BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (403 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P75990 Uncharacterized protein ycgF n=51 Tax=Enterobact... 831 0.0 UniRef50_A4WAH8 Diguanylate phosphodiesterase n=4 Tax=Enterobact... 360 7e-98 UniRef50_B5XQZ5 BLUF domain/cyclic diguanylate phosphodiesterase... 324 3e-87 UniRef50_C9Y9E1 Putative uncharacterized protein n=1 Tax=Curviba... 239 2e-61 UniRef50_B4S2Z3 Putative uncharacterized protein n=2 Tax=Alterom... 209 1e-52 UniRef50_C6MYV6 Cyclic-di-GMP regulatory protein n=1 Tax=Legione... 160 6e-38 UniRef50_Q1GFT6 Diguanylate phosphodiesterase n=4 Tax=Proteobact... 144 4e-33 UniRef50_A1WBD2 Diguanylate phosphodiesterase n=2 Tax=Proteobact... 131 6e-29 UniRef50_A1TM11 Diguanylate phosphodiesterase n=82 Tax=Bacteria ... 129 2e-28 UniRef50_A1SZ76 Regulatory protein for cyclic-di-GMP, EAL domain... 128 3e-28 UniRef50_D0KZ53 Diguanylate phosphodiesterase n=1 Tax=Halothioba... 127 9e-28 UniRef50_D2U9N8 Putative diguanylate phosphodiesterase protein n... 125 3e-27 UniRef50_B2T334 Diguanylate phosphodiesterase n=1 Tax=Burkholder... 124 5e-27 UniRef50_Q31JP8 Diguanylate phosphodiesterase (EAL domain) n=3 T... 124 5e-27 UniRef50_Q48BZ0 EAL domain protein n=5 Tax=Pseudomonas syringae ... 122 2e-26 UniRef50_A3UF66 Putative phosphodiesterase n=1 Tax=Oceanicaulis ... 120 8e-26 UniRef50_B0SAD5 Signal transduction protein n=6 Tax=Bacteria Rep... 117 6e-25 UniRef50_Q1QTN2 Diguanylate phosphodiesterase n=1 Tax=Chromohalo... 115 4e-24 UniRef50_C7QPU5 Diguanylate phosphodiesterase n=2 Tax=Cyanothece... 113 1e-23 UniRef50_A8IAH0 EAL domain protein n=1 Tax=Azorhizobium caulinod... 107 8e-22 UniRef50_A6VWJ7 Diguanylate phosphodiesterase n=1 Tax=Marinomona... 104 6e-21 UniRef50_C8WEW1 Diguanylate phosphodiesterase n=3 Tax=Zymomonas ... 104 6e-21 UniRef50_Q5ZZ55 Signal transduction protein (EAL/GGDEF domain pr... 103 1e-20 UniRef50_B8GMG6 Diguanylate phosphodiesterase n=1 Tax=Thioalkali... 103 1e-20 UniRef50_C9P5U0 EAL domain protein n=2 Tax=Gammaproteobacteria R... 102 4e-20 UniRef50_B8H3W1 EAL-domain diguanylate phosphodiesterase n=2 Tax... 101 5e-20 UniRef50_B0TE28 Eal domain protein n=1 Tax=Heliobacterium modest... 101 6e-20 UniRef50_A4XWZ5 Diguanylate phosphodiesterase n=9 Tax=Gammaprote... 101 6e-20 UniRef50_C6HZP9 Diguanylate phosphodiesterase n=1 Tax=Leptospiri... 100 1e-19 UniRef50_A3QA10 Diguanylate cyclase/phosphodiesterase n=17 Tax=S... 100 2e-19 UniRef50_Q313M2 Diguanylate phosphodiesterase (EAL domain) n=1 T... 97 1e-18 UniRef50_A8F6K1 Diguanylate phosphodiesterase n=2 Tax=Thermotoga... 96 2e-18 UniRef50_C8QI00 Diguanylate cyclase/phosphodiesterase with PAS/P... 96 2e-18 UniRef50_A8DWU2 Predicted protein n=1 Tax=Nematostella vectensis... 96 2e-18 UniRef50_C9P447 Putative uncharacterized protein n=1 Tax=Vibrio ... 96 2e-18 UniRef50_D1U592 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 96 3e-18 UniRef50_B9JNG4 Sensory box/GGDEF family protein n=3 Tax=Rhizobi... 95 4e-18 UniRef50_Q2G9C2 Periplasmic sensor diguanylate cyclase/phosphodi... 95 4e-18 UniRef50_C0N2S1 Cyclic diguanylate phosphodiesterase domain prot... 95 6e-18 UniRef50_Q48L91 EAL domain/GGDEF domain protein n=23 Tax=Pseudom... 95 6e-18 UniRef50_C7R7Z7 Diguanylate cyclase/phosphodiesterase with PAS/P... 94 7e-18 UniRef50_B9ZKL4 Diguanylate phosphodiesterase n=1 Tax=Thioalkali... 94 1e-17 UniRef50_A5F7V2 EAL family protein n=27 Tax=Vibrio cholerae RepI... 94 1e-17 UniRef50_O66495 Putative uncharacterized protein n=1 Tax=Aquifex... 93 2e-17 UniRef50_D2LS52 Diguanylate cyclase/phosphodiesterase with PAS/P... 93 2e-17 UniRef50_B5ZF52 Diguanylate phosphodiesterase n=2 Tax=Gluconacet... 93 2e-17 UniRef50_B3X614 Diguanylate phosphodiesterase n=2 Tax=Proteobact... 92 4e-17 UniRef50_A8VV37 Signal transduction protein containing a membran... 91 5e-17 UniRef50_A3JDG5 Putative uncharacterized protein n=1 Tax=Marinob... 91 5e-17 UniRef50_A1SWI5 Regulatory protein for cyclic-di-GMP, EAL domain... 91 6e-17 UniRef50_B1J7P7 Diguanylate cyclase/phosphodiesterase with PAS/P... 91 7e-17 UniRef50_Q0A703 Diguanylate phosphodiesterase n=1 Tax=Alkalilimn... 91 7e-17 UniRef50_B4U8C5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Hy... 91 7e-17 UniRef50_C6W8B9 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ps... 91 9e-17 UniRef50_Q31EL1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 91 9e-17 UniRef50_C5S6B5 Diguanylate phosphodiesterase n=1 Tax=Allochroma... 91 1e-16 UniRef50_B2V685 Diguanylate cyclase/phosphodiesterase n=3 Tax=Su... 91 1e-16 UniRef50_A5GE54 Diguanylate phosphodiesterase n=2 Tax=Geobacter ... 90 1e-16 UniRef50_Q47CB3 Response regulator receiver modulated diguanylat... 90 1e-16 UniRef50_C4ZM39 Diguanylate cyclase/phosphodiesterase with PAS/P... 90 2e-16 UniRef50_A4SJC3 GGDEF domain protein n=2 Tax=Aeromonas RepID=A4S... 90 2e-16 UniRef50_B9R1X0 Cyclic diguanylate phosphodiesterase domain prot... 90 2e-16 UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromob... 89 2e-16 UniRef50_A8ET21 EAL domain protein n=3 Tax=delta/epsilon subdivi... 89 2e-16 UniRef50_A4BJS0 Predicted signal transduction protein containing... 89 2e-16 UniRef50_B9JAE4 GGDEF family protein n=1 Tax=Agrobacterium radio... 89 2e-16 UniRef50_Q1YXX2 Putative signal transduction protein n=2 Tax=Pho... 89 3e-16 UniRef50_C5BPE5 Thioester reductase n=1 Tax=Teredinibacter turne... 89 3e-16 UniRef50_A8I9U8 Putative signal transduction protein n=1 Tax=Azo... 89 4e-16 UniRef50_B4RW56 Sensory box/GGDEF family protein n=1 Tax=Alterom... 89 4e-16 UniRef50_B5ZQU7 Diguanylate cyclase/phosphodiesterase n=16 Tax=R... 88 4e-16 UniRef50_B8DJX8 Diguanylate cyclase/phosphodiesterase n=5 Tax=De... 88 4e-16 UniRef50_Q0K510 Predicted signal transduction protein containing... 88 4e-16 UniRef50_B9QZL6 Cyclic diguanylate phosphodiesterase domain prot... 88 6e-16 UniRef50_A3UFJ0 Putative uncharacterized protein n=1 Tax=Oceanic... 88 6e-16 UniRef50_B0ML09 Putative uncharacterized protein n=1 Tax=Eubacte... 88 6e-16 UniRef50_A5ETG3 Diguanylate cyclase/phosphodiesterase n=6 Tax=ce... 87 7e-16 UniRef50_Q0G5H0 GGDEF family protein n=1 Tax=Fulvimarina pelagi ... 87 9e-16 UniRef50_C9Q762 Putative uncharacterized protein n=1 Tax=Vibrio ... 87 1e-15 UniRef50_A7GAB5 Multisensor diguanylate cyclase/phophodiesterase... 87 1e-15 UniRef50_Q08UR4 Diguanylate phosphodiesterase n=1 Tax=Stigmatell... 87 1e-15 UniRef50_A1SXC8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ps... 87 1e-15 UniRef50_Q21G77 Diguanylate cyclase/phosphodiesterase with PAS/P... 87 1e-15 UniRef50_Q0C2A3 Putative sensory box-containing diguanylate cycl... 87 1e-15 UniRef50_Q07VI3 Diguanylate cyclase/phosphodiesterase with PAS/P... 87 2e-15 UniRef50_Q2JVC4 EAL domain protein n=1 Tax=Synechococcus sp. JA-... 86 2e-15 UniRef50_B6BNY2 Ggdef domain protein n=2 Tax=Campylobacterales b... 86 2e-15 UniRef50_D1U5S7 Diguanylate cyclase/phosphodiesterase with PAS/P... 86 2e-15 UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candida... 86 2e-15 UniRef50_Q5QW01 Intracellular signaling protein (GAF,PAS,GGDEF,E... 86 2e-15 UniRef50_D0XT35 Diguanylate cyclase/phosphodiesterase n=1 Tax=Br... 86 2e-15 UniRef50_A1WT41 Diguanylate phosphodiesterase n=1 Tax=Halorhodos... 86 2e-15 UniRef50_Q5QVU6 Signaling protein (EAL,CBS,GGDEF domains) n=2 Ta... 86 2e-15 UniRef50_Q47C60 Diguanylate cyclase/phosphodiesterase with PAS/P... 86 2e-15 UniRef50_Q981Y4 Mlr9186 protein n=1 Tax=Mesorhizobium loti RepID... 86 3e-15 UniRef50_C5V2W0 Response regulator receiver modulated diguanylat... 86 3e-15 UniRef50_A4A5P4 Sensory box/GGDEF family protein n=1 Tax=Congreg... 86 3e-15 UniRef50_C8WCF5 Diguanylate cyclase/phosphodiesterase n=4 Tax=Zy... 86 3e-15 UniRef50_A5ERD3 Diguanylate cyclase/phosphodiesterase n=12 Tax=B... 86 3e-15 UniRef50_B8KJL8 Response regulator/sensory box/ggdef domain/eal ... 86 3e-15 UniRef50_B5YH86 EAL domain, putative n=1 Tax=Thermodesulfovibrio... 86 3e-15 UniRef50_B7DP82 Diguanylate phosphodiesterase n=1 Tax=Alicycloba... 86 3e-15 UniRef50_B1Y3M1 Diguanylate cyclase/phosphodiesterase with PAS/P... 86 3e-15 UniRef50_B0TGE2 Signal transduction protein, putative n=2 Tax=He... 86 3e-15 UniRef50_B1M3H8 Diguanylate cyclase/phosphodiesterase with PAS/P... 86 4e-15 UniRef50_Q30QU6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ca... 86 4e-15 UniRef50_C7LSZ0 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 86 4e-15 UniRef50_B6FLB5 Putative uncharacterized protein n=1 Tax=Clostri... 85 4e-15 UniRef50_C1SK80 PAS domain S-box/diguanylate cyclase (GGDEF) dom... 85 4e-15 UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsul... 85 5e-15 UniRef50_A6LXC6 Diguanylate cyclase/phosphodiesterase with PAS/P... 85 5e-15 UniRef50_D0SWD2 Predicted protein n=1 Tax=Acinetobacter lwoffii ... 85 5e-15 UniRef50_B1Z990 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 85 6e-15 UniRef50_C5SQK5 Diguanylate cyclase/phosphodiesterase n=1 Tax=As... 85 6e-15 UniRef50_Q2W8V6 EAL domain n=1 Tax=Magnetospirillum magneticum A... 85 6e-15 UniRef50_A5F7H4 PAS/EAL family protein n=26 Tax=Vibrio cholerae ... 84 7e-15 UniRef50_B8GSM4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 84 7e-15 UniRef50_A8ZZG5 Diguanylate phosphodiesterase n=2 Tax=Desulfobac... 84 8e-15 UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/P... 84 8e-15 UniRef50_A0Y3F7 Response regulator n=1 Tax=Alteromonadales bacte... 84 8e-15 UniRef50_A7IMR4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Xa... 84 8e-15 UniRef50_A6B2C4 Ggdef family protein n=8 Tax=Vibrio RepID=A6B2C4... 84 8e-15 UniRef50_Q1QZ57 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ch... 84 8e-15 UniRef50_C8WZK3 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 84 8e-15 UniRef50_D1C8G6 Diguanylate cyclase/phosphodiesterase with PAS/P... 84 8e-15 UniRef50_B8KPF2 Response regulator receiver modulated diguanylat... 84 9e-15 UniRef50_B8EE65 Response regulator receiver modulated diguanylat... 84 9e-15 UniRef50_A5MZF0 Predicted signal transduction protein n=4 Tax=Cl... 84 9e-15 UniRef50_B9L942 Diguanylate cyclase/phosphodiesterase n=1 Tax=Na... 84 9e-15 UniRef50_A9HX93 PAS:GGDEF n=1 Tax=Roseobacter litoralis Och 149 ... 84 1e-14 UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/P... 84 1e-14 UniRef50_A6W5K6 Diguanylate cyclase/phosphodiesterase with PAS/P... 84 1e-14 UniRef50_A1WC44 Diguanylate cyclase/phosphodiesterase with PAS/P... 84 1e-14 UniRef50_C3MGW2 Putative sensory box/GGDEF family protein n=2 Ta... 84 1e-14 UniRef50_C6XNM0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Hi... 84 1e-14 UniRef50_Q1YMF3 Possible response regulator, EAL, GGDEF domains ... 84 1e-14 UniRef50_Q98BI1 Mll5564 protein n=2 Tax=Mesorhizobium RepID=Q98B... 84 1e-14 UniRef50_Q7W9Y7 Putative membrane protein n=2 Tax=Bordetella Rep... 84 1e-14 UniRef50_Q1N2C7 Signaling repeat/GGDEF domain/EAL domain protein... 84 1e-14 UniRef50_B1LTA1 Diguanylate cyclase/phosphodiesterase with PAS/P... 84 1e-14 UniRef50_Q9ABX9 Uncharacterized signaling protein CC_0091 n=3 Ta... 84 1e-14 UniRef50_B8GLY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 83 1e-14 UniRef50_Q81HZ8 Sensory box/GGDEF family protein n=71 Tax=Bacill... 83 1e-14 UniRef50_UPI0001788A67 diguanylate phosphodiesterase n=1 Tax=Geo... 83 2e-14 UniRef50_C6XPY9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Hi... 83 2e-14 UniRef50_C4XGC1 Response regulator receiver protein n=2 Tax=Desu... 83 2e-14 UniRef50_C8QHT9 Diguanylate phosphodiesterase n=1 Tax=Pantoea sp... 83 2e-14 UniRef50_B5ZS02 Diguanylate cyclase/phosphodiesterase n=19 Tax=R... 83 2e-14 UniRef50_C4ZM30 Diguanylate cyclase/phosphodiesterase with PAS/P... 83 2e-14 UniRef50_A8RML2 Putative uncharacterized protein n=1 Tax=Clostri... 83 2e-14 UniRef50_A5VDE7 Diguanylate cyclase/phosphodiesterase with PAS/P... 83 2e-14 UniRef50_B2UJ08 Diguanylate cyclase/phosphodiesterase n=5 Tax=Ra... 83 2e-14 UniRef50_A4U1P1 Sensory box/GGDEF family protein n=1 Tax=Magneto... 83 2e-14 UniRef50_A4TD28 Diguanylate phosphodiesterase n=1 Tax=Mycobacter... 83 2e-14 UniRef50_A1U2T3 Response regulator receiver modulated diguanylat... 83 2e-14 UniRef50_A5V028 Response regulator receiver modulated diguanylat... 83 2e-14 UniRef50_B9Y8C9 Putative uncharacterized protein n=1 Tax=Holdema... 83 2e-14 UniRef50_B8KB62 Ggdef family protein n=1 Tax=Vibrio parahaemolyt... 83 2e-14 UniRef50_C0D241 Putative uncharacterized protein n=3 Tax=Clostri... 83 2e-14 UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/P... 83 2e-14 UniRef50_Q1JYN5 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 83 2e-14 UniRef50_A4BFV7 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 83 2e-14 UniRef50_C1D1W4 Putative diguanylate-cyclase n=1 Tax=Deinococcus... 83 2e-14 UniRef50_B2IVQ6 Response regulator receiver modulated diguanylat... 83 2e-14 UniRef50_C6NZF1 Diguanylate cyclase/phosphodiesterase with PAS/P... 83 2e-14 UniRef50_A6LW52 Diguanylate cyclase/phosphodiesterase n=8 Tax=Cl... 83 2e-14 UniRef50_A0RLD3 Diguanylate cyclase/phosphodiesterase n=79 Tax=c... 83 2e-14 UniRef50_B9JBA8 Sensory box/GGDEF family protein n=17 Tax=cellul... 83 2e-14 UniRef50_B9MF12 Diguanylate cyclase/phosphodiesterase with PAS/P... 83 2e-14 UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/P... 83 2e-14 UniRef50_C8VYA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 82 2e-14 UniRef50_C4ZNG3 Response regulator receiver modulated diguanylat... 82 2e-14 UniRef50_Q24PY1 Putative uncharacterized protein n=1 Tax=Desulfi... 82 3e-14 UniRef50_B8F9D2 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 82 3e-14 UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/P... 82 3e-14 UniRef50_A4EWF4 Putative uncharacterized protein n=1 Tax=Roseoba... 82 3e-14 UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/P... 82 3e-14 UniRef50_C8WAS4 Diguanylate cyclase/phosphodiesterase n=3 Tax=Zy... 82 3e-14 UniRef50_B5E7Y8 Response regulator receiver modulated diguanylat... 82 3e-14 UniRef50_B6A161 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 82 3e-14 UniRef50_C5D2J8 Diguanylate cyclase/phosphodiesterase with PAS/P... 82 3e-14 UniRef50_C8QYF1 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 82 3e-14 UniRef50_C6XE67 Diguanylate cyclase/phosphodiesterase with PAS/P... 82 3e-14 UniRef50_Q1PWQ6 Putative uncharacterized protein n=1 Tax=Candida... 82 3e-14 UniRef50_C0QTP8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 82 4e-14 UniRef50_A1TLA7 Diguanylate cyclase/phosphodiesterase with PAS/P... 82 4e-14 UniRef50_A0L8L0 Diguanylate cyclase/phosphodiesterase with PAS/P... 82 4e-14 UniRef50_B1QWP0 Sensory box/ggdef family protein n=2 Tax=Clostri... 82 4e-14 UniRef50_C5RNW2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Cl... 82 4e-14 UniRef50_Q2BMC3 Hybrid signal transduction histidine kinase and ... 82 4e-14 UniRef50_C9QEK6 Putative diguanylate phosphodiesterase (EAL doma... 82 4e-14 UniRef50_C6B0E8 Diguanylate cyclase/phosphodiesterase n=9 Tax=Rh... 82 4e-14 UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/P... 82 5e-14 UniRef50_B6QZU6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ps... 82 5e-14 UniRef50_A4C7I2 Signaling protein (EAL,CBS,GGDEF domains) n=2 Ta... 82 5e-14 UniRef50_P73380 Slr2077 protein n=1 Tax=Synechocystis sp. PCC 68... 82 5e-14 UniRef50_C1CZV1 Putative uncharacterized protein n=1 Tax=Deinoco... 82 5e-14 UniRef50_C5SMP6 Diguanylate cyclase/phosphodiesterase with PAS/P... 82 5e-14 UniRef50_B9QV02 Cyclic diguanylate phosphodiesterase domain prot... 82 5e-14 UniRef50_UPI00018509AB hypothetical protein Bcoam_03339 n=1 Tax=... 81 5e-14 UniRef50_Q13MY6 Diguanylate cyclase/phosphodiesterase n=3 Tax=Pr... 81 5e-14 UniRef50_A4W933 Diguanylate cyclase/phosphodiesterase n=3 Tax=En... 81 5e-14 UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/P... 81 5e-14 UniRef50_B7KTV8 Diguanylate cyclase/phosphodiesterase with PAS/P... 81 6e-14 UniRef50_B9R2A8 Cyclic diguanylate phosphodiesterase domain prot... 81 6e-14 UniRef50_B1M823 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 81 6e-14 UniRef50_B5W1G7 Diguanylate cyclase/phosphodiesterase n=3 Tax=Os... 81 7e-14 UniRef50_C0BX39 Putative uncharacterized protein n=1 Tax=Clostri... 81 7e-14 UniRef50_A6LWF3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Cl... 81 7e-14 UniRef50_Q2BLE3 C-di-GMP phosphodiesterase A-related protein n=1... 81 7e-14 UniRef50_B9ZPK3 Diguanylate cyclase/phosphodiesterase with PAS/P... 81 7e-14 UniRef50_B5ZY05 Diguanylate cyclase/phosphodiesterase n=11 Tax=R... 81 7e-14 UniRef50_Q163Y3 GGDEF/EAL domain protein n=2 Tax=Roseobacter Rep... 81 7e-14 UniRef50_C0D0Y7 Putative uncharacterized protein n=2 Tax=Clostri... 81 7e-14 UniRef50_B0CCG3 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 81 7e-14 UniRef50_A8IFX4 Sensory box/GGDEF family protein n=1 Tax=Azorhiz... 81 7e-14 UniRef50_Q2BBK9 Putative uncharacterized protein n=1 Tax=Bacillu... 81 8e-14 UniRef50_C5S5K8 Response regulator receiver modulated diguanylat... 81 8e-14 UniRef50_C8Q5J3 BLUF domain protein n=1 Tax=Pantoea sp. At-9b Re... 81 8e-14 UniRef50_D1U8B8 Diguanylate phosphodiesterase n=1 Tax=Desulfovib... 81 9e-14 UniRef50_A6CJY1 Sensory box/GGDEF family protein n=1 Tax=Bacillu... 81 9e-14 UniRef50_C5BN58 Predicted signal transduction protein, with PAS,... 80 9e-14 UniRef50_B3E3S5 Diguanylate cyclase/phosphodiesterase with PAS/P... 80 9e-14 UniRef50_Q1YLJ5 Possible signaling protein with EAL domain n=2 T... 80 9e-14 UniRef50_A8VRD8 Putative diguanylate phosphodiesterase n=1 Tax=B... 80 9e-14 UniRef50_A4U4R0 Sensory box/GGDEF family protein n=3 Tax=Magneto... 80 9e-14 UniRef50_A5FVT2 Periplasmic sensor diguanylate cyclase/phosphodi... 80 1e-13 UniRef50_A1K5F7 EAL/GGDEF-domain containing signaling protein n=... 80 1e-13 UniRef50_A9C2Q1 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 80 1e-13 UniRef50_C8WTE1 Diguanylate phosphodiesterase n=1 Tax=Alicycloba... 80 1e-13 UniRef50_Q7NPW3 Putative uncharacterized protein n=1 Tax=Chromob... 80 1e-13 UniRef50_Q2W7U0 Predicted signal transduction protein containing... 80 1e-13 UniRef50_Q12T53 Periplasmic sensor diguanylate cyclase/phosphodi... 80 1e-13 UniRef50_B0C4N3 Diguanylate cyclase/phosphodiesterase with EAL d... 80 1e-13 UniRef50_C6RJR5 Two-component response regulator n=4 Tax=Acineto... 80 1e-13 UniRef50_C7LPE1 Response regulator receiver modulated diguanylat... 80 1e-13 UniRef50_B8GL67 Diguanylate cyclase/phosphodiesterase with PAS/P... 80 1e-13 UniRef50_Q3JCS1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ni... 80 1e-13 UniRef50_D2SEK4 Diguanylate cyclase/phosphodiesterase with PAS/P... 80 1e-13 UniRef50_Q2BKT3 Probable signalling protein n=1 Tax=Neptuniibact... 80 1e-13 UniRef50_C8WGK9 Diguanylate cyclase/phosphodiesterase with PAS/P... 80 1e-13 UniRef50_Q46V22 Diguanylate cyclase/phosphodiesterase n=5 Tax=ce... 80 1e-13 UniRef50_C6DZH0 Diguanylate cyclase/phosphodiesterase with PAS/P... 80 2e-13 UniRef50_Q2SFK1 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC ... 80 2e-13 UniRef50_Q2I6K9 Multidomain signal-transduction protein n=1 Tax=... 80 2e-13 UniRef50_A8IKF7 Putative cylclic diguanylate phosphodiesterase n... 80 2e-13 UniRef50_B8K4T2 Sensory box protein/ggdef domain/eal domain n=2 ... 80 2e-13 UniRef50_B6BLQ9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 80 2e-13 UniRef50_C6E7Z7 Diguanylate cyclase/phosphodiesterase with extra... 80 2e-13 UniRef50_C0QHY0 Signal transduction family protein (GGDEF domain... 80 2e-13 >UniRef50_P75990 Uncharacterized protein ycgF n=51 Tax=Enterobacteriaceae RepID=YCGF_ECOLI Length = 403 Score = 831 bits (2146), Expect = 0.0, Method: Compositional matrix adjust. Identities = 403/403 (100%), Positives = 403/403 (100%) Query: 1 MLTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGPEEQVKM 60 MLTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGPEEQVKM Sbjct: 1 MLTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGPEEQVKM 60 Query: 61 IYRAICQDPRHYNIVELLCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKGTSKFQLT 120 IYRAICQDPRHYNIVELLCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKGTSKFQLT Sbjct: 61 IYRAICQDPRHYNIVELLCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKGTSKFQLT 120 Query: 121 YDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPIV 180 YDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPIV Sbjct: 121 YDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPIV 180 Query: 181 DPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTADLKSKALAFTMAHALELGDKMIS 240 DPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTADLKSKALAFTMAHALELGDKMIS Sbjct: 181 DPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTADLKSKALAFTMAHALELGDKMIS 240 Query: 241 INLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGI 300 INLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGI Sbjct: 241 INLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGI 300 Query: 301 SVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVS 360 SVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVS Sbjct: 301 SVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVS 360 Query: 361 AMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEKK 403 AMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEKK Sbjct: 361 AMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEKK 403 >UniRef50_A4WAH8 Diguanylate phosphodiesterase n=4 Tax=Enterobacteriaceae RepID=A4WAH8_ENT38 Length = 406 Score = 360 bits (923), Expect = 7e-98, Method: Compositional matrix adjust. Identities = 185/409 (45%), Positives = 256/409 (62%), Gaps = 16/409 (3%) Query: 1 MLTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGPEEQVKM 60 MLTTLIYRS + + +V A RN ++TGILLFNG+ F Q+LEG EE V Sbjct: 1 MLTTLIYRSQLNSSCEPFSLTSLVEQAKLRNAGLNITGILLFNGTDFLQILEGTEESVVK 60 Query: 61 IYRAICQDPRHYNIVELLCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKGTSKFQLT 120 ++ I D RH +VELL DY P RRF GM LFDL++ + VL +V LT Sbjct: 61 LFHKIRGDKRHQCVVELLRDYGPRRRFDNVGMVLFDLQVESQKSVLASVLRYSKLDSYLT 120 Query: 121 YDDRALQFFRTFVLATEQSTYFEIPAEDSWLF------IADGSDKELDS--CALSPTIND 172 DDR +F RTF+ ++S ++ ++W DG + + + C Sbjct: 121 SDDRVFKFIRTFITQGKKSGSRKVYCPNNWKLEREHAPFGDGVEGLISNQIC-------- 172 Query: 173 HFAFHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTADLKSKALAFTMAHAL 232 FAF PIVDP +I + EA+++ N+ IY DL++KA AF +A + Sbjct: 173 QFAFQPIVDPSEGKITSLEALIRGNDGGSPEHFFNALDPDRIYEIDLQTKAYAFALADKI 232 Query: 233 ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAI 292 +GD I+INLLPM+LVN P AV FL+ I + L+PEQ++VE TE+E+IS F++F AI Sbjct: 233 GIGDHKIAINLLPMSLVNVPGAVEFLVESIAKHHLLPEQVVVEVTENEMISGFNQFNSAI 292 Query: 293 KSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCC 352 K L+AAGI +AID FG+G+AGL LL++FQPD+IKI +E+ITN+H+SGP+QAI+++II CC Sbjct: 293 KQLRAAGIGLAIDDFGSGYAGLSLLTKFQPDKIKIDREIITNIHRSGPKQAIVKSIISCC 352 Query: 353 TSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPE 401 T +EI + A G+ +EW WLESAGI+ FQG LFA+ +LNG+ I WP+ Sbjct: 353 TDMEITLVAEGIEQIDEWCWLESAGIKRFQGFLFARPQLNGVGDIYWPQ 401 >UniRef50_B5XQZ5 BLUF domain/cyclic diguanylate phosphodiesterase n=7 Tax=Gammaproteobacteria RepID=B5XQZ5_KLEP3 Length = 405 Score = 324 bits (831), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 171/408 (41%), Positives = 249/408 (61%), Gaps = 19/408 (4%) Query: 1 MLTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGPEEQVKM 60 MLTTLIYRS + P+ ++ ++ A+ +NM +TGILLFNG FFQ+LEG EE ++ Sbjct: 1 MLTTLIYRSQVDPARPLTDLDALIHRASGKNMPLGITGILLFNGQQFFQVLEGNEEILES 60 Query: 61 IYRAICQDPRHYNIVELLCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKGTSKFQLT 120 ++ I DPRH ++VEL+ DY+ RRF GM + DLR HE + ++ + T Sbjct: 61 LFSKIQFDPRHRDVVELMRDYSAYRRFRDVGMRMLDLRYHENNAAVEEILRFSTFGETEP 120 Query: 121 YDDRALQFFRTFVLATEQSTYFEIPAEDSWLF---IADGSDKELDSCALSPTINDHFAFH 177 +DR + F+ + E W + + S + L P FA Sbjct: 121 VNDRMFRLISAFIADGGRYCLPESLQPSRWSMTPAVGNASPRNLTD---QPC---QFALQ 174 Query: 178 PIVDPLSRRIIAFEAIVQK-NEDSP----SAIAVGQRKDGEIYTADLKSKALAFTMAHAL 232 IV+P RR+ +FEA+++ SP +AIA R Y DL+SKA AF++A L Sbjct: 175 AIVEPAKRRVSSFEALIRSPTGGSPVEMFAAIAAEDR-----YRFDLESKAFAFSLAARL 229 Query: 233 ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAI 292 LG + +++NLLP +L N PDAV +L++ + A L PEQ+++E TE+EVIS FD+F + + Sbjct: 230 PLGKQQLAVNLLPGSLYNHPDAVGWLMDNLLAAGLRPEQVLIEVTETEVISCFDQFRKVL 289 Query: 293 KSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCC 352 K+L+ AG+ +AID FGAG++GL LL+RFQPD+IK+ EL+ ++H SG +QAI+ ++++CC Sbjct: 290 KALRVAGMKLAIDDFGAGYSGLSLLTRFQPDKIKVDAELVRDIHISGTKQAIVASVVRCC 349 Query: 353 TSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWP 400 L I V A GV T EEW WL+S GI +FQG LF++ LNGI I WP Sbjct: 350 EDLGITVVAEGVETIEEWCWLQSVGIRLFQGFLFSRPCLNGIGEICWP 397 >UniRef50_C9Y9E1 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9E1_9BURK Length = 425 Score = 239 bits (609), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 153/418 (36%), Positives = 234/418 (55%), Gaps = 27/418 (6%) Query: 1 MLTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGPEEQVKM 60 ML+ LIY S + + ++ + S A R N++ DV+G+L+++ F Q++EG ++ + Sbjct: 14 MLSQLIYTSQAQPGITPEMLQAIASTAARDNVRMDVSGLLIYDQGCFLQVMEGEDDVLIA 73 Query: 61 IYRAICQDPRHYNIVELLCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKGTSKFQLT 120 +Y+ + DPRH N+V+L+ + RRF + M L RL V + +G S + Sbjct: 74 LYQRLKSDPRHSNLVKLIHEPIAQRRFAQWSMGLAVPRL----GVQAELGLEGFSTWSEL 129 Query: 121 YDDRALQFF-----RTFVLATEQSTYFE----IPAEDSWLFIADGSDKEL--DSCALS-- 167 RALQ RT + A Q + + A D + G D EL LS Sbjct: 130 LSSRALQNLTEDRVRTVLDAFTQGRWHHAVAPLAAHDG--HTSAGRDPELLIPGSTLSAV 187 Query: 168 -----PTINDHFAFHPIVDPLSRRIIAFEAIVQKNE-DSPSAIAVGQRKDGEIYTADLKS 221 P + FA+ PIVD +RRI ++EA+++ +SP A+ D ++ DL S Sbjct: 188 QRQALPHVGPRFAYQPIVDFENRRISSYEALLRGPAGESPQAVLSAFEGDA-LHRFDLTS 246 Query: 222 KALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEV 281 K A ++A L D +S+NLLP +L+ + AV FL+ + P++I++E TE E Sbjct: 247 KVAALSIAQQLGT-DARLSLNLLPESLLVDAHAVDFLVQAAARHGFTPDRIVLEVTEEEA 305 Query: 282 ISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPR 341 I+ D FA+A+K +++AG+ VAID FGAGFAGL LL+ FQPD++KI + ++ NVH+SGPR Sbjct: 306 ITDPDMFADAVKRVRSAGMRVAIDDFGAGFAGLSLLADFQPDKLKIDRCIVQNVHESGPR 365 Query: 342 QAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAW 399 QAI++AI++ C L I V A GV T EE+ WL AG+ QG L A+ L +P + W Sbjct: 366 QAIVRAIVEFCYCLGIAVVAEGVETVEEFNWLRHAGVNRIQGYLIARPGLCALPPVEW 423 >UniRef50_B4S2Z3 Putative uncharacterized protein n=2 Tax=Alteromonas macleodii RepID=B4S2Z3_ALTMD Length = 390 Score = 209 bits (532), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 136/413 (32%), Positives = 214/413 (51%), Gaps = 43/413 (10%) Query: 1 MLTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGPEEQVKM 60 ML L+YRS + + + +++S + N + +TGILLF+G +FFQ+LEG E+V+ Sbjct: 1 MLKQLVYRSKATEKFSEEDLSKIMSDSLPYNEPNGITGILLFDGEYFFQVLEGESEKVEA 60 Query: 61 IYRAICQDPRHYNIVELLCDYAPARRFG---------KAGMELF----DLRLHERDDV-- 105 +Y I +D RH IV++ R FG G + DL L+ + Sbjct: 61 LYEHIKKDRRHSAIVKVTEIVIHERNFGAWLLRTLLVNQGSRCYWLPTDLNLNRESRIFA 120 Query: 106 LQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCA 165 L F G + L+ DDR + V A + E+S Sbjct: 121 LLNSFASGKWRNCLSDDDRKKINAKVAVKAASVDAF-----ENS---------------- 159 Query: 166 LSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-PSAIAVGQRKDGEIYTADLKSKAL 224 N FAF PIVD R+ EA+++ ++ P AI D E Y DL+SKA+ Sbjct: 160 -----NIQFAFQPIVDTFKGRVSTIEALIRSDDGRYPEAILDSLHGD-EKYKFDLESKAI 213 Query: 225 AFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISR 284 A L + +S+NL P + + P+ +L + + + L P+Q+++E TE+E+IS Sbjct: 214 AIAQGAKLLNPSQSLSVNLCPGAITHMPNVADYLCSLLNQHKLKPKQLVLEVTETEIISE 273 Query: 285 FDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAI 344 F + I +++ GI +AID FGAG+AGL LL+ F PD IK+ +++ T +H+ G RQAI Sbjct: 274 SAAFYDVIARIRSRGIQIAIDDFGAGYAGLSLLADFSPDIIKLDRKITTGIHEDGHRQAI 333 Query: 345 IQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSI 397 +A+++ ++ I + GV T EEW+WL+ G++ FQG LFA+ +LNG+ I Sbjct: 334 TEAVLEFGNAMGIPLVVEGVETMEEWLWLQHVGVQRFQGFLFARPRLNGLSEI 386 >UniRef50_C6MYV6 Cyclic-di-GMP regulatory protein n=1 Tax=Legionella drancourtii LLAP12 RepID=C6MYV6_9GAMM Length = 234 Score = 160 bits (406), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 90/227 (39%), Positives = 132/227 (58%), Gaps = 1/227 (0%) Query: 175 AFHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTADLKSKALAFTMAHALEL 234 AF PIVD ++ ++EA+V+ + ++ Q ++ D ++K +A +A L++ Sbjct: 6 AFQPIVDVNENKVFSYEALVRGKNNESASYVFSQIPKEDLLIFDQQAKKVAIALAAKLKI 65 Query: 235 GDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKS 294 G I++N LP TL + +S +L + + L QIIVE TE EVIS F+ I Sbjct: 66 G-CYINLNFLPCTLQSTGSYISEILEFAEQHHLARNQIIVEVTEEEVISDPQNFSRFINK 124 Query: 295 LKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTS 354 +A GI VAID FGAG+AGL LL F PD IK+ LI N+H G QAI++AI++ C Sbjct: 125 YRAMGIKVAIDDFGAGYAGLNLLVDFLPDIIKLDINLIRNIHNHGSLQAIVKAILQICID 184 Query: 355 LEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPE 401 L I V A G+ T +E+ WL+S I+ FQG LFAK +P + +P+ Sbjct: 185 LGIDVIAEGIETLDEYYWLKSHNIKFFQGFLFAKPGFESLPLVFYPD 231 >UniRef50_Q1GFT6 Diguanylate phosphodiesterase n=4 Tax=Proteobacteria RepID=Q1GFT6_SILST Length = 291 Score = 144 bits (364), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 83/230 (36%), Positives = 122/230 (53%), Gaps = 3/230 (1%) Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTADLKSKALAFTMAHALE 233 AFHPIV S ++ A+EA+V+ + S +A Q D +Y D K + A A L+ Sbjct: 52 MAFHPIVSVGSGKVFAYEALVRGQDGSGAAQVFEQVNDDNLYAFDQKCRKTAIEHASRLD 111 Query: 234 LGD--KMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEA 291 LGD ++SIN LP + + + L K QI+ EFTE E IS + Sbjct: 112 LGDTGSLLSINFLPNAVYDPKACIRLTLETAKKTGFPVSQIMFEFTEVERISA-PHLLDI 170 Query: 292 IKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKC 351 + + + G +ID FGAG+AGL LLSRFQPD +K+ EL N+ +S +Q I++ +I Sbjct: 171 LSTYRRLGFLTSIDDFGAGYAGLDLLSRFQPDVVKLDAELTRNIDQSSVKQTIVRHVISM 230 Query: 352 CTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPE 401 L I + A G+ T E+ L G+++ QG LFAK +P + WP+ Sbjct: 231 LEQLGIIIVAEGIETQGEFSCLYDLGVDLMQGWLFAKPGFETLPDVRWPD 280 >UniRef50_A1WBD2 Diguanylate phosphodiesterase n=2 Tax=Proteobacteria RepID=A1WBD2_ACISJ Length = 254 Score = 131 bits (329), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 77/239 (32%), Positives = 122/239 (51%), Gaps = 3/239 (1%) Query: 163 SCALSPTINDHF--AFHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTADLK 220 C P ++ F AF PIVD S+ + A+EA+V+ + S ++ + Q D Y D Sbjct: 14 GCQDRPPLDLAFSMAFQPIVDVRSQAVFAYEALVRGLDGSSASQILSQVNDDNRYQFDQA 73 Query: 221 SKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESE 280 + A ++A L + +SIN LP + + L + + ++I E TE+E Sbjct: 74 CRVKAVSLAARLGIACH-VSINFLPNAVYEPAACIRTTLEAAQQHQFPTSRLIFEITENE 132 Query: 281 VISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGP 340 + + ++ + G AID FGAG++GL LL+ FQPD IK+ EL+ ++ + Sbjct: 133 RVVDKEHLKSIVQEYRRRGFKTAIDDFGAGYSGLNLLAEFQPDIIKLDMELVRHIDSNPV 192 Query: 341 RQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAW 399 R+AI+Q I+ C +L I V A GV E+ L + G+ FQG LFAK +P + W Sbjct: 193 RRAIVQGILGVCQALSIDVIAEGVEDEAEYRTLRALGVHYFQGYLFAKPAFEQLPEVDW 251 >UniRef50_A1TM11 Diguanylate phosphodiesterase n=82 Tax=Bacteria RepID=A1TM11_ACIAC Length = 332 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 76/229 (33%), Positives = 116/229 (50%), Gaps = 2/229 (0%) Query: 174 FAFHPIVD-PLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTADLKSKALAFTMAHAL 232 AF PIVD + A+EA+V+ + SP+A + + DG Y D + A +A L Sbjct: 55 MAFQPIVDLRHGGSVFAYEALVRGTDGSPAASVLARVNDGNRYAFDQACRVRAVELAARL 114 Query: 233 ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAI 292 + D +SIN LP + + L + E+II E E E + + Sbjct: 115 GI-DCRLSINFLPNAVYQPEACIRVTLEAARRCGFPVERIIFEVAEHENAHDREHLNRIL 173 Query: 293 KSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCC 352 ++ + G+ AID FGAG+AGL LL+ FQPD +KI L+ + RQAI + ++ Sbjct: 174 RAYRRQGLRTAIDDFGAGYAGLGLLADFQPDMLKIDMALVRGIGADPVRQAIARGVVSMG 233 Query: 353 TSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPE 401 +L I V A GV T +E L + G+ ++QG LFA+ L +P + WP+ Sbjct: 234 EALGIAVIAEGVETEDELRPLRAMGVHLYQGYLFARPALEALPDVQWPQ 282 >UniRef50_A1SZ76 Regulatory protein for cyclic-di-GMP, EAL domain n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SZ76_PSYIN Length = 239 Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 73/231 (31%), Positives = 124/231 (53%), Gaps = 14/231 (6%) Query: 175 AFHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTADLKSKALAFTMAHALEL 234 AF PI++ + +++++E +++ + P Q + D ++ A A L L Sbjct: 10 AFQPIINIDAGKVVSYEVLLRGKHNEPPGFIFDQVPTESLMEFDQANRERAIKQASNLGL 69 Query: 235 GDKMISINLLPMTL-------VNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDE 287 + +++N P ++ V E AVS + + + +Q+++E TE E I+ E Sbjct: 70 -ECSLNLNFTPGSILFEGGKYVEETIAVS------QYHGIDAKQLVIEMTECEAINTASE 122 Query: 288 FAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQA 347 + + L+ G+++A+D FG+G+AGL LL QPD IK+ L+ N+ K+GPRQAI++A Sbjct: 123 LSNVLNKLRRTGVTIALDDFGSGYAGLNLLVDVQPDLIKLDMYLLRNIDKNGPRQAIVRA 182 Query: 348 IIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIA 398 I C L I V A GV T EE+ +L G+ ++QG LFAK P ++ Sbjct: 183 IFDVCLDLGIDVLAEGVETEEEFDFLNKLGVSLYQGYLFAKPGFESFPPVS 233 >UniRef50_D0KZ53 Diguanylate phosphodiesterase n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KZ53_HALNC Length = 262 Score = 127 bits (318), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 71/230 (30%), Positives = 115/230 (50%), Gaps = 4/230 (1%) Query: 175 AFHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTADLKSKALAFTMAHALEL 234 AF PIV+ ++RI A+EA+V+ P+ + Q Y D ++ A + L Sbjct: 33 AFQPIVNTATKRIYAYEALVRGRAGEPALSVLSQINTDNRYFFDQAARVTAIRLVSELGF 92 Query: 235 G----DKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAE 290 D +SIN +P + + L + L P+++I E E++ I + Sbjct: 93 ASRDPDTKLSINFMPNAVYRASTCIRATLEAARLYDLDPKRLIFEIAEADQIVDRKHLMD 152 Query: 291 AIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIK 350 I+ + G ++A+D FG G+AGL L +PD IK+ LI N+ RQA+++A + Sbjct: 153 IIEVYRTEGFTIALDDFGEGYAGLNHLIEIRPDVIKLDLNLIRNIDHDAGRQAVVRATVS 212 Query: 351 CCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWP 400 C L I V A GV T EEW LE++G+ ++QG LF++ +P +P Sbjct: 213 MCKELGIGVVAEGVETLEEWSCLEASGVFLYQGYLFSRPAFEALPEPQYP 262 >UniRef50_D2U9N8 Putative diguanylate phosphodiesterase protein n=1 Tax=Xanthomonas albilineans RepID=D2U9N8_XANAL Length = 264 Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 75/225 (33%), Positives = 116/225 (51%), Gaps = 1/225 (0%) Query: 173 HFAFHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTADLKSKALAFTMAHAL 232 H AF PIVD +R I A+EA+V+ + S +A +G+ + +++ D + A A L Sbjct: 29 HMAFQPIVDAATRTIYAYEALVRGEDGSSAAAMLGRVRPEQLHHFDQTCRVQAIATATRL 88 Query: 233 ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAI 292 L ++ SIN +P + + L + + +I E +ESE I+ + + + Sbjct: 89 GLRTRL-SINFIPNAMYEPTTCIRMTLAAAERFGMPISGLIFELSESEYITDLPKVMQIL 147 Query: 293 KSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCC 352 G AID FGAG +GL LL+ FQP IK+ LI + S R+ I+ I++ Sbjct: 148 NRCAEHGFLTAIDDFGAGHSGLNLLADFQPHLIKLDIGLIHGIDTSATRRHIVGGIVQMA 207 Query: 353 TSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSI 397 +L V A GV TP E+ L + GI+++QG LFAK L +P I Sbjct: 208 AALGCTVLAEGVETPAEYHALRTLGIDLYQGYLFAKPALEALPRI 252 >UniRef50_B2T334 Diguanylate phosphodiesterase n=1 Tax=Burkholderia phytofirmans PsJN RepID=B2T334_BURPP Length = 263 Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 80/248 (32%), Positives = 118/248 (47%), Gaps = 6/248 (2%) Query: 155 DGSDKELDSC-----ALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQR 209 DGS+ + C A + FAF PIVD ++ + A EA+V+ + + Q Sbjct: 10 DGSNGQSQKCSGCSDATPLPVEIDFAFQPIVDVSAKAVFACEALVRGAHGESAHSVLSQI 69 Query: 210 KDGEIYTADLKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVP 269 D + Y D + +A A AL L D +SIN +P + + L+ + + Sbjct: 70 DDAKKYQFDQHCRQVAIASAAALGL-DAFLSINFMPNAVYRPEVCIRSTLDAAQKHGFPI 128 Query: 270 EQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQ 329 E+II E E E ++ E + K G AID FGAG++GL LL FQPD IK+ Sbjct: 129 EKIIFETVEGEHLADRSHLVEIFRVYKKFGFLTAIDDFGAGYSGLALLVDFQPDIIKLDM 188 Query: 330 ELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 EL+ + RQ I++ +I C L I+V A G+ T E + + G+ + QG FAK Sbjct: 189 ELLRGIDHDSVRQRIVRGVISICDDLGIRVVAEGIETKGERDFFVAHGVSLMQGYFFAKP 248 Query: 390 KLNGIPSI 397 IP I Sbjct: 249 GFKSIPQI 256 >UniRef50_Q31JP8 Diguanylate phosphodiesterase (EAL domain) n=3 Tax=Gammaproteobacteria RepID=Q31JP8_THICR Length = 255 Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 71/226 (31%), Positives = 116/226 (51%), Gaps = 1/226 (0%) Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTADLKSKALAFTMAHALE 233 FAF PI+ ++ I +EA+V+ E+ + + + D Y D + A +A L+ Sbjct: 27 FAFQPIIHVFNKEIWGYEALVRGLEEKTAWSVLKRVNDDNRYAFDQACRTKAIALASQLK 86 Query: 234 LGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIK 293 L DKM+SIN LP + + L K + E+I+ E TESE + + Sbjct: 87 L-DKMLSINFLPNAVYEPKHCIQSTLKAAKEHQFPLEKIMFEITESEQVVDRAHLTNIFE 145 Query: 294 SLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCT 353 ++ G + A+D FG G AGL +L+ F P+ +KI EL+ NV +S +QAI + +I+ C Sbjct: 146 YYQSQGFTTALDDFGEGHAGLNMLASFVPNILKIDMELVKNVDQSPVKQAITKNLIQMCN 205 Query: 354 SLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAW 399 L + V A G+ EE + + G+ + QG FAK +P++ + Sbjct: 206 DLNVTVLAEGIERIEEVNYFKDLGVPLMQGYFFAKPGFENLPTVNF 251 >UniRef50_Q48BZ0 EAL domain protein n=5 Tax=Pseudomonas syringae group RepID=Q48BZ0_PSE14 Length = 260 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 76/242 (31%), Positives = 118/242 (48%), Gaps = 3/242 (1%) Query: 159 KELDSCALSPTINDHF--AFHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYT 216 K C SP ++ F A+ PIV+ + I A EA+V+ + + Q D Y Sbjct: 13 KGCAGCTGSPELDFSFDYAYQPIVNLHDQSIFAHEALVRGPNGEGAMSVLSQVNDQNRYR 72 Query: 217 ADLKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEF 276 D + A A L + +++ SIN LP + + L + E++I E Sbjct: 73 FDQACRTTAIAGAAKLGMNERL-SINFLPNAVYRPELCIRSTLEAARQRDFPVERLIFET 131 Query: 277 TESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVH 336 ESE + + ++ + G AID FGAG++GL LL+ FQPD IK+ LI ++H Sbjct: 132 IESEHVDNNGHLSNILREYREFGFMTAIDDFGAGYSGLTLLADFQPDLIKLDMNLIRDIH 191 Query: 337 KSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPS 396 + RQAI++ ++ C+ L I++ A G+ EE +L GI + QG LFAK + Sbjct: 192 RDRARQAIVRGVVTMCSDLGIKLIAEGIEQVEERDFLADCGIFLMQGYLFAKPAFKALAQ 251 Query: 397 IA 398 IA Sbjct: 252 IA 253 >UniRef50_A3UF66 Putative phosphodiesterase n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UF66_9RHOB Length = 236 Score = 120 bits (301), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 74/230 (32%), Positives = 117/230 (50%), Gaps = 4/230 (1%) Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTADLKSKALAFTMA-HAL 232 FAF PI+D SR I A EA+V+ E + + + ++ D + A A L Sbjct: 3 FAFQPIIDFKSRTIFAQEALVRGPEGESAGSVLSKVTTENMHAFDRHCRIQALKSASRTL 62 Query: 233 ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAI 292 +++S+N +P + + + L AN +QI+ E TE E ++ D FA + Sbjct: 63 ARRGELLSLNTMPNAVYDPATCLRTTLAAATANGFPIDQIMFEMTEHEAVTDPDHFAMIV 122 Query: 293 KSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCC 352 +S K G + A+D FG+G AGL LL+ PD IK+ L+ NVH S ++ I+ A+++ C Sbjct: 123 RSYKDMGFTTALDDFGSGGAGLTLLASVMPDIIKLDMALVRNVHISPVKRTILSALVEIC 182 Query: 353 TSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPS---IAW 399 I++ A G+ E L GI +FQG F++ +LN P+ I W Sbjct: 183 DKFGIRIIAEGIEVKAEARALLDLGITLFQGYYFSRPQLNDAPTADDINW 232 >UniRef50_B0SAD5 Signal transduction protein n=6 Tax=Bacteria RepID=B0SAD5_LEPBA Length = 268 Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 68/227 (29%), Positives = 113/227 (49%), Gaps = 1/227 (0%) Query: 175 AFHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTADLKSKALAFTMAHALEL 234 AF PI+D ++I + EA+V+ + + + + Y D + A +A+ +++ Sbjct: 40 AFQPIIDWNQKKIYSHEALVRGTKGESAYSILSKVNQNNRYQFDQSCRIKAIQLANQIQI 99 Query: 235 GDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKS 294 +++IN LP + + L + +++ E TE E + + K+ Sbjct: 100 -PALLNINFLPNAVYQPETCIRTTLEASREYQFPLNRLVFELTEGEEVQDHNHIINIFKT 158 Query: 295 LKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTS 354 + G AID FG+G++GL LL++FQPD IK+ ELI N+H + Q + +AI C Sbjct: 159 YQKYGFLTAIDDFGSGYSGLNLLAKFQPDLIKLDMELIRNIHANSVAQKLTKAIAGVCRE 218 Query: 355 LEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPE 401 + IQV A GV T EE L GI ++QG LF+K + +PE Sbjct: 219 IGIQVIAEGVETVEELKVLVDMGIHLYQGYLFSKPAFESAGEVHFPE 265 >UniRef50_Q1QTN2 Diguanylate phosphodiesterase n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QTN2_CHRSD Length = 253 Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 68/226 (30%), Positives = 113/226 (50%), Gaps = 2/226 (0%) Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTADLKSKALAFTMAHALE 233 AF PIVD +++I EA+V+ D + + Q D +Y D + A +A L+ Sbjct: 24 MAFQPIVDVARQQVITHEALVRGLGDESAYGVLSQVSDNLLYRFDQACRVKAIELASGLD 83 Query: 234 LGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIK 293 + + SIN LP + + L+ + E+++ E TE+E ++ I Sbjct: 84 MKSDL-SINFLPNAVYAPEACIQATLDVSRRVGWPTERLVFEITETESVNDRGHLRSIID 142 Query: 294 SLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCT 353 + + G + A+D FG G A L LL+ +PD++KI + L+ H+ RQ +++A+ T Sbjct: 143 TYRQMGFTTALDDFGKGHANLDLLADLRPDKLKIDRALVMGCHQDTRRQILLKAVADIAT 202 Query: 354 SLEIQVSAMGVATPEEWMWL-ESAGIEMFQGDLFAKAKLNGIPSIA 398 LEI + A G+ EE WL E AGI QG +A+ +P++A Sbjct: 203 QLEIDLVAEGIECREEAKWLHEEAGIVQHQGFYYARPAFESMPTVA 248 >UniRef50_C7QPU5 Diguanylate phosphodiesterase n=2 Tax=Cyanothece RepID=C7QPU5_CYAP0 Length = 246 Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 71/235 (30%), Positives = 114/235 (48%), Gaps = 1/235 (0%) Query: 164 CALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTADLKSKA 223 C S + AF PI+D + I ++EA+V+ E + + + + Y+ D + + Sbjct: 9 CHQSLKFSIRMAFQPIIDVQDKVIFSYEALVRGEEGQEANYVLSKVTNDNKYSFDQQCRI 68 Query: 224 LAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVIS 283 A L ++IN LP + ++ +L K + +QII E TE E I+ Sbjct: 69 TAIEAIAKLNRS-ATVNINFLPNAIYEPETCLARVLEVAKTVSFPHDQIIFEVTEHEKIT 127 Query: 284 RFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQA 343 + + G AID FG GFAGL LL+ FQPD +K+ +LI + ++ +QA Sbjct: 128 NHSLLKNIFTTYRRMGFRTAIDDFGEGFAGLNLLADFQPDFLKLDMKLIQGISQNSVKQA 187 Query: 344 IIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIA 398 I+ I L I++ A G+ T +++++L GI QG FAK L +P IA Sbjct: 188 ILSGIQITSEKLGIKLIAEGIETRDDYLFLMDNGIRYMQGYYFAKPALEMLPDIA 242 >UniRef50_A8IAH0 EAL domain protein n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IAH0_AZOC5 Length = 292 Score = 107 bits (267), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 74/255 (29%), Positives = 119/255 (46%), Gaps = 2/255 (0%) Query: 144 IPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDSPSA 203 IP +L +E PT + AF PIVD + +EA+V+ +A Sbjct: 36 IPMGRRYLTKTTSHARETGGHGGQPT-SFTIAFQPIVDVSREHVWGYEALVRGENGESAA 94 Query: 204 IAVGQRKDGEIYTADLKSKALAFTMAHALELGDKM-ISINLLPMTLVNEPDAVSFLLNEI 262 Q ++ + D + A MA L ++ +S+N LP A+ L+ Sbjct: 95 SIFAQVEEPRKHHFDQACRQRAIEMAGRLFPDERTRLSVNFLPDHEQVPKAAMRASLDAA 154 Query: 263 KANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQP 322 L P Q++ EFTE+ A ++ + G+ A+D FG+G++GLL L+ QP Sbjct: 155 SRAGLRPNQLMFEFTETGHFGDLGGTANLVEKYRDLGLLTALDDFGSGYSGLLRLAGLQP 214 Query: 323 DRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQ 382 D +KI L+ N+ RQAI+ A++ +L+I + A GV T EE L GI +FQ Sbjct: 215 DFLKIDMGLVRNISADKRRQAIVAAVVSLARALDIDLIAEGVETREESTALRELGITLFQ 274 Query: 383 GDLFAKAKLNGIPSI 397 G +A+ + +P + Sbjct: 275 GFHYARPTIGTLPPV 289 >UniRef50_A6VWJ7 Diguanylate phosphodiesterase n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VWJ7_MARMS Length = 253 Score = 104 bits (259), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 69/227 (30%), Positives = 106/227 (46%), Gaps = 3/227 (1%) Query: 175 AFHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQR-KDGEIYTADLKSKALAFTMAHALE 233 AF PI++ ++ + A EA+V + + SA V Q + Y D + A +A LE Sbjct: 27 AFQPIINSQTKTVFAQEALV-RGLNQESAFQVFQNVNETNRYRFDQSCRVKAIKLAAELE 85 Query: 234 LGDK-MISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAI 292 + +SIN LP + + LN + E+II EFTE+E I+ I Sbjct: 86 VHKHCFLSINFLPNAVYKPELCIRTTLNAAEEYHFPKEKIIFEFTENEQITDSKHLESII 145 Query: 293 KSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCC 352 + G A D FG+GF GL L+ + D KI LI N+ + RQ I++ ++ Sbjct: 146 LHYQQQGFLTATDDFGSGFNGLNQLADLKTDITKIDMALIKNIDQDKKRQIIVRNLVNLF 205 Query: 353 TSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAW 399 L + + A G+ T E+ L+ GI +FQG FA+ + I W Sbjct: 206 NELNMIIVAEGIETKAEYHVLQDMGIHLFQGYYFARPSFESLAEINW 252 >UniRef50_C8WEW1 Diguanylate phosphodiesterase n=3 Tax=Zymomonas mobilis RepID=C8WEW1_ZYMMN Length = 258 Score = 104 bits (259), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 63/227 (27%), Positives = 110/227 (48%), Gaps = 1/227 (0%) Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTADLKSKALAFTMAHALE 233 FAF PIV+ + I A EA+V+ + + + + + Y+ D K++ A A + Sbjct: 32 FAFQPIVNIKNGHIYAQEALVRGLKGEGAHSILSRIDENNRYSFDQKARDKALQSALSCN 91 Query: 234 LGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIK 293 D ISIN +P + +S L+ + + P ++I E++E E ++ +D I Sbjct: 92 W-DGAISINFMPNAVYYPEYCLSQTLSTCEKLGINPARLIFEWSEKEYLTEYDHIRHVIS 150 Query: 294 SLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCT 353 K VA D FG ++ LL+ + PD IK+ + + + R+A+++A++ C Sbjct: 151 RYKHLNFKVAFDDFGGLYSNFNLLTAYHPDIIKLDRHYVVGIEHDKRRRAVVKAMVGLCR 210 Query: 354 SLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWP 400 L I GV T EE+ L+ G+++ QG L A+ L +P P Sbjct: 211 DLGIDFVVEGVETIEEFKVLQDLGVDLMQGFLLARPALMQMPQATMP 257 >UniRef50_Q5ZZ55 Signal transduction protein (EAL/GGDEF domain protein) n=4 Tax=Legionella pneumophila RepID=Q5ZZ55_LEGPH Length = 386 Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 59/216 (27%), Positives = 112/216 (51%), Gaps = 4/216 (1%) Query: 177 HPIVDPLSRRIIAFEAIVQKNEDS---PSAIAVGQRKDGE-IYTADLKSKALAFTMAHAL 232 PI+ + + FE +++ +D+ PS+ G K + ++ D K++ + Sbjct: 156 QPILHNTTLKPYGFECLLRGKQDNNILPSSDLFGAAKSSDMLFLLDKKARICHIENMSKI 215 Query: 233 ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAI 292 ++ DK I IN P + + ++ +K ++ P QI+ E TES+ + + I Sbjct: 216 DIADKKIFINFNPTAIYDPLFCLTTTNQSLKKTSIKPAQIVFEVTESDEVKDKKHLLKII 275 Query: 293 KSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCC 352 + G VA+D G+G++ L LL+ QPD +K+ QELI+ +H + +Q I++ I + Sbjct: 276 DYYRNQGYCVALDDLGSGYSSLNLLTELQPDYVKLDQELISQIHTNEFKQIILEKICEMA 335 Query: 353 TSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 T L+I++ G+ T +E +++ I+ +QG LF K Sbjct: 336 TKLKIKIICEGIETEDELQIIKNYAIDFYQGFLFEK 371 >UniRef50_B8GMG6 Diguanylate phosphodiesterase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GMG6_THISH Length = 356 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 72/248 (29%), Positives = 109/248 (43%), Gaps = 36/248 (14%) Query: 174 FAFHPIVDPLSR--RIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTAD-----LKSKALAF 226 F F PIV P++ A+EA+++ G KDGE+ D ++ L F Sbjct: 124 FHFQPIV-PINNPGEPFAYEALIR-----------GSMKDGEVVYPDRLFAQARASELTF 171 Query: 227 -------------TMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQII 273 M H L + IN P T+ + + E + P Q + Sbjct: 172 HLDRAARINAIRQAMGHGL---TTAVFINFNPTTIYEPSFCLQTTVKEAEKVGADPNQFV 228 Query: 274 VEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELIT 333 E ESE + I + G VA+D GAG+A L LL++ +PD +K +EL++ Sbjct: 229 FEVVESEHVGDVPHLLRIINYYRDCGFRVALDDLGAGYASLNLLAKLKPDFVKFDRELVS 288 Query: 334 NVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNG 393 +H+ +Q ++ +++ L IQ A GV EEW WL+ G+ QG LFA+ Sbjct: 289 GIHEDSFKQKVLGKLVEMAQDLGIQTIAEGVELVEEWQWLKETGVHFVQGYLFARPA-TP 347 Query: 394 IPSIAWPE 401 P AWPE Sbjct: 348 PPVPAWPE 355 >UniRef50_C9P5U0 EAL domain protein n=2 Tax=Gammaproteobacteria RepID=C9P5U0_VIBME Length = 261 Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 65/221 (29%), Positives = 105/221 (47%), Gaps = 1/221 (0%) Query: 175 AFHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTADLKSKALAFTMAHALEL 234 AF PI+D +R I +EA+V+ ++ + + Q + Y D + A +A L L Sbjct: 29 AFQPIIDVKNRMIFGYEALVRGEQEQSAYSIISQINEHNRYLFDQTCRVKAIQLASQLGL 88 Query: 235 GDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKS 294 D M+SIN LP + + + + +I+ EFTE E ++ Sbjct: 89 -DSMLSINFLPNAIYQPERCLRTTIEAAQRYDFPISRILFEFTEVEKFEDTTHVKRVVEY 147 Query: 295 LKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTS 354 K+ G AID FG+G++GL LL+ FQ + +K+ +LI + RQ+I++ + Sbjct: 148 YKSLGFLTAIDDFGSGYSGLNLLADFQTNIVKLDMQLIRGIDVDLTRQSIVRNCLTMFKD 207 Query: 355 LEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIP 395 L I A GV T E L + G+ + QG +FAK +P Sbjct: 208 LNITPLAEGVETLAELGCLMTLGVPLIQGYVFAKPGFECLP 248 >UniRef50_B8H3W1 EAL-domain diguanylate phosphodiesterase n=2 Tax=Caulobacter vibrioides RepID=B8H3W1_CAUCN Length = 304 Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 5/226 (2%) Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTADLKSKALAFTMAHALE 233 AF PIV S + A EA+ + E + + D Y D + + A +A L+ Sbjct: 55 MAFQPIVKLSSGEVFAHEALARGAEGQGAGTVLSTISDQNRYVFDQQCRVKAIELATTLD 114 Query: 234 L--GDKMISINLLPMTLVNEPDA-VSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAE 290 L G +SIN +P V EP A + L ++I EFTE+E + Sbjct: 115 LPQGGANLSINFMP-NAVYEPRACIRLTLATAMRTGFPLNRLIFEFTENEQLD-IQHVLN 172 Query: 291 AIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIK 350 +++ +A G AID FGAG+AGL L +++QPD +K+ +LI ++ ++ I+ +++ Sbjct: 173 ILRTYRAMGFKTAIDDFGAGYAGLNLFAKYQPDIVKLDMDLIRDIDSDRGKRVIVSNLLR 232 Query: 351 CCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPS 396 T LEI GV T +E L G++ QG + AK G+ + Sbjct: 233 MLTELEIFAVCEGVETMDELSALRDLGVDYVQGYVIAKPVFEGLAA 278 >UniRef50_B0TE28 Eal domain protein n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TE28_HELMI Length = 323 Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 67/237 (28%), Positives = 115/237 (48%), Gaps = 16/237 (6%) Query: 176 FHPIV---DPLSRRIIAFEAIVQKNEDSPSAIAVGQ-----RKDGEIYTADLKSKALAFT 227 F PIV +P R+ A+E +++ + + ++ G+ R ++ D ++ A Sbjct: 92 FQPIVQCDEP--ERLFAYECLLRGKDRNGGILSPGRIFEVARDADLLFQLDRIARITAIE 149 Query: 228 MA--HALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 A H+++ + IN P ++ + + + ++ + PEQ++ E ESE IS Sbjct: 150 EATRHSIQ---STLFINFNPSSVYDPATCLRTTIEAVREAKIQPEQVVFEVVESEQISDA 206 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 + + AG VA+D GAG++ L LL+ +PD +K+ EL+ NV K + I Sbjct: 207 QHLRTILDHYRNAGFQVALDDLGAGYSSLNLLTHLRPDFVKLDMELVRNVDKDAYKGEIT 266 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEK 402 +++ L+I+ A GV PEEW WL+ G + QG LFAK P W +K Sbjct: 267 MKLLELARRLQIKTIAEGVERPEEWRWLKKHGADYVQGYLFAKPACPP-PLPTWSDK 322 >UniRef50_A4XWZ5 Diguanylate phosphodiesterase n=9 Tax=Gammaproteobacteria RepID=A4XWZ5_PSEMY Length = 259 Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 66/221 (29%), Positives = 103/221 (46%), Gaps = 3/221 (1%) Query: 175 AFHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTADLKSKALAFTMAHAL-- 232 AF IVD R A+EA+V+ ++ + +G+ D Y D + A A L Sbjct: 34 AFQLIVDVQENRPFAYEALVRGSQGESAGEVLGRVNDSNRYRFDQACRVKAIEQAATLGL 93 Query: 233 -ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEA 291 ++ D ++SIN LP + + L + E+++ E TE E I + Sbjct: 94 LDIPDCLLSINFLPNAVYRAETCIRATLEAAQRFDFPRERLMFEVTEGEQIHDAEHLKRI 153 Query: 292 IKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKC 351 G + AID FGAG++GL LL+ FQP +K+ L + + RQAI+ I+ Sbjct: 154 FAEYGKQGFTTAIDDFGAGYSGLNLLAEFQPHVLKLDMALTRGIDQDPVRQAIVAGIVLV 213 Query: 352 CTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLN 392 L+I++ A G+ E L GI QG LFA+ +L+ Sbjct: 214 AQRLDIRIIAEGIENAGERDALSELGIRYMQGYLFARPQLD 254 >UniRef50_C6HZP9 Diguanylate phosphodiesterase n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HZP9_9BACT Length = 266 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 70/241 (29%), Positives = 124/241 (51%), Gaps = 7/241 (2%) Query: 162 DSCALSPTINDH---FAFHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTAD 218 D CA + T+ D FAF PIVD + + ++EA+V+ + + + + D Sbjct: 25 DRCA-TGTLLDFDFTFAFQPIVDLDKKEVHSYEALVRGVAGEGAGEILSRVTRDNRFRFD 83 Query: 219 LKSKALAFTMAHALELGDKMISINLLPMTLVNEPD-AVSFLLNEIKANALVPEQIIVEFT 277 +A A ++A L + + I+IN L + V +PD + L + N ++II+E T Sbjct: 84 QLCRAKAISLAARLGMTTR-ININFL-VNAVYDPDQCIRLTLECARQNGFPIDRIILETT 141 Query: 278 ESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHK 337 E E I ++ + G+ +AID FG G++ L L+++ P+ +K+ ++L+T + + Sbjct: 142 EEEKIEDPLFLKNVLEGYRRHGLLIAIDDFGEGYSSLNLMAQLTPEYLKLDRQLVTAIDR 201 Query: 338 SGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSI 397 R I++A+ + I+V A GV T EE L + GI +FQG LFA+ +P + Sbjct: 202 DPLRHRIVRAMATLSREMGIRVIAEGVETVEEARTLRALGISLFQGYLFARPGFESLPPV 261 Query: 398 A 398 + Sbjct: 262 S 262 >UniRef50_A3QA10 Diguanylate cyclase/phosphodiesterase n=17 Tax=Shewanella RepID=A3QA10_SHELP Length = 590 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 65/222 (29%), Positives = 103/222 (46%), Gaps = 5/222 (2%) Query: 173 HFAFHPIVDPLSRRIIAFEAIVQKNEDS----PSAIAVGQRKDGEIYTADLKSKALAFTM 228 H F PI + S+R+ FEA+ + E S P + +G + + + + Sbjct: 20 HVLFQPIFNINSQRLHGFEALSRGPEHSALFSPVPLFQTAAHEGRLSELEEICRRHSIRQ 79 Query: 229 AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEF 288 A EL K+ IN+ P L+ A L+ ++ L P+QI++E +E D Sbjct: 80 FDARELPGKLF-INISPKALLEPSHAKGLTLSLVQELGLSPDQIVIELSEQYPADDIDLL 138 Query: 289 AEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAI 348 E + ++ G AID G G++GL L S PD +KI + I + +S +Q +++I Sbjct: 139 KECLNHYRSQGFLTAIDDLGTGYSGLRLWSELAPDYVKIDRHFIHQIDQSPVKQEFVRSI 198 Query: 349 IKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 I C SL +V A G+ TP E L GI QG L + + Sbjct: 199 IDLCQSLSCKVIAEGIETPAELALLTQLGIVYCQGYLLGRPQ 240 >UniRef50_Q313M2 Diguanylate phosphodiesterase (EAL domain) n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q313M2_DESDG Length = 367 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 64/223 (28%), Positives = 100/223 (44%), Gaps = 15/223 (6%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTADLKSKALAFTMAHALELG 235 F PIV+ S + + + D AI R G +ADL F + A L Sbjct: 136 FQPIVNAASPADVHAYECLARGIDEDGAIIGPARMFGVAKSADL-----LFNLDRACRLA 190 Query: 236 ----------DKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 D+ + IN P T+ N + +N I L P+ ++ E ES+ + Sbjct: 191 AIDGMGRYGLDRPLFINFNPATIYNPVYCLQTTMNAISKAGLQPDMVVFEVVESDEVQDV 250 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 + ++ + G VA+D GAGF+ L LL+R +PD +K+ L+ +VH+ + I Sbjct: 251 NHLLNILRYYRDHGFKVALDDLGAGFSSLNLLARLKPDYVKLDMGLVHDVHREEYKAVIT 310 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 ++ L I+ A GV T EW WL + G + QG LFA+ Sbjct: 311 GNLLAMARGLGIKTIAEGVETEGEWRWLAAHGADYVQGFLFAR 353 >UniRef50_A8F6K1 Diguanylate phosphodiesterase n=2 Tax=Thermotogaceae RepID=A8F6K1_THELT Length = 353 Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 70/222 (31%), Positives = 121/222 (54%), Gaps = 15/222 (6%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDSPSAIA------VGQRKDGEIYTADLK-SKALAFTM 228 F P+V+ + +++ +E + + + + IA + +R D + + L KAL + Sbjct: 123 FQPVVNYKTGKVVCYECLSRGIDQNGELIAPALLFDLAKRLDVLLELSKLAIVKALKVSK 182 Query: 229 AHALELGDKMISINLLPMTLVNEPDAV-SFLLNEIKANALVPEQIIVEFTESEV-ISRFD 286 + + +SIN P L++ PD V + +E++ + PEQ+I+E TESE I F+ Sbjct: 183 QKNIT---QPVSINFPPSILLD-PDFVYKTISDELEKLKMRPEQVILELTESEKEIKEFE 238 Query: 287 EFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQ 346 +F ++SLK I +AID G GF+ L L+ +PD IKI L+ ++ K ++ +++ Sbjct: 239 KFV--LESLKKRNIKIAIDDVGNGFSSLKRLANLKPDIIKIDMGLVRDIQKDRLKRYMVE 296 Query: 347 AIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 A++ +IQV A GV T EE L + G+++ QG LFAK Sbjct: 297 ALVSMAKKSDIQVIAEGVETKEECKTLFALGVDLMQGYLFAK 338 >UniRef50_C8QI00 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Enterobacteriaceae RepID=C8QI00_9ENTR Length = 949 Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 66/218 (30%), Positives = 112/218 (51%), Gaps = 7/218 (3%) Query: 176 FHPIVDPLSRRIIAFEAIVQ-----KNEDSPSAIAVGQRKDGEIYTADLKSKALAFTMAH 230 + PI D + II +EA+++ K P+ + G I+ + A A Sbjct: 722 YQPITDGNEKGIIGYEALMRWHHPIKGLIMPNDFIPIAEETGLIHLLGAYALYEACREAA 781 Query: 231 ALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAE 290 + E G++ +S+NL P+ N +S + ++ + L P ++ VE TES ++ Sbjct: 782 SWE-GEQSVSVNLSPLQFKNSS-LISVVEGALRESGLAPHRLEVEITESVLLDDALGNIR 839 Query: 291 AIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIK 350 +++LKA G+ +A+D FG G++ L L F D+IKI + I ++ S AII+AI Sbjct: 840 TLQNLKALGVQIALDDFGTGYSSLSYLRSFPFDKIKIDKSFINDMGDSREALAIIRAITG 899 Query: 351 CCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 SL+IQ++A GV + E++ L G +FQG LF + Sbjct: 900 MSRSLDIQITAEGVESSEQFARLREEGCTLFQGYLFGR 937 >UniRef50_A8DWU2 Predicted protein n=1 Tax=Nematostella vectensis RepID=A8DWU2_NEMVE Length = 304 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 67/228 (29%), Positives = 110/228 (48%), Gaps = 23/228 (10%) Query: 176 FHPIVDPLSRRIIAFEAIVQ-KNEDS---------PSAIAVGQRKDGEIYTADLKSKALA 225 P +D +RR+I EA+ + + D P A A G Y L + Sbjct: 66 LQPQIDMQTRRVIGVEALARWRKADGKMVPPLSFIPLAEATG-------YILPLGDLLMR 118 Query: 226 FTMAHALELGDK-----MISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESE 280 + A +L D +++N+ L+ D + + ++A+ + PEQI VE TES Sbjct: 119 LALQAAKQLADAGYSQIRVAVNVSAPQLLQH-DFIERFNSHLQASGVAPEQIEVEITESV 177 Query: 281 VISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGP 340 + FD E +++L+A G+ VAID FG GF+ L L DR+KI + + + + Sbjct: 178 AMRNFDSVCEKLRALRAMGVEVAIDDFGTGFSSLSYLRLLPADRLKIDRSFVLEIGEVSD 237 Query: 341 RQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 +Q I +A+I+ + +QV A GV T ++ W+ + G QG LFA+ Sbjct: 238 QQMIAEAVIQIAARVGMQVIAEGVETQQQADWILAHGCRQAQGYLFAR 285 >UniRef50_C9P447 Putative uncharacterized protein n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P447_VIBME Length = 826 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 70/231 (30%), Positives = 109/231 (47%), Gaps = 28/231 (12%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTADLKSKALAFTMAHALELG 235 + PIVD + I FEA+ + P+ KD T ++ S A + L+ Sbjct: 440 YQPIVDTKTWEIAKFEALCRFK---PT-------KDNAFTTQEMISIAEDLNLISELDRT 489 Query: 236 DKMISINLLPM---------------TLVNEPDAVSFLLNE---IKANALVPEQIIVEFT 277 ++S+ LP + ++ DAV L N I+ P+ I +E T Sbjct: 490 VGILSLQALPKIKMLFGQHIGLTINRSFNSKMDAVQILTNTLEMIENYTDSPQSITIELT 549 Query: 278 ESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHK 337 ES + A A+KSL+ G+++AID FG G++ LS D +KI +E +T++ Sbjct: 550 ESAYFDSQSQQANALKSLREQGVTIAIDDFGTGYSSFTYLSDCHFDYLKIDREFVTDIQL 609 Query: 338 SGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 + I+ II C SL I+V A GV T +E M L+S G++ QG F+K Sbjct: 610 GSNKCKIVNMIIGLCHSLGIKVVAEGVETEQEVMVLKSLGVDYMQGYFFSK 660 >UniRef50_D1U592 Diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U592_9DELT Length = 773 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 65/253 (25%), Positives = 120/253 (47%), Gaps = 18/253 (7%) Query: 160 ELDSCALSPTINDHFA-------FHPIVDPLSRRIIAFEAIVQKNEDS----PSAIAVGQ 208 ++ +++ T ND A + PI+D S I+ +EA+ + E S P + Sbjct: 182 DMQGLSIANTYNDILAKSLISTHYQPILDFKSGSILGWEALSRGPEGSSFRSPVILFETA 241 Query: 209 RKDGEIYTADLKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALV 268 + G ++ + + A A L G K+ +N+ P T+ + L ++ LV Sbjct: 242 EQFGRLFALERLCRESAIRNAGPLRKGQKLF-LNIHPKTMADPEFTPGKTLELMEQAGLV 300 Query: 269 PEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKIS 328 P+ I+ E TE + FD F + ++ G VA+D GAG+AGL L+++ QP+ IK+ Sbjct: 301 PDDIVFEITERHSVQDFDLFYRTLDHYRSQGFCVAVDDAGAGYAGLTLIAQLQPEYIKLD 360 Query: 329 QELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 + LI +HK ++A+++ + + ++ A G+ T + + L+ G+ QG A+ Sbjct: 361 KLLIDKIHKDPVKRALVETTVTFADKIGSRIIAEGIETKAQTLCLKDIGVHCGQGYFLAR 420 Query: 389 AKLNGIPSIAWPE 401 P+ PE Sbjct: 421 ------PAFPKPE 427 >UniRef50_B9JNG4 Sensory box/GGDEF family protein n=3 Tax=Rhizobium/Agrobacterium group RepID=B9JNG4_AGRRK Length = 714 Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 72/235 (30%), Positives = 117/235 (49%), Gaps = 9/235 (3%) Query: 158 DKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQ----KNEDSPSAIAVGQRKDGE 213 + EL S + TI AF P+V + I EA+ + SP K G Sbjct: 462 ESELRSAINNGTIEP--AFQPLVSASTGVITGLEALARWPSPAGNISPEVFIPLAEKSGL 519 Query: 214 IYTADLKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQII 273 I L L ++AHA +S+N+ P+ L N PD + ++ +K A P ++ Sbjct: 520 IDA--LGIHMLRRSIAHAKNWNGLTLSVNVSPIQLCN-PDFGAQVIAVLKDFAFDPARLT 576 Query: 274 VEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELIT 333 +E TE +I+ D+ +I LK+ GI A+D FG G+A + L +F DR+KI + L++ Sbjct: 577 LEITEGVLITNPDQARRSIDQLKSIGIKFALDDFGCGYASIGALRQFGFDRMKIDRSLVS 636 Query: 334 NVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 V ++G +++A I T+L I V+A G+ T E+ L +AG + QG + + Sbjct: 637 GVKEAGNGADVLRATISLATALGIPVTAEGIETAEQAEVLRNAGCDQLQGYMVGR 691 >UniRef50_Q2G9C2 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2G9C2_NOVAD Length = 764 Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 68/223 (30%), Positives = 111/223 (49%), Gaps = 12/223 (5%) Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVG-----QRKDGEIYTADLKSKALAFTM 228 A+ PIV S I FEA+++ +I G + G + L S L Sbjct: 523 LAYQPIVHAGSGAIEGFEALLRWPHPERGSIRPGLFVPVAEQAGMMVP--LGSWVLRRVF 580 Query: 229 AHALELGDKMISINLLPMTLVNEP--DAVSFLLNEIKANALVPEQIIVEFTESEVISRFD 286 + + D IS+NL P+ +++ A+ L+ E A+ P + I+E TE ++ R D Sbjct: 581 TESRQWPDCDISVNLSPLQIMSSDFLQAMDELVRETGAD---PRRFILEVTEGVMLDRSD 637 Query: 287 EFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQ 346 + +K L G +A+D FG G++ L L FQ DRIKI + + N+ +I++ Sbjct: 638 HVLDVLKGLNYRGFRIALDDFGIGYSSLSYLRSFQFDRIKIDRSFVQNIEGDLDAHSILK 697 Query: 347 AIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 AI+ +L ++V A GV TP + +++AG +M QG LF +A Sbjct: 698 AIVSLGHTLRMKVVAEGVETPMQRALVQAAGCQMIQGHLFWEA 740 >UniRef50_C0N2S1 Cyclic diguanylate phosphodiesterase domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N2S1_9GAMM Length = 604 Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 56/217 (25%), Positives = 106/217 (48%), Gaps = 5/217 (2%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDSP--SAIAVGQRKD--GEIYTADLKSKALAFTMAHA 231 F PI+ ++I +EA+++ DSP S I + G + DL + + Sbjct: 25 FQPIICMHEQKIFGYEALIRGPSDSPLHSPINLFNTASIHGRLAELDLLCRETSVKRYGE 84 Query: 232 LELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEA 291 L L K+ IN P +L+ + + +K + P Q+++E TE I ++ +A Sbjct: 85 LGLPGKLF-INTSPASLLEQDYPHGLTVQYLKQAGISPRQVVIELTEQYPIEDYELMRQA 143 Query: 292 IKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKC 351 + + G S+AID GAG++GL S +PD +K+ + + N+H+ ++ +Q++I Sbjct: 144 TEHYREMGFSIAIDDLGAGYSGLRTWSELKPDFVKLDRHFMQNIHEDRQKRQFVQSMIDI 203 Query: 352 CTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 S+ QV G+ +E++ + ++ QG FA+ Sbjct: 204 AKSIGCQVIGEGIEIRQEYLAAQGLDMQFAQGYYFAR 240 >UniRef50_Q48L91 EAL domain/GGDEF domain protein n=23 Tax=Pseudomonadaceae RepID=Q48L91_PSE14 Length = 610 Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 57/222 (25%), Positives = 106/222 (47%), Gaps = 5/222 (2%) Query: 173 HFAFHPIVDPLSRRIIAFEAIVQKNEDS----PSAIAVGQRKDGEIYTADLKSKALAFTM 228 H F PIV RRI+ +EA+ + +S P + R+ G + +L + A Sbjct: 40 HSLFQPIVSLSERRILGYEALTRGPSNSALHSPLNLFSIARQAGRLSELELSCRDSACRR 99 Query: 229 AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEF 288 +L K+ +N+ P +L+ L ++ + P+ +++E TE FD Sbjct: 100 FSQQKLPGKLF-LNVSPESLLETSHPPGRTLEMLRRYQIAPKDVVIELTEQMPTDDFDLL 158 Query: 289 AEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAI 348 A+ + G S+A+D GAG++ L L S +PD +KI + I +H+ ++ + ++ Sbjct: 159 YNALHHYRDMGFSIALDDLGAGYSSLRLWSELRPDYVKIDRHFIDGIHQDAVKREFVGSM 218 Query: 349 IKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 ++ + V A G+ PEE L+ G+++ QG L A+ + Sbjct: 219 LQMAKASRATVIAEGIELPEELAALKDMGVDLVQGYLLARPQ 260 >UniRef50_C7R7Z7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R7Z7_KANKD Length = 887 Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 51/155 (32%), Positives = 82/155 (52%), Gaps = 1/155 (0%) Query: 234 LGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIK 293 G +S+N P+ E D V + +K + + P +I VE TE+ ++ D E + Sbjct: 720 FGINSVSVNFSPIQFYRE-DFVEKIAETLKHHNIQPGEITVEITENVLVHDTDHITELLN 778 Query: 294 SLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCT 353 L+ G+ VAID FG+GFA L L+ +++KI + N+H++ AI + I+ T Sbjct: 779 ELRQLGLDVAIDDFGSGFASLRYLNMLPVNKLKIDRSFTGNIHQNKHNAAITRGILGMTT 838 Query: 354 SLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 +EI+V A GV T EE+ +L + QG LF + Sbjct: 839 EMEIEVVAEGVETDEEYQYLREHKCDFMQGYLFCR 873 >UniRef50_B9ZKL4 Diguanylate phosphodiesterase n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZKL4_9GAMM Length = 371 Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 66/237 (27%), Positives = 117/237 (49%), Gaps = 12/237 (5%) Query: 174 FAFHPIVDPLS-RRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFT 227 F F PIV + + A+EA+V+ + + P+ + R ++ D ++ A Sbjct: 137 FHFQPIVHAANPAEVFAYEALVRASTPAGEVIPPNDLFRTARDADLLFHLDRSARINAIR 196 Query: 228 MAHALELGDKMISINLLPMTLVNEPDAVSFLLNEI---KANALVPEQIIVEFTESEVISR 284 A +G ++ IN P + + + + EI A+ P + E ES+ +S Sbjct: 197 RATERGIGSRLF-INFNPTAIYDPAFCLETTVREILSMPAHQSRPAGFVFEVIESDQVSD 255 Query: 285 FDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAI 344 + A ++ + AG VA+D GAG+A L +LS+ +PD +KI +EL++ + +Q I Sbjct: 256 LEHLAGIVERYRRAGFQVALDDLGAGYASLNMLSQLRPDFVKIDRELVSGIDGDVYQQKI 315 Query: 345 IQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPE 401 + +++ L++Q+ A G+ TP EW WL+ ++ QG LFA+ P A PE Sbjct: 316 LGKVVELARELDVQIIAEGIETPGEWRWLKDQ-VDYCQGYLFARPAAEP-PMPAHPE 370 >UniRef50_A5F7V2 EAL family protein n=27 Tax=Vibrio cholerae RepID=A5F7V2_VIBC3 Length = 284 Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 64/226 (28%), Positives = 110/226 (48%), Gaps = 15/226 (6%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTA--------DLKSKALAFT 227 F PIV S R I +E++ + + SP A G ++ A +L+ + Sbjct: 24 FQPIVHLASERAIGYESLSRGPQQSPLHTA------GSLFEAAEQCQRLPELEKICVHKA 77 Query: 228 MAHALELG-DKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFD 286 A G D + INL P L++ L ++ + L Q++ E +E + D Sbjct: 78 AAAWSSFGIDSQLFINLSPDMLLHSQQHQWELPQLMQRHRLSANQVVFEISERTPALQLD 137 Query: 287 EFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQ 346 E +++ L+A G S+AID G+G++GL L S QPD +KI + I N+ + + ++ Sbjct: 138 ELKNSVQHLQAQGFSIAIDDMGSGYSGLKLWSELQPDFVKIDRYFIHNIDSNPIKLKFVR 197 Query: 347 AIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLN 392 ++++ L+ Q+ A GV T E + + GIE+ QG LF + +L Sbjct: 198 SLVQLAEQLDCQLIAEGVETRSELLAIADLGIELVQGYLFGRPQLT 243 >UniRef50_O66495 Putative uncharacterized protein n=1 Tax=Aquifex aeolicus RepID=O66495_AQUAE Length = 338 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 65/217 (29%), Positives = 106/217 (48%), Gaps = 12/217 (5%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTADLKSKALAFTMAHALELG 235 FHPIVD +R+ AFEA+ + I +G K ++ + + +A A Sbjct: 107 FHPIVDVKEKRVKAFEALCRPPIKIVDLINMG--KSTSEFSENF-CRYMALKNARKFLKE 163 Query: 236 DKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSL 295 D + +N P L ++ + + + P Q++VE TE E + A+KSL Sbjct: 164 DMWLFLNFHPRFLREPLKVFGDFISTLYMHDVSPRQVVVELTEYEELE-----ISAVKSL 218 Query: 296 ----KAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKC 351 K+ G+ +A+D G+G++GL LS PD IKI ELI ++HK ++ I+ +I+ Sbjct: 219 ISFLKSEGVKIALDDVGSGYSGLFYLSELGPDIIKIDMELIRDIHKHSMKKVIVNYLIRL 278 Query: 352 CTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 I+V + GV T EE + G + QG +F+K Sbjct: 279 AHENNIKVVSEGVETLEELKTVLYMGTDFVQGFIFSK 315 >UniRef50_D2LS52 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LS52_BACS4 Length = 607 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 64/231 (27%), Positives = 113/231 (48%), Gaps = 20/231 (8%) Query: 171 NDHFAFHPIVDPLSRRIIAFEAIVQKNEDSPSAIA-------------VGQRKDGEIYTA 217 N +HP +D ++I EA+++ N++ ++ + Q D + A Sbjct: 362 NFELYYHPQIDLKENKVIGVEALLRWNDEQLGKVSPYKFIPIAEETGLINQIGDWVLEKA 421 Query: 218 DLKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFT 277 +++K H L +G IN+ P PD VS + N + L P+ + +E T Sbjct: 422 CIQAKKWN-NEGHELRIG-----INISPQQF-QRPDFVSKVKNTLDKTGLSPKLLDLEIT 474 Query: 278 ESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHK 337 E++++ DE + + LK G+S++ID FG G++ L L RF D +KI Q I V Sbjct: 475 ENDLLYNRDECLKTLYRLKQFGVSISIDDFGTGYSSLSYLRRFPIDTLKIDQSFIKEVVD 534 Query: 338 SGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 + QAI+ +II+ +++++V A GV T E +L + QG L+++ Sbjct: 535 NTNDQAIVTSIIQLAHNMKLRVIAEGVETSEMVAFLNKLSCDEMQGFLYSQ 585 >UniRef50_B5ZF52 Diguanylate phosphodiesterase n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZF52_GLUDA Length = 257 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 63/204 (30%), Positives = 100/204 (49%), Gaps = 5/204 (2%) Query: 174 FAFHPIVDPLSRRIIAFEAIVQK--NEDSPSAIAVGQRKDGEIYTADLKSKALAFTMAHA 231 AF P+VD ++RRI +EA+V+ E +PS +A Q + +Y D + A +A Sbjct: 26 MAFQPVVDLVNRRIDGYEALVRGPGGEGAPSVLA--QVTEENLYAFDQACRTRAIRLASR 83 Query: 232 LELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEA 291 L L D+ +SIN LP + N + L + + E + E E+E ++ + Sbjct: 84 LGL-DRRLSINFLPNAVYNPRACIQATLQAARESDFPLENLTFEILETEHLTETKHLQDI 142 Query: 292 IKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKC 351 I G VA+D F G +GL+ L+ +PD IKI + L+ + + R+ II II+ Sbjct: 143 IGEYHHHGFKVALDDFPTGQSGLMRLADLKPDIIKIDRALVQDCDRDQVRRTIIAGIIRI 202 Query: 352 CTSLEIQVSAMGVATPEEWMWLES 375 T L ++V GV EE L + Sbjct: 203 ATDLGVKVVIEGVERLEEVRALHA 226 >UniRef50_B3X614 Diguanylate phosphodiesterase n=2 Tax=Proteobacteria RepID=B3X614_SHIDY Length = 42 Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 42/42 (100%), Positives = 42/42 (100%) Query: 362 MGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEKK 403 MGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEKK Sbjct: 1 MGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEKK 42 >UniRef50_A8VV37 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VV37_9BACI Length = 702 Score = 91.3 bits (225), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 49/153 (32%), Positives = 87/153 (56%), Gaps = 1/153 (0%) Query: 236 DKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSL 295 D +SIN+ P + + + SFL+ E+K + PE+II+E TE I+ A+ SL Sbjct: 543 DVEVSINIPPNVFLLD-EYRSFLMQEVKRRGIRPERIILEITEDVFIADMSVVIAAVDSL 601 Query: 296 KAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSL 355 +A G +++D FG G++ L +S+ Q D +K+ + I + + ++++II+ S+ Sbjct: 602 RAFGFRISLDDFGTGYSSLSYISQLQTDEVKVDKSFIDQMEMNERSWNLLKSIIRIAKSM 661 Query: 356 EIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 QV A GV T E+ M L+ G ++ QG +++K Sbjct: 662 NYQVVAEGVETAEQVMKLKETGCDIVQGYVYSK 694 >UniRef50_A3JDG5 Putative uncharacterized protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3JDG5_9ALTE Length = 591 Score = 91.3 bits (225), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 63/221 (28%), Positives = 101/221 (45%), Gaps = 13/221 (5%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTADLKSKALAFTMAHALELG 235 F PIVD ++ +E + + DSP A + GE + ++ A LE G Sbjct: 23 FQPIVDCQKGTVLGYEVLSRGPSDSPLHGAPALFQAGEQC-----KQVISLEQACLLEAG 77 Query: 236 DKMIS--------INLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDE 287 I +N+ P L+ + A L + + N L PE +++E +E + Sbjct: 78 QSCIRHGVSHLVFVNVSPGLLLPKVFAEDRLQSLLTTNGLKPENVVIELSERYPADNPEA 137 Query: 288 FAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQA 347 + +LK G VAID G G++GL L S QPD +KI + I +V + ++ +++ Sbjct: 138 LKARLTALKKRGFRVAIDDLGTGYSGLKLWSEIQPDFVKIDRHFIRDVDRDLVKKEFVRS 197 Query: 348 IIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 +I C L ++ A GV T E L S GI + QG L + Sbjct: 198 VINLCERLGCRLIAEGVETVAELTLLRSMGIHLIQGFLLGR 238 >UniRef50_A1SWI5 Regulatory protein for cyclic-di-GMP, EAL domain n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SWI5_PSYIN Length = 409 Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 3/220 (1%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDSP--SAIAVGQRKDGEIYTADLKSKALAFTMAHALE 233 F PI S + +EA+++ DSP + A+ ++L+ ++A +E Sbjct: 20 FQPIYATNSSEVYGYEALIRGPYDSPLHNPEALFDAAIEYNLLSELELICRKKSIARFVE 79 Query: 234 LGDK-MISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAI 292 LG K ++ IN+ PM + L+ + + L PEQ+++E +E I D +A+ Sbjct: 80 LGLKGLLFINVNPMVFLQSDHPQGKTLSYLTEHKLKPEQVVIELSEKYPIDDPDILQKAL 139 Query: 293 KSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCC 352 + G +A+D G+G+AGL L S +PD +KI + I K + I++I Sbjct: 140 IYYRDLGFKIAVDDLGSGYAGLKLWSEVKPDFVKIDRYFIDQCDKDPIKSEFIKSIFNLG 199 Query: 353 TSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLN 392 + +V A G+ T EE+ L+ GI ++QG LFA+ L+ Sbjct: 200 QRINAKVIAEGIETEEEFWLLDELGISIYQGFLFARPMLS 239 >UniRef50_B1J7P7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Gammaproteobacteria RepID=B1J7P7_PSEPW Length = 699 Score = 90.9 bits (224), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 60/222 (27%), Positives = 113/222 (50%), Gaps = 9/222 (4%) Query: 173 HFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFT 227 H + PIVD + + +EA+++ + P + G I+ +L ++AL Sbjct: 465 HLHYQPIVDQQTSSVTGYEALLRWEHPTRGMVMPMDFIPIAEETGLIH--ELGTRALNLA 522 Query: 228 MAHALEL-GDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFD 286 A ++ +S+NL P+ N + V + + + L P+++ +E TES ++ + Sbjct: 523 CQEAASWDSEQTVSVNLSPVQFKN-ANLVHTVALALADSGLAPQRLELEITESVLLGNSE 581 Query: 287 EFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQ 346 E +++LK G+S+++D FG G++ L L F DRIKI + + ++ S +I++ Sbjct: 582 ENVRTLRALKDLGVSISLDDFGTGYSSLGYLRSFPFDRIKIDKSFVHDMCDSREAMSIVR 641 Query: 347 AIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 AI + SL I+ +A GV + E+ L + G FQG L+ + Sbjct: 642 AITELSNSLMIKTTAEGVESEEQMQRLAAEGCSHFQGYLYGR 683 >UniRef50_Q0A703 Diguanylate phosphodiesterase n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A703_ALHEH Length = 352 Score = 90.9 bits (224), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 54/219 (24%), Positives = 104/219 (47%), Gaps = 7/219 (3%) Query: 176 FHPIVDPL-SRRIIAFEAIVQKNEDSPSAIAVGQ-----RKDGEIYTADLKSKALAFTMA 229 F PIV R I A+E++ + + + I+ G+ R ++ D ++ A + Sbjct: 126 FQPIVHADDGRTIFAYESLARGLDHAGQLISPGRLFPAARAANLLFHLDRAARISAIRQS 185 Query: 230 HALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFA 289 H + + + IN P + + + E++ + P + E E++ ++ Sbjct: 186 HQHRI-QQPVFINFNPTAIYDPGFCLRTTFKEVRRLGIDPANFVFEVVETDSVTDETHLK 244 Query: 290 EAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAII 349 ++ + G +A+D GAGF L LL + +PD IK+ +EL+ VH + +I +I Sbjct: 245 SILEEYRRQGFRIALDDLGAGFGSLTLLKQIRPDFIKLDRELVDGVHWDNYKASITAHLI 304 Query: 350 KCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 + L++++ A G+ PE+W WL G++ QG FA+ Sbjct: 305 RMGKDLQVRIIAEGIEQPEDWHWLRERGVDYVQGFHFAR 343 >UniRef50_B4U8C5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U8C5_HYDS0 Length = 633 Score = 90.9 bits (224), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 69/219 (31%), Positives = 106/219 (48%), Gaps = 11/219 (5%) Query: 176 FHPIVDPLSRRIIAFEAIVQ-KNEDS---PSAIAVGQRKDGEIYTAD--LKSKALAFTMA 229 + PI + A+EA+++ KN DS P + ++ G Y D + +A+A Sbjct: 74 YQPIFSNKDGFVYAYEALLRVKNGDSYIYPKEVFSIAKEMGIDYKLDAICREQAIAQYQQ 133 Query: 230 HALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFA 289 L+L IN+ P + + F LN + N L P+ +++E TESE I D Sbjct: 134 KGLKL-----FININPNSSNSGFFKRGFTLNVVLQNNLKPQDVVLELTESEKIDDIDMLK 188 Query: 290 EAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAII 349 E IK K+ G S+A D FG G+ L +LS +PD IK ELI + +S + I++ I+ Sbjct: 189 ETIKYYKSVGFSIAFDDFGTGYNSLNILSHIEPDYIKFPIELINGIARSKLKWQIVRGIM 248 Query: 350 KCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 I+ A G+ T E+ + GI+ QG L AK Sbjct: 249 DMAIKNGIRTIAEGIETKEDLEVVLELGIDYSQGFLLAK 287 >UniRef50_C6W8B9 Diguanylate cyclase/phosphodiesterase n=2 Tax=Pseudonocardineae RepID=C6W8B9_ACTMD Length = 565 Score = 90.5 bits (223), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 57/218 (26%), Positives = 105/218 (48%), Gaps = 1/218 (0%) Query: 173 HFAFHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTADLKSKALAFTMAHAL 232 FAF P+ + + ++A EA+ + ++ + + + G + AD+ A A Sbjct: 9 RFAFQPLFNLNTGGVVAVEALARPHDGTALDLLQAAFRAGHLVDADVALACRAVRHAAEH 68 Query: 233 ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAI 292 E G + +NL+ MT+ +P+ + LL + P++++VE + + Sbjct: 69 EFGLPL-HVNLMSMTVAEQPEKLEPLLRALHEVGRSPDRLVVELGVPYTRTPRKALLAGV 127 Query: 293 KSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCC 352 + L+ AG+ VA+D G G L LL+ PD++K+ + ++ + G R A++ A++ C Sbjct: 128 RWLRDAGVRVALDGVGDGDVPLALLTDVAPDQLKLDRGIVVGLPDDGGRAALLTALLGVC 187 Query: 353 TSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 + A GV T + L AG+ M QGDL A A+ Sbjct: 188 EQTGSVLVAEGVETEAQLAALRRAGVRMAQGDLLAPAR 225 >UniRef50_Q31EL1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31EL1_THICR Length = 599 Score = 90.5 bits (223), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 65/237 (27%), Positives = 108/237 (45%), Gaps = 9/237 (3%) Query: 159 KELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS----PSAIAVGQRKDGEI 214 +EL I+ HF PIV +R I AFEA+ + E S P+ + + + Sbjct: 21 RELQQVFEHQAISTHF--QPIVGLKTRSIYAFEALTRGPESSALYSPANLFTVASEHNCL 78 Query: 215 YTADLKSKALA---FTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQ 271 DL ++ ++ + + + +N+ +L+N L+ ++ L Q Sbjct: 79 LEMDLMARRVSIKNYMKTVSTHQNQAKLFLNISVSSLMNTEHRTGLTLDCLQYYGLNIRQ 138 Query: 272 IIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQEL 331 +++E TE + + F AIK + G VAID G+G+ GL L S +PD +KI + Sbjct: 139 VVIEITELQPVEDSGLFLNAIKHYRKMGFKVAIDDLGSGYNGLKLWSEVKPDFVKIDKHF 198 Query: 332 ITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 I N+ K + ++ I+ SL ++ A GV T E LE G++ QG L K Sbjct: 199 IANIDKQADKYRFMETILTLAKSLGTKIIAEGVETEAELQILEKLGVDFVQGFLLKK 255 >UniRef50_C5S6B5 Diguanylate phosphodiesterase n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S6B5_CHRVI Length = 354 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 59/248 (23%), Positives = 113/248 (45%), Gaps = 10/248 (4%) Query: 161 LDSCALSPTIN-DHFA--FHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDG 212 LD+C L + F F PI+ ++ +E++++ P I + Sbjct: 107 LDACGLLEILEAKRFVSWFQPILSATDGAVVGYESLLRGLRPDGRLMFPGEIFALANDND 166 Query: 213 EIYTADLKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQI 272 ++ D +++ A A A +G ++ +N +P + + + + + P ++ Sbjct: 167 LLFQVDRQARESALRCAAAEGIGSQLF-VNFVPTAIYDPAHCLQSTVGWARKLGFDPGRL 225 Query: 273 IVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELI 332 + E E+E + D + + AG VA+D G+G+A L LL+ +PD IK+ E++ Sbjct: 226 VFEVVETERVGDLDHLKHILDFYRDAGYRVALDDVGSGYASLNLLATLKPDIIKVDMEIV 285 Query: 333 TNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLN 392 + RQ++ +A++ L IQV A G+ T E +++ G ++ QG LFA+ Sbjct: 286 RGIDTDTQRQSVFRALVGIARDLGIQVLAEGIETQAELLYVAGEGADLVQGYLFARPAPQ 345 Query: 393 GIPSIAWP 400 P WP Sbjct: 346 P-PEPQWP 352 >UniRef50_B2V685 Diguanylate cyclase/phosphodiesterase n=3 Tax=Sulfurihydrogenibium RepID=B2V685_SULSY Length = 800 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 70/239 (29%), Positives = 108/239 (45%), Gaps = 14/239 (5%) Query: 160 ELDSCALSPTINDHFA--FHPIVDPLSRRIIAFEAIV-----QKNEDSPSAIAVGQR-KD 211 E L ND F F PIV+ + I +E + ++N+ P+ + K Sbjct: 559 EFKDAILDAIKNDRFVPFFQPIVEAKTGNIYGYEVLARIYDEKENKYIPAYQFINNAIKY 618 Query: 212 GEIYTAD--LKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVP 269 G + D ++ KA+ + L +K + +N+ + + + L N +N L P Sbjct: 619 GLVEEIDKIIQEKAIKYFSEKKL---NKCLFLNM-SKNFIYKSGNLENLYNLCVSNGLKP 674 Query: 270 EQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQ 329 E + +E TE E I F E I+ K+ G AID FGAG++ + L F D IKI Sbjct: 675 ENVYLEITEEEAILDFKNVKELIQYGKSLGFRYAIDDFGAGYSNFVYLKHFNVDIIKIDG 734 Query: 330 ELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 L+ N+H+ Q I++ II+ I+V A V EE L G++ QG LF K Sbjct: 735 SLVANIHQDLDNQIIVENIIRIAKHKNIKVLAEMVELEEEKDILIKLGVDYLQGYLFGK 793 >UniRef50_A5GE54 Diguanylate phosphodiesterase n=2 Tax=Geobacter RepID=A5GE54_GEOUR Length = 475 Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 64/226 (28%), Positives = 110/226 (48%), Gaps = 23/226 (10%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTADLKSKALAF--------- 226 F PI+ + +EA+ + + PS +A D E+ A L F Sbjct: 255 FQPIISLCDGSVYGYEALSRVSR--PSHLA-----DPELLFAKSGEYGLTFPLERLCRRK 307 Query: 227 TMAHALELG-DKMISINLLPMTLV---NEPDAVSFLLNEIKANALVPEQIIVEFTESEVI 282 + A ELG + +N+ P L ++ + LL+E+ + I E TE +I Sbjct: 308 ALIRAKELGISGRLFLNVCPSLLQANDHKRGVTAALLDEL---GIQRSSITFELTERTLI 364 Query: 283 SRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQ 342 ++ F + + G S+AID G+G+AGL +L+R +PD +K+++ LI ++ S RQ Sbjct: 365 EDYELFNRVLSYYREQGYSIAIDDLGSGYAGLKMLARMEPDYVKLARFLICDIDASSTRQ 424 Query: 343 AIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 A+++A++ C + +V A GV EE +L G+ + QG L A+ Sbjct: 425 ALVEALVTFCGKIGAKVIAEGVEREEELDYLRDIGVTLCQGYLLAR 470 >UniRef50_Q47CB3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Dechloromonas aromatica RCB RepID=Q47CB3_DECAR Length = 715 Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 50/150 (33%), Positives = 84/150 (56%), Gaps = 1/150 (0%) Query: 239 ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAA 298 ISINL + + F+ + + Q+I+E TES ++ D + I L+ Sbjct: 542 ISINLSAESFFQH-SLIQFIDEVLNRTGVPASQLIIELTESVLMQNADTAHQVINELRQR 600 Query: 299 GISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQ 358 GI +++D FG GF+ L L+RF D IKI + + ++ + G ++A++QAII T+L ++ Sbjct: 601 GIRISLDDFGTGFSSLGYLNRFSIDEIKIDRSFVIDLEEQGKKRALVQAIITLGTALGLK 660 Query: 359 VSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 V A GV T ++ L + G ++FQG FA+ Sbjct: 661 VVAEGVETRQQADLLRAMGCDIFQGFFFAR 690 >UniRef50_C4ZM39 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZM39_THASP Length = 920 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 51/150 (34%), Positives = 85/150 (56%), Gaps = 4/150 (2%) Query: 250 NEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGA 309 ++PD V+ + + ++A A+ P ++ +E TES ++S DE + L+A GI A+D FG Sbjct: 768 HQPDFVASVKDSVRAAAIDPCRLELELTESAILSDVDETIRRMNELRALGIRFALDDFGT 827 Query: 310 GFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEE 369 G++ L L R D++KI Q + ++ + +AI+ AI+ +L ++V A GV PE+ Sbjct: 828 GYSSLSYLKRLPFDQLKIDQSFVRDMAEDESSEAIVLAILSLSHALGLEVVAEGVEMPEQ 887 Query: 370 WMWLESAGIEMFQGDLFAKAKLNGIPSIAW 399 +L G + FQG LF K +P AW Sbjct: 888 RDFLRQHGCDSFQGYLFGKP----LPMEAW 913 >UniRef50_A4SJC3 GGDEF domain protein n=2 Tax=Aeromonas RepID=A4SJC3_AERS4 Length = 667 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 50/153 (32%), Positives = 81/153 (52%), Gaps = 1/153 (0%) Query: 236 DKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSL 295 D ++SINL P+ +PD + I+ + L P Q+ +E TE ++ DE + +L Sbjct: 500 DLVLSINLSPLQF-RDPDLCPQIFACIERHGLAPWQLELEITEGVLMENADEIESNLANL 558 Query: 296 KAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSL 355 AG +AID FG G+ L L R Q +K+ + + + AI++++I L Sbjct: 559 IEAGFQLAIDDFGTGYCSLAYLPRLQVATLKLDRSFTQGLATNQATTAIVRSVIGLGHEL 618 Query: 356 EIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 I+++A GV TPE+ WL AG + QG LF++ Sbjct: 619 GIRITAEGVETPEQQAWLVQAGCDRLQGYLFSR 651 >UniRef50_B9R1X0 Cyclic diguanylate phosphodiesterase domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R1X0_9RHOB Length = 710 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 47/153 (30%), Positives = 87/153 (56%), Gaps = 1/153 (0%) Query: 236 DKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSL 295 ++ ++IN+ P D + ++++ L P+++ +E TES +IS D ++ + Sbjct: 483 NRRVAINMSPAQFA-AGDIQKRVARALQSSGLDPKRLEIEITESLLISNTDSVVHTLRQI 541 Query: 296 KAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSL 355 + G+S+A+D FG G++ L LS F D+IKI + I ++ K AI+ +I+ SL Sbjct: 542 RDMGVSIAMDDFGTGYSSLSYLSLFPFDKIKIDKAFIQDLGKEASTDAIVTSIVGLGRSL 601 Query: 356 EIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 + ++A GV T E+ + L +AG ++ QG L+ K Sbjct: 602 NVTITAEGVETEEQAILLRAAGCDLIQGYLYGK 634 >UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZ89_CHRVO Length = 936 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 66/230 (28%), Positives = 112/230 (48%), Gaps = 17/230 (7%) Query: 172 DHFAFH--PIVDPLSRRIIAFEAIVQKNEDSPSA------IAVGQRKD-----GEIYTAD 218 D F H P V+ S RI+ EA+++ N S I V + + G A+ Sbjct: 691 DEFVLHYQPQVEMESGRIVGAEALIRWNHPSLGLLGPVRFIQVAEERGFIVQIGNWVIAE 750 Query: 219 LKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTE 278 + + + A EL ++INL + +PD + ++++ L + +E TE Sbjct: 751 ATRQLVEWRRAGLPEL---TLAINLSALQF-RQPDLALQVKQALESSGLPGHALDIEVTE 806 Query: 279 SEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKS 338 S ++ + I ++K G+ ++ID FG G++ L L RF+ D++KI + + ++ + Sbjct: 807 SIIMEDAQATIQTIDNMKNMGLRLSIDDFGTGYSSLSYLKRFKADKLKIDRSFVRDIPQD 866 Query: 339 GPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 AI +AII +L +QV A GV T E+W +LE G + QG L AK Sbjct: 867 ADDSAIARAIINMAKNLNMQVVAEGVETMEQWQFLEQEGCDFVQGYLIAK 916 >UniRef50_A8ET21 EAL domain protein n=3 Tax=delta/epsilon subdivisions RepID=A8ET21_ARCB4 Length = 356 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 66/240 (27%), Positives = 119/240 (49%), Gaps = 14/240 (5%) Query: 157 SDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQK-NED----SPSAIAVGQRKD 211 S +EL S + HF PI+D + I +E + + NED SP+ + + Sbjct: 112 SAQELSSLLSKGGLTTHF--QPILDVKTNTIYGYETLARGVNEDGTLVSPNKLFTWAKDG 169 Query: 212 GEIYTADLKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIK-ANALV-- 268 ++ D + + A + K+ IN +P T + +P+ L + +K AN+L Sbjct: 170 DMLFYLDRACRENSLKTAAIKNIRAKVF-INFIP-TAIYDPNHC--LQSTVKWANSLEFD 225 Query: 269 PEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKIS 328 P+ +I E ESE I + + K+ G +A+D G+G++ L ++ + PD +K+ Sbjct: 226 PKNVIFEVVESENIEDIEHLKNILNFYKSKGFMIALDDVGSGYSSLNMIVQLLPDIVKVD 285 Query: 329 QELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 +E+I +++K+ Q++ AI+ I V A G+ T EE+++L+ G + QG FAK Sbjct: 286 REIIKDIYKNKANQSVFTAIVNIAKENNIVVLAEGIETKEEYLYLKENGASLAQGYYFAK 345 >UniRef50_A4BJS0 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Reinekea blandensis MED297 RepID=A4BJS0_9GAMM Length = 857 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 63/225 (28%), Positives = 104/225 (46%), Gaps = 11/225 (4%) Query: 173 HFAFHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQ----RKDGEIY------TADLKSK 222 H F P VD R+I+ EA+++ S ++ G+ +DGE+ +L + Sbjct: 614 HLVFQPQVDARDRKILGAEALLRWTHPSRGMVSPGEFIPLLEDGEMMPLVGQKVIELAAA 673 Query: 223 ALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVI 282 LA L D +S+N+ P + D VS + + + L I +E TE +I Sbjct: 674 QLADWRKEGLIREDFRLSLNVSPQQF-RQADFVSTVRTVLDEHDLPAYLIDLEITEGMII 732 Query: 283 SRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQ 342 D A+K L+ GI +ID FG G++ L L R D +K+ Q + ++ Sbjct: 733 DNIDHTVAAMKELREMGIHFSIDDFGTGYSNLNYLKRLPLDVLKVDQSFVRDIEHDANDT 792 Query: 343 AIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFA 387 AI++ II L++ A GV T ++ L G ++FQG L++ Sbjct: 793 AIVRTIIAMADQLKLNTVAEGVETEDQLTLLRELGCQVFQGYLYS 837 >UniRef50_B9JAE4 GGDEF family protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JAE4_AGRRK Length = 738 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 66/219 (30%), Positives = 107/219 (48%), Gaps = 8/219 (3%) Query: 175 AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTMA 229 A+ P+VD +S I EA+V+ N SP A G I L L A Sbjct: 496 AYQPLVDAVSHDITGVEALVRWNRPGYGPVSPDAFIPIAETSGLIEALGLL--VLRKACA 553 Query: 230 HALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFA 289 A + D I++N+ P N P ++ + +K + E++ +E TE +I + Sbjct: 554 AARQWPDLRIAVNVSPGQFRN-PAFADYVRHVLKDAEIEAERVTLEITEGYMIQNPERTR 612 Query: 290 EAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAII 349 ++I+ LK G+ VA+D FG+GF+ + L +F DRIKI + L +V + ++QA + Sbjct: 613 QSIERLKKLGVKVALDDFGSGFSSIGYLRQFGFDRIKIDRSLTMDVLTDSRSRDMLQATV 672 Query: 350 KCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 SL++ V+A G+ T E+ L+ G + QG F K Sbjct: 673 ALARSLDLPVTAEGIETEEQGTALKLFGCDELQGYFFGK 711 >UniRef50_Q1YXX2 Putative signal transduction protein n=2 Tax=Photobacterium profundum RepID=Q1YXX2_PHOPR Length = 725 Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 66/257 (25%), Positives = 122/257 (47%), Gaps = 20/257 (7%) Query: 159 KELDSCALSPTIN-----DHFAFH--PIVDPLSRRIIAFEAIVQKNEDS-----PSAIAV 206 K LD ++ +++ F H P+ + S ++ +EA+++ N P Sbjct: 467 KALDKVSIEESLDTAISKKQFVLHYQPVFNFYSNKLCCYEALIRWNHPREGLLYPERFIG 526 Query: 207 GQRKDGEIYTAD--LKSKALAFTMAHALELGDK-MISINLLPMTLVNEPDAVSFLLNEIK 263 + G+I + + H L +G + I++NL P N+PD + + I+ Sbjct: 527 IAEESGKIKNIGYWVIQEVCNVIKMHQLHIGKRHRIAVNLSPRQF-NDPDLLENIRRIIR 585 Query: 264 ANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPD 323 + + +E TES ++ + ++ K GI+VAID FG G++ L +L R D Sbjct: 586 NVGIDARFLEIEITESTLMENVESAIYTLRQFKELGITVAIDDFGTGYSSLAMLKRLPVD 645 Query: 324 RIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQG 383 ++KI + + ++ + Q I+QA+I +L+I V A G+ T E++ L+ G + QG Sbjct: 646 KLKIDRSFVKDLDSNNSDQKIVQALISMAHTLQISVIAEGIETQEQFNLLQQYGCDFGQG 705 Query: 384 DLFAK----AKLNGIPS 396 LF++ +LNG S Sbjct: 706 YLFSRPVPITELNGAMS 722 >UniRef50_C5BPE5 Thioester reductase n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BPE5_TERTT Length = 614 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 52/172 (30%), Positives = 87/172 (50%), Gaps = 10/172 (5%) Query: 237 KMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLK 296 K IS+N+ N+ + ++ L+N I + P + +E TES +I + + L+ Sbjct: 437 KRISVNV-SAAQFNQGNFLNDLINAIDQTGINPNMLCIELTESSLIKNVSDTVRKMGELR 495 Query: 297 AAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLE 356 GI +++D FG G++ L LS+F +KI Q + N+H++ AI++ I+ SL Sbjct: 496 KLGIQISVDDFGTGYSSLAYLSQFPISALKIDQTFVRNLHENKGNNAIVETIMSLGDSLN 555 Query: 357 IQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA---------KLNGIPSIAW 399 + + A GV EE L+S G E +QG LF L G P+I++ Sbjct: 556 LSIIAEGVECREELDALQSLGCEYYQGFLFKPPLPYDQLLPLALQGQPTISY 607 >UniRef50_A8I9U8 Putative signal transduction protein n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8I9U8_AZOC5 Length = 742 Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 59/215 (27%), Positives = 105/215 (48%), Gaps = 4/215 (1%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQ---RKDGEIYTADLKSKALAFTMAHAL 232 + P VD +RRI+ EA+V+ N + G+ +G + + L A Sbjct: 496 YQPQVDLETRRIVGLEALVRWNHPQRGRLLPGEFLWVAEGTRLITRIDAWVLRHACLEAK 555 Query: 233 ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAI 292 G +++N+ P+ L P +L+ ++ PE++ +E TES ++ + E + Sbjct: 556 AFGGISLAVNMSPVNL-RYPGMAERILDVLRETGFPPERLEIELTESAMLDSGRDVKETL 614 Query: 293 KSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCC 352 L+A G+ +A+D FG G A LL + F +IKI + I N+ +I++ +I+ Sbjct: 615 DRLRAHGVRLALDDFGTGHASLLHVRNFPVTKIKIDRSFIANLGVERDAASIVEHVIRLG 674 Query: 353 TSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFA 387 SL I ++A GV E+ +L + G + QG LF+ Sbjct: 675 RSLGITLTAEGVDNLEQVRFLRAFGAQQAQGFLFS 709 >UniRef50_B4RW56 Sensory box/GGDEF family protein n=1 Tax=Alteromonas macleodii 'Deep ecotype' RepID=B4RW56_ALTMD Length = 456 Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 75/247 (30%), Positives = 121/247 (48%), Gaps = 13/247 (5%) Query: 153 IADGSDKELDSCALSPTI-NDHF--AFHPIVDPLSRRIIAFEAIVQKNED-----SPSA- 203 +AD K L S LS + ND F A+ VD + II FE +++ ++D SP+ Sbjct: 196 LADTKRKVLISTRLSSALENDAFYLAYQAKVDA-EQNIIGFETLLRWHDDVLGHVSPAEF 254 Query: 204 IAVGQRKDGEIYTADLKSKALAFTMAHALE-LGDKMI-SINLLPMTLVNEPDAVSFLLNE 261 I + ++ D + K L ++ G ++I SINL P L N F+L Sbjct: 255 IPIAEQTDKISLISMWIIKRLEIEAPRLIKSFGSQIIISINLSPQDL-NSEKLTQFILKG 313 Query: 262 IKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQ 321 ++ N L + + +E TE+ ++ F+ +S+K G +A+D FG G++ L L++F Sbjct: 314 MRENKLPAKNLEIEITETAYMNNFNVANSFFESIKHYGCQLALDDFGTGYSSLSYLTKFD 373 Query: 322 PDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMF 381 D +KI + + N+ S + I + IIK SL V A GV T E+ +L G Sbjct: 374 IDTLKIDRSFVNNIGISEQSELITKTIIKMAKSLNFSVCAEGVETREQATFLLQNGCHAL 433 Query: 382 QGDLFAK 388 QG L++K Sbjct: 434 QGFLYSK 440 >UniRef50_B5ZQU7 Diguanylate cyclase/phosphodiesterase n=16 Tax=Rhizobium/Agrobacterium group RepID=B5ZQU7_RHILW Length = 736 Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 65/226 (28%), Positives = 111/226 (49%), Gaps = 20/226 (8%) Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIY-----TADLKSKALAFTM 228 A+ P++D S EA+V+ N I+ E++ T+ L F + Sbjct: 492 LAYQPLIDAASYAPTGVEALVRWNRPGHGPISP------EVFIPIAETSGLIESLGLFVL 545 Query: 229 AHALELGDKM----ISINLLPMTLVNEP--DAVSFLLNEIKANALVPEQIIVEFTESEVI 282 A E + +S+N+ P N D V ++L + + A +I +E TE +I Sbjct: 546 RKACETAKQWPELNVSVNVSPGQFRNPAFADYVRYVLKQTEVEA---GRITLEITEGYMI 602 Query: 283 SRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQ 342 ++I+ LKA G+ VA+D FG+GF+ + L +F DRIKI + L+ V++ ++ Sbjct: 603 QNPQRTRQSIERLKALGVKVALDDFGSGFSSIGYLRQFGFDRIKIDRSLVMGVNEDKRQR 662 Query: 343 AIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 ++QA + SL+I V+A G+ T E+ + + G + QG LF K Sbjct: 663 EMLQATVALARSLDIPVTAEGIETEEQAIAMRLFGCDCLQGYLFGK 708 >UniRef50_B8DJX8 Diguanylate cyclase/phosphodiesterase n=5 Tax=Desulfovibrio RepID=B8DJX8_DESVM Length = 883 Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 61/217 (28%), Positives = 105/217 (48%), Gaps = 5/217 (2%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDSP--SAIAVGQRKD--GEIYTADLKSKALAFTMAHA 231 + PIV + RI+A+EA+ + D+P S + + + G ++ + + A A Sbjct: 315 YQPIVRFPTGRIMAWEALSRGPVDTPFHSPMMLFDIAEELGMLFALERICRERAIACAGT 374 Query: 232 LELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEA 291 L D+ + +N+ P TL + L ++A L PE I+ E TE I F F + Sbjct: 375 LA-PDQKLFLNIHPRTLTDPGFTPGSTLEAVRAMGLAPENIVFEITERHSIRDFGVFYKT 433 Query: 292 IKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKC 351 + + G VAID G G++GL ++ +PD IKI LI N+++ R+A+++ ++ Sbjct: 434 LSHYRGQGFKVAIDDAGTGYSGLATIAELKPDFIKIDMSLIRNINRDPVRRALMETLVSF 493 Query: 352 CTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 + +V A G+ T EE L + G QG + Sbjct: 494 AEKIGSRVIAEGIETREEAATLMAIGAHYGQGYYLGR 530 >UniRef50_Q0K510 Predicted signal transduction protein containinga membrane domain, an EAL and a GGDEF domain n=2 Tax=cellular organisms RepID=Q0K510_RALEH Length = 1085 Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 64/224 (28%), Positives = 111/224 (49%), Gaps = 13/224 (5%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQ-----RKDGEIYTADLKSKALAFTMAH 230 + PIVD + I EA++ N A+ + + G + + A A Sbjct: 835 YQPIVDAATLAITGVEALITWNTPERGAMQPAEFIPIAEQSGLVAPLGEWTLATACREIQ 894 Query: 231 ALE--LGDKM-ISINLLPMTL--VNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 AL LG ++ +++N+ P+ L N PD V+ L + L P+ +++E TE ++ Sbjct: 895 ALRQALGSEIEVAVNISPLQLRQANFPDTVAHCLQQA---GLPPQGLVIEVTEGILVDGG 951 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 + E + L+ G+ ++ID FG G++GL L+R R+KI + + +V G QA+ Sbjct: 952 ETTIETFRRLRELGVGLSIDDFGTGYSGLNYLTRLPISRLKIDKSFVDDVATPGHDQAVA 1011 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 AII L ++V A GV T ++ +L + G + QG LF++A Sbjct: 1012 AAIIALGHQLHLKVIAEGVETAAQFEFLRAQGCDGLQGFLFSQA 1055 >UniRef50_B9QZL6 Cyclic diguanylate phosphodiesterase domain protein n=2 Tax=Labrenzia RepID=B9QZL6_9RHOB Length = 759 Score = 87.8 bits (216), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 59/215 (27%), Positives = 112/215 (52%), Gaps = 8/215 (3%) Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQ-----RKDGEIYTADLKSKALAFTM 228 A+ P D ++RI++ EA+ + ++ + ++ Q + G I L A Sbjct: 508 LAYQPQSDTAAQRIVSVEALARWTKEDGTVVSPAQFIPVAEETGLINELGLWVLNKACAK 567 Query: 229 AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEF 288 AH + D ++S+N+ P P V ++ + N L P+++ +E TES R D Sbjct: 568 AH--DWPDVVMSVNVSPNQF-KHPRFVEKVMAILATNNLAPQRLEIEVTESVFAGRNDTV 624 Query: 289 AEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAI 348 ++++ LK GI VA+D FG+G++ L L RF D +K+ ++ ++++ + +AII +I Sbjct: 625 LKSLRRLKNLGIKVALDDFGSGYSSLSYLRRFPFDTLKVDRDFLSDMDGNPEAEAIIVSI 684 Query: 349 IKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQG 383 I+ +L + + A G+ T E+ +L++ G QG Sbjct: 685 IQLGKALGMTIVAEGIETIEQIRFLQAHGCHRMQG 719 >UniRef50_A3UFJ0 Putative uncharacterized protein n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UFJ0_9RHOB Length = 686 Score = 87.8 bits (216), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 66/231 (28%), Positives = 110/231 (47%), Gaps = 11/231 (4%) Query: 176 FHPIVDPLSRRIIAFEAIVQ-----KNEDSPSAIAVGQRKDGEIYTADLKSKALAFTMAH 230 + P +D S + +EA+V+ + SP+ +G I L L T Sbjct: 439 YQPQIDLKSGEVCGYEALVRWPHPVRGMISPAEFVPLAEANGLI--GRLGDWVLETTCEE 496 Query: 231 ALEL-GDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFA 289 + G ++INL + L N+P V +L + + L P Q+ +E TE+ +I + Sbjct: 497 VAQWPGAPKVAINLSAIQL-NDPHLVGKVLQAMVSTGLSPSQLEIELTETALIHDLGQSL 555 Query: 290 EAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAII 349 ++ +KA G+S+A+D FG G++ L L RF D+IK+ + + G +A+I A++ Sbjct: 556 NVLRRIKALGVSMALDDFGTGYSALETLRRFPFDKIKLDKGFTDGLSDGGRSRAVISAVV 615 Query: 350 KCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK--AKLNGIPSIA 398 +L+I V A GV T ++ L G E QG L + +NG P A Sbjct: 616 TLAHNLDIPVLAEGVETADQLDLLNMMGCEQAQGYLIGRPAPSVNGQPPAA 666 >UniRef50_B0ML09 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0ML09_9FIRM Length = 919 Score = 87.8 bits (216), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 64/228 (28%), Positives = 111/228 (48%), Gaps = 11/228 (4%) Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTADLKS--KALAFTMAHA 231 + F PIV + + A+EA+++ SP I R+ G +Y + + L A+ Sbjct: 314 YCFQPIVSTVDGSVYAYEALMRPKNSSPLEILRIAREHGRLYDIERLTFENVLEIISANR 373 Query: 232 LELGDKMISINLLPMTLVNEPDAVSFLLNEI--KANALVPEQIIVEFTESEVISRFDEFA 289 G+K I IN +P +++ E D N + K ++P Q+++EFTE ++ D+ A Sbjct: 374 ARFGEKKIFINSIPDSMITEYD-----FNRLCEKYGNIMP-QLVIEFTEQADLTG-DKIA 426 Query: 290 EAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAII 349 K+ G +AID +G+G++ + QPD IK+ + LI +++ + +Q + II Sbjct: 427 SLRHLFKSKGCMIAIDDYGSGYSNTAAVLSLQPDVIKVDRSLIADINTNVKKQHFLTGII 486 Query: 350 KCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSI 397 I+V A GV T +E G++ QG AK + +P I Sbjct: 487 DFARLNNIKVLAEGVETYDEMSVTIRRGVDYIQGFYTAKPQKEIVPDI 534 >UniRef50_A5ETG3 Diguanylate cyclase/phosphodiesterase n=6 Tax=cellular organisms RepID=A5ETG3_BRASB Length = 671 Score = 87.4 bits (215), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 68/222 (30%), Positives = 105/222 (47%), Gaps = 11/222 (4%) Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTAD--LKSKALAF 226 AF PIVD S R FE + + SPSA + G I T L KALA Sbjct: 422 LAFQPIVDAASARTTGFEVLARWRSPKLGLVSPSAFIPAAERIGVIRTLTRVLLVKALA- 480 Query: 227 TMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFD 286 A D +S NL + + PD + L++ I A+ + P +I E TE+ V F Sbjct: 481 --AARTWPEDIRMSFNLSAHDICS-PDGILPLISVIHASGVPPRRIEFEITETAVTFDFV 537 Query: 287 EFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQ 346 ++I +LKA G +++D FG G++ L + R D++K+ + + +V+ + II+ Sbjct: 538 HAEQSISALKAIGCGISLDDFGTGYSSLSHVHRLPLDKLKVDRSFVHDVNANPISHKIIK 597 Query: 347 AIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 ++ C +EI GV T E+ L G + QG FA+ Sbjct: 598 SLTGLCADMEISCVVEGVETKEQLDSLRRLGADYIQGYYFAE 639 >UniRef50_Q0G5H0 GGDEF family protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G5H0_9RHIZ Length = 684 Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 49/152 (32%), Positives = 86/152 (56%), Gaps = 5/152 (3%) Query: 239 ISINLLPMTLVNE--PDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLK 296 +++NL P +++ P +V +LNE L P ++ +E TE+ +I + + L+ Sbjct: 515 VAVNLSPAQMMDRRLPKSVKSILNE---TGLDPARLELEITETSLIGNDVQALAVLNELR 571 Query: 297 AAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLE 356 A GI++++D FG G++ L L RF +RIKI + I + AI+QAI K SL Sbjct: 572 AMGIAISLDDFGTGYSSLSYLHRFPINRIKIDRSFIDRIPTDVDSAAIVQAIAKLGGSLG 631 Query: 357 IQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 ++++A G+ E+W + ++ G + QG LF+K Sbjct: 632 MKITAEGIENEEQWSFSKTEGCDHLQGYLFSK 663 >UniRef50_C9Q762 Putative uncharacterized protein n=1 Tax=Vibrio sp. RC341 RepID=C9Q762_9VIBR Length = 294 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 60/218 (27%), Positives = 109/218 (50%), Gaps = 3/218 (1%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDSP--SAIAVGQRKDGEIYTADLKSKALAFTMAHALE 233 F PIV S +++ +E++ + + SP SA A+ + + +L+ + A Sbjct: 24 FQPIVHLASEQVLGYESLSRGPKQSPLHSANALFEAAEQCHRLPELEKICVHKAAAAWST 83 Query: 234 LG-DKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAI 292 G + + INL P L++ L ++ + L P Q++ E +E + +E +I Sbjct: 84 FGLNAQLFINLSPDMLLHSQHHQWELPQLMQRHHLSPHQVVFEISERTPALQLEELKSSI 143 Query: 293 KSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCC 352 L+A G S+AID G+G++GL L S QPD +KI + I N+ + + ++++++ Sbjct: 144 HHLQAQGFSIAIDDMGSGYSGLKLWSELQPDFVKIDRYFIHNIDSNPIKLKFVRSLVQLS 203 Query: 353 TSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 L Q+ A GV T E + + GI++ QG LF + Sbjct: 204 QQLGCQLIAEGVETRSELLVIADLGIDLVQGYLFGHPQ 241 >UniRef50_A7GAB5 Multisensor diguanylate cyclase/phophodiesterase n=11 Tax=Clostridium RepID=A7GAB5_CLOBL Length = 892 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 60/215 (27%), Positives = 106/215 (49%), Gaps = 8/215 (3%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNED----SPSAIAVGQRKDGEIYTADLKSKALAFTMAHA 231 F PI + +IIA E++V+ D SP+ + GEI D A + + Sbjct: 661 FQPIYHLKTSKIIAMESLVRWKFDNKIISPNQFIPLAKNIGEIANIDNWVLNKACSQCNL 720 Query: 232 LELGDK---MISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEF 288 + + +S+N+ + + + V +LN ++ L P + +E TE E + D Sbjct: 721 WQKQNNKPLYVSVNI-SFKQMKDKNFVDNVLNILRTTKLEPSYLCLEITEDEAMEDVDLS 779 Query: 289 AEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAI 348 + +++LK GI +++D FG G++ L +++ D IKI + +I N+HK I+++I Sbjct: 780 IKTLEALKRHGIKISLDDFGTGYSSLSYVTKLPIDNIKIDKSIIKNIHKDNKSLQIVKSI 839 Query: 349 IKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQG 383 I SL+I + A GV T E+ L+ G + QG Sbjct: 840 ILMSKSLDINIVAEGVETIEQLEILQELGCDFIQG 874 >UniRef50_Q08UR4 Diguanylate phosphodiesterase n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q08UR4_STIAU Length = 364 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 66/223 (29%), Positives = 107/223 (47%), Gaps = 11/223 (4%) Query: 176 FHPIVDPL-SRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTMA 229 F PIV +RRI A EA+++ E PS + R ++ DL ++A A A Sbjct: 133 FQPIVHANDTRRIFAHEALMRGVEQDGSFVPPSKMMETARGADMLFQLDLAARAAAIREA 192 Query: 230 --HALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDE 287 H L D + IN P + + + ++ IK L P +++ E ES+ Sbjct: 193 VRHGL---DGALFINFTPTAIYDPAYCLRSTVSVIKDAGLEPRKVVFEVIESDHAQDTRH 249 Query: 288 FAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQA 347 I + AG VA+D GAG + L L+ + +PD +K+ ELI N+H+ + +I Q Sbjct: 250 LRAIIDFYRKAGFLVALDDLGAGHSSLNLIHQLRPDIMKLDMELIRNIHEDEYKASITQK 309 Query: 348 IIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 +++ L I A G+ T EE W+ + G++ QG L A+ + Sbjct: 310 LLEIAQKLNILTVAEGIETLEELRWVRAHGVDYLQGYLIARPQ 352 >UniRef50_A1SXC8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SXC8_PSYIN Length = 632 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 55/217 (25%), Positives = 100/217 (46%), Gaps = 5/217 (2%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDS----PSAIAVGQRKDGEIYTADLKSKALAFTMAHA 231 F PIV+ + R I +EA+++ +S P A+ + + +L + L+ Sbjct: 54 FQPIVENIERNIFGYEALIRGPFNSQLYSPIALFAAAKDQSRLVELELLCRELSILQFKK 113 Query: 232 LELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEA 291 L L K+ +N P TL L +K L P ++++E TE + ++ +A Sbjct: 114 LNLQGKLF-LNASPETLFQPNFRSGQTLKLLKKIDLDPSRVVIELTEHSPLENYEVIRDA 172 Query: 292 IKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKC 351 +K K G +A+D G+G++GL +PD +KI + + ++ +Q + +I Sbjct: 173 LKHYKEMGFEIAMDDLGSGYSGLRAWYELRPDYVKIDRHFMCDIDSDKVKQQFVLSIKNI 232 Query: 352 CTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 L +V A GV T E+ ++E G+ QG F + Sbjct: 233 AQELGCKVIAEGVETANEFRFIEKIGLRFCQGYYFKR 269 >UniRef50_Q21G77 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21G77_SACD2 Length = 878 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 46/148 (31%), Positives = 84/148 (56%), Gaps = 1/148 (0%) Query: 236 DKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSL 295 D I++N+ P L+ +P + L N I+ + + P +I+E TE+ ++ ++ +A+ L Sbjct: 700 DAKIAVNVSPR-LLRDPYFIRGLANSIQDSKIDPTSVIIEITETALLEHSEQTTDALNGL 758 Query: 296 KAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSL 355 K G+++++D FG GF+ L L R+ D+IKI + + N+ K +AI++A+I SL Sbjct: 759 KRIGVAISLDDFGTGFSSLTHLKRYPIDQIKIDRSFVQNLLKDSGDKAIVKAVIVLAKSL 818 Query: 356 EIQVSAMGVATPEEWMWLESAGIEMFQG 383 ++ V A GV +L S + +QG Sbjct: 819 KLTVVAEGVEDKATLDYLASLNCDEYQG 846 >UniRef50_Q0C2A3 Putative sensory box-containing diguanylate cyclase n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C2A3_HYPNA Length = 792 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 59/220 (26%), Positives = 110/220 (50%), Gaps = 9/220 (4%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQ-----RKDGEIYTADLKSKALAFTMAH 230 F PIVD + + +A E +++ + G+ ++G I + + +A Sbjct: 543 FQPIVDATTHKTVACETLLRWQHPERGLVYPGEFIEHAEENGLI--TRMGEWVIRAALAE 600 Query: 231 ALELGDKM-ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFA 289 A L + + I +N+ P+ V+ S ++N I A+ + P ++ +E TE+ ++S + Sbjct: 601 ATRLPEHVRICVNISPLQ-VHSASLASTIVNAIAASNMDPSRLELEITETALMSNTEFTL 659 Query: 290 EAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAII 349 + L++ G+ +A+D FG GF+ L L F DRIKI + ++++ QAI ++++ Sbjct: 660 RRLHQLRSLGVRIALDDFGTGFSSLNHLRSFPFDRIKIDRTFVSDIETRADSQAITKSMV 719 Query: 350 KCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 SL +Q +A GV T + +L G E QG F+ A Sbjct: 720 SLARSLGMQCTAEGVETSLQAEYLSKLGCEELQGYFFSHA 759 >UniRef50_Q07VI3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=10 Tax=Bradyrhizobiaceae RepID=Q07VI3_RHOP5 Length = 750 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 48/155 (30%), Positives = 86/155 (55%), Gaps = 1/155 (0%) Query: 236 DKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSL 295 D I+INL P+ + +S +++ +K + L P+++ +E TE+ ++ + + + +L Sbjct: 569 DVRIAINLSPLQF-RVGNLLSVVMDALKQSGLSPKRLELEITETLLLEKSSQVIATLHAL 627 Query: 296 KAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSL 355 +A G +++D FG G++ L L F D+IKI Q + V + QAI+++II L Sbjct: 628 RALGARISMDDFGTGYSSLSYLRSFPFDKIKIDQSFVRGVCDNRELQAIVRSIISLGMGL 687 Query: 356 EIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 + ++A GV T E WL + G QG LF+ A+ Sbjct: 688 GVTITAEGVETEAELNWLRAEGCHEAQGFLFSPAR 722 >UniRef50_Q2JVC4 EAL domain protein n=1 Tax=Synechococcus sp. JA-3-3Ab RepID=Q2JVC4_SYNJA Length = 356 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 15/225 (6%) Query: 176 FHPIV---DPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFT 227 F PIV DP ++ EA+V+ + P + R+ G +Y DL ++ A Sbjct: 127 FQPIVRARDPAW--VVGHEALVRGLDREGKVIGPDLLFATAREAGLLYHLDLAARRTAIA 184 Query: 228 MA--HALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 A H LE GD + IN P + + + + I + PE+++ E ES+ Sbjct: 185 AATQHRLE-GD--LFINFSPTAIYDPAFCLRSTVWAISRAGIPPERVVFEVNESDRSPDL 241 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 D ++ + AG VA+D GAG+ L LL R QPD IK+ +ELI V + I Sbjct: 242 DHLQWILRFYRQAGFRVALDDLGAGYGSLNLLHRLQPDVIKLDRELIRGVDGDPYKAVIA 301 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 Q +++ L I A G+ T EE W+ G+++ QG A+ + Sbjct: 302 QKVLELAQELGIVTLAEGIETAEELQWVRDHGVDLVQGFFIARPQ 346 >UniRef50_B6BNY2 Ggdef domain protein n=2 Tax=Campylobacterales bacterium GD 1 RepID=B6BNY2_9PROT Length = 744 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 62/228 (27%), Positives = 112/228 (49%), Gaps = 11/228 (4%) Query: 171 NDHFA--FHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTAD---LK 220 N+ F + P +D + R++ EA+V+ N + P K+G I D +K Sbjct: 503 NEEFVVYYQPQMDGRTDRLVGMEALVRWNHPTLGLVQPYKFIPIAEKNGLIVQIDQWVMK 562 Query: 221 SKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESE 280 S F + L ++++NL + + + D + + N +K+ PE I +E TES+ Sbjct: 563 SAMTQFVAWYKDGLNPGVLAMNL-AVKQLQKKDFIDTMSNLLKSTQCKPEWIELEVTESQ 621 Query: 281 VISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGP 340 +++ E + +K + GI +A+D FG G++ L L R D++KI + I ++ Sbjct: 622 IMTNPQEAIKILKQISEMGIELAVDDFGTGYSSLSYLKRLPIDKLKIDRTFIQDLPDDEE 681 Query: 341 RQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 I +++I SL ++V A GV T E+ +L G + QG L++K Sbjct: 682 DVGITKSVIALSKSLNLKVIAEGVETDEQKNFLVENGCQNIQGYLYSK 729 >UniRef50_D1U5S7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U5S7_9DELT Length = 857 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 65/228 (28%), Positives = 106/228 (46%), Gaps = 17/228 (7%) Query: 175 AFHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQ-----RKDGEIYTAD--------LKS 221 A+ PIV +RR+ FEA+V+ I G G IY D + Sbjct: 615 AYQPIVCLDTRRVCGFEALVRWRHPEHGVILPGDFISLAEDTGLIYAIDNFVLVAACAQV 674 Query: 222 KALAFTMAHALELGDKMISINL-LPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESE 280 K T H L +++++N+ + +P +S + + + L P+ + +E TES Sbjct: 675 KLWQTTFGH---LMGELLTLNINISGKHFGQPMLLSQVTRALDDSGLNPQALNIEITESA 731 Query: 281 VISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGP 340 ++ E +K LK+ G V ID FG G++ L L RF D +K+ + I V + Sbjct: 732 LMDNPAVAEEVLKQLKSLGAKVCIDDFGTGYSSLSYLQRFPIDVVKVDRSFIDGVEGNLD 791 Query: 341 RQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 QAI++ + SL +++ A GV TP + +LE+ G QG LF + Sbjct: 792 SQAIVRTVFSLGESLGLKIVAEGVETPAQLAFLENEGCRYVQGFLFYR 839 >UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PY13_9BACT Length = 857 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 64/222 (28%), Positives = 105/222 (47%), Gaps = 9/222 (4%) Query: 176 FHPIVDPLSRRIIAFEAIV-----QKNEDSPSAIAVGQRKDGEIYTADLKSKALAFTMAH 230 + P V+ + R++ EA++ +K SP+ G+I D A Sbjct: 619 YQPQVNIATGRLVGMEALLRWKHPKKGLISPAEFIPLAEDTGQIVPIDFWVLHTACKQNM 678 Query: 231 ALE---LGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDE 287 A + L I++N+ T E + + F+ N + + P+ + +E TE I Sbjct: 679 AWQRAGLPSVPIAVNISGHTFGRE-NLIDFVNNVLHDTRMSPDALDLEITEGIAIQNLQT 737 Query: 288 FAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQA 347 + LK+ GI + ID FG GF+ L LS+F ++KI I N+HK AI++A Sbjct: 738 TIYKLNKLKSLGIQITIDDFGTGFSSLSYLSKFPIQKLKIGMTFIHNLHKDPTNSAIVKA 797 Query: 348 IIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 +I SL++ V A GV T E++ +L+ + FQG L +KA Sbjct: 798 VIAMAKSLQLTVIAEGVETDEQFEFLQGLQCDEFQGYLCSKA 839 >UniRef50_Q5QW01 Intracellular signaling protein (GAF,PAS,GGDEF,EAL domains) n=1 Tax=Idiomarina loihiensis RepID=Q5QW01_IDILO Length = 766 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 55/169 (32%), Positives = 87/169 (51%), Gaps = 2/169 (1%) Query: 235 GDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKS 294 G K +S+N P+ E D VS ++ + P +I VE TE+ +++ AE ++ Sbjct: 593 GIKSVSVNFSPIQFYRE-DFVSKTKAILEQFDIKPGEITVEITENVLVNDTQRIAELLQQ 651 Query: 295 LKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTS 354 L+ G+ VAID FG+GFA L L+ +++KI + I N+H++ AI I+ Sbjct: 652 LRDLGLDVAIDDFGSGFASLRYLNMLPVNKLKIDRSFIENIHENSHNAAITCGILSMVAG 711 Query: 355 LEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEKK 403 + I+ A GV EE +L G QG LF+K K G + W E++ Sbjct: 712 IGIETVAEGVEKEEECAYLVEHGCHFMQGFLFSKPKPLG-ELLKWAERQ 759 >UniRef50_D0XT35 Diguanylate cyclase/phosphodiesterase n=1 Tax=Brevundimonas subvibrioides ATCC 15264 RepID=D0XT35_9CAUL Length = 744 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 53/168 (31%), Positives = 88/168 (52%), Gaps = 5/168 (2%) Query: 225 AFTMAHALE----LGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESE 280 AFT+ A E D ++N+ + L +P +L + P I +E TE Sbjct: 544 AFTLRRAFEDSLRWPDLKTAVNISALQL-RDPGFPDRILAIAAETGVSPSGIELELTEGV 602 Query: 281 VISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGP 340 +I R + + +LK AG S+AID FG G++ L LSRF +IKI + + ++ +S Sbjct: 603 LIDRGKGASTRLAALKDAGFSIAIDDFGTGYSSLSYLSRFPIGKIKIDRSFVVDMGRSQC 662 Query: 341 RQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 ++ +I++ SL ++V A GV TP++W+ L + G FQG L ++ Sbjct: 663 ADVLVSSILQLGRSLNMRVIAEGVETPDQWLRLAAVGCNEFQGYLASR 710 >UniRef50_A1WT41 Diguanylate phosphodiesterase n=1 Tax=Halorhodospira halophila SL1 RepID=A1WT41_HALHL Length = 357 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 60/220 (27%), Positives = 108/220 (49%), Gaps = 9/220 (4%) Query: 176 FHPIVDPL-SRRIIAFEAIVQKNEDSPSAIAVG------QRKDGEIYTADLKSKALAFTM 228 + PIV+ ++R+ A+E +++ + I G + D E Y D ++ A Sbjct: 132 YQPIVEAREAQRVYAYECLMRGVDADGGTIPPGSMFRAAELADLEFYL-DRLARVAAIRD 190 Query: 229 AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEF 288 +HA + + + IN P + + + + ++ L P +I+ E ESE I+ Sbjct: 191 SHAQGVQENLF-INFRPTAIYDPAFCLRTTVGAVEKLGLDPRRIVFEVVESEAITDHRHL 249 Query: 289 AEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAI 348 + + G +A+D GAG+ L LL +PD +KI +ELI +VH + + I++A+ Sbjct: 250 RHIVDEYRQGGFRIALDDLGAGYGSLNLLKDLEPDFVKIDRELIRHVHHNPGQATIVEAM 309 Query: 349 IKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 + +L I G+ EE+ WL +AGI++ QG FA+ Sbjct: 310 VSMARNLGITTVGEGIEEREEFEWLRAAGIDLVQGFYFAR 349 >UniRef50_Q5QVU6 Signaling protein (EAL,CBS,GGDEF domains) n=2 Tax=Idiomarina RepID=Q5QVU6_IDILO Length = 592 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 60/220 (27%), Positives = 106/220 (48%), Gaps = 11/220 (5%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDSPS-------AIAVGQRKDGEIYTADLKSKALAFTM 228 F P++D +I EA+++ + P ++A + E+ A +S A+ Sbjct: 23 FQPVMDTSRGIVIGHEALIRGPKGHPLEFPDRLFSLASQAQLLSELELA-CRSAAMEAFQ 81 Query: 229 AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEF 288 +A++ G +++N P L ++ L + + PEQI++E +E I Sbjct: 82 KNAMQ-GKLFLNVN--PNVLQDDSHPHGSTLRLSQQFGIAPEQIVIEISERYPIEDTKNL 138 Query: 289 AEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAI 348 AI + G +AID GAG++GL L S +PD +KI + I ++ KS ++ +Q+I Sbjct: 139 KHAIIHYQKLGFMIAIDDLGAGYSGLKLWSELRPDYVKIDRYFIHSIEKSSVKREFVQSI 198 Query: 349 IKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 + TSL +V G+ TP+E L+ G+ QG L + Sbjct: 199 LSLATSLRTKVVVEGIETPDELEQLQVMGVNYCQGFLLGR 238 >UniRef50_Q47C60 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Rhodocyclaceae RepID=Q47C60_DECAR Length = 714 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 48/150 (32%), Positives = 79/150 (52%), Gaps = 1/150 (0%) Query: 239 ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAA 298 +++NL L EP + + + + L PE + +E TES ++ + +KS+KA Sbjct: 550 VAVNLSARQL-REPGLPGLVADALAVSGLPPECLELEVTESMIMGDMEHNIRVLKSIKAL 608 Query: 299 GISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQ 358 G+ +A+D FG G++ L L R D +KI + ++ ++ G AI AII +L++ Sbjct: 609 GVRIAVDDFGTGYSSLAYLQRLPIDTLKIDRSFVSGCNRGGKAMAIPHAIIFLGKTLDLH 668 Query: 359 VSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 + A GV T EE L G FQG LF++ Sbjct: 669 IVAEGVETDEERAILAVCGCNEFQGYLFSR 698 >UniRef50_Q981Y4 Mlr9186 protein n=1 Tax=Mesorhizobium loti RepID=Q981Y4_RHILO Length = 653 Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 73/247 (29%), Positives = 123/247 (49%), Gaps = 24/247 (9%) Query: 167 SPTINDHF--AFHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTADLKSKAL 224 S ND AF P +D S RI FEA+++ + AI + + + AL Sbjct: 406 SALANDELWLAFQPFLDLGSERIRGFEALLRWQHPTLGAIPPSE------FIPIAEETAL 459 Query: 225 AFTMAH-ALELG---------DKMISINLLPMTLVNEP--DAVSFLLNEIKANALVPEQI 272 T+ H A++ D +S+NL + L ++ D + L+E L P+++ Sbjct: 460 IHTIGHWAVKTACLAAVHWPRDLRVSVNLSAVQLKDKALLDGIVMALSE---TGLEPKRL 516 Query: 273 IVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELI 332 VE TES +IS F++ ++SL ++VA+D FG GF+ L L + R+KI + + Sbjct: 517 EVEITESVLISDFEDAISLLQSLSFLSVTVALDDFGTGFSSLTYLRKLPLSRLKIDRSFV 576 Query: 333 TNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK-AKL 391 ++ AI++++++ L I+V+A GV TPE+ +L G + QG L K ++ Sbjct: 577 QDMLADADCAAIVRSLVQLAHELRIEVTAEGVETPEQLDYLRRVGCDEAQGYLIGKPVRI 636 Query: 392 NGIPSIA 398 + IP IA Sbjct: 637 DDIPGIA 643 >UniRef50_C5V2W0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V2W0_9PROT Length = 1275 Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 65/222 (29%), Positives = 108/222 (48%), Gaps = 13/222 (5%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQ-----RKDGEIY---TADLKSKALAFT 227 + P VD ++ +II EA+++ N I+ G+ + G I T ++ Sbjct: 905 YQPQVDIITGQIIGAEALIRINHPERGIISPGEFISVAEETGLIIPMGTWVIREACRQMQ 964 Query: 228 MAHALELGDKMISINLLPMTLVNE--PDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 H + + I+INL P+ L P+ VS L++ NA E +EFTES ++ Sbjct: 965 QWHLDKNIELTIAINLSPLQLHQSDLPEIVSLALHDSGLNARYLE---LEFTESAIMKNV 1021 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 E + KA G+ ++ID FG G++ L L +F D++KI Q ++N+ + AI+ Sbjct: 1022 RETVAIMNKFKAMGLHLSIDDFGTGYSSLSYLKQFPVDKLKIDQSFVSNITQDPNDAAIV 1081 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFA 387 QAII +L + A GV T + +L S + QG L++ Sbjct: 1082 QAIIALGRTLGMTTIAEGVETEAQLGYLRSVNCKEMQGYLYS 1123 >UniRef50_A4A5P4 Sensory box/GGDEF family protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4A5P4_9GAMM Length = 353 Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 57/221 (25%), Positives = 112/221 (50%), Gaps = 10/221 (4%) Query: 176 FHPIVDPLSRRIIAFEAIV-----QKNEDSPSAIAVGQRKDGEIYTAD---LKSKALAFT 227 + P V+ L+ +++ EA+V ++ SP+ G+I LK A Sbjct: 108 YQPQVETLTGAVVSLEALVRWKHPERGMISPADFIPVAESTGQIIELGEWVLKEVARHCV 167 Query: 228 MAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDE 287 ++ L + +N+ P+ N+PD + ++ + + L P+++ +E TES +++ + Sbjct: 168 YWDSIGLASFRVCVNISPLQF-NQPDLLHYVKGFLSRSGLDPQRLELELTESAIMTDGES 226 Query: 288 FAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQA 347 + LK+ G+ +A+D FG G++ L L RF + +KI Q + +++ S AI+ A Sbjct: 227 NILKLSQLKSLGLDLAVDDFGTGYSSLSYLRRFPINTLKIDQSFVADMN-SADGAAIVDA 285 Query: 348 IIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 II +L ++ A G+ T E+ +L G+++ QG FA+ Sbjct: 286 IIALAKTLNMRSIAEGIETEEQLAYLAERGVDLMQGFYFAR 326 >UniRef50_C8WCF5 Diguanylate cyclase/phosphodiesterase n=4 Tax=Zymomonas mobilis RepID=C8WCF5_ZYMMN Length = 441 Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 68/223 (30%), Positives = 111/223 (49%), Gaps = 19/223 (8%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDSPSA--------IAVGQRKDGEI-YTADLKSKAL-- 224 F PI+D + II FE++ + DSP I V ++ I T L KAL Sbjct: 209 FQPIIDSRNGGIITFESLAR--WDSPGLGRIAPDKFIQVAEQTGAIIRLTPILFKKALNE 266 Query: 225 AFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISR 284 A H+++L S NL + +E ++ LL+ +K + + PE+I E TE+ V+ Sbjct: 267 AKKWPHSIKL-----SFNLSAHDISHEKQ-INLLLDILKQSNIDPERIEFELTETAVMHN 320 Query: 285 FDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAI 344 F + +K L+A G S+A+D FG G++ L L F ++IKI + +TN+ + I Sbjct: 321 FAAAFDNVKKLQAVGASIALDDFGTGYSSLSHLQNFPLNKIKIDRSFVTNLEYNNRNYKI 380 Query: 345 IQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFA 387 I++II C + + A GV E+ L G+ + QG ++ Sbjct: 381 IKSIIILCREIGLDCVAEGVEDKEKVDLLAHLGVYLIQGYYYS 423 >UniRef50_A5ERD3 Diguanylate cyclase/phosphodiesterase n=12 Tax=Bradyrhizobiaceae RepID=A5ERD3_BRASB Length = 902 Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 48/150 (32%), Positives = 82/150 (54%), Gaps = 1/150 (0%) Query: 239 ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAA 298 +++NL P V+ D V+ + + + L P ++ +E TE +I FD ++ LKA Sbjct: 728 VAVNLSPAQFVH-GDLVALVHSILLETGLSPGRLELEITEGVLIEDFDRGVALLRRLKAL 786 Query: 299 GISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQ 358 G+ V++D FG+G++ L L F D+IKI + + N+ ++ AII+A+I + + Sbjct: 787 GVRVSMDDFGSGYSSLSYLQAFPFDKIKIDRAFVMNLGRNPQSAAIIRAVIGLGHGMNMS 846 Query: 359 VSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 + A GV TPE+ +L G + QG L K Sbjct: 847 IVAEGVETPEQLGFLAEQGCDSVQGYLLGK 876 >UniRef50_B8KJL8 Response regulator/sensory box/ggdef domain/eal domain protein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KJL8_9GAMM Length = 660 Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 49/150 (32%), Positives = 86/150 (57%), Gaps = 1/150 (0%) Query: 239 ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAA 298 ++IN+ + L +PD V+ LL IK L PE + VE TE+ + + +I++LK+A Sbjct: 486 LNINVDVLQLY-QPDFVADLLAWIKHAKLQPEHVCVEITETSLENNVQLLVGSIRALKSA 544 Query: 299 GISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQ 358 G+ ++ID FG G+A L L + D+IKI + I+N + + ++++I+ + ++ Sbjct: 545 GVRLSIDDFGTGYASLHRLLELEFDQIKIDRIYISNALRDDKHRGVLRSIVALGRAASME 604 Query: 359 VSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 V A GV T E+ + GI++ QG +F K Sbjct: 605 VLAEGVETEEQARFCRECGIDLLQGFIFQK 634 >UniRef50_B5YH86 EAL domain, putative n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YH86_THEYD Length = 249 Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 3/215 (1%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDSPSA--IAVGQRKDGEIYTADLKSKALAFTMAHALE 233 F PI S +I +E++ + S + + + +K+G I+ D+ + A A Sbjct: 24 FQPIFSSKSGKIFGYESLTRHISMSLNIKDLFLEAKKNGSIFILDMICRRNAIKKASEQN 83 Query: 234 LGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIK 293 + + IN+ P TL + + ++I++E TE I ++ F +++ Sbjct: 84 INSYLF-INICPETLFYPQHEIGITDRFSEEFGFPKDKIVLEITEQSAIENYEVFIKSVS 142 Query: 294 SLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCT 353 K G +AID FGAGF G LLS +PD +KI + I + ++ ++ I+ + C Sbjct: 143 YYKKRGYKIAIDDFGAGFGGPKLLSILEPDIVKIDRHFINTMEENHFSKSFIEFTVSVCH 202 Query: 354 SLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 L I V A G+ T + +AG+++ QG K Sbjct: 203 RLNIMVVAEGIETAIQLKETVNAGVDLLQGFYLGK 237 >UniRef50_B7DP82 Diguanylate phosphodiesterase n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DP82_9BACL Length = 147 Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 43/131 (32%), Positives = 74/131 (56%) Query: 262 IKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQ 321 ++A LVPEQI+ E +E I +++F + + G +AID FGAG++GL+ L + + Sbjct: 15 LEAVNLVPEQIVFEVSERHAIEDYEQFLSLLNHYREQGYHIAIDDFGAGYSGLVTLVQIK 74 Query: 322 PDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMF 381 PD IKI ++LI +++ ++ +++A + V A G+ T EW +S G+ Sbjct: 75 PDFIKIDKQLIKELNQDFLKRRVVEATCHIAAAFSGIVIAEGIETEAEWAEAKSCGVHYG 134 Query: 382 QGDLFAKAKLN 392 QG LF + L+ Sbjct: 135 QGFLFGRPSLS 145 >UniRef50_B1Y3M1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y3M1_LEPCP Length = 745 Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 58/171 (33%), Positives = 88/171 (51%), Gaps = 10/171 (5%) Query: 236 DKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSL 295 D ++S+N+ L +EP V ++ + P ++ +E TE+ V+ D+ +K L Sbjct: 580 DLVLSVNVSAREL-HEPQFVERVIEILACTGARPARLKIELTENAVLDHVDDSIAKMKRL 638 Query: 296 KAAGISVAIDHFGAGFAGLLLLSRFQPDRIKIS----QELITNVHKSGPRQAIIQAIIKC 351 KA GI +A+D FG G L LL R D +KI Q+L+T+ H + AI + I Sbjct: 639 KAHGIRLALDDFGTGHGSLSLLKRLPLDELKIDRTFVQDLLTDTHDA----AIARTIAAL 694 Query: 352 CTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFA-KAKLNGIPSIAWPE 401 +L I V A GV TP + L + G +FQGDLF A L + +A P+ Sbjct: 695 GLNLGISVVAEGVETPAQRDLLIACGCRIFQGDLFGPPAALEALARMAMPK 745 >UniRef50_B0TGE2 Signal transduction protein, putative n=2 Tax=Heliobacteriaceae RepID=B0TGE2_HELMI Length = 780 Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 58/216 (26%), Positives = 105/216 (48%), Gaps = 7/216 (3%) Query: 173 HFAFHPIVDPLSRRIIAFEAIVQKNEDS----PSAIAVGQRKDGEIYTADLKSKALAFTM 228 H + P++ II +EA+ + DS PS + K +Y + + + A Sbjct: 206 HVVYQPLLSLEKGEIIGYEALCRGPVDSYFASPSVLFPLAEKADLLYPLERQIREKAIAE 265 Query: 229 AHALELGDKMISINLLPMTLVNEPD-AVSFLLNEIKANALVPEQIIVEFTESEVISRFDE 287 L L D+++ +N+ P ++V +P+ A I + L P I+ E TE I F Sbjct: 266 CGEL-LRDQLLFLNISP-SVVKDPEFAQGNTRRLIAEHGLRPHNIVFEITERTAIDDFGS 323 Query: 288 FAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQA 347 F + +K + G VA+D GAG++ L ++ QPD IKI L+ ++ S +QA+++ Sbjct: 324 FRKTLKHYREQGFRVAVDDAGAGYSSLQAIAELQPDFIKIDMSLVRDIDTSSIKQALMET 383 Query: 348 IIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQG 383 + + ++ A G+ T +E +L G+++ QG Sbjct: 384 FVTFGRKIGAKIVAEGIETEKELRFLSQIGVDIGQG 419 >UniRef50_B1M3H8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=9 Tax=Alphaproteobacteria RepID=B1M3H8_METRJ Length = 829 Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 63/219 (28%), Positives = 109/219 (49%), Gaps = 7/219 (3%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTMAH 230 + P++D S RI+AFEA+++ + SP+ + G I AF A Sbjct: 590 YQPLMDARSDRILAFEALLRWHHPEHGPVSPAEFVPLAEETGLIVPIGAWVMQTAFAEAA 649 Query: 231 ALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAE 290 ++ ++NL P+ N V + + A L P ++ +E TES +++ Sbjct: 650 TWPETIRL-AVNLSPIQFRNR-TLVETVRGALAATGLDPRRLELEITESVLLADSAANLA 707 Query: 291 AIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIK 350 + +L+ GI +A+D FG G++ L L F D+IK+ + ++ V ++ AI++A+ Sbjct: 708 TLHALRDMGIRIAMDDFGTGYSSLSYLRSFPFDKIKLDRSFVSQVGENTHCTAIVRAVAS 767 Query: 351 CCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 TSL I +A GV TPE+ L + G + QG LF++A Sbjct: 768 LGTSLGIATTAEGVETPEQLAMLRAEGYDEVQGFLFSRA 806 >UniRef50_Q30QU6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Campylobacterales RepID=Q30QU6_SULDN Length = 723 Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 63/221 (28%), Positives = 108/221 (48%), Gaps = 14/221 (6%) Query: 176 FHPIVDPLSRRIIAFEAIV--------QKNEDSPSAIAVGQRKDGEIYTADLKSKALAFT 227 F PI D + I+ +EA+V +KN SP+ K G + +F+ Sbjct: 502 FQPITDK-NGTIVKYEALVRIVEFDNGKKNILSPAEFLDISMKSGSYIKIAKEMLEQSFS 560 Query: 228 MAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDE 287 + + + IS+N LP +N P + L+ I+ P +++VE TE E + F+ Sbjct: 561 IFAS---RSEKISVNFLPNDFLN-PSIMEALIIGIEKFE-SPNRVVVEITEQEGVENFER 615 Query: 288 FAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQA 347 +K L+ GI +AID FG+G+A + + +PD +KI LI ++ + + ++Q+ Sbjct: 616 LLHVVKKLRDIGILIAIDDFGSGYANYAHILQIKPDYLKIDGSLIKDILEDNESRILVQS 675 Query: 348 IIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 I++ L I A V T E + L+S G++ FQG F + Sbjct: 676 IVRFAKELGITTVAEYVETKEIFELLKSYGVDEFQGYYFGR 716 >UniRef50_C7LSZ0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LSZ0_DESBD Length = 753 Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 54/217 (24%), Positives = 106/217 (48%), Gaps = 5/217 (2%) Query: 176 FHPIVDPLSRRIIAFEAIVQ----KNEDSPSAIAVGQRKDGEIYTADLKSKALAFTMAHA 231 F PI D + ++A+EA+ + + +SPS + + G+++ + ++ A Sbjct: 186 FQPIYDFKTGAVMAWEALARGPRGSDFESPSILFDFAEQFGQLFALEQACRSKAMETVGT 245 Query: 232 LELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEA 291 L G ++ +N+ P T+V+ A L + + L PE I+ E TE I F F + Sbjct: 246 LASGQRLF-LNIHPRTVVDPTFAPGKTLEILDKHGLRPEDIVFEITERHSIKDFTSFHKT 304 Query: 292 IKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKC 351 + ++ G +A+D G G++GL ++ +PD IK+ L+ +V K R+A+++ ++ Sbjct: 305 LDHYRSQGFKIAVDDAGTGYSGLSTVAALKPDFIKVDMSLVRDVDKDPVRRALMETMVTL 364 Query: 352 CTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 + ++ A G+ T E L G+ QG ++ Sbjct: 365 AGRIGSEIIAEGIETKGEARTLTEIGVHFGQGYYLSR 401 >UniRef50_B6FLB5 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLB5_9CLOT Length = 519 Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 67/246 (27%), Positives = 124/246 (50%), Gaps = 18/246 (7%) Query: 159 KELDSCAL-SPTINDHF-----AFHPIVDPLSRRIIAFEAIVQKNE--------DSPSAI 204 +ELD L I+D+F + PIV+ ++ +IA EA++Q + D S Sbjct: 269 RELDIIRLLKEDISDNFRAFSLKYQPIVEGETKEVIAVEALLQWDNPHIANLEYDELSKF 328 Query: 205 AVGQRKDGEIYTADLKSKALAFTMAHALELGDKMISINL-LPMTLVNEPDAVSFLLNEIK 263 R + ++ +A + L G + S+NL + +++ + + ++ +K Sbjct: 329 LEKNRLLNPVGRWMFQTGCMA--LKKWLSEGWNL-SLNLNVSYAQLSDWNYIQEIIMIVK 385 Query: 264 ANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPD 323 ++ ++PE+I++E +S IS + +A +++K +G+ + +D FGA +A + LL D Sbjct: 386 SSQVLPEKIVIEVVDSYFISDMKIYEQAFRAIKESGMKIMLDDFGADYASIGLLKNDLVD 445 Query: 324 RIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQG 383 +K+ + ++ V KS I+ I+K C +EI+V GVA EE +E + QG Sbjct: 446 IVKVDRTIVRRVVKSSFDLDFIRFIVKICHDMEIEVCLEGVAEMEELKLVEDMIFDYMQG 505 Query: 384 DLFAKA 389 DLF KA Sbjct: 506 DLFGKA 511 >UniRef50_C1SK80 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SK80_9BACT Length = 903 Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 68/237 (28%), Positives = 114/237 (48%), Gaps = 30/237 (12%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTADL---KSKALAFTMAHAL 232 F PIVD + II +EA+++ + + G+I T ++ SK+L + +L Sbjct: 682 FQPIVDTATGEIIKYEALMRI-----------ENEKGDIMTPNMFLSMSKSLKLYNSLSL 730 Query: 233 ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANAL------------VPEQIIVEFTESE 280 + +K S+N L T VN+ ++F + +I+ N + +I VE TESE Sbjct: 731 MMLEK--SLNSLSDT-VNDI-CINFDMEDIRNNKFQTYFFDIISQKNLQGRITVEITESE 786 Query: 281 VISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGP 340 I DE + I K G +A+D FG G++ + + QPD +KI + ++ SG Sbjct: 787 GIDNMDELSVFIARAKKHGCLIALDDFGTGYSNFMYILSLQPDFLKIDGSITRQINVSGR 846 Query: 341 RQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSI 397 + + I++ C I+ A V+T E + ++ G++ QG LF K N I SI Sbjct: 847 ARLLTSTIVEMCRQAGIKTVAEYVSTDEIYSTIKEVGVDYCQGYLFGKPAPNFIKSI 903 >UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q608F9_METCA Length = 965 Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 51/152 (33%), Positives = 83/152 (54%), Gaps = 5/152 (3%) Query: 239 ISINLLPMTLVNE--PDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLK 296 +++NL P+ L + P+ V LL+ + L P + +E TE+ V+ ++ ++ LK Sbjct: 796 VAVNLSPLQLQKDDFPEQVEALLSGCR---LAPGLLELELTETAVMRDVGRMSDMLRKLK 852 Query: 297 AAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLE 356 G +ID FG G++ L L+RF D++KI Q I +V + AI +AII L Sbjct: 853 ERGTRFSIDDFGTGYSSLGYLNRFPVDKLKIDQSFIRDVTRREDHAAITRAIIALAKQLH 912 Query: 357 IQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 ++V A GV T E+ +LE AG + QG F++ Sbjct: 913 LKVVAEGVETAEQLEFLERAGCDGAQGFYFSR 944 >UniRef50_A6LXC6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LXC6_CLOB8 Length = 792 Score = 84.7 bits (208), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 61/227 (26%), Positives = 114/227 (50%), Gaps = 10/227 (4%) Query: 171 NDHFA--FHPIVDPLSRRIIAFEAIVQ-KNEDSPSAIAVGQ---RKDGEIYTAD---LKS 221 N+ F + PI+D S++++ EA+++ K D + GEI D L++ Sbjct: 554 NNEFMVYYQPIMDLKSKKVLNSEALIRWKQGDRIIPPIEFIPIAKSVGEIIPIDNWMLEN 613 Query: 222 KALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEV 281 + + + + +S+N + + +P+ VS + N + A +L PE + +E TE E Sbjct: 614 ACIQCKKWNEIGSHEFSVSVNT-SYSQLKQPEFVSLVQNILDAYSLPPEYLNLEVTEDEA 672 Query: 282 ISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPR 341 + F+ ++ K+ GI +++D FG G++ L +++ D+IKI + LI N+ + Sbjct: 673 MEDFETIINILEQFKSMGIKISLDDFGTGYSSLNYVNKLPIDKIKIDKSLIMNLETNYKN 732 Query: 342 QAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 II++II SL+I++ A G+ T E+ L + QG L K Sbjct: 733 LTIIKSIINMGHSLDIKIVAEGIETKEQLRILNELKCDFIQGYLIGK 779 >UniRef50_D0SWD2 Predicted protein n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SWD2_ACILW Length = 859 Score = 84.7 bits (208), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 62/231 (26%), Positives = 111/231 (48%), Gaps = 10/231 (4%) Query: 176 FHPIVDPLSRRIIAFEAIV-----QKNEDSPSAIAVGQRKDGEIYTAD---LKSKALAFT 227 + P+V P + + EA++ Q+ SP+ + G+I + L+ L Sbjct: 620 YQPLVHPETGLVTGVEALIRWCHPQQGYISPAIFIPLAERTGQIISVGQWVLEKACLDIA 679 Query: 228 MAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDE 287 + +S+N+ P+ + L + ++ + L PE + +E TE +I+ D Sbjct: 680 EWNKTHNSQITVSVNISPLQF-RRAGFLQVLEHALELSQLPPELLKIEITEGVIINGADR 738 Query: 288 FAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQA 347 E +K+++A G+ VAID FG G++ L L R ++IK+ + I + G AI+Q+ Sbjct: 739 TIEILKAVRALGVQVAIDDFGTGYSSLSYLRRLPINQIKLDRSFIEELTLDGQDAAIVQS 798 Query: 348 IIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK-AKLNGIPSI 397 II L+++V A GV T + L G ++ QG +AK A LN + + Sbjct: 799 IIHLAHQLDLEVVAEGVETFSQASLLYQQGCDLLQGFFYAKPAPLNELKPV 849 >UniRef50_B1Z990 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylobacterium populi BJ001 RepID=B1Z990_METPB Length = 635 Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 66/222 (29%), Positives = 110/222 (49%), Gaps = 15/222 (6%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEI--YTADLKSKALAFTM 228 + PI+D + RI A+EA+ + N SP+ + + G I T L KALA Sbjct: 397 YQPIIDTVDHRIEAYEALARWNSPVIGRVSPAEFILVAEQTGLIRDLTPILFGKALA--- 453 Query: 229 AHALELG--DKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFD 286 AL D +S NL + + P +V+ L + A+ L P +I+ E TE+ ++ Sbjct: 454 --ALRTWPEDVRLSFNLSAQDIAS-PASVARLAELVVASGLDPGRIVFEVTETGLMRDLV 510 Query: 287 EFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQ 346 E ++ +LK GI +A+D FG G++ + R DR+KI + + ++ +II+ Sbjct: 511 EAHCSLATLKELGIGIALDDFGTGYSSFSYVHRLPLDRLKIDRSFVISLGDDATSLSIIR 570 Query: 347 AIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 +I+ +L + GV T ++ + L SAG QG LF+K Sbjct: 571 SIVDMSRNLGLHCVVEGVETFDQMLLLRSAGCRSMQGYLFSK 612 >UniRef50_C5SQK5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SQK5_9CAUL Length = 654 Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 66/238 (27%), Positives = 112/238 (47%), Gaps = 13/238 (5%) Query: 158 DKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDG 212 D+ L S L + + F P +D ++R ++FEA+ + + P + G Sbjct: 399 DQTLRSSDLESEL--YIVFQPQIDLKAQRTVSFEALARWQSEKLGPVRPDIFIRAAERSG 456 Query: 213 EI--YTADLKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPE 270 I T L KAL D +S NL L + P A++ + + +KA+ + P+ Sbjct: 457 LISDITLILLRKALVAVRDWPR---DMRVSFNLSARDLRSLP-AIARICDTVKASGVDPK 512 Query: 271 QIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQE 330 +I E TE+ ++S FD+ EA+ LK G +A+D FG+G++ + R D+IKI + Sbjct: 513 RIEFEITETAMLSDFDQALEALALLKGMGSRIALDDFGSGYSSFGYIHRLPVDKIKIDRS 572 Query: 331 LITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 +T + + I++ +I C +L + GV T E LE G QG F++ Sbjct: 573 FVTQLLRHDSTVKIVKTLIDLCGNLSLDHVIEGVETAAELCRLEEIGARYIQGYYFSQ 630 >UniRef50_Q2W8V6 EAL domain n=1 Tax=Magnetospirillum magneticum AMB-1 RepID=Q2W8V6_MAGSA Length = 201 Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 56/180 (31%), Positives = 84/180 (46%), Gaps = 1/180 (0%) Query: 215 YTADLKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIV 274 Y D + A +A +L L D+ +SIN LP + + + L + I Sbjct: 13 YAFDQACRVKAIDLAASLGL-DRRLSINFLPNAVYDPKACIRATLAAADRVNFPLDLITF 71 Query: 275 EFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITN 334 E TE E I+ I+ + G VA+D FGAG+AGL +L+ D +K+ L+ N Sbjct: 72 EITEDERITDTPHLLGIIEEYRRHGFRVALDDFGAGYAGLNVLAEMIVDVVKLDIALVRN 131 Query: 335 VHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGI 394 + R+ I +IK C L + V A GV +E L AG+ QG LF++ +N I Sbjct: 132 IDHDQRRRTIALGMIKVCQELGVDVVAEGVERTQELKVLRDAGVRYVQGFLFSRPAVNSI 191 >UniRef50_A5F7H4 PAS/EAL family protein n=26 Tax=Vibrio cholerae RepID=A5F7H4_VIBC3 Length = 818 Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 63/222 (28%), Positives = 108/222 (48%), Gaps = 10/222 (4%) Query: 176 FHPIVDPLSRRIIAFEAIVQ------KNEDSPSAIAVGQRKDGEIYTAD--LKSKALA-F 226 + PIVD S ++ FEA+ + + + I++ + G I D + KAL Sbjct: 435 YQPIVDSQSWSVVKFEALCRFQAPEILHASTQELISIAEEL-GLINQLDELIGGKALKDL 493 Query: 227 TMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFD 286 HAL +SIN + ++ + +++ + + + I VE TE+ Sbjct: 494 PKIHALFGHHVGVSINRSLNSDLSAEQILQSVVDMLAETPTLAKNITVELTETAYFDSQS 553 Query: 287 EFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQ 346 + E ++ L+ G++VAID FG GF+ L+ Q D +KI +E +TN+ R AI++ Sbjct: 554 QGGEVLQHLRNRGVTVAIDDFGTGFSSFSYLTECQFDYLKIDREFVTNIEVGSRRYAIVK 613 Query: 347 AIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 + +L ++V A GV T E L+S G+++ QG FAK Sbjct: 614 MMTDLAHTLGVKVVAEGVETEHEVYVLKSLGVDLLQGFFFAK 655 >UniRef50_B8GSM4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GSM4_THISH Length = 648 Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 50/150 (33%), Positives = 79/150 (52%), Gaps = 1/150 (0%) Query: 239 ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAA 298 ISINL + D V N I++ + P I +E TES ++ D ++ L A Sbjct: 486 ISINLSARQF-RQSDLVEQCRNTIRSAGIAPAYIELELTESTIMKDIDIAVGMLRQLNAL 544 Query: 299 GISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQ 358 G+ +AID FG G++ L L F D +KI + + ++ +AI+ AI+ SLE++ Sbjct: 545 GVRLAIDDFGTGYSSLNNLKHFPIDTLKIDKSFVRDIPGDRDDEAIVTAIVALAKSLELE 604 Query: 359 VSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 V A GV T E+ +L+ G E+ QG F++ Sbjct: 605 VVAEGVETREQLGFLKRLGCEIVQGYFFSR 634 >UniRef50_A8ZZG5 Diguanylate phosphodiesterase n=2 Tax=Desulfobacteraceae RepID=A8ZZG5_DESOH Length = 437 Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 63/218 (28%), Positives = 105/218 (48%), Gaps = 7/218 (3%) Query: 175 AFHPIVDPLSRRIIAFEAIVQKNED----SPSAIAVGQRKDGEIYTADLKSKALAFTMAH 230 F PIVD S +I +EA+ + E SP + + + G + D + A A Sbjct: 209 VFQPIVDLNSLEVIGYEALSRGPEGTEFASPWHLFLVASEFGLSFELDRLCRRTALEAAQ 268 Query: 231 ALELGDKMISINLLPMTLVNEPDAVSFLLNEIKAN-ALVPEQIIVEFTESEVISRFDEFA 289 L+ D+ I +N L MT +++P+ L ++ + + P+ ++ E +E I +D F Sbjct: 269 HLDT-DRKIFVNTLSMT-IHDPEFRGLYLQQLFEDLEIKPQNVVFEISEKLAIDNYDLFR 326 Query: 290 EAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAII 349 A++ GI A D G G++ L + P +K+ + V KS +Q II+A++ Sbjct: 327 GAMRDYTDVGIVHAGDDIGTGYSDLERIMELNPGFMKVDISFVKGVDKSYMKQEIIRALV 386 Query: 350 KCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFA 387 ++ QV A GV T EE+ L+ G+ QG LFA Sbjct: 387 TLSKNIGSQVIAEGVETKEEYEALKKIGVPFAQGFLFA 424 >UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3I2_DESAC Length = 791 Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 45/149 (30%), Positives = 81/149 (54%), Gaps = 1/149 (0%) Query: 239 ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAA 298 +++N+ P EP + + ++ + PE + +E TES ++ D +K LKA Sbjct: 623 VAVNISPRQF-REPGFLEMIERVVQTTGIKPEWLELEITESLLMDDIDSAINILKQLKAK 681 Query: 299 GISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQ 358 GI +AID FG G++ L L RF R+KI + + ++ +I +A+I S+ ++ Sbjct: 682 GIHLAIDDFGTGYSSLSYLKRFPLSRLKIDRSFVRDITTDDNDASITKAVIALAHSMNLK 741 Query: 359 VSAMGVATPEEWMWLESAGIEMFQGDLFA 387 V A G+ T E+ ++L+ G E+ QG L++ Sbjct: 742 VVAEGIETQEQLLFLKEKGCEVGQGYLYS 770 >UniRef50_A0Y3F7 Response regulator n=1 Tax=Alteromonadales bacterium TW-7 RepID=A0Y3F7_9GAMM Length = 668 Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 65/245 (26%), Positives = 111/245 (45%), Gaps = 15/245 (6%) Query: 160 ELDSCALSPTINDHFA--FHPIVDPLSRRIIAFEAIVQKNED------SPSAIAVGQRKD 211 EL N+ F+ F P +D + ++ E +++ E SP+ D Sbjct: 409 ELSRLLFKAIDNEEFSLCFQPKIDLKTHKVSGAEVLIRWYEPTKYGWVSPALFIPISECD 468 Query: 212 GEI-----YTADLKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANA 266 G+I + K L +E+G ++INL + +P+ + F+L + N Sbjct: 469 GQIIAISRFVISQSFKQLKQWNMQKVEVGK--LAINLSARQIKEDPEWIDFMLESLNENN 526 Query: 267 LVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIK 326 L I E TE+ ++ + I L++ G V ID FG G++ L LS+ D IK Sbjct: 527 LSASNIQFELTETYLMDDLTKCQLQITRLRSLGFEVQIDDFGIGYSSLAYLSKLSIDGIK 586 Query: 327 ISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLF 386 + +ELI+ + S Q++I+ I++ L ++V A GV T E +E G + QG F Sbjct: 587 LDKELISGLDSSLEMQSMIRNIVRMSHDLNLKVIAEGVETAHECKLVERLGCDYIQGFYF 646 Query: 387 AKAKL 391 ++ L Sbjct: 647 SRPLL 651 >UniRef50_A7IMR4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Xanthobacter autotrophicus Py2 RepID=A7IMR4_XANP2 Length = 733 Score = 84.0 bits (206), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 62/222 (27%), Positives = 111/222 (50%), Gaps = 18/222 (8%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDS-----PSA-IAVGQRKDGEIYTADLKSKALAFTMA 229 + P VD S R++ FEA+ + + + P A +AV + T+ L + A+ + Sbjct: 482 YQPQVDVESERVVGFEALARWDHPTQGRLLPGAFLAVAE-------TSRLMGRFDAYVLR 534 Query: 230 HAL----ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 AL L + +S+N+ + L + ++ + P ++ +E TES ++ Sbjct: 535 MALMEARALPEVTLSVNMSALNL-RQGAIFGMVVTALAETGFNPARLEIEITESAILDAA 593 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 + EA++ L+ G+ +A+D FG G A L+ L RF +IKI + I ++ AI+ Sbjct: 594 SDGQEALQKLRDMGVRIALDDFGTGHASLVHLRRFPITKIKIDKSFILDMATDRDASAIV 653 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFA 387 + +I+ SL I ++A GV T E+ +L + G + QG LFA Sbjct: 654 EYVIRLGRSLGITLTAEGVETREQLRFLRAFGAQQAQGYLFA 695 >UniRef50_A6B2C4 Ggdef family protein n=8 Tax=Vibrio RepID=A6B2C4_VIBPA Length = 818 Score = 84.0 bits (206), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 58/221 (26%), Positives = 113/221 (51%), Gaps = 7/221 (3%) Query: 176 FHPIVDPLSRRIIAFEAIVQ---KNEDSPSAIAVGQRKDGEIYTA--DLKSKALAFTMAH 230 F PI++ + ++ FEA+ + +N + + + +D E+ A D+ + +H Sbjct: 438 FQPIIETRTGNVVKFEALARFYHENSEYSTQEMISIIEDLELIAALDDVVCQTALKQWSH 497 Query: 231 ALEL-GDKM-ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEF 288 ++ G+ + +SIN T ++ + L+ IKA+ + P+ + +E TE+ + +E Sbjct: 498 LQKIYGENIGLSINRSLNTKLDSLQVLQRSLDLIKASDVNPKLVTIELTETAYFEQDEEH 557 Query: 289 AEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAI 348 A A++ ++ GI +AID FG G++ L Q D +KI ++ + N+H+ I++ I Sbjct: 558 AFALEQIRQEGIQIAIDDFGTGYSSFSYLEEGQFDVLKIDRKFVKNIHEGSTSYNIVKTI 617 Query: 349 IKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 L ++V A GV + E L G++ QG LF++A Sbjct: 618 TDLAHKLNVEVVAEGVESQRELEVLAGIGVDYMQGFLFSQA 658 >UniRef50_Q1QZ57 Diguanylate cyclase/phosphodiesterase n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QZ57_CHRSD Length = 605 Score = 84.0 bits (206), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 61/238 (25%), Positives = 114/238 (47%), Gaps = 7/238 (2%) Query: 155 DGSDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS----PSAIAVGQRK 210 + +D L + I+ HF PIV S R+ A+EA+ + D+ P + RK Sbjct: 23 EATDPSLSAIVREGRIDVHF--QPIVAIRSGRVFAYEALSRGPHDTVYAHPLTMFEAARK 80 Query: 211 DGEIYTADLKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPE 270 + + + A T EL D+++ IN+ P L++ L + + P Sbjct: 81 QSLLAPLEAVCRHRAITAWADQEL-DELLFINVSPEVLLDPKHRSGETLRLLTRLGIPPH 139 Query: 271 QIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQE 330 ++++E TE D AEA++ ++ G ++A+D G G+A L L S+ +PD +K+ + Sbjct: 140 RLVIELTEQSPGIDPDLMAEAVRHYQSMGFTIALDDLGEGYASLRLWSQIRPDFVKLDRH 199 Query: 331 LITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 ++ + + ++ ++A + + +V A GV EE L + G + +QG LFA+ Sbjct: 200 FVSELDRDRVKRRFVRAFLDVAHGVGSRVIAEGVEREEELDCLHALGADYYQGWLFAR 257 >UniRef50_C8WZK3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8WZK3_DESRD Length = 786 Score = 84.0 bits (206), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 60/236 (25%), Positives = 112/236 (47%), Gaps = 11/236 (4%) Query: 159 KELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDSPS-----AIAVGQRKDGE 213 +E + T+ HF PIV ++ + + +EA+ + E SP + D Sbjct: 209 REFELLVAGRTVEAHF--QPIVSLVTGQTLGWEALSRGPEGSPFRSPQFMFDFAEESD-S 265 Query: 214 IYTADLKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKAN-ALVPEQI 272 ++ + +A A L+ G K+ +N+ P T+++ P+ + AN L P+ + Sbjct: 266 LFALERACRARAIAECGPLQKGQKLF-LNIHPRTMLD-PNFTPGQTKRLLANTGLAPDDV 323 Query: 273 IVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELI 332 + E TE + F F +A+ ++ G VA+D GAG+AGL +++ +PD IK+ L+ Sbjct: 324 VFEITERHSVKDFGLFHKALDHYRSQGFKVAVDDAGAGYAGLWSIAQLRPDYIKVDMSLV 383 Query: 333 TNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 V R+A+++ + + +V A G+ + L + G+ QG LFA+ Sbjct: 384 QGVAHDPVRRALMETFVAFADKVGARVIAEGIENHTDLSSLTAMGVHCGQGFLFAR 439 >UniRef50_D1C8G6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C8G6_SPHTD Length = 760 Score = 84.0 bits (206), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 60/222 (27%), Positives = 105/222 (47%), Gaps = 11/222 (4%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQ-----RKDGEI-----YTADLKSKALA 225 + P++D +RR + EA+V+ + I+ G+ + G I + + LA Sbjct: 513 YQPVLDVRTRRPVEVEALVRWHHPERGLISPGEFIPIAEETGLIVPLGHWVLAEACRQLA 572 Query: 226 FTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 + +S+NL P + + + L P + +E TES ++ Sbjct: 573 AWRTAFPDCAPSAVSVNLSARQF-RHPSLTADIAQILAETGLPPASLKLEITESVMMDDT 631 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 EA++ LK G+ +A+D FG G++ L L RF D +KI + + +S QA++ Sbjct: 632 ASTLEALRDLKQLGVQLAVDDFGTGYSSLSYLKRFPTDAMKIDRSFARGLDQSREDQALV 691 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFA 387 +A+I +L +QV+ GV T E+ +LE G ++ QG LFA Sbjct: 692 EAMIAAANALRLQVTVEGVETEEQLEFLERVGCDLVQGFLFA 733 >UniRef50_B8KPF2 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KPF2_9GAMM Length = 609 Score = 84.0 bits (206), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 56/221 (25%), Positives = 111/221 (50%), Gaps = 10/221 (4%) Query: 176 FHPIVDPLSRRIIAFEAIV-----QKNEDSPSAIAVGQRKDGEIYTAD---LKSKALAFT 227 + P V+ ++ +++ EA+V ++ SP+ G+I LK A Sbjct: 359 YQPQVETVTGAVVSLEALVRWKHPERGMISPADFIPVAESTGQIIELGEWVLKEVARHCV 418 Query: 228 MAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDE 287 ++ L + +N+ P+ N+PD + ++ + + L P ++ +E TES +++ + Sbjct: 419 YWDSIGLASFRVCVNISPLQF-NQPDLLHYIKGFLGRSGLDPHRLELELTESAIMTDGES 477 Query: 288 FAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQA 347 + LK+ G+ +A+D FG G++ L L RF + +KI Q + +++ S AI+ A Sbjct: 478 NILKLSQLKSLGLDLAVDDFGTGYSSLSYLRRFPINTLKIDQSFVADMN-SADGAAIVDA 536 Query: 348 IIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 II +L ++ A G+ T E+ +L G+++ QG FA+ Sbjct: 537 IIALAKTLNMRSIAEGIETEEQLAYLAKRGVDLMQGFYFAR 577 >UniRef50_B8EE65 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=6 Tax=Gammaproteobacteria RepID=B8EE65_SHEB2 Length = 744 Score = 84.0 bits (206), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 53/150 (35%), Positives = 74/150 (49%), Gaps = 1/150 (0%) Query: 239 ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAA 298 + +NL M E + V L I + P+QI +E TES + F+ + + L++ Sbjct: 577 MGVNLSAMQFEQE-NIVDILKQHIADAKVPPKQIEIEVTESIAMQNFEIIRKQLNELRSK 635 Query: 299 GISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQ 358 GI +AID FG GF+ L LS+ DRIKI + I NV AI+ +II + Sbjct: 636 GIRIAIDDFGTGFSSLAYLSKLTFDRIKIDKSFIDNVTSDDGAAAIVDSIILLGQRFHMN 695 Query: 359 VSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 V A GV T E+ WL G QG +AK Sbjct: 696 VIAEGVETKEQAKWLSDRGCHDAQGYFYAK 725 >UniRef50_A5MZF0 Predicted signal transduction protein n=4 Tax=Clostridium RepID=A5MZF0_CLOK5 Length = 596 Score = 84.0 bits (206), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 5/213 (2%) Query: 175 AFHPIVDPLSRRIIAFEAIVQKNEDS----PSAIAVGQRKDGEIYTADLKSKALAFTMAH 230 + PI II +EA+ + E+S P + + + +L + A A Sbjct: 29 VYQPIASLTDGSIIGYEALSRGPENSLLQSPGKLFSAAKLHNRTWELELLCRTKAIERAS 88 Query: 231 ALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAE 290 + DK + IN+ P +E F + N + E +I E TE I + F Sbjct: 89 DIP-DDKFLFINVDPYIFKDEKFKRGFTKEFLSKNNISSEIVIFEITEKTSIEDYKNFRA 147 Query: 291 AIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIK 350 + + G +AID G+G++GL +LS QP IKI +LI N+H+ +QA+I+ ++ Sbjct: 148 VLNNYIDQGYKIAIDDTGSGYSGLKMLSEIQPHYIKIDMDLIRNIHEDTFKQALIECFVR 207 Query: 351 CCTSLEIQVSAMGVATPEEWMWLESAGIEMFQG 383 +++ A G+ EE L + G+ QG Sbjct: 208 LSEVTNMKLIAEGIENREELKTLINLGVYAGQG 240 >UniRef50_B9L942 Diguanylate cyclase/phosphodiesterase n=1 Tax=Nautilia profundicola AmH RepID=B9L942_NAUPA Length = 657 Score = 84.0 bits (206), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 55/217 (25%), Positives = 110/217 (50%), Gaps = 7/217 (3%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDS---PSAIAVGQRKDGEIYTADLKSKALAFTMAHAL 232 + PI++ ++RI+ +E +V+ D+ P + + K G IY + + L+ Sbjct: 438 YQPIIENSTKRIVKYETLVRIEYDNKIIPPSKFIDVAKQG-IYYSKITEIVLSEAFDIVK 496 Query: 233 ELGDKMISINLLPMTLVNEPDAVSFLLNE-IKANALVPEQIIVEFTESEVISRFDEFAEA 291 + D ISIN+ + + E + V L+ E + N + + E E + ++D E Sbjct: 497 KFKDYDISINISEIDI--EKEIVRELIYEMLSKNKEFAKYVTFELLEDADVEKYDVLEEF 554 Query: 292 IKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKC 351 I +K G+++AID FG+G++ + L ++PD +K+ LI ++HK +++++I++ Sbjct: 555 ITKIKDLGVTIAIDDFGSGYSNFIRLINYKPDFLKLDGTLIKDIHKDKFSYSVVKSIVEF 614 Query: 352 CTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 + EI+ A V E + ++ G++ QG F K Sbjct: 615 AKANEIKTIAEFVENEEIFKTVKELGVDYSQGYYFGK 651 >UniRef50_A9HX93 PAS:GGDEF n=1 Tax=Roseobacter litoralis Och 149 RepID=A9HX93_9RHOB Length = 459 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 60/226 (26%), Positives = 109/226 (48%), Gaps = 19/226 (8%) Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNEDSPSAIA-------VGQ----RKDGEIYTADLKSK 222 F F PI +R+I+ EA+++ + + I G+ R+ G+ ++ S Sbjct: 210 FCFQPIYRMSNRQIVGAEALIRWHHEKYGMICPEIIVEIAGKSGRMRELGDFILSEACSA 269 Query: 223 ALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVI 282 A+ + + D +S+N P + D F+L+E++A L ++ +E TESE + Sbjct: 270 AIHWPL-------DTFVSVNFSPSDFL-RADFADFVLSELRAVGLDASRLRIEITESEKM 321 Query: 283 SRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQ 342 D+ + L+ G+SV ID FG G + + + + D +KI + L+++ H+ + Sbjct: 322 LLTDDVFSNLSKLRQNGVSVGIDDFGTGNSTMANIDKVPVDFVKIDKSLVSDCHQRKSSK 381 Query: 343 AIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 I AI K L+++V A GV T +E+ L G+ QG F + Sbjct: 382 IFINAISKVSRHLKLEVIAEGVETVQEYAILRGLGVIFAQGFYFHR 427 >UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Bacteria RepID=B2JCW5_BURP8 Length = 1040 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 48/150 (32%), Positives = 78/150 (52%), Gaps = 1/150 (0%) Query: 239 ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAA 298 +S+NL + D ++ ++ L P+ + +E TES ++ +E + L A Sbjct: 867 VSVNLSARQF-QQRDIAKLVMQVLEETGLDPQYLELELTESTIMRNAEEAVSMLNELHAL 925 Query: 299 GISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQ 358 GI +AID FG G++ L L RF DR+KI + ++++ +S + I AII SL +Q Sbjct: 926 GIGLAIDDFGTGYSSLSYLKRFPVDRLKIDRSFVSDIGESSDDETITSAIIALAHSLNLQ 985 Query: 359 VSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 V A GV T + +L+ + QG FAK Sbjct: 986 VIAEGVETSTQLDFLKERACDEMQGYFFAK 1015 >UniRef50_A6W5K6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6W5K6_KINRD Length = 593 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 63/232 (27%), Positives = 109/232 (46%), Gaps = 21/232 (9%) Query: 173 HFAFHPIVDPLSRRIIAFEAIV-----QKNEDSPSAIAVGQRKDGEIYTADLKSKALAFT 227 H A P+VD + R + FEA+V Q+ PS + G I DL + L Sbjct: 342 HLALQPLVDLAAGRTVGFEALVRWQHPQRGNVPPSVFVEVAEESGTIL--DLGAFVLESA 399 Query: 228 MAHALELGDKM------ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEV 281 + +EL +S+NL L +P V+ +++ ++ + L P Q+ +E TES Sbjct: 400 LEALVELQRAAGRSGLEVSVNLSGHQL-QQPGLVAAVVDALRRHGLAPGQLCLEVTESVA 458 Query: 282 ISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPR 341 ++ ++ L++ G+ +A+D FG G++ L L R D +KI + + +V SG R Sbjct: 459 VADLATARNTLQELRSHGVRIALDDFGTGYSSLSYLRRLPVDVLKIDKSFVDDV--SGER 516 Query: 342 -----QAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 A++ I+ ++L + A G+ T + + AG QG LFA+ Sbjct: 517 ADATGAAVLSGIVALSSALGLVTVAEGIETEQSHEVVRGAGCTWGQGYLFAR 568 >UniRef50_A1WC44 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Comamonadaceae RepID=A1WC44_ACISJ Length = 737 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 45/145 (31%), Positives = 81/145 (55%), Gaps = 1/145 (0%) Query: 239 ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAA 298 +++NL + + D V + +++ L P+ + VE TES ++ + D +++L+A Sbjct: 573 VAVNLSAIEF-RQRDVVGEIAQVLQSAGLAPQYLEVEITESALMQQADHTRTTLQALQAL 631 Query: 299 GISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQ 358 G++V +D FG G++ L L R+ D+IK+ + +T+ AI+ AII+ SL++Q Sbjct: 632 GVAVTVDDFGTGYSSLAYLKRYPLDKIKVDRSFVTDTPADSEDVAIVTAIIQLAHSLQLQ 691 Query: 359 VSAMGVATPEEWMWLESAGIEMFQG 383 A GV T E+ L+ G E+ QG Sbjct: 692 PVAEGVETAEQLALLQRLGCELAQG 716 >UniRef50_C3MGW2 Putative sensory box/GGDEF family protein n=2 Tax=Rhizobium RepID=C3MGW2_RHISN Length = 446 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 67/238 (28%), Positives = 115/238 (48%), Gaps = 13/238 (5%) Query: 158 DKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDG 212 ++ L + ++ I+ HF PIVD + ++ FEA+ + + SPS + G Sbjct: 193 EQALRNAIIAEEIDVHF--QPIVDLRNDGVVGFEALARWCDPEFGYVSPSVFVPLAEERG 250 Query: 213 --EIYTADLKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPE 270 E L KA +A EL +S NL L++ P LL + L P Sbjct: 251 FIEALAEMLLRKAAQTALAWPKEL---FLSFNLSSAQLMD-PATSGRLLAIVHQVGLDPR 306 Query: 271 QIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQE 330 ++ +E TE+ V++ D + + L+AAG+ V++D FG G + L L F D++KI + Sbjct: 307 RLELEITETAVMADADVAQKIVSELRAAGVRVSLDDFGTGQSSLCRLRDFSFDKVKIDRA 366 Query: 331 LITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 ++ + + I++AI+ C LE++V A G+ E + L++ G M QG + K Sbjct: 367 FVSRISADRASEHIVKAIVSMCEGLELEVVAEGIEDISEVLKLKALGCGMGQGYFYGK 424 >UniRef50_C6XNM0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XNM0_HIRBI Length = 736 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 58/242 (23%), Positives = 112/242 (46%), Gaps = 19/242 (7%) Query: 159 KELDSCALSPTINDHFAFH--PIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKD 211 ++++ C + + + H PIVD S R + EA+ + N SP+ Sbjct: 476 RKMEQCLIDANLEEELQVHYQPIVDTHSGRTVGMEALARWNNPQLGFVSPAQFIPAAENL 535 Query: 212 GEIYTADLKSKALAFTMAHALELG-----DKMISINLLPMTLVNEPDAVSFLLNEIKANA 266 G I SK M AL++ D +S NL L + P+ L+ I + Sbjct: 536 GII------SKLTTILMEKALKVASSWTTDTYLSFNLSASDLAS-PETPLKLMAIIMRSG 588 Query: 267 LVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIK 326 P++++ E TE+ ++ F+ E ++ + G+ +A+D FG G++ L + + DR+K Sbjct: 589 FSPKRLVFEITETTMMVNFERANEVLRPFRDLGVEIALDDFGTGYSSLGYIQKMPIDRLK 648 Query: 327 ISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLF 386 I + ++++ + I+ I+ C+ LEI+ GV T ++ ++ G + QG + Sbjct: 649 IDRAFVSDLEAKKISRDIMGTIVDLCSHLEIKCIVEGVETHKQLELVQLLGCHLIQGYYY 708 Query: 387 AK 388 +K Sbjct: 709 SK 710 >UniRef50_Q1YMF3 Possible response regulator, EAL, GGDEF domains n=2 Tax=Aurantimonadaceae RepID=Q1YMF3_MOBAS Length = 617 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 63/224 (28%), Positives = 106/224 (47%), Gaps = 18/224 (8%) Query: 176 FHPIVDPLSRRIIAFEAIV-----QKNEDSPS-----AIAVGQRKDGEIYTADLKSKALA 225 + PIV+ R++ FEA++ + N+ SP+ A A G K + + +A Sbjct: 370 YQPIVNGDGSRLLGFEALIRMRDEEGNQISPAVFIPIAEARGYIKTIGTWVIGEAVRQIA 429 Query: 226 FTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 H +S+NL P+ + D VS + + + + ++ +E ES V+ R Sbjct: 430 LWPEHLF------VSVNLSPVQF-GDGDLVSIVRSALDTAGVDGSRLEIEVVESLVLERS 482 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPR-QAI 344 DE ++ LKA GIS+ +D FG G++ L L RF D++KI Q + P I Sbjct: 483 DEILAQLRELKALGISIDMDDFGTGYSSLGYLWRFPFDKLKIDQSFMVAYENGEPSVPQI 542 Query: 345 IQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 + I+ + ++V+A G+ T E+ L+S G + QG F K Sbjct: 543 LDTIVSMAHHMNMKVTAEGIETREQVDLLKSLGCDQLQGFYFGK 586 >UniRef50_Q98BI1 Mll5564 protein n=2 Tax=Mesorhizobium RepID=Q98BI1_RHILO Length = 514 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 58/218 (26%), Positives = 106/218 (48%), Gaps = 7/218 (3%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQ-----RKDGEIYTADLKSKALAFTMAH 230 + P +D + RII +EA+++ N I + + G I A + AH Sbjct: 275 YQPQLDLPTGRIIGYEALIRWNHPERGMIPPMEFIQIAEETGMINPIGEWVLRKACSDAH 334 Query: 231 ALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAE 290 L D +++N+ P+ + + D V + + ++A + P ++ +E TE+ ++ D A Sbjct: 335 HLP-DDCFVAVNISPVQFMTK-DFVGIVRDTMRATGIKPSRLELEVTETAMMQDRDRAAA 392 Query: 291 AIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIK 350 +K L GISVA+D FG G++ L L F ++KI + ++ + A++ I+ Sbjct: 393 ILKELAEMGISVAVDDFGTGYSNLSYLIDFSFGKLKIDRSFVSRIGTDSSSGAVVSTIVG 452 Query: 351 CCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 +L + + A GV T + L +AG E+ QG LF + Sbjct: 453 LSRALGVSIIAEGVETESQATLLRAAGCEVVQGYLFGR 490 >UniRef50_Q7W9Y7 Putative membrane protein n=2 Tax=Bordetella RepID=Q7W9Y7_BORPA Length = 524 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 54/157 (34%), Positives = 84/157 (53%), Gaps = 4/157 (2%) Query: 233 ELGDKMISINLLPMTLVNEPDAVSFLLNEIKA-NALVPEQIIVEFTESEVISRFDEFAEA 291 LGD ISIN+ + + A LL+E+ A L P Q++VE TE ++ DE A Sbjct: 354 RLGDLYISINVSAADMAS--GAAERLLSEMFARTGLTPSQVVVELTERALLHS-DEAVAA 410 Query: 292 IKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKC 351 IK ++ G VAID FG G++ L L+ F+ D +KI + + + + P ++ II+ Sbjct: 411 IKIIRKMGGRVAIDDFGTGYSSLAYLTSFEVDGLKIDKRFVDAIGRDAPSSSVSVHIIEM 470 Query: 352 CTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 SL ++V A GV T + +L G++ QG LF + Sbjct: 471 AKSLGLRVVAEGVETAGQQRFLSEHGVDYAQGWLFGR 507 >UniRef50_Q1N2C7 Signaling repeat/GGDEF domain/EAL domain protein n=1 Tax=Bermanella marisrubri RepID=Q1N2C7_9GAMM Length = 831 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 46/145 (31%), Positives = 76/145 (52%), Gaps = 1/145 (0%) Query: 239 ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAA 298 +SINL + + + +SFL + + L +I +E TES ++ D F + I+ L+ Sbjct: 667 LSINLSALDMA-QSSLLSFLQTSLFNHDLNANKITLEITESAIMENHDLFIKGIQELQTL 725 Query: 299 GISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQ 358 G ++AID FG G++ +L L + IKI + +H + Q I+QAI++ + Sbjct: 726 GFNLAIDDFGTGYSSMLYLKELKAKEIKIDMGFVRGIHTNRVNQKIVQAIVQLANGTDSM 785 Query: 359 VSAMGVATPEEWMWLESAGIEMFQG 383 A GV EE +WL+S G + QG Sbjct: 786 TVAEGVECKEEALWLQSIGCDFAQG 810 >UniRef50_B1LTA1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1LTA1_METRJ Length = 801 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 53/218 (24%), Positives = 111/218 (50%), Gaps = 4/218 (1%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQR---KDGEIYTADLKSKALAFTMAHAL 232 + P+VD S R+ FEA+++ N+ ++ G+ + + ++ AL A Sbjct: 541 YQPLVDMRSGRVAGFEALLRWNKPGYGWVSPGEIIPIAETTGFIVEIGRWALRRACTDAR 600 Query: 233 ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAI 292 D I++N+ + V P + + ++ L P+++ +E TES ++ E E + Sbjct: 601 TWSDLKIAVNISSIH-VRMPGFHAEVAAVLRETGLAPDRLEIEITESVLLDHGPEVLENL 659 Query: 293 KSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCC 352 K L+A G+ +A+D FG G++ L L+ F D++K+ + + ++ + A+++AI + Sbjct: 660 KRLRATGVRIALDDFGTGYSSLSYLTEFPFDKVKVDRSFVRDLQGRPEKVAVVEAIARMA 719 Query: 353 TSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 +L + V+ GV T ++ L ++ QG L++ A+ Sbjct: 720 RALSMSVTVEGVETRQQLDVLRDKRCDIAQGFLYSPAR 757 >UniRef50_Q9ABX9 Uncharacterized signaling protein CC_0091 n=3 Tax=Caulobacter RepID=Y091_CAUCR Length = 809 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 50/146 (34%), Positives = 81/146 (55%), Gaps = 3/146 (2%) Query: 239 ISINLLPMTLVNEPDAVSFLLNEIK-ANALVPEQIIVEFTESEVISRFDEFAEAIKSLKA 297 I++NL P+ L N A+ L++E+ L P ++ +E TES + + + ++ LKA Sbjct: 632 IAVNLSPIQLHNP--ALPTLVHEVLITTGLSPSRLELEITESALFKDYQRALDNLRRLKA 689 Query: 298 AGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEI 357 G+ +A+D FG GF+ L L F D+IKI + + N+H+ AI++A++ SLEI Sbjct: 690 LGVRIAMDDFGTGFSSLSTLQSFPFDKIKIDKSFVENIHRHDRATAIVRAVLGLGRSLEI 749 Query: 358 QVSAMGVATPEEWMWLESAGIEMFQG 383 V A GV T E+ ++L QG Sbjct: 750 PVVAEGVETEEQILFLRGEDCAELQG 775 >UniRef50_B8GLY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GLY5_THISH Length = 1082 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 63/224 (28%), Positives = 105/224 (46%), Gaps = 15/224 (6%) Query: 176 FHPIVDPLSRRIIAFEAIV-----QKNEDSPSA-IAVGQRKDGEIYTADLKSKALAFTMA 229 + PI+D S RI A E+++ ++ SP I V ++ D L AL A Sbjct: 840 YQPILDAASGRIAAMESLMRWQHPERGLVSPGVFIPVAEQSD---LILALGRWALVSACA 896 Query: 230 HALELGDKM-----ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISR 284 D +S+N+ P +P V +L ++ + P+ +I+E TES ++ Sbjct: 897 QVRAWSDAGLEPVPVSVNI-PACHFRQPGFVEEVLGVVRETGVQPQSLIIELTESALMEP 955 Query: 285 FDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAI 344 E I+ L+ G+ VAID FG G++ L L RF + +K+ + ++ + +AI Sbjct: 956 VSLAEERIRRLRDTGVVVAIDDFGTGYSSLGYLQRFHVNYLKVDRSFVSGLPGDENARAI 1015 Query: 345 IQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 +A+I SL +QV A GV T + L + G + QG L + Sbjct: 1016 TEAVIGVSHSLGLQVVAEGVETQAQLDHLRATGCDKVQGYLTGR 1059 >UniRef50_Q81HZ8 Sensory box/GGDEF family protein n=71 Tax=Bacillus cereus group RepID=Q81HZ8_BACCR Length = 567 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 68/236 (28%), Positives = 112/236 (47%), Gaps = 14/236 (5%) Query: 165 ALSPTINDH---FAFHPIVDPLSRRIIAFEAIVQ-KNEDSPSA----IAVGQRKDGEIYT 216 AL I D A PI+D ++R EA+V+ ED P + I V + I Sbjct: 319 ALQKAIRDEELDVALQPIIDLKTKRYSGIEALVRCMTEDGPISPSEFIPVAEESGLIIKL 378 Query: 217 AD--LKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIV 274 D L+ F + G K+ S+NL L+ + +S + + +K P ++I+ Sbjct: 379 GDWVLEKSCRLFKTLPNYQEGLKL-SVNLSIQQLMQKRFILS-VRSILKRTGFPPNRLIL 436 Query: 275 EFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITN 334 E TES + FD ++ L+ G+ +A+D FG G++ L L + D +KI + I Sbjct: 437 EITESIAVRHFDYIIATLQELRNMGVLIALDDFGTGYSSLYYLKQLPLDIVKIDRNFIRE 496 Query: 335 VH--KSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 H + P + I++++I+ SL + V A GV T E+ L+S + QG +AK Sbjct: 497 FHYDHAQPERTIVKSVIEIAHSLNLAVVAEGVETVEQESLLQSMSCDYVQGFYYAK 552 >UniRef50_UPI0001788A67 diguanylate phosphodiesterase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788A67 Length = 348 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 7/216 (3%) Query: 178 PIVDPLSRRIIAFEAIVQKNE----DSPSAIAVGQRKDGEIYTADLKSKALAF-TMAHAL 232 PIVDP + +I+A+E +++ E P + RK G D ++ A T A L Sbjct: 119 PIVDP-NEQIVAYEFLLRPVEWGLRFQPYELFETARKTGLHSFLDQAARTSAIETSAEWL 177 Query: 233 ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAI 292 +G K +N LP ++ + +S N I L P + E E+E I Sbjct: 178 PIGVKRF-VNFLPSSIYDAQMCLSHTFNTIDRLHLDPRDFVFEVVETERIDDVKHLQSIF 236 Query: 293 KSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCC 352 + ++ GISVA+D GAG++ L + + +PD +KI + LI + ++ +Q ++ I Sbjct: 237 EVYRSHGISVAMDDVGAGYSTLEQMIKLKPDYVKIDRSLIDHCDRNPAQQKQLEMITNMA 296 Query: 353 TSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 V A G+ EE+ + GIE+ QG LF K Sbjct: 297 HDFGAMVLAEGIERREEFHFCRDIGIELSQGYLFGK 332 >UniRef50_C6XPY9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XPY9_HIRBI Length = 732 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 46/120 (38%), Positives = 68/120 (56%) Query: 269 PEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKIS 328 P+QI +E TES ++ A+ +K LKAAG +A+D FG G++ L L R Q D++KI Sbjct: 586 PDQIELEITESVLLEDSPRVAKTLKILKAAGFKIALDDFGTGYSSLSYLRRHQVDKLKID 645 Query: 329 QELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 Q + ++ A++QAI+ SL + V+A GV T E+ L G QG LF+K Sbjct: 646 QSFVASIGVREDASAVVQAILSLGESLGLSVTAEGVETIEQRDSLRKRGCAYLQGYLFSK 705 >UniRef50_C4XGC1 Response regulator receiver protein n=2 Tax=Desulfovibrio RepID=C4XGC1_DESMR Length = 725 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 61/231 (26%), Positives = 108/231 (46%), Gaps = 14/231 (6%) Query: 170 INDHFAFH--PIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQ-----RKDGEIYTAD---L 219 + D F H PI+D +RR+ EA+V+ + G+ + G I L Sbjct: 477 VRDEFVLHYQPILDLATRRLRGVEALVRWRRVDGELVPPGEFIPAAEQSGLIIPLGAVVL 536 Query: 220 KSKALAFTMAHALELGDK--MISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFT 277 A A LGD +++NL +PD V ++ ++ A+ P + +E T Sbjct: 537 TEACRALARWRAGSLGDSPFFMAVNLSARQF-TQPDLVKQVVTALRREAMAPADLKLEIT 595 Query: 278 ESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHK 337 ES ++ + ++ L+ G+S+ ID FG G++ L L RF D +K+ + ++ + + Sbjct: 596 ESVLMEHPESAMLKLRGLRELGVSIGIDDFGTGYSSLSYLQRFPIDTLKVDRAFVSGMEE 655 Query: 338 SGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 G R I+++++ +L V A G+ T + L G +M QG LFA+ Sbjct: 656 QGNR-VIVRSVVSLAHNLGYDVVAEGIETAAQLDDLSRLGCDMGQGFLFAR 705 >UniRef50_C8QHT9 Diguanylate phosphodiesterase n=1 Tax=Pantoea sp. At-9b RepID=C8QHT9_9ENTR Length = 453 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 16/239 (6%) Query: 176 FHPIVDPLSRRIIAFEAIVQ-----KNEDSPSAIAVGQRKDGEIYTADLKSKALAFTMAH 230 + P +D ++ +I FEA+++ K SP K G I D+ + T+ Sbjct: 218 YQPQLDS-NKALIGFEALLRWKHPAKGFISPEVFIPIAEKSGLI--IDIGRWVMEQTLRQ 274 Query: 231 ALE------LGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISR 284 E LGD SIN+ P+ L++ LL + + + PE+I E TE+ I Sbjct: 275 IAEWERLHHLGDIAFSINISPLQLMHRNFTQDTLLT-LSRSKIRPERIKFEITETTFIYD 333 Query: 285 FDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAI 344 ++ AE + A GI AID FG G++ L +S F D IKI + LI V K+ + Sbjct: 334 QEKIAEVMHRFSALGIKWAIDDFGVGYSSLKSISDFAVDDIKIDKSLIMQVFKNESASLV 393 Query: 345 IQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEKK 403 +Q I+ + + V A G+ E + +L+ G +FQG FA+ L ++ W +K+ Sbjct: 394 VQKTIELSREMGLNVLAEGIENEEYFEYLKKMGCHLFQGFHFARP-LPAADALMWIKKQ 451 >UniRef50_B5ZS02 Diguanylate cyclase/phosphodiesterase n=19 Tax=Rhizobiales RepID=B5ZS02_RHILW Length = 454 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 68/249 (27%), Positives = 122/249 (48%), Gaps = 14/249 (5%) Query: 158 DKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVG-------QRK 210 ++ L + +S I+ HF PIV + +++ FEA+ + N+ ++ G +R Sbjct: 197 EQALRNAIISDAIDVHF--QPIVSLSNNQVVGFEALARWNDPDLGFVSPGVFVPLAEERG 254 Query: 211 DGEIYTADLKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPE 270 + + L KA ++ EL +S NL L++ P S +L+ + P Sbjct: 255 FIDALSEALLRKAAEAALSWPREL---FLSFNLSSAQLMD-PGTSSSVLSILGRVGFDPH 310 Query: 271 QIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQE 330 ++ +E TE+ V+S D I L+AAG+ +++D FG G + L L F D+IKI + Sbjct: 311 RLELEITETAVMSSADTAHRIIADLRAAGVRISLDDFGTGQSSLGRLRDFIFDKIKIDRA 370 Query: 331 LITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 ++ ++ + II+AI+ C LE++V A G+ E + L G M QG F + Sbjct: 371 FVSRINSDRASEHIIKAILTMCDGLELEVVAEGIEDYAEAVKLRMLGCGMGQGYHFGRPA 430 Query: 391 LNGIPSIAW 399 +GI ++ + Sbjct: 431 -DGIATLRF 438 >UniRef50_C4ZM30 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZM30_THASP Length = 1002 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 49/150 (32%), Positives = 83/150 (55%), Gaps = 1/150 (0%) Query: 239 ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAA 298 +SIN+ ++PD V + I+ + + P + +E TES VI + ++ +KA Sbjct: 844 LSINVSARQF-HQPDFVGKVAAAIERHRIRPGGLEIELTESVVIGDIETTVLRMRQIKAL 902 Query: 299 GISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQ 358 G+ A+D FG G++ L L R D++KI Q + ++ K +AI++AI+ SL+++ Sbjct: 903 GVRFALDDFGTGYSSLSYLKRLPFDQLKIDQMFVRDMEKDTSSEAIVRAILALSRSLDLK 962 Query: 359 VSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 V A GV T + L + G E+FQG LF + Sbjct: 963 VVAEGVETAAQHELLLTRGCELFQGYLFGR 992 >UniRef50_A8RML2 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RML2_9CLOT Length = 850 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 60/222 (27%), Positives = 103/222 (46%), Gaps = 12/222 (5%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQ-----RKDGEIYTADLKSKALAFTMAH 230 + P VD LS R+ EA+ + + ++ G+ + G I L+ +MA Sbjct: 619 YQPQVDTLSGRLCGAEALARWHCSKYGDVSPGEFIPLMEQSGLIIP--FGQWILSHSMAQ 676 Query: 231 ALELG----DKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFD 286 LE D IS+NL + L + D +SFL ++ N+L P ++I+E TE+ + + Sbjct: 677 CLEWSRSKPDFQISVNLSYIQLT-QGDFISFLRTVLEENSLAPSRLIMELTETYLAKAEE 735 Query: 287 EFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQ 346 + I +K G+ +A+D FG G++ L L D +KI + + + I+ Sbjct: 736 DTLRLIAQMKELGVKIAMDDFGVGYSSLFSLKSIPVDVVKIDRGFVKGITSDLFNATFIR 795 Query: 347 AIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 +I C + +V GV T EE+ + G+E QG F + Sbjct: 796 SITDLCHDVGRKVCLEGVETKEEYEAVRELGMEYIQGYYFGR 837 >UniRef50_A5VDE7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Sphingomonas RepID=A5VDE7_SPHWW Length = 887 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 65/227 (28%), Positives = 105/227 (46%), Gaps = 10/227 (4%) Query: 173 HFAFHPIVDPLSRRIIAFEAIVQ-----KNEDSPSAIAVGQRKDGEIYTADLKSKALAFT 227 H + P+VD S I+ FEA+V+ + SPS + G I + L Sbjct: 551 HLVYQPVVDAGSEAIVCFEALVRWDHPTRGAVSPSDFIPVAEEIGLI--PQIGEWVLRTA 608 Query: 228 MAHALELGDKM-ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFD 286 A D + +++N+ P+ N P +L+ + A L P ++ +E TE ++ Sbjct: 609 CLEAANWPDPVRVAVNISPIQFAN-PSLPGIVLSALAAAQLPPHRLELEITEGVFLNDDA 667 Query: 287 EFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQA-II 345 LKA G+ A+D FG G++ L L + ++IKI Q + G R A II Sbjct: 668 ATDAMFARLKAIGVRFALDDFGTGYSSLGYLKKAPFNKIKIDQSFVRGAAVPGNRNAAII 727 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLN 392 +AI+ SLE++ +A G TP+E + S G QG +F + L+ Sbjct: 728 RAIVALAESLEMETTAEGAETPDELALIRSLGCSHIQGYIFGRPMLS 774 >UniRef50_B2UJ08 Diguanylate cyclase/phosphodiesterase n=5 Tax=Ralstonia RepID=B2UJ08_RALPJ Length = 670 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 47/138 (34%), Positives = 78/138 (56%), Gaps = 2/138 (1%) Query: 251 EPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAG 310 +P V +++ ++ + P Q+ +E TES ++ + ++SL AAGIS++ID FG G Sbjct: 493 DPALVENVMDVLRETGMPPHQLELEITESVLMEDIEANIALLESLHAAGISLSIDDFGTG 552 Query: 311 FAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEW 370 ++ L L RF ++KI + + + G +AI A+I SL +QV A GV PE+ Sbjct: 553 YSSLAYLQRFPIQKLKIDRSFVQRMPGDG--EAIAGAVIAMAHSLRMQVVAEGVEDPEQL 610 Query: 371 MWLESAGIEMFQGDLFAK 388 L AG ++ QG LF++ Sbjct: 611 ALLRDAGCDLGQGYLFSR 628 >UniRef50_A4U1P1 Sensory box/GGDEF family protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U1P1_9PROT Length = 768 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 63/223 (28%), Positives = 106/223 (47%), Gaps = 11/223 (4%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDSPSAI--------AVGQRKDGEIYTADLKSKALAFT 227 + PIVD SRRII+FEA+++ N I A G G I L+ Sbjct: 533 YQPIVDTQSRRIISFEALLRWNHADDGWISPVEFIPMAEGNGMIGPIGEWVLRRACQQMR 592 Query: 228 MAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQII-VEFTESEVISRFD 286 + + +++N+ + L + V L+ ++ A VP + +E TE+ V+ D Sbjct: 593 DWDRMGIPPVPVAVNMSALQLKRQD--VPMLVRKMLTEAGVPSHRLELELTETTVMEDAD 650 Query: 287 EFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQ 346 + G+ +A+D FG G++ L L RF ++KI + + ++ + AI + Sbjct: 651 AAQRIFADIAGLGVRLAVDDFGTGYSSLARLKRFPVGKLKIDRSFVGDLAEDEGDAAIAR 710 Query: 347 AIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 AII ++ ++V A GV TPE+ L AG + QG LF++A Sbjct: 711 AIISMGHAMGLKVVAEGVETPEQLAILAEAGCDAIQGFLFSRA 753 >UniRef50_A4TD28 Diguanylate phosphodiesterase n=1 Tax=Mycobacterium gilvum PYR-GCK RepID=A4TD28_MYCGI Length = 447 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 64/222 (28%), Positives = 106/222 (47%), Gaps = 22/222 (9%) Query: 176 FHPIVDPLSRRIIAFEAIVQ------KNEDSPSAIAVGQRKDGEIYTADLKSKALAFTMA 229 F PI D ++ +I FE + + ++ D A+A R+ D++ KAL + Sbjct: 228 FQPIFDLITGEVIGFEGLSRFRCEPTRSPDKWIALAHNVRRG-----IDVELKALRALLK 282 Query: 230 HALELGDK-MISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEF 288 AL + DK ++S+NL P+ L + P LL+ P ++VE TE E Sbjct: 283 GALSIPDKYLVSVNLSPLALAD-PIIQQELLS-------YPRGVVVELTEREPAPEL--L 332 Query: 289 AEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAI 348 E+++ L+ +GI +AID G+GFAGL + R +PD IK+ +EL + R+A+ A+ Sbjct: 333 GESVEPLRQSGIRLAIDDAGSGFAGLTTILRLRPDIIKLDRELTVGIDTDPSRRALATAL 392 Query: 349 IKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 ++ A G+ T + L GI QG + + Sbjct: 393 THFAREIDAYTVAEGIETEVQMQLLRDIGIRYGQGYFLGRPQ 434 >UniRef50_A1U2T3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Marinobacter RepID=A1U2T3_MARAV Length = 725 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 43/155 (27%), Positives = 80/155 (51%), Gaps = 1/155 (0%) Query: 236 DKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSL 295 D +++NL P + V P V L+N + A+ + + +E TE+ +++ ++ + +K L Sbjct: 552 DLRLAVNLSP-SQVEHPRFVETLMNRVAAHNFPADNLEIEITENVIMNDLEQISRKLKEL 610 Query: 296 KAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSL 355 A G+ +AID FG G++ L L R +K+ Q + + I+ AII L Sbjct: 611 AATGVRIAIDDFGTGYSSLNYLHRLPIHTLKVDQSFVKAIRSGEDGACIVNAIIAMAHGL 670 Query: 356 EIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 ++++ A GV T ++ +L+S G QG + A+ Sbjct: 671 KLEIVAEGVETDDQLAYLKSLGCHQVQGFFYGPAR 705 >UniRef50_A5V028 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=A5V028_ROSS1 Length = 892 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 64/228 (28%), Positives = 113/228 (49%), Gaps = 20/228 (8%) Query: 176 FHPIVDPLSRRIIAFEAIV-----QKNEDSPSA-IAVGQRKD-----GEIYTADLKSKAL 224 + PIV+ ++R + FEA++ Q+ +P+ IA+ + G++ + + Sbjct: 656 YQPIVELSTQRTVGFEALLRWRHPQRGIVTPAEFIAIAEETGLIVPIGQMVLREACRQLS 715 Query: 225 AFTMAHALELGDKMISINLLPMTLVNEPDAV---SFLLNEIKANALVPEQIIVEFTESEV 281 A+ H ++INL P + + PD V + L++E + +A + + +E TE+ + Sbjct: 716 AWKQRHPERT--LAMNINLSPRQIAD-PDLVHRTAALIDEYRLDA---DALRLEITETAI 769 Query: 282 ISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPR 341 I D ++ L+A G+ + ID FG G++ L L RF IKI + ++ +H+S Sbjct: 770 IEHGDAAGRVLQQLRALGVQICIDDFGTGYSSLSYLHRFPIATIKIDRSFVSQIHRSHEN 829 Query: 342 QAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 I+++II SL + V A G T E+ + L S QG LFA A Sbjct: 830 TEIVRSIISLARSLGMAVIAEGTETEEQLLRLRSMSCAYGQGWLFAHA 877 >UniRef50_B9Y8C9 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y8C9_9FIRM Length = 1002 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 48/150 (32%), Positives = 78/150 (52%), Gaps = 1/150 (0%) Query: 239 ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAA 298 +SINL + L+ EPD + ++ + A + P +IIVE TES + SR + + Sbjct: 831 MSINLSYLQLM-EPDFIDYMQETLAATQVDPGRIIVEMTESVIASRAHALEHLFQRIHDL 889 Query: 299 GISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQ 358 G+ +A+D FG G++ L +L + D +KI + + V S ++ IQ I+ C + I+ Sbjct: 890 GMRIAMDDFGTGYSSLDMLKKMPADIVKIDRAFVHGVDASNFDESFIQFIVAICHKVNIE 949 Query: 359 VSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 V A GV T E+ L ++ QG F K Sbjct: 950 VCAEGVETEAEFQILYPMNVDTIQGYYFGK 979 >UniRef50_B8KB62 Ggdef family protein n=1 Tax=Vibrio parahaemolyticus 16 RepID=B8KB62_VIBPA Length = 572 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 63/221 (28%), Positives = 107/221 (48%), Gaps = 8/221 (3%) Query: 176 FHPIVDPLSRRIIAFEAIVQ----KNEDSPSAIAVGQRKD-GEIYTADLKSKALAFTMAH 230 F PIV + + FEA+ + ++E + + + +D G+I+ D +AF Sbjct: 193 FQPIVSVKQQCVEKFEALCRFPPLESEPATTQDYIQVAEDMGKIFELDNLVCGMAFEQFK 252 Query: 231 ALE--LGDKM-ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDE 287 AL+ GD + +S+N T V D + + L P+ + +EFTES + D Sbjct: 253 ALQKRFGDTLQLSVNRSLNTDVGIVDVLKHTALALDDAGLSPDCLNIEFTESAFLDNSDN 312 Query: 288 FAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQA 347 + I++L+ AG+ +A+D FG+G A L++ D +KI ++ I+ + K I+ Sbjct: 313 SQQLIQTLRDAGVKIAVDDFGSGCASFHYLTKSFFDVLKIDRQFISGLEKGTREYHIVHT 372 Query: 348 IIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 ++ L + V A GV T E L G++ QG LFAK Sbjct: 373 LVHLAHQLNLDVVAEGVETESELALLTELGVDYIQGYLFAK 413 >UniRef50_C0D241 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=C0D241_9CLOT Length = 927 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 51/168 (30%), Positives = 90/168 (53%), Gaps = 1/168 (0%) Query: 221 SKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESE 280 ++A AF + LG + + INL L+ ++ LL I ++ + P ++ +E TES Sbjct: 738 TQACAFLHEYGDRLGIRRMGINLSVQQLLV-GNSAGHLLELIGSSGMDPRRVTLEITESI 796 Query: 281 VISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGP 340 +I D+ A+ + L+ AGI VA+D FG G++ L LS D +KI + L + Sbjct: 797 LIQSIDQAAQVLGKLRQAGIHVALDDFGVGYSSLNYLSNLPVDILKIDRSLTKQILTDQK 856 Query: 341 RQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 + A++++I++ ++ V A GV T E + SAG++ QG +A+ Sbjct: 857 QFALLKSIVEMARINDLMVVAEGVETQAEQAIITSAGVQYIQGYYYAR 904 >UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L724_9DELT Length = 827 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 63/223 (28%), Positives = 102/223 (45%), Gaps = 11/223 (4%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQ-----RKDGEI-----YTADLKSKALA 225 + PIVD RI+ FEA+V+ + + GQ + G I + D + L Sbjct: 589 YQPIVDVKDSRIVGFEALVRWDHPDRGLVPPGQFIPLAEETGLILPLGRFVIDEACRQLR 648 Query: 226 FTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 E D +S+N+ V + V + + A L P + +E TES ++ Sbjct: 649 AWQLEMPEAADLSVSVNVSCRQFVKD-GLVEHVAQVLAATGLPPACLKLEITESVLMHDA 707 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 + A + LKA G+ +AID FG G++ L L + D +KI + I+ G Q I+ Sbjct: 708 EHTARELNRLKALGVKIAIDDFGTGYSSLSYLRQLPIDHLKIDRSFISGQGCDGESQEIV 767 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 ++II SL + V A GV P++ L A + QG +F++ Sbjct: 768 KSIISLARSLGLTVIAEGVECPDQLDRLRLADCDKAQGFMFSR 810 >UniRef50_Q1JYN5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JYN5_DESAC Length = 609 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 54/222 (24%), Positives = 107/222 (48%), Gaps = 15/222 (6%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDSP---------SAIAVGQRKDGEIYTADLKSKALAF 226 F PIVD +II +EA+V+ +SP +AI + + E+ D+ + + Sbjct: 44 FQPIVDLADGKIIGYEALVRGPSNSPLHSPANLFNAAIHCDRLTELEMLCRDVNIEFFS- 102 Query: 227 TMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFD 286 L+L K+ +N+ P L+ F + + P +++E TE+ I + Sbjct: 103 ----RLKLPGKLF-LNVSPKALLEPNFPHGFTRQTLAHYGMDPRNVVIELTENFPILDIE 157 Query: 287 EFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQ 346 A+ + G VA+D G+ +AGL L S +PD +K + I ++++ ++ +IQ Sbjct: 158 TIRSALNHYRQEGFKVALDDLGSAYAGLRLWSELKPDLVKFDKYFIQSINRDKHKKQLIQ 217 Query: 347 AIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 ++ + ++ + A G+ T EE+ +++ G+ QG F++ Sbjct: 218 SLQEIAKCVDCRTIAEGIETLEEYYVVQALGVTYGQGYYFSR 259 >UniRef50_A4BFV7 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Reinekea blandensis MED297 RepID=A4BFV7_9GAMM Length = 814 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/219 (25%), Positives = 105/219 (47%), Gaps = 6/219 (2%) Query: 176 FHPIVDPLSRRIIAFEAIVQ--KNEDSPSAIAVGQRKDGEIYTAD---LKSKALAFTMAH 230 + PI D S R IA EA+++ + +P + G I+ L + + H Sbjct: 580 YQPIFDLDSNRCIAAEALLRWPSTQLAPDQFIPVAEETGLIHPMGNWILSTAVRQWAQWH 639 Query: 231 ALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAE 290 +S+N+ + L +P + ++ K L P ++++E TES ++ Sbjct: 640 DEGRELTYLSVNISVLQL-QQPGFIDQAISLTKQYHLPPGRLVLEITESILLQTSPNVLS 698 Query: 291 AIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIK 350 I L+ AG +AID FG GF+ L L + D +K+ + + + ++ AI +AI+ Sbjct: 699 QINRLRQAGYRLAIDDFGTGFSSLNYLKQLPIDYLKVDRSFVEGIIENNQDSAIYRAIVD 758 Query: 351 CCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 +++I++ A GV TP++ +WL+ G+ QG + +A Sbjct: 759 MAMAMDIEIVAEGVETPQQMLWLKQQGVTFAQGYFYTQA 797 >UniRef50_C1D1W4 Putative diguanylate-cyclase n=1 Tax=Deinococcus deserti VCD115 RepID=C1D1W4_DEIDV Length = 856 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 49/154 (31%), Positives = 80/154 (51%), Gaps = 1/154 (0%) Query: 235 GDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKS 294 G +++N+ + PD V + ++A L ++ VE TES V+ E E ++ Sbjct: 686 GAMRVAVNVSALQFAR-PDFVDTVSATLRATGLEAGRLEVELTESAVMEDVKESVERMER 744 Query: 295 LKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTS 354 L+A G+SVA+D FG G++ L L R + +KI + I N+ + ++++QAI+ Sbjct: 745 LRALGVSVAVDDFGTGYSSLSYLQRLPLNVLKIDRTFIQNLGVNATSRSVVQAIVGLAQH 804 Query: 355 LEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 L ++ A GV TP+E L G QG FAK Sbjct: 805 LNLECVAEGVETPDEREALIEVGCRYAQGFFFAK 838 >UniRef50_B2IVQ6 Response regulator receiver modulated diguanylate phosphodiesterase n=4 Tax=Nostocaceae RepID=B2IVQ6_NOSP7 Length = 406 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 63/222 (28%), Positives = 106/222 (47%), Gaps = 13/222 (5%) Query: 176 FHPIVDPLSRRIIAFEA----------IVQKNEDSPSAIAVGQRKDGEIYTADLKSKALA 225 + PIVD S +I+A E+ IV E P A + G I + LKS Sbjct: 165 YQPIVDIASGKIVAAESLLRWQSPELGIVYPTEFIPLAESTGLIV--PIGKSVLKSVCKQ 222 Query: 226 FTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 + + ++++NL + N+PD ++ ++N I N + P+ + +E TES ++ Sbjct: 223 IKIWRDTGINSLVVTVNLSAIEF-NQPDFINKIVNFITINNVQPDDLELELTESMIMQDV 281 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 + + L++ GI +AID FG G++ L+ L + +KI + I NV + AI Sbjct: 282 NSAIATMSKLQSLGIKIAIDDFGTGYSSLIYLKNLPINTLKIDRYFIHNVANDTQKSAIT 341 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFA 387 +A+I+ +L + V A GV T E +L QG LF+ Sbjct: 342 KALIQMGHNLNLNVIAEGVETEAELAFLRQQNCNSMQGFLFS 383 >UniRef50_C6NZF1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZF1_9PROT Length = 995 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 51/152 (33%), Positives = 81/152 (53%), Gaps = 1/152 (0%) Query: 239 ISINLLPMTLVNE-PDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKA 297 IS+N P+ N+ P + L E++ N L+ ++VE TE ++ + + + + Sbjct: 828 ISVNKSPVQFHNDNPLKAAEWLGELEQNGLLASSLVVEITEGVLLDDDGNVKDRLLASRD 887 Query: 298 AGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEI 357 AGI VAID FG G++ L L +F D +KI Q + N+ A+ +AII L + Sbjct: 888 AGIQVAIDDFGTGYSSLAYLKKFDIDYLKIDQTFVNNLGNQSDDMALCEAIIVMAHKLGL 947 Query: 358 QVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 +V A GV T ++ L+ AG + QG LF+KA Sbjct: 948 KVIAEGVETEQQRDLLKQAGCDYAQGFLFSKA 979 >UniRef50_A6LW52 Diguanylate cyclase/phosphodiesterase n=8 Tax=Clostridium RepID=A6LW52_CLOB8 Length = 989 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 72/248 (29%), Positives = 119/248 (47%), Gaps = 15/248 (6%) Query: 146 AEDSWLFIADGSDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS---PS 202 EDS+LF S ++L+ I +AF PI+D + +I A+EA+++ +S P Sbjct: 726 TEDSFLF---SSQEDLNKLLDEKLI--KYAFQPIIDARTGKIFAYEALMRSQLESLKNPL 780 Query: 203 AIAVGQRKDGEIYTADLKS--KALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLN 260 I D +Y + + KAL + + E D + IN LP +++ D F Sbjct: 781 HIIKLATADSRLYEIEKITFFKALESFVRNKEEFKDAKLFINSLPNYVLSYEDRKRF--E 838 Query: 261 EIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRF 320 E+ L +++++E E+E S D + K ++ +AID FG+G+ +L Sbjct: 839 ELYGEHL--DRLVIELLENER-SNGDNISIKRKVIEKWNAKLAIDDFGSGYNNEAVLLAI 895 Query: 321 QPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEM 380 PD +KI E++ + K RQ I + +I +I+V A GV T EE L G++ Sbjct: 896 TPDYVKIDMEIVRGIDKDLNRQQISKNLISYAKQRKIKVVAEGVETREELTKLIEFGVDY 955 Query: 381 FQGDLFAK 388 QG F+K Sbjct: 956 LQGYYFSK 963 >UniRef50_A0RLD3 Diguanylate cyclase/phosphodiesterase n=79 Tax=cellular organisms RepID=A0RLD3_BACAH Length = 910 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 58/221 (26%), Positives = 104/221 (47%), Gaps = 9/221 (4%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDG---EIYTADLKSKALAFT 227 + P V +++II FEA+++ SP+ + G E+ L++ L Sbjct: 674 YQPQVSTKTKQIIGFEALIRWKHPKLGIVSPAQFIPLAEETGFIIELGNWILRTACLEAK 733 Query: 228 MAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDE 287 H + +NL + N D + + ++ L PE + +E TES I++ Sbjct: 734 RWHNQGFSHLKVGVNL-SVVQFNHADLIPTISKVLEETELKPEALDIEITESIAINQNQS 792 Query: 288 FAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQA 347 ++ L+ GI ++ID FG G++ L L+++ + +KI++E I + S +AII + Sbjct: 793 VVAKLEQLQNLGIQISIDDFGTGYSSLAYLTKYPINTLKIAREFICGITTSPLEEAIISS 852 Query: 348 IIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 II L ++V A GV T E+W +L + QG +K Sbjct: 853 IITLSKELNLEVIAEGVETEEQWKFLYEQNCDHIQGFFISK 893 >UniRef50_B9JBA8 Sensory box/GGDEF family protein n=17 Tax=cellular organisms RepID=B9JBA8_AGRRK Length = 605 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 58/224 (25%), Positives = 110/224 (49%), Gaps = 9/224 (4%) Query: 175 AFHPIVDPLSRRIIAFEAIVQKNE----DSPSAIAVGQRKDGEIYTAD--LKSKALAFTM 228 AF PIV+ + + +EA+++ E DSP I + G++ + + S+A+A Sbjct: 35 AFQPIVEAGTGTVFGYEALMRGQERIGFDSPIEILDEAERSGQLLGLEQMVTSRAVA-KF 93 Query: 229 AHALELGDKMISINLLPMTLVNEPDA-VSFLLNEIKANALVPEQIIVEFTESEVISRFDE 287 A G + +NL + L+ + D V LL +K + P I E +E + E Sbjct: 94 ATLPNAGTATLFLNL-DVRLIPQGDVLVDGLLQHMKKTGIAPSSICFELSERFDNTSVPE 152 Query: 288 FAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQA 347 F++ + ++ AG +AID FG G + LL+ + D +KI + + N+ ++ ++ I++ Sbjct: 153 FSDLVAKMRDAGFKLAIDDFGVGHGEMKLLADYPVDYLKIDRHFVANIDRNARKRHILRN 212 Query: 348 IIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 I+ L +V A G+ T E++ G+++ QG A+ + Sbjct: 213 IVNIAHVLGTRVIAEGIETEAEFLTCREFGVDLVQGWFIARPTM 256 >UniRef50_B9MF12 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Comamonadaceae RepID=B9MF12_DIAST Length = 630 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 61/221 (27%), Positives = 107/221 (48%), Gaps = 8/221 (3%) Query: 176 FHPIVDPLSRRIIAFEAIV-----QKNEDSPSAIAVGQRKDGEIYTADLKSKALAFTMAH 230 + P V+ + R++ EA++ Q E SP G I A A Sbjct: 388 YQPQVEVATNRMVGVEALLRWHDPQLGEVSPERFVPVAEATGLILELGAWVMAAACRQIA 447 Query: 231 ALEL-GDKM-ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEF 288 A E G ++ +++NL L + D V + ++ + + PE + +E TESE ++ ++ Sbjct: 448 AWERQGMRLRVAVNLSAQQL-RQTDLVEQVARNLRTHHVPPELLELEVTESEALADPEQA 506 Query: 289 AEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAI 348 + + L+A G++VA+D FG G + L L R IK+ +E + NV SG +++A+ Sbjct: 507 CQVLNELRALGVAVALDDFGTGHSSLAYLKRLPVSHIKVDREFMRNVPASGGDTTLVRAV 566 Query: 349 IKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 + ++ ++V GV T E+ +L +QG LFAKA Sbjct: 567 VALAHTMGLRVVVEGVETREQLQFLREMQCACYQGWLFAKA 607 >UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8G8_9NEIS Length = 887 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 43/150 (28%), Positives = 83/150 (55%), Gaps = 1/150 (0%) Query: 238 MISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKA 297 ++++NL P + D V + ++ + L P Q+ +E TE ++ + ++ + + +LK Sbjct: 716 LLAVNLSPRQFLRH-DLVGQVRKALQGSGLPPAQLELELTEGALMEQAEQAVKTLHALKR 774 Query: 298 AGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEI 357 G+S+AID FG G++ L L RF D++KI + + ++ + I+ II +L++ Sbjct: 775 LGVSLAIDDFGTGYSSLAYLKRFPLDKLKIDRSFVRDLPRDSSDAEIVTTIIAMVRNLKL 834 Query: 358 QVSAMGVATPEEWMWLESAGIEMFQGDLFA 387 + A GV TP++ +L G + QG LF+ Sbjct: 835 EALAEGVETPQQLAFLRQLGCDSGQGYLFS 864 >UniRef50_C8VYA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VYA6_DESAS Length = 773 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 57/218 (26%), Positives = 103/218 (47%), Gaps = 5/218 (2%) Query: 175 AFHPIVDPLSRRIIAFEAIVQKNEDS----PSAIAVGQRKDGEIYTADLKSKALAFTMAH 230 + PIV S I+ +EA+ + E+S P I + + T ++ + A Sbjct: 205 VYQPIVSLSSGEILGWEALTRGPENSYFSNPDVIFSFAEEIELLCTTEMVCRETAINNFG 264 Query: 231 ALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAE 290 L K+ +N+ P T+ + L +++ L P+ I+ E TE I + F + Sbjct: 265 KLGPEQKLF-LNVNPRTMTDPNFVKGETLKKLEEYGLTPQNIVFEITEQHSIKNYYLFKK 323 Query: 291 AIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIK 350 ++ + G VA D GAGF+GL ++ +PD IK+ LI ++H + ++A+++++I Sbjct: 324 TVEHYRNQGYQVAADDVGAGFSGLQSIAEIRPDFIKVDMSLIRDIHINPVKEAVVESLIT 383 Query: 351 CCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 + QV A G+ + E L S G+ QG A+ Sbjct: 384 LAEKINSQVIAEGIESQNELNTLLSLGVHFGQGFYLAR 421 >UniRef50_C4ZNG3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZNG3_THASP Length = 905 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 66/230 (28%), Positives = 115/230 (50%), Gaps = 16/230 (6%) Query: 171 NDHFAFH--PIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQ-----RKDGEIYTADLKSKA 223 D F H P+ + R++A EA+V+ +++ + G+ + G I L Sbjct: 667 QDGFVLHYQPVHEAAGARMVAAEALVRMRDENGTITPPGEFIPLAEETGMILA--LGRWV 724 Query: 224 LAFTMAHA---LELGDKM-ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQII-VEFTE 278 L A L+LG +M +++NL +E ++ + A A +P +++ +E TE Sbjct: 725 LLAACREARRWLDLGREMQVAVNLSARQFNDE--GLAAHIRHCLAAAGLPARLLKLEITE 782 Query: 279 SEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKS 338 S V+ + A + +LKA +SV++D FG G + L L RF D++KI + + + + Sbjct: 783 SMVMRDVGQAARVLSTLKALDVSVSVDDFGTGHSSLACLRRFPLDQLKIDRSFVQDAAQD 842 Query: 339 GPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 AI++ II SL +Q A GV T E+ +L SAG ++ QG F++ Sbjct: 843 EDSAAIVRGIIALAGSLRLQTVAEGVETAEQVGFLRSAGCDLLQGYYFSR 892 >UniRef50_Q24PY1 Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense Y51 RepID=Q24PY1_DESHY Length = 719 Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 10/231 (4%) Query: 175 AFHPIVDPLSRRIIAFEAIVQ-KNEDSPSAIA---VGQRKDGEIYTADLKSKALAFTMAH 230 AF PI+D +S FEA+ + K S + IA K G++Y + + A + Sbjct: 181 AFQPILDVVSGEFFGFEALTRLKPPSSFAGIADLFPFAEKIGQLYPVETICRRTAILNSS 240 Query: 231 ALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAE 290 + +++ +N+ P L + + ++ L P +++E TE I+ + F E Sbjct: 241 QILRPKELLFLNVEPQVLTDPEFSSGQTRRLLETQGLTPSDVVLEITERSAIANYGTFRE 300 Query: 291 AIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIK 350 A++ + G +A+D GAG++ L ++ PD +KI + LI +H + A+ + + Sbjct: 301 ALEHYRKQGYLIALDDVGAGYSSLQSIAELHPDFLKIDRCLIQGIHLDPIKWALFETFVT 360 Query: 351 CCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPE 401 + ++ A GV T EE + G + QG AK PS PE Sbjct: 361 FSRRIGCRILAEGVETQEEMRTVVQLGADYVQGYFIAK------PSFTRPE 405 >UniRef50_B8F9D2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8F9D2_DESAA Length = 607 Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 65/221 (29%), Positives = 109/221 (49%), Gaps = 11/221 (4%) Query: 175 AFHPIVDPLSRRIIAFEAIVQ-KNEDS-PSAIAVGQRKDGEIYTADLKSKALAFTMAHAL 232 F PIVD + A+EA+ + K E S P+ ++ Q T L+ M A Sbjct: 45 VFQPIVDLHKGDVFAYEALSRIKGESSFPNTESLFQASQFFQKTLQLERVCQRSAMRKAE 104 Query: 233 ELG-DKMISINLLPMTLVNEPD----AVSFLLNEIKANALVPEQIIVEFTESEVISRFDE 287 +LG + INL P ++ P+ VS +L+E+ + ++II+E TE I + Sbjct: 105 DLGVTHPVCINLCP-SVFRTPECNHGGVSCMLDELFG---IRDKIIIELTERFCIRDDEL 160 Query: 288 FAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQA 347 F I + G +AID G+G+AGL +L++ +P +KI + LI + KS +Q ++ A Sbjct: 161 FKRTIDYYRQQGFRIAIDDLGSGYAGLKMLAQIEPFIVKIDRFLIAGIDKSTKKQMLLSA 220 Query: 348 IIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 + C + V A G+ T EE + + +++ QG A+ Sbjct: 221 FVTFCHKINALVVAEGIETKEELETVTAMKVDLGQGYFLAR 261 >UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WHK3_VEREI Length = 859 Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 48/150 (32%), Positives = 82/150 (54%), Gaps = 1/150 (0%) Query: 239 ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAA 298 IS+N+ +P V+ +L+++K++ P ++ +E TES ++ ++ + LK+ Sbjct: 688 ISVNVSARQF-RQPGFVAQVLHQLKSHGADPRRLKLELTESLLLGDIEDTIARMAQLKSE 746 Query: 299 GISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQ 358 G+ A+D FG G++ L L R D+IKI Q + V AI++ I+ SL++Q Sbjct: 747 GVGFALDDFGTGYSSLSYLKRLPLDQIKIDQSFVREVLADPNDAAIVRTILALAKSLDLQ 806 Query: 359 VSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 V A GV T + +L+ G E FQG LF + Sbjct: 807 VVAEGVETTGQLSFLQLHGCEGFQGYLFGR 836 >UniRef50_A4EWF4 Putative uncharacterized protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EWF4_9RHOB Length = 644 Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 64/229 (27%), Positives = 111/229 (48%), Gaps = 10/229 (4%) Query: 169 TINDHFAFH--PIVDPLSRRIIAFEAIVQ-----KNEDSPSAIAVGQRKDGEIYTADLKS 221 T+N F H P+V + +I +EA+++ N+ SPS + G I + Sbjct: 396 TLNKEFDVHYQPLVRSADQAVIGYEALLRLKDHDGNQISPSDFIPMAEETGLIEEIGRWT 455 Query: 222 KALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEV 281 A +LE G K+ +INL P T D V F+ + P + +E TE+ + Sbjct: 456 LQTAIGQMASLEEGKKL-AINLSP-TQYRSGDLVGFVQKALMDTGFPPNLLELEVTETLL 513 Query: 282 ISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPR 341 + + +LK G+S+A+D FG GF+ L L + + DR+KI + + + ++ R Sbjct: 514 LEDSMMIEMQLDTLKEMGVSIAMDDFGTGFSSLSYLWKHRFDRLKIDRSFVAALERNPER 573 Query: 342 -QAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 + II+ I+ L+++++A GV T + L G ++ QG LF +A Sbjct: 574 SREIIETIVLLGAKLDMEITAEGVETAAQAQLLTDLGCDVLQGYLFGRA 622 >UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q47FQ3_DECAR Length = 1093 Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 57/221 (25%), Positives = 105/221 (47%), Gaps = 9/221 (4%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQRKD--------GEIYTADLKSKALAFT 227 + P++D + RI ++EA+V+ + + Q GEI T L+ Sbjct: 859 YQPVIDLKTHRITSYEALVRWRHPTKGLVGPAQFITVAEESGLIGEIGTIVLRQACSQLR 918 Query: 228 MAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDE 287 ++++NL P+ N+P+ + ++ L P++I +E TE+ ++ + Sbjct: 919 SWIDEGFTSPILALNLSPIQF-NDPNLTEGICRILRDYDLTPDRIELEITETVIMQDGEL 977 Query: 288 FAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQA 347 +++L + G ++ID FG G++ L L RF D +KI + IT++ + +AI+ A Sbjct: 978 ALGTLQNLSSRGFRLSIDDFGTGYSSLAYLKRFPVDTLKIDRSFITDMTANENDRAIVTA 1037 Query: 348 IIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 I+ SL + V A GV T E++ L + QG AK Sbjct: 1038 IMALANSLHLSVIAEGVETKEQYDLLSALNCNFAQGYYMAK 1078 >UniRef50_C8WAS4 Diguanylate cyclase/phosphodiesterase n=3 Tax=Zymomonas mobilis RepID=C8WAS4_ZYMMN Length = 579 Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 60/230 (26%), Positives = 113/230 (49%), Gaps = 19/230 (8%) Query: 173 HFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFT 227 H + PI+ P +++I+ FEA+ + N + SP+ + G I L AL + Sbjct: 338 HLVYQPILSPYNKKIVGFEALARWNHETLGPVSPAEFIPVAEESGLI--VPLGRWALESS 395 Query: 228 MAHALELGDKM--------ISINLLPMTLVNEPDAVSFLLNEIKA-NALVPEQIIVEFTE 278 + H + DK +S+N+ + L+ D ++ L+ +IK + E++ +E TE Sbjct: 396 V-HTQQQWDKQAGYTLPIRVSVNVSALQLMR--DNLTQLITDIKKQTGINGERLTLELTE 452 Query: 279 SEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKS 338 S ++ ++ I ++ GI +++D FG G++ L L F D +KI + +TN+ + Sbjct: 453 SALMRYPEQSISVINTMHELGIKISMDDFGTGYSSLSYLKTFPIDHLKIDRSFVTNLAED 512 Query: 339 GPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 AI +AI ++L I+ G+ TPE+ + G + QG F++ Sbjct: 513 KTAIAITRAITSMASTLSIKTIVEGIETPEQKKIIMDLGCDYAQGFYFSR 562 >UniRef50_B5E7Y8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Geobacter RepID=B5E7Y8_GEOBB Length = 704 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 63/238 (26%), Positives = 107/238 (44%), Gaps = 23/238 (9%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQ-----RKDGEIYTADLKSKALAFTMAH 230 + P V S R++ EA+V+ N + G+ + G + D + M Sbjct: 470 YQPQVSNQSGRVVGIEALVRWNSKELGLVEPGRFLPLAEEIGLVIQID------QWVMRE 523 Query: 231 ALELGDKMISINLLPMTLVNEPDAVSFLLNEI--------KANALVPEQIIVEFTESEVI 282 A + P+TL F+ NE+ K + L P + +E TE ++ Sbjct: 524 ACRQHKLWLDAGFPPVTLAINISGQQFMKNELLETVTSVLKESGLDPGLLELELTEGVLM 583 Query: 283 SRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQ 342 + + + +++LK G+ +AID FG GF+ L L RF D +KI + I ++ Sbjct: 584 AHTERTVKTLQALKGMGVRLAIDDFGTGFSSLSYLKRFPLDVLKIDRTFINDITTDPDDA 643 Query: 343 AIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWP 400 AI A I+ +++++V A GV T + +L G +M+QG LF+K +PS P Sbjct: 644 AITLATIEMAHTMKLKVIAEGVETKPQLDFLTKNGCDMYQGYLFSKP----VPSTELP 697 >UniRef50_B6A161 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2304 RepID=B6A161_RHILW Length = 721 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 8/218 (3%) Query: 176 FHPIVDPLSRRIIAFEAIVQ-----KNEDSPSAIAVGQRKDGEIYTADLKSKALAFTMAH 230 F P+VD +R I EA+ + + + +P + G I L + L ++ Sbjct: 487 FQPLVDATTREIRGVEALARWKSATRGDVTPEVFISLAERAGLI--DQLGFEVLRLSVRE 544 Query: 231 ALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAE 290 A +++N+ P+ L N P S + + + P ++ +E TE +IS D+ Sbjct: 545 ASRWPGVGVAVNVSPLQLRN-PYFASQVGDILAQADFDPMRLTIEVTEGVLISNPDQAKR 603 Query: 291 AIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIK 350 A K+L+ GI +A+D FG G+A + L F DR+KI + LI + A++ A I Sbjct: 604 AFKTLRNMGIKIALDDFGCGYASIGALREFGFDRMKIDRSLIVALDHDDRDGAVLHATIA 663 Query: 351 CCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 +L + V+A G+ T E+ + +G + QG LF++ Sbjct: 664 LANALHLPVTAEGIETEEQAAAVRLSGCDELQGYLFSR 701 >UniRef50_C5D2J8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacillus sp. WCH70 RepID=C5D2J8_GEOSW Length = 568 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 64/220 (29%), Positives = 105/220 (47%), Gaps = 8/220 (3%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQ-----RKDGEIYTAD--LKSKALAFTM 228 + P +D +++I A EA+++ N I+ G + G I + +A Sbjct: 333 YQPQLDIKTKQIRAVEALIRWNHPEKGFISPGMFIPLAEESGLITPISDWIMMQACEHLK 392 Query: 229 AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEF 288 L +SIN+ P+ + D + L I++ + P I +E TES V+ ++ Sbjct: 393 QLQLRFPYVKMSINISPIYF-QQIDFLKKLQKTIESVNVNPRLIELELTESAVMPHAEQS 451 Query: 289 AEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAI 348 E + LK G+S+AID FG GF+ L L RF D +KI + + + AI++AI Sbjct: 452 VERLTKLKTMGMSIAIDDFGTGFSSLSYLHRFPIDILKIDRSFTKQLSRYQQDSAIVKAI 511 Query: 349 IKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 I SL+I+V A GV T +++ LE + QG +K Sbjct: 512 IMMAHSLQIRVVAEGVETKKQYQILEKQSCDFVQGYYVSK 551 >UniRef50_C8QYF1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QYF1_9DELT Length = 711 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 62/219 (28%), Positives = 109/219 (49%), Gaps = 11/219 (5%) Query: 176 FHPIVDPLSRRIIAFEAIVQ-KNED----SPSAIAVGQRKDGEIYTADLKSKALAFTMAH 230 + PIVD + +I+ FE++V+ +N D SP + + K+ +Y + + + T A Sbjct: 492 YQPIVDNRTGKIVKFESLVRLRNPDGQVLSP-VMFLDVVKESSLY-PEFTRRMVDKTFA- 548 Query: 231 ALELGDKMISINL-LPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFA 289 +L D +L L + + E + F++ +IKA+ + ++ E ESE + Sbjct: 549 --DLADCRYGFSLNLSIADIVEQEVQDFIMAKIKAHPEIARRLTFEILESEGVENIALVQ 606 Query: 290 EAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAII 349 I+ +KAAG +AID FG+G++ + +F+ D IKI LI N+H+ Q +++ I+ Sbjct: 607 SFIERVKAAGCQIAIDDFGSGYSNFAHILQFKVDSIKIDATLIRNIHQDQQAQVLVRTIV 666 Query: 350 KCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 C L I A V + E ++ GI+ QG K Sbjct: 667 DFCRQLGINTVAEFVHSEEVLQVVKELGIDYSQGYFLGK 705 >UniRef50_C6XE67 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XE67_METSD Length = 910 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 48/151 (31%), Positives = 78/151 (51%) Query: 239 ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAA 298 IS+N P+ N+ L+ +K LV + ++VE TE ++ ++ + + + A Sbjct: 749 ISVNKSPVQFKNDSSTHDQWLDYMKQLGLVGQSLVVEITEGLLLDTSQNVSKKLLAFRDA 808 Query: 299 GISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQ 358 GI VA+D FG G++ L L RF D IKI Q + N+ A+ ++II L + Sbjct: 809 GIQVALDDFGTGYSSLAYLRRFDIDYIKIDQSFVRNISTQPDDLALCESIIAMAHKLGLS 868 Query: 359 VSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 V A G+ T E+ L++AG + QG F+ A Sbjct: 869 VIAEGIETEEQCALLKAAGCDYGQGYWFSPA 899 >UniRef50_Q1PWQ6 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PWQ6_9BACT Length = 616 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 64/227 (28%), Positives = 111/227 (48%), Gaps = 21/227 (9%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNE----DSPSAIAVGQRKDGEIYTADLKSKALAFTMAHA 231 F PIV + ++A+EA+ + E ++P + K + D+ + A A Sbjct: 48 FQPIVCLATGNVVAYEALSRGPEASMFENPIFLFEVAEKLEMLEDLDMLCREKAIMNA-- 105 Query: 232 LELGDKMISINLLPMTLVNEPDAVSFLL---NEIKANALVPE------QIIVEFTESEVI 282 K++ +N P+ L DA ++ K L+ E +++E TE I Sbjct: 106 -----KILGMNTKPIKLFINIDAACITYSKHDKGKTKTLIEEFEFEMDNVVLEITERTFI 160 Query: 283 SRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQ 342 + F +A+ ++ G S+AID G+G AGL L+S P ++KI + L+ N+ KS +Q Sbjct: 161 NDSQIFHQALSHYQSQGFSIAIDDLGSGSAGLRLISEINPQKVKIDKFLVENIDKSFKKQ 220 Query: 343 AIIQAIIKCCTS-LEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 AI++ ++ C L ++ A G+ T EE+ ++ GI+ QG LF K Sbjct: 221 AIVKMLVDMCHRVLNSKIVAEGIETFEEFTTVKMLGIDWGQGYLFGK 267 >UniRef50_C0QTP8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Persephonella marina EX-H1 RepID=C0QTP8_PERMH Length = 599 Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 50/154 (32%), Positives = 87/154 (56%), Gaps = 2/154 (1%) Query: 239 ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAI-KSLKA 297 ISIN+ +T + + + + + +IK + + P++II+E TE+E +SR +A+ I ++LK Sbjct: 445 ISINI-EITDILRKNFIDYTIKKIKRSGVSPDKIILELTETEDMSRMIRYAQDILQTLKR 503 Query: 298 AGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEI 357 G ++ID FG+G++ L++ D IKI LI N+ KS I+++II L I Sbjct: 504 EGFYISIDDFGSGYSNFSYLTKLPVDIIKIDGSLIKNLEKSRKNLLIVKSIISMSKLLGI 563 Query: 358 QVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 + A V + E + +E+ G++ QG K K Sbjct: 564 ETVAEFVNSREIYQIVENLGVDYVQGFYIDKPKF 597 >UniRef50_A1TLA7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Acidovorax RepID=A1TLA7_ACIAC Length = 850 Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 44/139 (31%), Positives = 76/139 (54%) Query: 250 NEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGA 309 +PD V LL ++ + P + +E TES +++ ++ ++ L+A G+ AID FG Sbjct: 697 RQPDFVDQLLQTLRRSGAQPRLLKIELTESLLMADVEDVIARMEQLRAHGVGFAIDDFGT 756 Query: 310 GFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEE 369 G++ L L R D++KI Q + +V AI++ I+ SL+++V A GV T + Sbjct: 757 GYSSLAYLKRLPLDQLKIDQSFVRDVLTDPNDAAIVRTILALARSLDLEVVAEGVETTGQ 816 Query: 370 WMWLESAGIEMFQGDLFAK 388 +L+ G + FQG LF + Sbjct: 817 LKFLQRHGCKAFQGHLFGR 835 >UniRef50_A0L8L0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8L0_MAGSM Length = 714 Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 52/163 (31%), Positives = 84/163 (51%), Gaps = 3/163 (1%) Query: 228 MAHALELG--DKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 +AH LG ++S NL P V + + + + + + P + +E TES V+ Sbjct: 533 IAHLQALGFPPVVVSANLSPRQFVQD-GLLQVVQQALVQHGIDPCWLELEITESSVMGSV 591 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 D+ E +KSL A G+ +A+D FG G++ L L RF +K+ + + V K QAI+ Sbjct: 592 DQATELLKSLVALGVHIALDDFGTGYSSLAYLKRFPFHTLKVDRAFVQTVEKDRADQAIL 651 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 QAI+ +LE+QV A GV + ++ AG QG ++K Sbjct: 652 QAIVSLARNLELQVVAEGVENEGQRDFITQAGCHSIQGFYYSK 694 >UniRef50_B1QWP0 Sensory box/ggdef family protein n=2 Tax=Clostridium butyricum RepID=B1QWP0_CLOBU Length = 260 Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 63/229 (27%), Positives = 112/229 (48%), Gaps = 15/229 (6%) Query: 171 NDHFA-FHPIVDPLSRRIIAFEAIVQ-KNEDS---PSAIAVGQRKDGEIYTADLKSKALA 225 N+ F + P V S ++ + EA+++ K +S P ++G +Y D+ Sbjct: 22 NEFFTLYQPKVYSESGKLASIEALIRWKRNNSIIYPLEFIPMCEENGLVYDIDMYMIRQV 81 Query: 226 FTMAHALELGDKMI---SINLLPMTLVNEP--DAVSFLLNEIKANALVPEQIIVEFTESE 280 T + L+ +K I S+N+ TL+ E D + L + N V E TE Sbjct: 82 VTQINELKKNNKKIIPISVNIYKGTLMEENFIDTIDELFGNMNINNYVE----FEITERG 137 Query: 281 VISR-FDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSG 339 +++ D+ AE K LK +A+D +G G + LL L++ D IK+ + +I+N+H++ Sbjct: 138 ILTEDIDKIAEVFKKLKERNFRIAVDDYGTGSSNLLFLAKTNVDIIKLDKSIISNIHENT 197 Query: 340 PRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 Q II+A+I L+ + GV +E+ +L+ G ++ QG F+K Sbjct: 198 KAQYIIEALITLSKKLDADLVVEGVENIKEFKFLKDIGCKIIQGYYFSK 246 >UniRef50_C5RNW2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Clostridium cellulovorans 743B RepID=C5RNW2_CLOCL Length = 631 Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 44/151 (29%), Positives = 83/151 (54%), Gaps = 1/151 (0%) Query: 238 MISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKA 297 ++ IN+ P ++ + V L+N+I+A + P+ I +E TE+ +S + + ++ L Sbjct: 465 VVGINMSPKQIITDK-FVENLMNKIEAKKITPKWIDIEITETSAMSSNESMEKILEKLAT 523 Query: 298 AGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEI 357 GIS++ID FG G++ L + RF DR+KI++EL+ N++ I++AII + + Sbjct: 524 IGISISIDDFGTGYSSLSYIKRFDIDRLKIAKELVDNIYNDHNTLLIVKAIIMMAKGMGL 583 Query: 358 QVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 + A GV + L+ + QG L+ + Sbjct: 584 KAIAEGVEEESQLEMLKELECDEIQGYLYGR 614 >UniRef50_Q2BMC3 Hybrid signal transduction histidine kinase and diguanylatecyclase/phosphodiesterase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMC3_9GAMM Length = 582 Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 13/226 (5%) Query: 173 HFAFHPIVDPLSRRIIAFEAIV-----QKNEDSPSAIAVGQRKDG---EIYTADLKSKAL 224 H + P VD +++R+ EA++ +K SP+ + G EI T L+ Sbjct: 339 HLVYQPQVDGIAKRVCGAEALLRWTHPEKGFVSPAVFIPLAEESGLMVEIGTCVLREACK 398 Query: 225 AFTMAHALELGDKMISINLLPMTLVNEP--DAVSFLLNEIKANALVPEQIIVEFTESEVI 282 + + + IS+N+ +E V +L E +A VPE I++E TES + Sbjct: 399 QSVIWKSQGVEKLTISVNISGKQFRSEDFLGTVKSVLAETQA---VPEMIMLEITESLAM 455 Query: 283 SRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQ 342 S D+ E + L+A G+ V++D FG G++ L L F D +KI + + + + Q Sbjct: 456 SDVDKTVELLADLRALGLEVSVDDFGTGYSSLSYLKDFPIDELKIDKAFVDGLPNNKGDQ 515 Query: 343 AIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 AI AI+ L ++ A GV + +L + G ++ QG F+K Sbjct: 516 AIASAIVTMAKKLGYKIVAEGVEELPQVDYLNALGCDLIQGYYFSK 561 >UniRef50_C9QEK6 Putative diguanylate phosphodiesterase (EAL domain) n=1 Tax=Vibrio orientalis CIP 102891 RepID=C9QEK6_VIBOR Length = 739 Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 49/155 (31%), Positives = 86/155 (55%), Gaps = 4/155 (2%) Query: 235 GDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKS 294 D I+IN+ P L EPD + L + ++++ + PEQ+ +E TE+ + D+ +A+ Sbjct: 572 ADITIAINVSPAQL-EEPDFCADLKSAMQSSHIPPEQVEIEVTETIAANNLDDIQQALNR 630 Query: 295 LKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTS 354 ++A G VAID FG GF+ L +L R+KI + + + + +I + I+ + Sbjct: 631 VRALGCKVAIDDFGTGFSSLSILHTLPATRLKIDRTFVDAMEQD---DSIAKMIVNLGQT 687 Query: 355 LEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 L ++V+A G+ T ++ L++ E QG LFAKA Sbjct: 688 LGMEVTAEGIETQAQYQQLKAFNCEEGQGWLFAKA 722 >UniRef50_C6B0E8 Diguanylate cyclase/phosphodiesterase n=9 Tax=Rhizobium RepID=C6B0E8_RHILS Length = 653 Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 64/220 (29%), Positives = 111/220 (50%), Gaps = 11/220 (5%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEI--YTADLKSKALAFTM 228 + PIV+ S R++A+EA+ + + SP A + I T L +KAL Sbjct: 412 YQPIVELRSGRVVAYEALARWDSARFGRISPDAFIPAAERTAVIGRITRILFAKALE--- 468 Query: 229 AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEF 288 A A+ +S NL + + +++ LL I + + P++I E TE+ ++S FD Sbjct: 469 ALAIIPRHLRLSFNLSARDICDHETSMA-LLAMITRSGIDPKRIEFEITETALLSDFDTA 527 Query: 289 AEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAI 348 + I L+AAGIS+A+D FG G++ L + R D++KI + + N + I +++ Sbjct: 528 DQVISMLRAAGISIALDDFGTGYSSLSHIHRLGFDKLKIDKSFVMNFDRDARCMNITRSV 587 Query: 349 IKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 C +L I A GV + E L++ G+ + QG F++ Sbjct: 588 ANLCQNLGIASVAEGVESEEIAEGLKAMGVRLAQGYHFSR 627 >UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z192_9NEIS Length = 943 Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 47/150 (31%), Positives = 78/150 (52%), Gaps = 1/150 (0%) Query: 239 ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAA 298 +++NL + + D L + A+ LV + VE TES ++ + I +K+ Sbjct: 770 LAVNLSTLQF-RQQDLAVHLQRALSAHGLVGSDLDVEVTESVIMDDVETTIHTIDRIKSM 828 Query: 299 GISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQ 358 G+ ++ID FG G++ L L RF+ D++KI + + ++ AI +AII +L + Sbjct: 829 GLQLSIDDFGTGYSSLSYLKRFKADKLKIDRSFVRDIPMDADDSAIARAIINMAKNLNMT 888 Query: 359 VSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 V A GV T E+W +L+ G QG L AK Sbjct: 889 VIAEGVETIEQWKFLDREGCHAAQGYLLAK 918 >UniRef50_B6QZU6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QZU6_9RHOB Length = 678 Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 73/127 (57%) Query: 262 IKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQ 321 ++ + L PE++ +E TES +I+ +++K + G+S+A+D FG G++ L LSRF Sbjct: 521 LQESGLAPERLEIEITESLLIADTTSVVKSLKKIGDMGVSIAMDDFGTGYSSLSYLSRFP 580 Query: 322 PDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMF 381 ++IKI + I N+ K AI+ AII SL++ ++A GV + L + G ++ Sbjct: 581 FNKIKIDRSFIMNIGKDAHTDAIVAAIIGLGRSLDVLITAEGVEDEMQAQILRAGGCDIV 640 Query: 382 QGDLFAK 388 QG F K Sbjct: 641 QGYYFGK 647 >UniRef50_A4C7I2 Signaling protein (EAL,CBS,GGDEF domains) n=2 Tax=Alteromonadales RepID=A4C7I2_9GAMM Length = 596 Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 56/217 (25%), Positives = 102/217 (47%), Gaps = 5/217 (2%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDSP----SAIAVGQRKDGEIYTADLKSKALAFTMAHA 231 F PI D + I+ +EA+ + + P + + + + G++ +L + A Sbjct: 22 FQPIFDLANSCILGYEALSRGPKGHPLEFPNQLFLAAEQQGKVSELELLCRKKAIENFAL 81 Query: 232 LELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEA 291 L L K+ +N+ P TL++ + ++ + L Q+++E TE + + + Sbjct: 82 LGLSGKLF-LNVSPRTLLDPKHPKGETQHLLEQHGLSAAQVVIEVTEQDEVPNHQLLQQT 140 Query: 292 IKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKC 351 + + G S+AID GAG +GL S QPD IKI + I + H+S ++ +++II Sbjct: 141 LAYYRELGFSIAIDDLGAGHSGLRKWSELQPDIIKIDKYFIDHCHQSIVKKEFLKSIIDL 200 Query: 352 CTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 + QV A G+ EE L G+ + QG L + Sbjct: 201 AKATNTQVIAEGIEHQEELDLLTGLGVSLAQGFLLER 237 >UniRef50_P73380 Slr2077 protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=P73380_SYNY3 Length = 732 Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 61/222 (27%), Positives = 110/222 (49%), Gaps = 10/222 (4%) Query: 176 FHPIVDPLSRRIIAFEAIV-----QKNEDSPSA-IAVGQRKDGEIYTADLKSKALAFTMA 229 + PI+ ++ R+ FEA++ +K +P IA+ + I + +A Sbjct: 497 YQPIISLVNDRLQGFEALIRWQHPEKGYINPEQLIAIAEETGLIIILGQWIMQQACQQIA 556 Query: 230 HALELG--DKM-ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFD 286 E+ DK+ +SINL P + P V + N ++ L + +++E TE +I + Sbjct: 557 QWREITNDDKIYVSINLSPNQIC-RPLFVEEIENILQTTKLDGDALVLEITEGVLIQHLE 615 Query: 287 EFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQ 346 AE +K +K+ GI ++ID FG G++ L L R + +KI + I + + P Q+I++ Sbjct: 616 IVAECLKKIKSHGIKISIDDFGTGYSSLSYLYRLPVNYLKIDRSFINQITEDSPSQSIVK 675 Query: 347 AIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 II L+IQ A GV T ++ L+ G + QG +++ Sbjct: 676 TIITLGDLLDIQTVAEGVETNDQLNLLKKMGCGLGQGYFWSE 717 >UniRef50_C1CZV1 Putative uncharacterized protein n=1 Tax=Deinococcus deserti VCD115 RepID=C1CZV1_DEIDV Length = 840 Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 63/241 (26%), Positives = 113/241 (46%), Gaps = 16/241 (6%) Query: 171 NDHFAFH--PIVDPLSRRIIAFEAIVQKNE-----DSPSAIAVGQRKDGEIYTADLKSKA 223 N F H P+VD S ++++ EA+++ N SP+ + G+I + Sbjct: 602 NGEFELHYQPVVDDPSGQVVSAEALLRWNSAVHGPQSPAVFIPLLERSGQIVR--VGEWV 659 Query: 224 LAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVIS 283 L A G +++NL + + D + + + + ++ L PEQ+ +E TES ++ Sbjct: 660 LHEACRAAAGWGGVRVAVNLSALQFAS-GDLIGTVRSALDSSGLPPEQLELEITESLMMQ 718 Query: 284 RFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELI----TNVHKSG 339 A+ + L++ G+ V +D FG G++ L + F +KI +E + T G Sbjct: 719 NPTRTADLLDRLRSLGVGVMLDDFGTGYSSLSYIHHFALSGVKIDREFVRQLDTETRARG 778 Query: 340 PRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAW 399 Q II+A+++ C L ++V A G+ T + L + QG LFA+ LN P+ Sbjct: 779 --QVIIRAVVQICGDLGLKVVAEGIETQAQREVLREMSVSQMQGFLFARPALNWTPASWL 836 Query: 400 P 400 P Sbjct: 837 P 837 >UniRef50_C5SMP6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(S) n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SMP6_9CAUL Length = 929 Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 49/150 (32%), Positives = 81/150 (54%), Gaps = 1/150 (0%) Query: 239 ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAA 298 +++NL P+ L + PD V + + + L P ++ +E TES +I ++ +K Sbjct: 765 VAVNLSPVQLTH-PDLVGMVQSILIETGLSPRRLELEITESTIIGDKARALHILRQIKGF 823 Query: 299 GISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQ 358 G+++AID FG G++ L L+ F D+IKI + + +S +AII+AI+ SLE+ Sbjct: 824 GVTIAIDDFGTGYSSLDTLNAFPFDKIKIDRSFLMEAEQSPQARAIIRAILALGRSLEVP 883 Query: 359 VSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 V A GV T + L S G + QG F + Sbjct: 884 VLAEGVETVAQLELLRSEGCDEAQGYYFGR 913 >UniRef50_B9QV02 Cyclic diguanylate phosphodiesterase domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QV02_9RHOB Length = 658 Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 66/240 (27%), Positives = 111/240 (46%), Gaps = 13/240 (5%) Query: 158 DKELDSCALSPTIND--HFAFHPIVDPLSRRIIAFEAIVQKNEDSPSAIA------VGQR 209 D E+ S L D H AF PI+D I+ E + + + IA + +R Sbjct: 393 DTEILSALLDEETRDGLHLAFQPIIDITCNSILGVECLARWHHPQLGNIAPVDFIPLAER 452 Query: 210 KDG-EIYTADLKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALV 268 + + DL KAL+ A L +S NL L + V FL + +K + + Sbjct: 453 SGVINLISLDLFEKALSEAKAWPESL---RLSFNLSASNLSSRRFIVEFL-SILKQSGID 508 Query: 269 PEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKIS 328 P+++ E TE+ V+ F E A+ +LK AG+ +++D FG G++ L + R D IKI Sbjct: 509 PQRLSCEVTETSVMWDFKETRRALDTLKGAGVRISLDDFGTGYSSLSHVHRLPLDCIKID 568 Query: 329 QELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 + ++++ I+++++ + I GV T +E L+ G QG LF+K Sbjct: 569 RSFVSDLCPGSTGYGIVKSLLALSRDMAISCVVEGVETDDELSILKDLGASFVQGYLFSK 628 >UniRef50_UPI00018509AB hypothetical protein Bcoam_03339 n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI00018509AB Length = 153 Score = 81.3 bits (199), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 43/134 (32%), Positives = 75/134 (55%), Gaps = 3/134 (2%) Query: 261 EIKANALVPE-QIIVEFTESEVISRFD--EFAEAIKSLKAAGISVAIDHFGAGFAGLLLL 317 EI N V E I++E +E E +S + E +K L+A G+ +A+D G G++GL L Sbjct: 12 EILPNLHVGEATIVLELSEREGLSGYSKLEVVRKMKELRAKGMKIAVDDIGKGYSGLHTL 71 Query: 318 SRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAG 377 + +PD +KI ++L+ ++ RQ +++A+I+ + + A G+ T EW + ++ G Sbjct: 72 AMVEPDFVKIDRDLVKDIEVDSYRQHMMRALIEYWKQQNVHIIAEGIETESEWSFFKTLG 131 Query: 378 IEMFQGDLFAKAKL 391 + FQG F K L Sbjct: 132 VRYFQGYYFHKPNL 145 >UniRef50_Q13MY6 Diguanylate cyclase/phosphodiesterase n=3 Tax=Proteobacteria RepID=Q13MY6_BURXL Length = 667 Score = 81.3 bits (199), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 61/220 (27%), Positives = 102/220 (46%), Gaps = 11/220 (5%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDSPSAI------AVGQRKDG-EIYTADLKSKALAFTM 228 F PI D S+ I+AFEA+ + S I A ++ D T L KAL Sbjct: 425 FQPIFDISSKGIVAFEALARWTSPSLGTIPPVDFLAAAEKTDMIHSMTHVLLRKALE--- 481 Query: 229 AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEF 288 A A I+ NL V+ P+A+ ++ A+ + PE+I E TE+ +I Sbjct: 482 AAATWPPQMRIAFNLSARD-VSSPEAIDGVIRTALASGVAPERINFEVTETALIKNVSSA 540 Query: 289 AEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAI 348 E + +LK G +++D FG G++ L + R D++K+ + I ++ +A++++I Sbjct: 541 CETLGALKKLGAEISLDDFGTGYSSLSYVHRLPIDKLKVDRSFIADIVDDAAARAVVKSI 600 Query: 349 IKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 + C +L + GV T + L G + QG F K Sbjct: 601 VDLCRNLGLTCVVEGVETASQVSVLRGLGCTVMQGYFFGK 640 >UniRef50_A4W933 Diguanylate cyclase/phosphodiesterase n=3 Tax=Enterobacteriaceae RepID=A4W933_ENT38 Length = 642 Score = 81.3 bits (199), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 65/220 (29%), Positives = 105/220 (47%), Gaps = 11/220 (5%) Query: 176 FHPIVDPLSRRIIAFEAIVQ-----KNEDSPSAIAVGQRKDGEIYTADLKSKALAFTMAH 230 + PIVD ++ I ++EA+++ K SP K G I +A A Sbjct: 415 YQPIVDSFTQEIYSYEALIRWIHPLKGILSPDTFIPVAEKTGMINEMGKSMLEMACREAV 474 Query: 231 ALELGDKMISINLLPMTLVNEPDA--VSFLLNEIKANALVPEQIIVEFTESEVISRFDEF 288 + + K IS+N+ P+ L ++ A V +LNE L E++ +E TES + + Sbjct: 475 SWVIPAK-ISVNVSPVQLSSKAFAGIVVSILNE---TGLSAERLELEVTESSLFTESKTP 530 Query: 289 AEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAI 348 + L+ G+ ++ID FG G++ L LSR D+IKI + + +V II+ I Sbjct: 531 MNTLNRLRTLGVKISIDDFGTGYSSLSRLSRLAFDKIKIDKSFVNSVSTQEDALNIIRLI 590 Query: 349 IKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 SL ++ A GV T E+ L++ G + QG LF K Sbjct: 591 TGMAKSLNMKTVAEGVETQEQLESLQALGCDFIQGYLFGK 630 >UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1T5E1_9BURK Length = 1055 Score = 81.3 bits (199), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 48/150 (32%), Positives = 78/150 (52%), Gaps = 1/150 (0%) Query: 239 ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAA 298 +S+NL + + + ++ + L P + +E TES ++ +E + L A Sbjct: 885 VSVNL-SARVFQQRNIAKLVMQVLAETGLEPRYLELELTESTIMRNAEEAVLMLNELHAL 943 Query: 299 GISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQ 358 GI +AID FG G++ L L RF DR+KI + ++++ SG + I AII SL++Q Sbjct: 944 GIGLAIDDFGTGYSSLSYLKRFPVDRLKIDRSFVSDIGVSGDDETITSAIIALAHSLKLQ 1003 Query: 359 VSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 V A GV T + +L+ + QG FAK Sbjct: 1004 VIAEGVETSAQLDFLKERACDEMQGFYFAK 1033 >UniRef50_B7KTV8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Methylobacterium extorquens group RepID=B7KTV8_METC4 Length = 772 Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 47/152 (30%), Positives = 81/152 (53%), Gaps = 1/152 (0%) Query: 239 ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAA 298 IS+N+ P+ + D +L + ++ L P ++ VE TE+ +I D E ++ +++ Sbjct: 601 ISVNVSPVQFRSR-DLPQVILAALTSSGLAPARLEVEVTEAVLIDDADTALEILRQIRSL 659 Query: 299 GISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQ 358 G+ VA+D FG G++ L L RF D+IKI + + + Q I+QAI L + Sbjct: 660 GVRVALDDFGTGYSSLSYLRRFPFDKIKIDRSFVQELDTRHDSQVIVQAIRDMAQGLGMT 719 Query: 359 VSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 V+A GV T ++ L G E QG L+++ + Sbjct: 720 VTAEGVETDDQAKRLRQTGCEELQGFLYSRPR 751 >UniRef50_B9R2A8 Cyclic diguanylate phosphodiesterase domain protein n=2 Tax=Labrenzia RepID=B9R2A8_9RHOB Length = 685 Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 50/153 (32%), Positives = 80/153 (52%), Gaps = 4/153 (2%) Query: 236 DKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSL 295 D IS+N+ P L ++P+ + +++ P +II+E TE+ V+ + A+ L Sbjct: 517 DISISMNVSPWQL-SDPEFTALMMDLPDLYGCDPTKIILEITENVVLGEIPDALTALNEL 575 Query: 296 KAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSL 355 K G S+ ID FG G++ L L + D IKI + I ++ G AI++ I+ +L Sbjct: 576 KIIGYSIVIDDFGTGYSNLAYLYNYPIDGIKIDRIFINDISNGG---AIVKLILSLADAL 632 Query: 356 EIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 V A GV T E+ WL G + FQG L++K Sbjct: 633 GATVVAEGVETIEQRDWLTENGCDRFQGYLYSK 665 >UniRef50_B1M823 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M823_METRJ Length = 785 Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 52/224 (23%), Positives = 108/224 (48%), Gaps = 9/224 (4%) Query: 173 HFAFHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQ-----RKDGEIYTADLKSKALAFT 227 + AF P++ + RII +EA+++ + A++ + + G+I + + L Sbjct: 552 YLAFQPVIALVDDRIIGYEALIRWDHPKLGAVSPARFIPLAEETGQIIP--IGAWVLQEA 609 Query: 228 MAHALEL-GDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFD 286 A L D +++N+ P+ P +S L + + L E++ +E TE+ ++ Sbjct: 610 CRQAARLPNDVYVAVNVSPVQF-RSPQLLSDLTQALARSGLPAERLEIELTETAIVEDGP 668 Query: 287 EFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQ 346 A+ + +++ G++VA+D FG G++ L L F DRIK+ + + A+++ Sbjct: 669 RIAKILAAIRRLGVTVAMDDFGTGYSSLAHLRDFPLDRIKVDRSFVATAETDRHSLAVLK 728 Query: 347 AIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 I+ +L++ + A GV TP + + G + QG L + + Sbjct: 729 GIMHIAKALDVVLQAEGVETPSQLALMREIGCDAIQGYLIGRPQ 772 >UniRef50_B5W1G7 Diguanylate cyclase/phosphodiesterase n=3 Tax=Oscillatoriales RepID=B5W1G7_SPIMA Length = 366 Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 63/226 (27%), Positives = 108/226 (47%), Gaps = 19/226 (8%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQ-----RKDGEI--------YTADLKSK 222 + PIV+ ++RI EA+V+ +A G G I +TA + Sbjct: 137 YQPIVNIKNQRIQGLEALVRWQHPERGLLAPGHFINIAENTGLIIPIGRWLLHTACQQLA 196 Query: 223 ALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVI 282 H +S+ L + L+ + D V N +K N+LV +E TES ++ Sbjct: 197 EWENQFPHHFLKMSVNLSVKQLDIFLLEQLDEVLNNYN-LKQNSLV-----LEITESMLV 250 Query: 283 SRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQ 342 + ++ + + +KA GI ++ID FG G++ L L + + +KI + ++ + S Q Sbjct: 251 ANIEKTCDLLNQIKAKGIGLSIDDFGTGYSSLSYLHQLPVNSLKIDRSFVSPANLSDRHQ 310 Query: 343 AIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 I ++II L++ V A GV TPE++ WL+ G E QG LF++ Sbjct: 311 VIAKSIIALSKLLKLHVIAEGVETPEQFHWLKKLGCEAAQGYLFSR 356 >UniRef50_C0BX39 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BX39_9CLOT Length = 990 Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 66/223 (29%), Positives = 109/223 (48%), Gaps = 14/223 (6%) Query: 173 HFAFHPIVDPLSRRIIAFEAIVQ---KNEDSPSAI---AVGQRKDGEIYTADLKSKALAF 226 ++AF PIV + I A+EA+++ +N SP+ + A+ Q + +I + +AL Sbjct: 744 NYAFQPIVSTIDGSIFAYEALMRPMMENLSSPADVMRLAIAQSRLPDIEKLTFR-RALED 802 Query: 227 TMAHALELGDKMISINLLPMTLVNEPDAVS-FLLNEIKANALVPEQIIVEFTESEVISRF 285 + GD+ + IN +P +++E F +I A LV E I E T+ ++ Sbjct: 803 YASQRDAFGDRKLFINSIPNQILSEELMYGLFERYQIGAGMLVVEMIESEQTDIGIME-- 860 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 + I+ LK +A+D FGAG++ L QPD +KI ++ ++HK RQA+ Sbjct: 861 ----DKIQMLKEFQAELAVDDFGAGYSSESTLLYMQPDYVKIDMSIVRDIHKDKDRQALA 916 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 + + I+V A GV T E L S GI+ QG A+ Sbjct: 917 VSTLNYARPRGIKVIAEGVETAAEMETLISLGIDYLQGFYVAR 959 >UniRef50_A6LWF3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LWF3_CLOB8 Length = 821 Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 62/226 (27%), Positives = 109/226 (48%), Gaps = 18/226 (7%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDSPSAIA------VGQRKDGEIYTADLKSKALAFTMA 229 F PIV+ + I EA+++ +++ I+ + ++ A L + + Sbjct: 603 FQPIVNNSLKTIEKCEALIRMIDENGKVISPYFFLDIAKK-------AGLYKELTIIMLE 655 Query: 230 HALELGDKM---ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFD 286 E+ +K ISINLL ++N + + ++ ++K PE+I+ E ESE I F+ Sbjct: 656 KTFEVLNKTNYEISINLLLQDIMN-SEIRALIIKKLKK-VRNPEKIVFEIVESEGIENFN 713 Query: 287 EFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQ 346 E E IK +K G +AID FG G++ L + D IKI +I NVHK + + + Sbjct: 714 EVTEFIKEIKKYGSKIAIDDFGTGYSNFNYLMKLNVDYIKIDGSIIKNVHKDKSAEIVTK 773 Query: 347 AIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLN 392 I+ L I+ A V+ E + +++ ++ QG F++ K N Sbjct: 774 TIVLFAKELGIETIAEFVSEEEIYNKIKALNVDYSQGYYFSEPKEN 819 >UniRef50_Q2BLE3 C-di-GMP phosphodiesterase A-related protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLE3_9GAMM Length = 821 Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 52/154 (33%), Positives = 83/154 (53%), Gaps = 5/154 (3%) Query: 237 KMISINLLPMTL--VNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKS 294 + +++N+ P+ V+ D VS LL+E + E +E TE+ +++ F+ ++ +K Sbjct: 636 RRLAVNVSPLQFMQVDFVDRVSTLLDESGIPGFMLE---LEITENMLLNNFEIASQKMKL 692 Query: 295 LKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTS 354 LK G+S AID FG G++ L L D +KI + +T++ + AI+Q II Sbjct: 693 LKKKGVSFAIDDFGTGYSSLKYLRHLPLDILKIDRSFVTDLRPHSEQAAIVQVIIATADR 752 Query: 355 LEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 L++ V A GV T EE L G FQG LF+K Sbjct: 753 LDLVVIAEGVETTEECNTLSQLGCNCFQGYLFSK 786 >UniRef50_B9ZPK3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZPK3_9GAMM Length = 842 Score = 80.9 bits (198), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 62/228 (27%), Positives = 108/228 (47%), Gaps = 10/228 (4%) Query: 171 NDHFAFH--PIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYT-ADLKSK 222 +D A H P++D S + A EA+++ N+ PS +G I D + Sbjct: 600 HDQLALHFQPLIDAHSGAVTAAEALLRWNDPELGAVPPSRFIPSAEANGLILPLGDWVIR 659 Query: 223 ALAFTMAHALELG-DKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEV 281 +A +L D I IN+ + +PD VS L +K PE + +E TE+ Sbjct: 660 RACQQLADWAQLDVDTSICINVSALQF-RQPDLVSRLAAALKEAGASPEHLEIEVTETVA 718 Query: 282 ISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPR 341 ++ E + LKA G+ V++D FG G++ L L D+IKI + I + Sbjct: 719 MADVALTREHLSGLKALGVRVSLDDFGTGYSSLAYLKSLPIDKIKIDRSFIAGIGHDRDA 778 Query: 342 QAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 + I+++++ SL +++ A GV T E+ +L G +++QG ++ A Sbjct: 779 EMILRSVMGLGHSLHLKLVAEGVETAEQLAFLRREGCDLYQGWFYSPA 826 >UniRef50_B5ZY05 Diguanylate cyclase/phosphodiesterase n=11 Tax=Rhizobium RepID=B5ZY05_RHILW Length = 709 Score = 80.9 bits (198), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 57/217 (26%), Positives = 105/217 (48%), Gaps = 7/217 (3%) Query: 176 FHPIVDPLSRRIIAFEAIVQ----KNEDSPSAIAVGQRKDGEIYTADLKSKALAFTMAHA 231 F P+V + + EA+ + SP + G I L L ++ HA Sbjct: 479 FQPLVSATTGAVTGLEALARWRTSTGNISPEIFIPLAERCGLIDA--LGVHMLRTSIEHA 536 Query: 232 LELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEA 291 D +S+N+ P+ L N P+ + +++ ++ P+++ +E TE +++ D+ + Sbjct: 537 RSWPDLALSVNVSPIQLCN-PEFAAEVISVLQELDFDPKRLTLEITEGVLMTNPDQARRS 595 Query: 292 IKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKC 351 I LK GI A+D FG G+A + L +F DR+KI + L++ + + +++A I Sbjct: 596 IDQLKRVGIKFALDDFGCGYASIGALRQFGFDRMKIDRSLVSALDEGANGADVLRATISL 655 Query: 352 CTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 T+L+I V+A G+ + L AG + QG L + Sbjct: 656 ATALQIPVTAEGIENSRQAAILREAGCDQLQGYLIGR 692 >UniRef50_Q163Y3 GGDEF/EAL domain protein n=2 Tax=Roseobacter RepID=Q163Y3_ROSDO Length = 681 Score = 80.9 bits (198), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 54/147 (36%), Positives = 81/147 (55%), Gaps = 5/147 (3%) Query: 239 ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAE-AIKSLKA 297 IS+N P TL +P LL ++A L P + VE ES +I D+ A I++L Sbjct: 511 ISVNASPPTL-RDPHLTDRLLQAVRARHLPPSVLTVEVLESTLIENDDDMALLTIENLSK 569 Query: 298 AGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPR-QAIIQAIIKCCTSLE 356 AG SV +D FG G+A + LSR + D IK+ Q L+ V + PR +II A++ ++L Sbjct: 570 AGFSVVLDDFGTGYASMSNLSRLRLDGIKLDQSLVLPVPE--PRADSIISALVTLSSNLN 627 Query: 357 IQVSAMGVATPEEWMWLESAGIEMFQG 383 ++V A GV TP + + G ++ QG Sbjct: 628 MRVVAEGVETPAHFKTVRRLGCDVVQG 654 >UniRef50_C0D0Y7 Putative uncharacterized protein n=2 Tax=Clostridium RepID=C0D0Y7_9CLOT Length = 890 Score = 80.9 bits (198), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 43/156 (27%), Positives = 81/156 (51%), Gaps = 1/156 (0%) Query: 236 DKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSL 295 D M+S+NL + L+ E D ++ ++ L P + +E TES ++ + + + Sbjct: 725 DFMVSVNLSYVELM-ERDVFPAVMGALEEFGLPPANVTLELTESCMVKEDKQVNKIMGRF 783 Query: 296 KAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSL 355 + AG+ VA+D FG G++ L L D +KI + +T + + G +I+++ + C + Sbjct: 784 REAGLKVAMDDFGTGYSSLNSLKNIPADVVKIDRSFVTGITEEGYNATLIRSVAQLCRQV 843 Query: 356 EIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 +++V GV T EE + G+E+ QG F + L Sbjct: 844 DMRVCVEGVETEEEHSAVRGMGVELIQGYYFGRPML 879 >UniRef50_B0CCG3 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains), putative n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0CCG3_ACAM1 Length = 581 Score = 80.9 bits (198), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 67/235 (28%), Positives = 114/235 (48%), Gaps = 10/235 (4%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTAD-LKSKALAFTMA 229 F PIV +RII FEA+V+ SP + G I+ D K F + Sbjct: 342 FQPIVCLADQRIIGFEALVRWMHPRLGMVSPLEFIPIAEETGLIFEIDQWMLKEACFRIQ 401 Query: 230 HALELGDKMISINL-LPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEF 288 ++ +SI++ ++PD VS + + + P+Q+++E TES + SR Sbjct: 402 QWRRFTEEPLSISVNFSAKQFDQPDLVSQVRQVLLETRISPQQLMIEITESVLFSRDQAA 461 Query: 289 AEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAI 348 + + LK G+S+ ID FG G+A L L + D +KI + I + ++++I Sbjct: 462 IDTLHQLKNMGVSLCIDDFGTGYASLQYLQQLPVDTLKIDRSFIKRMDVDNL--DLVRSI 519 Query: 349 IKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEKK 403 I+ L + V+A GV TP + +L G + QG LF+K ++G ++A ++K Sbjct: 520 IELAHDLGLSVTAEGVETPVQRRFLLDMGCQEAQGHLFSKP-VDGQMAVALLQEK 573 >UniRef50_A8IFX4 Sensory box/GGDEF family protein n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IFX4_AZOC5 Length = 833 Score = 80.9 bits (198), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 71/286 (24%), Positives = 132/286 (46%), Gaps = 21/286 (7%) Query: 113 GTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTIND 172 GTS +L + L +R Q+ FE E + L S + L+ S N Sbjct: 543 GTSVIEL-LKNADLALYRAKAEGRGQARLFEPEMEHTAL-----SRRSLELDLRSAWENG 596 Query: 173 HF--AFHPIVDPLSRRIIAFEAIVQ-----KNEDSPSAIAVGQRKDGEIYTADLKSKALA 225 F F P R++ FEA+++ + +P+ + G I L + L Sbjct: 597 QFFLVFQPFFRVGDRKLCGFEALLRWRHPTRGIVAPATFIACAEETGLILP--LGAWVLT 654 Query: 226 FTMAHALELGDKM-ISINLLPMTLVNE--PDAVSFLLNEIKANALVPEQIIVEFTESEVI 282 A + D + +++NL P+ + PD + ++ + L P ++ +E TES ++ Sbjct: 655 EACRAAADWPDDVRLAVNLSPLQFRSGHMPDQIR---EALRVSGLKPSRLELELTESTLL 711 Query: 283 SRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQ 342 A++ L++ GI++A+D FG G++ L L DRIKI + I+ + + P + Sbjct: 712 EEGSGIHGALQGLRSQGITIALDDFGTGYSSLSYLRSLPIDRIKIDRGFISRICEDDPSR 771 Query: 343 AIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 AI++A+++ +L+++ +A G+ T E+ L + G QG L + Sbjct: 772 AIVRAVLQLSAALKLETTAEGIETEEQLETLRAEGCGYVQGYLLGR 817 >UniRef50_Q2BBK9 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BBK9_9BACI Length = 249 Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 57/213 (26%), Positives = 106/213 (49%), Gaps = 6/213 (2%) Query: 175 AFHPIVDPLSRRIIAFEAIVQKNE-DSPSAIAVGQRKDGEIYTADLKSKALAFTM--AHA 231 AF PI I +E +++ E +P + +++G++Y D+ S A + + A Sbjct: 29 AFQPIFSLAEHCIAGYEGLIRSFEIQNPEVLFAMAKQNGKLYELDVFSIARSISTFEYQA 88 Query: 232 LELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALV-PEQIIVEFTESEVISRFDEFAE 290 +S+N+ P T++ EP A + +++I AL+ PEQI E E+E + + + Sbjct: 89 AAAASFRLSVNIFPSTML-EP-AFLWKIDDIMKKALLKPEQITFELNEAESVVSLNRLKD 146 Query: 291 AIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIK 350 ++ LK+ G +A+D G G + L + +PD +K+ + N+ +S +Q + I Sbjct: 147 IVQYLKSLGFRIALDDLGKGQSSLRIALELEPDIVKLDRYFCENLAESVKKQKFLDWIAA 206 Query: 351 CCTSLEIQVSAMGVATPEEWMWLESAGIEMFQG 383 S + V+ G+ T E+ M AGI++ QG Sbjct: 207 YFISEGVAVTLEGIETAEQLMIARQAGIQLGQG 239 >UniRef50_C5S5K8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S5K8_CHRVI Length = 1069 Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 47/155 (30%), Positives = 81/155 (52%), Gaps = 1/155 (0%) Query: 234 LGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIK 293 L D +++NL L PD V + ++ L E++ +E TES ++ + ++ E ++ Sbjct: 897 LTDLTVAVNLSGRQL-RSPDLVERVTRVLRETGLPAERLKLELTESMIMDQREQALERLR 955 Query: 294 SLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCT 353 +LKA G+ ++ID FG G++ L L R D +KI ++ + ++ + I II Sbjct: 956 ALKALGVRLSIDDFGTGYSSLAYLKRLPIDELKIDRDFVRDIPEDSSDMEIAATIIAMAR 1015 Query: 354 SLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 +L + V A GV TPE+ +L G QG LF + Sbjct: 1016 NLRLNVIAEGVETPEQCDFLIRQGCTAGQGYLFGR 1050 >UniRef50_C8Q5J3 BLUF domain protein n=1 Tax=Pantoea sp. At-9b RepID=C8Q5J3_9ENTR Length = 76 Score = 80.9 bits (198), Expect = 8e-14, Method: Composition-based stats. Identities = 38/64 (59%), Positives = 45/64 (70%) Query: 1 MLTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGPEEQVKM 60 MLTT+IYRSHI DD P++ + +MV A N VTGILLFNG+HFF +LEG EE V Sbjct: 1 MLTTVIYRSHIADDVPLRNLPDMVGKARAHNASHHVTGILLFNGTHFFHILEGLEEGVLT 60 Query: 61 IYRA 64 IY A Sbjct: 61 IYEA 64 >UniRef50_D1U8B8 Diguanylate phosphodiesterase n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U8B8_9DELT Length = 420 Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 65/233 (27%), Positives = 108/233 (46%), Gaps = 11/233 (4%) Query: 176 FHPIVDPLSRRIIAFEAIVQ-----KNEDSPSAIAVGQRKDGEIYTA-DLKSKALAFTMA 229 F P V + +I EA+ + E P ++ G D E A D + A Sbjct: 27 FQPQVSLKRKAVIGLEALSRGFDGASGEIIPPSVLFGLASDPETRLALDRVCRTRAAESF 86 Query: 230 HALELGDK--MISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDE 287 AL DK M+S+N+ + + + LL IK + P +I+E ES D Sbjct: 87 AALHRRDKSVMLSMNIDAACISEDTRGSNHLLKLIKRCDISPNNVIIEIIESRC-EDMDA 145 Query: 288 FAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQA 347 E ++ + +A+D GAGF+ L + +PD +K+ + LI+ V++ + + ++ Sbjct: 146 LLEFVRFYRKKNFLIALDDVGAGFSNLDRIPLLKPDVLKLDRSLISGVNEQFHKLEVARS 205 Query: 348 IIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK--LNGIPSIA 398 ++ L V A GV T EE M L + GI++FQG FA+ L+ +P +A Sbjct: 206 FVQMANRLGCLVLAEGVETSEETMCLLANGIDVFQGFFFARPAPGLDAVPGMA 258 >UniRef50_A6CJY1 Sensory box/GGDEF family protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CJY1_9BACI Length = 656 Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 67/243 (27%), Positives = 113/243 (46%), Gaps = 10/243 (4%) Query: 170 INDHFAFH--PIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQ-----RKDGEIYTADLKSK 222 +N F H P+V +++I FEA+++ N I+ G+ + G I Sbjct: 404 LNQEFEVHYQPMVSLKEKKVIGFEALLRWNHPEKGMISPGEFIHIAEETGLIVPIGEWVV 463 Query: 223 ALAFTMAHALE-LGDKMISINL-LPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESE 280 A H + DK SI++ L + ++ D L I+ + + P + +E TES Sbjct: 464 KEACQQVHEWNRMLDKSYSISINLSLKQFSKKDIYEVLTGIIEDSGMSPSLVTIEITESM 523 Query: 281 VISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGP 340 ++ + +K K G ++ID FG G++ L L F IKI + I +V+ SG Sbjct: 524 AMTNTEHTLLTLKKFKENGYGISIDDFGTGYSSLSYLKDFSIKTIKIDRSFIKSVNDSGK 583 Query: 341 RQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWP 400 AI++AI+ +L ++V A GV P + +L S QG ++K LN +++ Sbjct: 584 DDAIVKAILSIAGNLGLEVVAEGVELPHQEHFLLSQHCNYAQGYHYSKP-LNSRDLLSYL 642 Query: 401 EKK 403 EKK Sbjct: 643 EKK 645 >UniRef50_C5BN58 Predicted signal transduction protein, with PAS, HAMP, GGDEF and EAL domainsl n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BN58_TERTT Length = 807 Score = 80.5 bits (197), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 64/224 (28%), Positives = 103/224 (45%), Gaps = 15/224 (6%) Query: 177 HPIVDPLSRRIIAFEAIV-----QKNEDSPSAIAVGQRKDGEIYTADLKSKALAFTMAHA 231 PI D +R +I EA+V ++ SP + G IY DL S L A+ Sbjct: 565 QPIYDAATREMIKGEALVRWMDPEEGFISPEVFVSLAEESGLIY--DLGSLVLEKVCAYL 622 Query: 232 LE-------LGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISR 284 E LG + I++NL V+++ K + P+QI E TES V+ Sbjct: 623 HEHEGKLHLLGMRTIAVNLSARQFF-ASQLVTYIEATFKQYQIDPKQIEFELTESMVMDD 681 Query: 285 FDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAI 344 D+ + +++++ G S++ID FG G++ L L +F + +KI + I ++ + I Sbjct: 682 VDQAIDIMRAIRNLGCSLSIDDFGTGYSSLSYLKQFPINTLKIDRSFIKDIPEDKNDVEI 741 Query: 345 IQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 II +L + V A GV T E+W L + QG FA+ Sbjct: 742 AYTIIAMAHNLGLTVVAEGVETKEQWQLLRDKNCDYLQGYYFAR 785 >UniRef50_B3E3S5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=cellular organisms RepID=B3E3S5_GEOLS Length = 1036 Score = 80.5 bits (197), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 44/128 (34%), Positives = 68/128 (53%) Query: 261 EIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRF 320 +++ L P+ + E TES ++ +E E I LK G+ +AID FG G++ L L Sbjct: 521 QLQMVGLPPDALCCELTESLLMEHSNENTEQIFRLKELGVKLAIDDFGTGYSSLTYLKHL 580 Query: 321 QPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEM 380 DRIKI + + + + +AI+ AII SL ++V+A GV TP + L+ G + Sbjct: 581 PVDRIKIDRSFVNELDSNPDDRAIVVAIIAMARSLHLKVTAEGVETPSQHQLLQELGCDT 640 Query: 381 FQGDLFAK 388 QG F K Sbjct: 641 MQGYYFGK 648 >UniRef50_Q1YLJ5 Possible signaling protein with EAL domain n=2 Tax=Aurantimonadaceae RepID=Q1YLJ5_MOBAS Length = 828 Score = 80.5 bits (197), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 61/221 (27%), Positives = 108/221 (48%), Gaps = 10/221 (4%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTMAH 230 + P VD R I FEA+++ N SPS + G I L + A A Sbjct: 574 YQPFVDTGRRAISGFEALLRWNHPERGRVSPSTFIPLAEETGMITPIGLWALETACEQAS 633 Query: 231 ALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAE 290 + D IS+NL + P V+ + + + L P ++ +E TES + D+ Sbjct: 634 NW-VSDLAISVNLSAVQF-KSPTLVADVRRVLAKSGLQPSRLQIEVTESLFLDEGDKVLS 691 Query: 291 AIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQ-AIIQAII 349 + + G+++++D FG G++ L L+RF D+IKI Q + ++ + P AI++++I Sbjct: 692 ILTEFRRMGLTISMDDFGTGYSSLGYLNRFPFDKIKIDQSFVRDMSR--PENIAIVRSVI 749 Query: 350 KCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 +L+++V A G+ TPE+ L + G QG F++ + Sbjct: 750 GLSNALDMRVIAEGIETPEQMRILYAEGCREMQGYYFSRPR 790 >UniRef50_A8VRD8 Putative diguanylate phosphodiesterase n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VRD8_9BACI Length = 778 Score = 80.5 bits (197), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 49/150 (32%), Positives = 81/150 (54%), Gaps = 1/150 (0%) Query: 239 ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAA 298 ISIN+ + +P+ + + I+ + L P+ I +E TE+ +S D+ E + +LK Sbjct: 616 ISINISVIQF-EQPNFIRSVKKAIEDSGLDPKWIQLEITETTAMSLGDDKIEKMAALKGL 674 Query: 299 GISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQ 358 G+S+AID FG G++ L ++F +KI + I+ + K + I +A+I +L IQ Sbjct: 675 GVSIAIDDFGTGYSSLAYFTQFPITTLKIDRTFISRLGKDPKAEMITEAVISMAETLRIQ 734 Query: 359 VSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 A GV T E+ +L+ G QG FAK Sbjct: 735 TVAEGVETAEQAAFLKELGCTYIQGFYFAK 764 >UniRef50_A4U4R0 Sensory box/GGDEF family protein n=3 Tax=Magnetospirillum RepID=A4U4R0_9PROT Length = 840 Score = 80.5 bits (197), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 42/151 (27%), Positives = 81/151 (53%) Query: 239 ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAA 298 I++NL P+ N ++ + + + P+Q+ +E TE + + + ++ L+ Sbjct: 672 IAVNLSPVQFKNHTALLAMIADILDQTGFPPDQLQLEITEGIAMQNVEATVDVLRQLRDM 731 Query: 299 GISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQ 358 G+ ++ID FG G++ L L RF D++KI + + ++ A++ AI+ SL + Sbjct: 732 GVLISIDDFGTGYSSLNYLKRFPVDKLKIDRSFVVDIGLHPDNAAVVNAIVTLGHSLGTR 791 Query: 359 VSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 V+ GV T E+ +L++ G++ QG FAKA Sbjct: 792 VNVEGVETIEQLDFLKAHGVDEAQGFYFAKA 822 >UniRef50_A5FVT2 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FVT2_ACICJ Length = 742 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 1/160 (0%) Query: 231 ALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAE 290 A+ ++ I++N L N P + ++ L P+++ +E TE+ + AE Sbjct: 557 AVNWPNRTIAVNASGPELAN-PGYAERVAAILRVTGLPPQRLEIEITETAANGQIGTAAE 615 Query: 291 AIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIK 350 + SL+A G+ +AID FG GF+ L L + + DR+KI + I + I++AII+ Sbjct: 616 NLASLRAMGVRIAIDDFGTGFSSLARLQQLRVDRVKIDRSFIHGFGDQDSDEVIVRAIIE 675 Query: 351 CCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 + ++V+A GV T E+ L G + QG +F+KA+ Sbjct: 676 LAHARGLRVTAEGVETLEQREGLARIGCDDLQGFIFSKAR 715 >UniRef50_A1K5F7 EAL/GGDEF-domain containing signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5F7_AZOSB Length = 576 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 44/150 (29%), Positives = 78/150 (52%), Gaps = 1/150 (0%) Query: 239 ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAA 298 +S+N+ + +P + + ++ + P + +E TES ++S + A ++SLK Sbjct: 414 VSVNVSAVQF-GQPRLLETVREALRGSGFPPACLTLEITESSLMSDVESAAGMLRSLKNM 472 Query: 299 GISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQ 358 G+ +A+D FG G++ L L R D +KI + + +V +G AI++AII SL + Sbjct: 473 GVRIAVDDFGTGYSSLSYLRRLPIDTVKIDKSFVRDVSNNGEDAAIVRAIIALAHSLGLG 532 Query: 359 VSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 A GV T E+ L G + FQG + + Sbjct: 533 TVAEGVETAEQEATLRREGCDSFQGYRYGR 562 >UniRef50_A9C2Q1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Delftia acidovorans SPH-1 RepID=A9C2Q1_DELAS Length = 765 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 60/220 (27%), Positives = 105/220 (47%), Gaps = 7/220 (3%) Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVG-----QRKDGEIYTADLKSKALAFTM 228 A+ PI + +I FE++++ N + ++ G + G + D + + Sbjct: 522 MAYQPICHVATGKISGFESLMRWNSPARGSVPPGVFIPMAERRGLLLPIDQMVERSPLLV 581 Query: 229 AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEF 288 A+ D +SIN P +P L + + L PE+ +E TES ++ ++ Sbjct: 582 ANGWP-SDISVSINC-PAFEFLDPGMAVQLKDHLDRAGLNPERCYIEVTESALLQDDEQV 639 Query: 289 AEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAI 348 ++ +KA G+++AID FG+G A L L RF + IKI + I + K AI++A Sbjct: 640 LSVMRQVKALGVNLAIDDFGSGHASLSYLHRFPFNLIKIDRSFIQAMDKDAGAAAIVEAT 699 Query: 349 IKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 + L ++V A GV T E+++ L+ G QG L A+ Sbjct: 700 LALSRRLGLEVVAEGVETTEQFLHLQQLGCTYVQGFLIAR 739 >UniRef50_C8WTE1 Diguanylate phosphodiesterase n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WTE1_ALIAD Length = 340 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 57/234 (24%), Positives = 105/234 (44%), Gaps = 9/234 (3%) Query: 173 HFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFT 227 A PIVD ++A E +V+ SP A+ R+ ++ D + A Sbjct: 105 QMAMQPIVDLTKGSVVACEMLVRATAPDGSFVSPHALFEAAREQSRLFALDRACRIEAIA 164 Query: 228 MAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDE 287 A L D + +N +P + + + +A+ P +++ E E+E + Sbjct: 165 AARRLP-ADWDVFVNFIPTAIYVPEHCLQSTFAAAERHAVHPSRLVFEVVETERVDDVAH 223 Query: 288 FAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQA 347 + +A G+ A+D FG G++ +L PD +K+ ++ + +V + ++ + + Sbjct: 224 LRAILAFYRAKGVRYALDDFGEGYSDENMLRAISPDVVKLDRQFVDHVDRDPAKRRVAEG 283 Query: 348 IIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIP--SIAW 399 + + SL+I++ A GV PEE L G QG L+A+ L +P SIAW Sbjct: 284 LARVAQSLDIRLLAEGVERPEEATALLELGYTWQQGYLYARPSLE-VPDGSIAW 336 >UniRef50_Q7NPW3 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NPW3_CHRVO Length = 946 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 47/150 (31%), Positives = 80/150 (53%), Gaps = 6/150 (4%) Query: 250 NEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGA 309 +PD V ++ I L P + +E TES +I + + A A+++L G+ +A+D FG Sbjct: 785 RDPDLVGWIGERIAHYRLPPAMLHLEITESALIDQPEAAATAMQALHGLGVRLALDDFGT 844 Query: 310 GFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEE 369 G++ L L R++ D +KI Q + ++ + AI++AI+ +L+++V A GV T + Sbjct: 845 GYSALSYLHRYRFDVLKIDQSFVFDLDRKQESVAIVRAILALARALDLEVVAEGVETASQ 904 Query: 370 WMWLESAGIEMFQGDLFAKAKLNGIPSIAW 399 L+ G M QG FA P+ AW Sbjct: 905 SAMLKEMGCGMLQGFHFAA------PAPAW 928 >UniRef50_Q2W7U0 Predicted signal transduction protein containing a membrane domain n=3 Tax=Magnetospirillum RepID=Q2W7U0_MAGSA Length = 831 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 59/226 (26%), Positives = 110/226 (48%), Gaps = 15/226 (6%) Query: 173 HFAFHPIVDPLSRRIIAFEA----------IVQKNEDSPSAIAVGQ-RKDGEIYTADLKS 221 H F P+VD S ++ A EA +V ++ P A +G R GE Sbjct: 346 HLVFQPLVDVKSGKVNAAEALLRWHNRYLGVVSPDQFVPLAEEIGLIRPIGEWLLTAACR 405 Query: 222 KALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEV 281 +AL + + LG+ I++N+ P + D V + ++ L P + +E TE + Sbjct: 406 EALVW---QGMGLGEINIAVNISPRQF-QQGDIVGIIRRALEDTRLPPWLLTIEITEGLL 461 Query: 282 ISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPR 341 +S +E +++++ G+S+++D FG G++ L L F D +KI + I ++ Sbjct: 462 LSNGEEILAKMEAIRTLGVSLSVDDFGTGYSSLSYLKSFPVDVLKIDRSFIADMGDHSDD 521 Query: 342 QAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFA 387 +++AII SL ++V A GV T ++ ++ + G ++ QG F+ Sbjct: 522 ATMVEAIIALGHSLHLEVVAEGVETKQQLDFITAQGCDVAQGYYFS 567 >UniRef50_Q12T53 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=2 Tax=Shewanella RepID=Q12T53_SHEDO Length = 941 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 51/159 (32%), Positives = 84/159 (52%), Gaps = 1/159 (0%) Query: 230 HALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFA 289 H L K +S+NL + L+N + ++N I+ P + +E TE+ +++ ++ Sbjct: 756 HQLGFDFKRVSVNLSALDLIN-INLAEEIINLIEEAGAEPRWLKIEITETALMAAPEQSI 814 Query: 290 EAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAII 349 ++ L GI VAID FG G++ L L +KI Q I N+ S QA+++A+I Sbjct: 815 STLQQLVGNGIHVAIDDFGTGYSSLAYLKSLPATSLKIDQSFIRNIMTSIEDQAVVKAVI 874 Query: 350 KCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 SL +V+A GV T E+ +L + ++ QG LFAK Sbjct: 875 SMAHSLGKKVTAEGVETQEQLDFLITRHCDLAQGYLFAK 913 >UniRef50_B0C4N3 Diguanylate cyclase/phosphodiesterase with EAL domain n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C4N3_ACAM1 Length = 585 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 48/136 (35%), Positives = 74/136 (54%), Gaps = 3/136 (2%) Query: 253 DAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFA 312 D++ +L E + L P + +E TE+ V + + A ++ +K GI +++D FG G+A Sbjct: 429 DSIRGILAETQ---LDPRGLKLEITETMVFNNLEYAAAMLRQIKGLGIQLSMDDFGTGYA 485 Query: 313 GLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMW 372 L L + D +KI + + + SG IIQA+I+ SL I V A GV T E+ Sbjct: 486 SLSYLHQLPVDNLKIDRSFVETIDTSGTESEIIQAVIQLAHSLNIDVVAEGVETVEQANR 545 Query: 373 LESAGIEMFQGDLFAK 388 L++ G E QG LFAK Sbjct: 546 LKNLGCEYAQGYLFAK 561 >UniRef50_C6RJR5 Two-component response regulator n=4 Tax=Acinetobacter radioresistens RepID=C6RJR5_ACIRA Length = 855 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 63/261 (24%), Positives = 118/261 (45%), Gaps = 19/261 (7%) Query: 146 AEDSWLFIADGSDK---ELDSCALS----PTINDH---FAFHPIVDPLSRRIIAFEAIVQ 195 ++W + + + K E+D L +ND+ + P+++P + EA+++ Sbjct: 580 GRNTWHWYEEANKKVMPEIDYAHLRLELMEALNDNQFNLFYQPLINPATGLAKGVEALIR 639 Query: 196 KNEDS-----PSAIAVGQRKDGEIYTAD---LKSKALAFTMAHALELGDKMISINLLPMT 247 N P + G+I LK + + +S+N+ P+ Sbjct: 640 WNHPQRGYIFPDIFIPLAERTGQIVAIGQWVLKKACMDIAEWNKTHQSQLTVSVNISPLQ 699 Query: 248 LVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHF 307 + L + + + L PE + +E TE VI D E +KS++ G+ V+ID F Sbjct: 700 F-RRAGFLQELEHALDISTLTPELLKIEVTEGMVIIGADRAIEILKSIRELGVQVSIDDF 758 Query: 308 GAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATP 367 G G++ L L R ++IK+ + I ++ +S AI+Q+II L ++V A GV T Sbjct: 759 GTGYSSLSYLRRLPINQIKLDRSFIEHLTESDQDAAIVQSIIHLAHQLNLEVVAEGVETL 818 Query: 368 EEWMWLESAGIEMFQGDLFAK 388 ++ +L G ++ QG +A+ Sbjct: 819 KQAAFLYQQGCDLLQGYFYAR 839 >UniRef50_C7LPE1 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LPE1_DESBD Length = 701 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 46/153 (30%), Positives = 84/153 (54%), Gaps = 2/153 (1%) Query: 239 ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAA 298 +S+NL ++PD V L + I+ N + P Q+ +E TES+V++ + + ++ +K Sbjct: 537 VSVNLSARQF-SDPDLVHNLFSCIRHNRINPTQLKLEITESDVMTNPEATIQKLRIMKEL 595 Query: 299 GISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQ 358 G+++ +D FG G++ + L RF D +KI + +T + K R I++ II +L + Sbjct: 596 GLAILVDDFGTGYSSMSYLQRFPIDTLKIDRSFVTQLDKHANR-VIVRTIINLAHNLGLS 654 Query: 359 VSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 V A G+ T + + L+ G E QG F++ L Sbjct: 655 VVAEGIETEAQCLTLQEMGCEYAQGFHFSRPIL 687 >UniRef50_B8GL67 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GL67_THISH Length = 685 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 50/155 (32%), Positives = 80/155 (51%), Gaps = 1/155 (0%) Query: 236 DKMISINLLPMTLVNE-PDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKS 294 D +S+N+ P+ +E + V L ++ + EQI++E TE+ ++ DE + Sbjct: 511 DIQVSVNMSPLQFRSEGAERVESWLYHLEEMGVRGEQIVIEITENLLLHAHDEVTRQLFR 570 Query: 295 LKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTS 354 + AGI +AID FG G+ L L +F D +KI + + N+ A+ +AII Sbjct: 571 FRDAGIQIAIDDFGTGYCTLSYLKQFPIDYLKIDRSFVRNLENDPNDVALSKAIIVMAHE 630 Query: 355 LEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 L ++V A GV T + L AG + QG LFA+A Sbjct: 631 LGLKVIAEGVETEGQRRLLSDAGCDFAQGYLFARA 665 >UniRef50_Q3JCS1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Nitrosococcus oceani RepID=Q3JCS1_NITOC Length = 571 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 1/157 (0%) Query: 232 LELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEA 291 L G +++NL P +PD + ++ L P + +E TE ++ D Sbjct: 396 LRAGPLRVAVNLSPRQF-RQPDLAGSIATILEKTGLAPSALEIEVTEGLLLEDMDSAFNT 454 Query: 292 IKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKC 351 ++SL G+ V++D FG G A L L D IKI + I + + I +A+I Sbjct: 455 LQSLSILGVHVSVDDFGTGHASLSYLKNLPFDSIKIDRSFIHGIPADSESRTITKAVIAL 514 Query: 352 CTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 SL ++V A GV TPE+ ++L+ G ++ QG +K Sbjct: 515 GHSLNLKVVAEGVETPEQLLYLQKQGCDLVQGYFISK 551 >UniRef50_D2SEK4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SEK4_9ACTO Length = 878 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 62/225 (27%), Positives = 109/225 (48%), Gaps = 18/225 (8%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNE----DSPSA--IAVGQRKD--GEIYTADLKSKALAF- 226 F P+V RR+ EA+++ + P A + + +R GE+ L A A Sbjct: 634 FQPVVSLGERRVTGVEALLRWQHPELGEVPPAEFVPIAERAGVIGELQRWALTHAAAAVL 693 Query: 227 ---TMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVIS 283 L LG + + ++ TLV + AV +++ L PE++I+E TE+ ++S Sbjct: 694 TLPCTGAPLRLGVNISASHVAARTLVRDVAAV------LQSTGLAPERLILEITEATLMS 747 Query: 284 RFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQA 343 + A I++L+ G+ VA+D FG G + L L+R D +K+ + V + +A Sbjct: 748 EGEHVAVDIEALRLMGVHVALDDFGTGRSSLAHLTRLPIDVLKLDHAFVLRVDRDPKARA 807 Query: 344 IIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 + ++++ +L + V A GV TP + L +AG QG L A+ Sbjct: 808 LCESVVSIAGALGLDVVAEGVETPAQLGALRAAGCGFAQGFLLAR 852 >UniRef50_Q2BKT3 Probable signalling protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BKT3_9GAMM Length = 825 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 54/150 (36%), Positives = 84/150 (56%), Gaps = 1/150 (0%) Query: 239 ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAA 298 I++NL + + N PD V+ + + ++ L PE + +E TES +I F+ + ++ LK Sbjct: 650 IAVNLSSLQVAN-PDLVATIESTLERARLAPELLELELTESILIEDFEATIKILQQLKDL 708 Query: 299 GISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQ 358 G+ +A+D FG G++ L L +F DRIKI Q + ++ +S I QAII SL +Q Sbjct: 709 GVKIAVDDFGTGYSSLSYLKQFPIDRIKIDQSFVRDIDQSSKSAEITQAIIAMAHSLNMQ 768 Query: 359 VSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 V A GV T + +L S E QG F+K Sbjct: 769 VIAEGVETDHQRGFLMSQTCEELQGFFFSK 798 >UniRef50_C8WGK9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Bacteria RepID=C8WGK9_EGGLE Length = 559 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 43/146 (29%), Positives = 80/146 (54%), Gaps = 1/146 (0%) Query: 238 MISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKA 297 ++ +N+ + L++ D V F+ ++ + P I++E TES ++ D L++ Sbjct: 392 IMDVNISYLQLLD-ADFVPFVEQLVERTGVDPASIVLEMTESYFVTDMDALRATFDRLRS 450 Query: 298 AGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEI 357 GI +A+D FG G++ L LL++ D +KI + I ++H+ +A I A+I+ C S+ I Sbjct: 451 IGIRIAMDDFGTGYSSLGLLAQSPADIVKIDRLFIKDIHREAFNRAFIDAVIELCHSVGI 510 Query: 358 QVSAMGVATPEEWMWLESAGIEMFQG 383 +V+ GV P E + + G + QG Sbjct: 511 EVTVEGVEEPTELDAVRAIGADSIQG 536 >UniRef50_Q46V22 Diguanylate cyclase/phosphodiesterase n=5 Tax=cellular organisms RepID=Q46V22_RALEJ Length = 442 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 52/175 (29%), Positives = 94/175 (53%), Gaps = 6/175 (3%) Query: 214 IYTADLKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQII 273 + TA +++A + T+ A ++INL L E V+ + + +++ L P + Sbjct: 257 LQTACAQARAWSLTLPQA-----PRVAINLFAAQLA-ESRLVTEVRHVLRSLELPPAGLE 310 Query: 274 VEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELIT 333 +E TE+ + + DE ++ +++L+ G+++ D FG G+A L L F DR+KI Q + Sbjct: 311 IEITETIALQQGDEVSDQLQALRRDGVTLTCDDFGTGYASLSFLKSFPVDRLKIDQSFVR 370 Query: 334 NVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 NV + AI++++I SL+I V A GV T E+ +L + G QG L+ + Sbjct: 371 NVTQDPVDAAIVRSVINVGQSLQIGVVAEGVETVEQRDFLLANGCWEAQGYLYGR 425 >UniRef50_C6DZH0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Geobacter RepID=C6DZH0_GEOSM Length = 853 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 40/145 (27%), Positives = 76/145 (52%) Query: 244 LPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVA 303 L + PD + + + PE + +E TE+ ++S ++ ++KA G+ ++ Sbjct: 679 LSASFFQHPDFEETIEESLLQTGIAPECLELELTEATIMSDPQRVLGSMAAMKALGLQLS 738 Query: 304 IDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMG 363 ID FG G++ L L + D++KI Q I N+ + A+++A+I S++++V A G Sbjct: 739 IDDFGTGYSSLSYLKKLPVDKLKIDQSFIHNIARDADNAAVVRAVISIGRSMQLRVIAEG 798 Query: 364 VATPEEWMWLESAGIEMFQGDLFAK 388 V + WL++ G E QG F++ Sbjct: 799 VENASQLAWLQAEGSEEAQGYYFSR 823 >UniRef50_Q2SFK1 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFK1_HAHCH Length = 1092 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 8/219 (3%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDS----PSAIAVGQRKDGEIYTAD---LKSKALAFTM 228 + P +DP + EA+V+ + P + G I D L++ L M Sbjct: 704 YQPQLDPHGGGAVGLEALVRWRKGDRMVPPLEFIPIAEETGLITEVDAWVLRAACLQLKM 763 Query: 229 AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEF 288 + +S+NL P + V + ++ + + P + +E TES V+ +E Sbjct: 764 WRDQKQQMVPVSVNLSPRQF-QDAYCVELVRKVLQESNIEPGCLKIEVTESMVMHNAEEA 822 Query: 289 AEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAI 348 + LKA G+ +++D FG G++ L L F D++KI + + NV AII+AI Sbjct: 823 LRTMTQLKAMGVQLSMDDFGTGYSSLSYLKMFPFDQLKIDKSFVRNVTNDPQEAAIIRAI 882 Query: 349 IKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFA 387 I +L I++ A GV T E++ +L AG ++ QG ++ Sbjct: 883 IGLGKTLGIKIVAEGVETVEQYSFLVRAGCDLIQGYFYS 921 >UniRef50_Q2I6K9 Multidomain signal-transduction protein n=1 Tax=uncultured delta proteobacterium DeepAnt-32C6 RepID=Q2I6K9_9DELT Length = 955 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 97/204 (47%), Gaps = 15/204 (7%) Query: 173 HFAFHPIVDPLSRRIIAFEAIVQ-----KNEDSPSA-IAVGQRKDGEIYTADL----KSK 222 H FHPIVD S I FEA+V+ + + SP I V + I L + Sbjct: 693 HLVFHPIVDVESCEIAGFEALVRWMHHDRGQVSPEDFIGVCEETGLIIPLGKLVIEGACE 752 Query: 223 ALAFTMAHALELGDKMISINLLPMTLVNEP--DAVSFLLNEIKANALVPEQIIVEFTESE 280 A+A EL ISIN+ P L E D V L K L P+ + +E TES Sbjct: 753 AIAEWRQRHPELSPPTISINVSPRQLSAEGLVDDVRHALERWK---LAPQLLTLEITESA 809 Query: 281 VISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGP 340 ++ D + +K LK G+ + ID FG G++ L LS+ D +KI + + ++ Sbjct: 810 LLDDIDSSIQVLKDLKDLGVGLQIDDFGTGYSSLSYLSQLPIDALKIDRSFLRDMTSDTN 869 Query: 341 RQAIIQAIIKCCTSLEIQVSAMGV 364 + I+ AII SL+++V+A GV Sbjct: 870 QFNIVSAIITLAHSLDLEVTAEGV 893 >UniRef50_A8IKF7 Putative cylclic diguanylate phosphodiesterase n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IKF7_AZOC5 Length = 448 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 64/223 (28%), Positives = 111/223 (49%), Gaps = 11/223 (4%) Query: 176 FHPIVDPLSRRIIAFEAIVQK-NEDS---PSA--IAVGQRKDGEIYTADLKSKALAFTMA 229 + P VDP SRRI+ EA+++ N D P A I + + + D + +A Sbjct: 209 YQPQVDP-SRRILGAEALLRWFNPDHGIIPPAKFITLAEETGLIVPLGDWVLRTACAQLA 267 Query: 230 HALELG---DKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFD 286 E+ D IS+N+ + +PD V + + P ++ +E TES + D Sbjct: 268 LWAEIPATRDLTISVNV-SASQFRQPDFVPRVREILAHTGADPSRLKLELTESLFVRDPD 326 Query: 287 EFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQ 346 AE + +L+ G+ ++D FG G++ L +L D IKI + ++ + +AI++ Sbjct: 327 VAAEKMSALRDVGLRWSLDDFGTGYSSLHMLRNLPVDEIKIDKTFVSRMASEEQDRAIVR 386 Query: 347 AIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 +I C++L + + A GV T E++ L++ G + FQG LF KA Sbjct: 387 LLIDMCSTLGLFLVAEGVETEEQYRLLQAWGCDGFQGYLFGKA 429 >UniRef50_B8K4T2 Sensory box protein/ggdef domain/eal domain n=2 Tax=Vibrio RepID=B8K4T2_VIBPA Length = 532 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 62/222 (27%), Positives = 111/222 (50%), Gaps = 10/222 (4%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQ-----RKDGEI--YTADLKSKALAFTM 228 PIVD SR+++ EA+V+ N I+ Q K G I T + F Sbjct: 281 LQPIVDIHSRKVVGSEALVRWNHPVQGQISPEQFIPLAEKLGIIDRVTEYAFREVTRFLK 340 Query: 229 AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVIS--RFD 286 + ISIN+ +V +P+ V +L N K + + +I++E TE+ ++ + D Sbjct: 341 RNPDYCEHNYISINISRYQIV-KPEFVEYLTNYAKRHPKLVSRILLELTENVDLTSEQLD 399 Query: 287 EFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQ 346 + +++ G +AID FG G++GL L+ + + D +KI Q I ++H + +++ Sbjct: 400 LALTHLTQIQSLGFEIAIDDFGTGYSGLNLIRQMKFDVVKIDQVFIKSLHSDSNIKPVLK 459 Query: 347 AIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 ++I+ T L ++V A GV T + LE G++ QG +A+ Sbjct: 460 SMIQLATDLGMRVIAEGVETEYQIEQLEQLGVKYIQGFYYAR 501 >UniRef50_B6BLQ9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BLQ9_9PROT Length = 780 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 63/220 (28%), Positives = 103/220 (46%), Gaps = 14/220 (6%) Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDSPSAIA----VGQRKDGEIY---TADLKSKALAFTM 228 F PI + +++I FEA+V+ + I+ + K ++Y T + KA+ Sbjct: 555 FQPIYNQHNKKIEKFEALVRMIDTDDKVISPFFFLEIAKKAKLYSKITMIMIDKAIEAAK 614 Query: 229 AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEF 288 +H E SINL +VN+ D ++ L IK N + +I++E ESE I FDEF Sbjct: 615 SHDYEF-----SINLTIDDVVNK-DVATYFLENIKTNN-IGHKIVIELVESEGIENFDEF 667 Query: 289 AEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAI 348 I+ K G +AID FG G++ L + D IKI L+ ++ K + + + I Sbjct: 668 YSFIEQAKQLGCKLAIDDFGTGYSNFEYLLKLDVDYIKIDGSLVKDIDKDKNMRLVAENI 727 Query: 349 IKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 I +Q A V+ E + + G++ QG F + Sbjct: 728 ISFAKIANMQTIAEFVSHKEIADIVSAIGVDYSQGYYFGE 767 >UniRef50_C6E7Z7 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=3 Tax=Geobacter RepID=C6E7Z7_GEOSM Length = 721 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 50/156 (32%), Positives = 84/156 (53%), Gaps = 3/156 (1%) Query: 234 LGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAI- 292 LG +++NL P + D + + + A L P + +E TES ++ DE+ A+ Sbjct: 530 LGSVRVAVNLSPYHFQRQ-DVKEAIFSVLDATGLEPALLEIEITESALMQN-DEYTCALF 587 Query: 293 KSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCC 352 + L+ G+++++D FG G++ L L RF + +KI + I N+ KS QAI+ AII Sbjct: 588 RELRELGMTISVDDFGTGYSSLSYLHRFPINTLKIDRTFILNMMKSSEDQAIVTAIIAMA 647 Query: 353 TSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 SL +Q+ A GV T ++ L+ G QG L ++ Sbjct: 648 KSLNMQIVAEGVETVDQLEKLKDQGCHEIQGFLVSR 683 >UniRef50_C0QHY0 Signal transduction family protein (GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QHY0_DESAH Length = 559 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 47/171 (27%), Positives = 90/171 (52%), Gaps = 9/171 (5%) Query: 226 FTMAHALELGDKM--------ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFT 277 + + HAL G+K I+INL P T + +P+ + ++ + + P + +E T Sbjct: 376 WVLNHALSQGEKWHQQNFKLSIAINLSPATFL-DPELPNLIIGMLSLYDIPPNFVTLEIT 434 Query: 278 ESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHK 337 E +I D E ++ L + GI ++ID FG G++ L+ L + +KI + +T++ K Sbjct: 435 EGSMIKNPDLAMEILERLTSKGIKISIDDFGTGYSSLVYLKKMPASEVKIDKSFVTDMLK 494 Query: 338 SGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 + I+++II +L ++V A GV + +L++ G ++ QG F+K Sbjct: 495 NDNDAVIVKSIIDLGHNLGLKVVAEGVEDKQTANYLKTLGCDLLQGYYFSK 545 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P75990 Uncharacterized protein ycgF n=51 Tax=Enterobact... 543 e-153 UniRef50_A4WAH8 Diguanylate phosphodiesterase n=4 Tax=Enterobact... 463 e-129 UniRef50_B5XQZ5 BLUF domain/cyclic diguanylate phosphodiesterase... 461 e-128 UniRef50_C9Y9E1 Putative uncharacterized protein n=1 Tax=Curviba... 432 e-119 UniRef50_B4S2Z3 Putative uncharacterized protein n=2 Tax=Alterom... 389 e-106 UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteo... 316 9e-85 UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/P... 314 4e-84 UniRef50_Q3A2X0 Motility repressor MorA n=1 Tax=Pelobacter carbi... 312 2e-83 UniRef50_B7KTV8 Diguanylate cyclase/phosphodiesterase with PAS/P... 312 2e-83 UniRef50_A4U4R0 Sensory box/GGDEF family protein n=3 Tax=Magneto... 310 6e-83 UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/P... 310 8e-83 UniRef50_C1DB08 Predicted signal transduction protein containing... 308 2e-82 UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Ta... 307 5e-82 UniRef50_B6QZR2 Sensory box/ggdef family protein n=1 Tax=Pseudov... 307 5e-82 UniRef50_A8IFX4 Sensory box/GGDEF family protein n=1 Tax=Azorhiz... 306 9e-82 UniRef50_B9R1X0 Cyclic diguanylate phosphodiesterase domain prot... 306 1e-81 UniRef50_C1D1W4 Putative diguanylate-cyclase n=1 Tax=Deinococcus... 306 1e-81 UniRef50_B1ZFY0 Diguanylate cyclase/phosphodiesterase with PAS/P... 305 2e-81 UniRef50_B1M3H8 Diguanylate cyclase/phosphodiesterase with PAS/P... 304 3e-81 UniRef50_C5SFB8 Diguanylate cyclase/phosphodiesterase n=1 Tax=As... 303 6e-81 UniRef50_Q3A1F4 Response regulator receiver modulated diguanylat... 303 1e-80 UniRef50_B9QZL6 Cyclic diguanylate phosphodiesterase domain prot... 302 2e-80 UniRef50_C4ZM39 Diguanylate cyclase/phosphodiesterase with PAS/P... 302 2e-80 UniRef50_C7CCD7 Putative diguanylate cyclase (GGDEF) /phosphodie... 302 2e-80 UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/P... 302 2e-80 UniRef50_Q07VI3 Diguanylate cyclase/phosphodiesterase with PAS/P... 301 3e-80 UniRef50_Q1YLJ5 Possible signaling protein with EAL domain n=2 T... 301 3e-80 UniRef50_B0CAC5 Diguanylate cyclase/phosphodiesterase n=7 Tax=ce... 301 4e-80 UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/P... 300 6e-80 UniRef50_Q2J3Q8 Diguanylate cyclase/phosphodiesterase with GAF s... 300 7e-80 UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 300 7e-80 UniRef50_C3KBD8 Putative sensory box GGDEF/EAL domain protein n=... 300 9e-80 UniRef50_B1M4V3 Diguanylate cyclase/phosphodiesterase with PAS/P... 299 9e-80 UniRef50_Q3JCS1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ni... 299 1e-79 UniRef50_A1TLA7 Diguanylate cyclase/phosphodiesterase with PAS/P... 298 2e-79 UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/P... 298 2e-79 UniRef50_C8QI00 Diguanylate cyclase/phosphodiesterase with PAS/P... 298 2e-79 UniRef50_A4BJS0 Predicted signal transduction protein containing... 298 3e-79 UniRef50_A4U1P1 Sensory box/GGDEF family protein n=1 Tax=Magneto... 297 5e-79 UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 297 5e-79 UniRef50_B6JGP3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ol... 297 7e-79 UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/P... 296 9e-79 UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibac... 296 9e-79 UniRef50_Q2SPM3 Predicted signal transduction protein containing... 296 1e-78 UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/P... 296 1e-78 UniRef50_C7LQR9 Diguanylate cyclase/phosphodiesterase with PAS/P... 295 2e-78 UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ac... 295 2e-78 UniRef50_Q2SFK1 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC ... 295 2e-78 UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/P... 295 2e-78 UniRef50_Q0G5H0 GGDEF family protein n=1 Tax=Fulvimarina pelagi ... 294 3e-78 UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 294 3e-78 UniRef50_Q3MFD3 Diguanylate cyclase/phosphodiesterase n=4 Tax=No... 294 3e-78 UniRef50_Q98BI1 Mll5564 protein n=2 Tax=Mesorhizobium RepID=Q98B... 294 4e-78 UniRef50_C6XPY9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Hi... 294 4e-78 UniRef50_C5S5K8 Response regulator receiver modulated diguanylat... 294 4e-78 UniRef50_Q2IV14 Diguanylate cyclase/phosphodiesterase n=4 Tax=Rh... 294 4e-78 UniRef50_B1XXA0 Diguanylate cyclase/phosphodiesterase with PAS/P... 294 5e-78 UniRef50_D1C8G6 Diguanylate cyclase/phosphodiesterase with PAS/P... 293 5e-78 UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromob... 293 6e-78 UniRef50_B2UJ08 Diguanylate cyclase/phosphodiesterase n=5 Tax=Ra... 293 8e-78 UniRef50_Q9ABX9 Uncharacterized signaling protein CC_0091 n=3 Ta... 293 9e-78 UniRef50_A0NRC3 Sensory box/GGDEF family protein n=1 Tax=Labrenz... 293 1e-77 UniRef50_A1TM11 Diguanylate phosphodiesterase n=82 Tax=Bacteria ... 292 1e-77 UniRef50_B1LTA1 Diguanylate cyclase/phosphodiesterase with PAS/P... 292 1e-77 UniRef50_A0YBW6 Predicted signal transduction protein containing... 292 1e-77 UniRef50_A6X5M4 Diguanylate cyclase/phosphodiesterase n=2 Tax=Rh... 292 2e-77 UniRef50_B0UAD7 Diguanylate cyclase/phosphodiesterase with PAS/P... 292 2e-77 UniRef50_B5E7Y8 Response regulator receiver modulated diguanylat... 292 2e-77 UniRef50_A1K5F7 EAL/GGDEF-domain containing signaling protein n=... 291 3e-77 UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 291 3e-77 UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/P... 291 3e-77 UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Ma... 290 5e-77 UniRef50_A8FYM5 Signal transduction protein containing a membran... 290 5e-77 UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsul... 290 6e-77 UniRef50_C5SH16 Diguanylate cyclase/phosphodiesterase with PAS/P... 290 7e-77 UniRef50_A5VDE7 Diguanylate cyclase/phosphodiesterase with PAS/P... 290 7e-77 UniRef50_B8GSM4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 290 8e-77 UniRef50_Q2W7U0 Predicted signal transduction protein containing... 289 9e-77 UniRef50_A6LW88 Diguanylate cyclase/phosphodiesterase with PAS/P... 289 9e-77 UniRef50_C4ZM30 Diguanylate cyclase/phosphodiesterase with PAS/P... 289 1e-76 UniRef50_A4W933 Diguanylate cyclase/phosphodiesterase n=3 Tax=En... 289 1e-76 UniRef50_B0CE49 Diguanylate cyclase/phosphodiesterase with PAS/P... 289 1e-76 UniRef50_D2M2P9 Diguanylate cyclase/phosphodiesterase with PAS/P... 289 1e-76 UniRef50_A5ERD3 Diguanylate cyclase/phosphodiesterase n=12 Tax=B... 289 1e-76 UniRef50_B0CCG3 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 289 1e-76 UniRef50_Q2RTE0 Diguanylate cyclase/phosphodiesterase with PAS/P... 289 1e-76 UniRef50_B1J7P7 Diguanylate cyclase/phosphodiesterase with PAS/P... 289 1e-76 UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/P... 289 1e-76 UniRef50_C7RAA4 Diguanylate cyclase/phosphodiesterase with PAS/P... 289 2e-76 UniRef50_C5SMP6 Diguanylate cyclase/phosphodiesterase with PAS/P... 289 2e-76 UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/P... 288 2e-76 UniRef50_B9JAE4 GGDEF family protein n=1 Tax=Agrobacterium radio... 288 2e-76 UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/P... 288 2e-76 UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 288 2e-76 UniRef50_A3UFJ0 Putative uncharacterized protein n=1 Tax=Oceanic... 288 2e-76 UniRef50_Q1JWP9 Diguanylate cyclase/phosphodiesterase with PAS/P... 288 2e-76 UniRef50_C4XGC1 Response regulator receiver protein n=2 Tax=Desu... 288 3e-76 UniRef50_B7JYN2 Response regulator receiver modulated diguanylat... 288 3e-76 UniRef50_A0YP68 Hybrid signal transduction histidine kinase and ... 288 3e-76 UniRef50_Q2B961 Putative uncharacterized protein n=1 Tax=Bacillu... 288 3e-76 UniRef50_B9QWG1 Ammonium transporter, putative n=1 Tax=Labrenzia... 287 4e-76 UniRef50_Q0C2A3 Putative sensory box-containing diguanylate cycl... 287 4e-76 UniRef50_A0RLD3 Diguanylate cyclase/phosphodiesterase n=79 Tax=c... 287 4e-76 UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/P... 287 4e-76 UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 287 4e-76 UniRef50_C6E7Z7 Diguanylate cyclase/phosphodiesterase with extra... 287 5e-76 UniRef50_A3JIW6 Two-component response regulator n=3 Tax=Marinob... 287 5e-76 Sequences not found previously or not previously below threshold: UniRef50_Q89VU0 Bll0955 protein n=2 Tax=cellular organisms RepID... 315 2e-84 UniRef50_Q89HX5 Bll5864 protein n=1 Tax=Bradyrhizobium japonicum... 312 1e-83 UniRef50_B1ZGT4 Diguanylate cyclase/phosphodiesterase n=6 Tax=Me... 310 5e-83 UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/P... 309 1e-82 UniRef50_B1M2I6 Diguanylate cyclase/phosphodiesterase with PAS/P... 309 2e-82 UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxaloba... 307 4e-82 UniRef50_B1M266 Diguanylate cyclase/phosphodiesterase with PAS/P... 305 2e-81 UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Le... 305 2e-81 UniRef50_B1M2C0 Diguanylate cyclase/phosphodiesterase with PAS/P... 305 3e-81 UniRef50_Q07P60 Diguanylate cyclase/phosphodiesterase with PAS/P... 305 3e-81 UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Co... 304 4e-81 UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribac... 303 6e-81 UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/P... 303 6e-81 UniRef50_C6MMM5 Response regulator receiver modulated diguanylat... 303 9e-81 UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/P... 302 2e-80 UniRef50_B0U8J8 Diguanylate cyclase/phosphodiesterase with PAS/P... 302 2e-80 UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultu... 302 2e-80 UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ge... 301 3e-80 UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/P... 300 6e-80 UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 300 6e-80 UniRef50_B7KRA3 Diguanylate cyclase/phosphodiesterase with PAS/P... 300 8e-80 UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthin... 300 8e-80 UniRef50_B0UQT2 Diguanylate cyclase/phosphodiesterase with PAS/P... 299 1e-79 UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Hermini... 298 2e-79 UniRef50_C5CTK8 Diguanylate cyclase/phosphodiesterase with PAS/P... 298 2e-79 UniRef50_B8H3B9 Sensory box/GGDEF family protein n=5 Tax=Cauloba... 298 3e-79 UniRef50_Q5NYX4 Complex sensory protein with histidine kinase do... 298 3e-79 UniRef50_Q20XI9 Diguanylate cyclase/phosphodiesterase n=11 Tax=B... 297 4e-79 UniRef50_B9JLU1 Sensory box/GGDEF family protein n=1 Tax=Agrobac... 297 4e-79 UniRef50_Q3A4W5 Response regulator receiver modulated diguanylat... 297 4e-79 UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/P... 297 5e-79 UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/P... 297 5e-79 UniRef50_A1TX84 Response regulator receiver modulated diguanylat... 297 6e-79 UniRef50_Q1K1R0 Response regulator receiver modulated diguanylat... 297 6e-79 UniRef50_Q89WT2 Bll0596 protein n=1 Tax=Bradyrhizobium japonicum... 297 7e-79 UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/P... 297 7e-79 UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/P... 296 8e-79 UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammapr... 296 9e-79 UniRef50_B1ZEQ0 Diguanylate cyclase/phosphodiesterase with PAS/P... 296 9e-79 UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/P... 296 1e-78 UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/P... 296 1e-78 UniRef50_C6ME82 Response regulator receiver modulated diguanylat... 295 1e-78 UniRef50_Q2SF23 Predicted signal transduction protein containing... 295 1e-78 UniRef50_B8DSE5 Diguanylate cyclase/phosphodiesterase with PAS/P... 295 2e-78 UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/P... 295 2e-78 UniRef50_Q31G31 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 295 2e-78 UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax... 295 2e-78 UniRef50_C6ML43 Response regulator receiver modulated diguanylat... 295 3e-78 UniRef50_A7BQZ3 Sensory box/GGDEF family protein n=1 Tax=Beggiat... 295 3e-78 UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/P... 294 3e-78 UniRef50_C4XRM5 Putative signaling protein n=1 Tax=Desulfovibrio... 294 3e-78 UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/P... 294 4e-78 UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase... 294 4e-78 UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/P... 294 5e-78 UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/P... 293 6e-78 UniRef50_B7GID3 Multidomain signal transduction protein (Contain... 293 6e-78 UniRef50_B8HNE5 Diguanylate cyclase/phosphodiesterase with PAS/P... 293 7e-78 UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 293 7e-78 UniRef50_A5PE71 Sensory box/GGDEF family protein n=1 Tax=Erythro... 293 7e-78 UniRef50_A3J7L9 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 293 8e-78 UniRef50_B8DLW6 Response regulator receiver modulated diguanylat... 293 9e-78 UniRef50_A2SDI4 Signal transduction protein n=2 Tax=Proteobacter... 293 1e-77 UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/P... 293 1e-77 UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodi... 293 1e-77 UniRef50_B1XZW3 Diguanylate cyclase/phosphodiesterase with PAS/P... 293 1e-77 UniRef50_C6E011 Response regulator receiver modulated diguanylat... 292 1e-77 UniRef50_A1ASF8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 292 1e-77 UniRef50_Q0EWZ7 Putative uncharacterized protein n=1 Tax=Maripro... 292 1e-77 UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/P... 292 1e-77 UniRef50_Q1YJA6 Putative diguanylate cyclase n=1 Tax=Aurantimona... 292 2e-77 UniRef50_B5VVW5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ar... 292 2e-77 UniRef50_A1WHK4 Diguanylate cyclase/phosphodiesterase with PAS/P... 292 2e-77 UniRef50_C5SAJ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 292 2e-77 UniRef50_B7KGZ9 Response regulator receiver modulated diguanylat... 292 2e-77 UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 292 2e-77 UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/P... 292 2e-77 UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobact... 292 2e-77 UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 292 2e-77 UniRef50_B4VY11 PAS fold family n=2 Tax=Oscillatoriales RepID=B4... 292 2e-77 UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/P... 292 2e-77 UniRef50_C4WM42 Diguanylate cyclase (GGDEF) domain-containing pr... 292 2e-77 UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/P... 292 2e-77 UniRef50_A1ASK8 Response regulator receiver modulated diguanylat... 292 2e-77 UniRef50_B7KEN2 Diguanylate cyclase/phosphodiesterase with PAS/P... 291 3e-77 UniRef50_Q88HN4 Sensory box protein/GGDEF domain protein n=1 Tax... 291 3e-77 UniRef50_C1DD31 Predicted signal transduction protein containing... 291 3e-77 UniRef50_C0ZBT6 Probable signaling protein YkoW n=1 Tax=Brevibac... 291 3e-77 UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/P... 291 4e-77 UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromato... 291 4e-77 UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya... 291 4e-77 UniRef50_B8H1B9 PAS family GGDEF/EAL protein n=3 Tax=Caulobacter... 291 4e-77 UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/P... 291 4e-77 UniRef50_C6AS31 Diguanylate cyclase/phosphodiesterase with PAS/P... 291 4e-77 UniRef50_A0LH12 Response regulator receiver modulated diguanylat... 291 4e-77 UniRef50_Q39SC6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 290 4e-77 UniRef50_D2LZH2 Diguanylate cyclase/phosphodiesterase with PAS/P... 290 5e-77 UniRef50_A6CPZ0 Putative uncharacterized protein n=1 Tax=Bacillu... 290 5e-77 UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/P... 290 5e-77 UniRef50_Q315P5 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 290 5e-77 UniRef50_Q1ASD1 Diguanylate cyclase/phosphodiesterase with PAS/P... 290 6e-77 UniRef50_Q1H2G8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 290 6e-77 UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/P... 290 6e-77 UniRef50_A6WKV6 Diguanylate cyclase/phosphodiesterase with PAS/P... 290 7e-77 UniRef50_B5ZWQ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 290 8e-77 UniRef50_B6BGL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 290 8e-77 UniRef50_A5VGA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sp... 290 8e-77 UniRef50_Q984Y8 Mll7787 protein n=2 Tax=Mesorhizobium RepID=Q984... 290 9e-77 UniRef50_A4X020 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 290 9e-77 UniRef50_B9ZNS8 Diguanylate cyclase/phosphodiesterase with PAS/P... 289 9e-77 UniRef50_Q1YK72 Putative sensory protein, diguanylate cyclase n=... 289 1e-76 UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 289 1e-76 UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 T... 289 1e-76 UniRef50_Q07PV4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 289 1e-76 UniRef50_A1W268 Diguanylate cyclase/phosphodiesterase with PAS/P... 289 1e-76 UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 289 1e-76 UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/P... 289 1e-76 UniRef50_A4Y0E0 Diguanylate cyclase/phosphodiesterase with PAS/P... 289 1e-76 UniRef50_Q1YLW9 Putative sensory box/GGDEF family protein n=1 Ta... 289 1e-76 UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteob... 289 1e-76 UniRef50_A6SW06 Sensory box protein n=2 Tax=Betaproteobacteria R... 289 1e-76 UniRef50_Q139W0 Diguanylate cyclase/phosphodiesterase with PAS/P... 289 2e-76 UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/P... 289 2e-76 UniRef50_A0L8C6 Response regulator receiver modulated diguanylat... 288 2e-76 UniRef50_Q0F127 Putative uncharacterized protein n=1 Tax=Maripro... 288 2e-76 UniRef50_Q21WZ6 Response regulator receiver modulated diguanylat... 288 2e-76 UniRef50_A4G3M6 Putative two-component response regulator n=1 Ta... 288 2e-76 UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 288 2e-76 UniRef50_A0P1H8 Putative uncharacterized protein n=1 Tax=Labrenz... 288 2e-76 UniRef50_A8TVS6 Diguanylate cyclase/phosphodiesterase with PAS/P... 288 2e-76 UniRef50_Q2J2T1 Diguanylate cyclase/phosphodiesterase n=6 Tax=Rh... 288 2e-76 UniRef50_Q2BRN8 Signal transduction protein containing membrane,... 288 2e-76 UniRef50_A1SZV0 Response regulator receiver modulated diguanylat... 288 3e-76 UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum a... 288 3e-76 UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/P... 288 3e-76 UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromob... 288 3e-76 UniRef50_Q47ED8 Response regulator receiver modulated diguanylat... 288 3e-76 UniRef50_Q07J13 Diguanylate cyclase/phosphodiesterase with PAS/P... 288 3e-76 UniRef50_C6D7W4 Diguanylate cyclase/phosphodiesterase with PAS/P... 287 4e-76 UniRef50_B7KHV9 Diguanylate cyclase/phosphodiesterase with GAF s... 287 4e-76 UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/P... 287 4e-76 UniRef50_A4U3H4 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswalden... 287 4e-76 UniRef50_Q602I2 Sensory box protein/response regulator n=1 Tax=M... 287 4e-76 UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 287 5e-76 >UniRef50_P75990 Uncharacterized protein ycgF n=51 Tax=Enterobacteriaceae RepID=YCGF_ECOLI Length = 403 Score = 543 bits (1401), Expect = e-153, Method: Composition-based stats. Identities = 403/403 (100%), Positives = 403/403 (100%) Query: 1 MLTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGPEEQVKM 60 MLTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGPEEQVKM Sbjct: 1 MLTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGPEEQVKM 60 Query: 61 IYRAICQDPRHYNIVELLCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKGTSKFQLT 120 IYRAICQDPRHYNIVELLCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKGTSKFQLT Sbjct: 61 IYRAICQDPRHYNIVELLCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKGTSKFQLT 120 Query: 121 YDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPIV 180 YDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPIV Sbjct: 121 YDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPIV 180 Query: 181 DPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTADLKSKALAFTMAHALELGDKMIS 240 DPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTADLKSKALAFTMAHALELGDKMIS Sbjct: 181 DPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTADLKSKALAFTMAHALELGDKMIS 240 Query: 241 INLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGI 300 INLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGI Sbjct: 241 INLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGI 300 Query: 301 SVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVS 360 SVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVS Sbjct: 301 SVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVS 360 Query: 361 AMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEKK 403 AMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEKK Sbjct: 361 AMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEKK 403 >UniRef50_A4WAH8 Diguanylate phosphodiesterase n=4 Tax=Enterobacteriaceae RepID=A4WAH8_ENT38 Length = 406 Score = 463 bits (1193), Expect = e-129, Method: Composition-based stats. Identities = 186/408 (45%), Positives = 257/408 (62%), Gaps = 14/408 (3%) Query: 1 MLTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGPEEQVKM 60 MLTTLIYRS + + +V A RN ++TGILLFNG+ F Q+LEG EE V Sbjct: 1 MLTTLIYRSQLNSSCEPFSLTSLVEQAKLRNAGLNITGILLFNGTDFLQILEGTEESVVK 60 Query: 61 IYRAICQDPRHYNIVELLCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKGTSKFQLT 120 ++ I D RH +VELL DY P RRF GM LFDL++ + VL +V LT Sbjct: 61 LFHKIRGDKRHQCVVELLRDYGPRRRFDNVGMVLFDLQVESQKSVLASVLRYSKLDSYLT 120 Query: 121 YDDRALQFFRTFVLATEQSTYFEIPAEDSWL------FIADGSDKELDSCALSPTINDHF 174 DDR +F RTF+ ++S ++ ++W DG + + + F Sbjct: 121 SDDRVFKFIRTFITQGKKSGSRKVYCPNNWKLEREHAPFGDGVEGLISNQIC------QF 174 Query: 175 AFHPIVDPLSRRIIAFEAIVQKNED-SPSAIAVGQRKDGEIYTADLKSKALAFTMAHALE 233 AF PIVDP +I + EA+++ N+ SP IY DL++KA AF +A + Sbjct: 175 AFQPIVDPSEGKITSLEALIRGNDGGSPEHFF-NALDPDRIYEIDLQTKAYAFALADKIG 233 Query: 234 LGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIK 293 +GD I+INLLPM+LVN P AV FL+ I + L+PEQ++VE TE+E+IS F++F AIK Sbjct: 234 IGDHKIAINLLPMSLVNVPGAVEFLVESIAKHHLLPEQVVVEVTENEMISGFNQFNSAIK 293 Query: 294 SLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCT 353 L+AAGI +AID FG+G+AGL LL++FQPD+IKI +E+ITN+H+SGP+QAI+++II CCT Sbjct: 294 QLRAAGIGLAIDDFGSGYAGLSLLTKFQPDKIKIDREIITNIHRSGPKQAIVKSIISCCT 353 Query: 354 SLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPE 401 +EI + A G+ +EW WLESAGI+ FQG LFA+ +LNG+ I WP+ Sbjct: 354 DMEITLVAEGIEQIDEWCWLESAGIKRFQGFLFARPQLNGVGDIYWPQ 401 >UniRef50_B5XQZ5 BLUF domain/cyclic diguanylate phosphodiesterase n=7 Tax=Gammaproteobacteria RepID=B5XQZ5_KLEP3 Length = 405 Score = 461 bits (1187), Expect = e-128, Method: Composition-based stats. Identities = 163/400 (40%), Positives = 240/400 (60%), Gaps = 3/400 (0%) Query: 1 MLTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGPEEQVKM 60 MLTTLIYRS + P+ ++ ++ A+ +NM +TGILLFNG FFQ+LEG EE ++ Sbjct: 1 MLTTLIYRSQVDPARPLTDLDALIHRASGKNMPLGITGILLFNGQQFFQVLEGNEEILES 60 Query: 61 IYRAICQDPRHYNIVELLCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKGTSKFQLT 120 ++ I DPRH ++VEL+ DY+ RRF GM + DLR HE + ++ + T Sbjct: 61 LFSKIQFDPRHRDVVELMRDYSAYRRFRDVGMRMLDLRYHENNAAVEEILRFSTFGETEP 120 Query: 121 YDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPIV 180 +DR + F+ + E W + + P FA IV Sbjct: 121 VNDRMFRLISAFIADGGRYCLPESLQPSRWSMTPAVGNASPRNLTDQPC---QFALQAIV 177 Query: 181 DPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTADLKSKALAFTMAHALELGDKMIS 240 +P RR+ +FEA+++ + Y DL+SKA AF++A L LG + ++ Sbjct: 178 EPAKRRVSSFEALIRSPTGGSPVEMFAAIAAEDRYRFDLESKAFAFSLAARLPLGKQQLA 237 Query: 241 INLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGI 300 +NLLP +L N PDAV +L++ + A L PEQ+++E TE+EVIS FD+F + +K+L+ AG+ Sbjct: 238 VNLLPGSLYNHPDAVGWLMDNLLAAGLRPEQVLIEVTETEVISCFDQFRKVLKALRVAGM 297 Query: 301 SVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVS 360 +AID FGAG++GL LL+RFQPD+IK+ EL+ ++H SG +QAI+ ++++CC L I V Sbjct: 298 KLAIDDFGAGYSGLSLLTRFQPDKIKVDAELVRDIHISGTKQAIVASVVRCCEDLGITVV 357 Query: 361 AMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWP 400 A GV T EEW WL+S GI +FQG LF++ LNGI I WP Sbjct: 358 AEGVETIEEWCWLQSVGIRLFQGFLFSRPCLNGIGEICWP 397 >UniRef50_C9Y9E1 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9E1_9BURK Length = 425 Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 146/417 (35%), Positives = 227/417 (54%), Gaps = 23/417 (5%) Query: 1 MLTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGPEEQVKM 60 ML+ LIY S + + ++ + S A R N++ DV+G+L+++ F Q++EG ++ + Sbjct: 14 MLSQLIYTSQAQPGITPEMLQAIASTAARDNVRMDVSGLLIYDQGCFLQVMEGEDDVLIA 73 Query: 61 IYRAICQDPRHYNIVELLCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKGTSKFQLT 120 +Y+ + DPRH N+V+L+ + RRF + M L RL V + +G S + Sbjct: 74 LYQRLKSDPRHSNLVKLIHEPIAQRRFAQWSMGLAVPRL----GVQAELGLEGFSTWSEL 129 Query: 121 YDDRALQFF-----RTFVLATEQSTYFE------------IPAEDSWLFIADGSDKELDS 163 RALQ RT + A Q + D L I + + Sbjct: 130 LSSRALQNLTEDRVRTVLDAFTQGRWHHAVAPLAAHDGHTSAGRDPELLIPGSTLSAVQR 189 Query: 164 CALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTADLKSKA 223 AL P + FA+ PIVD +RRI ++EA+++ + + ++ DL SK Sbjct: 190 QAL-PHVGPRFAYQPIVDFENRRISSYEALLRGPAGESPQAVLSAFEGDALHRFDLTSKV 248 Query: 224 LAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVIS 283 A ++A L D +S+NLLP +L+ + AV FL+ + P++I++E TE E I+ Sbjct: 249 AALSIAQQLGT-DARLSLNLLPESLLVDAHAVDFLVQAAARHGFTPDRIVLEVTEEEAIT 307 Query: 284 RFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQA 343 D FA+A+K +++AG+ VAID FGAGFAGL LL+ FQPD++KI + ++ NVH+SGPRQA Sbjct: 308 DPDMFADAVKRVRSAGMRVAIDDFGAGFAGLSLLADFQPDKLKIDRCIVQNVHESGPRQA 367 Query: 344 IIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWP 400 I++AI++ C L I V A GV T EE+ WL AG+ QG L A+ L +P + W Sbjct: 368 IVRAIVEFCYCLGIAVVAEGVETVEEFNWLRHAGVNRIQGYLIARPGLCALPPVEWR 424 >UniRef50_B4S2Z3 Putative uncharacterized protein n=2 Tax=Alteromonas macleodii RepID=B4S2Z3_ALTMD Length = 390 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 130/414 (31%), Positives = 209/414 (50%), Gaps = 41/414 (9%) Query: 1 MLTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGPEEQVKM 60 ML L+YRS + + + +++S + N + +TGILLF+G +FFQ+LEG E+V+ Sbjct: 1 MLKQLVYRSKATEKFSEEDLSKIMSDSLPYNEPNGITGILLFDGEYFFQVLEGESEKVEA 60 Query: 61 IYRAICQDPRHYNIVELLCDYAPARRFG---------KAGMELF----DLRLHERDDV-- 105 +Y I +D RH IV++ R FG G + DL L+ + Sbjct: 61 LYEHIKKDRRHSAIVKVTEIVIHERNFGAWLLRTLLVNQGSRCYWLPTDLNLNRESRIFA 120 Query: 106 LQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCA 165 L F G + L+ DDR + V A + Sbjct: 121 LLNSFASGKWRNCLSDDDRKKINAKVAVKAASVDAF------------------------ 156 Query: 166 LSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTADLKSKALA 225 N FAF PIVD R+ EA+++ ++ + E Y DL+SKA+A Sbjct: 157 --ENSNIQFAFQPIVDTFKGRVSTIEALIRSDDGRYPEAILDSLHGDEKYKFDLESKAIA 214 Query: 226 FTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 L + +S+NL P + + P+ +L + + + L P+Q+++E TE+E+IS Sbjct: 215 IAQGAKLLNPSQSLSVNLCPGAITHMPNVADYLCSLLNQHKLKPKQLVLEVTETEIISES 274 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 F + I +++ GI +AID FGAG+AGL LL+ F PD IK+ +++ T +H+ G RQAI Sbjct: 275 AAFYDVIARIRSRGIQIAIDDFGAGYAGLSLLADFSPDIIKLDRKITTGIHEDGHRQAIT 334 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAW 399 +A+++ ++ I + GV T EEW+WL+ G++ FQG LFA+ +LNG+ I + Sbjct: 335 EAVLEFGNAMGIPLVVEGVETMEEWLWLQHVGVQRFQGFLFARPRLNGLSEINF 388 >UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteobacteria RepID=A6SVJ0_JANMA Length = 956 Score = 316 bits (811), Expect = 9e-85, Method: Composition-based stats. Identities = 60/294 (20%), Positives = 113/294 (38%), Gaps = 12/294 (4%) Query: 118 QLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFH 177 + + +R ++ + L + +L + H + Sbjct: 656 EELIKHADIAMYRAKETGRNNFQFYTSSMNERALERLRL-EGDLRNAMERGEFILH--YQ 712 Query: 178 PIVDPLSRRIIAFEAIVQKNEDSPSAIAV-----GQRKDGEIYTADLKSKALAFTM---A 229 P +D + +I+ EA+++ I + G I A Sbjct: 713 PQLDLRTGKIVGVEALIRWQHPELGMIPPMRFIGLAEETGLIVPIGAWVIREACRQNKVW 772 Query: 230 HALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFA 289 LG +S+NL + D + + ++ L P+ + +E TES V++ D Sbjct: 773 QEHGLGSLRMSVNLSARQFAQQ-DLLESIALALEETQLPPQCLEIELTESLVMADVDHAI 831 Query: 290 EAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAII 349 ++ LKA G+ ++ID FG G++ L L RF D +KI + + ++ AI+ +II Sbjct: 832 GILRELKALGVQLSIDDFGTGYSSLSYLKRFPIDVLKIDRSFVNDITTDPDDAAIVASII 891 Query: 350 KCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEKK 403 SL + V A GV T E+ +L+ + QG F++ + + K Sbjct: 892 SLAHSLRLTVIAEGVETEEQLAYLQQHDCDQIQGYFFSRPITADAMEVMLKDDK 945 >UniRef50_Q89VU0 Bll0955 protein n=2 Tax=cellular organisms RepID=Q89VU0_BRAJA Length = 955 Score = 315 bits (808), Expect = 2e-84, Method: Composition-based stats. Identities = 60/280 (21%), Positives = 109/280 (38%), Gaps = 11/280 (3%) Query: 115 SKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF 174 L ++ FE E+ + L H Sbjct: 662 LDADELMKCADLALYQAKARGRGAYQLFEPEMEEEARSRH-ALEHNLRGAL--EAREFHL 718 Query: 175 AFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTMA 229 F P V S + FEA+++ S P+ ++G I L A Sbjct: 719 VFQPQVRLESSELTGFEALLRWKHPSRGFVSPAEFIPIAEENGLIVPIG--EWVLRTACA 776 Query: 230 HALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFA 289 A D +++NL P+ + + + + L P+++ +E TE+ ++ + Sbjct: 777 TAASWPDVTVAVNLSPVQF-RARGLAAMVTSALAEAGLPPQRLELEVTETALLDDSEATI 835 Query: 290 EAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAII 349 E + L+A G+ V++D FG G++ L L +F DRIKI + + + +S AI++ I Sbjct: 836 EILHQLRALGVRVSLDDFGVGYSSLSYLRKFPFDRIKIDRSFVGTLGESPESVAIVRTIA 895 Query: 350 KCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 + L ++ +A GV T E+ ++ G QG F + Sbjct: 896 SLGSVLGVETTAEGVETEEQLDFVRECGCTAVQGYYFGRP 935 >UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3I2_DESAC Length = 791 Score = 314 bits (805), Expect = 4e-84, Method: Composition-based stats. Identities = 71/330 (21%), Positives = 132/330 (40%), Gaps = 19/330 (5%) Query: 73 NIVELLCDYAPARRFGKAGMELFDLRLHE---RDDVLQAVFDKGTSKFQLTYDDRALQFF 129 +I EL A+ F + F + HE + ++ T + + + Sbjct: 449 DIKELSHVSTVAKNFIDTILPSFTIDGHELFITPSMGISIAPTDTQHPKELLAFAEIAMY 508 Query: 130 RTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFA--FHPIVDPLSRRI 187 + L + ++ + EL+S D F + P D S + Sbjct: 509 QAKGLGGNKCQFYTAEMNSRA-----KTRIELESYLRKAVNQDQFVLYYQPQFDIQSGEL 563 Query: 188 IAFEAIVQKNED-----SPSAIAVGQRKDGEIYTAD---LKSKALAFTMAHALELGDKMI 239 + EA+++ SP+ + G I L+ L + Sbjct: 564 VGCEALLRWQHPQMGMISPNDFIPLAEETGVIIEIGEWVLQEACLQNKKWQDAGHSPIRV 623 Query: 240 SINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAG 299 ++N+ P EP + + ++ + PE + +E TES ++ D +K LKA G Sbjct: 624 AVNISPRQF-REPGFLEMIERVVQTTGIKPEWLELEITESLLMDDIDSAINILKQLKAKG 682 Query: 300 ISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQV 359 I +AID FG G++ L L RF R+KI + + ++ +I +A+I S+ ++V Sbjct: 683 IHLAIDDFGTGYSSLSYLKRFPLSRLKIDRSFVRDITTDDNDASITKAVIALAHSMNLKV 742 Query: 360 SAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 A G+ T E+ ++L+ G E+ QG L++ Sbjct: 743 VAEGIETQEQLLFLKEKGCEVGQGYLYSPP 772 >UniRef50_Q89HX5 Bll5864 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89HX5_BRAJA Length = 799 Score = 312 bits (801), Expect = 1e-83, Method: Composition-based stats. Identities = 65/284 (22%), Positives = 115/284 (40%), Gaps = 14/284 (4%) Query: 115 SKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF 174 S + L +R +FE + + + L+ + D F Sbjct: 506 SNADELLKNADLALYRAKADGRGTYRFFETGMDARA-----QARRLLEMDLRAALQRDEF 560 Query: 175 --AFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFT 227 + PI D S R++ FEA+++ N P + G I A T Sbjct: 561 QPYYQPIRDVASGRVVVFEALLRWNHPQRGLIAPINFIPLAEETGLIVQLGEFVLRSACT 620 Query: 228 MAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDE 287 A D +++NL P+ N P+ ++ + + + L ++ +E TES ++ + Sbjct: 621 DAATWP-DDVDVAVNLSPVQFRN-PNLIASVTAALTVSGLPARRLELEITESVLLQNSEA 678 Query: 288 FAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQA 347 + L+A G+ +++D FG G++ L L F D+IKI + ++ + AII+A Sbjct: 679 TLTTLHELRAMGVRISLDDFGTGYSSLSYLRSFPFDKIKIDRSFVSELATREDSMAIIRA 738 Query: 348 IIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 + SL I +A GV + L G QG LF+K + Sbjct: 739 VTGLGRSLGIVTTAEGVENDAQLELLRREGCTQAQGYLFSKPRP 782 >UniRef50_Q3A2X0 Motility repressor MorA n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A2X0_PELCD Length = 643 Score = 312 bits (799), Expect = 2e-83, Method: Composition-based stats. Identities = 80/408 (19%), Positives = 147/408 (36%), Gaps = 46/408 (11%) Query: 19 KIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHYN 73 +++ ++ A+R + +L+ + F Q+ + +E + ++ + + + Sbjct: 210 DMDKALAKASRNTA---MVAVLMLDLDDFKQINDTTGHAKGDEMLLLLTSRLREQLGEKD 266 Query: 74 ----------IVELLCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKGTSKFQL---- 119 +V L + K L LR + D V+ VF + L Sbjct: 267 SLARLGGDEFVVVLNEIDSATCAAKKTEKILASLRDNPFDLVVAKVFASASIGIALFPQN 326 Query: 120 ------TYDDRALQFFRTFVLATEQSTYFEIPAEDSW---LFIADGSDKELDSCALSPTI 170 + + + +F + G + + Sbjct: 327 GRDAETLLKHADMAMYEAKNVGRNTYRFFSDELHRRTIERHKLEVGLRRAVRK------K 380 Query: 171 NDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIY---TADLKSK 222 + P VD + RI+A EA+V+ PS + G I+ L++ Sbjct: 381 EFFLVYQPQVDLGTGRIVALEALVRWQHPEAGVLLPSTFIPVAEETGLIHIMGEWILRTA 440 Query: 223 ALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVI 282 + L I++N +PD V + + + L P + +E TES + Sbjct: 441 CHQAMQWQRMGLPPMRIAVNFSARQF-RQPDLVERIEQILLESGLPPHHLELEITESVFM 499 Query: 283 SRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQ 342 + E + LK I +AID FG G++ L L F DR+KI+Q+ + ++ Sbjct: 500 ENLESAIETLVDLKTRAIQIAIDDFGTGYSSLNYLKNFPLDRLKIAQDFVRDIPDDEDDA 559 Query: 343 AIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 II+ I+ L I+V A GV T E+ +L G QG FA+ Sbjct: 560 TIIETIMAMANRLGIKVLAEGVETMEQVTFLRRKGCHEMQGFYFARPM 607 >UniRef50_B7KTV8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Methylobacterium extorquens group RepID=B7KTV8_METC4 Length = 772 Score = 312 bits (799), Expect = 2e-83, Method: Composition-based stats. Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 10/281 (3%) Query: 116 KFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFA 175 + + +R +FE D L ++L + + Sbjct: 477 TAEELLKNADAALYRAKTAGRGTFRFFEPEM-DRKLQARQRLVQDLRNALTRDEL--RLD 533 Query: 176 FHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTMAH 230 + P V + I EA+++ SP + G I + A A Sbjct: 534 YQPFVKSETGVISGCEALLRWRHPERGMISPVEFIPLAEESGLIVPIGMWVIQQACREAA 593 Query: 231 ALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAE 290 + IS+N+ P+ + D +L + ++ L P ++ VE TE+ +I D E Sbjct: 594 SWP-STYRISVNVSPVQFRSR-DLPQVILAALTSSGLAPARLEVEVTEAVLIDDADTALE 651 Query: 291 AIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIK 350 ++ +++ G+ VA+D FG G++ L L RF D+IKI + + + Q I+QAI Sbjct: 652 ILRQIRSLGVRVALDDFGTGYSSLSYLRRFPFDKIKIDRSFVQELDTRHDSQVIVQAIRD 711 Query: 351 CCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 L + V+A GV T ++ L G E QG L+++ + Sbjct: 712 MAQGLGMTVTAEGVETDDQAKRLRQTGCEELQGFLYSRPRP 752 >UniRef50_B1ZGT4 Diguanylate cyclase/phosphodiesterase n=6 Tax=Methylobacterium RepID=B1ZGT4_METPB Length = 574 Score = 310 bits (795), Expect = 5e-83, Method: Composition-based stats. Identities = 59/277 (21%), Positives = 112/277 (40%), Gaps = 10/277 (3%) Query: 120 TYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPI 179 L +R +FE ++ + + +L AF P Sbjct: 283 LLKHADLALYRAKAEGRGTHRFFEPAM-NAQMQARRSLEIDLRRAL--ALKQFDLAFQPQ 339 Query: 180 VDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTMAHALEL 234 + + +I+ FEA+++ N SP+ + G I + A A Sbjct: 340 IQLETGQIVGFEALLRWNHPERGPVSPALFIPLAEEIGLIVGIGEWALRTACREAAGWTQ 399 Query: 235 GDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKS 294 I++NL P+ V +++ + L P ++ +E TE ++ D + + Sbjct: 400 P-ASIAVNLSPVQF-RGGRLVETVMHVLAQTGLDPARLELEITEGALLENTDSVLDVLNG 457 Query: 295 LKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTS 354 L+A G+ +++D FG G++ L L +F D+IKI Q + + + AI++AI + S Sbjct: 458 LRALGVKISMDDFGTGYSSLSYLQKFPFDKIKIDQSFVRGMEGNAECGAIVRAIARLGAS 517 Query: 355 LEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 L ++ +A GV T + + + G QG L + Sbjct: 518 LGMRTTAEGVETATQLDAIRAEGCTEVQGYLTGRPMP 554 >UniRef50_A4U4R0 Sensory box/GGDEF family protein n=3 Tax=Magnetospirillum RepID=A4U4R0_9PROT Length = 840 Score = 310 bits (795), Expect = 6e-83, Method: Composition-based stats. Identities = 58/300 (19%), Positives = 125/300 (41%), Gaps = 11/300 (3%) Query: 98 RLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGS 157 ++ + +F ++ + L FR+ +F + D+ + Sbjct: 526 EVNTSTSIGITIFPDDAVDSEVLLKNADLAMFRSKAEGRNNY-HFYVAEMDAEIQARKVV 584 Query: 158 DKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDG 212 + +L + + H + P+++ + ++ EA+++ SP + Sbjct: 585 EHDLRVALGTDQLEMH--YQPLIEMKTGEVVGCEALIRWKHPTRGWVSPVEFIPIAERTD 642 Query: 213 EIYTADLK---SKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVP 269 I L L + I++NL P+ N ++ + + + P Sbjct: 643 LIVPLGRWILHRSCLQGRDWARAGLPPQKIAVNLSPVQFKNHTALLAMIADILDQTGFPP 702 Query: 270 EQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQ 329 +Q+ +E TE + + + ++ L+ G+ ++ID FG G++ L L RF D++KI + Sbjct: 703 DQLQLEITEGIAMQNVEATVDVLRQLRDMGVLISIDDFGTGYSSLNYLKRFPVDKLKIDR 762 Query: 330 ELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 + ++ A++ AI+ SL +V+ GV T E+ +L++ G++ QG FAKA Sbjct: 763 SFVVDIGLHPDNAAVVNAIVTLGHSLGTRVNVEGVETIEQLDFLKAHGVDEAQGFYFAKA 822 >UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Bacteria RepID=B2JCW5_BURP8 Length = 1040 Score = 310 bits (794), Expect = 8e-83, Method: Composition-based stats. Identities = 66/293 (22%), Positives = 123/293 (41%), Gaps = 16/293 (5%) Query: 107 QAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCAL 166 ++F + + L +R + +++ + ++ G+ L+ Sbjct: 730 ASLFPQDGDDAETLMKKADLAMYRAKDMGRNTFQFYQPE-----MNVSAGARLNLERRLR 784 Query: 167 SPTINDHF--AFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYT--- 216 ++ F + P VD + +++ EA+V+ ++ PS + G I Sbjct: 785 RALRDNEFLLHYQPQVDIETGQVVGMEALVRWHDPEVGLIPPSQFIPVAEESGLIGPLSE 844 Query: 217 ADLKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEF 276 L+ L +S+NL + D ++ ++ L P+ + +E Sbjct: 845 WVLREACRQNKAWQDEGLPPARVSVNLSARQF-QQRDIAKLVMQVLEETGLDPQYLELEL 903 Query: 277 TESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVH 336 TES ++ +E + L A GI +AID FG G++ L L RF DR+KI + ++++ Sbjct: 904 TESTIMRNAEEAVSMLNELHALGIGLAIDDFGTGYSSLSYLKRFPVDRLKIDRSFVSDIG 963 Query: 337 KSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 +S + I AII SL +QV A GV T + +L+ + QG FAK Sbjct: 964 ESSDDETITSAIIALAHSLNLQVIAEGVETSTQLDFLKERACDEMQGYFFAKP 1016 >UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Firmicutes RepID=A4J477_DESRM Length = 947 Score = 309 bits (793), Expect = 1e-82, Method: Composition-based stats. Identities = 61/302 (20%), Positives = 118/302 (39%), Gaps = 16/302 (5%) Query: 98 RLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGS 157 H + A++ + + + ++ + ++ + Sbjct: 633 EFHITTSIGIALYPDDGTDAESLLKNADAAMYQAKEMGRNNYQFYTPT-----MNAQTLR 687 Query: 158 DKELDSCALSPTINDHFA--FHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRK 210 EL++ F + P V+ + +I+ EA+++ SP+ + Sbjct: 688 RFELENNLRRALDRKEFVIYYQPQVEIHTGKIVGVEALIRWQHPQRGMISPAEFIPMAEE 747 Query: 211 DGEIYTADLKSKALAFTM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANAL 267 G I A +++NL + +P ++ N ++ L Sbjct: 748 TGLIIPIGEWILRRACAQNKAWQDRGFSPMRVTVNLSARQFL-QPHLPQYISNVLEDTGL 806 Query: 268 VPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKI 327 P+ + +E TES + + + L+ GI++AID FG G++ L L R D +KI Sbjct: 807 GPQWLELEITESLAMKDVAFTEKTLIELRKMGITLAIDDFGTGYSSLNYLKRLPIDILKI 866 Query: 328 SQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFA 387 + I +++ AII AII +L+++V A GV T E+ M+L ++ QG LF Sbjct: 867 DRSFIHDLNTESDDVAIISAIITLGHNLKMKVVAEGVETKEQLMFLRQQQCDLMQGYLFT 926 Query: 388 KA 389 K Sbjct: 927 KP 928 >UniRef50_B1M2I6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M2I6_METRJ Length = 819 Score = 309 bits (791), Expect = 2e-82, Method: Composition-based stats. Identities = 63/283 (22%), Positives = 113/283 (39%), Gaps = 12/283 (4%) Query: 115 SKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF 174 + + Y L +R F D +++L T+ H Sbjct: 514 TDAEPLYRRADLALYRAKAEGRGTYRIFTPAM-DEEAEERRVLERDLRQALDDNTLGLH- 571 Query: 175 AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTMA 229 + P VD + ++ FEA+++ SP+ + G I L L Sbjct: 572 -YQPQVDGHTGALVGFEALLRWTHPVRGSVSPNLFVPLAEETGLIVA--LGDWVLREACR 628 Query: 230 HALELGD-KMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEF 288 A + +++NL P +PD +L + L P+++ +E TES +I+ Sbjct: 629 EAAQWAQPLKVAVNLSPRQF-QKPDLPETVLAILAETGLSPDRLELEVTESIIINDMARA 687 Query: 289 AEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAI 348 ++ LK+ GI +++D FG G+A L L F D++KI + + + I++A+ Sbjct: 688 VGILRRLKSYGIRISMDDFGTGYASLATLQAFPFDKLKIDRSFVAQLGTGPQAAVIVRAV 747 Query: 349 IKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 + SL + V A GV T + +L QG LF + + Sbjct: 748 LSLGRSLGMGVVAEGVETHAQMKFLTEEACGEMQGYLFGRPRP 790 >UniRef50_C1DB08 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DB08_LARHH Length = 1092 Score = 308 bits (790), Expect = 2e-82, Method: Composition-based stats. Identities = 69/319 (21%), Positives = 120/319 (37%), Gaps = 21/319 (6%) Query: 95 FDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDS---WL 151 DLR+ V AVF + + + +F +D +L Sbjct: 775 LDLRVTPSLGV--AVFPRDGNDCDALLRHADAALYHAKSRGRNTYRFFTREIDDRVSEYL 832 Query: 152 FIADGSDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAV 206 I G L+ + P VD R++ EA+++ SP Sbjct: 833 HIEHGLRSALERG------EFELHYQPQVDMAFGRVVGVEALLRWKHPEQGMISPVRFVP 886 Query: 207 GQRKDGEIYTADLK---SKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIK 263 + G I + + L +++NL + + + Sbjct: 887 IAEETGLIVPIGMWVIREACRQAMLWRRAGLRPMTMAVNLSGRQFSRS--VIEAIDEALA 944 Query: 264 ANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPD 323 + L P + VE TES ++ E +++L+A G++VA+D FG G++ L L RF D Sbjct: 945 DSGLDPRWLQVEVTESVIMEDTQEAYTVLEALRARGLTVAVDDFGTGYSSLAYLKRFPID 1004 Query: 324 RIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQG 383 ++KI + I ++ I+ AII +L I+V A GV T +W +L G + QG Sbjct: 1005 KLKIDRSFIRDIDLDEDNPVIVDAIIGMAHNLRIKVLAEGVETRAQWDYLRQQGCDEVQG 1064 Query: 384 DLFAKAKLNGIPSIAWPEK 402 L ++ + E+ Sbjct: 1065 YLVSRPQPAAALGQWMLER 1083 >UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxalobacteraceae RepID=A6T0F0_JANMA Length = 699 Score = 307 bits (787), Expect = 4e-82, Method: Composition-based stats. Identities = 66/287 (22%), Positives = 116/287 (40%), Gaps = 16/287 (5%) Query: 116 KFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFA 175 + + ++ L YF S EL + N+ F Sbjct: 410 DAETLLKNADSAMYKAKELGRNNFQYFSAEMNSS-----VTDRLELLNRLRQAITNEDFV 464 Query: 176 --FHPIVDPLSRRIIAFEAIVQKNE-----DSPSAIAVGQRKDGEIYTAD---LKSKALA 225 + P V S +II EA+V+ N SP++ + G I L++ Sbjct: 465 LHYQPKVSLASHQIIGAEALVRWNSAHSGMVSPASFIPLAEETGLIIPLGEWVLRTACRQ 524 Query: 226 FTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 IS+NL P L D V + + L + + +E TES + + Sbjct: 525 NRAWQDAGYPPIPISVNLSPRQLAR-GDIVEVVERILTETGLEAQHLELEITESVMTTDV 583 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 ++ + L++ G+ +++D FG G++ L L RF D +KI Q + ++ AI+ Sbjct: 584 EKSFALLTQLRSLGVKISLDDFGTGYSSLSYLKRFPVDTLKIDQSFVRDIATDQDSAAIV 643 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLN 392 +AII +L + V A G+ T +++ +L + G + QG L +K N Sbjct: 644 KAIISLGRNLNLTVLAEGIETEDQFQFLLANGCDEGQGYLMSKPVPN 690 >UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4K8_AZOSE Length = 698 Score = 307 bits (787), Expect = 5e-82, Method: Composition-based stats. Identities = 67/309 (21%), Positives = 117/309 (37%), Gaps = 12/309 (3%) Query: 91 GMELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSW 150 + + L L + A+ + ++ + + +R ++ + Sbjct: 379 SVRIGSLELPLSASIGVALAPRDGRDPEMLLKNADIAMYRAKERGRNNYCFYGPEMDHHA 438 Query: 151 LFIADGSDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIA 205 + EL + H + P VD + + EA+V+ P Sbjct: 439 RRRL-TVESELRRALAGGELEAH--YQPQVDLATGALTGAEALVRWRHPERCLLLPGEFI 495 Query: 206 VGQRKDGEIYTAD---LKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEI 262 + G I L++ T D +++NL + D V + + + Sbjct: 496 AVAEETGLIVPLGEQVLRAACRQSTRWREAGRPDLKVAVNLSGHQF-RQHDLVEQVCDIL 554 Query: 263 KANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQP 322 Q+ +E TES ++ D + L+ GI++AID FG G++ L L RF Sbjct: 555 AETGAHAAQLELEITESVAMADADGSVATLAGLRRQGIALAIDDFGTGYSSLSYLKRFPI 614 Query: 323 DRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQ 382 D +KI + I + G AI+QAII SL + + A GV TP + +L + G Q Sbjct: 615 DTLKIDRSFIQGIPADGDDTAIVQAIIAMARSLRLSLLAEGVETPAQREFLVAQGCRSGQ 674 Query: 383 GDLFAKAKL 391 G LF +A Sbjct: 675 GFLFGRAMP 683 >UniRef50_B6QZR2 Sensory box/ggdef family protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QZR2_9RHOB Length = 1031 Score = 307 bits (787), Expect = 5e-82, Method: Composition-based stats. Identities = 65/279 (23%), Positives = 121/279 (43%), Gaps = 12/279 (4%) Query: 119 LTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHP 178 + + +FE E++ L + + +L + + + F P Sbjct: 707 ELMSKADIALYEAKEAGRNTFAFFEDKMEEAIL-LRRTMEGDLRNALENEEL--QLHFQP 763 Query: 179 IVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTMAHALE 233 +R I+ FEA+++ N P+ + G I L A A + Sbjct: 764 QARSDTRSIVGFEALLRWNHPEKGLIAPNNFIPVAEESGLIIPIG--RWVLNEACAQASQ 821 Query: 234 LGDK-MISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAI 292 ++ + +NL P+ +E + + + + L PE++ +E TES +I + Sbjct: 822 WPERYRVGVNLSPVQFCDE-YLIQEVEGALARSGLTPERLELEITESVLIHDDRRALNTL 880 Query: 293 KSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCC 352 + LK GI++A+D FG G++ L L RF DR+KI + ++ V ++ AII+A+I Sbjct: 881 RQLKELGITIALDDFGTGYSSLSYLRRFPFDRLKIDRSFVSGVTQTPELAAIIRAVIDLG 940 Query: 353 TSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 +L ++V A GV T E L + + QG L + ++ Sbjct: 941 QALGMEVIAEGVETEPELELLRNESCDEVQGYLIGRPQI 979 >UniRef50_A8IFX4 Sensory box/GGDEF family protein n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IFX4_AZOC5 Length = 833 Score = 306 bits (785), Expect = 9e-82, Method: Composition-based stats. Identities = 69/288 (23%), Positives = 127/288 (44%), Gaps = 17/288 (5%) Query: 111 DKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTI 170 GTS +L + L +R Q+ FE E + L S + L+ S Sbjct: 541 ADGTSVIEL-LKNADLALYRAKAEGRGQARLFEPEMEHTAL-----SRRSLELDLRSAWE 594 Query: 171 NDHF--AFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKA 223 N F F P R++ FEA+++ + P+ + G I L + Sbjct: 595 NGQFFLVFQPFFRVGDRKLCGFEALLRWRHPTRGIVAPATFIACAEETGLILP--LGAWV 652 Query: 224 LAFTMAHALELGD-KMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVI 282 L A + D +++NL P+ + ++ + L P ++ +E TES ++ Sbjct: 653 LTEACRAAADWPDDVRLAVNLSPLQF-RSGHMPDQIREALRVSGLKPSRLELELTESTLL 711 Query: 283 SRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQ 342 A++ L++ GI++A+D FG G++ L L DRIKI + I+ + + P + Sbjct: 712 EEGSGIHGALQGLRSQGITIALDDFGTGYSSLSYLRSLPIDRIKIDRGFISRICEDDPSR 771 Query: 343 AIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 AI++A+++ +L+++ +A G+ T E+ L + G QG L + Sbjct: 772 AIVRAVLQLSAALKLETTAEGIETEEQLETLRAEGCGYVQGYLLGRPM 819 >UniRef50_B9R1X0 Cyclic diguanylate phosphodiesterase domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R1X0_9RHOB Length = 710 Score = 306 bits (784), Expect = 1e-81, Method: Composition-based stats. Identities = 62/284 (21%), Positives = 118/284 (41%), Gaps = 13/284 (4%) Query: 113 GTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTIND 172 G+ + L +R ++ L KE++ + D Sbjct: 358 GSWRSSRLLHCADLALYRAKHEGRSTFCWYT-----QDLDAEAQKRKEIEQGLVKALKFD 412 Query: 173 HFA--FHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALA 225 + P + +EA+++ + P + G I A Sbjct: 413 QLKLKYQPQYALSDGSLKGYEALIRWEHPTKGMMRPDSFIPIAEDTGLIEDIGNWVLEQA 472 Query: 226 FTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 A ++ ++IN+ P D + ++++ L P+++ +E TES +IS Sbjct: 473 CREAALWPNSNRRVAINMSPAQFA-AGDIQKRVARALQSSGLDPKRLEIEITESLLISNT 531 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 D ++ ++ G+S+A+D FG G++ L LS F D+IKI + I ++ K AI+ Sbjct: 532 DSVVHTLRQIRDMGVSIAMDDFGTGYSSLSYLSLFPFDKIKIDKAFIQDLGKEASTDAIV 591 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 +I+ SL + ++A GV T E+ + L +AG ++ QG L+ K Sbjct: 592 TSIVGLGRSLNVTITAEGVETEEQAILLRAAGCDLIQGYLYGKP 635 >UniRef50_C1D1W4 Putative diguanylate-cyclase n=1 Tax=Deinococcus deserti VCD115 RepID=C1D1W4_DEIDV Length = 856 Score = 306 bits (784), Expect = 1e-81, Method: Composition-based stats. Identities = 77/334 (23%), Positives = 131/334 (39%), Gaps = 18/334 (5%) Query: 79 CDYAPARRFGKAGMELFDLR---LHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLA 135 ARR F ++ H + +V + Q L +R Sbjct: 521 HAITVARRVLNELTRPFVVQGRAFHLGASIGISVSPQAGRDGQTLLRHADLAMYRAKREK 580 Query: 136 TEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQ 195 + + + + + L + SD L P N + P V +++ EA+V+ Sbjct: 581 SGFAVFEAQLNQQAQLRLQLASD--LREALREPGANLELHYQPQVRLHDGQVVGAEALVR 638 Query: 196 KNED-----SPSAIAVGQRKDGEIYTAD---LKSKALAFTMAHALELGDKMISINLLPMT 247 SP+ G I ++ A G +++N+ + Sbjct: 639 WRHPHLGMVSPAQFIPVAEDTGMIVPLGTWVMEEACRQAVAWAAAGHGAMRVAVNVSALQ 698 Query: 248 LVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHF 307 PD V + ++A L ++ VE TES V+ E E ++ L+A G+SVA+D F Sbjct: 699 FAR-PDFVDTVSATLRATGLEAGRLEVELTESAVMEDVKESVERMERLRALGVSVAVDDF 757 Query: 308 GAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATP 367 G G++ L L R + +KI + I N+ + ++++QAI+ L ++ A GV TP Sbjct: 758 GTGYSSLSYLQRLPLNVLKIDRTFIQNLGVNATSRSVVQAIVGLAQHLNLECVAEGVETP 817 Query: 368 EEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPE 401 +E L G QG FAK +P+ A E Sbjct: 818 DEREALIEVGCRYAQGFFFAKP----LPAPALLE 847 >UniRef50_B1M266 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Proteobacteria RepID=B1M266_METRJ Length = 960 Score = 305 bits (783), Expect = 2e-81, Method: Composition-based stats. Identities = 63/283 (22%), Positives = 115/283 (40%), Gaps = 12/283 (4%) Query: 115 SKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF 174 S + + R A +FE D+ L +++L + Sbjct: 665 SNADKLLKNAEVALDRGKTEARGAFRFFEPAM-DARLIARRIMERDLRDALAREAFEVY- 722 Query: 175 AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTMA 229 + PI + RI FEA+++ N SP+ + G I L L Sbjct: 723 -YQPIYSLETDRICGFEALLRWNHPVRGFVSPAEFIPIAEELGLIVP--LGEWVLRRACE 779 Query: 230 HALELGD-KMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEF 288 A D +++N+ + + V+ + ++ L ++ +E TE+ +++ Sbjct: 780 EAARWPDELKVAVNVSAVQFTS-ASLVTAVREALRRTGLPGRRLELEITETVLVANPGAT 838 Query: 289 AEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAI 348 + SL+A G+ VA+D FG G++ L L F D+IKI Q + ++ I++A+ Sbjct: 839 TAILHSLRALGVRVAMDDFGTGYSSLSYLRSFPFDKIKIDQSFVRDLCVKDGTDFIVRAV 898 Query: 349 IKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 I SL + +A GV T + L + G + QG LF++ Sbjct: 899 IGLGASLGMTTTAEGVETEAQLAHLRAEGCDEVQGYLFSRPVP 941 >UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Leptospirillum sp. Group II RepID=B6AQA1_9BACT Length = 702 Score = 305 bits (782), Expect = 2e-81, Method: Composition-based stats. Identities = 67/362 (18%), Positives = 141/362 (38%), Gaps = 25/362 (6%) Query: 53 GPEEQVKMIYRAICQDP-RHYNIVELLCDYAPARRFGKAGMELFDLRLHERDDVLQAVFD 111 G +E V + +DP + + I + D ME+ L + ++F Sbjct: 343 GGDEFVIVFPE--QKDPGKVHEIARKIRDCVAE------NMEVDGQSLSVTTSIGISLFP 394 Query: 112 KGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTIN 171 + F+ + + Q ++ L + E+++ Sbjct: 395 HDGTTFRTLLASADSAMYYAKSKGSGQIQFY-----SGELNDSAALRIEMENDLRRGIEK 449 Query: 172 DHFA--FHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLK---S 221 + F + P V + + + EA+V+ N P + G I Sbjct: 450 EEFVLYYQPKVTLATGEVESVEALVRWNHPEKGILPPHYFIPRAEETGLIIPLGRWIMDR 509 Query: 222 KALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEV 281 + +++NL + +N+ D + +L+ ++++ L PE + +E TES + Sbjct: 510 ACREAVIWQQAGFSRLRVAVNLSALQFINQ-DLMKEILDALESSGLPPECLELEITESLL 568 Query: 282 ISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPR 341 + + + ++ G+ VAID FG G++ L +F DR+KI + IT++ + Sbjct: 569 MEDPEGAMRTLSGIRQKGVHVAIDDFGTGYSSFSYLKKFPLDRLKIDRSFITDICDNPND 628 Query: 342 QAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPE 401 AI++ II +L ++V A GV + + L++ + +QG ++ G + E Sbjct: 629 AAIVRTIITLGHNLNLKVIAEGVESQAQLEMLKAMECDAYQGFFNSRPLPPGELAERLKE 688 Query: 402 KK 403 + Sbjct: 689 MR 690 >UniRef50_B1ZFY0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Methylobacterium RepID=B1ZFY0_METPB Length = 833 Score = 305 bits (781), Expect = 2e-81, Method: Composition-based stats. Identities = 67/300 (22%), Positives = 117/300 (39%), Gaps = 10/300 (3%) Query: 97 LRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADG 156 LR+ AV+ S + +R +FE D L Sbjct: 509 LRIEIGASAGIAVYPSDGSTAETLKRAADTALYRVKDEGRGTVRFFEAAM-DEQLQARRR 567 Query: 157 SDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKD 211 + EL + + PIV+ + I FEA+++ + P+ + Sbjct: 568 IEHELSGAIPRGEL--QLYYQPIVNGRTGEIETFEALIRWHHPERGCVPPADFIPLAEQT 625 Query: 212 GEIYTADLKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQ 271 +I A A A +S+N+ P +P + + + L P + Sbjct: 626 DQIGRIGAWVLDTACAAAAAWPHP-WRVSVNVSPKQF-RQPGFAAGVAAVLGRYGLPPGR 683 Query: 272 IIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQEL 331 +++E TE I E + +L+ G+ +A+D FG G++ L L RF+ D+IK+ Q Sbjct: 684 LVLEITEGVFIQDATMAVEVLTALRTLGVRLALDDFGTGYSSLSYLQRFKFDKIKVDQSF 743 Query: 332 ITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 + + + I++AI +L +QV+ GV T E+ L G + QG LFA+ Sbjct: 744 VRRLGRHADTLTIVRAITHLGHNLGLQVTVEGVETQEQLAMLRELGCDQMQGYLFARPAP 803 >UniRef50_B1M2C0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M2C0_METRJ Length = 703 Score = 305 bits (781), Expect = 3e-81, Method: Composition-based stats. Identities = 64/284 (22%), Positives = 116/284 (40%), Gaps = 14/284 (4%) Query: 115 SKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF 174 + + L R FE ++ A+ + ++L+ D Sbjct: 402 FDSETLFRRADLALHRAKTEGRNTHRVFEPAMDE-----AEAARRDLERDLRQAIEGDEL 456 Query: 175 --AFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFT 227 + P V + R++ FEA+V+ + P+A + G I A Sbjct: 457 ILYYQPQVSTGTGRLLGFEALVRWEHPTRGLVPPNAFIPLAEESGLILPLGEWVLRAACR 516 Query: 228 MAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDE 287 A +++NL P + D +L + L P ++ +E TE+ +I+ Sbjct: 517 EAARWAHP-LKVAVNLSPRQF-QQADLPERVLAILTETGLAPTRLELEITETLIINDMAR 574 Query: 288 FAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQA 347 ++ LKA G+S+A+D FG G++ L L F D+IKI + + +V S I++A Sbjct: 575 ALGILRRLKAFGVSIAMDDFGTGYSSLATLQAFPFDKIKIDRSFVGHVEVSPQAAVIVRA 634 Query: 348 IIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 ++ SL + V A GV T + +L + + QG L +K + Sbjct: 635 VLGLGRSLGMSVVAEGVETDAQMRFLAAEACDEAQGYLISKPQP 678 >UniRef50_Q07P60 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=12 Tax=Rhizobiales RepID=Q07P60_RHOP5 Length = 834 Score = 305 bits (781), Expect = 3e-81, Method: Composition-based stats. Identities = 63/282 (22%), Positives = 115/282 (40%), Gaps = 12/282 (4%) Query: 118 QLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFH 177 + + + +R +FE + D + +L + Sbjct: 542 EDLLRNADMALYRAKESGGGNHHFFEKEMDRQAQKRRD-MEIDLRYAFAKG--QFELYYQ 598 Query: 178 PIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTMAHAL 232 P+VD R+ FEA+++ SP+ G I L L A A Sbjct: 599 PLVDVARDRVAGFEALLRWRHPERGMISPADFIPVAEDIGLIV--GLGEWVLRQACAEAA 656 Query: 233 ELG-DKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEA 291 + I++NL P+ + + V ++ + + L P ++ +E TES ++ + Sbjct: 657 TWPSEIKIAVNLSPVQFRSR-NLVQAVIGALAQSGLSPRRLELEITESVFLAETEANLAT 715 Query: 292 IKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKC 351 + ++ G+ +++D FG G++ L L F D+IKI + + ++ + AI++AI Sbjct: 716 LHQMRDLGVRISMDDFGTGYSSLSYLRSFPFDKIKIDRSFVQDLAQRPDCLAIVRAIAGL 775 Query: 352 CTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNG 393 SL I +A GV T + WL G QG LF+ A+ G Sbjct: 776 GRSLNITTTAEGVETQAQLDWLREEGCNEVQGFLFSPARPAG 817 >UniRef50_B1M3H8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=9 Tax=Alphaproteobacteria RepID=B1M3H8_METRJ Length = 829 Score = 304 bits (780), Expect = 3e-81, Method: Composition-based stats. Identities = 74/293 (25%), Positives = 127/293 (43%), Gaps = 11/293 (3%) Query: 106 LQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCA 165 + + GT L + L +R FE D+W+ + EL Sbjct: 524 VACLPRDGTDPETL-MKNADLALYRAKAEGGSTFRCFEPEM-DAWVQARRRRENELREAF 581 Query: 166 LSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLK 220 + + P++D S RI+AFEA+++ + SP+ + G I Sbjct: 582 ARGQFS--LVYQPLMDARSDRILAFEALLRWHHPEHGPVSPAEFVPLAEETGLIVPIGAW 639 Query: 221 SKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESE 280 AF A +++NL P+ N V + + A L P ++ +E TES Sbjct: 640 VMQTAFAEAATWP-ETIRLAVNLSPIQFRNRT-LVETVRGALAATGLDPRRLELEITESV 697 Query: 281 VISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGP 340 +++ + +L+ GI +A+D FG G++ L L F D+IK+ + ++ V ++ Sbjct: 698 LLADSAANLATLHALRDMGIRIAMDDFGTGYSSLSYLRSFPFDKIKLDRSFVSQVGENTH 757 Query: 341 RQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNG 393 AI++A+ TSL I +A GV TPE+ L + G + QG LF++A Sbjct: 758 CTAIVRAVASLGTSLGIATTAEGVETPEQLAMLRAEGYDEVQGFLFSRAVPGP 810 >UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Comamonadaceae RepID=A1W8G6_ACISJ Length = 756 Score = 304 bits (779), Expect = 4e-81, Method: Composition-based stats. Identities = 61/293 (20%), Positives = 117/293 (39%), Gaps = 18/293 (6%) Query: 108 AVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEI---PAEDSWLFIADGSDKELDSC 164 A+F + S F+ +R +F L + + + L+ Sbjct: 456 ALFPEHGSDFETLIQSADTAMYRAKADGRNSFRFFTPTMQAQSARALQLTNALRRALERN 515 Query: 165 ALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADL 219 LS + P V + R+ EA+++ + SP+ G+I Sbjct: 516 QLS------LHYQPQVSIATGRVCGVEALLRWHHPELGAVSPAEFIPVAEDTGQILPIGE 569 Query: 220 KSKALAFTM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEF 276 A H+ L +++NL + +P + + + + P + +E Sbjct: 570 WVLRTALAQLRTWHSQGLPALTMAVNLSAVQF-RQPQLLELVDRLLAEYGVQPHLLELEL 628 Query: 277 TESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVH 336 TE+ ++ + L A G+ +++D FG G++ L L RFQ R+KI Q + ++ Sbjct: 629 TENVAVADPHAAIATMDQLHAKGVRLSMDDFGTGYSSLSHLKRFQIYRLKIDQSFVRDLD 688 Query: 337 KSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 G +AI+ AII+ +L ++ +A GV T + +L G + QG F++ Sbjct: 689 HDGNDRAIVSAIIRMAQALGMRTTAEGVETAHQLTFLREQGCDEAQGFYFSRP 741 >UniRef50_C5SFB8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SFB8_9CAUL Length = 726 Score = 303 bits (778), Expect = 6e-81, Method: Composition-based stats. Identities = 66/296 (22%), Positives = 125/296 (42%), Gaps = 12/296 (4%) Query: 99 LHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSD 158 ++ + + + + L +R Q +FEI D+ + + + Sbjct: 407 VYSSCSIGVTLLQESDIEAAEALRQADLALYRAKEQGRSQYAFFEIEM-DATIKLRKLLE 465 Query: 159 KELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGE 213 L I + P VD + RI+ EA+ + + SP+ + G Sbjct: 466 TGLREAIHVEAI--EVVYQPQVD-HNGRIVGVEALARWSHPQRGPISPAYFVPLAEECGL 522 Query: 214 IYTADLKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQII 273 + DL + + + + ++IN+ L + L + ++ + P I Sbjct: 523 M--MDLGTLIMRRALIDSKRWPGLKVAINVSATQL-RSSRFLPELKDMLRETGVEPRSIE 579 Query: 274 VEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELIT 333 +E TE +++ + +L+ G S+A+D FG G++ L LSR+ D+IKI + ++ Sbjct: 580 IEITEGMLLNDDQPTQNTLNALRQMGFSIALDDFGTGYSSLSYLSRYPVDKIKIDRSFVS 639 Query: 334 NVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 N+ +A+I+AIIK +L + + A GV T + L AG + QG LF+K Sbjct: 640 NLGVDPDAEALIRAIIKLAKALHLSILAEGVETKAQSHILRQAGCAIIQGYLFSKP 695 >UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DA12_LARHH Length = 1041 Score = 303 bits (777), Expect = 6e-81, Method: Composition-based stats. Identities = 58/278 (20%), Positives = 114/278 (41%), Gaps = 12/278 (4%) Query: 120 TYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPI 179 + + ++ + ++ EL + L I H + P Sbjct: 731 LIRNADIAMYQAKARGRNTFQLYTPDM-NAAAAERLQLQGELRNAHLRGEIMLH--YQPQ 787 Query: 180 VDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTAD---LKSKALAFTMAHA 231 +D ++ EA+++ SP + G I T ++ + Sbjct: 788 IDVTDGHVVGCEALMRWKHPTLGMVSPGRFIPLAEESGLIITLGNWAIREACRQAMVWQR 847 Query: 232 LELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEA 291 L +++NL + + + + + + +L P+ + +E TES V+ ++ Sbjct: 848 AGLPPLTVAVNLSGCQF-QQSNFTAVVADALADTSLPPQYLELELTESIVMHDVEQVIAT 906 Query: 292 IKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKC 351 + LKA G+ ++ID FG G++ L L RF D +KI Q + +V AI++AII Sbjct: 907 LTELKALGVQLSIDDFGTGYSSLNYLKRFPVDLLKIDQGFVRDVETDPSDAAIVRAIIAL 966 Query: 352 CTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 L +++ A GV T + +L +AG++ QG F++ Sbjct: 967 GKILNLRLIAEGVETQGQLDYLHAAGVDFIQGYYFSRP 1004 >UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Oxalobacter formigenes RepID=C3X2S2_OXAFO Length = 1049 Score = 303 bits (777), Expect = 6e-81, Method: Composition-based stats. Identities = 64/319 (20%), Positives = 118/319 (36%), Gaps = 19/319 (5%) Query: 84 ARRFGKAGMELFDLRLHERD---DVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQST 140 A R +++ HE + + A++ + F + +R Sbjct: 718 AERLLNIAARQYNIERHEINLTVSIGIAMYPTDGTDFDTLWRSADAAMYRAKQSGRNDYC 777 Query: 141 YFEIPAEDSWLFIADGSDKELDSCALSPTINDHF--AFHPIVDPLSRRIIAFEAIVQKNE 198 +F + ++D+ + F + P + + RI+ FEA+++ Sbjct: 778 FFTTEMQAR-----SARTLQIDNALRRALERNQFSLVYQPQLSLNTNRIVGFEALIRWTH 832 Query: 199 DS-----PSAIAVGQRKDGEIYTAD---LKSKALAFTMAHALELGDKMISINLLPMTLVN 250 P +G+I LK+ + L D IS+NL + Sbjct: 833 PQFGNTPPDEFIPIAESNGQIIPIGEWVLKTAVRQLRLWQDNGLKDVTISVNLSAVQF-R 891 Query: 251 EPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAG 310 P ++ ++ + PE + +E TE + I L+ GI ++ID FG G Sbjct: 892 HPRLPELVMAILEEAGVSPECLQLELTEGVAMENPLAAITVIDELRKKGIRISIDDFGTG 951 Query: 311 FAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEW 370 ++ L L RF +KI + + ++ AI+ A+I SL + A GV T E+ Sbjct: 952 YSSLTYLKRFNVYSLKIDRSFVQDLPNDTEDMAIVSAVISLADSLGMITVAEGVETKEQL 1011 Query: 371 MWLESAGIEMFQGDLFAKA 389 +L S G QG ++ Sbjct: 1012 EFLRSRGCTEIQGYYLSRP 1030 >UniRef50_C6MMM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. M18 RepID=C6MMM5_9DELT Length = 1097 Score = 303 bits (776), Expect = 9e-81, Method: Composition-based stats. Identities = 64/304 (21%), Positives = 118/304 (38%), Gaps = 12/304 (3%) Query: 108 AVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALS 167 +++ K S Q+ + + +R ++ D L +K L Sbjct: 657 SLYPKDGSDAQVLLKNADVAMYRAKQCGRNNFQFYTGDLNDIVLARL-TMEKYLRRALER 715 Query: 168 PTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSK 222 H + P VD LS RI EA+V+ SP++ + G I Sbjct: 716 DEFLVH--YQPKVDLLSGRITGMEALVRWQSPELGFISPASFIPLAEETGLIVAIGEWVL 773 Query: 223 ALAFTMAHALE---LGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTES 279 A A + L ++++NL P + D + + L P I +E ES Sbjct: 774 RTACAQNKAWQDDGLPPMVVAVNLSPRQF-RQEDLADTVHRIAEETGLAPRYIELEVVES 832 Query: 280 EVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSG 339 ++ D + +LK G+ + +D FG G++ L L RF D +KI Q + ++ + Sbjct: 833 LLMDDVDGAVAMLDALKELGVQLTMDDFGTGYSSLSYLKRFPFDMMKIDQSFVRDITRDP 892 Query: 340 PRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAW 399 AI++ +I +L ++V A G+ T + +L + QG F++ Sbjct: 893 GSAAIVRTVISLAHTLNLRVVAEGIETEGQLGYLRGLACDEMQGFYFSRPVPAAEFEQML 952 Query: 400 PEKK 403 +++ Sbjct: 953 RDQR 956 >UniRef50_Q3A1F4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1F4_PELCD Length = 703 Score = 303 bits (776), Expect = 1e-80, Method: Composition-based stats. Identities = 63/284 (22%), Positives = 114/284 (40%), Gaps = 12/284 (4%) Query: 116 KFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFA 175 + + A + + +F + + + L + H Sbjct: 403 DAEALLKNAATAMHQAKQHGSNNFRFF-SKGMNRMAWERIEIETGLRRALDLQQLALH-- 459 Query: 176 FHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTAD---LKSKALAFT 227 + P VD + II EA+++ SP + G I L+S Sbjct: 460 YQPQVDLKTGHIIGMEALLRWESPELGRVSPMRFIPLAEETGLILPIGNWVLESACRQAK 519 Query: 228 MAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDE 287 H +++N+ + + L I+ + + PE + +E TES ++ + DE Sbjct: 520 AWHRAGFPSLRMAVNISARQF-KQAGFIDRLDAIIQRSGINPELLEMELTESLIMEKSDE 578 Query: 288 FAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQA 347 + +K+ GI +AID FG G++ L L F DRIK+ + + ++ ++ AI +A Sbjct: 579 TLMTLVDIKSRGIKLAIDDFGTGYSMLSYLKHFPIDRIKVDRSFVRDIPENTDDAAITEA 638 Query: 348 IIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 II SL+I+V A G+ T E+ +L+ E QG F + Sbjct: 639 IIAMAHSLKIEVIAEGIETREQLAFLKDRACEEGQGYYFGRPVP 682 >UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=12 Tax=Bacteria RepID=A0L2H7_SHESA Length = 1228 Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats. Identities = 63/372 (16%), Positives = 130/372 (34%), Gaps = 19/372 (5%) Query: 30 RNMQSDVTGILLFNGSHFFQLLEGPEEQVKMI----YRAICQDPRHYNIVELLCDYAPAR 85 + V +LL + + + G ++ V + + + D H + ++ R Sbjct: 850 DTLGHHVGDMLLLEVARRLKNIMGNDDIVARLGGDEFVVVLSDTDHDRVAKVAE---ALR 906 Query: 86 RFGKAGMELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIP 145 + + LH + ++F + + + +R +F Sbjct: 907 SGLNQTYLIDNKPLHSSPSIGISLFPTDGDSVEALMKNADMAMYRAKAAGRNNYQFFTAA 966 Query: 146 AEDSWLFIADGSDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS----- 200 ++ + + L + P VD S +++ EA+++ Sbjct: 967 M-NTLVTERQQIETGLRQAI--ACNELLLYYQPQVDISSGQVVGVEALIRWQHPELGLVA 1023 Query: 201 PSAIAVGQRKDGEIYTADLKSKALAFTM---AHALELGDKMISINLLPMTLVNEPDAVSF 257 P + I A +++NL L + V+ Sbjct: 1024 PDRFIPIAEEIDMIIPIGQWVLENALAQLAEWRDKGAKGLRMAVNLSAHQLRKDT-IVAD 1082 Query: 258 LLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLL 317 ++N + + L + +E TES + ++ A+ + L+ GI +AID FG G++ L L Sbjct: 1083 IINVLTKHKLGKGALELEITESVAMQYPEQNAKLLAELRQHGIELAIDDFGTGYSSLSYL 1142 Query: 318 SRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAG 377 DR+K+ + + ++ AI A I L + V A GV + + L G Sbjct: 1143 KLLPLDRLKLDRSFVKDIESDPNDAAISAATISMAHELGLTVVAEGVENEAQLVLLSGMG 1202 Query: 378 IEMFQGDLFAKA 389 ++ QG F+K Sbjct: 1203 CDLVQGYYFSKP 1214 >UniRef50_B0U8J8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Rhizobiales RepID=B0U8J8_METS4 Length = 905 Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats. Identities = 64/278 (23%), Positives = 115/278 (41%), Gaps = 12/278 (4%) Query: 120 TYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPI 179 + ++ +F+ + L I D + P+ Sbjct: 621 LLRSADIALYQAKAAGRGTWRFFDAEMD---LEIQRRRRLAADLRRALDEGQFEVHYQPL 677 Query: 180 VDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTMAHALEL 234 V+ SR + FEA+++ SP+ + G I L + LA A A Sbjct: 678 VEARSRALRGFEALLRWRHPEHGSVSPAVFIPLAEETGLIRP--LGAWVLAQACAEAASW 735 Query: 235 GD-KMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIK 293 + I++NL P+ V + D V+ + + L P ++ +E TES ++ + + Sbjct: 736 PEPLKIAVNLSPVQFV-QGDLVAEVRRVLAETGLGPGRLELEITESVLLQDNEVTLAVLH 794 Query: 294 SLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCT 353 L+ G +++D FG G++ L L F D+IKI Q + N+ + I++A+I Sbjct: 795 ELRTLGALISMDDFGTGYSSLSYLRSFPFDKIKIDQSFVRNLARETDSVEIVRAVIGLGR 854 Query: 354 SLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 +L + V A GV T E+ L G + QG LF++ + Sbjct: 855 ALGMGVLAEGVETTEQLDILRQEGCDELQGYLFSRPRP 892 >UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultured bacterium RepID=Q20JY5_9BACT Length = 874 Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats. Identities = 64/309 (20%), Positives = 121/309 (39%), Gaps = 18/309 (5%) Query: 93 ELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLF 152 + D L+ + +++ + + + + + E + Sbjct: 560 RIKDHELYITVSIGISIYPDDGDDVETLVKNADIAMYAAKEENQGYRFFIE------EMN 613 Query: 153 IADGSDKELDSCALSPTINDHF--AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIA 205 L++ + +D + P+VD + +I+ EA+++ + SPS Sbjct: 614 RKTLERMMLENNLRNALQHDQLIIYYQPLVD-STNQIVGMEALLRWHHPELGLISPSQFI 672 Query: 206 VGQRKDGEIYTAD---LKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEI 262 + G I L+ H + +++NL EPD V + + Sbjct: 673 PLAEETGLIVPIGKWVLRCACQQARKWHEMGYTRFYVAVNLSVRQF-REPDLVETIEQIL 731 Query: 263 KANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQP 322 +A L P+ + +E TES ++ ++ +K L+A GI +ID FG G++ L L RF Sbjct: 732 EATDLPPDCLKLEVTESGIMEHPEQAIAKMKMLRAKGIHFSIDDFGTGYSSLSYLKRFPI 791 Query: 323 DRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQ 382 D +KI + + + + Q II+ II +L + A GV E+ +L G M Q Sbjct: 792 DTLKIDRSFVIDSTTNKDDQEIIKTIIAMARNLGMDTVAEGVEAKEQQDFLIHHGCHMMQ 851 Query: 383 GDLFAKAKL 391 G F + Sbjct: 852 GYYFGRPMP 860 >UniRef50_B9QZL6 Cyclic diguanylate phosphodiesterase domain protein n=2 Tax=Labrenzia RepID=B9QZL6_9RHOB Length = 759 Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats. Identities = 70/297 (23%), Positives = 136/297 (45%), Gaps = 11/297 (3%) Query: 98 RLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGS 157 LH + +V + + + + ++FE ED + D Sbjct: 435 ELHASLSIGASVAPRDGIDPDELLRKADIALYDAKENGRNRRSFFEANMEDH-VQSKDKL 493 Query: 158 DKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDG 212 +EL + + A+ P D ++RI++ EA+ + ++ SP+ + G Sbjct: 494 SRELRMALKNDELT--LAYQPQSDTAAQRIVSVEALARWTKEDGTVVSPAQFIPVAEETG 551 Query: 213 EIYTADLKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQI 272 I L L A A + D ++S+N+ P + P V ++ + N L P+++ Sbjct: 552 LINELGL--WVLNKACAKAHDWPDVVMSVNVSPNQFKH-PRFVEKVMAILATNNLAPQRL 608 Query: 273 IVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELI 332 +E TES R D ++++ LK GI VA+D FG+G++ L L RF D +K+ ++ + Sbjct: 609 EIEVTESVFAGRNDTVLKSLRRLKNLGIKVALDDFGSGYSSLSYLRRFPFDTLKVDRDFL 668 Query: 333 TNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 +++ + +AII +II+ +L + + A G+ T E+ +L++ G QG ++ Sbjct: 669 SDMDGNPEAEAIIVSIIQLGKALGMTIVAEGIETIEQIRFLQAHGCHRMQGYFISQP 725 >UniRef50_C4ZM39 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZM39_THASP Length = 920 Score = 302 bits (773), Expect = 2e-80, Method: Composition-based stats. Identities = 73/302 (24%), Positives = 129/302 (42%), Gaps = 20/302 (6%) Query: 108 AVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDK-ELDSCAL 166 ++F G S + + +R + +F + + D + E Sbjct: 622 SLFHDGVSSLESLLKQAEVALYRAKQDGRDIVRFFNPEMQ----AVVDAHARLEARMHEA 677 Query: 167 SPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKS 221 F P V+ +I EA+++ D SP+ G I L Sbjct: 678 LEANAFRLFFQPQVN-RRGVVIGAEALLRWPLDGGAMVSPAEFIPLAEDTGHIVRLGLWV 736 Query: 222 KALAFTMAHALELGD----KMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFT 277 A ++ + I++N+ ++PD V+ + + ++A A+ P ++ +E T Sbjct: 737 LRSACAQLARWQMNEGTRHLKIAVNVSARQF-HQPDFVASVKDSVRAAAIDPCRLELELT 795 Query: 278 ESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHK 337 ES ++S DE + L+A GI A+D FG G++ L L R D++KI Q + ++ + Sbjct: 796 ESAILSDVDETIRRMNELRALGIRFALDDFGTGYSSLSYLKRLPFDQLKIDQSFVRDMAE 855 Query: 338 SGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSI 397 +AI+ AI+ +L ++V A GV PE+ +L G + FQG LF K +P Sbjct: 856 DESSEAIVLAILSLSHALGLEVVAEGVEMPEQRDFLRQHGCDSFQGYLFGKP----LPME 911 Query: 398 AW 399 AW Sbjct: 912 AW 913 >UniRef50_C7CCD7 Putative diguanylate cyclase (GGDEF) /phosphodiesterase (EAL), with GAF and two PAS/PAC sensor domains n=1 Tax=Methylobacterium extorquens DM4 RepID=C7CCD7_METED Length = 1028 Score = 302 bits (773), Expect = 2e-80, Method: Composition-based stats. Identities = 64/280 (22%), Positives = 120/280 (42%), Gaps = 13/280 (4%) Query: 116 KFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFA 175 + + + L +R A ++E D+ + + E+ + H Sbjct: 719 TSETLFKNADLALYRAKASARNTYCFYE-AGMDAAVEARMQLEFEMREAITCGSFALH-- 775 Query: 176 FHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTMAH 230 + P++ RI+ FEA+++ +P + G I L S AL Sbjct: 776 YQPVLRLADHRIVGFEALMRWPHPKRGMIAPDEFIPSAEETGLIVP--LGSWALQEACRE 833 Query: 231 ALELGDK-MISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFA 289 A D I++N+ + +P +++ + A+ L P ++++E TES ++ + Sbjct: 834 AASWPDHLRIAVNVSAVQF-QQPGLEQGVMSALAASGLAPHRLVLEVTESVLVQDAEAVI 892 Query: 290 EAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAII 349 + LK+ G+ +A+D FG G++ L L RF DRIKI + I+ + AI++A++ Sbjct: 893 ACLHRLKSLGVRIALDDFGTGYSSLSYLRRFPFDRIKIDRSFISEIG-DPGAAAIVRAVV 951 Query: 350 KCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 L V+A GV T + + S G QG L ++ Sbjct: 952 GIAMQLGATVTAEGVETTAQLEQVRSEGCMEVQGYLVSRP 991 >UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L724_9DELT Length = 827 Score = 302 bits (773), Expect = 2e-80, Method: Composition-based stats. Identities = 69/280 (24%), Positives = 114/280 (40%), Gaps = 15/280 (5%) Query: 120 TYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPI 179 D + +R S F+ + A + +L + + H + PI Sbjct: 537 LLRDADIAMYRAK-EQGRASMIFDRKMHQ-EILEAISLETDLRQALEAGELLLH--YQPI 592 Query: 180 VDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTA-----DLKSKALAFTMA 229 VD RI+ FEA+V+ + P + G I D + L Sbjct: 593 VDVKDSRIVGFEALVRWDHPDRGLVPPGQFIPLAEETGLILPLGRFVIDEACRQLRAWQL 652 Query: 230 HALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFA 289 E D +S+N+ V + V + + A L P + +E TES ++ + A Sbjct: 653 EMPEAADLSVSVNVSCRQFVKD-GLVEHVAQVLAATGLPPACLKLEITESVLMHDAEHTA 711 Query: 290 EAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAII 349 + LKA G+ +AID FG G++ L L + D +KI + I+ G Q I+++II Sbjct: 712 RELNRLKALGVKIAIDDFGTGYSSLSYLRQLPIDHLKIDRSFISGQGCDGESQEIVKSII 771 Query: 350 KCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 SL + V A GV P++ L A + QG +F++ Sbjct: 772 SLARSLGLTVIAEGVECPDQLDRLRLADCDKAQGFMFSRP 811 >UniRef50_Q07VI3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=10 Tax=Bradyrhizobiaceae RepID=Q07VI3_RHOP5 Length = 750 Score = 301 bits (772), Expect = 3e-80, Method: Composition-based stats. Identities = 69/283 (24%), Positives = 125/283 (44%), Gaps = 10/283 (3%) Query: 116 KFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFA 175 + + + + A ++FE D+ + EL + H Sbjct: 448 DSEKLFMSADMALSKAKNEARGSYSFFEPGM-DARAQTRRKIEFELRQAIQHDVLRPH-- 504 Query: 176 FHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTMAH 230 + P++ S RI EA+V+ SP+ + G I + A A Sbjct: 505 YQPLIGLNSGRITGCEALVRWPHPERGLVSPAEFIPVAEETGLINPLGTQVLRRACLDAA 564 Query: 231 ALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAE 290 A D I+INL P+ + +S +++ +K + L P+++ +E TE+ ++ + + Sbjct: 565 AWP-DDVRIAINLSPLQF-RVGNLLSVVMDALKQSGLSPKRLELEITETLLLEKSSQVIA 622 Query: 291 AIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIK 350 + +L+A G +++D FG G++ L L F D+IKI Q + V + QAI+++II Sbjct: 623 TLHALRALGARISMDDFGTGYSSLSYLRSFPFDKIKIDQSFVRGVCDNRELQAIVRSIIS 682 Query: 351 CCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNG 393 L + ++A GV T E WL + G QG LF+ A+ + Sbjct: 683 LGMGLGVTITAEGVETEAELNWLRAEGCHEAQGFLFSPARPDA 725 >UniRef50_Q1YLJ5 Possible signaling protein with EAL domain n=2 Tax=Aurantimonadaceae RepID=Q1YLJ5_MOBAS Length = 828 Score = 301 bits (772), Expect = 3e-80, Method: Composition-based stats. Identities = 66/284 (23%), Positives = 121/284 (42%), Gaps = 15/284 (5%) Query: 115 SKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF 174 + + L ++ A F+ +EL+ F Sbjct: 516 LDAAIALQNCDLALYQAKQSAGSSYRMFQPSMRQKL-----QQRRELEIDLQKAIEEGQF 570 Query: 175 A--FHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFT 227 + P VD R I FEA+++ N SPS + G I L + A Sbjct: 571 ELFYQPFVDTGRRAISGFEALLRWNHPERGRVSPSTFIPLAEETGMITPIGLWALETACE 630 Query: 228 MAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDE 287 A + D IS+NL + + P V+ + + + L P ++ +E TES + D+ Sbjct: 631 QASNW-VSDLAISVNLSAVQFKS-PTLVADVRRVLAKSGLQPSRLQIEVTESLFLDEGDK 688 Query: 288 FAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQA 347 + + G+++++D FG G++ L L+RF D+IKI Q + ++ + AI+++ Sbjct: 689 VLSILTEFRRMGLTISMDDFGTGYSSLGYLNRFPFDKIKIDQSFVRDMSR-PENIAIVRS 747 Query: 348 IIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 +I +L+++V A G+ TPE+ L + G QG F++ + Sbjct: 748 VIGLSNALDMRVIAEGIETPEQMRILYAEGCREMQGYYFSRPRP 791 >UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=Q39X25_GEOMG Length = 633 Score = 301 bits (772), Expect = 3e-80, Method: Composition-based stats. Identities = 57/282 (20%), Positives = 101/282 (35%), Gaps = 16/282 (5%) Query: 120 TYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFA--FH 177 + + +R F L++ D F + Sbjct: 336 LVKNADVAMYRAKEQGRNNCQLFAPEMNARAF-----ERLSLENDMRRALERDEFVLHYQ 390 Query: 178 PIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTAD---LKSKALAFTMA 229 P V+ +I EA+V+ S PS + G I L++ Sbjct: 391 PKVNVEHGQIACMEALVRWQHPSMGLVPPSRFIPLAEETGLIVPLGEWVLRTACQQNRAW 450 Query: 230 HALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFA 289 +++NL P L + D + + L P +++E TES ++ +E Sbjct: 451 QDAGYPTMQVAVNLSPRQL-RQGDLSETVARVLAETGLAPGWLVIEVTESILMDDAEETI 509 Query: 290 EAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAII 349 + L G+ ++ID FG G++ L L +F +KI + + + + +AI A+I Sbjct: 510 RTFRRLDRMGVRISIDDFGTGYSSLHYLKKFPVHTLKIDRSFVREIASNPDDEAIAGAVI 569 Query: 350 KCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 L + V A GV T E+ L + QG LF++ Sbjct: 570 SMAKGLNLGVVAEGVETVEQMEVLRALNCRYMQGFLFSEPAP 611 >UniRef50_B0CAC5 Diguanylate cyclase/phosphodiesterase n=7 Tax=cellular organisms RepID=B0CAC5_ACAM1 Length = 901 Score = 301 bits (771), Expect = 4e-80, Method: Composition-based stats. Identities = 68/308 (22%), Positives = 129/308 (41%), Gaps = 21/308 (6%) Query: 95 FDLRLHE---RDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWL 151 F +R HE + A++ + + ++ + + +R+ + Sbjct: 561 FVIRRHELFVTTSIGIAIYPEDGQEAEILLQNADVALYRSKEQGRGTCQLYNPTMNAKEQ 620 Query: 152 FIADGSDKELDSCALSPTINDHF--AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAI 204 FI L++ D F + P V+ + I+ EA+V+ SP+ Sbjct: 621 FI-------LENSLRHALDRDEFILHYQPKVNICTGEIVGLEALVRWEHPEMGLVSPATF 673 Query: 205 AVGQRKDGEIYTAD---LKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNE 261 + G I L++ + H L L ++INL +P+ V + Sbjct: 674 IPIAEETGLIVELGEWVLRTACQQAVLWHKLGLAPLSVAINLSARQFY-QPNLVEIVAQV 732 Query: 262 IKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQ 321 I++ L P+Q+ +E TE+ + + + +L+A G+ +A+D FG G++ L L + Sbjct: 733 IESTGLNPQQLELEITETIAVKNMEFAKSILCNLQALGVHIAMDDFGTGYSSLNYLKQLP 792 Query: 322 PDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMF 381 + +KI Q I ++ + II A+I L+++V A GV E+ L S E+ Sbjct: 793 FNTLKIDQSFIQDLKPASKDVEIINAVIALGKGLDLKVVAEGVDNEEQLELLRSLNCEIV 852 Query: 382 QGDLFAKA 389 QG LF++ Sbjct: 853 QGYLFSRP 860 >UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Clostridium thermocellum RepID=A3DCG7_CLOTH Length = 862 Score = 300 bits (769), Expect = 6e-80, Method: Composition-based stats. Identities = 61/305 (20%), Positives = 113/305 (37%), Gaps = 16/305 (5%) Query: 109 VFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSP 168 ++ G Q + + +R L + L D +++ Sbjct: 554 IYPNGGEDPQTIFKNADTALYRAKELGRNNYQLYTESMNQKVLQRLD-----IENSLRRA 608 Query: 169 TINDHFA--FHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKS 221 + F + P +D + +I+ FEA+++ P G I Sbjct: 609 IEKEEFVLFYQPQIDIKTGKIVGFEALLRWYHPDYGLMPPMEFIPVAEDSGLIVVIGEWV 668 Query: 222 KALAFTM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTE 278 A L +IS+NL + V + + L PE + +E TE Sbjct: 669 LETACRQNKKWIECGLEPHLISVNLSARQFQR-SNIVEVIDRIRSSTGLAPELLELEITE 727 Query: 279 SEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKS 338 S + + + L+ GI V++D FG G++ L L + D +KI + + ++ + Sbjct: 728 STAMQDLSFTIDVLNQLRKKGIRVSLDDFGTGYSSLNYLRQLPIDTLKIDKSFVQDIRAN 787 Query: 339 GPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIA 398 +AI + +I L++ V A GV T E+ ++L+ + QG LF+K Sbjct: 788 SKEEAIAKTVISLAHKLDLTVVAEGVETKEQLLFLKKEKCDKAQGYLFSKPLPAEEIEKM 847 Query: 399 WPEKK 403 +KK Sbjct: 848 LRDKK 852 >UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZ79_9PROT Length = 923 Score = 300 bits (769), Expect = 6e-80, Method: Composition-based stats. Identities = 55/301 (18%), Positives = 116/301 (38%), Gaps = 12/301 (3%) Query: 99 LHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSD 158 + + + +++ + + +R +F + + + + Sbjct: 612 ISTQASIGISIYPDQAQDADTLIKNADMAMYRAKEEGRNNFQFFVPEM-NFRVDLLFSME 670 Query: 159 KELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGE 213 K+L + + P D S + EA+++ + SP+ + G+ Sbjct: 671 KDLRLALERGEL--FLQYQPQADLASGTLSGVEALIRWDHPVKGQVSPAEFIPVAEETGQ 728 Query: 214 IYTAD---LKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPE 270 I L++ + D I++NL L +PD + + + L Sbjct: 729 IVAIGEWVLRTACSQMAEWRKTGMHDLTIAVNLSIRQL-RQPDLAELIKSVLLETGLDAR 787 Query: 271 QIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQE 330 + +E TE ++ + ++ G+ ++ID FG GF+ L L + +++KI Q Sbjct: 788 HLELEITEGIMMGDNQAAFRFLSEMQDLGVQLSIDDFGTGFSSLNYLKQMPVNKLKIDQS 847 Query: 331 LITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 I ++ AII++II L ++V A GV T E+ +L G + QG +++ Sbjct: 848 FIRDIETDEGDAAIIRSIISLGHRLNLRVIAEGVETQEQLDFLRIRGCDEIQGYFYSRPL 907 Query: 391 L 391 L Sbjct: 908 L 908 >UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A628_PELCD Length = 1063 Score = 300 bits (769), Expect = 6e-80, Method: Composition-based stats. Identities = 65/293 (22%), Positives = 110/293 (37%), Gaps = 13/293 (4%) Query: 118 QLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFH 177 + + +F + + + L S + + Sbjct: 766 ETLLKRADTAMYEAKKNGRNGYHFFSLQLAEQAERRHR-MEINLRSALKEGEM--QLVYQ 822 Query: 178 PIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTM---A 229 P +D RI EA+++ SP+ + G IY A Sbjct: 823 PQIDLGKVRITGMEALLRWQSPEEGTISPARFIPLAEETGLIYPLGEWVLQQACRQGAIW 882 Query: 230 HALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFA 289 E +++NL ++PD + ++ L P + +E TES + + Sbjct: 883 QKTEASPLCVAVNLSAKQF-HQPDLAKNIKKILRETGLSPHLLELEITESVFLENMEAAI 941 Query: 290 EAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAII 349 EA+ LK G+ +ID FG G++ L L + DRIKI+QE + ++ +AII+A I Sbjct: 942 EALTELKKLGVQFSIDDFGTGYSSLSYLKKLPIDRIKIAQEFVRDIDTDDGDKAIIKATI 1001 Query: 350 KCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL-NGIPSIAWPE 401 SL +++ A GV ++ +L G QG FAK +PS E Sbjct: 1002 AMAKSLGMKLIAEGVENHQQLAFLLLHGCHAMQGYYFAKPMPAQEVPSFIHSE 1054 >UniRef50_Q2J3Q8 Diguanylate cyclase/phosphodiesterase with GAF sensor n=2 Tax=Rhodopseudomonas palustris RepID=Q2J3Q8_RHOP2 Length = 743 Score = 300 bits (768), Expect = 7e-80, Method: Composition-based stats. Identities = 70/285 (24%), Positives = 119/285 (41%), Gaps = 16/285 (5%) Query: 115 SKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF 174 + + L +R FE +D + ++L+ +N F Sbjct: 448 TDSDELIKNADLALYRAKAAGRNGYVTFETAMKDRA-----NARQQLEGELRQAILNREF 502 Query: 175 --AFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFT 227 + P V+ S R+I EA+++ PS + G I L L Sbjct: 503 DLYYQPQVEARSGRVIGAEALLRWRHPRRGFVPPSEFIPVAEETGLIEK--LGEWVLKEA 560 Query: 228 MAHALELG-DKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFD 286 A A+ ++INL P+ L + + + ++ + L PE++ VE TE+ + Sbjct: 561 AAEAIRWPAPIKLAINLSPVQL-SRGNLTDTVTQALRLSGLPPERLEVEITENVFLEDEV 619 Query: 287 EFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQ 346 I+ L++ G+SVA+D FG G++ L L+RF D+IKI + N+ + I+ Sbjct: 620 NNLAVIRQLRSLGVSVALDDFGTGYSSLSYLTRFPFDQIKIDKFFSMNLIERSDCATIVS 679 Query: 347 AIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 ++I L I A GV T ++ L AG++ FQG LF Sbjct: 680 SVITLARGLGISTVAEGVETVRQFELLREAGVDYFQGYLFGHPVP 724 >UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3L4_9PROT Length = 900 Score = 300 bits (768), Expect = 7e-80, Method: Composition-based stats. Identities = 73/361 (20%), Positives = 129/361 (35%), Gaps = 30/361 (8%) Query: 42 FNGSHFFQLLEGPEEQVKMIYRAICQDPRHYNIVELLCDYAPARRFGKAGMELFDLRLHE 101 F G F LLEG +E D +A R+ G H Sbjct: 538 FGGDEFVVLLEGFDENPL--------DAASQAETVGEQIFAALRQPYLIGTH----EYHG 585 Query: 102 RDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKEL 161 + +F+ + ++ +F+ +++ L Sbjct: 586 TSSIGATLFNDKQQSIDELMKQADIAMYQAKKEGRNVLRFFDPQMQET-----IAKRTAL 640 Query: 162 DSCALSPTINDHF--AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEI 214 + N F + VD SR EA+++ SP + I Sbjct: 641 EGDLRKAIENHQFQLHYQIQVD-ESRHPFGAEALIRWFHPEHGMVSPDQFIPLAEESDLI 699 Query: 215 YTADLKSKALAFTMAHALE----LGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPE 270 A + ++S+N+ + D V+ + + I+ + P Sbjct: 700 LPIGYWVLETACARIQRWQHDAKTSGFVLSVNVSAKQF-RQTDFVNQVQSLIQQYEINPS 758 Query: 271 QIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQE 330 + +E TES ++ ++ + +LK G+ ++D FG G++ L L R D++KI Q Sbjct: 759 LLKLELTESMLLDNIEDTIATMSALKELGVKFSLDDFGTGYSSLQYLKRLPLDQLKIDQS 818 Query: 331 LITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 + ++ +AI++ II SL++ V A GV T E+ L S G + FQG LF K Sbjct: 819 FVRDIAVDASDRAIVRTIIAMAHSLDLDVIAEGVETEEQQKHLSSKGCKNFQGYLFGKPV 878 Query: 391 L 391 Sbjct: 879 P 879 >UniRef50_B7KRA3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Alphaproteobacteria RepID=B7KRA3_METC4 Length = 954 Score = 300 bits (768), Expect = 8e-80, Method: Composition-based stats. Identities = 68/288 (23%), Positives = 120/288 (41%), Gaps = 15/288 (5%) Query: 113 GTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTIND 172 GTS +L L +R +F D + + + L+S N Sbjct: 661 GTSPEKL-LKSADLALYRAKATGRGCWAFF-----DEEMDVELRKRRALESDLKKAVGNG 714 Query: 173 HF--AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALA 225 F F PIV +RI + EA+++ SP+ + G I A Sbjct: 715 EFELVFQPIVKLDRQRIASCEALLRWRHPERGYVSPADFIPLAEETGTIGEIGEWVLRKA 774 Query: 226 FTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 + A + +++N+ N V +++ + A+ L ++ +E TES +++ Sbjct: 775 CSEAATWP-SNIRVAVNVSAAQFKN-AAVVRAVMDALAASGLPAHRLELEITESVLLNDS 832 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 + +LK G+ VA+D FG GF+ L L F D+IKI Q + N+ G + I+ Sbjct: 833 VTTLATLHTLKRLGVRVAMDDFGTGFSSLSYLQSFPFDKIKIDQSFVRNLAAPGNSRLIV 892 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNG 393 ++++ SL I +A G+ T + L G + QG LF++ + Sbjct: 893 RSVVGLGRSLGITTTAEGIETEAQLEQLRLEGCDEGQGYLFSRPVPSA 940 >UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T1A8_JANMA Length = 910 Score = 300 bits (768), Expect = 8e-80, Method: Composition-based stats. Identities = 59/281 (20%), Positives = 110/281 (39%), Gaps = 12/281 (4%) Query: 120 TYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPI 179 + +R+ L ++ D L + EL + H + P Sbjct: 617 LLAHADVAMYRSKELGRNNFQFYTPAMNDQALERLR-IEGELRHAIELNELVLH--YQPQ 673 Query: 180 VDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTMAHALE- 233 VD + I+ EA+V+ N P + + G I A A A + Sbjct: 674 VDLHTGAIVGLEALVRWNHPILGMVQPGSFISLAEETGLIIPIGAWVLQTACRQAKAWQD 733 Query: 234 --LGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEA 291 I++NL + + + + ++ L + +E TES V++ + Sbjct: 734 MGFTQLRIAVNLSARQFT-QASLLESIKDTLQETGLEARFLEIELTESSVMADIERNILT 792 Query: 292 IKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKC 351 ++ LK+ G+ +++D FG G + L L RF D +KI + + ++ + +I+ +II Sbjct: 793 LRDLKSLGVQLSVDDFGTGHSSLAYLKRFPIDTLKIDRSFVRDIAINQDDASIVSSIISL 852 Query: 352 CTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLN 392 +L++ V A GV T + L + G QG F K + Sbjct: 853 AHNLKLNVIAEGVETASQMDILRAQGCNEIQGYYFCKPLPS 893 >UniRef50_C3KBD8 Putative sensory box GGDEF/EAL domain protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3KBD8_PSEFS Length = 409 Score = 300 bits (768), Expect = 9e-80, Method: Composition-based stats. Identities = 65/276 (23%), Positives = 115/276 (41%), Gaps = 11/276 (3%) Query: 124 RALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF--AFHPIVD 181 R R S E+ + + + D + ++L++ + F + P V+ Sbjct: 118 RVRNLLRLKTRGDWVSHSRELAQRPTGMNVHDLARQDLENALRQAVEHHEFTLHYQPKVE 177 Query: 182 PLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSK---ALAFTMAHALE 233 S R+ A EA+++ SP+ G I Sbjct: 178 VASGRLCALEALLRWERPDYGAVSPAVFVPILESLGLIVPVGRWVIEQVCRQIAEWQQGP 237 Query: 234 LGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIK 293 +G +S+N+ L+ E D ++ + +K N + P + VE TE ++ +++ Sbjct: 238 IGPVEVSVNVSGHQLI-EGDLIADIARLLKQNQVEPHWLEVELTEGSLMENTQHTIASLQ 296 Query: 294 SLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCT 353 L G+ ++ID FG G++ L L RF D +KI I V + AI + II+ Sbjct: 297 RLHTMGVKISIDDFGTGYSSLAYLRRFPIDTLKIDIAFIREVTSNPQDAAITRTIIELAH 356 Query: 354 SLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 SL ++V A GV T + +L+ AG + QG LF++ Sbjct: 357 SLNLRVVAEGVETQAQLAFLKEAGCDQIQGYLFSRP 392 >UniRef50_B1M4V3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Rhizobiales RepID=B1M4V3_METRJ Length = 777 Score = 299 bits (767), Expect = 9e-80, Method: Composition-based stats. Identities = 67/279 (24%), Positives = 112/279 (40%), Gaps = 14/279 (5%) Query: 118 QLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFA-- 175 Q L +R ++E ++ + + L + D F Sbjct: 483 QEIMRRADLALYRMKSEGRNGYRFYEAEMDER-----IEARRALTADLRGALDRDEFVLY 537 Query: 176 FHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTMAH 230 F PIV R+ FEA+++ SP + G I A +A Sbjct: 538 FQPIVAAKECRVRGFEALIRWKHPVRGFVSPGEFIPLAEETGVIIPLGEWILREACRIAA 597 Query: 231 ALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAE 290 GD I++NL P D + + ++ + L ++ +E TES + Sbjct: 598 GWP-GDVRIAVNLSPRQF-RHSDLTQLVRSALRTSGLAAARLELEVTESVFLEATPAINA 655 Query: 291 AIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIK 350 + L+ G+ +++D FG G++ L L R D+IKI Q + ++ + AI+ AII Sbjct: 656 TLSKLREMGVRLSLDDFGTGYSSLSYLRRIAFDKIKIDQSFVRDLPQERGAAAIVSAIID 715 Query: 351 CCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 TSL++ ++A GV T + L G FQG LF+K Sbjct: 716 MATSLDMTITAEGVETDAQRACLLEQGCHEFQGYLFSKP 754 >UniRef50_B0UQT2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Methylobacterium RepID=B0UQT2_METS4 Length = 797 Score = 299 bits (766), Expect = 1e-79, Method: Composition-based stats. Identities = 56/279 (20%), Positives = 106/279 (37%), Gaps = 10/279 (3%) Query: 118 QLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFH 177 + L + + FE ++ + + +L F Sbjct: 508 EQLLRSADLALYGAKEEGRGRFRMFEGTM-NARMQARRSLELDLRRALARQ--EFELYFQ 564 Query: 178 PIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTMAHAL 232 P VD + R EA+++ + SP + G I A A Sbjct: 565 PQVDARTGRFDGAEALIRWHHPERGLVSPGEFIPLAEETGLIGPLGEWVLRTACAEARRW 624 Query: 233 ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAI 292 +++NL P+ +P + + + L ++ +E TE ++ + Sbjct: 625 ATP-LPVAVNLSPVQF-RDPRLAATVRGILAETGLPGSRLEIEITEGTLMQDEHRTLAVL 682 Query: 293 KSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCC 352 L+ GI +++D FG G++ L L RF D+IKI Q + + AI++AI Sbjct: 683 TELRGLGIRISMDDFGTGYSSLSYLRRFPFDKIKIDQSFVRQTPQDRDSVAIVRAIAMLG 742 Query: 353 TSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 SL I+ +A GV T ++ +++ G + QG L+++ Sbjct: 743 RSLGIKTTAEGVETDQQSVFIAGEGCDQLQGYLYSRPVP 781 >UniRef50_Q3JCS1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Nitrosococcus oceani RepID=Q3JCS1_NITOC Length = 571 Score = 299 bits (766), Expect = 1e-79, Method: Composition-based stats. Identities = 68/313 (21%), Positives = 117/313 (37%), Gaps = 12/313 (3%) Query: 98 RLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGS 157 +H + +F K + + + + + PA ++ Sbjct: 257 EIHNSASIGITLFPNDGDKAEQLLKNADIAMYHAKHEGQNNYQLY-TPAINARAHPRMAL 315 Query: 158 DKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDSPSA-----IAVGQRKDG 212 KEL T N + F P ++ + R FEA+++ + G Sbjct: 316 AKELQRAF--ETDNLYLQFQPQLNLATHRTSGFEALLRWRHPQHGMLARQTFIRLAEETG 373 Query: 213 EIYTADLKSKALAFTM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVP 269 I + A L G +++NL P +PD + ++ L P Sbjct: 374 LIVPIGAWALETACQTCMGWRQLRAGPLRVAVNLSPRQF-RQPDLAGSIATILEKTGLAP 432 Query: 270 EQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQ 329 + +E TE ++ D ++SL G+ V++D FG G A L L D IKI + Sbjct: 433 SALEIEVTEGLLLEDMDSAFNTLQSLSILGVHVSVDDFGTGHASLSYLKNLPFDSIKIDR 492 Query: 330 ELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 I + + I +A+I SL ++V A GV TPE+ ++L+ G ++ QG +K Sbjct: 493 SFIHGIPADSESRTITKAVIALGHSLNLKVVAEGVETPEQLLYLQKQGCDLVQGYFISKP 552 Query: 390 KLNGIPSIAWPEK 402 W EK Sbjct: 553 LDVPEAQRWWEEK 565 >UniRef50_A1TLA7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Acidovorax RepID=A1TLA7_ACIAC Length = 850 Score = 298 bits (765), Expect = 2e-79, Method: Composition-based stats. Identities = 63/284 (22%), Positives = 116/284 (40%), Gaps = 14/284 (4%) Query: 120 TYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPI 179 L ++ +F+ + L A + EL S + H + P+ Sbjct: 563 LLKHADLAMYQAKAAGRNTIRFFDPSMLQAVLARA-ALESELRLALESDELLLH--YQPL 619 Query: 180 VDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTMAHALEL 234 V+ ++ EA+V+ P + G I A A Sbjct: 620 VN-GDGSMLGAEALVRWRHPQRGLVMPGEFIPAAEQGGLIVALGQWVLERACAQLVAWSR 678 Query: 235 G----DKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAE 290 ++++N+ +PD V LL ++ + P + +E TES +++ ++ Sbjct: 679 SAATAQLVLAVNVSVRQF-RQPDFVDQLLQTLRRSGAQPRLLKIELTESLLMADVEDVIA 737 Query: 291 AIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIK 350 ++ L+A G+ AID FG G++ L L R D++KI Q + +V AI++ I+ Sbjct: 738 RMEQLRAHGVGFAIDDFGTGYSSLAYLKRLPLDQLKIDQSFVRDVLTDPNDAAIVRTILA 797 Query: 351 CCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGI 394 SL+++V A GV T + +L+ G + FQG LF + + Sbjct: 798 LARSLDLEVVAEGVETTGQLKFLQRHGCKAFQGHLFGRPAPAAV 841 >UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G4R7_HERAR Length = 859 Score = 298 bits (765), Expect = 2e-79, Method: Composition-based stats. Identities = 60/300 (20%), Positives = 115/300 (38%), Gaps = 12/300 (4%) Query: 98 RLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGS 157 L+ + AV+ F+ + + +R F ++ Sbjct: 548 ELNVMASIGIAVYPADGMDFETLCKNADVAMYRAKQEGRNAYRSFTQEM-QAYSTRYLQV 606 Query: 158 DKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDG 212 L ++ H + P + +S +I EA+++ + SP+ + G Sbjct: 607 LNALRQAIAQEQLHVH--YQPQISLISGDVIGAEALLRWHHPELGNISPAEFIPIAEESG 664 Query: 213 EIYTAD---LKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVP 269 I L+ H L L +I++NL + + ++ +K P Sbjct: 665 LILQIGEWVLRVAVAQAKKWHQLGLDKLIIAVNLSAVQF-RHAGLPNLVMQILKEEDFPP 723 Query: 270 EQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQ 329 + + +E TE + + SL G+ ++ID FG G++ L L +F+ ++KI Q Sbjct: 724 QYLELELTEGVAMHDPQGAIAMMNSLHERGVRMSIDDFGTGYSSLSYLKQFKAYKLKIDQ 783 Query: 330 ELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 + ++ +AI+ AII +L +Q A GV T E+ +L G QG ++K Sbjct: 784 SFVRDISTDAEDKAIVSAIIGMAKNLGLQTIAEGVETAEQQAFLREEGCHEAQGYHYSKP 843 >UniRef50_C5CTK8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Variovorax paradoxus S110 RepID=C5CTK8_VARPS Length = 1107 Score = 298 bits (765), Expect = 2e-79, Method: Composition-based stats. Identities = 57/302 (18%), Positives = 120/302 (39%), Gaps = 12/302 (3%) Query: 98 RLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGS 157 LH V +++ + + + +R ++ ++ Sbjct: 788 ELHVSASVGVSIYPDNGADAEALLKNADTAMYRAKERGRNTFRFYAAKM-NAQNTEQLML 846 Query: 158 DKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDG 212 + L + H + P +D ++RI+ EA+++ + P + G Sbjct: 847 ESALRHALERGELEMH--YQPKMDLQTQRIVGVEALMRWHHPILGMIPPVQFIPIAEELG 904 Query: 213 EIYTADLKSKALAFT---MAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVP 269 I + + A L ++S+NL P + ++ + ++A+ L P Sbjct: 905 LIVSLGKWALERACADSRSWQKYGLPKVLMSVNLSPRQFESRT-LIADIQAVLEASGLEP 963 Query: 270 EQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQ 329 + +E TE V++ + A+ +++++ G+ +AID FG G++ L L F +KI + Sbjct: 964 SLLELEITEGAVMANPEHAAKLLRAIRDMGVGLAIDDFGTGYSSLSYLKHFPLSTVKIDR 1023 Query: 330 ELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 I ++ + +A+I II L ++V A G+ T + +L S G + QG K Sbjct: 1024 SFINDLSQDADARALIDGIITLAHGLRMKVVAEGIETTAQLDYLRSHGCDEAQGYWLCKP 1083 Query: 390 KL 391 Sbjct: 1084 VP 1085 >UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1T5E1_9BURK Length = 1055 Score = 298 bits (765), Expect = 2e-79, Method: Composition-based stats. Identities = 67/293 (22%), Positives = 124/293 (42%), Gaps = 16/293 (5%) Query: 107 QAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCAL 166 ++F + + + +R + +++ + + G+ L+ Sbjct: 748 ASLFPQDGDDAETLMKKADVAMYRAKDMGRNTFQFYQPE-----MNASAGARLNLERRLR 802 Query: 167 SPTINDHF--AFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYT--- 216 ++ F + P VD +S +I+ EA+V+ ++ PS+ + G I Sbjct: 803 RALRDNEFLLHYQPQVDIVSGQIVGIEALVRWHDPEAGLVPPSSFIPLAEESGLIGPLSE 862 Query: 217 ADLKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEF 276 L+ L +S+NL + + + ++ + L P + +E Sbjct: 863 WVLREACRQNKAWQDQGLPPARVSVNLSAR-VFQQRNIAKLVMQVLAETGLEPRYLELEL 921 Query: 277 TESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVH 336 TES ++ +E + L A GI +AID FG G++ L L RF DR+KI + ++++ Sbjct: 922 TESTIMRNAEEAVLMLNELHALGIGLAIDDFGTGYSSLSYLKRFPVDRLKIDRSFVSDIG 981 Query: 337 KSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 SG + I AII SL++QV A GV T + +L+ + QG FAK Sbjct: 982 VSGDDETITSAIIALAHSLKLQVIAEGVETSAQLDFLKERACDEMQGFYFAKP 1034 >UniRef50_C8QI00 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Enterobacteriaceae RepID=C8QI00_9ENTR Length = 949 Score = 298 bits (765), Expect = 2e-79, Method: Composition-based stats. Identities = 68/278 (24%), Positives = 128/278 (46%), Gaps = 14/278 (5%) Query: 124 RALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF--AFHPIVD 181 + + + +F + +D S + +++ + PI D Sbjct: 673 ADMALYEAKRNGRNRYEHFTLEMDDLAR-----SRRVIENDLRDAISGRQLKLYYQPITD 727 Query: 182 PLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTMAHALELGD 236 + II +EA+++ + P+ + G I+ + A A + E G+ Sbjct: 728 GNEKGIIGYEALMRWHHPIKGLIMPNDFIPIAEETGLIHLLGAYALYEACREAASWE-GE 786 Query: 237 KMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLK 296 + +S+NL P+ N +S + ++ + L P ++ VE TES ++ +++LK Sbjct: 787 QSVSVNLSPLQFKNSS-LISVVEGALRESGLAPHRLEVEITESVLLDDALGNIRTLQNLK 845 Query: 297 AAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLE 356 A G+ +A+D FG G++ L L F D+IKI + I ++ S AII+AI SL+ Sbjct: 846 ALGVQIALDDFGTGYSSLSYLRSFPFDKIKIDKSFINDMGDSREALAIIRAITGMSRSLD 905 Query: 357 IQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGI 394 IQ++A GV + E++ L G +FQG LF + + + + Sbjct: 906 IQITAEGVESSEQFARLREEGCTLFQGYLFGRPQPSEL 943 >UniRef50_B8H3B9 Sensory box/GGDEF family protein n=5 Tax=Caulobacteraceae RepID=B8H3B9_CAUCN Length = 748 Score = 298 bits (763), Expect = 3e-79, Method: Composition-based stats. Identities = 57/282 (20%), Positives = 107/282 (37%), Gaps = 12/282 (4%) Query: 116 KFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFA 175 + +R +FE D L + +L + Sbjct: 414 DADELLKKADMALYRAKADGRGAYHFFERAM-DEQLQARRALELDLRRALQAG--EFELF 470 Query: 176 FHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTMAH 230 + P+ R+ EA+++ SP+ + G I L L A Sbjct: 471 YQPLYHLGDERVTGCEALLRWRHPERGMVSPADFIPLAEEIGLIV--QLGEWVLRRACAE 528 Query: 231 ALELGDK-MISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFA 289 A + +++NL P + V +++ + A+ L +++ +E TES ++ Sbjct: 529 AANWPEHVRLAVNLSPAQF-RDRGLVRTVVSALAASGLPAQRLELEITESVLLQDSQANM 587 Query: 290 EAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAII 349 + LKA G+ +++D FG G++ L L F D+IKI Q + ++ AII+A++ Sbjct: 588 TMLHDLKALGVRISMDDFGTGYSSLSYLRSFPFDKIKIDQTFVRDILHDSDAMAIIKAVL 647 Query: 350 KCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 S+ + +A GV T + L G QG ++ Sbjct: 648 DLGASMGVVTTAEGVETQAQLDALRQQGCAEIQGYFISRPAP 689 >UniRef50_Q5NYX4 Complex sensory protein with histidine kinase domain n=2 Tax=Rhodocyclaceae RepID=Q5NYX4_AZOSE Length = 1246 Score = 298 bits (763), Expect = 3e-79, Method: Composition-based stats. Identities = 63/280 (22%), Positives = 115/280 (41%), Gaps = 16/280 (5%) Query: 120 TYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF--AFH 177 + + FR + + ++E + L + L+ D A+ Sbjct: 818 LLRNANVALFRAKEMGRDTFCFYE-----TGLNVRTAPRLRLELALRRAIEQDELFLAYQ 872 Query: 178 PIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTMAHAL 232 P VD L+ ++ EA+ + SP + G I A A Sbjct: 873 PKVDLLTGEVVGSEALCRWRHPELGLVSPGEFIPIAEESGLILPIGRWVLETACAQARRW 932 Query: 233 ---ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFA 289 + + +++N+ P+ + D V+ + + L P +++E TES ++ Sbjct: 933 IDDGIDYRRVAVNVSPLQFFRD-DLVADVAALLSRYRLEPASLMLEITESAIMGNPARAI 991 Query: 290 EAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAII 349 ++ LKA G+ +AID FG G++ L L RF D +KI + +T++ + AI +II Sbjct: 992 VMMQQLKAIGVKLAIDDFGTGYSSLSALKRFPIDYLKIDRAFVTDITTNASDAAIAVSII 1051 Query: 350 KCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 SL ++V A GV T + ++L G + QG F+ Sbjct: 1052 SLAHSLNLRVIAEGVETEGQVLYLRGRGCDEMQGYHFSPP 1091 >UniRef50_A4BJS0 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Reinekea blandensis MED297 RepID=A4BJS0_9GAMM Length = 857 Score = 298 bits (763), Expect = 3e-79, Method: Composition-based stats. Identities = 77/335 (22%), Positives = 134/335 (40%), Gaps = 21/335 (6%) Query: 68 DPRHYNIVELLCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQ 127 D H V+L+ A R F G +L + A F + + Sbjct: 519 DIAHDRSVKLMD--AMKRPFQTQGDQLIV-----SASLGLAFFHDHSLTASELLSHADMA 571 Query: 128 FFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPIVDPLSRRI 187 +R + F+ ++ + + + ++ H F P VD R+I Sbjct: 572 MYRAKETGKNRIILFQEEMAEASERLLELKEDSRNALRRDE---FHLVFQPQVDARDRKI 628 Query: 188 IAFEAIVQKNEDSPSAIAVGQR----KDGEIYTA------DLKSKALAFTMAHALELGDK 237 + EA+++ S ++ G+ +DGE+ +L + LA L D Sbjct: 629 LGAEALLRWTHPSRGMVSPGEFIPLLEDGEMMPLVGQKVIELAAAQLADWRKEGLIREDF 688 Query: 238 MISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKA 297 +S+N+ P + D VS + + + L I +E TE +I D A+K L+ Sbjct: 689 RLSLNVSPQQF-RQADFVSTVRTVLDEHDLPAYLIDLEITEGMIIDNIDHTVAAMKELRE 747 Query: 298 AGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEI 357 GI +ID FG G++ L L R D +K+ Q + ++ AI++ II L++ Sbjct: 748 MGIHFSIDDFGTGYSNLNYLKRLPLDVLKVDQSFVRDIEHDANDTAIVRTIIAMADQLKL 807 Query: 358 QVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLN 392 A GV T ++ L G ++FQG L++ N Sbjct: 808 NTVAEGVETEDQLTLLRELGCQVFQGYLYSPPLKN 842 >UniRef50_Q20XI9 Diguanylate cyclase/phosphodiesterase n=11 Tax=Bradyrhizobiaceae RepID=Q20XI9_RHOPB Length = 915 Score = 297 bits (762), Expect = 4e-79, Method: Composition-based stats. Identities = 74/351 (21%), Positives = 135/351 (38%), Gaps = 20/351 (5%) Query: 45 SHFFQLLEGPEEQVKMIYRAICQDPRHYNIVELLCDYAPARRFGKAGMELFDLRLHERDD 104 + F L G E + + PR ++ E+ A +A E ++ Sbjct: 550 TDFVARLGGDE------FAILQTAPR--DVQEVTELVARLFETIRAPCECLGHQISTDAS 601 Query: 105 VLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSC 164 + A+ + + L ++ +FE E S + EL Sbjct: 602 IGIALAPPHGTDTDQLIKNADLAMYQAKADGRRTCRFFEPRMEASA-KERRTLELELRKA 660 Query: 165 ALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADL 219 + + PIV+ + +I EA+++ SP+ G I +L Sbjct: 661 IADCAFEIY--YQPIVELRNGDVIGCEALLRWRHPQRGMISPAKFIPVAEATGLIN--EL 716 Query: 220 KSKALAFTMAHALELG-DKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTE 278 L A A + +++N+ P+ + + + A+ L ++ +E TE Sbjct: 717 GEWVLRTACAEAANWPAEMSVAVNVSPVQFKSRT-LPLKVAAALAASGLPASRLELEITE 775 Query: 279 SEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKS 338 + +I + + LK G+ +A+D FG G++ L L RF D+IKI + I + + Sbjct: 776 AVLIDDDETALSVLHELKTLGVRIALDDFGTGYSSLSYLQRFPFDKIKIDRCFIDGIARP 835 Query: 339 GPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 AI+QA++ T+ + +A GV T E+ L G QG LF+ A Sbjct: 836 DGASAIVQAVVNIATARHMTTTAEGVETAEQRDLLRGLGCTHMQGYLFSPA 886 >UniRef50_B9JLU1 Sensory box/GGDEF family protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JLU1_AGRRK Length = 766 Score = 297 bits (762), Expect = 4e-79, Method: Composition-based stats. Identities = 68/312 (21%), Positives = 115/312 (36%), Gaps = 16/312 (5%) Query: 92 MELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWL 151 + L D+ L + A + S + +R L + F Sbjct: 440 IVLNDIELRVTCSIGVASYPSHGSTAGELLASADMAMYRAKELGRDGIALFTSAMTAIVR 499 Query: 152 FIADGSDKELDSCALSPTINDHFA--FHPIVDPLSRRIIAFEAIVQKNEDS-----PSAI 204 +D+ + D F + P VD + RI+A EA+++ N S P Sbjct: 500 KKLSRTDE-----LRQALLRDEFVLHYQPQVDVRTGRIVAAEALIRWNHSSEGLVYPGDF 554 Query: 205 AVGQRKDGEIYTAD---LKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNE 261 + I LK+ IS+N+ E + + Sbjct: 555 IALAEETSLIVPIGEWVLKTACRQAKAWQDQGREPIRISVNVSARQF-QEKRLIETVATA 613 Query: 262 IKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQ 321 + + L P + +E TES ++ ++ L+ G+ +A+D FG G++ L L RF Sbjct: 614 LSESGLDPIWLELEITESLIMKDLAGSIARMQELETLGVKLAVDDFGTGYSSLSALKRFP 673 Query: 322 PDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMF 381 R+KI + I ++ AI AII L ++V A GV T E+ +L +G Sbjct: 674 LSRLKIDRSFIADIPHDADDMAITAAIISLAQKLGLEVIAEGVETEEQARFLVESGCNEI 733 Query: 382 QGDLFAKAKLNG 393 QG LF++ Sbjct: 734 QGYLFSRPVEEA 745 >UniRef50_Q3A4W5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A4W5_PELCD Length = 1274 Score = 297 bits (762), Expect = 4e-79, Method: Composition-based stats. Identities = 55/280 (19%), Positives = 107/280 (38%), Gaps = 12/280 (4%) Query: 118 QLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFH 177 + + + ++ YF + L + L + Sbjct: 949 TILLRNADIAMYKAKAEGCG--LYFYSHEMNEHLIKTLEMENSLRQAL--EKNEFQLYYQ 1004 Query: 178 PIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTAD---LKSKALAFTMA 229 P V+ + RII EA+++ PS + G I L + Sbjct: 1005 PKVEHATGRIIGCEALLRWRHPQRGMIPPSEFIPLAEETGLIVQIGHWVLAEACRQSKIW 1064 Query: 230 HALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFA 289 L +++N+ + + + + ++ + LVP Q+ +E TES V+ Sbjct: 1065 ETEGLPPLTMAVNISARQFYQGENLIQAVKSTLERSQLVPSQLELELTESMVMKDAVNAE 1124 Query: 290 EAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAII 349 ++ +K G+S+++D FG G++ L L F D +KI + I ++ AI+ +II Sbjct: 1125 RTMRKIKQLGVSLSLDDFGTGYSSLNYLRSFPVDSLKIDRSFILDIASDASSAAILNSII 1184 Query: 350 KCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 +L +Q A GV ++ + + G QG LF++ Sbjct: 1185 AIAHTLGLQTVAEGVENNDQLALVANCGCNYIQGYLFSRP 1224 >UniRef50_A4U1P1 Sensory box/GGDEF family protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U1P1_9PROT Length = 768 Score = 297 bits (761), Expect = 5e-79, Method: Composition-based stats. Identities = 64/280 (22%), Positives = 118/280 (42%), Gaps = 12/280 (4%) Query: 120 TYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPI 179 + + +R +F D+ L + + +L + H + PI Sbjct: 480 LLKNADMAMYRAIEDNPNGYRFFAPTM-DAELALRRRLESDLRKAIQRDELELH--YQPI 536 Query: 180 VDPLSRRIIAFEAIVQKNE-----DSPSAIAVGQRKDGEIYTAD---LKSKALAFTMAHA 231 VD SRRII+FEA+++ N SP +G I L+ Sbjct: 537 VDTQSRRIISFEALLRWNHADDGWISPVEFIPMAEGNGMIGPIGEWVLRRACQQMRDWDR 596 Query: 232 LELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEA 291 + + +++N+ + L + D + + + ++ +E TE+ V+ D Sbjct: 597 MGIPPVPVAVNMSALQLKRQ-DVPMLVRKMLTEAGVPSHRLELELTETTVMEDADAAQRI 655 Query: 292 IKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKC 351 + G+ +A+D FG G++ L L RF ++KI + + ++ + AI +AII Sbjct: 656 FADIAGLGVRLAVDDFGTGYSSLARLKRFPVGKLKIDRSFVGDLAEDEGDAAIARAIISM 715 Query: 352 CTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 ++ ++V A GV TPE+ L AG + QG LF++A Sbjct: 716 GHAMGLKVVAEGVETPEQLAILAEAGCDAIQGFLFSRAVP 755 >UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMA7_9GAMM Length = 932 Score = 297 bits (761), Expect = 5e-79, Method: Composition-based stats. Identities = 64/278 (23%), Positives = 108/278 (38%), Gaps = 12/278 (4%) Query: 120 TYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPI 179 + + + YF +DS L + L+ + P Sbjct: 643 LMKNADAAMYHAKASGRNCAQYFNRSLDDS-LKERISLENALNQAL--KLGQFELYYQPQ 699 Query: 180 VDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTAD---LKSKALAFTMAHA 231 +D S RII EA+++ N SP A + G I L + Sbjct: 700 LDVKSNRIIGAEALIRWNHPEKGMISPDAFIPLAEESGLIVDIGSWVLHQASSQLAQWRK 759 Query: 232 LELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEA 291 +S+NL + + E + + I+ + + +E TES ++ +E A Sbjct: 760 QGFDQLSVSVNLSALQVQKES-FAREVADVIREYGVPEACLDLELTESMIMRNAEETIAA 818 Query: 292 IKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKC 351 + + GI +++D FG G++ L L RF D++KI + + ++ I + II Sbjct: 819 LDKIHNLGIQISVDDFGTGYSSLSYLKRFPLDKLKIDRSFVQDITVDTDDAMICKTIISM 878 Query: 352 CTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 +L +QV A GV T + L G E +QG LFAK Sbjct: 879 AHNLNLQVIAEGVETNAQLELLRDYGCEQYQGYLFAKP 916 >UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVK9_METML Length = 1329 Score = 297 bits (761), Expect = 5e-79, Method: Composition-based stats. Identities = 58/285 (20%), Positives = 107/285 (37%), Gaps = 12/285 (4%) Query: 116 KFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFA 175 F+ +R +F + I + EL S Sbjct: 1039 SFEQLAQSADAALYRAKYEGRNNFQFFARQMHEQAHDIL-LLESELRSAIEHE--EFLLY 1095 Query: 176 FHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTAD---LKSKALAFT 227 + P D + +II EA+++ SP+ + G I L++ Sbjct: 1096 YQPQYDSKTSKIIGLEALIRWQHPEKGLVSPAVFIPIAEESGLIAEIGDWVLRTAVKQLA 1155 Query: 228 MAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDE 287 LG +++NL + ++ + ++ + P + +E TE + + Sbjct: 1156 SWQEAGLGAVPVAVNLSVVQF-HQDTLYGSVCQILRDTKVDPSMLELELTEGIAMEDSER 1214 Query: 288 FAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQA 347 + L + G+ ++ID FG G++ L L +F+ D++KI Q + + AII A Sbjct: 1215 TLNVLNQLNSLGVRLSIDDFGTGYSSLSYLKKFKIDKLKIDQSFVRGIGSHPQDAAIITA 1274 Query: 348 IIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLN 392 II SL + A GV T E+ +L + + QG F+K + Sbjct: 1275 IISMAKSLSFKTIAEGVETLEQLNFLIANSCDEIQGYYFSKPLPS 1319 >UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X6V4_METSD Length = 1126 Score = 297 bits (761), Expect = 5e-79, Method: Composition-based stats. Identities = 61/280 (21%), Positives = 110/280 (39%), Gaps = 16/280 (5%) Query: 120 TYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFA--FH 177 +R ++ A + + + L++ + F + Sbjct: 827 LLKHADAAMYRAKESGKNTFRFYAAEANTNSVELLT-----LENNLRRAVERNEFVLHYQ 881 Query: 178 PIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTAD---LKSKALAFTMA 229 P VD S++II EA+V+ SP + G I ++ Sbjct: 882 PKVDLRSQKIIGAEAVVRWQHPELGMLSPMQFIPLAEETGLIIDIGAWIMRESCRQAVEW 941 Query: 230 HALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFA 289 L + +++NL +E + + + + L P+ + +E TES ++ + Sbjct: 942 QQLTGQNVRVAVNLSARQFRDET-LRQTIADALTESGLTPDCLELEITESMIMHNAERAR 1000 Query: 290 EAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAII 349 E ++ G V ID FG G++ L F D +KI + + ++ AI QAII Sbjct: 1001 EVLQHFHDLGAHVLIDDFGTGYSSFGYLKHFPIDSLKIDRSFVRDIPDDVDDMAITQAII 1060 Query: 350 KCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 SL+I+V A GV T E+ +L+ G + QG LF++ Sbjct: 1061 AMAHSLQIKVVAEGVETQEQLAFLKKQGCDQIQGFLFSEP 1100 >UniRef50_A1TX84 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TX84_MARAV Length = 890 Score = 297 bits (760), Expect = 6e-79, Method: Composition-based stats. Identities = 55/282 (19%), Positives = 114/282 (40%), Gaps = 12/282 (4%) Query: 119 LTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHP 178 + + +R + ++ + + ++ L + ++ + P Sbjct: 602 ELFRNADTAMYRAKDVGRNGFQFYSAEMNNR-MRERLYLEQSLRNAIGLHQLS--LWYQP 658 Query: 179 IVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLK---SKALAFTMAH 230 +D S + + EA+++ SP + G I + Sbjct: 659 KLDLASGSVKSAEALIRWRHPQLGMISPGDFIPIAEETGLILPIGAWVIEEASRQLAKWR 718 Query: 231 ALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAE 290 E D ++IN+ L + ++ + + L P+ + +E TE+ ++ + D+ Sbjct: 719 DQENQDIRVAINISAYQL-SHGKLTDQVIQALDSLGLDPQSLTIEVTETAIMPQMDKAVC 777 Query: 291 AIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIK 350 ++SL+ GI VA+D FG G++ L L RF D +KI + ++++ AI++ II Sbjct: 778 ELQSLREMGIRVALDDFGTGYSSLTYLKRFPIDILKIDRSFVSDIADDEESGAIVKTIIN 837 Query: 351 CCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLN 392 +L + V A GV T + +L + G + QG F K + Sbjct: 838 LAHNLNMTVVAEGVETEAQLEFLRTNGCDEVQGYYFCKPLPS 879 >UniRef50_Q1K1R0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K1R0_DESAC Length = 709 Score = 297 bits (760), Expect = 6e-79, Method: Composition-based stats. Identities = 62/309 (20%), Positives = 118/309 (38%), Gaps = 18/309 (5%) Query: 92 MELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPA---ED 148 M++ R H + ++F + + +R + +++ Sbjct: 388 MKIEHHRFHLTASIGISLFPGDATSPEKLLSCADSAMYRAKESGRDAFRFYKPHMNEKAQ 447 Query: 149 SWLFIADGSDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSA 203 L++ + EL + H + P D + +++ EA+V+ N P Sbjct: 448 GLLWL----ETELRLAIEQEQLELH--YQPQYDLNTGQLVGMEALVRWNHPEKGMIPPGE 501 Query: 204 IAVGQRKDGEIYTAD---LKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLN 260 + I L + HA+ + +++N+ + D + Sbjct: 502 FIPQAEETSLIIPLGEWVLNTACRQIAAWHAMGISPIRMAVNISAVQFYR-IDLAQMVAK 560 Query: 261 EIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRF 320 + L + +E TES ++ + AE + L A GI ++ID FG G++ L L RF Sbjct: 561 LLDHYGLPATLLELEITESVLMDDVEAAAETMNKLTAMGIQLSIDDFGTGYSSLSYLKRF 620 Query: 321 QPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEM 380 +KI + I +V + AI +II + I+V A GV T E+ +L+ + Sbjct: 621 PISTLKIDRSFINDVTINEQDAAIALSIISLAGHMGIEVLAEGVETVEQLSFLQRHACQY 680 Query: 381 FQGDLFAKA 389 QG LF + Sbjct: 681 GQGYLFNRP 689 >UniRef50_Q89WT2 Bll0596 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89WT2_BRAJA Length = 833 Score = 297 bits (760), Expect = 7e-79, Method: Composition-based stats. Identities = 59/305 (19%), Positives = 121/305 (39%), Gaps = 13/305 (4%) Query: 94 LFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFI 153 L D R+ + A+ + + + L + +FE D + Sbjct: 516 LGDHRVTVGTSIGIAIAPRDGNDSDVIMKSADLALYSAKSGGRGAFRFFEPEL-DELMHA 574 Query: 154 ADGSDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQ 208 ++++ + H + P V P + ++ FEA+++ + PS Sbjct: 575 RRNLERDMRDAIVGRQFELH--YQPFVSPATGKVNGFEALLRWHHPQQGLVMPSEFIPLA 632 Query: 209 RKDGEIYTADLKSKALAFTMAHALELGDK-MISINLLPMTLVNEPDAVSFLLNEIKANAL 267 + G I L L A A + I++NL P + V ++ + ++ + Sbjct: 633 EETGLIVP--LGEWVLRAACAEAAKWPPHVRIAVNLSPAQF-RSKELVPVVIGALASSGV 689 Query: 268 VPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKI 327 P ++ +E TE+ ++ + + L+ G+ +A+D FG G++ L L +F D+IKI Sbjct: 690 APHRLELEVTETVIMHDSEAVFAVLGQLRELGVRIALDDFGTGYSSLSFLQKFPFDKIKI 749 Query: 328 SQELITNVHK-SGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLF 386 + + + + + +A+++ SL +A GV T E+ L G QG F Sbjct: 750 DRSFVNELSSARAEARHLARAVVRFAVSLGKTTTAEGVETKEQLDILCEEGCLETQGYYF 809 Query: 387 AKAKL 391 ++ Sbjct: 810 SRPMP 814 >UniRef50_B6JGP3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JGP3_OLICO Length = 825 Score = 297 bits (760), Expect = 7e-79, Method: Composition-based stats. Identities = 71/298 (23%), Positives = 120/298 (40%), Gaps = 11/298 (3%) Query: 99 LHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSD 158 +H V +++ + + + + +R +FE D L Sbjct: 492 IHSGCTVGVSIYPQDGEDIETLISNAGVALYRAKKEERGSIRFFEPEM-DRQLREKRVML 550 Query: 159 KELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGE 213 +LD + + H F P DP FEA+V+ P + G Sbjct: 551 HDLDLVLENKQLELH--FQPQADP-DGTPFGFEALVRWRHPEKGLVPPGVFVPLAEETGA 607 Query: 214 IYTADLKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQII 273 I D A A + I+IN+ PM+ + D + + + L P+++ Sbjct: 608 IVAIDEWILRKACQEAASWPKP-LSIAINVSPMSFQH-NDLPGLIHSILLETGLNPKRLE 665 Query: 274 VEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELIT 333 +E TE ++ F ++ +K G+ VA+D FG G++ L L F D+IKI Q + Sbjct: 666 IEITEGVLVQDFSRACSILRRIKNLGVRVAMDDFGTGYSSLSYLQSFPFDKIKIDQAFVA 725 Query: 334 NVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 ++K+ AII+AII +L + V A GV T + +L AG QG L + + Sbjct: 726 QINKNVQSSAIIRAIISLGEALNLGVIAEGVETELQRDFLADAGCFEMQGYLIGRPQP 783 >UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=15 Tax=cellular organisms RepID=A1TI51_ACIAC Length = 1499 Score = 297 bits (760), Expect = 7e-79, Method: Composition-based stats. Identities = 60/308 (19%), Positives = 112/308 (36%), Gaps = 18/308 (5%) Query: 106 LQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCA 165 + D TS L ++ +F+ + + EL++ Sbjct: 1195 VAPFGDGRTSTVGELLKQADLAMYQAKTAGRNTLRFFDP-----GMQAVVTARAELENDL 1249 Query: 166 LSPTINDHF--AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTAD 218 + + F + P +D + EA+V+ SP + G + Sbjct: 1250 RTALAREQFMLHYQPQID-RRGSVTGVEALVRWPHPQRGMVSPGEFIPLAEETGLVLPLG 1308 Query: 219 LKSKALAFTMAHALE----LGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIV 274 A + G +++N+ +E V ++ I A ++ + Sbjct: 1309 RWVLHTACAQLARWQHVPGRGHLSMAVNVSSRQFHHEA-FVEDVVRAITATGAPASRLKL 1367 Query: 275 EFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITN 334 E TES + + + +L++ G+ ++D FG G++ L L R D++KI Q + + Sbjct: 1368 ELTESLFVEDMETTIATMAALRSHGVGFSLDDFGTGYSSLSYLKRMPLDQLKIDQSFVRD 1427 Query: 335 VHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGI 394 + AI+ II SL + V A GV T E+ LE AG +QG F++ Sbjct: 1428 LLADPNDAAIVDTIIALSRSLGLDVIAEGVETAEQRTRLEQAGCRAYQGYFFSRPLPETA 1487 Query: 395 PSIAWPEK 402 +K Sbjct: 1488 LEDFLVQK 1495 >UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q39R25_GEOMG Length = 905 Score = 296 bits (759), Expect = 8e-79, Method: Composition-based stats. Identities = 59/280 (21%), Positives = 105/280 (37%), Gaps = 16/280 (5%) Query: 120 TYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF--AFH 177 + + ++ + + I L++ N F + Sbjct: 600 LLKNADAAMYHAKEQGKNNYQFY-----SAEMNIRVFERLSLETSLHRAVKNQEFLLHYQ 654 Query: 178 PIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTM---A 229 P VD + RI EA+V+ N SP+ + G I A Sbjct: 655 PRVDLRNGRICGVEALVRWNHPEMGLVSPAKFIPLAEETGLIVPMGEWVLRTACAQNKAW 714 Query: 230 HALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFA 289 L +++NL + + ++ + + L P+ + +E TES V+ ++ A Sbjct: 715 QDAGLPPLRMAVNLSARQF-RQENLIAMVEEILMETGLAPQWLELELTESLVMQEAEKSA 773 Query: 290 EAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAII 349 ++ L GI VAID FG G++ L L RF +KI Q I ++ + +++ II Sbjct: 774 AILRELTDRGIEVAIDDFGTGYSSLSYLKRFPIANLKIDQAFIRDMTRDPDDATLVKTII 833 Query: 350 KCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 L ++ A GV E+ +L E QG F++ Sbjct: 834 TMAHGLGMKTIAEGVELAEQIDFLCRHQCEEMQGYYFSRP 873 >UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammaproteobacteria RepID=B3PCE8_CELJU Length = 772 Score = 296 bits (759), Expect = 9e-79, Method: Composition-based stats. Identities = 55/297 (18%), Positives = 112/297 (37%), Gaps = 16/297 (5%) Query: 104 DVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDS 163 + ++F + + + + ++ ++ + + L++ Sbjct: 451 SIGVSIFPEDGADTDELLKNADIAMYKAKEAGKNNCQFYTKGMNATAVNYLL-----LEN 505 Query: 164 CALSPTINDHFA--FHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYT 216 + A + P +D + + EA+V+ SP+ + G I Sbjct: 506 DLRRAIEQNQLALYYQPQIDLKTGDMTGVEALVRWQHPERGLVSPAHFIPLAEETGLIVP 565 Query: 217 AD---LKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQII 273 L+ + +++NL P + + + ++ L + + Sbjct: 566 IGEWVLREACKQKKIWLDTGKNVGKVAVNLSPRQF-RQKNFPGKVEAILQETGLEAKYLE 624 Query: 274 VEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELIT 333 +E TES + E + L G +AID FG G++ L L RF ++KI + I Sbjct: 625 LEITESCAMEHAGETINQLNQLNQMGTFLAIDDFGTGYSSLAYLQRFPIQKLKIDRSFIH 684 Query: 334 NVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 ++H AI + II +++++V A GV T + WL + G + QG L+AK Sbjct: 685 DIHDDANDAAIAKTIIGLAHNMQLRVVAEGVETESQAEWLRAKGCDQVQGFLYAKPM 741 >UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q47FQ3_DECAR Length = 1093 Score = 296 bits (759), Expect = 9e-79, Method: Composition-based stats. Identities = 60/283 (21%), Positives = 116/283 (40%), Gaps = 18/283 (6%) Query: 120 TYDDRALQFFRTFVLATEQSTYFEIPA---EDSWLFIADGSDKELDSCALSPTINDHFAF 176 + ++ YF D++ I + +D + Sbjct: 806 LMRNADTAMYQAKANGRNTYCYFTAEMNAAADNYFQIESDLRRAVDR------NEFEVFY 859 Query: 177 HPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTAD---LKSKALAFTM 228 P++D + RI ++EA+V+ + P+ + G I L+ Sbjct: 860 QPVIDLKTHRITSYEALVRWRHPTKGLVGPAQFITVAEESGLIGEIGTIVLRQACSQLRS 919 Query: 229 AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEF 288 ++++NL P+ N+P+ + ++ L P++I +E TE+ ++ + Sbjct: 920 WIDEGFTSPILALNLSPIQF-NDPNLTEGICRILRDYDLTPDRIELEITETVIMQDGELA 978 Query: 289 AEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAI 348 +++L + G ++ID FG G++ L L RF D +KI + IT++ + +AI+ AI Sbjct: 979 LGTLQNLSSRGFRLSIDDFGTGYSSLAYLKRFPVDTLKIDRSFITDMTANENDRAIVTAI 1038 Query: 349 IKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 + SL + V A GV T E++ L + QG AK Sbjct: 1039 MALANSLHLSVIAEGVETKEQYDLLSALNCNFAQGYYMAKPMP 1081 >UniRef50_B1ZEQ0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Methylobacterium RepID=B1ZEQ0_METPB Length = 716 Score = 296 bits (759), Expect = 9e-79, Method: Composition-based stats. Identities = 64/282 (22%), Positives = 114/282 (40%), Gaps = 12/282 (4%) Query: 116 KFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFA 175 + + + + + FE D+ L G ++EL H Sbjct: 409 DIECLLKEADIALYEAKTGGRGTARLFEPQM-DATLRERLGLERELREALAQSRFELH-- 465 Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTMAH 230 + P+VD RI EA+V+ P+ + G I L+ Sbjct: 466 YQPLVDLSDNRITGMEALVRWRHPERGLVNPAVFIPLAEETGLIVPIG--EWVLSQACRD 523 Query: 231 ALELGD-KMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFA 289 A D +++N+ P+ L N V +L + + L ++ +E TES ++ + Sbjct: 524 AAAWPDAISVAVNVSPLQLRNR-GFVQSVLGALATSGLKASRLELEITESVLLDDTEVNL 582 Query: 290 EAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAII 349 E + SL+ G+ +++D FG G++ + L RF D+IKI + + + AII+AI+ Sbjct: 583 ETLHSLRRLGVRISMDDFGTGYSSISYLRRFPFDKIKIDRSFVPDSAGQSDAGAIIRAIV 642 Query: 350 KCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 SL I GV T + + + G + QG LF+ + Sbjct: 643 SLGASLGITTLVEGVETEPQLATIRAEGAQEVQGYLFSPPRP 684 >UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBG1_BREBN Length = 805 Score = 296 bits (759), Expect = 9e-79, Method: Composition-based stats. Identities = 64/285 (22%), Positives = 110/285 (38%), Gaps = 17/285 (5%) Query: 118 QLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADG--SDKELDSCALSPTINDHFA 175 + + + F + + + D EL+ H Sbjct: 514 SVLMRNADAAMYAAKDKGKN---SFHLYVPNLEQAVNDKMNIQNELNRALARQEFLLH-- 568 Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTAD---LKSKALAFT 227 + P V S I+ EA+++ + P + G I L++ Sbjct: 569 YQPQVSAKSGAIVGVEALIRWDHPERGLLLPDQFISVAEETGLIVPIGEWVLRTACKQNK 628 Query: 228 MAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDE 287 L +++NL + + D + + L PE + +E TES +I Sbjct: 629 QWQDQGLKPLRVAVNLSARQFLKQ-DFTQMIAEILHQTRLAPEYLELEITESSMI-DVHR 686 Query: 288 FAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQA 347 +A+K LK G+ VAID FG G++ L L F +R+KI + + ++ + QAI+ Sbjct: 687 ATQALKELKQLGVHVAIDDFGTGYSSLYYLKEFPLNRLKIDRSFVRDMIEQPSNQAIVST 746 Query: 348 IIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLN 392 II L++ V A GV T EE +L+ E QG LF++ + Sbjct: 747 IISMAHHLQMHVIAEGVETKEELAFLQEHLCEEVQGYLFSRPLPS 791 >UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A14_DECAR Length = 827 Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats. Identities = 59/300 (19%), Positives = 108/300 (36%), Gaps = 12/300 (4%) Query: 98 RLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGS 157 LH + ++F + + + +F + + Sbjct: 515 ELHTSPSIGISIFPDDGPDGDIVLKNADTAMYHAKAAGRNNYQFFAADMNRTAAERLN-I 573 Query: 158 DKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDG 212 +++L ++ F P EA+++ + SP+ + G Sbjct: 574 ERKLRHAIARNELS--LVFQPQFRAEDTTPTGVEALLRWHHPTDGMISPARFIPVAEETG 631 Query: 213 EIYTAD---LKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVP 269 I L + L I++N+ L D + N + + L Sbjct: 632 MIVEIGDWVLATACHEMARWINAGLKPLRIAVNVSARQLRRR-DFCETVANALTTSGLPA 690 Query: 270 EQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQ 329 E + +E TES V+ E ++ L G+++AID FG G++ L L F D +KI + Sbjct: 691 ELLELEITESSVMENPQEAIHILERLGRMGVTLAIDDFGTGYSSLAYLKLFPIDHLKIDR 750 Query: 330 ELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 + ++ +AI I SL + V A GV T ++ L + G + QG LF+K Sbjct: 751 SFVADIEHDLNDRAIAFGTIALAHSLGLNVIAEGVETEDQHELLRANGCDEVQGFLFSKP 810 >UniRef50_Q2SPM3 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SPM3_HAHCH Length = 826 Score = 296 bits (758), Expect = 1e-78, Method: Composition-based stats. Identities = 65/276 (23%), Positives = 114/276 (41%), Gaps = 14/276 (5%) Query: 124 RALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPIVDPL 183 F+ + T F+ D+ + + EL + + F + P V Sbjct: 537 ADTALFQAKHEGRNKVTIFKAEMADA-VSKRLSIENELRTAVKDKALM--FYYQPQVSVT 593 Query: 184 SRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADL-----KSKALAFTMAHALE 233 RII EA+++ N +P I TA L + + Sbjct: 594 DGRIIGAEALIRWNHPQRGLITPDEFVPVLENSNLILTAGLDMFTQACMQVKEWLDKGWW 653 Query: 234 LGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIK 293 D +++N+ P +P+ V ++ ++A L I +E TES VI + + Sbjct: 654 EEDMRVAVNVSPKQFY-QPEFVEQIIEILEATRLPAYCIELEVTESVVIQNVKDTINKML 712 Query: 294 SLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCT 353 SLK G+ ++D FG G++ L L R D +KI + +T+++ AI+ I+ Sbjct: 713 SLKGLGVRFSLDDFGTGYSSLSYLKRLPVDSLKIDRSFVTDINSDVNDAAIVSTILAMAA 772 Query: 354 SLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 L+++V A GV T E +L+ + +QG LF+K Sbjct: 773 HLDLEVVAEGVETVEHLEFLKENECDYYQGYLFSKP 808 >UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Proteobacteria RepID=Q21WW2_RHOFD Length = 874 Score = 296 bits (758), Expect = 1e-78, Method: Composition-based stats. Identities = 68/364 (18%), Positives = 133/364 (36%), Gaps = 36/364 (9%) Query: 55 EEQVKMIYRAICQDPRHYNIV-ELLCD----YAPARRFG----------KAGMELFDLRL 99 +E + + + R + V L D P ++ + F+L Sbjct: 487 DEVLIALAGRLKGAVREQDTVCRLGGDEFILVLPETNAAGAAHIAEMLLQSALVAFELEP 546 Query: 100 HE---RDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAE---DSWLFI 153 HE + A+F S F +R +F + + L + Sbjct: 547 HELTVTPSIGIALFPGDGSDFDTLSRCADAAMYRAKKDGRNNYRFFTAEMQARSERTLTL 606 Query: 154 ADGSDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQ 208 + + L+ L + P + S R++ EA+++ + P+ Sbjct: 607 ENALRRALERNQL------QLHYQPQISLASGRVVGAEALLRWSHPELGAVPPAEFIPVA 660 Query: 209 RKDGEIYTAD---LKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKAN 265 G I L++ + +S+NL + D + + + Sbjct: 661 ETCGLILPIGEWVLRTSVQQLKAWIDAGMLPIALSVNLSSVQF-RHADLPELVTSILNEA 719 Query: 266 ALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRI 325 L + +E TE+ ++ + +L G+ ++ID FG G++ L L +F+ +I Sbjct: 720 QLPAHLLELELTENVAMTDPLGAIAVMNNLHERGVRMSIDDFGTGYSSLSYLKKFRVYKI 779 Query: 326 KISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDL 385 KI Q + ++ + +AI+ AII TSL +Q A GV T + +L++ G QG Sbjct: 780 KIDQSFVRDITEDSDDKAIVGAIISMATSLGMQTIAEGVETEGQLEFLKAKGCTEVQGYY 839 Query: 386 FAKA 389 F++ Sbjct: 840 FSRP 843 >UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WHK3_VEREI Length = 859 Score = 296 bits (758), Expect = 1e-78, Method: Composition-based stats. Identities = 65/308 (21%), Positives = 121/308 (39%), Gaps = 18/308 (5%) Query: 104 DVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDS 163 + +F + L ++ +F+ + A + L++ Sbjct: 548 SIGVTLFGEQRLSVDELLKRADLALYQAKAAGRNTQRFFDPDMQ-----AAVNARSNLEA 602 Query: 164 CALSPTINDHF--AFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYT 216 + P+VD R++ EA+V+ P+ + G I Sbjct: 603 DLRQGLARAELLVYYQPVVD-HQARLMGAEALVRWRHPQRGMIGPADFIPLAEQTGLILP 661 Query: 217 ADLKSKALAFTMAHAL----ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQI 272 A + IS+N+ +P V+ +L+++K++ P ++ Sbjct: 662 LGQYVLQTACAQLQRWSQHPDTAGLSISVNVSARQF-RQPGFVAQVLHQLKSHGADPRRL 720 Query: 273 IVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELI 332 +E TES ++ ++ + LK+ G+ A+D FG G++ L L R D+IKI Q + Sbjct: 721 KLELTESLLLGDIEDTIARMAQLKSEGVGFALDDFGTGYSSLSYLKRLPLDQIKIDQSFV 780 Query: 333 TNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLN 392 V AI++ I+ SL++QV A GV T + +L+ G E FQG LF + Sbjct: 781 REVLADPNDAAIVRTILALAKSLDLQVVAEGVETTGQLSFLQLHGCEGFQGYLFGRPVPM 840 Query: 393 GIPSIAWP 400 + + A Sbjct: 841 EVFACAHR 848 >UniRef50_C6ME82 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6ME82_9PROT Length = 1136 Score = 295 bits (757), Expect = 1e-78, Method: Composition-based stats. Identities = 61/312 (19%), Positives = 117/312 (37%), Gaps = 16/312 (5%) Query: 102 RDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKEL 161 + ++F + + + Y L IA L Sbjct: 814 NTSIGISLFPTDANSVTELIQHADMAMYLAKQEGRNTYRYHTDA-----LSIAANERLVL 868 Query: 162 DSCALSPTINDHFA--FHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEI 214 ++ F + P++D +++ EA+V+ SP + G I Sbjct: 869 ETQLRQALSAGEFVLHYQPLIDARKGQVMGVEALVRWQPPDKAMVSPGKFIPIAEETGLI 928 Query: 215 YTADLKSKALAFTMAHAL---ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQ 271 A A + ++++NL +E + V + ++ L Sbjct: 929 VPLGEWVLRTACAQGRAWMDADFPPLVMAVNLSVRQFQSE-NLVELIRQVLEETKLPAAC 987 Query: 272 IIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQEL 331 + +E TES + ++ E +K+LK+ G+ ++ID FG G++ L L RF D++KI Q Sbjct: 988 LELELTESMFMEHAEQSIEILKTLKSLGVRLSIDDFGTGYSSLTYLKRFPIDKLKIDQSF 1047 Query: 332 ITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 + + + I II +L++ V A GV + ++ L G + +QG LF + Sbjct: 1048 VHGLAYDPNDREIAATIIAMARNLKLDVLAEGVESEQQLDILNQHGCDYYQGYLFHRPVP 1107 Query: 392 NGIPSIAWPEKK 403 + + E K Sbjct: 1108 AQELEVWFRENK 1119 >UniRef50_Q2SF23 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SF23_HAHCH Length = 637 Score = 295 bits (757), Expect = 1e-78, Method: Composition-based stats. Identities = 58/278 (20%), Positives = 113/278 (40%), Gaps = 12/278 (4%) Query: 120 TYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPI 179 + L +R ++ +F ++ ++EL F P Sbjct: 345 LMKNADLALYRAKEHGRDRY-HFYTEELNAHALKQLLMEQELRHALQFEEFT--LGFQPQ 401 Query: 180 VDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKS---KALAFTMAHA 231 V+ + +I++ EA+++ + S P + + G I + M Sbjct: 402 VNLTTGKIVSVEALIRWHHPSKGLVMPDSFISVAEETGLINPIGRWVLKNACMQMKMLQD 461 Query: 232 LELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEA 291 L I++NL ++P + + L PE + +E TES ++ Sbjct: 462 LTGSAIKIAVNLSARQF-DDPKLEQSIEEALNETGLEPEWLELEVTESMLMGDIQAVTNK 520 Query: 292 IKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKC 351 +K L+ G+S+AID FG+G++ L L + + +K+ +E + ++ + I AII Sbjct: 521 LKRLRQTGVSLAIDDFGSGYSSLSYLKKLPVNALKVDREFVRDIPEDSNDMEITSAIIAV 580 Query: 352 CTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 L+++V A GV T E+ +L + + QG F+K Sbjct: 581 AHKLQLKVVAEGVETAEQKEYLLANQCDFAQGYFFSKP 618 >UniRef50_C7LQR9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=C7LQR9_DESBD Length = 1262 Score = 295 bits (757), Expect = 2e-78, Method: Composition-based stats. Identities = 61/289 (21%), Positives = 111/289 (38%), Gaps = 16/289 (5%) Query: 116 KFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFA 175 + D + ++ + + + EL ++ H Sbjct: 963 GAEDILRDADIAMYKAKERGRGHLVFHNRM--RQEVLEVINMENELRRAIEGNSLELH-- 1018 Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTMAH 230 + PI D ++ FEA+V+ P + G I A Sbjct: 1019 YQPIFDVDGGKLEGFEALVRWRHPEHGMIMPDRFIPLAEESGLIVPLGQWVVNAACRQLK 1078 Query: 231 ALELG------DKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISR 284 + + +S+NL V +L ++ N + P ++ +E TES +I Sbjct: 1079 SWDDESGTAEYGLTMSVNLSCKQFAQHT-LVDMILRALRENDIAPPRLKLEITESAIILD 1137 Query: 285 FDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAI 344 AE ++ LK G+ +A+D FG G++ L L +F D +KI + I+ I Sbjct: 1138 PAAAAEKLRRLKEIGVLLAVDDFGTGYSSLSYLRQFPMDILKIDRSFISGTDTPKENAEI 1197 Query: 345 IQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNG 393 +++I+ SL ++V+A GV T E+ L+S + QG +F+K G Sbjct: 1198 VRSIVDMAHSLGLRVTAEGVETQEQLERLQSINCDRAQGYMFSKPMAPG 1246 >UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Acidovorax RepID=A1TLA6_ACIAC Length = 1120 Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats. Identities = 73/361 (20%), Positives = 132/361 (36%), Gaps = 30/361 (8%) Query: 42 FNGSHFFQLLEGPEEQVKMIYRAICQDPRHYNIVELLCDYAPARRFGKAG--MELFDLRL 99 F G F +LEG + + L + + + E+ + Sbjct: 752 FGGDEFVVMLEGLDAD--------------TALAALQAEQVAEKLLAQLNRPFEMGAQQH 797 Query: 100 HERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDK 159 + + +F L ++ +F+ + + + Sbjct: 798 YSTPSIGITLFGDQRRTVDELLKRADLAMYQAKAAGRNTQRFFDPDM-QAQVTARSQLES 856 Query: 160 ELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEI 214 +L + H PIVD + R+ EA+V+ SP+ + G I Sbjct: 857 DLRQGIARHELTVHL--QPIVDGST-RLCGAEALVRWRHPVKGLISPADFIPLAEETGLI 913 Query: 215 YTADLKSKALAFTM----AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPE 270 + A A I++N+ +PD V+ +L + P+ Sbjct: 914 LPLGRQVLQTACEQLVRWATHPATASFTIAVNVSARQF-RQPDFVAEVLGTLAGTGANPQ 972 Query: 271 QIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQE 330 ++ +E TES ++ ++ + LK G+ A+D FG G++ L L R D +KI Q Sbjct: 973 RLKLELTESLLLGDVEDTICRMAQLKRVGVGFALDDFGTGYSSLSYLKRLPLDLVKIDQS 1032 Query: 331 LITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 + +V AI++ I+ SL++QV A GV T + +L+ G E FQG LF + Sbjct: 1033 FVRDVLTDPNDAAIVRTILALAKSLDLQVVAEGVETAGQLSFLKLHGCEGFQGYLFGRPV 1092 Query: 391 L 391 Sbjct: 1093 P 1093 >UniRef50_Q2SFK1 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFK1_HAHCH Length = 1092 Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats. Identities = 70/344 (20%), Positives = 137/344 (39%), Gaps = 18/344 (5%) Query: 53 GPEEQVKMIYRAICQDPRHYNIVELLCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDK 112 G +E V ++++ C P + + + RR L D + + F + Sbjct: 591 GGDEFVILMHKEECDRPLGLMLNRIQQLVSQPRR-------LKDKEILVTPSIGVCQFPE 643 Query: 113 GTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTIND 172 + ++ + + + + +++L + + Sbjct: 644 DGEDASTLLKNADTAMYKAKERGRNRICSYTQEM-NESIQKRVQMEQDLRRGIENGEL-- 700 Query: 173 HFAFHPIVDPLSRRIIAFEAIVQKNEDS----PSAIAVGQRKDGEIYTAD---LKSKALA 225 + P +DP + EA+V+ + P + G I D L++ L Sbjct: 701 ELYYQPQLDPHGGGAVGLEALVRWRKGDRMVPPLEFIPIAEETGLITEVDAWVLRAACLQ 760 Query: 226 FTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 M + +S+NL P + V + ++ + + P + +E TES V+ Sbjct: 761 LKMWRDQKQQMVPVSVNLSPRQF-QDAYCVELVRKVLQESNIEPGCLKIEVTESMVMHNA 819 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 +E + LKA G+ +++D FG G++ L L F D++KI + + NV AII Sbjct: 820 EEALRTMTQLKAMGVQLSMDDFGTGYSSLSYLKMFPFDQLKIDKSFVRNVTNDPQEAAII 879 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 +AII +L I++ A GV T E++ +L AG ++ QG ++ Sbjct: 880 RAIIGLGKTLGIKIVAEGVETVEQYSFLVRAGCDLIQGYFYSPP 923 >UniRef50_B8DSE5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DSE5_DESVM Length = 1251 Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats. Identities = 62/336 (18%), Positives = 127/336 (37%), Gaps = 24/336 (7%) Query: 77 LLCDYAPARRFGKAGMELFDL---------RLHERDDVLQAVFD-KGTSKFQLTYDDRAL 126 LL D RR + L ++ + V +G D + Sbjct: 860 LLEDVDSPRRIVQITRRLLAALERPVRMGAKVVRTSASIGMVLRTQGYDTADALLRDADI 919 Query: 127 QFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPIVDPLSRR 186 ++ + F + + + +L + + + P++ R Sbjct: 920 AMYQAKAQGKGRFRVFNQSMHRHTMEMM-TLEGDLSMAMRRKQL--YLEYQPVLAVDGAR 976 Query: 187 IIAFEAIVQKNEDS-----PSAIAVGQRKDGEI-----YTADLKSKALAFTMAHALELGD 236 ++ FEA+V+ + P+ + G I + + + LA A D Sbjct: 977 LLGFEALVRWRHPTEGAVPPARFIPMAEETGLILRIGQWVLEQAAATLARWRATLPGAHD 1036 Query: 237 KMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLK 296 +S+NL ++P+ + + L PE + +E TE+ ++ D + +++L+ Sbjct: 1037 LYVSVNLSARQ-ASQPNLTGRVARILSDTGLPPEALKLEITETAIMKDPDGALQRLEALR 1095 Query: 297 AAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLE 356 G+ + ID FG G++ L L RF D +K+ + ++ V + I++ ++ SL Sbjct: 1096 RLGVGIGIDDFGTGYSSLAYLQRFPVDTLKVDRSFVSAVAGDAENREIVRTVVTLGRSLG 1155 Query: 357 IQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLN 392 + V A GV T E++ + G QG F++ Sbjct: 1156 LHVVAEGVETAEQFAIVAELGCHSVQGYHFSRPVAE 1191 >UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H3Y9_METFK Length = 858 Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats. Identities = 57/285 (20%), Positives = 106/285 (37%), Gaps = 16/285 (5%) Query: 115 SKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF 174 S + + +F + ++++ + + F Sbjct: 560 SDPYSLLKNIDTAMYAAKSSGKNNFKFFTEKMRE-----QINERMQMENHLRQAILRNEF 614 Query: 175 A--FHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTAD---LKSKAL 224 + P VD + RII EA+V+ N P + + L Sbjct: 615 ELHYQPQVDLGTGRIIGMEALVRWNHPEWGMVHPEKFIRVAEECNLVIPLGEWVLCEACR 674 Query: 225 AFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISR 284 + L IS+N+ L + + + N + + + P + +E TES V+ Sbjct: 675 QISQWSRQGLEAVCISVNISARQLKSR-YLFTLIDNLMMTHQIKPGMLELEITESAVMDD 733 Query: 285 FDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAI 344 ++ +K LK G+++AID FG G++ L L R+KI + + ++ AI Sbjct: 734 PEQTIPRMKELKNKGVALAIDDFGTGYSSLSYLKLLPLTRLKIDRSFVKDIETDPNDAAI 793 Query: 345 IQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 A I +L + + A GV T + +L + G + QG F+K Sbjct: 794 CAATIALARTLGLGLVAEGVETEAQLEYLRAQGCDSAQGYYFSKP 838 >UniRef50_Q31G31 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31G31_THICR Length = 891 Score = 295 bits (755), Expect = 2e-78, Method: Composition-based stats. Identities = 59/301 (19%), Positives = 121/301 (40%), Gaps = 16/301 (5%) Query: 99 LHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSD 158 H + ++F + + ++ ++ + + Sbjct: 579 FHITASIGISIFPNDGTDANQLLQNADAAMYQAKEDGKNTYHFYT-----KEMTEQAYNR 633 Query: 159 KELDSCALSPTINDHFA--FHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKD 211 +++ N F + P VD + +I+ FEA+V+ N + P + Sbjct: 634 LLMENNLRDALDNQQFELYYQPQVDITTNKIVGFEALVRWNHEQKGIIPPDHFIPLAEET 693 Query: 212 GEIYTADLKSKALA---FTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALV 268 G I + A+A + H L + I+IN+ L + L + N Sbjct: 694 GLIIPLGKQIIAMASQTISEWHQANLTNARIAINVSAKQL-RDSRFFHNLNTALNKNNCQ 752 Query: 269 PEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKIS 328 P+ I +E TES V+ + + + L+ GI+++ID FG G++ L L + ++KI Sbjct: 753 PDWIEIEITESSVMQNPELAIKLLSKLRRKGITISIDDFGTGYSSLAYLKKLPITKVKID 812 Query: 329 QELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 + ++N+ + I +AII SL + + A G+ T E+ ++ G ++ QG +++ Sbjct: 813 RSFVSNLPQDKDDAEITKAIISMSQSLNLDIIAEGIETQEQQNFVLQEGCKLIQGYYYSR 872 Query: 389 A 389 Sbjct: 873 P 873 >UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9LZ98_GEOSF Length = 912 Score = 295 bits (755), Expect = 2e-78, Method: Composition-based stats. Identities = 65/312 (20%), Positives = 122/312 (39%), Gaps = 16/312 (5%) Query: 92 MELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWL 151 + L D + + A++ + + Q + L ++ YF + Sbjct: 593 LVLNDQEIFITASIGIAIYPEDGTDVQGLLKNADLAMYKAKDQGKNAFQYF-----SREM 647 Query: 152 FIADGSDKELDSCALSPTINDHFA--FHPIVDPLSRRIIAFEAIVQKNEDS-----PSAI 204 + L++ + F + P +D S R++ EA+++ PS Sbjct: 648 NVQALEHLILENSLRRALERNEFVIFYQPQMDLKSGRLVGMEALIRWQHPDLGLLPPSRF 707 Query: 205 AVGQRKDGEIYTADLKSKALAFTMAHAL---ELGDKMISINLLPMTLVNEPDAVSFLLNE 261 + G I + A A +++NL + + + + Sbjct: 708 IPMAEETGLILPIGEWALQTACAKNRAWMDAGFMPLRVAVNLCGIQF-RQKKFIELIEAV 766 Query: 262 IKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQ 321 +K L P Q+ +E TES ++S+ +E + LK G+S+AID FG G++ L L F Sbjct: 767 LKKTGLAPSQLELELTESMLMSKAEESTTVLHKLKEMGVSLAIDDFGTGYSSLSYLKNFP 826 Query: 322 PDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMF 381 +R+KI + I +V + AI+ AII +L ++V+A GV + +L + Sbjct: 827 INRVKIDRSFIRDVPNNPDDTAIVSAIIAMAHNLNLKVTAEGVENHSQLEFLSTRNCNEI 886 Query: 382 QGDLFAKAKLNG 393 QG L + Sbjct: 887 QGYLLSSPLPEA 898 >UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax=Proteobacteria RepID=A1K5K2_AZOSB Length = 1089 Score = 295 bits (755), Expect = 2e-78, Method: Composition-based stats. Identities = 65/289 (22%), Positives = 108/289 (37%), Gaps = 17/289 (5%) Query: 111 DKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTI 170 G + L + +R L + ++ + L EL++ Sbjct: 786 RDGEAAATL-LKHADVAMYRAKELGRNRFQFYAPEMNERIL-----ERLELENSLRRALE 839 Query: 171 NDHFA--FHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKS-- 221 ND + P V R+I EA+++ SP+ + G I Sbjct: 840 NDELELHYQPKVSLRDGRVIGAEALIRWRHPQLGMVSPADFIPLAEETGLIVPIGEWVVD 899 Query: 222 -KALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESE 280 L +++N+ +E L + A+ L P Q+ VE TES Sbjct: 900 HACRQLRAWLDAGLPQISVAVNVSARQFQHEQ-LTHVLARALAAHRLPPGQLHVEVTESA 958 Query: 281 VISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGP 340 V+ + ++ LK G+ +++D FG G+ L L RF D IKI + +T++ S Sbjct: 959 VMCEPERTIFTLRELKNIGVRISLDDFGTGYCSLNYLKRFPIDSIKIDRCFVTDLATSAE 1018 Query: 341 RQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 AI I+ SL V A GV + +L G + QG LF++ Sbjct: 1019 DAAIALMIVSLAHSLNQTVIAEGVENEAQLDFLRRHGCDEMQGFLFSRP 1067 >UniRef50_C6ML43 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Geobacter sp. M18 RepID=C6ML43_9DELT Length = 773 Score = 295 bits (755), Expect = 3e-78, Method: Composition-based stats. Identities = 54/284 (19%), Positives = 103/284 (36%), Gaps = 16/284 (5%) Query: 116 KFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFA 175 Q + + +R Y+ L S ++ N+ F Sbjct: 345 DAQTLVKNAEVAMYRAKEQGRNCFRYYT-----RELNERVASRMSMEKHLRKALENEEFE 399 Query: 176 --FHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLK---SKALA 225 + P D + R+ E +++ P + + G I + L Sbjct: 400 LWYQPQADLNTGRLSGMEGLIRWRNAELGMVQPGSFIPLAEETGLIVQIGEWVVRTACLQ 459 Query: 226 FTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 L +++NL P + + + ++ L P + +E ES V+ Sbjct: 460 NRRWQDAGLSPLTVAVNLSPRQF-RDRELTGVIAGVLRETGLDPRYLGLEIVESMVMHDV 518 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 + A + LKA G+ +++D FG G++ L L RF ++KI + ++ AI Sbjct: 519 ESAAAMLNELKALGVKLSMDDFGTGYSSLSYLKRFPFAKLKIDLSFVRDIMTDPGSAAIA 578 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 ++II +L + V A GV T + +L + G QG ++ Sbjct: 579 KSIISMAHNLNLSVVAEGVETEGQLEFLRAHGCNEIQGYYLSRP 622 >UniRef50_A7BQZ3 Sensory box/GGDEF family protein n=1 Tax=Beggiatoa sp. PS RepID=A7BQZ3_9GAMM Length = 576 Score = 295 bits (755), Expect = 3e-78, Method: Composition-based stats. Identities = 54/281 (19%), Positives = 109/281 (38%), Gaps = 12/281 (4%) Query: 117 FQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAF 176 + + R +F+ + F + +L + + + Sbjct: 278 AAILLKNADTAMARAKAAGKNTYQFFKAEM-NKAAFERLMLENQLRKVLSNNEL--ILYY 334 Query: 177 HPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTAD---LKSKALAFTM 228 P ++ S +++ EA+++ SP + G I L++ Sbjct: 335 QPQIELSSGQLVGMEALLRWQHPEFGICSPVKFVPVAEEMGLIVPIGEWVLRTACQQNQT 394 Query: 229 AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEF 288 L +S+N+ + + + + + + L P + +E TES +++ Sbjct: 395 WQQLGFPPVRVSVNVSSRQFFRD-NLLQIIKEALADSNLNPIYLELELTESVLMAEESGI 453 Query: 289 AEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAI 348 E + ++ G+ +AID FG G++ L L RF D +KI + + ++ G AI AI Sbjct: 454 FELLTEVQNMGVHIAIDDFGTGYSSLSYLKRFPLDVLKIDRSFVKDICSDGNDAAITTAI 513 Query: 349 IKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 I SL + V A GV T + +L+ ++ QG F++ Sbjct: 514 IAMAHSLGLSVVAEGVETQGQLTFLQQQHCDVIQGYYFSRP 554 >UniRef50_Q0G5H0 GGDEF family protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G5H0_9RHIZ Length = 684 Score = 294 bits (754), Expect = 3e-78, Method: Composition-based stats. Identities = 65/291 (22%), Positives = 117/291 (40%), Gaps = 17/291 (5%) Query: 111 DKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTI 170 GT+ LT + + FE D + L+ Sbjct: 387 AHGTTADDLT-QSADIALYAAKDAGRSTYKLFETAMAD-----EVQLRRSLEIDLRRALN 440 Query: 171 NDHFA--FHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKA 223 + F + P VD S EA+++ SP + G I + Sbjct: 441 REEFEVYYQPQVDAKSGDYSGAEALIRWRHPQRGMLSPVVFIPLAEELGLIGPIG--NWV 498 Query: 224 LAFTMAHALELGDKM-ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVI 282 L A+ + +++NL P +++ + + + L P ++ +E TE+ +I Sbjct: 499 LRQACRDAVTWPSHLSVAVNLSPAQMMDRR-LPKSVKSILNETGLDPARLELEITETSLI 557 Query: 283 SRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQ 342 + + L+A GI++++D FG G++ L L RF +RIKI + I + Sbjct: 558 GNDVQALAVLNELRAMGIAISLDDFGTGYSSLSYLHRFPINRIKIDRSFIDRIPTDVDSA 617 Query: 343 AIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNG 393 AI+QAI K SL ++++A G+ E+W + ++ G + QG LF+K Sbjct: 618 AIVQAIAKLGGSLGMKITAEGIENEEQWSFSKTEGCDHLQGYLFSKPIPGS 668 >UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=4 Tax=Rhizobiaceae RepID=A6U700_SINMW Length = 772 Score = 294 bits (754), Expect = 3e-78, Method: Composition-based stats. Identities = 66/294 (22%), Positives = 116/294 (39%), Gaps = 16/294 (5%) Query: 119 LTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHP 178 + + +R L + F ++ ++ A + F P Sbjct: 483 ELLANADMAMYRAKELGRDNIQVFTEEMAARAHERLQWQEELREALAGEEFL---LHFQP 539 Query: 179 IVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTAD---LKSKALAFTMAH 230 ++ + RI A EA+++ N SPS + G I L++ Sbjct: 540 QMNLGTGRIFAAEALLRWNHPVRGIISPSVFIPLAEETGLIVPIGDWALRAACRQLKAWQ 599 Query: 231 ALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAE 290 L +IS+N+ E + S + +K L + +E TES ++ Sbjct: 600 DAGLPPLIISVNVSARQF-RERNWASRVAEILKETGLEARYLELELTESLIMQDVPGAIA 658 Query: 291 AIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIK 350 + +L+A G+ +AID FG G++ L L RF R+KI + +T++ AI AII Sbjct: 659 TMHALEAIGVHLAIDDFGTGYSSLSALKRFPVRRLKIDRSFVTDIPLDADDMAITSAIIS 718 Query: 351 CCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA----KLNGIPSIAWP 400 L ++V A GV + + +L+ AG + QG F++ + S A P Sbjct: 719 LAQKLGLRVIAEGVESEAQVEFLQKAGCDEIQGYFFSRPLSAEAFESLLSSARP 772 >UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L9X9_TOLAT Length = 1101 Score = 294 bits (754), Expect = 3e-78, Method: Composition-based stats. Identities = 63/281 (22%), Positives = 110/281 (39%), Gaps = 12/281 (4%) Query: 119 LTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHP 178 +R YF + D + + L+ F P Sbjct: 808 ELLQQADAAMYRAKAHGRSCFRYFSDELTRAAEQRLDLEVRLQRALRLNELC---LYFQP 864 Query: 179 IVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTAD---LKSKALAFTMAH 230 +D S RII EA+V+ + SP+ + G I L Sbjct: 865 QIDISSNRIIGAEALVRWQDPAHGLISPAQFIPVAEETGLIKQLGEWVLLEACRQGKEWQ 924 Query: 231 ALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAE 290 L +++N+ P+ N + + + N +K + +E TES +++ +E E Sbjct: 925 QKGLPAINLAVNISPVQFRN-SNILESVFNALKQTGYPASLLELELTESALMTHENEAVE 983 Query: 291 AIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIK 350 + +L+ GI +AID FG G++ L L RF D +KI + + ++ I AI+ Sbjct: 984 ILSALRKYGIRLAIDDFGTGYSSLAYLKRFPLDVLKIDKSFVDDIPHKKDDMEIAAAIVA 1043 Query: 351 CCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 +L ++V A GV T E+ +L+ G + +QG L + Sbjct: 1044 MAHTLRLKVLAEGVETEEQLTFLKEQGCDCYQGYLMSPPVP 1084 >UniRef50_Q3MFD3 Diguanylate cyclase/phosphodiesterase n=4 Tax=Nostocaceae RepID=Q3MFD3_ANAVT Length = 576 Score = 294 bits (754), Expect = 3e-78, Method: Composition-based stats. Identities = 66/292 (22%), Positives = 123/292 (42%), Gaps = 13/292 (4%) Query: 120 TYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPI 179 + ++ Q ++ ++ L + EL I + + PI Sbjct: 274 LLQQAHVALYQAKQQGRSQHQFYSPEI-NAQLQERLALENELHGALQRNEIVVY--YQPI 330 Query: 180 VDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTAD---LKSKALAFTMAHA 231 +D +++I A EA+V+ SP+ +G I L++ L Sbjct: 331 IDLQTQQITAVEALVRWQHPTRGLVSPAKFIPIAEANGLIVEIGEWVLRTACLQNRAWQL 390 Query: 232 LELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEA 291 L +S+NL E + V + I+ + L P + +E TES +++ Sbjct: 391 AGLPPIRMSVNLSARQF-EESNLVELVGEIIQESGLHPSYLELEVTESSLMADIQRSVTI 449 Query: 292 IKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKC 351 +K L+ G+ +A+D FG G++ L L RF + +KI + + +V + A+ AII Sbjct: 450 LKQLRELGVWLALDDFGTGYSSLNYLKRFPVNMLKIDRSFVQDVCSNPDSAAVTNAIIAL 509 Query: 352 CTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL-NGIPSIAWPEK 402 SL+++++A G+ T ++ +L+ G + QG F N I I PE+ Sbjct: 510 AKSLQLKITAEGIETQQQLSYLQKRGCQEGQGYYFGIPAPANEITEILQPEE 561 >UniRef50_C4XRM5 Putative signaling protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XRM5_DESMR Length = 821 Score = 294 bits (754), Expect = 3e-78, Method: Composition-based stats. Identities = 65/281 (23%), Positives = 110/281 (39%), Gaps = 19/281 (6%) Query: 121 YDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF--AFHP 178 D + +R + D + L++ + + P Sbjct: 527 LRDADIAMYRAKESGRPSMIF------DRRMHQEILDAINLEADLRAALDRGELLLHYQP 580 Query: 179 IVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTMAHALE 233 IVD + RI FEA+V+ + P + G I A A A + Sbjct: 581 IVDVQTGRIEGFEALVRWDHPDRGLVPPVQFIPLAEETGLIQPLGRFVIAEACRQLRAWQ 640 Query: 234 LG-----DKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEF 288 L +S+N+ V E V + ++ L P + +E TES ++ Sbjct: 641 LELPEAEQLSVSVNVSCHQFVKE-GLVDHVAGVLETTGLDPACLKLEITESVLMHDAQHT 699 Query: 289 AEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAI 348 A + LKA G+ +AID FG G++ L L + D +KI + I+ +G Q I+++I Sbjct: 700 AGELSRLKALGVKIAIDDFGTGYSSLSYLRQLPIDHLKIDRSFISGDDVNGESQEIVKSI 759 Query: 349 IKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 I SL + V A GV ++ L +A + QG +F++ Sbjct: 760 IALARSLGLTVIAEGVEHQDQLDKLRNADCDKAQGFMFSRP 800 >UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZT1_9PROT Length = 1301 Score = 294 bits (754), Expect = 4e-78, Method: Composition-based stats. Identities = 55/284 (19%), Positives = 104/284 (36%), Gaps = 16/284 (5%) Query: 116 KFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFA 175 F Y + +R +F + L++ + F Sbjct: 1007 DFDKLYQSADVAMYRAKQDGRNNFRFFTSEMQAR-----SARRLLLENALRQALSRNQFE 1061 Query: 176 --FHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTAD---LKSKALA 225 + P + +I+ EA+++ SP+ + G I + L++ Sbjct: 1062 LHYQPQISMQDGKIVGAEALLRWYHPELGSISPAEFIPVAEESGLILSIGEWVLRTAVQQ 1121 Query: 226 FTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 ++INL + + ++ + L P I +E TES + Sbjct: 1122 VKRWQDAGHPPVTVAINLSAVQF-RQARLSELVMQILHEANLAPHWIELELTESVAMDNP 1180 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 + L GI ++ID FG G++ L L +F+ +++KI Q + ++ +AI+ Sbjct: 1181 LVAIGVMNDLHGCGIRMSIDDFGTGYSSLSYLRKFKVNKLKIDQSFVRDLADDIESRAIV 1240 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 AII +S+ Q A GV T + +L G QG F++ Sbjct: 1241 TAIITLASSMGFQTIAEGVETAGQLAFLRLQGCNEVQGYYFSRP 1284 >UniRef50_Q98BI1 Mll5564 protein n=2 Tax=Mesorhizobium RepID=Q98BI1_RHILO Length = 514 Score = 294 bits (753), Expect = 4e-78, Method: Composition-based stats. Identities = 71/314 (22%), Positives = 127/314 (40%), Gaps = 13/314 (4%) Query: 86 RFGKAGMELFDLRLHERD---DVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYF 142 R ME ++L H++ V K L L + F Sbjct: 185 RLIDEMMEPYELSTHQQSVSLSVGIVAMPKDGVDPVLILRRSNLALQNARAGGVGNWSVF 244 Query: 143 EIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDSPS 202 + + EL + + H + P +D + RII +EA+++ N Sbjct: 245 DSEMGRVADH-RQWVESELHTAFERGDFDLH--YQPQLDLPTGRIIGYEALIRWNHPERG 301 Query: 203 AIAV-----GQRKDGEIYTADLKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSF 257 I + G I A + AH L D +++N+ P+ + + D V Sbjct: 302 MIPPMEFIQIAEETGMINPIGEWVLRKACSDAHHLP-DDCFVAVNISPVQFMTK-DFVGI 359 Query: 258 LLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLL 317 + + ++A + P ++ +E TE+ ++ D A +K L GISVA+D FG G++ L L Sbjct: 360 VRDTMRATGIKPSRLELEVTETAMMQDRDRAAAILKELAEMGISVAVDDFGTGYSNLSYL 419 Query: 318 SRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAG 377 F ++KI + ++ + A++ I+ +L + + A GV T + L +AG Sbjct: 420 IDFSFGKLKIDRSFVSRIGTDSSSGAVVSTIVGLSRALGVSIIAEGVETESQATLLRAAG 479 Query: 378 IEMFQGDLFAKAKL 391 E+ QG LF + Sbjct: 480 CEVVQGYLFGRPAP 493 >UniRef50_C6XPY9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XPY9_HIRBI Length = 732 Score = 294 bits (753), Expect = 4e-78, Method: Composition-based stats. Identities = 77/315 (24%), Positives = 135/315 (42%), Gaps = 13/315 (4%) Query: 84 ARRFGKAGMELFDLR---LHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQST 140 ARR + F + ++ + A+ G S+ + + + ++ +Q Sbjct: 396 ARRINEQMARAFVINNTEVYVSASIGIAIDATGESQQEEIHRRADIALYKAKEAGRDQYC 455 Query: 141 YFEIPAEDSWLFIADGSDKELDSCALSPTIND-HFAFHPIVDPLSRRIIAFEAIVQKNED 199 +FE D+ L +++L P N + P V R I FEA+++ Sbjct: 456 FFEDEM-DAELKHKHKIERDLRQALQEPDKNGLRVVYQPQVSANGRHIRGFEALIRWEHP 514 Query: 200 -----SPSAIAVGQRKDGEIYTADLKSKALAFTMAHALELGDKMISINLLPMTLVNEPDA 254 SP + + D AF A L+ + +++N+ L ++ + Sbjct: 515 VRGNVSPVDFIPIAEETNLVIALDEFVMKEAFKTA--LKWPEVTMAVNVSAKEL-HQDNY 571 Query: 255 VSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGL 314 ++ + P+QI +E TES ++ A+ +K LKAAG +A+D FG G++ L Sbjct: 572 PHKIIALASEYNIRPDQIELEITESVLLEDSPRVAKTLKILKAAGFKIALDDFGTGYSSL 631 Query: 315 LLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLE 374 L R Q D++KI Q + ++ A++QAI+ SL + V+A GV T E+ L Sbjct: 632 SYLRRHQVDKLKIDQSFVASIGVREDASAVVQAILSLGESLGLSVTAEGVETIEQRDSLR 691 Query: 375 SAGIEMFQGDLFAKA 389 G QG LF+K Sbjct: 692 KRGCAYLQGYLFSKP 706 >UniRef50_C5S5K8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S5K8_CHRVI Length = 1069 Score = 294 bits (753), Expect = 4e-78, Method: Composition-based stats. Identities = 63/296 (21%), Positives = 119/296 (40%), Gaps = 20/296 (6%) Query: 116 KFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFA 175 + ++ ++ L L++ ++ F Sbjct: 774 TVTDLIQHADVAMYQAKEEGRNTYRFYTPS-----LTQTARERLGLEARLHRALASEEFV 828 Query: 176 --FHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTAD---LKSKALA 225 + +D R+I EA+V+ + + P + G I L+ Sbjct: 829 LHYQAQIDMRDGRLIGCEALVRWHSATEGLVAPDRFIPLAEETGLIVPLGEWVLRQACAD 888 Query: 226 FTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 A L D +++NL L PD V + ++ L E++ +E TES ++ + Sbjct: 889 CQSWRARGLTDLTVAVNLSGRQL-RSPDLVERVTRVLRETGLPAERLKLELTESMIMDQR 947 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 ++ E +++LKA G+ ++ID FG G++ L L R D +KI ++ + ++ + I Sbjct: 948 EQALERLRALKALGVRLSIDDFGTGYSSLAYLKRLPIDELKIDRDFVRDIPEDSSDMEIA 1007 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPE 401 II +L + V A GV TPE+ +L G QG LF + +P+ A+ + Sbjct: 1008 ATIIAMARNLRLNVIAEGVETPEQCDFLIRQGCTAGQGYLFGRP----LPAEAFAQ 1059 >UniRef50_Q2IV14 Diguanylate cyclase/phosphodiesterase n=4 Tax=Rhodopseudomonas palustris RepID=Q2IV14_RHOP2 Length = 673 Score = 294 bits (753), Expect = 4e-78, Method: Composition-based stats. Identities = 83/361 (22%), Positives = 131/361 (36%), Gaps = 31/361 (8%) Query: 38 GILLFNGSHFFQLLEGPEEQVKMIYRAICQDPRHYNIVELLCDYAPARRFGKAGMELFDL 97 G L G F ++ P++ + + IC VE D R AG+ ++ Sbjct: 316 GFLARPGGDEFSIVTQPDQAADAL-QEICSQVLRLCDVEFDIDGHAIRVGSTAGVSIYP- 373 Query: 98 RLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGS 157 G L + +R FE + + Sbjct: 374 -------------RDGDDAETL-IAHADVALYRAKNERRGSVCVFEPAMD-----LQIRE 414 Query: 158 DKELDSCALSPTINDHFA--FHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRK 210 + L ND F + P I+ FEA+++ SP+A + Sbjct: 415 KRALQRELALALQNDEFELHYQPQ-ATTKGEIVGFEALLRWRHPVRGMVSPAAFIPLAEE 473 Query: 211 DGEIYTADLKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPE 270 G I D A A + I++NL P+ D + +L + L P+ Sbjct: 474 TGLIGAIDEWVLRSACREAASWPKP-LAIAVNLSPLDFGRL-DVPALILQVLLETGLDPK 531 Query: 271 QIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQE 330 ++ VE TE +I F ++ +K G+ VA+D FGAG++ L L F D+IKI Q Sbjct: 532 RLEVEITEGVLIDDFSGAIGILRRIKNCGVRVAMDDFGAGYSSLSYLQSFPFDKIKIDQA 591 Query: 331 LITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 + + AI++AI+ L + V A GV T + +L S G QG L K Sbjct: 592 FTRKLEINPDSAAIVEAILSLAHRLNLPVIAEGVETESQLAFLASVGCGEVQGYLIGKPG 651 Query: 391 L 391 Sbjct: 652 P 652 >UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase sensor n=1 Tax=Thauera sp. MZ1T RepID=C4KA21_THASP Length = 1093 Score = 294 bits (753), Expect = 4e-78, Method: Composition-based stats. Identities = 57/278 (20%), Positives = 102/278 (36%), Gaps = 12/278 (4%) Query: 120 TYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPI 179 + +F + ++ EL S + H + P Sbjct: 802 LLKHADTAMYEAKESGRNAYRFFLPEMTQR-VTRRLQTEAELRKAIESGDLRLH--YQPQ 858 Query: 180 VDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTAD---LKSKALAFTMAHA 231 +D S R+ EA+V+ P + G I L+ L Sbjct: 859 IDAASGRVYGCEALVRWQHPERGLLPPDRFVPFAEQSGLIVPLGEWVLREACLQQVRWRD 918 Query: 232 LELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEA 291 L +++N+ + D V+ + + P +I +E TES ++ E + Sbjct: 919 AGLPPLDVAVNISALQFRRR-DFVATVARVLGETGADPARIELEITESALMDATPELVAS 977 Query: 292 IKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKC 351 L A G+++A+D FG G++ L L R R+KI + + + + AI A + Sbjct: 978 FDQLVALGLTLALDDFGTGYSSLSYLKRLPLRRLKIDRSFVDGLPDNPEDAAITSATLSL 1037 Query: 352 CTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 L ++V A GV T ++ +L G QG LF++ Sbjct: 1038 ARDLGMEVVAEGVETEDQRGYLCKRGCRAMQGYLFSRP 1075 >UniRef50_B1XXA0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XXA0_LEPCP Length = 771 Score = 294 bits (753), Expect = 5e-78, Method: Composition-based stats. Identities = 62/299 (20%), Positives = 119/299 (39%), Gaps = 10/299 (3%) Query: 98 RLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGS 157 ++ R + A F + + L + A +F + Sbjct: 436 QVPVRLSIGIARFAQDGASVDELMQHADLALYDAKASAPGSMKFFAPRMGEQVRRRL-VL 494 Query: 158 DKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDG 212 +++L ++ H + P VD + + FEA+++ PS G Sbjct: 495 ERDLREAIDKQQLSLH--YQPKVDLQTWEVTGFEALLRWRHPEHGNIPPSEFIPVAEDSG 552 Query: 213 EIYTADLKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQI 272 I A A ++IN+ P+ ++ + + + +KA+ L P ++ Sbjct: 553 LILPIGEWVLTQACQQAARWPAP-MQVAINISPVQVMAQ-NLPEAVGRALKASGLAPRRL 610 Query: 273 IVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELI 332 +E TES I+ + + +L+ G+ +A+D FG G++ L L RF D +KI + + Sbjct: 611 ELEITESVFINETRGTVDRLHALRKVGVQIALDDFGTGYSSLAYLRRFPFDTLKIDRAFV 670 Query: 333 TNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 V S +AI++ I+ SL + A GV P + L + G ++ QG L ++ Sbjct: 671 REVLLSRDARAIVRNILALAKSLRMSTVAEGVEEPAQASVLGNEGCDLVQGFLVSRPMP 729 >UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXC9_DESAC Length = 888 Score = 294 bits (753), Expect = 5e-78, Method: Composition-based stats. Identities = 62/280 (22%), Positives = 108/280 (38%), Gaps = 16/280 (5%) Query: 120 TYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFA--FH 177 F+ L + ++ + + L+ +H F Sbjct: 599 LLKCADAAMFKAKELGRDNYRFYTAGLNERASELL-----ALEGALRQAVDKNHLVVYFQ 653 Query: 178 PIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTAD---LKSKALAFTMA 229 P V+ SRRII EA+V+ SP + G I + L+ L Sbjct: 654 PQVELASRRIIGAEALVRWQHPENGMISPVDFIPMAEETGLIVSIGEWVLRQSCLQARQW 713 Query: 230 HALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFA 289 IS+N+ + D V + ++ L PE + +E TES +++ D Sbjct: 714 QVAGYPPMRISVNMSARQF-RQKDLVPMVRRILQETGLSPEYLDLEITESILMNDVDGAV 772 Query: 290 EAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAII 349 E + L + GI ++ID FG G++ L L +F +KI + + +V AI A+I Sbjct: 773 ERLVELHSLGIQLSIDDFGTGYSSLAYLKKFPIQYLKIDRSFVRDVIIDPNDAAIATAVI 832 Query: 350 KCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 ++ + V A G+ ++ +L G QG LF++ Sbjct: 833 DLARNMNLNVIAEGIEQQDQHQFLLDRGCGYGQGYLFSRP 872 >UniRef50_D1C8G6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C8G6_SPHTD Length = 760 Score = 293 bits (752), Expect = 5e-78, Method: Composition-based stats. Identities = 68/287 (23%), Positives = 116/287 (40%), Gaps = 20/287 (6%) Query: 118 QLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDK-ELDSCALSPTINDHF-- 174 + + R +L + F+ A ++ L+ F Sbjct: 458 EDLIRNADAAMHRAKLLGKARRVVFDPAM------YAQAVERLALERDLRHGLERGEFQI 511 Query: 175 AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTMA 229 + P++D +RR + EA+V+ + SP + G I A A Sbjct: 512 YYQPVLDVRTRRPVEVEALVRWHHPERGLISPGEFIPIAEETGLIVPLGHWVLAEACRQL 571 Query: 230 HALE--LGDKM---ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISR 284 A D +S+NL P + + + L P + +E TES ++ Sbjct: 572 AAWRTAFPDCAPSAVSVNLSARQF-RHPSLTADIAQILAETGLPPASLKLEITESVMMDD 630 Query: 285 FDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAI 344 EA++ LK G+ +A+D FG G++ L L RF D +KI + + +S QA+ Sbjct: 631 TASTLEALRDLKQLGVQLAVDDFGTGYSSLSYLKRFPTDAMKIDRSFARGLDQSREDQAL 690 Query: 345 IQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 ++A+I +L +QV+ GV T E+ +LE G ++ QG LFA Sbjct: 691 VEAMIAAANALRLQVTVEGVETEEQLEFLERVGCDLVQGFLFAPPMP 737 >UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZ89_CHRVO Length = 936 Score = 293 bits (752), Expect = 6e-78, Method: Composition-based stats. Identities = 69/265 (26%), Positives = 121/265 (45%), Gaps = 17/265 (6%) Query: 141 YFEIPAEDSWLFI-ADGSDKELDSCALSPTIN-----DHFA--FHPIVDPLSRRIIAFEA 192 + + +S+ F AD + + + A+ + D F + P V+ S RI+ EA Sbjct: 654 HAKSSGRNSYKFYTADLNARAREILAIESQLRFALERDEFVLHYQPQVEMESGRIVGAEA 713 Query: 193 IVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTM---AHALELGDKMISINLL 244 +++ N S P + G I A A L + ++INL Sbjct: 714 LIRWNHPSLGLLGPVRFIQVAEERGFIVQIGNWVIAEATRQLVEWRRAGLPELTLAINLS 773 Query: 245 PMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAI 304 + +PD + ++++ L + +E TES ++ + I ++K G+ ++I Sbjct: 774 ALQF-RQPDLALQVKQALESSGLPGHALDIEVTESIIMEDAQATIQTIDNMKNMGLRLSI 832 Query: 305 DHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGV 364 D FG G++ L L RF+ D++KI + + ++ + AI +AII +L +QV A GV Sbjct: 833 DDFGTGYSSLSYLKRFKADKLKIDRSFVRDIPQDADDSAIARAIINMAKNLNMQVVAEGV 892 Query: 365 ATPEEWMWLESAGIEMFQGDLFAKA 389 T E+W +LE G + QG L AK Sbjct: 893 ETMEQWQFLEQEGCDFVQGYLIAKP 917 >UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RJ77_9PROT Length = 1399 Score = 293 bits (752), Expect = 6e-78, Method: Composition-based stats. Identities = 62/323 (19%), Positives = 120/323 (37%), Gaps = 21/323 (6%) Query: 76 ELLCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLA 135 +LL APA R + + + G S L+ +R Sbjct: 1075 KLLEVMAPAYRIEQHELTC------SLSAGIAMYPADGESFEALSM-SADTAMYRAKQSG 1127 Query: 136 TEQSTYFEIPA-EDSWLFIADGSDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIV 194 +F E S + + +L + + H + P RR++ EA++ Sbjct: 1128 RNAYCFFTAEMQERSARNLQ--IENDLRRALENGELRLH--YQPQFTLADRRLVGAEALL 1183 Query: 195 QKNED-----SPSAIAVGQRKDGEIYTAD---LKSKALAFTMAHALELGDKMISINLLPM 246 + SP + G I L++ + L +++NL + Sbjct: 1184 RWQHPQLGMVSPVEFIPIAEECGLILPIGEWVLRAAVSQLRVWQQEGLPPMTVAVNLSAV 1243 Query: 247 TLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDH 306 + + + A L + + +E TES + + L+A G+ ++ID Sbjct: 1244 QF-RQASLTDVVSRILDAEGLAAQFLELELTESVAMDNPLAAIATMDKLRALGVRMSIDD 1302 Query: 307 FGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVAT 366 FG G++ + L RF+ ++KI + + ++ +AI+ A I L +Q A GV + Sbjct: 1303 FGTGYSSMSYLKRFRVHKLKIDRSFVADLAADPEDEAIVTATISLARDLGLQTIAEGVES 1362 Query: 367 PEEWMWLESAGIEMFQGDLFAKA 389 + +L + G + QG LF++ Sbjct: 1363 EAQLAFLRAKGCDEAQGYLFSRP 1385 >UniRef50_B7GID3 Multidomain signal transduction protein (Contains GGDEF and EAL domains) n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GID3_ANOFW Length = 552 Score = 293 bits (752), Expect = 6e-78, Method: Composition-based stats. Identities = 68/308 (22%), Positives = 123/308 (39%), Gaps = 18/308 (5%) Query: 93 ELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYF--EIPAEDSW 150 +L D L + +VF + + L ++ E+ + Sbjct: 234 QLTDQELTITPSIGVSVFPDDATDWTTLLSFADLALEIAKENGGNTYCFYTNELKKTNEE 293 Query: 151 -LFIADGSDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAI 204 L+I K L + PIVD + I+A EA+++ SP+ Sbjct: 294 KLYIQHSIRKALKQ------NEFTLHYQPIVDIQTGDIVAVEALLRWFHPKRGWISPATF 347 Query: 205 AVGQRKDGEIYTAD---LKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNE 261 + I L++ L I +N+ + + D V + + Sbjct: 348 IPIAEETNLIQPIGDWVLRNVCEQSKKWKEKGLPHVQIGVNVSIKQFL-QADLVKHIEHV 406 Query: 262 IKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQ 321 ++ L P + +E TES + D ++SLK G+ +A+D FG G++ L L + Sbjct: 407 LRTYDLDPFCLKLEITESMAMHHIDYVLAQLQSLKHLGLQLAVDDFGTGYSSLNYLKKLP 466 Query: 322 PDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMF 381 D IKI + + ++ K +I++A+I+ SL+++V A GV T E+ L+ G + Sbjct: 467 VDIIKIDRSFVQDMVKHSYDLSIVRAVIQVAHSLQMKVVAEGVETEEQLAILKREGCDRA 526 Query: 382 QGDLFAKA 389 QG F+K Sbjct: 527 QGYYFSKP 534 >UniRef50_B8HNE5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HNE5_CYAP4 Length = 877 Score = 293 bits (751), Expect = 7e-78, Method: Composition-based stats. Identities = 63/292 (21%), Positives = 117/292 (40%), Gaps = 15/292 (5%) Query: 121 YDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPIV 180 + + +R + F S L + + +L + + PI+ Sbjct: 580 LRNADIAMYRAKAAGGSRHVLFTSVMHTSAL-VRLQLETDLRQALERQEL--RLQYQPIL 636 Query: 181 DPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTMAHALELG 235 + +I+ FEA+V+ +P + G I A Sbjct: 637 CLNTDQIVGFEALVRWQHPRDGLIAPGHFITVAEETGLIVPIGEWVLQEACRQMQCWHTQ 696 Query: 236 -----DKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAE 290 M+S+NL L ++PD + + + L P+Q+ +E TES ++ + + Sbjct: 697 FGQVLPLMVSVNLSSKQL-SQPDLLQQVDRMLAETGLRPQQLKLEITESMILDNTEVARQ 755 Query: 291 AIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIK 350 + LK I +++D FG G++ L L R D +KI + I + + +++AII Sbjct: 756 TLLKLKERQIQLSMDDFGTGYSSLNYLHRLPIDLLKIDRSFIHEMDSGEESRELVRAIIS 815 Query: 351 CCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEK 402 SL++QV A G+ T + L G E QG LF+ L+ P+ + ++ Sbjct: 816 IAHSLKMQVIAEGIETRSQLEQLHELGCEFGQGYLFSTP-LDPEPAADFLQQ 866 >UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KA22_AZOSB Length = 1006 Score = 293 bits (751), Expect = 7e-78, Method: Composition-based stats. Identities = 61/286 (21%), Positives = 109/286 (38%), Gaps = 18/286 (6%) Query: 115 SKFQLTYDDRALQFFRTFVLATEQSTYFEIPAE---DSWLFIADGSDKELDSCALSPTIN 171 + F + ++ +F + L +A+ LD S Sbjct: 703 TDFDTLSRNADAAMYQAKREGRNGFRFFTEAMQARSTRTLLLANALRHALDRGQFS---- 758 Query: 172 DHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAF 226 + P V R++ EA+++ SP +G I A Sbjct: 759 --LHYQPQVSLADGRVVGAEALLRWTHPEFGPVSPGEFVPIAESNGLIAQIGEWVLREAV 816 Query: 227 TMAHAL---ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVIS 283 + L ++++NL N P+ + I+ L P Q+ +E TE+ + Sbjct: 817 AQSRRWLDEGLPPLVMAVNLSAAQFRN-PNLPELVSQVIEEAGLPPHQVELELTEAVAMD 875 Query: 284 RFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQA 343 + +L A GI ++ID FG G++ L L RF+ ++KI Q + ++ +A Sbjct: 876 DPQSAVRVMDALFARGIRMSIDDFGTGYSSLGYLKRFKVGKLKIDQSFVRDIGDDPDDKA 935 Query: 344 IIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 I+ AII SL + A GV T ++ +L G + QG F++ Sbjct: 936 IVSAIIHLAGSLGMLTVAEGVETLDQLDFLRQQGCDTVQGYYFSRP 981 >UniRef50_A5PE71 Sensory box/GGDEF family protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PE71_9SPHN Length = 749 Score = 293 bits (751), Expect = 7e-78, Method: Composition-based stats. Identities = 73/364 (20%), Positives = 138/364 (37%), Gaps = 36/364 (9%) Query: 38 GILLFNGSHFFQLL---EGPEEQVKMIYRAICQDPRHYNIVELLCDYAPARRFGKAGMEL 94 G++ G F +L E + I I ++ R ++E G+ Sbjct: 400 GLVARLGGDEFAVLLQDENLDHVAMTIAHRIMENLRDPYVIEGSEICIGT----SIGVAF 455 Query: 95 FDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIA 154 D + D++ L +R L + FE S L Sbjct: 456 ADPQGPSASDLM---------------KHADLALYRAKELGRGKVVVFE-----SALVEF 495 Query: 155 DGSDKELDSCALSPTIND--HFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVG 207 + +EL+ + + F P++D + +I+ +EA+V+ + P Sbjct: 496 ALARRELEMDLRTALTDGDLRLHFQPLMDLQTNKILGYEALVRWHHPERGLILPDEFIPL 555 Query: 208 QRKDGEIYTADLKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANAL 267 + G I A A L G+ ISINL P L ++ +++ + + Sbjct: 556 AEQTGLIVELGEWVIREAAATARLLP-GELTISINLSPAQL-RSSQLLATVVSAVAHAGI 613 Query: 268 VPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKI 327 P ++ +E TE + ++ ++ L+ G+ +A+D FG G++ L RF + IKI Sbjct: 614 APSRLELEITEGVFLEDSEDCMRILRELRTFGVRIALDDFGTGYSSFGYLRRFPFNTIKI 673 Query: 328 SQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFA 387 + + + +S + I++AI + + V+A G+ + L G E+ QG L Sbjct: 674 DRSFVAELRESDDCRRIVRAISDLAHGMGMSVTAEGIEDVSQLSMLRDLGCEVGQGFLLG 733 Query: 388 KAKL 391 K Sbjct: 734 KPMP 737 >UniRef50_B2UJ08 Diguanylate cyclase/phosphodiesterase n=5 Tax=Ralstonia RepID=B2UJ08_RALPJ Length = 670 Score = 293 bits (751), Expect = 8e-78, Method: Composition-based stats. Identities = 72/329 (21%), Positives = 126/329 (38%), Gaps = 28/329 (8%) Query: 95 FDLRLHE---RDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWL 151 F L LH+ V +++ Q+ + + + F + Sbjct: 320 FSLDLHQIYVTASVGVSLYPHDARDVQVLTRNADTAMYHAKNHGKNAAASFTSEMDQQAR 379 Query: 152 FIADGSDKELDSCALSPTINDHFAFHPIVDPLSR----------RIIAFEAIVQKNEDS- 200 + +L + A+ P V + + EA+V+ Sbjct: 380 RRLR-VEADLRRALDREELL--LAYQPQVRLSTDDAHDAVISRANVYGVEALVRWRHPEI 436 Query: 201 ----PSAIAVGQRKDGEIYTADLKSKALAFTMAHALELGD---KMISINLLPMTLVNEPD 253 P + G I L A A D +++NL +P Sbjct: 437 GLIGPGEFIAVAEETGLIVPLGLWVLRTACQQAVRWMREDGVTLRVAVNLSARQ-TRDPA 495 Query: 254 AVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAG 313 V +++ ++ + P Q+ +E TES ++ + ++SL AAGIS++ID FG G++ Sbjct: 496 LVENVMDVLRETGMPPHQLELEITESVLMEDIEANIALLESLHAAGISLSIDDFGTGYSS 555 Query: 314 LLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWL 373 L L RF ++KI + + + G AI A+I SL +QV A GV PE+ L Sbjct: 556 LAYLQRFPIQKLKIDRSFVQRMPGDGE--AIAGAVIAMAHSLRMQVVAEGVEDPEQLALL 613 Query: 374 ESAGIEMFQGDLFAKAKLNGIPSIAWPEK 402 AG ++ QG LF++ + +AW + Sbjct: 614 RDAGCDLGQGYLFSRPQ-QADALMAWLNR 641 >UniRef50_A3J7L9 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Marinobacter sp. ELB17 RepID=A3J7L9_9ALTE Length = 564 Score = 293 bits (751), Expect = 8e-78, Method: Composition-based stats. Identities = 61/270 (22%), Positives = 109/270 (40%), Gaps = 17/270 (6%) Query: 135 ATEQSTYFEIPAEDSWLFIADGSDK------ELDSCALSPTINDHF--AFHPIVDPLSRR 186 A + + +++ G D+ EL++ F + P +D +S R Sbjct: 282 ARSAMSAIKEQGGNNYRHFVAGGDQAFDDGLELETSLRQALGQKQFRLYYQPQIDIVSGR 341 Query: 187 IIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTMAHALELGDKMISI 241 ++ EA+++ + + P K G I L + +++ Sbjct: 342 VLGLEALLRWHHPTQGMIAPDRFIPLAEKTGLIIPIG--EWVLREACSQVATQHGLKVAV 399 Query: 242 NLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGIS 301 NL ++ D V+ + + + P + +E TES +I + ++ L G+S Sbjct: 400 NLSARQF-HQKDLVAMIRRILDETGMPPVNLELEITESALIYDVELAIATMEQLNDLGVS 458 Query: 302 VAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSA 361 V++D FG G++ L L RF D +KI + I V I++ II SL ++V A Sbjct: 459 VSLDDFGTGYSSLSYLKRFPIDMLKIDKSFIDEVTTDPDSNVIVKTIIVMAHSLGLKVIA 518 Query: 362 MGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 GV T + L G + QG L A+ L Sbjct: 519 EGVETK-QLTMLREHGCDQAQGYLIARPLL 547 >UniRef50_B8DLW6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Desulfovibrio RepID=B8DLW6_DESVM Length = 739 Score = 293 bits (750), Expect = 9e-78, Method: Composition-based stats. Identities = 60/279 (21%), Positives = 105/279 (37%), Gaps = 16/279 (5%) Query: 120 TYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFA--FH 177 + + +R + F D ++ ND F + Sbjct: 436 LLKNAEIAMYRAKEQGGARFRRFTQAMND-----DVTRRLAIEKSIRKGLENDEFVVFYQ 490 Query: 178 PIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTMAHAL 232 P VD ++ ++ EA+V+ P G + + A Sbjct: 491 PRVDIVTGQVTGMEALVRWARPDGTLVPPLEFIPVAEDTGLVVALGERVLRDACIQTRRW 550 Query: 233 --ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAE 290 ELG I++N+ +PD + + + + L P Q+ +E TE+ ++ Sbjct: 551 TDELGPLRIAVNISARQF--QPDLLDRVQAALAESGLPPSQLELEITETTMMRDLPTSVA 608 Query: 291 AIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIK 350 ++ L A GIS+AID FG G + L L F D IKI + + +V I+ I+ Sbjct: 609 ILERLAAQGISIAIDDFGTGHSSLYYLKNFPIDTIKIDRSFVRDVPGDEGDATIVSTIVT 668 Query: 351 CCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 +L + V A GV T ++ +L + G QG ++K Sbjct: 669 MGRNLSLNVVAEGVETDDQLGFLRAHGCREVQGYYYSKP 707 >UniRef50_Q9ABX9 Uncharacterized signaling protein CC_0091 n=3 Tax=Caulobacter RepID=Y091_CAUCR Length = 809 Score = 293 bits (750), Expect = 9e-78, Method: Composition-based stats. Identities = 64/283 (22%), Positives = 114/283 (40%), Gaps = 14/283 (4%) Query: 116 KFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF- 174 + + + +R +F+ +D+ + L ++ Sbjct: 508 TAEALMANADMALYRAKESGRGVYRFFKREMDDT-----IRERRNLARDLRQGIADNELI 562 Query: 175 -AFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTM 228 + P+ + FEA+V+ + P ++G I A Sbjct: 563 VHYQPLARAADGEVCGFEALVRWKHPTRGMIPPLDFIPVAEENGLIEALGDWVLRRACAD 622 Query: 229 AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEF 288 A A E I++NL P+ L N P + + + L P ++ +E TES + + Sbjct: 623 AAAWEKP-LRIAVNLSPIQLHN-PALPTLVHEVLITTGLSPSRLELEITESALFKDYQRA 680 Query: 289 AEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAI 348 + ++ LKA G+ +A+D FG GF+ L L F D+IKI + + N+H+ AI++A+ Sbjct: 681 LDNLRRLKALGVRIAMDDFGTGFSSLSTLQSFPFDKIKIDKSFVENIHRHDRATAIVRAV 740 Query: 349 IKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 + SLEI V A GV T E+ ++L QG + Sbjct: 741 LGLGRSLEIPVVAEGVETEEQILFLRGEDCAELQGYAIGRPAP 783 >UniRef50_A2SDI4 Signal transduction protein n=2 Tax=Proteobacteria RepID=A2SDI4_METPP Length = 1006 Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats. Identities = 64/294 (21%), Positives = 121/294 (41%), Gaps = 17/294 (5%) Query: 120 TYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF--AFH 177 +R+ + +F +D A + +L++ F + Sbjct: 714 LMKRADAAMYRSKREGRNRYHFFSKAVDD-----AASARLQLEADMRRALAAGQFIVHYQ 768 Query: 178 PIVDPLSRRIIAFEAIVQK-----NEDSPSAIAVGQRKDGEIYTAD---LKSKALAFTMA 229 P+V +R +A EA+++ SP+ + G I L+ Sbjct: 769 PVVHGRTRDAVAVEALLRWDRAGQGLQSPAVFIPVAEESGLIVPMGHWVLRQACEQLRAW 828 Query: 230 HALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFA 289 LG +++N+ P+ L + D V + + + A + ++ E TES ++ + Sbjct: 829 SGTALGGISVAVNVSPVQLA-QADFVDTVADVLHATGVDGSRLEFEITESTLMQDPEATL 887 Query: 290 EAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAII 349 E ++ LK G+ +AID FG G++ L L RF D +KI + ++ + +++AI+ Sbjct: 888 EMLRRLKGLGVRIAIDDFGTGYSSLGHLKRFPVDTLKIDHTFVRDLEADADDRELVRAIL 947 Query: 350 KCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEKK 403 SL + V A GV T + L + FQG LFA+ + + AW + + Sbjct: 948 AMARSLRLHVVAEGVETEAQAAILAAMECPAFQGYLFARPAGAAV-TAAWLQDR 1000 >UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K234_DESAC Length = 766 Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats. Identities = 66/300 (22%), Positives = 115/300 (38%), Gaps = 12/300 (4%) Query: 98 RLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGS 157 L + +++ + + + ++ F D+ A Sbjct: 451 ELRITTSIGASLYPRDGEQSEDLLRHADAAMYQAK-KQGGNGFQFCSEEMDTRAHKALEL 509 Query: 158 DKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDG 212 + +L + H + P V S +I EA+V+ N SP + G Sbjct: 510 EGDLRQALQLGSFVLH--YQPKVKIASGKIDGCEALVRWNHPDKGMISPDDFIPLAEETG 567 Query: 213 EIYTAD---LKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVP 269 I L+ F A L I++NL + + D V + + + P Sbjct: 568 LIIALGEWVLREACRQFKAWQAQGLPPIKIAVNLSARQFL-QSDFVESIQTILHEFDIDP 626 Query: 270 EQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQ 329 + +E TES V+ D A+ + LK G ++++D FG G++ L L RF D +KI + Sbjct: 627 HWLDLELTESMVMEDPDRIAKLLAELKQIGFALSLDDFGTGYSSLNYLRRFPIDCLKIDR 686 Query: 330 ELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 I +V ++ ++I SL I A GV T E++ +L + QG LF+K Sbjct: 687 SFILDVASDATAASVANSVIGIAHSLGIHAIAEGVETREQYAFLAMCECDSIQGYLFSKP 746 >UniRef50_A0NRC3 Sensory box/GGDEF family protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NRC3_9RHOB Length = 830 Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats. Identities = 75/329 (22%), Positives = 136/329 (41%), Gaps = 26/329 (7%) Query: 74 IVELLCDY--APARRFGKAGMELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRT 131 +V + R F G + RLH+ D + + K + ++ Sbjct: 491 LVAVTRKPFRIGRRDFA-IGATVGFTRLHDSKDTVDDLMRK-----------ADIALYKA 538 Query: 132 FVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFE 191 +S FE E + + +L +N F PIVD S ++++ E Sbjct: 539 KEGGRGRSLAFEQDME-REVRERRELESDLREAFEYGKLN--VDFQPIVDARSGKVVSSE 595 Query: 192 AIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTMAHALELGDK-MISINLLP 245 +V+ P G I L S L A A + + +++NL P Sbjct: 596 VLVRWLHPVRGEVRPDVFIPIAEHAGLILP--LGSWVLKKACAAAAQCPELESVAVNLSP 653 Query: 246 MTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAID 305 + ++ P+ V +L ++ PE++++E TES + F + ++ L+ GI +A+D Sbjct: 654 VQFMD-PNLVEQILGVLQETGFPPERLVLEITESVFLRDFGTASIKLQKLRDLGIRIALD 712 Query: 306 HFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVA 365 FG G++ L L ++ D+IKI + + + + AII A+I +L ++V+A GV Sbjct: 713 DFGTGYSSLSYLRHYKFDKIKIDKSFVDEIGERSDGLAIISAVIALAHNLGLEVTAEGVE 772 Query: 366 TPEEWMWLESAGIEMFQGDLFAKAKLNGI 394 + L + G + QG F K N + Sbjct: 773 RQFQVDALRTLGCDTMQGYYFGKPDPNPM 801 >UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ATC4_PELPD Length = 876 Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats. Identities = 54/282 (19%), Positives = 106/282 (37%), Gaps = 12/282 (4%) Query: 116 KFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFA 175 + + + +F +S + + L H Sbjct: 569 TAEKLLKNADTAMYHAKEEGRNTYQFFSEEM-NSRVSERLSMETGLRHALARNEFLLH-- 625 Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTAD---LKSKALAFT 227 + P V+ + RI+ EA+++ + P A + G I L++ Sbjct: 626 YQPRVNTTTGRIVGVEALIRWQQPQKGLILPDAFIPLAEETGLIIPIGEWVLRNTCTQAR 685 Query: 228 MAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDE 287 IS+N+ ++ + + ++ L P + +E TES ++ + Sbjct: 686 AWQEAGFAQMRISVNISCRQFTHD-NLPDTIRGILRETGLQPSCLELEITESVIMLNPER 744 Query: 288 FAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQA 347 + LK GIS+AID FG G++ L LL R D +KI + ++ + + + ++ Sbjct: 745 AISLLNELKEMGISIAIDDFGTGYSSLSLLKRLPADILKIDKSFVSGIPGNKSDETLVAT 804 Query: 348 IIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 II ++ + + A GV E+ +LE + QG F+K Sbjct: 805 IINLGHNMGLGLVAEGVERQEQLHFLEERNCQEVQGYYFSKP 846 >UniRef50_B1XZW3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=cellular organisms RepID=B1XZW3_LEPCP Length = 1069 Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats. Identities = 63/312 (20%), Positives = 120/312 (38%), Gaps = 12/312 (3%) Query: 98 RLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGS 157 +H V +VF + ++ + +F Sbjct: 743 EIHVSCSVGISVFPDDAQDIDELMRQADVAMYQAKAQGRNGAQFFTAEMNQRAQARL-MV 801 Query: 158 DKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDG 212 + L S ++ H + P + R+ E +++ + P + G Sbjct: 802 ENHLRSAVAQGQLSLH--YQPRIHVADGRVAGVEGLLRWHSPELGHVPPDRFIPVAEETG 859 Query: 213 EIYTADLK---SKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVP 269 I + L + +SINL + L +P + L ++ +A+ P Sbjct: 860 LIIEIGAWVIEAACAQIERWRGQGLQEVAVSINLSALQL-RDPGLLDVLRASLERHAVPP 918 Query: 270 EQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQ 329 Q+ +E TES ++ + D + +L+ G+ ++ID FG G++ L L+RF D++KI + Sbjct: 919 GQLELELTESILMDQVDAHLVTLHALRELGLRLSIDDFGTGYSSLNYLTRFPIDQLKIDR 978 Query: 330 ELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 + ++ AII+AII +L ++V A GV E L +AG + QG FA+ Sbjct: 979 SFVRDMLDDPRDLAIIKAIIGLGHTLGLKVVAEGVERELEVQALRAAGCDELQGYHFARP 1038 Query: 390 KLNGIPSIAWPE 401 + + Sbjct: 1039 MAADTATAWLLD 1050 >UniRef50_A1TM11 Diguanylate phosphodiesterase n=82 Tax=Bacteria RepID=A1TM11_ACIAC Length = 332 Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 77/244 (31%), Positives = 119/244 (48%), Gaps = 2/244 (0%) Query: 159 KELDSCALSPTINDHFAFHPIVDPL-SRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTA 217 + A + AF PIVD + A+EA+V+ + SP+A + + DG Y Sbjct: 40 SACRNGAAELDFDFTMAFQPIVDLRHGGSVFAYEALVRGTDGSPAASVLARVNDGNRYAF 99 Query: 218 DLKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFT 277 D + A +A L + D +SIN LP + + L + E+II E Sbjct: 100 DQACRVRAVELAARLGI-DCRLSINFLPNAVYQPEACIRVTLEAARRCGFPVERIIFEVA 158 Query: 278 ESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHK 337 E E + +++ + G+ AID FGAG+AGL LL+ FQPD +KI L+ + Sbjct: 159 EHENAHDREHLNRILRAYRRQGLRTAIDDFGAGYAGLGLLADFQPDMLKIDMALVRGIGA 218 Query: 338 SGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSI 397 RQAI + ++ +L I V A GV T +E L + G+ ++QG LFA+ L +P + Sbjct: 219 DPVRQAIARGVVSMGEALGIAVIAEGVETEDELRPLRAMGVHLYQGYLFARPALEALPDV 278 Query: 398 AWPE 401 WP+ Sbjct: 279 QWPQ 282 >UniRef50_B1LTA1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1LTA1_METRJ Length = 801 Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 62/273 (22%), Positives = 121/273 (44%), Gaps = 11/273 (4%) Query: 124 RALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPIVDPL 183 L + F+ E+ + +LD A + P+VD Sbjct: 492 ADLALYAAKADGKGCWRTFDPSLEER---VVRQRQFDLDMRAALAAGEMELHYQPLVDMR 548 Query: 184 SRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTMAHALELGDKM 238 S R+ FEA+++ N+ SP I G I ++ AL A D Sbjct: 549 SGRVAGFEALLRWNKPGYGWVSPGEIIPIAETTGFIV--EIGRWALRRACTDARTWSDLK 606 Query: 239 ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAA 298 I++N+ + + P + + ++ L P+++ +E TES ++ E E +K L+A Sbjct: 607 IAVNISSIHV-RMPGFHAEVAAVLRETGLAPDRLEIEITESVLLDHGPEVLENLKRLRAT 665 Query: 299 GISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQ 358 G+ +A+D FG G++ L L+ F D++K+ + + ++ + A+++AI + +L + Sbjct: 666 GVRIALDDFGTGYSSLSYLTEFPFDKVKVDRSFVRDLQGRPEKVAVVEAIARMARALSMS 725 Query: 359 VSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 V+ GV T ++ L ++ QG L++ A+ Sbjct: 726 VTVEGVETRQQLDVLRDKRCDIAQGFLYSPARP 758 >UniRef50_C6E011 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=C6E011_GEOSM Length = 869 Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 56/302 (18%), Positives = 112/302 (37%), Gaps = 16/302 (5%) Query: 98 RLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGS 157 L+ + +V+ Q + L + +F + + + Sbjct: 553 ELNITPSIGISVYPTDGETVQELMKNADLAMYHAKSAGRNSYQFFT-----QEMNLTVQA 607 Query: 158 DKELDSCALSPTINDHF--AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRK 210 L+S + D + P +D S ++ EA+++ +P Sbjct: 608 RLVLESDLRTALERDEMMLHYQPQIDLKSGEVVGVEALLRWRHPVRGAVAPDVFIPVAED 667 Query: 211 DGEIYTAD---LKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANAL 267 G I + LKS + + L +++NL + + S L + + A + Sbjct: 668 TGLILSIGEFALKSACEQLALWISQGLSPLRMAVNLSARQF-KQSNLPSLLADILAATGV 726 Query: 268 VPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKI 327 + +E TES + + +++L+ G+ +AID FG G++ L L F +R+KI Sbjct: 727 AAHLLELEITESSAMDDPNTAIVHLRTLREMGVELAIDDFGTGYSSLSYLKLFPVNRLKI 786 Query: 328 SQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFA 387 + + + I A I +L +V A GV T + +L ++ QG F+ Sbjct: 787 DRSFVRGIDTDSEDAEIAAATIALAHNLGKEVVAEGVETEAQCRFLRGQQCDILQGYFFS 846 Query: 388 KA 389 + Sbjct: 847 EP 848 >UniRef50_A0YBW6 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YBW6_9GAMM Length = 799 Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 60/290 (20%), Positives = 112/290 (38%), Gaps = 18/290 (6%) Query: 115 SKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF 174 + + + L F +F + + I L N F Sbjct: 495 TDAKTIIKNADLALFHAKDNGRNNYQFFTVE-----MNIQLIDRVALTHDLKQAVKNSDF 549 Query: 175 --AFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFT 227 + P + ++ FEA+++ N P+ + G I A Sbjct: 550 TLVYQPKICLKQGNLVGFEALIRWNHKIRGAVGPTEFIPVAEQTGLIIPLGRWVITTACE 609 Query: 228 MAHALELGDKM-----ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVI 282 + + + +++NL +E V F+ + I + P Q +E TES ++ Sbjct: 610 QLRTMYDEEIVNDSVSMAVNLSAHQFQDE-HLVDFIRDRINTFDIKPGQFEIELTESVLM 668 Query: 283 SRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQ 342 FD E +++L+ GI ++ID FG G++ L L R + +K+ + +T++ Sbjct: 669 ENFDNAIEKLEALRQLGIQISIDDFGTGYSSLGYLKRLPVNTVKVDRSFVTDIPNDKSDM 728 Query: 343 AIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLN 392 I A+I +L V A GV T ++ +LE +G + QG F+K + Sbjct: 729 EITSAVIAMAHNLNYTVVAEGVETEQQLQFLEHSGCDYGQGYFFSKPLPD 778 >UniRef50_A1ASF8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ASF8_PELPD Length = 1023 Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 59/275 (21%), Positives = 108/275 (39%), Gaps = 14/275 (5%) Query: 126 LQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDK-ELDSCALSPTINDHF--AFHPIVDP 182 +Q + Q+ S ++ +++C L F + P V+ Sbjct: 350 MQNAHIAMNQARQAGI--PLQFYSESMNRKAMERFAIETCMLRAIDAGEFFLCYQPKVEI 407 Query: 183 LSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTAD---LKSKALAFTMAHALEL 234 ++ EA+V+ P ++G I L L Sbjct: 408 HDMKLTGVEALVRWQRPGEGVIPPDRFIALAEENGMIVRLGGWILGEACRQNRAWQDAGL 467 Query: 235 GDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKS 294 ++S+N+ L E V + ++ L P + +E TES V++ DE + + Sbjct: 468 PRTVVSVNISARQL-RENSFVEQVERILEETGLEPCYLDLELTESVVMANSDEIVQKLTR 526 Query: 295 LKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTS 354 LK G+ +++D FG G++ L L D IK+ + + ++ +AI++A+I + Sbjct: 527 LKQLGVGISVDDFGTGYSSLSYLKHLPVDTIKVDRSFVRDIVHDPDDKAIVEAVIAMGHA 586 Query: 355 LEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 L + V A GV T E+ +L S QG F+K Sbjct: 587 LGLTVIAEGVETLEQLEFLRSQNCNQAQGYYFSKP 621 >UniRef50_Q0EWZ7 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EWZ7_9PROT Length = 1217 Score = 292 bits (748), Expect = 1e-77, Method: Composition-based stats. Identities = 66/287 (22%), Positives = 117/287 (40%), Gaps = 20/287 (6%) Query: 120 TYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSD------KELDSCALSPTINDH 173 D R + A Q + +D++ F + + +L IN Sbjct: 912 PNDGRDFNRLISQSEAALQKA--KAAGKDTYNFFTEQMNINALEHMQLQGQLRHAIINQE 969 Query: 174 F--AFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAF 226 F + P +D L+ R+I EA+V+ P + G I A Sbjct: 970 FRIYYQPQIDTLNERMIGAEALVRWQHPQHGLVPPLKFIPLAERSGLIIPLGEWVLNEAC 1029 Query: 227 TMAHALE----LGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVI 282 A + ++++NL + + V ++ ++ + L E + +E TES ++ Sbjct: 1030 RQAQVWRKRNRMPSMVMAVNLSAVQFKR-GNIVETVIQALERSGLPAENLELELTESILL 1088 Query: 283 SRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQ 342 + E + LK GI ++ID FG G++ L L R D++KI Q + ++ Sbjct: 1089 DDVEVVMETLHRLKDIGIKLSIDDFGTGYSSLSYLKRLAVDKLKIDQSFVRDMVVDPEDA 1148 Query: 343 AIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 AI+ AII+ +L++ V A GV T + L+S QG LF++ Sbjct: 1149 AIVSAIIQLGHTLQLTVIAEGVETRAQLQLLKSLECNEVQGYLFSRP 1195 >UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GMU1_THISH Length = 862 Score = 292 bits (748), Expect = 1e-77, Method: Composition-based stats. Identities = 59/287 (20%), Positives = 103/287 (35%), Gaps = 18/287 (6%) Query: 118 QLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTIN---DHF 174 + + ++ + ++ L L + Sbjct: 576 EDLVRHADSAMYLAKAQGGAGYRFYTPDMNTRAM------ERLLLQNQLHQALELGQFQV 629 Query: 175 AFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTAD---LKSKALAF 226 + P +D S RI EA+V+ P+ G I L++ A Sbjct: 630 HYQPQMDLRSGRICGVEALVRWQHPERGLVPPAEFIPMAEDTGLIEPLGEWVLRTAAREV 689 Query: 227 TMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFD 286 L +S+NL P PD + + + L E++ +E TE +I + Sbjct: 690 RGWQDRGLPALNLSVNLSPRQF-RHPDLPGMVERVLAESGLEAERLELEITERLIIVDLE 748 Query: 287 EFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQ 346 + + + G+ V+ID FG G + L L R +KI +E + + + AI + Sbjct: 749 HTVDTLSRIARLGVRVSIDDFGTGHSSLAYLKRLPVHALKIDREFVDGIGQDSDDAAIAE 808 Query: 347 AIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNG 393 A+I +L +QV A GV T E+ +L G + QG A+ G Sbjct: 809 AVIALGRTLRLQVIAEGVETREQASFLREHGCDAVQGFFIARPMPAG 855 >UniRef50_Q1YJA6 Putative diguanylate cyclase n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YJA6_MOBAS Length = 834 Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats. Identities = 64/278 (23%), Positives = 115/278 (41%), Gaps = 15/278 (5%) Query: 121 YDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFA--FHP 178 + + +R +FE + + ++L+ N+ FA + P Sbjct: 519 IKNADVALYRAKSEGRGTFRFFEPDMDAGL-----EARRQLELDLRLAVENEEFALFYQP 573 Query: 179 IVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTMAHALE 233 VD + + FEA+++ + SP+ G + + A A A Sbjct: 574 FVDVERQVVTGFEALLRWHHPQRGLVSPAEFIPVAEDCGLMASIGAWVLETACRQAAAWP 633 Query: 234 LGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIK 293 + +S+NL P+ +P + + L E++ VE TES ++ ++ Sbjct: 634 -SELAVSVNLSPVQF-RDPGLADIVEAALARAGLASERLRVEVTESLLLQHSATVLATLE 691 Query: 294 SLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCT 353 + GI +++D FG G++ L LSRF D+IKI Q + N+ AII+A+I Sbjct: 692 RFRDQGIGISMDDFGTGYSSLGYLSRFPFDKIKIDQSFVRNLD-DRENMAIIRAVIGLSR 750 Query: 354 SLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 ++++ V A GV T + L G QG F++ K Sbjct: 751 AMDLSVIAEGVETAAQRDILLREGCREMQGYFFSRPKP 788 >UniRef50_B5VVW5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Arthrospira maxima CS-328 RepID=B5VVW5_SPIMA Length = 852 Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats. Identities = 62/282 (21%), Positives = 110/282 (39%), Gaps = 18/282 (6%) Query: 120 TYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF--AFH 177 D +R L + + + L +L++ N F + Sbjct: 560 LLRDAHTAMYRAKALGNSRYQVYISTMKSHALQQL-----QLEADLREAIKNQEFQLYYQ 614 Query: 178 PIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLK-----SKALAFT 227 PI++ + +I FEA+V+ SP + G I + LA Sbjct: 615 PIMNLKTNQIAGFEALVRWISPQRGFVSPGEFIPVSEESGLIIPLGEWILLEGCRQLAIW 674 Query: 228 MAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDE 287 + M+SINL ++ + + + + + I +E TES ++ DE Sbjct: 675 NQKYCQNPPFMLSINLSTRQF-SQVNLIECVDQILTQTGVDRSCIKLEITESAIMDDVDE 733 Query: 288 FAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQA 347 ++ LKA GI +++D FG G++ L L RF D +K+ Q + + S I++ Sbjct: 734 AIALLERLKALGIKLSMDDFGTGYSSLSYLHRFPIDTLKVDQSFVRRMDDSQQNTEIVKT 793 Query: 348 IIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 II +L + + A G+ T L++ E QG F+K Sbjct: 794 IIMLGHNLNMDIVAEGIETEGNVQTLKNLNCEYGQGYFFSKP 835 >UniRef50_A6X5M4 Diguanylate cyclase/phosphodiesterase n=2 Tax=Rhizobiales RepID=A6X5M4_OCHA4 Length = 786 Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats. Identities = 62/288 (21%), Positives = 114/288 (39%), Gaps = 13/288 (4%) Query: 124 RALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPIVDPL 183 + +R ++ D + + +L + I+ A+ P+ Sbjct: 496 ADIALYRAKTEGRGMVAFYSPEM-DREIRERRQMEADLRHAMVRGQISI--AYQPLFATA 552 Query: 184 SRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTMAHALELGDKM 238 +EA+V+ N P + G I A A E Sbjct: 553 DGSCTGYEALVRWNHPERGQIPPEVFVPIAEETGVIVPLGEWVLREACRTAAGWEKH-LT 611 Query: 239 ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAA 298 I++NL P+ + + + + L P ++ +E TE+ ++ E ++ +K Sbjct: 612 IAVNLSPVQF-RLINLPDTVSSVLAQTGLDPTRLELEVTEAALMKDRLTTLELLRRMKKL 670 Query: 299 GISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQ 358 G+ + +D FG G++ L L F D+IKI + IT++ +AI++AI+ SL++ Sbjct: 671 GVRIVMDDFGTGYSSLSNLQSFPFDKIKIDRSFITSMETDVSARAIVRAIVGLGRSLDLP 730 Query: 359 VSAMGVATPEEWMWLESAGIEMFQGDLFAKAK---LNGIPSIAWPEKK 403 V A G+ T ++ + G E QG LF + + PS P KK Sbjct: 731 VVAEGIETFDQHRMVIEEGCEQVQGFLFGRPANAPASADPSSRLPSKK 778 >UniRef50_A1WHK4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Comamonadaceae RepID=A1WHK4_VEREI Length = 836 Score = 292 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 63/301 (20%), Positives = 119/301 (39%), Gaps = 14/301 (4%) Query: 100 HERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDK 159 H + A+F + L ++ +F+ + + + + Sbjct: 522 HSTPSIGIALFGPQACRVDELLKQADLAMYQAKAAGRNTQRFFDPEMQAAASHRS-ALEA 580 Query: 160 ELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEI 214 +L + H + P+VD R+ EA+V+ N P+ + G I Sbjct: 581 DLRRGLQQRELVLH--YQPMVDGQ-GRLQGAEALVRWNHPQRGLMPPAEFTPLAEQTGLI 637 Query: 215 YTADLKSKALAFTMAHALELGDKM----ISINLLPMTLVNEPDAVSFLLNEIKANALVPE 270 A A +S+N+ + D V LL ++A+ PE Sbjct: 638 LPLGQWVLETACAQLVAWSRSALTRAFSLSVNVSVRQF-RQADFVQQLLATLEASGANPE 696 Query: 271 QIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQE 330 ++ +E TES +++ + ++ L+ G+ A+D FG G++ L L R D+IKI + Sbjct: 697 RLTIELTESLLLNDVQDIIARMQQLRCHGLGFALDDFGTGYSSLSQLKRLPLDQIKIDRS 756 Query: 331 LITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 + ++ AI+++I+ SL + V A GV T + +L+ G + FQG F + Sbjct: 757 FVRDLPADAGDGAIVRSILALAQSLGLAVVAEGVETRAQLEFLQHHGCQTFQGYHFGRPM 816 Query: 391 L 391 Sbjct: 817 P 817 >UniRef50_C5SAJ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SAJ7_CHRVI Length = 1030 Score = 292 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 57/297 (19%), Positives = 110/297 (37%), Gaps = 12/297 (4%) Query: 103 DDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELD 162 + A++ +G + L + L +R F+ S + + +L Sbjct: 709 TSIGAALYPEGGTSADLLIRNADLALYRAKSNGRGHCQLFDPVLA-SEISERLEFENDLR 767 Query: 163 SCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIY-- 215 + + P V+ S RI+ EA+++ SP+ + G I Sbjct: 768 DALDRGEL--ELFYQPQVEVGSGRIVGLEALLRWRHPGKGMVSPTVFVPILEELGLIELV 825 Query: 216 -TADLKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIV 274 L++ + L I++N+ + + + + + Sbjct: 826 GEWVLRTACRQHRVWRERGLSPPRIAVNVSGRQFLRL-GFAETVERILTEEGTAVTAVEL 884 Query: 275 EFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITN 334 E TE+ + D E ++ LK G+ +A+D FG G++ + L RF D +KI + + Sbjct: 885 EITETVLAHDTDVCIETLRRLKRLGLEIALDDFGTGYSSMSYLKRFPVDTLKIDRAFVAE 944 Query: 335 VHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 + AI AI+ L ++ A GV TP + +L G + +QG F + Sbjct: 945 CDVNAEDAAICTAILSLARGLGLKTLAEGVETPGQLEFLRREGCQFYQGFFFRRPMP 1001 >UniRef50_B7KGZ9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KGZ9_CYAP7 Length = 897 Score = 292 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 64/281 (22%), Positives = 115/281 (40%), Gaps = 18/281 (6%) Query: 121 YDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFA--FHP 178 D + + F DS + I +L++ D + P Sbjct: 606 LRDADTAMYYAKNNGRGKYQVF-----DSSMHIHALKQLQLENDLRRAIERDELVVYYQP 660 Query: 179 IVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLK-----SKALAFTM 228 I+ + +I EA+V+ SP+ + G I D + + F Sbjct: 661 IICLKNGTLIGVEALVRWQHPQEGMISPAEFIPIAEETGLIIELDQWVLNTACQQMRFWQ 720 Query: 229 AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEF 288 + +S+NL ++PD + + N + N L + + +E TE+ +I + Sbjct: 721 EKYSDFKSITLSVNLSGRQF-SQPDLIKNIDNILTQNKLEKQYLKLEITETVLIENPNSA 779 Query: 289 AEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAI 348 AE ++ L ++V +D FG G++ L L RF D +KI + ++N+ + II+ I Sbjct: 780 AEMLEQLIERKVTVCLDDFGTGYSSLGYLHRFPLDVLKIDRSFVSNIETNTSNSTIIRTI 839 Query: 349 IKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 I LEI+V A G+ T ++ +L+S G QG F+ Sbjct: 840 ITLARELEIEVIAEGIETEQQREFLQSLGCHYGQGYWFSPP 880 >UniRef50_B0UAD7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacterium sp. 4-46 RepID=B0UAD7_METS4 Length = 1034 Score = 292 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 58/279 (20%), Positives = 104/279 (37%), Gaps = 14/279 (5%) Query: 120 TYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF--AFH 177 + + + FE L S A+ Sbjct: 740 LLRHADMALYEAKGRGRGLACVFEKSIAARLH-----ERLALQSDLAEAVPGGQLVLAYQ 794 Query: 178 PIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTMAHAL 232 P+ D R+ FEA+V+ N SP+ + G+I A A AL Sbjct: 795 PVFDLAGGRVSGFEALVRWNHPVRGFVSPAQFIPIAEQTGQIEAIGAFVLDRACRDAAAL 854 Query: 233 ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAI 292 +++NL P+ L D V + + + L P ++ +E TE+ ++ + + + Sbjct: 855 P-PGIRVAVNLSPVQL-RAEDIVERIATALAESGLAPARLELEITETALMEDSERMVQLL 912 Query: 293 KSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCC 352 + ++A G+ + +D FG G++ L L F +IKI Q + + AI+ AI+ Sbjct: 913 ERIRALGVRIVLDDFGTGYSSLSYLRTFPFHKIKIDQSFVREMTTRANSLAIVSAIVGLA 972 Query: 353 TSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 L + +A G+ T + ++ G QG K K Sbjct: 973 DELGMATTAEGIETADHLDFVRKVGCREAQGYFLGKPKP 1011 >UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=3 Tax=Neisseriaceae RepID=C1DBY5_LARHH Length = 839 Score = 292 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 75/323 (23%), Positives = 122/323 (37%), Gaps = 13/323 (4%) Query: 90 AGMELFDLR-LHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAED 148 GM D ++ V A++ S ++ + +R +F Sbjct: 515 QGMVTLDGHDVYVTASVGIAIYPDDGSTPEVLRMNADTAMYRAKERGKNNFQFFTADMNA 574 Query: 149 SWLFIADGSDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSA 203 S L + L F P VD I EA+++ SP+ Sbjct: 575 STLARLRL-ESNLHRALARQ--EFQLHFQPKVDLAHGHIYGMEALLRWRSHELGPVSPAD 631 Query: 204 IAVGQRKDGEIYTADLKSKALAFTMA-HALELG--DKMISINLLPMTLVNEPDAVSFLLN 260 + I T A A H L LG +++NL + + D V+ + Sbjct: 632 FIPIAEESNLISTIGEWVLEQACRQARHWLNLGLLPGTVAVNLSSKQMT-QGDIVATVRR 690 Query: 261 EIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRF 320 ++ + L + +E TES + E +K+LKA G+ +AID FG G++ L L + Sbjct: 691 ILEHSNLPGHYLELEITESVAMDNTGEMIRTLKNLKALGVRIAIDDFGTGYSSLSYLKQL 750 Query: 321 QPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEM 380 D +KI + +T++H+ AI AII SL +Q A GV E +L G + Sbjct: 751 PIDVLKIDRSFVTDLHEDRDDAAIASAIISMGQSLNLQPVAEGVEREEHRQFLLDHGCQY 810 Query: 381 FQGDLFAKAKLNGIPSIAWPEKK 403 QG LF++ E + Sbjct: 811 GQGYLFSRPVPAATMEQLLLESQ 833 >UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMB6_9PROT Length = 922 Score = 292 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 65/304 (21%), Positives = 118/304 (38%), Gaps = 17/304 (5%) Query: 97 LRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADG 156 L H + +F ++ L ++ +F+ + A Sbjct: 606 LNYHCTASIGITLFGAHSTNVDELLKQADLAMYQAKDSGRNAIRFFDPEMQ-----AAIT 660 Query: 157 SDKELDSCALSPTINDHF--AFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQR 209 S L++ F + P V S R+ EA+++ + PS Sbjct: 661 SRVALEADLREAVEAGQFQLYYQPQVVGESHRLTGAEALLRWHHSRRGMVPPSEFIPLAE 720 Query: 210 KDGEIYTADLKSKALAFTM----AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKAN 265 + G I A A E+ +++N+ + + D V +L + Sbjct: 721 ETGLILPLGQWVLETACAQLATWASQPEMAQLTVAVNVSAHQI-RQTDFVDQVLAVLADA 779 Query: 266 ALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRI 325 P+++ +E TES ++S ++ + LK+ G+ ++D FG G++ L L R D++ Sbjct: 780 GANPQRLKLELTESLLVSNVEDIIAKMTLLKSRGVGFSLDDFGTGYSSLSYLKRLPLDQL 839 Query: 326 KISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDL 385 KI Q + V AI + I+ SL + V A GV T E+ +L +G +QG L Sbjct: 840 KIDQSFVNEVLTDANDAAIAKMIVALAESLGLAVIAEGVETEEQRNFLAESGCHAYQGYL 899 Query: 386 FAKA 389 F+K Sbjct: 900 FSKP 903 >UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74A79_GEOSL Length = 873 Score = 292 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 61/290 (21%), Positives = 110/290 (37%), Gaps = 12/290 (4%) Query: 108 AVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALS 167 ++F + + +F + + L Sbjct: 564 SLFPDDGDTMEALIKKADTAMYHIKESGRNSFQFFAEEMNQK-VNARLTIETGLRRALEK 622 Query: 168 PTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTAD---L 219 + H + P ++P + ++ EA+V+ N SP+ G I L Sbjct: 623 GEMLLH--YQPRLEPGTGAVVGMEALVRWNSPDMGLISPADFIPIAEDSGLIVEIGDWVL 680 Query: 220 KSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTES 279 + H + +S+N+ V D V ++ I+ + L P + +E TE+ Sbjct: 681 ATACCQALEWHRMGHDSLRVSVNISARQFVGH-DFVDRVVRIIEQSGLSPHFVELELTET 739 Query: 280 EVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSG 339 + DE + + L+ GI+++ID FG G++ L L RF D +KI + I ++ K Sbjct: 740 ALTHNVDETVKIMNRLRERGITISIDDFGTGYSSLNYLKRFPVDVLKIDKSFIDDMVKRR 799 Query: 340 PRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 AI+ II + ++V A GV T E+ L E QG F++ Sbjct: 800 EDAAIVATIIGIAHHMHMKVVAEGVETAEQMKLLMEGNCEEIQGFYFSRP 849 >UniRef50_B5E7Y8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Geobacter RepID=B5E7Y8_GEOBB Length = 704 Score = 292 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 61/303 (20%), Positives = 120/303 (39%), Gaps = 20/303 (6%) Query: 108 AVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALS 167 +++ + + ++ ++ L L+S Sbjct: 405 SLYPFDATTASDLIRNADGAMYQAKEQGRNGYQIYDESMNAKALERII-----LESQLHK 459 Query: 168 PTINDHF--AFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLK 220 + F + P V S R++ EA+V+ N P + G + D Sbjct: 460 ALKEEEFIVYYQPQVSNQSGRVVGIEALVRWNSKELGLVEPGRFLPLAEEIGLVIQIDQW 519 Query: 221 ---SKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFT 277 + ++IN+ + + + + + + +K + L P + +E T Sbjct: 520 VMREACRQHKLWLDAGFPPVTLAINISGQQFM-KNELLETVTSVLKESGLDPGLLELELT 578 Query: 278 ESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHK 337 E +++ + + +++LK G+ +AID FG GF+ L L RF D +KI + I ++ Sbjct: 579 EGVLMAHTERTVKTLQALKGMGVRLAIDDFGTGFSSLSYLKRFPLDVLKIDRTFINDITT 638 Query: 338 SGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSI 397 AI A I+ +++++V A GV T + +L G +M+QG LF+K +PS Sbjct: 639 DPDDAAITLATIEMAHTMKLKVIAEGVETKPQLDFLTKNGCDMYQGYLFSKP----VPST 694 Query: 398 AWP 400 P Sbjct: 695 ELP 697 >UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALY4_PELPD Length = 1238 Score = 292 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 62/310 (20%), Positives = 121/310 (39%), Gaps = 13/310 (4%) Query: 98 RLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGS 157 LH + ++F + + +R + +F +S Sbjct: 923 ELHCSCSIGISIFPEDGLDKDTLLRNADTAMYRAKEVGRNNY-HFYTEELNSRAMQRLSI 981 Query: 158 DKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDG 212 + L + H + P +D + + EA+++ SP + G Sbjct: 982 ETSLRKGIERNELLLH--YQPKLDLHTGKPYGLEALLRWQHPDHGMISPMEFIPIAEETG 1039 Query: 213 EIYTAD---LKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVP 269 I +++ + ++ + +S+N+ + + V L+ ++ + P Sbjct: 1040 LIIPIGKQVIRNACRQLSRWSSVGMSHICLSLNVSAVQF-RDRRFVEDLVQLVREEGVSP 1098 Query: 270 EQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQ 329 +I +E TE+ ++ +++LK G +ID FG G++ L L RF D +KI + Sbjct: 1099 HRIELELTETMLMEDAVRTIRVMETLKDEGFLFSIDDFGTGYSSLNYLHRFPIDCLKIDR 1158 Query: 330 ELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 I + + AII+AII +L++QV A GV +E+ L +AG + QG A+ Sbjct: 1159 SFIRGMLERPADLAIIKAIIGLGHTLDMQVIAEGVEKEDEYRALRAAGCDGIQGYFVARP 1218 Query: 390 KLNGIPSIAW 399 L W Sbjct: 1219 -LTPEQVPEW 1227 >UniRef50_B4VY11 PAS fold family n=2 Tax=Oscillatoriales RepID=B4VY11_9CYAN Length = 1393 Score = 292 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 62/287 (21%), Positives = 109/287 (37%), Gaps = 14/287 (4%) Query: 113 GTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTIND 172 G + + D R + T F+ L + EL + Sbjct: 1095 GYHRAEDLLRDADTAMHRAKLQGTACYVMFDTAMSGRALAQLRL-ETELRWAIERQELEV 1153 Query: 173 HFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLK-----SK 222 + + PI+ + +I FEA+V+ SP A + G I Sbjct: 1154 Y--YQPIISLGTGKITGFEALVRWQHPEQGMISPGAFIPLAEETGLIIPIGQWVLRTSCY 1211 Query: 223 ALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVI 282 L +S+NL ++ + + + I+ + P + +E TES ++ Sbjct: 1212 QLRQWQQQFPHYPPLTMSVNLSGKQF-SQTNLIEQIAQIIQETEVNPSTLKLEITESGIM 1270 Query: 283 SRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQ 342 D + ++ LKA I + ID FG G++ L L +F D +KI + ++ + +G Sbjct: 1271 EHSDSASALLERLKALNIQLYIDDFGTGYSSLSRLHQFPIDALKIDRSFVSRMGDAGENG 1330 Query: 343 AIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 I+QAI+ +L + V A G+ T + L E QG F+K Sbjct: 1331 EIVQAIVTLAHNLGMDVVAEGIETNMQLAQLRGRRCEYGQGYFFSKP 1377 >UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZD9_9PROT Length = 1149 Score = 292 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 56/296 (18%), Positives = 113/296 (38%), Gaps = 15/296 (5%) Query: 117 FQLTYDDRALQFFRTFVLATEQSTYFEIPAE-DSWLFIADGSDKELDSCALSPTINDHFA 175 F+ + +R +F + S + G+ L + H Sbjct: 858 FETLSKNADTAMYRVKHDGRNGFCFFTSEMQAHSARTLQLGN--ALRHALTRGQL--HLH 913 Query: 176 FHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTMAH 230 + P + ++ EA+++ SP+ +G+I A Sbjct: 914 YQPQISTQDGHVVGAEALLRWQHPELGSISPAEFIPIAEDNGQIIPIGEWVLRTAIKQLK 973 Query: 231 AL---ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDE 287 L ++++NL + + + + + + + + + +E TE+ + Sbjct: 974 DWMDSGLPPMIMAVNLSAAQF-RQSNLMELVTSILDESKVPHRYLELELTEAVAMDDPQL 1032 Query: 288 FAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQA 347 + L GI ++ID FG G++ L L RF+ ++KI Q + ++ +AI+ A Sbjct: 1033 AIGVMDKLHTGGIKMSIDDFGTGYSSLSYLKRFKVYKLKIDQSFVHDITDDPDDKAIVAA 1092 Query: 348 IIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEKK 403 II +SL +Q A GV T + +L G QG F+K L +++ +K+ Sbjct: 1093 IINMASSLGMQTIAEGVETAGQLSFLRLQGCNEVQGYYFSKP-LPAEQFVSYLQKQ 1147 >UniRef50_C4WM42 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WM42_9RHIZ Length = 803 Score = 292 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 59/279 (21%), Positives = 109/279 (39%), Gaps = 14/279 (5%) Query: 124 RALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF--AFHPIVD 181 + +R ++ + ++L++ + A+ P+ Sbjct: 514 ADIALYRAKTEGRGLFAFYSPEMDQ-----EIRERRQLEADLRHAMVRGQIGIAYQPLFA 568 Query: 182 PLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTMAHALELGD 236 R +EA+V+ N P + G I A A E Sbjct: 569 TSDGRCTGYEALVRWNHPERGQIPPDVFIPIAEETGTIVALGEWVLREACRTAAEWE-SH 627 Query: 237 KMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLK 296 I++NL P+ + + I L P ++ +E TES ++ E ++ +K Sbjct: 628 LSIAVNLSPVQF-RLVSLPDTVRSVIAETGLDPTRLELEVTESALMKDRLTTLELLRRMK 686 Query: 297 AAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLE 356 +G+ + +D FG G++ L L F D+IKI + IT++ +AI++AI+ SL+ Sbjct: 687 KSGVRIVMDDFGTGYSSLSNLQSFPFDKIKIDRSFITSMETDVSARAIVRAIVGLGRSLD 746 Query: 357 IQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIP 395 + V A G+ T ++ + G E QG LF + P Sbjct: 747 LPVVAEGIETFDQHRMVIEEGCEQVQGFLFGRPANAPAP 785 >UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WEV3_VEREI Length = 981 Score = 292 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 58/295 (19%), Positives = 116/295 (39%), Gaps = 22/295 (7%) Query: 116 KFQLTYDDRALQFFRTFVLATEQSTYF--EIPAED-SWLFIADGSDKELDSCALSPTIND 172 F Y + + +F ++ A L I + + L+ Sbjct: 690 SFDTLYQRADAAMYSAKQSGRNRYGFFTADLQARTARALQIENALRRALER------QQF 743 Query: 173 HFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFT 227 + P V + +++ EA+++ + P+ G+I A Sbjct: 744 ELHYQPQVSLGTGQVVGAEALLRWHHPELGVVAPAEFIPVAENSGQIVALGEWVLHTAAR 803 Query: 228 MAHAL---ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISR 284 A +L + +S+NL + P + ++ L ++ +E TE + Sbjct: 804 DAKRWLDMQLPLRAVSVNLSAVQF-RHPQLPEMVTRCLQQAGLPARRLELELTEGAAVDD 862 Query: 285 FDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAI 344 + L G+ +++D FG G++ L L RFQ ++KI Q + ++ +AI Sbjct: 863 PVAALAMMDQLHDRGVRLSMDDFGTGYSSLSCLKRFQIYKLKIDQSFVRDLDDDANDRAI 922 Query: 345 IQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAW 399 + AII+ +L +Q +A GV T + +L + G + QG LF++ +P+ A+ Sbjct: 923 VSAIIRMAQALGMQTTAEGVETDGQLQFLRAQGCDEGQGYLFSRP----LPADAF 973 >UniRef50_A1ASK8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=A1ASK8_PELPD Length = 858 Score = 292 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 54/292 (18%), Positives = 106/292 (36%), Gaps = 16/292 (5%) Query: 108 AVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALS 167 +++ K + + + +R +++ + E++S Sbjct: 401 SLYPKDSGDGSTLIRNADIAMYRAKQEGGGVFSFYAPEMNQRAMETM-----EIESALRL 455 Query: 168 PTINDHF--AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTAD-- 218 F + P VD S RI EA+++ +P+ + G I Sbjct: 456 ALERGEFTLYYQPKVDLASGRISGCEALIRWLHPRRGVVAPADFIPLAEETGLIVPIGTW 515 Query: 219 -LKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFT 277 LK A + +++NL D + + L P + +E T Sbjct: 516 VLKEACRQVRAWQAEGVPIANVAVNLSARQF-RTGDLPGLVREVLGETGLDPHLLELEMT 574 Query: 278 ESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHK 337 ES V++ + ++ L A G+ +++D FG G++ LS F + +KI + I + Sbjct: 575 ESMVMADHAQVVAVMEELTAIGVRLSLDDFGTGYSSFAHLSHFPINHLKIDRSFIKQIVT 634 Query: 338 SGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 I +II + ++ A GV T + +L G + QG L ++ Sbjct: 635 DPNSATIATSIIAMAHRMRLKAIAEGVETEAQLAYLRKQGCDEIQGYLLSRP 686 >UniRef50_A1K5F7 EAL/GGDEF-domain containing signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5F7_AZOSB Length = 576 Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats. Identities = 65/294 (22%), Positives = 113/294 (38%), Gaps = 14/294 (4%) Query: 106 LQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCA 165 + V G F+L + R ++ ++ + EL Sbjct: 278 IAMVGGDGADVFELLM-NAEAAVARVKCQGGNGVRCYDRAM-NAASAERLTLEAELRHAV 335 Query: 166 LSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLK 220 + + PIVDP + A EA+V+ P + G I Sbjct: 336 ERGEL--RLFYQPIVDP-DGTVRAAEALVRWQHPEQGLLAPDRFIPLADETGLITEIGAW 392 Query: 221 SKALAF---TMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFT 277 A H +S+N+ + +P + + ++ + P + +E T Sbjct: 393 VLTEACYQGRCWHDAGHERFRVSVNVSAVQF-GQPRLLETVREALRGSGFPPACLTLEIT 451 Query: 278 ESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHK 337 ES ++S + A ++SLK G+ +A+D FG G++ L L R D +KI + + +V Sbjct: 452 ESSLMSDVESAAGMLRSLKNMGVRIAVDDFGTGYSSLSYLRRLPIDTVKIDKSFVRDVSN 511 Query: 338 SGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 +G AI++AII SL + A GV T E+ L G + FQG + + Sbjct: 512 NGEDAAIVRAIIALAHSLGLGTVAEGVETAEQEATLRREGCDSFQGYRYGRPVP 565 >UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Psychromonas ingrahamii 37 RepID=A1SZA9_PSYIN Length = 777 Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats. Identities = 64/303 (21%), Positives = 122/303 (40%), Gaps = 14/303 (4%) Query: 98 RLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGS 157 R H + +F + + + +++ +F ++S + AD Sbjct: 469 RYHSTTSIGVTIFSGNETGIEELLKQADIAMYQSKAAGRNTWHFFNKTMQESIIARAD-M 527 Query: 158 DKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDG 212 +++L + V S + + EA+++ SP + G Sbjct: 528 ERDLRKAI--EDNQFQLHYQAQVS-SSGQTLGAEALIRWQHPERGQVSPFNFIPLAEETG 584 Query: 213 EIYTADLKSKALAFTMAHALELG----DKMISINLLPMTLVNEPDAVSFLLNEIKANALV 268 I A A + D ++++N+ L ++ D V + +K + + Sbjct: 585 LILPIGQWVLDSACAQLKAWQKNPLTQDLVLAVNISAKQL-HQEDFVEQVKATLKRHDIN 643 Query: 269 PEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKIS 328 P ++ +E TES ++ + + L GIS ++D FG G++ L L + ++IKI Sbjct: 644 PARLKLELTESMLVENISDIITKMNILSKIGISFSLDDFGTGYSSLQYLKKLPLNQIKID 703 Query: 329 QELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 Q + ++ +AI++ II SL+I V A GV T EE +L G +QG LF+K Sbjct: 704 QSFVRDLITDASDRAIVRTIITMSHSLDISVIAEGVETVEERQYLLDNGCTHYQGYLFSK 763 Query: 389 AKL 391 Sbjct: 764 PVP 766 >UniRef50_B7KEN2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Cyanobacteria RepID=B7KEN2_CYAP7 Length = 1471 Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats. Identities = 63/297 (21%), Positives = 117/297 (39%), Gaps = 15/297 (5%) Query: 116 KFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFA 175 + + +R + T F+ + + + L + H Sbjct: 1179 SASELLRNADIAMYRAKEKGRARYTIFDSKMHIQATRLLEL-ETNLRLALEREELIVH-- 1235 Query: 176 FHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLK-----SKALA 225 + PIV + +++ FEA+V+ SP + G I + + Sbjct: 1236 YQPIVSLTTGKLLGFEALVRWEHPKKGLISPGEFIPIAEETGLIIPLGEWVLLESCRQMK 1295 Query: 226 FTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 L +S+NL L P ++ L + +K L + + +E TES +++ Sbjct: 1296 AWQKEFSGLDKIRVSVNLSGKQL-EYPHLINCLESILKQTGLEGKNLKLEITESMLMNNK 1354 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 + ++ + +K I ++ID FG G++ L L D +KI + + + + G I+ Sbjct: 1355 EVVSDLLLQIKGKNIQISIDDFGTGYSSLSYLHYLPVDTLKIDRSFVNRMTQLGENFEIV 1414 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEK 402 +AII L++ V A GV T + L+ G E QG F+K L+ +W EK Sbjct: 1415 EAIINLAHHLQMDVVAEGVETEQHIKQLKQLGCESGQGYFFSKP-LDSQKVTSWFEK 1470 >UniRef50_Q88HN4 Sensory box protein/GGDEF domain protein n=1 Tax=Pseudomonas putida KT2440 RepID=Q88HN4_PSEPK Length = 733 Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats. Identities = 66/331 (19%), Positives = 121/331 (36%), Gaps = 18/331 (5%) Query: 74 IVELLCD----YAPARRFGKAGME--LFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQ 127 + +LL D R G + + LH + V D + + Sbjct: 396 LTDLLRDEDAVPVAERLLASIGKPYCIQGIDLHVSTSIGITVSDGHIEQPMKLIQQADMA 455 Query: 128 FFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPIVDPLSRRI 187 ++ ++ +L + + + H + P ++ +RR+ Sbjct: 456 MYKAKQQGRNNFQWYTSDLNHRVCE-HRSLRNDLQKAIKTQSFSLH--YQPQIEARTRRV 512 Query: 188 IAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTMAHAL---ELGDKMI 239 + EA+++ SP+ G+I L A L + Sbjct: 513 VGIEALLRWEHPVRGFISPAVFIPVAEDSGQIIPLSLWVLDTACAQLRDLCDQGFNGISM 572 Query: 240 SINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAG 299 ++N+ PM V + + + L Q+ +E TES ++ ++ + LK G Sbjct: 573 AVNISPMHFQC-GQFVECIQAVLSKHGLSAGQLELEITESLLLHNVEQAIATLHRLKDLG 631 Query: 300 ISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQV 359 + +A+D FG GF+ L L D+IKI + I ++ + AI Q II L + V Sbjct: 632 VRIALDDFGTGFSSLSYLKCLPIDKIKIDRSFIQDISTNPHDAAITQGIISMAHHLSLSV 691 Query: 360 SAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 A GV T + +LE ++ QG FA+ Sbjct: 692 VAEGVETAPQVNFLERGRCDILQGYYFARPM 722 >UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4AX01_9CHRO Length = 1409 Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats. Identities = 65/297 (21%), Positives = 126/297 (42%), Gaps = 19/297 (6%) Query: 118 QLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF--A 175 + + +R+ + T F+ + EL++ + F Sbjct: 1119 SELVRNADIAMYRSKEAGRARYTMFDPIMHTQATQLL-----ELETNLRLALEREEFIVY 1173 Query: 176 FHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLK-----SKALA 225 + PIV ++R ++ FEA+V+ SP+ + G I + + Sbjct: 1174 YQPIVSLMNRNLLGFEALVRWIHPEKGVISPANFIPVAEETGLIIPLGEWVLRESCRQMK 1233 Query: 226 FTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 + + +S+NL L +P+ ++ + N + L + + +E TES +++ Sbjct: 1234 AWQEQFIGAENLRVSVNLSGKQL-QQPNLINRIDNILTETGLEGKNLKLEITESMLMNNK 1292 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 ++ +E + +KA I V+ID FG G++ L L D +KI + ++ + + G I+ Sbjct: 1293 EQVSELLLQMKAKKIQVSIDDFGTGYSSLSYLHYLPVDTLKIDRSFVSRMSQVGENFEIV 1352 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEK 402 +AII L++ V A GV T + L+ G E QG F+K L ++W E+ Sbjct: 1353 EAIITLAHHLQMDVVAEGVETEQHLRQLQQLGCEFGQGYFFSKP-LESEKIVSWLER 1408 >UniRef50_C1DD31 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DD31_LARHH Length = 910 Score = 291 bits (745), Expect = 3e-77, Method: Composition-based stats. Identities = 62/295 (21%), Positives = 112/295 (37%), Gaps = 13/295 (4%) Query: 115 SKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF 174 + F + +R +F ++ L + L + Sbjct: 605 TDFATLSKCAEIAMYRAKQEGRNTLRFFFPEMQERTLRHVQLT-GALRGAVERGEM--QL 661 Query: 175 AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTA-DLKSKALAFTM 228 + P VD + + EA+++ SP + G I D + A + Sbjct: 662 HYQPQVDLQTGELSGVEALLRWTHPLFGAVSPGEFIPLAEESGLIIPIGDWVLRTAARQL 721 Query: 229 AHAL--ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFD 286 A L L ++++NL + N P + + + + P VE TES ++ + Sbjct: 722 ADWLRDGLPPMVMAVNLSVLQF-NLPGLAQQIASILSEAGVPPALFEVELTESMAMTEPE 780 Query: 287 EFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQ 346 I L + G+ V++D FG G++ L L RF+ DR+KI + + +AI+ Sbjct: 781 AAIATIDELHSVGVQVSLDDFGTGYSSLAYLKRFRLDRLKIDGSFVRDADSDPEDRAIVD 840 Query: 347 AIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPE 401 AI+ SL + A GV T + + + G + QG ++ L +AW E Sbjct: 841 AIVGMAESLGLATVAEGVETSGQLEVIRALGGDAVQGYWISRP-LPAAGLVAWLE 894 >UniRef50_C0ZBT6 Probable signaling protein YkoW n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT6_BREBN Length = 816 Score = 291 bits (745), Expect = 3e-77, Method: Composition-based stats. Identities = 60/309 (19%), Positives = 116/309 (37%), Gaps = 13/309 (4%) Query: 89 KAGMELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAED 148 K L D + + A+F + + + F D Sbjct: 491 KQPFTLKDSEFYISASIGTAIFPDHGTDAVALLKKADTAMYEVK-KQGKNGHLFYTTDFD 549 Query: 149 SWLFIADGSDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSA 203 + L +++L + + + P S R+I EA+V+ N SP Sbjct: 550 AQLLENIEIERDLRKAIERKELVVY--YQPQFHSESNRMIGVEALVRWNHPTKGMLSPGV 607 Query: 204 IAVGQRKDGEIYTAD---LKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLN 260 + G IY L+ H +S+NL ++ + V ++ N Sbjct: 608 FIPIAEETGLIYEIGTWVLREACRQMKQWHDKGGPLIPVSVNLSSHQF-HQRNLVQYIKN 666 Query: 261 EIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRF 320 ++ L P + +E TES ++ + L G +++D FG G++ L L +F Sbjct: 667 ILEETKLAPHFLELEITESMMM-DPAVSISILHELNKIGTRISLDDFGTGYSSLSYLKKF 725 Query: 321 QPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEM 380 ++KI + IT++ ++ +AI+ II L++ V A G+ T ++ L + Sbjct: 726 PIHKLKIDRSFITDLSRNENDKAIVATIISMAKHLKLDVIAEGIETKDQLDILTENHCKE 785 Query: 381 FQGDLFAKA 389 QG +++ Sbjct: 786 IQGYYYSRP 794 >UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RS22_9PROT Length = 1006 Score = 291 bits (745), Expect = 4e-77, Method: Composition-based stats. Identities = 60/300 (20%), Positives = 114/300 (38%), Gaps = 14/300 (4%) Query: 99 LHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSD 158 H V +F L + +F+ + + + Sbjct: 700 YHNTPSVGITLFGGQQVGIDELMKRADLAMYEAKASGRNALRFFDPRM-QAVVTARADIE 758 Query: 159 KELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGE 213 K+L + + A+ P VD S ++I EA+++ SP+ + G Sbjct: 759 KDLRAAVGRQ--SFFLAYQPQVD-ASGQVIGAEALLRWQHQQRGTVSPAEFIPVAEETGL 815 Query: 214 IYTADLKSKALAFTMAHALELGDKM----ISINLLPMTLVNEPDAVSFLLNEIKANALVP 269 I L A A +S+N+ + + V +L + + P Sbjct: 816 ILPLGLWVLETACAQAALWAARPGRERFTVSVNVSARQF-RQANFVDQVLAVLARSGAHP 874 Query: 270 EQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQ 329 + +E TES ++ + + +LKA G+ ++D FG G++ L L + D++KI Q Sbjct: 875 RNLKLELTESMLLDNVQDIIAKMSALKARGVGFSLDDFGTGYSSLSYLKQLPLDQLKIDQ 934 Query: 330 ELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 + ++ + I + II +L + V A GV + E+ L + G +QG LF++ Sbjct: 935 SFVRDLLTDPNDEVIARTIIALARTLGLSVIAEGVESVEQQDALAAQGCLAYQGYLFSRP 994 >UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4Q9_AZOSE Length = 813 Score = 291 bits (745), Expect = 4e-77, Method: Composition-based stats. Identities = 60/300 (20%), Positives = 108/300 (36%), Gaps = 12/300 (4%) Query: 98 RLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGS 157 LH + ++F ++ + + + ++ + D Sbjct: 501 ELHTTASIGISLFPDDSADPAALMRNADTAMYHAKAAGRAKFQFYTDEMNRAATARLDL- 559 Query: 158 DKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDG 212 +++L + P D + EA+V+ P + G Sbjct: 560 ERKLRGAVARG--EFELWYQPQFDSRHGHLTGLEALVRWRHPQDGLIAPLRFIPLAEETG 617 Query: 213 EIYTAD---LKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVP 269 I L+ L + IS+NL L E V + + A+ L P Sbjct: 618 VIVEIGTWVLREACRQARQWLDAGLPELRISVNLSVRQL-REKCLVDTVWTTLAASGLRP 676 Query: 270 EQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQ 329 + +E TES V+ DE +++LK G+ +AID FG G + L L F D +KI + Sbjct: 677 GLLELEITESAVMDNPDEAVALLQALKNLGVRIAIDDFGTGHSSLSYLKLFPLDHLKIDR 736 Query: 330 ELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 I+++ I+ A + +L + V A GV + + L G + QG F++ Sbjct: 737 SFISDIEHDANDTMIVAAAVSLAHNLGLSVIAEGVESAVQVARLRELGCDELQGFHFSRP 796 >UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YLL7_9CYAN Length = 872 Score = 291 bits (745), Expect = 4e-77, Method: Composition-based stats. Identities = 54/290 (18%), Positives = 111/290 (38%), Gaps = 16/290 (5%) Query: 112 KGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTIN 171 Q +R F L L++ I Sbjct: 566 YDAEDAQTLLKHADAAMYRAKKQGRNNFQVFAEEMHREALNQLT-----LEADLRRALIK 620 Query: 172 DHF--AFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLK---S 221 + F + P V+ + +I+ EA+++ + P + G I + Sbjct: 621 EEFLLYYQPQVEISTGKIVGLEALIRWQHPTLGFVPPDQFIPLAEEIGLIAPIGQWVLQT 680 Query: 222 KALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEV 281 + A L I++NL ++ ++ +L ++ + P+ + +E TES Sbjct: 681 ACIQHQSWQAEGLPPVRIAVNLSARQF-HQSQLINIILQTLETTEIDPQYLELEITESAA 739 Query: 282 ISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPR 341 + + + ++ L+ G+ + ID FG G++ L +L F + +KI + + ++ ++ Sbjct: 740 MQDVEFTIQTLQELREMGLHITIDDFGTGYSSLNVLKHFPLNTLKIDRSFVQDIVENSRD 799 Query: 342 QAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 AI Q I+ L+++V A GV TP++ +L S ++ QG F Sbjct: 800 AAIAQTIVALSQGLKLKVVAEGVETPQQLSFLRSIHCDLAQGYYFCPPVP 849 >UniRef50_B8H1B9 PAS family GGDEF/EAL protein n=3 Tax=Caulobacter RepID=B8H1B9_CAUCN Length = 842 Score = 291 bits (745), Expect = 4e-77, Method: Composition-based stats. Identities = 63/279 (22%), Positives = 109/279 (39%), Gaps = 14/279 (5%) Query: 120 TYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFA--FH 177 + L +R +FE D W + L+ D F Sbjct: 536 LLKNADLALYRAKGDGRGAYRFFETAM-DVW----AQERRALEMDLREALARDELKLFFQ 590 Query: 178 PIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTMAHAL 232 P++ FEA+++ + PS + G I A A Sbjct: 591 PLIGRRDNETTGFEALLRWQHPTRGLVPPSDFIECAEQWGLIGRIGEWVLNEACRTAATW 650 Query: 233 ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAI 292 +++NL P + D V + +KA+ L P ++ +E TE ++ + E + Sbjct: 651 P-SHLTVAVNLSPNQFAS-GDLVDQVRAALKASGLAPARLELEITEGLLLHDSAKTLEQL 708 Query: 293 KSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCC 352 +LKA G+ +A+D FG G++ L L RF D+IKI + + + + I++ I Sbjct: 709 AALKALGVKIAMDDFGTGYSSLAYLWRFPFDKIKIDRSFVAEMQDNVAIADILRTIALLG 768 Query: 353 TSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 +L ++V+A GV T + L + FQG LF + Sbjct: 769 QTLNLEVTAEGVETQAQARLLAEMRCDQFQGFLFGRPMP 807 >UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=cellular organisms RepID=Q31GH8_THICR Length = 1466 Score = 291 bits (745), Expect = 4e-77, Method: Composition-based stats. Identities = 61/292 (20%), Positives = 112/292 (38%), Gaps = 13/292 (4%) Query: 120 TYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPI 179 + ++ +F + + I + L + P Sbjct: 1177 LLKNADTAMYQAKNDGRNVYRFFTMEMQAHSSRIMQ-IESALRVALFDQ--QFELYYQPQ 1233 Query: 180 VDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTM---AHA 231 S II EA+++ N SP + G+I A Sbjct: 1234 TCAKSGSIIGVEALIRWNHPEMGPVSPQEFIPVAEQSGQILAIGWWVLRTAIRQIKIWSE 1293 Query: 232 LELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEA 291 +++NL + E D ++ ++ + PE + +E TES ++ + E Sbjct: 1294 HGKPCIKVAVNLSAVQFRYE-DLPKQVMKILEEEGVSPEFLELELTESVAMANPEAVIEM 1352 Query: 292 IKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKC 351 + L GI ++ID FG G++ L L RF+ ++KI Q I ++ ++II+AII Sbjct: 1353 MDKLVGHGIKMSIDDFGTGYSSLSYLKRFKVSKLKIDQSFIRDLAVDSDDRSIIEAIISL 1412 Query: 352 CTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEKK 403 +L ++ A GV T + +L+ + QG ++KA L A+ EK+ Sbjct: 1413 SKALGLKTIAEGVETQAQLDFLQEKQCDEIQGFYYSKA-LTPEAFDAFYEKQ 1463 >UniRef50_C6AS31 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Rhizobium RepID=C6AS31_RHILS Length = 781 Score = 291 bits (745), Expect = 4e-77, Method: Composition-based stats. Identities = 81/416 (19%), Positives = 152/416 (36%), Gaps = 46/416 (11%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHY 72 +++ ++ A R N + V I L N F + +G +E +K I + R Sbjct: 370 ERLASILDQARRNNRKVTVAYIDLDN---FKDINDGRGHAAGDEVLKEIATRMANSVRAS 426 Query: 73 NIV--------------ELLCDYAPARRFG------KAGMELFDLRLHERDDVLQAVFDK 112 ++V + D RR + D + + A F Sbjct: 427 DMVVRLGGDEFLVVLVHQSSHDAGITRRLRELQKAINRPIRGADGEITITSSIGVAAFPF 486 Query: 113 GTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTIND 172 + + + +R L + E + + + + + D Sbjct: 487 DGATSEELLANADRAMYRAKELGRNTLQHHEGGSTPVGMPLGEHEE------LHQAITGD 540 Query: 173 HF--AFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLK---SK 222 + P VD + RI EA+V+ N + P + G I L Sbjct: 541 QLFLQYQPQVDVATGRITGLEALVRWNHPAKGRVPPVNFIPLAEETGLIVPLGLWVLNEA 600 Query: 223 ALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVI 282 + L I++N+ + PD + + ++ + L + +E TES V+ Sbjct: 601 CRQARQWQDMGLAPLTIAVNVSAKQFAD-PDFATHVAEALERHRLQSRWLELEVTESVVM 659 Query: 283 SRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQ 342 + +++L+ G+ ++ID FG+G++ L L F DR+K+ + L+ + Sbjct: 660 QNAERALAMMETLRGLGVRLSIDDFGSGYSSLAALKTFPFDRLKMDRSLVEALPGDKTAV 719 Query: 343 AIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA-KLNGIPSI 397 AI A+I +L++ V A GV T + +L A E QG F+K IP++ Sbjct: 720 AIASAVISLAQTLKLSVLAEGVETDAQMDFLRQAHCEEAQGFRFSKPVSPEEIPAL 775 >UniRef50_A0LH12 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LH12_SYNFM Length = 702 Score = 291 bits (745), Expect = 4e-77, Method: Composition-based stats. Identities = 55/292 (18%), Positives = 112/292 (38%), Gaps = 13/292 (4%) Query: 120 TYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPI 179 + ++ + + L + + +L + + P Sbjct: 412 LLKNADSAMHHAKAEGRNNFQFYTSSGKTAALR-SLTLEGDLRMALARREL--FVEYQPE 468 Query: 180 VDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTAD---LKSKALAFTMAHA 231 +D + + E +V+ + + P + G I L + + H Sbjct: 469 IDLKTGETVGLETLVRWDHPTLGLIPPLDFIPLAEETGLILPIGEWILSIACMQNAIWHK 528 Query: 232 LELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEA 291 L +++NL + + + + + + L P+ + +E TES ++ Sbjct: 529 SGLEPIRVAVNLSGHQF-RQRNLIKTIAKTLTNSRLDPQHLELEITESTLMENAASTIHT 587 Query: 292 IKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKC 351 +K LK+ G+ +A+D FG G++ L L RF D +KI + I +V + AI +AII Sbjct: 588 VKELKSMGVRLAVDDFGTGYSSLSYLRRFPLDVLKIDRSFIRDVTINADDAAITRAIIAM 647 Query: 352 CTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEKK 403 +L ++V A GV ++ +L+ +M QG + + L EK+ Sbjct: 648 AHNLNLEVIAEGVENEQQLQFLQENNCDMAQGYYYCRP-LTPAKLTKHLEKQ 698 >UniRef50_Q39SC6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39SC6_GEOMG Length = 821 Score = 290 bits (744), Expect = 4e-77, Method: Composition-based stats. Identities = 67/303 (22%), Positives = 115/303 (37%), Gaps = 17/303 (5%) Query: 99 LHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSD 158 LH + +F ++ + + +F + + Sbjct: 504 LHIATSIGIVLFPSDGGNGEMLLQRADMAMYAAKDRGGNSYRFF-----SAEMNTRAVER 558 Query: 159 KELDSCALSPTINDHF--AFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKD 211 EL+ N F + P V+ + +++ EA+V+ N PS + Sbjct: 559 HELEEDMRQALTNGEFFLMYQPQVNTGTWKVVGVEALVRWNHPRKGVILPSRFIPVAEET 618 Query: 212 GEIYTADLK---SKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALV 268 G I L + +NL +E + V + + ++ L Sbjct: 619 GFISKLGRWVLEEACRQGAQWQHDGLPPLQMGVNLCARQFTHE-EIVGTVSDVLQKTGLP 677 Query: 269 PEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKIS 328 E + +E TE+ ++ + + LKA G+ +AID FG G++ L F DRIKI Sbjct: 678 SELLEIELTETMLM-DSETAVSTLGQLKALGVRLAIDDFGTGYSSFNYLKHFPLDRIKID 736 Query: 329 QELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 Q I ++ +S AII+AI+ SL +V A GV T E+ +L S QG F++ Sbjct: 737 QSFIRDIGQSRGNGAIIEAIVAVARSLGPEVLAEGVETEEQLRYLMSITCADIQGFYFSR 796 Query: 389 AKL 391 L Sbjct: 797 PLL 799 >UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Magnetospirillum RepID=Q2W807_MAGSA Length = 880 Score = 290 bits (744), Expect = 5e-77, Method: Composition-based stats. Identities = 65/307 (21%), Positives = 121/307 (39%), Gaps = 17/307 (5%) Query: 96 DLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIAD 155 D L+ + AV+ + + + + +R L + ++ F Sbjct: 557 DNELYVTTSIGIAVYPEDGTTVEALIKNADTAMYRAKDLGRNSYQLYTAAM-NARSFERL 615 Query: 156 GSDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRK 210 + L + VD R+ EA+V+ + SP Sbjct: 616 TMESSLRHALTRE--EFRLVYQVKVDSEDGRMSGVEALVRWHHPEMGLVSPVDFIPLAEA 673 Query: 211 DG---EIYTADLKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANAL 267 G +I L++ L L I++N+ V E D + ++ L Sbjct: 674 MGVISDIGEWVLRTACRQCKHWMDLGLPPVRIAVNVSAQQFV-ETDVPEVVARALRETGL 732 Query: 268 VPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKI 327 P+ + +E TE+ ++ R DE +KSL+A G+ ++ID FG G++ L L R D +K+ Sbjct: 733 PPQYLELELTETVLMQRVDEVVAVLKSLRAMGVRISIDDFGTGYSSLSYLKRMPIDALKV 792 Query: 328 SQELITNVHKSGPR-----QAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQ 382 + + ++ + I+ II +L+++ A GV TPE+ +L S G + Q Sbjct: 793 DRSFVNDIFDGQSKVTEDGAEIVSTIINLAHNLKLKAIAEGVETPEQAEFLRSKGCDEVQ 852 Query: 383 GDLFAKA 389 G L ++ Sbjct: 853 GYLISRP 859 >UniRef50_D2LZH2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LZH2_BACS4 Length = 1071 Score = 290 bits (744), Expect = 5e-77, Method: Composition-based stats. Identities = 61/304 (20%), Positives = 118/304 (38%), Gaps = 12/304 (3%) Query: 104 DVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDS 163 + ++F + L Y ++ Q +F + + + EL Sbjct: 273 SIGVSIFPEDGKTKDLLYKHAEFAMYQAKKSGNGQYHFFSSAEFNGDMNPY-TIEVELRK 331 Query: 164 CALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTAD 218 H + P ++ + +I EA+++ SP++ G I Sbjct: 332 AIEQKQFTLH--YQPRINLSTGELIGVEALIRWEHPKWGLISPASFIPIAEDSGLIVPIG 389 Query: 219 LKSKALAFTMAHALELGDK--MISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEF 276 A ++ ++S+NL P + + S + N + L P + +E Sbjct: 390 NWVLEEACKQNKIWQVSGMSCVVSVNLSPKQFAH-TNLASVIKNTLFNTGLDPHLLEIEI 448 Query: 277 TESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVH 336 TES + ++ +K GI V+ID FG GF+ L L +F + +KI + ++ +H Sbjct: 449 TESMT-ADITRTVATLEEIKKLGIQVSIDDFGTGFSSLYYLKKFPVNTLKIDRSFVSELH 507 Query: 337 KSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPS 396 + + I++ II +L + V A G+ T E+ +L+ QG LF+K + Sbjct: 508 NNPDEETIVKTIISMARNLNLNVVAEGIETKEQLAFLQQHLCHEGQGFLFSKPLPPSVLE 567 Query: 397 IAWP 400 +P Sbjct: 568 EKFP 571 >UniRef50_A8FYM5 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FYM5_SHESH Length = 1055 Score = 290 bits (744), Expect = 5e-77, Method: Composition-based stats. Identities = 67/291 (23%), Positives = 119/291 (40%), Gaps = 18/291 (6%) Query: 111 DKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTI 170 D G S L + +R ++ + EL+ Sbjct: 752 DNGDSVDSLMM-NADSAMYRAKEKGRNCFQFYT-----KEMNQYAQERLELELDLRKALE 805 Query: 171 NDHFA--FHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLK--- 220 D F + P DP + RII EA+++ SP G I Sbjct: 806 RDEFVLHYQPQFDP-NGRIIGCEALIRWQHPDKGLLSPGEFINMAEITGLIVPIGKWVID 864 Query: 221 SKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESE 280 + + M + IS+NL ++ D + + N I + + P + +E TES Sbjct: 865 TACMQHKMWLSQGYPALNISVNLSGRQFLHH-DLLETVKNAITTSGITPSCLELELTESI 923 Query: 281 VISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGP 340 ++ +E + ++ + GI ++ID FG G++ + L RF +++KI Q + + + Sbjct: 924 MMVNVEETIRTLNAISSLGIHMSIDDFGTGYSSMSCLKRFPVNKLKIDQSFVRGLPQDKE 983 Query: 341 RQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 AI+++II +L + V A GV T E+ +L+S+ E FQG F++ L Sbjct: 984 DVAIVKSIIVMAHALNLTVIAEGVETLEQLEFLKSSRCEEFQGYYFSRPIL 1034 >UniRef50_A6CPZ0 Putative uncharacterized protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CPZ0_9BACI Length = 975 Score = 290 bits (744), Expect = 5e-77, Method: Composition-based stats. Identities = 57/292 (19%), Positives = 108/292 (36%), Gaps = 12/292 (4%) Query: 120 TYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPI 179 + +Q ++ + + L + + + PI Sbjct: 681 LLKNADTALNWAKSNGGDQIVFYTNEM-NIMAMEKVKMESYLRKALEREEL--YIVYQPI 737 Query: 180 VDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTAD---LKSKALAFTMAHA 231 V+ +R+I EA+++ N SP + G I + L Sbjct: 738 VELNDKRVIGAEALLRWNHPYLGVVSPMEFIPLAEETGLIGSIGNWVLTEACKQAKEWQE 797 Query: 232 LELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEA 291 D IS+N+ +P + + + +K + L E + +E TES +I + Sbjct: 798 KGFPDFYISVNVSANQF-QQPSFTNEINHALKTSGLSAESLCLELTESVMIQHSGHTIDR 856 Query: 292 IKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKC 351 ++ L A G+ +AID FG G++ L L +KI + + N+ +S P AI+QA+ Sbjct: 857 MEELAALGVKIAIDDFGTGYSSLGYLKHLPLHVLKIDKSFVQNIEESSPDYAIVQAVSMM 916 Query: 352 CTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEKK 403 L +QV G+ T E+ + L ++ QG ++ + Sbjct: 917 GKGLGMQVVVEGIETSEQMVLLSHLNCDLGQGYFISRPVFPDEMEKWMRNSQ 968 >UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STH5_PSYIN Length = 962 Score = 290 bits (744), Expect = 5e-77, Method: Composition-based stats. Identities = 55/296 (18%), Positives = 118/296 (39%), Gaps = 20/296 (6%) Query: 116 KFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF- 174 F+ + +R + + + ++ + +L++ + Sbjct: 655 DFKTLLKNAETAMYRVKNDSRNGFHFVTPEMQ-----LSASRNLQLENALRHALKRNELQ 709 Query: 175 -AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTM 228 + P + + +II EA+++ + SP+ G+I A Sbjct: 710 LYYQPQISTSNGQIIGAEALLRWHHPELGMISPAEFIPIAESSGQIIEIGEWVLRTAIRQ 769 Query: 229 AHAL---ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 +I++NL + + + ++ + + + L E + +E TE+ + Sbjct: 770 TKNWMDDGFTPMIIAVNLSVVQF-RQKNLLTLITDILAEVQLPNEYLELELTEAVTMHDP 828 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 + + + GI ++ID FG G++ L L +F+ ++KI Q I ++ +AI+ Sbjct: 829 ESVINVMNTFHEQGIRMSIDDFGTGYSSLSYLKKFKVYKLKIDQSFIRDISNDPDDRAIV 888 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPE 401 AII ++L +Q A GV T E+ +L G QG F+K +PS+ + + Sbjct: 889 SAIIDMASNLGLQTIAEGVETAEQLAFLRLHGCHEVQGYYFSKP----LPSVEFEQ 940 >UniRef50_Q315P5 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q315P5_DESDG Length = 595 Score = 290 bits (744), Expect = 5e-77, Method: Composition-based stats. Identities = 71/305 (23%), Positives = 117/305 (38%), Gaps = 14/305 (4%) Query: 98 RLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGS 157 RLH V A G + + + + F +S L A Sbjct: 277 RLHLTVSVGVATHRPGQNAPEDMMRNGGIALQHAKRAGGGGLEVFSDWMLESALNHARL- 335 Query: 158 DKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDG 212 E++ H F P+VD S R + EA+ + + SP+ + G Sbjct: 336 --EMELHHALKDNAFHLEFQPLVDLHSGRPVRVEALARWDHPQRGAVSPADFIPVLEETG 393 Query: 213 EIYTADLK-----SKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANAL 267 +I A A EL +S+NL L +P V + + + L Sbjct: 394 QILRLGSWVLENACMAAARWQRRHPELRSVGVSVNLSARQLA-QPALVDQVAAVLSRSGL 452 Query: 268 VPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKI 327 P + +E TE+ ++ + ++ LK G+ +AID FG G++ L L F D +KI Sbjct: 453 EPASLKLEVTETMLMDNPELSNLVLRRLKDLGVFLAIDDFGTGYSSLAYLQSFPIDTLKI 512 Query: 328 SQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFA 387 + + + + I++A+ SL + V A GV E+ + L + G E QG LFA Sbjct: 513 DKSFVMGMTSDPGKFNIVKAVTALAHSLGLDVVAEGVEEQEQRIMLHAVGCEYAQGFLFA 572 Query: 388 KAKLN 392 + Sbjct: 573 RPVPE 577 >UniRef50_Q1ASD1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ASD1_RUBXD Length = 1101 Score = 290 bits (743), Expect = 6e-77, Method: Composition-based stats. Identities = 77/358 (21%), Positives = 132/358 (36%), Gaps = 28/358 (7%) Query: 44 GSHFFQLLEGPEEQVKMIYRAICQDPRHYNIVELLCDYAPARRFGKAGMELFDLRLHERD 103 G F LLEG + + A + E+L + F AG ELF Sbjct: 737 GDEFTVLLEGIADGGEAARVAGR-------VAEVLREP-----FRVAGRELFV-----SA 779 Query: 104 DVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDS 163 V +V G+ + L + ++ F+ + + +L Sbjct: 780 SVGISVSTAGSGSVEELMRGADLAMYEAKREGKDRYRVFDFGMSRTAHDRLRL-ENDLRR 838 Query: 164 CALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTAD 218 + + P+V R++AFEA+++ P + G I Sbjct: 839 AVGRDEL--RLYYQPVVRLGDGRVVAFEALLRWEHPRRGILLPDRFVPLAEETGMIVGIG 896 Query: 219 LKSKALAFTMAHALEL--GDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEF 276 + LA + A +S+N+ LV PD V + ++ L PE +++E Sbjct: 897 RRVLELACSRAAGWRRQEPSLAVSVNISARQLVR-PDFVEEVGRILQRTGLEPEGLVLEV 955 Query: 277 TESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVH 336 TES + E A A++ L+ G+ +A+D FG G++ L L R +KI + + + Sbjct: 956 TESAAMDEPGEAARALQRLRERGVRLALDDFGTGYSSLSYLRRLPVCFLKIDRSFVEGLG 1015 Query: 337 KSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGI 394 ++ +I L + A G+ TP + L G E+ QG FA G Sbjct: 1016 GDSGSGVLVGGVIALSRELGFEPVAEGIETPGQLERLLELGCELGQGYYFASPMPEGA 1073 >UniRef50_Q1H2G8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H2G8_METFK Length = 633 Score = 290 bits (743), Expect = 6e-77, Method: Composition-based stats. Identities = 59/307 (19%), Positives = 110/307 (35%), Gaps = 15/307 (4%) Query: 92 MELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWL 151 + L D + + +++ D + F Sbjct: 308 IVLNDRNFYIGVSIGASIYPYDGEDAAHLLRDADAAMYYAKSRGKNNFQMFSAEMHHKSS 367 Query: 152 FIADGSDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAV 206 + EL + P +++ EA+++ + PS+ Sbjct: 368 TRL-LLETELRVAL--EEKQFELYYQPQFSLPDCKLVGVEALIRWHHPQRGLLCPSSFIP 424 Query: 207 GQRKDGEIYTADLKSKALAFTMAHALELG----DKMISINLLPMTLVNEPDAVSFLLNEI 262 + G I L A+E +S+NL + + V + I Sbjct: 425 VAEETGLIVRIG--EWVLREACRQAMEWKALGVPLRMSVNLSGRQF-RQENLVQTMTKII 481 Query: 263 KANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQP 322 + + + +E TE+ ++ + + LKA G+ +AID FG G++ + L RF Sbjct: 482 ERTGMDSSLLELEITETVLMEDAEATTTRLADLKAMGMHLAIDDFGTGYSSMAYLKRFPV 541 Query: 323 DRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQ 382 R+KI + I ++ AI A I+ SL+++V A GV T + +L G +M Q Sbjct: 542 SRLKIDRSFIRDIPNDPDDVAITTATIQMAHSLKLEVVAEGVETKAQLQFLREQGSDMVQ 601 Query: 383 GDLFAKA 389 G LF++ Sbjct: 602 GYLFSRP 608 >UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q608F9_METCA Length = 965 Score = 290 bits (743), Expect = 6e-77, Method: Composition-based stats. Identities = 65/286 (22%), Positives = 112/286 (39%), Gaps = 16/286 (5%) Query: 116 KFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF- 174 + + L +F + + L++ N F Sbjct: 668 DSESLIKSADAAMYHAKSLGRNTYQFF-----SAEMSAVATERLALENALHQALSNGEFR 722 Query: 175 -AFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLK---SKALA 225 + P ++ SRR+I EA+++ P + G I+ Sbjct: 723 LYYQPQIEVCSRRLIGLEALIRWRHPEVGWVPPLRFIPLAEETGIIHRIGRWVLEEACRQ 782 Query: 226 FTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 A L +++NL P+ L + D + + L P + +E TE+ V+ Sbjct: 783 QREWQAAGLCIVPVAVNLSPLQLQKD-DFPEQVEALLSGCRLAPGLLELELTETAVMRDV 841 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 ++ ++ LK G +ID FG G++ L L+RF D++KI Q I +V + AI Sbjct: 842 GRMSDMLRKLKERGTRFSIDDFGTGYSSLGYLNRFPVDKLKIDQSFIRDVTRREDHAAIT 901 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 +AII L ++V A GV T E+ +LE AG + QG F++ Sbjct: 902 RAIIALAKQLHLKVVAEGVETAEQLEFLERAGCDGAQGFYFSRPVP 947 >UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Proteobacteria RepID=Q0AIX2_NITEC Length = 791 Score = 290 bits (743), Expect = 6e-77, Method: Composition-based stats. Identities = 60/312 (19%), Positives = 119/312 (38%), Gaps = 19/312 (6%) Query: 102 RDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKEL 161 + ++F + S + ++ Y + +++ + Sbjct: 482 NASIGISLFPEDASNATELIQHSDMAMYQAKKEGRNTYRYH------TEALSVAANERLI 535 Query: 162 DSCALSPTINDH---FAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGE 213 L ++ + P+VD + ++ EA+V+ P + G Sbjct: 536 MENRLRYALSAEELILHYQPLVDARTGYVVGVEALVRWQPPGKAMVPPGKFIPIAEETGL 595 Query: 214 IYTADLKSKALAFTMAHAL---ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPE 270 I A A A L ++++NL +E + V + ++ L + Sbjct: 596 IVPLGEWVLRTACKQARAWIDAGLSPLVMAVNLSVRQFQSE-NLVGMVQRILEETQLPAD 654 Query: 271 QIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQE 330 + +E TES + ++ E + LK G+ +AID FG G++ L+ L RF D++KI Q Sbjct: 655 YLELELTESMFMEHVEQSIETLNKLKTLGVHLAIDDFGTGYSSLIYLKRFPIDKLKIDQR 714 Query: 331 LITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 + ++ + I II L++ V A G+ + E+ +L + +QG LF + Sbjct: 715 FVRDLADDHNDREIAATIIAMARGLKLGVLAEGIESEEQLAFLRQQDCDYYQGYLFHRPV 774 Query: 391 LNGIPSIAWPEK 402 I AW + Sbjct: 775 P-AIELEAWLRE 785 >UniRef50_C5SH16 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SH16_9CAUL Length = 763 Score = 290 bits (743), Expect = 7e-77, Method: Composition-based stats. Identities = 59/281 (20%), Positives = 105/281 (37%), Gaps = 17/281 (6%) Query: 124 RALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPIVDPL 183 + ++ F+ ++ D+ A + P Sbjct: 469 ADMALYKAKTDGRGCWRAFDATMAEALRRRRRLEADLRDALAHGQR-GLSLVYQPQFCLN 527 Query: 184 SRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTMAHALELGDKM 238 R I +EA+V+ P + G I + A A Sbjct: 528 LNRFIGYEALVRWTHPELGAIPPCDFIPVAEEAGLITALGQWILSRALETAATWP-AHLN 586 Query: 239 ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAA 298 +++NL P+ + E D ++ E+ P+++ +E TE +I D ++ LK Sbjct: 587 LAVNLSPLQIC-EGDLTRYVQQELVRTGFRPQRLELEVTEGVLIENTDRALHVLRQLKGM 645 Query: 299 GISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPR---------QAIIQAII 349 G+ +A+D FG G++ L L F D IKI + + + S R +AI++A+I Sbjct: 646 GVRIAMDDFGTGYSSLSYLQTFPFDLIKIDRSFVEGLTPSPDRKMHKHGIPAEAIVRAVI 705 Query: 350 KCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 ++ I V A GV T E+ L G + QG L + + Sbjct: 706 GMAHAINIPVIAEGVETQEQMDLLRDMGADAVQGYLIGRPQ 746 >UniRef50_A5VDE7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Sphingomonas RepID=A5VDE7_SPHWW Length = 887 Score = 290 bits (743), Expect = 7e-77, Method: Composition-based stats. Identities = 71/283 (25%), Positives = 118/283 (41%), Gaps = 19/283 (6%) Query: 120 TYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTIND---HFAF 176 + L + ++E A D+ L L +++ H + Sbjct: 501 LVRNADLALYAAKADGKGVHRFYEPEMH------ASAKDRRLLEMDLRGVMSESGLHLVY 554 Query: 177 HPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTMAHA 231 P+VD S I+ FEA+V+ + SPS + G I + L A Sbjct: 555 QPVVDAGSEAIVCFEALVRWDHPTRGAVSPSDFIPVAEEIGLI--PQIGEWVLRTACLEA 612 Query: 232 LELGD-KMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAE 290 D +++N+ P+ N P +L+ + A L P ++ +E TE ++ Sbjct: 613 ANWPDPVRVAVNISPIQFAN-PSLPGIVLSALAAAQLPPHRLELEITEGVFLNDDAATDA 671 Query: 291 AIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPR-QAIIQAII 349 LKA G+ A+D FG G++ L L + ++IKI Q + G R AII+AI+ Sbjct: 672 MFARLKAIGVRFALDDFGTGYSSLGYLKKAPFNKIKIDQSFVRGAAVPGNRNAAIIRAIV 731 Query: 350 KCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLN 392 SLE++ +A G TP+E + S G QG +F + L+ Sbjct: 732 ALAESLEMETTAEGAETPDELALIRSLGCSHIQGYIFGRPMLS 774 >UniRef50_A6WKV6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Shewanella RepID=A6WKV6_SHEB8 Length = 921 Score = 290 bits (742), Expect = 7e-77, Method: Composition-based stats. Identities = 62/304 (20%), Positives = 123/304 (40%), Gaps = 16/304 (5%) Query: 97 LRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYF-EIPAEDSWLFIAD 155 LRL V +++ + + +R ++ E + S+ + Sbjct: 616 LRLTASMGV--SLYPNDGTDADTLLRNADAAMYRAKNDGRNNYAFYTESLTQQSFEHL-- 671 Query: 156 GSDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRK 210 L + + + P +D +SR+ + FEA+++ ++ SP+ K Sbjct: 672 KLQSALYGAIEQNAL--YLMYQPKLDLVSRKTVGFEALLRWHDPQLGLISPAVFIPVAEK 729 Query: 211 DGEIYTADLKSKALAFTM-AHALELGDK--MISINLLPMTLVNEPDAVSFLLNEIKANAL 267 G I+ L A L G I++N+ + V + + L Sbjct: 730 IGLIHEIGLWVLETACRQGMRWLREGKHFGRIAVNV-AGQQLQRSSFVDDVKRVLAETGL 788 Query: 268 VPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKI 327 + + +E TES ++ D +K L GI +++D FG G++ L L + ++KI Sbjct: 789 PAKHLELEVTESVMMQNPDLAIRDLKRLGDLGIELSVDDFGTGYSSLNYLKKLPIHKLKI 848 Query: 328 SQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFA 387 Q + ++ AI +A+I +L++ + A GV T E+ +L+ + QG LF+ Sbjct: 849 DQSFVRDIPFDTNNTAIAKAVIALGHALKLDIIAEGVETKEQADFLQQNQCDQAQGYLFS 908 Query: 388 KAKL 391 + +L Sbjct: 909 RPQL 912 >UniRef50_B8GSM4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GSM4_THISH Length = 648 Score = 290 bits (742), Expect = 8e-77, Method: Composition-based stats. Identities = 67/294 (22%), Positives = 114/294 (38%), Gaps = 12/294 (4%) Query: 104 DVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDS 163 V +VF + + ++ +S + + +L Sbjct: 346 SVGISVFPYDGDDADTLIKNADAAMYDAKQRGRNSFQFY-TKDINSQTYRQLILENQLVK 404 Query: 164 CALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTAD 218 H + P VD +S +++ EA+V+ P+ + G I Sbjct: 405 ALAREEFEVH--YQPQVDVISGQVVGAEALVRWRHPEKGLQPPANFIAIAEETGIIEGLG 462 Query: 219 LKSKALAFTMAHALELGD---KMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVE 275 L ISINL + D V N I++ + P I +E Sbjct: 463 AWVLQKVCQDIRQLTRDGYRIPRISINLSARQF-RQSDLVEQCRNTIRSAGIAPAYIELE 521 Query: 276 FTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNV 335 TES ++ D ++ L A G+ +AID FG G++ L L F D +KI + + ++ Sbjct: 522 LTESTIMKDIDIAVGMLRQLNALGVRLAIDDFGTGYSSLNNLKHFPIDTLKIDKSFVRDI 581 Query: 336 HKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 +AI+ AI+ SLE++V A GV T E+ +L+ G E+ QG F++ Sbjct: 582 PGDRDDEAIVTAIVALAKSLELEVVAEGVETREQLGFLKRLGCEIVQGYFFSRP 635 >UniRef50_B5ZWQ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=14 Tax=Rhizobium/Agrobacterium group RepID=B5ZWQ7_RHILW Length = 794 Score = 290 bits (742), Expect = 8e-77, Method: Composition-based stats. Identities = 56/291 (19%), Positives = 117/291 (40%), Gaps = 14/291 (4%) Query: 115 SKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTIND-- 172 S + ++ +R ++ +F+ +++ + ++++S I + Sbjct: 486 STAEELCNNADTALYRVKHDGRGRACFFDAEMDEAAR-----NRRQIESDLRHAIIRNQL 540 Query: 173 HFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFT 227 H ++ PI++ S I +EA+++ + P + G I A Sbjct: 541 HVSYQPILNAQSVEISGYEALMRWHRPGHGLTEPDIFIPVAEESGSIVQLGEWILQQACR 600 Query: 228 MAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDE 287 A I++N+ P+ + P+ + + L P+++ +E TE+ +I D Sbjct: 601 EAARWPQP-LTIAVNVSPVQFM-LPNLCERVEAVLDETGLAPDRLELEITEAALIRDRDR 658 Query: 288 FAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQA 347 ++ L+ G+ + +D FG G++ L L F D+IK+ + + ++I++A Sbjct: 659 VMATLQRLRKLGVHIVMDDFGTGYSSLSNLRSFPFDKIKVDRSFTGVLEHDAAARSIVRA 718 Query: 348 IIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIA 398 II SL + V GV T + + G QG L K + A Sbjct: 719 IIGLGHSLGMPVVTEGVETEMQRRIVVEEGCAQVQGLLLGKPDIEPSMKPA 769 >UniRef50_B6BGL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGL3_9PROT Length = 671 Score = 290 bits (742), Expect = 8e-77, Method: Composition-based stats. Identities = 58/284 (20%), Positives = 117/284 (41%), Gaps = 16/284 (5%) Query: 116 KFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF- 174 +L + + + + ++F ++ + + L+S N+ Sbjct: 379 DAELLLRNADVAMYDAKQSGRSKYSFF-----NADMLNLSSNRLMLESELHKALENNELF 433 Query: 175 -AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLK---SKALA 225 F P V + +I+ EA+++ SP G I Sbjct: 434 LLFQPQVSLWNEKIVGVEALIRWQHPTKGLISPLDFIPIAENSGLIMPIGEWIIDQACDQ 493 Query: 226 FTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 + + + +SIN+ ++++ D S++ I+ + + +E TES ++ Sbjct: 494 LALWKDTHMSEATLSINVSAKQVLHQ-DLYSYIEAAIERTKIDGRFLELEITESVIMENI 552 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 +E + LK G+S+AID FG G++ L L + D++KI +E I ++ AI Sbjct: 553 NETVRILSRLKKLGVSIAIDDFGTGYSSLSYLKKLPIDKLKIDREFIKDIPNDKDDIAIT 612 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 AII SL +++ A G T E +L+++ ++ QG ++K Sbjct: 613 NAIISMSKSLSLKIVAEGPETKEHIEFLQNSKCDIAQGFYYSKP 656 >UniRef50_A5VGA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VGA6_SPHWW Length = 813 Score = 290 bits (742), Expect = 8e-77, Method: Composition-based stats. Identities = 85/390 (21%), Positives = 145/390 (37%), Gaps = 39/390 (10%) Query: 8 RSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGPEEQVKMIYRAICQ 67 R H D+ +K + + A R N G G E ++Y + Sbjct: 438 RGHSAGDQALKMVAAALKDAVRENEHVARLG--------------GDEFAAAILY---RE 480 Query: 68 DPRHYNIVELLCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQ 127 D + V L A G A DL +H + A + + + + L Sbjct: 481 DYELADFVTRLSTGLAAINAGNA----HDLSVHASLGI--ATYPADSQDREQLCNHADLA 534 Query: 128 FFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF--AFHPIVDPLSR 185 +R E+ Y+E + ++L + + P Sbjct: 535 MYRAKGTVGERICYYE-----KGMDEQARERRQLAADLRGAAARGEMTILYQPQRSLKDD 589 Query: 186 RIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTMAHALELGD-KMI 239 R+ +EA+++ P + GEI L L A GD + Sbjct: 590 RVNGYEALLRWTHPKRGLVPPDIFIPVAEETGEILA--LGEWVLRQACEEAARWGDGLTV 647 Query: 240 SINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAG 299 +INL + L ++ + + L P ++ +E TE+ +I+ ++ LKA G Sbjct: 648 AINLSAVQL-SQASLPESVAQTLLETGLAPRRLELEITETAIIADKPRALHILRRLKAMG 706 Query: 300 ISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQV 359 I++AID FG G++ L L+ F D+IKI + + + +AII+A++ SL + V Sbjct: 707 IAIAIDDFGTGYSSLDTLNSFPFDKIKIDKSFVIGSEERPQARAIIRAVLALGHSLGVPV 766 Query: 360 SAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 A GV T L + G + QG LF + Sbjct: 767 LAEGVETSGHVDLLVAEGCDQVQGYLFGRP 796 >UniRef50_Q984Y8 Mll7787 protein n=2 Tax=Mesorhizobium RepID=Q984Y8_RHILO Length = 724 Score = 290 bits (742), Expect = 9e-77, Method: Composition-based stats. Identities = 65/287 (22%), Positives = 117/287 (40%), Gaps = 11/287 (3%) Query: 108 AVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALS 167 AVF + + +R +FE D+ + + +LD+ Sbjct: 424 AVFPQDGRDADTLLKNADTALYRAKSEGRNLYRFFEPAM-DAIVQARRALEVDLDAAL-- 480 Query: 168 PTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSK 222 P F PI++ S II EA+++ + + P A + G I + Sbjct: 481 PRQEFDLDFQPIMNIASGEIIGAEALMRWHSPARGTVAPDAFIPVAEETGLIVPLGEWAL 540 Query: 223 ALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVI 282 A A + I++N+ + L + +++ + + + Q+ +E TE+ ++ Sbjct: 541 RKACAAAASWP-PGLRIAVNVSAVQLKS-GGFARSVISALAFSGVPAGQLELEITETVLM 598 Query: 283 SRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQ 342 + ++ L+ GI +A+D FG G++ L L RF D+IKI + I ++ + Sbjct: 599 DESKAVLKTLRQLRDLGIRIALDDFGTGYSSLAYLRRFPVDKIKIDRSFIRDMG-NRDTA 657 Query: 343 AIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 AI++ II L I V+A GV T + L G E QG L Sbjct: 658 AIVRTIIGLGNELGIVVTAEGVETEVQLDMLRDNGCEEAQGYLIGVP 704 >UniRef50_A4X020 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodobacter sphaeroides ATCC 17025 RepID=A4X020_RHOS5 Length = 875 Score = 290 bits (742), Expect = 9e-77, Method: Composition-based stats. Identities = 63/319 (19%), Positives = 116/319 (36%), Gaps = 15/319 (4%) Query: 82 APARRFGKAGMELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTY 141 R + + R + + + + + Sbjct: 555 IAERVLARISAPIALPNQTVRVTASMGIAMDDVANRAELVRTADIALYEAKRDNRGTYRF 614 Query: 142 FEIPAEDSWLFIADGSDKELDSCALSPTINDHFA--FHPIVDPLSRRIIAFEAIVQKNED 199 F+ E + + + N+ F + P+ + S RI FEA+++ Sbjct: 615 FDGAMEIRLR-----ERTAIIADLTAALGNNEFVVHYQPLYELASHRICGFEALLRWTHP 669 Query: 200 -----SPSAIAVGQRKDGEIYTADLKSKALAFTMAHALELGDKMISINLLPMTLVNEPDA 254 SP G I+ A T A D I++NL P + Sbjct: 670 VRGLVSPEVFIPIAEDTGLIHQIGAWVLRTACTAAADWP-ADVRIAVNLSPRQF-RDLGL 727 Query: 255 VSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGL 314 + + ++ L P ++ +E TE+ ++ + L GI +A+D FG G++ L Sbjct: 728 PTMVARVLEETGLRPNRLELEVTEAALLDDSGSNLDIFAQLNRMGIRIALDDFGTGYSAL 787 Query: 315 LLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLE 374 L +F ++KI + IT + S AI+ AI +L I+V+A GV T +++ WL+ Sbjct: 788 SYLQKFPFAKLKIDRSFITGLPDSESSMAIVSAICSMAHALSIRVTAEGVETRDQFDWLQ 847 Query: 375 SAGIEMFQGDLFAKAKLNG 393 + QG L ++ G Sbjct: 848 TR-CNEIQGYLISRPVPAG 865 >UniRef50_Q2W7U0 Predicted signal transduction protein containing a membrane domain n=3 Tax=Magnetospirillum RepID=Q2W7U0_MAGSA Length = 831 Score = 289 bits (741), Expect = 9e-77, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 117/278 (42%), Gaps = 12/278 (4%) Query: 120 TYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPI 179 + + +F + + +D EL H F P+ Sbjct: 296 LMRNATAALQQAKQAGRNTFRFFTPAMDARAQARSRLAD-ELSGALSQG--EFHLVFQPL 352 Query: 180 VDPLSRRIIAFEAIVQKNE-----DSPSAIAVGQRKDGEIYTAD---LKSKALAFTMAHA 231 VD S ++ A EA+++ + SP + G I L + + Sbjct: 353 VDVKSGKVNAAEALLRWHNRYLGVVSPDQFVPLAEEIGLIRPIGEWLLTAACREALVWQG 412 Query: 232 LELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEA 291 + LG+ I++N+ P + D V + ++ L P + +E TE ++S +E Sbjct: 413 MGLGEINIAVNISPRQF-QQGDIVGIIRRALEDTRLPPWLLTIEITEGLLLSNGEEILAK 471 Query: 292 IKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKC 351 +++++ G+S+++D FG G++ L L F D +KI + I ++ +++AII Sbjct: 472 MEAIRTLGVSLSVDDFGTGYSSLSYLKSFPVDVLKIDRSFIADMGDHSDDATMVEAIIAL 531 Query: 352 CTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 SL ++V A GV T ++ ++ + G ++ QG F+ Sbjct: 532 GHSLHLEVVAEGVETKQQLDFITAQGCDVAQGYYFSPP 569 >UniRef50_A6LW88 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Clostridiales RepID=A6LW88_CLOB8 Length = 981 Score = 289 bits (741), Expect = 9e-77, Method: Composition-based stats. Identities = 64/286 (22%), Positives = 120/286 (41%), Gaps = 16/286 (5%) Query: 116 KFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFA 175 + +R L + + F+ ++++ ++ + N+ Sbjct: 692 DSSTILRNADAAMYRAKELGKNRFSLFDPE-----MYLSLERKTSIERILRTAVDNNELI 746 Query: 176 --FHPIVDPLSRRIIAFEAIVQKNE-----DSPSAIAVGQRKDGEIYTADLKSK---ALA 225 + P D + +I FEA+++ N SP+ + G I L Sbjct: 747 INYQPQYDLQANKIFGFEALLRLNSRELGFISPAEFIPIAEECGYITQLTLWVLKESCRQ 806 Query: 226 FTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 IS+N+ + L E + + + I+++++ P I +E TE+ ++ F Sbjct: 807 SAKWFEAGYKFNSISVNISSVDL-QETNFLDNVKEIIESSSVNPNMIELEITETVLMKSF 865 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 D +K L GI +A+D FG G++ L L R + +KI + I N+ + +AII Sbjct: 866 DSSIGILKKLMDMGIRIALDDFGTGYSSLSYLRRIPINTLKIDKSFIDNISSNKKEEAII 925 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 + II+ S+E++V A GV T + + LE + QG F+K L Sbjct: 926 KNIIQMAHSMELKVIAEGVETEGQLLILERMKCDYIQGYYFSKPLL 971 >UniRef50_B9ZNS8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZNS8_9GAMM Length = 944 Score = 289 bits (741), Expect = 9e-77, Method: Composition-based stats. Identities = 66/308 (21%), Positives = 115/308 (37%), Gaps = 18/308 (5%) Query: 93 ELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLF 152 +L H + +F + + L +R +++ L Sbjct: 619 QLAGQNRHVTPSIGATLFSGRSLGVEEVLKQADLAMYRAKNAGRNTVRFYDPE-----LH 673 Query: 153 IADGSDKELDSCALSPTINDHF--AFHPIVDPLSRRIIAFEAIVQKNE-----DSPSAIA 205 A + EL++ D F + P VD R+I E +++ SP+ Sbjct: 674 RAVEARFELENELRHALDEDRFSVVYQPQVD-AEGRVIGAELLLRWEHAQRGAISPAEFI 732 Query: 206 VGQRKDGEIYTADLKSKALAFTM----AHALELGDKMISINLLPMTLVNEPDAVSFLLNE 261 + G I K A H D +S+N+ +P V L Sbjct: 733 PVAEQTGLIVPIGRKVLRTACAQLGAWQHTAAFRDLTLSVNISARQF-RDPHFVPHLREI 791 Query: 262 IKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQ 321 ++ +++ +E TES ++ D I L+A G+ A+D FG G++ L L + Sbjct: 792 LQETGAPGDRLKLELTESMLLEEIDTVVAHIDELRALGVEFALDDFGTGYSSLAYLKQLP 851 Query: 322 PDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMF 381 ++KI Q + +V AI Q ++ +L++ V A GV T E+ +L G F Sbjct: 852 LAQLKIDQSFVRDVLDDPNDAAIAQMVVNLARTLDLDVIAEGVETVEQRAFLFGLGCRHF 911 Query: 382 QGDLFAKA 389 QG L+ Sbjct: 912 QGFLYGYP 919 >UniRef50_Q1YK72 Putative sensory protein, diguanylate cyclase n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YK72_MOBAS Length = 632 Score = 289 bits (741), Expect = 1e-76, Method: Composition-based stats. Identities = 56/281 (19%), Positives = 114/281 (40%), Gaps = 11/281 (3%) Query: 118 QLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFH 177 Q + +R YFE D L + L + + Sbjct: 319 QDLLRQADMAMYRAKGEGRGTFRYFEDAMNDR-LVARKKVELALRHAIARNEL--QLHYQ 375 Query: 178 PIVDPLSRRIIAFEAIVQK-----NEDSPSAIAVGQRKDGEIYTADLKSKALAFTMAHAL 232 P +D + + EA+++ P+ + G I + A Sbjct: 376 PQIDMKTNSVKGVEALIRWYRGEDGIVQPNDFIQLAEETGLIIPIG--EWVIREACRQAG 433 Query: 233 ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAI 292 + + ++N+ P+ + V + + + + P ++ +E TE+ ++S DE E + Sbjct: 434 DWPELTFAVNVSPVQF-RHGNLVETVRSALAEAGVEPHRLEIEITENVLLSHTDETIETL 492 Query: 293 KSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCC 352 ++L+A G+ +A+D FG G++ L L RF D+IKI + +++ +I+ A+I Sbjct: 493 RALQAMGVRIAMDDFGTGYSSLSYLRRFPFDKIKIDRSFTSDLGTCFDADSIVAAVINLG 552 Query: 353 TSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNG 393 ++ + +A GV T E+ L + G QG L+++ + Sbjct: 553 AAMGMVSNAEGVETLEQAELLRAQGCNEVQGFLYSRPVPSA 593 >UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=B3EBJ5_GEOLS Length = 965 Score = 289 bits (741), Expect = 1e-76, Method: Composition-based stats. Identities = 53/304 (17%), Positives = 111/304 (36%), Gaps = 16/304 (5%) Query: 96 DLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIAD 155 D ++ + ++F + + + + ++ +F L + Sbjct: 642 DHEVYTSSSIGISLFPRDGRDAEELLKNADMAMYQAKEAGRNTCHFFSPE-----LNMRA 696 Query: 156 GSDKELDSCALSPTINDHF--AFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQ 208 L+S + F + P ++ S I EA+++ P+ Sbjct: 697 TERLLLESTMRRALEREEFFLVYQPQMELRSGHIAGIEALLRWRHPDLGVVPPNNFIPIA 756 Query: 209 RKDGEIYTAD---LKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKAN 265 + G I L +++N+ + + + + Sbjct: 757 EETGLIVPLGEWVLAEACRQAVRWQQEGQPPLRMAVNVSARQF-RQRNLGLRIEKILMET 815 Query: 266 ALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRI 325 L P + +E TES V+ +E ++ LK GI+++ID FG G++ L L F DR+ Sbjct: 816 GLDPALLELELTESAVMENPEEAILTLRQLKKMGITLSIDDFGTGYSSLSHLKHFPIDRL 875 Query: 326 KISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDL 385 KI + + +V + I +AII S+++ V A G+ E+ ++ + QG Sbjct: 876 KIDRSFVKHVTRDHNDATIAEAIIALAHSMKLTVVAEGIEHSEQMEFMHQRHCDTMQGYY 935 Query: 386 FAKA 389 ++ Sbjct: 936 LSRP 939 >UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K3A1_AZOSB Length = 818 Score = 289 bits (741), Expect = 1e-76, Method: Composition-based stats. Identities = 58/288 (20%), Positives = 105/288 (36%), Gaps = 19/288 (6%) Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 T + ++ ++ + L A L++ Sbjct: 525 TDDATQLISNADAALYQAKEAGRNVYRFYT-----ADLTRAAHERLGLEAALRRGLERGE 579 Query: 174 FA--FHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAF 226 F F P+V ++ EA+V+ N + P + G I L L Sbjct: 580 FVLHFQPVVALDKGEVVGAEALVRWNHPTEGMIAPLRFIPLAEETGLIVP--LGEWVLES 637 Query: 227 TMAHALELGD----KMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVI 282 E D I++NL D + + + + + +E TES V+ Sbjct: 638 ACRQGREWLDCGRPLTIAVNLSTRQF-RAGDLTATVRDILDRTGFPAALLELEITESTVM 696 Query: 283 SRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQ 342 D + +LK G+ ++ID FG G++ L L RF D +KI + + ++ + Sbjct: 697 EDADRAVATLAALKGLGVRLSIDDFGTGYSSLAYLKRFAVDALKIDRSFVRDIADDENDR 756 Query: 343 AIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 I+ ++ + + V A GV T E+ +L S G E +QG L + + Sbjct: 757 MIVATVVAMAHQMRLGVIAEGVETAEQLAFLRSLGCEAYQGYLVGRPQ 804 >UniRef50_Q07PV4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodopseudomonas palustris BisA53 RepID=Q07PV4_RHOP5 Length = 928 Score = 289 bits (741), Expect = 1e-76, Method: Composition-based stats. Identities = 56/278 (20%), Positives = 113/278 (40%), Gaps = 12/278 (4%) Query: 120 TYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPI 179 + L + +FE E + + + +L + + P Sbjct: 638 LLKNADLAMYGAKAEGRRTYRFFEPAMEARVIAL-RTMEIDLRQAIADGGFEIY--YQPQ 694 Query: 180 VDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTMAHALEL 234 + ++ EA+++ SP+ + G I L L + A A++ Sbjct: 695 LRLCDDKVTGCEALLRWRHPVRGMISPAEFIPVAEETGLIN--QLGEWVLVESCAEAVKW 752 Query: 235 -GDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIK 293 GD +S+N+ P+ +E A+ + + + L ++ +E TE+ +I + + Sbjct: 753 PGDVKVSVNVSPVQFGSEGFAL-KVAAALANSGLPAHRLELEITEAVLIRDDEAALTMLH 811 Query: 294 SLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCT 353 ++A G+ +A+D FG G++ L L RF D+IKI + I N+ + I++A++ Sbjct: 812 QIRALGVGIALDDFGTGYSSLSYLRRFPFDKIKIDRSFIKNIEDANGSAHIVKAVVDIAA 871 Query: 354 SLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 + + +A GV T + L G QG L++ Sbjct: 872 AQRMTTTAEGVETEGQLNELRRLGCSEMQGYLYSPPVP 909 >UniRef50_A1W268 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidovorax sp. JS42 RepID=A1W268_ACISJ Length = 1108 Score = 289 bits (741), Expect = 1e-76, Method: Composition-based stats. Identities = 59/282 (20%), Positives = 106/282 (37%), Gaps = 12/282 (4%) Query: 116 KFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFA 175 + +R +F + + + D+ Sbjct: 811 TASTLASAAEVAMYRVKQDGRNGLRFFAPEMQAHTQRSLELAAGLKDAAHRGELF---LV 867 Query: 176 FHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSK---ALAFT 227 F P S + EA+++ SP+ + G I D A Sbjct: 868 FQPQRTLGSGALAGAEALLRWRHPRWGLVSPAEFIPIAEQSGSIVAIDFWVVEQVAQQLR 927 Query: 228 MAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDE 287 A L ++++N+ P V L+ ++ + P++I VE TE+ + ++ Sbjct: 928 AWDAAGLPPLVVAVNVSAAQFAR-PHFVEELVRILQRMDISPQRIEVELTEAVALKNPEQ 986 Query: 288 FAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQA 347 I+ L G VA+D FG G++ + L R+ D++KI Q + + QAI+ A Sbjct: 987 AETTIRRLHEVGFRVALDDFGTGYSSMSYLKRYAIDKLKIDQSFVRELAHQASDQAIVTA 1046 Query: 348 IIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 IIK SL + A GV T E+ L++ G + QG +++ Sbjct: 1047 IIKMAHSLRMATIAEGVETAEQAALLQACGCDEMQGYWYSRP 1088 >UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNA9_9PROT Length = 1399 Score = 289 bits (741), Expect = 1e-76, Method: Composition-based stats. Identities = 63/302 (20%), Positives = 119/302 (39%), Gaps = 18/302 (5%) Query: 99 LHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSD 158 LH + AVF ++ + + +F + + A Sbjct: 1090 LHSTSSIGIAVFPADGESVEVLMQNADAAMYHAKSAGRNNVQFFT-----ASMNEAASDR 1144 Query: 159 KELDSCALSPTINDHFA--FHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKD 211 ++L+ F + P VD RR+ A EA+++ P+ Sbjct: 1145 RQLEEDLHLALQQKQFVLHYQPQVDAQ-RRVFAVEALLRWQHPHHGLVPPARFVPLAEDT 1203 Query: 212 GEIYTADLKSKALAFTMAHAL----ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANAL 267 G I A A +++N+ +PD V L I + Sbjct: 1204 GLIVPIGQWVLETACAQIKAWSVDARTRKLQVAVNVSARQF-RQPDFVELLRQAIDNSGA 1262 Query: 268 VPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKI 327 P ++ +E TES V+ + + + ++K G++ ++D FG G++ L L+R D++KI Sbjct: 1263 NPARLKLELTESLVLDNVADTIDKMNAIKLLGVTFSMDDFGTGYSSLSYLTRLPLDQLKI 1322 Query: 328 SQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFA 387 + + + ++ I Q I+ SL ++V A GV T + +L+S G + +QG LF+ Sbjct: 1323 DRAFVCRLPENRSDAVIAQTIVTMGRSLGLKVVAEGVETEAQRQFLDSHGCDGYQGFLFS 1382 Query: 388 KA 389 + Sbjct: 1383 RP 1384 >UniRef50_C4ZM30 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZM30_THASP Length = 1002 Score = 289 bits (741), Expect = 1e-76, Method: Composition-based stats. Identities = 71/309 (22%), Positives = 125/309 (40%), Gaps = 14/309 (4%) Query: 92 MELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWL 151 + L H + +F + + R +F + Sbjct: 692 LGLASGPYHVGASLGLTLFRGRNAAADAVLKQAEVAVARAKDDGRNLIRFFSEAMQ---A 748 Query: 152 FIADGSDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQ-----KNEDSPSAIAV 206 +A ++ EL A + P +D + R+I EA+++ SP+A Sbjct: 749 VVAARAELELKLRAALACNGFRLYYQPQLD-RNGRVIGAEALIRCFDAEGEMISPAAFIP 807 Query: 207 GQRKDGEIYTADLKSKALAFTMAHALEL----GDKMISINLLPMTLVNEPDAVSFLLNEI 262 + G I A A + +SIN+ ++PD V + I Sbjct: 808 LAEETGLIVPIGEWVLETACAQLRAWQRTPSTAGLSLSINVSARQF-HQPDFVGKVAAAI 866 Query: 263 KANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQP 322 + + + P + +E TES VI + ++ +KA G+ A+D FG G++ L L R Sbjct: 867 ERHRIRPGGLEIELTESVVIGDIETTVLRMRQIKALGVRFALDDFGTGYSSLSYLKRLPF 926 Query: 323 DRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQ 382 D++KI Q + ++ K +AI++AI+ SL+++V A GV T + L + G E+FQ Sbjct: 927 DQLKIDQMFVRDMEKDTSSEAIVRAILALSRSLDLKVVAEGVETAAQHELLLTRGCELFQ 986 Query: 383 GDLFAKAKL 391 G LF + Sbjct: 987 GYLFGRPVP 995 >UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAD3_METSD Length = 751 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 59/284 (20%), Positives = 111/284 (39%), Gaps = 16/284 (5%) Query: 118 QLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFA-- 175 +L + + L +F + + IA EL+S + F Sbjct: 459 ELLTKNADAAMYHAKSLGRNNYQFFTRAMNERVMEIA-----ELESKLRRAVERNEFVLY 513 Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTM-- 228 + P +D + +++ EA+++ S P G I L A Sbjct: 514 YQPKIDIRTGQVVGAEALIRWQHPSWGLVAPDRFIPIAEDSGLIRPIGLWVMREACRQNQ 573 Query: 229 -AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDE 287 A L +++NL + L + + + + + + L P+ + +E TES I E Sbjct: 574 EWQAAGLARIPVAVNLSTVQL-RQHNFLQEVSEILLMSGLEPDYLELEVTESVAIHAETE 632 Query: 288 FAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQA 347 + L++ G+ +A+D FG G++ L L R + +KI + I ++ II A Sbjct: 633 VINWLHKLRSMGVKLALDDFGTGYSSLSYLKRLPINNVKIDKSFIRDIETDPDDATIITA 692 Query: 348 IIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 II+ L + V A GV + +L+ G + QG + ++ Sbjct: 693 IIRMSHGLRLNVIAEGVENINQLEFLKKEGCDQMQGFIASRPVP 736 >UniRef50_A4W933 Diguanylate cyclase/phosphodiesterase n=3 Tax=Enterobacteriaceae RepID=A4W933_ENT38 Length = 642 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 65/279 (23%), Positives = 114/279 (40%), Gaps = 14/279 (5%) Query: 120 TYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFA--FH 177 Y L + + F W+ + L+ N F + Sbjct: 362 LYKFADLALYEAKNEGAGKIKVF-----RQWMLDKLQESRTLEHDMALALANKEFVVYYQ 416 Query: 178 PIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTMAHAL 232 PIVD ++ I ++EA+++ SP K G I +A A + Sbjct: 417 PIVDSFTQEIYSYEALIRWIHPLKGILSPDTFIPVAEKTGMINEMGKSMLEMACREAVSW 476 Query: 233 ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAI 292 + IS+N+ P+ L ++ +++ + L E++ +E TES + + + Sbjct: 477 VIP-AKISVNVSPVQLSSKA-FAGIVVSILNETGLSAERLELEVTESSLFTESKTPMNTL 534 Query: 293 KSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCC 352 L+ G+ ++ID FG G++ L LSR D+IKI + + +V II+ I Sbjct: 535 NRLRTLGVKISIDDFGTGYSSLSRLSRLAFDKIKIDKSFVNSVSTQEDALNIIRLITGMA 594 Query: 353 TSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 SL ++ A GV T E+ L++ G + QG LF K + Sbjct: 595 KSLNMKTVAEGVETQEQLESLQALGCDFIQGYLFGKPQP 633 >UniRef50_A4Y0E0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=23 Tax=Pseudomonas RepID=A4Y0E0_PSEMY Length = 766 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 61/309 (19%), Positives = 115/309 (37%), Gaps = 16/309 (5%) Query: 93 ELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLF 152 L + L+ + ++F + + F+ E ++ D Sbjct: 441 RLDEHELYIGASIGISLFPDDADSVEQVLRNADSALFKAKSSGREGYAFYVQELTDYAR- 499 Query: 153 IADGSDKELDSCALSPTINDHF--AFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIA 205 EL S N + P+ D + + EA+V+ P+ Sbjct: 500 ----QRVELASSLRHALDNHELRVFYQPLHDLENGNPVGMEALVRWQHPQRGLIPPAEFI 555 Query: 206 VGQRKDGEIYTADLKSKALAF---TMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEI 262 +G I D A +A + +++N+ L + + + + Sbjct: 556 PIAEDNGMIGPIDAWVLEQACGQMMRWNAEGSALRFVAVNVSSR-LFSRGELDLKVAQVL 614 Query: 263 KANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQP 322 L P+Q+ +E TES ++ D + L+A G+ +AID FG G++ L L R Sbjct: 615 AETGLSPQQLELEVTESAIMEDPDAALSLLTRLRALGVRLAIDDFGTGYSSLARLKRLPV 674 Query: 323 DRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQ 382 D++K+ Q + + AI +A+I SL + V A G+ +P + +L + G + Q Sbjct: 675 DKLKLDQSFVRGLPDDIEDAAIARAVIALGHSLGLNVLAEGIESPAQVDFLRALGCDYGQ 734 Query: 383 GDLFAKAKL 391 G F + Sbjct: 735 GYHFGRPAP 743 >UniRef50_Q1YLW9 Putative sensory box/GGDEF family protein n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YLW9_MOBAS Length = 792 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 108/279 (38%), Gaps = 16/279 (5%) Query: 120 TYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFA--FH 177 + L + +FE L+ + + Sbjct: 492 LLRNADLALYEAKAAGKNTFCFFESEMAQRLRDRHR-----LEYDLRCAVERNELVLNYQ 546 Query: 178 PIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTMAHAL 232 PIVD +R+ + FEA+V+ P + G I + + L +A Sbjct: 547 PIVDSRTRQTLGFEALVRWEHPLHGRVQPDHFIPLAEQTGAIC--GIGAWVLREACRNAA 604 Query: 233 ELGDKM-ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEA 291 GD + +++N+ ++ + + + ++ L +++ +E TES I + Sbjct: 605 SWGDHLTVAVNVSVDQF-RHGTIMTDVEDALASSGLAADRLELEITESLFIDDPEAVVTV 663 Query: 292 IKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKC 351 + L++ G+ +A+D FG G++ L L +F D++KI + + + I++ I+ Sbjct: 664 LHRLRSLGVRIALDDFGTGYSSLSYLRKFPFDKLKIDRSFVNAIKDDRIAHGILETILAL 723 Query: 352 CTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 L++ V+A GV E+ L FQG F++ Sbjct: 724 GRVLDLSVTAEGVEDAEQIDILTRMTCNQFQGYYFSRPM 762 >UniRef50_B0CE49 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor, putative n=2 Tax=Acaryochloris marina MBIC11017 RepID=B0CE49_ACAM1 Length = 880 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 64/285 (22%), Positives = 116/285 (40%), Gaps = 21/285 (7%) Query: 118 QLTYDDRALQFFRTFVLATEQSTYFEIPAE---DSWLFIADGSDKELDSCALSPTINDHF 174 + D +R F +S L + + + + L H Sbjct: 578 EELLQDSDTAMYRAKKQGKNCFEVFSSGMRAQVNSQLQLETDLQRAISNNEL------HL 631 Query: 175 AFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTM- 228 + PIVD + I+ FEA+++ N PS G + + D A Sbjct: 632 VYQPIVDLNTENIVGFEALLRWNHPERGLVPPSEFIPVAEDAGLMVSIDWWVLTEACQQM 691 Query: 229 AHALEL----GDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISR 284 AH L + + I++N+ + + + I+ + P + +E TE ++S Sbjct: 692 AHWLNIYPGSTELTINVNISAHQFL-QSTFCEKVNAIIQETGMKPHHLKLEITEGVILSN 750 Query: 285 FDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAI 344 +E + +LK GI +AID FG G++ L L F D +K+ ++ + + AI Sbjct: 751 APNISEQLNNLKKLGIHLAIDDFGTGYSSLSYLYAFPLDVLKVDYSFVSRMDQD-NGLAI 809 Query: 345 IQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 ++ I+ +L ++V A GV T + +L+ G E QG LF++ Sbjct: 810 VRTIVNLGQNLNMKVVAEGVETKIQQEYLQEMGCEFAQGYLFSRP 854 >UniRef50_D2M2P9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2M2P9_BACS4 Length = 696 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 62/295 (21%), Positives = 120/295 (40%), Gaps = 18/295 (6%) Query: 108 AVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAE-DSWLFIADGSDKELDSCAL 166 + + + + + L ++ +F E +S+ A L + Sbjct: 395 STYPESGEDISVILKNADLAMYKAKETKENSFEFFTPEMEENSYKNFA------LQNDLR 448 Query: 167 SPTINDHFA--FHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADL 219 N+ F + P V + +++ EA+++ N SP G I Sbjct: 449 RAITNNEFELYYQPKVSASTEKVVGVEALIRWNHPTLGMVSPGHFIPIAEDTGLIVPIGE 508 Query: 220 K---SKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEF 276 + ++S+N + ++ + V+ + N ++ N + I VE Sbjct: 509 WVFDAVCKQVKRWENTGFPPLVVSLNFSAIQML-QKGLVTKVKNLLEKNQVEGHWIEVEM 567 Query: 277 TESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVH 336 TES ++ ++ ++ LK GI +AID FG G++ L L +++ + IK+ + I ++H Sbjct: 568 TESLILEHDNDILNKLEGLKQLGIHIAIDDFGTGYSSLSYLKKYKFNTIKLDKSFINDIH 627 Query: 337 KSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 S QAII II+ L ++V A GV E+ L+ + QG F++ K Sbjct: 628 TSADNQAIITFIIQLSNQLNMKVVAEGVEIKEQHDILQKLNCDELQGFYFSRPKP 682 >UniRef50_A5ERD3 Diguanylate cyclase/phosphodiesterase n=12 Tax=Bradyrhizobiaceae RepID=A5ERD3_BRASB Length = 902 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 70/281 (24%), Positives = 118/281 (41%), Gaps = 18/281 (6%) Query: 120 TYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPI 179 + FR + T++E D + +EL + ++ F P Sbjct: 604 LLANAGAALFRAKARSRGSITFYEPEM-DQQIRDRRVLHQELSVAIKNGELS--LYFQPQ 660 Query: 180 VDPLSRR------IIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTM 228 S R II FEA+ + + PS + G I A Sbjct: 661 --ASSGRTVDCSEIIGFEALARWHHPVRGFVPPSDFIPLAEESGMIVEMGEWILREACRE 718 Query: 229 AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEF 288 A + +++NL P V+ D V+ + + + L P ++ +E TE +I FD Sbjct: 719 AASWPKP-LQVAVNLSPAQFVH-GDLVALVHSILLETGLSPGRLELEITEGVLIEDFDRG 776 Query: 289 AEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAI 348 ++ LKA G+ V++D FG+G++ L L F D+IKI + + N+ ++ AII+A+ Sbjct: 777 VALLRRLKALGVRVSMDDFGSGYSSLSYLQAFPFDKIKIDRAFVMNLGRNPQSAAIIRAV 836 Query: 349 IKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 I + + + A GV TPE+ +L G + QG L K Sbjct: 837 IGLGHGMNMSIVAEGVETPEQLGFLAEQGCDSVQGYLLGKP 877 >UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q5P4W8_AZOSE Length = 1039 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 63/327 (19%), Positives = 113/327 (34%), Gaps = 28/327 (8%) Query: 74 IVELLCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFV 133 +V +L + R R H V VF Q + + ++ Sbjct: 704 LVAVLREPFALR----------GARHHISGSVGITVFPDDGDDVQTLLRNADIAMYKAKQ 753 Query: 134 LATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTIND---HFAFHPIVDPLSRRIIAF 190 + + AD + L + + PIVD S ++ Sbjct: 754 AGKNR------AQPYAPHMQADALARVHLEADLRMAVEQRAFELHYQPIVDCASGALVGA 807 Query: 191 EAIVQKNED-----SPSAIAVGQRKDGEIYTAD---LKSKALAFTMAHALELGDKMISIN 242 EA+++ SP + G I L+ A +++N Sbjct: 808 EALIRWKHPERGMISPLEFIPVAEECGLIVPIGEWVLREVVRQRRDWLARGHPPLRLTLN 867 Query: 243 LLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISV 302 + + E + + ++ E TES ++ + + +K GI Sbjct: 868 VSGVQF-REAGLPELVRTLLAEFGTARSSLVFEITESVLMGGSENVEARMCDIKEQGICF 926 Query: 303 AIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAM 362 A+D FG GF+ L L RF D +KI + + + +++AII SL ++V+A Sbjct: 927 ALDDFGTGFSSLSYLKRFPVDIVKIDRSFVRDCPDDRNDATLVEAIINMAHSLGLRVTAE 986 Query: 363 GVATPEEWMWLESAGIEMFQGDLFAKA 389 GV + E+ +L + G + QG L K Sbjct: 987 GVESAEQREFLRALGCDYLQGYLIGKP 1013 >UniRef50_A6SW06 Sensory box protein n=2 Tax=Betaproteobacteria RepID=A6SW06_JANMA Length = 459 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 54/256 (21%), Positives = 111/256 (43%), Gaps = 14/256 (5%) Query: 150 WLFIADGSDKELDSCALSPTINDH---FAFHPIVDPLSRRIIAFEAIVQKNED-----SP 201 W+ AD S++ + L + D+ + P RI+ EA+++ SP Sbjct: 176 WVMQADLSERNVMEADLRKALQDNQLMLYYQPQT-GNDGRIVGAEALLRWRHPVKGMVSP 234 Query: 202 SAIAVGQRKDGEIYTADLKSKALAFTM----AHALELGDKMISINLLPMTLVNEPDAVSF 257 + + G I +A + ++IN+ + +PD VS Sbjct: 235 ADFIPLAEQTGLILPIGHWVLGMACAQLISWSKHPATAQLSLAINVSALQF-KQPDFVSQ 293 Query: 258 LLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLL 317 +++ + + P + +E TES +++ ++ + +LK G+ +++D FG G++ L L Sbjct: 294 VVSVLDRSGADPHLLELELTESMLVNDVNDIIAKMNALKEKGLRLSLDDFGTGYSSLSYL 353 Query: 318 SRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAG 377 + D++KI Q + ++ I++ +++ + + V A GV T E+ +L G Sbjct: 354 KKLPLDQLKIDQSFVRDMLFDSNDVTIVRTVVELARGMGLHVIAEGVETQEQRQFLAELG 413 Query: 378 IEMFQGDLFAKAKLNG 393 FQG L ++ N Sbjct: 414 CLSFQGYLLSRPVPNA 429 >UniRef50_B0CCG3 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains), putative n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0CCG3_ACAM1 Length = 581 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 71/296 (23%), Positives = 121/296 (40%), Gaps = 15/296 (5%) Query: 116 KFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFA 175 + + D L F+ + + + +L +N Sbjct: 285 RAEDLLRDANTAVSYAKGLGRANYVVFDPTMHARAVRLLQL-ENDLKRALREQELN--LF 341 Query: 176 FHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLK---SKALAFT 227 F PIV +RII FEA+V+ SP + G I+ D Sbjct: 342 FQPIVCLADQRIIGFEALVRWMHPRLGMVSPLEFIPIAEETGLIFEIDQWMLKEACFRIQ 401 Query: 228 MAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDE 287 IS+N ++PD VS + + + P+Q+++E TES + SR Sbjct: 402 QWRRFTEEPLSISVNFSAKQF-DQPDLVSQVRQVLLETRISPQQLMIEITESVLFSRDQA 460 Query: 288 FAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQA 347 + + LK G+S+ ID FG G+A L L + D +KI + I + ++++ Sbjct: 461 AIDTLHQLKNMGVSLCIDDFGTGYASLQYLQQLPVDTLKIDRSFIKRMDVDNLD--LVRS 518 Query: 348 IIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEKK 403 II+ L + V+A GV TP + +L G + QG LF+K ++G ++A ++K Sbjct: 519 IIELAHDLGLSVTAEGVETPVQRRFLLDMGCQEAQGHLFSKP-VDGQMAVALLQEK 573 >UniRef50_Q2RTE0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RTE0_RHORT Length = 886 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 60/280 (21%), Positives = 115/280 (41%), Gaps = 11/280 (3%) Query: 120 TYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPI 179 + + +R + +F ++ + +++L S + Sbjct: 583 LMKNADMAMYRAVKSGDDSCCFFSNEM-NAEAAVRLSLEEDLRRALDSGD-QLFLHYQLQ 640 Query: 180 VDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTAD---LKSKALAFTMAHA 231 S R + EA+ + + P+ G I L + + A Sbjct: 641 FCIESGRPVGAEALARWTHPTLGAIPPTRFIPVAEDSGLILALGDWVLGTALAEYARWRA 700 Query: 232 LELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEA 291 G I++N+ + + V + + + + + PE + +E TES ++ D+ Sbjct: 701 AGCGRLTIAVNMSAVQF-RQKGLVERVTDLLAQHGVPPEDLELELTESMLMQDADQAVAQ 759 Query: 292 IKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKC 351 + +L AGI ++ID FG G++ L L F+ D++K+ Q + +V + G I +AII Sbjct: 760 LTALSQAGIRLSIDDFGTGYSSLGYLKLFRVDKLKVDQSFVRDVTEDGNDAVIARAIINL 819 Query: 352 CTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 SL ++V A GV TPE+ +L G ++ QG L A + Sbjct: 820 GHSLGLEVIAEGVETPEQMAYLRREGCDVVQGYLMAYPEP 859 >UniRef50_B1J7P7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Gammaproteobacteria RepID=B1J7P7_PSEPW Length = 699 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 63/275 (22%), Positives = 125/275 (45%), Gaps = 10/275 (3%) Query: 124 RALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPIVDPL 183 + + + F + D + +L + + H + PIVD Sbjct: 419 ADMALYEAKRNGRNRYECFHVEL-DVAARQRRLVETDLRTALHLGQL--HLHYQPIVDQQ 475 Query: 184 SRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTMAHALELGDKM 238 + + +EA+++ + P + G I+ ++ LA A + + ++ Sbjct: 476 TSSVTGYEALLRWEHPTRGMVMPMDFIPIAEETGLIHELGTRALNLACQEAASWD-SEQT 534 Query: 239 ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAA 298 +S+NL P+ N + V + + + L P+++ +E TES ++ +E +++LK Sbjct: 535 VSVNLSPVQFKN-ANLVHTVALALADSGLAPQRLELEITESVLLGNSEENVRTLRALKDL 593 Query: 299 GISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQ 358 G+S+++D FG G++ L L F DRIKI + + ++ S +I++AI + SL I+ Sbjct: 594 GVSISLDDFGTGYSSLGYLRSFPFDRIKIDKSFVHDMCDSREAMSIVRAITELSNSLMIK 653 Query: 359 VSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNG 393 +A GV + E+ L + G FQG L+ + G Sbjct: 654 TTAEGVESEEQMQRLAAEGCSHFQGYLYGRPVPAG 688 >UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z192_9NEIS Length = 943 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 69/310 (22%), Positives = 120/310 (38%), Gaps = 16/310 (5%) Query: 92 MELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWL 151 +ELF+ + + +VF F+ + + ++ Sbjct: 618 VELFNHSISITPSIGISVFPDDGRDFETLVRNADAAMYHAKSAGRNSYKFYTADLNARAR 677 Query: 152 FIADGSDKELDSCALSPTINDHFA--FHPIVDPLSRRIIAFEAIVQKNEDS-----PSAI 204 I E++S D F + P VD + II EA+++ P Sbjct: 678 EIL-----EIESQLRYALDRDEFVLHYQPQVDLKTGEIIGAEALIRWQHPELGLLGPVRF 732 Query: 205 AVGQRKDGEIYTAD---LKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNE 261 + G I ++ L +++NL + + D L Sbjct: 733 IEVAEERGFIVQIGNWVIQEACRQLAQWRRQGLPRISLAVNLSTLQF-RQQDLAVHLQRA 791 Query: 262 IKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQ 321 + A+ LV + VE TES ++ + I +K+ G+ ++ID FG G++ L L RF+ Sbjct: 792 LSAHGLVGSDLDVEVTESVIMDDVETTIHTIDRIKSMGLQLSIDDFGTGYSSLSYLKRFK 851 Query: 322 PDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMF 381 D++KI + + ++ AI +AII +L + V A GV T E+W +L+ G Sbjct: 852 ADKLKIDRSFVRDIPMDADDSAIARAIINMAKNLNMTVIAEGVETIEQWKFLDREGCHAA 911 Query: 382 QGDLFAKAKL 391 QG L AK Sbjct: 912 QGYLLAKPVP 921 >UniRef50_C7RAA4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RAA4_KANKD Length = 1128 Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats. Identities = 64/276 (23%), Positives = 111/276 (40%), Gaps = 16/276 (5%) Query: 124 RALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTIND--HFAFHPIVD 181 +R +F ++ L +L ND H + P + Sbjct: 838 AETAMYRAKHDGRNTFRFFAQEMQEHSLRSL-----QLSIALKEALTNDQFHLVYQPQMS 892 Query: 182 PLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSK---ALAFTMAHALE 233 + ++ EA+++ SP+ + G I A Sbjct: 893 LSNNSMVGAEALLRWEHPEWGTVSPAEFIPLAEQSGLIVQIGEWVIQQVAQQQKSWLERG 952 Query: 234 LGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIK 293 L + +I++NL + ++PD V + + ++ +VPE I VE TE+ + + I Sbjct: 953 LPEVIIAVNLSALQF-HQPDLVETITSLVRKAGVVPENIEVELTEAVALKDPEVAGTTID 1011 Query: 294 SLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCT 353 +L AG V+ID FG G++ + L +F ++KI Q I ++ QAI+ AII+ Sbjct: 1012 ALSRAGFKVSIDDFGTGYSSMSYLKKFAVHKLKIDQSFIKDIVTDIDDQAIVTAIIQMAH 1071 Query: 354 SLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 SL A GV T E+ +L G E QG +++ Sbjct: 1072 SLHKTTIAEGVETQEQLDFLRKKGCEEMQGYWYSRP 1107 >UniRef50_Q139W0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodopseudomonas palustris BisB5 RepID=Q139W0_RHOPS Length = 801 Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats. Identities = 69/324 (21%), Positives = 127/324 (39%), Gaps = 26/324 (8%) Query: 92 MELFDLRLHERDDVLQ-------AVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEI 144 + FDL + ++ A++ S + + +R +FE Sbjct: 476 VRAFDLDFQLKGGAVKGGCSIGVAIYPDNGSSAEELIANADAALYRVKADQRGSFRFFET 535 Query: 145 PAEDSWLFIADGSDKELDSCALSPTINDHFA--FHPIVDPLSRRIIAFEAIVQKNEDS-- 200 + S + L + + F F P V S ++ FE + + + Sbjct: 536 TLDASLR-----EKRMLHKELIEAVEAEQFEPFFQPQV-TASGEVVGFEVLGRWRHPNRG 589 Query: 201 ---PSAIAVGQRKDGEIYTADLKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSF 257 P+ + G I D + A A + + I++NL P+ D S Sbjct: 590 LVMPARFIALAEETGLISGIDEQILRAACREAASWDRP-LSIAVNLSPIDF-RRGDVASM 647 Query: 258 LLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLL 317 +L+ + L P ++ VE TE ++ ++ ++ G +A+D FG+G++ L L Sbjct: 648 ILSILFETGLSPGRLNVEITEGVLMQDDGRAMSQLRRIRDLGAHLAMDDFGSGYSSLSYL 707 Query: 318 SRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAG 377 F D+IKI + + + +AI++AII SL + V A GV T ++ L + G Sbjct: 708 QAFPFDKIKIDGTFVAQLGSNPQSRAIVRAIIGLGHSLGLSVIAEGVETNAQFELLVALG 767 Query: 378 IEMFQGDLFAKAKLNGIPSIAWPE 401 + FQG L P+ A+ + Sbjct: 768 CDEFQGYLIGHPA----PAAAYRD 787 >UniRef50_C5SMP6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(S) n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SMP6_9CAUL Length = 929 Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats. Identities = 68/290 (23%), Positives = 118/290 (40%), Gaps = 18/290 (6%) Query: 120 TYDDRALQFFRTF----VLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF- 174 ++ L +R + E Y+E +++ + L D Sbjct: 641 LMNNADLALYRAKAQPRINGHEAVCYYEARMDEAAR-----DRRALAKDLWQAIARDELR 695 Query: 175 -AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTM 228 + S+ I +EA+++ SP+ + G I A Sbjct: 696 VHYQVQRSVTSQAITGYEALLRWQHPQRGFVSPADFIPVAEECGAILEIGEWVLRTACAE 755 Query: 229 AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEF 288 A G +++NL P+ L + PD V + + + L P ++ +E TES +I Sbjct: 756 AATWTNG-AKVAVNLSPVQLTH-PDLVGMVQSILIETGLSPRRLELEITESTIIGDKARA 813 Query: 289 AEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAI 348 ++ +K G+++AID FG G++ L L+ F D+IKI + + +S +AII+AI Sbjct: 814 LHILRQIKGFGVTIAIDDFGTGYSSLDTLNAFPFDKIKIDRSFLMEAEQSPQARAIIRAI 873 Query: 349 IKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIA 398 + SLE+ V A GV T + L S G + QG F + + A Sbjct: 874 LALGRSLEVPVLAEGVETVAQLELLRSEGCDEAQGYYFGRPAAQVLDETA 923 >UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YY70_9NEIS Length = 1054 Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats. Identities = 62/292 (21%), Positives = 118/292 (40%), Gaps = 15/292 (5%) Query: 108 AVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALS 167 ++F S+ Q L + + +F L L++ Sbjct: 752 SLFPDNGSELQELLVSADLAMYHAKAQGRNRYQFFTPE-----LNAQVAERLTLENHLRQ 806 Query: 168 PTINDHF--AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLK 220 + P +RR++ EA+++ SP+ + G I Sbjct: 807 ALERQQLYLVYQPQFAIDNRRLVGCEALLRWQHPEQGLISPARFIPLAEETGLIVEIGRW 866 Query: 221 SKALAFTMAHALELGD--KMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTE 278 A A A +++N+ L +PD ++ + + + L + +E TE Sbjct: 867 VLDEACRQAAAWLAAGTPLRVAVNVSARQL-GQPDLLAEVEAALARHRLPSCWLELEVTE 925 Query: 279 SEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKS 338 S ++ ++ +++ K GI +A+D FG G++ L L RF PD IKI + + N+ + Sbjct: 926 STLMEDAEQAVRHLQAFKERGIHLAVDDFGTGYSSLTYLKRFSPDLIKIDRAFVMNLPDN 985 Query: 339 GPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 AI+ AI++ +L +Q A GV + E+ +L AG ++ QG L + + Sbjct: 986 RDDAAIVSAIVQLAEALGMQTLAEGVESEEQLDFLAQAGCDVVQGYLTGRPQ 1037 >UniRef50_A0L8C6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=A0L8C6_MAGSM Length = 720 Score = 288 bits (739), Expect = 2e-76, Method: Composition-based stats. Identities = 65/301 (21%), Positives = 113/301 (37%), Gaps = 24/301 (7%) Query: 118 QLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFA-- 175 + + + ++ S L A + L+S + F Sbjct: 421 SVLMRNAESAMYHAKQSGRNNFQFY-----RSELNTASLARILLESGLRNAVDRQEFLLF 475 Query: 176 FHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTMAH 230 + P ++ + ++I EA+++ SP + G + AL Sbjct: 476 YQPQMELATGKLIGMEALIRWQHPEQGMVSPGEFIPLAEETGLVIPMGQ--WALKEACRQ 533 Query: 231 ALELGD-----KMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 + D IS+NL + PD ++ + + L P + +E TES + Sbjct: 534 SKVWMDQTGVPLRISVNLSGIQF-RLPDFTEMVMRTVGESGLPPHCLELELTESIAMGDV 592 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 +E E + L G+ +AID FG GF+ L L +F D +KI Q + N + AII Sbjct: 593 EETLEKLTILSRFGVLLAIDDFGTGFSSLSYLKKFPIDTLKIDQSFVRNCTRDPEDAAII 652 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA----KLNGIPSIAWPE 401 +A I SL ++V A GV E+ +L + QG + + K A+ + Sbjct: 653 RAFINLAHSLNLEVIAEGVEHLEQLEFLAQESCDEIQGYFYGRPLSGDKFEMFMLDAFAK 712 Query: 402 K 402 K Sbjct: 713 K 713 >UniRef50_Q0F127 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F127_9PROT Length = 529 Score = 288 bits (739), Expect = 2e-76, Method: Composition-based stats. Identities = 55/282 (19%), Positives = 109/282 (38%), Gaps = 12/282 (4%) Query: 116 KFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFA 175 + + +F+ + S + + + E+ H Sbjct: 235 DSEALLQSAEQSMYSVKADGGNNYQFFKASTQSSAINRLN-MESEMRKAIERGEFVLH-- 291 Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDSPSAIAV-----GQRKDGEIYTADLK---SKALAFT 227 + P ++ S ++ EA+++ I + G I Sbjct: 292 YQPQINATSGHVVGMEALIRWQHPERGMIPPYHFISVAEETGMIVPIGEWVMYEACRQNK 351 Query: 228 MAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDE 287 H L + +++NL + + + + +K + L P + +E TES ++ + Sbjct: 352 AWHDAGLAELKVAVNLSARQFSDRK-LLDKVRHALKQSGLNPAFLELEITESVIMKDIEA 410 Query: 288 FAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQA 347 ++ + + G+S+AID FG G++ L L RF D++KI + I +V S I++A Sbjct: 411 TIALLEEIASMGLSLAIDDFGTGYSSLNYLKRFPIDKLKIDKSFIDDVISSEDDGKIVEA 470 Query: 348 IIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 II +L++ V GV E++ WL+ QG F+K Sbjct: 471 IIGLSHNLKLNVICEGVEDAEQFAWLQERQCNEIQGYYFSKP 512 >UniRef50_Q21WZ6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Betaproteobacteria RepID=Q21WZ6_RHOFD Length = 1355 Score = 288 bits (739), Expect = 2e-76, Method: Composition-based stats. Identities = 57/290 (19%), Positives = 114/290 (39%), Gaps = 21/290 (7%) Query: 117 FQLTYDDRAL-QFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKE------LDSCALSPT 169 + F+ +A ++ ++ D++ F +D ++ L Sbjct: 777 ASFPDNGADFDTLFKAVEIAMHRA---QLKGRDTYQFYSDDMYEQVLAHDRLIKALRQAI 833 Query: 170 INDHF--AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIY---TADL 219 + D + P VD + +I EA+++ SP + G I L Sbjct: 834 VLDQLQLVYQPQVDLQTGQICGVEALLRWQHPELGAVSPGQFIPLAEESGLIIGIGEWVL 893 Query: 220 KSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTES 279 + + ++IN P+ + + V + + + + P I +E TES Sbjct: 894 RRACQDIRRWLDHGIKVPHVAINASPLQF-RDNNLVLQVKAALTESQIDPALIYIEVTES 952 Query: 280 EVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSG 339 ++ +K+LK GI +++D FG G++ L L RF D++KI Q + ++ S Sbjct: 953 ALMDDVPRNEAMLKALKDLGIKLSLDDFGTGYSSLSYLKRFPFDQVKIDQSFVRDIATSQ 1012 Query: 340 PRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 +++ I+ L ++V A GV T + + ++ + QG F K Sbjct: 1013 SDSLLVKVIVSMAHGLGMKVIAEGVETEAQCEIMRTSICDEIQGYFFCKP 1062 >UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8G8_9NEIS Length = 887 Score = 288 bits (739), Expect = 2e-76, Method: Composition-based stats. Identities = 57/286 (19%), Positives = 117/286 (40%), Gaps = 21/286 (7%) Query: 116 KFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDK-ELDSCALSPTINDHF 174 + + + + + +++ +++ + F Sbjct: 590 SASELIRNADAAMYLAKAQGSNAYRF------YTESLTRAANERLSMETSLRRALRCEEF 643 Query: 175 A--FHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFT 227 + P+V+ S R++ E +V+ PS + G I L L Sbjct: 644 VLHYQPLVELASGRVLGAEVLVRWQPPGEALVPPSRFIPLAEETGLIVP--LGDWVLHEA 701 Query: 228 MAHALELGD----KMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVIS 283 D ++++NL P + D V + ++ + L P Q+ +E TE ++ Sbjct: 702 CRQGKAWLDAGLPLLLAVNLSPRQFLRH-DLVGQVRKALQGSGLPPAQLELELTEGALME 760 Query: 284 RFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQA 343 + ++ + + +LK G+S+AID FG G++ L L RF D++KI + + ++ + Sbjct: 761 QAEQAVKTLHALKRLGVSLAIDDFGTGYSSLAYLKRFPLDKLKIDRSFVRDLPRDSSDAE 820 Query: 344 IIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 I+ II +L+++ A GV TP++ +L G + QG LF+ Sbjct: 821 IVTTIIAMVRNLKLEALAEGVETPQQLAFLRQLGCDSGQGYLFSPP 866 >UniRef50_B9JAE4 GGDEF family protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JAE4_AGRRK Length = 738 Score = 288 bits (739), Expect = 2e-76, Method: Composition-based stats. Identities = 71/287 (24%), Positives = 124/287 (43%), Gaps = 11/287 (3%) Query: 112 KGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTIN 171 +G + L ++ + +E D+ + + +L + + Sbjct: 436 EGRIDREELVRRADLAMYKAKEAGRARMICYETAM-DTDREERNALELDLRNAIDRQELT 494 Query: 172 DHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAF 226 A+ P+VD +S I EA+V+ N SP A G I L L Sbjct: 495 --VAYQPLVDAVSHDITGVEALVRWNRPGYGPVSPDAFIPIAETSGLIEALGLL--VLRK 550 Query: 227 TMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFD 286 A A + D I++N+ P N P ++ + +K + E++ +E TE +I + Sbjct: 551 ACAAARQWPDLRIAVNVSPGQFRN-PAFADYVRHVLKDAEIEAERVTLEITEGYMIQNPE 609 Query: 287 EFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQ 346 ++I+ LK G+ VA+D FG+GF+ + L +F DRIKI + L +V + ++Q Sbjct: 610 RTRQSIERLKKLGVKVALDDFGSGFSSIGYLRQFGFDRIKIDRSLTMDVLTDSRSRDMLQ 669 Query: 347 AIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNG 393 A + SL++ V+A G+ T E+ L+ G + QG F K Sbjct: 670 ATVALARSLDLPVTAEGIETEEQGTALKLFGCDELQGYFFGKPMPEA 716 >UniRef50_A4G3M6 Putative two-component response regulator n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G3M6_HERAR Length = 818 Score = 288 bits (739), Expect = 2e-76, Method: Composition-based stats. Identities = 64/284 (22%), Positives = 106/284 (37%), Gaps = 16/284 (5%) Query: 116 KFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF- 174 + + +R ++ + G L+S ND Sbjct: 524 DSESLLANADTAMYRAKSSGRNNFQFYT-----KEMNATSGERLSLESDLWHALKNDELF 578 Query: 175 -AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFT- 227 + P +D +I EA+++ +P +G I + A Sbjct: 579 LVYQPQIDLRDGTVIGMEALIRWQHPKRGLIAPMDFIPMAECNGLIIPIGIWVLETACRH 638 Query: 228 --MAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 L ++INL L ++ + V + + I+A L P + +E TES V+ Sbjct: 639 NLQLQKEGLPPIRVAINLSARQL-SDRNFVESVQSVIEAIGLDPHYLELEVTESMVMHNV 697 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 ++ + L GI +++D FG GF+ L L RF DR+KI Q I N I Sbjct: 698 EDVVVTLNDLNKMGIQLSLDDFGTGFSSLAYLKRFPIDRLKIDQSFIFNCDSDPGDAIIA 757 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 Q II L+I+V A GV E +L+ G + QG ++ Sbjct: 758 QTIIALAHGLKIKVIAEGVEKSEHLSFLKKNGCDEGQGYFISRP 801 >UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2A0_9PROT Length = 644 Score = 288 bits (739), Expect = 2e-76, Method: Composition-based stats. Identities = 60/281 (21%), Positives = 105/281 (37%), Gaps = 13/281 (4%) Query: 120 TYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPI 179 + ++ +F + F ++ L + P Sbjct: 352 LVKNADTAMYQAKDSGRNAYKFFTPAMGE-EAFKRMEMERALRYAI--EKNQFKLLYQPQ 408 Query: 180 VDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLK---SKALAFTMAHA 231 V+ S RI+ EA+++ SPS I A Sbjct: 409 VELSSGRILGVEALLRWTHPEWGPISPSVFISLIENTNLILPIGEWVLDEACKQNKAWQA 468 Query: 232 LELG-DKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAE 290 L G +++N + D V + ++ + L E + +E TE ++ + Sbjct: 469 LHPGFPLRMAVNFAARQFA-QADLVETVAKALQKSGLAAEFLELEITEGSAMNDIELNIR 527 Query: 291 AIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIK 350 +++LK G+S+AID FG GF+ L L RF D +KI + + + AI+ I + Sbjct: 528 KMQALKELGVSIAIDDFGTGFSSLAYLKRFPIDILKIDKSFLDEIQHGKKDAAIVATISE 587 Query: 351 CCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 SL ++V A GV T + +L G +M QG LF++ Sbjct: 588 MAHSLGMEVIAEGVETKYQLEFLRGHGCDMIQGYLFSRPVP 628 >UniRef50_A0P1H8 Putative uncharacterized protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P1H8_9RHOB Length = 944 Score = 288 bits (739), Expect = 2e-76, Method: Composition-based stats. Identities = 67/289 (23%), Positives = 118/289 (40%), Gaps = 17/289 (5%) Query: 111 DKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTI 170 GT+ +L + L +R +FE A +EL + + Sbjct: 645 ADGTAGDEL-FKQADLALYRAKEDGRNTYRFFETDMG-----TAVNDRRELITDLRTAVA 698 Query: 171 NDHFA--FHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKA 223 N F P RI FEA+V+ N SP+ G I + L Sbjct: 699 NGELELYFQPQYTLADDRISGFEALVRWNHPKRGMVSPADFIPLAEDTGLI--SQLGEWV 756 Query: 224 LAFTMAHALELGDK-MISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVI 282 L A + D +++NL P L L++ + L +++ +E TES ++ Sbjct: 757 LMEACRIAAKWPDHLRVAVNLSPRQLRGHA-FGPVLIDALVQTGLKADRLELEVTESVLL 815 Query: 283 SRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQ 342 + ++ +++ K+ G+ V++D FG G++ L L RF D+IKI Q + ++ S Sbjct: 816 TDSEDVLDSLHQAKSLGVKVSMDDFGTGYSSLSYLRRFPFDKIKIDQSFVRSMAYSDDSI 875 Query: 343 AIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 +I++A+I+ +L + +A GV T + L G QG + Sbjct: 876 SIVKAVIELANNLNMTTTAEGVETRQLLDMLTEIGCTEAQGYYLGRPMP 924 >UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=B9M1S6_GEOSF Length = 749 Score = 288 bits (739), Expect = 2e-76, Method: Composition-based stats. Identities = 62/279 (22%), Positives = 112/279 (40%), Gaps = 12/279 (4%) Query: 124 RALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPIVDPL 183 + + + +F P + + L F PIV+ Sbjct: 444 ADMAMYAAK-EGGGKGYHFYSPEMNLKAHARMEMETNLRHALERE--EFFLEFQPIVNAR 500 Query: 184 SRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTAD---LKSKALAFTMAHALELG 235 R++ EA+++ ++ P + G I L++ L Sbjct: 501 DGRLVGAEALLRWSDPEKGLIMPDMFIQVAEESGFIVPLGEWVLRTACRKMKDWREAGLP 560 Query: 236 DKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSL 295 IS+N+ + + + + I+ + P + +E TE+ ++ + A+A+ L Sbjct: 561 PFRISVNVSGRQFC-QANFTDTVCSIIRETGMDPSFLALEMTETSLMVDVEATAKALMQL 619 Query: 296 KAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSL 355 K IS+ ID FGAG++ L L +F DRIKI + I ++ +AI++AII L Sbjct: 620 KELDISIVIDDFGAGYSSLGYLQKFPIDRIKIDRSFIRDLSSHANDKAIVEAIIAMAARL 679 Query: 356 EIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGI 394 ++QV A GV T E+ +L+ G QG F + + Sbjct: 680 KLQVVAEGVETSEQLDFLKEQGCHEIQGFYFHRPLSEEL 718 >UniRef50_A8TVS6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=alpha proteobacterium BAL199 RepID=A8TVS6_9PROT Length = 829 Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats. Identities = 66/279 (23%), Positives = 108/279 (38%), Gaps = 14/279 (5%) Query: 121 YDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPIV 180 D L +R L +S F+ + + D + +L + F PIV Sbjct: 539 LRDSELAMYRAKELGKARSVAFDPAMRGTTVTPLD-VETDLRRALDRNEM--ILNFQPIV 595 Query: 181 DPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTMAHAL--- 232 RI FEA+ + PS + G I A Sbjct: 596 SLADGRIRGFEALSRWRHKERGDIPPSEFIPIAEETGMIVELGQWVLRNACAQMVEWNKE 655 Query: 233 --ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAE 290 + G IS+NL + D V + N + L + +E TES ++ A+ Sbjct: 656 FPDQGPFEISVNLSGRQFT-QLDLVKMVTNSLDGTGLDASFLKLEITESALMENAQRSAQ 714 Query: 291 AIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIK 350 ++ LK I V +D FG G++ L L +F D +KI + + ++ ++ I++ I Sbjct: 715 MLRHLKDLHIKVCVDDFGTGYSSLSYLHKFPIDTLKIDKSFVQDMGRNRHNLEIVRTIAV 774 Query: 351 CCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 +L + V A GV TPE+ L + G QG LF++ Sbjct: 775 LAQNLRLDVIAEGVETPEQLAQLRAIGCGYAQGFLFSRP 813 >UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=3 Tax=Polaromonas RepID=Q12GF0_POLSJ Length = 989 Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats. Identities = 70/308 (22%), Positives = 116/308 (37%), Gaps = 20/308 (6%) Query: 94 LFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFI 153 L + + + F+ L ++ + +F+ + Sbjct: 675 LAGYQHYSTSSIGVTPFNARQGSVSELLKQADLAMYQAKTMGRNTVCFFDPDMQ------ 728 Query: 154 ADGSDKELDSCALSPTINDH---FAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIA 205 A S S L + +H + P VD +RI EA+++ SP+ Sbjct: 729 ASVSANAALSTDLRAGLREHQFLVHYQPQVD-REQRITGVEALLRWKHPQRGMVSPAEFI 787 Query: 206 VGQRKDGEIYTADLKS---KALAFTMAHAL-ELGDKMISINLLPMTLVNEPDAVSFLLNE 261 + G I L + E I++N+ PD V ++ Sbjct: 788 PVAEETGLILPLGQWVLEQACLQLAVWQKRPETAGLSIAVNVSVRQF-RHPDFVDMVMAA 846 Query: 262 IKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQ 321 IK + P + +E TES + R + + +LKA G+++A+D FG G++ L L R Sbjct: 847 IKHTGIQPHNLKLELTESLLADRMEIAIAKMGTLKALGVTLALDDFGMGYSSLSYLKRLP 906 Query: 322 PDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMF 381 D++KI + I +V AI AII SL + V A GV T + +L G + Sbjct: 907 LDQLKIDKSFIADVFSDPNDAAICSAIISLAQSLGLDVIAEGVETEAQRSFLAGLGCGYY 966 Query: 382 QGDLFAKA 389 QG LF Sbjct: 967 QGFLFCPP 974 >UniRef50_Q2J2T1 Diguanylate cyclase/phosphodiesterase n=6 Tax=Rhodopseudomonas palustris RepID=Q2J2T1_RHOP2 Length = 579 Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats. Identities = 60/276 (21%), Positives = 110/276 (39%), Gaps = 14/276 (5%) Query: 121 YDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFA--FHP 178 + L R FE +++ + + L++ FA + P Sbjct: 283 MKNADLALNRARQDRATGYCVFESGMDET-----VKARRALETDLRRALALREFALVYQP 337 Query: 179 IVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTMAHALE 233 D +RR+ FEA+++ N SP + G I A A Sbjct: 338 QFDLQTRRVTGFEALLRWNSPTRGTVSPLDFIPLAEETGIINPIGEWVLRTACRDAANWP 397 Query: 234 LGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIK 293 D +++N+ + + + +L+ + + L P ++ +E TES ++ ++ Sbjct: 398 -ADITVAVNISAVQFAHRT-LATTVLSALSDSDLDPRRLELEITESVMLDARGTALGVLQ 455 Query: 294 SLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCT 353 L+ GI V++D FG G++ L L F D+IKI Q + + +AI++AI Sbjct: 456 RLRGTGIRVSLDDFGTGYSSLGYLRSFPFDKIKIDQSFVRGTAEDPGNRAIVRAIASLGQ 515 Query: 354 SLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 +L + A GV T E + + G QG L ++ Sbjct: 516 NLGMATVAEGVETAEHLERVAADGCTHVQGYLISRP 551 >UniRef50_A3UFJ0 Putative uncharacterized protein n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UFJ0_9RHOB Length = 686 Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats. Identities = 74/318 (23%), Positives = 130/318 (40%), Gaps = 18/318 (5%) Query: 92 MELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWL 151 + D + + AV+ + + + L ++ + ++E L Sbjct: 358 VRHADFEIVTNASLGVAVYPEDGRDCETLMRNADLAMYKAKTDPLNRIQHYE-----HAL 412 Query: 152 FIADGSDKELDSCALSPTINDH--FAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAI 204 A +EL + + P +D S + +EA+V+ SP+ Sbjct: 413 GEAVRQRRELAQDLRTALETGELRMFYQPQIDLKSGEVCGYEALVRWPHPVRGMISPAEF 472 Query: 205 AVGQRKDGEIYTADLKSKALAFTMAHALELGDK-MISINLLPMTLVNEPDAVSFLLNEIK 263 +G I L L T + ++INL + L N+P V +L + Sbjct: 473 VPLAEANGLIGR--LGDWVLETTCEEVAQWPGAPKVAINLSAIQL-NDPHLVGKVLQAMV 529 Query: 264 ANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPD 323 + L P Q+ +E TE+ +I + ++ +KA G+S+A+D FG G++ L L RF D Sbjct: 530 STGLSPSQLEIELTETALIHDLGQSLNVLRRIKALGVSMALDDFGTGYSALETLRRFPFD 589 Query: 324 RIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQG 383 +IK+ + + G +A+I A++ +L+I V A GV T ++ L G E QG Sbjct: 590 KIKLDKGFTDGLSDGGRSRAVISAVVTLAHNLDIPVLAEGVETADQLDLLNMMGCEQAQG 649 Query: 384 DLFAKAKL--NGIPSIAW 399 L + NG P A Sbjct: 650 YLIGRPAPSVNGQPPAAL 667 >UniRef50_Q1JWP9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JWP9_DESAC Length = 956 Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats. Identities = 58/225 (25%), Positives = 102/225 (45%), Gaps = 9/225 (4%) Query: 173 HFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFT 227 H + P D + ++ EA+++ N SP + G I+ A Sbjct: 716 HLHYQPQFDLKNAGLVGVEALIRWNHPTEGPVSPGEFIPLAEETGLIHPLGRWVLREACR 775 Query: 228 MAHALELGDKMI---SINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISR 284 A + I ++N+ + L + + V L + + P+ I +E TES V+ R Sbjct: 776 QAKFWQNNFARIVPVAVNVSSLQL-KKNNFVHVLEECLNEFQIDPQLIELEITESAVMDR 834 Query: 285 FDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAI 344 ++ E + ++K G ++AID FG G++ L L +F ++KI + + ++ AI Sbjct: 835 LEKSMELLNAIKGLGFNLAIDDFGTGYSSLSYLKKFPFSKLKIDRSFVMDLETDENDAAI 894 Query: 345 IQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 I AII TSL ++ A GV T E+ +L G + QG L ++ Sbjct: 895 ITAIISMATSLGLKTIAEGVETVEQKHFLTDHGCDEVQGFLLSRP 939 >UniRef50_Q2BRN8 Signal transduction protein containing membrane, EAL and GGDEF domains-like n=1 Tax=Neptuniibacter caesariensis RepID=Q2BRN8_9GAMM Length = 690 Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats. Identities = 59/282 (20%), Positives = 105/282 (37%), Gaps = 12/282 (4%) Query: 116 KFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFA 175 + L + ++E D + +L S + Sbjct: 374 DASDLLRNADLAMYYAKKSGRNTFAFYEQHM-DEEAQRTLSIEHDLRSALDGNQL--RLV 430 Query: 176 FHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTMAH 230 + P + + +I A EA+++ + P + G I A A A Sbjct: 431 YQPQISADNGKITAIEALLRWDHPLDGPIPPDEFIPHAEETGLIIPIGRWVMAEACKAAK 490 Query: 231 A---LELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDE 287 A L L + +NL ++P +S + I+ + L P + +E TES ++ Sbjct: 491 AIQDLGLPPIKVCVNLSTRQF-DDPALISHIEEAIETSGLDPRWLELEITESMLMRDMST 549 Query: 288 FAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQA 347 + + S+K GIS+AID FG G++ L L + D +KI + + ++ AI Sbjct: 550 AIDILNSIKQKGISLAIDDFGTGYSSLSYLKKMPVDLLKIDRSFLQDIPSDRDNMAITST 609 Query: 348 IIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 II L + V A GV + +L + QG L ++ Sbjct: 610 IIAMTKQLGLSVVAEGVENQAQMAFLNRNQCTLMQGYLISQP 651 >UniRef50_C4XGC1 Response regulator receiver protein n=2 Tax=Desulfovibrio RepID=C4XGC1_DESMR Length = 725 Score = 288 bits (738), Expect = 3e-76, Method: Composition-based stats. Identities = 62/288 (21%), Positives = 120/288 (41%), Gaps = 19/288 (6%) Query: 118 QLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFA-- 175 + + A+ + F+ + + D L++ + D F Sbjct: 430 EELLQNAAIAMNAARSAGCGRVRVFDWSMRERAERVMD-----LETNLREGLVRDEFVLH 484 Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADL-----KSKALA 225 + PI+D +RR+ EA+V+ P + G I +ALA Sbjct: 485 YQPILDLATRRLRGVEALVRWRRVDGELVPPGEFIPAAEQSGLIIPLGAVVLTEACRALA 544 Query: 226 FTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 A +L +++NL +PD V ++ ++ A+ P + +E TES ++ Sbjct: 545 RWRAGSLGDSPFFMAVNLSARQFT-QPDLVKQVVTALRREAMAPADLKLEITESVLMEHP 603 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 + ++ L+ G+S+ ID FG G++ L L RF D +K+ + ++ + + G + I+ Sbjct: 604 ESAMLKLRGLRELGVSIGIDDFGTGYSSLSYLQRFPIDTLKVDRAFVSGMEEQG-NRVIV 662 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNG 393 ++++ +L V A G+ T + L G +M QG LFA+ Sbjct: 663 RSVVSLAHNLGYDVVAEGIETAAQLDDLSRLGCDMGQGFLFARPMEES 710 >UniRef50_A1SZV0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SZV0_PSYIN Length = 711 Score = 288 bits (738), Expect = 3e-76, Method: Composition-based stats. Identities = 61/282 (21%), Positives = 105/282 (37%), Gaps = 16/282 (5%) Query: 120 TYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFA--FH 177 + + F + + + EL+S N + + Sbjct: 419 LLKNADAAMYYVKRAGKNDYELFV-----NSMNVVAKRRLELESFLRHAIDNKELSVNYQ 473 Query: 178 PIVDPLSRRIIAFEAIVQKNE-----DSPSAIAVGQRKDGEIYTAD---LKSKALAFTMA 229 P +D + RII EA+++ N SP + G I L+ Sbjct: 474 PQIDIPTGRIIGAEALLRWNSAELGMVSPVEFIPIAEETGLISPIGEWVLREACRQVKEW 533 Query: 230 HALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFA 289 L + I++N+ + + + L + +E TE+ ++ + Sbjct: 534 RDDGLPEIQIAVNISVQQFAKQS-LDKLVSKVLLETGLPVHCLELEITENMLMDDVEGAV 592 Query: 290 EAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAII 349 E + LK GI++AID FG G++ L L RF D++KI + IT V A+ QAII Sbjct: 593 ETLHKLKDLGINLAIDDFGTGYSSLSYLKRFPIDKLKIDRSFITYVTTEPSDAAVTQAII 652 Query: 350 KCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 +L + V A GV + +L E QG F++ + Sbjct: 653 SMAHNLGLTVIAEGVEEASQLEFLRQHHCEEMQGYYFSRPLI 694 >UniRef50_B7JYN2 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=10 Tax=Cyanobacteria RepID=B7JYN2_CYAP8 Length = 593 Score = 288 bits (737), Expect = 3e-76, Method: Composition-based stats. Identities = 63/287 (21%), Positives = 115/287 (40%), Gaps = 18/287 (6%) Query: 118 QLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF--A 175 + D + R + F+ L + + L++ N F Sbjct: 304 EEILRDADIAMARAKQKGRGRYEVFDEEMHTQALKLLN-----LETDLRRAIENQEFLVY 358 Query: 176 FHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADL-----KSKALA 225 + PI+ +I+ FEA+++ SP + G I + L Sbjct: 359 YQPIMALEKTKIVGFEALIRWQHPKKGFISPGEFIPIAEETGLIIPIGQIVLKEACQQLK 418 Query: 226 FTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 + + IS+NL L EP+ + + + + L PE + +E TES ++ Sbjct: 419 TWQEKLPKAKNLTISVNLSSQQL-KEPEILQHIDHSLNVTGLQPESLKLEITESLLMENA 477 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 D ++ LK I +++D FG G++ L L RF D +KI + + + K II Sbjct: 478 DVATTLLRQLKERKIQISLDDFGTGYSSLSYLHRFPVDTLKIDRSFVNCIGKPEENLTII 537 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLN 392 Q+I+ +L++ V A G+ T ++ +L+ E QG F+K + Sbjct: 538 QSIMALAHNLDMDVVAEGIETEKQLTFLKFLECEFGQGYFFSKPLPS 584 >UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P713_AZOSE Length = 1043 Score = 288 bits (737), Expect = 3e-76, Method: Composition-based stats. Identities = 55/294 (18%), Positives = 109/294 (37%), Gaps = 13/294 (4%) Query: 116 KFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFA 175 F+ R +F + + L + H Sbjct: 745 DFETLLQRADTATNRAKSDGRNTYRFFAPEMQLRSAHTLRL-ETALRRALERNELVLH-- 801 Query: 176 FHPIVDPLS-RRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTMA 229 + P +D + R+ EA+++ SP+ G I A Sbjct: 802 YQPQIDLVDFGRVAGVEALIRWQHPEFGLVSPAEFIPIAESTGLILPIGEWVMQTALLQL 861 Query: 230 HALELGDKM---ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFD 286 A +L + +NL + + + + + L + +E TES ++ Sbjct: 862 KAWQLAGLQLGQVGVNLSAHQF-RQQNLPATVARILAEAGLPASCLELELTESAMMDDPV 920 Query: 287 EFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQ 346 + +L G+ ++ID FG G++ L L RF+ D++KI Q + ++ + +AI++ Sbjct: 921 AAVAMMDALHRDGVRMSIDDFGTGYSSLNYLKRFRIDKLKIDQSFVRDLTQDPEGEAIVE 980 Query: 347 AIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWP 400 AI+ +L + A GV PE+ +L ++G + QG LF++ ++ Sbjct: 981 AIVSLARTLRFRTIAEGVEKPEQLAFLRASGCQEVQGYLFSRPLPPDELAVWLR 1034 >UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L987_TOLAT Length = 1098 Score = 288 bits (737), Expect = 3e-76, Method: Composition-based stats. Identities = 60/292 (20%), Positives = 115/292 (39%), Gaps = 16/292 (5%) Query: 108 AVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALS 167 +++ + S + +R + YF LF+ + EL+ Sbjct: 781 SLYPEHGSTAEELMQQADTAMYRAKHDGRDGYRYF-----SEELFLKAKARLELEQRLHR 835 Query: 168 PTINDHFA--FHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEI---YTA 217 F + P + + +II EA+++ ++ PS + G I Sbjct: 836 AITGQEFKVFYQPQISIKTNQIIGAEALLRWDDPEYGLIPPSEFISVAEETGLIQNIGEW 895 Query: 218 DLKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFT 277 L L +++NL P+ L + D + + + + +E T Sbjct: 896 VLYETCRQGRDWLDQHLPPINLAVNLSPLQL-HHGDVRQLIGTILHNSGFPAHHLELELT 954 Query: 278 ESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHK 337 ES ++ + +E + ++ L+ GI +AID FG G++ L L +F D +KI + + ++ Sbjct: 955 ESALMEQQEETVKILQGLRQQGIRIAIDDFGTGYSSLAYLKQFPLDVLKIDKRFVEDIPH 1014 Query: 338 SGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 I I+ SL + V A GV T + +LE G + +QG L++ Sbjct: 1015 ERDDMEIAATIVAMGHSLRLTVLAEGVETKAQLEFLEQQGCDYYQGYLYSMP 1066 >UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7P0M4_CHRVO Length = 633 Score = 288 bits (737), Expect = 3e-76, Method: Composition-based stats. Identities = 57/297 (19%), Positives = 116/297 (39%), Gaps = 12/297 (4%) Query: 115 SKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF 174 S Q + L + ++ ++ + + L + + Sbjct: 334 SDIQTLLMNADLAMYHAKAHGRNTFRFYTREM-NTQVAERLLMENRLRRAMEQEQL--YL 390 Query: 175 AFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTMA 229 + P D +R++ EA+++ + P G I A A Sbjct: 391 VYQPQYDMAGQRLLGCEALLRWRDPDEGLIMPGRFIPVAEDTGLIVPLGRWVLDQACRQA 450 Query: 230 HAL---ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFD 286 L +++N+ L+ D + + ++ +AL + +E TES +++ D Sbjct: 451 SLWLRAGLEPMRVAVNVSAHQLMRH-DFIDDVREALQRHALPGHCLELEVTESTLMADAD 509 Query: 287 EFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQ 346 + + +KA G+ +AID FG G++ L L RF PD +KI + I+++ AI+ Sbjct: 510 LASRQLAVIKAMGVRLAIDDFGTGYSSLAYLKRFAPDLVKIDRSFISDLPGDEENAAIVS 569 Query: 347 AIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEKK 403 AI+ +L ++ A GV + +L++ G E QG L + + +++ Sbjct: 570 AIVHLAGALGMETLAEGVENENQQRFLQTLGCEAMQGYLLGSPLAEEMMTRRLEQQQ 626 >UniRef50_A0YP68 Hybrid signal transduction histidine kinase and diguanylatecyclase/phosphodiesterase n=2 Tax=Oscillatoriales RepID=A0YP68_9CYAN Length = 575 Score = 288 bits (737), Expect = 3e-76, Method: Composition-based stats. Identities = 63/240 (26%), Positives = 110/240 (45%), Gaps = 11/240 (4%) Query: 160 ELDSCALSPTINDHF--AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDG 212 L++ ++ F + P VD + +II EA+++ E SP+ + G Sbjct: 319 ALENDLRQALEHNQFQLYYQPKVDLKTGQIIGAEALIRWIESKRGFVSPAVFIPLAEEIG 378 Query: 213 EIYTAD---LKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVP 269 I L++ H L L +++NL N PD +L + A L Sbjct: 379 LIEPIGEWVLRTACRQTKTWHKLGLETLKMAVNLSGCQF-NLPDICPMVLETLLAEDLPS 437 Query: 270 EQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQ 329 + +E TES ++ D + + LKA G+ +AID FG G++ L L +F D +K+ + Sbjct: 438 SCLELELTESFLVEHEDASIQKLNRLKALGLKIAIDDFGTGYSSLSYLQQFPFDVLKLDR 497 Query: 330 ELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 + N+ ++ + I++A+IK L ++V A GV T E L ++ QG LF++ Sbjct: 498 CFVQNIDQNPKNKIIVEAVIKMAHQLNLEVVAEGVETTAELHVLRQYQCDIIQGYLFSRP 557 >UniRef50_Q47ED8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47ED8_DECAR Length = 827 Score = 288 bits (737), Expect = 3e-76, Method: Composition-based stats. Identities = 69/407 (16%), Positives = 141/407 (34%), Gaps = 45/407 (11%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHY 72 +++ + A R N + G+L + +F + + ++ ++ + + R Sbjct: 410 ERLSRAIGQARRHNKRV---GMLFLDLDYFKHINDSLGHAVGDQLLQQVAERLIVCIRDT 466 Query: 73 NIV---------------ELLCD--YAPARRFGKAGMELFDL--RLHERDDVLQAVFDKG 113 + V E D + LH + +++ Sbjct: 467 DTVCRQGGDEFVILLAEIEQARDAAPIAEKLLAAFAEPCLIAGNELHVSLSIGISIYPDD 526 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSW---LFIADGSDKELDSCALSPTI 170 + + +F LFI + L Sbjct: 527 GMDADTVMKNADTAMYHAKANGRNNYQFFTTEMNTRAVRRLFIEGNLRRALRQGEFM--- 583 Query: 171 NDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTAD---LKSK 222 + P +D S +I EA+++ + P + G I L+ Sbjct: 584 ---LYYQPKIDLASGMMIGSEALIRWQDPEHGLVYPKQFVPIAEESGLIVPIGSWVLREA 640 Query: 223 ALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVI 282 L +S+N+ + D + + +K ++P + +E TES ++ Sbjct: 641 CRQVRAWQESGLVAVPVSVNISAVEF-RHKDFLEGVALILKETGMLPSYLELELTESILM 699 Query: 283 SRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQ 342 + A +++LK G+ +AID FG G++ L L RF + +KI Q + ++ Sbjct: 700 HDAESSATVLEALKTMGMQLAIDDFGTGYSSLSYLKRFPINTLKIDQSFVHDIAIDPDDA 759 Query: 343 AIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 +I+ A+I +L+ +V A GV T E+ +L + + QG LF + Sbjct: 760 SIVGAMIGMGKNLKQRVVAEGVETEEQLAFLRTLHCDEGQGFLFGRP 806 >UniRef50_Q07J13 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Rhodopseudomonas palustris RepID=Q07J13_RHOP5 Length = 891 Score = 288 bits (737), Expect = 3e-76, Method: Composition-based stats. Identities = 61/307 (19%), Positives = 119/307 (38%), Gaps = 18/307 (5%) Query: 94 LFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFI 153 + RL + A+ + + L + +F+ E Sbjct: 573 CGEHRLSADASIGIAIAPQDGKTLDDLVSNADLALYAAKSEGRRTYRFFKPEME------ 626 Query: 154 ADGSDKELDSCALSPTINDH---FAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIA 205 + L L + +H F P+VD S +++ EA+++ SP+ Sbjct: 627 VALKARHLLGADLKRAVVEHQFDVHFQPLVDLRSDQVVGCEALLRWRHPTRGMVSPAEFV 686 Query: 206 VGQRKDGEIYTADLKSKALAFTMAHALELG-DKMISINLLPMTLVNEPDAVSFLLNEIKA 264 + G I +L LA + A +++N+ P+ + + Sbjct: 687 PVAEEIGLI--DELGEWVLAESCREAATWPAHMTVAVNVSPIQFRRRT-FPLKVAAALGQ 743 Query: 265 NALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDR 324 + L +++ +E TE+ +I D + L+A G+ +A+D FG G++ L L RF D+ Sbjct: 744 SGLPAQRLELEITEAVLIRDDDAALAILHELRALGVKIALDDFGTGYSSLSYLHRFPFDK 803 Query: 325 IKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGD 384 IKI + + + + I+QA++ + + A GV T ++ L+ G + QG Sbjct: 804 IKIDRSFVATLAEEKASATIVQAVVSIAAAGDKITLAEGVETIQQRDLLKQFGCQQMQGY 863 Query: 385 LFAKAKL 391 LF+ Sbjct: 864 LFSPPVP 870 >UniRef50_Q2B961 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B961_9BACI Length = 974 Score = 288 bits (737), Expect = 3e-76, Method: Composition-based stats. Identities = 67/282 (23%), Positives = 111/282 (39%), Gaps = 16/282 (5%) Query: 118 QLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF--A 175 + + + R+ + TY+ + L EL+S F Sbjct: 680 ETLMKNADIAMNRSKHQGGNRLTYYSTEMNEQTLLKL-----ELESYLRKALQKKEFFLC 734 Query: 176 FHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTAD---LKSKALAFT 227 + P+ + + I EA+++ N SP + G I L++ Sbjct: 735 YQPLTNLETGAIYGSEALIRWNHPKLGLVSPGDFIPLAEETGLINEIGHWVLQTACRQTK 794 Query: 228 MAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDE 287 H LG +S+N+ +P V +L +K L P+ +++E TES ++ + Sbjct: 795 EWHNKGLGSLTVSVNVSVHQF-QQPGFVHKVLQVLKETMLEPQFLVLELTESSMLRNMEN 853 Query: 288 FAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQA 347 I+ L+ GI VAID FG G++ L L D +KI + I N+ P AI+ A Sbjct: 854 SILVIQELQRNGIRVAIDDFGTGYSSLSYLKHLPIDALKIDRSFIDNLRSGSPDIAIVNA 913 Query: 348 IIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 II L ++V A GV T E+ L+ QG + Sbjct: 914 IITMGLGLHVKVVAEGVETAEQMRLLKDLKCHFAQGFFIHRP 955 >UniRef50_B9QWG1 Ammonium transporter, putative n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QWG1_9RHOB Length = 1043 Score = 287 bits (736), Expect = 4e-76, Method: Composition-based stats. Identities = 62/283 (21%), Positives = 118/283 (41%), Gaps = 14/283 (4%) Query: 116 KFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFA 175 + + + + + F + +E++ + +D F Sbjct: 731 SEEQVVSNADIALYNAKSAGRQTYCLF-----RKGMGAEVRQRREMEKDLHAALADDQFE 785 Query: 176 --FHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTM 228 F P ++ + I+++EA+++ N SP G+I A + Sbjct: 786 LYFQPRLNLATGNIVSYEALIRWNHPDHGLVSPVEFIPVAENSGQIIGIGKFVLERALAV 845 Query: 229 AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEF 288 A A E+ IS+N+ P+ + D + + IKA+ + +I +E TE+ +I Sbjct: 846 A-AQEIPTGNISLNVSPVQF-RDKDFIEDVARAIKASGIPANRIELEITENTLIEDDARA 903 Query: 289 AEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAI 348 + LK G+ +A+D FG G++ L LSRF D IKI + + ++ AII+A+ Sbjct: 904 LSILTKLKDIGVKIALDDFGVGYSSLSYLSRFPFDCIKIDRSFVLEAQQNYNALAIIEAV 963 Query: 349 IKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 ++ +L++++ A G+ E L + G QG L K Sbjct: 964 VRLGKALDMRIVAEGLEDTENLCLLAAQGCHEVQGYLIGKPVP 1006 >UniRef50_Q0C2A3 Putative sensory box-containing diguanylate cyclase n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C2A3_HYPNA Length = 792 Score = 287 bits (736), Expect = 4e-76, Method: Composition-based stats. Identities = 72/313 (23%), Positives = 135/313 (43%), Gaps = 15/313 (4%) Query: 86 RFGKAGMELFDL---RLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYF 142 +F EL+D+ + + +FD + + L ++ L + F Sbjct: 453 QFASEMSELYDVWGSTANSSASIGVRLFDPAIHDSRTMFRQADLALYQAKHLGKAKWCMF 512 Query: 143 EIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-- 200 + E D +EL + H F PIVD + + +A E +++ Sbjct: 513 DDELEQRAQARLD-IQEELQRAIDRNELRIH--FQPIVDATTHKTVACETLLRWQHPERG 569 Query: 201 ---PSAIAVGQRKDGEIYTADLKSKALAFTMAHALELGDK-MISINLLPMTLVNEPDAVS 256 P ++G I + + +A A L + I +N+ P+ + + S Sbjct: 570 LVYPGEFIEHAEENGLITR--MGEWVIRAALAEATRLPEHVRICVNISPLQV-HSASLAS 626 Query: 257 FLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLL 316 ++N I A+ + P ++ +E TE+ ++S + + L++ G+ +A+D FG GF+ L Sbjct: 627 TIVNAIAASNMDPSRLELEITETALMSNTEFTLRRLHQLRSLGVRIALDDFGTGFSSLNH 686 Query: 317 LSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESA 376 L F DRIKI + ++++ QAI ++++ SL +Q +A GV T + +L Sbjct: 687 LRSFPFDRIKIDRTFVSDIETRADSQAITKSMVSLARSLGMQCTAEGVETSLQAEYLSKL 746 Query: 377 GIEMFQGDLFAKA 389 G E QG F+ A Sbjct: 747 GCEELQGYFFSHA 759 >UniRef50_C6D7W4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=C6D7W4_PAESJ Length = 1095 Score = 287 bits (736), Expect = 4e-76, Method: Composition-based stats. Identities = 63/304 (20%), Positives = 119/304 (39%), Gaps = 14/304 (4%) Query: 96 DLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIAD 155 D L + +++ + FR L F + + Sbjct: 623 DYELFITTSIGISIYPNDGDDSSTLMKNADSALFRAKDLGKNGYQIFTSSM-NVQTYKVF 681 Query: 156 GSDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRK 210 +K+L + + P V+ + I+ EA+++ N SP+ + Sbjct: 682 TLEKDLRKAIQRDEL--EMYYQPKVNIHTGEIVGAEALIRWNHPEWGLVSPNEFIPISEE 739 Query: 211 DGEIYTADLKSK---ALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANAL 267 G I + K L ISIN+ +++ D + + + L Sbjct: 740 TGLILSLGNWVKRTVCRQNKEWQLAGLKPIPISINVTAKRFLSK-DFMDAIQQILAETGL 798 Query: 268 VPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQ--PDRI 325 P + +E TES ++ + + SL G+++++D FG G++ L L RF+ + + Sbjct: 799 EPHYLEIEITESSLLENAETVMHTLDSLNKLGVTISLDDFGTGYSSLSYLKRFKHTINIL 858 Query: 326 KISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDL 385 KI + I ++H+ AII AII+ + + V A GV T E+ L+ ++ QG L Sbjct: 859 KIDRSFIHDLHQGSDDNAIISAIIQLAQHMNMSVVAEGVETGEQLHILKLLKCDLVQGYL 918 Query: 386 FAKA 389 F++ Sbjct: 919 FSRP 922 >UniRef50_A0RLD3 Diguanylate cyclase/phosphodiesterase n=79 Tax=cellular organisms RepID=A0RLD3_BACAH Length = 910 Score = 287 bits (736), Expect = 4e-76, Method: Composition-based stats. Identities = 64/285 (22%), Positives = 118/285 (41%), Gaps = 16/285 (5%) Query: 115 SKFQLTYDDRALQFFRTFVLATEQSTYF--EIPAEDSWLFIADGSDKELDSCALSPTIND 172 + + + +R + +F E+ + +G EL Sbjct: 616 TDVTELMKNADMAMYRAKANGKNRFVFFSKEMSIAQNESNFLEG---ELSKALQQN--EF 670 Query: 173 HFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTAD---LKSKAL 224 + P V +++II FEA+++ SP+ + G I L++ L Sbjct: 671 FLEYQPQVSTKTKQIIGFEALIRWKHPKLGIVSPAQFIPLAEETGFIIELGNWILRTACL 730 Query: 225 AFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISR 284 H + +NL + N D + + ++ L PE + +E TES I++ Sbjct: 731 EAKRWHNQGFSHLKVGVNLSVVQF-NHADLIPTISKVLEETELKPEALDIEITESIAINQ 789 Query: 285 FDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAI 344 ++ L+ GI ++ID FG G++ L L+++ + +KI++E I + S +AI Sbjct: 790 NQSVVAKLEQLQNLGIQISIDDFGTGYSSLAYLTKYPINTLKIAREFICGITTSPLEEAI 849 Query: 345 IQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 I +II L ++V A GV T E+W +L + QG +K Sbjct: 850 ISSIITLSKELNLEVIAEGVETEEQWKFLYEQNCDHIQGFFISKP 894 >UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YAT8_NITMU Length = 705 Score = 287 bits (736), Expect = 4e-76, Method: Composition-based stats. Identities = 67/290 (23%), Positives = 117/290 (40%), Gaps = 17/290 (5%) Query: 111 DKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTI 170 D G LT + + + ++ L A L+ Sbjct: 410 DNGKDASSLT-RNADAAMYSAKGQGRNRYQFY-----SEDLTYAAAERLRLEHDLRGALS 463 Query: 171 NDHF--AFHPIVDPLSRRIIAFEAIVQKNE-----DSPSAIAVGQRKDGEIYTAD---LK 220 D + P ++ + R+I EA+++ N SP++ G I L+ Sbjct: 464 RDEIFPLYQPQIELATGRVIGVEALMRWNRAGQGLISPASFIPVAEDSGLILALGEYILR 523 Query: 221 SKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESE 280 L H + I++N+ + + D +L + PE + +E TES Sbjct: 524 KACLQARQWHEHQGFQGTIAVNVSAVQF-RQNDFTDVVLRVLSETGFPPECLELEVTESV 582 Query: 281 VISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGP 340 V+ + + + L++ GI +AID FG G++ L L +F DR+KI Q + ++ Sbjct: 583 VMQGLESVVQKMGILESHGIKLAIDDFGTGYSSLSYLRQFAIDRLKIDQSFVRDLPGDAD 642 Query: 341 RQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 QAII+AI+ SL ++V A GV T + +L+ QG L+A+ Sbjct: 643 AQAIIRAIVAMGRSLGLRVMAEGVETEAQARFLQDIECTESQGYLYARPM 692 >UniRef50_B7KHV9 Diguanylate cyclase/phosphodiesterase with GAF sensor n=3 Tax=Cyanobacteria RepID=B7KHV9_CYAP7 Length = 1262 Score = 287 bits (736), Expect = 4e-76, Method: Composition-based stats. Identities = 54/284 (19%), Positives = 112/284 (39%), Gaps = 17/284 (5%) Query: 116 KFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFA 175 ++ + + + ++ D + L++ + F Sbjct: 553 TAEILLKNAESAMYEAKKQGKNTYQIYRPGSDH------DKNKLILEADLRKAIERNEFV 606 Query: 176 --FHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTAD---LKSKALA 225 + P +D +R++I EA+++ S P+ + G I L++ Sbjct: 607 LHYQPQIDLNTRKLIGVEALIRWQHPSLGMVSPALFIPLAEETGLICPLGEWVLRTACHQ 666 Query: 226 FTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 + + +++NL L + D V+ + +K + P + +E TE+ V+ Sbjct: 667 YRIWQKAGFPKIQMAVNLSAFQLQQD-DIVARIAMILKETGMTPSDLELEITETTVMENL 725 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 ++ ++ LK GI +AID FG G++ L +L D +KI + + ++ + Sbjct: 726 EQMTAILEQLKQMGIKIAIDDFGTGYSSLNVLKHLPVDTLKIDKSFVQDITLDSNDAKLC 785 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 Q II + E+ V A GV T + +L S + QG L ++ Sbjct: 786 QGIIMLGKAFELDVLAEGVETFTQLEFLRSLNCDRAQGYLISRP 829 >UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Betaproteobacteria RepID=Q47GC0_DECAR Length = 862 Score = 287 bits (736), Expect = 4e-76, Method: Composition-based stats. Identities = 60/310 (19%), Positives = 115/310 (37%), Gaps = 15/310 (4%) Query: 89 KAGMELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAED 148 +L + H + +F L ++ +F+ E Sbjct: 510 NQTYQLGHVTHHSSASIGATLFKGPLIPIDDLMKQADLSMYKAKAAGRNAVRFFDPSME- 568 Query: 149 SWLFIADGSDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSA 203 IA E++ L F H + R+ E +++ SP+ Sbjct: 569 ----IAVKVRAEMEDDLLRALAEKQFLLHYQAQMVGERLTGAEVLLRWQHPQRGMVSPAE 624 Query: 204 IAVGQRKDGEIYTADLKSKALAFTM-AHALELGD---KMISINLLPMTLVNEPDAVSFLL 259 + G I A T A + +++N+ + D V +L Sbjct: 625 FIPLAEETGLILPLGHWVLETACTQLAQWAGRPEVAHLTLAVNVSAHQF-RQNDFVDQVL 683 Query: 260 NEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSR 319 ++ P+++ +E TES ++ ++ + + +LK G+ ++D FG G++ L L R Sbjct: 684 GVLEKTGANPQRLKLELTESLLVENVEDIIDKMAALKHRGVGFSLDDFGTGYSSLSYLKR 743 Query: 320 FQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIE 379 D +KI Q + +V +I + I+ SL + V A GV T + +L S+G Sbjct: 744 LPLDHLKIDQSFVRDVLTDSNDASIARTIVALANSLGLGVIAEGVETEAQRDFLASSGCH 803 Query: 380 MFQGDLFAKA 389 +QG F++ Sbjct: 804 TYQGYYFSRP 813 >UniRef50_A4U3H4 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U3H4_9PROT Length = 904 Score = 287 bits (736), Expect = 4e-76, Method: Composition-based stats. Identities = 61/293 (20%), Positives = 115/293 (39%), Gaps = 18/293 (6%) Query: 108 AVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALS 167 A G L ++ +F+ E++ + ++++ Sbjct: 604 ATLFFGHVVADDLLKQSDLAMYKAKAEGGASIHFFDPKMEEAVI-----KRAKIEADLRQ 658 Query: 168 PTINDHF--AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLK 220 I F + P + + R+ EA+V+ PS + G I Sbjct: 659 GLIKKQFLLHYQPQI-FSNGRMTGVEALVRWQHPVRGLVPPSDFIPLAEETGLILQLGNW 717 Query: 221 SKALAFTMAHAL----ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEF 276 A EL D +++N+ + ++P+ V + I+ PE++ +E Sbjct: 718 VLEAACKQLAEWATRPELADLTVAVNVS-VQQFHQPEFVDHIQEVIRVTGANPERLKLEL 776 Query: 277 TESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVH 336 TES + + + + +LKA GI ++D FG G++ L L + D++KI Q + +V Sbjct: 777 TESMLAENVQDIIKKMFALKADGIGFSLDDFGTGYSSLSYLKQLPLDQLKIDQSFVRDVL 836 Query: 337 KSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 I + I+ SL + V A GV T + +LE++G QG F++ Sbjct: 837 TDPSDATIAKTIVNLAQSLGLSVIAEGVETEAQRNFLETSGCHSCQGYFFSRP 889 >UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=16 Tax=Proteobacteria RepID=A1RPJ9_SHESW Length = 1511 Score = 287 bits (736), Expect = 4e-76, Method: Composition-based stats. Identities = 60/277 (21%), Positives = 105/277 (37%), Gaps = 19/277 (6%) Query: 124 RALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH---FAFHPIV 180 + L + + + L L I+ + + P Sbjct: 1224 ADTAMYHAKSLGRNNFQF------YTHKLNEIATRHVLLEAGLKQAIHRNELSLVYQPKF 1277 Query: 181 DPLSRRIIAFEAIVQKNE-----DSPSAIAVGQRKDGEIYTADLKS---KALAFTMAHAL 232 + EA+++ + SP + G I +AL Sbjct: 1278 SLRDGSLTGLEALLRWHHTELGPISPVEFIPLAEETGIINQIGHWVINHACQQLAEWNAL 1337 Query: 233 ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAI 292 + +++NL L + D +S + + + L + + +E TES ++ + + Sbjct: 1338 GFNNISMAVNLSARQL--KADIISTIEVALAVSGLPAQSLELELTESMIMGNPQDSVSIL 1395 Query: 293 KSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCC 352 LKA G+++AID FG G++ L L RF D +KI +E + ++ AI AII Sbjct: 1396 SKLKALGLTIAIDDFGTGYSSLSYLKRFPIDTLKIDREFVRDITNDPDDAAITSAIIALA 1455 Query: 353 TSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 SLE+ V A GV T + +L G + QG L +K Sbjct: 1456 HSLELNVVAEGVETQAQLNFLGLQGCDEVQGFLLSKP 1492 >UniRef50_Q602I2 Sensory box protein/response regulator n=1 Tax=Methylococcus capsulatus RepID=Q602I2_METCA Length = 710 Score = 287 bits (736), Expect = 4e-76, Method: Composition-based stats. Identities = 65/308 (21%), Positives = 115/308 (37%), Gaps = 11/308 (3%) Query: 93 ELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLF 152 L D H + VF + + + F + + Sbjct: 389 RLGDQLAHVSASIGITVFPDDAADTDGLLRNADQAMYAAKRAGRNGYQAFNPEMQRAMSM 448 Query: 153 IADGSDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVG 207 S + L + + H + PIV+ S R+ EA+++ SP+A Sbjct: 449 RVRLS-QALRDAVQAGQLRLH--YQPIVELASGRVRKAEALLRWEHPEFGEVSPAAFIPI 505 Query: 208 QRKDGEIYTADLKSKALAFTMAHALELG---DKMISINLLPMTLVNEPDAVSFLLNEIKA 264 G I+ A A D +SIN+ P L + Sbjct: 506 AEDCGSIHCIGDWVFERAACQAARWRSRFGTDFQVSINVSPRQFQAGGRDFGRWLERLGE 565 Query: 265 NALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDR 324 L + +E TE+ ++ A+ + +AAG+ +A+D FG G++ L L F+ D Sbjct: 566 LGLDGSMLALEITETLLMDTDQAIADKLAQFRAAGVQIALDDFGTGYSSLAYLKEFRIDY 625 Query: 325 IKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGD 384 +KI + + ++ + +AI+ L ++V A GV TP+++ LE G + FQG Sbjct: 626 LKIDRTFVRDMTPDSKSFLLSEAIVTMAHRLGLKVIAEGVETPQQYALLERIGCDYFQGY 685 Query: 385 LFAKAKLN 392 LF++ Sbjct: 686 LFSRPLPE 693 >UniRef50_C6E7Z7 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=3 Tax=Geobacter RepID=C6E7Z7_GEOSM Length = 721 Score = 287 bits (735), Expect = 5e-76, Method: Composition-based stats. Identities = 64/295 (21%), Positives = 117/295 (39%), Gaps = 19/295 (6%) Query: 119 LTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKE-LDSCALSPTINDHFA-- 175 + + + F+ + +++ L S + F Sbjct: 410 ELLMNADIAMYHAKACGKNVYKMFDRKMNEH------ANERVTLLSDLRLALEREEFVLH 463 Query: 176 FHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYT---ADLKSKALAFT 227 + P VD L+ + + EA+V+ +P + G I L++ Sbjct: 464 YQPKVDLLTGNVTSVEALVRWMHPRLGMLAPDKFIRLSEESGFIVELTDWVLRTACTQAK 523 Query: 228 MAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDE 287 LG +++NL P + D + + + A L P + +E TES ++ + Sbjct: 524 KWQEQNLGSVRVAVNLSPYHFQRQ-DVKEAIFSVLDATGLEPALLEIEITESALMQNDEY 582 Query: 288 FAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQA 347 + L+ G+++++D FG G++ L L RF + +KI + I N+ KS QAI+ A Sbjct: 583 TCALFRELRELGMTISVDDFGTGYSSLSYLHRFPINTLKIDRTFILNMMKSSEDQAIVTA 642 Query: 348 IIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA-KLNGIPSIAWPE 401 II SL +Q+ A GV T ++ L+ G QG L ++ + PE Sbjct: 643 IIAMAKSLNMQIVAEGVETVDQLEKLKDQGCHEIQGFLVSRPVAAESVTQFFTPE 697 >UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHI4_CELJU Length = 595 Score = 287 bits (735), Expect = 5e-76, Method: Composition-based stats. Identities = 58/285 (20%), Positives = 112/285 (39%), Gaps = 18/285 (6%) Query: 116 KFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWL---FIADGSDKELDSCALSPTIND 172 Q + + +R ++ + L + + K L+ Sbjct: 289 DEQALMKNADIAMYRAKEEGKNNYQFYSPDLKVRSLERLMLENNLRKALERH------EF 342 Query: 173 HFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFT 227 + + + +I EA+V+ SP+ + G I A T Sbjct: 343 FLHYQAKRNLKTGKIAGVEALVRWQHPELGTISPAHFIPLAEETGLIVHLGRWVLRAACT 402 Query: 228 M---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISR 284 L I++NL ++ + ++ + N ++ + L PE + +E TE ++ Sbjct: 403 QGVIWQQQGLPPICIAVNLSARQFFDD-NLINDIANALRESGLAPELLEMEITEGMIMQD 461 Query: 285 FDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAI 344 + + +KA G+ +AID FG G++ L + RF D +K+ I ++ + +AI Sbjct: 462 AERAIRILTGIKALGVRLAIDDFGVGYSSLAHIKRFPIDTLKVDSSFIRDIPANREDRAI 521 Query: 345 IQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 +AII +L + V A GV T E+ +L + + QG F+K Sbjct: 522 TEAIIAMGKTLSLTVIAEGVETQEQENFLRDSACDQTQGYYFSKP 566 >UniRef50_A3JIW6 Two-component response regulator n=3 Tax=Marinobacter sp. ELB17 RepID=A3JIW6_9ALTE Length = 848 Score = 287 bits (735), Expect = 5e-76, Method: Composition-based stats. Identities = 67/305 (21%), Positives = 128/305 (41%), Gaps = 18/305 (5%) Query: 98 RLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGS 157 RL + A D + + D+ AL + + G+ Sbjct: 541 RLSISASIGIASDDGSVEQPKELLDNAALAVREAKRQGGNTFCW------NHGAASTAGT 594 Query: 158 DKELDSCALSPTIND-HFA--FHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQR 209 ++ + C L I F + P+V+ + R+ + EA+V+ N + P A Sbjct: 595 EQVIMRCELMEAIEARQFVVYYQPLVEAKTGRLRSAEALVRWNHPARGLLLPGAFISLAE 654 Query: 210 KDGEIYTADLKS---KALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANA 266 + G+I + I++N+ P+ P+ + +L ++A+ Sbjct: 655 QTGQIVAIGRWVLHQACMDMAQRWRQTGQAVSIAVNISPLQF-RRPEFIDDVLAVLEASG 713 Query: 267 LVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIK 326 L PE + +E TE ++S D+ ++SL+ G+ VAID FG GF+ L L + ++K Sbjct: 714 LPPELLELEVTEGVLLSGIDKAISMLESLRDLGVQVAIDDFGTGFSSLSYLRQLPITKVK 773 Query: 327 ISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLF 386 + + I +V AI+Q +I L + V A G+ T E+ +L ++ ++ QG L+ Sbjct: 774 LDRSFIIDVTTDRGSAAIVQGVITMAHHLGLLVVAEGIETVEQQNYLAASDCDLLQGFLY 833 Query: 387 AKAKL 391 ++ Sbjct: 834 SRPVP 838 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/P... 528 e-148 UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteo... 526 e-148 UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/P... 507 e-142 UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/P... 505 e-141 UniRef50_C6MMM5 Response regulator receiver modulated diguanylat... 502 e-141 UniRef50_Q47ED8 Response regulator receiver modulated diguanylat... 502 e-140 UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxaloba... 501 e-140 UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultu... 500 e-140 UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammapr... 498 e-139 UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 497 e-139 UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/P... 496 e-139 UniRef50_Q3A2X0 Motility repressor MorA n=1 Tax=Pelobacter carbi... 496 e-139 UniRef50_C5S5K8 Response regulator receiver modulated diguanylat... 494 e-138 UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/P... 493 e-138 UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Ta... 493 e-138 UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/P... 492 e-138 UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ge... 492 e-138 UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/P... 491 e-137 UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Hermini... 491 e-137 UniRef50_C6ME82 Response regulator receiver modulated diguanylat... 491 e-137 UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/P... 491 e-137 UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/P... 491 e-137 UniRef50_C1DB08 Predicted signal transduction protein containing... 491 e-137 UniRef50_C6ML43 Response regulator receiver modulated diguanylat... 490 e-137 UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/P... 489 e-137 UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/P... 489 e-137 UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 489 e-136 UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthin... 487 e-136 UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 487 e-136 UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 487 e-136 UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 487 e-136 UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (... 487 e-136 UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodi... 487 e-136 UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus... 486 e-136 UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax... 486 e-136 UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromato... 486 e-136 UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 486 e-136 UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/P... 485 e-136 UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Co... 485 e-135 UniRef50_A4U4R0 Sensory box/GGDEF family protein n=3 Tax=Magneto... 485 e-135 UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/P... 484 e-135 UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribac... 484 e-135 UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/P... 484 e-135 UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya... 484 e-135 UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Ma... 484 e-135 UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/P... 484 e-135 UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/P... 484 e-135 UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/P... 483 e-135 UniRef50_C6E011 Response regulator receiver modulated diguanylat... 483 e-135 UniRef50_A1TX84 Response regulator receiver modulated diguanylat... 482 e-135 UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/P... 482 e-134 UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/P... 481 e-134 UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 481 e-134 UniRef50_Q3A1F4 Response regulator receiver modulated diguanylat... 481 e-134 UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/P... 481 e-134 UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/P... 481 e-134 UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 481 e-134 UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 479 e-134 UniRef50_A7BQZ3 Sensory box/GGDEF family protein n=1 Tax=Beggiat... 479 e-134 UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobact... 479 e-134 UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 T... 478 e-133 UniRef50_Q89HX5 Bll5864 protein n=1 Tax=Bradyrhizobium japonicum... 478 e-133 UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 478 e-133 UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria Re... 477 e-133 UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Le... 477 e-133 UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/P... 477 e-133 UniRef50_Q1K1R0 Response regulator receiver modulated diguanylat... 477 e-133 UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/P... 477 e-133 UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ni... 476 e-133 UniRef50_A8FYM5 Signal transduction protein containing a membran... 476 e-133 UniRef50_B1ZGT4 Diguanylate cyclase/phosphodiesterase n=6 Tax=Me... 476 e-133 UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus ... 476 e-133 UniRef50_A5GBG4 Response regulator receiver modulated diguanylat... 476 e-133 UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacteriu... 475 e-132 UniRef50_Q89VU0 Bll0955 protein n=2 Tax=cellular organisms RepID... 475 e-132 UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/P... 475 e-132 UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibac... 475 e-132 UniRef50_A1SZV0 Response regulator receiver modulated diguanylat... 474 e-132 UniRef50_A0LKD9 Response regulator receiver modulated diguanylat... 474 e-132 UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum a... 474 e-132 UniRef50_B0CAC5 Diguanylate cyclase/phosphodiesterase n=7 Tax=ce... 473 e-132 UniRef50_Q2SFK1 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC ... 473 e-132 UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/P... 472 e-132 UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/P... 472 e-132 UniRef50_Q1JZB1 Diguanylate cyclase/phosphodiesterase with PAS/P... 472 e-132 UniRef50_Q1H2G8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 472 e-131 UniRef50_C5CTK8 Diguanylate cyclase/phosphodiesterase with PAS/P... 472 e-131 UniRef50_A4G3M6 Putative two-component response regulator n=1 Ta... 472 e-131 UniRef50_A1ASK8 Response regulator receiver modulated diguanylat... 471 e-131 UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromob... 471 e-131 UniRef50_Q47HF3 Response regulator receiver modulated diguanylat... 471 e-131 UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromob... 470 e-131 UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase... 470 e-131 UniRef50_Q3A4W5 Response regulator receiver modulated diguanylat... 470 e-131 UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/P... 470 e-131 UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ac... 470 e-131 UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/P... 470 e-131 UniRef50_B8H3B9 Sensory box/GGDEF family protein n=5 Tax=Cauloba... 470 e-131 UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 470 e-131 UniRef50_B8HWB1 Diguanylate cyclase/phosphodiesterase with FHA a... 469 e-131 UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/P... 469 e-131 UniRef50_Q3JBM4 Sensor protein n=4 Tax=Bacteria RepID=Q3JBM4_NITOC 469 e-131 UniRef50_A0LH12 Response regulator receiver modulated diguanylat... 469 e-131 UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 469 e-131 UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling p... 469 e-131 UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/P... 469 e-131 UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/P... 469 e-130 UniRef50_C6X7I8 Response regulator receiver modulated diguanylat... 468 e-130 UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncult... 468 e-130 UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (... 468 e-130 UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/P... 467 e-130 UniRef50_Q2SF23 Predicted signal transduction protein containing... 467 e-130 UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS... 467 e-130 UniRef50_Q0BFB8 Response regulator receiver modulated diguanylat... 467 e-130 UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsul... 467 e-130 UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 467 e-130 UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/P... 467 e-130 UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/P... 467 e-130 UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteob... 467 e-130 UniRef50_D2LZH2 Diguanylate cyclase/phosphodiesterase with PAS/P... 466 e-130 UniRef50_A0L8C6 Response regulator receiver modulated diguanylat... 466 e-130 UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/P... 466 e-130 UniRef50_C7RQ11 Response regulator receiver modulated diguanylat... 466 e-130 UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magneto... 465 e-130 UniRef50_Q39SC6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 465 e-129 UniRef50_B7KTV8 Diguanylate cyclase/phosphodiesterase with PAS/P... 465 e-129 UniRef50_Q0F127 Putative uncharacterized protein n=1 Tax=Maripro... 465 e-129 UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 464 e-129 UniRef50_A1K2X7 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 464 e-129 UniRef50_B0UQT2 Diguanylate cyclase/phosphodiesterase with PAS/P... 464 e-129 UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/P... 464 e-129 UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/P... 464 e-129 UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 464 e-129 UniRef50_Q31G31 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 464 e-129 UniRef50_A1K569 EAL/GGDEF/PAS/PAC-domain containing signalling p... 464 e-129 UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/P... 464 e-129 UniRef50_C6D7W4 Diguanylate cyclase/phosphodiesterase with PAS/P... 464 e-129 UniRef50_Q07P60 Diguanylate cyclase/phosphodiesterase with PAS/P... 464 e-129 UniRef50_C1DJP1 Cyclic di-GMP signal transduction protein n=1 Ta... 464 e-129 UniRef50_B7GHW2 Multidomain signal transduction protein (GGDEF a... 463 e-129 UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobact... 463 e-129 UniRef50_Q39WZ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 463 e-129 UniRef50_B5E7Y8 Response regulator receiver modulated diguanylat... 463 e-129 UniRef50_C5V2W0 Response regulator receiver modulated diguanylat... 463 e-129 UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/P... 463 e-129 UniRef50_A2SDI4 Signal transduction protein n=2 Tax=Proteobacter... 463 e-129 UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/P... 462 e-129 UniRef50_C0ZBT6 Probable signaling protein YkoW n=1 Tax=Brevibac... 462 e-129 UniRef50_D1AZY7 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 462 e-128 UniRef50_A6WKV6 Diguanylate cyclase/phosphodiesterase with PAS/P... 462 e-128 UniRef50_B3E9L8 Diguanylate cyclase/phosphodiesterase with PAS/P... 462 e-128 UniRef50_C1DD31 Predicted signal transduction protein containing... 462 e-128 UniRef50_Q20XI9 Diguanylate cyclase/phosphodiesterase n=11 Tax=B... 462 e-128 UniRef50_B9JLU1 Sensory box/GGDEF family protein n=1 Tax=Agrobac... 461 e-128 UniRef50_B7KEB0 Diguanylate cyclase/phosphodiesterase n=6 Tax=Ba... 461 e-128 UniRef50_C6MIL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 461 e-128 UniRef50_Q0EWZ7 Putative uncharacterized protein n=1 Tax=Maripro... 461 e-128 UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 461 e-128 UniRef50_A1ALB3 Response regulator receiver modulated diguanylat... 460 e-128 UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/P... 460 e-128 UniRef50_C6XEG9 Diguanylate cyclase/phosphodiesterase with PAS/P... 460 e-128 UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/P... 460 e-128 UniRef50_D1U882 Diguanylate cyclase/phosphodiesterase with PAS/P... 460 e-128 UniRef50_B8DLW6 Response regulator receiver modulated diguanylat... 460 e-128 UniRef50_B7KBH1 Diguanylate cyclase/phosphodiesterase n=9 Tax=Ch... 460 e-128 UniRef50_A6VW49 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ma... 460 e-128 UniRef50_C1D1W4 Putative diguanylate-cyclase n=1 Tax=Deinococcus... 460 e-128 UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (... 460 e-128 UniRef50_Q1JZ20 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 459 e-128 UniRef50_Q479L8 Diguanylate cyclase/phosphodiesterase with PAS/P... 459 e-128 UniRef50_B8GNC0 Signal transduction protein containing a membran... 459 e-128 UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/P... 459 e-128 UniRef50_B1M2C0 Diguanylate cyclase/phosphodiesterase with PAS/P... 459 e-128 UniRef50_B1XZW3 Diguanylate cyclase/phosphodiesterase with PAS/P... 459 e-127 UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 459 e-127 UniRef50_C5SCB7 Diguanylate cyclase/phosphodiesterase with PAS/P... 459 e-127 UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/P... 459 e-127 UniRef50_Q2W3S8 Predicted signal transduction protein containing... 459 e-127 UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus... 458 e-127 UniRef50_A4U1P1 Sensory box/GGDEF family protein n=1 Tax=Magneto... 458 e-127 UniRef50_B6QZR2 Sensory box/ggdef family protein n=1 Tax=Pseudov... 458 e-127 UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7... 458 e-127 UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/P... 458 e-127 UniRef50_Q3A6S1 Diguanylate cyclase/phosphodiesterase with PAS/P... 457 e-127 UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/P... 457 e-127 UniRef50_Q47AR1 Diguanylate cyclase/phosphodiesterase with PAS/P... 457 e-127 UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 457 e-127 UniRef50_C8SP12 Diguanylate cyclase/phosphodiesterase with PAS/P... 457 e-127 UniRef50_Q2W4Z4 Predicted signal transduction protein containing... 457 e-127 UniRef50_C9Y8E7 Putative uncharacterized protein n=1 Tax=Curviba... 456 e-127 UniRef50_B1M2I6 Diguanylate cyclase/phosphodiesterase with PAS/P... 456 e-127 UniRef50_B4W545 PAS fold family n=1 Tax=Microcoleus chthonoplast... 456 e-127 UniRef50_C6AS31 Diguanylate cyclase/phosphodiesterase with PAS/P... 455 e-126 UniRef50_Q1JY96 Diguanylate cyclase/phosphodiesterase with PAS/P... 455 e-126 UniRef50_B3PHS3 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 455 e-126 UniRef50_Q31GA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 454 e-126 UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/P... 454 e-126 UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/P... 454 e-126 UniRef50_B2UJ08 Diguanylate cyclase/phosphodiesterase n=5 Tax=Ra... 454 e-126 UniRef50_B6BGL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 454 e-126 UniRef50_D1C8G6 Diguanylate cyclase/phosphodiesterase with PAS/P... 454 e-126 UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/P... 454 e-126 UniRef50_B8HRI7 Response regulator receiver modulated diguanylat... 454 e-126 UniRef50_Q07PV4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 454 e-126 UniRef50_Q89WT2 Bll0596 protein n=1 Tax=Bradyrhizobium japonicum... 454 e-126 UniRef50_Q5P8Z7 Sensory box/GGDEF family protein n=3 Tax=cellula... 454 e-126 UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/P... 453 e-126 UniRef50_C5V4D4 Diguanylate cyclase/phosphodiesterase with PAS/P... 453 e-126 UniRef50_A4TX60 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswalden... 453 e-126 UniRef50_A0YBW6 Predicted signal transduction protein containing... 453 e-126 UniRef50_Q88HN4 Sensory box protein/GGDEF domain protein n=1 Tax... 453 e-126 UniRef50_A1WHK4 Diguanylate cyclase/phosphodiesterase with PAS/P... 453 e-126 UniRef50_B8GSM4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 453 e-126 UniRef50_Q2SG37 Predicted signal transduction protein containing... 453 e-126 UniRef50_Q47UD6 Sensory box sensor/GGDEF/EAL domain protein n=1 ... 453 e-126 UniRef50_A0RLD3 Diguanylate cyclase/phosphodiesterase n=79 Tax=c... 453 e-126 UniRef50_Q21FF8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sa... 453 e-126 UniRef50_C7CCD7 Putative diguanylate cyclase (GGDEF) /phosphodie... 453 e-126 UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 452 e-126 UniRef50_Q21SH7 Diguanylate cyclase/phosphodiesterase with PAS/P... 452 e-126 UniRef50_Q2BRN8 Signal transduction protein containing membrane,... 452 e-126 Sequences not found previously or not previously below threshold: UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoa... 475 e-133 UniRef50_D2XIQ4 Putative signal transduction protein n=1 Tax=unc... 470 e-131 UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/P... 469 e-131 UniRef50_Q74BV5 Sensory box/response regulator n=1 Tax=Geobacter... 467 e-130 UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromato... 466 e-130 UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 466 e-130 UniRef50_C7RNY7 Diguanylate cyclase/phosphodiesterase with PAS/P... 464 e-129 UniRef50_Q1JVV8 Diguanylate cyclase/phosphodiesterase with PAS/P... 463 e-129 UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/P... 462 e-129 UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/P... 462 e-129 UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=... 462 e-128 UniRef50_B9M6C9 Response regulator receiver modulated diguanylat... 461 e-128 UniRef50_Q2Y6N3 Response regulator receiver modulated diguanylat... 461 e-128 UniRef50_B8DLV2 Diguanylate cyclase/phosphodiesterase with PAS/P... 460 e-128 UniRef50_C4L753 Diguanylate cyclase/phosphodiesterase with PAS/P... 460 e-128 UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/P... 459 e-128 UniRef50_Q2BPG4 Sensory box/GGDEF family protein n=1 Tax=Neptuni... 459 e-127 UniRef50_Q3A0D5 Diguanylate cyclase/phosphodiesterase with PAS/P... 458 e-127 UniRef50_A6W3B3 Diguanylate cyclase/phosphodiesterase with PAS/P... 457 e-127 UniRef50_A1SSA6 Diguanylate cyclase/phosphodiesterase with PAS/P... 455 e-126 UniRef50_Q1K210 Diguanylate cyclase/phosphodiesterase with PAS/P... 455 e-126 UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/P... 455 e-126 UniRef50_B5ED91 Diguanylate cyclase/phosphodiesterase n=3 Tax=Ge... 454 e-126 UniRef50_C5V5K2 Diguanylate cyclase/phosphodiesterase with PAS/P... 453 e-126 UniRef50_C6P3H6 Diguanylate cyclase/phosphodiesterase with PAS/P... 453 e-126 UniRef50_C6NZE4 Diguanylate cyclase/phosphodiesterase with PAS/P... 453 e-126 UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus ... 453 e-126 UniRef50_A4BQ25 Putative diguanylate cyclase/phosphodiesterase (... 453 e-126 UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio... 452 e-126 >UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Firmicutes RepID=A4J477_DESRM Length = 947 Score = 528 bits (1361), Expect = e-148, Method: Composition-based stats. Identities = 73/417 (17%), Positives = 152/417 (36%), Gaps = 43/417 (10%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHY 72 ++ ++ A+R + ++ + HF ++ + ++ +K I + + R Sbjct: 532 DRLSMALNQAHRNK---NKLAVMFLDLDHFKKVNDTLGHDIGDQLLKGIAQRFSKLLRKG 588 Query: 73 NIVE---------LLCDYAPARRFGKAGMELFD----------LRLHERDDVLQAVFDKG 113 + + LL + A ++ D H + A++ Sbjct: 589 DTIARIGGDEFTILLHNITRAENASIVADKIIDTLANPWIIGNHEFHITTSIGIALYPDD 648 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 + + + ++ + ++ L EL++ Sbjct: 649 GTDAESLLKNADAAMYQAKEMGRNNYQFYTPTMNAQTLR-----RFELENNLRRALDRKE 703 Query: 174 F--AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAF 226 F + P V+ + +I+ EA+++ SP+ + G I A Sbjct: 704 FVIYYQPQVEIHTGKIVGVEALIRWQHPQRGMISPAEFIPMAEETGLIIPIGEWILRRAC 763 Query: 227 TM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVIS 283 +++NL + +P ++ N ++ L P+ + +E TES + Sbjct: 764 AQNKAWQDRGFSPMRVTVNLSARQFL-QPHLPQYISNVLEDTGLGPQWLELEITESLAMK 822 Query: 284 RFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQA 343 + + L+ GI++AID FG G++ L L R D +KI + I +++ A Sbjct: 823 DVAFTEKTLIELRKMGITLAIDDFGTGYSSLNYLKRLPIDILKIDRSFIHDLNTESDDVA 882 Query: 344 IIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWP 400 II AII +L+++V A GV T E+ M+L ++ QG LF K + Sbjct: 883 IISAIITLGHNLKMKVVAEGVETKEQLMFLRQQQCDLMQGYLFTKPLPVRELEQKYL 939 >UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteobacteria RepID=A6SVJ0_JANMA Length = 956 Score = 526 bits (1355), Expect = e-148, Method: Composition-based stats. Identities = 78/434 (17%), Positives = 149/434 (34%), Gaps = 44/434 (10%) Query: 2 LTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EE 56 LT L RS +RD ++ + +S A+R N I + F + + + Sbjct: 524 LTGLANRSLLRD-----RLSQAISYAHRYNHPI---WIAFVDLDRFKFVNDTLGHQAGDL 575 Query: 57 QVKMIYRAICQDPRHYNIVELLC-------------------DYAPARRFGKAGMELFDL 97 +K I + R + V + + + Sbjct: 576 LLKAIAERLQHAVRDTDTVSRMGGDEFVLILPERVDAGLSTGIVQRIMDGIAQPLTIEGH 635 Query: 98 RLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGS 157 + AV+ + + +R ++ + L Sbjct: 636 EFFISSSIGVAVYPNDGVTPEELIKHADIAMYRAKETGRNNFQFYTSSMNERALERLR-L 694 Query: 158 DKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDG 212 + +L + + P +D + +I+ EA+++ P + G Sbjct: 695 EGDLRNAMERGEFI--LHYQPQLDLRTGKIVGVEALIRWQHPELGMIPPMRFIGLAEETG 752 Query: 213 EIYTADLKSKALAFTM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVP 269 I A LG +S+NL + D + + ++ L P Sbjct: 753 LIVPIGAWVIREACRQNKVWQEHGLGSLRMSVNLSARQFAQQ-DLLESIALALEETQLPP 811 Query: 270 EQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQ 329 + + +E TES V++ D ++ LKA G+ ++ID FG G++ L L RF D +KI + Sbjct: 812 QCLEIELTESLVMADVDHAIGILRELKALGVQLSIDDFGTGYSSLSYLKRFPIDVLKIDR 871 Query: 330 ELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 + ++ AI+ +II SL + V A GV T E+ +L+ + QG F++ Sbjct: 872 SFVNDITTDPDDAAIVASIISLAHSLRLTVIAEGVETEEQLAYLQQHDCDQIQGYFFSRP 931 Query: 390 KLNGIPSIAWPEKK 403 + + K Sbjct: 932 ITADAMEVMLKDDK 945 >UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q39R25_GEOMG Length = 905 Score = 507 bits (1306), Expect = e-142, Method: Composition-based stats. Identities = 73/439 (16%), Positives = 147/439 (33%), Gaps = 45/439 (10%) Query: 4 TLIYRSHIRDDEPVKK---IEEMVSIAN--RRNMQSDVTGILLFNGSHFFQLLEGP---- 54 L+Y++ + +++ + A + + ++ + +F ++ + Sbjct: 455 QLVYQATHDPLTGLPNRNLLQDRLGQALALEAFRRRNPICVMFLDLDNFKKVNDTLGHTV 514 Query: 55 -EEQVKMIYRAICQDPRHYNIVELL----------------CDYAPARRFGK---AGMEL 94 + +K + + R + V L A++ A + L Sbjct: 515 GDMLLKAVANRLKNCLRGGDTVARLGGDEYIIVLPNVREVPDVITVAKKMINVFAAPLLL 574 Query: 95 FDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIA 154 ++ + A+F + + ++ I Sbjct: 575 MGNEIYVTASIGIALFPTDGETVDALLKNADAAMYHAKEQGKNNYQFYSAEMN-----IR 629 Query: 155 DGSDKELDSCALSPTINDHF--AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVG 207 L++ N F + P VD + RI EA+V+ N SP+ Sbjct: 630 VFERLSLETSLHRAVKNQEFLLHYQPRVDLRNGRICGVEALVRWNHPEMGLVSPAKFIPL 689 Query: 208 QRKDGEIYTADLKSKALAFTM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKA 264 + G I A L +++NL + + ++ + + Sbjct: 690 AEETGLIVPMGEWVLRTACAQNKAWQDAGLPPLRMAVNLSARQF-RQENLIAMVEEILME 748 Query: 265 NALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDR 324 L P+ + +E TES V+ ++ A ++ L GI VAID FG G++ L L RF Sbjct: 749 TGLAPQWLELELTESLVMQEAEKSAAILRELTDRGIEVAIDDFGTGYSSLSYLKRFPIAN 808 Query: 325 IKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGD 384 +KI Q I ++ + +++ II L ++ A GV E+ +L E QG Sbjct: 809 LKIDQAFIRDMTRDPDDATLVKTIITMAHGLGMKTIAEGVELAEQIDFLCRHQCEEMQGY 868 Query: 385 LFAKAKLNGIPSIAWPEKK 403 F++ + K Sbjct: 869 YFSRPITAEELGRLLADGK 887 >UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9LZ98_GEOSF Length = 912 Score = 505 bits (1301), Expect = e-141, Method: Composition-based stats. Identities = 78/433 (18%), Positives = 154/433 (35%), Gaps = 48/433 (11%) Query: 2 LTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EE 56 LT L RS ++D ++ + + A R N + I+ + F + + + Sbjct: 487 LTGLPNRSLLQD-----RLGQGIVQAVRDNRKV---AIMFLDLDRFKSINDTLGHVAGDS 538 Query: 57 QVKMIYRAICQDPRHYNIVELLC-----------------DYAPARRFGKA--GMELFDL 97 + + + + R + V + + + + L D Sbjct: 539 LLATVAERLTECVRETDTVARIGGDEFVIIISAIEHAEDLNKIAEKILAAISKPLVLNDQ 598 Query: 98 RLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGS 157 + + A++ + + Q + L ++ YF L Sbjct: 599 EIFITASIGIAIYPEDGTDVQGLLKNADLAMYKAKDQGKNAFQYFSREMNVQALEHLI-- 656 Query: 158 DKELDSCALSPTINDHFA--FHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRK 210 L++ + F + P +D S R++ EA+++ PS + Sbjct: 657 ---LENSLRRALERNEFVIFYQPQMDLKSGRLVGMEALIRWQHPDLGLLPPSRFIPMAEE 713 Query: 211 DGEIYTADLKSKALAF---TMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANAL 267 G I + A +++NL + + + + +K L Sbjct: 714 TGLILPIGEWALQTACAKNRAWMDAGFMPLRVAVNLCGIQF-RQKKFIELIEAVLKKTGL 772 Query: 268 VPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKI 327 P Q+ +E TES ++S+ +E + LK G+S+AID FG G++ L L F +R+KI Sbjct: 773 APSQLELELTESMLMSKAEESTTVLHKLKEMGVSLAIDDFGTGYSSLSYLKNFPINRVKI 832 Query: 328 SQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFA 387 + I +V + AI+ AII +L ++V+A GV + +L + QG L + Sbjct: 833 DRSFIRDVPNNPDDTAIVSAIIAMAHNLNLKVTAEGVENHSQLEFLSTRNCNEIQGYLLS 892 Query: 388 KAKLNGIPSIAWP 400 + Sbjct: 893 SPLPEAEFTRFLR 905 >UniRef50_C6MMM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. M18 RepID=C6MMM5_9DELT Length = 1097 Score = 502 bits (1294), Expect = e-141, Method: Composition-based stats. Identities = 78/418 (18%), Positives = 152/418 (36%), Gaps = 39/418 (9%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHY 72 +I + ++ A R Q T + + HF + + ++ +++ R + + R Sbjct: 546 DRIGQALTYAERYQRQ---TAVFFIDLDHFKFINDSLGHDMGDKLLQIAARRLSECVRSI 602 Query: 73 NIVE---------LLCDYAPARRFGKA----------GMELFDLRLHERDDVLQAVFDKG 113 + V +L D A + K ++ + L +++ K Sbjct: 603 DTVARHGGDEFVIVLSDLAVSEDAAKVARKIQDAVCRPYQIGEHELVVSCSTGISLYPKD 662 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 S Q+ + + +R ++ D L +K L H Sbjct: 663 GSDAQVLLKNADVAMYRAKQCGRNNFQFYTGDLNDIVL-ARLTMEKYLRRALERDEFLVH 721 Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTM 228 + P VD LS RI EA+V+ SP++ + G I A Sbjct: 722 --YQPKVDLLSGRITGMEALVRWQSPELGFISPASFIPLAEETGLIVAIGEWVLRTACAQ 779 Query: 229 ---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 L ++++NL P + D + + L P I +E ES ++ Sbjct: 780 NKAWQDDGLPPMVVAVNLSPRQF-RQEDLADTVHRIAEETGLAPRYIELEVVESLLMDDV 838 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 D + +LK G+ + +D FG G++ L L RF D +KI Q + ++ + AI+ Sbjct: 839 DGAVAMLDALKELGVQLTMDDFGTGYSSLSYLKRFPFDMMKIDQSFVRDITRDPGSAAIV 898 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEKK 403 + +I +L ++V A G+ T + +L + QG F++ +++ Sbjct: 899 RTVISLAHTLNLRVVAEGIETEGQLGYLRGLACDEMQGFYFSRPVPAAEFEQMLRDQR 956 >UniRef50_Q47ED8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47ED8_DECAR Length = 827 Score = 502 bits (1293), Expect = e-140, Method: Composition-based stats. Identities = 69/418 (16%), Positives = 144/418 (34%), Gaps = 39/418 (9%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHY 72 +++ + A R N + G+L + +F + + ++ ++ + + R Sbjct: 410 ERLSRAIGQARRHNKRV---GMLFLDLDYFKHINDSLGHAVGDQLLQQVAERLIVCIRDT 466 Query: 73 N---------IVELLCDYAPARRFGKAGMEL----------FDLRLHERDDVLQAVFDKG 113 + V LL + AR +L LH + +++ Sbjct: 467 DTVCRQGGDEFVILLAEIEQARDAAPIAEKLLAAFAEPCLIAGNELHVSLSIGISIYPDD 526 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 + + +F + + L Sbjct: 527 GMDADTVMKNADTAMYHAKANGRNNYQFFTTEMNTRAV-RRLFIEGNLRRALRQGEFM-- 583 Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTM 228 + P +D S +I EA+++ + P + G I A Sbjct: 584 LYYQPKIDLASGMMIGSEALIRWQDPEHGLVYPKQFVPIAEESGLIVPIGSWVLREACRQ 643 Query: 229 ---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 L +S+N+ + D + + +K ++P + +E TES ++ Sbjct: 644 VRAWQESGLVAVPVSVNISAVEF-RHKDFLEGVALILKETGMLPSYLELELTESILMHDA 702 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 + A +++LK G+ +AID FG G++ L L RF + +KI Q + ++ +I+ Sbjct: 703 ESSATVLEALKTMGMQLAIDDFGTGYSSLSYLKRFPINTLKIDQSFVHDIAIDPDDASIV 762 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEKK 403 A+I +L+ +V A GV T E+ +L + + QG LF + + + Sbjct: 763 GAMIGMGKNLKQRVVAEGVETEEQLAFLRTLHCDEGQGFLFGRPLPADEFARLLLNDR 820 >UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxalobacteraceae RepID=A6T0F0_JANMA Length = 699 Score = 501 bits (1290), Expect = e-140, Method: Composition-based stats. Identities = 79/417 (18%), Positives = 145/417 (34%), Gaps = 41/417 (9%) Query: 20 IEEMVSIANRRNMQSDV-TGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHYN 73 + + + A + + T I + F + + +E +K+ + + R + Sbjct: 289 LYDRMQQAVLHSERYGKLTAIAFLDLDQFKFINDSLGHQVGDELLKITAQRLTSCLRESD 348 Query: 74 IVE---------LLCDYAPARRFGKAGMELF----------DLRLHERDDVLQAVFDKGT 114 V LL D + DL + + Sbjct: 349 TVARQGGDEFVLLLTDQPNEEAITHTMQRVLHEVSQPWKANDLEFQITCSIGLTLCPDDG 408 Query: 115 SKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF 174 + + ++ L YF S EL + N+ F Sbjct: 409 RDAETLLKNADSAMYKAKELGRNNFQYFSAEMNSS-----VTDRLELLNRLRQAITNEDF 463 Query: 175 --AFHPIVDPLSRRIIAFEAIVQKNE-----DSPSAIAVGQRKDGEIYTADLKSKALAFT 227 + P V S +II EA+V+ N SP++ + G I A Sbjct: 464 VLHYQPKVSLASHQIIGAEALVRWNSAHSGMVSPASFIPLAEETGLIIPLGEWVLRTACR 523 Query: 228 M---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISR 284 IS+NL P L D V + + L + + +E TES + + Sbjct: 524 QNRAWQDAGYPPIPISVNLSPRQLAR-GDIVEVVERILTETGLEAQHLELEITESVMTTD 582 Query: 285 FDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAI 344 ++ + L++ G+ +++D FG G++ L L RF D +KI Q + ++ AI Sbjct: 583 VEKSFALLTQLRSLGVKISLDDFGTGYSSLSYLKRFPVDTLKIDQSFVRDIATDQDSAAI 642 Query: 345 IQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPE 401 ++AII +L + V A G+ T +++ +L + G + QG L +K N + Sbjct: 643 VKAIISLGRNLNLTVLAEGIETEDQFQFLLANGCDEGQGYLMSKPVPNKNFVDLLTQ 699 >UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultured bacterium RepID=Q20JY5_9BACT Length = 874 Score = 500 bits (1288), Expect = e-140, Method: Composition-based stats. Identities = 80/433 (18%), Positives = 153/433 (35%), Gaps = 42/433 (9%) Query: 1 MLTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----E 55 +LT L+ R + I +RR ++ + + F + + + Sbjct: 444 VLTGLLNRKSFYTRLEDELIRSYSYDGDRRRIKGHKWALFFLDVDRFKYVNDTLGHDVGD 503 Query: 56 EQVKMIYRAICQDPRHYN-------------IVELLCDYAPA------RRFGKAGMELFD 96 E +K++ + R + + +L D A R+ + D Sbjct: 504 ELLKVVAVRLKNCLRKSDYIFRLGGDEFTIILNDLTDDTDMAKVAQKIRKAIARPCRIKD 563 Query: 97 LRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADG 156 L+ + +++ + + + + +F L Sbjct: 564 HELYITVSIGISIYPDDGDDVETLVKNADIAMYAAKEENQG-YRFFIEEMNRKTL----- 617 Query: 157 SDKELDSCALSPTINDHF--AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQR 209 L++ + +D + P+VD + +I+ EA+++ + SPS Sbjct: 618 ERMMLENNLRNALQHDQLIIYYQPLVD-STNQIVGMEALLRWHHPELGLISPSQFIPLAE 676 Query: 210 KDGEIYTADLKSKALAFTMAHAL---ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANA 266 + G I A A +++NL EPD V + ++A Sbjct: 677 ETGLIVPIGKWVLRCACQQARKWHEMGYTRFYVAVNLSVRQF-REPDLVETIEQILEATD 735 Query: 267 LVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIK 326 L P+ + +E TES ++ ++ +K L+A GI +ID FG G++ L L RF D +K Sbjct: 736 LPPDCLKLEVTESGIMEHPEQAIAKMKMLRAKGIHFSIDDFGTGYSSLSYLKRFPIDTLK 795 Query: 327 ISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLF 386 I + + + + Q II+ II +L + A GV E+ +L G M QG F Sbjct: 796 IDRSFVIDSTTNKDDQEIIKTIIAMARNLGMDTVAEGVEAKEQQDFLIHHGCHMMQGYYF 855 Query: 387 AKAKLNGIPSIAW 399 + Sbjct: 856 GRPMPAEKFEDML 868 >UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammaproteobacteria RepID=B3PCE8_CELJU Length = 772 Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats. Identities = 63/413 (15%), Positives = 135/413 (32%), Gaps = 40/413 (9%) Query: 21 EEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHYNIV 75 + + R + ++L + F + + + +K I + + R + V Sbjct: 344 DRIYHGLARARRSNSRVALMLLDIDRFKIVNDSLGHDAGDILLKAIAMRLTEGVRDMDTV 403 Query: 76 ELLC-----------------DYAPARRFGKAGMELF--DLRLHERDDVLQAVFDKGTSK 116 L + + L + + ++F + + Sbjct: 404 ARLGGDEFVVVLEGIHDVDDVIFVANKLLATLSRPLDISGHSISATVSIGVSIFPEDGAD 463 Query: 117 FQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF-- 174 + + ++ ++ + + L++ + Sbjct: 464 TDELLKNADIAMYKAKEAGKNNCQFYTKGMNATAVNYLL-----LENDLRRAIEQNQLAL 518 Query: 175 AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTM- 228 + P +D + + EA+V+ SP+ + G I A Sbjct: 519 YYQPQIDLKTGDMTGVEALVRWQHPERGLVSPAHFIPLAEETGLIVPIGEWVLREACKQK 578 Query: 229 --AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFD 286 +++NL P + + + ++ L + + +E TES + Sbjct: 579 KIWLDTGKNVGKVAVNLSPRQF-RQKNFPGKVEAILQETGLEAKYLELEITESCAMEHAG 637 Query: 287 EFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQ 346 E + L G +AID FG G++ L L RF ++KI + I ++H AI + Sbjct: 638 ETINQLNQLNQMGTFLAIDDFGTGYSSLAYLQRFPIQKLKIDRSFIHDIHDDANDAAIAK 697 Query: 347 AIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAW 399 II +++++V A GV T + WL + G + QG L+AK + Sbjct: 698 TIIGLAHNMQLRVVAEGVETESQAEWLRAKGCDQVQGFLYAKPMTAKQLESHF 750 >UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=B3EBJ5_GEOLS Length = 965 Score = 497 bits (1280), Expect = e-139, Method: Composition-based stats. Identities = 58/416 (13%), Positives = 134/416 (32%), Gaps = 39/416 (9%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHY 72 +++ ++ A R + IL + F + + ++ ++++ + R Sbjct: 543 DRLQLAINRAERDSQGV---AILFLDLDRFKAINDSLGHAMGDQLLRLVGNRLLDCVRSS 599 Query: 73 NIVELL-------------------CDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKG 113 + V L ++ D ++ + ++F + Sbjct: 600 DTVARLGGDEFVVLISALDNDHAVGSVVMKILEQLCEPYQIDDHEVYTSSSIGISLFPRD 659 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 + + + ++ +F + + Sbjct: 660 GRDAEELLKNADMAMYQAKEAGRNTCHFFSPELNMRA-TERLLLESTMRRALER--EEFF 716 Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTM 228 + P ++ S I EA+++ P+ + G I A A Sbjct: 717 LVYQPQMELRSGHIAGIEALLRWRHPDLGVVPPNNFIPIAEETGLIVPLGEWVLAEACRQ 776 Query: 229 ---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 +++N+ + + + + L P + +E TES V+ Sbjct: 777 AVRWQQEGQPPLRMAVNVSARQF-RQRNLGLRIEKILMETGLDPALLELELTESAVMENP 835 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 +E ++ LK GI+++ID FG G++ L L F DR+KI + + +V + I Sbjct: 836 EEAILTLRQLKKMGITLSIDDFGTGYSSLSHLKHFPIDRLKIDRSFVKHVTRDHNDATIA 895 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPE 401 +AII S+++ V A G+ E+ ++ + QG ++ Sbjct: 896 EAIIALAHSMKLTVVAEGIEHSEQMEFMHQRHCDTMQGYYLSRPVTAEEFGTFLKR 951 >UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZD9_9PROT Length = 1149 Score = 496 bits (1279), Expect = e-139, Method: Composition-based stats. Identities = 69/433 (15%), Positives = 147/433 (33%), Gaps = 44/433 (10%) Query: 2 LTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EE 56 LT L R+ + ++ + +S+A R Q V + + HF + + ++ Sbjct: 728 LTGLPNRTQLN-----ERFKYALSLAQRSGEQMTV---MFLDLDHFKDINDTLGHSIGDQ 779 Query: 57 QVKMIYRAICQDPRHYNIVEL------------------LCDYAPARRFGKAGMELFDLR 98 + + + + + R + V A + Sbjct: 780 LLMDVAKRLKETLRDEDTVSRQGGDEFILILPGTDENGAAHVAAKLMEAVSQAFQFEQHE 839 Query: 99 LHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSD 158 L + A++ F+ + +R +F + Sbjct: 840 LVATCSIGIAIYPHDGENFETLSKNADTAMYRVKHDGRNGFCFFTSEMQAHS-ARTLQLG 898 Query: 159 KELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGE 213 L + H + P + ++ EA+++ SP+ +G+ Sbjct: 899 NALRHALTRGQL--HLHYQPQISTQDGHVVGAEALLRWQHPELGSISPAEFIPIAEDNGQ 956 Query: 214 IYTADLKSKALAFTMAHAL---ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPE 270 I A L ++++NL + + + + + + + + Sbjct: 957 IIPIGEWVLRTAIKQLKDWMDSGLPPMIMAVNLSAAQF-RQSNLMELVTSILDESKVPHR 1015 Query: 271 QIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQE 330 + +E TE+ + + L GI ++ID FG G++ L L RF+ ++KI Q Sbjct: 1016 YLELELTEAVAMDDPQLAIGVMDKLHTGGIKMSIDDFGTGYSSLSYLKRFKVYKLKIDQS 1075 Query: 331 LITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 + ++ +AI+ AII +SL +Q A GV T + +L G QG F+K Sbjct: 1076 FVHDITDDPDDKAIVAAIINMASSLGMQTIAEGVETAGQLSFLRLQGCNEVQGYYFSKPL 1135 Query: 391 LNGIPSIAWPEKK 403 +++ +K+ Sbjct: 1136 PAEQF-VSYLQKQ 1147 >UniRef50_Q3A2X0 Motility repressor MorA n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A2X0_PELCD Length = 643 Score = 496 bits (1279), Expect = e-139, Method: Composition-based stats. Identities = 75/417 (17%), Positives = 146/417 (35%), Gaps = 40/417 (9%) Query: 19 KIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHYN 73 +++ ++ A+R + +L+ + F Q+ + +E + ++ + + + Sbjct: 210 DMDKALAKASRNT---AMVAVLMLDLDDFKQINDTTGHAKGDEMLLLLTSRLREQLGEKD 266 Query: 74 ---------IVELLCDYAPAR-----------RFGKAGMELFDLRLHERDDVLQAVFDKG 113 V +L + A +L ++ + A+F + Sbjct: 267 SLARLGGDEFVVVLNEIDSATCAAKKTEKILASLRDNPFDLVVAKVFASASIGIALFPQN 326 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 + + + + +F + + L Sbjct: 327 GRDAETLLKHADMAMYEAKNVGRNTYRFFSDELHRRTI-ERHKLEVGLRRAVRK--KEFF 383 Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAF-- 226 + P VD + RI+A EA+V+ PS + G I+ A Sbjct: 384 LVYQPQVDLGTGRIVALEALVRWQHPEAGVLLPSTFIPVAEETGLIHIMGEWILRTACHQ 443 Query: 227 -TMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 + L I++N +PD V + + + L P + +E TES + Sbjct: 444 AMQWQRMGLPPMRIAVNFSARQF-RQPDLVERIEQILLESGLPPHHLELEITESVFMENL 502 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 + E + LK I +AID FG G++ L L F DR+KI+Q+ + ++ II Sbjct: 503 ESAIETLVDLKTRAIQIAIDDFGTGYSSLNYLKNFPLDRLKIAQDFVRDIPDDEDDATII 562 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEK 402 + I+ L I+V A GV T E+ +L G QG FA+ + ++ Sbjct: 563 ETIMAMANRLGIKVLAEGVETMEQVTFLRRKGCHEMQGFYFARPMQAEEIAGFLNQR 619 >UniRef50_C5S5K8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S5K8_CHRVI Length = 1069 Score = 494 bits (1273), Expect = e-138, Method: Composition-based stats. Identities = 72/433 (16%), Positives = 150/433 (34%), Gaps = 48/433 (11%) Query: 10 HIRDDEPVKKI-------EEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQ 57 H+ +P+ + + R + Q +L + F + + + Sbjct: 636 HLVHYDPLTNLPNRRLVQSRLEHALERADRQGGRVAVLFVDLDRFKTVNDSLGHPSGDVL 695 Query: 58 VKMIYRAICQDPRHYN---------IVELLCDYAPARRFGKAGMELF-----------DL 97 ++++ R + + R + + LL + L Sbjct: 696 LELLARRLSERVREDDTLARLGGDEFLVLLENLQRPEDAAAVAESLLSLLQQPFHLPNGQ 755 Query: 98 RLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGS 157 L+ + +++ + ++ ++ + Sbjct: 756 ELYVGASIGISLYPDDGHTVTDLIQHADVAMYQAKEEGRNTYRFYTPSLTQTAR-----E 810 Query: 158 DKELDSCALSPTINDHF--AFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRK 210 L++ ++ F + +D R+I EA+V+ + + P + Sbjct: 811 RLGLEARLHRALASEEFVLHYQAQIDMRDGRLIGCEALVRWHSATEGLVAPDRFIPLAEE 870 Query: 211 DGEIYTADLKSKALAFTM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANAL 267 G I A A L D +++NL L PD V + ++ L Sbjct: 871 TGLIVPLGEWVLRQACADCQSWRARGLTDLTVAVNLSGRQL-RSPDLVERVTRVLRETGL 929 Query: 268 VPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKI 327 E++ +E TES ++ + ++ E +++LKA G+ ++ID FG G++ L L R D +KI Sbjct: 930 PAERLKLELTESMIMDQREQALERLRALKALGVRLSIDDFGTGYSSLAYLKRLPIDELKI 989 Query: 328 SQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFA 387 ++ + ++ + I II +L + V A GV TPE+ +L G QG LF Sbjct: 990 DRDFVRDIPEDSSDMEIAATIIAMARNLRLNVIAEGVETPEQCDFLIRQGCTAGQGYLFG 1049 Query: 388 KAKLNGIPSIAWP 400 + + Sbjct: 1050 RPLPAEAFAQVMR 1062 >UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Proteobacteria RepID=Q0AIX2_NITEC Length = 791 Score = 493 bits (1271), Expect = e-138, Method: Composition-based stats. Identities = 69/433 (15%), Positives = 146/433 (33%), Gaps = 44/433 (10%) Query: 9 SHIRDDEPVKKIEEMV------SIANRRNMQSDV-TGILLFNGSHFFQLLEGP-----EE 56 + + +P+ + + A R + G+L + F + + +E Sbjct: 357 AQLAHYDPLTGLPNRLLAQSQLHQAIERAQRHGRLVGVLYIDLDRFKNVNDSLGHPVGDE 416 Query: 57 QVKMIYRAICQDPRHYNIVELL------------CDYAPARRFGKAGMELF--------D 96 + + + + R + + L D ++ + L Sbjct: 417 LLIKLAERMKKRVREEDTLARLGGDEFLLVLEDVRDLGDPAFVAQSLINLLTSPFVLPSG 476 Query: 97 LRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADG 156 + + ++F + S + ++ + A Sbjct: 477 HEIFINASIGISLFPEDASNATELIQHSDMAMYQAKKEGRNTYR-YHTEALSVAANERLI 535 Query: 157 SDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKD 211 + L + + + P+VD + ++ EA+V+ P + Sbjct: 536 MENRLRYALSAEELI--LHYQPLVDARTGYVVGVEALVRWQPPGKAMVPPGKFIPIAEET 593 Query: 212 GEIYTADLKSKALAFTMAHAL---ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALV 268 G I A A A L ++++NL +E + V + ++ L Sbjct: 594 GLIVPLGEWVLRTACKQARAWIDAGLSPLVMAVNLSVRQFQSE-NLVGMVQRILEETQLP 652 Query: 269 PEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKIS 328 + + +E TES + ++ E + LK G+ +AID FG G++ L+ L RF D++KI Sbjct: 653 ADYLELELTESMFMEHVEQSIETLNKLKTLGVHLAIDDFGTGYSSLIYLKRFPIDKLKID 712 Query: 329 QELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 Q + ++ + I II L++ V A G+ + E+ +L + +QG LF + Sbjct: 713 QRFVRDLADDHNDREIAATIIAMARGLKLGVLAEGIESEEQLAFLRQQDCDYYQGYLFHR 772 Query: 389 AKLNGIPSIAWPE 401 E Sbjct: 773 PVPAIELEAWLRE 785 >UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4K8_AZOSE Length = 698 Score = 493 bits (1271), Expect = e-138, Method: Composition-based stats. Identities = 75/408 (18%), Positives = 141/408 (34%), Gaps = 37/408 (9%) Query: 20 IEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEG-----PEEQVKMIYRAICQDPRHYNI 74 + + ++ A R+ +T ++ + F + + + ++ + + R + Sbjct: 285 LNDRITHAIARSRGR-LTAVMFLDLDRFKLVNDSYGHAVGDALIREVANRVSACLRAGDT 343 Query: 75 VELL-------------------CDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKGTS 115 V L A R + + L L + A+ + Sbjct: 344 VARLGGDEFVVLLEDLASIEDAARLAAKLRDRLSESVRIGSLELPLSASIGVALAPRDGR 403 Query: 116 KFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFA 175 ++ + + +R ++ + + EL + H Sbjct: 404 DPEMLLKNADIAMYRAKERGRNNYCFYGPEMDHHAR-RRLTVESELRRALAGGELEAH-- 460 Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTM-- 228 + P VD + + EA+V+ P + G I + A Sbjct: 461 YQPQVDLATGALTGAEALVRWRHPERCLLLPGEFIAVAEETGLIVPLGEQVLRAACRQST 520 Query: 229 -AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDE 287 D +++NL + D V + + + Q+ +E TES ++ D Sbjct: 521 RWREAGRPDLKVAVNLSGHQF-RQHDLVEQVCDILAETGAHAAQLELEITESVAMADADG 579 Query: 288 FAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQA 347 + L+ GI++AID FG G++ L L RF D +KI + I + G AI+QA Sbjct: 580 SVATLAGLRRQGIALAIDDFGTGYSSLSYLKRFPIDTLKIDRSFIQGIPADGDDTAIVQA 639 Query: 348 IIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIP 395 II SL + + A GV TP + +L + G QG LF +A Sbjct: 640 IIAMARSLRLSLLAEGVETPAQREFLVAQGCRSGQGFLFGRAMPAEDF 687 >UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAD3_METSD Length = 751 Score = 492 bits (1269), Expect = e-138, Method: Composition-based stats. Identities = 76/416 (18%), Positives = 152/416 (36%), Gaps = 43/416 (10%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHY 72 ++ + ++IA R ++ + HF + + ++ +KM+ R + R Sbjct: 338 DRLNQALTIARRDQE---FIALMFLDLDHFKNINDSLGHEVGDQLLKMVARRLESCLRAS 394 Query: 73 NIV-------------ELLCDYAPAR------RFGKAGMELFDLRLHERDDVLQAVFDKG 113 + + EL ++PA E+ + + AVF Sbjct: 395 DTISRQGGDEFMILLPELTNYFSPAEVAEKLLAAATVPYEIGSHEITVSASIGIAVFPDD 454 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 +L + + L +F + + IA EL+S + Sbjct: 455 GENGELLTKNADAAMYHAKSLGRNNYQFFTRAMNERVMEIA-----ELESKLRRAVERNE 509 Query: 174 F--AFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAF 226 F + P +D + +++ EA+++ S P G I L A Sbjct: 510 FVLYYQPKIDIRTGQVVGAEALIRWQHPSWGLVAPDRFIPIAEDSGLIRPIGLWVMREAC 569 Query: 227 TM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVIS 283 A L +++NL + L + + + + + + L P+ + +E TES I Sbjct: 570 RQNQEWQAAGLARIPVAVNLSTVQL-RQHNFLQEVSEILLMSGLEPDYLELEVTESVAIH 628 Query: 284 RFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQA 343 E + L++ G+ +A+D FG G++ L L R + +KI + I ++ Sbjct: 629 AETEVINWLHKLRSMGVKLALDDFGTGYSSLSYLKRLPINNVKIDKSFIRDIETDPDDAT 688 Query: 344 IIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAW 399 II AII+ L + V A GV + +L+ G + QG + ++ ++ Sbjct: 689 IITAIIRMSHGLRLNVIAEGVENINQLEFLKKEGCDQMQGFIASRPVPADEFALLL 744 >UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=Q39X25_GEOMG Length = 633 Score = 492 bits (1269), Expect = e-138, Method: Composition-based stats. Identities = 67/417 (16%), Positives = 133/417 (31%), Gaps = 44/417 (10%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAIC-QDPRH 71 ++ + +++A R V + + F + + + + + + + R Sbjct: 212 DRLRQSLALAQRHKRPLAV---MFLDLDRFKLINDTLGHAVGDRLLMAVAKRLRNCCRRE 268 Query: 72 YNIV------ELLCDYAPARRFGKA-------------GMELFDLRLHERDDVLQAVFDK 112 + V E + + + A + L + +V+ Sbjct: 269 GDTVARQGGDEFIINLSAISDVKDAFTVAQKIIDVFRTPFVIDGYELFITTSIGISVYPH 328 Query: 113 GTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTIND 172 + + +R F L++ D Sbjct: 329 DGRSGDALVKNADVAMYRAKEQGRNNCQLFAPEMNARAF-----ERLSLENDMRRALERD 383 Query: 173 HF--AFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALA 225 F + P V+ +I EA+V+ S PS + G I A Sbjct: 384 EFVLHYQPKVNVEHGQIACMEALVRWQHPSMGLVPPSRFIPLAEETGLIVPLGEWVLRTA 443 Query: 226 FTM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVI 282 +++NL P L + D + + L P +++E TES ++ Sbjct: 444 CQQNRAWQDAGYPTMQVAVNLSPRQL-RQGDLSETVARVLAETGLAPGWLVIEVTESILM 502 Query: 283 SRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQ 342 +E + L G+ ++ID FG G++ L L +F +KI + + + + + Sbjct: 503 DDAEETIRTFRRLDRMGVRISIDDFGTGYSSLHYLKKFPVHTLKIDRSFVREIASNPDDE 562 Query: 343 AIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAW 399 AI A+I L + V A GV T E+ L + QG LF++ + Sbjct: 563 AIAGAVISMAKGLNLGVVAEGVETVEQMEVLRALNCRYMQGFLFSEPAPAEQFTPVL 619 >UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Clostridium thermocellum RepID=A3DCG7_CLOTH Length = 862 Score = 491 bits (1266), Expect = e-137, Method: Composition-based stats. Identities = 71/420 (16%), Positives = 146/420 (34%), Gaps = 43/420 (10%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHY 72 +++ ++ + R N + +++ + +F + + + +K + I R Sbjct: 442 DRLKMALAQSKRNNE---MCALIILDLDNFKAINDTLGHSVGDMLLKQVAEKIKGYLREV 498 Query: 73 NIVELL------------CDYAPARRFG-------KAGMELFDLRLHERDDVLQAVFDKG 113 + V + D A R + L + + ++ G Sbjct: 499 DTVARIGGDEFIIIQPQIKDINDATRAADRILKKFQQPWILEGKEYYITASMGIGIYPNG 558 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 Q + + +R L + L ++++ + Sbjct: 559 GEDPQTIFKNADTALYRAKELGRNNYQLYTESMNQKVLQ-----RLDIENSLRRAIEKEE 613 Query: 174 FA--FHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAF 226 F + P +D + +I+ FEA+++ P G I A Sbjct: 614 FVLFYQPQIDIKTGKIVGFEALLRWYHPDYGLMPPMEFIPVAEDSGLIVVIGEWVLETAC 673 Query: 227 TMAHAL---ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVIS 283 L +IS+NL + V + + L PE + +E TES + Sbjct: 674 RQNKKWIECGLEPHLISVNLSARQFQR-SNIVEVIDRIRSSTGLAPELLELEITESTAMQ 732 Query: 284 RFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQA 343 + + L+ GI V++D FG G++ L L + D +KI + + ++ + +A Sbjct: 733 DLSFTIDVLNQLRKKGIRVSLDDFGTGYSSLNYLRQLPIDTLKIDKSFVQDIRANSKEEA 792 Query: 344 IIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEKK 403 I + +I L++ V A GV T E+ ++L+ + QG LF+K +KK Sbjct: 793 IAKTVISLAHKLDLTVVAEGVETKEQLLFLKKEKCDKAQGYLFSKPLPAEEIEKMLRDKK 852 >UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G4R7_HERAR Length = 859 Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats. Identities = 69/413 (16%), Positives = 137/413 (33%), Gaps = 36/413 (8%) Query: 20 IEEMVSIANR-RNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHYN 73 ++E A R ++ + HF + + + + + + + R + Sbjct: 446 LDERAQRALRLAEEDQATLAVMFLDLDHFKNINDTLGHNLGDTLLVELAQRLRAVLRRDD 505 Query: 74 IVE-------LLCDYAPAR-----------RFGKAGMELFDLRLHERDDVLQAVFDKGTS 115 + +L R R + L+ + AV+ Sbjct: 506 TLSRLGGDEFVLLLPGANRESAKKIAQELMRAINEPYRIGSHELNVMASIGIAVYPADGM 565 Query: 116 KFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFA 175 F+ + + +R F + L H Sbjct: 566 DFETLCKNADVAMYRAKQEGRNAYRSFTQEMQAYSTRYLQVL-NALRQAI--AQEQLHVH 622 Query: 176 FHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTM-- 228 + P + +S +I EA+++ + SP+ + G I +A Sbjct: 623 YQPQISLISGDVIGAEALLRWHHPELGNISPAEFIPIAEESGLILQIGEWVLRVAVAQAK 682 Query: 229 -AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDE 287 H L L +I++NL + + ++ +K P+ + +E TE + Sbjct: 683 KWHQLGLDKLIIAVNLSAVQF-RHAGLPNLVMQILKEEDFPPQYLELELTEGVAMHDPQG 741 Query: 288 FAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQA 347 + SL G+ ++ID FG G++ L L +F+ ++KI Q + ++ +AI+ A Sbjct: 742 AIAMMNSLHERGVRMSIDDFGTGYSSLSYLKQFKAYKLKIDQSFVRDISTDAEDKAIVSA 801 Query: 348 IIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWP 400 II +L +Q A GV T E+ +L G QG ++K Sbjct: 802 IIGMAKNLGLQTIAEGVETAEQQAFLREEGCHEAQGYHYSKPLPAADFETFIL 854 >UniRef50_C6ME82 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6ME82_9PROT Length = 1136 Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats. Identities = 68/435 (15%), Positives = 148/435 (34%), Gaps = 44/435 (10%) Query: 9 SHIRDDEPVKKI------EEMVSIANRRNMQSD-VTGILLFNGSHFFQLLEGP-----EE 56 +H+ + + + + + A R ++ L + F + + +E Sbjct: 689 AHLAHYDALTGLPNRLLVQSRLHHAIERTLRHGNQIAALYLDLDRFKNVNDSLGHPIGDE 748 Query: 57 QVKMIYRAICQDPRHYN---------IVELLCDYAPARRFGKAGMELFD----------- 96 + M+ + + R + + +L D + L D Sbjct: 749 LLVMLALRLKKRLREEDTLARLGGDEFLVVLEDIKDSNEPAMVAQTLIDLLATPFSLPSG 808 Query: 97 LRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADG 156 + + ++F + + + Y + Sbjct: 809 HEIFINTSIGISLFPTDANSVTELIQHADMAMYLAKQEGRNTYRYHTDALSIAA-NERLV 867 Query: 157 SDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKD 211 + +L + + P++D +++ EA+V+ SP + Sbjct: 868 LETQLRQALSAGEFV--LHYQPLIDARKGQVMGVEALVRWQPPDKAMVSPGKFIPIAEET 925 Query: 212 GEIYTADLKSKALAFTM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALV 268 G I A + ++++NL +E + V + ++ L Sbjct: 926 GLIVPLGEWVLRTACAQGRAWMDADFPPLVMAVNLSVRQFQSE-NLVELIRQVLEETKLP 984 Query: 269 PEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKIS 328 + +E TES + ++ E +K+LK+ G+ ++ID FG G++ L L RF D++KI Sbjct: 985 AACLELELTESMFMEHAEQSIEILKTLKSLGVRLSIDDFGTGYSSLTYLKRFPIDKLKID 1044 Query: 329 QELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 Q + + + I II +L++ V A GV + ++ L G + +QG LF + Sbjct: 1045 QSFVHGLAYDPNDREIAATIIAMARNLKLDVLAEGVESEQQLDILNQHGCDYYQGYLFHR 1104 Query: 389 AKLNGIPSIAWPEKK 403 + + E K Sbjct: 1105 PVPAQELEVWFRENK 1119 >UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3I2_DESAC Length = 791 Score = 491 bits (1264), Expect = e-137, Method: Composition-based stats. Identities = 74/425 (17%), Positives = 151/425 (35%), Gaps = 41/425 (9%) Query: 10 HIRDDEPVKKIEEMVSIANRRNMQSDV-TGILLFNGSHFFQLLEGP-----EEQVKMIYR 63 + + + + A + +S T +L + F + + ++ ++ + + Sbjct: 364 QLTHLPNKELFFDRLERATFKTHRSPFFTALLFIDLDRFKHINDSLGHEIGDQLLQEVAK 423 Query: 64 AICQDPRH----------------YNIVELLCDYAPARRFGKA---GMELFDLRLHERDD 104 + R +I EL A+ F + L Sbjct: 424 RLSTSIRKTDTLARMGGDEFLIIIEDIKELSHVSTVAKNFIDTILPSFTIDGHELFITPS 483 Query: 105 VLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSC 164 + ++ T + + ++ L + ++ + EL+S Sbjct: 484 MGISIAPTDTQHPKELLAFAEIAMYQAKGLGGNKCQFYTAEMNSRA-----KTRIELESY 538 Query: 165 ALSPTINDHF--AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTA 217 D F + P D S ++ EA+++ SP+ + G I Sbjct: 539 LRKAVNQDQFVLYYQPQFDIQSGELVGCEALLRWQHPQMGMISPNDFIPLAEETGVIIEI 598 Query: 218 DLKSKALAFTM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIV 274 A +++N+ P EP + + ++ + PE + + Sbjct: 599 GEWVLQEACLQNKKWQDAGHSPIRVAVNISPRQF-REPGFLEMIERVVQTTGIKPEWLEL 657 Query: 275 EFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITN 334 E TES ++ D +K LKA GI +AID FG G++ L L RF R+KI + + + Sbjct: 658 EITESLLMDDIDSAINILKQLKAKGIHLAIDDFGTGYSSLSYLKRFPLSRLKIDRSFVRD 717 Query: 335 VHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGI 394 + +I +A+I S+ ++V A G+ T E+ ++L+ G E+ QG L++ Sbjct: 718 ITTDDNDASITKAVIALAHSMNLKVVAEGIETQEQLLFLKEKGCEVGQGYLYSPPVAKEP 777 Query: 395 PSIAW 399 + Sbjct: 778 FDHFF 782 >UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXC9_DESAC Length = 888 Score = 491 bits (1264), Expect = e-137, Method: Composition-based stats. Identities = 74/438 (16%), Positives = 147/438 (33%), Gaps = 43/438 (9%) Query: 2 LTTLIYRSHIR--DDEPVKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP----- 54 L L+Y + + + + + + + ++ G+L + HF ++ + Sbjct: 456 LEYLVYHDVLTDLPNRQLFR-DRLQHAISMASLGQHQVGVLFIDLDHFKKINDSLGHEVG 514 Query: 55 EEQVKMIYRAICQDPRHYNIVELLC-------------------DYAPARRFGKAGMELF 95 + + + R + + V L R M + Sbjct: 515 DRLLCEVARRLRLCIGGLDTVARLSGDEFAIILDQLNNIENVILIAQEVNRRLAEMMVVE 574 Query: 96 DLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIAD 155 +L + +++ F+ L + ++ + + Sbjct: 575 GYKLFLTASIGISLYPGDGKDVVSLLKCADAAMFKAKELGRDNYRFYTAGLNERASELL- 633 Query: 156 GSDKELDSCALSPTINDHF--AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQ 208 L+ +H F P V+ SRRII EA+V+ SP Sbjct: 634 ----ALEGALRQAVDKNHLVVYFQPQVELASRRIIGAEALVRWQHPENGMISPVDFIPMA 689 Query: 209 RKDGEIYTADLKSK---ALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKAN 265 + G I + L IS+N+ + D V + ++ Sbjct: 690 EETGLIVSIGEWVLRQSCLQARQWQVAGYPPMRISVNMSARQF-RQKDLVPMVRRILQET 748 Query: 266 ALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRI 325 L PE + +E TES +++ D E + L + GI ++ID FG G++ L L +F + Sbjct: 749 GLSPEYLDLEITESILMNDVDGAVERLVELHSLGIQLSIDDFGTGYSSLAYLKKFPIQYL 808 Query: 326 KISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDL 385 KI + + +V AI A+I ++ + V A G+ ++ +L G QG L Sbjct: 809 KIDRSFVRDVIIDPNDAAIATAVIDLARNMNLNVIAEGIEQQDQHQFLLDRGCGYGQGYL 868 Query: 386 FAKAKLNGIPSIAWPEKK 403 F++ ++ Sbjct: 869 FSRPIPAHEFEQLLVRQQ 886 >UniRef50_C1DB08 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DB08_LARHH Length = 1092 Score = 491 bits (1264), Expect = e-137, Method: Composition-based stats. Identities = 76/404 (18%), Positives = 138/404 (34%), Gaps = 37/404 (9%) Query: 31 NMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHYNIVEL-------- 77 N + +L + F + + + +K + R + R + V Sbjct: 685 NREPHNGAVLFCDLDRFKNINDSLGHTLGDAVLKEVARRLVARVRPGDTVCRYGGDEFVL 744 Query: 78 ----LCDYAPARRFGKA-------GMELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRAL 126 L D + + + L L L + AVF + + Sbjct: 745 VLPGLSDCVVLEQLAEQLLADVSSPILLDGLDLRVTPSLGVAVFPRDGNDCDALLRHADA 804 Query: 127 QFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPIVDPLSRR 186 + +F +D + L S + P VD R Sbjct: 805 ALYHAKSRGRNTYRFFTREIDDRVSEYLH-IEHGLRSALERGE--FELHYQPQVDMAFGR 861 Query: 187 IIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTM---AHALELGDKM 238 ++ EA+++ SP + G I + A L Sbjct: 862 VVGVEALLRWKHPEQGMISPVRFVPIAEETGLIVPIGMWVIREACRQAMLWRRAGLRPMT 921 Query: 239 ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAA 298 +++NL + + + + L P + VE TES ++ E +++L+A Sbjct: 922 MAVNLSGRQFSR--SVIEAIDEALADSGLDPRWLQVEVTESVIMEDTQEAYTVLEALRAR 979 Query: 299 GISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQ 358 G++VA+D FG G++ L L RF D++KI + I ++ I+ AII +L I+ Sbjct: 980 GLTVAVDDFGTGYSSLAYLKRFPIDKLKIDRSFIRDIDLDEDNPVIVDAIIGMAHNLRIK 1039 Query: 359 VSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEK 402 V A GV T +W +L G + QG L ++ + E+ Sbjct: 1040 VLAEGVETRAQWDYLRQQGCDEVQGYLVSRPQPAAALGQWMLER 1083 >UniRef50_C6ML43 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Geobacter sp. M18 RepID=C6ML43_9DELT Length = 773 Score = 490 bits (1262), Expect = e-137, Method: Composition-based stats. Identities = 66/429 (15%), Positives = 137/429 (31%), Gaps = 40/429 (9%) Query: 4 TLIYRSHIRDDEPVKK---IEEMVSIANRRNMQSDV-TGILLFNGSHFFQLLEGP----- 54 L Y++ + + + +S A + +L + F + + Sbjct: 205 QLAYQATHDPLTALPNRNLLADRISQALAWAQRHRRWIAVLFVDLDFFKFVNDSLGHGKG 264 Query: 55 EEQVKMIYRAICQDPRHYNIV-------------------ELLCDYAPARRFGKAGMELF 95 ++ +KM+ + + R + + E R + Sbjct: 265 DQLLKMVAERLSERVRQVDTLAHQGGDKFVVVLTDLRGNEEADRAVHVIREAISLPFLMD 324 Query: 96 DLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIAD 155 L + V+ K Q + + +R Y+ + + Sbjct: 325 GQELVISCSIGITVYPKDGEDAQTLVKNAEVAMYRAKEQGRNCFRYYTRELNER-VASRM 383 Query: 156 GSDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRK 210 +K L + + P D + R+ E +++ P + + Sbjct: 384 SMEKHLRKALEN--EEFELWYQPQADLNTGRLSGMEGLIRWRNAELGMVQPGSFIPLAEE 441 Query: 211 DGEIYTADLKS---KALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANAL 267 G I L L +++NL P + + + ++ L Sbjct: 442 TGLIVQIGEWVVRTACLQNRRWQDAGLSPLTVAVNLSPRQF-RDRELTGVIAGVLRETGL 500 Query: 268 VPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKI 327 P + +E ES V+ + A + LKA G+ +++D FG G++ L L RF ++KI Sbjct: 501 DPRYLGLEIVESMVMHDVESAAAMLNELKALGVKLSMDDFGTGYSSLSYLKRFPFAKLKI 560 Query: 328 SQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFA 387 + ++ AI ++II +L + V A GV T + +L + G QG + Sbjct: 561 DLSFVRDIMTDPGSAAIAKSIISMAHNLNLSVVAEGVETEGQLEFLRAHGCNEIQGYYLS 620 Query: 388 KAKLNGIPS 396 + Sbjct: 621 RPLPAAEFE 629 >UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47H73_DECAR Length = 585 Score = 489 bits (1261), Expect = e-137, Method: Composition-based stats. Identities = 68/414 (16%), Positives = 143/414 (34%), Gaps = 38/414 (9%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHY 72 ++ E++++ A R + V + + HF ++ + +E + + R + R Sbjct: 172 ERFEQLLAAAEREKSEIAV---IFLDLDHFKRVNDSLGHSVGDELLCEVARRLDSVVRRI 228 Query: 73 NIVELL---------------CDYAPARRFGKA---GMELFDLRLHERDDVLQAVFDKGT 114 + + L ARR + E+ L + +++ Sbjct: 229 DTLARLGGDEFIFAMPGFHTAAAVEVARRLVEVFSRPFEVAGHELTVTPSLGISIYPHDG 288 Query: 115 SKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF 174 + + +R + ++ + L + L + Sbjct: 289 RDLETLLRNADTAMYRAKEMGRNAFQFYSSEMNTTTLD-RLLMESNLRRALVQNEFI--L 345 Query: 175 AFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTMA 229 + P+V+ + II EA+++ P + G I A A Sbjct: 346 HYQPLVNLETGLIIGVEALIRWLHPELGLIMPDRFIHVAEETGLINPIGDWVLCEACRQA 405 Query: 230 HAL---ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFD 286 A L +++N+ P+ + V + + + L ++ +E TE V+ D Sbjct: 406 KAWCDAGLPPICMAVNVAPVQF-RQAGFVEMVAGALATSGLDASRLELELTERTVMHDAD 464 Query: 287 EFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQ 346 + +L G+ +++D FG G++ L L RF ++KI + + ++ AI Sbjct: 465 INMGTLSALHRMGVELSLDDFGTGYSSLAYLKRFPVGKLKIDRSFVNDLETDPDDWAIAS 524 Query: 347 AIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWP 400 I+ SL + V A GV E+ L G +M QG F++ + Sbjct: 525 TIVSMGRSLRMTVLAEGVEKVEQLALLRKMGCDMAQGYYFSRPMSADGMADMLR 578 >UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Proteobacteria RepID=Q21WW2_RHOFD Length = 874 Score = 489 bits (1260), Expect = e-137, Method: Composition-based stats. Identities = 64/385 (16%), Positives = 123/385 (31%), Gaps = 35/385 (9%) Query: 46 HFFQLLEGP-----EEQVKMIYRAICQDPRHYNIVELL------------------CDYA 82 HF + + +E + + + R + V L Sbjct: 473 HFKNVNDSLGHRVGDEVLIALAGRLKGAVREQDTVCRLGGDEFILVLPETNAAGAAHIAE 532 Query: 83 PARRFGKAGMELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYF 142 + EL L + A+F S F +R +F Sbjct: 533 MLLQSALVAFELEPHELTVTPSIGIALFPGDGSDFDTLSRCADAAMYRAKKDGRNNYRFF 592 Query: 143 EIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-- 200 + + L + + P + S R++ EA+++ + Sbjct: 593 TAEMQARS-ERTLTLENALRRALERNQL--QLHYQPQISLASGRVVGAEALLRWSHPELG 649 Query: 201 ---PSAIAVGQRKDGEIYTADLKSKA---LAFTMAHALELGDKMISINLLPMTLVNEPDA 254 P+ G I + +S+NL + D Sbjct: 650 AVPPAEFIPVAETCGLILPIGEWVLRTSVQQLKAWIDAGMLPIALSVNLSSVQF-RHADL 708 Query: 255 VSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGL 314 + + + L + +E TE+ ++ + +L G+ ++ID FG G++ L Sbjct: 709 PELVTSILNEAQLPAHLLELELTENVAMTDPLGAIAVMNNLHERGVRMSIDDFGTGYSSL 768 Query: 315 LLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLE 374 L +F+ +IKI Q + ++ + +AI+ AII TSL +Q A GV T + +L+ Sbjct: 769 SYLKKFRVYKIKIDQSFVRDITEDSDDKAIVGAIISMATSLGMQTIAEGVETEGQLEFLK 828 Query: 375 SAGIEMFQGDLFAKAKLNGIPSIAW 399 + G QG F++ Sbjct: 829 AKGCTEVQGYYFSRPLPVEQFEAFM 853 >UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KA22_AZOSB Length = 1006 Score = 489 bits (1259), Expect = e-136, Method: Composition-based stats. Identities = 70/407 (17%), Positives = 133/407 (32%), Gaps = 35/407 (8%) Query: 27 ANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHYNIVELL--- 78 A+ + ++ F+ HF + + + + + R + R + V L Sbjct: 592 ASLTQRRRGQLAVMFFDLDHFKNINDTLGHDFGDRLLVEVARRLESVLRGGDTVCRLGGD 651 Query: 79 ---------------CDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKGTSKFQLTYDD 123 A + L L + A++ + F + Sbjct: 652 EFVFLLPDTDAEGAARVAAKLLEAVAQPLVLDHQELTVTPSIGIAMYPDDGTDFDTLSRN 711 Query: 124 RALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPIVDPL 183 ++ +F + L + + P V Sbjct: 712 ADAAMYQAKREGRNGFRFFTEAMQARS-TRTLLLANALRHALDRGQFS--LHYQPQVSLA 768 Query: 184 SRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTMAHAL---ELG 235 R++ EA+++ SP +G I A + L Sbjct: 769 DGRVVGAEALLRWTHPEFGPVSPGEFVPIAESNGLIAQIGEWVLREAVAQSRRWLDEGLP 828 Query: 236 DKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSL 295 ++++NL N P+ + I+ L P Q+ +E TE+ + + +L Sbjct: 829 PLVMAVNLSAAQFRN-PNLPELVSQVIEEAGLPPHQVELELTEAVAMDDPQSAVRVMDAL 887 Query: 296 KAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSL 355 A GI ++ID FG G++ L L RF+ ++KI Q + ++ +AI+ AII SL Sbjct: 888 FARGIRMSIDDFGTGYSSLGYLKRFKVGKLKIDQSFVRDIGDDPDDKAIVSAIIHLAGSL 947 Query: 356 EIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEK 402 + A GV T ++ +L G + QG F++ E Sbjct: 948 GMLTVAEGVETLDQLDFLRQQGCDTVQGYYFSRPLPAEAFVGYLQES 994 >UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T1A8_JANMA Length = 910 Score = 487 bits (1255), Expect = e-136, Method: Composition-based stats. Identities = 67/419 (15%), Positives = 139/419 (33%), Gaps = 41/419 (9%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLE-----GPEEQVKMIYRAICQDPRHY 72 ++E ++ + R ++L + F + + + +K+I + R Sbjct: 492 DRLENAIAYSARN---GHAVWVVLVDLDRFKFVNDTMGHQAGDVLLKIISDRLQASVRES 548 Query: 73 NIVELL---------------------CDYAPARRFGKAGMELFDLRLHERDDVLQAVFD 111 + V L + + + AV+ Sbjct: 549 DTVARLGGDEFVLVLPECGDGPSGYSSDVIQRIMEAVVKPLTIQGSEFFLSCSMGIAVYP 608 Query: 112 KGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTIN 171 + + +R+ L ++ D L + EL + Sbjct: 609 NDGADPTTLLAHADVAMYRSKELGRNNFQFYTPAMNDQALERLR-IEGELRHAIELNELV 667 Query: 172 DHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAF 226 + P VD + I+ EA+V+ N P + + G I A Sbjct: 668 --LHYQPQVDLHTGAIVGLEALVRWNHPILGMVQPGSFISLAEETGLIIPIGAWVLQTAC 725 Query: 227 TM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVIS 283 + I++NL + + + + ++ L + +E TES V++ Sbjct: 726 RQAKAWQDMGFTQLRIAVNLSARQFT-QASLLESIKDTLQETGLEARFLEIELTESSVMA 784 Query: 284 RFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQA 343 + ++ LK+ G+ +++D FG G + L L RF D +KI + + ++ + + Sbjct: 785 DIERNILTLRDLKSLGVQLSVDDFGTGHSSLAYLKRFPIDTLKIDRSFVRDIAINQDDAS 844 Query: 344 IIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEK 402 I+ +II +L++ V A GV T + L + G QG F K + + Sbjct: 845 IVSSIISLAHNLKLNVIAEGVETASQMDILRAQGCNEIQGYYFCKPLPSDQIETLLLNE 903 >UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=16 Tax=Proteobacteria RepID=A1RPJ9_SHESW Length = 1511 Score = 487 bits (1255), Expect = e-136, Method: Composition-based stats. Identities = 71/405 (17%), Positives = 137/405 (33%), Gaps = 40/405 (9%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEG-----PEEQVKMIYRAICQDPRHY 72 ++ ++ A+R N ++ +L + F + + + +K + + R Sbjct: 1097 DRLNHAITQAHRAN---NIVALLFLDLDRFKHINDSMGHHVGDLLLKAAAKRLQNAVREG 1153 Query: 73 NIVELLC-------------------DYAPARRFGKAGMELFDLRLHERDDVLQAVFDKG 113 + V L R + L D L + +++ Sbjct: 1154 DTVARLGGDEFTIILEGVAKTKAATLISEKVLRAFQTPFLLEDKSLTISTSIGISLYPND 1213 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 + L ++ + + L ++ Sbjct: 1214 ADNADSLIKFADTAMYHAKSLGRNNFQFYTHKLNEIA-TRHVLLEAGLKQAIHRNELS-- 1270 Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNE-----DSPSAIAVGQRKDGEIYTADLKS---KALA 225 + P + EA+++ + SP + G I Sbjct: 1271 LVYQPKFSLRDGSLTGLEALLRWHHTELGPISPVEFIPLAEETGIINQIGHWVINHACQQ 1330 Query: 226 FTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 +AL + +++NL L D +S + + + L + + +E TES ++ Sbjct: 1331 LAEWNALGFNNISMAVNLSARQLK--ADIISTIEVALAVSGLPAQSLELELTESMIMGNP 1388 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 + + LKA G+++AID FG G++ L L RF D +KI +E + ++ AI Sbjct: 1389 QDSVSILSKLKALGLTIAIDDFGTGYSSLSYLKRFPIDTLKIDREFVRDITNDPDDAAIT 1448 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 AII SLE+ V A GV T + +L G + QG L +K Sbjct: 1449 SAIIALAHSLELNVVAEGVETQAQLNFLGLQGCDEVQGFLLSKPL 1493 >UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=3 Tax=Neisseriaceae RepID=C1DBY5_LARHH Length = 839 Score = 487 bits (1255), Expect = e-136, Method: Composition-based stats. Identities = 81/433 (18%), Positives = 152/433 (35%), Gaps = 43/433 (9%) Query: 10 HIRDDEPVKKI-------EEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQ 57 ++ + +P+ + E + + R + Q ++ + F + + ++ Sbjct: 405 YLANHDPLTDLPNRTLLMERLGAALTRAHRQGKRVALMFLDLDRFKFINDTLGHAVGDKL 464 Query: 58 VKMIYRAICQDPRHYNIVE---------LLCDYAPARRFGKAGMELFD----------LR 98 ++ + + R + V +L D R + +L D Sbjct: 465 LQTVASRLTGSLRASDTVARLGGDEFNIVLEDIRDLRGVAQTAQKLIDRVQGMVTLDGHD 524 Query: 99 LHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSD 158 ++ V A++ S ++ + +R +F S L + Sbjct: 525 VYVTASVGIAIYPDDGSTPEVLRMNADTAMYRAKERGKNNFQFFTADMNASTLARLR-LE 583 Query: 159 KELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNE----D-SPSAIAVGQRKDGE 213 L F P VD I EA+++ SP+ + Sbjct: 584 SNLHRALARQE--FQLHFQPKVDLAHGHIYGMEALLRWRSHELGPVSPADFIPIAEESNL 641 Query: 214 IYTADLKSKALAFTMAHAL---ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPE 270 I T A A L +++NL + + D V+ + ++ + L Sbjct: 642 ISTIGEWVLEQACRQARHWLNLGLLPGTVAVNLSSKQMT-QGDIVATVRRILEHSNLPGH 700 Query: 271 QIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQE 330 + +E TES + E +K+LKA G+ +AID FG G++ L L + D +KI + Sbjct: 701 YLELEITESVAMDNTGEMIRTLKNLKALGVRIAIDDFGTGYSSLSYLKQLPIDVLKIDRS 760 Query: 331 LITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 +T++H+ AI AII SL +Q A GV E +L G + QG LF++ Sbjct: 761 FVTDLHEDRDDAAIASAIISMGQSLNLQPVAEGVEREEHRQFLLDHGCQYGQGYLFSRPV 820 Query: 391 LNGIPSIAWPEKK 403 E + Sbjct: 821 PAATMEQLLLESQ 833 >UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZ79_9PROT Length = 923 Score = 487 bits (1255), Expect = e-136, Method: Composition-based stats. Identities = 65/409 (15%), Positives = 143/409 (34%), Gaps = 38/409 (9%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEG-----PEEQVKMIYRAICQDPRHY 72 ++ +M+++A+R Q ++ + F + + + ++ + I R Sbjct: 511 DRLGQMIAVAHRDKHQFS---LIFLDLDRFKYINDSMGHSVGDRLLQSVALRIQDCVREG 567 Query: 73 NIVELL----------------CDYAPARRF--GKAGMELFDLRLHERDDVLQAVFDKGT 114 + V L + +L + + + +++ Sbjct: 568 DTVARLGGDEFIVLLREAGESAASVVAQKLLIALATPYDLDGQVISTQASIGISIYPDQA 627 Query: 115 SKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF 174 + + +R +F + + +K+L + Sbjct: 628 QDADTLIKNADMAMYRAKEEGRNNFQFFVPEMNFR-VDLLFSMEKDLRLALERGEL--FL 684 Query: 175 AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTMA 229 + P D S + EA+++ + SP+ + G+I A + Sbjct: 685 QYQPQADLASGTLSGVEALIRWDHPVKGQVSPAEFIPVAEETGQIVAIGEWVLRTACSQM 744 Query: 230 HAL---ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFD 286 + D I++NL L +PD + + + L + +E TE ++ Sbjct: 745 AEWRKTGMHDLTIAVNLSIRQL-RQPDLAELIKSVLLETGLDARHLELEITEGIMMGDNQ 803 Query: 287 EFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQ 346 + ++ G+ ++ID FG GF+ L L + +++KI Q I ++ AII+ Sbjct: 804 AAFRFLSEMQDLGVQLSIDDFGTGFSSLNYLKQMPVNKLKIDQSFIRDIETDEGDAAIIR 863 Query: 347 AIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIP 395 +II L ++V A GV T E+ +L G + QG +++ L Sbjct: 864 SIISLGHRLNLRVIAEGVETQEQLDFLRIRGCDEIQGYFYSRPLLAEDF 912 >UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q3SIW6_THIDA Length = 1212 Score = 487 bits (1255), Expect = e-136, Method: Composition-based stats. Identities = 71/418 (16%), Positives = 141/418 (33%), Gaps = 39/418 (9%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHY 72 ++++ +++A R V + F + + ++ + + R + + R Sbjct: 800 TQLDQTLALARREQRTLAVV---FLDLDRFKSINDSLGHALGDQLLVEVARRLRDNVRDS 856 Query: 73 NIVELLC------------DYAPARRFGKAG-------MELFDLRLHERDDVLQAVFDKG 113 +IV L D A A R + LH + +++ Sbjct: 857 DIVARLGGDEFVVVLTEVGDAAGAARVADKLLGALVPRYRIGGHALHTTASIGISLYPHD 916 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 + + + +F S L D +L + Sbjct: 917 GDDADALMKNADTAMYHAKSQGRDNVQFFTPEMNQSVL-KRLQFDHDLRVAVEAG--QFE 973 Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTM 228 + P ++ S R++ EA+V+ SP+ + G I A Sbjct: 974 LHYQPQINSTSGRVVKVEALVRWQHPREGLVSPAEFIPIAEETGLILPLGEWVLNEACRQ 1033 Query: 229 ---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 + D +++NL L + P + + + + L + +E TES + Sbjct: 1034 LRLWRDAGITDLTVAVNLSAHQL-HSPALIPMVARTLGNHGLEGADLCLEITESVAMRDT 1092 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 +++L+ GI ++ID FG G++ L L D +K+ Q + + + AI Sbjct: 1093 TASIAQLQALRDLGIHLSIDDFGTGYSSLSYLKLLPIDTLKLDQSFVCEIEFNPSDVAIC 1152 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEKK 403 A I SL ++V A G+ T + L S + QG LF+ E++ Sbjct: 1153 AATIALAHSLGLEVVAEGIETETQRRLLASHRCDFMQGYLFSAPLPAERALAYIREQQ 1210 >UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ATC4_PELPD Length = 876 Score = 487 bits (1254), Expect = e-136, Method: Composition-based stats. Identities = 60/429 (13%), Positives = 133/429 (31%), Gaps = 43/429 (10%) Query: 10 HIRDDEPVKKI-------EEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQ 57 H+ + + + + + ++ + ++ + F + + + Sbjct: 432 HMAHHDALTGLPNRTLFFDRLRQGLYKKERSGKMLAVIYLDLDRFKIINDTLGHHTGDML 491 Query: 58 VKMIYRAICQDPRHYNIVELL----------CDYAPARRFG---------KAGMELFDLR 98 +K + + R + + L PA A L Sbjct: 492 LKEVADRLRGVVRKADTISRLGGDEFTIIIDEIATPADSLLVAEKILHVFSAPFRLEKHE 551 Query: 99 LHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSD 158 + + ++ + + + +F + + Sbjct: 552 MFITASMGVTLYPNDGDTAEKLLKNADTAMYHAKEEGRNTYQFFSEEMNSR-VSERLSME 610 Query: 159 KELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGE 213 L + P V+ + RI+ EA+++ + P A + G Sbjct: 611 TGLRHALARNEFL--LHYQPRVNTTTGRIVGVEALIRWQQPQKGLILPDAFIPLAEETGL 668 Query: 214 IYTADLKSK---ALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPE 270 I IS+N+ ++ + + ++ L P Sbjct: 669 IIPIGEWVLRNTCTQARAWQEAGFAQMRISVNISCRQFTHD-NLPDTIRGILRETGLQPS 727 Query: 271 QIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQE 330 + +E TES ++ + + LK GIS+AID FG G++ L LL R D +KI + Sbjct: 728 CLELEITESVIMLNPERAISLLNELKEMGISIAIDDFGTGYSSLSLLKRLPADILKIDKS 787 Query: 331 LITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 ++ + + + ++ II ++ + + A GV E+ +LE + QG F+K Sbjct: 788 FVSGIPGNKSDETLVATIINLGHNMGLGLVAEGVERQEQLHFLEERNCQEVQGYYFSKPL 847 Query: 391 LNGIPSIAW 399 Sbjct: 848 PAETLQPLL 856 >UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT5_BREBN Length = 815 Score = 486 bits (1253), Expect = e-136, Method: Composition-based stats. Identities = 69/405 (17%), Positives = 143/405 (35%), Gaps = 41/405 (10%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHY 72 +K+ E + A +++ + G++ + F + + + ++ + + R Sbjct: 401 EKLAEAMLKAKQKDEKI---GVMFIDLDRFKNINDTLGHSIGDVLLQAVANRLICCLRKE 457 Query: 73 NIVELLC--------DYAPARRFGKAGME----------LFDLRLHERDDVLQAVFDKGT 114 + V L R G+ L + + + +++ Sbjct: 458 DSVSRLGGDEFAIFLTGVTHREAGEIAQRIITSMSESITLDHIEIFITPSIGISMYPDDG 517 Query: 115 SKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF 174 + + +F L ++EL Sbjct: 518 DDIEALLKHADAAMYLAKEQGKNNYQFFSEELHQ-VLAKKLQLERELRKALD--EKQFTL 574 Query: 175 AFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTM- 228 + P + + +II EA+++ + P + G I A Sbjct: 575 HYQPKIHLQTGQIIGMEALIRWDHPDLGLIPPIQFIPIAEETGLIVPLGEWVMRTACQQT 634 Query: 229 --AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFD 286 +++N+ + + + + + + ++ L P+ + +E TES + D Sbjct: 635 KAWQEAGFTQLAVAVNISLRQFM-QNNLIEMITSILEETGLAPQYLELEITESMAL-NVD 692 Query: 287 EFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQ 346 + LKA G+S++ID FG G++ L LS+F DR+KI Q + N+ + QAII+ Sbjct: 693 YTIRILNRLKALGVSISIDDFGTGYSSLSYLSQFPIDRLKIDQSFLRNL--NPQNQAIIK 750 Query: 347 AIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 II +++I V A GV T E +L+ QG ++K Sbjct: 751 TIIHMAHNMKIAVIAEGVETHEHVDFLKEQLCNEVQGYFYSKPLP 795 >UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax=Proteobacteria RepID=A1K5K2_AZOSB Length = 1089 Score = 486 bits (1252), Expect = e-136, Method: Composition-based stats. Identities = 74/416 (17%), Positives = 137/416 (32%), Gaps = 43/416 (10%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHY 72 +++ + A R ++L + F + + + ++ R + R Sbjct: 671 DRMQRAIIRAARD---GHAVAVMLLDLDRFKLINDSLGHAAGDALLQETARRLSASVRRG 727 Query: 73 NIVELL-------------------CDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKG 113 + V L A M L + + +++ + Sbjct: 728 DTVARLGGDEFMVVMSDMSAEDAAAALAAKVLESLAEPMLLNGREIVATGSIGVSLYPRD 787 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 + +R L + ++ + L EL++ ND Sbjct: 788 GEAAATLLKHADVAMYRAKELGRNRFQFYAPEMNERIL-----ERLELENSLRRALENDE 842 Query: 174 F--AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKS---KA 223 + P V R+I EA+++ SP+ + G I Sbjct: 843 LELHYQPKVSLRDGRVIGAEALIRWRHPQLGMVSPADFIPLAEETGLIVPIGEWVVDHAC 902 Query: 224 LAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVIS 283 L +++N+ +E L + A+ L P Q+ VE TES V+ Sbjct: 903 RQLRAWLDAGLPQISVAVNVSARQFQHE-QLTHVLARALAAHRLPPGQLHVEVTESAVMC 961 Query: 284 RFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQA 343 + ++ LK G+ +++D FG G+ L L RF D IKI + +T++ S A Sbjct: 962 EPERTIFTLRELKNIGVRISLDDFGTGYCSLNYLKRFPIDSIKIDRCFVTDLATSAEDAA 1021 Query: 344 IIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAW 399 I I+ SL V A GV + +L G + QG LF++ + Sbjct: 1022 IALMIVSLAHSLNQTVIAEGVENEAQLDFLRRHGCDEMQGFLFSRPLPAAEFARLL 1077 >UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4Q9_AZOSE Length = 813 Score = 486 bits (1252), Expect = e-136, Method: Composition-based stats. Identities = 72/432 (16%), Positives = 141/432 (32%), Gaps = 37/432 (8%) Query: 2 LTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSD-VTGILLFNGSHFFQLLEGP-----E 55 + L Y + + + ++ ++ ++ + F + + + Sbjct: 380 IQHLAYHDTLTGLANRFSLTARLQLSVAEARRNGQRLAVMFLDLDRFKHINDSLGHPVGD 439 Query: 56 EQVKMIYRAICQDPRHYNIVELL---------------CDY--APARRFGK--AGMELFD 96 E +K + R + R + V L D A+ + A + Sbjct: 440 ELLKQVARRLRDAVRETDTVARLGGDEFVVVLQGIGGAHDVTHVAAKLLAQLSAPYCVDT 499 Query: 97 LRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADG 156 LH + ++F ++ + + + ++ + Sbjct: 500 TELHTTASIGISLFPDDSADPAALMRNADTAMYHAKAAGRAKFQFYTDEM-NRAATARLD 558 Query: 157 SDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKD 211 +++L + P D + EA+V+ P + Sbjct: 559 LERKLRGAVARGE--FELWYQPQFDSRHGHLTGLEALVRWRHPQDGLIAPLRFIPLAEET 616 Query: 212 GEIYTADLKSKALAFTMAHAL---ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALV 268 G I A A L + IS+NL L E V + + A+ L Sbjct: 617 GVIVEIGTWVLREACRQARQWLDAGLPELRISVNLSVRQL-REKCLVDTVWTTLAASGLR 675 Query: 269 PEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKIS 328 P + +E TES V+ DE +++LK G+ +AID FG G + L L F D +KI Sbjct: 676 PGLLELEITESAVMDNPDEAVALLQALKNLGVRIAIDDFGTGHSSLSYLKLFPLDHLKID 735 Query: 329 QELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 + I+++ I+ A + +L + V A GV + + L G + QG F++ Sbjct: 736 RSFISDIEHDANDTMIVAAAVSLAHNLGLSVIAEGVESAVQVARLRELGCDELQGFHFSR 795 Query: 389 AKLNGIPSIAWP 400 + Sbjct: 796 PVTADVVENLLR 807 >UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHI4_CELJU Length = 595 Score = 486 bits (1252), Expect = e-136, Method: Composition-based stats. Identities = 71/417 (17%), Positives = 142/417 (34%), Gaps = 43/417 (10%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHY 72 K + + A R Q V L + F + + ++ + + R Sbjct: 170 KLLAVAIESARRHQRQLAV---LFIDLDRFKNINDTLGHDAGDQLLITMANRFRTCLRTS 226 Query: 73 NIVELL--------------CDYAPA-----RRFGKAGMELFDLRLHERDDVLQAVFDKG 113 +IV L D A +++ + ++ + Sbjct: 227 DIVGRLGGDEFVILLPELESHDQAARVAQKILSAAIQPLDVHGQECRVTASIGICLYPED 286 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 Q + + +R ++ L + L++ Sbjct: 287 AEDEQALMKNADIAMYRAKEEGKNNYQFYSPD-----LKVRSLERLMLENNLRKALERHE 341 Query: 174 F--AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAF 226 F + + + +I EA+V+ SP+ + G I A Sbjct: 342 FFLHYQAKRNLKTGKIAGVEALVRWQHPELGTISPAHFIPLAEETGLIVHLGRWVLRAAC 401 Query: 227 TM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVIS 283 T L I++NL ++ + ++ + N ++ + L PE + +E TE ++ Sbjct: 402 TQGVIWQQQGLPPICIAVNLSARQFFDD-NLINDIANALRESGLAPELLEMEITEGMIMQ 460 Query: 284 RFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQA 343 + + +KA G+ +AID FG G++ L + RF D +K+ I ++ + +A Sbjct: 461 DAERAIRILTGIKALGVRLAIDDFGVGYSSLAHIKRFPIDTLKVDSSFIRDIPANREDRA 520 Query: 344 IIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWP 400 I +AII +L + V A GV T E+ +L + + QG F+K + Sbjct: 521 ITEAIIAMGKTLSLTVIAEGVETQEQENFLRDSACDQTQGYYFSKPVSPEEFTRFML 577 >UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P464_9PROT Length = 1347 Score = 485 bits (1251), Expect = e-136, Method: Composition-based stats. Identities = 71/437 (16%), Positives = 144/437 (32%), Gaps = 48/437 (10%) Query: 8 RSHIRDDEPVKKIEEMV-------SIANRRNMQSDVTGILLFNGSHFFQLLEGP-----E 55 R H+ +P+ + + + + G+L + F + + + Sbjct: 912 REHLAHYDPLTDLPNRLLLRSHLTHALAQAKRHHNQVGVLYLDLDRFKNINDSLGYQVGD 971 Query: 56 EQVKMIYRAICQDPRHYNIVELL----------------CDYAPARRFGKAGMELFDL-- 97 E + + + R +++ L AR + + F L Sbjct: 972 ELLVTLTERLTMHMRSEDLLARLGGDEFLLVLEHINEPEDSAIVARSLLETLAQPFVLHG 1031 Query: 98 --RLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIAD 155 + + ++F + + L ++ L A Sbjct: 1032 EREIFIGASIGISIFPNDGDSAEQLIQHADAAMHQAKTLGRNTYHFYTED-----LSRAS 1086 Query: 156 GSDKELDSCALSPTINDHF--AFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQ 208 EL++ + + P VD + II EA+V+ + P Sbjct: 1087 NEHLELENRLRHAITANQLRVYYQPQVDIATGHIIGAEALVRWQDPERGLVQPGQFIPLA 1146 Query: 209 RKDGEIYTADLKSK---ALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKAN 265 + G I L L +++NL P + + + + Sbjct: 1147 EETGLIGAIGEWVLKETCLQGMRWIDAGLPFLTLAVNLSPHQFLR-GNIAGLISKVLAET 1205 Query: 266 ALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRI 325 +++ +E TES ++ + ++ + + L+A I +AID FG G++ L L RF D + Sbjct: 1206 GFPADRLELELTESALMQQGEDVIKMLHLLRAQDIRLAIDDFGTGYSSLSYLKRFPLDIL 1265 Query: 326 KISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDL 385 KI + + ++ I II L +V A GV T E+ +L++ G +++QG L Sbjct: 1266 KIDKSFVDDIPFHQDDMEIAATIIAMGHILGFKVLAEGVETREQLEFLQARGCDLYQGYL 1325 Query: 386 FAKAKLNGIPSIAWPEK 402 + E Sbjct: 1326 TSPPIPAEEFEKLLKEN 1342 >UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Comamonadaceae RepID=A1W8G6_ACISJ Length = 756 Score = 485 bits (1250), Expect = e-135, Method: Composition-based stats. Identities = 69/430 (16%), Positives = 148/430 (34%), Gaps = 42/430 (9%) Query: 11 IRDDEPVKKIEEMVSIANR-------RNMQSDVTGILLFNGSHFFQLLEGP-----EEQV 58 + + + ++ V +A R ++ + +F + + + + Sbjct: 329 MAHYDALTELPNRVLLAERGQDAIRQAQESGAPLAVMFLDLDNFKHVNDSLGHRIGDALL 388 Query: 59 KMIYRAICQDPRHYNIVELL------------------CDYAPARRFGKAGMELFDLRLH 100 I + + R + V L A + + + L Sbjct: 389 VEIAQRLRTTVRQRDTVARLGGDEFVLLLPGANAQGAARVAAKMQEAALQPVHIQHHELS 448 Query: 101 ERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKE 160 + A+F + S F+ +R +F + + A Sbjct: 449 LALSMGIALFPEHGSDFETLIQSADTAMYRAKADGRNSFRFFTPTMQ-AQSARALQLTNA 507 Query: 161 LDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIY 215 L ++ + P V + R+ EA+++ + SP+ G+I Sbjct: 508 LRRALERNQLS--LHYQPQVSIATGRVCGVEALLRWHHPELGAVSPAEFIPVAEDTGQIL 565 Query: 216 TADLKSKALAFTM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQI 272 A H+ L +++NL + +P + + + + P + Sbjct: 566 PIGEWVLRTALAQLRTWHSQGLPALTMAVNLSAVQF-RQPQLLELVDRLLAEYGVQPHLL 624 Query: 273 IVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELI 332 +E TE+ ++ + L A G+ +++D FG G++ L L RFQ R+KI Q + Sbjct: 625 ELELTENVAVADPHAAIATMDQLHAKGVRLSMDDFGTGYSSLSHLKRFQIYRLKIDQSFV 684 Query: 333 TNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLN 392 ++ G +AI+ AII+ +L ++ +A GV T + +L G + QG F++ Sbjct: 685 RDLDHDGNDRAIVSAIIRMAQALGMRTTAEGVETAHQLTFLREQGCDEAQGFYFSRPLGA 744 Query: 393 GIPSIAWPEK 402 ++ Sbjct: 745 PHLQQYLLQR 754 >UniRef50_A4U4R0 Sensory box/GGDEF family protein n=3 Tax=Magnetospirillum RepID=A4U4R0_9PROT Length = 840 Score = 485 bits (1249), Expect = e-135, Method: Composition-based stats. Identities = 69/417 (16%), Positives = 153/417 (36%), Gaps = 38/417 (9%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGPEEQV-----KMIYRAICQDPRHY 72 +++ ++ A R ++ + F + + + K + + + + R Sbjct: 425 ERLRTALAQAKRL---GHKVALMFLDLDKFKDINDTLGHHLGDLLLKAVAKRLLRCVRET 481 Query: 73 NIVELL------------CDYAPARRFGK-------AGMELFDLRLHERDDVLQAVFDKG 113 + V L D A + L + ++ + +F Sbjct: 482 DTVARLGGDEFAVVLTNLDDPEGASNVAESIIASISEPFGLDEHEVNTSTSIGITIFPDD 541 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 ++ + L FR+ ++ D+ + + +L T Sbjct: 542 AVDSEVLLKNADLAMFRSKAEGRNNYHFYVAEM-DAEIQARKVVEHDLRVAL--GTDQLE 598 Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSK---ALA 225 + P+++ + ++ EA+++ SP + I L Sbjct: 599 MHYQPLIEMKTGEVVGCEALIRWKHPTRGWVSPVEFIPIAERTDLIVPLGRWILHRSCLQ 658 Query: 226 FTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 L + I++NL P+ N ++ + + + P+Q+ +E TE + Sbjct: 659 GRDWARAGLPPQKIAVNLSPVQFKNHTALLAMIADILDQTGFPPDQLQLEITEGIAMQNV 718 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 + + ++ L+ G+ ++ID FG G++ L L RF D++KI + + ++ A++ Sbjct: 719 EATVDVLRQLRDMGVLISIDDFGTGYSSLNYLKRFPVDKLKIDRSFVVDIGLHPDNAAVV 778 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEK 402 AI+ SL +V+ GV T E+ +L++ G++ QG FAKA + EK Sbjct: 779 NAIVTLGHSLGTRVNVEGVETIEQLDFLKAHGVDEAQGFYFAKALPPDEFARFVREK 835 >UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A628_PELCD Length = 1063 Score = 484 bits (1248), Expect = e-135, Method: Composition-based stats. Identities = 76/410 (18%), Positives = 142/410 (34%), Gaps = 40/410 (9%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHY 72 +E + A R N +LL + +F + + + ++ + + + R Sbjct: 644 DHMELALGQARRLNK---FVAVLLLDLDNFKHINDTLGHATGDLLIRSVAERLRTECRTC 700 Query: 73 NIVEL------------LCDYAPARRFGKAGMELFDLR--------LHERDDVLQAVFDK 112 + + L D + M L R ++ + A++ + Sbjct: 701 DTLARWGGDEFVLLLTDLDDIQNTTSATEKFMALLTERPFATSECDINTTASIGIALYPQ 760 Query: 113 GTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTIND 172 + + +F + + + L S + Sbjct: 761 DGQDPETLLKRADTAMYEAKKNGRNGYHFFSLQLAEQA-ERRHRMEINLRSALKEGEM-- 817 Query: 173 HFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFT 227 + P +D RI EA+++ SP+ + G IY A Sbjct: 818 QLVYQPQIDLGKVRITGMEALLRWQSPEEGTISPARFIPLAEETGLIYPLGEWVLQQACR 877 Query: 228 M---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISR 284 E +++NL ++PD + ++ L P + +E TES + Sbjct: 878 QGAIWQKTEASPLCVAVNLSAKQF-HQPDLAKNIKKILRETGLSPHLLELEITESVFLEN 936 Query: 285 FDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAI 344 + EA+ LK G+ +ID FG G++ L L + DRIKI+QE + ++ +AI Sbjct: 937 MEAAIEALTELKKLGVQFSIDDFGTGYSSLSYLKKLPIDRIKIAQEFVRDIDTDDGDKAI 996 Query: 345 IQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGI 394 I+A I SL +++ A GV ++ +L G QG FAK Sbjct: 997 IKATIAMAKSLGMKLIAEGVENHQQLAFLLLHGCHAMQGYYFAKPMPAQE 1046 >UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DA12_LARHH Length = 1041 Score = 484 bits (1248), Expect = e-135, Method: Composition-based stats. Identities = 64/402 (15%), Positives = 140/402 (34%), Gaps = 35/402 (8%) Query: 32 MQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHYNIVELLC------- 79 +L + F + + + ++ + + +I+ L Sbjct: 620 QHQHPLAVLFVDLDKFKTINDTLGHAVGDVVLREVAGRLSDFAGPDDILARLGGDEFLLV 679 Query: 80 DYAPARRFGK-----------AGMELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQF 128 R + + L + +++ + + + + Sbjct: 680 LPGADERAASEVAACILTAMSVPVRVDGRELPTTPTIGVSLYPRDGEEADDLIRNADIAM 739 Query: 129 FRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPIVDPLSRRII 188 ++ + ++ EL + L I + P +D ++ Sbjct: 740 YQAKARGRNTFQLYTPDM-NAAAAERLQLQGELRNAHLRGEIM--LHYQPQIDVTDGHVV 796 Query: 189 AFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTM---AHALELGDKMIS 240 EA+++ SP + G I T + A L ++ Sbjct: 797 GCEALMRWKHPTLGMVSPGRFIPLAEESGLIITLGNWAIREACRQAMVWQRAGLPPLTVA 856 Query: 241 INLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGI 300 +NL + + + + + + +L P+ + +E TES V+ ++ + LKA G+ Sbjct: 857 VNLSGCQF-QQSNFTAVVADALADTSLPPQYLELELTESIVMHDVEQVIATLTELKALGV 915 Query: 301 SVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVS 360 ++ID FG G++ L L RF D +KI Q + +V AI++AII L +++ Sbjct: 916 QLSIDDFGTGYSSLNYLKRFPVDLLKIDQGFVRDVETDPSDAAIVRAIIALGKILNLRLI 975 Query: 361 AMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEK 402 A GV T + +L +AG++ QG F++ + ++ Sbjct: 976 AEGVETQGQLDYLHAAGVDFIQGYYFSRPLPAEDMATYLAQR 1017 >UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Bacteria RepID=B2JCW5_BURP8 Length = 1040 Score = 484 bits (1247), Expect = e-135, Method: Composition-based stats. Identities = 73/406 (17%), Positives = 145/406 (35%), Gaps = 39/406 (9%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHY 72 +++ + +A R + V + F + + + + ++ + + R Sbjct: 620 DRLQHALIVAQRHHKGVAVV---FIDLDGFKNVNDSLGHSVGDRLLSVVADRLARCARAS 676 Query: 73 NIVE---------LLCDYAPARRFGKAGME----------LFDLRLHERDDVLQAVFDKG 113 + V ++ D + L L+ + ++F + Sbjct: 677 DTVARHGGDEFVIVMTDTVDEQSLIAWMERVRASISEPVWLDGTELYVGCSMGASLFPQD 736 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 + L +R + +++ S + + Sbjct: 737 GDDAETLMKKADLAMYRAKDMGRNTFQFYQPEMNVSAGARLNLERR---LRRALRDNEFL 793 Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTM 228 + P VD + +++ EA+V+ ++ PS + G I A Sbjct: 794 LHYQPQVDIETGQVVGMEALVRWHDPEVGLIPPSQFIPVAEESGLIGPLSEWVLREACRQ 853 Query: 229 ---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 L +S+NL + D ++ ++ L P+ + +E TES ++ Sbjct: 854 NKAWQDEGLPPARVSVNLSARQF-QQRDIAKLVMQVLEETGLDPQYLELELTESTIMRNA 912 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 +E + L A GI +AID FG G++ L L RF DR+KI + ++++ +S + I Sbjct: 913 EEAVSMLNELHALGIGLAIDDFGTGYSSLSYLKRFPVDRLKIDRSFVSDIGESSDDETIT 972 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 AII SL +QV A GV T + +L+ + QG FAK Sbjct: 973 SAIIALAHSLNLQVIAEGVETSTQLDFLKERACDEMQGYFFAKPLP 1018 >UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YLL7_9CYAN Length = 872 Score = 484 bits (1247), Expect = e-135, Method: Composition-based stats. Identities = 64/424 (15%), Positives = 148/424 (34%), Gaps = 41/424 (9%) Query: 13 DDEPVKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQ 67 + + + +++AN + + G+ + F + + ++ ++ + + Q Sbjct: 444 PNRLLFDEQLALALANSKQQPE-LLGVAFLDLDRFKVVNDTLGHGIGDQLLQQVATRLKQ 502 Query: 68 DPRHYNIV-------------------ELLCDYAPARRFGKAGMELFDLRLHERDDVLQA 108 R+ + + E+ + + L+ + A Sbjct: 503 CLRNCDTIARWGGDEFTLLFPHLTSTDEITKIAHRILDKLSIPFVIDNQELYVTASLGIA 562 Query: 109 VFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSP 168 + Q +R F L L++ Sbjct: 563 LCPYDAEDAQTLLKHADAAMYRAKKQGRNNFQVFAEEMHREALNQLT-----LEADLRRA 617 Query: 169 TINDHF--AFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKS 221 I + F + P V+ + +I+ EA+++ + P + G I Sbjct: 618 LIKEEFLLYYQPQVEISTGKIVGLEALIRWQHPTLGFVPPDQFIPLAEEIGLIAPIGQWV 677 Query: 222 KALAFTM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTE 278 A A L I++NL ++ ++ +L ++ + P+ + +E TE Sbjct: 678 LQTACIQHQSWQAEGLPPVRIAVNLSARQF-HQSQLINIILQTLETTEIDPQYLELEITE 736 Query: 279 SEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKS 338 S + + + ++ L+ G+ + ID FG G++ L +L F + +KI + + ++ ++ Sbjct: 737 SAAMQDVEFTIQTLQELREMGLHITIDDFGTGYSSLNVLKHFPLNTLKIDRSFVQDIVEN 796 Query: 339 GPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIA 398 AI Q I+ L+++V A GV TP++ +L S ++ QG F + Sbjct: 797 SRDAAIAQTIVALSQGLKLKVVAEGVETPQQLSFLRSIHCDLAQGYYFCPPVPAIEIAKL 856 Query: 399 WPEK 402 + Sbjct: 857 LRQS 860 >UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Magnetospirillum RepID=Q2W807_MAGSA Length = 880 Score = 484 bits (1247), Expect = e-135, Method: Composition-based stats. Identities = 78/410 (19%), Positives = 144/410 (35%), Gaps = 44/410 (10%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHY 72 +++ ++ A+R Q I+ + F ++ + ++ + I R Sbjct: 458 DRLQIAIANAHRHGQQL---AIMFLDLDLFKRINDSLGHGVGDQVLVETAARISHCVREG 514 Query: 73 NIVELL---------------CDYA--PARRFG--KAGMELFDLRLHERDDVLQAVFDKG 113 + V L D A R K + D L+ + AV+ + Sbjct: 515 DTVARLGGDEFTVLLPELDHLEDVAKLAERVIAHVKQPFLVDDNELYVTTSIGIAVYPED 574 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 + + + +R L + F + L Sbjct: 575 GTTVEALIKNADTAMYRAKDLGRNSYQLYTAAMNARS-FERLTMESSLRHALTREEFR-- 631 Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTM 228 + VD R+ EA+V+ + SP G I A Sbjct: 632 LVYQVKVDSEDGRMSGVEALVRWHHPEMGLVSPVDFIPLAEAMGVISDIGEWVLRTACRQ 691 Query: 229 ---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 L L I++N+ V E D + ++ L P+ + +E TE+ ++ R Sbjct: 692 CKHWMDLGLPPVRIAVNVSAQQFV-ETDVPEVVARALRETGLPPQYLELELTETVLMQRV 750 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKS-----GP 340 DE +KSL+A G+ ++ID FG G++ L L R D +K+ + + ++ Sbjct: 751 DEVVAVLKSLRAMGVRISIDDFGTGYSSLSYLKRMPIDALKVDRSFVNDIFDGQSKVTED 810 Query: 341 RQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 I+ II +L+++ A GV TPE+ +L S G + QG L ++ Sbjct: 811 GAEIVSTIINLAHNLKLKAIAEGVETPEQAEFLRSKGCDEVQGYLISRPV 860 >UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RJ77_9PROT Length = 1399 Score = 484 bits (1246), Expect = e-135, Method: Composition-based stats. Identities = 60/411 (14%), Positives = 131/411 (31%), Gaps = 35/411 (8%) Query: 21 EEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHYNIV 75 E + R + + ++ + F + + + + + + + R + V Sbjct: 990 ERVRHDLARAHRGREALALMFVDLDRFKNVNDSLGHRVGDALLIQVAERLRRAVRDEDTV 1049 Query: 76 ELL------------------CDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKGTSKF 117 L A + L A++ F Sbjct: 1050 SRLGGDEFIVVLPSTDADGAAHVAAKLLEVMAPAYRIEQHELTCSLSAGIAMYPADGESF 1109 Query: 118 QLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFH 177 + +R +F ++ + +L + + + Sbjct: 1110 EALSMSADTAMYRAKQSGRNAYCFFTAEMQERS-ARNLQIENDLRRALENGELR--LHYQ 1166 Query: 178 PIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTM---A 229 P RR++ EA+++ SP + G I A + Sbjct: 1167 PQFTLADRRLVGAEALLRWQHPQLGMVSPVEFIPIAEECGLILPIGEWVLRAAVSQLRVW 1226 Query: 230 HALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFA 289 L +++NL + + + + A L + + +E TES + Sbjct: 1227 QQEGLPPMTVAVNLSAVQF-RQASLTDVVSRILDAEGLAAQFLELELTESVAMDNPLAAI 1285 Query: 290 EAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAII 349 + L+A G+ ++ID FG G++ + L RF+ ++KI + + ++ +AI+ A I Sbjct: 1286 ATMDKLRALGVRMSIDDFGTGYSSMSYLKRFRVHKLKIDRSFVADLAADPEDEAIVTATI 1345 Query: 350 KCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWP 400 L +Q A GV + + +L + G + QG LF++ + Sbjct: 1346 SLARDLGLQTIAEGVESEAQLAFLRAKGCDEAQGYLFSRPLAPAQFAAFVR 1396 >UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A14_DECAR Length = 827 Score = 484 bits (1246), Expect = e-135, Method: Composition-based stats. Identities = 68/415 (16%), Positives = 133/415 (32%), Gaps = 39/415 (9%) Query: 17 VKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRH 71 + ++ +++ A R ++ + F + + +E ++ + + R Sbjct: 413 LMRLAQLLPEARRH---GWTVAVMFIDLDRFKIINDTLGHQVGDEMLREVACRLSNLLRE 469 Query: 72 YNIVELLC-------------------DYAPARRFGKAGMELFDLRLHERDDVLQAVFDK 112 + V L +E LH + ++F Sbjct: 470 TDFVARLGGDEFVIILPSISSPADAAIVSGKIISALSTAIEAEGHELHTSPSIGISIFPD 529 Query: 113 GTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTIND 172 + + + +F + +++L ++ Sbjct: 530 DGPDGDIVLKNADTAMYHAKAAGRNNYQFFAADM-NRTAAERLNIERKLRHAIARNELS- 587 Query: 173 HFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAF- 226 F P EA+++ + SP+ + G I A A Sbjct: 588 -LVFQPQFRAEDTTPTGVEALLRWHHPTDGMISPARFIPVAEETGMIVEIGDWVLATACH 646 Query: 227 --TMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISR 284 L I++N+ L D + N + + L E + +E TES V+ Sbjct: 647 EMARWINAGLKPLRIAVNVSARQLRRR-DFCETVANALTTSGLPAELLELEITESSVMEN 705 Query: 285 FDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAI 344 E ++ L G+++AID FG G++ L L F D +KI + + ++ +AI Sbjct: 706 PQEAIHILERLGRMGVTLAIDDFGTGYSSLAYLKLFPIDHLKIDRSFVADIEHDLNDRAI 765 Query: 345 IQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAW 399 I SL + V A GV T ++ L + G + QG LF+K Sbjct: 766 AFGTIALAHSLGLNVIAEGVETEDQHELLRANGCDEVQGFLFSKPLTGAAAFAFL 820 >UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X6V4_METSD Length = 1126 Score = 483 bits (1244), Expect = e-135, Method: Composition-based stats. Identities = 72/406 (17%), Positives = 139/406 (34%), Gaps = 41/406 (10%) Query: 20 IEEMVSIAN-RRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHYN 73 ++E + A R +L + F + + + ++ + + + R + Sbjct: 702 LQERIDQALFRAQRNKTAIAVLFIDLDRFKIINDTLGHQTGDMLLQEAAKRLKECLRETD 761 Query: 74 ---------IVELLCDY--------APARRFGK--AGMELFDLRLHERDDVLQAVFDKGT 114 V L+ D + L L + +V+ Sbjct: 762 TVARQGGDEFVVLVEDCGDTDYLNTIARKIMATLAQPFILVGRELFISASIGISVYPDDG 821 Query: 115 SKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF 174 +R ++ A + + + L++ + F Sbjct: 822 LDTASLLKHADAAMYRAKESGKNTFRFYAAEANTNSVELLT-----LENNLRRAVERNEF 876 Query: 175 --AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFT 227 + P VD S++II EA+V+ SP + G I + Sbjct: 877 VLHYQPKVDLRSQKIIGAEAVVRWQHPELGMLSPMQFIPLAEETGLIIDIGAWIMRESCR 936 Query: 228 M---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISR 284 L + +++NL + + + + + L P+ + +E TES ++ Sbjct: 937 QAVEWQQLTGQNVRVAVNLSARQF-RDETLRQTIADALTESGLTPDCLELEITESMIMHN 995 Query: 285 FDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAI 344 + E ++ G V ID FG G++ L F D +KI + + ++ AI Sbjct: 996 AERAREVLQHFHDLGAHVLIDDFGTGYSSFGYLKHFPIDSLKIDRSFVRDIPDDVDDMAI 1055 Query: 345 IQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 QAII SL+I+V A GV T E+ +L+ G + QG LF++ Sbjct: 1056 TQAIIAMAHSLQIKVVAEGVETQEQLAFLKKQGCDQIQGFLFSEPL 1101 >UniRef50_C6E011 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=C6E011_GEOSM Length = 869 Score = 483 bits (1244), Expect = e-135, Method: Composition-based stats. Identities = 63/417 (15%), Positives = 141/417 (33%), Gaps = 39/417 (9%) Query: 19 KIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHYN 73 ++ + + +A R + + V + + F + + + + + + R + Sbjct: 453 RLGQALELAKRFSSRLAV---IFIDLDRFKNINDSLGHHIGDRLLFQVAGRLQDTIRSAD 509 Query: 74 IVELL-------------------CDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKGT 114 IV L ++ G + L+ + +V+ Sbjct: 510 IVARLGGDEFVVVLPLINSNISAAHAVRKIQQTLSQGYTVESHELNITPSIGISVYPTDG 569 Query: 115 SKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF 174 Q + L + +F + + + +L + + Sbjct: 570 ETVQELMKNADLAMYHAKSAGRNSYQFFTQEM-NLTVQARLVLESDLRTALERDEMM--L 626 Query: 175 AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTAD---LKSKALAF 226 + P +D S ++ EA+++ +P G I + LKS Sbjct: 627 HYQPQIDLKSGEVVGVEALLRWRHPVRGAVAPDVFIPVAEDTGLILSIGEFALKSACEQL 686 Query: 227 TMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFD 286 + + L +++NL + + S L + + A + + +E TES + + Sbjct: 687 ALWISQGLSPLRMAVNLSARQFK-QSNLPSLLADILAATGVAAHLLELEITESSAMDDPN 745 Query: 287 EFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQ 346 +++L+ G+ +AID FG G++ L L F +R+KI + + + I Sbjct: 746 TAIVHLRTLREMGVELAIDDFGTGYSSLSYLKLFPVNRLKIDRSFVRGIDTDSEDAEIAA 805 Query: 347 AIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEKK 403 A I +L +V A GV T + +L ++ QG F++ + + Sbjct: 806 ATIALAHNLGKEVVAEGVETEAQCRFLRGQQCDILQGYFFSEPLSAAGIASYLAANR 862 >UniRef50_A1TX84 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TX84_MARAV Length = 890 Score = 482 bits (1242), Expect = e-135, Method: Composition-based stats. Identities = 72/418 (17%), Positives = 151/418 (36%), Gaps = 39/418 (9%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHY 72 ++E ++ A R +LL + F ++ +G + ++ + + Q R Sbjct: 480 DRLEHAITKATRE---HTKLAVLLLDLDQFKRVNDGLGHKIGDTLIQRVASRMSQCVRDS 536 Query: 73 NIVELL------------CDYAPARRFGKAGME-------LFDLRLHERDDVLQAVFDKG 113 + V L D A + + + + + A+F K Sbjct: 537 DTVARLGGDEFMILSTDIRDERAAATLAQKLLRQFRQKVAINGHEIIASASIGIAMFPKD 596 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 + + +R + ++ + + ++ L + Sbjct: 597 GDNGDELFRNADTAMYRAKDVGRNGFQFYSAEMNNR-MRERLYLEQSLRNAI--GLHQLS 653 Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTM 228 + P +D S + + EA+++ SP + G I A Sbjct: 654 LWYQPKLDLASGSVKSAEALIRWRHPQLGMISPGDFIPIAEETGLILPIGAWVIEEASRQ 713 Query: 229 ---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 E D ++IN+ L + ++ + + L P+ + +E TE+ ++ + Sbjct: 714 LAKWRDQENQDIRVAINISAYQLSH-GKLTDQVIQALDSLGLDPQSLTIEVTETAIMPQM 772 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 D+ ++SL+ GI VA+D FG G++ L L RF D +KI + ++++ AI+ Sbjct: 773 DKAVCELQSLREMGIRVALDDFGTGYSSLTYLKRFPIDILKIDRSFVSDIADDEESGAIV 832 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEKK 403 + II +L + V A GV T + +L + G + QG F K + ++ Sbjct: 833 KTIINLAHNLNMTVVAEGVETEAQLEFLRTNGCDEVQGYYFCKPLPSEECLEFLRCRR 890 >UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=cellular organisms RepID=Q31GH8_THICR Length = 1466 Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats. Identities = 74/435 (17%), Positives = 151/435 (34%), Gaps = 49/435 (11%) Query: 10 HIRDDEPV----------KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP----- 54 H+ +P+ ++ +S A+R N +L + HF + + Sbjct: 1037 HLAHYDPLTGLVNRELLMDRLNHSISTADRNNTPL---ALLFIDLDHFKNVNDTLGHQVG 1093 Query: 55 EEQVKMIYRAICQDPRHYNIVELL----------------CDYAPARRFGKAGMELF--D 96 ++ + + + I + R + + + + +L Sbjct: 1094 DQLLIEVGQRILKILRDEDTIARQGGDEFIVVLPDTGENGAVHVAEKILESISDQLNLKP 1153 Query: 97 LRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADG 156 +L + AV+ + + ++ +F + + I Sbjct: 1154 YKLFITPSIGIAVYPQDGKDADSLLKNADTAMYQAKNDGRNVYRFFTMEMQAHSSRI-MQ 1212 Query: 157 SDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKD 211 + L + P S II EA+++ N SP + Sbjct: 1213 IESALRVALFDQ--QFELYYQPQTCAKSGSIIGVEALIRWNHPEMGPVSPQEFIPVAEQS 1270 Query: 212 GEIYTADLKSKALAFTM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALV 268 G+I A +++NL + D ++ ++ + Sbjct: 1271 GQILAIGWWVLRTAIRQIKIWSEHGKPCIKVAVNLSAVQF-RYEDLPKQVMKILEEEGVS 1329 Query: 269 PEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKIS 328 PE + +E TES ++ + E + L GI ++ID FG G++ L L RF+ ++KI Sbjct: 1330 PEFLELELTESVAMANPEAVIEMMDKLVGHGIKMSIDDFGTGYSSLSYLKRFKVSKLKID 1389 Query: 329 QELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 Q I ++ ++II+AII +L ++ A GV T + +L+ + QG ++K Sbjct: 1390 QSFIRDLAVDSDDRSIIEAIISLSKALGLKTIAEGVETQAQLDFLQEKQCDEIQGFYYSK 1449 Query: 389 AKLNGIPSIAWPEKK 403 L A+ EK+ Sbjct: 1450 -ALTPEAFDAFYEKQ 1463 >UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STH5_PSYIN Length = 962 Score = 481 bits (1240), Expect = e-134, Method: Composition-based stats. Identities = 65/426 (15%), Positives = 143/426 (33%), Gaps = 36/426 (8%) Query: 5 LIYRSHIRDDEPVKKIEEMVS-IANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQV 58 L Y + + ++ V N ++ + +F + + ++ + Sbjct: 520 LAYFDQLTGLPNRRMLQAQVKYRLNMAQSNHQPLTVMFLDLDNFKNINDSLGHTVGDQVL 579 Query: 59 KMIYRAICQDPRHYNIV------------------ELLCDYAPARRFGKAGMELFDLRLH 100 I + I + R + V + + + L Sbjct: 580 IKIAKRIKKAIREVDTVSRLGGDEFIMLFPNTDANAAMHIATTLIQEISKASVVEHNELT 639 Query: 101 ERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKE 160 + A++ + F+ + +R + + + S + Sbjct: 640 ITPSIGIAIYPNDGNDFKTLLKNAETAMYRVKNDSRNGFHFVTPEMQLSA-SRNLQLENA 698 Query: 161 LDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIY 215 L + + P + + +II EA+++ + SP+ G+I Sbjct: 699 LRHALKRNEL--QLYYQPQISTSNGQIIGAEALLRWHHPELGMISPAEFIPIAESSGQII 756 Query: 216 TADLKSKALAFTM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQI 272 A +I++NL + + + ++ + + + L E + Sbjct: 757 EIGEWVLRTAIRQTKNWMDDGFTPMIIAVNLSVVQF-RQKNLLTLITDILAEVQLPNEYL 815 Query: 273 IVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELI 332 +E TE+ + + + + GI ++ID FG G++ L L +F+ ++KI Q I Sbjct: 816 ELELTEAVTMHDPESVINVMNTFHEQGIRMSIDDFGTGYSSLSYLKKFKVYKLKIDQSFI 875 Query: 333 TNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLN 392 ++ +AI+ AII ++L +Q A GV T E+ +L G QG F+K + Sbjct: 876 RDISNDPDDRAIVSAIIDMASNLGLQTIAEGVETAEQLAFLRLHGCHEVQGYYFSKPLPS 935 Query: 393 GIPSIA 398 Sbjct: 936 VEFEQF 941 >UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNA9_9PROT Length = 1399 Score = 481 bits (1240), Expect = e-134, Method: Composition-based stats. Identities = 77/432 (17%), Positives = 155/432 (35%), Gaps = 47/432 (10%) Query: 2 LTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EE 56 LT L RS+++ ++++ ++ A R V ++ + F + + + Sbjct: 976 LTDLPNRSNLQG-----RLDQALASARREGHGRSV-AVMFLDLDRFKNINDTLGHHVGDA 1029 Query: 57 QVKMIYRAICQDPRHYNIVELL-----------CDYAPARRFG-------KAGMELFDLR 98 + + + R ++V L D A R ++ Sbjct: 1030 LLLEVAARLRSSVRDSDVVARLGGDEFVVVLTGADALAAERVAGKILKALSRAYQIEGHA 1089 Query: 99 LHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSD 158 LH + AVF ++ + + +F ++ Sbjct: 1090 LHSTSSIGIAVFPADGESVEVLMQNADAAMYHAKSAGRNNVQFFTASMNEAASD-----R 1144 Query: 159 KELDSCALSPTINDHF--AFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKD 211 ++L+ F + P VD RR+ A EA+++ P+ Sbjct: 1145 RQLEEDLHLALQQKQFVLHYQPQVDAQ-RRVFAVEALLRWQHPHHGLVPPARFVPLAEDT 1203 Query: 212 GEIYTADLKSKALAFTMAHAL----ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANAL 267 G I A A +++N+ +PD V L I + Sbjct: 1204 GLIVPIGQWVLETACAQIKAWSVDARTRKLQVAVNVSARQF-RQPDFVELLRQAIDNSGA 1262 Query: 268 VPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKI 327 P ++ +E TES V+ + + + ++K G++ ++D FG G++ L L+R D++KI Sbjct: 1263 NPARLKLELTESLVLDNVADTIDKMNAIKLLGVTFSMDDFGTGYSSLSYLTRLPLDQLKI 1322 Query: 328 SQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFA 387 + + + ++ I Q I+ SL ++V A GV T + +L+S G + +QG LF+ Sbjct: 1323 DRAFVCRLPENRSDAVIAQTIVTMGRSLGLKVVAEGVETEAQRQFLDSHGCDGYQGFLFS 1382 Query: 388 KAKLNGIPSIAW 399 + Sbjct: 1383 RPLAVDAFEDFL 1394 >UniRef50_Q3A1F4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1F4_PELCD Length = 703 Score = 481 bits (1240), Expect = e-134, Method: Composition-based stats. Identities = 73/418 (17%), Positives = 148/418 (35%), Gaps = 39/418 (9%) Query: 17 VKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLL-----EGPEEQVKMIYRAICQDPRH 71 ++ ++ A R G+ + + F + E + +K + + + Sbjct: 283 LEHCNSSLTQARRNRSPL---GVCIIDIDRFKGVNDTYGYESGDALLKTVSQRLSDCMSR 339 Query: 72 YNIVELLCDYAPARRFGKAGME-------------------LFDLRLHERDDVLQAVFDK 112 +++ L A G + + + +L+ + A+F Sbjct: 340 EDVLARLGSDEFAAVIASVGSQDEFSVLAQKMLHCLTEPIQIGEQKLYCSGGMGIALFPV 399 Query: 113 GTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTIND 172 + + A + + +F + + + L Sbjct: 400 DGVDAEALLKNAATAMHQAKQHGSNNFRFFSKGM-NRMAWERIEIETGLRRALD--LQQL 456 Query: 173 HFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFT 227 + P VD + II EA+++ SP + G I A Sbjct: 457 ALHYQPQVDLKTGHIIGMEALLRWESPELGRVSPMRFIPLAEETGLILPIGNWVLESACR 516 Query: 228 M---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISR 284 H +++N+ + + L I+ + + PE + +E TES ++ + Sbjct: 517 QAKAWHRAGFPSLRMAVNISARQFK-QAGFIDRLDAIIQRSGINPELLEMELTESLIMEK 575 Query: 285 FDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAI 344 DE + +K+ GI +AID FG G++ L L F DRIK+ + + ++ ++ AI Sbjct: 576 SDETLMTLVDIKSRGIKLAIDDFGTGYSMLSYLKHFPIDRIKVDRSFVRDIPENTDDAAI 635 Query: 345 IQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEK 402 +AII SL+I+V A G+ T E+ +L+ E QG F + + ++ Sbjct: 636 TEAIIAMAHSLKIEVIAEGIETREQLAFLKDRACEEGQGYYFGRPVPVETAAEILAQQ 693 >UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8G8_9NEIS Length = 887 Score = 481 bits (1239), Expect = e-134, Method: Composition-based stats. Identities = 69/420 (16%), Positives = 147/420 (35%), Gaps = 40/420 (9%) Query: 16 PVKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPR 70 + ++E + A R V + + F + + +E + I + + Q R Sbjct: 469 ALARLEHALERARRHAFPLAV---MFIDLDRFKTINDSLGHQAGDELLVAIAQRLHQRLR 525 Query: 71 HYNIVELLC--------DYAPARRFGKAGMEL-----------FDLRLHERDDVLQAVFD 111 + + L + AP ++ L + + +++ Sbjct: 526 QEDTLARLGGDEFLVVIEEAPVQQVASIAHALLKVVDQPFGFSGGGEAYVGASIGISLYP 585 Query: 112 KGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTIN 171 + + + ++ + L Sbjct: 586 GDGRSASELIRNADAAMYLAKAQGSNAYRFYTESL-TRAANERLSMETSLRRALRCEEFV 644 Query: 172 DHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAF 226 + P+V+ S R++ E +V+ PS + G I A Sbjct: 645 --LHYQPLVELASGRVLGAEVLVRWQPPGEALVPPSRFIPLAEETGLIVPLGDWVLHEAC 702 Query: 227 TM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVIS 283 L ++++NL P + D V + ++ + L P Q+ +E TE ++ Sbjct: 703 RQGKAWLDAGLP-LLLAVNLSPRQFLRH-DLVGQVRKALQGSGLPPAQLELELTEGALME 760 Query: 284 RFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQA 343 + ++ + + +LK G+S+AID FG G++ L L RF D++KI + + ++ + Sbjct: 761 QAEQAVKTLHALKRLGVSLAIDDFGTGYSSLAYLKRFPLDKLKIDRSFVRDLPRDSSDAE 820 Query: 344 IIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEKK 403 I+ II +L+++ A GV TP++ +L G + QG LF+ + + Sbjct: 821 IVTTIIAMVRNLKLEALAEGVETPQQLAFLRQLGCDSGQGYLFSPPLPAEAFERWLRDGR 880 >UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZT1_9PROT Length = 1301 Score = 481 bits (1239), Expect = e-134, Method: Composition-based stats. Identities = 63/413 (15%), Positives = 129/413 (31%), Gaps = 37/413 (8%) Query: 17 VKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRH 71 +K +R+ +L + HF + + +E + + + + R Sbjct: 887 LKDRAGFAMQMAQRSAHH--LAVLFLDIDHFKNINDTLGHRIGDELLVHLAKRMKLLLRD 944 Query: 72 YNIVELL----------------CDYAPARRFGKAGMELF--DLRLHERDDVLQAVFDKG 113 + + + + + L + A++ Sbjct: 945 EDTLSRFGGDEFILVLPDTDADGAAHVAEKILETVAKTCYIEQHELVVTPSIGIAMYPSD 1004 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 F Y + +R +F + + L Sbjct: 1005 GMDFDKLYQSADVAMYRAKQDGRNNFRFFTSEMQARS-ARRLLLENALRQALSRN--QFE 1061 Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTM 228 + P + +I+ EA+++ SP+ + G I + A Sbjct: 1062 LHYQPQISMQDGKIVGAEALLRWYHPELGSISPAEFIPVAEESGLILSIGEWVLRTAVQQ 1121 Query: 229 ---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 ++INL + + ++ + L P I +E TES + Sbjct: 1122 VKRWQDAGHPPVTVAINLSAVQF-RQARLSELVMQILHEANLAPHWIELELTESVAMDNP 1180 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 + L GI ++ID FG G++ L L +F+ +++KI Q + ++ +AI+ Sbjct: 1181 LVAIGVMNDLHGCGIRMSIDDFGTGYSSLSYLRKFKVNKLKIDQSFVRDLADDIESRAIV 1240 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIA 398 AII +S+ Q A GV T + +L G QG F++ + Sbjct: 1241 TAIITLASSMGFQTIAEGVETAGQLAFLRLQGCNEVQGYYFSRPLTVALFEAF 1293 >UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V1I4_9PROT Length = 935 Score = 481 bits (1239), Expect = e-134, Method: Composition-based stats. Identities = 68/415 (16%), Positives = 147/415 (35%), Gaps = 39/415 (9%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHY 72 +IE+ S A R N + V L + +F + + + +K++ + R Sbjct: 526 DRIEQAFSSAQRNNFKVAV---LFIDLDYFKNINDSLGHDIGDALLKLVAARLKTCLRRS 582 Query: 73 N---------IVELLCDYAPARRF----------GKAGMELFDLRLHERDDVLQAVFDKG 113 + V LL + + L + +L + ++ Sbjct: 583 DTIARLGGDEFVALLSELDSSEEVIFVAEKMIESLTEKFTLGEYQLSITPSIGICIYPDD 642 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 + L ++ ++ L + L + ++ Sbjct: 643 GETSVELLRNADLAMYQAKDDGRNNFKFYSPDMNRKAL-ERLKLETFLRVAIVQQQLS-- 699 Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSK---ALA 225 + P V LS ++ EA+++ SP+ + G I L Sbjct: 700 VYYQPKVSVLSGKMTGMEALLRWQHPELGFISPAVFIPIAEETGLINEIGDWVLRQSCLQ 759 Query: 226 FTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 + A I++NL L + + + ++ ++ L +++E TES ++S Sbjct: 760 ARLWQAQGYDIVPIAVNLSARQLKQD-NFAARVVTILREAGLDAHYLVLEITESMLMSTG 818 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 + + ++ L+ G+ +A+D FG G++ L L D +KI Q + ++ +I+ Sbjct: 819 ESGLQILEQLRDDGVRLALDDFGTGYSSLSRLKNLPLDSLKIDQSFVRDIVTDPNDASIV 878 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWP 400 A +L ++V+A GV T E+ ++ E +QG LF++ + Sbjct: 879 SATAVLAHALNLKVTAEGVETQEQLDFIRMLNCEEYQGYLFSRPIPASEVVKYFL 933 >UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3L4_9PROT Length = 900 Score = 479 bits (1235), Expect = e-134, Method: Composition-based stats. Identities = 75/405 (18%), Positives = 140/405 (34%), Gaps = 32/405 (7%) Query: 11 IRDDEPVKKIEEMVSIANRRNMQSDVTG--ILLFNGSHFFQLLEGPEEQVKMIYRAICQD 68 + D + ++ +R + S G + F G F LLEG +E D Sbjct: 505 LNDTYGHPMGDLLLQQVAKRLVSSVRDGDTVSRFGGDEFVVLLEGFDENPL--------D 556 Query: 69 PRHYNIVELLCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQF 128 +A R + H + +F+ + Sbjct: 557 AASQAETVGEQIFAALR----QPYLIGTHEYHGTSSIGATLFNDKQQSIDELMKQADIAM 612 Query: 129 FRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTIN--DHFAFHPIVDPLSRR 186 ++ +F+ +++ L+ N + VD SR Sbjct: 613 YQAKKEGRNVLRFFDPQMQET-----IAKRTALEGDLRKAIENHQFQLHYQIQVD-ESRH 666 Query: 187 IIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTMAHALEL----GDK 237 EA+++ SP + I A + Sbjct: 667 PFGAEALIRWFHPEHGMVSPDQFIPLAEESDLILPIGYWVLETACARIQRWQHDAKTSGF 726 Query: 238 MISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKA 297 ++S+N+ + D V+ + + I+ + P + +E TES ++ ++ + +LK Sbjct: 727 VLSVNVSAKQF-RQTDFVNQVQSLIQQYEINPSLLKLELTESMLLDNIEDTIATMSALKE 785 Query: 298 AGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEI 357 G+ ++D FG G++ L L R D++KI Q + ++ +AI++ II SL++ Sbjct: 786 LGVKFSLDDFGTGYSSLQYLKRLPLDQLKIDQSFVRDIAVDASDRAIVRTIIAMAHSLDL 845 Query: 358 QVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEK 402 V A GV T E+ L S G + FQG LF K + + Sbjct: 846 DVIAEGVETEEQQKHLSSKGCKNFQGYLFGKPVPIEQFETSLRKS 890 >UniRef50_A7BQZ3 Sensory box/GGDEF family protein n=1 Tax=Beggiatoa sp. PS RepID=A7BQZ3_9GAMM Length = 576 Score = 479 bits (1235), Expect = e-134, Method: Composition-based stats. Identities = 67/422 (15%), Positives = 147/422 (34%), Gaps = 44/422 (10%) Query: 9 SHIRDDEPVKKI-------EEMVSIANRRNMQSDVTGILLFNGSHFFQLLEG-----PEE 56 +++ + +P+ K+ E + R IL + +F + +G ++ Sbjct: 138 AYLANYDPLTKLPNRNLLLERLRQTLGRATRTHQDIAILALDLDNFQMINDGVGHDVGDK 197 Query: 57 QVKMIYRAICQDP-------------------RHYNIVE-LLCDYAPARRFGKAGMELFD 96 + + + + Q N+V+ + M + Sbjct: 198 VLHEVAQRLTQTVSKIGATVARLSGDEFVVIEESDNLVKDVSEMAQGLLDNLSRSMVIDH 257 Query: 97 LRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADG 156 + + +V+ + + + R +F+ + F Sbjct: 258 HEMVVTASIGISVYPSDGEEAAILLKNADTAMARAKAAGKNTYQFFKAEM-NKAAFERLM 316 Query: 157 SDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKD 211 + +L + + + P ++ S +++ EA+++ SP + Sbjct: 317 LENQLRKVLSNNELI--LYYQPQIELSSGQLVGMEALLRWQHPEFGICSPVKFVPVAEEM 374 Query: 212 GEIYTADLKSKALAFTM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALV 268 G I A L +S+N+ + + + + + + L Sbjct: 375 GLIVPIGEWVLRTACQQNQTWQQLGFPPVRVSVNVSSRQFFRD-NLLQIIKEALADSNLN 433 Query: 269 PEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKIS 328 P + +E TES +++ E + ++ G+ +AID FG G++ L L RF D +KI Sbjct: 434 PIYLELELTESVLMAEESGIFELLTEVQNMGVHIAIDDFGTGYSSLSYLKRFPLDVLKID 493 Query: 329 QELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 + + ++ G AI AII SL + V A GV T + +L+ ++ QG F++ Sbjct: 494 RSFVKDICSDGNDAAITTAIIAMAHSLGLSVVAEGVETQGQLTFLQQQHCDVIQGYYFSR 553 Query: 389 AK 390 Sbjct: 554 PI 555 >UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74A79_GEOSL Length = 873 Score = 479 bits (1234), Expect = e-134, Method: Composition-based stats. Identities = 73/414 (17%), Positives = 141/414 (34%), Gaps = 39/414 (9%) Query: 17 VKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRH 71 ++ + V+ A RR + +L+F+ +F + + ++ ++ + I R+ Sbjct: 452 EDRLNQAVAGARRR---GQMVALLMFDLDNFKVVNDTLGHTAGDQLLRSVAARIRSFVRN 508 Query: 72 YNIVELLC-------------------DYAPARRFGKAGMELFDLRLHERDDVLQAVFDK 112 + L R L + + ++F Sbjct: 509 CDTFARLGGDEFVIVLTNLTRMDDAVTVAESFRNLLAMPFFLGGREIFITASMGISLFPD 568 Query: 113 GTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTIND 172 + + +F + + L + Sbjct: 569 DGDTMEALIKKADTAMYHIKESGRNSFQFFAEEMNQK-VNARLTIETGLRRALEKGEML- 626 Query: 173 HFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFT 227 + P ++P + ++ EA+V+ N SP+ G I A A Sbjct: 627 -LHYQPRLEPGTGAVVGMEALVRWNSPDMGLISPADFIPIAEDSGLIVEIGDWVLATACC 685 Query: 228 M---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISR 284 H + +S+N+ V D V ++ I+ + L P + +E TE+ + Sbjct: 686 QALEWHRMGHDSLRVSVNISARQFVGH-DFVDRVVRIIEQSGLSPHFVELELTETALTHN 744 Query: 285 FDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAI 344 DE + + L+ GI+++ID FG G++ L L RF D +KI + I ++ K AI Sbjct: 745 VDETVKIMNRLRERGITISIDDFGTGYSSLNYLKRFPVDVLKIDKSFIDDMVKRREDAAI 804 Query: 345 IQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIA 398 + II + ++V A GV T E+ L E QG F++ Sbjct: 805 VATIIGIAHHMHMKVVAEGVETAEQMKLLMEGNCEEIQGFYFSRPLPPEEFERY 858 >UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K3A1_AZOSB Length = 818 Score = 478 bits (1232), Expect = e-133, Method: Composition-based stats. Identities = 70/430 (16%), Positives = 137/430 (31%), Gaps = 47/430 (10%) Query: 10 HIRDDEPVKKIE-------EMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQ 57 + + + + + R ++ +L + F + + +E Sbjct: 389 RLAHYDALTDLPNRVLLNLRLAHGVERVQRSGEMLAVLFLDIDRFKNVNDSLGHPVGDEL 448 Query: 58 VKMIYRAICQDPRHYN---------IVELLCDYAPARRFGKAGMELFDL----------- 97 + I R + R + V LL A E+ DL Sbjct: 449 LIEIARRLRSRIRAEDTLARLGGDEFVILLDRIRSANDVADFAQEIIDLLNQSFQLASGQ 508 Query: 98 RLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGS 157 + + +++ T + ++ ++ L A Sbjct: 509 EVFVGASIGISLYPLDTDDATQLISNADAALYQAKEAGRNVYRFYTAD-----LTRAAHE 563 Query: 158 DKELDSCALSPTINDHF--AFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRK 210 L++ F F P+V ++ EA+V+ N + P + Sbjct: 564 RLGLEAALRRGLERGEFVLHFQPVVALDKGEVVGAEALVRWNHPTEGMIAPLRFIPLAEE 623 Query: 211 DGEIYTADLKSKALAFTMAHALE--LGDKMISINLLPMTLVNEPDAVSFLLNEIKANALV 268 G I A I++NL D + + + + Sbjct: 624 TGLIVPLGEWVLESACRQGREWLDCGRPLTIAVNLSTRQF-RAGDLTATVRDILDRTGFP 682 Query: 269 PEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKIS 328 + +E TES V+ D + +LK G+ ++ID FG G++ L L RF D +KI Sbjct: 683 AALLELEITESTVMEDADRAVATLAALKGLGVRLSIDDFGTGYSSLAYLKRFAVDALKID 742 Query: 329 QELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 + + ++ + I+ ++ + + V A GV T E+ +L S G E +QG L + Sbjct: 743 RSFVRDIADDENDRMIVATVVAMAHQMRLGVIAEGVETAEQLAFLRSLGCEAYQGYLVGR 802 Query: 389 AKLNGIPSIA 398 + A Sbjct: 803 PQAAADFLGA 812 >UniRef50_Q89HX5 Bll5864 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89HX5_BRAJA Length = 799 Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats. Identities = 82/430 (19%), Positives = 156/430 (36%), Gaps = 40/430 (9%) Query: 9 SHIRDDEPVKKI------EEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQ 57 SH+ + + + E + RR D +L + HF + + + Sbjct: 370 SHMARHDALTGLPNRVLFHEQLEQGLRRTGSGDQLAVLCLDLDHFKDINDSLGHPIGDAL 429 Query: 58 VKMIYRAICQDPRHYNIVELL------------CDYAPARRFG-------KAGMELFDLR 98 +K + R + + V L + A AR A E+ D + Sbjct: 430 LKEVGRRLKATVGESDTVARLGGDEFAVVQIGRSEEAAARCLAGRLVEVISAPYEIDDHQ 489 Query: 99 LHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSD 158 + + ++ + S + L +R +FE + + Sbjct: 490 IVIGVSIGISLSPQDGSNADELLKNADLALYRAKADGRGTYRFFETGMDARA-QARRLLE 548 Query: 159 KELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGE 213 +L + + PI D S R++ FEA+++ N P + G Sbjct: 549 MDLRAALQR--DEFQPYYQPIRDVASGRVVVFEALLRWNHPQRGLIAPINFIPLAEETGL 606 Query: 214 IYTADLKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQII 273 I A T A D +++NL P+ N P+ ++ + + + L ++ Sbjct: 607 IVQLGEFVLRSACTDAATWP-DDVDVAVNLSPVQFRN-PNLIASVTAALTVSGLPARRLE 664 Query: 274 VEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELIT 333 +E TES ++ + + L+A G+ +++D FG G++ L L F D+IKI + ++ Sbjct: 665 LEITESVLLQNSEATLTTLHELRAMGVRISLDDFGTGYSSLSYLRSFPFDKIKIDRSFVS 724 Query: 334 NVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNG 393 + AII+A+ SL I +A GV + L G QG LF+K + Sbjct: 725 ELATREDSMAIIRAVTGLGRSLGIVTTAEGVENDAQLELLRREGCTQAQGYLFSKPRPAS 784 Query: 394 IPSIAWPEKK 403 ++ + Sbjct: 785 DVALMLERPR 794 >UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMA7_9GAMM Length = 932 Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats. Identities = 74/418 (17%), Positives = 142/418 (33%), Gaps = 43/418 (10%) Query: 17 VKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRH 71 +++E +S A Q V L + F + + ++ + + + Q Sbjct: 519 EERLENALSDAKSHQWQLAV---LFIDLDRFKLVNDTLGHHEGDQLLVEVANRLHQVIGA 575 Query: 72 YNIVE---------LLCDYAPARRFGKA----------GMELFDLRLHERDDVLQAVFDK 112 + V +L + A + ++L + + A++ + Sbjct: 576 NDTVARLGGDEFVIVLNEIAGSTEINGVIEDIQQNFKPAVKLALQDMFVTPSIGVAIYPE 635 Query: 113 GTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTI-- 170 + + + YF + L + L++ Sbjct: 636 DGETPVQLMKNADAAMYHAKASGRNCAQYF-----NRSLDDSLKERISLENALNQALKLG 690 Query: 171 NDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKAL- 224 + P +D S RII EA+++ N SP A + G I Sbjct: 691 QFELYYQPQLDVKSNRIIGAEALIRWNHPEKGMISPDAFIPLAEESGLIVDIGSWVLHQA 750 Query: 225 --AFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVI 282 +S+NL + + E + + I+ + + +E TES ++ Sbjct: 751 SSQLAQWRKQGFDQLSVSVNLSALQVQKES-FAREVADVIREYGVPEACLDLELTESMIM 809 Query: 283 SRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQ 342 +E A+ + GI +++D FG G++ L L RF D++KI + + ++ Sbjct: 810 RNAEETIAALDKIHNLGIQISVDDFGTGYSSLSYLKRFPLDKLKIDRSFVQDITVDTDDA 869 Query: 343 AIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWP 400 I + II +L +QV A GV T + L G E +QG LFAK + Sbjct: 870 MICKTIISMAHNLNLQVIAEGVETNAQLELLRDYGCEQYQGYLFAKPLPVEQMTEHLL 927 >UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria RepID=Q1NRJ4_9DELT Length = 1052 Score = 477 bits (1230), Expect = e-133, Method: Composition-based stats. Identities = 66/418 (15%), Positives = 140/418 (33%), Gaps = 40/418 (9%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDP--- 69 ++++ ++ A R +L+F+ F ++ + + + + + + Q Sbjct: 640 DRLQQAMARARRE---EHKVALLIFDLDRFKEVNDSLGHSVGDLVLTEVAQRLRQQLSLA 696 Query: 70 ----------------RHYNIVELLCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKG 113 R +I + + D +L+ + +F Sbjct: 697 DTICRPGGDEFYLLLGRLTDIDTAVQAAQNVLELFSKPFQAADHQLYLTPSIGITLFPDD 756 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 + + + +F+ + L L Sbjct: 757 GEEVESLIQSVETAMYHAKKDGGNSFQFFQETMFTAALG-RMTMKNRLRRAVE--LEEFE 813 Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNED------SPSAIAVGQRKDGEIYTADLKSKALAFT 227 + P + R ++ EA+++ + SP+ + G I A Sbjct: 814 LYYQPKIAADGRTVVGAEALIRWVQPERGGPVSPAEFIPLAEETGLIIPIGEWVLRQACR 873 Query: 228 M---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISR 284 L I++NL + +P + ++ L E + +E TES ++ Sbjct: 874 QSLLWQQAGLPPLRIAVNLSAVQFK-QPGLDDEINWILQEIGLPAELLELEITESLLMED 932 Query: 285 FDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAI 344 + LK GI +A+D FG G++ L L F D +KI +E + ++ +A+ Sbjct: 933 VTTANATLWKLKDMGIHLALDDFGTGYSSLSYLKNFPLDTLKIDREFVRDLSTDDEDRAV 992 Query: 345 IQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEK 402 I II SL+++V A GV ++ +L G ++FQG F++ + Sbjct: 993 IITIITLAHSLKMEVVAEGVEDADQVAFLRQRGCDVFQGYHFSRPLPAKEFEQFLRSQ 1050 >UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Leptospirillum sp. Group II RepID=B6AQA1_9BACT Length = 702 Score = 477 bits (1230), Expect = e-133, Method: Composition-based stats. Identities = 70/419 (16%), Positives = 150/419 (35%), Gaps = 41/419 (9%) Query: 20 IEEMVSIANRRNMQS-DVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHYN 73 +E+ V A R + + F + + ++ ++ + R + + Sbjct: 278 LEDRVDQAIRHARGVDGAFSVFFLDVDRFKPINDSLGHSTGDKVLQQMARRLSGTVGPED 337 Query: 74 IVELL-------------------CDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKGT 114 V + R ME+ L + ++F Sbjct: 338 TVARIGGDEFVIVFPEQKDPGKVHEIARKIRDCVAENMEVDGQSLSVTTSIGISLFPHDG 397 Query: 115 SKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF 174 + F+ + + Q ++ DS E+++ + F Sbjct: 398 TTFRTLLASADSAMYYAKSKGSGQIQFYSGELNDSA-----ALRIEMENDLRRGIEKEEF 452 Query: 175 --AFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFT 227 + P V + + + EA+V+ N P + G I A Sbjct: 453 VLYYQPKVTLATGEVESVEALVRWNHPEKGILPPHYFIPRAEETGLIIPLGRWIMDRACR 512 Query: 228 M---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISR 284 +++NL + +N+ D + +L+ ++++ L PE + +E TES ++ Sbjct: 513 EAVIWQQAGFSRLRVAVNLSALQFINQ-DLMKEILDALESSGLPPECLELEITESLLMED 571 Query: 285 FDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAI 344 + + ++ G+ VAID FG G++ L +F DR+KI + IT++ + AI Sbjct: 572 PEGAMRTLSGIRQKGVHVAIDDFGTGYSSFSYLKKFPLDRLKIDRSFITDICDNPNDAAI 631 Query: 345 IQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEKK 403 ++ II +L ++V A GV + + L++ + +QG ++ G + E + Sbjct: 632 VRTIITLGHNLNLKVIAEGVESQAQLEMLKAMECDAYQGFFNSRPLPPGELAERLKEMR 690 >UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GMU1_THISH Length = 862 Score = 477 bits (1230), Expect = e-133, Method: Composition-based stats. Identities = 68/429 (15%), Positives = 135/429 (31%), Gaps = 43/429 (10%) Query: 10 HIRDDEPVKKI-------EEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQ 57 H+ + +PV + + + + +L + F + + +E Sbjct: 437 HLANFDPVTGLPNRTLFKDRLQHALANATRNQRLVALLFLDMDQFKNVNDSLGHMMGDEL 496 Query: 58 VKMIYRAICQDPRHYNIVE---------LLCDYAPARRFG----------KAGMELFDLR 98 ++ + R + V LL + + + + L + Sbjct: 497 LRQTAERLLGCVREGDTVARFGGDEFIILLENIEHSEQASLSAERVVQAMRRPFRLGEHE 556 Query: 99 LHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSD 158 + +++ + + + ++ + Sbjct: 557 HFCNVSIGISLYPEDDEHPEDLVRHADSAMYLAKAQGGAGYRFYTPDMNTRAM-ERLLLQ 615 Query: 159 KELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGE 213 +L + P +D S RI EA+V+ P+ G Sbjct: 616 NQLHQALELG--QFQVHYQPQMDLRSGRICGVEALVRWQHPERGLVPPAEFIPMAEDTGL 673 Query: 214 IYTADLKSKALAFTM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPE 270 I A L +S+NL P PD + + + L E Sbjct: 674 IEPLGEWVLRTAAREVRGWQDRGLPALNLSVNLSPRQF-RHPDLPGMVERVLAESGLEAE 732 Query: 271 QIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQE 330 ++ +E TE +I + + + + G+ V+ID FG G + L L R +KI +E Sbjct: 733 RLELEITERLIIVDLEHTVDTLSRIARLGVRVSIDDFGTGHSSLAYLKRLPVHALKIDRE 792 Query: 331 LITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 + + + AI +A+I +L +QV A GV T E+ +L G + QG A+ Sbjct: 793 FVDGIGQDSDDAAIAEAVIALGRTLRLQVIAEGVETREQASFLREHGCDAVQGFFIARPM 852 Query: 391 LNGIPSIAW 399 G + Sbjct: 853 PAGELTGWL 861 >UniRef50_Q1K1R0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K1R0_DESAC Length = 709 Score = 477 bits (1229), Expect = e-133, Method: Composition-based stats. Identities = 65/388 (16%), Positives = 133/388 (34%), Gaps = 36/388 (9%) Query: 37 TGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPR-------------------HY 72 +L + F + + ++ ++ + + + + R Sbjct: 309 LALLYLDLDRFKNINDTLGHTVGDQVLQEVAQRLQNNIRITDNLSRMSGDEFLITLDPAD 368 Query: 73 NIVELLCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTF 132 N+ E+ M++ R H + ++F + + +R Sbjct: 369 NLSEVTQLAQKFLSVISVPMKIEHHRFHLTASIGISLFPGDATSPEKLLSCADSAMYRAK 428 Query: 133 VLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEA 192 + +++ + + EL + + P D + +++ EA Sbjct: 429 ESGRDAFRFYKPHMNEKA-QGLLWLETELRLAIEQEQL--ELHYQPQYDLNTGQLVGMEA 485 Query: 193 IVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTM---AHALELGDKMISINLL 244 +V+ N P + I A HA+ + +++N+ Sbjct: 486 LVRWNHPEKGMIPPGEFIPQAEETSLIIPLGEWVLNTACRQIAAWHAMGISPIRMAVNIS 545 Query: 245 PMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAI 304 + D + + L + +E TES ++ + AE + L A GI ++I Sbjct: 546 AVQFYR-IDLAQMVAKLLDHYGLPATLLELEITESVLMDDVEAAAETMNKLTAMGIQLSI 604 Query: 305 DHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGV 364 D FG G++ L L RF +KI + I +V + AI +II + I+V A GV Sbjct: 605 DDFGTGYSSLSYLKRFPISTLKIDRSFINDVTINEQDAAIALSIISLAGHMGIEVLAEGV 664 Query: 365 ATPEEWMWLESAGIEMFQGDLFAKAKLN 392 T E+ +L+ + QG LF + Sbjct: 665 ETVEQLSFLQRHACQYGQGYLFNRPLPA 692 >UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Oxalobacter formigenes RepID=C3X2S2_OXAFO Length = 1049 Score = 477 bits (1228), Expect = e-133, Method: Composition-based stats. Identities = 70/405 (17%), Positives = 138/405 (34%), Gaps = 42/405 (10%) Query: 23 MVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHYNIVEL 77 +S+A RR+ ++ + +F + + +E +K + + R + + Sbjct: 640 AISLAQRRHEPL---ALMFLDLDNFKNVNDSLGHGVGDELLKQFSQRLVNAVREQDTISR 696 Query: 78 L----------------CDYAPARRFGKAGME--LFDLRLHERDDVLQAVFDKGTSKFQL 119 L Y R A + + ++ + A++ + F Sbjct: 697 LGGDEFVLVLPGTDTDGAAYLAERLLNIAARQYNIERHEINLTVSIGIAMYPTDGTDFDT 756 Query: 120 TYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF--AFH 177 + +R +F + ++D+ + F + Sbjct: 757 LWRSADAAMYRAKQSGRNDYCFFTTEMQARSARTL-----QIDNALRRALERNQFSLVYQ 811 Query: 178 PIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSK---ALAFTMA 229 P + + RI+ FEA+++ P +G+I + Sbjct: 812 PQLSLNTNRIVGFEALIRWTHPQFGNTPPDEFIPIAESNGQIIPIGEWVLKTAVRQLRLW 871 Query: 230 HALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFA 289 L D IS+NL + P ++ ++ + PE + +E TE + Sbjct: 872 QDNGLKDVTISVNLSAVQF-RHPRLPELVMAILEEAGVSPECLQLELTEGVAMENPLAAI 930 Query: 290 EAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAII 349 I L+ GI ++ID FG G++ L L RF +KI + + ++ AI+ A+I Sbjct: 931 TVIDELRKKGIRISIDDFGTGYSSLTYLKRFNVYSLKIDRSFVQDLPNDTEDMAIVSAVI 990 Query: 350 KCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGI 394 SL + A GV T E+ +L S G QG ++ Sbjct: 991 SLADSLGMITVAEGVETKEQLEFLRSRGCTEIQGYYLSRPLQADA 1035 >UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MBX5_9PROT Length = 891 Score = 476 bits (1227), Expect = e-133, Method: Composition-based stats. Identities = 67/404 (16%), Positives = 137/404 (33%), Gaps = 37/404 (9%) Query: 20 IEEMVSIANRRNMQSDV-TGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHYN 73 + + + + + +L + HF + + + +K + + R+ + Sbjct: 466 LRDRIEQVLVHDTRLQRQMAVLFIDLDHFKTINDSLGHEIGDLLLKAVADRLKSCVRNED 525 Query: 74 IVE---------LLCDYAPARRFGKAGMELFDL----------RLHERDDVLQAVFDKGT 114 V +L A + K ++ D LH + AVF Sbjct: 526 TVARQGGDEFIVVLNSIAESLDAAKVAQKILDSFALPFHIHKNELHIDGSIGIAVFPDDG 585 Query: 115 SKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF 174 + + + + +F S + +L + Sbjct: 586 VNAETLLKNSDVAMYHAKKNGRNNYQFFTDELNKSA-YERHILGLDLRYALERNELL--L 642 Query: 175 AFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSK---ALAF 226 + P++D S + EA+++ P + G I L Sbjct: 643 YYQPVMDMPSHNLYGVEALLRWRHPEQKLITPDKFINLAEETGLIIPIGEWVIRTVCLQI 702 Query: 227 TMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFD 286 ++INL + D + + + + + I +E TES +I + Sbjct: 703 KAWQEQGFYVPRVAINLSARQF-RDKDLIKNISRILSETGVKAKHIALEITESMLIDNIE 761 Query: 287 EFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQ 346 + E + L A G+ ++ID FG G++ L L +F +KI + + ++ + I+ Sbjct: 762 KVVETLNRLDAMGLHISIDDFGTGYSSLSYLKQFPIHTLKIDRSFVRDLVTDKNDRTIVA 821 Query: 347 AIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 AII SLE++V A G+ E+ +L + +QG F+K Sbjct: 822 AIIAMAHSLEMEVIAEGIEIEEQLDFLVTQKCNHYQGYYFSKPV 865 >UniRef50_A8FYM5 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FYM5_SHESH Length = 1055 Score = 476 bits (1227), Expect = e-133, Method: Composition-based stats. Identities = 75/414 (18%), Positives = 143/414 (34%), Gaps = 44/414 (10%) Query: 20 IEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEG-----PEEQVKMIYRAICQDPRHYNI 74 + + A R Q V + + HF + + + ++ + + R ++ Sbjct: 639 MNTALERAKRSKTQMAV---MFIDLDHFKMINDTSGHPVGDLLLQQVAERFKRALRKEDV 695 Query: 75 VELL----------------CDYAPARRFGK---AGMELFDLRLHERDDVLQAVFDKGTS 115 + AR+ +L + + VF Sbjct: 696 ISRFGGDEFTVLLSNTRTDNATTVVARKLLACFYEPFKLPSSEVVISASIGIGVFPDNGD 755 Query: 116 KFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF- 174 + +R ++ EL+ D F Sbjct: 756 SVDSLMMNADSAMYRAKEKGRNCFQFYTKEMNQYA-----QERLELELDLRKALERDEFV 810 Query: 175 -AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKS---KALA 225 + P DP + RII EA+++ SP G I + Sbjct: 811 LHYQPQFDP-NGRIIGCEALIRWQHPDKGLLSPGEFINMAEITGLIVPIGKWVIDTACMQ 869 Query: 226 FTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 M + IS+NL ++ D + + N I + + P + +E TES ++ Sbjct: 870 HKMWLSQGYPALNISVNLSGRQFLHH-DLLETVKNAITTSGITPSCLELELTESIMMVNV 928 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 +E + ++ + GI ++ID FG G++ + L RF +++KI Q + + + AI+ Sbjct: 929 EETIRTLNAISSLGIHMSIDDFGTGYSSMSCLKRFPVNKLKIDQSFVRGLPQDKEDVAIV 988 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAW 399 ++II +L + V A GV T E+ +L+S+ E FQG F++ L Sbjct: 989 KSIIVMAHALNLTVIAEGVETLEQLEFLKSSRCEEFQGYYFSRPILAADIEQYL 1042 >UniRef50_B1ZGT4 Diguanylate cyclase/phosphodiesterase n=6 Tax=Methylobacterium RepID=B1ZGT4_METPB Length = 574 Score = 476 bits (1227), Expect = e-133, Method: Composition-based stats. Identities = 72/415 (17%), Positives = 149/415 (35%), Gaps = 41/415 (9%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHY 72 +++ ++ A R + V L+ + F + + + ++ + + + R Sbjct: 156 DRLDAALAEAARTDAPLAV---LMLDLDRFKAVNDTLGHPVGDALLRKVAERLRKATRSG 212 Query: 73 NIVELL----------------CDYAPARRFGKAGMEL-------FDLRLHERDDVLQAV 109 ++V L A + ++L L+ V A+ Sbjct: 213 DVVARLGGDEFAIIQGGPSSGAEQPQAAEALARRLVDLVGRTYVVDGHMLNVGVSVGVAL 272 Query: 110 FDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPT 169 L +R +FE ++ + + +L Sbjct: 273 SPADGRNADDLLKHADLALYRAKAEGRGTHRFFEPAM-NAQMQARRSLEIDLRRAL--AL 329 Query: 170 INDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKAL 224 AF P + + +I+ FEA+++ N SP+ + G I + Sbjct: 330 KQFDLAFQPQIQLETGQIVGFEALLRWNHPERGPVSPALFIPLAEEIGLIVGIGEWALRT 389 Query: 225 AFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISR 284 A A I++NL P+ V +++ + L P ++ +E TE ++ Sbjct: 390 ACREAAGW-TQPASIAVNLSPVQF-RGGRLVETVMHVLAQTGLDPARLELEITEGALLEN 447 Query: 285 FDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAI 344 D + + L+A G+ +++D FG G++ L L +F D+IKI Q + + + AI Sbjct: 448 TDSVLDVLNGLRALGVKISMDDFGTGYSSLSYLQKFPFDKIKIDQSFVRGMEGNAECGAI 507 Query: 345 IQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAW 399 ++AI + SL ++ +A GV T + + + G QG L + + Sbjct: 508 VRAIARLGASLGMRTTAEGVETATQLDAIRAEGCTEVQGYLTGRPMPAAQAAALL 562 >UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PKJ2_CELJU Length = 798 Score = 476 bits (1227), Expect = e-133, Method: Composition-based stats. Identities = 69/417 (16%), Positives = 146/417 (35%), Gaps = 39/417 (9%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHY 72 ++E ++ R Q + GIL + F + + ++ ++ + + + R Sbjct: 375 DRLEMAITQVRR---QGEKLGILFIDLDRFKNVNDSLGHGVGDQILQEAAKRLTANVRTG 431 Query: 73 NIVELL-------------------CDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKG 113 + V L R + + + LH + AV+ Sbjct: 432 DTVSRLGGDEFVVLFPRVRTEGNLADLTIKLREQLQLPYTVDGISLHITPSIGIAVYPDD 491 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 + + ++ L + +L S + + Sbjct: 492 GEDPNTLIKNADAAMYLAKEKGRNNYQFYTPTLNAKTLD-RLKLESDLRSAIDAG--DFE 548 Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNE-----DSPSAIAVGQRKDGEIYTADLKSKALAFTM 228 + P + S ++ EA+++ SP+ + G I A Sbjct: 549 LHYQPQIIGSSGQLWGLEALIRWRHRERGLISPAEFIPLAEETGLIVGLGDWVLVQAVKQ 608 Query: 229 ---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 ++S+N+ + + D + + + ++ LVP+ I +E TE+ ++ Sbjct: 609 LAEWRRQGHNHLVVSVNISALQF-RQGDFLDRVKHILQEAQLVPDAIELELTETMLMQDV 667 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 + +K L+ G +AID FG GF+ L L + +KI Q + + + AI+ Sbjct: 668 QSAIQTLKGLRELGFRIAIDDFGTGFSSLNYLRHLPINVLKIDQSFVREMLQEPESLAIV 727 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEK 402 ++II +L + A GV T E+ L++ G + QG FA+ I + ++ Sbjct: 728 ESIIALAQALGKETIAEGVETRAEFDVLQARGCRLMQGYFFARPMPPVIFDQWYQQQ 784 >UniRef50_A5GBG4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=A5GBG4_GEOUR Length = 709 Score = 476 bits (1226), Expect = e-133, Method: Composition-based stats. Identities = 62/415 (14%), Positives = 137/415 (33%), Gaps = 40/415 (9%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHY 72 + + ++ A+R N + +L + F + + ++ ++ + + R Sbjct: 286 ELMHLALAQAHRHNR---LLAVLFLDLDRFKHINDTLGHTVGDQLLQASAHRLKECCRRD 342 Query: 73 --------------------NIVELLCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDK 112 ++ E + L D+ L + ++F Sbjct: 343 RDTVARRGGDEFIILLPDIDDVQEAVRVAQKIIDAFTQVFVLPDIELFISTCIGISIFPN 402 Query: 113 GTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTIND 172 + + + +R + + ++ F + L + Sbjct: 403 DGRDTETLIKNADMAMYRAKEQGRSRYHLYTSSMDEQA-FRRLTMENSLRKALQREEFS- 460 Query: 173 HFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFT 227 + P V+ + +I+ EA+V+ P+ G I A Sbjct: 461 -LYYQPKVNIKTGQIVCLEALVRWQNPEMGLILPNQFIPLAEDTGLIIPLGEWVLRTACA 519 Query: 228 M---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISR 284 L +++N P +P + + L P + +E TE+ ++ Sbjct: 520 QNKTWQLLNYPPMRVAVNFSPRQF-QQPRLTDMVEQILGEADLAPCWLELELTENVMLQN 578 Query: 285 FDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAI 344 ++ + + L GI ++ID FG G++ L + + +KI + + +++ + AI Sbjct: 579 VEKTVQTLNRLSNLGIHISIDDFGTGYSSLSYIKKLPIQTLKIDRSFVHDINTNADDAAI 638 Query: 345 IQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAW 399 A+I SL + V A GV T E+ L+ QG LF+K + Sbjct: 639 AIAVITMAQSLRLNVIAEGVETLEQMKLLDGLNCPEMQGYLFSKPLPVAEMTTLL 693 >UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5S9_AZOSB Length = 1090 Score = 475 bits (1225), Expect = e-133, Method: Composition-based stats. Identities = 67/431 (15%), Positives = 133/431 (30%), Gaps = 45/431 (10%) Query: 7 YRSHIRDDEPVKKIEEMVSIAN----RRNMQSDVTGILLFNGSHFFQLLEGP-----EEQ 57 Y +H + ++ A + +L + +F + + + Sbjct: 661 YLAHYDSLTGLPNRSAWMNQARSALSLAQRHQHILAVLFLDLDNFKTVNDSLGHPVGDRL 720 Query: 58 VKMIYRAICQDPRHYN---------IVELLCDYAPARRFGKA----------GMELFDLR 98 + + + + R + V LL A + + D Sbjct: 721 LAAVAQRLAHCLREEDSFARLGGDEFVALLPRVTRAEDAAAVARKMLDALATPVVIDDHE 780 Query: 99 LHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSD 158 L + ++F + + + +F L Sbjct: 781 LAPSVSIGISLFPSDGTDVDTLLKHADTAMYGAKEVGRNNFQFFVPEMNTRAL-----ER 835 Query: 159 KELDSCALSPTINDHF--AFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKD 211 L++ + + P V S R EA+V+ P+ Sbjct: 836 LLLENALRRAIERNELTLHYQPQVAATSDRPNGCEALVRWQHPDFGLVPPAQFIPIAEDS 895 Query: 212 GEIYTADLKSKALAFTM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALV 268 G I A L M+ +N+ + D V ++ + Sbjct: 896 GLIVPLGEWVLREACRQQVKWARSGL-HLMVGVNISALQF-RRADFVDSVVQVLAETGAN 953 Query: 269 PEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKIS 328 PE+I +E TES ++ D + ++ L G+S+A+D FG G++ L L R R+KI Sbjct: 954 PERIELEITESALMDASDALSRRLRELANMGLSLALDDFGTGYSSLAYLKRLPIGRLKID 1013 Query: 329 QELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 + + ++ A+ A + L ++V A GV T + +L + G QG L+++ Sbjct: 1014 RSFVKDLPGDPEDAAVTAATLSLARDLGLEVVAEGVETVAQRDFLVARGCHTLQGYLYSR 1073 Query: 389 AKLNGIPSIAW 399 Sbjct: 1074 PLDVAAFEAWM 1084 >UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacterium BLR9 RepID=C0INC4_9BACT Length = 765 Score = 475 bits (1224), Expect = e-132, Method: Composition-based stats. Identities = 66/414 (15%), Positives = 137/414 (33%), Gaps = 39/414 (9%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHY 72 ++ + +S+A R+ Q V L + F + + ++ ++ + + R Sbjct: 350 DRLRQAISLARRQGKQLAV---LFVDIDRFKHINDSLGHGMGDKALQSMAERLTTCVRAS 406 Query: 73 NIVE---------LLCDYAPARRFG----------KAGMELFDLRLHERDDVLQAVFDKG 113 + V LL + A + L + + Sbjct: 407 DTVARQGGDEFVILLAEVTTADDAAIVAKKILSAVALPHRIGRHELQISASIGISTCPND 466 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 + + ++ +F + L + L Sbjct: 467 ADDAETLIKHADIAMYQAKEKGRNNYQFFRADMNERVLQ-RQSLESSLRLALERQEFL-- 523 Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTM 228 + P ++ + I EA+++ P++ G + A Sbjct: 524 LHYQPKMNLETGHITGMEALIRWRHPELGLVPPASFIGVAEDCGLMQPIGRWVLQEACRQ 583 Query: 229 AHAL---ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 L +++N+ + +++ ++ L P + +E TE+ ++ Sbjct: 584 VKEWMVAGLNPVPVAVNVSAVEF-RRKHFFDGVISTLRETDLDPRYLELELTETVLMKEA 642 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 + + +LK+AG+ +AID FG G++ L L+R D +KI + +T+V AI+ Sbjct: 643 EPTIAVLHALKSAGVKLAIDDFGTGYSSLSYLTRLPVDTLKIDRSFVTDVTTRTDNAAIV 702 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAW 399 AII SL + V A GV T E+ L S QG F++ + Sbjct: 703 SAIIGMGKSLNLNVIAEGVETQEQLALLRSHCCAEGQGYYFSRPVSVPAVAELL 756 >UniRef50_Q89VU0 Bll0955 protein n=2 Tax=cellular organisms RepID=Q89VU0_BRAJA Length = 955 Score = 475 bits (1223), Expect = e-132, Method: Composition-based stats. Identities = 73/421 (17%), Positives = 151/421 (35%), Gaps = 41/421 (9%) Query: 9 SHIRDDEPVKKI-------EEMVSIANRRNMQSDVTGILLFNGSHFFQLLE-----GPEE 56 +H+ + + + E+M N+ + +L F+ +F + + + Sbjct: 526 AHMARHDSLTDLPNRTLFREKMGEGLNQVAIAGGAMAVLCFDLDNFKTVNDRLGHAAGDR 585 Query: 57 QVKMIYRAICQDPRHYNIVELLC-----------DYAPARRFGKAGMELFDL-------R 98 ++ + + ++ ++ V L A + + +E+ Sbjct: 586 LLRWVAARLKENVGEHDTVARLGGDEFAVLQRGPQPQSAEKLARRLVEIIGHPPPLESQS 645 Query: 99 LHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSD 158 +H V A+ L ++ FE E+ + Sbjct: 646 IHVGVSVGIAIAPDHGLDADELMKCADLALYQAKARGRGAYQLFEPEMEEEARSRH-ALE 704 Query: 159 KELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGE 213 L H F P V S + FEA+++ S P+ ++G Sbjct: 705 HNLRGALE--AREFHLVFQPQVRLESSELTGFEALLRWKHPSRGFVSPAEFIPIAEENGL 762 Query: 214 IYTADLKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQII 273 I A A + D +++NL P+ + + + + L P+++ Sbjct: 763 IVPIGEWVLRTACATAASW--PDVTVAVNLSPVQF-RARGLAAMVTSALAEAGLPPQRLE 819 Query: 274 VEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELIT 333 +E TE+ ++ + E + L+A G+ V++D FG G++ L L +F DRIKI + + Sbjct: 820 LEVTETALLDDSEATIEILHQLRALGVRVSLDDFGVGYSSLSYLRKFPFDRIKIDRSFVG 879 Query: 334 NVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNG 393 + +S AI++ I + L ++ +A GV T E+ ++ G QG F + Sbjct: 880 TLGESPESVAIVRTIASLGSVLGVETTAEGVETEEQLDFVRECGCTAVQGYYFGRPCPAA 939 Query: 394 I 394 Sbjct: 940 E 940 >UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z192_9NEIS Length = 943 Score = 475 bits (1223), Expect = e-132, Method: Composition-based stats. Identities = 86/431 (19%), Positives = 154/431 (35%), Gaps = 44/431 (10%) Query: 1 MLTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----E 55 +LT L R+HI+D ++E + A R N + + L + F + E + Sbjct: 511 VLTGLPNRAHIQD-----RVELAIQNATRDNERLALL---LLDLDRFKTINESLGHSAGD 562 Query: 56 EQVKMIYRAICQDPRHYNIVE------------LLCDYAPA-------RRFGKAGMELFD 96 ++++ I +V L+ D A R + +ELF+ Sbjct: 563 ALLQVLAERIRSTLLTGEVVARQGGDEFIVLLPLIADPGSAALAAERIREVLEPPVELFN 622 Query: 97 LRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADG 156 + + +VF F+ + + ++ I + Sbjct: 623 HSISITPSIGISVFPDDGRDFETLVRNADAAMYHAKSAGRNSYKFYTADLNARAREILE- 681 Query: 157 SDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKD 211 + +L + P VD + II EA+++ P + Sbjct: 682 IESQLRYALDRDEFV--LHYQPQVDLKTGEIIGAEALIRWQHPELGLLGPVRFIEVAEER 739 Query: 212 GEIYTADLKS---KALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALV 268 G I L +++NL + + D L + A+ LV Sbjct: 740 GFIVQIGNWVIQEACRQLAQWRRQGLPRISLAVNLSTLQF-RQQDLAVHLQRALSAHGLV 798 Query: 269 PEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKIS 328 + VE TES ++ + I +K+ G+ ++ID FG G++ L L RF+ D++KI Sbjct: 799 GSDLDVEVTESVIMDDVETTIHTIDRIKSMGLQLSIDDFGTGYSSLSYLKRFKADKLKID 858 Query: 329 QELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 + + ++ AI +AII +L + V A GV T E+W +L+ G QG L AK Sbjct: 859 RSFVRDIPMDADDSAIARAIINMAKNLNMTVIAEGVETIEQWKFLDREGCHAAQGYLLAK 918 Query: 389 AKLNGIPSIAW 399 Sbjct: 919 PVPAKEFERLL 929 >UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBG1_BREBN Length = 805 Score = 475 bits (1223), Expect = e-132, Method: Composition-based stats. Identities = 72/418 (17%), Positives = 144/418 (34%), Gaps = 39/418 (9%) Query: 17 VKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRH 71 +++++++ A + + Q +L + HF + + + ++ + + Sbjct: 393 EQQLDQVIMEAQKTDQQV---YVLFLDLDHFKLVNDSLGHDFGDLLLQEASLRLRECVGK 449 Query: 72 YNIVELL--------------CDYAPARRFGKAGME----LFDLRLHERDDVLQAVFDKG 113 V L + + +E + L+ + + + + Sbjct: 450 KGTVYRLGGDEFMVILTDVTEREVSSMANEINETIEQAFFIHGHELYITTSIGISRYPED 509 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 + + + + E + EL+ Sbjct: 510 GQDRSVLMRNADAAMYAAKDKGKNSFHLYVPNLEQ-AVNDKMNIQNELNRALARQEFL-- 566 Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTM 228 + P V S I+ EA+++ + P + G I A Sbjct: 567 LHYQPQVSAKSGAIVGVEALIRWDHPERGLLLPDQFISVAEETGLIVPIGEWVLRTACKQ 626 Query: 229 ---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 L +++NL + + D + + L PE + +E TES +I Sbjct: 627 NKQWQDQGLKPLRVAVNLSARQFLKQ-DFTQMIAEILHQTRLAPEYLELEITESSMI-DV 684 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 +A+K LK G+ VAID FG G++ L L F +R+KI + + ++ + QAI+ Sbjct: 685 HRATQALKELKQLGVHVAIDDFGTGYSSLYYLKEFPLNRLKIDRSFVRDMIEQPSNQAIV 744 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEKK 403 II L++ V A GV T EE +L+ E QG LF++ + + +K Sbjct: 745 STIISMAHHLQMHVIAEGVETKEELAFLQEHLCEEVQGYLFSRPLPSEDVAFYLQAQK 802 >UniRef50_A1SZV0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SZV0_PSYIN Length = 711 Score = 474 bits (1221), Expect = e-132, Method: Composition-based stats. Identities = 77/449 (17%), Positives = 142/449 (31%), Gaps = 61/449 (13%) Query: 10 HIRDDEPVKKIE------EMVSIANRRNMQSDVTG-ILLFNGSHFFQLLEGP-----EEQ 57 + + + + + V +A R Q G +L + +F ++ + ++ Sbjct: 264 QLAHFDSLTGLANRNAFRKRVELAMERAKQYGHLGAVLFLDLDNFKRINDTLGHSIGDQL 323 Query: 58 VKMIYRAICQDPRHYN-----------------------IVELLCDYAPARRFGKAGME- 93 ++ + R + R + LL + + A Sbjct: 324 LQEVARRLTDIVRGSDSICGTNFNHAIDDNLISRLGGDEFTVLLPEIGKIKDAEHAARRV 383 Query: 94 ---------LFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEI 144 L + + A+F + + F Sbjct: 384 LNSIGDIINLSGHDIVVTPSIGIAIFPHHGENVDSLLKNADAAMYYVKRAGKNDYELFVN 443 Query: 145 PAEDSWLFIADGSDKELDSCALSPTINDHFA--FHPIVDPLSRRIIAFEAIVQKNE---- 198 + EL+S N + + P +D + RII EA+++ N Sbjct: 444 SMN-----VVAKRRLELESFLRHAIDNKELSVNYQPQIDIPTGRIIGAEALLRWNSAELG 498 Query: 199 -DSPSAIAVGQRKDGEIYTADLKSKALAFTM---AHALELGDKMISINLLPMTLVNEPDA 254 SP + G I A L + I++N+ + Sbjct: 499 MVSPVEFIPIAEETGLISPIGEWVLREACRQVKEWRDDGLPEIQIAVNISVQQFAKQS-L 557 Query: 255 VSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGL 314 + + L + +E TE+ ++ + E + LK GI++AID FG G++ L Sbjct: 558 DKLVSKVLLETGLPVHCLELEITENMLMDDVEGAVETLHKLKDLGINLAIDDFGTGYSSL 617 Query: 315 LLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLE 374 L RF D++KI + IT V A+ QAII +L + V A GV + +L Sbjct: 618 SYLKRFPIDKLKIDRSFITYVTTEPSDAAVTQAIISMAHNLGLTVIAEGVEEASQLEFLR 677 Query: 375 SAGIEMFQGDLFAKAKLNGIPSIAWPEKK 403 E QG F++ + K Sbjct: 678 QHHCEEMQGYYFSRPLIASDMEALLRSHK 706 >UniRef50_A0LKD9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LKD9_SYNFM Length = 844 Score = 474 bits (1220), Expect = e-132, Method: Composition-based stats. Identities = 68/411 (16%), Positives = 135/411 (32%), Gaps = 36/411 (8%) Query: 21 EEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHYNIV 75 + + R IL + F + + + ++ + + + R + + Sbjct: 424 DRLTHALARAGRDRHEFAILFLDLDRFKVINDTLGHTVGDFLLQGVTKRLLGGTRESDTL 483 Query: 76 EL----------------LCDYAPARRFGKAGMELF---DLRLHERDDVLQAVFDKGTSK 116 ARR E F + + +V+ + Sbjct: 484 ARWGGDEFIILLESIRGAEDAAVAARRILDVLAEPFSVQGHEVFVSGSIGISVYPRDGED 543 Query: 117 FQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAF 176 Q + +R ++E L + +L + Sbjct: 544 VQALLRCADIAMYRAKDSGKNDYQFYESTMSTGGL-ERLKLEGDLRYALKRNEFV--LHY 600 Query: 177 HPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSK---ALAFTM 228 P V+ + I+ EA+++ + P + G I L Sbjct: 601 QPRVNINTGLIVGAEALIRWDLPDRGLLWPLDFIPLAEESGFIIPIGEWVLRTACLQCRK 660 Query: 229 AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEF 288 + +S+NL + + S + +K L P + +E TES ++ ++ Sbjct: 661 WQDAGVPHPRVSVNLSTHQFKKD-NLTSTVDRILKETGLSPGLLELEITESAMMENLEKA 719 Query: 289 AEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAI 348 ++ L G++VAID FG G++ L L RF +KI Q + ++ + AI +I Sbjct: 720 VATLQGLAELGVNVAIDDFGTGYSSLGYLKRFPIGALKIDQSFVRHIPSNIDDTAIAMSI 779 Query: 349 IKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAW 399 I +L ++V A GV T E+ L + + QG LF++ + Sbjct: 780 ISLGKTLNLKVVAEGVETQEQLTVLRNYQCDEAQGYLFSQPVDADRMTEFL 830 >UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P713_AZOSE Length = 1043 Score = 474 bits (1220), Expect = e-132, Method: Composition-based stats. Identities = 64/416 (15%), Positives = 137/416 (32%), Gaps = 41/416 (9%) Query: 20 IEEMVSIANRRNMQSDVT-GILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHYN 73 +++ A +S + ++ + HF + + + + I N Sbjct: 625 FADLLRQAIGNAQRSGESLSVMYIDIDHFQHINDTLGHRIGDRLLVEIAGRFRNALCAEN 684 Query: 74 IVELL------------------CDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKGTS 115 + L M + D + + A++ Sbjct: 685 TLARLGGDEFLILLPHAQVECAAHVAEKLIVAAADPMLIEDHEMLVTPSIGIAMYPADGE 744 Query: 116 KFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF- 174 F+ R +F + L++ + Sbjct: 745 DFETLLQRADTATNRAKSDGRNTYRFFAPEMQLRSAHTLR-----LETALRRALERNELV 799 Query: 175 -AFHPIVDPLS-RRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFT 227 + P +D + R+ EA+++ SP+ G I A Sbjct: 800 LHYQPQIDLVDFGRVAGVEALIRWQHPEFGLVSPAEFIPIAESTGLILPIGEWVMQTALL 859 Query: 228 MAHALELGDKM---ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISR 284 A +L + +NL + + + + + L + +E TES ++ Sbjct: 860 QLKAWQLAGLQLGQVGVNLSAHQF-RQQNLPATVARILAEAGLPASCLELELTESAMMDD 918 Query: 285 FDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAI 344 + +L G+ ++ID FG G++ L L RF+ D++KI Q + ++ + +AI Sbjct: 919 PVAAVAMMDALHRDGVRMSIDDFGTGYSSLNYLKRFRIDKLKIDQSFVRDLTQDPEGEAI 978 Query: 345 IQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWP 400 ++AI+ +L + A GV PE+ +L ++G + QG LF++ ++ Sbjct: 979 VEAIVSLARTLRFRTIAEGVEKPEQLAFLRASGCQEVQGYLFSRPLPPDELAVWLR 1034 >UniRef50_B0CAC5 Diguanylate cyclase/phosphodiesterase n=7 Tax=cellular organisms RepID=B0CAC5_ACAM1 Length = 901 Score = 473 bits (1219), Expect = e-132, Method: Composition-based stats. Identities = 78/423 (18%), Positives = 152/423 (35%), Gaps = 49/423 (11%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHY 72 ++ ++ A R N ++ + F + + +E +K + + R Sbjct: 466 DRLNIALASAQRNN---GSVAVMFMDLDRFKLINDTLGHSIGDELLKEVALRLQDCLRDG 522 Query: 73 NIVE---------LLCDYAPARRFGKAGMELFD----------LRLHERDDVLQAVFDKG 113 + V LL + D L + A++ + Sbjct: 523 DTVARWGGDEFTVLLPKIESVNDAINTAYRILDALKAAFVIRRHELFVTTSIGIAIYPED 582 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 + ++ + + +R+ + FI L++ D Sbjct: 583 GQEAEILLQNADVALYRSKEQGRGTCQLYNPTMNAKEQFI-------LENSLRHALDRDE 635 Query: 174 F--AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAF 226 F + P V+ + I+ EA+V+ SP+ + G I A Sbjct: 636 FILHYQPKVNICTGEIVGLEALVRWEHPEMGLVSPATFIPIAEETGLIVELGEWVLRTAC 695 Query: 227 TM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVIS 283 H L L ++INL +P+ V + I++ L P+Q+ +E TE+ + Sbjct: 696 QQAVLWHKLGLAPLSVAINLSARQFY-QPNLVEIVAQVIESTGLNPQQLELEITETIAVK 754 Query: 284 RFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQA 343 + + +L+A G+ +A+D FG G++ L L + + +KI Q I ++ + Sbjct: 755 NMEFAKSILCNLQALGVHIAMDDFGTGYSSLNYLKQLPFNTLKIDQSFIQDLKPASKDVE 814 Query: 344 IIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL----NGIPSIAW 399 II A+I L+++V A GV E+ L S E+ QG LF++ I W Sbjct: 815 IINAVIALGKGLDLKVVAEGVDNEEQLELLRSLNCEIVQGYLFSRPLSVDSTTDILQANW 874 Query: 400 PEK 402 ++ Sbjct: 875 LQR 877 >UniRef50_Q2SFK1 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFK1_HAHCH Length = 1092 Score = 473 bits (1218), Expect = e-132, Method: Composition-based stats. Identities = 76/415 (18%), Positives = 152/415 (36%), Gaps = 38/415 (9%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEG-----PEEQVKMIYRAICQDPRHY 72 +I++ ++ A RRN + +F+ +F + + ++ + + ++ R Sbjct: 528 DRIQQAIAYAARRNKGF---ALAVFDLDNFKYINDSMGHETGDQLLTEVAESLRSCLREG 584 Query: 73 N---------IVELLCDYAPARRFG----------KAGMELFDLRLHERDDVLQAVFDKG 113 + V L+ R G L D + + F + Sbjct: 585 DTLARLGGDEFVILMHKEECDRPLGLMLNRIQQLVSQPRRLKDKEILVTPSIGVCQFPED 644 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 + ++ + + +S + +++L + + Sbjct: 645 GEDASTLLKNADTAMYKAKERGRNRICSYTQEMNES-IQKRVQMEQDLRRGIENGEL--E 701 Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNEDS----PSAIAVGQRKDGEIYTADLKSKALAF--- 226 + P +DP + EA+V+ + P + G I D A Sbjct: 702 LYYQPQLDPHGGGAVGLEALVRWRKGDRMVPPLEFIPIAEETGLITEVDAWVLRAACLQL 761 Query: 227 TMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFD 286 M + +S+NL P + V + ++ + + P + +E TES V+ + Sbjct: 762 KMWRDQKQQMVPVSVNLSPRQF-QDAYCVELVRKVLQESNIEPGCLKIEVTESMVMHNAE 820 Query: 287 EFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQ 346 E + LKA G+ +++D FG G++ L L F D++KI + + NV AII+ Sbjct: 821 EALRTMTQLKAMGVQLSMDDFGTGYSSLSYLKMFPFDQLKIDKSFVRNVTNDPQEAAIIR 880 Query: 347 AIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPE 401 AII +L I++ A GV T E++ +L AG ++ QG ++ E Sbjct: 881 AIIGLGKTLGIKIVAEGVETVEQYSFLVRAGCDLIQGYFYSPPLPVAACMHFLQE 935 >UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1T5E1_9BURK Length = 1055 Score = 472 bits (1217), Expect = e-132, Method: Composition-based stats. Identities = 75/405 (18%), Positives = 146/405 (36%), Gaps = 39/405 (9%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHY 72 ++E + +A R + V + F + + + + ++ + + R Sbjct: 638 DRLEHALVVAQRHHTGVAVV---FLDLDGFKNVNDSLGHSVGDRLLGVVAERLARCSRTS 694 Query: 73 NIVE---------LLCDYAPARRFGKAGME----------LFDLRLHERDDVLQAVFDKG 113 + V ++ D + L L+ + ++F + Sbjct: 695 DTVARHGGDEFVIVMTDTVDEQSLITWMERVRASIAEPVWLDGTELYVGCSMGASLFPQD 754 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 + + +R + +++ S + + Sbjct: 755 GDDAETLMKKADVAMYRAKDMGRNTFQFYQPEMNASAGARLNLERR---LRRALRDNEFL 811 Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTM 228 + P VD +S +I+ EA+V+ ++ PS+ + G I A Sbjct: 812 LHYQPQVDIVSGQIVGIEALVRWHDPEAGLVPPSSFIPLAEESGLIGPLSEWVLREACRQ 871 Query: 229 ---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 L +S+NL + + ++ + L P + +E TES ++ Sbjct: 872 NKAWQDQGLPPARVSVNLSARVF-QQRNIAKLVMQVLAETGLEPRYLELELTESTIMRNA 930 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 +E + L A GI +AID FG G++ L L RF DR+KI + ++++ SG + I Sbjct: 931 EEAVLMLNELHALGIGLAIDDFGTGYSSLSYLKRFPVDRLKIDRSFVSDIGVSGDDETIT 990 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 AII SL++QV A GV T + +L+ + QG FAK Sbjct: 991 SAIIALAHSLKLQVIAEGVETSAQLDFLKERACDEMQGFYFAKPL 1035 >UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K234_DESAC Length = 766 Score = 472 bits (1216), Expect = e-132, Method: Composition-based stats. Identities = 71/413 (17%), Positives = 139/413 (33%), Gaps = 37/413 (8%) Query: 20 IEEMVSIANRRNMQSDV-TGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHYN 73 +++ + A ++ T + L + F + + + + + + + Sbjct: 348 LDDRIQQAIVHAERAQRNTAVFLLDLDRFKVINDSLGHSQGDAVLLAVAERLSACISPGD 407 Query: 74 IVELLCD------------YAPARRFGK-------AGMELFDLRLHERDDVLQAVFDKGT 114 + L A AR + L + L + +++ + Sbjct: 408 TLSRLGGDEFAIVMTHVNHPADARIMAQKILNAFEQPFPLGNRELRITTSIGASLYPRDG 467 Query: 115 SKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF 174 + + ++ + + A + +L + Sbjct: 468 EQSEDLLRHADAAMYQAKKQGGNGFQFCSEEMDTRA-HKALELEGDLRQALQLGSFV--L 524 Query: 175 AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTM- 228 + P V S +I EA+V+ N SP + G I A Sbjct: 525 HYQPKVKIASGKIDGCEALVRWNHPDKGMISPDDFIPLAEETGLIIALGEWVLREACRQF 584 Query: 229 --AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFD 286 A L I++NL + + D V + + + P + +E TES V+ D Sbjct: 585 KAWQAQGLPPIKIAVNLSARQFL-QSDFVESIQTILHEFDIDPHWLDLELTESMVMEDPD 643 Query: 287 EFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQ 346 A+ + LK G ++++D FG G++ L L RF D +KI + I +V ++ Sbjct: 644 RIAKLLAELKQIGFALSLDDFGTGYSSLNYLRRFPIDCLKIDRSFILDVASDATAASVAN 703 Query: 347 AIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAW 399 ++I SL I A GV T E++ +L + QG LF+K + Sbjct: 704 SVIGIAHSLGIHAIAEGVETREQYAFLAMCECDSIQGYLFSKPLPANDLAALL 756 >UniRef50_Q1JZB1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZB1_DESAC Length = 1092 Score = 472 bits (1216), Expect = e-132, Method: Composition-based stats. Identities = 61/417 (14%), Positives = 136/417 (32%), Gaps = 37/417 (8%) Query: 19 KIEEMVSIANRRNMQSDV-TGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHY 72 + E++ A +L + F + + ++ ++ + R Sbjct: 666 RFTEVLEAAVGDAEGHGRYLSLLFIDLDRFKNINDSLGHSIGDKLLQAVARRTGSLIDSA 725 Query: 73 NIVELL-------------------CDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKG 113 +++ L ++ D LH + V Sbjct: 726 DVLARLGGDEFAILLFNCVTPVVGADTAQRVIDALSQPFQIDDYSLHVSASIGITVAPVD 785 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 + + F+ ++E + +L + Sbjct: 786 AREPDELIKCADIAMFKAKDAGRNTYKFYERSMNLKT-HELLLLENDLRHALSRDQL--E 842 Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTM 228 + P +D S I+ FEA+++ N SP + G I + A Sbjct: 843 LYYQPQLDLQSNCIVGFEALLRWNHPERGLVSPLEFIPLAEETGLIVSMGEWILRSACRQ 902 Query: 229 ---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 + +++N+ + D V + ++ + E + +E TES ++ Sbjct: 903 IRTWNEEHGRQLRVAVNISARQF-HHYDLVHCVEKVLEQTGVPTEWLELEITESLLMYDI 961 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 E + LK G+ +AID FG G++ L L +F +KI + + ++ AI Sbjct: 962 QSSIETMMRLKKLGVRLAIDDFGTGYSSLSYLKKFPICSLKIDKSFVDDLLTDASDAAIA 1021 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEK 402 ++ + + +++ V A G+ E+ +L+ G + QG L ++ + E+ Sbjct: 1022 ESTLALASKMDLMVVAEGIEQQEQLDYLQQRGCQFGQGYLISRPLPVAQCTQFCRER 1078 >UniRef50_Q1H2G8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H2G8_METFK Length = 633 Score = 472 bits (1216), Expect = e-131, Method: Composition-based stats. Identities = 70/436 (16%), Positives = 145/436 (33%), Gaps = 44/436 (10%) Query: 1 MLTTLIYRSHIRDDEPVKKIEEMVSIANRRNM-------QSDVTGILLFNGSHFFQLLEG 53 ML + + + V + + + ++ + V +L+F+ F + + Sbjct: 186 MLKAEERAGFLANYDTVTDLPNRHAFSRHFHLLLEGARHRRGVLALLVFDLDDFKVINDT 245 Query: 54 P-----EEQVKMIYRAICQDPRHYNIVELLC-----------------DYAPAR--RFGK 89 ++ + ++ + + N V + + R R Sbjct: 246 LGHDVGDKLLHLVAQRLMVAAGKKNTVYRVGGDEFAMMLDQPADVENVEAVANRFIRALA 305 Query: 90 AGMELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDS 149 + L D + + +++ D + F Sbjct: 306 PPIVLNDRNFYIGVSIGASIYPYDGEDAAHLLRDADAAMYYAKSRGKNNFQMFSAEMHHK 365 Query: 150 WLFIADGSDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAI 204 + EL + P +++ EA+++ + PS+ Sbjct: 366 S-STRLLLETELRVALE--EKQFELYYQPQFSLPDCKLVGVEALIRWHHPQRGLLCPSSF 422 Query: 205 AVGQRKDGEIYTADLKSKALAFTM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNE 261 + G I A AL + +S+NL + + V + Sbjct: 423 IPVAEETGLIVRIGEWVLREACRQAMEWKALGVP-LRMSVNLSGRQF-RQENLVQTMTKI 480 Query: 262 IKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQ 321 I+ + + +E TE+ ++ + + LKA G+ +AID FG G++ + L RF Sbjct: 481 IERTGMDSSLLELEITETVLMEDAEATTTRLADLKAMGMHLAIDDFGTGYSSMAYLKRFP 540 Query: 322 PDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMF 381 R+KI + I ++ AI A I+ SL+++V A GV T + +L G +M Sbjct: 541 VSRLKIDRSFIRDIPNDPDDVAITTATIQMAHSLKLEVVAEGVETKAQLQFLREQGSDMV 600 Query: 382 QGDLFAKAKLNGIPSI 397 QG LF++ + Sbjct: 601 QGYLFSRPVSAREMAE 616 >UniRef50_C5CTK8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Variovorax paradoxus S110 RepID=C5CTK8_VARPS Length = 1107 Score = 472 bits (1216), Expect = e-131, Method: Composition-based stats. Identities = 73/425 (17%), Positives = 155/425 (36%), Gaps = 44/425 (10%) Query: 2 LTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EE 56 LT L R+ ++ ++ + +NR Q V + + F + + +E Sbjct: 676 LTGLFNRAALQH-----ELARAIKRSNRHQKQFAV---IFVDLDRFKHINDTLGHGVGDE 727 Query: 57 QVKMIYRAICQDPRHYNIVE---------LLCDYAPARRFG----------KAGMELFDL 97 +K+ + R ++V LL + + A L Sbjct: 728 MIKICGERLTALLREADVVARFGGDEFVLLLENLSSANDAAGLAEKVLACCAEPFFLAGR 787 Query: 98 RLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGS 157 LH V +++ + + + +R ++ ++ Sbjct: 788 ELHVSASVGVSIYPDNGADAEALLKNADTAMYRAKERGRNTFRFYAAKM-NAQNTEQLML 846 Query: 158 DKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDG 212 + L + + P +D ++RI+ EA+++ + P + G Sbjct: 847 ESALRHALERGEL--EMHYQPKMDLQTQRIVGVEALMRWHHPILGMIPPVQFIPIAEELG 904 Query: 213 EIYTADLKSKALAF---TMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVP 269 I + + A L ++S+NL P + ++ + ++A+ L P Sbjct: 905 LIVSLGKWALERACADSRSWQKYGLPKVLMSVNLSPRQFESRT-LIADIQAVLEASGLEP 963 Query: 270 EQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQ 329 + +E TE V++ + A+ +++++ G+ +AID FG G++ L L F +KI + Sbjct: 964 SLLELEITEGAVMANPEHAAKLLRAIRDMGVGLAIDDFGTGYSSLSYLKHFPLSTVKIDR 1023 Query: 330 ELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 I ++ + +A+I II L ++V A G+ T + +L S G + QG K Sbjct: 1024 SFINDLSQDADARALIDGIITLAHGLRMKVVAEGIETTAQLDYLRSHGCDEAQGYWLCKP 1083 Query: 390 KLNGI 394 Sbjct: 1084 VPADE 1088 >UniRef50_A4G3M6 Putative two-component response regulator n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G3M6_HERAR Length = 818 Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats. Identities = 73/407 (17%), Positives = 137/407 (33%), Gaps = 43/407 (10%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEG-----PEEQVKMIYRAICQDPRHY 72 ++ ++ + A R + ++ + +F + + +E + + + R Sbjct: 405 ERTQQALLQARRHD---HFLSLVFIDLDNFKLVNDSMGHGAGDELIANVGSRLQTCVRDG 461 Query: 73 NIVELLCDYAPARRFGKA-------------------GMELFDLRLHERDDVLQAVFDKG 113 + V + M + + + A F + Sbjct: 462 DTVARIGGDEFVLLLTNQSVSDSNAGVMQRIQAELIKPMWIRGQEIVVTCSMGVARFPED 521 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 + + +R ++ + G L+S ND Sbjct: 522 GEDSESLLANADTAMYRAKSSGRNNFQFYTKEMNATS-----GERLSLESDLWHALKNDE 576 Query: 174 F--AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAF 226 + P +D +I EA+++ +P +G I + A Sbjct: 577 LFLVYQPQIDLRDGTVIGMEALIRWQHPKRGLIAPMDFIPMAECNGLIIPIGIWVLETAC 636 Query: 227 T---MAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVIS 283 L ++INL L ++ + V + + I+A L P + +E TES V+ Sbjct: 637 RHNLQLQKEGLPPIRVAINLSARQL-SDRNFVESVQSVIEAIGLDPHYLELEVTESMVMH 695 Query: 284 RFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQA 343 ++ + L GI +++D FG GF+ L L RF DR+KI Q I N Sbjct: 696 NVEDVVVTLNDLNKMGIQLSLDDFGTGFSSLAYLKRFPIDRLKIDQSFIFNCDSDPGDAI 755 Query: 344 IIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 I Q II L+I+V A GV E +L+ G + QG ++ Sbjct: 756 IAQTIIALAHGLKIKVIAEGVEKSEHLSFLKKNGCDEGQGYFISRPL 802 >UniRef50_A1ASK8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=A1ASK8_PELPD Length = 858 Score = 471 bits (1213), Expect = e-131, Method: Composition-based stats. Identities = 61/416 (14%), Positives = 133/416 (31%), Gaps = 39/416 (9%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHY 72 ++E+ + A R + +LL + F + + + + + + + + R Sbjct: 290 DRLEQSLHYAKR---SGRIVAVLLLDLDRFKIINDSLGHSFGDRLLSAVAQRLDRVVRDT 346 Query: 73 NIVELLCD-----------------YAPARRF--GKAGMELFDLRLHERDDVLQAVFDKG 113 + V L +R + + + +++ K Sbjct: 347 DTVARLGGDEFVLLLAEVTEPDDVGLLASRILHELAVPHRIEGREIVMSASLGISLYPKD 406 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 + + + +R +++ + + L Sbjct: 407 SGDGSTLIRNADIAMYRAKQEGGGVFSFYAPEMNQRAMET-MEIESALRLALERGEFT-- 463 Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTM 228 + P VD S RI EA+++ +P+ + G I A Sbjct: 464 LYYQPKVDLASGRISGCEALIRWLHPRRGVVAPADFIPLAEETGLIVPIGTWVLKEACRQ 523 Query: 229 ---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 A + +++NL D + + L P + +E TES V++ Sbjct: 524 VRAWQAEGVPIANVAVNLSARQF-RTGDLPGLVREVLGETGLDPHLLELEMTESMVMADH 582 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 + ++ L A G+ +++D FG G++ LS F + +KI + I + I Sbjct: 583 AQVVAVMEELTAIGVRLSLDDFGTGYSSFAHLSHFPINHLKIDRSFIKQIVTDPNSATIA 642 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPE 401 +II + ++ A GV T + +L G + QG L ++ + Sbjct: 643 TSIIAMAHRMRLKAIAEGVETEAQLAYLRKQGCDEIQGYLLSRPLPASEYAALVRR 698 >UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZ89_CHRVO Length = 936 Score = 471 bits (1213), Expect = e-131, Method: Composition-based stats. Identities = 85/431 (19%), Positives = 161/431 (37%), Gaps = 44/431 (10%) Query: 1 MLTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----E 55 +LT+L R H++D ++E + A R N + + L + F + E + Sbjct: 509 VLTSLPNRIHMQD-----RVELAIHNAVRDNQRLALL---LLDLDRFKTVNESLGHSAGD 560 Query: 56 EQVKMIYRAICQDPRHYNIVE------------LLCDYAPA-------RRFGKAGMELFD 96 +++ I ++ ++ D A R +EL + Sbjct: 561 TLLQVAADRIKSVMAPGEMLARQGGDEFIILLPVISDPGEAALAAERVRDVFANPIELHN 620 Query: 97 LRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADG 156 L + +V+ ++ + + ++ I Sbjct: 621 HVLTITPSIGISVYPDDGRDYETLVRNADAAMYHAKSSGRNSYKFYTADLNARAREIL-A 679 Query: 157 SDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKD 211 + +L + P V+ S RI+ EA+++ N S P + Sbjct: 680 IESQLRFALERDEFV--LHYQPQVEMESGRIVGAEALIRWNHPSLGLLGPVRFIQVAEER 737 Query: 212 GEIYTADLKSKALAFTM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALV 268 G I A A L + ++INL + +PD + ++++ L Sbjct: 738 GFIVQIGNWVIAEATRQLVEWRRAGLPELTLAINLSALQF-RQPDLALQVKQALESSGLP 796 Query: 269 PEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKIS 328 + +E TES ++ + I ++K G+ ++ID FG G++ L L RF+ D++KI Sbjct: 797 GHALDIEVTESIIMEDAQATIQTIDNMKNMGLRLSIDDFGTGYSSLSYLKRFKADKLKID 856 Query: 329 QELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 + + ++ + AI +AII +L +QV A GV T E+W +LE G + QG L AK Sbjct: 857 RSFVRDIPQDADDSAIARAIINMAKNLNMQVVAEGVETMEQWQFLEQEGCDFVQGYLIAK 916 Query: 389 AKLNGIPSIAW 399 + Sbjct: 917 PLPADDFAELL 927 >UniRef50_Q47HF3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q47HF3_DECAR Length = 994 Score = 471 bits (1213), Expect = e-131, Method: Composition-based stats. Identities = 77/417 (18%), Positives = 144/417 (34%), Gaps = 43/417 (10%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHY 72 ++ + + A R T ++L + + F + + +E + + R + R Sbjct: 437 DRLNQALLTARRFERG---TALILLDLNRFRLINDTLGPPAGDEILVEVTRRLKLQVREG 493 Query: 73 NIVE---------LLCDYAPARRFGKAGMELFD----------LRLHERDDVLQAVFDKG 113 + V ++ + + R + D + + +VF K Sbjct: 494 DTVGRRAGNEFGFVMANLSHERDALALAQRMLDAISVPFSVAGQSVAITASIGISVFPKN 553 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 + R +++ + ++S D Sbjct: 554 GENGEAMLRSADAALLRAKQSGRNTFSFYSPEMDADA-----ARRLSIESALRDALARDE 608 Query: 174 F--AFHPIVDPLSRRIIAFEAIVQKNE-----DSPSAIAVGQRKDGEIYTADLKSKALAF 226 F + P V S +I EA+++ N SP + G I A Sbjct: 609 FCVHYQPQVSLDSGHMIGMEALLRWNSALLGPISPVEFIPIAEETGLIMQIGDWVLRTAC 668 Query: 227 TM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVIS 283 L L +++NL P + D + + + + + L + +E TES I Sbjct: 669 HQTKAWLDLGLLPLHVAVNLSPRQF-RQADLPAQVAHALAESGLPAGALELEITESAFID 727 Query: 284 RFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQA 343 D+ LK+ GI +++D FG G++ L +SRF D+IKI Q + ++ + A Sbjct: 728 DIDDAVAMCSKLKSLGIKLSLDDFGTGYSSLAYVSRFPFDKIKIDQSFVRDIVNNPVNAA 787 Query: 344 IIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWP 400 I A I SL + V A GV T + +L S + QG LF++ + Sbjct: 788 IASAAIVMGRSLNLSVLAEGVETEAQAAFLRSRRCDAIQGYLFSRPLPPEEFAPLLL 844 >UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7P0M4_CHRVO Length = 633 Score = 470 bits (1212), Expect = e-131, Method: Composition-based stats. Identities = 71/433 (16%), Positives = 156/433 (36%), Gaps = 43/433 (9%) Query: 10 HIRDDEPVKKIE------EMVSIANRR-NMQSDVTGILLFNGSHFFQLLEGP-----EEQ 57 H+ + + + + + + A R+ +Q + +L + HF + + +E Sbjct: 198 HMAEYDALTDLPNRVLVNDRLHQAIRQAELQHNQLAVLFVDLDHFKNINDTLGHCAGDEL 257 Query: 58 VKMIYRAICQDPRHYNIV-------------------ELLCDYAPARRFGKAGMELFDLR 98 +K + R + R + V E R + ++ + Sbjct: 258 LKEVARRLAGAVRGLDTVGRTGGDEFVLILPSINQPGEAAQIAERILRTIQQPFQIGEHS 317 Query: 99 LHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSD 158 L + ++ S Q + L + ++ ++ + + Sbjct: 318 LVVGCSIGISLMPDDGSDIQTLLMNADLAMYHAKAHGRNTFRFYTREM-NTQVAERLLME 376 Query: 159 KELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGE 213 L + + + P D +R++ EA+++ + P G Sbjct: 377 NRLRRAMEQEQL--YLVYQPQYDMAGQRLLGCEALLRWRDPDEGLIMPGRFIPVAEDTGL 434 Query: 214 IYTADLKSKALAFTM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPE 270 I A L +++N+ L+ D + + ++ +AL Sbjct: 435 IVPLGRWVLDQACRQASLWLRAGLEPMRVAVNVSAHQLMRH-DFIDDVREALQRHALPGH 493 Query: 271 QIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQE 330 + +E TES +++ D + + +KA G+ +AID FG G++ L L RF PD +KI + Sbjct: 494 CLELEVTESTLMADADLASRQLAVIKAMGVRLAIDDFGTGYSSLAYLKRFAPDLVKIDRS 553 Query: 331 LITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 I+++ AI+ AI+ +L ++ A GV + +L++ G E QG L Sbjct: 554 FISDLPGDEENAAIVSAIVHLAGALGMETLAEGVENENQQRFLQTLGCEAMQGYLLGSPL 613 Query: 391 LNGIPSIAWPEKK 403 + + +++ Sbjct: 614 AEEMMTRRLEQQQ 626 >UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase sensor n=1 Tax=Thauera sp. MZ1T RepID=C4KA21_THASP Length = 1093 Score = 470 bits (1212), Expect = e-131, Method: Composition-based stats. Identities = 76/433 (17%), Positives = 145/433 (33%), Gaps = 44/433 (10%) Query: 2 LTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EE 56 LT L+ RS +D ++++ A R + D +L + F + + + Sbjct: 668 LTGLLNRSAWQDH-----AQDVLRHAARHD---DRCAVLFLDLDDFKTVNDSLGHAAGDR 719 Query: 57 QVKMIYRAICQDPRHYNIVE---------LLCDYAPARRFGKAGMELFD----------L 97 + + + R ++V LL A A + + D Sbjct: 720 LLAQVACRLGGCVRAEDLVARIGGDEFVILLSRLAHAEEPARVAERVLDALARPLQIDSQ 779 Query: 98 RLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGS 157 L + A++ + + +F + + Sbjct: 780 PLRVGASIGIALYPADGGEIDTLLKHADTAMYEAKESGRNAYRFFLPEMTQR-VTRRLQT 838 Query: 158 DKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDG 212 + EL S + + P +D S R+ EA+V+ P + G Sbjct: 839 EAELRKAIESGDLR--LHYQPQIDAASGRVYGCEALVRWQHPERGLLPPDRFVPFAEQSG 896 Query: 213 EIYTADLKSKALAFTM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVP 269 I A L +++N+ + D V+ + + P Sbjct: 897 LIVPLGEWVLREACLQQVRWRDAGLPPLDVAVNISALQFRRR-DFVATVARVLGETGADP 955 Query: 270 EQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQ 329 +I +E TES ++ E + L A G+++A+D FG G++ L L R R+KI + Sbjct: 956 ARIELEITESALMDATPELVASFDQLVALGLTLALDDFGTGYSSLSYLKRLPLRRLKIDR 1015 Query: 330 ELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 + + + AI A + L ++V A GV T ++ +L G QG LF++ Sbjct: 1016 SFVDGLPDNPEDAAITSATLSLARDLGMEVVAEGVETEDQRGYLCKRGCRAMQGYLFSRP 1075 Query: 390 KLNGIPSIAWPEK 402 + E+ Sbjct: 1076 LGVEEFGTWFEEQ 1088 >UniRef50_Q3A4W5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A4W5_PELCD Length = 1274 Score = 470 bits (1211), Expect = e-131, Method: Composition-based stats. Identities = 68/418 (16%), Positives = 142/418 (33%), Gaps = 39/418 (9%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHY 72 +E + + R + ++L + F + + ++ +K + + + Q R Sbjct: 828 DHLEIALHQSQRSKK---LVAVILLDLDRFKVINDSLGHLVGDQVLKAVGQRLKQYVRST 884 Query: 73 NIVELL------------CDYAPARRFG-------KAGMELFDLRLHERDDVLQAVFDKG 113 + V L D A + L L+ + + Sbjct: 885 DTVARLGGDEFVVLLTDVRDTTAAGKIAHNLLRKLNEPFFLHGRELYVSASFGICLSETD 944 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 + + + ++ ++ + L + L Sbjct: 945 NVDGTILLRNADIAMYKAKAEGCGLY-FYSHEMNEH-LIKTLEMENSLRQALEKNE--FQ 1000 Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTM 228 + P V+ + RII EA+++ PS + G I A A Sbjct: 1001 LYYQPKVEHATGRIIGCEALLRWRHPQRGMIPPSEFIPLAEETGLIVQIGHWVLAEACRQ 1060 Query: 229 ---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 L +++N+ + + + + ++ + LVP Q+ +E TES V+ Sbjct: 1061 SKIWETEGLPPLTMAVNISARQFYQGENLIQAVKSTLERSQLVPSQLELELTESMVMKDA 1120 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 ++ +K G+S+++D FG G++ L L F D +KI + I ++ AI+ Sbjct: 1121 VNAERTMRKIKQLGVSLSLDDFGTGYSSLNYLRSFPVDSLKIDRSFILDIASDASSAAIL 1180 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEKK 403 +II +L +Q A GV ++ + + G QG LF++ + K Sbjct: 1181 NSIIAIAHTLGLQTVAEGVENNDQLALVANCGCNYIQGYLFSRPLPPEDFVALFLANK 1238 >UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=12 Tax=Bacteria RepID=A0L2H7_SHESA Length = 1228 Score = 470 bits (1211), Expect = e-131, Method: Composition-based stats. Identities = 63/376 (16%), Positives = 130/376 (34%), Gaps = 19/376 (5%) Query: 30 RNMQSDVTGILLFNGSHFFQLLEGPEEQVKMI----YRAICQDPRHYNIVELLCDYAPAR 85 + V +LL + + + G ++ V + + + D H + ++ R Sbjct: 850 DTLGHHVGDMLLLEVARRLKNIMGNDDIVARLGGDEFVVVLSDTDHDRVAKVAE---ALR 906 Query: 86 RFGKAGMELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIP 145 + + LH + ++F + + + +R +F Sbjct: 907 SGLNQTYLIDNKPLHSSPSIGISLFPTDGDSVEALMKNADMAMYRAKAAGRNNYQFFTAA 966 Query: 146 AEDSWLFIADGSDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS----- 200 ++ + + L + P VD S +++ EA+++ Sbjct: 967 M-NTLVTERQQIETGLRQAI--ACNELLLYYQPQVDISSGQVVGVEALIRWQHPELGLVA 1023 Query: 201 PSAIAVGQRKDGEIYTADLKSKALAFTM---AHALELGDKMISINLLPMTLVNEPDAVSF 257 P + I A +++NL L + V+ Sbjct: 1024 PDRFIPIAEEIDMIIPIGQWVLENALAQLAEWRDKGAKGLRMAVNLSAHQLRKDT-IVAD 1082 Query: 258 LLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLL 317 ++N + + L + +E TES + ++ A+ + L+ GI +AID FG G++ L L Sbjct: 1083 IINVLTKHKLGKGALELEITESVAMQYPEQNAKLLAELRQHGIELAIDDFGTGYSSLSYL 1142 Query: 318 SRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAG 377 DR+K+ + + ++ AI A I L + V A GV + + L G Sbjct: 1143 KLLPLDRLKLDRSFVKDIESDPNDAAISAATISMAHELGLTVVAEGVENEAQLVLLSGMG 1202 Query: 378 IEMFQGDLFAKAKLNG 393 ++ QG F+K Sbjct: 1203 CDLVQGYYFSKPLAAD 1218 >UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Acidovorax RepID=A1TLA6_ACIAC Length = 1120 Score = 470 bits (1211), Expect = e-131, Method: Composition-based stats. Identities = 75/402 (18%), Positives = 141/402 (35%), Gaps = 32/402 (7%) Query: 11 IRDDEPVKKIEEMVSIANRRNMQSDVTG--ILLFNGSHFFQLLEGPEEQVKMIYRAICQD 68 + D + ++ +R + T + F G F +LEG + Sbjct: 719 LNDTLGHDMGDRLLVQVAQRLQECVRTSDTVARFGGDEFVVMLEGLD------------- 765 Query: 69 PRHYNIVELLCDYAPARRFG--KAGMELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRAL 126 + L + + E+ + + + +F L Sbjct: 766 -ADTALAALQAEQVAEKLLAQLNRPFEMGAQQHYSTPSIGITLFGDQRRTVDELLKRADL 824 Query: 127 QFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPIVDPLSRR 186 ++ +F+ + + + + +L + H PIVD + R Sbjct: 825 AMYQAKAAGRNTQRFFDPDMQ-AQVTARSQLESDLRQGIARHELTVHL--QPIVDGST-R 880 Query: 187 IIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTMAHALELGD----K 237 + EA+V+ SP+ + G I + A Sbjct: 881 LCGAEALVRWRHPVKGLISPADFIPLAEETGLILPLGRQVLQTACEQLVRWATHPATASF 940 Query: 238 MISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKA 297 I++N+ +PD V+ +L + P+++ +E TES ++ ++ + LK Sbjct: 941 TIAVNVSARQF-RQPDFVAEVLGTLAGTGANPQRLKLELTESLLLGDVEDTICRMAQLKR 999 Query: 298 AGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEI 357 G+ A+D FG G++ L L R D +KI Q + +V AI++ I+ SL++ Sbjct: 1000 VGVGFALDDFGTGYSSLSYLKRLPLDLVKIDQSFVRDVLTDPNDAAIVRTILALAKSLDL 1059 Query: 358 QVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAW 399 QV A GV T + +L+ G E FQG LF + Sbjct: 1060 QVVAEGVETAGQLSFLKLHGCEGFQGYLFGRPVPLEAFEREH 1101 >UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVK9_METML Length = 1329 Score = 470 bits (1210), Expect = e-131, Method: Composition-based stats. Identities = 66/410 (16%), Positives = 136/410 (33%), Gaps = 36/410 (8%) Query: 24 VSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHYNIV--- 75 +++A + +++ VT ++ + F + E ++ VK + R + V Sbjct: 925 LALATAKRLKTAVT-LMFVDLDRFKFINESLGPSIGDQVVKELAERFVAYMRPEDTVCRQ 983 Query: 76 ---------------ELLCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKGTSKFQLT 120 ++ + + + + F+ Sbjct: 984 GGDEFILLLPNTDAEGAAHVAKKLLDIVAQPFNFHGQKIVLTASIGISAYPQDGESFEQL 1043 Query: 121 YDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPIV 180 +R +F + + EL S + P Sbjct: 1044 AQSADAALYRAKYEGRNNFQFFARQMHEQA-HDILLLESELRSAIEHEEFL--LYYQPQY 1100 Query: 181 DPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTM---AHAL 232 D + +II EA+++ SP+ + G I A Sbjct: 1101 DSKTSKIIGLEALIRWQHPEKGLVSPAVFIPIAEESGLIAEIGDWVLRTAVKQLASWQEA 1160 Query: 233 ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAI 292 LG +++NL + ++ + ++ + P + +E TE + + + Sbjct: 1161 GLGAVPVAVNLSVVQF-HQDTLYGSVCQILRDTKVDPSMLELELTEGIAMEDSERTLNVL 1219 Query: 293 KSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCC 352 L + G+ ++ID FG G++ L L +F+ D++KI Q + + AII AII Sbjct: 1220 NQLNSLGVRLSIDDFGTGYSSLSYLKKFKIDKLKIDQSFVRGIGSHPQDAAIITAIISMA 1279 Query: 353 TSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEK 402 SL + A GV T E+ +L + + QG F+K + + + Sbjct: 1280 KSLSFKTIAEGVETLEQLNFLIANSCDEIQGYYFSKPLPSTEVTKLLANQ 1329 >UniRef50_B8H3B9 Sensory box/GGDEF family protein n=5 Tax=Caulobacteraceae RepID=B8H3B9_CAUCN Length = 748 Score = 470 bits (1210), Expect = e-131, Method: Composition-based stats. Identities = 74/427 (17%), Positives = 144/427 (33%), Gaps = 41/427 (9%) Query: 9 SHIRDDEPVKKIEEMV-------SIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EE 56 + + +P+ + V RR+ + D + + F + + + Sbjct: 276 ARLAHYDPLTDLPNRVLFQKSLGEALARRSRKGDALAVHFVDLDRFKTVNDTLGHPLGDA 335 Query: 57 QVKMIYRAICQDPRHYNIVELL------------CDYAPARRFG----KAGMELFDLRLH 100 +K+ + R + V L D A R +A FDL+ H Sbjct: 336 LLKIAAERLRGCVREGDTVARLGGDEFAIVQTGLDDSNGATRLAARIVEAMAAPFDLQGH 395 Query: 101 ---ERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGS 157 V ++ + +R +FE D L Sbjct: 396 HVVIGASVGVSLAPTDGDDADELLKKADMALYRAKADGRGAYHFFERAM-DEQLQARRAL 454 Query: 158 DKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDG 212 + +L + + P+ R+ EA+++ SP+ + G Sbjct: 455 ELDLRRALQAGE--FELFYQPLYHLGDERVTGCEALLRWRHPERGMVSPADFIPLAEEIG 512 Query: 213 EIYTADLKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQI 272 I A A +++NL P + V +++ + A+ L +++ Sbjct: 513 LIVQLGEWVLRRACAEAANWP-EHVRLAVNLSPAQF-RDRGLVRTVVSALAASGLPAQRL 570 Query: 273 IVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELI 332 +E TES ++ + LKA G+ +++D FG G++ L L F D+IKI Q + Sbjct: 571 ELEITESVLLQDSQANMTMLHDLKALGVRISMDDFGTGYSSLSYLRSFPFDKIKIDQTFV 630 Query: 333 TNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLN 392 ++ AII+A++ S+ + +A GV T + L G QG ++ Sbjct: 631 RDILHDSDAMAIIKAVLDLGASMGVVTTAEGVETQAQLDALRQQGCAEIQGYFISRPAPA 690 Query: 393 GIPSIAW 399 + Sbjct: 691 SEIAKML 697 >UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H367_METFK Length = 1070 Score = 470 bits (1210), Expect = e-131, Method: Composition-based stats. Identities = 69/417 (16%), Positives = 142/417 (34%), Gaps = 43/417 (10%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHY 72 +++E V A R G+L + F + + + ++ + + + R Sbjct: 636 ERMELAVLRAQRYQQ---CVGVLFIDLDRFKIINDTLGHQAGDVLLQEVAGRLGECLRQT 692 Query: 73 N---------IVELLCDYAPARRFGK----------AGMELFDLRLHERDDVLQAVFDKG 113 + V L+ D+ + L L+ + +V+ Sbjct: 693 DTIARQGGDEFVVLVEDFIEQQYLVNVARKIMHALAQPFILMQQELYISASIGISVYPDD 752 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 + + +R ++ + + S L++ + Sbjct: 753 GVDISSLLKNADMAMYRAKDDGKNTFHFYSADGNANSV-----SRLTLENSLRRALERNE 807 Query: 174 F--AFHPIVDPLSRRIIAFEAIVQKNE-----DSPSAIAVGQRKDGEIYTADLKSKALAF 226 F + +D + II EA+++ + SP + G I A Sbjct: 808 FSLLYQAKLDLAEQNIIGAEALIRWHSAELGMVSPQDFIPVAEETGMIIEIGEWVLQQAC 867 Query: 227 TM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVIS 283 + + +N+ E + N ++ + L P + +E TES ++ Sbjct: 868 RDACHWQEVAGRPIRVGVNISARQF-REDSLYQAISNALEESGLTPNCLELEITESMIMQ 926 Query: 284 RFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQA 343 + ++ ++ + G V ID FG G++ L L F D +KI + + ++ + A Sbjct: 927 NAERASQMLQHFRNLGSYVLIDDFGTGYSSLGYLKHFPIDSLKIDRSFVRDIPQDSDDMA 986 Query: 344 IIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWP 400 I QAII SL+I V A GV T + +L G + QG +F++ + Sbjct: 987 ITQAIIAMAHSLKINVVAEGVETQAQLEFLRGQGCDQLQGYIFSRPLVVEDFVGLLR 1043 >UniRef50_D2XIQ4 Putative signal transduction protein n=1 Tax=uncultured bacterium 9F08 RepID=D2XIQ4_9BACT Length = 965 Score = 470 bits (1210), Expect = e-131, Method: Composition-based stats. Identities = 70/414 (16%), Positives = 144/414 (34%), Gaps = 39/414 (9%) Query: 19 KIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHYN 73 ++++ + A+R V L + HF + +G + + I + + R + Sbjct: 420 RLQQTTAQAHRHGKSVAV---LFLDLDHFKIVNDGLGHDCGDRLLVAIAQRLQTVVREAD 476 Query: 74 IVE---------LLCDYAPARRFGKAGMEL----------FDLRLHERDDVLQAVFDKGT 114 V +L + + G L + L+ V ++F + Sbjct: 477 TVARHGGDEFVIVLSEPDNGEDAAEIGRRLLQRIAEPVWIDEHELYTTASVGVSLFPRDG 536 Query: 115 SKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF 174 + + +R L ++ + L +L + Sbjct: 537 TDVDTLLRNADAAMYRAKHLGRNNLQFYSEEM-NLSLSKRLRMLSQLRQAVERNELC--L 593 Query: 175 AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTM- 228 + P R++ EA+V+ SP+ + G I A Sbjct: 594 HYQPQASLPGGRLLGVEALVRWQHPELGMVSPAEFIPLAEESGLIEPIGEWVLREACRQG 653 Query: 229 --AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFD 286 IS+NL N P + + ++ L PE++ +E TE+ +I+ Sbjct: 654 VAWDRAGFMPLRISVNLSARQFDN-PKLDDTIRDVLEQTGLAPERLELELTETALIANPQ 712 Query: 287 EFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQ 346 + + + +++ G+ +A+D FG G++ L L R+ D IKI + + + ++ AI++ Sbjct: 713 QSVQRLSAIRDLGVRLALDDFGTGYSSLAYLQRYTFDLIKIDRSFVADAIRNPGNAAIVR 772 Query: 347 AIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWP 400 +I L + A G T E +L G + QG ++ G +P Sbjct: 773 TVIAMARLLGSETIAEGAETAETITFLGRNGCDAVQGYYISRPLPAGEIEQLFP 826 >UniRef50_B8HWB1 Diguanylate cyclase/phosphodiesterase with FHA and GAF sensor n=2 Tax=Cyanothece sp. PCC 7425 RepID=B8HWB1_CYAP4 Length = 884 Score = 469 bits (1209), Expect = e-131, Method: Composition-based stats. Identities = 67/417 (16%), Positives = 139/417 (33%), Gaps = 40/417 (9%) Query: 17 VKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRH 71 + ++ +S A+R + V L + F + + ++ +K + + R Sbjct: 463 IDRLNLALSNAHRSGEKLSV---LFLDLDRFKTINDTLGHSVGDQLLKAVAHRLTHCLRE 519 Query: 72 YN-------------------IVELLCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDK 112 + + ++ + L + L+ + A++D Sbjct: 520 GDTIARWGGDEFTILLPQIHQVNDVAKTAQRMLSALEQPFHLENHELYITPSIGIAIYDL 579 Query: 113 GTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTIND 172 + + ++ L +F + +K L Sbjct: 580 DGHDGETLIKHADMALYQAKQLGRNTYQFFCSGLSNGA-PERLNLEKSLRHALERQEFL- 637 Query: 173 HFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFT 227 + P V+ + +I EA+++ P + G I A Sbjct: 638 -LYYQPQVNIKTGKITGMEALLRWKHPEMGLVIPQLFMSVAEESGLIVAIGEWVLRTACA 696 Query: 228 M---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISR 284 L I++NL +PD + + L P+ + +E TE+ I Sbjct: 697 QNKTWQDQGLPPICIAVNLSARQF-RQPDLTGMIARILDETGLPPQYLDLEITETTAIQD 755 Query: 285 FDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAI 344 + ++ L+ GI +++D FG G++ L L +F + +KI + + +V + I Sbjct: 756 IEFTKRVLQELQDMGIQISMDDFGTGYSSLAHLQQFPLNTLKIDRSFVRDVAANSRDAQI 815 Query: 345 IQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPE 401 + A+I L + V A GV E+ LES E QG +F + L + + Sbjct: 816 VTAVIGLARGLNLNVVAEGVENDEQLNCLESLHCEEAQGYIFNRP-LEADAATEILQ 871 >UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4K931_THASP Length = 855 Score = 469 bits (1209), Expect = e-131, Method: Composition-based stats. Identities = 68/414 (16%), Positives = 132/414 (31%), Gaps = 40/414 (9%) Query: 21 EEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHYNIV 75 + + ++ + F ++ + ++ + I + R + V Sbjct: 445 DRLQVELAHAARLRCRLAVMFVDLDRFKRINDSLGHAVGDKLLVEIAARLRASLRDDDTV 504 Query: 76 ELL----------------CDYAPARRF---GKAGMELFDLRLHERDDVLQAVFDKGTSK 116 + ARR + + + L V AV+ + Sbjct: 505 ARMGGDEFLVVLNNLSGPDEAATMARRMVAELRRPVNVEGRELVVTTSVGVAVYPDDSRD 564 Query: 117 FQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF-- 174 + +R FE L L++ D Sbjct: 565 ADTLVKHADVAMYRAKDEGRNSFQLFEPAMNARSL-----ERLALETALHRALPRDELQL 619 Query: 175 AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAF--- 226 F P++ ++A EA+++ SP+ G I A Sbjct: 620 YFQPVMKAEGGELVAVEALLRWRHPDLGLVSPADFIPLAEDTGLIVPIGEWVLRSACEHH 679 Query: 227 TMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFD 286 + +N+ E + + + + + P + +E TES ++ D Sbjct: 680 RRWCEAGGAPLHMMVNISARQF-REEGFAAMVGSVLAETGMTPGDLTLELTESMLMDDTD 738 Query: 287 EFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQ 346 + L+A G+ +AID FG G++ L L RF D +KI + + + ++ A++ Sbjct: 739 RALARLDHLRALGVCLAIDDFGTGYSSLAYLKRFPIDELKIDRLFVRGIDRNTRDAALVS 798 Query: 347 AIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWP 400 AI+ SL ++V A GV T L G ++ QG F+ A+P Sbjct: 799 AIVSLGHSLGLRVVAEGVETAAHLDVLRRQGCDLAQGFHFSPPLPWEEFVKAYP 852 >UniRef50_Q3JBM4 Sensor protein n=4 Tax=Bacteria RepID=Q3JBM4_NITOC Length = 1499 Score = 469 bits (1209), Expect = e-131, Method: Composition-based stats. Identities = 76/430 (17%), Positives = 145/430 (33%), Gaps = 38/430 (8%) Query: 4 TLIYRSHIRDDEPVKKIEEMVSIANRRN-MQSDVTGILLFNGSHFFQLLEGP-----EEQ 57 L Y + + + R+ ++ + +L + F + + + Sbjct: 1052 QLAYHDVLTSLPNRTLFHKQLGELMNRSHLRGEQFAVLFLDLDRFKLVNDTLGHEVGDLL 1111 Query: 58 VKMIYRAICQDPRHYNIVELL---------CDYAPARRFGKAGMEL----------FDLR 98 +K I R ++V L R + ++ Sbjct: 1112 LKAAADRIVGCLRSNDMVARLGGDEFTVILEKIESPRVAAEVAAKICSVLSKVFAFSGQE 1171 Query: 99 LHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSD 158 ++ + +++ FR ++E E + + G + Sbjct: 1172 MYISTSIGISLYPGDGEDVSTLVKHADTAMFRAKEQG-NSYQFYEKGMETAAV-KRLGLE 1229 Query: 159 KELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGE 213 EL + + P ++ + I E +++ + PS + G Sbjct: 1230 AELRRALEQNELA--LYYQPQINLGTGEIATLETLIRWHHPEHGLIPPSEFIPLAEETGL 1287 Query: 214 IYTADLKSKALAFTMAHAL---ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPE 270 I + A T + G I++N+ L E D V ++ +K L P+ Sbjct: 1288 IASIGAWILREACTQMQSWLQRGFGPFHIAVNVSGRELERE-DLVDKIVTILKETGLPPK 1346 Query: 271 QIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQE 330 + +E TES V+ + L+ GI AID FG G++ L L F D +KI + Sbjct: 1347 WLELEITESVVMKGAGAAIPKFRRLREMGIKFAIDDFGTGYSSLNYLKSFPVDILKIDRC 1406 Query: 331 LITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 I +V + AII+ II SL ++V A GV T + +L++ + FQG ++ Sbjct: 1407 FIHDVVSNPDDAAIIKGIIALAHSLRLKVVAEGVETQAQEEFLKAHQCDRFQGFYLSEPL 1466 Query: 391 LNGIPSIAWP 400 A Sbjct: 1467 SAAEIEQAIL 1476 >UniRef50_A0LH12 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LH12_SYNFM Length = 702 Score = 469 bits (1209), Expect = e-131, Method: Composition-based stats. Identities = 73/447 (16%), Positives = 152/447 (34%), Gaps = 50/447 (11%) Query: 2 LTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSD-VTGILLFNGSHFFQLL-----EGPE 55 L L Y + + E ++ A Q +T IL + H ++ E + Sbjct: 257 LLQLAYHDPLTGLLNQHSMRERIARALELPGQHGRMTAILWVDIDHLKRVNATFGHELGD 316 Query: 56 EQVKMIYRAICQDPRH---------------------YNIVELLCDYAPARRFGKAGMEL 94 ++ + + R + V LL + + + L Sbjct: 317 VLLQRVADRMLGCARRTDRKARLGSDQSIKAVARMGGDDFVVLLTEISHVKGAANLAKRL 376 Query: 95 FD----------LRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEI 144 D ++ + AV ++ + ++ Sbjct: 377 LDDLSQPFVLDRHEVYVTASIGIAVHPHDGAEAGTLLKNADSAMHHAKAEGRNNFQFYTS 436 Query: 145 PAEDSWLFIADGSDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS---- 200 + + L + + +L + + P +D + + E +V+ + + Sbjct: 437 SGKTAAL-RSLTLEGDLRMALARRELFVE--YQPEIDLKTGETVGLETLVRWDHPTLGLI 493 Query: 201 -PSAIAVGQRKDGEIYTADLKSK---ALAFTMAHALELGDKMISINLLPMTLVNEPDAVS 256 P + G I + + H L +++NL + + + Sbjct: 494 PPLDFIPLAEETGLILPIGEWILSIACMQNAIWHKSGLEPIRVAVNLSGHQF-RQRNLIK 552 Query: 257 FLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLL 316 + + + L P+ + +E TES ++ +K LK+ G+ +A+D FG G++ L Sbjct: 553 TIAKTLTNSRLDPQHLELEITESTLMENAASTIHTVKELKSMGVRLAVDDFGTGYSSLSY 612 Query: 317 LSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESA 376 L RF D +KI + I +V + AI +AII +L ++V A GV ++ +L+ Sbjct: 613 LRRFPLDVLKIDRSFIRDVTINADDAAITRAIIAMAHNLNLEVIAEGVENEQQLQFLQEN 672 Query: 377 GIEMFQGDLFAKAKLNGIPSIAWPEKK 403 +M QG + + L EK+ Sbjct: 673 NCDMAQGYYYCRP-LTPAKLTKHLEKQ 698 >UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2A0_9PROT Length = 644 Score = 469 bits (1209), Expect = e-131, Method: Composition-based stats. Identities = 69/432 (15%), Positives = 137/432 (31%), Gaps = 38/432 (8%) Query: 2 LTTLIYRSHIRDDEPVKKIEEMVSI-ANRRNMQSDVTGILLFNGSHFFQLLEGP-----E 55 L TL R + ++ + +L + F + + + Sbjct: 209 LETLATRDELTGLINRFSYNHLLKKEVALAKRHMESLAVLFLDLDGFKNINDSLGHDVGD 268 Query: 56 EQVKMIYRAICQDPRHYNIVELL------------CDYAPAR-------RFGKAGMELFD 96 + ++ + R + V + D R + Sbjct: 269 QLLRETANRLSACIRESDTVARIGGDEFLIIMPGIKDVHDPRFLCERILNMIGQPYLIGT 328 Query: 97 LRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADG 156 + +++ + + ++ +F + F Sbjct: 329 QECFVGASIGISLYPLDGDNVESLVKNADTAMYQAKDSGRNAYKFFTPAMGEEA-FKRME 387 Query: 157 SDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKD 211 ++ L + P V+ S RI+ EA+++ SPS Sbjct: 388 MERALRYAIEKNQFK--LLYQPQVELSSGRILGVEALLRWTHPEWGPISPSVFISLIENT 445 Query: 212 GEIYTADLKSKALAFTMAHALEL----GDKMISINLLPMTLVNEPDAVSFLLNEIKANAL 267 I A A + +++N + D V + ++ + L Sbjct: 446 NLILPIGEWVLDEACKQNKAWQALHPGFPLRMAVNFAARQFA-QADLVETVAKALQKSGL 504 Query: 268 VPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKI 327 E + +E TE ++ + +++LK G+S+AID FG GF+ L L RF D +KI Sbjct: 505 AAEFLELEITEGSAMNDIELNIRKMQALKELGVSIAIDDFGTGFSSLAYLKRFPIDILKI 564 Query: 328 SQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFA 387 + + + AI+ I + SL ++V A GV T + +L G +M QG LF+ Sbjct: 565 DKSFLDEIQHGKKDAAIVATISEMAHSLGMEVIAEGVETKYQLEFLRGHGCDMIQGYLFS 624 Query: 388 KAKLNGIPSIAW 399 + + Sbjct: 625 RPVPPEQIAEIL 636 >UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling protein n=2 Tax=Rhodocyclaceae RepID=A1K4Z0_AZOSB Length = 880 Score = 469 bits (1208), Expect = e-131, Method: Composition-based stats. Identities = 66/416 (15%), Positives = 140/416 (33%), Gaps = 39/416 (9%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHY 72 ++ + + A R + Q+ V L + F + + + ++ + + R Sbjct: 458 DRLGQAILKARRNSTQAAV---LFLDLDRFKTINDTLGHEIGDGLLRQVTQRCLGAVRET 514 Query: 73 NIVE---------LLCDYAPARRFGKA----------GMELFDLRLHERDDVLQAVFDKG 113 + V +L D + G L L + A++ Sbjct: 515 DTVARQGGDEFVIVLPDLEHGQDAGTIARKILAALTEPCRLGPHELTVTGSIGIALYPGD 574 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 + + + +R ++ L + +L + Sbjct: 575 GADPSMLLRNADAAMYRAKADGRNGFQFYAADMNTHSLGEL-LLEHQLRGALDRNELR-- 631 Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTM 228 F P V+ I EA+++ P + G I A Sbjct: 632 LYFQPKVNAADGCIEGCEALLRWQHPDLGLLAPGRFVPAAEESGLIVPIGEWVLREACRQ 691 Query: 229 AHAL---ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 A L +++NL ++ D V+ + + + L + +E TE+ ++ Sbjct: 692 LRAWIDAGLAPVPVAVNLSGQQFAHQ-DIVALVREALAEHRLPAPMLELELTETMLMRDL 750 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 + + L+A G+++AID FG G++ L L +F + +KI + + ++ I Sbjct: 751 ERTIATLAELRAMGVTLAIDDFGTGYSSLAYLRQFDVNALKIDRSFVHDIRPGSSDGKIA 810 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPE 401 A+I +L + V+A GV T + +L G + QG LF + + + + Sbjct: 811 TAVIALAHNLGLTVTAEGVETAAQQHFLARHGCDQLQGFLFGQPEPAEAFAQRLAD 866 >UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=4 Tax=Rhizobiaceae RepID=A6U700_SINMW Length = 772 Score = 469 bits (1208), Expect = e-131, Method: Composition-based stats. Identities = 77/416 (18%), Positives = 142/416 (34%), Gaps = 40/416 (9%) Query: 17 VKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRH 71 ++++ M+ R+ + + + +F + + +E +K + + R Sbjct: 359 EEQVDGMLEEIRERDQCAV---LAFLDLDNFKLINDSLGHAAGDELLKAVAGRMRASVRK 415 Query: 72 YNIVE--------------------LLCDYAPARRFGKAGMELFDLRLHERDDVLQAVFD 111 + V +L R ++L L + A F Sbjct: 416 ADFVVRVGGDEFIILLNGLPKERDIVLSRLEDIRSAIAMPLQLQGRSLQVSCSMGVACFP 475 Query: 112 KGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTIN 171 + + +R L + F + EL Sbjct: 476 NQGRTAGELLANADMAMYRAKELGRDNIQVFTEEMAARAHERLQWQE-ELREAL--AGEE 532 Query: 172 DHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAF 226 F P ++ + RI A EA+++ N SPS + G I + A Sbjct: 533 FLLHFQPQMNLGTGRIFAAEALLRWNHPVRGIISPSVFIPLAEETGLIVPIGDWALRAAC 592 Query: 227 TM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVIS 283 L +IS+N+ E + S + +K L + +E TES ++ Sbjct: 593 RQLKAWQDAGLPPLIISVNVSARQF-RERNWASRVAEILKETGLEARYLELELTESLIMQ 651 Query: 284 RFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQA 343 + +L+A G+ +AID FG G++ L L RF R+KI + +T++ A Sbjct: 652 DVPGAIATMHALEAIGVHLAIDDFGTGYSSLSALKRFPVRRLKIDRSFVTDIPLDADDMA 711 Query: 344 IIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAW 399 I AII L ++V A GV + + +L+ AG + QG F++ Sbjct: 712 ITSAIISLAQKLGLRVIAEGVESEAQVEFLQKAGCDEIQGYFFSRPLSAEAFESLL 767 >UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JX80_DESAC Length = 678 Score = 469 bits (1208), Expect = e-131, Method: Composition-based stats. Identities = 65/420 (15%), Positives = 151/420 (35%), Gaps = 43/420 (10%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHY 72 +++++++ + RR + ++ + F + + + ++ + + R Sbjct: 268 DRLDQVMARSRRRQSRF---ALMFLDLDRFKGVNDTLGHAVGDAMLRQAAERLNECLREN 324 Query: 73 NIVELL-------------------CDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKG 113 + V L + + +L ++ V A++ Sbjct: 325 DTVARLGGDEFVIILSDYKEDANLPRVADKILKALSSPFDLGVREVYSSTSVGIAIYPDD 384 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 + + + + ++ + S ++++ + Sbjct: 385 GDEATDLLRHADMAMYAAKESGGDTFRFYSSEMNARAV-----SRMDMEANLRRALEQEE 439 Query: 174 FA--FHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKAL-- 224 F + P +D ++ ++ EA+++ P+ + I Sbjct: 440 FFIEYQPQIDLITNKVAGVEALLRWQHPQLGVIPPTQFIGLAEETNLILPLGEWVMRRVF 499 Query: 225 -AFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVIS 283 M + IN+ V +PD V + + PE + E TES V+ Sbjct: 500 EQCVMWKQEGYLPFRVGINVSGRQFV-QPDFVDMVCRLLDETGAAPELLEFEITESVVMK 558 Query: 284 RFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQA 343 D +++LK GI++AID FG G++ L L +R+KI + I+++ + +A Sbjct: 559 DVDAAVLTLEALKKLGINMAIDDFGTGYSSLSCLKHLPLNRLKIDKSFISDLQDNADDRA 618 Query: 344 IIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEKK 403 I++A I LE+ V+A GV T ++ +++ + QG F++ + AW K+ Sbjct: 619 IVEATIAMAKRLELGVTAEGVETEGQYGFVQKRECDEVQGFYFSRPLSPSEVADAWLIKR 678 >UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WEV3_VEREI Length = 981 Score = 469 bits (1207), Expect = e-130, Method: Composition-based stats. Identities = 68/432 (15%), Positives = 139/432 (32%), Gaps = 42/432 (9%) Query: 10 HIRDDEPVKKIEEMVSIANR-------RNMQSDVTGILLFNGSHFFQLLEGP-----EEQ 57 + +P+ + V +A R + +L + HF + + + Sbjct: 554 RLAHFDPLTDLPNRVLLAERTQRQIAQEQARGGQLALLFLDLDHFKNVNDSLGHRIGDIL 613 Query: 58 VKMIYRAICQDPRHYNIVELL------------------CDYAPARRFGKAGMELFDLRL 99 + + R + + V L + ++ L Sbjct: 614 LVAVARRLQSLIGPQDTVSRLGGDEFLLLLPATSAAHAAKVASALLTAVAQPFQIDPYEL 673 Query: 100 HERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDK 159 V A+ F Y + + +F + A + Sbjct: 674 STTLSVGIAMCPADGESFDTLYQRADAAMYSAKQSGRNRYGFFTADLQART-ARALQIEN 732 Query: 160 ELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEI 214 L + P V + +++ EA+++ + P+ G+I Sbjct: 733 ALRRALERQ--QFELHYQPQVSLGTGQVVGAEALLRWHHPELGVVAPAEFIPVAENSGQI 790 Query: 215 YTADLKSKALAFTMAHAL---ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQ 271 A A +L + +S+NL + P + ++ L + Sbjct: 791 VALGEWVLHTAARDAKRWLDMQLPLRAVSVNLSAVQF-RHPQLPEMVTRCLQQAGLPARR 849 Query: 272 IIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQEL 331 + +E TE + + L G+ +++D FG G++ L L RFQ ++KI Q Sbjct: 850 LELELTEGAAVDDPVAALAMMDQLHDRGVRLSMDDFGTGYSSLSCLKRFQIYKLKIDQSF 909 Query: 332 ITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 + ++ +AI+ AII+ +L +Q +A GV T + +L + G + QG LF++ Sbjct: 910 VRDLDDDANDRAIVSAIIRMAQALGMQTTAEGVETDGQLQFLRAQGCDEGQGYLFSRPLP 969 Query: 392 NGIPSIAWPEKK 403 K Sbjct: 970 ADAFEAYLRAMK 981 >UniRef50_C6X7I8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X7I8_METSD Length = 821 Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats. Identities = 69/418 (16%), Positives = 146/418 (34%), Gaps = 43/418 (10%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEG-----PEEQVKMIYRAICQDPRHY 72 +++++ +S A R N V + +F ++ + +E ++++ + + R Sbjct: 405 ERMQQAISEARRHNWTFSVA---FIDIDNFKRVNDSMGHSAGDELIRLLGQRLQSCLRDG 461 Query: 73 NIVELLC-------------------DYAPARRFGKAGMELFDLRLHERDDVLQAVFDKG 113 + V L R + +L + A F Sbjct: 462 DTVARLGGDEFVLLLTSQSLDESIHTVVQRIRNTIINPFIITGRQLTVTCSIGLANFPHD 521 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 + ++ + ++ G L++ N Sbjct: 522 GRNADTLLSNADSAMYQAKASGSNNFRFYAKEMN-----AELGHRLSLENDLWHALENQQ 576 Query: 174 F--AFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAF 226 + P V + +II EA+++ P DG I + A Sbjct: 577 LVLHYQPQVCMRNSQIIGMEALIRWQHPKLGMIPPLQFIPLSEDDGLIVPIGIWVMETAA 636 Query: 227 ---TMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVIS 283 +++NL L + D V + ++ + L P+ + +E TES ++ Sbjct: 637 HQNRQLQLAGYPPIRVAVNLSVRQLE-QKDLVHCIEKTLQHSGLDPQCLELEITESMLMH 695 Query: 284 RFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQA 343 +E + + G+ +++D FG G++ L L R +R+KI + I ++ + Sbjct: 696 NIEESIITLNRISDLGVQLSLDDFGTGYSSLSYLKRLPINRLKIDKSFINDITTTYNDAI 755 Query: 344 IIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPE 401 I ++II SLEIQV A GV + +++ +L G + QG L ++ + + Sbjct: 756 IARSIIALAHSLEIQVIAEGVESADQYAFLLENGCDEVQGYLLSRPRPFEEMEALLRD 813 >UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncultured bacterium RepID=C5JAR6_9BACT Length = 922 Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats. Identities = 69/407 (16%), Positives = 150/407 (36%), Gaps = 38/407 (9%) Query: 16 PVKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPR 70 + ++++ ++ A R N + ++L + F ++ + + +K + R Sbjct: 505 AMDRLKQAIAQAQRYNRKV---ALMLLDLDDFKKVNDTLGHAAGDLLLKEAALRLVDCLR 561 Query: 71 HYNIVELL-----------------CDYAPARRFG--KAGMELFDLRLHERDDVLQAVFD 111 + V L + + ++ + + A+F Sbjct: 562 EGDTVARLGGDEFVLLLPDLTDTSSAEVVAEKILAACNQPFDVGGHEAYIAGSIGIAIFP 621 Query: 112 KGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTIN 171 L + +R+ YF L + +L + Sbjct: 622 DDERDPILLMRNADAAMYRSKREGKGVFRYFTPEMNARAL-EHMRMESQLRHAIERNEMK 680 Query: 172 DHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAF 226 H + P+VD + R++ EA+++ + SP + G I + A Sbjct: 681 VH--YQPLVDSGTGRLVGAEALLRWSNPVLGEVSPEQFIPLAEETGLILSIGAWVLRTAC 738 Query: 227 TMAHALELGD--KMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISR 284 A + + D +++N+ V + + + + L P + +E TES ++ Sbjct: 739 RDAASWQRPDHEIFVAVNISGKQFQKRT-LVEIVRSSLNESGLPPACLELELTESVLLEH 797 Query: 285 FDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAI 344 E I+ L++ G+ AID FG GF+ + L RF D +KI + I ++ + + Sbjct: 798 TQETLSIIQELESLGVGFAIDDFGTGFSSISYLRRFPFDTLKIDRSFIKDLGDNEGDADL 857 Query: 345 IQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 +++II S+ ++V GV T + +L +G + QG L+++ Sbjct: 858 VKSIIAMANSMSLKVVGEGVETHGQREFLRLSGCHIAQGWLYSRPIP 904 >UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) and Response Regulator Receiver modulation n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SJL3_THIDA Length = 836 Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats. Identities = 68/415 (16%), Positives = 139/415 (33%), Gaps = 37/415 (8%) Query: 20 IEEMVSIANRRNMQSDVTG-ILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHYN 73 +E+ + + +S +L + +F ++ E + ++ + + R + Sbjct: 408 LEDQIEAVVAHSARSHKLASVLFLDIDNFKRINESLGHAAGDAMLRHAAQRLRDCVRPTD 467 Query: 74 IVE---------LLCDYAPA----------RRFGKAGMELFDLRLHERDDVLQAVFDKGT 114 +V +L D + R + + + ++ V +V+ Sbjct: 468 VVARYGGDEFTIVLGDLSHVDNIPAILHKVRAAFETPLVISGQEVYASFSVGVSVYPHDG 527 Query: 115 SKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF 174 + +R+ + ++ + +L Sbjct: 528 DDGATLLKNADTAMYRSKASGRNRYQFYAPEMNARG-QELLSLETDLRRALDRGEFR--L 584 Query: 175 AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTMA 229 + P +D RI EA+++ +P G I A T Sbjct: 585 HYQPQLDLRDNRIAGVEALLRWKHPRDGVIAPGDFVPLLEDTGLIVPVGEWVLRNACTQY 644 Query: 230 HAL---ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFD 286 A + IS+N+ E + + ++ + P + +E TES + Sbjct: 645 RACRESGVAPVRISVNVSARQF-REDTLLRQVEQVLREECMPPHHLELEITESTAMQDVA 703 Query: 287 EFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQ 346 + + +L A G+ +AID FG G++ L L RF D +KI Q I + + AI + Sbjct: 704 ATGDILAALDALGVRLAIDDFGTGYSSLAYLKRFPLDALKIDQAFIRDAPRDANIAAIAE 763 Query: 347 AIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPE 401 A I L ++V A GV T E+ +L ++ QG F++ + Sbjct: 764 ASISLGHKLGLEVVAEGVETAEQLAFLRRRACDLIQGFHFSRPLPADALTPFLAR 818 >UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMB6_9PROT Length = 922 Score = 467 bits (1204), Expect = e-130, Method: Composition-based stats. Identities = 69/425 (16%), Positives = 140/425 (32%), Gaps = 50/425 (11%) Query: 20 IEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEG-----PEEQVKMIYRAICQDPRHYNI 74 ++ + + + I+ + +F L + + + + + + R + Sbjct: 492 LDRLGHVLAGSTRSRNQGAIMFIDLDNFKALNDTQGHDVGDRLLAEVAQRLKSSVRQCDT 551 Query: 75 VELLC--------------------------------DYAPARRFGKAGMELFDLRLHER 102 V L D F L H Sbjct: 552 VARLGGDEFVVMVQDLAADSMVVAQVEAVAGKILAALDCPYRLVFDAELGRRNALNYHCT 611 Query: 103 DDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELD 162 + +F ++ L ++ +F+ + + + + +L Sbjct: 612 ASIGITLFGAHSTNVDELLKQADLAMYQAKDSGRNAIRFFDPEMQ-AAITSRVALEADLR 670 Query: 163 SCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTA 217 + + P V S R+ EA+++ + PS + G I Sbjct: 671 EAVEAG--QFQLYYQPQVVGESHRLTGAEALLRWHHSRRGMVPPSEFIPLAEETGLILPL 728 Query: 218 DLKSKALAFTMAHAL----ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQII 273 A E+ +++N+ + + D V +L + P+++ Sbjct: 729 GQWVLETACAQLATWASQPEMAQLTVAVNVSAHQI-RQTDFVDQVLAVLADAGANPQRLK 787 Query: 274 VEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELIT 333 +E TES ++S ++ + LK+ G+ ++D FG G++ L L R D++KI Q + Sbjct: 788 LELTESLLVSNVEDIIAKMTLLKSRGVGFSLDDFGTGYSSLSYLKRLPLDQLKIDQSFVN 847 Query: 334 NVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNG 393 V AI + I+ SL + V A GV T E+ +L +G +QG LF+K Sbjct: 848 EVLTDANDAAIAKMIVALAESLGLAVIAEGVETEEQRNFLAESGCHAYQGYLFSKPLPLA 907 Query: 394 IPSIA 398 Sbjct: 908 GFEQW 912 >UniRef50_Q2SF23 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SF23_HAHCH Length = 637 Score = 467 bits (1204), Expect = e-130, Method: Composition-based stats. Identities = 74/419 (17%), Positives = 152/419 (36%), Gaps = 39/419 (9%) Query: 17 VKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRH 71 V ++E+ V A+R Q +L + F ++ + + ++ + + + R Sbjct: 221 VDRLEQAVKAASRDRKQI---ALLFLDLDQFKRINDTLGHDAGDSLLQTVAQRLKNCVRA 277 Query: 72 YNIVELLC-----------------DYAPARRF--GKAGMELFDLRLHERDDVLQAVFDK 112 + V L + K ++L + + + Sbjct: 278 KDTVARLGGDEFTVLLTDIVDTFSVTPVATQILKALKEPIKLKKHEVIVSTSIGVTLAPT 337 Query: 113 GTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTIND 172 + + + L +R ++ ++ L ++EL Sbjct: 338 DGANADVLMKNADLALYRAKEHGRDRYHFYTEELNAHAL-KQLLMEQELRHALQ--FEEF 394 Query: 173 HFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSK---AL 224 F P V+ + +I++ EA+++ + S P + + G I + Sbjct: 395 TLGFQPQVNLTTGKIVSVEALIRWHHPSKGLVMPDSFISVAEETGLINPIGRWVLKNACM 454 Query: 225 AFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISR 284 M L I++NL ++P + + L PE + +E TES ++ Sbjct: 455 QMKMLQDLTGSAIKIAVNLSARQF-DDPKLEQSIEEALNETGLEPEWLELEVTESMLMGD 513 Query: 285 FDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAI 344 +K L+ G+S+AID FG+G++ L L + + +K+ +E + ++ + I Sbjct: 514 IQAVTNKLKRLRQTGVSLAIDDFGSGYSSLSYLKKLPVNALKVDREFVRDIPEDSNDMEI 573 Query: 345 IQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEKK 403 AII L+++V A GV T E+ +L + + QG F+K I E K Sbjct: 574 TSAIIAVAHKLQLKVVAEGVETAEQKEYLLANQCDFAQGYFFSKPLSFEDLYIYLNEHK 632 >UniRef50_Q74BV5 Sensory box/response regulator n=1 Tax=Geobacter sulfurreducens RepID=Q74BV5_GEOSL Length = 660 Score = 467 bits (1204), Expect = e-130, Method: Composition-based stats. Identities = 70/430 (16%), Positives = 141/430 (32%), Gaps = 49/430 (11%) Query: 18 KKIEEMVSIANRRNMQSD-VTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRH 71 + EE + A ++ + +L + HF ++ + + ++ + + R Sbjct: 233 FQFEERMEQALAFAQRNGFMMAVLFLDLDHFKKVNDTLGHHAGDRLLQEAAGRLMKCLRR 292 Query: 72 YNIVE---------------------LLCDYAPARRFGKAGMEL----------FDLRLH 100 + + LL D A + + + + Sbjct: 293 SDTLTHASREDASPFISRMGGDEFTILLTDLAHPQDAARVSQRIITALSKRYVIGGHEVF 352 Query: 101 ERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKE 160 + ++F + + L Y+ L + Sbjct: 353 VGASIGISLFPSDGEDCDQLLRNADTAMYHAKELGRNTYQYYSGSMNAMAL-ERLTLENN 411 Query: 161 LDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIY 215 L + P +D S R++ EA++ + P + G I Sbjct: 412 LRWALKRNEFR--LCYQPQLDAASGRVVGMEALLSWHRPGCDVVPPDDFIPLAEETGLIA 469 Query: 216 TADLKSKALAFTMAHAL---ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQI 272 + A A L +++NL + + ++A L P + Sbjct: 470 SIGEWVLWNACAQAVTWLHEGLPPVRVAVNLSSLQF-RSRRLAELVRKVLRATGLPPSHL 528 Query: 273 IVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELI 332 +E TE +S ++ A I+ LK G+ ++D FG G++ L LSRF D +KI + + Sbjct: 529 ELEITEGVFMSNEEDAAVVIRDLKKMGVRFSVDDFGTGYSSLSRLSRFPLDALKIDRSFV 588 Query: 333 TNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLN 392 ++ + AII +L + V A GV T E++ +L + G QG LF++ Sbjct: 589 RDISADPAAAGLTAAIIAMARNLGLNVIAEGVETHEQFAFLRANGCAEVQGFLFSQPLNP 648 Query: 393 GIPSIAWPEK 402 + + Sbjct: 649 DAAAAFLRAR 658 >UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS-1 RepID=Q1NJA1_9DELT Length = 941 Score = 467 bits (1204), Expect = e-130, Method: Composition-based stats. Identities = 77/401 (19%), Positives = 139/401 (34%), Gaps = 31/401 (7%) Query: 8 RSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGPEEQVKMIYRAICQ 67 R H D + E + A R N G G F LL + Sbjct: 550 RGHDVGDLLLTMAAERLQEAVRANDTISRQG-----GDEFMVLLNNLSPE---------- 594 Query: 68 DPRHYNIVELLCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQ 127 RH I + R +L H + ++F + + Sbjct: 595 --RHAAISQAGRVAEKIRAALDQPFDLDGYEHHIGVSIGLSLFLGHDTPADELFKRADAA 652 Query: 128 FFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPIVDPLSRRI 187 ++ Q +F+ + + L A +L + P RI Sbjct: 653 MYQAKHAGRNQVRFFDPEMQ-AELEQASALVVDLRQAIWQG--QFQLHYQPQT-ANDGRI 708 Query: 188 IAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTMAHALE----LGDKM 238 I EA+++ SP + I A A G+ Sbjct: 709 IGAEALLRWRHPERGPVSPMQFIPLAEESNLILAIGRWVLEEACGQLAAWADLPAAGNCK 768 Query: 239 ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAA 298 +++N+ +P+ V+ + + A P+ + +E TES V++ + ++ L+ Sbjct: 769 LAVNVSARQF-RQPEFVAEIRRILAATGADPKLLKLELTESIVMTELADTVSKMQELRDL 827 Query: 299 GISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQ 358 GI ++D FG G++ L L R +++KI + + ++ AI++ II +L+IQ Sbjct: 828 GIGFSMDDFGTGYSSLAQLKRLPLEQLKIDRAFVRDLGSDPHDDAIVETIIAMGRTLDIQ 887 Query: 359 VSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAW 399 V A GV T E+ L G + +QG LF++ + Sbjct: 888 VIAEGVETKEQLATLARYGCDAYQGYLFSRPVPAAQFAHLL 928 >UniRef50_Q0BFB8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=5 Tax=Burkholderia RepID=Q0BFB8_BURCM Length = 860 Score = 467 bits (1203), Expect = e-130, Method: Composition-based stats. Identities = 64/416 (15%), Positives = 135/416 (32%), Gaps = 43/416 (10%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEG-----PEEQVKMIYRAICQDPRHY 72 ++E+ +S A R + +++ + F + + + ++++ + + R Sbjct: 282 DRMEQAMSQARR---TGQLVAVMVLDLDRFKHINDSFGHSVGDGLLRVVAARLKRSVRDG 338 Query: 73 NIVELL-----------------CDYAPARRFGK--AGMELFDLRLHERDDVLQAVFDKG 113 + V L D + L + LH V ++ Sbjct: 339 DTVARLGGDEFVVMLVNLATQADADVIARKILDTFIEPFTLDEHDLHVTTSVGVSLCPTD 398 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTIN-- 171 + + + ++ L L++ N Sbjct: 399 GTNAETLLKTADAALYAAKEHGRNCYRFYT-----RELGARVEEQTILENALHQAVANHE 453 Query: 172 DHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAF 226 + P VD + +I EA+++ P G I A Sbjct: 454 LELYYQPKVDLKTGQISGVEALIRWRRPGIGVIPPDRFIPIAEDCGLILPIGEWVLRTAC 513 Query: 227 TM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVIS 283 I++NL + D + + ++ L P+ + +E TES ++ Sbjct: 514 MQAVAWRREGHPPIRIAVNLSARQF-RQQDVAAMVRTTLEETGLAPDSLELELTESVLMQ 572 Query: 284 RFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQA 343 + A ++ LKA G+ +++D FG G++ L L D +KI + + +V S + Sbjct: 573 DCNAIAHTLRELKALGVVLSLDDFGTGYSSLSYLKDLPIDVVKIDRSFLDDVTTSAEGAS 632 Query: 344 IIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAW 399 + ++II SL ++ A GV T + +L QG F+ + Sbjct: 633 LTRSIIAMAESLHMETVAEGVETEAQLSFLNRHRCHAMQGYYFSHPVTGDEIADML 688 >UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q608F9_METCA Length = 965 Score = 467 bits (1202), Expect = e-130, Method: Composition-based stats. Identities = 74/417 (17%), Positives = 141/417 (33%), Gaps = 42/417 (10%) Query: 19 KIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHYN 73 ++++++ A R Q +++ + F + + +E + + I + Sbjct: 551 RLDQLIEAAARDRKQI---ALVVLDLDRFKTINDSLGHSVGDELLCQVAERIQDCTGQGD 607 Query: 74 IVEL------------------LCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKGTS 115 V L + +++ Sbjct: 608 FVARQGGDEFVVILADSDAVRAARVANAMISAIAKPAVAGGRTLIVTPSLGISLYPHDAG 667 Query: 116 KFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF- 174 + + L +F L++ N F Sbjct: 668 DSESLIKSADAAMYHAKSLGRNTYQFFSAEMSAVA-----TERLALENALHQALSNGEFR 722 Query: 175 -AFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTM 228 + P ++ SRR+I EA+++ P + G I+ A Sbjct: 723 LYYQPQIEVCSRRLIGLEALIRWRHPEVGWVPPLRFIPLAEETGIIHRIGRWVLEEACRQ 782 Query: 229 ---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 A L +++NL P+ L + D + + L P + +E TE+ V+ Sbjct: 783 QREWQAAGLCIVPVAVNLSPLQLQKD-DFPEQVEALLSGCRLAPGLLELELTETAVMRDV 841 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 ++ ++ LK G +ID FG G++ L L+RF D++KI Q I +V + AI Sbjct: 842 GRMSDMLRKLKERGTRFSIDDFGTGYSSLGYLNRFPVDKLKIDQSFIRDVTRREDHAAIT 901 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEK 402 +AII L ++V A GV T E+ +LE AG + QG F++ + + Sbjct: 902 RAIIALAKQLHLKVVAEGVETAEQLEFLERAGCDGAQGFYFSRPVPADEIAGWLSRE 958 >UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=2 Tax=Proteobacteria RepID=Q1GXZ6_METFK Length = 1238 Score = 467 bits (1202), Expect = e-130, Method: Composition-based stats. Identities = 73/420 (17%), Positives = 148/420 (35%), Gaps = 45/420 (10%) Query: 20 IEEMVSIANRRNMQSDVTGILLF-NGSHFFQLLEG-----PEEQVKMIYRAICQDPRHYN 73 + + + A +M+ +G LLF + +F L + + ++ + + + R + Sbjct: 819 LLDRLEQALLNSMRLKRSGALLFLDLDNFKTLNDTHGHDFGDMLLEQVAQRLLNSVRITD 878 Query: 74 IVELLC------------------------DYAPARRFGKAGMELFDLRLHERDDVLQAV 109 V L L + + A+ Sbjct: 879 TVARLGGDEFVVVVENLSEQGCNAAQEASLVADKILLALSQPFRLSGYEHYSSCSIGVAL 938 Query: 110 F-DKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSP 168 F ++ L + +F+ + + + +++L Sbjct: 939 FCNEQQVTVDELLKRADLAMYEAKAAGRNTFRFFDPAMQ-ALITKRAAMEEDLRQALRRD 997 Query: 169 TINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKA 223 + + P VD ++ EA+V+ SP+A + G I Sbjct: 998 EMR--LYYQPQVDSQ-GSLLGAEALVRWEHPQQGLLSPAAFIELAEETGLILPIGEWVLR 1054 Query: 224 LAFTMAHALELGD----KMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTES 279 A A ++S+N+ L ++ D + + + +K P+ + +E TES Sbjct: 1055 TACMQLVAWAGRPETAGLVLSVNVSARQL-HQHDFIDRVFSILKETGANPQSLKLELTES 1113 Query: 280 EVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSG 339 ++ +E + LKA G+ ++D FG G++ L L R ++KI + + +V Sbjct: 1114 TLVENIEEMITKMNILKAMGVGFSMDDFGTGYSSLAYLKRLPLSQLKIDRSFVRDVLVDS 1173 Query: 340 PRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAW 399 +I+Q II L I+V A GV + E+ +LE G +QG LF + + + Sbjct: 1174 NDASIVQTIIALGHGLGIEVVAEGVESWEQQQFLEKHGCLEYQGYLFGRPQPAEQLEREF 1233 >UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=B9M1S6_GEOSF Length = 749 Score = 467 bits (1202), Expect = e-130, Method: Composition-based stats. Identities = 75/419 (17%), Positives = 146/419 (34%), Gaps = 39/419 (9%) Query: 17 VKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEG-----PEEQVKMIYRAICQDPRH 71 + ++E+M++ A R + +L + F + + ++ + + + Q R Sbjct: 316 MDRLEQMLTKARRDKTRVV---LLFLDLDRFKVINDTMGHAHGDQLLVQVANRLRQALRS 372 Query: 72 YNIVELLCDYAPARRFGKAGMELF-------------------DLRLHERDDVLQAVFDK 112 + + + F G +L ++ + A F Sbjct: 373 SDTLARIGGDEFVVLFTLEGPQLNVSPLAQHLIDSITSVYPISGRDVYASTSIGIATFPD 432 Query: 113 GTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTIND 172 + + + ++ + L Sbjct: 433 DGGDCNSLLRCADMAMYAAKEGGGKGYHFYSPEMNLKA-HARMEMETNLRHALER--EEF 489 Query: 173 HFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFT 227 F PIV+ R++ EA+++ ++ P + G I A Sbjct: 490 FLEFQPIVNARDGRLVGAEALLRWSDPEKGLIMPDMFIQVAEESGFIVPLGEWVLRTACR 549 Query: 228 M---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISR 284 L IS+N+ + + + + I+ + P + +E TE+ ++ Sbjct: 550 KMKDWREAGLPPFRISVNVSGRQFC-QANFTDTVCSIIRETGMDPSFLALEMTETSLMVD 608 Query: 285 FDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAI 344 + A+A+ LK IS+ ID FGAG++ L L +F DRIKI + I ++ +AI Sbjct: 609 VEATAKALMQLKELDISIVIDDFGAGYSSLGYLQKFPIDRIKIDRSFIRDLSSHANDKAI 668 Query: 345 IQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEKK 403 ++AII L++QV A GV T E+ +L+ G QG F + + E K Sbjct: 669 VEAIIAMAARLKLQVVAEGVETSEQLDFLKEQGCHEIQGFYFHRPLSEELFKTLLWEIK 727 >UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z1R5_9NEIS Length = 1086 Score = 467 bits (1202), Expect = e-130, Method: Composition-based stats. Identities = 73/402 (18%), Positives = 129/402 (32%), Gaps = 34/402 (8%) Query: 9 SHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGPEEQVKMIYRAICQD 68 H DE +++ + I G F L V Sbjct: 697 GHQTGDELLRETASRLEQVV-----GGRGQIARLGGDEFTLL-------VSHFASQATLS 744 Query: 69 PRHYNIVELLCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQF 128 +I+ +L + L L + +V+ S + + + Sbjct: 745 TLAEDILAVLA----------QPLWLEGQELIVTGSLGISVYPHDGSDARTLLKNADVAM 794 Query: 129 FRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPIVDPLSRRII 188 +R +F + ++ L F PIV + R+ Sbjct: 795 YRAKEAGKNTYQFFAAEMNAQAI-ERLQLERGLRQALERGE--FELHFQPIVAAATYRLE 851 Query: 189 AFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTMAHAL---ELGDKMIS 240 A E +++ SP + G I A L ++ Sbjct: 852 ALEVLLRWRHPELGLVSPVRFIPLAEETGLIRPIGDWVIRQACRQLAEWDCLGLHVPRLA 911 Query: 241 INLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGI 300 INL + + + + + ++ +E TES V+ E + LKA G+ Sbjct: 912 INLSARQFEQQG-LIMQVAGALAEAGIAAGRLELEMTESMVMQNPSEAVSLLGELKALGV 970 Query: 301 SVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVS 360 ++ID FG G++ L L RF D +KI + I + G AI +AI+ L V Sbjct: 971 RLSIDDFGTGYSSLSYLKRFPLDTLKIDRSFIEGLPGDGDNAAIAEAILAMARKLSFSVV 1030 Query: 361 AMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEK 402 A GV T + +L + G ++ QG LF++ ++ Sbjct: 1031 AEGVETEAQAAFLCAKGCQLLQGYLFSRPLPAAELPAFLQQR 1072 >UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q5P4W8_AZOSE Length = 1039 Score = 467 bits (1202), Expect = e-130, Method: Composition-based stats. Identities = 77/430 (17%), Positives = 142/430 (33%), Gaps = 44/430 (10%) Query: 2 LTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EE 56 LT L RS ++D +++ ++ A R G+L + F + + +E Sbjct: 606 LTGLANRSLLQD-----RLDRALAHARRH---GCKVGLLFLDLDGFKWINDSLGHDVGDE 657 Query: 57 QVKMIYRAICQDPRHYNIVELL---------CDYAPARRFG----------KAGMELFDL 97 + + R + R + V L D A G + L Sbjct: 658 LLVDVARRLNSCVRDEDTVARLGGDEFTVVVHDLADRADLGAIADKLVAVLREPFALRGA 717 Query: 98 RLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGS 157 R H V VF Q + + ++ ++ + + L Sbjct: 718 RHHISGSVGITVFPDDGDDVQTLLRNADIAMYKAKQAGKNRAQPYAPHMQADAL-ARVHL 776 Query: 158 DKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDG 212 + +L + PIVD S ++ EA+++ SP + G Sbjct: 777 EADLRMAVEQ--RAFELHYQPIVDCASGALVGAEALIRWKHPERGMISPLEFIPVAEECG 834 Query: 213 EIYTADLKSKALAFTMAHAL---ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVP 269 I +++N+ + E + + Sbjct: 835 LIVPIGEWVLREVVRQRRDWLARGHPPLRLTLNVSGVQF-REAGLPELVRTLLAEFGTAR 893 Query: 270 EQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQ 329 ++ E TES ++ + + +K GI A+D FG GF+ L L RF D +KI + Sbjct: 894 SSLVFEITESVLMGGSENVEARMCDIKEQGICFALDDFGTGFSSLSYLKRFPVDIVKIDR 953 Query: 330 ELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 + + +++AII SL ++V+A GV + E+ +L + G + QG L K Sbjct: 954 SFVRDCPDDRNDATLVEAIINMAHSLGLRVTAEGVESAEQREFLRALGCDYLQGYLIGKP 1013 Query: 390 KLNGIPSIAW 399 Sbjct: 1014 LAADAFEALM 1023 >UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P5U6_AZOSE Length = 740 Score = 466 bits (1201), Expect = e-130, Method: Composition-based stats. Identities = 65/433 (15%), Positives = 145/433 (33%), Gaps = 48/433 (11%) Query: 11 IRDDEPVKKI------EEMVSIANRRNMQSD-VTGILLFNGSHFFQLLEGP-----EEQV 58 + +P+ + ++ + + +L + F + + + + Sbjct: 315 LAHYDPLTLLPNRALLQDRMHQGLAHAAREGTRAAVLFLDLDRFKTINDSLGHLVGDHLL 374 Query: 59 KMIYRAICQDPRHYNIV-------------------ELLCDYAPARRFGKAGMELFDLRL 99 + + + + R + V + + + + L Sbjct: 375 QEVAQRLKASVREDDTVARRGGDEFIVMLPHVDSAEQAAHVAGKIIEAMEQTIPVNGYVL 434 Query: 100 HERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDK 159 + + +VF + + +R+ Q +F L Sbjct: 435 NVSFSIGISVFPDDAMDPDTLIRNADIAMYRSKASGRNQFQFFTADMNAHAL-----ERL 489 Query: 160 ELDSCALSPTINDHF--AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDG 212 L++ F F P + S II EA+++ +P+ + G Sbjct: 490 ALENDLHRAVERGEFRLMFQPQFE-GSGSIIGAEALLRWQHPQRGLVTPAEFIPVAEETG 548 Query: 213 EIYTADLKSKALAFTM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVP 269 I A L +S+N+ + ++ + + + + + + P Sbjct: 549 LIVPIGTWVLERACQQVRAWRDAGLKKITVSVNISALQF-SQKNLLELIRRLLAVSNIEP 607 Query: 270 EQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQ 329 + +E TES ++ + + LK G+ +AID FG G++ L L F ++KI Q Sbjct: 608 GTLELELTESVLMHDHVATSGLMSELKEMGVRMAIDDFGTGYSSLSYLRSFPISKLKIDQ 667 Query: 330 ELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 + ++ G AI AII +L ++V A GV T ++ +L++ + FQG F++ Sbjct: 668 SFVRDLSDGGDAGAITGAIIGLAKNLNMRVIAEGVETAQQASFLQAQCCDEFQGHFFSQP 727 Query: 390 KLNGIPSIAWPEK 402 + + Sbjct: 728 VSPEKFAELLRAE 740 >UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RPL3_RHORT Length = 855 Score = 466 bits (1201), Expect = e-130, Method: Composition-based stats. Identities = 82/435 (18%), Positives = 144/435 (33%), Gaps = 45/435 (10%) Query: 1 MLTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEG-----PE 55 MLT L R I + ++E+ + A R Q V + + F Q+ + + Sbjct: 417 MLTHLPNRHLI-----MDRLEQAMHQAQRTGRQVCV---MFLDLDRFKQINDSYGHSAGD 468 Query: 56 EQVKMIYRAICQDPRHYNIVELLC-----------------DYAPARRF--GKAGMELFD 96 E +K+ R + R + V L Y + + Sbjct: 469 EVLKLTARRLRNCVRISDSVGRLGGDEFIVILSNVEDQHAGAYIAEKILYSLSEPFPIGG 528 Query: 97 LRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADG 156 + V F + + + + F L Sbjct: 529 TEVFCIPSVGITYFPDHGETAPDLLRNADVAMYHAKQGGERRYAIFTPDMARRSL-ALLT 587 Query: 157 SDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKD 211 + +L F P V +I EA+++ P + Sbjct: 588 MESDLRHALAR--DEFELHFQPKVR-ADLTLIGAEALIRWRHPEKGLINPGDFIPLAEES 644 Query: 212 GEIYTADLKSKALAF---TMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALV 268 G I + A A L +S+N+ P ++ V + + L Sbjct: 645 GLILPIGRWTLREACDRVMSWRAEGLTIPSVSVNVSPRQFQDQT-LVETVRQILVETGLE 703 Query: 269 PEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKIS 328 PE + +E TE+ + + +++LK G++++ID FG G++ L L F D +KI Sbjct: 704 PEALDLEITETVMTGDVEHAVGTLRALKDLGVTLSIDDFGTGYSSLNYLKTFPIDTLKID 763 Query: 329 QELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 Q + +V SG AI+ II +L V A GV E+ +L S + FQG L+++ Sbjct: 764 QTFVRDVLHSGKDAAIVSTIIALARNLGFSVVAEGVEEIEQAEFLGSRDCQNFQGFLYSR 823 Query: 389 AKLNGIPSIAWPEKK 403 + K Sbjct: 824 PLPPAEFTTFLRTAK 838 >UniRef50_D2LZH2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LZH2_BACS4 Length = 1071 Score = 466 bits (1201), Expect = e-130, Method: Composition-based stats. Identities = 66/428 (15%), Positives = 150/428 (35%), Gaps = 36/428 (8%) Query: 4 TLIYRSHIRDDEPVKKIEEMVS-IANRRNMQSDVTGILLFNGSHFFQLLEG-----PEEQ 57 L+Y ++ ++ + + + +L+ + F + + ++ Sbjct: 149 QLVYHDNLTGLPNQYMLDSFLESEIYKAKYECTRLALLIIDLDRFKVINDSIGHTIGDQL 208 Query: 58 VKMIYRAICQDPRHYNIV------------------ELLCDYAPARRFGKAGMELFDLRL 99 +K + + + +++ ++L + ++ + Sbjct: 209 LKEVGKRLVSIVSKSDLLVRKGGDEFVIVLPSIKKDQVLKVVDNIINLLTSPFKIKSYDI 268 Query: 100 HERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDK 159 + ++F + L Y ++ Q +F + + + Sbjct: 269 FTSPSIGVSIFPEDGKTKDLLYKHAEFAMYQAKKSGNGQYHFFSSAEFNGDMN-PYTIEV 327 Query: 160 ELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEI 214 EL + P ++ + +I EA+++ SP++ G I Sbjct: 328 ELRKAIEQ--KQFTLHYQPRINLSTGELIGVEALIRWEHPKWGLISPASFIPIAEDSGLI 385 Query: 215 YTADLKSKALAFTMAHALELGDKM--ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQI 272 A ++ +S+NL P + + S + N + L P + Sbjct: 386 VPIGNWVLEEACKQNKIWQVSGMSCVVSVNLSPKQFAH-TNLASVIKNTLFNTGLDPHLL 444 Query: 273 IVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELI 332 +E TES + ++ +K GI V+ID FG GF+ L L +F + +KI + + Sbjct: 445 EIEITESMT-ADITRTVATLEEIKKLGIQVSIDDFGTGFSSLYYLKKFPVNTLKIDRSFV 503 Query: 333 TNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLN 392 + +H + + I++ II +L + V A G+ T E+ +L+ QG LF+K Sbjct: 504 SELHNNPDEETIVKTIISMARNLNLNVVAEGIETKEQLAFLQQHLCHEGQGFLFSKPLPP 563 Query: 393 GIPSIAWP 400 + +P Sbjct: 564 SVLEEKFP 571 >UniRef50_A0L8C6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=A0L8C6_MAGSM Length = 720 Score = 466 bits (1201), Expect = e-130, Method: Composition-based stats. Identities = 65/415 (15%), Positives = 135/415 (32%), Gaps = 37/415 (8%) Query: 20 IEEMVSIANRRNMQSD-VTGILLFNGSHFFQLLEG-----PEEQVKMIYRAICQ-DPRHY 72 + ++ + S + +L+ + F + + + + + + P Sbjct: 298 FHDRLNQTLVESADSGSIVAVLIVDLDRFKVINDSMGHEVGDSLLCEVATRLRAICPAKA 357 Query: 73 NIVEL--------LCDYAPARRFG----------KAGMELFDLRLHERDDVLQAVFDKGT 114 + L L + R + + ++ + V+ Sbjct: 358 TLARLGGDEFGIVLPNMTQNRDAALLAQEVLTRVAQPITISEVEFAVGASIGMTVYPLDG 417 Query: 115 SKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF 174 K + + + ++ + L + L + Sbjct: 418 EKPSVLMRNAESAMYHAKQSGRNNFQFYRSELNTASL-ARILLESGLRNAVDRQEFL--L 474 Query: 175 AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTM- 228 + P ++ + ++I EA+++ SP + G + + A Sbjct: 475 FYQPQMELATGKLIGMEALIRWQHPEQGMVSPGEFIPLAEETGLVIPMGQWALKEACRQS 534 Query: 229 --AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFD 286 IS+NL + PD ++ + + L P + +E TES + + Sbjct: 535 KVWMDQTGVPLRISVNLSGIQF-RLPDFTEMVMRTVGESGLPPHCLELELTESIAMGDVE 593 Query: 287 EFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQ 346 E E + L G+ +AID FG GF+ L L +F D +KI Q + N + AII+ Sbjct: 594 ETLEKLTILSRFGVLLAIDDFGTGFSSLSYLKKFPIDTLKIDQSFVRNCTRDPEDAAIIR 653 Query: 347 AIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPE 401 A I SL ++V A GV E+ +L + QG + + + + Sbjct: 654 AFINLAHSLNLEVIAEGVEHLEQLEFLAQESCDEIQGYFYGRPLSGDKFEMFMLD 708 >UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P6X4_VIBME Length = 919 Score = 466 bits (1201), Expect = e-130, Method: Composition-based stats. Identities = 68/439 (15%), Positives = 146/439 (33%), Gaps = 44/439 (10%) Query: 2 LTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTG-ILLFNGSHFFQLLEG-----PE 55 + L + + + + E + A + ++ G IL + F L + + Sbjct: 477 IKQLAFYDQLTGLPNRQLLMERLESARLNSQRNGQYGAILYLDLDDFKTLNDTRGHDTGD 536 Query: 56 EQVKMIYRAICQDPRHYNIVELLC---------------DYAPAR---------RFGKAG 91 + + ++ + + R + V + D A R Sbjct: 537 KFLTLVSQRLLDCVRRTDTVARIGGDEFVIILEQLDSDLDIASKRADLLCRKILDTLSKP 596 Query: 92 MELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWL 151 + ++ + +F T L ++ +F + L Sbjct: 597 YYIDNIEHFSTLSIGVTLFLGETKGIDELLKHADLAMYQAKGAGRNTHRFFNPEMQAKVL 656 Query: 152 FIADGSDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAV 206 ++ + P V ++ EA+++ SP Sbjct: 657 -EHAAMANDIRHALTRNEFT--LYYQPQV-THDGQLTGAEALIRWQHPKQGTISPIEFIP 712 Query: 207 GQRKDGEIYTADLKSKALAFTMAHALELGDKM----ISINLLPMTLVNEPDAVSFLLNEI 262 + G I A + + ++IN+ ++ V +L + Sbjct: 713 IAEETGLILPLGEWVLDQACQVLAVWQNSPLTDSLVLAINISAKQF-HQTGFVQQVLEAL 771 Query: 263 KANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQP 322 + P+++ +E TES + ++ + LK G+S ++D FG G++ L L R Sbjct: 772 QRYRANPDRLKLELTESMLHEDLEDTITKMSQLKKYGVSFSLDDFGTGYSSLNYLKRLPL 831 Query: 323 DRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQ 382 D++KI + + ++ + I + I+ S+ + V A GV T E+ + L S G FQ Sbjct: 832 DQLKIDKSFVRDLLTNSHDADIARTIVSLAKSMNLAVIAEGVETQEQRLALASYGCLDFQ 891 Query: 383 GDLFAKAKLNGIPSIAWPE 401 G LF++ +P+ Sbjct: 892 GYLFSRPVPLEAFPFNYPD 910 >UniRef50_C7RQ11 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RQ11_9PROT Length = 978 Score = 466 bits (1200), Expect = e-130, Method: Composition-based stats. Identities = 74/436 (16%), Positives = 149/436 (34%), Gaps = 48/436 (11%) Query: 10 HIRDDEPVKKIEEMV-------SIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQ 57 H+ +P+ + + R Q + +L+ N F + + +E Sbjct: 404 HLAHYDPLTDLPNRLLLRSLLQHALERAQRQGGKSAVLVINLDQFKNVNDSLGHALGDEL 463 Query: 58 VKMIYRAICQDPRHYNIV------ELLCDYAPARRFGKAGMELFD--------------L 97 + + + RH ++V E + ++ AG D Sbjct: 464 LLGVTARLKARLRHEDVVGRLGADEFVAILEASQDAENAGSIAGDLLAALAPPFVLADGH 523 Query: 98 RLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGS 157 + R + +VF + + R Q ++ L Sbjct: 524 ETYARASIGISVFPQDGKGANDLLRSADVAMHRAKQRGGNQYAFYTGELGHGALQ----- 578 Query: 158 DKELDSCALSPTINDHF--AFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRK 210 E+++ I + P +D S I+ EA+++ P + Sbjct: 579 RLEMETALRRALIQGELVLHYQPKLDLASGVIVGGEALLRWQRPGFGLVPPYRFIPLAEE 638 Query: 211 DGEIYTADLKSK---ALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANAL 267 G I M+++N+ + + L ++ +A+ Sbjct: 639 TGLIVPIGAWVINETCRQIRAWAEAGQPSVMVAVNVSARQFAG-GELEAVLATALRKHAV 697 Query: 268 VPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKI 327 P + +E TES +++ ++ E + +L+ G++VA+D FG G++ L LSRF D +KI Sbjct: 698 DPRMLGLELTESMLMAAPEQATERLDALRRVGVAVALDDFGTGYSSLSYLSRFPVDELKI 757 Query: 328 SQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFA 387 + IT++ I A+I + ++V A GV T + +L + QG LF+ Sbjct: 758 DRSFITHIVSDPKAANIATAVIALAHRMALKVVAEGVETETQLSYLRKNRCDQIQGYLFS 817 Query: 388 KAKLNGIPSIAWPEKK 403 + + K Sbjct: 818 APVPADEFATLVSQGK 833 >UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magnetospirillum RepID=Q2W154_MAGSA Length = 802 Score = 465 bits (1199), Expect = e-130, Method: Composition-based stats. Identities = 75/418 (17%), Positives = 146/418 (34%), Gaps = 39/418 (9%) Query: 17 VKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRH 71 ++ + +A R + G++ + F + + +E +K++ + R Sbjct: 388 EDRVHHAIEVAKREGRRI---GLMFLDLDRFKIVNDSLGHVAGDELLKVVSDRLRHTLRR 444 Query: 72 YNIV-------------------ELLCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDK 112 + V EL +EL ++H + A++ Sbjct: 445 SDTVARLGGDEFVVVLTHFQSTTELAEVAEKISAALDEPVELSGHKVHVGASIGIAIYPD 504 Query: 113 GTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTIND 172 F D +R +++ D L ++ L + Sbjct: 505 DGDNFNALMKDADTAMYRAKQKGRNTFCFYDSNMNDEALD-RLKLEEALRRALVRGE--F 561 Query: 173 HFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSK---AL 224 + P VD + R EA+++ N SP+ + I Sbjct: 562 QLFYQPQVDLQTGRTSGVEALIRWNSPERGQVSPALFIPVAEESNLISMIGWWVLEESCR 621 Query: 225 AFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISR 284 L +++N+ +N V + + + A++P Q+ +E TES V++ Sbjct: 622 QIAAWREAGLTGIKVAVNVSGRQFLNHA-LVECISDLMAQYAVLPSQLEIELTESTVMAE 680 Query: 285 FDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAI 344 D E + L+ GI V++D FG G++ L L R IK+ + + +V+ AI Sbjct: 681 PDRAIEQLTRLREIGIQVSVDDFGTGYSSLSYLKRLPLSTIKVDRSFVRDVNNQSDNAAI 740 Query: 345 IQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEK 402 + AI+ +L++ + A GV T E L+ AG QG +AK + + Sbjct: 741 VSAILGLADALDMSIVAEGVETEGEEQHLKDAGCIKVQGFRYAKPMPADQLAAWMLRQ 798 >UniRef50_Q39SC6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39SC6_GEOMG Length = 821 Score = 465 bits (1199), Expect = e-129, Method: Composition-based stats. Identities = 85/436 (19%), Positives = 149/436 (34%), Gaps = 42/436 (9%) Query: 2 LTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSD-VTGILLFNGSHFFQLLEG-----PE 55 + L Y + + + +S A R + V +L + F + + + Sbjct: 382 IRRLAYYDSLTGLPNRPLMMDRLSQAIRHARRHGEVVALLFLDLDRFKDVNDSQGHRVGD 441 Query: 56 EQVKMIYRAICQDPRHYNIVELLC-----DYAPARRFGKAGMELFD-------------- 96 ++ + + R + + L AP R L D Sbjct: 442 RLLQEVAARLSGCTRESDTLARLGGDEFVIIAPGVRAATDASLLADKILAALAEPFTLDR 501 Query: 97 LRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADG 156 LH + +F ++ + + +F + Sbjct: 502 QTLHIATSIGIVLFPSDGGNGEMLLQRADMAMYAAKDRGGNSYRFFSAEMNTRAV----- 556 Query: 157 SDKELDSCALSPTINDHFA--FHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQR 209 EL+ N F + P V+ + +++ EA+V+ N PS Sbjct: 557 ERHELEEDMRQALTNGEFFLMYQPQVNTGTWKVVGVEALVRWNHPRKGVILPSRFIPVAE 616 Query: 210 KDGEIYTADLKSKALAFTM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANA 266 + G I A L + +NL +E + V + + ++ Sbjct: 617 ETGFISKLGRWVLEEACRQGAQWQHDGLPPLQMGVNLCARQFTHE-EIVGTVSDVLQKTG 675 Query: 267 LVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIK 326 L E + +E TE+ ++ + + LKA G+ +AID FG G++ L F DRIK Sbjct: 676 LPSELLEIELTETMLM-DSETAVSTLGQLKALGVRLAIDDFGTGYSSFNYLKHFPLDRIK 734 Query: 327 ISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLF 386 I Q I ++ +S AII+AI+ SL +V A GV T E+ +L S QG F Sbjct: 735 IDQSFIRDIGQSRGNGAIIEAIVAVARSLGPEVLAEGVETEEQLRYLMSITCADIQGFYF 794 Query: 387 AKAKLNGIPSIAWPEK 402 ++ L S E Sbjct: 795 SRPLLPDDVSRLIRES 810 >UniRef50_B7KTV8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Methylobacterium extorquens group RepID=B7KTV8_METC4 Length = 772 Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats. Identities = 77/428 (17%), Positives = 149/428 (34%), Gaps = 41/428 (9%) Query: 9 SHIRDDEPVKKI------EEMVSIANRRNMQSDVTGILLFNGSHFFQLLE-----GPEEQ 57 +H+ + + + E + A R + +L + F + + G + Sbjct: 341 AHLAHHDALTGLPNRAFMSESLHQALRDPDR-ACLAVLSLDLDGFKAVNDRYGHPGGDAL 399 Query: 58 VKMIYRAICQDPRHYNIVELLC-----------------DYAPARRFGKA--GMELFDLR 98 + + + + +IV + R + L + Sbjct: 400 LTSVAERLQNEVSGGDIVARFGGDEFVVLNVAFTSPSEVEDLARRLIESLSTPVPLDNES 459 Query: 99 LHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSD 158 + + A + + +R +FE D L Sbjct: 460 VTIGVSIGIAFAPTDGRTAEELLKNADAALYRAKTAGRGTFRFFEPEM-DRKLQARQRLV 518 Query: 159 KELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGE 213 ++L + + + P V + I EA+++ SP + G Sbjct: 519 QDLRNALTRDELR--LDYQPFVKSETGVISGCEALLRWRHPERGMISPVEFIPLAEESGL 576 Query: 214 IYTADLKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQII 273 I + A A + IS+N+ P+ D +L + ++ L P ++ Sbjct: 577 IVPIGMWVIQQACREAASWP-STYRISVNVSPVQF-RSRDLPQVILAALTSSGLAPARLE 634 Query: 274 VEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELIT 333 VE TE+ +I D E ++ +++ G+ VA+D FG G++ L L RF D+IKI + + Sbjct: 635 VEVTEAVLIDDADTALEILRQIRSLGVRVALDDFGTGYSSLSYLRRFPFDKIKIDRSFVQ 694 Query: 334 NVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNG 393 + Q I+QAI L + V+A GV T ++ L G E QG L+++ + Sbjct: 695 ELDTRHDSQVIVQAIRDMAQGLGMTVTAEGVETDDQAKRLRQTGCEELQGFLYSRPRPAN 754 Query: 394 IPSIAWPE 401 + E Sbjct: 755 ELTFRHGE 762 >UniRef50_Q0F127 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F127_9PROT Length = 529 Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats. Identities = 66/417 (15%), Positives = 139/417 (33%), Gaps = 37/417 (8%) Query: 19 KIEEMVSIANRRNMQSD-VTGILLFNGSHFFQLLEG-----PEEQVKMIYRAICQDPRHY 72 + +++ + G+L + HF + + + + R Sbjct: 113 MFQHILAQEQENAKRKHFQLGVLYIDIDHFKVINDSFGYLKGNLLLGQVAERFKALLRGN 172 Query: 73 N---------IVELLCDYAPAR----------RFGKAGMELFDLRLHERDDVLQAVFDKG 113 + V LL A + ++G + + + A+F Sbjct: 173 DLIASLGGNRFVVLLTGLAHPEDATIVTLKLMQALESGFCIDNHEVVMTISTGIAIFPGD 232 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 + + +F+ + S + + E+ Sbjct: 233 GDDSEALLQSAEQSMYSVKADGGNNYQFFKASTQSSAIN-RLNMESEMRKAIERGEFV-- 289 Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKS---KALA 225 + P ++ S ++ EA+++ P + G I Sbjct: 290 LHYQPQINATSGHVVGMEALIRWQHPERGMIPPYHFISVAEETGMIVPIGEWVMYEACRQ 349 Query: 226 FTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 H L + +++NL + + + + +K + L P + +E TES ++ Sbjct: 350 NKAWHDAGLAELKVAVNLSARQFSDRK-LLDKVRHALKQSGLNPAFLELEITESVIMKDI 408 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 + ++ + + G+S+AID FG G++ L L RF D++KI + I +V S I+ Sbjct: 409 EATIALLEEIASMGLSLAIDDFGTGYSSLNYLKRFPIDKLKIDKSFIDDVISSEDDGKIV 468 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEK 402 +AII +L++ V GV E++ WL+ QG F+K + Sbjct: 469 EAIIGLSHNLKLNVICEGVEDAEQFAWLQERQCNEIQGYYFSKPLPADEFEAFVRSR 525 >UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L9X9_TOLAT Length = 1101 Score = 464 bits (1196), Expect = e-129, Method: Composition-based stats. Identities = 75/436 (17%), Positives = 152/436 (34%), Gaps = 48/436 (11%) Query: 9 SHIRDDEPVKKIEE-------MVSIANRRNMQSDVTGILLFNGSHFFQLLEG-----PEE 56 +H+ +P+ ++ + + +L+ + F + + + Sbjct: 666 AHLAHHDPLTQLPNRTLLTINLSHAIDLAVRNHHRIALLMLDLDRFKDVNDSFGHQIGDA 725 Query: 57 QVKMIYRAICQDPRHYNIV---------------ELLCDYAP-ARRFGKAGMELFDL--- 97 ++ + R + + R + + L D A + + F L Sbjct: 726 LLQEVARRLRRRVRISDTICRLGGDEFTVLIEGNPALHDVEHFAEDILQLLKDPFSLPNG 785 Query: 98 -RLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADG 156 + + +++ + + +R YF L A Sbjct: 786 REVIIGASIGISLYPEHGQTPKELLQQADAAMYRAKAHGRSCFRYFSDE-----LTRAAE 840 Query: 157 SDKELDSCALSPTINDHF--AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQR 209 +L+ + F P +D S RII EA+V+ + SP+ Sbjct: 841 QRLDLEVRLQRALRLNELCLYFQPQIDISSNRIIGAEALVRWQDPAHGLISPAQFIPVAE 900 Query: 210 KDGEIYTADLKSKALAFTM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANA 266 + G I A L +++N+ P+ N + + + N +K Sbjct: 901 ETGLIKQLGEWVLLEACRQGKEWQQKGLPAINLAVNISPVQFRN-SNILESVFNALKQTG 959 Query: 267 LVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIK 326 + +E TES +++ +E E + +L+ GI +AID FG G++ L L RF D +K Sbjct: 960 YPASLLELELTESALMTHENEAVEILSALRKYGIRLAIDDFGTGYSSLAYLKRFPLDVLK 1019 Query: 327 ISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLF 386 I + + ++ I AI+ +L ++V A GV T E+ +L+ G + +QG L Sbjct: 1020 IDKSFVDDIPHKKDDMEIAAAIVAMAHTLRLKVLAEGVETEEQLTFLKEQGCDCYQGYLM 1079 Query: 387 AKAKLNGIPSIAWPEK 402 + + Sbjct: 1080 SPPVPADQFEQLLRAQ 1095 >UniRef50_A1K2X7 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K2X7_AZOSB Length = 1070 Score = 464 bits (1196), Expect = e-129, Method: Composition-based stats. Identities = 81/412 (19%), Positives = 145/412 (35%), Gaps = 38/412 (9%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEG-----PEEQVKMIYRAICQDPRHY 72 ++E+ + A R + G+ + HF + + +E ++ + R Sbjct: 660 DRLEQAIVAARRHER---LLGVAFIDLDHFKVVNDNVGHRQGDELLRQAASRLAAVLRDG 716 Query: 73 N---------IVELLCDYAPARRFGKA----------GMELFDLRLHERDDVLQAVFDKG 113 + V LL D R + L D + +++ + Sbjct: 717 DTAARQGGDEFVVLLPDLGDERDAFRILGRLQAALAEPFRLDDRSFFVTCSIGVSLYPRD 776 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 + ++ +F + + + L S + + H Sbjct: 777 GGDGDTLLKHADIAMYQAKAAGRNVVRFFTAEM-NIQVRDRLQLEGALRSALENGEL--H 833 Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTM 228 AF P VD S ++I EA+++ P + G I A Sbjct: 834 LAFQPQVDGGSGQVIGAEALLRWQHPELGAVPPVRFIPLAEETGLIGPIGEWVLRAACRQ 893 Query: 229 AHALELGD--KMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFD 286 A E I++N+ PD + + + L P + +E TES ++ + Sbjct: 894 ARQWEQAGRRLRIAVNVSARQF-RSPDLPARIAEILDETGLPPALLELELTESMLMGDAE 952 Query: 287 EFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQ 346 + E + LK G+S+A+D FG G++ L RF D +KI Q + ++ +AI+ Sbjct: 953 QAEEMLHRLKQLGVSLALDDFGTGYSSFAYLQRFPIDTLKIDQSFVRSMVAGVRGEAIVV 1012 Query: 347 AIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIA 398 AII SL ++V A GV TP + L G + QG LF + A Sbjct: 1013 AIIALAHSLGMRVIAEGVETPLQQRQLFEFGCDELQGYLFGRPVPAAEFPHA 1064 >UniRef50_B0UQT2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Methylobacterium RepID=B0UQT2_METS4 Length = 797 Score = 464 bits (1196), Expect = e-129, Method: Composition-based stats. Identities = 64/418 (15%), Positives = 136/418 (32%), Gaps = 43/418 (10%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHY 72 + + E + +L+ + F + + ++ ++ + + + + Sbjct: 381 ELLAERFAARRHDPAPF---ALLILDLDRFKAVNDTLGHGMGDDLLRRVAQRLLRVVGAA 437 Query: 73 NIVELL-------------------------CDYAPARRFGKAGMELFDLRLHERDDVLQ 107 ++V L A + L + Sbjct: 438 DVVARLGGDEFAILLAGAGDAAGAGDLAAIQAAAERAIEILSRPFVIDGHILDIGASIGI 497 Query: 108 AVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALS 167 A+ + + L + + FE + + +L Sbjct: 498 ALAPQDGDTPEQLLRSADLALYGAKEEGRGRFRMFEGTMNAR-MQARRSLELDLRRALAR 556 Query: 168 PTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSK 222 F P VD + R EA+++ + SP + G I Sbjct: 557 QE--FELYFQPQVDARTGRFDGAEALIRWHHPERGLVSPGEFIPLAEETGLIGPLGEWVL 614 Query: 223 ALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVI 282 A A +++NL P+ +P + + + L ++ +E TE ++ Sbjct: 615 RTACAEARRWATP-LPVAVNLSPVQF-RDPRLAATVRGILAETGLPGSRLEIEITEGTLM 672 Query: 283 SRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQ 342 + L+ GI +++D FG G++ L L RF D+IKI Q + + Sbjct: 673 QDEHRTLAVLTELRGLGIRISMDDFGTGYSSLSYLRRFPFDKIKIDQSFVRQTPQDRDSV 732 Query: 343 AIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWP 400 AI++AI SL I+ +A GV T ++ +++ G + QG L+++ + + Sbjct: 733 AIVRAIAMLGRSLGIKTTAEGVETDQQSVFIAGEGCDQLQGYLYSRPVPAESIAELFR 790 >UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6N2_9PROT Length = 1043 Score = 464 bits (1195), Expect = e-129, Method: Composition-based stats. Identities = 76/421 (18%), Positives = 146/421 (34%), Gaps = 44/421 (10%) Query: 20 IEEMVSIANRRNMQSDVTGILL-FNGSHFFQLLEG-----PEEQVKMIYRAICQDPRHYN 73 + A +S G LL + F +L + ++ + + R + R + Sbjct: 626 FADRFRQAISAGARSGRYGALLSLDLDQFKRLNDTFGHSMGDKLLIEVARRLTSCVREED 685 Query: 74 IVELLC------------------------DYAPARRFGKAGMELFDLRLHERDDVLQAV 109 V + R +L H + + Sbjct: 686 TVARMGGDEFLVILNGLGSEQNEAAIRAELIAEKIRNELCRPYQLDKTEHHSSSSIGIVL 745 Query: 110 FDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPT 169 F + + +++ +F+ ++ L + L Sbjct: 746 FRGHSDDPERLLAHVDTAMYQSKAKGRNAICFFDSSMQE-ILEKRGQLETALRGALERKE 804 Query: 170 INDHFAFHPIVDPLSRRIIAFEAIVQKN-----EDSPSAIAVGQRKDGEIYTADLKSKAL 224 + +D S R I EA+++ N SP + G I Sbjct: 805 FL--LHYQLQMD-SSGRPIGAEALLRWNNAKLGSVSPVQFIPVAEESGLILPIGHWVLET 861 Query: 225 AFTMAHALELGD----KMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESE 280 A + I++N+ + E V+ + N ++ + + P + +E TES Sbjct: 862 ACAQLARWQSDPRFNRLCIAVNVSAIQF-REAAFVAKVRNVLQQSGIQPWLLKLELTESL 920 Query: 281 VISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGP 340 V+ ++ +++LK G+ ++D FG G++ L LSR D++KI Q + ++ Sbjct: 921 VLDDINDSILKMEALKNLGVKFSMDDFGTGYSSLSYLSRLPLDQLKIDQSFVRDITTDQH 980 Query: 341 RQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWP 400 AI+Q II SL ++V A GV T E+ +L+ G + +QG L+AK I Sbjct: 981 DAAIVQTIISMALSLGMEVIAEGVETEEQREFLDLRGCQAYQGYLYAKPMPIEELEIKLA 1040 Query: 401 E 401 + Sbjct: 1041 Q 1041 >UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L987_TOLAT Length = 1098 Score = 464 bits (1195), Expect = e-129, Method: Composition-based stats. Identities = 75/420 (17%), Positives = 155/420 (36%), Gaps = 44/420 (10%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEG-----PEEQVKMIYRAICQDPRHY 72 +K++ + A + + +L+ + HF + + +E + + + Q R Sbjct: 669 QKLDSALQHAMLNSTRV---ALLMLDLDHFKNVNDSFGHHFGDELLHQVSARLKQQLRES 725 Query: 73 NIVELL----------CDYAP------ARRFGKAGMELFDL----RLHERDDVLQAVFDK 112 ++V L + +P A R A + F L + + +++ + Sbjct: 726 DVVCRLGGDEFTVLLQNNPSPDDVSLLAERIIHALHQPFLLSNAREVMIGTSIGISLYPE 785 Query: 113 GTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTIND 172 S + +R + YF LF+ + EL+ Sbjct: 786 HGSTAEELMQQADTAMYRAKHDGRDGYRYFSEE-----LFLKAKARLELEQRLHRAITGQ 840 Query: 173 HF--AFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSK--- 222 F + P + + +II EA+++ ++ PS + G I Sbjct: 841 EFKVFYQPQISIKTNQIIGAEALLRWDDPEYGLIPPSEFISVAEETGLIQNIGEWVLYET 900 Query: 223 ALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVI 282 L +++NL P+ L + D + + + + +E TES ++ Sbjct: 901 CRQGRDWLDQHLPPINLAVNLSPLQL-HHGDVRQLIGTILHNSGFPAHHLELELTESALM 959 Query: 283 SRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQ 342 + +E + ++ L+ GI +AID FG G++ L L +F D +KI + + ++ Sbjct: 960 EQQEETVKILQGLRQQGIRIAIDDFGTGYSSLAYLKQFPLDVLKIDKRFVEDIPHERDDM 1019 Query: 343 AIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEK 402 I I+ SL + V A GV T + +LE G + +QG L++ + ++ Sbjct: 1020 EIAATIVAMGHSLRLTVLAEGVETKAQLEFLEQQGCDYYQGYLYSMPLPAEEFAQLLSQQ 1079 >UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1A0_9PROT Length = 1011 Score = 464 bits (1195), Expect = e-129, Method: Composition-based stats. Identities = 73/419 (17%), Positives = 141/419 (33%), Gaps = 44/419 (10%) Query: 20 IEEMVSIANRRNMQSDVTG-ILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHYN 73 +++ + A +S +G IL + +F L + + ++ + + R + Sbjct: 595 LQDRLQQALASCGRSGKSGAILFIDLDNFKNLNDTLGHDIGDLLLEKVAIRLSSCVREGD 654 Query: 74 IVELLC----------------------DYAPARRFG--KAGMELFDLRLHERDDVLQAV 109 V + + ++ +L + + Sbjct: 655 TVARIGGDEFVVMLEDLSDNILDAAEQTESVGSKILASLNVPYQLGIHTYDNSPSIGATL 714 Query: 110 FDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPT 169 F+ + + ++ +F+ + S L + EL Sbjct: 715 FNDNHNSIDELLKQADIAMYQAKKAGRNTMRFFDPRMQQS-LSARLALELELRKAIEK-- 771 Query: 170 INDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKAL 224 + VD + R + EA+++ P+ + G I Sbjct: 772 DQFQLYYQIQVD-ETHRPLGAEALLRWMHPEHGLMAPAEFIPMAEETGLIVPIGWWVLET 830 Query: 225 AFTMAHALELGDKM----ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESE 280 A T A E +SIN+ ++PD V + + + P + +E TES Sbjct: 831 ACTQLKAWEKDPLTRNLVLSINVSAKQF-HQPDFVDQVQAAVDHYGIDPALLKLELTESI 889 Query: 281 VISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGP 340 ++ D + + +LK G+ ++D FG G++ L L R D++KI Q + + Sbjct: 890 LLENVDTTIKRMSALKKTGVGFSLDDFGTGYSSLQYLKRLPLDQLKIDQSFMQEITSDSS 949 Query: 341 RQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAW 399 AI+ II S+++ V A GV T E+ L G FQG LF+K Sbjct: 950 DMAIVSTIIAMAQSMQMGVIAEGVETEEQRQLLLRKGCNHFQGYLFSKPVPVEQFEKLL 1008 >UniRef50_Q31G31 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31G31_THICR Length = 891 Score = 464 bits (1195), Expect = e-129, Method: Composition-based stats. Identities = 67/406 (16%), Positives = 145/406 (35%), Gaps = 39/406 (9%) Query: 17 VKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEG-----PEEQVKMIYRAICQDPRH 71 + ++ + + A R D +L + F ++ + + + + + + R Sbjct: 476 LDRLTQAIHQAQRN---HDKVALLFIDLDRFKEINDSFGHASGDLVLIECGKRLKKAIRE 532 Query: 72 YNIVELLC-----------------DYAPARRFGKAGMELFDLR--LHERDDVLQAVFDK 112 + V L + +F H + ++F Sbjct: 533 IDTVARLGGDEFTILIDELKTNNVIINVVKKIIKTLSDPIFVNENIFHITASIGISIFPN 592 Query: 113 GTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTIND 172 + + ++ ++ + + L + Sbjct: 593 DGTDANQLLQNADAAMYQAKEDGKNTYHFYTKEMTEQAYN-RLLMENNLRDALDNQ--QF 649 Query: 173 HFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALA-- 225 + P VD + +I+ FEA+V+ N + P + G I + A+A Sbjct: 650 ELYYQPQVDITTNKIVGFEALVRWNHEQKGIIPPDHFIPLAEETGLIIPLGKQIIAMASQ 709 Query: 226 -FTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISR 284 + H L + I+IN+ L + L + N P+ I +E TES V+ Sbjct: 710 TISEWHQANLTNARIAINVSAKQL-RDSRFFHNLNTALNKNNCQPDWIEIEITESSVMQN 768 Query: 285 FDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAI 344 + + + L+ GI+++ID FG G++ L L + ++KI + ++N+ + I Sbjct: 769 PELAIKLLSKLRRKGITISIDDFGTGYSSLAYLKKLPITKVKIDRSFVSNLPQDKDDAEI 828 Query: 345 IQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 +AII SL + + A G+ T E+ ++ G ++ QG +++ Sbjct: 829 TKAIISMSQSLNLDIIAEGIETQEQQNFVLQEGCKLIQGYYYSRPL 874 >UniRef50_A1K569 EAL/GGDEF/PAS/PAC-domain containing signalling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K569_AZOSB Length = 947 Score = 464 bits (1195), Expect = e-129, Method: Composition-based stats. Identities = 73/431 (16%), Positives = 138/431 (32%), Gaps = 47/431 (10%) Query: 10 HIRDDEPVKKIE--EMVSIANRRNMQSD-----VTGILLFNGSHFFQLLEGP-----EEQ 57 H+ + + + + ++ R +Q + +L + F + + + Sbjct: 508 HMAEYDALTDLPNRSLLHDRARAAIQGAARTDRLAALLFIDLDRFKNVNDSLGHSVGDAL 567 Query: 58 VKMIYRAICQ---------DPRHYNIVELLCDYAPARRFGKAGMELFD----------LR 98 ++ + + P V LL + ++ D Sbjct: 568 LRQAAKRLASLLHGGDTIARPGGDEFVMLLAEITDRAVAANRAAQIIDAFSTPFRVEHYE 627 Query: 99 LHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSD 158 L + A+ + + +F + Sbjct: 628 LSVTPSIGIAIAPDDGVDADTLLRNADAAMYHAKESGRNTYRFFTDEMS-----LRVRER 682 Query: 159 KELDSCALSPTINDHF--AFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKD 211 EL++ D F + P RI+ EA+V+ P Sbjct: 683 LELENLLRQAMSRDEFEVFYQPQFGLSDHRILGCEALVRWRHPERGLIAPERFIPLAEDT 742 Query: 212 GEIYTADLKSKALAF---TMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALV 268 G I + A A LGD +++N P+ + + + + + L Sbjct: 743 GLIVAIGRRVLETACHTAQGWRAAGLGDIPVAVNASPVQI-HHGNFAETVAEVLAETGLP 801 Query: 269 PEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKIS 328 + +E TES +++ A + +L+ G+ +AID FG G++ L L RFQ D++KI Sbjct: 802 ARLLEIELTESTLMADAAPVAATLAALQDMGVRLAIDDFGTGYSSLAYLKRFQLDKLKID 861 Query: 329 QELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 + I ++ I AII SL + V A GV T + +L G QG LF+ Sbjct: 862 RSFINDLPGDPDDANITVAIIGIARSLGMSVIAEGVETAAQERFLVDQGCAEGQGYLFSP 921 Query: 389 AKLNGIPSIAW 399 + Sbjct: 922 PVPVESMTALL 932 >UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WHK3_VEREI Length = 859 Score = 464 bits (1195), Expect = e-129, Method: Composition-based stats. Identities = 74/401 (18%), Positives = 145/401 (36%), Gaps = 28/401 (6%) Query: 11 IRDDEPVKKIEEMVSIANRRNMQSDVTG--ILLFNGSHFFQLLEGPEEQVKMIYRAICQD 68 + D +++++ R + S + F G F +LE + + Sbjct: 465 LNDTLGHDMGDQLLAQVATRLVASVRAADTVARFGGDEFVVMLE-------ALAPDLRTA 517 Query: 69 PRHYNIVELLCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQF 128 +V L + + + +F + L Sbjct: 518 TAQAEMVA-----DKLLASLNQPFALDGGQHYSTLSIGVTLFGEQRLSVDELLKRADLAL 572 Query: 129 FRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPIVDPLSRRII 188 ++ +F+ + + + + +L + + P+VD R++ Sbjct: 573 YQAKAAGRNTQRFFDPDMQ-AAVNARSNLEADLRQGLARAELL--VYYQPVVD-HQARLM 628 Query: 189 AFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTMAHALELGD----KMI 239 EA+V+ P+ + G I A I Sbjct: 629 GAEALVRWRHPQRGMIGPADFIPLAEQTGLILPLGQYVLQTACAQLQRWSQHPDTAGLSI 688 Query: 240 SINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAG 299 S+N+ +P V+ +L+++K++ P ++ +E TES ++ ++ + LK+ G Sbjct: 689 SVNVSARQF-RQPGFVAQVLHQLKSHGADPRRLKLELTESLLLGDIEDTIARMAQLKSEG 747 Query: 300 ISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQV 359 + A+D FG G++ L L R D+IKI Q + V AI++ I+ SL++QV Sbjct: 748 VGFALDDFGTGYSSLSYLKRLPLDQIKIDQSFVREVLADPNDAAIVRTILALAKSLDLQV 807 Query: 360 SAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWP 400 A GV T + +L+ G E FQG LF + + + A Sbjct: 808 VAEGVETTGQLSFLQLHGCEGFQGYLFGRPVPMEVFACAHR 848 >UniRef50_C7RNY7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNY7_9PROT Length = 1003 Score = 464 bits (1194), Expect = e-129, Method: Composition-based stats. Identities = 59/431 (13%), Positives = 133/431 (30%), Gaps = 51/431 (11%) Query: 17 VKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRH 71 +++++ + A R N +L + F ++ + + ++ + + + R Sbjct: 542 LERLDRELLRARRTN---HRMALLFLDLDGFKRINDTLGHSAGDCLLQTVADRLQEKLRA 598 Query: 72 YNIVELLCDYAPARRFGKAG-------------------------------MELFDLRLH 100 + + F + G + + + Sbjct: 599 GAFIARPALDESSLHFARLGGDEFTVVLPDVDTVETACLIAQRIQELLGRPTLIGEQEIA 658 Query: 101 ERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKE 160 + A+F + + ++ + + + Sbjct: 659 VTSSIGIALFPDDGADAATLLKHADTAMYYAKEQGRNNWQLYDRT-LTTRTTARLALEGD 717 Query: 161 LDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIY 215 + + P V I+ EA+++ SP+ + G I Sbjct: 718 IRKGLERGEFR--LFYQPQVSADDGTIVGVEALIRWQHPQQGLVSPARFIPVAEESGLIV 775 Query: 216 TADLKSK---ALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQI 272 + +++N+ L + + I A + +++ Sbjct: 776 PIGEWVLTAACRQVRQWQQSGVPVPRVAVNVSARQLG-AAGFLDTVAAIIVATGIAADRL 834 Query: 273 IVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELI 332 +E TES ++ + + + L+A G+ +ID FG G++ L + RF +KI Q + Sbjct: 835 ELELTESILMDPEAKRIKGLSRLRAMGVHFSIDDFGTGYSSLSYIKRFPIGTLKIDQSFV 894 Query: 333 TNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLN 392 + + I AII SL ++V A GV T E+ +L+ A QG LF+ Sbjct: 895 HGLPQDADDAGITTAIISMARSLNLEVVAEGVETREQLAFLQRALCPKLQGYLFSYPLPP 954 Query: 393 GIPSIAWPEKK 403 + Sbjct: 955 DEMEAILRRGR 965 >UniRef50_C6D7W4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=C6D7W4_PAESJ Length = 1095 Score = 464 bits (1194), Expect = e-129, Method: Composition-based stats. Identities = 73/419 (17%), Positives = 145/419 (34%), Gaps = 41/419 (9%) Query: 17 VKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRH 71 + +E + A V + + F + + ++ + + + + R Sbjct: 523 EEMLENALETAKTARRHFAV---MYLDMDRFKYINDSLGHAVGDQLLIAFSKRLQEQIRE 579 Query: 72 YNIVELL----------------CDYAPARRFGKAGMELF---DLRLHERDDVLQAVFDK 112 + + ARR + E F D L + +++ Sbjct: 580 TDFAARMGGDEFTVILPHIRDNNSAIEVARRIIERTREPFYIEDYELFITTSIGISIYPN 639 Query: 113 GTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTIND 172 + FR L F + + +K+L + Sbjct: 640 DGDDSSTLMKNADSALFRAKDLGKNGYQIFTSSM-NVQTYKVFTLEKDLRKAIQRDEL-- 696 Query: 173 HFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSK---AL 224 + P V+ + I+ EA+++ N SP+ + G I + K Sbjct: 697 EMYYQPKVNIHTGEIVGAEALIRWNHPEWGLVSPNEFIPISEETGLILSLGNWVKRTVCR 756 Query: 225 AFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISR 284 L ISIN+ ++ D + + + L P + +E TES ++ Sbjct: 757 QNKEWQLAGLKPIPISINVTAKRFLS-KDFMDAIQQILAETGLEPHYLEIEITESSLLEN 815 Query: 285 FDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQ--PDRIKISQELITNVHKSGPRQ 342 + + SL G+++++D FG G++ L L RF+ + +KI + I ++H+ Sbjct: 816 AETVMHTLDSLNKLGVTISLDDFGTGYSSLSYLKRFKHTINILKIDRSFIHDLHQGSDDN 875 Query: 343 AIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPE 401 AII AII+ + + V A GV T E+ L+ ++ QG LF++ + Sbjct: 876 AIISAIIQLAQHMNMSVVAEGVETGEQLHILKLLKCDLVQGYLFSRPVQAEAFAQLLKR 934 >UniRef50_Q07P60 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=12 Tax=Rhizobiales RepID=Q07P60_RHOP5 Length = 834 Score = 464 bits (1194), Expect = e-129, Method: Composition-based stats. Identities = 75/425 (17%), Positives = 151/425 (35%), Gaps = 42/425 (9%) Query: 9 SHIRDDEPVKKI-------EEMVSIANRRNMQSDVTGILLFNGSHFFQLLEG-----PEE 56 +H+ + + + E + R + V +L + F + + + Sbjct: 403 AHMAHHDGLTNLPNRSFYQERLQHALEARPAECHV-AVLCVDLDLFKNVNDSFGHPVGDR 461 Query: 57 QVKMIYRAICQDPRHYNIVELL-----------------CDYAPARRFGK--AGMELFDL 97 ++++ + + R N+V L AR + ++ L Sbjct: 462 LLQLVAERLRLEVRGANMVARLGGDEFAIVLVSVVSPNEASDFAARVIERLSVPYDVDGL 521 Query: 98 RLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGS 157 + + A+ + + + +R +FE D Sbjct: 522 EVVIGASIGIALSPGDGDNGEDLLRNADMALYRAKESGGGNHHFFEKEM-DRQAQKRRDM 580 Query: 158 DKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDG 212 + +L + P+VD R+ FEA+++ SP+ G Sbjct: 581 EIDLRYAFAKG--QFELYYQPLVDVARDRVAGFEALLRWRHPERGMISPADFIPVAEDIG 638 Query: 213 EIYTADLKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQI 272 I A A + I++NL P+ + V ++ + + L P ++ Sbjct: 639 LIVGLGEWVLRQACAEAATWP-SEIKIAVNLSPVQF-RSRNLVQAVIGALAQSGLSPRRL 696 Query: 273 IVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELI 332 +E TES ++ + + ++ G+ +++D FG G++ L L F D+IKI + + Sbjct: 697 ELEITESVFLAETEANLATLHQMRDLGVRISMDDFGTGYSSLSYLRSFPFDKIKIDRSFV 756 Query: 333 TNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLN 392 ++ + AI++AI SL I +A GV T + WL G QG LF+ A+ Sbjct: 757 QDLAQRPDCLAIVRAIAGLGRSLNITTTAEGVETQAQLDWLREEGCNEVQGFLFSPARPA 816 Query: 393 GIPSI 397 G + Sbjct: 817 GEIAA 821 >UniRef50_C1DJP1 Cyclic di-GMP signal transduction protein n=1 Tax=Azotobacter vinelandii DJ RepID=C1DJP1_AZOVD Length = 1104 Score = 464 bits (1194), Expect = e-129, Method: Composition-based stats. Identities = 77/430 (17%), Positives = 149/430 (34%), Gaps = 43/430 (10%) Query: 10 HIRDDEPVKKI------EEMVSIANRRNMQSDVTGILLFNGS-HFFQLLEG-----PEEQ 57 H+ + + + +E + A R + LL+ F L +G + Sbjct: 673 HLAMHDGLTDLPNRNLIQERIEQAIVRARRGGRLLALLYLDLDRFKVLNDGYGHLFGDAV 732 Query: 58 VKMIYRAICQDPRHYNIVELL-----------------CDYAPARRFGKAGMELFDLR-- 98 +K + + R + V L D + G + Sbjct: 733 LKTASERLLKLVREGDTVARLGGDEFLILLADLEQPADADAVARKIVGSLDCPIVVQERK 792 Query: 99 LHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSD 158 +H + ++F + D+ + +R L +F + Sbjct: 793 IHLSGSIGVSLFPRDGETADELIDNADMAMYRAKELGRNTYQFFTRAM-SLETQRRVDLE 851 Query: 159 KELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGE 213 +L A + + + P V + I EA+++ + SP G Sbjct: 852 IKLRGAATAGQL--QLVYQPKVSLENGGISGCEALLRWHHPELGIVSPEHFIPIAEDSGL 909 Query: 214 IYTADLKSKALAFTMAHAL---ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPE 270 I A A A L +++N+ + + D V+++ ++ L Sbjct: 910 IVPIGDWVLRTACMQARAWMDAGLPPVCVAVNVSTRQFLQQ-DVVAWVTRTLRETGLPAA 968 Query: 271 QIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQE 330 ++ +E TES + ++ I LK G+ ++ID FG G++ L L RF+ D +KI Q Sbjct: 969 RLELELTESLIARDIEKVTATIDQLKDIGVKLSIDDFGTGYSSLNYLKRFRVDTLKIDQS 1028 Query: 331 LITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 + N+ + I+ A+I +L+ +V A GV T + +L S G + QG F++ Sbjct: 1029 FVRNMLTEMEDETIVLAVIALAHNLKFKVIAEGVETEQHSRFLCSNGCDEIQGHYFSEPV 1088 Query: 391 LNGIPSIAWP 400 Sbjct: 1089 TAEAFETMLR 1098 >UniRef50_B7GHW2 Multidomain signal transduction protein (GGDEF and EAL domains) n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GHW2_ANOFW Length = 765 Score = 463 bits (1193), Expect = e-129, Method: Composition-based stats. Identities = 72/416 (17%), Positives = 151/416 (36%), Gaps = 40/416 (9%) Query: 22 EMVSIANRRNMQSDVTGILLFNGSHFFQLLEG-----PEEQVKMIYRAICQDPRHYNI-- 74 ++ R Q ++ + F Q+ + +E + I R + + R + Sbjct: 352 KLEEELIRAKQQQHHFAVIFIDVDRFKQINDYFGHQIGDELIVQIGRLLKETIRPTDFIA 411 Query: 75 ----------------VELLCDYAPAR-RFGKAGMELFDLRLHERDDVLQAVFDKGTSKF 117 V+ L + F + + + L + V AV+ Sbjct: 412 RQGGDEFTIIFTPFKHVDELRRFVHRLVSFSQQPVAVQHLDIRISLSVGVAVYPYDGETV 471 Query: 118 QLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF--A 175 + + +R Q +F + L +++ N F Sbjct: 472 ETLMKHADIAMYRAKEQGKNQYQFFNGEMDRVVLQK-----TMIETALHEAIDNKQFTLF 526 Query: 176 FHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTM-- 228 + P D + ++ EA+++ SP+ + G+I A Sbjct: 527 YQPQFDVQTGELMGVEALIRWVHPELGTISPAMFIPIAEETGQIIAIGKWVIEEACRQIQ 586 Query: 229 -AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDE 287 + +S+N+ P + E + V + ++ L P+Q+ +E TE + Sbjct: 587 TWNEQHGRSLRMSVNISPKQFLKE-NFVEHIRAVLQQTQLPPDQLDLEITEGVAVFNEQY 645 Query: 288 FAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQA 347 + ++ LK G+ ++ID FG G++ L L +F +R+KI++ I + + A+++A Sbjct: 646 TIQKLQQLKQLGVHISIDDFGTGYSSLSYLRKFPINRLKIAKPFIDGITEEKEDVAVVKA 705 Query: 348 IIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEKK 403 II +L+++V A GV T ++ L S + QG + K + + E + Sbjct: 706 IIVLAKNLKLRVIAEGVETLQQLNILRSLQCDEIQGYVLGKPVPADQFAKLYIENQ 761 >UniRef50_Q1JVV8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JVV8_DESAC Length = 764 Score = 463 bits (1193), Expect = e-129, Method: Composition-based stats. Identities = 67/418 (16%), Positives = 137/418 (32%), Gaps = 40/418 (9%) Query: 20 IEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHYNI 74 ++ A RN + + +L F ++ E + + I Sbjct: 353 FRNRLNQAIARNHEGNHVVLLFIGLDRFTKINESLGREIGDNTLTQAAERFHNCLAENQI 412 Query: 75 VELL---------CDYAPARRFGKAGMELFDL----------RLHERDDVLQAVFDKGTS 115 + L D + K +L + ++ + + + + Sbjct: 413 LARLGGDEFAVIMEDCRHPQDAAKTAKKLLEQLIEPIHVQPNEIYLTASIGISSYPQDGE 472 Query: 116 KFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF- 174 + + R ++ +FE + + EL++ + Sbjct: 473 SPKTLMSHADIAMTRAKSEGKDRYQFFEREMTQTTKRV-----FELENDLRKAVARNELR 527 Query: 175 -AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTM 228 + P + S++I EA+V+ SP+ + G I + A Sbjct: 528 VYYQPQIQLDSQQITGMEALVRWQHPQRGLISPADFIPLAEETGLIVSIGEWVLRQACQQ 587 Query: 229 ---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 H L +++NL P+ V + +K + P + +E TES ++ Sbjct: 588 VAMWHDQGLPAVTVAVNLSPLQF-RHKALVRNVAKTLKETGINPACLELEVTESMIMDSI 646 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 D+ + L G +AID FG G++ L L F ++KI + I V A+ Sbjct: 647 DKSTATMIELTELGAGLAIDDFGTGYSSLSYLRYFPLTKLKIDKSFIERVTSDEHDAALA 706 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEKK 403 ++I SL ++V A G+ ++ +L QG LF++ + + Sbjct: 707 TSVIALAHSLNLKVVAEGIEHEDQVQFLVKRSCHQGQGFLFSRPVPAEDMEQLLRQIQ 764 >UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74FR9_GEOSL Length = 682 Score = 463 bits (1193), Expect = e-129, Method: Composition-based stats. Identities = 70/418 (16%), Positives = 142/418 (33%), Gaps = 39/418 (9%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHY 72 ++ +++S A R G+L + F + + + + + I R Sbjct: 258 DRVSQLLSQARRE---GGGFGVLHLDVDRFKGVNDSLGHACGDVLLSTVAGRIASSIRES 314 Query: 73 NIVELL---------------CDYAPARRF----GKAGMELFDLRLHERDDVLQAVFDKG 113 + V L D R + + + + A++ Sbjct: 315 DTVARLGSDEFVVILPGVGHEEDVVAVVRKIVEELNRPIVIQGNDIFCTASIGIAIYPTD 374 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 S + + + + + ++ + + L Sbjct: 375 GSSADILLKNADMAMHKAKEFGGDGYQFYSSELNHRAM-ERLTLETSLRRALERREFL-- 431 Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSK---ALA 225 + P++ S RI+ EA+++ + SP+ + G I Sbjct: 432 LHYQPLLGIGSGRIVGVEALLRWDSPELGMVSPARFIPLAEETGLIVPIGEWVLRSACEQ 491 Query: 226 FTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 H L + +S+N+ ++ + + + A L P + +E TES ++ R Sbjct: 492 LRALHELGYTELCVSVNVSARQFRHDG-FCAMVAAVLAAVGLDPRYLELELTESVIMERS 550 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 + ++ LK G+S+AID FG G++ L L F DR+KI + + V AI Sbjct: 551 ETAKGILRKLKQMGVSLAIDDFGTGYSSLSYLKHFPIDRLKIDRTFVKEVTVDQDNAAIA 610 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEKK 403 +AI+ L + V A GV T E+ +L + ++ QG A+ ++ Sbjct: 611 EAIVALAHVLNLDVVAEGVETAEQLAFLAALRCDVVQGYHIARPLPPRNLLEFLEARQ 668 >UniRef50_Q39WZ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=Q39WZ5_GEOMG Length = 739 Score = 463 bits (1193), Expect = e-129, Method: Composition-based stats. Identities = 68/417 (16%), Positives = 139/417 (33%), Gaps = 39/417 (9%) Query: 17 VKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRH 71 + ++++ ++ANR Q V L + F + + + ++ + I R Sbjct: 322 MDRLQQAKALANRYRYQVAV---LFLDLDRFKIINDTLGHPVGDHLLQQVAHRIAGCVRE 378 Query: 72 YNIVELL-------------------CDYAPARRFGKAGMELFDLRLHERDDVLQAVFDK 112 + V + + A + L + ++F Sbjct: 379 VDTVARIGGDEFTIILVNVDTVEDVKRMGQKILKTLAAPFNIDTHELFVTASIGISLFPS 438 Query: 113 GTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTIND 172 + + ++ + + + L + Sbjct: 439 DGDNLDQLVKKADIAMYCVKGEGRNNVQFYSPQMDANA-DKRLLLETSLRKALDNREFR- 496 Query: 173 HFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFT 227 + P VD +S+RI A EA+++ + SP + G I A Sbjct: 497 -VYYQPKVDIVSKRITAMEALIRWDHPILGLVSPGEFIPLAEETGLIIPIGEWVLRAACF 555 Query: 228 M---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISR 284 + +++NL + + + + + L + + +E TES ++ Sbjct: 556 QNCEWVRQGIPPMRVAVNLSGYQF-QQKNLLETIRGILDETGLTADLLELEITESVIMQN 614 Query: 285 FDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAI 344 D + L+ G+ ++ID FG G++ L L RF + +KI + + +V + AI Sbjct: 615 PDFAVSVLNQLRDLGVHISIDDFGIGYSSLAHLKRFSVNTLKIDKSFVRDVEINSADAAI 674 Query: 345 IQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPE 401 AII SL ++V A GV T + +L + QG LF+ + E Sbjct: 675 ATAIIAMGNSLNLKVIAEGVETEGQLSFLSDNKCDEVQGYLFSTPMPPEKVAEFMRE 731 >UniRef50_B5E7Y8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Geobacter RepID=B5E7Y8_GEOBB Length = 704 Score = 463 bits (1192), Expect = e-129, Method: Composition-based stats. Identities = 69/429 (16%), Positives = 151/429 (35%), Gaps = 55/429 (12%) Query: 17 VKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRH 71 ++++E+ + ANR + + +L + F + + + ++ + + + R Sbjct: 281 LQQLEQALVFANRYDR---MLAVLFLDLDRFKLVNDTLGHGVGDRLLQDVADRLLRCVRR 337 Query: 72 YNIVEL---------------------LCDYAPARRFGKAGMELF----------DLRLH 100 + + L D + K + + Sbjct: 338 GDCLARADEECPPSLVSRLGGDEFTIMLSDIEHFQDVAKIARRILEAVSVPYSLEGQEVF 397 Query: 101 ERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKE 160 + +++ + + ++ ++ L Sbjct: 398 VSTSIGISLYPFDATTASDLIRNADGAMYQAKEQGRNGYQIYDESMNAKAL-----ERII 452 Query: 161 LDSCALSPTINDHF--AFHPIVDPLSRRIIAFEAIVQKNE-----DSPSAIAVGQRKDGE 213 L+S + F + P V S R++ EA+V+ N P + G Sbjct: 453 LESQLHKALKEEEFIVYYQPQVSNQSGRVVGIEALVRWNSKELGLVEPGRFLPLAEEIGL 512 Query: 214 IYTADLKSKALAFTM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPE 270 + D A ++IN+ + + + + + +K + L P Sbjct: 513 VIQIDQWVMREACRQHKLWLDAGFPPVTLAINISGQQFMK-NELLETVTSVLKESGLDPG 571 Query: 271 QIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQE 330 + +E TE +++ + + +++LK G+ +AID FG GF+ L L RF D +KI + Sbjct: 572 LLELELTEGVLMAHTERTVKTLQALKGMGVRLAIDDFGTGFSSLSYLKRFPLDVLKIDRT 631 Query: 331 LITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 I ++ AI A I+ +++++V A GV T + +L G +M+QG LF+K Sbjct: 632 FINDITTDPDDAAITLATIEMAHTMKLKVIAEGVETKPQLDFLTKNGCDMYQGYLFSKPV 691 Query: 391 LNGIPSIAW 399 + + Sbjct: 692 PSTELPRLF 700 >UniRef50_C5V2W0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V2W0_9PROT Length = 1275 Score = 463 bits (1192), Expect = e-129, Method: Composition-based stats. Identities = 74/434 (17%), Positives = 148/434 (34%), Gaps = 44/434 (10%) Query: 10 HIRDDEPVKKIE--EMVSIANRRNMQSDV-----TGILLFNGSHFFQLLE-----GPEEQ 57 H++ + + + ++ ++ G++ N HF + + G ++ Sbjct: 710 HLKHYDALTDLPNRALLEDRIESSITHARQYERFIGVIFLNLDHFHTVNDMLSHAGGDQV 769 Query: 58 VKMIYRAICQDPRHYN---------IVELLCDYAPARRFGK----------AGMELFDLR 98 + + + V L D + + + + D Sbjct: 770 LIATAKRLMDAAPAQASISRLSADTFVIALPDLNTSEEINRTAELIAQKIYQPLTVADQS 829 Query: 99 LHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLA-TEQSTYFEIPAEDSWLFIADGS 157 + + +V+ + ++ + Sbjct: 830 VQLSARMGISVYPIDGNDATTLMKHADAALADAKQCGVRNSFRFYSSSMNEHA-HKLLTM 888 Query: 158 DKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDG 212 EL + + + P VD ++ +II EA+++ N SP + G Sbjct: 889 GAELRNAISQNRLV--LHYQPQVDIITGQIIGAEALIRINHPERGIISPGEFISVAEETG 946 Query: 213 EIYTADLKSKALAFTMAHALELG---DKMISINLLPMTLVNEPDAVSFLLNEIKANALVP 269 I A L + I+INL P+ L ++ D + + + L Sbjct: 947 LIIPMGTWVIREACRQMQQWHLDKNIELTIAINLSPLQL-HQSDLPEIVSLALHDSGLNA 1005 Query: 270 EQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQ 329 + +EFTES ++ E + KA G+ ++ID FG G++ L L +F D++KI Q Sbjct: 1006 RYLELEFTESAIMKNVRETVAIMNKFKAMGLHLSIDDFGTGYSSLSYLKQFPVDKLKIDQ 1065 Query: 330 ELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 ++N+ + AI+QAII +L + A GV T + +L S + QG L++ Sbjct: 1066 SFVSNITQDPNDAAIVQAIIALGRTLGMTTIAEGVETEAQLGYLRSVNCKEMQGYLYSAP 1125 Query: 390 KLNGIPSIAWPEKK 403 + K Sbjct: 1126 LPAEEFAALLVRGK 1139 >UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YY70_9NEIS Length = 1054 Score = 463 bits (1192), Expect = e-129, Method: Composition-based stats. Identities = 76/428 (17%), Positives = 160/428 (37%), Gaps = 42/428 (9%) Query: 10 HIRDDEPVKKI-------EEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQ 57 H+ + + + + + + Q + +L + HF + + +E Sbjct: 623 HMAEHDFLTDLPNRALIHDRLAQAIRAAARQKNRLAVLFLDLDHFKNINDTLGHAHGDEL 682 Query: 58 VKMIYRAICQDPRHYN------------IVELLCDYAPARRFGKA-------GMELFDLR 98 +K + + + R + IV L A A + + ++ Sbjct: 683 LKQVAQRLQHTVRGSDTVGRNGGDEFVLIVPELASPAEAAQLAQRLLDDLRRPFQIDGQA 742 Query: 99 LHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSD 158 L + ++F S+ Q L + + +F ++ + + Sbjct: 743 LAISTSIGISLFPDNGSELQELLVSADLAMYHAKAQGRNRYQFFTPEL-NAQVAERLTLE 801 Query: 159 KELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGE 213 L + + + P +RR++ EA+++ SP+ + G Sbjct: 802 NHLRQALERQQL--YLVYQPQFAIDNRRLVGCEALLRWQHPEQGLISPARFIPLAEETGL 859 Query: 214 IYTADLKSKALAFTMAHAL--ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQ 271 I A A A +++N+ L +PD ++ + + + L Sbjct: 860 IVEIGRWVLDEACRQAAAWLAAGTPLRVAVNVSARQLG-QPDLLAEVEAALARHRLPSCW 918 Query: 272 IIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQEL 331 + +E TES ++ ++ +++ K GI +A+D FG G++ L L RF PD IKI + Sbjct: 919 LELEVTESTLMEDAEQAVRHLQAFKERGIHLAVDDFGTGYSSLTYLKRFSPDLIKIDRAF 978 Query: 332 ITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 + N+ + AI+ AI++ +L +Q A GV + E+ +L AG ++ QG L + + Sbjct: 979 VMNLPDNRDDAAIVSAIVQLAEALGMQTLAEGVESEEQLDFLAQAGCDVVQGYLTGRPQS 1038 Query: 392 NGIPSIAW 399 G + Sbjct: 1039 AGELTAQL 1046 >UniRef50_A2SDI4 Signal transduction protein n=2 Tax=Proteobacteria RepID=A2SDI4_METPP Length = 1006 Score = 463 bits (1192), Expect = e-129, Method: Composition-based stats. Identities = 78/437 (17%), Positives = 160/437 (36%), Gaps = 49/437 (11%) Query: 9 SHIRDDEPVKKI------EEMVSIANRRNMQSDVT-GILLFNGSHFFQLLEGP-----EE 56 S++ + + + ++ V A + + ++ + HF + + +E Sbjct: 570 SYLAHHDGLTGLPNRVLFQDRVHQACQSGRRHGRRFAVIFMDLDHFKHVNDSLGHAVGDE 629 Query: 57 QVKMIYRAICQDPRHYN---------IVELLCDYAPAR------------RFGKAGMELF 95 +K + + + R + V LL D R L Sbjct: 630 LLKAVAQRLTGALRASDTICRLGGDEFVVLLSDLDDVEVDGVAEVAKKILRQVAQPCVLG 689 Query: 96 DLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIAD 155 ++ + A+F +R+ + +F +D+ Sbjct: 690 GTEVNVGASLGIALFPGDGEDPDTLMKRADAAMYRSKREGRNRYHFFSKAVDDAA----- 744 Query: 156 GSDKELDSCALSPTINDHF--AFHPIVDPLSRRIIAFEAIVQKNE-----DSPSAIAVGQ 208 + +L++ F + P+V +R +A EA+++ + SP+ Sbjct: 745 SARLQLEADMRRALAAGQFIVHYQPVVHGRTRDAVAVEALLRWDRAGQGLQSPAVFIPVA 804 Query: 209 RKDGEIYTADLKSKALAFTMAHALE---LGDKMISINLLPMTLVNEPDAVSFLLNEIKAN 265 + G I A A LG +++N+ P+ L + D V + + + A Sbjct: 805 EESGLIVPMGHWVLRQACEQLRAWSGTALGGISVAVNVSPVQLA-QADFVDTVADVLHAT 863 Query: 266 ALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRI 325 + ++ E TES ++ + E ++ LK G+ +AID FG G++ L L RF D + Sbjct: 864 GVDGSRLEFEITESTLMQDPEATLEMLRRLKGLGVRIAIDDFGTGYSSLGHLKRFPVDTL 923 Query: 326 KISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDL 385 KI + ++ + +++AI+ SL + V A GV T + L + FQG L Sbjct: 924 KIDHTFVRDLEADADDRELVRAILAMARSLRLHVVAEGVETEAQAAILAAMECPAFQGYL 983 Query: 386 FAKAKLNGIPSIAWPEK 402 FA+ + + ++ Sbjct: 984 FARPAGAAVTAAWLQDR 1000 >UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q221U3_RHOFD Length = 1037 Score = 462 bits (1191), Expect = e-129, Method: Composition-based stats. Identities = 74/430 (17%), Positives = 141/430 (32%), Gaps = 43/430 (10%) Query: 2 LTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EE 56 LT L RS + D + +S+A R D I+ + HF + + ++ Sbjct: 616 LTGLPNRSQLHD-----RFRYALSLAQRH---GDQLAIMFLDLDHFKNINDTLGHSVGDQ 667 Query: 57 QVKMIYRAICQDPRHYNIV----------------ELLCDYAPARRFGK--AGMELFDLR 98 + + R + R + + E + ++ Sbjct: 668 LLVDVSRRLKAALREEDSLSRLGGDEFILLLPGTDEAQASQVATKLLAAVAQPCQIEQNE 727 Query: 99 LHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSD 158 L + A++ F+ + +R + +F + Sbjct: 728 LVSTVSIGIALYPNDGQDFETLSKNADAAMYRVKQASRNDFRFFTQEMQTHSARTLQLV- 786 Query: 159 KELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGE 213 L F P V I+ EA+++ SP+ G+ Sbjct: 787 NALRHALPRHE--FELHFQPQVALQDGHIVGAEALLRWRHPELGMISPAEFIPIAEDSGQ 844 Query: 214 IYTADLKSKA---LAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPE 270 I L +I++NL + P+ ++ + + AL PE Sbjct: 845 ILAIGEWVLRTAVRQLKQWLDAGLRPMVIAVNLSAVQF-RHPNLMALVTRILDEAALPPE 903 Query: 271 QIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQE 330 + +E TE+ + + L GI ++ID FG G++ L L +F+ +++KI Q Sbjct: 904 FLELELTEAAAMDDPPAAIAIMNKLDEHGIRMSIDDFGTGYSSLSYLKKFKVNKLKIDQS 963 Query: 331 LITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 + ++ +AI+ AII +SL + A GV T + +L G + QG +K Sbjct: 964 FVRDISDDPDDKAIVTAIINLASSLGMHTIAEGVETASQLAFLRLQGCDEVQGYYVSKPL 1023 Query: 391 LNGIPSIAWP 400 Sbjct: 1024 PKDQFEAFVR 1033 >UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IA0_DECAR Length = 925 Score = 462 bits (1191), Expect = e-129, Method: Composition-based stats. Identities = 72/432 (16%), Positives = 144/432 (33%), Gaps = 47/432 (10%) Query: 10 HIRDDEPVK------KIEEMVSIANRRNMQSDV-TGILLFNGSHFFQLLEGP-----EEQ 57 H+ + + + E ++ A ++ + ++L + F + + +E Sbjct: 471 HLAHHDTLTNLANRFSLHEKLAQALAFCKRNRMQLALMLIDLDRFKTINDTLGHQAGDEL 530 Query: 58 VKMIYRAICQDPRHYNIVELL-------------------CDYAPARRFGKAGMELFDLR 98 + + + + R +IV L R A + Sbjct: 531 LVQVAKRLSHAVRESDIVARLGGDEFVIALPGIGSPADAAHLADDITREISAPYLIKGQE 590 Query: 99 LHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSD 158 L + V+ S+ + + + +F IA Sbjct: 591 LRTSPSIGICVYPGDGSEIGDLLKNADVAMYHAKANGRGNYQFFTEDMN-----IATTER 645 Query: 159 KELDSCALSPTINDHF--AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKD 211 L+S F + P +D S I+ EA+++ SP+ + Sbjct: 646 MCLESDLRLAITRREFLLHYQPQLDLRSGTIVGVEALIRWQHPTRGLVSPADFIPIAEES 705 Query: 212 GEIYTADLKSKALAFTM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALV 268 G I A + +SINL +++ + + + AN L Sbjct: 706 GMIAAIGDWVLEEACRQLKVWQNRGITHLRMSINLSAGQFLDKT-LPARIHELLAANDLS 764 Query: 269 PEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKIS 328 +++ +E TES ++ DE +K+L ++G++++ID FG G++ L L +KI Sbjct: 765 ADRLDLEVTESMSMASPDESISVMKTLSSSGLTLSIDDFGTGYSSLAYLKLLPIHTLKID 824 Query: 329 QELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 + + ++ I + L ++V A GV T + +L S G E QG L +K Sbjct: 825 RSFVKDIESDPNDADICDVTVLLAHKLGLEVVAEGVETEAQLKFLLSIGCEKVQGYLISK 884 Query: 389 AKLNGIPSIAWP 400 Sbjct: 885 PLPADQAERFIR 896 >UniRef50_C0ZBT6 Probable signaling protein YkoW n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT6_BREBN Length = 816 Score = 462 bits (1191), Expect = e-129, Method: Composition-based stats. Identities = 71/429 (16%), Positives = 151/429 (35%), Gaps = 39/429 (9%) Query: 5 LIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVT-GILLFNGSHFFQLLEGP-----EEQV 58 L Y + D +K +++ + ++ Q + +++ + F + + + + Sbjct: 381 LAYHDELTDLPNRRKFNQVLHQSIEKSSQDSSSFAVMVIDIDRFKMINDSLGHSYGDIFL 440 Query: 59 KMIYRAICQDPR--HYNIVE-------LLCDYAPARR-----------FGKAGMELFDLR 98 + + I + + H I +LC+ R K L D Sbjct: 441 QGVSDRISKSAKGYHATIARMGGDEFTILCETGADGREAASLADKIIEALKQPFTLKDSE 500 Query: 99 LHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSD 158 + + A+F + + ++ D+ L + Sbjct: 501 FYISASIGTAIFPDHGTDAVALLKKADTAMYEVKKQGKNGHLFYTTD-FDAQLLENIEIE 559 Query: 159 KELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGE 213 ++L + + P S R+I EA+V+ N SP + G Sbjct: 560 RDLRKAIERKELV--VYYQPQFHSESNRMIGVEALVRWNHPTKGMLSPGVFIPIAEETGL 617 Query: 214 IYTADLKSKALAFTM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPE 270 IY A H +S+NL ++ + V ++ N ++ L P Sbjct: 618 IYEIGTWVLREACRQMKQWHDKGGPLIPVSVNLSSHQF-HQRNLVQYIKNILEETKLAPH 676 Query: 271 QIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQE 330 + +E TES ++ + L G +++D FG G++ L L +F ++KI + Sbjct: 677 FLELEITESMMM-DPAVSISILHELNKIGTRISLDDFGTGYSSLSYLKKFPIHKLKIDRS 735 Query: 331 LITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 IT++ ++ +AI+ II L++ V A G+ T ++ L + QG +++ Sbjct: 736 FITDLSRNENDKAIVATIISMAKHLKLDVIAEGIETKDQLDILTENHCKEIQGYYYSRPL 795 Query: 391 LNGIPSIAW 399 ++ Sbjct: 796 SANEVEQSF 804 >UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X9G9_METSD Length = 984 Score = 462 bits (1190), Expect = e-129, Method: Composition-based stats. Identities = 66/435 (15%), Positives = 141/435 (32%), Gaps = 37/435 (8%) Query: 2 LTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQS-DVTGILLFNGSHFFQLLEGP-----E 55 L L+ R + + + E++ A + + + +L + F + + + Sbjct: 549 LNELVNRDPLTGLPNRRLMHELLDHAIKYAEREQNEIALLFVDLDRFKAINDTLGHQMGD 608 Query: 56 EQVKMIYRAICQDPRHYNIVELLC--------DYAPARRFG-----------KAGMELFD 96 + + + + I R + V L D R + + Sbjct: 609 KLLFEVSQRIRAAVRDSDAVARLGGDEFIVMMDVLREREDAAKVAKKIISSLQNEFLIDG 668 Query: 97 LRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADG 156 L V +V+ + + ++ ++ + + Sbjct: 669 RELFISASVGISVYPDDSLDVDGLIKAADIAMYQVKNKGKNNHCFYSADLSQNAV-ERFT 727 Query: 157 SDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKD 211 + +L + V + RII E++++ SP+ + Sbjct: 728 LENQLRRALAR--DQFEVYYQAQVSLETGRIIGAESLIRWIHPELGVVSPAKFIPLAEET 785 Query: 212 GEIYTADLKSKAL---AFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALV 268 G I H +S+N+ + + + + + Sbjct: 786 GLIIPIGEWVLRQSAMQVKEWHDQGFDIDWVSVNVSGVQIQR-SNFADTVYGILVETDCE 844 Query: 269 PEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKIS 328 + +E TES V+ + + +K G+ +AID FG G++ L L R D+IKI Sbjct: 845 SHLLELEITESTVMHNTEYVIDVFDRIKHLGVRLAIDDFGTGYSSLSHLKRLPLDKIKID 904 Query: 329 QELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 Q + ++ + AI AI SL V A GV T ++ +L+ G + QG L+++ Sbjct: 905 QSFVRDLPNNSDDAAIATAINAMAQSLGFTVIAEGVETRQQASFLKKIGCQQGQGYLYSR 964 Query: 389 AKLNGIPSIAWPEKK 403 + ++ Sbjct: 965 PVTASEFTALLRAEQ 979 >UniRef50_D1AZY7 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1AZY7_SULD5 Length = 586 Score = 462 bits (1190), Expect = e-128, Method: Composition-based stats. Identities = 72/436 (16%), Positives = 148/436 (33%), Gaps = 44/436 (10%) Query: 4 TLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTG-ILLFNGSHFFQLLEG-----PEEQ 57 TL + + + + + ++ A ++ + G +L+ + +F L + +E Sbjct: 155 TLAFFDPLTHLANRQLLHDRMAQALAKSQRHHKVGALLMIDLDNFKALNDTKGHHIGDEL 214 Query: 58 VKMIYRAICQDPRHYN---------IVELLCDYAPARR---------------FGKAGME 93 + + + I R + V LL A E Sbjct: 215 LIQVAQRIQTIVREGDTLARISGDEFVVLLEGLAHEESKAAQEAEKFATRVKYLLNEPYE 274 Query: 94 LFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFI 153 L + A+F+ + + ++ + +++ +++ + Sbjct: 275 LLGYEHTCSSSIGIALFNGQPKSKETLLKQADIAMYQAKEKGRNRICFYDPLMQEN-IEH 333 Query: 154 ADGSDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQ 208 + EL + + P V+ +I+ EA+++ N P+ Sbjct: 334 KTTMEHELRMALSKEELI--LFYQPQVNLE-GKIVGVEALLRWNHPQKGLIPPNTFIPLA 390 Query: 209 RKDGEIYTADLKSKALAFTMAHAL----ELGDKMISINLLPMTLVNEPDAVSFLLNEIKA 264 + G I A +SIN+ E + N I Sbjct: 391 EETGLIIPVGSWVLHRACQQLSEWKKDFPHQPLHLSINVSAKQF-QEASFYETVANAIAL 449 Query: 265 NALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDR 324 + I +E TES ++ E I++L+ G+ ++D FG G++ L L R D Sbjct: 450 SGSDAGSIKLELTESLILDSIHETIAKIEALRLLGVGFSLDDFGTGYSSLSYLKRLPLDE 509 Query: 325 IKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGD 384 +KI Q + ++ I++ II+ + ++ V A GV E++ +L G +FQG Sbjct: 510 LKIDQSFVRDIGHDNNDAMIVKTIIEMAHNFDLDVIAEGVEDKEQFNFLMENGCGLFQGY 569 Query: 385 LFAKAKLNGIPSIAWP 400 LF K + Sbjct: 570 LFGKPMPPEELERLFL 585 >UniRef50_A6WKV6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Shewanella RepID=A6WKV6_SHEB8 Length = 921 Score = 462 bits (1190), Expect = e-128, Method: Composition-based stats. Identities = 67/434 (15%), Positives = 151/434 (34%), Gaps = 50/434 (11%) Query: 9 SHIRDDEPVKKIEEMVS----------IANRRNMQSDVTGILLFNGSHFFQLLEG----- 53 +H+ +P+ + + A R N+Q ++ + F + + Sbjct: 494 THLAYFDPLTHLPNRMKFMMQLKQEVRQAKRLNLQL---ATVMIDVDLFKHINDSFGHSI 550 Query: 54 PEEQVKMIYRAICQDPRHYNIVELL--CDYAP----------ARRFGKAGMELFDL---- 97 +E + + + + +++ + ++ A ++F+ Sbjct: 551 GDEMLVELAKRLRSQVGDQDVLSRIGGDEFVALISGIDNNEDATVAINQLRQVFEQPFIV 610 Query: 98 ----RLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFI 153 L + +++ + + +R ++ F Sbjct: 611 STGDHLRLTASMGVSLYPNDGTDADTLLRNADAAMYRAKNDGRNNYAFYTESLTQQS-FE 669 Query: 154 ADGSDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQ 208 L + + + P +D +SR+ + FEA+++ ++ SP+ Sbjct: 670 HLKLQSALYGAIEQNAL--YLMYQPKLDLVSRKTVGFEALLRWHDPQLGLISPAVFIPVA 727 Query: 209 RKDGEIYTADLKSKALAFTM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKAN 265 K G I+ L A I++N+ L V + + Sbjct: 728 EKIGLIHEIGLWVLETACRQGMRWLREGKHFGRIAVNVAGQQLQR-SSFVDDVKRVLAET 786 Query: 266 ALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRI 325 L + + +E TES ++ D +K L GI +++D FG G++ L L + ++ Sbjct: 787 GLPAKHLELEVTESVMMQNPDLAIRDLKRLGDLGIELSVDDFGTGYSSLNYLKKLPIHKL 846 Query: 326 KISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDL 385 KI Q + ++ AI +A+I +L++ + A GV T E+ +L+ + QG L Sbjct: 847 KIDQSFVRDIPFDTNNTAIAKAVIALGHALKLDIIAEGVETKEQADFLQQNQCDQAQGYL 906 Query: 386 FAKAKLNGIPSIAW 399 F++ +L Sbjct: 907 FSRPQLPEDLDAFL 920 >UniRef50_B3E9L8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter lovleyi SZ RepID=B3E9L8_GEOLS Length = 631 Score = 462 bits (1190), Expect = e-128, Method: Composition-based stats. Identities = 68/417 (16%), Positives = 146/417 (35%), Gaps = 40/417 (9%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHY 72 ++ ++++ A R N + IL + F ++ + ++ ++++ + R Sbjct: 209 DRLAQLLTRAGRYNE---MVAILFIDLDRFKEVNDTLGHGTGDQLLQVVSERLTACLRSC 265 Query: 73 NIVELL--------------CDY---APARRFGKA--GMELFDLRLHERDDVLQAVFDKG 113 + V L D A+ ++L + + +++ Sbjct: 266 DTVARLGGDEFVVLLPGITERDCVGDIAAKLLQSLCKPVQLDAREVFTSGSIGISLWPID 325 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 + + + ++ + + S +L + H Sbjct: 326 GDSVSTLFKNADTAMYHAKEQGRNTYRFYTPQMHATSMEQLTLS-NDLRYALERGEL--H 382 Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTM 228 + P V + +I EA+++ P G I A Sbjct: 383 LCYQPQVSFETGGLIGVEALLRWIHPKLGMIPPDRFIPLAEDTGLIVPIGTWVLHEACRQ 442 Query: 229 ---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 A L +++N+ E D + ++ L P + +E TE +I Sbjct: 443 AMMWVAQGLPSLRVAVNISAKQF-RESDFSDTVKAVLQTTGLAPNLLELELTEGMLIENV 501 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNV-HKSGPRQAI 344 + ++SLK G+++AID FG G++ L L F DR+KI + + + KSG AI Sbjct: 502 TQTKLTLQSLKDMGVTLAIDDFGTGYSSLSYLKHFPLDRLKIDKSFVKEIAEKSGDAAAI 561 Query: 345 IQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPE 401 ++A++ SL++ V A GV ++ +L + + QG F++ + Sbjct: 562 VEAVVALGHSLKLTVIAEGVEQQDQVDFLHNRKCDELQGYFFSRPLTPQALEELLRK 618 >UniRef50_C1DD31 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DD31_LARHH Length = 910 Score = 462 bits (1190), Expect = e-128, Method: Composition-based stats. Identities = 67/395 (16%), Positives = 132/395 (33%), Gaps = 38/395 (9%) Query: 43 NGSHFFQLLEGP-----EEQVKMIYRAICQDPRHYN---------IVELLCDYAPARRFG 88 + HF + + ++ ++ + + + R + V LL D +R Sbjct: 510 DIDHFKHINDTLGHSTGDQLLQSVAKRLQATVREGDTVSRQGGDEFVVLLPDANASRAAS 569 Query: 89 KA---------GMELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQS 139 A + + + + A+ + F + +R Sbjct: 570 VAQEILRRLGFVCRIGEHDISVSVSIGIAMAPDDGTDFATLSKCAEIAMYRAKQEGRNTL 629 Query: 140 TYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED 199 +F ++ L L + + P VD + + EA+++ Sbjct: 630 RFFFPEMQERTL-RHVQLTGALRGAVERGEM--QLHYQPQVDLQTGELSGVEALLRWTHP 686 Query: 200 -----SPSAIAVGQRKDGEIYTADLKSKALAFTMAHAL---ELGDKMISINLLPMTLVNE 251 SP + G I A L ++++NL + N Sbjct: 687 LFGAVSPGEFIPLAEESGLIIPIGDWVLRTAARQLADWLRDGLPPMVMAVNLSVLQF-NL 745 Query: 252 PDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGF 311 P + + + + P VE TES ++ + I L + G+ V++D FG G+ Sbjct: 746 PGLAQQIASILSEAGVPPALFEVELTESMAMTEPEAAIATIDELHSVGVQVSLDDFGTGY 805 Query: 312 AGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWM 371 + L L RF+ DR+KI + + +AI+ AI+ SL + A GV T + Sbjct: 806 SSLAYLKRFRLDRLKIDGSFVRDADSDPEDRAIVDAIVGMAESLGLATVAEGVETSGQLE 865 Query: 372 WLESAGIEMFQGDLFAKAKLNGIPSIA---WPEKK 403 + + G + QG ++ W ++K Sbjct: 866 VIRALGGDAVQGYWISRPLPAAGLVAWLEGWQQRK 900 >UniRef50_Q20XI9 Diguanylate cyclase/phosphodiesterase n=11 Tax=Bradyrhizobiaceae RepID=Q20XI9_RHOPB Length = 915 Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats. Identities = 73/420 (17%), Positives = 145/420 (34%), Gaps = 40/420 (9%) Query: 9 SHIRDDEPVKKIE------EMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQ 57 +++ + + + E + R + +L + F + + + Sbjct: 476 AYLAHYDELTSLPNRTSFRERIEDEFERVARGGTLALLYIDIDEFKAINDSLGHPVGDAL 535 Query: 58 VKMIYRAICQDPRHYNIV-------------------ELLCDYAPARRFGKAGMELFDLR 98 +K++ + R + V E+ A +A E + Sbjct: 536 LKIVAARLKACLRETDFVARLGGDEFAILQTAPRDVQEVTELVARLFETIRAPCECLGHQ 595 Query: 99 LHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSD 158 + + A+ + + L ++ +FE E S + Sbjct: 596 ISTDASIGIALAPPHGTDTDQLIKNADLAMYQAKADGRRTCRFFEPRMEASA-KERRTLE 654 Query: 159 KELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGE 213 EL + PIV+ + +I EA+++ SP+ G Sbjct: 655 LELRKAI--ADCAFEIYYQPIVELRNGDVIGCEALLRWRHPQRGMISPAKFIPVAEATGL 712 Query: 214 IYTADLKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQII 273 I A A + +++N+ P+ + + + A+ L ++ Sbjct: 713 INELGEWVLRTACAEAANWP-AEMSVAVNVSPVQFKSRT-LPLKVAAALAASGLPASRLE 770 Query: 274 VEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELIT 333 +E TE+ +I + + LK G+ +A+D FG G++ L L RF D+IKI + I Sbjct: 771 LEITEAVLIDDDETALSVLHELKTLGVRIALDDFGTGYSSLSYLQRFPFDKIKIDRCFID 830 Query: 334 NVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNG 393 + + AI+QA++ T+ + +A GV T E+ L G QG LF+ A Sbjct: 831 GIARPDGASAIVQAVVNIATARHMTTTAEGVETAEQRDLLRGLGCTHMQGYLFSPAIAPD 890 >UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=C7QU83_CYAP0 Length = 1514 Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats. Identities = 62/415 (14%), Positives = 148/415 (35%), Gaps = 39/415 (9%) Query: 19 KIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEG-----PEEQVKMIYRAICQDPRHYN 73 ++++ + A R+ ++ + F + + + ++ + + + Q R + Sbjct: 1100 RLDQSIQQATRK---RTKLAVVFIDLDRFKHINDSMGHAAGDALLQQLAQRLRQVLRSSD 1156 Query: 74 ---------IVELLCDYAPARRFG----------KAGMELFDLRLHERDDVLQAVFDKGT 114 V +L D + + L +H + ++F Sbjct: 1157 TVARISGDEFVAVLEDIEDIQHASMVVAKLMTVFEEPFPLEGQIIHMTSSMGLSLFPDDG 1216 Query: 115 SKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF 174 + + +R ++ + F + L + Sbjct: 1217 MDTAILLRNADSAMYRAKEEGRNTYCFYAEEMTSAA-FEYVLFENALRGALKRNE--FYL 1273 Query: 175 AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTMA 229 + P +D S R + E +++ + SP+ + G I A A Sbjct: 1274 VYQPQIDLSSHRWVGMEVLLRWHHPELGIVSPAQFIPIAEQSGLIQEIGTWVLYRACCQA 1333 Query: 230 HAL---ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFD 286 + I++N+ + + + V + + + ++ L + +E TE V+ + + Sbjct: 1334 KTWLDQGIDFGHIAVNVAAPQI-QQNNFVHLVQDALDSSGLPSPHLELELTEGLVMHQTE 1392 Query: 287 EFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQ 346 + + ++ L+ GI +AID FG G++ L L R +++KI + + ++ AI + Sbjct: 1393 DRIKQLEVLQDMGIYLAIDDFGTGYSSLSYLKRLPINKLKIDKSFVRDIPHDTNDMAISE 1452 Query: 347 AIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPE 401 A+I +L +++ A GV + +L G QG L++K + + E Sbjct: 1453 AVIALGKALNLRIIAEGVEQEIQATFLREKGCHEAQGYLYSKPLPPEEITQLFAE 1507 >UniRef50_B9M6C9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9M6C9_GEOSF Length = 845 Score = 461 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 60/424 (14%), Positives = 135/424 (31%), Gaps = 43/424 (10%) Query: 6 IYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKM 60 I + + +S +R N + ++ + F + + ++ +++ Sbjct: 426 ILTGLANRMLFMDHLALSISQGHRYNE---IQAVMFLDLDRFKSINDSLGHAAGDKLLQL 482 Query: 61 IYRAICQDPRHYNIVE---------LLCDYAPARRFG----------KAGMELFDLRLHE 101 I + + R + V L+ A + +LH Sbjct: 483 ISGRLKECVRETDTVARIGGDEYNILITQMAHPEDATAIANKILSSMNKPFAIDGHQLHV 542 Query: 102 RDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKEL 161 + +++ + + + + ++ L ++ Sbjct: 543 TISIGISLYPTDGEDAETLLKNADIALYHAKEQGRNNYQFYNP-----ALNTRTLERVKM 597 Query: 162 DSCALSPTINDHFA--FHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEI 214 ++ + P V + ++ EA+V SP + G I Sbjct: 598 ENRLRQALERHELVVLYQPQVAMDTGQVTGAEALVYWLHPELGLLSPGHFIPMAEEIGFI 657 Query: 215 YTADLKSKALAFTM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQ 271 D A +++N+ PD V + + A L P Sbjct: 658 TDIDEWVLETACAQNKAWQDEGYRSFNVTVNMSSKQF-RRPDLVDQVRRVLNATGLPPRF 716 Query: 272 IIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQEL 331 + +E TE + + ++ +L + AID FG G++ L L + ++KI + Sbjct: 717 LELEITEGTAMKDIEYTIPSLNTLTGMEVGFAIDDFGTGYSSLSCLKKLPIRKLKIDKSF 776 Query: 332 ITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 I V+ +AI+ II +L+++V A GV ++ +L + QG L+++ Sbjct: 777 IFGVNTDPNDKAIVATIIAMAHNLKLEVIAEGVEDADQLEFLHQNHCDQMQGFLYSRPIP 836 Query: 392 NGIP 395 Sbjct: 837 AEDF 840 >UniRef50_B9JLU1 Sensory box/GGDEF family protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JLU1_AGRRK Length = 766 Score = 461 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 77/399 (19%), Positives = 133/399 (33%), Gaps = 35/399 (8%) Query: 9 SHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGPEEQVKMIYRAICQD 68 H D+ +K + +S G G F +LE + ++ + Sbjct: 380 GHSVGDQLLKIVASRISELTSDQGSLARIG-----GDEFVIILEQMD--LESCLDRL--- 429 Query: 69 PRHYNIVELLCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQF 128 + R + L D+ L + A + S + Sbjct: 430 -------------SAIREAVTRPIVLNDIELRVTCSIGVASYPSHGSTAGELLASADMAM 476 Query: 129 FRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPIVDPLSRRII 188 +R L + F + + EL L + P VD + RI+ Sbjct: 477 YRAKELGRDGIALFTSAM-TAIVRKKLSRTDELRQALLRDEFV--LHYQPQVDVRTGRIV 533 Query: 189 AFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTM---AHALELGDKMIS 240 A EA+++ N S P + I A IS Sbjct: 534 AAEALIRWNHSSEGLVYPGDFIALAEETSLIVPIGEWVLKTACRQAKAWQDQGREPIRIS 593 Query: 241 INLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGI 300 +N+ E + + + + L P + +E TES ++ ++ L+ G+ Sbjct: 594 VNVSARQF-QEKRLIETVATALSESGLDPIWLELEITESLIMKDLAGSIARMQELETLGV 652 Query: 301 SVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVS 360 +A+D FG G++ L L RF R+KI + I ++ AI AII L ++V Sbjct: 653 KLAVDDFGTGYSSLSALKRFPLSRLKIDRSFIADIPHDADDMAITAAIISLAQKLGLEVI 712 Query: 361 AMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAW 399 A GV T E+ +L +G QG LF++ + Sbjct: 713 AEGVETEEQARFLVESGCNEIQGYLFSRPVEEAQFNRML 751 >UniRef50_B7KEB0 Diguanylate cyclase/phosphodiesterase n=6 Tax=Bacteria RepID=B7KEB0_CYAP7 Length = 684 Score = 461 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 64/416 (15%), Positives = 146/416 (35%), Gaps = 43/416 (10%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHY 72 +K+ ++ A + ++ + F + + +E + + + + R Sbjct: 272 EKLSTALAKAYLE---ETLIAVMFIDLDGFKNINDTLGHTLGDELLGSFAQRLRHNLRSS 328 Query: 73 NIV-----------------ELLCDYAPARRFG--KAGMELFDLRLHERDDVLQAVFDKG 113 +I+ E + R F + ++ + L+ + + A++ + Sbjct: 329 DILARWGGDEFTILIPQIKNEEEIEICAKRVFSILQQPFQVGNHLLYLKASIGVAIYPRD 388 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 + + +RT + + + E+++ D Sbjct: 389 GQDAETIIKNADAALYRTKEMGRNHYQIYHP-----LITSKTSERLEMENLLHQALEKDQ 443 Query: 174 F--AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAF 226 F + P ++ ++ I EA+++ SP+ + G I + A Sbjct: 444 FLLHYQPQINIKNQAICGMEALIRWEHPTLGLVSPAKFIPIAEESGLIISIGEWVLRQAC 503 Query: 227 TM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVIS 283 L +++NL +P+ V+ + + L P+ + +E TE+ ++ Sbjct: 504 EQNRLWQKKGLPPVRVAVNLSAQQF-QQPNFVNIVTKILAETNLEPQFLELEITETTIMK 562 Query: 284 RFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQA 343 + + + LK G+ +++D FG G++ L L + + IKI Q I ++ A Sbjct: 563 NLEFSCQIVHDLKHMGVHISMDDFGTGYSSLGYLKQIPFNTIKIDQSFIKDLQDKPQDLA 622 Query: 344 IIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAW 399 II A++ ++V A GV T + L E QG F+K + Sbjct: 623 IISAVLAIGRGFNVRVIAEGVETQHQVELLRKLECEEMQGFKFSKPLKPEAAANFL 678 >UniRef50_C6MIL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MIL1_9PROT Length = 576 Score = 461 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 65/406 (16%), Positives = 136/406 (33%), Gaps = 37/406 (9%) Query: 20 IEEMVSIANRR-NMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHYN 73 +++ + A N +L + +F + + ++ ++ + R + Sbjct: 165 LKDRIERALEHGNRNRQRVALLFIDLDNFKVINDSLGHDVGDKLLQAVAARFVSIVRGED 224 Query: 74 IVE---------LLCDYAPARRFGKAGMEL----------FDLRLHERDDVLQAVFDKGT 114 V LL + A ++ LH + ++F Sbjct: 225 TVARQGGDEFIVLLSNLESAFDAEAVAQKILNALQLHFLIDGKELHISGSIGISLFPDDG 284 Query: 115 SKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF 174 + + + +F+ + + L + + Sbjct: 285 EDIWTLLRNSDIAMYHAKKNGRNNCEFFKPEM-NRQAKERHSMEVALRNALKRDELL--L 341 Query: 175 AFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSK---ALAF 226 + PIV+ + FE +++ P + G I L Sbjct: 342 HYQPIVNVNGGKADGFEVLLRWQHPGDGLIYPVKFIRLAEETGMIIPIGEWLMRQSCLQI 401 Query: 227 TMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFD 286 ++INL + + + ++ + + + +E TESE+I + Sbjct: 402 KAWQEQGYEVPRLAINLSAIQF-RQKTLMENIVRILDETGVTGHYLTLEITESELIEDVE 460 Query: 287 EFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQ 346 E + ++ L GI ++ID FG G++ L L R+Q + +KI + + ++ AII Sbjct: 461 ETIKTLRQLSELGIEISIDDFGTGYSNLSFLKRYQINTLKIDRSFVRDIPDDPDDTAIID 520 Query: 347 AIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLN 392 AI+ +L +QV A GV ++ +L G FQG F+K Sbjct: 521 AILVMAHALGLQVIAEGVENEQQLAYLALHGCTRFQGFYFSKPLPA 566 >UniRef50_Q0EWZ7 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EWZ7_9PROT Length = 1217 Score = 461 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 74/419 (17%), Positives = 143/419 (34%), Gaps = 44/419 (10%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHY 72 + E++ + A RR +L N F + + + + + + R Sbjct: 798 DRFEQVAATARRR---GSNVAMLFLNLDDFHLVNDVLGRSLADHMLVQVVERLHGCIRES 854 Query: 73 N-------------------IVELLCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKG 113 + + + + D + + ++F Sbjct: 855 DTISREGGDEFIILLGDVGDLAAIEIIVQKILDAFSEPFTVDDHIVSVTSSIGISIFPND 914 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 F + + +F + L +L IN Sbjct: 915 GRDFNRLISQSEAALQKAKAAGKDTYNFFTEQMNINAL-----EHMQLQGQLRHAIINQE 969 Query: 174 F--AFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAF 226 F + P +D L+ R+I EA+V+ P + G I A Sbjct: 970 FRIYYQPQIDTLNERMIGAEALVRWQHPQHGLVPPLKFIPLAERSGLIIPLGEWVLNEAC 1029 Query: 227 TMAHALE----LGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVI 282 A + ++++NL + + V ++ ++ + L E + +E TES ++ Sbjct: 1030 RQAQVWRKRNRMPSMVMAVNLSAVQFKR-GNIVETVIQALERSGLPAENLELELTESILL 1088 Query: 283 SRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQ 342 + E + LK GI ++ID FG G++ L L R D++KI Q + ++ Sbjct: 1089 DDVEVVMETLHRLKDIGIKLSIDDFGTGYSSLSYLKRLAVDKLKIDQSFVRDMVVDPEDA 1148 Query: 343 AIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPE 401 AI+ AII+ +L++ V A GV T + L+S QG LF++ S + + Sbjct: 1149 AIVSAIIQLGHTLQLTVIAEGVETRAQLQLLKSLECNEVQGYLFSRPIPAEDFSGLFEQ 1207 >UniRef50_Q2Y6N3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y6N3_NITMU Length = 1025 Score = 461 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 69/407 (16%), Positives = 140/407 (34%), Gaps = 39/407 (9%) Query: 17 VKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEG-----PEEQVKMIYRAICQDPRH 71 + ++ + + A+R + G++ + F + + +E + + + + Q R Sbjct: 602 LDRLRQAMEHAHRNRRRV---GVVFADLDRFKIVNDTMGHSTGDELLIHVAKRLQQCVRS 658 Query: 72 YNIVELLC-------------------DYAPARRFGKAGMELFDLRLHERDDVLQAVFDK 112 + V L + EL ++ + +++ Sbjct: 659 CDTVARLGGDEFALILSDLVQPEDATLIAEKVISALQVPFELETQEIYVSASLGISIYPG 718 Query: 113 GTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTIND 172 + + F+ ++ + + + +L Sbjct: 719 DGTDADSLLRNADTAMFQAKEQGPAIYQFYLPQMNERAV-ARLKIETQLRGALARREFV- 776 Query: 173 HFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSK---AL 224 + P ++ I FEA+++ + P G I Sbjct: 777 -LHYQPKASLINGEITGFEALLRWQHPAHGLVPPLQFISVLEDTGLIVAVGEWVVKTVCE 835 Query: 225 AFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISR 284 L I+INL + D S + ++A + P + E TES ++ Sbjct: 836 QIREWQGQGLVLHPIAINLSARQFQQQ-DLDSIIGETLRATNIDPRLLEFELTESVLMKE 894 Query: 285 FDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAI 344 + A A+++LKA G+ +++D FG G++ L L RF D +KI + I +V I Sbjct: 895 AEMAANALQNLKAFGVQISMDDFGTGYSSLAYLKRFPLDVLKIDRAFIRDVTTDPDDATI 954 Query: 345 IQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 A+IK SL ++V A GV T + +L G + QG F++ Sbjct: 955 TVAMIKLAHSLGLKVVAEGVETRAQLEFLIRHGCDEMQGYYFSQPLP 1001 >UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Psychromonas ingrahamii 37 RepID=A1SZA9_PSYIN Length = 777 Score = 461 bits (1187), Expect = e-128, Method: Composition-based stats. Identities = 79/438 (18%), Positives = 156/438 (35%), Gaps = 51/438 (11%) Query: 2 LTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EE 56 LT L R + + + +++I+ R N +L + +F L + + Sbjct: 352 LTQLPNRRML-----LDSLRHVLTISARSNQH---CALLFLDLDNFKTLNDTLGHDVGDL 403 Query: 57 QVKMIYRAICQDPRHYNIVELL---CDYAPARRFGKAGME-------------------- 93 ++ + + R +IV L +E Sbjct: 404 LLQQVATRLTDCVREGDIVARLGGDEFVVLLENLSLQAIEAANKAKKVAKKIIFELAQYY 463 Query: 94 -LFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLF 152 L R H + +F + + + +++ +F ++S + Sbjct: 464 QLNMHRYHSTTSIGVTIFSGNETGIEELLKQADIAMYQSKAAGRNTWHFFNKTMQESIIA 523 Query: 153 IADGSDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVG 207 AD +++L + V S + + EA+++ SP Sbjct: 524 RAD-MERDLRKAIEDN--QFQLHYQAQVS-SSGQTLGAEALIRWQHPERGQVSPFNFIPL 579 Query: 208 QRKDGEIYTADLKSKALAFTMAHALELGDKM----ISINLLPMTLVNEPDAVSFLLNEIK 263 + G I A A + +++N+ L ++ D V + +K Sbjct: 580 AEETGLILPIGQWVLDSACAQLKAWQKNPLTQDLVLAVNISAKQL-HQEDFVEQVKATLK 638 Query: 264 ANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPD 323 + + P ++ +E TES ++ + + L GIS ++D FG G++ L L + + Sbjct: 639 RHDINPARLKLELTESMLVENISDIITKMNILSKIGISFSLDDFGTGYSSLQYLKKLPLN 698 Query: 324 RIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQG 383 +IKI Q + ++ +AI++ II SL+I V A GV T EE +L G +QG Sbjct: 699 QIKIDQSFVRDLITDASDRAIVRTIITMSHSLDISVIAEGVETVEERQYLLDNGCTHYQG 758 Query: 384 DLFAKAKLNGIPSIAWPE 401 LF+K + + Sbjct: 759 YLFSKPVPINEFEVLLKK 776 >UniRef50_A1ALB3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Desulfuromonadales RepID=A1ALB3_PELPD Length = 705 Score = 460 bits (1186), Expect = e-128, Method: Composition-based stats. Identities = 73/418 (17%), Positives = 141/418 (33%), Gaps = 43/418 (10%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLE-----GPEEQVKMIYRAICQDPRHY 72 ++ + ++ A + + +L + F + + ++ ++ + R + R Sbjct: 293 DRLRQAIAQAAQD---RHMVWVLCLDLDRFKGVNDTLGHRSGDKLLQEVARRLAACVRES 349 Query: 73 N---------IVELLCDYAPAR----------RFGKAGMELFDLRLHERDDVLQAVFDKG 113 + V +L + + + D L+ + A + Sbjct: 350 DTLARLGGDEFVVVLDGVVSEKGASIVAKKILTLIAEPIPIDDHELYTTASIGIAAYPMD 409 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 L ++ L +F + L++ D Sbjct: 410 GEDGHTLLKHADLAMYKAKELDRNNFHFFSHDMNIKVM-----ERMMLENSMRKALERDE 464 Query: 174 F--AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAF 226 F + P VD S RI EA+++ N +P + G I A Sbjct: 465 FFLVYQPQVDARSGRITGVEALLRWNHPDMGLLTPDRFIYLAEETGFIVPLGEWVLMTAC 524 Query: 227 TM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVIS 283 L +++NL + + L PE + +E TES ++ Sbjct: 525 RQNRAWQKLGFPPLRVAVNLSGKQFGQHR-LDEMISAILLETGLEPEWLELEITESAIMR 583 Query: 284 RFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQA 343 D+ ++SLK GIS+AID FG G++ L L F R+KI + + ++ + A Sbjct: 584 NADQNIAILRSLKEKGISLAIDDFGTGYSSLSYLKHFPITRLKIDKTFVQDITTNPDDAA 643 Query: 344 IIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPE 401 I + II +L++ V A GV T + +L + QG LF++ + Sbjct: 644 IAEIIIAMAQTLKLNVIAEGVETRAQMEFLSTHTCFEMQGYLFSRPLTTDKFVYLLRD 701 >UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q47ES6_DECAR Length = 832 Score = 460 bits (1186), Expect = e-128, Method: Composition-based stats. Identities = 66/424 (15%), Positives = 133/424 (31%), Gaps = 48/424 (11%) Query: 19 KIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEG-----PEEQVKMIYRAICQDPRHYN 73 + + + +LL + +F L + +E + + + + R + Sbjct: 398 MFDRLEHALIGSARRKSHGALLLIDLDNFKFLNDTHGHEVGDELLLEVAKRLKTCIRQGD 457 Query: 74 ---------IVELLCDYAPARRFGKAGMELFDL--------------------RLHERDD 104 V +L D A + Sbjct: 458 TAARLGGDEFVVILEDIDGAGNGTIQAELIAGHIQAQLNHPFSLVRPPERLSIDYRCASS 517 Query: 105 VLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSC 164 + A+FD + ++ +F+ + + + + EL Sbjct: 518 IGIALFDDTMVTAKELLRRADTAMYQAKAAGRNTLRFFDPEMQ-AAVTHRAALETELRKA 576 Query: 165 ALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADL 219 H F +D S R EA+++ + P++ + G I Sbjct: 577 ID--EQQFHLCFQVQMD-QSGRPTGGEALLRWEHPTRGTIPPASFIPLAEETGLIVPIGQ 633 Query: 220 KSKALAFTMAHALELGD----KMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVE 275 A A A +++N+ + L + + ++ +E Sbjct: 634 WVLATACRQLAAWSQQPETSGLTLAVNVSARQF-RQARFTDQLRDLLLQTGAPATRLKLE 692 Query: 276 FTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNV 335 TES ++ + + LK GI ++D FG G++ L L R +++KI Q + +V Sbjct: 693 LTESMMLEDTEAIIGRMAELKQLGIRFSLDDFGTGYSSLAYLKRLPLNQLKIDQSFVRDV 752 Query: 336 HKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIP 395 AI + I+ L ++V A GV T +W +L + G + +QG LF + Sbjct: 753 LTDPNDAAIAETIVALGNILGLEVIAEGVETDAQWRFLANVGCKNYQGYLFGRPLPLLEF 812 Query: 396 SIAW 399 Sbjct: 813 EQFL 816 >UniRef50_C6XEG9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Betaproteobacteria RepID=C6XEG9_METSD Length = 718 Score = 460 bits (1186), Expect = e-128, Method: Composition-based stats. Identities = 65/416 (15%), Positives = 143/416 (34%), Gaps = 36/416 (8%) Query: 19 KIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEG-----PEEQVKMIYRAICQDPRHYN 73 + ++ + + + ++ + F + + ++ + + R + R + Sbjct: 303 MQDRLLQAISYADRTASKLAVVFVDLDKFKDINDSMGHFIGDQLLIAMARRLESCIRDSD 362 Query: 74 IVE---------LLCDYAPARRFGKAGMELFDL----------RLHERDDVLQAVFDKGT 114 V LL + + + L + +++ Sbjct: 363 TVARPGGDEFVLLLSNIHGMDALSQTLQRVLALTSEPCSIEGKDFTVTSSIGISLYPDDG 422 Query: 115 SKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF 174 + + ++ ++ +S L + ++ + H Sbjct: 423 KTSETLLKNADTAMYKAKQEGKNNFQFYTREL-NSILVERLEMEYQMRNAL--GHNEFHL 479 Query: 175 AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTM- 228 + P ++ ++RI EA+++ + SP+ + I A Sbjct: 480 HYQPKLNLRTQRITGVEALIRWHNPRQGLISPNRFIPIAEESSLIEQIGSWVLEKACMES 539 Query: 229 --AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFD 286 L D +S+N+ P + + V + ++ L P + +E TE + Sbjct: 540 IALSQLSGYDVPVSVNVSPRQF-QQSNLVGNISRVLQETGLKPSLLELEITEGTLADTSP 598 Query: 287 EFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQ 346 +F + + LK GI +AID FG G++ L L F D +KI + + + QAI++ Sbjct: 599 QFIKVLNDLKGLGIKLAIDDFGTGYSSLGYLKHFPIDNLKIDRSFVMGLESDTANQAILK 658 Query: 347 AIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEK 402 AI+ +L I + A GV T + +L S G + QG LF++ + Sbjct: 659 AIVALGHNLGINLVAEGVETERQRDFLLSIGCDEMQGFLFSQPLPFDQAGKLLLAQ 714 >UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Betaproteobacteria RepID=Q47GC0_DECAR Length = 862 Score = 460 bits (1186), Expect = e-128, Method: Composition-based stats. Identities = 72/436 (16%), Positives = 148/436 (33%), Gaps = 49/436 (11%) Query: 2 LTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLF-NGSHFFQLLEGP-----E 55 + L + + + + + + +SD G LLF + +F L + + Sbjct: 393 INALAFFDQLTGLPNRTLLLDRLKQTILSSGRSDSHGALLFIDLDNFKTLNDTLGHDVGD 452 Query: 56 EQVKMIYRAICQDPRHYNIVELLC----------------------DYAPARRFG--KAG 91 + +K + + R + V L + + Sbjct: 453 QLLKQVALRLTHCVRDGDTVARLGGDEFVVVLANLNTNDKEAAQDTETVAEKILATLNQT 512 Query: 92 MELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWL 151 +L + H + +F L ++ +F+ E Sbjct: 513 YQLGHVTHHSSASIGATLFKGPLIPIDDLMKQADLSMYKAKAAGRNAVRFFDPSME---- 568 Query: 152 FIADGSDKELDSCALSPTINDHF--AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAI 204 IA E++ L F + + + R+ E +++ SP+ Sbjct: 569 -IAVKVRAEMEDDLLRALAEKQFLLHYQAQM--VGERLTGAEVLLRWQHPQRGMVSPAEF 625 Query: 205 AVGQRKDGEIYTADLKSKALAFTMAHAL----ELGDKMISINLLPMTLVNEPDAVSFLLN 260 + G I A T E+ +++N+ + D V +L Sbjct: 626 IPLAEETGLILPLGHWVLETACTQLAQWAGRPEVAHLTLAVNVSAHQF-RQNDFVDQVLG 684 Query: 261 EIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRF 320 ++ P+++ +E TES ++ ++ + + +LK G+ ++D FG G++ L L R Sbjct: 685 VLEKTGANPQRLKLELTESLLVENVEDIIDKMAALKHRGVGFSLDDFGTGYSSLSYLKRL 744 Query: 321 QPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEM 380 D +KI Q + +V +I + I+ SL + V A GV T + +L S+G Sbjct: 745 PLDHLKIDQSFVRDVLTDSNDASIARTIVALANSLGLGVIAEGVETEAQRDFLASSGCHT 804 Query: 381 FQGDLFAKAKLNGIPS 396 +QG F++ Sbjct: 805 YQGYYFSRPLPIEDFE 820 >UniRef50_D1U882 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U882_9DELT Length = 958 Score = 460 bits (1186), Expect = e-128, Method: Composition-based stats. Identities = 62/406 (15%), Positives = 136/406 (33%), Gaps = 40/406 (9%) Query: 20 IEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEG-----PEEQVKMIYRAICQDPRHYNI 74 ++ + + N +L + +F ++ + + +K + + R + Sbjct: 540 LDRLSMALSHANRTGTKVAVLFLDLDNFKKINDSFGHAQGDTLLKAVAERLVALYRDEDT 599 Query: 75 V-------------------ELLCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKGTS 115 V E++ +R + + + + ++ Sbjct: 600 VARQGGDEFLVVVVDVHEEREVVDLAEGLQRVFEEPFVIKGQEVFITPSIGVTLYPDDGQ 659 Query: 116 KFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF- 174 + + +++ F + L+S F Sbjct: 660 DPASLVKNADMAMYQSKAKGRNSYFLFTQQMSER-----IAQRLTLESDMRRALKEREFT 714 Query: 175 -AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSK---ALA 225 F P VD S + EA+V+ + SP + G I A Sbjct: 715 VYFQPKVDLASGEVSGLEALVRWVKPDGIIVSPEDFIPMAEETGLIVPLGEFVLDASCKA 774 Query: 226 FTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 + + +++NL P+ + D V ++ ++ N L ++ +E TES +++ Sbjct: 775 MQVLQGVGCSALTVAVNLSPIQFG-QEDLVEMVVANLERNGLPASRLELEITESTLMTDV 833 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 + L GI+++ID FG G++ L L F +KI + I ++ I+ Sbjct: 834 QSSVAQLNRLVELGITISIDDFGTGYSSLYYLKNFPISTLKIDRSFIRDITIDDSDAKIV 893 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 + ++ ++ I V A GV T E+ L + G QG +++ Sbjct: 894 ETVVLMARTMGIGVVAEGVETKEQLDLLATFGCATVQGYYYSRPLP 939 >UniRef50_B8DLW6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Desulfovibrio RepID=B8DLW6_DESVM Length = 739 Score = 460 bits (1185), Expect = e-128, Method: Composition-based stats. Identities = 69/416 (16%), Positives = 137/416 (32%), Gaps = 42/416 (10%) Query: 20 IEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHYNI 74 + + + + +L + +F + + +E ++ + + ++ Sbjct: 310 LRQRMEDHALKGGPDARLAVLYLDMDNFKTVNDSLGHAVGDELLRAVAGRLVGMAPRRDM 369 Query: 75 VELLC---------------------DYAPARRFGKAGMELFDLRLHERDDVLQAVFDKG 113 V L + A + D L+ + +V + Sbjct: 370 VARLGGDEFVVLLPLSAEGDGELAETESARIQDSFTRPFNAADHELYVMPSIGISVAPED 429 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 + + +R + F D ++ ND Sbjct: 430 GRDPATLLKNAEIAMYRAKEQGGARFRRFTQAMND-----DVTRRLAIEKSIRKGLENDE 484 Query: 174 FA--FHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAF 226 F + P VD ++ ++ EA+V+ P G + + A Sbjct: 485 FVVFYQPRVDIVTGQVTGMEALVRWARPDGTLVPPLEFIPVAEDTGLVVALGERVLRDAC 544 Query: 227 TMAHAL--ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISR 284 ELG I++N+ +PD + + + + L P Q+ +E TE+ ++ Sbjct: 545 IQTRRWTDELGPLRIAVNISARQF--QPDLLDRVQAALAESGLPPSQLELEITETTMMRD 602 Query: 285 FDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAI 344 ++ L A GIS+AID FG G + L L F D IKI + + +V I Sbjct: 603 LPTSVAILERLAAQGISIAIDDFGTGHSSLYYLKNFPIDTIKIDRSFVRDVPGDEGDATI 662 Query: 345 IQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWP 400 + I+ +L + V A GV T ++ +L + G QG ++K + Sbjct: 663 VSTIVTMGRNLSLNVVAEGVETDDQLGFLRAHGCREVQGYYYSKPLPADGFADWMR 718 >UniRef50_B7KBH1 Diguanylate cyclase/phosphodiesterase n=9 Tax=Chroococcales RepID=B7KBH1_CYAP7 Length = 712 Score = 460 bits (1185), Expect = e-128, Method: Composition-based stats. Identities = 63/415 (15%), Positives = 145/415 (34%), Gaps = 40/415 (9%) Query: 21 EEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHYN-- 73 +++++ N Q IL + F + + ++ ++ + + R + Sbjct: 291 QQLIAALNNAKRQETPLAILFLDLDGFKNINDTLGHTFGDQVLQKFGKRLLGSVRAGDTV 350 Query: 74 -------IVELLCDYAPARRFGKAGMELFD----------LRLHERDDVLQAVFDKGTSK 116 V LL + K + D + + + + +++ + Sbjct: 351 CRWGGDEFVVLLPYISHTEDSIKLAQRILDVLKHPFEIQKQQFYIKTSMGISIYPQDGED 410 Query: 117 FQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF-- 174 + + +R ++ + L++ N Sbjct: 411 GETLLKNADAALYRAKERGRNHFQFYSTTMTTKASLVLR-----LENLLHRALENQELSL 465 Query: 175 AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTM- 228 + P V + I EA+++ SP + + I + A Sbjct: 466 YYQPQVKIKTGEITGIEALLRWTHPELGQVSPHKLIPLAEQTDLIIPIGQWALKTACQQS 525 Query: 229 --AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFD 286 L + I++N +P+ V+ + ++ L P + +E TE+ ++ D Sbjct: 526 LDWQKLGIKPLPIAVNFSARQF-QQPNLVTLINQVLEETGLAPNLLELEITETTIMQNED 584 Query: 287 EFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQ 346 +A++ L+ G+ +++D FG G++ L L +F +KI Q ++ + AII Sbjct: 585 FARQALEELRQMGVHISLDDFGTGYSSLSYLQKFPLTTLKIDQCFTHSLKDNPQDLAIIS 644 Query: 347 AIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPE 401 AII L+++V A GV T ++ L+ + QG F++ + + + Sbjct: 645 AIITLGNHLQLRVIAEGVETLQQLEILQRLHCQEAQGFWFSRPLNSEDITQLLKQ 699 >UniRef50_B8DLV2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DLV2_DESVM Length = 896 Score = 460 bits (1185), Expect = e-128, Method: Composition-based stats. Identities = 76/420 (18%), Positives = 138/420 (32%), Gaps = 43/420 (10%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHY 72 ++ ++ A R + + V L + +F Q+ + + ++ + Q R Sbjct: 474 DRLGMAINGARREDRKVAV---LSVDLDNFKQVNDSLGHMVGDIYLQQAAEQMRQMVRPQ 530 Query: 73 N---------IVELLCDYAPARRFGKAGMELF----------DLRLHERDDVLQAVFDKG 113 + V +L D R + L + L V A+F Sbjct: 531 DTLARVGGDEFVVVLQDVEGERDAAQVAERLLARFTDPVRVQEHELFVGASVGIALFPDD 590 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 + + R + F D + + +L + I H Sbjct: 591 GDDPDTLVRNADIAMSRAKEQGKRRYHLFTPAMNDRAV-RRLSLEGDLHRALAAGDITAH 649 Query: 174 FAFHPIVDPLSRRIIAFEAIVQK-------NEDSPSAIAVGQRKDGEIYTADLKSKALAF 226 + P VD + I EA+ + P+ G I LA Sbjct: 650 --YQPRVDLNTGLITGMEALARWIRADGSQEH--PAEFIPLAESTGLIVPLGEHMLRLAC 705 Query: 227 TMAHA---LELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVIS 283 A D +++NL + V + + + L P + +E TES +++ Sbjct: 706 AKTRALCDAGHADLHVAVNLSVHQF-RHRNLVGMVADVLAETGLPPHLLELEITESTIVT 764 Query: 284 RFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQA 343 D + L GI++++D FG G++ L L +KI + I ++ A Sbjct: 765 DVDHTIRKLNQLAEMGIALSVDDFGTGYSSLYQLKNLPLTSLKIDRSFIRDIPDDPNDAA 824 Query: 344 IIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEKK 403 I II L ++V A GV TPE+ +L G QG LF++ + + Sbjct: 825 IAATIITMADRLGLRVVAEGVETPEQLNFLLLEGCHEVQGFLFSRPLPPDEFTALLARGR 884 >UniRef50_A6VW49 Diguanylate cyclase/phosphodiesterase n=2 Tax=Marinomonas RepID=A6VW49_MARMS Length = 659 Score = 460 bits (1184), Expect = e-128, Method: Composition-based stats. Identities = 66/414 (15%), Positives = 137/414 (33%), Gaps = 39/414 (9%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEG-----PEEQVKMIYRAICQDPRHY 72 +++E + A +R+ Q G+L + F + + +E ++ + I Sbjct: 246 QQLESALVNARKRHRQF---GLLYLDLDGFKVINDNFGHRVGDELIQRVAERIKGSIPSS 302 Query: 73 N---------IVELLCDYAPARRFGKAGMEL----------FDLRLHERDDVLQAVFDKG 113 V +L + + + + + A + + Sbjct: 303 ACLYRLGGDEFVVVLENTNEIEELESIAQSIMQNASNTYPVAKMEMMITASIGIASYPQH 362 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 + +R +E D+ + L Sbjct: 363 ADDVDNLLKNADAAMYRAKSTGHNMYCVYEDHMADN-INAHLTLGGGLRKAIE--EEQFI 419 Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTM 228 + P + ++ EA+++ SP + G I A Sbjct: 420 LHYQPKIRLPDEIVVGAEALIRWVHPELGMISPDQFIPLAEESGLILPLGEWVIRRACRQ 479 Query: 229 ---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 L +S+NL + + D V + ++ + PE + +E TES +++ Sbjct: 480 LQEWREAGLDPIKLSVNLSSRQFM-QADLVDMVQRALEETGVDPEYLELELTESMLMADA 538 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 + E + S + G++++ID FG G++ L L +F +KI + I ++ AI+ Sbjct: 539 QQSIEKLHSFRKLGLTLSIDDFGTGYSSLAYLKKFPIQTLKIDRSFIHDLGLDCDNDAIV 598 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAW 399 +A I SL ++V A GV + L + QG LF+K + + Sbjct: 599 KATIAMANSLNLKVIAEGVENRSQVDVLNGYDCQEVQGYLFSKPLSSDDFLMYL 652 >UniRef50_C1D1W4 Putative diguanylate-cyclase n=1 Tax=Deinococcus deserti VCD115 RepID=C1D1W4_DEIDV Length = 856 Score = 460 bits (1184), Expect = e-128, Method: Composition-based stats. Identities = 81/415 (19%), Positives = 146/415 (35%), Gaps = 37/415 (8%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEG-----PEEQVKMIYRAICQDPRHY 72 +++ E++ + R T +L + F + + + ++ + + R Sbjct: 443 ERLAEILEQSER---SRASTALLFVDLDEFKGVNDTVGHHVGDYVLQAVADRLLGCARRG 499 Query: 73 NIVELL---------------CDYAPARRFGKAGMELFDLR---LHERDDVLQAVFDKGT 114 ++V + ARR F ++ H + +V + Sbjct: 500 DVVARVGGDEFTLVLPFAEEPHAITVARRVLNELTRPFVVQGRAFHLGASIGISVSPQAG 559 Query: 115 SKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF 174 Q L +R FE + +L P N Sbjct: 560 RDGQTLLRHADLAMYRAKRE-KSGFAVFEAQLNQQA-QLRLQLASDLREALREPGANLEL 617 Query: 175 AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTM- 228 + P V +++ EA+V+ SP+ G I A Sbjct: 618 HYQPQVRLHDGQVVGAEALVRWRHPHLGMVSPAQFIPVAEDTGMIVPLGTWVMEEACRQA 677 Query: 229 --AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFD 286 A G +++N+ + PD V + ++A L ++ VE TES V+ Sbjct: 678 VAWAAAGHGAMRVAVNVSALQFAR-PDFVDTVSATLRATGLEAGRLEVELTESAVMEDVK 736 Query: 287 EFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQ 346 E E ++ L+A G+SVA+D FG G++ L L R + +KI + I N+ + ++++Q Sbjct: 737 ESVERMERLRALGVSVAVDDFGTGYSSLSYLQRLPLNVLKIDRTFIQNLGVNATSRSVVQ 796 Query: 347 AIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPE 401 AI+ L ++ A GV TP+E L G QG FAK + Sbjct: 797 AIVGLAQHLNLECVAEGVETPDEREALIEVGCRYAQGFFFAKPLPAPALLEWLSQ 851 >UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SK01_THIDA Length = 1059 Score = 460 bits (1184), Expect = e-128, Method: Composition-based stats. Identities = 72/432 (16%), Positives = 150/432 (34%), Gaps = 48/432 (11%) Query: 10 HIRDDEPVKKIE--EMVSIANRRNMQS---DVTGILLFNGSHFFQLLEGP-----EEQVK 59 + +P+ + E++ + MQ V +LL + +F L + + ++ Sbjct: 615 QLAFYDPLTGLPNRELLGDRLQHAMQVRHGQVGALLLIDLDNFKTLNDTLGHAMGDLLLQ 674 Query: 60 MIYRAICQDPRHYNIVEL----------------------LCDYAPARRFGK--AGMELF 95 I + + R + + L + +L Sbjct: 675 QIAQRLQTCLRKGDTLARVGGDEFVIVLEGLSASPGDAGSLATRVGEKILASFARPFQLA 734 Query: 96 DLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIAD 155 D H + +F+ + L ++ +F+ + + + Sbjct: 735 DYVHHCTASIGITLFNDRPTTLDELRKRADLAMYQAKAHGRNALRFFDPAMQ-AVVAARA 793 Query: 156 GSDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRK 210 + +L + VD + EA+++ P++ + Sbjct: 794 ELEVDLREALRLGA--FELHYQAQVDAR-GCVSGAEALLRWQHPQRGWIAPASFIPLAEE 850 Query: 211 DGEIYTADLKSKALAFTMAHAL----ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANA 266 G I L +A A + +++N+ + D + +L I+ + Sbjct: 851 TGLILPLGLWVLDVACAQLVAWSKMPHMARLSLAVNVSARQF-RQADFAAQVLAAIERSG 909 Query: 267 LVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIK 326 P ++ +E TES ++ D+ + +LKA GI ++D FG G++ L L R D IK Sbjct: 910 ADPRRLKLELTESLMLDNLDDTILKMSALKAHGIGFSLDDFGTGYSSLAYLKRLPLDEIK 969 Query: 327 ISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLF 386 I Q + +V +I ++I+ SL ++V A GV T + +L G + +QG LF Sbjct: 970 IDQSFVRDVLIDANDASIARSILALGQSLNLEVVAEGVETDAQHAFLAEHGCQAYQGYLF 1029 Query: 387 AKAKLNGIPSIA 398 + + Sbjct: 1030 NRPQPARQFEAW 1041 >UniRef50_C4L753 Diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(S) n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L753_EXISA Length = 819 Score = 460 bits (1184), Expect = e-128, Method: Composition-based stats. Identities = 62/419 (14%), Positives = 136/419 (32%), Gaps = 45/419 (10%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEG-----PEEQVKMIYRAICQDPRHY 72 +++ ++ + + + +F + + ++ +K + I + Sbjct: 408 DRLDALLGQSQSEQF-----ALYYIDLDNFKVINDRFGHSIGDQFLKQVTTRIQSTIQKT 462 Query: 73 NIVELL------------------CDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKGT 114 + + L EL + + + ++ Sbjct: 463 DTLARLGGDEFIILSPDTKSNLAAHRAQELINVLHPPFELENEEVFTGASIGISLHPSDG 522 Query: 115 SKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF 174 + + + +R +F + L + L F Sbjct: 523 DTAEELIKNADIAMYRAKADGKNGYQFFT-----NELNESVSRRSNLSMALRKGIGRGEF 577 Query: 175 --AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFT 227 + P + + +I EA+V+ N SP + G I+ A Sbjct: 578 TVHYQPQIQLETEMVIGMEALVRWNHPELGMISPGEFIPIAEETGSIHRLGEFVLNEACR 637 Query: 228 M---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISR 284 + +++N+ + + D + + A+ L + + +E TES I Sbjct: 638 QNKAWQDASIPPFRVAVNISAVQFA-QKDLPEVVSRALAASGLEAQYLELELTESV-IQS 695 Query: 285 FDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAI 344 D E + L A G+ ++ID FG G++ L L F D +KI Q N+ A+ Sbjct: 696 ADRAIETMHELVALGVHLSIDDFGTGYSSLSYLKLFPIDTLKIDQHFTKNIESDEKDAAL 755 Query: 345 IQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEKK 403 ++ II+ L++ V A GV T + +L++ QG + + + + + K Sbjct: 756 VKTIIRMAHELDLNVIAEGVETENQVAFLKAESCNQAQGYFYNRPLPAEEIEVFFQQYK 814 >UniRef50_Q1JZ20 Diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZ20_DESAC Length = 814 Score = 459 bits (1183), Expect = e-128, Method: Composition-based stats. Identities = 69/416 (16%), Positives = 148/416 (35%), Gaps = 40/416 (9%) Query: 17 VKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRH 71 + +++ + R Q +LL + F + + + + I + +CQ R Sbjct: 391 LDRLDHAIEEGMR---QHHAVAVLLIDLDRFQVINDSLGHDQGDRLLCQIGKRLCQHVRS 447 Query: 72 YNIVELLCDYAPARRFGKA-------------------GMELFDLRLHERDDVLQAVFDK 112 + V L A G + + + + ++F Sbjct: 448 TDTVSRLGGDEFALVLGDLNNEESLIPLMQDLLKEISSPCHIDNHHIVVTASIGISLFPN 507 Query: 113 GTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTIND 172 + + L +++ T++ + I + +K+L + Sbjct: 508 DGNDSITLLRNADLAMYQSKRH-KGDFTFYSSDMNQHAVKILE-LEKDLRQALERGELL- 564 Query: 173 HFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFT 227 + P V S +I+ EA+++ SP+ + G I A Sbjct: 565 -LHYQPKVSLQSGKIVGCEALIRWQHPLRGLVSPADFIPLAEETGLIVPIGTWVLEQACQ 623 Query: 228 MAHALE---LGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISR 284 A + + L +++NL + + ++ L P+ + +E TES ++ Sbjct: 624 QAISWQQQQLPTITMAVNLSSRQF-RHGNLCDVVDTILETTTLHPDLLDLEITESMIMDD 682 Query: 285 FDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAI 344 + + + +LK G+ +++D FG G++ L L RF D +KI I +V + A+ Sbjct: 683 PEGAVQTMIALKERGVLLSLDDFGTGYSSLNYLRRFPVDCLKIDASFIRDVAQDSSSAAV 742 Query: 345 IQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWP 400 +I+ L + A GV T E+ +LE ++ QG L+++ + Sbjct: 743 AVSIVDIAHHLGLTTVAEGVETVEQLDFLEKCHCDILQGYLYSRPLPAEDFTSLLR 798 >UniRef50_Q479L8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q479L8_DECAR Length = 582 Score = 459 bits (1183), Expect = e-128, Method: Composition-based stats. Identities = 73/438 (16%), Positives = 143/438 (32%), Gaps = 38/438 (8%) Query: 2 LTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDV-TGILLFNGSHFFQLLEGP-----E 55 L L Y + + E ++ A R + + ++L + +F + + + Sbjct: 143 LAYLAYHDPLTNLPNRLAFESQLAQALRGCERDNRQLALMLIDLDNFKNINDTLGHHVGD 202 Query: 56 EQVKMIYRAICQDPRHYNIVELL------------CDYAPARRFGKA-------GMELFD 96 E ++ + + + R ++V + A R + D Sbjct: 203 ELLQKVALRLRESVRSSDLVARIGGDEFVIVLPEIESPLTAARVANKVQQNMADSYRIAD 262 Query: 97 LRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADG 156 L+ + ++F S + + ++ ++ Sbjct: 263 HALYATPSIGISLFPIDGSDANTLLRNADTAMYHAKDAGRNNHQFYTARMNEAA-GERLH 321 Query: 157 SDKELDSCALS---PTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQ 208 + EL + F P V + ++ EA+++ N SP Sbjct: 322 MENELRQAISAISPGDSEFSLHFQPQVQTATGQVFGLEALLRWNNPIFGQVSPMRFIAIA 381 Query: 209 RKDGEIYTADLKSK---ALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKAN 265 + G I + D I+IN+ L + + + + Sbjct: 382 EETGLIQPLGDWVIWETCRLIRQMKQHGIEDIRIAINISAQQL-RHENLLLLVRGALSCY 440 Query: 266 ALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRI 325 L PE I +E TES + + + L A GI +AID FG G++ L L R+ Sbjct: 441 DLRPEDIELEITESTAMQNPETTLSILDQLAAMGIVLAIDDFGTGYSSLAYLKHLPIQRL 500 Query: 326 KISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDL 385 K+ + + ++ AI A I SL +++ A GV T + +L S G + QG L Sbjct: 501 KLDRSFVKDIEIDANDAAICTATIALGHSLGLELVAEGVETEAQRAFLASLGCDTLQGYL 560 Query: 386 FAKAKLNGIPSIAWPEKK 403 ++K + Sbjct: 561 YSKPMPFEETIAYLKAHQ 578 >UniRef50_B8GNC0 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GNC0_THISH Length = 655 Score = 459 bits (1183), Expect = e-128, Method: Composition-based stats. Identities = 76/416 (18%), Positives = 149/416 (35%), Gaps = 44/416 (10%) Query: 19 KIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHYN 73 +I + +A RR+ Q IL + F + + +E ++ + + + R + Sbjct: 237 RISHALDVARRRDRQV---AILFLDLDRFKVVNDSLGHAYGDELLRQVSDRLRRRLREED 293 Query: 74 ------------IVELLCDYAPARRFGK-------AGMEL-FDLRLHERDDVLQAVFDKG 113 +V+ + D + L + + +++ + Sbjct: 294 TLARWGGDEFIVLVDEVDDPQGLSLLAEGILAELAEPYRLSNGQEVFVGGSIGISLYPQD 353 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 + ++ ++ L +A L++ + Sbjct: 354 GRSAEQLIMKADTAMYQAKDQGRSNYQFYTS-----ALTLAANDRLALETSLRHALEREE 408 Query: 174 F--AFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAF 226 F + P V +I EA+V+ + P A + G I L A Sbjct: 409 FTLHYQPRVRTQDDVMIGMEALVRWHHPDKGLTAPDAFIPMAEETGLITPLGLWVLRTAC 468 Query: 227 TMAHALEL---GDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVIS 283 A +++NL L +PD VS + ++ L + +E TES +++ Sbjct: 469 RQAQTWMRLYGEPIHMAVNLSMRQL-RQPDLVSQIDAILRDTGLPASSLELELTESVLMA 527 Query: 284 RFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQA 343 A+ LKA G+ +AID FG G++ L L R D +KI + ++++ A Sbjct: 528 GDGHTLTALAELKALGVRLAIDDFGTGYSSLAYLKRLPIDALKIDRSFVSDIPHDASDMA 587 Query: 344 IIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAW 399 I II +L ++V A GV TPE+ +L+ G + +QG F+ ++ Sbjct: 588 IASTIIAMARTLGLEVVAEGVETPEQLAFLKKEGCDSYQGFGFSPPVDAQAMTLWL 643 >UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q47FQ3_DECAR Length = 1093 Score = 459 bits (1182), Expect = e-128, Method: Composition-based stats. Identities = 68/409 (16%), Positives = 148/409 (36%), Gaps = 39/409 (9%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHY 72 +++ E + A + + IL + F + + + +K + + + R Sbjct: 683 QRLGEAMDNAAQDD---TKVAILFIDLDRFKTINDSLGHHIGDTLLKNVASRLTETLRSN 739 Query: 73 NIVELL-------------CDYAPARRFGKA------GMELFDLRLHERDDVLQAVFDKG 113 + + L + + K + + L + + Sbjct: 740 DTIARLGGDEFMIILPLKANEALAGKLASKILDALRPPIRIDGHELFVTPSIGICFYPND 799 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 + ++ YF ++ + +L Sbjct: 800 GVTVNALMRNADTAMYQAKANGRNTYCYFTAEM-NAAADNYFQIESDLRRAVDRNE--FE 856 Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTM 228 + P++D + RI ++EA+V+ + P+ + G I A + Sbjct: 857 VFYQPVIDLKTHRITSYEALVRWRHPTKGLVGPAQFITVAEESGLIGEIGTIVLRQACSQ 916 Query: 229 AHAL---ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 + ++++NL P+ N+P+ + ++ L P++I +E TE+ ++ Sbjct: 917 LRSWIDEGFTSPILALNLSPIQF-NDPNLTEGICRILRDYDLTPDRIELEITETVIMQDG 975 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 + +++L + G ++ID FG G++ L L RF D +KI + IT++ + +AI+ Sbjct: 976 ELALGTLQNLSSRGFRLSIDDFGTGYSSLAYLKRFPVDTLKIDRSFITDMTANENDRAIV 1035 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGI 394 AI+ SL + V A GV T E++ L + QG AK + Sbjct: 1036 TAIMALANSLHLSVIAEGVETKEQYDLLSALNCNFAQGYYMAKPMPAEM 1084 >UniRef50_B1M2C0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M2C0_METRJ Length = 703 Score = 459 bits (1182), Expect = e-128, Method: Composition-based stats. Identities = 78/427 (18%), Positives = 151/427 (35%), Gaps = 45/427 (10%) Query: 9 SHIRDDEPVKKIEEMVSIANRRNMQSDVT-------GILLFNGSHFFQLLEGP-----EE 56 +H+ + + + R ++ +L + F + + + Sbjct: 265 AHMARHDGLTDLPNRALFYERLEIRLADLHLNGGACAVLCLDLDRFKTVNDSLGHAAGDF 324 Query: 57 QVKMIYRAICQDPRHYNIVELL-----------------CDYAPARRFG--KAGMELFDL 97 ++ + I R ++V L + AR +A + Sbjct: 325 LLRAVAHRIRAVLRADDMVARLGGDEFAVLVADADDPARAETLAARLIAAVQAPIPFGKR 384 Query: 98 RLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGS 157 RL V A + + L R FE +++ + Sbjct: 385 RLKVGLSVGIAQAPSHGFDSETLFRRADLALHRAKTEGRNTHRVFEPAMDEAE-----AA 439 Query: 158 DKELDSCALSPTINDHF--AFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRK 210 ++L+ D + P V + R++ FEA+V+ + P+A + Sbjct: 440 RRDLERDLRQAIEGDELILYYQPQVSTGTGRLLGFEALVRWEHPTRGLVPPNAFIPLAEE 499 Query: 211 DGEIYTADLKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPE 270 G I A A +++NL P + D +L + L P Sbjct: 500 SGLILPLGEWVLRAACREAARWAHP-LKVAVNLSPRQF-QQADLPERVLAILTETGLAPT 557 Query: 271 QIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQE 330 ++ +E TE+ +I+ ++ LKA G+S+A+D FG G++ L L F D+IKI + Sbjct: 558 RLELEITETLIINDMARALGILRRLKAFGVSIAMDDFGTGYSSLATLQAFPFDKIKIDRS 617 Query: 331 LITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 + +V S I++A++ SL + V A GV T + +L + + QG L +K + Sbjct: 618 FVGHVEVSPQAAVIVRAVLGLGRSLGMSVVAEGVETDAQMRFLAAEACDEAQGYLISKPQ 677 Query: 391 LNGIPSI 397 + Sbjct: 678 PIERFAE 684 >UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=A0L9T5_MAGSM Length = 1275 Score = 459 bits (1182), Expect = e-128, Method: Composition-based stats. Identities = 73/433 (16%), Positives = 140/433 (32%), Gaps = 47/433 (10%) Query: 10 HIRDDEPVKKIE------EMVSIANRRNMQSDVT-GILLFNGSHFFQLLEGP-----EEQ 57 + +P+ ++ + + R + + + G+ + F + + ++ Sbjct: 836 KLAYYDPLTELPNRALFRDRLEQEMRLSARGGKSLGLFFIDLDRFKYVNDSLGHDKGDDL 895 Query: 58 VKMIYRAICQDPRHYNIVELL-------------------CDYAPARRFGKAGMELFDLR 98 + + I R + V L + L Sbjct: 896 LIQVAGRIKHHLRTSDTVARLGGDEFTVILPGIEQTNDVARIAGAIVKSLGEVFVLQGHE 955 Query: 99 LHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSD 158 + + A+ ++ +R +F + +G Sbjct: 956 VFIGGSIGIAMHPDDGEDYETLTKHADTAMYRAKEEGRGTYKFFTSDMNE-----INGRR 1010 Query: 159 KELDSCALSPTINDHF--AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKD 211 L+ + + P VD RI EA+V+ N SP + Sbjct: 1011 LSLERALRQAVECNQLTLHYQPKVDVKQCRITGMEALVRWNHPEQGLVSPVDFIPIAEET 1070 Query: 212 GEIYTADLKSKALAFTMAHAL---ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALV 268 G I T A A L ++INL + V+ L ++ + L Sbjct: 1071 GLIITIGEWVMQQACMDAKRLARSSRHPLQVAINLSAKQF-QDALLVAKLERSLQQSGLA 1129 Query: 269 PEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKIS 328 PE + VE TES + + E I L+A G+ V+ID FG G++ L L + + +KI Sbjct: 1130 PELLEVEITESLAMGDVNRTIEQIGELRALGVKVSIDDFGTGYSSLSYLKKLPLNALKID 1189 Query: 329 QELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 + I +++ AI+ +I+ ++L + V A GV + +L QG F+K Sbjct: 1190 KSFIQDLYLDSDDTAIVSSILSMASALGLSVVAEGVENQAQIHFLCEKECPTIQGYFFSK 1249 Query: 389 AKLNGIPSIAWPE 401 + Sbjct: 1250 PLPFEAFEKFLLD 1262 >UniRef50_B1XZW3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=cellular organisms RepID=B1XZW3_LEPCP Length = 1069 Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats. Identities = 72/418 (17%), Positives = 146/418 (34%), Gaps = 40/418 (9%) Query: 17 VKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRH 71 ++++ + A R + V L + F + + + ++ + + + R Sbjct: 640 IERLRLALQQARRTGQKVAV---LFIDLDRFKNINDSLGHHVGDGLLRSVAQRLVDGVRA 696 Query: 72 YNIVELL------------------CDYAPARRF--GKAGMELFDLRLHERDDVLQAVFD 111 + V L R + + +H V +VF Sbjct: 697 GDTVSRLGGDEFVVVLNGLADIEEVAHVVEQRLIPRVRQPHGVQGAEIHVSCSVGISVFP 756 Query: 112 KGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTIN 171 + ++ + +F + L S ++ Sbjct: 757 DDAQDIDELMRQADVAMYQAKAQGRNGAQFFTAEMNQRA-QARLMVENHLRSAVAQGQLS 815 Query: 172 DHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAF 226 + P + R+ E +++ + P + G I A Sbjct: 816 --LHYQPRIHVADGRVAGVEGLLRWHSPELGHVPPDRFIPVAEETGLIIEIGAWVIEAAC 873 Query: 227 TM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVIS 283 L + +SINL + L +P + L ++ +A+ P Q+ +E TES ++ Sbjct: 874 AQIERWRGQGLQEVAVSINLSALQL-RDPGLLDVLRASLERHAVPPGQLELELTESILMD 932 Query: 284 RFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQA 343 + D + +L+ G+ ++ID FG G++ L L+RF D++KI + + ++ A Sbjct: 933 QVDAHLVTLHALRELGLRLSIDDFGTGYSSLNYLTRFPIDQLKIDRSFVRDMLDDPRDLA 992 Query: 344 IIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPE 401 II+AII +L ++V A GV E L +AG + QG FA+ + + Sbjct: 993 IIKAIIGLGHTLGLKVVAEGVERELEVQALRAAGCDELQGYHFARPMAADTATAWLLD 1050 >UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALY4_PELPD Length = 1238 Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats. Identities = 67/420 (15%), Positives = 141/420 (33%), Gaps = 40/420 (9%) Query: 17 VKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRH 71 ++++ + A+R V + + HF + + + + + R Sbjct: 820 MERLILALQQAHRNGRHVAV---IFIDLDHFKNINDSLGHHVGDCVLVTAANRLSMGVRD 876 Query: 72 YNIVELL------------------CDYAPAR--RFGKAGMELFDLRLHERDDVLQAVFD 111 + V L + R + + LH + ++F Sbjct: 877 GDTVSRLGGDEFVIILADIEDSHQIEEIMKHRLLPLMRQPYDAGGYELHCSCSIGISIFP 936 Query: 112 KGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTIN 171 + + +R + ++ + + L + Sbjct: 937 EDGLDKDTLLRNADTAMYRAKEVGRNNYHFYTEELNSRAMQ-RLSIETSLRKGIERNELL 995 Query: 172 DHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAF 226 + P +D + + EA+++ SP + G I + A Sbjct: 996 --LHYQPKLDLHTGKPYGLEALLRWQHPDHGMISPMEFIPIAEETGLIIPIGKQVIRNAC 1053 Query: 227 TMAHAL---ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVIS 283 + +S+N+ + + V L+ ++ + P +I +E TE+ ++ Sbjct: 1054 RQLSRWSSVGMSHICLSLNVSAVQF-RDRRFVEDLVQLVREEGVSPHRIELELTETMLME 1112 Query: 284 RFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQA 343 +++LK G +ID FG G++ L L RF D +KI + I + + A Sbjct: 1113 DAVRTIRVMETLKDEGFLFSIDDFGTGYSSLNYLHRFPIDCLKIDRSFIRGMLERPADLA 1172 Query: 344 IIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEKK 403 II+AII +L++QV A GV +E+ L +AG + QG A+ ++ Sbjct: 1173 IIKAIIGLGHTLDMQVIAEGVEKEDEYRALRAAGCDGIQGYFVARPLTPEQVPEWLLARE 1232 >UniRef50_C5SCB7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SCB7_CHRVI Length = 811 Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats. Identities = 77/414 (18%), Positives = 149/414 (35%), Gaps = 37/414 (8%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHY 72 +++E + +A R N + V L + F + + + + + + I Q RH Sbjct: 394 ERLEFSIELARRENTRFAV---LFIDIDRFKHINDSLGHVFGDRVLIEVAQRIRQCLRHV 450 Query: 73 NIVELL----------------CDYAPARRFGK--AGMELFDLRLHERDDVLQAVFDKGT 114 + + L + R EL L+ + A++ + Sbjct: 451 DTIARLGGDEFVLLLHRVESHGAELVARRLLESMAQPFELDGLKFSLSCSIGIALYPEDG 510 Query: 115 SKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF 174 + + +++ + L D + + Sbjct: 511 ETLDDLIKNADSAMYHVKEHGRGDCCFYQRQM-NVGLLERVRIDHAMREALQQG--HFWL 567 Query: 175 AFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTMA 229 A+ P +D +S +I EA+V+ N+ P + G I A Sbjct: 568 AYQPQIDLVSGLVIGAEALVRWNDPDLGELAPGRFIPIAEETGFIVALGGWVLREAIRQG 627 Query: 230 HALELGDKMIS--INLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDE 287 + +S +N+ ++ + + L + L P ++ +E TES +I +E Sbjct: 628 AHWQAQGIRLSLSVNVSATQF-HQANFIDLLAQWLDETGLPPGRLELELTESILIQNVEE 686 Query: 288 FAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQA 347 +++L A G+ +AID FG G++ L L RF ++KI + + ++ AI A Sbjct: 687 TLRRLENLVALGVRLAIDDFGTGYSSLAYLKRFPIHKLKIDRSFVCDIPHDESDTAIATA 746 Query: 348 IIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPE 401 +I + L+++V A GV T + +L AG FQG L A A + Sbjct: 747 VIGLASVLKLRVIAEGVETDIQRQFLLDAGCHEFQGYLCAPALEPAAFLARIAQ 800 >UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YAT8_NITMU Length = 705 Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats. Identities = 74/419 (17%), Positives = 151/419 (36%), Gaps = 43/419 (10%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHY 72 ++ + A R +++ +L + F + + ++ +K + + + R Sbjct: 295 DRLRIAIENARRYSIRL---ALLFVDIDRFKLVNDSLGHEIGDKLLKAVAQRMQSTVRQA 351 Query: 73 N---------IVELLCDYAPARRFGK----------AGMELFDLRLHERDDVLQAVFDKG 113 + V LL A + ++ + L + +++ Sbjct: 352 DTVSRVGGDEFVVLLSRIETATDAARSAEKLITSISQPYQIEEHELLLTASIGISIYPDN 411 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 + + + ++ L A L+ D Sbjct: 412 GKDASSLTRNADAAMYSAKGQGRNRYQFYSED-----LTYAAAERLRLEHDLRGALSRDE 466 Query: 174 FA--FHPIVDPLSRRIIAFEAIVQKNE-----DSPSAIAVGQRKDGEIYTAD---LKSKA 223 + P ++ + R+I EA+++ N SP++ G I L+ Sbjct: 467 IFPLYQPQIELATGRVIGVEALMRWNRAGQGLISPASFIPVAEDSGLILALGEYILRKAC 526 Query: 224 LAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVIS 283 L H + I++N+ + + D +L + PE + +E TES V+ Sbjct: 527 LQARQWHEHQGFQGTIAVNVSAVQF-RQNDFTDVVLRVLSETGFPPECLELEVTESVVMQ 585 Query: 284 RFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQA 343 + + + L++ GI +AID FG G++ L L +F DR+KI Q + ++ QA Sbjct: 586 GLESVVQKMGILESHGIKLAIDDFGTGYSSLSYLRQFAIDRLKIDQSFVRDLPGDADAQA 645 Query: 344 IIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEK 402 II+AI+ SL ++V A GV T + +L+ QG L+A+ + + Sbjct: 646 IIRAIVAMGRSLGLRVMAEGVETEAQARFLQDIECTESQGYLYARPMKSNDFEAWLKTR 704 >UniRef50_Q2BPG4 Sensory box/GGDEF family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BPG4_9GAMM Length = 862 Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats. Identities = 66/432 (15%), Positives = 144/432 (33%), Gaps = 45/432 (10%) Query: 2 LTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EE 56 LT+L R H + + A +L + HF ++ + +E Sbjct: 444 LTSLPNRMHSSTQLDLMISHTIKHQAT--------AALLFIDLDHFKEINDTLGHSTGDE 495 Query: 57 QVKMIYRAICQDPRHYNIVELL-----------------CDYAPARRFGK--AGMELFDL 97 ++ + + + + R +IV L + + + + Sbjct: 496 LLRKVSQRLRRSVREEDIVARLGGDEFTVITGVLETRSDAESIAQKLLNELIRPYLIDGN 555 Query: 98 RLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGS 157 L + + F + ++ + + + + + Sbjct: 556 ELSVTASIGVSFFPEDGDNSEILLRNADSAMYEAKRNGRNGYRLYTSAMTEEISERFALT 615 Query: 158 DKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDG 212 + EL + F P VD + I+ EA+++ N P G Sbjct: 616 E-ELREAISREEL--ELYFQPQVDIRTGSILGAEALLRWNHPQRGMIPPDRFIPIAESSG 672 Query: 213 EIYTADLKSKALAFTM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVP 269 ++ + I++N+ + E V + + ++ P Sbjct: 673 QMIKIGAWVLEQVCAKVAGWKERGIVAPKIAVNISNQQMNRE--LVEQITELLASSKCDP 730 Query: 270 EQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQ 329 + +E TES ++ ++ A + SLKA G+ +AID FG G++ L L + +++K+ + Sbjct: 731 ACLELEITESCLMENPEQMAHELSSLKALGVGIAIDDFGTGYSSLSYLKQLPINKLKVDR 790 Query: 330 ELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 ++++ AI +AI+ S+ + V A G+ T E+ L QG ++K Sbjct: 791 SFVSDLQDDENDLAITRAIVAMGQSMNLNVIAEGIETQEQIDLLLKLECFEGQGYFYSKP 850 Query: 390 KLNGIPSIAWPE 401 + Sbjct: 851 LPEEQFLAYLDQ 862 >UniRef50_Q2W3S8 Predicted signal transduction protein containing a membrane domain n=4 Tax=Bacteria RepID=Q2W3S8_MAGSA Length = 548 Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats. Identities = 66/415 (15%), Positives = 129/415 (31%), Gaps = 39/415 (9%) Query: 21 EEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHYNIV 75 + + + N ++ F + + + + + R + R + Sbjct: 135 DRIGQAVLQANRTGASVALMTMGLDRFTLVNDALGHGAGDRLLMEVARRLKMCVRETDTA 194 Query: 76 ELLC------------------DYAPARRFGKAGMELFDLRLHERDDVLQAVFDKGTSKF 117 L A K L + + +V+ Sbjct: 195 VRLDGDKFALVMAIADTDDSVIVAEKALNAVKEPFALDGQEVVVTFSIGISVYPLDADSS 254 Query: 118 QLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFA-- 175 V Q +F S EL+ N F Sbjct: 255 AQLVKHAENALHYAKVSGRNQYQFFSKDMNRKA-----KSRLELEGRMRRALANQEFVVF 309 Query: 176 FHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSK---ALAFT 227 + P V I+ EA+++ + P + G+I + Sbjct: 310 YQPKVSADRDAIVGAEALIRWMDPERGMVPPGEFIPVAEESGQIEPIGTWVLRQSCIQNR 369 Query: 228 MAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDE 287 + +S+N+ P + + + + L P+ + +E TES +++ D Sbjct: 370 LWQEAGFNPIKVSVNVSARQF-RSPSLLQTVTEVLDSTGLDPKWLELEITESMLMNDVDT 428 Query: 288 FAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQA 347 +K+L+ GI ++ID FG G++ L L RF +KI + I +V + I +A Sbjct: 429 AVRKMKALRDLGIGLSIDDFGTGYSSLSYLGRFPITTLKIDRAFIADVDTNPKTAEIARA 488 Query: 348 IIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEK 402 II L ++V A G E M+L + G + QG +++ ++ Sbjct: 489 IIGLSRGLNLEVVAEGAEIAEHIMFLRNNGCDTVQGFYYSRPVPADEFERMMGQR 543 >UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6C0_BREBN Length = 708 Score = 458 bits (1180), Expect = e-127, Method: Composition-based stats. Identities = 69/432 (15%), Positives = 143/432 (33%), Gaps = 45/432 (10%) Query: 10 HIRDDEPVKKIEEM---VSIANRRNMQSDV----TGILLFNGSHFFQLLEG-----PEEQ 57 H+ + + + V ++ MQ+ +L + F + + + Sbjct: 281 HLAYHDALTDLPNRRMYVQQLSKEMMQAKRFQSSLAVLFLDLDRFKDVNDSFGHDVGDML 340 Query: 58 VKMIYRAICQDPRHYNIVELLC------------DYAPARRFGKA-------GMELFDLR 98 + + + + ++V L D A + EL Sbjct: 341 LIEASKRLQACLKPGDVVARLGGDEFTIMQNQLLDRNEATELAEQIMYQLQRPFELDGHV 400 Query: 99 LHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSD 158 + + A++ + + + +F+ E L + Sbjct: 401 FNVSCSIGIALYPQDGDNPEDLLKRADTALYTVKSRGKNGYDFFDPSMEAKSL-ERILME 459 Query: 159 KELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGE 213 E+ + P +D + + EA+V+ P+ + G Sbjct: 460 NEMRKAIEQ--EQFQIYYQPKIDIATSAMTGMEALVRWVHPELGIIPPNRFIPIAEETGM 517 Query: 214 IYTADLKSKALAFTM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPE 270 I A H +S+NL + + D V + + ++ L P Sbjct: 518 ILALGEWILKQACKQNKNWHDQGYT-LKVSVNLSARQIY-QKDLVEMIKDILQETKLSPH 575 Query: 271 QIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQE 330 + +E TES + +E ++ ++ GI ++ID FG G++ + D IKI Sbjct: 576 WLELEITESIFVK-MEEATAVLQQIRDIGIQISIDDFGTGYSSFSYIKSLPVDTIKIDAS 634 Query: 331 LITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 I ++H + QAI++AI+ SL + V A G+ ++ L+ G + QG LF+K Sbjct: 635 FIRDIHHNQESQAIVKAIVTIAQSLNMNVIAEGIELHDQVAALKENGCDHGQGYLFSKPL 694 Query: 391 LNGIPSIAWPEK 402 ++ Sbjct: 695 PTDDFDQLLRQE 706 >UniRef50_Q3A0D5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A0D5_PELCD Length = 1141 Score = 458 bits (1180), Expect = e-127, Method: Composition-based stats. Identities = 70/423 (16%), Positives = 139/423 (32%), Gaps = 43/423 (10%) Query: 10 HIRDDEPVKKIE------EMVSIANRRNMQSDVT-GILLFNGSHFFQLLEGP-----EEQ 57 H+ +P+ + + + A + + ++ + F + + + Sbjct: 690 HLAFHDPLTGLANRLLFMDRIEQAIAHAHRHHESFALMFLDLDRFKTINDSLGHSAGDAA 749 Query: 58 VKMIYRAICQDPRHYNIV---------ELLCDYAPARRFG----------KAGMELFDLR 98 +K + + + R + V LL + ++ D Sbjct: 750 LKEVAQRLTTCLRETDTVSRFGGDEFNVLLSGPSHEEEIELIAHKILKSLAWPYDINDHE 809 Query: 99 LHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSD 158 + + A + K + + +R L ++ L + Sbjct: 810 VFMTCSIGIASYPKDGREAITLVKNADTALYRAKDLGRNNFQFYSSSMNARAL-ERMAME 868 Query: 159 KELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGE 213 L + H + P V S RI E +V+ +PS + G Sbjct: 869 SSLRRMFERQELRVH--YQPQVGLQSGRITGLEGLVRWEHPVGNMIAPSVFVPLAEETGL 926 Query: 214 IYTADLKSK---ALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPE 270 I + IN+ L + D ++ +K L P Sbjct: 927 IVPMGEWVLQAGCYQLKTWLDAGFAPMRLGINVSAHQL-QKSDFAELVMQVLKECDLPPH 985 Query: 271 QIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQE 330 + +E TE+ ++ +E E ++ L+A GI+++ID FG GF+ L L D +KI + Sbjct: 986 YLNLEITETVIMHNMNEAFETLRRLRAVGITISIDDFGTGFSSLSYLKDLPADHLKIDRA 1045 Query: 331 LITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 + N+ I + II+ L ++V A GV + +L AG + QG L ++ Sbjct: 1046 FVQNLPFGNNEANIARHIIEMAHGLNLKVIAEGVENQAQLDFLREAGCDEIQGFLVSRPL 1105 Query: 391 LNG 393 Sbjct: 1106 AAE 1108 >UniRef50_A4U1P1 Sensory box/GGDEF family protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U1P1_9PROT Length = 768 Score = 458 bits (1180), Expect = e-127, Method: Composition-based stats. Identities = 70/416 (16%), Positives = 148/416 (35%), Gaps = 39/416 (9%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLE-----GPEEQVKMIYRAICQDPRHY 72 ++I+ + A + + +L+ + F + G + + I + R Sbjct: 357 EQIQRAIGRA--KTERHG-LAVLILDLDDFSHYNDVLGHDGGDHLLLAITERLMSTARGI 413 Query: 73 NIVE-------------------LLCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKG 113 + ++ + + ++ + + ++ Sbjct: 414 ESLARVGGDEFGFLLLTTDGGESVVELAGSLTKAMRRPFDINGHDVQVGAAIGITLYPDD 473 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 + + + +R +F D+ L + + +L + Sbjct: 474 GADADTLLKNADMAMYRAIEDNPNGYRFFAPTM-DAELALRRRLESDLRKAIQRDEL--E 530 Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNE-----DSPSAIAVGQRKDGEIYTADLKSKALAFTM 228 + PIVD SRRII+FEA+++ N SP +G I A Sbjct: 531 LHYQPIVDTQSRRIISFEALLRWNHADDGWISPVEFIPMAEGNGMIGPIGEWVLRRACQQ 590 Query: 229 AHAL---ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 + +++N+ + L + D + + + ++ +E TE+ V+ Sbjct: 591 MRDWDRMGIPPVPVAVNMSALQLKRQ-DVPMLVRKMLTEAGVPSHRLELELTETTVMEDA 649 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 D + G+ +A+D FG G++ L L RF ++KI + + ++ + AI Sbjct: 650 DAAQRIFADIAGLGVRLAVDDFGTGYSSLARLKRFPVGKLKIDRSFVGDLAEDEGDAAIA 709 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPE 401 +AII ++ ++V A GV TPE+ L AG + QG LF++A + Sbjct: 710 RAIISMGHAMGLKVVAEGVETPEQLAILAEAGCDAIQGFLFSRAVPADQAAELLRR 765 >UniRef50_B6QZR2 Sensory box/ggdef family protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QZR2_9RHOB Length = 1031 Score = 458 bits (1179), Expect = e-127, Method: Composition-based stats. Identities = 80/420 (19%), Positives = 164/420 (39%), Gaps = 42/420 (10%) Query: 1 MLTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLE-----GPE 55 MLT L R++ R ++ ++ + N+ + ++ +++ + F + + + Sbjct: 571 MLTGLPNRTYFR-----ERFQQAIE--NQACAEETISAVMVLDLDRFKDINDLYGHPVGD 623 Query: 56 EQVKMIYRAICQDPRHYNIVELL------------CDYAPARRFGKAGMELFDLRLHE-- 101 + ++ + R + H++ V L A +E+ +H Sbjct: 624 KLIQTVARRLNACVTHHDTVARLGGDEFAIIQVNLKTTAEVGLLTNKIIEVLSKPIHVGN 683 Query: 102 ------RDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIAD 155 + A+ + + + + +FE E++ L + Sbjct: 684 NITIRTSASIGIALIPEHGTDPDELMSKADIALYEAKEAGRNTFAFFEDKMEEAIL-LRR 742 Query: 156 GSDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRK 210 + +L + + + F P +R I+ FEA+++ N P+ + Sbjct: 743 TMEGDLRNALENEEL--QLHFQPQARSDTRSIVGFEALLRWNHPEKGLIAPNNFIPVAEE 800 Query: 211 DGEIYTADLKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPE 270 G I A A + +NL P+ +E + + + + L PE Sbjct: 801 SGLIIPIGRWVLNEACAQASQWP-ERYRVGVNLSPVQFCDEY-LIQEVEGALARSGLTPE 858 Query: 271 QIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQE 330 ++ +E TES +I ++ LK GI++A+D FG G++ L L RF DR+KI + Sbjct: 859 RLELEITESVLIHDDRRALNTLRQLKELGITIALDDFGTGYSSLSYLRRFPFDRLKIDRS 918 Query: 331 LITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 ++ V ++ AII+A+I +L ++V A GV T E L + + QG L + + Sbjct: 919 FVSGVTQTPELAAIIRAVIDLGQALGMEVIAEGVETEPELELLRNESCDEVQGYLIGRPQ 978 >UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7V0E6_PSEA8 Length = 1415 Score = 458 bits (1179), Expect = e-127, Method: Composition-based stats. Identities = 68/434 (15%), Positives = 141/434 (32%), Gaps = 45/434 (10%) Query: 5 LIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLF-NGSHFFQLLEGP-----EEQV 58 L Y + ++ + A ++ ++ +L+F + F + + + + Sbjct: 977 LAYYDALTHLPNRTLFQDRLHTALQQAERNGQWVVLMFLDLDRFKPINDSLGHAAGDRML 1036 Query: 59 KMIYRAICQDPRHYNIVELL--------------CDYAPARRFGKA---------GMELF 95 + + + + V + + A R A L Sbjct: 1037 QEVATRLSACVSQDDTVARMGGDEFTLLLPSQGDREIALKRAIQVAELILGRLARPFTLE 1096 Query: 96 DLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIAD 155 + A+ + ++ L + + + +++ L Sbjct: 1097 GREFFVTASIGVALSPQDGAELSLLMKNADTAMYHAKEMGKNNFQFYQAEMNARAL---- 1152 Query: 156 GSDKELDSCALSPTINDHF--AFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQ 208 EL+S F + P RR+ EA+++ PS Sbjct: 1153 -ERLELESDLRRALELGEFVLHYQPQFTGDGRRLTGAEALLRWQHPRRGLVPPSEFIPVL 1211 Query: 209 RKDGEIYTADLKSKALAFTMAHALELGDKMI---SINLLPMTLVNEPDAVSFLLNEIKAN 265 + G + A A + + S+NL + + + Sbjct: 1212 EEIGLVAQVGDWLLAEACKQLRSWHKAKVRVPKVSVNLSARQFA-DGQLGERIAAILYET 1270 Query: 266 ALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRI 325 + P + +E TES ++S E + + LK G+++A+D FG G++ L L +F D + Sbjct: 1271 GIPPACLELELTESILMSDVAEAMQILSGLKRLGLAIAVDDFGTGYSSLNYLKQFPIDVL 1330 Query: 326 KISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDL 385 KI + + + I +AII SL + V A GV + + +L G + QG L Sbjct: 1331 KIDRSFVDGLPHGEQDAQIARAIIAMAHSLNLMVIAEGVESQAQLDFLREHGCDEVQGYL 1390 Query: 386 FAKAKLNGIPSIAW 399 F + + + Sbjct: 1391 FGRPMPAEQFGMLY 1404 >UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Bacteria RepID=B1XZA8_LEPCP Length = 1147 Score = 458 bits (1179), Expect = e-127, Method: Composition-based stats. Identities = 82/417 (19%), Positives = 145/417 (34%), Gaps = 40/417 (9%) Query: 19 KIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEG-----PEEQVKMIYRAICQDPRHYN 73 ++++ + A R + V LL + F + + +E +K + + + Q R + Sbjct: 733 RLDQALHQAEREGRRLAV---LLLDLDRFKDINDSYGHLAGDELLKYVAQRLTQRLRQSD 789 Query: 74 IVELL-------------CDYAPARRFGKAGMELF-------DLRLHERDDVLQAVFDKG 113 + L D AR + L + + + ++ Sbjct: 790 TLARLGGDEFALLMHDLRHDDDAARLASELLSGLSEPWRSSEGVEVSVGVSIGICIYPDH 849 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 Q +R Y+ + L + Sbjct: 850 GRTPQTLLQGADAALYRAKGDGRGVYRYYADEM-TRIARERLHIEARLRRALADGQLL-- 906 Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTM 228 + P VD S RII EA+V+ + P G I A Sbjct: 907 LHYQPQVDLRSGRIIGAEALVRWQDPEQGLIPPVRFIPVAEATGLIGEIGAWVLGEACRQ 966 Query: 229 AHAL---ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 A A L +++N+ P ++ D + ++ + L P + +E TE ++ R Sbjct: 967 ARAWLDAGLPALTVAVNVSPRQF-HQADLATQVMQVLVETGLPPTHLELELTEGALMERE 1025 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 E + ++ L+ G+ VAID FG G++ L L RF D +KI + IT++ I Sbjct: 1026 AEALQVLQRLRGLGVGVAIDDFGTGYSSLASLKRFPIDVLKIDRSFITDIPDDPDDMEIA 1085 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEK 402 AII SL I V A GV T E+ +L+ + +QG L ++ E+ Sbjct: 1086 AAIIAMGHSLGILVLAEGVETAEQLAFLQQRNCDRYQGFLRSRPLPAQAFEQLLREQ 1142 >UniRef50_Q3A6S1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A6S1_PELCD Length = 947 Score = 457 bits (1178), Expect = e-127, Method: Composition-based stats. Identities = 76/393 (19%), Positives = 142/393 (36%), Gaps = 30/393 (7%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGPEEQVKMIYRAICQDPRHYNIVEL 77 K+ +++ Q+ T ++ + G F LL G + A D I++ Sbjct: 565 DKLLKVIGQRLVAVAQNGAT-VVRWEGDKFVVLLPGLSD-------AETADTVARQILQS 616 Query: 78 LCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATE 137 + + E+ D + AV+ + + + + + + L Sbjct: 617 IAEP----------CEVDDQSFFVTASIGGAVYPQHGADGDKLLKNADMAMYASKELGRN 666 Query: 138 QSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKN 197 F L G + L A+ P VD + +++ EA+++ Sbjct: 667 TYCTFTEEMNRRVL-ERSGLEHNLRLALAR--EEFFLAYQPQVDQATGKVLGSEALLRWR 723 Query: 198 E-----DSPSAIAVGQRKDGEIYTADLKSKALAFTM---AHALELGDKMISINLLPMTLV 249 SP + G I A I++NL Sbjct: 724 HAEKGMISPGQFIPLAEESGLILPIGHWVLQTACAQNKAWQLAGYPPMRIAVNLSARQF- 782 Query: 250 NEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGA 309 +PD + +K L P + +E TES +++ D E +++L+ G+ +AID FG Sbjct: 783 QQPDFFDQVAQVLKDTELDPRYLELELTESLLMADADVAVETLRALRDLGVGIAIDDFGT 842 Query: 310 GFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEE 369 G++ L L F DRIKI+QE + ++ + AI++ +I L + + A GV T + Sbjct: 843 GYSSLSYLKTFPIDRIKIAQEFVLDITRDPGDAAIVETVIAMAHGLGLDIVAEGVETEAQ 902 Query: 370 WMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEK 402 +L + ++ QG F + E Sbjct: 903 LEFLRARRCQVMQGYYFGRPMPAENFIEYLSEN 935 >UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=15 Tax=cellular organisms RepID=A1TI51_ACIAC Length = 1499 Score = 457 bits (1178), Expect = e-127, Method: Composition-based stats. Identities = 73/425 (17%), Positives = 140/425 (32%), Gaps = 47/425 (11%) Query: 17 VKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRH 71 + ++ ++ A RR +L + +F L + + ++ + + R Sbjct: 1079 MDRMRHALATAQRRRQGG---ALLFIDLDNFKTLNDTLGHDQGDVLLQQVAARLNTCVRS 1135 Query: 72 YNIVELL-----------------CDYAPARRFGK-------AGMELFDLRLHERDDVLQ 107 + V L AR G+ L + Sbjct: 1136 VDTVARLGGDEFVVMIEGLSTHPGELAMSARTVGEKILAVLATPYVLQGYHYRSTPSIGV 1195 Query: 108 AVFDKG-TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCAL 166 A F G TS L ++ +F+ + + + + +L + Sbjct: 1196 APFGDGRTSTVGELLKQADLAMYQAKTAGRNTLRFFDPGMQ-AVVTARAELENDLRTALA 1254 Query: 167 SPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKS 221 + P +D + EA+V+ SP + G + Sbjct: 1255 REQFM--LHYQPQID-RRGSVTGVEALVRWPHPQRGMVSPGEFIPLAEETGLVLPLGRWV 1311 Query: 222 KALAFTMAHAL----ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFT 277 A G +++N+ +E V ++ I A ++ +E T Sbjct: 1312 LHTACAQLARWQHVPGRGHLSMAVNVSSRQFHHEA-FVEDVVRAITATGAPASRLKLELT 1370 Query: 278 ESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHK 337 ES + + + +L++ G+ ++D FG G++ L L R D++KI Q + ++ Sbjct: 1371 ESLFVEDMETTIATMAALRSHGVGFSLDDFGTGYSSLSYLKRMPLDQLKIDQSFVRDLLA 1430 Query: 338 SGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSI 397 AI+ II SL + V A GV T E+ LE AG +QG F++ Sbjct: 1431 DPNDAAIVDTIIALSRSLGLDVIAEGVETAEQRTRLEQAGCRAYQGYFFSRPLPETALED 1490 Query: 398 AWPEK 402 +K Sbjct: 1491 FLVQK 1495 >UniRef50_Q47AR1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47AR1_DECAR Length = 655 Score = 457 bits (1178), Expect = e-127, Method: Composition-based stats. Identities = 66/422 (15%), Positives = 147/422 (34%), Gaps = 47/422 (11%) Query: 10 HIRDDEPVKKIEEMVS-IANRRNM------QSDVTGILLFNGSHFFQLLEGP-----EEQ 57 ++ +P+ + ++ A+ + + +L+ + +F + + + Sbjct: 221 YLARHDPLTNLPNRLALDAHLDTLLEGATPGINRLALLIIDLDNFKTINDSLGHHAGDRL 280 Query: 58 VKMIYRAICQDPRHYN------------IVELLCDYAPARRFGKA-------GMELFDLR 98 + + R + +V+ L + + + Sbjct: 281 LSELARRLGAQMDLTKRLFRLGGDEFVVVVDQLINEEAVIELVQQLAGGIGDPCNIDGHV 340 Query: 99 LHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSD 158 LH + +++ + Q + + +F P + Sbjct: 341 LHCTSSIGISLYPEDGRDAQALIRNADTAMYYAKANGRNNHKFFTEPMNAAA-----NKR 395 Query: 159 KELDSCALSPTINDHF--AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKD 211 L+S + + P +D LS +++ EA+V+ P+ + Sbjct: 396 LHLESELWCALAENQLVLYYQPQIDLLSGKVVGVEALVRWRHPLRGLIPPAEFIPVAEEC 455 Query: 212 GEIYTADLKSKALAFTMAHAL---ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALV 268 G I A A + +++N+ +P+ +S + + L Sbjct: 456 GLILPLGHWVLLTACRQAREWLDAGIDMGEMAVNISAHQF-RQPEFISSVQAILAETGLP 514 Query: 269 PEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKIS 328 ++ +E TES ++ D + + L+A GI +AID FG G++ L L RF DR+KI Sbjct: 515 TGRLELEITESTIMHEVDAAIQTLAQLRAMGIKLAIDDFGTGYSSLAYLRRFPLDRLKID 574 Query: 329 QELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 + + +V +++ +I+ SL +Q+ A GV + +L + E QG F + Sbjct: 575 RSFLADVETDPDAASLVTSIVLLGRSLGLQLVAEGVENFAQAEFLRTLECERVQGFHFYQ 634 Query: 389 AK 390 Sbjct: 635 PV 636 >UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1I4_ACIDE Length = 830 Score = 457 bits (1178), Expect = e-127, Method: Composition-based stats. Identities = 70/423 (16%), Positives = 143/423 (33%), Gaps = 50/423 (11%) Query: 17 VKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRH 71 + +++ V+ A R Q +L + +F L + + + + + R Sbjct: 414 LDRLQRAVA-ATSRTQQFG--ALLFIDLDNFKDLNDTLGHDMGDHLLSQVAARLLACVRE 470 Query: 72 YNIVELL----------------------CDYAPARRFG--KAGMELFDLRLHERDDVLQ 107 + V + + L + + + Sbjct: 471 TDTVARFGGDEFVVMLETLRPELTEAASQAEIVAEKLLASLNQPFALGGQQHYSTPSIGI 530 Query: 108 AVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALS 167 +F L ++ +F+ + + + L++ Sbjct: 531 TLFGDERLSVDELLKRADLAMYQAKGAGRNTQRFFDPDMQAA-----VNARSNLEADLRQ 585 Query: 168 PTINDHF--AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLK 220 + P+VD + R++ EA+V+ SP+ + G I + Sbjct: 586 GLARGELCVYYQPVVDHRA-RLLGVEALVRWRHPVRGMISPADFIPLAEQTGLILPLGQQ 644 Query: 221 SKALAFTMAHALE----LGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEF 276 A +S+N+ +P V+ +L ++ P ++ +E Sbjct: 645 VLQTACGQLQRWGERKQTRHLSVSVNVSARQF-RQPGFVAEVLQTLQGCGADPRKLKLEL 703 Query: 277 TESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVH 336 TES ++ ++ ++ LK G+ A+D FG G++ L L R D++KI Q + +V Sbjct: 704 TESLLLGDVEDTIARMEQLKREGVGFALDDFGTGYSSLSYLKRLPLDQVKIDQGFVRDVL 763 Query: 337 KSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPS 396 AI++ I+ SL+++V A GV T + +L G E FQG LF + Sbjct: 764 TDPNDAAIVRTILALAQSLDLEVVAEGVETTGQLAFLRLHGCEGFQGYLFGRPGPVEDID 823 Query: 397 IAW 399 Sbjct: 824 AYL 826 >UniRef50_C8SP12 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SP12_9RHIZ Length = 894 Score = 457 bits (1178), Expect = e-127, Method: Composition-based stats. Identities = 68/405 (16%), Positives = 143/405 (35%), Gaps = 38/405 (9%) Query: 20 IEEMVSIANRRNMQSDV-TGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHYN 73 +++ +S A + D ++ + +F + + + +K + + + Sbjct: 480 LQDRLSQAILHAQRYDRWVSVVFIDLDNFKLINDTLGHNAGDRLLKTVAERMVGCISSTD 539 Query: 74 IVELL--------------------CDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKG 113 + L R ++L D + + A + K Sbjct: 540 TIVRLGGDEFVLVLSDQPKNVDLIAETLQKLRTAIAEPLQLGDHCVRATASIGIATYPKD 599 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 + + +R + + ++ +EL + Sbjct: 600 GKAPESLVANADAAMYRAKAVGRDNFQFYAPEFNTRA-HERFLLQEELRTALARS--QFE 656 Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTM 228 + P +D S +I+A EA+++ N + P + G I A Sbjct: 657 LFYQPQIDLRSVQIVAVEALIRWNHPAHGAMAPVGFIPTAEETGLIVPIGDWVLHEACRQ 716 Query: 229 ---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 L L +S+N+ +E + V +++ + + L + +E TES ++ Sbjct: 717 NKAWQDLGLEPITVSVNVSARQF-SEKNLVERVVHALSESDLEGCYLELELTESLIMQDV 775 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 + L++ G+ ++ID FG G++ L L F R+KI + I +V + QA+ Sbjct: 776 GLAVTTMNKLQSLGVQISIDDFGTGYSSLSALKTFPIARLKIDKSFIDDVATNEDDQAVA 835 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 A+I L+++V A GV T E+ +L + QG F+K Sbjct: 836 SAVISLGQKLKMRVIAEGVETDEQVAFLRKNNCDEMQGYHFSKPV 880 >UniRef50_Q2W4Z4 Predicted signal transduction protein containing a membrane domain n=4 Tax=Magnetospirillum RepID=Q2W4Z4_MAGSA Length = 831 Score = 457 bits (1178), Expect = e-127, Method: Composition-based stats. Identities = 68/416 (16%), Positives = 141/416 (33%), Gaps = 44/416 (10%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLE-----GPEEQVKMIYRAICQDPRHY 72 ++E V A R + Q +L + F ++ + ++ +K + + R Sbjct: 414 DRLERAVVHALRHDRQ---AALLFLDLDGFKKVNDTMGHRAGDDLLKEVAVRLRGCVRMT 470 Query: 73 NIVELL---------CDYAPARRFG----------KAGMELFDLRLHERDDVLQAVFDKG 113 + + L + + A A + + + + ++F Sbjct: 471 DTIARLGGDEFTVILDEISAANDASMVADKILASLHAPIFIDGRDVFIGTSIGISLFPID 530 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 + ++ + ++ EL++ Sbjct: 531 GTSGDELLKHADTAMYQAKAAGKGRFNFYSAEMTKREEH-----RLELETALRQAVEEGQ 585 Query: 174 F--AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAF 226 F + P + + R+ FEA+V+ SP + I D+ A Sbjct: 586 FQVHYQPQKNLATNRVSGFEALVRWQHPRLGMISPVDFIPLAEEMHLIDRIDMFVMRQAC 645 Query: 227 T---MAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVIS 283 D +++NL + + D + ++ E + +E TES VI Sbjct: 646 RKGRQWRDQGY-DICMAVNLSGVNFSRD-DLPEQVRQVLEDTGFPAENLELEITESFVID 703 Query: 284 RFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQA 343 + E ++ L+A G+ +AID FG G++ L L R + +KI + + ++ + Sbjct: 704 LEVDQREVLQRLRALGVKLAIDDFGTGYSSLSYLKRLPVNTLKIDRSFVRDIARDSRDMM 763 Query: 344 IIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAW 399 ++ +II SL ++V A G+ ++ L S + QG L AK I Sbjct: 764 LVSSIIGIAHSLGLKVVAEGIEERDQLAILLSQECDEIQGYLIAKPMPAEQAGIFL 819 >UniRef50_A6W3B3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W3B3_MARMS Length = 734 Score = 457 bits (1177), Expect = e-127, Method: Composition-based stats. Identities = 63/429 (14%), Positives = 137/429 (31%), Gaps = 42/429 (9%) Query: 11 IRDDEPVKKIEEMVSIANRRNM---QSDVTGILLFNGSHFFQLLEGP-----EEQVKMIY 62 + + + K+ V++ + + +L + HF + + ++ + + Sbjct: 302 LAHHDSLTKLPNRVALNKTFHKIIKPNTKIALLFIDLDHFKNVNDTLGHSIGDQLLLTVA 361 Query: 63 RAICQDPRHYNIVE------------------LLCDYAPARRFGKAGMELFDLRLHERDD 104 + + V L+ + A + + Sbjct: 362 DRMRTLVNNIGYVARQGGDEFIILLPADNEECLIEKTCAIKEALSARYNIDQHQFFITPS 421 Query: 105 VLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSC 164 + +++ + F Y + + +F + L + Sbjct: 422 IGVSLYPRNGEDFDTLYQRADAAMYHAKHTGRNRYAFFTEEMQAISTRALT-----LGNA 476 Query: 165 ALSPTINDHF--AFHPIVDPLSRRIIAFEAIVQKN-----EDSPSAIAVGQRKDGEIYTA 217 F + P + ++ +II EA+++ + SP ++G+I Sbjct: 477 LHDAIERQEFSLHYQPQISLITGKIIGAEALIRWHSLELGHVSPGEFIPLAEENGQILAI 536 Query: 218 DLKSKA---LAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIV 274 + I++NL D S + + A+ + + + Sbjct: 537 GEWVLRETARQLKQWLEEGITPVRIAVNLSYAQF-QVNDLPSIVEAILNEYAVPAQYLEL 595 Query: 275 EFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITN 334 E TE + ++S + GI +ID FG G++ L L RF ++KI Q + N Sbjct: 596 ELTERIATKDPEHTITILESFQQLGIHTSIDDFGTGYSSLSYLQRFPVYKLKIDQSFVRN 655 Query: 335 VHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGI 394 + + Q I+ II L + A GV T + L + G + QG ++ Sbjct: 656 MTTNTNDQVIVGTIILLAQQLGMTTIAEGVETKAQLEMLYNIGCDDIQGYYISRPIPAEE 715 Query: 395 PSIAWPEKK 403 I + +KK Sbjct: 716 FKIGFLQKK 724 >UniRef50_C9Y8E7 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y8E7_9BURK Length = 633 Score = 456 bits (1175), Expect = e-127, Method: Composition-based stats. Identities = 78/435 (17%), Positives = 157/435 (36%), Gaps = 47/435 (10%) Query: 9 SHIRDDEPVKKIE------EMVSIANRRNMQS-DVTGILLFNGSHFFQLLEGP-----EE 56 +++ + + ++ E+++ A R + ++ +L + +F + + ++ Sbjct: 195 TYLAQHDGLTRLPNRILGNELLTEAMRVAAEEKNLVAMLFVDLDNFKDVNDSLGHSAGDD 254 Query: 57 QVKMIYRAICQDPRHYNIV------------ELLCDYAPARRFGK-------AGMELFDL 97 + + + + + R +IV L + + A +L + Sbjct: 255 FLVQVAQRLRESVRQSDIVCRQGGDEFLIGLTGLQHPDAVAKVSQDILQKMQAPFQLRGI 314 Query: 98 RLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGS 157 + + A++ + + F L + +F S Sbjct: 315 EVLASCSIGIALYPQHGNSFDELMRHADLAMYHAKEAGRNTFRFFSEDIRSS-----VTE 369 Query: 158 DKELDSCALSPTINDHF--AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRK 210 L S + F + P+ D S R++ EA+V+ SP K Sbjct: 370 SLHLISSLRQAVTQEEFVLHYQPVYDLHSGRLLGAEALVRWQNPKLGMVSPGLFITLAEK 429 Query: 211 DGEIYTADLKSKALAFTM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANAL 267 G I A D +S+NL P+ + + + ++ L Sbjct: 430 SGLIVDIGQWVLTEACRQMQAWRQQGATDLFVSVNLSPVQFSR-GNVEAVIAQALRETGL 488 Query: 268 VPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKI 327 P Q+ +E TES +I ++F + ++ +GI ++ID FG G++ L L RF ++KI Sbjct: 489 DPRQLELEVTESTLIHDTEKFITTLGRIQHSGIRMSIDDFGTGYSNLSYLQRFPVHKLKI 548 Query: 328 SQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFA 387 Q + + + A++ AII SL++ V+A GV L G + QG LFA Sbjct: 549 DQSFVRRLMQGQKDVAMVSAIIHLAKSLQLTVTAEGVENEATREALTRMGCDQAQGYLFA 608 Query: 388 KAKLNGIPSIAWPEK 402 + W + Sbjct: 609 RPMPAKDFEAYWLAR 623 >UniRef50_B1M2I6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M2I6_METRJ Length = 819 Score = 456 bits (1174), Expect = e-127, Method: Composition-based stats. Identities = 69/386 (17%), Positives = 134/386 (34%), Gaps = 31/386 (8%) Query: 32 MQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHYNIVELLCDYAPARR 86 + +L + F + + +E ++ + + + L D Sbjct: 410 QRGGACAVLYLDLDGFKSVNDSLGHQAGDELLRRVAAGLRGIAGDGAVARLGGDEFAVLS 469 Query: 87 ----------------FGKAGMELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFR 130 + + R+ V A+ + + + Y L +R Sbjct: 470 DGGAAEAGALAERLIALFDSPFSVGGHRVGVGLSVGIALAPEHGTDAEPLYRRADLALYR 529 Query: 131 TFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPIVDPLSRRIIAF 190 F D +++L T+ + P VD + ++ F Sbjct: 530 AKAEGRGTYRIFTPAM-DEEAEERRVLERDLRQALDDNTLG--LHYQPQVDGHTGALVGF 586 Query: 191 EAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTMAHALELGDKMISINLLP 245 EA+++ SP+ + G I A A +++NL P Sbjct: 587 EALLRWTHPVRGSVSPNLFVPLAEETGLIVALGDWVLREACREAAQW-AQPLKVAVNLSP 645 Query: 246 MTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAID 305 +PD +L + L P+++ +E TES +I+ ++ LK+ GI +++D Sbjct: 646 RQF-QKPDLPETVLAILAETGLSPDRLELEVTESIIINDMARAVGILRRLKSYGIRISMD 704 Query: 306 HFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVA 365 FG G+A L L F D++KI + + + I++A++ SL + V A GV Sbjct: 705 DFGTGYASLATLQAFPFDKLKIDRSFVAQLGTGPQAAVIVRAVLSLGRSLGMGVVAEGVE 764 Query: 366 TPEEWMWLESAGIEMFQGDLFAKAKL 391 T + +L QG LF + + Sbjct: 765 THAQMKFLTEEACGEMQGYLFGRPRP 790 >UniRef50_B4W545 PAS fold family n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4W545_9CYAN Length = 709 Score = 456 bits (1174), Expect = e-127, Method: Composition-based stats. Identities = 73/408 (17%), Positives = 144/408 (35%), Gaps = 40/408 (9%) Query: 17 VKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRH 71 ++++ + +A R Q + +L + F + + ++ + R + + R Sbjct: 293 MERVNHAIKLAKRN--QDYLFAVLFLDLDRFKVVNDSLGHDVGDQLLTATARQLEKCVRT 350 Query: 72 YNIV-------------------ELLCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDK 112 + V + + KA L + + + A+ Sbjct: 351 TDTVAHLSGDEFTILLEDIKDIKDATRVAERIQATLKAPFNLNNHEVFTSASIGIALSST 410 Query: 113 GTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTIND 172 G + + D + +R L + F+ L + + +L Sbjct: 411 GYERSEDILRDADIAMYRAKELGKARHEIFDKIMHARALELLR-LENDLRRALERQE--F 467 Query: 173 HFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFT 227 + PI ++ + FEA+V+ SP+ G I A Sbjct: 468 EVYYQPITSLVTGMLTGFEALVRWRHPELGLVSPAEFIPVAEDTGLIIPLGEWVLHEACR 527 Query: 228 MAHALEL-----GDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVI 282 +S+NL + EPD + + + + L + +E TES ++ Sbjct: 528 QLRMWHTQFPTPEPLKMSVNLSGKQIK-EPDLIEQIDHILAETGLDGSFLKLEITESILM 586 Query: 283 SRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQ 342 + + + L+A I +++D FG G++ L L RF + +KI + ++ ++ Sbjct: 587 ENAETVTKMLLQLRARNIQLSVDDFGTGYSSLSYLHRFPVNTLKIDRSFVSKMNPKNRNT 646 Query: 343 AIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 II+ II SL + V A GV T E+ L+ E QG LF+K Sbjct: 647 EIIRTIITLAHSLRMDVIAEGVETLEQLTELKLLNCEQGQGYLFSKPL 694 >UniRef50_A1SSA6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SSA6_PSYIN Length = 980 Score = 455 bits (1173), Expect = e-126, Method: Composition-based stats. Identities = 72/415 (17%), Positives = 144/415 (34%), Gaps = 38/415 (9%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHY 72 KI + ++A R N ++ + HF + + + + I + + R Sbjct: 569 DKITYLFTLARRNNESLT---MMFLDLDHFKNVNDTLGHVIGDRLLIEIAKRLKSAIREV 625 Query: 73 NIVELLC-----------DYAPARRFG-------KAGMELFDLRLHERDDVLQAVFDKGT 114 ++V + D A L + A++ Sbjct: 626 DLVSRIGSDEFILLFPNTDADSALNIATKLIETVSLPTVFEHHELFITATIGIAIYPNDG 685 Query: 115 SKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF 174 +F+ + + + +F + L + L + H Sbjct: 686 EEFETLIKNADTAMSQAKRYSRNTFHFFTEEMQVH-LQRKLKIVNAMRHALLRNEMQVH- 743 Query: 175 AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTM- 228 + P + + II EA+++ SP G+I A Sbjct: 744 -YQPQISAVKGHIIGAEALLRWRHPELGDISPGEFIPIAESSGQIVAIGEWVLRTAIDQM 802 Query: 229 --AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFD 286 L ++++NL + + + + +++ + L + + +E TE+ + Sbjct: 803 KVWQNEGLAPMVVAVNLSALQFK-QANLIGMIISMLNKAQLAHQYLELELTEAITMDDPQ 861 Query: 287 EFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQ 346 + + L A GI ++ID FG G++ L L +F+ ++KI Q I N+ + +A++ Sbjct: 862 QAINIMNQLHAKGIRMSIDDFGTGYSSLSYLKQFKVYKLKIDQSFICNLARDSDDRAMVH 921 Query: 347 AIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPE 401 AII +L +Q A GV T E+ +L G QG F+KA S + Sbjct: 922 AIIDMAKNLGMQTIAEGVETAEQLEFLRLHGCNEIQGYYFSKAIPADEFSRFAKQ 976 >UniRef50_Q1K210 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K210_DESAC Length = 920 Score = 455 bits (1173), Expect = e-126, Method: Composition-based stats. Identities = 72/415 (17%), Positives = 142/415 (34%), Gaps = 44/415 (10%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHY 72 +++ ++ A R Q+ +LL + F + + + + + + + + R Sbjct: 508 DRLKLAIAKARRHKTQAV---LLLLDLDRFKNINDTLGHAVGDRILTTLAQRMQETLRDT 564 Query: 73 NIVE---------LLCDY----------APARRFGKAGMELFDLRLHERDDVLQAVFDKG 113 + V LL D + + + V +V + Sbjct: 565 DTVARFGGDEFLVLLEDIRELSDVVSLAQKLSDLVSQPVLIDGEEMCLTTSVGISVAPED 624 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 + + +R ++ G +L++ Sbjct: 625 SIEVDQLIRFADTAMYRAKEKGRNNFQFYTPDMNAHA-----GRRLQLENNLRKALQRQE 679 Query: 174 F--AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAF 226 + P V+ S RII EA+++ SP+ + G I + A Sbjct: 680 MVVYYQPQVEMDSGRIIGSEALLRWMHPEHGLISPNDFIPLAEETGVIEEIGAWALEQAC 739 Query: 227 TMAHALE--LGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISR 284 A + + I++NL NE + V + + L + +E TES ++ Sbjct: 740 QQTVAWQKNHPELKIAVNLSARQFRNE-NLVDDIEQILNKTGLAARHLEMELTESLLMED 798 Query: 285 FDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAI 344 D + + L GI++AID FG G++ L L+RF D++KI + + ++ I Sbjct: 799 VDVAIDLMNRLTKLGITLAIDDFGTGYSSLSHLNRFPIDKLKIDRSFVNSMSLDNNG--I 856 Query: 345 IQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAW 399 + II +L + + A GV E+ L G QG F++ + S Sbjct: 857 ARTIITLGRTLGLSIIAEGVENNEQRQLLLQLGCPQAQGYYFSRPVHDNAFSEML 911 >UniRef50_C6AS31 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Rhizobium RepID=C6AS31_RHILS Length = 781 Score = 455 bits (1172), Expect = e-126, Method: Composition-based stats. Identities = 80/415 (19%), Positives = 151/415 (36%), Gaps = 46/415 (11%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEG-----PEEQVKMIYRAICQDPRHY 72 +++ ++ A R N + V I + +F + +G +E +K I + R Sbjct: 370 ERLASILDQARRNNRKVTVAYI---DLDNFKDINDGRGHAAGDEVLKEIATRMANSVRAS 426 Query: 73 NIVELL--------------CDYAPARRFG------KAGMELFDLRLHERDDVLQAVFDK 112 ++V L D RR + D + + A F Sbjct: 427 DMVVRLGGDEFLVVLVHQSSHDAGITRRLRELQKAINRPIRGADGEITITSSIGVAAFPF 486 Query: 113 GTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTIND 172 + + + +R L + E + + + + + D Sbjct: 487 DGATSEELLANADRAMYRAKELGRNTLQHHEGGSTPVGMPLGEHEE------LHQAITGD 540 Query: 173 HFA--FHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSK--- 222 + P VD + RI EA+V+ N + P + G I L Sbjct: 541 QLFLQYQPQVDVATGRITGLEALVRWNHPAKGRVPPVNFIPLAEETGLIVPLGLWVLNEA 600 Query: 223 ALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVI 282 + L I++N+ +PD + + ++ + L + +E TES V+ Sbjct: 601 CRQARQWQDMGLAPLTIAVNVSAKQFA-DPDFATHVAEALERHRLQSRWLELEVTESVVM 659 Query: 283 SRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQ 342 + +++L+ G+ ++ID FG+G++ L L F DR+K+ + L+ + Sbjct: 660 QNAERALAMMETLRGLGVRLSIDDFGSGYSSLAALKTFPFDRLKMDRSLVEALPGDKTAV 719 Query: 343 AIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK-LNGIPS 396 AI A+I +L++ V A GV T + +L A E QG F+K IP+ Sbjct: 720 AIASAVISLAQTLKLSVLAEGVETDAQMDFLRQAHCEEAQGFRFSKPVSPEEIPA 774 >UniRef50_Q1JY96 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JY96_DESAC Length = 904 Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats. Identities = 72/417 (17%), Positives = 138/417 (33%), Gaps = 40/417 (9%) Query: 18 KKIEEMVSIANRRNMQS-DVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRH 71 K + +S+A Q ++ + +F + + ++ ++ I + R Sbjct: 492 KLFHDRLSVAVAHARQHKTKLAVIYLDIDNFKYINDSLGHHYGDKLLQQISERLLSCTRQ 551 Query: 72 YNIVELL------------CDYAPA----RRFGKA---GMELFDLRLHERDDVLQAVFDK 112 + L D RR K L + VF Sbjct: 552 EDTTARLGGDEFIILMPEIEDPHDITVLCRRILKQLELPHALSGRDYTVNVSMGVTVFPD 611 Query: 113 GTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTIND 172 + + + +R F + + + EL++ + Sbjct: 612 DADTPEDLIKNADIAMYRAKEAGKNGYQLFTAAMQQTIMQ-----RIELEARLSDALCRN 666 Query: 173 HFA--FHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALA 225 F + P VD S +I EA+++ + P + G I D A Sbjct: 667 EFVLFYQPQVDLESEHVIGAEALIRWQKPDGQLVYPDEFIPIAEECGLITQIDHWVLKAA 726 Query: 226 FTM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVI 282 + +S+NL + + V + N + L E + +E TE+ V+ Sbjct: 727 CRQANKWREQSGRNFKMSVNLSSEQFAKDQELVQRVKNVLNKTGLPAECLTLEVTENAVM 786 Query: 283 SRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQ 342 S + + L A G+S+AID FG G++ L + F +KI + + ++ Sbjct: 787 SDTESAIAIMTQLTALGVSIAIDDFGTGYSSLSYVKNFPARYLKIDRSFVKDIPGDSDDM 846 Query: 343 AIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAW 399 AI +II +L ++V A GV + +L+ + QG + K S + Sbjct: 847 AIAASIISLGRNLNMEVIAEGVEEQTQIDFLKQHRCQQVQGYFYGKPCAAEFFSQQF 903 >UniRef50_B3PHS3 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHS3_CELJU Length = 856 Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats. Identities = 78/434 (17%), Positives = 146/434 (33%), Gaps = 55/434 (12%) Query: 2 LTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEG-----PEE 56 LT L R ++D ++E ++ R Q+ + +L + F L + + Sbjct: 436 LTQLPNRRLLQD-----RLEHAIATGQR---QAALGALLYIDLDDFKTLNDNRGHHVGDL 487 Query: 57 QVKMIYRAICQDPRHYNIV---------ELLCDYAPARRFG---------------KAGM 92 + + + RH + V +L + R Sbjct: 488 LLIAVADRLRHSLRHEDTVGRLGGDEFLVILEGLSNDRDQAAQQVQQIAEKILQSLNQVY 547 Query: 93 ELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLF 152 L + + +F + + + +F+ + S Sbjct: 548 VLDEQEYFNSPSIGICLFGDDDADIEDLLKRADQAMYHAKAAGRNTLRFFDPHMQASAAQ 607 Query: 153 IADGSDKELDSCALSPTINDHF--AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIA 205 L + + + F + P VD + RI EA+++ SP Sbjct: 608 -----RFALQNEIREALLFNQFKLYYQPQVD-RTGRITGAEALIRWLHPERGMISPMDFI 661 Query: 206 VGQRKDGEIYTADLKSKALAFTMAHALELGDKM----ISINLLPMTLVNEPDAVSFLLNE 261 + G I A + +SIN+ +PD V+ +L Sbjct: 662 PIAEESGLILPLGNWILDAACQQLIHWKQNPLTAALTLSINVSARQF-QQPDFVTQVLAA 720 Query: 262 IKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQ 321 + P Q+ +E TES + + + + +LK+ GI ++D FG G++ L L R Sbjct: 721 VTRTGANPHQLTLELTESILATNQQDIITKMDALKSHGIKFSLDDFGTGYSSLSYLKRLP 780 Query: 322 PDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMF 381 + +KI + + ++ AI + +I+ S+E+ V A GV T + WLE G + Sbjct: 781 INELKIDKSFVNDILTDPNDAAIARMVIRLAQSMELNVIAEGVETQRQRDWLEQEGCLHY 840 Query: 382 QGDLFAKAKLNGIP 395 QG F K Sbjct: 841 QGYYFGKPVGAEEF 854 >UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RK65_9PROT Length = 1327 Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats. Identities = 62/406 (15%), Positives = 134/406 (33%), Gaps = 39/406 (9%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHY 72 ++ + + A+R V + F + + + + + + + R Sbjct: 918 DRLHKALQRAHRDETGLAV---FFIDLDRFKNINDTLGHQVGDRVLCEVAWRLGRLMRES 974 Query: 73 NIVELL-------------------CDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKG 113 + V L +A + + +VF + Sbjct: 975 DTVGRLGGDEFLIVIEDVGEPTAVSHIAEKILNVLQASPVTVEHEFFVGASIGISVFPQD 1034 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 + + + + +R +F + L + +L + + Sbjct: 1035 GADAETLMKNADVAMYRAKERGRNTYEFFTKDLTQTSL-ARLQMETDLRRAIERGELRVY 1093 Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTM 228 P + +++ EA+V+ P + G I + A Sbjct: 1094 L--QPQFSLATGKVVGAEALVRWLRPQQGLVLPGEFIKLAEESGLIVPIGEWVQGTAACQ 1151 Query: 229 AHAL---ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 L ++S+N+ + ++ + L + +E TES ++S Sbjct: 1152 WATWVAAGLAPGVLSVNVSGVEFAR-GRIQQTARRTLELSGLPARFLELEITESAIMSHA 1210 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 + + + +L+A GIS+ ID FG G++ L L R +++K+ Q + + AI Sbjct: 1211 ENSVQVLDNLRAMGISLVIDDFGTGYSSLAYLKRLPLNKLKVDQSFVRGLPNDTEDCAIA 1270 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 +A+I SL++ V A GV T + +L G + QG L + Sbjct: 1271 RAVIALGHSLQLTVIAEGVETEAQREFLTGEGCDEMQGYLRGRPMP 1316 >UniRef50_Q31GA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31GA6_THICR Length = 815 Score = 454 bits (1170), Expect = e-126, Method: Composition-based stats. Identities = 63/415 (15%), Positives = 143/415 (34%), Gaps = 44/415 (10%) Query: 20 IEEMVSIANRRNMQS-DVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHYN 73 +++ + +S V ++ + F L + ++ ++ + + ++ R ++ Sbjct: 400 LQDRLQQEMAVTERSKHVCALMFIDLDDFKTLNDTLGHDTGDKLLRQVATRLRENVREFD 459 Query: 74 IVELL----------------------CDYAPAR--RFGKAGMELFDLRLHERDDVLQAV 109 V + + + R L H + + Sbjct: 460 TVARIGGDEFVLILPSLDDDWKDAATHAELVAQKVLRVLNKPYLLDSTPYHSTPSIGVKL 519 Query: 110 FDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPT 169 F + L ++ +++ ++ + + + Sbjct: 520 FSGHQETLEELLKHADLAMYQAKAKGRNTVRFYDTTMQE-VVNAKSVMEASMRQAITGQQ 578 Query: 170 INDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKAL 224 + P ++ + +II EA+V+ P+ ++G I + Sbjct: 579 FV--LFYQPQIN-SNGQIIGAEALVRWRHPQKGLIAPNKFIPLAEENGFILSIGRWVLQT 635 Query: 225 AFTMAHALELGD----KMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESE 280 A +++N+ ++ D V + I P+ + +E TES Sbjct: 636 ACEQLVEWARQPATAQITMAVNVSARQF-HQIDLVEEVERIICQTGANPQLLKLELTESL 694 Query: 281 VISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGP 340 ++ ++ + +++LK G+S ++D FG G++ L L R D++KI Q + ++ Sbjct: 695 LVKDIEDVVDKMQALKKLGVSFSLDDFGTGYSSLAYLKRLPLDQLKIDQTFVRDIIDDSN 754 Query: 341 RQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIP 395 AI +A+I S+E V A GV E+ L G +FQG LF + Sbjct: 755 DAAIARAVIALAKSMEFNVIAEGVENIEQHQMLIDMGCRVFQGYLFGRPVPIEEF 809 >UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=cellular organisms RepID=B3E661_GEOLS Length = 1027 Score = 454 bits (1170), Expect = e-126, Method: Composition-based stats. Identities = 64/420 (15%), Positives = 151/420 (35%), Gaps = 44/420 (10%) Query: 10 HIRDDEPVKKI------EEMVSIANRRNMQSDV-TGILLFNGSHFFQLLEG-----PEEQ 57 H+ +P+ + ++ + +A RR+ + ++ + F + + + Sbjct: 597 HLAYFDPLTDLPNRRMLQDRLELALRRSRRHGSNVALMYLDLDSFKHVNDSMGHPAGDLL 656 Query: 58 VKMIYRAICQDPRHYNIV---------ELLCDYAPARR----------FGKAGMELFDLR 98 +K + R ++V +L D + + L Sbjct: 657 LKEMAGRFSGVVRDDDVVCRLGGDEFALILHDIHQDQDVVPIAQKLIEAVAQPVPLDGRE 716 Query: 99 LHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSD 158 + + A+F + + + + ++ +S + + Sbjct: 717 VVVTASIGIALFPRDGGDVKNLEKHADIALYHAKEEGKNTFRFYLEEL-NSTISTRIALE 775 Query: 159 KELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGE 213 + L + + P V S ++ EA+++ + SP + Sbjct: 776 QGLRYAKERQEL--ELHYQPKVCVASGKVSGVEALLRWHSPDFGLVSPIRFIPLAEQTRL 833 Query: 214 IYTADLKSKALAF---TMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPE 270 I A L +++NL + L + P V + I + PE Sbjct: 834 IIPIGEWVLRTACLQQVQWREQGL-LLNMAVNLSAIQLKS-PGLVERVAAIIDETGIQPE 891 Query: 271 QIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQE 330 + +E TES +++ DE + ++ L+ G S++ID FG G++ L L F +KI + Sbjct: 892 HLELELTESALVNNPDEVVQLLERLRTLGCSISIDDFGTGYSSLSYLKSFPVTILKIDRS 951 Query: 331 LITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 + ++ + +AI ++++ +L+++ A GV + E+ L+ G QG ++++ Sbjct: 952 FVRDLAHNSGDRAIARSVVDLANNLDMKTVAEGVESEEQLTILQQIGCTYIQGFIYSRPV 1011 >UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6Y2_9PROT Length = 814 Score = 454 bits (1170), Expect = e-126, Method: Composition-based stats. Identities = 66/418 (15%), Positives = 138/418 (33%), Gaps = 43/418 (10%) Query: 20 IEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHYNI 74 ++ + +L + +F L + + ++ + + + R + Sbjct: 396 LDRLQHALASSARSGREGALLFIDLDNFKALNDTLGHDMGDLLLRQVAQRLASCVREGDS 455 Query: 75 VELL--------------CDYAPARRFGKAG----------MELFDLRLHERDDVLQAVF 110 + L D A + G +L + +F Sbjct: 456 IARLGGDEFVVMLEDLGGHDLEAAAQTEAVGEKILAMLGLPYQLVAHEYRCTPSIGATLF 515 Query: 111 DKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTI 170 + + ++ +F+ +D + + EL Sbjct: 516 SGHELAKEELLKRADIAMYQAKQAGRNTVRFFDQQMQD-AVTARVALEGELHKALDRQQF 574 Query: 171 NDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALA 225 + VD S R + EA+++ P + I A Sbjct: 575 R--LHYQIQVD-ASGRPLGAEALIRWMHPERGLVPPDQFIGMAEETDLILPIGQWVMDTA 631 Query: 226 FTMAHALE----LGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEV 281 + D ++++N+ ++ D V + ++ +A+ P+ + +E TES + Sbjct: 632 CAQLKTWQQHAPTRDLVLAVNVSATQF-HQLDFVFQVRATVQRHAIDPKLLKLELTESML 690 Query: 282 ISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPR 341 + ++ + +LK G+ ++D FG G++ L L R D+IKI Q + ++ Sbjct: 691 LENIEDTIRTMNALKEIGVQFSLDDFGTGYSSLQYLKRLPLDQIKIDQSFVRDIASDSND 750 Query: 342 QAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAW 399 + I+ II +L + V A GV T E+ +L+ G FQG LF K Sbjct: 751 REIVGTIIAMAQNLYLDVIAEGVETEEQRQFLQDNGCTHFQGYLFGKPVPVEQFEAML 808 >UniRef50_B2UJ08 Diguanylate cyclase/phosphodiesterase n=5 Tax=Ralstonia RepID=B2UJ08_RALPJ Length = 670 Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats. Identities = 86/454 (18%), Positives = 160/454 (35%), Gaps = 63/454 (13%) Query: 5 LIYRSHIRDDEPVKK---IEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EE 56 L Y +HI + E + ++ +R Q+ G+LL + +F + + + Sbjct: 195 LDYLAHIDSVTELPNRHAFNERLQVSLKRAGQTGAVGLLLLDLDNFKVVNDTLGHNNGDR 254 Query: 57 QVKMIYRAICQDPRHYNI----------------------------VELLCDYAPARRFG 88 ++ + R + N+ L D R Sbjct: 255 LLRQVARRLNDVIEQANLRAVLCRIGGDEFAVIAELSGRAQIAETEAATLADGLAKRILA 314 Query: 89 K--AGMELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPA 146 A L +++ V +++ Q+ + + + F Sbjct: 315 ALGAPFSLDLHQIYVTASVGVSLYPHDARDVQVLTRNADTAMYHAKNHGKNAAASFTSEM 374 Query: 147 EDSWLFIADGSDKELDSCALSPTINDHFAFHPIVDPLSR----------RIIAFEAIVQK 196 + + +L + A+ P V + + EA+V+ Sbjct: 375 DQQAR-RRLRVEADLRRALDREELL--LAYQPQVRLSTDDAHDAVISRANVYGVEALVRW 431 Query: 197 NEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTMAHALELGD---KMISINLLPMTL 248 P + G I L A A D +++NL Sbjct: 432 RHPEIGLIGPGEFIAVAEETGLIVPLGLWVLRTACQQAVRWMREDGVTLRVAVNLSARQ- 490 Query: 249 VNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFG 308 +P V +++ ++ + P Q+ +E TES ++ + ++SL AAGIS++ID FG Sbjct: 491 TRDPALVENVMDVLRETGMPPHQLELEITESVLMEDIEANIALLESLHAAGISLSIDDFG 550 Query: 309 AGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPE 368 G++ L L RF ++KI + + + G AI A+I SL +QV A GV PE Sbjct: 551 TGYSSLAYLQRFPIQKLKIDRSFVQRMPGDGE--AIAGAVIAMAHSLRMQVVAEGVEDPE 608 Query: 369 EWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEK 402 + L AG ++ QG LF++ + +AW + Sbjct: 609 QLALLRDAGCDLGQGYLFSRPQ-QADALMAWLNR 641 >UniRef50_B6BGL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGL3_9PROT Length = 671 Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats. Identities = 64/394 (16%), Positives = 145/394 (36%), Gaps = 40/394 (10%) Query: 31 NMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHYNIV---------- 75 N + ++ + +F + + + ++ + + + + + Y+++ Sbjct: 270 NKNKNNFALIFMDLDNFKTINDSLGHTLGDMLLQKVAKRLKNEIKEYDMLSRFGGDEFVF 329 Query: 76 ---------ELLCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRAL 126 + K L ++ + A++ +L + + Sbjct: 330 LFSNVQSELTIEKTMIKIHEVLKKPFILNTYEVYTTASIGIAIYPDDAQDAELLLRNADV 389 Query: 127 QFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFA--FHPIVDPLS 184 + + ++F + + L+S N+ F P V + Sbjct: 390 AMYDAKQSGRSKYSFFNADMLN-----LSSNRLMLESELHKALENNELFLLFQPQVSLWN 444 Query: 185 RRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKS---KALAFTMAHALELGD 236 +I+ EA+++ SP G I + + + Sbjct: 445 EKIVGVEALIRWQHPTKGLISPLDFIPIAENSGLIMPIGEWIIDQACDQLALWKDTHMSE 504 Query: 237 KMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLK 296 +SIN+ ++++ D S++ I+ + + +E TES ++ +E + LK Sbjct: 505 ATLSINVSAKQVLHQ-DLYSYIEAAIERTKIDGRFLELEITESVIMENINETVRILSRLK 563 Query: 297 AAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLE 356 G+S+AID FG G++ L L + D++KI +E I ++ AI AII SL Sbjct: 564 KLGVSIAIDDFGTGYSSLSYLKKLPIDKLKIDREFIKDIPNDKDDIAITNAIISMSKSLS 623 Query: 357 IQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 +++ A G T E +L+++ ++ QG ++K Sbjct: 624 LKIVAEGPETKEHIEFLQNSKCDIAQGFYYSKPI 657 >UniRef50_D1C8G6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C8G6_SPHTD Length = 760 Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats. Identities = 74/417 (17%), Positives = 143/417 (34%), Gaps = 45/417 (10%) Query: 19 KIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHYN 73 ++ + ++ A R +L + +F + + + + + + + R + Sbjct: 338 RLADSLAQAARE---RTRVALLFIDLDNFKLINDSLGHDAGDRVLSELGKRLLGCIRCGD 394 Query: 74 IVEL-------------------LCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKGT 114 + L + L + A+ Sbjct: 395 MAARFGGDEFMVLINGTPGTDAALAAADRLAATLAEPFVVDGHELVITTSIGVALGGDPD 454 Query: 115 SKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF 174 + + + R +L + F+ + L+ F Sbjct: 455 DRPEDLIRNADAAMHRAKLLGKARRVVFDPAMYAQAV-----ERLALERDLRHGLERGEF 509 Query: 175 --AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFT 227 + P++D +RR + EA+V+ + SP + G I A A Sbjct: 510 QIYYQPVLDVRTRRPVEVEALVRWHHPERGLISPGEFIPIAEETGLIVPLGHWVLAEACR 569 Query: 228 MAHALELG-----DKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVI 282 A +S+NL P + + + L P + +E TES ++ Sbjct: 570 QLAAWRTAFPDCAPSAVSVNLSARQF-RHPSLTADIAQILAETGLPPASLKLEITESVMM 628 Query: 283 SRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQ 342 EA++ LK G+ +A+D FG G++ L L RF D +KI + + +S Q Sbjct: 629 DDTASTLEALRDLKQLGVQLAVDDFGTGYSSLSYLKRFPTDAMKIDRSFARGLDQSREDQ 688 Query: 343 AIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAW 399 A+++A+I +L +QV+ GV T E+ +LE G ++ QG LFA + Sbjct: 689 ALVEAMIAAANALRLQVTVEGVETEEQLEFLERVGCDLVQGFLFAPPMPPDEVARFL 745 >UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RS22_9PROT Length = 1006 Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats. Identities = 71/393 (18%), Positives = 139/393 (35%), Gaps = 27/393 (6%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGPEEQVKMIYRAICQDPRHYNIVEL 77 ++ + V +++ T + G F +LE E+ + I++L Sbjct: 632 DRLLQQVGQRLSSSVREGDT-VARLGGDEFVVMLENLGERPEEAAG--QSRIVGEKIIKL 688 Query: 78 LCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATE 137 L +L H V +F L + Sbjct: 689 L----------NRPYDLSGHDYHNTPSVGITLFGGQQVGIDELMKRADLAMYEAKASGRN 738 Query: 138 QSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKN 197 +F+ + + + +K+L + + A+ P VD S ++I EA+++ Sbjct: 739 ALRFFDPRMQ-AVVTARADIEKDLRAAVGRQ--SFFLAYQPQVD-ASGQVIGAEALLRWQ 794 Query: 198 E-----DSPSAIAVGQRKDGEIYTADLKSKALAFTMAH----ALELGDKMISINLLPMTL 248 SP+ + G I L A A +S+N+ Sbjct: 795 HQQRGTVSPAEFIPVAEETGLILPLGLWVLETACAQAALWAARPGRERFTVSVNVSARQF 854 Query: 249 VNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFG 308 + + V +L + + P + +E TES ++ + + +LKA G+ ++D FG Sbjct: 855 -RQANFVDQVLAVLARSGAHPRNLKLELTESMLLDNVQDIIAKMSALKARGVGFSLDDFG 913 Query: 309 AGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPE 368 G++ L L + D++KI Q + ++ + I + II +L + V A GV + E Sbjct: 914 TGYSSLSYLKQLPLDQLKIDQSFVRDLLTDPNDEVIARTIIALARTLGLSVIAEGVESVE 973 Query: 369 EWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPE 401 + L + G +QG LF++ Sbjct: 974 QQDALAAQGCLAYQGYLFSRPLALADFEAFLRR 1006 >UniRef50_B8HRI7 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HRI7_CYAP4 Length = 744 Score = 454 bits (1168), Expect = e-126, Method: Composition-based stats. Identities = 75/425 (17%), Positives = 142/425 (33%), Gaps = 48/425 (11%) Query: 17 VKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRH 71 + ++ +++ A RR + + F + + +E +K I R + R Sbjct: 295 MNRLTKVLERAGRRQDFH--YAVFFLDLDRFKVVNDSLGHLLGDEFLKAIARRLSSCLRE 352 Query: 72 YNIVELL-------------------CDYAPARRFGKAGMELFDLRLHERDDVLQAVFDK 112 ++V L +R A L L + A+ Sbjct: 353 EDMVARLGGDEFAILLEELSNPDIVHRIAERLQRVLSAPFTLKQHELFTTASIGIALGTS 412 Query: 113 GTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTIND 172 + + D + ++ + F+ + +L+S Sbjct: 413 YYEQPEAILRDADIAMYQAKTQGKARHIIFDQAMHTRAVK-----RWQLESDLRWAIERR 467 Query: 173 HF--AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSK--- 222 F + PIV + R+I FEA+V+ + SP+ + G I Sbjct: 468 EFCLVYQPIVSIQTERLIGFEALVRWHHPQRGWISPAEFISVAEETGLIIPLGHWVLWEG 527 Query: 223 ALAFTMAHAL------ELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEF 276 + +S+NL +PD + ++ ++ + + +E Sbjct: 528 CRQLRQWQSQFNLSPTAEPPLTVSVNLSSKQFC-QPDLIHYIQQVLQQTGMEGTCLKLEL 586 Query: 277 TESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVH 336 TES ++ + LK GI +A+D FG G++ L L RF D +KI + I + Sbjct: 587 TESILMENLSTATSLLVQLKELGIQLALDDFGTGYSSLSYLHRFPLDVLKIDRSFINGIE 646 Query: 337 KSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPS 396 I++ I+ SL +QV A GV T + L++ QG L ++ Sbjct: 647 AETENLEIVRTILSLARSLNLQVVAEGVETQAQLDHLQALQCGYAQGYLISRPLTPEKTE 706 Query: 397 IAWPE 401 E Sbjct: 707 QFLQE 711 >UniRef50_B5ED91 Diguanylate cyclase/phosphodiesterase n=3 Tax=Geobacter RepID=B5ED91_GEOBB Length = 742 Score = 454 bits (1168), Expect = e-126, Method: Composition-based stats. Identities = 72/433 (16%), Positives = 150/433 (34%), Gaps = 36/433 (8%) Query: 2 LTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDV-TGILLFNGSHFFQLLEGP-----E 55 L L Y + + + + + A + V L + + F + + + Sbjct: 296 LERLAYYDSLTGLLNRRMLLDRMEQAIGTAQREGVKVATLFMDLNGFKVINDTLGHKAGD 355 Query: 56 EQVKMIYRAICQDPRHYNIVELL---------------CDYAPARRFGKAGMELF---DL 97 + + + + + + R + + L A A+ A ++ D Sbjct: 356 QILVEVAKRLQKMVRKRDTLARLGGDEFVVAATFEKDENASAIAKNLINAITPVYQVCDR 415 Query: 98 RLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGS 157 ++ V ++F + + + + ++ + L Sbjct: 416 EVYVGVSVGISIFPDDGDVPETLLKNADIAMYNAKSQGQGGFCFYSAQLNER-LHERMQL 474 Query: 158 DKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDG 212 + +L + PI+D + RI A EA+++ N+ P + G Sbjct: 475 EFKLRGAVER--EEFFLEYQPILDSKTGRITAVEALLRWNDPEKGRVMPDSFIPLAEDTG 532 Query: 213 EIYTADLKSKALAF---TMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVP 269 I A + +++N+ + D + + + + + P Sbjct: 533 VILPLGEWVLRTACAKLRQWQDAGVMPVRMAVNISGRQFT-QGDLSKTVEDALLQSGVHP 591 Query: 270 EQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQ 329 + +E TE+ +I +E + LK +S++ID FG G++ L L F D +KI + Sbjct: 592 SWLELELTETCLIKNVEETVRKLCRLKGLCVSISIDDFGTGYSSLQYLKNFPIDHLKIDR 651 Query: 330 ELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 I NV + +AI+ AII ++++ V A GV T ++ L G + FQG F + Sbjct: 652 GFINNVCELPDDRAIVDAIIGIAKAMDLHVIAEGVETRQQAEHLMRRGCDEFQGYYFYRP 711 Query: 390 KLNGIPSIAWPEK 402 K Sbjct: 712 LPEEKLLEVLASK 724 >UniRef50_Q07PV4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodopseudomonas palustris BisA53 RepID=Q07PV4_RHOP5 Length = 928 Score = 454 bits (1168), Expect = e-126, Method: Composition-based stats. Identities = 64/431 (14%), Positives = 141/431 (32%), Gaps = 48/431 (11%) Query: 9 SHIRDDEPVKKI------EEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQ 57 +H+ + + + E + A D + + F + + +E Sbjct: 497 AHMAHYDALTDLPNRVLFHERLESALDAREPDDQLAVFYIDIDQFKSVNDSLGHSIGDEL 556 Query: 58 VKMIYRAICQDPRHYNIVELL-----------------------CDYAPARRFGKAGMEL 94 +K++ + + + YA R+ + Sbjct: 557 LKIVADRLRGCLAATDFAARIGGDEFAIIQTAVAKATDTTDLVERIYAAIRK----PYDC 612 Query: 95 FDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIA 154 L + A+ + + + L + +FE E + + Sbjct: 613 AGHLLTADASIGIALAPQHGANLDQLLKNADLAMYGAKAEGRRTYRFFEPAMEARVIALR 672 Query: 155 DGSDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQR 209 + +L + P + ++ EA+++ SP+ Sbjct: 673 -TMEIDLRQAIADG--GFEIYYQPQLRLCDDKVTGCEALLRWRHPVRGMISPAEFIPVAE 729 Query: 210 KDGEIYTADLKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVP 269 + G I + A GD +S+N+ P+ +E + + + L Sbjct: 730 ETGLINQLGEWVLVESCAEAVKWP-GDVKVSVNVSPVQFGSEG-FALKVAAALANSGLPA 787 Query: 270 EQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQ 329 ++ +E TE+ +I + + ++A G+ +A+D FG G++ L L RF D+IKI + Sbjct: 788 HRLELEITEAVLIRDDEAALTMLHQIRALGVGIALDDFGTGYSSLSYLRRFPFDKIKIDR 847 Query: 330 ELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKA 389 I N+ + I++A++ + + +A GV T + L G QG L++ Sbjct: 848 SFIKNIEDANGSAHIVKAVVDIAAAQRMTTTAEGVETEGQLNELRRLGCSEMQGYLYSPP 907 Query: 390 KLNGIPSIAWP 400 + Sbjct: 908 VPASKLAALLL 918 >UniRef50_Q89WT2 Bll0596 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89WT2_BRAJA Length = 833 Score = 454 bits (1168), Expect = e-126, Method: Composition-based stats. Identities = 66/428 (15%), Positives = 149/428 (34%), Gaps = 42/428 (9%) Query: 9 SHIRDDEPVKKIEEMVSIANRRNMQSDVT-------GILLFNGSHFFQLLEGP-----EE 56 +H+ + + + V + R VT +L+ + F ++ + + Sbjct: 400 AHMAQHDALTDLPNRVLLRERMEHAIAVTRNGGLDLAVLMLDLDRFKEVNDTLGHPTGDS 459 Query: 57 QVKMIYRAICQDPRHYNI-------------------VELLCDYAPARRFGKAGMELFDL 97 ++ + + + + VE R+ +L D Sbjct: 460 LLRAVATRLRECTTETALIARLGGDEFAVIDYVTNPAVEAAALAENIRKALCEPFDLGDH 519 Query: 98 RLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGS 157 R+ + A+ + + + L + +FE D + Sbjct: 520 RVTVGTSIGIAIAPRDGNDSDVIMKSADLALYSAKSGGRGAFRFFEPEL-DELMHARRNL 578 Query: 158 DKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDG 212 ++++ + + P V P + ++ FEA+++ + PS + G Sbjct: 579 ERDMRDAIVG--RQFELHYQPFVSPATGKVNGFEALLRWHHPQQGLVMPSEFIPLAEETG 636 Query: 213 EIYTADLKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQI 272 I A A I++NL P + V ++ + ++ + P ++ Sbjct: 637 LIVPLGEWVLRAACAEAAKWP-PHVRIAVNLSPAQF-RSKELVPVVIGALASSGVAPHRL 694 Query: 273 IVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELI 332 +E TE+ ++ + + L+ G+ +A+D FG G++ L L +F D+IKI + + Sbjct: 695 ELEVTETVIMHDSEAVFAVLGQLRELGVRIALDDFGTGYSSLSFLQKFPFDKIKIDRSFV 754 Query: 333 TNVHK-SGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 + + + +A+++ SL +A GV T E+ L G QG F++ Sbjct: 755 NELSSARAEARHLARAVVRFAVSLGKTTTAEGVETKEQLDILCEEGCLETQGYYFSRPMP 814 Query: 392 NGIPSIAW 399 + Sbjct: 815 ASDIARML 822 >UniRef50_Q5P8Z7 Sensory box/GGDEF family protein n=3 Tax=cellular organisms RepID=Q5P8Z7_AZOSE Length = 1008 Score = 454 bits (1168), Expect = e-126, Method: Composition-based stats. Identities = 69/402 (17%), Positives = 142/402 (35%), Gaps = 40/402 (9%) Query: 32 MQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHYNIVELL-------- 78 +L + HF + + + ++ + + + R + V L Sbjct: 571 RAHAKVALLFVDLDHFKTINDTLGHPVGDGLLQGVALRLRECLRETDTVSRLGGDEFLIA 630 Query: 79 ----CDYAPARRF-------GKAGMELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQ 127 D EL L + A++ F + Sbjct: 631 LTDIRDPQAINSATAKIFDTLTRPFELEGHELTNTMSIGIAIWPDDGEDFDTLLKNADTA 690 Query: 128 FFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHF--AFHPIVDPLSR 185 ++ ++ + + +L + S ND F + P ++ S Sbjct: 691 MYQAKRAGRNTWRFYTEQMNANAVEQL-----QLRTALHSALENDEFLLHYQPQINLASG 745 Query: 186 RIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTMAHAL---ELGDK 237 ++ EA+++ + D P + G I A A L + Sbjct: 746 HVVGVEALLRWHWDKRELVPPDRFIPAAEESGLIVPIGDWVLREACMQAVRWTRQGLPEL 805 Query: 238 MISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKA 297 I++NL + D ++ + + L P ++ +E TES ++ + E ++ LK+ Sbjct: 806 TIAVNLSAVQF-RRGDLERSVVRALSLSGLDPARLELELTESLLLVDTESVIETLRRLKS 864 Query: 298 AGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEI 357 G+ ++ID FG G++ L L RF D++KI Q + ++ AI++AI+ +L++ Sbjct: 865 LGVRLSIDDFGTGYSSLAYLKRFAVDKLKIDQSFVRDIATDPDDAAIVRAIVSMAHTLKL 924 Query: 358 QVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAW 399 QV A GV + + +L + QG +A+ + Sbjct: 925 QVIAEGVESEDIDRFLHIFNCDEAQGYHYARPMPGDALAEWL 966 >UniRef50_C5V5K2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5K2_9PROT Length = 925 Score = 453 bits (1167), Expect = e-126, Method: Composition-based stats. Identities = 67/419 (15%), Positives = 142/419 (33%), Gaps = 44/419 (10%) Query: 20 IEEMVSIANRRNMQSDVTGILLF-NGSHFFQLLEGP-----EEQVKMIYRAICQDPRHYN 73 + + ++ A +++ G LLF + F L + + +K + + R + Sbjct: 502 LLDRLNYALASGLRTGKNGALLFIDLDKFKTLNDTLGHDIGDLLLKQVAHRLKACVREID 561 Query: 74 IVELLC----------------------DYAPARRFG--KAGMELFDLRLHERDDVLQAV 109 V + + + + +L H + ++ Sbjct: 562 TVARIGGDEFVVMLEDLNIESVEAAAQTEVIGEKILAALRMPYQLLTNEFHSSVSIGISL 621 Query: 110 FDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPT 169 F + ++ + +F+ +D+ + + EL Sbjct: 622 FSNNGQSQDEPLKQADIAMYQAKKSGRNKLRFFDQRMQDT-ISSRANLEAELRKAL--AN 678 Query: 170 INDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKAL 224 + VD + I E +++ SP+ + G I L Sbjct: 679 EQLQLHYQIQVDSA-HQTIGAEVLLRWIHPVNGIISPAQFVPVAEETGLILPIGLWVLET 737 Query: 225 AFTMAHALELGD----KMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESE 280 A + +++IN+ ++ + + + I+ + + P + +E TE Sbjct: 738 ACAQLKKWQDNPATAQLILAINVSARQF-HQNGFATEVRSVIERHDINPALLKLELTEGM 796 Query: 281 VISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGP 340 +++ D+ ++SL+ G+ ++D FG G++ L L R ++KI Q + ++ Sbjct: 797 LLNNLDDTIATMRSLQEFGVQFSLDDFGTGYSSLQYLKRLPLAQLKIDQSFVRDLATGYN 856 Query: 341 RQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAW 399 QAI++ II SL + V A GV T + L FQG LF K Sbjct: 857 DQAIVRTIIAMAHSLNLNVIAEGVETEIQRQILLKNQCSHFQGYLFGKPMPIEQFESLL 915 >UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H3Y9_METFK Length = 858 Score = 453 bits (1167), Expect = e-126, Method: Composition-based stats. Identities = 68/417 (16%), Positives = 134/417 (32%), Gaps = 39/417 (9%) Query: 11 IRDDEPVKKIEEMVSI---ANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIY 62 + + + + +S+ R G+++ + +F + + ++ + + Sbjct: 429 LAHTDTLTGLPNRMSLYSGLEERLANVQPIGVMILDLDNFKIINDTLGHHVGDQLLVEVA 488 Query: 63 RAICQDPRHYNIVELL-------------------CDYAPARRFGKAGMELFDLRLHERD 103 R + +V L + + LH Sbjct: 489 RRLVCCVGEQGMVARLGGDEFVIVLDCPQATQIVGRVAKEVLQRLAQPYLIEGYELHSSS 548 Query: 104 DVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDS 163 + V S + + +F + + + L Sbjct: 549 SIGIGVSPHDGSDPYSLLKNIDTAMYAAKSSGKNNFKFFTEKMREQ-INERMQMENHLRQ 607 Query: 164 CALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTAD 218 L + P VD + RII EA+V+ N P + + Sbjct: 608 AILRNE--FELHYQPQVDLGTGRIIGMEALVRWNHPEWGMVHPEKFIRVAEECNLVIPLG 665 Query: 219 LKSKALAFTM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVE 275 A L IS+N+ L + + + N + + + P + +E Sbjct: 666 EWVLCEACRQISQWSRQGLEAVCISVNISARQLKSRY-LFTLIDNLMMTHQIKPGMLELE 724 Query: 276 FTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNV 335 TES V+ ++ +K LK G+++AID FG G++ L L R+KI + + ++ Sbjct: 725 ITESAVMDDPEQTIPRMKELKNKGVALAIDDFGTGYSSLSYLKLLPLTRLKIDRSFVKDI 784 Query: 336 HKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLN 392 AI A I +L + + A GV T + +L + G + QG F+K Sbjct: 785 ETDPNDAAICAATIALARTLGLGLVAEGVETEAQLEYLRAQGCDSAQGYYFSKPLPA 841 >UniRef50_C5V4D4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionella ferruginea ES-2 RepID=C5V4D4_9PROT Length = 925 Score = 453 bits (1167), Expect = e-126, Method: Composition-based stats. Identities = 64/433 (14%), Positives = 146/433 (33%), Gaps = 38/433 (8%) Query: 2 LTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSD-VTGILLFNGSHFFQLLEGP-----E 55 + L Y + + +++ +S A ++ D ++ + HF + + + Sbjct: 495 IEHLAYHDQLTGLPNRRLLKDRLSQAVSSVVRRDAKLALMYLDLDHFKDVNDSLGHGAGD 554 Query: 56 EQVKMIYRAICQDPRHYNIVELL-------------------CDYAPARRFGKAGMELFD 96 ++++ + R + + + M + + Sbjct: 555 VLLQIVAERLQGCVRADDTLARMGGDEFVLLLNGVNGADDVASIAGKIIHELSQPMRIGN 614 Query: 97 LRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADG 156 L + ++ + + ++ ++ D + Sbjct: 615 DELRITPSLGISMCPQDGRDADDLLKYADVALYQAKQQGRATYRFYTQALHDQSV-ERVQ 673 Query: 157 SDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKD 211 ++ L + P VD RII EA+++ N SP+ + Sbjct: 674 LERLLRHALERNE--FELYYQPQVDLCDGRIIGCEALIRWNHPGMGQVSPARFIPIAEQS 731 Query: 212 GEIYTADLKS---KALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALV 268 G I H D +S N+ + + + L + + + + Sbjct: 732 GLIIDIGNWVMKQACHQAKRWHDQGW-DIKVSFNVSARQFMRSGELMQSLRDALAESGVD 790 Query: 269 PEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKIS 328 P ++ VE TES ++ E + ++A GI +A+D FG G++ L L RF +KI Sbjct: 791 PTRMEVELTESLLL-DPQGMGEILHEIRALGIQLALDDFGTGYSSLSYLRRFPISILKID 849 Query: 329 QELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAK 388 + ++ + +++ II +L + + A G+ T + LE+ G E+ QG ++ Sbjct: 850 RSFVSAADNNADDAEMVKTIIGMAHNLRMSLIAEGIETNAQRDMLETQGCEVGQGYHYSC 909 Query: 389 AKLNGIPSIAWPE 401 S+ + Sbjct: 910 PVPATEFSLLLQQ 922 >UniRef50_A4TX60 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TX60_9PROT Length = 961 Score = 453 bits (1167), Expect = e-126, Method: Composition-based stats. Identities = 71/415 (17%), Positives = 140/415 (33%), Gaps = 38/415 (9%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHY 72 +++ +++A R + ++ + F + + + +K + + Q R Sbjct: 550 DRVDRAIALAEREGRRV---ALMFLDLDQFKTVNDSLGHAAGDRLLKDVAWRLRQCVRES 606 Query: 73 NIVELL------------CDYAPARRFGKA-------GMELFDLRLHERDDVLQAVFDKG 113 + + L D + + + + + A+F + Sbjct: 607 DTIARLGGDEFVIVLNAVRDADGVVEVAEKIHKSVAPPITIEGQEVTSTLSMGIAMFPED 666 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 F + +F + L Sbjct: 667 GHDFDTLMKKADAAMYHAKESGRSTYRFFAARMNADAV-AHLALRSGLHRALERGE--FQ 723 Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTM 228 F P V ++ EA+++ N SP+ G I A Sbjct: 724 LYFQPQVSLTGGAVVGAEALIRWNHPERGLVSPAEFIPVAEDSGLIVPMGDWVLRQACRQ 783 Query: 229 AHALELGD--KMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFD 286 A + G +++NL + D + ++ + L P + +E TES +I + Sbjct: 784 AALWQAGGHALTMAVNLSALQF-RRGDLERAVREALEESGLAPHSLELELTESIMIQDHE 842 Query: 287 EFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQ 346 + + L A G+ ++ID FG G++ + L RF D++KI Q + +VH AI Q Sbjct: 843 AVMDMTRRLGALGVQLSIDDFGTGYSSMAYLKRFAVDKLKIDQSFVRDVHTDTDNAAITQ 902 Query: 347 AIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPE 401 AII+ SL+++V A GV E +L G ++ QG L+ + + Sbjct: 903 AIIQMAHSLKLEVIAEGVEVTEVVEFLRDHGCDLAQGFLYGRPMTAQRFEKTVLD 957 >UniRef50_A0YBW6 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YBW6_9GAMM Length = 799 Score = 453 bits (1167), Expect = e-126, Method: Composition-based stats. Identities = 76/432 (17%), Positives = 150/432 (34%), Gaps = 50/432 (11%) Query: 1 MLTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEG-----PE 55 MLT L R R+ ++E +VS + G++L + F + + + Sbjct: 365 MLTGLANRRLFRN-----RLEHVVSNLKKEQSSL---GLILVDLDRFKSVNDAMGHDAGD 416 Query: 56 EQVKMIYRAICQDPRHYNIVELL-------------------CDYAPARRFGKAGMELFD 96 + +K++ + Q R + V L + + + + Sbjct: 417 KLLKIVAGRLQQCVRASDTVARLSSDEFAIILPGIKNSRTTAHVAEKVLTAIQQPVLINE 476 Query: 97 LRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADG 156 + A+ + + + + L F +F + I Sbjct: 477 TEQRLTASIGIAIAPQNGTDAKTIIKNADLALFHAKDNGRNNYQFFTVEMN-----IQLI 531 Query: 157 SDKELDSCALSPTIN--DHFAFHPIVDPLSRRIIAFEAIVQKNE-----DSPSAIAVGQR 209 L N + P + ++ FEA+++ N P+ Sbjct: 532 DRVALTHDLKQAVKNSDFTLVYQPKICLKQGNLVGFEALIRWNHKIRGAVGPTEFIPVAE 591 Query: 210 KDGEIYTADLKSKALAFTMAHALELGDK-----MISINLLPMTLVNEPDAVSFLLNEIKA 264 + G I A + + +++NL + V F+ + I Sbjct: 592 QTGLIIPLGRWVITTACEQLRTMYDEEIVNDSVSMAVNLSAHQF-QDEHLVDFIRDRINT 650 Query: 265 NALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDR 324 + P Q +E TES ++ FD E +++L+ GI ++ID FG G++ L L R + Sbjct: 651 FDIKPGQFEIELTESVLMENFDNAIEKLEALRQLGIQISIDDFGTGYSSLGYLKRLPVNT 710 Query: 325 IKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGD 384 +K+ + +T++ I A+I +L V A GV T ++ +LE +G + QG Sbjct: 711 VKVDRSFVTDIPNDKSDMEITSAVIAMAHNLNYTVVAEGVETEQQLQFLEHSGCDYGQGY 770 Query: 385 LFAKAKLNGIPS 396 F+K + Sbjct: 771 FFSKPLPDHELE 782 >UniRef50_C6P3H6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3H6_9PROT Length = 837 Score = 453 bits (1167), Expect = e-126, Method: Composition-based stats. Identities = 74/442 (16%), Positives = 145/442 (32%), Gaps = 55/442 (12%) Query: 2 LTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EE 56 LT L R H+ + +I + SI+ R N +L + F L + + Sbjct: 408 LTKLPNRRHL-----LDRINQARSISARSN---HYGALLFLDMDRFKILNDTLGHDYGDL 459 Query: 57 QVKMIYRAICQDPRHYNIVELLC------------------------DYAPARRFGKAGM 92 + + R + R + V + R Sbjct: 460 FLVEVSRRMRNCVRDMDTVARIGGDEFVVLIEEIGTDNEEVSTKVALIAEKIRAALTEPY 519 Query: 93 ELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLF 152 L D H + ++ L ++ +F+ + Sbjct: 520 LLKDKEHHSSPSIGVCLYLGNEESVDTLLRHADLAMYQAKESGRNGVRFFDPAMQ----- 574 Query: 153 IADGSDKELDSCALSPT--INDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIA 205 +A + L++ + + R + EA+++ SP+ Sbjct: 575 LAVETRAALEADMRHAVTGKQLRLYYQIQL-TSDHRPLGAEALIRWMHPVRGLVSPAQFI 633 Query: 206 VGQRKDGEIYTADLKSKALAFTMAHAL----ELGDKMISINLLPMTLVNEPDAVSFLLNE 261 + I A + +++IN+ D V + Sbjct: 634 PIAEESSLILEIGHWVLETACKQLVLWSKHERTRNLILAINVSAQQFNKH-DFVDTVSTL 692 Query: 262 IKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQ 321 + + L P ++ +E TES V+S + + +LKA G+ +A+D FG G++ L L + Sbjct: 693 LHLHQLNPNRLKLELTESVVLSDVADVVSKMHALKALGVKLALDDFGTGYSSLSYLKQLP 752 Query: 322 PDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMF 381 D+IKI + +++V ++Q II + + V A GV T ++ +L+ G + Sbjct: 753 LDQIKIDRSFVSDVTTDPSDAVMVQTIINLAHNFRMNVIAEGVETEDQLNFLKQNGCMAY 812 Query: 382 QGDLFAKAKLNGIPSIAWPEKK 403 QG LF K + + Sbjct: 813 QGFLFGKPMPIDEFEALLGQTQ 834 >UniRef50_Q88HN4 Sensory box protein/GGDEF domain protein n=1 Tax=Pseudomonas putida KT2440 RepID=Q88HN4_PSEPK Length = 733 Score = 453 bits (1167), Expect = e-126, Method: Composition-based stats. Identities = 74/407 (18%), Positives = 143/407 (35%), Gaps = 41/407 (10%) Query: 19 KIEEMVSIANRRNMQSDV-TGILLFNGSHFFQLLEG-----PEEQVKMIYRAICQDPRHY 72 +E+ + A R + Q V ++ + F + + ++ + + + + Q R Sbjct: 322 SLEDRLVQACRSSRQRKVQLAVMYIDLDGFKSINDSIGHYFGDQVLIEVAQRLTQQVRPA 381 Query: 73 NIV-------------ELLCD----YAPARRFGKAGME--LFDLRLHERDDVLQAVFDKG 113 + V +LL D R G + + LH + V D Sbjct: 382 DTVVRMGGDEFVVLLTDLLRDEDAVPVAERLLASIGKPYCIQGIDLHVSTSIGITVSDGH 441 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPT--IN 171 + + ++ ++ L + L + + Sbjct: 442 IEQPMKLIQQADMAMYKAKQQGRNNFQWYTSD-----LNHRVCEHRSLRNDLQKAIKTQS 496 Query: 172 DHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAF 226 + P ++ +RR++ EA+++ SP+ G+I L A Sbjct: 497 FSLHYQPQIEARTRRVVGIEALLRWEHPVRGFISPAVFIPVAEDSGQIIPLSLWVLDTAC 556 Query: 227 TMAHA---LELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVIS 283 +++N+ PM V + + + L Q+ +E TES ++ Sbjct: 557 AQLRDLCDQGFNGISMAVNISPMHFQC-GQFVECIQAVLSKHGLSAGQLELEITESLLLH 615 Query: 284 RFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQA 343 ++ + LK G+ +A+D FG GF+ L L D+IKI + I ++ + A Sbjct: 616 NVEQAIATLHRLKDLGVRIALDDFGTGFSSLSYLKCLPIDKIKIDRSFIQDISTNPHDAA 675 Query: 344 IIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 I Q II L + V A GV T + +LE ++ QG FA+ Sbjct: 676 ITQGIISMAHHLSLSVVAEGVETAPQVNFLERGRCDILQGYYFARPM 722 >UniRef50_C6NZE4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZE4_9PROT Length = 727 Score = 453 bits (1167), Expect = e-126, Method: Composition-based stats. Identities = 72/437 (16%), Positives = 145/437 (33%), Gaps = 50/437 (11%) Query: 10 HIRDDEPVKKIE------EMVSIANRRNMQSDVTG-ILLFNGSHFFQLLEG-----PEEQ 57 + +P+ ++ E + A +S G +L + +F L + ++ Sbjct: 295 QLAFYDPLTELPNRRLLNERLQQAFSVGARSGHHGAVLFLDLDNFKTLNDTKGHDIGDQL 354 Query: 58 VKMIYRAICQDPRHYNIVELL----------------------CDYAPA--RRFGKAGME 93 + + + + R+ + V L D R + Sbjct: 355 LIEVAKRLNSCVRNGDTVARLGGDEFVVVLESLSSVPDEAATQADLVAEKIRYALSQPYQ 414 Query: 94 LFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFI 153 L + + +F + ++ +++ + S Sbjct: 415 LANHVHRTTPSIGVVMFRGHQQSLEEVLKFADTAMYQAKTAGRNAIRFYDPVMQASIEAR 474 Query: 154 ADGSDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQ 208 A+ ++ + + +D S R + E +++ SP+ Sbjct: 475 AELEEEL-RQVVERNQLR--LYYQVQMD-SSNRPLGAEVLLRWQHPERGLVSPAQFIPMA 530 Query: 209 RKDGEIYTADLKSKALAFTMAHALELGDKM----ISINLLPMTLVNEPDAVSFLLNEIKA 264 + G I L A T + +++N+ D VS + + Sbjct: 531 EETGHIVPIGLWVLQTACTQLKVWQSDPLTCDLTLAVNVSAKQF-RSMDFVSQVQRTLAQ 589 Query: 265 NALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDR 324 + P + +E TES V+ ++ ++ LK G+S ++D FG G++ L L R D+ Sbjct: 590 SGAKPSLLKLELTESLVLENVEDTIAKMRELKLLGVSFSMDDFGTGYSSLQYLKRLPLDQ 649 Query: 325 IKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGD 384 IKI Q + ++ AI+Q II L + V A GV T + +L+ G FQG Sbjct: 650 IKIDQSFVRDIASDSNDAAIVQTIIAMSEVLGLNVIAEGVETEAQREFLDLRGCHAFQGY 709 Query: 385 LFAKAKLNGIPSIAWPE 401 LF + + Sbjct: 710 LFGRPAPLAEFEAILRK 726 >UniRef50_A1WHK4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Comamonadaceae RepID=A1WHK4_VEREI Length = 836 Score = 453 bits (1167), Expect = e-126, Method: Composition-based stats. Identities = 68/420 (16%), Positives = 138/420 (32%), Gaps = 47/420 (11%) Query: 20 IEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRHYNI 74 ++ + + +L + +F L + + ++ + + R + Sbjct: 413 LDRLQHATVAVTRSNTQGALLFIDLDNFKSLNDTLGHDAGDHLLQQAAQRLKACVREVDT 472 Query: 75 VEL------------------------LCDYAPARRFGKAGMELFDLRLHERDDVLQAVF 110 V L H + A+F Sbjct: 473 VARFGGDEFVVLLAGLSAAAAQASAEAAQVAKHIAASLGQPYALGGAVHHSTPSIGIALF 532 Query: 111 DKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTI 170 + L ++ +F+ + + L++ Sbjct: 533 GPQACRVDELLKQADLAMYQAKAAGRNTQRFFDPEMQAAASH-----RSALEADLRRGLQ 587 Query: 171 NDHF--AFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKA 223 + P+VD R+ EA+V+ N P+ + G I Sbjct: 588 QRELVLHYQPMVDGQ-GRLQGAEALVRWNHPQRGLMPPAEFTPLAEQTGLILPLGQWVLE 646 Query: 224 LAFTMAHALELGDKM----ISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTES 279 A A +S+N+ + D V LL ++A+ PE++ +E TES Sbjct: 647 TACAQLVAWSRSALTRAFSLSVNVSVRQF-RQADFVQQLLATLEASGANPERLTIELTES 705 Query: 280 EVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSG 339 +++ + ++ L+ G+ A+D FG G++ L L R D+IKI + + ++ Sbjct: 706 LLLNDVQDIIARMQQLRCHGLGFALDDFGTGYSSLSQLKRLPLDQIKIDRSFVRDLPADA 765 Query: 340 PRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAW 399 AI+++I+ SL + V A GV T + +L+ G + FQG F + + + Sbjct: 766 GDGAIVRSILALAQSLGLAVVAEGVETRAQLEFLQHHGCQTFQGYHFGRPMPPEALAHRF 825 >UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KAZ1_AZOSB Length = 952 Score = 453 bits (1167), Expect = e-126, Method: Composition-based stats. Identities = 67/436 (15%), Positives = 141/436 (32%), Gaps = 48/436 (11%) Query: 10 HIRDDEPVKKIEEMVSIANR-------RNMQSDVTGILLFNGSHFFQLLEGP-----EEQ 57 ++ +P+ + + + +R + ++ + F + + +E Sbjct: 523 YLAHHDPLTDLPNRLLVLSRLEHALDGAQRRGCRVAVMFLDLDRFKTVNDSLGHAAGDEL 582 Query: 58 VKMIYRAICQDPRHYNIV---------ELLCDYAPARRFGKAGMEL-----------FDL 97 ++ + + R + + LL L Sbjct: 583 LRAVAARLRGALREEDTLGRLGGDEFMVLLEHVEAPADAAVVAKNLVEVLAAPFALSNGH 642 Query: 98 RLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGS 157 + R + + + F + +R ++ L + Sbjct: 643 EVFIRASIGISFYPDDGDDFMTLVRNADAAMYRAKAQGRNTYGFYTED-----LIRSATE 697 Query: 158 DKELDSCALSPTINDHF--AFHPIVDPLSRRIIAFEAIVQKN---ED--SPSAIAVGQRK 210 L++ +D F + P++ R++ EA+V+ E SP+A + Sbjct: 698 RLALETRLRRALEHDEFVVYYQPVLGVKDGRLLGAEALVRWKPQGEPMVSPAAFIPVAEE 757 Query: 211 DGEIYTADLKSKALAFTM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANAL 267 G I A +++NL + D + L + L Sbjct: 758 TGLIVALGEWVLRDACRQVREWIDAGYAFGQVAVNLSAEQFRRQ-DVSAMLATVLAETGL 816 Query: 268 VPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKI 327 Q+ +E TES ++ + ++ LK G+ +AID FG G++ L L RF D++KI Sbjct: 817 PATQLELEITESSLLEAGEHAVGLLERLKQQGVGLAIDDFGTGYSSLAYLKRFSIDKLKI 876 Query: 328 SQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFA 387 + + ++ AI AI+ +L++ V A GV + L G +QG L + Sbjct: 877 DRSFVQDIADDSNDLAIASAIVAMARALDMAVQAEGVEGEAQLELLRGLGCGSYQGYLCS 936 Query: 388 KAKLNGIPSIAWPEKK 403 + + Sbjct: 937 PPLPADEFEARFLRLR 952 >UniRef50_B8GSM4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GSM4_THISH Length = 648 Score = 453 bits (1167), Expect = e-126, Method: Composition-based stats. Identities = 72/386 (18%), Positives = 133/386 (34%), Gaps = 29/386 (7%) Query: 25 SIANRRNMQSDVTGILLFNGSHFFQLLEGPEEQVKMIYRAICQDPRHYNIVELLCDYAPA 84 +A R +++ + G F +L+ + ++V Sbjct: 284 ELARRYGIEASSITLSRLGGDEFGIILDEVDSL---------------DLVV--RIVQHL 326 Query: 85 RRFGKAGMELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEI 144 ++ ++ V +VF + + ++ Sbjct: 327 IEVISREHDIEGHQVFLTCSVGISVFPYDGDDADTLIKNADAAMYDAKQRGRNSFQFYTK 386 Query: 145 PAEDSWLFIADGSDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDS---- 200 +S + + +L + P VD +S +++ EA+V+ Sbjct: 387 DI-NSQTYRQLILENQLVKALAR--EEFEVHYQPQVDVISGQVVGAEALVRWRHPEKGLQ 443 Query: 201 -PSAIAVGQRKDGEIYTADLKSKALAF---TMAHALELGDKMISINLLPMTLVNEPDAVS 256 P+ + G I ISINL + D V Sbjct: 444 PPANFIAIAEETGIIEGLGAWVLQKVCQDIRQLTRDGYRIPRISINLSARQF-RQSDLVE 502 Query: 257 FLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLL 316 N I++ + P I +E TES ++ D ++ L A G+ +AID FG G++ L Sbjct: 503 QCRNTIRSAGIAPAYIELELTESTIMKDIDIAVGMLRQLNALGVRLAIDDFGTGYSSLNN 562 Query: 317 LSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESA 376 L F D +KI + + ++ +AI+ AI+ SLE++V A GV T E+ +L+ Sbjct: 563 LKHFPIDTLKIDKSFVRDIPGDRDDEAIVTAIVALAKSLELEVVAEGVETREQLGFLKRL 622 Query: 377 GIEMFQGDLFAKAKLNGIPSIAWPEK 402 G E+ QG F++ K Sbjct: 623 GCEIVQGYFFSRPLPFEGFREYLKGK 648 >UniRef50_A4BQ25 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) and Response Regulator n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BQ25_9GAMM Length = 818 Score = 453 bits (1167), Expect = e-126, Method: Composition-based stats. Identities = 66/415 (15%), Positives = 146/415 (35%), Gaps = 39/415 (9%) Query: 17 VKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRH 71 + ++++ ++ A R N G+L + F ++ + + ++ + ICQ R Sbjct: 400 LDRMQQALAYARRYN---HRVGVLFVDLDRFKRINDTLGHHAGDTILRTVAERICQGVRR 456 Query: 72 YNIV-------------------ELLCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDK 112 + V +L + R+ +++ + ++ + A++ Sbjct: 457 SDTVSRHGGDEFVVIAAQVFDSNDLASIVSKIRKTVSEPIKVKNRQVVLTCSIGIALYPF 516 Query: 113 GTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTIND 172 + ++ Y+ ++ ++EL + Sbjct: 517 DGEDTDTLLKNADTAMYQAKENGRNDFQYYTKEM-NAQSHEMLNLEEELRRAVKAGEFV- 574 Query: 173 HFAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKS---KAL 224 + P VD + + EA+++ P + G I Sbjct: 575 -LHYQPQVDLQTGALSRLEALIRWQHPERGMLAPGTFIPVLEETGLIEPVGEWVVREAVR 633 Query: 225 AFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISR 284 + +EL +++NL N + + + + P + +E TES +++ Sbjct: 634 QCAVWKEMELPPVTVAVNLSVRQFAN-LNIAEAIERIVTEAGIPPACLELEITESVLMAD 692 Query: 285 FDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAI 344 + AEA+++L G+ VA+D FG G+ L L R + +K+ ++++ AI Sbjct: 693 AFDGAEALRALSQRGLRVAVDDFGTGYCALHYLRRLPVNTLKVDHSFVSDLEGDPTTAAI 752 Query: 345 IQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAW 399 + AII L +V A GV T + L G ++ QG L+ + Sbjct: 753 VSAIITLGHDLGCKVVAEGVETLAQCNHLHRLGCDLAQGYLYYRPCPPEEIEPLL 807 >UniRef50_Q2SG37 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SG37_HAHCH Length = 841 Score = 453 bits (1166), Expect = e-126, Method: Composition-based stats. Identities = 63/420 (15%), Positives = 148/420 (35%), Gaps = 43/420 (10%) Query: 17 VKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRH 71 + ++ + ++ A R + ++ + F + + ++ ++++ + + + R+ Sbjct: 293 LDRVTQSINHARRNESRL---ALIFIDLDKFKLINDTLGHNAGDDLLRIMSKRLQECTRN 349 Query: 72 YNIV-------------------ELLCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDK 112 + + +L A A + L + + F + Sbjct: 350 CDTLARFGGDEFVLLVDNLESEADLTHLAARLISSVSAPVLLLGQSHSITCSLGISSFPE 409 Query: 113 GTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTIND 172 ++ + +R +F +D +L+S ND Sbjct: 410 DGDNVEVLMRHADIAMYRAKESGRNSYQFFTHQMQDR-----LNERLKLESSLKQALEND 464 Query: 173 HF--AFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSK--- 222 F + P VD + +II EA+++ + P + I Sbjct: 465 EFVLHYQPQVDLSTGKIIGLEALIRWQSPTLGLVPPGDFIPAAEEGRLISAIGEWVIFAV 524 Query: 223 ALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVI 282 L ++IN+ + + + + + + P+ + +E TES + Sbjct: 525 CKRLQSWRRQGLKIVPVAINISALQFMEQKT-EELVKQALNEYMVEPKYLELELTESLSM 583 Query: 283 SRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQ 342 ++ LK G+S++ID FG G++ L L RF +++KI + ++ + + Sbjct: 584 LDPVTSISLMQRLKDIGVSLSIDDFGTGYSNLSYLKRFPVNKLKIDKSFVSGLTNNPDDY 643 Query: 343 AIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEK 402 +I++AII+ SL ++ A G T + L + + QG F++ E+ Sbjct: 644 SIVKAIIRMSQSLGLKTIAEGAETAGQIALLAAENCDAIQGFYFSRPLPEAEICAMLKER 703 >UniRef50_Q47UD6 Sensory box sensor/GGDEF/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47UD6_COLP3 Length = 921 Score = 453 bits (1166), Expect = e-126, Method: Composition-based stats. Identities = 67/418 (16%), Positives = 147/418 (35%), Gaps = 39/418 (9%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLE-----GPEEQVKMIYRAICQDPRHY 72 ++E+ +++++R + + +F + + +E +K + + R Sbjct: 495 DRLEQAIALSDRHQ---HKFAVFFMDLDNFKIINDTMGHDAGDELLKQVSLRLSCTGRKT 551 Query: 73 NIVELL-----------------CDYAPAR--RFGKAGMELFDLRLHERDDVLQAVFDKG 113 + V L R K +E+ ++ + ++ Sbjct: 552 DTVARLGGDEFAFIITKVNTIEDAVTFAQRLNSLLKTPIEINGNNINMGSSIGITIYPDD 611 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 + + + + ++ +F + +L + Sbjct: 612 AANSEELLRNADIAMYQAKDDGRNTVRFFTSEMNARLQRNKEVL-TDLAESLTK--EHFE 668 Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTM 228 + P+ ++ EA+++ + P K G I A A Sbjct: 669 LYYQPLFTIDQNILVGAEALIRWHHPEKGMIPPDQFIAVAEKSGLINELGDWVLAQACRE 728 Query: 229 AHA---LELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRF 285 + ++IN+ P+ D + +L + + + E I +E TE V+ Sbjct: 729 IKNFLNAGITVFKVAINISPVQF-RRKDLLQHMLMILAQHDVSAELIELEITEGAVMDNV 787 Query: 286 DEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAII 345 D+ E +++L AG +A+D FG G++ L L RF ++KI + I+++ ++I Sbjct: 788 DQAIETMQALHDAGFQLAMDDFGTGYSSLSYLKRFPIQKVKIDRSFISDLENDDDSKSIT 847 Query: 346 QAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEKK 403 AII+ SL + V A GV T E+ +L++ + QG + + E K Sbjct: 848 TAIIQMSHSLGLHVLAEGVETEEQLHYLQAEKCDYVQGYYTGRPIPASEFIKNFSESK 905 >UniRef50_A0RLD3 Diguanylate cyclase/phosphodiesterase n=79 Tax=cellular organisms RepID=A0RLD3_BACAH Length = 910 Score = 453 bits (1166), Expect = e-126, Method: Composition-based stats. Identities = 72/406 (17%), Positives = 149/406 (36%), Gaps = 39/406 (9%) Query: 17 VKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGP-----EEQVKMIYRAICQDPRH 71 K ++ +++ A ++ ++ + F ++ + + + + + + R Sbjct: 497 EKDLKNILNTAQ---ASANDVAVMFLDLDRFKKINDRLGHGIGDLLLIEVAKRLRGCLRS 553 Query: 72 YNIVE---------LLCDYAPARRFG----------KAGMELFDLRLHERDDVLQAVFDK 112 ++V LL D + + D L + A++ Sbjct: 554 KDVVARQGGDEFTILLPDMYSEKSAAFIAEQILNILNKPFFIKDEELSITPSIGIAMYPD 613 Query: 113 GTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTIND 172 + + + +R + +F ++ + EL Sbjct: 614 CGTDVTELMKNADMAMYRAKANGKNRFVFFSKEM-SIAQNESNFLEGELSKALQQNE--F 670 Query: 173 HFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAF- 226 + P V +++II FEA+++ SP+ + G I A Sbjct: 671 FLEYQPQVSTKTKQIIGFEALIRWKHPKLGIVSPAQFIPLAEETGFIIELGNWILRTACL 730 Query: 227 --TMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISR 284 H + +NL + N D + + ++ L PE + +E TES I++ Sbjct: 731 EAKRWHNQGFSHLKVGVNLSVVQF-NHADLIPTISKVLEETELKPEALDIEITESIAINQ 789 Query: 285 FDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAI 344 ++ L+ GI ++ID FG G++ L L+++ + +KI++E I + S +AI Sbjct: 790 NQSVVAKLEQLQNLGIQISIDDFGTGYSSLAYLTKYPINTLKIAREFICGITTSPLEEAI 849 Query: 345 IQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 I +II L ++V A GV T E+W +L + QG +K Sbjct: 850 ISSIITLSKELNLEVIAEGVETEEQWKFLYEQNCDHIQGFFISKPV 895 >UniRef50_Q21FF8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21FF8_SACD2 Length = 581 Score = 453 bits (1166), Expect = e-126, Method: Composition-based stats. Identities = 67/432 (15%), Positives = 135/432 (31%), Gaps = 44/432 (10%) Query: 10 HIRDDEPVKKIEEMVSIANRR----NMQSDVTGILLFNGSHFFQLLEGP-----EEQVKM 60 + ++ R + + +++ N F + + ++ + Sbjct: 144 QFDPLTGLANRAQLYEQLRRAIDYGRVHRECVTVMMLNIDRFKNINDSLGVGAGDDVLIQ 203 Query: 61 IYRAICQDPRHYNIVELL------------CDYAPARRFGK-------AGMELFDLRLHE 101 I + R + V L + + + + + Sbjct: 204 ISEILRNVLRDNDTVARLGSDEFILLLDKVDNPHHITKIADKILNAIGQPLNICGHEITC 263 Query: 102 RDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKEL 161 + + F L R + + + + + Sbjct: 264 TASLGVSQFPIHGDSIDLLLKHADEAMARAKSEGKNRYKIYTAQMSERTVDALL-----M 318 Query: 162 DSCALSPTINDHF--AFHPIVDPLSRRIIAFEAIVQKNE-----DSPSAIAVGQRKDGEI 214 ++ D F + P V + +II EA+++ SP + G I Sbjct: 319 ENDLRRALEQDEFILFYQPQVHLRTGKIIGLEALIRWQHKTKGVISPLDFIPLAEETGLI 378 Query: 215 YTADLKSKALAFTM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQ 271 A A L +++NL + ++ + + L P+ Sbjct: 379 EEVGAWVLAHACERFHHWLKQGLSLGKVAVNLSARQF-RQAHFAETVVEALNKSKLPPQY 437 Query: 272 IIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQEL 331 + +E TES + DE + + L G+S+AID FG G++ L L +F +++KI + Sbjct: 438 LELEITESLTMQDTDEVLQTLGYLNKLGLSIAIDDFGTGYSSLSYLKKFPVNKLKIDRTF 497 Query: 332 ITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKL 391 I +V AI ++II ++ + V A GV + WL G + QG F K Sbjct: 498 IHDVGSELDDGAIAKSIIDLAHNMSMLVVAEGVERLGQSRWLYDQGCDQVQGYYFCKPLS 557 Query: 392 NGIPSIAWPEKK 403 +K Sbjct: 558 ENELLKLLYSEK 569 >UniRef50_C7CCD7 Putative diguanylate cyclase (GGDEF) /phosphodiesterase (EAL), with GAF and two PAS/PAC sensor domains n=1 Tax=Methylobacterium extorquens DM4 RepID=C7CCD7_METED Length = 1028 Score = 453 bits (1166), Expect = e-126, Method: Composition-based stats. Identities = 72/405 (17%), Positives = 149/405 (36%), Gaps = 38/405 (9%) Query: 18 KKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLE-----GPEEQVKMIYRAICQDPRHY 72 + +E+ ++ R +L + F + + +E + I + R Sbjct: 600 EHLEQRLAEVRR---GRGQAALLCLDLDRFKSINDMLGHPAGDELLCQIATRLRATVRGG 656 Query: 73 NIVELL---------CDYAPARRFGK----------AGMELFDLRLHERDDVLQAVFDKG 113 ++V L AR+ ++L + + A Sbjct: 657 DVVVRLGGDEFAIIVSHLDHARQASVLAQRVIDAVGQPLDLGGHLVTVGISIGIAFAPTN 716 Query: 114 TSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDH 173 + + + L +R A ++E D+ + + E+ + Sbjct: 717 GDTSETLFKNADLALYRAKASARNTYCFYEAGM-DAAVEARMQLEFEMREAITCG--SFA 773 Query: 174 FAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTM 228 + P++ RI+ FEA+++ +P + G I + A Sbjct: 774 LHYQPVLRLADHRIVGFEALMRWPHPKRGMIAPDEFIPSAEETGLIVPLGSWALQEACRE 833 Query: 229 AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEF 288 A + I++N+ + +P +++ + A+ L P ++++E TES ++ + Sbjct: 834 AASWP-DHLRIAVNVSAVQF-QQPGLEQGVMSALAASGLAPHRLVLEVTESVLVQDAEAV 891 Query: 289 AEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAI 348 + LK+ G+ +A+D FG G++ L L RF DRIKI + I+ + AI++A+ Sbjct: 892 IACLHRLKSLGVRIALDDFGTGYSSLSYLRRFPFDRIKIDRSFISEIG-DPGAAAIVRAV 950 Query: 349 IKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNG 393 + L V+A GV T + + S G QG L ++ Sbjct: 951 VGIAMQLGATVTAEGVETTAQLEQVRSEGCMEVQGYLVSRPLPAD 995 >UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=3 Tax=Polaromonas RepID=Q12GF0_POLSJ Length = 989 Score = 452 bits (1165), Expect = e-126, Method: Composition-based stats. Identities = 80/437 (18%), Positives = 149/437 (34%), Gaps = 54/437 (12%) Query: 10 HIRDDEPVKKIE------EMVSIANRRNMQSDVTGILLF-NGSHFFQLLEG-----PEEQ 57 H+ +P+ ++ + + A + G+L+F + +F L + + Sbjct: 555 HLAFYDPLTELPNRQLLLDRLEQALADCTITRQEGVLMFIDLDNFKILNDTVGHSKGDLL 614 Query: 58 VKMIYRAICQDPRHYNIVELLC-------------DYAPARRFGKA-----------GME 93 ++ + + R + V L A R + + Sbjct: 615 LQKVAVRLKGCVRKLDTVARLGGDEFVVMLQDLGTQPEAATRKAQIVAEKVLATLREPYD 674 Query: 94 LFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFI 153 L + + + F+ L ++ + +F+ + S Sbjct: 675 LAGYQHYSTSSIGVTPFNARQGSVSELLKQADLAMYQAKTMGRNTVCFFDPDMQAS---- 730 Query: 154 ADGSDKELDSCALSPTINDHF--AFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAV 206 ++ L + + F + P VD +RI EA+++ SP+ Sbjct: 731 -VSANAALSTDLRAGLREHQFLVHYQPQVD-REQRITGVEALLRWKHPQRGMVSPAEFIP 788 Query: 207 GQRKDGEIYTADLKSKALAFTMAHALELGD----KMISINLLPMTLVNEPDAVSFLLNEI 262 + G I A + I++N+ PD V ++ I Sbjct: 789 VAEETGLILPLGQWVLEQACLQLAVWQKRPETAGLSIAVNVSVRQF-RHPDFVDMVMAAI 847 Query: 263 KANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQP 322 K + P + +E TES + R + + +LKA G+++A+D FG G++ L L R Sbjct: 848 KHTGIQPHNLKLELTESLLADRMEIAIAKMGTLKALGVTLALDDFGMGYSSLSYLKRLPL 907 Query: 323 DRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQ 382 D++KI + I +V AI AII SL + V A GV T + +L G +Q Sbjct: 908 DQLKIDKSFIADVFSDPNDAAICSAIISLAQSLGLDVIAEGVETEAQRSFLAGLGCGYYQ 967 Query: 383 GDLFAKAKLNGIPSIAW 399 G LF Sbjct: 968 GFLFCPPLPIAEFEAFM 984 >UniRef50_Q21SH7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q21SH7_RHOFD Length = 658 Score = 452 bits (1165), Expect = e-126, Method: Composition-based stats. Identities = 73/430 (16%), Positives = 151/430 (35%), Gaps = 44/430 (10%) Query: 11 IRDDEPVKKIEEMVSIANR-------RNMQSDVTGILLFNGSHFFQLLEG-----PEEQV 58 + +P+ ++ + + +R +L+ + F + + +E + Sbjct: 230 LAHHDPLTRLPNRLLLLSRLQHGIELAQRDGTHLALLMLDLDRFKDINDSFGHLVGDELL 289 Query: 59 KMIYRAICQDPRHYNIV---------ELLCDYAPARRFGKAGMEL-----------FDLR 98 +++ + + R + V L+ D A A + + ++ + Sbjct: 290 QLVATRLVKQVRTIDTVGRFGGDEFSVLMEDVAGAEQAARVANDIIRVLSEPYGLSSGVE 349 Query: 99 LHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSD 158 + V +++ +L ++ + + YF + + Sbjct: 350 VRIGASVGISIYPDNGLTPELMLQQADSALYQAKIEGRGRFAYFSESLTQAAR-ARIDIE 408 Query: 159 KELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNED-----SPSAIAVGQRKDGE 213 L + + P VD S RI+ EA+V+ P+ G Sbjct: 409 VRLRRAITQGELR--VYYQPQVDIPSGRIVGAEALVRWQCPIEGLVPPARFITIAEATGL 466 Query: 214 IYTADLKSKALAFTM---AHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPE 270 I D A L +++NL + + D + ++ Sbjct: 467 IGEIDDWVLRETCQQGQRWRAAGLPTLTLAVNLSAYQFL-QGDISQTVAQVLRDTGYPAA 525 Query: 271 QIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQE 330 + +E TES ++ R + + + LKA G+ +AID FG G++ L L F D +KI + Sbjct: 526 FLELELTESALMQREAQAIQMLDRLKALGVRLAIDDFGTGYSSLAYLKLFPLDVLKIDKR 585 Query: 331 LITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 I ++ I+ AII SL ++V A GV E+ +L++ G + FQG L ++ Sbjct: 586 FIDDIPAHRDDMEIVTAIIAMAHSLRLKVLAEGVENKEQLAYLQTQGCDQFQGYLTSRPV 645 Query: 391 LNGIPSIAWP 400 + Sbjct: 646 PAAEFEKLFL 655 >UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio RepID=A7K0U5_VIBSE Length = 815 Score = 452 bits (1165), Expect = e-126, Method: Composition-based stats. Identities = 63/391 (16%), Positives = 133/391 (34%), Gaps = 35/391 (8%) Query: 9 SHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGPEEQVKMIYRAICQD 68 H D+ + K+ + N G G F +L Sbjct: 444 GHFCGDQLLSKLAIRLQDILHLNAHVARIG-----GDEFVIIL----------------- 481 Query: 69 PRHYNIVELLCDYAPARRFGKAGMELFDL-RLHERDDVLQAVFDKGTSKFQLTYDDRALQ 127 P ++ V LL + +L + L + A++ + + + Sbjct: 482 PDVHSDVALLETVGDILSVFQQPFDLANHDSLRVSTSIGIALYPRDGQDSETLLKNADTA 541 Query: 128 FFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPIVDPLSRRI 187 + ++ D + L + F P + I Sbjct: 542 MYLAKKNGRNGYAFYSPDLTDKSVS-HVRIQSALHQAIEKQQLRLEF--QPQYNLEQHAI 598 Query: 188 IAFEAIVQKNEDS-----PSAIAVGQRKDGEIYTADLKSKALAFTM---AHALELGDKMI 239 + E +++ P+ K G I + A + I Sbjct: 599 VGVETLLRWQHPEFGLVPPADFIPIAEKTGLIQSIGEWVLLHACQQGNAWLEQGVEFGRI 658 Query: 240 SINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAG 299 ++N+ + L + + + L + + +++ +E TES ++ + ++ L+ G Sbjct: 659 AVNVSALQL-QQSNFIQRLSDILNQTGFPAQRLDLEITESFLLIDPQQAIASLNQLRELG 717 Query: 300 ISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQV 359 I +++D FG G++ L L +++KI + +++V + AI+ AII +L ++V Sbjct: 718 IEISLDDFGTGYSSLSYLKGLPINKLKIDRSFVSDVPSNSDSNAIVNAIIAMGKTLSLKV 777 Query: 360 SAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 A G+ T E+ +L G QG LF++ Sbjct: 778 VAEGIETQEQADYLFEKGCVYGQGYLFSRPV 808 >UniRef50_Q2BRN8 Signal transduction protein containing membrane, EAL and GGDEF domains-like n=1 Tax=Neptuniibacter caesariensis RepID=Q2BRN8_9GAMM Length = 690 Score = 452 bits (1164), Expect = e-126, Method: Composition-based stats. Identities = 70/391 (17%), Positives = 133/391 (34%), Gaps = 31/391 (7%) Query: 10 HIRDDEPVKKIEEMVSI-ANRRNM-QSDVTGILLFNGSHFFQLLEGPEEQVKMIYRAICQ 67 I D + + +++ A+R N T + G F + C Sbjct: 283 QINDTMGHEAGDALLTTIASRLNFCTRQRTSVFRLGGDEFTIIF------------RNCN 330 Query: 68 DPRHYNIVELLCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQ 127 D H ++E + + + + + + + + L Sbjct: 331 DRTH--VIERTNEVLS---LLAQPIHIGPHEISITVSIGITLIGLDSPDASDLLRNADLA 385 Query: 128 FFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPIVDPLSRRI 187 + ++E D + +L S + + P + + +I Sbjct: 386 MYYAKKSGRNTFAFYEQHM-DEEAQRTLSIEHDLRSALDGNQLR--LVYQPQISADNGKI 442 Query: 188 IAFEAIVQKNED-----SPSAIAVGQRKDGEIYTADLKSKALAFTMA---HALELGDKMI 239 A EA+++ + P + G I A A A L L + Sbjct: 443 TAIEALLRWDHPLDGPIPPDEFIPHAEETGLIIPIGRWVMAEACKAAKAIQDLGLPPIKV 502 Query: 240 SINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAG 299 +NL ++P +S + I+ + L P + +E TES ++ + + S+K G Sbjct: 503 CVNLSTRQF-DDPALISHIEEAIETSGLDPRWLELEITESMLMRDMSTAIDILNSIKQKG 561 Query: 300 ISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQV 359 IS+AID FG G++ L L + D +KI + + ++ AI II L + V Sbjct: 562 ISLAIDDFGTGYSSLSYLKKMPVDLLKIDRSFLQDIPSDRDNMAITSTIIAMTKQLGLSV 621 Query: 360 SAMGVATPEEWMWLESAGIEMFQGDLFAKAK 390 A GV + +L + QG L ++ Sbjct: 622 VAEGVENQAQMAFLNRNQCTLMQGYLISQPV 652 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.315 0.189 0.691 Lambda K H 0.267 0.0575 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,974,580,740 Number of Sequences: 3077464 Number of extensions: 178973193 Number of successful extensions: 454348 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 14430 Number of HSP's successfully gapped in prelim test: 3084 Number of HSP's that attempted gapping in prelim test: 405959 Number of HSP's gapped (non-prelim): 19728 length of query: 403 length of database: 1,040,396,356 effective HSP length: 131 effective length of query: 272 effective length of database: 637,248,572 effective search space: 173331611584 effective search space used: 173331611584 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.0 bits) S2: 95 (40.7 bits)