BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (185 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P0AEE1 Protein dcrB n=151 Tax=Bacteria RepID=DCRB_ECOLI 373 e-102 UniRef50_D2T9I4 Protein dcrB n=3 Tax=Erwinia RepID=D2T9I4_ERWPY 228 6e-59 UniRef50_D0Z8Z6 Putative uncharacterized protein n=2 Tax=Edwards... 183 3e-45 UniRef50_UPI0001A43E71 hypothetical protein PcarcW_21593 n=1 Tax... 138 1e-31 UniRef50_A8G7V8 Putative uncharacterized protein n=2 Tax=Serrati... 63 4e-09 UniRef50_Q4KEH0 Putative uncharacterized protein n=3 Tax=Pseudom... 52 1e-05 UniRef50_Q2KWU3 Putative exported protein n=1 Tax=Bordetella avi... 44 0.003 >UniRef50_P0AEE1 Protein dcrB n=151 Tax=Bacteria RepID=DCRB_ECOLI Length = 185 Score = 373 bits (957), Expect = e-102, Method: Compositional matrix adjust. Identities = 185/185 (100%), Positives = 185/185 (100%) Query: 1 MRNLVKYVGIGLLVMGLAACDDKDTNATAQGSVAESNATGNPVNLLDGKLSFSLPADMTD 60 MRNLVKYVGIGLLVMGLAACDDKDTNATAQGSVAESNATGNPVNLLDGKLSFSLPADMTD Sbjct: 1 MRNLVKYVGIGLLVMGLAACDDKDTNATAQGSVAESNATGNPVNLLDGKLSFSLPADMTD 60 Query: 61 QSGKLGTQANNMHVWSDATGQKAVIVIMGDDPKEDLAVLAKRLEDQQRSRDPQLQVVTNK 120 QSGKLGTQANNMHVWSDATGQKAVIVIMGDDPKEDLAVLAKRLEDQQRSRDPQLQVVTNK Sbjct: 61 QSGKLGTQANNMHVWSDATGQKAVIVIMGDDPKEDLAVLAKRLEDQQRSRDPQLQVVTNK 120 Query: 121 AIELKGHKMQQLDSIISAKGQTAYSSVILGNVGNQLLTMQITLPADDQQKAQTTAENIIN 180 AIELKGHKMQQLDSIISAKGQTAYSSVILGNVGNQLLTMQITLPADDQQKAQTTAENIIN Sbjct: 121 AIELKGHKMQQLDSIISAKGQTAYSSVILGNVGNQLLTMQITLPADDQQKAQTTAENIIN 180 Query: 181 TLVIQ 185 TLVIQ Sbjct: 181 TLVIQ 185 >UniRef50_D2T9I4 Protein dcrB n=3 Tax=Erwinia RepID=D2T9I4_ERWPY Length = 215 Score = 228 bits (582), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 113/185 (61%), Positives = 145/185 (78%), Gaps = 1/185 (0%) Query: 1 MRNLVKYVGIGLLVMGLAACDDKDTNATAQGSVAESNATGNPVNLLDGKLSFSLPADMTD 60 MRNL+KY GI +LV GLAACD + A V+ S + N V L+DGKLSF+LP M+D Sbjct: 32 MRNLLKYAGIAVLVTGLAACDGNNDKAADNQGVSSSQSAQN-VTLMDGKLSFALPPGMSD 90 Query: 61 QSGKLGTQANNMHVWSDATGQKAVIVIMGDDPKEDLAVLAKRLEDQQRSRDPQLQVVTNK 120 +SGKLGTQANNMHV++D +GQKA+IVI GD E L L +RLE QQRSRDPQLQVVTNK Sbjct: 91 KSGKLGTQANNMHVYADESGQKAIIVIEGDSSNEGLDTLTERLEAQQRSRDPQLQVVTNK 150 Query: 121 AIELKGHKMQQLDSIISAKGQTAYSSVILGNVGNQLLTMQITLPADDQQKAQTTAENIIN 180 I +K H++QQLDS+ISA Q+++SSV+LG + +LLT+QITLPAD+QQ+AQT AE+IIN Sbjct: 151 TISVKDHELQQLDSVISANNQSSWSSVVLGKIDGKLLTLQITLPADNQQQAQTEAESIIN 210 Query: 181 TLVIQ 185 ++ ++ Sbjct: 211 SITLK 215 >UniRef50_D0Z8Z6 Putative uncharacterized protein n=2 Tax=Edwardsiella RepID=D0Z8Z6_EDWTE Length = 191 Score = 183 bits (464), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 94/187 (50%), Positives = 136/187 (72%), Gaps = 5/187 (2%) Query: 1 MRNLVKYVGIGLLVMGLAACDDK---DTNATAQGSVA--ESNATGNPVNLLDGKLSFSLP 55 M NLVK +G+GLLV GLAACD +TNA AQG+ A S G V+LLDGK+ F+LP Sbjct: 1 MGNLVKLIGVGLLVTGLAACDGSSTAETNAPAQGASATQPSVPAGAKVSLLDGKIGFTLP 60 Query: 56 ADMTDQSGKLGTQANNMHVWSDATGQKAVIVIMGDDPKEDLAVLAKRLEDQQRSRDPQLQ 115 A ++DQ+ KLG+Q NNM V+++ TGQ+AVIVI+ P+++L L+ RL DQQ+SRD LQ Sbjct: 61 AGLSDQTSKLGSQTNNMSVYANKTGQQAVIVILAPMPQDNLNTLSTRLIDQQKSRDASLQ 120 Query: 116 VVTNKAIELKGHKMQQLDSIISAKGQTAYSSVILGNVGNQLLTMQITLPADDQQKAQTTA 175 +V++++++L G ++++ S+ A G YSS+IL VG+QL+TMQI+LP D++Q+A A Sbjct: 121 LVSSESVKLGGKDVEKVVSMQQANGHAIYSSIILAQVGDQLMTMQISLPGDNRQEAANIA 180 Query: 176 ENIINTL 182 ++NTL Sbjct: 181 NGVLNTL 187 >UniRef50_UPI0001A43E71 hypothetical protein PcarcW_21593 n=1 Tax=Pectobacterium carotovorum subsp. carotovorum WPP14 RepID=UPI0001A43E71 Length = 194 Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 76/129 (58%), Positives = 102/129 (79%), Gaps = 5/129 (3%) Query: 1 MRNLVKYVGIGLLVMGLAACDDKDTNATAQGS----VAESNATGNPVNLLDGKLSFSLPA 56 M N++KY+G+GLLV LAACD K +A G+ AE++A G + L++GK++F+LPA Sbjct: 1 MSNVIKYLGVGLLVGLLAACDGKTDDAAKSGAQDKPAAEASA-GQNIELMNGKVAFTLPA 59 Query: 57 DMTDQSGKLGTQANNMHVWSDATGQKAVIVIMGDDPKEDLAVLAKRLEDQQRSRDPQLQV 116 DM DQSGK+GTQANNMHV+++ GQKAVIVI+GD+ E+L VLA+RLEDQQR+RD LQV Sbjct: 60 DMRDQSGKVGTQANNMHVYANDNGQKAVIVILGDNTTEELTVLAQRLEDQQRTRDANLQV 119 Query: 117 VTNKAIELK 125 VTNK I+++ Sbjct: 120 VTNKTIDVE 128 >UniRef50_A8G7V8 Putative uncharacterized protein n=2 Tax=Serratia RepID=A8G7V8_SERP5 Length = 215 Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 33/215 (15%) Query: 1 MRNLVKYVGIGLLVMGLAACDDKD---------------TNATAQGSVAESNATGNP--- 42 ++ + K+ + +L +GLAACD+KD T V E+ P Sbjct: 2 LKTIAKFTAVAVLAIGLAACDNKDDTKPEVPKPDTKPVVTQPAPTPPVVETKPAPPPGLK 61 Query: 43 VNLLDGKLSFSLPADMTDQ---SGKLGTQANNMHVWSDATGQKAVI---VIMGDDPKEDL 96 V++ GK++F LP+ +DQ SG + + + + D +++ + VI DD K L Sbjct: 62 VSMQKGKITFELPSGFSDQTENSGIINDSKSTIQRFLDGKSRQSTVSSEVIPPDDMK--L 119 Query: 97 AVLAKRLEDQQRS-------RDPQLQVVTNKAIELKGHKMQQLDSIISAKGQTAYSSVIL 149 K L+D +S R +Q + + K +++D+ S GQ S+++L Sbjct: 120 NSSDKMLKDLTQSMITELADRYQNIQTTKEENFTVGKQKFRRVDTEQSINGQKVVSTIML 179 Query: 150 GNVGNQLLTMQITLPADDQQKAQTTAENIINTLVI 184 + +++T+Q+ PA + Q + II+TL + Sbjct: 180 TVLNKRVVTLQMLSPAKTPEAHQALVQQIIDTLTV 214 >UniRef50_Q4KEH0 Putative uncharacterized protein n=3 Tax=Pseudomonas fluorescens RepID=Q4KEH0_PSEF5 Length = 192 Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 48/169 (28%), Positives = 73/169 (43%), Gaps = 19/169 (11%) Query: 14 VMGLAACDDKDTNATAQGSVAESNATGNPVNLLDGKLSFSLPADMTDQSGKLGTQANNMH 73 V GL A NA A A A+G V +LDGKL+F+LP + G++AN Sbjct: 16 VAGLGAL-----NAVAASKSAARQASGEKVAVLDGKLAFTLPKGFSASVLPAGSEANGTE 70 Query: 74 -----VWSDATGQKAVIVIMGDDPK------EDLAVL---AKRLEDQQRSRDPQLQVVTN 119 ++S+AT + VI P D A L QQ + P + Sbjct: 71 GASGTLYSNATTRTVVIAAQNTIPHGAKVQDNDAAFLDDAVSGFLAQQAAALPDFSKQSE 130 Query: 120 KAIELKGHKMQQLDSIISAKGQTAYSSVILGNVGNQLLTMQITLPADDQ 168 K + LKG ++Q+DS + G +S ++ G ++ +QI A D+ Sbjct: 131 KNMTLKGLGVRQIDSTATMGGGLTLNSTLIAGSGTRMAVIQIISRATDK 179 >UniRef50_Q2KWU3 Putative exported protein n=1 Tax=Bordetella avium 197N RepID=Q2KWU3_BORA1 Length = 187 Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust. Identities = 42/185 (22%), Positives = 79/185 (42%), Gaps = 28/185 (15%) Query: 1 MRNLVKYVGIGLLVMGLAACDDKDTNATAQGSVAESNATGNPV----NLLDGKLSFSLPA 56 MR L+ + + L + A + NA G P LL GKL+F+LP Sbjct: 1 MRRLLPSLALSLFAL------------NAHSAPPSQNAPGQPAAMQATLLQGKLTFNLPE 48 Query: 57 DMTDQ---SGKL--GTQANNMHVWSDATGQKAVIVIMG-------DDPKEDLAVLAKRLE 104 + +G+ GT + +++++ ++ V+V DD K L+ A+ Sbjct: 49 GFNARELPAGRTEEGTAGASGNIYANPQTRQIVVVAEAPVSDDATDDDKRFLSHAAQGYV 108 Query: 105 DQQRSRDPQLQVVTNKAIELKGHKMQQLDSIISAKGQTAYSSVILGNVGNQLLTMQITLP 164 QQ+ P +V + I++KG + ++D+ + G + ++ L G +L +Q+ Sbjct: 109 RQQKQAAPDYRVTKEETIQIKGMNVHRIDATGTFAGSLSQNTSFLTRSGPRLGVVQVVSR 168 Query: 165 ADDQQ 169 D Q Sbjct: 169 ESDAQ 173 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0AEE1 Protein dcrB n=151 Tax=Bacteria RepID=DCRB_ECOLI 243 2e-63 UniRef50_D2T9I4 Protein dcrB n=3 Tax=Erwinia RepID=D2T9I4_ERWPY 228 9e-59 UniRef50_D0Z8Z6 Putative uncharacterized protein n=2 Tax=Edwards... 201 6e-51 UniRef50_A8G7V8 Putative uncharacterized protein n=2 Tax=Serrati... 180 2e-44 UniRef50_UPI0001A43E71 hypothetical protein PcarcW_21593 n=1 Tax... 141 8e-33 UniRef50_Q4KEH0 Putative uncharacterized protein n=3 Tax=Pseudom... 139 4e-32 Sequences not found previously or not previously below threshold: UniRef50_Q2KWU3 Putative exported protein n=1 Tax=Bordetella avi... 94 2e-18 UniRef50_Q48LH6 Putative uncharacterized protein n=6 Tax=Pseudom... 79 9e-14 UniRef50_B7XMB4 Putative uncharacterized protein n=1 Tax=Enteroc... 68 2e-10 >UniRef50_P0AEE1 Protein dcrB n=151 Tax=Bacteria RepID=DCRB_ECOLI Length = 185 Score = 243 bits (621), Expect = 2e-63, Method: Composition-based stats. Identities = 185/185 (100%), Positives = 185/185 (100%) Query: 1 MRNLVKYVGIGLLVMGLAACDDKDTNATAQGSVAESNATGNPVNLLDGKLSFSLPADMTD 60 MRNLVKYVGIGLLVMGLAACDDKDTNATAQGSVAESNATGNPVNLLDGKLSFSLPADMTD Sbjct: 1 MRNLVKYVGIGLLVMGLAACDDKDTNATAQGSVAESNATGNPVNLLDGKLSFSLPADMTD 60 Query: 61 QSGKLGTQANNMHVWSDATGQKAVIVIMGDDPKEDLAVLAKRLEDQQRSRDPQLQVVTNK 120 QSGKLGTQANNMHVWSDATGQKAVIVIMGDDPKEDLAVLAKRLEDQQRSRDPQLQVVTNK Sbjct: 61 QSGKLGTQANNMHVWSDATGQKAVIVIMGDDPKEDLAVLAKRLEDQQRSRDPQLQVVTNK 120 Query: 121 AIELKGHKMQQLDSIISAKGQTAYSSVILGNVGNQLLTMQITLPADDQQKAQTTAENIIN 180 AIELKGHKMQQLDSIISAKGQTAYSSVILGNVGNQLLTMQITLPADDQQKAQTTAENIIN Sbjct: 121 AIELKGHKMQQLDSIISAKGQTAYSSVILGNVGNQLLTMQITLPADDQQKAQTTAENIIN 180 Query: 181 TLVIQ 185 TLVIQ Sbjct: 181 TLVIQ 185 >UniRef50_D2T9I4 Protein dcrB n=3 Tax=Erwinia RepID=D2T9I4_ERWPY Length = 215 Score = 228 bits (580), Expect = 9e-59, Method: Composition-based stats. Identities = 113/185 (61%), Positives = 145/185 (78%), Gaps = 1/185 (0%) Query: 1 MRNLVKYVGIGLLVMGLAACDDKDTNATAQGSVAESNATGNPVNLLDGKLSFSLPADMTD 60 MRNL+KY GI +LV GLAACD + A V+ S + N V L+DGKLSF+LP M+D Sbjct: 32 MRNLLKYAGIAVLVTGLAACDGNNDKAADNQGVSSSQSAQN-VTLMDGKLSFALPPGMSD 90 Query: 61 QSGKLGTQANNMHVWSDATGQKAVIVIMGDDPKEDLAVLAKRLEDQQRSRDPQLQVVTNK 120 +SGKLGTQANNMHV++D +GQKA+IVI GD E L L +RLE QQRSRDPQLQVVTNK Sbjct: 91 KSGKLGTQANNMHVYADESGQKAIIVIEGDSSNEGLDTLTERLEAQQRSRDPQLQVVTNK 150 Query: 121 AIELKGHKMQQLDSIISAKGQTAYSSVILGNVGNQLLTMQITLPADDQQKAQTTAENIIN 180 I +K H++QQLDS+ISA Q+++SSV+LG + +LLT+QITLPAD+QQ+AQT AE+IIN Sbjct: 151 TISVKDHELQQLDSVISANNQSSWSSVVLGKIDGKLLTLQITLPADNQQQAQTEAESIIN 210 Query: 181 TLVIQ 185 ++ ++ Sbjct: 211 SITLK 215 >UniRef50_D0Z8Z6 Putative uncharacterized protein n=2 Tax=Edwardsiella RepID=D0Z8Z6_EDWTE Length = 191 Score = 201 bits (512), Expect = 6e-51, Method: Composition-based stats. Identities = 94/188 (50%), Positives = 136/188 (72%), Gaps = 5/188 (2%) Query: 1 MRNLVKYVGIGLLVMGLAACDDK---DTNATAQGSVA--ESNATGNPVNLLDGKLSFSLP 55 M NLVK +G+GLLV GLAACD +TNA AQG+ A S G V+LLDGK+ F+LP Sbjct: 1 MGNLVKLIGVGLLVTGLAACDGSSTAETNAPAQGASATQPSVPAGAKVSLLDGKIGFTLP 60 Query: 56 ADMTDQSGKLGTQANNMHVWSDATGQKAVIVIMGDDPKEDLAVLAKRLEDQQRSRDPQLQ 115 A ++DQ+ KLG+Q NNM V+++ TGQ+AVIVI+ P+++L L+ RL DQQ+SRD LQ Sbjct: 61 AGLSDQTSKLGSQTNNMSVYANKTGQQAVIVILAPMPQDNLNTLSTRLIDQQKSRDASLQ 120 Query: 116 VVTNKAIELKGHKMQQLDSIISAKGQTAYSSVILGNVGNQLLTMQITLPADDQQKAQTTA 175 +V++++++L G ++++ S+ A G YSS+IL VG+QL+TMQI+LP D++Q+A A Sbjct: 121 LVSSESVKLGGKDVEKVVSMQQANGHAIYSSIILAQVGDQLMTMQISLPGDNRQEAANIA 180 Query: 176 ENIINTLV 183 ++NTL Sbjct: 181 NGVLNTLS 188 >UniRef50_A8G7V8 Putative uncharacterized protein n=2 Tax=Serratia RepID=A8G7V8_SERP5 Length = 215 Score = 180 bits (456), Expect = 2e-44, Method: Composition-based stats. Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 33/215 (15%) Query: 1 MRNLVKYVGIGLLVMGLAACDDKD---------------TNATAQGSVAESNATGNP--- 42 ++ + K+ + +L +GLAACD+KD T V E+ P Sbjct: 2 LKTIAKFTAVAVLAIGLAACDNKDDTKPEVPKPDTKPVVTQPAPTPPVVETKPAPPPGLK 61 Query: 43 VNLLDGKLSFSLPADMTDQ---SGKLGTQANNMHVWSDATGQKAVI---VIMGDDPKEDL 96 V++ GK++F LP+ +DQ SG + + + + D +++ + VI DD K L Sbjct: 62 VSMQKGKITFELPSGFSDQTENSGIINDSKSTIQRFLDGKSRQSTVSSEVIPPDDMK--L 119 Query: 97 AVLAKRLEDQQRS-------RDPQLQVVTNKAIELKGHKMQQLDSIISAKGQTAYSSVIL 149 K L+D +S R +Q + + K +++D+ S GQ S+++L Sbjct: 120 NSSDKMLKDLTQSMITELADRYQNIQTTKEENFTVGKQKFRRVDTEQSINGQKVVSTIML 179 Query: 150 GNVGNQLLTMQITLPADDQQKAQTTAENIINTLVI 184 + +++T+Q+ PA + Q + II+TL + Sbjct: 180 TVLNKRVVTLQMLSPAKTPEAHQALVQQIIDTLTV 214 >UniRef50_UPI0001A43E71 hypothetical protein PcarcW_21593 n=1 Tax=Pectobacterium carotovorum subsp. carotovorum WPP14 RepID=UPI0001A43E71 Length = 194 Score = 141 bits (356), Expect = 8e-33, Method: Composition-based stats. Identities = 74/131 (56%), Positives = 100/131 (76%), Gaps = 3/131 (2%) Query: 1 MRNLVKYVGIGLLVMGLAACDDKDTNATAQGSV---AESNATGNPVNLLDGKLSFSLPAD 57 M N++KY+G+GLLV LAACD K +A G+ A + G + L++GK++F+LPAD Sbjct: 1 MSNVIKYLGVGLLVGLLAACDGKTDDAAKSGAQDKPAAEASAGQNIELMNGKVAFTLPAD 60 Query: 58 MTDQSGKLGTQANNMHVWSDATGQKAVIVIMGDDPKEDLAVLAKRLEDQQRSRDPQLQVV 117 M DQSGK+GTQANNMHV+++ GQKAVIVI+GD+ E+L VLA+RLEDQQR+RD LQVV Sbjct: 61 MRDQSGKVGTQANNMHVYANDNGQKAVIVILGDNTTEELTVLAQRLEDQQRTRDANLQVV 120 Query: 118 TNKAIELKGHK 128 TNK I+++ + Sbjct: 121 TNKTIDVERQE 131 >UniRef50_Q4KEH0 Putative uncharacterized protein n=3 Tax=Pseudomonas fluorescens RepID=Q4KEH0_PSEF5 Length = 192 Score = 139 bits (350), Expect = 4e-32, Method: Composition-based stats. Identities = 49/180 (27%), Positives = 76/180 (42%), Gaps = 19/180 (10%) Query: 14 VMGLAACDDKDTNATAQGSVAESNATGNPVNLLDGKLSFSLPADMTDQSGKLGTQANNMH 73 V GL A NA A A A+G V +LDGKL+F+LP + G++AN Sbjct: 16 VAGLGAL-----NAVAASKSAARQASGEKVAVLDGKLAFTLPKGFSASVLPAGSEANGTE 70 Query: 74 -----VWSDATGQKAVIVIMGDDPK------EDLAVLA---KRLEDQQRSRDPQLQVVTN 119 ++S+AT + VI P D A L QQ + P + Sbjct: 71 GASGTLYSNATTRTVVIAAQNTIPHGAKVQDNDAAFLDDAVSGFLAQQAAALPDFSKQSE 130 Query: 120 KAIELKGHKMQQLDSIISAKGQTAYSSVILGNVGNQLLTMQITLPADDQQKAQTTAENII 179 K + LKG ++Q+DS + G +S ++ G ++ +QI A D+ + I+ Sbjct: 131 KNMTLKGLGVRQIDSTATMGGGLTLNSTLIAGSGTRMAVIQIISRATDKAGHTALMKQIL 190 >UniRef50_Q2KWU3 Putative exported protein n=1 Tax=Bordetella avium 197N RepID=Q2KWU3_BORA1 Length = 187 Score = 94.1 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 67/168 (39%), Gaps = 12/168 (7%) Query: 24 DTNATAQGSVAESNATGNPVNLLDGKLSFSLPADMTDQSGKLGTQANNM-----HVWSDA 78 + ++ A LL GKL+F+LP + G +++++ Sbjct: 16 NAHSAPPSQNAPGQPAAMQATLLQGKLTFNLPEGFNARELPAGRTEEGTAGASGNIYANP 75 Query: 79 TGQKAVIVIMG-------DDPKEDLAVLAKRLEDQQRSRDPQLQVVTNKAIELKGHKMQQ 131 ++ V+V DD K L+ A+ QQ+ P +V + I++KG + + Sbjct: 76 QTRQIVVVAEAPVSDDATDDDKRFLSHAAQGYVRQQKQAAPDYRVTKEETIQIKGMNVHR 135 Query: 132 LDSIISAKGQTAYSSVILGNVGNQLLTMQITLPADDQQKAQTTAENII 179 +D+ + G + ++ L G +L +Q+ D Q + ++ Sbjct: 136 IDATGTFAGSLSQNTSFLTRSGPRLGVVQVVSRESDAQGHADLVQRVL 183 >UniRef50_Q48LH6 Putative uncharacterized protein n=6 Tax=Pseudomonas syringae group RepID=Q48LH6_PSE14 Length = 233 Score = 78.7 bits (192), Expect = 9e-14, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 75/185 (40%), Gaps = 17/185 (9%) Query: 12 LLVMGLAACDD--KDTNATAQGSVAESNATGNPVNLLDGKLSFSLPAD-----MTDQSGK 64 ++ + LAAC AT + A + A +LL GKL+F++PA M + K Sbjct: 47 VVCVALAACQSMVSVQAATKPQAAAPAAAAVQKASLLGGKLAFTIPAGYVQGEMPEIDAK 106 Query: 65 LGTQANNMHVWSDATGQKAVIVIMGDDPKED---------LAVLAKRLEDQQRSRDPQLQ 115 Q ++++A ++ +IV P L L + QQ + + Sbjct: 107 AKAQGVTGALYTNAAEKRVLIVTETPMPMGVQASDNDGVVLDGLVTGILAQQSTGYKDFK 166 Query: 116 VVTNKAIELK-GHKMQQLDSIISAKGQTAYSSVILGNVGNQLLTMQITLPADDQQKAQTT 174 + +K I K G ++QLD+ + S+ I+ G + + + A + ++ Sbjct: 167 KLGDKKIVKKNGLGVRQLDTSATMSDAQVLSTSIIAASGARAAVLNVVSNAKNPKEHAAL 226 Query: 175 AENII 179 + +I Sbjct: 227 VKAVI 231 >UniRef50_B7XMB4 Putative uncharacterized protein n=1 Tax=Enterocytozoon bieneusi H348 RepID=B7XMB4_ENTBH Length = 160 Score = 67.5 bits (163), Expect = 2e-10, Method: Composition-based stats. Identities = 29/159 (18%), Positives = 65/159 (40%), Gaps = 10/159 (6%) Query: 27 ATAQGSVAESNATGNPVNLLDGKLSFSLPADMTDQSGKLGTQANNMHVWSDATGQKAVIV 86 A A + + V+L+ GKL F L + ++ N ++ D ++A+IV Sbjct: 4 AAPPEETATAASDTQSVSLVGGKLKFVL-KGVEARTL---NSENGGTMYFDPKSERAIIV 59 Query: 87 IMGDDPKEDLA------VLAKRLEDQQRSRDPQLQVVTNKAIELKGHKMQQLDSIISAKG 140 G P + ++++Q++ P ++ + K I++ G KM +LD G Sbjct: 60 TEGPAPTAGTTPDAAFRLAVDTVKEKQQAASPNFRMTSEKTIQVNGLKMYRLDGTDDFNG 119 Query: 141 QTAYSSVILGNVGNQLLTMQITLPADDQQKAQTTAENII 179 + ++ ++ +++ +D +NI+ Sbjct: 120 LKLLMASLMTMNDQKITIIEVMSSVNDPAGHTAALKNIL 158 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0AEE1 Protein dcrB n=151 Tax=Bacteria RepID=DCRB_ECOLI 214 1e-54 UniRef50_D2T9I4 Protein dcrB n=3 Tax=Erwinia RepID=D2T9I4_ERWPY 205 5e-52 UniRef50_D0Z8Z6 Putative uncharacterized protein n=2 Tax=Edwards... 179 3e-44 UniRef50_Q2KWU3 Putative exported protein n=1 Tax=Bordetella avi... 161 7e-39 UniRef50_A8G7V8 Putative uncharacterized protein n=2 Tax=Serrati... 161 1e-38 UniRef50_B7XMB4 Putative uncharacterized protein n=1 Tax=Enteroc... 138 7e-32 UniRef50_Q4KEH0 Putative uncharacterized protein n=3 Tax=Pseudom... 135 6e-31 UniRef50_Q48LH6 Putative uncharacterized protein n=6 Tax=Pseudom... 135 8e-31 UniRef50_UPI0001A43E71 hypothetical protein PcarcW_21593 n=1 Tax... 129 4e-29 Sequences not found previously or not previously below threshold: CONVERGED! >UniRef50_P0AEE1 Protein dcrB n=151 Tax=Bacteria RepID=DCRB_ECOLI Length = 185 Score = 214 bits (544), Expect = 1e-54, Method: Composition-based stats. Identities = 185/185 (100%), Positives = 185/185 (100%) Query: 1 MRNLVKYVGIGLLVMGLAACDDKDTNATAQGSVAESNATGNPVNLLDGKLSFSLPADMTD 60 MRNLVKYVGIGLLVMGLAACDDKDTNATAQGSVAESNATGNPVNLLDGKLSFSLPADMTD Sbjct: 1 MRNLVKYVGIGLLVMGLAACDDKDTNATAQGSVAESNATGNPVNLLDGKLSFSLPADMTD 60 Query: 61 QSGKLGTQANNMHVWSDATGQKAVIVIMGDDPKEDLAVLAKRLEDQQRSRDPQLQVVTNK 120 QSGKLGTQANNMHVWSDATGQKAVIVIMGDDPKEDLAVLAKRLEDQQRSRDPQLQVVTNK Sbjct: 61 QSGKLGTQANNMHVWSDATGQKAVIVIMGDDPKEDLAVLAKRLEDQQRSRDPQLQVVTNK 120 Query: 121 AIELKGHKMQQLDSIISAKGQTAYSSVILGNVGNQLLTMQITLPADDQQKAQTTAENIIN 180 AIELKGHKMQQLDSIISAKGQTAYSSVILGNVGNQLLTMQITLPADDQQKAQTTAENIIN Sbjct: 121 AIELKGHKMQQLDSIISAKGQTAYSSVILGNVGNQLLTMQITLPADDQQKAQTTAENIIN 180 Query: 181 TLVIQ 185 TLVIQ Sbjct: 181 TLVIQ 185 >UniRef50_D2T9I4 Protein dcrB n=3 Tax=Erwinia RepID=D2T9I4_ERWPY Length = 215 Score = 205 bits (522), Expect = 5e-52, Method: Composition-based stats. Identities = 112/185 (60%), Positives = 144/185 (77%), Gaps = 1/185 (0%) Query: 1 MRNLVKYVGIGLLVMGLAACDDKDTNATAQGSVAESNATGNPVNLLDGKLSFSLPADMTD 60 MRNL+KY GI +LV GLAACD + A V+ S + V L+DGKLSF+LP M+D Sbjct: 32 MRNLLKYAGIAVLVTGLAACDGNNDKAADNQGVSSSQSA-QNVTLMDGKLSFALPPGMSD 90 Query: 61 QSGKLGTQANNMHVWSDATGQKAVIVIMGDDPKEDLAVLAKRLEDQQRSRDPQLQVVTNK 120 +SGKLGTQANNMHV++D +GQKA+IVI GD E L L +RLE QQRSRDPQLQVVTNK Sbjct: 91 KSGKLGTQANNMHVYADESGQKAIIVIEGDSSNEGLDTLTERLEAQQRSRDPQLQVVTNK 150 Query: 121 AIELKGHKMQQLDSIISAKGQTAYSSVILGNVGNQLLTMQITLPADDQQKAQTTAENIIN 180 I +K H++QQLDS+ISA Q+++SSV+LG + +LLT+QITLPAD+QQ+AQT AE+IIN Sbjct: 151 TISVKDHELQQLDSVISANNQSSWSSVVLGKIDGKLLTLQITLPADNQQQAQTEAESIIN 210 Query: 181 TLVIQ 185 ++ ++ Sbjct: 211 SITLK 215 >UniRef50_D0Z8Z6 Putative uncharacterized protein n=2 Tax=Edwardsiella RepID=D0Z8Z6_EDWTE Length = 191 Score = 179 bits (454), Expect = 3e-44, Method: Composition-based stats. Identities = 94/188 (50%), Positives = 136/188 (72%), Gaps = 5/188 (2%) Query: 1 MRNLVKYVGIGLLVMGLAACDDK---DTNATAQGSVA--ESNATGNPVNLLDGKLSFSLP 55 M NLVK +G+GLLV GLAACD +TNA AQG+ A S G V+LLDGK+ F+LP Sbjct: 1 MGNLVKLIGVGLLVTGLAACDGSSTAETNAPAQGASATQPSVPAGAKVSLLDGKIGFTLP 60 Query: 56 ADMTDQSGKLGTQANNMHVWSDATGQKAVIVIMGDDPKEDLAVLAKRLEDQQRSRDPQLQ 115 A ++DQ+ KLG+Q NNM V+++ TGQ+AVIVI+ P+++L L+ RL DQQ+SRD LQ Sbjct: 61 AGLSDQTSKLGSQTNNMSVYANKTGQQAVIVILAPMPQDNLNTLSTRLIDQQKSRDASLQ 120 Query: 116 VVTNKAIELKGHKMQQLDSIISAKGQTAYSSVILGNVGNQLLTMQITLPADDQQKAQTTA 175 +V++++++L G ++++ S+ A G YSS+IL VG+QL+TMQI+LP D++Q+A A Sbjct: 121 LVSSESVKLGGKDVEKVVSMQQANGHAIYSSIILAQVGDQLMTMQISLPGDNRQEAANIA 180 Query: 176 ENIINTLV 183 ++NTL Sbjct: 181 NGVLNTLS 188 >UniRef50_Q2KWU3 Putative exported protein n=1 Tax=Bordetella avium 197N RepID=Q2KWU3_BORA1 Length = 187 Score = 161 bits (408), Expect = 7e-39, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 66/168 (39%), Gaps = 12/168 (7%) Query: 24 DTNATAQGSVAESNATGNPVNLLDGKLSFSLPADMTDQSGKLGTQANN-----MHVWSDA 78 + ++ A LL GKL+F+LP + G +++++ Sbjct: 16 NAHSAPPSQNAPGQPAAMQATLLQGKLTFNLPEGFNARELPAGRTEEGTAGASGNIYANP 75 Query: 79 TGQKAVIVIMGD-------DPKEDLAVLAKRLEDQQRSRDPQLQVVTNKAIELKGHKMQQ 131 ++ V+V D K L+ A+ QQ+ P +V + I++KG + + Sbjct: 76 QTRQIVVVAEAPVSDDATDDDKRFLSHAAQGYVRQQKQAAPDYRVTKEETIQIKGMNVHR 135 Query: 132 LDSIISAKGQTAYSSVILGNVGNQLLTMQITLPADDQQKAQTTAENII 179 +D+ + G + ++ L G +L +Q+ D Q + ++ Sbjct: 136 IDATGTFAGSLSQNTSFLTRSGPRLGVVQVVSRESDAQGHADLVQRVL 183 >UniRef50_A8G7V8 Putative uncharacterized protein n=2 Tax=Serratia RepID=A8G7V8_SERP5 Length = 215 Score = 161 bits (407), Expect = 1e-38, Method: Composition-based stats. Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 33/215 (15%) Query: 1 MRNLVKYVGIGLLVMGLAACDDKD---------------TNATAQGSVAESNATGNP--- 42 ++ + K+ + +L +GLAACD+KD T V E+ P Sbjct: 2 LKTIAKFTAVAVLAIGLAACDNKDDTKPEVPKPDTKPVVTQPAPTPPVVETKPAPPPGLK 61 Query: 43 VNLLDGKLSFSLPADMTDQ---SGKLGTQANNMHVWSDATGQKAVI---VIMGDDPKEDL 96 V++ GK++F LP+ +DQ SG + + + + D +++ + VI DD K L Sbjct: 62 VSMQKGKITFELPSGFSDQTENSGIINDSKSTIQRFLDGKSRQSTVSSEVIPPDDMK--L 119 Query: 97 AVLAKRLEDQQRS-------RDPQLQVVTNKAIELKGHKMQQLDSIISAKGQTAYSSVIL 149 K L+D +S R +Q + + K +++D+ S GQ S+++L Sbjct: 120 NSSDKMLKDLTQSMITELADRYQNIQTTKEENFTVGKQKFRRVDTEQSINGQKVVSTIML 179 Query: 150 GNVGNQLLTMQITLPADDQQKAQTTAENIINTLVI 184 + +++T+Q+ PA + Q + II+TL + Sbjct: 180 TVLNKRVVTLQMLSPAKTPEAHQALVQQIIDTLTV 214 >UniRef50_B7XMB4 Putative uncharacterized protein n=1 Tax=Enterocytozoon bieneusi H348 RepID=B7XMB4_ENTBH Length = 160 Score = 138 bits (348), Expect = 7e-32, Method: Composition-based stats. Identities = 29/159 (18%), Positives = 65/159 (40%), Gaps = 10/159 (6%) Query: 27 ATAQGSVAESNATGNPVNLLDGKLSFSLPADMTDQSGKLGTQANNMHVWSDATGQKAVIV 86 A A + + V+L+ GKL F L + ++ N ++ D ++A+IV Sbjct: 4 AAPPEETATAASDTQSVSLVGGKLKFVL-KGVEARTL---NSENGGTMYFDPKSERAIIV 59 Query: 87 IMGDDPKEDLA------VLAKRLEDQQRSRDPQLQVVTNKAIELKGHKMQQLDSIISAKG 140 G P + ++++Q++ P ++ + K I++ G KM +LD G Sbjct: 60 TEGPAPTAGTTPDAAFRLAVDTVKEKQQAASPNFRMTSEKTIQVNGLKMYRLDGTDDFNG 119 Query: 141 QTAYSSVILGNVGNQLLTMQITLPADDQQKAQTTAENII 179 + ++ ++ +++ +D +NI+ Sbjct: 120 LKLLMASLMTMNDQKITIIEVMSSVNDPAGHTAALKNIL 158 >UniRef50_Q4KEH0 Putative uncharacterized protein n=3 Tax=Pseudomonas fluorescens RepID=Q4KEH0_PSEF5 Length = 192 Score = 135 bits (340), Expect = 6e-31, Method: Composition-based stats. Identities = 47/180 (26%), Positives = 74/180 (41%), Gaps = 19/180 (10%) Query: 14 VMGLAACDDKDTNATAQGSVAESNATGNPVNLLDGKLSFSLPADMTDQSGKLGTQANNMH 73 V GL A NA A A A+G V +LDGKL+F+LP + G++AN Sbjct: 16 VAGLGAL-----NAVAASKSAARQASGEKVAVLDGKLAFTLPKGFSASVLPAGSEANGTE 70 Query: 74 -----VWSDATGQKAVIVIMGDDPKE---------DLAVLAKRLEDQQRSRDPQLQVVTN 119 ++S+AT + VI P L QQ + P + Sbjct: 71 GASGTLYSNATTRTVVIAAQNTIPHGAKVQDNDAAFLDDAVSGFLAQQAAALPDFSKQSE 130 Query: 120 KAIELKGHKMQQLDSIISAKGQTAYSSVILGNVGNQLLTMQITLPADDQQKAQTTAENII 179 K + LKG ++Q+DS + G +S ++ G ++ +QI A D+ + I+ Sbjct: 131 KNMTLKGLGVRQIDSTATMGGGLTLNSTLIAGSGTRMAVIQIISRATDKAGHTALMKQIL 190 >UniRef50_Q48LH6 Putative uncharacterized protein n=6 Tax=Pseudomonas syringae group RepID=Q48LH6_PSE14 Length = 233 Score = 135 bits (339), Expect = 8e-31, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 75/185 (40%), Gaps = 17/185 (9%) Query: 12 LLVMGLAACDD--KDTNATAQGSVAESNATGNPVNLLDGKLSFSLPAD-----MTDQSGK 64 ++ + LAAC AT + A + A +LL GKL+F++PA M + K Sbjct: 47 VVCVALAACQSMVSVQAATKPQAAAPAAAAVQKASLLGGKLAFTIPAGYVQGEMPEIDAK 106 Query: 65 LGTQANNMHVWSDATGQKAVIVIMGDDPKED---------LAVLAKRLEDQQRSRDPQLQ 115 Q ++++A ++ +IV P L L + QQ + + Sbjct: 107 AKAQGVTGALYTNAAEKRVLIVTETPMPMGVQASDNDGVVLDGLVTGILAQQSTGYKDFK 166 Query: 116 VVTNKAIELK-GHKMQQLDSIISAKGQTAYSSVILGNVGNQLLTMQITLPADDQQKAQTT 174 + +K I K G ++QLD+ + S+ I+ G + + + A + ++ Sbjct: 167 KLGDKKIVKKNGLGVRQLDTSATMSDAQVLSTSIIAASGARAAVLNVVSNAKNPKEHAAL 226 Query: 175 AENII 179 + +I Sbjct: 227 VKAVI 231 >UniRef50_UPI0001A43E71 hypothetical protein PcarcW_21593 n=1 Tax=Pectobacterium carotovorum subsp. carotovorum WPP14 RepID=UPI0001A43E71 Length = 194 Score = 129 bits (325), Expect = 4e-29, Method: Composition-based stats. Identities = 74/131 (56%), Positives = 100/131 (76%), Gaps = 3/131 (2%) Query: 1 MRNLVKYVGIGLLVMGLAACDDKDTNATAQGSV---AESNATGNPVNLLDGKLSFSLPAD 57 M N++KY+G+GLLV LAACD K +A G+ A + G + L++GK++F+LPAD Sbjct: 1 MSNVIKYLGVGLLVGLLAACDGKTDDAAKSGAQDKPAAEASAGQNIELMNGKVAFTLPAD 60 Query: 58 MTDQSGKLGTQANNMHVWSDATGQKAVIVIMGDDPKEDLAVLAKRLEDQQRSRDPQLQVV 117 M DQSGK+GTQANNMHV+++ GQKAVIVI+GD+ E+L VLA+RLEDQQR+RD LQVV Sbjct: 61 MRDQSGKVGTQANNMHVYANDNGQKAVIVILGDNTTEELTVLAQRLEDQQRTRDANLQVV 120 Query: 118 TNKAIELKGHK 128 TNK I+++ + Sbjct: 121 TNKTIDVERQE 131 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.302 0.124 0.268 Lambda K H 0.267 0.0380 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 631,681,633 Number of Sequences: 3077464 Number of extensions: 18575304 Number of successful extensions: 74217 Number of sequences better than 1.0e-01: 13 Number of HSP's better than 0.1 without gapping: 22 Number of HSP's successfully gapped in prelim test: 11 Number of HSP's that attempted gapping in prelim test: 74163 Number of HSP's gapped (non-prelim): 34 length of query: 185 length of database: 1,040,396,356 effective HSP length: 121 effective length of query: 64 effective length of database: 668,023,212 effective search space: 42753485568 effective search space used: 42753485568 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.3 bits) S2: 89 (39.0 bits)