BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (280 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P17410 HTH-type transcriptional regulator chbR n=135 Ta... 578 e-164 UniRef50_D2TGS1 Chb operon repressor n=15 Tax=Enterobacteriaceae... 514 e-144 UniRef50_C4X747 Negative transcriptional regulator of cel operon... 479 e-134 UniRef50_C6D149 Transcriptional regulator, AraC family n=1 Tax=P... 92 1e-17 UniRef50_Q28QP5 Transcriptional regulator, AraC family n=1 Tax=J... 89 2e-16 UniRef50_C6J3J7 Transcriptional regulator n=1 Tax=Paenibacillus ... 87 4e-16 UniRef50_C0CUZ1 Putative uncharacterized protein n=1 Tax=Clostri... 86 1e-15 UniRef50_D1N7W9 Transcriptional regulator, AraC family n=1 Tax=V... 85 3e-15 UniRef50_B1ZSX4 Transcriptional regulator, AraC family n=1 Tax=O... 84 7e-15 UniRef50_C6D720 Transcriptional regulator, AraC family n=2 Tax=B... 82 2e-14 UniRef50_C9LA22 Transcriptional regulator, AraC family n=2 Tax=C... 78 3e-13 UniRef50_C5EKJ0 Predicted protein n=1 Tax=Clostridiales bacteriu... 75 2e-12 UniRef50_C6J044 Transcriptional regulator n=1 Tax=Paenibacillus ... 75 3e-12 UniRef50_D1N6W7 Transcriptional regulator, AraC family n=1 Tax=V... 75 3e-12 UniRef50_C0EDH7 Putative uncharacterized protein n=1 Tax=Clostri... 74 4e-12 UniRef50_A3V1A1 Transcriptional regulator n=2 Tax=Rhodobacterace... 74 6e-12 UniRef50_C0E9Q1 Putative uncharacterized protein n=1 Tax=Clostri... 74 6e-12 UniRef50_A8SCU0 Putative uncharacterized protein n=1 Tax=Faecali... 73 8e-12 UniRef50_A8RPB8 Putative uncharacterized protein n=1 Tax=Clostri... 73 1e-11 UniRef50_Q0TS97 Transcriptional regulator, AraC family n=6 Tax=C... 72 2e-11 UniRef50_C6J2X2 Predicted protein n=1 Tax=Paenibacillus sp. oral... 72 3e-11 UniRef50_C6LBG3 Transcriptional regulator, AraC/XylS family n=2 ... 72 3e-11 UniRef50_B4AEM1 Transcriptional regulator n=1 Tax=Bacillus pumil... 72 3e-11 UniRef50_C0EGR3 Putative uncharacterized protein n=1 Tax=Clostri... 71 3e-11 UniRef50_B0MEI4 Putative uncharacterized protein n=1 Tax=Anaeros... 71 3e-11 UniRef50_C7IFZ3 Transcriptional regulator, AraC family n=1 Tax=C... 71 4e-11 UniRef50_Q8EL34 Hypothetical conserved protein n=1 Tax=Oceanobac... 70 6e-11 UniRef50_B7I0Q9 Transcriptional regulator, AraC family protein n... 70 1e-10 UniRef50_C7PAR8 Transcriptional regulator, AraC family n=1 Tax=C... 70 1e-10 UniRef50_C6IIU9 Transcriptional regulator n=2 Tax=Bacteroides Re... 69 1e-10 UniRef50_Q5WCU1 AraC/XylS family transcriptional regulator n=1 T... 69 1e-10 UniRef50_C6W763 Transcriptional regulator, AraC family n=1 Tax=D... 69 2e-10 UniRef50_C0EDI6 Putative uncharacterized protein n=2 Tax=Clostri... 69 2e-10 UniRef50_A5ZUG1 Putative uncharacterized protein n=1 Tax=Ruminoc... 69 2e-10 UniRef50_A4EK09 Transcriptional regulator, AraC family protein n... 68 3e-10 UniRef50_A0AET6 Complete genome n=16 Tax=Listeria RepID=A0AET6_L... 68 4e-10 UniRef50_C0ECN2 Putative uncharacterized protein n=1 Tax=Clostri... 67 5e-10 UniRef50_C6W159 Transcriptional regulator, AraC family n=1 Tax=D... 67 5e-10 UniRef50_C6D8V3 Transcriptional regulator, AraC family n=1 Tax=P... 67 6e-10 UniRef50_C0EGI4 Putative uncharacterized protein n=1 Tax=Clostri... 67 9e-10 UniRef50_C5RE92 Transcriptional regulator, AraC family n=3 Tax=C... 67 9e-10 UniRef50_B2TRB4 Transcriptional regulator, AraC family n=5 Tax=C... 67 9e-10 UniRef50_C0Z7V8 Probable transcriptional regulator n=1 Tax=Brevi... 66 1e-09 UniRef50_C0EDW5 Putative uncharacterized protein n=1 Tax=Clostri... 66 1e-09 UniRef50_A8FAK6 AraC family transcriptional regulator n=2 Tax=Ba... 66 1e-09 UniRef50_C0EIL7 Putative uncharacterized protein n=1 Tax=Clostri... 66 1e-09 UniRef50_B6FJS0 Putative uncharacterized protein n=2 Tax=Clostri... 66 2e-09 UniRef50_C1I2I2 Transcriptional regulator n=1 Tax=Clostridium sp... 65 2e-09 UniRef50_D2MNX8 Transcriptional regulator, AraC family n=1 Tax=B... 65 3e-09 UniRef50_C6D083 Transcriptional regulator, AraC family n=1 Tax=P... 65 3e-09 UniRef50_Q0TRX2 DNA-bindng response regulator, AraC family n=12 ... 65 3e-09 UniRef50_C0EGN7 Putative uncharacterized protein n=1 Tax=Clostri... 65 3e-09 UniRef50_C6L914 Transcriptional regulator, AraC family n=1 Tax=B... 65 3e-09 UniRef50_A7B562 Putative uncharacterized protein n=2 Tax=Clostri... 65 3e-09 UniRef50_C4Z7U7 LacI family transcriptional regulator n=1 Tax=Eu... 65 3e-09 UniRef50_C8ZX65 Transcriptional regulator n=1 Tax=Enterococcus g... 65 4e-09 UniRef50_C7H4U6 Transcriptional regulator, AraC family n=1 Tax=F... 65 4e-09 UniRef50_P96660 Uncharacterized HTH-type transcriptional regulat... 64 4e-09 UniRef50_A5N4U3 Predicted transcriptional regulator n=2 Tax=Clos... 64 4e-09 UniRef50_Q485B0 Transcriptional regulator, araC family n=1 Tax=C... 64 5e-09 UniRef50_A9KRL7 Transcriptional regulator, AraC family n=1 Tax=C... 64 5e-09 UniRef50_Q7UYE3 L-rhamnose operon transcriptional activator n=1 ... 64 6e-09 UniRef50_C0ABA0 L-rhamnose operon transcriptional activator n=1 ... 64 8e-09 UniRef50_C6JFK6 Transcriptional regulator n=1 Tax=Ruminococcus s... 64 8e-09 UniRef50_C6PNM8 Transcriptional regulator, AraC family n=1 Tax=C... 64 8e-09 UniRef50_Q5WIZ4 Putative uncharacterized protein n=1 Tax=Bacillu... 63 9e-09 UniRef50_C6J8U5 Putative uncharacterized protein n=1 Tax=Ruminoc... 63 9e-09 UniRef50_C1D3S3 Putative transcriptional regulator, AraC family ... 63 1e-08 UniRef50_C6W740 Transcriptional regulator, AraC family n=1 Tax=D... 63 1e-08 UniRef50_Q39TN8 Two component transcriptional regulator, AraC fa... 62 1e-08 UniRef50_B6VMW0 Similar to arac-family transcriptional regulator... 62 2e-08 UniRef50_UPI00019047EB transcriptional regulator n=1 Tax=Rhizobi... 62 2e-08 UniRef50_A8SS52 Putative uncharacterized protein n=1 Tax=Coproco... 62 2e-08 UniRef50_C4G7L2 Putative uncharacterized protein n=1 Tax=Abiotro... 62 2e-08 UniRef50_D1T9I8 AraC family transcriptional regulator n=1 Tax=Bu... 62 2e-08 UniRef50_C9KN97 Putative AraC-type DNA-binding domain-containing... 62 2e-08 UniRef50_A7B0Y7 Putative uncharacterized protein n=1 Tax=Ruminoc... 62 2e-08 UniRef50_UPI0001788EB0 transcriptional regulator, AraC family n=... 62 2e-08 UniRef50_Q9KBY8 Transcriptional regulator (AraC/XylS family) n=1... 62 3e-08 UniRef50_A4A7R1 AraC-family transcriptional regulator n=2 Tax=un... 62 3e-08 UniRef50_C6JD68 Transcriptional regulator n=1 Tax=Ruminococcus s... 62 3e-08 UniRef50_Q5WL10 AraC/XylS family transcriptional regulator n=1 T... 62 3e-08 UniRef50_A5GD53 Transcriptional regulator, AraC family n=1 Tax=G... 62 3e-08 UniRef50_C0EG54 Putative uncharacterized protein n=1 Tax=Clostri... 62 3e-08 UniRef50_Q2CI77 Transcriptional regulator n=4 Tax=Rhodobacterace... 62 3e-08 UniRef50_B7DQ49 Transcriptional regulator, AraC family n=1 Tax=A... 62 3e-08 UniRef50_Q93PA7 MS124, putative transcriptional activator n=1 Ta... 61 3e-08 UniRef50_UPI0001C37EF8 AraC family transcriptional regulator n=1... 61 3e-08 UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostri... 61 3e-08 UniRef50_C8NIW5 AraC family transcriptional regulator n=2 Tax=Gr... 61 4e-08 UniRef50_C7PA24 Transcriptional regulator, AraC family n=1 Tax=C... 61 5e-08 UniRef50_C6JCM1 Putative uncharacterized protein n=1 Tax=Ruminoc... 61 5e-08 UniRef50_UPI000178960C transcriptional regulator, AraC family n=... 61 5e-08 UniRef50_A8GCV2 Transcriptional regulator, AraC family n=18 Tax=... 61 5e-08 UniRef50_B1MLH4 Probable transcriptional regulator, AraC family ... 61 5e-08 UniRef50_C7PIS8 Transcriptional regulator, AraC family n=1 Tax=C... 61 5e-08 UniRef50_B9IXY7 Transcriptional regulator, AraC/XylS family n=7 ... 61 5e-08 UniRef50_B1QXT7 Transcriptional regulator, AraC family n=3 Tax=C... 61 5e-08 UniRef50_Q4V1B1 MSM (Multiple sugar metabolism) operon regulator... 60 6e-08 UniRef50_Q21KB5 Transcriptional regulator, AraC family with amid... 60 6e-08 UniRef50_C9KMM0 Putative AraC-type DNA-binding domain-containing... 60 6e-08 UniRef50_C6LL87 Transcriptional regulator, AraC family n=1 Tax=B... 60 8e-08 UniRef50_C8NDY5 AraC family DNA-binding response regulator n=1 T... 60 8e-08 UniRef50_D1CGI0 Transcriptional regulator, AraC family n=1 Tax=T... 60 9e-08 UniRef50_C0WDW3 Predicted protein n=2 Tax=Acidaminococcus sp. D2... 60 9e-08 UniRef50_C0EAQ5 Putative uncharacterized protein n=1 Tax=Clostri... 60 9e-08 UniRef50_A7VQ18 Putative uncharacterized protein n=1 Tax=Clostri... 60 9e-08 UniRef50_C9KMM6 Putative AraC-type DNA-binding domain-containing... 60 1e-07 UniRef50_C0EGL1 Putative uncharacterized protein n=1 Tax=Clostri... 60 1e-07 UniRef50_UPI0001C373B4 transcriptional regulator, AraC family pr... 60 1e-07 UniRef50_A4VLS2 Transcriptional regulator n=6 Tax=Pseudomonas Re... 60 1e-07 UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacte... 60 1e-07 UniRef50_B1MCK7 Putative transcription regulator, AraC family n=... 60 1e-07 UniRef50_B0MSM8 Putative uncharacterized protein n=1 Tax=Alistip... 59 1e-07 UniRef50_C3HF38 Putative uncharacterized protein n=1 Tax=Bacillu... 59 1e-07 UniRef50_UPI0001C368B4 two-component response regulator n=1 Tax=... 59 1e-07 UniRef50_A7VU88 Putative uncharacterized protein n=1 Tax=Clostri... 59 1e-07 UniRef50_B0A8H8 Putative uncharacterized protein n=1 Tax=Clostri... 59 1e-07 UniRef50_C0CH60 Putative uncharacterized protein n=1 Tax=Blautia... 59 1e-07 UniRef50_C6D3K3 Transcriptional regulator, AraC family n=1 Tax=P... 59 2e-07 UniRef50_Q11HY1 Transcriptional regulator, AraC family with amid... 59 2e-07 UniRef50_UPI000174610C response regulator receiver domain protei... 59 2e-07 UniRef50_UPI0001C365A9 transcriptional regulator, AraC family pr... 59 2e-07 UniRef50_A7LYG4 Sensor protein n=7 Tax=Bacteroides RepID=A7LYG4_... 59 2e-07 UniRef50_B9QTE2 DJ-1/PfpI family n=1 Tax=Labrenzia alexandrii DF... 59 2e-07 UniRef50_B2TM72 AraC-family transcriptional regulator n=3 Tax=Cl... 59 2e-07 UniRef50_B7CB27 Putative uncharacterized protein n=1 Tax=Eubacte... 59 2e-07 UniRef50_B1R1K3 Transcriptional regulator, AraC family n=2 Tax=C... 59 2e-07 UniRef50_C6XVV2 Helix-turn-helix-domain containing protein AraC ... 59 2e-07 UniRef50_C7H5Z6 Transcription regulator, AraC family n=2 Tax=Rum... 59 2e-07 UniRef50_Q4A0B7 Putative transcriptional regulator n=1 Tax=Staph... 59 2e-07 UniRef50_C0ZDD0 Probable transcriptional regulator n=1 Tax=Brevi... 59 2e-07 UniRef50_Q0C558 Transcriptional regulator, AraC family n=1 Tax=H... 59 2e-07 UniRef50_A6DJ96 Arabinose operon regulatory protein n=1 Tax=Lent... 59 2e-07 UniRef50_Q5WL40 AraC/XylS family transcriptional regulator n=1 T... 59 3e-07 UniRef50_A8S939 Putative uncharacterized protein n=1 Tax=Faecali... 59 3e-07 UniRef50_A8RL67 Putative uncharacterized protein n=1 Tax=Clostri... 58 3e-07 UniRef50_C0A382 AraC-type DNA-binding domain-containing protein-... 58 3e-07 UniRef50_D1PCF3 Putative two-component system sensor histidine k... 58 3e-07 UniRef50_A5V4G1 Transcriptional regulator, AraC family n=1 Tax=S... 58 3e-07 UniRef50_C0EDI9 Putative uncharacterized protein n=1 Tax=Clostri... 58 3e-07 UniRef50_C6CFY9 Transcriptional regulator, AraC family n=4 Tax=D... 58 3e-07 UniRef50_A9WH32 Sensor protein n=2 Tax=Chloroflexus RepID=A9WH32... 58 3e-07 UniRef50_UPI000178A007 transcriptional regulator, AraC family n=... 58 3e-07 UniRef50_UPI00017450D3 transcriptional regulator, AraC family pr... 58 3e-07 UniRef50_C0EGG6 Putative uncharacterized protein n=1 Tax=Clostri... 58 3e-07 UniRef50_A1KC76 Putative AraC family transcriptional regulator n... 58 3e-07 UniRef50_C6D0B3 Transcriptional regulator, AraC family n=1 Tax=P... 58 4e-07 UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=C... 58 4e-07 UniRef50_B8DF67 Methylphosphotriester-DNA alkyltransferase n=19 ... 58 4e-07 UniRef50_C2GWE4 AraC/XylS family transcriptional regulator n=4 T... 58 4e-07 UniRef50_B8FFF2 Transcriptional regulator, AraC family n=2 Tax=D... 57 5e-07 UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dict... 57 5e-07 UniRef50_A1S8K4 Transcriptional regulator, AraC family with amid... 57 5e-07 UniRef50_C3JXK6 AraC-family transcriptional regulator n=3 Tax=Ga... 57 5e-07 UniRef50_C7IE87 Transcriptional regulator, AraC family n=1 Tax=C... 57 5e-07 UniRef50_C6D1M1 Transcriptional regulator, AraC family n=2 Tax=B... 57 5e-07 UniRef50_A6M0N1 Response regulator receiver protein n=1 Tax=Clos... 57 5e-07 UniRef50_A3W1D7 Transcriptional regulator, AraC family protein n... 57 5e-07 UniRef50_D1N597 Transcriptional regulator, AraC family n=1 Tax=V... 57 5e-07 UniRef50_A2TYF7 Regulatory helix-turn-helix protein, AraC family... 57 5e-07 UniRef50_B5JMW9 Transcriptional regulator, AraC family protein n... 57 5e-07 UniRef50_UPI0000DAF41A hypothetical protein PaerPA_01003251 n=1 ... 57 5e-07 UniRef50_A6TKQ3 Helix-turn-helix-domain containing protein, AraC... 57 5e-07 UniRef50_UPI0001C35507 AraC family transcriptional regulator n=1... 57 6e-07 UniRef50_Q2SHV1 AraC-type DNA-binding domain-containing protein ... 57 6e-07 UniRef50_A8SGH8 Putative uncharacterized protein n=2 Tax=Bacteri... 57 6e-07 UniRef50_UPI0001787E19 transcriptional regulator, AraC family n=... 57 6e-07 UniRef50_C5D8H7 Two component transcriptional regulator, AraC fa... 57 6e-07 UniRef50_B5KB88 Transcriptional regulator, AraC family n=1 Tax=O... 57 6e-07 UniRef50_C4Z408 Two-component system, response regulator YesN n=... 57 6e-07 UniRef50_A3DIQ4 Transcriptional regulator, AraC family n=3 Tax=C... 57 6e-07 UniRef50_C9AAA4 Transcriptional regulator n=3 Tax=Enterococcus c... 57 6e-07 UniRef50_C1P8W3 Transcriptional regulator, AraC family n=1 Tax=B... 57 7e-07 UniRef50_B5JHR7 Transcriptional regulator, AraC family protein n... 57 7e-07 UniRef50_A5N5Q2 Transcriptional regulator n=3 Tax=Firmicutes Rep... 57 7e-07 UniRef50_C4Z413 AraC family transcriptional regulator, arabinose... 57 7e-07 UniRef50_D1QW91 Arabinose operon regulatory protein n=1 Tax=Prev... 57 7e-07 UniRef50_B4WW69 Transcriptional regulator, AraC family protein n... 57 7e-07 UniRef50_C1I9D8 Methylated-DNA-[protein]-cysteine S-methyltransf... 57 7e-07 UniRef50_C0FPB8 Putative uncharacterized protein n=1 Tax=Rosebur... 57 7e-07 UniRef50_B1HSI7 Transcriptional regulator, AraC family n=2 Tax=B... 57 8e-07 UniRef50_B8HZN5 Transcriptional regulator, AraC family n=2 Tax=B... 57 8e-07 UniRef50_C2CZA7 AraC family transcriptional regulator n=1 Tax=La... 57 8e-07 UniRef50_Q0VT12 Transcriptional regulator MmsR n=2 Tax=Alcanivor... 57 8e-07 UniRef50_D2LWT4 Transcriptional regulator, AraC family n=1 Tax=B... 57 9e-07 UniRef50_C6PBN1 Transcriptional regulator, AraC family n=1 Tax=T... 57 9e-07 UniRef50_Q2SQA4 Transcriptional regulator containing an amidase ... 57 9e-07 UniRef50_C3LC07 Transcriptional regulator, AraC family n=7 Tax=B... 57 9e-07 UniRef50_D0M881 AraC-type DNA-binding domain-containing protein ... 57 9e-07 UniRef50_A6TRZ8 Response regulator receiver protein n=1 Tax=Alka... 57 9e-07 UniRef50_A6DG33 Transcriptional regulator, AraC family protein n... 57 9e-07 UniRef50_Q11KV0 Transcriptional regulator, AraC family n=1 Tax=C... 57 1e-06 UniRef50_Q893H5 Transcriptional regulatory protein n=1 Tax=Clost... 57 1e-06 UniRef50_A0Q2M6 Transcriptional regulatory protein n=6 Tax=Clost... 57 1e-06 UniRef50_B3XR19 Transcriptional regulator, AraC family n=2 Tax=L... 56 1e-06 UniRef50_Q0ARR3 Transcriptional regulator, AraC family with amid... 56 1e-06 UniRef50_C6JJY6 Transcription regulator n=1 Tax=Fusobacterium va... 56 1e-06 UniRef50_B4WTP1 Transcriptional regulator, AraC family protein n... 56 1e-06 UniRef50_C4Z9T9 Ada regulatory protein/6-O-methylguanine-DNA met... 56 1e-06 UniRef50_C3R8A9 Sensor protein n=2 Tax=Bacteroides RepID=C3R8A9_... 56 1e-06 UniRef50_C6XTR7 Helix-turn-helix-domain containing protein AraC ... 56 1e-06 UniRef50_A8SV60 Putative uncharacterized protein n=1 Tax=Coproco... 56 1e-06 UniRef50_A8S1Q1 Putative uncharacterized protein n=3 Tax=Clostri... 56 1e-06 UniRef50_Q2SNN6 Transcriptional regulator containing an amidase ... 56 1e-06 UniRef50_C9RVZ3 Two component transcriptional regulator, AraC fa... 56 1e-06 UniRef50_P45008 Uncharacterized HTH-type transcriptional regulat... 56 1e-06 UniRef50_UPI0001787EF3 transcriptional regulator, AraC family n=... 56 1e-06 UniRef50_Q8YSB8 Transcriptional regulator n=2 Tax=Nostocaceae Re... 56 1e-06 UniRef50_C6D4D7 Transcriptional regulator, AraC family n=3 Tax=F... 56 1e-06 UniRef50_B2HU78 AraC-type DNA-binding domain-containing protein ... 56 1e-06 UniRef50_UPI0001BC2F1F 2-isopropylmalate synthase n=1 Tax=Butyri... 56 2e-06 UniRef50_A7VNA5 Putative uncharacterized protein n=1 Tax=Clostri... 56 2e-06 UniRef50_C6D2P5 Transcriptional regulator, AraC family n=1 Tax=P... 56 2e-06 UniRef50_D2EHC6 Transcriptional regulator n=1 Tax=Pediococcus ac... 56 2e-06 UniRef50_A9E3W0 Polyphosphate kinase n=1 Tax=Kordia algicida OT-... 56 2e-06 UniRef50_C7R5W7 Transcriptional regulator, AraC family n=1 Tax=K... 56 2e-06 UniRef50_Q0SUF5 Transcriptional regulator, AraC family n=4 Tax=C... 56 2e-06 UniRef50_UPI000197BA84 hypothetical protein BACCOPRO_03194 n=1 T... 56 2e-06 UniRef50_A0LXA2 Sensor protein n=1 Tax=Gramella forsetii KT0803 ... 56 2e-06 UniRef50_Q8NYT6 Uncharacterized HTH-type transcriptional regulat... 56 2e-06 UniRef50_B1XRF4 Transcriptional regulator, AraC family n=1 Tax=S... 56 2e-06 UniRef50_Q15ZQ2 Transcriptional regulator, AraC family with amid... 55 2e-06 UniRef50_A5G651 Two component transcriptional regulator, AraC fa... 55 2e-06 UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=P... 55 2e-06 UniRef50_C5EHH5 Predicted protein n=1 Tax=Clostridiales bacteriu... 55 2e-06 UniRef50_Q0I0N1 Transcriptional regulator, AraC family with amid... 55 2e-06 UniRef50_B0C647 Transcriptional Regulator, AraC family n=1 Tax=A... 55 2e-06 UniRef50_C0AAT3 AraC-type DNA-binding domain-containing protein-... 55 2e-06 UniRef50_A8SR16 Putative uncharacterized protein n=1 Tax=Coproco... 55 2e-06 UniRef50_UPI0001C356F7 AraC family transcriptional regulator n=1... 55 2e-06 UniRef50_D2LZT6 Two component transcriptional regulator, AraC fa... 55 2e-06 UniRef50_C6JCU7 Transcriptional regulator n=3 Tax=Ruminococcus R... 55 2e-06 UniRef50_C6D8S9 Two component transcriptional regulator, AraC fa... 55 2e-06 UniRef50_A6TGX0 Regulation of superoxide response regulon n=6 Ta... 55 2e-06 UniRef50_A7B0C8 Putative uncharacterized protein n=1 Tax=Ruminoc... 55 2e-06 UniRef50_A9KSI4 Two component transcriptional regulator, AraC fa... 55 2e-06 UniRef50_Q7P089 Probable transcriptional regulatory protein n=1 ... 55 2e-06 UniRef50_C2Z9K1 Transcriptional regulator, AraC n=2 Tax=Bacillus... 55 2e-06 UniRef50_C4GA22 Putative uncharacterized protein n=1 Tax=Shuttle... 55 2e-06 UniRef50_Q393N4 Transcriptional regulator, AraC family with amid... 55 2e-06 UniRef50_C6BZC3 Transcriptional regulator, AraC family n=1 Tax=D... 55 2e-06 UniRef50_B9CPJ5 Putative transcriptional regulator n=1 Tax=Staph... 55 2e-06 UniRef50_UPI0001788C4E two component transcriptional regulator, ... 55 2e-06 UniRef50_C5RQN6 Transcriptional regulator, AraC family n=1 Tax=C... 55 2e-06 UniRef50_UPI0001788D00 transcriptional regulator, AraC family n=... 55 3e-06 UniRef50_C4FY13 Putative uncharacterized protein n=1 Tax=Catonel... 55 3e-06 UniRef50_Q1VVA7 AraC-type DNA-binding domain-containing protein ... 55 3e-06 UniRef50_D2B8T9 AraC/XylS family transcriptional regulator n=4 T... 55 3e-06 UniRef50_A9KKI7 Two component transcriptional regulator, AraC fa... 55 3e-06 >UniRef50_P17410 HTH-type transcriptional regulator chbR n=135 Tax=Enterobacteriaceae RepID=CHBR_ECOLI Length = 280 Score = 578 bits (1491), Expect = e-164, Method: Compositional matrix adjust. Identities = 279/280 (99%), Positives = 279/280 (99%) Query: 1 MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEIN 60 MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEIN Sbjct: 1 MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEIN 60 Query: 61 GKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYR 120 GKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYR Sbjct: 61 GKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYR 120 Query: 121 TNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEK 180 TNNAFLTYVETVISSLN RETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEK Sbjct: 121 TNNAFLTYVETVISSLNFRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEK 180 Query: 181 MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYS 240 MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYS Sbjct: 181 MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYS 240 Query: 241 VTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 VTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ Sbjct: 241 VTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 >UniRef50_D2TGS1 Chb operon repressor n=15 Tax=Enterobacteriaceae RepID=D2TGS1_CITRO Length = 282 Score = 514 bits (1324), Expect = e-144, Method: Compositional matrix adjust. Identities = 241/279 (86%), Positives = 261/279 (93%) Query: 2 MQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEING 61 +Q APEI A EQQLFNGKNFHVFIYNKTES GLHQHDYYEFTLVLTGRY+QEING Sbjct: 4 LQATATAPEITVAHEQQLFNGKNFHVFIYNKTESACGLHQHDYYEFTLVLTGRYYQEING 63 Query: 62 KRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRT 121 KRVLLERGDFVFIPLGSHHQSFYEFG+TRILNVGISK FFEQHY PL+PYCFVASQVYR Sbjct: 64 KRVLLERGDFVFIPLGSHHQSFYEFGSTRILNVGISKHFFEQHYSPLMPYCFVASQVYRI 123 Query: 122 NNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM 181 N+AFLTYVETV++SLN R+TGLEEFVE+VTFY+INRLRHYREEQV DD+PQWLK+TVE M Sbjct: 124 NSAFLTYVETVVASLNFRDTGLEEFVEVVTFYIINRLRHYREEQVPDDIPQWLKATVETM 183 Query: 182 HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSV 241 H+KEQF E+ALENM+ALSAKSQEYLTRATQRYY KTPMQ+INEIRINFAKKQLEMTNYSV Sbjct: 184 HNKEQFGENALENMIALSAKSQEYLTRATQRYYRKTPMQLINEIRINFAKKQLEMTNYSV 243 Query: 242 TDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 TDIAFEAGYSSPSLFIKTFKK+TSFTP SYRKKLT+++Q Sbjct: 244 TDIAFEAGYSSPSLFIKTFKKMTSFTPNSYRKKLTQYSQ 282 >UniRef50_C4X747 Negative transcriptional regulator of cel operon n=8 Tax=Enterobacteriaceae RepID=C4X747_KLEPN Length = 279 Score = 479 bits (1232), Expect = e-134, Method: Compositional matrix adjust. Identities = 227/279 (81%), Positives = 250/279 (89%) Query: 1 MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEIN 60 M QP + EI+TAREQQLFNGKNFHV IYNKTES+SGLHQHDYYEFT+VLTGRY+QEIN Sbjct: 1 MRQPRMMTTEISTAREQQLFNGKNFHVVIYNKTESVSGLHQHDYYEFTVVLTGRYYQEIN 60 Query: 61 GKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYR 120 GKRVLLERGDFVFIP+GSHHQSFYEFGATRILNVGIS+RFFE+HYLPLLP+ VASQVY Sbjct: 61 GKRVLLERGDFVFIPMGSHHQSFYEFGATRILNVGISRRFFEKHYLPLLPFGLVASQVYA 120 Query: 121 TNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEK 180 +AFL YVE+VI+SLN RET +EF+E+V+FYVINRLRHYREE V D PQWLK+TVE Sbjct: 121 VQSAFLGYVESVIASLNFRETEFDEFIELVSFYVINRLRHYREEPVADVTPQWLKNTVEA 180 Query: 181 MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYS 240 MHDK +F E ALENMV LS K+QEYLTRATQRYYGKTPMQIIN+IRINFAKKQLE+TNYS Sbjct: 181 MHDKLKFGEGALENMVRLSGKTQEYLTRATQRYYGKTPMQIINDIRINFAKKQLEITNYS 240 Query: 241 VTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFN 279 VTDIA+E+GYSSPSLFIKTFKKLTSFTP SYRK LT N Sbjct: 241 VTDIAYESGYSSPSLFIKTFKKLTSFTPSSYRKHLTSIN 279 >UniRef50_C6D149 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D149_PAESJ Length = 279 Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 76/279 (27%), Positives = 117/279 (41%), Gaps = 15/279 (5%) Query: 6 INAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVL 65 +N P + A NFH I + LH HD+YE +V++G+ +NG L Sbjct: 1 MNVPMLYAAALIDPLVQSNFH--IVHSVRHAYPLHGHDFYEIFIVISGQCTHLVNGDTQL 58 Query: 66 LERGDFVFI-PLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNA 124 L G VFI P +H E G R LNV K E + + F + Sbjct: 59 LREGAMVFIRPDDTHSYDLLEGGDCRFLNVNFYKEVVEGAFDYIGHAAFAQALRSPQLPP 118 Query: 125 FLTYVETVISSLNLRETGLEEFVE--------MVTFYVINRLRHYREEQVIDD---VPQW 173 F+ T + +L + ++ F M ++ + L H+ E D +PQW Sbjct: 119 FIMLPGTDMEALMRKSEQIQLFNSTDKQKARTMARSFLSDALTHFFLEFRNDGTQAMPQW 178 Query: 174 LKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQ 233 + ++ KE FS + L + L+ +S +L R ++Y TP +N +R+ AK Sbjct: 179 FDHLLAQLQRKENFS-AGLPRLRELTDRSDGHLNRVFKQYLRMTPTAYLNHLRLGHAKNL 237 Query: 234 LEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 L T + DIA+EAG+ + S F FK P R Sbjct: 238 LLTTQLPIVDIAYEAGFDNLSHFYHLFKDAYGIAPGKIR 276 >UniRef50_Q28QP5 Transcriptional regulator, AraC family n=1 Tax=Jannaschia sp. CCS1 RepID=Q28QP5_JANSC Length = 284 Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 75/275 (27%), Positives = 117/275 (42%), Gaps = 31/275 (11%) Query: 19 LFNGKNFHVFIYNKTESISGL-HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFI-PL 76 L G+ FH +E+ L H HDYYE L+ G+ + ING +LE G VF+ P Sbjct: 14 LSPGEAFHFVRKELSEASPVLEHDHDYYELFLIQQGQVYHWINGLEEMLEPGHMVFVRPS 73 Query: 77 GSHHQSFYEFGATRILNVG----------------ISKRFFEQHYLPLLPYCFVASQVYR 120 H +ILNV RFF Q + Q R Sbjct: 74 DRHALQGAPGTGAKILNVMFRTQTAAHLVTRYADVFGGRFFWQPGPLPVTLRLHGPQRER 133 Query: 121 TNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDD-VPQWLKSTVE 179 N+ LT ++T +L +E F+ V +V++ +++D P WL Sbjct: 134 AINSMLT-LDTSFRNL----ARIELFLLSVMTHVLD------TGEIVDGRAPGWLLQACH 182 Query: 180 KMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNY 239 + F + A + + + +SQ ++ R +RY G +P Q +N IRI A L T Sbjct: 183 AAREPRVFRQGA-DGFLHAAGRSQAHVCRQARRYLGLSPTQYVNRIRIQHAAMLLAGTER 241 Query: 240 SVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 + DIA + G+ + S F + F++ TP+ YR + Sbjct: 242 GLPDIAADCGFENLSYFHRLFREQYGTTPRGYRHR 276 >UniRef50_C6J3J7 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J3J7_9BACL Length = 281 Score = 87.4 bits (215), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 73/268 (27%), Positives = 119/268 (44%), Gaps = 33/268 (12%) Query: 26 HVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFI-PLGSHHQSFY 84 H F E S +H HD+YE LV G+ +NG+ V + G VFI P H Sbjct: 22 HFFTVPSLEYASPIHCHDFYELFLVTQGQALHIVNGEAVPITEGTLVFIRPQDIHCYEKL 81 Query: 85 EFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETG-- 142 + +N+ ++ + + F+ S + N + +V+ + L TG Sbjct: 82 QEHDCEFINLCYTREVIHE------VFAFLGSSITPEN-----LLSSVLPPVTLLSTGEK 130 Query: 143 --LEEFVEMVTFY-----VINRLRHYREEQVID-----------DVPQWLKSTVEKMHDK 184 L + +E + V LR E +I P WL+S + +M K Sbjct: 131 ERLTDRLERINLVQDQLQVAGLLRAVLVELLIQYFWKYQQTDTKAYPLWLESLLLQMQRK 190 Query: 185 EQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDI 244 E FSE ++ M LS +S ++ R + TP++ IN +R+++AK L T ++TDI Sbjct: 191 ENFSE-GVQRMYELSERSPGHINRVFRSLLHTTPVEYINRLRLDYAKHMLVTTRLNITDI 249 Query: 245 AFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 A AG+++ S + FKK TP ++R Sbjct: 250 ALSAGFNNLSHYYHLFKKEFGITPLAFR 277 >UniRef50_C0CUZ1 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CUZ1_9CLOT Length = 312 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 70/256 (27%), Positives = 119/256 (46%), Gaps = 12/256 (4%) Query: 28 FIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG 87 FI ++ + + +H H YYE +V G IN L G F+ H Sbjct: 23 FITDRRQLVK-IHCHSYYEIFIVAQGYGTHLINSTSEPLSPGALYFVRPDDVHCYMDVTS 81 Query: 88 ATRILNVGISKRFFEQ--HYLP-------LLPYCFVASQV-YRTNNAFLTYVETVISSLN 137 +I+N+ + + F++ YL L P C QV + + LT +E ++ + Sbjct: 82 NFKIINMIVPEDTFDRLTQYLGGTFRDDLLSPPCPPHVQVSMKEFKSILTELEQLVLTKK 141 Query: 138 LRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVA 197 + + + F + F ++ + ++ P+WL+ +M KE F E L + Sbjct: 142 ILKEKSDVFFRITVFGLLTKYFVLSPQKSSGRTPEWLRWLSLEMLKKENFVE-GLPALYR 200 Query: 198 LSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFI 257 LS KS E+L+RA ++Y K+P Q+IN+IR+ + QL+ T+ V I +AG+ S S F Sbjct: 201 LSGKSIEHLSRACRKYLQKSPTQLINDIRLEYVVNQLQNTDEKVIAICEDAGFDSLSHFY 260 Query: 258 KTFKKLTSFTPKSYRK 273 FK+ +P +RK Sbjct: 261 HIFKQAYGMSPAQFRK 276 >UniRef50_D1N7W9 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N7W9_9BACT Length = 317 Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 73/286 (25%), Positives = 122/286 (42%), Gaps = 37/286 (12%) Query: 13 TAREQQLF-NGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDF 71 R+Q +G N H ++ H H++ E +L+G +NG++ LLE Sbjct: 37 AGRKQSFIPSGGNLHYHSLPSGGTVE--HSHEFGELIFLLSGSIIHRVNGEKQLLEPNSV 94 Query: 72 VFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFL-TYVE 130 VF+ H GA + +S V Y ++AFL Y E Sbjct: 95 VFVRPDDRHGFLPAPGAPDCELLLLSFHLELF----------VTISRYLEDDAFLHRYTE 144 Query: 131 TVISSL----------------NLRETGLEEFVEMVTFYVINR---LRHYREEQVI---D 168 +V+ ++ +L G+ + + F V+ R + ++ Sbjct: 145 SVLPAVFRVPESRMNELSLELLSLNAQGITPAIRKIRFKVLLAELFTRFFLPQEAAPGSS 204 Query: 169 DVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRIN 228 D P+WL+S EKM E F L+ M LS + EYL + +++ ++P + INE+RIN Sbjct: 205 DAPEWLESLCEKMKTPENFI-PGLKRMQQLSGYTPEYLCKVFRKHLDRSPTEFINELRIN 263 Query: 229 FAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 A + L + S+ ++A+ + S S F F+K S TP YRK+ Sbjct: 264 HAARLLADSGESIAELAYRLNFQSLSRFYHLFRKQYSCTPAEYRKR 309 >UniRef50_B1ZSX4 Transcriptional regulator, AraC family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZSX4_OPITP Length = 279 Score = 83.6 bits (205), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 63/250 (25%), Positives = 106/250 (42%), Gaps = 21/250 (8%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFI-PLGSHH-QSFYEFGATRILNVGI 96 LH HDY E V G +NG L RG VFI PL HH E G T + N + Sbjct: 32 LHDHDYPEVFWVSEGVMRHTVNGVTTELGRGRLVFIRPLDRHHFLGAGENGGT-VCNFAL 90 Query: 97 SKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVIN 156 + A + + A V+ + L + E + T + + Sbjct: 91 RRDLLAAARRRYFARHRGA---WWHDAAMPLGVQLSGAELRALDQAARELASLRTLTIAD 147 Query: 157 ------------RLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQE 204 R R E Q + P WL + ++ D ++ + + +V L+ S E Sbjct: 148 VDRFLLNLFHLLREREAPERQATE--PAWLAAARRELSDPQKLA-GGVNQLVRLAGCSPE 204 Query: 205 YLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLT 264 +L R +R +G TP ++N R+++A +L+ ++ ++ DI+ AG+ S S F F++ Sbjct: 205 HLARMVRRVHGVTPTDLVNAQRLDWAAVELQFSSRAIADISLAAGFESLSHFYHLFRRQH 264 Query: 265 SFTPKSYRKK 274 TP+ +R + Sbjct: 265 GVTPRQFRLR 274 >UniRef50_C6D720 Transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6D720_PAESJ Length = 289 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 66/257 (25%), Positives = 115/257 (44%), Gaps = 30/257 (11%) Query: 38 GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFI---PLGSHHQSFYEFGATRILNV 94 GLH HD++E L+L G ++NG R LL VFI + S+ Q+ G + +N+ Sbjct: 29 GLHTHDFFELFLILQGSVVHKVNGTRQLLRENTLVFIRDRDVHSYEQT--SEGDCQFINL 86 Query: 95 GISKRFFEQHYL-------------PLLPYCFVASQVYRTNNAFLTYVETVISSLNLRET 141 K ++ + P LP + S+ + YV + +NL Sbjct: 87 SFYKEVIDELFAFLGAGFPSGKLFEPELPPTLLLSKTEKE------YVRYRLDQINLTPL 140 Query: 142 GLEEFVEMVTFYVINRL--RHYREEQVIDDV---PQWLKSTVEKMHDKEQFSESALENMV 196 + V+ ++ L R+ R D+ P W + ++M KE F+ ++ Sbjct: 141 SQKLVVKAEVRALLTDLFFRYIRITAEKDEPYGQPDWFLALCQEMRKKEHFTRGT-SALL 199 Query: 197 ALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLF 256 LS KS YL R ++ +P + IN++R+++A+ L T+ + DI+ E G + S F Sbjct: 200 QLSGKSHAYLCRVFKQQLRISPTRFINDLRLSYAENLLLNTDMDILDISLETGLENVSYF 259 Query: 257 IKTFKKLTSFTPKSYRK 273 + FK+ TP +R+ Sbjct: 260 YELFKRKHRMTPHRFRQ 276 >UniRef50_C9LA22 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C9LA22_RUMHA Length = 277 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 63/244 (25%), Positives = 119/244 (48%), Gaps = 15/244 (6%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSF------YEFGATRILN 93 H H + E V G + +I GK++ +++ D + I H F +E+ A I Sbjct: 37 HSHYFSELFFVTKGTGYFQIEGKQIPVQKNDLILINPNIPHTEFGNKEQPWEYIALGI-- 94 Query: 94 VGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVE-MVTF 152 G+ ++ E+ PY + + R + Y+ T++ + ++ G + + ++ Sbjct: 95 EGVQFQYSEKE----APYSYSVFSLSREHREIPWYLSTLVKEIQTQQEGYQTICQNLLEL 150 Query: 153 YVINRLRHYREEQVIDDVPQWLKST--VEKMHDKEQFSESALENMVALSAKSQEYLTRAT 210 +++ R R+E + + + VE+ ++ + L+ + AL ++ YL A Sbjct: 151 ILLSVARSTRQEFLSAPRQKTTRECRLVEQYINEHYHEDITLDTLSALVHINKYYLVHAF 210 Query: 211 QRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKS 270 + Y G +P+ + + R+ A+ LE TNYSVT I +G+SS S F +TF++LT TP + Sbjct: 211 KNYKGVSPINYLIQRRVEEARYLLESTNYSVTKIGEISGFSSQSYFSQTFRRLTGTTPNA 270 Query: 271 YRKK 274 YRKK Sbjct: 271 YRKK 274 >UniRef50_C5EKJ0 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EKJ0_9FIRM Length = 301 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 70/248 (28%), Positives = 105/248 (42%), Gaps = 26/248 (10%) Query: 42 HDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRIL---NVGISK 98 HD+YE LV +I G R L+ G I G H + A L + I Sbjct: 34 HDFYEIVLVTYRNLNLQICGNRFTLQPGGMALIRPGDIHSKSGKDNAHINLAFPSATIDA 93 Query: 99 RFF------EQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLN---------LRETGL 143 F E+ L LPY Q+ R L ++ + LN +R T Sbjct: 94 LFDYLCNEKERDGLKQLPY-VPPVQLSRPE---LLNIQEKMQLLNTIPPNECEKIRTTLR 149 Query: 144 EEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQ 203 ++VT Y + L + +PQWL S + E SE L+ + S+ Sbjct: 150 SILFDVVTHYFLPSLH---SNHIHQSIPQWLASALTLWQTGEHRSE-GLDFFCEHTGYSK 205 Query: 204 EYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKL 263 E++ R +R + P +N R+N+A L ++YSVTDIA+E+G+ SPS F TF+ Sbjct: 206 EHICRTFKRCFDMAPTVYLNRQRLNYAINLLLHSDYSVTDIAYESGFCSPSRFYHTFRNT 265 Query: 264 TSFTPKSY 271 +PK + Sbjct: 266 YGISPKQF 273 >UniRef50_C6J044 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J044_9BACL Length = 294 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 70/261 (26%), Positives = 114/261 (43%), Gaps = 35/261 (13%) Query: 36 ISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFI-PLGSHHQSFYEFGATRILNV 94 +S H HD+YEF ++ G +NG+ LL+ G VFI P H R NV Sbjct: 27 VSPEHTHDFYEFFVIEAGSCRHVVNGETQLLQAGCLVFIRPEDIHRYEQNGEEDCRFYNV 86 Query: 95 G-----------------ISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETV--ISS 135 I++R + H LP + S F+ E + +SS Sbjct: 87 PCRHSLMDEAMAFLGEEEIAERLLQSH----LPQVALLSPT--EVGEFVALFERIKLLSS 140 Query: 136 LNLRETGL---EEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESAL 192 ++ ++ L ++++T Y N +EE +P WL+ + KM KE L Sbjct: 141 IDKQKARLVLKSGLIDLLTRYFFNPNPVKQEE-----IPLWLEHALSKMQLKENL-HRGL 194 Query: 193 ENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSS 252 + LS +S ++ RA +RY +TP + +N+++++ A+ L T V +IA E G+ + Sbjct: 195 PALYELSGRSIGHVNRAFRRYLQQTPTEYLNQLKLSAARNLLLTTELRVVEIALECGFEN 254 Query: 253 PSLFIKTFKKLTSFTPKSYRK 273 S F FKK P R+ Sbjct: 255 VSHFYHQFKKWYHQAPLDLRR 275 >UniRef50_D1N6W7 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N6W7_9BACT Length = 290 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 54/251 (21%), Positives = 108/251 (43%), Gaps = 29/251 (11%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQ---------SFYEFGATR 90 H+HD++E +L+G E+NG+R L GD V+I H+ FY Sbjct: 33 HRHDFHEIFWILSGEAEHEVNGERSRLRHGDLVWIRPHDRHRVTGASRQPLQFYNLAFPA 92 Query: 91 ILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNA---FLTYVETVISSLNLRETGLEEFV 147 + ++ R+ E Y + ++N + E++ L+ GL Sbjct: 93 EIIGELTARYEEFRY------------YFGSDNRQPIMIPLSESLFEWLDRGAAGLRNNP 140 Query: 148 E---MVTFYVINRLRHYRE--EQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKS 202 E + +++N + P WL+ ++ + + + + L+ ++ Sbjct: 141 ESRLALDRFLMNLVGELSTMLANPYRRCPAWLQEAAAELERQPEHLKLGSRALAVLAGRT 200 Query: 203 QEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKK 262 E++ R +R+ G TP + +N R ++A + L ++ ++T IA++ G+ S S F F++ Sbjct: 201 PEHVARELRRFAGVTPSEAVNRARADYAARLLSGSDLTITQIAYQCGFGSLSGFFPAFRR 260 Query: 263 LTSFTPKSYRK 273 TP YR+ Sbjct: 261 FYGETPLEYRR 271 >UniRef50_C0EDH7 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDH7_9CLOT Length = 331 Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 68/276 (24%), Positives = 121/276 (43%), Gaps = 35/276 (12%) Query: 24 NFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSF 83 + H K S LH HDY+E V +G F +++ L +GD + + + H F Sbjct: 57 DLHGLPNAKNAEQSLLHNHDYFELMYVRSGSCFNVFESEKITLHQGDILLLNPNAKHDPF 116 Query: 84 YEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNL----- 138 + N+ +S+ FEQ LPLL S + +N F+ Y+ + + + Sbjct: 117 TTSEGDCLFNIMLSRELFEQSMLPLL------SDNHLISNFFVDYMYHINKTQDYLYFPS 170 Query: 139 RET-GLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENM-- 195 R T + F+E + IN+ + Y QVI+ L + + ++ +E ES++ N Sbjct: 171 RNTKAISPFLEEIILEYINKEQGYV--QVIESALVILFARLGRIFAQENHIESSVSNKLI 228 Query: 196 -------------VALSAKSQE------YLTRATQRYYGKTPMQIINEIRINFAKKQLEM 236 V LS+ + E YL++ +++ G++ I++ ++ AK LE Sbjct: 229 VDVIVYLNQHSADVTLSSLAAEFGYSSGYLSKLIRKHTGQSFTDILSNFKLEKAKHLLET 288 Query: 237 TNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 T +S +IA G+ S ++F+ TP S R Sbjct: 289 TAHSTDEIAQLTGFHDASYLSRSFRSKYGVTPSSCR 324 >UniRef50_A3V1A1 Transcriptional regulator n=2 Tax=Rhodobacteraceae RepID=A3V1A1_9RHOB Length = 277 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 65/253 (25%), Positives = 102/253 (40%), Gaps = 19/253 (7%) Query: 33 TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH----QSFYEFGA 88 E LH HD+YE V G+ + L G VF+ G H + + Sbjct: 26 AERPRALHGHDFYELFWVQNGKVRHHLPDGTQTLAEGSVVFLSPGQTHALQGRGEHALVV 85 Query: 89 TRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETV--ISSLNLRETGLEEF 146 + L+ + K ++H P L A ++ + + + ++ LN LE Sbjct: 86 SLCLHPALVKALVDRH--PSL-----AGHLFWSGKGIAQHHRDMRELAVLNHAAVQLER- 137 Query: 147 VEMVTFYVINRLRHYREEQVID----DVPQWLKSTVEKMHDKEQFSESALENMVALSAKS 202 T L E D D P WL S F + A +VAL+ K+ Sbjct: 138 SRCDTIAAEAFLLPLCAELTTDIYPADAPDWLISACRAARQPTVFRDGA-TGLVALTGKA 196 Query: 203 QEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKK 262 +++R+ ++++G TP IN IR++ A + L SV IA + G + S F K F+ Sbjct: 197 HPHVSRSMRKHFGMTPSDYINRIRMDHAARALTTDADSVGQIAADCGIPNMSHFHKLFRA 256 Query: 263 LTSFTPKSYRKKL 275 TP YR+KL Sbjct: 257 AFGDTPLQYRQKL 269 >UniRef50_C0E9Q1 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E9Q1_9CLOT Length = 333 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 63/261 (24%), Positives = 119/261 (45%), Gaps = 21/261 (8%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKR 99 H HD++E V +G++FQEING ++ +G + LG+ H+ + E + N+ I K Sbjct: 67 HSHDFFEIIYVYSGQFFQEINGISIVQNKGQSALLNLGAKHKVWVEHSDDIVFNILIRKS 126 Query: 100 FFEQHYLPL-----LPYCFVASQVYRTNNAFLTYVETVISSLN------LRETGLEEFV- 147 EQ +L L L F + +Y N+ + + L+ +RE +F+ Sbjct: 127 MVEQVFLQLISKNNLISSFFLNSLYGMNSKKNLLLFDQMEELDEIFCGIIREYYDRDFLY 186 Query: 148 ------EMVTFYVI-NRLRHYREEQVIDDVPQWLKSTVEKMHD--KEQFSESALENMVAL 198 +V + I R+ + R +Q +++ + +V KM D + ++ L+++ Sbjct: 187 EENIIGRLVQLFSIWARIYYKRNDQEKNEITEIENDSVIKMLDYIQSHYNTVTLDDLANY 246 Query: 199 SAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIK 258 S+ +++R + + + +I+N+++I A L T V I+ G+ S F K Sbjct: 247 LGYSRRHVSRLLKMHTNRNLSEIVNDLKIKNACIYLNNTGLPVDKISEIIGFKESSYFYK 306 Query: 259 TFKKLTSFTPKSYRKKLTEFN 279 FKK + YR+ L N Sbjct: 307 IFKKQMGCSISKYRQTLKTGN 327 >UniRef50_A8SCU0 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SCU0_9FIRM Length = 310 Score = 73.2 bits (178), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 69/284 (24%), Positives = 117/284 (41%), Gaps = 27/284 (9%) Query: 12 ATAREQQLFNGKNFHVFIYNKTESI--SGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 A REQ F + Y + S H H+ +EF L G ++N R+ L+ G Sbjct: 27 AAGREQTQHGSPLFPIACYAEDLSCFSVAWHWHEEFEFILAALGPIHVDVNKTRLTLQTG 86 Query: 70 DFVFIPLGSHHQSFYEFGATRI--------LNVGISKRFFEQHYLPLL----PYCFVASQ 117 VFI G+ H G + L G+ F+++ PLL P F+ + Sbjct: 87 QGVFINSGALHAVEPAEGRALLHSGVFQPRLVGGMDTVFWQKLIRPLLQPGTPPFFLLDE 146 Query: 118 VYRTNNAFLTYVETVISSLNLRETGLEEFVE---------MVTFYVINRLRHYREEQVID 168 L + + E V ++T V +++ +EQ+ Sbjct: 147 AVPWQRQVLLCLREAWKGVADEPFDYENRVRYHLTAALRLLITQCVSGKVKVSEQEQIAS 206 Query: 169 DVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRIN 228 + + + VE+ H E+ + L VALS + R+ +++ G TP+Q + + R+ Sbjct: 207 ERMKQMLRYVEE-HYAEELTVEKLAGCVALSESA---CLRSFRQFLGITPIQYVKQFRVE 262 Query: 229 FAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 A + L T ++ E G+S S FIKTF+++ TP+ YR Sbjct: 263 KAAELLRSTRLKTGEVGLECGFSDASYFIKTFREIKHCTPREYR 306 >UniRef50_A8RPB8 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RPB8_9CLOT Length = 335 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 55/251 (21%), Positives = 110/251 (43%), Gaps = 23/251 (9%) Query: 42 HDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGIS---- 97 HD+YE LV +N R+ L G+ + I G H + G + +N+ Sbjct: 82 HDFYEIILVTENSLDILLNNDRIKLGHGNLLLIRPGDIHTKI-QTGDSVHINLAFPAYTV 140 Query: 98 --------------KRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGL 143 K F + P++ + + + + +FL + + S + + T L Sbjct: 141 NSLFGYLYNSQAPRKELFAGSHSPIVRLSTIDTLMIQNRLSFLNQLSS--SDMEEKNTHL 198 Query: 144 EE-FVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKS 202 ++++ Y+I L + ++P WL +E + + + + ++ +V + +S Sbjct: 199 RAILIDIMYSYIIPELEKQKRSSDASNLPAWLVPALEGLSNPKNLT-MGMDYLVRQTQRS 257 Query: 203 QEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKK 262 E++ R +++ G TP IN R+N+A L T+ + D+ +E+G+ S + F FKK Sbjct: 258 PEHICRMFRKHLGITPSAYINGKRLNYAANLLIHTDMEIVDVIYESGFQSINYFYHLFKK 317 Query: 263 LTSFTPKSYRK 273 +P Y+K Sbjct: 318 EYGISPVKYKK 328 >UniRef50_Q0TS97 Transcriptional regulator, AraC family n=6 Tax=Clostridium RepID=Q0TS97_CLOP1 Length = 285 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 67/260 (25%), Positives = 112/260 (43%), Gaps = 36/260 (13%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH-----QSFYE---FGATRI 91 H H E +L G + I+ +++L ++ D +F+ G H YE F + Sbjct: 36 HWHTECEIIRILEGEFILFIDKEKILAKKNDIIFVHSGIFHGGLPNDCIYECIVFDMKLL 95 Query: 92 L--NVGISKRFFE--------QHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRET 141 L N +K+ ++ H LP S V NN ++ ++ ++ T Sbjct: 96 LKDNNACTKQIYDIVNHNKVIAHKLP--------SNVQALNNC----CTSLFEAMRVKST 143 Query: 142 GLEEFVEMVTFYVI-----NRLRHYREEQVIDDVPQWLK-STVEKMHDKEQFSESALENM 195 G E + +Y+I N+L + ++L+ V + + E + LE++ Sbjct: 144 GYEFIAQGALYYLIGTILENQLYVKNNKYTKKTKERFLQLKNVITLIENEYQNPLTLEDL 203 Query: 196 VALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSL 255 S S +Y R KTP++ +N RI + ++L T S+T+IA G++ S Sbjct: 204 SKASGMSPKYFCRFFHEMINKTPIEYLNYYRIEISCEKLLATELSITEIALNCGFNDVSY 263 Query: 256 FIKTFKKLTSFTPKSYRKKL 275 FIKTFKK TPK Y K L Sbjct: 264 FIKTFKKHKGVTPKQYLKSL 283 >UniRef50_C6J2X2 Predicted protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J2X2_9BACL Length = 751 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 41/114 (35%), Positives = 69/114 (60%), Gaps = 2/114 (1%) Query: 162 REEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQI 221 +E+++ D+V L +E +HDK S+ ++++M ++S YL+R + + G+T ++ Sbjct: 631 KEKKLEDNV--LLHQIIELLHDKYSDSQFSIQSMANHFSQSSSYLSRYFKEHTGRTVLEY 688 Query: 222 INEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 +N IRI+ AK+ L T +VT+I GYS PS FI+ FK TP YRK++ Sbjct: 689 LNGIRIDEAKRLLIETKLTVTEIVQRIGYSDPSSFIRKFKSEFQLTPGEYRKRM 742 >UniRef50_C6LBG3 Transcriptional regulator, AraC/XylS family n=2 Tax=Clostridiales RepID=C6LBG3_9FIRM Length = 259 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 73/261 (27%), Positives = 123/261 (47%), Gaps = 42/261 (16%) Query: 33 TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIP-LGSH--HQSFYEFGAT 89 T ++ G H+H +YE + G+ +N E DF+ IP + +H ++S Y Sbjct: 19 TRNVMG-HRHKHYELNFMTRGKTKMRLNESVFEYESYDFILIPPMVTHLLYESKYATFDN 77 Query: 90 RILNVGISKRF-FEQHYLPLLPYC----FVASQVYRTNNAFLTYVETVISSLNLRETGLE 144 ++ G+ + F + L Y F+ SQ+Y+T A +G+E Sbjct: 78 YVIWFGMKDQHPFTDKIIKLHDYDGEVQFLCSQIYKTYMA----------------SGME 121 Query: 145 EFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHD-KEQFSESALENMVA--LSAK 201 + E++ Y+ L H R+ +++ Q ++ HD EQ + EN+ LS K Sbjct: 122 K-AELINLYLKAVLYHMRDGVILNTRRQ-----LDDTHDLTEQVLKYISENIFRQRLSVK 175 Query: 202 --------SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSP 253 S E+L+R ++ G+ +Q +NE+RI AK+ LE N ++ +I+ Y+ P Sbjct: 176 AVADRFSISPEHLSRKFKKDTGENLIQYMNELRIAEAKRLLESQNLTIKEISAGLFYTDP 235 Query: 254 SLFIKTFKKLTSFTPKSYRKK 274 F K+FKKLT +P YRKK Sbjct: 236 FYFSKSFKKLTGCSPSEYRKK 256 >UniRef50_B4AEM1 Transcriptional regulator n=1 Tax=Bacillus pumilus ATCC 7061 RepID=B4AEM1_BACPU Length = 297 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 66/268 (24%), Positives = 127/268 (47%), Gaps = 24/268 (8%) Query: 25 FHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFY 84 +H I + LH HD ++F +L G IN + + L+ GD VFI G H + Sbjct: 28 YHTKICDHRSGHIPLHWHDEFQFVFILEGEAEFHINEETICLKEGDGVFINCGCLHMAKD 87 Query: 85 EFGATRI-LNVGISKRFFEQHYL------PLL-----PYCFVASQVYRTNNAFLTYVETV 132 G T L + +S F + L P + PY + + + N+ + ++T+ Sbjct: 88 ANGTTCTYLCLNVSPHFITANELFTTFVHPYMHASQTPYILLNRKDHWPNHIYQC-IQTI 146 Query: 133 ISSLNLRETG----LEEFVEMVTFY--VINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQ 186 ++ ET LE ++++T + ++ + + D + +K + +H + Sbjct: 147 QRLID--ETPAYYELELNIQLITMWKCLLQNGFQIKYDARQHDKNERMKPMLNWIH--QH 202 Query: 187 FSESALENMVALSAK-SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIA 245 + E L +A + + S+ R + KTP+ +NE R+ + L+ T++++T+IA Sbjct: 203 YHEKVLLQDIARAGQLSRSECCRYFKDILKKTPLHYVNEYRVQQSLILLQETDFNITEIA 262 Query: 246 FEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 ++ G++S S FI FK++ + TP +YRK Sbjct: 263 YKVGFNSTSYFISMFKRIKNTTPLAYRK 290 >UniRef50_C0EGR3 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGR3_9CLOT Length = 345 Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 67/264 (25%), Positives = 114/264 (43%), Gaps = 35/264 (13%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKR 99 H HDY+E V +G F G+ + L +GD + + HQ + I N+ +SK Sbjct: 86 HNHDYFEIIYVHSGSCFNRFQGETIKLCKGDILLLNPTILHQIYALHEEDHIFNIMLSKS 145 Query: 100 FFEQHYLPLLP-----YCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYV 154 FE LL F + Y+ N YV S +L E E ++ Y+ Sbjct: 146 LFEGSMWQLLSGNKIINNFFVNYFYQMNKT-KDYVHFRCSQNHLIE---ETITSLIAEYL 201 Query: 155 INRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSE-------SALENMVALSAK------ 201 + +Y QVI L + + +++ ++ F E L ++++ A+ Sbjct: 202 GKKPAYY---QVIQSYLIILFAYLSRIYSEQHFIEQQDLEKIGILPDIISFIAQNYQSVT 258 Query: 202 ----------SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 S Y +R + + GKT +I+++ ++N AK+ L TN ++TDIA + G++ Sbjct: 259 LTEIQNVFNYSSGYTSRLIKHHTGKTFSEIVHDFKLNHAKELLVSTNLNITDIAEKIGFN 318 Query: 252 SPSLFIKTFKKLTSFTPKSYRKKL 275 K FKK TP YR+ + Sbjct: 319 DSHYLNKVFKKRFGITPTQYRRGM 342 >UniRef50_B0MEI4 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MEI4_9FIRM Length = 299 Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 61/252 (24%), Positives = 102/252 (40%), Gaps = 16/252 (6%) Query: 37 SGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFI-PLGSHHQSFYEFGATRILNVG 95 + +H H +YEF +V G +N + +GD VFI P +H FY RI+N+G Sbjct: 31 ASIHTHTFYEFFIVAEGSALHLVNDSIQTITQGDLVFIRPKDTHSYQFYYSDDFRIINIG 90 Query: 96 ISK------RFFEQHYLPL-------LPYCFVASQVYRTN-NAFLTYVETVISSLNLRET 141 S+ R F H L LP C + R + + ++ + +++T Sbjct: 91 FSEQLLQNIRLFLDHTAMLRTLTESELPPCVRLDKSGREEISVRFEEIGALMDTPKIQKT 150 Query: 142 GLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAK 201 + + + EE P W + + +M + M+ LS+ Sbjct: 151 VFYAKCCLADVFTRYFFSYDTEEFPTASCPSWFQPMLNEMQKFDNL-RIGFPKMIELSSC 209 Query: 202 SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFK 261 S +L R + TP + IN R+ ++ L T+ + +I+ G+SS S F FK Sbjct: 210 SSNHLCRVFKSVMSVTPTEYINSKRLEYSVYLLTQTSKEIIEISMLCGFSSLSHFYHLFK 269 Query: 262 KLTSFTPKSYRK 273 K P +RK Sbjct: 270 KKYQCPPSRFRK 281 >UniRef50_C7IFZ3 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IFZ3_9CLOT Length = 296 Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 67/264 (25%), Positives = 112/264 (42%), Gaps = 41/264 (15%) Query: 41 QHDYYEFTLVLTGRYFQEINGKRVLLERGD-FVF-IPLGSHHQSFYEFGATRILNVGISK 98 HD++E +VL G +N + +++GD FVF + L ++ + F +I+N+ Sbjct: 33 HHDFFELVIVLNGTATHIVNSEEFFIKKGDVFVFNMDLSHGYKDPHNF---KIINIMYKP 89 Query: 99 RFFEQ-----HYLPLLPYCFVASQVYRTNNAFLTYVETVISSLN-LRETGLE-------- 144 ++ P FV +R +F + ISSL + E G Sbjct: 90 ERLDEICNDIKKSPGYQALFVLEPFFRKKYSFSNTLSLSISSLEYVAELGARINEEYKRK 149 Query: 145 ----------EFVEMVTF----YVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSES 190 F+EMV + Y+I E +++ D L + + D + Sbjct: 150 DQGYQTMIYARFMEMVVYLSRQYII-------ENKLLHDTFVHLAKAILFLEDN-YLNPI 201 Query: 191 ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGY 250 LE + + S + R + YG TP I +R+N A L+ +N + DIA E+G+ Sbjct: 202 KLEKLADEAHMSVRHFNRIFKENYGTTPFNCILHLRVNHACSLLKNSNLCIADIALESGF 261 Query: 251 SSPSLFIKTFKKLTSFTPKSYRKK 274 S + F + FKK+T TPK YR + Sbjct: 262 SDSNYFSRQFKKITGITPKEYRAR 285 >UniRef50_Q8EL34 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8EL34_OCEIH Length = 268 Score = 70.5 bits (171), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 59/255 (23%), Positives = 110/255 (43%), Gaps = 21/255 (8%) Query: 30 YNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGAT 89 +N+ E + H+HD Y+ L G +N + + + +F+ IP + H A+ Sbjct: 17 HNEKEKVKS-HEHDTYQLLYTLKGTGICTLNHQEYAIAQDNFIIIPPETEHS----IAAS 71 Query: 90 RILNVGI----SKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSL--------N 137 + V + + F + L+P F +++V + + + + ++ + N Sbjct: 72 SKMTVLVLEFEADIFHSDVKMELIPEVFRSARVQKLSTFDSSEIRQLLRKMLYEQSYGDN 131 Query: 138 LRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVA 197 L ETG++ ++ + F++I R H E D+ ++ D F E++ Sbjct: 132 LWETGIKIYMAEL-FFIIARSFH---EPSQTDINTLRVEQLKHYIDTRYFDIKNAEDIAD 187 Query: 198 LSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFI 257 S+ Y+ + YY TPMQ + E+R+ K+ L T+ + I FE G+ S S F Sbjct: 188 RMDMSKRYIQSIFKEYYNSTPMQYLTEVRLGLVKQMLVDTDKDIVSICFEVGFESLSTFY 247 Query: 258 KTFKKLTSFTPKSYR 272 + FK P YR Sbjct: 248 RLFKNNVGVPPNMYR 262 >UniRef50_B7I0Q9 Transcriptional regulator, AraC family protein n=11 Tax=Bacillales RepID=B7I0Q9_BACC7 Length = 287 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 84/173 (48%), Gaps = 15/173 (8%) Query: 116 SQVYRTNNAFLTYVET---VISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQ 172 + Y NN +ET ++ SL + G EE + Y++N H+ + ++ + Sbjct: 111 DKTYHKNNTLSFQLETFKHILPSLEINSVGYEEQFHKLMQYILNE--HFNTYKEVESLSA 168 Query: 173 WLKSTVEKMHDKEQFSES----------ALENMVALSAKSQEYLTRATQRYYGKTPMQII 222 ST E+++ + + L ++ +S S +L R + YGKTP Q I Sbjct: 169 IRTSTREELYRRICIAHDYIRAYYDKTIKLNDIARISCLSPNHLLRTYTQIYGKTPHQHI 228 Query: 223 NEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 +E R+ AK+ L + ++TDI F+ G+ +P F K FK+ +PK YRKK+ Sbjct: 229 SEFRVTKAKQLLSELSNNMTDITFKLGFQNPVSFSKMFKQHVGISPKEYRKKV 281 >UniRef50_C7PAR8 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PAR8_CHIPD Length = 279 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 59/256 (23%), Positives = 109/256 (42%), Gaps = 23/256 (8%) Query: 33 TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFI-PLGSHHQSFYEFGATRI 91 T+ IS LH HDY E + G ING L GD + + P H S G T + Sbjct: 28 TDDIS-LHNHDYAEIFWIEHGNGTHLINGLNTPLNTGDIIMMRPDDLHTFSSNRQGIT-M 85 Query: 92 LNVGI---SKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEE--- 145 +N+ + ++F++ Y P S+ + L Y T+ ++ T L E Sbjct: 86 MNLAFPFKTVQYFKKRYFP-------ESEDFFWKKGDLPYQATLDETILRSITHLAEKMW 138 Query: 146 -------FVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVAL 198 +++ + L + D+P WL + ++ + ++ Sbjct: 139 KHQDSAIYLDSFLLSLFKLLLPTENQPDNQDIPAWLNNAIQLFPAQPDLFRLGARGFASI 198 Query: 199 SAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIK 258 ++ +Y+ R ++ Y KT ++ E+R+ FA +QL +TN + I + G+++ F K Sbjct: 199 CGRNIDYVNRTVRKCYDKTLSTLVTELRMQFAARQLAITNAPIKSICHDCGFNNLGHFYK 258 Query: 259 TFKKLTSFTPKSYRKK 274 F+ + TP YR++ Sbjct: 259 QFQTIYQQTPSQYREQ 274 >UniRef50_C6IIU9 Transcriptional regulator n=2 Tax=Bacteroides RepID=C6IIU9_9BACE Length = 278 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 55/259 (21%), Positives = 111/259 (42%), Gaps = 14/259 (5%) Query: 25 FHVFIYNKTESIS-GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSF 83 FH+ N T S LH HDY E V G +NG + L GD + + H Sbjct: 18 FHIARVNITSSQDLSLHSHDYAEILWVEKGTGIHHVNGHQFRLSPGDLIMVRPKDRHTFS 77 Query: 84 YEFGATRILNVGI---SKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRE 140 I+NV + +F Q Y F + ++ + ++ L+ R Sbjct: 78 SSGKGIVIVNVAFPVETLDYFRQRYFEWSNLYFWTTGMFPFQ---MRLSRDIVKRLSSRA 134 Query: 141 TGLEEF------VEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALEN 194 ++ ++ + ++ ++ + + ++P WL + ++K + E F + + Sbjct: 135 EEAMKYGRSNIQLDSLLLFIFRQITANEKVEDSSEIPVWLFNAIQKFNSPEFFIQ-GIAG 193 Query: 195 MVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPS 254 V L ++ +Y+ R + ++ K+ +INE ++ +A QL +T+ + +I G+ + Sbjct: 194 FVTLCDRNIDYVNRIVKLHFHKSLTDLINEFKMQYATTQLSITSMPIKEICTNCGFRNLG 253 Query: 255 LFIKTFKKLTSFTPKSYRK 273 F K F+ + + TP YR+ Sbjct: 254 HFYKIFRSVYNQTPYEYRR 272 >UniRef50_Q5WCU1 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WCU1_BACSK Length = 308 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 73/295 (24%), Positives = 128/295 (43%), Gaps = 35/295 (11%) Query: 14 AREQQLFNGKNF------HVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLE 67 A ++QL +G + H+ I+ H HD E +GR ++G+ L+E Sbjct: 7 AYKEQLPSGNDIREPIHCHMQTSEPNRRIASPHFHDAIELLYSFSGRARVFVSGQPFLME 66 Query: 68 RGDFVFIPLGSHHQSFYEFG-ATRILNVGI--------SKRFFEQHYLPLLPYCFVASQ- 117 +GD V I H + E G L + + S+ FE Y+ P+ S Sbjct: 67 KGDLVIINSNEVHAIWGESGEKVEYLVIKLDPEVLYSTSRSIFESKYV--FPFTMSKSSP 124 Query: 118 --VYRTNNAFLTYVETVISSLN----LRETGLEEFVEM-VTFYVINRLRHYREEQVIDDV 170 + ++ T + I+ +N ++ G + + + + + LRH+R+ + Sbjct: 125 QTLLKSGEMASTVIPATIAKINDEFSHKDYGYDFAIRIHICTIFLAVLRHWRQSGISVGT 184 Query: 171 PQWLKSTVEKMHDKEQFSESALENMVALSAK--------SQEYLTRATQRYYGKTPMQII 222 S + M Q ES AL+AK S Y +R + G++ +++ Sbjct: 185 ESINDSDFQLMRQVFQLLES--HYATALTAKQAAATCNLSYSYFSRKIKSITGRSFTELL 242 Query: 223 NEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 N IRI A+K L T+ S+T++A GYSS S FI+ FK+ +P ++K+L + Sbjct: 243 NYIRITEAEKLLTTTDLSITEVAVSVGYSSTSYFIQHFKQAKHLSPLRFKKRLQQ 297 >UniRef50_C6W763 Transcriptional regulator, AraC family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W763_DYAFD Length = 292 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 69/262 (26%), Positives = 116/262 (44%), Gaps = 40/262 (15%) Query: 37 SGLHQHDYYE---FTLVLTGRYFQEINGKRVLLERGD-FVFIPLGSHHQSFYEFGATRIL 92 +G+H+HD+YE FT V G+ I+ + + R D F+ +P H E R Sbjct: 44 NGVHRHDFYEVLWFTDVEPGQA-HYIDFNQYPIARNDLFLLLPDQVHSMDQRE---KRGF 99 Query: 93 NVGISKRFFEQHYLPLLPYCFVASQVYR------------------TNNAFLTYVETVIS 134 + ISK FFE+ F+ S +++ NA +T + T Sbjct: 100 VMAISKDFFER---------FIGSDIFKLFRYSANFTVTIPDSRLPVMNALMTLIRTEYE 150 Query: 135 SLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALEN 194 R LE ++ + + + + D Q L ++E ++ + Q N Sbjct: 151 D-GKRPAILESYLRSWFLHCFDLQKEAGDAAPRDARLQMLLESIE-LNYRRQRKADFYAN 208 Query: 195 MVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPS 254 ++LSAK LTR + +GKT QIIN+ + AK+++ + +I++E G+S PS Sbjct: 209 ELSLSAKRLNELTRGS---FGKTISQIINDRLVLEAKREIGYLRKPIKEISYELGFSEPS 265 Query: 255 LFIKTFKKLTSFTPKSYRKKLT 276 F + F K T P+ +RKK+ Sbjct: 266 YFTRFFGKQTGLAPEDFRKKIA 287 >UniRef50_C0EDI6 Putative uncharacterized protein n=2 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDI6_9CLOT Length = 371 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 58/275 (21%), Positives = 120/275 (43%), Gaps = 32/275 (11%) Query: 24 NFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSF 83 N H+ +N++ H+HD++E V+ G ++G+R+LLE+GDF + + HQ Sbjct: 91 NAHIPFFNRSPQP---HKHDFFELVYVVRGSMKNVVDGRRILLEQGDFCLMNPNAVHQVE 147 Query: 84 YEFGATRILNVGISKRFFEQHYLPL-----LPYCFVASQVYRTNNAFLTYVETVISSLNL 138 + +N + K F + +L + L F +Y N Y+ V S+ +L Sbjct: 148 TDGKDPLAINFLMKKELFNKAFLSIVLENELFANFFVDSIYHKKNK-QNYL--VFSARHL 204 Query: 139 RETGLEEFV-------------------EMVTFYVINRLRHYREEQVIDDVPQWLKSTVE 179 E + +++ ++ + R Y+ E + + + Sbjct: 205 EEPIISQYLLQIFREYENDQLYSQRVIESAMSCLFVEFTRSYKRELEFESLQDLPGGNIS 264 Query: 180 KM--HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMT 237 K+ + E + + L+ +YL ++Y G++ +I+ + R+ A + L+ T Sbjct: 265 KIISYLSENYRTATLQTTAKQFNYHPKYLPNLLKKYLGQSFSEIVQQFRLAHACELLKQT 324 Query: 238 NYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 ++D+A E+GY++ + F K F++ +P YR Sbjct: 325 ELPISDVAQESGYTNRTYFYKVFQQKFGMSPNDYR 359 >UniRef50_A5ZUG1 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZUG1_9FIRM Length = 277 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 23/207 (11%) Query: 74 IPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVI 133 I L + S+Y G GIS F +Q + Y ++ + L Y ++ Sbjct: 80 ISLSASPLSYYTVGVD-----GISFSFHDQKEFQIFHY-------HQKHADLLFYFHSLF 127 Query: 134 SSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDV-------PQWLKSTVEKMHDKEQ 186 L+ + G EE + +I++LR + + D P + V++ D Sbjct: 128 QELDEKNDGYEEICKHTLAILISQLRRF----AVSDFQLFPSFHPSKECALVKRYLDSHY 183 Query: 187 FSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAF 246 + LE + +LS ++ YL+ RYYG +P+ + RI K LE T++ ++DIA Sbjct: 184 SDDINLEQLASLSHLNKYYLSHEFTRYYGISPISYLTHRRIEVCKNLLENTDHEISDIAH 243 Query: 247 EAGYSSPSLFIKTFKKLTSFTPKSYRK 273 AG+SS S ++F+K T YR+ Sbjct: 244 LAGFSSQSYLAQSFRKYCGMTAGEYRR 270 >UniRef50_A4EK09 Transcriptional regulator, AraC family protein n=1 Tax=Roseobacter sp. CCS2 RepID=A4EK09_9RHOB Length = 288 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 60/248 (24%), Positives = 103/248 (41%), Gaps = 18/248 (7%) Query: 37 SGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFI-PLGSHHQSFYEFGATRILNVG 95 + H HD++E L+ +G+ +NG+ LE G FI P H S +I+NV Sbjct: 31 NAAHDHDFFEVFLIESGQTSHWVNGETQQLEPGHLTFIRPNDVHAFSADRTKGCQIINVM 90 Query: 96 I---SKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVE-----TVISSLNLRETGL---E 144 + + Y + F S+ L V V L L E Sbjct: 91 FRVETAKHLTNRYAKTIESAFFDSRAALPEMHMLDPVRFARAINVAQQLQTAHRSLARIE 150 Query: 145 EFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQE 204 EF+ ++T V + + + P+W + FS+ A +A + +S E Sbjct: 151 EFLLVLTNRVADAA-----GGIAQNAPRWFAEACSAAQSQTVFSKGAAG-FIAAAGRSHE 204 Query: 205 YLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLT 264 ++ R + G TP + IN++RI +A L S+ D+ + G+ + S F + F++ Sbjct: 205 HVCRTCKAVTGLTPSEYINQVRIEYAAHLLRSDERSIDDVVNDCGFDNSSYFYRLFRRQY 264 Query: 265 SFTPKSYR 272 TP++YR Sbjct: 265 GTTPRAYR 272 >UniRef50_A0AET6 Complete genome n=16 Tax=Listeria RepID=A0AET6_LISW6 Length = 277 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 61/258 (23%), Positives = 118/258 (45%), Gaps = 28/258 (10%) Query: 36 ISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRI-LNV 94 I H HD+ E +++ G+ +I G+RV LE+GD + G H E G T L++ Sbjct: 26 IGDNHHHDFLEISIIYDGKVIYDIEGERVELEKGDMLIFNPGVKHYDITEPGMTNAQLHI 85 Query: 95 GISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETG----LEEFVEMV 150 G E + P+ + ++A L+ + +I + + G L+ FV + Sbjct: 86 GFRNFTLEGYSRNTFPFKKAFLRKKEEDSAILSISKQIIEEKDAEKPGYDLILKAFVMQL 145 Query: 151 TFYVI----------NRLRHYREEQ----VIDDVPQWLKSTVEKMHDKEQFSESALENMV 196 +V+ N ++ +EQ +++++ +++ H E S S L + Sbjct: 146 IIHVLREATPEQLENNGVKLSTDEQQKQLLVNEIIHYMEK-----HHTEDVSLSTLSQTM 200 Query: 197 ALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLF 256 +S Y+++ + G++P+ + +IR++ A++ L+ N +V A GY+ F Sbjct: 201 YISPA---YISKVFKEETGESPINYLIKIRLSRAEELLKNKNITVKQAANMVGYNDAYYF 257 Query: 257 IKTFKKLTSFTP-KSYRK 273 K FKK F P +++RK Sbjct: 258 SKLFKKYYGFPPSENWRK 275 >UniRef50_C0ECN2 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0ECN2_9CLOT Length = 334 Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 60/264 (22%), Positives = 113/264 (42%), Gaps = 28/264 (10%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISK 98 +H+HDY+E V G + V +++GD + + H + E + N+ IS Sbjct: 74 MHRHDYFEMIYVYRGGFVNVFPDHTVRMKQGDIMLLNPNILHAPYVERDDDIVFNIFISN 133 Query: 99 RFFEQHYLPL-----------LPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFV 147 + +PL + Y + SQ + +L + + S+ L E +EE++ Sbjct: 134 PMIREKIIPLQKDNSLLISFFMEYLYFDSQ----DKKYLNFTDNSPDSILLTEKMIEEYI 189 Query: 148 EMVTFY----------VINRL-RHYREEQVIDDVPQWLKSTVEKM--HDKEQFSESALEN 194 E FY + ++L R Y + ID +P+ + + + + L++ Sbjct: 190 EQRPFYQNMTDAYLVLLFSQLSRDYYKNHSIDVLPKNHHTLSYDIINYIGQNCRSITLDS 249 Query: 195 MVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPS 254 + + YL+R ++ GKT QI+++ ++ A + T+ + DI G+ S Sbjct: 250 LAKHFQYTPNYLSRLIRQSTGKTFSQIVSQQKLQRAAGFITSTDMPIVDIGQIVGFYDVS 309 Query: 255 LFIKTFKKLTSFTPKSYRKKLTEF 278 FI++FKK TP YRK + Sbjct: 310 HFIRSFKKEYHLTPAEYRKTFSSL 333 >UniRef50_C6W159 Transcriptional regulator, AraC family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W159_DYAFD Length = 264 Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 53/235 (22%), Positives = 103/235 (43%), Gaps = 10/235 (4%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISK 98 LH H+ T +L G ++ + G VF G HQ+ +R N+ + Sbjct: 39 LHAHENAHVTTLLAGATLEKRQRSECYRQAGQAVFFHAGEPHQNSNTLPGSRNFNIEFTT 98 Query: 99 RFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRL 158 FF+ ++L +A V A L +V SL+ + + V M +++ Sbjct: 99 DFFQTYHLD---PSDIAGAVSNNPLAALVFVNAYRESLH-NDPMANDSVAMAILSLLDT- 153 Query: 159 RHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTP 218 + P+W+ E +HD+ + LE + + +++ +RY+ + Sbjct: 154 ----RTNAGNRPPKWVGQVTELLHDRWN-EQVGLEELSKETGVHSVTISKHFRRYFACSL 208 Query: 219 MQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 + + ++++ A ++ T+ +T IA+EAG++ S F + FK++T F PK YR Sbjct: 209 SEYMRKLKVLNALSLIKNTSNQLTHIAYEAGFADQSHFTRVFKEVTGFLPKQYRN 263 >UniRef50_C6D8V3 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8V3_PAESJ Length = 309 Score = 67.0 bits (162), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 63/263 (23%), Positives = 118/263 (44%), Gaps = 34/263 (12%) Query: 38 GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGA-TRILNV-- 94 G HQHD+ EF V++G E N + + +GD + + G H+ E G+ R+LNV Sbjct: 35 GFHQHDWTEFMYVISGNCTVETNKDVIAMRKGDLIMLDAGVPHRLIVESGSPCRMLNVEF 94 Query: 95 ------GISKRFFE-QHYLPLLPYCF---VASQVYRTNNAFLTYVETVISSLNLRETGLE 144 GI + ++ P+ + + V R + ++ L+L G E Sbjct: 95 GFQPCDGIYPSMNQLANHNPMFSKLLEQRLDTIVLRDYEDIQVNLRNLVFELDLGGEGKE 154 Query: 145 EFVEMVTFYVINRL------------RHYREEQVIDDVPQWLKSTVEKMHDKEQFSESAL 192 + EM+T ++++L ++ E Q + +++ E +H Q+ ++A+ Sbjct: 155 QGREMMTNLLMSQLLVRVGRLVAVEAKNSTERQ----IHHYVRQATEYIH---QYYDTAI 207 Query: 193 E--NMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGY 250 + ++ A YL R + KT + + ++R++ AK L T+ + ++A G Sbjct: 208 QAKDIAAAVNLHPVYLQRIFKSNMNKTINEYLVDLRMDKAKMLLARTDVPIIEVADHIGL 267 Query: 251 SSPSLFIKTFKKLTSFTPKSYRK 273 +S F FKK+T +P YRK Sbjct: 268 NSRQYFSMLFKKMTGISPAEYRK 290 >UniRef50_C0EGI4 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGI4_9CLOT Length = 333 Score = 66.6 bits (161), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 65/259 (25%), Positives = 109/259 (42%), Gaps = 21/259 (8%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKR 99 H H+Y+E V G V L +GD + + H + E + N+ +SK Sbjct: 73 HNHNYFELAYVYRGECVHATKENTVRLHQGDAILMNPHVLHWMYTEHPQDVVFNIMLSKE 132 Query: 100 FFEQHYLPL-----LPYCFVASQVYRTN--NAFLTYVETVISSLN-LRETGLEEFVE--- 148 F+ P L + F Y+ N + LT+ + + L + +EEF+E Sbjct: 133 IFQSDVFPCMTDNRLLFHFFLDYFYQLNKLDDSLTFPHSPKHPIEPLIKLMVEEFIEDDL 192 Query: 149 ----MVTFYVINRL----RHYREEQVIDDVPQWLKSTVEKM--HDKEQFSESALENMVAL 198 ++ + I R YRE D L TV + H ++ + +LE++ Sbjct: 193 CYDSVIKAHCIQLFAYLARVYRERYASTDADVELNQTVIHLIYHMQQHLRQLSLESLAEA 252 Query: 199 SAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIK 258 S +++R + GK+ +++N +RI AK LE T+ + +IA G + S K Sbjct: 253 FHYSPSHVSRLFRTRLGKSYTEVLNSLRIQTAKSLLETTSLPMGEIADSIGVNDTSYLNK 312 Query: 259 TFKKLTSFTPKSYRKKLTE 277 FKK TP YRK+ + Sbjct: 313 IFKKKYGLTPLQYRKQFQQ 331 >UniRef50_C5RE92 Transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=C5RE92_CLOCL Length = 286 Score = 66.6 bits (161), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 61/252 (24%), Positives = 109/252 (43%), Gaps = 24/252 (9%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKR 99 H H YE +++G + +NG + L+ GD FI G H G T I V Sbjct: 36 HWHTEYEIIRIISGEFLLTLNGNELKLKTGDLAFIHAGILH------GGTPIDCVYECIV 89 Query: 100 FFEQHYLPLLPYCF-----------VASQVYRTNNAFL-TYVETVISSLNLRETGLEEFV 147 F + L + C V + + T+N L T + S+ ++ G E Sbjct: 90 FDMKSLLKVNSTCSKQIQDIIHNSKVINSLLPTDNLELQTVCNYLFESMAQKKLGYELVT 149 Query: 148 EMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHD-----KEQFSES-ALENMVALSAK 201 + ++++ + +R + + + + + ++Q+ + LE++ + Sbjct: 150 QGSLYHLLGIILEHRLYSTPKEATSKNQQRINQFKNVLSLIEQQYPDPLTLEDLSKAAGM 209 Query: 202 SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFK 261 + +Y R + ++P+ +N RI + +QL TN S+T+IA G++ S FIKTFK Sbjct: 210 TPKYFCRFFRGMTQRSPIDYLNYYRIESSCEQLVSTNESITEIALNCGFNDISYFIKTFK 269 Query: 262 KLTSFTPKSYRK 273 K TPK Y K Sbjct: 270 KYKGVTPKQYLK 281 >UniRef50_B2TRB4 Transcriptional regulator, AraC family n=5 Tax=Clostridium RepID=B2TRB4_CLOBB Length = 305 Score = 66.6 bits (161), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 44/118 (37%), Positives = 60/118 (50%), Gaps = 9/118 (7%) Query: 156 NRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYG 215 N+ + YR E + + + EK+H K+ S NM +++Y R +R G Sbjct: 190 NKNKDYRVEYIKTAISYIQNNYSEKIHIKDL---SKQINM------NEQYFCRFFKRMIG 240 Query: 216 KTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 KTPM+ +NE RI AK+ L TN V DI E G+ + FIK FKK T P YRK Sbjct: 241 KTPMEYVNEYRIKKAKELLRETNRQVMDICLECGFHNMGNFIKVFKKHTGINPMKYRK 298 >UniRef50_C0Z7V8 Probable transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z7V8_BREBN Length = 285 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 65/257 (25%), Positives = 116/257 (45%), Gaps = 22/257 (8%) Query: 39 LHQHD-YYEFTLVLTGRYFQEINGK-RVLLERGDFVFIPLGSHHQSFYEFGATRILNVGI 96 LHQHD +++ +++L G + + R L R V P G H+ F E A R+L I Sbjct: 31 LHQHDSFFQISMLLQGNPLVQCEQQFRKLAGRQRLVASP-GCQHRHFSEAEAMRLLLFFI 89 Query: 97 SKRFFEQHYLPLL-----PYCFVASQVYRTNNAFLTYVETVISSL---NLRETGLEEF-V 147 S E Y + P FV T+ F ETV + + + + LE+ Sbjct: 90 SPSLLESVYADKMEAVSGPIEFVPWSEDETDG-FQRIAETVCTQMITQQVEKLALEQLEW 148 Query: 148 EMVTFYVI----NRLRHYREEQVI--DDVPQWLKSTVEKMHD---KEQFSESALENMVAL 198 E+ T + + + +R + + +P + ++++ D + + +L+ + + Sbjct: 149 ELATLLLTVQEGSHTQKWRGKHLAPYSAIPASIHPVLKRVTDFIQDDVTVDCSLDTLAGV 208 Query: 199 SAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIK 258 + S+ +L R + G+TP Q + + R+ A L + +VT IAFE G+ S S F + Sbjct: 209 AGISKFHLIRLFREQIGRTPAQYVTDQRVTRAAWLLRNSKLAVTVIAFEVGFGSVSTFER 268 Query: 259 TFKKLTSFTPKSYRKKL 275 F+K S +P YR + Sbjct: 269 AFRKKYSVSPLDYRNSM 285 >UniRef50_C0EDW5 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDW5_9CLOT Length = 326 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 61/254 (24%), Positives = 112/254 (44%), Gaps = 19/254 (7%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISK 98 LH H Y+E V G+ + + L GD + + H+ + E + N+ ISK Sbjct: 68 LHTHTYFEMIYVYHGKAYNNFADSSMTLHTGDILILNPNIPHRLYIESPEDIVFNIMISK 127 Query: 99 RFFEQHYLPLLP-----YCFVASQVYRTNNA-------------FLTYVETVISSLNLRE 140 FE+ +L L+ F S +Y N A ++ +I + Sbjct: 128 DLFEKSFLLLISENDLFSNFFISYLYHMNQASDSILFRHNPESGITAVLDMMIEEFFNKP 187 Query: 141 TGLEEFVEMVTFYVINRL-RHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALS 199 G E+ +E RL R Y ++ ++++ + K + +E F+E+ L + Sbjct: 188 MGYEKALESFLALTFTRLTRSYSHQENLEELKKQQKIMPIIAYIRENFAEATLVSTAQQF 247 Query: 200 AKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKT 259 S++YL+R ++ GK+ +I ++ +A++ L + +++IA GY++ S F K Sbjct: 248 NYSEKYLSRLIKQRTGKSFNEISIGYKLEYARELLLNSVLPISEIAQRVGYANVSYFFKA 307 Query: 260 FKKLTSFTPKSYRK 273 FKK TP +RK Sbjct: 308 FKKRYMQTPYQFRK 321 >UniRef50_A8FAK6 AraC family transcriptional regulator n=2 Tax=Bacillus pumilus RepID=A8FAK6_BACP2 Length = 352 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 65/263 (24%), Positives = 111/263 (42%), Gaps = 45/263 (17%) Query: 42 HDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFF 101 HD++E VL + E+ K++ L+ GD FIP + H+ T + + I K F Sbjct: 98 HDFFEMIYVLENEMYVEVEDKKMALKSGDIAFIPPNTLHKPIV-MENTIAIQIMIRKSTF 156 Query: 102 EQHYLPLLPYCFVASQVY------RTNNAFLTYVETVISSLNLRETGLEEFVE------- 148 ++ + +L V S+ + + N L + + NL + L+ F E Sbjct: 157 QKVFFKMLKGNHVISEFFLNALYIKENKNILIFHSHL--DKNLVDCSLQLFTENYNRFPG 214 Query: 149 ----MVTFYVI---------------NRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSE 189 M + I N+++ YR+ ++I + Q+++ E + +E E Sbjct: 215 YQLIMNNLFEILLCLLLRFKPSHMNVNQVKQYRDIRMI-QMLQYIQQCCEHITIQEMAEE 273 Query: 190 SALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAG 249 L S YL++ R GK+ +I EIR+ A + + +N + DIA G Sbjct: 274 FNL---------SPSYLSKYIARKLGKSFREIRQEIRLEKACEMITSSNLQINDIATAVG 324 Query: 250 YSSPSLFIKTFKKLTSFTPKSYR 272 Y + FI+ FKK TP YR Sbjct: 325 YQNVEHFIRLFKKKYHLTPHQYR 347 >UniRef50_C0EIL7 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIL7_9CLOT Length = 332 Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 64/261 (24%), Positives = 114/261 (43%), Gaps = 28/261 (10%) Query: 39 LHQHDYYEFTLVLTGRYFQEI-NGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGIS 97 +H H Y+E V G N +R++L +GD + + + H + I N+ + Sbjct: 71 MHNHGYFELVYVYHGSCVNLFPNQERIVLNQGDILLLNPNALHCPYTTLEDDYIFNIVLK 130 Query: 98 KRFFEQHYLPLLP-----YCFVASQVYRTNNA-------------FLTYVETVISSLNLR 139 + FE+ L LL F + +YR N A +E +I+ L + Sbjct: 131 PKLFEKSMLSLLSDNPLFSNFFVNYMYRVNKARDYMLFHTNGEKRIAQTMENIITELYSK 190 Query: 140 ETGLEEFVE---MVTFYVINRLRHYREE---QVIDDVPQWLKSTVEKMHDKEQFSESALE 193 E E +V F + R+ Y+E+ + D+V + + D E FS++ L+ Sbjct: 191 EMCYRRAAEAELIVLFTCLARI--YKEQLGLKGFDEVKNKQVTDIITYMD-ENFSQATLQ 247 Query: 194 NMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSP 253 ++ S YL+R +++ K +II+ ++ A LE T+ + +IA G++ Sbjct: 248 SVADHFGYSTHYLSRMIKKHTNKNFSEIIHSFKLENACTYLETTDIPMREIAELVGFNDA 307 Query: 254 SLFIKTFKKLTSFTPKSYRKK 274 S F K FK+ +P YRK+ Sbjct: 308 SYFHKVFKQKYGQSPAEYRKQ 328 >UniRef50_B6FJS0 Putative uncharacterized protein n=2 Tax=Clostridium RepID=B6FJS0_9CLOT Length = 313 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 73/280 (26%), Positives = 116/280 (41%), Gaps = 41/280 (14%) Query: 21 NGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH 80 NG+ FH +H HD +FT V G ++ G+ +L+ G+ +FI G H Sbjct: 49 NGRGFH-----------DVHWHDEIQFTYVSKGELTMQVEGREYVLKEGEALFINSGLIH 97 Query: 81 --QSFYEFG-------ATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVET 131 S E G ++L R + + LP L ++ V +A E Sbjct: 98 VTTSISEDGQYEGFMFPEKLLGFFPGSRMEQNYVLPYLKSNVLSVCVLYRESA---EDEK 154 Query: 132 VISSL-NLRE--------TGLE-EFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM 181 ++S + NLRE T E E +T + +R+ + + +P E+M Sbjct: 155 ILSDIRNLRELFNNKENVTAFEYEVAVRMTAIWLQIVRNVSD--TMQKMPACYLQRQERM 212 Query: 182 HDK-----EQFSESALENMVALSAK-SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLE 235 E + E+ +A SA S E R + +TPM ++ R+ + L Sbjct: 213 KKMMQYIVEHYHEAITLKEIAESASISIEECRRCFKDIIKETPMHYLSSYRVMVGMELLR 272 Query: 236 MTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 T+ +TDIAF G++ S FI+ FKK TPK YR + Sbjct: 273 TTDLDITDIAFRVGFNDSSYFIQAFKKKNGMTPKQYRNHI 312 >UniRef50_C1I2I2 Transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I2I2_9CLOT Length = 295 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 72/262 (27%), Positives = 117/262 (44%), Gaps = 35/262 (13%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGA--TRILNVGI- 96 H HD EF +L G I+ K + GDF+ IP GS H Y G ++I V + Sbjct: 38 HWHDEMEFIYILNGSAEICIDFKIFSVTTGDFIIIPNGSIH---YMIGKENSKISYVALV 94 Query: 97 -SKRFFEQHYL---------PLLPYCFVASQVYRTNNA----FLTYVETVISSLNLRETG 142 + E + L P++ + RT+N + +I S N + G Sbjct: 95 FNLSLIEGNTLDYSQINFVNPIMKNKLFFKNIIRTSNVGHAKIVNSFNNIIESYNNKSYG 154 Query: 143 LEEFVEMVTFYVINRLRHYREEQVI-----DDVPQWLKSTVEKMHDKEQFSESALENMVA 197 + ++ F + + + ++E + ++ +K VE + + ++ ++ +N ++ Sbjct: 155 FQLEIKGSLFSIFSTI--FKEGYISLNLNSENYSDLIK--VENLKEVIKYIQTNYKNPIS 210 Query: 198 LS-----AKSQEY-LTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 + A+ EY R + GKT Q IN RI A L TN S+T+IA+E G+ Sbjct: 211 IKELADIAQYSEYHFLRFFKAQTGKTCTQYINYFRIQKATLLLFDTNLSITEIAYEVGFG 270 Query: 252 SPSLFIKTFKKLTSFTPKSYRK 273 S FIKTFKK S +P YRK Sbjct: 271 DVSYFIKTFKKFLSISPTKYRK 292 >UniRef50_D2MNX8 Transcriptional regulator, AraC family n=1 Tax=Bulleidia extructa W1219 RepID=D2MNX8_9FIRM Length = 282 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 72/277 (25%), Positives = 124/277 (44%), Gaps = 48/277 (17%) Query: 31 NKTESISGL-HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGAT 89 N+ E I L H H +EF +L G Y ++GK L GD I H Sbjct: 15 NEIEEIDELAHWHHSFEFIEILEGEYQCHVSGKTFLAHPGDLCIINRSRIH--------- 65 Query: 90 RILNVGISKRFFEQHYLPLLPYCFVAS-QVYRTNNAFLTYVETVISSLNLR-ETGL-EEF 146 RILN K + L P F+ + ++Y+ L ET S + L+ ++G+ E Sbjct: 66 RILNQ--KKERCRKKVLIFDPDYFIHNPEIYQKYVKPLQ-EETAFSHMQLKFKSGMGAEL 122 Query: 147 VEMVTFYVINRLR-------------------------HYREEQVIDDVPQWLKSTVEK- 180 + ++ I+RL H+++E+++ + L ST+++ Sbjct: 123 IHLID--EIDRLNSEKPVGYEMETIGLIYLLLRRLYLAHHQQEKLLQENYD-LNSTIQRK 179 Query: 181 --MHDKEQFSES-ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMT 237 ++ E ++E LE + S+ R + Y GK+P+ +N R+ + + L+ + Sbjct: 180 MTLYIYEHYAEHLTLEKIAQAGLVSKSTCIRLFKEYTGKSPIDFLNRYRLEVSSQLLKNS 239 Query: 238 NYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 + S+TDIAFE G+S S F + FKK +P YR++ Sbjct: 240 HRSITDIAFECGFSQASYFNRQFKKEYGSSPNQYRQQ 276 >UniRef50_C6D083 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D083_PAESJ Length = 291 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 67/256 (26%), Positives = 104/256 (40%), Gaps = 25/256 (9%) Query: 38 GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGIS 97 G H H++ E T V G I G+ V +E G FIP+G H F + + + Sbjct: 34 GEHSHEFVEITYVSEGAGIHYIAGEAVPVEHGTLFFIPVGQSH-VFRPKTPKKDRPLIVY 92 Query: 98 KRFFEQHYLPLL----PY------CFVAS-----QVYRTNNAFLTYVETVISSLNLRETG 142 YL L PY CF V + + + + Sbjct: 93 NCLLPASYLSELRDGFPYATEILDCFADEGLSWFSVKDSTGEYHAMFRELYQEFAAKPPA 152 Query: 143 LEEFVEMVTFYVINRLRHYREE-QVI---DDVPQWLKSTVEKMH--DKEQFSESALENMV 196 + + ++ L YR + Q+I D PQWL S E + D+ SE L + Sbjct: 153 YMAVLASLVMRILTGL--YRHKLQIIAPAGDRPQWL-SVDEAIAFIDRNYASELKLGELA 209 Query: 197 ALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLF 256 A + S+ +R +R+ G + ++ + IR++ A + L + SV DIA GY+ F Sbjct: 210 AQAKLSERQFSRLFRRHTGMSLIEYVQSIRMDAACRLLTTRHSSVEDIAGAVGYADMKFF 269 Query: 257 IKTFKKLTSFTPKSYR 272 + FKK T TP+ YR Sbjct: 270 YRLFKKKTGVTPRQYR 285 >UniRef50_Q0TRX2 DNA-bindng response regulator, AraC family n=12 Tax=Clostridium RepID=Q0TRX2_CLOP1 Length = 250 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 33/110 (30%), Positives = 61/110 (55%), Gaps = 8/110 (7%) Query: 163 EEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQII 222 EE+++D V +++ ++KM LE + ++ S Y +R ++ GKT + I Sbjct: 147 EEKIVDKVSKYIDDNMDKML--------KLEELASICNLSPGYFSRVFKKETGKTVITYI 198 Query: 223 NEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 NE ++ AKK L+ + + +I+ + G+ FI+ FKK+T TPK++R Sbjct: 199 NEKKVERAKKLLKESKDPIINISLDLGFDDCGYFIRVFKKITGLTPKAFR 248 >UniRef50_C0EGN7 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGN7_9CLOT Length = 326 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 67/278 (24%), Positives = 120/278 (43%), Gaps = 30/278 (10%) Query: 21 NGKNFHVFIYNKTESISG---LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLG 77 + KN H+ ++ + E+++ LH+H +YE V G N + ++ G+ + + Sbjct: 50 DAKNLHISLHPRPENVNPKMLLHKHTFYELMYVYRGSCVNHFNENTITIQEGEMLLLNPN 109 Query: 78 SHHQSFYEFGATRILNVGISKRFFEQHYLPLLPY-----------CFVASQVYRTNNAFL 126 + H + N+ + FF Q+ L LL C S + R +L Sbjct: 110 TAHCPETLTDQDCVFNIMFRQNFF-QYSLDLLLKDNTLFSSFFMECMFQSSIARD---YL 165 Query: 127 TYVETVISSLNLRETGLEEF-----VEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM 181 ++ S+ + +E F E +T ++ L Y D+ + K+ E++ Sbjct: 166 FFLPGKASADTIERLIVECFEKQSCYETITQSLLVELFAYLARNS-DNSFSYPKNNHERL 224 Query: 182 ------HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLE 235 + +E +E L+ + S YL+R ++Y GK +I+ + R+ AK LE Sbjct: 225 ILKIITYIQESPAEITLQKVSEQFQYSTAYLSRMIKQYTGKNFSEIVRDCRLTKAKYYLE 284 Query: 236 MTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 ++ S+ DIA GY+ S F K FK+ TP YRK Sbjct: 285 SSSLSILDIALILGYNDVSHFYKVFKQEIGCTPTEYRK 322 >UniRef50_C6L914 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L914_9FIRM Length = 306 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 34/112 (30%), Positives = 66/112 (58%), Gaps = 5/112 (4%) Query: 164 EQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIIN 223 ++ +D V + L E M +K ++ + A + +++Y R ++ G+ P+ +N Sbjct: 200 DRRVDTVKKTLSYMQEHMTEK-----VTMQELAAQANMNEQYFCRFFKKIIGRPPITYLN 254 Query: 224 EIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 E+RI +A + L+ T++SVT+IA E+G+++ F++TF+ + TP YRK L Sbjct: 255 EMRIRYACRLLKETDHSVTEIALESGFNNLGNFMRTFRLVCGCTPLQYRKGL 306 >UniRef50_A7B562 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A7B562_RUMGN Length = 288 Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 62/258 (24%), Positives = 109/258 (42%), Gaps = 43/258 (16%) Query: 47 FTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQS------------------FYE--- 85 F + G+ I+G+ +++E V+IP G FYE Sbjct: 39 FRYIEKGKAELCIDGEEIIVEENQIVYIPQGCKMSCRALGESFEFYSLRFTTSVFYEGED 98 Query: 86 -----FGATRI-LNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLR 139 +G R+ +N G +F++ Y + V R N ++ +I SL + Sbjct: 99 MLAEYYGIPRVSVNEG-EDVYFKEIYKWVKKDSMVKKCFVRGN------LDLLIGSLAMH 151 Query: 140 ETGLE----EFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENM 195 ++ +FVE + + + EQ+ D ++ + +H E+++ + M Sbjct: 152 GNKVDKVTGDFVETIEEKSLRDRNSKKNEQI--DPRIYIVADYIILHPSEKYTPQKMAEM 209 Query: 196 VALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSL 255 LS + L + GKTPM+ + EIR+ A + L ++N ++ DIA+ GY + Sbjct: 210 ADLSKQRFSSLFKINM---GKTPMEYVREIRLTTAARALLVSNDNINDIAYACGYEDTNY 266 Query: 256 FIKTFKKLTSFTPKSYRK 273 FI+ FK FTP YRK Sbjct: 267 FIREFKSAFGFTPNQYRK 284 >UniRef50_C4Z7U7 LacI family transcriptional regulator n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z7U7_EUBE2 Length = 304 Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 5/155 (3%) Query: 124 AFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQ-----VIDDVPQWLKSTV 178 AFL + L + +G + VE+ T Y + +L + + VI+ + S + Sbjct: 128 AFLNLYRDLRHELTKKNSGYQSRVEIATIYWLYKLLSLKHDSTQIHAVINSPKELSASNI 187 Query: 179 EKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTN 238 + E AL+ + S+ Y+ R + Y G T + +N +RI A + LE +N Sbjct: 188 SAYLEANYTKELALDTISDELFMSKYYMCRIFKEYTGFTITEYVNTLRIKKATQILESSN 247 Query: 239 YSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 S++D+A E G+ S S F + FKK+ + TP YRK Sbjct: 248 LSISDVAAELGFESASYFERIFKKIMTVTPLKYRK 282 >UniRef50_C8ZX65 Transcriptional regulator n=1 Tax=Enterococcus gallinarum EG2 RepID=C8ZX65_ENTGA Length = 267 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 71/242 (29%), Positives = 108/242 (44%), Gaps = 14/242 (5%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDF-VFIPLGSHHQSFYEFGATRILNVGIS 97 LH HDYY ++L GR + G+ +LE+GD +F P H E + IS Sbjct: 26 LHFHDYYVVGILLAGRR-KLYCGETQILEKGDLNLFNPYQPHSCQSLENQEITYHALNIS 84 Query: 98 KRFFEQHYLPL-----LPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTF 152 K+ Q + LPY SQV NN+ VE + ++ +++ L + E + + Sbjct: 85 KQAMTQVVKEITGKKDLPY---FSQVILRNNSTGELVEELYQAILSKKSPL--YREELMY 139 Query: 153 YVINRLRHYREEQVIDD-VPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQ 211 +I L Y E ++ V L V K + LEN+VAL+ + Sbjct: 140 LLIENLLAYTAEGYQNEPVENVLLENVCHHLQKNYTEDIRLENLVALTNLKKSSFIHQFT 199 Query: 212 RYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSY 271 + YG TP + + IRI+ AKK L S++++A +S S F FK TPK Y Sbjct: 200 KNYGMTPYRYLLSIRIDEAKKLLAKQQ-SLSEVALMTNFSDQSHFSNVFKSFIGLTPKQY 258 Query: 272 RK 273 +K Sbjct: 259 QK 260 >UniRef50_C7H4U6 Transcriptional regulator, AraC family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4U6_9FIRM Length = 332 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 62/259 (23%), Positives = 108/259 (41%), Gaps = 26/259 (10%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH--------QSFYEFGA--T 89 H H+ +E+ L + G ++N RV L+ VF+ G H ++ G Sbjct: 78 HWHEEFEYILAMKGPLTVDVNKTRVTLQTNQGVFLNSGILHAVEQAEKGEALLHSGVFHP 137 Query: 90 RILNVGISKRFFEQHYLPLL----PYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEE 145 R++ G+ F+++ P+L P F+ + L + ++ + E Sbjct: 138 RLVG-GMDTIFWQKLIRPMLQPDAPAFFLLDEAVPWQAQVLACLREAWQAVAVEPFDYEN 196 Query: 146 FVEMVTFYVINRLRHYREEQVIDD--VPQWLKSTVEKMHDKEQFSES------ALENMVA 197 V +Y+ LR + V V Q + E+M +F E +E + A Sbjct: 197 ---RVRYYLSAALRLLSTQCVGGKTKVSQQEQIAAERMKQMLRFVEEHYAEELTVERIAA 253 Query: 198 LSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFI 257 A S+ R+ ++ G TP+Q + + R+ A + L T +I E G++ S FI Sbjct: 254 SVALSESACLRSFRQMLGITPIQYVKQFRVEKAAELLRSTRLKTGEIGMECGFADGSYFI 313 Query: 258 KTFKKLTSFTPKSYRKKLT 276 KTF+++ TPK YR K Sbjct: 314 KTFREIKHCTPKEYRAKFC 332 >UniRef50_P96660 Uncharacterized HTH-type transcriptional regulator ydeC n=3 Tax=Bacillus RepID=YDEC_BACSU Length = 291 Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 69/271 (25%), Positives = 126/271 (46%), Gaps = 45/271 (16%) Query: 34 ESISG---LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATR 90 ++I+G LH HD +F L+L G +IN +++ + GD +FI G H + + G+ Sbjct: 32 QNINGYIPLHWHDEIQFVLILKGIALFQINEEKIEVHEGDGLFINSGYLHMAEEKEGSDC 91 Query: 91 ---ILNVG----ISKRFFEQHYLPL-----LPYCFVASQVYRTNNAFLTYVETVISSLNL 138 LNV +S+ + + P LPY F+A N L V+ I+ L Sbjct: 92 TYICLNVSPHFVLSQELYSSYVQPYMFSTNLPYLFLAGNQQWAKN-ILDAVKK-INQLIQ 149 Query: 139 RETGLEE------FVEMVTFYVIN----------RLRHYREEQVIDDVPQWLKSTVEKMH 182 ++T L E M V+N ++ +R +Q+++ W+ +H Sbjct: 150 QKTSLYEIDITMQLTLMWKNLVVNGFQLEYDQSEMIKSHRMKQMLN----WIH-----LH 200 Query: 183 DKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 E+ + LE++ S+ R +R KTP++ + + RI + L+ +VT Sbjct: 201 YVEKIT---LEDIAKAGQLSRSECCRYFKRMLNKTPLRYVMDYRIQKSLLLLQHPESNVT 257 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 +++++ G++S S FI F++ + TP SY+K Sbjct: 258 EVSYQVGFNSTSYFISKFQQAMNMTPLSYKK 288 >UniRef50_A5N4U3 Predicted transcriptional regulator n=2 Tax=Clostridium kluyveri RepID=A5N4U3_CLOK5 Length = 298 Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 69/266 (25%), Positives = 108/266 (40%), Gaps = 44/266 (16%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILN------ 93 H H+ +E V++G +N +L + +FI G H +L Sbjct: 42 HWHEDFEIIWVISGSIKVSVNSTEHILNKNQGIFINAGFLHSIHATNDGEYVLRSIVFHP 101 Query: 94 --VGISKRFFEQHYL-PL-----LPYCF-----------------VASQVYRTNNAFLTY 128 +G + Q+Y+ P+ LPY V +++Y T N F Y Sbjct: 102 RLIGSIDSIYWQNYIEPIIQNKNLPYILLDPFINWQDKILAYSISVWNRLYNTENGFEIY 161 Query: 129 VETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFS 188 V +S L L E +R+ R I + Q+++ MH E + Sbjct: 162 VRNELSQLILIVLTNHSICEAKP-----SIRNLRNADRIKTMLQYIQ-----MHFSETIT 211 Query: 189 ESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEA 248 S L VAL ++S+ + R R TP Q + + RI A + L T+ + DIAF+ Sbjct: 212 ISTLAR-VALISESE--VLRCFHRTIHSTPNQYLKQYRIQKACQMLIDTDMTSIDIAFQC 268 Query: 249 GYSSPSLFIKTFKKLTSFTPKSYRKK 274 G+ S S F KTF++ TP YRK+ Sbjct: 269 GFQSSSYFTKTFREQIGCTPLEYRKR 294 >UniRef50_Q485B0 Transcriptional regulator, araC family n=1 Tax=Colwellia psychrerythraea 34H RepID=Q485B0_COLP3 Length = 304 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 62/271 (22%), Positives = 116/271 (42%), Gaps = 35/271 (12%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISK 98 L Q+ F L++ G + ++ K+ L+ GD + +P G+ HQ F + + R+ G+ Sbjct: 31 LDQNQRAYFHLIIRGACYLQLGDKKEQLQGGDIIILPHGTAHQLFDDPSSVRVNATGVVP 90 Query: 99 RFFE----------------------------QHYLPLLPYCFVASQVYRTNNAFLTYVE 130 + ++L LP +Q +RT+ +FL Sbjct: 91 GLIDGINPFEGVGHSQDIDILCGYFNFNNSTPSYFLNALPDVIHLTQEHRTHFSFLDNAL 150 Query: 131 TVISS-LNLRETGLEEFVEMVT-FYVINRLRHY-----REEQVIDDVPQWLKSTVEKMHD 183 + I+ ++ G E ++ VT + +R Y EE + + S ++ Sbjct: 151 SFITQETKMKNLGREILIDRVTELLFVQIMRVYININGNEENIFSALSDRTLSEALQLMH 210 Query: 184 KEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTD 243 E +E++ S+ + Y G+TPM+ ++ R+ AK+++E T ++ Sbjct: 211 TESDKNWTVESLAKAIGMSRSRFSEHFHNYIGETPMRYLHTCRMEVAKQKIEETESTLNI 270 Query: 244 IAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 I+ E GY+S S F K FKK TP ++R+K Sbjct: 271 ISEEVGYASDSAFKKAFKKFFGNTPSTFRQK 301 >UniRef50_A9KRL7 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KRL7_CLOPH Length = 283 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 62/246 (25%), Positives = 105/246 (42%), Gaps = 14/246 (5%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH-----QSFYEFGATRILN 93 H H YE +L G + + G LL++ D FI G H YE N Sbjct: 35 FHWHIEYEIIRILDGEFRLFLEGTEYLLKKDDVAFIKDGKLHGGSPKDCTYE-CIVFDFN 93 Query: 94 VGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVE---MV 150 + + F +L + + ++ + + T+ ++ E G E + ++ Sbjct: 94 ILRQRSFLTDTFLRKIAHQKISIYPVHNKTCITSPLITMFDAIRSEEEGYELSILGSLLL 153 Query: 151 TFYVINRLRHYREEQVIDDVPQ----WLKSTVEKMHDKEQFSESALENMVALSAKSQEYL 206 F + + +Y +E+ D Q LK+++E + + L+ + S +Y Sbjct: 154 FFAALQKNEYYSKEEEYDLKSQKAIEQLKASLELIV-TDYAKPLTLQELSRECGLSPKYF 212 Query: 207 TRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSF 266 R Q Y +TP+ +N RI A Q+ + ++TDIAF G++ S FIKTFKK Sbjct: 213 CRFFQEYTNRTPIDYLNYYRIEQACYQISQSEDTLTDIAFRCGFNDFSYFIKTFKKYKGI 272 Query: 267 TPKSYR 272 TPK Y+ Sbjct: 273 TPKKYQ 278 >UniRef50_Q7UYE3 L-rhamnose operon transcriptional activator n=1 Tax=Rhodopirellula baltica RepID=Q7UYE3_RHOBA Length = 290 Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 61/294 (20%), Positives = 116/294 (39%), Gaps = 33/294 (11%) Query: 9 PE-IATAREQQLFNGKNFHVFIYNKT-ESISGLHQHDYYEFTLVLTGRYFQEINGKRVLL 66 PE I T +++ F+ F + + + + GLH H++ E ++ G+ L Sbjct: 2 PEMIPTLKKEDWFHPDGFPIVVERRDPQEPFGLHCHEFAEIVIITGGKGVHITGEDSYEL 61 Query: 67 ERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPL----------LPYCFVAS 116 GD F+ G + ++N+ F+ LPL F Sbjct: 62 VTGD-TFVIGGDRPHDYLNMDQLSLINI-----LFDPLELPLSIGDLQSLSGYHALFTLE 115 Query: 117 QVYRTNNAF--------------LTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYR 162 +R + F L YVE++ L R G + ++ L Sbjct: 116 PAWRKRHQFTSRLQLNPAELIETLRYVESLDQELKQRSAGFRTMATLTMLQLVTFLSRCY 175 Query: 163 EEQVIDDVPQWLKSTVEKMHDKEQFSES-ALENMVALSAKSQEYLTRATQRYYGKTPMQI 221 + + L+ H + F +L+++V +S S+ R + +P++ Sbjct: 176 IRTRNPESKKLLRIAEAISHIQRHFDRPISLDDLVEISGMSRRNFIRTFEGTMETSPIKY 235 Query: 222 INEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 + ++RI A + L T+ S+TDIAF+ G+S + F + F+ +P+ YRK++ Sbjct: 236 LIQVRIQEASRLLRSTDRSITDIAFDVGFSDSNYFSRQFRTHLGLSPREYRKQM 289 >UniRef50_C0ABA0 L-rhamnose operon transcriptional activator n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0ABA0_9BACT Length = 297 Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 64/262 (24%), Positives = 110/262 (41%), Gaps = 33/262 (12%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNV----- 94 H HD+ E +V GR + G+ + GD VF+ G F E ++NV Sbjct: 42 HWHDFCELAMVTGGRGVHVLEGESFHVSTGD-VFVLQGRQVHCFRERQGLALINVMYDPE 100 Query: 95 GISKRFFEQHYLPLLPYCFVASQVYRTNNAF----------LTYVETVISSLNLRETGLE 144 + LP F+ +R+ + F L E ++ + + Sbjct: 101 RLPLPLGLLRRLPGYSALFMLEPTFRSTHRFSSRLRLARRELGSAEAIVERIENESKAAQ 160 Query: 145 EFVEMVTFYVINRL-----RHY-----REEQVIDDVPQWLKSTVEKMHDKEQFSES-ALE 193 E E V ++ L RHY RE + V Q L S +E ++F E LE Sbjct: 161 EGHEAVLLSLLVELMVLLSRHYAQSDTRESHALLQVGQ-LVSMLE-----QRFGEPWTLE 214 Query: 194 NMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSP 253 + + S+ L R ++ G++P+ + +RI A++ L ++ +T+IA E G+S Sbjct: 215 QLAEQARVSRSNLLRMFRQATGQSPIDFLIGLRIEAARRLLRRSDLGMTEIALECGFSDG 274 Query: 254 SLFIKTFKKLTSFTPKSYRKKL 275 + F + F+K TP YR+++ Sbjct: 275 NFFPRQFRKTCGVTPSIYRRQM 296 >UniRef50_C6JFK6 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFK6_9FIRM Length = 283 Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 52/82 (63%) Query: 195 MVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPS 254 + ALS S+ Y + ++Y GKT + IN++RI AK L ++ SVT+IA E G+++ S Sbjct: 202 LTALSNYSEYYFMKLFKQYTGKTLIAYINDLRIEKAKPMLLHSDSSVTEIALEVGFNNTS 261 Query: 255 LFIKTFKKLTSFTPKSYRKKLT 276 FIK F++ T +P +R+ L+ Sbjct: 262 YFIKKFQQATGMSPHKFRRNLS 283 >UniRef50_C6PNM8 Transcriptional regulator, AraC family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PNM8_9CLOT Length = 335 Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 58/263 (22%), Positives = 113/263 (42%), Gaps = 25/263 (9%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRI-LNVGISK 98 H HDY E V +G Q I V +++G+ + + + H S E I +NV I + Sbjct: 74 HSHDYLEMMFVYSGSIKQIIEDTDVEIKKGEILLMDMNVEH-SIKEAQENDIAINVLIKE 132 Query: 99 RFFEQHYLPLLP----------------------YCFVASQVYRTNNAFLTYVETVISSL 136 FF ++ + CF S+ R + + + + Sbjct: 133 EFFNWIFMNQIADNDLISNFIVKALYNKNKFRQFLCFETSKNKRVWDFMINILIEYYENK 192 Query: 137 NLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMV 196 N ET + ++ ++ ++ Y VI+ V + + K DK +++ L+++ Sbjct: 193 NGMETAIRSYIVLIFNELLRCYNEYLPSSVINKVESNIYVEIVKYIDK-NYNDLNLKDLA 251 Query: 197 ALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLF 256 + S +Y+ + ++ G T ++ +I+++ K L+ +++S+ +I + GYS+ S F Sbjct: 252 NYFSYSTDYMGKLIKKVTGNTLTELQKKIKLDKVKYLLKNSDFSIEEIIRKVGYSNLSYF 311 Query: 257 IKTFKKLTSFTPKSYRKKLTEFN 279 K FK+ TP YRK N Sbjct: 312 YKQFKEDVGMTPDKYRKNSITLN 334 >UniRef50_Q5WIZ4 Putative uncharacterized protein n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WIZ4_BACSK Length = 283 Score = 63.2 bits (152), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 72/278 (25%), Positives = 114/278 (41%), Gaps = 46/278 (16%) Query: 28 FIYNKTESISG---LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFY 84 ++NKT+S H H+++E +V G I+ L GD V +P S H S Sbjct: 18 LVHNKTKSCDDELPHHLHEWHEIIMVHQGTCTFFIDDCFFELASGDIVIVPGNSIHCSLL 77 Query: 85 EFGATRILNVGISKRFFEQHYLPLLPYCFVASQ--------------------VYRTNNA 124 + G T V S +F P L + S+ + R A Sbjct: 78 DKGKT----VTTSALYF----CPSLLASMIGSESDSLHSLFTTAKTTKQYRYYMEREKQA 129 Query: 125 FLTYV------ETVISSLNLRETGLEEFVEMVTFYVI---NRLRHYREEQVIDDVPQWLK 175 FL + ET I+ L ET V ++ Y I +R +E++ VP W+K Sbjct: 130 FLAGLFDEIAKETAIADLYSGET-----VALLIRYAIVFVSRNCGTAQEKLSPLVPAWIK 184 Query: 176 STVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLE 235 ++ + D E L+ + A + Y ++ + G T ++ + R+ AK L+ Sbjct: 185 ESLAYI-DAHLHEELDLKMLAAHACVHPSYFSKKFKASIGLTYIEFLKSKRLVKAKDLLK 243 Query: 236 MTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 T+ S+ IA GY S F +TF+ T TP +YRK Sbjct: 244 TTDLSIQAIAEACGYHSMPHFYRTFRAATGTTPAAYRK 281 >UniRef50_C6J8U5 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8U5_9FIRM Length = 279 Score = 63.2 bits (152), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 9/174 (5%) Query: 109 LPYCFVASQVYRTNNA------FLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYR 162 L + F + YR N L Y ++ L+ + G E + +I +LR Sbjct: 97 LCFSFNGHKEYRIFNCREKKTDLLFYFNSLFQELDRQSEGYETICSHMLDILILQLRRIT 156 Query: 163 E---EQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPM 219 + E + P + +++ D L+++ LS ++ YL+ +YYG +P+ Sbjct: 157 DSPFELITAQHPSKECAHIKRYLDSNYGENITLDHLSELSHLNKYYLSHEFTKYYGISPI 216 Query: 220 QIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 +N RI K+ LE T+Y ++DIA G+SS S ++F+K T +YRK Sbjct: 217 NYLNRKRIEVCKELLENTDYGISDIAHLTGFSSQSYLSQSFRKSCGMTAGTYRK 270 >UniRef50_C1D3S3 Putative transcriptional regulator, AraC family n=1 Tax=Deinococcus deserti VCD115 RepID=C1D3S3_DEIDV Length = 226 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/86 (41%), Positives = 46/86 (53%), Gaps = 3/86 (3%) Query: 190 SALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAG 249 SAL V LS S E L R R TP Q + +R + A + L + SV DIA E G Sbjct: 137 SALAAQVGLSEDSFERLMR---RVCHMTPKQFLLRVRFDAALRLLRESRRSVADIAHECG 193 Query: 250 YSSPSLFIKTFKKLTSFTPKSYRKKL 275 YS S F + F+ +T FTP+ YR +L Sbjct: 194 YSDHSAFSRKFRAMTGFTPQEYRHRL 219 >UniRef50_C6W740 Transcriptional regulator, AraC family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W740_DYAFD Length = 288 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 65/274 (23%), Positives = 112/274 (40%), Gaps = 31/274 (11%) Query: 24 NFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH--- 80 +F +F Y E + H H YE T++L + + E GD V + H Sbjct: 15 SFRIFGYEVKEFDAPWHYHPEYELTVILQSEGIRYVGNSMESFEAGDLVLLGPNLPHCWK 74 Query: 81 QSFYEFGATRILNVGISKRFFEQHYLPLLPYCFV------ASQVYRTNNAFLTYVETVIS 134 + G + V F +L + + + A+Q R N V +++ Sbjct: 75 NTPDSVGPASSIVVQWPAEFMGSGWLNVEEFKSIRRLLQLATQGVRFNQEVSARVLPMLA 134 Query: 135 S-LNLRE-TGLEEFVEMVTFYVINRLRH------------YREEQVIDDVPQWLKSTVEK 180 + L+++ L +F+E++ + H Y + Q I+ V +++ Sbjct: 135 AMLDMQPFPRLMKFLEILELLATVKSIHLLCEQGFTHPLNYEDNQRINTVYNYIRE---- 190 Query: 181 MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYS 240 H E+ + + L +V +S +E +R R K +NE RIN A K L T+ Sbjct: 191 -HYAERITLATLAGLVHMS---EESFSRFFSRTMQKPLFTFLNEYRINMASKMLIETDMQ 246 Query: 241 VTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 V +I+F GY SP F + F+K TP +YR + Sbjct: 247 VAEISFACGYESPPFFFRQFRKFGGITPAAYRNQ 280 >UniRef50_Q39TN8 Two component transcriptional regulator, AraC family n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39TN8_GEOMG Length = 250 Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 68/117 (58%), Gaps = 4/117 (3%) Query: 159 RHYREE-QVIDDVPQWLKSTVEKMHDKEQFSESA-LENMVALSAKSQEYLTRATQRYYGK 216 RHY + + DD+P+ + V MH K + + L+++ + S+ + R ++Y G Sbjct: 132 RHYSDPINLPDDLPESIGRAV--MHIKSNYDCALYLDDLARAAHLSKFHFCRNFKKYIGV 189 Query: 217 TPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 +PM+ +N ++I+ A+ L + +++ +A++ G++ PS F + FK +T +P ++R+ Sbjct: 190 SPMRFMNMVKISKAETLLRRADLTISTVAYKLGFNDPSEFTRQFKSITGISPSAFRR 246 >UniRef50_B6VMW0 Similar to arac-family transcriptional regulator n=3 Tax=Gammaproteobacteria RepID=B6VMW0_PHOAA Length = 322 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 14/167 (8%) Query: 113 FVASQVYRTNNAFLTYVETVISSLNLRETGLEEF---VEMVTFYVINRLRHYRE--EQVI 167 F S Y N+ + VE I N RET + +E + + YR+ + +I Sbjct: 161 FCTSGTYEYNDVMMHIVEQ-IYGYNTRETCSQLIFGNMEGAPPHTLASFVPYRQHSDTLI 219 Query: 168 DDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRI 227 + W+ S + S L N + L + + R + G+TP+Q I +IR+ Sbjct: 220 HKLQDWMHSAPSDI-----LSVGDLANKIHLCERQ---MKRRFKTATGQTPIQYIQQIRL 271 Query: 228 NFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 + AK +LE +N ++ +I+ E GY F + FKKL TP YRKK Sbjct: 272 SLAKYRLEKSNKTIEEISHEVGYEDTRYFRELFKKLNGVTPIEYRKK 318 >UniRef50_UPI00019047EB transcriptional regulator n=1 Tax=Rhizobium etli Kim 5 RepID=UPI00019047EB Length = 388 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/123 (28%), Positives = 61/123 (49%), Gaps = 10/123 (8%) Query: 153 YVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFS-ESALENMVALSAKSQEYLTRATQ 211 Y++ R +Q I WL + FS + LE MV + ++ R Sbjct: 259 YMVFEGRRDHGDQAIQTAQDWLTA---------HFSVANPLEEMVRQAGLTERTFKRRFT 309 Query: 212 RYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSY 271 R G +P+ + +RI AK++LE T SV +I+++ GY P+ F + F+++T P +Y Sbjct: 310 RATGMSPIAYVQRLRIEEAKRRLERTEASVDEISWQVGYEEPAFFRRLFRRITGLAPGNY 369 Query: 272 RKK 274 R++ Sbjct: 370 RRR 372 >UniRef50_A8SS52 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SS52_9FIRM Length = 300 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/112 (33%), Positives = 53/112 (47%), Gaps = 16/112 (14%) Query: 167 IDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGK----TPMQII 222 I D+ W+ + K++ + S + A S R QR + + PM+ + Sbjct: 195 IKDMLGWIDRNL-----KDEITVSGI-------AGSANICVRECQRIFSQYVHYRPMEYV 242 Query: 223 NEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 RI A + L T+ VTDIA E G+SS S FIK FK + TP YRKK Sbjct: 243 QRRRITLAAELLRTTHRQVTDIALECGFSSVSYFIKQFKNIVGCTPTGYRKK 294 >UniRef50_C4G7L2 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G7L2_ABIDE Length = 272 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 57/97 (58%) Query: 178 VEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMT 237 ++K D S+ ++++ LS ++ YL + +Y+G +P+ + IRI AK+ LE + Sbjct: 174 LKKYMDSNYASKITIDDLAKLSNLNKYYLIHSFNKYFGSSPINYLCGIRIRAAKELLENS 233 Query: 238 NYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 +YS++ I+ G+SS S F + F K +PK+YR + Sbjct: 234 DYSISQISQSTGFSSQSYFTQCFIKSCGLSPKAYRNR 270 >UniRef50_D1T9I8 AraC family transcriptional regulator n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1T9I8_9BURK Length = 280 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 60/107 (56%), Gaps = 3/107 (2%) Query: 172 QWLKSTVEKMHDKEQFSES-ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFA 230 +WL +HD+ F ++ L+ + + S ++L R +++YG T + + ++R++FA Sbjct: 169 RWLARVEALLHDR--FRDALTLDEIASDSHVCADHLAREFRKHYGCTVGEYVRQLRLDFA 226 Query: 231 KKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 QL +S+ IA +AG++ S F + F++ TP +YR +L E Sbjct: 227 CAQLTSGRHSLKAIAQDAGFADQSHFTRVFRRRMGLTPGAYRAQLLE 273 >UniRef50_C9KN97 Putative AraC-type DNA-binding domain-containing protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KN97_9FIRM Length = 281 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 70/260 (26%), Positives = 105/260 (40%), Gaps = 45/260 (17%) Query: 39 LHQH-DYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQ---------SFYEFGA 88 +H+H D EF L+ G I+G+R ++GD + I H S Y GA Sbjct: 37 MHRHGDVAEFILITEGSGIHIIDGQRYYTQKGDLLLIGQDVVHDESSPANRNLSIYS-GA 95 Query: 89 TRILNVG--ISKRFFEQHYLPLL-------PYCFVASQVYRTNNAFLTYVETVISSLNLR 139 R L + + +F LP+L +C + +YR + E S+N Sbjct: 96 IRGLQLPNLPAGKFLPPDVLPVLKTEGLFPDFCHLLEFMYRGAQGKGCHPE---ESINHL 152 Query: 140 ETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALS 199 L V VT + V+ L + V D +A + + L+ Sbjct: 153 LCALLLLVMEVTSRSV----------VLPPEEHHLLAGVRSRLD------AAYDETITLA 196 Query: 200 AKSQEY------LTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSP 253 +QE+ L A + YG P+Q I RI A+ L T +T+IA GY+S Sbjct: 197 GLAQEFHVSTFHLAHAFKAAYGYAPLQYITRRRIGEAQTLLIDTALPITEIAIRTGYNSS 256 Query: 254 SLFIKTFKKLTSFTPKSYRK 273 S F K F K+T +P+ YRK Sbjct: 257 SYFNKAFHKITGMSPRDYRK 276 >UniRef50_A7B0Y7 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0Y7_RUMGN Length = 276 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/118 (30%), Positives = 64/118 (54%), Gaps = 5/118 (4%) Query: 162 REEQVIDDVPQWLKSTVEKMHDKEQFSES-----ALENMVALSAKSQEYLTRATQRYYGK 216 R +Q+I ++ T E KE + L+ + L+ ++ Y+ + +Y G Sbjct: 155 RSQQLIPVSINSIRMTKECAQIKEYLDSNYAEHITLDTLTGLTHMNKYYMVHSFTKYAGL 214 Query: 217 TPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 +P+Q +N+ R+ A+ L+ TNYS++DIA G+SS S F + F+K + TP YR++ Sbjct: 215 SPIQYLNQTRLKRAQHLLKNTNYSISDIASSTGFSSQSYFTQIFRKNFNMTPVKYRQE 272 >UniRef50_UPI0001788EB0 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788EB0 Length = 294 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 69/271 (25%), Positives = 112/271 (41%), Gaps = 35/271 (12%) Query: 26 HVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYE 85 H F + E + H H+Y E TLVL G + + + + + GD + IP HH Sbjct: 35 HTFQAEQGEGLFQSHAHEYDELTLVLDGEGYYSSSEQNIKVAAGDLILIPARLHHG---- 90 Query: 86 FGATRILNVGISKRFFEQHYLPLLPYCF--VASQVYRTNNAFL-----TYVETVISSL-- 136 F TR GIS FF Y F + S+ +R ++ L + E L Sbjct: 91 FVCTRPWQ-GISVHFFHDRLPVHCQYLFHEIESKPHRIRSSHLHEDDMRWAEISFYQLEK 149 Query: 137 --NLRETGLEEFVEM-----VTFYVINRLRHYR------EEQVIDDVPQWLKSTVEKMHD 183 N + ++ + M T + R R +E V++ + LK H Sbjct: 150 EWNSKRQDIDAYNMMRIAFETTLLIFQRNRETSIRAAGTDEVVLEAI---LKEIHSSYHT 206 Query: 184 KEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTD 243 + +E A + + S+ L R +G +P Q I +R+ AK+ L T+ ++ Sbjct: 207 QITVNELAARHFI-----SESNLRRKFSESFGVSPKQYIINLRLMEAKRLLRQTDKAIES 261 Query: 244 IAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 I+ E G++S S F + F K TP +RK+ Sbjct: 262 ISAEVGFTSSSRFYEFFTKSNGATPLEWRKQ 292 >UniRef50_Q9KBY8 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus halodurans RepID=Q9KBY8_BACHD Length = 232 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 1/93 (1%) Query: 184 KEQFSES-ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 K+ FSE +LE + A+ Y + + Y G +P + + ++R+ AK+ L T +SV Sbjct: 139 KQHFSEPLSLETLAAIEHYHPAYYSSWFKGYTGMSPSEYLQKLRVKAAKRLLGETTWSVA 198 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 I+ E GY+ PS ++ F K+ TP +YR L Sbjct: 199 RISIEVGYTHPSGLVRAFTKVEGMTPSAYRNTL 231 >UniRef50_A4A7R1 AraC-family transcriptional regulator n=2 Tax=unclassified Gammaproteobacteria RepID=A4A7R1_9GAMM Length = 342 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 52/85 (61%) Query: 191 ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGY 250 ++E++ ALS S R ++ G+TP++ + +RI A+ L+ ++ + DIA+ G+ Sbjct: 237 SVESLAALSGLSPRSFGRRFRKATGETPIRYLQNLRIREARALLQHSDLPLADIAWRCGF 296 Query: 251 SSPSLFIKTFKKLTSFTPKSYRKKL 275 SSPS F + F+ T +P+++R+ + Sbjct: 297 SSPSRFSQAFRSTTDLSPRAFREAV 321 >UniRef50_C6JD68 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JD68_9FIRM Length = 311 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 68/306 (22%), Positives = 127/306 (41%), Gaps = 52/306 (16%) Query: 12 ATAREQQLFNGKNFHVFIYNKTESISG----LHQHDYYEFTLVLTGRYFQEINGKRVLLE 67 +T +E ++ ++F Y I G H H+ E G + E+N +R + Sbjct: 7 STLKEIRVHGTQDFPCAFYQTGTRIKGNMVKHHWHEEVELLYFSGGEFCLEVNMERFNIS 66 Query: 68 RGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTN----- 122 F FI G H E + N + ++ +L + Q+ +TN Sbjct: 67 EECFYFINPGELHSISVEKNGGCVENAVV-------FHMDMLNSAYALDQI-QTNLIQPV 118 Query: 123 -NAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLR--HYREEQVIDDVPQ--WLKST 177 N + + + + E + + E+ + + R +Y E V DD+ + ++KS Sbjct: 119 QNGSIQFPRCLRKNEPAFEPVRKSYEEIRNVFGGDSFRENYYDGEAVTDDITRQLFIKSA 178 Query: 178 V----------------EKMHD-------------KEQFSESA-LENMVALSAKSQEYLT 207 + EK HD +E + E + ++ L +++Y Sbjct: 179 LLRILAVLSANNLFEVTEKNHDHRIETIKTTLTYIQENYKEKIYIRDLAGLIGMNEQYFC 238 Query: 208 RATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFT 267 R ++ G++PM+ +NE RI A L+ ++ +VT+I E GY++ F++ F+K TS T Sbjct: 239 RFFKKVIGRSPMEYVNEYRIKRAIHYLKESDLTVTEICLECGYNNLGNFLREFRKYTSTT 298 Query: 268 PKSYRK 273 P YR+ Sbjct: 299 PLQYRR 304 >UniRef50_Q5WL10 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WL10_BACSK Length = 298 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 70/258 (27%), Positives = 109/258 (42%), Gaps = 35/258 (13%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKR 99 H H+ E VL+G E + L++G +F+ G+ H+ R+ NV S Sbjct: 33 HSHEAAECMHVLSGSCKVETDEGSYQLKKGQIIFLDAGTRHRLIVS-ERCRMFNVEFS-- 89 Query: 100 FFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETG------------LEEFV 147 FEQ P+ ++ + N A V S L L +T +++ Sbjct: 90 -FEQGCTAFPPF----FKLCKENRALGNMVNKQASQLLLHDTDDTYQCLRRLILEVDKKS 144 Query: 148 EMVTFYV-------INRLRHYREEQVID-DVPQWLKSTVEKMH---DKEQFSESALENMV 196 E F V + R+ E +V + D ++K + +H D+E S + + N V Sbjct: 145 EQTDFMVQLLLSEYLIRIAELAEAKVAEPDQQAYVKRALAYIHQNYDRE-VSVADIANSV 203 Query: 197 ALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLF 256 L YL R + + GK+ + + RIN AK L+ T+ S+TDI G +S F Sbjct: 204 HLHPG---YLQRVFKAFTGKSIHEFLISYRINKAKAMLKQTDISITDIPHYIGMNSQQYF 260 Query: 257 IKTFKKLTSFTPKSYRKK 274 TFKK TP YRK+ Sbjct: 261 STTFKKHVKCTPSEYRKR 278 >UniRef50_A5GD53 Transcriptional regulator, AraC family n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5GD53_GEOUR Length = 291 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 57/271 (21%), Positives = 106/271 (39%), Gaps = 16/271 (5%) Query: 15 REQQLFNGKNFHVFIYNKTE---SISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDF 71 R F G VFI +I+ H H Y F L I GK VL + G Sbjct: 22 RYVDCFIGNEIGVFIPAVGPCFYAITPDHSHPAYSFVLTFDSYTRLAIGGKTVLSQPGQI 81 Query: 72 VFIPLGSHHQSFYEFGATRILNVGISKRFFEQ---HYLPLLPYCFVASQVYRTNNAFLTY 128 + I + H R + + I + FE+ Y + P F + + + Sbjct: 82 MAIDPDAVHHEMTADETPRYIAIFIDRDLFEKELGRYPSIRPRPF-RFRTFTPGREMMGL 140 Query: 129 VETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM------H 182 ++ ++ R E + + +++ L + D + + ++ H Sbjct: 141 LKEFMNEAEARLPAREPLLAAIGTRIVHALIRAAHGIITPDASIGNRVEIHRVIEYIQTH 200 Query: 183 DKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 ++ S + + A++A S + +R +R G P+ +N +R+ A+K L SVT Sbjct: 201 AGKKLS---IGQLAAVAAMSTSHFSRIFKRETGHPPLAYLNRVRLEQARKLLRTGECSVT 257 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 +A G++SPS F +F++ +P + K Sbjct: 258 SVALSCGFASPSHFTDSFRRFYGQSPTDFLK 288 >UniRef50_C0EG54 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EG54_9CLOT Length = 346 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 55/259 (21%), Positives = 114/259 (44%), Gaps = 25/259 (9%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGA-TRILNVGISK 98 H+HD++E V G ++ V+L++GD + + H + + G + N+ I Sbjct: 77 HKHDFFELIYVYQGSVINVVDAHEVVLQQGDLCIMNASAVH-TLGKLGKQDTVYNILIKP 135 Query: 99 RFFEQHYLPLLP-----YCFVASQVYRTN---------------NAFLTYVETVISSLNL 138 F Q +L L+ F + +Y+ + + TYV +I + Sbjct: 136 ELFNQAFLGLIAENEIISSFFLNSIYQKSISRNFMTFHTQDFPSDDAETYVHRLIMENHF 195 Query: 139 RETGLEEFVEM-VTFYVINRLRHYREEQVIDDVPQWLKSTVEKM--HDKEQFSESALENM 195 ++ + +E+ + I R Y+ Q + + S V ++ + + + + +++ + Sbjct: 196 KDIYYNKSIEISLVGLFIELTRGYKHRQDQNSSIELGMSNVSQIIAYISDHYKDISIKQV 255 Query: 196 VALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSL 255 + YL+ ++Y KT +I+ IR AK+ L+ + + +I + GY++ S Sbjct: 256 ADHFSYHPNYLSSLLKKYTDKTFSEILQNIRFTAAKEYLQKLDIPINEIVYMVGYTNKSH 315 Query: 256 FIKTFKKLTSFTPKSYRKK 274 F +TFK+ TP YRK+ Sbjct: 316 FYRTFKQEMGITPAQYRKQ 334 >UniRef50_Q2CI77 Transcriptional regulator n=4 Tax=Rhodobacteraceae RepID=Q2CI77_9RHOB Length = 291 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 1/105 (0%) Query: 169 DVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRIN 228 + P WL D + F E A A + ++ +++R T+R+ GK+P +IIN R+ Sbjct: 178 EAPSWLARACAAAEDPKTFREGAAGFARA-AGRAHPHVSRTTRRFLGKSPSEIINAQRMA 236 Query: 229 FAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 +A ++L T+ S+ +IA + G + S F K F+ TP+ YR+ Sbjct: 237 YAARRLTSTSDSLAEIAADCGIPNLSHFHKLFRSHHGVTPQRYRR 281 >UniRef50_B7DQ49 Transcriptional regulator, AraC family n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DQ49_9BACL Length = 344 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 66/283 (23%), Positives = 119/283 (42%), Gaps = 33/283 (11%) Query: 20 FNGKNFHVFI----YNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIP 75 F+ + +HV + Y +T + LH H EF +V G ++ +R +L GD + Sbjct: 61 FHIRAYHVVLTPGPYQQTVN---LHWHSEAEFIVVTRGSVCLQVGSERHVLADGDVALLS 117 Query: 76 LGS-HHQSFYEFGATRILNV--------GISKRFFEQHYL-PLLPYCFVASQVYRTNNAF 125 G H + G + + G S +Q YL PL + ++ Sbjct: 118 GGELHSMAAPGKGPSECKAIVFGLDLLEGPSSDRVQQSYLSPLASGKLLLPGAIAHDHPV 177 Query: 126 LTYVET----VISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQ--------- 172 Y+ ++ +L + G E V+ + V+ +L +R E +++ P+ Sbjct: 178 RQYLAARLCEIVEALEEQPVGYELAVKGCLYDVLAQL--FRAELLVEHSPRREMDDRRAD 235 Query: 173 WLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKK 232 LK+ + + D + L ++ ++ S+ + R + + PMQ +NE R+ A Sbjct: 236 TLKAVLTYI-DAHLSDKLRLADLARVANMSEGHFCRFFKEMTHRKPMQYVNERRVARAAD 294 Query: 233 QLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 L+ N S+T I + G+ S FIK F+ TP +YRK L Sbjct: 295 LLKDPNRSITAIGMDLGFHDVSYFIKVFRSYKHCTPLAYRKAL 337 >UniRef50_Q93PA7 MS124, putative transcriptional activator n=1 Tax=Microscilla sp. PRE1 RepID=Q93PA7_9SPHI Length = 283 Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 70/297 (23%), Positives = 127/297 (42%), Gaps = 41/297 (13%) Query: 2 MQPV---INAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQE 58 M+PV +N E+ T H FIY+K S H H YE TL+L G + Sbjct: 1 MKPVLEKVNLKELETV-----------HAFIYSKPTFESPWHFHPEYELTLILKGSGIRY 49 Query: 59 INGKRVLLERGDFVFIPLGSHHQSFYE-----FGATRILNVGISKRFFEQHYLPLLPYCF 113 + + GD V LGS+ ++ G ++ L + ++ LPL + Sbjct: 50 VGDDISDFKEGDLVM--LGSNLPHCWKNDQEHTGESKSLVIQWPEKTIGD--LPL--FNG 103 Query: 114 VASQVYRTNNAFLTYVETVISSLNL-----RETGLEEFVEMVTFYVINRLRHYREEQVID 168 + + + ++ E + + NL +G++ ++ ++ +++ L E I Sbjct: 104 IKTLMTKSQRGLRLGAEILNRTSNLMYKVLESSGIQRYLRLIE--LLDHLAEQAEHNFIT 161 Query: 169 DVP---QWLKSTVEKMHDKEQFSESALENMVALSAKSQEY--LTRATQRYYGKTPMQ--- 220 ST ++ + F ++ + + LS + E +A R++ KT + Sbjct: 162 GASYSYDLSSSTTNRLDTVQTFVKNRYKGKIRLSDVADELNMSEQAFSRFFSKTMNKPFF 221 Query: 221 -IINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 +NE R+N A + + T+ + +IA++ GY S F K FKKL +TP +RK T Sbjct: 222 LFLNEYRVNIASRMILETDLQMAEIAYKCGYDSLPFFYKQFKKLKGYTPLDFRKMYT 278 >UniRef50_UPI0001C37EF8 AraC family transcriptional regulator n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37EF8 Length = 287 Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 1/94 (1%) Query: 185 EQFSES-ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTD 243 + FSE +LE + + S+ YLTR ++ YG+T Q I +RIN+ KK L ++ S+ + Sbjct: 194 DHFSEDLSLERLSSEFYISKFYLTREYKKIYGRTIFQHIINVRINYGKKLLRFSDRSIDE 253 Query: 244 IAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 IA G++ S F + FKK + T SYRKK E Sbjct: 254 IAHMCGFNDQSYFARQFKKAENLTCFSYRKKWRE 287 >UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RR78_9CLOT Length = 281 Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 63/251 (25%), Positives = 104/251 (41%), Gaps = 23/251 (9%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYE--FGATRILNVGIS 97 H H YYE +L+G+ IN LE GD IP H++ YE + A R GI Sbjct: 36 HYHSYYEIYYLLSGKCKMFINQDIYYLEPGDMTIIPPLEVHKALYEPSWEAERF---GIY 92 Query: 98 KRFFEQHYLPLLPYC------FVASQVYRT-NNAFLTYVETVISSLNLRETGLEEFVEMV 150 F L C + SQ RT + F +E +++ + E + + ++ Sbjct: 93 --FSRDTVTSFLSLCGREAFGHIFSQPKRTIPSEFRPKIEELLAQMQDEEKQGDSYCQIQ 150 Query: 151 -------TFYVINRLRHYREE-QVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKS 202 V+ R + R E +++ + + M+ Q L + A + S Sbjct: 151 LCSLLHQILVVLGRCQEARREGHALEEAEEAMVRAARYMNQHYQ-EGVTLGQVAAFANMS 209 Query: 203 QEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKK 262 Y ++ + G + +N IR+ A L T+ SVT +A G+S + F F++ Sbjct: 210 PTYFSKKFKSSTGLCFKEYLNYIRVQKASDMLRNTDLSVTGVAMACGFSDGNYFGDVFRR 269 Query: 263 LTSFTPKSYRK 273 LT +P+ YRK Sbjct: 270 LTGVSPREYRK 280 >UniRef50_C8NIW5 AraC family transcriptional regulator n=2 Tax=Granulicatella RepID=C8NIW5_9LACT Length = 282 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 53/83 (63%) Query: 192 LENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 LE + +++ S+ Y++ + ++ G +PM+ + IRI +K L TNYS++ +A G++ Sbjct: 194 LEALASMTHLSRFYISHSFKKEVGMSPMEYLMTIRIKESKILLRTTNYSISQVADIVGFT 253 Query: 252 SPSLFIKTFKKLTSFTPKSYRKK 274 +P+ F K F+K+T +P YR+K Sbjct: 254 TPTYFSKQFRKITGISPTDYREK 276 >UniRef50_C7PA24 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PA24_CHIPD Length = 292 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 65/279 (23%), Positives = 120/279 (43%), Gaps = 30/279 (10%) Query: 17 QQLFNGKNFHVF-IYNKTESISGL-HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFI 74 Q+L +G+ + ++ +S + H+HD+YE LV G IN K+ ++ G FI Sbjct: 18 QELLDGEYMRIVRLHKDINHLSVIPHRHDHYELMLVTAGTGTHAINFKKFGIQPGRLYFI 77 Query: 75 PLGSHH--QSFYEFGATRILNVGISKRFFEQHYLPLLPY--------CFVASQVYRTNNA 124 G H F G + + KRF + H P+ F + + Sbjct: 78 HPGQVHLIAPFDRDGWLIMFGEELFKRFLKIH-----PHEDGRGLLDAFASGPYIDLHPQ 132 Query: 125 FLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREE-QVIDDVPQWLKSTVEKMHD 183 + +I L + TG + V+++ YV L Y ++ Q+ +PQ + E +H Sbjct: 133 LSLVTDFIIEQLCIALTGTKPDVDIILHYVSLLLLQYNQQHQLQHPLPQASLAQRELLHK 192 Query: 184 KEQFSESALE---------NMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQL 234 +Q E N + K + RA+ G T +++ E + +K L Sbjct: 193 LKQRIERNFRQEHQAAFYANHLRTDIKKLNNICRAST---GLTVFELLQERLVTESKILL 249 Query: 235 EMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 + + +V +I+++ G++ P+ F + FKK T TP ++R+ Sbjct: 250 QTSVQTVKEISYDLGFNDPAFFGRFFKKHTGLTPAAFRQ 288 >UniRef50_C6JCM1 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCM1_9FIRM Length = 303 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 55/272 (20%), Positives = 115/272 (42%), Gaps = 22/272 (8%) Query: 28 FIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG 87 ++ N + LH H+Y E G F ++ +F IP H + + G Sbjct: 22 WVQNYGNDVDYLHFHNYLEIGFCYEGDGFMAFGEAKMRFSGREFTVIPPNYAHTTNSDLG 81 Query: 88 ATR-----ILNV-GISKRFFEQHYLPLLPYCFV----ASQVYRTNNAFLTYVETVISSLN 137 ++V G K+F P+ + + ++ N F + ++ +N Sbjct: 82 TVSKWEYLFIDVEGFMKKFLNN---PVKAEKMIQRIYSKALFLKENEFPSIAAKILKIMN 138 Query: 138 LRETGLEEFVE-----MVTFYV-INRLRHYREEQVIDDVPQWLKSTVEKMHDKEQF---S 188 + G E ++E + V I RL E +++ L + + ++ D + Sbjct: 139 IMREGEEFYIEESSGVLAALLVEIARLNRASPEDRVEEETGKLTNMITRVLDFVSYHYME 198 Query: 189 ESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEA 248 + +E++ + S+ + R + +P++ IN +RI+ A + L+ T+ V DIA + Sbjct: 199 DIRIEDLAKICHISETHFRRVFTSHMKVSPLEYINSVRIHTACEFLQKTDIPVADIAHKC 258 Query: 249 GYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 G+++ S F + F+++ TP +RK+ + Q Sbjct: 259 GFTTNSTFNRNFRQIMGVTPVEWRKRPENYEQ 290 >UniRef50_UPI000178960C transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178960C Length = 743 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 44/131 (33%), Positives = 67/131 (51%), Gaps = 11/131 (8%) Query: 143 LEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKS 202 LE+F E RL R + ++ Q +K+ +EK + K + S L++ +S K Sbjct: 622 LEQFAE--------RLDTQRNLRSQGNLVQEVKAYIEKHYTKAELSLDYLQDKFGISGK- 672 Query: 203 QEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKK 262 YL+R + YG + + ++RI AK+ L + SV +I GYSSP F +TFKK Sbjct: 673 --YLSRLFKEEYGLKFVDFLIDLRIQEAKRLLTESALSVQEITERVGYSSPISFARTFKK 730 Query: 263 LTSFTPKSYRK 273 +T P YRK Sbjct: 731 ITGVPPMDYRK 741 >UniRef50_A8GCV2 Transcriptional regulator, AraC family n=18 Tax=Gammaproteobacteria RepID=A8GCV2_SERP5 Length = 281 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 1/86 (1%) Query: 191 ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGY 250 ALE + AL+A S + R +R + TP Q+I+++R+ A +L ++ +TDIA + GY Sbjct: 196 ALEELTALTALSVAQIERYCKRIFHLTPRQMIHKVRLEKAT-ELLASDLPITDIALQCGY 254 Query: 251 SSPSLFIKTFKKLTSFTPKSYRKKLT 276 + S F + FK +T TP+ +R +T Sbjct: 255 TDHSAFSRQFKAMTGSTPRDFRISIT 280 >UniRef50_B1MLH4 Probable transcriptional regulator, AraC family n=1 Tax=Mycobacterium abscessus ATCC 19977 RepID=B1MLH4_MYCA9 Length = 269 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 61/226 (26%), Positives = 102/226 (45%), Gaps = 27/226 (11%) Query: 62 KRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYL-PLLPYCF-----VA 115 +R L + GD + +P+GS + I R +Q L P + Y +A Sbjct: 59 RRYLPKVGDVLVVPMGSRAAITTQGERASFCRFDIPTRLLDQRDLQPRVAYSDPLILQLA 118 Query: 116 SQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLK 175 S++Y + VI+ L LRE+ ++V ++ + HY + + + L Sbjct: 119 SRMYSVADR-----TDVIARL-LRES----LADVVRLHLSD---HYAALRPRPERRRLLD 165 Query: 176 STVEKMHDKEQFSESALENMVALSA------KSQEYLTRATQRYYGKTPMQIINEIRINF 229 S ++ ++ E L+ ++LSA S +A +G TP Q + + R++ Sbjct: 166 SAMQAR--VTEYIEDGLDADISLSALAGHAQMSTSEFRKAFTEVFGHTPYQFVLDRRMSR 223 Query: 230 AKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 AK+ L T+ SVTDI+ G+SSPS F TFK TP +YR + Sbjct: 224 AKQLLATTDLSVTDISVAVGFSSPSHFATTFKTRIGVTPTAYRSGV 269 >UniRef50_C7PIS8 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PIS8_CHIPD Length = 266 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 64/250 (25%), Positives = 112/250 (44%), Gaps = 35/250 (14%) Query: 37 SGLHQHDYYEFTLVLTGRYFQEINGKRVLLE-RGDFVFIPLGSHHQSFYEFGATRILNVG 95 S H H F+ +L+G QEI G++ + G ++ G HQ+ + TRI N+ Sbjct: 38 SDWHYHVNPHFSHILSGGS-QEIRGRKADQQIAGAGLYYYPGIVHQNVHYRPGTRIFNLE 96 Query: 96 ISKRFFEQHYLPLLPYCFVASQVYRTNNAFLT----------YVETVISSLNLRETGLEE 145 I+ FF + + + P S +Y +N T Y S L++ + + Sbjct: 97 IADSFFSTYNIKIPP----ESLMYESNTVLNTGGLLRILKEHYYNDDCSILSIEQLSISL 152 Query: 146 FVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHD--KEQFSESALENMVALSAKSQ 203 M VI + HY P+W + + M+D E S L V + + Sbjct: 153 ---MDANPVIEK--HY---------PEWTRQIINVMNDVWNEPLSLKELAAQVNIHPVT- 197 Query: 204 EYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKL 263 L++ +Y+ T + +I+++ A + YS+T+IA+ +G++ + F KTF+++ Sbjct: 198 --LSKYFTKYFSCTLGEYFRKIKVDRALSLIRSQKYSLTEIAYMSGFTDQAHFTKTFQQI 255 Query: 264 TSFTPKSYRK 273 T PKSYRK Sbjct: 256 TGMLPKSYRK 265 >UniRef50_B9IXY7 Transcriptional regulator, AraC/XylS family n=7 Tax=Bacillus cereus RepID=B9IXY7_BACCQ Length = 286 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 61/93 (65%), Gaps = 1/93 (1%) Query: 184 KEQFSES-ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 K+ F E+ +L+ + ++S ++ YL+ + +++ G +P++ + + RI +K LE TNYS++ Sbjct: 181 KQHFHENISLDTLASISHINKYYLSHSFRKFVGVSPIEYLIQTRIRESKILLETTNYSIS 240 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 +I+ G+SS S F ++FK+ T+ +P YR + Sbjct: 241 NISTITGFSSQSFFAQSFKRETNLSPSQYRNAI 273 >UniRef50_B1QXT7 Transcriptional regulator, AraC family n=3 Tax=Clostridium RepID=B1QXT7_CLOBU Length = 289 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 3/127 (2%) Query: 149 MVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHD--KEQFSES-ALENMVALSAKSQEY 205 M++ +++N LR ++ + + L K+ + +SE+ LE + LS ++ Sbjct: 155 MLSLFILNILRTIPSMSILQNEKKNLNLECAKIKNYLDSHYSENITLETLSNLSYMNKFS 214 Query: 206 LTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTS 265 L A + G +P+ + E RI AK LE TNYS+ DI G+S+ S F + FKK T+ Sbjct: 215 LVHAFTKQIGMSPISYLIEKRITEAKSLLETTNYSIKDIGSIVGFSNSSYFSQMFKKQTN 274 Query: 266 FTPKSYR 272 +PK Y+ Sbjct: 275 LSPKQYK 281 >UniRef50_Q4V1B1 MSM (Multiple sugar metabolism) operon regulatory protein n=15 Tax=Bacilli RepID=Q4V1B1_BACCZ Length = 301 Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 16/112 (14%) Query: 184 KEQFSESALENMVALS----------------AKSQEYLTRATQRYYGKTPMQIINEIRI 227 K++FS A+E M+ + A ++ +L+R Q ++G + I +RI Sbjct: 167 KQKFSRLAIEAMIYIGKHYIEEITVSDVANHLAVNRSHLSRVFQNHFGISMKDWIIRMRI 226 Query: 228 NFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFN 279 N A L MTN SV +I+++ G+ S + F + FKK+T TP YRK++++ N Sbjct: 227 NHAAYLLSMTNESVENISYQVGFHSLAAFSRIFKKVTKETPTHYRKRMSKDN 278 >UniRef50_Q21KB5 Transcriptional regulator, AraC family with amidase-like domain n=2 Tax=Alteromonadales RepID=Q21KB5_SACD2 Length = 330 Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 8/100 (8%) Query: 173 WLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKK 232 WL+ K E L ++ L + S TR + G+TP+ + IRI+ AK Sbjct: 229 WLRDNFAK--------EIKLNDVAQLFSMSPRTFTRRFKSATGRTPLHYLQNIRIDVAKD 280 Query: 233 QLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 L+ +N SV++I F GY P+ F FKK TP YR Sbjct: 281 LLQTSNLSVSEIMFRVGYHDPTHFTNLFKKSLGVTPSQYR 320 >UniRef50_C9KMM0 Putative AraC-type DNA-binding domain-containing protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMM0_9FIRM Length = 248 Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 64/248 (25%), Positives = 99/248 (39%), Gaps = 15/248 (6%) Query: 39 LHQH-DYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGIS 97 +HQH D E LV GR I+ L GD +F G H G +G+S Sbjct: 1 MHQHEDRAEIILVTGGRGSFNIDTGHYLASPGDVLFFDSGILHDETTIDGDLATSCLGVS 60 Query: 98 ------KRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVT 151 +R E P + +Q F T V+ ++ ++ +T Sbjct: 61 DFQLPGRRANEMVGRLYAPQLSLDAQFDAVRTLFHTAVQLALAG------DAPCVLDQLT 114 Query: 152 FYVINRLRHYREEQVIDDVPQW--LKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRA 209 ++ +L PQ L TV+ D L+++ A + YL A Sbjct: 115 CAILCKLDEELARHGQPPRPQQESLGLTVKAYIDAHYRESITLQSIAAELNFNPYYLAHA 174 Query: 210 TQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPK 269 + + G +PMQ I RI A+ L T+ S+T+IAF GY++ + F FK+L TP Sbjct: 175 FREHIGYSPMQYIIRRRIGEAQNLLIGTDRSITEIAFSCGYNNSNYFQSVFKRLVGMTPG 234 Query: 270 SYRKKLTE 277 YR+ + Sbjct: 235 QYRRDWVQ 242 >UniRef50_C6LL87 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LL87_9FIRM Length = 287 Score = 60.1 bits (144), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 34/90 (37%), Positives = 54/90 (60%), Gaps = 1/90 (1%) Query: 185 EQFSES-ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTD 243 E ++E +LE + +L+ S+ + TR ++Y T + +N+ RI AK L N SV D Sbjct: 192 EHYAEPLSLEEVASLAGFSKYHFTRLFKQYADTTFYKYLNQKRIAHAKHLLVDKNLSVLD 251 Query: 244 IAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 I+ + G+S+ S F++ F+KLT FTP RK Sbjct: 252 ISLQCGFSNLSSFLRMFRKLTGFTPTELRK 281 >UniRef50_C8NDY5 AraC family DNA-binding response regulator n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NDY5_9LACT Length = 512 Score = 60.1 bits (144), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 54/96 (56%), Gaps = 3/96 (3%) Query: 182 HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSV 241 H KE S S L +MV LSA ++L R ++ G+T ++ I + RIN +K+ L T + Sbjct: 420 HYKEDLSRSTLADMVYLSA---DHLARIFKKETGETLVKYITDKRINASKELLSETKTPI 476 Query: 242 TDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 +A E GY + S F K FK+ +P YRK+ T+ Sbjct: 477 AQVASEVGYDNYSYFTKIFKEKIGVSPGDYRKQHTD 512 >UniRef50_D1CGI0 Transcriptional regulator, AraC family n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CGI0_THET1 Length = 278 Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 53/92 (57%) Query: 183 DKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 D++ +E +LE+M A + S EYL R + Y G +P+ + R++ A L +NY++T Sbjct: 171 DEDPSAEISLEDMAAHAGVSPEYLCRLFRSYTGLSPLGTVRICRLDRAAMLLLRSNYTIT 230 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 I+ G+SSP F + FK+L +P RK+ Sbjct: 231 QISRIYGFSSPFHFSQRFKELYGKSPSQLRKE 262 >UniRef50_C0WDW3 Predicted protein n=2 Tax=Acidaminococcus sp. D21 RepID=C0WDW3_9FIRM Length = 311 Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 62/249 (24%), Positives = 104/249 (41%), Gaps = 23/249 (9%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISK 98 +H H + V G +NG L+R +FI H S + L + K Sbjct: 57 IHWHQEMQLLWVYDGTLSYRVNGMEFPLDRSQLLFINDSILHSSHPITTEVKTLCINFRK 116 Query: 99 RFF-----EQHYLPLL--PYCF-----VASQVYRTNNAFLTYVETVISSLNLRETGLEEF 146 F Q PL PYC + +Q F+ +V+ ++ +E Sbjct: 117 DIFPSALWNQFLRPLTENPYCTYELINLNAQSLEKLGRFIHHVDDSTGLFSVTTFIMEVM 176 Query: 147 VE-MVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAK-SQE 204 E M TF ++ E + D + ++K + FSES + ++ +A ++ Sbjct: 177 EEIMETFEESGEAKNTEERVLFDGILSFIK---------DHFSESLTISQLSTAAHLNKN 227 Query: 205 YLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLT 264 LT Q+Y G P+ +N R++ A+ QL + SV++I+ + GY S FI+ F+K Sbjct: 228 KLTALFQKYTGMPPIHFLNTYRLDEARTQLLKSARSVSEISEDVGYGQISHFIQQFRKRY 287 Query: 265 SFTPKSYRK 273 TP YR+ Sbjct: 288 GMTPLQYRR 296 >UniRef50_C0EAQ5 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EAQ5_9CLOT Length = 329 Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 64/264 (24%), Positives = 117/264 (44%), Gaps = 30/264 (11%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKR 99 H HDYYE V G + V+L +GD + + H + N+ +S+ Sbjct: 68 HNHDYYEMVYVYRGGCVNNFRDQEVILSQGDVLLMNPNVLHSIHTLREEDCVFNIMLSRS 127 Query: 100 FFEQHYLPLLPYC-----FVASQVYRTNNA--FLTY-------VETVISSL-----NLRE 140 FE+ L LL F+ S +Y+ N + FL + V+ ++++L + Sbjct: 128 LFEESMLLLLSDNKLLSNFIVSYLYQINTSQEFLYFPSPKNEQVDDIVTNLIYEFSDRGP 187 Query: 141 TGLEEFVE---MVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM----HDKEQFSESALE 193 TG V+ V F ++ R+ + + Q+ D+ L ++ + + S + LE Sbjct: 188 TGSASVVQHLLAVLFSLLARI-YAEQNQIHTDMHTKLSPLLDIISYINQNSRTVSLAVLE 246 Query: 194 NMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSP 253 + SA Y++R +++ G++ Q++ ++ A++ L+ T SV +A EAG+ Sbjct: 247 EKFSYSAG---YISRLIKQHCGQSFTQLVQNAKLQRAREILKNTGTSVVQVAEEAGFQDS 303 Query: 254 SLFIKTFKKLTSFTPKSYRKKLTE 277 F + FK+ TP YRK E Sbjct: 304 QYFSRLFKEKFGLTPSQYRKLCQE 327 >UniRef50_A7VQ18 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VQ18_9CLOT Length = 280 Score = 59.7 bits (143), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 66/272 (24%), Positives = 120/272 (44%), Gaps = 24/272 (8%) Query: 23 KNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQS 82 +N +Y + H H + E G ++NG+ + GDFV I H + Sbjct: 12 RNLPFSVYIAQDEKFSWHCHKHMELDYCSEGHCTIKVNGESYDCQPGDFVIIHTMEDH-T 70 Query: 83 FYEFGATRILNVGISKRFFEQHYLP------LLPYCFVASQVY--RTNNAFLTYVETVIS 134 ++L V + + + P L+P+ S Y R + +E+++S Sbjct: 71 LIRNSDCKLLGVQMDLSVLDTAFSPFYESQYLVPF-IRGSGKYQRRIRVPKGSLLESILS 129 Query: 135 SLNL----RETGLEEFVE-----MVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKE 185 + + ++ G E +++ + + V ++ E V + +K ++ M E Sbjct: 130 EILVEYQKKQPGYEMYIKGDILRLFSCLVRTKVIEIGERNVNFQDLERIKPVIDYM---E 186 Query: 186 QFSESALENMVA--LSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTD 243 Q E+ L A ++ S + R ++ GKT ++ N IRI A+K L T+ ++T+ Sbjct: 187 QHIETELSVAAAAKIACMSYYHFCRLFKKVIGKTFVEYQNFIRIRRAEKLLITTDRTITN 246 Query: 244 IAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 IAFE G+ S + F + FKK T P +YRKK+ Sbjct: 247 IAFETGFGSVAYFNRVFKKETGQAPANYRKKM 278 >UniRef50_C9KMM6 Putative AraC-type DNA-binding domain-containing protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMM6_9FIRM Length = 241 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 58/244 (23%), Positives = 105/244 (43%), Gaps = 10/244 (4%) Query: 39 LHQHDY-YEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGIS 97 +H+HD+ E LV G I+G+R ++G+ + + H F G + ++ I+ Sbjct: 1 MHEHDHLCELLLVSQGAGIYMIDGRRYTAQKGNLIIYNSRTVHDEFGGSG-SNLVTYCIA 59 Query: 98 KRFFEQHYLP---LLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYV 154 LP LLP + Q R + A V+++ ++ E +T + Sbjct: 60 IGGLRIDGLPADHLLPDGYCPVQPLRQHFA---EVQSLFDAIEKEAKSHAEIANYLTMAL 116 Query: 155 INRLRHYREEQVIDDVPQW--LKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQR 212 I +L + E+ + + Q L + DK L ++ + + YL+ + Sbjct: 117 ITKLAAFLREEGLQEEQQTPTLAARARAFIDKNYKEAIRLGDIATATHTNAYYLSHLFKA 176 Query: 213 YYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 G +PM+ + RI A+ L T+ ++T IA + GY++ + F FK TP YR Sbjct: 177 EIGLSPMKYVILRRIGEAQNLLINTDMTITQIAAQVGYNNSNYFQNVFKGALDMTPGEYR 236 Query: 273 KKLT 276 +K T Sbjct: 237 RKWT 240 >UniRef50_C0EGL1 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGL1_9CLOT Length = 316 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 60/257 (23%), Positives = 111/257 (43%), Gaps = 20/257 (7%) Query: 37 SGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGI 96 +G H HD++E V G + I+ + + V + LG+ H + E + N+ + Sbjct: 61 TGFHYHDFFEMIYVYRGSFMHTIHDETLRQTEDQVVLLNLGAVHSVWVESKDDIVFNIMM 120 Query: 97 SKRFFEQHYLPLLP-----YCFVASQVYRTN--NAFLTYVETVISSLNLRETGLEEFVE- 148 K E +L + Y F V+ N ++F+ SL L + +EE+ E Sbjct: 121 KKSVVENIFLQITSKDHPIYNFFLDSVFGINKLSSFIVLEMNQGISLILNKI-IEEYYER 179 Query: 149 ------MVTFYVI----NRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVAL 198 ++ Y++ R YR + + P KS+ + K+ ++ LE++ + Sbjct: 180 KVYNRSIILAYLLVLFSELARKYRSDNNLV-APDHTKSSDILHYIKQNYASLTLESLADM 238 Query: 199 SAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIK 258 S+ ++ R + KT +I + +I ++ TN ++ I AG+S PS F K Sbjct: 239 FGYSRHHMGRLILSWTNKTFTDLITDYKIQSVCSLVQNTNLPISKIVEIAGFSDPSHFYK 298 Query: 259 TFKKLTSFTPKSYRKKL 275 TF+K +YR+ L Sbjct: 299 TFQKKMGIHFSTYRQHL 315 >UniRef50_UPI0001C373B4 transcriptional regulator, AraC family protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C373B4 Length = 248 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 41/134 (30%), Positives = 70/134 (52%), Gaps = 9/134 (6%) Query: 143 LEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDK--EQFSESALENMVALSA 200 L+ F EM T Y R+ R+ VI ++ ++ ++D E + L V L + Sbjct: 114 LDIFDEMRTDYA-RRMHELRKSNVI---SLHIRKCIDYIYDHLHEDLTVKTLAEAVGLES 169 Query: 201 KSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTF 260 YL++ + G T IN+ +I+ A+ L+ +++S ++I+F G+SS S FI F Sbjct: 170 T---YLSKLFSKETGTTIRHFINKAKIDTAQNLLKYSDHSCSEISFALGFSSQSAFISVF 226 Query: 261 KKLTSFTPKSYRKK 274 KK T TP+ YR++ Sbjct: 227 KKGTGLTPRQYREQ 240 >UniRef50_A4VLS2 Transcriptional regulator n=6 Tax=Pseudomonas RepID=A4VLS2_PSEU5 Length = 377 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 41/127 (32%), Positives = 70/127 (55%), Gaps = 10/127 (7%) Query: 154 VINRLRHYREE----QVIDDVPQW-LKSTVEKMHDK--EQFSESALENMVALSAKSQEYL 206 ++ LRHYR+ + + +P + L+ + M+++ E+FS +AL +V LS + + Sbjct: 253 AVHLLRHYRDPHGGVRRSNALPAYKLRKVIGVMNERLAEEFSLAALAQVVELS---EYHF 309 Query: 207 TRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSF 266 +R +R G +P Q +R+ A++ L T S+ DI E GYSSPS F + F++ Sbjct: 310 SRMFKRATGLSPSQYFIGLRMARARQLLLETPRSIIDIGLEVGYSSPSHFSQVFRREVGV 369 Query: 267 TPKSYRK 273 TP YR+ Sbjct: 370 TPSIYRQ 376 >UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MKI2_9FIRM Length = 284 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 46/83 (55%) Query: 192 LENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 LE + ++ Y RA + Y GKTP++ +N RI A + + T+ + DIA + G++ Sbjct: 200 LEELANECGMNRNYFCRAFKEYTGKTPVEYLNYFRIESACELIASTDEKLIDIAMKCGFN 259 Query: 252 SPSLFIKTFKKLTSFTPKSYRKK 274 S FIK FK + TP+ Y ++ Sbjct: 260 DYSYFIKVFKSMKGVTPRDYCRR 282 >UniRef50_B1MCK7 Putative transcription regulator, AraC family n=1 Tax=Mycobacterium abscessus ATCC 19977 RepID=B1MCK7_MYCA9 Length = 364 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 10/120 (8%) Query: 153 YVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQR 212 YVI R R E + ++ W++ + E +LE++ ++ S L R + Sbjct: 247 YVIRNRR--RAEVSLGEILAWIEHNAHR--------ELSLEDLATEASTSVRSLNRRFRA 296 Query: 213 YYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 G+TPMQ + +R+ A++ LE + SV I E G+ SP+ F + F++LT +P +YR Sbjct: 297 ETGQTPMQWLTGVRVRHAQQLLERSADSVEWIGREVGFGSPANFREQFRRLTGVSPLAYR 356 >UniRef50_B0MSM8 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MSM8_9BACT Length = 258 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 45/62 (72%) Query: 215 GKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 GKTP + + E+RI A + L+ ++ + + IA+E+G++S +LF++ F+++T TP YR++ Sbjct: 188 GKTPFEYLAEMRIGHAVRLLKHSDLTCSQIAYESGFNSYALFVRQFRRITGMTPDRYRRE 247 Query: 275 LT 276 ++ Sbjct: 248 IS 249 >UniRef50_C3HF38 Putative uncharacterized protein n=1 Tax=Bacillus thuringiensis serovar pulsiensis BGSC 4CC1 RepID=C3HF38_BACTU Length = 312 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 3/89 (3%) Query: 192 LENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 L M +S S + +A+ G + Q I R+ +A + L TN S+T+I+ + GY Sbjct: 225 LAEMANMSESSMQSYFKAS---LGMSVYQYIQRKRVEYAAELLIHTNESITEISMQVGYD 281 Query: 252 SPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 +PS F K FK++ TP YRKK TE+NQ Sbjct: 282 NPSKFAKIFKRIYGETPLHYRKKYTEYNQ 310 >UniRef50_UPI0001C368B4 two-component response regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C368B4 Length = 289 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 30/74 (40%), Positives = 44/74 (59%) Query: 202 SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFK 261 S + R+ ++Y G P+Q + IRIN AK+ LE T+ V++I GY +P F + FK Sbjct: 209 STCWFIRSFKQYVGVPPLQYLTSIRINKAKELLESTDCPVSEIGSIIGYENPLYFSRIFK 268 Query: 262 KLTSFTPKSYRKKL 275 K T +P +YRK L Sbjct: 269 KQTGLSPAAYRKVL 282 >UniRef50_A7VU88 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VU88_9CLOT Length = 308 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 67/270 (24%), Positives = 107/270 (39%), Gaps = 53/270 (19%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH------------------- 80 H HD +E + G + +G V L GD +FI G H Sbjct: 44 HWHDEFELGYISGGSVVYQTSGLTVTLHEGDGIFINSGVLHYLHPLEPCREARLQTQFFD 103 Query: 81 QSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRE 140 +SF +L++ +Q L +P +YR++ ++E + + L Sbjct: 104 KSFLAGSLGSLLDIKYVAPVLDQRQLEAVP-------LYRSDPESKGFLECLQKGVELCS 156 Query: 141 TGLEEFVEMVTFYVINRLRHYREEQVIDDVPQW----------LKSTVEKMHDKE----- 185 EEF E+ RLR+ E + + + +W L+ ++E K+ Sbjct: 157 RK-EEFFEL-------RLRNLFSE-LWESIYRWAAQKESSTPSLRRSIEDDRIKQMMRYV 207 Query: 186 --QFSESALENMVALSAK-SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 FSE + +A S S+ R Q G TP++ + +R+ A+ L TN S+ Sbjct: 208 QAHFSEKISVSSIAASIPISERECYRLFQNSMGITPIEYLISVRLQNAQSLLMNTNKSIL 267 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 DIA E G+ S S F K F+ TP YR Sbjct: 268 DIALETGFGSSSYFGKIFRSHHRLTPAQYR 297 >UniRef50_B0A8H8 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A8H8_9CLOT Length = 289 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 33/86 (38%), Positives = 48/86 (55%) Query: 189 ESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEA 248 E +E M L+ S+ Y A ++ G+TP + +IRI+ AK LE T+YS++DIA + Sbjct: 199 EIKIEEMAQLAGLSKNYFGSAFKKALGETPHSYLIKIRISKAKVLLETTDYSLSDIAQKI 258 Query: 249 GYSSPSLFIKTFKKLTSFTPKSYRKK 274 G+ S F FK T P YR+K Sbjct: 259 GFKKASSFTSQFKASTGIIPSKYREK 284 >UniRef50_C0CH60 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CH60_9FIRM Length = 278 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 51/87 (58%) Query: 191 ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGY 250 L+ + +L+ ++ Y+ + +Y G +P+Q +N R+ A L T++SV+DIA G+ Sbjct: 189 TLDTLTSLTHMNKYYMAHSFAKYAGLSPIQYLNRRRLKIACTLLRDTDHSVSDIASSTGF 248 Query: 251 SSPSLFIKTFKKLTSFTPKSYRKKLTE 277 SS S F ++F+K TP YR++ E Sbjct: 249 SSQSYFTQSFRKYYGMTPLQYRQQNAE 275 >UniRef50_C6D3K3 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3K3_PAESJ Length = 296 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 6/99 (6%) Query: 180 KMHDKEQFSESALENMVALS------AKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQ 233 K+ + + ++ ENM++L + S+ +L R R G +P +N++RI A + Sbjct: 184 KVKEAVSYIDAHYENMISLDQLADQLSLSKYHLLRLFTRTVGMSPNDYLNQVRIKEAIRL 243 Query: 234 LEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 L+ +++SV IA + GYS S FIK F+K+T TP S+R Sbjct: 244 LKESDWSVERIAEQVGYSGGSYFIKWFRKITGETPGSFR 282 >UniRef50_Q11HY1 Transcriptional regulator, AraC family with amidase-like domain n=4 Tax=Proteobacteria RepID=Q11HY1_MESSB Length = 361 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 46/83 (55%) Query: 192 LENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 +E M+ S ++ R G +P+ + +RI AK++LE T SV +I+++ GY Sbjct: 252 IEEMIRRSGLTERTFKRRFTSAAGLSPITYVQRLRIEDAKRRLERTEVSVDEISWQVGYE 311 Query: 252 SPSLFIKTFKKLTSFTPKSYRKK 274 P+ F + FK+ T P +YR++ Sbjct: 312 EPAFFRRLFKRFTGLAPGAYRRR 334 >UniRef50_UPI000174610C response regulator receiver domain protein (CheY-like) n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI000174610C Length = 280 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 46/86 (53%) Query: 189 ESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEA 248 E LE++ S E+L R QR G++PMQ + +R+ A++ LE T+ V +A E Sbjct: 195 EWTLESLARAYHSSGEHLRRVCQRELGRSPMQHLTYMRMQRARQLLETTSDKVEVVAGEV 254 Query: 249 GYSSPSLFIKTFKKLTSFTPKSYRKK 274 GY +F + FK+ P YR++ Sbjct: 255 GYRDGLVFSRAFKRWVGCAPSEYRRR 280 >UniRef50_UPI0001C365A9 transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C365A9 Length = 116 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 30/68 (44%), Positives = 41/68 (60%) Query: 205 YLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLT 264 YL R +++ KTP + IN+IRI AK LE TN S+ I E G+ + S F FKK T Sbjct: 41 YLCRVFKKHLNKTPTEFINDIRIANAKLALEYTNRSILQICEEVGFDNTSHFYHLFKKDT 100 Query: 265 SFTPKSYR 272 +PK++R Sbjct: 101 GLSPKAFR 108 >UniRef50_A7LYG4 Sensor protein n=7 Tax=Bacteroides RepID=A7LYG4_BACOV Length = 1317 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 61/115 (53%), Gaps = 7/115 (6%) Query: 160 HYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPM 219 H +E++I +V ++K+ + D E S S++ V +S + L R + KTP Sbjct: 1210 HPEDEELIQNVTDFIKNNI----DDELLSPSSIAEFVGVSKAT---LYRKFKEIIDKTPS 1262 Query: 220 QIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 + + IR+ +A K L T +V++I F+ G+S+ S F + F K +PK YR + Sbjct: 1263 EFVRGIRLEYAAKLLRTTKLTVSEIMFKCGFSNKSYFYREFLKQYGVSPKDYRNQ 1317 >UniRef50_B9QTE2 DJ-1/PfpI family n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QTE2_9RHOB Length = 341 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 47/84 (55%) Query: 191 ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGY 250 +LE + +++ R + G P + + +RI+ A++ LE+T +V I ++ GY Sbjct: 239 SLEELSSVANLGSRTFLRRFAKATGLKPTEYVQNVRISKAREHLELTVKTVDQITWDVGY 298 Query: 251 SSPSLFIKTFKKLTSFTPKSYRKK 274 S P+ F K F +LT TP SYR++ Sbjct: 299 SDPAAFRKVFHRLTGLTPNSYRQR 322 >UniRef50_B2TM72 AraC-family transcriptional regulator n=3 Tax=Clostridium botulinum RepID=B2TM72_CLOBB Length = 291 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 59/256 (23%), Positives = 115/256 (44%), Gaps = 20/256 (7%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGS-HHQSFYEFGATRI------- 91 H H+ E LVL+G + +IN + GD + I GS H+ S E ++ Sbjct: 36 HWHNEIELILVLSGEFNLKINTDSYTCKDGDIILINSGSLHYFSTKENESSTWNSIVFNM 95 Query: 92 --LNVGISKRFFEQHYLPLLPYCF----VASQVYRTNNAFLTYVETVISSLNLRETGLEE 145 LN I P++ F + + NN + +I + N + G E Sbjct: 96 DQLNSNILDNCSVNFITPIINNEFKLPVIIHKDSLINNELKCIILNIIDTYNSKYYGFEL 155 Query: 146 FVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM-----HDKEQFS-ESALENMVALS 199 ++ + F + L + + + + +EK+ + +E ++ E + + A+ Sbjct: 156 EIKSLIFKYFSLLFKFNLVKKKTNNTCLNEEKIEKIKIVLEYIQENYNKEIDINRLSAIC 215 Query: 200 AKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKT 259 +Q + R +++ GKT +Q I R+ A + T+ S+T+I+ E G+++ S FI++ Sbjct: 216 HYNQSHFMRFFKKHTGKTCIQFIKNYRLEKAASLISNTDLSITEISLEVGFTNISYFIRS 275 Query: 260 FKKLTSFTPKSYRKKL 275 FK+ + TPK ++ +L Sbjct: 276 FKEKYNTTPKGFKTRL 291 >UniRef50_B7CB27 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CB27_9FIRM Length = 291 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 59/241 (24%), Positives = 109/241 (45%), Gaps = 5/241 (2%) Query: 37 SGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFI-PLGSHHQSFYEFGATRILNVG 95 S LH H Y E V G ++ K ++ D V + PL SH + E + +G Sbjct: 47 STLHTHLYTEIFYVTKGHGLLSLDNKNYPVKEDDLVIVNPLISHTERGIENVNFEYIVMG 106 Query: 96 ISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVE-MVTFYV 154 I + C +A+ Y + L Y++T++ + ++T + + ++ + Sbjct: 107 IEGVTYFSKEEDEEQGCSIAN-YYEYKHEVLFYLKTILFEVKTKDTEYQSLCQNLLEVLL 165 Query: 155 INRLRHYREEQVIDDVPQWLKSTV--EKMHDKEQFSESALENMVALSAKSQEYLTRATQR 212 IN +R + + K V EK D + L+ + L+ ++ ++ A ++ Sbjct: 166 INLMRRANINLKSSPINKANKDCVLIEKYIDAHFKEDITLDTLSELTFLNKYHIVHAFKQ 225 Query: 213 YYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 Y G +P+ + + R+ AK L TN +++IA+ G++S S F + FKK T +P YR Sbjct: 226 YKGISPINYMIQKRLEEAKLLLSTTNLQISEIAYIVGFTSQSYFAQAFKKATLTSPLQYR 285 Query: 273 K 273 K Sbjct: 286 K 286 >UniRef50_B1R1K3 Transcriptional regulator, AraC family n=2 Tax=Clostridium butyricum RepID=B1R1K3_CLOBU Length = 285 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 58/246 (23%), Positives = 113/246 (45%), Gaps = 16/246 (6%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFY-EFGATRILNVGIS 97 LH H+ EF LVL G +IN K + ++RG+ F+ G H+++ + + + + +S Sbjct: 32 LHWHNNLEFVLVLCGEIKGKINNKYIDVKRGEIFFVNSGELHETWANDKNKIKAITILLS 91 Query: 98 KRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINR 157 ++++ + Y F + + ++ +I T E F E+ V+ Sbjct: 92 YELLKKYFPNIDSYYFDFEEKEDSKGK----IKDLIVKCGEIYTNKENFYELNMSIVLME 147 Query: 158 L-----RHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQE------YL 206 L + +E+ + ++ + + + E + ++LS S+E Y Sbjct: 148 LCNILFKECLKEKEVGNIYNIEEKREVNIKRAITYMEENYDLDLSLSDISREIGMAPTYF 207 Query: 207 TRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSF 266 +R ++ G+T +N+IR+ + K+L T S+T+IA G+S+ FI+ FKK + Sbjct: 208 SRFFKKNTGETFYSYLNKIRLYHSYKELINTEASITEIALNNGFSNVKSFIEIFKKAYNN 267 Query: 267 TPKSYR 272 TP YR Sbjct: 268 TPAKYR 273 >UniRef50_C6XVV2 Helix-turn-helix-domain containing protein AraC type n=2 Tax=Pedobacter RepID=C6XVV2_PEDHD Length = 289 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 59/252 (23%), Positives = 120/252 (47%), Gaps = 20/252 (7%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRV-LLERGDFVFI-PLGSHHQSFYEFGATRILNVGI 96 LH H+ YE L+L + + I G + L++ + VF+ P SH +E ++ I+ V I Sbjct: 30 LHYHEEYELNLILNAKNAKRIVGNHIHLIDDLELVFVGPNLSHAWFTHECKSSEIIEVTI 89 Query: 97 S--KRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISS----LNL-RETGLEEFVEM 149 K F ++ L F+ + R+ ET+ + L+L ++ G + +E+ Sbjct: 90 QFHKDFLDETILRRNQLSFIRNLFERSKKGIAFSTETIKAIKPRILDLCQKNGFDSVLEL 149 Query: 150 VTFYVINRLRHYREEQVIDDVP------QWLKSTVEKMHD--KEQFSES-ALENMVALSA 200 ++ +++ L R + D + +EK+ + +S+ L ++ ++ Sbjct: 150 LS--ILHDLSISRNMVTLSDAAFINQHSSYNSRRIEKVFEYLNANYSKQITLADVAKITN 207 Query: 201 KSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTF 260 +R ++ GKT + +NEIR+ A + L T ++++IA+ G+++ S F + F Sbjct: 208 MPDVSFSRFIKKRTGKTFIDSLNEIRLGHASRLLIDTTTTISEIAYSCGFNNISNFNRIF 267 Query: 261 KKLTSFTPKSYR 272 K+ + TPK +R Sbjct: 268 KRKKNTTPKQFR 279 >UniRef50_C7H5Z6 Transcription regulator, AraC family n=2 Tax=Ruminococcaceae RepID=C7H5Z6_9FIRM Length = 319 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/145 (26%), Positives = 75/145 (51%), Gaps = 4/145 (2%) Query: 135 SLNLRETGLEEFVEMVTFYVI--NRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESAL 192 SL+ ET ++ +E++ +++ L EE D + ++ +++ D E +L Sbjct: 165 SLDGCETVCQDLLEVLLIWLVRCTTLSLQVEESPRSDNRECVE--IKRYLDNNYREEISL 222 Query: 193 ENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSS 252 + + ++ ++ YL Q+ YG +P+ +N RI +K L T YS+ I+ G+SS Sbjct: 223 DTLAEVAHINKYYLAHTFQKAYGISPITYLNRRRIEESKYMLGNTGYSLAQISELMGFSS 282 Query: 253 PSLFIKTFKKLTSFTPKSYRKKLTE 277 PS F + F+K TP YR+++ + Sbjct: 283 PSYFSQCFRKAEGLTPNEYRRQVRQ 307 >UniRef50_Q4A0B7 Putative transcriptional regulator n=1 Tax=Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 RepID=Q4A0B7_STAS1 Length = 293 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 64/256 (25%), Positives = 118/256 (46%), Gaps = 29/256 (11%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQ-----SFYEFGATRILN 93 +H H +F VL G+ I+ K ++L GD +FI H+ EF I Sbjct: 41 IHWHSALQFVFVLRGKLTIRISDKNIVLNTGDGIFINSNVVHEIQGLEHISEFYCWNIEI 100 Query: 94 VGISKRFFEQHYLP-------LLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEF 146 IS + E YL ++PY +++ + +++A L +E+V + +E + Sbjct: 101 PNISS-YMEYKYLSYISQQAEMVPYIYLSHKN-LSHHALLACIESVGTIYQKQEAYFQ-- 156 Query: 147 VEMVTFY--VINRLRHYREEQV------IDDVPQWLKSTVEKMHDKEQFSESALENMVAL 198 ++++T++ ++ L Y ++Q D + + S + K H +++ + L + L Sbjct: 157 LDIMTYFYKIVKWLMQYMKQQPTELTYHFDYRVKQMMSYIHK-HFQDKITLGHLSQNIYL 215 Query: 199 SAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYS-VTDIAFEAGYSSPSLFI 257 S R ++Y +TP + + R+ +K L+ S +T+IA G+S+ S FI Sbjct: 216 SEAEA---IRLFKKYVKQTPFEYLLRYRLEQSKSILDKDRLSTITEIAMACGFSTTSYFI 272 Query: 258 KTFKKLTSFTPKSYRK 273 K FK TPK Y+K Sbjct: 273 KVFKARYGMTPKQYQK 288 >UniRef50_C0ZDD0 Probable transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZDD0_BREBN Length = 298 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 42/122 (34%), Positives = 59/122 (48%), Gaps = 9/122 (7%) Query: 158 LRHYREEQVIDD----VPQWLKSTVE--KMHDKEQFSESALENMVALSAKSQEYLTRATQ 211 + YR + ID+ VP + V + H KE S + N LS + YL + Sbjct: 167 MECYRFMKNIDNPSKQVPDRISEAVCFIQAHYKETISLGDIANAAGLS---RYYLINLFR 223 Query: 212 RYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSY 271 Y TP+Q I ++RI A L TN SV DIA GY++ + F K FKKL +P + Sbjct: 224 EYLNTTPLQYITKLRIEKAMDLLTQTNLSVNDIALAIGYANANYFNKVFKKLIGTSPGQF 283 Query: 272 RK 273 R+ Sbjct: 284 RE 285 >UniRef50_Q0C558 Transcriptional regulator, AraC family n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C558_HYPNA Length = 377 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 1/90 (1%) Query: 192 LENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLE-MTNYSVTDIAFEAGY 250 L + A + S+ +++ R+ GK + IN R+ F +++LE T +V DIA EAG+ Sbjct: 288 LTRLSAATGLSKHHVSEVLNRHAGKNFYEFINGYRVEFVRERLEEKTEQTVLDIALEAGF 347 Query: 251 SSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 SS S F FK+ T TP YRK L N+ Sbjct: 348 SSKSTFNAIFKQFTGQTPTQYRKALAPQNR 377 >UniRef50_A6DJ96 Arabinose operon regulatory protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DJ96_9BACT Length = 280 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 3/83 (3%) Query: 194 NMVALSAK---SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGY 250 N+ LSA+ S+ R ++ GK+P+ + IRI A L MT +S+ DI F G+ Sbjct: 187 NLSILSARASLSEAAFCRLFKKEMGKSPISYLEHIRITHACHFLSMTTHSIKDITFMLGF 246 Query: 251 SSPSLFIKTFKKLTSFTPKSYRK 273 SS S F FKK TP YR+ Sbjct: 247 SSKSHFCARFKKFNHMTPLEYRR 269 >UniRef50_Q5WL40 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WL40_BACSK Length = 323 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 65/262 (24%), Positives = 112/262 (42%), Gaps = 35/262 (13%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATR--ILNVGIS 97 H+HDY E V G Q I + V L++G+ V L H + E T I+N I Sbjct: 63 HRHDYIEMNYVYNGSLKQTIGDRAVELQKGELVV--LNQHIEHEIEACGTEDIIINFIIQ 120 Query: 98 KRFFEQHYL--------PLLPYCFVASQVYRTN--NAFLTY---------------VETV 132 FF +Y+ P Y F+ ++ + FL + VE + Sbjct: 121 PSFF--NYIFSFLNVEGPF--YSFLIDSIHGSEPLGQFLYFKCAKEASVQQLLRKMVEEM 176 Query: 133 ISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESAL 192 + + ++ +V M+ + + +Q + QW++ T + EQ+ ++L Sbjct: 177 MEPDAYSQASIKLYVGMLMIELAKKANTLDGKQKLSLHNQWIRQTFAYI--DEQYKHASL 234 Query: 193 ENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSS 252 + + L++ ++ GKT ++ E R++ AK+ L ++ V+ IA E GY + Sbjct: 235 YELAKRLNQPHYLLSKVIKKQTGKTFKALLQERRLDIAKELLVQSDLPVSVIAQEIGYDN 294 Query: 253 PSLFIKTFKKLTSFTPKSYRKK 274 S F + FKK TP YRKK Sbjct: 295 FSYFYQIFKKHFHTTPLVYRKK 316 >UniRef50_A8S939 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S939_9FIRM Length = 291 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 41/144 (28%), Positives = 69/144 (47%), Gaps = 8/144 (5%) Query: 131 TVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSES 190 + + S+ L E + + ++ + QVI + T+ K + KE + Sbjct: 147 STVDSMVTTGLALHEMLALCARSILAQAEATSARQVILQAAE----TLSKNYQKELY--- 199 Query: 191 ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGY 250 L +++A + S+ Y R +RY G TP + RI AK+ L +T++SV++IA E G+ Sbjct: 200 -LADLLAEAHMSKSYFLRLFRRYMGTTPYNYLVNFRITQAKELLVLTDHSVSEIAQEVGF 258 Query: 251 SSPSLFIKTFKKLTSFTPKSYRKK 274 S F F K T +P YRK+ Sbjct: 259 GDASNFSTRFAKATGQSPLQYRKR 282 >UniRef50_A8RL67 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RL67_9CLOT Length = 272 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 58/246 (23%), Positives = 110/246 (44%), Gaps = 10/246 (4%) Query: 34 ESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDF-VFIPLGSHHQSFYEFGATRIL 92 +++S H HDY+E + G F I + + G+F +F P HH E + L Sbjct: 18 DNMSKSHYHDYFELYYLEEGERFHIIQDRLYCIHPGEFLIFSPYVMHHSYGQENVPFKRL 77 Query: 93 NVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETG-----LEEFV 147 V SK E + LL + VY+ + V ++ L L+E E+++ Sbjct: 78 LVYFSKE--EVDSVQLLKVLEKGTGVYKPDQREKQVVHRMLDDL-LKEQDDPQAYHEDYI 134 Query: 148 EMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLT 207 + + + + V + + + +H Q + +++ + +S S YL Sbjct: 135 HTLLNMALLTIARNIQTPVKPEKRNRITDVISYIHQNYQ-EDISIDQLAQMSYVSPYYLC 193 Query: 208 RATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFT 267 R +RY T +Q +N R+ A++ TN ++T+I+ + G+S+ + F + FK + T Sbjct: 194 REFKRYTNSTIIQYVNVTRVMNAQRMFMETNKNITEISRDTGFSNITHFNRVFKSVMGMT 253 Query: 268 PKSYRK 273 P ++RK Sbjct: 254 PSNFRK 259 >UniRef50_C0A382 AraC-type DNA-binding domain-containing protein-like protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A382_9BACT Length = 323 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 33/83 (39%), Positives = 46/83 (55%) Query: 192 LENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 LE + + S+EYL R G T +N RI AK L TN+ V +IA G+S Sbjct: 213 LEQIARGTHLSREYLARIFHETTGDTVFAWLNIQRIEAAKSHLCGTNHPVGEIASLVGFS 272 Query: 252 SPSLFIKTFKKLTSFTPKSYRKK 274 S +LF +TFK++T TP YR++ Sbjct: 273 SSTLFCRTFKRITGQTPMKYRRQ 295 >UniRef50_D1PCF3 Putative two-component system sensor histidine kinase n=1 Tax=Prevotella copri DSM 18205 RepID=D1PCF3_9BACT Length = 959 Score = 58.2 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 3/100 (3%) Query: 174 LKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQ 233 + +EK F+ S L++++ + K L R + G+TP++ I E+R+N A + Sbjct: 860 INEAIEKHMIDSDFNVSMLQDVIGIGGKQ---LYRKMKAITGRTPVEYIREMRMNRAAEL 916 Query: 234 LEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 L +SV+++ + G+S+ S F K F K TP Y K Sbjct: 917 LSQGKFSVSEVMYTVGFSNSSYFSKCFSKEYGMTPTEYMK 956 >UniRef50_A5V4G1 Transcriptional regulator, AraC family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V4G1_SPHWW Length = 306 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 29/103 (28%), Positives = 54/103 (52%) Query: 170 VPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINF 229 +P W V + + + ++E + + + S ++ +A G+TP Q ++ +RI Sbjct: 199 LPAWRMKKVRSLVAERPGLDLSIEELASSTGLSADHFVKAFSTTMGQTPHQWLSSLRIEE 258 Query: 230 AKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 AKK L T+ +T+IA + G+SS + F FK+L P ++R Sbjct: 259 AKKLLRQTDQPLTEIALDLGFSSSAHFSSRFKQLVGMPPSAWR 301 >UniRef50_C0EDI9 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDI9_9CLOT Length = 369 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 57/260 (21%), Positives = 112/260 (43%), Gaps = 24/260 (9%) Query: 40 HQHDYYEFTLVLTGRYFQEIN-GKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISK 98 H HD++E V TG EI+ ++V L++ + + + H+ + I N+ +S+ Sbjct: 112 HFHDFFELIYVHTGSLRNEIDYTEQVQLDKNHVLLLNPNARHRLLCDDPQAVIFNLMLSR 171 Query: 99 RFFEQHYLPL-----LPYCFVASQVYRT-----------NNAFLTYVETVISSLNLRETG 142 F E L L L + F + +Y N A ++ +I R+ Sbjct: 172 SFVEHTLLSLFDEDNLIFYFFLNSIYGGDRIRSFLYLPLNPAVEQRIQCIIKEHCDRQPL 231 Query: 143 LEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHD-----KEQFSESALENMVA 197 ++ + + +E++ DV L + + D + F+ + L + Sbjct: 232 CQQMIAANLLMLFGEFARLHKEEL--DVESELLAQSSDIGDILRYLRLNFATATLASTAR 289 Query: 198 LSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFI 257 S+ Y +R +R GK ++++EIR+ A L+ ++ V I+ GY +P+ F Sbjct: 290 KFNYSESYFSRMIKRQTGKRFTELLSEIRLETACNYLKNSDLPVEKISEIIGYQNPANFF 349 Query: 258 KTFKKLTSFTPKSYRKKLTE 277 + FKK + +PK +R++ E Sbjct: 350 RLFKKHLATSPKDFRRQYRE 369 >UniRef50_C6CFY9 Transcriptional regulator, AraC family n=4 Tax=Dickeya RepID=C6CFY9_DICZE Length = 187 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 1/87 (1%) Query: 191 ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMT-NYSVTDIAFEAG 249 LE++ A+S KS+ + R + Y TPM+ I +R+ AK+ + ++ N+S+TDI + G Sbjct: 60 TLEDLEAVSGKSKFDICRLFNQVYNITPMRWIWRVRLTLAKEIIHISPNWSLTDICYACG 119 Query: 250 YSSPSLFIKTFKKLTSFTPKSYRKKLT 276 +SS F + F K + P YRK ++ Sbjct: 120 FSSLPHFSRCFTKTYNIPPLKYRKSVS 146 >UniRef50_A9WH32 Sensor protein n=2 Tax=Chloroflexus RepID=A9WH32_CHLAA Length = 1202 Score = 58.2 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 26/72 (36%), Positives = 45/72 (62%) Query: 202 SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFK 261 S++YLT ++ G TP++ +N R+ A+ L ++ S+T+IA E G+SS S F + F+ Sbjct: 1124 SEDYLTHCFRQELGTTPVEYLNRYRVLQARHLLAESDKSITNIALEVGFSSSSYFSRVFR 1183 Query: 262 KLTSFTPKSYRK 273 K +P+ YR+ Sbjct: 1184 KEVGQSPEEYRR 1195 >UniRef50_UPI000178A007 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A007 Length = 278 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 26/60 (43%), Positives = 37/60 (61%) Query: 214 YGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 Y TPMQ + E+RI A+K L T + I FE GY S S F ++FK ++ +PK+YR+ Sbjct: 211 YNMTPMQYLTEVRIRVAQKLLVETGKDIISICFEVGYDSVSTFYRSFKAVSKLSPKTYRE 270 >UniRef50_UPI00017450D3 transcriptional regulator, AraC family protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017450D3 Length = 285 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 3/109 (2%) Query: 165 QVIDDVPQWLKSTVEKMHDKEQFSES-ALENMVALSAKSQEYLTRATQRYYGKTPMQIIN 223 Q + VP L+ + +M ++ ++++ L ++ L+ S + R +R G +P+ + Sbjct: 168 QDTEPVPSTLERPLIRM--RQHYADALRLSDLAHLAGMSVSHFIRTFKRTMGTSPIDWLR 225 Query: 224 EIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 R+N AK +L T+ + +IA + GY P F K FKKLT P YR Sbjct: 226 RERMNQAKHRLIDTDEPIKEIARQCGYRDPYFFSKDFKKLTGLPPTDYR 274 >UniRef50_C0EGG6 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGG6_9CLOT Length = 334 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 58/263 (22%), Positives = 112/263 (42%), Gaps = 22/263 (8%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKR 99 H HD++E V G Q K + D + + + H + + N+ ISK Sbjct: 68 HCHDFFEMIYVYRGNCLQRFPDKEFTMREHDLLLLNPYTIHAPYTIKNEDSVFNILISKT 127 Query: 100 FFEQHYLPLLPYC-----FVASQVYRT-------------NNAFLTYVETVISSLNLRET 141 FE+ L L+ F+ + +Y++ N L VE++I +E Sbjct: 128 LFERSLLSLISDNRIFSEFIINCLYQSSKSNDYLYFPANENEPVLDLVESIIIEYLEKEL 187 Query: 142 GLEEFVE---MVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM-HDKEQFSESALENMVA 197 ++ +E ++ F ++R+ H R + + + ++ V + + E +LE++ Sbjct: 188 SYQKVMEASLVLLFAKLSRIYHKRFSSEVLENQKNTQTIVSILAYINENAPNVSLESISE 247 Query: 198 LSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFI 257 S +L+R ++ GK QI+ + +I A+ LE + ++ +I +G+ S + F Sbjct: 248 RFNYSTGHLSRMIHQFTGKPYSQIVQKFKIERARSYLENSELTIPEIMELSGFHSANYFY 307 Query: 258 KTFKKLTSFTPKSYRKKLTEFNQ 280 + FKK TP YR N+ Sbjct: 308 RMFKKFYLMTPNEYRSNYAAANK 330 >UniRef50_A1KC76 Putative AraC family transcriptional regulator n=1 Tax=Azoarcus sp. BH72 RepID=A1KC76_AZOSB Length = 345 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 20/148 (13%) Query: 139 RETGLEEFVEMVTFYVIN----------RLRHYR--EEQVIDDVPQWLKSTVEKMHDKEQ 186 R G++E + + +I+ RL R E+ +I D W+ ++ Sbjct: 192 RLAGVDEAMHVARLNLIDWHHSGQQPFARLARSRQAEDALIADCQAWIADNYQR------ 245 Query: 187 FSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAF 246 + + MVA S + R Q G +PM+ ++ +R+ AK+ LE + +V +A Sbjct: 246 --PTPVAAMVARSGLPERSFKRRFQLATGMSPMEYVHTLRLEEAKQMLEASTLAVEAVAL 303 Query: 247 EAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 E GY S F + F++ TP +YR++ Sbjct: 304 ELGYEDASFFNRLFRREVGLTPAAYRRR 331 >UniRef50_C6D0B3 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D0B3_PAESJ Length = 300 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 66/280 (23%), Positives = 113/280 (40%), Gaps = 53/280 (18%) Query: 39 LHQ----HDY-----YEFTL--VLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG 87 LHQ H+Y Y+F L VL GR + G L G+ +FI G H + G Sbjct: 28 LHQTIRNHEYPLRRIYDFELLYVLDGRITAHLGGTDYSLSTGEMLFISAGVPHNLNIDSG 87 Query: 88 ATRILNVGISKRFFEQHYL---------------------PLLPYC--FVASQVYRTNNA 124 + L +GI FF++ + LL C F + V+ + Sbjct: 88 --QALFLGIHFDFFDEFDIVIDQDIIVKDDTVVVEDFCSEALLSGCRPFSDNPVWTPSAE 145 Query: 125 FLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREE---------QVIDDVPQWLK 175 + +ETVI L + G E + + ++ L+ R E + + V +W++ Sbjct: 146 LVKEMETVIKEFTLTKPGFEAVCKGLMISILINLQRSRTEAGPHLTTRRERMTPVVEWIE 205 Query: 176 STVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLE 235 H E S L ++ + ++YL + + YG + + + IR AK+ L Sbjct: 206 Q-----HYMEDCSNETLAKLLNIH---EDYLGKQFKSVYGMSLNKYVQSIRHREAKRLLR 257 Query: 236 MTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 ++ +V ++ E GY F + F K +P+ YRK + Sbjct: 258 ESDATVEQVSREVGYEDMHYFSRIFNKWEGLSPREYRKTV 297 >UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJ70_CALS8 Length = 286 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 60/258 (23%), Positives = 115/258 (44%), Gaps = 32/258 (12%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYE---------FGATR 90 H HD +E + G ++GK L F+F+ GS H E F + Sbjct: 37 HWHDEFEIVYLEKGTASFRVDGKEYFLGPKQFLFVNCGSIHGGKAEDNPEPYAIVFSLSM 96 Query: 91 ILNVG--ISKRFFEQHYLPLLPYCFVASQVYRTNNAF-----LTYVETVISSLNLRETGL 143 + + G I K + Q V+ + N+F + +I+ + G Sbjct: 97 LFSEGPDICKSKYLQS---------VSERKLLVQNSFEDEHTRELISNIITVWKEKPKGY 147 Query: 144 EEFVE----MVTFYVINR--LRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVA 197 E V+ ++ +Y+ N+ + ++ +D + +KS ++ ++ S+ ++ + Sbjct: 148 ELLVKGYLFVIFYYLFNKRYVTASSTDRELDLKLEKIKSALDFINSNYS-SDIDIDLLAK 206 Query: 198 LSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFI 257 L+ S+ Y R + TP+ IN+ R+ A + ++ TN S+++IAFE G+++ S FI Sbjct: 207 LANLSKFYFCRLFKEITHLTPVDYINKFRVEKAIELIKNTNLSISEIAFEVGFNNVSYFI 266 Query: 258 KTFKKLTSFTPKSYRKKL 275 K FK+ TP Y+K + Sbjct: 267 KVFKEYVGVTPFKYKKNV 284 >UniRef50_B8DF67 Methylphosphotriester-DNA alkyltransferase n=19 Tax=Listeria RepID=B8DF67_LISMH Length = 186 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%) Query: 172 QWLKSTVEKMHDKEQFSESALENMVALSAKSQEY-LTRATQRYYGKTPMQIINEIRINFA 230 +W+ T +M+ KE F++ ++A Y L R +R TP+ + IRIN+A Sbjct: 81 EWV--TNIEMYIKENFAKPLTLQIIADDCHGSPYHLHRTFKRITMITPITYLENIRINYA 138 Query: 231 KKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 KKQL +N S+ I +G+ +PS F TFK+ T +P +RK + Sbjct: 139 KKQLTSSNQSIEIIGKMSGFPNPSHFSTTFKRHTGLSPNQFRKTI 183 >UniRef50_C2GWE4 AraC/XylS family transcriptional regulator n=4 Tax=Bifidobacterium longum RepID=C2GWE4_BIFLO Length = 321 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 30/72 (41%), Positives = 40/72 (55%) Query: 202 SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFK 261 S YLT +R +G + I E RI+ A++ L T SV DIA E GY+ P F++ FK Sbjct: 240 SPSYLTAMYRRVFGVGVAEQIIEYRIDRARELLSSTASSVADIAREVGYADPKYFMRVFK 299 Query: 262 KLTSFTPKSYRK 273 + T TP YR Sbjct: 300 RRTGLTPGQYRD 311 >UniRef50_B8FFF2 Transcriptional regulator, AraC family n=2 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FFF2_DESAA Length = 333 Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 1/96 (1%) Query: 184 KEQF-SESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 +E+F S ++E + S + R ++ G +P+ + +RI AK QLE T S+ Sbjct: 231 EEKFPSRISVEALACDMGVSPRHFVRRFKQATGDSPLIYLQRVRIEAAKHQLEKTAQSIE 290 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEF 278 +I + GY P+ F K FKK T +P+ YR + T Sbjct: 291 EITQQVGYEDPNSFRKLFKKTTGLSPREYRNRFTRL 326 >UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dictyoglomus RepID=B5YFJ6_DICT6 Length = 287 Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 59/264 (22%), Positives = 115/264 (43%), Gaps = 22/264 (8%) Query: 27 VFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEF 86 +F+Y + H H+ +E + G ++G L G+++F+ GS H Sbjct: 28 IFVYRN--GVVNPHWHNEFEILYMERGIGKFYVDGYEYKLNEGEYLFVNSGSIHSGLEMI 85 Query: 87 GATRILNVGISKRFF---------EQHYLPLLPYCF-VASQVYRTNNAFLTYVETVISSL 136 + + R +++LPL+ + + S + + + +I Sbjct: 86 KRSIGYAIVFDLRLLYSEEPDYCKHEYFLPLINKRYHIPSNL--NDEHIRNDICRIIEVF 143 Query: 137 NLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMV 196 + G E +++ + F + R+ Y E+ D L +E++ D + + Sbjct: 144 KEKSYGYELYIKSLLFDIFWRVFKYYAERRNQD--GRLGYKIERIKDVLNYINQNYNKNL 201 Query: 197 ALSAKSQE------YLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGY 250 +L S++ YL R + +P++ IN++R++ A + L T+ SV++IAFE G+ Sbjct: 202 SLDELSRQVDMSKFYLCRLFKESLRMSPVEYINKVRVDKAMELLINTDMSVSEIAFECGF 261 Query: 251 SSPSLFIKTFKKLTSFTPKSYRKK 274 + S FIK FKK TP +RK+ Sbjct: 262 DNISYFIKVFKKYMHTTPLKFRKQ 285 >UniRef50_A1S8K4 Transcriptional regulator, AraC family with amidase-like domain n=1 Tax=Shewanella amazonensis SB2B RepID=A1S8K4_SHEAM Length = 336 Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 60/112 (53%), Gaps = 8/112 (7%) Query: 163 EEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQII 222 E++ I QWLK H +Q S + + +++ A++ R + G TP++ + Sbjct: 225 EDEAIRKAEQWLKH-----HFDQQISVDSAADAISMGARN---FKRRFKAATGVTPIEYL 276 Query: 223 NEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 +R++ AK+QLE ++ + T++ + GY S F + FK+ T T + YR++ Sbjct: 277 QRLRVDAAKRQLEHSSRASTEVIWSVGYEDASSFRRLFKRQTGVTMEQYRRR 328 >UniRef50_C3JXK6 AraC-family transcriptional regulator n=3 Tax=Gammaproteobacteria RepID=C3JXK6_PSEFS Length = 297 Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 2/93 (2%) Query: 184 KEQFSES-ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 +E +E+ LE++ + S YL RA ++YYG TP + RI FA+ QL + Sbjct: 188 REHCTEALKLEDICLAAELSPSYLIRAFKQYYGLTPHAFLVNRRIQFARAQLRQGEL-IA 246 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 D+A AG++ + F +TFK+ + TP YR+ L Sbjct: 247 DVALAAGFADQAHFQRTFKQHFAATPGQYRELL 279 >UniRef50_C7IE87 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IE87_9CLOT Length = 329 Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 43/82 (52%) Query: 191 ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGY 250 +L NM +L S Y ++ +R G IN IRI A++ LE T+ +T+IA + G+ Sbjct: 244 SLNNMASLCNISTSYFSKLFRRTIGDNFSNHINRIRIKKARELLETTDIPITNIALDLGF 303 Query: 251 SSPSLFIKTFKKLTSFTPKSYR 272 FIK FKK TP +R Sbjct: 304 EDSGYFIKVFKKFEGVTPSKFR 325 >UniRef50_C6D1M1 Transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6D1M1_PAESJ Length = 549 Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 28/82 (34%), Positives = 47/82 (57%) Query: 192 LENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 +E + +L+ + TR + G+ P+Q +NE+RIN AKK L T+ + DIA AG++ Sbjct: 202 VEELASLAGIDRWKYTRLFKEATGQVPLQYLNEVRINEAKKWLVSTDDKLLDIALNAGFN 261 Query: 252 SPSLFIKTFKKLTSFTPKSYRK 273 + F + FK+ +P YR+ Sbjct: 262 NEYYFNRRFKQTVGISPGQYRR 283 >UniRef50_A6M0N1 Response regulator receiver protein n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M0N1_CLOB8 Length = 336 Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 39/133 (29%), Positives = 71/133 (53%), Gaps = 11/133 (8%) Query: 146 FVEMVTFYVINRL---RHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKS 202 F+E F V+N + ++ +++DV ++++ +E+ E L ++ + S Sbjct: 212 FLEFWLFKVMNYVFQQNSIKKYSILNDVFSYIENNIEE--------EIGLNEIINNCSVS 263 Query: 203 QEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKK 262 Q YL+R +R + + M+ ++ +IN AK T+ S+TD+AF+ GY+ S F K FKK Sbjct: 264 QGYLSRIFKRQFNISVMEYLHMRKINMAKSYFCFTDLSITDVAFKLGYNESSYFSKVFKK 323 Query: 263 LTSFTPKSYRKKL 275 + T Y+K L Sbjct: 324 YENTTVYKYKKML 336 >UniRef50_A3W1D7 Transcriptional regulator, AraC family protein n=3 Tax=Rhodobacteraceae RepID=A3W1D7_9RHOB Length = 342 Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 49/83 (59%) Query: 191 ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGY 250 +++++ + S+ + R +Y KTP + ++R++ + L T+ SVT+IA +G+ Sbjct: 258 SMDDLADAAGCSRRQMERLFVKYLRKTPYRFFRDLRLDHGRSLLRETDLSVTEIAMASGF 317 Query: 251 SSPSLFIKTFKKLTSFTPKSYRK 273 +SP +FIKTF+ +P YR+ Sbjct: 318 ASPMVFIKTFRSRFGHSPGQYRR 340 >UniRef50_D1N597 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N597_9BACT Length = 279 Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 64/259 (24%), Positives = 106/259 (40%), Gaps = 17/259 (6%) Query: 27 VFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEF 86 V+ K +I GLH+HD +E + G IN + RGD V+I L H YE Sbjct: 18 VWPVQKAGAI-GLHRHDCFELVFITRGTGLCRINDLSYPVLRGD-VYI-LNPHDTHCYEM 74 Query: 87 GATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAF--LTYVET---------VISS 135 ++ + +R QH L P + RT+ L ET +I Sbjct: 75 ASSCTFYNILFRRELLQHEPALTP--LLDDWESRTDRKLYQLENDETDAEEFRFQEIIVE 132 Query: 136 LNLRETGLEEFVE-MVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALEN 194 L R G E V + +++ LR E+ I + S V + + S +L Sbjct: 133 LKKRLPGYEAAVRALFAVFLVRLLRRGNCERHIPPGHRPSASKVFEYINAHLGSTISLRE 192 Query: 195 MVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPS 254 + ++ S A +++ G + I +RI A++ LE ++ +IA G+ Sbjct: 193 LAGVAGMSTPAFAGAFRQWTGNSVPGHIGALRIRQARRLLEERKLTIGEIALRLGFYDTC 252 Query: 255 LFIKTFKKLTSFTPKSYRK 273 F + F+K T +P+ YR+ Sbjct: 253 HFSRVFRKKTGLSPREYRQ 271 >UniRef50_A2TYF7 Regulatory helix-turn-helix protein, AraC family n=1 Tax=Polaribacter sp. MED152 RepID=A2TYF7_9FLAO Length = 290 Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 73/289 (25%), Positives = 127/289 (43%), Gaps = 43/289 (14%) Query: 9 PEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLER 68 P TAR Q+LF + E+++ H +YY L+ G+ I+ + Sbjct: 17 PNFCTARLQELFK--------HPPLETMTTFHSLNYYTLLLITEGKGKHNIDYTDYEYSK 68 Query: 69 GDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTY 128 G + I H+ FY+ A L FF++ +L +Q + N LT Sbjct: 69 GTLLAIRRNQVHR-FYKSDAKGYL------IFFKEDFLNRYLNDAEVAQSIQAFNELLTS 121 Query: 129 VETVISSLNLRET-GLEEFVEMVTFYV-------INRL--------------RHYREEQV 166 +T I + L E L + +EM ++ INR R + + ++ Sbjct: 122 PKTQIENQELVEVIKLAQGLEMEATFISDEYSNRINRSLLHVLLSLVHRIKSRGFNKVEL 181 Query: 167 IDDVPQWLK--STVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINE 224 +++ +++K + VEK + K + E +M+ S+K L K I+E Sbjct: 182 NNNLQEFIKFQNLVEKNYHKTKKVED-YADMMGFSSKK---LNSIVNFISNKPVKAFIDE 237 Query: 225 IRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 + I AKK + TN S ++AF+ G++ P+ F K FKK TS+TP++++K Sbjct: 238 VVIIKAKKNILHTNMSAKEVAFKLGFNDPANFYKYFKKHTSYTPETFKK 286 >UniRef50_B5JMW9 Transcriptional regulator, AraC family protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JMW9_9BACT Length = 224 Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 29/81 (35%), Positives = 46/81 (56%) Query: 192 LENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 +E++ + S +L + YG TP Q+I E R++ A++QL T YS+ +IA G++ Sbjct: 138 VESLAKEAGWSVAHLHDQFKTAYGSTPRQMILERRLSSAREQLVGTGYSIKEIAANTGFT 197 Query: 252 SPSLFIKTFKKLTSFTPKSYR 272 S F F+K TPK+YR Sbjct: 198 HSSAFCSAFRKAFGVTPKAYR 218 >UniRef50_UPI0000DAF41A hypothetical protein PaerPA_01003251 n=1 Tax=Pseudomonas aeruginosa PACS2 RepID=UPI0000DAF41A Length = 306 Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 61/117 (52%), Gaps = 9/117 (7%) Query: 159 RHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTP 218 R++R+E ++ L+ +E H + LE M A + + L R G +P Sbjct: 194 RNHRDESILA-----LQDWIEANHAEPL----GLERMAAQAGLALRTLKRRFGAATGLSP 244 Query: 219 MQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 ++ + ++R++ AKK L T S+ +IA+E GY + S F++ F+K TP +R ++ Sbjct: 245 IRYLQQVRVDRAKKLLLATPLSIREIAYEVGYENVSFFVRLFRKEAGDTPSHWRGRV 301 >UniRef50_A6TKQ3 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TKQ3_ALKMQ Length = 282 Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 32/76 (42%), Positives = 48/76 (63%) Query: 202 SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFK 261 SQ YL+R ++ G T ++ IN IRI A++ L TN+ V DI+ G+ S S F + FK Sbjct: 207 SQYYLSRTFKQATGFTFVEYINNIRIREAQRLLRETNHKVIDISEAVGFGSISHFGRVFK 266 Query: 262 KLTSFTPKSYRKKLTE 277 ++T F+P +YR+ TE Sbjct: 267 EVTRFSPLNYRRLNTE 282 >UniRef50_UPI0001C35507 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35507 Length = 307 Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 67/265 (25%), Positives = 116/265 (43%), Gaps = 35/265 (13%) Query: 38 GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATR---ILNV 94 LHQH+ E + + Y N LE G+ +FIP + H+ R + N+ Sbjct: 44 ALHQHNAIEILVPIENSYTVLANNHTYQLEPGNILFIPGLTLHEIMKPDWGERFIFMFNM 103 Query: 95 GISKRFFEQHYLP--LLPYCFVASQ----VYRTNNAFLTYVETVI--SSLNLRETGL-EE 145 F + L LL CF+ + +Y + L + T+ SS+ RE + Sbjct: 104 DPLTSFHDYSSLEPVLLDPCFLTKRTTPGIYEHIYSRLMEISTLYFSSSITFREYSIYAN 163 Query: 146 FVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHD------------KEQFSES-AL 192 ++++T I R + D + ++T EK +D + F+E L Sbjct: 164 LIDILT--TIGR-------EYYDALFAGTENTAEKSYDYYQKFNSLLSYINDHFAEPLTL 214 Query: 193 ENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSS 252 E M + S+ + TR +++ T ++ RI A + L T+ S+T IAF+ G+++ Sbjct: 215 EKMADYTGFSKYHFTRLFKQHTNSTFYDYLSRKRIQ-AAQTLLTTDASITSIAFQTGFNN 273 Query: 253 PSLFIKTFKKLTSFTPKSYRKKLTE 277 + F + FKK T+++P YR K E Sbjct: 274 STSFTRCFKKYTNYSPSEYRTKFIE 298 >UniRef50_Q2SHV1 AraC-type DNA-binding domain-containing protein n=2 Tax=Proteobacteria RepID=Q2SHV1_HAHCH Length = 370 Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 26/71 (36%), Positives = 44/71 (61%) Query: 206 LTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTS 265 ++ A R YG+ Q++NE RI AK+ L+ T+ VT + FEAG+ + S F + F+++ Sbjct: 297 ISGAINRVYGRNVSQVVNEYRIEEAKRLLQETDLPVTSLLFEAGFQTKSNFNREFQRVAG 356 Query: 266 FTPKSYRKKLT 276 TP YR+ ++ Sbjct: 357 MTPSDYRRSVS 367 >UniRef50_A8SGH8 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A8SGH8_9FIRM Length = 288 Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 47/84 (55%) Query: 191 ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGY 250 +L+ + L+ ++ YL QR YG +P+ +N RI +K L T YS+ I+ G+ Sbjct: 190 SLDLLAELAHLNKYYLAHTFQREYGISPITYLNRRRIEESKHMLGNTGYSLAQISELMGF 249 Query: 251 SSPSLFIKTFKKLTSFTPKSYRKK 274 SSPS F + F+K TP YR++ Sbjct: 250 SSPSYFSQCFRKAEGMTPNEYRRQ 273 >UniRef50_UPI0001787E19 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787E19 Length = 533 Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 32/107 (29%), Positives = 59/107 (55%), Gaps = 1/107 (0%) Query: 174 LKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQ 233 +K TVE +H + + E++ + S +Y TR +R GK+PM ++ +R+N AK++ Sbjct: 161 VKQTVEYIH-RHYHRNISREHLAERAGLSSDYFTRIFKRQLGKSPMSYLSAVRLNHAKQE 219 Query: 234 LEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 L +T S IA GY+ F + F+ +T +P Y K++ + ++ Sbjct: 220 LLLTKDSFRTIAQRIGYADEFYFSRKFRMMTGMSPSMYVKQMKKADK 266 >UniRef50_C5D8H7 Two component transcriptional regulator, AraC family n=3 Tax=Geobacillus RepID=C5D8H7_GEOSW Length = 515 Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 10/139 (7%) Query: 137 NLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMV 196 L+ T E+ MV + I RH + I ++ D+ LE + Sbjct: 383 ELKRTATEQLQHMVHY--IQAWRHQQANGKIGKAKDYI--------DEHYHHPLTLEEVA 432 Query: 197 ALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLF 256 S Y ++ + +G T + + E+RI AKK++ N S+ +I F GY+ P+ F Sbjct: 433 EYVGISPYYFSKLFKDRFGMTFIDYVTEVRIARAKKEMADPNKSLKEICFLVGYNDPNYF 492 Query: 257 IKTFKKLTSFTPKSYRKKL 275 + FKK T +P YRKKL Sbjct: 493 SRVFKKHTGMSPTEYRKKL 511 >UniRef50_B5KB88 Transcriptional regulator, AraC family n=1 Tax=Octadecabacter antarcticus 238 RepID=B5KB88_9RHOB Length = 438 Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 44/89 (49%) Query: 192 LENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 +E MVA S + +R + G P++ + +RI AK+ LE SV DI GY Sbjct: 342 VEQMVARSGLNPRTFSRRFRSVTGFAPIEYVQALRIEEAKQMLETDAQSVDDIGSSVGYE 401 Query: 252 SPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 P+ F + FK+ +P +YRKK Q Sbjct: 402 DPASFRRVFKRGVGLSPAAYRKKFQRIAQ 430 >UniRef50_C4Z408 Two-component system, response regulator YesN n=15 Tax=Clostridiales RepID=C4Z408_EUBE2 Length = 266 Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 56/244 (22%), Positives = 106/244 (43%), Gaps = 22/244 (9%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFI-PLGSHHQSFYEFGATRILNVGISK 98 H H+ E V G + + +E+GD F+ P HH + G + + + IS Sbjct: 25 HLHNALEIVCVTNGTLELGVGQELYHMEKGDIGFVFPDIIHHYQIFSPGVNKAVYI-ISP 83 Query: 99 RFFEQHYL----------PLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVE 148 F Y P++ V +VYR NA L I+ + + +++ Sbjct: 84 PFAIGKYAEIIQTMAPDYPIIKAEMVEPEVYRAINAILDTDHMDIAVI-------QAYLQ 136 Query: 149 MVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTR 208 +V I +L+ + V + + + ++ FS L++M S+ L+R Sbjct: 137 IVIARCIGKLKLVEKGDVGSKDLVYQAVSYVSGNFRKNFS---LDDMARDLGVSKYVLSR 193 Query: 209 ATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTP 268 + + + Q +N+ R+N+A +LE T+ ++T+I +++G+ S F + FK+ TP Sbjct: 194 TFSKTFHRNFNQYLNDTRLNYACYRLENTSDAITNICYDSGFESQRTFNRVFKERYKVTP 253 Query: 269 KSYR 272 YR Sbjct: 254 SEYR 257 >UniRef50_A3DIQ4 Transcriptional regulator, AraC family n=3 Tax=Clostridium thermocellum RepID=A3DIQ4_CLOTH Length = 204 Score = 57.0 bits (136), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 49/196 (25%), Positives = 92/196 (46%), Gaps = 12/196 (6%) Query: 86 FGATRIL--NVGISKRFFE---QHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRE 140 FG I +VGI K++FE + Y+P P + ++ + Y++ I+ R Sbjct: 4 FGKVGIFISSVGIDKKYFENIYRKYIPGNPDFKNDWIQFVISHEVMVYIKKFITEYQERI 63 Query: 141 TG----LEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSES-ALENM 195 G LE E++ +I + + E+ + +++ +E MH + F + +E + Sbjct: 64 IGYKDILEALSEIICHSLIRGIVGVKTEKNLISDNFEIENIIEYMH--QHFGQKITVEEL 121 Query: 196 VALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSL 255 + S+ + R ++ G +PM + IRI AKK L ++++I+F G++S S Sbjct: 122 AKKTNMSKSHFIRVFKKITGLSPMDYLINIRIEKAKKLLGAGTKNISEISFLCGFNSLSH 181 Query: 256 FIKTFKKLTSFTPKSY 271 F TF K+ +P Y Sbjct: 182 FSSTFSKIVGVSPSKY 197 >UniRef50_C9AAA4 Transcriptional regulator n=3 Tax=Enterococcus casseliflavus RepID=C9AAA4_ENTCA Length = 277 Score = 57.0 bits (136), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 62/253 (24%), Positives = 111/253 (43%), Gaps = 37/253 (14%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKR 99 H H+YY L+ G ++E GD + IP + H+ + +++ I Sbjct: 30 HWHEYYVIGLMEAGTRQFTCQNTCYIVEAGDLILIPPKAAHRC-QQLTEEKLVYRNI--- 85 Query: 100 FFEQHYLPLLPYCFVASQVYRTNNAFLT--YVETVISSLNLRETGLEEFVEMVTFYVINR 157 H P +A QV + N LT + E VI + RE EF + + +R Sbjct: 86 ----HLTPE----NMAVQVQKIFNTQLTPHFPEPVIRQVKERE----EFHAVHQLLLSDR 133 Query: 158 LRHYREEQ----VIDDV-------------PQWLKSTVEKMHDKEQFSES-ALENMVALS 199 + +++ ++ D+ P K+ K + + ++E +L + + Sbjct: 134 GDEFEKQERFTCLLHDLLVQYADFTHEQTDPVSNKAATAKAYIDQHYAEKLSLSELSDVL 193 Query: 200 AKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKT 259 +Q L R + YG +P Q ++ +RI+ AKK+LE ++ ++AF G+S S F + Sbjct: 194 GMNQYVLIRQFTKAYGLSPFQYLSTVRISAAKKRLEAQE-AIAEVAFLTGFSDQSHFTRI 252 Query: 260 FKKLTSFTPKSYR 272 FK L TPK+Y+ Sbjct: 253 FKSLIGVTPKAYQ 265 >UniRef50_C1P8W3 Transcriptional regulator, AraC family n=1 Tax=Bacillus coagulans 36D1 RepID=C1P8W3_BACCO Length = 317 Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 9/118 (7%) Query: 159 RHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTP 218 RH++ +V + +W+++ + + E ++E++ +YLTR +R T Sbjct: 180 RHFKNSRV-SKIKEWIRANLSE--------ELSVEDVARAFQIHPDYLTRLFKRNTHCTT 230 Query: 219 MQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 +Q INE++I AK L TN +V+ IA A + F++ FKK+T TP YR T Sbjct: 231 LQFINELKIETAKMLLLRTNLTVSQIASHAYFIDEKNFMRRFKKMTGLTPTEYRNAYT 288 >UniRef50_B5JHR7 Transcriptional regulator, AraC family protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JHR7_9BACT Length = 316 Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 61/266 (22%), Positives = 113/266 (42%), Gaps = 35/266 (13%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKR 99 H HD+ E L+ G + G + GD VF+ G +Y+ ++N+ Sbjct: 55 HTHDFCELALITRGSAMHWLEGAEFPITAGD-VFVLQGQQSHYYYDLQKLEMINIMFDP- 112 Query: 100 FFEQHYLP-----LLP---YCFVASQVYRTNNAFLTYVETVISSLNLRE----------- 140 EQ LP +P F+ ++R + F +++ S+L E Sbjct: 113 --EQLNLPETRLRKIPGYRALFLLEPLFRKQHRFTSHLHLSRSTLAHSERIAVELDNEVR 170 Query: 141 ---TGLE-----EFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESAL 192 G E +FVE+V + ++RL Y+E + + + V + E + Sbjct: 171 GKMEGYEAAMFAKFVELVVY--LSRL--YQETESTNAEALLRVAKVIGSIEDEFTKPWKV 226 Query: 193 ENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSS 252 E+ A++ S+ R + G+TP+ + ++RI + L T S+++IAFE G++ Sbjct: 227 EDFAAMAHMSRANFMRVFRTATGETPINYLLQLRIQKSMTLLTSTKLSISEIAFEVGFND 286 Query: 253 PSLFIKTFKKLTSFTPKSYRKKLTEF 278 + + + FK +P +YR+ T F Sbjct: 287 SNYYTRQFKASQGISPLAYRRTHTGF 312 >UniRef50_A5N5Q2 Transcriptional regulator n=3 Tax=Firmicutes RepID=A5N5Q2_CLOK5 Length = 274 Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 66/244 (27%), Positives = 109/244 (44%), Gaps = 21/244 (8%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGAT---RILNVG- 95 H H+YY + G+ + + + GD + +H G T R +N+ Sbjct: 31 HFHEYYVIGFIENGQRYLSCKNEEYTIAPGDLLLFNPRDNHTCEQIDGKTLDYRCINIQP 90 Query: 96 --ISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFV--EMVT 151 +SK FE LPY SQV AF + + +++ L+L E+ E + Sbjct: 91 EIMSKVVFEIMNRDYLPY--FTSQV-----AFHSELVSLLKELHLMIMQEEKDFRKEELF 143 Query: 152 FYVINRLRHYREEQVIDDVPQWLKSTVEK----MHDKEQFSESALENMVALSAKSQEYLT 207 F+++++L EQ I P+ +ST K ++ L+++ L+ S+ YL Sbjct: 144 FFLLDQLIEEYTEQDITS-PKVEQSTEAKAICEFLEQNYMKNITLDDLSNLTGLSKYYLL 202 Query: 208 RATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFT 267 R+ + G +P + IRI+ AKK LE + D+AF+ G++ S F FKK T Sbjct: 203 RSFTKQKGISPYSYLETIRIDKAKKFLEQGVLPI-DVAFQTGFTDQSHFSNFFKKFIGLT 261 Query: 268 PKSY 271 PK Y Sbjct: 262 PKQY 265 >UniRef50_C4Z413 AraC family transcriptional regulator, arabinose operon regulatory protein n=18 Tax=Clostridiales RepID=C4Z413_EUBE2 Length = 276 Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 44/82 (53%) Query: 192 LENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 +E S + R +++ G TPMQ I +R+N A+ LE TNYS+ +I+ GY Sbjct: 189 IEEYATSKGMSVSWFIRNFKKFTGSTPMQFIVALRVNNAQVLLEATNYSINEISKIVGYD 248 Query: 252 SPSLFIKTFKKLTSFTPKSYRK 273 + F + F KL +P+ YRK Sbjct: 249 NQLYFSRLFHKLKGDSPRDYRK 270 >UniRef50_D1QW91 Arabinose operon regulatory protein n=1 Tax=Prevotella oris F0302 RepID=D1QW91_9BACT Length = 92 Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 27/65 (41%), Positives = 40/65 (61%) Query: 211 QRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKS 270 +++ G P+Q I EIR+ +K+ L TN S+ DIA++ GY S F TF+K TP + Sbjct: 26 RKFTGYAPLQYIQEIRLTKSKQLLANTNLSLADIAYQVGYESVDYFSTTFRKKNGITPTA 85 Query: 271 YRKKL 275 YRK + Sbjct: 86 YRKSV 90 >UniRef50_B4WW69 Transcriptional regulator, AraC family protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WW69_9SYNE Length = 291 Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 30/81 (37%), Positives = 45/81 (55%) Query: 192 LENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 L ++ L SQ + +R ++ G TP Q + + RI AK+ L+ T S+ DIA G+ Sbjct: 209 LADLAQLVGVSQSHFSRQFKKSMGLTPYQYLLQQRIERAKQLLKQTQQSLVDIALVCGFD 268 Query: 252 SPSLFIKTFKKLTSFTPKSYR 272 S S F + F+K T TP +YR Sbjct: 269 SHSHFSRQFRKATGMTPSAYR 289 >UniRef50_C1I9D8 Methylated-DNA-[protein]-cysteine S-methyltransferase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I9D8_9CLOT Length = 179 Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 61/101 (60%) Query: 174 LKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQ 233 + +++++++DK F E ++ ++ ++ +L R + + TP I++IRIN AK+ Sbjct: 79 IANSMKEIYDKYYFDEELIKIKISNLHIAKSHLIRVFNKTFSLTPKAYISKIRINKAKEL 138 Query: 234 LEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 L+ ++ S+T+I+++ GY S F FKK+ +P SYR K Sbjct: 139 LKASDKSITEISYDCGYKSLLTFYDNFKKVEGMSPMSYRIK 179 >UniRef50_C0FPB8 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FPB8_9FIRM Length = 304 Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 70/267 (26%), Positives = 114/267 (42%), Gaps = 33/267 (12%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQ--SFYEFGATRI------ 91 H H Y E L+G + +NG GDFV I HQ + G + I Sbjct: 35 HFHYYIEMLYALSGHFRIYLNGIYHEFAAGDFVLINSREVHQIDALSSEGGSYIVVRFLP 94 Query: 92 --LNVGISKRFFEQHYLPLLPYCFVASQVYR--TNNAFLTYVETVISSLN---LRET--- 141 + G+++ FE YL LP+ + +Y +++ L + I L +RE+ Sbjct: 95 ELIYDGMTQSHFELKYL--LPF-ITENSIYEKVISSSILNAKHSAIPGLMNEIIRESEEK 151 Query: 142 ------GLEEFVEMVTFYVINRLRHYREEQVIDD-----VPQWLKSTVEKMHDKEQFSES 190 ++ + + +++ EE +++D + Q L + M + S S Sbjct: 152 QYGYELAIKNHIGGIFLWLLRYWHANGEEPLLEDFENQQLKQQLSPALTYMITNYEKSIS 211 Query: 191 ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGY 250 A E M L S Y +R+ R +NEIRI A+K L T +VT+IA G+ Sbjct: 212 AAE-MAKLCNLSYSYFSRSFNRLLHMNFSDYLNEIRIREAEKLLVSTTQNVTEIASAVGF 270 Query: 251 SSPSLFIKTFKKLTSFTPKSYRKKLTE 277 + S FIK F K +PK Y+K++ + Sbjct: 271 CTTSYFIKQFTKYLHVSPKQYQKQMRQ 297 >UniRef50_B1HSI7 Transcriptional regulator, AraC family n=2 Tax=Bacillaceae RepID=B1HSI7_LYSSC Length = 308 Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 49/91 (53%) Query: 183 DKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 + + + + L+ + A+ S YL+ ++ G + + I + RI+ AKK L TNY + Sbjct: 212 ENQLYGDITLDQLSAICHLSPNYLSSLFKKEVGISFTEYIQQQRIDEAKKLLTFTNYPIL 271 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 DI ++ S FIK FKK T TPK YR+ Sbjct: 272 DIGSLLNFTDQSYFIKVFKKFTGITPKQYRR 302 >UniRef50_B8HZN5 Transcriptional regulator, AraC family n=2 Tax=Bacteria RepID=B8HZN5_CYAP4 Length = 360 Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 1/91 (1%) Query: 184 KEQFSES-ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 ++ F ES A++ +V+ S + L R + G T ++ + +RI AK Q E+++ SV Sbjct: 242 RQCFRESNAIQQIVSQSKIPERTLKRRFKAATGSTLIEYLQNLRIEEAKHQFEVSDKSVE 301 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 I +E GY S F + FK+LT TP YR+ Sbjct: 302 SICYEVGYEEVSFFRRLFKRLTGITPSQYRR 332 >UniRef50_C2CZA7 AraC family transcriptional regulator n=1 Tax=Lactobacillus brevis subsp. gravesensis ATCC 27305 RepID=C2CZA7_LACBR Length = 278 Score = 56.6 bits (135), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 38/260 (14%) Query: 40 HQH-DYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISK 98 HQH ++YE L L G ++RG V IP G H++ V Sbjct: 31 HQHSNHYELYLFLAGNATFWTRASAYPMKRGYLVAIPNGHWHRA-----------VTNDD 79 Query: 99 RFFEQHYLPLLPYCFVASQVYRTN--NAFLTYVETVISSLNLRETGLEEFVEMVTFYVI- 155 +E+ +L + + T+ F I+ L L ET L EFV + + Sbjct: 80 SLYERIFLNIRTNLVKDFSTFDTDLSTCFKVDKSKEINILKLNETDLSEFVSLCDKLIAV 139 Query: 156 --------NRLRH-------YREEQVIDDVPQWLKSTVEKM-HDKEQFSESALENMVALS 199 N +R +D++ ++ + + + +F ++ L N ++LS Sbjct: 140 LDQPTAFGNDIRERILLSDILLLINQVDNITNQPQNIIPALLQNMIRFIDTNLANDLSLS 199 Query: 200 AKSQ------EYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSP 253 A SQ YL R +RY G + + I+E RIN AK L+ SVTD + G+ + Sbjct: 200 AISQHFYLNQSYLNRYFKRYMGLSIHKYISESRINQAKILLK-AGKSVTDACNQCGFGNY 258 Query: 254 SLFIKTFKKLTSFTPKSYRK 273 S FI+ F + +P Y+K Sbjct: 259 SNFIRAFTRYVGISPGKYKK 278 >UniRef50_Q0VT12 Transcriptional regulator MmsR n=2 Tax=Alcanivorax RepID=Q0VT12_ALCBS Length = 305 Score = 56.6 bits (135), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 51/85 (60%), Gaps = 1/85 (1%) Query: 191 ALENMV-ALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAG 249 +L++++ A S S+ + R +R G+TPMQ I+++ A L++++ SV IA + G Sbjct: 217 SLDDLITATSDLSRYHFIREYKRQTGQTPMQAFQRIKVSHACYLLDISDDSVATIALQLG 276 Query: 250 YSSPSLFIKTFKKLTSFTPKSYRKK 274 + P F + FKK+ +P+ YRK+ Sbjct: 277 HDDPYYFSRLFKKMMGISPQKYRKE 301 >UniRef50_D2LWT4 Transcriptional regulator, AraC family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LWT4_BACS4 Length = 294 Score = 56.6 bits (135), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 25/70 (35%), Positives = 42/70 (60%) Query: 204 EYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKL 263 +Y+TR+ ++ G TP+Q +N R++ AK ++ N+ + +A E G+S S F + FKK Sbjct: 214 DYITRSMKKVIGMTPIQFLNHYRLSMAKSKIIRGNHDLDTVARECGFSDVSYFSRIFKKK 273 Query: 264 TSFTPKSYRK 273 TP YR+ Sbjct: 274 EGMTPGQYRR 283 >UniRef50_C6PBN1 Transcriptional regulator, AraC family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PBN1_CLOTS Length = 295 Score = 56.6 bits (135), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 63/255 (24%), Positives = 115/255 (45%), Gaps = 21/255 (8%) Query: 40 HQHDYYEFTLVLTGRYFQ-EINGKRVLLERGDFVFIPLGSHHQ-SFYEFGATRILNVGIS 97 H H+ E + VL+G+ I+G E+GD V I + H S + + + IS Sbjct: 32 HWHESIEISYVLSGKIDDIYIDGIHYTSEQGDIVLINSNAIHSFSVVQGKNRKAVTFFIS 91 Query: 98 KRFFEQHYLPLLPYCFVASQVYRTN-------NAFLTYVETVISSL-NLRETGLEEFVEM 149 F + +Y + F + + + N ++++I + NLR+ L + Sbjct: 92 YEFLKTNYPDIDQIAFDCVSIDQNDEHKIKIFNELRENLDSIIRAFSNLRDDSLAHIKVI 151 Query: 150 -----VTFYVINRLRHYREEQVIDDVPQWLKSTVE-KMHDKEQFSESALENMVALSAK-- 201 + + ++ + ++ ++L E + KE +S+ ++ +SAK Sbjct: 152 GLSYELIYLLLKNFKISKKSFGEIKTKKYLDRLTEITNYIKENYSQDL--SIDIISAKFN 209 Query: 202 -SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTF 260 S EYL+R ++Y G T IN +R+ + + L T+ S+T+IA E G+ + F K F Sbjct: 210 LSPEYLSRFFKKYMGMTIHNYINTVRLEKSYRDLMNTDQSITEIALEHGFPNEKSFNKVF 269 Query: 261 KKLTSFTPKSYRKKL 275 K + TP YRKK+ Sbjct: 270 KTFYNITPNQYRKKI 284 >UniRef50_Q2SQA4 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SQA4_HAHCH Length = 333 Score = 56.6 bits (135), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 47/86 (54%) Query: 189 ESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEA 248 + +LE M A++ + L R ++ G TP+Q + ++RI A++ LE + +V I ++ Sbjct: 240 DVSLEEMAAVARVGERTLQRRFRKALGMTPLQYVQQLRIQRARELLETSMATVERIIWDV 299 Query: 249 GYSSPSLFIKTFKKLTSFTPKSYRKK 274 GY PS F K FK T T YR + Sbjct: 300 GYEDPSSFRKLFKLATGLTMTEYRAR 325 >UniRef50_C3LC07 Transcriptional regulator, AraC family n=7 Tax=Bacillus RepID=C3LC07_BACAC Length = 296 Score = 56.6 bits (135), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 31/95 (32%), Positives = 49/95 (51%) Query: 183 DKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 +++ + L N+ ++ S+ + R Q G T M+ + + R+ A QL T+ + Sbjct: 16 EEDVMEKQTLRNLARIAGFSESHFHRVFQALVGDTVMEYVRKRRLARAAYQLSHTDEKII 75 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 DIAFE G+ S F + FKKL TP YRK+ E Sbjct: 76 DIAFEHGFQSHETFTRAFKKLFQMTPSEYRKQEIE 110 >UniRef50_D0M881 AraC-type DNA-binding domain-containing protein n=9 Tax=Vibrio RepID=D0M881_VIBSE Length = 285 Score = 56.6 bits (135), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 54/239 (22%), Positives = 102/239 (42%), Gaps = 43/239 (17%) Query: 53 GRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLP-- 110 G+ + E R LE G + +P G + G+ + ++ +L L+P Sbjct: 62 GKGWLESGACRYDLEPGSLITVPAGVEN------------GFGMEEEPWQIAWLFLIPDR 109 Query: 111 -YCFVASQV-YRTNNA---FLTYVETVISSLNL-----------RETGLEEFVEMVTFYV 154 + + S + Y+ +A ++T++ S+NL LE + M Sbjct: 110 AWPMIESNISYQLTSAPEVMYACIQTLLRSINLPIDYGGAVGAHSVAQLELMLNMPPSES 169 Query: 155 INRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYY 214 I+R R +V D V ++ + ++E + AL S+ +L R TQ+ + Sbjct: 170 ISR-SQLRLRRVFDLV------------QRQLHKDWSVEQVAALYPCSEPHLHRLTQKQF 216 Query: 215 GKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 G++PM + +R+ +A + L T + + I GY + + F FK +S TP+ +RK Sbjct: 217 GRSPMAHLTRMRMEYAARLLRSTEWPIQHIGEIVGYPTSANFSTRFKAWSSMTPREFRK 275 >UniRef50_A6TRZ8 Response regulator receiver protein n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TRZ8_ALKMQ Length = 529 Score = 56.6 bits (135), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 40/155 (25%), Positives = 74/155 (47%), Gaps = 29/155 (18%) Query: 123 NAFLTYVETVISSLN-LRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM 181 N++L Y+ ++I S+ +R+ L + ++ +HY E ++DV Q + Sbjct: 402 NSYLNYIRSIIFSIEEIRKNELNGLITKALAFI---QKHYNENICLNDVAQEI------- 451 Query: 182 HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSV 241 NM S Y ++ + GK + + E++I +K+ L+ + S+ Sbjct: 452 ------------NM------SYHYFSKFFKESTGKNFVDYLTELKIERSKELLKNQSISI 493 Query: 242 TDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 +I +E GYS P+ F K FKK+T TP +YR ++ Sbjct: 494 KEICYEIGYSDPNYFSKAFKKITGVTPTAYRACIS 528 >UniRef50_A6DG33 Transcriptional regulator, AraC family protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DG33_9BACT Length = 250 Score = 56.6 bits (135), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 48/85 (56%) Query: 192 LENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 L+++ S R ++ +G TP I ++R A + L + S+T++A++ G+S Sbjct: 165 LDDLAEAVCMSTSTFLRNFKKQFGMTPGNYIKQVRYKAACRLLSESALSITEVAYDTGFS 224 Query: 252 SPSLFIKTFKKLTSFTPKSYRKKLT 276 S F + FKK++ TPKSYR+K + Sbjct: 225 DQSHFTREFKKISGVTPKSYRQKFS 249 >UniRef50_Q11KV0 Transcriptional regulator, AraC family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11KV0_MESSB Length = 311 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 48/210 (22%), Positives = 94/210 (44%), Gaps = 12/210 (5%) Query: 69 GDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTY 128 G F+P S + E + R ++ IS FE + F ++ FL+ Sbjct: 80 GSVSFLPANSQRRLRLEAVSWRWASIAISPDHFEDMTGGVHIDAFSTR-----DDRFLSA 134 Query: 129 VETVISSLNLRETGLE-EFVEMVTFYVIN--RLRHYREEQVIDD----VPQWLKSTVEKM 181 + ++ +R+ L +++ + +I+ R+R+ E + + + +P W + Sbjct: 135 LLGQLAWYQVRDGHLNLPYLDAMLTALIHHLRVRYQTESRAVTERLRRLPSWAIRRITDY 194 Query: 182 HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSV 241 + E + + L+ S+ + RA + GKTP+Q INE+RI A + L + Sbjct: 195 IVAQLPGEVRVSMLAKLTGLSEGHFHRAFRATTGKTPLQFINELRIQSAIQILNQHPINT 254 Query: 242 TDIAFEAGYSSPSLFIKTFKKLTSFTPKSY 271 ++A G+SSP+ F + F+K +P +Y Sbjct: 255 AELAVAVGFSSPTYFSRVFRKAVGCSPSNY 284 >UniRef50_Q893H5 Transcriptional regulatory protein n=1 Tax=Clostridium tetani RepID=Q893H5_CLOTE Length = 259 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 2/76 (2%) Query: 202 SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTN--YSVTDIAFEAGYSSPSLFIKT 259 SQ YLTR ++ G + +N++RIN AKK L N Y++ DI+ GYSS F + Sbjct: 175 SQSYLTRVIKQKTGVSFTDYLNKLRINMAKKLLTDNNNDYTINDISNMVGYSSQHYFSRA 234 Query: 260 FKKLTSFTPKSYRKKL 275 FK +PK+YR K+ Sbjct: 235 FKNYMEISPKNYRNKV 250 >UniRef50_A0Q2M6 Transcriptional regulatory protein n=6 Tax=Clostridium RepID=A0Q2M6_CLONN Length = 246 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 28/71 (39%), Positives = 43/71 (60%) Query: 202 SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFK 261 S YL++ ++ G + I +IRI+ AK+ L +N S+ +IAF GY+ P+ F K FK Sbjct: 171 SSSYLSKLFKKEMGINFNRYITKIRIDKAKEILINSNISINEIAFSVGYNEPNYFCKVFK 230 Query: 262 KLTSFTPKSYR 272 K+ + TP YR Sbjct: 231 KIVNMTPSEYR 241 >UniRef50_B3XR19 Transcriptional regulator, AraC family n=2 Tax=Lactobacillus RepID=B3XR19_LACRE Length = 311 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 57/263 (21%), Positives = 117/263 (44%), Gaps = 30/263 (11%) Query: 40 HQHDYYEFTLVLTGRYFQEI-NGKRVLLERGDFVFIPLGSHHQS--------------FY 84 +H +E +V+ G EI + ++L GD + I G+ H + + Sbjct: 40 QKHQVFEVMIVIDGYQLTEIRDHDSMILGPGDGIIIAPGTLHTNSNMSKAAPMTYMCLHF 99 Query: 85 EFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLR---ET 141 +F ++ + IS +P ASQ L +++ S +++ E Sbjct: 100 DFEDIQLRSQIIS--LISNQLIPASSQLAKASQKMLNGIIKLCRNKSLSSDFSIQVEIEI 157 Query: 142 GLEEFVEMVTFYVINRLRHY-------REEQVIDDVPQWLKSTVEKMHDKEQFSESALEN 194 L ++++ V + + H +E Q+ D+ +++ V +K F+ S L Sbjct: 158 LLLKYLKQVNSLIKEKYSHNSSLPFSNKEAQISRDLVIAIENRVNNDDEKPSFNFSDLCK 217 Query: 195 MVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPS 254 + +S+ Y R ++ YG TP+ I+ + A++ LE + S+ ++A+ G ++ S Sbjct: 218 ELGISSG---YGHRVFKKVYGTTPLHFIDREKYKKAQRLLEYSGNSIEEVAYMVGAANVS 274 Query: 255 LFIKTFKKLTSFTPKSYRKKLTE 277 +F K FKK + ++P YRK++ + Sbjct: 275 IFSKQFKKWSGYSPSEYRKQIIK 297 >UniRef50_Q0ARR3 Transcriptional regulator, AraC family with amidase-like domain n=1 Tax=Maricaulis maris MCS10 RepID=Q0ARR3_MARMM Length = 349 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 3/92 (3%) Query: 185 EQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDI 244 E S AL N LS + + R+ + Y ++P Q + IR++ AK L ++ + ++ Sbjct: 255 EDLSVEALANRACLS---ERHFRRSFKAIYNESPAQAVERIRVDIAKNWLMASSAPIAEV 311 Query: 245 AFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 A G+ S F + F++LTS P YR++ + Sbjct: 312 ALLVGFQSADAFRRVFERLTSINPSEYRRRFS 343 >UniRef50_C6JJY6 Transcription regulator n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JJY6_FUSVA Length = 288 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 1/84 (1%) Query: 191 ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGY 250 +LE+M +++Y + + KTPM+ +N RI A ++++ + S+TD+A++ G+ Sbjct: 199 SLEDMAKTIKMNEKYFCKFFKEITKKTPMEYLNHYRIECACEKIKFFDSSITDVAYDCGF 258 Query: 251 SSPSLFIKTFKKLTS-FTPKSYRK 273 + S F K FKK S TP+ Y K Sbjct: 259 NDTSYFTKVFKKYNSGMTPREYSK 282 >UniRef50_B4WTP1 Transcriptional regulator, AraC family protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WTP1_9SYNE Length = 294 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 53/81 (65%) Query: 194 NMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSP 253 ++ +L+ S+ Y +R+ ++ G +P Q + + R+ AK+ L+ + S++DIA + G+++ Sbjct: 214 DLASLTNMSKSYFSRSFKQSVGISPYQYVIQQRVERAKQLLKQQSISISDIALDCGFANQ 273 Query: 254 SLFIKTFKKLTSFTPKSYRKK 274 + K F+++T TPK+Y+K+ Sbjct: 274 THLTKAFRQMTGTTPKAYQKE 294 >UniRef50_C4Z9T9 Ada regulatory protein/6-O-methylguanine-DNA methyltransferase n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4Z9T9_EUBR3 Length = 276 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 61/105 (58%), Gaps = 6/105 (5%) Query: 175 KSTVEKMHDKEQFSESALENMVALSAKSQE------YLTRATQRYYGKTPMQIINEIRIN 228 +++ + H ++F E ++M++L + ++ YL+ YGK+P+ +NE+R+ Sbjct: 166 QNSSRECHKVKRFIEHNYQSMISLDSLAENCSLSKYYLSHRFAELYGKSPIAYLNEVRLA 225 Query: 229 FAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 A+ L TN+S+ +IA G+SS S F ++F+K +P+ +RK Sbjct: 226 SARDLLLTTNHSIEEIAGCIGFSSTSYFSQSFQKNFHESPQQFRK 270 >UniRef50_C3R8A9 Sensor protein n=2 Tax=Bacteroides RepID=C3R8A9_9BACE Length = 1441 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 25/101 (24%), Positives = 55/101 (54%) Query: 174 LKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQ 233 ++ ++ + K Q + +E++ + R + G TP+ ++ ++R+ A + Sbjct: 1338 IQRVIQVVESKLQEQDFKIEDLADTMKMGRTVFYRKVKSILGVTPIDLVKDMRVKRAIQL 1397 Query: 234 LEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 L+ NY+++ +A+ +G+SSP F + FK+L + TP Y+ K Sbjct: 1398 LDSGNYNISQVAYMSGFSSPQYFSRVFKELKNCTPSEYKTK 1438 >UniRef50_C6XTR7 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6XTR7_PEDHD Length = 323 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 3/90 (3%) Query: 187 FSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAF 246 +S + MVA+S ++ E R ++ G + ++ I +++ F KKQLE ++ +I + Sbjct: 234 YSVDEICEMVAVSRRTFE---RHFKQCTGNSILEYIQRVKVEFVKKQLEAGKKTINEIIY 290 Query: 247 EAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 EAGY+ F K FK+ T +P YRK+ Sbjct: 291 EAGYTDIDAFRKVFKRFTDLSPIGYRKRFA 320 >UniRef50_A8SV60 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SV60_9FIRM Length = 283 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 65/270 (24%), Positives = 111/270 (41%), Gaps = 49/270 (18%) Query: 37 SGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFI-PLGSH----HQSFYEFGATRI 91 S LH H Y E +++G N +L +GD ++ PL H ++ E + Sbjct: 24 SELHWHYYSEVLYIVSGSIRVICNDGETVLRKGDMCYLYPLQLHSIKADKTCAEPVKYAV 83 Query: 92 LNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETG-------LE 144 + + Q Y+ + CF VY+T TVI S L+E+ E Sbjct: 84 IKFNMYTLGIPQTYIRKMYDCF----VYKTETTDFC---TVIRSEKLKESMADIVQDIFE 136 Query: 145 EFVEMVTFYVI--------------------NRLRHYREEQVI--DDVPQWLKSTVEKMH 182 E++E Y++ +H R + + + + +++ + H Sbjct: 137 EYMEKREMYMLAVQSGIYKLLIIMARQMKTNGDFKHKRSDGDVYFNHILEYIDA-----H 191 Query: 183 DKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 EQ L M ++S + R+ + YG++ + I IR+N A+ L ++YS+ Sbjct: 192 SSEQIEVQDLAEMCSMSYS---HFARSFKARYGRSCKEYILYIRLNKAQNMLLYSDYSME 248 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 IA E G+S S FI+ +KK TPK R Sbjct: 249 YIAQENGFSDSSYFIRVYKKWRGITPKQER 278 >UniRef50_A8S1Q1 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8S1Q1_9CLOT Length = 322 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 61/259 (23%), Positives = 101/259 (38%), Gaps = 28/259 (10%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH-QSFYEFGATRI-LNVGIS 97 H H+Y E + G ++G+ + L+ G+ +F L H Q G I +N I Sbjct: 65 HTHNYVEVIYMCRGETTHVVDGRELKLKEGELLF--LNQHAVQEIQPAGQDDIAVNFIIL 122 Query: 98 KRFFEQHYLPL----------LPYCFVASQVYRTNNAFL--------TYVETVISSLNLR 139 FF+ + + + C Y F VE ++ SL Sbjct: 123 PEFFDTAFRMMGEEENLLRDFIVGCLCDDTRYGRYLHFQIADVLPVQNLVENLVWSLMHE 182 Query: 140 ETGLEEFVEMVTFYVINRLRHYREEQVID-----DVPQWLKSTVEKMHDKEQFSESALEN 194 G++ + ++ L HY ++ Q L V + D E + E +L Sbjct: 183 REGMQAMNQTTMGLLLRHLMHYTGRIRVNRDSEQSFEQQLTLQVLRYID-EHYREGSLTE 241 Query: 195 MVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPS 254 + AL +L+RA R G+ +++ R+N A L T V D++F GY + S Sbjct: 242 LAALMGYDVYWLSRAINRLLGRNYKELLQIKRLNQAAFLLHSTRMPVADVSFAVGYDNTS 301 Query: 255 LFIKTFKKLTSFTPKSYRK 273 F + F+ +PK YRK Sbjct: 302 YFYRIFRTYYGMSPKEYRK 320 >UniRef50_Q2SNN6 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain n=2 Tax=Gammaproteobacteria RepID=Q2SNN6_HAHCH Length = 344 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 37/148 (25%), Positives = 71/148 (47%), Gaps = 12/148 (8%) Query: 129 VETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFS 188 + + +S L+L ++ ++ +TFY ++ + +W++S H E FS Sbjct: 196 LASAVSKLHLFDSKRQQQTPYITFYGYKS----HKDDAVKKAQEWMES-----HYAEHFS 246 Query: 189 ESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEA 248 ++++ AL+ R + G+ P+ + ++R+ K QLE T S +I +E Sbjct: 247 ---VDDVAALAGLGGRTFKRRFKEATGENPINYLQQLRVEAVKHQLETTLKSSNEIIWEV 303 Query: 249 GYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 GY S F + FK+ T T + YRK+ + Sbjct: 304 GYEDISSFRRLFKRATGCTMEQYRKRFS 331 >UniRef50_C9RVZ3 Two component transcriptional regulator, AraC family n=4 Tax=Geobacillus RepID=C9RVZ3_GEOSY Length = 513 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 7/156 (4%) Query: 127 TYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLK----STVEKMH 182 ++ ++S L +R L F + + R +++ D+ W + + K Sbjct: 355 VWLGRLLSELGIRYERLASFASCRSAAELKRAALDELDRIAADLEVWRQQQAYGKLGKAK 414 Query: 183 D--KEQFSES-ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNY 239 D ++E LE + + S Y ++ + ++G T + + +RI AK+ L T+ Sbjct: 415 DYIDRHYAEPLTLEEVAEQAGISPYYFSKLFKEHFGITFIDYVTNVRIERAKEALAETDQ 474 Query: 240 SVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 S+ +I F GY+ P+ F + FKK T +P YRKK+ Sbjct: 475 SLKEICFSVGYNDPNYFSRVFKKQTGLSPSEYRKKV 510 >UniRef50_P45008 Uncharacterized HTH-type transcriptional regulator HI1052 n=17 Tax=Haemophilus influenzae RepID=Y1052_HAEIN Length = 298 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 60/263 (22%), Positives = 107/263 (40%), Gaps = 39/263 (14%) Query: 47 FTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKR---FFEQ 103 F L+ G + +N K+ L+ GD F+P H Y A + ++ K FE Sbjct: 41 FHLIEQGECWLTLNEKQFHLKEGDVFFLPQNQPHSMHY--SANKRADIPTKKSHQGLFEL 98 Query: 104 HYL-----PLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMV-------- 150 H + L +C Y +A LT +NL +T + V++ Sbjct: 99 HQIGRGTPDLKMFC---GNFYYQQDALLTASMPEYLHINLCDTPIHPLVQLFLQEAQKND 155 Query: 151 -----------TFYVINRLRHYREEQVIDD------VPQWLKSTVEKMHDKEQFSESALE 193 +I LRH ++ +I+ + L + + + + Q ++ +E Sbjct: 156 AGTKSVVDALSNVLLIYILRHAIQQNLIEQGILFALQDKRLNTALIAILQQPQ-NDWHIE 214 Query: 194 NMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSP 253 + L+ S+ R Q++ G +P + + ++R+ A L+ + SV IA E GY S Sbjct: 215 QLAELATMSRANFIRIFQQHIGMSPGRFLTKVRLQSAAFLLKQSQQSVLAIALEVGYQSE 274 Query: 254 SLFIKTFKKLTSFTPKSYRKKLT 276 + F K FK +P YRK ++ Sbjct: 275 AHFCKVFKNYYQLSPSQYRKSVS 297 >UniRef50_UPI0001787EF3 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787EF3 Length = 298 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 3/94 (3%) Query: 182 HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSV 241 H KE F +ALE + A Y+ R +R+ GKTP+Q + +R+ AKK L T + Sbjct: 197 HWKEPFERAALEEKLHFQAS---YIARCMKRHIGKTPLQYVLHLRLEEAKKLLGGTVLGI 253 Query: 242 TDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 ++IA G + + F TP +YR+ L Sbjct: 254 SEIAERVGIRDSNYMTRLFTAKVGMTPGAYRQML 287 >UniRef50_Q8YSB8 Transcriptional regulator n=2 Tax=Nostocaceae RepID=Q8YSB8_ANASP Length = 306 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 29/229 (12%) Query: 66 LERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFF--------EQHYLPLLPYCFVASQ 117 + +GD IP +HH S ++ T+ L + + FF + + + P F A Sbjct: 86 IAKGDVAIIPAQTHHISRWQ-SETKFLVLSVEPAFFTRMVIEAGDLQKIEIKPR-FAAPD 143 Query: 118 --VYRTNNAFLTYVETVISSLNLRETGLEEFVE-MVTFYVINRLRHY--REEQVIDD--- 169 V + A T +E+ G ++E + T I+ L+HY ++DD Sbjct: 144 PLVQQIGLALQTELES-------EHKGSSIYIESLTTTLCIHLLKHYCVTGGTILDDHHH 196 Query: 170 --VPQW-LKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIR 226 + W L+ + +H+ + L ++ S Y +R ++ G P Q + R Sbjct: 197 KGLSHWKLRQAISYIHENLD-QDLTLVDISTAVGMSMYYFSRQFKQSTGFAPHQYVMNCR 255 Query: 227 INFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 I AKK L TN ++ I + G+ S S F F+KL TP+ YR+++ Sbjct: 256 IERAKKLLGSTNKTIEQICTQVGFQSQSHFTNVFRKLMGITPRVYREQV 304 >UniRef50_C6D4D7 Transcriptional regulator, AraC family n=3 Tax=Firmicutes RepID=C6D4D7_PAESJ Length = 289 Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 64/266 (24%), Positives = 113/266 (42%), Gaps = 31/266 (11%) Query: 39 LHQH-DYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGIS 97 LH H D+ E +VL G +N + +++GD VF+ G+ ++ + RI N+ Sbjct: 30 LHDHVDFSELVIVLNGNATHIVNTEVSFIKKGD-VFVIDGATSHAYKDPHDFRICNIMYR 88 Query: 98 KRFFEQHYLPL---LPY--CFVASQVYRTNNAFLTYVETVISSL----NLRETGLEE--- 145 L + Y FV YR F + + I SL +L +EE Sbjct: 89 PDILTSAGPDLRTSIGYQALFVLEPFYRNIQPFNSKLSLPIPSLEYVSSLAAFMIEEYTN 148 Query: 146 ------------FVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALE 193 F+E+V + ++R +++Q I L + + M D E Sbjct: 149 KLQGYQTMLRSRFMELVVY--LSRQYQNQDQQGIQGNLMHLANAISFMED-HYLEPLTRE 205 Query: 194 NMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSP 253 + S S +L R Q YY TP + +R+ A L+ T +T++++++G++ Sbjct: 206 QIADKSGISVRHLNRIFQSYYPTTPFAYLLRLRLEHACHLLKTTPVPITEVSYKSGFNDS 265 Query: 254 SLFIKTFKKLTSFTPKSYRKKLTEFN 279 + F + F K+ PK YR++ +FN Sbjct: 266 NYFTRQFTKVYGLAPKVYRRE--QFN 289 >UniRef50_B2HU78 AraC-type DNA-binding domain-containing protein n=14 Tax=Acinetobacter RepID=B2HU78_ACIBC Length = 342 Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 41/69 (59%) Query: 212 RYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSY 271 ++ G + QI NEIR + A ++L +N S+ DI+ + + PS F + FKK T +P +Y Sbjct: 274 KHEGVSYQQIKNEIRCDIAIERLSKSNDSIQDISEDLNFHDPSAFHRAFKKWTGVSPGAY 333 Query: 272 RKKLTEFNQ 280 R LT F Q Sbjct: 334 RDNLTTFKQ 342 >UniRef50_UPI0001BC2F1F 2-isopropylmalate synthase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC2F1F Length = 288 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 26/71 (36%), Positives = 48/71 (67%) Query: 202 SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFK 261 S++Y++R ++++ T + +N +R+ +AK L+ TN S+TD+A +G+ + S FI++FK Sbjct: 210 SEKYISRYFKKHFNITFSKYVNHMRLLYAKNLLDTTNISITDVALSSGFPNVSYFIRSFK 269 Query: 262 KLTSFTPKSYR 272 + TP SYR Sbjct: 270 ESYGKTPFSYR 280 >UniRef50_A7VNA5 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VNA5_9CLOT Length = 282 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 14/168 (8%) Query: 112 CFVASQVYRTNNAFLTYVETVISSLNLRETGLEE-----FVEMVTFYVINRLRHYREEQV 166 CFV Q + +L E +I L L+ G + F E++ RLR + Q+ Sbjct: 121 CFVGEQ-----DRYLRCFEEIIQELQLQPPGFQRLCALRFEELLLSMGRQRLR-LKNPQL 174 Query: 167 IDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIR 226 D L + V K + +E+ S +L R ++ G++P Q + +IR Sbjct: 175 AGDS---LVTQVLNDMYKTYYRNYTIEDYAKRHNVSVCWLIRRFKQVTGESPNQYLIQIR 231 Query: 227 INFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 I A++ LE + ++ +IA GY SP F + FK+L +PK YR++ Sbjct: 232 IRRARELLESSRLNMGEIASVLGYESPLYFSRQFKQLQGVSPKRYREQ 279 >UniRef50_C6D2P5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D2P5_PAESJ Length = 189 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%) Query: 180 KMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNY 239 + H EQ + S L +++ LS +L R +R G TP I +IRI A K L T+ Sbjct: 94 EAHYYEQLTLSHLADVLHLSPY---HLQRTFKRLTGLTPAAYIQQIRIREAMKLLASTHL 150 Query: 240 SVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 VTDIA + GY++ + F F+ +T TP YR Sbjct: 151 PVTDIAGQVGYTNAAHFTTRFQNVTGLTPTQYR 183 >UniRef50_D2EHC6 Transcriptional regulator n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EHC6_PEDAC Length = 306 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 39/133 (29%), Positives = 68/133 (51%), Gaps = 6/133 (4%) Query: 143 LEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKS 202 L +F+E + NR RE +V + +++ + + E+F+ +++ S Sbjct: 164 LSKFIENHPVHCSNRFSE-REAEVARQIAILIENNI---GNPEKFN--TFQDICNEIKIS 217 Query: 203 QEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKK 262 Y R ++ YG TP+ + + R AK L +YSV D+A G ++ S+F K+FKK Sbjct: 218 DGYGYRTFKKVYGMTPLHYVEKQRYRKAKLLLSYLDYSVEDVAEMVGVTNSSMFSKSFKK 277 Query: 263 LTSFTPKSYRKKL 275 + TP+ YRK+L Sbjct: 278 WSGQTPRDYRKQL 290 >UniRef50_A9E3W0 Polyphosphate kinase n=1 Tax=Kordia algicida OT-1 RepID=A9E3W0_9FLAO Length = 566 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 35/94 (37%), Positives = 47/94 (50%), Gaps = 4/94 (4%) Query: 190 SALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFA----KKQLEMTNYSVTDIA 245 L N+ + YLT+ + GKT Q +NE+RIN+A K + Y++ IA Sbjct: 472 CTLANLAKKVKTNPTYLTKILKEEKGKTFYQYLNELRINYAITRLKADKQFRKYAIKHIA 531 Query: 246 FEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFN 279 E GY SP F K FKK T P Y K+L + N Sbjct: 532 LEVGYKSPESFTKHFKKATGIYPSYYIKELEKRN 565 >UniRef50_C7R5W7 Transcriptional regulator, AraC family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R5W7_KANKD Length = 461 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 50/91 (54%) Query: 187 FSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAF 246 ++++L++ + YL + Q+Y G +P+ N +R+ FAK+ L T +TDIAF Sbjct: 100 LNQTSLQDFSESMGITDRYLRKLFQQYLGVSPITYANHLRLMFAKQLLHQTQLPITDIAF 159 Query: 247 EAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 AG++S F +FK +P + R KL + Sbjct: 160 IAGFNSVRRFNDSFKATMKLSPSNLRNKLNK 190 >UniRef50_Q0SUF5 Transcriptional regulator, AraC family n=4 Tax=Clostridiales RepID=Q0SUF5_CLOPS Length = 77 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/74 (40%), Positives = 41/74 (55%) Query: 202 SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFK 261 S +Y R KTP++ +N RI + ++L T S+T+IA G++ S FIKTFK Sbjct: 2 SPKYFCRFFHEMINKTPIEYLNYYRIEISCEKLIATELSITEIALNCGFNDVSYFIKTFK 61 Query: 262 KLTSFTPKSYRKKL 275 K TPK Y K L Sbjct: 62 KHKGLTPKQYLKSL 75 >UniRef50_UPI000197BA84 hypothetical protein BACCOPRO_03194 n=1 Tax=Bacteroides coprophilus DSM 18228 RepID=UPI000197BA84 Length = 292 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 50/85 (58%) Query: 191 ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGY 250 ALE++ + L R +++ GK + + E+RI++A K L N +++ +A++ GY Sbjct: 208 ALEDIACNVGMNPSALCRYYKKHTGKRMFEYLTELRISYATKLLINKNINISQVAYDCGY 267 Query: 251 SSPSLFIKTFKKLTSFTPKSYRKKL 275 +S S F FK++T +TP Y +KL Sbjct: 268 NSLSHFNHQFKQVTGYTPSEYAQKL 292 >UniRef50_A0LXA2 Sensor protein n=1 Tax=Gramella forsetii KT0803 RepID=A0LXA2_GRAFK Length = 907 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 34/127 (26%), Positives = 67/127 (52%) Query: 148 EMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLT 207 E + +Y N++ R+E + ++LK + + + + ++E++ A S+ L Sbjct: 781 EKLRYYYTNKIDEVRDENFANAEQKFLKDLNSLIDNNLRNTGFSVEDLAARLKISRVQLY 840 Query: 208 RATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFT 267 R + G + + IN R+N AK L+ ++ ++++IA+E GYSSP F +FKK + Sbjct: 841 RKVKALLGVSISEYINSQRLNKAKNLLQDSDMNISEIAYEVGYSSPGYFSTSFKKEYGIS 900 Query: 268 PKSYRKK 274 PK + + Sbjct: 901 PKELKSR 907 >UniRef50_Q8NYT6 Uncharacterized HTH-type transcriptional regulator MW0077 n=54 Tax=Staphylococcus aureus RepID=Y077_STAAW Length = 745 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 8/181 (4%) Query: 96 ISKRFFEQHYLPL-LPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYV 154 ++ +F + H L L +++ N V T I L + ++ V + ++ Sbjct: 78 LADKFDDAHCLYFHLTDATTTKNIHQLRNIMARLVSTHIRHNELSKLTEQQLVIQLLMHM 137 Query: 155 INRL-RHYREEQVI--DDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQ 211 I+ + R Y Q I DD + +E +H E S S L V S + +L++ Sbjct: 138 IHYVPRTYHSNQSILNDDKVNQVCDYIE-LHFHEDLSLSELSEYVGWS---ESHLSKKFT 193 Query: 212 RYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSY 271 G +N RI AK L T+ ++TDIA + G+SS + F +TFK T TPK Y Sbjct: 194 ESLGVGFQHFLNTTRIEHAKLDLTYTDETITDIALQNGFSSAASFARTFKHFTHQTPKQY 253 Query: 272 R 272 R Sbjct: 254 R 254 >UniRef50_B1XRF4 Transcriptional regulator, AraC family n=1 Tax=Synechococcus sp. PCC 7002 RepID=B1XRF4_SYNP2 Length = 362 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 18/167 (10%) Query: 121 TNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEK 180 T+ L Y + ++ET ++ ++ NR R Y +EQ V +L++ Sbjct: 191 TDAMVLDYAAQAPITAAMQET--LGYILSCPYHGANR-RRYLQEQAFTLVSLYLQAIAAY 247 Query: 181 MHDKEQFS---ESA------LENMVALSAKSQEY------LTRATQRYYGKTPMQIINEI 225 ++QF ESA L N ++ A +++ L + + YG TP + + + Sbjct: 248 ARLEKQFDYIHESAAILRKELSNPPSIEALARQVGTNRLKLNQGFHQMYGTTPFRYLRDC 307 Query: 226 RINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 R+ A+K L T SV+D+A + GY SPS F F++ PK+++ Sbjct: 308 RVRQARKLLMTTELSVSDVACQVGYGSPSRFTTAFRQQFGLNPKAFQ 354 >UniRef50_Q15ZQ2 Transcriptional regulator, AraC family with amidase-like domain n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15ZQ2_PSEA6 Length = 328 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 7/95 (7%) Query: 185 EQFSES----ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYS 240 E F++S AL N + +S ++ R Q+ G+ P + + +RI AK +L T S Sbjct: 228 EHFTQSVELQALANQIGMSRRT---FIRRFQKATGELPSRYLQRLRIEAAKHRLGNTQDS 284 Query: 241 VTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 + I GY S F K FK LT TP+ YR++L Sbjct: 285 IKTIGMGVGYRDISSFSKVFKSLTDVTPREYRQRL 319 >UniRef50_A5G651 Two component transcriptional regulator, AraC family n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G651_GEOUR Length = 266 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 1/77 (1%) Query: 199 SAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIK 258 + S + ++ ++ G T +N IRI A L+ TNYS+TD+AFE GY + F K Sbjct: 184 AGMSMYHFSKIFKKIMGITYQDHLNNIRIETAMVLLK-TNYSITDVAFEVGYEDITHFGK 242 Query: 259 TFKKLTSFTPKSYRKKL 275 TFKK+ + P YRK + Sbjct: 243 TFKKIVGYPPSKYRKNV 259 >UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTF5_PAESJ Length = 294 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 54/258 (20%), Positives = 112/258 (43%), Gaps = 23/258 (8%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGA---------- 88 LH HD E LV G ++ + L+ G+ +F+ G H + G Sbjct: 35 LHWHDELELLLVTEGTAVFRVDLQDYELQAGEAIFVNSGELHSGYVVGGKPCSFDAVVFH 94 Query: 89 TRILNVGISKRFFEQHYLPLLPYCF-VASQVYRTNNA---FLTYVETVISSLNLRETGLE 144 + + + G F+++ P+L + V + + R L ++ + + E Sbjct: 95 SSLFSSGSIDYLFDRYISPVLEKRYEVPAHLRREPGPGMELLAMLDQIFEVHRNEQAASE 154 Query: 145 EFVEMVTFYVINRLRHYREEQVIDDVPQ------WLKSTVEKMHDKEQFSES-ALENMVA 197 ++ + F ++ +L + V Q LK+ +E + ++ ++E L+ + Sbjct: 155 LTIKGLLFSILAKLVSLGKPSVRVKPEQEGYRIERLKTVIEYI--EQNYAEPIPLQKLAE 212 Query: 198 LSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFI 257 L+ S+ Y R +R K+P++ +N R+ A +L T+ + ++A + G++S S F Sbjct: 213 LARMSESYFCRFFKRITTKSPIEYMNSYRVQQAASRLRQTDAKIMEVALDVGFNSLSYFN 272 Query: 258 KTFKKLTSFTPKSYRKKL 275 F++ TP+ YR +L Sbjct: 273 TVFRQRFGCTPREYRSRL 290 >UniRef50_C5EHH5 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHH5_9FIRM Length = 302 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 44/84 (52%) Query: 192 LENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 L+++ + S Y+ + Y +PM +N +RI A++ L T SV+DIA + G+ Sbjct: 218 LDSLCSTVNLSPSYIIKLFNHYTSLSPMAYVNRVRIEAAREMLAETPLSVSDIAAQTGFK 277 Query: 252 SPSLFIKTFKKLTSFTPKSYRKKL 275 F K FK +T TP+ YR L Sbjct: 278 DSFYFSKKFKAVTGITPRQYRNSL 301 >UniRef50_Q0I0N1 Transcriptional regulator, AraC family with amidase-like domain n=7 Tax=Shewanella RepID=Q0I0N1_SHESR Length = 347 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 33/123 (26%), Positives = 63/123 (51%), Gaps = 8/123 (6%) Query: 152 FYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQ 211 F ++ + +++VI +V QW++ H E + + AL ++ L R + Sbjct: 214 FMTMDLMTSSHKDEVIWNVQQWMQH-----HLTEPLLLDDIADKFALGKRT---LIRRFK 265 Query: 212 RYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSY 271 + +TP + +R++ AK+ LE T+ + ++ GY S F K F +LTS TP++Y Sbjct: 266 KALNETPASYVQRLRVDEAKRLLETTSLGLEEVVTRVGYEDVSSFRKLFIQLTSLTPRAY 325 Query: 272 RKK 274 R++ Sbjct: 326 RQR 328 >UniRef50_B0C647 Transcriptional Regulator, AraC family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C647_ACAM1 Length = 204 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/90 (33%), Positives = 49/90 (54%) Query: 183 DKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 D +E L ++ L SQ + R ++ G++P Q + R+ AK L+ TN + Sbjct: 113 DAHLGNEITLADLAVLVDISQFHFGRLFKQSLGRSPYQYLMLQRVERAKTLLKRTNQPIV 172 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 +IA E G++S S F + F+++T TPK YR Sbjct: 173 EIALECGFNSHSQFGRKFRQMTGMTPKVYR 202 >UniRef50_C0AAT3 AraC-type DNA-binding domain-containing protein-like protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0AAT3_9BACT Length = 341 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 29/81 (35%), Positives = 51/81 (62%), Gaps = 1/81 (1%) Query: 196 VALSAK-SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPS 254 +A AK S+E++ R ++ G+T + +RI A++ L + VT+IA G+SSP+ Sbjct: 249 IAWQAKLSREHVARTFRQQTGQTVFDYLARVRIEAAQQLLTDSALPVTEIAHRTGFSSPT 308 Query: 255 LFIKTFKKLTSFTPKSYRKKL 275 LF + FK+L TP++YR+++ Sbjct: 309 LFGRVFKRLIGQTPQAYRQEV 329 >UniRef50_A8SR16 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SR16_9FIRM Length = 306 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 60/107 (56%), Gaps = 1/107 (0%) Query: 167 IDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIR 226 +D VP +L S +M DK +L+++ A S+ + R ++G++PM+ +N R Sbjct: 189 MDCVPSYLLSVKNQM-DKNYAEPLSLDDLEATYRISRYRICREFSFHFGESPMRYLNSRR 247 Query: 227 INFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 I+ AK+ L T+ SV ++ + G + + FI FKK T TP S+++ Sbjct: 248 IDAAKRLLLTTDLSVHEVGSQVGIENTNHFINLFKKDTGTTPLSFKQ 294 >UniRef50_UPI0001C356F7 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C356F7 Length = 268 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 66/251 (26%), Positives = 108/251 (43%), Gaps = 23/251 (9%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKR 99 H H +YEF + +G IN +E GD +F+ G H++ Y V IS Sbjct: 20 HWHTHYEFYYLYSGHCKIFINHTLYYVEPGDIIFLKPGEIHRTTYHSSPVN-ERVTIS-- 76 Query: 100 FFEQHYLPLLP---------YCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMV 150 F+ YL + Y F S+V N + VE +I + ETG + F ++ Sbjct: 77 -FDGEYLDSMKELCGEENVEYIFRNSKV-TVPNGNRSRVEELIRRIEYEETGQDGFSPLM 134 Query: 151 ---TFY-VINRLRHYREEQVIDDVPQWLKSTVEK----MHDKEQFSESALENMVALSAKS 202 FY ++ L +E + + + T+E ++D Q + LE + LS S Sbjct: 135 KKGCFYELLVSLSRCQEAETDHGRLEIGEETIEAAAKYIYDHYQ-NPITLEEVAELSHMS 193 Query: 203 QEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKK 262 Y +R + G + + IRI A + L + SVT+IA G+ + F F+K Sbjct: 194 PAYFSRKFKAVTGFGYKEYLTNIRIREASRLLLHSACSVTEIADRCGFGDGNYFGDAFRK 253 Query: 263 LTSFTPKSYRK 273 +P+++RK Sbjct: 254 AKGVSPRAFRK 264 >UniRef50_D2LZT6 Two component transcriptional regulator, AraC family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LZT6_BACS4 Length = 512 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 3/94 (3%) Query: 182 HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSV 241 H E S L V LS Y+++ + G + + E RI AK+ L+ + S+ Sbjct: 418 HSHEDISLDKLAKKVGLSPI---YMSKLFKEKLGVNYIDFLTECRIEKAKQLLKRPDKSI 474 Query: 242 TDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 +I F+ GY P+ F K FKK+ +PK YRK + Sbjct: 475 KEITFDVGYHEPNYFSKVFKKMCGVSPKEYRKSI 508 >UniRef50_C6JCU7 Transcriptional regulator n=3 Tax=Ruminococcus RepID=C6JCU7_9FIRM Length = 282 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 29/84 (34%), Positives = 46/84 (54%) Query: 191 ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGY 250 L+ + A + S +Y R +TP+ +N RI A QL T+ S+T+IA+ G+ Sbjct: 199 TLQELSASVSMSPKYFCRFFSEMTHQTPVDYLNRQRIEEACLQLAATDDSITEIAYRNGF 258 Query: 251 SSPSLFIKTFKKLTSFTPKSYRKK 274 + S FI+TFKK TP Y+++ Sbjct: 259 NDLSYFIRTFKKYKGMTPGKYKRR 282 >UniRef50_C6D8S9 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8S9_PAESJ Length = 534 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 28/70 (40%), Positives = 45/70 (64%) Query: 205 YLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLT 264 YL+R ++ GK+ + + R+ + ++L++TN+ ++DIA GY+S S F K FKK T Sbjct: 460 YLSRLFRKETGKSLTDYMVDRRMFRSIRELKLTNHKISDIAISVGYASFSHFSKQFKKST 519 Query: 265 SFTPKSYRKK 274 TP+ YRKK Sbjct: 520 GMTPQDYRKK 529 >UniRef50_A6TGX0 Regulation of superoxide response regulon n=6 Tax=Klebsiella RepID=A6TGX0_KLEP7 Length = 122 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/111 (27%), Positives = 57/111 (51%), Gaps = 9/111 (8%) Query: 163 EEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQII 222 ++ V+ D+ W+ + ++K + ++++ +S S +L R + Y+ ++PM+ I Sbjct: 13 QQSVLSDLLLWIDNNLDK--------KLTVDDLSDISGYSPWHLFRLFRHYFDRSPMEYI 64 Query: 223 NEIRINFAKKQLEMT-NYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 + R++ + L T Y + DI GY S F +TFKK + TP YR Sbjct: 65 RQQRMSLCCRLLLTTPGYRIVDICMMVGYDDLSAFNRTFKKYHALTPTQYR 115 >UniRef50_A7B0C8 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0C8_RUMGN Length = 301 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 68/257 (26%), Positives = 113/257 (43%), Gaps = 22/257 (8%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLG----SHHQSFYEFGATRILNVG 95 H H+ YE + G N + +++G + + +H G TRI+ + Sbjct: 30 HFHNEYEIYFLTEGERLFFFNNRAYQVKKGSLILVDTNLIHMTHAPEDDTTGYTRII-LY 88 Query: 96 ISKRFFEQH-----YLPLLPYCFVASQVY----RTNNAFLTYVETVISSLNLRETGLEEF 146 I K +Q +L L+P+ VY + FL E + + + R + Sbjct: 89 IDKFKMQQFDEKFPHLNLVPFFREHYGVYNLTQKQQEKFLHMYEVLKTEFSNRSRSYKAL 148 Query: 147 VEM-VTFYVINRLRHYREEQVIDDVPQWLKS----TVEKMHD--KEQFSES-ALENMVAL 198 +EM + Y I+ +R E I D KS T+ + D + ++ES +L+ + + Sbjct: 149 IEMEIIHYFIDFIRDNPELTPIKDETAIHKSSKYQTIYNIADYISDHYAESISLDGLAGV 208 Query: 199 SAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIK 258 S+ YL+R+ + G + +N +R AK+ LE T SV++IA GY S + F K Sbjct: 209 FYLSKFYLSRSFKEVTGYGVNEYVNILRTKRAKQLLEETTLSVSEIAGTVGYESITYFEK 268 Query: 259 TFKKLTSFTPKSYRKKL 275 FK S +P YRK L Sbjct: 269 VFKTYMSISPLKYRKTL 285 >UniRef50_A9KSI4 Two component transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KSI4_CLOPH Length = 535 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 9/116 (7%) Query: 164 EQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQE------YLTRATQRYYGKT 217 +++I+D Q S + D +QF ++ + L S + Y + ++ G T Sbjct: 420 DKIIEDKRQ---SDTRPIRDAKQFIQTNYTRQITLDEVSGKVGFNATYFSSLFKKETGYT 476 Query: 218 PMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 ++ ++E+RIN AK+ L+ TNYSV I GYS F KTF K T+ P YRK Sbjct: 477 FLEYLSEVRINKAKELLKDTNYSVMAICEHVGYSDIKHFTKTFVKHTNLKPNEYRK 532 >UniRef50_Q7P089 Probable transcriptional regulatory protein n=1 Tax=Chromobacterium violaceum RepID=Q7P089_CHRVO Length = 295 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/78 (38%), Positives = 43/78 (55%) Query: 192 LENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 +E+ L+ +S R +R Y TP + I E +++ A + L NYSVTD A E GY Sbjct: 209 IEDYALLTGRSVSTFIRDFRRSYNTTPNRWIIEKKVDIAHQLLTAKNYSVTDAAAEVGYE 268 Query: 252 SPSLFIKTFKKLTSFTPK 269 + S FIK +K+ TPK Sbjct: 269 NTSHFIKVYKQRYGVTPK 286 >UniRef50_C2Z9K1 Transcriptional regulator, AraC n=2 Tax=Bacillus cereus RepID=C2Z9K1_BACCE Length = 416 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 47/86 (54%) Query: 187 FSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAF 246 + + L+++ L S YL+ ++ G + I R++ AKK L +TNYS+ DI+ Sbjct: 321 YDDIKLDHLAQLCHLSPNYLSSLFKKEVGTPLSEYIQRQRVDEAKKLLLLTNYSILDISM 380 Query: 247 EAGYSSPSLFIKTFKKLTSFTPKSYR 272 ++ S FIK FKK T TP+ +R Sbjct: 381 WLNFNDQSYFIKIFKKYTGLTPRQFR 406 >UniRef50_C4GA22 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GA22_9FIRM Length = 279 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 55/252 (21%), Positives = 115/252 (45%), Gaps = 11/252 (4%) Query: 33 TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFY--EFGATR 90 +E++ H H YYE + G ++ + E G+ + P S H S+ E A + Sbjct: 23 SENMMKSHYHTYYELYYLEEGCRLHAVSDQIYRTEAGEMILFPPYSMHHSYAPSEDQAFQ 82 Query: 91 ILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMV 150 + V +++ L L+ A +Y + + ++ + + ++ ++ ++ Sbjct: 83 RIVVYFTEKAIGD--LTLIEKMRHAGGLYHPDRRMSHQIHGLLGMMLMEQSETDDLHDIT 140 Query: 151 TFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMV--ALSAK---SQEY 205 ++ + + V P KS V K+ E S+ +E++ L+ + SQ Y Sbjct: 141 METILRAILLLLLKDVRTLNPTVNKSRVIKV--IEYISDHYMEDLRLDELAGRFYVSQYY 198 Query: 206 LTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTS 265 L R ++Y +T Q IN RI A++++ TN+ + +A G++S + F + F+ +T Sbjct: 199 LCREFKKYTSRTINQYINTTRILNAQREIMETNHPFSQVAANCGFASSTHFSRVFRSVTG 258 Query: 266 FTPKSYRKKLTE 277 TP ++RK ++ Sbjct: 259 MTPTAFRKSCSQ 270 >UniRef50_Q393N4 Transcriptional regulator, AraC family with amidase-like domain n=3 Tax=Burkholderia RepID=Q393N4_BURS3 Length = 330 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 36/132 (27%), Positives = 66/132 (50%), Gaps = 9/132 (6%) Query: 147 VEMVTFYVINRLRHY-REEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEY 205 V +F ++R+ H ++ I +W++ H +E FS + L + VA+S ++ Sbjct: 207 VSQDSFIELDRMGHRGHDDATIARAQRWMEK-----HLREPFSLARLSDHVAMSERT--- 258 Query: 206 LTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTS 265 L R + G P++ + +RI AK+ L T ++ I GY+ S F + FK+ T Sbjct: 259 LHRRFKDAVGAPPLRYLQTLRIEVAKRLLAETKLAIDTICERVGYADISGFRQLFKRETG 318 Query: 266 FTPKSYRKKLTE 277 +P YR++ T+ Sbjct: 319 ISPGEYRRRFTQ 330 >UniRef50_C6BZC3 Transcriptional regulator, AraC family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZC3_DESAD Length = 293 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 50/85 (58%) Query: 191 ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGY 250 +LE + LS +S R ++ + TP + I E R+++A++ L + S+T+I++E+GY Sbjct: 202 SLETVAELSGRSLSSFKREFKKTFNTTPARWIRERRMSWAEQLLRNSAKSITEISYESGY 261 Query: 251 SSPSLFIKTFKKLTSFTPKSYRKKL 275 S S F F+K TP+ YR +L Sbjct: 262 ESLSHFSTLFRKNYGVTPREYRAEL 286 >UniRef50_B9CPJ5 Putative transcriptional regulator n=1 Tax=Staphylococcus capitis SK14 RepID=B9CPJ5_STACP Length = 290 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 46/81 (56%) Query: 192 LENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 + ++ +S S + +RY G TP Q + R+ KQL++T+ +VT++A + G+S Sbjct: 207 MHDLCKISCISSSETIKLFKRYVGMTPFQYLLHYRLEKGAKQLKLTHNNVTEVAMDCGFS 266 Query: 252 SPSLFIKTFKKLTSFTPKSYR 272 + S FI+ FK TPK ++ Sbjct: 267 TTSYFIQMFKDKYKVTPKQFQ 287 >UniRef50_UPI0001788C4E two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788C4E Length = 538 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/115 (32%), Positives = 56/115 (48%), Gaps = 8/115 (6%) Query: 160 HYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPM 219 H ++ +I D+ Q+L+ + HD E +L+ + S+EY++R ++ +G T Sbjct: 429 HSKDNHIIHDIAQYLE---QHYHD-----EISLQQIAGKFFLSREYISRKFKQEFGVTLS 480 Query: 220 QIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 + IRI AK L + IA GY F K FKK+ FTP YRKK Sbjct: 481 DFLGRIRIEKAKTLLLNPQIRIAQIAEMVGYQDEKYFSKVFKKMEGFTPNEYRKK 535 >UniRef50_C5RQN6 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RQN6_CLOCL Length = 696 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 63/251 (25%), Positives = 115/251 (45%), Gaps = 17/251 (6%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISK 98 LH H+ E VL GR+F +I + L + I H+ + E IL I Sbjct: 26 LHWHNCLEILFVLKGRFFVQIESEIYELCEREIEIINADEPHRVYSEDEDNLILVFKIHL 85 Query: 99 RFFEQHYLPLLPYCFVASQV---------YRTNNAFLTYV--ETVISSLNLRETGLEEFV 147 FFE+++ + F + Y+ FL + E V + E E+ V Sbjct: 86 DFFEKYFNDVKNIYFYTNSSDEGIQEEDKYQELRKFLAILACEAVQQEEDYDEEVEEQLV 145 Query: 148 EMVTFYVINRLRH--YREEQVIDDVPQWLK--STVEKMHDKEQFSESALENMVALSAKSQ 203 +++ F+++N + Y EE I++ Q+ + + +HD ++ +L+++ + S Sbjct: 146 KLL-FHLLNNFHYLTYDEEVAIENQVQFQRYHRITKYIHDN-YMNKISLQDIASREFLSS 203 Query: 204 EYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKL 263 YL+ + G + +N R+N + K L ++ +++DI+ E G+S + K FK+L Sbjct: 204 YYLSHEIKNMAGTNFIDFLNTTRVNESIKFLLDSDKTISDISEEVGFSHTRYYNKYFKQL 263 Query: 264 TSFTPKSYRKK 274 + TP YRKK Sbjct: 264 YNITPLQYRKK 274 >UniRef50_UPI0001788D00 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788D00 Length = 291 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 64/262 (24%), Positives = 108/262 (41%), Gaps = 35/262 (13%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYE-----------FGA 88 H HD YE V G+ I K + + GD IP + H SF + F Sbjct: 33 HLHDLYELVYVYQGKGTFFIENKLMEKKEGDLFIIPGNTIHSSFPDPDQPIVSSALFFAP 92 Query: 89 TRILNVGISKRFFEQHYLPLLPYCFVASQ---VYR-----TNNAFL-TYVETVISSLNLR 139 + +L S + + CF +Q YR +N A++ ++ + + L Sbjct: 93 SLVLGANGSDLQYS------VLSCFEYAQKTGSYRHQLPESNQAYIEDMLKGISEEIRLA 146 Query: 140 ETGLEEFVEMVTFYVINRLRHY----REEQVIDD--VPQWLKSTVEKMHDKEQFSES-AL 192 + G E + + ++ + Y EQ P WL +++ +H E + L Sbjct: 147 QLGFREALVLQLRSLLLHINRYISTLSAEQTAHSQIGPAWLMDSIQWIH--EHLDQPIGL 204 Query: 193 ENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSS 252 + A +A + +R ++Y G ++ RI AK+ L SV IA GY++ Sbjct: 205 AALSAQAAVDPAHFSRMFKKYTGLHVTGYMHAKRIARAKELLRNHEASVGQIAEICGYAT 264 Query: 253 PSLFIKTFKKLTSFTPKSYRKK 274 + F + FKKLT TP +YR++ Sbjct: 265 LTHFHRNFKKLTGMTPGAYRRQ 286 >UniRef50_C4FY13 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FY13_9FIRM Length = 271 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 38/130 (29%), Positives = 71/130 (54%), Gaps = 4/130 (3%) Query: 148 EMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHD--KEQFSES-ALENMVALSAKSQE 204 +++ +I+ LRH E + D Q + ++ + + ++ +S+ LE + L ++ Sbjct: 135 KLIECVMIHLLRH-NELSIKDASLQAKHNEIDVLQNYIRKNYSKKITLEELSDLVDINKY 193 Query: 205 YLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLT 264 YL R ++ G +P+ + +R+ A+K L +N +V+DI+ G+ SPS F KTFK+ Sbjct: 194 YLIRLFKQQTGLSPIDYLIHVRLEEAEKLLAKSNITVSDISDRVGFHSPSHFSKTFKENN 253 Query: 265 SFTPKSYRKK 274 TP YRK+ Sbjct: 254 HCTPSQYRKR 263 >UniRef50_Q1VVA7 AraC-type DNA-binding domain-containing protein n=2 Tax=Flavobacteriaceae RepID=Q1VVA7_9FLAO Length = 306 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 26/84 (30%), Positives = 49/84 (58%) Query: 192 LENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 +E++ + S+ + ++ + G+TPM+ +N R+ AKK + T+ +++IAF G++ Sbjct: 221 VEDLADKACMSKSHFYKSFKNTLGETPMEYLNSERLKQAKKLIRTTSSKLSEIAFSTGFN 280 Query: 252 SPSLFIKTFKKLTSFTPKSYRKKL 275 S S F+ FKK TP +RK + Sbjct: 281 SSSYFVTQFKKQEGMTPSQFRKSI 304 >UniRef50_D2B8T9 AraC/XylS family transcriptional regulator n=4 Tax=Actinomycetales RepID=D2B8T9_STRRD Length = 255 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 5/115 (4%) Query: 168 DDVPQWLKSTVEKMHDK--EQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEI 225 D + Q + VE MHD +Q + +++M + S+ + +R QR G +P + ++ + Sbjct: 3 DVIEQAVLRVVESMHDNLGDQIT---IDDMARTAMFSKFHFSRVFQRVTGLSPGRFLSAV 59 Query: 226 RINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 R+ AK+ L T+ +VTDI+ GYSS F F +P YR+ T Q Sbjct: 60 RLREAKRLLTSTSLTVTDISHRVGYSSVGTFSSRFTSSVGVSPSKYRQLETVMPQ 114 >UniRef50_A9KKI7 Two component transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KKI7_CLOPH Length = 355 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 46/161 (28%), Positives = 73/161 (45%), Gaps = 4/161 (2%) Query: 111 YCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDV 170 +C + ++ L VE S RE L E +T + + L H R DV Sbjct: 188 FCCLLAEKLSLKTGCLIDVEPNFSMSAEREEILNETATFIT-QLRSDLLHKRSHTDYTDV 246 Query: 171 PQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFA 230 L +K ++ + L ++ A + S Y ++ + GKT Q EIRI+ A Sbjct: 247 ---LMGMAKKYLEEHYNQDIMLTDLAARTGFSTNYFSQIFKEKMGKTFAQFRTEIRIHKA 303 Query: 231 KKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSY 271 + L + ++TDIA E GY+ + FI+ FK++T TP Y Sbjct: 304 MELLNWSGKNITDIAMEVGYNDSTYFIRVFKEITGQTPSEY 344 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P17410 HTH-type transcriptional regulator chbR n=135 Ta... 368 e-101 UniRef50_D2TGS1 Chb operon repressor n=15 Tax=Enterobacteriaceae... 337 3e-91 UniRef50_C4X747 Negative transcriptional regulator of cel operon... 331 2e-89 UniRef50_C6D149 Transcriptional regulator, AraC family n=1 Tax=P... 192 8e-48 UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=P... 192 2e-47 UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dict... 190 5e-47 UniRef50_A8SCU0 Putative uncharacterized protein n=1 Tax=Faecali... 190 5e-47 UniRef50_Q7UYE3 L-rhamnose operon transcriptional activator n=1 ... 189 8e-47 UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=C... 188 2e-46 UniRef50_B7DQ49 Transcriptional regulator, AraC family n=1 Tax=A... 186 8e-46 UniRef50_C0EGN7 Putative uncharacterized protein n=1 Tax=Clostri... 185 1e-45 UniRef50_C0EDH7 Putative uncharacterized protein n=1 Tax=Clostri... 185 1e-45 UniRef50_C0EGI4 Putative uncharacterized protein n=1 Tax=Clostri... 185 2e-45 UniRef50_C9LA22 Transcriptional regulator, AraC family n=2 Tax=C... 185 2e-45 UniRef50_C5RE92 Transcriptional regulator, AraC family n=3 Tax=C... 183 5e-45 UniRef50_A7VQ18 Putative uncharacterized protein n=1 Tax=Clostri... 182 8e-45 UniRef50_C0EDW5 Putative uncharacterized protein n=1 Tax=Clostri... 182 1e-44 UniRef50_C0EDI6 Putative uncharacterized protein n=2 Tax=Clostri... 181 3e-44 UniRef50_C0EIL7 Putative uncharacterized protein n=1 Tax=Clostri... 180 3e-44 UniRef50_C7H4U6 Transcriptional regulator, AraC family n=1 Tax=F... 180 3e-44 UniRef50_Q0TS97 Transcriptional regulator, AraC family n=6 Tax=C... 180 6e-44 UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostri... 180 6e-44 UniRef50_C0ABA0 L-rhamnose operon transcriptional activator n=1 ... 177 3e-43 UniRef50_A0AET6 Complete genome n=16 Tax=Listeria RepID=A0AET6_L... 176 6e-43 UniRef50_UPI0001C356F7 AraC family transcriptional regulator n=1... 176 6e-43 UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacte... 176 8e-43 UniRef50_A8RL67 Putative uncharacterized protein n=1 Tax=Clostri... 176 1e-42 UniRef50_C6J3J7 Transcriptional regulator n=1 Tax=Paenibacillus ... 176 1e-42 UniRef50_C0EG54 Putative uncharacterized protein n=1 Tax=Clostri... 175 1e-42 UniRef50_Q9KBM0 Transcriptional regulator (AraC/XylS family) n=1... 175 2e-42 UniRef50_A6LR84 Transcriptional regulator, AraC family n=2 Tax=C... 175 2e-42 UniRef50_A5N4U3 Predicted transcriptional regulator n=2 Tax=Clos... 174 3e-42 UniRef50_C3RLG7 Transcriptional regulator n=2 Tax=Bacteria RepID... 173 5e-42 UniRef50_C6L914 Transcriptional regulator, AraC family n=1 Tax=B... 173 6e-42 UniRef50_C6D083 Transcriptional regulator, AraC family n=1 Tax=P... 172 1e-41 UniRef50_C0ECN2 Putative uncharacterized protein n=1 Tax=Clostri... 172 1e-41 UniRef50_B4AEM1 Transcriptional regulator n=1 Tax=Bacillus pumil... 172 1e-41 UniRef50_C0EGR3 Putative uncharacterized protein n=1 Tax=Clostri... 172 1e-41 UniRef50_C9L4N0 Putative transcriptional regulator n=1 Tax=Blaut... 172 1e-41 UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 T... 172 1e-41 UniRef50_C1I2I2 Transcriptional regulator n=1 Tax=Clostridium sp... 172 1e-41 UniRef50_C6LHD5 Putative transcriptional regulator YfiF n=1 Tax=... 171 2e-41 UniRef50_C9KMM0 Putative AraC-type DNA-binding domain-containing... 171 3e-41 UniRef50_A9KRL7 Transcriptional regulator, AraC family n=1 Tax=C... 170 3e-41 UniRef50_C6JCU7 Transcriptional regulator n=3 Tax=Ruminococcus R... 170 3e-41 UniRef50_C6D8V3 Transcriptional regulator, AraC family n=1 Tax=P... 170 3e-41 UniRef50_B1R0P6 Transcriptional regulator, AraC family protein n... 170 4e-41 UniRef50_UPI0001788F57 transcriptional regulator, AraC family n=... 170 4e-41 UniRef50_C4GA22 Putative uncharacterized protein n=1 Tax=Shuttle... 170 4e-41 UniRef50_B6FM02 Putative uncharacterized protein n=2 Tax=Clostri... 170 5e-41 UniRef50_A5GD53 Transcriptional regulator, AraC family n=1 Tax=G... 170 6e-41 UniRef50_C5ET70 Putative uncharacterized protein n=1 Tax=Clostri... 170 7e-41 UniRef50_A8SGH8 Putative uncharacterized protein n=2 Tax=Bacteri... 169 7e-41 UniRef50_B1HRT8 Hypothetical transcriptional regulator (AraC/Xyl... 169 8e-41 UniRef50_Q5WL10 AraC/XylS family transcriptional regulator n=1 T... 169 9e-41 UniRef50_Q5WCU1 AraC/XylS family transcriptional regulator n=1 T... 169 1e-40 UniRef50_UPI0001C35241 AraC family transcriptional regulator n=1... 168 1e-40 UniRef50_D1N597 Transcriptional regulator, AraC family n=1 Tax=V... 168 1e-40 UniRef50_C6JD68 Transcriptional regulator n=1 Tax=Ruminococcus s... 168 1e-40 UniRef50_C6D8E9 Transcriptional regulator, AraC family n=1 Tax=P... 168 2e-40 UniRef50_C7H5Z6 Transcription regulator, AraC family n=2 Tax=Rum... 168 2e-40 UniRef50_C0EGG6 Putative uncharacterized protein n=1 Tax=Clostri... 168 2e-40 UniRef50_C9KMM6 Putative AraC-type DNA-binding domain-containing... 168 2e-40 UniRef50_B6FJS0 Putative uncharacterized protein n=2 Tax=Clostri... 167 3e-40 UniRef50_C6J8U5 Putative uncharacterized protein n=1 Tax=Ruminoc... 167 3e-40 UniRef50_C0EDY4 Putative uncharacterized protein n=1 Tax=Clostri... 167 4e-40 UniRef50_Q5WIZ4 Putative uncharacterized protein n=1 Tax=Bacillu... 167 4e-40 UniRef50_B2TM72 AraC-family transcriptional regulator n=3 Tax=Cl... 167 4e-40 UniRef50_B5JHR7 Transcriptional regulator, AraC family protein n... 167 5e-40 UniRef50_UPI0001BC4191 helix-turn-helix domain-containing protei... 166 7e-40 UniRef50_C4Z7U7 LacI family transcriptional regulator n=1 Tax=Eu... 166 8e-40 UniRef50_Q28QP5 Transcriptional regulator, AraC family n=1 Tax=J... 166 8e-40 UniRef50_C6J044 Transcriptional regulator n=1 Tax=Paenibacillus ... 166 8e-40 UniRef50_C0CUZ1 Putative uncharacterized protein n=1 Tax=Clostri... 166 9e-40 UniRef50_A4EK09 Transcriptional regulator, AraC family protein n... 166 9e-40 UniRef50_C8NIW5 AraC family transcriptional regulator n=2 Tax=Gr... 165 1e-39 UniRef50_C7IFZ3 Transcriptional regulator, AraC family n=1 Tax=C... 165 1e-39 UniRef50_C4ZFS6 Two-component response regulator n=4 Tax=Clostri... 165 1e-39 UniRef50_A7VU88 Putative uncharacterized protein n=1 Tax=Clostri... 165 2e-39 UniRef50_C6JFK6 Transcriptional regulator n=1 Tax=Ruminococcus s... 165 2e-39 UniRef50_C0X5H9 AraC family transcriptional regulator n=22 Tax=E... 165 2e-39 UniRef50_Q5WL40 AraC/XylS family transcriptional regulator n=1 T... 165 2e-39 UniRef50_C0FP55 Putative uncharacterized protein n=1 Tax=Rosebur... 165 2e-39 UniRef50_C0EDI9 Putative uncharacterized protein n=1 Tax=Clostri... 165 2e-39 UniRef50_C6L8V9 Transcriptional regulator, AraC family n=1 Tax=B... 164 3e-39 UniRef50_B1QXT7 Transcriptional regulator, AraC family n=3 Tax=C... 164 3e-39 UniRef50_C0E8H9 Putative uncharacterized protein n=1 Tax=Clostri... 164 3e-39 UniRef50_C0FW59 Putative uncharacterized protein n=2 Tax=Clostri... 164 3e-39 UniRef50_C5RYV2 AraC family transcriptional regulator n=1 Tax=Ac... 164 3e-39 UniRef50_UPI0001BC2F1F 2-isopropylmalate synthase n=1 Tax=Butyri... 164 3e-39 UniRef50_Q65MB5 Probable transcriptional regulator n=1 Tax=Bacil... 164 3e-39 UniRef50_C0CH60 Putative uncharacterized protein n=1 Tax=Blautia... 163 4e-39 UniRef50_D1N7W9 Transcriptional regulator, AraC family n=1 Tax=V... 163 5e-39 UniRef50_A6TKQ3 Helix-turn-helix-domain containing protein, AraC... 163 7e-39 UniRef50_C0E9Q1 Putative uncharacterized protein n=1 Tax=Clostri... 163 7e-39 UniRef50_A8S1Q1 Putative uncharacterized protein n=3 Tax=Clostri... 163 7e-39 UniRef50_A5ZUG1 Putative uncharacterized protein n=1 Tax=Ruminoc... 163 9e-39 UniRef50_C7GFI0 Transcriptional regulator, AraC family n=2 Tax=C... 162 9e-39 UniRef50_A7VID9 Putative uncharacterized protein n=4 Tax=Clostri... 162 9e-39 UniRef50_C6PBN1 Transcriptional regulator, AraC family n=1 Tax=T... 162 1e-38 UniRef50_C6D720 Transcriptional regulator, AraC family n=2 Tax=B... 162 1e-38 UniRef50_C7G9X0 Transcriptional regulator, AraC family n=3 Tax=L... 162 2e-38 UniRef50_C0EAQ5 Putative uncharacterized protein n=1 Tax=Clostri... 161 2e-38 UniRef50_C9KN97 Putative AraC-type DNA-binding domain-containing... 161 2e-38 UniRef50_C6JJH4 Putative uncharacterized protein n=1 Tax=Fusobac... 161 2e-38 UniRef50_C9LCE8 Transcriptional regulator, AraC family n=1 Tax=B... 161 2e-38 UniRef50_C0EIV3 Putative uncharacterized protein n=1 Tax=Clostri... 161 2e-38 UniRef50_B7CB27 Putative uncharacterized protein n=1 Tax=Eubacte... 161 3e-38 UniRef50_UPI0001788D00 transcriptional regulator, AraC family n=... 161 3e-38 UniRef50_Q187Y6 AraC-family transcriptional regulator n=7 Tax=Cl... 161 3e-38 UniRef50_C6JJY6 Transcription regulator n=1 Tax=Fusobacterium va... 161 3e-38 UniRef50_C1I9Z9 AraC family transcriptional regulator n=1 Tax=Cl... 160 3e-38 UniRef50_A4CQ66 Activator protein MtlR n=10 Tax=Bacteroidetes Re... 160 4e-38 UniRef50_B0MEI4 Putative uncharacterized protein n=1 Tax=Anaeros... 160 5e-38 UniRef50_B1R1K3 Transcriptional regulator, AraC family n=2 Tax=C... 160 5e-38 UniRef50_C6J998 Putative uncharacterized protein n=1 Tax=Ruminoc... 160 5e-38 UniRef50_C0EHT5 Putative uncharacterized protein n=1 Tax=Clostri... 160 5e-38 UniRef50_C4G7L2 Putative uncharacterized protein n=1 Tax=Abiotro... 160 6e-38 UniRef50_P96660 Uncharacterized HTH-type transcriptional regulat... 160 7e-38 UniRef50_C0WDW3 Predicted protein n=2 Tax=Acidaminococcus sp. D2... 159 8e-38 UniRef50_C6JCM1 Putative uncharacterized protein n=1 Tax=Ruminoc... 159 8e-38 UniRef50_C6W740 Transcriptional regulator, AraC family n=1 Tax=D... 159 8e-38 UniRef50_D1N6W7 Transcriptional regulator, AraC family n=1 Tax=V... 159 1e-37 UniRef50_C7H3E2 Transcriptional regulator, AraC family n=4 Tax=C... 158 1e-37 UniRef50_C6D0B3 Transcriptional regulator, AraC family n=1 Tax=P... 158 1e-37 UniRef50_C7GHR9 Transcriptional regulator, AraC family n=2 Tax=L... 158 1e-37 UniRef50_C6PNM8 Transcriptional regulator, AraC family n=1 Tax=C... 158 2e-37 UniRef50_A6LH31 Transcriptional regulator n=5 Tax=Bacteroidales ... 158 2e-37 UniRef50_B0P341 Putative uncharacterized protein n=9 Tax=Clostri... 158 2e-37 UniRef50_UPI0001789626 transcriptional regulator, AraC family n=... 158 2e-37 UniRef50_Q0SZ95 HTH-type transcriptional activator rhaS n=93 Tax... 157 3e-37 UniRef50_C6IIU9 Transcriptional regulator n=2 Tax=Bacteroides Re... 157 4e-37 UniRef50_C4ZHR1 Xylan 1,4-beta-xylosidase n=1 Tax=Eubacterium re... 157 4e-37 UniRef50_C0EGL1 Putative uncharacterized protein n=1 Tax=Clostri... 157 5e-37 UniRef50_C9RVZ3 Two component transcriptional regulator, AraC fa... 156 7e-37 UniRef50_UPI0001787F16 transcriptional regulator, AraC family n=... 156 7e-37 UniRef50_A8S1P5 Putative uncharacterized protein n=2 Tax=Clostri... 156 8e-37 UniRef50_A7AA81 Putative uncharacterized protein n=1 Tax=Parabac... 156 1e-36 UniRef50_A8SS52 Putative uncharacterized protein n=1 Tax=Coproco... 155 1e-36 UniRef50_C6D5P5 Transcriptional regulator, AraC family n=1 Tax=P... 155 1e-36 UniRef50_C6D4D7 Transcriptional regulator, AraC family n=3 Tax=F... 155 2e-36 UniRef50_C6LL87 Transcriptional regulator, AraC family n=1 Tax=B... 155 2e-36 UniRef50_Q5WI14 AraC/XylS family transcriptional regulator n=1 T... 155 2e-36 UniRef50_C4FXH3 Putative uncharacterized protein n=1 Tax=Catonel... 155 2e-36 UniRef50_C0FPB8 Putative uncharacterized protein n=1 Tax=Rosebur... 155 2e-36 UniRef50_D2MNX8 Transcriptional regulator, AraC family n=1 Tax=B... 155 2e-36 UniRef50_A7B0C8 Putative uncharacterized protein n=1 Tax=Ruminoc... 155 2e-36 UniRef50_UPI0001C3636B helix-turn-helix domain-containing protei... 154 3e-36 UniRef50_C5RQN6 Transcriptional regulator, AraC family n=1 Tax=C... 154 3e-36 UniRef50_A7B0Y7 Putative uncharacterized protein n=1 Tax=Ruminoc... 154 3e-36 UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=C... 154 3e-36 UniRef50_A9KIW0 Transcriptional regulator, AraC family n=1 Tax=C... 154 4e-36 UniRef50_C9A3T9 Transcriptional regulator n=1 Tax=Enterococcus g... 153 4e-36 UniRef50_C7G9P1 AraC-type sugar metabolism regulator n=2 Tax=Lac... 153 5e-36 UniRef50_A8RPB8 Putative uncharacterized protein n=1 Tax=Clostri... 153 5e-36 Sequences not found previously or not previously below threshold: UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligr... 191 2e-47 UniRef50_UPI0001788255 transcriptional regulator, AraC family n=... 185 1e-45 UniRef50_C6IZN9 AraC family transcriptional regulator n=1 Tax=Pa... 184 3e-45 UniRef50_UPI0001789C33 transcriptional regulator, AraC family n=... 178 2e-43 UniRef50_C6LDM6 Transcriptional regulator, AraC family n=1 Tax=B... 177 4e-43 UniRef50_C6LDG4 Transcriptional regulator, AraC family n=3 Tax=C... 176 7e-43 UniRef50_A8S9Z6 Putative uncharacterized protein n=1 Tax=Faecali... 176 1e-42 UniRef50_C8WV57 Transcriptional regulator, AraC family n=2 Tax=A... 175 1e-42 UniRef50_C6D3A6 Transcriptional regulator, AraC family n=1 Tax=P... 173 4e-42 UniRef50_C5EQL5 Transcriptional regulator n=1 Tax=Clostridiales ... 172 1e-41 UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostri... 172 1e-41 UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostri... 172 2e-41 UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacte... 171 2e-41 UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1... 170 3e-41 UniRef50_UPI0001788C0B transcriptional regulator, AraC family n=... 170 7e-41 UniRef50_C0EIX6 Putative uncharacterized protein n=1 Tax=Clostri... 169 8e-41 UniRef50_B0MH78 Putative uncharacterized protein n=1 Tax=Anaeros... 169 8e-41 UniRef50_UPI000178921D transcriptional regulator, AraC family n=... 168 1e-40 UniRef50_A7B0D2 Putative uncharacterized protein n=1 Tax=Ruminoc... 168 1e-40 UniRef50_C7IIE8 Transcriptional regulator, AraC family n=1 Tax=C... 167 4e-40 UniRef50_C6D359 Transcriptional regulator, AraC family n=2 Tax=B... 167 5e-40 UniRef50_C6J7Z0 Helix-turn-helix domain-containing protein n=1 T... 166 8e-40 UniRef50_A6LYY5 Helix-turn-helix-domain containing protein, AraC... 166 1e-39 UniRef50_C0EIY9 Putative uncharacterized protein n=1 Tax=Clostri... 165 1e-39 UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostri... 165 1e-39 UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnos... 165 2e-39 UniRef50_B0AA61 Putative uncharacterized protein n=1 Tax=Clostri... 164 3e-39 UniRef50_A8SQN1 Putative uncharacterized protein n=2 Tax=Clostri... 164 3e-39 UniRef50_C0C2H5 Putative uncharacterized protein n=1 Tax=Clostri... 164 3e-39 UniRef50_UPI0001789C32 transcriptional regulator, AraC family n=... 164 3e-39 UniRef50_A5I5L7 AraC-family transcriptional regulator n=10 Tax=C... 164 3e-39 UniRef50_B6FJC5 Putative uncharacterized protein n=1 Tax=Clostri... 164 3e-39 UniRef50_C6D710 Transcriptional regulator, AraC family n=1 Tax=P... 163 6e-39 UniRef50_C6D3L6 Transcriptional regulator, AraC family n=1 Tax=P... 163 6e-39 UniRef50_A8SQD4 Putative uncharacterized protein n=2 Tax=Coproco... 163 6e-39 UniRef50_C5EE80 Helix-turn-helix domain-containing protein n=1 T... 163 6e-39 UniRef50_C0EGE3 Putative uncharacterized protein n=2 Tax=Clostri... 163 6e-39 UniRef50_B7AP83 Putative uncharacterized protein n=1 Tax=Bactero... 163 7e-39 UniRef50_B5CQG2 Putative uncharacterized protein n=1 Tax=Ruminoc... 163 7e-39 UniRef50_C5RKC4 Transcriptional regulator, AraC family n=1 Tax=C... 163 8e-39 UniRef50_C6D3L4 Transcriptional regulator, AraC family n=1 Tax=P... 163 8e-39 UniRef50_UPI000178AA6A transcriptional regulator, AraC family n=... 162 9e-39 UniRef50_C0ECP2 Putative uncharacterized protein n=1 Tax=Clostri... 162 1e-38 UniRef50_C3X327 AraC family transcriptional regulator n=1 Tax=Ox... 162 1e-38 UniRef50_A9KLS8 Transcriptional regulator, AraC family n=1 Tax=C... 162 1e-38 UniRef50_C7G755 Transcriptional regulator, AraC family n=1 Tax=R... 162 2e-38 UniRef50_D1NB22 Transcriptional regulator, AraC family n=1 Tax=V... 161 2e-38 UniRef50_C9AXT8 Putative uncharacterized protein n=2 Tax=Enteroc... 161 2e-38 UniRef50_UPI0001C3766F two-component response regulator n=2 Tax=... 160 4e-38 UniRef50_C7GHF4 Transcriptional regulator, AraC family n=1 Tax=R... 160 5e-38 UniRef50_A8RTE5 Putative uncharacterized protein n=2 Tax=Clostri... 160 5e-38 UniRef50_B6VVW1 Putative uncharacterized protein n=2 Tax=Bactero... 160 5e-38 UniRef50_C0EDX0 Putative uncharacterized protein n=1 Tax=Clostri... 160 6e-38 UniRef50_B0MR68 Putative uncharacterized protein n=1 Tax=Eubacte... 160 6e-38 UniRef50_Q0ST06 Transcriptional regulator, AraC family n=13 Tax=... 160 7e-38 UniRef50_UPI00017894C2 transcriptional regulator, AraC family n=... 159 8e-38 UniRef50_A8MEF5 Transcriptional regulator, AraC family n=1 Tax=A... 159 1e-37 UniRef50_C9A5Y7 Putative uncharacterized protein n=3 Tax=Enteroc... 159 1e-37 UniRef50_C6LH72 Transcriptional regulator, AraC family n=1 Tax=B... 158 1e-37 UniRef50_C6CV13 Transcriptional regulator, AraC family n=1 Tax=P... 158 1e-37 UniRef50_A6M2W7 Helix-turn-helix-domain containing protein, AraC... 158 1e-37 UniRef50_C6D193 Transcriptional regulator, AraC family n=2 Tax=B... 158 2e-37 UniRef50_C3R936 Transcriptional regulator n=2 Tax=Bacteroidales ... 158 2e-37 UniRef50_C9Y4M3 HTH-type transcriptional activator rhaS n=2 Tax=... 158 2e-37 UniRef50_UPI0001C3660E AraC family transcriptional regulator n=1... 158 2e-37 UniRef50_C0EIE9 Putative uncharacterized protein n=1 Tax=Clostri... 158 2e-37 UniRef50_C0EBM6 Putative uncharacterized protein n=1 Tax=Clostri... 157 3e-37 UniRef50_C0EIK7 Putative uncharacterized protein n=1 Tax=Clostri... 157 3e-37 UniRef50_C0EGG3 Putative uncharacterized protein n=1 Tax=Clostri... 157 3e-37 UniRef50_C5RI71 Transcriptional regulator, AraC family n=1 Tax=C... 157 3e-37 UniRef50_C8P2X0 Putative uncharacterized protein n=1 Tax=Erysipe... 157 4e-37 UniRef50_B0A7K6 Putative uncharacterized protein n=1 Tax=Clostri... 157 4e-37 UniRef50_B7MQA3 Putative AraC-type DNA-binding domain-containing... 157 5e-37 UniRef50_C0EAY1 Putative uncharacterized protein n=1 Tax=Clostri... 157 6e-37 UniRef50_B0M9M5 Putative uncharacterized protein n=1 Tax=Anaeros... 157 6e-37 UniRef50_C6D477 Transcriptional regulator, AraC family n=1 Tax=P... 156 6e-37 UniRef50_C0EDG4 Putative uncharacterized protein n=1 Tax=Clostri... 156 6e-37 UniRef50_C5RE27 Transcriptional regulator, AraC family n=1 Tax=C... 156 7e-37 UniRef50_A5ZHU6 Putative uncharacterized protein n=1 Tax=Bactero... 156 9e-37 UniRef50_C0D5Z0 Putative uncharacterized protein n=1 Tax=Clostri... 156 1e-36 UniRef50_C9LQ90 Putative transcriptional regulator n=1 Tax=Diali... 155 1e-36 UniRef50_A6BIB0 Putative uncharacterized protein n=1 Tax=Dorea l... 155 1e-36 UniRef50_A6LYV7 Helix-turn-helix-domain containing protein, AraC... 154 2e-36 UniRef50_C0ECP6 Putative uncharacterized protein n=1 Tax=Clostri... 154 3e-36 UniRef50_UPI0001788B1F transcriptional regulator, AraC family n=... 154 3e-36 UniRef50_C4G478 Putative uncharacterized protein n=1 Tax=Abiotro... 154 4e-36 UniRef50_D1N6W3 Transcriptional regulator, AraC family n=1 Tax=V... 153 4e-36 UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryan... 153 4e-36 UniRef50_A8RST4 Putative uncharacterized protein n=3 Tax=Clostri... 153 4e-36 UniRef50_C6CVW1 Transcriptional regulator, AraC family n=2 Tax=B... 153 5e-36 UniRef50_C5RJE9 Transcriptional regulator, AraC family n=1 Tax=C... 153 5e-36 UniRef50_Q9S309 Putative AraC-type Regulator n=1 Tax=Ruminococcu... 153 5e-36 UniRef50_C9B1F2 Transcriptional regulator n=4 Tax=Enterococcus R... 153 6e-36 UniRef50_UPI0001C36B6C helix-turn-helix domain-containing protei... 153 6e-36 UniRef50_A6BF68 Putative uncharacterized protein n=1 Tax=Dorea l... 153 6e-36 >UniRef50_P17410 HTH-type transcriptional regulator chbR n=135 Tax=Enterobacteriaceae RepID=CHBR_ECOLI Length = 280 Score = 368 bits (946), Expect = e-101, Method: Composition-based stats. Identities = 279/280 (99%), Positives = 279/280 (99%) Query: 1 MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEIN 60 MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEIN Sbjct: 1 MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEIN 60 Query: 61 GKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYR 120 GKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYR Sbjct: 61 GKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYR 120 Query: 121 TNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEK 180 TNNAFLTYVETVISSLN RETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEK Sbjct: 121 TNNAFLTYVETVISSLNFRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEK 180 Query: 181 MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYS 240 MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYS Sbjct: 181 MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYS 240 Query: 241 VTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 VTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ Sbjct: 241 VTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 >UniRef50_D2TGS1 Chb operon repressor n=15 Tax=Enterobacteriaceae RepID=D2TGS1_CITRO Length = 282 Score = 337 bits (864), Expect = 3e-91, Method: Composition-based stats. Identities = 241/279 (86%), Positives = 261/279 (93%) Query: 2 MQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEING 61 +Q APEI A EQQLFNGKNFHVFIYNKTES GLHQHDYYEFTLVLTGRY+QEING Sbjct: 4 LQATATAPEITVAHEQQLFNGKNFHVFIYNKTESACGLHQHDYYEFTLVLTGRYYQEING 63 Query: 62 KRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRT 121 KRVLLERGDFVFIPLGSHHQSFYEFG+TRILNVGISK FFEQHY PL+PYCFVASQVYR Sbjct: 64 KRVLLERGDFVFIPLGSHHQSFYEFGSTRILNVGISKHFFEQHYSPLMPYCFVASQVYRI 123 Query: 122 NNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM 181 N+AFLTYVETV++SLN R+TGLEEFVE+VTFY+INRLRHYREEQV DD+PQWLK+TVE M Sbjct: 124 NSAFLTYVETVVASLNFRDTGLEEFVEVVTFYIINRLRHYREEQVPDDIPQWLKATVETM 183 Query: 182 HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSV 241 H+KEQF E+ALENM+ALSAKSQEYLTRATQRYY KTPMQ+INEIRINFAKKQLEMTNYSV Sbjct: 184 HNKEQFGENALENMIALSAKSQEYLTRATQRYYRKTPMQLINEIRINFAKKQLEMTNYSV 243 Query: 242 TDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 TDIAFEAGYSSPSLFIKTFKK+TSFTP SYRKKLT+++Q Sbjct: 244 TDIAFEAGYSSPSLFIKTFKKMTSFTPNSYRKKLTQYSQ 282 >UniRef50_C4X747 Negative transcriptional regulator of cel operon n=8 Tax=Enterobacteriaceae RepID=C4X747_KLEPN Length = 279 Score = 331 bits (849), Expect = 2e-89, Method: Composition-based stats. Identities = 227/279 (81%), Positives = 250/279 (89%) Query: 1 MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEIN 60 M QP + EI+TAREQQLFNGKNFHV IYNKTES+SGLHQHDYYEFT+VLTGRY+QEIN Sbjct: 1 MRQPRMMTTEISTAREQQLFNGKNFHVVIYNKTESVSGLHQHDYYEFTVVLTGRYYQEIN 60 Query: 61 GKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYR 120 GKRVLLERGDFVFIP+GSHHQSFYEFGATRILNVGIS+RFFE+HYLPLLP+ VASQVY Sbjct: 61 GKRVLLERGDFVFIPMGSHHQSFYEFGATRILNVGISRRFFEKHYLPLLPFGLVASQVYA 120 Query: 121 TNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEK 180 +AFL YVE+VI+SLN RET +EF+E+V+FYVINRLRHYREE V D PQWLK+TVE Sbjct: 121 VQSAFLGYVESVIASLNFRETEFDEFIELVSFYVINRLRHYREEPVADVTPQWLKNTVEA 180 Query: 181 MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYS 240 MHDK +F E ALENMV LS K+QEYLTRATQRYYGKTPMQIIN+IRINFAKKQLE+TNYS Sbjct: 181 MHDKLKFGEGALENMVRLSGKTQEYLTRATQRYYGKTPMQIINDIRINFAKKQLEITNYS 240 Query: 241 VTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFN 279 VTDIA+E+GYSSPSLFIKTFKKLTSFTP SYRK LT N Sbjct: 241 VTDIAYESGYSSPSLFIKTFKKLTSFTPSSYRKHLTSIN 279 >UniRef50_C6D149 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D149_PAESJ Length = 279 Score = 192 bits (489), Expect = 8e-48, Method: Composition-based stats. Identities = 74/280 (26%), Positives = 115/280 (41%), Gaps = 15/280 (5%) Query: 6 INAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVL 65 +N P + A NFH+ + LH HD+YE +V++G+ +NG L Sbjct: 1 MNVPMLYAAALIDPLVQSNFHIV--HSVRHAYPLHGHDFYEIFIVISGQCTHLVNGDTQL 58 Query: 66 LERGDFVFIPLGSHH-QSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNA 124 L G VFI H E G R LNV K E + + F + Sbjct: 59 LREGAMVFIRPDDTHSYDLLEGGDCRFLNVNFYKEVVEGAFDYIGHAAFAQALRSPQLPP 118 Query: 125 FLTYVETVISSLNLRETGLEEFVE--------MVTFYVINRLRHYREEQVID---DVPQW 173 F+ T + +L + ++ F M ++ + L H+ E D +PQW Sbjct: 119 FIMLPGTDMEALMRKSEQIQLFNSTDKQKARTMARSFLSDALTHFFLEFRNDGTQAMPQW 178 Query: 174 LKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQ 233 + ++ KE FS + L + L+ +S +L R ++Y TP +N +R+ AK Sbjct: 179 FDHLLAQLQRKENFS-AGLPRLRELTDRSDGHLNRVFKQYLRMTPTAYLNHLRLGHAKNL 237 Query: 234 LEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 L T + DIA+EAG+ + S F FK P R Sbjct: 238 LLTTQLPIVDIAYEAGFDNLSHFYHLFKDAYGIAPGKIRN 277 >UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTF5_PAESJ Length = 294 Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 58/287 (20%), Positives = 114/287 (39%), Gaps = 25/287 (8%) Query: 14 AREQQLFNGKNFHVFIYNKT----ESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 +E + + V +Y T + LH HD E LV G ++ + L+ G Sbjct: 6 LKEARKHGNPIYPVSLYEITCPSDAPLLDLHWHDELELLLVTEGTAVFRVDLQDYELQAG 65 Query: 70 DFVFIPLGSHHQSFYEFGATRIL--NVGISKRF--------FEQHYLPLLPYCFVASQVY 119 + +F+ G H + G V S F F+++ P+L + Sbjct: 66 EAIFVNSGELHSGYVVGGKPCSFDAVVFHSSLFSSGSIDYLFDRYISPVLEKRYEVPAHL 125 Query: 120 R----TNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQ--- 172 R L ++ + + E ++ + F ++ +L + V Q Sbjct: 126 RREPGPGMELLAMLDQIFEVHRNEQAASELTIKGLLFSILAKLVSLGKPSVRVKPEQEGY 185 Query: 173 ---WLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINF 229 LK+ +E + ++ L+ + L+ S+ Y R +R K+P++ +N R+ Sbjct: 186 RIERLKTVIEYI-EQNYAEPIPLQKLAELARMSESYFCRFFKRITTKSPIEYMNSYRVQQ 244 Query: 230 AKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 A +L T+ + ++A + G++S S F F++ TP+ YR +L Sbjct: 245 AASRLRQTDAKIMEVALDVGFNSLSYFNTVFRQRFGCTPREYRSRLQ 291 >UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIK0_9FIRM Length = 615 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 50/244 (20%), Positives = 106/244 (43%), Gaps = 10/244 (4%) Query: 33 TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG-ATRI 91 +++ H H+++E + GR I + +L+ +F+ P H SF E R Sbjct: 24 NDNMVRSHYHEFFEIYYLEQGRRQHIIEDSQYILQPDEFIIFPPFVMHHSFEENDVPFRR 83 Query: 92 LNVGISKRFFEQHYLPLLPYCFVASQVYRTNNA----FLTYVETVISSLNLRETGLEEFV 147 L + + +L ++VY+ A ++ ++ + E + Sbjct: 84 LLLYFNPEVIRS--PQILRTLSERARVYKLPRAQSAPIYNLMKDILQEQERDDLYSRELI 141 Query: 148 EMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSE-SALENMVALSAKSQEYL 206 ++ + +L +E + + + +H E F+E LE + SQ +L Sbjct: 142 TLMVNALALQLVRNSDEAARPEQRNRVTDIINYLH--EHFTEDITLEQLANHFYVSQYHL 199 Query: 207 TRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSF 266 R +RY T +Q I+ +R+ A++ L+ ++YS+T+I+ G+S+ + F + +K +T Sbjct: 200 CREFKRYTSSTIVQYIHNLRVLHAQRLLQESDYSITEISKRVGFSNVTHFNRVYKSVTGM 259 Query: 267 TPKS 270 +P Sbjct: 260 SPSQ 263 >UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dictyoglomus RepID=B5YFJ6_DICT6 Length = 287 Score = 190 bits (483), Expect = 5e-47, Method: Composition-based stats. Identities = 56/273 (20%), Positives = 113/273 (41%), Gaps = 20/273 (7%) Query: 20 FNGKNFHVFIYNK----TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIP 75 +F +F++ + H H+ +E + G ++G L G+++F+ Sbjct: 15 HGTPDFPLFVHEDIFVYRNGVVNPHWHNEFEILYMERGIGKFYVDGYEYKLNEGEYLFVN 74 Query: 76 LGSHHQSFYEFGATRILNVGISKRFF---------EQHYLPLLPYCFVASQVYRTNNAFL 126 GS H + + R +++LPL+ + + Sbjct: 75 SGSIHSGLEMIKRSIGYAIVFDLRLLYSEEPDYCKHEYFLPLINKRYHIPSN-LNDEHIR 133 Query: 127 TYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDD-----VPQWLKSTVEKM 181 + +I + G E +++ + F + R+ Y E+ D + +K + + Sbjct: 134 NDICRIIEVFKEKSYGYELYIKSLLFDIFWRVFKYYAERRNQDGRLGYKIERIKDVLNYI 193 Query: 182 HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSV 241 + +L+ + S+ YL R + +P++ IN++R++ A + L T+ SV Sbjct: 194 NQNYN-KNLSLDELSRQVDMSKFYLCRLFKESLRMSPVEYINKVRVDKAMELLINTDMSV 252 Query: 242 TDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 ++IAFE G+ + S FIK FKK TP +RK+ Sbjct: 253 SEIAFECGFDNISYFIKVFKKYMHTTPLKFRKQ 285 >UniRef50_A8SCU0 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SCU0_9FIRM Length = 310 Score = 190 bits (483), Expect = 5e-47, Method: Composition-based stats. Identities = 66/287 (22%), Positives = 115/287 (40%), Gaps = 27/287 (9%) Query: 12 ATAREQQLFNGKNFHVFIYNKTESISG--LHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 A REQ F + Y + S H H+ +EF L G ++N R+ L+ G Sbjct: 27 AAGREQTQHGSPLFPIACYAEDLSCFSVAWHWHEEFEFILAALGPIHVDVNKTRLTLQTG 86 Query: 70 DFVFIPLGSHHQSFYEFGATRI--------LNVGISKRFFEQHYLPLL----PYCFVASQ 117 VFI G+ H G + L G+ F+++ PLL P F+ + Sbjct: 87 QGVFINSGALHAVEPAEGRALLHSGVFQPRLVGGMDTVFWQKLIRPLLQPGTPPFFLLDE 146 Query: 118 VYRTNNAFLTYVETVISSLNLRETGLEEFVE---------MVTFYVINRLRHYREEQVID 168 L + + E V ++T V +++ +EQ+ Sbjct: 147 AVPWQRQVLLCLREAWKGVADEPFDYENRVRYHLTAALRLLITQCVSGKVKVSEQEQIAS 206 Query: 169 DVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRIN 228 + + + VE + E +E + A S+ R+ +++ G TP+Q + + R+ Sbjct: 207 ERMKQMLRYVE----EHYAEELTVEKLAGCVALSESACLRSFRQFLGITPIQYVKQFRVE 262 Query: 229 FAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 A + L T ++ E G+S S FIKTF+++ TP+ YR + Sbjct: 263 KAAELLRSTRLKTGEVGLECGFSDASYFIKTFREIKHCTPREYRIRF 309 >UniRef50_Q7UYE3 L-rhamnose operon transcriptional activator n=1 Tax=Rhodopirellula baltica RepID=Q7UYE3_RHOBA Length = 290 Score = 189 bits (481), Expect = 8e-47, Method: Composition-based stats. Identities = 56/288 (19%), Positives = 109/288 (37%), Gaps = 22/288 (7%) Query: 10 EIATAREQQLFNGKNFHVFIYNKT-ESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLER 68 I T +++ F+ F + + + + GLH H++ E ++ G+ L Sbjct: 4 MIPTLKKEDWFHPDGFPIVVERRDPQEPFGLHCHEFAEIVIITGGKGVHITGEDSYELVT 63 Query: 69 GDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPL-----LPYCFVASQVYRTNN 123 GD I H + ++N+ L F +R + Sbjct: 64 GDTFVIGGDRPHD-YLNMDQLSLINILFDPLELPLSIGDLQSLSGYHALFTLEPAWRKRH 122 Query: 124 AF--------------LTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDD 169 F L YVE++ L R G + ++ L + Sbjct: 123 QFTSRLQLNPAELIETLRYVESLDQELKQRSAGFRTMATLTMLQLVTFLSRCYIRTRNPE 182 Query: 170 VPQWLKSTVEKMHDKEQF-SESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRIN 228 + L+ H + F +L+++V +S S+ R + +P++ + ++RI Sbjct: 183 SKKLLRIAEAISHIQRHFDRPISLDDLVEISGMSRRNFIRTFEGTMETSPIKYLIQVRIQ 242 Query: 229 FAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 A + L T+ S+TDIAF+ G+S + F + F+ +P+ YRK++ Sbjct: 243 EASRLLRSTDRSITDIAFDVGFSDSNYFSRQFRTHLGLSPREYRKQMR 290 >UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJ70_CALS8 Length = 286 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 61/279 (21%), Positives = 116/279 (41%), Gaps = 18/279 (6%) Query: 14 AREQQLFNGKNFHVFIYNKT----ESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 +E+ F + +Y K + H HD +E + G ++GK L Sbjct: 7 LKEKVQHGSAVFPINVYEKIFVHENNTLLPHWHDEFEIVYLEKGTASFRVDGKEYFLGPK 66 Query: 70 DFVFIPLGSHHQSFYEFG-ATRILNVGIS------KRFFEQHYLPLLPYCFVASQVYRTN 122 F+F+ GS H E + +S + YL + + Q + Sbjct: 67 QFLFVNCGSIHGGKAEDNPEPYAIVFSLSMLFSEGPDICKSKYLQSVSERKLLVQNSFED 126 Query: 123 NAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYR------EEQVIDDVPQWLKS 176 + +I+ + G E V+ F + L + R ++ +D + +KS Sbjct: 127 EHTRELISNIITVWKEKPKGYELLVKGYLFVIFYYLFNKRYVTASSTDRELDLKLEKIKS 186 Query: 177 TVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEM 236 ++ ++ S+ ++ + L+ S+ Y R + TP+ IN+ R+ A + ++ Sbjct: 187 ALDFINSN-YSSDIDIDLLAKLANLSKFYFCRLFKEITHLTPVDYINKFRVEKAIELIKN 245 Query: 237 TNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 TN S+++IAFE G+++ S FIK FK+ TP Y+K + Sbjct: 246 TNLSISEIAFEVGFNNVSYFIKVFKEYVGVTPFKYKKNV 284 >UniRef50_B7DQ49 Transcriptional regulator, AraC family n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DQ49_9BACL Length = 344 Score = 186 bits (472), Expect = 8e-46, Method: Composition-based stats. Identities = 62/288 (21%), Positives = 109/288 (37%), Gaps = 26/288 (9%) Query: 16 EQQLFNGKNFHVFIYNKTESISG------LHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 E + FH+ Y+ + LH H EF +V G ++ +R +L G Sbjct: 52 EHRQHGDTTFHIRAYHVVLTPGPYQQTVNLHWHSEAEFIVVTRGSVCLQVGSERHVLADG 111 Query: 70 DFVFIPLGSHHQSFY---EFGATRILNVGI------SKRFFEQHYL-PLLPYCFVASQVY 119 D + G H + + G+ S +Q YL PL + Sbjct: 112 DVALLSGGELHSMAAPGKGPSECKAIVFGLDLLEGPSSDRVQQSYLSPLASGKLLLPGAI 171 Query: 120 RTNNAFLTYVE----TVISSLNLRETGLEEFVEMVTFYVINRLR------HYREEQVIDD 169 ++ Y+ ++ +L + G E V+ + V+ +L + + +DD Sbjct: 172 AHDHPVRQYLAARLCEIVEALEEQPVGYELAVKGCLYDVLAQLFRAELLVEHSPRREMDD 231 Query: 170 VPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINF 229 V D + L ++ ++ S+ + R + + PMQ +NE R+ Sbjct: 232 RRADTLKAVLTYIDAHLSDKLRLADLARVANMSEGHFCRFFKEMTHRKPMQYVNERRVAR 291 Query: 230 AKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 A L+ N S+T I + G+ S FIK F+ TP +YRK L + Sbjct: 292 AADLLKDPNRSITAIGMDLGFHDVSYFIKVFRSYKHCTPLAYRKALLK 339 >UniRef50_C0EGN7 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGN7_9CLOT Length = 326 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 60/276 (21%), Positives = 113/276 (40%), Gaps = 20/276 (7%) Query: 21 NGKNFHVFIYNKTESISG---LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLG 77 + KN H+ ++ + E+++ LH+H +YE V G N + ++ G+ + + Sbjct: 50 DAKNLHISLHPRPENVNPKMLLHKHTFYELMYVYRGSCVNHFNENTITIQEGEMLLLNPN 109 Query: 78 SHHQSFYEFGATRILNVGISKRFFEQHYLPLLPY----------CFVASQVYRTNNAFL- 126 + H + N+ + FF+ LL C S + R FL Sbjct: 110 TAHCPETLTDQDCVFNIMFRQNFFQYSLDLLLKDNTLFSSFFMECMFQSSIARDYLFFLP 169 Query: 127 -----TYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM 181 +E +I +++ E + + + L + + ++ + Sbjct: 170 GKASADTIERLIVECFEKQSCYETITQSLLVELFAYLARNSDNSFSYPKNNHERLILKII 229 Query: 182 -HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYS 240 + +E +E L+ + S YL+R ++Y GK +I+ + R+ AK LE ++ S Sbjct: 230 TYIQESPAEITLQKVSEQFQYSTAYLSRMIKQYTGKNFSEIVRDCRLTKAKYYLESSSLS 289 Query: 241 VTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 + DIA GY+ S F K FK+ TP YRK + Sbjct: 290 ILDIALILGYNDVSHFYKVFKQEIGCTPTEYRKHYS 325 >UniRef50_C0EDH7 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDH7_9CLOT Length = 331 Score = 185 bits (470), Expect = 1e-45, Method: Composition-based stats. Identities = 65/296 (21%), Positives = 118/296 (39%), Gaps = 24/296 (8%) Query: 1 MMQPVINAPEIATAREQQLFNGK-----NFHVFIYNKTESISGLHQHDYYEFTLVLTGRY 55 M++ + T Q K + H K S LH HDY+E V +G Sbjct: 29 MLKKLARKNGFYTVPIQFYLTKKEQVAVDLHGLPNAKNAEQSLLHNHDYFELMYVRSGSC 88 Query: 56 FQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVA 115 F +++ L +GD + + + H F + N+ +S+ FEQ LPLL + Sbjct: 89 FNVFESEKITLHQGDILLLNPNAKHDPFTTSEGDCLFNIMLSRELFEQSMLPLLSDNHLI 148 Query: 116 SQVY------------------RTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINR 157 S + R A ++E +I +E G + +E + R Sbjct: 149 SNFFVDYMYHINKTQDYLYFPSRNTKAISPFLEEIILEYINKEQGYVQVIESALVILFAR 208 Query: 158 L-RHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGK 216 L R + +E I+ ++ + ++ L ++ A S YL++ +++ G+ Sbjct: 209 LGRIFAQENHIESSVSNKLIVDVIVYLNQHSADVTLSSLAAEFGYSSGYLSKLIRKHTGQ 268 Query: 217 TPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 + I++ ++ AK LE T +S +IA G+ S ++F+ TP S R Sbjct: 269 SFTDILSNFKLEKAKHLLETTAHSTDEIAQLTGFHDASYLSRSFRSKYGVTPSSCR 324 >UniRef50_UPI0001788255 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788255 Length = 292 Score = 185 bits (470), Expect = 1e-45, Method: Composition-based stats. Identities = 50/285 (17%), Positives = 100/285 (35%), Gaps = 22/285 (7%) Query: 13 TAREQQLFNGKNFHV----FIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLER 68 + +E + + F + + + H H E V+ G +I+ + + + Sbjct: 8 SLKESTVHGNERFPFGAYWYQFAPGAHVVDSHWHKEAEIFYVMEGEVLFQIDSEYIPVRA 67 Query: 69 GDFVFIPLGSHHQSFYEFGA-TRILNVGISKRFFEQHYLPLLPYCFVASQVYR------- 120 G+ +FI G H + + L+ + R Sbjct: 68 GEAIFIDGGDLHTGHAQGNEGCSFCAMVFDVGMLASSSYDLVQEGMIVPFQERRAAFPRR 127 Query: 121 ----TNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVI------NRLRHYREEQVIDDV 170 T+ L +++ ++ + G E ++ F ++ RL + + D Sbjct: 128 MTSGTDERLLEHIKEMMLLSKHKPAGYEAAIKGHLFLMLFQAASSGRLANRSRSEAADMT 187 Query: 171 PQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFA 230 V L + L S+ R + G+TP+ +N R+ A Sbjct: 188 RTERLKKVILYIQSHYHRPIRLSELADLIPMSEGQFCRFFKSMTGQTPVDYMNSYRVRQA 247 Query: 231 KKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 + L + ++DIA + G+ S F++ F+K+ + TP YRKKL Sbjct: 248 AELLRSPDNKISDIALDVGFGHISYFVRVFRKIMNCTPSEYRKKL 292 >UniRef50_C0EGI4 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGI4_9CLOT Length = 333 Score = 185 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 58/260 (22%), Positives = 102/260 (39%), Gaps = 21/260 (8%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISK 98 H H+Y+E V G V L +GD + + H + E + N+ +SK Sbjct: 72 FHNHNYFELAYVYRGECVHATKENTVRLHQGDAILMNPHVLHWMYTEHPQDVVFNIMLSK 131 Query: 99 RFFEQHYLP-----LLPYCFVASQVYRTN-------------NAFLTYVETVISSLNLRE 140 F+ P L + F Y+ N + ++ ++ + Sbjct: 132 EIFQSDVFPCMTDNRLLFHFFLDYFYQLNKLDDSLTFPHSPKHPIEPLIKLMVEEFIEDD 191 Query: 141 TGLEEFVEMVTFYVINRL-RHYREEQVIDDVPQWLKSTVEKM--HDKEQFSESALENMVA 197 + ++ + L R YRE D L TV + H ++ + +LE++ Sbjct: 192 LCYDSVIKAHCIQLFAYLARVYRERYASTDADVELNQTVIHLIYHMQQHLRQLSLESLAE 251 Query: 198 LSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFI 257 S +++R + GK+ +++N +RI AK LE T+ + +IA G + S Sbjct: 252 AFHYSPSHVSRLFRTRLGKSYTEVLNSLRIQTAKSLLETTSLPMGEIADSIGVNDTSYLN 311 Query: 258 KTFKKLTSFTPKSYRKKLTE 277 K FKK TP YRK+ + Sbjct: 312 KIFKKKYGLTPLQYRKQFQQ 331 >UniRef50_C9LA22 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C9LA22_RUMHA Length = 277 Score = 185 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 60/239 (25%), Positives = 112/239 (46%), Gaps = 5/239 (2%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSF-YEFGATRILNVGISK 98 H H + E V G + +I GK++ +++ D + I H F + + +GI Sbjct: 37 HSHYFSELFFVTKGTGYFQIEGKQIPVQKNDLILINPNIPHTEFGNKEQPWEYIALGIEG 96 Query: 99 RFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRL 158 F Q+ PY + + R + Y+ T++ + ++ G + + + ++ + Sbjct: 97 VQF-QYSEKEAPYSYSVFSLSREHREIPWYLSTLVKEIQTQQEGYQTICQNLLELILLSV 155 Query: 159 RHYREEQVIDDVPQWLKS---TVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYG 215 ++ + Q VE+ ++ + L+ + AL ++ YL A + Y G Sbjct: 156 ARSTRQEFLSAPRQKTTRECRLVEQYINEHYHEDITLDTLSALVHINKYYLVHAFKNYKG 215 Query: 216 KTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 +P+ + + R+ A+ LE TNYSVT I +G+SS S F +TF++LT TP +YRKK Sbjct: 216 VSPINYLIQRRVEEARYLLESTNYSVTKIGEISGFSSQSYFSQTFRRLTGTTPNAYRKK 274 >UniRef50_C6IZN9 AraC family transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZN9_9BACL Length = 301 Score = 184 bits (467), Expect = 3e-45, Method: Composition-based stats. Identities = 59/286 (20%), Positives = 108/286 (37%), Gaps = 28/286 (9%) Query: 14 AREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVF 73 E+Q F + + Y E + H HD EF L G +++ + G+ VF Sbjct: 16 GNERQPFGT---YWYRYGPGEHVIDCHWHDEAEFFYCLEGETLFQVDTDYFPVGAGEAVF 72 Query: 74 IPLGSHHQSF-YEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRT----------- 121 I G H + + ++ + + + V R Sbjct: 73 IDGGDIHAAHAHGDQGCAFFSLVFDTQLLASAHYDAVQENLVLPLQERKATFPRHIRRET 132 Query: 122 --NNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRL--------RHYREEQVIDDVP 171 + + L ++ ++ S + G E V+ F ++ + R + + Sbjct: 133 AADLSLLEHIVALMRSCSTESPGYEGAVKGHLFLMLAEIAATGRAVNRSHSSSRSESSKI 192 Query: 172 QWLKSTVEKMHDKEQFSE-SALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFA 230 LK+ ++ H + +S L + AL S+ R + +TPM IN RI A Sbjct: 193 DRLKTVIQ--HIQHNYSHPIRLAELAALIPMSEGQFCRFFKSMTRQTPMDYINSYRIRQA 250 Query: 231 KKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 + L ++DIA E G+ + S FI+ F+K + +P +RK+L Sbjct: 251 AELLREPERKISDIALEVGFDNISYFIRVFRKAMNCSPSEFRKRLQ 296 >UniRef50_C5RE92 Transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=C5RE92_CLOCL Length = 286 Score = 183 bits (465), Expect = 5e-45, Method: Composition-based stats. Identities = 56/275 (20%), Positives = 112/275 (40%), Gaps = 16/275 (5%) Query: 15 REQQLFNGKNFHVFIYNKTESIS----GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 +E + +F + Y+ + S H H YE +++G + +NG + L+ GD Sbjct: 7 KENRQHGTFDFPIAFYHVSPSHPRYNMPYHWHTEYEIIRIISGEFLLTLNGNELKLKTGD 66 Query: 71 FVFIPLGSHHQSFYEFGATRILNVGISKRF-----FEQHYLPLLPYCFVASQVYRTNN-A 124 FI G H + + + ++ V + + T+N Sbjct: 67 LAFIHAGILHGGTPIDCVYECIVFDMKSLLKVNSTCSKQIQDIIHNSKVINSLLPTDNLE 126 Query: 125 FLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEK---- 180 T + S+ ++ G E + ++++ + +R + + + + Sbjct: 127 LQTVCNYLFESMAQKKLGYELVTQGSLYHLLGIILEHRLYSTPKEATSKNQQRINQFKNV 186 Query: 181 --MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTN 238 + +++ LE++ + + +Y R + ++P+ +N RI + +QL TN Sbjct: 187 LSLIEQQYPDPLTLEDLSKAAGMTPKYFCRFFRGMTQRSPIDYLNYYRIESSCEQLVSTN 246 Query: 239 YSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 S+T+IA G++ S FIKTFKK TPK Y K Sbjct: 247 ESITEIALNCGFNDISYFIKTFKKYKGVTPKQYLK 281 >UniRef50_A7VQ18 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VQ18_9CLOT Length = 280 Score = 182 bits (463), Expect = 8e-45, Method: Composition-based stats. Identities = 55/270 (20%), Positives = 109/270 (40%), Gaps = 18/270 (6%) Query: 23 KNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQS 82 +N +Y + H H + E G ++NG+ + GDFV I H Sbjct: 12 RNLPFSVYIAQDEKFSWHCHKHMELDYCSEGHCTIKVNGESYDCQPGDFVIIHTMEDHTL 71 Query: 83 FYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQV-----------YRTNNAFLTYVET 131 ++L V + + + P ++ + + + + Sbjct: 72 I-RNSDCKLLGVQMDLSVLDTAFSPFYESQYLVPFIRGSGKYQRRIRVPKGSLLESILSE 130 Query: 132 VISSLNLRETGLEEFVEMVTFYVINRLRHYR-----EEQVIDDVPQWLKSTVEKMHDKEQ 186 ++ ++ G E +++ + + L + E V + +K ++ M + Sbjct: 131 ILVEYQKKQPGYEMYIKGDILRLFSCLVRTKVIEIGERNVNFQDLERIKPVIDYMEQHIE 190 Query: 187 FSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAF 246 +E ++ ++ S + R ++ GKT ++ N IRI A+K L T+ ++T+IAF Sbjct: 191 -TELSVAAAAKIACMSYYHFCRLFKKVIGKTFVEYQNFIRIRRAEKLLITTDRTITNIAF 249 Query: 247 EAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 E G+ S + F + FKK T P +YRKK+ Sbjct: 250 ETGFGSVAYFNRVFKKETGQAPANYRKKMR 279 >UniRef50_C0EDW5 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDW5_9CLOT Length = 326 Score = 182 bits (461), Expect = 1e-44, Method: Composition-based stats. Identities = 62/263 (23%), Positives = 115/263 (43%), Gaps = 19/263 (7%) Query: 31 NKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATR 90 N+ + LH H Y+E V G+ + + L GD + + H+ + E Sbjct: 60 NEQKKYLRLHTHTYFEMIYVYHGKAYNNFADSSMTLHTGDILILNPNIPHRLYIESPEDI 119 Query: 91 ILNVGISKRFFEQHYLPLLP-----YCFVASQVYRTNNA-------------FLTYVETV 132 + N+ ISK FE+ +L L+ F S +Y N A ++ + Sbjct: 120 VFNIMISKDLFEKSFLLLISENDLFSNFFISYLYHMNQASDSILFRHNPESGITAVLDMM 179 Query: 133 ISSLNLRETGLEEFVEMVTFYVINRL-RHYREEQVIDDVPQWLKSTVEKMHDKEQFSESA 191 I + G E+ +E RL R Y ++ ++++ + K + +E F+E+ Sbjct: 180 IEEFFNKPMGYEKALESFLALTFTRLTRSYSHQENLEELKKQQKIMPIIAYIRENFAEAT 239 Query: 192 LENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 L + S++YL+R ++ GK+ +I ++ +A++ L + +++IA GY+ Sbjct: 240 LVSTAQQFNYSEKYLSRLIKQRTGKSFNEISIGYKLEYARELLLNSVLPISEIAQRVGYA 299 Query: 252 SPSLFIKTFKKLTSFTPKSYRKK 274 + S F K FKK TP +RK Sbjct: 300 NVSYFFKAFKKRYMQTPYQFRKS 322 >UniRef50_C0EDI6 Putative uncharacterized protein n=2 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDI6_9CLOT Length = 371 Score = 181 bits (459), Expect = 3e-44, Method: Composition-based stats. Identities = 55/274 (20%), Positives = 114/274 (41%), Gaps = 26/274 (9%) Query: 24 NFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSF 83 N H+ +N++ H+HD++E V+ G ++G+R+LLE+GDF + + HQ Sbjct: 91 NAHIPFFNRS---PQPHKHDFFELVYVVRGSMKNVVDGRRILLEQGDFCLMNPNAVHQVE 147 Query: 84 YEFGATRILNVGISKRFFEQHYLPL-----LPYCFVASQVYRTNNA-------------- 124 + +N + K F + +L + L F +Y N Sbjct: 148 TDGKDPLAINFLMKKELFNKAFLSIVLENELFANFFVDSIYHKKNKQNYLVFSARHLEEP 207 Query: 125 -FLTYVETVISSLNLRETGLEEFVEMVTFYVINRL-RHYREEQVIDDVPQWLKSTVEKM- 181 Y+ + + + +E + R Y+ E + + + K+ Sbjct: 208 IISQYLLQIFREYENDQLYSQRVIESAMSCLFVEFTRSYKRELEFESLQDLPGGNISKII 267 Query: 182 -HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYS 240 + E + + L+ +YL ++Y G++ +I+ + R+ A + L+ T Sbjct: 268 SYLSENYRTATLQTTAKQFNYHPKYLPNLLKKYLGQSFSEIVQQFRLAHACELLKQTELP 327 Query: 241 VTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 ++D+A E+GY++ + F K F++ +P YR + Sbjct: 328 ISDVAQESGYTNRTYFYKVFQQKFGMSPNDYRHQ 361 >UniRef50_C0EIL7 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIL7_9CLOT Length = 332 Score = 180 bits (458), Expect = 3e-44, Method: Composition-based stats. Identities = 62/259 (23%), Positives = 109/259 (42%), Gaps = 24/259 (9%) Query: 39 LHQHDYYEFTLVLTGRYFQEI-NGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGIS 97 +H H Y+E V G N +R++L +GD + + + H + I N+ + Sbjct: 71 MHNHGYFELVYVYHGSCVNLFPNQERIVLNQGDILLLNPNALHCPYTTLEDDYIFNIVLK 130 Query: 98 KRFFEQHYLPLLPYC-----FVASQVYRTNNA-------------FLTYVETVISSLNLR 139 + FE+ L LL F + +YR N A +E +I+ L + Sbjct: 131 PKLFEKSMLSLLSDNPLFSNFFVNYMYRVNKARDYMLFHTNGEKRIAQTMENIITELYSK 190 Query: 140 ETGLEEFVEMVTFYVINRLRHYREEQV----IDDVPQWLKSTVEKMHDKEQFSESALENM 195 E E + L +EQ+ D+V + + D E FS++ L+++ Sbjct: 191 EMCYRRAAEAELIVLFTCLARIYKEQLGLKGFDEVKNKQVTDIITYMD-ENFSQATLQSV 249 Query: 196 VALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSL 255 S YL+R +++ K +II+ ++ A LE T+ + +IA G++ S Sbjct: 250 ADHFGYSTHYLSRMIKKHTNKNFSEIIHSFKLENACTYLETTDIPMREIAELVGFNDASY 309 Query: 256 FIKTFKKLTSFTPKSYRKK 274 F K FK+ +P YRK+ Sbjct: 310 FHKVFKQKYGQSPAEYRKQ 328 >UniRef50_C7H4U6 Transcriptional regulator, AraC family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4U6_9FIRM Length = 332 Score = 180 bits (458), Expect = 3e-44, Method: Composition-based stats. Identities = 62/288 (21%), Positives = 111/288 (38%), Gaps = 28/288 (9%) Query: 12 ATAREQQLFNGKNFHVFIYNKT--ESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 A RE F + Y + H H+ +E+ L + G ++N RV L+ Sbjct: 48 AEGREMVQHGSALFPIACYAENLKSYSVAWHWHEEFEYILAMKGPLTVDVNKTRVTLQTN 107 Query: 70 DFVFIPLGSHHQSFYEFGATRILN---------VGISKRFFEQHYLPLL----PYCFVAS 116 VF+ G H +L+ G+ F+++ P+L P F+ Sbjct: 108 QGVFLNSGILHAVEQAEKGEALLHSGVFHPRLVGGMDTIFWQKLIRPMLQPDAPAFFLLD 167 Query: 117 QVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRL---------RHYREEQVI 167 + L + ++ + E V + L + ++EQ+ Sbjct: 168 EAVPWQAQVLACLREAWQAVAVEPFDYENRVRYYLSAALRLLSTQCVGGKTKVSQQEQIA 227 Query: 168 DDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRI 227 + + + VE + E +E + A A S+ R+ ++ G TP+Q + + R+ Sbjct: 228 AERMKQMLRFVE----EHYAEELTVERIAASVALSESACLRSFRQMLGITPIQYVKQFRV 283 Query: 228 NFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 A + L T +I E G++ S FIKTF+++ TPK YR K Sbjct: 284 EKAAELLRSTRLKTGEIGMECGFADGSYFIKTFREIKHCTPKEYRAKF 331 >UniRef50_Q0TS97 Transcriptional regulator, AraC family n=6 Tax=Clostridium RepID=Q0TS97_CLOP1 Length = 285 Score = 180 bits (456), Expect = 6e-44, Method: Composition-based stats. Identities = 63/278 (22%), Positives = 116/278 (41%), Gaps = 16/278 (5%) Query: 15 REQQLFNGKNFHVFIYNKTESIS----GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 +E + +F + Y+ T + S H H E +L G + I+ +++L ++ D Sbjct: 7 KENKQHGTFDFPIEFYHVTPNHSRYNMPYHWHTECEIIRILEGEFILFIDKEKILAKKND 66 Query: 71 FVFIPLGSHHQSFYEFGATRILNVGISKRFFE------QHYLPLLPYCFVASQVYRTNNA 124 +F+ G H + + + Q Y + +A ++ A Sbjct: 67 IIFVHSGIFHGGLPNDCIYECIVFDMKLLLKDNNACTKQIYDIVNHNKVIAHKLPSNVQA 126 Query: 125 FLTYVETVISSLNLRETGLEEFVEMVTFYVI-----NRLRHYREEQVIDDVPQWLK-STV 178 ++ ++ ++ TG E + +Y+I N+L + ++L+ V Sbjct: 127 LNNCCTSLFEAMRVKSTGYEFIAQGALYYLIGTILENQLYVKNNKYTKKTKERFLQLKNV 186 Query: 179 EKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTN 238 + + E + LE++ S S +Y R KTP++ +N RI + ++L T Sbjct: 187 ITLIENEYQNPLTLEDLSKASGMSPKYFCRFFHEMINKTPIEYLNYYRIEISCEKLLATE 246 Query: 239 YSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 S+T+IA G++ S FIKTFKK TPK Y K L Sbjct: 247 LSITEIALNCGFNDVSYFIKTFKKHKGVTPKQYLKSLK 284 >UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RR78_9CLOT Length = 281 Score = 180 bits (456), Expect = 6e-44, Method: Composition-based stats. Identities = 55/251 (21%), Positives = 103/251 (41%), Gaps = 15/251 (5%) Query: 36 ISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG-ATRILNV 94 + H H YYE +L+G+ IN LE GD IP H++ YE + Sbjct: 32 MKRPHYHSYYEIYYLLSGKCKMFINQDIYYLEPGDMTIIPPLEVHKALYEPSWEAERFGI 91 Query: 95 GISKRFFEQ--HYLPLLPYCFVASQVYRT-NNAFLTYVETVISSLNLRETGLEEFVEMVT 151 S+ + + SQ RT + F +E +++ + E + + ++ Sbjct: 92 YFSRDTVTSFLSLCGREAFGHIFSQPKRTIPSEFRPKIEELLAQMQDEEKQGDSYCQIQL 151 Query: 152 FYVINRLRHY--------REEQVIDDVPQWLKSTVEKMHDKEQFSE-SALENMVALSAKS 202 +++++ RE +++ + + M + + E L + A + S Sbjct: 152 CSLLHQILVVLGRCQEARREGHALEEAEEAMVRAARYM--NQHYQEGVTLGQVAAFANMS 209 Query: 203 QEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKK 262 Y ++ + G + +N IR+ A L T+ SVT +A G+S + F F++ Sbjct: 210 PTYFSKKFKSSTGLCFKEYLNYIRVQKASDMLRNTDLSVTGVAMACGFSDGNYFGDVFRR 269 Query: 263 LTSFTPKSYRK 273 LT +P+ YRK Sbjct: 270 LTGVSPREYRK 280 >UniRef50_UPI0001789C33 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C33 Length = 293 Score = 178 bits (451), Expect = 2e-43, Method: Composition-based stats. Identities = 54/272 (19%), Positives = 104/272 (38%), Gaps = 15/272 (5%) Query: 18 QLFNGKNFHVFIYNKTE-SISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPL 76 +F +F +FI + E H HD+ E + V G + + + + ++RGD IP+ Sbjct: 11 DIFFNPDFDIFINREVEGFCLSQHTHDFIEISYVEEGSGYHYVEDQLIPIKRGDLFVIPI 70 Query: 77 GSHH--QSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTN------------ 122 G+ H + + I N EQ + + S +Y ++ Sbjct: 71 GTSHVFRPSSQDNQLVIYNCIFRTCLLEQLKSVICESTKLHSLLYGSSPSAKWLQYQDKF 130 Query: 123 NAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMH 182 + FL+ + + + E + V+ L+ Y + + P + Sbjct: 131 DKFLSIMHGMFREYLKKGPRYEFLMMGQLIQVLAMLQRYECDGSMVSTPTNNMDDAIQYI 190 Query: 183 DKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 + + ++ + S S + R ++ G T MQ + IR+ + L+ T S+ Sbjct: 191 NDHFATNLTVQQVAERSFMSPSHFQRLFKKTTGVTFMQFLQNIRVQRCCELLKSTEISIQ 250 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 + A + GY F F+K T TP+ YR+ Sbjct: 251 EAANQVGYQDMKFFHSLFRKKTGVTPREYRRS 282 >UniRef50_C0ABA0 L-rhamnose operon transcriptional activator n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0ABA0_9BACT Length = 297 Score = 177 bits (450), Expect = 3e-43, Method: Composition-based stats. Identities = 57/294 (19%), Positives = 107/294 (36%), Gaps = 32/294 (10%) Query: 14 AREQQLFNGKNFHVFIYNKTESISG-----------LHQHDYYEFTLVLTGRYFQEINGK 62 A+ F F V + G H HD+ E +V GR + G+ Sbjct: 5 AKGVDYFGADGFPVTVRRVATQADGGESHPHDVTEIEHWHDFCELAMVTGGRGVHVLEGE 64 Query: 63 RVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPL-----LPYCFVASQ 117 + GD + H F E ++NV L F+ Sbjct: 65 SFHVSTGDVFVLQGRQVH-CFRERQGLALINVMYDPERLPLPLGLLRRLPGYSALFMLEP 123 Query: 118 VYRTNNAFLTYV----------ETVISSLNLRETGLEEFVEMVTFYVINRL-----RHYR 162 +R+ + F + + E ++ + +E E V ++ L RHY Sbjct: 124 TFRSTHRFSSRLRLARRELGSAEAIVERIENESKAAQEGHEAVLLSLLVELMVLLSRHYA 183 Query: 163 EEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQII 222 + + + M ++ LE + + S+ L R ++ G++P+ + Sbjct: 184 QSDTRESHALLQVGQLVSMLEQRFGEPWTLEQLAEQARVSRSNLLRMFRQATGQSPIDFL 243 Query: 223 NEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 +RI A++ L ++ +T+IA E G+S + F + F+K TP YR+++ Sbjct: 244 IGLRIEAARRLLRRSDLGMTEIALECGFSDGNFFPRQFRKTCGVTPSIYRRQMR 297 >UniRef50_C6LDM6 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LDM6_9FIRM Length = 298 Score = 177 bits (449), Expect = 4e-43, Method: Composition-based stats. Identities = 53/283 (18%), Positives = 100/283 (35%), Gaps = 22/283 (7%) Query: 12 ATAREQQLFNGKNFHVFIYNKTESIS-GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 A +E + F YN + + H H+ YE + V G L GD Sbjct: 12 ANGQELKQHGTGLFPCGCYNASPEVQVPWHWHEEYECSYVFHGAVTYHTPQGEFRLGEGD 71 Query: 71 FVFIPLGSHHQSFYEFGAT----------RILNVGISKRFFEQHYLPLLPYCFVASQVYR 120 +F+ G+ H + R++ ++++ PL + + R Sbjct: 72 GIFLNSGTLHTVEVAPAGSLKKSDLVFHGRLIYGSRDSVLYQKYVQPLSAPDAFQTLILR 131 Query: 121 ----TNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYRE------EQVIDDV 170 + L+ ++ + G E V + + L YR Sbjct: 132 RTVSWHAEILSRIKKAVRLCQNEPEGYEFTVRSLLSEIFFDLYCYRNAPAAETSAATASE 191 Query: 171 PQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFA 230 +K + + + + + A + + R Q+ +P+Q + RI + Sbjct: 192 NARIKQMLRYLQEN-YTRRVTVAELAAHANICERECLRCFQKVLHLSPIQYLIRYRIARS 250 Query: 231 KKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 L ++ SV +I+ G+ SPS F KTF+++T TP YR+ Sbjct: 251 CILLRESDLSVLEISNLCGFESPSYFTKTFRQITGGTPTQYRR 293 >UniRef50_A0AET6 Complete genome n=16 Tax=Listeria RepID=A0AET6_LISW6 Length = 277 Score = 176 bits (447), Expect = 6e-43, Method: Composition-based stats. Identities = 60/257 (23%), Positives = 112/257 (43%), Gaps = 12/257 (4%) Query: 30 YNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGAT 89 Y I H HD+ E +++ G+ +I G+RV LE+GD + G H E G T Sbjct: 20 YTNEVRIGDNHHHDFLEISIIYDGKVIYDIEGERVELEKGDMLIFNPGVKHYDITEPGMT 79 Query: 90 RI-LNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVE 148 L++G E + P+ + ++A L+ + +I + + G + ++ Sbjct: 80 NAQLHIGFRNFTLEGYSRNTFPFKKAFLRKKEEDSAILSISKQIIEEKDAEKPGYDLILK 139 Query: 149 M-VTFYVINRLRHYREEQVIDD---------VPQWLKSTVEKMHDKEQFSESALENMVAL 198 V +I+ LR EQ+ ++ Q L + + +K + +L + Sbjct: 140 AFVMQLIIHVLREATPEQLENNGVKLSTDEQQKQLLVNEIIHYMEKHHTEDVSLSTLSQT 199 Query: 199 SAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIK 258 S Y+++ + G++P+ + +IR++ A++ L+ N +V A GY+ F K Sbjct: 200 MYISPAYISKVFKEETGESPINYLIKIRLSRAEELLKNKNITVKQAANMVGYNDAYYFSK 259 Query: 259 TFKKLTSFTPKS-YRKK 274 FKK F P +RK Sbjct: 260 LFKKYYGFPPSENWRKS 276 >UniRef50_UPI0001C356F7 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C356F7 Length = 268 Score = 176 bits (447), Expect = 6e-43, Method: Composition-based stats. Identities = 57/251 (22%), Positives = 103/251 (41%), Gaps = 13/251 (5%) Query: 35 SISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGA-TRILN 93 ++ H H +YEF + +G IN +E GD +F+ G H++ Y + Sbjct: 15 HMAESHWHTHYEFYYLYSGHCKIFINHTLYYVEPGDIIFLKPGEIHRTTYHSSPVNERVT 74 Query: 94 VGISKRFFEQHYL----PLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEM 149 + + + + Y F S+V N + VE +I + ETG + F + Sbjct: 75 ISFDGEYLDSMKELCGEENVEYIFRNSKV-TVPNGNRSRVEELIRRIEYEETGQDGFSPL 133 Query: 150 V----TFYVINRLRHYREEQVIDDVPQWLKSTVE---KMHDKEQFSESALENMVALSAKS 202 + + ++ L +E + + + T+E K + LE + LS S Sbjct: 134 MKKGCFYELLVSLSRCQEAETDHGRLEIGEETIEAAAKYIYDHYQNPITLEEVAELSHMS 193 Query: 203 QEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKK 262 Y +R + G + + IRI A + L + SVT+IA G+ + F F+K Sbjct: 194 PAYFSRKFKAVTGFGYKEYLTNIRIREASRLLLHSACSVTEIADRCGFGDGNYFGDAFRK 253 Query: 263 LTSFTPKSYRK 273 +P+++RK Sbjct: 254 AKGVSPRAFRK 264 >UniRef50_C6LDG4 Transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=C6LDG4_9FIRM Length = 369 Score = 176 bits (447), Expect = 7e-43, Method: Composition-based stats. Identities = 63/284 (22%), Positives = 106/284 (37%), Gaps = 21/284 (7%) Query: 9 PEIATAREQQLFNGKNFHVFIYNKTES----ISGLHQHDYYEFTLVLTGRYFQEINGKRV 64 E+ + +E + F IY T LH H E V G + Sbjct: 86 KELESFQETKKHGSTMFPFNIYPCTIPGDFPSVALHWHKSMEIIFVKKGTGRIQTGRNMQ 145 Query: 65 LLERGDFVFIPLGSHHQSFYEFGAT-RILNVGISKRFF---------EQHYLPL----LP 110 GD +P G+ H + G N+ F +++ +PL L Sbjct: 146 EARSGDIFVMPPGTLHAIYAAAGYNMEYENIIFEVEFLGGGAADVCDKEYLVPLASGQLL 205 Query: 111 YCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDV 170 V S V + + RE G E V+ ++ L E D Sbjct: 206 QPAVFSPVDAGYKQISACLRRAEELCSARERGYELGVKAALLELLLYLLRMCPEAPERDT 265 Query: 171 P--QWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRIN 228 P + LK ++++ +++ + +M A+ S + R +R G +P+ +NE R+ Sbjct: 266 PDMERLKRVLQRI-EQDYAKPLTVPDMAAVCGCSSSHFMRWFKRMTGTSPLAYLNERRLA 324 Query: 229 FAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 A + L T+ + IA AG+ + S F + FKK TP++YR Sbjct: 325 AAAENLRETDDKILVIAENAGFENLSNFNRQFKKRYGVTPRAYR 368 >UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MKI2_9FIRM Length = 284 Score = 176 bits (446), Expect = 8e-43, Method: Composition-based stats. Identities = 59/276 (21%), Positives = 112/276 (40%), Gaps = 16/276 (5%) Query: 15 REQQLFNGKNFHVFIYNKTESISG----LHQHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 RE++ + F Y TE+ H H+ E V +G + ++G ++ G Sbjct: 7 REKREHGTREFPYACYRVTENFPRYNMIPHWHNECEIIYVRSGYFELFLDGHTHRIDAGC 66 Query: 71 FVFIPLGSHHQSFYEFGA-TRILNVGI-----SKRFFEQHYLPLLPYCFVASQVYRTNNA 124 I GS H + L + S + H P++ + + ++ Sbjct: 67 CSLIIGGSMHGGTPKDNCRYDCLVFDMAALLKSSQICTLHLQPIINHERRFITFFSADSE 126 Query: 125 FLTYVETVISSLNLRETGLEEFVE----MVTFYVINRLRHYREEQVIDDVPQWLK--STV 178 + VI ++ +E G E V + +++ R HY+ + + ++ V Sbjct: 127 PAKDAKAVIDAMLEKEPGYEFTVPGRLLCMLGHIVARQEHYQSGETAASDIKKVRRFKNV 186 Query: 179 EKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTN 238 ++ LE + ++ Y RA + Y GKTP++ +N RI A + + T+ Sbjct: 187 ISYIEQNYRKNITLEELANECGMNRNYFCRAFKEYTGKTPVEYLNYFRIESACELIASTD 246 Query: 239 YSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 + DIA + G++ S FIK FK + TP+ Y ++ Sbjct: 247 EKLIDIAMKCGFNDYSYFIKVFKSMKGVTPRDYCRR 282 >UniRef50_A8S9Z6 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9Z6_9FIRM Length = 285 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 53/281 (18%), Positives = 100/281 (35%), Gaps = 18/281 (6%) Query: 12 ATAREQQLFNGKNFHVFIYNKTES----ISGLHQHDYYEFTLVLTGRYFQEINGKRVLLE 67 A+ +E + F +Y T LH H+ E V G ++ Sbjct: 5 ASLQETKQHGAVRFPFNLYPCTIPGDFQQVALHWHESMELVFVKQGMGLVQVGVVTYPAY 64 Query: 68 RGDFVFIPLGSHHQSFY-EFGATRILNVGISKRFF--------EQHYLPLLP-YCFVASQ 117 RGD G+ H E N+ E++ LPL + + Sbjct: 65 RGDIFIFAPGTLHALRQAEGQRMEYENIIFEPELLGGAEDLCAEKYLLPLQSGRLSLPVR 124 Query: 118 VYRTNNAFLT---YVETVISSLNLRETGLEEFVE-MVTFYVINRLRHYREEQVIDDVPQW 173 + + +L + + + + G E V+ + ++ + R+ + Sbjct: 125 LTPNDLCYLQAAACLRELEDANRAKRPGYELLVKGALLRFLALLIAQGRQCLSTETADTQ 184 Query: 174 LKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQ 233 TV + + + + + S + R ++ G++ + +NE R+N A + Sbjct: 185 RLKTVLQWLSAHYAEPLRVADAAGVCSFSASHFMRWFRQMTGQSFIAFLNEYRLNTAAEA 244 Query: 234 LEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 L T+ +V IA G+ + S F + FK TP+ YRKK Sbjct: 245 LRTTDETVLTIASRCGFENLSYFNRAFKAHFGMTPRDYRKK 285 >UniRef50_A8RL67 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RL67_9CLOT Length = 272 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 53/249 (21%), Positives = 107/249 (42%), Gaps = 8/249 (3%) Query: 33 TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSF-YEFGATRI 91 +++S H HDY+E + G F I + + G+F+ H S+ E + Sbjct: 17 NDNMSKSHYHDYFELYYLEEGERFHIIQDRLYCIHPGEFLIFSPYVMHHSYGQENVPFKR 76 Query: 92 LNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRE----TGLEEFV 147 L V SK + + LL + VY+ + V ++ L + E+++ Sbjct: 77 LLVYFSKEEVDS--VQLLKVLEKGTGVYKPDQREKQVVHRMLDDLLKEQDDPQAYHEDYI 134 Query: 148 EMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLT 207 + + + + V + + + +H Q + +++ + +S S YL Sbjct: 135 HTLLNMALLTIARNIQTPVKPEKRNRITDVISYIHQNYQ-EDISIDQLAQMSYVSPYYLC 193 Query: 208 RATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFT 267 R +RY T +Q +N R+ A++ TN ++T+I+ + G+S+ + F + FK + T Sbjct: 194 REFKRYTNSTIIQYVNVTRVMNAQRMFMETNKNITEISRDTGFSNITHFNRVFKSVMGMT 253 Query: 268 PKSYRKKLT 276 P ++RK Sbjct: 254 PSNFRKMYK 262 >UniRef50_C6J3J7 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J3J7_9BACL Length = 281 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 66/258 (25%), Positives = 112/258 (43%), Gaps = 11/258 (4%) Query: 26 HVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQ-SFY 84 H F E S +H HD+YE LV G+ +NG+ V + G VFI H Sbjct: 22 HFFTVPSLEYASPIHCHDFYELFLVTQGQALHIVNGEAVPITEGTLVFIRPQDIHCYEKL 81 Query: 85 EFGATRILNVGISKR-------FFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLN 137 + +N+ ++ F P V V + + + +N Sbjct: 82 QEHDCEFINLCYTREVIHEVFAFLGSSITPENLLSSVLPPVTLLSTGEKERLTDRLERIN 141 Query: 138 LRETGLE--EFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENM 195 L + L+ + V ++ + ++ P WL+S + +M KE FSE ++ M Sbjct: 142 LVQDQLQVAGLLRAVLVELLIQYFWKYQQTDTKAYPLWLESLLLQMQRKENFSE-GVQRM 200 Query: 196 VALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSL 255 LS +S ++ R + TP++ IN +R+++AK L T ++TDIA AG+++ S Sbjct: 201 YELSERSPGHINRVFRSLLHTTPVEYINRLRLDYAKHMLVTTRLNITDIALSAGFNNLSH 260 Query: 256 FIKTFKKLTSFTPKSYRK 273 + FKK TP ++R Sbjct: 261 YYHLFKKEFGITPLAFRN 278 >UniRef50_C0EG54 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EG54_9CLOT Length = 346 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 57/283 (20%), Positives = 116/283 (40%), Gaps = 27/283 (9%) Query: 15 REQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFI 74 E+ N H+ H+HD++E V G ++ V+L++GD + Sbjct: 56 FERDQLISANMHL----NIPMALAPHKHDFFELIYVYQGSVINVVDAHEVVLQQGDLCIM 111 Query: 75 PLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLL-----PYCFVASQVYR--------- 120 + H + N+ I F Q +L L+ F + +Y+ Sbjct: 112 NASAVHTLGKLGKQDTVYNILIKPELFNQAFLGLIAENEIISSFFLNSIYQKSISRNFMT 171 Query: 121 ------TNNAFLTYVETVISSLNLRETGLEEFVEM-VTFYVINRLRHYREEQVIDDVPQW 173 ++ TYV +I + ++ + +E+ + I R Y+ Q + + Sbjct: 172 FHTQDFPSDDAETYVHRLIMENHFKDIYYNKSIEISLVGLFIELTRGYKHRQDQNSSIEL 231 Query: 174 LKSTVEKM--HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAK 231 S V ++ + + + + +++ + + YL+ ++Y KT +I+ IR AK Sbjct: 232 GMSNVSQIIAYISDHYKDISIKQVADHFSYHPNYLSSLLKKYTDKTFSEILQNIRFTAAK 291 Query: 232 KQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 + L+ + + +I + GY++ S F +TFK+ TP YRK+ Sbjct: 292 EYLQKLDIPINEIVYMVGYTNKSHFYRTFKQEMGITPAQYRKQ 334 >UniRef50_C8WV57 Transcriptional regulator, AraC family n=2 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius RepID=C8WV57_ALIAD Length = 300 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 60/286 (20%), Positives = 106/286 (37%), Gaps = 26/286 (9%) Query: 16 EQQLFNGKNFHVFIYNKTESISG------LHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 E + FH+ Y+ + LH H EF +V G ++ +R +L G Sbjct: 8 EHRQHGDATFHIQAYHVVLTPGPHQQTVNLHWHSEAEFIVVTRGSVCLQVGSQRHVLADG 67 Query: 70 DFVFIPLGSHHQSFY---EFGATRILNVGI------SKRFFEQHYL-PLLPYCFVASQVY 119 + G H + + G+ S +Q YL PL Sbjct: 68 GVALLSGGELHSMASPGKGPSECKAIVFGLDLLEGPSGDRVQQSYLSPLASGKLRLPGAI 127 Query: 120 RTNNAFLTYVE----TVISSLNLRETGLEEFVEMVTFYVINRLRHYR------EEQVIDD 169 ++ ++ + +L + G E V+ + V+ +L + + +DD Sbjct: 128 AHDHPVRPHLAARLCEIAEALEEQPVGYELAVKGCLYDVLAQLFRAKLLVEDSPRREMDD 187 Query: 170 VPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINF 229 V D+ + L ++ ++ S+ + R + + PMQ +NE R+ Sbjct: 188 RRADTLKAVLTYIDEHLSDKLRLADLARVANMSEGHFCRFFKEMTHRKPMQYVNERRVAR 247 Query: 230 AKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 A L+ N S+T I + G+ S FIK F+ TP +YRK L Sbjct: 248 AADLLKDPNRSITAIGMDLGFHDVSYFIKVFRSYKHCTPLAYRKAL 293 >UniRef50_Q9KBM0 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus halodurans RepID=Q9KBM0_BACHD Length = 299 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 56/280 (20%), Positives = 104/280 (37%), Gaps = 22/280 (7%) Query: 16 EQQLFNGKNFHVFIYNKTES----ISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDF 71 E + F +Y E I H H E+ + G +I K + G+ Sbjct: 8 EARAHGDPMFPCNVYRVKEVNGQVIIHCHWHHEMEWIYMEAGEAEFQIGTKMTTVRAGEG 67 Query: 72 VFIPLGSHHQSFYEFGATRILNV---------GISKRFFEQHYLPLLPYC-----FVASQ 117 +FIP G H ++ L + Y+ Sbjct: 68 LFIPSGHLHGAYPVSDKPFSLYATVVHPDFISSFGYDLIQSRYIDPFKDSERTGPIKLCP 127 Query: 118 VYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHY--REEQVIDDVPQWLK 175 + + LT ++ IS +E G E ++ ++ L + R E+ PQ ++ Sbjct: 128 THYWMSDMLTMLQATISQFQQKEEGYELVIKANLLQMMAELVKHFPRTEEQKTGTPQQIR 187 Query: 176 ST--VEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQ 233 V + D+ + ++ + L S+ + +R + T ++ I+ R+N A + Sbjct: 188 QIKKVLQFIDEHYDEKLTIKQLANLVQMSEGHFSRFFKSIVRMTAVEYIHTQRLNKAARL 247 Query: 234 LEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 L T+ ++ DI+ G+ PS FIK FK+ TP +R+ Sbjct: 248 LRETDRTIMDISMSVGFDHPSYFIKLFKRHKRCTPSEFRR 287 >UniRef50_A6LR84 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=A6LR84_CLOB8 Length = 285 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 106/248 (42%), Gaps = 16/248 (6%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKR 99 H H++ + + G+ F N K + +GD + I H R + I Sbjct: 36 HWHEHLQVFYFINGKGFLRCNTKSFNIIQGDVIIINSRDLHYLESLNNDLRFYLIRIDLP 95 Query: 100 FF---------EQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMV 150 F ++ PL + + R ++ + ++T+I N +E G E V+ Sbjct: 96 FLFSDQVDLCQTKYLSPLSENLILFKNLIRNDDEIVRCIKTIIKEYNKKEIGYELAVKAN 155 Query: 151 TF-YVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQF------SESALENMVALSAKSQ 203 + V+ +R+Y ++ V + + E+ + +F + + N+ ++ S Sbjct: 156 LYNLVVLLIRNYIDKFVTKRQLAFKINNDERFYKVFEFVHSNFNKKISTLNLSNIAHVSP 215 Query: 204 EYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKL 263 Y R ++ GKT + INE+R+ + + L+ +N ++T++A G++ + F + FKK Sbjct: 216 YYFCRIFKQITGKTTTEYINEVRLKKSIELLKNSNMNITEVAINCGFNDVNYFSRLFKKK 275 Query: 264 TSFTPKSY 271 +P + Sbjct: 276 YGVSPTKF 283 >UniRef50_A5N4U3 Predicted transcriptional regulator n=2 Tax=Clostridium kluyveri RepID=A5N4U3_CLOK5 Length = 298 Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats. Identities = 60/294 (20%), Positives = 107/294 (36%), Gaps = 20/294 (6%) Query: 1 MMQPVINAPEIATAREQQLFNGKNFHVFIYNKT--ESISGLHQHDYYEFTLVLTGRYFQE 58 M N ++ E Q F + Y + H H+ +E V++G Sbjct: 1 MSIAKCNVTVNSSGEEVQKHGTSEFPIAFYEENLSSYSIPWHWHEDFEIIWVISGSIKVS 60 Query: 59 INGKRVLLERGDFVFIPLGSHHQSFYEFGATRIL---------NVGISKRFFEQHYLPLL 109 +N +L + +FI G H +L I +++ + P++ Sbjct: 61 VNSTEHILNKNQGIFINAGFLHSIHATNDGEYVLRSIVFHPRLIGSIDSIYWQNYIEPII 120 Query: 110 PY----CFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQ 165 + + L Y +V + L E G E +V +I + Sbjct: 121 QNKNLPYILLDPFINWQDKILAYSISVWNRLYNTENGFEIYVRNELSQLILIVLTNHSIC 180 Query: 166 VIDDVPQWLKSTVEKM----HDKEQFSE-SALENMVALSAKSQEYLTRATQRYYGKTPMQ 220 + L++ + + FSE + + ++ S+ + R R TP Q Sbjct: 181 EAKPSIRNLRNADRIKTMLQYIQMHFSETITISTLARVALISESEVLRCFHRTIHSTPNQ 240 Query: 221 IINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 + + RI A + L T+ + DIAF+ G+ S S F KTF++ TP YRK+ Sbjct: 241 YLKQYRIQKACQMLIDTDMTSIDIAFQCGFQSSSYFTKTFREQIGCTPLEYRKR 294 >UniRef50_C6D3A6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3A6_PAESJ Length = 291 Score = 173 bits (440), Expect = 4e-42, Method: Composition-based stats. Identities = 63/285 (22%), Positives = 113/285 (39%), Gaps = 23/285 (8%) Query: 12 ATAREQQLFNGKNFHVFIYNKTESIS---GLHQHDYYEFTLVLTGRYFQEINGKRVLLER 68 + E + + +++ T I LH H+++E V +G I G+ + Sbjct: 3 SDLWENTVMTDPALPINVFHPTFGIGCSLPLHWHEHFELIYVESGEVLYTIGGQPFPTKP 62 Query: 69 GDFVFIPLGSHHQ--SFYEFGATRILNVGISKRFF---EQHYLPLLPY-----CFVASQV 118 GD +F+ G H S + + + E H + L+ +AS++ Sbjct: 63 GDMLFVNSGELHSAASLNPNEPFTVYALVFNPSILGLKEPHIVDLVAPYTNGMSMIASRI 122 Query: 119 YRTNNAFLTYVETVIS---SLNLRETGLEEFVEMVTFYVINRL-RHYREEQVIDDVPQWL 174 +T++ + +T + + G E V + L R + Q D Sbjct: 123 EQTDSLYPLLKQTTLRLAGEFEQKPRGYELAVRSYCQLLFTWLSREFTVMQRSDTEMNAF 182 Query: 175 KSTVEKMHDKEQFSES------ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRIN 228 ++ + + ES +E + S + R ++ G+T +Q +N RIN Sbjct: 183 RARTNRFKELLTRLESDVAERVTVEQAASFVHMSPYHFCRMFKKITGQTFVQYMNLNRIN 242 Query: 229 FAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 A+ L+ T SVTDIA E G SS + F K F++L +P+ RK Sbjct: 243 RAEYLLKNTAMSVTDIAAEIGCSSINSFSKLFRQLRGVSPRDLRK 287 >UniRef50_C3RLG7 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RLG7_9MOLU Length = 280 Score = 173 bits (440), Expect = 5e-42, Method: Composition-based stats. Identities = 57/253 (22%), Positives = 103/253 (40%), Gaps = 6/253 (2%) Query: 32 KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFY-EFGATR 90 + + S LH H + E V G +I ++ DFV I + H + Sbjct: 30 EGDWHSQLHSHHFTELFYVTKGCGGFKIGADEFNVQENDFVIINPNTMHTEVSRDRNPLE 89 Query: 91 ILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMV 150 + + I FE L Y Y+ N L Y+ ++ + ++ + + Sbjct: 90 YIVIAIDGISFEIPEDSLKDYISCNYANYK--NEILFYLNLMVKESQAKNELYDDMCQQL 147 Query: 151 T-FYVINRLRHYREEQVIDDVPQWLKS--TVEKMHDKEQFSESALENMVALSAKSQEYLT 207 +IN LR R + K ++ D+ E L+ + + ++ YL Sbjct: 148 MQVLLINILRLNRINVSLTQGKTIRKEIFMIKNYIDRNYHKEITLDTLAEKTHMNKFYLA 207 Query: 208 RATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFT 267 + G +P+ + + RI +K L T+ S++ I+ G+SS S F + FKK T+F+ Sbjct: 208 HEFKNDVGVSPISYLLQRRIYESKYLLRDTDLSISQISTILGFSSLSYFAQAFKKSTNFS 267 Query: 268 PKSYRKKLTEFNQ 280 P YRK ++N+ Sbjct: 268 PLQYRKNHQKYNK 280 >UniRef50_C6L914 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L914_9FIRM Length = 306 Score = 173 bits (439), Expect = 6e-42, Method: Composition-based stats. Identities = 66/310 (21%), Positives = 124/310 (40%), Gaps = 44/310 (14%) Query: 6 INAPEIATAREQQLFNGKNFHVFIYNKTESISG--------LHQHDYYEFTLVLTGRYFQ 57 + +I +E +L F Y + S H H+ E G + Sbjct: 1 MKHSDITPLKENRLHGTAAFPCACYQADSAASPAGTPFLAKHHWHEELEIIYFEQGCFHL 60 Query: 58 EINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFF---------EQHYLPL 108 EIN ++ +E F I G H + E R + S E+ PL Sbjct: 61 EINMEKYEIEEECFCLIKSGDLHYIYSE-KDYREMAFVFSLSMLRAFAADPVQEKLVQPL 119 Query: 109 LP-YCFVASQVYRTNNAFLTYVETVIS--------------SLNLRETGLEEFVEMVTFY 153 + +YR N F+ + R + L +++ Sbjct: 120 AEGSLSLPGLIYRQNPCFVILKREFLQIADAAGLPSGASNLRSQYRVSSLPQYMRA-KAS 178 Query: 154 VINRLRHYREEQVI-------DDVPQWLKSTVEKMHDKEQFSES-ALENMVALSAKSQEY 205 ++N + E+ ++ D +K T+ M +E +E ++ + A + +++Y Sbjct: 179 LLNIFAAFSEQNLLAVSQMPADRRVDTVKKTLSYM--QEHMTEKVTMQELAAQANMNEQY 236 Query: 206 LTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTS 265 R ++ G+ P+ +NE+RI +A + L+ T++SVT+IA E+G+++ F++TF+ + Sbjct: 237 FCRFFKKIIGRPPITYLNEMRIRYACRLLKETDHSVTEIALESGFNNLGNFMRTFRLVCG 296 Query: 266 FTPKSYRKKL 275 TP YRK L Sbjct: 297 CTPLQYRKGL 306 >UniRef50_C6D083 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D083_PAESJ Length = 291 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 57/253 (22%), Positives = 100/253 (39%), Gaps = 17/253 (6%) Query: 37 SGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH----QSFYEFGATRIL 92 G H H++ E T V G I G+ V +E G FIP+G H ++ + + Sbjct: 33 MGEHSHEFVEITYVSEGAGIHYIAGEAVPVEHGTLFFIPVGQSHVFRPKTPKKDRPLIVY 92 Query: 93 NVGISKRFFEQH-----YLPLLPYCFVAS-----QVYRTNNAFLTYVETVISSLNLRETG 142 N + + + Y + CF V + + + + Sbjct: 93 NCLLPASYLSELRDGFPYATEILDCFADEGLSWFSVKDSTGEYHAMFRELYQEFAAKPPA 152 Query: 143 LEEFVEMVTFYVINRLRHYREEQVID--DVPQWLK-STVEKMHDKEQFSESALENMVALS 199 + + ++ L ++ + + D PQWL D+ SE L + A + Sbjct: 153 YMAVLASLVMRILTGLYRHKLQIIAPAGDRPQWLSVDEAIAFIDRNYASELKLGELAAQA 212 Query: 200 AKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKT 259 S+ +R +R+ G + ++ + IR++ A + L + SV DIA GY+ F + Sbjct: 213 KLSERQFSRLFRRHTGMSLIEYVQSIRMDAACRLLTTRHSSVEDIAGAVGYADMKFFYRL 272 Query: 260 FKKLTSFTPKSYR 272 FKK T TP+ YR Sbjct: 273 FKKKTGVTPRQYR 285 >UniRef50_C0ECN2 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0ECN2_9CLOT Length = 334 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 61/260 (23%), Positives = 111/260 (42%), Gaps = 20/260 (7%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISK 98 +H+HDY+E V G + V +++GD + + H + E + N+ IS Sbjct: 74 MHRHDYFEMIYVYRGGFVNVFPDHTVRMKQGDIMLLNPNILHAPYVERDDDIVFNIFISN 133 Query: 99 RFFEQHYLPL-----LPYCFVASQVY--RTNNAFLTYVETVISSLNLRETGLEEFVEMVT 151 + +PL L F +Y + +L + + S+ L E +EE++E Sbjct: 134 PMIREKIIPLQKDNSLLISFFMEYLYFDSQDKKYLNFTDNSPDSILLTEKMIEEYIEQRP 193 Query: 152 FY----------VINRL-RHYREEQVIDDVPQ--WLKSTVEKMHDKEQFSESALENMVAL 198 FY + ++L R Y + ID +P+ S + + L+++ Sbjct: 194 FYQNMTDAYLVLLFSQLSRDYYKNHSIDVLPKNHHTLSYDIINYIGQNCRSITLDSLAKH 253 Query: 199 SAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIK 258 + YL+R ++ GKT QI+++ ++ A + T+ + DI G+ S FI+ Sbjct: 254 FQYTPNYLSRLIRQSTGKTFSQIVSQQKLQRAAGFITSTDMPIVDIGQIVGFYDVSHFIR 313 Query: 259 TFKKLTSFTPKSYRKKLTEF 278 +FKK TP YRK + Sbjct: 314 SFKKEYHLTPAEYRKTFSSL 333 >UniRef50_B4AEM1 Transcriptional regulator n=1 Tax=Bacillus pumilus ATCC 7061 RepID=B4AEM1_BACPU Length = 297 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 59/264 (22%), Positives = 118/264 (44%), Gaps = 16/264 (6%) Query: 25 FHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFY 84 +H I + LH HD ++F +L G IN + + L+ GD VFI G H + Sbjct: 28 YHTKICDHRSGHIPLHWHDEFQFVFILEGEAEFHINEETICLKEGDGVFINCGCLHMAKD 87 Query: 85 EFGATR-ILNVGISKRFFEQHYL------PLLPYC----FVASQVYRTNNAFLTYVETVI 133 G T L + +S F + L P + + ++ N ++T+ Sbjct: 88 ANGTTCTYLCLNVSPHFITANELFTTFVHPYMHASQTPYILLNRKDHWPNHIYQCIQTIQ 147 Query: 134 SSLNLRETGLEE--FVEMVTFY--VINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSE 189 ++ E ++++T + ++ + + D + +K + +H + + Sbjct: 148 RLIDETPAYYELELNIQLITMWKCLLQNGFQIKYDARQHDKNERMKPMLNWIH-QHYHEK 206 Query: 190 SALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAG 249 L+++ S+ R + KTP+ +NE R+ + L+ T++++T+IA++ G Sbjct: 207 VLLQDIARAGQLSRSECCRYFKDILKKTPLHYVNEYRVQQSLILLQETDFNITEIAYKVG 266 Query: 250 YSSPSLFIKTFKKLTSFTPKSYRK 273 ++S S FI FK++ + TP +YRK Sbjct: 267 FNSTSYFISMFKRIKNTTPLAYRK 290 >UniRef50_C0EGR3 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGR3_9CLOT Length = 345 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 104/260 (40%), Gaps = 21/260 (8%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISK 98 H HDY+E V +G F G+ + L +GD + + HQ + I N+ +SK Sbjct: 85 WHNHDYFEIIYVHSGSCFNRFQGETIKLCKGDILLLNPTILHQIYALHEEDHIFNIMLSK 144 Query: 99 RFFEQHYLPLLP-----YCFVASQVYR-------------TNNAFLTYVETVISSLNLRE 140 FE LL F + Y+ N+ + ++I+ ++ Sbjct: 145 SLFEGSMWQLLSGNKIINNFFVNYFYQMNKTKDYVHFRCSQNHLIEETITSLIAEYLGKK 204 Query: 141 TGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTV---EKMHDKEQFSESALENMVA 197 + ++ + L EQ + K + + + L + Sbjct: 205 PAYYQVIQSYLIILFAYLSRIYSEQHFIEQQDLEKIGILPDIISFIAQNYQSVTLTEIQN 264 Query: 198 LSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFI 257 + S Y +R + + GKT +I+++ ++N AK+ L TN ++TDIA + G++ Sbjct: 265 VFNYSSGYTSRLIKHHTGKTFSEIVHDFKLNHAKELLVSTNLNITDIAEKIGFNDSHYLN 324 Query: 258 KTFKKLTSFTPKSYRKKLTE 277 K FKK TP YR+ + + Sbjct: 325 KVFKKRFGITPTQYRRGMKK 344 >UniRef50_C9L4N0 Putative transcriptional regulator n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L4N0_RUMHA Length = 275 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 60/272 (22%), Positives = 114/272 (41%), Gaps = 16/272 (5%) Query: 14 AREQQLFNGKNFHVFIYNKTESIS----GLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 +EQ+ F +Y E + H HD E G Y +N ++ +E Sbjct: 8 LKEQKDHGTSLFPCALYEVCEEKNWSGVPHHWHDEMEILYFSKGSYTLFVNMEQFQIEEK 67 Query: 70 DFVFIPLGSHHQSFYEFGATR---ILN---VGISKRFFEQHYLPLLPYCFVASQVYR-TN 122 F FI G H +T + + +G + F Q P P + YR Sbjct: 68 CFYFIYPGELHAIVPHSDSTESALVFHPSLLGFEYKLFPQCLKPSNPAFSPFEKEYRKVF 127 Query: 123 NAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMH 182 + F + E +S+ ++G+ + +++ + + E+ D + +K+ ++ +H Sbjct: 128 HIFHQFPEDSLSARLFIQSGIFKMAGILSTF----PSLLQTERKTDMRIETIKTALDFLH 183 Query: 183 DKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 Q + + ++ +++Y R ++ GK+P+ +NE RI A L+ T+ + Sbjct: 184 SHYQ-EKLYIRDLALQVNMNEQYFCRFFKKVLGKSPITYLNEYRIKQACILLQTTDLPIM 242 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 ++ + G+ F+K FKK T TP YRKK Sbjct: 243 EVGMDCGFFHLGNFMKEFKKYTETTPLQYRKK 274 >UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IWY8_9BACL Length = 293 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 56/257 (21%), Positives = 100/257 (38%), Gaps = 17/257 (6%) Query: 35 SISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGAT---RI 91 S+ G H HD +E +++G I + + GD V IP+ H++ + Sbjct: 26 SMDGEHFHDAWEIYYLVSGERCYFIKDQIYRIGAGDLVLIPVNVLHKTSPSGKLSQPHER 85 Query: 92 LNVGISKRFFEQHYL---PLLPYCFVASQVYRTNNAFLTYVETVISSLNLRET----GLE 144 + V L F V R + V+ +++ + + G E Sbjct: 86 ILVNFRTEVVSALLPGREEELEQLFAKYPVLRLSAEEQQLVQQLLARMLAEQKQQAGGYE 145 Query: 145 EFVEMVTFYVINRLRHYREEQVIDD-------VPQWLKSTVEKMHDKEQFSESALENMVA 197 E+ +++ ++ L + D P + V + + +L ++ Sbjct: 146 EYCQLLLAELLLNLLRMANARPNHDGEEGGGKRPYREIAEVARYINAHYDENLSLSDLAN 205 Query: 198 LSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFI 257 S YL+ R G T + IN +RI A L T VT+IA+ GY S + F Sbjct: 206 RFHLSPYYLSHLFPRVTGLTLVAYINRVRIEEACALLRETELPVTEIAYRVGYQSGTHFG 265 Query: 258 KTFKKLTSFTPKSYRKK 274 + FKK + +P+SYR++ Sbjct: 266 RVFKKAKAVSPQSYRRE 282 >UniRef50_C5EQL5 Transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQL5_9FIRM Length = 290 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 58/249 (23%), Positives = 103/249 (41%), Gaps = 11/249 (4%) Query: 36 ISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG-ATRILNV 94 + H H YYE +L+G+ I+ L+ GD V IP H++ YE G ++ Sbjct: 34 MKRPHYHSYYEIYYLLSGQCRMFIDQDIYYLKPGDAVIIPPLQIHRALYEEGLQAERYDM 93 Query: 95 GISKRFFEQHYLPLLPYCF---VASQVYRTNNAFLTYVETVISSLNLRETGLEEFV---- 147 +K + + F + +E ++S L+ + + Sbjct: 94 YFTKEEADAFHASCGREGFERVFLNPRIAIPQPLRPGIEGLLSHLSHENGQEDAYSHVQQ 153 Query: 148 EMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM--HDKEQFSE-SALENMVALSAKSQE 204 + + F ++ + ++ Q D ++ + K + Q+ E L+ M A+S S Sbjct: 154 QSLLFQILVLIGRCQDTQQEKDSLNDSEAAIVKAARYINLQYREHLTLDAMAAMSNMSPT 213 Query: 205 YLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLT 264 Y +R + G + +N IR+ A L T+ +VT IA G+S + F FKKLT Sbjct: 214 YFSRKFRASTGFCFKEYVNYIRVQKASDLLRNTDGTVTSIAIACGFSDGNYFGDVFKKLT 273 Query: 265 SFTPKSYRK 273 +P+ YR Sbjct: 274 GLSPREYRN 282 >UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VRD3_9CLOT Length = 277 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 48/238 (20%), Positives = 96/238 (40%), Gaps = 7/238 (2%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKR 99 H HD+ E V G + GK+ L GD V + G+ H+ + A L + Sbjct: 38 HSHDFCEILYVAGGAGEAILEGKKFRLAPGDLVVVNPGTLHEERSDAKAPLRLIFLAIRD 97 Query: 100 F----FEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVE-MVTFYV 154 F L Y ++ YR Y+ ++ + + +E + +V+ + Sbjct: 98 FAVPGLPAGCLSQEKYRVLSCGEYRYKMDI--YLRELLQETSSQIEFYQEISQGLVSALL 155 Query: 155 INRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYY 214 + +R R + +++ D+ S L+++ S+ YL+ + Sbjct: 156 VLVMRLIRINPEDEAALSQECQKIKEYLDQNFTSPITLDSLSETVYISKHYLSHLFKEQT 215 Query: 215 GKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 G +P++ + R+ A + L T V++++ GY +P F + FK++ +P YR Sbjct: 216 GVSPIKYLTSKRMEKACELLSETELPVSEVSKAVGYENPLYFSQVFKRIYGISPVKYR 273 >UniRef50_C1I2I2 Transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I2I2_9CLOT Length = 295 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 70/285 (24%), Positives = 113/285 (39%), Gaps = 24/285 (8%) Query: 14 AREQQLFNGKNFHVFIYN---KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 +EQ + +YN + + H HD EF +L G I+ K + GD Sbjct: 9 LKEQVNHGNMQLPLEVYNVEFRNSADFYSHWHDEMEFIYILNGSAEICIDFKIFSVTTGD 68 Query: 71 FVFIPLGSHHQSF-YEFGATRILNVGISKRFFEQHYL---------PLLPYCFVASQVYR 120 F+ IP GS H E + + + E + L P++ + R Sbjct: 69 FIIIPNGSIHYMIGKENSKISYVALVFNLSLIEGNTLDYSQINFVNPIMKNKLFFKNIIR 128 Query: 121 TNN----AFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLR-------HYREEQVIDD 169 T+N + +I S N + G + ++ F + + + + E D Sbjct: 129 TSNVGHAKIVNSFNNIIESYNNKSYGFQLEIKGSLFSIFSTIFKEGYISLNLNSENYSDL 188 Query: 170 VPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINF 229 + V K + +++ + ++ S+ + R + GKT Q IN RI Sbjct: 189 IKVENLKEVIKYIQTNYKNPISIKELADIAQYSEYHFLRFFKAQTGKTCTQYINYFRIQK 248 Query: 230 AKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 A L TN S+T+IA+E G+ S FIKTFKK S +P YRK Sbjct: 249 ATLLLFDTNLSITEIAYEVGFGDVSYFIKTFKKFLSISPTKYRKS 293 >UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8RPA3_9CLOT Length = 339 Score = 172 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 50/284 (17%), Positives = 94/284 (33%), Gaps = 22/284 (7%) Query: 12 ATAREQQLFNGKNFHVFIYNKTESIS----GLHQHDYYEFTLVLTGRYFQEINGKRVLLE 67 E + G++F IY + +H H+ E V GR ++ + Sbjct: 52 YGYHEIKEHAGRDFPFNIYPCSIPADFRQVPVHWHEDMEIIAVKKGRGVVTVDMEPYEAR 111 Query: 68 RGDFVFIPLGSHHQSFYEFGAT-RILNVGISKRFFEQHYLPLLPYCFVASQVY------- 119 G+ V + G H N+ L Y F+ Sbjct: 112 AGEAVVVFPGQLHGISQCGSEAMEYENIIFLPSMLMSAESDLCTYDFLRPMTEGGIGKPL 171 Query: 120 ------RTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVI---DDV 170 AF+ + + + + V+ F+ + + + Sbjct: 172 HITGGLPDYGAFMECIGILDQLCGKKNYAYQMGVKGTLFWFLGLIAGIWGPEAAGQPRKS 231 Query: 171 PQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFA 230 + +K +E M ++ + +E+ L S + + ++Y G +Q +NE R+ A Sbjct: 232 RERMKRLLEYM-EEHYGEKITVEDGAELCFYSNSHFMKYFKQYMGVPFIQYLNEFRLEKA 290 Query: 231 KKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 L T VT +A G+ + S F + F++ TP YRK Sbjct: 291 AGMLLTTPDPVTAVAQRCGFDNISYFNRLFRRKYGKTPGEYRKN 334 >UniRef50_C6LHD5 Putative transcriptional regulator YfiF n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LHD5_9FIRM Length = 288 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 101/248 (40%), Gaps = 8/248 (3%) Query: 33 TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG-ATRI 91 +++ H H+YYE + G + + ++ G+ + H+S+ E + Sbjct: 36 NDNMMKSHYHNYYEIYYLEDGERYHMMQDDMYDMKPGELILFSPYIMHRSYGENDMPFKR 95 Query: 92 LNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVE--- 148 + + LL + +YR + A + ++ L + +F + Sbjct: 96 IVLYFESSEVASK--ELLDALDENNGMYRPDAATRQKLHRMLEELIRQYENPSDFYKSYR 153 Query: 149 --MVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYL 206 ++ ++ L H R + + + + LE + SQ YL Sbjct: 154 RTLLNMFLFTMLMHTRRREPEQMEETGRTTQIVSYIHSHYQEDITLEQLAQKFYVSQFYL 213 Query: 207 TRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSF 266 R +RY T +Q +N R+ A+++L T+ ++T+I+ E G+S+ + F + FK +T Sbjct: 214 CREFKRYTNSTVVQYVNVTRVMNAQRKLMETDKTITEISRETGFSNLTHFNRVFKSVTGT 273 Query: 267 TPKSYRKK 274 TP YRK Sbjct: 274 TPSGYRKH 281 >UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ERJ9_9FIRM Length = 294 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 51/279 (18%), Positives = 103/279 (36%), Gaps = 21/279 (7%) Query: 15 REQQLFNGKNFHVFIYNKTESIS----GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 E ++ +F Y + + LH HD E ++ G ++ + GD Sbjct: 15 HENKIHTPDDFPYNTYLCSIPLDFQSVNLHWHDEVEIIVIKKGSGIVSVDLTTYSVSAGD 74 Query: 71 FVFIPLGSHHQSFYEFGAT-RILNVGISKRFFEQHYLPLLPYCFVASQVYRTNN------ 123 +F+ G H + N+ + L F+ + N Sbjct: 75 IIFVLPGQLHAISQKDNEIMEYENILFKSSLLKSSGYDLCNDKFIQPLFSGSLNICPVIN 134 Query: 124 -------AFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKS 176 +T + + +LR + ++ F ++ L + I + Q Sbjct: 135 NQTPYYPPVITAINEIDHLCDLRPYAYQLSIKAHLFQILYTLVSNCGQNKIKPINQKSLK 194 Query: 177 TVEKM--HDKEQFSE-SALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQ 233 ++ + + F E A+E++ S+ Y + + G + +Q +N+ R+ A + Sbjct: 195 KIKTILSYIANNFQENIAIEDIANYCFYSKSYFMKFFKETMGVSFIQYLNDYRLEIAAEL 254 Query: 234 LEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 L T ++ DIAF G+++ S F + FKK +P+ YR Sbjct: 255 LTTTTDNILDIAFATGFNNISYFNRCFKKKYGVSPRKYR 293 >UniRef50_C9KMM0 Putative AraC-type DNA-binding domain-containing protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMM0_9FIRM Length = 248 Score = 171 bits (433), Expect = 3e-41, Method: Composition-based stats. Identities = 62/248 (25%), Positives = 97/248 (39%), Gaps = 15/248 (6%) Query: 39 LHQH-DYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGIS 97 +HQH D E LV GR I+ L GD +F G H G +G+S Sbjct: 1 MHQHEDRAEIILVTGGRGSFNIDTGHYLASPGDVLFFDSGILHDETTIDGDLATSCLGVS 60 Query: 98 KRFFEQHYLPLL------PYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVT 151 + P + +Q F T V+ ++ ++ +T Sbjct: 61 DFQLPGRRANEMVGRLYAPQLSLDAQFDAVRTLFHTAVQLALAG------DAPCVLDQLT 114 Query: 152 FYVINRLRHYREEQVIDDVPQW--LKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRA 209 ++ +L PQ L TV+ D L+++ A + YL A Sbjct: 115 CAILCKLDEELARHGQPPRPQQESLGLTVKAYIDAHYRESITLQSIAAELNFNPYYLAHA 174 Query: 210 TQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPK 269 + + G +PMQ I RI A+ L T+ S+T+IAF GY++ + F FK+L TP Sbjct: 175 FREHIGYSPMQYIIRRRIGEAQNLLIGTDRSITEIAFSCGYNNSNYFQSVFKRLVGMTPG 234 Query: 270 SYRKKLTE 277 YR+ + Sbjct: 235 QYRRDWVQ 242 >UniRef50_A9KRL7 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KRL7_CLOPH Length = 283 Score = 170 bits (432), Expect = 3e-41, Method: Composition-based stats. Identities = 58/264 (21%), Positives = 106/264 (40%), Gaps = 10/264 (3%) Query: 24 NFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSF 83 +H + + H H YE +L G + + G LL++ D FI G H Sbjct: 20 EYHYVDHTHPQYEMPFHWHIEYEIIRILDGEFRLFLEGTEYLLKKDDVAFIKDGKLHGGS 79 Query: 84 YEFGATRILNVGIS----KRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLR 139 + + + + F +L + + ++ + + T+ ++ Sbjct: 80 PKDCTYECIVFDFNILRQRSFLTDTFLRKIAHQKISIYPVHNKTCITSPLITMFDAIRSE 139 Query: 140 ETGLEEFVE---MVTFYVINRLRHYREEQVIDDVPQWLKSTVE---KMHDKEQFSESALE 193 E G E + ++ F + + +Y +E+ D Q ++ ++ + L+ Sbjct: 140 EEGYELSILGSLLLFFAALQKNEYYSKEEEYDLKSQKAIEQLKASLELIVTDYAKPLTLQ 199 Query: 194 NMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSP 253 + S +Y R Q Y +TP+ +N RI A Q+ + ++TDIAF G++ Sbjct: 200 ELSRECGLSPKYFCRFFQEYTNRTPIDYLNYYRIEQACYQISQSEDTLTDIAFRCGFNDF 259 Query: 254 SLFIKTFKKLTSFTPKSYRKKLTE 277 S FIKTFKK TPK Y+ E Sbjct: 260 SYFIKTFKKYKGITPKKYQMMWKE 283 >UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C353D2 Length = 286 Score = 170 bits (432), Expect = 3e-41, Method: Composition-based stats. Identities = 53/275 (19%), Positives = 96/275 (34%), Gaps = 16/275 (5%) Query: 15 REQQLFNGKNFHVFIYNKTESIS----GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 +E + +F Y+ TES H H+ E +++G + IN GD Sbjct: 7 KEIKHHGTADFPAGYYHVTESHPQYAMPYHWHEELELIHIISGTFHVTINETTRNAVPGD 66 Query: 71 FVFIPLGSHHQSFYEFGATRILNV---GISKRFFEQHYLPLLPYCFVASQVY---RTNNA 124 + + G H L +S + + +L L + Y + A Sbjct: 67 ILLVNSGGLHGGTPYDCVYECLVFPVSLLSSQTYASEFLNRLDRQDLILDEYFPAGDDTA 126 Query: 125 FLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDV------PQWLKSTV 178 + +E + + + + G + + + + L R D +L V Sbjct: 127 IHSLLERLFALMQDSDEGGKLQCLGLLYQFMGLLLQDRRYTASDKSDLSTHRNIYLLKNV 186 Query: 179 EKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTN 238 + + L + + S +Y G+TP+ +N R+ A L Sbjct: 187 LNYIEAHYTEKITLHELARTAGMSSKYFCHFFSEMTGRTPIDYVNYYRVERACCLLAGIG 246 Query: 239 YSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 +S+TDIA G++ S F + FKK +P Y K Sbjct: 247 HSITDIAMLCGFNDVSYFTRAFKKYKGISPGQYLK 281 >UniRef50_C6JCU7 Transcriptional regulator n=3 Tax=Ruminococcus RepID=C6JCU7_9FIRM Length = 282 Score = 170 bits (432), Expect = 3e-41, Method: Composition-based stats. Identities = 55/264 (20%), Positives = 103/264 (39%), Gaps = 14/264 (5%) Query: 24 NFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSF 83 FH + + H H YE +L G ++ K + D +F+ G H Sbjct: 20 EFHHIDHTHPRYVMSYHWHVEYEIIRILEGSLTVTLDEKSFTAVKNDVIFVHSGILHSGI 79 Query: 84 YEFGATRILNVGISKRF-----FEQHYLPLLPY-CFVASQVYRTNNAFLTYVETVISSLN 137 + + ++ ++ +L + + L + + ++ Sbjct: 80 PHDCVYQCIVFDMNTFLKNNPVCGEYIQKILHQETMLFPHFSDEHPQILNCISVLFDAMY 139 Query: 138 LRETGLEEFVEMVTFYVINRL--RHYREEQVIDDVPQW-----LKSTVEKMHDKEQFSES 190 ++TG E V ++ + HY E + LK +E + +K + Sbjct: 140 EKDTGYELTVFGQFYHFFGLIFSNHYFIENPTRTRRDYKRILQLKQVLEFI-EKNYANPI 198 Query: 191 ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGY 250 L+ + A + S +Y R +TP+ +N RI A QL T+ S+T+IA+ G+ Sbjct: 199 TLQELSASVSMSPKYFCRFFSEMTHQTPVDYLNRQRIEEACLQLAATDDSITEIAYRNGF 258 Query: 251 SSPSLFIKTFKKLTSFTPKSYRKK 274 + S FI+TFKK TP Y+++ Sbjct: 259 NDLSYFIRTFKKYKGMTPGKYKRR 282 >UniRef50_C6D8V3 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8V3_PAESJ Length = 309 Score = 170 bits (432), Expect = 3e-41, Method: Composition-based stats. Identities = 63/287 (21%), Positives = 118/287 (41%), Gaps = 35/287 (12%) Query: 9 PEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLER 68 P+I +Q ++FH+ G HQHD+ EF V++G E N + + + Sbjct: 19 PKIMAYYYKQW---EDFHM----------GFHQHDWTEFMYVISGNCTVETNKDVIAMRK 65 Query: 69 GDFVFIPLGSHHQSFYEFG-ATRILNVGISKRFFEQHYL---------PLLPYCF---VA 115 GD + + G H+ E G R+LNV + + Y P+ + Sbjct: 66 GDLIMLDAGVPHRLIVESGSPCRMLNVEFGFQPCDGIYPSMNQLANHNPMFSKLLEQRLD 125 Query: 116 SQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLR--------HYREEQVI 167 + V R + ++ L+L G E+ EM+T ++++L + Sbjct: 126 TIVLRDYEDIQVNLRNLVFELDLGGEGKEQGREMMTNLLMSQLLVRVGRLVAVEAKNSTE 185 Query: 168 DDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRI 227 + +++ E +H + + +++ A YL R + KT + + ++R+ Sbjct: 186 RQIHHYVRQATEYIH-QYYDTAIQAKDIAAAVNLHPVYLQRIFKSNMNKTINEYLVDLRM 244 Query: 228 NFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 + AK L T+ + ++A G +S F FKK+T +P YRK Sbjct: 245 DKAKMLLARTDVPIIEVADHIGLNSRQYFSMLFKKMTGISPAEYRKS 291 >UniRef50_B1R0P6 Transcriptional regulator, AraC family protein n=2 Tax=Clostridium butyricum RepID=B1R0P6_CLOBU Length = 297 Score = 170 bits (432), Expect = 4e-41, Method: Composition-based stats. Identities = 60/295 (20%), Positives = 106/295 (35%), Gaps = 21/295 (7%) Query: 1 MMQPVINAPEIATAREQQLFNGKNFHVFIYNKT--ESISGLHQHDYYEFTLVLTGRYFQE 58 M + N RE F V Y+ + H HD +E +V G Sbjct: 1 MALSLCNTTTNEHGRELVEHGTVLFPVACYDDDLIKKSVPWHWHDEFEAVIVSEGTALIA 60 Query: 59 INGKRVLLERGDFVFIPLGSHHQSFYEFGA----------TRILNVGISKRFFEQHYLPL 108 K+ L++G+ +FI G H ++ + + R++ I F+ + PL Sbjct: 61 AGTKKYTLKQGEGIFINAGILHAAWSKNCSICHLHSITFHPRLIGGSIDSIFWHNYVQPL 120 Query: 109 LPYCFV----ASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREE 164 L V + +E+ +S G E V +I L Y Sbjct: 121 LTNPIVKHIHLDSSEAWHKEATHAIESAWNSCANEPFGYEFQVHSSLSQLILHLSAYHPV 180 Query: 165 QVIDDVPQWLKST-----VEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPM 219 + L+++ + + + + + + S+ R + G P+ Sbjct: 181 ISRQPSEKVLRNSNRLKLMLQFIQDHYHDQINVSMIADTAMISESECLRCFRNIIGIPPI 240 Query: 220 QIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 Q + + RI A + L TN ++T I + G+ S F+KTF++ TP YRK Sbjct: 241 QYLKQFRIQKAVEFLTSTNETITKIGAKCGFQDTSYFVKTFREQKKCTPSEYRKN 295 >UniRef50_UPI0001788F57 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788F57 Length = 292 Score = 170 bits (432), Expect = 4e-41, Method: Composition-based stats. Identities = 58/293 (19%), Positives = 111/293 (37%), Gaps = 29/293 (9%) Query: 8 APEIATAREQQLFNGKNFHVFIYNK---TESISGLHQHDYYEFTLVLTGRYFQEINGKRV 64 E A +E+ + KN+ +F+ + T LH H+ E + +G + ING++ Sbjct: 5 MREEAIPKEKVIL-AKNYPIFVADTIGVTSPYQKLHWHNVLEINYIKSGMGYYIINGQKF 63 Query: 65 LLERGDFVFIPLGSHHQSFYE----------FGATRILNVGISKRFFEQHYLPLLPYCFV 114 ++GD + I H ++ I N+ F P Sbjct: 64 EFQQGDVLLINSNDLHCAYETKDLVMTVISFDSTWFIHNLRFDPELFS----PFREMGKH 119 Query: 115 ASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRL-----RHYREEQVIDD 169 + ++ + + +++ L G + V + ++ + R R E Sbjct: 120 YMNLIPRDHPAMGKLRSLLFELQEEHVGEQRSYATVVYSLLLQFLATVNRQCRIEGEGGS 179 Query: 170 VPQWLKSTVEKM------HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIIN 223 P + +EKM ++ LE + +L S + +R G P+ + Sbjct: 180 EPSISERQLEKMRQVIMVMEQNFAHPWTLEELASLVYLSPSRFSEIFKRAVGMPPLLYLI 239 Query: 224 EIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 IR+ A LE + V D+A E G+ + + F + FKK TPK+ +K+ + Sbjct: 240 HIRLEQAVTMLEGGHMKVMDVALECGFRTLTNFNRLFKKHIGMTPKASQKQHS 292 >UniRef50_C4GA22 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GA22_9FIRM Length = 279 Score = 170 bits (431), Expect = 4e-41, Method: Composition-based stats. Identities = 53/264 (20%), Positives = 113/264 (42%), Gaps = 7/264 (2%) Query: 19 LFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGS 78 + G + +E++ H H YYE + G ++ + E G+ + P S Sbjct: 9 IEQGADIAAERVRSSENMMKSHYHTYYELYYLEEGCRLHAVSDQIYRTEAGEMILFPPYS 68 Query: 79 HHQSF--YEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSL 136 H S+ E A + + V +++ L L+ A +Y + + ++ + Sbjct: 69 MHHSYAPSEDQAFQRIVVYFTEKAIGD--LTLIEKMRHAGGLYHPDRRMSHQIHGLLGMM 126 Query: 137 NLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHD---KEQFSESALE 193 + ++ ++ ++ ++ + + V P KS V K+ + + L+ Sbjct: 127 LMEQSETDDLHDITMETILRAILLLLLKDVRTLNPTVNKSRVIKVIEYISDHYMEDLRLD 186 Query: 194 NMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSP 253 + SQ YL R ++Y +T Q IN RI A++++ TN+ + +A G++S Sbjct: 187 ELAGRFYVSQYYLCREFKKYTSRTINQYINTTRILNAQREIMETNHPFSQVAANCGFASS 246 Query: 254 SLFIKTFKKLTSFTPKSYRKKLTE 277 + F + F+ +T TP ++RK ++ Sbjct: 247 THFSRVFRSVTGMTPTAFRKSCSQ 270 >UniRef50_B6FM02 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B6FM02_9CLOT Length = 294 Score = 170 bits (431), Expect = 5e-41, Method: Composition-based stats. Identities = 47/255 (18%), Positives = 100/255 (39%), Gaps = 16/255 (6%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKR 99 H H++ + ++G E ++ D V + H + Sbjct: 34 HWHEHLQVYYFISGTAKLECGKNNFEVQANDLVIVNPNELHYLESTSDNLVFYTIRFEPS 93 Query: 100 FFEQHYLPLLPYCFVA---------SQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMV 150 F +++ LL ++ + + + N V+ V+ ++ G E ++ Sbjct: 94 FLFSNHVDLLQTKYLTPITLNRIEFNNLIQNNTELTELVKKVLMEYFNKKIGYELAIKGY 153 Query: 151 TFYVI-----NRLRHYREEQVIDDVPQWLK--STVEKMHDKEQFSESALENMVALSAKSQ 203 +Y++ N ++H + +DD L ++ +K+ + L + S Sbjct: 154 IYYLVVTLLRNHVQHILTQSELDDKEATLIRFQPAFELIEKKYNEKITLSKLANTVGLSV 213 Query: 204 EYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKL 263 + R+ ++ GKT IN IR++ + L+ T+Y++T+IA G+ + + F + FKK Sbjct: 214 HHFCRSFKQLTGKTTTDYINNIRLDKSIYYLKQTDYNITEIALMCGFENGNYFSRIFKKY 273 Query: 264 TSFTPKSYRKKLTEF 278 S +P YR Sbjct: 274 HSTSPSQYRNLYKNL 288 >UniRef50_A5GD53 Transcriptional regulator, AraC family n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5GD53_GEOUR Length = 291 Score = 170 bits (430), Expect = 6e-41, Method: Composition-based stats. Identities = 54/272 (19%), Positives = 102/272 (37%), Gaps = 10/272 (3%) Query: 14 AREQQLFNGKNFHVFIYNKTE---SISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 R F G VFI +I+ H H Y F L I GK VL + G Sbjct: 21 LRYVDCFIGNEIGVFIPAVGPCFYAITPDHSHPAYSFVLTFDSYTRLAIGGKTVLSQPGQ 80 Query: 71 FVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHY--LPLLPYCFVASQVYRTNNAFLTY 128 + I + H R + + I + FE+ P + + + + Sbjct: 81 IMAIDPDAVHHEMTADETPRYIAIFIDRDLFEKELGRYPSIRPRPFRFRTFTPGREMMGL 140 Query: 129 VETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQ----WLKSTVEKMHDK 184 ++ ++ R E + + +++ L + D + +E + Sbjct: 141 LKEFMNEAEARLPAREPLLAAIGTRIVHALIRAAHGIITPDASIGNRVEIHRVIEYIQT- 199 Query: 185 EQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDI 244 + ++ + A++A S + +R +R G P+ +N +R+ A+K L SVT + Sbjct: 200 HAGKKLSIGQLAAVAAMSTSHFSRIFKRETGHPPLAYLNRVRLEQARKLLRTGECSVTSV 259 Query: 245 AFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 A G++SPS F +F++ +P + K Sbjct: 260 ALSCGFASPSHFTDSFRRFYGQSPTDFLKSYK 291 >UniRef50_C5ET70 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ET70_9FIRM Length = 273 Score = 170 bits (430), Expect = 7e-41, Method: Composition-based stats. Identities = 46/246 (18%), Positives = 101/246 (41%), Gaps = 2/246 (0%) Query: 33 TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGAT-RI 91 ++++ H H+Y+E + +G+ + + L G+F+ P H S+ + G + + Sbjct: 16 NDNMAKSHYHEYFELYYLESGKRYHIADDTLYCLNSGEFILFPPYVMHHSYGDSGVSFKR 75 Query: 92 LNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVT 151 L + +K + + N + ++ + EE + + Sbjct: 76 LVLYFTKEMIAVPGVTDVLDQHAWVYKSDEKNETHALLRALLKEQEFNDNYSEEALYFIL 135 Query: 152 FYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQ 211 ++ L E + + S + +H+ + L + S YL R + Sbjct: 136 NQILILLLRNSTETAKPEKQSRITSIIHYLHENYTY-PITLNELAEQFYLSPYYLCREFK 194 Query: 212 RYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSY 271 +Y T +Q IN +R+ A++ T+ SVT+I+ G+S+ + F + ++ +T +P Sbjct: 195 KYTNSTIVQYINSLRVGHAQRLFMETDKSVTEISKIVGFSNVTHFNRVYRSVTGLSPSKS 254 Query: 272 RKKLTE 277 RK+ E Sbjct: 255 RKQAKE 260 >UniRef50_UPI0001788C0B transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788C0B Length = 288 Score = 170 bits (430), Expect = 7e-41, Method: Composition-based stats. Identities = 55/258 (21%), Positives = 102/258 (39%), Gaps = 16/258 (6%) Query: 35 SISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATR-ILN 93 S+S H HD+YE +L+G I + + GD VF+ + H++ L Sbjct: 28 SMSADHLHDHYELYYLLSGERIYFIKDRSYRVRAGDLVFVDRNAVHKTLDSGRPDHDRLV 87 Query: 94 VGISKRFFEQHYLP------LLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLE--- 144 + I+ F +P L + R + VE ++ + + Sbjct: 88 LYINPELFADLAVPPELAEGLKEPFGWDVPILRLPSPASEAVERMVGDMVNEMIHPQAGS 147 Query: 145 ------EFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVAL 198 VE++ F +R + V V + + L + Sbjct: 148 SWLLRHRTVELLLFAYRSRHLGMVRSADTEPVLHPKTQAVVRYLNDNYRQALTLPEVAEA 207 Query: 199 SAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIK 258 S YL+R ++ G T +N +R+ A++ L ++ S+TDIA+ +G+S+ S F K Sbjct: 208 FRISPHYLSRLFKQTTGFTFSDYLNLLRVKEAQRLLRESDDSITDIAWRSGFSNFSHFGK 267 Query: 259 TFKKLTSFTPKSYRKKLT 276 FK+ +P++YR++ Sbjct: 268 MFKRTVQLSPRAYRQQYR 285 >UniRef50_A8SGH8 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A8SGH8_9FIRM Length = 288 Score = 169 bits (429), Expect = 7e-41, Method: Composition-based stats. Identities = 49/243 (20%), Positives = 95/243 (39%), Gaps = 2/243 (0%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFY-EFGATRILNVGISK 98 H H E L+G + G+ ++ D V + H + +G++ Sbjct: 37 HTHSCTELFYCLSGEGQFYLAGQLFPVKPDDMVIVNPQVEHTELSLNASPLEYIVLGVAS 96 Query: 99 RFFEQHYLPLLPYCF-VASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINR 157 F F R + SL+ ET ++ +E++ +++ Sbjct: 97 MEFLFSKADTNYAIFNCRENRERMVTLLHMLLAEADRSLDGCETVCQDLLEVLLIWLVRC 156 Query: 158 LRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKT 217 + + + +++ D + +L+ + L+ ++ YL QR YG + Sbjct: 157 TTISLQLEEAAPTENRECAEIKRYLDTNYREDISLDLLAELAHLNKYYLAHTFQREYGIS 216 Query: 218 PMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 P+ +N RI +K L T YS+ I+ G+SSPS F + F+K TP YR++ + Sbjct: 217 PITYLNRRRIEESKHMLGNTGYSLAQISELMGFSSPSYFSQCFRKAEGMTPNEYRRQTRQ 276 Query: 278 FNQ 280 + Sbjct: 277 GKR 279 >UniRef50_B1HRT8 Hypothetical transcriptional regulator (AraC/XylS family) n=2 Tax=Bacillaceae RepID=B1HRT8_LYSSC Length = 294 Score = 169 bits (429), Expect = 8e-41, Method: Composition-based stats. Identities = 63/295 (21%), Positives = 114/295 (38%), Gaps = 22/295 (7%) Query: 1 MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTESIS-----GLHQHDYYEFTLVLTGRY 55 M P+ + +E L K F V +Y T ++ LH H +F + +G Sbjct: 1 MRLPLTHIKIAKDLQELTLHGSKEFPVALYETTMNMDSMDFLPLHWHKEIQFVYLKSGCA 60 Query: 56 FQEINGKRVLLERGDFVFIPLGSHHQ---------SFYEFGATRILNVGISKRFFEQHYL 106 + ++LE G+ +FI H+ Y I+ G F +Y+ Sbjct: 61 KYRVGANVLVLEEGEGLFINTSELHEAKPFQMEHAIVYCINVDPIIIGGHDGSIFMTNYV 120 Query: 107 PLLPYCFVASQVY-RTNNAFLTYVETVISSLNLRETGLEEFV--EMVTFYVINRLRHYRE 163 PY Q Y + V + L +E + V E++ + + + Sbjct: 121 Q--PYLTTHRQPYLKLTKELTQKVACMADILQKQEAFYQLKVWRELLYIWEVMLTQSLLT 178 Query: 164 EQVIDD---VPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQ 220 E+++D V Q + + LE++ S+ +R ++ G TP Sbjct: 179 EEIVDPSIIVQQERAKAMLNFLHTHYQQKITLEDLAKHVYLSRAECSRYFKKVIGLTPFT 238 Query: 221 IINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 + + R+ + + L +VT IA G+S+ S +I+ FK+ T ++P YRKK Sbjct: 239 YLLQYRLRKSIELLRDDEQNVTIIAANTGFSTVSYYIEKFKEYTGYSPHVYRKKF 293 >UniRef50_C0EIX6 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIX6_9CLOT Length = 330 Score = 169 bits (429), Expect = 8e-41, Method: Composition-based stats. Identities = 51/270 (18%), Positives = 104/270 (38%), Gaps = 21/270 (7%) Query: 27 VFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEF 86 V ++ LH HD++E V G + L GD + + + H F Sbjct: 58 VSLHRGNHRDRYLHNHDFFELLYVYKGSCVNMTREGEMPLNEGDLLLLNPNALHAPFAPG 117 Query: 87 GATRILNVGISKRFFEQHYLPLLPYC-----FVASQVYRTN-------------NAFLTY 128 ++N+ + FE L L+ F + +Y N + Sbjct: 118 EENIVVNIIVRPSVFENVMLSLIADNKLFSNFFVNYLYHINMTTSYLYFPKDEEHPIKFI 177 Query: 129 VETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTV---EKMHDKE 185 ++ +I+ + ++ + + L + ++ + KS + H + Sbjct: 178 MDMLIAEYLSHDICYTNVMQAILVQLFAALARSYRKMNKVEIEDFEKSQLVVDIISHINQ 237 Query: 186 QFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIA 245 + L+ + S Y+++ Y GK +I++ +R++ AKK LE + ++T+I Sbjct: 238 NIATVTLKELSERFQYSSSYISKLINSYTGKNFSEIVHFLRLDRAKKYLENKDLTITEIT 297 Query: 246 FEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 G+S + F K FK + +P YRK++ Sbjct: 298 QAVGFSDSNYFYKVFKNRFNLSPSEYRKQV 327 >UniRef50_B0MH78 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MH78_9FIRM Length = 307 Score = 169 bits (429), Expect = 8e-41, Method: Composition-based stats. Identities = 54/286 (18%), Positives = 100/286 (34%), Gaps = 22/286 (7%) Query: 15 REQQLFNGKNFHVFIYN-----KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 RE F Y+ + H H+ E + +G + GKR + G Sbjct: 15 REVCPHGTIEFPCAGYDSVYSSHAINRIPWHWHEELEVIFLPSGTLDVRVPGKRFRMNAG 74 Query: 70 DFVFIPLGSHHQSFYEFGA--------TRILNVGISKRFFEQHYLPLLPYCFVASQVYRT 121 D + I H++ T +++ S F++++ PL+ C + ++ Sbjct: 75 DCLVINSNILHEAETSNECRLHSLVFHTDLISGSDSSVFYKKYMYPLISSCTLDCVLFSA 134 Query: 122 NN----AFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVID-----DVPQ 172 + + +L G E V + L + + ++ D D Sbjct: 135 EDTSGVSIRQCFMMAFDALANNREGYEFTVRECLSRLCFLLCTFYKPEISDTSAKPDQDS 194 Query: 173 WLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKK 232 + + M L ++ + + R R G +PMQ + R++ Sbjct: 195 FRIKEMIHMIQSRYAEPLKLCDIAQAANIGERECLRCFHRTLGISPMQYLIRYRLSKGAL 254 Query: 233 QLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEF 278 L TN S+ +I+ G+ SPS F TFK+ +P+ YRK Sbjct: 255 LLINTNKSIAEISTRCGFDSPSNFSLTFKRKYQCSPREYRKNNKTL 300 >UniRef50_Q5WL10 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WL10_BACSK Length = 298 Score = 169 bits (429), Expect = 9e-41, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 105/260 (40%), Gaps = 15/260 (5%) Query: 28 FIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG 87 + + H H+ E VL+G E + L++G +F+ G+ H+ Sbjct: 21 YYKEWRQFEMKFHSHEAAECMHVLSGSCKVETDEGSYQLKKGQIIFLDAGTRHRLIV-SE 79 Query: 88 ATRILNVGISKRFFEQHYLPLLPYC----FVASQVYRTNNAFL--------TYVETVISS 135 R+ NV S + P C + + V + + L + +I Sbjct: 80 RCRMFNVEFSFEQGCTAFPPFFKLCKENRALGNMVNKQASQLLLHDTDDTYQCLRRLILE 139 Query: 136 LNLRETGLEEFVEMVTFYVINRLRHYREEQVID-DVPQWLKSTVEKMHDKEQFSESALEN 194 ++ + + V+++ + R+ E +V + D ++K + +H E ++ + Sbjct: 140 VDKKSEQTDFMVQLLLSEYLIRIAELAEAKVAEPDQQAYVKRALAYIHQNYD-REVSVAD 198 Query: 195 MVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPS 254 + YL R + + GK+ + + RIN AK L+ T+ S+TDI G +S Sbjct: 199 IANSVHLHPGYLQRVFKAFTGKSIHEFLISYRINKAKAMLKQTDISITDIPHYIGMNSQQ 258 Query: 255 LFIKTFKKLTSFTPKSYRKK 274 F TFKK TP YRK+ Sbjct: 259 YFSTTFKKHVKCTPSEYRKR 278 >UniRef50_Q5WCU1 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WCU1_BACSK Length = 308 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 64/292 (21%), Positives = 121/292 (41%), Gaps = 27/292 (9%) Query: 13 TAREQQLFNGKNF------HVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLL 66 A ++QL +G + H+ I+ H HD E +GR ++G+ L+ Sbjct: 6 DAYKEQLPSGNDIREPIHCHMQTSEPNRRIASPHFHDAIELLYSFSGRARVFVSGQPFLM 65 Query: 67 ERGDFVFIPLGSHHQSFYEFGA-TRILNVGISKR--------FFEQHYLPLLPYCFVASQ 117 E+GD V I H + E G L + + FE Y+ + Q Sbjct: 66 EKGDLVIINSNEVHAIWGESGEKVEYLVIKLDPEVLYSTSRSIFESKYVFPFTMSKSSPQ 125 Query: 118 VYRTNNAFLTY-----VETVISSLNLRETGLEEFVEM-VTFYVINRLRHYREE------Q 165 + + + + + ++ G + + + + + LRH+R+ + Sbjct: 126 TLLKSGEMASTVIPATIAKINDEFSHKDYGYDFAIRIHICTIFLAVLRHWRQSGISVGTE 185 Query: 166 VIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEI 225 I+D L V ++ + + + A S Y +R + G++ +++N I Sbjct: 186 SINDSDFQLMRQVFQLLESHYATALTAKQAAATCNLSYSYFSRKIKSITGRSFTELLNYI 245 Query: 226 RINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 RI A+K L T+ S+T++A GYSS S FI+ FK+ +P ++K+L + Sbjct: 246 RITEAEKLLTTTDLSITEVAVSVGYSSTSYFIQHFKQAKHLSPLRFKKRLQQ 297 >UniRef50_UPI0001C35241 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35241 Length = 275 Score = 168 bits (427), Expect = 1e-40, Method: Composition-based stats. Identities = 61/260 (23%), Positives = 104/260 (40%), Gaps = 21/260 (8%) Query: 38 GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGIS 97 LH H+ E TL+ +G + +I+ + +E+GD + I H + G + + + + Sbjct: 9 SLHWHEEMEITLIKSGTIYYDIDFETFSVEKGDLLLISPHILHSAHEMPGKSMVSDSLVF 68 Query: 98 KRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVE--------------TVISSLNLRETGL 143 F + +P + V FL V+ +++ N ++ G Sbjct: 69 HLDFLGYQVPDACTIKFLNPVQSGKLRFLPVVKPGAAGYEEMKECFISLLECFNGKQYGY 128 Query: 144 EEFVEMVTFYVINRLRHY----REEQVIDD--VPQWLKSTVEKMHDKEQFSESALENMVA 197 E + + + + L Y + E + + LK + + +E + + Sbjct: 129 ELYTKELLMRLFRLLYQYGCVAKHEGTHGEFGAEEKLKEVLSYIQSN-YRETLTIEELSS 187 Query: 198 LSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFI 257 + SQ + +RY G T M+ IN RI A L T V DIA E G+ + S F Sbjct: 188 VCHFSQTHFMNFFKRYAGMTCMEYINHYRITRAAADLVETERQVMDIAMENGFRNISYFN 247 Query: 258 KTFKKLTSFTPKSYRKKLTE 277 K FK+ TP SYRK E Sbjct: 248 KVFKERFGVTPGSYRKNSRE 267 >UniRef50_UPI000178921D transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178921D Length = 318 Score = 168 bits (427), Expect = 1e-40, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 90/248 (36%), Gaps = 14/248 (5%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISK 98 LH H E + G F ING ++ +GD +FI H++ YE + + Sbjct: 56 LHWHHALELNYIQGGTGFILINGMKLPFRQGDIIFINSNDLHRA-YETENLVMDVIMFEP 114 Query: 99 RFF--EQHYLPLLPYCFVA----SQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTF 152 + + P L F + + ++ + ++ R T + Sbjct: 115 SLLSIDLKFDPDLMAPFRSLGNVDRQSPVHDELARLLRRMMEEYKARGTSYMSLIRSDLI 174 Query: 153 YVINRLRHYREEQVIDDVP------QWLKSTVEKMHDKEQFSESALENMVALSAKSQEYL 206 ++ + + P LK + M + L+ + L+ S Sbjct: 175 RFLSLANRHLSSPAQEHRPIKGRGMHALKEVLRTMELHLDYG-WTLQELSDLTHLSPSRF 233 Query: 207 TRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSF 266 + Q+ G +P + ++R+ A LE T+ + +IA G+ + S F + FK+ Sbjct: 234 SALFQQAVGTSPHHYLIQLRLTHAVHLLETTDQKIIEIAETCGFRNLSNFNRLFKQHVGA 293 Query: 267 TPKSYRKK 274 +P R++ Sbjct: 294 SPSEIRER 301 >UniRef50_A7B0D2 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0D2_RUMGN Length = 270 Score = 168 bits (427), Expect = 1e-40, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 104/248 (41%), Gaps = 5/248 (2%) Query: 33 TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG-ATRI 91 ++++ H HD++E +L G I G+ L DFV P H S+ E + Sbjct: 24 NDNMTQSHFHDFFELYYLLEGERMHMIEGEIYHLTANDFVLFPPHIMHHSYGEKDMPFKR 83 Query: 92 LNVGISKRFFEQHYL--PLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEM 149 + + S + L + N L+ + ++ +++ + ++ Sbjct: 84 IVLYFSPDLIANDTICQLLSEKELLFVNEGYIPNQILSLLLSLTHEIDVPGKYHDAYICN 143 Query: 150 VTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRA 209 ++ + E V V+ +H + ++ + + S +L Sbjct: 144 QLNGLLLNMLRLDFEAVKSIPKTRSAKAVDYIH-NHYMEDISVNQLAEILYVSPYHLCHE 202 Query: 210 TQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPK 269 + GKT +Q +N RI A++ + T+Y++T I+ E G+S+ + F +TFKK+T P+ Sbjct: 203 FKNATGKTIIQYLNTTRILHAQRLMLETDYNITQISREVGFSNLTHFNRTFKKITGVAPR 262 Query: 270 SYRKKLTE 277 +KKL + Sbjct: 263 E-KKKLYQ 269 >UniRef50_D1N597 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N597_9BACT Length = 279 Score = 168 bits (427), Expect = 1e-40, Method: Composition-based stats. Identities = 54/262 (20%), Positives = 101/262 (38%), Gaps = 11/262 (4%) Query: 22 GKNFHVFIYN-KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH 80 + + ++ + GLH+HD +E + G IN + RGD + H Sbjct: 11 SPDLPLAVWPVQKAGAIGLHRHDCFELVFITRGTGLCRINDLSYPVLRGDVYILNPHDTH 70 Query: 81 QSFYEFGATRILNVGISKRFF--EQHYLPLLPY--CFVASQVYRTNN----AFLTYVETV 132 + + N+ + E PLL ++Y+ N A + + Sbjct: 71 -CYEMASSCTFYNILFRRELLQHEPALTPLLDDWESRTDRKLYQLENDETDAEEFRFQEI 129 Query: 133 ISSLNLRETGLEEFVEMVT-FYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESA 191 I L R G E V + +++ LR E+ I + S V + + S + Sbjct: 130 IVELKKRLPGYEAAVRALFAVFLVRLLRRGNCERHIPPGHRPSASKVFEYINAHLGSTIS 189 Query: 192 LENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 L + ++ S A +++ G + I +RI A++ LE ++ +IA G+ Sbjct: 190 LRELAGVAGMSTPAFAGAFRQWTGNSVPGHIGALRIRQARRLLEERKLTIGEIALRLGFY 249 Query: 252 SPSLFIKTFKKLTSFTPKSYRK 273 F + F+K T +P+ YR+ Sbjct: 250 DTCHFSRVFRKKTGLSPREYRQ 271 >UniRef50_C6JD68 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JD68_9FIRM Length = 311 Score = 168 bits (427), Expect = 1e-40, Method: Composition-based stats. Identities = 62/305 (20%), Positives = 114/305 (37%), Gaps = 36/305 (11%) Query: 12 ATAREQQLFNGKNFHVFIYNKTESISG----LHQHDYYEFTLVLTGRYFQEINGKRVLLE 67 +T +E ++ ++F Y I G H H+ E G + E+N +R + Sbjct: 7 STLKEIRVHGTQDFPCAFYQTGTRIKGNMVKHHWHEEVELLYFSGGEFCLEVNMERFNIS 66 Query: 68 RGDFVFIPLGSHHQSFYEFGATRILN-VGISKRFFEQHYL----------PLLPYCFVAS 116 F FI G H E + N V Y P+ Sbjct: 67 EECFYFINPGELHSISVEKNGGCVENAVVFHMDMLNSAYALDQIQTNLIQPVQNGSIQFP 126 Query: 117 QVYRTNNAFLTYVETVISSL-------NLRETGL-----------EEFVEMVTFYVINRL 158 + R N V + + RE + F++ ++ L Sbjct: 127 RCLRKNEPAFEPVRKSYEEIRNVFGGDSFRENYYDGEAVTDDITRQLFIKSALLRILAVL 186 Query: 159 RHYREEQVIDDVPQWLKSTVE--KMHDKEQFSE-SALENMVALSAKSQEYLTRATQRYYG 215 +V + T++ + +E + E + ++ L +++Y R ++ G Sbjct: 187 SANNLFEVTEKNHDHRIETIKTTLTYIQENYKEKIYIRDLAGLIGMNEQYFCRFFKKVIG 246 Query: 216 KTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 ++PM+ +NE RI A L+ ++ +VT+I E GY++ F++ F+K TS TP YR+ Sbjct: 247 RSPMEYVNEYRIKRAIHYLKESDLTVTEICLECGYNNLGNFLREFRKYTSTTPLQYRRHS 306 Query: 276 TEFNQ 280 + Q Sbjct: 307 LKETQ 311 >UniRef50_C6D8E9 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8E9_PAESJ Length = 294 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 59/295 (20%), Positives = 118/295 (40%), Gaps = 21/295 (7%) Query: 6 INAPEIATAREQQLFNGKNFHVFIYNKT-----ESISGLHQHDYYEFTLVLTGRYFQEIN 60 + + E+ +N KNF ++I T + + H H EF LVL G +N Sbjct: 1 MQLDVFSDLSERLNYNLKNFQLYIKKGTLMPFDKYAAACHWHPDLEFILVLDGYMNFFVN 60 Query: 61 GKRVLLERGDFVFIPLGSHHQSFYEFGATRILNV------------GISKRFFEQHYLPL 108 G+ VLLE+G +F+ H + V I K ++E+ + P Sbjct: 61 GETVLLEKGTGIFVSSKRLHYGYSPDKIDCSYIVVCIHPSLLGNEQWIGKEYWEEKFGPN 120 Query: 109 LPYCFVASQVYRTNNAFLTYVETVISSLNLRE---TGLEEFVEMVTFYVINRLRHYREEQ 165 V ++ + L + + ++ + L +T + +R+ +E Sbjct: 121 TEDFIVLTEHESWHKDALVSLNQLYEEMHATKRNPIRLLSIAMSLTANIGDRIGEKKEPT 180 Query: 166 VIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEI 225 ID ++ +H + + L+++ A + S+ +Y ++P + + Sbjct: 181 AIDPSWFYVWKMTAFIHGHFEH-KITLDDIAAAGSVSRSQCCILFGKYVEQSPNTYLMKY 239 Query: 226 RINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 RI + + L T+ S+++IA G+ S S + F+K P YR++ + +Q Sbjct: 240 RIKKSCELLSETDRSISEIAISCGFQSSSYYTFVFRKELGIVPNEYRRQYRDAHQ 294 >UniRef50_C7H5Z6 Transcription regulator, AraC family n=2 Tax=Ruminococcaceae RepID=C7H5Z6_9FIRM Length = 319 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 49/243 (20%), Positives = 96/243 (39%), Gaps = 2/243 (0%) Query: 37 SGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFY-EFGATRILNVG 95 S +H H E L+G ++G+ ++ D V + H + +G Sbjct: 65 STVHTHSCTELFYCLSGEGQFLLSGQLFPVKPDDMVIVNPQVEHTELSLNASPLEYIVLG 124 Query: 96 ISKRFFEQHYLPLLPYCF-VASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYV 154 +S F R + SL+ ET ++ +E++ ++ Sbjct: 125 VSGIEILFGKADSTYAIFNCRENRERMVTLLHMLLAEADRSLDGCETVCQDLLEVLLIWL 184 Query: 155 INRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYY 214 + + + +++ D E +L+ + ++ ++ YL Q+ Y Sbjct: 185 VRCTTLSLQVEESPRSDNRECVEIKRYLDNNYREEISLDTLAEVAHINKYYLAHTFQKAY 244 Query: 215 GKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 G +P+ +N RI +K L T YS+ I+ G+SSPS F + F+K TP YR++ Sbjct: 245 GISPITYLNRRRIEESKYMLGNTGYSLAQISELMGFSSPSYFSQCFRKAEGLTPNEYRRQ 304 Query: 275 LTE 277 + + Sbjct: 305 VRQ 307 >UniRef50_C0EGG6 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGG6_9CLOT Length = 334 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 57/264 (21%), Positives = 106/264 (40%), Gaps = 22/264 (8%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISK 98 H HD++E V G Q K + D + + + H + + N+ ISK Sbjct: 67 FHCHDFFEMIYVYRGNCLQRFPDKEFTMREHDLLLLNPYTIHAPYTIKNEDSVFNILISK 126 Query: 99 RFFEQHYLPLLPYC-----FVASQVYR-------------TNNAFLTYVETVISSLNLRE 140 FE+ L L+ F+ + +Y+ N L VE++I +E Sbjct: 127 TLFERSLLSLISDNRIFSEFIINCLYQSSKSNDYLYFPANENEPVLDLVESIIIEYLEKE 186 Query: 141 TGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKST----VEKMHDKEQFSESALENMV 196 ++ +E + +L ++ +V + K+T + E +LE++ Sbjct: 187 LSYQKVMEASLVLLFAKLSRIYHKRFSSEVLENQKNTQTIVSILAYINENAPNVSLESIS 246 Query: 197 ALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLF 256 S +L+R ++ GK QI+ + +I A+ LE + ++ +I +G+ S + F Sbjct: 247 ERFNYSTGHLSRMIHQFTGKPYSQIVQKFKIERARSYLENSELTIPEIMELSGFHSANYF 306 Query: 257 IKTFKKLTSFTPKSYRKKLTEFNQ 280 + FKK TP YR N+ Sbjct: 307 YRMFKKFYLMTPNEYRSNYAAANK 330 >UniRef50_C9KMM6 Putative AraC-type DNA-binding domain-containing protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMM6_9FIRM Length = 241 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 56/243 (23%), Positives = 103/243 (42%), Gaps = 8/243 (3%) Query: 39 LHQHDYY-EFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRI-LNVGI 96 +H+HD+ E LV G I+G+R ++G+ + + H F G+ + + I Sbjct: 1 MHEHDHLCELLLVSQGAGIYMIDGRRYTAQKGNLIIYNSRTVHDEFGGSGSNLVTYCIAI 60 Query: 97 SKRFFEQHYLP-LLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVI 155 + LLP + Q R + A V+++ ++ E +T +I Sbjct: 61 GGLRIDGLPADHLLPDGYCPVQPLRQHFA---EVQSLFDAIEKEAKSHAEIANYLTMALI 117 Query: 156 NRLRHYREEQVIDDVPQW--LKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRY 213 +L + E+ + + Q L + DK L ++ + + YL+ + Sbjct: 118 TKLAAFLREEGLQEEQQTPTLAARARAFIDKNYKEAIRLGDIATATHTNAYYLSHLFKAE 177 Query: 214 YGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 G +PM+ + RI A+ L T+ ++T IA + GY++ + F FK TP YR+ Sbjct: 178 IGLSPMKYVILRRIGEAQNLLINTDMTITQIAAQVGYNNSNYFQNVFKGALDMTPGEYRR 237 Query: 274 KLT 276 K T Sbjct: 238 KWT 240 >UniRef50_B6FJS0 Putative uncharacterized protein n=2 Tax=Clostridium RepID=B6FJS0_9CLOT Length = 313 Score = 167 bits (424), Expect = 3e-40, Method: Composition-based stats. Identities = 57/267 (21%), Positives = 104/267 (38%), Gaps = 20/267 (7%) Query: 29 IYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGA 88 I+ +H HD +FT V G ++ G+ +L+ G+ +FI G H + Sbjct: 46 IFPNGRGFHDVHWHDEIQFTYVSKGELTMQVEGREYVLKEGEALFINSGLIHVTTSISED 105 Query: 89 TRILNVGISKRFF---------EQHYLPLLPYCFVASQVY----RTNNAFLTYVETVISS 135 + ++ + + LP L ++ V + L+ + + Sbjct: 106 GQYEGFMFPEKLLGFFPGSRMEQNYVLPYLKSNVLSVCVLYRESAEDEKILSDIRNLREL 165 Query: 136 LNLRE----TGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM--HDKEQFSE 189 N +E E V M ++ Q + + ++KM + E + E Sbjct: 166 FNNKENVTAFEYEVAVRMTAIWLQIVRNVSDTMQKMPACYLQRQERMKKMMQYIVEHYHE 225 Query: 190 -SALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEA 248 L+ + ++ S E R + +TPM ++ R+ + L T+ +TDIAF Sbjct: 226 AITLKEIAESASISIEECRRCFKDIIKETPMHYLSSYRVMVGMELLRTTDLDITDIAFRV 285 Query: 249 GYSSPSLFIKTFKKLTSFTPKSYRKKL 275 G++ S FI+ FKK TPK YR + Sbjct: 286 GFNDSSYFIQAFKKKNGMTPKQYRNHI 312 >UniRef50_C6J8U5 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8U5_9FIRM Length = 279 Score = 167 bits (424), Expect = 3e-40, Method: Composition-based stats. Identities = 65/276 (23%), Positives = 112/276 (40%), Gaps = 24/276 (8%) Query: 8 APEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLE 67 +PE TA+ L N + + + S H H + E V G+ I + + Sbjct: 9 SPEHPTAQNITLLNTSSSRY----EGDWPSIPHSHAFTELFYVRDGQGDFLIEDQIFPIS 64 Query: 68 RGDFVFIPLGSHHQSFYEFGAT-RILNVGISKRFFEQHYLPLLPYCFVASQVYRTNN--- 123 + D V I +H + VG+ L + F + YR N Sbjct: 65 KDDLVIINPHINHTEISKGSPPLSYFTVGVDG----------LCFSFNGHKEYRIFNCRE 114 Query: 124 ---AFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYRE---EQVIDDVPQWLKST 177 L Y ++ L+ + G E + +I +LR + E + P + Sbjct: 115 KKTDLLFYFNSLFQELDRQSEGYETICSHMLDILILQLRRITDSPFELITAQHPSKECAH 174 Query: 178 VEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMT 237 +++ D L+++ LS ++ YL+ +YYG +P+ +N RI K+ LE T Sbjct: 175 IKRYLDSNYGENITLDHLSELSHLNKYYLSHEFTKYYGISPINYLNRKRIEVCKELLENT 234 Query: 238 NYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 +Y ++DIA G+SS S ++F+K T +YRK Sbjct: 235 DYGISDIAHLTGFSSQSYLSQSFRKSCGMTAGTYRK 270 >UniRef50_C0EDY4 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDY4_9CLOT Length = 345 Score = 167 bits (423), Expect = 4e-40, Method: Composition-based stats. Identities = 46/272 (16%), Positives = 107/272 (39%), Gaps = 22/272 (8%) Query: 25 FHVFIYNKTESISG---LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQ 81 FH + K + + H HD++E + V G + I G+++ V + + H+ Sbjct: 65 FHGCPWRKEPARNPNPYPHNHDFFEMSYVYKGTFHNIIGGQQIDQPEDSLVLLSPQAKHR 124 Query: 82 SFYEFGATRILNVGISKRFFEQHYLPLLPYC-----FVASQVYRT-----------NNAF 125 F + N+ I + E+ ++ +L F +Y +NA Sbjct: 125 CFTRSSEDLVFNILIKRELIEKIFVQMLSESESVCRFFLDSLYNVRQKQPYLFFSCDNAL 184 Query: 126 LTYVETVISSLNLRETGLEEFVEMVTFYV---INRLRHYREEQVIDDVPQWLKSTVEKMH 182 + ++I ++ + ++ + ++RL E+ + + + + Sbjct: 185 TELIHSIIEEYFQQQDFYQSIIQAKLIELFSKLSRLHQKNAEETPAETSNFQLILQIEDY 244 Query: 183 DKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 + +S L ++ + YL+R Q+ + + ++ +IR+ A + L ++ + Sbjct: 245 IERHYSTVTLSSIAEHFNYTPSYLSRLIQKQFNQKFSCLVQDIRLKHACRYLAHSSLPID 304 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 + GY+ S F + FK+ + +P YRK Sbjct: 305 QVVEIVGYNDVSHFYRVFKQKHNVSPNQYRKS 336 >UniRef50_C7IIE8 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IIE8_9CLOT Length = 290 Score = 167 bits (423), Expect = 4e-40, Method: Composition-based stats. Identities = 51/283 (18%), Positives = 103/283 (36%), Gaps = 25/283 (8%) Query: 14 AREQQLFNGKNFHVFIYNK-----TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLER 68 +E+ + NF + I+ ++I LH H+ +E+ V GR +++ + + + Sbjct: 6 LKEKVMHGDDNFPIGIHKTDIDKGRDNILYLHWHEGFEYLTVTKGRAVFKVDDLEIEVSK 65 Query: 69 GDFVFIPLGSHHQSFYEFGA-TRILNVGISKRFFEQHYLPLLPYCFVASQVYR------- 120 G+ +FI H + V F + + F+ + Sbjct: 66 GEGIFINSNVLHSAHSINEEECSFFAVVCHPAFLSSYINDCINQRFINPILNHSLYFPIH 125 Query: 121 ------TNNAFLTYVETVISSLNLRETGLEEFVEMVTFYV-----INRLRHYREEQVIDD 169 L + V +E G E ++ + + N + + Sbjct: 126 LKKDVDWQRNILLLLTQVYDINKEKEFGYELLLKSKIYEIWFECIKNAKKSINKGSNTSY 185 Query: 170 VPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINF 229 + +K + +H+ F++ + +L S E+ R + T + +N RI Sbjct: 186 KTERMKVVLNYIHEN-YFNKIVVSEFASLVHMSDEHFCRFFKAMTHFTLVSYVNRYRIER 244 Query: 230 AKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 + L TN +++IA + G+ S F K F+K+ TP YR Sbjct: 245 SCVFLSQTNKKISEIAGDVGFGDISYFNKVFRKIMGCTPVDYR 287 >UniRef50_Q5WIZ4 Putative uncharacterized protein n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WIZ4_BACSK Length = 283 Score = 167 bits (423), Expect = 4e-40, Method: Composition-based stats. Identities = 62/265 (23%), Positives = 106/265 (40%), Gaps = 20/265 (7%) Query: 29 IYNKTESIS---GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYE 85 ++NKT+S H H+++E +V G I+ L GD V +P S H S + Sbjct: 19 VHNKTKSCDDELPHHLHEWHEIIMVHQGTCTFFIDDCFFELASGDIVIVPGNSIHCSLLD 78 Query: 86 FGAT-RILNVGISKRFFEQ---HYLPLLPYCFVASQ--------VYRTNNAFLT-YVETV 132 G T + L F ++ + R AFL + + Sbjct: 79 KGKTVTTSALYFCPSLLASMIGSESDSLHSLFTTAKTTKQYRYYMEREKQAFLAGLFDEI 138 Query: 133 ISSLNLRETGLEEFVEMVTFYVINRLRHYR---EEQVIDDVPQWLKSTVEKMHDKEQFSE 189 + + E V ++ Y I + +E++ VP W+K ++ + D E Sbjct: 139 AKETAIADLYSGETVALLIRYAIVFVSRNCGTAQEKLSPLVPAWIKESLAYI-DAHLHEE 197 Query: 190 SALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAG 249 L+ + A + Y ++ + G T ++ + R+ AK L+ T+ S+ IA G Sbjct: 198 LDLKMLAAHACVHPSYFSKKFKASIGLTYIEFLKSKRLVKAKDLLKTTDLSIQAIAEACG 257 Query: 250 YSSPSLFIKTFKKLTSFTPKSYRKK 274 Y S F +TF+ T TP +YRK Sbjct: 258 YHSMPHFYRTFRAATGTTPAAYRKN 282 >UniRef50_B2TM72 AraC-family transcriptional regulator n=3 Tax=Clostridium botulinum RepID=B2TM72_CLOBB Length = 291 Score = 167 bits (423), Expect = 4e-40, Method: Composition-based stats. Identities = 61/285 (21%), Positives = 123/285 (43%), Gaps = 24/285 (8%) Query: 15 REQQLFNGKNFHVFIYNKT----ESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 +E++ + IYN + E H H+ E LVL+G + +IN + GD Sbjct: 7 KEKREHGNFLLPLGIYNVSLGNIEKSIIAHWHNEIELILVLSGEFNLKINTDSYTCKDGD 66 Query: 71 FVFIPLGSHHQSFYEFGATRILN-VGISKRFFEQHYL---------PLLPYCFVASQVYR 120 + I GS H + + N + + + L P++ F + Sbjct: 67 IILINSGSLHYFSTKENESSTWNSIVFNMDQLNSNILDNCSVNFITPIINNEFKLPVIIH 126 Query: 121 ----TNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKS 176 NN + +I + N + G E ++ + F + L + + + + Sbjct: 127 KDSLINNELKCIILNIIDTYNSKYYGFELEIKSLIFKYFSLLFKFNLVKKKTNNTCLNEE 186 Query: 177 TVEKM-----HDKEQFS-ESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFA 230 +EK+ + +E ++ E + + A+ +Q + R +++ GKT +Q I R+ A Sbjct: 187 KIEKIKIVLEYIQENYNKEIDINRLSAICHYNQSHFMRFFKKHTGKTCIQFIKNYRLEKA 246 Query: 231 KKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 + T+ S+T+I+ E G+++ S FI++FK+ + TPK ++ +L Sbjct: 247 ASLISNTDLSITEISLEVGFTNISYFIRSFKEKYNTTPKGFKTRL 291 >UniRef50_B5JHR7 Transcriptional regulator, AraC family protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JHR7_9BACT Length = 316 Score = 167 bits (422), Expect = 5e-40, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 102/259 (39%), Gaps = 21/259 (8%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKR 99 H HD+ E L+ G + G + GD VF+ G +Y+ ++N+ Sbjct: 55 HTHDFCELALITRGSAMHWLEGAEFPITAGD-VFVLQGQQSHYYYDLQKLEMINIMFDPE 113 Query: 100 FFEQ-----HYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRE-------------- 140 +P F+ ++R + F +++ S+L E Sbjct: 114 QLNLPETRLRKIPGYRALFLLEPLFRKQHRFTSHLHLSRSTLAHSERIAVELDNEVRGKM 173 Query: 141 TGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLK-STVEKMHDKEQFSESALENMVALS 199 G E + ++ L +E + L+ + V + E +E+ A++ Sbjct: 174 EGYEAAMFAKFVELVVYLSRLYQETESTNAEALLRVAKVIGSIEDEFTKPWKVEDFAAMA 233 Query: 200 AKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKT 259 S+ R + G+TP+ + ++RI + L T S+++IAFE G++ + + + Sbjct: 234 HMSRANFMRVFRTATGETPINYLLQLRIQKSMTLLTSTKLSISEIAFEVGFNDSNYYTRQ 293 Query: 260 FKKLTSFTPKSYRKKLTEF 278 FK +P +YR+ T F Sbjct: 294 FKASQGISPLAYRRTHTGF 312 >UniRef50_C6D359 Transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6D359_PAESJ Length = 309 Score = 167 bits (422), Expect = 5e-40, Method: Composition-based stats. Identities = 54/296 (18%), Positives = 111/296 (37%), Gaps = 26/296 (8%) Query: 7 NAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLL 66 N Q+F + E I LH H+++E ++ G I+ + Sbjct: 10 NTRIDEKMHPVQIFQNRAL---QKKPGELILYLHWHEHFEIIVMQQGSAVFHIDSESYEA 66 Query: 67 ERGDFVFIPLGSHHQSFY-EFGATRILNVGISKRFFEQHYLPLLPYCFVASQVY------ 119 GD +F+P G+ H + G L + + F+ L +V + Sbjct: 67 HPGDVLFVPAGALHVGYSLCEGDLSYLAIVYNSSLFQNWMQDSLHTKYVLPYLEGRVQLP 126 Query: 120 ----RTNNA---FLTYVETVISSLNLRETGLEEFVEMVTFYVINRLR-----HYREEQVI 167 R + + + +E S ++ + V+ ++ L H EQ Sbjct: 127 VKPTRLDPSCADYYYLLEQANSEFKAKQPAYQLMVKSQLHMLLTLLSRKFLPHQLPEQAT 186 Query: 168 DDV---PQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINE 224 + + K+ +E + + + + + + + + ++ G+T + +N Sbjct: 187 NQYVHNREQFKALIEYI-EANFADKQTVADAARRMNLNVHHFCKMFKKLTGRTFIDYVNV 245 Query: 225 IRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 R+N A++ L + S+T+IA G + + F K +KK P RK+LT+ N+ Sbjct: 246 CRVNEAERLLLAGDLSITEIAGCVGCDNSNYFTKMYKKYKGVAPSQLRKQLTDTNK 301 >UniRef50_UPI0001BC4191 helix-turn-helix domain-containing protein n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=UPI0001BC4191 Length = 306 Score = 166 bits (421), Expect = 7e-40, Method: Composition-based stats. Identities = 58/279 (20%), Positives = 105/279 (37%), Gaps = 22/279 (7%) Query: 16 EQQLFNGKNFHVFIY-----NKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 E + F +Y T H H E + G + EI K+ L++G+ Sbjct: 14 ELAVHGNYEFPCAVYFSDVSKYTAGEIAWHWHKEIEIITIYKGTLYIEIENKKFTLKKGE 73 Query: 71 FVFIPLGSHH-QSFYEFGATRILNVGISKRFF--------EQHYLPLLPYCFVASQVYRT 121 +FI H RI++ K +Q Y+ L C S + T Sbjct: 74 SLFINSEEMHFMRMDAREECRIISFVFDKVLICGEKGSKIDQKYIIPLINCKELSALELT 133 Query: 122 NNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQV------IDDVPQWLK 175 ++ S G E + V ++ + +E + + + +K Sbjct: 134 EEDSQKLIQGYFS-YADEILGYEIVIRNVLSEILLNIVRENQELLEKSNGSNNTDRERMK 192 Query: 176 STVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLE 235 + +H K + +L ++ + + R R G +P++ + + RI A + L Sbjct: 193 YMLTFIH-KNYSEDISLGDIAKEAFIGEREALRCFARTIGTSPIEYLQKYRIYTAAELLR 251 Query: 236 MTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 + VT+I +AG++SPS F K F ++ TP+ YRK Sbjct: 252 KSELPVTEICLQAGFNSPSYFSKVFCRMLGMTPREYRKN 290 >UniRef50_C4Z7U7 LacI family transcriptional regulator n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z7U7_EUBE2 Length = 304 Score = 166 bits (420), Expect = 8e-40, Method: Composition-based stats. Identities = 63/256 (24%), Positives = 108/256 (42%), Gaps = 17/256 (6%) Query: 35 SISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILN- 93 +++ H H+ YE ++ G + K GD + H + + N Sbjct: 27 NMNVKHFHNQYEIFYIIEGERQFFFDNKSYNAYAGDIAILDTNLVHTTCSISDEDKGYNR 86 Query: 94 --VGISKR---FFEQHY--LPLLPYCFVASQVYRTNN----AFLTYVETVISSLNLRETG 142 + I F++ Y L L+ Y +Y N AFL + L + +G Sbjct: 87 VILYIDYEKMCDFDKKYPGLNLVNYFHNNYGIYHLNEDQRIAFLNLYRDLRHELTKKNSG 146 Query: 143 LEEFVEMVTFYVINRLRHYREEQ-----VIDDVPQWLKSTVEKMHDKEQFSESALENMVA 197 + VE+ T Y + +L + + VI+ + S + + E AL+ + Sbjct: 147 YQSRVEIATIYWLYKLLSLKHDSTQIHAVINSPKELSASNISAYLEANYTKELALDTISD 206 Query: 198 LSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFI 257 S+ Y+ R + Y G T + +N +RI A + LE +N S++D+A E G+ S S F Sbjct: 207 ELFMSKYYMCRIFKEYTGFTITEYVNTLRIKKATQILESSNLSISDVAAELGFESASYFE 266 Query: 258 KTFKKLTSFTPKSYRK 273 + FKK+ + TP YRK Sbjct: 267 RIFKKIMTVTPLKYRK 282 >UniRef50_Q28QP5 Transcriptional regulator, AraC family n=1 Tax=Jannaschia sp. CCS1 RepID=Q28QP5_JANSC Length = 284 Score = 166 bits (420), Expect = 8e-40, Method: Composition-based stats. Identities = 68/264 (25%), Positives = 107/264 (40%), Gaps = 9/264 (3%) Query: 19 LFNGKNFHVFIYNKTESISGL-HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLG 77 L G+ FH +E+ L H HDYYE L+ G+ + ING +LE G VF+ Sbjct: 14 LSPGEAFHFVRKELSEASPVLEHDHDYYELFLIQQGQVYHWINGLEEMLEPGHMVFVRPS 73 Query: 78 SHHQSFYEFG-ATRILNVGISKR---FFEQHYLPLLPYCFVASQVYRTNNAFLTYV--ET 131 H G +ILNV + Y + F L E Sbjct: 74 DRHALQGAPGTGAKILNVMFRTQTAAHLVTRYADVFGGRFFWQPGPLPVTLRLHGPQRER 133 Query: 132 VISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVID-DVPQWLKSTVEKMHDKEQFSES 190 I+S+ +T + F + +++D P WL + F + Sbjct: 134 AINSMLTLDTSFRNLARIELFLLSVMTHVLDTGEIVDGRAPGWLLQACHAAREPRVFRQG 193 Query: 191 ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGY 250 A + + + +SQ ++ R +RY G +P Q +N IRI A L T + DIA + G+ Sbjct: 194 A-DGFLHAAGRSQAHVCRQARRYLGLSPTQYVNRIRIQHAAMLLAGTERGLPDIAADCGF 252 Query: 251 SSPSLFIKTFKKLTSFTPKSYRKK 274 + S F + F++ TP+ YR + Sbjct: 253 ENLSYFHRLFREQYGTTPRGYRHR 276 >UniRef50_C6J7Z0 Helix-turn-helix domain-containing protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J7Z0_9FIRM Length = 302 Score = 166 bits (420), Expect = 8e-40, Method: Composition-based stats. Identities = 49/254 (19%), Positives = 105/254 (41%), Gaps = 17/254 (6%) Query: 36 ISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSF-YEFGATRILNV 94 + H HD E+ ++TG+ +NGKR++L GD + + H + +E L + Sbjct: 39 CAPCHWHDDIEWIYIITGKMRYYVNGKRLILNEGDSLMVNARQMHYGYAFEQQDCYFLCI 98 Query: 95 GISKRFF-------EQHYLPLLPYCFVASQVYRTNNA----FLTYVETVISSLNLRETGL 143 F E+++LP + + +N+ Y++ V+ ++G Sbjct: 99 LFHPSLFGNNQILQEKYFLPFFENTSLEFHHFYSNDEAGVKVGRYLQEVLLLKEDSDSGY 158 Query: 144 EE-----FVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVAL 198 E +E+ +F + L + + + ++ + + + +L ++ A Sbjct: 159 ELGVISCMLELWSFLIRTDLLSAAKNKSESEQELNIQKDMVSFIYQHYPEKISLTDIAAA 218 Query: 199 SAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIK 258 + + + Y ++P+ +N R+ + + L T S+T+IA G++ S F K Sbjct: 219 GHVGRSKCCQIFKHYMQQSPVDFLNTYRLKISCRLLCTTQKSITEIAILCGFNHLSYFSK 278 Query: 259 TFKKLTSFTPKSYR 272 F + TP+ YR Sbjct: 279 YFMECYGCTPREYR 292 >UniRef50_C6J044 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J044_9BACL Length = 294 Score = 166 bits (420), Expect = 8e-40, Method: Composition-based stats. Identities = 56/259 (21%), Positives = 104/259 (40%), Gaps = 13/259 (5%) Query: 28 FIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG 87 F +S H HD+YEF ++ G +NG+ LL+ G VFI H+ Sbjct: 19 FRVEALSQVSPEHTHDFYEFFVIEAGSCRHVVNGETQLLQAGCLVFIRPEDIHRYEQNGE 78 Query: 88 ATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTN------------NAFLTYVETVISS 135 + + L +A ++ +++ F+ E + Sbjct: 79 EDCRFYNVPCRHSLMDEAMAFLGEEEIAERLLQSHLPQVALLSPTEVGEFVALFERIKLL 138 Query: 136 LNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENM 195 ++ + ++ ++ R +++P WL+ + KM KE L + Sbjct: 139 SSIDKQKARLVLKSGLIDLLTRYFFNPNPVKQEEIPLWLEHALSKMQLKENLHR-GLPAL 197 Query: 196 VALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSL 255 LS +S ++ RA +RY +TP + +N+++++ A+ L T V +IA E G+ + S Sbjct: 198 YELSGRSIGHVNRAFRRYLQQTPTEYLNQLKLSAARNLLLTTELRVVEIALECGFENVSH 257 Query: 256 FIKTFKKLTSFTPKSYRKK 274 F FKK P R+ Sbjct: 258 FYHQFKKWYHQAPLDLRRN 276 >UniRef50_C0CUZ1 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CUZ1_9CLOT Length = 312 Score = 166 bits (420), Expect = 9e-40, Method: Composition-based stats. Identities = 68/252 (26%), Positives = 114/252 (45%), Gaps = 11/252 (4%) Query: 32 KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRI 91 + +H H YYE +V G IN L G F+ H +I Sbjct: 26 DRRQLVKIHCHSYYEIFIVAQGYGTHLINSTSEPLSPGALYFVRPDDVHCYMDVTSNFKI 85 Query: 92 LNVGISKRFFEQ--HYLP-------LLPYCFVASQVY-RTNNAFLTYVETVISSLNLRET 141 +N+ + + F++ YL L P C QV + + LT +E ++ + + + Sbjct: 86 INMIVPEDTFDRLTQYLGGTFRDDLLSPPCPPHVQVSMKEFKSILTELEQLVLTKKILKE 145 Query: 142 GLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAK 201 + F + F ++ + ++ P+WL+ +M KE F E L + LS K Sbjct: 146 KSDVFFRITVFGLLTKYFVLSPQKSSGRTPEWLRWLSLEMLKKENFVE-GLPALYRLSGK 204 Query: 202 SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFK 261 S E+L+RA ++Y K+P Q+IN+IR+ + QL+ T+ V I +AG+ S S F FK Sbjct: 205 SIEHLSRACRKYLQKSPTQLINDIRLEYVVNQLQNTDEKVIAICEDAGFDSLSHFYHIFK 264 Query: 262 KLTSFTPKSYRK 273 + +P +RK Sbjct: 265 QAYGMSPAQFRK 276 >UniRef50_A4EK09 Transcriptional regulator, AraC family protein n=1 Tax=Roseobacter sp. CCS2 RepID=A4EK09_9RHOB Length = 288 Score = 166 bits (420), Expect = 9e-40, Method: Composition-based stats. Identities = 56/256 (21%), Positives = 102/256 (39%), Gaps = 9/256 (3%) Query: 25 FHVFIYN-KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSF 83 FH + + H HD++E L+ +G+ +NG+ LE G FI H Sbjct: 18 FHFARKSLAKRFPNAAHDHDFFEVFLIESGQTSHWVNGETQQLEPGHLTFIRPNDVHAFS 77 Query: 84 YE-FGATRILNVGI---SKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVE--TVISSLN 137 + +I+NV + + Y + F S+ L V I+ Sbjct: 78 ADRTKGCQIINVMFRVETAKHLTNRYAKTIESAFFDSRAALPEMHMLDPVRFARAINVAQ 137 Query: 138 LRETGLEEFVEMVTFYVINRLR-HYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMV 196 +T + F ++ R + + P+W + FS+ A + Sbjct: 138 QLQTAHRSLARIEEFLLVLTNRVADAAGGIAQNAPRWFAEACSAAQSQTVFSKGA-AGFI 196 Query: 197 ALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLF 256 A + +S E++ R + G TP + IN++RI +A L S+ D+ + G+ + S F Sbjct: 197 AAAGRSHEHVCRTCKAVTGLTPSEYINQVRIEYAAHLLRSDERSIDDVVNDCGFDNSSYF 256 Query: 257 IKTFKKLTSFTPKSYR 272 + F++ TP++YR Sbjct: 257 YRLFRRQYGTTPRAYR 272 >UniRef50_A6LYY5 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LYY5_CLOB8 Length = 297 Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 52/252 (20%), Positives = 93/252 (36%), Gaps = 17/252 (6%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG-ATRILNVGISK 98 H H +EF L+L G+ +NGK L+ G +FI H + G + + Sbjct: 41 HWHTDWEFILLLNGKMSYSVNGKSYELQEGQAIFINSEQMHYGYSADGSDCNFICILFPP 100 Query: 99 RFF-------EQHYLPL----LPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFV 147 E + LP+ F+ + ++ V N + G E V Sbjct: 101 SLISSITRIKETYILPVCEDTSNPFFILHPEITWQRNLIELLKNVYELCNEEKDGFELHV 160 Query: 148 EMVTFYVINRLRHYRE-----EQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKS 202 + + L + + ++ DD + K L + A Sbjct: 161 MSLFNTICFSLYNNIKDSISIQETADDKKLEAMHNMTGYIQKNYQKRITLNEIAAAGNVC 220 Query: 203 QEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKK 262 + + KTP+ + E R+ + + L++++ SVT+IA + G++ S F + F K Sbjct: 221 RSSCCDIFKLILNKTPVSYLTEYRLEKSIELLKISSLSVTEIALQCGFTGSSYFTEIFHK 280 Query: 263 LTSFTPKSYRKK 274 TP YR+K Sbjct: 281 TLGCTPSQYRRK 292 >UniRef50_C0EIY9 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIY9_9CLOT Length = 327 Score = 165 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 57/283 (20%), Positives = 115/283 (40%), Gaps = 20/283 (7%) Query: 15 REQQLFNGKN-FHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVF 73 + + F G N F V ++ K H H+++E V G ++G++++L+ GD +F Sbjct: 41 KAEMFFRGDNRFSVILHPKLAIAQRYHTHEFFEIIYVYAGSCTTTVDGEQMVLKAGDLLF 100 Query: 74 IPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTN----------- 122 + + + H + + N+ I F EQ LL V Y + Sbjct: 101 LNIQTGHVISVDSWDDIVFNILIKPDFLEQSLFHLLSENDVFLNFYLESLYNRTMSEKYL 160 Query: 123 ------NAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKS 176 + + + ++ ++ + +E +++ L Q K+ Sbjct: 161 LFQENTDEIASTADRIVIEYLRQDPFAMKVIEAQFVTLVSLLARENRRQAPTGETIPGKA 220 Query: 177 TVEKMHD--KEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQL 234 V ++ ++ + L++ + YL+ + Y GK ++II + +I A++ L Sbjct: 221 FVPEILQWLSNHYAGATLKSTAEHFHYTTSYLSFLIKEYTGKNFLRIIQDFKIREAERYL 280 Query: 235 EMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 + T+ SV I+ + GY + F + FK T TP YR+ E Sbjct: 281 KETSLSVERISDQLGYKDAAYFCRVFKNTTGATPSEYRRSQQE 323 >UniRef50_C8NIW5 AraC family transcriptional regulator n=2 Tax=Granulicatella RepID=C8NIW5_9LACT Length = 282 Score = 165 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 55/255 (21%), Positives = 107/255 (41%), Gaps = 7/255 (2%) Query: 32 KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGAT-R 90 ++ S LH H + E V+ G+ I +R ++ DFV I H + Sbjct: 29 DSDWHSTLHTHPFTELFYVIDGKGEFIIQHQRFPVKANDFVIINPQVEHTEVSSPDSPLE 88 Query: 91 ILNVGISKRFFEQHYLPLLP--YCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVE 148 + VGI F + P+ + F + L Y+ ++ + + Sbjct: 89 YIVVGIQGLSF-SNLTPVDQGGHPFSFFNLRDEQKDILRYLNAMVQEATNQALSYDLVCH 147 Query: 149 ---MVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEY 205 + I R +H+ E + ++ LE + +++ S+ Y Sbjct: 148 NLLEILLIKILRHQHFDLEVGSHSKTTKDIAFIKHYLKTYYRESIQLEALASMTHLSRFY 207 Query: 206 LTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTS 265 ++ + ++ G +PM+ + IRI +K L TNYS++ +A G+++P+ F K F+K+T Sbjct: 208 ISHSFKKEVGMSPMEYLMTIRIKESKILLRTTNYSISQVADIVGFTTPTYFSKQFRKITG 267 Query: 266 FTPKSYRKKLTEFNQ 280 +P YR+K + +Q Sbjct: 268 ISPTDYREKYQKESQ 282 >UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5Z9N2_9FIRM Length = 293 Score = 165 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 54/280 (19%), Positives = 104/280 (37%), Gaps = 21/280 (7%) Query: 15 REQQLFNGKNFHVFIYNKTESIS----GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 E + +F Y + + LH H+ E ++ G+ +N + GD Sbjct: 10 HENKKHTPNDFPYNTYLCSIPLDFKSVNLHWHNEVELIVIKKGQGLVNVNLVTYTVNAGD 69 Query: 71 FVFIPLGSHHQSFYEFGAT-RILNVGISKRFF---------EQHYLPLLPYCFVASQVYR 120 VF+ G H + + N+ ++ PLL V Sbjct: 70 VVFVFPGQLHSISQKDYSIMEYENILFKSSLLKSSGYDLCNDKFIQPLLSGNLNIYPVIN 129 Query: 121 TNNAFLTYVETVISSLNL----RETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKS 176 +N F + ++I+ ++ R + V+ F + L I + + Sbjct: 130 SNFDFHDSLYSLINEIDKLCDKRPYAYQLAVKSYLFQIFYLLISNCGLNQIKPISKKALE 189 Query: 177 TVEKM--HDKEQFSE-SALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQ 233 ++ + + E F + ++E + S+ Y + + G + +Q +N+ R+ A K Sbjct: 190 KIKTILSYVAEHFQDNISIEEIAGHCFYSKSYFMKFFKETMGMSFVQYLNDYRLEVAAKL 249 Query: 234 LEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 L T+ + +IA G+ + S F + FKK TP YRK Sbjct: 250 LTTTSDDIINIAINTGFDNLSYFNRCFKKKYGITPGKYRK 289 >UniRef50_C7IFZ3 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IFZ3_9CLOT Length = 296 Score = 165 bits (418), Expect = 1e-39, Method: Composition-based stats. Identities = 60/277 (21%), Positives = 112/277 (40%), Gaps = 27/277 (9%) Query: 24 NFHVFI---YNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH 80 +F FI ++ H HD++E +VL G +N + +++GD + H Sbjct: 14 SFPFFIQYGFHDDAMPEHFH-HDFFELVIVLNGTATHIVNSEEFFIKKGDVFVFNMDLSH 72 Query: 81 QSFYEFGATRILNVGISKRFFEQHYLPLLPY-----CFVASQVYRTNNAFLTYVETVISS 135 + + +I+N+ ++ + FV +R +F + ISS Sbjct: 73 -GYKDPHNFKIINIMYKPERLDEICNDIKKSPGYQALFVLEPFFRKKYSFSNTLSLSISS 131 Query: 136 LNL--------------RETGLEEFVEMVTFYVINRL--RHYREEQVIDDVPQWLKSTVE 179 L ++ G + + ++ L ++ E +++ D L + Sbjct: 132 LEYVAELGARINEEYKRKDQGYQTMIYARFMEMVVYLSRQYIIENKLLHDTFVHLAKAIL 191 Query: 180 KMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNY 239 + D + LE + + S + R + YG TP I +R+N A L+ +N Sbjct: 192 FLEDN-YLNPIKLEKLADEAHMSVRHFNRIFKENYGTTPFNCILHLRVNHACSLLKNSNL 250 Query: 240 SVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 + DIA E+G+S + F + FKK+T TPK YR + Sbjct: 251 CIADIALESGFSDSNYFSRQFKKITGITPKEYRARYK 287 >UniRef50_C4ZFS6 Two-component response regulator n=4 Tax=Clostridiales RepID=C4ZFS6_EUBR3 Length = 293 Score = 165 bits (418), Expect = 1e-39, Method: Composition-based stats. Identities = 59/291 (20%), Positives = 106/291 (36%), Gaps = 22/291 (7%) Query: 7 NAPEIATAREQQLFNGKNFHVFIYNKTESISGL----HQHDYYEFTLVLTGRYFQEINGK 62 N P +E F V Y + H HD E TL+ G +I+ Sbjct: 4 NNPPALGQKENAKHGEVFFPVQKYITRLAADYPVITTHWHDEAELTLITKGSCTYQIDLL 63 Query: 63 RVLLERGDFVFIPLGSHHQSFYEFGA-----TRILNVGI----SKRFFEQHYL-PLLPYC 112 + GD +FIP H T + ++ + YL PL+ + Sbjct: 64 EYEAKEGDIIFIPPLLLHSISIRDCDEFYSETYVFHINFLGGNNTDICSSRYLTPLINHE 123 Query: 113 FVASQVYRTNNAFLTYVETVISSLNL----RETGLEEFVEMVTFYVINRLRHYREEQV-- 166 F + + + + + +E E ++ I L Y E+ Sbjct: 124 FAMPYLIAPKHPAYSSLCKCFMRITNLYSRQEFAYELALKAFLLQAIFLLLQYSEKNADF 183 Query: 167 -IDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEI 225 ++ LK+ ++ + D + + L S+ + R +++ T +Q IN + Sbjct: 184 GVNTSSDKLKNVLDYI-DVHYAESIQVAELAGLCYFSEYHFMRFFKKHMNMTCVQYINNV 242 Query: 226 RINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 R+ + +Q E N S+ D++ G+ + S F + FKK TP S+ K L Sbjct: 243 RLEKSVEQFERGNTSILDVSLSVGFHNLSYFHRAFKKRYHMTPLSFIKSLE 293 >UniRef50_A7VU88 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VU88_9CLOT Length = 308 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 64/286 (22%), Positives = 109/286 (38%), Gaps = 23/286 (8%) Query: 10 EIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 + E Q+ + + ++ H HD +E + G + +G V L G Sbjct: 14 KETITYESQMLHYGLYTAGYQRVFQADIPWHWHDEFELGYISGGSVVYQTSGLTVTLHEG 73 Query: 70 DFVFIPLGSHHQSFYEFG--ATRILNVGISKRFFEQHYLPLLPYCFVAS----------Q 117 D +FI G H R+ K F LL +VA Sbjct: 74 DGIFINSGVLHYLHPLEPCREARLQTQFFDKSFLAGSLGSLLDIKYVAPVLDQRQLEAVP 133 Query: 118 VYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHY------REEQVIDDVP 171 +YR++ ++E + + L EEF E+ + + L ++E + Sbjct: 134 LYRSDPESKGFLECLQKGVELCSRK-EEFFELRLRNLFSELWESIYRWAAQKESSTPSLR 192 Query: 172 QWLKSTVEKM---HDKEQFSE-SALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRI 227 + ++ K + + FSE ++ ++ A S+ R Q G TP++ + +R+ Sbjct: 193 RSIEDDRIKQMMRYVQAHFSEKISVSSIAASIPISERECYRLFQNSMGITPIEYLISVRL 252 Query: 228 NFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 A+ L TN S+ DIA E G+ S S F K F+ TP YR Sbjct: 253 QNAQSLLMNTNKSILDIALETGFGSSSYFGKIFRSHHRLTPAQYRN 298 >UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR n=2 Tax=Clostridiales RepID=C4Z204_EUBE2 Length = 277 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 58/269 (21%), Positives = 106/269 (39%), Gaps = 16/269 (5%) Query: 22 GKNFHVFIYNKTESI----SGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLG 77 K+F + ++ + G H H + E + +G I+ +GD V +P G Sbjct: 6 SKDFDIKRIKRSNTSCSTGVGAHVHPFNEIFYLSSGECTSFIDHNIYKFGKGDLVIVPSG 65 Query: 78 SHHQSFYEF-GATRILNVGISKRFFE----QHYLPLLPYCF---VASQVYRTNNAFLTYV 129 H++ Y G + + E Q L+ C V + + + + + Sbjct: 66 CLHRTTYNGKGMHERIVISFRNEATEWIQNQTGKELMENCMKPGVVNIPEKRRDYVVALL 125 Query: 130 ETVISSLNLRETGLEEFVE---MVTFYVINRLRHYREEQVID-DVPQWLKSTVEKMHDKE 185 + +I + + F++ + I R ++Y E + + DV + V + Sbjct: 126 DKLIFENDSPDELSPAFIKVGLIELLLFIIRCKNYEENVIKEIDVDNRIIQEVATYIYEH 185 Query: 186 QFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIA 245 +LE + S+ YL++ + G + I +RI A L TN S+TDIA Sbjct: 186 YADNLSLEYVADKFNLSRSYLSKKFKTATGFGFKEYIINVRIQNACNLLLETNKSITDIA 245 Query: 246 FEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 FE G++ + F F+K +P YRK Sbjct: 246 FECGFNDSNYFGDAFRKAKGISPHKYRKN 274 >UniRef50_C6JFK6 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFK6_9FIRM Length = 283 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 54/282 (19%), Positives = 109/282 (38%), Gaps = 20/282 (7%) Query: 15 REQQLFNGKNFHVFIYNKTESISGL---HQHDYYEFTLVLTGRYFQEINGKRVLLERGDF 71 +E+ + Y I H HD E + +G +N + + ++ GD Sbjct: 2 KERSSHGSFELPIETYTDNCEIFHSLYNHWHDEMELIYIESGSGLVRLNKEILRVKAGDL 61 Query: 72 VFIPLGSHHQSFYEFGATRIL-NVGISKRFF--------EQHYLPLL-----PYCFVASQ 117 + + G H + ++ F ++ + LL + + S+ Sbjct: 62 IIVNRGVLHGIKTDLKNILYFRSIVFDLNFLSGPAGDLCQERVISLLMDNQAEFTHIISR 121 Query: 118 VYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKST 177 + + S ++ ++ + F + D ++ Sbjct: 122 SDDNYGNICLLFDRIHSCHKEKKPYYFVKLKALFFSFFYEMLMGNYITPADKDENKSLAS 181 Query: 178 VEKMHDKEQFS---ESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQL 234 ++K+ D + + ALS S+ Y + ++Y GKT + IN++RI AK L Sbjct: 182 IKKILDYINLNYSQPLTAAELTALSNYSEYYFMKLFKQYTGKTLIAYINDLRIEKAKPML 241 Query: 235 EMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 ++ SVT+IA E G+++ S FIK F++ T +P +R+ L+ Sbjct: 242 LHSDSSVTEIALEVGFNNTSYFIKKFQQATGMSPHKFRRNLS 283 >UniRef50_C0X5H9 AraC family transcriptional regulator n=22 Tax=Enterococcus faecalis RepID=C0X5H9_ENTFA Length = 272 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 51/253 (20%), Positives = 102/253 (40%), Gaps = 11/253 (4%) Query: 30 YNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGA- 88 +N+ H H++ E +++L G + G++ G + H + G Sbjct: 20 WNEETHPYNCHHHEFLEISILLEGESEYIVQGQQYHATAGTVFLFNPRTEHGEQQKAGTY 79 Query: 89 TRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRE----TGLE 144 + L++GIS + E + P + + AFL ++ LN +E ++ Sbjct: 80 SHQLHIGISNLYLEGLARNVFPNKSALLDLSHLHGAFLEKAWQIVHELNHQEVESALQIK 139 Query: 145 EFVEMVTFYVINRLRHYREEQV------IDDVPQWLKSTVEKMHDKEQFSESALENMVAL 198 V + Y++ L +E ++ + + L + + E LE + + Sbjct: 140 ALVIELLVYILRSLAVDQENKIETRLSKTEKRKRNLVNHTIYYLETHHDEEITLEQLAEM 199 Query: 199 SAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIK 258 + YL++ + G P+ + +IR+N AK+ L+ + SV ++A GY F K Sbjct: 200 LYVTPTYLSKTFKAATGVGPINYLIQIRLNHAKELLKNDSLSVKEVAKTVGYEDAYHFSK 259 Query: 259 TFKKLTSFTPKSY 271 FKK +P + Sbjct: 260 LFKKYYGKSPSQF 272 >UniRef50_Q5WL40 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WL40_BACSK Length = 323 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 64/281 (22%), Positives = 110/281 (39%), Gaps = 24/281 (8%) Query: 16 EQQLFNGKNFHVFIYNKTESIS-GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFI 74 E F + I T I H+HDY E V G Q I + V L++G+ V + Sbjct: 38 EANKFLAPGTEIMIRKHTRFIDFPPHRHDYIEMNYVYNGSLKQTIGDRAVELQKGELVVL 97 Query: 75 PLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLP----YCFVASQVY----------- 119 H+ I+N I FF + L Y F+ ++ Sbjct: 98 NQHIEHEIEACGTEDIIINFIIQPSFFNYIFSFLNVEGPFYSFLIDSIHGSEPLGQFLYF 157 Query: 120 ------RTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQW 173 VE ++ + ++ +V M+ + + +Q + QW Sbjct: 158 KCAKEASVQQLLRKMVEEMMEPDAYSQASIKLYVGMLMIELAKKANTLDGKQKLSLHNQW 217 Query: 174 LKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQ 233 ++ T + EQ+ ++L + + L++ ++ GKT ++ E R++ AK+ Sbjct: 218 IRQTFAYI--DEQYKHASLYELAKRLNQPHYLLSKVIKKQTGKTFKALLQERRLDIAKEL 275 Query: 234 LEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 L ++ V+ IA E GY + S F + FKK TP YRKK Sbjct: 276 LVQSDLPVSVIAQEIGYDNFSYFYQIFKKHFHTTPLVYRKK 316 >UniRef50_C0FP55 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FP55_9FIRM Length = 279 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 51/266 (19%), Positives = 108/266 (40%), Gaps = 16/266 (6%) Query: 23 KNFHVFIYNKTE--SISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH 80 K++ + + + H H YYE +L+G IN L GDFV IP + H Sbjct: 11 KDYKIDFAERDADFHMDRFHYHPYYEIYFLLSGNCSALINHSIYHLVPGDFVLIPQSAMH 70 Query: 81 QSFYEFGAT-----RILNVGISKRFFEQHYLPLLPYCFVASQVYRTN-------NAFLTY 128 + Y+ +T + + F +L + F ++ T+ F T Sbjct: 71 RFVYDCNSTVKRYNLFFTMDFAASLFHSDTKDILEHLFHYPVLHLTSLLQGNATRLFDTL 130 Query: 129 VETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFS 188 + + + + + ++ ++ ++ R R + + Q +D ++++ + Q Sbjct: 131 YQETVGQDSCSQAVIPAYISLILSLLV-RNRDHIQLQDLDSAENAIQASARYISTHFQ-E 188 Query: 189 ESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEA 248 +L + S Y ++ ++ G + + + R+ A + L T+ +VT+IA Sbjct: 189 PVSLHMVADYVHMSPTYYSKKFKQITGVGFKEYLTKTRLYEATELLTHTSLNVTEIAIRC 248 Query: 249 GYSSPSLFIKTFKKLTSFTPKSYRKK 274 G++ + F F+K +P YRK+ Sbjct: 249 GFNDGNYFGDAFRKEFGLSPLQYRKR 274 >UniRef50_C0EDI9 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDI9_9CLOT Length = 369 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 56/259 (21%), Positives = 113/259 (43%), Gaps = 20/259 (7%) Query: 39 LHQHDYYEFTLVLTGRYFQEIN-GKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGIS 97 H HD++E V TG EI+ ++V L++ + + + H+ + I N+ +S Sbjct: 111 FHFHDFFELIYVHTGSLRNEIDYTEQVQLDKNHVLLLNPNARHRLLCDDPQAVIFNLMLS 170 Query: 98 KRFFEQHYLPL-----LPYCFVASQVY-----------RTNNAFLTYVETVISSLNLRET 141 + F E L L L + F + +Y N A ++ +I R+ Sbjct: 171 RSFVEHTLLSLFDEDNLIFYFFLNSIYGGDRIRSFLYLPLNPAVEQRIQCIIKEHCDRQP 230 Query: 142 GLEEFVEMVTFYVINRL-RHYREEQVIDDVPQWLKSTVEKM--HDKEQFSESALENMVAL 198 ++ + + R ++EE ++ S + + + + F+ + L + Sbjct: 231 LCQQMIAANLLMLFGEFARLHKEELDVESELLAQSSDIGDILRYLRLNFATATLASTARK 290 Query: 199 SAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIK 258 S+ Y +R +R GK ++++EIR+ A L+ ++ V I+ GY +P+ F + Sbjct: 291 FNYSESYFSRMIKRQTGKRFTELLSEIRLETACNYLKNSDLPVEKISEIIGYQNPANFFR 350 Query: 259 TFKKLTSFTPKSYRKKLTE 277 FKK + +PK +R++ E Sbjct: 351 LFKKHLATSPKDFRRQYRE 369 >UniRef50_C6L8V9 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L8V9_9FIRM Length = 300 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 55/291 (18%), Positives = 117/291 (40%), Gaps = 22/291 (7%) Query: 5 VINAPEIATAREQQLFNGKNFHVFI-----YNKTESISGLHQHDYYEFTLVLTGRYFQEI 59 +IN + A E ++ ++I N + + H H+ E V+ G I Sbjct: 1 MINTDIMQDASEIVHYDNPGVPLYIRTGILSNYPDMKALCHWHEDIELIYVIEGEMNYRI 60 Query: 60 NGKRVLLERGDFVFIPLGSHHQSFYEFG-ATRILNVGI-------SKRFFEQHYLPLLPY 111 N + +LL+ D + + H + R + + S + ++ + P + Sbjct: 61 NDRDILLKEKDCLVVNSRQLHYGYAHLRRECRFICILFHPGLLNASPKIYQYYVAPFIEN 120 Query: 112 CFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMV---TFYVINRLRHYREEQVID 168 +A Y ++A V+ +++ + L +T ++ E+ T Y++ R+ + + +++ Sbjct: 121 KNIAYFHYAADSANHEQVQALLNRILLLKTEEKDAYELEAISTLYLLWRILFLQHKSLLE 180 Query: 169 DVPQW------LKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQII 222 P + L+ + + L+ + A S+ +RY ++P+ Sbjct: 181 QEPAYDYSDLTLQKKMVSYIYEHYQDTLTLDAIAASGNISRSKCCIIFKRYLRQSPIDFA 240 Query: 223 NEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 N+ R+ ++ L T S+ IA G++ S F K F + TP YRK Sbjct: 241 NKYRLEVSRYLLANTRSSIAQIAVSCGFNHLSYFSKLFCREYGCTPTEYRK 291 >UniRef50_B0AA61 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AA61_9CLOT Length = 300 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 61/299 (20%), Positives = 104/299 (34%), Gaps = 26/299 (8%) Query: 1 MMQPVINAPEIATAREQQLFNGKNFHV--FIYNKTESISG---LHQHDYYEFTLVLTGRY 55 M Q +I ++ +LF F + + ++G H H+ E V +G Sbjct: 1 MEQQIIEIIVDENKQQLELFGTPMFPCKACYSDINKFVTGDISWHWHEEIEVIRVKSGSI 60 Query: 56 FQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILN-VGISKRFFEQHYLPLLPYCFV 114 ++ +L GD VFI H ILN + +K + FV Sbjct: 61 HLYLDNSDFVLNEGDGVFINSNILHYIRAGTSEECILNSLVFNKNLISGGVQSVFEQNFV 120 Query: 115 ASQVYRTN-------------NAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLR-- 159 V N ++ S E G E V ++ + Sbjct: 121 NPIVENKNLSGIAFYKNTSWGEEASACIKNAFSQFEKSEFGYEILVREYLSHIWYIMLKN 180 Query: 160 ----HYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYG 215 + + D + +K+ + +H + L ++ + S+ R + G Sbjct: 181 IQDLNLNKNNRNDLNSERIKNILSFVHKNYN-KQITLNDIAKVVNLSERECLRCFKNTLG 239 Query: 216 KTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 +P+Q I + R++ A K L +T I+ G+ SPS F K FK+ TP YR K Sbjct: 240 ISPIQYILKYRVSIATKMLRENKDPITIISDAVGFDSPSYFSKIFKRFIGITPTQYRNK 298 >UniRef50_B1QXT7 Transcriptional regulator, AraC family n=3 Tax=Clostridium RepID=B1QXT7_CLOBU Length = 289 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 58/277 (20%), Positives = 114/277 (41%), Gaps = 16/277 (5%) Query: 20 FNGKNFHVFIYNKTESISGLHQ----HDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIP 75 F+ NF + K++ + H H + E + G ++ V ++ D + I Sbjct: 13 FSDFNFELLYITKSKFENDWHSTAHIHPFMEIFFITEGNGSFQLEDSTVNVKEYDLIIIN 72 Query: 76 LGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVAS--------QVYRTNNAFLT 127 H + + + + F ++ L F S + + ++ L Sbjct: 73 PNCLHTEKSNLNTSPLEYIVLGIDNFSINFFNLNNEKFSQSDSKNYHVINLKKNSSIILN 132 Query: 128 YVETVISSLNLRETGLEEFVE-MVTFYVINRLRHYREEQVIDDVPQWLK---STVEKMHD 183 + +I + L+ E + M++ +++N LR ++ + + L + ++ D Sbjct: 133 QLNLIIDEIKLKNYKYEVACKSMLSLFILNILRTIPSMSILQNEKKNLNLECAKIKNYLD 192 Query: 184 KEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTD 243 LE + LS ++ L A + G +P+ + E RI AK LE TNYS+ D Sbjct: 193 SHYSENITLETLSNLSYMNKFSLVHAFTKQIGMSPISYLIEKRITEAKSLLETTNYSIKD 252 Query: 244 IAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 I G+S+ S F + FKK T+ +PK Y+ + + + Sbjct: 253 IGSIVGFSNSSYFSQMFKKQTNLSPKQYKVNMIKNPK 289 >UniRef50_C0E8H9 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E8H9_9CLOT Length = 358 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 52/258 (20%), Positives = 104/258 (40%), Gaps = 20/258 (7%) Query: 40 HQHDYYEFTLVLTGRYFQEI-NGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISK 98 H HD+YE V G++ E N R+ ++ + + + H + + + N+ + K Sbjct: 95 HYHDFYELAFVYRGKFINEFPNHDRIEIDESSLILLNPYAVHLPYTQTPDDIVFNILLRK 154 Query: 99 RFFEQHYLPLLP-----YCFVASQVY-----------RTNNAFLTYVETVISSLNLRETG 142 F E + ++ + F +Y + N + ++I L R+ Sbjct: 155 SFVENKLVNMISDNKIFFNFFLDSIYGNEHITNFLVFKNNQEVSNLILSLIMELCDRQLY 214 Query: 143 LEEFVE---MVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALS 199 E+ V + F ++ R+ + +D + + + + +S +L + Sbjct: 215 FEQVVNSYLVALFAILVRIHQQEFSEAMDGLAKNRTIADILSYIRYNYSHVSLAEVAEHF 274 Query: 200 AKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKT 259 S Y++R ++ + +I++ R+ A L+ +N S I GYS S F K Sbjct: 275 NYSIGYMSRLIKQETSMSFSEIVSNYRLEIACNYLKNSNISTEKITEIIGYSDTSYFYKA 334 Query: 260 FKKLTSFTPKSYRKKLTE 277 FKK F+P YRK+ + Sbjct: 335 FKKQQGFSPIDYRKRFQK 352 >UniRef50_A8SQN1 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8SQN1_9FIRM Length = 294 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 52/258 (20%), Positives = 104/258 (40%), Gaps = 19/258 (7%) Query: 35 SISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH-QSFYEFGATRILN 93 + LH H++ E + G+ ++ +E GD + I G H S +E + N Sbjct: 34 NSVSLHWHEFMEIIYIKKGKGNVTVDFTTHYVEEGDIIIILPGHIHGISQHEGYSMEYEN 93 Query: 94 VGISKRFFEQH---------YLPLLPYCFVASQVYRTNNAFLTYVETVISSLN----LRE 140 + S F +LPLL +Y ++ + + ++ ++ Sbjct: 94 ILFSVDMFRSKNHDSLDSEFFLPLLAGDVDIKSIYDKDDPLYPQLSSCLNRVDKLCSETP 153 Query: 141 TGLEEFVEMV---TFYVINRLRHYREEQVIDDVPQWLKST-VEKMHDKEQFSE-SALENM 195 G ++ FYV+ R+E + + L+ T + + E + E ++ ++ Sbjct: 154 KGYHLALKGCYFEFFYVLFTNSTVRDEADRKNRSRDLERTKLILSYIDENYKEAISITDI 213 Query: 196 VALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSL 255 + S+ + R + G + + +N+ R+N A + L + SV +A G+ + S Sbjct: 214 ASYCGFSESHFMRFFKNTMGVSFVSYLNDFRLNVAARLLSTNDDSVLSVAENCGFFNLSY 273 Query: 256 FIKTFKKLTSFTPKSYRK 273 F + FKK TP YR+ Sbjct: 274 FNRMFKKKYGVTPSRYRE 291 >UniRef50_C0C2H5 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2H5_9CLOT Length = 300 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 51/287 (17%), Positives = 96/287 (33%), Gaps = 28/287 (9%) Query: 16 EQQLFNGKNFHVFIYNKTESI-----SGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 E F ++ T S H H E +L G ++N L +GD Sbjct: 13 ELNPHGNYGFPFYLIYVTLSAYQFGRFNCHWHPELEIACILEGTMTYQVNQNLYQLGKGD 72 Query: 71 FVFIPLGSHHQ-SFYEFGATRILNVGISKRFF---------EQHYLPLLPYCFVASQVYR 120 +F+ + H +E + + + + PLL S V+R Sbjct: 73 CLFVNSNALHSGCMFENNDCKYIVATFNPSLIYGYEKSDIDTNYTFPLLNTDNFTSFVFR 132 Query: 121 T----NNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVID-------- 168 N F ++ + + E ++ + L + + Sbjct: 133 DGADGNETFQKIMKEMAAFYTEENACYELHIKSRLCELWALLFEEFQRSQLPSGAGLAEA 192 Query: 169 DVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRIN 228 LK+ + +H L+ M S+ R ++ +TP + + RI Sbjct: 193 KQISRLKNAIIFIHSS-YTDPITLDQMAESCHTSKSEFCRIFKKTLHQTPFEYLLRYRIQ 251 Query: 229 FAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 + L S+T+IA + G+S S + + F+K +P+ Y+K L Sbjct: 252 KSLPLLVTDTCSITEIASQVGFSGSSYYSEVFRKYMGCSPREYKKNL 298 >UniRef50_UPI0001789C32 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C32 Length = 297 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 49/285 (17%), Positives = 108/285 (37%), Gaps = 25/285 (8%) Query: 13 TAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFV 72 Q F FH+ + + LH HD E + G I + V E GD + Sbjct: 11 VPHRDQDFPFDVFHI--IPPGKEVLHLHWHDDLELIYFIRGNATFYIGSETVKPEPGDLM 68 Query: 73 FIPLGSHHQSFYEFG-ATRILNVGISKRFFEQH-----YLPLLPYCFVASQVYRT----- 121 F+ G H F + + E ++ + + + Sbjct: 69 FVNKGMIHTGFADDEHQVEYYALVFHSVLAESRVAGSSHVQITNPYASGKRFFPILLPVT 128 Query: 122 ---NNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYRE--------EQVIDDV 170 N+ V+ +I+ + G + ++ + ++ L + + V ++ Sbjct: 129 DAYNSLIAGIVKQMIAEYEQQAIGYQVAIQSMLHLLLVHLSRHHHLHGPTGSADTVGAEL 188 Query: 171 PQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFA 230 K + + ++ + ++ + S+ + R ++ GKT ++ +N +RIN A Sbjct: 189 TDRFKELIAFV-ERHYPEKLTVQQAAGIVNLSEYHFCRTFKKVTGKTFVEYVNLLRINAA 247 Query: 231 KKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 ++ L ++ +T+IAF+ G+ S + F + F++ +P RK+ Sbjct: 248 EQLLIHSSDPITEIAFKVGFGSVNYFSQMFRQYKRHSPSQCRKRY 292 >UniRef50_A5I5L7 AraC-family transcriptional regulator n=10 Tax=Clostridium RepID=A5I5L7_CLOBH Length = 688 Score = 164 bits (415), Expect = 3e-39, Method: Composition-based stats. Identities = 54/267 (20%), Positives = 109/267 (40%), Gaps = 12/267 (4%) Query: 22 GKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQ 81 + + + + S +H H+ E VL G I + + + + I H Sbjct: 9 TNDLPIKVSMQNIKKSPIHWHNAMEVIYVLEGSIKITIETESHRVNKQEIGIINPEEAHS 68 Query: 82 SFYEFGATRILNVGISKRFFEQHY-----LPLLPYCFVASQVYRTNNAFLTYVETVISSL 136 ++L I FF ++Y + +Q + + Y+ T++ + Sbjct: 69 IKSITNNNKVLIFQIDTSFFNKYYDIENMFFYTDFSAPEAQKHEKYDVLRKYLSTLLCEI 128 Query: 137 NLRETGLEEFVEMVT----FYVINRLRH--YREEQVIDDVPQWLK-STVEKMHDKEQFSE 189 + E+ VE + +++IN + Y EE++ ++ Q+ + + K ++ Sbjct: 129 AQKGDNYEDVVEEILVDLLYHLINNFHYLIYDEEELKENEVQFERYDRIIKYIYSNYNNK 188 Query: 190 SALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAG 249 +++++ L S YL+ + G + +N R+ A K L T+ ++++I+ E G Sbjct: 189 ISIQDIARLEFLSSHYLSNEMKNKVGYSFNDFVNLTRVEEAIKLLLDTDKTISEISEELG 248 Query: 250 YSSPSLFIKTFKKLTSFTPKSYRKKLT 276 +S F K FKK TP YRKK Sbjct: 249 FSHTRYFNKHFKKHYKCTPMQYRKKYK 275 >UniRef50_B6FJC5 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FJC5_9CLOT Length = 309 Score = 164 bits (415), Expect = 3e-39, Method: Composition-based stats. Identities = 60/293 (20%), Positives = 114/293 (38%), Gaps = 34/293 (11%) Query: 14 AREQQLFNGKNFHVFIY--------NKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVL 65 E + K F + +Y LH H+ +FT+V +G+ ++GK Sbjct: 15 LHEINYYTDKGFPIEMYTVTQGNIEPSGRGYMDLHWHEELQFTVVTSGKLKLRVDGKLYT 74 Query: 66 LERGDFVFIPLGSHHQSFYEFGATRILNVGISK---RFF------EQHYLPLLPYCFVAS 116 L+ G+ +FI H + R L+ FF E LP + +A Sbjct: 75 LDEGNGIFINRNLLHITTEISDGGRYLSFNFPDKVVSFFSGSTMEENFVLPYVGNYGIAV 134 Query: 117 QVYRTNNAFLTYVETVISSLNL---------RETGLEEFVEMVTFYVINRLRHYREEQVI 167 ++ ++ + + + L + G EE+ + I + E+ Sbjct: 135 VEFKRTTSWQKEILDTLLKMELLFKRRREKRQAVGREEYQIAIKIVEIWYMMICNIEKSG 194 Query: 168 DDV-------PQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQ 220 + + +++ + +H + L ++ S R + K+P + Sbjct: 195 KKISNSYIRKQERIQAMLSYIH-NQYMHPMCLADIAQAGNVSVGECCRGFKEVVCKSPNE 253 Query: 221 IINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 + E RI +K+ L T SVT+++ G++S S FI+ FKK+T TPK+Y+ Sbjct: 254 YLAEYRILRSKELLRGTELSVTEVSGAVGFNSVSHFIQCFKKMTGVTPKAYKN 306 >UniRef50_C0FW59 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0FW59_9FIRM Length = 292 Score = 164 bits (415), Expect = 3e-39, Method: Composition-based stats. Identities = 62/276 (22%), Positives = 106/276 (38%), Gaps = 22/276 (7%) Query: 17 QQLFNGKNFHVFIYNK-TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIP 75 +Q ++F ++ YN+ +H HDYYEF L G I G++ L+ GD V IP Sbjct: 12 RQYMLSRDFEIYYYNEPASEKVSIHSHDYYEFYFFLEGDVSIWIEGEQYPLKYGDMVLIP 71 Query: 76 LGSHHQSFYEFGAT--RILNVGISKR-------------FFEQHYLPLLPYCFVASQVYR 120 G H + R IS + Q+ L Y F + Sbjct: 72 PGIKHMAMVHGNEIPYRRFVFWISVEYCNQLMEVSSSYGYLMQNVLVKKKYIFHNDLI-- 129 Query: 121 TNNAFLTYVETVISSLNLRETGLEEFVEMVTFYV---INRLRHYREEQVIDDVPQWLKST 177 T N + +I + G E V + + +NR+ + ++ + Q L Sbjct: 130 TFNTIQYRIFQLIEEIKSERFGKEAKVSLCVNDLVLQLNRIVYEQQNPKSEKEEQNLYQN 189 Query: 178 VEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMT 237 + D E +LE + S+ ++ + G + Q I + R+ +K + Sbjct: 190 IIYYIDDHLDEELSLEQLAGQFFVSKYHIAHIFKEQMGLSVHQYILKKRMQASKAAIL-G 248 Query: 238 NYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 S+TD+ G+ S F + FKK +PK Y++ Sbjct: 249 ETSITDVYTMFGFKDYSSFYRAFKKEFGVSPKEYKE 284 >UniRef50_C5RYV2 AraC family transcriptional regulator n=1 Tax=Actinobacillus minor NM305 RepID=C5RYV2_9PAST Length = 300 Score = 164 bits (415), Expect = 3e-39, Method: Composition-based stats. Identities = 57/291 (19%), Positives = 110/291 (37%), Gaps = 22/291 (7%) Query: 5 VINAPEIATAREQQLFNGKNFHVFIYNKTES-----ISGLHQHDYYEFTLVLTGRYFQEI 59 +++ + +E F + +Y T S H HD Y+F+ V G + I Sbjct: 8 IVDVKIDRSNQELTNHGDFTFPLAVYKNTLSKNLLGYVIWHWHDEYQFSYVTQGEIYFYI 67 Query: 60 NGKRVLLERGDFVFIPLGSHHQSF-YEFGATRILNVGISKRFF--------EQHYLPLLP 110 N + +L+ G +FI G H + + + I K+ F EQ YL L Sbjct: 68 NDQTFILKEGQGIFINTGCMHSIKAVNDPESTYVCINIDKKLFSSFKGSVIEQKYLNTLT 127 Query: 111 YC-FVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVI-- 167 + + ++ + + E + + + + ++ Sbjct: 128 QSAIFLDLSEEWHIECINKLKDIYQFYVDKSFSFEIDICINLMQTLALVVKNALNPILLT 187 Query: 168 ----DDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIIN 223 D Q +K + +H + + LE + ++ R +R T + + Sbjct: 188 TIESKDEYQKIKKILSFLH-QHYAEKITLEQIAQHIFLNKNECCRLFKRKTKMTIFEYLL 246 Query: 224 EIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 E R+N + + L ++ S++ IA + G+S+ S +I TF K TP YRK+ Sbjct: 247 EHRLNKSIELLIHSDKSISQIAIDTGFSTVSYYIDTFHKNVGITPNEYRKR 297 >UniRef50_UPI0001BC2F1F 2-isopropylmalate synthase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC2F1F Length = 288 Score = 164 bits (415), Expect = 3e-39, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 112/278 (40%), Gaps = 19/278 (6%) Query: 13 TAREQQLFNGKNFHVFIYN----KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLER 68 T +E + K++ Y+ +T +H HD E + G I+ + Sbjct: 4 TLKENRNHGTKDYPYSQYHVFNQQTAFQFPIHWHDELEIIYIRNGSINITIDNELFTGTG 63 Query: 69 GDFVFIPLGSHHQSFYEFGATRILNVGISKRFF----EQHYLPLLPYCFVASQVYRTNN- 123 G F + G H + F + +L +S V T++ Sbjct: 64 GSFFIVNPGELHYMGSNDLNADYYTILFPLEFISFQSNDYVENMLFKPMRSSHVILTHSL 123 Query: 124 -------AFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYRE--EQVIDDVPQWL 174 ++ +E +I + + +++ +++ + + + + Sbjct: 124 PYSEIYAEIISLLEKLIYINKYEKGFYQLDCKILLLEILSNILSIPDILVKKTSNASDMR 183 Query: 175 KSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQL 234 + + ++D + L ++ S++Y++R ++++ T + +N +R+ +AK L Sbjct: 184 REIITYVNDN-YLEKITLSDLADEFHMSEKYISRYFKKHFNITFSKYVNHMRLLYAKNLL 242 Query: 235 EMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 + TN S+TD+A +G+ + S FI++FK+ TP SYR Sbjct: 243 DTTNISITDVALSSGFPNVSYFIRSFKESYGKTPFSYR 280 >UniRef50_Q65MB5 Probable transcriptional regulator n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65MB5_BACLD Length = 281 Score = 164 bits (415), Expect = 3e-39, Method: Composition-based stats. Identities = 56/254 (22%), Positives = 97/254 (38%), Gaps = 15/254 (5%) Query: 35 SISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQ-SFYEFGATRILN 93 ++ H H+ YE +L+G IN E+G + I H+ S E + Sbjct: 25 EMNAPHVHEGYELYYLLSGERTYFINQSVYTAEKGTMIIINPHDLHRTSSTEVQEFERIL 84 Query: 94 VGISKRFFE-------QHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEF 146 + S F E LP + R A + + L++ G E+ Sbjct: 85 INFSHDFIEPLLKCSHYRLLPFPENQNFIAFSLREQAAVEHMLMEMKKECKLKKEGHEDV 144 Query: 147 VEMVTFYVINRLRHY------REEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSA 200 V + F ++ + + + + + + + ++ Q L+ + Sbjct: 145 VRALLFQLLFTIYRSLAGGGRNQTRPLHPMDEKISEIASYINCSFQ-ETMTLDGLAGQFY 203 Query: 201 KSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTF 260 S YL+R ++ G + I IRI AKK+L T+ + DIA + G+ S F K F Sbjct: 204 ISPSYLSRVFKKVTGFHLQEYIRHIRIREAKKRLRDTDEKILDIAADTGFKHISHFNKVF 263 Query: 261 KKLTSFTPKSYRKK 274 K++ P YRKK Sbjct: 264 KEIVGIPPLQYRKK 277 >UniRef50_C0CH60 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CH60_9FIRM Length = 278 Score = 163 bits (414), Expect = 4e-39, Method: Composition-based stats. Identities = 54/253 (21%), Positives = 104/253 (41%), Gaps = 7/253 (2%) Query: 29 IYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGA 88 + + + S H H + E V++G + ++ GD V IP H G Sbjct: 26 VKDDKDWNSVFHTHHFTELFYVVSGEGKFLFRNETHHIKTGDLVIIPPYLEHTEQSVKGK 85 Query: 89 T-RILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFV 147 + +GI K F F +R ++ ++ + + G E Sbjct: 86 SLEYYVIGIDKISFLAENGQTGIQAFCN---FRDQSSVSDIFAQMLYEMRNDDYGSEIIC 142 Query: 148 EMVTFYVINRLRHYREEQVIDDVPQWLKS---TVEKMHDKEQFSESALENMVALSAKSQE 204 + + +I R+ + I + + +++ D L+ + +L+ ++ Sbjct: 143 QNLLEILILRIIRSQRLIPISINSERMTKECAQIKEYLDTNYTERITLDTLTSLTHMNKY 202 Query: 205 YLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLT 264 Y+ + +Y G +P+Q +N R+ A L T++SV+DIA G+SS S F ++F+K Sbjct: 203 YMAHSFAKYAGLSPIQYLNRRRLKIACTLLRDTDHSVSDIASSTGFSSQSYFTQSFRKYY 262 Query: 265 SFTPKSYRKKLTE 277 TP YR++ E Sbjct: 263 GMTPLQYRQQNAE 275 >UniRef50_D1N7W9 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N7W9_9BACT Length = 317 Score = 163 bits (413), Expect = 5e-39, Method: Composition-based stats. Identities = 70/279 (25%), Positives = 120/279 (43%), Gaps = 23/279 (8%) Query: 13 TAREQQLF-NGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDF 71 R+Q +G N H ++ H H++ E +L+G +NG++ LLE Sbjct: 37 AGRKQSFIPSGGNLHYHSLPSGGTVE--HSHEFGELIFLLSGSIIHRVNGEKQLLEPNSV 94 Query: 72 VFIPLGSHHQSFYEFGATRILN----------VGISKRFFEQHYL-----PLLPYCFVAS 116 VF+ H GA V IS+ + +L +LP F Sbjct: 95 VFVRPDDRHGFLPAPGAPDCELLLLSFHLELFVTISRYLEDDAFLHRYTESVLPAVF--- 151 Query: 117 QVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQV-IDDVPQWLK 175 +V + L+ +++ + + +++ + R +E D P+WL+ Sbjct: 152 RVPESRMNELSLELLSLNAQGITPAIRKIRFKVLLAELFTRFFLPQEAAPGSSDAPEWLE 211 Query: 176 STVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLE 235 S EKM E F L+ M LS + EYL + +++ ++P + INE+RIN A + L Sbjct: 212 SLCEKMKTPENFI-PGLKRMQQLSGYTPEYLCKVFRKHLDRSPTEFINELRINHAARLLA 270 Query: 236 MTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 + S+ ++A+ + S S F F+K S TP YRK+ Sbjct: 271 DSGESIAELAYRLNFQSLSRFYHLFRKQYSCTPAEYRKR 309 >UniRef50_C6D710 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D710_PAESJ Length = 289 Score = 163 bits (413), Expect = 6e-39, Method: Composition-based stats. Identities = 58/260 (22%), Positives = 101/260 (38%), Gaps = 16/260 (6%) Query: 35 SISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATR-ILN 93 S+ H H YEF + +G I ++ GD + + H++ + Sbjct: 31 SMDTTHYHRSYEFFYLYSGERKFFIRDSVYQIQSGDLILVNTNDVHRTSELSQPNHERIV 90 Query: 94 VGISKRFFEQH--------YLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEE 145 + FF+ P + + E+++ L G + Sbjct: 91 LHYDLPFFDGLSREETELLLSPFASAHPIIKLNLQERMHLEALFESLLRELQECPPGYQL 150 Query: 146 FVE-MVTFYVINRLRHYREEQVIDDV---PQWLKSTVEKMHDKEQFSES-ALENMVALSA 200 V M T ++ RH + + + + P K T H + F E L+ + Sbjct: 151 HVRNMATEILLFTARHALKRKSLPSIELTPVQQKVTDIIRHINQHFREPLPLDELAKQFF 210 Query: 201 KSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTF 260 S+ +L+R + G Q IN RI A+ L+ T++S+T I+ G+ + S F K F Sbjct: 211 ISKGHLSRVFKEVTGFGFSQYINVTRIKEAELLLKETDWSITQISERCGFENFSHFGKVF 270 Query: 261 KKLTSFTPKSYRKKLTEFNQ 280 K+L+ +P+ YRK E NQ Sbjct: 271 KELSGLSPRDYRK--LEQNQ 288 >UniRef50_C6D3L6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3L6_PAESJ Length = 305 Score = 163 bits (413), Expect = 6e-39, Method: Composition-based stats. Identities = 57/278 (20%), Positives = 100/278 (35%), Gaps = 26/278 (9%) Query: 25 FHVFIYN-KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSF 83 FH+ Y K ++ LH+H++ E + G E G + GD I G H Sbjct: 18 FHIEPYELKQGTMIPLHRHEFVELVFIKQGSGLHEYEGNTFPITAGDVFIIEPGMDHAYT 77 Query: 84 YE-FGATRILNVGISKRFFEQHYLPLLPYCFVASQVY-------------------RTNN 123 E ++NV E+ L Y R Sbjct: 78 VEQSEGMEVVNVLFVPALLERELAVLSGVTSFIDFYYMEPFLRSDVSFQAKLTLSPRQMM 137 Query: 124 AFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQW-----LKSTV 178 +E ++ +E+G + ++ + L +P + + + Sbjct: 138 DIRGILEQLMKEYGNKESGYQFLIKSKLIELFIILSRIYANNRNHSLPSIQNDGEMIARI 197 Query: 179 EKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTN 238 + + Q +LE + ++ SQ T ++ G + ++ N+ RI AK+ L ++ Sbjct: 198 CEFIKRHQAHPLSLEQISQMAGMSQSKFTLLFRQMTGMSFVEFRNDQRIQLAKQLLAASS 257 Query: 239 YSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 + IA + GY S F FKKLT TP YRK++ Sbjct: 258 DKIARIALDTGYEDLSHFNHVFKKLTGETPSLYRKRMK 295 >UniRef50_A8SQD4 Putative uncharacterized protein n=2 Tax=Coprococcus RepID=A8SQD4_9FIRM Length = 300 Score = 163 bits (413), Expect = 6e-39, Method: Composition-based stats. Identities = 51/281 (18%), Positives = 93/281 (33%), Gaps = 17/281 (6%) Query: 10 EIATAREQQLFNGKNFHVFIYNKT----ESISGLHQHDYYEFTLVLTGRYFQEINGKRVL 65 A +E + + Y+ +H HD E V G EI+G++ Sbjct: 1 MYAELKENHPHGTREYPFCEYHMRYFPHAFQIPVHWHDEMEIIYVRKGPLTVEIDGQKFT 60 Query: 66 LERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNN-- 123 E G G H F L T Sbjct: 61 GEDGSVFIASPGVLHMMSAPDTPVDYFTFIFPLEFISFQTKDALEDEVFFPLRNHTRGFR 120 Query: 124 ----------AFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYRE-EQVIDDVPQ 172 + ++ ++ T + V + +++ L Y + E++ + Sbjct: 121 PEVADRKLLGKLIPILDELVEENGKMGTHRQIQVRIRLLQMMDLLVEYSQLEELTRNASG 180 Query: 173 WLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKK 232 L+ + L + S++Y++R + T Q +N +R+ +A+ Sbjct: 181 ELEKEILLYIQDNYHDNIGLAELSEHFHLSEKYMSRLFSERFHMTLTQYVNYVRLRYARH 240 Query: 233 QLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 LE T+ SVT+IA ++GY + S FI+ F +P YR Sbjct: 241 LLESTDLSVTEIAMKSGYQNVSYFIRRFSSAMGESPLRYRN 281 >UniRef50_C5EE80 Helix-turn-helix domain-containing protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EE80_9FIRM Length = 323 Score = 163 bits (413), Expect = 6e-39, Method: Composition-based stats. Identities = 58/289 (20%), Positives = 94/289 (32%), Gaps = 26/289 (8%) Query: 14 AREQQLFNGKNFHVFIYNKT-----ESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLER 68 E F + +Y H H EF VL G + ++ Sbjct: 12 LEEITCHGSPAFPMEVYLDNLDLYPNRFIPWHWHKELEFVYVLEGTIEFQTGVSTYVIGS 71 Query: 69 GDFVFIPLGSHHQ----------SFYEFGATRILNVGISKRFFEQHYLPLL----PYCFV 114 G +P H + A L G+S E+ Y+ L F Sbjct: 72 GQGGLVPSNMLHMVSPYHRQHGSIYCAVLADSYLLHGLSGGLIEEQYISALFRPETDFFF 131 Query: 115 ASQVYRTNNAFLTYVETVISSLNLRETGL----EEFVEMVTFYVINRLRHYREE--QVID 168 + L + + R G + V+ + L +E V D Sbjct: 132 LDGTSPWHAGVLACIHEMYQCDCSRPRGYLWKLQILVQQAGLILFENLDMKQEPCPSVHD 191 Query: 169 DVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRIN 228 Q ++ +E +H KE LE++ + S R + ++P+ + R+ Sbjct: 192 SRYQRVRCCLEYIH-KEYAGRLRLEDIARAANVSVSECCRDFKEVLSQSPVDYLISYRVR 250 Query: 229 FAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 + L ++ SV +IA G+S S F TF + TP YRK L E Sbjct: 251 MGEYMLAHSDKSVLEIALAVGFSGSSHFSNTFCRYMGCTPLYYRKHLME 299 >UniRef50_C0EGE3 Putative uncharacterized protein n=2 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGE3_9CLOT Length = 371 Score = 163 bits (413), Expect = 6e-39, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 99/255 (38%), Gaps = 19/255 (7%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISK 98 LH H+++E V +G + +G+ L +G H + ++N+ + K Sbjct: 108 LHTHEFFELIYVYSGTCYCNFSGEEFCLSKGTIWIFNTQCAHSVVIPDDGSTLVNILLRK 167 Query: 99 RFFEQHYLPLLPYC-----FVASQVYRTN-------------NAFLTYVETVISSLNLRE 140 F L ++ F +Y N + Y+ +I + Sbjct: 168 STFSSAILNMIQDNDLFLDFFLKSIYDANTQPHHMQFQAQPGSEIEFYIFKIILEYANQS 227 Query: 141 TGLEEFVEMVTFYVINRL-RHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALS 199 + ++++ ++ L R Y+ +D + + + +++ L++ Sbjct: 228 NYRQSIMKLMLSTLLTELARDYQLRSETEDKTASIDILNIIAYISDHYTDVTLKSTAEHF 287 Query: 200 AKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKT 259 S +Y+++ +Y G + ++ + +++ A+ L T + +A GYS S F + Sbjct: 288 HYSPDYISKCIYKYTGYSFLEYMKRYKLSKAEYLLLHTKLPLEQVASMVGYSQRSSFDRE 347 Query: 260 FKKLTSFTPKSYRKK 274 FKK S TP YR + Sbjct: 348 FKKHYSLTPSRYRSQ 362 >UniRef50_A6TKQ3 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TKQ3_ALKMQ Length = 282 Score = 163 bits (413), Expect = 7e-39, Method: Composition-based stats. Identities = 62/271 (22%), Positives = 116/271 (42%), Gaps = 17/271 (6%) Query: 23 KNFHVFIYNKTESISGL--HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH 80 ++FH + L H HD YE +L+G I + ++ G V I H Sbjct: 13 RSFHFSAREVFGHYTMLSNHFHDQYEIYYLLSGERHYFIKDRIFHVKSGTLVLINRQDVH 72 Query: 81 QSFYEFGATRI-LNVGISKRFFEQ--HYLPLLPYCFVASQ-----VYRTNNAFLTYVETV 132 ++ + + + SK + + + LL F+ + + ++ + Sbjct: 73 RTTDADTQDHVRVLLNFSKDYLLSSPYVIALLDGLFMNNNYVIPFLSAEQQYVEVLLDKM 132 Query: 133 ISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVID------DVPQWLKSTVEKMHDKEQ 186 I + + TG + ++ + ++ Y E D V + + V+ ++ Q Sbjct: 133 IHEIEHQSTGFQVALQALLMDLLVYTSRYIESNRHDVLAPPSQVHEKISQIVQYINTNYQ 192 Query: 187 FSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAF 246 + L ++ SQ YL+R ++ G T ++ IN IRI A++ L TN+ V DI+ Sbjct: 193 -TPLTLSSVAQNFFVSQYYLSRTFKQATGFTFVEYINNIRIREAQRLLRETNHKVIDISE 251 Query: 247 EAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 G+ S S F + FK++T F+P +YR+ TE Sbjct: 252 AVGFGSISHFGRVFKEVTRFSPLNYRRLNTE 282 >UniRef50_B7AP83 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AP83_9BACE Length = 278 Score = 163 bits (412), Expect = 7e-39, Method: Composition-based stats. Identities = 49/253 (19%), Positives = 94/253 (37%), Gaps = 16/253 (6%) Query: 35 SISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGA------ 88 + H HD YE + +G ++ + G V IP G H++ Y Sbjct: 21 RMDETHSHDCYELVYLFSGECNILVSHTIYRMVPGTLVIIPPGEIHKTSYGSNDKVRQQR 80 Query: 89 ---------TRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLR 139 T L + K F + + + + Y N E + Sbjct: 81 TALRFSIKDTDWLCSALGKDFVKDNLTAGIIEVPDKRKEYIENLITRMIYENQMPDELSM 140 Query: 140 ETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALS 199 F E + F + +L ID ++ +++ + L+++ Sbjct: 141 GMVKTLFQEFMIFVLRCKLYGDTSAHEIDAQNSTIQDVATYVYNNYD-KQIYLDDVAKQF 199 Query: 200 AKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKT 259 + S+ YL++ ++ G + + +RI A + L TN+S+TDIAF G++ + F Sbjct: 200 SISRSYLSKKFKQTTGFGFKEYLLNVRIKEACRLLLETNHSITDIAFACGFNDSNYFGDA 259 Query: 260 FKKLTSFTPKSYR 272 F+++ +P YR Sbjct: 260 FRRIKGISPNKYR 272 >UniRef50_C0E9Q1 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E9Q1_9CLOT Length = 333 Score = 163 bits (412), Expect = 7e-39, Method: Composition-based stats. Identities = 61/265 (23%), Positives = 118/265 (44%), Gaps = 21/265 (7%) Query: 36 ISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVG 95 I H HD++E V +G++FQEING ++ +G + LG+ H+ + E + N+ Sbjct: 63 IPPEHSHDFFEIIYVYSGQFFQEINGISIVQNKGQSALLNLGAKHKVWVEHSDDIVFNIL 122 Query: 96 ISKRFFEQHYLPLLPYC-----FVASQVYRTNNAFLTYVETVISSLNL-----------R 139 I K EQ +L L+ F + +Y N+ + + L+ R Sbjct: 123 IRKSMVEQVFLQLISKNNLISSFFLNSLYGMNSKKNLLLFDQMEELDEIFCGIIREYYDR 182 Query: 140 ETGLEEFVE---MVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM--HDKEQFSESALEN 194 + EE + + F + R+ + R +Q +++ + +V KM + + ++ L++ Sbjct: 183 DFLYEENIIGRLVQLFSIWARIYYKRNDQEKNEITEIENDSVIKMLDYIQSHYNTVTLDD 242 Query: 195 MVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPS 254 + S+ +++R + + + +I+N+++I A L T V I+ G+ S Sbjct: 243 LANYLGYSRRHVSRLLKMHTNRNLSEIVNDLKIKNACIYLNNTGLPVDKISEIIGFKESS 302 Query: 255 LFIKTFKKLTSFTPKSYRKKLTEFN 279 F K FKK + YR+ L N Sbjct: 303 YFYKIFKKQMGCSISKYRQTLKTGN 327 >UniRef50_B5CQG2 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CQG2_9FIRM Length = 277 Score = 163 bits (412), Expect = 7e-39, Method: Composition-based stats. Identities = 44/244 (18%), Positives = 92/244 (37%), Gaps = 9/244 (3%) Query: 37 SGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGAT-RILNVG 95 S H H + E VL+G + + + + D + I H + +G Sbjct: 34 SYPHTHYFTELFFVLSGSGSFLVEDETFPIAKHDLIVINPNITHTEKSSLEDPLEYIVLG 93 Query: 96 ISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVI 155 + +++ ++ + Y T++ + E+ + + ++ Sbjct: 94 VDGL----NFVIDDANEYLLFHSDEMKDRLDFYFRTILEETENSQKDYEKVCQNLLNILV 149 Query: 156 NRLRHYREEQV----IDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQ 211 L Y V + S ++ D L+ + ++ ++ Y + Sbjct: 150 VHLSRYASSSVEIFPFHKMESRECSRAKRYIDSSFRENITLDKLAEIAQINKYYFSHTFT 209 Query: 212 RYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSY 271 YG +PM + + RI +++ L T+ S+ IA + G+SS S F + F+K TP +Y Sbjct: 210 ETYGISPMNYLTQKRIFTSQELLTSTDMSLAQIAQQCGFSSSSYFTQCFRKSCGMTPTAY 269 Query: 272 RKKL 275 RK+ Sbjct: 270 RKQF 273 >UniRef50_A8S1Q1 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8S1Q1_9CLOT Length = 322 Score = 163 bits (412), Expect = 7e-39, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 97/259 (37%), Gaps = 22/259 (8%) Query: 38 GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGIS 97 H H+Y E + G ++G+ + L+ G+ +F+ + + +N I Sbjct: 63 PEHTHNYVEVIYMCRGETTHVVDGRELKLKEGELLFLNQHAVQEIQPAGQDDIAVNFIIL 122 Query: 98 KRFFEQHYL----------PLLPYCFVASQVYRTNNAFL--------TYVETVISSLNLR 139 FF+ + + C Y F VE ++ SL Sbjct: 123 PEFFDTAFRMMGEEENLLRDFIVGCLCDDTRYGRYLHFQIADVLPVQNLVENLVWSLMHE 182 Query: 140 ETGLEEFVEMVTFYVINRLRHY----REEQVIDDVPQWLKSTVEKMHDKEQFSESALENM 195 G++ + ++ L HY R + + + + + E + E +L + Sbjct: 183 REGMQAMNQTTMGLLLRHLMHYTGRIRVNRDSEQSFEQQLTLQVLRYIDEHYREGSLTEL 242 Query: 196 VALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSL 255 AL +L+RA R G+ +++ R+N A L T V D++F GY + S Sbjct: 243 AALMGYDVYWLSRAINRLLGRNYKELLQIKRLNQAAFLLHSTRMPVADVSFAVGYDNTSY 302 Query: 256 FIKTFKKLTSFTPKSYRKK 274 F + F+ +PK YRK Sbjct: 303 FYRIFRTYYGMSPKEYRKN 321 >UniRef50_C5RKC4 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RKC4_CLOCL Length = 292 Score = 163 bits (412), Expect = 8e-39, Method: Composition-based stats. Identities = 52/266 (19%), Positives = 96/266 (36%), Gaps = 19/266 (7%) Query: 26 HVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYE 85 H+ E+ LH H +EF +L+G I K ++ G+ +FI H + Sbjct: 24 HLNYAEGLENFFYLHWHSEFEFVYILSGAILYSIEDKEYCVKAGEGLFIHSNQLHAARSF 83 Query: 86 FG-ATRILNVGISKRFF---------EQHYLPLLPYCFVASQVYRTNNAFLTYVETVISS 135 G V F + P+L V ++ + V ++S Sbjct: 84 NGMPCEACVVLFHPNLFGHNKQSSTYSKFIYPILEGDLVFENYFKCEEEWQRLVMKLLSE 143 Query: 136 LNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM--------HDKEQF 187 L+ + E++ I + H + + PQ K+ K+ + E + Sbjct: 144 LDDLKYENVSENELLLKSKIFEIWHLCYKNSVALAPQGRKNRNYKLERMQPVLNYIHENY 203 Query: 188 -SESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAF 246 E L + + S+ A + +P+ + RI + L T++ + DIA Sbjct: 204 KEEITLMALAKILPMSEGQFCHAFKEVMNISPIAYVIRHRILQSCTLLTETDWKIADIAR 263 Query: 247 EAGYSSPSLFIKTFKKLTSFTPKSYR 272 G+++ S F + F K +P YR Sbjct: 264 NVGFNNISYFNREFIKAIGCSPSKYR 289 >UniRef50_C6D3L4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3L4_PAESJ Length = 287 Score = 163 bits (412), Expect = 8e-39, Method: Composition-based stats. Identities = 52/255 (20%), Positives = 100/255 (39%), Gaps = 18/255 (7%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSF-YEFGATRILNVGISK 98 H HD+YE V +G IN + GD IP + H++F EF + + Sbjct: 33 HLHDWYEIVFVYSGTGTFFINHSFYEMNPGDAFLIPGNTVHRAFPDEFSPVTSSAIFFAP 92 Query: 99 RFFEQHYLPL---LPYCFV---ASQVYRTN------NAFLTYVETVISSLNLRETGLEEF 146 RF + L CF S+ Y+ AF ++ + R Sbjct: 93 RFIQPMEFGESHSLLRCFEQARKSKSYKLETSPDKREAFSGLIDVMNEEWLNRLPSYRAA 152 Query: 147 VEMVTFYVINRLR-----HYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAK 201 + + + + L + P W+++ ++ + E +L ++ + ++ Sbjct: 153 IAVRLYDFLIALNRMALTETEHTRSSSAEPSWIRTILDYIDAHIGSQEMSLADLSSKASV 212 Query: 202 SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFK 261 + + +R +++ G + I +I AK++L +T ++ + G+ S S F K FK Sbjct: 213 TYAHFSRVFKQHTGMNVSEYILIKKIMLAKEKLMLTGDTIASVCLACGFESESYFYKKFK 272 Query: 262 KLTSFTPKSYRKKLT 276 +T TP YR+ Sbjct: 273 LITGMTPVEYRRSCR 287 >UniRef50_A5ZUG1 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZUG1_9FIRM Length = 277 Score = 163 bits (412), Expect = 9e-39, Method: Composition-based stats. Identities = 58/252 (23%), Positives = 106/252 (42%), Gaps = 14/252 (5%) Query: 30 YNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGAT 89 + + + S H H + E V G I + +++ D + + H + Sbjct: 27 HYEEDWPSIPHTHAFTELFYVSEGSGEFLIENQHFSIKKDDLIIVNPHIQHTEISLSASP 86 Query: 90 RILNV----GISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEE 145 GIS F +Q + Y ++ + L Y ++ L+ + G EE Sbjct: 87 LSYYTVGVDGISFSFHDQKEFQIFHY-------HQKHADLLFYFHSLFQELDEKNDGYEE 139 Query: 146 FVEMVTFYVINRLRHY--REEQVIDDV-PQWLKSTVEKMHDKEQFSESALENMVALSAKS 202 + +I++LR + + Q+ P + V++ D + LE + +LS + Sbjct: 140 ICKHTLAILISQLRRFAVSDFQLFPSFHPSKECALVKRYLDSHYSDDINLEQLASLSHLN 199 Query: 203 QEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKK 262 + YL+ RYYG +P+ + RI K LE T++ ++DIA AG+SS S ++F+K Sbjct: 200 KYYLSHEFTRYYGISPISYLTHRRIEVCKNLLENTDHEISDIAHLAGFSSQSYLAQSFRK 259 Query: 263 LTSFTPKSYRKK 274 T YR+ Sbjct: 260 YCGMTAGEYRRS 271 >UniRef50_UPI000178AA6A transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178AA6A Length = 285 Score = 162 bits (411), Expect = 9e-39, Method: Composition-based stats. Identities = 51/284 (17%), Positives = 108/284 (38%), Gaps = 22/284 (7%) Query: 12 ATAREQQLFNGKNFHVFIYN-----KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLL 66 T RE F + ++ + + + H H++ E ++G E Sbjct: 3 KTLREPMTMPDPQFPIKVHRCEFDGRGQVLFNHHWHEHLEILYFVSGEATLECGSTTFTA 62 Query: 67 ERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYL---------PLLPYCFVASQ 117 + GD + I H + + + H L P+ + Sbjct: 63 KEGDMIVINRNELHYGLSQSDHLFYYALIADFSLLQSHSLDAPEMKFITPITQNRLIFEN 122 Query: 118 VYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVI--DDVPQWLK 175 +A + ++I L +E G E ++ + ++ L V+ D+ + +K Sbjct: 123 RISGADALAPML-SIIKELERQEFGYELAIKSELYRLLTLLLRGYVATVLTQDEYVERMK 181 Query: 176 ST-----VEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFA 230 + + K ++ + ++E + ++ S+ + +R + G+T + +NE R+N A Sbjct: 182 NVERFAPIFKYIEEHYREDLSVEQLSGMAGLSRFHFSRLFKEISGRTVTEYVNETRLNRA 241 Query: 231 KKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 L + +V++IA G++ F +TFKK P + RKK Sbjct: 242 DYLLRESPLTVSEIAAATGFNDIYYFSRTFKKYKRMAPSALRKK 285 >UniRef50_C7GFI0 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C7GFI0_9FIRM Length = 291 Score = 162 bits (411), Expect = 9e-39, Method: Composition-based stats. Identities = 54/261 (20%), Positives = 104/261 (39%), Gaps = 10/261 (3%) Query: 20 FNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSH 79 F + + Y + S H H + E V++G+ I V + D + I Sbjct: 18 FKLRYISISKYE-GDWQSHPHTHQFSELFYVISGKGVFYIENDTVSVCADDLIIINPHIE 76 Query: 80 HQSFYEFGATRILNV----GISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISS 135 H V G++ F Q+ Y + +T+ F+ + + +I Sbjct: 77 HTEKTMSNDPMTYIVFGVEGLAFYFNSQNAANPKGYSYYNYGSAKTH--FINFSQIMIKE 134 Query: 136 LNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTV---EKMHDKEQFSESAL 192 N R+ G E + ++ + + VI D + +K D L Sbjct: 135 FNARKPGFEAICHGLLQVLLVYITREQHLSVISDTTLQISKECFVAKKYIDANYAKNITL 194 Query: 193 ENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSS 252 + + ++ ++ YL+ + Y G +P+ + E R+ +K+ L ++ S+ ++A G+SS Sbjct: 195 DLLAEITHINKFYLSHSFTEYVGTSPINYLMETRLAASKELLLSSSRSIAEVASSTGFSS 254 Query: 253 PSLFIKTFKKLTSFTPKSYRK 273 S F + F+K T +P YRK Sbjct: 255 QSYFSQIFRKNTGMSPLQYRK 275 >UniRef50_A7VID9 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A7VID9_9CLOT Length = 289 Score = 162 bits (411), Expect = 9e-39, Method: Composition-based stats. Identities = 49/285 (17%), Positives = 108/285 (37%), Gaps = 18/285 (6%) Query: 14 AREQQLFNGKNFHVFIYN----KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 +E + K+ Y+ +H HD +E V +G I+G+ + + G Sbjct: 5 LKENKPHGTKDDPFSTYHIENAGQSFQIPVHWHDEFEIIYVKSGFLTVNISGENYIGKPG 64 Query: 70 DFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVY-------RTN 122 D + G+ H + G ++ + +L + Sbjct: 65 DAFVVSPGNLHFMGSKTGTVDYFTFLFPLKYISFYTDDILDDRLLEPLDSGRLMISPSVK 124 Query: 123 NAFLTYVETVISSLNLRETGLEEFVE-------MVTFYVINRLRHYREEQVIDDVPQWLK 175 + E +I +++ E + ++ +++ + ++ Sbjct: 125 DTIKELCEQLIEIYEAKKSERELNITTQIKTKIILLQFILEMWEKGFIVENNTSGRNIVE 184 Query: 176 STVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLE 235 + + + +L+ S++Y++R + ++ T Q + +R+ +AK+ L+ Sbjct: 185 KEMVSYIQQNFTGKISLKEFGEQFHLSEKYISRYFKEHFHITLSQYVAYLRLEYAKQLLQ 244 Query: 236 MTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 T+ SVT+ A +GY + S FI++FKK +P YRKK + Q Sbjct: 245 DTDISVTEAAMRSGYQNISYFIRSFKKTYGVSPLKYRKKQVDCMQ 289 >UniRef50_C0ECP2 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0ECP2_9CLOT Length = 327 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 43/265 (16%), Positives = 103/265 (38%), Gaps = 18/265 (6%) Query: 31 NKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATR 90 H+H ++EF V +G++ ++ + ++L + + + H + E + Sbjct: 62 QPNTHPMKPHKHIFFEFVYVYSGQFHSVVDSESLVLGQDQVILLNPNQVHAPYIERDSDL 121 Query: 91 ILNVGISKRFFEQHYLPLLP-----YCFVASQVYRTNNA-----------FLTYVETVIS 134 +LN+ I + ++ + L+ + F + +Y + A + +++ Sbjct: 122 VLNILIKQPLIDRTFASLISRDNILFDFFYNYIYGISGASNYLMVDRTPRVDQIISSIVE 181 Query: 135 SLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMH--DKEQFSESAL 192 R E+ + + L E+ + + K + ++ +E ++ L Sbjct: 182 EYCERRPLFEQSLIGWIINLFTELARVYSERKTNQPARPAKPGMAEIIGFIRENYATVTL 241 Query: 193 ENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSS 252 + S YL+ ++ G+T +I+ + RI A L+ T ++ I+ G+ Sbjct: 242 SETAKTFSYSPSYLSYLIKKETGQTFKEIVRDFRIESACNFLKNTQLTLEQISEILGFQD 301 Query: 253 PSLFIKTFKKLTSFTPKSYRKKLTE 277 K FK+ +P YRK+ + Sbjct: 302 SFYIAKVFKQRYGISPSEYRKRSRQ 326 >UniRef50_C6PBN1 Transcriptional regulator, AraC family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PBN1_CLOTS Length = 295 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 58/267 (21%), Positives = 110/267 (41%), Gaps = 17/267 (6%) Query: 27 VFIYNKTESISGLHQHDYYEFTLVLTGRYF-QEINGKRVLLERGDFVFIPLGSHHQSFYE 85 +F + + H H+ E + VL+G+ I+G E+GD V I + H Sbjct: 19 IFHTSDDAQLVPRHWHESIEISYVLSGKIDDIYIDGIHYTSEQGDIVLINSNAIHSFSVV 78 Query: 86 FGATR-ILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLE 144 G R + IS F + +Y + F + + + + + +L+ Sbjct: 79 QGKNRKAVTFFISYEFLKTNYPDIDQIAFDCVSIDQNDEHKIKIFNELRENLDSIIRAFS 138 Query: 145 EFVE-------------MVTFYVINRLRHYREEQVIDDVPQWLKSTVEK-MHDKEQFS-E 189 + + + ++ + ++ ++L E + KE +S + Sbjct: 139 NLRDDSLAHIKVIGLSYELIYLLLKNFKISKKSFGEIKTKKYLDRLTEITNYIKENYSQD 198 Query: 190 SALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAG 249 +++ + A S EYL+R ++Y G T IN +R+ + + L T+ S+T+IA E G Sbjct: 199 LSIDIISAKFNLSPEYLSRFFKKYMGMTIHNYINTVRLEKSYRDLMNTDQSITEIALEHG 258 Query: 250 YSSPSLFIKTFKKLTSFTPKSYRKKLT 276 + + F K FK + TP YRKK+ Sbjct: 259 FPNEKSFNKVFKTFYNITPNQYRKKIK 285 >UniRef50_C3X327 AraC family transcriptional regulator n=1 Tax=Oxalobacter formigenes HOxBLS RepID=C3X327_OXAFO Length = 289 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 52/260 (20%), Positives = 95/260 (36%), Gaps = 20/260 (7%) Query: 38 GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEF-------GATR 90 LH H+ YE +V G + I GD I H + + Sbjct: 27 PLHCHEEYELVIVTAGTGREYIGHAVENYRAGDMTLIGPDIPHLHLCDSLTGKNGSEESA 86 Query: 91 ILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFL----TYVETVISSLNLRETGLEEF 146 + S F + + Y +A+ + ++ + + + G Sbjct: 87 CEILYFSPSLFPDNMDGIAEYRAIAAVLEKSRRGVRYSDPALTRQIRKQVQRLDKGQGIG 146 Query: 147 VEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM--------HDKEQFSESA-LENMVA 197 +++ L +E +I P + + + + +E F E+ L+ + Sbjct: 147 RIRWLLALLDTLARSQETSLIASGPVRNGTALRRQETVDTVCRYLREHFRENLCLQAIAR 206 Query: 198 LSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFI 257 + + L R ++ GKT + IRI A + L T S++ IA+E G+++ S F Sbjct: 207 EACMNPSALCRHFRQRTGKTLFAFLAGIRIENACRLLLETRLSISAIAWETGFANLSHFN 266 Query: 258 KTFKKLTSFTPKSYRKKLTE 277 + FK LT TP YRK + Sbjct: 267 RQFKSLTGQTPGEYRKNIRS 286 >UniRef50_A9KLS8 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KLS8_CLOPH Length = 277 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 52/255 (20%), Positives = 97/255 (38%), Gaps = 15/255 (5%) Query: 35 SISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATR-ILN 93 S+ H H++YE +L+G +N + +G+ + I G+ H++ Y G + + Sbjct: 19 SMKDAHLHNFYEMYYLLSGTRRFFVNDTLYNVSKGELILIEEGALHRTTYISGGSHERIC 78 Query: 94 VGISKRFFE---QHYLPLLPYCFVASQVYRTNNAFLTYVETVIS----SLNLRETGLEEF 146 + SK F + Q + + R + Y E +IS + ++T Sbjct: 79 ITFSKSFLQPLFQEFGEEAVLKCFSQPYVRIPQSRREYFEDLISKAHREMMYQDTYSLYL 138 Query: 147 VEMVTFYVINRLRHYREEQVIDDVPQW-------LKSTVEKMHDKEQFSESALENMVALS 199 + +I + DD+ + + K S LE A Sbjct: 139 ASSHVYELILFILRLNSISKQDDITPYDASPDDQIMEKAAKYICSNYQSPVTLEETAAYC 198 Query: 200 AKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKT 259 S Y ++ + G + + IRI A + L T +T+IA +G++ + F Sbjct: 199 NMSTTYFSKKFKAVTGFGFKEYLISIRIREASRLLLHTKLPITEIALLSGFNDSNYFGDV 258 Query: 260 FKKLTSFTPKSYRKK 274 FK++ +P YRK Sbjct: 259 FKRMKGISPCKYRKN 273 >UniRef50_C6D720 Transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6D720_PAESJ Length = 289 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 62/262 (23%), Positives = 111/262 (42%), Gaps = 16/262 (6%) Query: 26 HVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH-QSFY 84 H + GLH HD++E L+L G ++NG R LL VFI H Sbjct: 17 HYRMIASVHDTIGLHTHDFFELFLILQGSVVHKVNGTRQLLRENTLVFIRDRDVHSYEQT 76 Query: 85 EFGATRILNVGISKRFFEQHYL-------------PLLPYCFVASQVYRTNNAFLTYVET 131 G + +N+ K ++ + P LP + S+ + + + Sbjct: 77 SEGDCQFINLSFYKEVIDELFAFLGAGFPSGKLFEPELPPTLLLSKTEKEYVRY-RLDQI 135 Query: 132 VISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESA 191 ++ L+ + E ++T +R E+ P W + ++M KE F+ Sbjct: 136 NLTPLSQKLVVKAEVRALLTDLFFRYIRITAEKDEPYGQPDWFLALCQEMRKKEHFTRGT 195 Query: 192 LENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 ++ LS KS YL R ++ +P + IN++R+++A+ L T+ + DI+ E G Sbjct: 196 SA-LLQLSGKSHAYLCRVFKQQLRISPTRFINDLRLSYAENLLLNTDMDILDISLETGLE 254 Query: 252 SPSLFIKTFKKLTSFTPKSYRK 273 + S F + FK+ TP +R+ Sbjct: 255 NVSYFYELFKRKHRMTPHRFRQ 276 >UniRef50_C7G755 Transcriptional regulator, AraC family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G755_9FIRM Length = 302 Score = 162 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 54/279 (19%), Positives = 113/279 (40%), Gaps = 18/279 (6%) Query: 14 AREQQLFNGKNFHVFIYN----KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 +E + K+ IY+ +H HD +E V +G I+G+ + + G Sbjct: 18 LKENKPHGTKDNPFSIYHIENAGRSFQIPVHWHDEFEIIYVKSGLLTVSISGESYIGKAG 77 Query: 70 DFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVY-------RTN 122 D + G+ H + G ++ +L + R Sbjct: 78 DAFVVSPGNLHLMGSQTGTVDYFTFLFPLKYISFRTDDMLDDKLLEPLNSGHLMINPRVK 137 Query: 123 NAFLTYVETVISSLNLR----ETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTV 178 ++ E +I E+ + ++ + L +++ VI++ Sbjct: 138 DSAKELCEQLIDIYMAENDETESKITAQIKTKIILLQFILEMWKKGFVIENDTSGRNIVE 197 Query: 179 EKM--HDKEQFS-ESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLE 235 ++M + ++ F+ + +L+ S++Y++R + ++ T Q I +R+ AK+ L+ Sbjct: 198 KEMVSYIQQNFTGKISLKEFGEQFHLSEKYISRYFKEHFHITLSQYITYLRLENAKQLLQ 257 Query: 236 MTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 T+ SVT+ A ++GY + S FI++FKK +P YR Sbjct: 258 DTDLSVTETAMQSGYQNVSYFIRSFKKAYGISPLKYRNS 296 >UniRef50_C7G9X0 Transcriptional regulator, AraC family n=3 Tax=Lachnospiraceae RepID=C7G9X0_9FIRM Length = 303 Score = 162 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 65/298 (21%), Positives = 119/298 (39%), Gaps = 30/298 (10%) Query: 5 VINAPEIATAREQQLFNGKNFHVFIYNKTESISG-----LHQHDYYEFTLVLTGRYFQEI 59 T RE + Y H H EF G I Sbjct: 8 TFKITTDETLRETIQHGNNRYPFAYYPDNIWKFDFHRIDWHWHHELEFLYTAEGTALCLI 67 Query: 60 NGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRF--------FEQHYLPLLPY 111 ++ L +G +FI G H+ F +T N+ S +E++ LP++ Sbjct: 68 GTSKIELHKGCGIFINSGVLHR-FEAQSSTFAPNIVFSPTLLAPENSLIYEKYILPVISS 126 Query: 112 CFVASQVYRTNNAFLTYVETVISSL-NLRETGLEEFVEMVTFYVINRLRHYREE------ 164 V QV+ +N F V ++S + ++ET + E+ T ++ +L + ++ Sbjct: 127 S-VPYQVFSPSNTFGKQVLQLLSQICTIQETKPDN--ELCTIQLLFQLWNILQKNMDWTS 183 Query: 165 -----QVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPM 219 ++ L++ ++ +HD E LE + A ++ S+ Q +P+ Sbjct: 184 DSNSIHRLNHKQARLQAMMQYIHD-HYMEEITLETIAASASISKSGALHIFQTGIHCSPV 242 Query: 220 QIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 + + R+ A +QL +T SV+ IA E G++S F + F++ +P YRK+ TE Sbjct: 243 AYLIQYRLAQAAEQLYITQKSVSSIAEETGFTSSGYFCRKFRQYYHMSPNEYRKRKTE 300 >UniRef50_C0EAQ5 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EAQ5_9CLOT Length = 329 Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats. Identities = 60/268 (22%), Positives = 114/268 (42%), Gaps = 22/268 (8%) Query: 32 KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRI 91 K + H HDYYE V G + V+L +GD + + H + Sbjct: 60 KQKRPPLFHNHDYYEMVYVYRGGCVNNFRDQEVILSQGDVLLMNPNVLHSIHTLREEDCV 119 Query: 92 LNVGISKRFFEQHYLPLLP-----YCFVASQVYRTN--NAFLTY-------VETVISSLN 137 N+ +S+ FE+ L LL F+ S +Y+ N FL + V+ ++++L Sbjct: 120 FNIMLSRSLFEESMLLLLSDNKLLSNFIVSYLYQINTSQEFLYFPSPKNEQVDDIVTNLI 179 Query: 138 LR-----ETGLEEFVEMVTFYVINRLR--HYREEQVIDDVPQWLKSTVEKM-HDKEQFSE 189 TG V+ + + + L + + Q+ D+ L ++ + + + Sbjct: 180 YEFSDRGPTGSASVVQHLLAVLFSLLARIYAEQNQIHTDMHTKLSPLLDIISYINQNSRT 239 Query: 190 SALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAG 249 +L + + S Y++R +++ G++ Q++ ++ A++ L+ T SV +A EAG Sbjct: 240 VSLAVLEEKFSYSAGYISRLIKQHCGQSFTQLVQNAKLQRAREILKNTGTSVVQVAEEAG 299 Query: 250 YSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 + F + FK+ TP YRK E Sbjct: 300 FQDSQYFSRLFKEKFGLTPSQYRKLCQE 327 >UniRef50_C9KN97 Putative AraC-type DNA-binding domain-containing protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KN97_9FIRM Length = 281 Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats. Identities = 59/257 (22%), Positives = 91/257 (35%), Gaps = 13/257 (5%) Query: 31 NKTESISGLHQH-DYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGAT 89 T +H+H D EF L+ G I+G+R ++GD + I H Sbjct: 29 PYTSMPRTMHRHGDVAEFILITEGSGIHIIDGQRYYTQKGDLLLIGQDVVHDESSPANR- 87 Query: 90 RILNVGISKRFFEQHYLPLLPYCFVAS-------QVYRTNNAFLTYVETVISSLNLRETG 142 N+ I LP LP + F +E + + Sbjct: 88 ---NLSIYSGAIRGLQLPNLPAGKFLPPDVLPVLKTEGLFPDFCHLLEFMYRGAQGKGCH 144 Query: 143 LEEFVEMVTFYVINRLRHYREEQVI-DDVPQWLKSTVEKMHDKEQFSESALENMVALSAK 201 EE + + ++ + V+ L + V D L + Sbjct: 145 PEESINHLLCALLLLVMEVTSRSVVLPPEEHHLLAGVRSRLDAAYDETITLAGLAQEFHV 204 Query: 202 SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFK 261 S +L A + YG P+Q I RI A+ L T +T+IA GY+S S F K F Sbjct: 205 STFHLAHAFKAAYGYAPLQYITRRRIGEAQTLLIDTALPITEIAIRTGYNSSSYFNKAFH 264 Query: 262 KLTSFTPKSYRKKLTEF 278 K+T +P+ YRK + Sbjct: 265 KITGMSPRDYRKTYRKI 281 >UniRef50_C6JJH4 Putative uncharacterized protein n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JJH4_FUSVA Length = 300 Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats. Identities = 54/280 (19%), Positives = 103/280 (36%), Gaps = 22/280 (7%) Query: 15 REQQLFNGKNFHVFIY-----NKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 +E + F +Y T H H E + G + EI K+ +L +G Sbjct: 7 KELAVHGNYEFPCAVYFSYVSKYTAGEIDWHWHKEIEIINIYQGTLYVEIENKKFILSKG 66 Query: 70 DFVFIPLGSHH-QSFYEFGATRILNVGISKRFF--------EQHYLPLLPYCFVASQVYR 120 D +FI H I++ +K EQ Y+ L C S + Sbjct: 67 DSLFINSEEMHFMKMNTKEECVIISFVFNKSLICGDKGNNIEQKYIDPLINCKELSALEL 126 Query: 121 TNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREE------QVIDDVPQWL 174 T + S + G E V + ++ + ++ + + + Sbjct: 127 TKEDSKKLAQAYYS-YSNNILGYEIIVRNILSEILLNIIRKNQKLLEKSSNNSNTDKERI 185 Query: 175 KSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQL 234 K + ++ K + +L ++ + + R R G +P++ + + RI A + L Sbjct: 186 KRMLAFIY-KNYSEDISLADIAKEAFIGEREALRCFARTIGISPIEYLLKYRIYTAAEML 244 Query: 235 EMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 + + +I + G++SPS F K F ++ TP+ YRK Sbjct: 245 RNSEQPIAEICLQTGFNSPSYFSKVFCRMLGTTPREYRKN 284 >UniRef50_C9LCE8 Transcriptional regulator, AraC family n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LCE8_RUMHA Length = 287 Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats. Identities = 57/282 (20%), Positives = 116/282 (41%), Gaps = 18/282 (6%) Query: 9 PEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLER 68 E+ E L N + + +TE H HD+ EF +++ G+ I+GK +E Sbjct: 3 KEMYDITEGDL-NPEFLFTCVSTRTEEEQNYHAHDFIEFAVIMGGKGKFYIDGKDYEVEE 61 Query: 69 GDFVFIPLGSHHQSF--YEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFL 126 GDF+ + G++H+S Y + + S F+ P ++ + + Sbjct: 62 GDFILLNPGTYHRSKAGYSKEGLKECYIAFSGVSFKGCKSGYFPSFKGNGKIIKMADRMK 121 Query: 127 TYVETVISSLNL--------RETGLEEFVEMVTFYVINRLRHYREEQVIDDV------PQ 172 + + + +N R L+ ++ + V+ + ++E + Sbjct: 122 KNIFQICTVMNKEARECSAGRYFMLKAYLIQILCLVVREQKEEKQEGEGKGYIFQSTGKK 181 Query: 173 WLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKK 232 ++ + K ++ + +LE + A S Y+ + + G TP+ + +R+ AK+ Sbjct: 182 YVVQQIMKYMEENYREKISLEQIAANMYLSSFYIAKIFKSETGDTPINYLIRLRMEKAKE 241 Query: 233 QLEMT-NYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 LE++ + ++A GYS F K FKK +P Y+K Sbjct: 242 ILEISPEEPIKEVAAAVGYSDAYHFSKLFKKHYGISPLYYKK 283 >UniRef50_D1NB22 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1NB22_9BACT Length = 297 Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 97/258 (37%), Gaps = 21/258 (8%) Query: 37 SGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGI 96 + H+HD+ E ++ G Q ++G + GD I H F E ++NV Sbjct: 39 TEPHRHDFAELVIITAGNGVQVVDGGEYAVSLGDVFLIQGNGAHY-FLERNRVSMINVLY 97 Query: 97 SKRFFEQHY-----LPLLPYCFVASQVYRTNNAFLTYVE--------------TVISSLN 137 + LP F R+ F +++ + L Sbjct: 98 DPARLPLPFGWLRRLPGYNVIFELEPSVRSAETFKHHLKLSAAELAEAVEIVGKLERELE 157 Query: 138 LRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLK-STVEKMHDKEQFSESALENMV 196 G E +I + + +++ ++ + + + E E LE + Sbjct: 158 QDTPGAELAAFQRLLELIVFISRCYDAPPAENLAAVMRVGRIISLLESEFMREWRLEELA 217 Query: 197 ALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLF 256 L+A S L R + G +P+ + +R+ A + L+ T +V +IA + G++ + F Sbjct: 218 KLAATSPNNLLRLFRTVTGTSPVDYLIRVRLRRAAEALKNTPGAVAEIAADCGFADSNYF 277 Query: 257 IKTFKKLTSFTPKSYRKK 274 + F+ +P+ +RK+ Sbjct: 278 ARKFRAAYGVSPREFRKR 295 >UniRef50_C0EIV3 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIV3_9CLOT Length = 307 Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats. Identities = 53/243 (21%), Positives = 98/243 (40%), Gaps = 11/243 (4%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKR 99 H H+ E L+ TG +N + ++GD + G H S I + Sbjct: 29 HWHNEIELILLRTGSSSISVNDRTFEAQQGDLIICNSGDIHYSDAANQQNTIDFIVFDPA 88 Query: 100 FFEQHYLPLLPYCFVAS----QVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVI 155 Q+Y LL + Q +R +ET+ + L+ ++ +E + Sbjct: 89 LLGQNYPSLLCPQHLIPGGFLQEHRLIAPLDHLIETIDAELDEKQLYYQEIITAALREFW 148 Query: 156 NRLRHYREEQVIDDVPQWLKSTVEKMHDK------EQFSE-SALENMVALSAKSQEYLTR 208 RLR ++ D Q +S + E FSE LE ++ S Y ++ Sbjct: 149 FRLRRCIPDEPSDVHLQGQRSEFLYAFHQLLGFLEEHFSEDIPLETAASMIGYSTGYFSK 208 Query: 209 ATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTP 268 +R G + +N +RI A L+ ++ + DIA + G+ + F +TF+++T ++P Sbjct: 209 TFKRLIGINYITYLNMLRIEHAVSCLQSSSDKIIDIALQCGFHNIRTFNRTFREITGYSP 268 Query: 269 KSY 271 + Sbjct: 269 TEF 271 >UniRef50_C9AXT8 Putative uncharacterized protein n=2 Tax=Enterococcus casseliflavus RepID=C9AXT8_ENTCA Length = 308 Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats. Identities = 52/290 (17%), Positives = 106/290 (36%), Gaps = 21/290 (7%) Query: 6 INAPEIATAREQQLFNGKNFHVFIYNK-----TESISGLHQHDYYEFTLVLTGRYFQEIN 60 IN P E ++F + Y E H H E V G+ +N Sbjct: 3 INQPAALAYYEAANHGTEDFPLAYYPNLVSVWREFFFVPHWHKEIEILCVHQGQLELVVN 62 Query: 61 GKRVLLERGDFVFIPLGSHHQSF-YEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVY 119 G ++ V IP + H ++ + R + S++ + + + Sbjct: 63 GFSRKIKANTIVLIPPNTLHTAYRIAQQSCRFSCIVFSEQLITSRQSDRIQSQQIDPFLI 122 Query: 120 RT-----------NNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVID 168 + + LT + + + E ++ + +++ L +Q Sbjct: 123 QEGVTSYVDFPDKSQQSLTLFQLFDQCFMGKSSYRELRLKGIVIQLLSHLLEVGTDQPAK 182 Query: 169 DVPQWLKSTVEKM---HDKEQFSE-SALENMVALSAKSQEYLTRATQRYYGKTPMQIINE 224 + L+ EK+ + + E L+++ + S+E TR ++ + +PM +N Sbjct: 183 KSSERLQEKREKIVLSYIHSNYHEMIQLQDLADSVSLSKEQFTRFFKQSFRTSPMAYLNH 242 Query: 225 IRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 R+ + + L T+ ++ IA G+ + + F FKK+ TP YRK Sbjct: 243 YRLIRSAELLRETDLTMVAIAQAVGFCNSNHFSVCFKKMFGETPTQYRKN 292 >UniRef50_B7CB27 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CB27_9FIRM Length = 291 Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats. Identities = 56/244 (22%), Positives = 106/244 (43%), Gaps = 5/244 (2%) Query: 34 ESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSF-YEFGATRIL 92 E S LH H Y E V G ++ K ++ D V + H E + Sbjct: 44 EWNSTLHTHLYTEIFYVTKGHGLLSLDNKNYPVKEDDLVIVNPLISHTERGIENVNFEYI 103 Query: 93 NVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVE-MVT 151 +GI + C +A+ Y + L Y++T++ + ++T + + ++ Sbjct: 104 VMGIEGVTYFSKEEDEEQGCSIAN-YYEYKHEVLFYLKTILFEVKTKDTEYQSLCQNLLE 162 Query: 152 FYVINRLRHYREEQVIDDVPQWLKS--TVEKMHDKEQFSESALENMVALSAKSQEYLTRA 209 +IN +R + + K +EK D + L+ + L+ ++ ++ A Sbjct: 163 VLLINLMRRANINLKSSPINKANKDCVLIEKYIDAHFKEDITLDTLSELTFLNKYHIVHA 222 Query: 210 TQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPK 269 ++Y G +P+ + + R+ AK L TN +++IA+ G++S S F + FKK T +P Sbjct: 223 FKQYKGISPINYMIQKRLEEAKLLLSTTNLQISEIAYIVGFTSQSYFAQAFKKATLTSPL 282 Query: 270 SYRK 273 YRK Sbjct: 283 QYRK 286 >UniRef50_UPI0001788D00 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788D00 Length = 291 Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats. Identities = 56/257 (21%), Positives = 103/257 (40%), Gaps = 21/257 (8%) Query: 38 GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILN-VGI 96 H HD YE V G+ I K + + GD IP + H SF + + + + Sbjct: 31 PHHLHDLYELVYVYQGKGTFFIENKLMEKKEGDLFIIPGNTIHSSFPDPDQPIVSSALFF 90 Query: 97 SKRFFEQHYLPLLPYCFVA------------SQVYRTNNAFLT-YVETVISSLNLRETGL 143 + L Y ++ Q+ +N A++ ++ + + L + G Sbjct: 91 APSLVLGANGSDLQYSVLSCFEYAQKTGSYRHQLPESNQAYIEDMLKGISEEIRLAQLGF 150 Query: 144 EEFVEMVTFYVINRLRHYREEQVIDDV------PQWLKSTVEKMHDKEQFSESALENMVA 197 E + + ++ + Y + P WL +++ +H+ L + A Sbjct: 151 REALVLQLRSLLLHINRYISTLSAEQTAHSQIGPAWLMDSIQWIHE-HLDQPIGLAALSA 209 Query: 198 LSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFI 257 +A + +R ++Y G ++ RI AK+ L SV IA GY++ + F Sbjct: 210 QAAVDPAHFSRMFKKYTGLHVTGYMHAKRIARAKELLRNHEASVGQIAEICGYATLTHFH 269 Query: 258 KTFKKLTSFTPKSYRKK 274 + FKKLT TP +YR++ Sbjct: 270 RNFKKLTGMTPGAYRRQ 286 >UniRef50_Q187Y6 AraC-family transcriptional regulator n=7 Tax=Clostridium RepID=Q187Y6_CLOD6 Length = 298 Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 104/255 (40%), Gaps = 18/255 (7%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKR 99 H H++ + + G + E + G+ V H + ++ I Sbjct: 34 HWHEHLQIYYFIDGIAYLECGLDNFKVVPGNIVIANSNELHYLESLSDNLKFYSIRIEPT 93 Query: 100 FF---------EQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMV 150 F ++ PL V + + + ++ L + T++ + +E G E ++ Sbjct: 94 FLFSNQVDLLQTKYLAPLALNHIVFNNLIQNDSLILKCITTILDEYHNKEVGYELSIKAN 153 Query: 151 TFYVINRLRHYREEQVIDDVPQWLKSTVE--------KMHDKEQFSESALENMVALSAKS 202 + +I L +++ + +++K + +++ + L+ + + S Sbjct: 154 IYQLIVLLLRSHIDKIYSE-DEFIKRKYSLEKFECIFDLIEEKYMDKITLKELASRVNLS 212 Query: 203 QEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKK 262 + R ++ GKT + IN IR++ A L+ T+ ++T+IA G+ S + F + FK+ Sbjct: 213 AHHFCRTFKQITGKTTIDFINGIRLDKAIYYLKETDLNMTEIAMRCGFDSINYFSRLFKR 272 Query: 263 LTSFTPKSYRKKLTE 277 + +P YR + E Sbjct: 273 NYNISPTKYRNEHRE 287 >UniRef50_C6JJY6 Transcription regulator n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JJY6_FUSVA Length = 288 Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats. Identities = 54/276 (19%), Positives = 108/276 (39%), Gaps = 17/276 (6%) Query: 15 REQQLFNGKNFHVFIYNKTESISGLH----QHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 +E + F Y H H YE +L+G + +I+ ++ GD Sbjct: 7 KEDMVHGSTKFPFAYYYVNSYHPRYHMITHWHKEYEIIRILSGTFNIKIDAVSYTVKTGD 66 Query: 71 FVFIPLGSHHQSFYEFGATRILNVGISK-----RFFEQHYLPLLPYCFVASQVYRTN-NA 124 +F+ G+ H L IS L+ Y ++ A Sbjct: 67 ILFLNSGAIHSGIPVDCTYECLVFDISSLLQQNSLVNTELNALIHYKKKIQLLFDKKLGA 126 Query: 125 FLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRH---YREEQVIDDVPQWLKSTVEK- 180 + + + ++ G + + +Y + + Y +E+ + + S ++K Sbjct: 127 VYDILNQMFEIMKDKKNGYQLRIYGNLYYFLGLVEEKNLYIKEKEFSAINKKSLSRIKKV 186 Query: 181 --MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTN 238 + + +LE+M +++Y + + KTPM+ +N RI A ++++ + Sbjct: 187 LFFIETKYMENISLEDMAKTIKMNEKYFCKFFKEITKKTPMEYLNHYRIECACEKIKFFD 246 Query: 239 YSVTDIAFEAGYSSPSLFIKTFKKLT-SFTPKSYRK 273 S+TD+A++ G++ S F K FKK TP+ Y K Sbjct: 247 SSITDVAYDCGFNDTSYFTKVFKKYNSGMTPREYSK 282 >UniRef50_C1I9Z9 AraC family transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I9Z9_9CLOT Length = 284 Score = 160 bits (406), Expect = 3e-38, Method: Composition-based stats. Identities = 51/252 (20%), Positives = 104/252 (41%), Gaps = 16/252 (6%) Query: 37 SGLHQH-DYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG-ATRILNV 94 + H H D+ E + + +G I G++ L++G + G +HQ +E R L++ Sbjct: 32 TNYHCHEDFIELSFITSGSVDYLIEGEKYTLKKGQVLISNPGVYHQELFEANTNCRELHI 91 Query: 95 GISK----RFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMV 150 G++ ++ Y+ + + Y+ + + +E V +T +V Sbjct: 92 GLTNLNLFSNVKKDYIDIGNKNVLTFTKYK-DEILKSCLEIVEEQKTYNQTSPFMLKSLV 150 Query: 151 TFYVINRLRHYREEQVIDDVPQW---------LKSTVEKMHDKEQFSESALENMVALSAK 201 ++ R EE D ++ L ++ K + + +L + Sbjct: 151 MKLLVLLYREINEEDTTRDSKEFSFKSREKKALVESITKYLTENYTEDISLYTLSKNMYL 210 Query: 202 SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFK 261 S Y+++ + G +P+ + +IR++ AK+ L+ + S+ IA GYS P F K +K Sbjct: 211 SPVYISKIFKELMGDSPINYLIQIRLSKAKELLDDSKLSIKSIAKMVGYSDPYYFSKLYK 270 Query: 262 KLTSFTPKSYRK 273 K +P R Sbjct: 271 KYYGVSPNKSRN 282 >UniRef50_UPI0001C3766F two-component response regulator n=2 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C3766F Length = 286 Score = 160 bits (406), Expect = 4e-38, Method: Composition-based stats. Identities = 49/283 (17%), Positives = 107/283 (37%), Gaps = 13/283 (4%) Query: 7 NAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLL 66 ++ E + + F + N H H+ E + L + G L Sbjct: 1 MIKNLSGVYETVEYENQRFVMLYDNDEIEEYPTHWHNAVEVIIPLHNGFTVVSGGVEYHL 60 Query: 67 ERGDFVFIPLGSHHQSFYEFGATRIL---NVGISKRFFEQHYLPLLPYCFVASQVYRTNN 123 + + IP G H + G I N IS+ + LP+ + Sbjct: 61 SEKEIIVIPPGELHSMPAQDGRRIIFQCDNSVISEVPSLESILPVFSSAVHITPSLNKEL 120 Query: 124 AFLT--YVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVE-- 179 L + + + + + + M ++ +R ++ ++ +++ E Sbjct: 121 YVLARKNILDIYTEYYSKAPMADVRIYMYLITILTAIREFQLNSADENSASAAENSDESR 180 Query: 180 ------KMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQ 233 K ++ E LE + +++ S+ + +R ++Y + +Q IN RI A++ Sbjct: 181 KFGLVTKYINQNYMYELPLEKLASIAGYSKYHFSRIFKKYNNMSYIQYINSKRIKAAERL 240 Query: 234 LEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 + ++ +T++A + G+SS + F + F+K TP +RK Sbjct: 241 MADSSLPITEVAMQCGFSSLTTFNRAFRKAKGCTPTEFRKLFK 283 >UniRef50_A4CQ66 Activator protein MtlR n=10 Tax=Bacteroidetes RepID=A4CQ66_9FLAO Length = 292 Score = 160 bits (406), Expect = 4e-38, Method: Composition-based stats. Identities = 56/290 (19%), Positives = 102/290 (35%), Gaps = 14/290 (4%) Query: 5 VINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRV 64 ++ A E + F K H H E V G ++I Sbjct: 3 MLKLKPAFEAIEPDFGQSFTYQKFDALKPNKNLVWHYHPEIELVYVNGGNGKRQIGSHVS 62 Query: 65 LLERGDFVFIPLGSHHQSFYE--FGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTN 122 +GD + I H F + G T V + F + + + + Sbjct: 63 YYTQGDLILIGSNLPHCGFTDACTGNTSESVVQMKTDFLGSDFFSIPEMRNIRQLFEKAK 122 Query: 123 NAFL---TYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVID--------DVP 171 + + + + + E + + ++N L E Q+++ Sbjct: 123 GGIAFTGSAKKKIGEKIEILEYKSDFQRLLAILNILNELGSTSEYQILNAEHLSVETQSK 182 Query: 172 QWLKSTVEKMHDKEQFSE-SALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFA 230 + + KE + E +LE M L+ + R ++ KT +Q +NE R+ A Sbjct: 183 ENERINSIFNFVKENYREPISLEEMADLTHMTVPSFCRYFKKVTNKTFVQFVNEYRMVHA 242 Query: 231 KKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 L S+T+I FE+G+++ S F K+FK T +P YR +L + Sbjct: 243 SNLLSENEMSITEICFESGFNNFSHFNKSFKAFTGMSPSEYRNQLKSVMR 292 >UniRef50_C7GHF4 Transcriptional regulator, AraC family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GHF4_9FIRM Length = 291 Score = 160 bits (405), Expect = 5e-38, Method: Composition-based stats. Identities = 60/289 (20%), Positives = 108/289 (37%), Gaps = 25/289 (8%) Query: 12 ATAREQQLFNGKNFHVFIYNKTESISG--LHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 REQ L +F + T H HD+ E +L+G +I + + G Sbjct: 3 CDNREQLLDQLNPTFLFTWKGTRLKDEARYHSHDFIEMAFILSGHGKYKIADRLYDVSEG 62 Query: 70 DFVFIPLGSHHQSFY---EFGATRILNVGISKRF--FEQHYLPL-----LPYCFVASQVY 119 D + + G HQ+ AT RF F ++YLPL S + Sbjct: 63 DIIILNPGQKHQALCTDPSNPATEFFVGLCDVRFGDFPENYLPLHLKDLTSDPATQSPIL 122 Query: 120 RTNNAFLTYVETVISSLNL-----RETGLEEFVEMVTFYVINRLRHYREEQVIDD----- 169 T+ + + +++++ R + +I LR E I+ Sbjct: 123 HTSGELRQKLFKICTAMSVENDVCRSGRYIMLKSYLMQMLILLLREQSEPVKINTGCSFE 182 Query: 170 --VPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRI 227 +++ + + + +L+ + S Y++R + G TP++ + IR+ Sbjct: 183 STSKKYVVDQIVNYFEDHYSEKISLDQIAENMYLSPFYISRIFKSETGDTPIRHLINIRL 242 Query: 228 NFAKKQLEMT-NYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 AK+ LE + S+ ++A + GY F K FKK P R+ L Sbjct: 243 EKAKELLENGFDGSIQEVAAKVGYDDVYHFSKLFKKRFGMPPSKIRRLL 291 >UniRef50_A8RTE5 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8RTE5_9CLOT Length = 310 Score = 160 bits (405), Expect = 5e-38, Method: Composition-based stats. Identities = 56/273 (20%), Positives = 102/273 (37%), Gaps = 12/273 (4%) Query: 15 REQQLFNGKNFH----VFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 R + + + +F H H E LVL G IN ++ L+ D Sbjct: 4 RYETVIPNDDLPFRMFIFEGRDGNYRVSKHWHQSVELFLVLEGTLDFFINSRQYTLKPND 63 Query: 71 FVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVE 130 FV + H S + + I + FE + F A + + V Sbjct: 64 FVIVNPNEIH-SIECPDPNITIVLQIPMKSFEGYMSDESRITF-ADKDESQKARLVALVT 121 Query: 131 TVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM-----HDKE 185 + + E G V+ + + + ID V K ++K+ + KE Sbjct: 122 AMYRTYEKGEFGYRLKVKSQFMEFLYLIVTEFRIEQIDKVRVQQKRHLDKLSQVTQYMKE 181 Query: 186 QF-SESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDI 244 + E +LE + + + YL+ + Y + ++R+ +A ++L ++ V DI Sbjct: 182 NYDKELSLEMVASRFGFTPSYLSHMFREYAQTGYRTYLMDLRVKYAMRELLNSDRYVGDI 241 Query: 245 AFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 A + G++ F K FKK P YRK++ + Sbjct: 242 ALDHGFADARAFAKAFKKRYGCLPSQYRKQMNQ 274 >UniRef50_B0MEI4 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MEI4_9FIRM Length = 299 Score = 160 bits (405), Expect = 5e-38, Method: Composition-based stats. Identities = 59/273 (21%), Positives = 107/273 (39%), Gaps = 16/273 (5%) Query: 16 EQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIP 75 E + K ++ ++ + +H H +YEF +V G +N + +GD VFI Sbjct: 10 EHTFLDEKTGLLYRNSRFRQTASIHTHTFYEFFIVAEGSALHLVNDSIQTITQGDLVFIR 69 Query: 76 L-GSHHQSFYEFGATRILNVGISKRFFEQHYL-------------PLLPYCFVASQVYRT 121 +H FY RI+N+G S++ + L LP C + R Sbjct: 70 PKDTHSYQFYYSDDFRIINIGFSEQLLQNIRLFLDHTAMLRTLTESELPPCVRLDKSGRE 129 Query: 122 NNAFL-TYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEK 180 + + ++ + +++T + + + EE P W + + + Sbjct: 130 EISVRFEEIGALMDTPKIQKTVFYAKCCLADVFTRYFFSYDTEEFPTASCPSWFQPMLNE 189 Query: 181 MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYS 240 M + M+ LS+ S +L R + TP + IN R+ ++ L T+ Sbjct: 190 MQKFDNLR-IGFPKMIELSSCSSNHLCRVFKSVMSVTPTEYINSKRLEYSVYLLTQTSKE 248 Query: 241 VTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 + +I+ G+SS S F FKK P +RK Sbjct: 249 IIEISMLCGFSSLSHFYHLFKKKYQCPPSRFRK 281 >UniRef50_B6VVW1 Putative uncharacterized protein n=2 Tax=Bacteroidales RepID=B6VVW1_9BACE Length = 288 Score = 160 bits (405), Expect = 5e-38, Method: Composition-based stats. Identities = 54/273 (19%), Positives = 99/273 (36%), Gaps = 24/273 (8%) Query: 27 VFIYNKTES--ISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFY 84 FI +TE + LH+HD +E V+ G+ + E GD IP H+ Y Sbjct: 19 FFIDQRTEPSLEAKLHRHDAWELYYVVHGQGNRMAGDTLQHFEAGDVALIPPSMLHRWEY 78 Query: 85 ------EFGATRILNVGISKRFFEQH------YLPLLPYCFVASQVYRTNNAFLTYVETV 132 E G R L V E+ L + + + + Sbjct: 79 AADSADEDGCVRYLMVAFKHSLVERSMEVFPELRNRLADVMFPTDALKFGPESVRVIRKT 138 Query: 133 ISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHD------KEQ 186 +S +N G++E + + + + + + P ++ V +M K Sbjct: 139 LSEMN----GMDELGRLSAMFRLLPVIFTSSDHIFAGKPMRIEKNVRRMQQICAYVMKHY 194 Query: 187 FSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAF 246 AL+++ A ++ +R G T Q + + R+N A L+ + V++I + Sbjct: 195 VHSIALDDIAAEVGMNRSAFCSYFKRCKGMTFSQFVTQYRLNTACDLLKHSQKGVSEICY 254 Query: 247 EAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFN 279 G++ F++ F P YRK+ N Sbjct: 255 LVGFNDLPHFVRVFTSTMGMPPSKYRKQFKAGN 287 >UniRef50_B1R1K3 Transcriptional regulator, AraC family n=2 Tax=Clostridium butyricum RepID=B1R1K3_CLOBU Length = 285 Score = 160 bits (405), Expect = 5e-38, Method: Composition-based stats. Identities = 54/246 (21%), Positives = 111/246 (45%), Gaps = 10/246 (4%) Query: 38 GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSF-YEFGATRILNVGI 96 LH H+ EF LVL G +IN K + ++RG+ F+ G H+++ + + + + + Sbjct: 31 PLHWHNNLEFVLVLCGEIKGKINNKYIDVKRGEIFFVNSGELHETWANDKNKIKAITILL 90 Query: 97 SKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVIN 156 S ++++ + Y F + + + +E E + +V + N Sbjct: 91 SYELLKKYFPNIDSYYFDFEEKEDSKGKIKDLIVKCGEIYTNKENFYELNMSIVLMELCN 150 Query: 157 RL-RHYREEQVIDDVPQW-------LKSTVEKMHDKEQFSESALENMVALSAKSQEYLTR 208 L + +E+ + ++ +K + M + + +L ++ + Y +R Sbjct: 151 ILFKECLKEKEVGNIYNIEEKREVNIKRAITYMEENYDL-DLSLSDISREIGMAPTYFSR 209 Query: 209 ATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTP 268 ++ G+T +N+IR+ + K+L T S+T+IA G+S+ FI+ FKK + TP Sbjct: 210 FFKKNTGETFYSYLNKIRLYHSYKELINTEASITEIALNNGFSNVKSFIEIFKKAYNNTP 269 Query: 269 KSYRKK 274 YR + Sbjct: 270 AKYRNE 275 >UniRef50_C6J998 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J998_9FIRM Length = 311 Score = 160 bits (405), Expect = 5e-38, Method: Composition-based stats. Identities = 61/281 (21%), Positives = 114/281 (40%), Gaps = 28/281 (9%) Query: 16 EQQLFNGKNFHVFIYNKTES-----ISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 E + ++ Y H H +EF V +G I K+++L G+ Sbjct: 18 EIKQHGSSDYPFQYYYDNLELFDFHCIEWHWHREFEFLYVESGEVTCGIGEKQIILSEGE 77 Query: 71 FVFIPLGSHHQSFYEFGATRILNVGISKRF--------FEQHYLPLLPYCFVASQVYRTN 122 +FI H+ FY I N F ++++ LP++ + Q ++T+ Sbjct: 78 AIFINSKILHR-FYAPSGGIIPNFVCMPEFIAPENSLIYKKYILPIISSN-IYFQRFQTD 135 Query: 123 NAFLT-YVETVISSLNLRETGLEEFVEM----------VTFYVINRLRHYREEQVIDDVP 171 + T ++T+I + ++ G E+ E+ +TFY +L + Q +D+V Sbjct: 136 ELWQTKIIQTMIKIMEIQ--GNEKIRELATLALMQDLWLTFYENVKLSDKGDVQTVDEVA 193 Query: 172 QWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAK 231 Q + + + +L+ + + S+ R+ TP+ + R+ A Sbjct: 194 QKRVQLIMQYIHENYNHNLSLDEIASHIGISKSTALNLFHRFLHTTPVNYLIGYRLQAAS 253 Query: 232 KQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 L+ TN V IA+E+G+ + F + FKK TP YR Sbjct: 254 WLLKNTNKKVKTIAYESGFHNVDYFCRLFKKRYHLTPSEYR 294 >UniRef50_C0EHT5 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EHT5_9CLOT Length = 318 Score = 160 bits (405), Expect = 5e-38, Method: Composition-based stats. Identities = 52/269 (19%), Positives = 110/269 (40%), Gaps = 24/269 (8%) Query: 28 FIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG 87 + + + + LHQHD++E V G I+ K+V L +GD I + H + Sbjct: 47 VLPHNSHGNTPLHQHDFFEMVYVHEGYCDNMIDNKKVSLTKGDICLINTYAVHTLLCDDP 106 Query: 88 ATR-ILNVGISKRFFEQHYLPLLPYC-------FVASQVYRTNNAFLTYVET-------- 131 I N+ I + LL Y F + + R ++ +L + ++ Sbjct: 107 DNAVIFNIMIGAEMMNAAHFRLLSYNDFVADFFFHSLEKQRDDDNYLIFHQSEKENAANN 166 Query: 132 ----VISSLNLRETGL---EEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDK 184 +I+ E L + + + +I R Y++ + + + ++ Sbjct: 167 LCVQLINEYYGHEEDLYQESKILHLFDCILIELTRSYQKMKDHPLGKKDSLKVSDMIYYI 226 Query: 185 E-QFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTD 243 E ++ L+++ ++ +R + G+T ++ ++R+ AK+ L+ + S+T+ Sbjct: 227 ENHYNSVTLKSIADYFGYHPKHFSRIIHQATGQTFTDLLLDLRMRCAKELLQNNSLSITE 286 Query: 244 IAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 I + GY + F F+K +PK YR Sbjct: 287 IMHQVGYHNYKWFSNQFQKKFDMSPKKYR 315 >UniRef50_C4G7L2 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G7L2_ABIDE Length = 272 Score = 160 bits (405), Expect = 6e-38, Method: Composition-based stats. Identities = 49/254 (19%), Positives = 107/254 (42%), Gaps = 9/254 (3%) Query: 25 FHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFY 84 + + + + S +H H + E LV G + L++GDF+ + + H Sbjct: 22 YITYTKYENDWPSFMHTHPFTELFLVTGGVGEFYVENNIYPLKKGDFILVNPNASHTEKS 81 Query: 85 -EFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGL 143 E + V + L L + N + Y++++++ + Sbjct: 82 DEKNPLEYIAVA-----VDNFSLNLTDTNHLMFNCISKNPNIIKYMDSMLAEQEGNKAYS 136 Query: 144 EEFVEMVTFYVINRLRHYREEQVIDDVPQWLKS---TVEKMHDKEQFSESALENMVALSA 200 + + + ++ + + + + ++K D S+ ++++ LS Sbjct: 137 DHICQNILEIILIEILRITKSDIDTEPTVNASKECFKLKKYMDSNYASKITIDDLAKLSN 196 Query: 201 KSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTF 260 ++ YL + +Y+G +P+ + IRI AK+ LE ++YS++ I+ G+SS S F + F Sbjct: 197 LNKYYLIHSFNKYFGSSPINYLCGIRIRAAKELLENSDYSISQISQSTGFSSQSYFTQCF 256 Query: 261 KKLTSFTPKSYRKK 274 K +PK+YR + Sbjct: 257 IKSCGLSPKAYRNR 270 >UniRef50_C0EDX0 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDX0_9CLOT Length = 360 Score = 160 bits (404), Expect = 6e-38, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 105/256 (41%), Gaps = 20/256 (7%) Query: 39 LHQHDYYEFTLVLTGRYFQEI-NGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGIS 97 H HD++E V G + +RV ++ + + S H + T N+ + Sbjct: 96 PHYHDFFELLYVYRGSVVNVVHRQERVTVDSKHVLLMNPNSRHLPLCDELDTIAFNIMLR 155 Query: 98 KRFFEQHYLPLL-----PYCFVASQVYRTN-----------NAFLTYVETVISSLNLRET 141 + F E+ L L+ Y F +Y N + + ++ ++I + Sbjct: 156 RSFIEETVLNLIGGNNFVYHFFLHSIYGENEMRDYLFLPVNDEIVGHIHSIIREHCEEKP 215 Query: 142 GLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKS---TVEKMHDKEQFSESALENMVAL 198 E+ + ++ ++++ + + + S T + + ++ L+++ Sbjct: 216 FYEQMLVSNLILLLGEFARIQKQETDLESERLVGSGKLTDMLRYIQLHYATVTLQSVAEH 275 Query: 199 SAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIK 258 + S YL+R ++ GK+ +I++ IR + A L+ + ++ I+ GY + F + Sbjct: 276 FSYSDAYLSRLIKKETGKSFSEIVSGIRFHTACNYLKHSTLTIEKISDIVGYQNVGNFFR 335 Query: 259 TFKKLTSFTPKSYRKK 274 FKK +P YRK+ Sbjct: 336 AFKKNCGVSPSDYRKQ 351 >UniRef50_B0MR68 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MR68_9FIRM Length = 301 Score = 160 bits (404), Expect = 6e-38, Method: Composition-based stats. Identities = 58/285 (20%), Positives = 100/285 (35%), Gaps = 24/285 (8%) Query: 12 ATAREQQLFNGKNFHVFIYNKTE-----SISGLHQHDYYEFTLVLTGRYFQEINGKRVLL 66 T RE + + Y + H H EF V G + G R +L Sbjct: 14 ETLRETASHGSEEYPFCYYYEDIWDFDFHCIDWHWHPEVEFVYVQQGMADFLVGGNRYVL 73 Query: 67 ERGDFVFIPLGSHHQSFYEFGATRILNVGISKRF--------FEQHYLPLLPYCFVASQV 118 GD +FI H+ F + I N+ S + ++ P++ Sbjct: 74 SSGDGIFINSQVIHR-FEATDSAIIPNIVFSPVLLAPQGSLIYSRYIRPIIESTTECVIF 132 Query: 119 YRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVID---------D 169 A + +ET+ S ++ +G ++ + Y + D Sbjct: 133 SAEETAHRSIIETMRSVFAVQGSGTASEMKTAELLLKLWRLLYESILITDCGSMSVHSAQ 192 Query: 170 VPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINF 229 L+ ++ +HD + L+++ S+ + + Y +P+ + E R+ Sbjct: 193 TQAKLQIMMQYIHDN-YSGQITLDDIARTVLISKSSVLNIFRTYLHTSPINYVVEYRLKC 251 Query: 230 AKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 A K L T SV IA E G+ + F + FKKL TP YR Sbjct: 252 ASKLLVDTENSVCTIAHETGFENIGYFCRRFKKLYGVTPIYYRNH 296 >UniRef50_Q0ST06 Transcriptional regulator, AraC family n=13 Tax=Clostridium RepID=Q0ST06_CLOPS Length = 686 Score = 160 bits (404), Expect = 7e-38, Method: Composition-based stats. Identities = 51/265 (19%), Positives = 104/265 (39%), Gaps = 14/265 (5%) Query: 23 KNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQS 82 + V I LH HD E VL G +I+ ++ + + H+ Sbjct: 10 SDIPVTISYVNIKNYPLHWHDAIEILYVLKGSIKVDIDTDSYEIQEDEIEIVNTEQTHR- 68 Query: 83 FYEFGATRILNVGISKRFFEQHYLPLLPYCFVAS------QVYRTNNAFLTYVETVISSL 136 Y R+L I FFE++Y + F + Q + + ++ ++ Sbjct: 69 IYSNKDNRVLIFKIDPHFFEKYYSDIENMFFYTNTSDEGAQSDESYDKLRVFLSIILCEE 128 Query: 137 NLRETGLEEFVE----MVTFYVINRLRHY---REEQVIDDVPQWLKSTVEKMHDKEQFSE 189 + ++++E + F+++N + +E +++ + K Sbjct: 129 AQKVDDYDKYIEKSLVELLFHLLNNFHYLLYDNDEIHENNMLLERYHRISKYIYNNYNKN 188 Query: 190 SALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAG 249 L+++ S YL+ + G + ++N R+ + K L T+ S+++I++E G Sbjct: 189 ITLKDIANTEFLSTHYLSHEIKYATGLSFTDLLNLTRVEESVKLLLDTDKSLSEISYEIG 248 Query: 250 YSSPSLFIKTFKKLTSFTPKSYRKK 274 +S F K FK + TP +RKK Sbjct: 249 FSHTRYFNKHFKAYYNCTPLQFRKK 273 >UniRef50_P96660 Uncharacterized HTH-type transcriptional regulator ydeC n=3 Tax=Bacillus RepID=YDEC_BACSU Length = 291 Score = 160 bits (404), Expect = 7e-38, Method: Composition-based stats. Identities = 61/281 (21%), Positives = 114/281 (40%), Gaps = 23/281 (8%) Query: 14 AREQQLFNGKNFHVFIYNKTES-----ISGLHQHDYYEFTLVLTGRYFQEINGKRVLLER 68 +E V Y T + LH HD +F L+L G +IN +++ + Sbjct: 10 LKELTEHRTVELPVACYKTTINQNINGYIPLHWHDEIQFVLILKGIALFQINEEKIEVHE 69 Query: 69 GDFVFIPLGSHHQSFYEFGATRIL-------NVGISKRFFEQHYLPL-----LPYCFVAS 116 GD +FI G H + + G+ + +S+ + + P LPY F+A Sbjct: 70 GDGLFINSGYLHMAEEKEGSDCTYICLNVSPHFVLSQELYSSYVQPYMFSTNLPYLFLAG 129 Query: 117 QVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDV----PQ 172 N L V+ + + + + E + M + L + D Sbjct: 130 NQQWAKN-ILDAVKKINQLIQQKTSLYEIDITMQLTLMWKNLVVNGFQLEYDQSEMIKSH 188 Query: 173 WLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKK 232 +K + +H + LE++ S+ R +R KTP++ + + RI + Sbjct: 189 RMKQMLNWIHL-HYVEKITLEDIAKAGQLSRSECCRYFKRMLNKTPLRYVMDYRIQKSLL 247 Query: 233 QLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 L+ +VT+++++ G++S S FI F++ + TP SY+K Sbjct: 248 LLQHPESNVTEVSYQVGFNSTSYFISKFQQAMNMTPLSYKK 288 >UniRef50_UPI00017894C2 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017894C2 Length = 310 Score = 159 bits (403), Expect = 8e-38, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 94/261 (36%), Gaps = 26/261 (9%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQ-SFYEFGATRILNVGISK 98 H HDY++ V G + + + + +GD IP + H S I Sbjct: 47 HCHDYFQIWYVAKGAFLHTVQQQVYEIRKGDIFVIPPFTLHSVSISPDEDIEIYGCEFMP 106 Query: 99 RFFEQHYLPLLPYCFVASQVYR-------------------TNNAFLTYVETVISSLNLR 139 F + + + T+ ++ ++ R Sbjct: 107 SFVNERFQEQPTDHAFFDVAFLEYFLRKEMNAQSQITLDSVTDVTVRNVLKDMLIEYERR 166 Query: 140 ETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM-----HDKEQFSES-ALE 193 + ++ +++ L +++ + + + E M H + E L Sbjct: 167 TPFFQISLKAKLLVLLSILARQVNGELLREGFEKSEKYREIMTRVVDHIHNHYQEDMNLN 226 Query: 194 NMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSP 253 ++ +LS S+ + + GKT + + ++RI A L+ SVTD+ + G++ Sbjct: 227 DLCSLSNLSRSTFCILFKEWTGKTFNRYLTDLRILQAMMMLKQPELSVTDVCYSTGFNEL 286 Query: 254 SLFIKTFKKLTSFTPKSYRKK 274 S F + FKK T +P +RK+ Sbjct: 287 SYFCRIFKKYTGISPTDFRKQ 307 >UniRef50_C0WDW3 Predicted protein n=2 Tax=Acidaminococcus sp. D21 RepID=C0WDW3_9FIRM Length = 311 Score = 159 bits (403), Expect = 8e-38, Method: Composition-based stats. Identities = 57/274 (20%), Positives = 103/274 (37%), Gaps = 12/274 (4%) Query: 14 AREQQLFNGKNFHVF-----IYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLER 68 A+E+ ++ + +H H + V G +NG L+R Sbjct: 27 AQEEIWYSQNEIPIAMFTQRYQPHLGDHIPIHWHQEMQLLWVYDGTLSYRVNGMEFPLDR 86 Query: 69 GDFVFIPLGSHHQSFYEFGATRILNVGISKRFF-----EQHYLPLLPYCFVASQVYRTNN 123 +FI H S + L + K F Q PL + ++ N Sbjct: 87 SQLLFINDSILHSSHPITTEVKTLCINFRKDIFPSALWNQFLRPLTENPYCTYELINLNA 146 Query: 124 AFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHD 183 L + I ++ TGL + + + + E + + + Sbjct: 147 QSLEKLGRFIHHVDD-STGLFSVTTFIMEVMEEIMETFEESGEAKNTEERVLFDGILSFI 205 Query: 184 KEQFSES-ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 K+ FSES + + + ++ LT Q+Y G P+ +N R++ A+ QL + SV+ Sbjct: 206 KDHFSESLTISQLSTAAHLNKNKLTALFQKYTGMPPIHFLNTYRLDEARTQLLKSARSVS 265 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 +I+ + GY S FI+ F+K TP YR+ + Sbjct: 266 EISEDVGYGQISHFIQQFRKRYGMTPLQYRRTYS 299 >UniRef50_C6JCM1 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCM1_9FIRM Length = 303 Score = 159 bits (403), Expect = 8e-38, Method: Composition-based stats. Identities = 52/269 (19%), Positives = 111/269 (41%), Gaps = 16/269 (5%) Query: 28 FIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG 87 ++ N + LH H+Y E G F ++ +F IP H + + G Sbjct: 22 WVQNYGNDVDYLHFHNYLEIGFCYEGDGFMAFGEAKMRFSGREFTVIPPNYAHTTNSDLG 81 Query: 88 A-TRILNVGISKRFFEQHYLP------LLPYCFVASQVYRTNNAFLTYVETVISSLNLRE 140 ++ + I F + +L + + ++ N F + ++ +N+ Sbjct: 82 TVSKWEYLFIDVEGFMKKFLNNPVKAEKMIQRIYSKALFLKENEFPSIAAKILKIMNIMR 141 Query: 141 TGLEEFVE------MVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHD---KEQFSESA 191 G E ++E I RL E +++ L + + ++ D + Sbjct: 142 EGEEFYIEESSGVLAALLVEIARLNRASPEDRVEEETGKLTNMITRVLDFVSYHYMEDIR 201 Query: 192 LENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 +E++ + S+ + R + +P++ IN +RI+ A + L+ T+ V DIA + G++ Sbjct: 202 IEDLAKICHISETHFRRVFTSHMKVSPLEYINSVRIHTACEFLQKTDIPVADIAHKCGFT 261 Query: 252 SPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 + S F + F+++ TP +RK+ + Q Sbjct: 262 TNSTFNRNFRQIMGVTPVEWRKRPENYEQ 290 >UniRef50_C6W740 Transcriptional regulator, AraC family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W740_DYAFD Length = 288 Score = 159 bits (403), Expect = 8e-38, Method: Composition-based stats. Identities = 63/274 (22%), Positives = 106/274 (38%), Gaps = 15/274 (5%) Query: 18 QLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLG 77 Q +F +F Y E + H H YE T++L + + E GD V + Sbjct: 9 QPLPESSFRIFGYEVKEFDAPWHYHPEYELTVILQSEGIRYVGNSMESFEAGDLVLLGPN 68 Query: 78 SHHQ---SFYEFGATRILNVGISKRFFEQHYLPLLPYCFV------ASQVYRTNNAFLTY 128 H + G + V F +L + + + A+Q R N Sbjct: 69 LPHCWKNTPDSVGPASSIVVQWPAEFMGSGWLNVEEFKSIRRLLQLATQGVRFNQEVSAR 128 Query: 129 VETVISSLNLRET--GLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKS---TVEKMHD 183 V +++++ + L +F+E++ + H EQ + + + Sbjct: 129 VLPMLAAMLDMQPFPRLMKFLEILELLATVKSIHLLCEQGFTHPLNYEDNQRINTVYNYI 188 Query: 184 KEQFSE-SALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 +E ++E L + L S+E +R R K +NE RIN A K L T+ V Sbjct: 189 REHYAERITLATLAGLVHMSEESFSRFFSRTMQKPLFTFLNEYRINMASKMLIETDMQVA 248 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 +I+F GY SP F + F+K TP +YR + Sbjct: 249 EISFACGYESPPFFFRQFRKFGGITPAAYRNQFR 282 >UniRef50_A8MEF5 Transcriptional regulator, AraC family n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MEF5_ALKOO Length = 854 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 48/264 (18%), Positives = 105/264 (39%), Gaps = 13/264 (4%) Query: 23 KNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQS 82 ++F + + +H H E LVL G + + LL+ D + I + Sbjct: 12 EDFPIRGSIYSIEGFKVHWHSAVEILLVLQGNVSLGVGDHKYLLKENDLILINYNEIYSI 71 Query: 83 FYEFGATRILNVGISKRFFEQHYLPLLPYCF-VASQVYRTNNA-----FLTYVETVISSL 136 +L++ I Q+ F S +Y +N Y+ V+ Sbjct: 72 TRGKEDNLLLSLQIDPVTLSQYDPNFSRLVFDCKSFMYCKDNQEKFDVVRYYMAKVVWEY 131 Query: 137 NLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLK-------STVEKMHDKEQFSE 189 + ++ G + + + L + + ++ + +K + ++ + Sbjct: 132 SKKKPGYQLRIASNIHLLAAHLVNNLTNENLNQLKSEIKDKDLARLKRILSYINENIDKK 191 Query: 190 SALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAG 249 +L+ + S YL+R + G T + IN +R++ A L +N ++T++++E+G Sbjct: 192 ISLKTIAKNEHISYFYLSRFIKDNLGVTFQEYINTLRLDKAVNLLLSSNKTITEVSYESG 251 Query: 250 YSSPSLFIKTFKKLTSFTPKSYRK 273 +++ LF K FK+ +P Y+K Sbjct: 252 FANIKLFNKLFKETFGASPLQYKK 275 >UniRef50_C9A5Y7 Putative uncharacterized protein n=3 Tax=Enterococcus casseliflavus RepID=C9A5Y7_ENTCA Length = 279 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 87/253 (34%), Gaps = 2/253 (0%) Query: 28 FIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG 87 + K LH HD + V G + I+ +++LL + + + I H + Sbjct: 28 CLQQKRGDQLPLHWHDELQIVWVEEGSFVYTIDDEQILLNKNETIIINSRVLHGAVLASE 87 Query: 88 ATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFV 147 R S F V + LT +E+ Sbjct: 88 NVRYCCFDFSSGFIADPVFKEAIEQLVHDRTRSYRRLTLTAQHQAFVQTVRLPLLIEQRF 147 Query: 148 EMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLT 207 + ++ L + + + + +H+ Q + + +A + T Sbjct: 148 TLYELFL-AALSQLMAARPASPKKETIYLMLAFVHEHYQ-EPLTVPAIAKAAAINTRTCT 205 Query: 208 RATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFT 267 ++Y TP+ + + R++ AK L T ++ I + G++ S F K F++ T Sbjct: 206 ALFRQYTTLTPINYLIDYRLSQAKNLLIETEEPISTICYHVGFNHLSYFSKRFQRKFGLT 265 Query: 268 PKSYRKKLTEFNQ 280 P YRK E ++ Sbjct: 266 PLQYRKTYREDDR 278 >UniRef50_D1N6W7 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N6W7_9BACT Length = 290 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 51/253 (20%), Positives = 104/253 (41%), Gaps = 7/253 (2%) Query: 27 VFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSF-YE 85 + T H+HD++E +L+G E+NG+R L GD V+I H+ Sbjct: 20 FKHHLPTGGEIEEHRHDFHEIFWILSGEAEHEVNGERSRLRHGDLVWIRPHDRHRVTGAS 79 Query: 86 FGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEE 145 + N+ + + + R + E++ L+ GL Sbjct: 80 RQPLQFYNLAFPAEIIGELTARYEEFRYYFGSDNR-QPIMIPLSESLFEWLDRGAAGLRN 138 Query: 146 FVE---MVTFYVINRLRHYRE--EQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSA 200 E + +++N + P WL+ ++ + + + + L+ Sbjct: 139 NPESRLALDRFLMNLVGELSTMLANPYRRCPAWLQEAAAELERQPEHLKLGSRALAVLAG 198 Query: 201 KSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTF 260 ++ E++ R +R+ G TP + +N R ++A + L ++ ++T IA++ G+ S S F F Sbjct: 199 RTPEHVARELRRFAGVTPSEAVNRARADYAARLLSGSDLTITQIAYQCGFGSLSGFFPAF 258 Query: 261 KKLTSFTPKSYRK 273 ++ TP YR+ Sbjct: 259 RRFYGETPLEYRR 271 >UniRef50_C7H3E2 Transcriptional regulator, AraC family n=4 Tax=Clostridiales RepID=C7H3E2_9FIRM Length = 306 Score = 158 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 48/240 (20%), Positives = 100/240 (41%), Gaps = 12/240 (5%) Query: 45 YEFTLVLTGRYFQEINGKRVLLERGDFVFI-PLGSHHQSFYEFGATRILNVGIS----KR 99 Y+ V +G+ +G ++ G V P +Y + + + K Sbjct: 68 YQILYVASGKAHFWFDGVEEVVTSGHMVLYQPKEIQKYVYYVEDHPEVFWIHFTGYDVKN 127 Query: 100 FFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLR 159 H +PL + F + + + +I L E G E+++ + ++ + Sbjct: 128 ILNYHGIPLDKHVFYSGTL----PDYKMLFRKIIRELQQCEYGYEDYIASLFNIILFLVS 183 Query: 160 HYREE--QVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKT 217 ++E + +P+ +++ V ++ ++ ++++ S + R ++Y + Sbjct: 184 RQQQESEKTTTSIPEEIEAAVAYFNENYN-TKVSVDDYAESLHISTNWFIRNFKQYMKIS 242 Query: 218 PMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 P Q I +R+ A+ LE T Y++ +IA GY +P F + FKK +P YRK L E Sbjct: 243 PAQYILSLRMVNAQSLLENTEYNIGEIAEIVGYDNPLYFSRVFKKEYGVSPAQYRKNLEE 302 >UniRef50_C6LH72 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LH72_9FIRM Length = 294 Score = 158 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 61/291 (20%), Positives = 111/291 (38%), Gaps = 26/291 (8%) Query: 6 INAP-EIATAREQQLF-NGKNFHVFIYNKTESISG----LHQHDYYEFTLVLTGRYFQEI 59 +N+P E++ ++L N F ++I S G H H EF ++ G I Sbjct: 1 MNSPLEVSADFSERLHYNLAGFPLYIKKDKLSRYGYEALCHWHPDLEFIYIIDGAMDYFI 60 Query: 60 NGKRVLLERGDFVFIPLGSHHQSFY-EFGATRILNVGISKRFFEQHYLPLLPYCFVASQV 118 NG R+ + +G +F+ H F + + + + F + A Q Sbjct: 61 NGNRIPIRQGQVIFVNSRRLHYGFSRQKEECTFIALVVHPSLFTNSF---DKAWIFAEQK 117 Query: 119 YRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVI----------- 167 + N +++ IS G++ + N LR E I Sbjct: 118 FGFANVDYILLDSHISWQKKMIEGIDRIYREINAASFNPLRLLAEAISICADAGEHIETM 177 Query: 168 -----DDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQII 222 +V Q + + + L+ + A + + ++Y +P+ + Sbjct: 178 ESSGKHNVTQMAFLNMTEYIQNNYREKLTLDKIAGAGAVCRSKSCQLFRQYVRMSPVAYL 237 Query: 223 NEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 + R++ + + L T SV++IA G+ SPS +I FKK T TP +YRK Sbjct: 238 TKYRLSKSAELLRDTELSVSEIASLCGFQSPSYYINLFKKETGQTPLNYRK 288 >UniRef50_C6CV13 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CV13_PAESJ Length = 285 Score = 158 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 51/284 (17%), Positives = 101/284 (35%), Gaps = 21/284 (7%) Query: 8 APEIATAREQQLFNGKNFHVFIYNKTESISGL----HQHDYYEFTLVLTGRYFQEINGKR 63 I T + F + I +++E +S L H H E + G + ING R Sbjct: 1 MKPIPTVTRDLIELPPAFPIVI-SQSEGVSPLFQRLHWHTALEINYISRGSGYYLINGTR 59 Query: 64 VLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFF--EQHY-----LPLLPYCFVAS 116 GD + I H++F G + + +F EQ Y +P Sbjct: 60 YDFREGDILLINSNDLHRAFENEGLVMTI-IMFDPAYFALEQRYDTELLIPFREIGMRFD 118 Query: 117 QVYRTNNAFLTY----VETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQ 172 + + L +E + RE E + + + Y ++ + Sbjct: 119 NMLDRGHPILPRLGAAIEEMRCEFAGREPHYEAVIRSQLVQFMAFVNRYFAKEQERRSSR 178 Query: 173 WLKSTVEKM----HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRIN 228 + ++ + + L+ + A + S + + G +PM + ++R++ Sbjct: 179 IRGMEIVRLTLNTIEADIAYPWTLKELAAAAHLSPSRFSALFVQTVGTSPMDYLIQLRLS 238 Query: 229 FAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 A LE ++ + ++A AG+ + S F + FK+ P R Sbjct: 239 AAVSLLESSDKKIIEVAESAGFRNLSNFNRLFKQHIGKQPSELR 282 >UniRef50_C6D0B3 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D0B3_PAESJ Length = 300 Score = 158 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 61/287 (21%), Positives = 112/287 (39%), Gaps = 44/287 (15%) Query: 31 NKTESISGLHQ---------HDY-------YEFTLVLTGRYFQEINGKRVLLERGDFVFI 74 + +E +H H+Y +E VL GR + G L G+ +FI Sbjct: 15 DYSELTPSVHWAQLHQTIRNHEYPLRRIYDFELLYVLDGRITAHLGGTDYSLSTGEMLFI 74 Query: 75 PLGSHHQSFYEFGATRILNVGISKRFFEQHYL---------------------PLLPYC- 112 G H + G + L +GI FF++ + LL C Sbjct: 75 SAGVPHNLNIDSG--QALFLGIHFDFFDEFDIVIDQDIIVKDDTVVVEDFCSEALLSGCR 132 Query: 113 -FVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQ--VIDD 169 F + V+ + + +ETVI L + G E + + ++ L+ R E + Sbjct: 133 PFSDNPVWTPSAELVKEMETVIKEFTLTKPGFEAVCKGLMISILINLQRSRTEAGPHLTT 192 Query: 170 VPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINF 229 + + VE + ++ + + E + L ++YL + + YG + + + IR Sbjct: 193 RRERMTPVVEWI-EQHYMEDCSNETLAKLLNIHEDYLGKQFKSVYGMSLNKYVQSIRHRE 251 Query: 230 AKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 AK+ L ++ +V ++ E GY F + F K +P+ YRK + Sbjct: 252 AKRLLRESDATVEQVSREVGYEDMHYFSRIFNKWEGLSPREYRKTVQ 298 >UniRef50_A6M2W7 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M2W7_CLOB8 Length = 283 Score = 158 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 49/277 (17%), Positives = 101/277 (36%), Gaps = 16/277 (5%) Query: 13 TAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFV 72 + E+ + + +N S + H H+ E ++ G IN L +GD + Sbjct: 3 GSFEKTVLESEFPFRLFFNDGYSNTPHHWHEDIEIIYLVEGTLKACINRDTYDLTQGDIL 62 Query: 73 FIPLGSHHQSFYEFGATRILNVGISKRFFEQH---------YLPLLPYCFVASQVYRTNN 123 I G H F E + + ++ P+ + + Sbjct: 63 IIGGGEIHCFFKEKKFSNRAVIQFRTSIYDNFLSGTKDTKIIKPMWNQSIHLTMGNEIHA 122 Query: 124 AFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDV-----PQWLKST- 177 ++ +I+ + E G + ++ + + L Y +Q + LK Sbjct: 123 LMERHINEIINEYSKAEEGYKLIIKARLYDLAGILIRYMPKQSYSSEDLSREKERLKKMD 182 Query: 178 -VEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEM 236 V + D L+++ S+ Y T+ + G T + +N RI A+ ++ Sbjct: 183 SVFQYVDTNYQERIDLDDISKSIGFSKYYFTKFFKENTGVTFLDYLNNYRIKKAEWRIIE 242 Query: 237 TNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 + ++ +IA+ G++S F + FK + TP YR+ Sbjct: 243 EDETIAEIAYNCGFNSIKTFNRLFKNIVGCTPMKYRR 279 >UniRef50_C7GHR9 Transcriptional regulator, AraC family n=2 Tax=Lachnospiraceae RepID=C7GHR9_9FIRM Length = 273 Score = 158 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 49/246 (19%), Positives = 100/246 (40%), Gaps = 6/246 (2%) Query: 38 GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLG-SHHQSFYEFGATRILNVGI 96 H H+ E V G + + ++ GDF + HH + +++ + + Sbjct: 23 PPHLHEAIEVVYVTDGDIELGVGQELYHMDEGDFAIVFPNVIHHYQVFGKKENKVIYLYL 82 Query: 97 SKRFFEQHYLPLLPYCFVAS--QVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYV 154 F +Y L Y + + + + ++ + ++ +V+M+ +V Sbjct: 83 DPTLFPSYYKELQIYSPKNPVVKKEQVHPDVVNAIKYLAGITEGNPMLIQAYVQMILAHV 142 Query: 155 INRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYY 214 + + V D + + VE + K + +LE M S+ L+R + + Sbjct: 143 FAEMPMVDKSTVGSD--DLIYNAVEYV-AKNFREKISLEKMAYDLCVSKYVLSRMFAKTF 199 Query: 215 GKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 + +N +R+N+A LE T S+T+I + G+ S F + FK TP+ YRK+ Sbjct: 200 HCNFSKYVNGVRLNYAVAALENTMDSITNICLDCGFESQRTFNRVFKDRYKITPREYRKR 259 Query: 275 LTEFNQ 280 + N+ Sbjct: 260 MEHNNR 265 >UniRef50_C6PNM8 Transcriptional regulator, AraC family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PNM8_9CLOT Length = 335 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 56/281 (19%), Positives = 117/281 (41%), Gaps = 24/281 (8%) Query: 21 NGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH 80 N ++ + +++ H HDY E V +G Q I V +++G+ + + + H Sbjct: 56 NSEDISIHKHDRFIEFKK-HSHDYLEMMFVYSGSIKQIIEDTDVEIKKGEILLMDMNVEH 114 Query: 81 QSFYEFGATRILNVGISKRFFEQHYLPLLPY----------------------CFVASQV 118 +NV I + FF ++ + CF S+ Sbjct: 115 SIKEAQENDIAINVLIKEEFFNWIFMNQIADNDLISNFIVKALYNKNKFRQFLCFETSKN 174 Query: 119 YRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTV 178 R + + + + N ET + ++ ++ ++ Y VI+ V + + Sbjct: 175 KRVWDFMINILIEYYENKNGMETAIRSYIVLIFNELLRCYNEYLPSSVINKVESNIYVEI 234 Query: 179 EKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTN 238 K DK +++ L+++ + S +Y+ + ++ G T ++ +I+++ K L+ ++ Sbjct: 235 VKYIDK-NYNDLNLKDLANYFSYSTDYMGKLIKKVTGNTLTELQKKIKLDKVKYLLKNSD 293 Query: 239 YSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFN 279 +S+ +I + GYS+ S F K FK+ TP YRK N Sbjct: 294 FSIEEIIRKVGYSNLSYFYKQFKEDVGMTPDKYRKNSITLN 334 >UniRef50_C6D193 Transcriptional regulator, AraC family n=2 Tax=Bacteria RepID=C6D193_PAESJ Length = 833 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 46/266 (17%), Positives = 88/266 (33%), Gaps = 8/266 (3%) Query: 15 REQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFI 74 + + + V ++ + H H E VL G ++ ++ L D + I Sbjct: 4 HYEFVETQDDLPVRLFVNSVKDIRFHWHKEIELIYVLQGAVTVYVDQRQYRLAEDDIIAI 63 Query: 75 PLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTN-NAFLTYVETVI 133 S H+ +L + + ++ R + + ++ Sbjct: 64 NSMSVHKLECTNLDNVLLTLQFGPELLDDEGTLFDCNSMSQTEYNRYRYDRLRRCLARMV 123 Query: 134 SSLNLRETGLEEFVEMVTFYVINRLRHYRE-------EQVIDDVPQWLKSTVEKMHDKEQ 186 N + G + +I L Y + D + + + DK Sbjct: 124 WESNKKGPGHRNYSMGSLQTLIGHLTRYFTAGTNGGPREKGKDYDYMRLNRIIQYVDKHY 183 Query: 187 FSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAF 246 + L+ + S Y + G + + IR+ A QL T+ S+T IA Sbjct: 184 NEKITLQTIADQEHLSLHYFSHFFSDKIGIPFQKYLTLIRLEKAAAQLSDTDKSMTQIAL 243 Query: 247 EAGYSSPSLFIKTFKKLTSFTPKSYR 272 + G+++ LF + FK TP SYR Sbjct: 244 DCGFANVKLFNQYFKGKYGSTPGSYR 269 >UniRef50_C3R936 Transcriptional regulator n=2 Tax=Bacteroidales RepID=C3R936_9BACE Length = 286 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 53/266 (19%), Positives = 93/266 (34%), Gaps = 14/266 (5%) Query: 25 FHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQ--- 81 F + + + LHQHD +E V+ G+ + GD V IP H+ Sbjct: 19 FFIDQQVEVNLEAKLHQHDAWELYYVVHGQGNRMAGDTLQPFTAGDVVLIPPSMIHRWEY 78 Query: 82 ---SFYEFGATRILNVGISKRFFEQ--HYLPLLPYCFVASQVYRTNNAFLTYVETVISSL 136 S E G R L V S E+ P L Q F +I + Sbjct: 79 NADSTDEEGHVRYLMVAFSHSLLERCIEVFPELRNRLSGVQFPTDALKFGLESSRIIRRI 138 Query: 137 NLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHD------KEQFSES 190 ++E + + + + + + P ++ V +M K Sbjct: 139 LSEINEMDELERLSAMFRLLPVIFTSSDYTLAGKPMRIERDVRRMQQICAYVMKHYVHSI 198 Query: 191 ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGY 250 AL+++ ++ +R G T Q + + R+N A L+ T V +I + G+ Sbjct: 199 ALDDIAEEVGMNRSAFCSYFKRCKGMTFSQFVTQYRLNTACHLLKNTQRGVAEICYMVGF 258 Query: 251 SSPSLFIKTFKKLTSFTPKSYRKKLT 276 + F++ F +P YRK+ Sbjct: 259 NDLPHFVRVFTNTMGMSPTKYRKQYK 284 >UniRef50_A6LH31 Transcriptional regulator n=5 Tax=Bacteroidales RepID=A6LH31_PARD8 Length = 293 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 61/275 (22%), Positives = 107/275 (38%), Gaps = 24/275 (8%) Query: 25 FHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQ--- 81 H ++ + I H H E + +G + + GD I H+ Sbjct: 16 IHFYVEDLPHFIVPWHYHPAIEIMYITSGTGTRFVGDHVEGYFEGDVCMIGPQLPHEWRN 75 Query: 82 ---SFYEFGATR--ILNVGISKRFFEQHYLPLLPYCFVASQVYRTNN--AFLTYVETVIS 134 F + R + + ++ FE + + L + + R+ F+ I+ Sbjct: 76 DPVYFDKSSGLRATCICLFFKRQIFEPNLIRLPEMNNIRELIERSRRGIKFVGKSRKKIA 135 Query: 135 SL---NLRETGLEEFVEMVTFYVINRLRH---------YREEQVIDDVPQWLKSTVEKMH 182 L + ETG ++++ + + E DD ++ K V K Sbjct: 136 ELISQSANETGASRVIKLIALLELMATSEEYEILASTGFTETVNSDDFERFNK--VYKYL 193 Query: 183 DKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 K S LE + AL + R ++ KT ++ +N++RI AKK L N ++ Sbjct: 194 VKNFTSPVKLEEVAALVGLTPTAFCRYFKKRTKKTFVEYLNDMRIGHAKKLLIEGNLKIS 253 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 I+ EAG+++ S FI FKK T+ P Y+KK E Sbjct: 254 TISSEAGFNNLSNFIGQFKKTTNMLPSEYQKKYKE 288 >UniRef50_C9Y4M3 HTH-type transcriptional activator rhaS n=2 Tax=Cronobacter RepID=C9Y4M3_CROTZ Length = 289 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 61/290 (21%), Positives = 106/290 (36%), Gaps = 11/290 (3%) Query: 1 MMQPVINA-PEIATAREQQLFNGKNFHVFIYNK-TESISGLHQHDYYEFTLVLTGRYFQE 58 M Q + NA + + F V I + ++ H HD++E +V G Sbjct: 1 MRQVLQNAGAMMTVLQGIDFFPSGAASVTIEPRLPQAAFPEHHHDFWEIVIVEHGTGTHV 60 Query: 59 INGKRVLLERGDFVFIPLGSHH--QSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVAS 116 NG+ L G F+ H + T +L F LLP Sbjct: 61 FNGQPYTLSGGSVCFVRDHDRHLYEHTENLCLTNVLYRSPQAFSFLSGLEKLLPQEQDGH 120 Query: 117 --QVYRTNNAFLTYVETVISSLNLRETGLE----EFVEMVTFYVINRLRHYREEQVIDDV 170 +R + L ++ L + +EM+ ++ LR + Q Sbjct: 121 YPSHWRVSQQTLHQASPLVERLEALRECSDVHAVASMEMLFMQLLILLRSGSQMQGGGHA 180 Query: 171 PQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFA 230 + L + + D E E + S L R ++ G TP + +N +R+ A Sbjct: 181 DERLNQLIAWLED-HYAEEVCWEQLADKHMLSLRTLHRQLKQRTGLTPQRYLNRLRLMKA 239 Query: 231 KKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 + L + SVTDIA++ G+ + F F++ S++P+ R+ E Q Sbjct: 240 RYLLRHSEESVTDIAYQCGFGDSNHFSTLFRREFSWSPRDIRQGRDEQMQ 289 >UniRef50_B0P341 Putative uncharacterized protein n=9 Tax=Clostridiales RepID=B0P341_9CLOT Length = 282 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 56/258 (21%), Positives = 103/258 (39%), Gaps = 10/258 (3%) Query: 25 FHVFIYN--KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQS 82 F +F++ I H H E V G +N + LLE GDF+ + H S Sbjct: 17 FKMFLFEGRDGNYIREKHWHRSIEIFAVFQGTLGFYLNDQEYLLECGDFIIVNSNEVH-S 75 Query: 83 FYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETG 142 + + + + FE++Y CF A + + + + + + + G Sbjct: 76 IHAPKENMTVVLQMPLNMFEKYYTGDQFICF-AHAPQAQDEQLMEMICEMYMAYSDKHCG 134 Query: 143 LEEFVEMVTFYVINRL-RHYREEQVIDDVPQWLK-----STVEKMHDKEQFSESALENMV 196 + ++ + + ++ + YRE V D+ K S + + E +L + Sbjct: 135 YDLKIQSLFYDMLYLMVTRYREINVHPDILHQHKQLTKLSVITDYMKEHYKEELSLSKLA 194 Query: 197 ALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLF 256 + S YL+R Q+Y G + IR +QL T+ +++DI+ E G+ + F Sbjct: 195 EIFGYSPSYLSRMFQKYAGINYKDYMQAIRTEHGYRQLVETDMTISDISMENGFPNNKAF 254 Query: 257 IKTFKKLTSFTPKSYRKK 274 K F K P +RK+ Sbjct: 255 SKAFYKKYGIMPAEFRKR 272 >UniRef50_UPI0001C3660E AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C3660E Length = 334 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 54/276 (19%), Positives = 109/276 (39%), Gaps = 22/276 (7%) Query: 19 LFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGS 78 L +GK + + + H+H+Y E + G I+G+ V+L G+ +F+ + Sbjct: 57 LEHGKLIRIRPHTRFVHFPK-HKHNYIEVIYMCKGETTHVIDGETVVLRTGELLFLNQHA 115 Query: 79 HHQSFYEFGATRILNVGISKRFFEQHY----------LPLLPYCFVASQVYRTNNAF--- 125 + +N I FF+ + L C Y + F Sbjct: 116 TQEILPAGEGDVAVNFIILPEFFDTAFEMMGEEENLLRDFLVGCLCNDTRYASFLHFKVA 175 Query: 126 -----LTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEK 180 VE ++ +L + ++ + +L HY + ++ + + + + Sbjct: 176 DVLPVQNLVENMVWTLLNDQPNKRSINQITMGLLFLQLMHYTD-KISHTSEGFDQRLIFQ 234 Query: 181 M--HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTN 238 + + E + + L + ++ +L+R +R G+T +++ R+N A L T Sbjct: 235 VLGYIDENYRDGELTELSSMLGYDIYWLSRMVKRLTGRTYKELLQIKRLNQAAFLLLNTR 294 Query: 239 YSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 +V D+A GY + S F + FK+ +PK YRK Sbjct: 295 LAVADVALAVGYDNTSYFYRIFKERYQMSPKEYRKN 330 >UniRef50_UPI0001789626 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789626 Length = 305 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 62/285 (21%), Positives = 108/285 (37%), Gaps = 34/285 (11%) Query: 8 APEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEIN----GKR 63 P +Q N HQHD E +++G ++ K Sbjct: 16 VPRFYAYYYKQWMN-------------YEMPYHQHDSTEIMYMISGVCRIDVKAGDTEKS 62 Query: 64 VLLERGDFVFIPLGSHHQSFYEFG-ATRILNVGI----------SKRFF--EQHYLPLLP 110 V+L++G+F+ + G H+ + + R+LNV S R E+ + L Sbjct: 63 VILKKGEFMVLDAGVPHRLIVDQAASCRMLNVEFGFMESEGMAPSLRHIVGEEEEVSFLL 122 Query: 111 YCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYV---INRLRHYREEQVI 167 V +++++ L+ R T + + I RL RE + Sbjct: 123 KRPFRYLVLADQEEVYPVLKSLVLELDQRGTDGRMMTHALFIQLLVCIARLYEERERSDM 182 Query: 168 DDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRI 227 ++K +V+ +H + ++++ A YL R +R G+T + + IR+ Sbjct: 183 QQSDFYIKRSVDYLHQNYD-RQIQVKDVAAEVNLHPGYLHRVFRRGTGRTITEYLTTIRM 241 Query: 228 NFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 AK LE T+ + +I+ G S F FKK T TP YR Sbjct: 242 EKAKMLLEQTDIPIHEISDYVGVGSRQYFHMLFKKYTGSTPVEYR 286 >UniRef50_C0EIE9 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIE9_9CLOT Length = 361 Score = 158 bits (399), Expect = 2e-37, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 99/262 (37%), Gaps = 19/262 (7%) Query: 32 KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRI 91 K+ LH H+++E V +G +G+ L +G H + T + Sbjct: 87 KSHFKEYLHSHEFFELFYVYSGTCHCYFDGREFRLPKGTIWIFNTQCAHNVYLPDDRTNL 146 Query: 92 LNVGISKRFFEQHYLPLLPYC-----FVASQVYRTNNAFLT-------------YVETVI 133 +N+ + K F L ++ F + +Y +++A Y+ +I Sbjct: 147 VNILLRKSTFSAALLGMINDNDLFLSFFLNSIYNSDSAPKQLQFTTEPGGMSEFYIFKII 206 Query: 134 SSLNLRETGLEEFVEMVTFYVINRL-RHYREEQVIDDVPQWLKSTVEKMHDKEQFSESAL 192 + + ++ + ++ L R YRE L + + + + + L Sbjct: 207 EEYAGKSPYSQSIMKHLFCCLLAELTRQYRERADNRGRESGLHISQVISYISDNYRIATL 266 Query: 193 ENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSS 252 ++ + YL++ ++ +T + + ++ A L T + +A GYS Sbjct: 267 QSTAEHFHYNPSYLSKYMLKHTNQTFSEYLTRFKLEKAAHLLTSTALPLERVASLTGYSE 326 Query: 253 PSLFIKTFKKLTSFTPKSYRKK 274 S F K FKK + TP+ YR + Sbjct: 327 RSAFDKAFKKFSGLTPRQYRSQ 348 >UniRef50_Q0SZ95 HTH-type transcriptional activator rhaS n=93 Tax=Enterobacteriaceae RepID=RHAS_SHIF8 Length = 278 Score = 157 bits (398), Expect = 3e-37, Method: Composition-based stats. Identities = 56/279 (20%), Positives = 110/279 (39%), Gaps = 10/279 (3%) Query: 11 IATAREQQLFNGKNFHVFIYNK-TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 + F N V I + ++ H HD++E +V G NG+ + G Sbjct: 1 MTVLHSVDFFPSCNASVAIEPRLPQADFPEHHHDFHEIVIVEHGTGIHVFNGQPYTITGG 60 Query: 70 DFVFIPLGSHH--QSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVA--SQVYRTNNAF 125 F+ H + T +L + F LLP +R N++ Sbjct: 61 TVCFVRDHDRHLYEHTDNLCLTNVLYRSPDRFQFLAGLNQLLPQELDGQYPSHWRVNHSV 120 Query: 126 LTYVETVISSLNLRETGLE----EFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM 181 L V +++ + +E + E++ ++ LR ++ +++ L + + Sbjct: 121 LQQVRQLVAQMEQQEGENDLPSTASREILFMQLLLLLRKSSLQENLENSASRLNLLLAWL 180 Query: 182 HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSV 241 D E + + + S L R ++ G TP + +N +R+ A+ L + SV Sbjct: 181 ED-HFADEVNWDAVADQFSLSLRTLHRQLKQQTGLTPQRYLNRLRLMKARHLLRHSEASV 239 Query: 242 TDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 TDIA+ G+S + F F++ +++P+ R+ F Q Sbjct: 240 TDIAYRCGFSDSNHFSTLFRREFNWSPRDIRQGRDGFLQ 278 >UniRef50_C0EBM6 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBM6_9CLOT Length = 383 Score = 157 bits (398), Expect = 3e-37, Method: Composition-based stats. Identities = 51/265 (19%), Positives = 103/265 (38%), Gaps = 24/265 (9%) Query: 32 KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRI 91 +T +GLH H+Y+ T V G + G+ ++GD F+ H+ + Sbjct: 108 RTHFETGLHTHEYFVITYVFRGECYCYFGGEEFHFKQGDIWFLNTQVSHKLLLPGDDCVV 167 Query: 92 LNVGISKRFFEQHYLPLLPYC-----FVASQVYRTNNA-------------FLTYVETVI 133 ++ + + F L + F + ++ +N Y+ ++ Sbjct: 168 FHICLRQTSFCSVLLDKIKNNEQFVHFFVNSIFDEDNNPCLMQFHIRELSVAQYYLFKML 227 Query: 134 SSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDD------VPQWLKSTVEKMHDKEQF 187 ++ +E + + ++ +L E + ++ + L + + E Sbjct: 228 EEYYDQKMHSQEVIAYLFCCLLIQLERNCEAEAVEQEAHRNGRQKNLDISEVIAYLMEHQ 287 Query: 188 SESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFE 247 L+ + YL+R QR+ GKT ++ +N IR+ A + L T + I+ Sbjct: 288 QTVTLQQAASHFHYVPAYLSRFIQRHTGKTFLEFLNGIRLERAAEMLRNTTLPIRQISHM 347 Query: 248 AGYSSPSLFIKTFKKLTSFTPKSYR 272 GYS S F ++FK+ TP+ YR Sbjct: 348 VGYSDRSSFDRSFKRQYHMTPRKYR 372 >UniRef50_C0EIK7 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIK7_9CLOT Length = 343 Score = 157 bits (398), Expect = 3e-37, Method: Composition-based stats. Identities = 42/275 (15%), Positives = 102/275 (37%), Gaps = 23/275 (8%) Query: 25 FHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFY 84 H + Y S H HD++E + V G+++ + + + + V + + H + Sbjct: 62 LHDYRYVHFGPPSHPHNHDFFEMSYVYKGQFYNRVENQDIEQKENTLVLLSPRAVHSCYI 121 Query: 85 EFGATRILNVGISKRFFEQHYLPLLP-----YCFVASQVY-----------RTNNAFLTY 128 + N+ I + E+ +L + F +Y N ++ Sbjct: 122 REKTDIVFNILIKRSLVEKIFLRMFSEESAVSRFFLDSIYNIHQKKPYLVFHCNEELVSL 181 Query: 129 VETVISSLNLRETGLEEFVEMVTFYVINRLRHYRE-----EQVIDDVPQWLKSTVEKMHD 183 V +I ++ + + + + L + E + + + ++ + Sbjct: 182 VHGIIREHFDQKLFSQNMIIAKLIELFSELSRLFQITLQGESPLPETSSNISEILDYI-- 239 Query: 184 KEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTD 243 + +S L ++ S Y++R + + ++ I++ ++ A + L ++ V Sbjct: 240 ENNYSSVTLTSVAEHFNYSPSYVSRIIKTHLNQSFASIVHNKKLENACRYLSASDLPVEQ 299 Query: 244 IAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEF 278 + GYS S F K FK+ +P+ YR + + Sbjct: 300 VIEIVGYSDVSHFYKIFKQKYGLSPRQYRTQSNKL 334 >UniRef50_C0EGG3 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGG3_9CLOT Length = 343 Score = 157 bits (398), Expect = 3e-37, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 105/258 (40%), Gaps = 24/258 (9%) Query: 46 EFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHY 105 E + G Q K + L++ D + + + H + + N+ ISK FEQ Sbjct: 72 ELIYMYRGGSIQFFQDKELELKQHDILILNPNTIHAPYTTQEEDCLFNILISKSLFEQSM 131 Query: 106 LPLLPYC-----FVASQVYRTNNAF----------------LTYVETVISSLNLRETGLE 144 + LL F+A +Y + A +E +I+ ++ G + Sbjct: 132 MSLLYDNHMFTGFIADCLYHVSTAVEYLYFPSGNNGMSDENSFLIEKLIAEYINKKEGYK 191 Query: 145 EFVEMVTFYV-INRLRHYREEQVIDDVPQWLKSTVEKM--HDKEQFSESALENMVALSAK 201 ++ + +N R + + + + + ++ + + +L+ + Sbjct: 192 NSMKAWLVLLFLNLSRTHSQLHPLKQGEFDNRGVIAEIISYINNNIEDVSLKGLSEQFNY 251 Query: 202 SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFK 261 S EYL+R ++ G++ ++I+ ++ AK LE ++ ++ + +G+ S + F K FK Sbjct: 252 SPEYLSRIIKQNTGQSFIEIVKRFKMEKAKYYLETSDLPISAVMNLSGFKSINYFYKVFK 311 Query: 262 KLTSFTPKSYRKKLTEFN 279 + +P +YRK N Sbjct: 312 RYNGISPSAYRKGARHAN 329 >UniRef50_C5RI71 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RI71_CLOCL Length = 300 Score = 157 bits (398), Expect = 3e-37, Method: Composition-based stats. Identities = 54/284 (19%), Positives = 104/284 (36%), Gaps = 26/284 (9%) Query: 17 QQLFNGKNFHVF-----IYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDF 71 ++ +F I N G H H EFT +L+G + N + L++ GD Sbjct: 16 REYARNNDFPFRVDYEEITNYIGYSFGCHWHPEVEFTYILSGSMIYQANNTQHLVKAGDV 75 Query: 72 VFIPLGSHHQSFYEFG-ATRILNVGISK--------RFFEQHYLPLLPYCFVASQVY--- 119 +F+ H + R + + FE Y+ + VY Sbjct: 76 IFVNQNCLHSGKASNDCSCRYFAITFNPTLISGYKSSIFENKYIGEIINSDRIPFVYFEG 135 Query: 120 --RTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQW---- 173 + N ++ + + + G E +E F + L +V D++ + Sbjct: 136 SKKENEQIVSLLMRLEELYREKAEGYELLIESKLFELWFYLYRDVYCKVPDELIKQTKNI 195 Query: 174 --LKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAK 231 +K+ ++ +HD + L+++ S+ R ++ TP + RI + Sbjct: 196 MQIKAALDYIHDNYK-ENLTLDDISEACNLSKSSCCRLFKKIVHGTPFNYLLSYRIQRSI 254 Query: 232 KQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 L ++T+ A G+SS S + + FKK TP Y+ + Sbjct: 255 PYLLSEGMNITEAALSVGFSSSSYYSEIFKKYMKCTPTEYKNNV 298 >UniRef50_C6IIU9 Transcriptional regulator n=2 Tax=Bacteroides RepID=C6IIU9_9BACE Length = 278 Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats. Identities = 57/270 (21%), Positives = 111/270 (41%), Gaps = 10/270 (3%) Query: 13 TAREQQLFNGKN--FHVFIYNKTESIS-GLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 + + F N FH+ N T S LH HDY E V G +NG + L G Sbjct: 4 SVFKLSYFLSANEKFHIARVNITSSQDLSLHSHDYAEILWVEKGTGIHHVNGHQFRLSPG 63 Query: 70 DFVFIPLGSHHQSFYEFGATRILNVGI---SKRFFEQHYLPLLPYCFVASQVYRTNNAFL 126 D + + H I+NV + +F Q Y F + ++ Sbjct: 64 DLIMVRPKDRHTFSSSGKGIVIVNVAFPVETLDYFRQRYFEWSNLYFWTTGMFPFQMRLS 123 Query: 127 TYVETVISSLNLRETGL---EEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHD 183 + +SS ++ + ++ ++ + + ++P WL + ++K + Sbjct: 124 RDIVKRLSSRAEEAMKYGRSNIQLDSLLLFIFRQITANEKVEDSSEIPVWLFNAIQKFNS 183 Query: 184 KEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTD 243 E F + + V L ++ +Y+ R + ++ K+ +INE ++ +A QL +T+ + + Sbjct: 184 PEFFIQ-GIAGFVTLCDRNIDYVNRIVKLHFHKSLTDLINEFKMQYATTQLSITSMPIKE 242 Query: 244 IAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 I G+ + F K F+ + + TP YR+ Sbjct: 243 ICTNCGFRNLGHFYKIFRSVYNQTPYEYRR 272 >UniRef50_C8P2X0 Putative uncharacterized protein n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P2X0_ERYRH Length = 273 Score = 157 bits (397), Expect = 4e-37, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 98/247 (39%), Gaps = 4/247 (1%) Query: 32 KTESISGLHQHDYYEFTLVLTGRYFQEI-NGKRVLLERGDFVFIPLGSHHQSFYE-FGAT 89 ++ S LH H + E V+ G + + ++ ++ D + I H + G Sbjct: 25 DSDWHSTLHSHPFAELMYVVRGSGYFRFADNLKLPIQADDLIIINPNVLHTECSDAEGGL 84 Query: 90 RILNVGISKRFF--EQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFV 147 + +GI F EQ+ P + + +E + + E +E + Sbjct: 85 EYIVLGIDGVEFYTEQNAHPGVSIHNYEDYKHEILFYIKAILEAGKTHDEMSELIVENLL 144 Query: 148 EMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLT 207 ++ + R + + +E + L+++ +L+ ++ YL+ Sbjct: 145 RVLVLNTMRRTTSLLDVETSTGGDNKDCIFLEHYLNLHYRENITLDHLASLTFLNKFYLS 204 Query: 208 RATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFT 267 + G +P+ + R+ AKK L T+ S+T I+ G+ SPS F + FK + + Sbjct: 205 HIFKEQTGLSPIDYLLRKRMIEAKKLLINTDLSITQISDIVGFRSPSYFSQFFKNMECMS 264 Query: 268 PKSYRKK 274 P S+R K Sbjct: 265 PSSFRNK 271 >UniRef50_B0A7K6 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7K6_9CLOT Length = 297 Score = 157 bits (397), Expect = 4e-37, Method: Composition-based stats. Identities = 51/262 (19%), Positives = 102/262 (38%), Gaps = 21/262 (8%) Query: 33 TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRIL 92 ++ LH HD + ++V G + K +L+ G +FI H + I Sbjct: 36 SKGYVKLHWHDEIQISIVTKGSVEFIVGEKSYILKNGQAIFINTQRIHMAKSVGDEDCIY 95 Query: 93 NV---------GISKRFFEQHYLP--LLPYCFVASQVYRTNN---AFLTYVETVISSLNL 138 + EQ Y+ + + ++Y NN L Y+ +I+ + Sbjct: 96 HAIMFNAKLLKMFPGSIIEQKYIDPVITSNKLNSIEIYGNNNWEQDALKYISDIINVDII 155 Query: 139 RETGLEEFVEMVTFYVINRLRHYREEQVIDDVP------QWLKSTVEKMHDKEQFSESAL 192 ++ G E + + L ++ + Q +K + +H ++ L Sbjct: 156 QDKGYELKIYIDLLNFWLLLVLNDKDIFNQKMEPKPINEQRIKDVLSFIHQN-YSNKITL 214 Query: 193 ENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSS 252 +++ S+ R ++ +P + RIN + K L+ ++ S+ DI+ G+++ Sbjct: 215 QDIADAVFVSKGECCRFFKKSLKMSPYDYLINYRINESMKLLKNSSLSILDISENVGFNN 274 Query: 253 PSLFIKTFKKLTSFTPKSYRKK 274 S +I+ FKK T TP YR Sbjct: 275 VSHYIQIFKKKTGQTPLEYRNS 296 >UniRef50_C4ZHR1 Xylan 1,4-beta-xylosidase n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZHR1_EUBR3 Length = 276 Score = 157 bits (397), Expect = 4e-37, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 99/257 (38%), Gaps = 9/257 (3%) Query: 25 FHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFY 84 + Y S H HD+ E V++G L+ +F I H Sbjct: 17 IYCDRYEDYRQFSPRHWHDHIEIIYVVSGSLQVVCGENEYTLKENEFFVINSNKIH-GTQ 75 Query: 85 EFGATRILNVGISKRFFEQHYLPL----LPYCFVASQVYRTNNAFLTYVETVISSLNLRE 140 + R+L V I + + + C+ R + ++++ + Sbjct: 76 SYERVRVLLVQIPYAYLDSYIDDYGQIRFRECYETENGSRKYEQMKSLLKSIAHIYRKKG 135 Query: 141 TGLEEFVEM---VTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSE-SALENMV 196 G E + Y++ Y+E + Q + + + + E AL+ Sbjct: 136 KGYELRLMAKVNEFLYILFTNYSYKEMNAGKESRQIARLKDVLRYVAKNYQEPIALKEAA 195 Query: 197 ALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLF 256 +++ +Q+Y R ++ G T ++ +N++RIN ++L T S+TDI G+++ +F Sbjct: 196 DIASLNQDYFCRMFKKCMGVTFLEYVNQVRINHIHEELLATEDSITDILEHNGFTNYKVF 255 Query: 257 IKTFKKLTSFTPKSYRK 273 + FK TP+ RK Sbjct: 256 SRMFKAQFGMTPRELRK 272 >UniRef50_B7MQA3 Putative AraC-type DNA-binding domain-containing protein n=12 Tax=Enterobacteriaceae RepID=B7MQA3_ECO81 Length = 289 Score = 157 bits (396), Expect = 5e-37, Method: Composition-based stats. Identities = 52/252 (20%), Positives = 89/252 (35%), Gaps = 12/252 (4%) Query: 39 LHQHD-YYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG------ATRI 91 +H H E L+ G I + + +GD V H + E G I Sbjct: 33 MHMHPQTVELILITEGDGEYFIGDRIYPVRKGDLVIYNSQVVHDEYLESGRPIGTICCGI 92 Query: 92 LNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVT 151 N+ + Y T ++ V TVI+ + + + + V Sbjct: 93 NNISCPGLRENALIPDDIVPVIPLYHHYATVEKLMSSVFTVINQHAVEGPAMAQLLTQVV 152 Query: 152 FYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQ 211 I R + L +++ D+ + L+ + S Y++ + Sbjct: 153 LKYIEGNVLLRTGNDAIQRHENLLDSIKSYIDRNFYEPIRLDTLATKFNVSPYYVSHEFK 212 Query: 212 RYYGKTPMQIINEIRINFAKKQLEMTNY----SVTDIAFEAGYSSPSLFIKTFKKLTSFT 267 R YG +PM + + R+ A+ L T+ +T IA+ G+S+ S F FK T Sbjct: 213 RRYGYSPMDYLIKRRLGEAQSLL-TTDKGGREKITSIAYRVGFSNLSHFQNYFKNKVGKT 271 Query: 268 PKSYRKKLTEFN 279 P YRK + N Sbjct: 272 PGQYRKDYRKAN 283 >UniRef50_C0EGL1 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGL1_9CLOT Length = 316 Score = 157 bits (396), Expect = 5e-37, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 105/277 (37%), Gaps = 17/277 (6%) Query: 17 QQLFNGKNFHVFIYNKTESI-SGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIP 75 ++ G++ + + + +G H HD++E V G + I+ + + V + Sbjct: 40 KKFEKGEDIRIQTHPPLPGVHTGFHYHDFFEMIYVYRGSFMHTIHDETLRQTEDQVVLLN 99 Query: 76 LGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLP-----YCFVASQVY----------- 119 LG+ H + E + N+ + K E +L + Y F V+ Sbjct: 100 LGAVHSVWVESKDDIVFNIMMKKSVVENIFLQITSKDHPIYNFFLDSVFGINKLSSFIVL 159 Query: 120 RTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVE 179 N + +I R+ + + + L P KS+ Sbjct: 160 EMNQGISLILNKIIEEYYERKVYNRSIILAYLLVLFSELARKYRSDNNLVAPDHTKSSDI 219 Query: 180 KMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNY 239 + K+ ++ LE++ + S+ ++ R + KT +I + +I ++ TN Sbjct: 220 LHYIKQNYASLTLESLADMFGYSRHHMGRLILSWTNKTFTDLITDYKIQSVCSLVQNTNL 279 Query: 240 SVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 ++ I AG+S PS F KTF+K +YR+ L Sbjct: 280 PISKIVEIAGFSDPSHFYKTFQKKMGIHFSTYRQHLN 316 >UniRef50_C0EAY1 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EAY1_9CLOT Length = 329 Score = 157 bits (396), Expect = 6e-37, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 100/279 (35%), Gaps = 24/279 (8%) Query: 22 GKNFHVFIY--NKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSH 79 G +F + I+ H HD +E V G E+ R L +GD + + Sbjct: 52 GSSFRISIHFDPPGFKHQAFHNHDCFEMIYVYQGELENEMPANRCTLHQGDILLLNPNVW 111 Query: 80 HQSFYEFGATRILNVGISKRFFEQHYLPLLPYC-----FVASQVYRTNNAFLTY------ 128 H + N+ I K F+ + +L F + +YR + Sbjct: 112 HNVYRNDEKDIAFNIAIPKELFQTYLSNILEDNQMFSFFFSDYLYRDPKSERYLYFQNSG 171 Query: 129 -------VETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEK- 180 VE ++ ++ + ++L +E+ + ++ + Sbjct: 172 DPWVREPVERMVREYFSKQPNWNSMTLACLIALFSQLSRTHQEESKIAAYENDRNRIVYE 231 Query: 181 --MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTN 238 + + L M S +L++ ++ GK Q++ E R+N A LE TN Sbjct: 232 MVAYVNAHMQDVTLNQMAEHLKYSPGHLSKLLRKS-GKNFSQLLLECRMNKAGYYLEHTN 290 Query: 239 YSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 +++I GY++ F K F++ TP YRK + Sbjct: 291 LPISEIIERIGYTNEFHFYKLFRQSFHTTPTEYRKSVRS 329 >UniRef50_B0M9M5 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0M9M5_9FIRM Length = 315 Score = 157 bits (396), Expect = 6e-37, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 100/282 (35%), Gaps = 25/282 (8%) Query: 15 REQQLFNGKNFHVF-----IYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 RE + F ++ + H H EF+++ G E + L++G Sbjct: 18 RELNQTLDQRFPIWASSDSFFRYYNRYFRCHWHPEIEFSVITEGECIYEAGDRVYELKKG 77 Query: 70 DFVFIPLGSHHQSFYEFGATRILNV--------------GISKRFFEQHYLPLLPYCFVA 115 D +FI H + + V I ++F E C Sbjct: 78 DGIFINQNVLHMAEMKGKLECRFGVVRAEAFFLGGSTESLIYRKFMEPVINNPEISCVPF 137 Query: 116 SQVYRTNNAFLTYVETVISSLNLRETGLEEFV-EMVTFYVINRLRHYREEQ----VIDDV 170 + + +I R G E + + + ++ EE+ I+ Sbjct: 138 YGDIPWQKRLMRQLAELIRIYEERPEGFELMMTSGFSLLWLEFVKALGEEKGNAVSINKD 197 Query: 171 PQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFA 230 + ++ + + + + L+++ + Q R + ++P++ +N RI + Sbjct: 198 AERIRKGISYI-QRNYTKKITLKDIAEICQSCQSECCRMFRNVVKESPIEYVNTYRIRRS 256 Query: 231 KKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 +E YS+T+IA + G+S S F + FKK TP Y+ Sbjct: 257 LILIEEGTYSMTEIAQKTGFSGSSYFTEVFKKKMGCTPSKYK 298 >UniRef50_C6D477 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D477_PAESJ Length = 305 Score = 156 bits (395), Expect = 6e-37, Method: Composition-based stats. Identities = 62/288 (21%), Positives = 106/288 (36%), Gaps = 24/288 (8%) Query: 7 NAPEIATAREQQLFNGKNFHVFIYNKTESIS-GLHQHDYYEFTLVLTGRYFQEINGKRVL 65 AP ++ E+ N F VFI E H H Y E V++G + + + Sbjct: 11 KAPAHHSSIEEHFHNQ--FPVFINRWEEGFDLREHDHAYLEIVYVMSGEGYHYVADEVNK 68 Query: 66 LERGDFVFIPLGSHHQSFYEFGATRIL--NVGISKRFFEQHYLPLLPYCFVASQVYRTNN 123 +G IP+G+ H A R+L N+ I + + + L YC ++ + Sbjct: 69 TSKGSLYIIPIGTSHIFRPNGTANRLLVYNLCIRPDWIGELGVWLSQYCRDTDVLHVLDG 128 Query: 124 AFLTYV-------------ETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQV---- 166 TY+ E + G E V ++ R+ + Q Sbjct: 129 NPGTYLFLRDTPLELAPSFEQLHREFTEESWGFETTVLAGLLQLLTRISRKLKTQDSTGD 188 Query: 167 -IDDVPQWLKSTVEKMHDKEQFSES-ALENMVALSAKSQEYLTRATQRYYGKTPMQIINE 224 + + H +E +E + + SQ + R ++ G + + Sbjct: 189 QTTGSTRHSEFVSIVEHINRHIAEPLKMEQLADQAGISQRHFIRLFRQQTGMGFSEYVQN 248 Query: 225 IRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 R+ A + L T+ SV DIA + GY P+ F + F+K+ TP YR Sbjct: 249 KRVELACQLLTGTSQSVADIAKKVGYQDPAHFREVFRKVMGITPSQYR 296 >UniRef50_C0EDG4 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDG4_9CLOT Length = 334 Score = 156 bits (395), Expect = 6e-37, Method: Composition-based stats. Identities = 49/255 (19%), Positives = 92/255 (36%), Gaps = 21/255 (8%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISK 98 LH H+ +E + G ++ GD + + H+ ++N+ I Sbjct: 73 LHNHNCFELAYMYRGSCTNYFENGCFTMKEGDILLLNPNIRHEIRTAGPHDILVNLIIEP 132 Query: 99 RFFEQHYLPLLP-----YCFVASQVYRT-------------NNAFLTYVETVISSLNLRE 140 FE L F AS +Y + + ++ + Sbjct: 133 ALFESFMSSQLSGNQLMLNFFASYIYNVGQSRDYFYFSQIKDQTAYRMLNALLLEYCEQP 192 Query: 141 TGLEEFVEMVTFYVINRLR-HYREEQVIDDVPQWLKSTVEKMHD--KEQFSESALENMVA 197 + E + +++RL Y E+ +D S + ++ +E ++ LE + Sbjct: 193 VYWQNVCESLLAILLSRLSVAYSEQIGLDPASPENSSAIIEILSFMREHCVDAKLETVAK 252 Query: 198 LSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFI 257 S ++TR +++ GKT ++++ R+ K L T+ S IA Y+ S Sbjct: 253 EFNYSPGHITRLIKQHTGKTFIEVMQNFRLEKVKHYLINTDLSAEKIARLTRYNDVSYLY 312 Query: 258 KTFKKLTSFTPKSYR 272 K FKK T YR Sbjct: 313 KLFKKKYGLTLSEYR 327 >UniRef50_C9RVZ3 Two component transcriptional regulator, AraC family n=4 Tax=Geobacillus RepID=C9RVZ3_GEOSY Length = 513 Score = 156 bits (395), Expect = 7e-37, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 74/179 (41%), Gaps = 7/179 (3%) Query: 105 YLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREE 164 Y+ L R ++ ++S L +R L F + + R + Sbjct: 333 YIEELASSHSLPAAGRKAEETFVWLGRLLSELGIRYERLASFASCRSAAELKRAALDELD 392 Query: 165 QVIDDVPQWLKSTV-------EKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKT 217 ++ D+ W + + D+ LE + + S Y ++ + ++G T Sbjct: 393 RIAADLEVWRQQQAYGKLGKAKDYIDRHYAEPLTLEEVAEQAGISPYYFSKLFKEHFGIT 452 Query: 218 PMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 + + +RI AK+ L T+ S+ +I F GY+ P+ F + FKK T +P YRKK+ Sbjct: 453 FIDYVTNVRIERAKEALAETDQSLKEICFSVGYNDPNYFSRVFKKQTGLSPSEYRKKVQ 511 >UniRef50_C5RE27 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RE27_CLOCL Length = 820 Score = 156 bits (395), Expect = 7e-37, Method: Composition-based stats. Identities = 48/267 (17%), Positives = 102/267 (38%), Gaps = 14/267 (5%) Query: 25 FHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFY 84 + I+ + H HD E VL G+ I+ LE+G+ I HQ Sbjct: 12 LPIKIFVAKLNNYPPHWHDEIEIVKVLEGKIKVSISESVCFLEKGEMAIIKHKEIHQIQS 71 Query: 85 EFGATRILNVGISKRFFEQHYLPLLPYCFVASQV-------YRTNNAFLTYVETVISSLN 137 + + + I+ +F E H+ L F + + + + +I+ L+ Sbjct: 72 LENESLLQIIQINYKFMETHFPHLSRISFENNLLNISKDINLNVASNLKQLINEMINYLS 131 Query: 138 LRETGLEEFVEMVTFYVINRLRHY-------REEQVIDDVPQWLKSTVEKMHDKEQFSES 190 +R G E V + V + +E +++ + + ++ +E Sbjct: 132 VRNQGYEFHVISAIYKVFGSIISNVPYTISTEDELEKNNITFNRMKKIIEYIEQNYMNEI 191 Query: 191 ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGY 250 + + + ++ Y+ +++ G + Q I +R+N A + L S+T+I G+ Sbjct: 192 NINTLAEILHLNKYYIAHFFKKHTGLSLGQYITNLRMNKATELLIKNEDSITNIILSCGF 251 Query: 251 SSPSLFIKTFKKLTSFTPKSYRKKLTE 277 + F K F+++ +P Y+ E Sbjct: 252 KNIKYFYKVFREVYKCSPLEYKNNRQE 278 >UniRef50_UPI0001787F16 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787F16 Length = 280 Score = 156 bits (395), Expect = 7e-37, Method: Composition-based stats. Identities = 56/275 (20%), Positives = 105/275 (38%), Gaps = 15/275 (5%) Query: 15 REQQLFNGKNFHVFIY----NKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 R Q ++ + + I N + S+ H+H Y+E +L G ++ +++GD Sbjct: 4 RLQPKYHIGDHNFSIQYMSRNGSSSMPRPHEHPYFELYYLLNGERVYFMDDNVFTVKKGD 63 Query: 71 FVFIPLGSHHQS-FYEFGATRILNVGISKRFFEQH---YLPLLPY--CFVASQVYRTNNA 124 + + H + E + +G S+ F EQ LL + + + Sbjct: 64 LMIVNPHDLHSTASSEKLLFERVLIGFSRTFIEQGDAGVANLLDHGTSRLIRIPLKHQPE 123 Query: 125 FLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHY-----REEQVIDDVPQWLKSTVE 179 + ++++ +T V + ++ RL + + S + Sbjct: 124 IERLLHSMLAECQTEQTHYSSLVRSLMNELLIRLHRIETTLQSQTHEYEHPMHQKISEIA 183 Query: 180 KMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNY 239 + + LE + S YL+R R G + + +RI A+K L + Sbjct: 184 QYIKSNFHEKLTLEQVAKQFYISPSYLSRVFTRLTGFHFREYVQVVRIREAQKMLVSSRD 243 Query: 240 SVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 SV I+ AG+ + F KTFKK+ TP YRK+ Sbjct: 244 SVQIISELAGFEHIAHFNKTFKKIAGTTPLQYRKR 278 >UniRef50_A8S1P5 Putative uncharacterized protein n=2 Tax=Clostridium RepID=A8S1P5_9CLOT Length = 309 Score = 156 bits (395), Expect = 8e-37, Method: Composition-based stats. Identities = 57/255 (22%), Positives = 104/255 (40%), Gaps = 18/255 (7%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATR-----ILNV 94 H H+ YE ++ G N + + GD + + H + IL V Sbjct: 30 HFHNQYEIFYIIEGERLFFFNNREYVARSGDLILVDTNLIHMTKSVTAEDTGHNRVILYV 89 Query: 95 GISK-RFFEQHY--LPLLPYCFVASQVYRTNNA----FLTYVETVISSLNLRETGLEEFV 147 + + F+ Y L L+ + VY + FL + + ++ + + + Sbjct: 90 SYDRMKAFDGQYPSLQLVRFFHEHYGVYHLDKEQQALFLNFYRNLRIAMTEKAHNYKVGI 149 Query: 148 EMVTFYVINRLRHYREEQV-----IDDVPQWLKSTVEKMHDKEQFSE-SALENMVALSAK 201 ++ T + ++ Y +Q D P++ + + E + +LE + A Sbjct: 150 DLETLTWLFKITSYVSKQEGASPHSSDHPKYRTAYAIADYLSENCEQNISLEELAAHFYL 209 Query: 202 SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFK 261 S+ Y+ R + G T + N RI AK+ LE T+ S+++IA E GY S + F + FK Sbjct: 210 SKYYVCRTFKEITGYTVTEYTNIHRIRKAKRLLEETDMSISEIAHELGYESLTYFERMFK 269 Query: 262 KLTSFTPKSYRKKLT 276 + +P YRK L Sbjct: 270 SFMTISPLKYRKTLN 284 >UniRef50_A5ZHU6 Putative uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZHU6_9BACE Length = 284 Score = 156 bits (394), Expect = 9e-37, Method: Composition-based stats. Identities = 54/280 (19%), Positives = 95/280 (33%), Gaps = 15/280 (5%) Query: 12 ATAREQQLFNGKNFHVFIYNKTESI-SGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 A E +F T SI + LH+HD +E V+ G + GD Sbjct: 5 AIPYELPEVENHSFFFIDQRVTTSIEAKLHRHDAWELYYVVHGYGKRMAGDTLQPFAAGD 64 Query: 71 FVFIPLGSHHQSFY------EFGATRILNVGISKRFFEQ--HYLPLLPYCFVASQVYRTN 122 IP H Y + G R L V S E+ P L Sbjct: 65 VALIPPSMLHHWEYSPDSADDDGYVRYLMVAFSHSLVERCMAVFPELRNRLTGITFPTNA 124 Query: 123 NAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMH 182 F T I + + ++E + + + + P ++ V +M Sbjct: 125 LKFGTGSSQTIRRILSQMNDMDELGRLCEMFRLLPAIFTSSDHTFAGKPMNIERDVRRMQ 184 Query: 183 D------KEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEM 236 +L+++ A ++ +R G T Q + + R+N A + L+ Sbjct: 185 QICVYVMTHYIHTISLDDIAAEVGMNRSAFCSYFKRCKGMTFSQYVTQYRLNTACELLKH 244 Query: 237 TNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 + V++I F G++ F++ FK +P YR++ Sbjct: 245 SQKQVSEICFTVGFNDLPHFVRVFKNTLGMSPSKYRRRFQ 284 >UniRef50_C0D5Z0 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D5Z0_9CLOT Length = 334 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 95/248 (38%), Gaps = 11/248 (4%) Query: 41 QHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRF 100 H E LVL G+ L+ D + I H S + T L + IS+ + Sbjct: 47 WHPSLEIMLVLEGKLTAYSEQGVFELQEDDLLVINPNIGHASMLQSPRTVALVIHISQSY 106 Query: 101 FEQHYLPLLPYCFVASQVYRTNNAFLTYVET----VISSLNLRETGLEEFVEMVTFYVIN 156 EQ + +FL + + ++L+ + F + + +++ Sbjct: 107 LEQLCGNAAIPNLTCYSASEADRSFLKPLRAGIAAIYTTLSEKSQTGRLFTQSQIYALLS 166 Query: 157 RLRHYR-------EEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRA 209 L Y +EQ Q L T+ K + + L + LS + Y++ Sbjct: 167 FLLRYNADNDLRPKEQRQKAEQQKLIHTMIKYINHHFRDKVTLSQLAELSGMNLCYVSTF 226 Query: 210 TQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPK 269 + + G + R+ +A Q+ T S+ DIA ++G+ F + F+K + +P Sbjct: 227 FKAHTGVGFQDYLTRKRLAYAAYQINNTEDSIVDIAMDSGFPDVKAFNQAFRKYFNLSPG 286 Query: 270 SYRKKLTE 277 YR +L++ Sbjct: 287 QYRSELSK 294 >UniRef50_A7AA81 Putative uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AA81_9PORP Length = 287 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 45/245 (18%), Positives = 94/245 (38%), Gaps = 13/245 (5%) Query: 38 GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGIS 97 G H+H E V G + + + + + I H T ++ + Sbjct: 41 GPHKHLRIEINYVKKGNCILHLENESISFSENEMMVICSNVEHTFEAGSEDTTLMQLEFL 100 Query: 98 KRFFE----------QHYLPLLPYCFVASQVYRTNN-AFLTYVETVISSLNLRETGLEEF 146 F + P+ + + NN + V+ +++ +N + + Sbjct: 101 PEVFSRFNPDGHGQMKDLAPVTIFSEENRLIKIVNNVRIMRAVQRIVNEMNQKSKYYQYL 160 Query: 147 VEMVTFYVINRLRHYREEQVID-DVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEY 205 V M ++ + Y +E + LK + + Q S+ + ++ + + + Y Sbjct: 161 VVMYYAELLILIYRYLDEAYLPICTNDSLKKAISYIRLNYQ-SDITISDVASQTGVGERY 219 Query: 206 LTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTS 265 L + +Y +P+ +N+IRIN A + L T SV ++ F G+ SP F + FK+ Sbjct: 220 LRKLFSQYLNLSPLDYLNQIRINKAIELLRNTEMSVKEVCFACGFQSPQYFSRIFKQQMG 279 Query: 266 FTPKS 270 +P+ Sbjct: 280 ISPRE 284 >UniRef50_C9LQ90 Putative transcriptional regulator n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQ90_9FIRM Length = 295 Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats. Identities = 57/254 (22%), Positives = 101/254 (39%), Gaps = 17/254 (6%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG-ATRILNVGISK 98 H HD EF +L G+ I K + RGDF+ I + +S G R + I Sbjct: 42 HWHDELEFIYILDGKMDFHIEEKILTASRGDFLAIHASAMRRSAPHNGEDCRFIRALIHP 101 Query: 99 RFFEQH-------YLPLLPY----CFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFV 147 ++ PLL CF+ + + G E Sbjct: 102 SLLTENQSVRNRLLSPLLGNTSRRCFLVPSASPDAPRRGELLREINRINEKHLPGFELES 161 Query: 148 EMVTFYVINRLRHY--REEQVIDDVPQWLKSTVEKM--HDKEQFSE-SALENMVALSAKS 202 + ++ RL E+Q +D+P S +M + + E +L + A + S Sbjct: 162 IGLLHILLARLYALFPPEKQTQEDMPGTDISAQRRMVAYISHHYPEKISLAGIAAAGSVS 221 Query: 203 QEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKK 262 + + ++Y ++P+ +N R+ ++ L+ T S+ +IA G+SS S + K F + Sbjct: 222 RSKCCQLFKKYMQQSPIDFLNRYRLEISRNLLDSTENSILEIANACGFSSQSYYTKMFSE 281 Query: 263 LTSFTPKSYRKKLT 276 + TP YR +L+ Sbjct: 282 KFNCTPTQYRSRLS 295 >UniRef50_A8SS52 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SS52_9FIRM Length = 300 Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats. Identities = 56/260 (21%), Positives = 92/260 (35%), Gaps = 15/260 (5%) Query: 30 YNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQS------- 82 + H HD E ++L+G+ ++ G+ FI G H Sbjct: 35 HQFISGCIPPHWHDELEVFVLLSGQVEVVTGDISCIVNAGEGCFINGGVLHTFRALSLGE 94 Query: 83 --FYEFGATRILNVGISKRFFEQHYL-PLLP--YCFVASQVYRTNNAFLTYVETVISSLN 137 ++ F + G F+ Y+ P + + FV + F + + Sbjct: 95 CRYHSFVFESSIVAGAPGSIFDTKYMKPFVEKGHSFVHMKRDEGMEPFFEEFDRCFDACA 154 Query: 138 LRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM---HDKEQFSESALEN 194 E + +I + D+P + ++ M D+ E + Sbjct: 155 GEGYAYEFDIRDSLTRMILCIAQNMNAPGDSDMPHLAEVRIKDMLGWIDRNLKDEITVSG 214 Query: 195 MVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPS 254 + + R +Y PM+ + RI A + L T+ VTDIA E G+SS S Sbjct: 215 IAGSANICVRECQRIFSQYVHYRPMEYVQRRRITLAAELLRTTHRQVTDIALECGFSSVS 274 Query: 255 LFIKTFKKLTSFTPKSYRKK 274 FIK FK + TP YRKK Sbjct: 275 YFIKQFKNIVGCTPTGYRKK 294 >UniRef50_A6BIB0 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BIB0_9FIRM Length = 285 Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 97/252 (38%), Gaps = 12/252 (4%) Query: 38 GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGIS 97 H H+ E L G I + + L+R + H + L + + Sbjct: 30 PAHWHEAMEILFCLNGSVRIHIEHEHLTLQRNQLIVFDSKEVHSIHSDSKLYMFLCIHVD 89 Query: 98 KRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEE----------FV 147 K+ + L Y V ++ Y+ + +L T +E Sbjct: 90 KKQLSVYCPDLELYHIKCRPVSLDDSKSTPYIHLCQLAHDLTRTNVENKNTSAMRSDGTA 149 Query: 148 EMVTFYVINRLRHYREEQVIDDVPQW--LKSTVEKMHDKEQFSESALENMVALSAKSQEY 205 ++ +I Y Q + + ++ + +LE + S+EY Sbjct: 150 LLMLADLIRYFSVYSLPGTTTGTGQSNDILRKIISYVNEHYTEKLSLEEVANQVGFSREY 209 Query: 206 LTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTS 265 R +++ G T ++ +NE+RI+ A + L T+ S++++ E+G+++ ++F + FK++ Sbjct: 210 FCRFFKQHMGITFLRYLNEVRISHAGRILMNTDKSISEVMQESGFTNQTIFNRLFKEIYG 269 Query: 266 FTPKSYRKKLTE 277 TP+ R E Sbjct: 270 MTPRQARNSYAE 281 >UniRef50_C6D5P5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D5P5_PAESJ Length = 276 Score = 155 bits (392), Expect = 1e-36, Method: Composition-based stats. Identities = 52/258 (20%), Positives = 108/258 (41%), Gaps = 12/258 (4%) Query: 28 FIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYE-- 85 + ++ ++ H H YE +++G+ I + +++ GD V I H++ Sbjct: 17 YRKARSHNMPVSHFHSTYEIFCLMSGKREFFIKDRTLVIHEGDIVIISPNILHRTTNTET 76 Query: 86 FGATRILNVGISKRFFEQHYLPLLPYC-----FVASQVYRTNNAFLTYVETVISSLNLRE 140 R++ K Y+ +L + + A T ++T+I+ ++ ++ Sbjct: 77 PEHERLIVNIHEKHMAAGSYVDVLHPLSEREYLIVKCTLQDRLAIETMLQTMIAEMSEKK 136 Query: 141 TGLEEFVEMVTFYVINRLRHYREEQVIDDVPQ-----WLKSTVEKMHDKEQFSESALENM 195 G E + + ++ + + ++ + S V + + +E +L + Sbjct: 137 PGFELYALTLALQLLLICCRHAKSSSMETLESPSPMHERISEVVRYMNSHYMNELSLHLL 196 Query: 196 VALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSL 255 S YL+R + G T ++ +N +RI AKK LE ++ V IA G+ S + Sbjct: 197 AEKFYVSPYYLSRFFKEATGFTFVEYLNSVRIKEAKKLLEQSSMKVNLIAKRVGFGSVTH 256 Query: 256 FIKTFKKLTSFTPKSYRK 273 F + FK +T + P YRK Sbjct: 257 FGRVFKSVTGYVPLHYRK 274 >UniRef50_C6D4D7 Transcriptional regulator, AraC family n=3 Tax=Firmicutes RepID=C6D4D7_PAESJ Length = 289 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 56/259 (21%), Positives = 101/259 (38%), Gaps = 25/259 (9%) Query: 39 LHQH-DYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGIS 97 LH H D+ E +VL G +N + +++GD I + H ++ + RI N+ Sbjct: 30 LHDHVDFSELVIVLNGNATHIVNTEVSFIKKGDVFVIDGATSH-AYKDPHDFRICNIMYR 88 Query: 98 KRFFEQHYLPL-----LPYCFVASQVYRTNNAF----------LTYVETV----ISSLNL 138 L FV YR F L YV ++ I Sbjct: 89 PDILTSAGPDLRTSIGYQALFVLEPFYRNIQPFNSKLSLPIPSLEYVSSLAAFMIEEYTN 148 Query: 139 RETGLEEFVEMVTFYV---INRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENM 195 + G + + + ++R +++Q I L + + M D E + Sbjct: 149 KLQGYQTMLRSRFMELVVYLSRQYQNQDQQGIQGNLMHLANAISFMED-HYLEPLTREQI 207 Query: 196 VALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSL 255 S S +L R Q YY TP + +R+ A L+ T +T++++++G++ + Sbjct: 208 ADKSGISVRHLNRIFQSYYPTTPFAYLLRLRLEHACHLLKTTPVPITEVSYKSGFNDSNY 267 Query: 256 FIKTFKKLTSFTPKSYRKK 274 F + F K+ PK YR++ Sbjct: 268 FTRQFTKVYGLAPKVYRRE 286 >UniRef50_C6LL87 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LL87_9FIRM Length = 287 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 58/268 (21%), Positives = 115/268 (42%), Gaps = 15/268 (5%) Query: 23 KNFHVFIYNKTE-SISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQ 81 K+ + ++N H H +E + Y K +L+ GD + I G H+ Sbjct: 16 KDMQIRLHNNDVCENYPPHWHTPFELIMPTESGYSVHCGEKEYVLDEGDIIIICPGVIHE 75 Query: 82 SFYEFGATRILNV----GISKRFFEQHYLPLLPYCFVASQVY-----RTNNAFLTYVETV 132 F RI+ + I + + + P ++ + + + + L + Sbjct: 76 LFSPPKGVRIIFLVSLAQIDLQELDLVISMISPAILISPEKFPQIHAQIHRLMLEIRDEY 135 Query: 133 ISSLNLRETG-LEEFVEMVTF--YVINRLRHYREEQVIDDVPQWLKSTV-EKMHDKEQFS 188 +L E+ +F+E++ + + E + ++++ + + E ++ Sbjct: 136 FRNLPYTESSIYAKFLEILVLVGRCYAEIAQHNFEAKNNKQQEYMEKFLFICNYINEHYA 195 Query: 189 ES-ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFE 247 E +LE + +L+ S+ + TR ++Y T + +N+ RI AK L N SV DI+ + Sbjct: 196 EPLSLEEVASLAGFSKYHFTRLFKQYADTTFYKYLNQKRIAHAKHLLVDKNLSVLDISLQ 255 Query: 248 AGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 G+S+ S F++ F+KLT FTP RK Sbjct: 256 CGFSNLSSFLRMFRKLTGFTPTELRKMY 283 >UniRef50_Q5WI14 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WI14_BACSK Length = 275 Score = 155 bits (391), Expect = 2e-36, Method: Composition-based stats. Identities = 53/260 (20%), Positives = 97/260 (37%), Gaps = 14/260 (5%) Query: 24 NFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSF 83 N +F TE + +H H E + G GK L D +FI H S Sbjct: 17 NLFIFQARTTERVIPMHFHSNMELIYCINGSLRVWHEGKVTTLMDKDMLFINSNVPH-ST 75 Query: 84 YEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGL 143 R+L + K FF + + + + + + L+ + T++ + Sbjct: 76 QSLTENRVLVLYFPKSFFASEQVLIQ----LNTSEEQLDEQVLSNLRTLLMEIYNLHYST 131 Query: 144 EEF--------VEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSE-SALEN 194 + + + +++ E K KE ++E +L Sbjct: 132 GTYDYILAQSRIIELKYWLARHFSQTAELSPATSRSDRQKIQTILDFIKEHYTENISLAE 191 Query: 195 MVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPS 254 + S+ YL+R Y G+T + + + A L+ TN S+T+I++E G+ + Sbjct: 192 TARICGYSEAYLSRMFHEYTGQTFTEYKQILCLEKAIDLLDTTNKSLTEISYETGFPNVK 251 Query: 255 LFIKTFKKLTSFTPKSYRKK 274 F K FK++ TP Y+K Sbjct: 252 SFRKVFKEVMGKTPYEYKKS 271 >UniRef50_C4FXH3 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FXH3_9FIRM Length = 298 Score = 155 bits (391), Expect = 2e-36, Method: Composition-based stats. Identities = 49/246 (19%), Positives = 97/246 (39%), Gaps = 7/246 (2%) Query: 32 KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEF-GATR 90 S +H H++ E L G + R + + + + H + Sbjct: 30 DANWHSTMHHHNFAEIFYCLDGSGYLLTEFGRTPIHKHSLLLVNPFIEHTEHTSLISPLK 89 Query: 91 ILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMV 150 L +GI + LP +N+ F + V++ L + + ++ + Sbjct: 90 YLVIGIKG---PEIILPSHATDNGLFSFEDSNHQFYRLIREVMTECELNQPYSSQIIDHL 146 Query: 151 TFYVINRLRHYREEQVI--DDVPQWLKSTVEKMHDKEQFSE-SALENMVALSAKSQEYLT 207 +I RL + Q+ + P ++ K + FS+ LE + + S+ +L Sbjct: 147 INSLILRLNNLANSQLAMARETPLSASVSLAKHYIDNHFSKNINLEQLEERAHVSRFHLA 206 Query: 208 RATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFT 267 + G +P+ +N++R+ A++ L TNY+V I G++S S F F + T Sbjct: 207 HQFKEELGLSPINYLNQVRLTQAQELLLTTNYTVLQITEMVGFNSVSYFSNKFHEAVGMT 266 Query: 268 PKSYRK 273 P++YR Sbjct: 267 PRAYRN 272 >UniRef50_C0FPB8 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FPB8_9FIRM Length = 304 Score = 155 bits (391), Expect = 2e-36, Method: Composition-based stats. Identities = 64/278 (23%), Positives = 113/278 (40%), Gaps = 27/278 (9%) Query: 26 HVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYE 85 H+ K ++ H H Y E L+G + +NG GDFV I HQ Sbjct: 21 HIEKAEKPGNVFFAHFHYYIEMLYALSGHFRIYLNGIYHEFAAGDFVLINSREVHQIDAL 80 Query: 86 FGA----------TRILNVGISKRFFE-QHYLPLLPYCFVASQVYRT------NNAFLTY 128 ++ G+++ FE ++ LP + + +V + ++A Sbjct: 81 SSEGGSYIVVRFLPELIYDGMTQSHFELKYLLPFITENSIYEKVISSSILNAKHSAIPGL 140 Query: 129 VETVISSLNLRETGLEEFVE----MVTFYVINRLRHYREEQVIDD-----VPQWLKSTVE 179 + +I ++ G E ++ + +++ EE +++D + Q L + Sbjct: 141 MNEIIRESEEKQYGYELAIKNHIGGIFLWLLRYWHANGEEPLLEDFENQQLKQQLSPALT 200 Query: 180 KMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNY 239 M + S + M L S Y +R+ R +NEIRI A+K L T Sbjct: 201 YMITNYEKS-ISAAEMAKLCNLSYSYFSRSFNRLLHMNFSDYLNEIRIREAEKLLVSTTQ 259 Query: 240 SVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 +VT+IA G+ + S FIK F K +PK Y+K++ + Sbjct: 260 NVTEIASAVGFCTTSYFIKQFTKYLHVSPKQYQKQMRQ 297 >UniRef50_D2MNX8 Transcriptional regulator, AraC family n=1 Tax=Bulleidia extructa W1219 RepID=D2MNX8_9FIRM Length = 282 Score = 155 bits (391), Expect = 2e-36, Method: Composition-based stats. Identities = 58/262 (22%), Positives = 107/262 (40%), Gaps = 18/262 (6%) Query: 31 NKTESISGL-HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSF-YEFGA 88 N+ E I L H H +EF +L G Y ++GK L GD I H+ + Sbjct: 15 NEIEEIDELAHWHHSFEFIEILEGEYQCHVSGKTFLAHPGDLCIINRSRIHRILNQKKER 74 Query: 89 TRILNVGISKRFF-------EQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRET 141 R + +F +++ PL + + + + +I ++ + Sbjct: 75 CRKKVLIFDPDYFIHNPEIYQKYVKPLQEETAFSHMQLKFKSGMGAELIHLIDEIDRLNS 134 Query: 142 GLEEFVEMVTF------YVINRLRHYREEQVID---DVPQWLKSTVEKMHDKEQFSESAL 192 EM T L H+++E+++ D+ ++ + + L Sbjct: 135 EKPVGYEMETIGLIYLLLRRLYLAHHQQEKLLQENYDLNSTIQRKMTLYIYEHYAEHLTL 194 Query: 193 ENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSS 252 E + S+ R + Y GK+P+ +N R+ + + L+ ++ S+TDIAFE G+S Sbjct: 195 EKIAQAGLVSKSTCIRLFKEYTGKSPIDFLNRYRLEVSSQLLKNSHRSITDIAFECGFSQ 254 Query: 253 PSLFIKTFKKLTSFTPKSYRKK 274 S F + FKK +P YR++ Sbjct: 255 ASYFNRQFKKEYGSSPNQYRQQ 276 Score = 39.9 bits (92), Expect = 0.089, Method: Composition-based stats. Identities = 17/113 (15%), Positives = 38/113 (33%), Gaps = 1/113 (0%) Query: 114 VASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQW 173 + + Y N+ + I LE+ + +R ++E + Sbjct: 165 LLQENYDLNSTIQRKMTLYIYEHYAEHLTLEKIAQAGLVSKSTCIRLFKEYTGKSPIDFL 224 Query: 174 LKSTVEKMHDKEQFSESALENMVALSAKSQ-EYLTRATQRYYGKTPMQIINEI 225 + +E + S ++ ++ SQ Y R ++ YG +P Q + Sbjct: 225 NRYRLEVSSQLLKNSHRSITDIAFECGFSQASYFNRQFKKEYGSSPNQYRQQK 277 >UniRef50_A7B0C8 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0C8_RUMGN Length = 301 Score = 155 bits (391), Expect = 2e-36, Method: Composition-based stats. Identities = 61/261 (23%), Positives = 103/261 (39%), Gaps = 20/261 (7%) Query: 36 ISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATR---IL 92 + H H+ YE + G N + +++G + + H + T + Sbjct: 26 MRSNHFHNEYEIYFLTEGERLFFFNNRAYQVKKGSLILVDTNLIHMTHAPEDDTTGYTRI 85 Query: 93 NVGISKRFFEQH-----YLPLLPYCFVASQVY----RTNNAFLTYVETVISSLNLRETGL 143 + I K +Q +L L+P+ VY + FL E + + + R Sbjct: 86 ILYIDKFKMQQFDEKFPHLNLVPFFREHYGVYNLTQKQQEKFLHMYEVLKTEFSNRSRSY 145 Query: 144 EEFVEM-VTFYVINRLRHYREEQVIDDVPQWLKS-------TVEKMHDKEQFSESALENM 195 + +EM + Y I+ +R E I D KS + +L+ + Sbjct: 146 KALIEMEIIHYFIDFIRDNPELTPIKDETAIHKSSKYQTIYNIADYISDHYAESISLDGL 205 Query: 196 VALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSL 255 + S+ YL+R+ + G + +N +R AK+ LE T SV++IA GY S + Sbjct: 206 AGVFYLSKFYLSRSFKEVTGYGVNEYVNILRTKRAKQLLEETTLSVSEIAGTVGYESITY 265 Query: 256 FIKTFKKLTSFTPKSYRKKLT 276 F K FK S +P YRK L Sbjct: 266 FEKVFKTYMSISPLKYRKTLN 286 >UniRef50_A6LYV7 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LYV7_CLOB8 Length = 303 Score = 154 bits (390), Expect = 2e-36, Method: Composition-based stats. Identities = 48/286 (16%), Positives = 111/286 (38%), Gaps = 24/286 (8%) Query: 14 AREQQLFNGKNFHVFIYNKT-----ESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLER 68 +E +F + IY + H H +F+ L + I + ++L Sbjct: 15 LQETVKHGSHDFPLAIYTDKFNLFEDGYIRWHWHKEVQFSYSLYDKVVVFIEDEEIILSP 74 Query: 69 GDFVFIPLGSHHQSF-YEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAF-- 125 G+ + I HQ Y+ + ++ L+ +++ + N F Sbjct: 75 GEGIMINSNVLHQIKPYKNIDCMMFSIDFDSTLIGGSEESLIEKKYLSPIIESNNLKFIS 134 Query: 126 -----------LTYVETVISSLNLRETGLE----EFVEMVTFYVINRLRHYREEQVIDDV 170 L+++E V + + G E ++ +V +I ++ + + Sbjct: 135 LKPDVPWQKRILSHLEQVFILSHEKSYGYELEMKNYLSIVWLNLIKEIKEDIKISMPSAS 194 Query: 171 PQWLKSTVEKMHDKEQFSE-SALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINF 229 + + + ++ +++ L+++ + S+ R+ +R TP + + E R++ Sbjct: 195 NDDERVKMAMQYIQKHYADNIDLDSIARAANISKSECCRSFKRILKVTPFEYLMEYRVSK 254 Query: 230 AKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 A + L S+++I+ + G++ S F K FKK + +P YR K Sbjct: 255 AAELLLKNKDSISNISLDVGFNGISYFGKVFKKYRNCSPSEYRTKY 300 >UniRef50_UPI0001C3636B helix-turn-helix domain-containing protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C3636B Length = 274 Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats. Identities = 51/257 (19%), Positives = 111/257 (43%), Gaps = 11/257 (4%) Query: 29 IYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGA 88 I+ K E S H H EFT ++TG+ ++ L G+ + G H Sbjct: 12 IFYKDEFSSKKHWHKEIEFTYLVTGKLIICVDEVMHELHEGELFVVSGGVVHYYIETEEK 71 Query: 89 TRILNVGISKRFFE---QHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEE 145 ++ +S + F+ + + + ++ T +I+ ++ + ++E Sbjct: 72 YKVGIAKMSLQAFDGFSKKVKDFFRGFYSSVLYVAKDDQIKTIFRDIINLISKQNIVIQE 131 Query: 146 FVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM------HDKEQFSE-SALENMVAL 198 V +++ + + E++I + ++ K++ ++ + E ++E L +M + Sbjct: 132 SV-LISRIIDLTVYLSSHEELIKNREEYRKNSDAELLERMRTYFAEHYNEKIGLADMASH 190 Query: 199 SAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIK 258 S+ Y ++ ++ ++ +N RI A+ L T SVT+IA+ G++S F + Sbjct: 191 LGFSESYCSKYIKKKTNMNFLEYLNSCRIMRAETLLRTTENSVTEIAYAIGFTSIQSFNR 250 Query: 259 TFKKLTSFTPKSYRKKL 275 FK +P YRK+L Sbjct: 251 VFKSFCDESPTEYRKRL 267 >UniRef50_C5RQN6 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RQN6_CLOCL Length = 696 Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats. Identities = 59/251 (23%), Positives = 110/251 (43%), Gaps = 13/251 (5%) Query: 38 GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGIS 97 LH H+ E VL GR+F +I + L + I H+ + E IL I Sbjct: 25 PLHWHNCLEILFVLKGRFFVQIESEIYELCEREIEIINADEPHRVYSEDEDNLILVFKIH 84 Query: 98 KRFFEQHYLPLLPYCFVASQV---------YRTNNAFLTYVE-TVISSLNLRETGLEEFV 147 FFE+++ + F + Y+ FL + + + +EE + Sbjct: 85 LDFFEKYFNDVKNIYFYTNSSDEGIQEEDKYQELRKFLAILACEAVQQEEDYDEEVEEQL 144 Query: 148 EMVTFYVINRLRH--YREEQVIDDVPQWLK-STVEKMHDKEQFSESALENMVALSAKSQE 204 + F+++N + Y EE I++ Q+ + + K ++ +L+++ + S Sbjct: 145 VKLLFHLLNNFHYLTYDEEVAIENQVQFQRYHRITKYIHDNYMNKISLQDIASREFLSSY 204 Query: 205 YLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLT 264 YL+ + G + +N R+N + K L ++ +++DI+ E G+S + K FK+L Sbjct: 205 YLSHEIKNMAGTNFIDFLNTTRVNESIKFLLDSDKTISDISEEVGFSHTRYYNKYFKQLY 264 Query: 265 SFTPKSYRKKL 275 + TP YRKK Sbjct: 265 NITPLQYRKKY 275 >UniRef50_A7B0Y7 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0Y7_RUMGN Length = 276 Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats. Identities = 55/256 (21%), Positives = 110/256 (42%), Gaps = 11/256 (4%) Query: 28 FIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQS-FYEF 86 F ++ + S +H H + E V++G N ++ L RGD V IP + H + Sbjct: 25 FSKDEGDWKSIMHTHHFTELLFVVSGEGSFSFNQEQSPLRRGDLVIIPPYTEHTERSSQN 84 Query: 87 GATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEF 146 +GI F F + + + ++ + + G + Sbjct: 85 HPLEYYVLGIDGISFLSQKDRECAQVFCN---FEHDPSIHELFRQMLYEIRTAQYGSQTI 141 Query: 147 VEMVTFYVINRLRHYREEQVIDDVPQWLK-----STVEKMHDKEQFSESALENMVALSAK 201 + + L+ R +Q+I ++ + +++ D L+ + L+ Sbjct: 142 CQHLLEI--LILKIIRSQQLIPVSINSIRMTKECAQIKEYLDSNYAEHITLDTLTGLTHM 199 Query: 202 SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFK 261 ++ Y+ + +Y G +P+Q +N+ R+ A+ L+ TNYS++DIA G+SS S F + F+ Sbjct: 200 NKYYMVHSFTKYAGLSPIQYLNQTRLKRAQHLLKNTNYSISDIASSTGFSSQSYFTQIFR 259 Query: 262 KLTSFTPKSYRKKLTE 277 K + TP YR++ + Sbjct: 260 KNFNMTPVKYRQEHAK 275 >UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=Clostridium RepID=A3DHI5_CLOTH Length = 302 Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats. Identities = 51/269 (18%), Positives = 103/269 (38%), Gaps = 19/269 (7%) Query: 27 VFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEF 86 + ++ T ++H+ +E + G+ EI G + D + I H+ + Sbjct: 30 IERFHDTSWHMEPNKHECFEMVYIKRGKAVFEIAGYPAEIGPNDIIIIKPNQPHKFIVKS 89 Query: 87 GA-TRILNVGISK-RFFEQHYLPLLPYCFVA-----------SQVYRTNNAFLTYVETVI 133 + + + F+ Y + F+ + N + + ++ Sbjct: 90 ESGCEFIVLSFKFVNRFDGQYSDVSLENFLDFVSGKETGPFITLKVSQKNDIIVLLNRIL 149 Query: 134 SSLNLRETGLEEF---VEMVTFYVINRLRHYREEQVIDDVPQWLKSTVE---KMHDKEQF 187 + G E + M F +I+R E I + +K ++ + Sbjct: 150 KERENPDIGSEFLNYLLVMELFVLISRALKMEWENSIKNKSPKIKELIQASVNYINNNYE 209 Query: 188 SESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFE 247 + +L+++ S Y TRA + G +P+ + +IR+ AK+ L+ T+ ++DIA Sbjct: 210 RDISLKDIARYVFLSTSYFTRAFKEEMGISPINYLLKIRVERAKELLKDTDNRISDIALS 269 Query: 248 AGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 G+S+ F FKK TP YRK + Sbjct: 270 VGFSNQQRFNDIFKKYVKLTPLQYRKNVQ 298 >UniRef50_C0ECP6 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0ECP6_9CLOT Length = 313 Score = 154 bits (389), Expect = 3e-36, Method: Composition-based stats. Identities = 48/276 (17%), Positives = 107/276 (38%), Gaps = 26/276 (9%) Query: 23 KNFHVFIYNKTESIS-GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQ 81 KN + +Y H HD++E V TG ++ + + L+ GD + + H Sbjct: 36 KNCSIGVYPHAAFKDVPFHSHDFFELVYVHTGCCVNLVDDQEIPLKEGDICLLNTHAFHT 95 Query: 82 S-FYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFL-------------- 126 E T I N+ + K + LL Y + + + Sbjct: 96 LRCSEPDHTIIFNLLVGKEVLSSSHFQLLSYNDFVANFFLNSLQKQRAEKNYIVFSKQSE 155 Query: 127 -----TYVETVISSLNLRETGLEEFVEMVTFY---VINRLRHYREEQVIDDVPQWLKSTV 178 + +I+ E L + +++ + +I +R+Y+++ + + K + Sbjct: 156 EEKCTELCQQIITEYYENEGALYQESKLIYLFDCLLIELIRNYQQQHNLSIGKKSTKYKI 215 Query: 179 EKM--HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEM 236 ++ + E L+++ ++ +R + G+ +++ ++R++ AK LE Sbjct: 216 SEVIEYMGEHCDTITLQSLADHFCYHPKHFSRILRETTGQNFSELLTDLRMSRAKALLED 275 Query: 237 TNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 + S+T + + GY + + F F+K P YR Sbjct: 276 SQLSITKVMNQVGYHNYTWFGNQFQKQFGKAPSEYR 311 >UniRef50_UPI0001788B1F transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788B1F Length = 292 Score = 154 bits (389), Expect = 3e-36, Method: Composition-based stats. Identities = 44/250 (17%), Positives = 91/250 (36%), Gaps = 19/250 (7%) Query: 38 GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFY-EFGATRILNVGI 96 LH H++YE + V+ G +NG L G + H+ E I NV Sbjct: 34 PLHWHEFYELSYVVGGEGEHRLNGSAYPLSSGTLFLLTPADFHELVSVEDKPLEIYNVIF 93 Query: 97 SKRFFEQHYLPLLPYCFVASQVYR------TNNAFLTYVETVISSLNLRETGLEEFVEMV 150 ++ + + L + F V + E + G E + Sbjct: 94 TEAMMDDN---LYHWLFGGKLVLHAQLEEMQHRQIFADYERMREETGASREGSEIAIRAT 150 Query: 151 TFYVINRLRHYREEQVI--------DDVPQWLKSTVEKMHDKEQFSESALENMVALSAKS 202 ++ L + L+ + +H + LE+ A + S Sbjct: 151 LQRLLVDLNRGSTANCALPTNGTGNRQLNVNLQRALIYIH-HHFREDLRLEDAAAQAQYS 209 Query: 203 QEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKK 262 Y + + G++ + + +R+ FA+ L +++ VT+I + +G+++ F + F++ Sbjct: 210 ATYFSECFSKSVGQSFQRYLQNVRMQFAESLLRVSSLPVTEICYASGFNTLGHFERVFRQ 269 Query: 263 LTSFTPKSYR 272 +P+ YR Sbjct: 270 RKGMSPRQYR 279 >UniRef50_A9KIW0 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KIW0_CLOPH Length = 300 Score = 154 bits (389), Expect = 4e-36, Method: Composition-based stats. Identities = 41/248 (16%), Positives = 98/248 (39%), Gaps = 9/248 (3%) Query: 33 TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGAT-RI 91 T+ S H H++ EF + G + + + ++ D + + H Sbjct: 54 TDWKSLPHSHNFAEFFYITNGSGQFSVEKEILDVKANDLIILNPTIVHTEISNPSKPMEY 113 Query: 92 LNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVT 151 + +GI F+ ++ + Y ++ + + + + Sbjct: 114 IVLGIEGIKFQAE-----DQGYILLNSSAHKSDLHLYFNSLAHEMKSEQPYRNFVCQNLL 168 Query: 152 FYVINRLRHYR--EEQVIDDVPQWLKSTVEKMHDKEQFSE-SALENMVALSAKSQEYLTR 208 + + + ++ + + K + +E + E +E + +L ++ Y Sbjct: 169 NIIFTMILRNDAFKISIVSGPKLTRECNIAKKYIEENYQENITIETLSSLVHLNKYYFVH 228 Query: 209 ATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTP 268 ++ +G +P+ + + RI + L TN+S++ I+ G+SSPS F + FK++T+ TP Sbjct: 229 NFKKQFGTSPINYLIKRRIEESMHLLVSTNHSLSSISQIVGFSSPSYFSQAFKRMTNITP 288 Query: 269 KSYRKKLT 276 + Y+K Sbjct: 289 QEYKKMYK 296 >UniRef50_C4G478 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G478_ABIDE Length = 299 Score = 154 bits (389), Expect = 4e-36, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 94/285 (32%), Gaps = 22/285 (7%) Query: 12 ATAREQQLFNGKNFHVFIYNK--TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 ++ RE + +F + ++ T+ H HD E ++ G +I +L +G Sbjct: 12 SSGRELLTYGTSDFPIAFFDDDLTKVKVPWHWHDELEIIIITEGSVSVQIANSSFVLNKG 71 Query: 70 DFVFIPLGSHHQSFYEFGATRILNVGISKRF--------FEQHYLPLLPY----CFVASQ 117 + F+ G H + + S ++ + P+ S Sbjct: 72 EGYFLNSGILHSAKLLSPKGHQRALIFSPEIAAHNEDIVWKTYIKPIFKKQALPFIKLSP 131 Query: 118 VYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHY-------REEQVIDDV 170 N+ L V + +T V V + ++ E Sbjct: 132 GISWQNSILRLSNDVWLTGAYEKTDYPITVRHNLTKVFSLIKSNIDLIENETEFTHKTKQ 191 Query: 171 PQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFA 230 + + + + + ++ S R ++ TP+Q + + R+ A Sbjct: 192 DELRIKKILFFIENNYSTTITIADIAKSGDISISSCLRLFKQILKTTPIQYLIKYRLQKA 251 Query: 231 KKQLEMTN-YSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 ++ + S+ DIA+ G+S + F + FKK TP Y K Sbjct: 252 VEEFDSLEGRSIGDIAYSCGFSDATYFNRCFKKEFGCTPTEYMAK 296 >UniRef50_D1N6W3 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N6W3_9BACT Length = 256 Score = 153 bits (388), Expect = 4e-36, Method: Composition-based stats. Identities = 44/249 (17%), Positives = 101/249 (40%), Gaps = 11/249 (4%) Query: 24 NFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSF 83 F ++ + + LH+H+ E ++ G I + + G+ + IP H+ Sbjct: 5 EFSYAGFHASTRSTPLHRHNGTELVYIVEGECENRIPFRDRKIAAGELLIIPPELEHRQI 64 Query: 84 YEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGL 143 + G R V + P + + S R++ +++E ++ L +E L Sbjct: 65 -DLGFVRTFYVVFEAK-------PGVFRNDLRSIDVRSDRFVRSWMEQLV--LLYQEQAL 114 Query: 144 EEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQ 203 ++ ++ + R ++P L + + + E A+ + A + S Sbjct: 115 DQCRLLLPALLARITRLEGSIDGTAEIPAGLAAAIRFITY-HFHRELAIREIAASNGMSP 173 Query: 204 EYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKL 263 Y ++ +P + I ++R+ A++ L + ++++I + GY + F + F+K+ Sbjct: 174 SYFNALFHKHMQVSPAEYIKKLRMGHARQLLRNSRLTISEIGEQCGYRNAYYFCRIFRKV 233 Query: 264 TSFTPKSYR 272 TP YR Sbjct: 234 HGCTPGEYR 242 >UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LA91_9FIRM Length = 288 Score = 153 bits (388), Expect = 4e-36, Method: Composition-based stats. Identities = 50/290 (17%), Positives = 99/290 (34%), Gaps = 26/290 (8%) Query: 10 EIATAREQQLFNGKNFHVFIYNKTE----SISGLHQHDYYEFTLVLTGRYFQEINGKRVL 65 I E F + +Y+ + H H+ E+ G + G+ Sbjct: 1 MIPIYHENNTHGTAVFPLQVYSHHDKDGFFSVSQHWHEELEWICAEHGVLNLTVRGRSFT 60 Query: 66 LERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVY------ 119 L G+F FI G H+ G + + + + + + F+ Sbjct: 61 LHPGEFCFINSGELHE-IKSGGPSLHHAIVFNPDILDFTLYDICQHSFIRPVTSGNLIFP 119 Query: 120 --------RTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLR------HYREEQ 165 + L +++ +I + + +++ ++ Sbjct: 120 TLPSVFSPEESQMILFHMQEIIRLYHTLPSCASLSIKIHILQILELFFQADCFLENTISS 179 Query: 166 VIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEI 225 D LK +E +H+ +L ++ + S Y ++ GK P+ INE Sbjct: 180 KEKDSQNKLKKVIEYIHEN-YAGPISLPDLAKICFMSPNYFCHYFKQEIGKPPIAFINEY 238 Query: 226 RINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 RI A + L + V+ +A G+ + S FI+ F++ + TP YR L Sbjct: 239 RIQKACQILTDSELPVSQVAISVGFDNFSYFIRKFREYKNVTPTEYRSHL 288 >UniRef50_A8RST4 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8RST4_9CLOT Length = 307 Score = 153 bits (388), Expect = 4e-36, Method: Composition-based stats. Identities = 53/290 (18%), Positives = 99/290 (34%), Gaps = 33/290 (11%) Query: 13 TAREQQLFNGKNFHVFIY-----NKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLE 67 T RE Q +F Y + + H H+ E V +G ++ GK + L+ Sbjct: 13 TGRELQPHGTPDFPCAGYSSVYTDSAGDVVPWHWHEDLEIIYVESGHLKLQVPGKTLHLK 72 Query: 68 RGDFVFIPLGSHHQSFYEF----------------GATRILNVGISKRFFEQHYLPLLPY 111 +G+ + H + E + + + + P+ Sbjct: 73 QGEGAVVNSNILHFAAAEPLCELHSLVFHPLLVTGEKDSVFSRRYVAPLLQCRSFDICPF 132 Query: 112 CFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVP 171 ++A + N A + G E V + L Y + P Sbjct: 133 DYLAGDLRAGNPA--AVFTAAFDAFCGEPLGYEFVVREKLSCICCCLYMYYSHAMDSSKP 190 Query: 172 ------QWLKSTVEKMHDKEQFSES-ALENMVALSAKSQEYLTRATQRYYGKTPMQIINE 224 ++ + +H E F E+ L + + + R +R +P+Q + + Sbjct: 191 MPDTDNIRIQKMISFIH--EHFQENLDLAQIARAADIGERECLRCFKRAIQTSPLQYLLK 248 Query: 225 IRINF-AKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 R+ A L + S++ IA G++SPS F + F + TP+ YRK Sbjct: 249 YRVTQGASMLLRSPHSSISSIAGMCGFNSPSNFSQMFVRFFKCTPREYRK 298 >UniRef50_C9A3T9 Transcriptional regulator n=1 Tax=Enterococcus gallinarum EG2 RepID=C9A3T9_ENTGA Length = 296 Score = 153 bits (388), Expect = 4e-36, Method: Composition-based stats. Identities = 54/257 (21%), Positives = 107/257 (41%), Gaps = 16/257 (6%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG--ATRILNVGIS 97 H H E + G + I K ++ G V I H +F R+L + + Sbjct: 32 HWHSECEIQYFIEGNRYFLIGEKTYKIQPGTLVMIHPDCVHNTFSGKYIYHDRVLVLYEA 91 Query: 98 KRF---FEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLN----LRETGLEEFVEMV 150 +F + + L + + + A +YV+T+++ + +E + VE Sbjct: 92 SKFPRIAQSMGIDLETFFLKHHGIIQIPPADRSYVQTLLAKIADEVIHKEYNYQVMVETK 151 Query: 151 TFYVINRLRHYREEQVIDDVP-------QWLKSTVEKMHDKEQFSESALENMVALSAKSQ 203 + ++ + + + D P L + + + S +LE + + + Sbjct: 152 LIELFIFIQRIKNFRGLSDEPAESLGKQSELVNQIAAFIRRNYASIHSLEQIASSFYLDK 211 Query: 204 EYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKL 263 YL R +R G T + N RI +++ LE T++ + +IA ++GYS+ + + + FKK Sbjct: 212 SYLCRIFKRATGYTITEYTNIQRIRQSQRLLEDTDWDIAEIARKSGYSNITYYNRVFKKY 271 Query: 264 TSFTPKSYRKKLTEFNQ 280 T +P YRKK + + Sbjct: 272 TETSPLQYRKKQIAYKE 288 >UniRef50_C7G9P1 AraC-type sugar metabolism regulator n=2 Tax=Lachnospiraceae RepID=C7G9P1_9FIRM Length = 291 Score = 153 bits (388), Expect = 5e-36, Method: Composition-based stats. Identities = 59/282 (20%), Positives = 111/282 (39%), Gaps = 18/282 (6%) Query: 16 EQQLFNGKNFHVFIYNKTESI-SGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFI 74 E+Q K+F ++ YN H HDYYEF L G I + L+ GD VFI Sbjct: 11 ERQYMLSKDFEIYYYNDNHFYGVTDHTHDYYEFYFFLEGNVTISIEKEHHHLKPGDMVFI 70 Query: 75 PLGSHHQ--SFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTY---- 128 P G HH S E + IS+ + ++ Y ++ T++ Y Sbjct: 71 PPGIHHHVSSVGETLPYQRFVFWISQDYCQKLKELSKDYVYLIEHAQDTHHFIYHYDVVA 130 Query: 129 -------VETVISSLNLRETGLEEFVEMV---TFYVINRLRHYREEQVIDDVPQWLKSTV 178 + +I ++ G +E+ INR + E L + Sbjct: 131 FNALSAKIFRLIEEIHADRFGKAAKIELCVNDLMLHINRAVYEAEHPAARKDASGLYDGI 190 Query: 179 EKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTN 238 + + + +L+++ S+ +++ + +G + Q I + R++ + ++N Sbjct: 191 LQYIESHLDEDLSLDSLSKAFFVSKYHISHIFKDNFGISVHQYITKKRLSM-CRDAILSN 249 Query: 239 YSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 ++T I G+ + F + FKK +PK Y++ + Q Sbjct: 250 ENITKIYLMYGFKDYTSFFRAFKKEYGISPKEYKELYAQKPQ 291 >UniRef50_C6CVW1 Transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6CVW1_PAESJ Length = 294 Score = 153 bits (388), Expect = 5e-36, Method: Composition-based stats. Identities = 50/265 (18%), Positives = 100/265 (37%), Gaps = 18/265 (6%) Query: 31 NKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATR 90 + + LH H+ + TL G +ING L G +FI H Sbjct: 30 PEGRGFNDLHWHEELQITLATKGNLTIQINGIDYRLHTGQAIFINKSVLHIVTDLTAEGE 89 Query: 91 ILNVGISKRFF--------EQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETG 142 ++ ++ E++Y+ ++ S + + + + ++ S+ Sbjct: 90 YVSFNFPEKLLAFYSDSAMEKNYVLPFTNSYLLSFEIKGDTEWQKQILNILWSMKKEFEI 149 Query: 143 LEEF----------VEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESAL 192 + + V++ + N E + + Q + + + L Sbjct: 150 KKSWGWQYEISIKTVQLWLILISNISLPSEESSKHNRLKQERLQLMLSFIHQNYSNPITL 209 Query: 193 ENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSS 252 + + + S TR+ + TP + + RIN + + L+ T Y++T+IA G++ Sbjct: 210 KEIADAAHLSVSECTRSFKTSIRMTPYSYLVKYRINKSCELLQSTEYTITEIASRVGFNQ 269 Query: 253 PSLFIKTFKKLTSFTPKSYRKKLTE 277 + FI+ FKK TPK +RK TE Sbjct: 270 VNHFIQAFKKDLKLTPKEFRKNRTE 294 >UniRef50_A8RPB8 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RPB8_9CLOT Length = 335 Score = 153 bits (388), Expect = 5e-36, Method: Composition-based stats. Identities = 55/251 (21%), Positives = 110/251 (43%), Gaps = 23/251 (9%) Query: 42 HDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGIS---- 97 HD+YE LV +N R+ L G+ + I G H + G + +N+ Sbjct: 82 HDFYEIILVTENSLDILLNNDRIKLGHGNLLLIRPGDIHTKI-QTGDSVHINLAFPAYTV 140 Query: 98 --------------KRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGL 143 K F + P++ + + + + +FL + + S + + T L Sbjct: 141 NSLFGYLYNSQAPRKELFAGSHSPIVRLSTIDTLMIQNRLSFLNQLSS--SDMEEKNTHL 198 Query: 144 EE-FVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKS 202 ++++ Y+I L + ++P WL +E + + + + ++ +V + +S Sbjct: 199 RAILIDIMYSYIIPELEKQKRSSDASNLPAWLVPALEGLSNPKNLT-MGMDYLVRQTQRS 257 Query: 203 QEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKK 262 E++ R +++ G TP IN R+N+A L T+ + D+ +E+G+ S + F FKK Sbjct: 258 PEHICRMFRKHLGITPSAYINGKRLNYAANLLIHTDMEIVDVIYESGFQSINYFYHLFKK 317 Query: 263 LTSFTPKSYRK 273 +P Y+K Sbjct: 318 EYGISPVKYKK 328 >UniRef50_C5RJE9 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RJE9_CLOCL Length = 285 Score = 153 bits (388), Expect = 5e-36, Method: Composition-based stats. Identities = 52/274 (18%), Positives = 103/274 (37%), Gaps = 23/274 (8%) Query: 21 NGKNFHVFI-YNKTESISGLHQH-DYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGS 78 N + F FI Y + +H H D+ E +V+ G ++ ++ +++GD I + Sbjct: 11 NDEGFPFFIQYGYHSNNLSIHTHTDFSELVIVMNGTATHIVDNEKFNIKKGDVFVINSNT 70 Query: 79 HHQSFYEFGATRILNVGISKRFFEQHYLPLLPY-----CFVASQVYRTNNAFLT------ 127 H + RI N+ + FV + ++F + Sbjct: 71 CH-GYENAKDFRICNIMYRSENLLLADYDIKKNAGFHALFVIEPYFTKEHSFKSNLTLKP 129 Query: 128 --------YVETVISSLNLRETGLEEFVEMVTFYVINRL-RHYREEQVIDDVPQWLKSTV 178 +++++S + G + + + ++ L R Y + V + Sbjct: 130 LDFEKIHILLDSLLSEYMTKTDGWKTSTKALFMLLVVTLARLYDFGNSSEKVDVINIAKS 189 Query: 179 EKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTN 238 + + +++ + +S S + R Y TP+ I +RI A L+ T Sbjct: 190 ISYIENHYTEDISIDLLAKISHYSPRHFARIFSETYSTTPLNYIISLRIRRACSLLKETT 249 Query: 239 YSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 ++ IA + G+S + F + FKK TPK YR Sbjct: 250 LPISTIAIQCGFSDSNYFSRIFKKNLYLTPKQYR 283 >UniRef50_Q9S309 Putative AraC-type Regulator n=1 Tax=Ruminococcus flavefaciens RepID=Q9S309_RUMFL Length = 282 Score = 153 bits (388), Expect = 5e-36, Method: Composition-based stats. Identities = 57/279 (20%), Positives = 108/279 (38%), Gaps = 13/279 (4%) Query: 7 NAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLL 66 ++ E + + F + N H H+ E + L + G L Sbjct: 1 MIKNLSGDYETVEYENQRFVMLYDNDEIEEYPTHWHNAVEVIIPLHNGFTVTAGGVDYHL 60 Query: 67 ERGDFVFIPLGSHHQSFYEFGATRIL---NVGISKRFFEQHYLPLLPYCFVASQVYRTNN 123 + + IP G H + G I N IS + +P+ F + Sbjct: 61 NEKEIIIIPPGELHSMPAQEGRRIIFQCDNSIISDVPALEAIVPVFSEAFHITPTISKEL 120 Query: 124 AFLTY--VETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLK------ 175 L+ + + S + + + + + ++ +R Y+ Q D L Sbjct: 121 YILSRKSILDIYSEYYSKSSLSDVRIYLCLIKMLTSVREYQLTQAADAFSGELGGRDDTR 180 Query: 176 --STVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQ 233 S V K ++ E LE + +++ S+ + +R ++Y + +Q IN RI A++ Sbjct: 181 KFSMVMKYINQNYMYEIPLEKIASIAGYSKYHFSRIFKKYNNVSYIQYINSKRIKAAERL 240 Query: 234 LEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 L N SVT++A AG++S + F + FKK + TP ++ Sbjct: 241 LIDPNLSVTEVAMRAGFASLTTFNRAFKKAKNCTPTEFQ 279 >UniRef50_C9B1F2 Transcriptional regulator n=4 Tax=Enterococcus RepID=C9B1F2_ENTCA Length = 278 Score = 153 bits (387), Expect = 6e-36, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 94/249 (37%), Gaps = 11/249 (4%) Query: 32 KTESISGLHQHDYYEFTLVLTGRYFQEINGK-RVLLERGDFVFIPLGSHHQSFYEFGA-T 89 ++ES +H HD+ E +++L G + + G + G H G + Sbjct: 22 QSESHGEMHHHDFLEISVLLEGESTYYFEKEPAKKIRAGSVMLFNPGVDHCELQPKGTRS 81 Query: 90 RILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEM 149 L++G+ E P ++ + ++ L ++ + + + Sbjct: 82 HQLHIGLKNISLEGFKRNFFPNKHPLLELGKYHHQVLEKAWQLVRESSEERDEFQLMQKA 141 Query: 150 VTFYVINRLRHYREEQVIDDVP---------QWLKSTVEKMHDKEQFSESALENMVALSA 200 V ++ + E I+ +P Q + + + E LE + Sbjct: 142 VLMEMLVYILRGLNEDHINVLPYLSKSQRRQQQIVNYTVYYLENHYKEEITLEKLAQDQF 201 Query: 201 KSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTF 260 S YL++ + G +P+ + EIR+ AK L+ N ++ ++A GY F K+F Sbjct: 202 LSPTYLSKIFKEATGVSPINYLIEIRLKRAKDMLKNENLTIKEVASAVGYQDAYHFSKSF 261 Query: 261 KKLTSFTPK 269 KKL +P Sbjct: 262 KKLYGVSPS 270 >UniRef50_UPI0001C36B6C helix-turn-helix domain-containing protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36B6C Length = 303 Score = 153 bits (387), Expect = 6e-36, Method: Composition-based stats. Identities = 56/291 (19%), Positives = 116/291 (39%), Gaps = 22/291 (7%) Query: 6 INAPEIATAREQQLFNGKNFHVFIY-----NKTESISGLHQHDYYEFTLVLTGRYFQEIN 60 IN + A E ++ ++I + + H HD EF ++ G IN Sbjct: 8 INVDIMQDASEIVRYDETGIPLYIQTGELSRYPDRKALCHWHDDLEFIRIVHGEMNYYIN 67 Query: 61 GKRVLLERGDFVFIPLGSHHQ-SFYEFGATRILNVGISKRFF-------EQHYLPLLPY- 111 GK ++L+ D + + H S L + + F +++ LPLL Sbjct: 68 GKNLVLKEHDGIMVNTRQMHYGSSINQNDCSFLCILVHPALFSSNRLIYQKYLLPLLEDR 127 Query: 112 --CFVASQVYRTNNAF-LTYVETVISSLNLRETGLEEFVEMVTFYVINRL-RHYREEQV- 166 FV R ++ F L + + E G E + + + + L R ++ + Sbjct: 128 ETEFVYLDSGRPDHGFILDCLMEMTQLKEHGEYGYELEIIGLFYLIWRHLARQFKAGKTA 187 Query: 167 ---IDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIIN 223 I+D+ ++ + + + L + A + + ++Y ++P+ +N Sbjct: 188 APGIEDMDTKVQKDMVSFIYQHYTEKLTLSAIAASGGVCRSKCCQIFKKYLCQSPIDFLN 247 Query: 224 EIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 R+ + L+ T+ S+T+IA E G++ S + + F + TP+ +R + Sbjct: 248 SYRLEVSSHLLKKTDKSITEIATECGFNHLSYYSELFMRHYGCTPRQFRSQ 298 >UniRef50_A6BF68 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BF68_9FIRM Length = 348 Score = 153 bits (387), Expect = 6e-36, Method: Composition-based stats. Identities = 57/282 (20%), Positives = 108/282 (38%), Gaps = 23/282 (8%) Query: 16 EQQLFNGKNFHVFIYNKTES-ISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFI 74 + + Y+ +E + LH HDY E + V+ G + Q I K V+ ++GD I Sbjct: 65 YATMMPSPENFCYHYSYSEGKYTQLHTHDYLELSYVVEGEFHQRILNKDVVFQKGDLCLI 124 Query: 75 PLGSHHQSFYEFGATRILNVGISKRFF---------EQHYLPLLPYCFVASQVYRTNNAF 125 HQ + +L +GI+ F Q L L + + + F Sbjct: 125 DKNCLHQDCLTDQSGVVLFIGIANDMFTEIMNENSTPQKILSFLQSALLKQKDVQQFLHF 184 Query: 126 ----------LTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQ--- 172 + ++ ++G + + F + L + + + Q Sbjct: 185 RPSDGASESLDDSLLLLLKESYSPDSGSRYITKGLLFRIFRILSTQYDFSLSKEQKQTMN 244 Query: 173 WLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKK 232 W+ + + F + ++++V ++Y R +R G T + +IR+ A+ Sbjct: 245 WIVFEEISDYIRAHFRDITIQDLVDEFHYQEDYFNRLIKRKTGLTYSAYVQQIRLERAEH 304 Query: 233 QLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 L T+ S+ +IA GY + F K F++ TP SYR+ Sbjct: 305 LLVSTDKSIEEIADSVGYHNKGYFYKLFQEKYEETPASYRRH 346 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P17410 HTH-type transcriptional regulator chbR n=135 Ta... 270 3e-71 UniRef50_C4X747 Negative transcriptional regulator of cel operon... 249 6e-65 UniRef50_D2TGS1 Chb operon repressor n=15 Tax=Enterobacteriaceae... 248 2e-64 UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=P... 232 8e-60 UniRef50_UPI0001788255 transcriptional regulator, AraC family n=... 231 3e-59 UniRef50_B7DQ49 Transcriptional regulator, AraC family n=1 Tax=A... 229 9e-59 UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostri... 228 1e-58 UniRef50_A8S9Z6 Putative uncharacterized protein n=1 Tax=Faecali... 228 2e-58 UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dict... 224 4e-57 UniRef50_C6IZN9 AraC family transcriptional regulator n=1 Tax=Pa... 223 8e-57 UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligr... 222 1e-56 UniRef50_C5RE92 Transcriptional regulator, AraC family n=3 Tax=C... 221 2e-56 UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=C... 221 3e-56 UniRef50_C6LDM6 Transcriptional regulator, AraC family n=1 Tax=B... 219 6e-56 UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacte... 219 8e-56 UniRef50_A8SCU0 Putative uncharacterized protein n=1 Tax=Faecali... 219 1e-55 UniRef50_C6LDG4 Transcriptional regulator, AraC family n=3 Tax=C... 218 2e-55 UniRef50_C9LA22 Transcriptional regulator, AraC family n=2 Tax=C... 218 3e-55 UniRef50_C8WV57 Transcriptional regulator, AraC family n=2 Tax=A... 217 3e-55 UniRef50_B0MH78 Putative uncharacterized protein n=1 Tax=Anaeros... 217 4e-55 UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1... 216 5e-55 UniRef50_A5N4U3 Predicted transcriptional regulator n=2 Tax=Clos... 216 1e-54 UniRef50_UPI0001789C32 transcriptional regulator, AraC family n=... 215 1e-54 UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacte... 215 1e-54 UniRef50_B1R0P6 Transcriptional regulator, AraC family protein n... 215 2e-54 UniRef50_Q9KBM0 Transcriptional regulator (AraC/XylS family) n=1... 214 2e-54 UniRef50_C0C2H5 Putative uncharacterized protein n=1 Tax=Clostri... 214 2e-54 UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostri... 214 3e-54 UniRef50_A8SQD4 Putative uncharacterized protein n=2 Tax=Coproco... 214 3e-54 UniRef50_C6D3A6 Transcriptional regulator, AraC family n=1 Tax=P... 213 6e-54 UniRef50_A6LYY5 Helix-turn-helix-domain containing protein, AraC... 213 6e-54 UniRef50_C7H4U6 Transcriptional regulator, AraC family n=1 Tax=F... 212 7e-54 UniRef50_Q0TS97 Transcriptional regulator, AraC family n=6 Tax=C... 212 7e-54 UniRef50_UPI0001789C33 transcriptional regulator, AraC family n=... 212 9e-54 UniRef50_A7VU88 Putative uncharacterized protein n=1 Tax=Clostri... 211 3e-53 UniRef50_C0EGN7 Putative uncharacterized protein n=1 Tax=Clostri... 210 4e-53 UniRef50_C6D193 Transcriptional regulator, AraC family n=2 Tax=B... 210 4e-53 UniRef50_C7G755 Transcriptional regulator, AraC family n=1 Tax=R... 210 6e-53 UniRef50_A7VQ18 Putative uncharacterized protein n=1 Tax=Clostri... 209 6e-53 UniRef50_UPI0001BC2F1F 2-isopropylmalate synthase n=1 Tax=Butyri... 209 6e-53 UniRef50_A7VID9 Putative uncharacterized protein n=4 Tax=Clostri... 209 1e-52 UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 T... 209 1e-52 UniRef50_C6J7Z0 Helix-turn-helix domain-containing protein n=1 T... 209 1e-52 UniRef50_B6FM02 Putative uncharacterized protein n=2 Tax=Clostri... 208 2e-52 UniRef50_C6L8V9 Transcriptional regulator, AraC family n=1 Tax=B... 208 2e-52 UniRef50_C7IIE8 Transcriptional regulator, AraC family n=1 Tax=C... 208 2e-52 UniRef50_C5RYV2 AraC family transcriptional regulator n=1 Tax=Ac... 208 2e-52 UniRef50_C9AXT8 Putative uncharacterized protein n=2 Tax=Enteroc... 207 2e-52 UniRef50_A8SQN1 Putative uncharacterized protein n=2 Tax=Clostri... 207 3e-52 UniRef50_UPI0001788C0B transcriptional regulator, AraC family n=... 207 4e-52 UniRef50_C0EGI4 Putative uncharacterized protein n=1 Tax=Clostri... 206 5e-52 UniRef50_B0AA61 Putative uncharacterized protein n=1 Tax=Clostri... 206 6e-52 UniRef50_C6L914 Transcriptional regulator, AraC family n=1 Tax=B... 206 8e-52 UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostri... 206 8e-52 UniRef50_Q7UYE3 L-rhamnose operon transcriptional activator n=1 ... 205 1e-51 UniRef50_C6JFK6 Transcriptional regulator n=1 Tax=Ruminococcus s... 205 1e-51 UniRef50_UPI0001C35241 AraC family transcriptional regulator n=1... 205 1e-51 UniRef50_A8SGH8 Putative uncharacterized protein n=2 Tax=Bacteri... 204 2e-51 UniRef50_UPI0001BC4191 helix-turn-helix domain-containing protei... 204 2e-51 UniRef50_C6D359 Transcriptional regulator, AraC family n=2 Tax=B... 204 2e-51 UniRef50_B5CQG2 Putative uncharacterized protein n=1 Tax=Ruminoc... 204 3e-51 UniRef50_C6JD68 Transcriptional regulator n=1 Tax=Ruminococcus s... 204 4e-51 UniRef50_C0EDI6 Putative uncharacterized protein n=2 Tax=Clostri... 204 4e-51 UniRef50_C6JCU7 Transcriptional regulator n=3 Tax=Ruminococcus R... 204 4e-51 UniRef50_C7H5Z6 Transcription regulator, AraC family n=2 Tax=Rum... 203 4e-51 UniRef50_C0EIL7 Putative uncharacterized protein n=1 Tax=Clostri... 203 4e-51 UniRef50_C6LHD5 Putative transcriptional regulator YfiF n=1 Tax=... 203 5e-51 UniRef50_C5RI71 Transcriptional regulator, AraC family n=1 Tax=C... 203 5e-51 UniRef50_C5RKC4 Transcriptional regulator, AraC family n=1 Tax=C... 203 5e-51 UniRef50_C1I2I2 Transcriptional regulator n=1 Tax=Clostridium sp... 203 6e-51 UniRef50_UPI000178AA6A transcriptional regulator, AraC family n=... 203 6e-51 UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostri... 202 9e-51 UniRef50_UPI0001C36B6C helix-turn-helix domain-containing protei... 202 1e-50 UniRef50_C4Z3B4 AraC family transcriptional regulator, L-rhamnos... 202 1e-50 UniRef50_B1HRT8 Hypothetical transcriptional regulator (AraC/Xyl... 202 1e-50 UniRef50_A9KRL7 Transcriptional regulator, AraC family n=1 Tax=C... 202 1e-50 UniRef50_B4AEM1 Transcriptional regulator n=1 Tax=Bacillus pumil... 202 2e-50 UniRef50_A8MEF5 Transcriptional regulator, AraC family n=1 Tax=A... 201 2e-50 UniRef50_C3RLG7 Transcriptional regulator n=2 Tax=Bacteria RepID... 201 2e-50 UniRef50_A6M2W7 Helix-turn-helix-domain containing protein, AraC... 201 2e-50 UniRef50_A8RTE5 Putative uncharacterized protein n=2 Tax=Clostri... 201 2e-50 UniRef50_A8RST4 Putative uncharacterized protein n=3 Tax=Clostri... 201 2e-50 UniRef50_C4ZF37 L-rhamnose operon transcriptional activator n=4 ... 201 2e-50 UniRef50_A4CQ66 Activator protein MtlR n=10 Tax=Bacteroidetes Re... 201 3e-50 UniRef50_A6TKQ3 Helix-turn-helix-domain containing protein, AraC... 201 3e-50 UniRef50_A6LYV7 Helix-turn-helix-domain containing protein, AraC... 201 3e-50 UniRef50_A7B0D2 Putative uncharacterized protein n=1 Tax=Ruminoc... 201 3e-50 UniRef50_A6LR84 Transcriptional regulator, AraC family n=2 Tax=C... 201 3e-50 UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnos... 200 4e-50 UniRef50_UPI0001C356F7 AraC family transcriptional regulator n=1... 200 4e-50 UniRef50_C6JJH4 Putative uncharacterized protein n=1 Tax=Fusobac... 200 4e-50 UniRef50_C4G478 Putative uncharacterized protein n=1 Tax=Abiotro... 200 5e-50 UniRef50_C9L4N0 Putative transcriptional regulator n=1 Tax=Blaut... 200 6e-50 UniRef50_A6BDP1 Putative uncharacterized protein n=3 Tax=Clostri... 199 6e-50 UniRef50_C4ZAF9 2-isopropylmalate synthase n=2 Tax=Eubacterium R... 199 8e-50 UniRef50_C5EQL5 Transcriptional regulator n=1 Tax=Clostridiales ... 199 8e-50 UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryan... 199 8e-50 UniRef50_C7GFI0 Transcriptional regulator, AraC family n=2 Tax=C... 199 9e-50 UniRef50_D2QN46 Transcriptional regulator, AraC family n=1 Tax=S... 199 1e-49 UniRef50_C6IZJ5 Predicted protein n=1 Tax=Paenibacillus sp. oral... 199 1e-49 UniRef50_A8RUK1 Putative uncharacterized protein n=1 Tax=Clostri... 198 1e-49 UniRef50_C0EGR3 Putative uncharacterized protein n=1 Tax=Clostri... 198 1e-49 UniRef50_C5EE80 Helix-turn-helix domain-containing protein n=1 T... 198 2e-49 UniRef50_C0EDY4 Putative uncharacterized protein n=1 Tax=Clostri... 198 2e-49 UniRef50_A8RL67 Putative uncharacterized protein n=1 Tax=Clostri... 198 2e-49 UniRef50_A6VUH3 Cupin 2 conserved barrel domain protein n=2 Tax=... 198 2e-49 UniRef50_C0EDH7 Putative uncharacterized protein n=1 Tax=Clostri... 198 2e-49 UniRef50_C0CH60 Putative uncharacterized protein n=1 Tax=Blautia... 198 2e-49 UniRef50_P96660 Uncharacterized HTH-type transcriptional regulat... 197 2e-49 UniRef50_C0ECP2 Putative uncharacterized protein n=1 Tax=Clostri... 197 2e-49 UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=C... 197 2e-49 UniRef50_C5RE27 Transcriptional regulator, AraC family n=1 Tax=C... 197 3e-49 UniRef50_Q5WL10 AraC/XylS family transcriptional regulator n=1 T... 197 3e-49 UniRef50_Q65MB5 Probable transcriptional regulator n=1 Tax=Bacil... 197 4e-49 UniRef50_C8NIW5 AraC family transcriptional regulator n=2 Tax=Gr... 197 4e-49 UniRef50_B6FJS0 Putative uncharacterized protein n=2 Tax=Clostri... 197 4e-49 UniRef50_UPI0001C3766F two-component response regulator n=2 Tax=... 197 4e-49 UniRef50_C0ECN2 Putative uncharacterized protein n=1 Tax=Clostri... 197 5e-49 UniRef50_C0ABA0 L-rhamnose operon transcriptional activator n=1 ... 197 5e-49 UniRef50_C6D710 Transcriptional regulator, AraC family n=1 Tax=P... 196 5e-49 UniRef50_UPI000178921D transcriptional regulator, AraC family n=... 196 5e-49 UniRef50_C0EDW5 Putative uncharacterized protein n=1 Tax=Clostri... 196 6e-49 UniRef50_Q187Y6 AraC-family transcriptional regulator n=7 Tax=Cl... 196 6e-49 UniRef50_C6W740 Transcriptional regulator, AraC family n=1 Tax=D... 196 6e-49 UniRef50_C6D3L6 Transcriptional regulator, AraC family n=1 Tax=P... 196 7e-49 UniRef50_C3X327 AraC family transcriptional regulator n=1 Tax=Ox... 196 8e-49 UniRef50_B0M9M5 Putative uncharacterized protein n=1 Tax=Anaeros... 196 9e-49 UniRef50_C6JC61 Transcriptional regulator n=1 Tax=Ruminococcus s... 195 1e-48 UniRef50_B2TM72 AraC-family transcriptional regulator n=3 Tax=Cl... 195 1e-48 UniRef50_UPI0001B9ED63 transcriptional regulator, AraC family n=... 195 1e-48 UniRef50_B6FJC5 Putative uncharacterized protein n=1 Tax=Clostri... 195 1e-48 UniRef50_C6D8E9 Transcriptional regulator, AraC family n=1 Tax=P... 195 1e-48 UniRef50_B6VVW1 Putative uncharacterized protein n=2 Tax=Bactero... 195 1e-48 UniRef50_C6JJY6 Transcription regulator n=1 Tax=Fusobacterium va... 195 1e-48 UniRef50_A6LH31 Transcriptional regulator n=5 Tax=Bacteroidales ... 195 1e-48 UniRef50_C9KMM0 Putative AraC-type DNA-binding domain-containing... 195 2e-48 UniRef50_UPI0001788F57 transcriptional regulator, AraC family n=... 195 2e-48 UniRef50_Q5WCU1 AraC/XylS family transcriptional regulator n=1 T... 195 2e-48 UniRef50_C6D083 Transcriptional regulator, AraC family n=1 Tax=P... 195 2e-48 UniRef50_C3R936 Transcriptional regulator n=2 Tax=Bacteroidales ... 195 2e-48 UniRef50_UPI00017894C2 transcriptional regulator, AraC family n=... 194 2e-48 UniRef50_C0EIY9 Putative uncharacterized protein n=1 Tax=Clostri... 194 3e-48 UniRef50_C0EIX6 Putative uncharacterized protein n=1 Tax=Clostri... 194 3e-48 UniRef50_C6J8U5 Putative uncharacterized protein n=1 Tax=Ruminoc... 194 3e-48 UniRef50_A9KLS8 Transcriptional regulator, AraC family n=1 Tax=C... 194 3e-48 UniRef50_A0AET6 Complete genome n=16 Tax=Listeria RepID=A0AET6_L... 194 3e-48 UniRef50_C4ZFS6 Two-component response regulator n=4 Tax=Clostri... 194 3e-48 UniRef50_C5ET70 Putative uncharacterized protein n=1 Tax=Clostri... 194 4e-48 UniRef50_A5ZWD2 Putative uncharacterized protein n=1 Tax=Ruminoc... 194 4e-48 UniRef50_C7G9X0 Transcriptional regulator, AraC family n=3 Tax=L... 193 4e-48 UniRef50_C0C2G6 Putative uncharacterized protein n=1 Tax=Clostri... 193 4e-48 UniRef50_C0EG54 Putative uncharacterized protein n=1 Tax=Clostri... 193 5e-48 UniRef50_B9DS09 AraC family regulatory protein n=18 Tax=Streptoc... 193 5e-48 UniRef50_UPI0001787F16 transcriptional regulator, AraC family n=... 193 5e-48 UniRef50_C0FP55 Putative uncharacterized protein n=1 Tax=Rosebur... 193 5e-48 UniRef50_A8SS52 Putative uncharacterized protein n=1 Tax=Coproco... 193 6e-48 UniRef50_C9A5Y7 Putative uncharacterized protein n=3 Tax=Enteroc... 193 6e-48 UniRef50_Q0ST06 Transcriptional regulator, AraC family n=13 Tax=... 192 7e-48 UniRef50_A5I5L7 AraC-family transcriptional regulator n=10 Tax=C... 192 7e-48 UniRef50_B0A839 Putative uncharacterized protein n=1 Tax=Clostri... 192 9e-48 UniRef50_C7GHF4 Transcriptional regulator, AraC family n=1 Tax=R... 192 1e-47 UniRef50_A5ZHU6 Putative uncharacterized protein n=1 Tax=Bactero... 192 1e-47 UniRef50_D1N597 Transcriptional regulator, AraC family n=1 Tax=V... 192 1e-47 UniRef50_UPI0001788B1F transcriptional regulator, AraC family n=... 191 2e-47 UniRef50_B0A7K6 Putative uncharacterized protein n=1 Tax=Clostri... 191 2e-47 UniRef50_C4IBD9 Helix-turn-helix-domain containing protein, AraC... 191 2e-47 UniRef50_B8DFE8 Transcriptional regulator, AraC family n=18 Tax=... 191 2e-47 UniRef50_B0MR68 Putative uncharacterized protein n=1 Tax=Eubacte... 191 2e-47 UniRef50_UPI0001B9EDE0 transcriptional regulator, AraC family n=... 191 2e-47 UniRef50_C6CV13 Transcriptional regulator, AraC family n=1 Tax=P... 191 3e-47 UniRef50_C0EIV3 Putative uncharacterized protein n=1 Tax=Clostri... 191 3e-47 UniRef50_Q9S309 Putative AraC-type Regulator n=1 Tax=Ruminococcu... 191 3e-47 UniRef50_C6CVW1 Transcriptional regulator, AraC family n=2 Tax=B... 191 3e-47 UniRef50_C6LL87 Transcriptional regulator, AraC family n=1 Tax=B... 191 3e-47 UniRef50_C6LH72 Transcriptional regulator, AraC family n=1 Tax=B... 191 3e-47 UniRef50_C0X5H9 AraC family transcriptional regulator n=22 Tax=E... 191 3e-47 UniRef50_C6J998 Putative uncharacterized protein n=1 Tax=Ruminoc... 190 4e-47 UniRef50_C8P2X0 Putative uncharacterized protein n=1 Tax=Erysipe... 190 4e-47 UniRef50_A5ZP25 Putative uncharacterized protein n=1 Tax=Ruminoc... 190 4e-47 UniRef50_C6CWW3 Transcriptional regulator, AraC family n=1 Tax=P... 190 4e-47 UniRef50_UPI0001969E72 hypothetical protein BACCELL_04741 n=1 Ta... 190 4e-47 UniRef50_C0EGE3 Putative uncharacterized protein n=2 Tax=Clostri... 190 4e-47 UniRef50_A6BIB0 Putative uncharacterized protein n=1 Tax=Dorea l... 190 5e-47 UniRef50_C6D477 Transcriptional regulator, AraC family n=1 Tax=P... 190 6e-47 UniRef50_A5ZUG1 Putative uncharacterized protein n=1 Tax=Ruminoc... 190 6e-47 UniRef50_A4ATK5 Transcriptional regulator n=1 Tax=Flavobacterial... 189 6e-47 UniRef50_C0D5Z0 Putative uncharacterized protein n=1 Tax=Clostri... 189 7e-47 UniRef50_UPI0001BC838F helix-turn-helix- domain containing prote... 189 8e-47 UniRef50_C0EH74 Putative uncharacterized protein n=1 Tax=Clostri... 189 8e-47 UniRef50_C4ZHR1 Xylan 1,4-beta-xylosidase n=1 Tax=Eubacterium re... 189 1e-46 UniRef50_A4BH94 Transcriptional regulator, AraC/XylS family prot... 189 1e-46 UniRef50_C0EIK7 Putative uncharacterized protein n=1 Tax=Clostri... 189 1e-46 UniRef50_C0EGG6 Putative uncharacterized protein n=1 Tax=Clostri... 189 1e-46 UniRef50_C4GA22 Putative uncharacterized protein n=1 Tax=Shuttle... 189 1e-46 UniRef50_C9LQ90 Putative transcriptional regulator n=1 Tax=Diali... 189 1e-46 UniRef50_C6PBN1 Transcriptional regulator, AraC family n=1 Tax=T... 189 1e-46 UniRef50_A7B0Y7 Putative uncharacterized protein n=1 Tax=Ruminoc... 188 2e-46 UniRef50_B7CB27 Putative uncharacterized protein n=1 Tax=Eubacte... 188 2e-46 UniRef50_A9KIW0 Transcriptional regulator, AraC family n=1 Tax=C... 188 2e-46 UniRef50_B7C800 Putative uncharacterized protein n=1 Tax=Eubacte... 188 2e-46 UniRef50_C2LSM7 Transcriptional regulator n=5 Tax=Streptococcus ... 188 2e-46 UniRef50_C6LL88 Transcriptional regulator, AraC family n=1 Tax=B... 187 2e-46 UniRef50_B7AP83 Putative uncharacterized protein n=1 Tax=Bactero... 187 2e-46 UniRef50_C6D019 Transcriptional regulator, AraC family n=1 Tax=P... 187 2e-46 UniRef50_C6D8V3 Transcriptional regulator, AraC family n=1 Tax=P... 187 3e-46 UniRef50_B5JHR7 Transcriptional regulator, AraC family protein n... 187 3e-46 UniRef50_C3QPX4 Transcriptional regulator n=9 Tax=Bacteroides Re... 187 4e-46 UniRef50_B8I9A5 Transcriptional regulator, AraC family n=1 Tax=C... 187 4e-46 UniRef50_C5RJE9 Transcriptional regulator, AraC family n=1 Tax=C... 187 4e-46 UniRef50_C0D9W5 Putative uncharacterized protein n=1 Tax=Clostri... 187 4e-46 UniRef50_C4G7L2 Putative uncharacterized protein n=1 Tax=Abiotro... 187 4e-46 UniRef50_C7IFZ3 Transcriptional regulator, AraC family n=1 Tax=C... 187 4e-46 UniRef50_C7PTM2 Transcriptional regulator, AraC family n=1 Tax=C... 187 4e-46 UniRef50_A7AA81 Putative uncharacterized protein n=1 Tax=Parabac... 187 4e-46 UniRef50_C6D149 Transcriptional regulator, AraC family n=1 Tax=P... 187 4e-46 UniRef50_C3X9W6 Helix-turn-helix domain-containing protein n=1 T... 187 5e-46 UniRef50_Q184W8 AraC-family transcriptional regulator n=5 Tax=Cl... 187 5e-46 UniRef50_C4Z7U7 LacI family transcriptional regulator n=1 Tax=Eu... 186 5e-46 UniRef50_C0EGG3 Putative uncharacterized protein n=1 Tax=Clostri... 186 6e-46 UniRef50_C0D4Y3 Putative uncharacterized protein n=1 Tax=Clostri... 186 6e-46 UniRef50_C0EBM6 Putative uncharacterized protein n=1 Tax=Clostri... 186 6e-46 UniRef50_A5GD53 Transcriptional regulator, AraC family n=1 Tax=G... 186 6e-46 UniRef50_A5KPF1 Putative uncharacterized protein n=1 Tax=Ruminoc... 186 8e-46 UniRef50_A9KK32 Transcriptional regulator, AraC family n=2 Tax=C... 186 8e-46 UniRef50_B2TRB4 Transcriptional regulator, AraC family n=5 Tax=C... 186 1e-45 UniRef50_C6J603 Transcriptional regulator n=5 Tax=Bacilli RepID=... 186 1e-45 UniRef50_C9AW67 Transcriptional regulator n=2 Tax=Enterococcus c... 185 1e-45 UniRef50_A7AFT7 Putative uncharacterized protein n=2 Tax=Parabac... 185 1e-45 UniRef50_B1QXT7 Transcriptional regulator, AraC family n=3 Tax=C... 185 1e-45 UniRef50_B1R1K3 Transcriptional regulator, AraC family n=2 Tax=C... 185 1e-45 UniRef50_C6D5P5 Transcriptional regulator, AraC family n=1 Tax=P... 185 2e-45 UniRef50_A9E4Z4 tRNA delta(2)-isopentenylpyrophosphate transfera... 185 2e-45 UniRef50_B0P341 Putative uncharacterized protein n=9 Tax=Clostri... 185 2e-45 UniRef50_C0EAY1 Putative uncharacterized protein n=1 Tax=Clostri... 185 2e-45 UniRef50_C2KAS7 Transcriptional regulator n=1 Tax=Chryseobacteri... 184 2e-45 UniRef50_D1PQS2 Transcriptional regulator, AraC family n=1 Tax=S... 184 2e-45 UniRef50_C9LCE8 Transcriptional regulator, AraC family n=1 Tax=B... 184 2e-45 UniRef50_A8SUZ2 Putative uncharacterized protein n=2 Tax=Clostri... 184 2e-45 UniRef50_A8S1Q1 Putative uncharacterized protein n=3 Tax=Clostri... 184 2e-45 UniRef50_C7GHR9 Transcriptional regulator, AraC family n=2 Tax=L... 184 2e-45 UniRef50_C5EG17 Helix-turn-helix domain-containing protein n=1 T... 184 3e-45 UniRef50_C0EI59 Putative uncharacterized protein n=1 Tax=Clostri... 184 3e-45 UniRef50_A6LWT0 Transcriptional regulator, AraC family n=1 Tax=C... 184 3e-45 UniRef50_C6I5T7 AraC family transcriptional regulator n=18 Tax=r... 184 3e-45 UniRef50_Q5WI14 AraC/XylS family transcriptional regulator n=1 T... 184 4e-45 UniRef50_UPI0001C3660E AraC family transcriptional regulator n=1... 184 4e-45 UniRef50_C0EIE9 Putative uncharacterized protein n=1 Tax=Clostri... 184 4e-45 UniRef50_C0WDW3 Predicted protein n=2 Tax=Acidaminococcus sp. D2... 184 4e-45 Sequences not found previously or not previously below threshold: UniRef50_D1PQZ7 Transcriptional regulator, AraC family n=1 Tax=S... 187 3e-46 UniRef50_A3ZMH3 Activator protein MtlR n=1 Tax=Blastopirellula m... 184 2e-45 >UniRef50_P17410 HTH-type transcriptional regulator chbR n=135 Tax=Enterobacteriaceae RepID=CHBR_ECOLI Length = 280 Score = 270 bits (692), Expect = 3e-71, Method: Composition-based stats. Identities = 279/280 (99%), Positives = 279/280 (99%) Query: 1 MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEIN 60 MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEIN Sbjct: 1 MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEIN 60 Query: 61 GKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYR 120 GKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYR Sbjct: 61 GKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYR 120 Query: 121 TNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEK 180 TNNAFLTYVETVISSLN RETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEK Sbjct: 121 TNNAFLTYVETVISSLNFRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEK 180 Query: 181 MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYS 240 MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYS Sbjct: 181 MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYS 240 Query: 241 VTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 VTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ Sbjct: 241 VTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 >UniRef50_C4X747 Negative transcriptional regulator of cel operon n=8 Tax=Enterobacteriaceae RepID=C4X747_KLEPN Length = 279 Score = 249 bits (638), Expect = 6e-65, Method: Composition-based stats. Identities = 227/279 (81%), Positives = 250/279 (89%) Query: 1 MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEIN 60 M QP + EI+TAREQQLFNGKNFHV IYNKTES+SGLHQHDYYEFT+VLTGRY+QEIN Sbjct: 1 MRQPRMMTTEISTAREQQLFNGKNFHVVIYNKTESVSGLHQHDYYEFTVVLTGRYYQEIN 60 Query: 61 GKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYR 120 GKRVLLERGDFVFIP+GSHHQSFYEFGATRILNVGIS+RFFE+HYLPLLP+ VASQVY Sbjct: 61 GKRVLLERGDFVFIPMGSHHQSFYEFGATRILNVGISRRFFEKHYLPLLPFGLVASQVYA 120 Query: 121 TNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEK 180 +AFL YVE+VI+SLN RET +EF+E+V+FYVINRLRHYREE V D PQWLK+TVE Sbjct: 121 VQSAFLGYVESVIASLNFRETEFDEFIELVSFYVINRLRHYREEPVADVTPQWLKNTVEA 180 Query: 181 MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYS 240 MHDK +F E ALENMV LS K+QEYLTRATQRYYGKTPMQIIN+IRINFAKKQLE+TNYS Sbjct: 181 MHDKLKFGEGALENMVRLSGKTQEYLTRATQRYYGKTPMQIINDIRINFAKKQLEITNYS 240 Query: 241 VTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFN 279 VTDIA+E+GYSSPSLFIKTFKKLTSFTP SYRK LT N Sbjct: 241 VTDIAYESGYSSPSLFIKTFKKLTSFTPSSYRKHLTSIN 279 >UniRef50_D2TGS1 Chb operon repressor n=15 Tax=Enterobacteriaceae RepID=D2TGS1_CITRO Length = 282 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 241/279 (86%), Positives = 261/279 (93%) Query: 2 MQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEING 61 +Q APEI A EQQLFNGKNFHVFIYNKTES GLHQHDYYEFTLVLTGRY+QEING Sbjct: 4 LQATATAPEITVAHEQQLFNGKNFHVFIYNKTESACGLHQHDYYEFTLVLTGRYYQEING 63 Query: 62 KRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRT 121 KRVLLERGDFVFIPLGSHHQSFYEFG+TRILNVGISK FFEQHY PL+PYCFVASQVYR Sbjct: 64 KRVLLERGDFVFIPLGSHHQSFYEFGSTRILNVGISKHFFEQHYSPLMPYCFVASQVYRI 123 Query: 122 NNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM 181 N+AFLTYVETV++SLN R+TGLEEFVE+VTFY+INRLRHYREEQV DD+PQWLK+TVE M Sbjct: 124 NSAFLTYVETVVASLNFRDTGLEEFVEVVTFYIINRLRHYREEQVPDDIPQWLKATVETM 183 Query: 182 HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSV 241 H+KEQF E+ALENM+ALSAKSQEYLTRATQRYY KTPMQ+INEIRINFAKKQLEMTNYSV Sbjct: 184 HNKEQFGENALENMIALSAKSQEYLTRATQRYYRKTPMQLINEIRINFAKKQLEMTNYSV 243 Query: 242 TDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 TDIAFEAGYSSPSLFIKTFKK+TSFTP SYRKKLT+++Q Sbjct: 244 TDIAFEAGYSSPSLFIKTFKKMTSFTPNSYRKKLTQYSQ 282 >UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTF5_PAESJ Length = 294 Score = 232 bits (593), Expect = 8e-60, Method: Composition-based stats. Identities = 53/286 (18%), Positives = 107/286 (37%), Gaps = 23/286 (8%) Query: 14 AREQQLFNGKNFHVFIYNKTESIS----GLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 +E + + V +Y T LH HD E LV G ++ + L+ G Sbjct: 6 LKEARKHGNPIYPVSLYEITCPSDAPLLDLHWHDELELLLVTEGTAVFRVDLQDYELQAG 65 Query: 70 DFVFIPLGSHHQSFYEFGATRIL-NVGISKRFFEQHYLPLLPYCFVASQVYRTNN----- 123 + +F+ G H + G V F + L +++ + + Sbjct: 66 EAIFVNSGELHSGYVVGGKPCSFDAVVFHSSLFSSGSIDYLFDRYISPVLEKRYEVPAHL 125 Query: 124 --------AFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQW-- 173 L ++ + + E ++ + F ++ +L + V Q Sbjct: 126 RREPGPGMELLAMLDQIFEVHRNEQAASELTIKGLLFSILAKLVSLGKPSVRVKPEQEGY 185 Query: 174 ---LKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFA 230 TV + ++ L+ + L+ S+ Y R +R K+P++ +N R+ A Sbjct: 186 RIERLKTVIEYIEQNYAEPIPLQKLAELARMSESYFCRFFKRITTKSPIEYMNSYRVQQA 245 Query: 231 KKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 +L T+ + ++A + G++S S F F++ TP+ YR +L Sbjct: 246 ASRLRQTDAKIMEVALDVGFNSLSYFNTVFRQRFGCTPREYRSRLQ 291 >UniRef50_UPI0001788255 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788255 Length = 292 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 50/286 (17%), Positives = 100/286 (34%), Gaps = 22/286 (7%) Query: 12 ATAREQQLFNGKNFHV----FIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLE 67 + +E + + F + + + H H E V+ G +I+ + + + Sbjct: 7 QSLKESTVHGNERFPFGAYWYQFAPGAHVVDSHWHKEAEIFYVMEGEVLFQIDSEYIPVR 66 Query: 68 RGDFVFIPLGSHHQSFYE-FGATRILNVGISKRFFEQHYLPLLPYCFVASQVYR------ 120 G+ +FI G H + + L+ + R Sbjct: 67 AGEAIFIDGGDLHTGHAQGNEGCSFCAMVFDVGMLASSSYDLVQEGMIVPFQERRAAFPR 126 Query: 121 -----TNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVIN------RLRHYREEQVIDD 169 T+ L +++ ++ + G E ++ F ++ RL + + D Sbjct: 127 RMTSGTDERLLEHIKEMMLLSKHKPAGYEAAIKGHLFLMLFQAASSGRLANRSRSEAADM 186 Query: 170 VPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINF 229 V L + L S+ R + G+TP+ +N R+ Sbjct: 187 TRTERLKKVILYIQSHYHRPIRLSELADLIPMSEGQFCRFFKSMTGQTPVDYMNSYRVRQ 246 Query: 230 AKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 A + L + ++DIA + G+ S F++ F+K+ + TP YRKKL Sbjct: 247 AAELLRSPDNKISDIALDVGFGHISYFVRVFRKIMNCTPSEYRKKL 292 >UniRef50_B7DQ49 Transcriptional regulator, AraC family n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DQ49_9BACL Length = 344 Score = 229 bits (585), Expect = 9e-59, Method: Composition-based stats. Identities = 59/290 (20%), Positives = 105/290 (36%), Gaps = 26/290 (8%) Query: 16 EQQLFNGKNFHVFIYN------KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 E + FH+ Y+ + LH H EF +V G ++ +R +L G Sbjct: 52 EHRQHGDTTFHIRAYHVVLTPGPYQQTVNLHWHSEAEFIVVTRGSVCLQVGSERHVLADG 111 Query: 70 DFVFIPLGSHHQSFYEF-GATRILNVGISKRFFE---------QHYLPLLPYCFVASQVY 119 D + G H G + + E + PL + Sbjct: 112 DVALLSGGELHSMAAPGKGPSECKAIVFGLDLLEGPSSDRVQQSYLSPLASGKLLLPGAI 171 Query: 120 RTNNAFLTYVE----TVISSLNLRETGLEEFVEMVTFYVINRLRH------YREEQVIDD 169 ++ Y+ ++ +L + G E V+ + V+ +L + + +DD Sbjct: 172 AHDHPVRQYLAARLCEIVEALEEQPVGYELAVKGCLYDVLAQLFRAELLVEHSPRREMDD 231 Query: 170 VPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINF 229 V D + L ++ ++ S+ + R + + PMQ +NE R+ Sbjct: 232 RRADTLKAVLTYIDAHLSDKLRLADLARVANMSEGHFCRFFKEMTHRKPMQYVNERRVAR 291 Query: 230 AKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFN 279 A L+ N S+T I + G+ S FIK F+ TP +YRK L + Sbjct: 292 AADLLKDPNRSITAIGMDLGFHDVSYFIKVFRSYKHCTPLAYRKALLKKP 341 >UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8RPA3_9CLOT Length = 339 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 48/283 (16%), Positives = 91/283 (32%), Gaps = 20/283 (7%) Query: 12 ATAREQQLFNGKNFHVFIYNKTES----ISGLHQHDYYEFTLVLTGRYFQEINGKRVLLE 67 E + G++F IY + +H H+ E V GR ++ + Sbjct: 52 YGYHEIKEHAGRDFPFNIYPCSIPADFRQVPVHWHEDMEIIAVKKGRGVVTVDMEPYEAR 111 Query: 68 RGDFVFIPLGSHHQSFYEFGAT-RILNVGISKRFFEQHYLPLLPYCFVASQVY------- 119 G+ V + G H N+ L Y F+ Sbjct: 112 AGEAVVVFPGQLHGISQCGSEAMEYENIIFLPSMLMSAESDLCTYDFLRPMTEGGIGKPL 171 Query: 120 ------RTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHY--REEQVIDDVP 171 AF+ + + + + V+ F+ + + E Sbjct: 172 HITGGLPDYGAFMECIGILDQLCGKKNYAYQMGVKGTLFWFLGLIAGIWGPEAAGQPRKS 231 Query: 172 QWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAK 231 + + + ++ + +E+ L S + + ++Y G +Q +NE R+ A Sbjct: 232 RERMKRLLEYMEEHYGEKITVEDGAELCFYSNSHFMKYFKQYMGVPFIQYLNEFRLEKAA 291 Query: 232 KQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 L T VT +A G+ + S F + F++ TP YRK Sbjct: 292 GMLLTTPDPVTAVAQRCGFDNISYFNRLFRRKYGKTPGEYRKN 334 >UniRef50_A8S9Z6 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9Z6_9FIRM Length = 285 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 53/281 (18%), Positives = 96/281 (34%), Gaps = 18/281 (6%) Query: 12 ATAREQQLFNGKNFHVFIYNKTE----SISGLHQHDYYEFTLVLTGRYFQEINGKRVLLE 67 A+ +E + F +Y T LH H+ E V G ++ Sbjct: 5 ASLQETKQHGAVRFPFNLYPCTIPGDFQQVALHWHESMELVFVKQGMGLVQVGVVTYPAY 64 Query: 68 RGDFVFIPLGSHHQS-FYEFGATRILNVGISKRFF--------EQHYLPLLPYCFVASQV 118 RGD G+ H E N+ E++ LPL Sbjct: 65 RGDIFIFAPGTLHALRQAEGQRMEYENIIFEPELLGGAEDLCAEKYLLPLQSGRLSLPVR 124 Query: 119 YRTNN----AFLTYVETVISSLNLRETGLEEFVE-MVTFYVINRLRHYREEQVIDDVPQW 173 N+ + + + + G E V+ + ++ + R+ + Sbjct: 125 LTPNDLCYLQAAACLRELEDANRAKRPGYELLVKGALLRFLALLIAQGRQCLSTETADTQ 184 Query: 174 LKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQ 233 TV + + + + + S + R ++ G++ + +NE R+N A + Sbjct: 185 RLKTVLQWLSAHYAEPLRVADAAGVCSFSASHFMRWFRQMTGQSFIAFLNEYRLNTAAEA 244 Query: 234 LEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 L T+ +V IA G+ + S F + FK TP+ YRKK Sbjct: 245 LRTTDETVLTIASRCGFENLSYFNRAFKAHFGMTPRDYRKK 285 >UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dictyoglomus RepID=B5YFJ6_DICT6 Length = 287 Score = 224 bits (571), Expect = 4e-57, Method: Composition-based stats. Identities = 56/286 (19%), Positives = 112/286 (39%), Gaps = 18/286 (6%) Query: 6 INAPEIATAREQQLFNGKNFHVFIYNK----TESISGLHQHDYYEFTLVLTGRYFQEING 61 + + +F +F++ + H H+ +E + G ++G Sbjct: 1 MRVRKKELIESDVSHGTPDFPLFVHEDIFVYRNGVVNPHWHNEFEILYMERGIGKFYVDG 60 Query: 62 KRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFF---------EQHYLPLLPYC 112 L G+++F+ GS H + + R +++LPL+ Sbjct: 61 YEYKLNEGEYLFVNSGSIHSGLEMIKRSIGYAIVFDLRLLYSEEPDYCKHEYFLPLINKR 120 Query: 113 FVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDD--- 169 + + + +I + G E +++ + F + R+ Y E+ D Sbjct: 121 YHIPSNL-NDEHIRNDICRIIEVFKEKSYGYELYIKSLLFDIFWRVFKYYAERRNQDGRL 179 Query: 170 -VPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRIN 228 V ++ +L+ + S+ YL R + +P++ IN++R++ Sbjct: 180 GYKIERIKDVLNYINQNYNKNLSLDELSRQVDMSKFYLCRLFKESLRMSPVEYINKVRVD 239 Query: 229 FAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 A + L T+ SV++IAFE G+ + S FIK FKK TP +RK+ Sbjct: 240 KAMELLINTDMSVSEIAFECGFDNISYFIKVFKKYMHTTPLKFRKQ 285 >UniRef50_C6IZN9 AraC family transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZN9_9BACL Length = 301 Score = 223 bits (568), Expect = 8e-57, Method: Composition-based stats. Identities = 54/289 (18%), Positives = 99/289 (34%), Gaps = 25/289 (8%) Query: 13 TAREQQLFNGKNFHV----FIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLER 68 + +E + + + Y E + H HD EF L G +++ + Sbjct: 8 SLKESKSHGNERQPFGTYWYRYGPGEHVIDCHWHDEAEFFYCLEGETLFQVDTDYFPVGA 67 Query: 69 GDFVFIPLGSHHQSFYE-FGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRT------ 121 G+ VFI G H + ++ + + + V R Sbjct: 68 GEAVFIDGGDIHAAHAHGDQGCAFFSLVFDTQLLASAHYDAVQENLVLPLQERKATFPRH 127 Query: 122 -------NNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRL-------RHYREEQVI 167 + + L ++ ++ S + G E V+ F ++ + Sbjct: 128 IRRETAADLSLLEHIVALMRSCSTESPGYEGAVKGHLFLMLAEIAATGRAVNRSHSSSRS 187 Query: 168 DDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRI 227 + TV + L + AL S+ R + +TPM IN RI Sbjct: 188 ESSKIDRLKTVIQHIQHNYSHPIRLAELAALIPMSEGQFCRFFKSMTRQTPMDYINSYRI 247 Query: 228 NFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 A + L ++DIA E G+ + S FI+ F+K + +P +RK+L Sbjct: 248 RQAAELLREPERKISDIALEVGFDNISYFIRVFRKAMNCSPSEFRKRLQ 296 >UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIK0_9FIRM Length = 615 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 46/243 (18%), Positives = 104/243 (42%), Gaps = 8/243 (3%) Query: 33 TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG-ATRI 91 +++ H H+++E + GR I + +L+ +F+ P H SF E R Sbjct: 24 NDNMVRSHYHEFFEIYYLEQGRRQHIIEDSQYILQPDEFIIFPPFVMHHSFEENDVPFRR 83 Query: 92 LNVGISKRFFEQHYLPLLPYCFVASQVYR----TNNAFLTYVETVISSLNLRETGLEEFV 147 L + + +L ++VY+ + ++ ++ + E + Sbjct: 84 LLLYFNPEVIRS--PQILRTLSERARVYKLPRAQSAPIYNLMKDILQEQERDDLYSRELI 141 Query: 148 EMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLT 207 ++ + +L +E + + + +H+ + LE + SQ +L Sbjct: 142 TLMVNALALQLVRNSDEAARPEQRNRVTDIINYLHE-HFTEDITLEQLANHFYVSQYHLC 200 Query: 208 RATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFT 267 R +RY T +Q I+ +R+ A++ L+ ++YS+T+I+ G+S+ + F + +K +T + Sbjct: 201 REFKRYTSSTIVQYIHNLRVLHAQRLLQESDYSITEISKRVGFSNVTHFNRVYKSVTGMS 260 Query: 268 PKS 270 P Sbjct: 261 PSQ 263 >UniRef50_C5RE92 Transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=C5RE92_CLOCL Length = 286 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 56/279 (20%), Positives = 111/279 (39%), Gaps = 16/279 (5%) Query: 13 TAREQQLFNGKNFHVFIYNKTESI----SGLHQHDYYEFTLVLTGRYFQEINGKRVLLER 68 +E + +F + Y+ + S H H YE +++G + +NG + L+ Sbjct: 5 DYKENRQHGTFDFPIAFYHVSPSHPRYNMPYHWHTEYEIIRIISGEFLLTLNGNELKLKT 64 Query: 69 GDFVFIPLGSHHQSFYEFGATRILNVGIS-----KRFFEQHYLPLLPYCFVASQVYRTNN 123 GD FI G H + + + ++ V + + T+N Sbjct: 65 GDLAFIHAGILHGGTPIDCVYECIVFDMKSLLKVNSTCSKQIQDIIHNSKVINSLLPTDN 124 Query: 124 -AFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM- 181 T + S+ ++ G E + ++++ + +R + + + + Sbjct: 125 LELQTVCNYLFESMAQKKLGYELVTQGSLYHLLGIILEHRLYSTPKEATSKNQQRINQFK 184 Query: 182 -----HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEM 236 +++ LE++ + + +Y R + ++P+ +N RI + +QL Sbjct: 185 NVLSLIEQQYPDPLTLEDLSKAAGMTPKYFCRFFRGMTQRSPIDYLNYYRIESSCEQLVS 244 Query: 237 TNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 TN S+T+IA G++ S FIKTFKK TPK Y K Sbjct: 245 TNESITEIALNCGFNDISYFIKTFKKYKGVTPKQYLKDY 283 >UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJ70_CALS8 Length = 286 Score = 221 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 60/278 (21%), Positives = 109/278 (39%), Gaps = 16/278 (5%) Query: 14 AREQQLFNGKNFHVFIYNKT----ESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 +E+ F + +Y K + H HD +E + G ++GK L Sbjct: 7 LKEKVQHGSAVFPINVYEKIFVHENNTLLPHWHDEFEIVYLEKGTASFRVDGKEYFLGPK 66 Query: 70 DFVFIPLGSHHQSFYEFGATRI-----LNVGIS--KRFFEQHYLPLLPYCFVASQVYRTN 122 F+F+ GS H E L++ S + YL + + Q + Sbjct: 67 QFLFVNCGSIHGGKAEDNPEPYAIVFSLSMLFSEGPDICKSKYLQSVSERKLLVQNSFED 126 Query: 123 NAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRL--RHYREEQVIDDVPQWLKSTVE- 179 + +I+ + G E V+ F + L + Y D ++ Sbjct: 127 EHTRELISNIITVWKEKPKGYELLVKGYLFVIFYYLFNKRYVTASSTDRELDLKLEKIKS 186 Query: 180 --KMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMT 237 + S+ ++ + L+ S+ Y R + TP+ IN+ R+ A + ++ T Sbjct: 187 ALDFINSNYSSDIDIDLLAKLANLSKFYFCRLFKEITHLTPVDYINKFRVEKAIELIKNT 246 Query: 238 NYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 N S+++IAFE G+++ S FIK FK+ TP Y+K + Sbjct: 247 NLSISEIAFEVGFNNVSYFIKVFKEYVGVTPFKYKKNV 284 >UniRef50_C6LDM6 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LDM6_9FIRM Length = 298 Score = 219 bits (560), Expect = 6e-56, Method: Composition-based stats. Identities = 53/293 (18%), Positives = 101/293 (34%), Gaps = 21/293 (7%) Query: 2 MQPVINAP-EIATAREQQLFNGKNFHVFIYNKTES-ISGLHQHDYYEFTLVLTGRYFQEI 59 M + ++ A +E + F YN + H H+ YE + V G Sbjct: 1 MTSIFHSDAVNANGQELKQHGTGLFPCGCYNASPEVQVPWHWHEEYECSYVFHGAVTYHT 60 Query: 60 NGKRVLLERGDFVFIPLGSHHQSFYEFGAT----------RILNVGISKRFFEQHYLPLL 109 L GD +F+ G+ H + R++ ++++ PL Sbjct: 61 PQGEFRLGEGDGIFLNSGTLHTVEVAPAGSLKKSDLVFHGRLIYGSRDSVLYQKYVQPLS 120 Query: 110 PYCFVASQVYR----TNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYRE-- 163 + + R + L+ ++ + G E V + + L YR Sbjct: 121 APDAFQTLILRRTVSWHAEILSRIKKAVRLCQNEPEGYEFTVRSLLSEIFFDLYCYRNAP 180 Query: 164 ---EQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQ 220 + + + + + A + + R Q+ +P+Q Sbjct: 181 AAETSAATASENARIKQMLRYLQENYTRRVTVAELAAHANICERECLRCFQKVLHLSPIQ 240 Query: 221 IINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 + RI + L ++ SV +I+ G+ SPS F KTF+++T TP YR+ Sbjct: 241 YLIRYRIARSCILLRESDLSVLEISNLCGFESPSYFTKTFRQITGGTPTQYRR 293 >UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ERJ9_9FIRM Length = 294 Score = 219 bits (559), Expect = 8e-56, Method: Composition-based stats. Identities = 49/293 (16%), Positives = 100/293 (34%), Gaps = 21/293 (7%) Query: 1 MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTE----SISGLHQHDYYEFTLVLTGRYF 56 M ++ + E ++ +F Y + LH HD E ++ G Sbjct: 1 MQNIEMDKLQYKIYHENKIHTPDDFPYNTYLCSIPLDFQSVNLHWHDEVEIIVIKKGSGI 60 Query: 57 QEINGKRVLLERGDFVFIPLGSHHQSFYEFGAT-RILNVGISKRFFEQHYLPLLPYCFVA 115 ++ + GD +F+ G H + N+ + L F+ Sbjct: 61 VSVDLTTYSVSAGDIIFVLPGQLHAISQKDNEIMEYENILFKSSLLKSSGYDLCNDKFIQ 120 Query: 116 SQVY-------------RTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYR 162 +T + + +LR + ++ F ++ L Sbjct: 121 PLFSGSLNICPVINNQTPYYPPVITAINEIDHLCDLRPYAYQLSIKAHLFQILYTLVSNC 180 Query: 163 EEQVIDDVPQWLKSTVE---KMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPM 219 + I + Q ++ A+E++ S+ Y + + G + + Sbjct: 181 GQNKIKPINQKSLKKIKTILSYIANNFQENIAIEDIANYCFYSKSYFMKFFKETMGVSFI 240 Query: 220 QIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 Q +N+ R+ A + L T ++ DIAF G+++ S F + FKK +P+ YR Sbjct: 241 QYLNDYRLEIAAELLTTTTDNILDIAFATGFNNISYFNRCFKKKYGVSPRKYR 293 >UniRef50_A8SCU0 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SCU0_9FIRM Length = 310 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 60/283 (21%), Positives = 106/283 (37%), Gaps = 19/283 (6%) Query: 12 ATAREQQLFNGKNFHVFIYNKTESISG--LHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 A REQ F + Y + S H H+ +EF L G ++N R+ L+ G Sbjct: 27 AAGREQTQHGSPLFPIACYAEDLSCFSVAWHWHEEFEFILAALGPIHVDVNKTRLTLQTG 86 Query: 70 DFVFIPLGSHHQSFYEFGATRILNVGISKR--------FFEQHYLPLL----PYCFVASQ 117 VFI G+ H G + + R F+++ PLL P F+ + Sbjct: 87 QGVFINSGALHAVEPAEGRALLHSGVFQPRLVGGMDTVFWQKLIRPLLQPGTPPFFLLDE 146 Query: 118 VYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYR-----EEQVIDDVPQ 172 L + + E V + L + + + Sbjct: 147 AVPWQRQVLLCLREAWKGVADEPFDYENRVRYHLTAALRLLITQCVSGKVKVSEQEQIAS 206 Query: 173 WLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKK 232 + + ++ E +E + A S+ R+ +++ G TP+Q + + R+ A + Sbjct: 207 ERMKQMLRYVEEHYAEELTVEKLAGCVALSESACLRSFRQFLGITPIQYVKQFRVEKAAE 266 Query: 233 QLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 L T ++ E G+S S FIKTF+++ TP+ YR + Sbjct: 267 LLRSTRLKTGEVGLECGFSDASYFIKTFREIKHCTPREYRIRF 309 >UniRef50_C6LDG4 Transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=C6LDG4_9FIRM Length = 369 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 59/285 (20%), Positives = 100/285 (35%), Gaps = 19/285 (6%) Query: 7 NAPEIATAREQQLFNGKNFHVFIYNKTES----ISGLHQHDYYEFTLVLTGRYFQEINGK 62 E+ + +E + F IY T LH H E V G + Sbjct: 84 RKKELESFQETKKHGSTMFPFNIYPCTIPGDFPSVALHWHKSMEIIFVKKGTGRIQTGRN 143 Query: 63 RVLLERGDFVFIPLGSHHQSFYEFG-ATRILNVGISKRFF---------EQHYLPLLPYC 112 GD +P G+ H + G N+ F +++ +PL Sbjct: 144 MQEARSGDIFVMPPGTLHAIYAAAGYNMEYENIIFEVEFLGGGAADVCDKEYLVPLASGQ 203 Query: 113 FVASQVYRT----NNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVID 168 + V+ + + RE G E V+ ++ L E Sbjct: 204 LLQPAVFSPVDAGYKQISACLRRAEELCSARERGYELGVKAALLELLLYLLRMCPEAPER 263 Query: 169 DVPQ-WLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRI 227 D P V + +++ + +M A+ S + R +R G +P+ +NE R+ Sbjct: 264 DTPDMERLKRVLQRIEQDYAKPLTVPDMAAVCGCSSSHFMRWFKRMTGTSPLAYLNERRL 323 Query: 228 NFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 A + L T+ + IA AG+ + S F + FKK TP++YR Sbjct: 324 AAAAENLRETDDKILVIAENAGFENLSNFNRQFKKRYGVTPRAYR 368 >UniRef50_C9LA22 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C9LA22_RUMHA Length = 277 Score = 218 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 60/247 (24%), Positives = 112/247 (45%), Gaps = 5/247 (2%) Query: 32 KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG-ATR 90 + S H H + E V G + +I GK++ +++ D + I H F Sbjct: 29 DKDWHSMEHSHYFSELFFVTKGTGYFQIEGKQIPVQKNDLILINPNIPHTEFGNKEQPWE 88 Query: 91 ILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMV 150 + +GI F Q+ PY + + R + Y+ T++ + ++ G + + + Sbjct: 89 YIALGIEGVQF-QYSEKEAPYSYSVFSLSREHREIPWYLSTLVKEIQTQQEGYQTICQNL 147 Query: 151 TFYVINRLRHYREEQVID---DVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLT 207 ++ + ++ + VE+ ++ + L+ + AL ++ YL Sbjct: 148 LELILLSVARSTRQEFLSAPRQKTTRECRLVEQYINEHYHEDITLDTLSALVHINKYYLV 207 Query: 208 RATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFT 267 A + Y G +P+ + + R+ A+ LE TNYSVT I +G+SS S F +TF++LT T Sbjct: 208 HAFKNYKGVSPINYLIQRRVEEARYLLESTNYSVTKIGEISGFSSQSYFSQTFRRLTGTT 267 Query: 268 PKSYRKK 274 P +YRKK Sbjct: 268 PNAYRKK 274 >UniRef50_C8WV57 Transcriptional regulator, AraC family n=2 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius RepID=C8WV57_ALIAD Length = 300 Score = 217 bits (554), Expect = 3e-55, Method: Composition-based stats. Identities = 56/284 (19%), Positives = 100/284 (35%), Gaps = 26/284 (9%) Query: 16 EQQLFNGKNFHVFIYNKT------ESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 E + FH+ Y+ + LH H EF +V G ++ +R +L G Sbjct: 8 EHRQHGDATFHIQAYHVVLTPGPHQQTVNLHWHSEAEFIVVTRGSVCLQVGSQRHVLADG 67 Query: 70 DFVFIPLGSHHQSFYEF-GATRILNVGISKRFFE---------QHYLPLLPYCFVASQVY 119 + G H G + + E + PL Sbjct: 68 GVALLSGGELHSMASPGKGPSECKAIVFGLDLLEGPSGDRVQQSYLSPLASGKLRLPGAI 127 Query: 120 RTNNAFLTYVE----TVISSLNLRETGLEEFVEMVTFYVINRLRH------YREEQVIDD 169 ++ ++ + +L + G E V+ + V+ +L + +DD Sbjct: 128 AHDHPVRPHLAARLCEIAEALEEQPVGYELAVKGCLYDVLAQLFRAKLLVEDSPRREMDD 187 Query: 170 VPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINF 229 V D+ + L ++ ++ S+ + R + + PMQ +NE R+ Sbjct: 188 RRADTLKAVLTYIDEHLSDKLRLADLARVANMSEGHFCRFFKEMTHRKPMQYVNERRVAR 247 Query: 230 AKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 A L+ N S+T I + G+ S FIK F+ TP +YRK Sbjct: 248 AADLLKDPNRSITAIGMDLGFHDVSYFIKVFRSYKHCTPLAYRK 291 >UniRef50_B0MH78 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MH78_9FIRM Length = 307 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 54/301 (17%), Positives = 100/301 (33%), Gaps = 24/301 (7%) Query: 1 MMQPVINAPEIATAREQQLFNGKNFHVFIYN-----KTESISGLHQHDYYEFTLVLTGRY 55 M RE F Y+ + H H+ E + +G Sbjct: 1 MSLQECTVSTDQDRREVCPHGTIEFPCAGYDSVYSSHAINRIPWHWHEELEVIFLPSGTL 60 Query: 56 FQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKR---------FFEQHYL 106 + GKR + GD + I H++ R+ ++ F++++ Sbjct: 61 DVRVPGKRFRMNAGDCLVINSNILHEAETSNE-CRLHSLVFHTDLISGSDSSVFYKKYMY 119 Query: 107 PLLPYCFVASQVYRTNN----AFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYR 162 PL+ C + ++ + + +L G E V + L + Sbjct: 120 PLISSCTLDCVLFSAEDTSGVSIRQCFMMAFDALANNREGYEFTVRECLSRLCFLLCTFY 179 Query: 163 EEQVID-----DVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKT 217 + ++ D D + + M L ++ + + R R G + Sbjct: 180 KPEISDTSAKPDQDSFRIKEMIHMIQSRYAEPLKLCDIAQAANIGERECLRCFHRTLGIS 239 Query: 218 PMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 PMQ + R++ L TN S+ +I+ G+ SPS F TFK+ +P+ YRK Sbjct: 240 PMQYLIRYRLSKGALLLINTNKSIAEISTRCGFDSPSNFSLTFKRKYQCSPREYRKNNKT 299 Query: 278 F 278 Sbjct: 300 L 300 >UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C353D2 Length = 286 Score = 216 bits (552), Expect = 5e-55, Method: Composition-based stats. Identities = 49/278 (17%), Positives = 91/278 (32%), Gaps = 20/278 (7%) Query: 14 AREQQLFNGKNFHVFIYNKTESI----SGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 +E + +F Y+ TES H H+ E +++G + IN G Sbjct: 6 YKEIKHHGTADFPAGYYHVTESHPQYAMPYHWHEELELIHIISGTFHVTINETTRNAVPG 65 Query: 70 DFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQ------HYLPLLPYCFVASQVYR--T 121 D + + G H + L + + + Sbjct: 66 DILLVNSGGLHGGT--PYDCVYECLVFPVSLLSSQTYASEFLNRLDRQDLILDEYFPAGD 123 Query: 122 NNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDV------PQWLK 175 + A + +E + + + + G + + + + L R D +L Sbjct: 124 DTAIHSLLERLFALMQDSDEGGKLQCLGLLYQFMGLLLQDRRYTASDKSDLSTHRNIYLL 183 Query: 176 STVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLE 235 V + + L + + S +Y G+TP+ +N R+ A L Sbjct: 184 KNVLNYIEAHYTEKITLHELARTAGMSSKYFCHFFSEMTGRTPIDYVNYYRVERACCLLA 243 Query: 236 MTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 +S+TDIA G++ S F + FKK +P Y K Sbjct: 244 GIGHSITDIAMLCGFNDVSYFTRAFKKYKGISPGQYLK 281 >UniRef50_A5N4U3 Predicted transcriptional regulator n=2 Tax=Clostridium kluyveri RepID=A5N4U3_CLOK5 Length = 298 Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 57/297 (19%), Positives = 107/297 (36%), Gaps = 20/297 (6%) Query: 1 MMQPVINAPEIATAREQQLFNGKNFHVFIYNKT--ESISGLHQHDYYEFTLVLTGRYFQE 58 M N ++ E Q F + Y + H H+ +E V++G Sbjct: 1 MSIAKCNVTVNSSGEEVQKHGTSEFPIAFYEENLSSYSIPWHWHEDFEIIWVISGSIKVS 60 Query: 59 INGKRVLLERGDFVFIPLGSHHQSFYEFGATRIL-NVGISKR--------FFEQHYLPLL 109 +N +L + +FI G H +L ++ R +++ + P++ Sbjct: 61 VNSTEHILNKNQGIFINAGFLHSIHATNDGEYVLRSIVFHPRLIGSIDSIYWQNYIEPII 120 Query: 110 PY----CFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYR--- 162 + + L Y +V + L E G E +V +I + Sbjct: 121 QNKNLPYILLDPFINWQDKILAYSISVWNRLYNTENGFEIYVRNELSQLILIVLTNHSIC 180 Query: 163 --EEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQ 220 + + + T+ + + + ++ S+ + R R TP Q Sbjct: 181 EAKPSIRNLRNADRIKTMLQYIQMHFSETITISTLARVALISESEVLRCFHRTIHSTPNQ 240 Query: 221 IINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 + + RI A + L T+ + DIAF+ G+ S S F KTF++ TP YRK+ + Sbjct: 241 YLKQYRIQKACQMLIDTDMTSIDIAFQCGFQSSSYFTKTFREQIGCTPLEYRKRDQQ 297 >UniRef50_UPI0001789C32 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C32 Length = 297 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 44/292 (15%), Positives = 104/292 (35%), Gaps = 24/292 (8%) Query: 8 APEIATAREQQLFNGKNFHVFIYN---KTESISGLHQHDYYEFTLVLTGRYFQEINGKRV 64 ++ ++F +++ + + LH HD E + G I + V Sbjct: 1 MTNPYQIKQDVPHRDQDFPFDVFHIIPPGKEVLHLHWHDDLELIYFIRGNATFYIGSETV 60 Query: 65 LLERGDFVFIPLGSHHQSFYEFGA-TRILNVGISKRFFEQHYL---------PLLPYCFV 114 E GD +F+ G H F + + E P Sbjct: 61 KPEPGDLMFVNKGMIHTGFADDEHQVEYYALVFHSVLAESRVAGSSHVQITNPYASGKRF 120 Query: 115 ASQVYRTNNAFLTYV----ETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDV 170 + +A+ + + + +I+ + G + ++ + ++ L + Sbjct: 121 FPILLPVTDAYNSLIAGIVKQMIAEYEQQAIGYQVAIQSMLHLLLVHLSRHHHLHGPTGS 180 Query: 171 PQ-------WLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIIN 223 + ++ + ++ + S+ + R ++ GKT ++ +N Sbjct: 181 ADTVGAELTDRFKELIAFVERHYPEKLTVQQAAGIVNLSEYHFCRTFKKVTGKTFVEYVN 240 Query: 224 EIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 +RIN A++ L ++ +T+IAF+ G+ S + F + F++ +P RK+ Sbjct: 241 LLRINAAEQLLIHSSDPITEIAFKVGFGSVNYFSQMFRQYKRHSPSQCRKRY 292 >UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MKI2_9FIRM Length = 284 Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats. Identities = 58/281 (20%), Positives = 103/281 (36%), Gaps = 19/281 (6%) Query: 13 TAREQQLFNGKNFHVFIYNKTESISG----LHQHDYYEFTLVLTGRYFQEINGKRVLLER 68 RE++ + F Y TE+ H H+ E V +G + ++G ++ Sbjct: 5 EYREKREHGTREFPYACYRVTENFPRYNMIPHWHNECEIIYVRSGYFELFLDGHTHRIDA 64 Query: 69 GDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQ-------HYLPLLPYCFVASQVYRT 121 G I GS H R + + H P++ + + Sbjct: 65 GCCSLIIGGSMHGG-TPKDNCRYDCLVFDMAALLKSSQICTLHLQPIINHERRFITFFSA 123 Query: 122 NNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRL------RHYREEQVIDDVPQWLK 175 ++ + VI ++ +E G E V ++ + E D Sbjct: 124 DSEPAKDAKAVIDAMLEKEPGYEFTVPGRLLCMLGHIVARQEHYQSGETAASDIKKVRRF 183 Query: 176 STVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLE 235 V ++ LE + ++ Y RA + Y GKTP++ +N RI A + + Sbjct: 184 KNVISYIEQNYRKNITLEELANECGMNRNYFCRAFKEYTGKTPVEYLNYFRIESACELIA 243 Query: 236 MTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSY-RKKL 275 T+ + DIA + G++ S FIK FK + TP+ Y R+ Sbjct: 244 STDEKLIDIAMKCGFNDYSYFIKVFKSMKGVTPRDYCRRSF 284 >UniRef50_B1R0P6 Transcriptional regulator, AraC family protein n=2 Tax=Clostridium butyricum RepID=B1R0P6_CLOBU Length = 297 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 58/295 (19%), Positives = 102/295 (34%), Gaps = 21/295 (7%) Query: 1 MMQPVINAPEIATAREQQLFNGKNFHVFIYNKT--ESISGLHQHDYYEFTLVLTGRYFQE 58 M + N RE F V Y+ + H HD +E +V G Sbjct: 1 MALSLCNTTTNEHGRELVEHGTVLFPVACYDDDLIKKSVPWHWHDEFEAVIVSEGTALIA 60 Query: 59 INGKRVLLERGDFVFIPLGSHHQSFYEFGA-TRILNVGISKR---------FFEQHYLPL 108 K+ L++G+ +FI G H ++ + + + ++ R F+ + PL Sbjct: 61 AGTKKYTLKQGEGIFINAGILHAAWSKNCSICHLHSITFHPRLIGGSIDSIFWHNYVQPL 120 Query: 109 LPY----CFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHY--- 161 L + +E+ +S G E V +I L Y Sbjct: 121 LTNPIVKHIHLDSSEAWHKEATHAIESAWNSCANEPFGYEFQVHSSLSQLILHLSAYHPV 180 Query: 162 --REEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPM 219 R+ + + + + + + S+ R + G P+ Sbjct: 181 ISRQPSEKVLRNSNRLKLMLQFIQDHYHDQINVSMIADTAMISESECLRCFRNIIGIPPI 240 Query: 220 QIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 Q + + RI A + L TN ++T I + G+ S F+KTF++ TP YRK Sbjct: 241 QYLKQFRIQKAVEFLTSTNETITKIGAKCGFQDTSYFVKTFREQKKCTPSEYRKN 295 >UniRef50_Q9KBM0 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus halodurans RepID=Q9KBM0_BACHD Length = 299 Score = 214 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 52/280 (18%), Positives = 102/280 (36%), Gaps = 22/280 (7%) Query: 16 EQQLFNGKNFHVFIYN----KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDF 71 E + F +Y + I H H E+ + G +I K + G+ Sbjct: 8 EARAHGDPMFPCNVYRVKEVNGQVIIHCHWHHEMEWIYMEAGEAEFQIGTKMTTVRAGEG 67 Query: 72 VFIPLGSHHQSFY-EFGATRILNVGISKRFFEQHYLPLLPYCFVAS-------------Q 117 +FIP G H ++ + + F L+ ++ Sbjct: 68 LFIPSGHLHGAYPVSDKPFSLYATVVHPDFISSFGYDLIQSRYIDPFKDSERTGPIKLCP 127 Query: 118 VYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLR----HYREEQVIDDVPQW 173 + + LT ++ IS +E G E ++ ++ L E++ Sbjct: 128 THYWMSDMLTMLQATISQFQQKEEGYELVIKANLLQMMAELVKHFPRTEEQKTGTPQQIR 187 Query: 174 LKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQ 233 V + D+ + ++ + L S+ + +R + T ++ I+ R+N A + Sbjct: 188 QIKKVLQFIDEHYDEKLTIKQLANLVQMSEGHFSRFFKSIVRMTAVEYIHTQRLNKAARL 247 Query: 234 LEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 L T+ ++ DI+ G+ PS FIK FK+ TP +R+ Sbjct: 248 LRETDRTIMDISMSVGFDHPSYFIKLFKRHKRCTPSEFRR 287 >UniRef50_C0C2H5 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2H5_9CLOT Length = 300 Score = 214 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 51/299 (17%), Positives = 97/299 (32%), Gaps = 28/299 (9%) Query: 4 PVINAPEIATAREQQLFNGKNFHVFIYNKTESISGL-----HQHDYYEFTLVLTGRYFQE 58 + E F ++ T S H H E +L G + Sbjct: 1 MIREIITDKNMLELNPHGNYGFPFYLIYVTLSAYQFGRFNCHWHPELEIACILEGTMTYQ 60 Query: 59 INGKRVLLERGDFVFIPLGSHHQ-SFYEFGATRILNVGISKRFF---------EQHYLPL 108 +N L +GD +F+ + H +E + + + + PL Sbjct: 61 VNQNLYQLGKGDCLFVNSNALHSGCMFENNDCKYIVATFNPSLIYGYEKSDIDTNYTFPL 120 Query: 109 LPYCFVASQVYRT----NNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREE 164 L S V+R N F ++ + + E ++ + L + Sbjct: 121 LNTDNFTSFVFRDGADGNETFQKIMKEMAAFYTEENACYELHIKSRLCELWALLFEEFQR 180 Query: 165 QVID--------DVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGK 216 + LK+ + +H L+ M S+ R ++ + Sbjct: 181 SQLPSGAGLAEAKQISRLKNAIIFIHSS-YTDPITLDQMAESCHTSKSEFCRIFKKTLHQ 239 Query: 217 TPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 TP + + RI + L S+T+IA + G+S S + + F+K +P+ Y+K L Sbjct: 240 TPFEYLLRYRIQKSLPLLVTDTCSITEIASQVGFSGSSYYSEVFRKYMGCSPREYKKNL 298 >UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5Z9N2_9FIRM Length = 293 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 48/289 (16%), Positives = 98/289 (33%), Gaps = 21/289 (7%) Query: 6 INAPEIATAREQQLFNGKNFHVFIYNKTE----SISGLHQHDYYEFTLVLTGRYFQEING 61 + + E + +F Y + LH H+ E ++ G+ +N Sbjct: 1 MEKNQYEIYHENKKHTPNDFPYNTYLCSIPLDFKSVNLHWHNEVELIVIKKGQGLVNVNL 60 Query: 62 KRVLLERGDFVFIPLGSHHQSFYEFGAT-RILNVGISKRFFEQHYLPLLPYCFV------ 114 + GD VF+ G H + + N+ + L F+ Sbjct: 61 VTYTVNAGDVVFVFPGQLHSISQKDYSIMEYENILFKSSLLKSSGYDLCNDKFIQPLLSG 120 Query: 115 -------ASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHY---REE 164 + + +++ + + + + R + V+ F + L + Sbjct: 121 NLNIYPVINSNFDFHDSLYSLINEIDKLCDKRPYAYQLAVKSYLFQIFYLLISNCGLNQI 180 Query: 165 QVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINE 224 + I T+ + ++E + S+ Y + + G + +Q +N+ Sbjct: 181 KPISKKALEKIKTILSYVAEHFQDNISIEEIAGHCFYSKSYFMKFFKETMGMSFVQYLND 240 Query: 225 IRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 R+ A K L T+ + +IA G+ + S F + FKK TP YRK Sbjct: 241 YRLEVAAKLLTTTSDDIINIAINTGFDNLSYFNRCFKKKYGITPGKYRK 289 >UniRef50_A8SQD4 Putative uncharacterized protein n=2 Tax=Coprococcus RepID=A8SQD4_9FIRM Length = 300 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 51/281 (18%), Positives = 93/281 (33%), Gaps = 17/281 (6%) Query: 10 EIATAREQQLFNGKNFHVFIYNKT----ESISGLHQHDYYEFTLVLTGRYFQEINGKRVL 65 A +E + + Y+ +H HD E V G EI+G++ Sbjct: 1 MYAELKENHPHGTREYPFCEYHMRYFPHAFQIPVHWHDEMEIIYVRKGPLTVEIDGQKFT 60 Query: 66 LERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNN-- 123 E G G H F L T Sbjct: 61 GEDGSVFIASPGVLHMMSAPDTPVDYFTFIFPLEFISFQTKDALEDEVFFPLRNHTRGFR 120 Query: 124 ----------AFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYRE-EQVIDDVPQ 172 + ++ ++ T + V + +++ L Y + E++ + Sbjct: 121 PEVADRKLLGKLIPILDELVEENGKMGTHRQIQVRIRLLQMMDLLVEYSQLEELTRNASG 180 Query: 173 WLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKK 232 L+ + L + S++Y++R + T Q +N +R+ +A+ Sbjct: 181 ELEKEILLYIQDNYHDNIGLAELSEHFHLSEKYMSRLFSERFHMTLTQYVNYVRLRYARH 240 Query: 233 QLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 LE T+ SVT+IA ++GY + S FI+ F +P YR Sbjct: 241 LLESTDLSVTEIAMKSGYQNVSYFIRRFSSAMGESPLRYRN 281 >UniRef50_C6D3A6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3A6_PAESJ Length = 291 Score = 213 bits (543), Expect = 6e-54, Method: Composition-based stats. Identities = 52/287 (18%), Positives = 97/287 (33%), Gaps = 23/287 (8%) Query: 10 EIATAREQQLFNGKNFHVFIYNKTESI---SGLHQHDYYEFTLVLTGRYFQEINGKRVLL 66 + E + + +++ T I LH H+++E V +G I G+ Sbjct: 1 MRSDLWENTVMTDPALPINVFHPTFGIGCSLPLHWHEHFELIYVESGEVLYTIGGQPFPT 60 Query: 67 ERGDFVFIPLGSHHQSFY--EFGATRILNVGISKRFFE-------QHYLPLLPYCFVASQ 117 + GD +F+ G H + + + + P + + Sbjct: 61 KPGDMLFVNSGELHSAASLNPNEPFTVYALVFNPSILGLKEPHIVDLVAPYTNGMSMIAS 120 Query: 118 VYRTNNAFLTYVET----VISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVP-- 171 ++ ++ + + G E V + L D Sbjct: 121 RIEQTDSLYPLLKQTTLRLAGEFEQKPRGYELAVRSYCQLLFTWLSREFTVMQRSDTEMN 180 Query: 172 -----QWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIR 226 + + + +E + S + R ++ G+T +Q +N R Sbjct: 181 AFRARTNRFKELLTRLESDVAERVTVEQAASFVHMSPYHFCRMFKKITGQTFVQYMNLNR 240 Query: 227 INFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 IN A+ L+ T SVTDIA E G SS + F K F++L +P+ RK Sbjct: 241 INRAEYLLKNTAMSVTDIAAEIGCSSINSFSKLFRQLRGVSPRDLRK 287 >UniRef50_A6LYY5 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LYY5_CLOB8 Length = 297 Score = 213 bits (543), Expect = 6e-54, Method: Composition-based stats. Identities = 56/292 (19%), Positives = 103/292 (35%), Gaps = 22/292 (7%) Query: 5 VINAPEIATAREQQLFNGKNFHVFIYNKTESISG-----LHQHDYYEFTLVLTGRYFQEI 59 ++ + E +N +F + S H H +EF L+L G+ + Sbjct: 1 MLKMTLLNDNSEVVSYNFADFPIRAKKSLLSDYPTMAAANHWHTDWEFILLLNGKMSYSV 60 Query: 60 NGKRVLLERGDFVFIPLGSHHQSFYEFG-ATRILNVGISKRFF-------EQHYLPLLPY 111 NGK L+ G +FI H + G + + E + LP+ Sbjct: 61 NGKSYELQEGQAIFINSEQMHYGYSADGSDCNFICILFPPSLISSITRIKETYILPVCED 120 Query: 112 ----CFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYRE---- 163 F+ + ++ V N + G E V + + L + + Sbjct: 121 TSNPFFILHPEITWQRNLIELLKNVYELCNEEKDGFELHVMSLFNTICFSLYNNIKDSIS 180 Query: 164 -EQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQII 222 ++ DD + K L + A + + KTP+ + Sbjct: 181 IQETADDKKLEAMHNMTGYIQKNYQKRITLNEIAAAGNVCRSSCCDIFKLILNKTPVSYL 240 Query: 223 NEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 E R+ + + L++++ SVT+IA + G++ S F + F K TP YR+K Sbjct: 241 TEYRLEKSIELLKISSLSVTEIALQCGFTGSSYFTEIFHKTLGCTPSQYRRK 292 >UniRef50_C7H4U6 Transcriptional regulator, AraC family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4U6_9FIRM Length = 332 Score = 212 bits (542), Expect = 7e-54, Method: Composition-based stats. Identities = 59/284 (20%), Positives = 105/284 (36%), Gaps = 20/284 (7%) Query: 12 ATAREQQLFNGKNFHVFIY--NKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 A RE F + Y N H H+ +E+ L + G ++N RV L+ Sbjct: 48 AEGREMVQHGSALFPIACYAENLKSYSVAWHWHEEFEYILAMKGPLTVDVNKTRVTLQTN 107 Query: 70 DFVFIPLGSHHQSFYEFGATRIL---------NVGISKRFFEQHYLPLL----PYCFVAS 116 VF+ G H +L G+ F+++ P+L P F+ Sbjct: 108 QGVFLNSGILHAVEQAEKGEALLHSGVFHPRLVGGMDTIFWQKLIRPMLQPDAPAFFLLD 167 Query: 117 QVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHY-----REEQVIDDVP 171 + L + ++ + E V + L + + + Sbjct: 168 EAVPWQAQVLACLREAWQAVAVEPFDYENRVRYYLSAALRLLSTQCVGGKTKVSQQEQIA 227 Query: 172 QWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAK 231 + + ++ E +E + A A S+ R+ ++ G TP+Q + + R+ A Sbjct: 228 AERMKQMLRFVEEHYAEELTVERIAASVALSESACLRSFRQMLGITPIQYVKQFRVEKAA 287 Query: 232 KQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 + L T +I E G++ S FIKTF+++ TPK YR K Sbjct: 288 ELLRSTRLKTGEIGMECGFADGSYFIKTFREIKHCTPKEYRAKF 331 >UniRef50_Q0TS97 Transcriptional regulator, AraC family n=6 Tax=Clostridium RepID=Q0TS97_CLOP1 Length = 285 Score = 212 bits (542), Expect = 7e-54, Method: Composition-based stats. Identities = 59/282 (20%), Positives = 110/282 (39%), Gaps = 20/282 (7%) Query: 13 TAREQQLFNGKNFHVFIYNKTESI----SGLHQHDYYEFTLVLTGRYFQEINGKRVLLER 68 +E + +F + Y+ T + H H E +L G + I+ +++L ++ Sbjct: 5 DYKENKQHGTFDFPIEFYHVTPNHSRYNMPYHWHTECEIIRILEGEFILFIDKEKILAKK 64 Query: 69 GDFVFIPLGSHHQSFYEFGATRILNVGISKRFF--------EQHYLPLLPYCFVASQVYR 120 D +F+ G H + + +Q Y + +A ++ Sbjct: 65 NDIIFVHSGIFHGGL--PNDCIYECIVFDMKLLLKDNNACTKQIYDIVNHNKVIAHKLPS 122 Query: 121 TNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYR------EEQVIDDVPQWL 174 A ++ ++ ++ TG E + +Y+I + + + Sbjct: 123 NVQALNNCCTSLFEAMRVKSTGYEFIAQGALYYLIGTILENQLYVKNNKYTKKTKERFLQ 182 Query: 175 KSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQL 234 V + + E + LE++ S S +Y R KTP++ +N RI + ++L Sbjct: 183 LKNVITLIENEYQNPLTLEDLSKASGMSPKYFCRFFHEMINKTPIEYLNYYRIEISCEKL 242 Query: 235 EMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 T S+T+IA G++ S FIKTFKK TPK Y K L Sbjct: 243 LATELSITEIALNCGFNDVSYFIKTFKKHKGVTPKQYLKSLK 284 >UniRef50_UPI0001789C33 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C33 Length = 293 Score = 212 bits (542), Expect = 9e-54, Method: Composition-based stats. Identities = 54/272 (19%), Positives = 102/272 (37%), Gaps = 15/272 (5%) Query: 18 QLFNGKNFHVFIYNKTE-SISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPL 76 +F +F +FI + E H HD+ E + V G + + + + ++RGD IP+ Sbjct: 11 DIFFNPDFDIFINREVEGFCLSQHTHDFIEISYVEEGSGYHYVEDQLIPIKRGDLFVIPI 70 Query: 77 GSHH--QSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVY------------RTN 122 G+ H + + I N EQ + + S +Y Sbjct: 71 GTSHVFRPSSQDNQLVIYNCIFRTCLLEQLKSVICESTKLHSLLYGSSPSAKWLQYQDKF 130 Query: 123 NAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMH 182 + FL+ + + + E + V+ L+ Y + + P + Sbjct: 131 DKFLSIMHGMFREYLKKGPRYEFLMMGQLIQVLAMLQRYECDGSMVSTPTNNMDDAIQYI 190 Query: 183 DKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 + + ++ + S S + R ++ G T MQ + IR+ + L+ T S+ Sbjct: 191 NDHFATNLTVQQVAERSFMSPSHFQRLFKKTTGVTFMQFLQNIRVQRCCELLKSTEISIQ 250 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 + A + GY F F+K T TP+ YR+ Sbjct: 251 EAANQVGYQDMKFFHSLFRKKTGVTPREYRRS 282 >UniRef50_A7VU88 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VU88_9CLOT Length = 308 Score = 211 bits (537), Expect = 3e-53, Method: Composition-based stats. Identities = 59/303 (19%), Positives = 108/303 (35%), Gaps = 26/303 (8%) Query: 2 MQPVINAPEIATAREQQLFNGKNFHVFIY-----NKTESISGLHQHDYYEFTLVLTGRYF 56 M V ++ +E + + H +Y ++ H HD +E + G Sbjct: 1 MPKVEKMDLDSSLKETITYESQMLHYGLYTAGYQRVFQADIPWHWHDEFELGYISGGSVV 60 Query: 57 QEINGKRVLLERGDFVFIPLGSHHQSFYEFG--ATRILNVGISKRFFEQHYLPLLPYCFV 114 + +G V L GD +FI G H R+ K F LL +V Sbjct: 61 YQTSGLTVTLHEGDGIFINSGVLHYLHPLEPCREARLQTQFFDKSFLAGSLGSLLDIKYV 120 Query: 115 AS----------QVYRTNNA---FLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHY 161 A +YR++ FL ++ + + +E E + + + + + Sbjct: 121 APVLDQRQLEAVPLYRSDPESKGFLECLQKGVELCSRKEEFFELRLRNLFSELWESIYRW 180 Query: 162 REEQVID------DVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYG 215 ++ + + + + ++ ++ A S+ R Q G Sbjct: 181 AAQKESSTPSLRRSIEDDRIKQMMRYVQAHFSEKISVSSIAASIPISERECYRLFQNSMG 240 Query: 216 KTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 TP++ + +R+ A+ L TN S+ DIA E G+ S S F K F+ TP YR Sbjct: 241 ITPIEYLISVRLQNAQSLLMNTNKSILDIALETGFGSSSYFGKIFRSHHRLTPAQYRNLS 300 Query: 276 TEF 278 + Sbjct: 301 RQK 303 >UniRef50_C0EGN7 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGN7_9CLOT Length = 326 Score = 210 bits (536), Expect = 4e-53, Method: Composition-based stats. Identities = 57/275 (20%), Positives = 110/275 (40%), Gaps = 20/275 (7%) Query: 23 KNFHVFIYNKTESISG---LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSH 79 KN H+ ++ + E+++ LH+H +YE V G N + ++ G+ + + + Sbjct: 52 KNLHISLHPRPENVNPKMLLHKHTFYELMYVYRGSCVNHFNENTITIQEGEMLLLNPNTA 111 Query: 80 HQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVY----------------RTNN 123 H + N+ + FF+ LL + S + Sbjct: 112 HCPETLTDQDCVFNIMFRQNFFQYSLDLLLKDNTLFSSFFMECMFQSSIARDYLFFLPGK 171 Query: 124 AFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM-H 182 A +E +I +++ E + + + L + + ++ + + Sbjct: 172 ASADTIERLIVECFEKQSCYETITQSLLVELFAYLARNSDNSFSYPKNNHERLILKIITY 231 Query: 183 DKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 +E +E L+ + S YL+R ++Y GK +I+ + R+ AK LE ++ S+ Sbjct: 232 IQESPAEITLQKVSEQFQYSTAYLSRMIKQYTGKNFSEIVRDCRLTKAKYYLESSSLSIL 291 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 DIA GY+ S F K FK+ TP YRK + Sbjct: 292 DIALILGYNDVSHFYKVFKQEIGCTPTEYRKHYSH 326 >UniRef50_C6D193 Transcriptional regulator, AraC family n=2 Tax=Bacteria RepID=C6D193_PAESJ Length = 833 Score = 210 bits (536), Expect = 4e-53, Method: Composition-based stats. Identities = 46/267 (17%), Positives = 88/267 (32%), Gaps = 8/267 (2%) Query: 14 AREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVF 73 + + + V ++ + H H E VL G ++ ++ L D + Sbjct: 3 YHYEFVETQDDLPVRLFVNSVKDIRFHWHKEIELIYVLQGAVTVYVDQRQYRLAEDDIIA 62 Query: 74 IPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRT-NNAFLTYVETV 132 I S H+ +L + + ++ R + + + Sbjct: 63 INSMSVHKLECTNLDNVLLTLQFGPELLDDEGTLFDCNSMSQTEYNRYRYDRLRRCLARM 122 Query: 133 ISSLNLRETGLEEFVEMVTFYVINRLRHYR-------EEQVIDDVPQWLKSTVEKMHDKE 185 + N + G + +I L Y + D + + + DK Sbjct: 123 VWESNKKGPGHRNYSMGSLQTLIGHLTRYFTAGTNGGPREKGKDYDYMRLNRIIQYVDKH 182 Query: 186 QFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIA 245 + L+ + S Y + G + + IR+ A QL T+ S+T IA Sbjct: 183 YNEKITLQTIADQEHLSLHYFSHFFSDKIGIPFQKYLTLIRLEKAAAQLSDTDKSMTQIA 242 Query: 246 FEAGYSSPSLFIKTFKKLTSFTPKSYR 272 + G+++ LF + FK TP SYR Sbjct: 243 LDCGFANVKLFNQYFKGKYGSTPGSYR 269 >UniRef50_C7G755 Transcriptional regulator, AraC family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G755_9FIRM Length = 302 Score = 210 bits (535), Expect = 6e-53, Method: Composition-based stats. Identities = 49/283 (17%), Positives = 104/283 (36%), Gaps = 18/283 (6%) Query: 10 EIATAREQQLFNGKNFHVFIYN----KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVL 65 +E + K+ IY+ +H HD +E V +G I+G+ + Sbjct: 14 MYFELKENKPHGTKDNPFSIYHIENAGRSFQIPVHWHDEFEIIYVKSGLLTVSISGESYI 73 Query: 66 LERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVY------ 119 + GD + G+ H + G ++ +L + Sbjct: 74 GKAGDAFVVSPGNLHLMGSQTGTVDYFTFLFPLKYISFRTDDMLDDKLLEPLNSGHLMIN 133 Query: 120 -RTNNAFLTYVETVISSLNLRETGLEEFVE-------MVTFYVINRLRHYREEQVIDDVP 171 R ++ E +I E + ++ +++ + + Sbjct: 134 PRVKDSAKELCEQLIDIYMAENDETESKITAQIKTKIILLQFILEMWKKGFVIENDTSGR 193 Query: 172 QWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAK 231 ++ + + + +L+ S++Y++R + ++ T Q I +R+ AK Sbjct: 194 NIVEKEMVSYIQQNFTGKISLKEFGEQFHLSEKYISRYFKEHFHITLSQYITYLRLENAK 253 Query: 232 KQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 + L+ T+ SVT+ A ++GY + S FI++FKK +P YR Sbjct: 254 QLLQDTDLSVTETAMQSGYQNVSYFIRSFKKAYGISPLKYRNS 296 >UniRef50_A7VQ18 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VQ18_9CLOT Length = 280 Score = 209 bits (534), Expect = 6e-53, Method: Composition-based stats. Identities = 53/271 (19%), Positives = 107/271 (39%), Gaps = 16/271 (5%) Query: 21 NGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH 80 +N +Y + H H + E G ++NG+ + GDFV I H Sbjct: 10 EDRNLPFSVYIAQDEKFSWHCHKHMELDYCSEGHCTIKVNGESYDCQPGDFVIIHTMEDH 69 Query: 81 QSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQV-----------YRTNNAFLTYV 129 ++L V + + + P ++ + + + + Sbjct: 70 TLI-RNSDCKLLGVQMDLSVLDTAFSPFYESQYLVPFIRGSGKYQRRIRVPKGSLLESIL 128 Query: 130 ETVISSLNLRETGLEEFVEMVTFYVINRLRHYRE----EQVIDDVPQWLKSTVEKMHDKE 185 ++ ++ G E +++ + + L + E+ ++ V ++ Sbjct: 129 SEILVEYQKKQPGYEMYIKGDILRLFSCLVRTKVIEIGERNVNFQDLERIKPVIDYMEQH 188 Query: 186 QFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIA 245 +E ++ ++ S + R ++ GKT ++ N IRI A+K L T+ ++T+IA Sbjct: 189 IETELSVAAAAKIACMSYYHFCRLFKKVIGKTFVEYQNFIRIRRAEKLLITTDRTITNIA 248 Query: 246 FEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 FE G+ S + F + FKK T P +YRKK+ Sbjct: 249 FETGFGSVAYFNRVFKKETGQAPANYRKKMR 279 >UniRef50_UPI0001BC2F1F 2-isopropylmalate synthase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC2F1F Length = 288 Score = 209 bits (534), Expect = 6e-53, Method: Composition-based stats. Identities = 46/280 (16%), Positives = 102/280 (36%), Gaps = 17/280 (6%) Query: 10 EIATAREQQLFNGKNFHVFIYN----KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVL 65 T +E + K++ Y+ +T +H HD E + G I+ + Sbjct: 1 MYLTLKENRNHGTKDYPYSQYHVFNQQTAFQFPIHWHDELEIIYIRNGSINITIDNELFT 60 Query: 66 LERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVAS--------- 116 G F + G H + F + Sbjct: 61 GTGGSFFIVNPGELHYMGSNDLNADYYTILFPLEFISFQSNDYVENMLFKPMRSSHVILT 120 Query: 117 ---QVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVP-Q 172 ++ +E +I + + +++ +++ + + V Sbjct: 121 HSLPYSEIYAEIISLLEKLIYINKYEKGFYQLDCKILLLEILSNILSIPDILVKKTSNAS 180 Query: 173 WLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKK 232 ++ + + + L ++ S++Y++R ++++ T + +N +R+ +AK Sbjct: 181 DMRREIITYVNDNYLEKITLSDLADEFHMSEKYISRYFKKHFNITFSKYVNHMRLLYAKN 240 Query: 233 QLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 L+ TN S+TD+A +G+ + S FI++FK+ TP SYR Sbjct: 241 LLDTTNISITDVALSSGFPNVSYFIRSFKESYGKTPFSYR 280 >UniRef50_A7VID9 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A7VID9_9CLOT Length = 289 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 49/289 (16%), Positives = 108/289 (37%), Gaps = 18/289 (6%) Query: 10 EIATAREQQLFNGKNFHVFIYN----KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVL 65 +E + K+ Y+ +H HD +E V +G I+G+ + Sbjct: 1 MYFELKENKPHGTKDDPFSTYHIENAGQSFQIPVHWHDEFEIIYVKSGFLTVNISGENYI 60 Query: 66 LERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQ-------V 118 + GD + G+ H + G ++ + +L + Sbjct: 61 GKPGDAFVVSPGNLHFMGSKTGTVDYFTFLFPLKYISFYTDDILDDRLLEPLDSGRLMIS 120 Query: 119 YRTNNAFLTYVETVISSLNLRETGLEEFVE-------MVTFYVINRLRHYREEQVIDDVP 171 + E +I +++ E + ++ +++ + Sbjct: 121 PSVKDTIKELCEQLIEIYEAKKSERELNITTQIKTKIILLQFILEMWEKGFIVENNTSGR 180 Query: 172 QWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAK 231 ++ + + + +L+ S++Y++R + ++ T Q + +R+ +AK Sbjct: 181 NIVEKEMVSYIQQNFTGKISLKEFGEQFHLSEKYISRYFKEHFHITLSQYVAYLRLEYAK 240 Query: 232 KQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 + L+ T+ SVT+ A +GY + S FI++FKK +P YRKK + Q Sbjct: 241 QLLQDTDISVTEAAMRSGYQNISYFIRSFKKTYGVSPLKYRKKQVDCMQ 289 >UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IWY8_9BACL Length = 293 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 54/259 (20%), Positives = 96/259 (37%), Gaps = 17/259 (6%) Query: 35 SISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYE---FGATRI 91 S+ G H HD +E +++G I + + GD V IP+ H++ Sbjct: 26 SMDGEHFHDAWEIYYLVSGERCYFIKDQIYRIGAGDLVLIPVNVLHKTSPSGKLSQPHER 85 Query: 92 LNVGISKRFF-------EQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLE 144 + V E+ L V + +++ + G E Sbjct: 86 ILVNFRTEVVSALLPGREEELEQLFAKYPVLRLSAEEQQLVQQLLARMLAEQKQQAGGYE 145 Query: 145 EFVEMVTFYVINRLRHYREEQVIDD-------VPQWLKSTVEKMHDKEQFSESALENMVA 197 E+ +++ ++ L + D P + V + + +L ++ Sbjct: 146 EYCQLLLAELLLNLLRMANARPNHDGEEGGGKRPYREIAEVARYINAHYDENLSLSDLAN 205 Query: 198 LSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFI 257 S YL+ R G T + IN +RI A L T VT+IA+ GY S + F Sbjct: 206 RFHLSPYYLSHLFPRVTGLTLVAYINRVRIEEACALLRETELPVTEIAYRVGYQSGTHFG 265 Query: 258 KTFKKLTSFTPKSYRKKLT 276 + FKK + +P+SYR++ Sbjct: 266 RVFKKAKAVSPQSYRREQR 284 >UniRef50_C6J7Z0 Helix-turn-helix domain-containing protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J7Z0_9FIRM Length = 302 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 113/290 (38%), Gaps = 22/290 (7%) Query: 5 VINAPEIATAREQQLFNGKNFHVFIY-----NKTESISGLHQHDYYEFTLVLTGRYFQEI 59 +I + + E ++ ++I + + H HD E+ ++TG+ + Sbjct: 3 LIRTELMPDSSEVVPYDHAGIPLYIRAAHLASYYNMCAPCHWHDDIEWIYIITGKMRYYV 62 Query: 60 NGKRVLLERGDFVFIPLGSHHQSF-YEFGATRILNVGISKRFF-------EQHYLPLLPY 111 NGKR++L GD + + H + +E L + F E+++LP Sbjct: 63 NGKRLILNEGDSLMVNARQMHYGYAFEQQDCYFLCILFHPSLFGNNQILQEKYFLPFFEN 122 Query: 112 CFVASQVYRTNNA----FLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHY-----R 162 + + +N+ Y++ V+ ++G E V + + L Sbjct: 123 TSLEFHHFYSNDEAGVKVGRYLQEVLLLKEDSDSGYELGVISCMLELWSFLIRTDLLSAA 182 Query: 163 EEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQII 222 + + + ++ + + + +L ++ A + + + Y ++P+ + Sbjct: 183 KNKSESEQELNIQKDMVSFIYQHYPEKISLTDIAAAGHVGRSKCCQIFKHYMQQSPVDFL 242 Query: 223 NEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 N R+ + + L T S+T+IA G++ S F K F + TP+ YR Sbjct: 243 NTYRLKISCRLLCTTQKSITEIAILCGFNHLSYFSKYFMECYGCTPREYR 292 >UniRef50_B6FM02 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B6FM02_9CLOT Length = 294 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 44/263 (16%), Positives = 94/263 (35%), Gaps = 16/263 (6%) Query: 32 KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRI 91 K H H++ + ++G E ++ D V + H Sbjct: 26 KNGQNFPRHWHEHLQVYYFISGTAKLECGKNNFEVQANDLVIVNPNELHYLESTSDNLVF 85 Query: 92 LNVGISKRFF---------EQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETG 142 + F ++ P+ + + + N V+ V+ ++ G Sbjct: 86 YTIRFEPSFLFSNHVDLLQTKYLTPITLNRIEFNNLIQNNTELTELVKKVLMEYFNKKIG 145 Query: 143 LEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVE-------KMHDKEQFSESALENM 195 E ++ +Y++ L + ++ K ++ +K+ + L + Sbjct: 146 YELAIKGYIYYLVVTLLRNHVQHILTQSELDDKEATLIRFQPAFELIEKKYNEKITLSKL 205 Query: 196 VALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSL 255 S + R+ ++ GKT IN IR++ + L+ T+Y++T+IA G+ + + Sbjct: 206 ANTVGLSVHHFCRSFKQLTGKTTTDYINNIRLDKSIYYLKQTDYNITEIALMCGFENGNY 265 Query: 256 FIKTFKKLTSFTPKSYRKKLTEF 278 F + FKK S +P YR Sbjct: 266 FSRIFKKYHSTSPSQYRNLYKNL 288 >UniRef50_C6L8V9 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L8V9_9FIRM Length = 300 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 50/291 (17%), Positives = 98/291 (33%), Gaps = 22/291 (7%) Query: 5 VINAPEIATAREQQLFNGKNFHVFIYNKTESISG-----LHQHDYYEFTLVLTGRYFQEI 59 +IN + A E ++ ++I S H H+ E V+ G I Sbjct: 1 MINTDIMQDASEIVHYDNPGVPLYIRTGILSNYPDMKALCHWHEDIELIYVIEGEMNYRI 60 Query: 60 NGKRVLLERGDFVFIPLGSHHQSFYE-FGATRILNVGI-------SKRFFEQHYLPLLPY 111 N + +LL+ D + + H + R + + S + ++ + P + Sbjct: 61 NDRDILLKEKDCLVVNSRQLHYGYAHLRRECRFICILFHPGLLNASPKIYQYYVAPFIEN 120 Query: 112 CFVASQVYR----TNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRL-----RHYR 162 +A Y + + ++ + E + + L Sbjct: 121 KNIAYFHYAADSANHEQVQALLNRILLLKTEEKDAYELEAISTLYLLWRILFLQHKSLLE 180 Query: 163 EEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQII 222 +E D L+ + + L+ + A S+ +RY ++P+ Sbjct: 181 QEPAYDYSDLTLQKKMVSYIYEHYQDTLTLDAIAASGNISRSKCCIIFKRYLRQSPIDFA 240 Query: 223 NEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 N+ R+ ++ L T S+ IA G++ S F K F + TP YRK Sbjct: 241 NKYRLEVSRYLLANTRSSIAQIAVSCGFNHLSYFSKLFCREYGCTPTEYRK 291 >UniRef50_C7IIE8 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IIE8_9CLOT Length = 290 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 49/284 (17%), Positives = 97/284 (34%), Gaps = 23/284 (8%) Query: 12 ATAREQQLFNGKNFHVFIYNK-----TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLL 66 +E+ + NF + I+ ++I LH H+ +E+ V GR +++ + + Sbjct: 4 EMLKEKVMHGDDNFPIGIHKTDIDKGRDNILYLHWHEGFEYLTVTKGRAVFKVDDLEIEV 63 Query: 67 ERGDFVFIPLGSHHQSFYEFGA-TRILNVGISKRFFEQHYLPLLPYCFVASQVYR----- 120 +G+ +FI H + V F + + F+ + Sbjct: 64 SKGEGIFINSNVLHSAHSINEEECSFFAVVCHPAFLSSYINDCINQRFINPILNHSLYFP 123 Query: 121 --------TNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQ----VID 168 L + V +E G E ++ + + ++ Sbjct: 124 IHLKKDVDWQRNILLLLTQVYDINKEKEFGYELLLKSKIYEIWFECIKNAKKSINKGSNT 183 Query: 169 DVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRIN 228 V + F++ + +L S E+ R + T + +N RI Sbjct: 184 SYKTERMKVVLNYIHENYFNKIVVSEFASLVHMSDEHFCRFFKAMTHFTLVSYVNRYRIE 243 Query: 229 FAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 + L TN +++IA + G+ S F K F+K+ TP YR Sbjct: 244 RSCVFLSQTNKKISEIAGDVGFGDISYFNKVFRKIMGCTPVDYR 287 >UniRef50_C5RYV2 AraC family transcriptional regulator n=1 Tax=Actinobacillus minor NM305 RepID=C5RYV2_9PAST Length = 300 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 49/291 (16%), Positives = 103/291 (35%), Gaps = 20/291 (6%) Query: 4 PVINAPEIATAREQQLFNGKNFHVFIYNKTES-----ISGLHQHDYYEFTLVLTGRYFQE 58 +++ + +E F + +Y T S H HD Y+F+ V G + Sbjct: 7 QIVDVKIDRSNQELTNHGDFTFPLAVYKNTLSKNLLGYVIWHWHDEYQFSYVTQGEIYFY 66 Query: 59 INGKRVLLERGDFVFIPLGSHHQSFY-EFGATRILNVGISKRFF---------EQHYLPL 108 IN + +L+ G +FI G H + + + I K+ F +++ L Sbjct: 67 INDQTFILKEGQGIFINTGCMHSIKAVNDPESTYVCINIDKKLFSSFKGSVIEQKYLNTL 126 Query: 109 LPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVI- 167 + + ++ + + E + + + + ++ Sbjct: 127 TQSAIFLDLSEEWHIECINKLKDIYQFYVDKSFSFEIDICINLMQTLALVVKNALNPILL 186 Query: 168 ----DDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIIN 223 + + + LE + ++ R +R T + + Sbjct: 187 TTIESKDEYQKIKKILSFLHQHYAEKITLEQIAQHIFLNKNECCRLFKRKTKMTIFEYLL 246 Query: 224 EIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 E R+N + + L ++ S++ IA + G+S+ S +I TF K TP YRK+ Sbjct: 247 EHRLNKSIELLIHSDKSISQIAIDTGFSTVSYYIDTFHKNVGITPNEYRKR 297 >UniRef50_C9AXT8 Putative uncharacterized protein n=2 Tax=Enterococcus casseliflavus RepID=C9AXT8_ENTCA Length = 308 Score = 207 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 50/290 (17%), Positives = 101/290 (34%), Gaps = 21/290 (7%) Query: 6 INAPEIATAREQQLFNGKNFHVFIYNK-----TESISGLHQHDYYEFTLVLTGRYFQEIN 60 IN P E ++F + Y E H H E V G+ +N Sbjct: 3 INQPAALAYYEAANHGTEDFPLAYYPNLVSVWREFFFVPHWHKEIEILCVHQGQLELVVN 62 Query: 61 GKRVLLERGDFVFIPLGSHHQSF-YEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVY 119 G ++ V IP + H ++ + R + S++ + + + Sbjct: 63 GFSRKIKANTIVLIPPNTLHTAYRIAQQSCRFSCIVFSEQLITSRQSDRIQSQQIDPFLI 122 Query: 120 RT-----------NNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVID 168 + + LT + + + E ++ + +++ L +Q Sbjct: 123 QEGVTSYVDFPDKSQQSLTLFQLFDQCFMGKSSYRELRLKGIVIQLLSHLLEVGTDQPAK 182 Query: 169 DVPQWLK----STVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINE 224 + L+ V L+++ + S+E TR ++ + +PM +N Sbjct: 183 KSSERLQEKREKIVLSYIHSNYHEMIQLQDLADSVSLSKEQFTRFFKQSFRTSPMAYLNH 242 Query: 225 IRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 R+ + + L T+ ++ IA G+ + + F FKK+ TP YRK Sbjct: 243 YRLIRSAELLRETDLTMVAIAQAVGFCNSNHFSVCFKKMFGETPTQYRKN 292 >UniRef50_A8SQN1 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8SQN1_9FIRM Length = 294 Score = 207 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 49/294 (16%), Positives = 93/294 (31%), Gaps = 23/294 (7%) Query: 6 INAPEIATAREQQLFNGKNFHVFIYNKTE----SISGLHQHDYYEFTLVLTGRYFQEING 61 +N+ E E + F Y + + LH H++ E + G+ ++ Sbjct: 1 MNSLEYENLLENKTHADPMFPYNTYLCSIPLDFNSVSLHWHEFMEIIYIKKGKGNVTVDF 60 Query: 62 KRVLLERGDFVFIPLGSHHQSFYEFG-ATRILNVGISKRFFEQHYLPLLPYCFVASQV-- 118 +E GD + I G H G + N+ S F L F + Sbjct: 61 TTHYVEEGDIIIILPGHIHGISQHEGYSMEYENILFSVDMFRSKNHDSLDSEFFLPLLAG 120 Query: 119 -----------YRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVI 167 + + V + G ++ F L + Sbjct: 121 DVDIKSIYDKDDPLYPQLSSCLNRVDKLCSETPKGYHLALKGCYFEFFYVLFTNSTVRDE 180 Query: 168 DDVPQW-----LKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQII 222 D + D+ ++ ++ + S+ + R + G + + + Sbjct: 181 ADRKNRSRDLERTKLILSYIDENYKEAISITDIASYCGFSESHFMRFFKNTMGVSFVSYL 240 Query: 223 NEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 N+ R+N A + L + SV +A G+ + S F + FKK TP YR+ Sbjct: 241 NDFRLNVAARLLSTNDDSVLSVAENCGFFNLSYFNRMFKKKYGVTPSRYRETHN 294 >UniRef50_UPI0001788C0B transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788C0B Length = 288 Score = 207 bits (527), Expect = 4e-52, Method: Composition-based stats. Identities = 52/285 (18%), Positives = 104/285 (36%), Gaps = 19/285 (6%) Query: 11 IATAREQQLFNGKNFHVFIYNKTESISGL---HQHDYYEFTLVLTGRYFQEINGKRVLLE 67 + + + Y++ + H HD+YE +L+G I + + Sbjct: 1 MTKPFRADYHDPTGYLSMEYDRRIGYFSMSADHLHDHYELYYLLSGERIYFIKDRSYRVR 60 Query: 68 RGDFVFIPLGSHHQSFYEFGATR-ILNVGISKRFF----------EQHYLPLLPYCFVAS 116 GD VF+ + H++ L + I+ F E P + Sbjct: 61 AGDLVFVDRNAVHKTLDSGRPDHDRLVLYINPELFADLAVPPELAEGLKEPFGWDVPILR 120 Query: 117 QVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYRE-----EQVIDDVP 171 + A V +++ + + G + T ++ R + V Sbjct: 121 LPSPASEAVERMVGDMVNEMIHPQAGSSWLLRHRTVELLLFAYRSRHLGMVRSADTEPVL 180 Query: 172 QWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAK 231 V + + L + S YL+R ++ G T +N +R+ A+ Sbjct: 181 HPKTQAVVRYLNDNYRQALTLPEVAEAFRISPHYLSRLFKQTTGFTFSDYLNLLRVKEAQ 240 Query: 232 KQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 + L ++ S+TDIA+ +G+S+ S F K FK+ +P++YR++ Sbjct: 241 RLLRESDDSITDIAWRSGFSNFSHFGKMFKRTVQLSPRAYRQQYR 285 >UniRef50_C0EGI4 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGI4_9CLOT Length = 333 Score = 206 bits (526), Expect = 5e-52, Method: Composition-based stats. Identities = 56/273 (20%), Positives = 100/273 (36%), Gaps = 21/273 (7%) Query: 26 HVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYE 85 + H H+Y+E V G V L +GD + + H + E Sbjct: 59 PHLYNPNYQDERLFHNHNYFELAYVYRGECVHATKENTVRLHQGDAILMNPHVLHWMYTE 118 Query: 86 FGATRILNVGISKRFFEQHYLPLLPYC-----FVASQVYRTN-------------NAFLT 127 + N+ +SK F+ P + F Y+ N + Sbjct: 119 HPQDVVFNIMLSKEIFQSDVFPCMTDNRLLFHFFLDYFYQLNKLDDSLTFPHSPKHPIEP 178 Query: 128 YVETVISSLNLRETGLEEFVEMVTFYVINRLRH-YREEQVIDDVPQWLKSTVEK--MHDK 184 ++ ++ + + ++ + L YRE D L TV H + Sbjct: 179 LIKLMVEEFIEDDLCYDSVIKAHCIQLFAYLARVYRERYASTDADVELNQTVIHLIYHMQ 238 Query: 185 EQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDI 244 + + +LE++ S +++R + GK+ +++N +RI AK LE T+ + +I Sbjct: 239 QHLRQLSLESLAEAFHYSPSHVSRLFRTRLGKSYTEVLNSLRIQTAKSLLETTSLPMGEI 298 Query: 245 AFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 A G + S K FKK TP YRK+ + Sbjct: 299 ADSIGVNDTSYLNKIFKKKYGLTPLQYRKQFQQ 331 >UniRef50_B0AA61 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AA61_9CLOT Length = 300 Score = 206 bits (526), Expect = 6e-52, Method: Composition-based stats. Identities = 60/300 (20%), Positives = 98/300 (32%), Gaps = 24/300 (8%) Query: 1 MMQPVINAPEIATAREQQLFNGKNFHV-FIYNKTESI----SGLHQHDYYEFTLVLTGRY 55 M Q +I ++ +LF F Y+ H H+ E V +G Sbjct: 1 MEQQIIEIIVDENKQQLELFGTPMFPCKACYSDINKFVTGDISWHWHEEIEVIRVKSGSI 60 Query: 56 FQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILN-VGISKRFFEQHYLPLLPYCFV 114 ++ +L GD VFI H ILN + +K + FV Sbjct: 61 HLYLDNSDFVLNEGDGVFINSNILHYIRAGTSEECILNSLVFNKNLISGGVQSVFEQNFV 120 Query: 115 ASQVYRTN-------------NAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHY 161 V N ++ S E G E V ++ + Sbjct: 121 NPIVENKNLSGIAFYKNTSWGEEASACIKNAFSQFEKSEFGYEILVREYLSHIWYIMLKN 180 Query: 162 RE-----EQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGK 216 + + +D+ + K + L ++ + S+ R + G Sbjct: 181 IQDLNLNKNNRNDLNSERIKNILSFVHKNYNKQITLNDIAKVVNLSERECLRCFKNTLGI 240 Query: 217 TPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 +P+Q I + R++ A K L +T I+ G+ SPS F K FK+ TP YR K Sbjct: 241 SPIQYILKYRVSIATKMLRENKDPITIISDAVGFDSPSYFSKIFKRFIGITPTQYRNKSK 300 >UniRef50_C6L914 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L914_9FIRM Length = 306 Score = 206 bits (525), Expect = 8e-52, Method: Composition-based stats. Identities = 57/305 (18%), Positives = 107/305 (35%), Gaps = 38/305 (12%) Query: 6 INAPEIATAREQQLFNGKNFHVFIYNKTESISG--------LHQHDYYEFTLVLTGRYFQ 57 + +I +E +L F Y + S H H+ E G + Sbjct: 1 MKHSDITPLKENRLHGTAAFPCACYQADSAASPAGTPFLAKHHWHEELEIIYFEQGCFHL 60 Query: 58 EINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFF---------EQHYLPL 108 EIN ++ +E F I G H + E R + S E+ PL Sbjct: 61 EINMEKYEIEEECFCLIKSGDLHYIYSE-KDYREMAFVFSLSMLRAFAADPVQEKLVQPL 119 Query: 109 LPYCFVASQVYRTNNAFLTYVET-----------------VISSLNLRETGLEEFVEMVT 151 + N ++ + S + + Sbjct: 120 AEGSLSLPGLIYRQNPCFVILKREFLQIADAAGLPSGASNLRSQYRVSSLPQYMRAKASL 179 Query: 152 FYVINRLRHYREEQVIDDVPQWLKSTVEK---MHDKEQFSESALENMVALSAKSQEYLTR 208 + V TV+K + + ++ + A + +++Y R Sbjct: 180 LNIFAAFSEQNLLAVSQMPADRRVDTVKKTLSYMQEHMTEKVTMQELAAQANMNEQYFCR 239 Query: 209 ATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTP 268 ++ G+ P+ +NE+RI +A + L+ T++SVT+IA E+G+++ F++TF+ + TP Sbjct: 240 FFKKIIGRPPITYLNEMRIRYACRLLKETDHSVTEIALESGFNNLGNFMRTFRLVCGCTP 299 Query: 269 KSYRK 273 YRK Sbjct: 300 LQYRK 304 >UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VRD3_9CLOT Length = 277 Score = 206 bits (525), Expect = 8e-52, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 94/245 (38%), Gaps = 7/245 (2%) Query: 33 TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRIL 92 + H HD+ E V G + GK+ L GD V + G+ H+ + A L Sbjct: 31 PNWFNIQHSHDFCEILYVAGGAGEAILEGKKFRLAPGDLVVVNPGTLHEERSDAKAPLRL 90 Query: 93 NVGISKRF----FEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVE 148 + F L Y ++ YR Y+ ++ + + +E + Sbjct: 91 IFLAIRDFAVPGLPAGCLSQEKYRVLSCGEYRYKMDI--YLRELLQETSSQIEFYQEISQ 148 Query: 149 MVTFYVINRLRHYREEQVIDDV-PQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLT 207 + ++ + D+ +++ D+ S L+++ S+ YL+ Sbjct: 149 GLVSALLVLVMRLIRINPEDEAALSQECQKIKEYLDQNFTSPITLDSLSETVYISKHYLS 208 Query: 208 RATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFT 267 + G +P++ + R+ A + L T V++++ GY +P F + FK++ + Sbjct: 209 HLFKEQTGVSPIKYLTSKRMEKACELLSETELPVSEVSKAVGYENPLYFSQVFKRIYGIS 268 Query: 268 PKSYR 272 P YR Sbjct: 269 PVKYR 273 >UniRef50_Q7UYE3 L-rhamnose operon transcriptional activator n=1 Tax=Rhodopirellula baltica RepID=Q7UYE3_RHOBA Length = 290 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 54/289 (18%), Positives = 106/289 (36%), Gaps = 22/289 (7%) Query: 9 PEIATAREQQLFNGKNFHVFIYN-KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLE 67 I T +++ F+ F + + + GLH H++ E ++ G+ L Sbjct: 3 EMIPTLKKEDWFHPDGFPIVVERRDPQEPFGLHCHEFAEIVIITGGKGVHITGEDSYELV 62 Query: 68 RGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYC-----FVASQVYRTN 122 GD I H + ++N+ L F +R Sbjct: 63 TGDTFVIGGDRPHD-YLNMDQLSLINILFDPLELPLSIGDLQSLSGYHALFTLEPAWRKR 121 Query: 123 NAF--------------LTYVETVISSLNLRETGLEEFVEMVTFYVINRLRH-YREEQVI 167 + F L YVE++ L R G + ++ L Y + Sbjct: 122 HQFTSRLQLNPAELIETLRYVESLDQELKQRSAGFRTMATLTMLQLVTFLSRCYIRTRNP 181 Query: 168 DDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRI 227 + + + +L+++V +S S+ R + +P++ + ++RI Sbjct: 182 ESKKLLRIAEAISHIQRHFDRPISLDDLVEISGMSRRNFIRTFEGTMETSPIKYLIQVRI 241 Query: 228 NFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 A + L T+ S+TDIAF+ G+S + F + F+ +P+ YRK++ Sbjct: 242 QEASRLLRSTDRSITDIAFDVGFSDSNYFSRQFRTHLGLSPREYRKQMR 290 >UniRef50_C6JFK6 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFK6_9FIRM Length = 283 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 52/283 (18%), Positives = 103/283 (36%), Gaps = 20/283 (7%) Query: 14 AREQQLFNGKNFHVFIYNKTESIS---GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 +E+ + Y I H HD E + +G +N + + ++ GD Sbjct: 1 MKERSSHGSFELPIETYTDNCEIFHSLYNHWHDEMELIYIESGSGLVRLNKEILRVKAGD 60 Query: 71 FVFIPLGSHHQSFYEFGATRIL-NVGISKRFF--------EQHYLPLL-----PYCFVAS 116 + + G H + ++ F ++ + LL + + S Sbjct: 61 LIIVNRGVLHGIKTDLKNILYFRSIVFDLNFLSGPAGDLCQERVISLLMDNQAEFTHIIS 120 Query: 117 QVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWL-- 174 + + + S ++ ++ + F + D Sbjct: 121 RSDDNYGNICLLFDRIHSCHKEKKPYYFVKLKALFFSFFYEMLMGNYITPADKDENKSLA 180 Query: 175 -KSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQ 233 + + + ALS S+ Y + ++Y GKT + IN++RI AK Sbjct: 181 SIKKILDYINLNYSQPLTAAELTALSNYSEYYFMKLFKQYTGKTLIAYINDLRIEKAKPM 240 Query: 234 LEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 L ++ SVT+IA E G+++ S FIK F++ T +P +R+ L+ Sbjct: 241 LLHSDSSVTEIALEVGFNNTSYFIKKFQQATGMSPHKFRRNLS 283 >UniRef50_UPI0001C35241 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35241 Length = 275 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 56/266 (21%), Positives = 94/266 (35%), Gaps = 19/266 (7%) Query: 31 NKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATR 90 + LH H+ E TL+ +G + +I+ + +E+GD + I H + G + Sbjct: 2 PNSYRNLSLHWHEEMEITLIKSGTIYYDIDFETFSVEKGDLLLISPHILHSAHEMPGKSM 61 Query: 91 IL-NVGISKRFFEQHYLPLLPYCFVASQVYRT-------------NNAFLTYVETVISSL 136 + ++ F F+ +++ Sbjct: 62 VSDSLVFHLDFLGYQVPDACTIKFLNPVQSGKLRFLPVVKPGAAGYEEMKECFISLLECF 121 Query: 137 NLRETGLEEFVEMVTFYVINRLRHY-----REEQVIDDVPQWLKSTVEKMHDKEQFSESA 191 N ++ G E + + + + L Y E + + V Sbjct: 122 NGKQYGYELYTKELLMRLFRLLYQYGCVAKHEGTHGEFGAEEKLKEVLSYIQSNYRETLT 181 Query: 192 LENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 +E + ++ SQ + +RY G T M+ IN RI A L T V DIA E G+ Sbjct: 182 IEELSSVCHFSQTHFMNFFKRYAGMTCMEYINHYRITRAAADLVETERQVMDIAMENGFR 241 Query: 252 SPSLFIKTFKKLTSFTPKSYRKKLTE 277 + S F K FK+ TP SYRK E Sbjct: 242 NISYFNKVFKERFGVTPGSYRKNSRE 267 >UniRef50_A8SGH8 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A8SGH8_9FIRM Length = 288 Score = 204 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 54/286 (18%), Positives = 104/286 (36%), Gaps = 13/286 (4%) Query: 1 MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGL----HQHDYYEFTLVLTGRYF 56 M + RE +F + +K+ H H E L+G Sbjct: 1 MSTQRFDIRHAPAPRE-------SFRLLYISKSRFGGDWNSTTHTHSCTELFYCLSGEGQ 53 Query: 57 QEINGKRVLLERGDFVFIPLGSHHQSFYEF-GATRILNVGI-SKRFFEQHYLPLLPYCFV 114 + G+ ++ D V + H + +G+ S F Sbjct: 54 FYLAGQLFPVKPDDMVIVNPQVEHTELSLNASPLEYIVLGVASMEFLFSKADTNYAIFNC 113 Query: 115 ASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWL 174 R + SL+ ET ++ +E++ +++ + + Sbjct: 114 RENRERMVTLLHMLLAEADRSLDGCETVCQDLLEVLLIWLVRCTTISLQLEEAAPTENRE 173 Query: 175 KSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQL 234 + +++ D + +L+ + L+ ++ YL QR YG +P+ +N RI +K L Sbjct: 174 CAEIKRYLDTNYREDISLDLLAELAHLNKYYLAHTFQREYGISPITYLNRRRIEESKHML 233 Query: 235 EMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 T YS+ I+ G+SSPS F + F+K TP YR++ + + Sbjct: 234 GNTGYSLAQISELMGFSSPSYFSQCFRKAEGMTPNEYRRQTRQGKR 279 >UniRef50_UPI0001BC4191 helix-turn-helix domain-containing protein n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=UPI0001BC4191 Length = 306 Score = 204 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 56/287 (19%), Positives = 101/287 (35%), Gaps = 20/287 (6%) Query: 7 NAPEIATAREQQLFNGKNFHVFIY-----NKTESISGLHQHDYYEFTLVLTGRYFQEING 61 E + F +Y T H H E + G + EI Sbjct: 5 KILTDKNNEELAVHGNYEFPCAVYFSDVSKYTAGEIAWHWHKEIEIITIYKGTLYIEIEN 64 Query: 62 KRVLLERGDFVFIPLGSHHQS-FYEFGATRILNVGISKRFF--------EQHYLPLLPYC 112 K+ L++G+ +FI H RI++ K +Q Y+ L C Sbjct: 65 KKFTLKKGESLFINSEEMHFMRMDAREECRIISFVFDKVLICGEKGSKIDQKYIIPLINC 124 Query: 113 FVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREE-----QVI 167 S + T ++ S G E + V ++ + +E Sbjct: 125 KELSALELTEEDSQKLIQGYFS-YADEILGYEIVIRNVLSEILLNIVRENQELLEKSNGS 183 Query: 168 DDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRI 227 ++ + + K + +L ++ + + R R G +P++ + + RI Sbjct: 184 NNTDRERMKYMLTFIHKNYSEDISLGDIAKEAFIGEREALRCFARTIGTSPIEYLQKYRI 243 Query: 228 NFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 A + L + VT+I +AG++SPS F K F ++ TP+ YRK Sbjct: 244 YTAAELLRKSELPVTEICLQAGFNSPSYFSKVFCRMLGMTPREYRKN 290 >UniRef50_C6D359 Transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6D359_PAESJ Length = 309 Score = 204 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 50/297 (16%), Positives = 106/297 (35%), Gaps = 28/297 (9%) Query: 12 ATAREQQLFNGKNFHVFIYNK-------TESISGLHQHDYYEFTLVLTGRYFQEINGKRV 64 RE + K V I+ E I LH H+++E ++ G I+ + Sbjct: 5 KELRENTRIDEKMHPVQIFQNRALQKKPGELILYLHWHEHFEIIVMQQGSAVFHIDSESY 64 Query: 65 LLERGDFVFIPLGSHHQSFY-EFGATRILNVGISKRFFEQHYLPLLPYCFVASQVY---- 119 GD +F+P G+ H + G L + + F+ L +V + Sbjct: 65 EAHPGDVLFVPAGALHVGYSLCEGDLSYLAIVYNSSLFQNWMQDSLHTKYVLPYLEGRVQ 124 Query: 120 ---------RTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDV 170 + + +E S ++ + V+ ++ L + + Sbjct: 125 LPVKPTRLDPSCADYYYLLEQANSEFKAKQPAYQLMVKSQLHMLLTLLSRKFLPHQLPEQ 184 Query: 171 -------PQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIIN 223 + + + + + + + + + + ++ G+T + +N Sbjct: 185 ATNQYVHNREQFKALIEYIEANFADKQTVADAARRMNLNVHHFCKMFKKLTGRTFIDYVN 244 Query: 224 EIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 R+N A++ L + S+T+IA G + + F K +KK P RK+LT+ N+ Sbjct: 245 VCRVNEAERLLLAGDLSITEIAGCVGCDNSNYFTKMYKKYKGVAPSQLRKQLTDTNK 301 >UniRef50_B5CQG2 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CQG2_9FIRM Length = 277 Score = 204 bits (519), Expect = 3e-51, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 95/256 (37%), Gaps = 9/256 (3%) Query: 25 FHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFY 84 + + + + S H H + E VL+G + + + + D + I H Sbjct: 22 YSTYSKYEEDWSSYPHTHYFTELFFVLSGSGSFLVEDETFPIAKHDLIVINPNITHTEKS 81 Query: 85 E-FGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGL 143 + +G+ +++ ++ + Y T++ + Sbjct: 82 SLEDPLEYIVLGVDGL----NFVIDDANEYLLFHSDEMKDRLDFYFRTILEETENSQKDY 137 Query: 144 EEFVEMVTFYVINRLRHYREEQ----VIDDVPQWLKSTVEKMHDKEQFSESALENMVALS 199 E+ + + ++ L Y + S ++ D L+ + ++ Sbjct: 138 EKVCQNLLNILVVHLSRYASSSVEIFPFHKMESRECSRAKRYIDSSFRENITLDKLAEIA 197 Query: 200 AKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKT 259 ++ Y + YG +PM + + RI +++ L T+ S+ IA + G+SS S F + Sbjct: 198 QINKYYFSHTFTETYGISPMNYLTQKRIFTSQELLTSTDMSLAQIAQQCGFSSSSYFTQC 257 Query: 260 FKKLTSFTPKSYRKKL 275 F+K TP +YRK+ Sbjct: 258 FRKSCGMTPTAYRKQF 273 >UniRef50_C6JD68 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JD68_9FIRM Length = 311 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 58/311 (18%), Positives = 112/311 (36%), Gaps = 36/311 (11%) Query: 6 INAPEIATAREQQLFNGKNFHVFIYNK----TESISGLHQHDYYEFTLVLTGRYFQEING 61 + + +T +E ++ ++F Y ++ H H+ E G + E+N Sbjct: 1 MQNQQPSTLKEIRVHGTQDFPCAFYQTGTRIKGNMVKHHWHEEVELLYFSGGEFCLEVNM 60 Query: 62 KRVLLERGDFVFIPLGSHHQSFYEFGATRILN-VGISKRFFEQHYL----------PLLP 110 +R + F FI G H E + N V Y P+ Sbjct: 61 ERFNISEECFYFINPGELHSISVEKNGGCVENAVVFHMDMLNSAYALDQIQTNLIQPVQN 120 Query: 111 YCFVASQVYRTNNAFLTYVETVISSLNL-------RETGL-----------EEFVEMVTF 152 + R N V + RE + F++ Sbjct: 121 GSIQFPRCLRKNEPAFEPVRKSYEEIRNVFGGDSFRENYYDGEAVTDDITRQLFIKSALL 180 Query: 153 YVINRLRHYREEQVIDDVPQWLKSTVEK---MHDKEQFSESALENMVALSAKSQEYLTRA 209 ++ L +V + T++ + + + ++ L +++Y R Sbjct: 181 RILAVLSANNLFEVTEKNHDHRIETIKTTLTYIQENYKEKIYIRDLAGLIGMNEQYFCRF 240 Query: 210 TQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPK 269 ++ G++PM+ +NE RI A L+ ++ +VT+I E GY++ F++ F+K TS TP Sbjct: 241 FKKVIGRSPMEYVNEYRIKRAIHYLKESDLTVTEICLECGYNNLGNFLREFRKYTSTTPL 300 Query: 270 SYRKKLTEFNQ 280 YR+ + Q Sbjct: 301 QYRRHSLKETQ 311 >UniRef50_C0EDI6 Putative uncharacterized protein n=2 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDI6_9CLOT Length = 371 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 111/277 (40%), Gaps = 28/277 (10%) Query: 24 NFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSF 83 N H+ +N++ H+HD++E V+ G ++G+R+LLE+GDF + + HQ Sbjct: 91 NAHIPFFNRSPQ---PHKHDFFELVYVVRGSMKNVVDGRRILLEQGDFCLMNPNAVHQVE 147 Query: 84 YEFGATRILNVGISKRFFEQHYLPL-----LPYCFVASQVYRTNNA-------------- 124 + +N + K F + +L + L F +Y N Sbjct: 148 TDGKDPLAINFLMKKELFNKAFLSIVLENELFANFFVDSIYHKKNKQNYLVFSARHLEEP 207 Query: 125 -FLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQ----VIDDVPQWLKSTVE 179 Y+ + + + +E + + + + D+P S + Sbjct: 208 IISQYLLQIFREYENDQLYSQRVIESAMSCLFVEFTRSYKRELEFESLQDLPGGNISKII 267 Query: 180 KMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNY 239 + + L+ +YL ++Y G++ +I+ + R+ A + L+ T Sbjct: 268 SYLSENY-RTATLQTTAKQFNYHPKYLPNLLKKYLGQSFSEIVQQFRLAHACELLKQTEL 326 Query: 240 SVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 ++D+A E+GY++ + F K F++ +P YR + Sbjct: 327 PISDVAQESGYTNRTYFYKVFQQKFGMSPNDYRHQNQ 363 >UniRef50_C6JCU7 Transcriptional regulator n=3 Tax=Ruminococcus RepID=C6JCU7_9FIRM Length = 282 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 51/275 (18%), Positives = 99/275 (36%), Gaps = 16/275 (5%) Query: 16 EQQLFNGKNFHVFIYN----KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDF 71 E + F ++ + H H YE +L G ++ K + D Sbjct: 8 EDRPRGTYEFPFEFHHIDHTHPRYVMSYHWHVEYEIIRILEGSLTVTLDEKSFTAVKNDV 67 Query: 72 VFIPLGSHHQSFYEFGATRILNVGISKRF-----FEQHYLPLLPY-CFVASQVYRTNNAF 125 +F+ G H + + ++ ++ +L + + Sbjct: 68 IFVHSGILHSGIPHDCVYQCIVFDMNTFLKNNPVCGEYIQKILHQETMLFPHFSDEHPQI 127 Query: 126 LTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYR------EEQVIDDVPQWLKSTVE 179 L + + ++ ++TG E V ++ + D V Sbjct: 128 LNCISVLFDAMYEKDTGYELTVFGQFYHFFGLIFSNHYFIENPTRTRRDYKRILQLKQVL 187 Query: 180 KMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNY 239 + +K + L+ + A + S +Y R +TP+ +N RI A QL T+ Sbjct: 188 EFIEKNYANPITLQELSASVSMSPKYFCRFFSEMTHQTPVDYLNRQRIEEACLQLAATDD 247 Query: 240 SVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 S+T+IA+ G++ S FI+TFKK TP Y+++ Sbjct: 248 SITEIAYRNGFNDLSYFIRTFKKYKGMTPGKYKRR 282 >UniRef50_C7H5Z6 Transcription regulator, AraC family n=2 Tax=Ruminococcaceae RepID=C7H5Z6_9FIRM Length = 319 Score = 203 bits (518), Expect = 4e-51, Method: Composition-based stats. Identities = 53/286 (18%), Positives = 107/286 (37%), Gaps = 13/286 (4%) Query: 1 MMQPVINAPEIATAREQQLFNGKNFHVFIYNKT----ESISGLHQHDYYEFTLVLTGRYF 56 M + RE +F + +K+ + S +H H E L+G Sbjct: 32 MSTERFDIRHAPAPRE-------SFRLLYISKSRFGGDWNSTVHTHSCTELFYCLSGEGQ 84 Query: 57 QEINGKRVLLERGDFVFIPLGSHHQSFYEF-GATRILNVGISK-RFFEQHYLPLLPYCFV 114 ++G+ ++ D V + H + +G+S Sbjct: 85 FLLSGQLFPVKPDDMVIVNPQVEHTELSLNASPLEYIVLGVSGIEILFGKADSTYAIFNC 144 Query: 115 ASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWL 174 R + SL+ ET ++ +E++ +++ + + Sbjct: 145 RENRERMVTLLHMLLAEADRSLDGCETVCQDLLEVLLIWLVRCTTLSLQVEESPRSDNRE 204 Query: 175 KSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQL 234 +++ D E +L+ + ++ ++ YL Q+ YG +P+ +N RI +K L Sbjct: 205 CVEIKRYLDNNYREEISLDTLAEVAHINKYYLAHTFQKAYGISPITYLNRRRIEESKYML 264 Query: 235 EMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 T YS+ I+ G+SSPS F + F+K TP YR+++ + + Sbjct: 265 GNTGYSLAQISELMGFSSPSYFSQCFRKAEGLTPNEYRRQVRQGQR 310 >UniRef50_C0EIL7 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIL7_9CLOT Length = 332 Score = 203 bits (518), Expect = 4e-51, Method: Composition-based stats. Identities = 58/259 (22%), Positives = 105/259 (40%), Gaps = 24/259 (9%) Query: 39 LHQHDYYEFTLVLTGRYFQEI-NGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGIS 97 +H H Y+E V G N +R++L +GD + + + H + I N+ + Sbjct: 71 MHNHGYFELVYVYHGSCVNLFPNQERIVLNQGDILLLNPNALHCPYTTLEDDYIFNIVLK 130 Query: 98 KRFFEQHYLPLLPYC-----FVASQVYRTNN-------------AFLTYVETVISSLNLR 139 + FE+ L LL F + +YR N +E +I+ L + Sbjct: 131 PKLFEKSMLSLLSDNPLFSNFFVNYMYRVNKARDYMLFHTNGEKRIAQTMENIITELYSK 190 Query: 140 ETGLEEFVEMVTFYVINRLRHYREEQV----IDDVPQWLKSTVEKMHDKEQFSESALENM 195 E E + L +EQ+ D+V + + D+ + L+++ Sbjct: 191 EMCYRRAAEAELIVLFTCLARIYKEQLGLKGFDEVKNKQVTDIITYMDENFSQ-ATLQSV 249 Query: 196 VALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSL 255 S YL+R +++ K +II+ ++ A LE T+ + +IA G++ S Sbjct: 250 ADHFGYSTHYLSRMIKKHTNKNFSEIIHSFKLENACTYLETTDIPMREIAELVGFNDASY 309 Query: 256 FIKTFKKLTSFTPKSYRKK 274 F K FK+ +P YRK+ Sbjct: 310 FHKVFKQKYGQSPAEYRKQ 328 >UniRef50_C6LHD5 Putative transcriptional regulator YfiF n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LHD5_9FIRM Length = 288 Score = 203 bits (518), Expect = 5e-51, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 97/252 (38%), Gaps = 8/252 (3%) Query: 33 TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG-ATRI 91 +++ H H+YYE + G + + ++ G+ + H+S+ E + Sbjct: 36 NDNMMKSHYHNYYEIYYLEDGERYHMMQDDMYDMKPGELILFSPYIMHRSYGENDMPFKR 95 Query: 92 LNVGISKRFFEQHYLPLLPYCFVASQVYRTN----NAFLTYVETVISSLNLRETGLEEFV 147 + + LL + +YR + +E +I + + Sbjct: 96 IVLYFESSEVASK--ELLDALDENNGMYRPDAATRQKLHRMLEELIRQYENPSDFYKSYR 153 Query: 148 EMVT-FYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYL 206 + ++ L H R + + + + LE + SQ YL Sbjct: 154 RTLLNMFLFTMLMHTRRREPEQMEETGRTTQIVSYIHSHYQEDITLEQLAQKFYVSQFYL 213 Query: 207 TRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSF 266 R +RY T +Q +N R+ A+++L T+ ++T+I+ E G+S+ + F + FK +T Sbjct: 214 CREFKRYTNSTVVQYVNVTRVMNAQRKLMETDKTITEISRETGFSNLTHFNRVFKSVTGT 273 Query: 267 TPKSYRKKLTEF 278 TP YRK Sbjct: 274 TPSGYRKHHQNM 285 >UniRef50_C5RI71 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RI71_CLOCL Length = 300 Score = 203 bits (518), Expect = 5e-51, Method: Composition-based stats. Identities = 46/278 (16%), Positives = 94/278 (33%), Gaps = 24/278 (8%) Query: 22 GKNFHVFIY-----NKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPL 76 +F + N G H H EFT +L+G + N + L++ GD +F+ Sbjct: 21 NNDFPFRVDYEEITNYIGYSFGCHWHPEVEFTYILSGSMIYQANNTQHLVKAGDVIFVNQ 80 Query: 77 GSHHQSFYEFG-ATRILNVGISKRFFEQHYLPLLPYCFV-------------ASQVYRTN 122 H + R + + + + ++ + N Sbjct: 81 NCLHSGKASNDCSCRYFAITFNPTLISGYKSSIFENKYIGEIINSDRIPFVYFEGSKKEN 140 Query: 123 NAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEK-- 180 ++ + + + G E +E F + L +V D++ + K+ ++ Sbjct: 141 EQIVSLLMRLEELYREKAEGYELLIESKLFELWFYLYRDVYCKVPDELIKQTKNIMQIKA 200 Query: 181 ---MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMT 237 L+++ S+ R ++ TP + RI + L Sbjct: 201 ALDYIHDNYKENLTLDDISEACNLSKSSCCRLFKKIVHGTPFNYLLSYRIQRSIPYLLSE 260 Query: 238 NYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 ++T+ A G+SS S + + FKK TP Y+ + Sbjct: 261 GMNITEAALSVGFSSSSYYSEIFKKYMKCTPTEYKNNV 298 >UniRef50_C5RKC4 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RKC4_CLOCL Length = 292 Score = 203 bits (517), Expect = 5e-51, Method: Composition-based stats. Identities = 48/283 (16%), Positives = 94/283 (33%), Gaps = 24/283 (8%) Query: 14 AREQQLFNGKNFHVFIYNKT-----ESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLER 68 +E+ + I + E+ LH H +EF +L+G I K ++ Sbjct: 7 LKEKATHGTALIPIAIRHLNYAEGLENFFYLHWHSEFEFVYILSGAILYSIEDKEYCVKA 66 Query: 69 GDFVFIPLGSHHQSFYEFG-ATRILNVGISKRFF---------EQHYLPLLPYCFVASQV 118 G+ +FI H + G V F + P+L V Sbjct: 67 GEGLFIHSNQLHAARSFNGMPCEACVVLFHPNLFGHNKQSSTYSKFIYPILEGDLVFENY 126 Query: 119 YRTNNAFLTYVETVISSLNLRETGL----EEFVEMVTFYVINRLRHYR-----EEQVIDD 169 ++ + V ++S L+ + E ++ F + + + + + Sbjct: 127 FKCEEEWQRLVMKLLSELDDLKYENVSENELLLKSKIFEIWHLCYKNSVALAPQGRKNRN 186 Query: 170 VPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINF 229 V + E L + + S+ A + +P+ + RI Sbjct: 187 YKLERMQPVLNYIHENYKEEITLMALAKILPMSEGQFCHAFKEVMNISPIAYVIRHRILQ 246 Query: 230 AKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 + L T++ + DIA G+++ S F + F K +P YR Sbjct: 247 SCTLLTETDWKIADIARNVGFNNISYFNREFIKAIGCSPSKYR 289 >UniRef50_C1I2I2 Transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I2I2_9CLOT Length = 295 Score = 203 bits (517), Expect = 6e-51, Method: Composition-based stats. Identities = 68/293 (23%), Positives = 111/293 (37%), Gaps = 24/293 (8%) Query: 6 INAPEIATAREQQLFNGKNFHVFIYN---KTESISGLHQHDYYEFTLVLTGRYFQEINGK 62 ++ +EQ + +YN + + H HD EF +L G I+ K Sbjct: 1 MDNKSYLQLKEQVNHGNMQLPLEVYNVEFRNSADFYSHWHDEMEFIYILNGSAEICIDFK 60 Query: 63 RVLLERGDFVFIPLGSHHQSF-YEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRT 121 + GDF+ IP GS H E + + + E + L FV + Sbjct: 61 IFSVTTGDFIIIPNGSIHYMIGKENSKISYVALVFNLSLIEGNTLDYSQINFVNPIMKNK 120 Query: 122 -------------NNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRL-------RHY 161 + + +I S N + G + ++ F + + + + Sbjct: 121 LFFKNIIRTSNVGHAKIVNSFNNIIESYNNKSYGFQLEIKGSLFSIFSTIFKEGYISLNL 180 Query: 162 REEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQI 221 E D + V K + +++ + ++ S+ + R + GKT Q Sbjct: 181 NSENYSDLIKVENLKEVIKYIQTNYKNPISIKELADIAQYSEYHFLRFFKAQTGKTCTQY 240 Query: 222 INEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 IN RI A L TN S+T+IA+E G+ S FIKTFKK S +P YRK Sbjct: 241 INYFRIQKATLLLFDTNLSITEIAYEVGFGDVSYFIKTFKKFLSISPTKYRKS 293 >UniRef50_UPI000178AA6A transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178AA6A Length = 285 Score = 203 bits (517), Expect = 6e-51, Method: Composition-based stats. Identities = 50/286 (17%), Positives = 107/286 (37%), Gaps = 22/286 (7%) Query: 10 EIATAREQQLFNGKNFHVFIYN-----KTESISGLHQHDYYEFTLVLTGRYFQEINGKRV 64 T RE F + ++ + + + H H++ E ++G E Sbjct: 1 MDKTLREPMTMPDPQFPIKVHRCEFDGRGQVLFNHHWHEHLEILYFVSGEATLECGSTTF 60 Query: 65 LLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNA 124 + GD + I H + + + H L F+ + + + Sbjct: 61 TAKEGDMIVINRNELHYGLSQSDHLFYYALIADFSLLQSHSLDAPEMKFI-TPITQNRLI 119 Query: 125 FLTYVE---------TVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVP--QW 173 F + ++I L +E G E ++ + ++ L V+ + Sbjct: 120 FENRISGADALAPMLSIIKELERQEFGYELAIKSELYRLLTLLLRGYVATVLTQDEYVER 179 Query: 174 LKST-----VEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRIN 228 +K+ + K ++ + ++E + ++ S+ + +R + G+T + +NE R+N Sbjct: 180 MKNVERFAPIFKYIEEHYREDLSVEQLSGMAGLSRFHFSRLFKEISGRTVTEYVNETRLN 239 Query: 229 FAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 A L + +V++IA G++ F +TFKK P + RKK Sbjct: 240 RADYLLRESPLTVSEIAAATGFNDIYYFSRTFKKYKRMAPSALRKK 285 >UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RR78_9CLOT Length = 281 Score = 202 bits (516), Expect = 9e-51, Method: Composition-based stats. Identities = 50/246 (20%), Positives = 94/246 (38%), Gaps = 11/246 (4%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG-ATRILNVGIS 97 H H YYE +L+G+ IN LE GD IP H++ YE + S Sbjct: 35 PHYHSYYEIYYLLSGKCKMFINQDIYYLEPGDMTIIPPLEVHKALYEPSWEAERFGIYFS 94 Query: 98 KRFFEQHYLPLLPYCF---VASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYV 154 + F + + F +E +++ + E + + ++ + Sbjct: 95 RDTVTSFLSLCGREAFGHIFSQPKRTIPSEFRPKIEELLAQMQDEEKQGDSYCQIQLCSL 154 Query: 155 INRLR-------HYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLT 207 ++++ R E + + + ++ L + A + S Y + Sbjct: 155 LHQILVVLGRCQEARREGHALEEAEEAMVRAARYMNQHYQEGVTLGQVAAFANMSPTYFS 214 Query: 208 RATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFT 267 + + G + +N IR+ A L T+ SVT +A G+S + F F++LT + Sbjct: 215 KKFKSSTGLCFKEYLNYIRVQKASDMLRNTDLSVTGVAMACGFSDGNYFGDVFRRLTGVS 274 Query: 268 PKSYRK 273 P+ YRK Sbjct: 275 PREYRK 280 >UniRef50_UPI0001C36B6C helix-turn-helix domain-containing protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36B6C Length = 303 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 51/292 (17%), Positives = 106/292 (36%), Gaps = 22/292 (7%) Query: 6 INAPEIATAREQQLFNGKNFHVFIYNKTESISG-----LHQHDYYEFTLVLTGRYFQEIN 60 IN + A E ++ ++I S H HD EF ++ G IN Sbjct: 8 INVDIMQDASEIVRYDETGIPLYIQTGELSRYPDRKALCHWHDDLEFIRIVHGEMNYYIN 67 Query: 61 GKRVLLERGDFVFIPLGSHHQSFYEF-GATRILNVGISKRFF-------EQHYLPLLPYC 112 GK ++L+ D + + H L + + F +++ LPLL Sbjct: 68 GKNLVLKEHDGIMVNTRQMHYGSSINQNDCSFLCILVHPALFSSNRLIYQKYLLPLLEDR 127 Query: 113 FVASQVYR----TNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQV-- 166 + L + + E G E + + + + L + Sbjct: 128 ETEFVYLDSGRPDHGFILDCLMEMTQLKEHGEYGYELEIIGLFYLIWRHLARQFKAGKTA 187 Query: 167 ---IDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIIN 223 I+D+ ++ + + + L + A + + ++Y ++P+ +N Sbjct: 188 APGIEDMDTKVQKDMVSFIYQHYTEKLTLSAIAASGGVCRSKCCQIFKKYLCQSPIDFLN 247 Query: 224 EIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 R+ + L+ T+ S+T+IA E G++ S + + F + TP+ +R + Sbjct: 248 SYRLEVSSHLLKKTDKSITEIATECGFNHLSYYSELFMRHYGCTPRQFRSQH 299 >UniRef50_C4Z3B4 AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z3B4_EUBE2 Length = 291 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 44/291 (15%), Positives = 93/291 (31%), Gaps = 23/291 (7%) Query: 6 INAPEIATAREQQLFNGKNFHVFIYNKTES----ISGLHQHDYYEFTLVLTGRYFQEING 61 +N + +E + +F Y + LH H+ E + G ++ Sbjct: 1 MNITDYGPLKETKSHFDSDFLYNTYPCSIPLDFTEVPLHWHNEMELIYIKKGCMIVSVDL 60 Query: 62 KRVLLERGDFVFIPLGSHHQSFY-EFGATRILNVGISKRFFEQHYLPLLPYCFVA----- 115 + ++ GD V + G H E + N+ + F Sbjct: 61 EYSVVNAGDIVVVMPGHIHSIIQNESDSCEYENILFNLDMLVSRQCDYDTVSFFNGIAGF 120 Query: 116 --------SQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQ-- 165 S+ + + Y++ + G + F L + Sbjct: 121 NGYCPPVISKTAPHYSDLIHYIDEADNICKYFPDGYRLKIRACLFNFFFELNAHFYTHTD 180 Query: 166 ---VIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQII 222 + D V +K ++E + SQ + + + G + + + Sbjct: 181 MPVHLSDDKMDKLKLVLNYIEKNFARAISIEEIAQWCHFSQSHFMKFFKNCTGTSFITYL 240 Query: 223 NEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 N+ R+ A + L+ T V +A + G+ + S F + FK+ +P+ +RK Sbjct: 241 NDYRLIIAARILKTTTQPVIIVASDCGFDNISYFNRKFKEKYGVSPREFRK 291 >UniRef50_B1HRT8 Hypothetical transcriptional regulator (AraC/XylS family) n=2 Tax=Bacillaceae RepID=B1HRT8_LYSSC Length = 294 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 55/293 (18%), Positives = 112/293 (38%), Gaps = 18/293 (6%) Query: 1 MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTESIS-----GLHQHDYYEFTLVLTGRY 55 M P+ + +E L K F V +Y T ++ LH H +F + +G Sbjct: 1 MRLPLTHIKIAKDLQELTLHGSKEFPVALYETTMNMDSMDFLPLHWHKEIQFVYLKSGCA 60 Query: 56 FQEINGKRVLLERGDFVFIPLGSHHQSFY-EFGATRILNVGISKRFFEQHYLPLLPYCFV 114 + ++LE G+ +FI H++ + + + + H + +V Sbjct: 61 KYRVGANVLVLEEGEGLFINTSELHEAKPFQMEHAIVYCINVDPIIIGGHDGSIFMTNYV 120 Query: 115 ASQVYRTNNAFLTYVET-------VISSLNLRETGLEEFV--EMVTFYVINRLRHYREEQ 165 + +L + + L +E + V E++ + + + E+ Sbjct: 121 QPYLTTHRQPYLKLTKELTQKVACMADILQKQEAFYQLKVWRELLYIWEVMLTQSLLTEE 180 Query: 166 VIDDV---PQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQII 222 ++D Q + + LE++ S+ +R ++ G TP + Sbjct: 181 IVDPSIIVQQERAKAMLNFLHTHYQQKITLEDLAKHVYLSRAECSRYFKKVIGLTPFTYL 240 Query: 223 NEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 + R+ + + L +VT IA G+S+ S +I+ FK+ T ++P YRKK Sbjct: 241 LQYRLRKSIELLRDDEQNVTIIAANTGFSTVSYYIEKFKEYTGYSPHVYRKKF 293 >UniRef50_A9KRL7 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KRL7_CLOPH Length = 283 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 56/278 (20%), Positives = 102/278 (36%), Gaps = 14/278 (5%) Query: 14 AREQQLFNGKNFHVFIYN----KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 E + +F + + + H H YE +L G + + G LL++ Sbjct: 6 YHECRQRGTVDFPIEYHYVDHTHPQYEMPFHWHIEYEIIRILDGEFRLFLEGTEYLLKKD 65 Query: 70 DFVFIPLGSHHQSFYEFGATRILNVGIS----KRFFEQHYLPLLPYCFVASQVYRTNNAF 125 D FI G H + + + + F +L + + ++ Sbjct: 66 DVAFIKDGKLHGGSPKDCTYECIVFDFNILRQRSFLTDTFLRKIAHQKISIYPVHNKTCI 125 Query: 126 LTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVE------ 179 + + T+ ++ E G E + L+ ++ + +E Sbjct: 126 TSPLITMFDAIRSEEEGYELSILGSLLLFFAALQKNEYYSKEEEYDLKSQKAIEQLKASL 185 Query: 180 KMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNY 239 ++ + L+ + S +Y R Q Y +TP+ +N RI A Q+ + Sbjct: 186 ELIVTDYAKPLTLQELSRECGLSPKYFCRFFQEYTNRTPIDYLNYYRIEQACYQISQSED 245 Query: 240 SVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 ++TDIAF G++ S FIKTFKK TPK Y+ E Sbjct: 246 TLTDIAFRCGFNDFSYFIKTFKKYKGITPKKYQMMWKE 283 >UniRef50_B4AEM1 Transcriptional regulator n=1 Tax=Bacillus pumilus ATCC 7061 RepID=B4AEM1_BACPU Length = 297 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 55/289 (19%), Positives = 110/289 (38%), Gaps = 19/289 (6%) Query: 4 PVINAPEIATAREQQLFNGKNFHVFIYN-----KTESISGLHQHDYYEFTLVLTGRYFQE 58 + +E + + + +Y+ LH HD ++F +L G Sbjct: 2 NNYHFLIDYNLKELTEHSTTTWSIALYHTKICDHRSGHIPLHWHDEFQFVFILEGEAEFH 61 Query: 59 INGKRVLLERGDFVFIPLGSHHQSFYEFGA-TRILNVGISK------RFFEQHYLPLLP- 110 IN + + L+ GD VFI G H + G L + +S F P + Sbjct: 62 INEETICLKEGDGVFINCGCLHMAKDANGTTCTYLCLNVSPHFITANELFTTFVHPYMHA 121 Query: 111 ---YCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVI 167 + ++ N ++T+ ++ E + + + L + Sbjct: 122 SQTPYILLNRKDHWPNHIYQCIQTIQRLIDETPAYYELELNIQLITMWKCLLQNGFQIKY 181 Query: 168 D---DVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINE 224 D + + + L+++ S+ R + KTP+ +NE Sbjct: 182 DARQHDKNERMKPMLNWIHQHYHEKVLLQDIARAGQLSRSECCRYFKDILKKTPLHYVNE 241 Query: 225 IRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 R+ + L+ T++++T+IA++ G++S S FI FK++ + TP +YRK Sbjct: 242 YRVQQSLILLQETDFNITEIAYKVGFNSTSYFISMFKRIKNTTPLAYRK 290 >UniRef50_A8MEF5 Transcriptional regulator, AraC family n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MEF5_ALKOO Length = 854 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 46/271 (16%), Positives = 104/271 (38%), Gaps = 13/271 (4%) Query: 23 KNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQS 82 ++F + + +H H E LVL G + + LL+ D + I + Sbjct: 12 EDFPIRGSIYSIEGFKVHWHSAVEILLVLQGNVSLGVGDHKYLLKENDLILINYNEIYSI 71 Query: 83 FYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQV------YRTNNAFLTYVETVISSL 136 +L++ I Q+ F + Y+ V+ Sbjct: 72 TRGKEDNLLLSLQIDPVTLSQYDPNFSRLVFDCKSFMYCKDNQEKFDVVRYYMAKVVWEY 131 Query: 137 NLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLK-------STVEKMHDKEQFSE 189 + ++ G + + + L + + ++ + +K + ++ + Sbjct: 132 SKKKPGYQLRIASNIHLLAAHLVNNLTNENLNQLKSEIKDKDLARLKRILSYINENIDKK 191 Query: 190 SALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAG 249 +L+ + S YL+R + G T + IN +R++ A L +N ++T++++E+G Sbjct: 192 ISLKTIAKNEHISYFYLSRFIKDNLGVTFQEYINTLRLDKAVNLLLSSNKTITEVSYESG 251 Query: 250 YSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 +++ LF K FK+ +P Y+K E ++ Sbjct: 252 FANIKLFNKLFKETFGASPLQYKKIHKESSE 282 >UniRef50_C3RLG7 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RLG7_9MOLU Length = 280 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 52/254 (20%), Positives = 101/254 (39%), Gaps = 6/254 (2%) Query: 31 NKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEF-GAT 89 + + S LH H + E V G +I ++ DFV I + H Sbjct: 29 YEGDWHSQLHSHHFTELFYVTKGCGGFKIGADEFNVQENDFVIINPNTMHTEVSRDRNPL 88 Query: 90 RILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEM 149 + + I FE L Y Y+ N L Y+ ++ + ++ + Sbjct: 89 EYIVIAIDGISFEIPEDSLKDYISCNYANYK--NEILFYLNLMVKESQAKNELYDDMCQQ 146 Query: 150 VTFYVINRLRHYREEQVIDDVPQWLKS---TVEKMHDKEQFSESALENMVALSAKSQEYL 206 + ++ + V + ++ ++ D+ E L+ + + ++ YL Sbjct: 147 LMQVLLINILRLNRINVSLTQGKTIRKEIFMIKNYIDRNYHKEITLDTLAEKTHMNKFYL 206 Query: 207 TRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSF 266 + G +P+ + + RI +K L T+ S++ I+ G+SS S F + FKK T+F Sbjct: 207 AHEFKNDVGVSPISYLLQRRIYESKYLLRDTDLSISQISTILGFSSLSYFAQAFKKSTNF 266 Query: 267 TPKSYRKKLTEFNQ 280 +P YRK ++N+ Sbjct: 267 SPLQYRKNHQKYNK 280 >UniRef50_A6M2W7 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M2W7_CLOB8 Length = 283 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 100/279 (35%), Gaps = 16/279 (5%) Query: 11 IATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 + + E+ + + +N S + H H+ E ++ G IN L +GD Sbjct: 1 MHGSFEKTVLESEFPFRLFFNDGYSNTPHHWHEDIEIIYLVEGTLKACINRDTYDLTQGD 60 Query: 71 FVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYL---------PLLPYCFVASQVYRT 121 + I G H F E + + ++ P+ + Sbjct: 61 ILIIGGGEIHCFFKEKKFSNRAVIQFRTSIYDNFLSGTKDTKIIKPMWNQSIHLTMGNEI 120 Query: 122 NNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKST---- 177 + ++ +I+ + E G + ++ + + L Y +Q + Sbjct: 121 HALMERHINEIINEYSKAEEGYKLIIKARLYDLAGILIRYMPKQSYSSEDLSREKERLKK 180 Query: 178 ---VEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQL 234 V + D L+++ S+ Y T+ + G T + +N RI A+ ++ Sbjct: 181 MDSVFQYVDTNYQERIDLDDISKSIGFSKYYFTKFFKENTGVTFLDYLNNYRIKKAEWRI 240 Query: 235 EMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 + ++ +IA+ G++S F + FK + TP YR+ Sbjct: 241 IEEDETIAEIAYNCGFNSIKTFNRLFKNIVGCTPMKYRR 279 >UniRef50_A8RTE5 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8RTE5_9CLOT Length = 310 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 53/276 (19%), Positives = 97/276 (35%), Gaps = 12/276 (4%) Query: 13 TAREQQLFNGKNFHVFIY----NKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLER 68 R + + + ++ H H E LVL G IN ++ L+ Sbjct: 2 DFRYETVIPNDDLPFRMFIFEGRDGNYRVSKHWHQSVELFLVLEGTLDFFINSRQYTLKP 61 Query: 69 GDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTY 128 DFV + H + + I + FE + F A + + Sbjct: 62 NDFVIVNPNEIHSIEC-PDPNITIVLQIPMKSFEGYMSDESRITF-ADKDESQKARLVAL 119 Query: 129 VETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLK------STVEKMH 182 V + + E G V+ + + + ID V K S V + Sbjct: 120 VTAMYRTYEKGEFGYRLKVKSQFMEFLYLIVTEFRIEQIDKVRVQQKRHLDKLSQVTQYM 179 Query: 183 DKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 + E +LE + + + YL+ + Y + ++R+ +A ++L ++ V Sbjct: 180 KENYDKELSLEMVASRFGFTPSYLSHMFREYAQTGYRTYLMDLRVKYAMRELLNSDRYVG 239 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEF 278 DIA + G++ F K FKK P YRK++ + Sbjct: 240 DIALDHGFADARAFAKAFKKRYGCLPSQYRKQMNQK 275 >UniRef50_A8RST4 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8RST4_9CLOT Length = 307 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 48/299 (16%), Positives = 92/299 (30%), Gaps = 27/299 (9%) Query: 1 MMQPVINAPEIATAREQQLFNGKNFHVFIY-----NKTESISGLHQHDYYEFTLVLTGRY 55 M T RE Q +F Y + + H H+ E V +G Sbjct: 1 MALQDCTLNLNRTGRELQPHGTPDFPCAGYSSVYTDSAGDVVPWHWHEDLEIIYVESGHL 60 Query: 56 FQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVA 115 ++ GK + L++G+ + H + E + ++ + +VA Sbjct: 61 KLQVPGKTLHLKQGEGAVVNSNILHFAAAEP-LCELHSLVFHPLLVTGEKDSVFSRRYVA 119 Query: 116 SQVYRTNNAFLTY---------------VETVISSLNLRETGLEEFVEMVTFYVINRLRH 160 + + + + G E V + L Sbjct: 120 PLLQCRSFDICPFDYLAGDLRAGNPAAVFTAAFDAFCGEPLGYEFVVREKLSCICCCLYM 179 Query: 161 YRE-----EQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYG 215 Y + + D + + L + + + R +R Sbjct: 180 YYSHAMDSSKPMPDTDNIRIQKMISFIHEHFQENLDLAQIARAADIGERECLRCFKRAIQ 239 Query: 216 KTPMQIINEIRINF-AKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 +P+Q + + R+ A L + S++ IA G++SPS F + F + TP+ YRK Sbjct: 240 TSPLQYLLKYRVTQGASMLLRSPHSSISSIAGMCGFNSPSNFSQMFVRFFKCTPREYRK 298 >UniRef50_C4ZF37 L-rhamnose operon transcriptional activator n=4 Tax=Clostridiales RepID=C4ZF37_EUBR3 Length = 291 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 53/289 (18%), Positives = 97/289 (33%), Gaps = 21/289 (7%) Query: 6 INAPEIATAREQQLFNGKNFHVFIYNKTESI----SGLHQHDYYEFTLVLTGRYFQEING 61 +N E E + F Y + + LH HD E + G ++ Sbjct: 1 MNILEYENYHEDKTHVELTFPYNTYLCSIPLDFSGVPLHWHDDMELIYIKKGCGHISVDF 60 Query: 62 KRVLLERGDFVFIPLGSHHQS-FYEFGATRILNVGISKRFF---------EQHYLPLLPY 111 K + V I G H Y + N+ S E PLL Sbjct: 61 KEYHVTAPSLVLILPGQLHSIDQYMDESMEYENIIFSLSMLLPGKYDYTKEDFLTPLLAG 120 Query: 112 CF----VASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRL---RHYREE 164 F V + VY + ++ G + +++ + L + Sbjct: 121 RFTVPTVFTPVYPYYEDVVAPIDACDEICKTMPQGYQLYIKSKLYEFFFVLDNRCRNLTK 180 Query: 165 QVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINE 224 + V K + + ++ ++ ++ S+ + R + G + + + + Sbjct: 181 PLKSKKTLDKMKVVLKYVENNYADKISIADIADVAGFSESHFMRYFKETMGTSFVDYLKD 240 Query: 225 IRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 R+ A + L+ ++ SV I+ E G+ S S F + FKK TP YRK Sbjct: 241 YRLTMAARLLQSSDSSVLSISGEVGFESLSYFNRAFKKHYGMTPLQYRK 289 >UniRef50_A4CQ66 Activator protein MtlR n=10 Tax=Bacteroidetes RepID=A4CQ66_9FLAO Length = 292 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 53/290 (18%), Positives = 99/290 (34%), Gaps = 14/290 (4%) Query: 5 VINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRV 64 ++ A E + F K H H E V G ++I Sbjct: 3 MLKLKPAFEAIEPDFGQSFTYQKFDALKPNKNLVWHYHPEIELVYVNGGNGKRQIGSHVS 62 Query: 65 LLERGDFVFIPLGSHHQSFYE--FGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTN 122 +GD + I H F + G T V + F + + + + Sbjct: 63 YYTQGDLILIGSNLPHCGFTDACTGNTSESVVQMKTDFLGSDFFSIPEMRNIRQLFEKAK 122 Query: 123 NAFLTY---VETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVID---------DV 170 + + + + E + + ++N L E Q+++ Sbjct: 123 GGIAFTGSAKKKIGEKIEILEYKSDFQRLLAILNILNELGSTSEYQILNAEHLSVETQSK 182 Query: 171 PQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFA 230 +++ + +LE M L+ + R ++ KT +Q +NE R+ A Sbjct: 183 ENERINSIFNFVKENYREPISLEEMADLTHMTVPSFCRYFKKVTNKTFVQFVNEYRMVHA 242 Query: 231 KKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 L S+T+I FE+G+++ S F K+FK T +P YR +L + Sbjct: 243 SNLLSENEMSITEICFESGFNNFSHFNKSFKAFTGMSPSEYRNQLKSVMR 292 >UniRef50_A6TKQ3 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TKQ3_ALKMQ Length = 282 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 58/273 (21%), Positives = 108/273 (39%), Gaps = 15/273 (5%) Query: 20 FNGKNFHVFIYNKTESISGL--HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLG 77 + ++FH + L H HD YE +L+G I + ++ G V I Sbjct: 10 YPDRSFHFSAREVFGHYTMLSNHFHDQYEIYYLLSGERHYFIKDRIFHVKSGTLVLINRQ 69 Query: 78 SHHQSFYEFGATRILNVG-ISKRFFEQHYL-------PLLPYCFVASQVYRTNNAFLTYV 129 H++ + + SK + + +V + + Sbjct: 70 DVHRTTDADTQDHVRVLLNFSKDYLLSSPYVIALLDGLFMNNNYVIPFLSAEQQYVEVLL 129 Query: 130 ETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVID-----DVPQWLKSTVEKMHDK 184 + +I + + TG + ++ + ++ Y E D S + + + Sbjct: 130 DKMIHEIEHQSTGFQVALQALLMDLLVYTSRYIESNRHDVLAPPSQVHEKISQIVQYINT 189 Query: 185 EQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDI 244 + L ++ SQ YL+R ++ G T ++ IN IRI A++ L TN+ V DI Sbjct: 190 NYQTPLTLSSVAQNFFVSQYYLSRTFKQATGFTFVEYINNIRIREAQRLLRETNHKVIDI 249 Query: 245 AFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 + G+ S S F + FK++T F+P +YR+ TE Sbjct: 250 SEAVGFGSISHFGRVFKEVTRFSPLNYRRLNTE 282 >UniRef50_A6LYV7 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LYV7_CLOB8 Length = 303 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 48/293 (16%), Positives = 100/293 (34%), Gaps = 24/293 (8%) Query: 7 NAPEIATAREQQLFNGKNFHVFIYNKT-----ESISGLHQHDYYEFTLVLTGRYFQEING 61 +E +F + IY + H H +F+ L + I Sbjct: 8 RIEVNDNLQETVKHGSHDFPLAIYTDKFNLFEDGYIRWHWHKEVQFSYSLYDKVVVFIED 67 Query: 62 KRVLLERGDFVFIPLGSHHQSFYEFG-ATRILNVGISKRFFEQHYLPLLPYCFVASQVY- 119 + ++L G+ + I HQ + ++ L+ +++ + Sbjct: 68 EEIILSPGEGIMINSNVLHQIKPYKNIDCMMFSIDFDSTLIGGSEESLIEKKYLSPIIES 127 Query: 120 ------------RTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVI 167 L+++E V + + G E ++ V L +E + Sbjct: 128 NNLKFISLKPDVPWQKRILSHLEQVFILSHEKSYGYELEMKNYLSIVWLNLIKEIKEDIK 187 Query: 168 DDVPQ-----WLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQII 222 +P + K L+++ + S+ R+ +R TP + + Sbjct: 188 ISMPSASNDDERVKMAMQYIQKHYADNIDLDSIARAANISKSECCRSFKRILKVTPFEYL 247 Query: 223 NEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 E R++ A + L S+++I+ + G++ S F K FKK + +P YR K Sbjct: 248 MEYRVSKAAELLLKNKDSISNISLDVGFNGISYFGKVFKKYRNCSPSEYRTKY 300 >UniRef50_A7B0D2 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0D2_RUMGN Length = 270 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 51/250 (20%), Positives = 102/250 (40%), Gaps = 8/250 (3%) Query: 33 TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG-ATRI 91 ++++ H HD++E +L G I G+ L DFV P H S+ E + Sbjct: 24 NDNMTQSHFHDFFELYYLLEGERMHMIEGEIYHLTANDFVLFPPHIMHHSYGEKDMPFKR 83 Query: 92 LNVGISKRFFEQH----YLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFV 147 + + S L FV N L+ + ++ +++ + ++ Sbjct: 84 IVLYFSPDLIANDTICQLLSEKELLFVNEGYIP--NQILSLLLSLTHEIDVPGKYHDAYI 141 Query: 148 EMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLT 207 ++ + E V V+ +H + ++ + + S +L Sbjct: 142 CNQLNGLLLNMLRLDFEAVKSIPKTRSAKAVDYIH-NHYMEDISVNQLAEILYVSPYHLC 200 Query: 208 RATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFT 267 + GKT +Q +N RI A++ + T+Y++T I+ E G+S+ + F +TFKK+T Sbjct: 201 HEFKNATGKTIIQYLNTTRILHAQRLMLETDYNITQISREVGFSNLTHFNRTFKKITGVA 260 Query: 268 PKSYRKKLTE 277 P+ +K + Sbjct: 261 PREKKKLYQK 270 >UniRef50_A6LR84 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=A6LR84_CLOB8 Length = 285 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 46/251 (18%), Positives = 98/251 (39%), Gaps = 16/251 (6%) Query: 37 SGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGI 96 H H++ + + G+ F N K + +GD + I H R + I Sbjct: 33 FKEHWHEHLQVFYFINGKGFLRCNTKSFNIIQGDVIIINSRDLHYLESLNNDLRFYLIRI 92 Query: 97 SKRFF---------EQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFV 147 F ++ PL + + R ++ + ++T+I N +E G E V Sbjct: 93 DLPFLFSDQVDLCQTKYLSPLSENLILFKNLIRNDDEIVRCIKTIIKEYNKKEIGYELAV 152 Query: 148 EMVTFYVINRLRHYREEQVIDD-------VPQWLKSTVEKMHDKEQFSESALENMVALSA 200 + + ++ L ++ + V + + + N+ ++ Sbjct: 153 KANLYNLVVLLIRNYIDKFVTKRQLAFKINNDERFYKVFEFVHSNFNKKISTLNLSNIAH 212 Query: 201 KSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTF 260 S Y R ++ GKT + INE+R+ + + L+ +N ++T++A G++ + F + F Sbjct: 213 VSPYYFCRIFKQITGKTTTEYINEVRLKKSIELLKNSNMNITEVAINCGFNDVNYFSRLF 272 Query: 261 KKLTSFTPKSY 271 KK +P + Sbjct: 273 KKKYGVSPTKF 283 >UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR n=2 Tax=Clostridiales RepID=C4Z204_EUBE2 Length = 277 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 53/269 (19%), Positives = 102/269 (37%), Gaps = 16/269 (5%) Query: 22 GKNFHVFIYNKTESI----SGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLG 77 K+F + ++ + G H H + E + +G I+ +GD V +P G Sbjct: 6 SKDFDIKRIKRSNTSCSTGVGAHVHPFNEIFYLSSGECTSFIDHNIYKFGKGDLVIVPSG 65 Query: 78 SHHQSFYEFGATR-ILNVGISKRFFE----QHYLPLLPYCF---VASQVYRTNNAFLTYV 129 H++ Y + + E Q L+ C V + + + + + Sbjct: 66 CLHRTTYNGKGMHERIVISFRNEATEWIQNQTGKELMENCMKPGVVNIPEKRRDYVVALL 125 Query: 130 ETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVI----DDVPQWLKSTVEKMHDKE 185 + +I + + F+++ ++ + + + DV + V + Sbjct: 126 DKLIFENDSPDELSPAFIKVGLIELLLFIIRCKNYEENVIKEIDVDNRIIQEVATYIYEH 185 Query: 186 QFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIA 245 +LE + S+ YL++ + G + I +RI A L TN S+TDIA Sbjct: 186 YADNLSLEYVADKFNLSRSYLSKKFKTATGFGFKEYIINVRIQNACNLLLETNKSITDIA 245 Query: 246 FEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 FE G++ + F F+K +P YRK Sbjct: 246 FECGFNDSNYFGDAFRKAKGISPHKYRKN 274 >UniRef50_UPI0001C356F7 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C356F7 Length = 268 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 52/250 (20%), Positives = 96/250 (38%), Gaps = 11/250 (4%) Query: 35 SISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGA-TRILN 93 ++ H H +YEF + +G IN +E GD +F+ G H++ Y + Sbjct: 15 HMAESHWHTHYEFYYLYSGHCKIFINHTLYYVEPGDIIFLKPGEIHRTTYHSSPVNERVT 74 Query: 94 VGISKRFFEQ---HYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLE----EF 146 + + + + N + VE +I + ETG + Sbjct: 75 ISFDGEYLDSMKELCGEENVEYIFRNSKVTVPNGNRSRVEELIRRIEYEETGQDGFSPLM 134 Query: 147 VEMVTFYVINRLRHYREEQVIDDVPQWLKSTVE---KMHDKEQFSESALENMVALSAKSQ 203 + + ++ L +E + + + T+E K + LE + LS S Sbjct: 135 KKGCFYELLVSLSRCQEAETDHGRLEIGEETIEAAAKYIYDHYQNPITLEEVAELSHMSP 194 Query: 204 EYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKL 263 Y +R + G + + IRI A + L + SVT+IA G+ + F F+K Sbjct: 195 AYFSRKFKAVTGFGYKEYLTNIRIREASRLLLHSACSVTEIADRCGFGDGNYFGDAFRKA 254 Query: 264 TSFTPKSYRK 273 +P+++RK Sbjct: 255 KGVSPRAFRK 264 >UniRef50_C6JJH4 Putative uncharacterized protein n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JJH4_FUSVA Length = 300 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 53/284 (18%), Positives = 99/284 (34%), Gaps = 20/284 (7%) Query: 10 EIATAREQQLFNGKNFHVFIY-----NKTESISGLHQHDYYEFTLVLTGRYFQEINGKRV 64 +E + F +Y T H H E + G + EI K+ Sbjct: 2 TDENNKELAVHGNYEFPCAVYFSYVSKYTAGEIDWHWHKEIEIINIYQGTLYVEIENKKF 61 Query: 65 LLERGDFVFIPLGSHHQSFYE-FGATRILNVGISKRFF--------EQHYLPLLPYCFVA 115 +L +GD +FI H I++ +K EQ Y+ L C Sbjct: 62 ILSKGDSLFINSEEMHFMKMNTKEECVIISFVFNKSLICGDKGNNIEQKYIDPLINCKEL 121 Query: 116 SQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREE-----QVIDDV 170 S + T + S + G E V + ++ + ++ + Sbjct: 122 SALELTKED-SKKLAQAYYSYSNNILGYEIIVRNILSEILLNIIRKNQKLLEKSSNNSNT 180 Query: 171 PQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFA 230 + + K + +L ++ + + R R G +P++ + + RI A Sbjct: 181 DKERIKRMLAFIYKNYSEDISLADIAKEAFIGEREALRCFARTIGISPIEYLLKYRIYTA 240 Query: 231 KKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 + L + + +I + G++SPS F K F ++ TP+ YRK Sbjct: 241 AEMLRNSEQPIAEICLQTGFNSPSYFSKVFCRMLGTTPREYRKN 284 >UniRef50_C4G478 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G478_ABIDE Length = 299 Score = 200 bits (509), Expect = 5e-50, Method: Composition-based stats. Identities = 46/293 (15%), Positives = 94/293 (32%), Gaps = 22/293 (7%) Query: 1 MMQPVINAPEIATAREQQLFNGKNFHVFIYNK--TESISGLHQHDYYEFTLVLTGRYFQE 58 M ++ RE + +F + ++ T+ H HD E ++ G + Sbjct: 1 MALSYSVDKTDSSGRELLTYGTSDFPIAFFDDDLTKVKVPWHWHDELEIIIITEGSVSVQ 60 Query: 59 INGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRF--------FEQHYLPLLP 110 I +L +G+ F+ G H + + S ++ + P+ Sbjct: 61 IANSSFVLNKGEGYFLNSGILHSAKLLSPKGHQRALIFSPEIAAHNEDIVWKTYIKPIFK 120 Query: 111 ----YCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHY----- 161 S N+ L V + +T V V + ++ Sbjct: 121 KQALPFIKLSPGISWQNSILRLSNDVWLTGAYEKTDYPITVRHNLTKVFSLIKSNIDLIE 180 Query: 162 --REEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPM 219 E + + + + + ++ S R ++ TP+ Sbjct: 181 NETEFTHKTKQDELRIKKILFFIENNYSTTITIADIAKSGDISISSCLRLFKQILKTTPI 240 Query: 220 QIINEIRINFAKKQLEMTN-YSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSY 271 Q + + R+ A ++ + S+ DIA+ G+S + F + FKK TP Y Sbjct: 241 QYLIKYRLQKAVEEFDSLEGRSIGDIAYSCGFSDATYFNRCFKKEFGCTPTEY 293 >UniRef50_C9L4N0 Putative transcriptional regulator n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L4N0_RUMHA Length = 275 Score = 200 bits (509), Expect = 6e-50, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 91/268 (33%), Gaps = 8/268 (2%) Query: 14 AREQQLFNGKNFHVFIYNKTESI----SGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 +EQ+ F +Y E H HD E G Y +N ++ +E Sbjct: 8 LKEQKDHGTSLFPCALYEVCEEKNWSGVPHHWHDEMEILYFSKGSYTLFVNMEQFQIEEK 67 Query: 70 DFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYV 129 F FI G H +T + Y ++ + V Sbjct: 68 CFYFIYPGELHAIVPHSDSTES-ALVFHPSLLGFEYKLFPQCLKPSNPAFSPFEKEYRKV 126 Query: 130 ETVISSLNLRETGLEEFVEMVTFY---VINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQ 186 + F++ F +++ + + D+ T Sbjct: 127 FHIFHQFPEDSLSARLFIQSGIFKMAGILSTFPSLLQTERKTDMRIETIKTALDFLHSHY 186 Query: 187 FSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAF 246 + + ++ +++Y R ++ GK+P+ +NE RI A L+ T+ + ++ Sbjct: 187 QEKLYIRDLALQVNMNEQYFCRFFKKVLGKSPITYLNEYRIKQACILLQTTDLPIMEVGM 246 Query: 247 EAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 + G+ F+K FKK T TP YRKK Sbjct: 247 DCGFFHLGNFMKEFKKYTETTPLQYRKK 274 >UniRef50_A6BDP1 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A6BDP1_9FIRM Length = 321 Score = 199 bits (508), Expect = 6e-50, Method: Composition-based stats. Identities = 46/311 (14%), Positives = 101/311 (32%), Gaps = 43/311 (13%) Query: 6 INAPEIATAREQQLFNGKNFHV-----FIYNKTESISGLHQHDYYEFTLVLTGRYFQEIN 60 I +E + F V I + + H H E T ++G+ +N Sbjct: 4 IQILTEKNKKEVKEHGSYTFPVQVSPEAIQSYEQHSFMWHWHPEIELTWFVSGQMEYVVN 63 Query: 61 GKRVLLERGDFVFIPLGSHHQSF-YEFGATRILNVGISKRFFEQHYLPLLPYCFVAS--- 116 +R ++ G+ +F + H + + ++V +F + +L +V Sbjct: 64 DQRYIISEGEGIFCNSNALHAGYMIDDQDCNYISVTFHPKFIYGYENSILQTKYVDFITS 123 Query: 117 ----------QVYRTNNAFLTYVETVISSLNL-------------------RETGLEEFV 147 N + Y++ + + E + Sbjct: 124 NEFWSSLVLKPEIPWQNEIIEYIKEIYTLTCQVQSSSDAFIPGYEGIAEQPELPDYEFRI 183 Query: 148 EMVTFYVINRLRHYR----EEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQ 203 ++ + +RL + ++ + + E +LE++ A + + Sbjct: 184 HLLLCEIWHRLYLHYVQIAQDTPHPQKHLQRLKDILSYLQEHASEELSLEDIAAHAGLCK 243 Query: 204 EYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKL 263 R ++Y T + RI + L ++T IA G+SSP+ + + FK+ Sbjct: 244 SECCRFFKKYMRMTIFDYLLSTRIQNSIPLLMDGE-NITTIAGLVGFSSPAYYGQIFKRY 302 Query: 264 TSFTPKSYRKK 274 +P Y+K Sbjct: 303 IGMSPSQYKKN 313 >UniRef50_C4ZAF9 2-isopropylmalate synthase n=2 Tax=Eubacterium RepID=C4ZAF9_EUBR3 Length = 292 Score = 199 bits (508), Expect = 8e-50, Method: Composition-based stats. Identities = 48/287 (16%), Positives = 100/287 (34%), Gaps = 23/287 (8%) Query: 10 EIATAREQQLFNGKNFHVFIYN----KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVL 65 +E + Y+ K +H HD E V G+ I+G+ + Sbjct: 1 MYFELKENRPHGTPENPFSQYHISDVKRAFQIPVHWHDELEIIYVKQGKLHVTISGENYI 60 Query: 66 LERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYC----------FVA 115 D + GS H G + L+ ++ Sbjct: 61 GSPKDAFVVSPGSLHLMGSPTGDADYYTFLFPLEYISFQTDDLMEKSILSPLKRGRLMIS 120 Query: 116 SQVYRTNNAFLTYVETVISSLNLRETGL--------EEFVEMVTFYVINRLRHY-REEQV 166 Q+ T + + ++ + + ++ I ++ + Sbjct: 121 PQINDTAADICERLIEINEQISGKNAEKTDAANIEAQFETKITLIKFIRKMWRNGLILEN 180 Query: 167 IDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIR 226 + + + + E +L+ A S++Y++R + ++ T Q +N +R Sbjct: 181 GTNGTNTTEKEMITYIRQNYTREISLKEFGAQFHLSEKYISRYFKEHFHITLSQYVNHLR 240 Query: 227 INFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 + A++ LE + SVT++A +GY + S FI++FKK+ +P YR Sbjct: 241 LEHARQLLEESTASVTEVAMCSGYQNVSYFIRSFKKMYGVSPLKYRN 287 >UniRef50_C5EQL5 Transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQL5_9FIRM Length = 290 Score = 199 bits (508), Expect = 8e-50, Method: Composition-based stats. Identities = 57/267 (21%), Positives = 106/267 (39%), Gaps = 13/267 (4%) Query: 23 KNFHVFIYNKTESIS--GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH 80 + + ++ S H H YYE +L+G+ I+ L+ GD V IP H Sbjct: 19 NSIQISRIRRSSSYVMKRPHYHSYYEIYYLLSGQCRMFIDQDIYYLKPGDAVIIPPLQIH 78 Query: 81 QSFYEFG-ATRILNVGISKRFFEQHYLPLLPYCF---VASQVYRTNNAFLTYVETVISSL 136 ++ YE G ++ +K + + F + +E ++S L Sbjct: 79 RALYEEGLQAERYDMYFTKEEADAFHASCGREGFERVFLNPRIAIPQPLRPGIEGLLSHL 138 Query: 137 NLRETGLEEFV----EMVTFYVINRLRHYREEQVIDDVPQWLKSTVEK---MHDKEQFSE 189 + + + + + F ++ + ++ Q D ++ + K + + Sbjct: 139 SHENGQEDAYSHVQQQSLLFQILVLIGRCQDTQQEKDSLNDSEAAIVKAARYINLQYREH 198 Query: 190 SALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAG 249 L+ M A+S S Y +R + G + +N IR+ A L T+ +VT IA G Sbjct: 199 LTLDAMAAMSNMSPTYFSRKFRASTGFCFKEYVNYIRVQKASDLLRNTDGTVTSIAIACG 258 Query: 250 YSSPSLFIKTFKKLTSFTPKSYRKKLT 276 +S + F FKKLT +P+ YR + Sbjct: 259 FSDGNYFGDVFKKLTGLSPREYRNGIR 285 >UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LA91_9FIRM Length = 288 Score = 199 bits (507), Expect = 8e-50, Method: Composition-based stats. Identities = 47/289 (16%), Positives = 94/289 (32%), Gaps = 24/289 (8%) Query: 10 EIATAREQQLFNGKNFHVFIY----NKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVL 65 I E F + +Y H H+ E+ G + G+ Sbjct: 1 MIPIYHENNTHGTAVFPLQVYSHHDKDGFFSVSQHWHEELEWICAEHGVLNLTVRGRSFT 60 Query: 66 LERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVAS--------- 116 L G+F FI G H+ G + + + + + + F+ Sbjct: 61 LHPGEFCFINSGELHEIKS-GGPSLHHAIVFNPDILDFTLYDICQHSFIRPVTSGNLIFP 119 Query: 117 -----QVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRH-----YREEQV 166 + L +++ +I + + +++ ++ Sbjct: 120 TLPSVFSPEESQMILFHMQEIIRLYHTLPSCASLSIKIHILQILELFFQADCFLENTISS 179 Query: 167 IDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIR 226 + Q V + + +L ++ + S Y ++ GK P+ INE R Sbjct: 180 KEKDSQNKLKKVIEYIHENYAGPISLPDLAKICFMSPNYFCHYFKQEIGKPPIAFINEYR 239 Query: 227 INFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 I A + L + V+ +A G+ + S FI+ F++ + TP YR L Sbjct: 240 IQKACQILTDSELPVSQVAISVGFDNFSYFIRKFREYKNVTPTEYRSHL 288 >UniRef50_C7GFI0 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C7GFI0_9FIRM Length = 291 Score = 199 bits (507), Expect = 9e-50, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 96/260 (36%), Gaps = 8/260 (3%) Query: 20 FNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSH 79 F + + Y + S H H + E V++G+ I V + D + I Sbjct: 18 FKLRYISISKYE-GDWQSHPHTHQFSELFYVISGKGVFYIENDTVSVCADDLIIINPHIE 76 Query: 80 HQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRT---NNAFLTYVETVISSL 136 H + ++ Y F+ + + +I Sbjct: 77 HTEKTMSNDPMTY-IVFGVEGLAFYFNSQNAANPKGYSYYNYGSAKTHFINFSQIMIKEF 135 Query: 137 NLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTV---EKMHDKEQFSESALE 193 N R+ G E + ++ + + VI D + +K D L+ Sbjct: 136 NARKPGFEAICHGLLQVLLVYITREQHLSVISDTTLQISKECFVAKKYIDANYAKNITLD 195 Query: 194 NMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSP 253 + ++ ++ YL+ + Y G +P+ + E R+ +K+ L ++ S+ ++A G+SS Sbjct: 196 LLAEITHINKFYLSHSFTEYVGTSPINYLMETRLAASKELLLSSSRSIAEVASSTGFSSQ 255 Query: 254 SLFIKTFKKLTSFTPKSYRK 273 S F + F+K T +P YRK Sbjct: 256 SYFSQIFRKNTGMSPLQYRK 275 >UniRef50_D2QN46 Transcriptional regulator, AraC family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QN46_9SPHI Length = 288 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 49/276 (17%), Positives = 100/276 (36%), Gaps = 20/276 (7%) Query: 21 NGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH 80 + ++F + N LH H + TL+ G + K D + + H Sbjct: 12 DDRSFRIDQDNAPYFYGQLHFHPEIQLTLIQQGEGTLIVGDKIDRFNPYDVLLLGANLPH 71 Query: 81 -----QSFYEFGATRI---LNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYV--E 130 +Y+ +TR ++V E+ L L + + + + E Sbjct: 72 VLRSDTDYYQPESTRRATSVSVLFKPEHLEKTMLNLPETRHLTTLLQEAQHGVRLRCGTE 131 Query: 131 TVISSLNLRETGLEEFVEMV-TFYVINRLRHYREE---------QVIDDVPQWLKSTVEK 180 ++ L F +++ V++ L E Q Q V Sbjct: 132 NALTQLLEDIPEKRPFEQLLGLLQVLDNLAANPEREVLSATAYAQPQRPDDQRRLEQVFS 191 Query: 181 MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYS 240 + S +L+++ ++ + R +++ KT Q++NE+RI A + L + + Sbjct: 192 YILQRYASPISLDDVANVANLTPGAFCRFFRQHTRKTFSQLLNEVRIEHACRYLRESQEN 251 Query: 241 VTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 ++ IA GY++ S F + FK++ P Y + Sbjct: 252 ISQIALNCGYTNLSNFNRQFKEIVGMPPGEYIRSYR 287 >UniRef50_C6IZJ5 Predicted protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZJ5_9BACL Length = 310 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 48/268 (17%), Positives = 93/268 (34%), Gaps = 10/268 (3%) Query: 15 REQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFI 74 Q + IY T H H EF VL+G +N + LL +GD V Sbjct: 40 FYQNWKLDPELPMDIYQSTNITFYPHFHAEIEFIYVLSGTIRIGVNEEIRLLRQGDMVIC 99 Query: 75 PLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAF---LTYVET 131 H + I+ + + + F + + T ++ Sbjct: 100 GSNDIHYFDSRELESEIIILICKPEWITMTKSWPSDFRFASPYIPAGTPGLETVKTILDE 159 Query: 132 VISSLNLRETGLEEFVEMVTFYVINRLRH-------YREEQVIDDVPQWLKSTVEKMHDK 184 +I + ++ G ++ + L+ R + + + + + Sbjct: 160 LIREKDEKKPGYPLLLKAGILKLCGSLQRAVDTLPMDRTTKEKYESRRARMQQILSYIED 219 Query: 185 EQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDI 244 E ++ M + + +R+ + G +N +R+ A+ QL ++ S+ +I Sbjct: 220 HYREELNVKVMAKRFSMEPSHFSRSFKAAIGMNFKTYLNTVRVLSAEHQLLTSDLSIMEI 279 Query: 245 AFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 A E G+SS F + FK+L P S R Sbjct: 280 ALECGFSSIRTFNRVFKELRGTVPSSLR 307 >UniRef50_A8RUK1 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RUK1_9CLOT Length = 334 Score = 198 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 50/296 (16%), Positives = 97/296 (32%), Gaps = 24/296 (8%) Query: 2 MQPVINAPEIATAREQQLFNGKNFHVFIYNK-----TESISGLHQHDYYEFTLVLTGRYF 56 M I E + F V + ++ S H H E TL+ G Sbjct: 32 MPSKIQIITNEHQEELKEHGTYEFPVLVSDEALSRFYTSSFQWHWHTEIELTLITEGTMV 91 Query: 57 QEINGKRVLLERGDFVFIPLGSHHQSFYEFG-ATRILNVGISKRFFEQHYLPLLPYCF-- 113 +IN + G +F + H E G R +++ R + + + Sbjct: 92 YQINDQIFYPRAGQALFGNSNTMHTGRMENGRDCRYISITFHPRLLYGYQGSRIASRYTD 151 Query: 114 -----------VASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHY- 161 + + +E +I +LR E ++M F L + Sbjct: 152 PLMENAALPAVCFDLSQEWHGEAVGLLEDIIRIDSLRYDTYEMDIQMDLFRFWKLLYLHC 211 Query: 162 ----REEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKT 217 Q + + S+ L+++ + R + Y ++ Sbjct: 212 RPDREPAHTAGRKNQERIRQMLSFIHENYQSDITLDDISRHIHICKSECCRVFKGYMKES 271 Query: 218 PMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 + + + RI + + ++T+ A AG++ P+ F K F K+ +P+SYRK Sbjct: 272 LFEYLLKYRIEKSIPDVLEGKLTMTETAIRAGFTDPNYFSKVFHKIKGCSPRSYRK 327 >UniRef50_C0EGR3 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGR3_9CLOT Length = 345 Score = 198 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 57/267 (21%), Positives = 105/267 (39%), Gaps = 21/267 (7%) Query: 32 KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRI 91 + H HDY+E V +G F G+ + L +GD + + HQ + I Sbjct: 78 QPPKQYVWHNHDYFEIIYVHSGSCFNRFQGETIKLCKGDILLLNPTILHQIYALHEEDHI 137 Query: 92 LNVGISKRFFEQHYLPLLP-----YCFVASQVYR-------------TNNAFLTYVETVI 133 N+ +SK FE LL F + Y+ N+ + ++I Sbjct: 138 FNIMLSKSLFEGSMWQLLSGNKIINNFFVNYFYQMNKTKDYVHFRCSQNHLIEETITSLI 197 Query: 134 SSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDK---EQFSES 190 + ++ + ++ + L EQ + K + + + Sbjct: 198 AEYLGKKPAYYQVIQSYLIILFAYLSRIYSEQHFIEQQDLEKIGILPDIISFIAQNYQSV 257 Query: 191 ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGY 250 L + + S Y +R + + GKT +I+++ ++N AK+ L TN ++TDIA + G+ Sbjct: 258 TLTEIQNVFNYSSGYTSRLIKHHTGKTFSEIVHDFKLNHAKELLVSTNLNITDIAEKIGF 317 Query: 251 SSPSLFIKTFKKLTSFTPKSYRKKLTE 277 + K FKK TP YR+ + + Sbjct: 318 NDSHYLNKVFKKRFGITPTQYRRGMKK 344 >UniRef50_C5EE80 Helix-turn-helix domain-containing protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EE80_9FIRM Length = 323 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 54/298 (18%), Positives = 89/298 (29%), Gaps = 24/298 (8%) Query: 4 PVINAPEIATAREQQLFNGKNFHVFIYNKT-----ESISGLHQHDYYEFTLVLTGRYFQE 58 + E F + +Y H H EF VL G + Sbjct: 2 QLNYLEVNGNLEEITCHGSPAFPMEVYLDNLDLYPNRFIPWHWHKELEFVYVLEGTIEFQ 61 Query: 59 INGKRVLLERGDFVFIPLGSHH----------QSFYEFGATRILNVGISKRFFEQHYLPL 108 ++ G +P H + A L G+S E+ Y+ Sbjct: 62 TGVSTYVIGSGQGGLVPSNMLHMVSPYHRQHGSIYCAVLADSYLLHGLSGGLIEEQYISA 121 Query: 109 L----PYCFVASQVYRTNNAFLTYVETVISSLNLRETGL----EEFVEMVTFYVINRLRH 160 L F + L + + R G + V+ + L Sbjct: 122 LFRPETDFFFLDGTSPWHAGVLACIHEMYQCDCSRPRGYLWKLQILVQQAGLILFENLDM 181 Query: 161 YREE-QVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPM 219 +E + D + KE LE++ + S R + ++P+ Sbjct: 182 KQEPCPSVHDSRYQRVRCCLEYIHKEYAGRLRLEDIARAANVSVSECCRDFKEVLSQSPV 241 Query: 220 QIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 + R+ + L ++ SV +IA G+S S F TF + TP YRK L E Sbjct: 242 DYLISYRVRMGEYMLAHSDKSVLEIALAVGFSGSSHFSNTFCRYMGCTPLYYRKHLME 299 >UniRef50_C0EDY4 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDY4_9CLOT Length = 345 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 45/265 (16%), Positives = 100/265 (37%), Gaps = 21/265 (7%) Query: 31 NKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATR 90 H HD++E + V G + I G+++ V + + H+ F Sbjct: 74 PARNPNPYPHNHDFFEMSYVYKGTFHNIIGGQQIDQPEDSLVLLSPQAKHRCFTRSSEDL 133 Query: 91 ILNVGISKRFFEQHYLPLLPYC-----FVASQVYRT-----------NNAFLTYVETVIS 134 + N+ I + E+ ++ +L F +Y +NA + ++I Sbjct: 134 VFNILIKRELIEKIFVQMLSESESVCRFFLDSLYNVRQKQPYLFFSCDNALTELIHSIIE 193 Query: 135 SLNLRETGLEEFVEMVTFYVINRLRHYR----EEQVIDDVPQWLKSTVEKMHDKEQFSES 190 ++ + ++ + ++L EE + L +E ++ S Sbjct: 194 EYFQQQDFYQSIIQAKLIELFSKLSRLHQKNAEETPAETSNFQLILQIEDYIERHY-STV 252 Query: 191 ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGY 250 L ++ + YL+R Q+ + + ++ +IR+ A + L ++ + + GY Sbjct: 253 TLSSIAEHFNYTPSYLSRLIQKQFNQKFSCLVQDIRLKHACRYLAHSSLPIDQVVEIVGY 312 Query: 251 SSPSLFIKTFKKLTSFTPKSYRKKL 275 + S F + FK+ + +P YRK Sbjct: 313 NDVSHFYRVFKQKHNVSPNQYRKSH 337 >UniRef50_A8RL67 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RL67_9CLOT Length = 272 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 49/247 (19%), Positives = 104/247 (42%), Gaps = 4/247 (1%) Query: 33 TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG-ATRI 91 +++S H HDY+E + G F I + + G+F+ H S+ + + Sbjct: 17 NDNMSKSHYHDYFELYYLEEGERFHIIQDRLYCIHPGEFLIFSPYVMHHSYGQENVPFKR 76 Query: 92 LNVGISKRFFE--QHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEM 149 L V SK + Q L V R ++ ++ + + E+++ Sbjct: 77 LLVYFSKEEVDSVQLLKVLEKGTGVYKPDQREKQVVHRMLDDLLKEQDDPQAYHEDYIHT 136 Query: 150 VTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRA 209 + + + + V + + + +H + + +++ + +S S YL R Sbjct: 137 LLNMALLTIARNIQTPVKPEKRNRITDVISYIH-QNYQEDISIDQLAQMSYVSPYYLCRE 195 Query: 210 TQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPK 269 +RY T +Q +N R+ A++ TN ++T+I+ + G+S+ + F + FK + TP Sbjct: 196 FKRYTNSTIIQYVNVTRVMNAQRMFMETNKNITEISRDTGFSNITHFNRVFKSVMGMTPS 255 Query: 270 SYRKKLT 276 ++RK Sbjct: 256 NFRKMYK 262 >UniRef50_A6VUH3 Cupin 2 conserved barrel domain protein n=2 Tax=Marinomonas RepID=A6VUH3_MARMS Length = 316 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 49/296 (16%), Positives = 103/296 (34%), Gaps = 23/296 (7%) Query: 4 PVINAPEIATAREQQLFNGKNFHVFIYNKTESIS-----GLHQHDYYEFTLVLTGRYFQE 58 + RE +F Y++ S H HD E LV+ G E Sbjct: 2 QIYKIETEENGRELTTHGSHDFPCESYDEHFSHFVGGEVPWHWHDEIEVVLVIEGATKVE 61 Query: 59 INGKRVLLERGDFVFIPLGSHHQSF-YEFGATRILNVGISKRFF---------EQHYLPL 108 +++ G+ VFI + H+ Y RILNV S + ++H LP+ Sbjct: 62 CINSSDIVKTGEMVFINANTLHKLTNYGTEDCRILNVVFSPKMLGGMGFGLIYKKHVLPV 121 Query: 109 LPYCFVASQVYR----TNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREE 164 + + + + + + + + + E ++ + +++ Sbjct: 122 INNKELLFYKFSGAKAWHEQAINELAAAFNVWKEQGSDREFYMNIALMKFWYIFCTNQQD 181 Query: 165 ----QVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQ 220 + ++ ++ ++ + S+ R + +P Sbjct: 182 ITATHNTAKANEKRIQSLLNFIHSNYEERISIADISEAANISESECYRIFRNALNCSPNS 241 Query: 221 IINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 + R+ + + L +N + DIAFE+G++ + F K FK + TP +RK + Sbjct: 242 YLLNYRLRKSVQLLTESNKQIADIAFESGFNCSAYFAKKFKLAFNVTPMQFRKNYS 297 >UniRef50_C0EDH7 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDH7_9CLOT Length = 331 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 65/296 (21%), Positives = 118/296 (39%), Gaps = 24/296 (8%) Query: 1 MMQPVINAPEIATAREQQLFNGK-----NFHVFIYNKTESISGLHQHDYYEFTLVLTGRY 55 M++ + T Q K + H K S LH HDY+E V +G Sbjct: 29 MLKKLARKNGFYTVPIQFYLTKKEQVAVDLHGLPNAKNAEQSLLHNHDYFELMYVRSGSC 88 Query: 56 FQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVA 115 F +++ L +GD + + + H F + N+ +S+ FEQ LPLL + Sbjct: 89 FNVFESEKITLHQGDILLLNPNAKHDPFTTSEGDCLFNIMLSRELFEQSMLPLLSDNHLI 148 Query: 116 SQVY------------------RTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINR 157 S + R A ++E +I +E G + +E + R Sbjct: 149 SNFFVDYMYHINKTQDYLYFPSRNTKAISPFLEEIILEYINKEQGYVQVIESALVILFAR 208 Query: 158 L-RHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGK 216 L R + +E I+ ++ + ++ L ++ A S YL++ +++ G+ Sbjct: 209 LGRIFAQENHIESSVSNKLIVDVIVYLNQHSADVTLSSLAAEFGYSSGYLSKLIRKHTGQ 268 Query: 217 TPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 + I++ ++ AK LE T +S +IA G+ S ++F+ TP S R Sbjct: 269 SFTDILSNFKLEKAKHLLETTAHSTDEIAQLTGFHDASYLSRSFRSKYGVTPSSCR 324 >UniRef50_C0CH60 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CH60_9FIRM Length = 278 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 54/253 (21%), Positives = 104/253 (41%), Gaps = 7/253 (2%) Query: 29 IYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGA 88 + + + S H H + E V++G + ++ GD V IP H G Sbjct: 26 VKDDKDWNSVFHTHHFTELFYVVSGEGKFLFRNETHHIKTGDLVIIPPYLEHTEQSVKGK 85 Query: 89 T-RILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFV 147 + +GI K F F +R ++ ++ + + G E Sbjct: 86 SLEYYVIGIDKISFLAENGQTGIQAFCN---FRDQSSVSDIFAQMLYEMRNDDYGSEIIC 142 Query: 148 EMVTFYVINRLRHYREEQVIDDVPQWLKS---TVEKMHDKEQFSESALENMVALSAKSQE 204 + + +I R+ + I + + +++ D L+ + +L+ ++ Sbjct: 143 QNLLEILILRIIRSQRLIPISINSERMTKECAQIKEYLDTNYTERITLDTLTSLTHMNKY 202 Query: 205 YLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLT 264 Y+ + +Y G +P+Q +N R+ A L T++SV+DIA G+SS S F ++F+K Sbjct: 203 YMAHSFAKYAGLSPIQYLNRRRLKIACTLLRDTDHSVSDIASSTGFSSQSYFTQSFRKYY 262 Query: 265 SFTPKSYRKKLTE 277 TP YR++ E Sbjct: 263 GMTPLQYRQQNAE 275 >UniRef50_P96660 Uncharacterized HTH-type transcriptional regulator ydeC n=3 Tax=Bacillus RepID=YDEC_BACSU Length = 291 Score = 197 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 53/286 (18%), Positives = 103/286 (36%), Gaps = 19/286 (6%) Query: 7 NAPEIATAREQQLFNGKNFHVFIYNKT-----ESISGLHQHDYYEFTLVLTGRYFQEING 61 N +E V Y T LH HD +F L+L G +IN Sbjct: 3 NFVIDQNLKELTEHRTVELPVACYKTTINQNINGYIPLHWHDEIQFVLILKGIALFQINE 62 Query: 62 KRVLLERGDFVFIPLGSHHQSFY-EFGATRILNVGISK----------RFFEQHYLPLLP 110 +++ + GD +FI G H + E + + +S + + + Sbjct: 63 EKIEVHEGDGLFINSGYLHMAEEKEGSDCTYICLNVSPHFVLSQELYSSYVQPYMFSTNL 122 Query: 111 YCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDV 170 + + L V+ + + + + E + M + L + D Sbjct: 123 PYLFLAGNQQWAKNILDAVKKINQLIQQKTSLYEIDITMQLTLMWKNLVVNGFQLEYDQS 182 Query: 171 ---PQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRI 227 + + LE++ S+ R +R KTP++ + + RI Sbjct: 183 EMIKSHRMKQMLNWIHLHYVEKITLEDIAKAGQLSRSECCRYFKRMLNKTPLRYVMDYRI 242 Query: 228 NFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 + L+ +VT+++++ G++S S FI F++ + TP SY+K Sbjct: 243 QKSLLLLQHPESNVTEVSYQVGFNSTSYFISKFQQAMNMTPLSYKK 288 >UniRef50_C0ECP2 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0ECP2_9CLOT Length = 327 Score = 197 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 46/295 (15%), Positives = 113/295 (38%), Gaps = 20/295 (6%) Query: 3 QPVINAPEIATAREQQLFNGKNFHVFI--YNKTESISGLHQHDYYEFTLVLTGRYFQEIN 60 +++A +I E+ N + + H+H ++EF V +G++ ++ Sbjct: 32 PWIVSADDIFAPHEEVAINVHHLPSWYGAPQPNTHPMKPHKHIFFEFVYVYSGQFHSVVD 91 Query: 61 GKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLP-----YCFVA 115 + ++L + + + H + E + +LN+ I + ++ + L+ + F Sbjct: 92 SESLVLGQDQVILLNPNQVHAPYIERDSDLVLNILIKQPLIDRTFASLISRDNILFDFFY 151 Query: 116 SQVYRTN-----------NAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREE 164 + +Y + + +++ R E+ + + L E Sbjct: 152 NYIYGISGASNYLMVDRTPRVDQIISSIVEEYCERRPLFEQSLIGWIINLFTELARVYSE 211 Query: 165 QVIDDVPQWLKSTVEKMH--DKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQII 222 + + + K + ++ +E ++ L + S YL+ ++ G+T +I+ Sbjct: 212 RKTNQPARPAKPGMAEIIGFIRENYATVTLSETAKTFSYSPSYLSYLIKKETGQTFKEIV 271 Query: 223 NEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 + RI A L+ T ++ I+ G+ K FK+ +P YRK+ + Sbjct: 272 RDFRIESACNFLKNTQLTLEQISEILGFQDSFYIAKVFKQRYGISPSEYRKRSRQ 326 >UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=Clostridium RepID=A3DHI5_CLOTH Length = 302 Score = 197 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 47/269 (17%), Positives = 100/269 (37%), Gaps = 19/269 (7%) Query: 27 VFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEF 86 + ++ T ++H+ +E + G+ EI G + D + I H+ + Sbjct: 30 IERFHDTSWHMEPNKHECFEMVYIKRGKAVFEIAGYPAEIGPNDIIIIKPNQPHKFIVKS 89 Query: 87 GA-TRILNVGISK-RFFEQHYLPLLPYCF-----------VASQVYRTNNAFLTYVETVI 133 + + + F+ Y + F + N + + ++ Sbjct: 90 ESGCEFIVLSFKFVNRFDGQYSDVSLENFLDFVSGKETGPFITLKVSQKNDIIVLLNRIL 149 Query: 134 SSLNLRETGLEEFVEMVTFYVINRLRHYRE---EQVIDDVPQWLKSTVE---KMHDKEQF 187 + G E ++ + + + E I + +K ++ + Sbjct: 150 KERENPDIGSEFLNYLLVMELFVLISRALKMEWENSIKNKSPKIKELIQASVNYINNNYE 209 Query: 188 SESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFE 247 + +L+++ S Y TRA + G +P+ + +IR+ AK+ L+ T+ ++DIA Sbjct: 210 RDISLKDIARYVFLSTSYFTRAFKEEMGISPINYLLKIRVERAKELLKDTDNRISDIALS 269 Query: 248 AGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 G+S+ F FKK TP YRK + Sbjct: 270 VGFSNQQRFNDIFKKYVKLTPLQYRKNVQ 298 >UniRef50_C5RE27 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RE27_CLOCL Length = 820 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 48/278 (17%), Positives = 106/278 (38%), Gaps = 14/278 (5%) Query: 14 AREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVF 73 + + + + + I+ + H HD E VL G+ I+ LE+G+ Sbjct: 1 MKYEIINYDEKLPIKIFVAKLNNYPPHWHDEIEIVKVLEGKIKVSISESVCFLEKGEMAI 60 Query: 74 IPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQV-------YRTNNAFL 126 I HQ + + + I+ +F E H+ L F + + + Sbjct: 61 IKHKEIHQIQSLENESLLQIIQINYKFMETHFPHLSRISFENNLLNISKDINLNVASNLK 120 Query: 127 TYVETVISSLNLRETGLEEFVEMVTFYVINRLRHY-------REEQVIDDVPQWLKSTVE 179 + +I+ L++R G E V + V + +E +++ + Sbjct: 121 QLINEMINYLSVRNQGYEFHVISAIYKVFGSIISNVPYTISTEDELEKNNITFNRMKKII 180 Query: 180 KMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNY 239 + ++ +E + + + ++ Y+ +++ G + Q I +R+N A + L Sbjct: 181 EYIEQNYMNEININTLAEILHLNKYYIAHFFKKHTGLSLGQYITNLRMNKATELLIKNED 240 Query: 240 SVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 S+T+I G+ + F K F+++ +P Y+ E Sbjct: 241 SITNIILSCGFKNIKYFYKVFREVYKCSPLEYKNNRQE 278 >UniRef50_Q5WL10 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WL10_BACSK Length = 298 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 101/277 (36%), Gaps = 14/277 (5%) Query: 12 ATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDF 71 +++ + F + + H H+ E VL+G E + L++G Sbjct: 6 PKLQKEPYYPVVKF-YYYKEWRQFEMKFHSHEAAECMHVLSGSCKVETDEGSYQLKKGQI 64 Query: 72 VFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVA------------SQVY 119 +F+ G+ H+ R+ NV S + P C + Sbjct: 65 IFLDAGTRHRLIV-SERCRMFNVEFSFEQGCTAFPPFFKLCKENRALGNMVNKQASQLLL 123 Query: 120 RTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVE 179 + + +I ++ + + V+++ + R+ E +V + Q Sbjct: 124 HDTDDTYQCLRRLILEVDKKSEQTDFMVQLLLSEYLIRIAELAEAKVAEPDQQAYVKRAL 183 Query: 180 KMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNY 239 + E ++ ++ YL R + + GK+ + + RIN AK L+ T+ Sbjct: 184 AYIHQNYDREVSVADIANSVHLHPGYLQRVFKAFTGKSIHEFLISYRINKAKAMLKQTDI 243 Query: 240 SVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 S+TDI G +S F TFKK TP YRK+ Sbjct: 244 SITDIPHYIGMNSQQYFSTTFKKHVKCTPSEYRKRHQ 280 >UniRef50_Q65MB5 Probable transcriptional regulator n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65MB5_BACLD Length = 281 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 55/271 (20%), Positives = 95/271 (35%), Gaps = 13/271 (4%) Query: 21 NGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH 80 + + ++ H H+ YE +L+G IN E+G + I H Sbjct: 11 HSFSIQYMQRKGFTEMNAPHVHEGYELYYLLSGERTYFINQSVYTAEKGTMIIINPHDLH 70 Query: 81 QSFYEF-GATRILNVGISKRFFE-------QHYLPLLPYCFVASQVYRTNNAFLTYVETV 132 ++ + + S F E LP + R A + + Sbjct: 71 RTSSTEVQEFERILINFSHDFIEPLLKCSHYRLLPFPENQNFIAFSLREQAAVEHMLMEM 130 Query: 133 ISSLNLRETGLEEFVEMVTFYVINRLRHY-----REEQVIDDVPQWLKSTVEKMHDKEQF 187 L++ G E+ V + F ++ + R + S + + Sbjct: 131 KKECKLKKEGHEDVVRALLFQLLFTIYRSLAGGGRNQTRPLHPMDEKISEIASYINCSFQ 190 Query: 188 SESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFE 247 L+ + S YL+R ++ G + I IRI AKK+L T+ + DIA + Sbjct: 191 ETMTLDGLAGQFYISPSYLSRVFKKVTGFHLQEYIRHIRIREAKKRLRDTDEKILDIAAD 250 Query: 248 AGYSSPSLFIKTFKKLTSFTPKSYRKKLTEF 278 G+ S F K FK++ P YRKK + Sbjct: 251 TGFKHISHFNKVFKEIVGIPPLQYRKKSRDI 281 >UniRef50_C8NIW5 AraC family transcriptional regulator n=2 Tax=Granulicatella RepID=C8NIW5_9LACT Length = 282 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 51/255 (20%), Positives = 104/255 (40%), Gaps = 5/255 (1%) Query: 31 NKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG-AT 89 ++ S LH H + E V+ G+ I +R ++ DFV I H Sbjct: 28 YDSDWHSTLHTHPFTELFYVIDGKGEFIIQHQRFPVKANDFVIINPQVEHTEVSSPDSPL 87 Query: 90 RILNVGISKRFFEQHYL-PLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVE 148 + VGI F + F + L Y+ ++ + + Sbjct: 88 EYIVVGIQGLSFSNLTPVDQGGHPFSFFNLRDEQKDILRYLNAMVQEATNQALSYDLVCH 147 Query: 149 MVTFYVINRLRHYRE---EQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEY 205 + ++ ++ ++ E + ++ LE + +++ S+ Y Sbjct: 148 NLLEILLIKILRHQHFDLEVGSHSKTTKDIAFIKHYLKTYYRESIQLEALASMTHLSRFY 207 Query: 206 LTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTS 265 ++ + ++ G +PM+ + IRI +K L TNYS++ +A G+++P+ F K F+K+T Sbjct: 208 ISHSFKKEVGMSPMEYLMTIRIKESKILLRTTNYSISQVADIVGFTTPTYFSKQFRKITG 267 Query: 266 FTPKSYRKKLTEFNQ 280 +P YR+K + +Q Sbjct: 268 ISPTDYREKYQKESQ 282 >UniRef50_B6FJS0 Putative uncharacterized protein n=2 Tax=Clostridium RepID=B6FJS0_9CLOT Length = 313 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 56/295 (18%), Positives = 108/295 (36%), Gaps = 28/295 (9%) Query: 9 PEIATAREQQLFNGKNFHVFIY--------NKTESISGLHQHDYYEFTLVLTGRYFQEIN 60 E++ E +N F V ++ +H HD +FT V G ++ Sbjct: 18 EEVSKMHECPNYNDCAFPVSMHTITKYDIFPNGRGFHDVHWHDEIQFTYVSKGELTMQVE 77 Query: 61 GKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFF---------EQHYLPLLPY 111 G+ +L+ G+ +FI G H + + ++ + + LP L Sbjct: 78 GREYVLKEGEALFINSGLIHVTTSISEDGQYEGFMFPEKLLGFFPGSRMEQNYVLPYLKS 137 Query: 112 CFV----ASQVYRTNNAFLTYVETVISSLNLRE--TGLEEFVEMVTFYVINRLRHYREEQ 165 + + + L+ + + N +E T E V + + ++ + Sbjct: 138 NVLSVCVLYRESAEDEKILSDIRNLRELFNNKENVTAFEYEVAVRMTAIWLQIVRNVSDT 197 Query: 166 VID-----DVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQ 220 + Q + + + L+ + ++ S E R + +TPM Sbjct: 198 MQKMPACYLQRQERMKKMMQYIVEHYHEAITLKEIAESASISIEECRRCFKDIIKETPMH 257 Query: 221 IINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 ++ R+ + L T+ +TDIAF G++ S FI+ FKK TPK YR + Sbjct: 258 YLSSYRVMVGMELLRTTDLDITDIAFRVGFNDSSYFIQAFKKKNGMTPKQYRNHI 312 >UniRef50_UPI0001C3766F two-component response regulator n=2 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C3766F Length = 286 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 104/285 (36%), Gaps = 17/285 (5%) Query: 7 NAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLL 66 ++ E + + F + N H H+ E + L + G L Sbjct: 1 MIKNLSGVYETVEYENQRFVMLYDNDEIEEYPTHWHNAVEVIIPLHNGFTVVSGGVEYHL 60 Query: 67 ERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQ-----HYLPLLPYCFVASQVYRT 121 + + IP G H + G R + + LP+ + Sbjct: 61 SEKEIIVIPPGELHSMPAQDG--RRIIFQCDNSVISEVPSLESILPVFSSAVHITPSLNK 118 Query: 122 NNAFLTY--VETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKST-- 177 L + + + + + + M ++ +R ++ ++ +++ Sbjct: 119 ELYVLARKNILDIYTEYYSKAPMADVRIYMYLITILTAIREFQLNSADENSASAAENSDE 178 Query: 178 ------VEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAK 231 V K ++ E LE + +++ S+ + +R ++Y + +Q IN RI A+ Sbjct: 179 SRKFGLVTKYINQNYMYELPLEKLASIAGYSKYHFSRIFKKYNNMSYIQYINSKRIKAAE 238 Query: 232 KQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 + + ++ +T++A + G+SS + F + F+K TP +RK Sbjct: 239 RLMADSSLPITEVAMQCGFSSLTTFNRAFRKAKGCTPTEFRKLFK 283 >UniRef50_C0ECN2 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0ECN2_9CLOT Length = 334 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 94/261 (36%), Gaps = 20/261 (7%) Query: 38 GLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGIS 97 +H+HDY+E V G + V +++GD + + H + E + N+ IS Sbjct: 73 YMHRHDYFEMIYVYRGGFVNVFPDHTVRMKQGDIMLLNPNILHAPYVERDDDIVFNIFIS 132 Query: 98 KRFFEQHYLPLLPYCFVASQVY-----------------RTNNAFLTYVETVISSLNLRE 140 + +PL + + + + E +I + Sbjct: 133 NPMIREKIIPLQKDNSLLISFFMEYLYFDSQDKKYLNFTDNSPDSILLTEKMIEEYIEQR 192 Query: 141 TGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKE---QFSESALENMVA 197 + + + ++L + DV T+ L+++ Sbjct: 193 PFYQNMTDAYLVLLFSQLSRDYYKNHSIDVLPKNHHTLSYDIINYIGQNCRSITLDSLAK 252 Query: 198 LSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFI 257 + YL+R ++ GKT QI+++ ++ A + T+ + DI G+ S FI Sbjct: 253 HFQYTPNYLSRLIRQSTGKTFSQIVSQQKLQRAAGFITSTDMPIVDIGQIVGFYDVSHFI 312 Query: 258 KTFKKLTSFTPKSYRKKLTEF 278 ++FKK TP YRK + Sbjct: 313 RSFKKEYHLTPAEYRKTFSSL 333 >UniRef50_C0ABA0 L-rhamnose operon transcriptional activator n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0ABA0_9BACT Length = 297 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 55/294 (18%), Positives = 107/294 (36%), Gaps = 32/294 (10%) Query: 14 AREQQLFNGKNFHVFIYNKTESISG-----------LHQHDYYEFTLVLTGRYFQEINGK 62 A+ F F V + G H HD+ E +V GR + G+ Sbjct: 5 AKGVDYFGADGFPVTVRRVATQADGGESHPHDVTEIEHWHDFCELAMVTGGRGVHVLEGE 64 Query: 63 RVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPL-----LPYCFVASQ 117 + GD + H F E ++NV L F+ Sbjct: 65 SFHVSTGDVFVLQGRQVHC-FRERQGLALINVMYDPERLPLPLGLLRRLPGYSALFMLEP 123 Query: 118 VYRTNNAFLT--------------YVETVISSLNLRETGLEEFVEMVTFYVINRLRHYRE 163 +R+ + F + VE + + + G E + + ++ L + Sbjct: 124 TFRSTHRFSSRLRLARRELGSAEAIVERIENESKAAQEGHEAVLLSLLVELMVLLSRHYA 183 Query: 164 EQVIDDVPQWLKS-TVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQII 222 + + L+ + M ++ LE + + S+ L R ++ G++P+ + Sbjct: 184 QSDTRESHALLQVGQLVSMLEQRFGEPWTLEQLAEQARVSRSNLLRMFRQATGQSPIDFL 243 Query: 223 NEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 +RI A++ L ++ +T+IA E G+S + F + F+K TP YR+++ Sbjct: 244 IGLRIEAARRLLRRSDLGMTEIALECGFSDGNFFPRQFRKTCGVTPSIYRRQMR 297 >UniRef50_C6D710 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D710_PAESJ Length = 289 Score = 196 bits (500), Expect = 5e-49, Method: Composition-based stats. Identities = 50/263 (19%), Positives = 97/263 (36%), Gaps = 14/263 (5%) Query: 25 FHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFY 84 S+ H H YEF + +G I ++ GD + + H++ Sbjct: 21 IEFDRRIGYHSMDTTHYHRSYEFFYLYSGERKFFIRDSVYQIQSGDLILVNTNDVHRTSE 80 Query: 85 EFGATR-ILNVGISKRFFEQH--------YLPLLPYCFVASQVYRTNNAFLTYVETVISS 135 + + FF+ P + + E+++ Sbjct: 81 LSQPNHERIVLHYDLPFFDGLSREETELLLSPFASAHPIIKLNLQERMHLEALFESLLRE 140 Query: 136 LNLRETGLEEFVE-MVTFYVINRLRHYREEQVIDDVP----QWLKSTVEKMHDKEQFSES 190 L G + V M T ++ RH + + + + Q + + + ++ Sbjct: 141 LQECPPGYQLHVRNMATEILLFTARHALKRKSLPSIELTPVQQKVTDIIRHINQHFREPL 200 Query: 191 ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGY 250 L+ + S+ +L+R + G Q IN RI A+ L+ T++S+T I+ G+ Sbjct: 201 PLDELAKQFFISKGHLSRVFKEVTGFGFSQYINVTRIKEAELLLKETDWSITQISERCGF 260 Query: 251 SSPSLFIKTFKKLTSFTPKSYRK 273 + S F K FK+L+ +P+ YRK Sbjct: 261 ENFSHFGKVFKELSGLSPRDYRK 283 >UniRef50_UPI000178921D transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178921D Length = 318 Score = 196 bits (500), Expect = 5e-49, Method: Composition-based stats. Identities = 40/247 (16%), Positives = 85/247 (34%), Gaps = 12/247 (4%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISK 98 LH H E + G F ING ++ +GD +FI H+++ E + + Sbjct: 56 LHWHHALELNYIQGGTGFILINGMKLPFRQGDIIFINSNDLHRAY-ETENLVMDVIMFEP 114 Query: 99 RF------FEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTF 152 F+ + + ++ + ++ R T + Sbjct: 115 SLLSIDLKFDPDLMAPFRSLGNVDRQSPVHDELARLLRRMMEEYKARGTSYMSLIRSDLI 174 Query: 153 YVINRLRHYREEQVIDDVPQ-----WLKSTVEKMHDKEQFSESALENMVALSAKSQEYLT 207 ++ + + P V + + L+ + L+ S + Sbjct: 175 RFLSLANRHLSSPAQEHRPIKGRGMHALKEVLRTMELHLDYGWTLQELSDLTHLSPSRFS 234 Query: 208 RATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFT 267 Q+ G +P + ++R+ A LE T+ + +IA G+ + S F + FK+ + Sbjct: 235 ALFQQAVGTSPHHYLIQLRLTHAVHLLETTDQKIIEIAETCGFRNLSNFNRLFKQHVGAS 294 Query: 268 PKSYRKK 274 P R++ Sbjct: 295 PSEIRER 301 >UniRef50_C0EDW5 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDW5_9CLOT Length = 326 Score = 196 bits (500), Expect = 6e-49, Method: Composition-based stats. Identities = 61/265 (23%), Positives = 114/265 (43%), Gaps = 19/265 (7%) Query: 29 IYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGA 88 N+ + LH H Y+E V G+ + + L GD + + H+ + E Sbjct: 58 YENEQKKYLRLHTHTYFEMIYVYHGKAYNNFADSSMTLHTGDILILNPNIPHRLYIESPE 117 Query: 89 TRILNVGISKRFFEQHYLPLLP-----YCFVASQVYRTNNA-------------FLTYVE 130 + N+ ISK FE+ +L L+ F S +Y N A ++ Sbjct: 118 DIVFNIMISKDLFEKSFLLLISENDLFSNFFISYLYHMNQASDSILFRHNPESGITAVLD 177 Query: 131 TVISSLNLRETGLEEFVEMVTFYVINRLRH-YREEQVIDDVPQWLKSTVEKMHDKEQFSE 189 +I + G E+ +E RL Y ++ ++++ + K + +E F+E Sbjct: 178 MMIEEFFNKPMGYEKALESFLALTFTRLTRSYSHQENLEELKKQQKIMPIIAYIRENFAE 237 Query: 190 SALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAG 249 + L + S++YL+R ++ GK+ +I ++ +A++ L + +++IA G Sbjct: 238 ATLVSTAQQFNYSEKYLSRLIKQRTGKSFNEISIGYKLEYARELLLNSVLPISEIAQRVG 297 Query: 250 YSSPSLFIKTFKKLTSFTPKSYRKK 274 Y++ S F K FKK TP +RK Sbjct: 298 YANVSYFFKAFKKRYMQTPYQFRKS 322 >UniRef50_Q187Y6 AraC-family transcriptional regulator n=7 Tax=Clostridium RepID=Q187Y6_CLOD6 Length = 298 Score = 196 bits (500), Expect = 6e-49, Method: Composition-based stats. Identities = 45/270 (16%), Positives = 106/270 (39%), Gaps = 16/270 (5%) Query: 24 NFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSF 83 + + K + H H++ + + G + E + G+ V H Sbjct: 18 DIFLKDDIKKGANFKRHWHEHLQIYYFIDGIAYLECGLDNFKVVPGNIVIANSNELHYLE 77 Query: 84 YEFGATRILNVGISKRFF---------EQHYLPLLPYCFVASQVYRTNNAFLTYVETVIS 134 + ++ I F ++ PL V + + + ++ L + T++ Sbjct: 78 SLSDNLKFYSIRIEPTFLFSNQVDLLQTKYLAPLALNHIVFNNLIQNDSLILKCITTILD 137 Query: 135 SLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKST-------VEKMHDKEQF 187 + +E G E ++ + +I L +++ + + + + +++ Sbjct: 138 EYHNKEVGYELSIKANIYQLIVLLLRSHIDKIYSEDEFIKRKYSLEKFECIFDLIEEKYM 197 Query: 188 SESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFE 247 + L+ + + S + R ++ GKT + IN IR++ A L+ T+ ++T+IA Sbjct: 198 DKITLKELASRVNLSAHHFCRTFKQITGKTTIDFINGIRLDKAIYYLKETDLNMTEIAMR 257 Query: 248 AGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 G+ S + F + FK+ + +P YR + E Sbjct: 258 CGFDSINYFSRLFKRNYNISPTKYRNEHRE 287 >UniRef50_C6W740 Transcriptional regulator, AraC family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W740_DYAFD Length = 288 Score = 196 bits (500), Expect = 6e-49, Method: Composition-based stats. Identities = 56/274 (20%), Positives = 95/274 (34%), Gaps = 15/274 (5%) Query: 18 QLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLG 77 Q +F +F Y E + H H YE T++L + + E GD V + Sbjct: 9 QPLPESSFRIFGYEVKEFDAPWHYHPEYELTVILQSEGIRYVGNSMESFEAGDLVLLGPN 68 Query: 78 SHHQSFYEFG---ATRILNVGISKRFFEQHYLPLLPYCFVA------SQVYRTNNAFLTY 128 H + V F +L + + + +Q R N Sbjct: 69 LPHCWKNTPDSVGPASSIVVQWPAEFMGSGWLNVEEFKSIRRLLQLATQGVRFNQEVSAR 128 Query: 129 VETVISSLNLRETGLEEFVEMVTFYVI------NRLRHYREEQVIDDVPQWLKSTVEKMH 182 V +++++ + + ++ + L ++ +TV Sbjct: 129 VLPMLAAMLDMQPFPRLMKFLEILELLATVKSIHLLCEQGFTHPLNYEDNQRINTVYNYI 188 Query: 183 DKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 + L + L S+E +R R K +NE RIN A K L T+ V Sbjct: 189 REHYAERITLATLAGLVHMSEESFSRFFSRTMQKPLFTFLNEYRINMASKMLIETDMQVA 248 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 +I+F GY SP F + F+K TP +YR + Sbjct: 249 EISFACGYESPPFFFRQFRKFGGITPAAYRNQFR 282 >UniRef50_C6D3L6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3L6_PAESJ Length = 305 Score = 196 bits (499), Expect = 7e-49, Method: Composition-based stats. Identities = 56/278 (20%), Positives = 101/278 (36%), Gaps = 26/278 (9%) Query: 25 FHVFIYN-KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH-QS 82 FH+ Y K ++ LH+H++ E + G E G + GD I G H + Sbjct: 18 FHIEPYELKQGTMIPLHRHEFVELVFIKQGSGLHEYEGNTFPITAGDVFIIEPGMDHAYT 77 Query: 83 FYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVY-------------------RTNN 123 + ++NV E+ L Y R Sbjct: 78 VEQSEGMEVVNVLFVPALLERELAVLSGVTSFIDFYYMEPFLRSDVSFQAKLTLSPRQMM 137 Query: 124 AFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQ-----WLKSTV 178 +E ++ +E+G + ++ + L +P + + + Sbjct: 138 DIRGILEQLMKEYGNKESGYQFLIKSKLIELFIILSRIYANNRNHSLPSIQNDGEMIARI 197 Query: 179 EKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTN 238 + + Q +LE + ++ SQ T ++ G + ++ N+ RI AK+ L ++ Sbjct: 198 CEFIKRHQAHPLSLEQISQMAGMSQSKFTLLFRQMTGMSFVEFRNDQRIQLAKQLLAASS 257 Query: 239 YSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 + IA + GY S F FKKLT TP YRK++ Sbjct: 258 DKIARIALDTGYEDLSHFNHVFKKLTGETPSLYRKRMK 295 >UniRef50_C3X327 AraC family transcriptional regulator n=1 Tax=Oxalobacter formigenes HOxBLS RepID=C3X327_OXAFO Length = 289 Score = 196 bits (499), Expect = 8e-49, Method: Composition-based stats. Identities = 52/261 (19%), Positives = 90/261 (34%), Gaps = 20/261 (7%) Query: 37 SGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH-------QSFYEFGAT 89 LH H+ YE +V G + I GD I H + Sbjct: 26 YPLHCHEEYELVIVTAGTGREYIGHAVENYRAGDMTLIGPDIPHLHLCDSLTGKNGSEES 85 Query: 90 RILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFL----TYVETVISSLNLRETGLEE 145 + S F + + Y +A+ + ++ + + + G Sbjct: 86 ACEILYFSPSLFPDNMDGIAEYRAIAAVLEKSRRGVRYSDPALTRQIRKQVQRLDKGQGI 145 Query: 146 FVEMVTFYVINRLRHYREEQVIDDVP---------QWLKSTVEKMHDKEQFSESALENMV 196 +++ L +E +I P Q TV + + L+ + Sbjct: 146 GRIRWLLALLDTLARSQETSLIASGPVRNGTALRRQETVDTVCRYLREHFRENLCLQAIA 205 Query: 197 ALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLF 256 + + L R ++ GKT + IRI A + L T S++ IA+E G+++ S F Sbjct: 206 REACMNPSALCRHFRQRTGKTLFAFLAGIRIENACRLLLETRLSISAIAWETGFANLSHF 265 Query: 257 IKTFKKLTSFTPKSYRKKLTE 277 + FK LT TP YRK + Sbjct: 266 NRQFKSLTGQTPGEYRKNIRS 286 >UniRef50_B0M9M5 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0M9M5_9FIRM Length = 315 Score = 196 bits (498), Expect = 9e-49, Method: Composition-based stats. Identities = 48/291 (16%), Positives = 92/291 (31%), Gaps = 23/291 (7%) Query: 5 VINAPEIATAREQQLFNGKNFHVF-----IYNKTESISGLHQHDYYEFTLVLTGRYFQEI 59 + RE + F ++ + H H EF+++ G E Sbjct: 8 LRQIETDQNFRELNQTLDQRFPIWASSDSFFRYYNRYFRCHWHPEIEFSVITEGECIYEA 67 Query: 60 NGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNV--------------GISKRFFEQHY 105 + L++GD +FI H + + V I ++F E Sbjct: 68 GDRVYELKKGDGIFINQNVLHMAEMKGKLECRFGVVRAEAFFLGGSTESLIYRKFMEPVI 127 Query: 106 LPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQ 165 C + + +I R G E + + E+ Sbjct: 128 NNPEISCVPFYGDIPWQKRLMRQLAELIRIYEERPEGFELMMTSGFSLLWLEFVKALGEE 187 Query: 166 VID----DVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQI 221 + + + + L+++ + Q R + ++P++ Sbjct: 188 KGNAVSINKDAERIRKGISYIQRNYTKKITLKDIAEICQSCQSECCRMFRNVVKESPIEY 247 Query: 222 INEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 +N RI + +E YS+T+IA + G+S S F + FKK TP Y+ Sbjct: 248 VNTYRIRRSLILIEEGTYSMTEIAQKTGFSGSSYFTEVFKKKMGCTPSKYK 298 >UniRef50_C6JC61 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC61_9FIRM Length = 298 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 41/298 (13%), Positives = 106/298 (35%), Gaps = 23/298 (7%) Query: 5 VINAPEIATAREQQLFNGKNFHVFIYNKT-----ESISGLHQHDYYEFTLVLTGRYFQEI 59 + + +E + F + + + H H E TLVL G+ ++ Sbjct: 1 MAEIITDGSQKELKKHGSDEFPLLVSYEKLSGYKSGSFLWHWHPEIEITLVLDGQILYKV 60 Query: 60 NGKRVLLERGDFVFIPLGSHHQSFYEF-GATRILNVGISKRFFEQHYLPLLPYCFVASQV 118 N ++ GD + H F E + +++ + Y +L +V + Sbjct: 61 NQCTYHMKAGDILLGNANVLHAGFMEDMKDGKYVSITFLPKIIYGSYGSILRRKYVEPFL 120 Query: 119 Y-------------RTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQ 165 + + F YV +I+ ++ E + + + E Sbjct: 121 HNFSLPAVYIDYSQPWHEVFSEYVREIITLYEEKKEFYELDITGTLQKLWRCMLQNLPEN 180 Query: 166 ----VIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQI 221 + + + + ++ ++++ + +R +RY + Sbjct: 181 LPYTEHSKLERNRMREIMDYLEYNYMNKIQMKDIAEEIHLCESECSRLFKRYMNVSLFTF 240 Query: 222 INEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFN 279 + E R+ + + L ++ S+ ++A ++G++ + + K F ++ +P+ YRK+ T+ Sbjct: 241 LQEYRVERSLEFLLSSDDSIMEVAQKSGFTDSNYYAKIFSRVKGCSPQKYRKQNTKKE 298 >UniRef50_B2TM72 AraC-family transcriptional regulator n=3 Tax=Clostridium botulinum RepID=B2TM72_CLOBB Length = 291 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 59/285 (20%), Positives = 116/285 (40%), Gaps = 24/285 (8%) Query: 15 REQQLFNGKNFHVFIYN----KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 +E++ + IYN E H H+ E LVL+G + +IN + GD Sbjct: 7 KEKREHGNFLLPLGIYNVSLGNIEKSIIAHWHNEIELILVLSGEFNLKINTDSYTCKDGD 66 Query: 71 FVFIPLGSHHQSFYEFGATRILN-VGISKRFFEQHYL---------PLLPYCFVASQVYR 120 + I GS H + + N + + + L P++ F + Sbjct: 67 IILINSGSLHYFSTKENESSTWNSIVFNMDQLNSNILDNCSVNFITPIINNEFKLPVIIH 126 Query: 121 ----TNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYR------EEQVIDDV 170 NN + +I + N + G E ++ + F + L + +++ Sbjct: 127 KDSLINNELKCIILNIIDTYNSKYYGFELEIKSLIFKYFSLLFKFNLVKKKTNNTCLNEE 186 Query: 171 PQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFA 230 V + + E + + A+ +Q + R +++ GKT +Q I R+ A Sbjct: 187 KIEKIKIVLEYIQENYNKEIDINRLSAICHYNQSHFMRFFKKHTGKTCIQFIKNYRLEKA 246 Query: 231 KKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 + T+ S+T+I+ E G+++ S FI++FK+ + TPK ++ +L Sbjct: 247 ASLISNTDLSITEISLEVGFTNISYFIRSFKEKYNTTPKGFKTRL 291 >UniRef50_UPI0001B9ED63 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9ED63 Length = 287 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 49/278 (17%), Positives = 94/278 (33%), Gaps = 15/278 (5%) Query: 10 EIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 E T + +H I+ H H YE +++G I K + G Sbjct: 6 ETHTVSYGEEEGEFYYH-RIHRTKPFERNNHYHGTYEIYYLVSGERHYFIKEKLYSIRAG 64 Query: 70 DFVFIPLGSHHQSFYEFGATR-ILNVGISKRFFEQHYLPL--------LPYCFVASQVYR 120 D + I H++ + + S F + + L + Sbjct: 65 DLILINKFDVHKTSGHGDPEHERIVINFSDSFLGKGHPLLASGLLGMFNQDRPLLRLTVP 124 Query: 121 TNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVID-----DVPQWLK 175 + + + + R E ++++ ++ + + + Sbjct: 125 EQAIIMQILNKMADEIRERSASYEHMLQVLLTELLIKTYRLTHSASLPANVSMNPLHQKI 184 Query: 176 STVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLE 235 + V K + L+ + S YL+R + G T + +N RI A++ L Sbjct: 185 TDVVKFIHVHYADKITLQGLSETFYISPFYLSRIFKEITGFTIINYLNLTRIREAQRLLT 244 Query: 236 MTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 T+ + DIA G+ S + F +TFKK+ + T YRK Sbjct: 245 DTDLKIVDIAESIGFESLTHFDRTFKKIMNMTASQYRK 282 >UniRef50_B6FJC5 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FJC5_9CLOT Length = 309 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 60/306 (19%), Positives = 106/306 (34%), Gaps = 33/306 (10%) Query: 1 MMQPVINAPEIAT-AREQQLFNGKNFHVFIYNKTES--------ISGLHQHDYYEFTLVL 51 M N +I E + K F + +Y T+ LH H+ +FT+V Sbjct: 1 MKMQRYNPKQIEKPLHEINYYTDKGFPIEMYTVTQGNIEPSGRGYMDLHWHEELQFTVVT 60 Query: 52 TGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPY 111 +G+ ++GK L+ G+ +FI H + R L+ + + Sbjct: 61 SGKLKLRVDGKLYTLDEGNGIFINRNLLHITTEISDGGRYLSFNFPDKVVSFFSGSTMEE 120 Query: 112 CFVASQV-------------YRTNNAFLTYVETVISSLNLRETGLEE-----------FV 147 FV V L + + R + V Sbjct: 121 NFVLPYVGNYGIAVVEFKRTTSWQKEILDTLLKMELLFKRRREKRQAVGREEYQIAIKIV 180 Query: 148 EMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLT 207 E+ + N + ++ Q + + L ++ S Sbjct: 181 EIWYMMICNIEKSGKKISNSYIRKQERIQAMLSYIHNQYMHPMCLADIAQAGNVSVGECC 240 Query: 208 RATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFT 267 R + K+P + + E RI +K+ L T SVT+++ G++S S FI+ FKK+T T Sbjct: 241 RGFKEVVCKSPNEYLAEYRILRSKELLRGTELSVTEVSGAVGFNSVSHFIQCFKKMTGVT 300 Query: 268 PKSYRK 273 PK+Y+ Sbjct: 301 PKAYKN 306 >UniRef50_C6D8E9 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8E9_PAESJ Length = 294 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 56/295 (18%), Positives = 114/295 (38%), Gaps = 21/295 (7%) Query: 6 INAPEIATAREQQLFNGKNFHVFIYNKTESISG-----LHQHDYYEFTLVLTGRYFQEIN 60 + + E+ +N KNF ++I T H H EF LVL G +N Sbjct: 1 MQLDVFSDLSERLNYNLKNFQLYIKKGTLMPFDKYAAACHWHPDLEFILVLDGYMNFFVN 60 Query: 61 GKRVLLERGDFVFIPLGSHHQSFYEFG-ATRILNVGISK-----------RFFEQHYLPL 108 G+ VLLE+G +F+ H + + V I ++E+ + P Sbjct: 61 GETVLLEKGTGIFVSSKRLHYGYSPDKIDCSYIVVCIHPSLLGNEQWIGKEYWEEKFGPN 120 Query: 109 LPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFY---VINRLRHYREEQ 165 V ++ + L + + ++ + + + + +R+ +E Sbjct: 121 TEDFIVLTEHESWHKDALVSLNQLYEEMHATKRNPIRLLSIAMSLTANIGDRIGEKKEPT 180 Query: 166 VIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEI 225 ID ++ +H + L+++ A + S+ +Y ++P + + Sbjct: 181 AIDPSWFYVWKMTAFIH-GHFEHKITLDDIAAAGSVSRSQCCILFGKYVEQSPNTYLMKY 239 Query: 226 RINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 RI + + L T+ S+++IA G+ S S + F+K P YR++ + +Q Sbjct: 240 RIKKSCELLSETDRSISEIAISCGFQSSSYYTFVFRKELGIVPNEYRRQYRDAHQ 294 >UniRef50_B6VVW1 Putative uncharacterized protein n=2 Tax=Bacteroidales RepID=B6VVW1_9BACE Length = 288 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 95/282 (33%), Gaps = 16/282 (5%) Query: 12 ATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDF 71 E + + F + + + LH+HD +E V+ G+ + E GD Sbjct: 8 YELPEAENHSF--FFIDQRTEPSLEAKLHRHDAWELYYVVHGQGNRMAGDTLQHFEAGDV 65 Query: 72 VFIPLGSHHQSFY------EFGATRILNVGISKRFFEQH------YLPLLPYCFVASQVY 119 IP H+ Y E G R L V E+ L + Sbjct: 66 ALIPPSMLHRWEYAADSADEDGCVRYLMVAFKHSLVERSMEVFPELRNRLADVMFPTDAL 125 Query: 120 RTNNAFLTYVETVISSLN-LRETGLEEFVEMVTFYVINRLRHYREEQVID-DVPQWLKST 177 + + + +S +N + E G + + + H + + + Sbjct: 126 KFGPESVRVIRKTLSEMNGMDELGRLSAMFRLLPVIFTSSDHIFAGKPMRIEKNVRRMQQ 185 Query: 178 VEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMT 237 + K AL+++ A ++ +R G T Q + + R+N A L+ + Sbjct: 186 ICAYVMKHYVHSIALDDIAAEVGMNRSAFCSYFKRCKGMTFSQFVTQYRLNTACDLLKHS 245 Query: 238 NYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFN 279 V++I + G++ F++ F P YRK+ N Sbjct: 246 QKGVSEICYLVGFNDLPHFVRVFTSTMGMPPSKYRKQFKAGN 287 >UniRef50_C6JJY6 Transcription regulator n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JJY6_FUSVA Length = 288 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 53/282 (18%), Positives = 103/282 (36%), Gaps = 17/282 (6%) Query: 15 REQQLFNGKNFHVFIYNKTESISGLH----QHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 +E + F Y H H YE +L+G + +I+ ++ GD Sbjct: 7 KEDMVHGSTKFPFAYYYVNSYHPRYHMITHWHKEYEIIRILSGTFNIKIDAVSYTVKTGD 66 Query: 71 FVFIPLGSHHQSFYEFGATRILNVGIS-----KRFFEQHYLPLLPYCFVASQVYRTN-NA 124 +F+ G+ H L IS L+ Y ++ A Sbjct: 67 ILFLNSGAIHSGIPVDCTYECLVFDISSLLQQNSLVNTELNALIHYKKKIQLLFDKKLGA 126 Query: 125 FLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYR------EEQVIDDVPQWLKSTV 178 + + + ++ G + + +Y + + E I+ V Sbjct: 127 VYDILNQMFEIMKDKKNGYQLRIYGNLYYFLGLVEEKNLYIKEKEFSAINKKSLSRIKKV 186 Query: 179 EKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTN 238 + + +LE+M +++Y + + KTPM+ +N RI A ++++ + Sbjct: 187 LFFIETKYMENISLEDMAKTIKMNEKYFCKFFKEITKKTPMEYLNHYRIECACEKIKFFD 246 Query: 239 YSVTDIAFEAGYSSPSLFIKTFKKLT-SFTPKSYRKKLTEFN 279 S+TD+A++ G++ S F K FKK TP+ Y K + Sbjct: 247 SSITDVAYDCGFNDTSYFTKVFKKYNSGMTPREYSKLYLKKE 288 >UniRef50_A6LH31 Transcriptional regulator n=5 Tax=Bacteroidales RepID=A6LH31_PARD8 Length = 293 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 56/289 (19%), Positives = 104/289 (35%), Gaps = 22/289 (7%) Query: 10 EIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 +E + H ++ + I H H E + +G + + G Sbjct: 1 MKPLFQELPFPIDSHIHFYVEDLPHFIVPWHYHPAIEIMYITSGTGTRFVGDHVEGYFEG 60 Query: 70 DFVFIPLGSHHQS--------FYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRT 121 D I H+ + + ++ FE + + L + + R+ Sbjct: 61 DVCMIGPQLPHEWRNDPVYFDKSSGLRATCICLFFKRQIFEPNLIRLPEMNNIRELIERS 120 Query: 122 NNAF------LTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYRE-------EQVID 168 + +IS + ETG ++++ + E + ++ Sbjct: 121 RRGIKFVGKSRKKIAELISQ-SANETGASRVIKLIALLELMATSEEYEILASTGFTETVN 179 Query: 169 DVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRIN 228 + V K K S LE + AL + R ++ KT ++ +N++RI Sbjct: 180 SDDFERFNKVYKYLVKNFTSPVKLEEVAALVGLTPTAFCRYFKKRTKKTFVEYLNDMRIG 239 Query: 229 FAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 AKK L N ++ I+ EAG+++ S FI FKK T+ P Y+KK E Sbjct: 240 HAKKLLIEGNLKISTISSEAGFNNLSNFIGQFKKTTNMLPSEYQKKYKE 288 >UniRef50_C9KMM0 Putative AraC-type DNA-binding domain-containing protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMM0_9FIRM Length = 248 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 61/244 (25%), Positives = 96/244 (39%), Gaps = 7/244 (2%) Query: 39 LHQHDY-YEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGIS 97 +HQH+ E LV GR I+ L GD +F G H G +G+S Sbjct: 1 MHQHEDRAEIILVTGGRGSFNIDTGHYLASPGDVLFFDSGILHDETTIDGDLATSCLGVS 60 Query: 98 KRFFEQHYLPLLPYCFVASQVYR--TNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVI 155 + A Q+ +A T T + + ++ +T ++ Sbjct: 61 DFQLPGRRANEMVGRLYAPQLSLDAQFDAVRTLFHTAVQLALAGDA--PCVLDQLTCAIL 118 Query: 156 NRLRHYREEQVIDDVPQW--LKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRY 213 +L PQ L TV+ D L+++ A + YL A + + Sbjct: 119 CKLDEELARHGQPPRPQQESLGLTVKAYIDAHYRESITLQSIAAELNFNPYYLAHAFREH 178 Query: 214 YGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 G +PMQ I RI A+ L T+ S+T+IAF GY++ + F FK+L TP YR+ Sbjct: 179 IGYSPMQYIIRRRIGEAQNLLIGTDRSITEIAFSCGYNNSNYFQSVFKRLVGMTPGQYRR 238 Query: 274 KLTE 277 + Sbjct: 239 DWVQ 242 >UniRef50_UPI0001788F57 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788F57 Length = 292 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 50/295 (16%), Positives = 103/295 (34%), Gaps = 23/295 (7%) Query: 2 MQPVINAPEIATAREQQLFNGKNFHVFIYNK---TESISGLHQHDYYEFTLVLTGRYFQE 58 M ++ ++++ KN+ +F+ + T LH H+ E + +G + Sbjct: 1 MPSIMR---EEAIPKEKVILAKNYPIFVADTIGVTSPYQKLHWHNVLEINYIKSGMGYYI 57 Query: 59 INGKRVLLERGDFVFIPLGSHHQSFYE----------FGATRILNVGISKRFFEQHYLPL 108 ING++ ++GD + I H ++ I N+ F Sbjct: 58 INGQKFEFQQGDVLLINSNDLHCAYETKDLVMTVISFDSTWFIHNLRFDPELFSPFREMG 117 Query: 109 LPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYR------ 162 Y + + + + + + + V + + + Sbjct: 118 KHYMNLIPRDHPAMGKLRSLLFELQEEHVGEQRSYATVVYSLLLQFLATVNRQCRIEGEG 177 Query: 163 -EEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQI 221 E I + V + ++ LE + +L S + +R G P+ Sbjct: 178 GSEPSISERQLEKMRQVIMVMEQNFAHPWTLEELASLVYLSPSRFSEIFKRAVGMPPLLY 237 Query: 222 INEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 + IR+ A LE + V D+A E G+ + + F + FKK TPK+ +K+ + Sbjct: 238 LIHIRLEQAVTMLEGGHMKVMDVALECGFRTLTNFNRLFKKHIGMTPKASQKQHS 292 >UniRef50_Q5WCU1 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WCU1_BACSK Length = 308 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 53/273 (19%), Positives = 106/273 (38%), Gaps = 21/273 (7%) Query: 26 HVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYE 85 H+ I+ H HD E +GR ++G+ L+E+GD V I H + E Sbjct: 25 HMQTSEPNRRIASPHFHDAIELLYSFSGRARVFVSGQPFLMEKGDLVIINSNEVHAIWGE 84 Query: 86 FGA-TRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNA-------------FLTYVET 131 G L + + + +V ++ + Sbjct: 85 SGEKVEYLVIKLDPEVLYSTSRSIFESKYVFPFTMSKSSPQTLLKSGEMASTVIPATIAK 144 Query: 132 VISSLNLRETGLEEFVEMVTFYVINRLRHYREE-------QVIDDVPQWLKSTVEKMHDK 184 + + ++ G + + + + + + + + I+D L V ++ + Sbjct: 145 INDEFSHKDYGYDFAIRIHICTIFLAVLRHWRQSGISVGTESINDSDFQLMRQVFQLLES 204 Query: 185 EQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDI 244 + + A S Y +R + G++ +++N IRI A+K L T+ S+T++ Sbjct: 205 HYATALTAKQAAATCNLSYSYFSRKIKSITGRSFTELLNYIRITEAEKLLTTTDLSITEV 264 Query: 245 AFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 A GYSS S FI+ FK+ +P ++K+L + Sbjct: 265 AVSVGYSSTSYFIQHFKQAKHLSPLRFKKRLQQ 297 >UniRef50_C6D083 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D083_PAESJ Length = 291 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 58/271 (21%), Positives = 103/271 (38%), Gaps = 18/271 (6%) Query: 20 FNGKNFHVFIYNKTE-SISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGS 78 F +++ E G H H++ E T V G I G+ V +E G FIP+G Sbjct: 15 FFEPGVPLYVNRAYESFDMGEHSHEFVEITYVSEGAGIHYIAGEAVPVEHGTLFFIPVGQ 74 Query: 79 HHQSFYE----FGATRILNVGISKRFFEQH-----YLPLLPYCFVASQVY-----RTNNA 124 H + + N + + + Y + CF + + Sbjct: 75 SHVFRPKTPKKDRPLIVYNCLLPASYLSELRDGFPYATEILDCFADEGLSWFSVKDSTGE 134 Query: 125 FLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVID--DVPQWL-KSTVEKM 181 + + + + + ++ L ++ + + D PQWL Sbjct: 135 YHAMFRELYQEFAAKPPAYMAVLASLVMRILTGLYRHKLQIIAPAGDRPQWLSVDEAIAF 194 Query: 182 HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSV 241 D+ SE L + A + S+ +R +R+ G + ++ + IR++ A + L + SV Sbjct: 195 IDRNYASELKLGELAAQAKLSERQFSRLFRRHTGMSLIEYVQSIRMDAACRLLTTRHSSV 254 Query: 242 TDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 DIA GY+ F + FKK T TP+ YR Sbjct: 255 EDIAGAVGYADMKFFYRLFKKKTGVTPRQYR 285 >UniRef50_C3R936 Transcriptional regulator n=2 Tax=Bacteroidales RepID=C3R936_9BACE Length = 286 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 54/284 (19%), Positives = 94/284 (33%), Gaps = 16/284 (5%) Query: 7 NAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLL 66 +A E + + F + + + LHQHD +E V+ G+ + Sbjct: 3 DAIIPYELPEVENHSF--FFIDQQVEVNLEAKLHQHDAWELYYVVHGQGNRMAGDTLQPF 60 Query: 67 ERGDFVFIPLGSHHQSFY------EFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYR 120 GD V IP H+ Y E G R L V S E+ S V Sbjct: 61 TAGDVVLIPPSMIHRWEYNADSTDEEGHVRYLMVAFSHSLLERCIEVFPELRNRLSGVQF 120 Query: 121 TNNAFL------TYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYRE--EQVIDDVPQ 172 +A + ++S +N + VI Y + + + Sbjct: 121 PTDALKFGLESSRIIRRILSEINEMDELERLSAMFRLLPVIFTSSDYTLAGKPMRIERDV 180 Query: 173 WLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKK 232 + K AL+++ ++ +R G T Q + + R+N A Sbjct: 181 RRMQQICAYVMKHYVHSIALDDIAEEVGMNRSAFCSYFKRCKGMTFSQFVTQYRLNTACH 240 Query: 233 QLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 L+ T V +I + G++ F++ F +P YRK+ Sbjct: 241 LLKNTQRGVAEICYMVGFNDLPHFVRVFTNTMGMSPTKYRKQYK 284 >UniRef50_UPI00017894C2 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017894C2 Length = 310 Score = 194 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 95/279 (34%), Gaps = 27/279 (9%) Query: 23 KNFHVFIYNKTESISGL-HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQ 81 + +Y T S H HDY++ V G + + + + +GD IP + H Sbjct: 29 EGLPCKMYKLTYQQSLWTHCHDYFQIWYVAKGAFLHTVQQQVYEIRKGDIFVIPPFTLHS 88 Query: 82 -SFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRT------------------- 121 S I F + + + Sbjct: 89 VSISPDEDIEIYGCEFMPSFVNERFQEQPTDHAFFDVAFLEYFLRKEMNAQSQITLDSVT 148 Query: 122 NNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRH------YREEQVIDDVPQWLK 175 + ++ ++ R + ++ +++ L RE + + + Sbjct: 149 DVTVRNVLKDMLIEYERRTPFFQISLKAKLLVLLSILARQVNGELLREGFEKSEKYREIM 208 Query: 176 STVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLE 235 + V + L ++ +LS S+ + + GKT + + ++RI A L+ Sbjct: 209 TRVVDHIHNHYQEDMNLNDLCSLSNLSRSTFCILFKEWTGKTFNRYLTDLRILQAMMMLK 268 Query: 236 MTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 SVTD+ + G++ S F + FKK T +P +RK+ Sbjct: 269 QPELSVTDVCYSTGFNELSYFCRIFKKYTGISPTDFRKQ 307 >UniRef50_C0EIY9 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIY9_9CLOT Length = 327 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 55/281 (19%), Positives = 110/281 (39%), Gaps = 19/281 (6%) Query: 16 EQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIP 75 E F V ++ K H H+++E V G ++G++++L+ GD +F+ Sbjct: 43 EMFFRGDNRFSVILHPKLAIAQRYHTHEFFEIIYVYAGSCTTTVDGEQMVLKAGDLLFLN 102 Query: 76 LGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVY---------------- 119 + + H + + N+ I F EQ LL V Y Sbjct: 103 IQTGHVISVDSWDDIVFNILIKPDFLEQSLFHLLSENDVFLNFYLESLYNRTMSEKYLLF 162 Query: 120 -RTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTV 178 + + + ++ ++ + +E +++ L Q K+ V Sbjct: 163 QENTDEIASTADRIVIEYLRQDPFAMKVIEAQFVTLVSLLARENRRQAPTGETIPGKAFV 222 Query: 179 EKMHD--KEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEM 236 ++ ++ + L++ + YL+ + Y GK ++II + +I A++ L+ Sbjct: 223 PEILQWLSNHYAGATLKSTAEHFHYTTSYLSFLIKEYTGKNFLRIIQDFKIREAERYLKE 282 Query: 237 TNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 T+ SV I+ + GY + F + FK T TP YR+ E Sbjct: 283 TSLSVERISDQLGYKDAAYFCRVFKNTTGATPSEYRRSQQE 323 >UniRef50_C0EIX6 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIX6_9CLOT Length = 330 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 50/274 (18%), Positives = 101/274 (36%), Gaps = 21/274 (7%) Query: 23 KNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQS 82 V ++ LH HD++E V G + L GD + + + H Sbjct: 54 DEILVSLHRGNHRDRYLHNHDFFELLYVYKGSCVNMTREGEMPLNEGDLLLLNPNALHAP 113 Query: 83 FYEFGATRILNVGISKRFFEQHYLPLLPYC-----FVASQVYRTN-------------NA 124 F ++N+ + FE L L+ F + +Y N + Sbjct: 114 FAPGEENIVVNIIVRPSVFENVMLSLIADNKLFSNFFVNYLYHINMTTSYLYFPKDEEHP 173 Query: 125 FLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDK 184 ++ +I+ + ++ + + L + ++ + KS + Sbjct: 174 IKFIMDMLIAEYLSHDICYTNVMQAILVQLFAALARSYRKMNKVEIEDFEKSQLVVDIIS 233 Query: 185 EQFSES---ALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSV 241 L+ + S Y+++ Y GK +I++ +R++ AKK LE + ++ Sbjct: 234 HINQNIATVTLKELSERFQYSSSYISKLINSYTGKNFSEIVHFLRLDRAKKYLENKDLTI 293 Query: 242 TDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 T+I G+S + F K FK + +P YRK++ Sbjct: 294 TEITQAVGFSDSNYFYKVFKNRFNLSPSEYRKQV 327 >UniRef50_C6J8U5 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8U5_9FIRM Length = 279 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 61/270 (22%), Positives = 108/270 (40%), Gaps = 12/270 (4%) Query: 8 APEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLE 67 +PE TA+ L N + + + S H H + E V G+ I + + Sbjct: 9 SPEHPTAQNITLLNTSSSRY----EGDWPSIPHSHAFTELFYVRDGQGDFLIEDQIFPIS 64 Query: 68 RGDFVFIPLGSHHQSFYEFGAT-RILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFL 126 + D V I +H + VG+ F + + L Sbjct: 65 KDDLVIINPHINHTEISKGSPPLSYFTVGVDGLCFSFNGHKEYRIFNCREK----KTDLL 120 Query: 127 TYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYRE---EQVIDDVPQWLKSTVEKMHD 183 Y ++ L+ + G E + +I +LR + E + P + +++ D Sbjct: 121 FYFNSLFQELDRQSEGYETICSHMLDILILQLRRITDSPFELITAQHPSKECAHIKRYLD 180 Query: 184 KEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTD 243 L+++ LS ++ YL+ +YYG +P+ +N RI K+ LE T+Y ++D Sbjct: 181 SNYGENITLDHLSELSHLNKYYLSHEFTKYYGISPINYLNRKRIEVCKELLENTDYGISD 240 Query: 244 IAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 IA G+SS S ++F+K T +YRK Sbjct: 241 IAHLTGFSSQSYLSQSFRKSCGMTAGTYRK 270 >UniRef50_A9KLS8 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KLS8_CLOPH Length = 277 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 49/250 (19%), Positives = 92/250 (36%), Gaps = 15/250 (6%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATR-ILNVGISK 98 H H++YE +L+G +N + +G+ + I G+ H++ Y G + + + SK Sbjct: 24 HLHNFYEMYYLLSGTRRFFVNDTLYNVSKGELILIEEGALHRTTYISGGSHERICITFSK 83 Query: 99 RFFEQHYLPLLPYCF---VASQVYRTNNAFLTYVETVI----SSLNLRETGLEEFVEMVT 151 F + + + R + Y E +I + ++T Sbjct: 84 SFLQPLFQEFGEEAVLKCFSQPYVRIPQSRREYFEDLISKAHREMMYQDTYSLYLASSHV 143 Query: 152 FYVINRLRHYREEQVIDDV-------PQWLKSTVEKMHDKEQFSESALENMVALSAKSQE 204 + +I + DD+ + K S LE A S Sbjct: 144 YELILFILRLNSISKQDDITPYDASPDDQIMEKAAKYICSNYQSPVTLEETAAYCNMSTT 203 Query: 205 YLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLT 264 Y ++ + G + + IRI A + L T +T+IA +G++ + F FK++ Sbjct: 204 YFSKKFKAVTGFGFKEYLISIRIREASRLLLHTKLPITEIALLSGFNDSNYFGDVFKRMK 263 Query: 265 SFTPKSYRKK 274 +P YRK Sbjct: 264 GISPCKYRKN 273 >UniRef50_A0AET6 Complete genome n=16 Tax=Listeria RepID=A0AET6_LISW6 Length = 277 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 55/258 (21%), Positives = 108/258 (41%), Gaps = 12/258 (4%) Query: 29 IYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGA 88 Y I H HD+ E +++ G+ +I G+RV LE+GD + G H E G Sbjct: 19 CYTNEVRIGDNHHHDFLEISIIYDGKVIYDIEGERVELEKGDMLIFNPGVKHYDITEPGM 78 Query: 89 TRI-LNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFV 147 T L++G E + P+ + ++A L+ + +I + + G + + Sbjct: 79 TNAQLHIGFRNFTLEGYSRNTFPFKKAFLRKKEEDSAILSISKQIIEEKDAEKPGYDLIL 138 Query: 148 EMVTFYVINRLRHYREEQVIDDV----------PQWLKSTVEKMHDKEQFSESALENMVA 197 + +I + + +++ Q L + + +K + +L + Sbjct: 139 KAFVMQLIIHVLREATPEQLENNGVKLSTDEQQKQLLVNEIIHYMEKHHTEDVSLSTLSQ 198 Query: 198 LSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFI 257 S Y+++ + G++P+ + +IR++ A++ L+ N +V A GY+ F Sbjct: 199 TMYISPAYISKVFKEETGESPINYLIKIRLSRAEELLKNKNITVKQAANMVGYNDAYYFS 258 Query: 258 KTFKKLTSFTPKS-YRKK 274 K FKK F P +RK Sbjct: 259 KLFKKYYGFPPSENWRKS 276 >UniRef50_C4ZFS6 Two-component response regulator n=4 Tax=Clostridiales RepID=C4ZFS6_EUBR3 Length = 293 Score = 194 bits (493), Expect = 3e-48, Method: Composition-based stats. Identities = 58/289 (20%), Positives = 100/289 (34%), Gaps = 20/289 (6%) Query: 7 NAPEIATAREQQLFNGKNFHVFIYNKTESISGL----HQHDYYEFTLVLTGRYFQEINGK 62 N P +E F V Y + H HD E TL+ G +I+ Sbjct: 4 NNPPALGQKENAKHGEVFFPVQKYITRLAADYPVITTHWHDEAELTLITKGSCTYQIDLL 63 Query: 63 RVLLERGDFVFIPLGSHHQSFYEFGA-----TRILNVGI----SKRFFEQHYL-PLLPYC 112 + GD +FIP H T + ++ + YL PL+ + Sbjct: 64 EYEAKEGDIIFIPPLLLHSISIRDCDEFYSETYVFHINFLGGNNTDICSSRYLTPLINHE 123 Query: 113 FVASQVYRTNNA----FLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQV-- 166 F + + + + + +E E ++ I L Y E+ Sbjct: 124 FAMPYLIAPKHPAYSSLCKCFMRITNLYSRQEFAYELALKAFLLQAIFLLLQYSEKNADF 183 Query: 167 IDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIR 226 + V D + + L S+ + R +++ T +Q IN +R Sbjct: 184 GVNTSSDKLKNVLDYIDVHYAESIQVAELAGLCYFSEYHFMRFFKKHMNMTCVQYINNVR 243 Query: 227 INFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 + + +Q E N S+ D++ G+ + S F + FKK TP S+ K L Sbjct: 244 LEKSVEQFERGNTSILDVSLSVGFHNLSYFHRAFKKRYHMTPLSFIKSL 292 >UniRef50_C5ET70 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ET70_9FIRM Length = 273 Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 46/246 (18%), Positives = 100/246 (40%), Gaps = 2/246 (0%) Query: 33 TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG-ATRI 91 ++++ H H+Y+E + +G+ + + L G+F+ P H S+ + G + + Sbjct: 16 NDNMAKSHYHEYFELYYLESGKRYHIADDTLYCLNSGEFILFPPYVMHHSYGDSGVSFKR 75 Query: 92 LNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVT 151 L + +K + + N + ++ + EE + + Sbjct: 76 LVLYFTKEMIAVPGVTDVLDQHAWVYKSDEKNETHALLRALLKEQEFNDNYSEEALYFIL 135 Query: 152 FYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQ 211 ++ L E + + S + +H+ L + S YL R + Sbjct: 136 NQILILLLRNSTETAKPEKQSRITSIIHYLHE-NYTYPITLNELAEQFYLSPYYLCREFK 194 Query: 212 RYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSY 271 +Y T +Q IN +R+ A++ T+ SVT+I+ G+S+ + F + ++ +T +P Sbjct: 195 KYTNSTIVQYINSLRVGHAQRLFMETDKSVTEISKIVGFSNVTHFNRVYRSVTGLSPSKS 254 Query: 272 RKKLTE 277 RK+ E Sbjct: 255 RKQAKE 260 >UniRef50_A5ZWD2 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZWD2_9FIRM Length = 298 Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 45/288 (15%), Positives = 94/288 (32%), Gaps = 24/288 (8%) Query: 8 APEIATAREQQLFNGKNFHVFIYNKTESIS-----GLHQHDYYEFTLVLTGRYFQEINGK 62 + RE + +NF + + + +H H+ E L+ G ++ K Sbjct: 6 ILVDSARRELEKHGTENFPMTVNHDDLWSFEGKNVPIHWHNDLEINLIREGEAVFQVYQK 65 Query: 63 RVLLERGDFVFIPLGSHHQSFYE-FGATRILNVGISKRF-------------FEQHYLPL 108 + G+ + H R + + F F+ Sbjct: 66 SYRVRTGEGFLLNRNVPHSCSSPGNEHVRYSTILVRPDFLYGDFGSDVERKCFQPFLQNS 125 Query: 109 LPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVID 168 C + L + V + + + E ++ + + + +++ Sbjct: 126 AIPCIYLTGFDENGKEILQKLNQVEEAFDRKRFCYELKIKGLLCEAFAMILYGHRQELTK 185 Query: 169 DVPQWLKS-----TVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIIN 223 VP L+ + + +L+++ S+E R ++ GKT + Sbjct: 186 FVPANLQELERLEKMLNYLNMHFTEVISLQDLADQVHLSREVCCRLFKKMTGKTITGYLE 245 Query: 224 EIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSY 271 E R+N + ++ YS+T I G+S+PS F F+K P Y Sbjct: 246 EYRVNKSFSLVQSGQYSMTQITEMVGFSNPSRFASAFRKRFGCNPGEY 293 >UniRef50_C7G9X0 Transcriptional regulator, AraC family n=3 Tax=Lachnospiraceae RepID=C7G9X0_9FIRM Length = 303 Score = 193 bits (492), Expect = 4e-48, Method: Composition-based stats. Identities = 56/294 (19%), Positives = 102/294 (34%), Gaps = 22/294 (7%) Query: 5 VINAPEIATAREQQLFNGKNFHVFIYNKTESISG-----LHQHDYYEFTLVLTGRYFQEI 59 T RE + Y H H EF G I Sbjct: 8 TFKITTDETLRETIQHGNNRYPFAYYPDNIWKFDFHRIDWHWHHELEFLYTAEGTALCLI 67 Query: 60 NGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFF--------EQHYLPLLPY 111 ++ L +G +FI G H+ + +T N+ S E++ LP++ Sbjct: 68 GTSKIELHKGCGIFINSGVLHRFEAQS-STFAPNIVFSPTLLAPENSLIYEKYILPVISS 126 Query: 112 CFVASQVYRTNNAFLTYVETV--ISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDD 169 +N ++ + I ++ + E + F + N L+ + + Sbjct: 127 SVPYQVFSPSNTFGKQVLQLLSQICTIQETKPDNELCTIQLLFQLWNILQKNMDWTSDSN 186 Query: 170 V------PQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIIN 223 Q + + E LE + A ++ S+ Q +P+ + Sbjct: 187 SIHRLNHKQARLQAMMQYIHDHYMEEITLETIAASASISKSGALHIFQTGIHCSPVAYLI 246 Query: 224 EIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 + R+ A +QL +T SV+ IA E G++S F + F++ +P YRK+ TE Sbjct: 247 QYRLAQAAEQLYITQKSVSSIAEETGFTSSGYFCRKFRQYYHMSPNEYRKRKTE 300 >UniRef50_C0C2G6 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2G6_9CLOT Length = 299 Score = 193 bits (492), Expect = 4e-48, Method: Composition-based stats. Identities = 46/292 (15%), Positives = 99/292 (33%), Gaps = 23/292 (7%) Query: 7 NAPEIATAREQQLFNGKNFHVFIYNKTESISGL-----HQHDYYEFTLVLTGRYFQEING 61 +E + F + + S H H E +V G Q I Sbjct: 5 KIQTDKEGKELRQPLDGKFPIAAEFQKLSYYAYGLCISHWHPEMELLVVTEGALEQRIGE 64 Query: 62 KRVLLERGDFVFIPLGSHHQS-FYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYR 120 + ++ + VFI H + + + L+ +V + + Sbjct: 65 ETHMIRENEGVFINSHVMHGARMVNREDCSYRVIRFEPALLGGNAKSLIYEKYVKTLQSQ 124 Query: 121 TN-------------NAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLR----HYRE 163 + + + + + RE E V+ + + L H E Sbjct: 125 KDLLYRIVRPEDIQQRRMIDLIYKITDTYVKREVCYELKVQQMMLELWELLYKRTGHVEE 184 Query: 164 EQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIIN 223 + + + + LE++ S+ R ++ + ++PM+ + Sbjct: 185 NAIQMNRELYKIQDALAYIQMYYKNPMTLEDIAGACMLSKSSCCRLFKKVFRQSPMEYVT 244 Query: 224 EIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 RI + + YS+T+IA+E+G+++ S F + F+K+ TP Y+K++ Sbjct: 245 SYRIQQSFMLIADDRYSITEIAYESGFTNSSYFTEMFRKVIGMTPTQYKKEI 296 >UniRef50_C0EG54 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EG54_9CLOT Length = 346 Score = 193 bits (492), Expect = 5e-48, Method: Composition-based stats. Identities = 56/285 (19%), Positives = 116/285 (40%), Gaps = 27/285 (9%) Query: 13 TAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFV 72 + E+ N H+ I H+HD++E V G ++ V+L++GD Sbjct: 54 SFFERDQLISANMHLNI----PMALAPHKHDFFELIYVYQGSVINVVDAHEVVLQQGDLC 109 Query: 73 FIPLGSHHQSFYEFGATRILNVGISKRFFEQHYL-----PLLPYCFVASQVYR------- 120 + + H + N+ I F Q +L + F + +Y+ Sbjct: 110 IMNASAVHTLGKLGKQDTVYNILIKPELFNQAFLGLIAENEIISSFFLNSIYQKSISRNF 169 Query: 121 --------TNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRH-YREEQVIDDVP 171 ++ TYV +I + ++ + +E+ + L Y+ Q + Sbjct: 170 MTFHTQDFPSDDAETYVHRLIMENHFKDIYYNKSIEISLVGLFIELTRGYKHRQDQNSSI 229 Query: 172 QWLKSTVEKM--HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINF 229 + S V ++ + + + + +++ + + YL+ ++Y KT +I+ IR Sbjct: 230 ELGMSNVSQIIAYISDHYKDISIKQVADHFSYHPNYLSSLLKKYTDKTFSEILQNIRFTA 289 Query: 230 AKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 AK+ L+ + + +I + GY++ S F +TFK+ TP YRK+ Sbjct: 290 AKEYLQKLDIPINEIVYMVGYTNKSHFYRTFKQEMGITPAQYRKQ 334 >UniRef50_B9DS09 AraC family regulatory protein n=18 Tax=Streptococcus RepID=B9DS09_STRU0 Length = 307 Score = 193 bits (492), Expect = 5e-48, Method: Composition-based stats. Identities = 43/287 (14%), Positives = 86/287 (29%), Gaps = 19/287 (6%) Query: 10 EIATAREQQLFNGKN-FHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLER 68 E EQ+ F H H E T V G I+ + Sbjct: 7 ETTPNEEQRKHLLPYRFFHNEVKNGRPDILFHWHPELEVTYVCEGTARYHIDYDFFNSQA 66 Query: 69 GDFVFIPLGSHHQSFYEFGATRIL-NVGISKRFFEQHYLPLLPYCFVASQVYRTN----- 122 GD + I H I N + + ++ N Sbjct: 67 GDIILIRPNGMHSIHPIAKEKHITDNFQFHLDMLGLSVVDQVSLHYLQPLQNSVNKFVHC 126 Query: 123 --------NAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYR----EEQVIDDV 170 + + + S E ++ I L +R + Sbjct: 127 IKPHMPGYDDIKACLFDIFSLAKEESRHFEILLKSKLHEFIYLLYFHRYVVKKNTDDTYR 186 Query: 171 PQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFA 230 + + ++ + S+ + +++ G + + + ++R++ A Sbjct: 187 KNEKIRQLIDYINNHYSDNLTIDFLSQFIGYSKTHFMTVFKQHTGTSCTEFVIQVRLSKA 246 Query: 231 KKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 + L + + +IA E G+++ S F + FK+ + TP YRKK T+ Sbjct: 247 CELLIHSTRPILEIANEIGFNNLSNFNRQFKRYYNLTPSQYRKKYTK 293 >UniRef50_UPI0001787F16 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787F16 Length = 280 Score = 193 bits (492), Expect = 5e-48, Method: Composition-based stats. Identities = 54/268 (20%), Positives = 100/268 (37%), Gaps = 13/268 (4%) Query: 21 NGKNFHVFI--YNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGS 78 NF + N + S+ H+H Y+E +L G ++ +++GD + + Sbjct: 12 GDHNFSIQYMSRNGSSSMPRPHEHPYFELYYLLNGERVYFMDDNVFTVKKGDLMIVNPHD 71 Query: 79 HHQSFYEFGA-TRILNVGISKRFFEQH---YLPLLPY--CFVASQVYRTNNAFLTYVETV 132 H + + +G S+ F EQ LL + + + + ++ Sbjct: 72 LHSTASSEKLLFERVLIGFSRTFIEQGDAGVANLLDHGTSRLIRIPLKHQPEIERLLHSM 131 Query: 133 ISSLNLRETGLEEFVEMVTFYVINRLRHY-----REEQVIDDVPQWLKSTVEKMHDKEQF 187 ++ +T V + ++ RL + + S + + Sbjct: 132 LAECQTEQTHYSSLVRSLMNELLIRLHRIETTLQSQTHEYEHPMHQKISEIAQYIKSNFH 191 Query: 188 SESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFE 247 + LE + S YL+R R G + + +RI A+K L + SV I+ Sbjct: 192 EKLTLEQVAKQFYISPSYLSRVFTRLTGFHFREYVQVVRIREAQKMLVSSRDSVQIISEL 251 Query: 248 AGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 AG+ + F KTFKK+ TP YRK+ Sbjct: 252 AGFEHIAHFNKTFKKIAGTTPLQYRKRH 279 >UniRef50_C0FP55 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FP55_9FIRM Length = 279 Score = 193 bits (492), Expect = 5e-48, Method: Composition-based stats. Identities = 48/254 (18%), Positives = 96/254 (37%), Gaps = 10/254 (3%) Query: 35 SISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYE-FGATRILN 93 + H H YYE +L+G IN L GDFV IP + H+ Y+ + N Sbjct: 25 HMDRFHYHPYYEIYFLLSGNCSALINHSIYHLVPGDFVLIPQSAMHRFVYDCNSTVKRYN 84 Query: 94 VGISKRF----FEQHYLPLLPYCFVASQVYRT---NNAFLTYVETVISSLNLRETGLEEF 146 + + F F +L + F ++ T +T+ +++ + Sbjct: 85 LFFTMDFAASLFHSDTKDILEHLFHYPVLHLTSLLQGNATRLFDTLYQETVGQDSCSQAV 144 Query: 147 VEMVTFYVINRLRHYREEQVIDDVP--QWLKSTVEKMHDKEQFSESALENMVALSAKSQE 204 + +++ L R+ + D+ + + +L + S Sbjct: 145 IPAYISLILSLLVRNRDHIQLQDLDSAENAIQASARYISTHFQEPVSLHMVADYVHMSPT 204 Query: 205 YLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLT 264 Y ++ ++ G + + + R+ A + L T+ +VT+IA G++ + F F+K Sbjct: 205 YYSKKFKQITGVGFKEYLTKTRLYEATELLTHTSLNVTEIAIRCGFNDGNYFGDAFRKEF 264 Query: 265 SFTPKSYRKKLTEF 278 +P YRK+ Sbjct: 265 GLSPLQYRKRQKNL 278 >UniRef50_A8SS52 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SS52_9FIRM Length = 300 Score = 193 bits (491), Expect = 6e-48, Method: Composition-based stats. Identities = 56/273 (20%), Positives = 94/273 (34%), Gaps = 15/273 (5%) Query: 17 QQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPL 76 F+ + ++ H HD E ++L+G+ ++ G+ FI Sbjct: 22 IHQFDFAAYDADMHQFISGCIPPHWHDELEVFVLLSGQVEVVTGDISCIVNAGEGCFING 81 Query: 77 GSHHQSFYEF-GATRILNVGI--------SKRFFE-QHYLPLLP--YCFVASQVYRTNNA 124 G H G R + F+ ++ P + + FV + Sbjct: 82 GVLHTFRALSLGECRYHSFVFESSIVAGAPGSIFDTKYMKPFVEKGHSFVHMKRDEGMEP 141 Query: 125 FLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM--- 181 F + + E + +I + D+P + ++ M Sbjct: 142 FFEEFDRCFDACAGEGYAYEFDIRDSLTRMILCIAQNMNAPGDSDMPHLAEVRIKDMLGW 201 Query: 182 HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSV 241 D+ E + + + R +Y PM+ + RI A + L T+ V Sbjct: 202 IDRNLKDEITVSGIAGSANICVRECQRIFSQYVHYRPMEYVQRRRITLAAELLRTTHRQV 261 Query: 242 TDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 TDIA E G+SS S FIK FK + TP YRKK Sbjct: 262 TDIALECGFSSVSYFIKQFKNIVGCTPTGYRKK 294 >UniRef50_C9A5Y7 Putative uncharacterized protein n=3 Tax=Enterococcus casseliflavus RepID=C9A5Y7_ENTCA Length = 279 Score = 193 bits (491), Expect = 6e-48, Method: Composition-based stats. Identities = 47/280 (16%), Positives = 89/280 (31%), Gaps = 7/280 (2%) Query: 6 INAPEIATAREQQLFNGKNFHVFIYN-----KTESISGLHQHDYYEFTLVLTGRYFQEIN 60 + E N IY K LH HD + V G + I+ Sbjct: 1 MYFKRTKENEETTKHTTTNRSFAIYQRCLQQKRGDQLPLHWHDELQIVWVEEGSFVYTID 60 Query: 61 GKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYR 120 +++LL + + + I H + R S F V + Sbjct: 61 DEQILLNKNETIIINSRVLHGAVLASENVRYCCFDFSSGFIADPVFKEAIEQLVHDRTRS 120 Query: 121 TNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEK 180 LT +E+ + + L + + + + Sbjct: 121 YRRLTLTAQHQAFVQTVRLPLLIEQRFT-LYELFLAALSQLMAARPASPKKETIYLMLAF 179 Query: 181 MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYS 240 +H+ + + +A + T ++Y TP+ + + R++ AK L T Sbjct: 180 VHE-HYQEPLTVPAIAKAAAINTRTCTALFRQYTTLTPINYLIDYRLSQAKNLLIETEEP 238 Query: 241 VTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 ++ I + G++ S F K F++ TP YRK E ++ Sbjct: 239 ISTICYHVGFNHLSYFSKRFQRKFGLTPLQYRKTYREDDR 278 >UniRef50_Q0ST06 Transcriptional regulator, AraC family n=13 Tax=Clostridium RepID=Q0ST06_CLOPS Length = 686 Score = 192 bits (490), Expect = 7e-48, Method: Composition-based stats. Identities = 51/275 (18%), Positives = 102/275 (37%), Gaps = 15/275 (5%) Query: 15 REQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFI 74 +E F + V I LH HD E VL G +I+ ++ + + Sbjct: 3 KEYVNFPS-DIPVTISYVNIKNYPLHWHDAIEILYVLKGSIKVDIDTDSYEIQEDEIEIV 61 Query: 75 PLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVAS------QVYRTNNAFLTY 128 H+ + R+L I FFE++Y + F + Q + + + Sbjct: 62 NTEQTHRIYS-NKDNRVLIFKIDPHFFEKYYSDIENMFFYTNTSDEGAQSDESYDKLRVF 120 Query: 129 VETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQW-------LKSTVEKM 181 + ++ + ++++E ++ L + + D+ + K Sbjct: 121 LSIILCEEAQKVDDYDKYIEKSLVELLFHLLNNFHYLLYDNDEIHENNMLLERYHRISKY 180 Query: 182 HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSV 241 L+++ S YL+ + G + ++N R+ + K L T+ S+ Sbjct: 181 IYNNYNKNITLKDIANTEFLSTHYLSHEIKYATGLSFTDLLNLTRVEESVKLLLDTDKSL 240 Query: 242 TDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 ++I++E G+S F K FK + TP +RKK Sbjct: 241 SEISYEIGFSHTRYFNKHFKAYYNCTPLQFRKKHK 275 >UniRef50_A5I5L7 AraC-family transcriptional regulator n=10 Tax=Clostridium RepID=A5I5L7_CLOBH Length = 688 Score = 192 bits (490), Expect = 7e-48, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 102/268 (38%), Gaps = 14/268 (5%) Query: 22 GKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQ 81 + + + + S +H H+ E VL G I + + + + I H Sbjct: 9 TNDLPIKVSMQNIKKSPIHWHNAMEVIYVLEGSIKITIETESHRVNKQEIGIINPEEAHS 68 Query: 82 SFYEFGATRILNVGISKRFFEQHYLPLLPYCFVAS------QVYRTNNAFLTYVETVISS 135 ++L I FF ++Y + F Q + + Y+ T++ Sbjct: 69 IKSITNNNKVLIFQIDTSFFNKYY-DIENMFFYTDFSAPEAQKHEKYDVLRKYLSTLLCE 127 Query: 136 LNLRETGLEEFVEMVTFYVINRLRHY-------REEQVIDDVPQWLKSTVEKMHDKEQFS 188 + + E+ VE + ++ L + EE ++V + K + Sbjct: 128 IAQKGDNYEDVVEEILVDLLYHLINNFHYLIYDEEELKENEVQFERYDRIIKYIYSNYNN 187 Query: 189 ESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEA 248 + +++++ L S YL+ + G + +N R+ A K L T+ ++++I+ E Sbjct: 188 KISIQDIARLEFLSSHYLSNEMKNKVGYSFNDFVNLTRVEEAIKLLLDTDKTISEISEEL 247 Query: 249 GYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 G+S F K FKK TP YRKK Sbjct: 248 GFSHTRYFNKHFKKHYKCTPMQYRKKYK 275 >UniRef50_B0A839 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A839_9CLOT Length = 303 Score = 192 bits (490), Expect = 9e-48, Method: Composition-based stats. Identities = 44/287 (15%), Positives = 101/287 (35%), Gaps = 24/287 (8%) Query: 7 NAPEIATAREQQLFNGKNFHVFIYNKTESIS-----GLHQHDYYEFTLVLTGRYFQEING 61 + E++ + F + T H H F+++L G +N Sbjct: 4 KIVVASNLLEKKNYGDYTFPIDFDYNTLFAYEYGFLDYHWHYEMTFSVILEGSMEYRVND 63 Query: 62 KRVLLERGDFVFIPLGSHHQSF-YEFGATRILNVGISKRFF--------EQHYLPLLPY- 111 K +++GD +FI + H + Y L + F + Y+ ++ Sbjct: 64 KIYEMKKGDGLFINSHTLHTAKGYNNKDCAFLALMFRPNFIFGHEESIIKTKYIDIIENG 123 Query: 112 ----CFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRH-----YR 162 F + +T+ ++ V + E V+ + + + + Sbjct: 124 GQCPSFFFNSNNKTHQKIMSLVLEANDIFQNKGPCYELLVKSKVCEIWSLFFNEVSFILQ 183 Query: 163 EEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQII 222 E+ V + S + ++ L+++ S+ R ++ +TP + + Sbjct: 184 EDNVSNSNDVVRLSKILNFIHSNYKNKITLDDISECCNISKSECCRFFKKATRQTPFEYL 243 Query: 223 NEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPK 269 RI + L Y++T+I+ G+S+ S + + FK++ +P Sbjct: 244 LNYRIKKSIPLLLSDQYNITEISESVGFSNASYYTEIFKRVMDLSPT 290 >UniRef50_C7GHF4 Transcriptional regulator, AraC family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GHF4_9FIRM Length = 291 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 44/258 (17%), Positives = 95/258 (36%), Gaps = 23/258 (8%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGA---------- 88 H HD+ E +L+G +I + + GD + + G HQ+ + Sbjct: 32 YHSHDFIEMAFILSGHGKYKIADRLYDVSEGDIIILNPGQKHQALCTDPSNPATEFFVGL 91 Query: 89 TRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLR----ETGLE 144 + + + H L S + T+ + + +++++ +G Sbjct: 92 CDVRFGDFPENYLPLHLKDLTSDPATQSPILHTSGELRQKLFKICTAMSVENDVCRSGRY 151 Query: 145 EFVEMVTFYVINRLRHYREEQVI--------DDVPQWLKSTVEKMHDKEQFSESALENMV 196 ++ ++ L + E V +++ + + + +L+ + Sbjct: 152 IMLKSYLMQMLILLLREQSEPVKINTGCSFESTSKKYVVDQIVNYFEDHYSEKISLDQIA 211 Query: 197 ALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMT-NYSVTDIAFEAGYSSPSL 255 S Y++R + G TP++ + IR+ AK+ LE + S+ ++A + GY Sbjct: 212 ENMYLSPFYISRIFKSETGDTPIRHLINIRLEKAKELLENGFDGSIQEVAAKVGYDDVYH 271 Query: 256 FIKTFKKLTSFTPKSYRK 273 F K FKK P R+ Sbjct: 272 FSKLFKKRFGMPPSKIRR 289 >UniRef50_A5ZHU6 Putative uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZHU6_9BACE Length = 284 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 46/282 (16%), Positives = 91/282 (32%), Gaps = 22/282 (7%) Query: 12 ATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDF 71 E + + F + T + LH+HD +E V+ G + GD Sbjct: 8 YELPEVENHSF--FFIDQRVTTSIEAKLHRHDAWELYYVVHGYGKRMAGDTLQPFAAGDV 65 Query: 72 VFIPLGSHHQSFYEFGA------TRILNVGISKRFFEQ------HYLPLLPYCFVASQVY 119 IP H Y + R L V S E+ L + Sbjct: 66 ALIPPSMLHHWEYSPDSADDDGYVRYLMVAFSHSLVERCMAVFPELRNRLTGITFPTNAL 125 Query: 120 RTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQV-----IDDVPQWL 174 + + ++S +N + E F ++ + + + Sbjct: 126 KFGTGSSQTIRRILSQMNDMD---ELGRLCEMFRLLPAIFTSSDHTFAGKPMNIERDVRR 182 Query: 175 KSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQL 234 + +L+++ A ++ +R G T Q + + R+N A + L Sbjct: 183 MQQICVYVMTHYIHTISLDDIAAEVGMNRSAFCSYFKRCKGMTFSQYVTQYRLNTACELL 242 Query: 235 EMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 + + V++I F G++ F++ FK +P YR++ Sbjct: 243 KHSQKQVSEICFTVGFNDLPHFVRVFKNTLGMSPSKYRRRFQ 284 >UniRef50_D1N597 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N597_9BACT Length = 279 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 52/262 (19%), Positives = 97/262 (37%), Gaps = 11/262 (4%) Query: 22 GKNFHVFIYN-KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH 80 + + ++ + GLH+HD +E + G IN + RGD + H Sbjct: 11 SPDLPLAVWPVQKAGAIGLHRHDCFELVFITRGTGLCRINDLSYPVLRGDVYILNPHDTH 70 Query: 81 QSFYEFGATRILNVGISKRFF--EQHYLPLLPY------CFVASQVYRTNNAFLTYVETV 132 + N+ + E PLL + +A + + Sbjct: 71 CYEMAS-SCTFYNILFRRELLQHEPALTPLLDDWESRTDRKLYQLENDETDAEEFRFQEI 129 Query: 133 ISSLNLRETGLEEFVEMVTF-YVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESA 191 I L R G E V + +++ LR E+ I + S V + + S + Sbjct: 130 IVELKKRLPGYEAAVRALFAVFLVRLLRRGNCERHIPPGHRPSASKVFEYINAHLGSTIS 189 Query: 192 LENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 L + ++ S A +++ G + I +RI A++ LE ++ +IA G+ Sbjct: 190 LRELAGVAGMSTPAFAGAFRQWTGNSVPGHIGALRIRQARRLLEERKLTIGEIALRLGFY 249 Query: 252 SPSLFIKTFKKLTSFTPKSYRK 273 F + F+K T +P+ YR+ Sbjct: 250 DTCHFSRVFRKKTGLSPREYRQ 271 >UniRef50_UPI0001788B1F transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788B1F Length = 292 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 42/281 (14%), Positives = 91/281 (32%), Gaps = 12/281 (4%) Query: 6 INAPEIATAREQQLFNGKNFHVFIYNKTE-SISGLHQHDYYEFTLVLTGRYFQEINGKRV 64 + + + V +++ LH H++YE + V+ G +NG Sbjct: 1 METKQPPRLTNEDYRLQPRAPVQVFHGIHPGTIPLHWHEFYELSYVVGGEGEHRLNGSAY 60 Query: 65 LLERGDFVFIPLGSHHQSFY-EFGATRILNVGISKRFFEQHYLPLL---PYCFVASQVYR 120 L G + H+ E I NV ++ + + L A Sbjct: 61 PLSSGTLFLLTPADFHELVSVEDKPLEIYNVIFTEAMMDDNLYHWLFGGKLVLHAQLEEM 120 Query: 121 TNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRH-------YREEQVIDDVPQW 173 + E + G E + ++ L + Sbjct: 121 QHRQIFADYERMREETGASREGSEIAIRATLQRLLVDLNRGSTANCALPTNGTGNRQLNV 180 Query: 174 LKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQ 233 + LE+ A + S Y + + G++ + + +R+ FA+ Sbjct: 181 NLQRALIYIHHHFREDLRLEDAAAQAQYSATYFSECFSKSVGQSFQRYLQNVRMQFAESL 240 Query: 234 LEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 L +++ VT+I + +G+++ F + F++ +P+ YR Sbjct: 241 LRVSSLPVTEICYASGFNTLGHFERVFRQRKGMSPRQYRHH 281 >UniRef50_B0A7K6 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7K6_9CLOT Length = 297 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 95/261 (36%), Gaps = 19/261 (7%) Query: 33 TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRIL 92 ++ LH HD + ++V G + K +L+ G +FI H + I Sbjct: 36 SKGYVKLHWHDEIQISIVTKGSVEFIVGEKSYILKNGQAIFINTQRIHMAKSVGDEDCIY 95 Query: 93 NV---------GISKRFFEQHYLPLLPYCFVASQVY-----RTNNAFLTYVETVISSLNL 138 + EQ Y+ + + + L Y+ +I+ + Sbjct: 96 HAIMFNAKLLKMFPGSIIEQKYIDPVITSNKLNSIEIYGNNNWEQDALKYISDIINVDII 155 Query: 139 RETGLEEFVEMVTFYVINRLRHY-----REEQVIDDVPQWLKSTVEKMHDKEQFSESALE 193 ++ G E + + L ++ + + V + ++ L+ Sbjct: 156 QDKGYELKIYIDLLNFWLLLVLNDKDIFNQKMEPKPINEQRIKDVLSFIHQNYSNKITLQ 215 Query: 194 NMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSP 253 ++ S+ R ++ +P + RIN + K L+ ++ S+ DI+ G+++ Sbjct: 216 DIADAVFVSKGECCRFFKKSLKMSPYDYLINYRINESMKLLKNSSLSILDISENVGFNNV 275 Query: 254 SLFIKTFKKLTSFTPKSYRKK 274 S +I+ FKK T TP YR Sbjct: 276 SHYIQIFKKKTGQTPLEYRNS 296 >UniRef50_C4IBD9 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IBD9_CLOBU Length = 302 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 47/298 (15%), Positives = 104/298 (34%), Gaps = 28/298 (9%) Query: 5 VINAPEIATAREQQLFNGKNFHVFIYNKT-----ESISGLHQHDYYEFTLVLTGRYFQEI 59 V A E + F + +Y +I H H EF ++ G+ Sbjct: 3 VNKVTVDANLLETTSHGNREFPMDVYRDDFSKYYTNIINWHWHPEIEFVMITKGKIEYST 62 Query: 60 NGKRVLLERGDFVFIPLGSHHQSFYEFG--ATRILNVGISKRFFEQHYLPLLPYCFV--- 114 + ++L GD +FI + H + G + + +V +S + ++ +V Sbjct: 63 EEETLILREGDGIFINSNTLHMAKSIDGYQDSLMFSVVVSPKLIYNDTESIIYKKYVKPI 122 Query: 115 ----------ASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRL------ 158 + L+++ + + E G E ++ + + Sbjct: 123 VECSKLSYLKLDKYNTWQKQILSHLLYIDALKFNEEHGFEFIIKNQISLIWQLIALNTSH 182 Query: 159 --RHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGK 216 H + Q + + K F+ ++++ + S+ R ++ Sbjct: 183 LYLHNNCLINSHSLSQERLKQMLRFIHKNYFNNITIDDIAKSANISRSECFRCFKKMINT 242 Query: 217 TPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 P + + R+ + + L T+ V+DI + G++ S + K F++ +P SYRK Sbjct: 243 KPFSYLTDFRLEKSLQLLLETDIPVSDICYSCGFNHSSYYGKLFREKFGISPSSYRKS 300 >UniRef50_B8DFE8 Transcriptional regulator, AraC family n=18 Tax=Firmicutes RepID=B8DFE8_LISMH Length = 292 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 50/286 (17%), Positives = 94/286 (32%), Gaps = 26/286 (9%) Query: 19 LFNGKNFHVFIY-NKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLG 77 K F + N+ E + H H E L G +N + L+ G+ I G Sbjct: 8 PELNKAFPFRSFVNEGEVLVYPHWHKEIEIIYALKGSLNLGVNDMPIQLKEGEIQVINGG 67 Query: 78 SHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNN-----------AFL 126 H F ++ + + F++ + + + Sbjct: 68 DVHY-FLASPSSERVVIQFDLSLFQEEMQMDDQMQTLREMLTEMAHLSREWPEETVAKMQ 126 Query: 127 TYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEK------ 180 + + + + + G ++ +I + + + V K Sbjct: 127 SLIMNIHEESSGEKPGKHYILKADLLAIIGLIYREIPQIKTQPDSVISEEAVLKSQETLH 186 Query: 181 -------MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQ 233 +K +L+ + + S Y T+ +R G T + +N+ R+N AK Sbjct: 187 KLDQIFSYVEKHYQEPVSLQEVANYTGFSTYYFTKFFKRNTGMTFVTFLNDYRLNKAKWM 246 Query: 234 LEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFN 279 L + VT++A AG+SS F FK+ P YRK + N Sbjct: 247 LLNEAFPVTEVAELAGFSSVKTFHHAFKRAMGVAPLKYRKTIYGNN 292 >UniRef50_B0MR68 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MR68_9FIRM Length = 301 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 56/289 (19%), Positives = 94/289 (32%), Gaps = 22/289 (7%) Query: 7 NAPEIATAREQQLFNGKNFHVFIYNKTESISG-----LHQHDYYEFTLVLTGRYFQEING 61 T RE + + Y + H H EF V G + G Sbjct: 9 RIITDETLRETASHGSEEYPFCYYYEDIWDFDFHCIDWHWHPEVEFVYVQQGMADFLVGG 68 Query: 62 KRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFF--------EQHYLPLLPYCF 113 R +L GD +FI H+ F + I N+ S ++ P++ Sbjct: 69 NRYVLSSGDGIFINSQVIHR-FEATDSAIIPNIVFSPVLLAPQGSLIYSRYIRPIIESTT 127 Query: 114 VASQVYRTNNAFLTYVETVISSLNLRETGLEEFVE--------MVTFYVINRLRHYREEQ 165 A + +ET+ S ++ +G ++ Y + Sbjct: 128 ECVIFSAEETAHRSIIETMRSVFAVQGSGTASEMKTAELLLKLWRLLYESILITDCGSMS 187 Query: 166 VIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEI 225 V Q + + + L+++ S+ + + Y +P+ + E Sbjct: 188 VHSAQTQAKLQIMMQYIHDNYSGQITLDDIARTVLISKSSVLNIFRTYLHTSPINYVVEY 247 Query: 226 RINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 R+ A K L T SV IA E G+ + F + FKKL TP YR Sbjct: 248 RLKCASKLLVDTENSVCTIAHETGFENIGYFCRRFKKLYGVTPIYYRNH 296 >UniRef50_UPI0001B9EDE0 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9EDE0 Length = 282 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 50/276 (18%), Positives = 95/276 (34%), Gaps = 19/276 (6%) Query: 18 QLFNGKNFHVFI----YNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVF 73 +L + + I + H H E L LTG+ + K+ + GD Sbjct: 2 RLHIAYDHPIAINAFEWTPATYRQPPHVHASLEIGLCLTGKGYFFFGNKQYAAKPGDLFL 61 Query: 74 IPLGSHH-QSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTN--------NA 124 + H +R L + LL S + + Sbjct: 62 VNNDERHIAQSAPDDPSRYLFINFDPALLLAEEPGLLLPFSYRSTHFCNHIMGGSPLAKQ 121 Query: 125 FLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEK---- 180 +V + L + G + + RL + + + DD + +V + Sbjct: 122 LTPWVLAIAEELREKSPGYLAMAKSALIQLCCRLLRHYDGLLTDDERHHMVHSVRQAQSL 181 Query: 181 --MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTN 238 + + +L + S ++RA G + ++ +R+ AK++L T+ Sbjct: 182 AALVEHRYHEPVSLGELADELGLSISRVSRAFLETTGYRFSEYVSLLRVQAAKRELAGTD 241 Query: 239 YSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 +V DIAFE G+ S F + FK++ +P YR+ Sbjct: 242 RAVADIAFECGFQSLPTFYRVFKEIVGLSPIRYRQS 277 >UniRef50_C6CV13 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CV13_PAESJ Length = 285 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 46/283 (16%), Positives = 94/283 (33%), Gaps = 19/283 (6%) Query: 8 APEIATAREQQLFNGKNFHVFIYN---KTESISGLHQHDYYEFTLVLTGRYFQEINGKRV 64 I T + F + I + LH H E + G + ING R Sbjct: 1 MKPIPTVTRDLIELPPAFPIVISQSEGVSPLFQRLHWHTALEINYISRGSGYYLINGTRY 60 Query: 65 LLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFF-------EQHYLPLLPYCFVASQ 117 GD + I H++F E + + +F + +P Sbjct: 61 DFREGDILLINSNDLHRAF-ENEGLVMTIIMFDPAYFALEQRYDTELLIPFREIGMRFDN 119 Query: 118 VYRTNNAFLTY----VETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQW 173 + + L +E + RE E + + + Y ++ + Sbjct: 120 MLDRGHPILPRLGAAIEEMRCEFAGREPHYEAVIRSQLVQFMAFVNRYFAKEQERRSSRI 179 Query: 174 LKSTVEKM----HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINF 229 + ++ + + L+ + A + S + + G +PM + ++R++ Sbjct: 180 RGMEIVRLTLNTIEADIAYPWTLKELAAAAHLSPSRFSALFVQTVGTSPMDYLIQLRLSA 239 Query: 230 AKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 A LE ++ + ++A AG+ + S F + FK+ P R Sbjct: 240 AVSLLESSDKKIIEVAESAGFRNLSNFNRLFKQHIGKQPSELR 282 >UniRef50_C0EIV3 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIV3_9CLOT Length = 307 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 49/272 (18%), Positives = 105/272 (38%), Gaps = 12/272 (4%) Query: 11 IATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 + E + + N+ ++ + H H+ E L+ TG +N + ++GD Sbjct: 1 MKAFHEVRSYRS-NYSLWHSTYQDISFLAHWHNEIELILLRTGSSSISVNDRTFEAQQGD 59 Query: 71 FVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFL---- 126 + G H S I + Q+Y LL + + + + Sbjct: 60 LIICNSGDIHYSDAANQQNTIDFIVFDPALLGQNYPSLLCPQHLIPGGFLQEHRLIAPLD 119 Query: 127 TYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEK------ 180 +ET+ + L+ ++ +E + RLR ++ D Q +S Sbjct: 120 HLIETIDAELDEKQLYYQEIITAALREFWFRLRRCIPDEPSDVHLQGQRSEFLYAFHQLL 179 Query: 181 -MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNY 239 ++ + LE ++ S Y ++ +R G + +N +RI A L+ ++ Sbjct: 180 GFLEEHFSEDIPLETAASMIGYSTGYFSKTFKRLIGINYITYLNMLRIEHAVSCLQSSSD 239 Query: 240 SVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSY 271 + DIA + G+ + F +TF+++T ++P + Sbjct: 240 KIIDIALQCGFHNIRTFNRTFREITGYSPTEF 271 >UniRef50_Q9S309 Putative AraC-type Regulator n=1 Tax=Ruminococcus flavefaciens RepID=Q9S309_RUMFL Length = 282 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 53/281 (18%), Positives = 105/281 (37%), Gaps = 17/281 (6%) Query: 7 NAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLL 66 ++ E + + F + N H H+ E + L + G L Sbjct: 1 MIKNLSGDYETVEYENQRFVMLYDNDEIEEYPTHWHNAVEVIIPLHNGFTVTAGGVDYHL 60 Query: 67 ERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFE-----QHYLPLLPYCFVASQVYRT 121 + + IP G H + G R + + +P+ F + Sbjct: 61 NEKEIIIIPPGELHSMPAQEG--RRIIFQCDNSIISDVPALEAIVPVFSEAFHITPTISK 118 Query: 122 NNAFLTY--VETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVID--------DVP 171 L+ + + S + + + + + ++ +R Y+ Q D Sbjct: 119 ELYILSRKSILDIYSEYYSKSSLSDVRIYLCLIKMLTSVREYQLTQAADAFSGELGGRDD 178 Query: 172 QWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAK 231 S V K ++ E LE + +++ S+ + +R ++Y + +Q IN RI A+ Sbjct: 179 TRKFSMVMKYINQNYMYEIPLEKIASIAGYSKYHFSRIFKKYNNVSYIQYINSKRIKAAE 238 Query: 232 KQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 + L N SVT++A AG++S + F + FKK + TP ++ Sbjct: 239 RLLIDPNLSVTEVAMRAGFASLTTFNRAFKKAKNCTPTEFQ 279 >UniRef50_C6CVW1 Transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6CVW1_PAESJ Length = 294 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 54/294 (18%), Positives = 106/294 (36%), Gaps = 26/294 (8%) Query: 10 EIATAREQQLFNGKNFHVFIY--------NKTESISGLHQHDYYEFTLVLTGRYFQEING 61 E F + F +Y + + LH H+ + TL G +ING Sbjct: 1 MGKQLYEAIRFPDETFPYIMYTHTIHRSIPEGRGFNDLHWHEELQITLATKGNLTIQING 60 Query: 62 KRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFF--------EQHYLPLLPYCF 113 L G +FI H ++ ++ E++Y+ + Sbjct: 61 IDYRLHTGQAIFINKSVLHIVTDLTAEGEYVSFNFPEKLLAFYSDSAMEKNYVLPFTNSY 120 Query: 114 VASQVYR----TNNAFLTYVETVISSLNLRET---GLEEFVE---MVTFYVINRLRHYRE 163 + S + L + ++ ++++ E ++ + + N E Sbjct: 121 LLSFEIKGDTEWQKQILNILWSMKKEFEIKKSWGWQYEISIKTVQLWLILISNISLPSEE 180 Query: 164 EQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIIN 223 + + Q + + + L+ + + S TR+ + TP + Sbjct: 181 SSKHNRLKQERLQLMLSFIHQNYSNPITLKEIADAAHLSVSECTRSFKTSIRMTPYSYLV 240 Query: 224 EIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 + RIN + + L+ T Y++T+IA G++ + FI+ FKK TPK +RK TE Sbjct: 241 KYRINKSCELLQSTEYTITEIASRVGFNQVNHFIQAFKKDLKLTPKEFRKNRTE 294 >UniRef50_C6LL87 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LL87_9FIRM Length = 287 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 53/284 (18%), Positives = 109/284 (38%), Gaps = 16/284 (5%) Query: 7 NAPEIATAREQQLFNGKNFHVFIYNKTE-SISGLHQHDYYEFTLVLTGRYFQEINGKRVL 65 + E + K+ + ++N H H +E + Y K + Sbjct: 1 MIENLVGLHETVNYR-KDMQIRLHNNDVCENYPPHWHTPFELIMPTESGYSVHCGEKEYV 59 Query: 66 LERGDFVFIPLGSHHQSFYEFGATRILNV----GISKRFFEQHYLPLLPYCFVASQVY-R 120 L+ GD + I G H+ F RI+ + I + + + P ++ + + + Sbjct: 60 LDEGDIIIICPGVIHELFSPPKGVRIIFLVSLAQIDLQELDLVISMISPAILISPEKFPQ 119 Query: 121 TNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINR-------LRHYREEQVIDDVPQW 173 + + + E + ++ + + E + ++ Sbjct: 120 IHAQIHRLMLEIRDEYFRNLPYTESSIYAKFLEILVLVGRCYAEIAQHNFEAKNNKQQEY 179 Query: 174 LKST--VEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAK 231 ++ + ++ +LE + +L+ S+ + TR ++Y T + +N+ RI AK Sbjct: 180 MEKFLFICNYINEHYAEPLSLEEVASLAGFSKYHFTRLFKQYADTTFYKYLNQKRIAHAK 239 Query: 232 KQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 L N SV DI+ + G+S+ S F++ F+KLT FTP RK Sbjct: 240 HLLVDKNLSVLDISLQCGFSNLSSFLRMFRKLTGFTPTELRKMY 283 >UniRef50_C6LH72 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LH72_9FIRM Length = 294 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 52/288 (18%), Positives = 102/288 (35%), Gaps = 20/288 (6%) Query: 6 INAPEI--ATAREQQLFNGKNFHVFIYNKTESISGL----HQHDYYEFTLVLTGRYFQEI 59 +N+P A E+ +N F ++I S G H H EF ++ G I Sbjct: 1 MNSPLEVSADFSERLHYNLAGFPLYIKKDKLSRYGYEALCHWHPDLEFIYIIDGAMDYFI 60 Query: 60 NGKRVLLERGDFVFIPLGSHHQSFY-EFGATRILNVGISKRFF-----------EQHYLP 107 NG R+ + +G +F+ H F + + + + F EQ + Sbjct: 61 NGNRIPIRQGQVIFVNSRRLHYGFSRQKEECTFIALVVHPSLFTNSFDKAWIFAEQKFGF 120 Query: 108 LLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVI 167 + + ++ + +N + + H + Sbjct: 121 ANVDYILLDSHISWQKKMIEGIDRIYREINAASFNPLRLLAEAISICADAGEHIETMESS 180 Query: 168 DDVPQWLKS--TVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEI 225 + + + + L+ + A + + ++Y +P+ + + Sbjct: 181 GKHNVTQMAFLNMTEYIQNNYREKLTLDKIAGAGAVCRSKSCQLFRQYVRMSPVAYLTKY 240 Query: 226 RINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 R++ + + L T SV++IA G+ SPS +I FKK T TP +YRK Sbjct: 241 RLSKSAELLRDTELSVSEIASLCGFQSPSYYINLFKKETGQTPLNYRK 288 >UniRef50_C0X5H9 AraC family transcriptional regulator n=22 Tax=Enterococcus faecalis RepID=C0X5H9_ENTFA Length = 272 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 47/258 (18%), Positives = 96/258 (37%), Gaps = 11/258 (4%) Query: 25 FHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFY 84 + +N+ H H++ E +++L G + G++ G + H Sbjct: 15 YAFDPWNEETHPYNCHHHEFLEISILLEGESEYIVQGQQYHATAGTVFLFNPRTEHGEQQ 74 Query: 85 EFGAT-RILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGL 143 + G L++GIS + E + P + + AFL ++ LN +E Sbjct: 75 KAGTYSHQLHIGISNLYLEGLARNVFPNKSALLDLSHLHGAFLEKAWQIVHELNHQEVES 134 Query: 144 EEFVEMVTFYVINRLRHY----------REEQVIDDVPQWLKSTVEKMHDKEQFSESALE 193 ++ + ++ + + + L + + E LE Sbjct: 135 ALQIKALVIELLVYILRSLAVDQENKIETRLSKTEKRKRNLVNHTIYYLETHHDEEITLE 194 Query: 194 NMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSP 253 + + + YL++ + G P+ + +IR+N AK+ L+ + SV ++A GY Sbjct: 195 QLAEMLYVTPTYLSKTFKAATGVGPINYLIQIRLNHAKELLKNDSLSVKEVAKTVGYEDA 254 Query: 254 SLFIKTFKKLTSFTPKSY 271 F K FKK +P + Sbjct: 255 YHFSKLFKKYYGKSPSQF 272 >UniRef50_C6J998 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J998_9FIRM Length = 311 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 52/287 (18%), Positives = 97/287 (33%), Gaps = 22/287 (7%) Query: 7 NAPEIATAREQQLFNGKNFHVFIYNKTE-----SISGLHQHDYYEFTLVLTGRYFQEING 61 E + ++ Y H H +EF V +G I Sbjct: 9 KILTDEEFMEIKQHGSSDYPFQYYYDNLELFDFHCIEWHWHREFEFLYVESGEVTCGIGE 68 Query: 62 KRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFF--------EQHYLPLLPYCF 113 K+++L G+ +FI H+ + G I N F +++ LP++ Sbjct: 69 KQIILSEGEAIFINSKILHRFYAPSGG-IIPNFVCMPEFIAPENSLIYKKYILPIISSNI 127 Query: 114 VASQVYRTNNAFLTYVETVIS--SLNLRETGLEEFVEMVTFYVINRLRHYREE------Q 165 + ++T+I + E E + + + Q Sbjct: 128 YFQRFQTDELWQTKIIQTMIKIMEIQGNEKIRELATLALMQDLWLTFYENVKLSDKGDVQ 187 Query: 166 VIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEI 225 +D+V Q + + + +L+ + + S+ R+ TP+ + Sbjct: 188 TVDEVAQKRVQLIMQYIHENYNHNLSLDEIASHIGISKSTALNLFHRFLHTTPVNYLIGY 247 Query: 226 RINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 R+ A L+ TN V IA+E+G+ + F + FKK TP YR Sbjct: 248 RLQAASWLLKNTNKKVKTIAYESGFHNVDYFCRLFKKRYHLTPSEYR 294 >UniRef50_C8P2X0 Putative uncharacterized protein n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P2X0_ERYRH Length = 273 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 46/251 (18%), Positives = 96/251 (38%), Gaps = 8/251 (3%) Query: 32 KTESISGLHQHDYYEFTLVLTGRYFQEI-NGKRVLLERGDFVFIPLGSHHQSFYE-FGAT 89 ++ S LH H + E V+ G + + ++ ++ D + I H + G Sbjct: 25 DSDWHSTLHSHPFAELMYVVRGSGYFRFADNLKLPIQADDLIIINPNVLHTECSDAEGGL 84 Query: 90 RILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEM 149 + +GI F + + L Y++ ++ + + E VE Sbjct: 85 EYIVLGIDGVEF--YTEQNAHPGVSIHNYEDYKHEILFYIKAILEAGKTHDEMSELIVEN 142 Query: 150 VTFYVINRLRH----YREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEY 205 + ++ + + +E + L+++ +L+ ++ Y Sbjct: 143 LLRVLVLNTMRRTTSLLDVETSTGGDNKDCIFLEHYLNLHYRENITLDHLASLTFLNKFY 202 Query: 206 LTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTS 265 L+ + G +P+ + R+ AKK L T+ S+T I+ G+ SPS F + FK + Sbjct: 203 LSHIFKEQTGLSPIDYLLRKRMIEAKKLLINTDLSITQISDIVGFRSPSYFSQFFKNMEC 262 Query: 266 FTPKSYRKKLT 276 +P S+R K Sbjct: 263 MSPSSFRNKHK 273 >UniRef50_A5ZP25 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZP25_9FIRM Length = 300 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 45/287 (15%), Positives = 90/287 (31%), Gaps = 20/287 (6%) Query: 7 NAPEIATAREQQLFNGKNFHVFIYNKTE-----SISGLHQHDYYEFTLVLTGRYFQEING 61 A E + Y + H H EF + +G +I Sbjct: 9 KTTTDANLMETVHHGSAEYPFRYYYENIALFDFKCIDWHWHSELEFIYIESGNVVFDIGT 68 Query: 62 KRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFE-------QHYLPLLPYCFV 114 L G+ + I H+ I N F + Y+ + + Sbjct: 69 VHFELNEGNGIMINSKILHRLQSSS-DAIIPNFLFQPSFIAPQDSLIYKKYINPVISSSL 127 Query: 115 ASQVYRTNNAFLTYVETVISSL-------NLRETGLEEFVEMVTFYVINRLRHYREEQVI 167 V++ + + +I ++ RE + V+ + ++ L + E + Sbjct: 128 EYLVFQPDIPWQKKALEIIKTIIAVQETEFNREIIVSMSVQQLWILLLENLTFDQFENMG 187 Query: 168 DDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRI 227 + + + + LE++ + S+ Q TP++ + R+ Sbjct: 188 AVISRTRLQLMMQYVHAHYSENITLEDIARTANISKSTALHLFQNNLKLTPVKYLINYRL 247 Query: 228 NFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 A L T + I+ G+++ F +TFKK TP YR + Sbjct: 248 TQAALLLINTEEKIATISNNTGFNNVDHFCRTFKKTYKMTPTDYRNQ 294 >UniRef50_C6CWW3 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CWW3_PAESJ Length = 293 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 47/283 (16%), Positives = 108/283 (38%), Gaps = 19/283 (6%) Query: 16 EQQLFNGKNFHVFIY---NKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFV 72 E+ ++ + ++ K + + H H E ++ GR ++ + LE GD + Sbjct: 11 EKVVYENPLLSLRVWQPIRKDDDFTNWHYHRQLELLYIIKGRLDVDVEEESYHLEPGDII 70 Query: 73 FIPLGSHHQSFYEFGATRILNVGISKR------------FFEQHYLPLLPYCFVASQVYR 120 I H+ G + + +F + PL ++ + + Sbjct: 71 MIGASQLHRDKSV-GHLDYIVLQFELEPFFDQSTIAYMRYFSETENPLSMANYIFQENGK 129 Query: 121 TNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQ---VIDDVPQWLKST 177 Y+ + +ETG E V ++ ++ L + DD + Sbjct: 130 VKKQIGDYIRQLHHEAERKETGYEIAVSVLIKQILLTLLRNDNRKMLAEQDDFDRLRLKP 189 Query: 178 VEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMT 237 V + +E + ++ S Y + ++ G + + +N +I +A++ L Sbjct: 190 VLDYVENRLTDRIQVEEVCRIANMSYYYFVKFFKKTIGMSFTEFVNYRKIKWAERILLTK 249 Query: 238 NYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 + S+T++ G + + F K FKK +PK +++K+ ++N+ Sbjct: 250 DLSITEVGERIGMPNMAHFYKMFKKYNDCSPKQFQRKMLDWNR 292 >UniRef50_UPI0001969E72 hypothetical protein BACCELL_04741 n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=UPI0001969E72 Length = 291 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 50/272 (18%), Positives = 100/272 (36%), Gaps = 18/272 (6%) Query: 16 EQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIP 75 E++ F +N H+ + GLHQ +E + V+ G + I G+ V IP Sbjct: 5 ERRSFTFENVHLA----PDEQIGLHQQSTWELSYVIVGSGMRLIGDMTEPFLGGEVVMIP 60 Query: 76 LGSHHQSFYEFGATRI------LNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFL--- 126 H ++E T + V F ++ C ++ + +A Sbjct: 61 PEIPHCWYFEDDDTDEQGRIANITVTFDNDFLDRCSGTFPELCGHIDKLKKKYDAVKFDK 120 Query: 127 TYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVID-----DVPQWLKSTVEKM 181 E +I L E +I + E V+ D + ++ Sbjct: 121 EKSEAIIDLLEEMCNQSEAERVASMIKLILIMADSGSEHVVGKYQRIDKETKRMNQIQTY 180 Query: 182 HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSV 241 + L+++ ++ ++ GKT + +NE RI A + L+ +V Sbjct: 181 VICNAKRDITLDDVARYVGMNRASFCIFFKKATGKTFVTYLNEYRIGLACQLLKQKRMTV 240 Query: 242 TDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 ++I + G+++ F +TFK+ +P Y++ Sbjct: 241 SEICYNVGFNNVPYFNRTFKRHKGVSPCEYKQ 272 >UniRef50_C0EGE3 Putative uncharacterized protein n=2 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGE3_9CLOT Length = 371 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 42/255 (16%), Positives = 98/255 (38%), Gaps = 19/255 (7%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISK 98 LH H+++E V +G + +G+ L +G H + ++N+ + K Sbjct: 108 LHTHEFFELIYVYSGTCYCNFSGEEFCLSKGTIWIFNTQCAHSVVIPDDGSTLVNILLRK 167 Query: 99 RFFEQHYLPLLPYC-----FVASQVYRTN-------------NAFLTYVETVISSLNLRE 140 F L ++ F +Y N + Y+ +I + Sbjct: 168 STFSSAILNMIQDNDLFLDFFLKSIYDANTQPHHMQFQAQPGSEIEFYIFKIILEYANQS 227 Query: 141 TGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM-HDKEQFSESALENMVALS 199 + ++++ ++ L + + + + + + + +++ L++ Sbjct: 228 NYRQSIMKLMLSTLLTELARDYQLRSETEDKTASIDILNIIAYISDHYTDVTLKSTAEHF 287 Query: 200 AKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKT 259 S +Y+++ +Y G + ++ + +++ A+ L T + +A GYS S F + Sbjct: 288 HYSPDYISKCIYKYTGYSFLEYMKRYKLSKAEYLLLHTKLPLEQVASMVGYSQRSSFDRE 347 Query: 260 FKKLTSFTPKSYRKK 274 FKK S TP YR + Sbjct: 348 FKKHYSLTPSRYRSQ 362 >UniRef50_A6BIB0 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BIB0_9FIRM Length = 285 Score = 190 bits (483), Expect = 5e-47, Method: Composition-based stats. Identities = 45/254 (17%), Positives = 95/254 (37%), Gaps = 12/254 (4%) Query: 36 ISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVG 95 H H+ E L G I + + L+R + H + L + Sbjct: 28 HIPAHWHEAMEILFCLNGSVRIHIEHEHLTLQRNQLIVFDSKEVHSIHSDSKLYMFLCIH 87 Query: 96 ISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVT---- 151 + K+ + L Y V ++ Y+ + +L T +E Sbjct: 88 VDKKQLSVYCPDLELYHIKCRPVSLDDSKSTPYIHLCQLAHDLTRTNVENKNTSAMRSDG 147 Query: 152 --FYVINRLRHYRE------EQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQ 203 ++ L Y + + ++ + +LE + S+ Sbjct: 148 TALLMLADLIRYFSVYSLPGTTTGTGQSNDILRKIISYVNEHYTEKLSLEEVANQVGFSR 207 Query: 204 EYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKL 263 EY R +++ G T ++ +NE+RI+ A + L T+ S++++ E+G+++ ++F + FK++ Sbjct: 208 EYFCRFFKQHMGITFLRYLNEVRISHAGRILMNTDKSISEVMQESGFTNQTIFNRLFKEI 267 Query: 264 TSFTPKSYRKKLTE 277 TP+ R E Sbjct: 268 YGMTPRQARNSYAE 281 >UniRef50_C6D477 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D477_PAESJ Length = 305 Score = 190 bits (483), Expect = 6e-47, Method: Composition-based stats. Identities = 57/288 (19%), Positives = 102/288 (35%), Gaps = 24/288 (8%) Query: 7 NAPEIATAREQQLFNGKNFHVFIYNKTESIS-GLHQHDYYEFTLVLTGRYFQEINGKRVL 65 AP ++ E+ N F VFI E H H Y E V++G + + + Sbjct: 11 KAPAHHSSIEEHFHNQ--FPVFINRWEEGFDLREHDHAYLEIVYVMSGEGYHYVADEVNK 68 Query: 66 LERGDFVFIPLGSHHQSFYEFGATR--ILNVGISKRFFEQHYLPLLPYCFVASQVYRTNN 123 +G IP+G+ H A R + N+ I + + + L YC ++ + Sbjct: 69 TSKGSLYIIPIGTSHIFRPNGTANRLLVYNLCIRPDWIGELGVWLSQYCRDTDVLHVLDG 128 Query: 124 -------------AFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVID-- 168 E + G E V ++ R+ + Q Sbjct: 129 NPGTYLFLRDTPLELAPSFEQLHREFTEESWGFETTVLAGLLQLLTRISRKLKTQDSTGD 188 Query: 169 ----DVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINE 224 ++ + ++ +E + + SQ + R ++ G + + Sbjct: 189 QTTGSTRHSEFVSIVEHINRHIAEPLKMEQLADQAGISQRHFIRLFRQQTGMGFSEYVQN 248 Query: 225 IRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 R+ A + L T+ SV DIA + GY P+ F + F+K+ TP YR Sbjct: 249 KRVELACQLLTGTSQSVADIAKKVGYQDPAHFREVFRKVMGITPSQYR 296 >UniRef50_A5ZUG1 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZUG1_9FIRM Length = 277 Score = 190 bits (483), Expect = 6e-47, Method: Composition-based stats. Identities = 58/255 (22%), Positives = 104/255 (40%), Gaps = 10/255 (3%) Query: 30 YNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEF-GA 88 + + + S H H + E V G I + +++ D + + H Sbjct: 27 HYEEDWPSIPHTHAFTELFYVSEGSGEFLIENQHFSIKKDDLIIVNPHIQHTEISLSASP 86 Query: 89 TRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVE 148 VG+ F H F ++ + L Y ++ L+ + G EE + Sbjct: 87 LSYYTVGVDGISFSFH----DQKEFQIFHYHQKHADLLFYFHSLFQELDEKNDGYEEICK 142 Query: 149 MVTFYVINRLRHYR---EEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEY 205 +I++LR + + P + V++ D + LE + +LS ++ Y Sbjct: 143 HTLAILISQLRRFAVSDFQLFPSFHPSKECALVKRYLDSHYSDDINLEQLASLSHLNKYY 202 Query: 206 LTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTS 265 L+ RYYG +P+ + RI K LE T++ ++DIA AG+SS S ++F+K Sbjct: 203 LSHEFTRYYGISPISYLTHRRIEVCKNLLENTDHEISDIAHLAGFSSQSYLAQSFRKYCG 262 Query: 266 FTPKSYRKKLTEFNQ 280 T YR+ + NQ Sbjct: 263 MTAGEYRRS--KKNQ 275 >UniRef50_A4ATK5 Transcriptional regulator n=1 Tax=Flavobacteriales bacterium HTCC2170 RepID=A4ATK5_9FLAO Length = 288 Score = 189 bits (482), Expect = 6e-47, Method: Composition-based stats. Identities = 56/287 (19%), Positives = 105/287 (36%), Gaps = 18/287 (6%) Query: 10 EIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 R+ + K+F + H H+ Y+ +VL G + + E G Sbjct: 1 MKQAIRKLPISKSKSFAIHELIAPHFDPHWHFHNEYQLVIVLEGTGTRFVGDDISHFEAG 60 Query: 70 DFVFIPLGSHH-------QSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTN 122 D V H T + + S F E +L + + R++ Sbjct: 61 DMVLTGSNLPHVWRNDETYFQGLSLVTHCIVIYFSLDFMEGEFLNKEEMKGIRELLDRSH 120 Query: 123 N------AFLTYVETVISSLNLRE--TGLEEFVEMVTFYVINRLRHYREE---QVIDDVP 171 V+ ++ + + G+ ++++ +L+ +E + D Sbjct: 121 RGLEISGEIRDTVKKIMCDMLRLKGFDGVLSLLQILNILSSQKLKFINKEGYLNTVTDSD 180 Query: 172 QWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAK 231 T+ + LE + +L+ S +R + + KT + E+RI A Sbjct: 181 SKRMRTIHSYILDNFKGDIRLEEVASLANLSPTSFSRYFKSHTNKTFSNFVAELRIGAAC 240 Query: 232 KQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEF 278 K L + S+ IA E GY++ S F K FK+LT+ +P YRK+ + Sbjct: 241 KLLHSNDLSILGIAHECGYNTLSNFNKKFKELTNDSPLRYRKRYQKI 287 >UniRef50_C0D5Z0 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D5Z0_9CLOT Length = 334 Score = 189 bits (482), Expect = 7e-47, Method: Composition-based stats. Identities = 52/269 (19%), Positives = 99/269 (36%), Gaps = 11/269 (4%) Query: 23 KNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQS 82 N + Y + H E LVL G+ L+ D + I H S Sbjct: 29 GNILLESYAYEVGFFRFNWHPSLEIMLVLEGKLTAYSEQGVFELQEDDLLVINPNIGHAS 88 Query: 83 FYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVET----VISSLNL 138 + T L + IS+ + EQ + +FL + + ++L+ Sbjct: 89 MLQSPRTVALVIHISQSYLEQLCGNAAIPNLTCYSASEADRSFLKPLRAGIAAIYTTLSE 148 Query: 139 RETGLEEFVEMVTFYVINRLRHYR-------EEQVIDDVPQWLKSTVEKMHDKEQFSESA 191 + F + + +++ L Y +EQ Q L T+ K + + Sbjct: 149 KSQTGRLFTQSQIYALLSFLLRYNADNDLRPKEQRQKAEQQKLIHTMIKYINHHFRDKVT 208 Query: 192 LENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYS 251 L + LS + Y++ + + G + R+ +A Q+ T S+ DIA ++G+ Sbjct: 209 LSQLAELSGMNLCYVSTFFKAHTGVGFQDYLTRKRLAYAAYQINNTEDSIVDIAMDSGFP 268 Query: 252 SPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 F + F+K + +P YR +L++ Sbjct: 269 DVKAFNQAFRKYFNLSPGQYRSELSKKED 297 >UniRef50_UPI0001BC838F helix-turn-helix- domain containing protein AraC type n=1 Tax=Bacteroides sp. D2 RepID=UPI0001BC838F Length = 289 Score = 189 bits (481), Expect = 8e-47, Method: Composition-based stats. Identities = 51/273 (18%), Positives = 103/273 (37%), Gaps = 16/273 (5%) Query: 16 EQQLFNGKNFHVFIYN-KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFI 74 E ++ V + N K + +H H YE LV+ + I E D V + Sbjct: 7 EVTPLTDEDLFVLLNNPKAKFDYPIHFHSDYELNLVMNTSGKRIIGDSIEDFENCDLVLL 66 Query: 75 PLGSHHQSFYEF-GATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNA-------FL 126 G H+ T+++ + ++ + L + + + R+ F Sbjct: 67 GPGLPHKWKAPTLDETQVITIQFHEQMYNSFLLNKRVFEPIRELLIRSTRGIVYTGKTFE 126 Query: 127 TYVETVISSLNLRETGLEEFVEMVTFYV-------INRLRHYREEQVIDDVPQWLKSTVE 179 E +++ N R + + + + Y ++ + + Sbjct: 127 RVKERLLNLSNARGFNTALEFYSILYDLSIADEQRLLTSASYDSSLLVRESRSRRIEKIC 186 Query: 180 KMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNY 239 K + + L+ + L S+ ++ ++ ++ + + ++RI +A + L T Sbjct: 187 KYIEVNFKKDITLKEIAELVNMSESAISHFFKKRTNRSFITYLTDVRIGYASRLLAETTQ 246 Query: 240 SVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 SV DIAFE G+S+ S F + FKK + TP YR Sbjct: 247 SVADIAFECGFSNLSNFNRIFKKYKNQTPTDYR 279 >UniRef50_C0EH74 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EH74_9CLOT Length = 302 Score = 189 bits (481), Expect = 8e-47, Method: Composition-based stats. Identities = 43/276 (15%), Positives = 92/276 (33%), Gaps = 11/276 (3%) Query: 11 IATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 + E++ ++ N V+ S H H E + G IN + GD Sbjct: 1 MEAFYEKRRYDT-NLRVWTCCYNGLTSLPHYHREIELLYIRQGCAHVGINSQSYTCYGGD 59 Query: 71 FVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVE 130 V G H S E + + E Y V + V+ Sbjct: 60 LVISQTGDMHYSNSENEDNILDFIVFEPSVLETVYSNDRSLQSVLTAKELKKTGMDEIVQ 119 Query: 131 TVIS----SLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWL------KSTVEK 180 + S L +E + +++ + Y + + Q + + Sbjct: 120 RMYSTVHSELKNQEMDFDTLIKLTLSEFWVKYTRYFGQTRTAEDRQPMVTALAKLQKLMD 179 Query: 181 MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYS 240 + ++ +L + + + ++ ++ G + +N +++ A + + + YS Sbjct: 180 YIEDNFANDISLSDAAEIMGYEVCHCSKVFKKLTGVNFTEYLNNVKVGKAIEMIRKSEYS 239 Query: 241 VTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 +TDIA G+++ F + FK +T TP + Sbjct: 240 ITDIAMRCGFNNIRTFNRVFKSITKMTPTHFMNTNR 275 >UniRef50_C4ZHR1 Xylan 1,4-beta-xylosidase n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZHR1_EUBR3 Length = 276 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 48/257 (18%), Positives = 97/257 (37%), Gaps = 9/257 (3%) Query: 25 FHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFY 84 + Y S H HD+ E V++G L+ +F I H + Sbjct: 17 IYCDRYEDYRQFSPRHWHDHIEIIYVVSGSLQVVCGENEYTLKENEFFVINSNKIHGTQS 76 Query: 85 EFGATRILNVGISKRFFEQHYLPL----LPYCFVASQVYRTNNAFLTYVETVISSLNLRE 140 + R+L V I + + + C+ R + ++++ + Sbjct: 77 -YERVRVLLVQIPYAYLDSYIDDYGQIRFRECYETENGSRKYEQMKSLLKSIAHIYRKKG 135 Query: 141 TGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLK----STVEKMHDKEQFSESALENMV 196 G E + + L + ++ + + V + K AL+ Sbjct: 136 KGYELRLMAKVNEFLYILFTNYSYKEMNAGKESRQIARLKDVLRYVAKNYQEPIALKEAA 195 Query: 197 ALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLF 256 +++ +Q+Y R ++ G T ++ +N++RIN ++L T S+TDI G+++ +F Sbjct: 196 DIASLNQDYFCRMFKKCMGVTFLEYVNQVRINHIHEELLATEDSITDILEHNGFTNYKVF 255 Query: 257 IKTFKKLTSFTPKSYRK 273 + FK TP+ RK Sbjct: 256 SRMFKAQFGMTPRELRK 272 >UniRef50_A4BH94 Transcriptional regulator, AraC/XylS family protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BH94_9GAMM Length = 305 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 44/245 (17%), Positives = 86/245 (35%), Gaps = 10/245 (4%) Query: 39 LHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGIS- 97 LH+H E VL G ++N + L GD +FI HH + +L + Sbjct: 27 LHRHQATEALWVLQGAIRVQVNDHQYSLRDGDLLFINADDHHATEAASDDNLVLCLQHRF 86 Query: 98 KRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINR 157 + P + +++ N T + + + + E + Sbjct: 87 EELVNVSVAPGTSNPVLKARL----NDLRTTLAHLWWEQKYQPAHWQLATENGLAQLQLI 142 Query: 158 LRHYREEQV-----IDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQR 212 L Y D W + + + +L ++ S+ YL+ + Sbjct: 143 LLRYFSSASPAPAESRDDASWRIQQITRYLEAHYREPISLTSLSEHFGLSETYLSHYFKD 202 Query: 213 YYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 G T ++ + ++R+ L T+ +V ++A E G+ S F FK+ TP +R Sbjct: 203 KTGSTLVRWLTQLRLERCLPDLIQTDSTVAELALEHGFPSIKAFNSAFKREYQCTPSEFR 262 Query: 273 KKLTE 277 ++ Sbjct: 263 QQQQS 267 >UniRef50_C0EIK7 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIK7_9CLOT Length = 343 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 42/274 (15%), Positives = 99/274 (36%), Gaps = 21/274 (7%) Query: 25 FHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFY 84 H + Y S H HD++E + V G+++ + + + + V + + H + Sbjct: 62 LHDYRYVHFGPPSHPHNHDFFEMSYVYKGQFYNRVENQDIEQKENTLVLLSPRAVHSCYI 121 Query: 85 EFGATRILNVGISKRFFEQHYLPLLP-----YCFVASQVYRTN-----------NAFLTY 128 + N+ I + E+ +L + F +Y + ++ Sbjct: 122 REKTDIVFNILIKRSLVEKIFLRMFSEESAVSRFFLDSIYNIHQKKPYLVFHCNEELVSL 181 Query: 129 VETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVP----QWLKSTVEKMHDK 184 V +I ++ + + + + L + + + P S + + Sbjct: 182 VHGIIREHFDQKLFSQNMIIAKLIELFSELSRLFQITLQGESPLPETSSNISEILDYIEN 241 Query: 185 EQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDI 244 S L ++ S Y++R + + ++ I++ ++ A + L ++ V + Sbjct: 242 NYSS-VTLTSVAEHFNYSPSYVSRIIKTHLNQSFASIVHNKKLENACRYLSASDLPVEQV 300 Query: 245 AFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEF 278 GYS S F K FK+ +P+ YR + + Sbjct: 301 IEIVGYSDVSHFYKIFKQKYGLSPRQYRTQSNKL 334 >UniRef50_C0EGG6 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGG6_9CLOT Length = 334 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 57/287 (19%), Positives = 108/287 (37%), Gaps = 25/287 (8%) Query: 16 EQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIP 75 E H+ ++ + H HD++E V G Q K + D + + Sbjct: 47 ENNSIKVMLHHLACFSDEDF---FHCHDFFEMIYVYRGNCLQRFPDKEFTMREHDLLLLN 103 Query: 76 LGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVY---------------- 119 + H + + N+ ISK FE+ L L+ + S+ Sbjct: 104 PYTIHAPYTIKNEDSVFNILISKTLFERSLLSLISDNRIFSEFIINCLYQSSKSNDYLYF 163 Query: 120 --RTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDD--VPQWLK 175 N L VE++I +E ++ +E + +L ++ + Q Sbjct: 164 PANENEPVLDLVESIIIEYLEKELSYQKVMEASLVLLFAKLSRIYHKRFSSEVLENQKNT 223 Query: 176 STVEKM--HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQ 233 T+ + + E +LE++ S +L+R ++ GK QI+ + +I A+ Sbjct: 224 QTIVSILAYINENAPNVSLESISERFNYSTGHLSRMIHQFTGKPYSQIVQKFKIERARSY 283 Query: 234 LEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 LE + ++ +I +G+ S + F + FKK TP YR N+ Sbjct: 284 LENSELTIPEIMELSGFHSANYFYRMFKKFYLMTPNEYRSNYAAANK 330 >UniRef50_C4GA22 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GA22_9FIRM Length = 279 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 51/264 (19%), Positives = 109/264 (41%), Gaps = 7/264 (2%) Query: 19 LFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGS 78 + G + +E++ H H YYE + G ++ + E G+ + P S Sbjct: 9 IEQGADIAAERVRSSENMMKSHYHTYYELYYLEEGCRLHAVSDQIYRTEAGEMILFPPYS 68 Query: 79 HHQSFYEFGA--TRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSL 136 H S+ + + V +++ L L+ A +Y + + ++ + Sbjct: 69 MHHSYAPSEDQAFQRIVVYFTEKAIGD--LTLIEKMRHAGGLYHPDRRMSHQIHGLLGMM 126 Query: 137 NLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEK---MHDKEQFSESALE 193 + ++ ++ ++ ++ + + V P KS V K + L+ Sbjct: 127 LMEQSETDDLHDITMETILRAILLLLLKDVRTLNPTVNKSRVIKVIEYISDHYMEDLRLD 186 Query: 194 NMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSP 253 + SQ YL R ++Y +T Q IN RI A++++ TN+ + +A G++S Sbjct: 187 ELAGRFYVSQYYLCREFKKYTSRTINQYINTTRILNAQREIMETNHPFSQVAANCGFASS 246 Query: 254 SLFIKTFKKLTSFTPKSYRKKLTE 277 + F + F+ +T TP ++RK ++ Sbjct: 247 THFSRVFRSVTGMTPTAFRKSCSQ 270 >UniRef50_C9LQ90 Putative transcriptional regulator n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQ90_9FIRM Length = 295 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 49/254 (19%), Positives = 94/254 (37%), Gaps = 17/254 (6%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEF-GATRILNVGISK 98 H HD EF +L G+ I K + RGDF+ I + +S R + I Sbjct: 42 HWHDELEFIYILDGKMDFHIEEKILTASRGDFLAIHASAMRRSAPHNGEDCRFIRALIHP 101 Query: 99 RFFEQH-------YLPLLPY----CFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFV 147 ++ PLL CF+ + + G E Sbjct: 102 SLLTENQSVRNRLLSPLLGNTSRRCFLVPSASPDAPRRGELLREINRINEKHLPGFELES 161 Query: 148 EMVTFYVINRLR-----HYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKS 202 + ++ RL + ++ + + + + +L + A + S Sbjct: 162 IGLLHILLARLYALFPPEKQTQEDMPGTDISAQRRMVAYISHHYPEKISLAGIAAAGSVS 221 Query: 203 QEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKK 262 + + ++Y ++P+ +N R+ ++ L+ T S+ +IA G+SS S + K F + Sbjct: 222 RSKCCQLFKKYMQQSPIDFLNRYRLEISRNLLDSTENSILEIANACGFSSQSYYTKMFSE 281 Query: 263 LTSFTPKSYRKKLT 276 + TP YR +L+ Sbjct: 282 KFNCTPTQYRSRLS 295 >UniRef50_C6PBN1 Transcriptional regulator, AraC family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PBN1_CLOTS Length = 295 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 58/284 (20%), Positives = 115/284 (40%), Gaps = 20/284 (7%) Query: 13 TAREQQLFNGKNFHV---FIYNKTESISGLHQHDYYEFTLVLTGRYF-QEINGKRVLLER 68 + + + N N + F + + H H+ E + VL+G+ I+G E+ Sbjct: 2 EYKYELIKNDDNLPIKIIFHTSDDAQLVPRHWHESIEISYVLSGKIDDIYIDGIHYTSEQ 61 Query: 69 GDFVFIPLGSHHQSFYEFGATR-ILNVGISKRFFEQHYLPLLPYCFVASQVYRTN----- 122 GD V I + H G R + IS F + +Y + F + + + Sbjct: 62 GDIVLINSNAIHSFSVVQGKNRKAVTFFISYEFLKTNYPDIDQIAFDCVSIDQNDEHKIK 121 Query: 123 --NAFLTYVETVISSLNLRETGLEEFVE--MVTFYVINRLRHYRE------EQVIDDVPQ 172 N ++++I + + ++ +++ +I L + ++ Sbjct: 122 IFNELRENLDSIIRAFSNLRDDSLAHIKVIGLSYELIYLLLKNFKISKKSFGEIKTKKYL 181 Query: 173 WLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKK 232 + + + + +++ + A S EYL+R ++Y G T IN +R+ + + Sbjct: 182 DRLTEITNYIKENYSQDLSIDIISAKFNLSPEYLSRFFKKYMGMTIHNYINTVRLEKSYR 241 Query: 233 QLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 L T+ S+T+IA E G+ + F K FK + TP YRKK+ Sbjct: 242 DLMNTDQSITEIALEHGFPNEKSFNKVFKTFYNITPNQYRKKIK 285 >UniRef50_A7B0Y7 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0Y7_RUMGN Length = 276 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 52/254 (20%), Positives = 108/254 (42%), Gaps = 7/254 (2%) Query: 28 FIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQS-FYEF 86 F ++ + S +H H + E V++G N ++ L RGD V IP + H + Sbjct: 25 FSKDEGDWKSIMHTHHFTELLFVVSGEGSFSFNQEQSPLRRGDLVIIPPYTEHTERSSQN 84 Query: 87 GATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEF 146 +GI F F + + + ++ + + G + Sbjct: 85 HPLEYYVLGIDGISFLSQKDRECAQVFCN---FEHDPSIHELFRQMLYEIRTAQYGSQTI 141 Query: 147 VEMVTFYVINRLRHYREEQVIDDVPQWLKS---TVEKMHDKEQFSESALENMVALSAKSQ 203 + + +I ++ ++ + + +++ D L+ + L+ ++ Sbjct: 142 CQHLLEILILKIIRSQQLIPVSINSIRMTKECAQIKEYLDSNYAEHITLDTLTGLTHMNK 201 Query: 204 EYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKL 263 Y+ + +Y G +P+Q +N+ R+ A+ L+ TNYS++DIA G+SS S F + F+K Sbjct: 202 YYMVHSFTKYAGLSPIQYLNQTRLKRAQHLLKNTNYSISDIASSTGFSSQSYFTQIFRKN 261 Query: 264 TSFTPKSYRKKLTE 277 + TP YR++ + Sbjct: 262 FNMTPVKYRQEHAK 275 >UniRef50_B7CB27 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CB27_9FIRM Length = 291 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 52/244 (21%), Positives = 100/244 (40%), Gaps = 5/244 (2%) Query: 34 ESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG-ATRIL 92 E S LH H Y E V G ++ K ++ D V + H + Sbjct: 44 EWNSTLHTHLYTEIFYVTKGHGLLSLDNKNYPVKEDDLVIVNPLISHTERGIENVNFEYI 103 Query: 93 NVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTF 152 +GI + C +A+ Y + L Y++T++ + ++T + + + Sbjct: 104 VMGIEGVTYFSKEEDEEQGCSIANY-YEYKHEVLFYLKTILFEVKTKDTEYQSLCQNLLE 162 Query: 153 YVINRLRHYREEQVIDDVPQWLKST---VEKMHDKEQFSESALENMVALSAKSQEYLTRA 209 ++ L + +EK D + L+ + L+ ++ ++ A Sbjct: 163 VLLINLMRRANINLKSSPINKANKDCVLIEKYIDAHFKEDITLDTLSELTFLNKYHIVHA 222 Query: 210 TQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPK 269 ++Y G +P+ + + R+ AK L TN +++IA+ G++S S F + FKK T +P Sbjct: 223 FKQYKGISPINYMIQKRLEEAKLLLSTTNLQISEIAYIVGFTSQSYFAQAFKKATLTSPL 282 Query: 270 SYRK 273 YRK Sbjct: 283 QYRK 286 >UniRef50_A9KIW0 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KIW0_CLOPH Length = 300 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 39/248 (15%), Positives = 94/248 (37%), Gaps = 9/248 (3%) Query: 33 TESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYE-FGATRI 91 T+ S H H++ EF + G + + + ++ D + + H Sbjct: 54 TDWKSLPHSHNFAEFFYITNGSGQFSVEKEILDVKANDLIILNPTIVHTEISNPSKPMEY 113 Query: 92 LNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVT 151 + +GI F+ ++ + Y ++ + + + + Sbjct: 114 IVLGIEGIKFQAE-----DQGYILLNSSAHKSDLHLYFNSLAHEMKSEQPYRNFVCQNLL 168 Query: 152 FYVINRLRHYREEQVI---DDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTR 208 + + ++ + +K ++ +E + +L ++ Y Sbjct: 169 NIIFTMILRNDAFKISIVSGPKLTRECNIAKKYIEENYQENITIETLSSLVHLNKYYFVH 228 Query: 209 ATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTP 268 ++ +G +P+ + + RI + L TN+S++ I+ G+SSPS F + FK++T+ TP Sbjct: 229 NFKKQFGTSPINYLIKRRIEESMHLLVSTNHSLSSISQIVGFSSPSYFSQAFKRMTNITP 288 Query: 269 KSYRKKLT 276 + Y+K Sbjct: 289 QEYKKMYK 296 >UniRef50_B7C800 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C800_9FIRM Length = 295 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 48/285 (16%), Positives = 95/285 (33%), Gaps = 22/285 (7%) Query: 10 EIATAREQQLFNGKNFHVFI--------YNKTESISGLHQHDYYEFTLVLTGRYFQEING 61 + + F V I LH H+ +F L G ++NG Sbjct: 1 MENKLHILNGYTDELFPVNICVVRKYSDLPIGSGFKSLHWHEDLQFVLCTKGYVNYQVNG 60 Query: 62 KRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFF---------EQHYLPLLPYC 112 L+ + +FI G+ H S + + + ++ P Sbjct: 61 IEYKLKEKEALFINKGALHMSNDMSEDGEYVTLTFPEELLFFFKESRMKYKYVWPYTRMD 120 Query: 113 FVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREE-----QVI 167 F+ + N ++Y+ + + E V ++ + L + Sbjct: 121 FLRCYEIKEENEIISYLYDIYNIYLNGSDMFEYDVSILITMIWRDLVKSLSKIDFIPNKK 180 Query: 168 DDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRI 227 D Q + E +L+++ S R + TP + + + R+ Sbjct: 181 DVERQERVQVMLVYIHTHYADELSLKDIADAGMMSIAQCNRCFNKMLNVTPYEYLIQYRL 240 Query: 228 NFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 A L+ +VT+I+ G+++ + FI+ FKK+ +PK YR Sbjct: 241 QKATNLLKDATLNVTEISEIVGFNNVTHFIQAFKKVYGISPKKYR 285 >UniRef50_C2LSM7 Transcriptional regulator n=5 Tax=Streptococcus RepID=C2LSM7_STRSL Length = 313 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 45/268 (16%), Positives = 86/268 (32%), Gaps = 18/268 (6%) Query: 31 NKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFY-EFGAT 89 H H E V G I+ + GD I H + Sbjct: 42 ENGRPDILFHWHPELEIQYVYGGTARYHIDYDYFDSQAGDIFLIRPNGLHSIHPVDNQPH 101 Query: 90 RILNVGISKRFFEQ---------HYLPLLPYCFVASQVYRTNNA----FLTYVETVISSL 136 + Q + PL F Q R ++ + + + Sbjct: 102 HTDTLHFHLDMLGQSLVDPLSLRYLQPLQNSNFKFKQCLRPSDEGYTEIKDLLFKIFKMI 161 Query: 137 NLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKST----VEKMHDKEQFSESAL 192 +E E ++ +I L YR + + K+ + ++ + Sbjct: 162 RQKERHYELLLKSKLEELIYLLYFYRLVERKTSDDHYRKNEKIREIIDYINQHYAENLTI 221 Query: 193 ENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSS 252 E + L S+ + +++ G + + I + R+N A ++L + V +IA G+++ Sbjct: 222 EKLSELMGYSKTHFMTIFKQHTGTSCTEFIIQARLNAACEELRNSVKPVLEIATTVGFNN 281 Query: 253 PSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 S F + FK TP YRK + + Sbjct: 282 LSNFNRQFKHYYDQTPSQYRKTHSNKKK 309 >UniRef50_C6LL88 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LL88_9FIRM Length = 303 Score = 187 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 56/285 (19%), Positives = 102/285 (35%), Gaps = 27/285 (9%) Query: 10 EIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 T + + + FH Y H H E + +T Y ++ K+ +L+ G Sbjct: 8 MTETINYRNSMDFRLFHNVDYED----YPTHWHVGIEILMPVTEIYGVIVDQKKYVLQEG 63 Query: 70 DFVFIPLGSHHQSFYEFGATRILNVGISKRFF-----EQHYLPLLPYCFVASQVYRTN-- 122 D + + G H RI+ + + L L P F + + Sbjct: 64 DILIVNSGVPHALEAPPTGERII-LQFDPALLYSLKEMETLLLLFPPVFYITPENEPDLY 122 Query: 123 NAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVID-----------DVP 171 +E +I + ++ V + + E+ I+ Sbjct: 123 PLVKAKMEEIIREYDGQQAFAGALVYASLIELFAGVGRITRERNIEGTALHDMRRSKQDR 182 Query: 172 QWLKSTVE----KMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRI 227 QW V ++ + LE + S+ + TR ++Y T + +N+ R+ Sbjct: 183 QWEYQEVALKACNYINQHYQEKLTLEETAKMVGFSKYHFTRVFKKYMNMTFYEYLNKKRV 242 Query: 228 NFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 A+ L T S+TD+A +G+SS S F +TFK L +P +R Sbjct: 243 KCAEGLLYSTEMSITDVAMNSGFSSMSSFDRTFKALNKCSPSEFR 287 >UniRef50_B7AP83 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AP83_9BACE Length = 278 Score = 187 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 44/269 (16%), Positives = 92/269 (34%), Gaps = 16/269 (5%) Query: 22 GKNFHVF--IYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSH 79 + F++ I + H HD YE + +G ++ + G V IP G Sbjct: 6 SEYFNINKLIREAAFRMDETHSHDCYELVYLFSGECNILVSHTIYRMVPGTLVIIPPGEI 65 Query: 80 HQSFYEFGATRI-----LNVGISK-----RFFEQHYLPLLPYCFVASQVYRTNNAFLTYV 129 H++ Y L I + ++ + + + Sbjct: 66 HKTSYGSNDKVRQQRTALRFSIKDTDWLCSALGKDFVKDNLTAGIIEVPDKRKEYIENLI 125 Query: 130 ETVISSLNLRETGLEEFVEMVTFYVINRLRHYR----EEQVIDDVPQWLKSTVEKMHDKE 185 +I + + V+ + + + + D V Sbjct: 126 TRMIYENQMPDELSMGMVKTLFQEFMIFVLRCKLYGDTSAHEIDAQNSTIQDVATYVYNN 185 Query: 186 QFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIA 245 + L+++ + S+ YL++ ++ G + + +RI A + L TN+S+TDIA Sbjct: 186 YDKQIYLDDVAKQFSISRSYLSKKFKQTTGFGFKEYLLNVRIKEACRLLLETNHSITDIA 245 Query: 246 FEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 F G++ + F F+++ +P YR Sbjct: 246 FACGFNDSNYFGDAFRRIKGISPNKYRHN 274 >UniRef50_C6D019 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D019_PAESJ Length = 289 Score = 187 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 53/283 (18%), Positives = 101/283 (35%), Gaps = 20/283 (7%) Query: 16 EQQLFNGKNFHVFIYNKTESISGL---HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFV 72 E + ++ YNK + + H H YE + +G I ++ + GD V Sbjct: 6 ELFYGDSEDLFFLEYNKRKGHFTMSVEHIHGQYELYYLFSGERQYFIKDRKYPIAAGDLV 65 Query: 73 FIPLGSHHQSFYEFGATR-ILNVGISKRFFEQH--------YLPLLPYCFVASQVYRTNN 123 IP H++ + + ++++FEQ+ P L V ++ Sbjct: 66 LIPANELHKTSDTGVPNHARIVLYYNEKYFEQYGKEESELLLSPFLGSRRVFRLAHQERL 125 Query: 124 AFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWL--------K 175 F + ++ + R G E + + + D + Sbjct: 126 RFEQLLYGLLQEVQERPPGHEMPIRHAVAEALLFAARHAIHNKPDPSDGSVPPSPAAAKA 185 Query: 176 STVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLE 235 + L+++ S YL+R ++Y G + I R+ A+ QL Sbjct: 186 MEIASYVADHFREPLTLDSLSRQFHLSTSYLSRTFKKYTGFGLTEYIGITRVKEAQHQLR 245 Query: 236 MTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEF 278 T+ +T+IA E G+ S S F + FK +P+ YR + + Sbjct: 246 ETDERITEIAAEVGFESLSQFERVFKTHIRLSPRDYRNQYGQK 288 >UniRef50_D1PQZ7 Transcriptional regulator, AraC family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQZ7_9FIRM Length = 296 Score = 187 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 49/293 (16%), Positives = 103/293 (35%), Gaps = 25/293 (8%) Query: 6 INAPEIATAREQQLFNGKNFHVFIYNK-----TESISGLHQHDYYEFTLVLTGRYFQEIN 60 ++ REQ + +F V Y+ + +H H Y+E +G ++ Sbjct: 1 MSIVLDHQLREQIPPDILDFPVAFYSDELADLPDRAGPVHWHPYFEIATAQSGVLDYQVG 60 Query: 61 GKRVLLERGDFVFIPLGSHHQSFYEFG--ATRILNVGISK--------RFFEQHYLPLLP 110 + LE GD +F+ H G + + S + ++ P+L Sbjct: 61 QTHIRLEPGDSIFVNQNMLHGIRQLSGAAPDPLPILVFSGTVVAPEHSAVYRKYIQPVLG 120 Query: 111 YCFVASQVYRTNNAF----LTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREE-- 164 + V+R ++ + ++ R E V+ V+ + + + Sbjct: 121 CSTLPFVVFRHDSDLWQAVRQQIHRACDAMRERPACYELTVQRSLCSVLEAIFRHLDSLP 180 Query: 165 ----QVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQ 220 + Q + + L ++ A + S+ R Q Y G +P++ Sbjct: 181 PLPSSRVQLTAQIRLQKMLSYLYEHYAQPVTLADIAAAAHISRSEAGRCFQAYLGCSPVE 240 Query: 221 IINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 + + R+ A + L+ T+ + +I+ G+ S F + F+K P RK Sbjct: 241 ALIQYRLQRAWRMLQETDMTQQEISLACGFHSVQYFRRQFRKRYGCAPGEKRK 293 >UniRef50_C6D8V3 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8V3_PAESJ Length = 309 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 54/287 (18%), Positives = 105/287 (36%), Gaps = 25/287 (8%) Query: 13 TAREQQLFNGKNFH-----VFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLE 67 + E + +F + + G HQHD+ EF V++G E N + + Sbjct: 5 SFYEVKWRESGDFRPKIMAYYYKQWEDFHMGFHQHDWTEFMYVISGNCTVETNKDVIAMR 64 Query: 68 RGDFVFIPLGSHHQSFYEFG-ATRILNVGISKRFFEQHYLPLLPYCFVASQV-------- 118 +GD + + G H+ E G R+LNV + + Y + Sbjct: 65 KGDLIMLDAGVPHRLIVESGSPCRMLNVEFGFQPCDGIYPSMNQLANHNPMFSKLLEQRL 124 Query: 119 ----YRTNNAFLTYVETVISSL----NLRETGLEEFVEMVTFYVINRLRHYREEQVIDDV 170 R + ++ L +E G E ++ ++ R+ + + Sbjct: 125 DTIVLRDYEDIQVNLRNLVFELDLGGEGKEQGREMMTNLLMSQLLVRVGRLVAVEAKNST 184 Query: 171 PQWLKSTVE---KMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRI 227 + + V + + + +++ A YL R + KT + + ++R+ Sbjct: 185 ERQIHHYVRQATEYIHQYYDTAIQAKDIAAAVNLHPVYLQRIFKSNMNKTINEYLVDLRM 244 Query: 228 NFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 + AK L T+ + ++A G +S F FKK+T +P YRK Sbjct: 245 DKAKMLLARTDVPIIEVADHIGLNSRQYFSMLFKKMTGISPAEYRKS 291 >UniRef50_B5JHR7 Transcriptional regulator, AraC family protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JHR7_9BACT Length = 316 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 47/259 (18%), Positives = 100/259 (38%), Gaps = 21/259 (8%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKR 99 H HD+ E L+ G + G + GD + H +Y+ ++N+ Sbjct: 55 HTHDFCELALITRGSAMHWLEGAEFPITAGDVFVLQGQQSHY-YYDLQKLEMINIMFDPE 113 Query: 100 FFEQ-----HYLPLLPYCFVASQVYRTNNAFLTYVE--------------TVISSLNLRE 140 +P F+ ++R + F +++ + + + + Sbjct: 114 QLNLPETRLRKIPGYRALFLLEPLFRKQHRFTSHLHLSRSTLAHSERIAVELDNEVRGKM 173 Query: 141 TGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLK-STVEKMHDKEQFSESALENMVALS 199 G E + ++ L +E + L+ + V + E +E+ A++ Sbjct: 174 EGYEAAMFAKFVELVVYLSRLYQETESTNAEALLRVAKVIGSIEDEFTKPWKVEDFAAMA 233 Query: 200 AKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKT 259 S+ R + G+TP+ + ++RI + L T S+++IAFE G++ + + + Sbjct: 234 HMSRANFMRVFRTATGETPINYLLQLRIQKSMTLLTSTKLSISEIAFEVGFNDSNYYTRQ 293 Query: 260 FKKLTSFTPKSYRKKLTEF 278 FK +P +YR+ T F Sbjct: 294 FKASQGISPLAYRRTHTGF 312 >UniRef50_C3QPX4 Transcriptional regulator n=9 Tax=Bacteroides RepID=C3QPX4_9BACE Length = 325 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 42/272 (15%), Positives = 89/272 (32%), Gaps = 25/272 (9%) Query: 29 IYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG- 87 Y H H YE V G + + +GD + H Sbjct: 53 FYEYPRFTYPWHFHSEYEIIYVEKGEGDCLVGDSIISYSKGDLILFGSELPHSMQSPPDG 112 Query: 88 ------------ATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVE----- 130 R +N+ K F + + + + + Sbjct: 113 GEESDNEEKSELKVRGVNIQFEKDFMHYSISQYSQFIPIRNLLEDACRGIKFTITRSGKI 172 Query: 131 -TVISSLNLRETGLEEFVEMVTFYVINRLRH--YREEQVIDDVPQWLKS----TVEKMHD 183 ++ + + + + + ++ H Y P +++ V + Sbjct: 173 IKLLKQIPSAKGVDQIILLLSLLQMMATSNHRKYLTTSHYTPSPSIMRNERMEKVIAYLN 232 Query: 184 KEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTD 243 K L+ + + +A + R + GKT + + ++RI +A K L + +++ Sbjct: 233 KHYTESIGLDEIASYTAMNPTAFCRYFKENTGKTFKEYVLDMRIGYACKLLNSSMMNISQ 292 Query: 244 IAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 I+ G+ SP F + FK++T TP YR+++ Sbjct: 293 ISATCGFESPVHFNRIFKRVTGMTPTFYREQM 324 >UniRef50_B8I9A5 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I9A5_CLOCE Length = 289 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 48/280 (17%), Positives = 90/280 (32%), Gaps = 18/280 (6%) Query: 10 EIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 A+ E FN F + S + H H+++E G ING L+ Sbjct: 4 TNASNFEHISFNDITFPFNCFYIKNSNTLPHWHNHFEMVFSQKGSCMVYINGSSFLVSEN 63 Query: 70 DFVFIPLGSHHQSFYEFGATRILNVGISKRFFE---------QHYLPLLPYCFVASQVYR 120 + IP GS H F + G+ + + FE + P + F Sbjct: 64 QLIIIPPGSLHSIFPQ-GSCSYCAIVAGESLFEGLVADPHISEVLTPFMSIGFYPPLHLS 122 Query: 121 TNNAFLT----YVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVP----Q 172 + V + + + G ++ + + L+ + Sbjct: 123 EKDRVFKKCFLLVHELQRENDQKRNGYGARIKSQMIILFSVLQESLPSEFFKKNKLPDST 182 Query: 173 WLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKK 232 L + +M S ++ +R + GKT ++ + R+ A+K Sbjct: 183 RLIKYSLDYLRIHYSERITVNDMSVYCHLSIQHFSRLFKACTGKTFVEYLTLFRLEKARK 242 Query: 233 QLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 L T+ +T I G+ + + F + +KK P R Sbjct: 243 ILIGTDIPITQIPDLVGFCNSNYFCRLYKKYYGHPPSKDR 282 >UniRef50_C5RJE9 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RJE9_CLOCL Length = 285 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 49/284 (17%), Positives = 102/284 (35%), Gaps = 23/284 (8%) Query: 11 IATAREQQLFNGKNFHVFI-YNKTESISGLHQH-DYYEFTLVLTGRYFQEINGKRVLLER 68 +A + N + F FI Y + +H H D+ E +V+ G ++ ++ +++ Sbjct: 1 MAEMKLSYFTNDEGFPFFIQYGYHSNNLSIHTHTDFSELVIVMNGTATHIVDNEKFNIKK 60 Query: 69 GDFVFIPLGSHHQSFYEFGATRILNVGISKR-------------------FFEQHYLPLL 109 GD I + H + RI N+ E ++ Sbjct: 61 GDVFVINSNTCH-GYENAKDFRICNIMYRSENLLLADYDIKKNAGFHALFVIEPYFTKEH 119 Query: 110 PYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYRE-EQVID 168 + + +++++S + G + + + ++ L + + Sbjct: 120 SFKSNLTLKPLDFEKIHILLDSLLSEYMTKTDGWKTSTKALFMLLVVTLARLYDFGNSSE 179 Query: 169 DVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRIN 228 V + + + +++ + +S S + R Y TP+ I +RI Sbjct: 180 KVDVINIAKSISYIENHYTEDISIDLLAKISHYSPRHFARIFSETYSTTPLNYIISLRIR 239 Query: 229 FAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR 272 A L+ T ++ IA + G+S + F + FKK TPK YR Sbjct: 240 RACSLLKETTLPISTIAIQCGFSDSNYFSRIFKKNLYLTPKQYR 283 >UniRef50_C0D9W5 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D9W5_9CLOT Length = 316 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 46/278 (16%), Positives = 97/278 (34%), Gaps = 10/278 (3%) Query: 8 APEIATAREQQLFNGKNFHVFIYNK-----TESISGLHQHDYYEFTLVLTGRYFQEINGK 62 +E+ F +F V +Y + LH H + + G +NG+ Sbjct: 17 ISTNEKQQEEVRFLSGDFPVSVYTQHYRYAASDYVPLHWHGELQVLWIAEGALEYSVNGR 76 Query: 63 RVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFF-----EQHYLPLLPYCFVASQ 117 +L + + H S G +R L + + F E + LPLL Sbjct: 77 HFVLGPDKLLLVNRRQLHGSRTMGGDSRTLCINFTPDIFHPLIRENYVLPLLQSDSFTHS 136 Query: 118 VYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKST 177 + ++T ++ + + + + L T Sbjct: 137 LLLLLPYQTEKLKTFLNWKCEPLQYFSVINFLSLVFEDILGSSENTKNPQNYEEIKLIQT 196 Query: 178 VEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMT 237 + + + + A + ++ T ++Y G +P++ +NE R+ AK + + Sbjct: 197 MIRFVQTHYAEPLTVRQISAYAITNKNRCTALFRKYTGLSPIKYLNEYRLYTAKNMIVSS 256 Query: 238 NYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 + +++I+ + GY+ S FI+ F+ P YR + Sbjct: 257 DKPISEISSDVGYNQISYFIEQFRGSYGLPPLKYRNQF 294 >UniRef50_C4G7L2 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G7L2_ABIDE Length = 272 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 106/251 (42%), Gaps = 9/251 (3%) Query: 28 FIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFY-EF 86 + + + S +H H + E LV G + L++GDF+ + + H E Sbjct: 25 YTKYENDWPSFMHTHPFTELFLVTGGVGEFYVENNIYPLKKGDFILVNPNASHTEKSDEK 84 Query: 87 GATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEF 146 + V + L L + N + Y++++++ + + Sbjct: 85 NPLEYIAVA-----VDNFSLNLTDTNHLMFNCISKNPNIIKYMDSMLAEQEGNKAYSDHI 139 Query: 147 VEMVTFYVINRLRHYREEQVIDDVPQWLKS---TVEKMHDKEQFSESALENMVALSAKSQ 203 + + ++ + + + + ++K D S+ ++++ LS ++ Sbjct: 140 CQNILEIILIEILRITKSDIDTEPTVNASKECFKLKKYMDSNYASKITIDDLAKLSNLNK 199 Query: 204 EYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKL 263 YL + +Y+G +P+ + IRI AK+ LE ++YS++ I+ G+SS S F + F K Sbjct: 200 YYLIHSFNKYFGSSPINYLCGIRIRAAKELLENSDYSISQISQSTGFSSQSYFTQCFIKS 259 Query: 264 TSFTPKSYRKK 274 +PK+YR + Sbjct: 260 CGLSPKAYRNR 270 >UniRef50_C7IFZ3 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IFZ3_9CLOT Length = 296 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 55/279 (19%), Positives = 104/279 (37%), Gaps = 25/279 (8%) Query: 21 NGKNFHVFIYNKTESI-SGLHQH-DYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGS 78 +F FI H H D++E +VL G +N + +++GD + Sbjct: 11 QDPSFPFFIQYGFHDDAMPEHFHHDFFELVIVLNGTATHIVNSEEFFIKKGDVFVFNMDL 70 Query: 79 HHQSFYEFGATRILNVGISKRFFEQHYLPLLPY-----CFVASQVYRTNNAFLTYVE--- 130 H + + +I+N+ ++ + FV +R +F + Sbjct: 71 SH-GYKDPHNFKIINIMYKPERLDEICNDIKKSPGYQALFVLEPFFRKKYSFSNTLSLSI 129 Query: 131 -----------TVISSLNLRETGLEEFVEMVTFYVINRLRH--YREEQVIDDVPQWLKST 177 + ++ G + + ++ L E +++ D L Sbjct: 130 SSLEYVAELGARINEEYKRKDQGYQTMIYARFMEMVVYLSRQYIIENKLLHDTFVHLAKA 189 Query: 178 VEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMT 237 + + + LE + + S + R + YG TP I +R+N A L+ + Sbjct: 190 IL-FLEDNYLNPIKLEKLADEAHMSVRHFNRIFKENYGTTPFNCILHLRVNHACSLLKNS 248 Query: 238 NYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 N + DIA E+G+S + F + FKK+T TPK YR + Sbjct: 249 NLCIADIALESGFSDSNYFSRQFKKITGITPKEYRARYK 287 >UniRef50_C7PTM2 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PTM2_CHIPD Length = 291 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 53/281 (18%), Positives = 99/281 (35%), Gaps = 16/281 (5%) Query: 11 IATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 + RE + + V + T + LH H YE L+L G + + GD Sbjct: 1 MKLYRENIIPSSNILVVKEEHFTVNEFPLHFHPEYELILILNGSGKRFVGNNIAEFSSGD 60 Query: 71 FVFIPLGSHHQS----FYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFL 126 F H + V ++ F + + P+ + + + ++ F Sbjct: 61 LCFFGPNLPHTYSNKHIAGPRDIHQIVVQFNEDFLGKGFFDKAPFKPIRALLDKSIRGFT 120 Query: 127 TYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYRE------------EQVIDDVPQWL 174 ET+ + +E V +++ L + D Sbjct: 121 FTGETLQEVTRMIRAMVEMDETAVVIQLLSVLYTLAKSAEFELLSSRGFSSKSDRAESER 180 Query: 175 KSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQL 234 V + E L + +++ S E R ++Y KT + + E+RI A K L Sbjct: 181 MGRVMDYILRNFREEIPLNVIASVACLSPEAFCRYFKKYTRKTFSEFLIEVRIGHACKLL 240 Query: 235 EMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKL 275 + V I+ ++G+++ S F + FK +T TP Y+K Sbjct: 241 QQQLLGVNQISMQSGFNNISYFNRKFKSMTKKTPVEYQKMF 281 >UniRef50_A7AA81 Putative uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AA81_9PORP Length = 287 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 45/257 (17%), Positives = 92/257 (35%), Gaps = 12/257 (4%) Query: 25 FHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFY 84 F + E G H+H E V G + + + + + I H Sbjct: 29 FRFVSFRPFE-TFGPHKHLRIEINYVKKGNCILHLENESISFSENEMMVICSNVEHTFEA 87 Query: 85 EFGATRILNVGISKRFFEQHYLP------LLPYCFVASQVYR-----TNNAFLTYVETVI 133 T ++ + F + L + S+ R N + V+ ++ Sbjct: 88 GSEDTTLMQLEFLPEVFSRFNPDGHGQMKDLAPVTIFSEENRLIKIVNNVRIMRAVQRIV 147 Query: 134 SSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALE 193 + +N + + V M ++ + Y +E + S+ + Sbjct: 148 NEMNQKSKYYQYLVVMYYAELLILIYRYLDEAYLPICTNDSLKKAISYIRLNYQSDITIS 207 Query: 194 NMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSP 253 ++ + + + YL + +Y +P+ +N+IRIN A + L T SV ++ F G+ SP Sbjct: 208 DVASQTGVGERYLRKLFSQYLNLSPLDYLNQIRINKAIELLRNTEMSVKEVCFACGFQSP 267 Query: 254 SLFIKTFKKLTSFTPKS 270 F + FK+ +P+ Sbjct: 268 QYFSRIFKQQMGISPRE 284 >UniRef50_C6D149 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D149_PAESJ Length = 279 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 68/280 (24%), Positives = 106/280 (37%), Gaps = 15/280 (5%) Query: 6 INAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVL 65 +N P + A NFH+ + LH HD+YE +V++G+ +NG L Sbjct: 1 MNVPMLYAAALIDPLVQSNFHIV--HSVRHAYPLHGHDFYEIFIVISGQCTHLVNGDTQL 58 Query: 66 LERGDFVFIPLGSHHQS-FYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNA 124 L G VFI H E G R LNV K E + + F + Sbjct: 59 LREGAMVFIRPDDTHSYDLLEGGDCRFLNVNFYKEVVEGAFDYIGHAAFAQALRSPQLPP 118 Query: 125 FLTYVETVISSLNLRETGLEE-----------FVEMVTFYVINRLRHYREEQVIDDVPQW 173 F+ T + +L + ++ + +PQW Sbjct: 119 FIMLPGTDMEALMRKSEQIQLFNSTDKQKARTMARSFLSDALTHFFLEFRNDGTQAMPQW 178 Query: 174 LKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQ 233 + ++ KE FS + L + L+ +S +L R ++Y TP +N +R+ AK Sbjct: 179 FDHLLAQLQRKENFS-AGLPRLRELTDRSDGHLNRVFKQYLRMTPTAYLNHLRLGHAKNL 237 Query: 234 LEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 L T + DIA+EAG+ + S F FK P R Sbjct: 238 LLTTQLPIVDIAYEAGFDNLSHFYHLFKDAYGIAPGKIRN 277 >UniRef50_C3X9W6 Helix-turn-helix domain-containing protein n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3X9W6_OXAFO Length = 293 Score = 187 bits (475), Expect = 5e-46, Method: Composition-based stats. Identities = 51/258 (19%), Positives = 93/258 (36%), Gaps = 17/258 (6%) Query: 30 YNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGAT 89 Y K +H H+ +F VL G + + L G VFI H + G Sbjct: 34 YPKNPGFLVMHWHEDLQFIYVLEGEIEVRTLDEELKLAAGHGVFINKNVVHSV-NQSGDC 92 Query: 90 RILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYV---------ETVISSLN-LR 139 + +F + Y V S V + ++ +++ L+ L Sbjct: 93 HYKSFIF-PDYFLRFYFGSPAEHLVDSLVENMDVPLCRFIPGIGWCDTVLSILRKLSFLE 151 Query: 140 ETGLEEFVEMVTFYVINRLRHYREEQVIDDVP-----QWLKSTVEKMHDKEQFSESALEN 194 + G E +V V ++ + R+ + +K +L++ Sbjct: 152 KNGNEFYVYEVLVFLTSLWLEIRKNVSLPSGKKEKPVSRRMQRFLAYIEKHYAEAISLDD 211 Query: 195 MVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPS 254 + S+ R + TP + + E R++ A L+ T+ V +IA G+ S Sbjct: 212 LAGSGNVSKSECLRCFRVSMQTTPYKYLVEYRLSKAAILLQETDKPVGEIASCTGFHQAS 271 Query: 255 LFIKTFKKLTSFTPKSYR 272 F K F++ T F+P+ YR Sbjct: 272 YFGKCFREKTGFSPRDYR 289 >UniRef50_Q184W8 AraC-family transcriptional regulator n=5 Tax=Clostridium difficile RepID=Q184W8_CLOD6 Length = 295 Score = 187 bits (475), Expect = 5e-46, Method: Composition-based stats. Identities = 52/278 (18%), Positives = 101/278 (36%), Gaps = 22/278 (7%) Query: 24 NFHV-FIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQS 82 F + N+ E ++ H H E L+ G IN K + L++G+ V I G H Sbjct: 13 EFPFRSLSNEGEVLTTPHWHKEIEILLITEGVVNLFINDKPMQLKKGEIVIIKGGDIHYI 72 Query: 83 FYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVY-----------RTNNAFLTYVET 131 G+ L FF L + + + + + Sbjct: 73 LPSPGS-ERLVFQFDISFFNDLILLNEEKESLINLFSSIKKCSRDWSAKIRKSVFDILID 131 Query: 132 VISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQW---------LKSTVEKMH 182 + + + G ++ + +I L ++ ++ ++ + + K Sbjct: 132 IYNEDLYKIEGYSYAIKGKMYNLIPILYRQIPREIEENTVEYEINSKEILERLNNIFKYV 191 Query: 183 DKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 +K LE++ S Y T+ ++ GKT + +NE R+ AK L N S+ Sbjct: 192 EKNYKQPIKLEDVSYEVGFSVYYFTKFFKKNTGKTFITFLNEYRLEKAKWILLNNNISIV 251 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 D+ E G+ S F + FK+ +P ++K+ + Sbjct: 252 DLVEEVGFGSTKTFYRVFKEKIGVSPLEFKKRYNSLEK 289 >UniRef50_C4Z7U7 LacI family transcriptional regulator n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z7U7_EUBE2 Length = 304 Score = 186 bits (474), Expect = 5e-46, Method: Composition-based stats. Identities = 61/255 (23%), Positives = 103/255 (40%), Gaps = 17/255 (6%) Query: 40 HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILN---VGI 96 H H+ YE ++ G + K GD + H + + N + I Sbjct: 32 HFHNQYEIFYIIEGERQFFFDNKSYNAYAGDIAILDTNLVHTTCSISDEDKGYNRVILYI 91 Query: 97 SKRF---FEQHY--LPLLPYCFVASQVYRTNNA----FLTYVETVISSLNLRETGLEEFV 147 F++ Y L L+ Y +Y N FL + L + +G + V Sbjct: 92 DYEKMCDFDKKYPGLNLVNYFHNNYGIYHLNEDQRIAFLNLYRDLRHELTKKNSGYQSRV 151 Query: 148 EMVTFYVINRLRHYREEQV-----IDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKS 202 E+ T Y + +L + + I+ + S + + E AL+ + S Sbjct: 152 EIATIYWLYKLLSLKHDSTQIHAVINSPKELSASNISAYLEANYTKELALDTISDELFMS 211 Query: 203 QEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKK 262 + Y+ R + Y G T + +N +RI A + LE +N S++D+A E G+ S S F + FKK Sbjct: 212 KYYMCRIFKEYTGFTITEYVNTLRIKKATQILESSNLSISDVAAELGFESASYFERIFKK 271 Query: 263 LTSFTPKSYRKKLTE 277 + + TP YRK Sbjct: 272 IMTVTPLKYRKTHQS 286 >UniRef50_C0EGG3 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGG3_9CLOT Length = 343 Score = 186 bits (474), Expect = 6e-46, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 101/258 (39%), Gaps = 24/258 (9%) Query: 46 EFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHY 105 E + G Q K + L++ D + + + H + + N+ ISK FEQ Sbjct: 72 ELIYMYRGGSIQFFQDKELELKQHDILILNPNTIHAPYTTQEEDCLFNILISKSLFEQSM 131 Query: 106 LPLL---------------------PYCFVASQVYRTNNAFLTYVETVISSLNLRETGLE 144 + LL Y + S ++ +E +I+ ++ G + Sbjct: 132 MSLLYDNHMFTGFIADCLYHVSTAVEYLYFPSGNNGMSDENSFLIEKLIAEYINKKEGYK 191 Query: 145 EFVEMVTFYVINRLRH-YREEQVIDDVPQWLKSTVEKM--HDKEQFSESALENMVALSAK 201 ++ + L + + + + + ++ + + +L+ + Sbjct: 192 NSMKAWLVLLFLNLSRTHSQLHPLKQGEFDNRGVIAEIISYINNNIEDVSLKGLSEQFNY 251 Query: 202 SQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFK 261 S EYL+R ++ G++ ++I+ ++ AK LE ++ ++ + +G+ S + F K FK Sbjct: 252 SPEYLSRIIKQNTGQSFIEIVKRFKMEKAKYYLETSDLPISAVMNLSGFKSINYFYKVFK 311 Query: 262 KLTSFTPKSYRKKLTEFN 279 + +P +YRK N Sbjct: 312 RYNGISPSAYRKGARHAN 329 >UniRef50_C0D4Y3 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D4Y3_9CLOT Length = 291 Score = 186 bits (474), Expect = 6e-46, Method: Composition-based stats. Identities = 47/269 (17%), Positives = 89/269 (33%), Gaps = 19/269 (7%) Query: 25 FHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFY 84 F+ + + H+H +E + +L+G + GD H Sbjct: 20 FYHSVLPPLKRAYSEHKHTAFEISCILSGSGLYKTQNALYHFHAGDIFLYSTNEIHYIIE 79 Query: 85 EFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNN------------AFLTYVETV 132 F ILN+ RF L ++ ++ + + Sbjct: 80 IFDNCDILNLHFEPRFIWSPGNDLFDSKYLNIFFNHGDSFENCLEQDEDTARIRQLLLEI 139 Query: 133 ISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKST-------VEKMHDKE 185 N + E V++ ++ L + +S D Sbjct: 140 EKEFNEKLPDYELMVKVKVLTILVTLGRNFNFSIPQKALSQSRSQHLLQLDKALAYIDDN 199 Query: 186 QFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIA 245 S+ L + + S+ Y + + G TP + I R+ A L T++S+ DIA Sbjct: 200 ISSDIDLNTIAKTAHMSRSYFSTIFKEMNGLTPWEYIINKRVELAAHYLTSTDFSILDIA 259 Query: 246 FEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 + G+++ + F FKK+T +P +RK Sbjct: 260 CKCGFNNTANFNHAFKKVTRKSPSDFRKS 288 >UniRef50_C0EBM6 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBM6_9CLOT Length = 383 Score = 186 bits (474), Expect = 6e-46, Method: Composition-based stats. Identities = 52/271 (19%), Positives = 102/271 (37%), Gaps = 26/271 (9%) Query: 32 KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRI 91 +T +GLH H+Y+ T V G + G+ ++GD F+ H+ + Sbjct: 108 RTHFETGLHTHEYFVITYVFRGECYCYFGGEEFHFKQGDIWFLNTQVSHKLLLPGDDCVV 167 Query: 92 LNVGISKRFFEQHYLPLLPYC-----FVASQVYRTNNA-------------FLTYVETVI 133 ++ + + F L + F + ++ +N Y+ ++ Sbjct: 168 FHICLRQTSFCSVLLDKIKNNEQFVHFFVNSIFDEDNNPCLMQFHIRELSVAQYYLFKML 227 Query: 134 SSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWL-------KSTVEKMHDKEQ 186 ++ +E + + ++ +L E + ++ S V + Sbjct: 228 EEYYDQKMHSQEVIAYLFCCLLIQLERNCEAEAVEQEAHRNGRQKNLDISEVIAYLMEH- 286 Query: 187 FSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAF 246 L+ + YL+R QR+ GKT ++ +N IR+ A + L T + I+ Sbjct: 287 QQTVTLQQAASHFHYVPAYLSRFIQRHTGKTFLEFLNGIRLERAAEMLRNTTLPIRQISH 346 Query: 247 EAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 GYS S F ++FK+ TP+ YR E Sbjct: 347 MVGYSDRSSFDRSFKRQYHMTPRKYRDNGRE 377 >UniRef50_A5GD53 Transcriptional regulator, AraC family n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5GD53_GEOUR Length = 291 Score = 186 bits (474), Expect = 6e-46, Method: Composition-based stats. Identities = 54/271 (19%), Positives = 101/271 (37%), Gaps = 8/271 (2%) Query: 14 AREQQLFNGKNFHVFIY---NKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 R F G VFI +I+ H H Y F L I GK VL + G Sbjct: 21 LRYVDCFIGNEIGVFIPAVGPCFYAITPDHSHPAYSFVLTFDSYTRLAIGGKTVLSQPGQ 80 Query: 71 FVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHY--LPLLPYCFVASQVYRTNNAFLTY 128 + I + H R + + I + FE+ P + + + + Sbjct: 81 IMAIDPDAVHHEMTADETPRYIAIFIDRDLFEKELGRYPSIRPRPFRFRTFTPGREMMGL 140 Query: 129 VETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDV---PQWLKSTVEKMHDKE 185 ++ ++ R E + + +++ L + D + V + Sbjct: 141 LKEFMNEAEARLPAREPLLAAIGTRIVHALIRAAHGIITPDASIGNRVEIHRVIEYIQTH 200 Query: 186 QFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIA 245 + ++ + A++A S + +R +R G P+ +N +R+ A+K L SVT +A Sbjct: 201 AGKKLSIGQLAAVAAMSTSHFSRIFKRETGHPPLAYLNRVRLEQARKLLRTGECSVTSVA 260 Query: 246 FEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 G++SPS F +F++ +P + K Sbjct: 261 LSCGFASPSHFTDSFRRFYGQSPTDFLKSYK 291 >UniRef50_A5KPF1 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KPF1_9FIRM Length = 260 Score = 186 bits (473), Expect = 8e-46, Method: Composition-based stats. Identities = 45/254 (17%), Positives = 96/254 (37%), Gaps = 9/254 (3%) Query: 28 FIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYE-F 86 + + + S H H + E VL G + + + + + + I H + Sbjct: 10 YSKYEQDWESYPHTHYFSELFYVLNGCGSFIVEEESFPIRKQNLIIINPSIRHTEVSDKN 69 Query: 87 GATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNLRETGLEEF 146 + +G+ ++L ++ Q + Y T++ ++ ++ E Sbjct: 70 SPLEYIVLGVEGL----NFLIYNDKEYLNIQCEDFSENLDFYFHTILREMDEQKESYETI 125 Query: 147 VEMVTFYVINRLRHYR----EEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKS 202 + + +I +L + E S ++ D L+ + L+ + Sbjct: 126 CQNLLEALIIQLSRHTGSPVEMLPSSKKITRECSYAKRFIDSNFRENITLDTLAELTHLN 185 Query: 203 QEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKK 262 + Y YG PM + + RI +++ L T+ + IA + G+SS S F + F+K Sbjct: 186 KYYFAHTFTEIYGIAPMNYLAQKRIFTSQELLTSTDLNQAAIAKQCGFSSSSYFSQCFRK 245 Query: 263 LTSFTPKSYRKKLT 276 + TP +YRK+ Sbjct: 246 ICGMTPTAYRKQFI 259 >UniRef50_A9KK32 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=A9KK32_CLOPH Length = 295 Score = 186 bits (473), Expect = 8e-46, Method: Composition-based stats. Identities = 48/292 (16%), Positives = 98/292 (33%), Gaps = 23/292 (7%) Query: 6 INAPEIATAREQQLFNGKNFHVFIYNKTESISG-----LHQHDYYEFTLVLTGRYFQEIN 60 + +E + F I + S H H E TL++ G +N Sbjct: 1 MQIITNKFHKEMKEHGNDQFPFLISYERLSKYESGSFLWHWHPEIELTLIVKGDMIYTVN 60 Query: 61 GKRVLLERGDFVFIPLGSHHQ-SFYEFGATRILNVGISKRFF---------EQHYLPLLP 110 + L G+ +F + S H + +E +++ + ++ P+ Sbjct: 61 DHPLHLHEGEALFGNVSSFHTGTKFENKDCEYISITFDPKLIYGYENSITYRKYVEPITQ 120 Query: 111 YCFV----ASQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREE-- 164 + +N + ++ +I+ +E E + M + L + Sbjct: 121 NFSLSAIQLDYSEEWHNNIIEIIKEIIAIGQNKEASYELDILMRLQQLWKILYLHNNSAP 180 Query: 165 --QVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQII 222 D ++ D + LE + + R +RY + + I Sbjct: 181 AMTPYDKRNYDRIRSILSYVDNNYAMKLTLEEIAEHIHLCKSECCRLFKRYMKVSLFEFI 240 Query: 223 NEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 + RI + L + YS+ +IA G++ + + K F K+ +P YRKK Sbjct: 241 LQYRIEKSLNYLADSQYSIIEIANFVGFNDSNYYSKVFTKIKGCSPTKYRKK 292 >UniRef50_B2TRB4 Transcriptional regulator, AraC family n=5 Tax=Clostridium RepID=B2TRB4_CLOBB Length = 305 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 53/300 (17%), Positives = 90/300 (30%), Gaps = 35/300 (11%) Query: 14 AREQQLFNGKNFHVFIYNKTES----ISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 +E + F Y I H HD E + G + EI+ + ++ Sbjct: 6 LKEIKKHGTAYFPCAFYYTESDSENLIVKHHWHDQLELIHMKKGEFQVEIDMDKHVVHEE 65 Query: 70 DFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLP-------------LLPYCFVAS 116 FI H + + + L Sbjct: 66 TICFINSEELHFIKS-NHPCKESAIVFDLKMLSFDMFDSIQGSLIQPLLNGELKMPHFIF 124 Query: 117 QVYRTNNAFLTYVETVISSLNL-------------RETGLEEFVEMVTFYVINRLRHYR- 162 + + L ++ + + + + ++ ++ L Sbjct: 125 KKDKHGEEILKEYSEILEAYKISGQISQNPEGNITEKLSSQIKIKASLLKILAILYENNL 184 Query: 163 ---EEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPM 219 E D T + ++++ +++Y R +R GKTPM Sbjct: 185 LIKENNKNKDYRVEYIKTAISYIQNNYSEKIHIKDLSKQINMNEQYFCRFFKRMIGKTPM 244 Query: 220 QIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFN 279 + +NE RI AK+ L TN V DI E G+ + FIK FKK T P YRK Sbjct: 245 EYVNEYRIKKAKELLRETNRQVMDICLECGFHNMGNFIKVFKKHTGINPMKYRKNFINKK 304 >UniRef50_C6J603 Transcriptional regulator n=5 Tax=Bacilli RepID=C6J603_9BACL Length = 288 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 55/288 (19%), Positives = 96/288 (33%), Gaps = 22/288 (7%) Query: 11 IATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 ++ E F N +I H H E G+ + + V LE G+ Sbjct: 1 MSEYLEIPEFQDSILFRTFLNDGMTIVYPHWHKEIEIIYSRKGKVNIGVREEIVQLEEGE 60 Query: 71 FVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVA----------SQVYR 120 F P G H + R + + + F++ L + + + Sbjct: 61 IFFFPSGEAHYFLASPESERYVY-QFNLKLFDERTLRISEDSLLNLFETGEPLSRNWPQG 119 Query: 121 TNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQW------- 173 + + + G+ + +I + + ++P Sbjct: 120 LAQKATELLIHLYEVEQTKPMGMNYLTLGYLYQLIGEFYLHLPRRQTSNLPSKRSTIQHK 179 Query: 174 ----LKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINF 229 L + V + + LE++ S Y TR + G+T MQ + E RIN Sbjct: 180 ETLDLLNQVFEYVENRYREVITLEDVAKFVGFSPYYFTRFFKANTGQTFMQFLTEYRINQ 239 Query: 230 AKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 AK L N + ++A +AG++S F FK +P YRK L E Sbjct: 240 AKFILANENIPMAEVADKAGFASVKTFHHVFKDEVGQSPLQYRKNLIE 287 >UniRef50_C9AW67 Transcriptional regulator n=2 Tax=Enterococcus casseliflavus RepID=C9AW67_ENTCA Length = 329 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 48/277 (17%), Positives = 107/277 (38%), Gaps = 21/277 (7%) Query: 18 QLFNGKNFHVFIYNKTESI-SGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPL 76 K+ FI + +H HD+ EF + G+ Q IN + L G + + Sbjct: 50 SQMITKDQPFFIKRHSRFQNYPIHCHDWIEFNYMYAGKCQQIINNEPHFLYEGQILLMDA 109 Query: 77 GSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVY----------------- 119 + H+ ++N+ I K + ++ V + + Sbjct: 110 NTVHKIEPLGEDDILINLIIPKYYLTANFFNRFSSESVLTSFFIEAITHGMKHDRFIHFA 169 Query: 120 -RTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTV 178 T + + ++ R T + E + +I+ L + ++ D Q+ KS + Sbjct: 170 SETRTRLQFFFKELLCEWFDRSTAYTDICEGLLGLIISDLVNIYQDSYTDRSDQYRKSPI 229 Query: 179 EKM--HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEM 236 + + ++ ++ L + + YL+ +++ G + +++ RI A + L Sbjct: 230 VPILKYIEKNYANLTLTELSEQFNLNPNYLSNLLKKHTGYSYKKLVINQRILAADRFLLS 289 Query: 237 TNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 T+ + DI+ + G+ + + F + FK++ TP RK Sbjct: 290 TDMDIVDISQQVGFENINFFYQKFKEVYGVTPGMRRK 326 >UniRef50_A7AFT7 Putative uncharacterized protein n=2 Tax=Parabacteroides RepID=A7AFT7_9PORP Length = 289 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 46/264 (17%), Positives = 93/264 (35%), Gaps = 19/264 (7%) Query: 32 KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGAT-- 89 + LH H E V+ G ++ I E G+ V +P H Y + Sbjct: 26 YPKDEMPLHFHPEIEICYVVKGSGYRMIGDFLEPFEEGEVVLVPTNQPHCWMYNPESCEP 85 Query: 90 ----RILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFL------TYVETVISSLNLR 139 R + V + + + + A ++ L +++ + +NL Sbjct: 86 DGKRRCIVVQFNPDLLQTGLSFFTEWEYAAHRLSAIQQGILLTGETAGKIKSCLEEMNLL 145 Query: 140 ETGLEEFVEMVTFYVI----NRLRHYREEQVIDDVPQWLKST--VEKMHDKEQFSESALE 193 + + I + + +E + + + ++ + K + + L Sbjct: 146 NASERMLMLIRILQQIGTTTDLIPIGLQETAFNGITKNMQRMQLIFKYVIEYYKEKITLS 205 Query: 194 NMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEM-TNYSVTDIAFEAGYSS 252 + + + S +R GKT INE RI L + + +IA++ G++ Sbjct: 206 DAANVISMSTTAFCSFFKRETGKTFTNFINEYRIEAVGTLLRNFPDKDINEIAWQCGFTD 265 Query: 253 PSLFIKTFKKLTSFTPKSYRKKLT 276 F + FKK+ TPK +R K+ Sbjct: 266 IPYFNRYFKKMKQMTPKQWRYKIQ 289 >UniRef50_B1QXT7 Transcriptional regulator, AraC family n=3 Tax=Clostridium RepID=B1QXT7_CLOBU Length = 289 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 102/279 (36%), Gaps = 16/279 (5%) Query: 18 QLFNGKNFHVFIYNKTESISGLHQ----HDYYEFTLVLTGRYFQEINGKRVLLERGDFVF 73 + F+ NF + K++ + H H + E + G ++ V ++ D + Sbjct: 11 KNFSDFNFELLYITKSKFENDWHSTAHIHPFMEIFFITEGNGSFQLEDSTVNVKEYDLII 70 Query: 74 IPLGSHHQSFYE--FGATRILNVGISKRFFE------QHYLPLLPYCFVASQVYRTNNAF 125 I H + +GI + + + + + ++ Sbjct: 71 INPNCLHTEKSNLNTSPLEYIVLGIDNFSINFFNLNNEKFSQSDSKNYHVINLKKNSSII 130 Query: 126 LTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREE----QVIDDVPQWLKSTVEKM 181 L + +I + L+ E + + I + Q + ++ Sbjct: 131 LNQLNLIIDEIKLKNYKYEVACKSMLSLFILNILRTIPSMSILQNEKKNLNLECAKIKNY 190 Query: 182 HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSV 241 D LE + LS ++ L A + G +P+ + E RI AK LE TNYS+ Sbjct: 191 LDSHYSENITLETLSNLSYMNKFSLVHAFTKQIGMSPISYLIEKRITEAKSLLETTNYSI 250 Query: 242 TDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 DI G+S+ S F + FKK T+ +PK Y+ + + + Sbjct: 251 KDIGSIVGFSNSSYFSQMFKKQTNLSPKQYKVNMIKNPK 289 >UniRef50_B1R1K3 Transcriptional regulator, AraC family n=2 Tax=Clostridium butyricum RepID=B1R1K3_CLOBU Length = 285 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 54/271 (19%), Positives = 110/271 (40%), Gaps = 8/271 (2%) Query: 16 EQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIP 75 E L ++ LH H+ EF LVL G +IN K + ++RG+ F+ Sbjct: 9 ETDLLIPAKIYIGNSKGENCHYPLHWHNNLEFVLVLCGEIKGKINNKYIDVKRGEIFFVN 68 Query: 76 LGSHHQSFYEFGA-TRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVIS 134 G H+++ + + + +S ++++ + Y F + + + Sbjct: 69 SGELHETWANDKNKIKAITILLSYELLKKYFPNIDSYYFDFEEKEDSKGKIKDLIVKCGE 128 Query: 135 SLNLRETGLEEFVEMVTFYVINRLRHYREEQ-------VIDDVPQWLKSTVEKMHDKEQF 187 +E E + +V + N L ++ I++ + ++ Sbjct: 129 IYTNKENFYELNMSIVLMELCNILFKECLKEKEVGNIYNIEEKREVNIKRAITYMEENYD 188 Query: 188 SESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFE 247 + +L ++ + Y +R ++ G+T +N+IR+ + K+L T S+T+IA Sbjct: 189 LDLSLSDISREIGMAPTYFSRFFKKNTGETFYSYLNKIRLYHSYKELINTEASITEIALN 248 Query: 248 AGYSSPSLFIKTFKKLTSFTPKSYRKKLTEF 278 G+S+ FI+ FKK + TP YR + Sbjct: 249 NGFSNVKSFIEIFKKAYNNTPAKYRNESKRI 279 >UniRef50_C6D5P5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D5P5_PAESJ Length = 276 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 54/266 (20%), Positives = 106/266 (39%), Gaps = 13/266 (4%) Query: 21 NGKNFHVFIYNKTESISGL-HQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSH 79 F V + H H YE +++G+ I + +++ GD V I Sbjct: 9 GEGTFSVSYRKARSHNMPVSHFHSTYEIFCLMSGKREFFIKDRTLVIHEGDIVIISPNIL 68 Query: 80 HQSF--YEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVY-----RTNNAFLTYVETV 132 H++ R++ K Y+ +L + + A T ++T+ Sbjct: 69 HRTTNTETPEHERLIVNIHEKHMAAGSYVDVLHPLSEREYLIVKCTLQDRLAIETMLQTM 128 Query: 133 ISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQ-----WLKSTVEKMHDKEQF 187 I+ ++ ++ G E + + ++ + + ++ + S V + + Sbjct: 129 IAEMSEKKPGFELYALTLALQLLLICCRHAKSSSMETLESPSPMHERISEVVRYMNSHYM 188 Query: 188 SESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFE 247 +E +L + S YL+R + G T ++ +N +RI AKK LE ++ V IA Sbjct: 189 NELSLHLLAEKFYVSPYYLSRFFKEATGFTFVEYLNSVRIKEAKKLLEQSSMKVNLIAKR 248 Query: 248 AGYSSPSLFIKTFKKLTSFTPKSYRK 273 G+ S + F + FK +T + P YRK Sbjct: 249 VGFGSVTHFGRVFKSVTGYVPLHYRK 274 >UniRef50_A9E4Z4 tRNA delta(2)-isopentenylpyrophosphate transferase n=1 Tax=Kordia algicida OT-1 RepID=A9E4Z4_9FLAO Length = 288 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 98/261 (37%), Gaps = 14/261 (5%) Query: 31 NKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH---QSFYEFG 87 LHQH+ + + +++G+ I + D + H Sbjct: 22 RGRTFYEQLHQHEEIQLSYIVSGKGTFIIGDTIRDFQPNDVLLFGSNVPHVLKSDVTTDE 81 Query: 88 ATRILNVGISKRFFEQHYL---------PLLPYCFVASQVYRTNNAFLTYVETVISSLNL 138 + ++++ + F +H+ LL + + + + E V+ +L Sbjct: 82 DSYMISLFFTHDSFGEHFFMLPKLQQLQKLLNDARFGVKFTKHSTIVKSLFEGVLHQNSL 141 Query: 139 RETG-LEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVA 197 ++ E + ++T + + + D S V + + LE++ Sbjct: 142 QQFATFFEILSVLTPSDYETVSSFINTKNYTDDEGKRMSAVFEFVMNHFDQKIILEDIAT 201 Query: 198 LSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTN-YSVTDIAFEAGYSSPSLF 256 ++ + + ++ KT + + E+RI A K L ++ S+ +IA+ G+ + S F Sbjct: 202 VANMTPNAFCKYFKQRTNKTFFRFLTEVRIENACKFLTNSSQLSIAEIAYSCGFFNVSNF 261 Query: 257 IKTFKKLTSFTPKSYRKKLTE 277 + FK++ TP +RK T Sbjct: 262 NRKFKEIKGLTPTKFRKSYTS 282 >UniRef50_B0P341 Putative uncharacterized protein n=9 Tax=Clostridiales RepID=B0P341_9CLOT Length = 282 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 51/276 (18%), Positives = 104/276 (37%), Gaps = 12/276 (4%) Query: 11 IATAREQQLFNGKNFHVFIY----NKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLL 66 + + + + ++ ++ I H H E V G +N + LL Sbjct: 1 MTEIQHELIMTNEDLPFKMFLFEGRDGNYIREKHWHRSIEIFAVFQGTLGFYLNDQEYLL 60 Query: 67 ERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFL 126 E GDF+ + H + + + FE++Y CF + + + + Sbjct: 61 ECGDFIIVNSNEVHSIHAPKENMTV-VLQMPLNMFEKYYTGDQFICFAHAPQAQ-DEQLM 118 Query: 127 TYVETVISSLNLRETGLEEFVEMVTFYVINRL-RHYREEQVIDDVPQWLKS-----TVEK 180 + + + + + G + ++ + + ++ + YRE V D+ K + Sbjct: 119 EMICEMYMAYSDKHCGYDLKIQSLFYDMLYLMVTRYREINVHPDILHQHKQLTKLSVITD 178 Query: 181 MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYS 240 + E +L + + S YL+R Q+Y G + IR +QL T+ + Sbjct: 179 YMKEHYKEELSLSKLAEIFGYSPSYLSRMFQKYAGINYKDYMQAIRTEHGYRQLVETDMT 238 Query: 241 VTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 ++DI+ E G+ + F K F K P +RK+ Sbjct: 239 ISDISMENGFPNNKAFSKAFYKKYGIMPAEFRKRQK 274 >UniRef50_C0EAY1 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EAY1_9CLOT Length = 329 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 53/280 (18%), Positives = 100/280 (35%), Gaps = 24/280 (8%) Query: 21 NGKNFHVFIY--NKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGS 78 G +F + I+ H HD +E V G E+ R L +GD + + Sbjct: 51 PGSSFRISIHFDPPGFKHQAFHNHDCFEMIYVYQGELENEMPANRCTLHQGDILLLNPNV 110 Query: 79 HHQSFYEFGATRILNVGISKRFFEQHYLPLLPYC-----FVASQVYRTNNAFLTY----- 128 H + N+ I K F+ + +L F + +YR + Sbjct: 111 WHNVYRNDEKDIAFNIAIPKELFQTYLSNILEDNQMFSFFFSDYLYRDPKSERYLYFQNS 170 Query: 129 --------VETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEK 180 VE ++ ++ + ++L +E+ + ++ + Sbjct: 171 GDPWVREPVERMVREYFSKQPNWNSMTLACLIALFSQLSRTHQEESKIAAYENDRNRIVY 230 Query: 181 ---MHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMT 237 + + L M S +L++ ++ GK Q++ E R+N A LE T Sbjct: 231 EMVAYVNAHMQDVTLNQMAEHLKYSPGHLSKLLRKS-GKNFSQLLLECRMNKAGYYLEHT 289 Query: 238 NYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 N +++I GY++ F K F++ TP YRK + Sbjct: 290 NLPISEIIERIGYTNEFHFYKLFRQSFHTTPTEYRKSVRS 329 >UniRef50_C2KAS7 Transcriptional regulator n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C2KAS7_9FLAO Length = 311 Score = 184 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 45/267 (16%), Positives = 91/267 (34%), Gaps = 14/267 (5%) Query: 28 FIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFG 87 F+ N+ H H E V G ++I GD V I H Sbjct: 45 FLTNENIKSHVWHYHPEVELIFVCKGSGKRQIGSSITYFSEGDLVLIGSNLPHCGLTNES 104 Query: 88 --ATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAF---LTYVETVISSLNLRETG 142 + + F + + +++ + ++ + + + Sbjct: 105 THNEYEMVIQFKPDFLGEPIWDIPEMQRISALLEKSKAGIVFGEEVKKRIGKEITEMHET 164 Query: 143 LEEFVEMVTFYVINRLRHYREEQVIDDVPQWL---------KSTVEKMHDKEQFSESALE 193 +++ L ++ ++++ +L + + LE Sbjct: 165 SSLDKLCRFLKILDELSVTQDYRILNAGKYYLQTQVEDNERINLIFNYVKDHFKEAITLE 224 Query: 194 NMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSP 253 + L+ R ++ KT Q +NE RI A K L S+T++ FE+G+++ Sbjct: 225 EVADLANMKVPSFCRYFKKITNKTFTQFVNEYRITHALKLLAEQPLSITEVCFESGFNNF 284 Query: 254 SLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 S F +TFK+ +P YRK+ F + Sbjct: 285 SYFNRTFKEYIQKSPSQYRKEFNYFME 311 >UniRef50_D1PQS2 Transcriptional regulator, AraC family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQS2_9FIRM Length = 291 Score = 184 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 44/260 (16%), Positives = 91/260 (35%), Gaps = 16/260 (6%) Query: 29 IYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGA 88 +N + LH H E + Y + + + L+ D +FI G H Sbjct: 23 YHNNSAEDFPLHWHVPGEIICPIQNTYNVTVADEILYLKPHDILFIGSGELHSITAPKEG 82 Query: 89 TRILNVGISKRFFEQHYLPLLPYCFVASQV---YRTNNAFLTYVETVISSLNLRETG--- 142 R + + S FEQ + L + + Y+ F + +++ + G Sbjct: 83 ERYI-LNFSTAMFEQFHELALFFAALHPFRLLRYQDQPQFNDQLLALMTRMEKEYFGAAV 141 Query: 143 -LEEFVEMVTFYVINRLRHYREEQVI--------DDVPQWLKSTVEKMHDKEQFSESALE 193 + + + + + + Q S + + + +L+ Sbjct: 142 FRDCELSSLMLHFFAVIGRKLHQNAPHENISPLRQKEQQERFSMLCNYINAHCTEDLSLD 201 Query: 194 NMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSP 253 + + S+ + R + G T + R+ FAK L + +T++A +G++S Sbjct: 202 ELANEAGFSKYHFARLFKEITGTTCHNYLLGRRLLFAKTLLADFSLPITEVAMRSGFNSL 261 Query: 254 SLFIKTFKKLTSFTPKSYRK 273 + F + FK TP +RK Sbjct: 262 ATFNRIFKFQIGCTPSEFRK 281 >UniRef50_C9LCE8 Transcriptional regulator, AraC family n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LCE8_RUMHA Length = 287 Score = 184 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 53/282 (18%), Positives = 105/282 (37%), Gaps = 18/282 (6%) Query: 9 PEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLER 68 E+ E L N + + +TE H HD+ EF +++ G+ I+GK +E Sbjct: 3 KEMYDITEGDL-NPEFLFTCVSTRTEEEQNYHAHDFIEFAVIMGGKGKFYIDGKDYEVEE 61 Query: 69 GDFVFIPLGSHHQSF--YEFGATRILNVGISKRFF----EQHYLPLLPYCFVASQVYRTN 122 GDF+ + G++H+S Y + + S F ++ + R Sbjct: 62 GDFILLNPGTYHRSKAGYSKEGLKECYIAFSGVSFKGCKSGYFPSFKGNGKIIKMADRMK 121 Query: 123 NAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQV----------IDDVPQ 172 + G ++ ++ + ++E+ + Sbjct: 122 KNIFQICTVMNKEARECSAGRYFMLKAYLIQILCLVVREQKEEKQEGEGKGYIFQSTGKK 181 Query: 173 WLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKK 232 ++ + K ++ + +LE + A S Y+ + + G TP+ + +R+ AK+ Sbjct: 182 YVVQQIMKYMEENYREKISLEQIAANMYLSSFYIAKIFKSETGDTPINYLIRLRMEKAKE 241 Query: 233 QL-EMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK 273 L + ++A GYS F K FKK +P Y+K Sbjct: 242 ILEISPEEPIKEVAAAVGYSDAYHFSKLFKKHYGISPLYYKK 283 >UniRef50_A8SUZ2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8SUZ2_9FIRM Length = 298 Score = 184 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 44/278 (15%), Positives = 96/278 (34%), Gaps = 21/278 (7%) Query: 23 KNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQS 82 + F H H + E ++ G+ + E + +LE GD + H Sbjct: 16 EAFLFDAQTSEMFPILPHWHYFVEILYMVEGKAYVEAGEENYVLEPGDLIVFYPQMAHAI 75 Query: 83 FYEFG-ATRILNVGISKRFFEQHYLPLLPYCFV-------------ASQVYRTNNAFLTY 128 + R + L + S+ Sbjct: 76 YSTGQLPIRYYVLKFDPAHLNISGSALPSISSLIAMAAVEQKLSVYFSKEKFNQEKMKQL 135 Query: 129 VETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKS-------TVEKM 181 ++ + +L ++ G + + ++ + +++ + ++ V + Sbjct: 136 IQGSVKALEEKQFGYDIIMHSNYCLLMAEILRIWKQEGFQIKKRKKETVLSEKFTEVSEY 195 Query: 182 HDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSV 241 + + ++ + S Y + YYG+T ++I +R+ A+ L+ T++ + Sbjct: 196 ISQHYQEDLSVAELAEKFHMSYSYFAAIFKEYYGQTCKEMILTVRLQKAEDLLQFTDFDL 255 Query: 242 TDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFN 279 T I+ E G+ S FIK FK+ TP+ YR K F+ Sbjct: 256 TYISQETGFCDCSHFIKAFKQKYGVTPRKYRMKEKSFD 293 >UniRef50_A8S1Q1 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8S1Q1_9CLOT Length = 322 Score = 184 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 55/262 (20%), Positives = 93/262 (35%), Gaps = 24/262 (9%) Query: 36 ISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVG 95 H H+Y E + G ++G+ + L+ G+ +F+ + + +N Sbjct: 61 HFPEHTHNYVEVIYMCRGETTHVVDGRELKLKEGELLFLNQHAVQEIQPAGQDDIAVNFI 120 Query: 96 ISKRFF----------EQHYLPLLPYCFVASQVYRTNNAFL--------TYVETVISSLN 137 I FF E + C Y F VE ++ SL Sbjct: 121 ILPEFFDTAFRMMGEEENLLRDFIVGCLCDDTRYGRYLHFQIADVLPVQNLVENLVWSLM 180 Query: 138 LRETGLEEFVEMVTFYVINRLRHYR-----EEQVIDDVPQWLKSTVEKMHDKEQFSESAL 192 G++ + ++ L HY Q L V + D+ +L Sbjct: 181 HEREGMQAMNQTTMGLLLRHLMHYTGRIRVNRDSEQSFEQQLTLQVLRYIDEHYRE-GSL 239 Query: 193 ENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSS 252 + AL +L+RA R G+ +++ R+N A L T V D++F GY + Sbjct: 240 TELAALMGYDVYWLSRAINRLLGRNYKELLQIKRLNQAAFLLHSTRMPVADVSFAVGYDN 299 Query: 253 PSLFIKTFKKLTSFTPKSYRKK 274 S F + F+ +PK YRK Sbjct: 300 TSYFYRIFRTYYGMSPKEYRKN 321 >UniRef50_C7GHR9 Transcriptional regulator, AraC family n=2 Tax=Lachnospiraceae RepID=C7GHR9_9FIRM Length = 273 Score = 184 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 97/252 (38%), Gaps = 6/252 (2%) Query: 32 KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH-QSFYEFGATR 90 K H H+ E V G + + ++ GDF + H + + Sbjct: 17 KKTVHFPPHLHEAIEVVYVTDGDIELGVGQELYHMDEGDFAIVFPNVIHHYQVFGKKENK 76 Query: 91 ILNVGISKRFFEQHYLPLLPYCFVAS--QVYRTNNAFLTYVETVISSLNLRETGLEEFVE 148 ++ + + F +Y L Y + + + + ++ + ++ +V+ Sbjct: 77 VIYLYLDPTLFPSYYKELQIYSPKNPVVKKEQVHPDVVNAIKYLAGITEGNPMLIQAYVQ 136 Query: 149 MVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTR 208 M+ +V + + V D L + K + +LE M S+ L+R Sbjct: 137 MILAHVFAEMPMVDKSTVGSDD---LIYNAVEYVAKNFREKISLEKMAYDLCVSKYVLSR 193 Query: 209 ATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTP 268 + + + +N +R+N+A LE T S+T+I + G+ S F + FK TP Sbjct: 194 MFAKTFHCNFSKYVNGVRLNYAVAALENTMDSITNICLDCGFESQRTFNRVFKDRYKITP 253 Query: 269 KSYRKKLTEFNQ 280 + YRK++ N+ Sbjct: 254 REYRKRMEHNNR 265 >UniRef50_A3ZMH3 Activator protein MtlR n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZMH3_9PLAN Length = 294 Score = 184 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 48/289 (16%), Positives = 97/289 (33%), Gaps = 19/289 (6%) Query: 11 IATAREQ-QLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERG 69 + A E+ G +F F + E+ + H+H E T V G + + G Sbjct: 1 MTIAFEKLVPPPGHSFRCFERSALETPAKWHRHPELEITYVPYGTGTRLVGDHVARYSPG 60 Query: 70 DFVFIPLGSHHQSFYEF------GATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNN 123 D V H + + S F + V +++ Sbjct: 61 DLVLSGENLPHTWLSDDFVGKKFDRHIAYVIQFSNDFLGSTFFESPELNDVRLMLHKARR 120 Query: 124 AFL------TYVETVISSLNLRETGLEEFVEMVTFYVINR-----LRHYREEQVIDDVPQ 172 L V ++ + ++ + ++ L D Sbjct: 121 GLLFSPSAVQRVGDIMKLMPEQQGLTQLISLFNCLNLLAEEGGEVLASEGYTPGFDHASD 180 Query: 173 WLKSTVEKMHDKEQFS-ESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAK 231 W ++ E + + + +R +R G+T Q ++E+RI A Sbjct: 181 WRIDKACNYINEHLEDPELSHAAICKEVDMNPSSFSRMFKRATGRTVTQYVSELRIGIAC 240 Query: 232 KQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 + L T S+ D++ ++G+ + S F ++F+K+ TP+ YR E ++ Sbjct: 241 RLLMETGDSILDVSLKSGFDNLSSFNRSFRKIKQMTPREYRSTFLEAHK 289 >UniRef50_C5EG17 Helix-turn-helix domain-containing protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EG17_9FIRM Length = 317 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 43/293 (14%), Positives = 97/293 (33%), Gaps = 21/293 (7%) Query: 6 INAPEIATAREQQLFNGKNFHVFI-----YNKTESISGLHQHDYYEFTLVLTGRYFQEIN 60 + E + + V+I + H H+ E VL+G ++N Sbjct: 1 MQVNVKQDFSEVMDYMIPQYPVYIRSAFLSQYHNYTAVSHWHEDVEIIYVLSGTMQYDVN 60 Query: 61 GKRVLLERGDFVFIPLGSHHQSFYEF-GATRILNVGISKRFF-------EQHYLPLLPYC 112 G+ + L + + + + H + + + I E++ P Sbjct: 61 GENITLYENEGIVVNSRNFHFGYSDKKEECGFICFIIHPSVLSGNPYIRERYVRPFTECQ 120 Query: 113 FVASQVYRTNNAFLTYVETVISS---LNLRETGLEEFVEMVTFYVINRLRHYR-----EE 164 + R + + + V+ + LN + F + L E+ Sbjct: 121 AIPFLHLRPDKKWQNELLEVLWTVFHLNQDAPEFYLLCQEAVFRIFTLLYTNNMELLSEK 180 Query: 165 QVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINE 224 D+ + K L+++ + + ++Y +P+ + Sbjct: 181 SEKADISLIQLRKMVGYIQKHYQDSIMLDDIAKIGEMGKTACCNIFKKYMNTSPIDYVIT 240 Query: 225 IRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTE 277 R+ + L T +T+IA+ +G+ + S + K+F+K TP RK+ + Sbjct: 241 YRLAQSTVLLTETRLPITEIAYGSGFHNASYYTKSFRKQYGKTPGQMRKEYLK 293 >UniRef50_C0EI59 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EI59_9CLOT Length = 325 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 43/285 (15%), Positives = 102/285 (35%), Gaps = 26/285 (9%) Query: 16 EQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIP 75 + F ++F V ++ T + H+H+++E V G ++ + +++GD + Sbjct: 38 YLRAFQNRDFAVSMHTNT-FQNPPHRHEFFELVYVHRGSCTNFVDSAEICMKQGDICLLN 96 Query: 76 LGSHHQSFYEF-GATRILNVGISKRFFEQHYLPLLPY-------------------CFVA 115 + H + I N+ I + ++ + ++ Sbjct: 97 TNAEHTLKLDNIERDTIFNLLIRRSMMDRFDFKVFSSEDFVANFFLKSIQKQREEKNYLL 156 Query: 116 SQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQV----IDDVP 171 ++ + +I + E + + ++ L + ++ Sbjct: 157 FPQSEETAEQISLFQKIIQEFYDDKCYKETKISHLFDCLMIELVRSYKVEIDVRYPGSGE 216 Query: 172 QWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAK 231 S + K E LE++ + L+R ++ G + + +IR+ A Sbjct: 217 NQKFSDLVKYI-GENSDSVTLESLARQFNYHPQSLSRIIKQQTGSSFQKFFTDIRLEQAA 275 Query: 232 KQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 + L ++ V +I + GYS+ + F K F++ +P YRKK Sbjct: 276 RLLCESSEPVAEIIRKVGYSNRTWFNKMFQQKFGVSPGEYRKKAR 320 >UniRef50_A6LWT0 Transcriptional regulator, AraC family n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LWT0_CLOB8 Length = 263 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 54/266 (20%), Positives = 99/266 (37%), Gaps = 10/266 (3%) Query: 11 IATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGD 70 + E +NF H H Y E V+ G IN + L+ G+ Sbjct: 1 MYPFFEANKSGDQNF-FSSKILENFSFPPHLHPYVEIAYVIEGSIEVTINDTQCCLKAGE 59 Query: 71 FVFIPLGSHHQSFYEFGATRILNVGISKR----FFEQHYLPLLPYCFVASQVYRTNNAFL 126 H F G ++I+ S FF L F++ + ++ Sbjct: 60 VSICFPNDIHT-FNSDGFSKIILFIFSPDLTRSFFGIRMDKTLENPFMSKNI--VDDGIS 116 Query: 127 TYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQ 186 + + + + + ++ + + ++ +L + + + K + Sbjct: 117 SLLYMLHDEY--KSVNNKYVIKGLLYTILGKLDSHFTFKKSSTFYNSTMQNLLKYIEIHY 174 Query: 187 FSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAF 246 + +L+++ S+ YL+R G IN +RIN A+K L T+ VT IA Sbjct: 175 HEKISLDSIAKDLGFSKFYLSRIFSNKIGYQFNDYINRLRINKAQKLLSETDLPVTIIAL 234 Query: 247 EAGYSSPSLFIKTFKKLTSFTPKSYR 272 E G+ S F + FK+LT+ TP +R Sbjct: 235 ECGFESQRNFNRIFKELTALTPTKFR 260 >UniRef50_C6I5T7 AraC family transcriptional regulator n=18 Tax=root RepID=C6I5T7_9BACE Length = 297 Score = 184 bits (467), Expect = 3e-45, Method: Composition-based stats. Identities = 48/295 (16%), Positives = 103/295 (34%), Gaps = 20/295 (6%) Query: 6 INAPEIATAREQQLFNGKN-FHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEI-NGKR 63 +NA + RE + K+ F++ KTE +H H +E + I Sbjct: 1 MNALQSNIIREITPLSDKDCFYIAERYKTEFTYPIHNHAEFELNFTEKAAGVRRIVGDSA 60 Query: 64 VLLERGDFVFIPLGSH-HQSFYEF---GATRILNVGISKRFFEQHYLPLLPYCFVASQVY 119 ++ D V I H R + + S F + ++ + + + Sbjct: 61 EVISDYDLVLITGKDLEHVWEQHDCHSKEIREITIQFSSDLFFKSFINKNQFDSIRDMLE 120 Query: 120 RTNNAF------LTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDV--- 170 + + + ++ +L + G ++ +T L + + Sbjct: 121 KAQKGLCFPMSAILKIYPLLDTLASEKQGFYAVIKFLTILYELSLFNEEARTLSSSSFAK 180 Query: 171 -----PQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEI 225 V++ + E L + + + +R + GK I +I Sbjct: 181 IGIHSDSRRVQKVQEYINAHYQEEIRLNQLADMVGMTPVSFSRFFKLRTGKNLSDYIIDI 240 Query: 226 RINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ 280 R+ FA + L + S+ +I +E G+++ S F + FKK +PK +R+ + + Sbjct: 241 RLGFAARLLVDSTMSIAEICYECGFNNLSNFNRIFKKKKECSPKEFRENYRKKKK 295 >UniRef50_Q5WI14 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WI14_BACSK Length = 275 Score = 184 bits (467), Expect = 4e-45, Method: Composition-based stats. Identities = 50/272 (18%), Positives = 92/272 (33%), Gaps = 6/272 (2%) Query: 8 APEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLE 67 ++ E N +F TE + +H H E + G GK L Sbjct: 1 MKKMYEHIEIDRKKLINLFIFQARTTERVIPMHFHSNMELIYCINGSLRVWHEGKVTTLM 60 Query: 68 RGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLT 127 D +FI H + R+L + K FF + + + + T Sbjct: 61 DKDMLFINSNVPHSTQSLTE-NRVLVLYFPKSFFASEQVLIQLNTSEEQLDEQVLSNLRT 119 Query: 128 YVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQV-----IDDVPQWLKSTVEKMH 182 + + + T + + L + + + T+ Sbjct: 120 LLMEIYNLHYSTGTYDYILAQSRIIELKYWLARHFSQTAELSPATSRSDRQKIQTILDFI 179 Query: 183 DKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVT 242 + +L + S+ YL+R Y G+T + + + A L+ TN S+T Sbjct: 180 KEHYTENISLAETARICGYSEAYLSRMFHEYTGQTFTEYKQILCLEKAIDLLDTTNKSLT 239 Query: 243 DIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKK 274 +I++E G+ + F K FK++ TP Y+K Sbjct: 240 EISYETGFPNVKSFRKVFKEVMGKTPYEYKKS 271 >UniRef50_UPI0001C3660E AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C3660E Length = 334 Score = 184 bits (467), Expect = 4e-45, Method: Composition-based stats. Identities = 53/271 (19%), Positives = 97/271 (35%), Gaps = 22/271 (8%) Query: 27 VFIYNKTES-ISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYE 85 + I T H+H+Y E + G I+G+ V+L G+ +F+ + + Sbjct: 63 IRIRPHTRFVHFPKHKHNYIEVIYMCKGETTHVIDGETVVLRTGELLFLNQHATQEILPA 122 Query: 86 FGATRILNVGISKRFFEQHYL------------------PLLPYCFVASQVYRTNNAFLT 127 +N I FF+ + Y Sbjct: 123 GEGDVAVNFIILPEFFDTAFEMMGEEENLLRDFLVGCLCNDTRYASFLHFKVADVLPVQN 182 Query: 128 YVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDV--PQWLKSTVEKMHDKE 185 VE ++ +L + ++ + +L HY ++ Q L V D+ Sbjct: 183 LVENMVWTLLNDQPNKRSINQITMGLLFLQLMHYTDKISHTSEGFDQRLIFQVLGYIDEN 242 Query: 186 QFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIA 245 + L + ++ +L+R +R G+T +++ R+N A L T +V D+A Sbjct: 243 Y-RDGELTELSSMLGYDIYWLSRMVKRLTGRTYKELLQIKRLNQAAFLLLNTRLAVADVA 301 Query: 246 FEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 GY + S F + FK+ +PK YRK Sbjct: 302 LAVGYDNTSYFYRIFKERYQMSPKEYRKNNR 332 >UniRef50_C0EIE9 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIE9_9CLOT Length = 361 Score = 184 bits (467), Expect = 4e-45, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 99/262 (37%), Gaps = 19/262 (7%) Query: 32 KTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRI 91 K+ LH H+++E V +G +G+ L +G H + T + Sbjct: 87 KSHFKEYLHSHEFFELFYVYSGTCHCYFDGREFRLPKGTIWIFNTQCAHNVYLPDDRTNL 146 Query: 92 LNVGISKRFFEQHYLPLLPYC-----FVASQVYRTNNAFLT-------------YVETVI 133 +N+ + K F L ++ F + +Y +++A Y+ +I Sbjct: 147 VNILLRKSTFSAALLGMINDNDLFLSFFLNSIYNSDSAPKQLQFTTEPGGMSEFYIFKII 206 Query: 134 SSLNLRETGLEEFVEMVTFYVINRL-RHYREEQVIDDVPQWLKSTVEKMHDKEQFSESAL 192 + + ++ + ++ L R YRE L + + + + + L Sbjct: 207 EEYAGKSPYSQSIMKHLFCCLLAELTRQYRERADNRGRESGLHISQVISYISDNYRIATL 266 Query: 193 ENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSS 252 ++ + YL++ ++ +T + + ++ A L T + +A GYS Sbjct: 267 QSTAEHFHYNPSYLSKYMLKHTNQTFSEYLTRFKLEKAAHLLTSTALPLERVASLTGYSE 326 Query: 253 PSLFIKTFKKLTSFTPKSYRKK 274 S F K FKK + TP+ YR + Sbjct: 327 RSAFDKAFKKFSGLTPRQYRSQ 348 >UniRef50_C0WDW3 Predicted protein n=2 Tax=Acidaminococcus sp. D21 RepID=C0WDW3_9FIRM Length = 311 Score = 184 bits (467), Expect = 4e-45, Method: Composition-based stats. Identities = 52/282 (18%), Positives = 100/282 (35%), Gaps = 12/282 (4%) Query: 6 INAPEIATAREQQLFNGKNFHVFIY-----NKTESISGLHQHDYYEFTLVLTGRYFQEIN 60 A+E+ ++ + ++ +H H + V G +N Sbjct: 19 YRISTTENAQEEIWYSQNEIPIAMFTQRYQPHLGDHIPIHWHQEMQLLWVYDGTLSYRVN 78 Query: 61 GKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFF-----EQHYLPLLPYCFVA 115 G L+R +FI H S + L + K F Q PL + Sbjct: 79 GMEFPLDRSQLLFINDSILHSSHPITTEVKTLCINFRKDIFPSALWNQFLRPLTENPYCT 138 Query: 116 SQVYRTNNAFLTYVETVISSLNLRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLK 175 ++ N L + I ++ TGL + + + + E + + + Sbjct: 139 YELINLNAQSLEKLGRFIHHVDD-STGLFSVTTFIMEVMEEIMETFEESGEAKNTEERVL 197 Query: 176 -STVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQL 234 + + + + ++ LT Q+Y G P+ +N R++ A+ QL Sbjct: 198 FDGILSFIKDHFSESLTISQLSTAAHLNKNKLTALFQKYTGMPPIHFLNTYRLDEARTQL 257 Query: 235 EMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT 276 + SV++I+ + GY S FI+ F+K TP YR+ + Sbjct: 258 LKSARSVSEISEDVGYGQISHFIQQFRKRYGMTPLQYRRTYS 299 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.314 0.176 0.553 Lambda K H 0.267 0.0540 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,004,230,968 Number of Sequences: 3077464 Number of extensions: 122034509 Number of successful extensions: 398187 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 19740 Number of HSP's successfully gapped in prelim test: 2874 Number of HSP's that attempted gapping in prelim test: 340083 Number of HSP's gapped (non-prelim): 29713 length of query: 280 length of database: 1,040,396,356 effective HSP length: 127 effective length of query: 153 effective length of database: 649,558,428 effective search space: 99382439484 effective search space used: 99382439484 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 93 (40.0 bits)