Email l.a.kelley@imperial.ac.uk Description P52119 Date Thu Jan 5 12:05:25 GMT 2012 Unique Job ID eb245db961c269a8

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2hj1A_ 100.0 52 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of a 3d domain-swapped dimer of protein hi0395 from2 haemophilus influenzae 2 d2hj1a1 100.0 52 Fold:beta-Grasp (ubiquitin-like) Superfamily:MoaD/ThiS Family:HI0395-like 3 c3hvzB_ 97.3 17 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of the tgs domain of the clolep_03100 protein from2 clostridium leptum, northeast structural genomics consortium target3 qlr13a 4 c2kmmA_ 97.1 24 PDB header:hydrolase Chain: A: PDB Molecule:guanosine-3',5'-bis(diphosphate) 3'- PDBTitle: solution nmr structure of the tgs domain of pg1808 from2 porphyromonas gingivalis. northeast structural genomics3 consortium target pgr122a (418-481) 5 c2ekiA_ 96.8 20 PDB header:signaling protein Chain: A: PDB Molecule:developmentally-regulated gtp-binding protein 1; PDBTitle: solution structures of the tgs domain of human2 developmentally-regulated gtp-binding protein 1 6 d1vjka_ 96.7 22 Fold:beta-Grasp (ubiquitin-like) Superfamily:MoaD/ThiS Family:MoaD 7 d1zud21 96.6 20 Fold:beta-Grasp (ubiquitin-like) Superfamily:MoaD/ThiS Family:ThiS 8 d1wxqa2 96.5 22 Fold:beta-Grasp (ubiquitin-like) Superfamily:TGS-like Family:G domain-linked domain 9 c2qieB_ 96.0 21 PDB header:transferase Chain: B: PDB Molecule:molybdopterin synthase small subunit; PDBTitle: staphylococcus aureus molybdopterin synthase in complex2 with precursor z 10 c3po0A_ 95.9 24 PDB header:protein binding Chain: A: PDB Molecule:small archaeal modifier protein 1; PDBTitle: crystal structure of samp1 from haloferax volcanii 11 d1tkea1 95.8 13 Fold:beta-Grasp (ubiquitin-like) Superfamily:TGS-like Family:TGS domain 12 d1wgka_ 94.9 16 Fold:beta-Grasp (ubiquitin-like) Superfamily:MoaD/ThiS Family:C9orf74 homolog 13 c3cwiA_ 94.8 23 PDB header:biosynthetic protein Chain: A: PDB Molecule:thiamine-biosynthesis protein this; PDBTitle: crystal structure of thiamine biosynthesis protein (this)2 from geobacter metallireducens. northeast structural3 genomics consortium target gmr137 14 c2qjlA_ 94.5 14 PDB header:signaling protein Chain: A: PDB Molecule:ubiquitin-related modifier 1; PDBTitle: crystal structure of urm1 15 c2kl0A_ 93.2 20 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative thiamin biosynthesis this; PDBTitle: solution nmr structure of rhodopseudomonas palustris rpa3574,2 northeast structural genomics consortium (nesg) target rpr325 16 c2g1eA_ 93.1 17 PDB header:transferase Chain: A: PDB Molecule:hypothetical protein ta0895; PDBTitle: solution structure of ta0895 17 c2l52A_ 92.9 22 PDB header:protein binding Chain: A: PDB Molecule:methanosarcina acetivorans samp1 homolog; PDBTitle: solution structure of the small archaeal modifier protein 1 (samp1)2 from methanosarcina acetivorans 18 d1nyra2 92.8 22 Fold:beta-Grasp (ubiquitin-like) Superfamily:TGS-like Family:TGS domain 19 d2cu3a1 92.7 27 Fold:beta-Grasp (ubiquitin-like) Superfamily:MoaD/ThiS Family:ThiS 20 d1tygb_ 91.9 22 Fold:beta-Grasp (ubiquitin-like) Superfamily:MoaD/ThiS Family:ThiS 21 d1xo3a_ not modelled 91.5 18 Fold:beta-Grasp (ubiquitin-like) Superfamily:MoaD/ThiS Family:C9orf74 homolog 22 d1fm0d_ not modelled 91.0 24 Fold:beta-Grasp (ubiquitin-like) Superfamily:MoaD/ThiS Family:MoaD 23 c3dwmA_ not modelled 90.9 22 PDB header:transferase Chain: A: PDB Molecule:9.5 kda culture filtrate antigen cfp10a; PDBTitle: crystal structure of mycobacterium tuberculosis cyso, an antigen 24 c3u7zA_ not modelled 89.8 17 PDB header:metal binding protein Chain: A: PDB Molecule:putative metal binding protein rumgna_00854; PDBTitle: crystal structure of a putative metal binding protein rumgna_008542 (zp_02040092.1) from ruminococcus gnavus atcc 29149 at 1.30 a3 resolution 25 c1tygG_ not modelled 89.1 23 PDB header:biosynthetic protein Chain: G: PDB Molecule:yjbs; PDBTitle: structure of the thiazole synthase/this complex 26 c2dwqB_ not modelled 89.0 16 PDB header:hydrolase Chain: B: PDB Molecule:gtp-binding protein; PDBTitle: thermus thermophilus ychf gtp-binding protein 27 d1v8ca1 not modelled 88.4 27 Fold:beta-Grasp (ubiquitin-like) Superfamily:MoaD/ThiS Family:MoaD 28 c1wxqA_ not modelled 88.2 22 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:gtp-binding protein; PDBTitle: crystal structure of gtp binding protein from pyrococcus horikoshii2 ot3 29 c2k9xA_ not modelled 87.2 18 PDB header:unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution structure of urm1 from trypanosoma brucei 30 d1rwsa_ not modelled 86.8 29 Fold:beta-Grasp (ubiquitin-like) Superfamily:MoaD/ThiS Family:ThiS 31 c1v8cA_ not modelled 86.4 27 PDB header:protein binding Chain: A: PDB Molecule:moad related protein; PDBTitle: crystal structure of moad related protein from thermus2 thermophilus hb8 32 c3rpfC_ not modelled 86.4 20 PDB header:transferase Chain: C: PDB Molecule:molybdopterin converting factor, subunit 1 (moad); PDBTitle: protein-protein complex of subunit 1 and 2 of molybdopterin-converting2 factor from helicobacter pylori 26695 33 c1jalA_ not modelled 84.0 21 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:ychf protein; PDBTitle: ychf protein (hi0393) 34 c2ohfA_ not modelled 82.0 18 PDB header:hydrolase Chain: A: PDB Molecule:gtp-binding protein 9; PDBTitle: crystal structure of human ola1 in complex with amppcp 35 c1wwtA_ not modelled 81.3 20 PDB header:ligase Chain: A: PDB Molecule:threonyl-trna synthetase, cytoplasmic; PDBTitle: solution structure of the tgs domain from human threonyl-2 trna synthetase 36 c1dm9A_ not modelled 70.7 17 PDB header:structural genomics Chain: A: PDB Molecule:hypothetical 15.5 kd protein in mrca-pcka PDBTitle: heat shock protein 15 kd 37 d1dm9a_ not modelled 70.7 17 Fold:Alpha-L RNA-binding motif Superfamily:Alpha-L RNA-binding motif Family:Heat shock protein 15 kD 38 c1ni3A_ not modelled 70.2 20 PDB header:hydrolase Chain: A: PDB Molecule:ychf gtp-binding protein; PDBTitle: structure of the schizosaccharomyces pombe ychf gtpase 39 c3kt9A_ not modelled 64.6 13 PDB header:hydrolase Chain: A: PDB Molecule:aprataxin; PDBTitle: aprataxin fha domain 40 c2eh0A_ 64.0 13 PDB header:transport protein Chain: A: PDB Molecule:kinesin-like protein kif1b; PDBTitle: solution structure of the fha domain from human kinesin-2 like protein kif1b 41 d1czpa_ not modelled 59.5 9 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related 42 c2k6pA_ not modelled 56.7 23 PDB header:unknown function Chain: A: PDB Molecule:uncharacterized protein hp_1423; PDBTitle: solution structure of hypothetical protein, hp1423 43 c1yj5C_ not modelled 55.7 29 PDB header:transferase Chain: C: PDB Molecule:5' polynucleotide kinase-3' phosphatase fha domain; PDBTitle: molecular architecture of mammalian polynucleotide kinase, a dna2 repair enzyme 44 d2fy8a2 not modelled 52.0 13 Fold:TrkA C-terminal domain-like Superfamily:TrkA C-terminal domain-like Family:TrkA C-terminal domain-like 45 c2bs2E_ not modelled 51.6 15 PDB header:oxidoreductase Chain: E: PDB Molecule:quinol-fumarate reductase iron-sulfur subunit b; PDBTitle: quinol:fumarate reductase from wolinella succinogenes 46 d1frda_ not modelled 50.7 12 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related 47 d1xr4a1 not modelled 49.4 40 Fold:NagB/RpiA/CoA transferase-like Superfamily:NagB/RpiA/CoA transferase-like Family:CoA transferase alpha subunit-like 48 d1yjma1 not modelled 49.0 28 Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain 49 c2wlbB_ not modelled 45.6 19 PDB header:electron transport Chain: B: PDB Molecule:electron transfer protein 1, mitochondrial; PDBTitle: adrenodoxin-like ferredoxin etp1fd(516-618) of2 schizosaccharomyces pombe mitochondria 50 d1offa_ not modelled 45.5 15 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related 51 c3fm8A_ not modelled 45.5 14 PDB header:transport protein/hydrolase activator Chain: A: PDB Molecule:kinesin-like protein kif13b; PDBTitle: crystal structure of full length centaurin alpha-1 bound with the fha2 domain of kif13b (capri target) 52 c1tkeA_ not modelled 44.2 9 PDB header:ligase Chain: A: PDB Molecule:threonyl-trna synthetase; PDBTitle: crystal structure of the editing domain of threonyl-trna2 synthetase complexed with serine 53 d2fug33 not modelled 41.0 26 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin domains from multidomain proteins 54 d1p9ka_ not modelled 40.3 8 Fold:Alpha-L RNA-binding motif Superfamily:Alpha-L RNA-binding motif Family:YbcJ-like 55 d1krha3 not modelled 38.4 13 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin domains from multidomain proteins 56 d1pfda_ not modelled 37.7 12 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related 57 c3p42D_ not modelled 37.6 10 PDB header:unknown function Chain: D: PDB Molecule:predicted protein; PDBTitle: structure of gfcc (ymcb), protein encoded by the e. coli group 42 capsule operon 58 d1doia_ not modelled 37.2 32 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related 59 c2e6zA_ not modelled 37.0 36 PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt5; PDBTitle: solution structure of the second kow motif of human2 transcription elongation factor spt5 60 d3c8ya2 not modelled 36.5 15 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin domains from multidomain proteins 61 d2cjoa_ not modelled 34.6 12 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related 62 c1c4cA_ not modelled 34.4 15 PDB header:oxidoreductase Chain: A: PDB Molecule:protein (fe-only hydrogenase); PDBTitle: binding of exogenously added carbon monoxide at the active2 site of the fe-only hydrogenase (cpi) from clostridium3 pasteurianum 63 d1wlna1 not modelled 34.4 8 Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain 64 d2bt6a1 not modelled 33.1 12 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related 65 d4fxca_ not modelled 31.5 13 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related 66 d2vbua1 not modelled 30.8 40 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin kinase-like Family:CTP-dependent riboflavin kinase-like 67 d2g1la1 not modelled 29.4 8 Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain 68 d1rp5a2 not modelled 28.9 12 Fold:Penicillin-binding protein 2x (pbp-2x), c-terminal domain Superfamily:Penicillin-binding protein 2x (pbp-2x), c-terminal domain Family:Penicillin-binding protein 2x (pbp-2x), c-terminal domain 69 d1iuea_ not modelled 28.6 6 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related 70 c2fugC_ not modelled 28.3 26 PDB header:oxidoreductase Chain: C: PDB Molecule:nadh-quinone oxidoreductase chain 3; PDBTitle: crystal structure of the hydrophilic domain of respiratory complex i2 from thermus thermophilus 71 c3l5aA_ not modelled 28.2 15 PDB header:oxidoreductase Chain: A: PDB Molecule:nadh/flavin oxidoreductase/nadh oxidase; PDBTitle: crystal structure of a probable nadh-dependent flavin oxidoreductase2 from staphylococcus aureus 72 c3dh3C_ not modelled 26.4 25 PDB header:isomerase/rna Chain: C: PDB Molecule:ribosomal large subunit pseudouridine synthase f; PDBTitle: crystal structure of rluf in complex with a 22 nucleotide2 rna substrate 73 d1awda_ not modelled 26.0 20 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related 74 d1i7ha_ not modelled 25.6 20 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related 75 c3gqsB_ not modelled 25.3 19 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:adenylate cyclase-like protein; PDBTitle: crystal structure of the fha domain of ct664 protein from chlamydia2 trachomatis 76 d1yvca1 not modelled 25.2 26 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:TRAM domain 77 d1ujxa_ not modelled 23.9 24 Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain 78 c2bknA_ not modelled 23.9 7 PDB header:membrane protein Chain: A: PDB Molecule:hypothetical protein ph0236; PDBTitle: structure analysis of unknown function protein 79 c3ah7A_ not modelled 23.7 15 PDB header:metal binding protein Chain: A: PDB Molecule:[2fe-2s]ferredoxin; PDBTitle: crystal structure of the isc-like [2fe-2s] ferredoxin (fdxb) from2 pseudomonas putida jcm 20004 80 d2affa1 not modelled 22.9 15 Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain 81 d1frra_ not modelled 22.8 20 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related 82 d2jioa1 not modelled 22.7 25 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 83 d1fxia_ not modelled 22.6 15 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related 84 d1vioa2 not modelled 22.3 15 Fold:Alpha-L RNA-binding motif Superfamily:Alpha-L RNA-binding motif Family:Pseudouridine synthase RsuA N-terminal domain 85 d1e0za_ not modelled 22.2 32 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related 86 d2brfa1 not modelled 21.4 21 Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain 87 d1jq4a_ not modelled 21.1 14 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin domains from multidomain proteins 88 d1vyra_ not modelled 20.6 31 Fold:TIM beta/alpha-barrel Superfamily:FMN-linked oxidoreductases Family:FMN-linked oxidoreductases 89 c3lzkC_ not modelled 20.5 44 PDB header:hydrolase Chain: C: PDB Molecule:fumarylacetoacetate hydrolase family protein; PDBTitle: the crystal structure of a probably aromatic amino acid2 degradation protein from sinorhizobium meliloti 1021 90 d1iyjb4 not modelled 19.7 26 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Single strand DNA-binding domain, SSB 91 d2iv2x1 not modelled 18.5 17 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 92 d2ff4a3 not modelled 18.2 22 Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain 93 d1uhta_ not modelled 17.5 25 Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain 94 d2f06a1 not modelled 17.2 8 Fold:Ferredoxin-like Superfamily:ACT-like Family:BT0572-like 95 d1k25a2 not modelled 17.2 11 Fold:Penicillin-binding protein 2x (pbp-2x), c-terminal domain Superfamily:Penicillin-binding protein 2x (pbp-2x), c-terminal domain Family:Penicillin-binding protein 2x (pbp-2x), c-terminal domain 96 d2q1ma1 not modelled 17.0 36 Fold:TNF-like Superfamily:TNF-like Family:TNF-like 97 d1i94q_ not modelled 16.7 42 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 98 d1t0ya_ not modelled 16.3 10 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 99 c1t0yA_ not modelled 16.3 10 PDB header:chaperone Chain: A: PDB Molecule:tubulin folding cofactor b; PDBTitle: solution structure of a ubiquitin-like domain from tubulin-2 binding cofactor b