30 c1tufA_ Probab=100.00  E-value=3.7e-38  Score=237.84  Aligned_columns=311  Identities=13%

Q ss_pred             CEEEEEEHHHHHHHHHHHHHHCCCCE-------EEEEEECCCCCCCHHHHHHHH--CCCCEEEECCHHHHHHHHHCCCC-
Q ss_conf             58999968889999999998579977-------999983087668888999983--78978998789999999984989-
Q batch____         4 PIQASLDLQALKQNLSIVRQAATHAR-------VWSVVKANAYGHGIERIWSAI--GATDGFALLNLEEAITLRERGWK-   73 (356)
Q Consensus         4 pt~leIdl~ai~~N~~~l~~~~~~~~-------i~~vvKanaYGhg~~~i~~~l--~g~~~f~va~~~Ea~~lr~~g~~-   73 (356)
                      |.++ +|+++|++|++.+++.+++..       +++.+|||+    ..++++.+  .|+ +|.|+|..|+..++++|++ 
T Consensus        31 P~~v-~d~~~i~~n~~~~~~~~~~~~~~~~~~~~~~a~Kan~----~~~i~~~l~~~G~-g~~v~S~~E~~~a~~~G~~~  104 (433)
T c1tufA_          31 PLYV-MSEEQIKINYNRYIEAFKRWEEETGKEFIVAYAYANA----NLAITRLLAKLGC-GADVVSGGELYIAKLSNVPS  104 (433)
T ss_dssp             SEEE-EEHHHHHHHHHHHHHHHTTHHHHSCCCEEEEEECCCC----CHHHHHHHHHTTC-EEEECSHHHHHHHHHTTCCG
T ss_pred             CEEE-EEHHHHHHHHHHHHHHHHHCCHHCCCEEEEEEEECCC----CHHHHHHHHHCCC-EEEEECHHHHHHHHHCCCCC
T ss_conf             8899-7399999999999998554101037506999862279----9999999997498-29981999999999849893


Q ss_pred             CEEEEECCCCCHHHHHHHHHCCC-EEEECCHHHHHHHHHHHC--CCCCEEEEEECCCC--------------CCCCCCHH
Q ss_conf             61999469989999999972597-799775899999887502--89856999971788--------------88888988
Q batch____        74 GPILMLEGFFHAQDLEIYDQHRL-TTCVHSNWQLKALQNARL--KAPLDIYLKVNSGM--------------NRLGFQPD  136 (356)
Q Consensus        74 ~~il~~~~~~~~~~~~~~~~~~~-~~~ids~~~l~~l~~~~~--~~~~~v~l~IDtGm--------------~R~G~~~~  136 (356)
                      .+|++.++.++.++++.+.+.+. .+++||.++++.+.+.+.  +.+.+|+|+||.|+              +|||++++
T Consensus       105 ~~i~~~gp~k~~~~l~~a~~~g~~~i~iDs~~el~~l~~~a~~~~~~~~v~iRvn~~~~~~~~~~~~tg~~~srfGi~~~  184 (433)
T c1tufA_         105 KKIVFNGNCKTKEEIIMGIEANIRAFNVDSISELILINETAKELGETANVAFRINPNVNPKTHPKISTGLKKNKFGLDVE  184 (433)
T ss_dssp             GGEEECCSCCCHHHHHHHHHTTCSEEEECCHHHHHHHHHHHHHHTCCEEEEEBEECCCCTTTSHHHHHHHHHSSCSEETT
T ss_pred             CEEEECCCCCCHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf             45999499999999999998798399988989999999998854997479999706898775211146887662014288


Q ss_pred             H--HHHHHHHHHCCCCCEEEEEECCCCCC-CCCCHHHHHHHHHHHHHHHC---CCCEEEECCHHHHCCCCCCCCEEEHHH
Q ss_conf             9--99999999718997499986668888-88201799999999998507---864676236787639422886610136
Q batch____       137 R--VLTVWQQLRAMANVGEMTLMSHFAEA-EHPDGISGAMARIEQAAEGL---ECRRSLSNSAATLWHPEAHFDWVRPGI  210 (356)
Q Consensus       137 e--~~~~~~~i~~~~~l~l~Gi~tHla~a-d~~~~~~~q~~~f~~~~~~l---~~~~hl~nS~~~l~~~~~~~d~vR~G~  210 (356)
                      +  +.+.++++.+++++++.|+++|+++. .+++...++++++.++.+.+   ....+..|.+|.+..+... ++.+++.
T Consensus       185 ~~~~~~~i~~~~~~~~l~l~Glh~H~gs~~~d~~~~~~~~~~~~~~~~~l~~~~~~~~~iniGGG~~~~~~~-~~~~~~~  263 (433)
T c1tufA_         185 SGIAMKAIKMALEMEYVNVVGVHCHIGSQLTDISPFIEETRKVMDFVVELKEEGIEIEDVNLGGGLGIPYYK-DKQIPTQ  263 (433)
T ss_dssp             TTHHHHHHHHHHTCSSEEECEEECCCCSSBCCHHHHHHHHHHHHHHHHHHHTTTCCCSEEECCCCBCCCCSS-SSCCCCH
T ss_pred             HHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCC-CCCCCCH
T ss_conf             878999999997269970999996338989898999999999999999998617997299816887867677-7668899


Q ss_pred             HHHCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEECCCCEECCCCEEECCCCEEEEEEECCCCCCCCCCCCCCCEEEECC
Q ss_conf             65085875222334567850579999986368981899714338628537980999982410058300078971699999
Q batch____       211 ILYGASPSGQWRDIANTGLRPVMTLSSEIIGVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGYPRHAPTGTPVLVDG  290 (356)
Q Consensus       211 ~lYG~~p~~~~~~~~~~~l~pv~~l~a~v~~i~~i~~G~~vgYg~~~~~~~~~~ia~i~iGyaDG~~r~~~~~~~v~i~g  290 (356)
                      ..|+.............  .+..++..+.-+...-+.|..+++....+...++++++++.||+|++++.+.+..+.++.+
T Consensus       264 ~~~~~~i~~~l~~~~~~--~~~~~l~~EpGr~lv~~ag~~vt~V~~vk~~~~~~~~~vd~G~~~~~~~~l~~~~~~i~~~  341 (433)
T c1tufA_         264 KDLADAIINTMLKYKDK--VEMPNLILEPGRSLVATAGYLLGKVHHIKETPVTKWVMIDAGMNDMMRPAMYEAYHHIINC  341 (433)
T ss_dssp             HHHHHHHHHHHHTTTTT--SCCCEEEECCSHHHHGGGEEEEEEEEEEEECSSCEEEEESCCTTTCCHHHHHCCCCCEEES
T ss_pred             HHHHHHHHHHHHHHCCC--CCCCEEEEEECCEEEECCCEEEEEEEEEEECCCEEEEEECCCCCCCCCHHHCCCCCEEEEC
T ss_conf             99999999999985023--7885799920205882682799998889943984999981843468487760863125414


Q ss_pred             ------EEEEEECCCCC--CCEEEECCCCCCCCCCCEEEEEC
Q ss_conf             ------99978513513--43889757976778887899987
Q batch____       291 ------VRTMTVGTVSM--DMLAVDLTPCPQAGIGTPVELWG  324 (356)
Q Consensus       291 ------~~~pivG~i~M--D~~~vdit~~~~v~~Gd~v~l~G  324 (356)
                            +++.|+|++||  |.++.|+. +|++++||.|++..
T Consensus       342 ~~~~~~~~~~I~G~~C~~~D~l~~~~~-lp~~~~GD~vvi~~  382 (433)
T c1tufA_         342 KVKNEKEVVSIAGGLCESSDVFGRDRE-LDKVEVGDVLAIFD  382 (433)
T ss_dssp             BCCSCEEEEEEECSSSCTTCEEEEEEE-EECCCTTCEEEECC
T ss_pred             CCCCCCEEEEEEECCCCCCCEEEEEEE-CCCCCCCCEEEEEC
T ss_conf             787880489998213368778762014-58888888999958