BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (857 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q7VQF3 Chaperone protein clpB n=10 Tax=Proteobacteria R... 1209 0.0 UniRef50_Q6NF05 Chaperone protein clpB n=18 Tax=cellular organis... 942 0.0 UniRef50_Q73IE4 Chaperone protein clpB n=14 Tax=Rickettsiales Re... 933 0.0 UniRef50_Q7UM33 Chaperone protein clpB n=21 Tax=Bacteria RepID=C... 932 0.0 UniRef50_Q9RVI3 Chaperone protein clpB n=9 Tax=Bacteria RepID=CL... 926 0.0 UniRef50_P74459 Chaperone protein clpB 1 n=479 Tax=cellular orga... 912 0.0 UniRef50_D2NR34 ATPase with chaperone activity, ATP-binding subu... 909 0.0 UniRef50_A1A3G2 Chaperone clpB n=4 Tax=Bacteria RepID=A1A3G2_BIFAA 904 0.0 UniRef50_C4FCQ4 Putative uncharacterized protein n=1 Tax=Bifidob... 894 0.0 UniRef50_D0D9L8 Chaperone protein ClpB n=1 Tax=Citreicella sp. S... 886 0.0 UniRef50_Q6GIB2 Chaperone protein clpB n=1154 Tax=cellular organ... 877 0.0 UniRef50_C3XMZ6 ATP-dependent protease ATP-binding subunit n=4 T... 866 0.0 UniRef50_Q10YU4 ATPase AAA-2 n=7 Tax=Bacteria RepID=Q10YU4_TRIEI 862 0.0 UniRef50_P42730 Heat shock protein 101 n=34 Tax=Eukaryota RepID=... 858 0.0 UniRef50_Q3L1D0 Heat shock protein 101 n=6 Tax=Eukaryota RepID=Q... 856 0.0 UniRef50_C0GVK9 ATPase AAA-2 domain protein n=1 Tax=Desulfonatro... 832 0.0 UniRef50_B5HY88 Chaperone protein clpB n=1 Tax=Streptomyces svic... 826 0.0 UniRef50_B5Y5I5 Predicted protein n=4 Tax=cellular organisms Rep... 823 0.0 UniRef50_C9RKR5 ATPase AAA-2 domain protein n=1 Tax=Fibrobacter ... 822 0.0 UniRef50_Q4FXS7 Serine peptidase, putative n=12 Tax=cellular org... 819 0.0 UniRef50_Q9ZMH1 Chaperone protein clpB n=85 Tax=Bacteria RepID=C... 817 0.0 UniRef50_D1B2U8 ATPase AAA-2 domain protein n=4 Tax=Bacteria Rep... 813 0.0 UniRef50_Q4FY62 Serine peptidase, putative n=12 Tax=cellular org... 804 0.0 UniRef50_C4R0B7 Oligomeric mitochondrial matrix chaperone n=48 T... 803 0.0 UniRef50_Q7AJA9 Chaperone protein clpB n=4 Tax=Chlamydiales RepI... 796 0.0 UniRef50_Q822Q4 Chaperone protein clpB n=11 Tax=cellular organis... 783 0.0 UniRef50_Q8IB03 ClpB protein, putative n=13 Tax=cellular organis... 776 0.0 UniRef50_D2VCN5 Heat shock protein 101 n=1 Tax=Naegleria gruberi... 767 0.0 UniRef50_P33416 Heat shock protein 78, mitochondrial n=49 Tax=Di... 763 0.0 UniRef50_C3XDZ0 ATP-dependent protease ATP-binding subunit n=2 T... 761 0.0 UniRef50_B7FUC8 Predicted protein n=1 Tax=Phaeodactylum tricornu... 751 0.0 UniRef50_P31540 Heat shock protein hsp98 n=59 Tax=Dikarya RepID=... 749 0.0 UniRef50_B0EI70 Heat shock protein, putative n=1 Tax=Entamoeba d... 748 0.0 UniRef50_A8B6K3 ClpB protein n=1 Tax=Giardia lamblia ATCC 50803 ... 746 0.0 UniRef50_Q83FI1 Chaperone protein clpB n=13 Tax=Bacteria RepID=C... 743 0.0 UniRef50_D1HM97 Whole genome shotgun sequence of line PN40024, s... 741 0.0 UniRef50_Q4UAC3 ClpB protein, putative n=8 Tax=cellular organism... 740 0.0 UniRef50_Q47KW3 ATPase n=56 Tax=root RepID=Q47KW3_THEFY 734 0.0 UniRef50_P35100 ATP-dependent Clp protease ATP-binding subunit c... 733 0.0 UniRef50_P31541 ATP-dependent Clp protease ATP-binding subunit c... 732 0.0 UniRef50_P37571 Negative regulator of genetic competence clpC/me... 729 0.0 UniRef50_C9KP02 Negative regulator of genetic competence ClpC/Me... 723 0.0 UniRef50_C8NK17 ATP-dependent Clp protease ATP-binding subunit n... 722 0.0 UniRef50_O78410 ATP-dependent Clp protease ATP-binding subunit c... 717 0.0 UniRef50_C6HIF6 Heat shock protein n=1 Tax=Ajellomyces capsulatu... 709 0.0 UniRef50_C7PZ63 ATPase AAA-2 domain protein n=7 Tax=Actinomyceta... 707 0.0 UniRef50_Q6KHS7 ATP-dependent Clp protease, ATPase subunit n=3 T... 706 0.0 UniRef50_Q7U3T3 Chaperone protein clpB 2 n=10 Tax=cellular organ... 704 0.0 UniRef50_P31539 Heat shock protein 104 n=15 Tax=Eukaryota RepID=... 704 0.0 UniRef50_C8NYT7 ATP-dependent Clp protease ATP-binding subunit n... 700 0.0 UniRef50_Q1WVA6 Negative regulator of genetic competence n=19 Ta... 696 0.0 UniRef50_A4FF35 Clp protease ATP binding subunit n=7 Tax=Bacteri... 693 0.0 UniRef50_Q4L3I4 ATP-dependent Clp protease ATP-binding subunit c... 690 0.0 UniRef50_Q46HG6 ATPase n=17 Tax=Cyanobacteria RepID=Q46HG6_PROMT 682 0.0 UniRef50_B5ZBN7 Chaperone protein ClpB n=44 Tax=cellular organis... 680 0.0 UniRef50_B5Y8V8 Negative regulator of genetic competence ClpC/me... 679 0.0 UniRef50_C1MLM7 Predicted protein n=1 Tax=Micromonas pusilla CCM... 676 0.0 UniRef50_A4RQJ1 Chaperone, Hsp100 family, ClpB-type n=2 Tax=Ostr... 676 0.0 UniRef50_C5NWX3 Negative regulator of genetic competence ClpC/Me... 674 0.0 UniRef50_Q8EW28 Chaperone protein clpB n=2 Tax=Bacteria RepID=CL... 673 0.0 UniRef50_Q7NAZ3 Chaperone protein clpB n=5 Tax=Mollicutes RepID=... 667 0.0 UniRef50_Q8DTC7 Chaperone protein clpB n=2 Tax=Streptococcus mut... 665 0.0 UniRef50_A6X7G2 ATPase AAA-2 domain protein n=64 Tax=cellular or... 665 0.0 UniRef50_C7RFB8 ATPase AAA-2 domain protein n=5 Tax=Clostridiale... 664 0.0 UniRef50_A1STR4 Chaperone endopeptidase Clp ATP-binding chain B,... 662 0.0 UniRef50_Q4AAM9 ATP-dependent protease binding protein n=7 Tax=M... 661 0.0 UniRef50_Q53N47 ATP-dependent Clp protease ATP-binding subunit c... 660 0.0 UniRef50_A8Q6N1 Putative uncharacterized protein n=1 Tax=Malasse... 659 0.0 UniRef50_Q046D3 ATP-binding subunit of Clp protease and DnaK/Dna... 658 0.0 UniRef50_Q2S2Z0 ATP-dependent Clp protease, ATPase subunit n=63 ... 654 0.0 UniRef50_A9FG71 ATPase with chaperone activity, two ATP-binding ... 652 0.0 UniRef50_C1GY73 Chaperone protein clpB n=1 Tax=Paracoccidioides ... 648 0.0 UniRef50_C2D9C6 ATPase with chaperone activity, ATP-binding subu... 642 0.0 UniRef50_Q54316 Hemolysin B n=25 Tax=cellular organisms RepID=HL... 642 0.0 UniRef50_Q9PKA8 Probable ATP-dependent Clp protease ATP-binding ... 639 0.0 UniRef50_B0SCX5 Endopeptidase Clp, ATP-dependent proteolytic sub... 638 0.0 UniRef50_A3DC71 ATPase AAA-2 n=13 Tax=Clostridiales RepID=A3DC71... 631 e-179 UniRef50_C9RMJ0 ATPase AAA-2 domain protein n=1 Tax=Fibrobacter ... 631 e-179 UniRef50_D1J7B8 ATP-dependent Clp protease ATP-binding subunit c... 629 e-178 UniRef50_C1EC57 ATP-dependent clp protease n=2 Tax=Micromonas Re... 626 e-177 UniRef50_A4E9C6 Putative uncharacterized protein n=3 Tax=Collins... 623 e-176 UniRef50_D1ZN19 Whole genome shotgun sequence assembly, scaffold... 622 e-176 UniRef50_B2RGN2 ATP-dependent Clp protease ATP-binding subunit C... 617 e-175 UniRef50_C7HWH6 Negative regulator of genetic competence MecB/cl... 616 e-174 UniRef50_C9SIE3 Heat shock protein n=1 Tax=Verticillium albo-atr... 607 e-172 UniRef50_Q8SQU0 HSP 101 RELATED PROTEIN n=2 Tax=Apansporoblastin... 606 e-171 UniRef50_D1PA52 Negative regulator of genetic competence n=1 Tax... 604 e-171 UniRef50_C7H8Y8 Clp protease, ATP-binding subunit ClpC n=3 Tax=C... 603 e-170 UniRef50_A6NVT1 Putative uncharacterized protein n=1 Tax=Bactero... 600 e-170 UniRef50_A0K1M3 ATPase AAA-2 domain protein n=6 Tax=Bacteria Rep... 599 e-169 UniRef50_C9LKK9 Negative regulator of genetic competence ClpC/Me... 597 e-169 UniRef50_C1SG60 ATPase with chaperone activity, ATP-binding subu... 595 e-168 UniRef50_C7RF24 ATPase AAA-2 domain protein n=1 Tax=Anaerococcus... 595 e-168 UniRef50_C4RIQ4 ATPase n=1 Tax=Micromonospora sp. ATCC 39149 Rep... 592 e-167 UniRef50_Q3LW37 ATP binding subunit of Clp protease n=1 Tax=Bige... 587 e-166 UniRef50_B2S3E1 ATP-dependent Clp protease, subunit C n=4 Tax=Tr... 580 e-164 UniRef50_C6HYE9 ATPase AAA-2 domain protein n=1 Tax=Leptospirill... 580 e-164 UniRef50_UPI0001C3229B ATPase AAA-2 domain protein n=1 Tax=Conex... 580 e-164 UniRef50_UPI0001C37703 ATPase AAA-2 domain protein n=1 Tax=Rumin... 574 e-162 UniRef50_B3L4X1 Heat shock protein 101, putative n=8 Tax=Plasmod... 573 e-162 UniRef50_Q030Z1 ATP-binding subunit of Clp protease and DnaK/Dna... 570 e-161 UniRef50_A8JF08 ClpB chaperone, Hsp100 family (Fragment) n=1 Tax... 567 e-160 UniRef50_Q9S5Z2 ATP-dependent Clp protease ATP-binding subunit c... 565 e-159 UniRef50_B8NZA1 Predicted protein (Fragment) n=1 Tax=Postia plac... 565 e-159 UniRef50_Q9KAV7 ATP-dependent proteinase n=3 Tax=Bacillus RepID=... 559 e-157 UniRef50_C2MCW4 ATP-dependent Clp protease, ATP-binding subunit ... 556 e-156 UniRef50_A5WFU1 ATP-dependent Clp protease ATP-binding subunit C... 554 e-156 UniRef50_C5WHX6 ATP-dependent endopeptidase clp ATP-binding subu... 550 e-154 UniRef50_A6FZR3 ATP-dependent chaperone protein ClpB n=3 Tax=Pro... 544 e-153 UniRef50_A6EIG8 Putative ATP-dependent protease n=1 Tax=Pedobact... 541 e-152 UniRef50_A7ZQR5 ClpA/ClpB family protein n=21 Tax=Proteobacteria... 538 e-151 UniRef50_B7VTU3 Chaperone ClpB n=1 Tax=Vibrio splendidus LGP32 R... 533 e-149 UniRef50_C9M6K4 Negative regulator of genetic competence ClpC/Me... 531 e-149 UniRef50_A7APH1 Clp amino terminal domain containing protein n=1... 530 e-148 UniRef50_A6V7C9 Type VI secretion ATPase, ClpV1 family n=10 Tax=... 530 e-148 UniRef50_C2BFB3 ATP-binding ClpB chaperone n=1 Tax=Anaerococcus ... 529 e-148 UniRef50_Q1N528 ATPase with chaperone activity, ATP-binding subu... 527 e-148 UniRef50_D1Y1U8 Chaperone protein ClpB 1 n=1 Tax=Pyramidobacter ... 526 e-147 UniRef50_A7JYI1 ATPases with chaperone activity, ATP-binding sub... 525 e-147 UniRef50_A6FFT5 Putative ATPase with chaperone activity n=1 Tax=... 525 e-147 UniRef50_Q2SEG4 ATPase with chaperone activity, ATP-binding subu... 520 e-145 UniRef50_Q21KI1 ATPase AAA-2 n=7 Tax=Gammaproteobacteria RepID=Q... 518 e-145 UniRef50_B8EIH7 Type VI secretion ATPase, ClpV1 family n=56 Tax=... 518 e-145 UniRef50_Q9I742 Protein clpV1 n=17 Tax=Proteobacteria RepID=CLPV... 518 e-145 UniRef50_D2QJP1 ATPase AAA-2 domain protein n=12 Tax=Bacteria Re... 517 e-145 UniRef50_D2QZM9 Type VI secretion ATPase, ClpV1 family n=6 Tax=B... 511 e-143 UniRef50_A8YTL4 ATP-dependent protease n=26 Tax=Lactobacillus Re... 510 e-143 UniRef50_B6EJJ8 Chaperone ClpB-1 n=12 Tax=Proteobacteria RepID=B... 509 e-142 UniRef50_C9XYK6 Chaperone protein clpB n=1 Tax=Cronobacter turic... 509 e-142 UniRef50_B7H4I2 Type VI secretion ATPase, ClpV1 family n=26 Tax=... 508 e-142 UniRef50_B5FD85 Type VI secretion ATPase, ClpV1 family n=2 Tax=V... 507 e-142 UniRef50_A9FKV2 Endopeptidase Clp n=6 Tax=Proteobacteria RepID=A... 504 e-141 UniRef50_C5ZYU5 ATP-dependent Clp protease subunit n=2 Tax=Prote... 503 e-140 UniRef50_D1TDQ5 Type VI secretion ATPase n=1 Tax=Burkholderia sp... 500 e-139 UniRef50_A9BLL0 Type VI secretion ATPase, ClpV1 family n=46 Tax=... 498 e-139 UniRef50_Q6GDQ0 ATP-dependent Clp protease ATP-binding subunit c... 496 e-138 UniRef50_D2TPV1 T6SS protein Cts2V n=1 Tax=Citrobacter rodentium... 494 e-138 UniRef50_B7LFQ0 Putative uncharacterized protein n=1 Tax=Escheri... 489 e-136 UniRef50_B9K2G7 ATP-dependent Clp protease ATP-binding subunit n... 487 e-136 UniRef50_B6R3N5 Type VI secretion ATPase, ClpV1 family n=4 Tax=P... 487 e-136 UniRef50_B8L5D3 Type VI secretion ATPase, ClpV1 family n=1 Tax=S... 487 e-136 UniRef50_Q7CUP5 ATP-dependent Clp protease, ATP-binding subunit ... 486 e-135 UniRef50_B6EJ73 Chaperone ClpB n=1 Tax=Aliivibrio salmonicida LF... 484 e-135 UniRef50_Q9F746 Chaperone protein clpB n=100 Tax=Proteobacteria ... 479 e-133 UniRef50_A6VUK5 ATPase AAA-2 domain protein n=64 Tax=Gammaproteo... 479 e-133 UniRef50_B3XE87 Type VI secretion ATPase, ClpV1 family n=1 Tax=E... 479 e-133 UniRef50_Q88IA4 Chaperone-associated ATPase, putative n=14 Tax=G... 476 e-132 UniRef50_C5ALE8 ATPases with chaperone activity, ATP-binding sub... 475 e-132 UniRef50_B5FRR8 Chaperone protein clpB n=19 Tax=Gammaproteobacte... 474 e-132 UniRef50_Q7N4N8 Similar to ClpA/B-type chaperone n=3 Tax=Enterob... 472 e-131 UniRef50_C4GNT2 ClpB protein n=23 Tax=Yersinia RepID=C4GNT2_YERPN 466 e-129 UniRef50_Q6TKU1 Aec27 n=39 Tax=cellular organisms RepID=Q6TKU1_E... 464 e-129 UniRef50_Q3JGS2 ATP-dependent Clp protease ATP-binding subunit n... 461 e-128 UniRef50_Q8KA87 Probable chaperone protein clpB 2 n=15 Tax=cellu... 461 e-128 UniRef50_UPI000194EB59 PREDICTED: hypothetical protein, partial ... 460 e-127 UniRef50_C7PG59 ATPase AAA-2 domain protein n=1 Tax=Chitinophaga... 447 e-124 UniRef50_UPI000185C840 putative chaperone protein n=1 Tax=Capnoc... 446 e-123 UniRef50_B3EPU4 ATPase AAA-2 domain protein n=4 Tax=Chlorobiacea... 438 e-121 UniRef50_B3QUJ2 ATPase AAA-2 domain protein n=1 Tax=Chloroherpet... 437 e-120 UniRef50_C5NWU6 Negative regulator of genetic competence ClpC/Me... 428 e-118 UniRef50_A5FES3 ATPase AAA-2 domain protein n=1 Tax=Flavobacteri... 410 e-112 UniRef50_A9BF41 ATPase AAA-2 domain protein n=14 Tax=cellular or... 401 e-110 UniRef50_Q8IM28 ATP-dependent CLP protease, putative n=6 Tax=cel... 394 e-108 UniRef50_C4W7H5 ATPase AAA-2 domain protein n=1 Tax=Staphylococc... 393 e-107 UniRef50_B3LAU4 ATP-dependent Clp protease, putative n=1 Tax=Pla... 392 e-107 UniRef50_D1QW31 Chaperone protein ClpB n=1 Tax=Prevotella oris F... 384 e-104 UniRef50_C9MS36 ClpB protein n=1 Tax=Prevotella veroralis F0319 ... 380 e-103 UniRef50_Q64SE5 ATP-dependent Clp protease ATP-binding subunit n... 378 e-103 UniRef50_A5IMI3 ATPase AAA-2 domain protein n=8 Tax=Thermotogace... 376 e-102 UniRef50_A5K1F9 ATP-dependent Clp protease, putative n=1 Tax=Pla... 375 e-102 UniRef50_B0JIB9 ATP-dependent Clp protease ATPase subunit n=11 T... 375 e-102 UniRef50_C4YJT6 Heat shock protein 78, mitochondrial n=1 Tax=Can... 375 e-102 UniRef50_Q93ZM4 AT3g48870/T21J18_140 n=31 Tax=cellular organisms... 369 e-100 UniRef50_A4W448 ATPases with chaperone activity, ATP-binding sub... 366 2e-99 UniRef50_C1ASB5 Putative ATP-dependent Clp protease ATP-binding ... 365 3e-99 UniRef50_A3CMZ1 ATPases with chaperone activity, ATP-binding sub... 362 3e-98 UniRef50_A7HJU2 ATPase AAA-2 domain protein n=4 Tax=Thermotogace... 361 6e-98 UniRef50_A8MFR5 ATPase AAA-2 domain protein n=3 Tax=Clostridiale... 360 2e-97 UniRef50_A4FG52 Clp protease ATP binding subunit n=1 Tax=Sacchar... 357 1e-96 UniRef50_Q025Q2 ATPase AAA-2 domain protein n=12 Tax=Bacteria Re... 356 2e-96 UniRef50_C4V0P0 ATPase with chaperone activity, ATP-binding subu... 354 8e-96 UniRef50_D1Y107 Negative regulator of genetic competence ClpC/Me... 349 2e-94 UniRef50_A4S065 Chaperone, Hsp100 family, ClpC-type n=4 Tax=Mami... 349 3e-94 UniRef50_P42762 ERD1 protein, chloroplastic n=22 Tax=cellular or... 348 4e-94 UniRef50_UPI000198575F PREDICTED: hypothetical protein n=1 Tax=V... 347 1e-93 UniRef50_Q6ETV8 Putative uncharacterized protein n=4 Tax=Poaceae... 344 9e-93 UniRef50_Q0E0M6 Os02g0537400 protein n=2 Tax=Poaceae RepID=Q0E0M... 343 1e-92 UniRef50_C3KS27 Chaperone ClpB n=2 Tax=Clostridium botulinum Rep... 342 5e-92 UniRef50_B9H7W9 Predicted protein n=3 Tax=rosids RepID=B9H7W9_POPTR 336 3e-90 UniRef50_C5TJM2 Chaperone protein ClpB n=1 Tax=Neisseria flavesc... 332 4e-89 UniRef50_UPI000187E1EB hypothetical protein MPER_11665 n=1 Tax=M... 324 1e-86 UniRef50_A8I1M5 ClpD chaperone, Hsp100 family n=1 Tax=Chlamydomo... 321 9e-86 UniRef50_B0MVC3 Putative uncharacterized protein n=3 Tax=Bactero... 319 3e-85 UniRef50_B0MPJ8 Putative uncharacterized protein n=1 Tax=Eubacte... 318 8e-85 UniRef50_B6KUA3 ClpB protein, putative n=3 Tax=Toxoplasma gondii... 317 2e-84 UniRef50_B3ERL7 Putative uncharacterized protein n=1 Tax=Candida... 312 4e-83 UniRef50_A6Q1Y5 ATP-dependent Clp protease, ATP-binding subunit ... 311 9e-83 UniRef50_B7GCV2 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 310 2e-82 UniRef50_Q1IZ22 ATPase AAA-2 n=8 Tax=Deinococci RepID=Q1IZ22_DEIGD 310 2e-82 UniRef50_A9FU98 Endopeptidase ATPase with chaperone activity,two... 308 7e-82 UniRef50_A8SAZ3 Putative uncharacterized protein n=1 Tax=Faecali... 306 2e-81 UniRef50_Q4U8P5 Endopeptidase (CLP homologue) ATP-binding chain,... 305 4e-81 UniRef50_D2KTB1 BC18 (Fragment) n=1 Tax=Babesia caballi RepID=D2... 305 5e-81 UniRef50_B8BXC6 Member of the clp superfamily, regulatory gamma ... 305 6e-81 UniRef50_A6QBZ7 ATP-dependent Clp protease, ATP-binding subunit ... 304 1e-80 UniRef50_B6KIW5 Heat shock protein, putative n=3 Tax=Toxoplasma ... 302 3e-80 UniRef50_A3DES0 ATP-dependent Clp protease ATP-binding subunit C... 301 7e-80 UniRef50_Q2T6Y8 ATP-dependent Clp protease, ATP-binding subunit ... 301 9e-80 UniRef50_A9AYE5 ATPase AAA-2 domain protein n=1 Tax=Herpetosipho... 301 1e-79 UniRef50_C7H753 ATP-dependent Clp protease, ATP-binding subunit ... 300 2e-79 UniRef50_B8BRH2 Member of the clp superfamily, regulatory gamma ... 300 2e-79 UniRef50_A3A5U3 Putative uncharacterized protein n=2 Tax=Oryza s... 298 4e-79 UniRef50_Q3JL54 ATP-dependent Clp protease, ATP-binding subunit ... 298 4e-79 UniRef50_A3K6L5 ATP-dependent Clp protease, ATP-binding subunit ... 298 5e-79 UniRef50_B0H033 Chaperone ClpB 1 (Fragment) n=3 Tax=Gammaproteob... 296 3e-78 UniRef50_Q7XL03 OJ000315_02.14 protein n=2 Tax=Oryza sativa Japo... 295 7e-78 UniRef50_P05444 ClpA homolog protein n=766 Tax=cellular organism... 293 2e-77 UniRef50_A8EW19 ATP-dependent Clp protease, ATP-binding subunit ... 292 4e-77 UniRef50_B8J0Q4 ATP-dependent Clp protease, ATP-binding subunit ... 289 4e-76 UniRef50_A7HAC7 ATPase AAA-2 domain protein n=6 Tax=Cystobacteri... 289 4e-76 UniRef50_A8I996 ClpB chaperone, Hsp100 family (Fragment) n=1 Tax... 288 5e-76 UniRef50_D2VM27 Predicted protein n=1 Tax=Naegleria gruberi RepI... 286 3e-75 UniRef50_C6V4H7 ATP-dependent Clp protease, ATP-binding subunit ... 283 2e-74 UniRef50_Q2GGQ4 ATP-dependent Clp protease, ATP-binding subunit ... 281 1e-73 UniRef50_C3XML9 Endopeptidase subunit Clp ATP-binding A n=1 Tax=... 281 1e-73 UniRef50_C5YMW4 Putative uncharacterized protein Sb07g002440 n=1... 280 1e-73 UniRef50_C5LIJ2 ATP-dependent Clp protease, putative n=3 Tax=Per... 279 3e-73 UniRef50_Q98IM7 Probable ClpA/B-type protease n=6 Tax=Rhizobiale... 277 1e-72 UniRef50_UPI0001C372BC ATPase n=1 Tax=Ruminococcus flavefaciens ... 276 3e-72 UniRef50_C5ZY74 ATP-dependent Clp protease, ATP-binding subunit ... 276 3e-72 UniRef50_A5MZQ1 ClpA n=7 Tax=Clostridium RepID=A5MZQ1_CLOK5 276 4e-72 UniRef50_C4I651 Type VI secretion ATPase, ClpV1 family n=52 Tax=... 275 4e-72 UniRef50_Q73KU3 ATP-dependent Clp protease, ATP-binding subunit ... 273 2e-71 UniRef50_A7AW26 Chaperone clpB, putative n=1 Tax=Babesia bovis R... 272 3e-71 UniRef50_C5IFU1 Heat shock protein n=1 Tax=Eimeria tenella RepID... 270 2e-70 UniRef50_C2EIG8 ATP-dependent Clp protease n=4 Tax=Lactobacillal... 270 2e-70 UniRef50_A6G683 Probable ATP-dependent Clp protease n=1 Tax=Ples... 270 2e-70 UniRef50_B2S440 ATP-dependent Clp protease, subunit A n=2 Tax=Tr... 267 1e-69 UniRef50_Q7YN63 Clp protease ATP-binding subunit n=5 Tax=Apicomp... 266 2e-69 UniRef50_D1AUG7 ATP-dependent clp protease ATP-binding subunit n... 266 2e-69 UniRef50_C8PIY8 ATP-dependent CLP protease ATP-binding subunit n... 264 1e-68 UniRef50_UPI0001973947 ATP-dependent Clp protease, ATP-binding s... 264 1e-68 UniRef50_A6KY28 ATP-dependent Clp protease, ATP-binding subunit ... 262 5e-68 UniRef50_UPI00016B2080 clp protease ATP binding subunit n=4 Tax=... 259 2e-67 UniRef50_A6G5U6 AAA ATPase n=1 Tax=Plesiocystis pacifica SIR-1 R... 259 3e-67 UniRef50_Q9MTD7 Clp n=136 Tax=Apicomplexa RepID=Q9MTD7_TOXGO 259 3e-67 UniRef50_A7H2P9 ATP-dependent Clp protease, ATP-binding subunit ... 257 1e-66 UniRef50_C3XFH5 ATP-dependent Clp protease ClpB n=1 Tax=Helicoba... 256 2e-66 UniRef50_B5RQH1 ATP-dependent Clp protease, subunit C n=24 Tax=B... 256 4e-66 UniRef50_Q25823 Clp (C?) protein n=14 Tax=Haemosporida RepID=Q25... 255 5e-66 >UniRef50_Q7VQF3 Chaperone protein clpB n=10 Tax=Proteobacteria RepID=CLPB_BLOFL Length = 872 Score = 1209 bits (3129), Expect = 0.0, Method: Compositional matrix adjust. Identities = 585/861 (67%), Positives = 704/861 (81%), Gaps = 5/861 (0%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEG-GSVSPLLTSAGINAGQ 59 MRLDR FQLAL+DAQS+A+G DNQFIEP+H+M L ++ S+ LL AG N Q Sbjct: 1 MRLDRFDRSFQLALSDAQSIAIGKDNQFIEPVHVMYTFLKEKKYKSIRNLLIHAGSNVDQ 60 Query: 60 LRTDINQALNRLPQVEGTGGD--VQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALE 117 L + Q N LP+VE GD VQ S LV++LNLCDKLAQK N I SE+F++AAL+ Sbjct: 61 LYKSVEQVCNDLPRVESVDGDREVQCSHALVKILNLCDKLAQKYHSNIIFSEVFIIAALQ 120 Query: 118 SRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKL 177 S+ L+ +LK +G + + ++ + S++D +++ Q L+++T+D+T AEQ L Sbjct: 121 SQDVLSILLKKSGIVKELLEKLVQYEQSNYSIHDDSFKNRTQILEQFTVDITSLAEQNNL 180 Query: 178 DPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRV 237 DPVIGRDEEIRRTIQVLQRRTKNNPVLIG PGVGKTAIVEGLAQRIIN EVPEGLK R+ Sbjct: 181 DPVIGRDEEIRRTIQVLQRRTKNNPVLIGNPGVGKTAIVEGLAQRIINKEVPEGLKNSRI 240 Query: 238 LALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGN 297 L+LD+ AL+AG KYRGEFEER K VL ++K + N ILFIDELH MVGAGK DG+MDA N Sbjct: 241 LSLDIAALLAGTKYRGEFEERFKKVLYAVSK-DNNTILFIDELHVMVGAGKTDGSMDASN 299 Query: 298 MLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERY 357 M+KP LARGELHCVGATTLDEY +YIEKDAALERRFQK+F+ EP++E+TIAILRGLKERY Sbjct: 300 MIKPKLARGELHCVGATTLDEYSRYIEKDAALERRFQKIFIIEPNIENTIAILRGLKERY 359 Query: 358 ELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDR 417 ELHH+V ITDPAIVAAATLS+RYI+DRQLPDKAIDLIDEAASSIR+QIDSKPE+LDRLDR Sbjct: 360 ELHHNVHITDPAIVAAATLSNRYISDRQLPDKAIDLIDEAASSIRIQIDSKPEDLDRLDR 419 Query: 418 RIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKA 477 RIIQLKLE QAL KESDE SKKRL++L+ ELS KE++YS LE EWK E++SL Q IK+ Sbjct: 420 RIIQLKLECQALKKESDELSKKRLEILSMELSQKEQEYSVLESEWKRERSSLFDIQNIKS 479 Query: 478 ELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIA 537 +LE+AK ++Q+RR+GDLA+MSELQYG+IPELEK+L A Q K MRLLRN V++ EIA Sbjct: 480 DLEKAKTILDQSRRIGDLAQMSELQYGRIPELEKKLFNAIQSSNKKMRLLRNYVSEVEIA 539 Query: 538 EVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRP 597 EVL++WTGIP+SR++ +E+ KLL ME LH VIGQ+EAV +SNAIRRSR+GL+DP RP Sbjct: 540 EVLSKWTGIPISRILANEKNKLLNMETILHQLVIGQDEAVRVISNAIRRSRSGLSDPKRP 599 Query: 598 IGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYE 657 IGSF+FLGPTGVGKTELCKAL+ F+FD+D AMVRIDMSEFMEKHSVS+L+GAPPGY+GYE Sbjct: 600 IGSFMFLGPTGVGKTELCKALSQFLFDTDNAMVRIDMSEFMEKHSVSKLLGAPPGYIGYE 659 Query: 658 EGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMT 717 G YLTE++RRRPYS++LLDE+EKAH DVFNILLQVLDDGRLTD QGR VDF NTV+IMT Sbjct: 660 SGAYLTESIRRRPYSIVLLDEIEKAHLDVFNILLQVLDDGRLTDNQGRMVDFNNTVIIMT 719 Query: 718 SNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQI 777 SNLGSDLIQ++F DY MK+ VL VV+ FRPEFINRIDE+VVFHPL +H+ IA I Sbjct: 720 SNLGSDLIQKKFDISDYDTMKKTVLNVVNQYFRPEFINRIDEIVVFHPLSIKHLIDIANI 779 Query: 778 QLKRLYKRLEERGY-EIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSG 836 QLK LY RLEERGY I+++AL LS+ G+DP+YGARPLKR IQQ IENPL+Q+ILS Sbjct: 780 QLKYLYSRLEERGYPRTGITNKALLFLSKIGFDPIYGARPLKRIIQQYIENPLSQKILSD 839 Query: 837 ELVPGKVIRLEVNEDRIVAVQ 857 +L+PG+ I ++V D IV +Q Sbjct: 840 DLLPGRSITIDVQNDNIVFIQ 860 >UniRef50_Q6NF05 Chaperone protein clpB n=18 Tax=cellular organisms RepID=CLPB_CORDI Length = 849 Score = 942 bits (2435), Expect = 0.0, Method: Compositional matrix adjust. Identities = 480/847 (56%), Positives = 621/847 (73%), Gaps = 15/847 (1%) Query: 7 TNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQ 66 T K Q AL +A A N I P HL++A+L QE G P+L + G++ +R + Sbjct: 7 TTKTQEALQEALQKASAAGNPDIRPEHLLAAILGQEDGIAIPVLRATGVDPDVVRREAEA 66 Query: 67 ALNRLPQVEGTG-GDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADI 125 + +LP+ EG + ++D + VLN +LA + GD ++S+E+ + A A++ Sbjct: 67 LVAKLPKAEGANLANPNFNRDALSVLNNAQELAGELGDEYVSTEVLLAAVARGTNDAAEL 126 Query: 126 LKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDE 185 L GAT I +RG + V + EDQ QAL+KY+ DLT RA +GK+DPVIGRD+ Sbjct: 127 LTKRGATYDVIKGVFPSVRGNKKVTTESPEDQFQALEKYSTDLTARAREGKIDPVIGRDQ 186 Query: 186 EIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGAL 245 EIRR +QVL RRTKNNPVLIGEPGVGKTAIVEGLA+RI+ G+VPE LKG+ +++LD+G++ Sbjct: 187 EIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVAGDVPESLKGKTLISLDLGSM 246 Query: 246 VAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAG-KADGAMDAGNMLKPALA 304 VAGAKYRGEFEERLK VL+++ EG +I FIDELHT+VGAG D AMDAGNM+KP LA Sbjct: 247 VAGAKYRGEFEERLKAVLDEIKSAEGEIITFIDELHTIVGAGATGDSAMDAGNMIKPLLA 306 Query: 305 RGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQ 364 RGEL VGATTLDEYR+YIEKDAALERRFQ+VFV EPSVED + ILRGLKERYE+HH V+ Sbjct: 307 RGELRLVGATTLDEYRKYIEKDAALERRFQQVFVGEPSVEDAVGILRGLKERYEVHHGVR 366 Query: 365 ITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKL 424 I D A+VAAATLS RYI R LPDKAIDL+DEAAS +RM+IDS P+E+D L+R + +L++ Sbjct: 367 IQDSALVAAATLSDRYITSRFLPDKAIDLVDEAASRLRMEIDSSPQEIDELERIVRRLEI 426 Query: 425 EQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKI 484 E+ AL KE+D ASK RL L +EL+D+ + EL W EK +++ + K ELE+ + Sbjct: 427 EEVALSKETDAASKDRLIKLRQELADEREKLGELVARWNNEKGAINKVREAKEELERLRS 486 Query: 485 AIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWT 544 E A R GD +++EL+YG+IPELEKQ+ A + +T +L +VT IAEV++ WT Sbjct: 487 ESEIAERDGDYGKVAELRYGRIPELEKQVAEAEEHTVETT-MLSEEVTPDTIAEVVSAWT 545 Query: 545 GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFL 604 GIP +M++ E EKLL ME EL RV+GQ+EAV AVS+A+RR+RAG+ADPNRP GSFLFL Sbjct: 546 GIPAGKMLQGETEKLLNMEAELGKRVVGQSEAVVAVSDAVRRARAGVADPNRPTGSFLFL 605 Query: 605 GPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTE 664 GPTGVGKTEL KALA FMFD D AMVRIDMSE+ EKH+V+RLVGAPPGYVGY++GG LTE Sbjct: 606 GPTGVGKTELAKALAEFMFDDDRAMVRIDMSEYGEKHAVARLVGAPPGYVGYDQGGQLTE 665 Query: 665 AVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDL 724 AVRRRPY+V+L DEVEKAHPDVF+ILLQVLD+GRLTDGQGRTVDFRNTV+I+TSNLG+ Sbjct: 666 AVRRRPYTVVLFDEVEKAHPDVFDILLQVLDEGRLTDGQGRTVDFRNTVLILTSNLGA-- 723 Query: 725 IQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYK 784 K+ ++ V F+PEF+NR+D+VV+F PL ++ + I +IQ+ +L + Sbjct: 724 ----------GGTKDEMMDAVKRAFKPEFVNRLDDVVIFDPLSQEQLTHIVEIQIAQLAQ 773 Query: 785 RLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVI 844 RL R + +SD A L+E GY+P YGARPL+R IQQ I + LA+++LSGE+ G + Sbjct: 774 RLAARRLTLAVSDSAKLWLAERGYEPAYGARPLRRLIQQAIGDQLAKKLLSGEVRDGSEV 833 Query: 845 RLEVNED 851 ++ + D Sbjct: 834 HVDADLD 840 >UniRef50_Q73IE4 Chaperone protein clpB n=14 Tax=Rickettsiales RepID=CLPB_WOLPM Length = 853 Score = 933 bits (2412), Expect = 0.0, Method: Compositional matrix adjust. Identities = 460/841 (54%), Positives = 617/841 (73%), Gaps = 9/841 (1%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M L++ T K + + AQ ALG +Q P HL+ +L E G V L+ + G N + Sbjct: 1 MDLNKFTEKAKSLIQSAQMKALGAGHQIFMPEHLLKVMLEDESGLVQDLINACGGNVQSI 60 Query: 61 RTDINQALNRLPQVEGTG-GDVQPSQDLVRVLNLCDKLAQKRGDNFISSE-LFVLAALES 118 ++ A+ +LP +EG G G +Q S+++ +V +A++ D+F++ E L + Sbjct: 61 SDAVDSAIKKLPVIEGPGSGGLQLSREIAKVFEDSIGIAKRNKDSFVAVERLLQGLTAQK 120 Query: 119 RGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLD 178 T+ IL G T + + +MR G S + +E++ A KKYT D+TE A QGKLD Sbjct: 121 DDTVGKILAENGVTPQKLNSVVAEMRKGSSADSPNSEEKLNAAKKYTKDVTELAMQGKLD 180 Query: 179 PVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVL 238 PVIGRDEEIRRT+QV RRTKNNPVLIGEPGVGKTAIVEGLA RI+ +VP GL +VL Sbjct: 181 PVIGRDEEIRRTMQVSLRRTKNNPVLIGEPGVGKTAIVEGLANRIVANDVPLGLHDAKVL 240 Query: 239 ALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNM 298 ALD+GAL+AG K+RGEFEERLK V+N+L++ EG VILFIDELHT+VGAG GAMDA N+ Sbjct: 241 ALDLGALIAGTKFRGEFEERLKAVINELSRAEGKVILFIDELHTLVGAGATSGAMDASNL 300 Query: 299 LKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYE 358 LKPALARGE+ C+GATTLDEYRQ+IEKD AL RRFQ VF+++P+ DTI+ILRGLKERYE Sbjct: 301 LKPALARGEVRCIGATTLDEYRQHIEKDPALARRFQPVFISQPTETDTISILRGLKERYE 360 Query: 359 LHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418 +HH ++ITD AI+AAATLS+RYI DR LPDKAIDLIDEAAS +R+++DSKPE +D L+R+ Sbjct: 361 VHHGIRITDGAIIAAATLSNRYITDRFLPDKAIDLIDEAASRVRIEMDSKPEVIDELERK 420 Query: 419 IIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAE 478 +IQLK+E +AL KESDE SK+RL +NEE+ + ++++L +W+ EK ++ Q + Sbjct: 421 VIQLKIEAEALKKESDENSKQRLKKINEEIENLNSKFADLNSKWQMEKNKIARIQETAEK 480 Query: 479 LEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAE 538 L+ A+ +E +R G+L R EL YG IP+LE +L+ ++ T L+ +VT +IA Sbjct: 481 LDNARKELELVQRSGNLGRAGELMYGVIPQLENELKNQEKV---TDSFLKKEVTGDDIAN 537 Query: 539 VLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPI 598 ++++WTGIPV MM SE+EKLL ME E+ RVIGQ +A++A+SNA+RRSR+G+ D N+P Sbjct: 538 IVSKWTGIPVDNMMHSEKEKLLNMENEIGRRVIGQKDAIEAISNAVRRSRSGVQDTNKPF 597 Query: 599 GSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEE 658 GSFLFLGPTGVGKTEL KALA F+FD A++R DMSE+MEKHSVS+L+GAPPGYVGYE+ Sbjct: 598 GSFLFLGPTGVGKTELAKALAEFLFDDQSALLRFDMSEYMEKHSVSKLIGAPPGYVGYEQ 657 Query: 659 GGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTS 718 GG LTEAVRRRPY VIL DE+EKA+PD+FN+LLQ+LD+GRLTD G+ +DFRNT++I+TS Sbjct: 658 GGRLTEAVRRRPYQVILFDEIEKANPDIFNLLLQILDEGRLTDSHGKLIDFRNTILILTS 717 Query: 719 NLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQ 778 NLG++++ + G +D ++ V+ +V FRPEF+NR+DE+++FH L I I +Q Sbjct: 718 NLGAEIMLK--GNVD--SVRNEVMQIVKSAFRPEFLNRLDEIIIFHSLTRDDIYKIIDVQ 773 Query: 779 LKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGEL 838 L K L +R I + EA +L+++ GYDP YGARPLKR IQ+ I+N LA+ +LSGE+ Sbjct: 774 FSYLQKTLAKRKLSISLLQEAKELIAQTGYDPEYGARPLKRVIQECIQNNLAKLVLSGEV 833 Query: 839 V 839 V Sbjct: 834 V 834 >UniRef50_Q7UM33 Chaperone protein clpB n=21 Tax=Bacteria RepID=CLPB_RHOBA Length = 881 Score = 932 bits (2409), Expect = 0.0, Method: Compositional matrix adjust. Identities = 481/880 (54%), Positives = 620/880 (70%), Gaps = 30/880 (3%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 R+D+LT + Q +A+AQ+ A N I+PLH++SA +NQ G +PLL ++ +L Sbjct: 3 FRIDKLTTQAQNVVAEAQAQATSAGNAEIDPLHVLSAAVNQRDGITTPLLEKINVDVPKL 62 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG 120 ++ + L +LP G G + S L L A+ D ++S+E ++ + Sbjct: 63 KSLLTSELEKLPHASGMG-QARVSAKLQAALEASATSAESLKDEYVSTEHLLVGLARTDN 121 Query: 121 TLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPV 180 ++L G + ++ A+ Q+RG V D AE QAL+K+ IDLT+ A+ GKLDPV Sbjct: 122 KAKNLLSLLGVSDNDLLTAMSQIRGSARVTDPNAESTYQALEKFGIDLTQLAQSGKLDPV 181 Query: 181 IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL 240 IGRD EIRR IQVL RRTKNNPVLIG+PGVGKTAI EGLA RI G+VP+ LKG++V++L Sbjct: 182 IGRDNEIRRVIQVLSRRTKNNPVLIGQPGVGKTAIAEGLALRIFEGDVPQSLKGKKVVSL 241 Query: 241 DMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLK 300 DMGALVAGAK+RG+FEERLK VL ++ +G VILFIDELH +VGAG A+G+ DA N+LK Sbjct: 242 DMGALVAGAKFRGDFEERLKSVLREVKDSDGKVILFIDELHLVVGAGNAEGSADAANLLK 301 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELH 360 P LARG L C+GATTLDEYRQ+IEKDAALERRFQ VFV EP+VEDT+AILRGLK RYE H Sbjct: 302 PELARGALRCIGATTLDEYRQHIEKDAALERRFQPVFVGEPNVEDTVAILRGLKPRYESH 361 Query: 361 HHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRII 420 H V+ITD A+VAAA LS RYIADR LPDKAIDLIDEAAS + M+ +S PE +DRL RR+ Sbjct: 362 HGVRITDSALVAAANLSDRYIADRFLPDKAIDLIDEAASRLAMEKESVPEPIDRLQRRLR 421 Query: 421 QLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELE 480 QL+L + L+ E + ++ + + EE+ + + + L+E+W+ EK L Q+++ E++ Sbjct: 422 QLELVHRQLVDEQEASAVDKRVEVEEEMESAKAELASLKEQWETEKMGLDDVQSVRQEVD 481 Query: 481 QAKIAIEQ-------------------ARRVGDLARMSELQYGKIPELEKQLEAATQLE- 520 Q + Q + + +R+ ELQ +I E EK ++A Q + Sbjct: 482 QLQHRFAQLDADAKEKQLRGESPEDAYSEMLQVQSRLRELQ-ARIDEAEKHDDSADQTKE 540 Query: 521 ---GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAV 577 + RLLR +VT+ EIAEV++ WTG+PV+RMME+ER KLL ME+ LH RV+GQ+EAV Sbjct: 541 EPGDEKRRLLRKEVTEEEIAEVVSTWTGVPVTRMMETERAKLLVMEERLHQRVVGQDEAV 600 Query: 578 DAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEF 637 AVS+A+RRSR+GL DPNRPIGSFLFLGPTGVGKTELCKALA MFD + AMVRIDMSEF Sbjct: 601 TAVSDAVRRSRSGLQDPNRPIGSFLFLGPTGVGKTELCKALAEVMFDDESAMVRIDMSEF 660 Query: 638 MEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDG 697 ME+HSVSRL+GAPPGYVGYEEGG LTEAVRRRPY+VILLDE+EKAHPDVFN+LLQVLDDG Sbjct: 661 MERHSVSRLIGAPPGYVGYEEGGKLTEAVRRRPYAVILLDEMEKAHPDVFNVLLQVLDDG 720 Query: 698 RLTDGQGRTVDFRNTVVIMTSNLGSDLIQ---ERFGELDYAHMKELVLGVVSHNFRPEFI 754 RLTDGQGRTV+F NTVV+MTSN+GS +IQ E G D M++ V + F PEF+ Sbjct: 721 RLTDGQGRTVNFTNTVVVMTSNVGSQVIQRVTEEGGGED--EMRQAVEDALKARFLPEFL 778 Query: 755 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 814 NRID+ V+FHPL + I I Q+QL+ L RL G I+D A+ ++E GYDP YGA Sbjct: 779 NRIDDTVIFHPLQQTQIRRIVQLQLEELRSRLAANGLSFEITDAAIDQIAEVGYDPAYGA 838 Query: 815 RPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIV 854 RPLKR IQ++++NPLA IL G I+++ + D+ V Sbjct: 839 RPLKRVIQREVQNPLASAILKNSYAEGTTIKIDHDGDQFV 878 >UniRef50_Q9RVI3 Chaperone protein clpB n=9 Tax=Bacteria RepID=CLPB_DEIRA Length = 852 Score = 926 bits (2394), Expect = 0.0, Method: Compositional matrix adjust. Identities = 469/854 (54%), Positives = 637/854 (74%), Gaps = 17/854 (1%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M +R T +A+ AQ LA + NQ + H++ LL+ + + S LT AG + Sbjct: 1 MNPERFTEASAVAINAAQQLAQENHNQNLTHFHVLRTLLDND--TASRALTLAGGDLNTA 58 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL-ESR 119 R ++ + +LP+V+G+ G + L R D LA + GD+F++++ +LA E R Sbjct: 59 RAALDAEIAKLPKVQGSDGQLYLDPALNRAFQKADTLAAQLGDSFVAADTLLLALRGEYR 118 Query: 120 GT-LADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLD 178 G L D ++ +A+ + R G++V ++ +E Q AL KY DLT+RA GK D Sbjct: 119 GRGLPD--------EVSLNRAVTEQRKGKTVTNKTSEQQFDALNKYGTDLTQRARDGKFD 170 Query: 179 PVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVL 238 PVIGRDEEIRR +Q+L RR+KNNPVLIGEPGVGKTAI EGLA RI+ G+VPEGL+ ++++ Sbjct: 171 PVIGRDEEIRRVMQILLRRSKNNPVLIGEPGVGKTAIAEGLAMRIVKGDVPEGLRDKKIV 230 Query: 239 ALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNM 298 +L+MG+L+AGAK+RGEFEERLKGV++++ K G +ILF+DE+HT+VGAGK +G+ DAGNM Sbjct: 231 SLEMGSLLAGAKFRGEFEERLKGVIDEVVKSAGEIILFVDEIHTIVGAGKTEGSPDAGNM 290 Query: 299 LKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYE 358 LKPALARGELH +GATTLDEYR+ IEKDAALERRFQ VFV EPSVEDTI+ILRG+KERY+ Sbjct: 291 LKPALARGELHLIGATTLDEYRE-IEKDAALERRFQPVFVDEPSVEDTISILRGIKERYQ 349 Query: 359 LHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418 +HH+V+ITDPA+VAAATLS+RYI DRQLPDKAIDLIDE+A+ +RM ++S PE +D+L RR Sbjct: 350 VHHNVEITDPALVAAATLSNRYITDRQLPDKAIDLIDESAARLRMALESSPERIDQLSRR 409 Query: 419 IIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAE 478 +QL++E++AL +E D S+ RL + +L + +E+ W+AE+ ++ + + + Sbjct: 410 KLQLEIEREALKREKDVDSQNRLLDIENQLKTLTDELNEVRSRWEAERGEVAALREKREK 469 Query: 479 LEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAE 538 L+ + IE+ARR DL + L+YG++P LEK ++ + + K+ +VT+ +IA Sbjct: 470 LDAVRTQIEKARRDYDLEEAARLEYGELPALEKDVQDLEK-KLKSAEFAHMEVTEEDIAA 528 Query: 539 VLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPI 598 V++RWTGIPVS++ME EREKLL +E++LH RVIGQ+ A+ +VS+AIRR+RAGL DPNRP+ Sbjct: 529 VVSRWTGIPVSKLMEGEREKLLHLEEQLHGRVIGQDRAIVSVSDAIRRARAGLNDPNRPL 588 Query: 599 GSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEE 658 GSF+FLGP+GVGKTEL KALA F+FDS +AMVRIDMSE+MEKH+V+RL+GAPPGYVG+EE Sbjct: 589 GSFMFLGPSGVGKTELAKALAEFLFDSSDAMVRIDMSEYMEKHTVARLIGAPPGYVGFEE 648 Query: 659 GGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTS 718 GG LTEAVRRRPY+VIL DE+EKAHPDVFN+LLQVLDDGRLTDGQGRTVDFRNT++IMTS Sbjct: 649 GGQLTEAVRRRPYAVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTS 708 Query: 719 NLGSDLIQE--RFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQ 776 N+GS LI E + GE D +K V+ + FRPEF+NR+D+++VF L + + SI Sbjct: 709 NIGSPLILEMQQRGE-DAETIKSAVMDELRGEFRPEFLNRVDDIIVFDALTAKDLQSIVD 767 Query: 777 IQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSG 836 IQL L +RL ER +H++++A L+E GYDP YGARPL+R I Q IE PLA++IL G Sbjct: 768 IQLGGLRRRLAERRITLHLTEDAKDKLAELGYDPAYGARPLRRTISQYIETPLAREILGG 827 Query: 837 ELVPGKVIRLEVNE 850 ++ G V+ ++ + Sbjct: 828 QIQDGSVLNVDYGD 841 >UniRef50_P74459 Chaperone protein clpB 1 n=479 Tax=cellular organisms RepID=CLPB1_SYNY3 Length = 898 Score = 912 bits (2358), Expect = 0.0, Method: Compositional matrix adjust. Identities = 462/864 (53%), Positives = 632/864 (73%), Gaps = 15/864 (1%) Query: 5 RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDI 64 + T + A+ +Q +A + N +E H++ ALL Q+ G + + A ++ LR + Sbjct: 8 KFTEQAWDAIVKSQEVARRYKNTNLEVEHILLALLEQDMGLAARIFQRAAVDGEGLRQQL 67 Query: 65 NQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLAD 124 NR P+ + + + L +L+ D D FIS E ++ E Sbjct: 68 EIFTNRQPK-QAYVEQLYLGRSLDVMLDRADAARSSWEDKFISVEHLLVGFAEDDRVGRK 126 Query: 125 ILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRD 184 L+A ++ AI+ +RG + V + E++ +AL KY DLTE+A QGKLDPVIGRD Sbjct: 127 TLRAFNLDPQDLELAIKAIRGSQKVTEPNQEEKYEALDKYGRDLTEQARQGKLDPVIGRD 186 Query: 185 EEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGA 244 EEIRR IQVL RR+KNNPVLIGEPGVGKTAI EGLAQRIING+VPE LK R++++LDMG+ Sbjct: 187 EEIRRVIQVLSRRSKNNPVLIGEPGVGKTAIAEGLAQRIINGDVPESLKNRQLISLDMGS 246 Query: 245 LVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAG--KADGAMDAGNMLKPA 302 L+AGAKYRGEFEERL+ V+ ++ +G +ILFIDE+HT+VGAG + G+MDAGN+LKP Sbjct: 247 LIAGAKYRGEFEERLRSVMKEVTNSDGQIILFIDEVHTVVGAGGREGSGSMDAGNLLKPM 306 Query: 303 LARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHH 362 LARGEL C+GATTLDEYR+ IEKD ALERRFQ+V+V +PSV+DTI+ILRGLKE+YE+HH Sbjct: 307 LARGELRCIGATTLDEYRKNIEKDPALERRFQQVYVKQPSVDDTISILRGLKEKYEVHHG 366 Query: 363 VQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQL 422 V+ITD A+VAAATLSHRYI DR LPDKAIDL+DEAA+ ++M+I SKP EL+ +DRR++QL Sbjct: 367 VKITDSALVAAATLSHRYIQDRFLPDKAIDLVDEAAARLKMEITSKPVELEDIDRRLMQL 426 Query: 423 KLEQQALMKE-------SDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTI 475 ++E+ +L E +D++SK+RL+ + +E+++ E Q EL +W +EK L T+ Sbjct: 427 QMEKLSLEGEEKRPGLGADKSSKERLEKIQQEITELEGQQQELSGQWLSEKQMLEEINTL 486 Query: 476 KAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAAT----QLEGKTMRLLRNKV 531 K + ++ ++ +E+A R D + ++++YG++ L+ +E +++G LLR +V Sbjct: 487 KEKEQELRLQVEKAERATDWEKAAKIKYGELEVLQHDIEEKESKLLEIQGSGNTLLREQV 546 Query: 532 TDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGL 591 T+++IAE++A WTGIP++R+ME+ER+KLL++E LH RVIGQ EAV AVS AIRR+RAG+ Sbjct: 547 TESDIAEIVAGWTGIPMNRLMETERQKLLQLEGHLHQRVIGQKEAVAAVSAAIRRARAGM 606 Query: 592 ADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPP 651 DP+RPIGSFLF+GPTGVGKTEL +ALA F+FDS+EAMVRIDMSE+MEKH+VSRL+GAPP Sbjct: 607 KDPSRPIGSFLFMGPTGVGKTELARALAGFLFDSEEAMVRIDMSEYMEKHAVSRLIGAPP 666 Query: 652 GYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRN 711 GYVGYEEGG L+EAVRRRPYSV+LLDEVEKAH DVFNILLQVLDDGR+TD QGR VDFRN Sbjct: 667 GYVGYEEGGQLSEAVRRRPYSVVLLDEVEKAHLDVFNILLQVLDDGRITDSQGRVVDFRN 726 Query: 712 TVVIMTSNLGSD-LIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQH 770 T+++MTSN+GSD ++ + DY M++ VL + +FRPEF+NRID++++FH L Sbjct: 727 TIIVMTSNIGSDHILSLSADDADYDKMQKQVLQSLRKHFRPEFLNRIDDLIIFHTLKRDE 786 Query: 771 IASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLA 830 + I +Q+KR+ K L+E+ + +SD AL + GYDP YGARPLKRAIQ+Q+ENP+A Sbjct: 787 LRRIVVLQIKRIEKLLDEQKITLSLSDAALDHIVSAGYDPTYGARPLKRAIQRQLENPIA 846 Query: 831 QQILSGELVPGKVIRLEVNEDRIV 854 +IL V G I ++ + +++ Sbjct: 847 TKILENTFVAGDKILIDCVDGQLI 870 >UniRef50_D2NR34 ATPase with chaperone activity, ATP-binding subunit n=3 Tax=Actinobacteria (class) RepID=D2NR34_9MICC Length = 959 Score = 909 bits (2349), Expect = 0.0, Method: Compositional matrix adjust. Identities = 466/851 (54%), Positives = 618/851 (72%), Gaps = 5/851 (0%) Query: 4 DRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTD 63 ++ T K Q ++ A + A N IE H++ AL++Q G +L +AG++ + Sbjct: 93 NKFTTKSQEVISAANTNAQTAGNPTIETAHILKALMDQREGVAVAVLKAAGLDVDAISEA 152 Query: 64 INQALNRLPQVEGTG-GDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTL 122 + + +LP+ G + S+ + L AQ GD ++S+E+ +L + Sbjct: 153 ASAEIKKLPKASGASVQNASLSRAALSALQAAQTRAQGFGDTYVSTEMILLGIASGTDST 212 Query: 123 ADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIG 182 A + GAT I Q I +RG +V+ E QAL+KY DLT A GKLDPVIG Sbjct: 213 ATAMHKLGATAELIAQTIPNVRGDRTVDTPDPEGTFQALEKYGTDLTAIARAGKLDPVIG 272 Query: 183 RDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDM 242 RD EIRR +QVL RRTKNNPVLIGEPGVGKTA+VEGLAQR+++G+VPE L+G+ +++LD+ Sbjct: 273 RDSEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRMVSGDVPESLRGKTLISLDL 332 Query: 243 GALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPA 302 G++VAGAKYRGEFEERLK VL ++ K EG ++ FIDE+HT+VGAG ++G+MDAGNMLKP Sbjct: 333 GSMVAGAKYRGEFEERLKAVLEEIKKSEGQIVTFIDEIHTVVGAGASEGSMDAGNMLKPM 392 Query: 303 LARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHH 362 LARGEL +GATTLDEYR+ IEKD ALERRFQ+V+V EPSV+DTI ILRGLKERYE HH Sbjct: 393 LARGELRLIGATTLDEYRENIEKDPALERRFQQVYVGEPSVDDTIGILRGLKERYEAHHK 452 Query: 363 VQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQL 422 VQI D A+VAAATLS+RYI RQLPDKAIDLIDEAAS +RM+IDS PEE+D+L R + +L Sbjct: 453 VQIADSALVAAATLSNRYIPSRQLPDKAIDLIDEAASRLRMEIDSAPEEIDQLRRAVDRL 512 Query: 423 KLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQA 482 +E+ AL E+D AS +RL+ L ++++DK+ Q L W+AEKASL+ IK ++++ Sbjct: 513 TMEELALADETDPASVERLEALRKDMADKKEQLDALNARWEAEKASLNRVGDIKTQIDEL 572 Query: 483 KIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE--GKTMRLLRNKVTDAEIAEVL 540 + E A+R G+LA S L YG+IP + +LE A + E K ++ +VT +IAEV+ Sbjct: 573 RSRAEVAQREGNLAEASRLLYGEIPAKQAELEEAQRAEDTAKNESMVSEEVTADDIAEVI 632 Query: 541 ARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGS 600 + WTGIP RMM+ E EKLL ME+ + R+IGQ AV AVS+A+RR+RAG++DPNRPIGS Sbjct: 633 SSWTGIPAGRMMQGESEKLLEMEKRIGARLIGQEAAVVAVSDAVRRARAGISDPNRPIGS 692 Query: 601 FLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG 660 FLFLGPTGVGKTEL KALA F FD + A+VRIDMSE+ EKH+VSRLVGAPPGYVG+EEGG Sbjct: 693 FLFLGPTGVGKTELAKALAEFQFDDERALVRIDMSEYSEKHTVSRLVGAPPGYVGHEEGG 752 Query: 661 YLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL 720 LTEAVRRRPYSV+LLDEVEKAHP+VF+ILLQVLDDGRLTDGQGRTVDFRN ++I+TSNL Sbjct: 753 QLTEAVRRRPYSVVLLDEVEKAHPEVFDILLQVLDDGRLTDGQGRTVDFRNVILILTSNL 812 Query: 721 GSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLK 780 GS + + +L + E L VV FRPEF+NR+D++++F PL +++ I +Q+K Sbjct: 813 GSQYLVNQ--DLPFEERSEKALEVVHQAFRPEFLNRLDDIIMFQPLSAENLGQIVGLQIK 870 Query: 781 RLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVP 840 + KRLE+R +++++ AL+ L + GYDP +GARPL+R +Q++I + LA+ ILSG + Sbjct: 871 SMAKRLEDRRLTLNVTEAALEWLGKTGYDPAFGARPLRRLVQREIGDRLARGILSGAIHD 930 Query: 841 GKVIRLEVNED 851 G + ++VN D Sbjct: 931 GDTVTVDVNPD 941 >UniRef50_A1A3G2 Chaperone clpB n=4 Tax=Bacteria RepID=A1A3G2_BIFAA Length = 905 Score = 904 bits (2335), Expect = 0.0, Method: Compositional matrix adjust. Identities = 457/866 (52%), Positives = 622/866 (71%), Gaps = 29/866 (3%) Query: 5 RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDI 64 + T Q AL+DA A N ++ LHL+ A+L QE L+ +AG NA + ++ Sbjct: 4 KFTQMAQEALSDAVQNAAALGNPQVDTLHLLDAMLRQENSMARALIEAAGGNAQNVSAEV 63 Query: 65 NQALNRLPQVEGTGGDVQP--SQDLVRVLNLCDKLAQKRGDNFISSELFVLA-ALESRGT 121 +QA+ LP G+ QP S+ L VL+ +K Q+RGD +++ +L ++A A Sbjct: 64 HQAMQSLPSASGST-TTQPDVSRQLSAVLSQAEKEMQRRGDEYVTVDLMLVAIAAAKPNQ 122 Query: 122 LADILKAAGATTANITQAIEQMRGGE-SVNDQGAEDQRQALKKYTIDLTERAEQGKLDPV 180 ADIL+ G T + A+ RG + V AE +AL+KY+ DLT A++GKLDPV Sbjct: 123 SADILEKNGLTADKLRNALTAARGSDRKVTSADAEGSYKALEKYSTDLTAAAKEGKLDPV 182 Query: 181 IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL 240 IGRD+EIRR IQ+L RRTKNNPVLIGEPGVGKTA+VEGLAQRI+ G+VP L+ +++++L Sbjct: 183 IGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQNKKLISL 242 Query: 241 DMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLK 300 D+G++VAG+KYRGEFEERLK VL ++ K +G +I FIDE+HT+VGAG A+G+MDAGNMLK Sbjct: 243 DLGSMVAGSKYRGEFEERLKSVLEEIKKADGQIITFIDEIHTIVGAGAAEGSMDAGNMLK 302 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELH 360 P LARGEL +GATTLDEYR+ IEKD ALERRFQ+VFV EPSVEDT+AILRG+ +YE H Sbjct: 303 PMLARGELRLIGATTLDEYRENIEKDPALERRFQQVFVGEPSVEDTVAILRGIAPKYEAH 362 Query: 361 HHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRII 420 H V I D A+VAAATLS+RYI+ RQLPDKAIDL+DEAA+ +RM++DS PEE+D L R++ Sbjct: 363 HKVTIGDDALVAAATLSNRYISGRQLPDKAIDLVDEAAAHLRMELDSSPEEIDELRRQVD 422 Query: 421 QLKLEQQALM-------------KESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKA 467 +LK+E+ L+ E D+++K RL LN+E++DK + + L+ W AEK Sbjct: 423 RLKMEKSYLLGNPKNDKATEKAEAELDDSAKDRLADLNQEIADKSEKLNGLKARWDAEKN 482 Query: 468 SLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKT---- 523 + ++ +L++ + E+ R GDLA+ S + YG+IP ++K++ A + E ++ Sbjct: 483 GHNRIGDLRKKLDELRTQAEKYEREGDLAKSSAINYGEIPAIQKEIAQAEKNEAESGGAD 542 Query: 524 -----MRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVD 578 + ++ ++V IAE+++ WTGIPV R+M+ E EKLL ME+ L RVIGQ EA+ Sbjct: 543 NANADVPMVPDRVDADSIAEIVSDWTGIPVGRLMQGENEKLLHMEEYLGKRVIGQKEAIQ 602 Query: 579 AVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFM 638 AVS+A+RRSRAG++DPNRP GSFLFLGPTGVGKTEL KALA+F+FD ++AMVRIDMSE+M Sbjct: 603 AVSDAVRRSRAGISDPNRPTGSFLFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYM 662 Query: 639 EKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGR 698 EK SVSRL+GA PGY+GYEEGG LTEAVRRRPYSV+L DEVEKA+P+VF++LLQVLDDGR Sbjct: 663 EKASVSRLIGAAPGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKANPEVFDVLLQVLDDGR 722 Query: 699 LTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRID 758 LTDGQGRTVDF+NT++IMTSNLGS + ++D K+ V+ V F+PEFINR+D Sbjct: 723 LTDGQGRTVDFKNTILIMTSNLGSQFLVNP--DMDADAKKKAVMDAVHMQFKPEFINRLD 780 Query: 759 EVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLK 818 E+V+FHPL + + I IQ+ ++ RL +R + ++D A + L+ GYDP YGARPL+ Sbjct: 781 ELVMFHPLTREELGGIVDIQVAQVSARLTDRRITLDVTDSAREWLANTGYDPAYGARPLR 840 Query: 819 RAIQQQIENPLAQQILSGELVPGKVI 844 R +Q ++ + LA+ +L+GE+ G + Sbjct: 841 RLVQTEVGDQLARMLLAGEVHDGDTV 866 >UniRef50_C4FCQ4 Putative uncharacterized protein n=1 Tax=Bifidobacterium angulatum DSM 20098 RepID=C4FCQ4_9BIFI Length = 910 Score = 894 bits (2309), Expect = 0.0, Method: Compositional matrix adjust. Identities = 457/872 (52%), Positives = 619/872 (70%), Gaps = 30/872 (3%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M ++LTN + A+ DA A N I+ LHL++ALL QE G V L+ +AG +A + Sbjct: 1 MDQNKLTNMSREAITDAVQSASAAGNAQIDVLHLLNALLTQEQGVVRGLIEAAGGDAKAI 60 Query: 61 RTDINQALNRLPQVEG-TGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSE-LFVLAALES 118 T + AL LP G T QPS+ L +K Q+ GD +IS+E L + A + Sbjct: 61 GTAVRNALTNLPSASGSTTAQPQPSRQFEAALVQSEKEMQQMGDEYISTEHLLIGIAAAA 120 Query: 119 RGTLADILKAAGATTANITQAIEQMRGGE-SVNDQGAEDQRQALKKYTIDLTERAEQGKL 177 ADIL+A T + A+ +RGG+ V AE +AL+KY+ DLT A++GKL Sbjct: 121 PNQAADILQANNVTAQALRAAVPTVRGGDRKVTSPDAEGSYKALEKYSTDLTAAAKEGKL 180 Query: 178 DPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRV 237 DPVIGRD+EIRR IQ+L RRTKNNPVLIGEPGVGKTA+VEGLAQRI+ G+VP L+ +++ Sbjct: 181 DPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQNKKL 240 Query: 238 LALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGN 297 ++LD+G++VAG+KYRGEFEERLK VL ++ G +I FIDE+HT+VGAG A+G+MDAGN Sbjct: 241 ISLDLGSMVAGSKYRGEFEERLKSVLEEIKNANGQIITFIDEIHTIVGAGAAEGSMDAGN 300 Query: 298 MLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERY 357 MLKP LARGEL +GATTLDEYR+ IEKD ALERRFQ+VFV EPSVEDTIAILRG+ +Y Sbjct: 301 MLKPMLARGELRLIGATTLDEYRENIEKDPALERRFQQVFVGEPSVEDTIAILRGIAPKY 360 Query: 358 ELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDR 417 E HH V I D A+VAAATLS+RYI+ RQLPDKAIDL+DEAA+ +RM++DS PEE+D L R Sbjct: 361 EAHHKVTIGDDALVAAATLSNRYISGRQLPDKAIDLVDEAAAHLRMELDSSPEEIDELTR 420 Query: 418 RIIQLKLEQQALM-------------KESDEASKKRLDMLNEELSDKERQYSELEEEWKA 464 ++ +LK+E+ L+ E D+++K RL LN+E+++K + + L+ W A Sbjct: 421 QVERLKMEKSYLLGNPKNDKAADKAEAELDDSAKDRLADLNKEIANKSEKLNGLKARWDA 480 Query: 465 EKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE---- 520 EK+ + ++ +L++ + E+ R GDLA+ S + YG+IP ++K++ A + E Sbjct: 481 EKSGHNRIGDLRKKLDELRTQAERYEREGDLAKSSAINYGEIPNIQKEIAQAEKNEQNVK 540 Query: 521 --------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIG 572 + ++ ++V +AE+++ WTGIPV R+M+ E EKLL ME L RVIG Sbjct: 541 NGSNAANTAADVPMVPDRVDADSVAEIVSDWTGIPVGRLMQGENEKLLTMEDYLGKRVIG 600 Query: 573 QNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRI 632 Q EA+ AVS+A+RRSRAG++DPNRP GSFLFLGPTGVGKTEL KALA+F+FD ++AMVRI Sbjct: 601 QKEAIKAVSDAVRRSRAGISDPNRPTGSFLFLGPTGVGKTELAKALADFLFDDEKAMVRI 660 Query: 633 DMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQ 692 DMSE+MEK SVSRL+GA PGYVGYE+GG LTEAVRRRPYSV+L DEVEKA+P++F++LLQ Sbjct: 661 DMSEYMEKASVSRLIGAAPGYVGYEQGGQLTEAVRRRPYSVVLFDEVEKANPEIFDVLLQ 720 Query: 693 VLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPE 752 VLDDGRLTDGQGRTVDF+NT++IMTSNLGS + ++D ++ V+ V NF+PE Sbjct: 721 VLDDGRLTDGQGRTVDFKNTILIMTSNLGSQFLVNE--DMDDEAKRKAVMDTVHMNFKPE 778 Query: 753 FINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVY 812 F+NR+D+ V+FHPL + + I IQ+ + RL +R + ++D A + L+ GYDP Y Sbjct: 779 FLNRLDDTVMFHPLTREELGGIVDIQVANVSARLTDRRITLDVTDSAREWLANVGYDPAY 838 Query: 813 GARPLKRAIQQQIENPLAQQILSGELVPGKVI 844 GARPL+R +Q ++ + LA+ +L+G++ G + Sbjct: 839 GARPLRRLVQTEVGDQLARMLLAGKVHDGDTV 870 >UniRef50_D0D9L8 Chaperone protein ClpB n=1 Tax=Citreicella sp. SE45 RepID=D0D9L8_9RHOB Length = 864 Score = 886 bits (2290), Expect = 0.0, Method: Compositional matrix adjust. Identities = 437/722 (60%), Positives = 559/722 (77%), Gaps = 4/722 (0%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M L++ T + + + AQ++A+ ++Q + P HL+ AL++ E G S L+T AG ++ Sbjct: 1 MNLEKFTERSRGFIQAAQTIAMRDNHQRLVPEHLLKALMDDEQGLASNLITRAGGQPPRV 60 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLA-ALESR 119 + Q L+++P+V G G V RVL+ +K+A+K GD+F+ E + A A+E Sbjct: 61 VEVLEQKLSKIPRVSGDAGQVYLDPATARVLDEAEKIAKKAGDSFVPVERILTALAIEKS 120 Query: 120 GTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDP 179 G + L+A T + +AI +R G + + AE+ ALKKY DLTE AEQG++DP Sbjct: 121 GA-KEALEAGNLTPQRLNEAINDLRKGRTADSASAEEGYDALKKYARDLTEAAEQGRIDP 179 Query: 180 VIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLA 239 +IGRDEEIRR++QVL RRTKNNPVLIGEPGVGKTAI EGLA RII+G+VPE L+ +R++A Sbjct: 180 IIGRDEEIRRSMQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIIDGDVPESLRNKRLMA 239 Query: 240 LDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNML 299 LDMGAL+AGAKYRGEFEERLK +L ++ G +ILFIDE+HT+VGAGK DGAMDA N+L Sbjct: 240 LDMGALIAGAKYRGEFEERLKSILKEIESAAGEIILFIDEMHTLVGAGKTDGAMDASNLL 299 Query: 300 KPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYEL 359 KPALARGELHCVGATTLDEYR+++EKD AL RRFQ V V EP+VEDTI+ILRG+KE+YEL Sbjct: 300 KPALARGELHCVGATTLDEYRKHVEKDPALARRFQPVMVQEPTVEDTISILRGIKEKYEL 359 Query: 360 HHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRI 419 HH V+I+D A+VAAATLSHRYI DR LPDKAIDL+DEAAS +RM++DSKPEELD+LDR I Sbjct: 360 HHGVRISDSALVAAATLSHRYITDRFLPDKAIDLMDEAASRLRMEVDSKPEELDQLDRNI 419 Query: 420 IQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAEL 479 +Q+++E +AL E D ASK RL+ L +EL+D E + +E+ +W+AE+ L+ + +K +L Sbjct: 420 LQMQIEVEALKLEDDAASKDRLEKLEKELADLEEKSAEMTAQWQAERDKLASARDLKEQL 479 Query: 480 EQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEV 539 ++ + +E A+R G+ A+ ELQYGKIPE+EK+L A EG M + V +IAEV Sbjct: 480 DRLRAELEIAKREGNFAKAGELQYGKIPEIEKKLAEAEAAEGDVM--VEEAVRPEQIAEV 537 Query: 540 LARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIG 599 + RWTGIP S+M+E EREKLLRME LH RV+GQN+AV AV+NA+RR+RAGL D NRP+G Sbjct: 538 VERWTGIPTSKMLEGEREKLLRMEDGLHKRVVGQNQAVKAVANAVRRARAGLNDENRPLG 597 Query: 600 SFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEG 659 SFLFLGPTGVGKTEL KA+A F+FD D AMVRIDMSEFMEKHSV+RL+GAPPGYVGY+EG Sbjct: 598 SFLFLGPTGVGKTELTKAVAEFLFDDDSAMVRIDMSEFMEKHSVARLIGAPPGYVGYDEG 657 Query: 660 GYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSN 719 G LTEAVRRRPY V+L DEVEKAHPDVFN+LLQVLDDG LTDGQGRTVDF+ T++++TS Sbjct: 658 GVLTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGVLTDGQGRTVDFKQTLIVLTST 717 Query: 720 LG 721 L Sbjct: 718 LA 719 >UniRef50_Q6GIB2 Chaperone protein clpB n=1154 Tax=cellular organisms RepID=CLPB_STAAR Length = 869 Score = 877 bits (2266), Expect = 0.0, Method: Compositional matrix adjust. Identities = 453/863 (52%), Positives = 616/863 (71%), Gaps = 18/863 (2%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M ++++T Q AL A L+ H Q IE ++SA LN+ +L A I QL Sbjct: 1 MDINKMTYAVQSALQQAVELSQQHKLQNIEIEAILSAALNESESLYKSILERANIEVDQL 60 Query: 61 RTDINQALNRLPQVEGTGGDVQP----SQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL 116 LN VEG ++Q SQ +++ + ++ D +IS E + +A+ Sbjct: 61 NKAYEDKLNTYASVEG--DNIQYGQYISQQANQLITKAESYMKEYEDEYISMEHILRSAM 118 Query: 117 ESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGK 176 + T + I + I+++RGG V Q E +AL KY DL E QGK Sbjct: 119 DIDQTTKHYI---NNKVEVIKEIIKKVRGGNHVTSQNPEVNYEALAKYGRDLVEEVRQGK 175 Query: 177 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRR 236 +DPVIGRDEEIR TI++L R+TKNNPVLIGEPGVGKTAIVEGLAQRI+ +VPE L + Sbjct: 176 MDPVIGRDEEIRNTIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPESLLDKT 235 Query: 237 VLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAG 296 V LD+ ALVAGAKYRGEFEERLK VL ++ + +G +ILFIDE+H +VGAGK DGAMDAG Sbjct: 236 VFELDLSALVAGAKYRGEFEERLKAVLKEVKESDGRIILFIDEIHMLVGAGKTDGAMDAG 295 Query: 297 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 356 NMLKP LARGELHC+GATTL+EYR+YIEKD+ALERRFQKV V+EP VEDTI+ILRGLKER Sbjct: 296 NMLKPMLARGELHCIGATTLNEYREYIEKDSALERRFQKVAVSEPDVEDTISILRGLKER 355 Query: 357 YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 416 YE++H V+I D A+VAAA LS RYI DR LPDKAIDL+D+A ++IR ++ S P ELD+++ Sbjct: 356 YEVYHGVRIQDRALVAAAELSDRYITDRFLPDKAIDLVDQACATIRTEMGSNPTELDQVN 415 Query: 417 RRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476 RR++QL++E+ AL ESD ASK+RL L EEL++++ + + L+ ++EK ++ Q + Sbjct: 416 RRVMQLEIEESALKNESDNASKQRLQELQEELANEKEKQAALQSRVESEKEKIANLQEKR 475 Query: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEK---QLEAATQLEG--KTMRLLRNKV 531 A+L++++ A+E A+ +L + +ELQYG IP+LEK +LE Q E + R++R V Sbjct: 476 AQLDESRQALEDAQTNNNLEKAAELQYGTIPQLEKELRELEDNFQDEQGEDSDRMIREVV 535 Query: 532 TDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGL 591 TD EI +++++WTGIPVS+++E+EREKLL + LH RV+GQ++AVD VS+A+ R+RAG+ Sbjct: 536 TDEEIGDIVSQWTGIPVSKLVETEREKLLHLSDILHKRVVGQDKAVDLVSDAVVRARAGI 595 Query: 592 ADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPP 651 DPNRPIGSFLFLGPTGVGKTEL K+LA +FDS++ M+RIDMSE+MEKH+VSRL+GAPP Sbjct: 596 KDPNRPIGSFLFLGPTGVGKTELAKSLAASLFDSEKHMIRIDMSEYMEKHAVSRLIGAPP 655 Query: 652 GYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRN 711 GY+G++EGG LTEAVRR PYSVILLDEVEKAH DVFN+LLQ+LD+GRLTD +GR+VDF+N Sbjct: 656 GYIGHDEGGQLTEAVRRNPYSVILLDEVEKAHTDVFNVLLQILDEGRLTDSKGRSVDFKN 715 Query: 712 TVVIMTSNLGSDLIQERF---GELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGE 768 T++IMTSN+GS ++ E GE+ + K ++ + ++ F+PE +NR+D++V+F PL Sbjct: 716 TIIIMTSNIGSQVLLENVKETGEITESTEKAVMTSLNAY-FKPEILNRMDDIVLFKPLSI 774 Query: 769 QHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENP 828 ++ I L +L RL E+ I +SD+A L + Y+P YGARPLKR +Q+QIE P Sbjct: 775 DDMSMIVDKILTQLNIRLLEQRISIEVSDDAKAWLGQEAYEPQYGARPLKRFVQRQIETP 834 Query: 829 LAQQILSGELVPGKVIRLEVNED 851 LA+ ++ G I++ +N D Sbjct: 835 LARMMIKEGFPEGTTIKVNLNSD 857 >UniRef50_C3XMZ6 ATP-dependent protease ATP-binding subunit n=4 Tax=Helicobacter RepID=C3XMZ6_9HELI Length = 857 Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust. Identities = 433/847 (51%), Positives = 606/847 (71%), Gaps = 18/847 (2%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 L++LTN Q L SLAL + NQ IEP+HL A+L ++ L I+ L Sbjct: 4 LEKLTNTLQETLEQGASLALHNKNQEIEPIHLFWAMLTNTSSLLNQALNRLNIDKTALEL 63 Query: 63 DINQALNRLPQVEG-TGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES--- 118 + + LPQ T +++ S++L LN D LA K GD++I+ + F+LA L+ Sbjct: 64 EAKSIASALPQSSSVTKENLKISRNLSDALNQADGLATKNGDSYIALDTFILANLQEPTI 123 Query: 119 RGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLD 178 R + L + + E MR G ++ Q A++ ++L+K+ IDLT++A +GKLD Sbjct: 124 RNLFSKFL-----DINELKKTFEAMRAGAKIDSQSADENLESLEKFGIDLTKKAIEGKLD 178 Query: 179 PVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVL 238 PVIGRDEEI +Q+L R+TKNNP+L+GEPGVGKTA+VEGLAQRI+ EVP L+ +RV+ Sbjct: 179 PVIGRDEEITHMMQILIRKTKNNPILLGEPGVGKTAVVEGLAQRIVKKEVPLSLQNKRVI 238 Query: 239 ALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNM 298 ALDM ALVAGAKYRGEFE+RLK V++++ K+ GNVILFIDE+HT+VGAG ++G MDA N+ Sbjct: 239 ALDMSALVAGAKYRGEFEDRLKKVIDEV-KKSGNVILFIDEIHTIVGAGASEGGMDAANI 297 Query: 299 LKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYE 358 LKPALARGELH +GATTL EYR+Y EKDAAL+RRFQ V + EP+V + + ILRG+KER E Sbjct: 298 LKPALARGELHTIGATTLKEYRKYFEKDAALQRRFQPVMLNEPNVNEALQILRGIKERLE 357 Query: 359 LHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418 HH+V ITD A+VAAA LS RYI DR LPDKAIDLIDEAA+ ++MQI+S+P EL ++ R Sbjct: 358 AHHNVTITDSALVAAAKLSSRYITDRFLPDKAIDLIDEAAAELKMQIESEPSELAKVKRE 417 Query: 419 IIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAE 478 + L++E++AL+ E E ++ R+ + +ELSDKE LE +++ EK + IK E Sbjct: 418 MEALQVEKEALLMEKSEKNQARIAEIQKELSDKEEVKKALEAQFETEKQVFNKIANIKIE 477 Query: 479 LEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMR----LLRNKVTDA 534 ++ + A+R GD ++ +E+ YGKIP+LE +L+ Q + + M+ LLRN V Sbjct: 478 IDSLRTQSTLAKRNGDFSKAAEIDYGKIPQLENELKEQNQ-KWENMQENGTLLRNAVLPE 536 Query: 535 EIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADP 594 IA V++RWT IP+ +M++ E++K+L +E+EL V+GQ+ A+ A++ AI+R++AGL++ Sbjct: 537 SIAAVISRWTQIPIKKMLQDEKDKILGIEEELKKDVVGQDNALHAIARAIKRNKAGLSEL 596 Query: 595 NRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYV 654 NRPIGSFLFLGPTGVGKTE K LA F+FDS++ ++RIDMSE+MEKH+ SRLVGAPPGYV Sbjct: 597 NRPIGSFLFLGPTGVGKTESAKTLARFLFDSEKNLIRIDMSEYMEKHAASRLVGAPPGYV 656 Query: 655 GYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVV 714 GYEEGG LTEAVRR+PYSV+L DE+EKAHPDVFN+LLQVLDDGRLTD +G T+DFRNT++ Sbjct: 657 GYEEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNMLLQVLDDGRLTDNKGVTIDFRNTII 716 Query: 715 IMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASI 774 I+TSN+ S+ I E D ++ V + F+PEF+NR+D++++F+PLG + I SI Sbjct: 717 ILTSNIASNAIMEIS---DLTEREKAVKEALKGYFKPEFLNRLDDIIIFNPLGLEQITSI 773 Query: 775 AQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQIL 834 +I K + K+++ER + + + A + +++ G+DP+YGARPLKRA+ ++IE+ LA IL Sbjct: 774 VEILFKTIQKKVQERDINVTLEESAKEFIAKVGFDPIYGARPLKRALYEEIEDRLADLIL 833 Query: 835 SGELVPG 841 ++ G Sbjct: 834 QDKIKEG 840 >UniRef50_Q10YU4 ATPase AAA-2 n=7 Tax=Bacteria RepID=Q10YU4_TRIEI Length = 905 Score = 862 bits (2227), Expect = 0.0, Method: Compositional matrix adjust. Identities = 462/879 (52%), Positives = 627/879 (71%), Gaps = 42/879 (4%) Query: 5 RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDI 64 + T + A+ +Q +A + NQ +E HL+ ALL Q+G + + +L+ +GI +L + Sbjct: 8 KFTEQAWDAIVKSQDVAKRYQNQQLEVEHLIIALLEQQG-TANKILSRSGIEPEKLLQQV 66 Query: 65 NQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLAD 124 + + R P+V G+ + Q L L+L D+ +K D FI+ E F+LA E + L + Sbjct: 67 DAFVRRQPKV-GSIEHLYLGQGLETFLDLADQAKEKWEDKFIAVEHFLLAFHEDK-RLGN 124 Query: 125 ILKAAGA-------------TTANIT-----QAIEQMRGGESVNDQGAEDQRQALKKYTI 166 L G TT I I+ RG V DQ E AL KY Sbjct: 125 KLIGGGTPQLPTRPGFAPPQTTLQIEFKELEATIKAFRGSSKVEDQNPEATYDALAKYGR 184 Query: 167 DLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIING 226 DLTE A+ GKLDPVIGRDEE+RR + L RRTKNNPVLIGEPGVGKTAI EGLAQRI+NG Sbjct: 185 DLTELAKVGKLDPVIGRDEEVRRVVSCLSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVNG 244 Query: 227 EVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGA 286 +VPE LK R++++LDMG+L+AGAK+RGEFEERL+ VL ++ +G ++LFIDELHT+VGA Sbjct: 245 DVPESLKERQLISLDMGSLIAGAKFRGEFEERLRSVLREVTHSDGQIVLFIDELHTVVGA 304 Query: 287 GKADGAM---DAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSV 343 G G DAGN+LKP LARGEL C+GATT+DEYR++IEKDAALERRFQKV V +PSV Sbjct: 305 GSGGGNSSGVDAGNLLKPMLARGELRCIGATTIDEYRKHIEKDAALERRFQKVEVGQPSV 364 Query: 344 EDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRM 403 EDTI+ILRGLK+RYE HH V+ITD A+VAAATLS+RYI+DR LPDKAIDL+DEAA+ ++M Sbjct: 365 EDTISILRGLKDRYETHHGVKITDAALVAAATLSNRYISDRFLPDKAIDLVDEAAAQLKM 424 Query: 404 QIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKR-------------LDMLNEELSD 450 +I SKP EL+ +DRRI+QL++E+ ++ E +K++ L+ + E++ Sbjct: 425 EITSKPVELEAIDRRIMQLEMEKLSIEGELSGTNKEKNSEAILSTKVSPALERITNEINS 484 Query: 451 KERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELE 510 +++ + +W EK L+ ++KAE ++ K+ IEQA R DL ++L+YG++ + Sbjct: 485 LKQKQEKFSSQWSGEKELLNSINSLKAEEDKIKVQIEQAERAYDLNTAAQLKYGQLETVH 544 Query: 511 KQLEAAT----QLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQEL 566 + EA +++ + LLR +VTD +IA ++A+WTGIPV+R++ESER+KLL++E+ L Sbjct: 545 RDREAQEAELLKVQAQGSFLLREQVTDGDIATIVAKWTGIPVNRLLESERQKLLQLEKHL 604 Query: 567 HHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSD 626 H RVIGQ+EAV AV+ AIRR+RAG+ DP RPIGSF+FLGPTGVGKTEL +ALA F+FD D Sbjct: 605 HQRVIGQSEAVAAVAAAIRRARAGMKDPGRPIGSFMFLGPTGVGKTELARALAGFLFDRD 664 Query: 627 EAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDV 686 +A+VR+DMSE+MEKH+V+RLVGAPPGYVGY++GG L+EAVRR PYS++L DEVEKAHPDV Sbjct: 665 DALVRVDMSEYMEKHAVARLVGAPPGYVGYDQGGQLSEAVRRHPYSLVLFDEVEKAHPDV 724 Query: 687 FNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFG-ELDYAHMKELVLGVV 745 FNILLQVLDDGR+TD QGR +DF NTV++MTSN+GS+ I + G + Y M + V+G + Sbjct: 725 FNILLQVLDDGRITDSQGRVIDFSNTVIVMTSNIGSEYILDVAGDDSKYEEMYKRVMGAL 784 Query: 746 SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSE 805 +FRPEF+NR+DE+++FH L + + I +IQ+KR+ + L E+ + ++D L ++E Sbjct: 785 RKHFRPEFLNRVDEIILFHTLRKSELRQIVEIQVKRIERLLGEQKISLQLTDATLDHITE 844 Query: 806 NGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVI 844 GYDPVYGARPLKRAIQ+++ENPLA QIL V G V+ Sbjct: 845 VGYDPVYGARPLKRAIQRELENPLANQILENRFVCGDVV 883 >UniRef50_P42730 Heat shock protein 101 n=34 Tax=Eukaryota RepID=HS101_ARATH Length = 911 Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust. Identities = 444/846 (52%), Positives = 596/846 (70%), Gaps = 14/846 (1%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAG-INAGQ 59 M ++ T+K +A A LA+ + PLHL AL++ G ++SAG NA Q Sbjct: 1 MNPEKFTHKTNETIATAHELAVNAGHAQFTPLHLAGALISDPTGIFPQAISSAGGENAAQ 60 Query: 60 -LRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES 118 INQAL +LP D+ S L++V+ + RGD ++ + ++ LE Sbjct: 61 SAERVINQALKKLPSQSPPPDDIPASSSLIKVIRRAQAAQKSRGDTHLAVDQLIMGLLED 120 Query: 119 RGTLADILKAAGATTANITQAIEQMRG--GESVNDQGAEDQRQALKKYTIDLTERAEQGK 176 + D+L G TA + +E++RG G+ V + QALK Y DL E+A GK Sbjct: 121 -SQIRDLLNEVGVATARVKSEVEKLRGKEGKKVESASGDTNFQALKTYGRDLVEQA--GK 177 Query: 177 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRR 236 LDPVIGRDEEIRR +++L RRTKNNPVLIGEPGVGKTA+VEGLAQRI+ G+VP L R Sbjct: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPNSLTDVR 237 Query: 237 VLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAG 296 +++LDMGALVAGAKYRGEFEERLK VL ++ EG VILFIDE+H ++GAGK +G+MDA Sbjct: 238 LISLDMGALVAGAKYRGEFEERLKSVLKEVEDAEGKVILFIDEIHLVLGAGKTEGSMDAA 297 Query: 297 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 356 N+ KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V+VAEPSV DTI+ILRGLKE+ Sbjct: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTISILRGLKEK 357 Query: 357 YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 416 YE HH V+I D A++ AA LS RYI R LPDKAIDL+DEA +++R+Q+DS+PEE+D L+ Sbjct: 358 YEGHHGVRIQDRALINAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417 Query: 417 RRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476 R+ +QL++E AL +E D+ASK RL + +EL D + L +++ EK + + +K Sbjct: 418 RKRMQLEIELHALEREKDKASKARLIEVRKELDDLRDKLQPLTMKYRKEKERIDEIRRLK 477 Query: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMR---LLRNKVTD 533 + E+ ++++A R DLAR ++L+YG I E+E A QLEG + +L V Sbjct: 478 QKREELMFSLQEAERRYDLARAADLRYGAIQEVES---AIAQLEGTSSEENVMLTENVGP 534 Query: 534 AEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLAD 593 IAEV++RWTGIPV+R+ ++E+E+L+ + LH RV+GQN+AV+AVS AI RSRAGL Sbjct: 535 EHIAEVVSRWTGIPVTRLGQNEKERLIGLADRLHKRVVGQNQAVNAVSEAILRSRAGLGR 594 Query: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGY 653 P +P GSFLFLGPTGVGKTEL KALA +FD + +VRIDMSE+ME+HSVSRL+GAPPGY Sbjct: 595 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 654 Query: 654 VGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTV 713 VG+EEGG LTEAVRRRPY VIL DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRN+V Sbjct: 655 VGHEEGGQLTEAVRRRPYCVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNSV 714 Query: 714 VIMTSNLGSD-LIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIA 772 +IMTSNLG++ L+ G++ ++ V+ V +FRPE +NR+DE+VVF PL + Sbjct: 715 IIMTSNLGAEHLLAGLTGKVTMEVARDCVMREVRKHFRPELLNRLDEIVVFDPLSHDQLR 774 Query: 773 SIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQ 832 +A++Q+K + RL ERG + ++D AL + YDPVYGARP++R +++++ L++ Sbjct: 775 KVARLQMKDVAVRLAERGVALAVTDAALDYILAESYDPVYGARPIRRWMEKKVVTELSKM 834 Query: 833 ILSGEL 838 ++ E+ Sbjct: 835 VVREEI 840 >UniRef50_Q3L1D0 Heat shock protein 101 n=6 Tax=Eukaryota RepID=Q3L1D0_VITVI Length = 911 Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust. Identities = 442/846 (52%), Positives = 597/846 (70%), Gaps = 14/846 (1%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGIN---A 57 M ++ T+K LA A LA+ + + PLH+ AL+ G + + AG N A Sbjct: 1 MNPEKFTHKTNETLAGAHELAMNSGHAQLTPLHVAVALITDHNGILRQAIIGAGGNEEAA 60 Query: 58 GQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALE 117 + N+AL +LP ++ S L++V+ + RGD ++ + +L LE Sbjct: 61 NSVERVFNKALKKLPTQSPPPDEIPVSTTLIKVVRRAQSSQKSRGDTHLAVDQLILGLLE 120 Query: 118 SRGTLADILKAAGATTANITQAIEQMRG--GESVNDQGAEDQRQALKKYTIDLTERAEQG 175 + D+LK AG +T+ + +E++RG G+ V + QALK Y DL E+A G Sbjct: 121 D-SQIGDLLKEAGVSTSRVKSEVEKLRGKEGKKVESASGDTTFQALKTYGRDLVEQA--G 177 Query: 176 KLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGR 235 KLDPVIGRDEEIRR I++L RRTKNNPVLIGEPGVGKTA+VEGLAQRI+ G+VP L Sbjct: 178 KLDPVIGRDEEIRRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAEV 237 Query: 236 RVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDA 295 R++ALDMGALVAGAKYRGEFEERLK VL ++ + EG VILFIDE+H ++GAG+ +G+MDA Sbjct: 238 RLIALDMGALVAGAKYRGEFEERLKSVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 297 Query: 296 GNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKE 355 N+ KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V+VAEPSV DTI+ILRGLKE Sbjct: 298 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTISILRGLKE 357 Query: 356 RYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRL 415 RYE HH V+I D A+V AA LS RYI R LPDKAIDL+DEA +++R+Q+DS+PEE+D L Sbjct: 358 RYEGHHGVRIQDRALVVAAQLSSRYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 417 Query: 416 DRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTI 475 +R+ +QL++E AL KE D+ASK RL + EL D + L ++K EK + + + Sbjct: 418 ERKRMQLEVELHALEKEKDKASKARLVEVRRELDDLRDKLQPLMMKYKKEKERIDELRRL 477 Query: 476 KAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKT--MRLLRNKVTD 533 K + E+ A+++A R DLAR ++L+YG I E+E A LEG T +L V Sbjct: 478 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEA---AIANLEGTTDENMMLTETVGP 534 Query: 534 AEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLAD 593 +IAEV++RWTGIPV+R+ ++++E+L+ + + LH RV+GQ++AV AV+ A+ RSRAGL Sbjct: 535 EQIAEVVSRWTGIPVTRLGQNDKERLIGLAERLHQRVVGQDQAVSAVAEAVLRSRAGLGR 594 Query: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGY 653 P +P GSFLFLGPTGVGKTEL KALA +FD + +VRIDMSE+ME+HSVSRL+GAPPGY Sbjct: 595 PQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGY 654 Query: 654 VGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTV 713 VG++EGG LTEAVRRRPYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDF NTV Sbjct: 655 VGHDEGGQLTEAVRRRPYSVVLFDEVEKAHIAVFNTLLQVLDDGRLTDGQGRTVDFTNTV 714 Query: 714 VIMTSNLGSD-LIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIA 772 +IMTSNLG++ L+ G+ ++ V+ V +FRPE +NR+DE+VVF PL + Sbjct: 715 IIMTSNLGAEHLLSGLVGKCTMQDARDRVMQEVRRHFRPELLNRLDEIVVFDPLSHDQLR 774 Query: 773 SIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQ 832 +A++Q+K + RL ERG + ++D AL ++ YDPVYGARP++R +++++ L++ Sbjct: 775 KVARLQMKDVASRLAERGIALAVTDAALDVVLAESYDPVYGARPIRRWLEKKVVTELSKM 834 Query: 833 ILSGEL 838 ++ E+ Sbjct: 835 LIREEI 840 >UniRef50_C0GVK9 ATPase AAA-2 domain protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GVK9_9DELT Length = 873 Score = 832 bits (2150), Expect = 0.0, Method: Compositional matrix adjust. Identities = 427/864 (49%), Positives = 602/864 (69%), Gaps = 19/864 (2%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M +D+ K Q + + LA+ ++Q + P HLMS+LLN L +G + +L Sbjct: 1 MLIDKFNLKSQELIESSSRLAVKKEHQHVTPWHLMSSLLNIGKNPTLTALQESGADLDKL 60 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG 120 ++ +L P+ + S+DL R+ ++A+K + +I +LAALE + Sbjct: 61 GGRVSTSLLAQPKALASAQQTPISRDLERLFINAQEIAEKAEEKYIGINHILLAALEIQ- 119 Query: 121 TLADILKAAGATTANITQAIEQMRGGESVNDQG----AEDQRQALKKYTIDLTERAEQGK 176 LA L+ AGA +T A++Q+R SV+ G D + L +YT DLTE A QG+ Sbjct: 120 ELAGALEEAGADREKLTLALQQVR---SVDGPGQGKAPGDDFEYLAQYTKDLTESARQGE 176 Query: 177 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRR 236 LDPVIGR+EEIR Q+L RR KNNP++IGEPGVGKTA+VEGLAQRI+NG+VPE L+ Sbjct: 177 LDPVIGREEEIRMASQILSRRLKNNPIIIGEPGVGKTAVVEGLAQRIVNGDVPESLQDVS 236 Query: 237 VLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAG 296 +LALD+G L+AGAKYRGEFEER K VL ++ GN+I FIDE+H +VGAG ++G MDA Sbjct: 237 ILALDLGQLIAGAKYRGEFEERFKRVLQEITDA-GNIITFIDEIHMLVGAGGSEGTMDAA 295 Query: 297 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 356 N++KPAL+RG++ CVGATT +EYR++IEKD+AL RRFQ V V EP + T+AILRG+K + Sbjct: 296 NLIKPALSRGDIRCVGATTSEEYRKHIEKDSALMRRFQTVTVEEPDHDKTLAILRGIKGK 355 Query: 357 YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 416 YE HH + I+D ++ A+A LS RYI+DR LPDKAIDL+D+A +++R+ + SKPE++D++D Sbjct: 356 YETHHGIHISDSSLGASAKLSQRYISDRFLPDKAIDLMDQAGAALRISLASKPEDIDKID 415 Query: 417 RRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476 ++I++L++E AL E+D S +RL+++ L+D + Q + E W+ +K + + Sbjct: 416 QQIVELEIEAGALQGETDRLSMQRLEVVQNTLADLKEQSRTMTEAWEQQKEAAETLAKAR 475 Query: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQL------EAATQLEGKTMRLLRNK 530 L+ AK +EQ R D +R++ELQY IPE E+ L +A + E + R L + Sbjct: 476 KTLDDAKKELEQKVRQEDFSRVAELQYKIIPEAEQVLAEYENFDADQEPENGSPRALLPQ 535 Query: 531 VTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590 +IA ++RWTGIPVS++ME E+E+ L++E L RV+GQ++ ++ +S A+RRSRAG Sbjct: 536 ----DIAACVSRWTGIPVSKLMEEEKERWLQLEDYLRKRVVGQDQVLETISKAVRRSRAG 591 Query: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAP 650 + DPNRP+GSFL LGPTGVGKTE+ KALA F+FD + ++VRIDMSEFMEKHSV+RL GAP Sbjct: 592 VQDPNRPLGSFLMLGPTGVGKTEMAKALAEFLFDDERSLVRIDMSEFMEKHSVARLTGAP 651 Query: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFR 710 PGYVGYEEGG LT +RRRPYSV+L DEVEKAHPD FN+ LQVLDDGRLTDGQGRT F Sbjct: 652 PGYVGYEEGGVLTNKIRRRPYSVVLFDEVEKAHPDAFNLFLQVLDDGRLTDGQGRTTHFY 711 Query: 711 NTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQH 770 NTV++MTSNLG++ I+ E + M+ ++ VV FRPEF+NR+D++++ +PL + Sbjct: 712 NTVILMTSNLGAETIEPAETEEEVQKMRSTLMDVVRGFFRPEFLNRLDDILICNPLTPEV 771 Query: 771 IASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLA 830 + I IQLKRL K L +RG E+ ISDEA LL+++G++P+YGARPLKRAIQ +++PLA Sbjct: 772 MPPIVDIQLKRLNKLLADRGIEMDISDEAKHLLAQDGFNPLYGARPLKRAIQTSLQDPLA 831 Query: 831 QQILSGELVPGKVIRLEVNEDRIV 854 + ++ + G I ++V + R+ Sbjct: 832 EMLIKEGMDEGGSINVDVEDGRLT 855 >UniRef50_B5HY88 Chaperone protein clpB n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5HY88_9ACTO Length = 861 Score = 826 bits (2133), Expect = 0.0, Method: Compositional matrix adjust. Identities = 454/810 (56%), Positives = 583/810 (71%), Gaps = 7/810 (0%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALL-NQEGGSVSPLLTSAGINAGQLRTDI 64 LTN+ + A+ A + A+ + + P HL+ ALL Q+ ++ LL + + +R Sbjct: 14 LTNRSRDAINAAGNRAVTEGHPDLTPAHLLLALLQGQDNENIVDLLAAVDADQAAVRAGA 73 Query: 65 NQALNRLPQVEG-TGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLA 123 +AL LP V G T QP++DL+ V+ A+ GD ++S+E ++ G A Sbjct: 74 EKALGSLPSVAGSTVAPPQPNRDLLAVIADAQSRAKDLGDEYLSTEHLLVGIAAKGGPAA 133 Query: 124 DILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGR 183 ++L GAT + A ++ RGG V E Q +AL+K+ D T A GKLDPVIGR Sbjct: 134 EVLTGQGATPKKLIDAFQKARGGRRVTTADPEGQYKALEKFGTDFTAAARDGKLDPVIGR 193 Query: 184 DEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMG 243 D+EIRR +QVL RRTKNNPVLIGEPGVGKTA+VEGLAQRI+ G+VPE LK +R+++LD+ Sbjct: 194 DQEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPESLKDKRLVSLDLS 253 Query: 244 ALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKA-DGAMDAGNMLKPA 302 A+VAGAKYRGEFEERLK VL ++ +G +I FIDELHT+VGAG D +MDAGNMLKP Sbjct: 254 AMVAGAKYRGEFEERLKTVLAEIRDSDGQIITFIDELHTVVGAGAGGDSSMDAGNMLKPM 313 Query: 303 LARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHH 362 LARGEL VGATTLDEYR+ IEKD ALERRFQ+V VAEP+VEDTIAILRGLK RYE HH Sbjct: 314 LARGELRMVGATTLDEYRERIEKDPALERRFQQVLVAEPTVEDTIAILRGLKGRYEAHHK 373 Query: 363 VQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQL 422 VQI D A+VAAA LS RYI R LPDKAIDL+DEAAS +RM+IDS P E+D L R + +L Sbjct: 374 VQIADSALVAAAALSDRYITSRFLPDKAIDLVDEAASRLRMEIDSSPLEIDELQRGVDRL 433 Query: 423 KLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQA 482 K+E+ AL+KE+D AS++RL+ L +L+DKE + L W+ EK SL+ +K +L++ Sbjct: 434 KMEELALVKETDPASRERLERLRRDLADKEEELRGLTARWEKEKQSLNRVGELKEKLDEL 493 Query: 483 KIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMR--LLRNKVTDAEIAEVL 540 + E+A+R GD S+L YG+IP LE+ LEAA++ E + + +++ +V +IA+ + Sbjct: 494 RGQAERAQRDGDFDTASKLLYGEIPTLERDLEAASEAEEEVSKDTMVKEEVGADDIADTV 553 Query: 541 ARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGS 600 A WTGIP R++E E +KLLRME+EL R+IGQ EAV AVS+A+RR+RAG+ADP+RP GS Sbjct: 554 AAWTGIPAGRLLEGETQKLLRMEEELGKRLIGQGEAVRAVSDAVRRTRAGIADPDRPTGS 613 Query: 601 FLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG 660 FLFLGPTGVGKTEL KALA+F+FD + AMVRIDMSE+ EKH+VSRLVGAPPGYVGYEEGG Sbjct: 614 FLFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVSRLVGAPPGYVGYEEGG 673 Query: 661 YLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL 720 LTEAVRRRPYSV+LLDEVEKAHP+VF+ILLQVLDDGRLTDGQGRTVDFRN ++++TSNL Sbjct: 674 QLTEAVRRRPYSVVLLDEVEKAHPEVFDILLQVLDDGRLTDGQGRTVDFRNAILVLTSNL 733 Query: 721 GSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLK 780 GS + + KE VL VV +F+PEF+NR+D++VVF L + + IA++Q+ Sbjct: 734 GSQFLVDPI--TSETEKKEQVLEVVRASFKPEFLNRLDDLVVFSALTKDELGRIARLQID 791 Query: 781 RLYKRLEERGYEIHISDEALKLLSENGYDP 810 RL KRL ER L S G+ P Sbjct: 792 RLAKRLAERRAHPGGHRRGPGLASRRGHGP 821 >UniRef50_B5Y5I5 Predicted protein n=4 Tax=cellular organisms RepID=B5Y5I5_PHATR Length = 997 Score = 823 bits (2127), Expect = 0.0, Method: Compositional matrix adjust. Identities = 424/830 (51%), Positives = 593/830 (71%), Gaps = 24/830 (2%) Query: 46 VSPLLTSAGINAGQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNF 105 V +L AG+N +LR ++++ L + P+V + + L +VL Q GD++ Sbjct: 142 VEKILNKAGVNLNRLRCELDEYLAKQPRVSDPTNKIM-GRTLQKVLETARNGKQALGDSY 200 Query: 106 ISSELFVLAALESRGTLA-DILKAAGATTANITQAIEQMR--GGESVNDQGAEDQRQALK 162 +S+E VLA ++ + L ++ + +++MR G +++ + AE AL Sbjct: 201 VSTEGLVLAMVKEDDKFTREALMRQNVKYTDVLEVVKEMRKKSGPAIS-RSAESMYDALT 259 Query: 163 KYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQR 222 KY +DLTERAEQGKLDPVIGRD+EIRR IQ+L RRTKNNPVLIG+PGVGKTAI EG+AQR Sbjct: 260 KYGVDLTERAEQGKLDPVIGRDDEIRRAIQILSRRTKNNPVLIGDPGVGKTAIAEGIAQR 319 Query: 223 IINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHT 282 +I+G+VP+ LK R++ LDMGALVAGA RG+FEERLK V+ ++ + +G +ILFIDE+HT Sbjct: 320 MIDGDVPDSLKNCRLIGLDMGALVAGASMRGQFEERLKAVVEEVTQSDGEIILFIDEMHT 379 Query: 283 MVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPS 342 +VGAG A G+MDA N+LKPALARG+L C+GATT++EYR+YIEKD ALERRFQ+V + +P+ Sbjct: 380 VVGAGAAQGSMDASNLLKPALARGQLRCIGATTINEYRKYIEKDKALERRFQQVMIDQPT 439 Query: 343 VEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIR 402 EDT++ILRGLK RYELHH V+I D A++AAA LSHRYI DR LPDKAIDL+DEA + + Sbjct: 440 PEDTVSILRGLKPRYELHHGVRIRDEALLAAAKLSHRYIPDRFLPDKAIDLVDEACAKLN 499 Query: 403 MQIDSKPEELDRLDRRIIQLKLEQQALMKESDE-----------ASKKRLDMLNEELSDK 451 +I SKP LD +DRRIIQL++E+ +L + ++ + RL ++EEL Sbjct: 500 NEITSKPTILDEIDRRIIQLEMERLSLQSDFEKYEEDGNTFKATSENFRLAKIDEELGSL 559 Query: 452 ERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEK 511 + + EL +W AEK ++ + +K ++ + K+ IE+ R DL + +EL+Y +P LE+ Sbjct: 560 KYEQQELNMKWMAEKGAVDRLKDVKEKIAKVKLDIEKFEREFDLNKAAELKYSDLPPLER 619 Query: 512 QLEAATQLEGKTM-----RLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQEL 566 +LE + + R+LR++V +IA V+A WTGIP +++ESER+++L M +L Sbjct: 620 ELEELENIGQYDLGPGEERMLRDEVVADDIAGVVAVWTGIPPGKLLESERDRILTMGDKL 679 Query: 567 HHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSD 626 R+IGQ+EA+ V+ A++RSRAGL DP++PI S +FLGPTGVGKTE KALA FMFDS+ Sbjct: 680 RERLIGQDEAIRVVTEAVQRSRAGLNDPSKPIASLIFLGPTGVGKTECAKALAEFMFDSE 739 Query: 627 EAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDV 686 +A++RIDMSE+MEKH+VSRL+GAPPGYVGY+EGG LT+A+RRRPY+V+L DE+EKAHPDV Sbjct: 740 DALIRIDMSEYMEKHTVSRLLGAPPGYVGYDEGGQLTDAIRRRPYAVLLFDEMEKAHPDV 799 Query: 687 FNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGEL---DYAHMKELVLG 743 FN++LQ+LDDGRLTD +G TV+FRNT+ I TSN+GS I + G D M+ V Sbjct: 800 FNVMLQLLDDGRLTDSKGNTVNFRNTICIFTSNVGSQEILDLNGSSEIGDQEIMRSRVTE 859 Query: 744 VVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLL 803 + FRPEF+NRIDE V+F+ L + ++ I ++++RL KRLEE+ + + +EAL L Sbjct: 860 AMRERFRPEFLNRIDEHVIFNSLNKNNLRGIVVLEVRRLEKRLEEKQMRLVLREEALDFL 919 Query: 804 SENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRI 853 +E G+DPVYGARPLKR IQ+++E +A+ IL GE V G I ++V +R+ Sbjct: 920 AEVGFDPVYGARPLKRTIQRELETVVARGILGGEFVDGDTILVDVVNERL 969 >UniRef50_C9RKR5 ATPase AAA-2 domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKR5_FIBSS Length = 855 Score = 822 bits (2122), Expect = 0.0, Method: Compositional matrix adjust. Identities = 432/844 (51%), Positives = 581/844 (68%), Gaps = 13/844 (1%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 TN + LA AQSL + ++ HL L+ ++ L S G+ +LR + Sbjct: 4 FTNDAEKVLAKAQSLRDRCSHSYLGAAHLAVGLVEGPDATLKKLYKSKGVKPNELRGRLE 63 Query: 66 QALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFV-LAALESRGTLAD 124 + ++P++EG DV+P DL R+L + A++ +L V L LA Sbjct: 64 PFVQKIPRMEGVNPDVEPDSDLNRILRAAVQAARQVSRMVTPGDLLVALMKFSGDRGLAK 123 Query: 125 ILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRD 184 + + A +T + + G + AE+Q LK Y +L E A GKL PVIGR+ Sbjct: 124 VFEDALGSTEVVETWLSDPFAGAA----NAEEQ-SPLKLYGRELVEMAADGKLSPVIGRE 178 Query: 185 EEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGA 244 EEIRR I +L R+TKNNP L+GEPGVGKTAIVEGLA+RI G+VP+ LKG++V ALD+ A Sbjct: 179 EEIRRVILILSRKTKNNPCLVGEPGVGKTAIVEGLAERIYRGDVPDALKGKKVFALDLSA 238 Query: 245 LVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALA 304 L+AGAKYRG+FEERLK V+ D +++GN ++FIDELH +VGAGK +G+MD GNMLKP LA Sbjct: 239 LMAGAKYRGDFEERLKSVI-DAIEEDGNTLMFIDELHNIVGAGKTEGSMDLGNMLKPKLA 297 Query: 305 RGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQ 364 RGELHC+GATT EYR+YIEKD+ALERRFQ V V+EPS ++ I+ILRG+K+ ++ HH V+ Sbjct: 298 RGELHCIGATTTQEYRKYIEKDSALERRFQPVQVSEPSEDEAISILRGIKDGFDAHHGVR 357 Query: 365 ITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKL 424 + D A+VAA LS+RYI+DR LPDKAIDLIDEAAS ++ Q+D+ PE LD L R+ +Q+K+ Sbjct: 358 LHDNALVAAVKLSNRYISDRFLPDKAIDLIDEAASLVKTQMDTVPEALDTLQRKELQMKI 417 Query: 425 EQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKI 484 E+QAL KE+DEAS KRL L E+L+ + +++E W+ +A+ + Q +K L+ AK Sbjct: 418 EEQALSKETDEASVKRLKELREDLAVTDAAVKQMQERWQDRRAAFAEVQDLKKALKAAKD 477 Query: 485 AIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRL--LRNKVTDAEIAEVLAR 542 +EQA DL R +EL+Y KI +EK+L T+ K+ L +VT+ IA V++R Sbjct: 478 EMEQAEARYDLNRAAELKYNKIVNIEKELAQKTEALRKSAEEGGLSEEVTEETIALVVSR 537 Query: 543 WTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFL 602 WTGIPV+++ E E+ KLL +++ LH RVIGQ+EAV+AVS AI R+R+GL+ N PIGSFL Sbjct: 538 WTGIPVTKLCEGEKAKLLHLDERLHARVIGQDEAVEAVSEAILRNRSGLSRENAPIGSFL 597 Query: 603 FLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYL 662 FLGPTGVGKTEL KALA +FDS+ A+VRIDMSE+MEKHSVSRL+GAPPGYVGYEEGG L Sbjct: 598 FLGPTGVGKTELAKALAVELFDSENALVRIDMSEYMEKHSVSRLIGAPPGYVGYEEGGQL 657 Query: 663 TEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGS 722 TEAVR PY VILLDE+EKAHPDVFN LLQVLDDGRLTDG+GRTV+F+NT+++MTSNLG+ Sbjct: 658 TEAVRTHPYCVILLDEIEKAHPDVFNTLLQVLDDGRLTDGKGRTVNFKNTLILMTSNLGA 717 Query: 723 DLIQERFGELDYAHMKELVLGVVSHN----FRPEFINRIDEVVVFHPLGEQHIASIAQIQ 778 + + ++ L V + FRPEF+NR+DEV+VF L ++ I I +++ Sbjct: 718 EKFRLSAANAKNGEPPQVALADVEADLHAFFRPEFLNRLDEVLVFQSLSKKQIREIVKLK 777 Query: 779 LKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGEL 838 L R + + +SD AL ++E Y P +GARP++R I++ IE PL+ ILSG + Sbjct: 778 FADLANRAARQDLVLTLSDAALDAIAEGAYQPEFGARPIQRYIERNIERPLSHAILSGTV 837 Query: 839 VPGK 842 K Sbjct: 838 SAAK 841 >UniRef50_Q4FXS7 Serine peptidase, putative n=12 Tax=cellular organisms RepID=Q4FXS7_LEIMA Length = 867 Score = 819 bits (2116), Expect = 0.0, Method: Compositional matrix adjust. Identities = 409/840 (48%), Positives = 593/840 (70%), Gaps = 5/840 (0%) Query: 14 LADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQALNRLPQ 73 +A +LA N +++P+HL + E S ++ G A ++ + ++ +P Sbjct: 16 MARMAALARKKANGYLDPVHLAYVMFEDENSLASRVVRKLG--AASVKDGLEARVDAIPT 73 Query: 74 VEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAGATT 133 +P+ D++RV+N ++ GD ++++ F+LA ES+ + IL AAGA Sbjct: 74 QMPAPTQPRPNSDMMRVMNTAEQERAALGDTLMAADHFLLALHESK-EVGRILDAAGAGK 132 Query: 134 ANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQV 193 I + +MR G+ + +D ++L KY +DL ++AE GKLDPVIGR +EI RTI+V Sbjct: 133 KAIRATLLEMRKGKKITSDFQDDNYESLNKYAVDLCKQAEDGKLDPVIGRADEILRTIRV 192 Query: 194 LQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRG 253 L RRTKNNPVLIGEPGVGKTAIVEG+AQ+++ G+VP+ L G R+ +LDMGAL+AGAKYRG Sbjct: 193 LSRRTKNNPVLIGEPGVGKTAIVEGIAQQVVRGDVPDTLSGIRIFSLDMGALIAGAKYRG 252 Query: 254 EFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGA 313 EFEERLK VLN++ + + +ILFIDE+H ++GAGK+DGAMDA N+LKP LARGEL +GA Sbjct: 253 EFEERLKAVLNEVKESDNKIILFIDEIHLVLGAGKSDGAMDAANLLKPLLARGELRTIGA 312 Query: 314 TTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAA 373 TTL+EYRQY+EKDAA ERRF V V EPSVE+ +ILRGLK+RYE HH VQITD A+V A Sbjct: 313 TTLEEYRQYVEKDAAFERRFMPVQVHEPSVEECTSILRGLKDRYEQHHGVQITDKAVVVA 372 Query: 374 ATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKES 433 A L+ RYI +R LPDKAIDLIDEA +++R+ + S+P E+D L+R+ QL++E++AL ++ Sbjct: 373 AQLAGRYITNRFLPDKAIDLIDEACANVRVTLSSRPAEIDALERKKRQLEIEERALQRDK 432 Query: 434 DEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVG 493 D ++K+RL + E+ E + L +++ E+ + Q +A+L++ K+ +E+A R+ Sbjct: 433 DASAKERLKAVKAEIQKVEEKLGPLLAKYEQERGRIDELQATQAKLDEKKVKLERAERMR 492 Query: 494 DLARMSELQYGKIPELEKQLEAATQ-LEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMM 552 D+ ++L+Y IP L+ ++ + + +E + +L+ VT+ +IA V++RWT IPV+++ Sbjct: 493 DMETAADLKYNVIPILQDRIRSLKEAIEKQKATMLQGTVTETDIATVVSRWTNIPVTKLS 552 Query: 553 ESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKT 612 ++ERE+LL + +LH RV GQ+EAV V+ AI RSRAGLA +RP GSFLFLGPTGVGKT Sbjct: 553 QTERERLLHLADQLHLRVKGQDEAVSRVAEAILRSRAGLARSDRPTGSFLFLGPTGVGKT 612 Query: 613 ELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYS 672 EL KA+A+ +FD + MVR+DMSE+ME+HSV+RL+GAPPGYVG+EEGG LTE VRRRPY+ Sbjct: 613 ELSKAVASELFDDAKYMVRLDMSEYMEQHSVARLIGAPPGYVGHEEGGQLTEPVRRRPYT 672 Query: 673 VILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQER-FGE 731 V+LLDEVEKAHP+VFN+LLQVLDDGRLTD GRTVDF NT++IMTSNLG+ +Q Sbjct: 673 VVLLDEVEKAHPNVFNVLLQVLDDGRLTDSHGRTVDFCNTIIIMTSNLGAQYLQNMDTSP 732 Query: 732 LDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGY 791 Y + V+G V FRPEFINR+D++++F LG + + I + + L RL+++ Sbjct: 733 KAYEVAQAQVMGEVRKFFRPEFINRLDDIILFRSLGLKEMTGIIDLITEELNGRLKDQSI 792 Query: 792 EIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNED 851 + +++EA + + E+ +D GARPL+R +++ I L++ I+S EL P +++ ++ + Sbjct: 793 RVSLTEEAKQYVLESAFDADMGARPLRRWVEKNITTELSRMIISQELSPNSTVKVTLSSN 852 >UniRef50_Q9ZMH1 Chaperone protein clpB n=85 Tax=Bacteria RepID=CLPB_HELPJ Length = 856 Score = 817 bits (2111), Expect = 0.0, Method: Compositional matrix adjust. Identities = 416/858 (48%), Positives = 607/858 (70%), Gaps = 15/858 (1%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +++T++ L A +LAL H N + P+H++ A+LN G + L ++ L+ Sbjct: 4 FEKMTDQLHETLDSAIALALHHKNAEVTPMHMLFAMLNNSQGILIQALQKMPVDIEALKL 63 Query: 63 DINQALNRLPQV-EGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGT 121 + LN+ +V + + ++Q +Q L++ L L KRGD+FI+++ ++LA + Sbjct: 64 SVQSELNKFAKVSQISKQNIQLNQALIQSLENAQGLMAKRGDSFIATDAYLLANM---NL 120 Query: 122 LADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVI 181 +LK T + + +E +R G ++ D+ + ++L+K+ IDLT++A + KLDPVI Sbjct: 121 FESVLKPY-LDTKELQKTLESLRKGRTIQDKNDDSNLESLEKFGIDLTQKALENKLDPVI 179 Query: 182 GRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALD 241 GRDEEI R +Q+L R+TKNNP+L+GEPGVGKTA+VEGLAQRI+N EVP+ L +RV+ALD Sbjct: 180 GRDEEIIRMMQILIRKTKNNPILLGEPGVGKTAVVEGLAQRIVNKEVPKTLLNKRVVALD 239 Query: 242 MGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKP 301 + LVAGAKYRGEFEERLK V+ ++ K+ NVILFIDE+HT+VGAG ++G MDA N+LKP Sbjct: 240 LSLLVAGAKYRGEFEERLKKVIEEV-KKSANVILFIDEIHTIVGAGASEGGMDAANILKP 298 Query: 302 ALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHH 361 ALARGELH +GATTL EYR+Y EKD AL+RRFQ + + EPS+ + + ILRGLKE E HH Sbjct: 299 ALARGELHTIGATTLKEYRKYFEKDMALQRRFQPILLNEPSINEALQILRGLKETLETHH 358 Query: 362 HVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQ 421 ++ I D A++A+A LS RYI DR LPDKAIDLIDE A+ ++MQ++S+P +L + R I + Sbjct: 359 NITINDSALIASAKLSSRYITDRFLPDKAIDLIDEGAAQLKMQMESEPAKLSSVKRSIQR 418 Query: 422 LKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQ 481 L++E+QAL E+ E++ KR+ + +ELSD + + +LE +++ EK +K E+E Sbjct: 419 LEMEKQALEMENKESNHKRMQEILKELSDLKEEKIQLEAQFENEKEVFKEISRLKMEMEG 478 Query: 482 AKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMR----LLRNKVTDAEIA 537 K E+ +R GD + +E++Y KIPE EK+ E Q + +TM+ LL+N +T+ IA Sbjct: 479 LKKEAERFKRNGDYQQAAEIEYSKIPEKEKK-EKELQHKWETMQQNGALLQNALTENNIA 537 Query: 538 EVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRP 597 E++++WT IPV +M++SE+ ++L +E EL RV+GQ +A+ A++ AI+R++AGL+D N+P Sbjct: 538 EIVSQWTHIPVQKMLQSEKNRVLNIESELQKRVVGQEKALKAIAKAIKRNKAGLSDSNKP 597 Query: 598 IGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYE 657 IGSFLFLGPTGVGKTE KALA F+FDSD+ ++RIDMSE+MEKH++SRL+GA PGYVGYE Sbjct: 598 IGSFLFLGPTGVGKTESAKALAQFLFDSDKNLIRIDMSEYMEKHAISRLIGAAPGYVGYE 657 Query: 658 EGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMT 717 EGG LTEAVRR+PYSV+LLDEVEKAHPDVFN+LLQVLD+G LTD +G VDF+NT++I+T Sbjct: 658 EGGQLTEAVRRKPYSVVLLDEVEKAHPDVFNLLLQVLDEGHLTDSKGVRVDFKNTILILT 717 Query: 718 SNLGSD-LIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQ 776 SN+ S L++E E D ++ + + F+PEF+NR+DE++ F+ L I +I Sbjct: 718 SNVASGALLEEDLSEADK---QKAIKESLRQFFKPEFLNRLDEIISFNALDSHAIINIVG 774 Query: 777 IQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSG 836 I + + K+ ERG I + ++A +L++E G+D YGARPLKRA+ + +E+ LA+ IL Sbjct: 775 ILFENVQKKALERGINITLDEKAKELIAEAGFDRFYGARPLKRALYEMVEDKLAELILED 834 Query: 837 ELVPGKVIRLEVNEDRIV 854 ++ + V + IV Sbjct: 835 KIKENDSVAFVVENNEIV 852 >UniRef50_D1B2U8 ATPase AAA-2 domain protein n=4 Tax=Bacteria RepID=D1B2U8_SULD5 Length = 856 Score = 813 bits (2101), Expect = 0.0, Method: Compositional matrix adjust. Identities = 415/862 (48%), Positives = 603/862 (69%), Gaps = 23/862 (2%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 ++LTN+ + A+ A SLAL N PLH+ L+ ++ + I+ + Sbjct: 5 FEQLTNQMREAIESAISLALHSKNNEATPLHVTWGLITNSASILNQVFNKMNIDKSAIEL 64 Query: 63 DINQALNRLPQVEGTGG-DVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESR-- 119 ++ + +LP ++ S+ LV L + L +++GD+++S + ++LA +E+ Sbjct: 65 EVKSEVQKLPTASHVSKENISLSRTLVESLQKAEGLMKQKGDSYLSVDTWLLANIENEPL 124 Query: 120 ----GTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQG 175 G D+L + +E +RGG+ ++ Q A++ ++L+KY I+LT+ A +G Sbjct: 125 KKILGKYLDLLA--------FKKNLEALRGGKKIDKQSADENLESLEKYGINLTKLASEG 176 Query: 176 KLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGR 235 KLDPVIGRDEEI+R +Q+L R+TKNNP+LIGEPG GKTAI EGLA RI + +VP L+ + Sbjct: 177 KLDPVIGRDEEIQRMMQILIRKTKNNPILIGEPGTGKTAIAEGLALRIAHNDVPLSLQNK 236 Query: 236 RVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDA 295 V+ALDM AL+AGAKYRGEFE+RLK V++++ K+ GNVILFIDE+HT+VGAG ++G+MDA Sbjct: 237 SVVALDMSALIAGAKYRGEFEDRLKAVIDEV-KKSGNVILFIDEIHTIVGAGASEGSMDA 295 Query: 296 GNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKE 355 N+LKPALARGELH +GATTL EYR+Y EKDAAL+RRFQ V V EPS+ + + ILRG+KE Sbjct: 296 ANILKPALARGELHTIGATTLREYRKYFEKDAALQRRFQPVTVNEPSINEALQILRGIKE 355 Query: 356 RYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRL 415 E HH+V I D A++AAA LS RYI+DR LPDKAIDLIDEAA+ ++MQI+S+P EL R+ Sbjct: 356 HLEAHHNVSIQDSALIAAAKLSSRYISDRFLPDKAIDLIDEAAAELKMQIESEPTELSRI 415 Query: 416 DRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTI 475 R I L +E++AL+ E ++ + +RL + +EL D + + LE +++ EK + I Sbjct: 416 KRAISTLMVEKEALLMEKNKKNDERLSAIEKELGDAKEKMRSLETQFENEKQVFNDIAAI 475 Query: 476 KAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMR---LLRNKVT 532 K++ E + E A++ + + +E++YGK+PEL K+ E K + LL+N V Sbjct: 476 KSQAEALRREAEIAKKQSEFNKAAEIEYGKLPELLKKEEELKLKWEKMVESGTLLKNSVD 535 Query: 533 DAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLA 592 + IA ++++WTGIPV++M++SE+ K+L +E+ L V+GQ+ A+ A+ AI+R++AGL+ Sbjct: 536 EEMIATIVSKWTGIPVNKMLQSEKAKVLHVEEYLKKEVVGQDAAIKAIGRAIKRNKAGLS 595 Query: 593 DPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPG 652 + N+PIGSFLFLGPTGVGKT+ KALANF+FD+ +A++R DMSE+MEKHSVSRLVGAPPG Sbjct: 596 EQNKPIGSFLFLGPTGVGKTQSAKALANFLFDTTKALIRFDMSEYMEKHSVSRLVGAPPG 655 Query: 653 YVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNT 712 YVGY+EGG LTEAVRR+PYSV+L DE+EKAHPDVFNILLQVLD+GRLTD +G TVDF+NT Sbjct: 656 YVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNILLQVLDEGRLTDNKGVTVDFKNT 715 Query: 713 VVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIA 772 ++I+TSN+ S I E GE E V+ + +F+PEF+NR+D++++F+PL E + Sbjct: 716 IIILTSNIASSKIMEFEGE----KRTEEVMKELRMHFKPEFLNRLDDIIIFNPLSEDGLR 771 Query: 773 SIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQ 832 I I + K+L + + ++ A L++E G+DPVYGARPLKRA+ + +E+ LA+ Sbjct: 772 EIVTIMFGDIEKKLAHKEIKAELTTTAKSLIAEAGFDPVYGARPLKRALYELVEDKLAEL 831 Query: 833 ILSGELVPGKVIRLEVNEDRIV 854 IL +L G+ I ++ +IV Sbjct: 832 ILEDKLHEGEGIVIDAENGKIV 853 >UniRef50_Q4FY62 Serine peptidase, putative n=12 Tax=cellular organisms RepID=Q4FY62_LEIMA Length = 817 Score = 804 bits (2077), Expect = 0.0, Method: Compositional matrix adjust. Identities = 402/698 (57%), Positives = 519/698 (74%), Gaps = 3/698 (0%) Query: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220 LKKY DLTE A G+LDP++GR+E IRRTIQV+ RRTKNNPVLIGEPGVGKTAIVEGLA Sbjct: 102 LKKYARDLTEEARTGRLDPIVGREEVIRRTIQVVSRRTKNNPVLIGEPGVGKTAIVEGLA 161 Query: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280 QRI+ GEVPE +K R+V ALDMG LVAGAK+RGEFEERLKGVL D + G VILFIDEL Sbjct: 162 QRIVKGEVPESIKDRQVYALDMGTLVAGAKFRGEFEERLKGVLKDTIESHGKVILFIDEL 221 Query: 281 HTMVGAGKA-DGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVA 339 HT+VGAG + DG+MDA N+LKP+LARGELHC+GATTLDEYRQ+IEKDAAL RRFQ V V Sbjct: 222 HTLVGAGSSGDGSMDAANLLKPSLARGELHCIGATTLDEYRQHIEKDAALARRFQSVLVT 281 Query: 340 EPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAAS 399 EP+VE+TI+ILRG+KE+YE HH I D A+V AA SHRY+++R+LPDKAIDLIDEAAS Sbjct: 282 EPTVEETISILRGIKEKYEAHHGCLIKDEALVYAAVNSHRYLSERRLPDKAIDLIDEAAS 341 Query: 400 SIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELE 459 +R+Q +SKPE LD ++R +I+LK+E +A+ K+ DE K++L+ L E++S K+++Y LE Sbjct: 342 RLRLQQESKPEALDLIERELIRLKIEAEAVKKDKDEVGKEKLENLYEQISQKQKEYDALE 401 Query: 460 EEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQL 519 E WK EK + EL+ + +EQA GD A+ E+Q+ +IP L KQ+E L Sbjct: 402 ERWKKEKNLFQTIKQRTEELDVLRHHLEQAMNSGDFAKAGEIQHSQIPNLLKQIEKDKHL 461 Query: 520 EGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDA 579 ++ + VT +IAEV+AR TGIPV+++M SEREKL+ M+ EL ++GQ+ A+++ Sbjct: 462 ASSKNFMVHDSVTSKDIAEVIARATGIPVAQLMTSEREKLIHMDAELKKTIMGQDAAIES 521 Query: 580 VSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFME 639 ++N +R SRAGL RP+GSFLFLGPTGVGKTE+CK+LA F+FD + + RIDMSE+ME Sbjct: 522 ITNVVRISRAGLHSHKRPLGSFLFLGPTGVGKTEVCKSLAKFLFDDESFICRIDMSEYME 581 Query: 640 KHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRL 699 +HSV RL+GAPPGYVGYEEGG LTE+VRRRPY ++L DE EKAHP V NILLQVLD+G L Sbjct: 582 RHSVHRLIGAPPGYVGYEEGGELTESVRRRPYQIVLFDEFEKAHPSVSNILLQVLDEGHL 641 Query: 700 TDGQGRTVDFRNTVVIMTSNLGSDLIQE-RFGELDYAHMKELVLGVVSHNFRPEFINRID 758 TD GR VDF+NT++I+TSN+G+D+I G+ + M V+ V PEFINR+D Sbjct: 642 TDSHGRRVDFKNTIIILTSNIGADVIARLPEGKPSISAMPA-VMEQVRQRLAPEFINRLD 700 Query: 759 EVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLK 818 ++++F+ L + I SI +I ++ K L E + S E LS NGY VYGARPLK Sbjct: 701 DIIMFNRLSREDIRSIVEILFAQVQKMLTEHNITLEESTEVYDWLSVNGYSAVYGARPLK 760 Query: 819 RAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAV 856 R +Q ++ N LA +L G + G+ +RL V + +V V Sbjct: 761 RLVQSELLNQLALMLLDGRVREGEHVRLSVQDGHVVVV 798 >UniRef50_C4R0B7 Oligomeric mitochondrial matrix chaperone n=48 Tax=cellular organisms RepID=C4R0B7_PICPG Length = 824 Score = 803 bits (2075), Expect = 0.0, Method: Compositional matrix adjust. Identities = 392/715 (54%), Positives = 537/715 (75%), Gaps = 11/715 (1%) Query: 145 GGESVNDQGA-EDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPV 203 GG +N G E++ AL+KY ++LT+ A+ GKLDPVIGRDEEIRRTIQ+L RRTKNNP Sbjct: 75 GGPQINMNGQQEEELPALQKYGVNLTQLAKDGKLDPVIGRDEEIRRTIQILSRRTKNNPA 134 Query: 204 LIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVL 263 LIG G GKTAI+EGLAQRII GEVPE +K + V+ALD+G+L++GAK+RGEFEERLK VL Sbjct: 135 LIGNAGTGKTAIMEGLAQRIIKGEVPESMKDKEVVALDLGSLISGAKFRGEFEERLKAVL 194 Query: 264 NDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYI 323 +L + GN+ILFIDELH ++G GKA+G++DA N+LKPALARG+L C GATT++EYR+YI Sbjct: 195 KELDEAHGNIILFIDELHILLGLGKAEGSIDASNLLKPALARGQLQCCGATTIEEYRKYI 254 Query: 324 EKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIAD 383 EKDAAL RRFQ V V EPSV+D I+ILRGLKE+YE+HH V+ITD A+V AA S+RYI D Sbjct: 255 EKDAALARRFQSVLVNEPSVQDAISILRGLKEKYEIHHGVRITDSALVTAAVYSNRYITD 314 Query: 384 RQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDM 443 R LPDKAIDL+DEA S++R+Q +SKP+ + +LDR+I+ +++E ++L KE+D S +R D Sbjct: 315 RFLPDKAIDLVDEACSALRLQHESKPDVIQQLDRQIMTIQIELESLRKETDPISVERRDK 374 Query: 444 LNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQY 503 L+E+L K+ + L + W+ EK SL +T K ELEQ+K+ +E+A+R GD + S L+Y Sbjct: 375 LDEQLKLKKEELERLTQVWEDEKNSLEKIKTAKEELEQSKLELERAQREGDFGKASMLRY 434 Query: 504 GKIPELEKQLEAATQ--LEGK---TMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 558 KIPELE+++ A Q EG+ T LL VT +IA V+++ TG+PV +M+ E++K Sbjct: 435 SKIPELEQKVSATAQRVKEGESETTTNLLHESVTSDDIAWVVSKMTGVPVQSLMKGEKDK 494 Query: 559 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 618 LL ME+ + RVIGQ+EA+ +V++A+R RAGL + RPI SF+FLGPTG GKTEL K+L Sbjct: 495 LLYMEESIKSRVIGQDEAIHSVADAVRLQRAGLTNEKRPIASFMFLGPTGTGKTELTKSL 554 Query: 619 ANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678 A F+F+ + A+VR DMSEF E+HS+SRL+GAPP YVG+EEGG LTEAVRR+PY+V+L DE Sbjct: 555 AEFLFNDENAVVRFDMSEFQERHSLSRLIGAPPSYVGFEEGGELTEAVRRKPYAVVLFDE 614 Query: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLI-----QERFGELD 733 EKAH D+ ++LQ+LD+G LTD QG +DF+NT++IMTSNLG DL+ E G Sbjct: 615 FEKAHRDISKLMLQILDEGNLTDSQGHKIDFKNTIIIMTSNLGQDLLLADTELENVGGKV 674 Query: 734 YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 793 K V+ V+ N+ PEFINR+D+V+VF+ L + + I I+L + RL +R E+ Sbjct: 675 SEKTKNEVIQVMKQNYPPEFINRLDDVLVFNRLSRESLRKIVDIRLSEVQDRLVDRRIEL 734 Query: 794 HISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEV 848 ++D A + L+E GYDP+YGARPL R I++Q+ NPL+ +++ GE+ +++++ Sbjct: 735 KLTDAAKEWLTEKGYDPLYGARPLNRVIKKQLLNPLSIRLIQGEITNNSTVKVDL 789 >UniRef50_Q7AJA9 Chaperone protein clpB n=4 Tax=Chlamydiales RepID=CLPB_CHLPN Length = 866 Score = 796 bits (2055), Expect = 0.0, Method: Compositional matrix adjust. Identities = 428/858 (49%), Positives = 577/858 (67%), Gaps = 6/858 (0%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +++ ++ AL A LA + ++ HL+ ALL ++ N G L T Sbjct: 1 MEKFSDAVSEALEKAFELAKSSKHTYVTENHLLLALLENTESLFYLVIKDIHGNPGLLNT 60 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTL 122 + AL+R P V D +PS L +L + A+ GD +IS + +LA S Sbjct: 61 AVKDALSREPTVVEGEVDPKPSPGLQTLLRDAKQEAKTLGDEYISGDHLLLAFWSSNKEP 120 Query: 123 ADILK-AAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVI 181 + K + ++ I ++R G ++ AE Q L+KY +LT A +GKLDPVI Sbjct: 121 FNSWKQTTKVSFKDLKNLITKIRRGNRMDSPSAESNFQGLEKYCKNLTALAREGKLDPVI 180 Query: 182 GRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALD 241 GRDEEIRRTIQVL RRTKNNP+LIGEPGVGKTAI EGLA R+I G+VPE LKG+++ LD Sbjct: 181 GRDEEIRRTIQVLSRRTKNNPMLIGEPGVGKTAIAEGLALRLIQGDVPESLKGKQLYVLD 240 Query: 242 MGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKP 301 MGAL+AGAKYRGEFEERLK VL D+ +G I+FIDE+HT+VGAG DGAMDA N+LKP Sbjct: 241 MGALIAGAKYRGEFEERLKSVLKDVESGDGEHIIFIDEVHTLVGAGATDGAMDAANLLKP 300 Query: 302 ALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHH 361 ALARG LHC+GATTL+EY++YIEKDAALERRFQ +FV EPS+ED + ILRGL+E+YE+ H Sbjct: 301 ALARGTLHCIGATTLNEYQKYIEKDAALERRFQPIFVTEPSLEDAVFILRGLREKYEIFH 360 Query: 362 HVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQ 421 V+IT+ A+ AA LS+RYI DR LPDKAIDLIDEAAS IRMQI S P +D +R + Sbjct: 361 GVRITEGALNAAVLLSYRYIPDRFLPDKAIDLIDEAASLIRMQIGSLPLPIDEKERELAA 420 Query: 422 LKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQ 481 L ++Q+A+ +E + ++ D + + + + + L W EK +SG + K LE Sbjct: 421 LIVKQEAIKREQSPSYQEEADAMQKSIDALREELASLRLGWDEEKKLISGLKEKKNSLES 480 Query: 482 AKIAIEQARRVGDLARMSELQYGKIPELEKQL-EAATQLEGKTMRLLRNKVTDAEIAEVL 540 K + E+A RV D R++EL+Y IP+LE+++ + L + RLL+ +V + IA+V+ Sbjct: 481 MKFSEEEAERVADYNRVAELRYSLIPQLEEEIKQDEASLNQRDNRLLQEEVDERLIAQVV 540 Query: 541 ARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGS 600 A WTGIPV +M+E E EKLL +E+ L RV+GQ AV AVS++IR +R GL DP RP+G Sbjct: 541 ANWTGIPVQKMLEGEAEKLLILEESLEERVVGQPFAVSAVSDSIRAARVGLNDPQRPLGV 600 Query: 601 FLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG 660 FLFLGPTGVGKTEL KALA+ +F+ +EAMVR DMSE+MEKHS+S+L+G+ PGYVGYEEGG Sbjct: 601 FLFLGPTGVGKTELAKALADLLFNKEEAMVRFDMSEYMEKHSISKLIGSSPGYVGYEEGG 660 Query: 661 YLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL 720 L+EA+RRRPYSV+L DE+EKA +V NILLQV DDG LTDG+ R V+ +N + IMTSN+ Sbjct: 661 SLSEALRRRPYSVVLFDEIEKADKEVLNILLQVFDDGILTDGKKRKVNCKNALFIMTSNI 720 Query: 721 GSDLIQERFGELDYAHMKELVLGVVSHNFR----PEFINRIDEVVVFHPLGEQHIASIAQ 776 GS + + + KE +L VVS + PEF+NRIDE++ F PL ++ I I Sbjct: 721 GSPELADYCSKKGSELTKEAILSVVSPVLKRYLSPEFMNRIDEILPFVPLTKEDIVKIVG 780 Query: 777 IQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSG 836 IQ++R+ +RL+ R + D + LSE GYD +GARPLKR IQQ++ L++ +L G Sbjct: 781 IQMRRIAQRLKARRINLSWDDSVILFLSEQGYDSAFGARPLKRLIQQKVVILLSKALLKG 840 Query: 837 ELVPGKVIRLEVNEDRIV 854 ++ P I L + ++ +V Sbjct: 841 DIKPDTSIELTMAKEVLV 858 >UniRef50_Q822Q4 Chaperone protein clpB n=11 Tax=cellular organisms RepID=CLPB_CHLCV Length = 864 Score = 783 bits (2022), Expect = 0.0, Method: Compositional matrix adjust. Identities = 418/855 (48%), Positives = 577/855 (67%), Gaps = 6/855 (0%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +D++++ AL A LA N ++ H + LL ++ N L + Sbjct: 1 MDKISDAVSEALEKAFELAQSAKNPYVSENHFLKCLLENTESLFYLIIKDIHNNPKLLTS 60 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES-RGT 121 +++AL+ P V +PS L +L + A+ GD ++S + +LA +S + Sbjct: 61 AVDEALSLEPSVIEGSAMPKPSPGLQSLLLDAKQEAKDLGDEYLSGDHVLLAFWKSNKEP 120 Query: 122 LADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVI 181 A K + ++ + I +R G ++ AE+ + L+KY +LT A++GKLDPVI Sbjct: 121 FASWKKTVKISLDDLKKLIINIRRGNRMDSPSAENNLRGLEKYCKNLTLLAKEGKLDPVI 180 Query: 182 GRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALD 241 GRDEEIRRT+QVL RRTKNNP+LIGEPGVGKTAI EGLA RI+ G++PE LKG+++ LD Sbjct: 181 GRDEEIRRTVQVLSRRTKNNPMLIGEPGVGKTAIAEGLALRIVQGDIPESLKGKQLYVLD 240 Query: 242 MGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKP 301 MGAL+AGAKYRGEFEERLK VL D+ +G ILFIDE+HT+VGAG DGAMDA N+LKP Sbjct: 241 MGALIAGAKYRGEFEERLKSVLKDVESVDGESILFIDEVHTLVGAGATDGAMDAANLLKP 300 Query: 302 ALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHH 361 ALARG LHC+GATTL+EY++YIEKDAALERRFQ +FV EPS+ED + ILRGL+E+YE+ H Sbjct: 301 ALARGTLHCIGATTLNEYQKYIEKDAALERRFQPIFVTEPSLEDAVFILRGLREKYEIFH 360 Query: 362 HVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQ 421 V+IT+ A+ AA LS+RYI DR LPDKAIDLIDEAAS IRMQI S P +D +R + Sbjct: 361 GVRITEGALNAAVLLSYRYIPDRFLPDKAIDLIDEAASLIRMQIGSLPLPIDEKERELAA 420 Query: 422 LKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQ 481 L ++Q+A+ +E + ++ + + + + + + L W EK ++G + K LE Sbjct: 421 LIVKQEAIKREKAPSYQEEAAAMQQSIEQLKEELAALRLRWDEEKKLITGLKEKKNSLEN 480 Query: 482 AKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQ-LEGKTMRLLRNKVTDAEIAEVL 540 K + E+A RV D R++EL+Y IP LE+++ + L + RLL+ +V + IA+V+ Sbjct: 481 MKFSEEEAERVADYNRVAELRYSLIPALEEEIREDEEALNQRDNRLLQEEVDERLIAQVV 540 Query: 541 ARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGS 600 A WTGIP+ +M+E E EKLL +E+ L RV+GQ A+ AVS++IR +R GL+DP RP+G Sbjct: 541 ANWTGIPIQKMLEGEAEKLLVLEESLEERVVGQPFAISAVSDSIRAARVGLSDPQRPLGV 600 Query: 601 FLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG 660 FLFLGPTGVGKTEL KALA+ +F+ +EAMVR DM+E+MEKHSVS+L+G+PPGYVGYEEGG Sbjct: 601 FLFLGPTGVGKTELAKALADLLFNKEEAMVRFDMTEYMEKHSVSKLIGSPPGYVGYEEGG 660 Query: 661 YLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL 720 L+EA+RRRPYSV+L DE+EKA +VFNILLQ+ D+G LTD + R V+ +N + IMTSN+ Sbjct: 661 SLSEALRRRPYSVVLFDEIEKADKEVFNILLQIFDEGILTDSKKRKVNCKNALFIMTSNI 720 Query: 721 GSDLIQERFGELDYAHMKELVLGVVSHN----FRPEFINRIDEVVVFHPLGEQHIASIAQ 776 GS + + + KE VL VV+ F PEFINRID+++ F PL + I I Sbjct: 721 GSQELADYCAKKGSRVSKETVLSVVAPTLKKYFSPEFINRIDDILPFVPLNTEDIVKIVG 780 Query: 777 IQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSG 836 IQ++R+ +RL ER + D + LSE GYD +GARPLKR IQQ++ L++ +L G Sbjct: 781 IQMRRVAQRLLERRVTLTWDDSVILYLSEQGYDSSFGARPLKRLIQQKVVTLLSKALLKG 840 Query: 837 ELVPGKVIRLEVNED 851 ++ I L +++D Sbjct: 841 DIKSDTSIELTMSKD 855 >UniRef50_Q8IB03 ClpB protein, putative n=13 Tax=cellular organisms RepID=Q8IB03_PLAF7 Length = 1070 Score = 776 bits (2005), Expect = 0.0, Method: Compositional matrix adjust. Identities = 407/920 (44%), Positives = 606/920 (65%), Gaps = 78/920 (8%) Query: 4 DRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQE-GGSVSPLLTSAGINAGQLRT 62 D T K A++ + +D+ ++E L+ ALLN G +L +GI+ L Sbjct: 154 DDYTEKAWEAISSLNKIGEKYDSAYVEAEMLLLALLNDSPDGLAERILKESGIDTQLLVQ 213 Query: 63 DINQALNRLPQV-EGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL--ESR 119 +I+ L + P++ G G + L VL+ +L ++ D +IS E +L+ + +S+ Sbjct: 214 EIDDYLKKQPKMPSGFGEQKILGRTLQTVLSTSKRLKKEFNDEYISIEHLLLSIISEDSK 273 Query: 120 GTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDP 179 T +LK + +A+E++RG + V + E QAL+KY+ DLT A GKLDP Sbjct: 274 FTRPWLLKY-NVNYEKVKKAVEKIRGKKKVTSKTPEMTYQALEKYSRDLTALARAGKLDP 332 Query: 180 VIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLA 239 VIGRD EIRR IQ+L RRTKNNP+L+G+PGVGKTAIVEGLA +I+ G+VP+ LKGR++++ Sbjct: 333 VIGRDNEIRRAIQILSRRTKNNPILLGDPGVGKTAIVEGLAIKIVQGDVPDSLKGRKLVS 392 Query: 240 LDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGK-ADGAMDAGNM 298 LDM +L+AGAKYRG+FEERLK +L ++ EG V++FIDE+HT+VGAG A+GA+DAGN+ Sbjct: 393 LDMSSLIAGAKYRGDFEERLKSILKEVQDAEGQVVMFIDEIHTVVGAGAVAEGALDAGNI 452 Query: 299 LKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYE 358 LKP LARGEL C+GATT+ EYRQ+IEKD ALERRFQ++ V +PSV++TI+ILRGLKERYE Sbjct: 453 LKPMLARGELRCIGATTVSEYRQFIEKDKALERRFQQILVEQPSVDETISILRGLKERYE 512 Query: 359 LHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418 +HH V+I D A+V AA LS RYI+ R LPDKAIDLIDEAAS++++Q+ SKP +L+ ++++ Sbjct: 513 VHHGVRILDSALVQAAVLSDRYISYRFLPDKAIDLIDEAASNLKIQLSSKPIQLENIEKQ 572 Query: 419 IIQLKLEQQALM------------------------------------------------ 430 +IQL++E+ +++ Sbjct: 573 LIQLEMEKISILGDKQKNLFNYSSVANTHNNNNNSSISSNNSSSYGNAEETEATVDYTKS 632 Query: 431 -----KESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIA 485 K +E RL M++ +S+ ++ ++ + W EK+ + + IK ++ KI Sbjct: 633 PNFLKKRINEKEIDRLKMIDRIMSELRKEQRKILDSWSTEKSYVDNIRAIKERIDVVKIE 692 Query: 486 IEQARRVGDLARMSELQYGKIPELEKQLEAATQ-----LEGKTMRLLRNKVTDAEIAEVL 540 IE+A R DL R +EL++ +P+LEKQL+ A + + K+ R+L+++VT +I ++ Sbjct: 693 IEKAERYFDLNRAAELRFETLPDLEKQLKKAEENYLNDIPEKS-RILKDEVTSEDIVNIV 751 Query: 541 ARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGS 600 + TGI ++++++SE+EK+L +E ELH ++IGQ++AV V+ A++RSR G+ +P RPI S Sbjct: 752 SMSTGIRLNKLLKSEKEKILNLENELHKQIIGQDDAVKVVTKAVQRSRVGMNNPKRPIAS 811 Query: 601 FLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG 660 +FLGPTGVGKTEL K LA+ +FD+ EA++ DMSE+MEKHS+S+L+GA PGYVGYE+GG Sbjct: 812 LMFLGPTGVGKTELSKVLADVLFDTPEAVIHFDMSEYMEKHSISKLIGAAPGYVGYEQGG 871 Query: 661 YLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL 720 LT+AVR++PYS+IL DE+EKAHPDV+N+LL+V+D+G+L+D +G +FRNT++I TSNL Sbjct: 872 LLTDAVRKKPYSIILFDEIEKAHPDVYNLLLRVIDEGKLSDTKGNVANFRNTIIIFTSNL 931 Query: 721 GSDLIQERFGELDYAH-------MKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIAS 773 GS I LD A+ +KE V+ V FRPEF NRID+ V+F L ++ + Sbjct: 932 GSQSI------LDLANDPNKKEKIKEQVMKSVRETFRPEFYNRIDDHVIFDSLSKKELKE 985 Query: 774 IAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQI 833 IA I+++++ RL ++ ++I I D + + YDP +GARPLKR IQ +IE +A +I Sbjct: 986 IANIEIRKVANRLFDKNFKITIDDAVFSYIVDKAYDPSFGARPLKRVIQSEIETEIAVRI 1045 Query: 834 LSGELVPGKVIRLEVNEDRI 853 L V I + + + ++ Sbjct: 1046 LDETFVENDTINISLKDQKL 1065 >UniRef50_D2VCN5 Heat shock protein 101 n=1 Tax=Naegleria gruberi RepID=D2VCN5_NAEGR Length = 891 Score = 767 bits (1980), Expect = 0.0, Method: Compositional matrix adjust. Identities = 401/872 (45%), Positives = 590/872 (67%), Gaps = 28/872 (3%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M D+ T+K ++DA +A + FI PLH+ + + N + L +++ Q Sbjct: 1 MNPDKFTDKTNQTISDAYMMAKDRKHIFISPLHVAAVIFNPDDKQSLGFLVCKKVSSSQK 60 Query: 61 RTDINQALNRLPQVEGTGGDVQ--------PSQDLVRVLNLCDKLAQKRGDNFISSELFV 112 D N+ + L T VQ P++ LV VL +K+ + D+ ++ + + Sbjct: 61 TIDCNKIADELKNAMNTKISVQDPPVEDLAPNRRLVSVLQAAEKIKDQLDDHLLAVDHVL 120 Query: 113 LAALESRGTLADILKAAGA--TTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTE 170 LA ++ ILKA T + + +RGG+ V+ + AE AL +Y +++ + Sbjct: 121 LALMDDSDVSNAILKATNNQLTKQVLKDTLALIRGGKKVDSKQAETGYDALNRYGVNMVD 180 Query: 171 RAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPE 230 A QGK DP+IGRD+E+ R I+VL RRTKNN L+ EPGVGK+A+VEGLA RI G+VP+ Sbjct: 181 MARQGKYDPLIGRDKELARMIRVLSRRTKNNCCLLAEPGVGKSALVEGLAMRIATGDVPK 240 Query: 231 GLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKA- 289 L+ + + +LD+G++VAG+K+RGEFEERLK +L ++ ++ G+VILFIDE+HT+ GAG Sbjct: 241 NLQTQ-LYSLDLGSMVAGSKFRGEFEERLKSILKEV-EESGDVILFIDEIHTLSGAGSTG 298 Query: 290 DGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAI 349 D ++DA NM+KP LARG L +GATT EYR+YIEKDAALERRFQ V++AEP+V++TI+I Sbjct: 299 DNSLDASNMIKPLLARGVLRLIGATTPTEYRKYIEKDAALERRFQPVYLAEPNVQETISI 358 Query: 350 LRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKP 409 LRGLK RYE HH V+I D AIV AA LS RYI R PDK+IDLIDEA+++IR+Q++S+P Sbjct: 359 LRGLKSRYEAHHGVRILDSAIVEAARLSARYIQGRYNPDKSIDLIDEASANIRVQLNSRP 418 Query: 410 EELDRLDRRIIQLKLEQQALMKE---SDEASKKRLDMLNEELSDKERQYSELEEEWKAEK 466 E +D L+R+ +QL++E AL KE SDE +K+RL+ + E+S + + ++ +++AE Sbjct: 419 EIIDTLERKKLQLQVEATALEKEKNYSDEKTKQRLEQVKNEISKVDEELKPIKLKYEAET 478 Query: 467 ASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEA-ATQLEGK--- 522 + ++ + +LE+ K + A DLA S+L+YG IPE+E+ +++ ++E K Sbjct: 479 SLVNELREKNQKLEKLKAKMVDAEARYDLALASDLKYGAIPEIEESIQSLKKKIEQKEED 538 Query: 523 -------TMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNE 575 + + + VT +I EV+ARWTGIPV R+ ESE++K+L++E+ L RV+GQ + Sbjct: 539 DRKNGVNSANMTSDVVTPEQINEVIARWTGIPVQRLNESEKDKVLKLEERLMKRVVGQED 598 Query: 576 AVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMS 635 A+ ++S +I RS+AGL++PN+PIGSFLFLG +GVGKT L K++A +FD ++ MVRIDMS Sbjct: 599 AIKSLSESIIRSKAGLSNPNKPIGSFLFLGSSGVGKTYLAKSIAYELFDDEKHMVRIDMS 658 Query: 636 EFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLD 695 E ME+HSVSRL+G+P GYVGY + LTE VRR+PY+V+L DE+EKAHP V N+LLQ+LD Sbjct: 659 ELMEQHSVSRLIGSPAGYVGYSDDNQLTEPVRRQPYTVVLFDEIEKAHPRVLNVLLQLLD 718 Query: 696 DGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFIN 755 DGRLTDGQGRTVDF+NTV+IMTSN+GS + + +K+ V+ V +F PEF+N Sbjct: 719 DGRLTDGQGRTVDFKNTVIIMTSNIGSKHFLT-MNDNNKETVKKQVMNEVRQHFTPEFLN 777 Query: 756 RIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGAR 815 R+D+++ F PL +H+ ++ ++Q++ L +RL+ER I I D A +L+ G+DP YGAR Sbjct: 778 RLDDILFFEPLTSKHLVNVVRLQMESLTERLKERDISIDIRDSACELVISEGFDPNYGAR 837 Query: 816 PLKRAIQQQIENPLAQQILSGELVPGKVIRLE 847 PL R IQ+ I L++ +L GEL G I ++ Sbjct: 838 PLARFIQKHIVTELSKLMLKGELRDGSQIVIQ 869 >UniRef50_P33416 Heat shock protein 78, mitochondrial n=49 Tax=Dikarya RepID=HSP78_YEAST Length = 811 Score = 763 bits (1970), Expect = 0.0, Method: Compositional matrix adjust. Identities = 378/728 (51%), Positives = 530/728 (72%), Gaps = 14/728 (1%) Query: 135 NITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVL 194 N + QMR D + ++ AL+++ +LT+ A GKLDPVIGRDEEI R IQ+L Sbjct: 77 NFKRTYVQMRM-----DPNQQPEKPALEQFGTNLTKLARDGKLDPVIGRDEEIARAIQIL 131 Query: 195 QRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGE 254 RRTKNNP LIG GVGKTA+++GLAQRI+ GEVP+ LK + ++ALD+G+L+AGAKYRGE Sbjct: 132 SRRTKNNPCLIGRAGVGKTALIDGLAQRIVAGEVPDSLKDKDLVALDLGSLIAGAKYRGE 191 Query: 255 FEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGAT 314 FEERLK VL ++ K G VI+FIDE+H ++G GK DG+MDA N+LKP LARG L C+ AT Sbjct: 192 FEERLKKVLEEIDKANGKVIVFIDEVHMLLGLGKTDGSMDASNILKPKLARG-LRCISAT 250 Query: 315 TLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAA 374 TLDE++ IEKD AL RRFQ + + EPSV DTI+ILRGLKERYE+HH V+ITD A+V+AA Sbjct: 251 TLDEFK-IIEKDPALSRRFQPILLNEPSVSDTISILRGLKERYEVHHGVRITDTALVSAA 309 Query: 375 TLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESD 434 LS+RYI DR LPDKAIDL+DEA + +R+Q +SKP+E+ +LDR I+++++E ++L KE+D Sbjct: 310 VLSNRYITDRFLPDKAIDLVDEACAVLRLQHESKPDEIQKLDRAIMKIQIELESLKKETD 369 Query: 435 EASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGD 494 S +R + L ++L K + + L + W AE+A + + KA LEQA+I +E+ +R GD Sbjct: 370 PVSVERREALEKDLEMKNDELNRLTKIWDAERAEIESIKNAKANLEQARIELEKCQREGD 429 Query: 495 LARMSELQYGKIPELEKQLEAATQL-EGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 553 + SEL+Y +IP+LEK++ + + +G + LL + VT +I++V+A+ TGIP +M+ Sbjct: 430 YTKASELRYSRIPDLEKKVALSEKSKDGDKVNLLHDSVTSDDISKVVAKMTGIPTETVMK 489 Query: 554 SEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613 ++++LL ME L RV+GQ+EA+ A+S+A+R RAGL RPI SF+FLGPTG GKTE Sbjct: 490 GDKDRLLYMENSLKERVVGQDEAIAAISDAVRLQRAGLTSEKRPIASFMFLGPTGTGKTE 549 Query: 614 LCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673 L KALA F+FD + ++R DMSEF EKH+VSRL+GAPPGYV E GG LTEAVRR+PY+V Sbjct: 550 LTKALAEFLFDDESNVIRFDMSEFQEKHTVSRLIGAPPGYVLSESGGQLTEAVRRKPYAV 609 Query: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERF---- 729 +L DE EKAHPDV +LLQVLD+G+LTD G VDFRNT+++MTSN+G D++ Sbjct: 610 VLFDEFEKAHPDVSKLLLQVLDEGKLTDSLGHHVDFRNTIIVMTSNIGQDILLNDTKLGD 669 Query: 730 -GELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEE 788 G++D A K V+ + ++ PEFINRID+++VF+ L ++ + SI I++ + RL E Sbjct: 670 DGKIDTA-TKNKVIEAMKRSYPPEFINRIDDILVFNRLSKKVLRSIVDIRIAEIQDRLAE 728 Query: 789 RGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEV 848 + +I ++DEA L++ GYD +YGARPL R I +QI N +A +L G++ G+ +R+ V Sbjct: 729 KRMKIDLTDEAKDWLTDKGYDQLYGARPLNRLIHRQILNSMATFLLKGQIRNGETVRVVV 788 Query: 849 NEDRIVAV 856 + ++V + Sbjct: 789 KDTKLVVL 796 >UniRef50_C3XDZ0 ATP-dependent protease ATP-binding subunit n=2 Tax=Campylobacterales RepID=C3XDZ0_9HELI Length = 898 Score = 761 bits (1966), Expect = 0.0, Method: Compositional matrix adjust. Identities = 402/893 (45%), Positives = 583/893 (65%), Gaps = 47/893 (5%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 D+LTN+ + L +A A+ H N +P+H + A+L + L N L Sbjct: 4 FDKLTNQMREILNNAAQFAITHKNNETQPIHTLLAMLADSNMLLYQALQKNNENINALIQ 63 Query: 63 DINQALNRLPQVEGTGG-DVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGT 121 ++ +++LP+V ++ S+ L L A +GD+FI FV A L+S Sbjct: 64 NLTLEIDKLPKVSNANTQNMSLSKSLQEALQNALSFATTQGDSFIGVGSFVRANLDSH-- 121 Query: 122 LADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVI 181 D+LK + ++ MR G ++ Q ++D + L KY I+L++ A Q KL+PVI Sbjct: 122 FKDLLK--NIDKLELINTLKNMRKGMKIDSQSSDDTLETLDKYGINLSKLAAQNKLNPVI 179 Query: 182 GRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALD 241 GR+EEI R +Q+L R+TKNNP+L+GEPGVGKTA+VEGLA +I EVP L+ ++V+ALD Sbjct: 180 GRNEEIERMMQILIRKTKNNPILLGEPGVGKTAVVEGLAIKIAKKEVPLSLQNKQVIALD 239 Query: 242 MGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKP 301 M AL+AGAKYRG+FEERLK V++++ K +ILFIDE+HT+VGAG ++G MDA N+LKP Sbjct: 240 MTALMAGAKYRGDFEERLKAVVDEV-KNNDEIILFIDEIHTIVGAGASEGGMDAANILKP 298 Query: 302 ALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHH 361 ALARGEL +GATTL EYR+Y EKDAAL RRFQ V + EPS + + I+RG+KE E HH Sbjct: 299 ALARGELRTIGATTLKEYRKYFEKDAALARRFQPVNINEPSQNEALQIMRGIKESLEAHH 358 Query: 362 HVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQ 421 +V ITD A+V + LS RYI +R LPDKAIDLIDEAA+ ++MQI+S+P+ + + R I Sbjct: 359 NVSITDGALVESVKLSSRYITNRYLPDKAIDLIDEAAAELKMQIESEPKAIAKAKRDIEA 418 Query: 422 LKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQ 481 L++E+ AL + +E RL + +EL D + + S L+ ++ EKA S +K ++E Sbjct: 419 LEVEKVALNLDKNEQHNTRLQEIEKELIDSKEKLSGLQSAFENEKAIFSDIAKVKNDIES 478 Query: 482 AKIAIEQARRVGDLARMSELQYGKIPELE---KQLEAATQLEGKTMRLLRNKVTDAEIAE 538 + E ARR GD AR E+++GKIP + K LEA Q K+ LL++ VT IAE Sbjct: 479 LRRESEIARRSGDYARAGEIEHGKIPNAQAELKNLEAKWQDLQKSGSLLKHAVTKESIAE 538 Query: 539 VLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPI 598 +++RWT IPV +M+ESE+ ++L +E+ L VIGQN+A+++++ AI+R++AGL D NRPI Sbjct: 539 IVSRWTQIPVGKMLESEKHRILHIEENLKASVIGQNKAIESIARAIKRNKAGLNDANRPI 598 Query: 599 GSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEE 658 SFLFLG +GVGKT+ KALA F+FDS++ +VR+DMSE+M++ ++L GA PGYVGYEE Sbjct: 599 ASFLFLGSSGVGKTQSAKALAKFLFDSEKELVRLDMSEYMQEIDATKLTGAAPGYVGYEE 658 Query: 659 GGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTS 718 GG LTEA++R+PYSV+L DEVEKAHP VFN+LLQVLDDGRL+D +G VDF+NT++I+TS Sbjct: 659 GGILTEAIKRKPYSVVLFDEVEKAHPKVFNVLLQVLDDGRLSDNKGVVVDFKNTIIILTS 718 Query: 719 NLGSDLIQERFGEL-----DYAHM------------------KELVLGVVSHN------- 748 N+GS+ I E E+ D A + KE++ +V Sbjct: 719 NIGSEFICEDSKEVAMKRDDIAALQKAIKEGNIESREKLEREKEILNSLVEAQRASQMEK 778 Query: 749 --------FRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEAL 800 FRPEF+NR+D+ ++F+ L I +I I +++ +L++R + ++D Sbjct: 779 IEQELKKFFRPEFLNRLDDKIIFNALSRDDIRNIIDILTQQVALKLKDRNITLVLTDSMK 838 Query: 801 KLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRI 853 L+++G+DPV+GARPLKRA+Q++IE+ LA IL+ EL + ++ E+ + Sbjct: 839 DYLADSGFDPVFGARPLKRAVQREIEDRLADLILNEELSEQSKVIFDIVENSV 891 >UniRef50_B7FUC8 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FUC8_PHATR Length = 768 Score = 751 bits (1938), Expect = 0.0, Method: Compositional matrix adjust. Identities = 379/695 (54%), Positives = 515/695 (74%), Gaps = 8/695 (1%) Query: 159 QALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEG 218 Q L+++T+DLT +A KLDP+IGR EEIRR +Q+L RRTKNNPVLIGE GVGKTAI EG Sbjct: 11 QYLEQFTVDLTNQAADNKLDPIIGRHEEIRRCLQILARRTKNNPVLIGEAGVGKTAIAEG 70 Query: 219 LAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFID 278 LAQRI +GEVPE +K +RVL+LD+ AL AGA RG+FEERLKGV+ D+ + EG VILFID Sbjct: 71 LAQRIHSGEVPESMKDKRVLSLDIAALTAGAMMRGQFEERLKGVVKDVEQAEGKVILFID 130 Query: 279 ELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFV 338 E+HT+VGAGKA+G MD NMLKPALARG+L VGATTL+E+R +EKDAAL RRFQ V+V Sbjct: 131 EIHTIVGAGKAEGGMDMSNMLKPALARGDLQLVGATTLNEFR-ILEKDAALARRFQSVYV 189 Query: 339 AEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAA 398 AEPSVED+++ILRGLK YELHH ++I D A+VAAATLS RYIADR+ PDK+IDL+DEA Sbjct: 190 AEPSVEDSLSILRGLKTAYELHHGIRIKDEALVAAATLSDRYIADRKQPDKSIDLVDEAC 249 Query: 399 SSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKE--SDEASKKRLDMLNEELSDKERQYS 456 S +R++ +SKPE + +++R ++ ++E+ AL E SD+ R + E+S+ + + Sbjct: 250 SRLRLEQESKPEIIWKVERDLLTRQIERSALENEDDSDDKVATRRKQVEREVSELKTEVG 309 Query: 457 ELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEA- 515 L E W AEK L+ QT+K +LE+A+ +E ARR GD A+ EL + IP LE + EA Sbjct: 310 RLTELWMAEKNELNRVQTVKGDLEKARADMEAARRQGDYAKAGELMHATIPNLEHEFEAL 369 Query: 516 -ATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574 +T E K ++L + VT IA ++AR TGIPVSR+ +E +KLL +E +L RV+GQ+ Sbjct: 370 ESTVDEHKKTKMLADSVTAEAIATIIARHTGIPVSRIAGNESQKLLHIEDKLRERVVGQD 429 Query: 575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 634 A++AV + +R +R L +R +G+FLFLGPTGVGKTE KALA+F+FD +AM RIDM Sbjct: 430 HALEAVGDCVRLARTRLQAQDRTLGNFLFLGPTGVGKTETAKALAHFLFDDQDAMTRIDM 489 Query: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694 SE+ EKH+VSRL+GAPPGYVGYEEGG LTE+VRRRPY V+LLDE EK H +V+N+LLQ+ Sbjct: 490 SEYGEKHTVSRLIGAPPGYVGYEEGGVLTESVRRRPYQVLLLDEFEKGHREVWNLLLQLF 549 Query: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYA--HMKELVLGVVSHNFRPE 752 D+G LTD GR VDFRN +VIMTSNLG+ +I E +L + H+ + ++ VV + PE Sbjct: 550 DEGHLTDSHGRKVDFRNVIVIMTSNLGAQIIAELPAQLKGSEPHVHDTIMEVVRQSLSPE 609 Query: 753 FINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEE-RGYEIHISDEALKLLSENGYDPV 811 +NRID+ +VF+ L +++ +IA++ +K + KRLE+ + + +S A +++E GYD Sbjct: 610 LLNRIDDTIVFNRLQRENMDTIAEMGIKEIEKRLEDGQNMSLDVSSTATAVIAEMGYDVR 669 Query: 812 YGARPLKRAIQQQIENPLAQQILSGELVPGKVIRL 846 YGARPLKR + + + NPL++ +L G ++ G +++ Sbjct: 670 YGARPLKRTLAKTLLNPLSRLVLEGAVMEGDTVKV 704 >UniRef50_P31540 Heat shock protein hsp98 n=59 Tax=Dikarya RepID=HSP98_NEUCR Length = 927 Score = 749 bits (1934), Expect = 0.0, Method: Compositional matrix adjust. Identities = 416/887 (46%), Positives = 599/887 (67%), Gaps = 39/887 (4%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALL-----------NQEGGSVSPL----L 50 T++ + AL DA +LA + + + P+HL ALL N G+ S L + Sbjct: 7 FTDRAKKALEDAMALAEQYAHSQLLPVHLAVALLDPLPDPSKDQQNAPAGATSSLFRQVI 66 Query: 51 TSAGINAGQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSEL 110 A + + +AL RLP + V + VL ++L + + D +I+ + Sbjct: 67 ERAHGDPQLFDRALKKALVRLPSQDPPPDHVSMAPSFHTVLRKANELQKTQKDTYIAVD- 125 Query: 111 FVLAALESRGTLADILKAAGATTAN-ITQAIEQMRGGESVNDQGA--EDQRQALKKYTID 167 ++ AL ++ + LK A +T AI+ +RG + V+ + A E++ + L K+TID Sbjct: 126 HLITALAEEPSIMNALKEANIPKPKLVTDAIQAIRGTKRVDSRNADTEEEHENLAKFTID 185 Query: 168 LTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGE 227 +T A +GK+DPVIGR+EEIRR I++L RRTKNNPVLIGEPGVGKT +VEGLAQRI+N + Sbjct: 186 MTAMAREGKIDPVIGREEEIRRVIRILSRRTKNNPVLIGEPGVGKTTVVEGLAQRIVNAD 245 Query: 228 VPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAG 287 VP+ L ++L+LD+GALVAG+KYRGEFEER+KGVL ++++ + +ILFIDE+H ++GAG Sbjct: 246 VPDNLANCKLLSLDVGALVAGSKYRGEFEERMKGVLKEISESKEMIILFIDEIHLLMGAG 305 Query: 288 KA-DGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDT 346 + +G MDA N+LKP LARG+LHC+GATTL EYR+YIEKDAA ERRFQ+V V EPSV +T Sbjct: 306 ASGEGGMDAANLLKPMLARGQLHCIGATTLAEYRKYIEKDAAFERRFQQVIVKEPSVSET 365 Query: 347 IAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQID 406 I+ILRGLKE+YE+HH V I+D AIVAAA L+ RY+ R+LPD AIDLIDEAA+++R+ + Sbjct: 366 ISILRGLKEKYEVHHGVTISDAAIVAAANLAARYLTSRRLPDSAIDLIDEAAAAVRVARE 425 Query: 407 SKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEK 466 S+PE +D L+R++ QLK+E AL +E DEASK RL+ ++ + E + L E+++ EK Sbjct: 426 SQPEIIDSLERKLRQLKIEIHALSREKDEASKARLEQAKKDAENVEEELRPLREKYEQEK 485 Query: 467 ASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELE---KQLEAATQLEGKT 523 Q + +LE + E+A R+GD +R ++LQY IPE E K+LE Sbjct: 486 QRAKALQEARMKLESLRQKAEEASRMGDHSRAADLQYYAIPEQEAVIKRLEKEKAAADAA 545 Query: 524 MR---------LLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574 + ++ + V +I E++ARWTGIPV+R+ SE+EKLL ME+ L V+GQ Sbjct: 546 LNAAAAETGGAMITDVVGPDQINEIVARWTGIPVTRLKTSEKEKLLHMEKHLSKIVVGQK 605 Query: 575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 634 EAV +VSNAIR R+GL++PN+P SFLF GP+G GKT L KALA F+FD +AM+R DM Sbjct: 606 EAVQSVSNAIRLQRSGLSNPNQP-PSFLFCGPSGTGKTLLTKALAEFLFDDPKAMIRFDM 664 Query: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694 SE+ E+HS+SR++GAPPGYVG++ GG LTEA+RR+P+S++L DEVEKA +V +LLQ++ Sbjct: 665 SEYQERHSLSRMIGAPPGYVGHDSGGQLTEALRRKPFSILLFDEVEKAAKEVLTVLLQLM 724 Query: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE---RFGELDYAHMKELVLGVVSHNFRP 751 DDGR+TDGQGR VD RN +V+MTSNLG++ + + G++D +ELV+ + + F P Sbjct: 725 DDGRITDGQGRVVDARNCIVVMTSNLGAEYLSRPNAKDGKID-PTTRELVMNALRNYFLP 783 Query: 752 EFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLE--ERGYEIHISDEALKLLSENGYD 809 EF+NRI +V+F+ L + I I ++++ + KRL+ +R +I +S+EA L GY Sbjct: 784 EFLNRISSIVIFNRLTRREIRKIVELRIAEIQKRLQDNDRNVKIEVSEEAKDKLGALGYS 843 Query: 810 PVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAV 856 P YGARPL+R +++++ N LA IL G + G+V R+ V + +I + Sbjct: 844 PAYGARPLQRVLEKEVLNRLAVLILRGSIRDGEVARVVVQDGKITVL 890 >UniRef50_B0EI70 Heat shock protein, putative n=1 Tax=Entamoeba dispar SAW760 RepID=B0EI70_ENTDI Length = 840 Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust. Identities = 392/862 (45%), Positives = 570/862 (66%), Gaps = 38/862 (4%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M ++ T+ ++Q +A N +I P+H+M A++ +E V ++ G + +L Sbjct: 1 MDPNKWTDATVQMFKESQEIAFERKNAYIMPIHMMEAIVEEESNIVIRIVEMMGGDVNKL 60 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG 120 + +I + +N++P D+ +VL + + GD++++ ++ V++ +E + Sbjct: 61 KKEIKETMNKVPVQNPPPVDIGLHPTTQQVLRRAIEKQKIMGDSYLAIDVIVMSLMEEK- 119 Query: 121 TLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPV 180 ++ I+ +G + I +MR G+SV + AE Q +ALKKY DLT +AE GK+DP+ Sbjct: 120 EISTIVGNSGINVKEFNKKITEMRKGQSVETKEAESQYEALKKYGNDLTAQAESGKMDPI 179 Query: 181 IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL 240 IGRDEEI+R I++L RRTKNNPVLIGEPGVGKTA+VEGLAQRI+ G+VP L+ R V+ L Sbjct: 180 IGRDEEIKRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPSNLQCR-VIGL 238 Query: 241 DMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAG-KADGAMDAGNML 299 DMGAL+AGA+YRG+FEERLK V+ ++ + + +ILFIDE+HT++GAG +GAMDA N+L Sbjct: 239 DMGALIAGAQYRGQFEERLKAVIKEVKESKIPIILFIDEIHTVLGAGATGEGAMDAANIL 298 Query: 300 KPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYEL 359 KP L+RGEL C+GATTL+EYR+Y+EKD A ERRFQ+V+V EPS EDT+ ILRG++E+YE Sbjct: 299 KPMLSRGELRCIGATTLEEYRKYVEKDPAFERRFQQVYVKEPSEEDTLYILRGIREKYEN 358 Query: 360 HHHVQITDPAIVAAATLSHRYIADRQLPDKAIDL---IDEAASSIRMQIDSKPEELDRLD 416 H+ + ITD A+V+AATLS RYI R LPDKAIDL I +SIR + +E Sbjct: 359 HYGLTITDSALVSAATLSKRYINGRFLPDKAIDLRNTIKCRENSIR----KRHKEXXXXX 414 Query: 417 RRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476 +E E + EL + +A K T+ ++ Sbjct: 415 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEKGGSE-EMKELATKIEAMKHKAESTKDLE 473 Query: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 536 + AI +A + RM EL+ + K ++ +VT +I Sbjct: 474 VAADLKYYAIPEAEK-----RMKELKE----------------QNKETTMISLQVTPTQI 512 Query: 537 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNR 596 EV++RWTGIPV++M ++E+ +L+++E+ELH RVIGQNEAV AVS+AI RSR GL + R Sbjct: 513 EEVVSRWTGIPVTKMNQTEKTRLMKLEEELHKRVIGQNEAVTAVSDAIIRSRGGLGNEKR 572 Query: 597 PIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGY 656 P GSF+FLGP+GVGKTEL KALA +FD ++ +VRIDMSE+ME HSVSRL+GAPPGYVGY Sbjct: 573 PTGSFMFLGPSGVGKTELAKALAVELFDDEQNIVRIDMSEYMESHSVSRLIGAPPGYVGY 632 Query: 657 EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 716 EEGG LTEA+RR+PYSVIL DE+EKAHP VFN+LLQ+LD+GRLTDG+GRTVDF+NT+VIM Sbjct: 633 EEGGQLTEAIRRKPYSVILFDEIEKAHPQVFNVLLQLLDEGRLTDGRGRTVDFKNTIVIM 692 Query: 717 TSNLGSDLIQ---ERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIAS 773 TSNLGS++I ER G++ +KE V+ +V F+PEF+NR+D++ VF PL E+ + Sbjct: 693 TSNLGSEIIMKGVEREGQVS-RKVKETVMEIVKKTFKPEFLNRLDDITVFSPLSEKELKE 751 Query: 774 IAQIQLKRLYKRLEERG--YEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQ 831 I ++Q+ + K +++R E+ +++ A++ + ++GY YGARP++R I++ + + + Sbjct: 752 IVKLQMGEVIKMIKKRYPLSEVEMTEAAIEGIIKSGYSIAYGARPMRRYIEKTVVTSITK 811 Query: 832 QILSGELVPGKVIRLEVNEDRI 853 I+SG + I+++ D+I Sbjct: 812 SIISGMMKEKNKIQIDYENDKI 833 >UniRef50_A8B6K3 ClpB protein n=1 Tax=Giardia lamblia ATCC 50803 RepID=A8B6K3_GIALA Length = 882 Score = 746 bits (1927), Expect = 0.0, Method: Compositional matrix adjust. Identities = 383/850 (45%), Positives = 572/850 (67%), Gaps = 23/850 (2%) Query: 5 RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDI 64 + TN Q + ++ ++ H + + H+ +AL + S + + +R I Sbjct: 6 KYTNDLQKVMTESIRVSQRHGHSLVNQYHIAAALFADDDSISSKAVQKCSGDVSAIRRAI 65 Query: 65 NQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGT-LA 123 L + P V P+ + ++N A++ D ++S+ F LA ++ T LA Sbjct: 66 ETGLKKTPSVTPVPDTPSPAGGYLGIINKMSAYAEEGRDEYLST--FHLAKAAAQDTDLA 123 Query: 124 DILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGR 183 L+ T+ + IE+M+ G S+N + AED +AL+KY +++ +AE+GK DP+I R Sbjct: 124 RCLREGRVTSNRFVEEIEKMKKGRSMNSEFAEDTCEALEKYCVEMVAKAEEGKYDPLIAR 183 Query: 184 DEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMG 243 D E+RR +++L RRTKNNPVL G GVGKTAI+EGLAQRI+ +VP+ ++ R+ ALD+G Sbjct: 184 DNELRRIVEILSRRTKNNPVLTGPAGVGKTAILEGLAQRIVRADVPQNIRNARIYALDLG 243 Query: 244 ALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPAL 303 AL+AGA+YRG+FEERLK +L++L K EGN ILFIDE+HT++GAG + G DA N+LKPAL Sbjct: 244 ALIAGAQYRGQFEERLKAILDELKKSEGNSILFIDEIHTLIGAGGSKGTSDAANLLKPAL 303 Query: 304 ARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHV 363 ARGE+ C+GATT +EYR +I D A ERRF +VFVAEP+VEDTI+ILRGL RY+ HH + Sbjct: 304 ARGEIRCIGATTTEEYRNHIASDRAFERRFAEVFVAEPNVEDTISILRGLSGRYQSHHQI 363 Query: 364 QITDPAIVAAATLSHRYI--ADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQ 421 +ITD A+VAAA L++RY+ R PD AIDL+DEA +S+R+ +DS+P +LD L+R+ ++ Sbjct: 364 RITDGALVAAAQLANRYVRAMGRHNPDAAIDLLDEAGASVRVTLDSQPAQLDALNRKKLR 423 Query: 422 LKLEQQALMKES-----DEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476 L++E++AL +ES D + KRL + +E+S+ + Q LEE++ E++S+ IK Sbjct: 424 LQIEEEALRRESEARNADSSISKRLADIIKEISNIDMQIKPLEEQYNRERSSIDKISNIK 483 Query: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPE-------LEKQLEAATQLEGKTMRLLRN 529 A + + +E G++++ ++LQYG IPE LEK+ EAA+ +L Sbjct: 484 ARITALEDKLEVYTTRGEVSKAADLQYGAIPELRDELRRLEKEQEAASYAHHDEKAMLSA 543 Query: 530 KVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA 589 VT+ E+A V+++WTGIPV+++ ++REKLL +EQ + +VIGQ AV AV ++I R+RA Sbjct: 544 VVTEMEVANVVSKWTGIPVNKLTRTDREKLLSLEQTISSKVIGQEPAVKAVCSSILRARA 603 Query: 590 GLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGA 649 GL+ P +P+GSFLFLG +GVGKT L K +A ++DS ++M+ IDMSE+ E+HSVSRL+GA Sbjct: 604 GLSRPTQPLGSFLFLGSSGVGKTYLAKTIAEELYDSVDSMIHIDMSEYTEQHSVSRLIGA 663 Query: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709 PPGYVGYE+ G LTEAV R+ Y+V+L DE+EKAHP + ILLQ+LD+GRLTDG+G VDF Sbjct: 664 PPGYVGYEQAGQLTEAVSRKRYAVVLFDEIEKAHPKILTILLQILDEGRLTDGKGNCVDF 723 Query: 710 RNTVVIMTSNLGS-DLIQERFGELDYA---HMKELVLGVVSHNFRPEFINRIDEVVVFHP 765 NTV+++TSNLGS +L+Q + + KE V+GVV PE INR+D+++VF+P Sbjct: 724 TNTVIMLTSNLGSRELLQCYHSNVSASQAKQAKEHVIGVVRSTLPPELINRLDDLIVFNP 783 Query: 766 LGEQHIASIAQIQLKRLYKRLE-ERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQ 824 L + + I + +L +RL+ E G + + D+A+ ++ D VYGARPL+R I+++ Sbjct: 784 LTKDALVKIFRSLCGQLEERLQHESGLRLRV-DDAVADIALRDSDMVYGARPLRRFIERE 842 Query: 825 IENPLAQQIL 834 I +A++++ Sbjct: 843 ITTAVARKLI 852 >UniRef50_Q83FI1 Chaperone protein clpB n=13 Tax=Bacteria RepID=CLPB_TROWT Length = 705 Score = 743 bits (1919), Expect = 0.0, Method: Compositional matrix adjust. Identities = 380/708 (53%), Positives = 523/708 (73%), Gaps = 14/708 (1%) Query: 143 MRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNP 202 M GG +++ +E L KY +LT+ A KLDPVIGRD EIRR Q+L RRTKNNP Sbjct: 1 MCGGSFMSESQSE-----LDKYGTNLTKTAATNKLDPVIGRDAEIRRVCQILSRRTKNNP 55 Query: 203 VLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGV 262 VLIG GVGKTAIVEGLAQRI+ G+VPE L+ + +++LD+ AL+AGA YRGEFE+R+K + Sbjct: 56 VLIGSAGVGKTAIVEGLAQRIVAGDVPESLRNKEIVSLDLSALLAGASYRGEFEKRVKNL 115 Query: 263 LNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQY 322 L ++ Q+ VI+FIDE+HT++ AG A+GA+ AGNMLKP LARGEL +GATTLDEYR++ Sbjct: 116 LEEI--QKSKVIIFIDEVHTLMSAGAAEGAIAAGNMLKPLLARGELRLIGATTLDEYREH 173 Query: 323 IEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIA 382 +EKD ALERRFQ+VFV EP++ED IAI+RGLKERYE HH V I+D A+V A LS RYI Sbjct: 174 LEKDPALERRFQQVFVGEPNLEDCIAIMRGLKERYEAHHKVSISDTALVTAVELSSRYIT 233 Query: 383 DRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLD 442 RQLPDKAIDL+DEAASS+RM+IDS P ELD+L R + +L+LE+ AL E+D S++RL Sbjct: 234 GRQLPDKAIDLLDEAASSLRMEIDSSPVELDQLRREVDRLRLEELALKSENDPTSEQRLR 293 Query: 443 MLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQ 502 + +LS K+ + L+ W +E+A L+ +K +++ AK + + A+R G L S L Sbjct: 294 SITNQLSGKQEMLNTLQASWNSERARLNQIGALKEQIDIAKQSADIAQREGRLEDASRLL 353 Query: 503 YGKIPELEKQLEAATQLEGK-TMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLR 561 Y IP+L+K L A +LE + + L+ ++V +IA V+ WTGIPV ++M+ + ++LL Sbjct: 354 YATIPQLQKNL--AEKLEEQDSAPLVSDQVMPEDIASVVEGWTGIPVKKLMQKDAKQLLH 411 Query: 562 MEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANF 621 +E++L VI Q A+ +++A+RRSRAGL+DPNRP G+FLFLGPTGVGKT+L KALA+ Sbjct: 412 LEEDLSKSVIAQKVAIGVIADAVRRSRAGLSDPNRPSGTFLFLGPTGVGKTQLVKALASL 471 Query: 622 MFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEK 681 ++D + +VRIDMSE+ EK S+SRL+GAPPGY+G+E G LTE+VRRRPYSV+L DE EK Sbjct: 472 LYDGE--IVRIDMSEYSEKFSISRLIGAPPGYIGHESAGQLTESVRRRPYSVVLFDEAEK 529 Query: 682 AHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELV 741 AHP+VF+ILLQVLD+GRLTD GRTVDFRNT++++TSN+GS + + E AH E V Sbjct: 530 AHPEVFDILLQVLDEGRLTDSHGRTVDFRNTIIVLTSNIGSRYLSDISLEATTAH--EYV 587 Query: 742 LGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALK 801 V FRPEF+NR+DE+V+F PL + I I + ++ L KR+++R + +S++ + Sbjct: 588 NDEVRRTFRPEFLNRLDEIVIFEPLSQSDICQIVDLNIESLNKRIKDRRIVVTVSEDLRR 647 Query: 802 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVN 849 LS++GYD +YGARPL+R IQ++IE+ LA+ I+ G + G+ +++ Sbjct: 648 WLSKSGYDVIYGARPLRRLIQREIEDRLAKLIIEGLIHDGQTASFDLS 695 >UniRef50_D1HM97 Whole genome shotgun sequence of line PN40024, scaffold_108.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1HM97_VITVI Length = 875 Score = 741 bits (1913), Expect = 0.0, Method: Compositional matrix adjust. Identities = 391/832 (46%), Positives = 539/832 (64%), Gaps = 104/832 (12%) Query: 13 ALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQALNRLP 72 A+ + +A + +Q +E HLM ALL Q+ G + + AG++ +L ++ + R P Sbjct: 93 AIVSSPEVAKENKHQIVETEHLMKALLEQKNGLARRIFSKAGVDNTRLLDATDKFIQRQP 152 Query: 73 QVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAGAT 132 +V G +DL ++ + ++ GD+F+S E VLA ++ + + K + Sbjct: 153 KVIGESAGSMLGRDLESLIQRAREYKKEYGDSFVSVEHLVLAFVQDQRFGKQLFKDFQIS 212 Query: 133 TANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQ 192 + AIE +RG + V DQ E + +AL+KY DLT A+ GKLDPVIGRD+EIRR IQ Sbjct: 213 QKALKSAIEAIRGRQQVIDQDPEGKYEALEKYGKDLTAMAKAGKLDPVIGRDDEIRRCIQ 272 Query: 193 VLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYR 252 +L RRTKNNPVLIGEPGVGKTAI EGLAQRI+ G+VP+ L R++++LDMGAL+AGAK+R Sbjct: 273 ILSRRTKNNPVLIGEPGVGKTAISEGLAQRIVQGDVPQALMNRKLISLDMGALIAGAKFR 332 Query: 253 GEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVG 312 GEFE+RLK VL ++ + +G ILFIDE+HT+VGAG +GAMDAGN+LKP L RGEL C+G Sbjct: 333 GEFEDRLKAVLKEVTESDGQTILFIDEIHTVVGAGATNGAMDAGNLLKPMLGRGELRCIG 392 Query: 313 ATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVA 372 ATTLDEYR+YIEKD ALERRFQ+V+V +P+VEDTI+ILRGL+ERYELHH V+I+D A+V Sbjct: 393 ATTLDEYRKYIEKDPALERRFQQVYVDQPTVEDTISILRGLRERYELHHGVRISDSALVE 452 Query: 373 AATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKE 432 AA LS RYI+ R LPDKAIDL+DEAA+ ++M+I SKP LD ++R +++L++E+ +L + Sbjct: 453 AAILSDRYISGRFLPDKAIDLVDEAAAKLKMEITSKPTALDEINRSVLKLEMERLSLTND 512 Query: 433 SDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRV 492 +D+ASK RL L ELS + + +EL E+W+ EK+ ++ Q+IK E+++ + I+QA R Sbjct: 513 TDKASKDRLSRLEAELSLLKEKQAELSEQWEHEKSVMTRLQSIKEEIDRVNLEIQQAERE 572 Query: 493 GDLARMSELQYGKIPELEKQLEAATQ------LEGKTMRLLRNKVTDAEIAEVLARWTGI 546 DL R +EL+YG + L++QLE A + GK+M LR +VT +IAE+++ Sbjct: 573 YDLNRAAELKYGSLNSLQRQLENAEKELDEYMKSGKSM--LREEVTGNDIAEIVS----- 625 Query: 547 PVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGP 606 L+DP+RPI SF+F+GP Sbjct: 626 --------------------------------------------LSDPHRPIASFMFMGP 641 Query: 607 TGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAV 666 TGVGKTEL KALA++MF+++EA+ EGG LTE V Sbjct: 642 TGVGKTELAKALASYMFNTEEAL----------------------------EGGQLTETV 673 Query: 667 RRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQ 726 RRRPY+VIL DE+EKAH DVFN+ LQ+LDDGR+TD QGRTV F NTV+IMTSN Sbjct: 674 RRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSN------- 726 Query: 727 ERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRL 786 + V+ FRPEF+NR+DE +VF PL I+SI ++QL+R+ RL Sbjct: 727 ------------QRVMDAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVKLQLERVQLRL 774 Query: 787 EERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGEL 838 +R ++ +++ A++LL GYDP YGARP+KR IQQ +EN LA+ IL GE Sbjct: 775 ADRKMKLQVTETAIQLLGSLGYDPNYGARPVKRVIQQNVENELAKGILRGEF 826 >UniRef50_Q4UAC3 ClpB protein, putative n=8 Tax=cellular organisms RepID=Q4UAC3_THEAN Length = 1150 Score = 740 bits (1911), Expect = 0.0, Method: Compositional matrix adjust. Identities = 410/1003 (40%), Positives = 591/1003 (58%), Gaps = 175/1003 (17%) Query: 7 TNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQ 66 T+K A+ +A D+ ++E L+ +L+N + +V +L + G+N L+ ++ Sbjct: 130 TDKAWEAITSLTEIANEFDSSYVEGDMLLYSLINDD--NVLKVLNNLGLNVDNLKKELEN 187 Query: 67 ALNRLPQVEGTGGDVQP-SQDLVRVLNLCDKLAQKRG----------------------- 102 L + ++ G+ GD + + L VLN+ + + G Sbjct: 188 HLKKQIRMSGSFGDRKILGRILENVLNISKRYKSEFGVSSITVLAHTATNPPKGSYIVPL 247 Query: 103 DNFISSELFVLA-ALESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQAL 161 D +IS E +L A E L T + + +RG + + E+ + L Sbjct: 248 DKYISVEHLLLGLAAEDTKFFRPYLTKYKITLEKLKDTVLSIRGKRKITTRNTENSYKLL 307 Query: 162 KKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQ 221 K++ DLT+ A GKLDPVIGRD EIRRTI++L RRTKNNPVL+G+PGVGKTAI EGLA Sbjct: 308 NKFSKDLTDMARNGKLDPVIGRDNEIRRTIEILSRRTKNNPVLLGDPGVGKTAIAEGLAN 367 Query: 222 RIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELH 281 RI++G+VP+ LK R+V++LD+ A+VAG YRGEFEERLK +LN++ +G +++FIDE+H Sbjct: 368 RIVSGDVPDSLKNRKVISLDIAAIVAGTMYRGEFEERLKEILNEIENSQGEIVMFIDEIH 427 Query: 282 TMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEP 341 T+VGAG++ G++DAGN+LKP LARGEL C+GATTL EYRQ IEKD ALERRFQ +++ EP Sbjct: 428 TLVGAGESQGSLDAGNILKPMLARGELRCIGATTLQEYRQKIEKDKALERRFQPIYIDEP 487 Query: 342 SVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSI 401 ++E+TI ILRGLKERYE+HH V+I D ++ A LS+RYI DR LPDKAIDLIDEAA+ + Sbjct: 488 NIEETINILRGLKERYEVHHGVRILDSTLIQAVLLSNRYITDRYLPDKAIDLIDEAAAKL 547 Query: 402 RMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEA--------------SKKRLDMLNEE 447 ++Q+ SKP +LD ++R+++QL++E+ +++ ++D K RL ++ Sbjct: 548 KIQLSSKPLQLDIIERKLLQLEMEKISIINDNDNIGILSKNEKENLKPNDKLRLQNIDNL 607 Query: 448 LSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIP 507 +++ +Q EL E W EK+ + + IK ++ KI I++A R DL +EL++ +P Sbjct: 608 VNELTKQKDELNEMWLKEKSLVDNIRNIKERIDIVKIEIDKAERDFDLNHAAELRFETLP 667 Query: 508 ELEKQLE-------------------AATQ---------------------LEGKTMRLL 527 +LE QL+ AT +E LL Sbjct: 668 DLENQLKTNINNYENYIKQVRYGVRSTATNTTNPPEGVLYSSFSYITTYIVMETGGNILL 727 Query: 528 RNKVTDAEIAEVLARWT-------------------------------------GIPVSR 550 R+ VT +IA V+++WT GIP+++ Sbjct: 728 RDTVTKEDIANVVSKWTGVVRGSYILVVGSSVTVVIPFTWILSYRLTKHRNVVIGIPLNK 787 Query: 551 MMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVG 610 +++S++EK+L++ +ELH R+IGQ EA+DAV NA++RSR G+ DP +PI + +FLGPTGVG Sbjct: 788 LIKSQKEKILQLNEELHKRIIGQQEAIDAVVNAVQRSRVGMNDPKKPIAALMFLGPTGVG 847 Query: 611 KTELCKALANFMFDS---------------DEAMVRIDMSEFMEKHSVSRLVGAPPGYVG 655 KTEL KA+A +FDS +A++R DMSE+MEKHSVS+LVGAPPGY+G Sbjct: 848 KTELSKAIAEQLFDSGITLRCLLPRPPTTTKDAIIRFDMSEYMEKHSVSKLVGAPPGYIG 907 Query: 656 YEEGGYLTEAVRRRPYSVILLDEV-------------------EKAHPDVFNILLQVLDD 696 YE+GG LTEA+RR+PYS++L DE+ H DV+NILLQVLDD Sbjct: 908 YEQGGLLTEAIRRKPYSILLFDEMYLHYGACSSPTGVLSYILKSTTHSDVYNILLQVLDD 967 Query: 697 GRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE--RFGELDYAHMKELVLGVVSHNFRPEFI 754 GRLTD GR V+F N+++I TSNLGS I E RF E MK V+ V NF PEF+ Sbjct: 968 GRLTDSLGRKVNFTNSLIIFTSNLGSQNILELARFPE-KRNEMKNKVMTSVRQNFSPEFL 1026 Query: 755 NRIDEVVVFHPLG--------------------EQHIASIAQIQLKRLYKRLEERGYEIH 794 NRIDE +VF L ++ + I +++ +L RL E+ ++ Sbjct: 1027 NRIDEFIVFDSLTKIGTLRCSVTVLGHTVTNTPKRELKKIVNMEMMKLSNRLAEKNIKLS 1086 Query: 795 ISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGE 837 I D A+ +++ GYDP YGARPLKR IQ+QIE+P+A ILS + Sbjct: 1087 IDDAAMSHIADIGYDPAYGARPLKRTIQKQIESPIAVGILSDQ 1129 >UniRef50_Q47KW3 ATPase n=56 Tax=root RepID=Q47KW3_THEFY Length = 830 Score = 734 bits (1896), Expect = 0.0, Method: Compositional matrix adjust. Identities = 400/864 (46%), Positives = 559/864 (64%), Gaps = 90/864 (10%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +R T++ + + AQ A ++ +I H++ L+++ G + L S GI+ +R Sbjct: 2 FERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQ 61 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL-ESRGT 121 + + + + Q G + + +VL L + A + G N+I +E +L + E G Sbjct: 62 QVEEIIGQGQQ--APSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGV 119 Query: 122 LADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQA------------LKKYTIDLT 169 A +L GA + Q + Q+ G QG E Q L ++ +LT Sbjct: 120 AAQVLVKLGADLNRVRQQVIQLLHGY----QGKEPQAAGTAAESAPSTSLVLDQFGRNLT 175 Query: 170 ERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVP 229 + A +GKLDPVIGRD+EI R +QVL RRTKNNPVL+G+PGVGKTA+VEGLAQ+I+ GE+P Sbjct: 176 QAAREGKLDPVIGRDKEIERVMQVLSRRTKNNPVLVGDPGVGKTAVVEGLAQKIVKGEIP 235 Query: 230 EGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKA 289 E LK +++ LD+GALVAG++YRG+FEERL+ VL ++ + G++ILFIDELHT+VGAG A Sbjct: 236 ETLKDKQLYTLDLGALVAGSRYRGDFEERLRKVLKEI-RSRGDIILFIDELHTLVGAGAA 294 Query: 290 DGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAI 349 +GA+DA ++LKP LARGEL +GATTLDEYR+Y+EKDAALERRFQ + V EP++ TI I Sbjct: 295 EGAIDAASILKPMLARGELQTIGATTLDEYRKYLEKDAALERRFQPIQVEEPTISHTIEI 354 Query: 350 LRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKP 409 L+GL++RYE HH V ITD A+VAAA L+ RYI+DR LPDKAIDLIDEA S +R++ + P Sbjct: 355 LKGLRDRYEAHHRVSITDGALVAAAQLADRYISDRYLPDKAIDLIDEAGSRMRIRRMTAP 414 Query: 410 EELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASL 469 +L D +I +++ +++A + D +R L +E + Q ++ E+EWKA Sbjct: 415 PDLREFDEKIAKVRRDKEAAIDAQD---FERAAALRDEEKRLQAQRAQKEKEWKA----- 466 Query: 470 SGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRN 529 GD+ ++E Sbjct: 467 -----------------------GDMDTVAE----------------------------- 474 Query: 530 KVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA 589 V + IAEVLA TGIPV R+ E E +LLRME+ELH RVIGQ++A+ A+S AIRR+RA Sbjct: 475 -VNEELIAEVLATATGIPVFRLTEEESSRLLRMEEELHKRVIGQDDAIKALSQAIRRTRA 533 Query: 590 GLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGA 649 GL DP RP GSF+F GP+GVGKTELCKALA F+F ++A++++DMSEFMEKH+VSRL G+ Sbjct: 534 GLKDPKRPGGSFIFAGPSGVGKTELCKALAEFLFGDEDALIQLDMSEFMEKHTVSRLFGS 593 Query: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709 PPGYVGYEEGG LTE VRR+P+SV+L DE+EKAH D+FN LLQVL++GRLTD QGR VDF Sbjct: 594 PPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHGDIFNSLLQVLEEGRLTDAQGRNVDF 653 Query: 710 RNTVVIMTSNLGSDLIQE----RFGELD-----YAHMKELVLGVVSHNFRPEFINRIDEV 760 +NT+++MT+NLG+ I + F D Y MK V + +FRPEF+NR+D+ Sbjct: 654 KNTIIVMTTNLGTRDISKGQPMGFARPDDTQTTYDRMKAKVNEELKQHFRPEFLNRVDDT 713 Query: 761 VVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRA 820 +VFH L ++ I +I + + RL +RL++R I + A K+L+E GYDPV GARPL+R Sbjct: 714 IVFHQLTQKEITAIVDLMVARLDERLKDRDMGIEVRPHAKKILAERGYDPVLGARPLRRT 773 Query: 821 IQQQIENPLAQQILSGELVPGKVI 844 IQ++IE+ L+++IL GEL G+++ Sbjct: 774 IQREIEDALSEKILYGELKSGQIV 797 >UniRef50_P35100 ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplastic n=354 Tax=cellular organisms RepID=CLPC_PEA Length = 922 Score = 733 bits (1893), Expect = 0.0, Method: Compositional matrix adjust. Identities = 404/879 (45%), Positives = 572/879 (65%), Gaps = 90/879 (10%) Query: 3 LDRLTNKF--QLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 +R T K + LA ++ LGH+ F+ ++ L+ + G + +L S GIN Sbjct: 92 FERFTEKAIKVIMLAQEEARRLGHN--FVGTEQILLGLIGEGTGIAAKVLKSMGINLKDA 149 Query: 61 RTDINQALNRLPQVEGTGG---DVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALE 117 R ++ + + R G+G ++ + RVL L + A++ G N+I SE +L L Sbjct: 150 RVEVEKIIGR-----GSGFVAVEIPFTPRAKRVLELSQEEARQLGHNYIGSEHLLLGLLR 204 Query: 118 SRGTLAD-ILKAAGATTANITQAIEQMRG------GESVNDQGAEDQRQALKKYTIDLTE 170 +A +L+ GA NI + +M G +V + ++ L++Y +LT+ Sbjct: 205 EGEGVAARVLENLGADPTNIRTQVIRMVGESADSVTATVGSGSSNNKTPTLEEYGTNLTK 264 Query: 171 RAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPE 230 AE+GKLDPV+GR +I R Q+L RRTKNNP LIGEPGVGKTAI EGLAQRI NG+VPE Sbjct: 265 LAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPE 324 Query: 231 GLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKAD 290 ++G++V+ LDMG LVAG KYRGEFEERLK ++ ++ KQ ++ILFIDE+HT++GAG A+ Sbjct: 325 TIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEI-KQSDDIILFIDEVHTLIGAGAAE 383 Query: 291 GAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAIL 350 GA+DA N+LKPALARGEL C+GATTLDEYR++IEKD LERRFQ V V EP+V++TI IL Sbjct: 384 GAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPDLERRFQPVKVPEPTVDETIQIL 443 Query: 351 RGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPE 410 +GL+ERYE+HH ++ TD A++AAA LS++YI+DR LPDKAIDL+DEA S +R+Q PE Sbjct: 444 KGLRERYEIHHKLRYTDEALIAAAQLSYQYISDRFLPDKAIDLVDEAGSRVRLQHAQLPE 503 Query: 411 ELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASL- 469 E LD+ + ++ E++ ++ D EL DKE + KA+ ++L Sbjct: 504 EAKELDKEVRKIVKEKEEYVRNQDFEKAG-------ELRDKEM-------DLKAQISALI 549 Query: 470 -SGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLR 528 G + KAE E A EG Sbjct: 550 EKGKEMSKAETETAD------------------------------------EGPI----- 568 Query: 529 NKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSR 588 VT+ +I +++ WTGIPV ++ E ++LL+ME LH R+IGQ+EAV A+S AIRR+R Sbjct: 569 --VTEVDIQHIVSSWTGIPVDKVSADESDRLLKMEDTLHKRIIGQDEAVQAISRAIRRAR 626 Query: 589 AGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVG 648 GL +PNRPI SF+F GPTGVGK+EL KALA + F S+EAM+R+DMSEFME+H+VS+L+G Sbjct: 627 VGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIG 686 Query: 649 APPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVD 708 +PPGYVGY EGG LTEAVRRRPY+V+L DE+EKAHPDVFN++LQ+L+DGRLTD +GRTVD Sbjct: 687 SPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVD 746 Query: 709 FRNTVVIMTSNLGSDLIQE---RFG-ELD-------YAHMKELVLGVVSHNFRPEFINRI 757 F+NT++IMTSN+GS +I++ R G +LD Y +K LV + FRPEF+NR+ Sbjct: 747 FKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRL 806 Query: 758 DEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPL 817 DE++VF L + + IA I LK +++RL+ + E+ +++ + + GY+P YGARPL Sbjct: 807 DEMIVFRQLTKLEVKEIADIMLKEVFQRLKTKEIELQVTERFRDRVVDEGYNPSYGARPL 866 Query: 818 KRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAV 856 +RAI + +E+ +A+++L+ E+ G + ++V+ D V V Sbjct: 867 RRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGKVIV 905 >UniRef50_P31541 ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4A, chloroplastic n=62 Tax=cellular organisms RepID=CLPAA_SOLLC Length = 926 Score = 732 bits (1890), Expect = 0.0, Method: Compositional matrix adjust. Identities = 413/877 (47%), Positives = 574/877 (65%), Gaps = 85/877 (9%) Query: 3 LDRLTNKF--QLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 +R T K + LA ++ LGH+ F+ ++ L+ + G + +L S GIN Sbjct: 94 FERFTEKAIKVIMLAQEEARRLGHN--FVGTEQILLGLIGEGTGIAAKVLKSMGINLKDA 151 Query: 61 RTDINQALNRLPQVEGTGG---DVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALE 117 R ++ + + R G+G ++ + RVL L + A++ G N+I SE +L L Sbjct: 152 RVEVEKIIGR-----GSGFIAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLR 206 Query: 118 SRGTLAD-ILKAAGATTANITQAIEQMRG------GESVNDQGAEDQRQALKKYTIDLTE 170 +A +L+ GA NI + +M G G SV + + L++Y +LT+ Sbjct: 207 EGEGVAARVLENLGADPTNIRTQVIRMVGESSEAVGASVGGGTSGLKMPTLEEYGTNLTK 266 Query: 171 RAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPE 230 AE+GKLDPV+GR +I R Q+L RRTKNNP LIGEPGVGKTAI EGLAQRI NG+VPE Sbjct: 267 LAEEGKLDPVVGRQAQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPE 326 Query: 231 GLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKAD 290 ++G++V+ LDMG LVAG KYRGEFEERLK ++ ++ KQ +ILFIDE+HT++GAG A+ Sbjct: 327 TIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEI-KQSDEIILFIDEVHTLIGAGAAE 385 Query: 291 GAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAIL 350 GA+DA N+LKPALARGEL C+GATTLDEYR++IEKD ALERRFQ V V EPSV++TI IL Sbjct: 386 GAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQIL 445 Query: 351 RGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPE 410 +GL+ERYE+HH + TD AI AAA LSH+YI+DR LPDKAIDLIDEA S +R++ PE Sbjct: 446 KGLRERYEIHHKLHYTDEAIEAAAKLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPE 505 Query: 411 ELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLS 470 E L++ + Q + KE +EA + + EL D+E + KA+ ++L Sbjct: 506 EARELEKELRQ-------ITKEKNEAVRGQDFEKAGELRDREM-------DLKAQISAL- 550 Query: 471 GTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNK 530 I E++K E GD A G I Sbjct: 551 ----IDKNKEKSKAESE----AGDAA-------GPI------------------------ 571 Query: 531 VTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590 VT+A+I +++ WTGIPV ++ E ++LL+ME+ LH RVIGQ+EAV A+S AIRR+R G Sbjct: 572 VTEADIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHTRVIGQDEAVKAISRAIRRARVG 631 Query: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAP 650 L +PNRPI SF+F GPTGVGK+EL K+LA + F S+EAM+R+DMSEFME+H+VS+L+G+P Sbjct: 632 LKNPNRPIASFIFSGPTGVGKSELAKSLATYYFGSEEAMIRLDMSEFMERHTVSKLIGSP 691 Query: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFR 710 PGYVGY EGG LTEAVRRRPY+V+L DE+EKAHPDVFN++LQ+L+DGRLTD +GRTVDF+ Sbjct: 692 PGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFK 751 Query: 711 NTVVIMTSNLGSDLIQE---RFG-ELD-------YAHMKELVLGVVSHNFRPEFINRIDE 759 NT++IMTSN+GS +I++ R G +LD Y +K LV + FRPEF+NR+ E Sbjct: 752 NTLLIMTSNVGSSVIEKGGRRIGFDLDFDEKDSSYNRIKSLVTEELKQYFRPEFLNRLSE 811 Query: 760 VVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKR 819 ++VF L + + IA I LK ++ RL+ + E+ +++ + + GY+P YGARPL+R Sbjct: 812 MIVFRQLTKLEVKEIADIMLKEVFVRLKNKEIELQVTERFRDRVVDEGYNPSYGARPLRR 871 Query: 820 AIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAV 856 AI + +E+ +A+++L+GE+ G + ++V+ D V V Sbjct: 872 AIMRLLEDSMAEKMLAGEIKEGDSVIVDVDSDGNVTV 908 >UniRef50_P37571 Negative regulator of genetic competence clpC/mecB n=137 Tax=Bacteria RepID=CLPC_BACSU Length = 810 Score = 729 bits (1881), Expect = 0.0, Method: Compositional matrix adjust. Identities = 416/870 (47%), Positives = 570/870 (65%), Gaps = 84/870 (9%) Query: 1 MRLDRLTNKFQ--LALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAG 58 M R T + Q LALA ++L LGH+N E H++ L+ + G + L + G+ + Sbjct: 1 MMFGRFTERAQKVLALAQEEALRLGHNNIGTE--HILLGLVREGEGIAAKALQALGLGSE 58 Query: 59 QLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL-E 117 +++ ++ + R ++ T + + +V+ L A+K G +++ +E +L + E Sbjct: 59 KIQKEVESLIGRGQEMSQT---IHYTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIRE 115 Query: 118 SRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQA----LKKYTIDLTERAE 173 G A +L G + Q + Q+ G A A L DLT A+ Sbjct: 116 GEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSSAAGTNSNANTPTLDSLARDLTAIAK 175 Query: 174 QGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLK 233 + LDPVIGR +EI+R I+VL RRTKNNPVLIGEPGVGKTAI EGLAQ+IIN EVPE L+ Sbjct: 176 EDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILR 235 Query: 234 GRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAM 293 +RV+ LDMG +VAG KYRGEFE+RLK V++++ +Q GN+ILFIDELHT++GAG A+GA+ Sbjct: 236 DKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDEI-RQAGNIILFIDELHTLIGAGGAEGAI 294 Query: 294 DAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGL 353 DA N+LKP+LARGEL C+GATTLDEYR+YIEKDAALERRFQ + V +PSV+++I IL+GL Sbjct: 295 DASNILKPSLARGELQCIGATTLDEYRKYIEKDAALERRFQPIQVDQPSVDESIQILQGL 354 Query: 354 KERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELD 413 ++RYE HH V ITD AI AA LS RYI+DR LPDKAIDLIDEA S +R++ + P L Sbjct: 355 RDRYEAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLK 414 Query: 414 RLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGT- 472 L++++ +++ KE D A Q E E+ ASL T Sbjct: 415 ELEQKLDEVR-------KEKDAAV----------------QSQEFEK-----AASLRDTE 446 Query: 473 QTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVT 532 Q ++ ++E K + + EKQ + ++ VT Sbjct: 447 QRLREQVEDTKKSWK----------------------EKQGQENSE------------VT 472 Query: 533 DAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLA 592 +IA V++ WTG+PVS++ ++E +KLL ME LH RVIGQ+EAV AV+ A+RR+RAGL Sbjct: 473 VDDIAMVVSSWTGVPVSKIAQTETDKLLNMENILHSRVIGQDEAVVAVAKAVRRARAGLK 532 Query: 593 DPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPG 652 DP RPIGSF+FLGPTGVGKTEL +ALA +F +E+M+RIDMSE+MEKHS SRLVG+PPG Sbjct: 533 DPKRPIGSFIFLGPTGVGKTELARALAESIFGDEESMIRIDMSEYMEKHSTSRLVGSPPG 592 Query: 653 YVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNT 712 YVGY+EGG LTE VRR+PYSV+LLDE+EKAHPDVFNILLQVL+DGRLTD +GRTVDFRNT Sbjct: 593 YVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNT 652 Query: 713 VVIMTSNLG-SDLIQERFGEL-------DYAHMKELVLGVVSHNFRPEFINRIDEVVVFH 764 ++IMTSN+G S+L + ++ ++ MK+ V+G + FRPEFINRIDE++VFH Sbjct: 653 ILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFH 712 Query: 765 PLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQ 824 L ++H+ I + +L KRL+E+ I ++D A ++E G D YGARPL+RAIQ+ Sbjct: 713 SLEKKHLTEIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKH 772 Query: 825 IENPLAQQILSGELVPGKVIRLEVNEDRIV 854 +E+ L++++L G + G+ I L+V + V Sbjct: 773 VEDRLSEELLRGNIHKGQHIVLDVEDGEFV 802 >UniRef50_C9KP02 Negative regulator of genetic competence ClpC/MecB n=3 Tax=cellular organisms RepID=C9KP02_9FIRM Length = 840 Score = 723 bits (1866), Expect = 0.0, Method: Compositional matrix adjust. Identities = 407/875 (46%), Positives = 561/875 (64%), Gaps = 101/875 (11%) Query: 4 DRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTD 63 + T++ A+ AQ A + +I H++ LL++EG L +AG+ Sbjct: 5 NHFTSRAIKAIEFAQYAARELEQDYIGTEHILLGLLHEEGSVAFAALQAAGLT------- 57 Query: 64 INQALNRLPQVEGTGGDVQ-PSQDLV------RVLNLCDKLAQKRGDNFISSELFVLAAL 116 + + R+ + GD + PS + RV+ + AQ G N+I +E +L+ L Sbjct: 58 FDAVMQRVEAM--VAGDAEYPSDNPYYTPRAKRVMEGAVEEAQTLGHNYIGTEHILLSLL 115 Query: 117 E-SRGTLADILKAAG----ATTANITQAIEQMR---GGESVNDQGAEDQR--QALKKYTI 166 E + G A++L G A + I+ GE + A+ ++ Q +KKY Sbjct: 116 EETEGAAAELLIGMGVDIDALQGEVLDRIDHPHPEGDGEPSRAEKAKGRQAPQLIKKYGR 175 Query: 167 DLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIING 226 +L + A++ ++DPVIGRD+EI+R IQ+L RRTKN P+L+GEPGVGKTAI EGLAQRI+ G Sbjct: 176 NLNDMAKEDRMDPVIGRDKEIQRVIQILARRTKNTPILLGEPGVGKTAIAEGLAQRIVEG 235 Query: 227 EVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGA 286 VP L+ ++V++L + +LVAGAKYRGEFEERLKG+++++ +Q+G +ILFIDE+HT+VGA Sbjct: 236 SVPYMLQDKKVVSLSLASLVAGAKYRGEFEERLKGLIDEV-RQDGTIILFIDEMHTLVGA 294 Query: 287 GKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDT 346 G A+GA+DA N+LKPAL+RGE+ +GATTLDEY++++EKDAAL RRFQ + V EPS+ED Sbjct: 295 GAAEGALDAANILKPALSRGEIQIIGATTLDEYKKHLEKDAALSRRFQTILVEEPSIEDA 354 Query: 347 IAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQID 406 IL GL+ +YE H I D AI AA LSHRYI DR LPDKAIDL+DEAAS +RM+ Sbjct: 355 KKILMGLRGKYEAFHCAHIEDAAIEAAVRLSHRYITDRFLPDKAIDLMDEAASKVRMKQV 414 Query: 407 SKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEK 466 ++PE+L + R+ +L +E++A + D R+ D E Sbjct: 415 AQPEKLQEIRARLEKLGVEKEAAISAQDYERAARI-------RDDE-------------- 453 Query: 467 ASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRL 526 Q +K ELE+AK E+ GK+ Sbjct: 454 ------QKVKDELEEAKRRFEK-------------------------------RGKS--- 473 Query: 527 LRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRR 586 R VT +IA+V+A+WTG+PV ++ E ++LL ME+ L RV+GQ EAV+AVS AIRR Sbjct: 474 -RITVTADDIADVVAQWTGVPVRQIAAKESDRLLHMEKILTRRVVGQQEAVEAVSKAIRR 532 Query: 587 SRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRL 646 +RAGL DP RPIGSFLFLGPTGVGKTEL KAL+ +F +++A++R DMSE+MEK++VSR+ Sbjct: 533 ARAGLKDPKRPIGSFLFLGPTGVGKTELAKALSEALFGTEDAIIRFDMSEYMEKYAVSRM 592 Query: 647 VGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRT 706 VGAPPGYVGYEEGG LT+AVRR+PYS+ILLDE+EKAHPDVFN+LLQVLDDGRLTDG+GRT Sbjct: 593 VGAPPGYVGYEEGGQLTDAVRRKPYSIILLDEIEKAHPDVFNVLLQVLDDGRLTDGKGRT 652 Query: 707 VDFRNTVVIMTSNLGSDLIQERFGELDYA------------HMKELVLGVVSHNFRPEFI 754 VDFRNTV+IMTSN G+ L+++ L +A K+ VLG V H F+PEF+ Sbjct: 653 VDFRNTVIIMTSNAGATLLKKSAPALGFAVGSGDEKQEAEDAAKKRVLGEVRHIFKPEFL 712 Query: 755 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 814 NRIDE++VFHPLG + ++ I I L+ + RL E+ + +S A +L E G D YGA Sbjct: 713 NRIDELIVFHPLGREELSKIIDILLRDVRTRLAEKEIRLEVSPAAKNVLVEKGTDFKYGA 772 Query: 815 RPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVN 849 RPLKRAIQ+ IE+ +A+ +L+ + G I++ N Sbjct: 773 RPLKRAIQKLIEDEIAEHLLARDFKRGDTIQVRKN 807 >UniRef50_C8NK17 ATP-dependent Clp protease ATP-binding subunit n=21 Tax=Bacteria RepID=C8NK17_COREF Length = 927 Score = 722 bits (1863), Expect = 0.0, Method: Compositional matrix adjust. Identities = 401/889 (45%), Positives = 557/889 (62%), Gaps = 106/889 (11%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +R T++ + + AQ A ++ +I H++ L+++ G + L S GI+ +R Sbjct: 2 FERFTDRARRVIVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLDAVRQ 61 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL-ESRGT 121 ++ + + + T G + + +VL L + + G +I +E +L + E G Sbjct: 62 EVEEIIGHGSKP--TTGHIPFTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGEGV 119 Query: 122 LADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQA--------------------- 160 A +L GA + Q + Q+ G G+ D Q Sbjct: 120 AAQVLVKLGADLPRVRQQVIQLLSGYEGGQGGSPDSPQGGQGGDAVGAGSAPGGRATGSG 179 Query: 161 ---------LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVG 211 L ++ +LT+ A+ GKLDPV+GRD+EI R +QVL RRTKNNPVLIGEPGVG Sbjct: 180 AGERSNSLVLDQFGRNLTQAAKDGKLDPVVGRDKEIERIMQVLSRRTKNNPVLIGEPGVG 239 Query: 212 KTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEG 271 KTA+VEGLA I+NG+VPE LK ++V +LD+G+LVAG++YRG+FEERLK VL ++ Q G Sbjct: 240 KTAVVEGLALDIVNGKVPETLKDKQVYSLDLGSLVAGSRYRGDFEERLKKVLKEI-NQRG 298 Query: 272 NVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALER 331 ++ILFIDE+HT+VGAG A+GA+DA ++LKP LARGEL +GATTLDEYR++IEKDAALER Sbjct: 299 DIILFIDEIHTLVGAGAAEGAIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALER 358 Query: 332 RFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAI 391 RFQ V V EPSVE +I IL+GL++RYE HH V ITD A+VAAA LS RYI DR LPDKA+ Sbjct: 359 RFQPVQVPEPSVELSIEILKGLRDRYEAHHRVSITDGALVAAAQLSDRYINDRFLPDKAV 418 Query: 392 DLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDK 451 DLIDEA + +R++ + PE L +D RI ++ E++A + D L DK Sbjct: 419 DLIDEAGARMRIKRMTAPESLREVDERIADVRREKEAAIDAQDFEKAAGL-------RDK 471 Query: 452 ERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEK 511 ER+ E +AEK E+ R GDL ++E Sbjct: 472 ERKLGE----ERAEK--------------------EKQWRSGDLEEIAE----------- 496 Query: 512 QLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVI 571 V + +IAEVLA WTGIPV ++ E+E +LL ME+ELH R+I Sbjct: 497 -------------------VGEEQIAEVLATWTGIPVFKLTEAESSRLLNMEEELHKRII 537 Query: 572 GQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVR 631 GQ+EAV AVS AIRR+RAGL DP RP GSF+F GP+GVGKTEL KALA F+F D+++++ Sbjct: 538 GQDEAVKAVSRAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALAEFLFGDDDSLIQ 597 Query: 632 IDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILL 691 IDM EF ++ + SRL GAPPGYVGYEEGG LTE VRR+P+SV+L DE+EKAH +++N LL Sbjct: 598 IDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLL 657 Query: 692 QVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFG-----------ELDYAHMKEL 740 QVL+DGRLTDGQGR VDF+NTV+I TSNLG+ I + G + Y MK Sbjct: 658 QVLEDGRLTDGQGRIVDFKNTVLIFTSNLGTQDISKAVGLGFSGSNETDSDAQYDRMKNK 717 Query: 741 VLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEAL 800 V + +FRPEF+NRIDE+VVFH L + I + ++ + R+ + L ++ I ++D+A Sbjct: 718 VHDELKKHFRPEFLNRIDEIVVFHQLTREQIIQMVELLIGRVSRALADKDMGIELTDKAK 777 Query: 801 KLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVN 849 LL+ G+DPV GARPL+R IQ++IE+ ++++IL GE+ G+++ ++V+ Sbjct: 778 ALLASRGFDPVLGARPLRRTIQREIEDAMSEKILFGEIGAGEIVTVDVD 826 >UniRef50_O78410 ATP-dependent Clp protease ATP-binding subunit clpA homolog n=45 Tax=root RepID=CLPC_GUITH Length = 819 Score = 717 bits (1850), Expect = 0.0, Method: Compositional matrix adjust. Identities = 388/853 (45%), Positives = 553/853 (64%), Gaps = 87/853 (10%) Query: 3 LDRLTNKF--QLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 +R T K + LA ++ LGH+ F+ ++ L+ + G + +L S G+N Sbjct: 2 FERFTEKAIKVIMLAQEEARRLGHN--FVGTEQILLGLIGEGTGIAAKVLKSMGVNLKDA 59 Query: 61 RTDINQALNRLPQVEGTGG---DVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL- 116 R ++ + + R G+G ++ + RVL L + A++ G N+I +E +L + Sbjct: 60 RVEVEKIIGR-----GSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIR 114 Query: 117 ESRGTLADILKAAGATTANITQAIEQMRGGE---SVNDQGAEDQRQALKKYTIDLTERAE 173 E G A +L+ + + ++ G S + + + L+++ +LT++A Sbjct: 115 EGEGVAARVLENLALDLTKVRTQVIRLLGDTAEVSATNGQTKGKTPTLEEFGSNLTQKAA 174 Query: 174 QGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLK 233 +GKLDPVIGR +EI R IQ+L RRTKNNP+LIGEPGVGKTAI EGLAQRI N +VP+ L+ Sbjct: 175 EGKLDPVIGRQKEIERVIQILGRRTKNNPILIGEPGVGKTAIAEGLAQRINNRDVPDILE 234 Query: 234 GRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAM 293 +RV+ LD+G LVAG KYRGEFEERLK +++++ + NVIL IDE+HT++GAG A+GA+ Sbjct: 235 DKRVVTLDIGLLVAGTKYRGEFEERLKKIIDEI-RVANNVILVIDEVHTLIGAGAAEGAI 293 Query: 294 DAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGL 353 DA N+LKPALARGE+ C+GATTL+EYR++IEKD+ALERRFQ V V EPSVE+TI IL GL Sbjct: 294 DAANILKPALARGEMQCIGATTLEEYRKHIEKDSALERRFQPVMVGEPSVEETIEILYGL 353 Query: 354 KERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELD 413 ++RYE HH + I+D A+ AAA + +YIADR LPDKAIDLIDEA S +R+ P Sbjct: 354 RDRYEKHHKLVISDEALSAAAKFADQYIADRFLPDKAIDLIDEAGSRVRLMNSQLPPAAR 413 Query: 414 RLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQ 473 LD+ E + ++K+ DEA + + +L D+E E KA+ A+++ ++ Sbjct: 414 ELDK-------ELREILKQKDEAVRSQDFETAGQLRDREM-------EIKAQIAAIAHSK 459 Query: 474 TIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTD 533 GD E+ VT+ Sbjct: 460 K------------------GDEENTKEVSV---------------------------VTE 474 Query: 534 AEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLAD 593 +IA+++A WTGIPV++M SE EKLL+ME+ LH R+IGQ+EAV AVS AIRR+R GL + Sbjct: 475 EDIAQIVAAWTGIPVNKMTRSESEKLLQMEETLHGRIIGQDEAVVAVSKAIRRARVGLKN 534 Query: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGY 653 PNRPI SF+F GPTGVGKTEL KALA++ F S+EAMVR+DMSE+ME+H+VS+L+G+PPGY Sbjct: 535 PNRPIASFIFSGPTGVGKTELTKALASYFFGSEEAMVRLDMSEYMERHTVSKLIGSPPGY 594 Query: 654 VGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTV 713 VGY EGG LTE+VRRRPY+V+L DE+EK HPDVFN+LLQ+L+DGRLTD +GRTVDF+NT+ Sbjct: 595 VGYNEGGQLTESVRRRPYTVVLFDEIEKGHPDVFNLLLQILEDGRLTDSKGRTVDFKNTL 654 Query: 714 VIMTSNLGSDLIQERFG-----------ELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 762 +I+TSN+GS +I++ G E Y +K LV + FRPEF+NR+DE++V Sbjct: 655 LILTSNVGSKVIEKGGGGLGFDLSEDQTESQYGRIKALVNEELKQYFRPEFLNRLDEIIV 714 Query: 763 FHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQ 822 F L + + IA+I LK ++ R+ E+G ++ ++ L GY+P+YGARPL+RA+ Sbjct: 715 FRQLTKDEVGEIAEIMLKEVFTRISEKGIQLEVTARFKTHLINEGYNPIYGARPLRRAVM 774 Query: 823 QQIENPLAQQILS 835 + +E+ L+++ L+ Sbjct: 775 RLLEDTLSEEFLA 787 >UniRef50_C6HIF6 Heat shock protein n=1 Tax=Ajellomyces capsulatus H143 RepID=C6HIF6_AJECH Length = 762 Score = 709 bits (1829), Expect = 0.0, Method: Compositional matrix adjust. Identities = 364/716 (50%), Positives = 495/716 (69%), Gaps = 42/716 (5%) Query: 145 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204 GG + G E ++ AL+ Y +DLT RA+ GKLDPVIGRD EI+RTIQ+L RRTKNNPVL Sbjct: 70 GGTHRMNLGGEPEKPALEAYGVDLTARAKDGKLDPVIGRDGEIQRTIQILSRRTKNNPVL 129 Query: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264 IG G GKTAI+EGLAQRI+ G+VPE +K +RV+ALD+G L+AGAK+RG+FEERLK VL Sbjct: 130 IGSAGTGKTAILEGLAQRIVRGDVPESVKDKRVIALDLGQLIAGAKFRGDFEERLKKVLK 189 Query: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324 ++ +G VILF+DELHT++G GKA+G++DA N+LKPAL+RGEL C GATTL+EYRQ IE Sbjct: 190 EVEDAQGGVILFVDELHTLLGLGKAEGSIDASNLLKPALSRGELQCCGATTLNEYRQ-IE 248 Query: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384 KD AL RRFQ + V EPSV DTI+ILRG+KE+YE+HH V+ITD A+VAAAT S+RYI DR Sbjct: 249 KDVALARRFQPILVEEPSVPDTISILRGIKEKYEVHHGVRITDGALVAAATYSNRYITDR 308 Query: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444 LPDKAIDL+DEAAS++R+Q +SKP+ + LDR+I+ +++E ++L KE+D SK+R + L Sbjct: 309 YLPDKAIDLVDEAASALRLQQESKPDAIQELDRQIMTIQIELESLRKETDITSKERREKL 368 Query: 445 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504 E L K+ + EL W+ EKA L + K +LE+A++ +E A+R G+ A+ SEL+Y Sbjct: 369 EELLKTKQNKVKELTAVWEKEKAELDTIKQAKEDLERARVELELAQRQGNFAKASELRYS 428 Query: 505 KIPELEKQL-----EAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKL 559 IP LE +L E AT LL + VT +IA V++R TGIPV+++M E EKL Sbjct: 429 IIPGLESKLPKEGSETATTTTADGEVLLHDSVTSDDIAAVVSRTTGIPVNKLMAGEIEKL 488 Query: 560 LRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALA 619 + ME L V GQ+EA+ AV+NA+R RAGL+ N+P+ SF+FLGPTGVGKTELCK +A Sbjct: 489 INMEDTLRQSVRGQDEALSAVANAVRMQRAGLSGENKPLASFMFLGPTGVGKTELCKKMA 548 Query: 620 NFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEV 679 F+F ++ A++R DMSEF EKH+VSRL+G+P GYVG G RRR Sbjct: 549 GFLFSTETAVLRFDMSEFQEKHTVSRLIGSPAGYVGTSPSG-----PRRR---------- 593 Query: 680 EKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLI---QERFGELDYAH 736 LTD QG +DFRNT++++TSNLG++++ GE + Sbjct: 594 ------------------LLTDAQGHKIDFRNTLIVLTSNLGAEMLVAADSSVGEEISSD 635 Query: 737 MKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHIS 796 +K V+ +V ++ PEF+NRIDE ++F L + + I I+L+ L +RL++R + + Sbjct: 636 IKAAVMSIVQSSYPPEFLNRIDEFIIFKRLSKPALRDIVDIRLQELQQRLDDRRITLTVE 695 Query: 797 DEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDR 852 D L + GYDP YGARPL R I ++I N LA +I+ GE+V G+ + + N D+ Sbjct: 696 DNVKDWLCDKGYDPRYGARPLNRLISKEIGNRLADKIIRGEVVTGQGVSVIFNADK 751 >UniRef50_C7PZ63 ATPase AAA-2 domain protein n=7 Tax=Actinomycetales RepID=C7PZ63_CATAD Length = 841 Score = 707 bits (1826), Expect = 0.0, Method: Compositional matrix adjust. Identities = 391/815 (47%), Positives = 530/815 (65%), Gaps = 81/815 (9%) Query: 49 LLTSAGINAGQLRTDINQALNRLPQVEGTGGDVQP--SQDLVRVLNLCDKLAQKRGDNFI 106 +L +A ++ +L I ++L G+ +P + RVL +L++ G +I Sbjct: 84 ILAAANVDPDRLAQTIKKSL----PASGSTPSAEPGLTPAAKRVLMRAHELSRSSGSTYI 139 Query: 107 SSELFVLAALESRGTLA-DILKAAGATTANITQAIEQMRGGESVNDQGAE--DQRQALKK 163 + + A E + + A +L ++ + I + E + G E L + Sbjct: 140 GPQHILAALTEDQDSGAGHVLNTTQVDAKDLGKRITKASRAEGMP-TGPEQPSDTPTLDE 198 Query: 164 YTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRI 223 Y D+TE A+ GKLDPV+GR +EI +T++VL RRTKNNPVLIG+PGVGKTAIVEGLAQRI Sbjct: 199 YGRDMTEDAKAGKLDPVVGRADEIEQTVEVLSRRTKNNPVLIGDPGVGKTAIVEGLAQRI 258 Query: 224 INGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTM 283 ++G+VP L+G+RV+ LD+ ALVAG+KYRGEFEERLK V++++ K + ILFIDELHT+ Sbjct: 259 VSGDVPTTLEGKRVVMLDLAALVAGSKYRGEFEERLKNVIDEVGKAADSTILFIDELHTV 318 Query: 284 VGAGKA-DGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPS 342 VGAG +G+MDAGN++KPAL+RGEL+ +GATT+DEYR+ IEKDAALERRFQ V +AEP+ Sbjct: 319 VGAGSGGEGSMDAGNIMKPALSRGELNVIGATTIDEYRKNIEKDAALERRFQPVLIAEPT 378 Query: 343 VEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIR 402 VE+TI IL GL++RYE HH V+ TD A+ AAA +S RYI+DR LPDKAIDLID+A + IR Sbjct: 379 VEETIEILEGLRDRYEAHHGVKFTDEALAAAALMSDRYISDRFLPDKAIDLIDQAGARIR 438 Query: 403 MQ-IDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEE 461 ++ + E ++R D KL + L +E DEA ++ E D+ + EE Sbjct: 439 LRNLGKSTEAIERED------KLAK--LTRERDEA-------VSAENYDRAKDLKARIEE 483 Query: 462 WKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEG 521 E A++ + RR G L Sbjct: 484 LNDEVATI------------------EERREGTL-------------------------- 499 Query: 522 KTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVS 581 KVT+ +IAEV++R TGIPV+++ E ER +LL++E LH RV+GQ EAV A++ Sbjct: 500 --------KVTEKDIAEVVSRRTGIPVAQLNEDERTRLLKLEDALHDRVVGQEEAVTAIA 551 Query: 582 NAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKH 641 A+RRSRAG+ DPNRP GSFLFLGPTGVGKTEL KALA +F ++ ++R DMSEF EKH Sbjct: 552 EAVRRSRAGMGDPNRPTGSFLFLGPTGVGKTELAKALAELLFGDEDRLIRFDMSEFQEKH 611 Query: 642 SVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTD 701 +VSRL+G+PPGYVGYEE G LTE VRR+PYSVIL DEVEKAHPD+FN LLQVLDDGRLTD Sbjct: 612 TVSRLLGSPPGYVGYEEAGQLTERVRRKPYSVILFDEVEKAHPDIFNTLLQVLDDGRLTD 671 Query: 702 GQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVV 761 QGRTVDFR+TVVIMTSN+GS LI G+ D +++ ++ V F PEFINR+DEVV Sbjct: 672 AQGRTVDFRHTVVIMTSNIGSQLILAHMGDTD--EIRDQLMDQVRSFFPPEFINRLDEVV 729 Query: 762 VFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAI 821 +FH LG+ + +I + L +RL+ + + ++++A L E GY P +GARPL+R I Sbjct: 730 IFHSLGKPEMGNIVDLMLDSSRRRLKAQELGLEVTEKAKNWLVERGYKPEFGARPLRRTI 789 Query: 822 QQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAV 856 Q +++N +A +LSG+ PG I + +D +V Sbjct: 790 QSELDNKVATLLLSGDTHPGDTIVADEADDHLVCT 824 >UniRef50_Q6KHS7 ATP-dependent Clp protease, ATPase subunit n=3 Tax=Mycoplasma RepID=Q6KHS7_MYCMO Length = 711 Score = 706 bits (1823), Expect = 0.0, Method: Compositional matrix adjust. Identities = 344/704 (48%), Positives = 518/704 (73%), Gaps = 12/704 (1%) Query: 156 DQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAI 215 D LK++ +LT+ A++ L+PVIGR++EIRR I++L R+TKNNPVL+GEPGVGKTAI Sbjct: 9 DDNDPLKQFGRNLTDLAKKNMLEPVIGREDEIRRIIRILSRKTKNNPVLVGEPGVGKTAI 68 Query: 216 VEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVIL 275 VEGLA++I + +VPE LK + V+ + + +L+AGA Y+G+FEER+K +++ + K +G I+ Sbjct: 69 VEGLAKKIHDAQVPEDLKNKEVIEISLPSLIAGASYQGQFEERIKSLMDKIEKNQGKYII 128 Query: 276 FIDELHTMVGAGK--ADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRF 333 FIDE+H ++G GK ++ MDA N+ KPALARG++ VGATT++EYR+YIE D+ALERR Sbjct: 129 FIDEIHLLIGTGKNSSNSTMDAANIFKPALARGQMQLVGATTIEEYRKYIESDSALERRM 188 Query: 334 QKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDL 393 QKV VAEP++EDTI ILRG+K R+E H+V+I+D A++AAA LS RYI+DR LPDKAIDL Sbjct: 189 QKVKVAEPNIEDTITILRGIKGRFETFHNVKISDKALIAAANLSARYISDRFLPDKAIDL 248 Query: 394 IDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKER 453 +DEAAS+I+ +I+S+PEEL+++ ++II + E+ AL E+ S R++ LN EL Sbjct: 249 VDEAASTIKTEINSQPEELEKIQQKIITFETEKAALKSENTIQSNLRVEELNNELKKLNS 308 Query: 454 QYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQL 513 ++ L E+W +EK + K ++E K + + + G + S++ Y +P++EK+L Sbjct: 309 EHKILSEKWISEKNVVIELNDKKRKIESLKHEVSKLQNEGLYEKASKIMYSDLPKIEKEL 368 Query: 514 EAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQ 573 + L + L++ VT+ EIAE++++WT IP+S+++E +++KLL ++ EL +V GQ Sbjct: 369 KILENLNKEKNSLIKEDVTENEIAEIVSKWTMIPISKLLEKQKDKLLNLQSELKKQVKGQ 428 Query: 574 NEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRID 633 EA++ VS+ I RSRA + DPN+PIGSF+F+GPTGVGKTEL K+LA +FDS + ++R+D Sbjct: 429 EEAIELVSDTILRSRANINDPNKPIGSFIFMGPTGVGKTELAKSLAYVLFDSKKQLIRLD 488 Query: 634 MSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQV 693 MSE+ EKHS+S+++G+PPGY+GYE GG LTE +R++PYS++L DE+EKAHPDV N+LLQ+ Sbjct: 489 MSEYSEKHSISKIIGSPPGYIGYENGGQLTELIRQKPYSIVLFDELEKAHPDVLNVLLQI 548 Query: 694 LDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEF 753 LDDG LTD +G+T++F+NT++IMT+NLGSDLI E+ D +++++L V +PEF Sbjct: 549 LDDGILTDAKGKTINFKNTIIIMTTNLGSDLILEKV--YDPKELRKILLKFV----KPEF 602 Query: 754 INRIDEVVVFHPLGEQHIASIAQIQLKRLYKRL-EERGYEIHISDEALKLLSENGYDPVY 812 +NRIDE++ F L + I I + +L L KR+ + + I D ++ +S+ GYD +Y Sbjct: 603 LNRIDEIIPFKELDKDTIKEIIENELNELEKRVYQNQTIFIKFDDSIVEYISKQGYDNLY 662 Query: 813 GARPLKRAIQQQIENPLAQQILSGELVPGK--VIRLEVNEDRIV 854 GARPLKR IQ +I++ +A I+SG L P + +I +E NE+ ++ Sbjct: 663 GARPLKRVIQNKIQSKIALNIISGNLKPNESYIILIE-NENLVI 705 >UniRef50_Q7U3T3 Chaperone protein clpB 2 n=10 Tax=cellular organisms RepID=CLPB2_SYNPX Length = 900 Score = 704 bits (1817), Expect = 0.0, Method: Compositional matrix adjust. Identities = 380/703 (54%), Positives = 507/703 (72%), Gaps = 12/703 (1%) Query: 155 EDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214 E + AL+ Y DLTE AE G LDPVIGRD EIR I+VL RR+KNNPVLIGEPGVGKTA Sbjct: 193 EREPSALEAYGRDLTEEAEAGSLDPVIGRDSEIRNLIKVLSRRSKNNPVLIGEPGVGKTA 252 Query: 215 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 274 I E LAQRI+ GEVP+ L+G R++ALD+GAL+AGAK+RG+FEERL+ VL ++++ + V+ Sbjct: 253 IAELLAQRIVAGEVPDSLQGLRLIALDLGALIAGAKFRGQFEERLRSVLEEVSRSDSGVV 312 Query: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334 LFIDELHT+VG+ ++ + DAG++LKPALARG+L C+GATT +EYR+ +EKD AL RRFQ Sbjct: 313 LFIDELHTVVGSDRS--STDAGSLLKPALARGDLRCIGATTPEEYRRTVEKDPALNRRFQ 370 Query: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394 +V + EP +E ++ ILRGL+ERYELHH V ITD AI A L+ RYI+DR LPDKAIDLI Sbjct: 371 QVLIREPDLELSLEILRGLRERYELHHGVTITDEAIQTANRLADRYISDRCLPDKAIDLI 430 Query: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQ 454 DEAA+ +++++ SKP+ ++ + L+ + AL+ + ++R+ + + L R Sbjct: 431 DEAAAQLKIEVTSKPQVVEEAE---ADLRRVELALLAAEEAPEEERIQLQRQRLEVSSR- 486 Query: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLE 514 +L W+ E+ L + + E + AI +A R G L + LQY ++ ++++ E Sbjct: 487 LDDLRRRWQEERTQLEELGQLLQQDEDLRHAIAEAEREGALEEAARLQYDQLHTVQQRRE 546 Query: 515 A--ATQLEGKT--MRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRV 570 A A+Q E ++ LLR +V +IA+++ARWTGIPV R++ ER KLL +E L RV Sbjct: 547 ALEASQAEAQSAGTALLREQVEAGDIADLVARWTGIPVQRLLAGERRKLLALESHLSERV 606 Query: 571 IGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMV 630 IGQ EAV AV+ AIRR+RAG+ DP RP+GSFLFLGPTGVGKTEL KALA +FD +EA+V Sbjct: 607 IGQVEAVAAVAAAIRRARAGMKDPRRPVGSFLFLGPTGVGKTELAKALATSLFDEEEALV 666 Query: 631 RIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNIL 690 R+DMSEFME+++ +RL+GAPPGYVGYEEGG LTEAVRRRPY+V+LLDEVEKAHPDVFN+L Sbjct: 667 RLDMSEFMERNASARLIGAPPGYVGYEEGGQLTEAVRRRPYAVLLLDEVEKAHPDVFNLL 726 Query: 691 LQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE--RFGELDYAHMKELVLGVVSHN 748 LQVLDDGRLTD QG TVDFR+TVV+MTSNL S +I E R G D A +++ V +S Sbjct: 727 LQVLDDGRLTDSQGLTVDFRHTVVVMTSNLASPVILEHARSGSSDDAQLQQQVDAALSSQ 786 Query: 749 FRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGY 808 FRPEF+NRIDEV+ F PL + + I ++QL L + E+G + + D L+ G+ Sbjct: 787 FRPEFLNRIDEVIRFRPLKVKDLVRIVRLQLADLSTLMAEQGLSLEVDDAVADSLARQGH 846 Query: 809 DPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNED 851 +P YGARPL+R +++Q+ENPLA Q+L IR+ D Sbjct: 847 EPEYGARPLRRVLRRQLENPLATQLLEERFRSAHGIRVRCGTD 889 >UniRef50_P31539 Heat shock protein 104 n=15 Tax=Eukaryota RepID=HS104_YEAST Length = 908 Score = 704 bits (1816), Expect = 0.0, Method: Compositional matrix adjust. Identities = 376/840 (44%), Positives = 556/840 (66%), Gaps = 26/840 (3%) Query: 17 AQSLALGHDNQFIEPLHLMSALL-NQEGGSVSPLLTSAGINAGQLRTD-----INQALNR 70 AQ LA H + ++P+H+++A + E GSV P L + I G+ D +N+ L R Sbjct: 18 AQKLASDHQHPQLQPIHILAAFIETPEDGSV-PYLQNL-IEKGRYDYDLFKKVVNRNLVR 75 Query: 71 LPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAG 130 +PQ + ++ PS L +VL K+ +++ D+FI+ + +L AL + ++ I K A Sbjct: 76 IPQQQPAPAEITPSYALGKVLQDAAKIQKQQKDSFIAQD-HILFALFNDSSIQQIFKEAQ 134 Query: 131 ATTANITQAIEQMRGGESVNDQGAEDQR--QALKKYTIDLTERAEQGKLDPVIGRDEEIR 188 I Q ++RG ++ +GA+ + L KY ID+TE+A QGKLDPVIGR+EEIR Sbjct: 135 VDIEAIKQQALELRGNTRIDSRGADTNTPLEYLSKYAIDMTEQARQGKLDPVIGREEEIR 194 Query: 189 RTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAG 248 TI+VL RR K+NP LIGEPG+GKTAI+EG+AQRII+ +VP L+G ++ +LD+ AL AG Sbjct: 195 STIRVLARRIKSNPCLIGEPGIGKTAIIEGVAQRIIDDDVPTILQGAKLFSLDLAALTAG 254 Query: 249 AKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGEL 308 AKY+G+FEER KGVL ++ + + ++LFIDE+H ++G GK D A N+LKPAL+RG+L Sbjct: 255 AKYKGDFEERFKGVLKEIEESKTLIVLFIDEIHMLMGNGKDDAA----NILKPALSRGQL 310 Query: 309 HCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDP 368 +GATT +EYR +EKD A ERRFQK+ VAEPSV T+AILRGL+ +YE+HH V+I D Sbjct: 311 KVIGATTNNEYRSIVEKDGAFERRFQKIEVAEPSVRQTVAILRGLQPKYEIHHGVRILDS 370 Query: 369 AIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQA 428 A+V AA L+ RY+ R+LPD A+DL+D + + + + DSKPEELD +R++ +++E +A Sbjct: 371 ALVTAAQLAKRYLPYRRLPDSALDLVDISCAGVAVARDSKPEELDSKERQLQLIQVEIKA 430 Query: 429 LMKE--SDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAI 486 L ++ +D +K RL + ++ + + + L + + EK K +L++ + Sbjct: 431 LERDEDADSTTKDRLKLARQKEASLQEELEPLRQRYNEEKHGHEELTQAKKKLDELENKA 490 Query: 487 EQARRVGDLARMSELQYGKIPELEKQLE------AATQLEGKTMRLLRNKVTDAEIAEVL 540 A R D A ++L+Y IP+++KQ+E A + +++N V I+E Sbjct: 491 LDAERRYDTATAADLRYFAIPDIKKQIEKLEDQVAEEERRAGANSMIQNVVDSDTISETA 550 Query: 541 ARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGS 600 AR TGIPV ++ ESE EKL+ ME++L V+GQ +A+ AVSNA+R SR+GLA+P +P S Sbjct: 551 ARLTGIPVKKLSESENEKLIHMERDLSSEVVGQMDAIKAVSNAVRLSRSGLANPRQP-AS 609 Query: 601 FLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG 660 FLFLG +G GKTEL K +A F+F+ ++ M+R+D SE EK++VS+L+G GYVGY+EGG Sbjct: 610 FLFLGLSGSGKTELAKKVAGFLFNDEDMMIRVDCSELSEKYAVSKLLGTTAGYVGYDEGG 669 Query: 661 YLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL 720 +LT ++ +PYSV+L DEVEKAHPDV ++LQ+LDDGR+T GQG+T+D N +VIMTSNL Sbjct: 670 FLTNQLQYKPYSVLLFDEVEKAHPDVLTVMLQMLDDGRITSGQGKTIDCSNCIVIMTSNL 729 Query: 721 GSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLK 780 G++ I + G K LV+G V +FRPEF+NRI +V+F+ L + I I I+LK Sbjct: 730 GAEFINSQQGSKIQESTKNLVMGAVRQHFRPEFLNRISSIVIFNKLSRKAIHKIVDIRLK 789 Query: 781 RLYKRLEE--RGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGEL 838 + +R E+ + Y+++++ EA L++ GY GARPL R IQ +I N LA +IL E+ Sbjct: 790 EIEERFEQNDKHYKLNLTQEAKDFLAKYGYSDDMGARPLNRLIQNEILNKLALRILKNEI 849 >UniRef50_C8NYT7 ATP-dependent Clp protease ATP-binding subunit n=6 Tax=Bacteria RepID=C8NYT7_9CORY Length = 967 Score = 700 bits (1806), Expect = 0.0, Method: Compositional matrix adjust. Identities = 404/899 (44%), Positives = 557/899 (61%), Gaps = 120/899 (13%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +R T++ + + AQ A ++ +I H++ L+ + G + L S GIN +R Sbjct: 2 FERFTDRARRVIVLAQQEARDLNHNYIGTEHILLGLIQEGEGVAAKALESMGINLDDVRR 61 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL-ESRGT 121 ++ + + R Q G V + +VL L + + G +I +E +L + E G Sbjct: 62 EVEEIIGRGSQPHT--GHVPFTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGEGV 119 Query: 122 LADILKAAGATTANITQAIEQM----RGGESVNDQGAEDQRQA----------------- 160 A +L GA + Q + Q+ GGE N + AE Q+ Sbjct: 120 AAQVLIKLGADLPRVRQQVIQLLSGYEGGEGQNPEIAEGQQGGPGLTGAGAGSGSMGGMG 179 Query: 161 ---------------LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLI 205 L ++ +LT A++GKLDPV+GRD+EI R +QVL RRTKNNPVLI Sbjct: 180 SGRGGNQGERSNSLVLDQFGRNLTAAAKEGKLDPVVGRDKEIERIMQVLSRRTKNNPVLI 239 Query: 206 GEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLND 265 GEPGVGKTA+VEGLA I NG+VPE LK ++V +LD+G+LVAG++YRG+FEERLK VL + Sbjct: 240 GEPGVGKTAVVEGLALDIANGKVPETLKDKQVYSLDLGSLVAGSRYRGDFEERLKKVLKE 299 Query: 266 LAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEK 325 + Q G++ILFIDE+HT+VGAG A+GA+DA ++LKP LARGEL +GATTLDEYR++IEK Sbjct: 300 I-NQRGDIILFIDEIHTLVGAGAAEGAIDAASLLKPKLARGELQTIGATTLDEYRKHIEK 358 Query: 326 DAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQ 385 DAALERRFQ V V EPSVE+TI IL+GL++RYE HH V TD A+ AAA LS RYI DR Sbjct: 359 DAALERRFQPVQVDEPSVENTIQILKGLRDRYEAHHRVSYTDDALAAAANLSDRYINDRF 418 Query: 386 LPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESD-EASKKRLDM- 443 LPDKA+DL+DEA + +R++ + P+ L +D RI +++ E++A + D E + D Sbjct: 419 LPDKAVDLLDEAGARMRIKRMTAPKGLRDVDDRITEVRREKEAAIDAQDFEKAAGLRDTE 478 Query: 444 --LNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSEL 501 L EE ++KE+Q W+A ELE D+A + E Sbjct: 479 RKLGEERAEKEKQ-------WRA------------GELE-------------DIAEVGEE 506 Query: 502 QYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLR 561 Q IA+VLA WTGIPV ++ ESE +LL Sbjct: 507 Q---------------------------------IADVLANWTGIPVFKLTESESSRLLH 533 Query: 562 MEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANF 621 ME ELH R+IGQ++AV AVS AIRR+RAGL DP RP GSF+F GP+GVGKTEL KALA F Sbjct: 534 MEDELHQRIIGQDDAVKAVSRAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALAEF 593 Query: 622 MFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEK 681 +F +++++++DM EF ++ + SRL GAPPGYVGYEEGG LTE VRR+P+SV+L DE+EK Sbjct: 594 LFGDEDSLIQVDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEK 653 Query: 682 AHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFG----------- 730 AH +++N LLQVL++G +TDGQGR VDF+NTV+I TSNLG+ I + G Sbjct: 654 AHKEIYNTLLQVLEEGHVTDGQGRNVDFKNTVLIFTSNLGTSDISKAVGLGFSGASTTDS 713 Query: 731 ELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERG 790 + Y MK+ V + +FRPEF+NRIDE+VVFH L ++ I + ++ RL K LE + Sbjct: 714 DAQYERMKQKVHDELKKHFRPEFLNRIDEIVVFHQLTQEQIVEMVELLAGRLAKNLETQD 773 Query: 791 YEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVN 849 I +S++A LL+ G+DPV GARPL+R IQ++IE+ L+++IL GE+ G++I + V Sbjct: 774 MGIELSEDAKNLLAARGFDPVLGARPLRRTIQREIEDVLSEKILFGEIGAGEIIEVGVT 832 >UniRef50_Q1WVA6 Negative regulator of genetic competence n=19 Tax=Bacteria RepID=Q1WVA6_LACS1 Length = 830 Score = 696 bits (1797), Expect = 0.0, Method: Compositional matrix adjust. Identities = 387/872 (44%), Positives = 550/872 (63%), Gaps = 97/872 (11%) Query: 4 DRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTD 63 +R T + L AQ A +Q I HL+ AL ++ G + +L S + +R + Sbjct: 5 ERYTPSAKQVLVLAQQQANYFKHQAIGTEHLLLALTMEKNGVAAKVLQSFVVTEVDVREE 64 Query: 64 INQALNRLPQVEGTGGDVQ-PSQDLVR-VLNLCDKLAQKRGDNFISSELFVLAALESRGT 121 I + ++ G D P R VL + A+ + +E +LA LE T Sbjct: 65 IEHIVG-YGNLQRRGADTYLPYSPRTRYVLERAREHAKLFNVEKVGTEHILLALLEDDKT 123 Query: 122 LADILKAA------------------GATTANITQAIEQMRGGESVNDQGAEDQRQALKK 163 ++ + AA ATTAN T+ +++ E D G L + Sbjct: 124 ISSRILAALNIDLRKVKNITYRTMGVDATTANRTR--KKLALSEKKQDNGT----PTLDE 177 Query: 164 YTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRI 223 DLTE + ++DPV+GRD EI+R +Q+L RRTKNNPVL+GEPGVGKTA+ EG +Q+I Sbjct: 178 LARDLTEMVRKDQIDPVVGRDNEIKRVVQILSRRTKNNPVLLGEPGVGKTAVAEGFSQKI 237 Query: 224 INGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTM 283 +NGEVP+ LK +RV+ LDMG+LVAG KYRGEFE+RLK ++ ++ +++GNVILFIDE+HT+ Sbjct: 238 VNGEVPDNLKNKRVMMLDMGSLVAGTKYRGEFEDRLKKIIEEI-REDGNVILFIDEMHTL 296 Query: 284 VGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSV 343 +GAG A+GA+DA N+LKPALARGE+ +GATTL+EY++Y+E DAALERRF V + EP+ Sbjct: 297 IGAGGAEGAIDASNILKPALARGEVQVIGATTLNEYQKYVEADAALERRFASVTINEPTP 356 Query: 344 EDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRM 403 E + IL+GL+ +YE HH +QITD A+ +A LS RYIA R LPDKAIDL+DEAA+ +R+ Sbjct: 357 EVALTILKGLRPKYEKHHQLQITDEALESAVKLSKRYIASRFLPDKAIDLMDEAAARVRI 416 Query: 404 QIDSKPEELDRLDRRIIQLKLEQ-QALMKESDEASKKRLDMLNEELSDKERQYSELEEEW 462 K +++ + +++ +L E+ +AL+KE E + Sbjct: 417 NNAQKVDKVSAIKKKLSELSQEKTEALLKEDFEKA------------------------- 451 Query: 463 KAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGK 522 AE+ ++ I++ +LEKQ++ E Sbjct: 452 --------------AEIRNEELKIQE-------------------KLEKQIQRDKDEEDS 478 Query: 523 TMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSN 582 R KVT +IAEV++ WTG+PV+++ SE ++L+R+E+ LH+RVIGQ+EAV AVS Sbjct: 479 NN--YRVKVTAEDIAEVVSEWTGVPVTQINRSEGDRLIRLEKILHNRVIGQDEAVKAVSK 536 Query: 583 AIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHS 642 AIRR+R+GL DP RPIGSF+FLGPTGVGKTEL KALA MF S+++M+RIDMSE+MEK++ Sbjct: 537 AIRRARSGLKDPTRPIGSFMFLGPTGVGKTELAKALAEAMFGSEDSMIRIDMSEYMEKYT 596 Query: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702 SRL+G+PPGYVGY+EGG LTE VR PYSV+LLDEVEKAH DVFNILLQVLDDG LTD Sbjct: 597 TSRLIGSPPGYVGYDEGGQLTEKVRNNPYSVVLLDEVEKAHNDVFNILLQVLDDGFLTDS 656 Query: 703 QGRTVDFRNTVVIMTSNLGSDLIQER----FGEL----DYAHMKELVLGVVSHNFRPEFI 754 +GR VDFRNT++IMTSNLG+ +++ FG DY M V + FRPEF+ Sbjct: 657 KGRKVDFRNTIIIMTSNLGATALRDEKSVGFGAKDVSDDYEAMAAKVRETLKKTFRPEFL 716 Query: 755 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 814 NR+DE+VVFH L ++ I I ++ K + R++E+ + I+ A+ +++E G+D YGA Sbjct: 717 NRLDEIVVFHSLNKEEIHQIVKLMAKNIIDRIKEQNINLKITPAAIDIVAEAGFDAEYGA 776 Query: 815 RPLKRAIQQQIENPLAQQILSGELVPGKVIRL 846 RP++R +Q +IE+ L++++L+G + G + + Sbjct: 777 RPIRRILQDKIEDLLSEELLAGNIETGATVTI 808 >UniRef50_A4FF35 Clp protease ATP binding subunit n=7 Tax=Bacteria RepID=A4FF35_SACEN Length = 838 Score = 693 bits (1788), Expect = 0.0, Method: Compositional matrix adjust. Identities = 405/870 (46%), Positives = 544/870 (62%), Gaps = 104/870 (11%) Query: 6 LTNKFQLALADAQSLA--LGHDNQFIEPLHLMSALLNQ-------EGGSVSPLLTSAGIN 56 +T K Q LA A A LGHD+ ++ LH++ A + EG V P T A Sbjct: 41 MTQKTQELLAGAADYARGLGHDD--LDALHVLWAATKEATTREMLEGVQVDPD-TFAETV 97 Query: 57 AGQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL 116 QL +A +R P + G +VL ++A+ G +I E +LA Sbjct: 98 QRQLPA-AREAASRAPALTPAG---------RKVLVDAYQVARALGSTYIGPEHVLLAMS 147 Query: 117 ESRGTLAD-ILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQA---LKKYTIDLTERA 172 S + A +L +AGAT + R E+ Q ++ L KY DLT RA Sbjct: 148 ASPDSEAGRLLASAGATPEEFRVSAGGARRSEAATGQATAERDSGTPTLDKYGQDLTARA 207 Query: 173 EQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGL 232 G+LDPV+GR +EI +TI+VL RRTKNNPVL+GE GVGKTAIVEG+AQRI +G+VP L Sbjct: 208 RDGELDPVVGRADEIEQTIEVLSRRTKNNPVLVGEAGVGKTAIVEGIAQRIADGQVPHVL 267 Query: 233 KGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGA 292 G+R++ LD+ +++AG +YRG+FEER+ V+++++ G VI+FIDELHT+VGAG A+GA Sbjct: 268 TGKRIVQLDLSSMLAGTRYRGDFEERMTKVIDEISANSGEVIVFIDELHTLVGAGGAEGA 327 Query: 293 MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRG 352 +DAGNMLKP LARGELH VGATTLDEYR+ IEKDAALERRFQ V V EPSVEDTI +L Sbjct: 328 VDAGNMLKPRLARGELHVVGATTLDEYRKNIEKDAALERRFQPVQVPEPSVEDTIEVLDR 387 Query: 353 LKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEEL 412 L++RY HH V+ TD A+ AAA LS RYIADR LPDKAIDL+D+A + R+ + Sbjct: 388 LRDRYAEHHRVRYTDEAVAAAARLSDRYIADRFLPDKAIDLLDQAGARKRLSVVGP--SA 445 Query: 413 DRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGT 472 D L++RI +L ++E+ S +E++ E+AS Sbjct: 446 DELEQRIQRL---------------------------EREKDRSVADEDY--ERAS---- 472 Query: 473 QTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVT 532 ++ E+ A+ +E R G +PE VT Sbjct: 473 -ALRDEIGVAQAELEANRDAG------------VPE----------------------VT 497 Query: 533 DAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLA 592 +++IAEV++R TG+PVSR+ E ER +L +E ELH RVIGQ++AV A++ A+RRSR+G+ Sbjct: 498 ESDIAEVVSRATGVPVSRLTEQERTRLRNLEGELHRRVIGQDDAVRALARAVRRSRSGVG 557 Query: 593 DPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPG 652 + NRP+GSFLFLGPTGVGKTEL KALA +F ++ M+R+DMSEF E+H+ +RL+GAPPG Sbjct: 558 NANRPVGSFLFLGPTGVGKTELAKALAETLFGDEDRMIRLDMSEFQERHNAARLIGAPPG 617 Query: 653 YVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNT 712 YVGY E G LTEAVRRRPYSV+LLDEVEKAHPDVFN LLQVL+DGRLTDGQGRTVDF NT Sbjct: 618 YVGYGEAGELTEAVRRRPYSVVLLDEVEKAHPDVFNTLLQVLEDGRLTDGQGRTVDFTNT 677 Query: 713 VVIMTSNLGSDLIQERFGELDYA--------HMKELVLGVVSHNFRPEFINRIDEVVVFH 764 VVIMTSNLGS++I + G L ++ + + ++ + FRPEF+NRIDEVVVF Sbjct: 678 VVIMTSNLGSEVISSKSGGLGFSAAQDEADESLHDRLMPRLKEAFRPEFLNRIDEVVVFR 737 Query: 765 PLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQ 824 L + + IA + L KRL I D A+ L++E G+ P +GARPL+R I++ Sbjct: 738 KLTAEQLHDIADLLLDGTRKRLAAMEIGIGFDDAAVDLIAERGHQPEFGARPLRRTIERD 797 Query: 825 IENPLAQQILSGELVPGKVIRLEVNEDRIV 854 +++ +A +L GEL G + + V + ++ Sbjct: 798 VDDRIADLVLDGELEAGSAVHVGVRDGQLT 827 >UniRef50_Q4L3I4 ATP-dependent Clp protease ATP-binding subunit clpC n=90 Tax=Bacteria RepID=CLPC_STAHJ Length = 824 Score = 690 bits (1781), Expect = 0.0, Method: Compositional matrix adjust. Identities = 398/867 (45%), Positives = 546/867 (62%), Gaps = 84/867 (9%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M RLT + Q LA AQ A+ ++ I HL+ L+ + G + +L S I ++ Sbjct: 1 MLFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKV 60 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL-ESR 119 ++ + + GT + + +V+ L A+K NF+ +E +L + E+ Sbjct: 61 IEEVEKLIGHGQDQTGT---LHYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENE 117 Query: 120 GTLADILKAAGATTANITQAIEQM---RGGESVNDQGAEDQRQ----ALKKYTIDLTERA 172 G A + NIT+A Q+ G ++++ A + L DLT A Sbjct: 118 GVAARVF---ANLDLNITKARAQVVKALGSPEMSNKNATANKSNNTPTLDGLARDLTVIA 174 Query: 173 EQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGL 232 + G LDPV+GRD+EI R I+VL RRTKNNPVLIGEPGVGKTAI EGLAQ I+N EVPE L Sbjct: 175 KDGTLDPVVGRDKEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETL 234 Query: 233 KGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGA 292 KG+RV++LDMG +VAG KYRGEFEERLK V+ ++ Q GNVILFIDELHT+VGAG A+GA Sbjct: 235 KGKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEI-HQAGNVILFIDELHTLVGAGGAEGA 293 Query: 293 MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRG 352 +DA N+LKPALARGEL C+GATTLDEYR+ IEKDAALERRFQ + V EP+VEDTIAIL+G Sbjct: 294 IDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERRFQPIQVDEPTVEDTIAILKG 353 Query: 353 LKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEEL 412 L++RYE H HR I++ DEA ++ +K + Sbjct: 354 LRDRYEAH-----------------HR-----------INISDEA-----LEAAAKLSDC 380 Query: 413 DRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGT 472 DR + K +D+++E S K R S + + Sbjct: 381 YVSDRFL-----------------PDKAIDLIDE-ASSKVRLKSH---------TTPNNL 413 Query: 473 QTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVT 532 + I+ E+E+ K + A + + L+ K +LEKQ E A T ++ Sbjct: 414 KEIEQEIEKVKNEKDAAVHAQEFENAANLR-DKQTKLEKQYEDAKNEWKTTQGDQSTSLS 472 Query: 533 DAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLA 592 +I EV+A WTGIP++++ E+E ++LL +EQ LH RVIGQN+AV ++S A+RR+RAGL Sbjct: 473 KEDIGEVIAGWTGIPLTKINETESDRLLNLEQTLHDRVIGQNDAVTSISKAVRRARAGLK 532 Query: 593 DPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPG 652 DP RPIGSF+FLGPTGVGKTEL +ALA MF ++AM+R+DMSEFMEKH+VSRLVGAPPG Sbjct: 533 DPKRPIGSFIFLGPTGVGKTELARALAESMFGEEDAMIRVDMSEFMEKHAVSRLVGAPPG 592 Query: 653 YVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNT 712 YVG++EGG LTE VRR+PYSVIL DE+EKAHPDVFNILLQVLDDG LTD +GR VDFRNT Sbjct: 593 YVGHDEGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRQVDFRNT 652 Query: 713 VVIMTSNLGSDLIQ-ERFGEL-------DYAHMKELVLGVVSHNFRPEFINRIDEVVVFH 764 V+IMTSN+G+ +Q +RF DY +++ ++ + ++FRPEF+NR+D+++VFH Sbjct: 653 VIIMTSNVGAQELQDQRFAGFGGGSEGHDYETIRKTMMKELKNSFRPEFLNRVDDIIVFH 712 Query: 765 PLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQ 824 L + + I + + +L +RL E+ I ++D+A + ++E GYDP YGARPL RAIQ+ Sbjct: 713 KLSKDELKEIVTMMVNKLTQRLSEQDINIVVTDKAKEKIAEEGYDPEYGARPLIRAIQKT 772 Query: 825 IENPLAQQILSGELVPGKVIRLEVNED 851 +E+ L++ IL G + GK + ++ + D Sbjct: 773 VEDNLSELILDGNQIEGKEVVIDHDGD 799 >UniRef50_Q46HG6 ATPase n=17 Tax=Cyanobacteria RepID=Q46HG6_PROMT Length = 931 Score = 682 bits (1760), Expect = 0.0, Method: Compositional matrix adjust. Identities = 351/705 (49%), Positives = 507/705 (71%), Gaps = 18/705 (2%) Query: 160 ALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGL 219 AL Y DLT AE G LDPVIGR+ EI+ +VL RR KNNPVLIG PGVGKTAI E L Sbjct: 221 ALDLYCKDLTTEAENGTLDPVIGRESEIKAITKVLSRRGKNNPVLIGAPGVGKTAIAELL 280 Query: 220 AQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDE 279 AQ+I++ E+PE L+G R+++LD+GAL+AGAK+RG+FEER + +L+++ E VILFIDE Sbjct: 281 AQKIVDNELPESLQGLRLISLDIGALIAGAKFRGQFEERFRSLLSEINNSEKGVILFIDE 340 Query: 280 LHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVA 339 LHT+V +++ DAG++LKP LA G+L C+GATT D YR+ IEKD AL RRFQ+V + Sbjct: 341 LHTIVSKDRSN--TDAGSLLKPLLASGDLRCIGATTPDNYRRTIEKDLALNRRFQQVSIK 398 Query: 340 EPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAAS 399 EPS++ ++ IL+GLKE YE+HH V ITD A++ A L++RYI+DR LPDKAIDLIDEA++ Sbjct: 399 EPSLDLSLEILKGLKENYEVHHGVIITDEALITANRLAYRYISDRCLPDKAIDLIDEASA 458 Query: 400 SIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELE 459 +R++ KP+ ++ + ++ L + +++ + + + ++ L E+ + +E++ Sbjct: 459 QVRIESALKPKIIEEKESQVNHL---ESSIINADKDTTLETINNLQEKKELLLFELAEIK 515 Query: 460 EEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLE----A 515 ++W+ + + Q +K L++ K I + GD+ + L+Y ++ +L++++E + Sbjct: 516 QKWQDQIDKSAELQELKISLKELKNLIREVEISGDMEEVERLKYDQLYQLQERIEEIEVS 575 Query: 516 ATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNE 575 + LL++KV +IA+V++RWTGIPV +++ ER+KLL++EQ+L +VIGQ Sbjct: 576 IREDNEYGNSLLKDKVNPEDIADVVSRWTGIPVRKVVSGERQKLLKLEQDLGKKVIGQLN 635 Query: 576 AVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMS 635 AV AVS AIRR+RAG+ D RPIGSFLFLGPTGVGKTEL K+LA+ +FD ++A++R+DMS Sbjct: 636 AVQAVSAAIRRARAGMQDIKRPIGSFLFLGPTGVGKTELAKSLASSLFDEEDALLRLDMS 695 Query: 636 EFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLD 695 E+ME+++VSRL+GAPPGYVGYEEGG LTEA+R+RPY+V+LLDE+EKAH +VFNILLQVLD Sbjct: 696 EYMERNAVSRLLGAPPGYVGYEEGGQLTEAIRKRPYAVLLLDEIEKAHQEVFNILLQVLD 755 Query: 696 DGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVL---------GVVS 746 DGRLTD QGRTVDFRNTV++MTSNL S I +L + + +L ++ Sbjct: 756 DGRLTDSQGRTVDFRNTVIVMTSNLASKAILNNSLQLQSENSNKNILLQELDQKINEALT 815 Query: 747 HNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSEN 806 +FRPEF+NRIDEV+ F+PL + I ++QL L K L+ +G ++++ + +K+L+E Sbjct: 816 KHFRPEFLNRIDEVIKFNPLKPDSLEQIVRLQLDELKKLLKHQGLDLYVDENTIKILAEE 875 Query: 807 GYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNED 851 GY+P YGARPL+R I++++ENPLA QIL K IR+E +D Sbjct: 876 GYEPEYGARPLRRVIRRRLENPLATQILEEAFQGAKSIRVETKDD 920 >UniRef50_B5ZBN7 Chaperone protein ClpB n=44 Tax=cellular organisms RepID=B5ZBN7_UREU1 Length = 704 Score = 680 bits (1754), Expect = 0.0, Method: Compositional matrix adjust. Identities = 335/696 (48%), Positives = 484/696 (69%), Gaps = 15/696 (2%) Query: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220 L+++ +L + K+DP+IGRDEEIRRTI++L R+TKNNPVLIGEPGVGKTAIVEGLA Sbjct: 12 LEEFGRNLNQEILDNKIDPIIGRDEEIRRTIEILSRKTKNNPVLIGEPGVGKTAIVEGLA 71 Query: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280 RI++ +VP L + ++ L + +L+AGA Y+G+FEER+ +L ++ K GN+ILFIDE+ Sbjct: 72 YRIVHKDVPSNLLDKTIIELSLSSLIAGASYQGQFEERINAILKEVKKSNGNIILFIDEI 131 Query: 281 HTMVGAGKADGA-MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVA 339 H +VG G+ G+ MD N+LKP +ARGE+ +GATTLDEYR YIEKD ALERRF KV V Sbjct: 132 HQIVGMGRNQGSNMDVANILKPMMARGEIKLIGATTLDEYRLYIEKDQALERRFTKVLVN 191 Query: 340 EPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAAS 399 +P++++T+ I+RGLK R+E H ++I D A++AA LS RYI DR LPDKAIDLIDEAA+ Sbjct: 192 KPTIQETLTIMRGLKPRWEAFHGIKIHDNALIAAVNLSERYINDRNLPDKAIDLIDEAAA 251 Query: 400 SIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELE 459 I+ QI+S+P LD + R + L+ E+ AL E DE S KRL+ + E++ K+ +++ L Sbjct: 252 KIKTQINSQPIYLDEIKRDLQHLQTEKAALESEKDEKSIKRLNDILEKIKLKQDEFNNLN 311 Query: 460 EEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQ---LEAA 516 + + EK + + ++ ++E+ + IE + G + S L Y +P LEKQ LE Sbjct: 312 DIYLKEKKQIDDLKNLRQKIERIQHDIEFYQSEGKYEKASRLLYSDLPALEKQRGELENK 371 Query: 517 TQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEA 576 E + +++ + +T+ EIA+V+AR TGIP++ ++ E+ KLL + + + VIGQ+EA Sbjct: 372 IN-ENSSQKMIVDSLTENEIADVIARATGIPLNHLLADEKTKLLSLNKRIAAHVIGQDEA 430 Query: 577 VDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSE 636 V +S+A+ R RAG+ +PN+PIGSFLFLGPTGVGKTEL K LA +FDS +A++R DMSE Sbjct: 431 VKLISDAVIRGRAGINNPNQPIGSFLFLGPTGVGKTELAKTLAKELFDSQKALIRFDMSE 490 Query: 637 FMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDD 696 +MEKHSVS+LVGAPPGYVGYE G LTE+V+R+PYS++L DE+EKAHPDV NILLQ+LD+ Sbjct: 491 YMEKHSVSKLVGAPPGYVGYENAGLLTESVKRKPYSILLFDEIEKAHPDVLNILLQILDE 550 Query: 697 GRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINR 756 G + D + ++F+NT++IMTSN+G++ + E + K L + F+PE +NR Sbjct: 551 GSVKDAKNNEINFKNTIIIMTSNVGAEALLE--------NNKTNALMELQKTFKPEILNR 602 Query: 757 IDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARP 816 I E++ F+ L ++ I I++ LK L L ++ Y I +D K++ + Y YGARP Sbjct: 603 ISEIIFFNKLSKEVIFKISENLLKELSDLLAKQDYSIKFNDNIAKIMVDEAYSSNYGARP 662 Query: 817 LKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDR 852 LKR I + +EN +A+ I+ + + E+N DR Sbjct: 663 LKRWITKHLENEIAKLIIENRITKNR--NYEINYDR 696 >UniRef50_B5Y8V8 Negative regulator of genetic competence ClpC/mecB n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y8V8_COPPD Length = 805 Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust. Identities = 380/849 (44%), Positives = 545/849 (64%), Gaps = 77/849 (9%) Query: 5 RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDI 64 R + + + AL DAQ A ++ F+ HL+ A+LN++ + S ++ S G +A +R+ I Sbjct: 4 RFSEEARKALKDAQEEARRLNSSFVGREHLVLAMLNEDTRAYS-IIDSLGADADNIRSSI 62 Query: 65 NQALNRLPQVEGTGGDV-QPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLA 123 +P + + S + R+L++ + A+K +++ +E +LA L+ ++ Sbjct: 63 ED----IPMPMASSLQYPELSSEARRLLDIASEEARKLAHSYVGTEHLLLAILKEPSRVS 118 Query: 124 DILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGR 183 IL G ++ + + +M GE ++ + + L K++ DL AE+GKLDPVIGR Sbjct: 119 SILNENGVFYDDVRKKVIEM--GEQEPEEKGKTKTPVLDKFSKDLVSLAEKGKLDPVIGR 176 Query: 184 DEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMG 243 + E+ R I++L RR KNNP+L+GEPGVGKTAIVEGLA+RI +G+VP LK +RV+ LD+ Sbjct: 177 ETELNRIIEILSRRIKNNPILLGEPGVGKTAIVEGLAERIASGKVPYSLKKKRVVQLDIS 236 Query: 244 ALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPAL 303 ++VAG KYRGEFEER+K +L+++ + G VILFIDE+HT++GAG A+GA+DA ++LKP+L Sbjct: 237 SIVAGTKYRGEFEERMKKILDEVKRTNGQVILFIDEIHTVIGAGAAEGAIDAASILKPSL 296 Query: 304 ARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHV 363 ARGE+ +GATT D+YR+YIE+D A ERRFQ V V EPS+E+T IL GL+ YE H+V Sbjct: 297 ARGEIKVIGATTYDDYRKYIERDPAFERRFQPVQVEEPSLEETKQILIGLRPIYEKFHNV 356 Query: 364 QITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLK 423 +I D AI AAA L+ +Y+ R LPDKAID +DE + +R+ + P L L I ++ Sbjct: 357 KIADDAIEAAAILTKKYVKQRFLPDKAIDALDETCAKVRLANEVLPSNLRALLDEIENVR 416 Query: 424 LEQQALM--KESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQ 481 L++Q + ++ +EA+ L DKE+ L+EE+ Sbjct: 417 LQKQLAIDSQQFEEAAA---------LRDKEKA---LKEEY------------------- 445 Query: 482 AKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLA 541 +RM E+ L ++M + V+ ++A ++ Sbjct: 446 --------------SRMEEIW----------------LYERSMDENQPTVSFDDVAYTIS 475 Query: 542 RWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSF 601 WTGIPV+++ +++KLL +E LH R++GQNEAV AV+ AIRRSR GL D RPIG F Sbjct: 476 SWTGIPVAKLRLDDKKKLLEIEDYLHRRIVGQNEAVTAVAKAIRRSRTGLQDDRRPIGVF 535 Query: 602 LFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGY 661 LFLGPTGVGKTEL +ALA FMF +EA++RIDMSE+MEK +VSRLVGAPPGYVGYEEGG Sbjct: 536 LFLGPTGVGKTELARALAEFMFGEEEALIRIDMSEYMEKFNVSRLVGAPPGYVGYEEGGQ 595 Query: 662 LTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLG 721 LTEAVRR+P+S++LLDE+EKAHPDVF+ILLQ+ +DGRLTDGQGR VDFRNT++IMTSNLG Sbjct: 596 LTEAVRRKPHSIVLLDEIEKAHPDVFDILLQIFEDGRLTDGQGRVVDFRNTIIIMTSNLG 655 Query: 722 SDLIQ--ERFG----ELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIA 775 S I G ++ + +M+ LV+ V F+PEF+NRIDE+VVFH L + I Sbjct: 656 SRDISAGTTIGFLKDQVKFENMENLVMDAVKKFFKPEFLNRIDEIVVFHHLTNDDLRQIV 715 Query: 776 QIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILS 835 I + L K+L + + ISD L + GY+P +GARPL+RAIQ+ +++PLA+ +L Sbjct: 716 GIMMDELNKQLRSQNLTVKISDRMLDQIITEGYEPRFGARPLRRAIQRLVKDPLAEYMLK 775 Query: 836 GELVPGKVI 844 E + G + Sbjct: 776 HENISGTLF 784 >UniRef50_C1MLM7 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MLM7_9CHLO Length = 886 Score = 676 bits (1744), Expect = 0.0, Method: Compositional matrix adjust. Identities = 351/743 (47%), Positives = 503/743 (67%), Gaps = 63/743 (8%) Query: 155 EDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214 +++ AL+++ D+TE A+QG LDP++GRD+E+RR + +L RRTKNNP+L+G PGVGKTA Sbjct: 108 DEELSALERFCTDVTEEAKQGVLDPLVGRDDEVRRLVHILCRRTKNNPILLGRPGVGKTA 167 Query: 215 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDL--AKQEGN 272 IVEGLAQRI+ G+VP L G R+L LD+GA+ AG + GEFEERL V++++ A Q+G Sbjct: 168 IVEGLAQRIVAGDVPTSLLGARLLELDLGAVGAGCQMPGEFEERLSIVVSEVVEASQKGG 227 Query: 273 VILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERR 332 +I+FID++H + G + +LKPAL RG L C+GA+T++++++ IE+DAALERR Sbjct: 228 IIMFIDDIHNL--CPPPPGGNNGAAILKPALGRGLLKCIGASTVEKFKKSIEQDAALERR 285 Query: 333 FQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAID 392 FQ+V VAEP + T+++LRGL+ RYE HH ++I + A+VAAA L+ RY+ R LPDKAID Sbjct: 286 FQQVPVAEPDIAQTVSVLRGLRPRYETHHSIKIHESAVVAAAKLASRYVQGRCLPDKAID 345 Query: 393 LIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKR----------LD 442 L+DEAA+++RMQ KPE+LD +DR++ QL E+ + E K L Sbjct: 346 LLDEAAAAVRMQKSLKPEDLDVVDRKMSQLCKERDQIKARLIEDMHKHGSGGKMAASCLH 405 Query: 443 MLNEEL----SDKERQYSELEEEWKAEK------ASLSGTQ------------------- 473 LNEEL + +++ +LE+E KA + A LS ++ Sbjct: 406 ELNEELVRERTKQQKLLRDLEKEKKASREYKRATAELSFSERRLVNAHEKQRQAADNVKK 465 Query: 474 -TI----------KAELEQAKIAIEQARRVGDLARMSELQYGKI-----PELEKQLEAAT 517 T+ +AE+ +AK A +A + LA L +I E K E Sbjct: 466 VTVALQRAQDTDNQAEVLEAKAAATRAEQDAKLADKETLHLSEIIARAKVECTKAEEEIM 525 Query: 518 QLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAV 577 + + +++VTD +IA V++RWTG+PV++++ SE+ KLL+++ ELH RVIGQ+ AV Sbjct: 526 SISEGNGLMTKDEVTDVDIATVVSRWTGVPVAKLVASEKAKLLQLDAELHQRVIGQDHAV 585 Query: 578 DAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEF 637 +V+ A++RSRA L+DPN P+ SF+FLGPTGVGKTEL KALAN++F+SD A++R+DMSE+ Sbjct: 586 TSVAEAVQRSRADLSDPNGPVASFMFLGPTGVGKTELAKALANYLFNSDNALIRLDMSEY 645 Query: 638 MEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDG 697 MEKHSV+RL+GAPPGY+GY+EGG LT+AVR++PYS++L DE+EKAH DVFN+LLQ+LD+G Sbjct: 646 MEKHSVARLIGAPPGYIGYDEGGMLTDAVRQKPYSIVLFDEIEKAHVDVFNVLLQLLDEG 705 Query: 698 RLTDGQGRTVDFRNTVVIMTSNLGSDLI----QERFGELDYAHMKELVLGVVSHNFRPEF 753 +TD QGRTV FRN ++IMTSNLGSD I + R G MK+ V+ V +FRPEF Sbjct: 706 HVTDTQGRTVSFRNCLIIMTSNLGSDEIAFGDRGRRGRRGPGEMKDKVMAHVRAHFRPEF 765 Query: 754 INRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYG 813 INR+DE +VF PL I I Q+Q +L +R+E + ++ + A+ L+ G+DP YG Sbjct: 766 INRLDEFIVFEPLSHSQIMEIVQLQCNKLVERVEGQRMKLDLQPSAIDYLARKGFDPTYG 825 Query: 814 ARPLKRAIQQQIENPLAQQILSG 836 ARP+KRAIQ ++ +A ++L G Sbjct: 826 ARPVKRAIQSELIQNMANKLLRG 848 >UniRef50_A4RQJ1 Chaperone, Hsp100 family, ClpB-type n=2 Tax=Ostreococcus RepID=A4RQJ1_OSTLU Length = 807 Score = 676 bits (1744), Expect = 0.0, Method: Compositional matrix adjust. Identities = 348/718 (48%), Positives = 508/718 (70%), Gaps = 36/718 (5%) Query: 152 QGAEDQR-QALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGV 210 Q ED+ AL+++ D+T+ A +G LDP++GR+EE+RR I +L RRTKNNPVL+G+ GV Sbjct: 49 QNPEDEELSALERFCTDVTDEARRGLLDPLVGREEEVRRLIHILCRRTKNNPVLLGQSGV 108 Query: 211 GKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDL--AK 268 GKTAIVEGLAQRI+N +VP+ L+G ++L +D+GA+ AG + GEFEERL ++ ++ A Sbjct: 109 GKTAIVEGLAQRIVNDDVPQALRGAKLLEVDLGAVGAGCQMPGEFEERLTIIVQEVVDAT 168 Query: 269 QEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAA 328 +G V+LFID++H + A + + +LKPAL RG L CVGAT+ D++++ IE+DAA Sbjct: 169 AKGPVVLFIDDIHNLCPAPPMNN--NGAAILKPALGRGLLRCVGATSADKFKKTIEQDAA 226 Query: 329 LERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPD 388 LERRFQ+V V EP+V+DT++ILRGL+ RYE HH++ I++ A++AAA LS RY++ RQLPD Sbjct: 227 LERRFQQVPVEEPNVDDTVSILRGLRPRYEQHHNIAISEGALLAAAQLSARYVSGRQLPD 286 Query: 389 KAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKE---------SDEASKK 439 KAIDL+DEAA+++RM KP+ LD DR+I QL+ E+ L+++ + + Sbjct: 287 KAIDLLDEAAAAVRMMKTHKPDGLDMADRKIAQLQKERDQLLRKNAGELAKAGTSNVAAA 346 Query: 440 RLDMLNEELSDKERQYSELEEEWKAEKA-------SLSGTQTIKAELEQAKIAIEQARRV 492 L + LS +++ E++ ++ E+ + + IK ++E AK+ I QA + Sbjct: 347 ELQKIAAALSVEKKARKEMQSKYDTERRIQDEYRRAYANNSFIKRKVENAKMKIAQATQA 406 Query: 493 --GDL--ARMSELQYGKIPELEKQLEAA----TQLEGKTMRL------LRNKVTDAEIAE 538 G + A + Q ++ +LE+Q++ T E + L +R +VTD ++A Sbjct: 407 EAGSVLAAELGRAQ-AELKKLEQQVKTTEDELTAAEAAVLELKDGGAMMREEVTDNDVAA 465 Query: 539 VLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPI 598 V++RWTG+PV++++ SE+ KLL++E ELH RVIGQ AV +V+ A++RSRA LADPN P+ Sbjct: 466 VVSRWTGVPVAKLVSSEKAKLLQLEAELHQRVIGQEAAVTSVAEAVQRSRADLADPNGPV 525 Query: 599 GSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEE 658 SF+FLGPTGVGKTEL KALA+++F+SD A+VR+DMSE+MEKHSV+RL+GAPPGYVGY+E Sbjct: 526 ASFMFLGPTGVGKTELAKALASYLFNSDTALVRLDMSEYMEKHSVARLIGAPPGYVGYDE 585 Query: 659 GGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTS 718 GG LT+AVR++PYSV+L DE+EKAH DVFN+LLQ+LD+G +TD QGR V FRN ++IMTS Sbjct: 586 GGMLTDAVRQKPYSVVLFDEIEKAHVDVFNVLLQLLDEGHVTDTQGRNVSFRNCLIIMTS 645 Query: 719 NLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQ 778 NLGSD I + ++K+ V+ V +FRPEF+NR+DE +VF PL I I Q+Q Sbjct: 646 NLGSDEISYANKRRNKVNVKDAVMQHVRSHFRPEFVNRLDEFIVFEPLTHAQIEEIVQLQ 705 Query: 779 LKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSG 836 K+L +R++ + + + A++ L+ GYDP YGARP++RAIQ+++ PLA +L G Sbjct: 706 TKKLSQRIDTQRMNLSLDRSAIEHLARQGYDPAYGARPVRRAIQRELIQPLANAMLRG 763 >UniRef50_C5NWX3 Negative regulator of genetic competence ClpC/MecB n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NWX3_9BACL Length = 824 Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust. Identities = 346/743 (46%), Positives = 492/743 (66%), Gaps = 77/743 (10%) Query: 122 LADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVI 181 L D++K A + + + +++ E+ + + + L DLT A KLDPV+ Sbjct: 145 LFDLVKKNHALVSKLYEGFKKITESEN-----SSSKTKTLNSLAKDLTRDAFNNKLDPVL 199 Query: 182 GRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALD 241 RD+EI R I++L RRTKNNPVLIGEPGVGKTAIVEGLA+RI++ VP L G+RV+ LD Sbjct: 200 ARDKEITRMIEILNRRTKNNPVLIGEPGVGKTAIVEGLAERIVSQNVPSNLLGKRVMVLD 259 Query: 242 MGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKP 301 MG L+AG KYRGEFEERLK ++ ++ + G++ILFIDE+HT++GAG ++G+ DA N+LKP Sbjct: 260 MGTLLAGTKYRGEFEERLKNIIAEI-EDAGDIILFIDEIHTIIGAGGSEGSADASNILKP 318 Query: 302 ALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHH 361 AL+RG + C+GATT +EYR+Y EKDAALERRFQ + V EPS ED+I IL GL+ +YE HH Sbjct: 319 ALSRGLIQCIGATTTEEYRKYFEKDAALERRFQPIKVEEPSTEDSIKILEGLRHKYEEHH 378 Query: 362 HVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQ 421 V+I D AI +A LS YI DR LPDKAIDLIDEA S ++++ P++L + + + Sbjct: 379 DVEILDEAICSAVKLSTTYITDRCLPDKAIDLIDEACSKVKLRYYKSPDKLKEYEDELTR 438 Query: 422 LKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQ 481 L KE D A ++N+E ++ E+ + + +++E+ Sbjct: 439 LN-------KEKDRA------VINQEFEIAAKKRDEVNK--------------VISKIEE 471 Query: 482 AKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLA 541 KI+ + + L KI K+T IAEVLA Sbjct: 472 FKISWQDS-----------LSKDKI-----------------------KITSEHIAEVLA 497 Query: 542 RWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSF 601 WTG+PV+++ ESE E+LL++E+ LH RVIGQ+EAV +++ A+RR+R+G PNRPIGSF Sbjct: 498 AWTGVPVTKLTESESERLLKLEEILHKRVIGQDEAVVSLAKAVRRARSGFKAPNRPIGSF 557 Query: 602 LFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGY 661 +FLGPTGVGKTEL K+L+ +F S++ M+RIDMSE+ME HS+SRLVGAPPGYVGYEE G Sbjct: 558 IFLGPTGVGKTELAKSLSEALFSSEDNMIRIDMSEYMEPHSISRLVGAPPGYVGYEEVGQ 617 Query: 662 LTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLG 721 L+E VR++PYSV+L DE+EKAHP +FNILLQVLDDGRLTD GR +DF+NT++IMTSN+G Sbjct: 618 LSEQVRQKPYSVVLFDEIEKAHPSIFNILLQVLDDGRLTDASGRVIDFKNTIIIMTSNVG 677 Query: 722 -SDLIQERFGEL--------DYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIA 772 S+L ++F DY +++ ++ + +RPEF+NRID+++VF L ++ + Sbjct: 678 VSELNDQKFVGFGGSDSIKNDYKNVQNTMMEALKKQYRPEFLNRIDDIIVFKTLEKEELE 737 Query: 773 SIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQ 832 I+++ + L KRLE+R I ++ +A+ + E+G YGARPLKR+IQ+ IE+ L+++ Sbjct: 738 KISELLIDGLSKRLEDRNITIKLTKKAMAKIVEDGSIKEYGARPLKRSIQKNIEDLLSEE 797 Query: 833 ILSGELVPGKVIRLEVNEDRIVA 855 +L + G I ++ +D V Sbjct: 798 LLQNPELTG-TINIDYKKDSFVV 819 >UniRef50_Q8EW28 Chaperone protein clpB n=2 Tax=Bacteria RepID=CLPB_MYCPE Length = 705 Score = 673 bits (1737), Expect = 0.0, Method: Compositional matrix adjust. Identities = 323/687 (47%), Positives = 486/687 (70%), Gaps = 13/687 (1%) Query: 156 DQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAI 215 +++ LKKY+ +L E KL+ +IGR++EIRR I++L R+ KNNPVLIGEPGVGKTAI Sbjct: 9 NEKDILKKYSRNLNEEVSANKLNKIIGREQEIRRVIEILSRKEKNNPVLIGEPGVGKTAI 68 Query: 216 VEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVIL 275 VEG Q+II+ EVPE L V +++ +L+AG +GEFE+RL ++ + + G VIL Sbjct: 69 VEGFVQKIISKEVPENLVHCVVYEVNLSSLIAGTFLQGEFEKRLNALIKEAKQNNGAVIL 128 Query: 276 FIDELHTMVGAGKA--DGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRF 333 FIDE+H ++G GKA + MDA N+LKP +ARGE+ +GATT +EYRQYIEKD ALERRF Sbjct: 129 FIDEIHQLMGMGKAGNNSGMDAANILKPIMARGEIKIIGATTSNEYRQYIEKDGALERRF 188 Query: 334 QKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDL 393 QK+ V EP+ E+ + I+RGLKE++E++H V+I D A+VA+ LS RYI+D+ LPDKAIDL Sbjct: 189 QKILVEEPTPEEALTIMRGLKEKWEIYHKVRIQDNALVASVKLSERYISDKYLPDKAIDL 248 Query: 394 IDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKER 453 IDEAA+ I+ + + P E ++++I L+ E+ AL KE K+R++ + EL ++ Sbjct: 249 IDEAAAKIKTEAHTSPSE--PINKKIFYLETEKIALSKEEGTNQKERINEIEIELEKLKQ 306 Query: 454 QYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQL 513 + +E+EWK +K IK E+E+ +E+ + G+ S++ Y +PEL+K+L Sbjct: 307 ERDLVEKEWKEQKEQQVALNKIKKEIEKNNWDVERYQNQGEYTEASKILYSVLPELKKKL 366 Query: 514 EAATQLEGKTMR-LLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIG 572 EA + + + L+++ +++ ++AE+++R T IP++++ E E++KLL + L RV G Sbjct: 367 EAIEKSISENKKVLIKDYISEIDVAEIISRITKIPLNKIFEKEQDKLLNLFNNLKKRVKG 426 Query: 573 QNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRI 632 Q+EA+ VS+ + ++R G+ +PNRPIGSFLF+GPTGVGKTE+ K+LA +F++++A+VRI Sbjct: 427 QDEALKLVSDTVLKNRVGINNPNRPIGSFLFVGPTGVGKTEVAKSLAENLFNTEKAIVRI 486 Query: 633 DMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQ 692 +MSE+MEKHS+SRL+GAPPGY+GYE+ G L+E +RR+PYSV+LLDE+EKAHPD+ N+LLQ Sbjct: 487 NMSEYMEKHSISRLIGAPPGYIGYEQAGELSEQIRRKPYSVVLLDEIEKAHPDILNVLLQ 546 Query: 693 VLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPE 752 VLD+G L D QGR ++F+NT++IMTSN+G+ + E ++ +K +F+PE Sbjct: 547 VLDEGTLKDNQGRNINFKNTIIIMTSNVGALYLMENKEDMFERELK--------TSFKPE 598 Query: 753 FINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVY 812 F+NRIDE++ F+ + + IAQ L L KRL++ Y+I ++ +++NGY Y Sbjct: 599 FLNRIDEIIKFNSITMEFAKEIAQKMLDDLEKRLKDNNYQITFDKSVVEYVAKNGYSKEY 658 Query: 813 GARPLKRAIQQQIENPLAQQILSGELV 839 GARP+ R IQ+ IEN + + IL EL+ Sbjct: 659 GARPINRFIQKTIENFITESILKNELI 685 >UniRef50_Q7NAZ3 Chaperone protein clpB n=5 Tax=Mollicutes RepID=CLPB_MYCGA Length = 717 Score = 667 bits (1721), Expect = 0.0, Method: Compositional matrix adjust. Identities = 327/694 (47%), Positives = 484/694 (69%), Gaps = 15/694 (2%) Query: 156 DQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAI 215 +++ L KY+ +L + + +DP IGR+EEIRR I++L R+ KNNPVLIGEPGVGKTAI Sbjct: 9 EEKNVLSKYSRNLNDEIARNAIDPTIGREEEIRRLIEILSRKNKNNPVLIGEPGVGKTAI 68 Query: 216 VEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVIL 275 VEG A++I+NG+VP+ LK V+ L + +L+AG +++G FEERL +L ++ G VIL Sbjct: 69 VEGFARKIVNGDVPDNLKDVEVVELSLSSLIAGTQFQGSFEERLNKILKEVKNSSGKVIL 128 Query: 276 FIDELHTMVGAGK--ADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRF 333 FIDE+H +VG GK ++ AMDA N+LKP +ARGE+ +GATT+DEYR+YIEKD ALERR Sbjct: 129 FIDEIHQLVGMGKNSSNSAMDAANILKPMMARGEIKVIGATTIDEYRKYIEKDGALERRM 188 Query: 334 QKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDL 393 QK+ V EP+ ++ + I+RGL+ER+E H V+I D A+VAA +S RYI+DR LPDKAIDL Sbjct: 189 QKILVDEPTKQEALTIMRGLRERWEAFHKVRIFDDALVAAVEMSARYISDRYLPDKAIDL 248 Query: 394 IDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK----RLDMLNEELS 449 IDEAA+ I+ I S P ELD + ++II L E AL +E E R++ L +E+ Sbjct: 249 IDEAAAKIKTLIHSLPPELDNIKQKIIHLSTELAALEREKKENHSNVRLGRIEQLKKEIK 308 Query: 450 DKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPEL 509 D + +EL +W +K +K E+ IE+ + G+ + S+L Y +IP+ Sbjct: 309 DFTNKQNELTVKWTQQKTIYECINKLKEEVTNLTAEIERLQAKGEYTQASKLLYLEIPKR 368 Query: 510 EKQLEAAT-QLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHH 568 ++++E T +L T L++ ++ EIAEV+++ T IP+S+++ SE++KLL ++ +L Sbjct: 369 QEEIEKKTKELSEFTDNLIKTSISRVEIAEVISQATKIPLSKLVASEQQKLLNLKNDLSK 428 Query: 569 RVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEA 628 + GQ+ A+ VS+A+ R RA + DPNRPIGSFLFLGPTGVGKTE+ K LA +FD+++A Sbjct: 429 YIKGQDHAIKNVSDAVLRGRAQINDPNRPIGSFLFLGPTGVGKTEVAKKLAYCLFDNEKA 488 Query: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688 MVRIDMSEFME+HSV +L+G+PPGY+GY++ G L++A+R +PY+V+L DE+EKAHPDV N Sbjct: 489 MVRIDMSEFMERHSVDKLIGSPPGYIGYDQPGVLSDAIRTKPYAVVLFDEIEKAHPDVLN 548 Query: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHN 748 ILLQ+LDDG+LTD R V+F+NT++IMTSN+G++ I A+ + + Sbjct: 549 ILLQILDDGQLTDNHNRLVNFKNTIIIMTSNIGAEHI--------LANNPAKTIEELKRK 600 Query: 749 FRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGY 808 RPE +NRIDE++ F L ++ +++IAQ L L R++++ I + ++ + ++G Sbjct: 601 IRPELLNRIDELITFKALNDKDLSAIAQKLLSDLSDRIKKQQINITFDKKIVENVVKHGS 660 Query: 809 DPVYGARPLKRAIQQQIENPLAQQILSGELVPGK 842 + V+GARPLKR IQ+++EN LA++I+ +L K Sbjct: 661 NTVFGARPLKRYIQREVENFLAKKIIENKLEKNK 694 >UniRef50_Q8DTC7 Chaperone protein clpB n=2 Tax=Streptococcus mutans RepID=CLPB_STRMU Length = 860 Score = 665 bits (1717), Expect = 0.0, Method: Compositional matrix adjust. Identities = 363/848 (42%), Positives = 546/848 (64%), Gaps = 25/848 (2%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +D++T + +L +A+ LA+ H N ++ HL + L+ + + S IN QL Sbjct: 2 IDKMTQLVEDSLEEAKELAIAHRNYQLDIPHLWAVLVKPDQFAFQ-FYQSLEINTNQLIE 60 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKR---GDNFISSELFVLAAL-ES 118 IN+ ++++P + T R+ NL D Q+ D ++ E +LA + Sbjct: 61 IINKEIDKIPVLSSTEKSSYARLYSQRLKNLLDDAHQEMIDLKDQVLTVEHLILALFNQQ 120 Query: 119 RGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLD 178 R + L G + Q + ++R G+ E AL+KY ++L +RA ++ Sbjct: 121 RNPITVFLLEQGLNKEKLYQKMHRIRKGKPAISSSQETIYDALEKYAVNLNQRALDEPVN 180 Query: 179 PVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVL 238 +IGR +E+ I++L R+ KNN VL+G GVGKTAI+EG QR++ +VP+ L+G+ + Sbjct: 181 KIIGRQDEMNDIIRILSRKNKNNAVLVGHSGVGKTAIIEGFVQRLVKNQVPKNLQGKVIY 240 Query: 239 ALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNM 298 +LD+GAL+AG KYRGEFEER K +LND+ G +ILFIDE+H++V AG+ +G++DA ++ Sbjct: 241 SLDIGALLAGTKYRGEFEERFKALLNDIIDSNGQIILFIDEIHSIVSAGRTEGSVDAASI 300 Query: 299 LKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYE 358 LKP LARG++ +G+TT EYR+ IE D ALERRFQ++ V EP ++ T+ IL+GLK YE Sbjct: 301 LKPLLARGKIRIIGSTTHAEYRESIEYDRALERRFQRILVHEPDLDYTMEILKGLKPIYE 360 Query: 359 LHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418 H V++ + + AAA+LS RYI+DR LPDKA+DLIDEA ++ R+ + P ++ L ++ Sbjct: 361 NFHGVRLEEDGLEAAASLSKRYISDRFLPDKALDLIDEACAAKRLASHAYPVQMTNLSQQ 420 Query: 419 IIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAE 478 +I K+ L++ +D + + LN L E Q S+L W+ E+ L Q +++ Sbjct: 421 LISEKIR---LLRLTDSDTDDKFK-LNNHLEQLEEQKSQLLANWQRERELLDQVQELRSH 476 Query: 479 L----EQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGK---TMRLLRNKV 531 L EQA +A+E +V D R+ + E+ K + T LE + + +++ V Sbjct: 477 LTALEEQANLALEN-NQVADYVRLED------EEIRKCHQKMTALEKERLDSQKIINVTV 529 Query: 532 TDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGL 591 T +IA V+ R TGI V +ME+ER++LL +E+ LH +++GQ++AV VS AI RSRAG+ Sbjct: 530 TREDIAAVVERLTGIKVQGVMENERDRLLHLEELLHQKIVGQDQAVQKVSQAIIRSRAGI 589 Query: 592 ADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPP 651 +P RPIGSFLFLGPTGVGKT L K LA +F S+ MVR+DMSE+MEKH+VSRLVG PP Sbjct: 590 QNPKRPIGSFLFLGPTGVGKTALAKRLAEVLFGSELEMVRLDMSEYMEKHAVSRLVGPPP 649 Query: 652 GYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRN 711 GYVGYEEGG LTEAVR+R YS++LLDE+EKAHPDVFN LLQVLD+GRLTD +GRT+DF+N Sbjct: 650 GYVGYEEGGQLTEAVRQRLYSIVLLDEIEKAHPDVFNTLLQVLDEGRLTDSKGRTIDFKN 709 Query: 712 TVVIMTSNLGSDLIQERFGE--LDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQ 769 T++IMTSN+GS I + + + ++ VL ++H+FRPEF+NRIDE V+F+ L E+ Sbjct: 710 TILIMTSNIGSTNILQSLQDSGCITSEVRYKVLDELNHSFRPEFLNRIDETVLFNALSEK 769 Query: 770 HIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPL 829 + + ++ + L RL E+ + +++ LL++ G+D +GARP++R I Q++ENPL Sbjct: 770 DMTGVVKVMVSDLQARLLEQDIHLTLTESVYILLAKEGFDAAFGARPMQRTIMQKLENPL 829 Query: 830 AQQILSGE 837 A ++ + Sbjct: 830 ALYLIQNQ 837 >UniRef50_A6X7G2 ATPase AAA-2 domain protein n=64 Tax=cellular organisms RepID=A6X7G2_OCHA4 Length = 964 Score = 665 bits (1715), Expect = 0.0, Method: Compositional matrix adjust. Identities = 383/863 (44%), Positives = 540/863 (62%), Gaps = 86/863 (9%) Query: 4 DRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTD 63 DRL+ + L DA A ++ HL+ AL + + V +L ++ LR Sbjct: 116 DRLSEQGNKLLQDAAQKAGEFGRSEVDTEHLLLALTSSD--VVKTILEQFKVDVDDLRRQ 173 Query: 64 INQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSE-LFVLAALESRGTL 122 I + R T G++ S L LN + + G +++ E L + A E G Sbjct: 174 IEKEAKRGDA--KTDGEIGVSPRLKDALNRAFIASNELGHSYVGPEHLLIGLAEEGEGLA 231 Query: 123 ADILKAAGATTANITQAIEQMRGGESVNDQGAEDQR-------QALKKYTIDLTERAEQG 175 A +L+ G T + Q + ++ G +GAE+ R L +++ DLT+ A +G Sbjct: 232 AAMLRKLGLTPQALRQQVTKVVG------KGAEEGRVETPSNTPDLDQFSRDLTKLAREG 285 Query: 176 KLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGR 235 KLDPVIGR EI TI+VL RR KNNPVLIGEPGVGKTAIVEGLAQRI+ GEVPE L+ + Sbjct: 286 KLDPVIGRAREIETTIEVLARRKKNNPVLIGEPGVGKTAIVEGLAQRIVAGEVPEALRDK 345 Query: 236 RVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGA--M 293 R++ L++ ++VAG+KYRGEFEER++ +L ++ +++ ++ILFIDE+HT+VGAG+ G + Sbjct: 346 RLVELNINSMVAGSKYRGEFEERVQKILKEITEEKDSLILFIDEMHTIVGAGQGGGEGGL 405 Query: 294 DAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGL 353 D N KPALARGEL+ +GATTL+EY++YIEKDAALERRFQ V+V EP+V TI ILRGL Sbjct: 406 DIANTFKPALARGELNLIGATTLNEYQKYIEKDAALERRFQPVYVDEPTVAQTIMILRGL 465 Query: 354 KERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELD 413 ++ E HH V ITD AI+AAA LS RYI R +PDKAIDLID+AA+ +++ ++P ++ Sbjct: 466 RDTLESHHKVTITDEAIIAAAELSDRYITGRFMPDKAIDLIDQAAARVKISATARPVDVQ 525 Query: 414 RLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQ 473 L+ + Q+K EQ A++K+ D E Sbjct: 526 ELEAEVAQIKREQDYA------AARKQFDRAAE--------------------------- 552 Query: 474 TIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTD 533 +K ELEQ + +++ + E+ K+ +A+ E V Sbjct: 553 -LKKELEQKQKELDE-----------------LLEIWKRDQASATAE----------VRA 584 Query: 534 AEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLAD 593 +A+++++ TG+PV+ + E++KLL++E++LH RVIGQ EA+ AV++A+R +RAGL + Sbjct: 585 DHVAQIVSKITGVPVTELTTEEKDKLLKLEEKLHERVIGQEEAIRAVADAVRLARAGLRE 644 Query: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGY 653 P +FLFLGPTGVGKTEL K LA +F +A++RIDMSE+ E+HSV+RLVGAPPGY Sbjct: 645 GRGPTATFLFLGPTGVGKTELAKTLAEVIFGDQDAIIRIDMSEYGERHSVARLVGAPPGY 704 Query: 654 VGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTV 713 VGY+EGG LTE VRRRPYSV+LLDE+EKAHPDV+NILLQV DDGRLTDG+GR VDF NT+ Sbjct: 705 VGYDEGGQLTEKVRRRPYSVVLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTI 764 Query: 714 VIMTSNLGSDLIQERF-----GELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGE 768 +I TSNLGSD+IQ E D A K ++ V+ +FRPEFINRIDE++VFH L + Sbjct: 765 IIATSNLGSDIIQRNLTKRGSSEFDEAKQKSELMEVLRGHFRPEFINRIDEIIVFHSLNQ 824 Query: 769 QHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENP 828 I I ++QL R+ + +G E+ + + G+ P +GAR L+R I+ Q+E Sbjct: 825 SEIRQIVELQLNRVKRTALTQGVELELDVSVVDHFGAVGFRPEFGARELRRLIRSQLETE 884 Query: 829 LAQQILSGELVPGKVIRLEVNED 851 LA+++LSG + G +R+ +ED Sbjct: 885 LAREMLSGRIEDGDKVRVAWSED 907 >UniRef50_C7RFB8 ATPase AAA-2 domain protein n=5 Tax=Clostridiales Family XI. Incertae Sedis RepID=C7RFB8_ANAPD Length = 814 Score = 664 bits (1714), Expect = 0.0, Method: Compositional matrix adjust. Identities = 376/876 (42%), Positives = 543/876 (61%), Gaps = 111/876 (12%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 RL+RLT++ A +S +L HD +I HL+ AL+ + G + L +G N R Sbjct: 5 RLNRLTSQ-----ARRESYSLNHD--YIGSEHLLLALM-KTGSLANKALEKSGANYDLFR 56 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLVR----VLNLCDKLAQKRGDNFISSELFVLAALE 117 + + +N + G G +P+ + + + ++A R + ++ E + A + Sbjct: 57 SIV---INNI----GRGNSQRPATEFSKKVRMIFEKSREIAMARKSSVVNEEDILQALIN 109 Query: 118 SRGTLADIL--------KAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLT 169 + +++ K G ++ + + + +G S + + KYT DL Sbjct: 110 DDDSFTNLMFLLSGLDKKVIGKNLDDMLKEVYKTKGSSSKFSEN-------VTKYTNDLN 162 Query: 170 ERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVP 229 E AE GK+DPVIGRD EI R +Q+L RR KNNP+LIG PGVGKTAI EGLAQRI+ +VP Sbjct: 163 ELAESGKIDPVIGRDTEIERLVQILMRRRKNNPILIGAPGVGKTAIAEGLAQRIVAKDVP 222 Query: 230 EGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKA 289 + +K +R+L+LD+ +++AG+KYRG+FE+RLK + ++ K++ +VILFIDE H ++GAG + Sbjct: 223 KIIKDKRILSLDLASMIAGSKYRGDFEDRLKKLFEEIGKRD-DVILFIDEFHMVLGAGAS 281 Query: 290 DGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAI 349 +G+MDA N+LKP LA+GE+ +GATT++EYR+++EKD+AL RR Q + V EPS+ED I Sbjct: 282 EGSMDAANILKPILAKGEIQIMGATTIEEYRKHVEKDSALSRRMQPIQVDEPSLEDARKI 341 Query: 350 LRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKP 409 ++GLK++YE HH V+ITD AI AA LS RYI+DR LPDKAIDLIDEA+S IR+ Sbjct: 342 IQGLKDKYEDHHGVEITDEAIEAAVDLSDRYISDRYLPDKAIDLIDEASSKIRIA----- 396 Query: 410 EELDRLDRRIIQLKLEQQALMKESDEA-SKKRLDMLNEELSDKERQYSELEEEWKAEKAS 468 A KE D A S+ +L+ LN+E Sbjct: 397 ------------------AFQKEDDSAPSEDKLEKLNKEK-------------------- 418 Query: 469 LSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTM-RLL 527 EQA R D R +EL+ KI + + LE + E + RL Sbjct: 419 ------------------EQAVRDQDFERAAELR-DKINQAKFDLEIEKEKEKENKDRLF 459 Query: 528 RNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRS 587 ++ +IA V+A W+ +PV ++ E E EK ++++L VIGQ +A+D+V+ +I+R+ Sbjct: 460 ---ISYDDIASVVANWSKVPVEKLTEDEMEKYANLDEDLKLSVIGQKDAIDSVARSIKRA 516 Query: 588 RAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLV 647 R GL DP +PIGSF+F+GPTGVGKT L K LA +F S++ ++R+DMSE+MEK +VSRLV Sbjct: 517 RVGLKDPKKPIGSFIFVGPTGVGKTYLAKTLAQNLFGSEDKLIRMDMSEYMEKFAVSRLV 576 Query: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTV 707 G+PPGYVGYEEGG LTEAVR PYSVIL DE+EKAHPDVFN+LLQ+LDDGRLTDGQGRTV Sbjct: 577 GSPPGYVGYEEGGQLTEAVRTNPYSVILFDEIEKAHPDVFNLLLQILDDGRLTDGQGRTV 636 Query: 708 DFRNTVVIMTSNLG------SDLIQERFG---ELDYAHMKELVLGVVSHNFRPEFINRID 758 DF+NT++IMTSN+G S I G E + E++ + +F PEF+NR+D Sbjct: 637 DFKNTIIIMTSNIGVRSLSTSKSIGFELGDQKEAEEERTSEIIEKAIKDSFAPEFLNRLD 696 Query: 759 EVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLK 818 +V++F PLGE I I+ + L++ +RL E +I + +KLL++ G+DP YGARPL+ Sbjct: 697 QVIMFKPLGEAEIGEISGLMLEKTRQRLNEIDLDIVYDQKVVKLLAKEGFDPEYGARPLE 756 Query: 819 RAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIV 854 R I + I++ LA+ IL G+L + IR+ V +D +V Sbjct: 757 RHITKMIDDRLAEDILDGKLKRDETIRISVRKDSLV 792 >UniRef50_A1STR4 Chaperone endopeptidase Clp ATP-binding chain B,ClpB n=3 Tax=Gammaproteobacteria RepID=A1STR4_PSYIN Length = 828 Score = 662 bits (1709), Expect = 0.0, Method: Compositional matrix adjust. Identities = 364/782 (46%), Positives = 496/782 (63%), Gaps = 74/782 (9%) Query: 84 SQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL-ESRGTLADILKAAGATTANITQAIEQ 142 SQ++V V + A+ GD++I + LA + G +ADIL G QA++ Sbjct: 101 SQEIVEVFRVAYDEAKDFGDDYIGTGTLFLAFFHKDAGHVADILNNEGIRVDQARQALKH 160 Query: 143 MRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNP 202 +R G +N Q AE + L YT DLTE A +G+LDPVIGR+EEI IQ L RR KNNP Sbjct: 161 IRRGHQLNSQDAEGKPDILDIYTKDLTEMARKGELDPVIGREEEIELIIQTLSRRKKNNP 220 Query: 203 VLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGV 262 LIGEPGVGKT IVEGLAQRI+ +VP+ +R+LALDMG LVAGA RGEFEERLK V Sbjct: 221 ALIGEPGVGKTVIVEGLAQRIVAADVPDSQLNKRLLALDMGELVAGASMRGEFEERLKSV 280 Query: 263 LNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQY 322 + + + G VILFIDELHT+VGA G +DA ++LK ALA+G L +GA TLDEY++Y Sbjct: 281 RDAVIEAGGKVILFIDELHTVVGANAGSGGIDAPSLLKTALAQGTLQVIGADTLDEYQKY 340 Query: 323 IEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIA 382 IE D ALERRF + V EPS+E+TIAIL+G RYE HH + PA AAA LS RYIA Sbjct: 341 IETDKALERRFHPILVREPSIEETIAILQGAAPRYEKHHDIHYALPAFEAAARLSERYIA 400 Query: 383 DRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLD 442 DR LPDKA+D L+ E+ RL Sbjct: 401 DRCLPDKAVD------------------------------------LIDEAGARKHLRLT 424 Query: 443 MLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELE--QAKIAIEQARRVGDLARMSE 500 + + L D ER++ L + + + Q ++E ++ +++AR S+ Sbjct: 425 AIPQNLRDLERKHQGLLRDKTGAFNAQNFEQVAATQMEILKSDQKLKEAR--------SD 476 Query: 501 LQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLL 560 Q G+ E VT +IAEV+ARWTGIPV+RM+ESE EKL Sbjct: 477 WQQGRAKE-------------------DAMVTSDDIAEVVARWTGIPVARMVESESEKLA 517 Query: 561 RMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALAN 620 RME++LH R++GQ +AV AV++AIRR+RAG+ + RPIGSFLFLGPTGVGKTEL +ALA Sbjct: 518 RMEEKLHQRIVGQEDAVRAVADAIRRNRAGITNSRRPIGSFLFLGPTGVGKTELARALAA 577 Query: 621 FMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVE 680 F+ D + ++R+DMSE+ME+H VS+++GAPPGY+GY EGG LTE VR PY+V+LLDE+E Sbjct: 578 FLLDDETRIIRLDMSEYMERHEVSKMIGAPPGYIGYGEGGQLTERVRHNPYTVVLLDEME 637 Query: 681 KAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE--------RFGEL 732 KAHPDVFN+LLQ+L+DG+LTD +GR V FRNTV+I TSNLG+ + L Sbjct: 638 KAHPDVFNMLLQILEDGQLTDAKGRKVSFRNTVIIGTSNLGTGSLSPDKRPIGFIHSDSL 697 Query: 733 DYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYE 792 +Y ++LV+ V F+PEF+NR+D+++VFH L ++H+ IAQ+ + L +R++ RG Sbjct: 698 NYKETQDLVMHEVKKFFKPEFLNRLDDIIVFHYLEKEHVRQIAQMFVAELVERMKLRGIV 757 Query: 793 IHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDR 852 + + + + LS +G+DP+YGARPL+R +++QIEN LA +++ E V+++++ + Sbjct: 758 LEVDNAVIDKLSADGFDPIYGARPLRREVERQIENVLAMKVVRNEFSDNSVVQVKMQDKE 817 Query: 853 IV 854 IV Sbjct: 818 IV 819 >UniRef50_Q4AAM9 ATP-dependent protease binding protein n=7 Tax=Mycoplasma RepID=Q4AAM9_MYCHJ Length = 692 Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust. Identities = 325/697 (46%), Positives = 485/697 (69%), Gaps = 19/697 (2%) Query: 159 QALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEG 218 + L+KY +LT+ A++ K++PVIGRD+EIRR I++L R+TKNNPVL+G+PGVGKTAIVEG Sbjct: 6 ENLEKYARNLTKLAKENKIEPVIGRDDEIRRIIKILSRKTKNNPVLVGDPGVGKTAIVEG 65 Query: 219 LAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFID 278 +A +II +VP+ LK +++ LD+ ++AGA ++GEFE+R+K +L ++ + VI+FID Sbjct: 66 MALKIIANQVPDNLKNKQIFELDLTLILAGASFKGEFEKRIKAILQEIEQNSDQVIIFID 125 Query: 279 ELHTMVGAGKA-DGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVF 337 E+H ++G G + +MD N+LKP +ARG++ +GATT EYR YIEKD ALERR QKV Sbjct: 126 EIHLLIGTGSSGTDSMDFANILKPIMARGQIKLIGATTNSEYRLYIEKDGALERRMQKVE 185 Query: 338 VAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEA 397 + EPSV DTI ILRG+KER E H V+I D A+V A ++RYI DR LPDKAIDL+DEA Sbjct: 186 ILEPSVIDTINILRGIKERLENFHQVKIKDSALVFATKAANRYIFDRFLPDKAIDLVDEA 245 Query: 398 ASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSE 457 A+S++++I+ +PE+L++ R +I LK+E+ K+ + K +++ L E + + Sbjct: 246 AASLKVEINYQPEKLEKAKRELIYLKMEEINSQKQDNSELKSKIENL-------ENEVKK 298 Query: 458 LEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAAT 517 L+++W K S S ++ ELE+ K GD + +E++YGKIP++ K+L Sbjct: 299 LQDQWDQSKKSASEIASLSQELEKLKYQQNYLMEQGDYQKAAEIKYGKIPKISKKLG--- 355 Query: 518 QLEGKTMRL-LRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEA 576 E K R + N + +++IA+V++ WT IP+ +++ESE +K L +E+ L + GQN+A Sbjct: 356 --EIKARRQEISNVLDESQIAKVVSNWTKIPIEKLLESEIQKYLNLEKNLAKSLKGQNQA 413 Query: 577 VDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSE 636 + AVS+AI R +A + D +RPI SF F+GPTGVGKTEL +ALA +F++ ++R+DMSE Sbjct: 414 IKAVSDAILRFKAKINDESRPISSFFFMGPTGVGKTELARALALNLFNNKNQIIRLDMSE 473 Query: 637 FMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDD 696 +MEKHSVS+L+GAPPGY+G+E+GG LT VR PYS+ILLDE+EKAHP+V NI LQ+LD+ Sbjct: 474 YMEKHSVSKLIGAPPGYIGFEQGGNLTNKVRLNPYSIILLDEIEKAHPEVINIFLQILDN 533 Query: 697 GRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINR 756 G + D + + V+FRNT++IMTSN+G++ I E + KEL+ +PEF+NR Sbjct: 534 GEIVDSKSQKVNFRNTIIIMTSNIGANKILEGKKMNEIEAKKELL-----RYLKPEFLNR 588 Query: 757 IDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARP 816 IDE++VF+PL I I +++LK L RL+E +EI + E GYD +GARP Sbjct: 589 IDEIIVFNPLNYDIIFEIIELELKDLQNRLKENNFEIEFEKSVKNWILEFGYDKNFGARP 648 Query: 817 LKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRI 853 +KR I+++IEN +A++I++ E++ K L D++ Sbjct: 649 IKRFIKKEIENFVAKKIVAEEILKDKKYNLSFKNDKL 685 >UniRef50_Q53N47 ATP-dependent Clp protease ATP-binding subunit clpA CD4B,chloroplast, putative, expressed n=5 Tax=cellular organisms RepID=Q53N47_ORYSJ Length = 918 Score = 660 bits (1704), Expect = 0.0, Method: Compositional matrix adjust. Identities = 345/692 (49%), Positives = 471/692 (68%), Gaps = 71/692 (10%) Query: 160 ALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGL 219 L +Y +LT+ AE+GKLDPV+GR ++I +Q+L RRTKNNP LIGEPGVGKTAI EGL Sbjct: 265 TLMEYGTNLTKLAEEGKLDPVVGRQKQIDHVVQILSRRTKNNPCLIGEPGVGKTAIAEGL 324 Query: 220 AQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDE 279 AQ I G+VPE ++ + V++LDMG L+AG KYRGE EERLK +L ++ KQ G +ILF+DE Sbjct: 325 AQLIATGDVPETIQQKTVISLDMGLLLAGTKYRGELEERLKNILEEI-KQNGEIILFLDE 383 Query: 280 LHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVA 339 +HT+V AG A+GA+DA N+ KPALARGEL C+GATT++EYR++IEKDAALERRFQ V + Sbjct: 384 VHTLVTAGSAEGAIDAANIFKPALARGELQCIGATTINEYRKHIEKDAALERRFQPVKIP 443 Query: 340 EPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAAS 399 E +V++T+ IL+GL+ERY+ HH VQ TD A+VAAA LSH++I DR LPDKAIDL+DEA S Sbjct: 444 ESTVDETVGILKGLRERYQGHHKVQYTDEALVAAAELSHKHIRDRFLPDKAIDLMDEAGS 503 Query: 400 SIRMQ-IDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSEL 458 +R++ KP +++ L+ E + +KE ++A Sbjct: 504 IVRLRNAQCKP------SKKVNDLEAELKKTLKEKNDA---------------------- 535 Query: 459 EEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQ 518 I+I+ RR L R ELQ L + A T Sbjct: 536 -------------------------ISIQNFRRAKQL-RDHELQ------LRTNISALTD 563 Query: 519 LEGKTMR---LLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNE 575 + + M + VT+ ++ ++RWTG+P+ ++ E KLL++E+ LH RV+GQ E Sbjct: 564 KKTQMMEPDAIAMPVVTEDDVRHAISRWTGVPLHKVSMDESRKLLKLEEALHRRVVGQGE 623 Query: 576 AVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDE----AMVR 631 AV AVS AIRR+R GL P RP+ S +F GPTGVGK+EL KALA + + S E AMVR Sbjct: 624 AVAAVSRAIRRARLGLKHPGRPVASLVFAGPTGVGKSELAKALAAYYYGSSESEEAAMVR 683 Query: 632 IDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILL 691 +DMSE+MEKH+V+RLVG+PPGYV + EGG LTEAVRRRP++V+LLDEVEKAH DVF++LL Sbjct: 684 LDMSEYMEKHAVARLVGSPPGYVWHGEGGQLTEAVRRRPHAVVLLDEVEKAHRDVFDLLL 743 Query: 692 QVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLI--QERFGELDYAHMKELVLGVVSHNF 749 QVLDDGRLTDG+GRTVDF+NT+++MT+N+GS LI G +K V + +F Sbjct: 744 QVLDDGRLTDGKGRTVDFKNTLIVMTTNIGSSLIVNNGGDGAAAAGRIKNTVTDEMKRHF 803 Query: 750 RPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYD 809 RPEF+NR+DEV++F PL E + IA I L+ R+ E+G ++ ++D+ +L+ E G+D Sbjct: 804 RPEFLNRLDEVIMFQPLTELEVGKIAGIMLEEFAGRVREKGIKLKVTDKFRELVVEEGFD 863 Query: 810 PVYGARPLKRAIQQQIENPLAQQILSGELVPG 841 P YGARPL+RA+ + +E+ LA+++L+GE+ G Sbjct: 864 PSYGARPLRRAVVRLLEDTLAEKMLAGEVREG 895 >UniRef50_A8Q6N1 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8Q6N1_MALGO Length = 853 Score = 659 bits (1701), Expect = 0.0, Method: Compositional matrix adjust. Identities = 374/853 (43%), Positives = 524/853 (61%), Gaps = 73/853 (8%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVS--------------PLLT 51 T++ Q +LA A LA + + + P H+ ALLN + + + + Sbjct: 6 FTDRAQNSLAAAFQLAKDYAHAQLAPSHIALALLNDDTSNSTGVQSTNKDSQSLFKSICE 65 Query: 52 SAGINAGQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELF 111 G++ L + AL ++PQ DV + +++ + ++ D FI+ + Sbjct: 66 KTGVSVPDLENKLRAALRKIPQQSPAPDDVSLTGAASKIMKNAQQYKTQQRDAFIAQDHV 125 Query: 112 VLAALESRGTLADILKAAGATTANITQ-AIEQMRGGESVNDQGAEDQRQALKKYTIDLTE 170 +LA LE ++ ++LK AG ++ + AI Q RGG ++ + AE A+ KY DLT Sbjct: 126 LLALLED-SSINNMLKEAGLANPDLMKNAITQARGGRHIDSKTAEAGYDAMGKYCTDLTA 184 Query: 171 RAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPE 230 A +GKLDPVIGRD EIRR ++VL RRTKNN VLIG PGVGKTA+VEGLAQR+I+ +VP Sbjct: 185 LAAEGKLDPVIGRDNEIRRVVRVLSRRTKNNAVLIGSPGVGKTAVVEGLAQRVIDRDVPP 244 Query: 231 GLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGN---VILFIDELHTMVGAG 287 L G+ + +LDMG L+AGAKY+GE+EER+K VL+D+ K + ILFIDE+H M+ Sbjct: 245 NLLGK-IYSLDMGGLMAGAKYKGEYEERVKAVLSDIEKMTNDGTPCILFIDEMHLMMAGK 303 Query: 288 KADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTI 347 D MDA N+LKP LARG+L C+GATTL+EYRQ IEKDAALERRFQ+V V EP+VEDTI Sbjct: 304 GGDTGMDAANLLKPMLARGKLRCIGATTLNEYRQSIEKDAALERRFQQVIVEEPTVEDTI 363 Query: 348 AILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDS 407 AILRGL+E+YE+HH V+I D A+V+AA L+ RY+ R+LPD AIDL+DE+ + + + ++ Sbjct: 364 AILRGLREKYEVHHGVRILDAAVVSAAQLAKRYLTARKLPDSAIDLVDESCADVTVSRET 423 Query: 408 KPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKA 467 PE +D L+RR ++L++ AL +E D SK+RL+ +EL+ + + + ++ E++A++A Sbjct: 424 VPEAIDTLERRKVRLQIAMTALEREKDPQSKERLEETRQELAHLDDELAPMKAEFEAQRA 483 Query: 468 SLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLL 527 ++ ++E+ + A R DL S+L Y IP+LEK+ A QL+ + + Sbjct: 484 KGDELNNVRRKIEELRAKASDAERRYDLETASDLMYYAIPDLEKR---AEQLQEQARK-- 538 Query: 528 RNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRS 587 +EA S A + Sbjct: 539 ----------------------------------------------DEAEGKTSQANTVT 552 Query: 588 RAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLV 647 +A NRPI SFLF GP+G GKT + K LA++MFD +AMVRID SE+ EKHS+SRL+ Sbjct: 553 SENIASINRPIASFLFCGPSGTGKTLMSKTLASYMFDDPDAMVRIDASEYSEKHSISRLI 612 Query: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTV 707 GAPPGYVG++EGG LTEAVRRRP+S++L+DE+EKA + + LQVLD+GRL D QGR V Sbjct: 613 GAPPGYVGFDEGGVLTEAVRRRPFSIVLIDEIEKAAREFVQLFLQVLDEGRLQDSQGRLV 672 Query: 708 DFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLG 767 FRNT++IMTSNLGS I E E +++LV G +S +F PEFINRID +V F LG Sbjct: 673 SFRNTIIIMTSNLGSSFINESEDEDLTESVRQLVQGAISAHFPPEFINRIDSIVTFRKLG 732 Query: 768 EQHIASIAQIQLKRLYKRLEERGYE--IHISDEALKLLSENGYDPVYGARPLKRAIQQQI 825 + I I++K L KRL E G + + + +EA L GY P GARPL RAIQ Q+ Sbjct: 733 RVDVRRIVDIRIKELQKRLIENGRQSRLVVDEEAKDWLGSIGYSPTMGARPLGRAIQDQL 792 Query: 826 ENPLAQQILSGEL 838 NPL+ IL G++ Sbjct: 793 LNPLSMLILRGQI 805 >UniRef50_Q046D3 ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones n=59 Tax=Firmicutes RepID=Q046D3_LACGA Length = 838 Score = 658 bits (1698), Expect = 0.0, Method: Compositional matrix adjust. Identities = 372/870 (42%), Positives = 538/870 (61%), Gaps = 88/870 (10%) Query: 4 DRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTD 63 D N ++A AQ+ ++ I H++ AL+ + G LL + +R + Sbjct: 23 DSAKNVLEIAKEQAQNF----HHRIIGTEHVLLALVIEANGDAGKLLRERNVTPTLVREE 78 Query: 64 INQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLA 123 I + + T ++ P LV LN + + + G I ++ +L L S LA Sbjct: 79 IERYTGYGSSPKATYMEMSPRLSLV--LNFAKQKSDELGTPQIETKHILLGLLASDQILA 136 Query: 124 D-ILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQA------------LKKYTIDLTE 170 ILK G +++Q I +S D A L K +++L + Sbjct: 137 SLILKNIGVEPRDLSQDINDSFMDDSGEANNIFDVSSATRTKKGKSLTPNLDKVSVNLNK 196 Query: 171 RAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPE 230 RA +G +DPVIGRD+EI+R IQ+L RRTKNNPVL+GEPGVGKTA+ +G+A I+N EVP+ Sbjct: 197 RAREGAIDPVIGRDKEIKRVIQILSRRTKNNPVLVGEPGVGKTAVAQGIASAIVNREVPD 256 Query: 231 GLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKAD 290 L +RV+ALDMG+L+AG KYRGEFE+R+K +L ++ +++G+VILF+DE+HT++GAG A+ Sbjct: 257 NLAKKRVMALDMGSLIAGTKYRGEFEDRMKKILKEI-QRDGSVILFVDEMHTLIGAGGAE 315 Query: 291 GAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAIL 350 GA+DA N+LKP+LARG++ +GATT DEY++YIEKD AL RRFQ+V + EPS E+T+ IL Sbjct: 316 GAIDASNILKPSLARGDIQMIGATTFDEYQKYIEKDQALARRFQQVKIGEPSKEETVDIL 375 Query: 351 RGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPE 410 +GL+ +YE H+V+I D AI A S RYIA+R LPDKAIDLIDEA++++++ Sbjct: 376 KGLRPKYEKFHNVKIEDEAIKDAVEFSTRYIANRFLPDKAIDLIDEASAAVKI------- 428 Query: 411 ELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLS 470 QA+ K + RL L+ +++D Q E E +A Sbjct: 429 ----------------QAVGK-----ADPRLTKLDTQINDVIHQKEEAAENQNFVQA--- 464 Query: 471 GTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNK 530 AK+ E+ + D ++ ++E K + ++ Sbjct: 465 -----------AKLRDEENKLTQDRDKL-----------------IARVENKNSK--KSI 494 Query: 531 VTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590 V +IA++++ WTG+PV+RM +SE ++L +E LH RVIGQ++A+ AVS AIRRSR+G Sbjct: 495 VDSNKIAQIVSEWTGVPVTRMKKSETKRLAHLESILHERVIGQDKAISAVSRAIRRSRSG 554 Query: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAP 650 + D NRPIGSFLFLGPTGVGKTEL KALA +F S+ ++R+DMSE+M++ + S+L+G+ Sbjct: 555 IKDENRPIGSFLFLGPTGVGKTELAKALAAAVFGSERNIIRVDMSEYMDQVATSKLIGSA 614 Query: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFR 710 PGYVGYEEGG L+E VRR PYSVILLDEVEKAHPDVFN+LLQVLD+G LTD +GR VDFR Sbjct: 615 PGYVGYEEGGQLSERVRRNPYSVILLDEVEKAHPDVFNLLLQVLDEGFLTDSKGRKVDFR 674 Query: 711 NTVVIMTSNLGSDLIQER----FG---ELDYAHMKELVLGVVSHNFRPEFINRIDEVVVF 763 NT++IMTSNLGS +QE F E +E V V FRPEF+NRIDE VVF Sbjct: 675 NTIIIMTSNLGSRSLQEDKTVGFAADNEDKNKLQQEKVTAAVKQFFRPEFLNRIDETVVF 734 Query: 764 HPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQ 823 L ++ + I + L RL + + IS AL +L+++G+DP GARPL+RAIQ Sbjct: 735 DSLTKKQLREIVSLMTSHLISRLARKEVTLKISPAALDVLAKDGFDPEMGARPLRRAIQH 794 Query: 824 QIENPLAQQILSGELVPGKVIRLEVNEDRI 853 ++E+ +A+ ++S ++ G+ +++ ++ ++ Sbjct: 795 ELEDVIAEDLISEKIKAGQTVKVGAHQGKL 824 >UniRef50_Q2S2Z0 ATP-dependent Clp protease, ATPase subunit n=63 Tax=Bacteria RepID=Q2S2Z0_SALRD Length = 875 Score = 654 bits (1687), Expect = 0.0, Method: Compositional matrix adjust. Identities = 345/697 (49%), Positives = 470/697 (67%), Gaps = 78/697 (11%) Query: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220 L + DLTE AE+ +LDP+IGR+EEI+R Q+L RR KNNPVLIGEPGVGKTAI EGLA Sbjct: 181 LDNFGRDLTELAEEDELDPIIGREEEIKRVAQILSRRKKNNPVLIGEPGVGKTAIAEGLA 240 Query: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280 RI++ +V L +R++ LD+ +LVAG KYRG+FEER+K V+ +L + ++ILFIDE+ Sbjct: 241 ARIVDRKVSRVLYDKRIVTLDLASLVAGTKYRGQFEERMKAVMKELEDND-DIILFIDEI 299 Query: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340 HT+VGAG A G++DA NM KPALARG+L C+GATTLDEYRQ IE D AL+RRFQK+ V Sbjct: 300 HTIVGAGGASGSLDASNMFKPALARGDLQCIGATTLDEYRQNIEGDGALDRRFQKIIVDP 359 Query: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400 + E+T+ IL +K YE HH+V+ ++ AI A LS RYI DR LPDKAID++DEA + Sbjct: 360 STPEETVNILSNIKSYYEDHHNVRFSEEAIDLAVQLSDRYITDRFLPDKAIDVMDEAGAR 419 Query: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKES--DEASKKRLDMLNEELSDKERQYSEL 458 + + P E+ L+ +I ++ E+ ++K +EA++ L DKE+ Sbjct: 420 VHLSNIEVPPEILELEEQIEDVQEEKNQVVKSQRFEEAAR---------LRDKEK----- 465 Query: 459 EEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQ 518 T++ ELE+AK + +A T+ Sbjct: 466 ---------------TLQEELEEAKQQWHE-------------------------QAETE 485 Query: 519 LEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVD 578 + + VT EIAEV+A TGIPV ++ E E++KLL+ME+ L V+GQ+EA++ Sbjct: 486 V---------HDVTSEEIAEVVAMMTGIPVDKISEPEQQKLLKMEESLKEHVVGQDEAIE 536 Query: 579 AVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFM 638 +S AIRR+RAGL DP +PIGSF+FLGPTGVGKTEL K L ++FDS E+++RIDMSE+M Sbjct: 537 KLSKAIRRTRAGLKDPEKPIGSFIFLGPTGVGKTELAKVLTEYLFDSQESLIRIDMSEYM 596 Query: 639 EKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGR 698 EK SVSRLVGAPPGYVG+EEGG LTE VRR+PYSV+LLDE+EKAHPDV NILLQVLDDG Sbjct: 597 EKFSVSRLVGAPPGYVGHEEGGQLTEKVRRKPYSVVLLDEIEKAHPDVSNILLQVLDDGI 656 Query: 699 LTDGQGRTVDFRNTVVIMTSNLGSDLIQERFG-----------ELDYAHMKELVLGVVSH 747 LTDG GR VDFRNT++IMTSN+G+ I+ FG ++DY MK V + + Sbjct: 657 LTDGMGREVDFRNTILIMTSNIGTQDIK-SFGQGIGFDQTDGEDMDYTSMKSTVQDALKN 715 Query: 748 NFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENG 807 F PEF+NR+D+V+VF+PL +++I I I + L++R EE G ++ + A + L++ G Sbjct: 716 VFNPEFLNRLDDVIVFNPLNKENIFDIIDIMSEDLFERAEELGLDLEFDEAAKEFLTDRG 775 Query: 808 YDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVI 844 +D YGARPL+RA+Q+ +++P+A+ IL E+ G + Sbjct: 776 FDQKYGARPLRRALQKYVQDPMAEDILHDEITEGDTV 812 >UniRef50_A9FG71 ATPase with chaperone activity, two ATP-binding domains n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FG71_SORC5 Length = 871 Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust. Identities = 370/867 (42%), Positives = 541/867 (62%), Gaps = 20/867 (2%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 + LDR T + +A AQ +A + + PLHL+ LL ++ G VS + AG + ++ Sbjct: 8 IHLDRYTGDAKQVVAGAQQIADERQHAEVTPLHLLMRLLERDRG-VSEVFRRAGADPNEV 66 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQK-RGDNFISSELFVLAALESR 119 AL +L + G+ G S L+ +L ++ A + + N L A E R Sbjct: 67 LQLAENALKKLSRA-GSSGVAYVSPRLLDLLGRAEREATRDKSQNVGIEHLLHALAQEIR 125 Query: 120 GTLADILKAAGATTANITQ---AIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGK 176 G +IL + G A+E S A + Q YT DL A +G+ Sbjct: 126 GPAGEILSSFGIGPGAFRPHLGALEAASREPSPAPANAAEPGQP-APYTRDLVADAREGR 184 Query: 177 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRR 236 DPVIGRD E RR +Q+L+RR KN+P+++GEPGVGKTA++ GLA RI +G+VP L G Sbjct: 185 FDPVIGRDVEARRLLQILERRFKNHPLIVGEPGVGKTALIRGLADRIAHGDVPTNLAGAH 244 Query: 237 VLALDMGALVAGAKYRGEFEERLKGVLNDL-AKQEGNVILFIDELHTMVGAGKADGAMDA 295 + LD GALVAGAK RGE E+RLK +++ L +Q+ IL +++L + G G Sbjct: 245 LYELDTGALVAGAKLRGEIEQRLKVLVDRLRGEQDAESILVVEDLDALFGQGVQ--GAGV 302 Query: 296 GNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKE 355 G +LKP L+RGE+ + TT + R+ E+D + RRF + + PS++ ILRG+ Sbjct: 303 GELLKPLLSRGEIRIIATTTPEGVRKINERDPGIIRRFSTITLEAPSIDQATEILRGIAT 362 Query: 356 RYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRL 415 +YE HH V++ + AI +A L+ RYI+DR LPD A+DL+DE ++ R+++D P ELD L Sbjct: 363 KYEAHHRVRVGESAITSAVALAKRYISDRALPDTAVDLLDETSARKRVEVDGVPAELDTL 422 Query: 416 DRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTI 475 RR+ L+ + AL + D+ S + L EL++ E + S + + + ++ Q I Sbjct: 423 TRRVDALRAQIAALADDDDKLSVQTRTRLEAELAEIEPKASSMRSRNASRRGVIAACQAI 482 Query: 476 KAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAA---TQLEGKTMRLLRNKVT 532 + EL A A++ A+R A++ EL++ +PE+ ++L+AA Q EG + N V Sbjct: 483 RRELVAATEALKAAQRDKAFAKIGELEHVTLPEIRRRLQAAEEAAQREG--VAPTSNVVA 540 Query: 533 DAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLA 592 ++++A L WTGIPV++M+E E EKLL+ME L RV+GQ+EAV A++ A+RR R GL Sbjct: 541 ESDVAATLNDWTGIPVAKMLEGEAEKLLKMEARLAQRVVGQDEAVRAIAKAVRRGRVGLR 600 Query: 593 DPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPG 652 DP +PIGSFLFLGP+GVGKTEL KALA F+FD ++A+ R+DMSEFME+H RL+GAPPG Sbjct: 601 DPGKPIGSFLFLGPSGVGKTELAKALAEFLFDDEQALTRMDMSEFMERHMAQRLIGAPPG 660 Query: 653 YVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNT 712 Y E+GG+LTEA RRRPYSV+L DEVEKAH DVFN+LLQ+LDDGRLTDG+GR DF NT Sbjct: 661 YADSEQGGFLTEAARRRPYSVLLFDEVEKAHADVFNLLLQILDDGRLTDGRGRLADFSNT 720 Query: 713 VVIMTSNLGSDLIQERFGELDYAH-----MKELVLGVVSHNFRPEFINRIDEVVVFHPLG 767 VVIMTSN+GS + E +L +++++L + FRPEF+NR+D++VVF L Sbjct: 721 VVIMTSNIGSKRVLETDAKLWTTEDGREAIRDVLLEELRGFFRPEFLNRVDDIVVFKALS 780 Query: 768 EQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIEN 827 ++ + I IQL+RL + L ++ + ++D A L E GY+P GARPLKRAI ++++N Sbjct: 781 KEDLRGIVDIQLRRLEQLLTDKDIRLALTDAAKARLVELGYEPSLGARPLKRAILRELQN 840 Query: 828 PLAQQILSGELVPGKVIRLEVNEDRIV 854 PLA+ IL+G PG+ ++++V +++ V Sbjct: 841 PLAETILAGGYQPGQTMQVDVVDEKFV 867 >UniRef50_C1GY73 Chaperone protein clpB n=1 Tax=Paracoccidioides brasiliensis Pb01 RepID=C1GY73_PARBA Length = 732 Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust. Identities = 340/716 (47%), Positives = 468/716 (65%), Gaps = 72/716 (10%) Query: 145 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204 GG + G E ++ AL++Y +DLT RA+ GKLDPVIGRD EI+RTIQ+L RRTKNNPVL Sbjct: 70 GGTHRMNMGGEPEKSALEEYGVDLTARAKDGKLDPVIGRDGEIQRTIQILSRRTKNNPVL 129 Query: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264 IG G GKTAI+EGLAQRI+ G+VPE +K +RV++LD+G L+AGAK+RG+FEERLK VL Sbjct: 130 IGSAGTGKTAILEGLAQRIVRGDVPESVKNKRVISLDLGQLIAGAKFRGDFEERLKKVLK 189 Query: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324 ++ + +G VILF+DELHT++G GKA+G++DA N+LKPAL+RGEL C GATTL+EYRQ IE Sbjct: 190 EVEEAQGGVILFVDELHTLLGLGKAEGSIDASNLLKPALSRGELQCCGATTLNEYRQ-IE 248 Query: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384 KD AL RRFQ + V EPS Sbjct: 249 KDVALARRFQPIVVEEPS-----------------------------------------E 267 Query: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444 PD AI +D +I+++++S L KE+D SK+R + L Sbjct: 268 SKPD-AIQELDRQIMTIQIELES---------------------LRKETDIPSKERREKL 305 Query: 445 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504 E L K+ + E + W+ EKA L + K +LE+A++ +EQA+R G+ A+ SEL+Y Sbjct: 306 EELLKTKQDEVKEFTDVWEKEKAELDAIKQAKEDLERARVDLEQAQREGNFAKASELRYS 365 Query: 505 KIPELEKQL-----EAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKL 559 IP+LE +L + AT + LL + VT +IA V++R TGIPV+++M E EKL Sbjct: 366 IIPKLENKLPKEGSDTATSTTADGVVLLHDSVTSDDIAGVVSRTTGIPVNKLMAGEVEKL 425 Query: 560 LRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALA 619 + ME L V GQ+EA+ AV+NA+R RAGL+ NRP+ SF+FLGPTGVGKTELCK +A Sbjct: 426 IHMEDTLRQSVRGQDEALCAVANAVRMQRAGLSGENRPLASFMFLGPTGVGKTELCKKMA 485 Query: 620 NFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEV 679 F+F ++ A++R DMSEF EKH+VSRL+G+P GYVGYE+ G LTEAVRR+PY+V+L DE Sbjct: 486 GFLFSTESAVLRFDMSEFQEKHTVSRLIGSPAGYVGYEDAGQLTEAVRRKPYAVLLFDEF 545 Query: 680 EKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLI---QERFGELDYAH 736 EKAH D+ +LLQVLD+G LTD QG +DFRNT++++TSNLG++++ GE Sbjct: 546 EKAHRDISALLLQVLDEGFLTDAQGHKIDFRNTLIVLTSNLGAEILVGSDPTLGEEVSTE 605 Query: 737 MKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHIS 796 +K V+ V ++ PEF+NRIDE ++F L + + I I+L+ L RL++R + + Sbjct: 606 IKSAVMATVQTSYPPEFLNRIDEFIIFKRLSRKALRDIVDIRLRELQLRLDDRRITLKVD 665 Query: 797 DEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDR 852 D L + GYDP YGARPL R I ++I N LA +I+ G++ G+V + +N D+ Sbjct: 666 DGVKGWLCDKGYDPRYGARPLNRLIAKEIGNRLADKIIRGQVTTGQVAHVTLNADK 721 >UniRef50_C2D9C6 ATPase with chaperone activity, ATP-binding subunit n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D9C6_9ACTN Length = 875 Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust. Identities = 366/860 (42%), Positives = 518/860 (60%), Gaps = 103/860 (11%) Query: 33 HLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLN 92 H++ A L E SV+ +L+S I Q +I ++L + G V S R L Sbjct: 32 HILLAYLKDEENSVTQVLSSFDITYAQA-YEIVESLASTGAADAASGHVPFSALTKRALA 90 Query: 93 LCDKLAQKRGDNFISS-ELFV--LAALESRGTLADILKAAGATTANITQAIEQM------ 143 LA I++ +LF+ LA ES L +L G + ++++ AI+ + Sbjct: 91 QAFTLASAHATGLITTKDLFIAMLALPESHACL--VLTRIGVSFSSLSTAIDALDDSEEY 148 Query: 144 ---RGGESVNDQGAEDQRQA-----------------LKKYTIDLTERAEQGKLDPVIGR 183 ES D+ +D + LK+Y +L A+Q KLDPVIGR Sbjct: 149 SAPEDAESTQDEQDDDLTEVAYGIPSASQARSKMGKLLKRYGKNLVAVAQQEKLDPVIGR 208 Query: 184 DEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMG 243 D+EI R Q+L RR KNNP+++G+PGVGKTA+VEGLAQ I P L +++ LD+ Sbjct: 209 DKEITRIAQILARRQKNNPLILGDPGVGKTAVVEGLAQLIATHNAPVTLADKQIWTLDIS 268 Query: 244 ALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPAL 303 +++AGAKYRGEFE+RLK V+N++ ++ N+ILFIDE+HT++GAG A+G++DA ++LKP L Sbjct: 269 SMLAGAKYRGEFEDRLKRVINEV-RKATNIILFIDEIHTIIGAGSAEGSIDAASILKPPL 327 Query: 304 ARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHV 363 +R E+ +GATT +EYR++IEKD ALERRFQ V V EP+V T+ IL+GL RYE HHV Sbjct: 328 SRSEIQVIGATTAEEYRKHIEKDPALERRFQPVEVCEPTVSQTLQILKGLSARYEAFHHV 387 Query: 364 QITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLK 423 T A+V A LSHRYI DR LPDKAID+IDEA + + +P E+ + + +LK Sbjct: 388 HYTQNALVEATRLSHRYIQDRFLPDKAIDVIDEAGARKSVVKRHEPHEIVTMRTALAKLK 447 Query: 424 LEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAK 483 +++ L+ + E + + ++E S E++ ++W+ +AS EQ Sbjct: 448 EKKERLL--AHENYEDAASVRDDEKS-LEQKIVHAVKDWEKSRAS-----------EQQN 493 Query: 484 IAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARW 543 + V D+AR V++ Sbjct: 494 V------DVNDIAR-----------------------------------------VISDI 506 Query: 544 TGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLF 603 +G+PV+ + E E EKLLR EQELH R+IGQ EAV V++AIRRSR+ L DP RP GSF+F Sbjct: 507 SGVPVTSLTEKESEKLLRCEQELHKRLIGQKEAVAKVAHAIRRSRSPLKDPARPGGSFIF 566 Query: 604 LGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLT 663 LGP+GVGKTEL K+LA F+F + EA++ DMSEFMEKH VS+LVGAPPGYVGY++GG LT Sbjct: 567 LGPSGVGKTELAKSLAEFLFGTQEALISFDMSEFMEKHEVSKLVGAPPGYVGYDQGGELT 626 Query: 664 EAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSD 723 +AVRRRPYSV+L DE+EKAHPDVFNILLQ+L++GRLTDGQGR VDF NTV+IMTSN+G+ Sbjct: 627 KAVRRRPYSVVLFDEIEKAHPDVFNILLQILEEGRLTDGQGRVVDFSNTVIIMTSNIGAR 686 Query: 724 LIQER----FGE-----LDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASI 774 I F L Y +K V + +FRPEF+NR+DE+VVF L ++ + I Sbjct: 687 EIAHTSPMGFSSQGDDGLSYKEIKSRVKSELKRSFRPEFLNRVDEIVVFTTLSKEELRKI 746 Query: 775 AQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQIL 834 ++ + +L RL + + +SD A L+++ G DP+YGARPL+R +Q+ +E+ LA+ +L Sbjct: 747 VELMVSQLAYRLAQEHIMLTLSDAACDLIAQKGTDPIYGARPLRRTLQRLVEDRLAEDLL 806 Query: 835 SGELVPGKVIRLEVNEDRIV 854 + G + ++ E +V Sbjct: 807 EHKWSAGDEVYVDAQEHELV 826 >UniRef50_Q54316 Hemolysin B n=25 Tax=cellular organisms RepID=HLYB_TREHY Length = 828 Score = 642 bits (1655), Expect = 0.0, Method: Compositional matrix adjust. Identities = 362/852 (42%), Positives = 528/852 (61%), Gaps = 84/852 (9%) Query: 22 LGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQALNRLPQVEGTGGDV 81 L HD + P H++ LL + + +L I+ +L+ ++ A+ + G + Sbjct: 25 LNHD--MVTPEHILLGLLYESEALATRVLMRLKIDLDRLKLELESAMVK-SSTTKVFGTL 81 Query: 82 QPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL-ESRGTLADILKAAGATTANITQAI 140 + + ++++ + A+ N+I +E +L L E GT ++L + G + Q I Sbjct: 82 PTAPRVQKLISRSAEEARALSHNYIGTEHLLLGLLREESGTAYNVLTSMGLELTILRQEI 141 Query: 141 EQMRGGESVNDQGAEDQRQ----------ALKKYTIDLTERAEQGKLDPVIGRDEEIRRT 190 +M G N E Q L ++ DLT+ A LD VIGR+ E+ R Sbjct: 142 LKMLGVAGSNISSMEQTSQEDNVKKVKTPTLDQFARDLTKMARDKALDRVIGRENEVMRV 201 Query: 191 IQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAK 250 +Q+L RR KNNP+L+GEPGVGKTAIVEGLA++I+ +VP+ L +RVL LD+ ++VAG K Sbjct: 202 VQILSRRKKNNPILLGEPGVGKTAIVEGLAEKIVAADVPDILLKKRVLTLDLSSVVAGTK 261 Query: 251 YRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHC 310 YRGEFEER+K ++ ++ K+ N+I+FIDELHT++GAG A+GA+DA NMLKPAL+RGE+ C Sbjct: 262 YRGEFEERIKNIVLEI-KKASNIIIFIDELHTLIGAGGAEGALDAANMLKPALSRGEIQC 320 Query: 311 VGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAI 370 +GATT++EY++YIEKD AL RRFQ + V EPS+EDTI IL G+K +YE HH V+ TD AI Sbjct: 321 IGATTINEYKKYIEKDGALVRRFQPINVEEPSIEDTIEILNGIKGKYEEHHKVKYTDEAI 380 Query: 371 VAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALM 430 AAA LS RYI +R LPDKAIDLIDEA S R+ ++P+ Sbjct: 381 NAAAVLSKRYIFERHLPDKAIDLIDEAGSRARLLNMTRPQ-------------------- 420 Query: 431 KESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQAR 490 ++ +LE++ + EL Q K + +++ Sbjct: 421 -----------------------EFKDLEKKIE--------------ELNQQKKRVVESQ 443 Query: 491 RVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSR 550 D A++ + +I L+++L + + + + + +I V++ T IP+ R Sbjct: 444 NFEDAAKIRD----EITSLQEELSKKEEKCREEREKIETFIEEDDIRHVISEITNIPIKR 499 Query: 551 MMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVG 610 ++ SE ++L+ ME+ELH +V+GQ EA+ ++S AIRRSRAGL RP+GSF+FLGPTGVG Sbjct: 500 LLNSESKRLIGMEEELHQKVVGQKEAISSISKAIRRSRAGLKTSKRPLGSFIFLGPTGVG 559 Query: 611 KTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRP 670 KT L K L+ FMF +A++RIDMSEFMEK +VSRL+GAPPGYVGYEEGG LTE VRR+P Sbjct: 560 KTALAKVLSEFMFGDSDALIRIDMSEFMEKFAVSRLIGAPPGYVGYEEGGGLTEKVRRKP 619 Query: 671 YSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGS-DLIQ-ER 728 YS+IL DE+EKAHPDV NILLQVL++G+LTD GR VDF NT++I+TSNLG+ D+++ Sbjct: 620 YSLILFDEIEKAHPDVTNILLQVLEEGQLTDNFGRKVDFSNTIIIITSNLGARDIVKGSS 679 Query: 729 FG------ELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRL 782 G E D +K L + NF PEF+NRID+++VFH L ++ + I I LK L Sbjct: 680 LGFNAVGSEKDANDIKNFALEELKQNFNPEFLNRIDDIIVFHTLSKEDLKDIINIMLKEL 739 Query: 783 YKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGK 842 + ++ER I++S+EA + + G+D YGAR L+RAIQ++IE+ ++ +IL G + G Sbjct: 740 NEAIKERNIVINLSEEAKNYIIDKGFDKKYGARSLRRAIQKEIEDYVSTEILFGNIEDGD 799 Query: 843 VIRLEVNEDRIV 854 I ++ N+ ++ Sbjct: 800 TINVDRNDGSLI 811 >UniRef50_Q9PKA8 Probable ATP-dependent Clp protease ATP-binding subunit n=25 Tax=Bacteria RepID=CLPC_CHLMU Length = 870 Score = 639 bits (1648), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/699 (47%), Positives = 476/699 (68%), Gaps = 74/699 (10%) Query: 145 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204 GG S+ E + ALK Y DLTE ++ +LDPVIGR E+ R I +L RR KNNPVL Sbjct: 191 GGHSLGGDKPE-KLSALKAYGYDLTEMFKEARLDPVIGRSAEVERLILILCRRRKNNPVL 249 Query: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264 IGE GVGKTAIVEGLAQ+I++GEVPE L+ +R++ LD+ ++AG KYRG+FEER+K V++ Sbjct: 250 IGEAGVGKTAIVEGLAQKIVSGEVPEALRKKRLITLDLALMIAGTKYRGQFEERIKAVMD 309 Query: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324 ++ K GN++LFIDELHT+VGAG A+GA+DA ++LKPALARGE+ C+GATTLDEYR++IE Sbjct: 310 EVRKH-GNILLFIDELHTIVGAGAAEGAIDASHILKPALARGEIQCIGATTLDEYRKHIE 368 Query: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384 KDAALERRFQK+ V PSV++T+ ILRGLK++YE HH+V ITD A+VAAA LS +Y+ R Sbjct: 369 KDAALERRFQKIVVQPPSVDETVEILRGLKKKYEEHHNVFITDEALVAAAKLSDQYVHGR 428 Query: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLK--LEQQALMKESDEASKKRLD 442 LPDKAIDL+DEA + +R+ +P EL RL+ I K EQ +E ++A+ R Sbjct: 429 FLPDKAIDLLDEAGARVRVNTMGQPSELLRLEAEIESTKQAKEQAIGTQEYEKAASLR-- 486 Query: 443 MLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQ 502 +EE +E+ S ++++W++ K E+ ++ +++ +A++ +Q Sbjct: 487 --DEEKKLREK-LSNMKQQWESNK-------------EEHQVPVDEEA----VAQVVSVQ 526 Query: 503 YGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRM 562 G IP AR T E+E EKLL + Sbjct: 527 TG-IPA--------------------------------ARLT--------EAESEKLLML 545 Query: 563 EQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFM 622 E L +VIGQ++AV ++ AIRRSR G+ DPNRP+GSFLFLGPTGVGKT L + +A M Sbjct: 546 ENTLQKKVIGQDQAVASICRAIRRSRTGIKDPNRPMGSFLFLGPTGVGKTLLAQQIAVEM 605 Query: 623 FDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKA 682 F +++++++DMSE+MEK + ++++G+PPGYVG+EEGG+LTE VRRRPY V+L DE+EKA Sbjct: 606 FGGEDSLIQVDMSEYMEKFAATKMMGSPPGYVGHEEGGHLTEQVRRRPYCVVLFDEIEKA 665 Query: 683 HPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQER----FG---ELDYA 735 HPD+ +++LQ+L+ GRLTD GR +DFRNT++IMTSNLG+DLI++ FG +DY Sbjct: 666 HPDIMDLMLQILEQGRLTDSFGRKIDFRNTIIIMTSNLGADLIRKTGEIGFGLRSHMDYG 725 Query: 736 HMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHI 795 +KE + V + +PEFINR+DE V+F PL ++ ++ I +++ +L RL+ ++I Sbjct: 726 VIKEKIDAAVKKHLKPEFINRLDESVIFKPLEKEALSEIIHLEINKLGSRLQNHQMALNI 785 Query: 796 SDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQIL 834 D + L + G+ P GARPL+R ++Q +E+PLA+ +L Sbjct: 786 PDSVVSFLVDKGHSPEMGARPLRRVVEQYLEDPLAEMLL 824 >UniRef50_B0SCX5 Endopeptidase Clp, ATP-dependent proteolytic subunit n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SCX5_LEPBA Length = 795 Score = 638 bits (1645), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/692 (46%), Positives = 468/692 (67%), Gaps = 40/692 (5%) Query: 151 DQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGV 210 D ++ + + + ++L + A +GKLDPVIGR +EIR +++L RR+KNNPVL+G GV Sbjct: 121 DLNVKETDEEVPNFLVNLNDLAREGKLDPVIGRSKEIRSVMEILGRRSKNNPVLVGSAGV 180 Query: 211 GKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQE 270 GKTAIVEGLA++I+ G VP+ LKG+ + +LDMG L+AG KYRGEFEE+L +L + Q Sbjct: 181 GKTAIVEGLAEQIVKGRVPDVLKGKTIFSLDMGQLMAGTKYRGEFEEKLTALLRYIKGQA 240 Query: 271 GNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALE 330 G ILFIDE+H +VGAGK DGAMDA N+LKPALARGELHC+GATT DE+++YI D ALE Sbjct: 241 GEAILFIDEIHQLVGAGKTDGAMDAANLLKPALARGELHCIGATTGDEFQKYILGDQALE 300 Query: 331 RRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKA 390 RRF+ V V EPS ED I IL G+++++E+HH ++I+D AI A+ LS +YI D+ LPDKA Sbjct: 301 RRFRAVPVNEPSKEDAIEILMGIRDKHEIHHGIKISDEAIYASVLLSDQYITDKFLPDKA 360 Query: 391 IDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSD 450 IDL+DEAAS++++ ++ P EL L+ I K+ Q +++ +E K +++L Sbjct: 361 IDLVDEAASALKLSAEAMPTELVELEGEIRSKKIFAQ--VEKKNEEILKEIEVL------ 412 Query: 451 KERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELE 510 E+++ +E W+ E SL +IK ++++ K ++ A++ D S L+Y +PELE Sbjct: 413 -EKKFQAGKEIWEKEVNSLKQIASIKNKIDRVKFDLDAAQQRADYTEASRLKYAVLPELE 471 Query: 511 KQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRV 570 K+L + L RN IA V+AR TGIPV +++++++E LL +E +L+ V Sbjct: 472 KELSTFQN----SWILERN-----HIAAVIARQTGIPVEKILKTKQENLLHLEDDLNSVV 522 Query: 571 IGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMV 630 GQ E++ +++ + S AG++ RP+GSFL GPTGVGKTE KA+A F+FD + +V Sbjct: 523 YGQKESIREIADTLLTSYAGISSETRPLGSFLLKGPTGVGKTETAKAIAKFLFDQESNLV 582 Query: 631 RIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNIL 690 R+D+SE+ EKHSV++L+GAP GY+GY+EGG LTEA+RR+PYSV+L DEVEKAHPD +IL Sbjct: 583 RLDLSEYSEKHSVAKLIGAPAGYIGYDEGGILTEAIRRKPYSVVLFDEVEKAHPDFSDIL 642 Query: 691 LQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFR 750 LQ+LDDGRLTD +GRT++F+NT+VI+T+N + + +F+ Sbjct: 643 LQILDDGRLTDNKGRTINFKNTIVILTTNSKN----------------------IEVDFK 680 Query: 751 PEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDP 810 PE + R+D ++ +H L + + + QL+ L RL+ +G I +S+ +L E G+DP Sbjct: 681 PEVLGRLDAILTYHSLDSSIMEKLIEKQLRSLNDRLKVKGVVIELSESTEHILREQGFDP 740 Query: 811 VYGARPLKRAIQQQIENPLAQQILSGELVPGK 842 +GARPL + + PLA+ ILSG +V GK Sbjct: 741 KFGARPLGSVFNRIVNRPLAKAILSGTMVEGK 772 >UniRef50_A3DC71 ATPase AAA-2 n=13 Tax=Clostridiales RepID=A3DC71_CLOTH Length = 803 Score = 631 bits (1628), Expect = e-179, Method: Compositional matrix adjust. Identities = 344/698 (49%), Positives = 454/698 (65%), Gaps = 73/698 (10%) Query: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220 L Y +L +A++GK+D VIGR+ EI R IQ+L RR KNNPVLIGEPGVGKTAI EGLA Sbjct: 145 LDTYGTNLIVKAKEGKIDRVIGRNREIERVIQILNRRNKNNPVLIGEPGVGKTAIAEGLA 204 Query: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280 RI+N +VP L V LD+ ++VAG ++RG+FE R+KG++ + K GN+IL IDE+ Sbjct: 205 LRIVNRDVPVKLFNAEVYVLDLTSIVAGTQFRGQFENRMKGIIEE-CKALGNIILVIDEI 263 Query: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340 H ++GAG+A+GAM+A N+LKPALA+GE+ +GATTLDEYR++IEKD+ALERRFQ V V E Sbjct: 264 HNIMGAGEAEGAMNAANILKPALAKGEIQVIGATTLDEYRKHIEKDSALERRFQPVLVDE 323 Query: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400 PSVE+TI ILRG+K+ YE +H V+I+D I AA LS RYI DR LPDKAID++DEA S Sbjct: 324 PSVEETIEILRGIKDYYESYHRVKISDEVIRAAVILSERYITDRFLPDKAIDVLDEAGS- 382 Query: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 460 A+ K + +L +Y L+E Sbjct: 383 ----------------------------------RANIKNVVLL---------EYEALKE 399 Query: 461 EWKAEKASLSGTQTIKAELEQAKIA--IEQARRVGDLARMSELQYGKIPELEKQLEAATQ 518 E K ++ E E A A IE ++ DL K+ E K L+ + Sbjct: 400 ELKK----------VQEEKENAVSADSIEDYQKAADL---------KVREC-KLLQQIKE 439 Query: 519 LEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVD 578 LE K+ + ++T +IA V+ WT IPV R+ E E EKLL +E+ LH RVIGQ+EAV Sbjct: 440 LEQKSKDM---ELTVDDIAYVIESWTKIPVQRLTEIEAEKLLNLEERLHKRVIGQHEAVK 496 Query: 579 AVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFM 638 +V+ AIRR+RA +P SF+F+GPTGVGKTEL KALA +F S+EA++R+DMSE+M Sbjct: 497 SVARAIRRNRADFKKRKKP-ASFIFVGPTGVGKTELVKALAVELFGSEEALIRLDMSEYM 555 Query: 639 EKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGR 698 EKH+VS+L+GAPPGYVGY+EGG LTE VRR+PYSVILLDE+EKAHPDVFN+LLQ+LDDGR Sbjct: 556 EKHTVSKLIGAPPGYVGYDEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNMLLQILDDGR 615 Query: 699 LTDGQGRTVDFRNTVVIMTSNLGSDLIQER--FGELDYAHMKELVLGVVSHNFRPEFINR 756 TD GRTV F NTV+IMTSN G+ L F +Y ++ V V+ FRPEF+NR Sbjct: 616 ATDSHGRTVSFENTVLIMTSNAGTSLKASSIGFANDNYIALENKVKEVLKETFRPEFLNR 675 Query: 757 IDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARP 816 +DE++VF+ L + + I + K + + +E + + D + + E GYDP YGARP Sbjct: 676 VDEIIVFNHLTKDELKQIVDLMFKDVVEEVENKKMTVKFQDGVREFILEKGYDPKYGARP 735 Query: 817 LKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIV 854 L+R IQ+ IE+ LA+ L G L G I + V + IV Sbjct: 736 LRRTIQRYIEDELAEMYLKGLLAEGCSIVVGVRDGNIV 773 >UniRef50_C9RMJ0 ATPase AAA-2 domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RMJ0_FIBSS Length = 838 Score = 631 bits (1627), Expect = e-179, Method: Compositional matrix adjust. Identities = 374/877 (42%), Positives = 528/877 (60%), Gaps = 118/877 (13%) Query: 22 LGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQALNRLPQVEGTGGD- 80 LG D +E HL+ L+ ++ G S L + +N +L I +AL+ + GGD Sbjct: 26 LGSDCVTVE--HLLFGLVREDSGVASETLKALKVNLTELSETIQRALSTNGGLMTVGGDS 83 Query: 81 ----VQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAGATTANI 136 + + VL K+A++ G FI E +LA L+ + A AA +T N+ Sbjct: 84 HGGLLTFTGQCKAVLYNAAKIAKEEGVQFIGPEHLMLAILQQTDSPA----AATLSTYNV 139 Query: 137 T--------QAIEQMRGGESVNDQGAEDQ--------RQA----------LKKYTIDLTE 170 T I++ G+ +++ ED+ RQA L+ + DLT Sbjct: 140 TFENYQEMLMQIKRQADGQPMDEGQPEDEPRERYTQTRQANPQSRSKTPILEHFGRDLTA 199 Query: 171 RAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPE 230 A GKLDP+IGR+ EI R IQ+L RR KNNP LIGEPGVGKTAI+EGLA +I+ ++P+ Sbjct: 200 MARAGKLDPIIGREAEIERLIQILCRRKKNNPALIGEPGVGKTAIIEGLALKIVQRKIPD 259 Query: 231 GLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKAD 290 L +RV+ LD+ A+VAG KYRG+FEER+KG++ +L + +VILFIDELHT+VGAG ++ Sbjct: 260 LLANKRVVTLDVAAMVAGTKYRGQFEERVKGLIMELQRVGNSVILFIDELHTIVGAGGSE 319 Query: 291 GAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAIL 350 G++DA N+ KPALARGEL C+GATT DEYR+YIEKD ALERRFQ + V P+VED+I IL Sbjct: 320 GSLDASNIFKPALARGELQCIGATTFDEYRKYIEKDPALERRFQTIIVNPPTVEDSIQIL 379 Query: 351 RGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPE 410 GL+ +YE HH+V T A+ AA L RYI++R LPDKAID++DEA + + Sbjct: 380 EGLRPKYEQHHNVHYTPDAVRAAVELGERYISERFLPDKAIDVLDEAGARV--------- 430 Query: 411 ELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEW-----KAE 465 R+ +K+ Q D+ N +E+E K E Sbjct: 431 -------RLNSIKIPQ---------------DLQN------------MEDELGVCLQKKE 456 Query: 466 KASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMR 525 +A + T A+L AR ELQ I E +KQL++ E +T Sbjct: 457 EAVANQDYTSAAQLR---------------AREEELQ-NSIAERKKQLQSE---ESET-- 495 Query: 526 LLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIR 585 V D I +V+++ TGIPV R+ E +KL+ + E+ RVIGQ++AVDA+ +IR Sbjct: 496 ---PVVDDNVIRDVISKMTGIPVRRLGGEEAQKLIHLGDEIKQRVIGQDQAVDAIVKSIR 552 Query: 586 RSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSR 645 RSRAG+ + RP+GSFLFLGPTGVGKTEL K L +F S++++VRIDMSE+MEKHSVSR Sbjct: 553 RSRAGIRNNKRPMGSFLFLGPTGVGKTELAKVLCKELFGSEDSLVRIDMSEYMEKHSVSR 612 Query: 646 LVGAPPGYVGYEE-GGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQG 704 L+GAPPGYVG+E+ GG L+E VR+ PYSV+LLDE+EKAHPD++N+LLQ+LDDG LTD G Sbjct: 613 LIGAPPGYVGFEDGGGQLSEKVRKHPYSVVLLDEIEKAHPDIYNLLLQILDDGILTDSYG 672 Query: 705 RTVDFRNTVVIMTSNLGSDLIQE-------RFGEL-DYAHMKELVLGVVSHNFRPEFINR 756 R ++F+NT++IMTSN G+ ++ + GE DY M+ + V F PEF+NR Sbjct: 673 RKINFKNTIIIMTSNAGAREVRHSSGMGFTKMGETDDYERMETAIREEVKRVFSPEFLNR 732 Query: 757 IDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARP 816 +DE +VF L ++ + S+ IQ+ L K L +RG + +S EA + + + YD GARP Sbjct: 733 VDEQIVFRALSKKDLVSVVDIQMGFLQKNLSDRGILLEMSQEAKEFVVNHNYDASLGARP 792 Query: 817 LKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRI 853 ++R+IQ +E+ +A+ +L G + I + V ++ Sbjct: 793 IRRSIQNLVEDEIAEGLLLGTMTDFSTIYVGVENGKL 829 >UniRef50_D1J7B8 ATP-dependent Clp protease ATP-binding subunit clpA homolog n=1 Tax=Ectocarpus siliculosus RepID=D1J7B8_ECTSI Length = 903 Score = 629 bits (1623), Expect = e-178, Method: Compositional matrix adjust. Identities = 353/766 (46%), Positives = 490/766 (63%), Gaps = 89/766 (11%) Query: 93 LCDKLAQKRGDNFISSELFVLAALE-----SRGTLADILKAAGATTANITQAIEQMRGGE 147 +C K+ Q G N + ++L L+ S LA++ ++ NI Q + Sbjct: 119 ICAKVLQNLGANIPRIKSYILNELDQNHEGSPKVLANVASGEQSSNPNIKQTKDLF---- 174 Query: 148 SVNDQGAEDQRQA--LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLI 205 + D A L +YT DLTE AE+ K+DPV+GR+ EI R IQ++ RR KNNP+LI Sbjct: 175 -LFDDLDPSSLTAPNLMEYTTDLTESAERAKIDPVVGRENEIERVIQIISRRRKNNPILI 233 Query: 206 GEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLND 265 GEPGVGKTA+ EGLAQRI+ EVP L ++ LD+ L+AG KYRGEFEERLK ++ + Sbjct: 234 GEPGVGKTAVAEGLAQRIVQREVPSELHDYKIFVLDITLLLAGTKYRGEFEERLKRIVQE 293 Query: 266 LAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEK 325 L K++ N+I+ IDE+HT+VGAG A+GA+DA N+LKPALARGEL C+GATT+DEYRQ+IEK Sbjct: 294 L-KEQKNIIIVIDEVHTLVGAGAAEGALDAANILKPALARGELQCIGATTIDEYRQHIEK 352 Query: 326 DAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQ 385 D ALERRFQ V+V EPS+E+TIAIL+GL+ RYE HH ++IT+ A+VAAA L +YIADR Sbjct: 353 DPALERRFQPVWVNEPSIEETIAILKGLRLRYEQHHRLEITNEALVAAANLGAQYIADRF 412 Query: 386 LPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASK-KRLDML 444 LPDKAIDLIDE ++ +R+ P + LD+ E + ++++ D A + +R + Sbjct: 413 LPDKAIDLIDEGSARVRLVNYRLPPAVQILDK-------ELRRILEDKDLAVREQRFETA 465 Query: 445 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504 E D+ S++ KA S T K LE+ K+ + D+A + L Sbjct: 466 TEIRDDELSLRSQMGAIIKA-----SNTPIPKGVLERLKVGSQ------DIASIVAL--- 511 Query: 505 KIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQ 564 WTG+PV+++ + E +LL +E Sbjct: 512 --------------------------------------WTGVPVTKITKDENTRLLELEN 533 Query: 565 ELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFD 624 LH RVIGQ EAV AV+ A+RR+R G+ + RPI SF F GPTGVGKTEL K LA+F F Sbjct: 534 VLHQRVIGQKEAVSAVARAVRRARVGMRNMKRPIASFFFSGPTGVGKTELTKTLASFFFG 593 Query: 625 SDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHP 684 +++AMVR+DMSEFME+H+V++L+G+PPGY+GY EGG LTEAVRR+PY+VIL DEVEKAHP Sbjct: 594 AEDAMVRLDMSEFMERHTVAKLIGSPPGYIGYNEGGQLTEAVRRKPYTVILFDEVEKAHP 653 Query: 685 DVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQER--------FG------ 730 DVFN+LLQ+L+DGRLTD +GR +DF+NT++IMTSNLGS IQ+ FG Sbjct: 654 DVFNLLLQILEDGRLTDSKGRIIDFKNTILIMTSNLGSKAIQDNDLSSQGMGFGGEKADT 713 Query: 731 -ELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRL-EE 788 + YA + V + F+PEF+NRIDE++VF L + +I IA I + L +R+ +E Sbjct: 714 QKTKYAQLCNTVGESLKAFFKPEFLNRIDEIIVFEQLTKTNITEIAVIMVNDLIERVKKE 773 Query: 789 RGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQIL 834 + + ++ ++LL E G++P YGARPL+RA+ + +E+ ++ + L Sbjct: 774 KDITLSLTPRMMELLVEEGFNPTYGARPLRRALVKLVEDKVSLEYL 819 >UniRef50_C1EC57 ATP-dependent clp protease n=2 Tax=Micromonas RepID=C1EC57_9CHLO Length = 1033 Score = 626 bits (1615), Expect = e-177, Method: Compositional matrix adjust. Identities = 343/711 (48%), Positives = 462/711 (64%), Gaps = 74/711 (10%) Query: 155 EDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214 +D++ L + DLT+RA K+DP+IGRDEE+ R IQ+L RR+KNNP+L+GEPGVGKTA Sbjct: 279 KDEKSPLNDFCFDLTQRARDEKIDPIIGRDEEVERVIQILARRSKNNPILLGEPGVGKTA 338 Query: 215 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 274 I EGLA RI++G VPE L+ +RVL+LD+G L+AGAK RGE E R+ G++ ++ ++ +V+ Sbjct: 339 IAEGLALRIVSGNVPEFLREKRVLSLDVGLLMAGAKERGELESRVTGLIKEIQDKK-DVV 397 Query: 275 LFIDELHTMVGAGKADGA----MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALE 330 L IDE+HT++GAG MD NMLKP LARGEL C+GATT+DE+R+YIEKDAALE Sbjct: 398 LMIDEVHTLIGAGAVGKGGGGGMDISNMLKPPLARGELQCIGATTVDEHRKYIEKDAALE 457 Query: 331 RRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKA 390 RRFQ V V EPS ED I IL GL+ERYE HH +ITD A++AA +S RYIADR LPDKA Sbjct: 458 RRFQPVMVEEPSEEDAIEILFGLRERYEAHHMCEITDDALIAAVQISSRYIADRFLPDKA 517 Query: 391 IDLIDEAASSIRM-QIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRL-DMLNEE- 447 IDL+DEA S+ R+ Q ++ E +D+ +E +K+ EA + + +L EE Sbjct: 518 IDLVDEAGSAARIKQYMAQKERRGEVDKATSMEAMEMWRALKQVSEAKEAAVRGLLFEEA 577 Query: 448 --LSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGK 505 L D+ER+ K +LS K+ ++ GD A YG Sbjct: 578 TLLRDREREV----------KTNLS------------KLGVKVDELTGDGA------YGG 609 Query: 506 IPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQE 565 KVT EI V A W+GIPV RM E+ L M+Q+ Sbjct: 610 A-----------------------KVTVDEIEAVAAMWSGIPVQRMTLDEQAILANMDQD 646 Query: 566 LHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDS 625 L VIGQ EAV AVS ++RR+R GL DPNRPI S LF GPTGVGKTEL K LA F S Sbjct: 647 LQGSVIGQEEAVSAVSRSLRRTRCGLKDPNRPIASMLFAGPTGVGKTELTKRLAEKYFGS 706 Query: 626 DEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPD 685 ++ MVR+DMSE+ME+HSVS+LVGAPPGYVG+ +GG LTEAVRR+P++++L DE+EKAHPD Sbjct: 707 EDNMVRLDMSEYMERHSVSKLVGAPPGYVGFGQGGTLTEAVRRKPFTILLFDEIEKAHPD 766 Query: 686 VFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERF-------------GEL 732 VFNILLQ+++DGRLTD QGR V F+N ++++TSN+GS +I + G Sbjct: 767 VFNILLQMMEDGRLTDSQGRVVSFKNCLIVLTSNVGSKVIAKGGGGLGFQLQDDDEEGSA 826 Query: 733 DYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYE 792 +Y ++E VL + + FRPE +NR+DE+V F L ++ + IA++ L+ R+ +G E Sbjct: 827 EYKRIREKVLDELKNFFRPEMLNRLDEIVCFKQLEKESVQRIARLMLRETAGRMRLKGME 886 Query: 793 IHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKV 843 + ++ A+ L E G+D YGARPL+RAI I++ L++ +L G + G V Sbjct: 887 MALTASAMDKLLETGFDKEYGARPLRRAITSIIDDNLSEAMLRGVIHEGDV 937 >UniRef50_A4E9C6 Putative uncharacterized protein n=3 Tax=Collinsella RepID=A4E9C6_9ACTN Length = 880 Score = 623 bits (1606), Expect = e-176, Method: Compositional matrix adjust. Identities = 362/891 (40%), Positives = 531/891 (59%), Gaps = 104/891 (11%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 LDR T++ + ++ A+ AL + + HL+ AL ++ G + L S I+ + Sbjct: 2 LDRFTDRARKVMSMAKQEALDLHSNKVGTEHLLLALAKEDEGIAAEALRSLDISYDDIMD 61 Query: 63 DINQALNRLPQV--EGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALE-SR 119 + + +P+ E + + ++ V+ ++A++ ++S+E ++ +E Sbjct: 62 TLKEVQTTVPEPSEETEAAKLAFTPLVISVMERSFRVARENNQTYVSTEHLLIGIVEEGN 121 Query: 120 GTLADILKAAGATTANITQAIEQM--------------------------RGGESVNDQG 153 G DIL G ++A+I +AIE++ G ++ +G Sbjct: 122 GMAMDILMRLGVSSASIKKAIEKLTAKDQDKKRPLAGAGAGRPGAGLPFFSGSDASQQKG 181 Query: 154 AEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKT 213 + + LK++ +LT++A G+LDPVIGR++E++R +++L RRTKNNP+++G+PGVGKT Sbjct: 182 S--GTETLKQFATNLTQKARDGELDPVIGREKEVQRMMEILSRRTKNNPLILGDPGVGKT 239 Query: 214 AIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNV 273 AIVEGLAQ+I G VPE L + + LD+ LVAGAKYRGEFEERLK V+ + A + +V Sbjct: 240 AIVEGLAQQIAAGNVPENLMNQNIWTLDLPGLVAGAKYRGEFEERLKNVIQE-ATEADDV 298 Query: 274 ILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRF 333 ILFIDE+HT++GAG A+G++DA +MLKP LARG +GATT +E+R+Y+ KD A ERRF Sbjct: 299 ILFIDEMHTIIGAGSAEGSIDASSMLKPVLARGAFQIIGATTAEEFRKYLTKDPAFERRF 358 Query: 334 QKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDL 393 Q + V EPSVEDT+ IL LK RYE HHHV+ T AI AAA LS+RYI DR LPDKAIDL Sbjct: 359 QTIDVEEPSVEDTVKILTALKPRYEEHHHVRYTQGAIEAAANLSNRYIQDRFLPDKAIDL 418 Query: 394 IDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKER 453 IDEA + R+ + PE + + R+ +LK Q EA++ SD Sbjct: 419 IDEAGARARIAANRAPEPVREAEHRVEELKAAAQ-------EATE----------SDDMN 461 Query: 454 QYSELEEEWKAEKASLS-GTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQ 512 + +E+ E+ KA + L+ AEL+ + + I+ + Q I + Sbjct: 462 KAAEITEQQKAAEIELAEAKAAWTAELDASPLTIDVS------------QIADIVSVTSG 509 Query: 513 LEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIG 572 + ++ E ++ RLL + E L R+IG Sbjct: 510 VPVSSLTESESRRLL---------------------------------QAESVLKTRIIG 536 Query: 573 QNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRI 632 Q+EAV+AV+ A+RRSR+ L DP RP GSF+FLGPTG GKTEL K LA ++F S +A++ Sbjct: 537 QDEAVEAVAKAVRRSRSPLKDPRRPGGSFIFLGPTGTGKTELAKTLAEYLFGSKDALISF 596 Query: 633 DMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQ 692 DMSEF + VS+L+G+PPGYVG++EGG LT+AVRR PYSV+L DE+EKAHPD+FNILLQ Sbjct: 597 DMSEFGSEFEVSKLIGSPPGYVGHDEGGQLTKAVRRHPYSVVLFDEIEKAHPDIFNILLQ 656 Query: 693 VLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQER----FGE-----LDYAHMKELVLG 743 VL++GRLTD QG+TVDFRNTV+IMTSN+G+ I + FG L + +K +G Sbjct: 657 VLEEGRLTDSQGKTVDFRNTVIIMTSNVGAREIAQDASVGFGTTGEQGLTSSEIKGRAMG 716 Query: 744 VVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLL 803 + FRPE +NRID++VVF L +++ IA + + L +RL G I ++D A + Sbjct: 717 ELKRLFRPELLNRIDDIVVFQKLSGENLTKIAHLLVDDLRQRLIANGMNIKLTDAAYDKI 776 Query: 804 SENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIV 854 G D GARPL+RAIQ+ IE+PL++++L+GE G + +V + + V Sbjct: 777 VAEGTDLTNGARPLRRAIQKLIEDPLSEELLAGEWGEGDTVLCDVADGKFV 827 >UniRef50_D1ZN19 Whole genome shotgun sequence assembly, scaffold_63 n=1 Tax=Sordaria macrospora RepID=D1ZN19_SORMA Length = 780 Score = 622 bits (1605), Expect = e-176, Method: Compositional matrix adjust. Identities = 336/726 (46%), Positives = 474/726 (65%), Gaps = 65/726 (8%) Query: 145 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204 GG + GA++++ AL++Y IDLT RA GKLDP Sbjct: 73 GGTHRMNLGADEEKPALEQYGIDLTARARDGKLDP------------------------- 107 Query: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264 GLA I+ G VPE +K +RV++LD+G+L+AGAK+RG+FEERLK VL Sbjct: 108 -------------GLALEIVKGAVPESIKNKRVISLDLGSLIAGAKFRGDFEERLKKVLT 154 Query: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324 ++ + G VILFIDELHT++G GKA+G++DA N+LKPAL+RGEL C GATTL+EYRQ IE Sbjct: 155 EVQQANGEVILFIDELHTLLGLGKAEGSIDASNLLKPALSRGELQCCGATTLNEYRQ-IE 213 Query: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384 KD AL RRFQ + V EP+VEDTI+ILRG+KE+YE+HH V+ITD A+VAAA S+RYI DR Sbjct: 214 KDVALARRFQPILVNEPTVEDTISILRGIKEKYEVHHGVRITDGALVAAAAYSNRYITDR 273 Query: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444 LPDKAIDL+DEAASS+R+Q +SKP+++ RLD++I+ +++E ++L KE D AS +R + L Sbjct: 274 FLPDKAIDLMDEAASSLRLQQESKPDDIQRLDQKIMTIQIELESLRKEKDVASVERREKL 333 Query: 445 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504 +L + + S L E+W+ EK+ + + +AEL++A+I +EQA+R G+ R SEL++G Sbjct: 334 EADLKKFQDEVSVLTEKWEKEKSEIDKIKQTQAELDRARIELEQAQRTGNFGRASELRFG 393 Query: 505 KIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQ 564 IP LEKQL + L+ + VT +IA V++R TGIP+ ++++ E Sbjct: 394 VIPNLEKQLPKDGERPTGDNTLIHDSVTADDIANVVSRITGIPILQVVQRP-----HGET 448 Query: 565 ELH----HRVIGQ-----NEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELC 615 + H R+ + NA +SR +P+ I S P GVGKTELC Sbjct: 449 DPHGGHPPRICSRPRRGSEGGRRRSENA--KSRTERREPSTGILSS-SSAPLGVGKTELC 505 Query: 616 KALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVIL 675 K LA F+F ++ A+VR DMSEF EKH++SRL+GAP GYVGYE+ G LTEAVRR+PY+V+L Sbjct: 506 KKLAGFLFSTESAVVRFDMSEFQEKHTISRLIGAPSGYVGYEDAGQLTEAVRRKPYAVLL 565 Query: 676 LDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYA 735 DE EKAH D+ +LLQVLD+G LTD QG VDF+NT++++TSNLG+D++ + + Y Sbjct: 566 FDEFEKAHRDISALLLQVLDEGYLTDAQGHKVDFKNTIIVLTSNLGADILVDANPLVPYK 625 Query: 736 H---------MKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRL 786 +K+ V+ VV+ + PEF+NRID +VF L + + I I+L+ L +RL Sbjct: 626 ETEDGDIHPDVKKAVMDVVASQYPPEFLNRIDSFIVFKRLALEALRDIVDIRLRELQERL 685 Query: 787 EERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRL 846 +R + + DE + L+E GYDP +GARPL R I +I N LA +I+ G++ G + Sbjct: 686 NDRRITLTVPDEVRQWLAERGYDPKFGARPLNRLITTEIGNGLADKIIRGQIKTGDNAVV 745 Query: 847 EVNEDR 852 E+ ED+ Sbjct: 746 EIKEDK 751 >UniRef50_B2RGN2 ATP-dependent Clp protease ATP-binding subunit ClpC n=34 Tax=Bacteroidetes RepID=B2RGN2_PORG3 Length = 859 Score = 617 bits (1591), Expect = e-175, Method: Compositional matrix adjust. Identities = 329/706 (46%), Positives = 460/706 (65%), Gaps = 74/706 (10%) Query: 160 ALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGL 219 AL + D+T A GKLDPV+GR++EI R IQ+L RR KNNPVLIGEPGVGK+AIVEGL Sbjct: 212 ALDTFGTDITAMAAAGKLDPVVGREQEIERVIQILSRRKKNNPVLIGEPGVGKSAIVEGL 271 Query: 220 AQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDE 279 A+RI+N +V L +R+++LD+ +VAG KYRG+FEERLK VL++L K+ +ILFIDE Sbjct: 272 AERIVNRKVSRILFDKRIISLDLAQMVAGTKYRGQFEERLKAVLDEL-KKNPQIILFIDE 330 Query: 280 LHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVA 339 +HT+VGAG A G+MD NMLKPALARG++ C+GATTLDEYR+ IEKD ALERRFQKV +A Sbjct: 331 IHTIVGAGSAAGSMDTANMLKPALARGQVQCIGATTLDEYRKNIEKDGALERRFQKVPIA 390 Query: 340 EPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAAS 399 + E+T+ IL+ +KE+YE +H V+ TD AI AA L+ RY++DR PDKAID +DEA + Sbjct: 391 PSTAEETLTILQNIKEKYEDYHGVRYTDEAIKAAVELTDRYVSDRFFPDKAIDAMDEAGA 450 Query: 400 SIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELE 459 S+ + ++ + K +++L EL+ S E Sbjct: 451 SVHI-----------------------------TNVVAPKEIEILEAELA------SVRE 475 Query: 460 EEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQL 519 + A KA E A +Q RR +I E +K+ E Sbjct: 476 NKLSAVKAQ---------NYELAASFRDQERRTQQ----------QIAEEKKKWE----- 511 Query: 520 EGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDA 579 + M R V + +A V+A TG+P R+ E E+L M +L +V+GQ+ A++ Sbjct: 512 --EQMSKHRETVDENVVAHVVALMTGVPAERLSTGEGERLRTMADDLKTKVVGQDTAIEK 569 Query: 580 VSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFME 639 + AI+R+R GL + +PIGSFLFLGPTGVGKT L K LA ++F+ + AM+R+DMSE+ME Sbjct: 570 MVRAIQRNRLGLRNEKKPIGSFLFLGPTGVGKTYLAKKLAEYLFEDENAMIRVDMSEYME 629 Query: 640 KHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRL 699 K SVSRLVGAPPGYVGYEEGG LTE VRR+PYSV+LLDE+EKAH DVFN+LLQV+D+G+L Sbjct: 630 KFSVSRLVGAPPGYVGYEEGGQLTERVRRKPYSVVLLDEIEKAHADVFNLLLQVMDEGQL 689 Query: 700 TDGQGRTVDFRNTVVIMTSNLGSDLIQERFG-----------ELDYAHMKELVLGVVSHN 748 TD GR V+F+NTV+I+TSN+G+ +++ FG E + H + ++ ++ Sbjct: 690 TDSLGRRVNFKNTVIIITSNVGTRQLKD-FGQGIGFRSEKDEEANKEHSRSVIQKALNKT 748 Query: 749 FRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGY 808 F PEF+NR+D++++F LG+ I + I+LK + R+ GY++ ++DEA +++ GY Sbjct: 749 FSPEFLNRLDDIILFDQLGKTEIRRMVDIELKAVLARIHRAGYDLVLTDEAKDVIATKGY 808 Query: 809 DPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIV 854 D YGARPLKR +Q ++E+ L ILSG++ G+ + L + I+ Sbjct: 809 DLQYGARPLKRTLQNEVEDRLTDLILSGQIEKGQTLTLSARDGEII 854 >UniRef50_C7HWH6 Negative regulator of genetic competence MecB/clpC n=3 Tax=Clostridiales Family XI. Incertae Sedis RepID=C7HWH6_9FIRM Length = 803 Score = 616 bits (1589), Expect = e-174, Method: Compositional matrix adjust. Identities = 353/868 (40%), Positives = 531/868 (61%), Gaps = 101/868 (11%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 +L+RLT + A +S +L HD +I HL+ AL+ + G + L AG N LR Sbjct: 5 KLNRLTGQ-----ARRESYSLSHD--YIGVEHLLLALM-KTGSLATKALEEAGANYELLR 56 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLV-RVLNLCDK---LAQKRGDNFISSELFVLAALE 117 + + +N + G G V+P+++ +V + D+ AQKR S E +LA L Sbjct: 57 SIV---INNI----GKGSAVRPAKEYSNKVRQIFDRARLFAQKRKKVSASEEDILLAILN 109 Query: 118 SRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKL 177 + +++ I + E + + + + LKK+ +L E AE GK+ Sbjct: 110 DDDSFTNLMFMLSGLDKKIIRDNLIRLQNEEKSSNTSNNLSENLKKFAKNLNEMAEAGKI 169 Query: 178 DPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRV 237 DPVIGR++E+ R IQ+L RRTKNNP+LIG+PGVGKTAI+EGLAQRI++G+VP +K + + Sbjct: 170 DPVIGREDEVERVIQILLRRTKNNPILIGDPGVGKTAIIEGLAQRIVDGKVPFVMKEKTI 229 Query: 238 LALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGN 297 ++LD+ +++AG KYRG+FE+RLK + +L ++E +V+LFIDE H ++GAG ++G+MDA N Sbjct: 230 VSLDLASMIAGTKYRGDFEDRLKKLFGELEQRE-DVVLFIDEFHMVLGAGASEGSMDAAN 288 Query: 298 MLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERY 357 +LKP LA+G++ +GATT+DEYR+++EKD AL RR Q V V EP+ +DTI I+ GLK++Y Sbjct: 289 ILKPILAKGDIQIIGATTIDEYRKHVEKDQALTRRMQPVHVEEPNKDDTIKIIEGLKDKY 348 Query: 358 ELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDR 417 E HH V+IT AI A A+DL + Sbjct: 349 EDHHKVEITGEAIKA-----------------AVDL----------------------SQ 369 Query: 418 RIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKA 477 R IQ + K +D+++E S KER + +K K +S + + Sbjct: 370 RYIQDRF-----------LPDKAIDVIDEACS-KERI-----KNYKENKDQVSNKEILDG 412 Query: 478 ELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRN--KVTDAE 535 +E+ AI +E + K L Q+ A + K + K++ E Sbjct: 413 LIEEKNQAI------------NEQNFEKAASLRDQINEAREKLEKEKEEKKTDLKISFDE 460 Query: 536 IAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPN 595 +A++++ W+ +P++++ E E++K + ++ +L VIGQ++A+D +S+AI+R+R GL DP Sbjct: 461 VAKIVSSWSKVPITKLTEDEKQKYMDLDIDLKKEVIGQDKAIDKISHAIKRARVGLKDPK 520 Query: 596 RPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVG 655 +PIGSF+F+GPTGVGKT L K+LA +F + ++R+DMSE+MEK +VSRLVG+PPGYVG Sbjct: 521 KPIGSFIFVGPTGVGKTYLAKSLAKNLFGDMDNLIRMDMSEYMEKFAVSRLVGSPPGYVG 580 Query: 656 YEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVI 715 YEEGG LTEAVR+ PYSVIL DE+EKAHPD+FN+LLQ+LDDGRLTDGQGRTVDF+NT++I Sbjct: 581 YEEGGQLTEAVRKHPYSVILFDEIEKAHPDIFNLLLQILDDGRLTDGQGRTVDFKNTIII 640 Query: 716 MTSNLGSDLIQER----FG------ELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHP 765 MTSN+G + + FG E+D ++ KE++ + + F PEF+NR+D++++F+ Sbjct: 641 MTSNVGVSSLNQNPKIGFGTGDVEKEIDDSN-KEIINKAIKNAFAPEFLNRLDDIIMFNS 699 Query: 766 LGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQI 825 L + I I +I L +RL+ G EI+ + + LLSE G+ YGARPL+R I +I Sbjct: 700 LDKNAIKEITKILLDETKERLKNLGIEINYNKRVVDLLSEGGFSKEYGARPLERHITNKI 759 Query: 826 ENPLAQQILSGELVPGKVIRLEVNEDRI 853 +N LA++IL G+L I L V E +I Sbjct: 760 DNQLAEEILEGKLSKDMKINLTVKEGKI 787 >UniRef50_C9SIE3 Heat shock protein n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SIE3_VERA1 Length = 744 Score = 607 bits (1564), Expect = e-172, Method: Compositional matrix adjust. Identities = 322/708 (45%), Positives = 453/708 (63%), Gaps = 65/708 (9%) Query: 153 GAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGK 212 G E ++ AL+++ IDLT+RA+ GKLDPVIGRD EI+RTIQ+L RRTKNNPVLIG G GK Sbjct: 72 GGEPEKPALEQFGIDLTQRAKDGKLDPVIGRDSEIQRTIQILSRRTKNNPVLIGNAGTGK 131 Query: 213 TAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGN 272 TAI+EGLA RI+ G+VPE +K +R + ++R + Sbjct: 132 TAILEGLALRIVRGDVPESVKNKR----------SSMRFR---------------RPRAK 166 Query: 273 VILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERR 332 + + + ++DA N+LKPALARGEL C GATTLDEYRQ IEKD AL RR Sbjct: 167 SSSSSTSYTRSLVSARPKASIDASNLLKPALARGELQCCGATTLDEYRQ-IEKDVALARR 225 Query: 333 FQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAID 392 FQ + V EPSV+DTI+ILRG+K+++ LPDKAID Sbjct: 226 FQPIMVNEPSVQDTISILRGIKDKF----------------------------LPDKAID 257 Query: 393 LIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKE 452 L+DEAAS +++Q +SKPE++ LD++I+ +++E ++L KE D AS++R + L +L + Sbjct: 258 LMDEAASHLKLQHESKPEDIMALDQKIMTIQIELESLRKEKDVASRERREKLETDLKALQ 317 Query: 453 RQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQ 512 + L W+ E+A + + + EL++AK+ ++ A+R G+ R EL+Y IP LE++ Sbjct: 318 EEILGLTTRWEKERAEIEAVKNAQEELDKAKVELDVAQREGNFGRAGELRYSVIPFLEEK 377 Query: 513 LEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIG 572 + + + + L+ + VT +IA V++R TGIPVS++ +KL+ ME L V G Sbjct: 378 I--PKEEDKQDGSLIHDSVTADDIAAVVSRITGIPVSKLTSGHIQKLVHMEDALQASVRG 435 Query: 573 QNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRI 632 Q+EA+ AVSNA+R RAGL+ NRP+ SF FLGPTGVGKTELCK LA F+F ++ A+VR Sbjct: 436 QDEAIKAVSNAVRLQRAGLSGDNRPLASFFFLGPTGVGKTELCKKLAGFLFSTESAVVRF 495 Query: 633 DMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQ 692 DMSEF EKH++SRL+GAP GYVGYE+ G LTEAVRR+PY+V+L DE EKAH D+ +LLQ Sbjct: 496 DMSEFQEKHTISRLIGAPSGYVGYEDAGQLTEAVRRKPYAVLLFDEFEKAHRDISALLLQ 555 Query: 693 VLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAH---------MKELVLG 743 VLD+G LTD QG VDFRNT+++ TSNLG+D++ Y +++ V+ Sbjct: 556 VLDEGYLTDAQGHKVDFRNTIIVFTSNLGADILVGANSSHPYTETEDGDVSPDVRKAVMD 615 Query: 744 VVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLL 803 VV+ + PEF+NRID +VF L + + I I+L+ L RL++R +++S + L Sbjct: 616 VVASAYPPEFLNRIDSFIVFKRLAKMALRDIVDIRLRELQARLDDRRITLNVSSDVRDWL 675 Query: 804 SENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNED 851 +E GYDP +GARPL R I +I N LA +I+ GEL G+ + + ED Sbjct: 676 AERGYDPRFGARPLNRLITNEIGNGLADRIIRGELKMGETAEVVIKED 723 >UniRef50_Q8SQU0 HSP 101 RELATED PROTEIN n=2 Tax=Apansporoblastina RepID=Q8SQU0_ENCCU Length = 851 Score = 606 bits (1562), Expect = e-171, Method: Compositional matrix adjust. Identities = 347/861 (40%), Positives = 528/861 (61%), Gaps = 44/861 (5%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M + T + Q AL AL ++N IEP HL+ A+L+ + + +L+ Sbjct: 1 MTTRKYTERAQNALKMCVDEALANNNNTIEPEHLLKAILSDQTSVLHNVLSPTE------ 54 Query: 61 RTDINQAL-NRLPQVEGTGGDVQP--SQDLVRVLNLCDKLAQKRGDN-FISSELFVLAAL 116 R ++ AL R+ +P + L +VL A+ +G+ ++S VL+ L Sbjct: 55 RNNVKNALIKRIGGFAKQYNCTEPRVGETLAKVL----MAAESKGEGEYVSVNALVLSLL 110 Query: 117 ESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGK 176 E + ++ A + +I + +E+ + + + A+D + ++ +D+ E+A Q Sbjct: 111 E-----VESIRELIANSEDIRKKVEEQTKNKRFDSRNADDGTDVMSRFAVDMVEQARQNV 165 Query: 177 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRR 236 DPVIGRDEEIRR +++L ++TK+N +L+G+PGVGKTAIV G+AQ I NGE P L+G R Sbjct: 166 FDPVIGRDEEIRRVLEILSKKTKSNAILVGKPGVGKTAIVNGIAQLIANGEAPT-LRGAR 224 Query: 237 VLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAG 296 + +D+G++VAG +RG+FEERLK ++ + G VILFIDE+H ++GAGK DGAMDA Sbjct: 225 IYNVDVGSMVAGTSHRGDFEERLKTLVKEAETTPG-VILFIDEIHIVLGAGKTDGAMDAA 283 Query: 297 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 356 NMLKP LA G + C+GATT DEYR+YIE D A ERRF +V V EPS+ED+I +LRGLK R Sbjct: 284 NMLKPGLAAGTIKCIGATTHDEYRKYIENDPAFERRFVQVVVNEPSIEDSITMLRGLKGR 343 Query: 357 YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 416 E +H V+I D AIV A S +YI++R+LPD AIDL+D A +S+ + ++S+P+E+ Sbjct: 344 LEAYHGVKIADSAIVYAVNSSKKYISNRRLPDVAIDLLDTACASVMIALESEPQEILNQK 403 Query: 417 RRIIQLKLEQQAL----MKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGT 472 + L + + +L ++ DE + K+L + EEL + +EE + +K + Sbjct: 404 SKAWGLDIAKTSLEFDLSQKKDEQTLKKLKEVVEELEKVKASLQPMEEAYLRDKKHIIEA 463 Query: 473 QTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVT 532 + +K +LE K+ + QA R + +L+ IP +E +L+ +LE +++ + + Sbjct: 464 KKLKKKLEDTKLRLAQAERDRNTYVAYDLKTNVIPVIESELK---RLELESVVV----IL 516 Query: 533 DAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLA 592 + +AE+++RWTGI V R+ E E+L+ M + R+ GQ+ AVDA+ ++I +SR GL Sbjct: 517 PSHVAEIISRWTGIDVKRLTIKENERLMEMSSRIKKRIFGQDHAVDAIVDSILQSRVGLD 576 Query: 593 DPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPG 652 D +RP+GSFL LGPTGVGKTEL KA+A +FD+++ M+ IDMSE+ + +++L+GA G Sbjct: 577 DDDRPVGSFLLLGPTGVGKTELAKAVAMELFDNEKDMLVIDMSEYGNEMGITKLIGANAG 636 Query: 653 YVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNT 712 YVGY +GG LTE ++ RPY+VILLDEV+ AH V N L Q+LD+GR+TDG+G VDFRN Sbjct: 637 YVGYNQGGTLTEPIKGRPYNVILLDEVDLAHQTVLNTLYQLLDEGRVTDGKGAVVDFRNC 696 Query: 713 VVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIA 772 VVIMTSNLG ++I GEL+ K+ + +V + F F+NRIDEV+ F+ L +++ Sbjct: 697 VVIMTSNLGQEIIMRSRGELNDDERKK-IEEIVLNRFGAPFVNRIDEVLYFNNLDRENMH 755 Query: 773 SIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQ 832 I + Q+ L K+L RG +SD + + +YGAR L+R I+ + L Sbjct: 756 RILEYQMGYLEKKLRGRGITFKVSDAVKEDMVTKVLSSIYGARQLRRFIRSSFKRALT-- 813 Query: 833 ILSGELVPGKVIRLEVNEDRI 853 KV+ + VNED I Sbjct: 814 ---------KVLLMRVNEDPI 825 >UniRef50_D1PA52 Negative regulator of genetic competence n=1 Tax=Prevotella copri DSM 18205 RepID=D1PA52_9BACT Length = 892 Score = 604 bits (1558), Expect = e-171, Method: Compositional matrix adjust. Identities = 321/712 (45%), Positives = 448/712 (62%), Gaps = 84/712 (11%) Query: 160 ALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGL 219 + K++ DLT+ A +GKLDPV+GR++EI+R +++L RR KNNPVLIGEPGVGK+AIVEGL Sbjct: 238 TIDKFSFDLTKAAAEGKLDPVVGREKEIQRVLEILGRRKKNNPVLIGEPGVGKSAIVEGL 297 Query: 220 AQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDE 279 AQ I N E +R+++LD+ A+VAG K+RG+FEER+K V+ +L + +I+FIDE Sbjct: 298 AQLINNQETSPMFFNKRLVSLDLTAIVAGTKFRGQFEERIKNVIKEL-ENHPEIIIFIDE 356 Query: 280 LHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVA 339 +HTM+GAG +G+MDA N+LKPALARG + C+GATTLDEYR+ IEKD ALERRFQKV V Sbjct: 357 IHTMIGAGSGEGSMDAANILKPALARGIIQCIGATTLDEYRKSIEKDGALERRFQKVLVE 416 Query: 340 EPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAAS 399 + E+T+ IL +K+ YE HH V+ TD A+ A L+ RYI DR PDKAID+IDEA S Sbjct: 417 PTTREETLLILHNIKQHYEKHHCVRYTDEALEACVKLTERYITDRHFPDKAIDVIDEAGS 476 Query: 400 SIRMQIDSKPEELDRLDRRIIQL-KLEQQALMKESDEASKKRLDMLNEELSDKERQYSEL 458 + + S P +L++ + ++ +QQA+ ++ E + Sbjct: 477 RVHINNASVPAPYIKLEKELKKIISKKQQAVANQNFEMA--------------------- 515 Query: 459 EEEWKAEKASLSGTQT-IKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAAT 517 AS QT I+ E+E K ++ Q G+I E + Sbjct: 516 --------ASCRDAQTKIEKEIEDMK---------------AQWQQGEIGEYVE------ 546 Query: 518 QLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAV 577 VT +IA V++ TG+P RM E E ++L +E L H+VI Q+ A+ Sbjct: 547 -------------VTAEDIANVISMMTGVPAQRMAEGESKRLKDLEHNLKHKVIAQDNAI 593 Query: 578 DAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEF 637 + + I R+R GL DPN PIG F+FLGPTGVGKT L + LA MF S ++++RIDMSEF Sbjct: 594 NKMVKTILRNRVGLRDPNHPIGVFMFLGPTGVGKTYLAQKLAEEMFGSKDSLIRIDMSEF 653 Query: 638 MEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDG 697 E + SRLVGAPPGYVGY EGG LTE VRR+PYS++LLDE+EKA+ VFN+LLQVLD+G Sbjct: 654 SESFNTSRLVGAPPGYVGYNEGGQLTEKVRRKPYSIVLLDEIEKANSKVFNLLLQVLDEG 713 Query: 698 RLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFG-----------------ELDYAHMKEL 740 RLTDG GR +DFRNT++IMTSN G+ +++ FG E D + + + Sbjct: 714 RLTDGNGRLIDFRNTIIIMTSNAGTRQLKD-FGRGVGFTSAGIKGGLAMDEKDKEYARSI 772 Query: 741 VLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEAL 800 V +S F PEF+NR+D+++ F L I I + L+ L KR+EE G+ I+++A Sbjct: 773 VQKSLSKQFAPEFLNRLDDIITFDQLDLNAIKRIIDLDLEGLVKRIEELGFHFQITEKAK 832 Query: 801 KLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDR 852 +++++ GYD +GARPL+RAIQ IE+ + + +L G + PG I + N + Sbjct: 833 EMVAKKGYDVQFGARPLRRAIQTYIEDSVCEMLLDGTMKPGDTISVGKNSKK 884 >UniRef50_C7H8Y8 Clp protease, ATP-binding subunit ClpC n=3 Tax=Clostridiales RepID=C7H8Y8_9FIRM Length = 767 Score = 603 bits (1554), Expect = e-170, Method: Compositional matrix adjust. Identities = 322/701 (45%), Positives = 442/701 (63%), Gaps = 68/701 (9%) Query: 157 QRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIV 216 +R+ L Y +LT +A +GKLD +IGRD EI RTIQ+L RR KNNP LIGE GVGKTAI Sbjct: 130 RRKFLDTYCENLTRKAREGKLDDIIGRDREIYRTIQILSRRQKNNPCLIGEAGVGKTAIA 189 Query: 217 EGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILF 276 EG+A+RI G+VP GL+ + + LD+ +LVAG ++RG+FE+R+KG+L+++ K GNVILF Sbjct: 190 EGIAERIAKGQVPAGLQDKEIFLLDLTSLVAGTQFRGQFEQRVKGLLSEV-KAAGNVILF 248 Query: 277 IDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKV 336 IDE+HT+ AG+++GAM+AGN+LKPAL+RGE+ +GATT +EYR+YIEKD ALERRFQ V Sbjct: 249 IDEIHTITSAGESEGAMNAGNILKPALSRGEIQVIGATTFNEYRKYIEKDQALERRFQPV 308 Query: 337 FVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDE 396 V EPSV DT+A++ G+K YE HHHVQ+ + A TLS RYI DR LPDKAIDL+DE Sbjct: 309 RVEEPSVADTLAVMGGIKHYYEEHHHVQVPADVLNATVTLSERYITDRYLPDKAIDLLDE 368 Query: 397 AASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYS 456 A + L +I L Q K L+ L +E +D E + Sbjct: 369 ACACCN------------LAHPVISEYLTMQ-----------KELEALKQEEADMEN--A 403 Query: 457 ELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAA 516 ++ E E+ + T ++ +LE++L A Sbjct: 404 DVNEPIDYERVAERKT--------------------------------RMAQLERELPAK 431 Query: 517 TQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEA 576 G+ +VT ++A+V+ WTGIP ++ E+E KL +E EL ++IGQ++A Sbjct: 432 QAAAGEI------QVTMDDVAKVIELWTGIPAVKIRETEYAKLASLETELKKKIIGQDDA 485 Query: 577 VDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSE 636 V V+ A++RSRA L+ RP SF+F+GPTGVGKTEL K LAN +FD + ++R+DMSE Sbjct: 486 VHLVAQAVKRSRADLSGRRRP-ASFIFVGPTGVGKTELVKQLANQLFDGPDPLIRLDMSE 544 Query: 637 FMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDD 696 +MEK++VSR++G+PPGYVGYEE G LTE VRRRPYSV+L DE+EKAHPDV NILLQ+LD+ Sbjct: 545 YMEKYAVSRMIGSPPGYVGYEEAGQLTEKVRRRPYSVVLFDEIEKAHPDVMNILLQILDE 604 Query: 697 GRLTDGQGRTVDFRNTVVIMTSNLGSD---LIQERFGELDYAHMKELVLGVVSHNFRPEF 753 G++ D QGRTVDF NTV+ MTSN GS F + +E +S RPEF Sbjct: 605 GKINDAQGRTVDFSNTVICMTSNAGSSDQTTASLGFNRSEEERNEEKSRKALSQFLRPEF 664 Query: 754 INRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYG 813 + R+DEV+ F PL E+ + IA + L +E +G + AL L +G Sbjct: 665 LGRVDEVITFKPLSEETLQGIAALMLDEYKPSMEAKGIAYSYTPAALAALVHKSQGGKFG 724 Query: 814 ARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIV 854 AR L+R I++ +E+P A++I+ G LV G + ++ D IV Sbjct: 725 ARDLRRTIRKAVEDPAAEKIIDGTLVSGSTLTVDAENDEIV 765 >UniRef50_A6NVT1 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NVT1_9BACE Length = 858 Score = 600 bits (1548), Expect = e-170, Method: Compositional matrix adjust. Identities = 345/743 (46%), Positives = 479/743 (64%), Gaps = 27/743 (3%) Query: 120 GTLADILKAAGATTANITQAIEQMRGGESVNDQGAE--DQRQALKKYTIDLTERAEQGKL 177 T + K G + +Q E+ R E N+ G E +R+ L+ Y I LT++A +GKL Sbjct: 111 ATFPFLNKLFGGSQGGDSQPREESRPREEKNN-GKERAPKRKFLENYCISLTQKAAEGKL 169 Query: 178 DPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRV 237 D ++GRD+EI RTIQ+L RR KNNP LIGEPGVGKTAI EGLA RI G+VP L+ + V Sbjct: 170 DNIVGRDQEIERTIQILNRRQKNNPCLIGEPGVGKTAIAEGLALRIHEGKVPYKLQDKEV 229 Query: 238 LALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGN 297 LD+ ALVAG ++RG+FE R+KG+++++ K+ GN+IL IDE+H +VGAG A+G+M+A N Sbjct: 230 YLLDLTALVAGTQFRGQFESRMKGLIDEV-KKLGNIILVIDEVHNIVGAGDAEGSMNAAN 288 Query: 298 MLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERY 357 +LKPAL+RGE+ +GATTL EYR+YIEKD+ALERRFQ V V EPS+ED + I+ G+K Y Sbjct: 289 ILKPALSRGEIQVIGATTLTEYRKYIEKDSALERRFQPVIVEEPSIEDAVQIIMGIKSYY 348 Query: 358 ELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDR 417 E +H V I+ A T+S RYI DR LPDKAIDLIDEA S + + + E +L + Sbjct: 349 EKYHFVSISPEMARLAVTMSERYITDRYLPDKAIDLIDEACSDVNLHNANLAREA-QLKK 407 Query: 418 RIIQLKLEQQALMKESDEASKKRLDML--NEEL-SDKERQYSELEEEWKAEKASLSGTQT 474 + + E++AL+ E++ KR L NE ++ R+ ++L E++ A+ Sbjct: 408 DLEAISKEREALVAEANSRDFKRQSDLKANENRQAEIRRELNKLTEQYSVLSAAGDQEAG 467 Query: 475 IK-AELEQAKIAIEQARRVGDLARMS---------ELQYGKIPELEKQLEAATQLEGKTM 524 +K E EQA++ E + V D + ++ L K EL+ Q E +LE ++ Sbjct: 468 MKDNEREQARLQRELQKLVQDRSALNAATGDEDYQRLAVIKSRELQLQQEL-DKLEAQSA 526 Query: 525 RLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAI 584 L T A +A V+ WT IP S++ E+E E+L ++E L +IGQ++AV AV+ A+ Sbjct: 527 PPL----TVAHLARVIELWTKIPASQIQEAEYERLAQLENRLKEHIIGQDDAVKAVAAAV 582 Query: 585 RRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVS 644 RR R G+A +P+ SF+F+G TGVGKTEL K LA MF S E+++R+DMSEFMEK +VS Sbjct: 583 RRGRVGIASKRKPV-SFIFVGSTGVGKTELVKRLAMDMFHSPESLIRLDMSEFMEKFAVS 641 Query: 645 RLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQG 704 R++G+PPGYVGY+E G LTE VRR+PY VIL DE+EKAHPDV NILLQ+LDDG +TD QG Sbjct: 642 RIIGSPPGYVGYDEAGQLTEKVRRKPYCVILFDEIEKAHPDVLNILLQILDDGHITDAQG 701 Query: 705 RTVDFRNTVVIMTSNLGSDLIQE---RFGELDYAHMKELVLGVVSHNFRPEFINRIDEVV 761 R V+F NTV++MTSN GS+ FG +E + + RPEFINR+DE+V Sbjct: 702 RNVNFENTVIVMTSNAGSEAKGSGSVGFGRTAAEQGRERAMKALESFLRPEFINRVDEIV 761 Query: 762 VFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAI 821 F+ L E++ +IA I L L L E+G D L L + Y YGAR L+R I Sbjct: 762 YFNKLSEENFKAIAGIMLGELKGTLAEKGITFTYDDSLLDYLVKKSYSLTYGARNLRRQI 821 Query: 822 QQQIENPLAQQILSGELVPGKVI 844 Q+ +E+P+A +I+ L P + + Sbjct: 822 QKDLEDPIATRIIESYLNPVRTL 844 >UniRef50_A0K1M3 ATPase AAA-2 domain protein n=6 Tax=Bacteria RepID=A0K1M3_ARTS2 Length = 857 Score = 599 bits (1545), Expect = e-169, Method: Compositional matrix adjust. Identities = 369/877 (42%), Positives = 508/877 (57%), Gaps = 97/877 (11%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 L R T++ L+LA ++ LGH + ++ LH++ + E + + AG + Sbjct: 41 LSRRTHEV-LSLAGQFAVDLGHGD--VDALHILRTMAGAE--PATSYMRRAGADP---AA 92 Query: 63 DINQALNRLPQVEGTGGDVQP--SQDLVRVLNLCDKLAQKRGDNFISSE-LFVLAALESR 119 A RLP+ G P + R L ++A+ G +I E LF L Sbjct: 93 VARAAEERLPEKSGRAATSAPALTPSAQRALLDAYQVARAFGSTYIDPEHLFFALVLNQD 152 Query: 120 GTLADILKAAGATTANITQAIEQMRGGE-----------SVNDQGAEDQRQALKKYTIDL 168 +L AAG T + + G E S + G L Y DL Sbjct: 153 APAGQVLAAAGVTPESFQAGARETSGTEPSGAGAPDAAASASGTGTAAATPMLDTYGTDL 212 Query: 169 TERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEV 228 T A G LDPVIGR +E +TI+VL RRTKNNPVLIGE GVGKTAIVEGLAQ I G V Sbjct: 213 TALARSGGLDPVIGRSDETAQTIEVLARRTKNNPVLIGEAGVGKTAIVEGLAQAIAAGTV 272 Query: 229 PEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMV-GAG 287 PE L+ +RV++LD+ A++AG +YRG+FEERL ++++ G ILFIDELHT++ G Sbjct: 273 PEQLRNKRVISLDLPAMLAGTRYRGDFEERLTKAMDEVTANPGQFILFIDELHTVIGAGG 332 Query: 288 KADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTI 347 +G MDAGN+LKP LARGELH VGATT +EYR+ +EKD A ERRFQ V V EP+VED + Sbjct: 333 AGEGGMDAGNILKPRLARGELHVVGATTFNEYRK-VEKDPAFERRFQPVQVGEPAVEDAV 391 Query: 348 AILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDS 407 IL GL+ERYE HH V+ TD A+ AA LS RY+ DR LPDKAIDL+D+A + + +++ S Sbjct: 392 QILSGLRERYEEHHGVRYTDEAVRAAVELSARYVTDRFLPDKAIDLMDQAGARLSLKLGS 451 Query: 408 KPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKA 467 + ++ L R++ L+ + A + D + RL + + L+E+ A Sbjct: 452 R-QDAAALRERLVALEESKTAAIAAEDFEAASRL----------RDEANALKEKLDGGAA 500 Query: 468 SLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLL 527 S G + A + +A+IA +R G IP A+ EG RL Sbjct: 501 SQEGPGSESAVVGEAEIAEIISRATG------------IP-------ASRITEGDRERLA 541 Query: 528 RNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRS 587 R +E++LH RV+GQ +AV ++ ++RR+ Sbjct: 542 R---------------------------------LEEDLHQRVVGQEDAVSLIAKSVRRN 568 Query: 588 RAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLV 647 R G+ RPIGSFLFLGPTGVGKTEL KALA +F S+++M+R DMSEF E+H+VSRLV Sbjct: 569 RTGMGAAGRPIGSFLFLGPTGVGKTELAKALAGSLFGSEDSMIRFDMSEFGERHTVSRLV 628 Query: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTV 707 GAPPGYVGY+E G LTE VRR PYS++LLDEVEKAHPDVFN+LLQVLDDGRLTDG GRTV Sbjct: 629 GAPPGYVGYDEAGQLTERVRRNPYSIVLLDEVEKAHPDVFNLLLQVLDDGRLTDGHGRTV 688 Query: 708 DFRNTVVIMTSNLGSDLIQERFGELDYA----------HMKELVLGVVSHNFRPEFINRI 757 DFRNTVVIMTSNLGS+ + + G + +++ VL + + RPEF+NRI Sbjct: 689 DFRNTVVIMTSNLGSEFLASKAGPTGFTAAGDAFGSEKALRDRVLARLRESMRPEFLNRI 748 Query: 758 DEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPL 817 DE+V+F L + I ++ L RL +G + +S++A+ ++E GY+P YGARP+ Sbjct: 749 DEIVLFRKLDRAQLRQIVRLMLDETDARLRSQGIGLVVSEDAVDWIAERGYEPEYGARPM 808 Query: 818 KRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIV 854 +R IQ+++++ +A ++ L G + + + +V Sbjct: 809 RRVIQRELDDRIADLLVGSGLAAGGQVTVSADGPELV 845 >UniRef50_C9LKK9 Negative regulator of genetic competence ClpC/MecB n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LKK9_9BACT Length = 866 Score = 597 bits (1539), Expect = e-169, Method: Compositional matrix adjust. Identities = 350/884 (39%), Positives = 510/884 (57%), Gaps = 105/884 (11%) Query: 14 LADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDI-NQALNRLP 72 L +++ A+ ++ L L LL+ ++ LL S G++ LR I +Q + Sbjct: 37 LTYSKTEAIRFKQPIVDELCLFLGLLHNGNSRIADLLRSTGVSIEALRDAIEHQFTVSVE 96 Query: 73 QVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGT----------- 121 ++ ++ ++ R+L L A++ G + +LA L + Sbjct: 97 TLDAVSDNIILNETCRRILRLSVLEARRAGSKMADEDHLLLAILRDKDNKCLPILHQNNI 156 Query: 122 ----LADILKAAGATTANITQAIEQMRGGESVNDQG--------AEDQRQA----LKKYT 165 +A +L +A A E G QG D++ + + + Sbjct: 157 TYSGIASLLNPTSEVSAGFGVADEAPEGFPDEKPQGDYKHSETKTRDKQTSDTPVIDNFG 216 Query: 166 IDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIIN 225 DLT+ A LDPVIGR+ EI+R Q+L RR KNNP+LIGEPGVGK+A+VEGLA II+ Sbjct: 217 TDLTKLAADEALDPVIGRENEIQRIAQILSRRKKNNPILIGEPGVGKSAVVEGLANLIIS 276 Query: 226 GEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVG 285 G+VP L+ RR+++LDM ++VAG +YRG+FE+RL+ ++ +L + +ILFIDE+HT++G Sbjct: 277 GKVPRILQHRRIVSLDMASIVAGTQYRGQFEDRLQRLIKEL-RAHSEIILFIDEIHTIIG 335 Query: 286 AGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVED 345 AG A G++DA N+LKPALARGE+ C+GATT DEYR+ IEKD ALERRFQK+ +A + E Sbjct: 336 AGSAPGSLDAANILKPALARGEIQCIGATTTDEYRKTIEKDGALERRFQKIQLAPTTPEQ 395 Query: 346 TIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQI 405 T+ ILR LK+RYE HH+V TD A+ A L+ RYI+ R LPDKAID +DEA S + + Sbjct: 396 TLEILRNLKKRYEEHHNVAYTDDALHACVNLTTRYISGRALPDKAIDALDEAGSRVHISG 455 Query: 406 DSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAE 465 PE +++L++ I LK + EA+K Q EL + E Sbjct: 456 VKVPENIEKLEKCIADLK-------RHKTEAAKA--------------QNYELAANLRDE 494 Query: 466 KASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMR 525 A L+ +LE A + +++ Sbjct: 495 VAQLT----------------------------------------DKLEHANKDWIDSLK 514 Query: 526 LLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIR 585 R VT +I+ +++ +GIPV RM + E +L M+ L +VI Q+EA+ + AI Sbjct: 515 EDRPTVTAEDISTIVSMMSGIPVQRMAQDESIRLKGMKAALQAKVISQDEAISHLVRAIT 574 Query: 586 RSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSR 645 R+R GL +RPIG+FLF+GPTGVGKT L K LA +MF S E ++RIDMSE+ EK+S SR Sbjct: 575 RNRLGLKGTDRPIGTFLFVGPTGVGKTYLVKCLAEWMFGSKEDLIRIDMSEYGEKYSTSR 634 Query: 646 LVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGR 705 LVGAPPGYVGY+EGG LTE VRR PYSVILLDE+EKAHPDVFN LLQV+D+GRLTDG G Sbjct: 635 LVGAPPGYVGYDEGGQLTEKVRRHPYSVILLDEIEKAHPDVFNTLLQVMDEGRLTDGNGT 694 Query: 706 TVDFRNTVVIMTSNLGSDLIQERFG-----------ELDYAHMKELVLGVVSHNFRPEFI 754 TVDFRNT++IMTSN G+ +++ FG + D +++++ + F PEF+ Sbjct: 695 TVDFRNTIIIMTSNSGTRQLKD-FGRGIGFKEAATDDADGKMVEQIIRKALQKQFSPEFL 753 Query: 755 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 814 NR+D+++ FHPL E IA +++ L +RLE+ + ++ A + + G++ YGA Sbjct: 754 NRLDDIITFHPLTEADAGKIADLEIGALKERLEKMQLSLELTTAAKDYVVKKGFNVQYGA 813 Query: 815 RPLKRAIQQQIENPLAQQILS---GELVPGKVIRLEVNEDRIVA 855 R LKR+IQ IE+ + I++ + + IR +V ++++VA Sbjct: 814 RSLKRSIQANIEDAICDLIMNETQDKTEQPQTIRFDVVDEKLVA 857 >UniRef50_C1SG60 ATPase with chaperone activity, ATP-binding subunit n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SG60_9BACT Length = 802 Score = 595 bits (1535), Expect = e-168, Method: Compositional matrix adjust. Identities = 330/839 (39%), Positives = 504/839 (60%), Gaps = 79/839 (9%) Query: 29 IEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQALNRLPQVEGTGGDVQPSQDLV 88 I+ H++ LL + G + + + GI+ L D+ + ++ G + SQ+ Sbjct: 28 IDTEHILLGLLRERSGLAAEIFSRRGIDVSMLMNDV-KGVSEKGHNLMIKGSLPFSQNGK 86 Query: 89 RVLNLCDKLAQKRGDNFISSELFVLAAL-ESRGTLADILKAAGATTANITQAIEQMRGGE 147 VL+ + A+ + ++++E +L L E +G + +L G + + I+ + Sbjct: 87 NVLDFSVEEAKNLKNKYVNTEHILLGLLKEKKGKASMLLSKLGFDLVTLREEIQTVSKSY 146 Query: 148 SVN-DQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIG 206 + N DQ L ++ DLT+ A GKLDPVIGR EI R IQ+L RR KNN V+IG Sbjct: 147 AKNTDQAVT---PTLDEFGRDLTKLAMDGKLDPVIGRSTEITRLIQILGRRIKNNAVIIG 203 Query: 207 EPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDL 266 EPGVGKTAIVEGLA ++ + +VP+ L+ +R+ +L++G +VAG KYRG+FEER+K ++ ++ Sbjct: 204 EPGVGKTAIVEGLALKMASEDVPDFLRNKRLFSLELGNVVAGTKYRGQFEERMKNLIKEI 263 Query: 267 AKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKD 326 + +GNVI+FIDE+HT+VGAG A+G++DA NMLKPALARG C+GATTL E+R+ EKD Sbjct: 264 -ETDGNVIIFIDEIHTIVGAGAAEGSIDASNMLKPALARGVFQCIGATTLSEFRKNFEKD 322 Query: 327 AALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQL 386 AL RRFQ + V +P ++T+ IL G+K YE H V I + L+ RYI ++ Sbjct: 323 GALNRRFQTISVDQPDADETVQILDGIKRFYEDFHKVFIPHDVLEEITRLTDRYITEKFQ 382 Query: 387 PDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNE 446 PDK+ID++DEA S +++ + P+++ R+ ++ QLK + ++ +D Sbjct: 383 PDKSIDVLDEACSRLKLATRTMPDDMVRIKNKLEQLKGLRDEKLRAND------------ 430 Query: 447 ELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKI 506 D ++YS+ E W A K S++ Sbjct: 431 --YDNIQKYSKDVERW-ATKLSVA------------------------------------ 451 Query: 507 PELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQEL 566 +K+ E L+ T+ T I+EV+A TG+PV ++ + ++ +++++ Sbjct: 452 ---QKEWEEELDLDWPTL-------TIENISEVVAHMTGVPVQKLQTDDMARIANIDKDI 501 Query: 567 HHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSD 626 +IGQ+EAVDA+S +++RS AGL++P RP+GSF+F+GPTGVGKTE+ K LA +F S+ Sbjct: 502 KEFIIGQDEAVDALSRSVKRSFAGLSNPARPLGSFIFMGPTGVGKTEVAKKLAETVFGSE 561 Query: 627 EAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDV 686 +++RIDM+E+ME+ + SRL+GAPPGYVGYEEGG LTE VRR+PYSV+L DE+EKAHP+V Sbjct: 562 SSLIRIDMTEYMERFNSSRLIGAPPGYVGYEEGGKLTEQVRRKPYSVVLFDEIEKAHPEV 621 Query: 687 FNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGS-----------DLIQERFGELDYA 735 NILLQ+LDDG + D G V+F+NT++IMTSNLG+ D +E E+DY Sbjct: 622 LNILLQILDDGHINDSLGHKVNFKNTIIIMTSNLGTKLSMNRKTLGFDTKEESNNEIDYD 681 Query: 736 HMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHI 795 + F PEFINR+D +VVF PLG+ + I +QL + KRLE G ++ I Sbjct: 682 VFSTNAHRELKDRFPPEFINRVDSLVVFKPLGKAELIEIIDLQLIEINKRLEIAGKQLTI 741 Query: 796 SDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIV 854 + + L Y+ YGARP+KR +Q +IE+PL++ +L G+ K +++++ D IV Sbjct: 742 DQDVKEHLLSGEYEYSYGARPIKRLLQSKIEDPLSEILLEGKFAKRKNLKVKMINDEIV 800 >UniRef50_C7RF24 ATPase AAA-2 domain protein n=1 Tax=Anaerococcus prevotii DSM 20548 RepID=C7RF24_ANAPD Length = 834 Score = 595 bits (1535), Expect = e-168, Method: Compositional matrix adjust. Identities = 328/845 (38%), Positives = 532/845 (62%), Gaps = 27/845 (3%) Query: 9 KFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQAL 68 K +A+ +A++LAL + NQ + LHL+ ++ +QE + +L ++ L +I +A+ Sbjct: 8 KASMAIKEARNLALLNKNQEVTDLHLLKSVTDQENHVLDTMLEEFSVDKDNLTDEITKAI 67 Query: 69 NRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKR-GDNFISSELFVLAALESRGTLADILK 127 +L +G + S+D R L L + A+KR + +S LF+ + T IL+ Sbjct: 68 GKLRSNDGLSK-LYFSRDYQRTLLLAKENAKKRYAEKITTSHLFLAFFDLEKTTSKHILE 126 Query: 128 AAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEI 187 G + Q + +++ +E + KY IDLT+RA++GK+DPVIG D E+ Sbjct: 127 KVGLSHEKCEQYLVNKEKEVENSERFSEKIGDLIDKYGIDLTKRAKEGKIDPVIGMDYEV 186 Query: 188 RRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVA 247 R ++L RR KNNP+LIGEPGVGK+A+VEGLA +I G+V + LK + + +L++ +++A Sbjct: 187 DRLSEILTRRIKNNPILIGEPGVGKSAVVEGLALKIAQGDVVDFLKDKIIFSLNVSSVLA 246 Query: 248 GAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGE 307 G RGEFE R+K +++ + EG +ILFIDE+HT+VGAG + G +D N++KP L+RGE Sbjct: 247 GTGLRGEFESRVKDLMDIVTSFEGKIILFIDEIHTIVGAGSSSGGIDISNIIKPKLSRGE 306 Query: 308 LHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITD 367 + +GATT+ EYR +IEKD ALERRFQK+ + E S+E++ ILRG+K YE H++ ITD Sbjct: 307 ITIIGATTVAEYRSHIEKDGALERRFQKILIKEASIEESYDILRGIKTNYENFHNLIITD 366 Query: 368 PAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQ 427 AI A LS RYI DR+LPDKAIDL+DEAAS ++ ++++ P+ LD L I++L ++ Sbjct: 367 EAIKACVDLSDRYITDRKLPDKAIDLMDEAASMLKNKLENTPDSLDDLREDILEL---EE 423 Query: 428 ALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIE 487 +L ++D+ + +LD L ++L DK+ + + E E L + I++++ + + Sbjct: 424 SLQLKADDKKENKLDEL-KKLYDKDLEIKQEETE------DLRDLRRIRSDIRELVFIKK 476 Query: 488 QARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIP 547 + +++ K+PEL+K E + L K + K+ ++ I +++R T IP Sbjct: 477 RLLNEDKFEEYTKITKVKLPELKK--EEKSYLNKKYEFVKIEKLEESHIKTLISRITKIP 534 Query: 548 VSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPT 607 V + + +EK+L +++ L +VIGQ EAV+ +SNAI R+ G+ + ++PIG+FLF G T Sbjct: 535 VEDLNQDRKEKILNIDKALGKKVIGQQEAVEKISNAIIRTAVGMKNRHKPIGTFLFTGNT 594 Query: 608 GVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVR 667 G+GKT L K LA+ +++ +E+++R DMSE+M+ +S ++ +GAPPG+VGYEEGG LTE VR Sbjct: 595 GLGKTYLAKVLADTLYEGEESLIRFDMSEYMDSNSTTKFIGAPPGFVGYEEGGQLTEKVR 654 Query: 668 RRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE 727 PYSVIL DE+EKA+ +F+ILLQ+LD+GRLTD +G T+DF NT++I+TSN+ L +E Sbjct: 655 INPYSVILFDEIEKANKQIFDILLQILDEGRLTDNRGITIDFTNTIIILTSNI---LAKE 711 Query: 728 RFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLE 787 +L Y H + F+PEFINR+D +V F+ L + + I +I L+ + Sbjct: 712 DDSDL-YKHE-------LYQYFKPEFINRLDAIVKFNTLSYEDLMEITKIYLEEVKNDFG 763 Query: 788 ERGYEIHISDEAL-KLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRL 846 E G ++E + K++ + Y+ +GAR ++R + +I ++++IL +L V+ + Sbjct: 764 EIGVNFAYTNEVIEKIVDLSDYEE-FGAREIRRVVDDKIVTMVSRKILQDDLDSTNVLTI 822 Query: 847 EVNED 851 + +D Sbjct: 823 MLEDD 827 >UniRef50_C4RIQ4 ATPase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RIQ4_9ACTO Length = 832 Score = 592 bits (1526), Expect = e-167, Method: Compositional matrix adjust. Identities = 308/533 (57%), Positives = 398/533 (74%), Gaps = 11/533 (2%) Query: 324 EKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIAD 383 EKD ALERRFQ V V EP++ DTI ILRGLKERYE+HH V+ITD A+VAAA LS RYI D Sbjct: 295 EKDPALERRFQPVLVGEPTIADTIGILRGLKERYEVHHGVRITDAALVAAAALSDRYITD 354 Query: 384 RQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDM 443 R LPDKAIDL+DE+AS +RM+IDS+P E+D ++R + +L++E+ AL KE D AS +RL+ Sbjct: 355 RFLPDKAIDLVDESASRLRMEIDSRPVEVDEIERAVRRLEIEEMALAKEPDAASAERLER 414 Query: 444 LNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQY 503 L +EL+DK Q + L E W+ EK+ ++ T K ELE+ E+A R G+L R +EL+Y Sbjct: 415 LRKELADKREQLTALSERWQTEKSHITKLSTAKEELERLGGEAERAERDGELERAAELRY 474 Query: 504 GKIPELEKQLEAAT------QLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESERE 557 G+IP L+ L A Q +G +L+ +V +IA V+A WTGIP R++E E Sbjct: 475 GRIPALKNDLAKAEEELARLQADGA---MLKEEVGADDIATVVASWTGIPAGRLLEGETA 531 Query: 558 KLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKA 617 KLLRME+ L RV+GQ EAV AVS+A+RR+RAG+ADP+RP GSFLFLGPTGVGKTEL KA Sbjct: 532 KLLRMEESLGARVVGQTEAVSAVSDAVRRARAGVADPDRPTGSFLFLGPTGVGKTELAKA 591 Query: 618 LANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLD 677 LA F+FD + AMVRIDMSE+ EKHSV+RLVGAPPGYVGYEEGG LTEAVRRRPYSVILLD Sbjct: 592 LAEFLFDDERAMVRIDMSEYGEKHSVARLVGAPPGYVGYEEGGQLTEAVRRRPYSVILLD 651 Query: 678 EVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHM 737 EVEKAHPDVF++LLQVLDDGRLTDGQGRTVDFRN ++I+TSNLGS +I + L Sbjct: 652 EVEKAHPDVFDVLLQVLDDGRLTDGQGRTVDFRNAILILTSNLGSSMISDLT--LAEEQR 709 Query: 738 KELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISD 797 +E VL VV +F+PEF+NR+D++VVF L + +I IQL R+ RL +R + +S+ Sbjct: 710 REGVLAVVRSHFKPEFLNRLDDIVVFAALLGDDLRAIVDIQLDRMRARLADRRLALDVSE 769 Query: 798 EALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNE 850 A L+E+GYDP+YGARP++R +Q I + LA+ +LSG + G +++++ + Sbjct: 770 AARGWLAEHGYDPIYGARPVRRLVQSAIGDQLARALLSGAIRDGDTVQVDLAD 822 >UniRef50_Q3LW37 ATP binding subunit of Clp protease n=1 Tax=Bigelowiella natans RepID=Q3LW37_BIGNA Length = 897 Score = 587 bits (1514), Expect = e-166, Method: Compositional matrix adjust. Identities = 329/830 (39%), Positives = 487/830 (58%), Gaps = 88/830 (10%) Query: 53 AGINAGQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFV 112 A I A ++R+D+ LP+ + R+L+ ++ A G I + V Sbjct: 122 ARIEADKIRSDLTNLFGELPETYSFDDEAH------RILDYAERYANFFGLVQIETIHVV 175 Query: 113 LAALE-SRGTLADILKAAGATTANITQAIEQMRGGESV--NDQGAEDQRQA--------- 160 +A R I++ ++ + ++ +R S+ + +G Q Q Sbjct: 176 MAMFRYKRSNAYRIIETITPNFESLEEIVDNIRPNISLKRDSKGFIYQAQKSELPELDPE 235 Query: 161 ----LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIV 216 + + +DLTE+AE G+ DPVIGR +EI R I+VL R++KNNP L+G+PGVGKTAI Sbjct: 236 SEDIIDTFGVDLTEKAEFGEGDPVIGRKKEIDRLIRVLARKSKNNPCLVGDPGVGKTAIA 295 Query: 217 EGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILF 276 EGLA RI N EVPE LK +R++ L++ +VAG+KYRG+FE R+ ++ ++A+ E +VILF Sbjct: 296 EGLAYRIWNDEVPEFLKNKRIINLELTKIVAGSKYRGDFESRILSII-EMARFEDSVILF 354 Query: 277 IDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKV 336 IDE+HT++GAG ++G +DA NMLKP L+RGE+ +GATT +E+R+YI+ D ALERRFQ V Sbjct: 355 IDEIHTIMGAGSSEGTLDAANMLKPPLSRGEISLIGATTEEEFRKYIKADGALERRFQAV 414 Query: 337 FVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDE 396 V EP++ + I IL G+K+ + +H V +D AI A S +YI+D+ LPDKAIDL+DE Sbjct: 415 KVPEPTISEAIQILHGIKKNFGNYHGVVYSDEAIEACVKFSKQYISDKFLPDKAIDLLDE 474 Query: 397 AASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYS 456 + + ++M+ + ++ + L+K E K ++ D ++ + Sbjct: 475 SGAFVKMKEGYAIKNIE-----------DYTFLIKSYRETKKAVVE------KDIQKLKA 517 Query: 457 ELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAA 516 L E KA K Q IK E K I R V K+P++E Sbjct: 518 TLITEIKALKKVEQVLQKIKLSQEAIKRDINNIRVV------------KVPDVET----- 560 Query: 517 TQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEA 576 V+ TG+ + + +SE E LL +E LH VIGQ EA Sbjct: 561 ----------------------VIEEMTGVKIKEVSKSESENLLNLESILHKSVIGQEEA 598 Query: 577 VDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSE 636 V AVS A+R+SR GL DP RPI SF+F GPTGVGKTEL K L+ FDS++AM+R DMS+ Sbjct: 599 VTAVSKAMRKSRVGLRDPKRPIASFIFAGPTGVGKTELAKTLSRVYFDSEDAMIRFDMSD 658 Query: 637 FMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDD 696 F EKH+VS+L+G+PPGY+GY +GG LTEAVR+ P+S++L DE+EKAHPDV+ LLQVLDD Sbjct: 659 FAEKHNVSKLIGSPPGYIGYSDGGQLTEAVRKTPHSLVLFDELEKAHPDVYLPLLQVLDD 718 Query: 697 GRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKE---------LVLGVVSH 747 GRL D +G+ VDF+NT++I+TSNLG+ ++ R + + E + ++ Sbjct: 719 GRLADSKGKIVDFKNTIIILTSNLGAKEVEARRKAIKQSSETEDISEKESFSIYNAAIAE 778 Query: 748 NFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENG 807 FRPEF+NRIDE+++F L + + I I + + R + G I ++ +L++E G Sbjct: 779 YFRPEFLNRIDEIIIFKRLTQSQVYEIFAIFMNSVKHRAAKLGITIQETERLRQLVTEAG 838 Query: 808 YDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857 Y P +GARPLKR I + IE+PL++ ILS E+V G + L+ ++ ++ Sbjct: 839 YTPAFGARPLKRTISRLIESPLSEMILSNEVVSGDTVLLDYYNKKVTFIK 888 >UniRef50_B2S3E1 ATP-dependent Clp protease, subunit C n=4 Tax=Treponema RepID=B2S3E1_TREPS Length = 814 Score = 580 bits (1496), Expect = e-164, Method: Compositional matrix adjust. Identities = 358/873 (41%), Positives = 495/873 (56%), Gaps = 101/873 (11%) Query: 4 DRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTD 63 D N ++ L Q++A ++P H++ AL+ + G L+ + +R Sbjct: 4 DLSANARKVLLELGQTVAREARASLLQPEHILLALIQHKVGRGYKLIEKLIEDVATVRLI 63 Query: 64 INQALNRLPQVEGTGGDVQPSQDLV---RVLNLCDKLAQKRGD---NFISSELFVLA-AL 116 + Q V GDV QDL RV +L D A + +I +E V+A A Sbjct: 64 LEQ------HVLTNEGDVASPQDLPVSGRVKHLLDIAAMEARSLRCAYIGTEHLVIAFAR 117 Query: 117 ESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKK--------YTIDL 168 E + L L G + ++ +R ++ ++ R L++ Y DL Sbjct: 118 EEQNPLFQSLIREGLS-------LDDLRNASIISSPHSDTTRTRLERKVASVLDEYGTDL 170 Query: 169 TERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEV 228 TERA G L+PVIGR++EI R IQ+L RR KNNPVLIGEPGVGKT+IVEGLA I+ EV Sbjct: 171 TERARAGALNPVIGRNKEITRVIQILCRRGKNNPVLIGEPGVGKTSIVEGLAYAIVREEV 230 Query: 229 PEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGK 288 P L RV++LD+ A++AG KYRG+FEERLK ++ ++ + E VILFIDELHT++GAG Sbjct: 231 PHILLHTRVVSLDLAAVIAGTKYRGQFEERLKRIIKEVEETE-KVILFIDELHTLIGAGG 289 Query: 289 ADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIA 348 G++DA NMLKPALARG++ C+GATTL EYR+Y EKDAAL RRF+ V V EPS E+T Sbjct: 290 TQGSLDAANMLKPALARGQIQCIGATTLAEYRRYFEKDAALTRRFRSVLVREPSFEETCT 349 Query: 349 ILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSK 408 ILR +K YE HH V A+ LS RYI +R PDKAIDL+DE + R+Q + Sbjct: 350 ILRKIKSHYERHHQVIYQSDALEKIVELSRRYIPERFFPDKAIDLMDEVGAMKRVQQRAD 409 Query: 409 PEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKAS 468 + L ++ L E + + D A R L+ ++ R+ L+ EW A +A Sbjct: 410 TQVLRSFSIKVANLTTETERAIALEDWA---RARSLHTDVVQLRRRLHALKVEWSAREA- 465 Query: 469 LSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLR 528 +I AE D+A+ L IP LEG Sbjct: 466 ----LSIFAE---------------DVAQAVSLM-TDIP--------VHSLEG------- 490 Query: 529 NKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSR 588 + L R+T I E++L V GQ EA+ ++ AI R+R Sbjct: 491 ---------DELCRFTNI----------------ERDLCATVRGQREAIATLARAIVRAR 525 Query: 589 AGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVG 648 G++ RPIGSFLFLGPTGVGKT L K LA F+F S +A++RIDMS++ME+++ SRL+G Sbjct: 526 VGISSDTRPIGSFLFLGPTGVGKTLLAKTLAEFLFGSADALIRIDMSDYMERYNTSRLMG 585 Query: 649 APPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVD 708 APPGYVG+E GG LTE VR RP+SVILLDE+EKAHPDVFN+LLQVL++G L D G TV+ Sbjct: 586 APPGYVGFENGGLLTERVRHRPFSVILLDEIEKAHPDVFNVLLQVLEEGELQDNLGHTVN 645 Query: 709 FRNTVVIMTSNLGSDLIQE--------RFGELDYAHMKELVLGVVSHNFRPEFINRIDEV 760 FRNT++IMTSN G+ + E R ++Y ++ L + F PEF+NR+DE Sbjct: 646 FRNTIIIMTSNAGTRGLGENVPGFQTARARNIEYRQLRVQALREIKRIFSPEFLNRVDEC 705 Query: 761 VVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRA 820 VVF PL + + I + +LK+L +RL + + S A E+G+DP GARPL+R Sbjct: 706 VVFAPLERETLQEILECELKKLAERLRGKDIVLRYSAAAKAYCLEHGFDPFLGARPLRRV 765 Query: 821 IQQQIENPLAQQILSGELVPGKVIRLEVNEDRI 853 +QQ+IEN LA +++ G L G + ++ + R+ Sbjct: 766 LQQEIENELALRMIHGTLRAGSCVHIDSDGARL 798 >UniRef50_C6HYE9 ATPase AAA-2 domain protein n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HYE9_9BACT Length = 890 Score = 580 bits (1496), Expect = e-164, Method: Compositional matrix adjust. Identities = 350/859 (40%), Positives = 510/859 (59%), Gaps = 43/859 (5%) Query: 5 RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDI 64 R++ A+ L L + I P H++ +LL+ V +L + GI+ G +R ++ Sbjct: 12 RMSPILTRAVEQGAGLCLSRSHYEITPEHVVISLLDHPDSDVMKILAAEGIDGGSVRREM 71 Query: 65 NQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQ-KRGDNFISSELFVLAALE-----S 118 + AL+ L G GG S L+ VL +A R + S +F+ A + S Sbjct: 72 SNALDDLRS--GNGGRPVFSPLLIEVLQDAHLIASINRNEPHTRSGVFLQAFVNRLSAYS 129 Query: 119 RGTLADILKAAGATTA-----NITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAE 173 G + L+ G + + GG + +G ++ A+ ++ D TE+A Sbjct: 130 SGRPSKSLERIGKERLKDQFDTLASGSAEAIGGGQESQEGPSEEGTAIGRFCEDFTEKAR 189 Query: 174 QGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLK 233 +GK+DPV GRD E+R+ I +L RR KNNP+ +G+PGVGKTA+VE LA RI+ G+VPE L Sbjct: 190 KGKIDPVFGRDAEVRQIIDILSRRRKNNPICVGDPGVGKTAVVESLALRIVEGDVPESLS 249 Query: 234 GRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAM 293 R+L LDMGAL AGA +GEFE RLKGV+N++ VILFIDE HT++GAG A G Sbjct: 250 KVRLLGLDMGALEAGAGVKGEFENRLKGVINEIKASSVPVILFIDEAHTLIGAGGAQGGG 309 Query: 294 DAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGL 353 DA N+LKPALARGEL + ATT EY++Y EKDAAL RRFQ V + EPSVE I ILRGL Sbjct: 310 DAANLLKPALARGELRTIAATTWAEYKKYFEKDAALARRFQPVKLDEPSVETAILILRGL 369 Query: 354 KERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELD 413 K YE HHV I D A+VAAATLS RY+ R+LPDKA+DL+D +A+ IR+ SKPE+++ Sbjct: 370 KAHYEAVHHVTIRDDALVAAATLSDRYLTGRKLPDKAVDLLDTSAARIRISQSSKPEKIE 429 Query: 414 RLDRRIIQLKLEQQALMKE---SDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLS 470 L+RRI L+ E+ L+++ + +RLD + EL E++ S E W+ EK ++ Sbjct: 430 GLERRIQALEREKNGLVRDQTFGQDIPAERLDAIGRELGTLEQELSRQRERWEKEKTAV- 488 Query: 471 GTQTIKAELEQAKIAIEQARRVGD--LARMSELQYGKIPELEKQLEAATQLEGKTMRLLR 528 AEL + E RR G + M EL + EAA + + ++ Sbjct: 489 ------AELLAHR---EDPRREGPDRESWMKEL---------RTKEAAVRKIQEDHPMIH 530 Query: 529 NKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSR 588 +V +A V++ WTGIP+ +++ + + ++R+++ L RV+GQ A+ V IR SR Sbjct: 531 FEVDPETVARVVSNWTGIPLGKLLREQAQTVMRLQETLGERVLGQEPALARVGEIIRNSR 590 Query: 589 AGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVG 648 AG PN+P+G FL +GP+GVGKTE A+A+ +F ++A V ++MSEF EKH SRL+G Sbjct: 591 AGFKAPNQPVGIFLLVGPSGVGKTETALAVADILFGDEKATVTLNMSEFQEKHQASRLIG 650 Query: 649 APPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVD 708 +PPGYVGY EGG LTEAVR+RPYSV+LLDEVEKAHPD+ N+ QV D G L+DG+G+ +D Sbjct: 651 SPPGYVGYGEGGLLTEAVRQRPYSVVLLDEVEKAHPDILNMFYQVFDKGVLSDGEGKEID 710 Query: 709 FRNTVVIMTSNLGSDLIQE---RFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHP 765 F NTV+ +TSNL S+ + E Y + L+ +S +F+P + R+ +V + P Sbjct: 711 FSNTVIFLTSNLASEKLSAYALEHPEASYEDLVTLIRPDLSRHFKPALLARMT-IVPYLP 769 Query: 766 LGEQHIASIAQIQLKRLYKRL-EERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQ 824 L + + I +++ KRL + + G EI D + ++ GAR + +Q + Sbjct: 770 LRGEALGRIVRLKTKRLSRSFVQNNGVEIVFEDSLIDHVALQCETSEAGARNIDYLLQSR 829 Query: 825 IENPLAQQILSGELVPGKV 843 I ++++++ G LV G + Sbjct: 830 ILPEISRELI-GRLVEGTL 847 >UniRef50_UPI0001C3229B ATPase AAA-2 domain protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3229B Length = 761 Score = 580 bits (1495), Expect = e-164, Method: Compositional matrix adjust. Identities = 333/703 (47%), Positives = 454/703 (64%), Gaps = 75/703 (10%) Query: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220 L ++ DLTE A G++D VIGRD+EI +TI+VL RR KNN VLIGE GVGKTAI EGLA Sbjct: 106 LDQFGRDLTEDARVGRIDAVIGRDDEIEQTIEVLARRRKNNAVLIGEAGVGKTAIAEGLA 165 Query: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280 RI EVPE L+ R++++D+G +VAGA++RG+FE+RLK L ++ +G V+LFIDEL Sbjct: 166 LRIARNEVPETLREVRIVSVDLGGMVAGAQFRGQFEQRLKTALEEVVATDGKVVLFIDEL 225 Query: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340 HT+VGAG A+GAMDA N+LKP LARGEL VGATTL EYR+ IEKD AL RRF V V E Sbjct: 226 HTIVGAGGAEGAMDAANLLKPLLARGELRVVGATTLAEYRK-IEKDGALARRFAAVHVEE 284 Query: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400 PSVE T+AILRGL+ YE HH V+I D A+ AAA LS RY+ + LPDKAIDL+D+A S Sbjct: 285 PSVEATVAILRGLRPAYEEHHGVKIADAALDAAARLSDRYVTEYHLPDKAIDLMDQA--S 342 Query: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 460 R+ + + ++ RL R + L+ E+QA + EA + D L + + E+Q + L Sbjct: 343 ARVHLHGERSDVARLQRELHYLQAEKQAAVDA--EAYEDAAD-LRKRIDGVEQQLAALAA 399 Query: 461 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 520 + +S T T + + +A A R G IP Sbjct: 400 DGADAASSTGDTGTASLAVTETDVAAVVAARTG------------IP------------- 434 Query: 521 GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAV 580 + E++A E EKL +E +LH RV+GQ+ AV+ V Sbjct: 435 ---------------VGELVA------------GELEKLQELEADLHARVVGQDGAVETV 467 Query: 581 SNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEK 640 ++ IRR+R GL++ +RP+G+FLFLGPTGVGKTEL KAL+ +F +++++VRIDMSEF E Sbjct: 468 ADTIRRARVGLSEGDRPLGTFLFLGPTGVGKTELVKALSERLFGTEKSLVRIDMSEFREP 527 Query: 641 HSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLT 700 H+V+RL+G+PPGYVGY +GG LTE VRRRPYSV+LLDE+EKAHP+V+N+LLQV+DDGRLT Sbjct: 528 HTVARLIGSPPGYVGYGDGGQLTEPVRRRPYSVVLLDEIEKAHPEVWNVLLQVMDDGRLT 587 Query: 701 DGQGRTVDFRNTVVIMTSNLGSDLIQERF-------GELDYAHMKELVLGVVSHNFRPEF 753 DG+GRTVDF NTV++MTSNLG+ +++ GE + + ++ F PEF Sbjct: 588 DGEGRTVDFANTVLVMTSNLGAPKSKKQALGFATSDGEGERGDVAAQMVAAAKRAFLPEF 647 Query: 754 INRIDEVVVFHPLGEQHIASIAQIQLKRLYKRL-EERGYEIHISDEALKLLSENGYDPVY 812 +NRIDE+VVF L + + I ++ ++R+ +RL ER E+ + + + LS G+DP Y Sbjct: 648 VNRIDELVVFDALSAEQVERIGELIVERVEERLASERDIELEVEPKLIARLSREGFDPEY 707 Query: 813 GARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855 GARPL+R +++ +E L + I+ G L G DR+VA Sbjct: 708 GARPLQRHVRRTLEKELTKAIVEGRLNDG---------DRVVA 741 >UniRef50_UPI0001C37703 ATPase AAA-2 domain protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37703 Length = 792 Score = 574 bits (1480), Expect = e-162, Method: Compositional matrix adjust. Identities = 307/678 (45%), Positives = 441/678 (65%), Gaps = 74/678 (10%) Query: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220 L Y +L+++A G+LD +IGRD+EI R IQ+L RRTKNNP LIGEPGVGKTAI EG+A Sbjct: 153 LGSYCTNLSQKAADGQLDNIIGRDKEIARVIQILSRRTKNNPCLIGEPGVGKTAIAEGIA 212 Query: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280 QRI +G+VP L +++ LD+ ALVAG ++RG+FE R+KG+++++ K+EGN+ILFIDE+ Sbjct: 213 QRINSGDVPFNLADKKLYLLDLTALVAGTQFRGQFESRVKGLVDEV-KREGNIILFIDEV 271 Query: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340 H +VGAG ++G+M+A N+LKPAL+RGE+ +GATT EYR+YIEKD+ALERRFQ V V E Sbjct: 272 HNLVGAGDSEGSMNAANILKPALSRGEVQVIGATTFGEYRKYIEKDSALERRFQPVTVNE 331 Query: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400 P++EDT+++L G+K+ YE +HH+ I+D + A LS RYI DR LPDKAIDL+DEA + Sbjct: 332 PNIEDTVSVLLGIKKYYEEYHHLHISDYLVRVCAVLSERYITDRFLPDKAIDLMDEACAY 391 Query: 401 IRMQIDSKPE--ELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSEL 458 ++ PE E +++ + I L+ ++++ E DE + L E+ K E Sbjct: 392 TCIR---SPEIAEYEKIKKEISVLEGMEKSI-SEQDEIDYQAL----AEVKGKLIHARED 443 Query: 459 EEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQ 518 E + + + S+ T+ GD+A++ EL G Sbjct: 444 EAKLRDKAESVEVTE-------------------GDIAKVVELWTG-------------- 470 Query: 519 LEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVD 578 IP S++ E+E K+ ++E L RV+GQ+EAV+ Sbjct: 471 ---------------------------IPASKIAENEFLKIAKLEGALKSRVLGQDEAVE 503 Query: 579 AVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFM 638 ++ AI+R+R L+ RP SF+F+GPTGVGKTEL KALA MFDS E ++R+DM+E+M Sbjct: 504 VLTKAIKRTRVQLSKRRRP-ASFIFVGPTGVGKTELVKALAEEMFDSPEPLIRLDMTEYM 562 Query: 639 EKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGR 698 EKHSV+R++G+PPGYVGY+E G LTE VRRRPYSVIL DE+EKAHPDV NIL+Q+LD+G+ Sbjct: 563 EKHSVARMIGSPPGYVGYDEAGQLTEKVRRRPYSVILFDEIEKAHPDVMNILMQILDEGK 622 Query: 699 LTDGQGRTVDFRNTVVIMTSNLGS--DLIQERFGELDYAHMKELVLGVVSHNFRPEFINR 756 + D GRTV+F NT++ MTSN GS + F K+ + + RPEFI+R Sbjct: 623 VDDAHGRTVNFENTIICMTSNAGSTDKSVGVGFNRTADEVSKDKAMKGLREFLRPEFISR 682 Query: 757 IDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARP 816 IDE+VVF L +++ A IA + L + + L E+ + + EALKL++E + YGAR Sbjct: 683 IDEIVVFRQLTKENFADIAALMLDEMKEPLAEKNIGLTYTPEALKLIAEKSFGKPYGARD 742 Query: 817 LKRAIQQQIENPLAQQIL 834 ++R I+Q++E+ +A+ I+ Sbjct: 743 IRRVIRQEVEDKVAEIII 760 >UniRef50_B3L4X1 Heat shock protein 101, putative n=8 Tax=Plasmodium RepID=B3L4X1_PLAKH Length = 906 Score = 573 bits (1477), Expect = e-162, Method: Compositional matrix adjust. Identities = 319/859 (37%), Positives = 506/859 (58%), Gaps = 51/859 (5%) Query: 23 GHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQALNRL---PQVEGTGG 79 GH ++P+H++SAL + GS LL +NA L+ ++ AL + P ++ Sbjct: 56 GHSQ--LKPVHILSALAKSDYGS--NLLKENSVNASNLKQYLDTALEQTRAGPPLDNKS- 110 Query: 80 DVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAGATTANITQA 139 + S + VL + LA K + E +L+ L + + +IL T + + Sbjct: 111 KIAYSDQVKEVLAEAEALANKYKSQKVDVE-HLLSGLMNDELVNEILNEVYLTDEAV-KG 168 Query: 140 IEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTK 199 I + + ++ D+ + L+++ +L E+ GKL + GRDEEIR I+ L R K Sbjct: 169 ILKSKLEKTKKDKDGKSGGLYLEQFGSNLNEKVRNGKLQGIYGRDEEIRAVIESLLRYNK 228 Query: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259 N+PVL+G+PG GKT IVEGL RI G+VP+ L+G V++L+ +G YRGEFE R+ Sbjct: 229 NSPVLVGQPGTGKTTIVEGLVYRIEKGDVPKELRGYTVISLNFRKFTSGTSYRGEFETRM 288 Query: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319 K ++ +L ++ +ILF+DE+H ++GAGKA+G DA N+LKP L++GE+ +GATT+ EY Sbjct: 289 KNIIKELKNKKNKIILFVDEIHLLLGAGKAEGGTDAANLLKPVLSKGEIKLIGATTIAEY 348 Query: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379 R++IE +A ERRF+K+ V PSVE+TI ILR LK +YE + + ITD A+VAAA +S R Sbjct: 349 RKFIESCSAFERRFEKILVEPPSVENTIKILRSLKSKYESFYGIHITDKALVAAAKVSDR 408 Query: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439 +I DR LPDKAIDL+++A S +++Q+ KP +D +R I +L E L + D+ SK+ Sbjct: 409 FIKDRYLPDKAIDLLNKACSFLQVQLSGKPRIIDVTEREIERLAYEISTLEMDVDKVSKR 468 Query: 440 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499 + + L +E +K+ EE+ +SG E+ K E +R+ +L ++ Sbjct: 469 KYNNLIKEFENKKDLLRTYYEEY-----VISG--------ERLKRKKEAEKRLNELKELA 515 Query: 500 E--LQYGKIPELEKQ--------------LEAATQLEGKTMRLLR-NKVTDAEIAEVLAR 542 + + K P +E Q E +E KT + + V ++ + R Sbjct: 516 QNYISANKEPPIELQNSLKDAQEKYMEVYKETLAYVEAKTHNAMNVDAVYQEHVSYIYLR 575 Query: 543 WTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFL 602 +G+P+ + + L++ L +IG + + ++S+A+ ++ G+ DP +PIG+FL Sbjct: 576 DSGMPLGSLSFESSKGALKLYNSLSKSIIGNEDIIKSLSDAVVKAATGMKDPEKPIGTFL 635 Query: 603 FLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYL 662 FLGPTGVGKTEL K LA +F S + ++R++MSEF E HSVS++ G+PPGYVG+ + G L Sbjct: 636 FLGPTGVGKTELAKTLAIELFSSKDNLIRVNMSEFTEAHSVSKITGSPPGYVGFSDSGQL 695 Query: 663 TEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGS 722 TEAVR RP+SV+L DE+EKAHPDVF +LLQ+L DG + D R +DF NT++IMTSNLG+ Sbjct: 696 TEAVRERPHSVVLFDELEKAHPDVFKVLLQILGDGYINDNHRRNIDFSNTIIIMTSNLGA 755 Query: 723 DLIQER-FGELDYAHMKEL----------VLGVVSHNFRPEFINRIDEVVVFHPLGEQHI 771 +L +++ F + + + E ++ F+PEF+NRID++ +F PL ++++ Sbjct: 756 ELFKKKLFFDANNSDTPEYKRVFDDLRIQLIKKCKKVFKPEFVNRIDKIGIFEPLSKKNL 815 Query: 772 ASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQ 831 I +++ K+L KRLEE+ + +S++A+ + + YDP GARP I+ I A Sbjct: 816 REIVKLRFKKLEKRLEEKNIHVSVSEKAVDYIIDQSYDPELGARPTLIFIESVIMTKFAI 875 Query: 832 QILSGELVPGKVIRLEVNE 850 L ELV + ++ N+ Sbjct: 876 MYLKKELVDDMDVHVDFNK 894 >UniRef50_Q030Z1 ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones n=5 Tax=Lactococcus lactis RepID=Q030Z1_LACLS Length = 816 Score = 570 bits (1469), Expect = e-161, Method: Compositional matrix adjust. Identities = 348/888 (39%), Positives = 511/888 (57%), Gaps = 118/888 (13%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 LDR+ F+ A DA G IE HL++A+ G +L +++ L Sbjct: 12 LDRI---FEKAAEDAHQYQYGT----IESAHLLAAMATTSGSIAYSILAGMNVDSSDLLI 64 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESR-GT 121 D+ + L+ +V+ + P + V+ + LA + +E + A L+ G Sbjct: 65 DL-EDLSSHVKVKRSELRFSPRAE--EVVTVASFLAVHNNAEAVGTEHLLYALLQVEDGF 121 Query: 122 LADILKAAGATTANITQAIEQMRGGESVNDQGA---------------EDQRQALKKYTI 166 +LK ++ + IE+ G + ++ A L + Sbjct: 122 GIQLLKLQKINIVSLRKEIEKRTGLKVPENKKAVTPMSKRKMAKGVAENSSTPTLDSVSS 181 Query: 167 DLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIING 226 DLTE A GKLDP+IGR+ E+ R I +L RRTKNNPVL+GEPGVGK+AI+EGLAQRI+NG Sbjct: 182 DLTEAARSGKLDPMIGREAEVDRLIHILSRRTKNNPVLVGEPGVGKSAIIEGLAQRIVNG 241 Query: 227 EVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGA 286 +VP GL R++AL+M +VAG K+RGEFE+RL ++ +++ + +VI+FIDELHT++GA Sbjct: 242 QVPIGLMNSRIMALNMATVVAGTKFRGEFEDRLTAIVEEVS-ADPDVIIFIDELHTIIGA 300 Query: 287 GKA-DGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVED 345 G D DA N+LKPALARG+ VGATT E +QK + ++E Sbjct: 301 GGGMDSVNDAANILKPALARGDFQMVGATTYHE--------------YQKYIEKDEALER 346 Query: 346 TIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQI 405 +A + + +P+ PD+AI ++ Sbjct: 347 RLA-------------RINVDEPS-----------------PDEAIAILQG--------- 367 Query: 406 DSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLD-----MLNEELSDKERQYSELEE 460 ++ K E +K +D+A K + M + +L DK L+E Sbjct: 368 --------------LREKFEDYHQVKFTDQAIKSAVTLSVRYMTSRKLPDKAIDL--LDE 411 Query: 461 EWKAEKASLSGTQTIKAELEQ--AKIAIEQARRVGDL-ARMSELQYGKIPELEKQLEAAT 517 A K S+ +T + ELE+ K E A V L + S ++ + ++ ++ + Sbjct: 412 AAAAVKISVKNQETKRLELEKDLVKAQEELAEAVIKLDVKASRIKEKAVEKISDKIYKFS 471 Query: 518 QLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAV 577 E K R +VTD + V + TG+P+++M +SE ++L+ +E+ELH RV+GQ EA+ Sbjct: 472 IKEEK-----RQEVTDQAVIAVASTLTGVPITQMTKSESDRLINLEKELHKRVVGQEEAI 526 Query: 578 DAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEF 637 AVS AIRR+R+G+AD RP+GSF+FLGPTGVGKTEL KALA+ +F S++ M+R+DMSEF Sbjct: 527 SAVSRAIRRARSGVADSRRPMGSFMFLGPTGVGKTELAKALADSVFGSEDNMIRVDMSEF 586 Query: 638 MEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDG 697 MEKHS SRL+GAPPGYVGY+EGG LTE VR +PYSV+LLDEVEKAHPDVFNI+LQ+LDDG Sbjct: 587 MEKHSTSRLIGAPPGYVGYDEGGQLTERVRNKPYSVVLLDEVEKAHPDVFNIMLQILDDG 646 Query: 698 RLTDGQGRTVDFRNTVVIMTSNLGSDLIQER----FG----ELDYAHMKELVLGVVSHNF 749 +TD +GR VDFRNT++IMTSNLG+ +++ FG DY+ M+ +L + ++ Sbjct: 647 FVTDTKGRKVDFRNTIIIMTSNLGATALRDDKTVGFGAKNITADYSAMQSRILEELKRHY 706 Query: 750 RPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYD 809 RPEF+NRIDE +VFH L Q I I +I K L KRL E+ + ++ A+KL++E G+D Sbjct: 707 RPEFLNRIDENIVFHSLESQEIEQIVKIMSKSLIKRLAEQDIHVKLTPSAIKLIAEVGFD 766 Query: 810 PVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857 P YGARPL++A+Q+++E+ L++Q+LSGE+ G I + + +I Q Sbjct: 767 PEYGARPLRKALQKEVEDLLSEQLLSGEIKAGNHISIGASNKKIKIAQ 814 >UniRef50_A8JF08 ClpB chaperone, Hsp100 family (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8JF08_CHLRE Length = 692 Score = 567 bits (1462), Expect = e-160, Method: Compositional matrix adjust. Identities = 318/712 (44%), Positives = 447/712 (62%), Gaps = 56/712 (7%) Query: 154 AEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKT 213 +E AL +Y DLT A +LDP+IGR +E+R+ VL RRTKNNPV++GE GVGKT Sbjct: 3 SEPTPTALSRYGRDLTALARARQLDPLIGRTDELRKLFNVLCRRTKNNPVVLGESGVGKT 62 Query: 214 AIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNV 273 A+VEGLAQRI G+ P LKG ++ALD+G L+AGA + GEFE+R+ VL +L + Sbjct: 63 ALVEGLAQRIAAGDCPPALKGAAIIALDLGMLMAGATFPGEFEQRMSAVLKEL-----SC 117 Query: 274 ILFIDELHTMVG--AGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALER 331 ILFID++H + G A + G DA +LKP LARGEL C+GATT D++R++IEKD ALER Sbjct: 118 ILFIDDIHNVTGPNAQQGGGVNDASMLLKPLLARGELRCIGATTPDKFRRFIEKDPALER 177 Query: 332 RFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAI 391 RFQ++ +A+P+ + ++ILRGL RYE H ++ITD A+VAA LSHRY ADR LPDKAI Sbjct: 178 RFQQLHIAQPTPPEAMSILRGLGARYEKHPALRITDAALVAAVELSHRYTADRFLPDKAI 237 Query: 392 DLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKES--DEASKKRLDMLNEELS 449 DL+DEAA+ +++ +D +P LDR+ RRI QL+ E++ L + + D RL L EL Sbjct: 238 DLVDEAAARVKLDLDQRPAVLDRIIRRIGQLEAERKLLRRSASVDRRDALRLTELEAELG 297 Query: 450 DKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPEL 509 RQ ++ T +++Q+++ E+ VG + G +P+ Sbjct: 298 ALRRQRDDM---------------TAAVDVQQSEVRREEC--VGG-------RGGVVPDY 333 Query: 510 EKQLEAATQLEGKTMRLL-------RNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRM 562 E ++ E L R + E S +E + Sbjct: 334 EPNSTQNSEEESAAYALTTRGNGGKREGLCVLEALHEELEAEEAGRSEAALAEGADRPKT 393 Query: 563 EQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFM 622 ++E R+IGQ EAV AV++AI RSRAGL DPN PI SFLFLGPTGVGKTEL KALA + Sbjct: 394 DKERIARIIGQEEAVSAVADAIHRSRAGLKDPNGPIASFLFLGPTGVGKTELAKALAAQL 453 Query: 623 FDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEV--- 679 F++++AMVR+DMSE+MEKH+VS+L+GAPPGYVG++EGG LTEAVRRRPY+V+L DE+ Sbjct: 454 FNAEDAMVRLDMSEYMEKHAVSKLIGAPPGYVGFDEGGQLTEAVRRRPYTVVLFDELIIN 513 Query: 680 EKAH--PDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLI--------QERF 729 +H P + + QGRTV F++T++IMTSNLGS I + + Sbjct: 514 PPSHIRPSPYALNPSPTHPPTSPSHQGRTVSFKHTIIIMTSNLGSSEIYKATAGRARTQL 573 Query: 730 GELDYA---HMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRL 786 A ++++LV+ V +F PEF+NR+DE ++F PL I S+ ++L+ L RL Sbjct: 574 AATPLAADSNIRDLVMDQVRRHFPPEFLNRVDEFIIFEPLTAVQIRSVVALRLRGLVSRL 633 Query: 787 EERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGEL 838 E+ + ++D A+ L+ G+DP++GARP+KRAIQ+++E PLAQ +L G+ Sbjct: 634 AEKKVRLVLADSAMDHLAAKGFDPIFGARPVKRAIQRELETPLAQALLRGDF 685 >UniRef50_Q9S5Z2 ATP-dependent Clp protease ATP-binding subunit clpE n=161 Tax=Bacilli RepID=CLPE_LACLM Length = 748 Score = 565 bits (1457), Expect = e-159, Method: Compositional matrix adjust. Identities = 320/690 (46%), Positives = 449/690 (65%), Gaps = 75/690 (10%) Query: 144 RGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPV 203 RG + A+ + L+++ I++TE A +G++DPVIGRDEEI+R I++L RRTKNNPV Sbjct: 90 RGPRGPQNPRAKQPKGMLEEFGINITESARRGEIDPVIGRDEEIKRVIEILNRRTKNNPV 149 Query: 204 LIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVL 263 LIGEPGVGKTA+VEGLAQ+I++G+VP+ L+ + V+ LD+ +LV G RG+FEER++ ++ Sbjct: 150 LIGEPGVGKTAVVEGLAQKIVDGDVPQKLQNKEVIRLDVVSLVQGTGIRGQFEERMQKLM 209 Query: 264 NDLAKQEGNVILFIDELHTMVGAGKA-DGAMDAGNMLKPALARGELHCVGATTLDEYRQY 322 +++ K+ +VI+FIDE+H +VGAG A DG MDAGN+LKPALARGEL VGATTL+EYR Sbjct: 210 DEIRKR-NDVIMFIDEIHEIVGAGSAGDGNMDAGNILKPALARGELQLVGATTLNEYR-I 267 Query: 323 IEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIA 382 IEKDAALERR Q V V EPSV++TI ILRG++ RYE +HHV+ TD AI AAA +++ Sbjct: 268 IEKDAALERRMQPVKVDEPSVDETITILRGIQARYEDYHHVKYTDEAIEAAA-----HLS 322 Query: 383 DRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLD 442 +R + D+ L D+A +D LD + SKK L Sbjct: 323 NRYIQDRF--LPDKA--------------IDLLD-----------------ESGSKKNLT 349 Query: 443 MLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQ 502 + + D R+ ++ E + + KAE E+A D Q Sbjct: 350 LKFVDPEDINRRIADAESKK---------NEATKAE------DFEKAAHFRD-------Q 387 Query: 503 YGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRM 562 K+ EL+KQ ++ + M + +T+ +I +++ + T IPV + E E+ +L+ + Sbjct: 388 ISKLRELQKQ-----EVTDEDMPV----ITEKDIEQIVEQKTQIPVGDLKEKEQTQLINL 438 Query: 563 EQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFM 622 +L VIGQ+EAVD +S AIRRSR GL PNRPIGSFLF+GPTGVGKTEL K LA + Sbjct: 439 ADDLKAHVIGQDEAVDKISKAIRRSRVGLGKPNRPIGSFLFVGPTGVGKTELAKQLAKEL 498 Query: 623 FDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKA 682 F S E+M+R DMSE+MEKHSV++L+GAPPGYVGYEE G LTE VRR PYS+ILLDE+EKA Sbjct: 499 FGSSESMIRFDMSEYMEKHSVAKLIGAPPGYVGYEEAGQLTERVRRNPYSLILLDEIEKA 558 Query: 683 HPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQER--FGELDYAHMKEL 740 HPDV ++ LQ+L+DGRLTD QGRTV F+++++IMTSN G+ ++ FG K Sbjct: 559 HPDVMHMFLQILEDGRLTDAQGRTVSFKDSLIIMTSNAGTGKVEASVGFGAAREGRTKS- 617 Query: 741 VLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEAL 800 VLG + F PEF+NR D ++ F L ++++ I + L + +++ + ++ A Sbjct: 618 VLGQLGDFFSPEFMNRFDGIIEFSALSKENLLKIVDLMLDEVNEQIGRNDIHLSVTQAAK 677 Query: 801 KLLSENGYDPVYGARPLKRAIQQQIENPLA 830 + L + GY+P GARPL+R IQ+ IE+ +A Sbjct: 678 EKLVDLGYNPAMGARPLRRIIQENIEDSIA 707 >UniRef50_B8NZA1 Predicted protein (Fragment) n=1 Tax=Postia placenta Mad-698-R RepID=B8NZA1_POSPM Length = 682 Score = 565 bits (1456), Expect = e-159, Method: Compositional matrix adjust. Identities = 319/696 (45%), Positives = 443/696 (63%), Gaps = 36/696 (5%) Query: 160 ALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGL 219 A+ +Y D+T A +GKL+ IGRDEEIRR IQ+L RRTKN+ VLIGEPGVGKTA+ EGL Sbjct: 1 AVLRYATDMTALAREGKLNDTIGRDEEIRRVIQILCRRTKNSAVLIGEPGVGKTAVAEGL 60 Query: 220 AQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFE------ERLKGVLNDLAKQEGN- 272 A RI + +VPE LKG + +LD+GAL AGA +GE+E L+ L L +Q N Sbjct: 61 AHRINSRDVPEHLKGT-IYSLDLGALFAGAG-KGEYEAASLFPRSLR--LYWLTQQNANP 116 Query: 273 VILFIDELHTMV---GAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAAL 329 VILFIDELH + + MDA N+LKPALARG+ C+GATTL EYR++IEKD AL Sbjct: 117 VILFIDELHLITVGKSSSGQSSGMDAANLLKPALARGQFRCIGATTLAEYREHIEKDGAL 176 Query: 330 ERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDK 389 ERRF V V EP++E+ ILRG +ERYE HH V I D AIV A L+HRY+ R+LPD Sbjct: 177 ERRFATVLVNEPTIEEATTILRGTRERYESHHRVWIMDQAIVTAVKLAHRYLTARRLPDS 236 Query: 390 AIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELS 449 A DL+DEA +S R+ D KPE +D +++ ++Q++ +A+ +++ A + L+ S Sbjct: 237 AFDLMDEACASARVSQDMKPEAIDTVEQELLQIEGRIKAIERDNHPADDRALEEAKSVRS 296 Query: 450 DKERQYSELEE------EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQY 503 E + LEE EW + ++L G IKA+ + I + +++E + Sbjct: 297 SLETRKKRLEEQQQKVREWWGDISALRGL--IKAKKDDLDI----------VKKLTETE- 343 Query: 504 GKIPELEKQLEAATQLEGKTMRLLRNK---VTDAEIAEVLARWTGIPVSRMMESEREKLL 560 + P++ ++A E + + R+ +T IAEV+ R T IPV R++ S++ +LL Sbjct: 344 NRGPKVADNMKALNAYEHRRYIVSRSSPDIITPESIAEVVERATKIPVQRLLASDKTRLL 403 Query: 561 RMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALAN 620 +E L +V+GQ EAV +V+NAI+ SR GL + NRPI S LF GP+G GKT L KALA Sbjct: 404 GLEDALAQQVVGQPEAVKSVTNAIQLSRTGLNNTNRPIASLLFTGPSGTGKTLLSKALAQ 463 Query: 621 FMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVE 680 +F +MVRID SE+ + HS+SRL+G+PPGYVGY++GG LTE VRR PY ++LLDE+E Sbjct: 464 ELFGQTTSMVRIDGSEYSQSHSISRLIGSPPGYVGYDQGGQLTEYVRRTPYCIVLLDEIE 523 Query: 681 KAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKEL 740 K + + LQVLD+GRLTDG GR VDFRN V+IMTSN+G+DL+ G + A ++ Sbjct: 524 KTCLEFLTLFLQVLDEGRLTDGHGRLVDFRNCVIIMTSNVGADLLSAENGPIQEAVRLKV 583 Query: 741 VLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEAL 800 + F EF+NRID+VV+F + + + SI + L+ L +R + + I +A Sbjct: 584 MDRFKDVRFPVEFLNRIDDVVMFRTMSQAVMKSILKKNLQDLKQREGMKRLHLDIDAQAE 643 Query: 801 KLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSG 836 L G P YGARPL R IQ+++ NPL+Q++L G Sbjct: 644 TWLISVGISPQYGARPLARVIQRELLNPLSQRLLEG 679 >UniRef50_Q9KAV7 ATP-dependent proteinase n=3 Tax=Bacillus RepID=Q9KAV7_BACHD Length = 711 Score = 559 bits (1441), Expect = e-157, Method: Compositional matrix adjust. Identities = 311/684 (45%), Positives = 439/684 (64%), Gaps = 81/684 (11%) Query: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220 L ++ ++T A+ G++DPVIGRD+E+ R IQ+L RRTKNNPVLIGE GVGKTAIVEG A Sbjct: 87 LDQHGRNVTAEAKAGQIDPVIGRDQEVERLIQILCRRTKNNPVLIGEAGVGKTAIVEGFA 146 Query: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280 +RI G VP +K + V L++ +LVAG YRG+FEE+++ ++ +L ++ +VILFIDE+ Sbjct: 147 RRIAEGNVPAKMKNKEVYELELSSLVAGTSYRGQFEEKMEQLVRELEARD-DVILFIDEI 205 Query: 281 HTMVGAG-KADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVA 339 H +VGAG ++G+MDAGN+LKPALARG+L +GATTL+EYR+ IEKD ALERRFQ + V Sbjct: 206 HMVVGAGATSEGSMDAGNILKPALARGQLQIIGATTLNEYRK-IEKDPALERRFQPITVK 264 Query: 340 EPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAAS 399 EP++E + IL+G++ YE +HHV D + A LS RYI DR LPDKAIDL+DE S Sbjct: 265 EPTLEAAVEILKGVRPIYEAYHHVSYPDDVLEACVRLSDRYIQDRFLPDKAIDLMDEIGS 324 Query: 400 SIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSD--KERQYSE 457 + + + S P LD L E L++ KE+Q + Sbjct: 325 A--LTLTSGP-----------------------------TTLDELKERLAEITKEKQQAT 353 Query: 458 LEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAAT 517 +E++ E+A ++ D + L KQ+ Sbjct: 354 AQEDY------------------------ERAAKLRDEENL----------LHKQMNEN- 378 Query: 518 QLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAV 577 R + +VT A+I ++ + TGIPV ++ ++E+ K+ + L +VIGQ EAV Sbjct: 379 -------RAEKTEVTVADIQGLIEKRTGIPVRKLQKAEQTKMKDLHNRLARQVIGQAEAV 431 Query: 578 DAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEF 637 + V+ AI+RSRAGL NRPI SF+F+GPTGVGKTEL K LA +F S EAM+R+DMSEF Sbjct: 432 EKVAKAIKRSRAGLKPKNRPI-SFMFVGPTGVGKTELTKTLAQELFGSKEAMIRLDMSEF 490 Query: 638 MEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDG 697 MEKHSVS+L+G+PPGYVG++EGG LTE VRR+PYS+ILLDE+EKAHPDV ++ LQ+L+DG Sbjct: 491 MEKHSVSKLIGSPPGYVGHDEGGQLTEQVRRKPYSIILLDEIEKAHPDVQHMFLQILEDG 550 Query: 698 RLTDGQGRTVDFRNTVVIMTSNLGSDL--IQERFGELDYAHMKELVLGVVSHNFRPEFIN 755 RLTD QGR V F++TV+IMTSN G + I F + K +L ++ F+PEF+N Sbjct: 551 RLTDSQGRAVSFKDTVIIMTSNAGVGVKKITVGFEKNVETQNKAGILEQINQYFKPEFLN 610 Query: 756 RIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGAR 815 R+D ++ F+ L EQ + I + L+ L RL E+ + +S++A L + G D +GAR Sbjct: 611 RLDAIIEFNHLTEQDLMRIVDLMLQDLGDRLAEQDISLTVSEKAKAQLVKIGSDRAFGAR 670 Query: 816 PLKRAIQQQIENPLAQQILSGELV 839 PL+RAIQ +E+ + ++++ E + Sbjct: 671 PLRRAIQDHVEDSITEKLIDEESI 694 >UniRef50_C2MCW4 ATP-dependent Clp protease, ATP-binding subunit ClpC n=2 Tax=Bacteria RepID=C2MCW4_9PORP Length = 1011 Score = 556 bits (1432), Expect = e-156, Method: Compositional matrix adjust. Identities = 306/707 (43%), Positives = 435/707 (61%), Gaps = 77/707 (10%) Query: 160 ALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGL 219 AL + +L + A+ GKLDP+IGR +E+ R +L RR KNNPVLIGE GVGKTA+ EGL Sbjct: 332 ALDAFATNLNQLAKDGKLDPMIGRAKELERITHILCRRQKNNPVLIGEAGVGKTAVAEGL 391 Query: 220 AQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDE 279 AQ + EV L+G+ + ++D+ ++AG +YRG+FEER K +L + A+ GN IL DE Sbjct: 392 AQLLARDEVSYKLRGKVLYSVDLAQMLAGTRYRGDFEERFKALLKE-AEMLGNTILLFDE 450 Query: 280 LHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVA 339 +HT++GAG +G+MDA NMLKPALARG + +GATTLDEYR+ IEK+ AL RRFQKV + Sbjct: 451 IHTLMGAGSTEGSMDASNMLKPALARGTIQVIGATTLDEYRRTIEKNGALARRFQKVMIE 510 Query: 340 EPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAAS 399 + E+T+ ILR L+ RYE HHV +D A++A L++RYI DR PDKAID++DE + Sbjct: 511 PNTPEETLEILRQLRGRYEEFHHVHYSDEALIAMVRLTNRYIYDRYFPDKAIDVLDEVGA 570 Query: 400 SIRMQIDSKPEELDR---LDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYS 456 S M + K E D+ L +++ + + ++ES+ + L + EEL KE Sbjct: 571 S--MHLKGKLGESDKVASLRQQLRTYRASRDKAVRESNYDTAMTLK-VQEELVQKE---- 623 Query: 457 ELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAA 516 + ELE+A EA Sbjct: 624 ------------------VDEELEKAHAE----------------------------EAG 637 Query: 517 TQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEA 576 T L V + +A+ ++ +G+P+S + + E KL +M Q L VIGQ++A Sbjct: 638 TYL----------PVDEEAVAKTVSMMSGVPISNISQEEHAKLRQMRQTLKDIVIGQDDA 687 Query: 577 VDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSE 636 ++ V AI+R+R GL RPIGSFLFLGPTGVGKT L K LA +FD ++A++RIDMSE Sbjct: 688 INKVVKAIQRNRLGLGSDKRPIGSFLFLGPTGVGKTYLAKKLAELLFDDEDALIRIDMSE 747 Query: 637 FMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDD 696 +ME +VSRLVGA PGYVGY+EGG LTE VRR+PYSV+L DE+EKAHPDV+NILLQ+LDD Sbjct: 748 YMESFNVSRLVGAAPGYVGYDEGGQLTEQVRRKPYSVVLFDELEKAHPDVYNILLQILDD 807 Query: 697 GRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFG---------ELDYAHMKELVLGVVSH 747 G +T G V F+NTV+I+TSN+G+ +++ FG +L + L+ + Sbjct: 808 GFITAADGTHVSFKNTVIILTSNIGTRQLKD-FGAGVGFRQEVQLSQTEQEALLSKQLKK 866 Query: 748 NFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENG 807 +F PEF+NR+D+ + F L ++ I I ++L+ + R+ E+GY + ++ A L++ G Sbjct: 867 HFSPEFLNRLDDTIYFASLEKEDIRKIVDVELRPIMARITEQGYNLVVTPSAKDKLADVG 926 Query: 808 YDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIV 854 +D YGARPL+RA++ IE+ L IL GE G +RL V+E ++ Sbjct: 927 FDLEYGARPLRRALRHWIEDKLTDLILDGEANVGDTVRLRVSEGELL 973 >UniRef50_A5WFU1 ATP-dependent Clp protease ATP-binding subunit ClpA n=5 Tax=Proteobacteria RepID=A5WFU1_PSYWF Length = 854 Score = 554 bits (1428), Expect = e-156, Method: Compositional matrix adjust. Identities = 320/821 (38%), Positives = 489/821 (59%), Gaps = 66/821 (8%) Query: 50 LTSAGINAGQLRTDINQALNR-LPQVEGTGGDV-QPSQDLVRVLNLCDKLAQKRGDNFI- 106 L S G + LR+D+ +++ P+++ Q +Q R+L Q G + Sbjct: 44 LKSCGADISSLRSDLEAYIDKHTPKLDADLEQTPQATQGFDRILQRAIFHVQSIGSGRLV 103 Query: 107 -SSELFVLAALESRGTLADILKAAGATTANITQAI------EQMRGGESVND----QGAE 155 S++ V E +LK G + +TQ + ++ R G S N+ + A Sbjct: 104 QGSDILVSMFSEHDTYAVYLLKKQGVSRLELTQYLSHGNEGDETREGPSDNEGADPKAAR 163 Query: 156 DQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAI 215 ++ L ++ ++L +RA +GK DP+IGR EI RT QVL RR KNNP+L+G+PGVGKT+I Sbjct: 164 AKKDPLTEFAVNLNKRAAEGKTDPLIGRSSEIERTAQVLCRRRKNNPLLVGDPGVGKTSI 223 Query: 216 VEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVIL 275 EGLA IIN + P+ L+G + +LD+G+L+AG KYRG+FE+R+K +L++L K++ N IL Sbjct: 224 AEGLAWLIINNKAPKPLQGCVIYSLDIGSLIAGTKYRGDFEKRMKALLDEL-KKKPNAIL 282 Query: 276 FIDELHTMVGAGKA-DGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334 FIDE+H ++GAG + MD N++KPALA GEL C+G+TT EYRQ EKD AL RRFQ Sbjct: 283 FIDEVHMIIGAGSSMSSNMDVSNLIKPALANGELRCIGSTTFTEYRQVFEKDHALSRRFQ 342 Query: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394 K+ V EPSV+D+I ILRGLK RYE H+V+ TD A+V+A LS ++I +R LPDKAID+I Sbjct: 343 KIDVNEPSVDDSIEILRGLKSRYEEFHNVKYTDAALVSAVQLSAKHIHERFLPDKAIDVI 402 Query: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQ 454 DEA + R+ + +++ E+ L+ E + +D+ ++ L +K Sbjct: 403 DEAGAYKRLGVTPDAAQVE-----------EENQLIDELNSTDVNAVDLNDDVLGNK--- 448 Query: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLE 514 ++ + + A+++ L + + + ++E D A L+ + + Sbjct: 449 -TDYDAQIDADESGLDAEANDDNDDDALE-SVESDFEDTDEA------------LDDETQ 494 Query: 515 AATQLEGKTMRLLRNKVTDAE-IAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQ 573 AA V D E I ++++ IP + ++ L +E++L+ V GQ Sbjct: 495 AAP------------TVIDVEDIEAIISKLARIPPKSVSNDDKSLLQHLERDLNRLVFGQ 542 Query: 574 NEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRID 633 +EA+ +S+AI+ SRAGL ++PIGSF+F GPTGVGKTE+ K LAN M ++R D Sbjct: 543 DEAIKTLSDAIKLSRAGLKSADKPIGSFMFAGPTGVGKTEVSKQLANLM---GIELIRFD 599 Query: 634 MSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQV 693 MSE+ME H+ SRL+GAPPGYVG+++GG LTE + + P+ V+LLDE+EKAHPDVFN+LLQV Sbjct: 600 MSEYMEAHTASRLIGAPPGYVGFDQGGLLTEKINQHPHCVLLLDEIEKAHPDVFNLLLQV 659 Query: 694 LDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQER---FGELDYAHMKELVLGVVSHNFR 750 +D G LTD GR F+ ++IMT+N+G++ I F + D++ + V F Sbjct: 660 MDHGSLTDNNGRVASFKQVILIMTTNVGAENISRSSMGFTKQDHSKDNTEAMNRV---FT 716 Query: 751 PEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDP 810 PEF NR+D ++ F+PL + S+ L L +L+++ + I DE + L+E GYD Sbjct: 717 PEFRNRLDAIIQFNPLDPSIVVSVVDKFLVELQAQLDDKQVMLEIDDEVREYLAEKGYDR 776 Query: 811 VYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNED 851 + GARP++R IQ +I+ PLA +L G+L G + + ++ED Sbjct: 777 LMGARPMQRLIQNEIKKPLANMVLFGDLAEGGAVHVTLSED 817 >UniRef50_C5WHX6 ATP-dependent endopeptidase clp ATP-binding subunit n=67 Tax=Bacilli RepID=C5WHX6_STRDG Length = 763 Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust. Identities = 315/679 (46%), Positives = 426/679 (62%), Gaps = 79/679 (11%) Query: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220 L+++ I++T+ A G +DPVIGRD+EI R I++L RRTKNNPVLIGEPGVGKTA+VEGLA Sbjct: 120 LEEFGINVTDIARHGDIDPVIGRDDEITRVIEILNRRTKNNPVLIGEPGVGKTAVVEGLA 179 Query: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280 Q+I++G VP L+G++V+ LD+ +LV G RG+FEER++ ++ ++ +Q +VILFIDE+ Sbjct: 180 QKIVDGTVPHKLQGKQVIRLDVVSLVQGTGIRGQFEERMQKLMEEI-RQRKDVILFIDEI 238 Query: 281 HTMVGAGKA-DGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVA 339 H +VGAG A DG MDAGN+LKPALARGEL VGATTL+EYR IEKDAALERR Q V V Sbjct: 239 HEIVGAGSAGDGNMDAGNILKPALARGELQLVGATTLNEYR-IIEKDAALERRMQPVKVD 297 Query: 340 EPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAAS 399 EPSVE+TI IL+G++ +YE +HHV+ + AI EAA+ Sbjct: 298 EPSVEETITILKGIQPKYEDYHHVKYSPAAI-------------------------EAAA 332 Query: 400 SIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELE 459 L R IQ + + DEA K LN + KE +E Sbjct: 333 --------------HLSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNF-VDPKEIDKRLIE 377 Query: 460 EEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQL 519 E +L T + E+A +Q +A+ E+Q K+ E + + Sbjct: 378 AE------NLKAQATRDEDYERAAYFRDQ------IAKYKEMQAQKVDEQDIPI------ 419 Query: 520 EGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDA 579 +T+ I ++ + T IPV + E E+ +L+ + +L VIGQ++AVD Sbjct: 420 -----------ITEKTIEAIIEQKTNIPVGDLKEKEQSQLVNLANDLKAHVIGQDDAVDK 468 Query: 580 VSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFME 639 ++ AIRR+R GL PNRPIGSFLF+GPTGVGKTEL K LA +F S + M+R DMSE+ME Sbjct: 469 IAKAIRRNRVGLGTPNRPIGSFLFVGPTGVGKTELSKQLAIELFGSADNMIRFDMSEYME 528 Query: 640 KHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRL 699 KH+V++LVGAPPGYVGYEE G LTE VRR PYS+ILLDEVEKAHPDV ++ LQVLDDGRL Sbjct: 529 KHAVAKLVGAPPGYVGYEEAGQLTEQVRRNPYSLILLDEVEKAHPDVMHMFLQVLDDGRL 588 Query: 700 TDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKE----LVLGVVSHNFRPEFIN 755 TDGQGRTV F++T++IMTSN G+ + G + +E VLG +S+ F PEF+N Sbjct: 589 TDGQGRTVSFKDTIIIMTSNAGTGKSEASVG---FGAAREGRTSSVLGELSNFFSPEFMN 645 Query: 756 RIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGAR 815 R D ++ F L + ++ I + L+ + KRL G + ++ + + L + GYDP GAR Sbjct: 646 RFDGIIEFKALSKDNLLHIVDLMLEDVNKRLSYNGIHLDVTQKVKEKLVDLGYDPKMGAR 705 Query: 816 PLKRAIQQQIENPLAQQIL 834 PL+R IQ IE+ + L Sbjct: 706 PLRRTIQDYIEDAITDYYL 724 >UniRef50_A6FZR3 ATP-dependent chaperone protein ClpB n=3 Tax=Proteobacteria RepID=A6FZR3_9DELT Length = 921 Score = 544 bits (1401), Expect = e-153, Method: Compositional matrix adjust. Identities = 316/732 (43%), Positives = 443/732 (60%), Gaps = 46/732 (6%) Query: 150 NDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPG 209 + GA AL ++T+ LT+ A G++DP+ GR EIR+ + +L RR KNNP+++GEPG Sbjct: 177 GEAGAPSADSALGQFTVSLTQEARDGRIDPIFGRHREIRQIVDILARRRKNNPIIVGEPG 236 Query: 210 VGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQ 269 VGKTA+VEGLA +I++G+VP+ LK ++ALDMG L AGA +GEFE+RLK V++++ Sbjct: 237 VGKTALVEGLALQIVSGDVPDLLKNVELIALDMGLLQAGASVKGEFEKRLKAVISEVKAS 296 Query: 270 EGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAAL 329 +ILFIDE HT++GAG G DA N+LKPALARGEL V ATT EY++Y EKD AL Sbjct: 297 PTPIILFIDEAHTLIGAGANKGGSDASNLLKPALARGELRTVAATTWSEYKKYFEKDPAL 356 Query: 330 ERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDK 389 ERRFQ V EPSVED + +LRGL +YE H V I D A+VAAA LS RYI+ RQLPDK Sbjct: 357 ERRFQPVKCDEPSVEDAVVMLRGLAGKYEEAHGVTIRDEAVVAAAELSGRYISGRQLPDK 416 Query: 390 AIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELS 449 A+DL+D AA+ ++++ +KP+ ++ L+ + L ++ AL ++ E + D E L Sbjct: 417 AVDLLDTAAARVKIEQGAKPQRIEELELELASLDRKRAALDRDIAEHIEVDQDAYAELLG 476 Query: 450 DKE---RQYSELEEEWKAEKASLSGTQT---IKAELEQAKIAIEQARRVGDLARMSELQY 503 + E ++ + W AE+ ++ + E E A+IA +A G+ E Q Sbjct: 477 EIESLRESVAKGTQRWVAERDAVKAYNAACEVLREAEAAEIAKLEAPAEGE----GEAQA 532 Query: 504 GKIPEL-----EKQLEAATQLEGKTMR----------------------LLRNKVTDAEI 536 P L E + E + K++ L+ ++ + Sbjct: 533 PAEPPLVDAPAEGEGEGEARAPAKSIEELRAEVEAARAAIDAIRGEEDPLVHHECDADVV 592 Query: 537 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNR 596 A+V+A WTGIPV +M +L +E L RV GQ AV VS +R + AG+ DPN Sbjct: 593 AKVVANWTGIPVGKMKADTIGSVLALEDVLGSRVKGQEPAVRVVSETVRMAYAGVRDPNT 652 Query: 597 PIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGY 656 PIG LF+G +GVGKTE+ +LA+ ++ D M I+MSEF EKH+VSRL+G+PPGYVGY Sbjct: 653 PIGVLLFVGTSGVGKTEMALSLADQLYGGDRFMTTINMSEFQEKHTVSRLIGSPPGYVGY 712 Query: 657 EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 716 EGG LTEAVR+RPYSV+LLDE EKA PDV N+ QV D G L DG+GRTVDFRNT++I+ Sbjct: 713 GEGGMLTEAVRQRPYSVVLLDECEKADPDVMNLFYQVFDKGVLNDGEGRTVDFRNTIIIL 772 Query: 717 TSNLGSDLIQERFGELDYAHMKELVLGV---VSHNFRPEFINRIDEVVVFHPLGEQHIAS 773 TSNL SD I + + +E+V + VS +F+P + R+ +V F P+G + + Sbjct: 773 TSNLASDTIMRLYQGDEAPATEEVVEAIRPTVSAHFKPALLARMT-MVPFRPIGPEIMRE 831 Query: 774 IAQIQLKRLYKRLEE-RGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQ 832 IA ++L++L +RL E E SDE L L D GAR + ++ + LA+ Sbjct: 832 IAILKLRKLERRLRETHEIETTFSDELLDELVRRCTDADTGARNVDHTLRASLMPALART 891 Query: 833 IL----SGELVP 840 +L GE+ P Sbjct: 892 LLEYMADGEIPP 903 >UniRef50_A6EIG8 Putative ATP-dependent protease n=1 Tax=Pedobacter sp. BAL39 RepID=A6EIG8_9SPHI Length = 828 Score = 541 bits (1394), Expect = e-152, Method: Compositional matrix adjust. Identities = 319/860 (37%), Positives = 504/860 (58%), Gaps = 60/860 (6%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M + ++ +LA+ AQSLA + N HL+ L+++E G + L S + + Sbjct: 1 MNISNISESVRLAIRVAQSLAKEYHNAEFSAAHLLKGLMHKEVGLIG-FLNSIDKDEAYI 59 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL--ES 118 ++ L +V DV+ +++ + D + K G + I+ + VL AL + Sbjct: 60 SEWAEVRIDELDKVAVAPDDVKGGREIAGIFEEADLVRIKLGLDLITP-VCVLTALCKPT 118 Query: 119 RGTLADILKAAGATTANI-------TQAIEQMRGGESVNDQ--GAEDQRQALKKYTIDLT 169 G D LK+ I T+ + ++ G +V+ + +E + AL KY ID Sbjct: 119 VGFPPDQLKSFPIKEKEILDLYLDDTELKQAVKPGTTVDAKTGSSEGAKAALHKYCIDRI 178 Query: 170 ERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVP 229 +A GK DP+IGRD+E R +++L RRTK N ++ G+ GVGKTA+V+GLAQ I++G VP Sbjct: 179 AQARDGKTDPIIGRDKETRMVLEILGRRTKPNVIITGDAGVGKTALVDGLAQDILSGNVP 238 Query: 230 EGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMV-GAGK 288 LK ++ LD+G+L+AGA Y+GE E+RLK +L ++ KQ ILFIDE+HT++ G Sbjct: 239 AILKNVQLFELDLGSLIAGASYKGEIEDRLKNILKEI-KQYDKAILFIDEIHTLLDNKGP 297 Query: 289 ADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIA 348 G + GN+LKP LARGE+ +GATT+DEYR+ IE + A RRF+ + V EP+ I Sbjct: 298 IGGGV--GNLLKPELARGEITVIGATTMDEYRKIIEPEQAFSRRFEVLQVQEPNEASAIK 355 Query: 349 ILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSK 408 +L L E+YE HH ++I AI L+ RY+ DR+LPD A DL+D ++++M D+ Sbjct: 356 MLEKLAEKYEQHHQLKIQKDAIPECVRLAKRYMKDRRLPDAAFDLLDRTMAAMKMMNDTS 415 Query: 409 PEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKAS 468 + L LD ++QL +EA ++ +++L+D Y +++++ Sbjct: 416 DQVLAELDADLLQL-----------NEA-----EVADDQLADYRWLYQQMQDKVSP---I 456 Query: 469 LSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQL-EGKTMRLL 527 L G T + +++ A E D + + L+A L E K Sbjct: 457 LVGQLTDETQVD----AFETVEEFKDY-------------ISRNLDALKVLAETK----- 494 Query: 528 RNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRS 587 ++V +IA +++ TGIP+ ++ E+EKLL ME L RV+GQ+ A+ +V++AI S Sbjct: 495 HDEVAKQDIASIVSYKTGIPLGKIQAQEKEKLLNMEGYLKKRVVGQDRALKSVADAILES 554 Query: 588 RAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLV 647 R+GL +PIGSF LGPTG GKTEL K++A F+F+ ++AM+R DMSEF E+HS + L Sbjct: 555 RSGLNKKGQPIGSFFLLGPTGTGKTELAKSIAEFLFNDEKAMIRFDMSEFKEEHSAALLY 614 Query: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTV 707 GAPPGYVGYEEGG L +R++PYSV+L DE+EKAHP VF+ LQ+LD+G + D G+ Sbjct: 615 GAPPGYVGYEEGGLLVNKIRQQPYSVLLFDEIEKAHPSVFDTFLQILDEGHMHDRLGKEG 674 Query: 708 DFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLG 767 DF N +++ TSN+GS+ I E+ + + ++ +++ +FRPEF+ R+ E+V F P+ Sbjct: 675 DFSNALILFTSNIGSEWIAEQLSK-SLVPTSQQLMEIMARHFRPEFLARLSEIVPFAPIS 733 Query: 768 EQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIEN 827 E ++ I +IQL+ L + L+++G I + A K+L+ +G+ P YGAR L I+ ++ Sbjct: 734 EDNVVRIFEIQLRSLVEALDKQGITFEIDEAATKMLALSGFTPKYGARQLSGVIRNELRR 793 Query: 828 PLAQQILSGELVPGKVIRLE 847 P+++ I+SG L G I+++ Sbjct: 794 PISKYIISGALKKGNFIQVK 813 >UniRef50_A7ZQR5 ClpA/ClpB family protein n=21 Tax=Proteobacteria RepID=A7ZQR5_ECO24 Length = 881 Score = 538 bits (1386), Expect = e-151, Method: Compositional matrix adjust. Identities = 306/699 (43%), Positives = 436/699 (62%), Gaps = 38/699 (5%) Query: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220 L ++T D+TE+A G++DPV GRD EIR+ + +L RR KNNP+L+GEPGVGKTA+VEGLA Sbjct: 198 LNRFTEDVTEKARSGRIDPVFGRDTEIRQMVDILSRRRKNNPILVGEPGVGKTALVEGLA 257 Query: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280 RI G VP+ LK + LD+G L AGA +GEFE+RLK V++ + K V+LFIDE Sbjct: 258 LRIAEGNVPDSLKTVHIRTLDLGLLQAGAGVKGEFEQRLKNVIDAVQKSPEPVLLFIDEA 317 Query: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340 HT++GAG G DA N+LKPALARGEL + ATT EY+QY E+DAALERRFQ V V E Sbjct: 318 HTIIGAGNQAGGADAANLLKPALARGELRTIAATTWSEYKQYFERDAALERRFQMVKVDE 377 Query: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400 P + +LRGLK RY HH V + D AI A LS RY+ RQLPDKA+DL+D A + Sbjct: 378 PDDDTACLMLRGLKARYAQHHGVHMLDSAIQTAVRLSRRYLTGRQLPDKAVDLLDTAGAR 437 Query: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKES---DEASKKRLDMLNEELSDKERQYSE 457 +RM +D+ PE L +L R+ L +E++A+ ++S EAS +RL L + + + + Sbjct: 438 VRMSLDTLPEPLTQLHARLAALDIEREAIEQDSVFYPEASPERLAELIDLRDELQAEAGH 497 Query: 458 LEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAAT 517 LE +++ EK T++ E + EL++QL Sbjct: 498 LETQYQQEKRLAQQIMTLRQEGTDST------------------------ELQQQLRTHQ 533 Query: 518 QLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAV 577 LL V +A V+A WTGIP+S ++ E+ LL MEQ L +RV+GQ+ A+ Sbjct: 534 GFAP----LLALDVDARAVATVVADWTGIPLSSLLRDEQSDLLSMEQSLENRVVGQSPAL 589 Query: 578 DAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEF 637 A++ +R ++ GL N P G FL GP+G GKTE LA+ +F +++++ I++SE+ Sbjct: 590 CAIAQRLRAAKTGLTPENGPQGVFLLTGPSGTGKTETALTLADTLFGGEKSLITINLSEY 649 Query: 638 MEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDG 697 E H+VS+L GAPPGYVGY +GG LTEAVR+RPYSV+LLDEVEKAH DV N+ QV D G Sbjct: 650 QEPHTVSQLKGAPPGYVGYGQGGVLTEAVRKRPYSVVLLDEVEKAHRDVMNLFYQVFDRG 709 Query: 698 RLTDGQGRTVDFRNTVVIMTSNLGSD----LIQERFGELDYAHMKELVLGVVSHNFRPEF 753 + DG+GR +DFRNTV++MT+NLGSD L++E+ D A + EL+ ++ +F+P Sbjct: 710 FMRDGEGREIDFRNTVILMTANLGSDHIMQLLEEKPDATD-ADLHELLYPLLREHFQPAL 768 Query: 754 INRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEER-GYEIHISDEALKLLSENGYDPVY 812 + R + V++ PLG++ + +I +++L ++ +RL + G E I+D L+ P Sbjct: 769 MARF-QTVIYRPLGQEAMRAIVEMKLAQVVRRLRQHYGLETEINDSLYDALTAACLLPDT 827 Query: 813 GARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNED 851 GAR + + QQI L+QQ+L+ + K +L + D Sbjct: 828 GARNIDSLLNQQILPVLSQQLLAQQAAHRKPAQLRLGWD 866 >UniRef50_B7VTU3 Chaperone ClpB n=1 Tax=Vibrio splendidus LGP32 RepID=B7VTU3_VIBSL Length = 897 Score = 533 bits (1373), Expect = e-149, Method: Compositional matrix adjust. Identities = 322/869 (37%), Positives = 483/869 (55%), Gaps = 44/869 (5%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 + RL ++AL DA +LA+ ++ H + +LL + LL+ + LR Sbjct: 10 IQRLHPIVKVALEDAAALAVSEKANEVQIEHYLLSLLERPNSDFDILLSHFDCSETILRQ 69 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLN---LCDKLAQKRGDNFISSELFVLAALES- 118 I LN G G S L+ L L L + I S +L + + Sbjct: 70 SIRSTLNT--NTTGNGSKPVFSSLLIEWLQESWLVSSL--DLSETQIRSGALLLTLVSNP 125 Query: 119 ----RGTLADILKAAGATTAN------ITQAIEQMRGGESVNDQGAEDQRQALKKYTIDL 168 + A IL+ T T ++E + D A + AL K+T D Sbjct: 126 LRYGQHGYASILEGVNPDTLKRNFSELTTNSLESLATTSEKTD--AREDGSALSKFTTDF 183 Query: 169 TERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEV 228 T +A +G++DPV RD+EIR+ I +L RR KNNP+ +GEPGVGKTA+VEGLA +I G+V Sbjct: 184 TGKARKGEIDPVFCRDQEIRQIIDILARRRKNNPIAVGEPGVGKTAVVEGLALKITEGDV 243 Query: 229 PEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGK 288 P+ LKG + LDMG L AGA +GEFE+RL VL+++ +ILFIDE HT+VG G Sbjct: 244 PDCLKGVELYGLDMGLLQAGASVKGEFEKRLNAVLDEVKNSPTPIILFIDEAHTLVGGGN 303 Query: 289 ADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIA 348 G DA N+LKPALARGE+ + ATT EY++Y EKD AL RRFQ V + EPS Sbjct: 304 QAGGSDAANLLKPALARGEVKTIAATTWSEYKKYFEKDPALARRFQLVKLDEPSASQAAL 363 Query: 349 ILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSK 408 I+RGL+ YE H+V + D AI AAA L+ RYI RQLPDKAID++D A + + + +++ Sbjct: 364 IIRGLRPAYEKSHNVYVRDDAITAAANLADRYITGRQLPDKAIDVLDTACARVNISLNAT 423 Query: 409 PEELDRLDRRIIQLK-----LEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWK 463 P ++ L + I LE+ L + D+ S + L E++ + + L+ +WK Sbjct: 424 PAPVETLHQEIAAANRELEALERDQLQQTGDKHSAALIPELKEKIEKATEEQATLQVQWK 483 Query: 464 AEKASLSGTQTIKAELEQAKIAI---EQARRVGDLARMSELQYGKIPEL----EKQLEAA 516 E++ + +++ L + A + + + + P E+Q A Sbjct: 484 KEQSLIQEIIELRSHLYSLTTPSTEEDSAPKADNTIQDDDALTSDKPNCHEYSEEQTREA 543 Query: 517 TQLEGK-------TMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHR 569 Q + T L+ +V EI+ V++ WTGIP+ +M++ E + L ++Q L Sbjct: 544 IQSCNERLDNVRGTNPLVHYEVGPDEISHVISDWTGIPMGKMLQDESQATLNLKQNLIQN 603 Query: 570 VIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAM 629 + GQ A+DA++ I+ ++AGL +P+ P G FL +GP+GVGKTE +A+A+ MF + M Sbjct: 604 IKGQEFAIDALAEGIQTAKAGLGNPDAPTGVFLLVGPSGVGKTETARAIADQMFGGERFM 663 Query: 630 VRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNI 689 I+MSEF EKH+VSRL+G+PPGYVG+ EGG LTEAVR+RPYSV+LLDEVEKA P+V N+ Sbjct: 664 TTINMSEFQEKHTVSRLIGSPPGYVGFGEGGMLTEAVRQRPYSVVLLDEVEKADPEVLNL 723 Query: 690 LLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQ---ERFGELDYAHMKELVLGVVS 746 QV D G L DG+GRT+DF+NT++IMTSNL + I+ + ++D + E + ++ Sbjct: 724 FYQVFDKGTLNDGEGRTIDFKNTLIIMTSNLATHEIESLVHQAKDIDANIVAEAIRPTLN 783 Query: 747 HNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLE-ERGYEIHISDEALKLLSE 805 +F+P + R+ V+ F PL + + I +LK++ +RL+ + D ++ + Sbjct: 784 QHFKPALLARM-SVLPFLPLSDAAMTDIIHHKLKKVSERLQSHHKLALCYGDNLVEFVLG 842 Query: 806 NGYDPVYGARPLKRAIQQQIENPLAQQIL 834 N GAR + I +Q+ L+ Q+L Sbjct: 843 NCRLAETGARNIDAVINRQLLPQLSTQLL 871 >UniRef50_C9M6K4 Negative regulator of genetic competence ClpC/MecB n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M6K4_9BACT Length = 826 Score = 531 bits (1369), Expect = e-149, Method: Compositional matrix adjust. Identities = 300/701 (42%), Positives = 427/701 (60%), Gaps = 75/701 (10%) Query: 150 NDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPG 209 N +G E + + ++ +DLT RA G+LDP++GR +E RR +QVL RRTKNNPVL+G+PG Sbjct: 160 NGEGDEAELAIIGQFCVDLTARAAAGELDPIVGRQKETRRLMQVLCRRTKNNPVLVGDPG 219 Query: 210 VGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQ 269 VGKTA+VEGLAQ I + VP+ LKG+++L L++G+LVAGAKYRG+FEER + ++ +K Sbjct: 220 VGKTAVVEGLAQLIQSEMVPDPLKGKKILQLNVGSLVAGAKYRGDFEERFQKLIAQASKS 279 Query: 270 EGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAAL 329 + ILFIDE+HT++G G A+G++DA NMLKP+LARGEL +GATT EYR+YIE+D AL Sbjct: 280 KD--ILFIDEIHTLIGTGNAEGSLDAANMLKPSLARGELRIIGATTAAEYRRYIERDGAL 337 Query: 330 ERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDK 389 ERRFQ + +AEP + +AI+ GL RYE HH V A A LS R++ Sbjct: 338 ERRFQPIDIAEPDFDSAVAIVSGLLPRYEEHHGVVYAPEAAETAVRLSSRFLT------- 390 Query: 390 AIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELS 449 DRR+ K +D+++E + Sbjct: 391 --------------------------DRRL-----------------PDKAIDLIDEAGA 407 Query: 450 DKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPEL 509 + S+ E K +K L Q + E A D + + E Sbjct: 408 KAQLDRSDWPPELK----------EVKTRLGQLRRDKEAAILAADFELAGRFRSDEA-ET 456 Query: 510 EKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHR 569 +QLE + + R+ ++V ++A+VL+ W G+PV +M +SE E+LL +E + Sbjct: 457 AQQLEENLSVWRRGRRMSGSRVGPDDLAQVLSSWCGVPVGQMSQSEAERLLTLESRVEKH 516 Query: 570 VIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAM 629 +IGQ+EAV V A+RR+R+GL D RPIGSFLFLGP+GVGKTEL + +A ++ SD+A+ Sbjct: 517 LIGQSEAVSCVCRALRRNRSGLQDEKRPIGSFLFLGPSGVGKTELARVVARELYGSDKAL 576 Query: 630 VRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNI 689 + +DMSEF ++++VSRL+G PGYVGYE+ G LTEAVRR PYSV+LLDE+EKA P V I Sbjct: 577 IALDMSEFHDRYTVSRLIGTGPGYVGYEDRGQLTEAVRRHPYSVVLLDEIEKADPQVNRI 636 Query: 690 LLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGS-DLIQERFGELDYAHMKELVLGVVSHN 748 LLQ+++DGRLTDG G TVDFRN ++IMTSNLGS + + FG D + GV+S Sbjct: 637 LLQIMEDGRLTDGHGDTVDFRNALIIMTSNLGSREAAKSPFGFSDAGRSDQAARGVMSDE 696 Query: 749 ----FRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE-ALKLL 803 F PE + R+D+VV F L + ++ I + L +RL+ RG + +S + L +L Sbjct: 697 LKRFFPPELLGRMDDVVYFRQLNAEDLSKIFDLLLAPAVQRLKRRGIDFSVSPQLKLAIL 756 Query: 804 SENGYDPVYGARPLKRAIQQQIENPLAQQIL-----SGELV 839 E GARPL+R +++++ +P A+ ++ SGELV Sbjct: 757 DEAARQGA-GARPLRRLVEKRVSDPTAEWLIANPGASGELV 796 >UniRef50_A7APH1 Clp amino terminal domain containing protein n=1 Tax=Babesia bovis RepID=A7APH1_BABBO Length = 1005 Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust. Identities = 287/733 (39%), Positives = 438/733 (59%), Gaps = 62/733 (8%) Query: 157 QRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIV 216 Q L +TID+T +AE+GKL V+ RD EI R+I+ L R+ K NP+LIGEPGVGKTA+V Sbjct: 261 QVSPLNAFTIDITRKAEEGKLQKVLCRDSEIDRSIRTLCRKYKRNPILIGEPGVGKTAVV 320 Query: 217 EGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILF 276 EG+A ++ G V E + +R+ LD+G LVAGA++RG+FEERL ++ ++ K N+IL Sbjct: 321 EGIAMQLREGHVLEKMLNKRLRQLDVGLLVAGARFRGQFEERLTRLIEEI-KNAKNIILV 379 Query: 277 IDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKV 336 IDE H +VGAG +GA+DA N+LKP LARGE+ C+ TT EY+++ EKDAAL RRFQ + Sbjct: 380 IDEAHMLVGAGAGEGALDAANLLKPTLARGEIQCIAITTPKEYQKHFEKDAALCRRFQPI 439 Query: 337 FVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDE 396 V EPS +DT IL E H+V+ A+ AA S ++I +R LPDKAID++DE Sbjct: 440 HVKEPSDKDTQIILNATAEACGRFHNVKYNMDAVAAALKYSKQFIPERYLPDKAIDILDE 499 Query: 397 AASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYS 456 A S ++ R QLK+E + + E + D+L + K Sbjct: 500 AGSLAKI-------------RFYEQLKVEWKHAVNPLKE--RGVYDVLTSNFA-KNANNE 543 Query: 457 ELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQY------GKI---- 506 +E + + K S + +A I ++ V D+A+M Y G I Sbjct: 544 AIESDVHSSKVS--------TQHSEANIGVDS---VTDVAKMPSQTYKGYHIDGSINFPA 592 Query: 507 ------PELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLL 560 + + + + + L +V +AEV++ WTG+P+ ++ + E E + Sbjct: 593 TDMISEENYDTEYTSNASWDSDSTETL-CEVNTEHVAEVVSNWTGVPLKKLTQGEIEAIR 651 Query: 561 RMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALAN 620 +EQELH V+G EAV ++ AIRR++ + +P RPIGSFLF GP GVGK+E+ K L Sbjct: 652 NLEQELHKSVVGHEEAVKNIAKAIRRAKTNIKNPERPIGSFLFCGPPGVGKSEIAKTLTK 711 Query: 621 FMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVE 680 MF D ++++DMSE+ E HS+SR++G+PPGY G++ GG LTE +R+ PYSV++ DE+E Sbjct: 712 LMFTEDN-LIKLDMSEYNEPHSISRILGSPPGYKGHDSGGQLTEKLRKNPYSVVMFDEIE 770 Query: 681 KAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE------RFG---- 730 KAH +V NILLQ+L+DG+LTD + +TV F+NT++IMTSN+GS +I++ FG Sbjct: 771 KAHRNVLNILLQILEDGKLTDSKNQTVSFKNTIIIMTSNVGSHIIEKAVRGIHTFGFNIE 830 Query: 731 ------ELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYK 784 + DY K+ V + F+PE I+RID+V++F PL EQ + IA++ ++ K Sbjct: 831 DVLNDKQTDYEKAKKQVCDELKSTFKPELIDRIDDVILFRPLNEQQMKQIAKLMIEATLK 890 Query: 785 RLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVI 844 R ++ G ++ + D + + + D GARP++R I +++ LA ++S + +PG Sbjct: 891 RAKDAGIDVVVDDSFIDHIMKLPRDATGGARPIRRLITTHLDDQLADFVISKDYIPGIKY 950 Query: 845 RLEVNEDRIVAVQ 857 R+ V+ + + ++ Sbjct: 951 RITVDSNAQIKIK 963 >UniRef50_A6V7C9 Type VI secretion ATPase, ClpV1 family n=10 Tax=Gammaproteobacteria RepID=A6V7C9_PSEA7 Length = 875 Score = 530 bits (1364), Expect = e-148, Method: Compositional matrix adjust. Identities = 296/704 (42%), Positives = 433/704 (61%), Gaps = 17/704 (2%) Query: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220 L+++T +LT++A GKLDPV+ RD IR+ + +L RR KNNP+++GE GVGKTAIVEGLA Sbjct: 166 LQRFTHNLTQQARDGKLDPVLCRDGAIRQMVDILARRRKNNPIVVGEAGVGKTAIVEGLA 225 Query: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280 RI GEVP L+ +L+LDMG L AGA +GEFE RLKGV++++ ILFIDE Sbjct: 226 SRIAAGEVPPALRDVELLSLDMGLLQAGASVKGEFERRLKGVIDEVKAALRPTILFIDEA 285 Query: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340 HT++GAG G DA N+LKPALARGEL + ATT EY++Y EKD AL RRFQ V + E Sbjct: 286 HTLIGAGGQAGGSDAANLLKPALARGELRTIAATTWAEYKKYFEKDPALARRFQPVQLHE 345 Query: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400 PSV + + ILRGL YE H + + D A+VAAA LS RY+A RQLPDKA+D++D A + Sbjct: 346 PSVAEAVTILRGLARVYEESHGIYLRDDAVVAAAELSARYLAGRQLPDKAVDILDTACAR 405 Query: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEA---SKKRLDMLNEELSDKERQYSE 457 +R+ + + PE L+RL + + + ++QAL ++++ + L +L E L+ E + Sbjct: 406 VRISLAAAPESLERLRGELAEGERQRQALRRDAEAGLPIDHEALQVLEERLAQAESERHV 465 Query: 458 LEEEWKAEKASLSGTQTIKAELEQAKIAI-EQARRVGDLARMSELQYGKIPELEKQLE-- 514 LE++W ++ ++ +L +A+ A E+ D ++G + LEK L Sbjct: 466 LEDQWSRQRELAERLLALRQQLARAREASREEQGGEADAEAFPADEHGGVEALEKALHET 525 Query: 515 ----AATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRV 570 A Q +G RL+ +V +AEV++ WTG+PV ++ K++ +L R+ Sbjct: 526 RQALADAQAQG---RLVSFEVCPRLVAEVISAWTGVPVEQLAREHNAKVVGFADDLRARI 582 Query: 571 IGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMV 630 GQ +A+ A+ ++R + +GL P+ P G FL +GP+GVGKTE ALA+ ++ + + Sbjct: 583 RGQEQAIRALDRSMRATASGLNKPDAPAGVFLLVGPSGVGKTETALALADLLYGGERFIT 642 Query: 631 RIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNIL 690 I+MSEF EKHSVSRL+GAPPGYVGY EGG LTEAVR++PYSV+LLDEVEKA PDV N+ Sbjct: 643 TINMSEFQEKHSVSRLIGAPPGYVGYGEGGMLTEAVRQKPYSVVLLDEVEKADPDVLNLF 702 Query: 691 LQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE--RFGELDYAH-MKELVLGVVSH 747 Q+ D G DG+G +DFRNT+ +MTSNL S+ I R GE +++ + V+S Sbjct: 703 YQIFDRGVANDGEGHEIDFRNTLFLMTSNLASERIAALCRDGERPSPEILEDTIRPVLSQ 762 Query: 748 NFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENG 807 +F+P + R+ VV ++P+G + + + I+L RL +RL R S + L E Sbjct: 763 HFKPALLARM-RVVPYYPVGGRVLRELIGIKLDRLGERLARRHLAFDYSSALVDHLGERC 821 Query: 808 YDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNED 851 GAR + + + +A ++L +++R+ D Sbjct: 822 IQSDSGARLIDHLLDTHLLPLVADRLLQAMARDERLVRVHATLD 865 >UniRef50_C2BFB3 ATP-binding ClpB chaperone n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BFB3_9FIRM Length = 843 Score = 529 bits (1362), Expect = e-148, Method: Compositional matrix adjust. Identities = 293/828 (35%), Positives = 486/828 (58%), Gaps = 28/828 (3%) Query: 14 LADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQALNRLPQ 73 + +A +A+ +N + LH+ A+L E + + + D AL +L Sbjct: 14 IKEANKVAIRKNNVEVSDLHIFYAILTLEEKLIRTYFKELKVIYQDVLDDTENALTKLRS 73 Query: 74 VEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL-ESRGTLADILKAAGAT 132 +G + S+ R L + +++++ + + I +E +LA L E+ A + G T Sbjct: 74 AKGISS-LYTSRSYQRALLIAEEISRNQFEEKIKTEHLMLALLREADMPTAKLAATHGLT 132 Query: 133 TANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQ 192 N + + + + E + ++ L+KY LT+ A +G+LDPVIGR+EE R I+ Sbjct: 133 YKNFNELVAK-KFNEYLLKGVDQETIINLEKYGTVLTKEAIEGRLDPVIGREEETRTAIR 191 Query: 193 VLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYR 252 +L RR KNNPVLIG+ GVGKTAIVEG+ QRI+ G+VP+ LK + + +LDM +LVAGAKYR Sbjct: 192 ILSRRIKNNPVLIGDAGVGKTAIVEGIVQRIVAGDVPDDLKDKIIFSLDMTSLVAGAKYR 251 Query: 253 GEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVG 312 G+FEERLK +L + +G +ILFIDE+H ++G+G A G MD NMLKP LARG++ +G Sbjct: 252 GDFEERLKKILEIIKDSKGRIILFIDEIHNIIGSGSASGTMDTANMLKPMLARGDILTIG 311 Query: 313 ATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVA 372 ATT++EYR+YIE D AL+RRFQK+ + EPS+E TIAI+RG+K +YE HH ++ITDPA+ Sbjct: 312 ATTIEEYRKYIEVDKALDRRFQKILIEEPSIETTIAIMRGIKSKYENHHMIKITDPALTE 371 Query: 373 AATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKE 432 A LS R++ +R+LPD AID+IDEA + ++M D KPEELD L R+IIQL++E AL E Sbjct: 372 AVKLSKRFLTERKLPDVAIDVIDEACAQVKMARDQKPEELDELHRKIIQLEMENIALKNE 431 Query: 433 SDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRV 492 D S R E++ + E++ + + + EK ++ E++ IE+A+ Sbjct: 432 KDSLSNHRSKEKEEKIKELEKELEKKTDLYNKEKERQETIVKLEREIDIIGFEIEEAKDK 491 Query: 493 GDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMM 552 D + + K EK + Q E LR KV +E+ +++++ +G+P S++ Sbjct: 492 RDFENLDKFVSLKDNVSEKLKKIENQGE---FYPLRTKVGVSEVKDIISKMSGMPKSKLQ 548 Query: 553 ESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKT 612 + + + + ++L +G ++ +D + N + GL + ++P+ SF+ GP+ GK+ Sbjct: 549 YDKLDSINIVREKLKEEFVGGDDMIDKIINTYIIAEGGLFERSKPVLSFIVTGPSSSGKS 608 Query: 613 ELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYS 672 + K LA+++++ D++++ DMSEF +K S+++L+GAPPGYVGYE GG LT+A+R +PYS Sbjct: 609 YIAKLLADYLYEGDKSLLSFDMSEFTDKSSITKLIGAPPGYVGYEFGGVLTQALRTKPYS 668 Query: 673 VILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL--GSDLIQERFG 730 V++ + +E AH +V N++LQ++ DG + D +GR ++ +N++V++T + G + +E+ Sbjct: 669 VLVFENIENAHFEVQNLVLQIVQDGTIKDNKGRDINLKNSIVVLTMTVEDGDESAKEKL- 727 Query: 731 ELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERG 790 ++D+ +D V L + + + + K L K L ER Sbjct: 728 DVDFGKY-------------------VDYVFKLKRLDDDKLDKLISLNFKELEKALAERQ 768 Query: 791 YEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGEL 838 + + + D + AR LK+ I+Q + + ++ L+ E+ Sbjct: 769 INLSYAGGFFDKFGKYAKDEGFDARSLKKLIEQDVYFLICEKNLTSEI 816 >UniRef50_Q1N528 ATPase with chaperone activity, ATP-binding subunit n=1 Tax=Bermanella marisrubri RepID=Q1N528_9GAMM Length = 859 Score = 527 bits (1357), Expect = e-148, Method: Compositional matrix adjust. Identities = 335/848 (39%), Positives = 486/848 (57%), Gaps = 58/848 (6%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAG-INAGQLR 61 +++LT +++L +A LA+ H N +E H ++LN L+ I LR Sbjct: 10 IEKLTPTLKMSLEEAAQLAMTHGNFNVEIEHWFISMLNHPHTDFLELIKKCQVIELDNLR 69 Query: 62 TDINQALNRLPQVEGTGGDVQP--SQDLVRVLNLCDKLAQKRGDN-FISSELFVLAALES 118 D+ +L Q +G P S+ L+ LN LA D I+S +AA+++ Sbjct: 70 EDLAASL----QYFESGNTRAPAFSRHLMECLNEAWLLASVDQDKEQITSAHIFIAAMKN 125 Query: 119 RGTLADI--------------LKAAGATTANITQ--AIEQMRGGESVNDQGAEDQRQALK 162 G I L+A T T AIE + ES + Q L Sbjct: 126 SGIAHQIRSIVPSLDGVNVADLEALSHTIIGKTSESAIESPQSSESTQSKQGNTQANYLS 185 Query: 163 KYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQR 222 KY +DLT +AE G++DPVIGRD+E+R+ + VL RR +NNP+L GEPGVGKTA+VEGLA R Sbjct: 186 KYAVDLTAKAEAGEIDPVIGRDDEVRQLVDVLLRRRQNNPILTGEPGVGKTAVVEGLANR 245 Query: 223 IINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHT 282 I+ +VP+ L+G R+L+LDM +L AGA +GEFE+RLK V+ ++ +I+FIDE HT Sbjct: 246 IVANDVPQPLQGIRLLSLDMASLQAGASVKGEFEKRLKAVIEEVKTATVPIIVFIDEAHT 305 Query: 283 MVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPS 342 ++GAG A+G DA N+LKPALARGE + ATT EY++Y EKD AL RRFQ V V EPS Sbjct: 306 IIGAGGAEGTGDAANLLKPALARGEFRTIAATTWSEYKKYFEKDPALTRRFQVVKVEEPS 365 Query: 343 VEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIR 402 +E I ++R L E HH+V I D AI A+ L+ RYI RQLPDK++ L+D A + + Sbjct: 366 IESAIDMMRSLASTLEQHHNVTILDEAIEASVKLAARYIPARQLPDKSVSLLDTACARVA 425 Query: 403 MQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEW 462 + + P ++ RRI Q + + L KES S+ L+E++ E+Q E E E Sbjct: 426 LSQGATPSAIEIEQRRIEQSQTNLRLLQKESHINSQ-----LDEKIEFYEKQIREAESEL 480 Query: 463 KAEKASLSGTQTIKAELEQAKIA-IEQARRVGDLARMSELQYGKIPELEKQLEAATQLEG 521 A + L E EQA I I++AR G+ EL QL+A ++G Sbjct: 481 VALEDQL--------EKEQAIIGQIKEAREKGE----------SQDELADQLKA---IQG 519 Query: 522 KTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVS 581 ++ + + V +A ++ WTGIPV MM+ E LL +E EL RV+GQ+ A+ ++ Sbjct: 520 ESPLVFLD-VDKQAVAAIIESWTGIPVGNMMQDEINGLLSLEDELKKRVVGQDHAMQKIA 578 Query: 582 NAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKH 641 A+R SR+GL DP +P+G F+ G +G GKTE ALA ++ ++ ++ I+MSEF E+H Sbjct: 579 QAVRISRSGLTDPRKPVGVFMMAGTSGTGKTETALALAEHLYGGEDNLITINMSEFKEEH 638 Query: 642 SVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTD 701 VS L+GA GYVGY +GG LTEAVR++PYSV+LLDE+EKAHP + ++ + D G + D Sbjct: 639 KVSMLLGASAGYVGYGQGGVLTEAVRKKPYSVVLLDEMEKAHPGIQDVFYNLFDKGTIKD 698 Query: 702 GQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAH--MKELVLGVVSHNFRPEFINRIDE 759 G+G +DF+NT++IMT+N + I + FGE D + E + + +FRP F+ R Sbjct: 699 GEGNDIDFKNTLIIMTTNAATHGISKYFGETDINEEALLEDIRPELLEDFRPAFLGRCT- 757 Query: 760 VVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEA--LKLLSENGYDPVYGARPL 817 +V + PL E + I +I ++ KRL E+ Y + +A L+ L DP GAR + Sbjct: 758 IVPYFPLSEDVLQKIIEINFNKIKKRLNEQ-YNASLKYDASILEHLLSKCKDPDTGARNV 816 Query: 818 KRAIQQQI 825 + I + I Sbjct: 817 ENVINKSI 824 >UniRef50_D1Y1U8 Chaperone protein ClpB 1 n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y1U8_9BACT Length = 829 Score = 526 bits (1354), Expect = e-147, Method: Compositional matrix adjust. Identities = 292/710 (41%), Positives = 438/710 (61%), Gaps = 16/710 (2%) Query: 14 LADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQALNRLPQ 73 A+A+++A+ D+ I LHL A+L Q+ + L AG++ + +AL Sbjct: 14 FAEAKNIAIRCDHAEITDLHLSLAILRQKESEIKYRLLEAGVDLLSYERKLTEALQDRRA 73 Query: 74 VEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAGATT 133 G + S+ R++ + ++++ D ++ + LA L R + + + A T Sbjct: 74 TPGVS-KLYYSRQYHRIVLVSGEISRASFDAYVRTPHLYLAILRDRESPSAAIAAEFGVT 132 Query: 134 ANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQV 193 Q++ R S + +Q + L ++ + + A +G +DPV+GRDEEI +V Sbjct: 133 VESVQSMLAARLTASDELGISPEQMEQLNRFGRNFLKEAREGLMDPVLGRDEEINECFRV 192 Query: 194 LQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRG 253 L RR KNNPVLIGE GVGKTA+ EG+AQRI + P L+GR V +LDM ALVAG KYRG Sbjct: 193 LSRRLKNNPVLIGEAGVGKTAVAEGIAQRIAKQDAPALLRGRMVFSLDMAALVAGTKYRG 252 Query: 254 EFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGA 313 +FEERLK +L + +G +ILF+DELHT++GAG G+MD N+LKP LARGE+ +GA Sbjct: 253 DFEERLKEILEIIKASKGRIILFVDELHTIIGAGSGSGSMDTSNILKPFLARGEILMIGA 312 Query: 314 TTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAA 373 TT++EYR+YIE D ALERRFQK+ + EPS E +++LRG+ +YE HH V+I D A++AA Sbjct: 313 TTVEEYRRYIEPDRALERRFQKILIEEPSEEAALSMLRGVVSKYETHHRVRIADGALIAA 372 Query: 374 ATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKES 433 LS RYI DR LPDKAIDLIDEA + +RM +DS P+ELD +RRIIQ ++E L+ E+ Sbjct: 373 IQLSKRYITDRYLPDKAIDLIDEAGAMVRMSMDSMPQELDEWNRRIIQWEMEHILLLDEA 432 Query: 434 DEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIE---QAR 490 D A+++R L ++L+D+ +Y E W+ E L +K ++ + ++E +A Sbjct: 433 DPAAQRRRQTLEKQLADERARYEERFAAWQKEVERLDELSRLKELRDEVRRSLEDAQEAH 492 Query: 491 RVGDLAR-MSELQY--GKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIP 547 RV D+ R ++E Q KI E+E+ G + R +VT+ EI ++A GIP Sbjct: 493 RVDDVKRFVAERQAFDAKIAEIERI--------GPHYPVSR-EVTEEEIKRIVAVRAGIP 543 Query: 548 VSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPT 607 +S + SE EKL + + L +G +AV AV +I R+R+GL RP+GSFL +GP+ Sbjct: 544 LSSIGRSESEKLEQAGKSLLAEFVGHRDAVSAVRQSILRARSGLMKRRRPVGSFLLVGPS 603 Query: 608 GVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVR 667 G GK+ L + A ++ + + + +M EF +K SV++L+GAPPGYVG++ G LTEAVR Sbjct: 604 GTGKSYLAELFAKHYYEDERSPLSFNMREFTDKASVNKLIGAPPGYVGHDAAGALTEAVR 663 Query: 668 RRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMT 717 RP+SVI+ + V+ A +V +++ ++ DG + D +GRTVDFRN ++ T Sbjct: 664 LRPHSVIVFESVDHAGAEVLSLIARLAADGEIADNRGRTVDFRNALLFFT 713 >UniRef50_A7JYI1 ATPases with chaperone activity, ATP-binding subunit n=15 Tax=Gammaproteobacteria RepID=A7JYI1_VIBSE Length = 892 Score = 525 bits (1352), Expect = e-147, Method: Compositional matrix adjust. Identities = 290/704 (41%), Positives = 439/704 (62%), Gaps = 29/704 (4%) Query: 154 AEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKT 213 A + AL K+T D T +A +G++DPV RD+EIR+ + +L RR KNNP+ +GEPGVGKT Sbjct: 169 AREDGSALSKFTTDFTGKARKGEIDPVFCRDQEIRQIVDILARRRKNNPIAVGEPGVGKT 228 Query: 214 AIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNV 273 A+VEGLA +I+ G+VP+ LKG + LDMG L AGA +GEFE+RL VL+++ + Sbjct: 229 AVVEGLALKIVQGDVPDNLKGVELYGLDMGLLQAGASVKGEFEKRLNAVLDEVKNSPTPI 288 Query: 274 ILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRF 333 ILFIDE HT+VG G G DA N+LKPALARGE+ + ATT EY++Y EKD AL RRF Sbjct: 289 ILFIDEAHTLVGGGNQAGGSDAANLLKPALARGEVKTIAATTWSEYKKYFEKDPALARRF 348 Query: 334 QKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDL 393 Q V + EPS E I+RGL+ YE H+V + D AI AAA LS RYI+ RQLPDKAID+ Sbjct: 349 QLVKLDEPSPEQAALIIRGLRPAYEKSHNVYVRDDAITAAAALSARYISGRQLPDKAIDV 408 Query: 394 IDEAASSIRMQIDSKPEELDRLDRRIIQLK-----LEQQALMKESDEASKKRLDMLNEEL 448 +D A + + + +++ P ++ L + + + LE+ AL + D+ S + L + Sbjct: 409 LDTACARVNISLNAIPASVETLQQELAAQQRELEALERDALQQTGDKHSLANIPDLELAM 468 Query: 449 SDKERQYSELEEEWKAEKASLSGTQTIKAEL---------EQAKIAIEQARRVGDLARMS 499 + + +E E +W EK + +++ L E+ +A E + + D++ + Sbjct: 469 ETTKEELAEQEAQWHKEKEQIQEMIALRSRLHELVFGETNEEELVAEEDSEQEQDVSPYA 528 Query: 500 ELQYG----KIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESE 555 E+ I ++QL+A L+ +V E++ V++ WTGIP+ +M++ E Sbjct: 529 EMDEEAVRIAISACQEQLDAIR----NGNPLVHFEVGPDEVSHVISDWTGIPMGKMLQDE 584 Query: 556 REKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELC 615 E L++++ L + GQ A+DA+S I+ ++AGL +P+ P G FL +GP+GVGKTE Sbjct: 585 AETTLKLKESLTQSIKGQEYAIDALSEGIQTAKAGLGNPDAPTGVFLLVGPSGVGKTETA 644 Query: 616 KALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVIL 675 +++A+ MF + M I+MSEF EKH+VSRL+G+PPGYVGY EGG LTEAVR+RPYSV+L Sbjct: 645 RSIADQMFGGERFMTTINMSEFQEKHTVSRLIGSPPGYVGYGEGGMLTEAVRQRPYSVVL 704 Query: 676 LDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQ---ERFGEL 732 LDEVEKA P+V N+ QV D G L DG+GRT+DF+NT++IMTSNL + I+ + ++ Sbjct: 705 LDEVEKADPEVLNLFYQVFDKGTLNDGEGRTIDFKNTLIIMTSNLATHEIESLVHQSKDI 764 Query: 733 DYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYE 792 D + E + ++ +F+P + R+ V+ F PL ++ + I +L ++ +RL+ ++ Sbjct: 765 DANIIAEAIRPTLNQHFKPALLARMS-VLPFVPLSDEAMTEIIHHKLNKVSQRLQSH-HK 822 Query: 793 IHISDEA--LKLLSENGYDPVYGARPLKRAIQQQIENPLAQQIL 834 + +S E ++ + N GAR + I +Q+ L+ Q+L Sbjct: 823 LSLSYEESLVEFVLGNCRLAETGARNIDAVINRQLLPQLSTQLL 866 >UniRef50_A6FFT5 Putative ATPase with chaperone activity n=1 Tax=Moritella sp. PE36 RepID=A6FFT5_9GAMM Length = 865 Score = 525 bits (1351), Expect = e-147, Method: Compositional matrix adjust. Identities = 296/732 (40%), Positives = 440/732 (60%), Gaps = 36/732 (4%) Query: 136 ITQAIEQMRGGESVNDQG--AEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQV 193 IT+ + G +V++ G + +L ++T+DLTE+A GK+DP++GRD EIR+ + + Sbjct: 153 ITEKSAEQNGIVAVSNAGVATNSKTPSLDQFTVDLTEKARNGKMDPILGRDPEIRQMVDI 212 Query: 194 LQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRG 253 L RR +NNP+L GE GVGKTA+VEGLAQRI+ +VPE L+ ++ LD+ L AGA +G Sbjct: 213 LTRRRQNNPILTGEAGVGKTAVVEGLAQRIVAKDVPESLQHVQLRELDLALLQAGAGMKG 272 Query: 254 EFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGA 313 EFE RLK VLN++ + +ILFIDE HTM+GAG A G DA N+LKPALARGEL + A Sbjct: 273 EFENRLKAVLNEVKQSATPIILFIDEAHTMIGAGGAAGQNDAANILKPALARGELRTIAA 332 Query: 314 TTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAA 373 TT EY++Y EKD AL RRFQ V + EPSV + +LRG+ E HH V IT A+ AA Sbjct: 333 TTWAEYKKYFEKDPALTRRFQVVKIEEPSVPTAVIMLRGILPVMEQHHDVVITADALQAA 392 Query: 374 ATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKE- 432 LS RYI RQLPDKA+ L+D A + + + + P ++ L R+ QL+ E + L +E Sbjct: 393 VALSKRYINGRQLPDKAVALLDSACARVAISQAATPGLVEDLQRKKAQLEAEIKLLEREQ 452 Query: 433 -SDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARR 491 S E + L +L E + WK + +EL Q AI+Q + Sbjct: 453 LSGEDHGDVIIALQSDLVGVEDNLVVELQAWKTQ-----------SELVQ---AIQQ--Q 496 Query: 492 VGDLARMSELQ--YGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVS 549 + D+ Q Y ++ L+ +L A ++ +V + I EV++ WTGIP+ Sbjct: 497 IADIHEHGAEQEKYIRLTALKAELHEAKN------TMVYWQVDEQVICEVISDWTGIPLG 550 Query: 550 RMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGV 609 +M + E E +L + E+ RVIGQ+ A+D ++ ++ SRA L+D ++P G F+ GP+GV Sbjct: 551 KMAQDELETVLNLSAEMKTRVIGQDHAIDLIARTVQISRAQLSDESKPNGIFMLTGPSGV 610 Query: 610 GKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRR 669 GKTE LA ++ S+E ++ I+MSE+ E+H VS L+G+PPGYVG+ EGG LTEAVRR Sbjct: 611 GKTETALTLAEQVYGSEENIITINMSEYKEEHKVSLLLGSPPGYVGFGEGGVLTEAVRRN 670 Query: 670 PYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERF 729 PYSV+LLDE++KA P V +I Q+ D G + DG+GR +DF+NT++IMTSN+G+D I F Sbjct: 671 PYSVVLLDEIDKAAPGVQDIFYQIFDKGCVKDGEGRDIDFKNTIIIMTSNVGTDTITALF 730 Query: 730 GELDYA----HMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR 785 + D A + + + G + F+P F+ R + ++ F PL + +++IAQ+Q+ RL R Sbjct: 731 ADPDTAPELDSLADCIKGDLMAAFKPAFLGRAN-IIPFVPLTDDMLSTIAQLQINRLAAR 789 Query: 786 L-EERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSG--ELVPGK 842 + E + +E + + +D GAR + +Q + ++ Q+L + Sbjct: 790 IRRNHNAEFIVDNEVITQIVSRCHDVASGARTIHNYLQNTLLPEISVQVLQAMTQQTEFS 849 Query: 843 VIRLEVNEDRIV 854 I + NED + Sbjct: 850 QINVTTNEDNFI 861 >UniRef50_Q2SEG4 ATPase with chaperone activity, ATP-binding subunit n=63 Tax=Bacteria RepID=Q2SEG4_HAHCH Length = 919 Score = 520 bits (1338), Expect = e-145, Method: Compositional matrix adjust. Identities = 325/857 (37%), Positives = 501/857 (58%), Gaps = 36/857 (4%) Query: 7 TNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQ 66 T+ + +L D LA + +E H++ +L Q + +L G++ G++ +++Q Sbjct: 14 TSVVRKSLEDGLRLAQQERHSSLEIEHVLLKVLEQSDSDLDRVLEQLGVDIGKVSRELSQ 73 Query: 67 ALNRLPQVEGTGGDVQPSQDLV-RVLNLCDKLAQ-KRGDNFISSELFVLAALESRGTLAD 124 + + + D+ P LV L LA + G NFISS + AA+ S T+ + Sbjct: 74 TVGKFHR--DNPRDMVPFSPLVVDALKAGWLLASVEMGVNFISSA-HLFAAVMSHNTMRN 130 Query: 125 ILKAAGATTANITQAIEQ-MRGGESVNDQGAED------------------QRQALKKYT 165 L ++ T I+ +E+ + ++V Q +E Q AL+KYT Sbjct: 131 QLLSSVKTLQEIS--LEKVLPAVKAVTGQSSESRAYLKAAAGGGAPAAPTAQGGALQKYT 188 Query: 166 IDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIIN 225 ++LTERA ++DPV+GRD EIR+ I +L RR +NNP+L GE GVGKTA+VEGLA RI Sbjct: 189 VNLTERALNNEIDPVLGRDPEIRQCIDILTRRRQNNPILTGEAGVGKTAVVEGLALRIAQ 248 Query: 226 GEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVG 285 +VPE L+G + LD+G L AGA +GEFE+RLK V+ ++ +I+FIDE HTM+G Sbjct: 249 KDVPEPLQGVHIHVLDLGLLQAGASMKGEFEQRLKSVIEEVKASPAPIIMFIDEAHTMIG 308 Query: 286 AGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVED 345 AG +G DA N+LKPALARGEL + ATT EY++Y E+D AL RRFQ V V EP+ Sbjct: 309 AGGKEGQGDAANLLKPALARGELRTIAATTWAEYKKYFERDPALTRRFQVVKVEEPTEAV 368 Query: 346 TIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQI 405 I +LRG+ + +HH+V+I+D AI+ A LS RYI RQLPDK + L+D A + + + Sbjct: 369 AIDMLRGISKILAIHHNVRISDDAIIQAVKLSARYIPGRQLPDKGVSLLDTACARVSLSQ 428 Query: 406 DSKPEELDRLDRRIIQLKLEQQALMKESDEASK--KRLDMLNEELSDKERQYSELEEEWK 463 + P ++ RRI Q+ + +E+ + + + L++L EE + E + E+W+ Sbjct: 429 SATPSLIEDTRRRIQQIDTNLDLISQENISSGEYHETLELLTEEKAVLEASLAAQTEQWE 488 Query: 464 AEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKT 523 EK ++ ++ +LEQ A + GD R+S+ + ++ K L AA Sbjct: 489 KEKDLIAKILEVRTKLEQDYQAKKGPEDAGD--RLSDEEVAELQVEFKNLFAALASAQGD 546 Query: 524 MRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNA 583 L+ V +AEV+A WTGIPV +M+ E +L + ++L RVIGQ+ A++A++ A Sbjct: 547 QPLMMPHVDGQAVAEVVANWTGIPVGKMVSDEINGILNLHEQLEKRVIGQSHALEAIAQA 606 Query: 584 IRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSV 643 IR SRAGL DP +PIG FL +GP+GVGKTE ALA+ +F ++ + I+M+EF E+H V Sbjct: 607 IRTSRAGLTDPRKPIGVFLMVGPSGVGKTETALALADTLFGGEQNLTVINMAEFKEEHKV 666 Query: 644 SRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQ 703 S L+G+PPGYVGY EGG LTEA RR+PYSVILLDE+EKAH V ++ + D G + DG+ Sbjct: 667 SMLLGSPPGYVGYGEGGVLTEAARRKPYSVILLDEMEKAHQGVQDVFYNLFDKGSIKDGE 726 Query: 704 GRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHN----FRPEFINRIDE 759 GR +DF+NTV+IMTSN G + I+ + + +++L + H F+P F+ R + Sbjct: 727 GRDIDFKNTVIIMTSNAGEEAIRAICAQSEEKPEPDVMLDSMRHELLKYFKPAFLGRAN- 785 Query: 760 VVVFHPLGEQHIASIAQIQLKRLYKRLEER-GYEIHISDEALKLLSENGYDPVYGARPLK 818 V+ ++PL ++++ I +I + R+ +R+ G ++ L + + GAR ++ Sbjct: 786 VITYYPLDDENLFKICRINMDRIARRVRNHYGAAFTYDEDVLLNIVARSQEVDTGARNIE 845 Query: 819 RAIQQQIENPLAQQILS 835 + + + L+ + LS Sbjct: 846 HILNRTVLPELSTECLS 862 >UniRef50_Q21KI1 ATPase AAA-2 n=7 Tax=Gammaproteobacteria RepID=Q21KI1_SACD2 Length = 897 Score = 518 bits (1334), Expect = e-145, Method: Compositional matrix adjust. Identities = 321/850 (37%), Positives = 500/850 (58%), Gaps = 36/850 (4%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 L+N+ + + +LA + +I+ H ++ L +E + +L ++ ++ D++ Sbjct: 21 LSNESKELFEKSIALASSRSHFYIDVEHWLTEALAEEQREIIAILKHFNVDVDRVHADLD 80 Query: 66 QALNRLPQVEGTGGDVQP--SQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL-ESRGTL 122 AL TG D P S D+VR+L +A + + + +L AL +S G Sbjct: 81 LALENTK----TGNDGFPKISPDIVRLLFEAWMIASSQYASVQVLPVHILLALVDSAGLK 136 Query: 123 ADILKAAGATTA----NITQAIEQMRGGESVNDQGAEDQRQ-----ALKKYTIDLTERAE 173 I K + A I E + GE++ DQG ++ +L ++T +LT++A+ Sbjct: 137 TKIGKISKQFEAISGEEIRTQCETLLRGEALQDQGEATNKKLTKTPSLDQFTTNLTQQAK 196 Query: 174 QGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLK 233 GK+D ++GRD+EIR+ I VL RR +NNP+L GE GVGKTA+VEGLA +I G+VP ++ Sbjct: 197 DGKIDSILGRDDEIRQIIDVLCRRKQNNPILTGEAGVGKTAVVEGLAVKIAQGDVPTAIE 256 Query: 234 GRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAM 293 + +LD+G L AGA +GEFE RLK V+ ++ + ++ILFIDE HT++GAG G+ Sbjct: 257 NVEIRSLDLGLLQAGAGVKGEFENRLKNVIKEVQQSVQSIILFIDEAHTLIGAGNQAGSG 316 Query: 294 DAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGL 353 DA N+LKPALARGEL + ATT EY++Y E DAAL RRFQ V V EPSV+ I +LR Sbjct: 317 DAANLLKPALARGELRTIAATTWAEYKKYFESDAALTRRFQVVKVEEPSVDKAIIMLRNA 376 Query: 354 KERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELD 413 E HH V I D A+ A+ LSHRYI RQLPDK + L+D A + + + ++ P + Sbjct: 377 APTLEQHHKVVILDAAVSASVNLSHRYIPGRQLPDKCVSLLDTACARVNLSQNTTPARIV 436 Query: 414 RLDRRIIQLKLEQQALMKESD---EASKKRLDMLNEELSDKERQYSELEEEWKAEKASLS 470 + + I ++ E + L +E++ E S +++ +++ ER Y L W+ EK ++ Sbjct: 437 QYSQEIKNIEFEIERLNQEAEKGYEHSASIVELEVKKVGITER-YQSLCARWEQEKQIIN 495 Query: 471 GTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNK 530 + + + E E+ + + ++L I EL +L++ + + L+ Sbjct: 496 QINSAREKAE------EKVQDSDNEESATDLTNTLIAELRVKLKSIS----GSQPLIYEC 545 Query: 531 VTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590 V + +AEV+A WTGIPV RM E + +L +EQ + RVIGQ+ + +S A++ +RA Sbjct: 546 VDEQVVAEVVADWTGIPVGRMQSDEIQNVLSLEQTMEKRVIGQSHGLKLISKAVQTARAK 605 Query: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAP 650 L+DP RP+G F+ +GP+GVGKTE LA ++ S++ M I+MSEF E+H VS L+G+P Sbjct: 606 LSDPKRPLGVFMLVGPSGVGKTETALTLAEQLYGSEQNMTVINMSEFKEEHKVSMLMGSP 665 Query: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFR 710 PGYVGY EGG LTEAVRR+PYSV+LLDE+EKAHP V +I QV D G L DG+GR +DF+ Sbjct: 666 PGYVGYGEGGVLTEAVRRKPYSVVLLDEMEKAHPGVQDIFYQVFDKGILRDGEGRDIDFK 725 Query: 711 NTVVIMTSNLGSDLIQERF----GELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPL 766 NTV+IMTSN S I++ + + + E + G + ++P F+ RI+ ++ ++PL Sbjct: 726 NTVIIMTSNTASAQIEQLCIDPETKPEPKALLEAIEGTLRETYKPAFLGRIN-LIPYYPL 784 Query: 767 GEQHIASIAQIQLKRLYKRLEER-GYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQI 825 EQ ++ IA +QL + +R+E E++ SD+ ++ + GAR + + + Sbjct: 785 DEQCLSEIAVMQLHAIQQRVETNYKVELNYSDKLVEHVVSLCAQSDTGARKISALLNNTL 844 Query: 826 ENPLAQQILS 835 LA++IL+ Sbjct: 845 LPVLAEKILT 854 >UniRef50_B8EIH7 Type VI secretion ATPase, ClpV1 family n=56 Tax=Proteobacteria RepID=B8EIH7_METSB Length = 904 Score = 518 bits (1334), Expect = e-145, Method: Compositional matrix adjust. Identities = 298/696 (42%), Positives = 431/696 (61%), Gaps = 38/696 (5%) Query: 152 QGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVG 211 QGA+ AL +++ DLT RA G++DPV+GRD+EIR+ I VL RR +NNP+L GE GVG Sbjct: 182 QGAKGT-TALDRFSQDLTARAATGEMDPVLGRDDEIRQIIDVLMRRRQNNPILTGEAGVG 240 Query: 212 KTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEG 271 KTAIVEGLAQRI +VP L+G R+LALD+ + AGA +GEFE+RL+ V++++ Sbjct: 241 KTAIVEGLAQRIAASDVPPALRGVRLLALDITLMQAGASMKGEFEQRLRSVIDEVQASPK 300 Query: 272 NVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALER 331 +ILFIDE HT++GAG A G DA N+LKPALARG L + ATT EYRQY EKD AL R Sbjct: 301 PIILFIDEAHTLIGAGGAAGTGDAANILKPALARGTLRTIAATTWAEYRQYFEKDPALTR 360 Query: 332 RFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAI 391 RFQ V V EP V +LRG+ E HH V+I+D AIVAA LSHRYI R LPDKA+ Sbjct: 361 RFQPVQVDEPDVARCCVMLRGVLAPMEKHHKVRISDAAIVAAVNLSHRYIPARLLPDKAV 420 Query: 392 DLIDEAASSIRMQIDSKPEELDRLDRRII--QLKLEQQALMKESD--EASKKRLDMLNEE 447 L+D + + + ++ P ++ D R+ L+ E+ AL ++D + ++R+ ++ E Sbjct: 421 SLLDTTCARVAISQNATPAAVE--DARVAANALEAEKAALTTDADLGDLDEERIGEIDAE 478 Query: 448 LSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIP 507 L++ + + + LEEEW E+A + ++ E+ + EQ +RV +++ L G P Sbjct: 479 LAELKEKSAALEEEWAKERALIEEIVKLRREISENPADAEQ-KRVALRDKIASLG-GVDP 536 Query: 508 ELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELH 567 E R++ V D +A V++ WTGIPV RM++ E E +LR+ + L+ Sbjct: 537 E---------------KRMIYAHVDDQSVAAVVSDWTGIPVGRMVKDEIENVLRLPEILN 581 Query: 568 HRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDE 627 RV+GQ+ + ++ I +RAGL +P++PIG F+ GP+GVGKTE ALA ++ ++ Sbjct: 582 RRVVGQSHGLAMIAKRIETNRAGLDNPSKPIGVFMLCGPSGVGKTETALALAEALYGGEQ 641 Query: 628 AMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVF 687 ++ I+MSEF E H+VS L GAPPGYVGY EGG LTEAVRR+PYSV+LLDE+EKAHPDV Sbjct: 642 NIITINMSEFQEAHTVSGLKGAPPGYVGYGEGGRLTEAVRRKPYSVVLLDEIEKAHPDVH 701 Query: 688 NILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSH 747 + QV D G + DG GR +DF+NT++I+TSN+G+D I R + +A E + + Sbjct: 702 ELFFQVFDKGVMEDGTGRRIDFKNTLIILTSNVGTDTIMRRAEDPAFAGDAEALAAELRP 761 Query: 748 N----FRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLE-----ERGYEIHISDE 798 + F P + R+ + + PL +A I ++QL R+ KR+ + Y+ + D Sbjct: 762 DLLQVFPPALLGRL-VTIPYLPLSPSMLAGIVRLQLGRIGKRIRAAQDADFSYDDAVVDH 820 Query: 799 ALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQIL 834 + L + DP G R + I + L+++ L Sbjct: 821 IVSLCN----DPDSGGRIIDNIINNTLLPALSREFL 852 >UniRef50_Q9I742 Protein clpV1 n=17 Tax=Proteobacteria RepID=CLPV1_PSEAE Length = 902 Score = 518 bits (1333), Expect = e-145, Method: Compositional matrix adjust. Identities = 317/809 (39%), Positives = 468/809 (57%), Gaps = 63/809 (7%) Query: 26 NQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQALNRLP-----------QV 74 N ++E +H +L + ++ +GI+ +L D+ +AL+RLP V Sbjct: 33 NPYVELVHWFHQILQLPDSDLHQIVRQSGIDPARLAKDLTEALDRLPRGSTSITDLSSHV 92 Query: 75 E------GTGGDVQPSQDLVR----VLNLCDKLAQKRGDNFISSELFVLAALESRGTLAD 124 E G + + VR V+ + + + +S+E A L+ Sbjct: 93 EEAVERGWVYGSLMFGESQVRTGYLVIGILKTPSLRHALTGLSAEF---AKLKVEALTER 149 Query: 125 ILKAAGATTANITQAIEQMRGGESVNDQG------AEDQRQALKKYTIDLTERAEQGKLD 178 + GA+ N A + G + + A +++ALK++T+DLTE+A GKLD Sbjct: 150 FDEYVGASPENGLSASDGFNAGAAPGEASGALAPSAMGKQEALKRFTVDLTEQARSGKLD 209 Query: 179 PVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVL 238 P++GRDEEIR+ + +L RR +NNP+L GE GVGKTA+VEG A RI+ G+VP LK + Sbjct: 210 PIVGRDEEIRQLVDILMRRRQNNPILTGEAGVGKTAVVEGFALRIVAGDVPPALKDVELR 269 Query: 239 ALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNM 298 ALD+G L AGA +GEFE+RL+ V+ D+ E +ILFIDE HT+VGAG A G DA N+ Sbjct: 270 ALDVGLLQAGASMKGEFEQRLRQVIEDVQSSEKPIILFIDEAHTLVGAGGAAGTGDAANL 329 Query: 299 LKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYE 358 LKPALARG L V ATT EY+++IEKD AL RRFQ V V EPS I ++RG+ E Sbjct: 330 LKPALARGTLRTVAATTWAEYKKHIEKDPALTRRFQVVQVDEPSEHKAILMMRGVASTME 389 Query: 359 LHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418 HH VQI D A+ AA LSHRYI RQLPDK++ L+D A + + + + P E+D RR Sbjct: 390 KHHQVQILDEALEAAVRLSHRYIPARQLPDKSVSLLDTACARTAISLHAVPAEVDDSRRR 449 Query: 419 IIQLKLEQQALMKES--DEASKKRLDMLNEELSDKERQYSELEEEWKAEK---------- 466 I L+ E + +ES A+ +R L+++ + + LE+ W EK Sbjct: 450 IEALETELAIIRRESAIGVATAERQRNAETLLAEERERLAALEQRWAEEKRLVDELLETR 509 Query: 467 ----ASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGK 522 A+ L + ++ +++ +R AR++ELQ QL A L+G+ Sbjct: 510 ARLRAAAEAVDAGGVPLGEGEVRLDEEQRQALHARLAELQ--------AQLSA---LQGE 558 Query: 523 TMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSN 582 +L V +A V+A WTGIPV RM +E E +L +++ L R+IGQ+ A++ ++ Sbjct: 559 EPLILPT-VDYQAVASVVADWTGIPVGRMARNEIETVLNLDRHLKKRIIGQDHALEMIAK 617 Query: 583 AIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHS 642 I+ SRAGL +P++PIG F+ G +GVGKTE ALA M+ ++ ++ I+MSEF E H+ Sbjct: 618 RIQTSRAGLDNPSKPIGVFMLAGTSGVGKTETALALAEAMYGGEQNVITINMSEFQEAHT 677 Query: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702 VS L GAPPGY+GY EGG LTEAVRR+PYSV+LLDEVEKAHPDV I QV D G + DG Sbjct: 678 VSTLKGAPPGYIGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVHEIFFQVFDKGVMEDG 737 Query: 703 QGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHN----FRPEFINRID 758 +GR +DF+NT++++T+N G+++I + + E + + F P + R+ Sbjct: 738 EGRVIDFKNTLILLTTNAGTEMIASLCADPELMPEPEAIAKSLREPLLKIFPPALLGRL- 796 Query: 759 EVVVFHPLGEQHIASIAQIQLKRLYKRLE 787 + ++PL + + +I+++QL R+ KR+E Sbjct: 797 VTIPYYPLSDDMLKAISRLQLGRIKKRVE 825 >UniRef50_D2QJP1 ATPase AAA-2 domain protein n=12 Tax=Bacteria RepID=D2QJP1_9SPHI Length = 828 Score = 517 bits (1331), Expect = e-145, Method: Compositional matrix adjust. Identities = 322/864 (37%), Positives = 491/864 (56%), Gaps = 60/864 (6%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 MR LT + AL A++LA + N+ + HL+ A+L+ + G S LL + + + Sbjct: 1 MRQLPLTEPVEKALHIARALAREYHNEQLTAAHLLRAVLHDDVGG-SALLRALDQDVAYI 59 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQD--LVRVLNLCDKLAQKRGDNFISSELFVLAALES 118 + + P+ +P QD + RVLN D K G +++ + VL AL Sbjct: 60 FDWADVWIEEQPR--SALAITEPLQDESVERVLNEADFFRVKLGLDYVEL-ICVLTALTK 116 Query: 119 RGT--LADILKAAGATTANIT----QAIEQMRGGESVNDQG-AEDQRQALKK-----YTI 166 G A+ L++ ++ + + R + + G + LK Y I Sbjct: 117 PGVGFTAEQLRSFPLQERDLLDRFLRDLSTPRATDKTSSNGNGQAALPGLKTKGQFPYCI 176 Query: 167 DLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIING 226 D T +A KLDPV+GR +E+R +++L RR+K N +++G+PGVGK+A+++GLAQ I+ G Sbjct: 177 DKTAQARAKKLDPVVGRKQEVRTMLEILGRRSKPNVMVVGDPGVGKSALLDGLAQLIVEG 236 Query: 227 EVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGA 286 +VP +K +L LD GAL+AGA Y+GE E+RLK VL ++ +QE ILFIDE+HT++ Sbjct: 237 QVPARMKNAILLELDSGALLAGASYKGEVEDRLKSVLKEVRQQE-MCILFIDEIHTLLDP 295 Query: 287 GKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDT 346 K N+LKP LARGEL VGATTL+EYR+ IE D AL RRF+ + V EP+ + Sbjct: 296 -KGSAGNGIANLLKPELARGELTVVGATTLEEYRKLIEPDQALSRRFELLNVTEPTEQVA 354 Query: 347 IAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQID 406 ++RGL YE HH ++I + A L+ RY +R+LPD A+DL+D ++IR+ I+ Sbjct: 355 ERMIRGLIPVYEQHHKLEIQPDVVAACIRLARRYSKERRLPDSALDLLDRTMAAIRIAIE 414 Query: 407 SKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEK 466 + EL +L++ + +L +SD + LD E ++ + + + Sbjct: 415 TSETELTQLEKAVQELS--------QSDLPPGEALD---------EYRWIDTQLHHQISP 457 Query: 467 ASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRL 526 L + LE A + L R EL ++P Sbjct: 458 VLLGNWEDTINPLEIETPAAYHDYIMAKLRRFRELAGQQVP------------------- 498 Query: 527 LRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRR 586 VT ++ V+A TGIP+ ++ E+E+LL ME L RV+GQN A+ A+S+AI Sbjct: 499 ---VVTANDLVAVVAHKTGIPMGKVQGQEKERLLSMESFLQRRVVGQNHALRALSDAILE 555 Query: 587 SRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRL 646 SR+GL +PIGSF LGPTG GKTEL K+LA+F+F+ + A++R DMSEF E+HS + L Sbjct: 556 SRSGLQRAGQPIGSFFLLGPTGTGKTELSKSLADFLFNDERALIRFDMSEFKEEHSAALL 615 Query: 647 VGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRT 706 GAPPGYVGYEEGG L +R++PYSV+L DE+EKAH VF++ LQ++D+GRL D G+ Sbjct: 616 YGAPPGYVGYEEGGLLVNKIRKQPYSVVLFDEIEKAHGSVFDVFLQIMDEGRLHDKLGKE 675 Query: 707 VDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPL 766 DF N ++I TSN+ S+ I F ++L + ++ FRPEF+ RI E++ F P+ Sbjct: 676 GDFTNALLIFTSNISSEWITNEFQAGRMPTSQQL-MTRMTGQFRPEFLARITEIIPFSPI 734 Query: 767 GEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIE 826 E+++ I +IQL L K L ++G + ++ EA + L+ G+ P YGARPL I+ Q+ Sbjct: 735 QEENVVRIFEIQLAHLQKSLVQQGVTLTLTKEANRQLALQGFSPHYGARPLAGIIRNQLR 794 Query: 827 NPLAQQILSGELVPGKVIRLEVNE 850 P+++ ++SG+L G+ + L+ NE Sbjct: 795 RPISRLLISGQLQKGQSLNLDWNE 818 >UniRef50_D2QZM9 Type VI secretion ATPase, ClpV1 family n=6 Tax=Bacteria RepID=D2QZM9_9PLAN Length = 915 Score = 511 bits (1317), Expect = e-143, Method: Compositional matrix adjust. Identities = 297/732 (40%), Positives = 441/732 (60%), Gaps = 48/732 (6%) Query: 153 GAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGK 212 A +++ALK+++IDLTERA +G++DP++GRDEEIR+ + +L RR +NNP+L GE GVGK Sbjct: 186 AAMGKQEALKQFSIDLTERARKGEIDPIVGRDEEIRQLVDILMRRRQNNPILTGEAGVGK 245 Query: 213 TAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGN 272 TA+VEG A RI +G+VP LK + +LD+G L AGA +GEFE RL+ V+ ++ E Sbjct: 246 TAVVEGFALRIASGDVPPSLKDVSLRSLDIGLLQAGASMKGEFENRLRQVIEEVQSSEQP 305 Query: 273 VILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERR 332 +ILFIDE HT++GAG A G DA N+LKPALARG+L V ATT EY+++IEKD AL RR Sbjct: 306 IILFIDEAHTLIGAGGAAGTGDAANLLKPALARGKLRTVAATTWAEYKKHIEKDPALTRR 365 Query: 333 FQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAID 392 FQ V V EPS + I ++RG+ E HH VQI D A+ A+ LSHRYI RQLPDK++ Sbjct: 366 FQVVQVGEPSEDKAILMMRGMASTLEQHHRVQILDEALEASVRLSHRYIPARQLPDKSVS 425 Query: 393 LIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEA--SKKRLDMLNEELSD 450 L+D + + + + P E++ R+I L++EQ + +E + KR ++ +L+ Sbjct: 426 LLDTTCARVAISQHAVPAEVEDCRRKIEALEVEQGIIAREKAVGVDTTKREKEVDSKLAI 485 Query: 451 KERQYSELEEEWKAEKASLSGTQTIKAEL--EQAKI------------------------ 484 + + LE+ W EK + I+ +L + K+ Sbjct: 486 ERERLKGLEQRWTDEKTLVDEILDIRGKLRGQTGKVEGTHSKLEKAADKAAKEAPPVAAP 545 Query: 485 --AIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLAR 542 + +A R LA+++ELQ T L+G++ +L V + +A V+A Sbjct: 546 TPPLTEAERAPLLAKLTELQ-----------AKLTALQGESPLILPT-VDEQAVASVVAD 593 Query: 543 WTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFL 602 WTGIPV RM+++E E +L++ + L RVIGQ+ A+ ++ I+ SRA L +PN+PIG FL Sbjct: 594 WTGIPVGRMVKNEVEAVLKLAETLGQRVIGQDHAMKMIARRIQTSRAQLENPNKPIGVFL 653 Query: 603 FLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYL 662 G +GVGKTE ALA ++ ++ ++ I+MSEF E H+VS L G+PPGYVGY EGG L Sbjct: 654 LAGTSGVGKTETALALAEALYGGEQNVITINMSEFQEAHTVSTLKGSPPGYVGYGEGGIL 713 Query: 663 TEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGS 722 TEAVRR+PYSV+LLDEVEKAH DV + QV D G + DG+GR +DF+NT++++TSN GS Sbjct: 714 TEAVRRKPYSVVLLDEVEKAHGDVHELFFQVFDKGWMEDGEGRVIDFKNTLILLTSNAGS 773 Query: 723 DLIQERFGELDYAHMKELVLGVVSHN----FRPEFINRIDEVVVFHPLGEQHIASIAQIQ 778 DLI + + E + + F + R+ + ++PL + IA+I ++Q Sbjct: 774 DLIMNMCKDPELLPDPEAIAKSLRDPLLKVFPAALLGRL-VTIPYYPLSDSMIAAITRLQ 832 Query: 779 LKRLYKRLE-ERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGE 837 L+R+ KR+ SDE LKL+ + G R + + + ++++IL Sbjct: 833 LRRIEKRIGVNHKVPFTYSDEVLKLIVSRCTELESGGRMIDSILTNTMLPAISEEILKRM 892 Query: 838 LVPGKVIRLEVN 849 +V V ++E+ Sbjct: 893 MVGSAVKKIEIT 904 >UniRef50_A8YTL4 ATP-dependent protease n=26 Tax=Lactobacillus RepID=A8YTL4_LACH4 Length = 707 Score = 510 bits (1313), Expect = e-143, Method: Compositional matrix adjust. Identities = 299/673 (44%), Positives = 423/673 (62%), Gaps = 82/673 (12%) Query: 166 IDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIIN 225 +DL E A++ DPVIGRDE+I I++L RR KNNPVLIG GVGKT+IVEGLA+RI + Sbjct: 65 VDLVEEAKKNNFDPVIGRDEQIDNVIEILSRRKKNNPVLIGPAGVGKTSIVEGLAERIAS 124 Query: 226 GEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVG 285 G VP + ++++++ +VAG+ RG FEERLK V+ D AK + N++LFIDELH +VG Sbjct: 125 GNVPAKMANMHIISVNINDMVAGSSLRGSFEERLKKVI-DKAKSDPNIVLFIDELHNIVG 183 Query: 286 AGKADGAM---DAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPS 342 AG D DA N+LKPALA G+L +GATT E+ Q IEKD AL RRFQ V V EP+ Sbjct: 184 AGSTDSENNNGDAANILKPALANGDLKLIGATTTSEF-QRIEKDPALSRRFQAVQVPEPT 242 Query: 343 VEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIR 402 + I IL+GLK++YE +HHV+ +D ++ A LS RYI R LPDKAIDL+DEA + Sbjct: 243 TDVAIKILKGLKKKYEDYHHVKYSDDSLKLAVELSERYIQGRYLPDKAIDLMDEAGA--- 299 Query: 403 MQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEW 462 ++ L++ +DE + K Q S LE + Sbjct: 300 ----------------------KKALLVQPTDEKNLK-------------NQISALEAK- 323 Query: 463 KAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGK 522 K+E A KAE D + E++ KI ELEKQL+ ++ K Sbjct: 324 KSEAA--------KAE---------------DYDKAGEIK-TKIAELEKQLK---NVDTK 356 Query: 523 TMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSN 582 + +VT+ +I ++ + T IP+S + E +K L + ++L VI Q+ A+D +++ Sbjct: 357 NIP----EVTEKDIYAIIEQKTKIPMSELHADEAQKNLDLAKKLKKNVIDQDRAIDVITD 412 Query: 583 AIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHS 642 AI R + D +RP GSFL GPTGVGKTEL K LA +F + + ++R+DMSE+ ++ + Sbjct: 413 AIARKQI-FKDSDRPTGSFLLTGPTGVGKTELAKQLAIQLFGNKDHLIRLDMSEYQDEMA 471 Query: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702 V++L+G+ PGYVGY EGG LTE VR +PYS+IL DE+EKA+P VFN LLQ++DDGRLTD Sbjct: 472 VNKLIGSAPGYVGYGEGGQLTEKVRHQPYSLILFDEIEKANPQVFNALLQIMDDGRLTDA 531 Query: 703 QGRTVDFRNTVVIMTSNLG-SDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVV 761 QGRTV F++T++IMTSN G SD + E G++D ++ ++ + + FRPEF+NR+D +V Sbjct: 532 QGRTVSFKDTILIMTSNAGFSDKLLED-GKVD----QDKLISALENYFRPEFLNRLDAIV 586 Query: 762 VFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAI 821 F+ L EQ + I I LK++ L ++G + +SDEA L+E GYD +GARPL+R + Sbjct: 587 PFNSLTEQDMGKIINIYLKKMSHVLAKKGVTVEVSDEAKNFLAEKGYDKKFGARPLRRVV 646 Query: 822 QQQIENPLAQQIL 834 +Q +E P A+ IL Sbjct: 647 EQNLETPAAKLIL 659 >UniRef50_B6EJJ8 Chaperone ClpB-1 n=12 Tax=Proteobacteria RepID=B6EJJ8_ALISL Length = 872 Score = 509 bits (1310), Expect = e-142, Method: Compositional matrix adjust. Identities = 326/856 (38%), Positives = 479/856 (55%), Gaps = 43/856 (5%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 + RLT + +L A + + IE H LL Q + G+ + + Sbjct: 10 VKRLTPGMKASLEAAAGECVQRGHFSIEFEHWFVQLLQQPTVGWQKAVEQTGMASESILE 69 Query: 63 DINQALNRLPQVEGTGGDVQPS--QDLVRVLNLCDKLAQKRGDNFISSELFVLAALESR- 119 +N L+ LP+ G D PS LV +L + +E VL L+ R Sbjct: 70 QLNNHLSSLPR----GNDSAPSLSPQLVELLKDAWMIGSLNHAQLSMNEFHVLIVLKQRI 125 Query: 120 ------GTLADILKAAGATTAN---ITQAIEQMRGGESV---NDQGAEDQRQ--ALKKYT 165 G L+ +K+ + N IT+ S+ +QG E AL KY+ Sbjct: 126 EQGAYNGALSTWIKSLSSEWLNRQSITKTASSHLSSTSMLCGKNQGMEGNMSTPALDKYS 185 Query: 166 IDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIIN 225 +LT+ A G LDP+ GR EIR+ I +L RR +N+P+L+G+PGVGKTAIVEGLAQ+I++ Sbjct: 186 QNLTQAARNGDLDPISGRGNEIRKAIDILCRRRQNSPILVGDPGVGKTAIVEGLAQQIVD 245 Query: 226 GEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVG 285 G VP LK + LD+ L AGA +GEFE RLK V+N++ + +I+FIDE HT++G Sbjct: 246 GNVPPALKNVELRNLDLSLLQAGASIKGEFENRLKDVINEIKQSATPIIVFIDEAHTLIG 305 Query: 286 AGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVED 345 AG A G DA N+LKPALARGE + ATT EY+QY E DAAL RRFQ V + EPS D Sbjct: 306 AGGAAGQNDAANILKPALARGEFRSIAATTWAEYKQYFESDAALSRRFQVVSIGEPSEGD 365 Query: 346 TIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQI 405 I +L G+K E HH+V++ AI AA +LS RY+ +R+LPDKAI L+D A S I + Sbjct: 366 AIHMLSGVKTCLEKHHNVKVMQEAINAAVSLSIRYLPERKLPDKAISLLDTACSRIGLSQ 425 Query: 406 DSKPEELDRLDRRIIQLKLEQQALMKESDEAS--KKRLDMLNEELSDKERQYSELEEEWK 463 + P +L+ + +I ++ E L E+ S RL+ + + L D + Q+ E+ + W+ Sbjct: 426 SAPPRQLEAVAEQICYVENEITTLNHEAALWSIDDDRLEQVQQRLIDLQEQHQEIGKCWE 485 Query: 464 AEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSE--LQYGKIPELEKQLEAATQLEG 521 EK + ++ +L+ EQ DL+ + L K+ EL A Q Sbjct: 486 QEKTLVEEIIVLQTKLD------EQFLNGDDLSENEDKFLLAIKMTELH-----AIQ--- 531 Query: 522 KTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVS 581 L+ +V + IAEV++ WTGIPV M++ E E L+ +E+ + RVIGQ + +S Sbjct: 532 DDQPLVLPQVNEQTIAEVISLWTGIPVGNMLKEEVEHLMHLEKHIGERVIGQIAPIAEIS 591 Query: 582 NAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKH 641 AIR SRAGL D +P+G FL GP+GVGKTE AL + ++ + I+M+EF E+H Sbjct: 592 KAIRMSRAGLTDLRKPVGVFLMCGPSGVGKTETALALTDLLYGGKRNITTINMTEFKEEH 651 Query: 642 SVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTD 701 VS L+G+P GYVGY +GG LTEAVR+ PYSV+LLDE+EKAHP V +I Q+ D G ++D Sbjct: 652 KVSTLLGSPAGYVGYGKGGVLTEAVRKNPYSVLLLDEMEKAHPGVHDIFYQIFDKGSISD 711 Query: 702 GQGRTVDFRNTVVIMTSNLGSDLIQERF--GELDYAHMKELVLGVVSHNFRPEFINRIDE 759 +GR VDFRNT++IMTSN + G + + + + + + F+P F+ R Sbjct: 712 SEGREVDFRNTIIIMTSNAADSAVVNGCADGRPSISILTKAIFPELQNFFKPAFLGRTT- 770 Query: 760 VVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISD-EALKLLSENGYDPVYGARPLK 818 +V + PL ++ ++ IAQ+ L+R+ KR+++ D + ++LL P GAR ++ Sbjct: 771 IVPYFPLNDEEMSKIAQLSLRRIEKRIKQHYNATFDYDTQVIELLVSMNQSPETGARAIE 830 Query: 819 RAIQQQIENPLAQQIL 834 + I +Q+ LA Q + Sbjct: 831 QLINRQLMPELANQCI 846 >UniRef50_C9XYK6 Chaperone protein clpB n=1 Tax=Cronobacter turicensis RepID=C9XYK6_CROTZ Length = 924 Score = 509 bits (1310), Expect = e-142, Method: Compositional matrix adjust. Identities = 292/676 (43%), Positives = 410/676 (60%), Gaps = 24/676 (3%) Query: 160 ALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGL 219 +L +Y+ D+T A +GK+DPV+GRD EI I +L RR +NNP+L G+ GVGKTA+VEGL Sbjct: 220 SLAQYSTDVTALAREGKIDPVLGRDREISTIIDILLRRRQNNPLLTGDAGVGKTAVVEGL 279 Query: 220 AQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDE 279 A I G+VP L R+L+LD+ AL AGA +GEFE RLK VL + A E VILF+DE Sbjct: 280 ACAISRGDVPPSLCDVRLLSLDIVALSAGASMKGEFEARLKAVLEEAASSEQPVILFVDE 339 Query: 280 LHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVA 339 +H ++GAG + G DA N+LKPALARG+L +GATT E++++IEKD AL RRFQ + V Sbjct: 340 IHNLIGAGNSAGTGDAANLLKPALARGQLRTIGATTWSEFKRHIEKDPALTRRFQVLQVE 399 Query: 340 EPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAAS 399 EP +LRG+ ELHH+V I D A+ AA LSHR+I RQLPDKAI L+D A + Sbjct: 400 EPDENSATDMLRGMVPVLELHHNVWILDEALRAAVKLSHRFIPSRQLPDKAISLLDTACA 459 Query: 400 SIRMQIDSKPEELDRLDRRI----IQLKLEQQA-LMKESDEASKKRLDMLNEELSDKERQ 454 + + + P L L +I QL L +A + D+AS +D L + + ++ Sbjct: 460 RVAVGQHTPPYVLQELKYQIESANRQLSLATKASTFGKEDQAS---IDTLKSVIKLRSKE 516 Query: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLE 514 + LE W EK S+S +A L+ + Q V D A LQ + E+E QL Sbjct: 517 ANSLESRWLQEKTSVSEIIAARATLQH----LCQNEEV-DRAEREALQQALL-EIEAQLN 570 Query: 515 AATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574 A + ++ +V+ +A +++ WTGIPV +M++ E + + L RV GQ Sbjct: 571 AIRHEQA----MVHTEVSAEVVAAIVSEWTGIPVGQMLQDEMNIVRELPVRLAERVTGQT 626 Query: 575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 634 A+ +S I +R GLADP RP G F+ GP+G GKTE A+A M+ + ++ I+M Sbjct: 627 FALKQISERILMARTGLADPVRPTGVFMLTGPSGTGKTETALAIAENMYGGEHNLITINM 686 Query: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694 SE+ E H+VS L G+PPGYVGY EGG LTEAVRR+PYSVILLDE+EKAHPDV + QV Sbjct: 687 SEYQEAHTVSALKGSPPGYVGYGEGGILTEAVRRKPYSVILLDEIEKAHPDVHELFFQVF 746 Query: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSD----LIQERFGELDYAHMKELVLGVVSHNFR 750 D GR+ DG+GR +DFRNT++++TSN+GS+ L ++ D + L+ + F Sbjct: 747 DKGRMEDGEGRLIDFRNTIILLTSNVGSEKISLLCRDENTVPDEEGLLTLLHNDLLKVFP 806 Query: 751 PEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRL-EERGYEIHISDEALKLLSENGYD 809 F+ R+ V+ + PL + I ++QLKR+ RL E + +DEA++ + E + Sbjct: 807 AAFLGRVT-VIPYLPLKSDALMLIVKMQLKRVANRLYENHNVTLQYNDEAVRYIVEQCHV 865 Query: 810 PVYGARPLKRAIQQQI 825 GAR L R I+Q+I Sbjct: 866 AETGARILIRYIEQKI 881 >UniRef50_B7H4I2 Type VI secretion ATPase, ClpV1 family n=26 Tax=Bacteria RepID=B7H4I2_ACIB3 Length = 893 Score = 508 bits (1309), Expect = e-142, Method: Compositional matrix adjust. Identities = 337/896 (37%), Positives = 506/896 (56%), Gaps = 79/896 (8%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQE-GGSVSPLLTSAGINAGQLR 61 + +L+ + AL + + + N IE HL LLNQ + LL I+A L Sbjct: 9 ITKLSTAARTALEKSANACVLQQNYEIEIEHLFLELLNQPLENDLKILLKKYKISADALA 68 Query: 62 TDINQALNRLPQVEGTGGDVQP--SQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESR 119 D+ + +++LP+ G P ++ +VR+ LA + I S ++A L Sbjct: 69 DDLKETISQLPK----GNTRTPIFAKSIVRLFEQAWLLASAEQNPVIRSGHLLVALL--- 121 Query: 120 GTLADILKAAG-ATTANITQAIEQMRGG-------------ESVNDQGAEDQRQA----- 160 T D+ + A A++ I+ M+ ES A++ QA Sbjct: 122 -TAPDLYQIATRASSLFDLFPIDSMKHKFLEICEKSVEQQEESKTSSQADELEQAATPTA 180 Query: 161 -------LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKT 213 L +YTI+LTE+A+ G +DPVIGR+ EIR + +L RR +NNP+L GEPGVGKT Sbjct: 181 KTQKTPALDQYTINLTEKAKNGGIDPVIGREYEIRLMLDILMRRRQNNPILTGEPGVGKT 240 Query: 214 AIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNV 273 A+VEGLA +I G VPE LK + LDMG L AGA +GEFE RLK V+ ++ + Sbjct: 241 AVVEGLALKIAQGLVPEALKNVHLHVLDMGLLQAGASVKGEFENRLKQVIQEVQSSAHPI 300 Query: 274 ILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRF 333 ILFIDE HT++GAG G DA N+LKPALARGEL + ATT EY+QY EKDAAL RRF Sbjct: 301 ILFIDEAHTLIGAGGQAGQNDAANLLKPALARGELRTIAATTWAEYKQYFEKDAALSRRF 360 Query: 334 QKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDL 393 Q V V EP+ E + +LR + + H ++QI D AIV A SHRYI+ RQLPDKA+ + Sbjct: 361 QVVKVEEPTEEVAVDMLRAMIPVMQKHFNLQIDDEAIVTAVHASHRYISGRQLPDKAVSV 420 Query: 394 IDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEAS--KKRLDMLNEELSDK 451 +D AA+ + + +++P +LD+L + LKLEQQ L E + +RL+ L +L Sbjct: 421 LDTAAARVALTQNAQPVKLDQLKAQEHNLKLEQQILENEHRQIPIHHERLENLKNQLESL 480 Query: 452 ERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQ----YGKIP 507 + + E +E+W+ E +E R++ +L S Y +I Sbjct: 481 QSEIQETQEQWQKE--------------------LELVRKIQELEAQSHSNESEAYDQIN 520 Query: 508 ELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELH 567 + K L ++G+ L+ +V I E+++ WTGIPV +M+ E +++L +E +L Sbjct: 521 LIRKDL---ADIQGQ-QPLVFERVNSQIINEIISDWTGIPVGKMVNDEIKQILTLEDKLG 576 Query: 568 HRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDE 627 RV+GQ+ A+ + I+ S+A L DPN+P G FL +GP+GVGKTE ALAN ++ ++ Sbjct: 577 ERVMGQDYALTQLVQGIKTSKAKLEDPNKPQGVFLLVGPSGVGKTETALALANELYGGEQ 636 Query: 628 AMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVF 687 ++ I+MSE+ E H+VS L GAPPGYVGY +GG LTEAVRR PYSV+LLDE+EKAH DV Sbjct: 637 HLITINMSEYQEAHTVSSLKGAPPGYVGYGQGGVLTEAVRRNPYSVVLLDEIEKAHSDVQ 696 Query: 688 NILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGEL---DYAHMKELVLGV 744 + QV D G L DG+GR +DF+NT +++TSN GS I + ++ ++L+ + Sbjct: 697 ELFYQVFDKGTLEDGEGRVIDFKNTTILLTSNTGSSAIMQACLNQPVEEWPTAEDLIEHL 756 Query: 745 ---VSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEER-GYEIHISDEAL 800 + F+P F+ R+ +V + PL + + I + +L ++ R+E++ G E+ SD+ + Sbjct: 757 KPSLYKQFKPAFLGRM-RIVPYFPLHDDLLVRIIKHKLGKITARIEKQYGTEVQYSDDLV 815 Query: 801 KLLSENGYDPVYGARPLKRAIQQQIENPLAQQI---LSGELVPGKVIRLEVNEDRI 853 +LL + GAR + + + LA +I L+ + +P K+I ++ +D I Sbjct: 816 ELLLSRCTEVDSGARNVDNILNSTVLPALATEILVALADQKLP-KLIMIDAKDDEI 870 >UniRef50_B5FD85 Type VI secretion ATPase, ClpV1 family n=2 Tax=Vibrio fischeri RepID=B5FD85_VIBFM Length = 860 Score = 507 bits (1305), Expect = e-142, Method: Compositional matrix adjust. Identities = 287/707 (40%), Positives = 438/707 (61%), Gaps = 22/707 (3%) Query: 134 ANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQV 193 A++ Q +E + + + Q + + + AL YT + T+ A+ K+DPV+ RD EIR+ I + Sbjct: 142 ASLKQQVEGLVSCANRDSQSSAEHQNALDAYTTNYTQLAKDNKIDPVLCRDSEIRQMIDI 201 Query: 194 LQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRG 253 L RR KNNP+++GE GVGKTA+VEGLA +I GEVP+ L+ +L+LD+G L AGA +G Sbjct: 202 LARRRKNNPMIVGEAGVGKTALVEGLAIKIAQGEVPDILENVALLSLDLGLLQAGASIKG 261 Query: 254 EFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGA 313 EFE RL V+ + + +ILFIDE HT++GAG G+ DA N+LKPALARGEL +GA Sbjct: 262 EFERRLNLVITAVQESPTPIILFIDEAHTLIGAGGQAGSNDAANLLKPALARGELRTIGA 321 Query: 314 TTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAA 373 TT EY++YIEKD AL RRFQ V V EP+V + ILRGL ERYE H V + D AI+AA Sbjct: 322 TTWSEYKKYIEKDPALARRFQPVKVDEPNVTQAVTILRGLAERYEESHGVYVRDDAIIAA 381 Query: 374 ATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKES 433 A LS RYI+ RQLPDKAIDL+D A + +++ + +KPE L+ L I + E ++++ Sbjct: 382 AELSARYISGRQLPDKAIDLLDTACARVKINLKAKPESLETLLHIIAITQRELDCVLRDQ 441 Query: 434 DEA---SKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQAR 490 + + L E+LS +LE+EW+ +K T + ++ Q E+ R Sbjct: 442 QAGINIEENTITQLKEKLSQTHLDAEQLEQEWQTQKELAEALLTSRIDIAQCNDEEEKHR 501 Query: 491 RVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSR 550 + + ++++ A T L+ + + +AEV++ WTGIP+S Sbjct: 502 LICN---------------QQEIHQALSDAQHTHSLVNYETCPSLVAEVVSHWTGIPMST 546 Query: 551 MMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVG 610 + + ++L ++ +L ++ GQ++AV A+ AI+ + AGL +PN P G FLF+GP+GVG Sbjct: 547 LQRGQATQVLTIKSKLKEQIKGQDQAVIALEKAIQATAAGLNNPNSPTGVFLFVGPSGVG 606 Query: 611 KTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRP 670 KT+ +A+A+ M+ ++ + I+MSEF EKH+VSRL+G+PPGYVGY EGG LTEAVR+RP Sbjct: 607 KTQTAQAIADLMYGGEQFLTTINMSEFQEKHTVSRLIGSPPGYVGYGEGGVLTEAVRQRP 666 Query: 671 YSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFG 730 YSV+LLDEVEKA ++ N+ Q+ D G DG+GR ++F+ T++IMTSNL SD I+ Sbjct: 667 YSVVLLDEVEKADREIMNLFYQIFDKGVANDGEGREINFKQTLIIMTSNLASDQIEALCN 726 Query: 731 ELDYAHMKELVLGV---VSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLE 787 + + L + ++ F+P + R+ VV F PL + + ++ I+LK+L ++L Sbjct: 727 QEEKPTTDALTKAIRPTLNQYFKPALVGRMT-VVPFFPLDMESMEALVDIRLKQLTEQLS 785 Query: 788 ERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQIL 834 + +H + ++ ++++ GAR + I Q++ + QIL Sbjct: 786 LQQITLHYDEAIIQHIAQSCTLTETGARNIDAIINGQLKPAFSSQIL 832 >UniRef50_A9FKV2 Endopeptidase Clp n=6 Tax=Proteobacteria RepID=A9FKV2_SORC5 Length = 901 Score = 504 bits (1297), Expect = e-141, Method: Compositional matrix adjust. Identities = 290/680 (42%), Positives = 418/680 (61%), Gaps = 39/680 (5%) Query: 159 QALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEG 218 AL K+ +D T +A G++DP+ GR+ EIR+ I +L RR KNNP+++G+ GVGKTA+VEG Sbjct: 191 SALAKFCVDYTGKARAGQIDPIFGREREIRQVIDILARRRKNNPIIVGDAGVGKTALVEG 250 Query: 219 LAQRII-----NGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNV 273 LA I+ N +VP L+G +L LDMG L AGA +GEFE R+K V+ ++ + Sbjct: 251 LALLIVESTPENPKVPPLLQGVDILGLDMGLLQAGAGVKGEFENRMKQVIAEVKGSSKPI 310 Query: 274 ILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRF 333 ILFIDE HT++GAG G DA N+LKPALARGEL + ATT EY++Y EKDAALERRF Sbjct: 311 ILFIDEAHTLIGAGGQQGGGDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALERRF 370 Query: 334 QKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDL 393 Q V V EPS + +LRGL+ ++E+ H+V I D A+ AA LS RY+ RQLPDKA+DL Sbjct: 371 QPVKVDEPSEPAAVVMLRGLRPKFEVAHNVIIQDEAVTAAVRLSARYLTGRQLPDKAVDL 430 Query: 394 IDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEA---SKKRLDMLNEELSD 450 +D A+ +++ + +P ++ + I+ + E +AL ++ D ++R+ L + L+ Sbjct: 431 LDTCAARVKVALQQRPSAVEDAEILIVNTETELKALERDRDRGVHIDEERVSALKDRLA- 489 Query: 451 KERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELE 510 + +ELE A +GTQ + AR+ D A+ SE + E+ Sbjct: 490 --KAKTELETVRAAYAKETAGTQRVI-----------DARKKMDEAKTSEERDAARREVV 536 Query: 511 KQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRV 570 K L+ Q +G+ + L+R V +A +A V+A WTGIPV +M++ + + LL ME L R+ Sbjct: 537 KALDELKQSQGE-VPLVRPDVDEAMVASVVAAWTGIPVGKMVQDDVKALLEMEDRLTRRI 595 Query: 571 IGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMV 630 GQ + +S +R +RAGL + P G FL +GP+GVGKTE +A+ MF + M Sbjct: 596 KGQTHGIVTISKELRSARAGLKPLSTPQGVFLLVGPSGVGKTETALGIADLMFGGERMMT 655 Query: 631 RIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNIL 690 I+MSEF EKH+VSRL+G+PPGYVGY EGG LTEAVR+RPY+V+LLDEVEKA PDV N+ Sbjct: 656 VINMSEFQEKHTVSRLIGSPPGYVGYGEGGMLTEAVRQRPYTVVLLDEVEKADPDVMNLF 715 Query: 691 LQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQ-----------ERFGELDYAHMKE 739 QV D G L+DG+GR VDF+NTV+I+TSNL +D I R + D +KE Sbjct: 716 YQVFDKGMLSDGEGRLVDFKNTVIILTSNLATDKITNMTVAAREEDPSRRLDADGEFIKE 775 Query: 740 LVLGV---VSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRL-EERGYEIHI 795 +V + +S +F+P + R+ V + P+ + I +++L L RL + + E Sbjct: 776 IVESIKPTLSAHFKPALLARM-TTVPYLPISPDALGEITRLKLDALVDRLRKSQRIEASY 834 Query: 796 SDEALKLLSENGYDPVYGAR 815 SD ++ ++ + GAR Sbjct: 835 SDALVETIAARCTEVDTGAR 854 >UniRef50_C5ZYU5 ATP-dependent Clp protease subunit n=2 Tax=Proteobacteria RepID=C5ZYU5_9HELI Length = 876 Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust. Identities = 316/877 (36%), Positives = 500/877 (57%), Gaps = 65/877 (7%) Query: 13 ALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQALNRLP 72 AL A L N ++E H ++ L+ +E S ++ ++ ++ D+ L++LP Sbjct: 20 ALESATILCKNRGNSYVELAHWINQLMLEENTDCSYIVDFFELDKNKITKDLISYLDKLP 79 Query: 73 Q----VEGTGGDVQ----PSQDLVRVLNLCDK-------LAQKRGDNFISS------ELF 111 + +E D++ + + ++ DK LA K+ N IS E Sbjct: 80 KGSSSIEDFSNDIELAIKEAWMISSIVFDFDKIRSGSLLLALKQNSNLISKLHDMSHEFI 139 Query: 112 VLAALESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTER 171 + A + +I K + + + + ++N+ L YTIDLT++ Sbjct: 140 KINADVLQDKFKEITKGSVEVNESYSNVSNATKSDPNLNNN------DVLSLYTIDLTQK 193 Query: 172 AEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEG 231 A++GK+D ++GRD+EIR+ I +L RR +NNP+L GE GVGKTAI EGLA R+ EVP Sbjct: 194 AKEGKIDEIVGRDKEIRQAIDILIRRRQNNPILTGEAGVGKTAIAEGLAVRLAKNEVPSI 253 Query: 232 LKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADG 291 LKG + +LD+G L AGA +GEFEERLK V+ + +ILFIDE HT++GAG G Sbjct: 254 LKGYVLRSLDIGLLQAGASMKGEFEERLKKVIEAVQNSSTPIILFIDEAHTLIGAGGTAG 313 Query: 292 AMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILR 351 DA N+LKPALARGEL C+ ATT EY +Y EKD AL RRFQ + V EP E I ++R Sbjct: 314 QNDAANLLKPALARGELRCLAATTWQEYIKYFEKDPALSRRFQNISVEEPDDEKCIQMMR 373 Query: 352 GLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEE 411 + + E HHV IT+ AI+A+ LS RY+ R+LPDK+ ++D A++ + + S PE Sbjct: 374 SIAKSLEKFHHVTITNEAIIASVKLSRRYLPSRKLPDKSTSILDTASARVALSQSSMPES 433 Query: 412 LDRLDRRIIQLKLEQQALMKESDEA--SKKRLDMLNEELSDKERQYSELEEEWKAEKASL 469 L+ L ++I +LE++ L++E E + L +++ EL E++ LE ++ EK ++ Sbjct: 434 LEILIKKIESKQLEKEILLREEREGIDHSESLKLIDMELVKLEQEKQSLEAKFDKEKEAI 493 Query: 470 SGTQTIKAEL--EQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLL 527 + ++ +L EQ + +E+ + + +R GKI Q++G+ +L Sbjct: 494 QEYKELRTKLLNEQDENELEKFKEKLNDSR------GKI----------AQIQGENPMIL 537 Query: 528 RNKVTDAE-IAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRR 586 V DA+ IA +++ WTGIP+ RM++ E + +L +E+EL +IGQN ++ ++ +I Sbjct: 538 --PVVDAQAIAAIISEWTGIPLGRMIKDEAKSILALEEELAKNIIGQNHSLSLIAKSIIT 595 Query: 587 SRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRL 646 ++A LADP +P F+ GP+GVGKTE ++A ++ S + ++ I+MSEF E H+VS L Sbjct: 596 AKANLADPQKPQAIFMLAGPSGVGKTETALSIAQMVYGSRDNIITINMSEFQEAHTVSTL 655 Query: 647 VGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRT 706 GAPPGYVGY EGG LTEAVR++PYSVILLDE+EKAH D+ I QV D GR+ DG GR Sbjct: 656 KGAPPGYVGYGEGGVLTEAVRKKPYSVILLDEIEKAHHDIHEIFFQVFDKGRMEDGAGRL 715 Query: 707 VDFRNTVVIMTSNLGSDLIQERFGELDYAH---MKELVLGVVSHNFRPEFINRIDEVVVF 763 VDFRNT++I+T+N+G I + + +Y ++ + V+ F + R+ VV + Sbjct: 716 VDFRNTIIILTTNVGDSEIFDLCEDGNYPKPEILERAIRPVMQKVFPAALLGRL-VVVPY 774 Query: 764 HPLGEQHIASIAQIQLKRLYKRLEER-----GYEIHISDEALKLLSENGYDPVYGARPLK 818 +PL ++ + I ++L+++ +R++E Y++ + DE + + + GAR + Sbjct: 775 YPLNKEALHKIIDLKLQKIIQRIQEYYKAEFAYDVSLKDEIMTRCN----NIASGARMID 830 Query: 819 RAIQQQIENPLAQQILSGELVPGKV--IRLEVNEDRI 853 I +I ++ + L L K+ + LEV I Sbjct: 831 AIINNEILPNISIKFLQNNLETKKISKVFLEVKNGEI 867 >UniRef50_D1TDQ5 Type VI secretion ATPase n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TDQ5_9BURK Length = 910 Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust. Identities = 298/706 (42%), Positives = 427/706 (60%), Gaps = 24/706 (3%) Query: 137 TQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQR 196 T A+ + GG G ++ AL+ YT+D+T A +GK+DP+ GRD EIR+ I VL R Sbjct: 189 TGAMPNIAGG-----AGGSGRKSALELYTVDMTGLAREGKIDPIRGRDAEIRQLIDVLLR 243 Query: 197 RTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFE 256 R +NNP+L GE GVGKTA+VEG AQRI+ G+VP L V +LD+ L AGA +GEFE Sbjct: 244 RRQNNPILTGEAGVGKTAVVEGFAQRIVQGDVPPALVNVSVRSLDLALLQAGAGVKGEFE 303 Query: 257 ERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTL 316 RLK V+ ++ VILFIDE H ++GAG ++G DA N+LKPALARGEL + ATT Sbjct: 304 NRLKSVIAEVKASPVPVILFIDEAHQLIGAGGSEGQGDAANLLKPALARGELRTIAATTW 363 Query: 317 DEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATL 376 EY++Y+E+D AL RRFQ V V EPS I +LRG+ ++ E HH V+I D A+ A L Sbjct: 364 AEYKKYVERDPALARRFQVVKVEEPSEAVAIDMLRGMVQKLEEHHGVEILDDAVRDAVKL 423 Query: 377 SHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRI----IQLKLEQQALMKE 432 SHRYI+ RQLPDKAI ++D A + + + PEE++ L R I QL++ + Sbjct: 424 SHRYISGRQLPDKAISVLDTACARVAIGQSGTPEEIEALGRTIEAAERQLRILRHEAATG 483 Query: 433 SDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRV 492 +D A + + ++L D Q S L ++ EK ++ + I A ++ + + Sbjct: 484 ADRADA--IAVTTKQLDDARAQRSRLTDKLATEKRAV---EEILAWRKKIRGYLSDPDSA 538 Query: 493 GDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMM 552 D + L + LEK LEA E ++ V +A+V++ WTGIPV RM+ Sbjct: 539 ADGEDAASLAV-NLSRLEKGLEAMQNDE----PMVPVCVDSETVAQVISGWTGIPVGRML 593 Query: 553 ESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKT 612 E +L ++ +L RV+GQ+EA+DA++ +R RA L DP +P+G FL +GP+GVGKT Sbjct: 594 ADELHTVLYLQDKLAERVVGQDEALDAIARRVRTFRADLDDPGKPVGVFLLVGPSGVGKT 653 Query: 613 ELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYS 672 E ALA+ ++ + M+ ++MSEF E HSVS L GAPPGYVGY GG LTEAVRRRPYS Sbjct: 654 ETACALADMLYGGERNMITVNMSEFQEAHSVSGLKGAPPGYVGYGRGGVLTEAVRRRPYS 713 Query: 673 VILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE--RFG 730 V+LLDE+EKAHPDV + QV D G + DG+G +DF+NT++++TSN D+I E R G Sbjct: 714 VVLLDEMEKAHPDVLELFFQVFDKGVMEDGEGVPIDFKNTLILLTSNAAQDVITEASRGG 773 Query: 731 ELDYA-HMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEER 789 + E + + F P F+ R+ V +H LG+ I +I ++L+RL +R E Sbjct: 774 RRPPPDELIEKLRPALLRQFSPAFLGRLVLVPYYH-LGDAQINAIVNLKLERLAQRFERN 832 Query: 790 GYE-IHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQIL 834 + + D+ L+++ + GAR + + Q + LA+Q+L Sbjct: 833 HHAGLTWDDDVATLIAQRCKEVDSGARNVDHILTQSVLPELARQVL 878 >UniRef50_A9BLL0 Type VI secretion ATPase, ClpV1 family n=46 Tax=Bacteria RepID=A9BLL0_DELAS Length = 928 Score = 498 bits (1282), Expect = e-139, Method: Compositional matrix adjust. Identities = 302/708 (42%), Positives = 425/708 (60%), Gaps = 21/708 (2%) Query: 146 GESVNDQGAED-QRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204 GE+ GA Q AL++YT+DLT RA+ G+LDPV GRD+E+R+ + +L RR +NNP+L Sbjct: 190 GEASQATGAAPGQGGALQQYTVDLTARAKAGELDPVTGRDDEVRQMVDILLRRRQNNPIL 249 Query: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264 +GE GVGKTA+VEGLA RI G+VP L+G + LD+G L AGA +GEFE RL+G+L+ Sbjct: 250 VGEAGVGKTAVVEGLALRIAQGDVPPPLQGVELRVLDVGLLQAGASMKGEFENRLRGLLD 309 Query: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324 + ++LFIDE+HT+VGAG G DA N+LKPALARG L +GATT EY++YIE Sbjct: 310 AVQSSTTPIVLFIDEVHTLVGAGGQAGTGDAANLLKPALARGTLRTIGATTWAEYKKYIE 369 Query: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384 KD AL RRFQ V V EP + +LRG+ + E HH V+I A+ AA +LSHRYI R Sbjct: 370 KDPALTRRFQLVQVHEPDEPRAVDMLRGVAAKLENHHQVRIAADAVAAAVSLSHRYIPSR 429 Query: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKES--DEASKKRLD 442 QLPDKA+ L+D A S + M + + P +L+ + RRI L +EQ+ L++E+ + +RL Sbjct: 430 QLPDKAVSLLDTACSRVAMALHATPAQLEAVQRRIEALGVEQEVLLREAALGLPTAERLQ 489 Query: 443 MLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLA------ 496 L +L+ + + L E + E A +A L K + D + Sbjct: 490 ALETDLASLRERQATLAERFGQESALARRILETEAALMGLKPPVFSTGAATDPSAAAPET 549 Query: 497 -----RMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRM 551 + + LE +L+G LL+ V +A V+A WTGIPV RM Sbjct: 550 AAEATATEPAEPPSVATLEALRRQLAELQGDA-PLLQPVVDAGVVAAVVAEWTGIPVGRM 608 Query: 552 MESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGK 611 + E + +L + L RVIGQ ++A++ I+ SRA L DP +PIG FL GP+GVGK Sbjct: 609 VRDEVQSVLSLADTLEKRVIGQRHGLEAITRRIQTSRARLDDPGKPIGVFLLAGPSGVGK 668 Query: 612 TELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPY 671 TE +LA ++ ++ ++ I+MSEF E H+VS L GAPPGYVGY EGG LTEAVRRRPY Sbjct: 669 TETALSLAEALYGGEQNLITINMSEFQEAHTVSTLKGAPPGYVGYGEGGVLTEAVRRRPY 728 Query: 672 SVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGE 731 SV+LLDE+EKAH DV + QV D G + DG+GR +DF+NTV+I+TSN+GSDLI + Sbjct: 729 SVVLLDEIEKAHSDVHEMFFQVFDKGWMEDGEGRYIDFKNTVIILTSNVGSDLIANMCRD 788 Query: 732 LDYAHMKELVLGVVS----HNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLE 787 D A E + V F + R+ VV ++P+ + + I ++Q+ R+ +R+E Sbjct: 789 PDLAPTPEGLAQAVRQPLLQTFPAALLGRL-TVVPYYPISDAMLEQIIRLQMLRIQRRIE 847 Query: 788 ER-GYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQIL 834 ER G + + A+ L+ + GAR + + Q + +A L Sbjct: 848 ERHGAQFSFDEAAVDLVRRRCSEVESGARMVDGILTQNLLPRMATHFL 895 >UniRef50_Q6GDQ0 ATP-dependent Clp protease ATP-binding subunit clpL n=194 Tax=cellular organisms RepID=CLPL_STAAR Length = 701 Score = 496 bits (1277), Expect = e-138, Method: Compositional matrix adjust. Identities = 279/688 (40%), Positives = 410/688 (59%), Gaps = 83/688 (12%) Query: 167 DLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIING 226 +LT+ A G LDPVIGRD+EI+ T +VL RRTKNNP+L+GE GVGKTAIVEGLAQ I+ G Sbjct: 87 NLTQEARDGLLDPVIGRDKEIQETAEVLSRRTKNNPILVGEAGVGKTAIVEGLAQAIVEG 146 Query: 227 EVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGA 286 VP +K + ++++D+ +L AG +YRG FEE ++ ++ + K N +LF DE+H ++G+ Sbjct: 147 NVPAAIKDKEIISIDISSLEAGTQYRGAFEENIQKLVEGV-KSSQNAVLFFDEIHQIIGS 205 Query: 287 GKA---DGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSV 343 G G+ ++LKPAL+RGE+ +GATT DEYR I KDAAL RRF +V V EPS Sbjct: 206 GATGSDSGSKGLSDILKPALSRGEISIIGATTQDEYRNNIMKDAALTRRFNEVLVNEPSA 265 Query: 344 EDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRM 403 +DT+ IL+G++E++E HH V++ D + A LS +YI R LPDKAID+ Sbjct: 266 KDTVEILKGIREKFETHHQVKLPDDVLKACVDLSIQYIPQRLLPDKAIDV---------- 315 Query: 404 QIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWK 463 LD L + A+ K + E++ SELE + Sbjct: 316 -----------LDITAAHLSAQSPAIDKVT-----------------TEKRISELEHD-- 345 Query: 464 AEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKT 523 ++ ++ E+ ++ D+ + +I L+ +LE + G+ Sbjct: 346 ----------------KRKAVSAEEYKKADDIQK-------EIKSLQDKLENSN---GEH 379 Query: 524 MRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNA 583 + T +I++ + R TGIPVS+M ++ E+L + L ++IGQ++AV+ VS A Sbjct: 380 TAV----ATVHDISDTIQRLTGIPVSQMDANDIERLKNISSRLRSKIIGQDKAVEMVSRA 435 Query: 584 IRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSV 643 IRR+RAG D NRPIGSFLF+GPTGVGKTEL K LA +F + EA++R+DMSE+ + +V Sbjct: 436 IRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLAIDLFGNKEALIRLDMSEYSDTTAV 495 Query: 644 SRLVGAPPGYVGYEEG-GYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702 S+++G GYVGY++ LTE VRR PYSVIL DE+EKA+P + +LLQV+DDG LTDG Sbjct: 496 SKMIGTTAGYVGYDDNSNTLTEKVRRNPYSVILFDEIEKANPQILTLLLQVMDDGNLTDG 555 Query: 703 QGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 762 QG ++F+NT++I TSN G FG + K+ ++ + FRPEF+NR + +V Sbjct: 556 QGNVINFKNTIIICTSNAG-------FGNGNDTEEKD-IMHEMKKFFRPEFLNRFNGIVE 607 Query: 763 FHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQ 822 F L + + I + L + L+++G + +S +A L E GYD GARPL+R ++ Sbjct: 608 FLHLDKDALQDIVNLLLDDVQVTLDKKGITMDVSQDAKDWLIEEGYDEELGARPLRRIVE 667 Query: 823 QQIENPLAQQILSGELVPGKVIRLEVNE 850 QQ+ + + L V I +E NE Sbjct: 668 QQVRDKITDYYLDHTDVKHVDIDVEDNE 695 >UniRef50_D2TPV1 T6SS protein Cts2V n=1 Tax=Citrobacter rodentium ICC168 RepID=D2TPV1_CITRO Length = 835 Score = 494 bits (1273), Expect = e-138, Method: Compositional matrix adjust. Identities = 322/809 (39%), Positives = 462/809 (57%), Gaps = 40/809 (4%) Query: 10 FQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQALN 69 + L A +S A GH F+EP HL+ ALL+ E ++ L AGI LR +I +A + Sbjct: 16 YALEQAAGRSRAQGH--WFVEPEHLLLALLDDEHCDLACCLDGAGIPVDALRDEIRRAQS 73 Query: 70 RLPQVEGTGGDVQP--SQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILK 127 + TG P S LV +L L R + S L +L L A + + Sbjct: 74 QFR----TGCTRMPVFSAQLVELLEGALLLTTFRQLKQVRSALLLLTLLTRDRLRAQLAQ 129 Query: 128 AAGATTANITQAIE-----QMRG-GESVNDQGAEDQR----QALKKYTIDLTERAEQGKL 177 + +E RG E+V+D+ D L +YT DLT A QG++ Sbjct: 130 GLPLLLKISAEQLEDHWLNWCRGSAEAVSDRSDADAAVRGDSVLDQYTHDLTREARQGRI 189 Query: 178 DPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRV 237 DP+IGRD EIR+ I +L RR +NNP+L+G PGVGKTA+ EGLA RI G VP L+ + Sbjct: 190 DPIIGRDAEIRQCIDILLRRRQNNPILVGAPGVGKTAVAEGLALRIAEGSVPPPLRDVAL 249 Query: 238 LALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGN 297 L+LD+G L AGA +GEFE+RLKGV+ + K ++LFIDE HT++GAG A+G DA N Sbjct: 250 LSLDLGLLQAGAGVKGEFEQRLKGVIEAVKKSSQPIVLFIDEAHTLIGAGGAEGGSDAAN 309 Query: 298 MLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERY 357 +LKPALARGEL + ATT EY++Y EKD AL+RRFQ++ + EP + + +LR + ++ Sbjct: 310 LLKPALARGELRTIAATTWQEYKKYFEKDPALDRRFQRIHIEEPDEDSAVMMLRAVADKL 369 Query: 358 ELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDR 417 E HH VQI D AI A LS RYI+ RQLPDKAI ++D A S + + P L+ + + Sbjct: 370 EAHHGVQILDTAIREAVRLSQRYISGRQLPDKAISVLDTACSRVALAQHDIPPALEEVRQ 429 Query: 418 RIIQLKLEQQALMKE--SDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTI 475 ++ ++ E L +E RL L + + Q E+EE W+ E+ + Sbjct: 430 QLATIEEESVRLNRELLVGIDHHDRLCDLEAQAKLLQLQAQEVEERWQDERQRVG----- 484 Query: 476 KAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLE-AATQLEGKTMRLLRNKVTDA 534 EL A+ + D E + + L +LE AA QL + + L+ + V A Sbjct: 485 --ELLAARQRMLALNARLDDEEELEQELVECAALIGKLETAAVQLRDE-VPLVPDCVDAA 541 Query: 535 EIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADP 594 +A V+ WTGIP+ +M+ E L + + + RV+GQ A++ ++ +R R+GL DP Sbjct: 542 TVAAVIGGWTGIPIGQMLTDEAHALRTLVERMSERVMGQRAALETIARRLRAYRSGLTDP 601 Query: 595 NRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYV 654 +P+G FL +GPTGVGKTE ALA+ ++ + ++ I++SE+ E H+VS+L GAPPGYV Sbjct: 602 QKPVGVFLLVGPTGVGKTETAYALADALYGGERNLITINLSEYQEAHTVSQLKGAPPGYV 661 Query: 655 GYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVV 714 GY GG LTEAVRRRPYSV+LLDE+EKAHPDV V D G + DG G VDF+NTV+ Sbjct: 662 GYGSGGALTEAVRRRPYSVVLLDEIEKAHPDVLEAFYNVFDKGVMEDGTGLIVDFKNTVM 721 Query: 715 IMTSNLGSDLI-----QERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQ 769 + TSN+G++LI E E M+E +L +FRP F+ R+ V + L E+ Sbjct: 722 LATSNVGAELILETPTSEFNSEWFNTAMREELL----RHFRPAFLARM-TTVAYRALDEE 776 Query: 770 HIASIAQIQLKRLYKR-LEERGYEIHISD 797 + I +L++L +R L G ++++ D Sbjct: 777 TLKGIVLAKLEKLAQRYLVATGEKLNMED 805 >UniRef50_B7LFQ0 Putative uncharacterized protein n=1 Tax=Escherichia coli 55989 RepID=B7LFQ0_ECO55 Length = 849 Score = 489 bits (1258), Expect = e-136, Method: Compositional matrix adjust. Identities = 273/703 (38%), Positives = 416/703 (59%), Gaps = 39/703 (5%) Query: 159 QALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEG 218 + L KYT +L+ RAE GKLDPV GR++E+R+ I +L RR +NNP+L GEPGVGK++IVEG Sbjct: 169 EYLSKYTENLSLRAETGKLDPVTGREKEVRQLIDILLRRRQNNPILTGEPGVGKSSIVEG 228 Query: 219 LAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFID 278 LA +I +G VP+ LK R+ ALDMGAL+AGA RGEFE RLK +L +L +G ILFID Sbjct: 229 LALQIASGRVPDVLKNVRIHALDMGALLAGASVRGEFENRLKSLLTELNSLDGTAILFID 288 Query: 279 ELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFV 338 E H+++GAG G DA N+LKPALARGEL + ATT EY++Y EKD AL RRFQ V V Sbjct: 289 EAHSLIGAGGLPGQTDAANLLKPALARGELRIIAATTWGEYKKYFEKDGALARRFQIVKV 348 Query: 339 AEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAA 398 AEP+ + T +LR L E HH+V I + AI A LS RY+ R+ PDK++ L+D A Sbjct: 349 AEPNQDVTAEMLRSLLPMMEKHHNVSIREEAITATVHLSDRYLHGRRQPDKSVSLLDTAC 408 Query: 399 SSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSEL 458 S + + + P+ + ++ +++ + E L +E + R +ML +++ E + +L Sbjct: 409 SRVAVSQSTSPDAIQDVEASLVRYQGELALLTQERSDV--LRQEMLANKIAQLEEELEQL 466 Query: 459 EEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQ 518 + W+ + ++ Q+ I+ + R K+LE+A + Sbjct: 467 KSAWRHQSELVAKIQS------SDDISSKNMYR-------------------KELESAYK 501 Query: 519 LEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVD 578 K ++ V +A+V++ WTG+P+ ++ E++K + + L RV+GQ A+ Sbjct: 502 ---KDSPMVFECVDKNCVADVVSGWTGVPLGVCLDGEQQKASGLLRCLEQRVLGQRYAMS 558 Query: 579 AVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFM 638 A+++ + RA L DP +P G FL GP+G GKTE +ALA F++ + ++ I+M+EF Sbjct: 559 AIASQVLICRADLKDPVKPDGVFLLAGPSGTGKTETARALAEFVYGDENKLITINMTEFQ 618 Query: 639 EKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGR 698 E H+VS L GAPPGYVG+ +GG LTE V PYSVILLDE+EKAHPDV Q+ D G Sbjct: 619 EAHTVSTLKGAPPGYVGFGQGGTLTERVSHNPYSVILLDEIEKAHPDVLEFFFQIFDSGI 678 Query: 699 LTDGQGRTVDFRNTVVIMTSNLGSDLIQERF--GELDYAHMKELVLGVVSHNFRPEFINR 756 + D +G+ V FR+ ++IMTSN S+ I + GE + +KE++L + + +F F+ R Sbjct: 679 IEDAEGKMVSFRDCLIIMTSNFASENITNIWNDGETNRDRIKEMLLPLFNEHFGAAFMGR 738 Query: 757 IDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERG---YEIHISDEALKLLSENGYDPVYG 813 + ++ F PL + + I I++ ++ +R E+ Y+I +D + ++ + G Sbjct: 739 TN-LIPFTPLHSKTLRDIVLIKIDKICQRFEQASGQMYKIEYNDSLIDWITHHCQCDKSG 797 Query: 814 ARPLKRAIQQQIENPLAQQILSGE--LVPGKVIRLEVNEDRIV 854 AR + + + LA+ + E P K IR+ V ++ I Sbjct: 798 ARDIDSVLNSTVLPVLARYLTDSEDNRTPKK-IRISVRKNNIT 839 >UniRef50_B9K2G7 ATP-dependent Clp protease ATP-binding subunit n=1 Tax=Agrobacterium vitis S4 RepID=B9K2G7_AGRVS Length = 903 Score = 487 bits (1254), Expect = e-136, Method: Compositional matrix adjust. Identities = 325/851 (38%), Positives = 487/851 (57%), Gaps = 33/851 (3%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 ++ L ++AL A S A G + ++ HL++A+++ S P+L G+ LR Sbjct: 10 IESLEPNLRVALETAASTAAGRGHGQVDIAHLLAAVMD--AASFQPVLEQLGLPIAALRR 67 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLV---RVLNLCDKLAQKRGDNFISSELFVLAALESR 119 +++ AL+ V G + SQ+++ R +C L R ++ + AA++ Sbjct: 68 EVSDALDD--TVVSGSGQLALSQNILTLGREAWICASLQSGRRAITLAD---IFAAMDDE 122 Query: 120 GTLADILKAAGATTANITQ-AIEQMRGGESVNDQGAEDQRQA-------LKKYTIDLTER 171 +L + + + + + A+E + + V + A L+ YT DLTE Sbjct: 123 PSLRALTRGRFPSLRMLDRTALETLLQTDVVAETPKSSLSPASVREDEFLRLYTHDLTED 182 Query: 172 AEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEG 231 A G+LDPV+GRD E+R+ I +L RR +NNP+L+GE GVGKTA+ E LA I G VPE Sbjct: 183 ARAGRLDPVVGRDGELRQMIDILLRRRQNNPILVGEAGVGKTAVAEALALEIAAGRVPEK 242 Query: 232 LKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADG 291 L+ R+L LD+ L AGA +GEFE RL GV+ + + +ILFIDE H ++GAG A G Sbjct: 243 LQSVRLLMLDLTLLQAGAGVKGEFERRLTGVIEAVKRSPEPIILFIDEAHGLIGAGGASG 302 Query: 292 AMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILR 351 DA N+LKPALARGE+ + ATT EY++Y EKDAAL RRFQ V V EP E I +LR Sbjct: 303 QGDAANILKPALARGEVRTIAATTWSEYKKYFEKDAALTRRFQPVHVREPDEETAIRMLR 362 Query: 352 GLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEE 411 G+ E + HH V+I D AIVAA LS R++ RQLPDKA+ LID AA+++ + + PE+ Sbjct: 363 GIAETFMAHHGVKIRDEAIVAAVQLSARFLPARQLPDKAVSLIDTAAATVSLARQTVPEQ 422 Query: 412 LDRLDRRIIQLKLEQQALMKESDEAS-KKRLDMLNEELSDKERQYSELEEEWKAEKASLS 470 L L + L +E L +E + ++R + E+ ++ L+ + AE A+L+ Sbjct: 423 LLLLKSELAHLTVETDWLAREPENTDVQERRQAVTTEMERLAKEIDSLQARYDAEIAALA 482 Query: 471 GTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNK 530 + A ++ K+A + A V ++ L+ + L + E K L+ ++ Sbjct: 483 ASDEAPA-VDSDKMASKDAPDVNVTPLITPLRTRGLVRRAASLAPTSAGEEK---LVPHE 538 Query: 531 VTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590 V +A VLARWTGIP+ +++ + E ++ L +VIGQ+ A++ + +A+R +RAG Sbjct: 539 VDRNVVAAVLARWTGIPLGKLLADQIESAKSLDMRLKEKVIGQDAALERIGDAMRAARAG 598 Query: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAP 650 L+DP RP F+ +G +G GKTE LA+ M+ + + I+MSEF E+H VS L+GAP Sbjct: 599 LSDPRRPPAVFMLVGMSGTGKTETALTLADLMYGGSQHLTTINMSEFKEEHKVSMLLGAP 658 Query: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFR 710 PGYVGY EGG LTEAVRRRPY V+LLDE++KAHP V +I QV D G L DG+GR VDFR Sbjct: 659 PGYVGYGEGGVLTEAVRRRPYGVLLLDEIDKAHPGVQDIFYQVFDKGMLRDGEGRDVDFR 718 Query: 711 NTVVIMTSNLGSDLIQERFGELDYAHMKE------LVLGVVSHNFRPEFINRIDEVVVFH 764 NT + MT+N GS+L+ LD M E L++ + F+P F+ R ++ F Sbjct: 719 NTTIFMTANTGSELLASL--ALDPDTMPEGEALEALLMPELQKQFKPAFLGRT-LLLPFM 775 Query: 765 PLGEQHIASIAQIQLKRLYKRL-EERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQ 823 PLG++ ++ I IQ+ R+ +R+ G E+ +S+EA L GAR ++ I + Sbjct: 776 PLGKEALSRIVDIQINRIRERIFSAYGTELALSEEARNALVGRAVASEIGARAIEIMIGR 835 Query: 824 QIENPLAQQIL 834 + PL+ L Sbjct: 836 DLLPPLSSFFL 846 >UniRef50_B6R3N5 Type VI secretion ATPase, ClpV1 family n=4 Tax=Proteobacteria RepID=B6R3N5_9RHOB Length = 901 Score = 487 bits (1254), Expect = e-136, Method: Compositional matrix adjust. Identities = 316/871 (36%), Positives = 487/871 (55%), Gaps = 64/871 (7%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 ++RL + A+ +A SL + + +Q + H + +L +Q L+ S ++ L Sbjct: 10 IERLNPCCRQAVEEAASLCVSNSHQEVTIEHFLISLASQPAVDFRLLIQSQNVDVDVLNE 69 Query: 63 DINQALNRLPQVEGTGGDVQPS-----QDLVRVLNLCDKLAQKRGDNFISSELFVLAALE 117 NR +VE D P+ QDL++ L + Q G + S ++A L Sbjct: 70 AFRATFNRYRRVEA---DRTPTFSPLLQDLLQDAWLIASVEQ--GKKTVRSGAVLIALLN 124 Query: 118 SRGTLAD-----ILKAAGATTANITQAIEQMRGGESVNDQ-----------GAEDQRQAL 161 RG +L+ + T + + +++ G D + L Sbjct: 125 DRGRYMQMDYYPLLERVSSDT--LLRQFDELTAGSFEKDHRAGQGAGGAASAGDTAEGFL 182 Query: 162 KKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQ 221 KY + T+ A+ GK+DP+ RD EIR+ I++L RR KNNP+ +GE GVGKTA+ EGLA Sbjct: 183 HKYGTNFTQLAKDGKIDPIFCRDNEIRQIIEILCRRRKNNPICVGEAGVGKTALAEGLAL 242 Query: 222 RIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELH 281 RI NGEVPE + LD+GAL AGA +GEFE+RLKGV++++ +ILFIDE H Sbjct: 243 RIANGEVPEDFANVALWGLDVGALQAGASMKGEFEKRLKGVIDEVRSSAEPIILFIDEAH 302 Query: 282 TMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEP 341 T++GAG G DA N+LKPALARGEL + ATT EY++Y EKD AL RRFQ V + EP Sbjct: 303 TLIGAGGDQGGSDAANLLKPALARGELKTIAATTWTEYKKYFEKDPALTRRFQLVKLDEP 362 Query: 342 SVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSI 401 ++++ I I+RGLK+ YE H V IT+ AI A+ L+ RYI RQLPDKAID++D A + + Sbjct: 363 TIDEAIIIMRGLKKAYEEAHGVYITEEAIGASVRLAARYITGRQLPDKAIDVLDTACARV 422 Query: 402 RMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEA-----SKKRLDMLNEELSDKERQYS 456 R ++ P EL +++ + L E++ L ++ A +RL + ++++D E + Sbjct: 423 RAGANTPPVELQDVEQSLQTLSWEREGLERDQLTAPLEPEQLERLKAIADQINDLEERKQ 482 Query: 457 ELEEEWKAEKASLSGTQTIKAEL------EQAKIAIEQARRVGDLARMSELQYGKIPELE 510 EL +A+ A + +L Q + A+EQ R + L K +E Sbjct: 483 ELSSRLEAQVALAENFIAAREDLFQKQPETQEEDALEQDRAL--------LVSHKNALIE 534 Query: 511 KQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRV 570 E + L+ +V AEIA +++ WTGIPV+ M++ + +LL + + + + Sbjct: 535 ---------EAGSEPLISVEVGSAEIAAIISDWTGIPVNSMVQDDYHRLLTLAETMKKAI 585 Query: 571 IGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMV 630 GQ+ A+DA+ +R SR L +P+G F GP+GVGKTE ++ +F +E + Sbjct: 586 KGQDHAIDAIEARLRASRLDLHKKGQPLGVFFLAGPSGVGKTETALEVSRRLFGGEEFIT 645 Query: 631 RIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNIL 690 I+MSE+ E+H+VSRL+G+PPGYVGY EGG LTEA+R++PYSV+LLDEVEKA P+V N+ Sbjct: 646 TINMSEYQERHTVSRLIGSPPGYVGYGEGGVLTEAIRKKPYSVVLLDEVEKADPNVLNLF 705 Query: 691 LQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD------YAHMKELVLGV 744 Q D G L DG+GR +D RN V +TSNLGSD I+ + + M + + + Sbjct: 706 YQAFDKGELADGEGRLIDCRNVVFFLTSNLGSDQIENWVANAEDDQVPSHGSMLKSLTPL 765 Query: 745 VSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEE-RGYEIHISDEALKLL 803 + +F+P + R+ E +V+ PL E+ +A I Q++L L + L+E + + I++ + Sbjct: 766 FAQHFKPALLARM-EPLVYMPLSEEVLADIVQMRLDDLIELLKETQKIALTITEATYGRV 824 Query: 804 SENGYDPVYGARPLKRAIQQQIENPLAQQIL 834 ++ GAR + + IQ+Q+ L+ +IL Sbjct: 825 TQMCRVASNGARLVDQVIQRQLLPTLSIEIL 855 >UniRef50_B8L5D3 Type VI secretion ATPase, ClpV1 family n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L5D3_9GAMM Length = 917 Score = 487 bits (1254), Expect = e-136, Method: Compositional matrix adjust. Identities = 320/843 (37%), Positives = 484/843 (57%), Gaps = 69/843 (8%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 + +L + + A A +L + N ++ HL ALL Q + +GI L Sbjct: 9 ISKLDDTCRQAAERAANLCMARGNYEVDLEHLFLALLEQPQSDFVLIARRSGILPESLER 68 Query: 63 DINQALNRLPQVEGTGGDVQP--SQDLVRVL-------NLCDKLAQKRGDNFISSELFV- 112 D+N +++ TG P SQ + ++ +L + + R + + + L Sbjct: 69 DLNDEISQFK----TGNSRTPVFSQHIPKLFEHAWLIASLDSETTRIRSGHLLLALLTEP 124 Query: 113 -LAALESRGTLA------DILKAAGAT-TANITQAIEQMR------GGESVNDQGAE--- 155 LA L RG+ D LK A T +A++ +R GE+ D+GA Sbjct: 125 DLAQLAYRGSKLFVRFKRDELKHDFAKLTEGSQEAVQTVRFADASAAGEAGEDEGAVPGE 184 Query: 156 -----DQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGV 210 + AL ++T +LT+RA GK+DPVIGRD EIR+ I +L RR +NNP+L GE GV Sbjct: 185 AKGGLSKTPALDQFTTNLTQRARDGKIDPVIGRDGEIRQVIDILMRRRQNNPILTGEAGV 244 Query: 211 GKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQE 270 GKTA+VEGLA+RI + +VP+ L+G + LDMG L AGA +GEFE RLK V++++ K Sbjct: 245 GKTAVVEGLARRIADKDVPDVLQGVELHTLDMGLLQAGASVKGEFENRLKNVIDEVKKSP 304 Query: 271 GNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALE 330 +ILFIDE HTM+GAG G DA N+LKPALARGEL + ATT EY++Y EKDAAL Sbjct: 305 HPIILFIDEAHTMIGAGGTAGQNDAANLLKPALARGELRTIAATTWGEYKKYFEKDAALA 364 Query: 331 RRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKA 390 RRFQ V V EPS A+LRG+ E H ++++ D A+ A LSHRYI+ RQLPDKA Sbjct: 365 RRFQVVKVEEPSEALAAAMLRGMVGLMEAHFNIRVLDEAVTEAVRLSHRYISGRQLPDKA 424 Query: 391 IDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK---RLDMLNEE 447 + ++D A + + + + P ++ + + +L+ E AL +E+ S + RL L+ + Sbjct: 425 VSVLDTACAKVALGQSATPAIIEDTRKHLDRLQAEISALQRETAGGSDQHGERLAELHAQ 484 Query: 448 LSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAK------------------IAIEQA 489 ++ + + EE E+ ++ ++EQ + +A A Sbjct: 485 QAEAQAVLTSNEERLGRERDLAGRIAVLRQQMEQGEAASGDPEPSNDDNEGDVAVAKPAA 544 Query: 490 RRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVS 549 +R A +S Q+ ++ L+ +L +L+G+T ++ +V +AE+++ WTG+P+ Sbjct: 545 KRGKAKAELSP-QHAELARLQAELR---ELQGET-PMVPLQVDGTVVAEIVSAWTGVPLG 599 Query: 550 RMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGV 609 RM++ E + + L RVIGQ+ A+DA++ +R + A L DPN+P G F+F+GP+GV Sbjct: 600 RMVKDEIRTVRTLGNLLVERVIGQDHALDAIAQRVRTATAKLEDPNKPRGVFMFVGPSGV 659 Query: 610 GKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRR 669 GKTE ALA+ ++ + +V I+MSE+ E HSVS L G+PPGYVGY EGG LTEAVRR Sbjct: 660 GKTETALALADILYGGERKLVTINMSEYQEAHSVSGLKGSPPGYVGYGEGGVLTEAVRRN 719 Query: 670 PYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERF 729 PYSV+LLDEVEKAHPDV + QV D G + D +GR +DFRNT++I+TSN+GS I + Sbjct: 720 PYSVVLLDEVEKAHPDVLEMFFQVFDKGMMDDAEGREIDFRNTLIILTSNIGSSQIMQAC 779 Query: 730 -----GELDYAH-MKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLY 783 E+ A + + + V+ F+P F+ R+ +VV ++P+ + +A I ++L R+ Sbjct: 780 LNKPAEEIPGAEALSDALRPVLMRTFKPAFLGRL-KVVPYYPINDDVLAQIITLKLGRIR 838 Query: 784 KRL 786 R+ Sbjct: 839 DRV 841 >UniRef50_Q7CUP5 ATP-dependent Clp protease, ATP-binding subunit n=5 Tax=Alphaproteobacteria RepID=Q7CUP5_AGRT5 Length = 892 Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust. Identities = 304/769 (39%), Positives = 449/769 (58%), Gaps = 45/769 (5%) Query: 91 LNLCDKL----AQKRGDNFISSELFVLAALESRGTLADILKAAGATTANITQAIEQMRGG 146 + LCD L + +F+ S L A++ RG L + L+++ A + G Sbjct: 110 VTLCDLLLAMDEETSLRSFVRSAFPSLKAMD-RGAL-ERLRSSAENGAGVDVPSALTSSG 167 Query: 147 ESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIG 206 E+ + Q A Q L+ YT D+T A GK+DPVIGRD+E+R+ + +L RR +NNP+L+G Sbjct: 168 EAGSAQAA-GQNDFLRLYTHDMTTDARNGKVDPVIGRDDELRQLVDILTRRRQNNPILVG 226 Query: 207 EPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDL 266 E GVGKTA+ E LA I +G VPE L+ +L LD+ L AGA +GEFE RL GV++ + Sbjct: 227 EAGVGKTAVAEALALEIASGNVPEKLRNVCLLNLDISLLQAGAGVKGEFERRLHGVIDAV 286 Query: 267 AKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKD 326 + VILFIDE H +VGAG A G DA N+LKPALARGE+ V ATT EY++Y EKD Sbjct: 287 KRSAEPVILFIDEAHGLVGAGGAAGQGDAANILKPALARGEVRTVAATTWSEYKKYFEKD 346 Query: 327 AALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQL 386 AAL RRFQ V V EP I +LRG+ + + HH+V + D AIVAA LS RY+ RQL Sbjct: 347 AALTRRFQPVHVREPDEATAIRMLRGVADTFVSHHNVTVRDEAIVAAVQLSARYMPARQL 406 Query: 387 PDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKES-DEASKKRLDMLN 445 PDKA+ L+D AA+++ + + PE L ++ L E L++E DE + R+ + Sbjct: 407 PDKAVSLLDTAAAAVSLARQTLPERLRAMESERHLLSDELNWLLREPQDEDMQNRIQSIR 466 Query: 446 EELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGK 505 +EL E +L + AE A L A ++ EQ G S + + Sbjct: 467 DELERLEAGIDDLRGRYDAEMAEL------------AALSEEQPAETG----ASNVSH-- 508 Query: 506 IPELEKQLEAATQLEGKTMRLLRNKVTDAE-IAEVLARWTGIPVSRMMESEREKLLRMEQ 564 L AT++ L V D E IA V++RWTGIP+ +++ + E ++ Sbjct: 509 -------LRPATEMRPANAERLVPTVVDREAIAAVVSRWTGIPLGKLLADQIESARTLDV 561 Query: 565 ELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFD 624 + RV+GQ+ A+ +++A+R +RAGL+DP RP F +G +G GKTE +LA+ ++ Sbjct: 562 RMRQRVVGQDAAITRIADAMRTARAGLSDPRRPPAVFFLVGMSGTGKTETALSLADLLYG 621 Query: 625 SDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHP 684 + + I+MSEF E+H VS L+G+PPGYVG+ EGG LTEAVRRRP+ V+LLDE++KAHP Sbjct: 622 GNSHLTTINMSEFKEEHKVSLLLGSPPGYVGFGEGGVLTEAVRRRPFGVLLLDEIDKAHP 681 Query: 685 DVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYA----HMKEL 740 V +I QV D G L DG+GR VDF+NT + MT+N GS+L+ + D ++ L Sbjct: 682 GVQDIFYQVFDKGVLRDGEGRDVDFKNTTIFMTANTGSELLSALSADPDTMPEGEALEAL 741 Query: 741 VLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEA 799 ++ ++ F+P F+ R ++ F PLG + +AS+ +Q+ ++ R L G ++ +SD A Sbjct: 742 LMPELTKQFKPAFLGRTI-ILPFMPLGAEELASVVDMQIGKIRDRVLATYGTDLRLSDAA 800 Query: 800 LKLLSENGYDPVYGARPLKRAIQQQIENPLA----QQILSGELVPGKVI 844 L GAR ++ I + + PL+ +++++GE V GK++ Sbjct: 801 RDALVARAGASEIGARAIEIMIGKDLLPPLSSFFLEKVIAGERV-GKIV 848 >UniRef50_B6EJ73 Chaperone ClpB n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6EJ73_ALISL Length = 872 Score = 484 bits (1247), Expect = e-135, Method: Compositional matrix adjust. Identities = 290/737 (39%), Positives = 450/737 (61%), Gaps = 36/737 (4%) Query: 135 NITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVL 194 ++ Q +E + + N + + AL YT + T+ A+ K+DPV+ RD EIR+ I +L Sbjct: 143 DLKQQVEGLINSVTENKTVNHEHQDALSAYTTNYTQLAKDNKIDPVLCRDSEIRQMIDIL 202 Query: 195 QRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGE 254 RR KNNP+++GE GVGKTA+VEGLA +I GEVP+ L+ +L+LD+G L AGA +GE Sbjct: 203 ARRRKNNPMIVGEAGVGKTALVEGLAIKIAQGEVPDILENVSLLSLDLGLLQAGASIKGE 262 Query: 255 FEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGAT 314 FE RL V+ + + +ILFIDE HT++GAG G+ DA N+LKPALARGEL +GAT Sbjct: 263 FERRLNLVIKAVQQSLTPIILFIDEAHTLIGAGGQAGSNDAANLLKPALARGELRTIGAT 322 Query: 315 TLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAA 374 T EY++YIEKD AL RRFQ + V EP+V I ILRGL ++YE H V + D AIVAAA Sbjct: 323 TWSEYKKYIEKDPALARRFQPIKVDEPTVSQAITILRGLADKYEESHGVYVRDDAIVAAA 382 Query: 375 TLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESD 434 LS RYI RQLPDKAIDL+D A + +++ + +KP+ L+ L I + E ++++ Sbjct: 383 ELSARYITGRQLPDKAIDLLDTACARVKINLKAKPQPLEALFHIIAITQRELNCVLRDKQ 442 Query: 435 ---EASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARR 491 +K + L +L + + + LE +W +K EL +A + Sbjct: 443 AGIHIDEKHIYDLENKLQETQSKAQHLEHDWLNQK-----------ELAEALLT------ 485 Query: 492 VGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKV------TDAEIAEVLARWTG 545 +R++ Q E E+ L + M+ N+V + +AEV++ WTG Sbjct: 486 ----SRINVAQCDDSQECEQLLSIQKETYHALMKAQSNQVLVSYETCPSLVAEVISHWTG 541 Query: 546 IPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLG 605 IP+S ++ + ++L + +L ++ GQ++A+ A+ AI+ + AGL +PN P G FLF+G Sbjct: 542 IPMSTLLRGQASQVLTLHTQLKQQIKGQDQAIIALQKAIQATAAGLNNPNAPTGVFLFVG 601 Query: 606 PTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEA 665 P+GVGKT+ A+A+ M+ ++ + I+MSEF EKH+VSRL+G+PPGYVGY EGG LTEA Sbjct: 602 PSGVGKTQTALAIADLMYGGEQFLTTINMSEFQEKHTVSRLIGSPPGYVGYGEGGVLTEA 661 Query: 666 VRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLI 725 VR+RPYSVILLDEVEKA +V N+ QV D G + DG+GR ++F+ T++IMTSNL S+ I Sbjct: 662 VRQRPYSVILLDEVEKADSEVMNLFYQVFDKGVVNDGEGREINFKQTLIIMTSNLASEHI 721 Query: 726 QERFGELDYAHMKEL---VLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRL 782 + + + ++ L + +++ F+P + R++ +V F+PL + + ++ I++++L Sbjct: 722 ESLCNQDELPSVESLTKAIRPILNQYFKPALVARMN-IVPFYPLDLESMEALVDIRMQQL 780 Query: 783 YKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQIL--SGELVP 840 ++L+++ ++ + ++++ GAR + I Q++ + QIL + P Sbjct: 781 SQQLQKQRIALYYDAHIISHIAKSCTLTETGARNIDAIINGQLKPAFSSQILLALAQKEP 840 Query: 841 GKVIRLEVNEDRIVAVQ 857 K I + ++ED V Q Sbjct: 841 LKAISVNIDEDGQVYCQ 857 >UniRef50_Q9F746 Chaperone protein clpB n=100 Tax=Proteobacteria RepID=CLPB_YEREN Length = 890 Score = 479 bits (1234), Expect = e-133, Method: Compositional matrix adjust. Identities = 311/864 (35%), Positives = 476/864 (55%), Gaps = 50/864 (5%) Query: 26 NQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQALNRLPQVEGTGGDVQPSQ 85 N ++E +H ++ L +QE + ++ ++ + QAL RLP + D Sbjct: 32 NPYVELIHWLNQLWHQEDNDLKHIVRYFAVDVDAFERGLAQALARLPVGATSISDFSYHI 91 Query: 86 DL-----------------VR----VLNLCDKLAQKRGDNFISSELFVLAALESRGTLAD 124 +L +R +L + + +R I+ E+ + Sbjct: 92 ELAIERAWVYASLECLDTRIRSGHLLLAMLTNMELRRALLAIAPEMEKIPLEHLSSDFNF 151 Query: 125 ILKAAGATTANITQAIEQMRG---GESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVI 181 I +A+ T T G GE+ N + L +YT DLT A +GK+DPV+ Sbjct: 152 ITQASPETNEAATDGSPMYDGTLPGEASNAINGKST-ATLAQYTTDLTALAREGKIDPVL 210 Query: 182 GRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALD 241 GR+ EI + +L RR +NNP+L GE GVGKTA+VEGLA I+ GE+P L +L LD Sbjct: 211 GRNHEISTMVDILLRRRQNNPLLTGEAGVGKTAVVEGLALAIVAGEMPPALSQVSLLTLD 270 Query: 242 MGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKP 301 + AL AGA +GEFE RLK VL++ VILFIDE+HT+VGAG G DA N+LKP Sbjct: 271 VVALSAGASMKGEFEARLKNVLDEAMASPTPVILFIDEVHTLVGAGGNAGTGDAANLLKP 330 Query: 302 ALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHH 361 ALARG+L +GATT E++++IEKD AL RRFQ + V EP + I++LRGL E HH Sbjct: 331 ALARGQLRTIGATTWSEFKRHIEKDPALTRRFQVLQVDEPDEDTAISMLRGLTPALEKHH 390 Query: 362 HVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQ 421 V I D A+ AA LSHRYI RQLPDKAI L+D A + + + S+P EL +L + Sbjct: 391 GVWIMDEALQAAVRLSHRYIPARQLPDKAISLLDTACARVAVAQFSQPAELQQLTFQSET 450 Query: 422 LKLEQQALMKESD--EASKKRLDMLNEELSDKERQYSELEEEWKAEK---ASLSGTQTIK 476 + E +L K + +R +L ++ ++LE+ W+AE+ +++ T+T+ Sbjct: 451 AQTELSSLEKAQHFGKGQDERTALLEATIAQHSAAANKLEQRWQAERELVTAITATRTVL 510 Query: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 536 EL E+ R+ + + +A L++ +V I Sbjct: 511 YELVSQPTPDEEKRQQYQQQLAQLEEQ------LLLIRSAQP-------LVQAEVNATVI 557 Query: 537 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNR 596 A ++A WTGI V +M++ + ++ + Q L RVIGQ A+ +S I +RAG+ADP + Sbjct: 558 ANIVADWTGIQVGQMLKDDIRAVMELPQRLEERVIGQPHALVQLSENIMTARAGMADPRK 617 Query: 597 PIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGY 656 P+G F+ +GP+GVGKTE A+A M+ ++ ++ I+MSE+ E H+VS L G+PPGYVGY Sbjct: 618 PLGVFMLVGPSGVGKTETALAIAESMYGGEQNLITINMSEYQESHTVSSLKGSPPGYVGY 677 Query: 657 EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 716 EGG LTEAVRR+PYSV+LLDE+EKAH DV + QV D G++ DG+GR +DF+NT++++ Sbjct: 678 GEGGVLTEAVRRKPYSVVLLDEIEKAHSDVHELFFQVFDKGQMEDGEGRFIDFKNTILLL 737 Query: 717 TSNLGSDLIQERFGELDYAHMKELVLGVVSHN----FRPEFINRIDEVVVFHPLGEQHIA 772 TSN+GS+L+ F + D A ++ +L + F F+ R+ V+ + PL + + Sbjct: 738 TSNVGSELLSNLFADPDTAPDQDGILSALQPELLKVFPAAFLGRVT-VIPYLPLQQSALQ 796 Query: 773 SIAQIQLKRLYKRLE-ERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQ 831 I ++ L R+ +RL+ + + SD + + GAR L R I+Q I + + Sbjct: 797 HIVRLHLDRIGQRLQSQHQLTLQYSDVVVDDVVSRCSVAETGARMLIRYIEQNITPEIGK 856 Query: 832 QIL-SGELVPGKVIRLEVNEDRIV 854 IL + +P +++ ++ E++ Sbjct: 857 FILRDHDAIPNQIVFVDKVENKFT 880 >UniRef50_A6VUK5 ATPase AAA-2 domain protein n=64 Tax=Gammaproteobacteria RepID=A6VUK5_MARMS Length = 873 Score = 479 bits (1234), Expect = e-133, Method: Compositional matrix adjust. Identities = 278/684 (40%), Positives = 417/684 (60%), Gaps = 23/684 (3%) Query: 160 ALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGL 219 AL K+ ++T +A+ +LDPV+ R++E+ + +L RR KNNP+++GE GVGK+A+VEGL Sbjct: 180 ALGKFCTNVTLQAKNDELDPVLCREDELNLMVDILCRRRKNNPIVVGEAGVGKSAVVEGL 239 Query: 220 AQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDE 279 A RI+ G VP+ L + +LD+G L AGA +GEFE+RLKG+++++ +ILFIDE Sbjct: 240 ALRIVAGNVPDKLANVEIHSLDLGLLQAGASIKGEFEKRLKGIIDEIKSSPVPIILFIDE 299 Query: 280 LHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVA 339 HT++G+G +G DA N+LKPALARGEL + ATT EY++Y EKD AL RRFQ V V Sbjct: 300 AHTLIGSGNQEGGSDAANLLKPALARGELSTIAATTWKEYKKYFEKDPALTRRFQLVKVE 359 Query: 340 EPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAAS 399 EPSV ++ I+RGL YE H V I D A+ A++ LS RY++ RQLPDKAID++D A + Sbjct: 360 EPSVSQSVDIMRGLHHVYEKAHGVLIHDDALKASSELSARYLSGRQLPDKAIDVLDTACA 419 Query: 400 SIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEEL-SDKERQYSEL 458 I + I + P+ L +LE Q ++ + KR ++ + + +D EL Sbjct: 420 RIAINISTPPKVLG---------QLENQCCTRQREIDMLKRQALIGQPVDNDYLESLIEL 470 Query: 459 EEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQ 518 E + + EK +L + + + E+ + I I Q+ +A L ++ EL +QL A+ Q Sbjct: 471 EVQAELEKETLLNSWSKQKEIIEKIIDIRQSILRNPVADDEALSDDELDELREQLAASYQ 530 Query: 519 -LE--GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNE 575 LE RL+ +V +IAEV++ WTG+P+ +M E K+ + + L+ ++ GQ+ Sbjct: 531 ELEQIPHHERLMYPEVNAQQIAEVISDWTGVPIDQMNSDELHKITHLPEILNAKIKGQDV 590 Query: 576 AVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMS 635 A++ V + SRA L P RP G+FL +GP+GVGKTE LA ++ + + I+MS Sbjct: 591 AIECVHRHLLTSRADLRRPGRPKGAFLLVGPSGVGKTETVIQLAEELYGGKQFLTTINMS 650 Query: 636 EFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLD 695 E+ EKH+VSRL+G+PPGYVG+ EGG LTEA+R++PYSV+LLDEVEKAHP+V N+ Q D Sbjct: 651 EYQEKHTVSRLIGSPPGYVGFGEGGVLTEAIRKKPYSVVLLDEVEKAHPEVLNLFYQAFD 710 Query: 696 DGRLTDGQGRTVDFRNTVVIMTSNLGSDLI---QERFGELDYAHMKELVLGVVSHNFRPE 752 G L DG+GR +D +N + +TSNLG I E E++ ELV F+P Sbjct: 711 KGELADGEGRLIDCQNILFFLTSNLGYQTIVDNVETPKEIEAKLYPELV-----PFFKPA 765 Query: 753 FINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEER-GYEIHISDEALKLLSENGYDPV 811 + R+ E+V + PL + + I +L L K L +R E+ I ++ + Sbjct: 766 LLARM-EIVPYLPLNKDVLEKIVLGKLSSLEKLLRKRYSAEVEIDPALVQEILNRATRSE 824 Query: 812 YGARPLKRAIQQQIENPLAQQILS 835 GAR L+ I+ Q+ P++ +L+ Sbjct: 825 NGARMLEAIIEGQVLPPISLALLN 848 >UniRef50_B3XE87 Type VI secretion ATPase, ClpV1 family n=1 Tax=Escherichia coli 101-1 RepID=B3XE87_ECOLX Length = 843 Score = 479 bits (1234), Expect = e-133, Method: Compositional matrix adjust. Identities = 283/796 (35%), Positives = 450/796 (56%), Gaps = 49/796 (6%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 + +LT + L A +LA+ + ++ +HL+ +++ + + L +N + Sbjct: 9 ISKLTPSAKKHLDMAINLAVSRRHYEVDIIHLIYVIISNDENLIEQLAKETLLNPPSIIN 68 Query: 63 DINQALNRLPQVEGTGGDVQP---SQDLVRVL--NLCDKLAQKRGDNFISSELFVLAALE 117 I + LPQ GDV S+ LV + + + + + LF Sbjct: 69 AIEKEFMELPQ-----GDVNTPVFSETLVSFIEKSWLHATTKWSCSSLDTPALFATVLYT 123 Query: 118 SRGTLADILKAAGATTANITQAI--EQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQG 175 R L + + + + + I + A L++YTI+L+ AE+G Sbjct: 124 ERELLPEHVSYSLNCQKKVAENILRQSCEASAITTQDNAFSSNSMLERYTINLSTSAEEG 183 Query: 176 KLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGR 235 ++DPVIGRD EIR+ I +L RR +NNP+L GEPGVGKT I+EGLA RI G+VPE L+ Sbjct: 184 RIDPVIGRDNEIRKLIDILLRRRQNNPILTGEPGVGKTCIIEGLALRIKEGKVPETLRNV 243 Query: 236 RVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDA 295 VL LD+ AL+AGA +GEFE RL+ +L ++ K+ ++LFIDE H +VGAG G DA Sbjct: 244 EVLTLDLTALLAGASAKGEFENRLQHILKEIEKKAKRIVLFIDEAHMLVGAGGLAGQTDA 303 Query: 296 GNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKE 355 N+LKPALARG L + ATT EY++Y EKDAAL RRFQ + V+EP V A+LR L Sbjct: 304 ANLLKPALARGTLRVIAATTWSEYKKYFEKDAALARRFQIIRVSEPDVNAASAMLRALVP 363 Query: 356 RYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRL 415 + HH+V IT+ AI AA LS+RYI+ R+LPDKA+ L+D A S + + P+E++ + Sbjct: 364 AFISHHNVDITEGAIKAATNLSNRYISGRKLPDKAVSLLDTACSHVSLSQTHIPKEIEYI 423 Query: 416 DRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTI 475 + I + E AL E+++ +K + LN+ ++ + L WK Sbjct: 424 EANIKRDMTELSAL--ENNDVLRK--NQLNKNINFFNDRLLLLNSIWK------------ 467 Query: 476 KAELEQAKIAIEQARRVGDLARMSELQ-YGKIPELEKQLEAATQLEGKTMRLLRNKVTDA 534 ++ + ++ E Q Y +I L +L+ + + ++ +V + Sbjct: 468 --------------HQLDLVNKIKECQDYDEIHALRMELKKSHR---DVAPMVFERVDET 510 Query: 535 EIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADP 594 IA+V++ WTGIP+ +E+E+EK + L R+IGQ+ A+ +S+ I +A L DP Sbjct: 511 CIADVVSEWTGIPLGTFLETEKEKSKALLSRLQQRIIGQDYALSVISSQIEICQANLHDP 570 Query: 595 NRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYV 654 ++P G +LF GP+G+GKTE ALA ++ ++ I+MSEF E HS+S L GAPPGYV Sbjct: 571 HKPTGIYLFAGPSGIGKTETAHALAELVYGGSNNLITINMSEFQEAHSLSGLKGAPPGYV 630 Query: 655 GYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVV 714 G+ GG LTE V+R P+ VILLDE+EKAHPDV + QV D G + DG+G+ ++FRNT++ Sbjct: 631 GFGHGGILTEGVKRNPFCVILLDEIEKAHPDVIELFYQVFDKGTMEDGEGQLINFRNTLI 690 Query: 715 IMTSNLGSDLIQERF--GELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIA 772 IMTSNL + + + + G+ +++ ++ + F+ F+ R++ ++ F PL + + Sbjct: 691 IMTSNLAASQLNDLWISGDKSISNILSVIRPIYDDFFQSAFMGRVN-LIPFLPLSQDSLK 749 Query: 773 SIAQIQLKRLYKRLEE 788 I +++++++ +R+ + Sbjct: 750 RITKMKIEKICQRVSD 765 >UniRef50_Q88IA4 Chaperone-associated ATPase, putative n=14 Tax=Gammaproteobacteria RepID=Q88IA4_PSEPK Length = 878 Score = 476 bits (1224), Expect = e-132, Method: Compositional matrix adjust. Identities = 290/690 (42%), Positives = 420/690 (60%), Gaps = 36/690 (5%) Query: 154 AEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKT 213 A + AL +YT++LT+ A +G++DPV+GR+ E+R+ + +L RR +NNP+L GE GVGKT Sbjct: 189 ASGKTPALDQYTVNLTQSAREGRIDPVLGREFEVRQMVDILTRRRQNNPILTGEAGVGKT 248 Query: 214 AIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNV 273 A+VEGLA RI G+VP LK + LD+G L AGA +GEFE RLK V+ ++ + + Sbjct: 249 AVVEGLALRIAQGDVPAVLKDVALHTLDLGLLQAGAGVKGEFENRLKAVIEEVKRSLHPI 308 Query: 274 ILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRF 333 ILFIDE HT++G+G G DA N+LKPALARGEL + ATT EY++Y EKDAAL RRF Sbjct: 309 ILFIDEAHTLIGSGGQAGQNDAANLLKPALARGELRTIAATTWAEYKKYFEKDAALARRF 368 Query: 334 QKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDL 393 Q V V EP + I +LRGL + HH V + D A+V A LS+RYI RQLPDKA+ + Sbjct: 369 QVVKVEEPDEDKAIHMLRGLLGKMREHHKVAVMDEALVQAVRLSNRYITGRQLPDKAVSV 428 Query: 394 IDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEA--SKKRLDMLNEELSDK 451 +D A + I + S P L+ R+I L+ E L E+ + +RL+ L L + Sbjct: 429 LDTACARIALAQSSLPGALEDCRRQIDNLQAEIDVLGHEAGKGHDHARRLESLQAALQAE 488 Query: 452 ERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRV-GDLARMSELQYGKIPELE 510 ++Q +L +W+ E L + +KA +Q + +LAR+ G P Sbjct: 489 QQQEQQLNAQWQQE---LELVEQLKALDAANDADAQQLNTLRAELARVQ----GDQP--- 538 Query: 511 KQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRV 570 L+ V IA+V++ WTGIP+ +M+ E + + R+ L RV Sbjct: 539 ---------------LVHALVDSGAIAQVISGWTGIPLGKMLRDEIDTVQRLPALLGERV 583 Query: 571 IGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMV 630 +GQ+ A+ + I+ SRA + DPN+PIG FL LGP+GVGKTE ALA+ ++ + ++ Sbjct: 584 LGQDHALHEIGKRIKISRARMEDPNKPIGVFLLLGPSGVGKTETALALADTLYGGERNLI 643 Query: 631 RIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNIL 690 I+MSE+ E H+VS L G+PPGYVGY EGG LTEAVRR+PYSV+LLDEVEKAHPDV + Sbjct: 644 TINMSEYQEAHTVSSLKGSPPGYVGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVLELF 703 Query: 691 LQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVL----GVVS 746 QV D G L DG+GR ++FRNTV+I+TSN G++ I + E ++ ++ Sbjct: 704 FQVFDKGVLDDGEGREINFRNTVIILTSNTGTERIMQTCLNATELPTPEAIVEDLRDQLN 763 Query: 747 HNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHIS-DEAL-KLLS 804 H F+P F+ R+ +V F+P+ +Q + I ++L+R+ KR R ++ +S D+AL K ++ Sbjct: 764 HVFKPAFLGRLS-IVPFYPVQDQILERIVALKLERIAKRF-ARNHQAELSYDQALVKAIA 821 Query: 805 ENGYDPVYGARPLKRAIQQQIENPLAQQIL 834 + GAR + + Q + LAQ++L Sbjct: 822 ARCTEVDSGARNIDNILSQTLMPELAQRVL 851 >UniRef50_C5ALE8 ATPases with chaperone activity, ATP-binding subunit n=3 Tax=Burkholderia RepID=C5ALE8_BURGB Length = 933 Score = 475 bits (1222), Expect = e-132, Method: Compositional matrix adjust. Identities = 290/733 (39%), Positives = 430/733 (58%), Gaps = 38/733 (5%) Query: 146 GESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLI 205 GE+ + A + +L+++ DLT RA +G++DPV+GRD EIR + VL RR +NNP+L Sbjct: 175 GEASDAMAAPARGSSLEQFCADLTARALKGEIDPVVGRDIEIRTMVDVLLRRRQNNPLLT 234 Query: 206 GEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLND 265 G+ GVGKTA+VEGLA I G+VP L R+L LD+GAL+AGA RGEFE RLK V+ Sbjct: 235 GDAGVGKTAVVEGLALAIARGDVPPKLAEVRLLNLDVGALLAGASMRGEFEARLKSVIEA 294 Query: 266 LAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEK 325 K VILFIDE+HT++GAG G DA N+LKPALARG L +GATT EY+++IEK Sbjct: 295 AGKAPVPVILFIDEIHTLIGAGGQAGTGDAANLLKPALARGTLRVIGATTWAEYKRHIEK 354 Query: 326 DAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQ 385 D AL RRFQ + VAEP + ++RGL + HH V + D A+ A+ LSHRY+ RQ Sbjct: 355 DPALTRRFQVLQVAEPEPGAAVDMVRGLVGTFSRHHGVVVLDEAVRASVMLSHRYLPSRQ 414 Query: 386 LPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKE-----SDEASKKR 440 LPDKAI L+D A + + + + P EL L +++ ++E L E D AS Sbjct: 415 LPDKAISLLDTACARVALSQHAPPRELQYLRQQLEAARIESALLDAERRVGIGDGASWSE 474 Query: 441 LDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELE-------------------- 480 + + +++ E Q ++E+ W+A+ ++ +AE E Sbjct: 475 V---AQRIAELEVQARDIEQAWQAQVEAVRALLEARAETEGEDERGGEPDGGAGQPCLPA 531 Query: 481 QAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVL 540 + A + + ++ L++QL QL+G L+ +V++A +A ++ Sbjct: 532 DPDTGPAERAVAPAAAHVDTAAFERLHLLDRQLR---QLQGGR-PLVFPEVSEAMVAAII 587 Query: 541 ARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGS 600 + WTGIPV RM+ E + R+ + L RV+GQ +A+ ++ I+ +RAGLADP +P+G Sbjct: 588 SDWTGIPVGRMVTDEIAAVRRLSETLSARVVGQTDALRQIAERIQTARAGLADPAKPLGV 647 Query: 601 FLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG 660 FL GP+GVGKTE ALA ++ ++ ++ I+MSE+ E H+VS L GAPPGYVGY EGG Sbjct: 648 FLLTGPSGVGKTETALALAEALYGGEQNLITINMSEYQEAHTVSSLKGAPPGYVGYGEGG 707 Query: 661 YLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL 720 LTEAVRRRPYSV+LLDE+EK+H DV + QV D G + DG GR +DFRNT +++TSN+ Sbjct: 708 VLTEAVRRRPYSVVLLDEIEKSHSDVKEMFFQVFDKGYMEDGDGRYIDFRNTTILLTSNV 767 Query: 721 GSDLIQERFGELDYAHMKE---LVLG-VVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQ 776 G++L+ + A + + LG V+ F F+ R+ VV F PL + + IA+ Sbjct: 768 GAELLTSLCADEALAPESDALRMALGPVLLKAFPAAFLGRV-TVVPFRPLAQGSLVQIAR 826 Query: 777 IQLKRLYKRL-EERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILS 835 + L R+ +R+ + G E+ + + GAR + I+Q + L++ L Sbjct: 827 LYLDRVARRMADHHGVELVYAPAVADYVVARCLVQETGARLMIGFIEQHLLPALSRHWLD 886 Query: 836 GELVPGKVIRLEV 848 + ++ R+E+ Sbjct: 887 ALISNRRLARIEI 899 >UniRef50_B5FRR8 Chaperone protein clpB n=19 Tax=Gammaproteobacteria RepID=B5FRR8_SALDC Length = 911 Score = 474 bits (1220), Expect = e-132, Method: Compositional matrix adjust. Identities = 279/669 (41%), Positives = 400/669 (59%), Gaps = 25/669 (3%) Query: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220 L +Y ++T+ A QG+LDPV+ RD EI I +L RR KNNPV++GE GVGK+A++EGLA Sbjct: 180 LARYAKNMTDDARQGRLDPVLCRDNEIDLMIDILCRRRKNNPVVVGEAGVGKSALIEGLA 239 Query: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280 RII G+VP+ L+ ++ LD+GAL AGA +GEFE+R KG++ ++ + VILFIDE Sbjct: 240 LRIIAGQVPDKLRDTDIMTLDLGALQAGASVKGEFEKRFKGLMAEVIQSPKPVILFIDEA 299 Query: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340 HT++GAG G +D N+LKPALARGEL + ATT EY++Y EKD+AL RRFQ V V+E Sbjct: 300 HTLIGAGNQQGGLDISNLLKPALARGELKTIAATTWSEYKKYFEKDSALSRRFQLVKVSE 359 Query: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400 P+ + ILRGL YE H V I D A+ AAATLS RY++ RQLPDKAID++D A + Sbjct: 360 PNAAEATIILRGLSAVYEQSHGVLIDDEALQAAATLSERYLSGRQLPDKAIDVLDTACAR 419 Query: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSE--- 457 + + + S P ++ L Q + E + L +E + LNE L+ + SE Sbjct: 420 VAINLSSPPRQISALTTLRQQCEAEIRQLEREIRIGLRSDTSRLNEVLAQYDETLSELDA 479 Query: 458 LEEEWKAEKASLSGTQTIKAELEQAKIAI---EQARRVGDLARMSELQYGKIPELEKQLE 514 LE W+ ++ + ++ L A E A + + PE E ++ Sbjct: 480 LEAAWRQQQTLVQEIIALRKGLLDETDATGNDETATPETEAVGSDDESVTAPPEAEPEIS 539 Query: 515 AATQLE---------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQE 565 A +L T L+ V +IA V+ WTG+P++R+ ++E + + Q Sbjct: 540 PAARLAQLTAELDALHHTQLLVSPHVDKKQIASVITEWTGVPLNRLSQNEMSVITDLPQW 599 Query: 566 LHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDS 625 L + GQ A+ + + +RA L P RP+G+FL GP+GVGKTE LA ++ Sbjct: 600 LGDTIKGQALAIKHLHKHLLTARADLRRPGRPLGAFLLAGPSGVGKTETVLQLAELLYGG 659 Query: 626 DEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPD 685 + + I+MSEF EKH+VSRL+G+PPGYVGY EGG LTEA+R++PYSV+LLDEVEKAHPD Sbjct: 660 RQYLTTINMSEFQEKHTVSRLIGSPPGYVGYGEGGVLTEAIRQKPYSVVLLDEVEKAHPD 719 Query: 686 VFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVV 745 V N+ Q D G + DG+GR +D +N V +TSNLG +I E + M+E + V+ Sbjct: 720 VLNLFYQAFDKGEMADGEGRLIDCKNVVFFLTSNLGYQVIVEHADNPE--AMQEALYPVL 777 Query: 746 SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEER-GYEI----HISDEAL 800 + F+P + R+ EVV + PL + +A I +L RL L R G E+ ++DE + Sbjct: 778 ADFFKPALLARM-EVVPYLPLSRETLAVIIAGKLARLDNVLRARFGAEVVIEPEVTDEIM 836 Query: 801 KLLS--ENG 807 + ++ ENG Sbjct: 837 QRVTRAENG 845 >UniRef50_Q7N4N8 Similar to ClpA/B-type chaperone n=3 Tax=Enterobacteriaceae RepID=Q7N4N8_PHOLL Length = 860 Score = 472 bits (1215), Expect = e-131, Method: Compositional matrix adjust. Identities = 301/847 (35%), Positives = 474/847 (55%), Gaps = 67/847 (7%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 + +LT + + L +A +LA+ + +E HL+ AL ++ ++ + GI++ L Sbjct: 9 VSKLTVEARQCLDEAVNLAVRRTHHEVEIEHLLLALFEKQLPTMEQVCHHGGIDSMTLLN 68 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQ-------KRGDNFISSELFVLAA 115 ++L L G+ +P V NL + + Q G + I++++ ++A Sbjct: 69 ACQRSLALL-----RSGNHRPP---VLATNLTEWMEQTWMYASTHWGASQITAQVLIVAL 120 Query: 116 LESRGTLADILKAAGATTANITQAIE-QMRGGESVNDQG-----AEDQRQALKKYTIDLT 169 + + + T IE +R + Q ++ + AL +YT LT Sbjct: 121 IMNPSLHHSLTSELQQALQGNTDGIEPWLRTQTNTTPQHITAPVGDNTQSALAQYTHHLT 180 Query: 170 ERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVP 229 + A KLDPV+GR+ EIR+ I VL RR +NNP+L GE GVGKTA++EGLAQRI++G VP Sbjct: 181 QAARDNKLDPVLGREREIRQLIDVLLRRRQNNPLLTGEAGVGKTALIEGLAQRIVDGRVP 240 Query: 230 EGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKA 289 + L + LDMG L AGA +GEFE RL+ +L+++ K VILFIDE HT++GAG Sbjct: 241 KVLAQAELFTLDMGLLQAGASVKGEFESRLQKLLDEVKKYPTPVILFIDEAHTLIGAGGQ 300 Query: 290 DGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAI 349 G DA N+LKPALARGEL + ATT EY++Y EKDAAL RRFQ + V EPS+E IA+ Sbjct: 301 AGQNDAANLLKPALARGELRAIAATTWSEYKKYFEKDAALARRFQLIKVEEPSLELAIAM 360 Query: 350 LRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKP 409 LR + E HH+V++ A+ A TL++RYI RQLPDK++ L+D A + + + +P Sbjct: 361 LRAITPAMEKHHNVKVLAEAVTEAVTLANRYITGRQLPDKSVSLLDSACARVAVSQTDEP 420 Query: 410 EELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASL 469 ++ L + + EQ+AL++E + +L L + + + +E+ E+ A++ Sbjct: 421 APIEDLRAMLANIAAEQEALLREG--GHETQLQKLAQRQAKLQASLAEILPEYHAQR--- 475 Query: 470 SGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRN 529 + V D+ E ++P L +L + Sbjct: 476 --------------------QLVNDILACDE-HDERLPVLRAELHQRHHQHAYVF----D 510 Query: 530 KVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA 589 V A +A+++A WTGIP+ RM+E+ER+ L ++E L RV+GQ+ A+ ++ IR ++ Sbjct: 511 CVDAACVADIVAGWTGIPLGRMVENERDVLRQLETRLGQRVMGQDHALSQIARQIRIAKV 570 Query: 590 GLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGA 649 LADP +P G F+ GP+GVGKTE ALA+ ++ + ++ I+MSE+ E HSVS L G+ Sbjct: 571 QLADPIKPTGVFMLAGPSGVGKTETALALAHELYGGEHHLITINMSEYQEAHSVSGLKGS 630 Query: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709 PPGYVGY +GG LTEAVRR+PYSV+LLDEVEKAHPDV + QV D G + D +G+ ++F Sbjct: 631 PPGYVGYGQGGVLTEAVRRQPYSVVLLDEVEKAHPDVLELFFQVFDKGMMEDAEGQQINF 690 Query: 710 RNTVVIMTSNLGSDLI------------QERFGELDYAHMKELVLGVVSHNFRPEFINRI 757 RNT++I+T+N SDL+ + R L+ ++E++ + F P F+ R+ Sbjct: 691 RNTLIILTTNAASDLVMRAAMHGVKEQGENRPATLE--DIQEIIRPELQRIFTPAFLGRL 748 Query: 758 DEVVVFHPLGEQHIASIAQIQLKRLYKRLEERG-YEIHISDEALKLLSENGYDPVYGARP 816 +V+ + P+ + + +I +L ++ R + E+H SD + +++ GAR Sbjct: 749 -QVIPYLPVQGEVLHAIVHHKLNKIVTRYRQSTQCELHYSDTLVDFIAKGCQIAESGARE 807 Query: 817 LKRAIQQ 823 + + Q Sbjct: 808 IDNLLTQ 814 >UniRef50_C4GNT2 ClpB protein n=23 Tax=Yersinia RepID=C4GNT2_YERPN Length = 867 Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust. Identities = 293/809 (36%), Positives = 450/809 (55%), Gaps = 54/809 (6%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +RL +A L + ++++E H + L++Q+ G + LLT G++ + T Sbjct: 13 FNRLGTFAYKTFVEATRLCRSYRHEYVELEHWLKILMDQQRGDIPALLTHYGLSQTVIST 72 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGD-NFISSELFVLAALESRGT 121 +++ + +P + + D+ S L V+ L+Q + I + +LA L+ Sbjct: 73 QLDRIIQHMPVTKASVQDL--SSRLESVVEGGLVLSQLMASPSPIRTSHILLALLQDTQH 130 Query: 122 ------LADILKA----------AGATTANITQAIEQMRGGESVNDQGAEDQRQA---LK 162 L D K G +I Q E RG V + + ++A L Sbjct: 131 QRWLYRLCDEFKKLPVPQVAEEYEGLLVNSIEQTSEVQRGDALVTETDSSSSKEAHAALN 190 Query: 163 KYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQR 222 K+ DLT++A G++DPVIGR+ E+R+ I +L RR +NNP+L+GE GVGKTA+VE LA++ Sbjct: 191 KWCNDLTQQARDGEIDPVIGREAELRQVIDILLRRRQNNPILVGEAGVGKTAVVEALARK 250 Query: 223 IINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHT 282 + +G+VP L+G R+L+LD+G + AGA RGEFE RLK +++ +++ + VILF DE HT Sbjct: 251 LASGDVPPLLQGARLLSLDLGRMQAGASMRGEFESRLKSLIDGISQSDTPVILFCDEAHT 310 Query: 283 MVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPS 342 +VGAG G DA N+LKP LARG L + ATT EY+Q+IE DAAL RRFQ+V + EP+ Sbjct: 311 LVGAGGQAGTGDAVNLLKPMLARGALRMIAATTWSEYKQFIEPDAALTRRFQRVLIGEPN 370 Query: 343 VEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIR 402 + +LR + + HH+V I D AI AA LS R + RQLPDKAI L+D A + + Sbjct: 371 ESTAVDMLRAIAPHFAQHHNVTIRDGAIHAAVRLSLRNLPSRQLPDKAISLLDTACARVA 430 Query: 403 MQIDSKPEELDRLDRRIIQLKLEQQALMKESD--EASKKRLDMLNEELSDKERQYSELEE 460 + ++P+ +++L ++ LK E Q L++E EA +RLD + ++ E + + L+ Sbjct: 431 LSQYAQPQAIEQLSAQLDVLKTEHQYLVREKQLGEAVDQRLDDVQTQIQAFEHELTALQS 490 Query: 461 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 520 E+ + + + E E + + E A R G+L + E P +++Q Sbjct: 491 RHLHEQQLV---REVLPEGEGSGMMTENA-RWGELMALQEASPLVYPWVDEQ-------- 538 Query: 521 GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAV 580 IA VL+ WTGIP +M++ + E +L +EQ L + GQ A+ + Sbjct: 539 --------------SIAAVLSDWTGIPSGKMLQDDIECVLNLEQRLGDHIFGQRNAIKEI 584 Query: 581 SNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEK 640 S AIR +RAG+ RP+G FL G TG GKTE L ++ ++ +MSEF E Sbjct: 585 SQAIRIARAGIQSQERPLGIFLLAGSTGTGKTETANVLVETLYGGAHNLITFNMSEFQEA 644 Query: 641 HSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLT 700 H++S L GAPPGYVGY +GG LTEAVRR+PYSVILLDE +KAH D+ + QV D G + Sbjct: 645 HTLSTLKGAPPGYVGYGKGGKLTEAVRRKPYSVILLDEFDKAHADIQDAFYQVFDKGWME 704 Query: 701 DGQGRTVDFRNTVVIMTSNLGSDLIQERF---GELDYAHMKELVLGVVSHNFRPEFINRI 757 D +GR V FR +++T N G++ I++ + ++ +K LV + F P + R+ Sbjct: 705 DAEGRRVSFRQCFILLTCNQGAEEIEQAYLTANDIKPGALKPLVYDALLRRFAPALLARV 764 Query: 758 DEVVVFHPLGEQHIASIAQIQLKRLYKRL 786 + ++ + PL + +A IA L RL RL Sbjct: 765 N-IIPYIPLDQDALAQIASHHLARLQTRL 792 >UniRef50_Q6TKU1 Aec27 n=39 Tax=cellular organisms RepID=Q6TKU1_ECOLX Length = 919 Score = 464 bits (1193), Expect = e-129, Method: Compositional matrix adjust. Identities = 284/697 (40%), Positives = 408/697 (58%), Gaps = 56/697 (8%) Query: 145 GGESVNDQGAEDQRQA------LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRT 198 ESV+ G + R L +Y ++T A G+LDPV+ R+ EI I +L RR Sbjct: 156 SAESVDLAGGQTPRATETGDTLLARYAKNMTADARNGRLDPVLCRNYEIDLMIDILCRRR 215 Query: 199 KNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEER 258 KNNPV++GE GVGK+A++EGLA RI+ G+VP+ LK ++ LD+GAL AGA +GEFE+R Sbjct: 216 KNNPVVVGEAGVGKSALIEGLALRIVAGQVPDKLKNTDIMTLDLGALQAGASVKGEFEKR 275 Query: 259 LKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDE 318 KG++ ++ VILFIDE HT++GAG G +D N+LKPALARGEL + ATT E Sbjct: 276 FKGLMAEVIFSPVPVILFIDEAHTLIGAGNQQGGLDISNLLKPALARGELKTIAATTWSE 335 Query: 319 YRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSH 378 Y++Y EKDAAL RRFQ V V+EP+ + ILRGL YE H V I D A+ AAATLS Sbjct: 336 YKKYFEKDAALSRRFQLVKVSEPNAAEATIILRGLSAVYEQSHGVLIDDDALQAAATLSE 395 Query: 379 RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRL-------DRRIIQLKLEQQALMK 431 RY++ RQLPDKAID++D A + + + + S P+++ L + I QL+ E + ++ Sbjct: 396 RYLSGRQLPDKAIDVLDTACARVAINLSSPPKQISALTTLSHQQEAEIRQLERELRIGLR 455 Query: 432 ESDEASKKRLDMLNEELSDKERQYSELEEEWKAEK--------------------ASLSG 471 + L+ +E LS ELE W+ + ASL Sbjct: 456 TDTSRMTEVLEQYDETLS----ALDELEVAWQQQTLVQEIIALRQQLLGVAEDDVASLPD 511 Query: 472 TQTIK---AELEQAKIAIEQARRVGDLA------RMSELQYGKIPELEKQLEAATQLEGK 522 ++ E EQ E A G + +S +Q ++ +L +L+A L Sbjct: 512 ADAVEDTPPEAEQDSTDAESADDAGSVQPEETAETVSPVQ--RLAQLTAELDA---LHND 566 Query: 523 TMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSN 582 + L+ V +IA V+A WTG+P++R+ ++E + + L + GQ+ A+ ++ Sbjct: 567 QL-LVSPHVDKKQIAAVIAEWTGVPLNRLSQNEMSVITDLPVWLGGTIKGQDLAIASLHK 625 Query: 583 AIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHS 642 + +RA L P RP+G+FL GP+GVGKTE LA ++ + + I+MSEF EKH+ Sbjct: 626 HLLTARADLRRPGRPLGAFLLAGPSGVGKTETVLQLAELLYGGRQYLTTINMSEFQEKHT 685 Query: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702 VSRL+G+PPGYVGY EGG LTEA+R++PYSV+LLDEVEKAHPDV N+ Q D G + DG Sbjct: 686 VSRLIGSPPGYVGYGEGGVLTEAIRQKPYSVVLLDEVEKAHPDVLNLFYQAFDKGEMADG 745 Query: 703 QGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 762 +GR +D +N V +TSNLG +I E D M+E + V++ F+P + R+ EVV Sbjct: 746 EGRLIDCKNIVFFLTSNLGYQVIVEHAD--DPETMQEALYPVLADFFKPALLARM-EVVP 802 Query: 763 FHPLGEQHIASIAQIQLKRLYKRLEER-GYEIHISDE 798 + PL ++ +A+I +L RL L R G ++ I E Sbjct: 803 YLPLSKETLATIIAGKLARLDNVLRSRFGADVIIGPE 839 >UniRef50_Q3JGS2 ATP-dependent Clp protease ATP-binding subunit n=35 Tax=pseudomallei group RepID=Q3JGS2_BURP1 Length = 956 Score = 461 bits (1185), Expect = e-128, Method: Compositional matrix adjust. Identities = 305/875 (34%), Positives = 463/875 (52%), Gaps = 73/875 (8%) Query: 13 ALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT---------- 62 AL DA +L + FI+ H LL +E ++ L G +AG+ + Sbjct: 17 ALVDATALGRSRRHAFIDLDHWALCLLQREQSDLARLFELFGSDAGEAKRRMEKALDGFD 76 Query: 63 -------DINQALNR-------LPQVEGTGGDVQPSQDLVRVLN--LCDKLAQKRGDNFI 106 DI+ +L R Q+ G V+ L+ L+ L + Q+R + I Sbjct: 77 VSGDSLRDISSSLERSVGPAVIWSQIAARAGKVRSGHLLLAWLDEDLTRRWLQQRVPSGI 136 Query: 107 SSELFVLAALESRGTLADILKAAGATTANITQAIE------QMRGGESVNDQGAEDQRQA 160 +S L D++K A A +A E G + GA+ A Sbjct: 137 TSV-----------ALDDVVKRYEALAAGWPEADEAPAALDGAALGAQAGEAGADGTGDA 185 Query: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220 L K+ +TE+A +G+LDPV+GRD+E+R I +L RR +NNP+L+GE GVGKTA+VE LA Sbjct: 186 LAKWATCVTEQAARGELDPVVGRDDELRTVIDILSRRRQNNPILVGEAGVGKTAVVEALA 245 Query: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280 Q+I G VP GL G +V ALD+ + AGA RGEFE+RLK +++ + +ILF DE Sbjct: 246 QKIHAGAVPPGLVGAQVWALDLARMQAGAGVRGEFEQRLKSLIDAVIASPAPIILFCDET 305 Query: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340 HT++GAG A G DA N++KP LARG+L V ATT EY+QYIE DAAL RRFQ V V E Sbjct: 306 HTLIGAGGAAGTGDAANLIKPMLARGQLRMVAATTWSEYKQYIEPDAALVRRFQAVAVDE 365 Query: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400 PS + + +LR + R+ HH V+I D A+ A LS RY+ RQLPDKAI L+D A + Sbjct: 366 PSDDAAVDMLRTIAPRFAAHHGVRIVDSALRGAVELSRRYLPARQLPDKAISLLDTACAR 425 Query: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 460 + M P EL+RL + + Q + SD R EL ++ ++ Sbjct: 426 VAMSQSCAPAELERLQHQAFAIG--QTLDWRASDRRMGVRTPGDEAELEGRQASLAQ--- 480 Query: 461 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 520 + A+L + A+ ++ + LAR+++ P+ AA Sbjct: 481 ----QAATLE--TVVDAQRDEVRAW---------LARLND----ATPQAADGDGAAFAAR 521 Query: 521 GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAV 580 R +R V + ++EVLA WTG+PV+++ + + ++++ +E L+ + GQ A+ ++ Sbjct: 522 IGANRWVRPWVDEHVVSEVLAEWTGVPVAQLAQDDAQRVVELEAALNAGIHGQTGAMRSI 581 Query: 581 SNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEK 640 + A++ S +GL DP RP+G L GPTG GK++ LA +F + +++ +M+EF E Sbjct: 582 AQALQVSHSGLNDPRRPLGVMLLAGPTGTGKSQAAAKLAELLFGGERNLLQFNMNEFQEA 641 Query: 641 HSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLT 700 H+VS L GAPPGYVGY +GG LTEAVR++PYSV+LLDE ++AHPD+ + QV D G + Sbjct: 642 HTVSTLKGAPPGYVGYGKGGRLTEAVRKKPYSVLLLDEFDRAHPDIHEVFYQVFDQGWME 701 Query: 701 DGQGRTVDFRNTVVIMTSNLGSDLIQERFG---ELDYAHMKELVLGVVSHNFRPEFINRI 757 DG+GR + FRN ++++TSNLG I+ + A + +LV + F P + RI Sbjct: 702 DGEGRRISFRNCLILLTSNLGEAEIEAACKADPRISQAKLDKLVGERLQGRFSPALLARI 761 Query: 758 DEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPL 817 ++V F L + IA L L +RL + + + ++ R + Sbjct: 762 -QLVAFRTLDVDALTGIATQALDELGERLAQNDLQWRADEGVASWIAHAVSQHPANGRAV 820 Query: 818 KRAIQQQIENPLAQQILS--GELVPGKVIRLEVNE 850 + ++Q + +A+ +L+ E K +RL NE Sbjct: 821 RDLLRQHVMPAVARGVLAARAEGRALKTVRLAANE 855 >UniRef50_Q8KA87 Probable chaperone protein clpB 2 n=15 Tax=cellular organisms RepID=CLPB2_CHLTE Length = 442 Score = 461 bits (1185), Expect = e-128, Method: Compositional matrix adjust. Identities = 236/430 (54%), Positives = 312/430 (72%), Gaps = 1/430 (0%) Query: 4 DRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTD 63 ++ T K Q AL A LA NQ IEP HL+S +L + L + Sbjct: 6 NKFTVKAQEALQAASMLASSKQNQQIEPEHLLSVMLGDHDNIACQIARKLETPVDTLLSV 65 Query: 64 INQALNRLPQVEGTGGDVQP-SQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTL 122 +++ ++R+P+V G Q S DL +V + K A++ D +ISSE +A E+ + Sbjct: 66 VDREIDRIPKVTGASATGQYISSDLGKVFDTALKEAEQLKDEYISSEHLFIAMSEAGVKV 125 Query: 123 ADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIG 182 + +LK AG I + + RG + V Q AE+ Q+LKKY+ +L + +GKLDPVIG Sbjct: 126 SKLLKDAGIDRNAILKVLTSFRGSQRVTSQNAEESYQSLKKYSRNLNDLVIKGKLDPVIG 185 Query: 183 RDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDM 242 RD+EIRR +Q+L RRTKNNPVLIGEPGVGKTAIVEG+AQRI+ G+VPE LK +++ ALD+ Sbjct: 186 RDDEIRRVLQILSRRTKNNPVLIGEPGVGKTAIVEGIAQRIVGGDVPENLKSKQIAALDI 245 Query: 243 GALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPA 302 ALVAG K+RGEFEERLK ++ ++ +G VILFIDELH +VGAG A+G+MDA N+LKPA Sbjct: 246 AALVAGTKFRGEFEERLKALVKEVQASDGEVILFIDELHLLVGAGSAEGSMDAANILKPA 305 Query: 303 LARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHH 362 LARGEL C+GATTLDEYR++IEKDAALERRFQ V V +PSVEDT++ILRGLKE+YE+HH Sbjct: 306 LARGELRCIGATTLDEYRKHIEKDAALERRFQTVIVDQPSVEDTVSILRGLKEKYEIHHG 365 Query: 363 VQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQL 422 V+I D A+VAAA LS+RYIADR LPDKAIDLIDEA S +R++IDS+PEELDR++R + +L Sbjct: 366 VRIKDAALVAAAELSNRYIADRFLPDKAIDLIDEACSRLRLEIDSEPEELDRINRELRRL 425 Query: 423 KLEQQALMKE 432 ++E++AL +E Sbjct: 426 EIEREALKRE 435 >UniRef50_UPI000194EB59 PREDICTED: hypothetical protein, partial n=1 Tax=Taeniopygia guttata RepID=UPI000194EB59 Length = 480 Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust. Identities = 236/480 (49%), Positives = 337/480 (70%), Gaps = 17/480 (3%) Query: 387 PDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNE 446 PDKAID++DE S +RM++ S R++RRI Q ++E++A+ +E D K ++ Sbjct: 2 PDKAIDIVDELRSKLRMRLISAAGSR-RINRRIAQKEIEREAIKREGDTEKVKEIERDLA 60 Query: 447 ELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKI 506 + ++E++Y+ +WKAEK + Q K ++EQ ++A R GD A+++E++Y K+ Sbjct: 61 AMREEEKEYTA---KWKAEKDLIDRIQQNKIDIEQLNFEADRAEREGDYAKVAEIRYSKV 117 Query: 507 PELEKQLEAATQLEGKTMR----LLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRM 562 EK+ A Q + K M+ L++ +V +IA+V++RWTGIPV++M++SE+EKLL + Sbjct: 118 QAKEKE-NAEIQEQLKIMQGEKALIKEEVDAEDIADVVSRWTGIPVNKMVQSEKEKLLHL 176 Query: 563 EQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFM 622 E ELH RV+GQ +A+ A+++A+RRSRAGL DP RPIGSF+FLG TGVGKTEL KALA ++ Sbjct: 177 EAELHQRVVGQEDAIRAIADAVRRSRAGLNDPRRPIGSFIFLGTTGVGKTELAKALAEYL 236 Query: 623 FDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKA 682 FD + M RIDMSE+ EKHSVSRLVGAPPGYVGYEEGG LTE+VRR+PY V+L DE+EKA Sbjct: 237 FDDENMMTRIDMSEYQEKHSVSRLVGAPPGYVGYEEGGQLTESVRRKPYQVVLFDEIEKA 296 Query: 683 HPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD-------YA 735 HPD FNILLQVLDDGRLTD +GR V+F+NT++IMTSN+GS LI+E F +L Sbjct: 297 HPDTFNILLQVLDDGRLTDNKGRNVNFKNTIIIMTSNMGSQLIRENFSKLTPQNKPKVVE 356 Query: 736 HMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEE-RGYEIH 794 K VL ++ N RPEF+NRIDE+++F PL I I +QL + + L++ G E+ Sbjct: 357 ETKAQVLEMLKENIRPEFLNRIDEIIMFTPLNRTEIEEIVGLQLHSIQRMLQKSSGIELK 416 Query: 795 ISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIV 854 I+ +AL L++ GYDP +GARP+KRAI + + N L++ IL+ ++ I ++V D +V Sbjct: 417 ITPKALSYLADEGYDPEFGARPVKRAIHRLVLNQLSKDILAQKVDRSHPITIDVENDDLV 476 >UniRef50_C7PG59 ATPase AAA-2 domain protein n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PG59_CHIPD Length = 816 Score = 447 bits (1150), Expect = e-124, Method: Compositional matrix adjust. Identities = 288/851 (33%), Positives = 462/851 (54%), Gaps = 73/851 (8%) Query: 11 QLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINA------GQLRTDI 64 Q A+ AQ+LA H + P HL+ A L++E G ++P L + I+ ++R D Sbjct: 14 QSAIRIAQALAKEHHHANYTPAHLLLACLHKEVG-ITPQLQAMNIDTYYLEEWAEVRLDS 72 Query: 65 NQALNRLPQVEGTGGDVQPSQD--LVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTL 122 RLP+ QP D VL D + + D + VL A+ + G Sbjct: 73 VPKAGRLPE--------QPDADEYAANVLQEADAV-RLEYDLDAADAWCVLVAISTPGVG 123 Query: 123 ADI--LKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPV 180 LK A + + + + +KY LT+ + Sbjct: 124 FSFEQLKTFPLQRAQLLSHFNKKDSNGAAPKTTIVTGKSVAQKYIYKLTDPQRLQAKHAL 183 Query: 181 IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL 240 GRD E+R +++L R+ +++ ++ GE GVGKTA+ + LA I+ + P L+ + AL Sbjct: 184 AGRDAEVRTMMEILTRKGRSSILITGEGGVGKTALADALASAILQKQAPLQLQQTDIYAL 243 Query: 241 DMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVG--AGKADGAMDAGNM 298 D GA +AGA Y+ E E+RL+ +++ L ++ G +LFID LHT++ G A G GN+ Sbjct: 244 DYGAFIAGAAYKNELEDRLQQIMSQL-QEAGRHVLFIDNLHTLLDKQPGSAGGI---GNV 299 Query: 299 LKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYE 358 LK A+ +G++ + +T + +R+ IE D L F+ V +AEP +++ + YE Sbjct: 300 LKAAMNKGDITLIATSTPEGFRKLIEPDGLLRHCFEVVQLAEPDEATAARMIQAVMPDYE 359 Query: 359 LHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418 ++++++ I A LS RY+ +R LPD A++L+D ++IR D+ LD L + Sbjct: 360 SYYNLKVAPEVISEAIKLSRRYLKERSLPDSAVNLLDRTLAAIRTTQDTGKITLDDLKAK 419 Query: 419 IIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAE 478 + EA+ + L ++YS L T ++ + Sbjct: 420 L---------------EAAGDSREELRWWYQQCMQRYSALV------------TTRLQPQ 452 Query: 479 LEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAE 538 + KI E A + L +++L+ P +E Q A VT ++A Sbjct: 453 QDIYKIDNEAALKTALLDIIAQLE----PLVETQHVA---------------VTGIDLAT 493 Query: 539 VLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPI 598 ++A TGIP+ ++ ERE+L+ M+ EL RV+GQ+ A+ VS AI SR+GL+ P +PI Sbjct: 494 MIAESTGIPLGKIQSGERERLVNMDLELRKRVVGQDHALKTVSEAILESRSGLSRPGQPI 553 Query: 599 GSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEE 658 GSF FLGPTG GKTEL K+LA+F+F + M+R DMSEF E+HS + L GAPPGYVGYEE Sbjct: 554 GSFFFLGPTGTGKTELAKSLADFLFQDERCMIRFDMSEFKEEHSAALLYGAPPGYVGYEE 613 Query: 659 GGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTS 718 GG L +R++PY+V+L DE+EKAHP VF+I LQ++D+G+L D G+T DF N +++ TS Sbjct: 614 GGLLVNKIRQQPYAVVLFDEIEKAHPSVFDIFLQIMDEGKLHDRLGKTGDFSNALILFTS 673 Query: 719 NLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQ 778 N+GSD+I + F + ++L + +++ NFRPEF+ R+ E+V F P+ ++++ I I Sbjct: 674 NIGSDVIAQSFRQGVIPASQQL-MEIMARNFRPEFLGRLTEIVPFGPIQQENVVKIFDIH 732 Query: 779 LKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGEL 838 LK L + L ++ + +S A + L+ GY P+YGARPLK I+ ++ PL++ I+ G L Sbjct: 733 LKHLLQLLTQQQITLDVSVAAREKLAAEGYSPLYGARPLKEVIRSRLRKPLSRMIIEGSL 792 Query: 839 VPGKVIRLEVN 849 P ++L+++ Sbjct: 793 QPHTTVKLDID 803 >UniRef50_UPI000185C840 putative chaperone protein n=1 Tax=Capnocytophaga sputigena ATCC 33612 RepID=UPI000185C840 Length = 825 Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust. Identities = 261/691 (37%), Positives = 403/691 (58%), Gaps = 51/691 (7%) Query: 161 LKKYTIDLTE--RAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEG 218 L+KY ++ + +A+ K PV GR E ++ ++L R +K N ++IG+ G+GKT ++ Sbjct: 165 LQKYCVNKKDVLKAKASKEIPV-GRVAETQKITEILCRFSKQNVLIIGDSGIGKTTLINS 223 Query: 219 LAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFID 278 Q++I+ +VP+ L V LDMGAL+AGA Y+GE E+R+K + +L KQ +L I+ Sbjct: 224 FVQKVISNQVPDVLSNLAVFELDMGALIAGASYKGEIEDRIKNIAQEL-KQYPKSVLIIE 282 Query: 279 ELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFV 338 ELH ++G D +M N+LK L +G L +G +T+DE+ + IEK + LE F+KV + Sbjct: 283 ELHALLG-NSFDSSM--ANLLKSELTKG-LTVIGTSTIDEFTKKIEK-SGLEPLFEKVEL 337 Query: 339 AEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAA 398 E E +LR YE HHH+ ITD AI A LS RY+ ++ LP AIDLID Sbjct: 338 QESDDETHFRMLRQTLSAYENHHHIAITDEAIWEAIRLSKRYLKEKSLPASAIDLIDHTM 397 Query: 399 SSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSEL 458 S ++ S +E + L +II L+ Q ++E KK L ++ Sbjct: 398 SVVKTAGASFLKEKNALLTQIIHLEDNTQGF---TEEQRKKNAAWLLNDIK--------- 445 Query: 459 EEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGK--IPELEKQLEAA 516 Q I L+ + + E+ + A + L YG+ I E EK + Sbjct: 446 --------------QRIPFLLDASTLLEEEQTTTFETAD-NLLSYGRKLITEAEKVAQEK 490 Query: 517 TQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEA 576 R+ +T+ ++A ++++ T IP+ ++ E E+++L M+ L RV+GQ+ A Sbjct: 491 -----------RSHITEWDLAVLISQKTNIPIGKLKEEEKQRLSDMDAILSERVVGQDHA 539 Query: 577 VDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSE 636 + +S A+ +R+GL+ +PIGSF FLGPTG GKTEL K+LA F+F + A++R DMSE Sbjct: 540 IAIISEAVLENRSGLSKAGQPIGSFFFLGPTGTGKTELAKSLAEFLFQDENAIIRFDMSE 599 Query: 637 FMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDD 696 F E+HS + L GAPPGYVGYEEGG L +R++PYS++L DE+EKAH VF++ LQ++D+ Sbjct: 600 FKEEHSAALLYGAPPGYVGYEEGGLLVNKIRQKPYSIVLFDEIEKAHASVFDVFLQIMDE 659 Query: 697 GRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINR 756 G+L D G+ DF N +++ TSN+GSD I + F E + L L ++S FRPEF+ R Sbjct: 660 GKLHDRLGKEGDFSNAIILFTSNIGSDFIVKSFTEGNIPSSSTL-LEIMSRYFRPEFLGR 718 Query: 757 IDEVVVFHPLGEQHIASIAQIQLKR-LYKRLEERGYEIHISDEALKLLSENGYDPVYGAR 815 + E+V F P+ +++ I +I LK+ L E ++I+ E + L+E GYD YGAR Sbjct: 719 LTEIVPFAPISKENALKIFEIHLKKELLNLTEGINISLNIAQEVKEHLAEQGYDATYGAR 778 Query: 816 PLKRAIQQQIENPLAQQILSGELVPGKVIRL 846 PLK I+ ++ PLA+++++GE G I + Sbjct: 779 PLKGIIRAKLRRPLAKKLVAGEFKEGDTIEV 809 >UniRef50_B3EPU4 ATPase AAA-2 domain protein n=4 Tax=Chlorobiaceae RepID=B3EPU4_CHLPB Length = 440 Score = 438 bits (1126), Expect = e-121, Method: Compositional matrix adjust. Identities = 208/430 (48%), Positives = 309/430 (71%), Gaps = 13/430 (3%) Query: 430 MKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQA 489 M SD +++RL+ + ++L+D + ++ W AEK + ++++K++LE + E+ Sbjct: 1 MNSSD--TRQRLEDIEKQLADLNEEQRRIQARWDAEKGLVQESRSLKSKLEDLRHQAEEY 58 Query: 490 RRVGDLARMSELQYGKIPELEKQLEA-ATQLEGKTMR---LLRNKVTDAEIAEVLARWTG 545 R GD +++E++Y I ++EKQ+E ++E K +++ ++ +IA+++++WTG Sbjct: 59 ERSGDYGKVAEIRYSSIADIEKQIEENKLKIEEKQASGELIMKEEIDAGDIADIVSKWTG 118 Query: 546 IPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLG 605 IPVS+M++SER+KLL ++QELH RVIGQ++AV AVS A++RSRAG+ D RPIGSF+FLG Sbjct: 119 IPVSKMLQSERQKLLLIDQELHKRVIGQDKAVQAVSEAVKRSRAGMGDEKRPIGSFIFLG 178 Query: 606 PTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEA 665 PTGVGKTEL + LA ++FD ++AM+RIDMSE+ME HSVSRLVGAPPGY+GYEEGG LTEA Sbjct: 179 PTGVGKTELARTLAEYLFDDEDAMIRIDMSEYMESHSVSRLVGAPPGYIGYEEGGQLTEA 238 Query: 666 VRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLI 725 VRRRP+SV+LLDE+EKAHPDVFNILLQ+LDDGRLTD +G TV+F+NT++IMTSN+G+ LI Sbjct: 239 VRRRPFSVVLLDEIEKAHPDVFNILLQILDDGRLTDSKGHTVNFKNTIIIMTSNIGAQLI 298 Query: 726 QERFGELDYAH-------MKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQ 778 Q ++D + +++ + ++ +PEF+NRIDEV++F PL + + I IQ Sbjct: 299 QSEMEKMDGENRDAVLETLQDKLFLLLKQQVKPEFLNRIDEVILFTPLTRKDLEKIVTIQ 358 Query: 779 LKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGEL 838 + K + +H+ D AL LS G+DP +GARPLKR +Q+ I N L++ IL G + Sbjct: 359 FNSINKLALRQNISLHLDDSALTWLSNAGFDPAFGARPLKRVMQRSITNKLSEMILEGTV 418 Query: 839 VPGKVIRLEV 848 G +++ V Sbjct: 419 REGDSVQVTV 428 >UniRef50_B3QUJ2 ATPase AAA-2 domain protein n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QUJ2_CHLT3 Length = 443 Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust. Identities = 209/426 (49%), Positives = 309/426 (72%), Gaps = 11/426 (2%) Query: 440 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499 RL ++++L++ + ++ +W+++K + + +K+++E+AK+ E+ R G+ +++ Sbjct: 14 RLAEIDQQLANLREEQERIQAKWQSQKELIMSIRKLKSDIEEAKVQAEEFERQGNYGKVA 73 Query: 500 ELQYGKIPELEKQLEAATQ----LEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESE 555 EL+YGKI +LEK+LE + L L++ + +IA+V+++WTGIPVS+M++SE Sbjct: 74 ELRYGKITQLEKELEQGKKKVEALRASGNMLMKEDIESKDIADVVSKWTGIPVSKMLQSE 133 Query: 556 REKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELC 615 R+K+L +E EL RVIGQ EA+ AVS A++R+RAGL+D RPIGSF+FLG TGVGKTEL Sbjct: 134 RQKILNIEDELRKRVIGQREAIHAVSEAVKRARAGLSDEKRPIGSFIFLGTTGVGKTELA 193 Query: 616 KALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVIL 675 ++LA ++F+ ++AMVRIDMSE+ME +VSRLVGAPPGYVGYEEGG LTEAVRR+P+SV+L Sbjct: 194 RSLAAYLFNDEDAMVRIDMSEYMEAFNVSRLVGAPPGYVGYEEGGQLTEAVRRKPFSVVL 253 Query: 676 LDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD-- 733 LDE+EKAHPDVFNILLQVLDDGRLTD +G TV+FRNT++IMTSNLGS LIQE +L Sbjct: 254 LDEIEKAHPDVFNILLQVLDDGRLTDNKGHTVNFRNTIIIMTSNLGSHLIQEEMAKLTDE 313 Query: 734 -----YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEE 788 ++ + ++ + RPEF+NR+DE ++F PL + + I IQ +R+ + ++ Sbjct: 314 NKETILPELRAKLFDLMRKSLRPEFLNRVDETILFTPLTREDLKQIVDIQFERIRQTAQK 373 Query: 789 RGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEV 848 + + I+DEA L + GYDP +GARPLKR +Q+ I N LA++IL GE+ G I + + Sbjct: 374 QNILLRITDEAKNWLGQLGYDPHFGARPLKRVMQRYITNELAEKILGGEVSDGDSIEIVL 433 Query: 849 NEDRIV 854 +++V Sbjct: 434 ENNQLV 439 >UniRef50_C5NWU6 Negative regulator of genetic competence ClpC/MecB n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NWU6_9BACL Length = 871 Score = 428 bits (1101), Expect = e-118, Method: Compositional matrix adjust. Identities = 261/681 (38%), Positives = 392/681 (57%), Gaps = 71/681 (10%) Query: 167 DLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIING 226 D+T +A+ G+L VIGRDEEIR+ VL RR KNN +L+G+ GVGK+AIV+G+A RI Sbjct: 238 DITLKAKNGELMDVIGRDEEIRKVEMVLTRRDKNNVILLGDGGVGKSAIVDGIAMRIAKN 297 Query: 227 EVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGA 286 E+ LKG+++L + L AK G E + + ++ K+E +VILFIDE+H + Sbjct: 298 EIV-SLKGKKILQFSLNDL--KAKIGGVTSEGIIKFIEEM-KREKDVILFIDEIHML--- 350 Query: 287 GKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDT 346 G+ MDA KP +ARG+ +GATT E++ YI D AL RRF+KV V EPS+E+T Sbjct: 351 GRVKHIMDA---FKPLMARGDFRIIGATTPMEWKLYISSDTALVRRFEKVIVDEPSIEET 407 Query: 347 IAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQID 406 I I++ + YE H V + I A L+ +Y+ +LPD A +ID A + R I+ Sbjct: 408 INIVKNVSSVYENFHRVNFEENTIELAVRLAKKYLKGEKLPDSAFTVIDNAGALAR--IE 465 Query: 407 SKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEK 466 + + + D R KL++Q ES E ++ +D + + L K R +++ E+ Sbjct: 466 ANQDIVMIRDYRNEVNKLKKQLKEAESIEYNEAAVDDIRKRLELKVR-------DFQKER 518 Query: 467 ASLS-GTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMR 525 +L+ K E K A+EQ + G R +L+ GK Sbjct: 519 NNLTFNNYEFKITKEDIKKAVEQ--KAGVKIREKDLKVGK-------------------- 556 Query: 526 LLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIR 585 DA+ E E +L ++ L +VIGQ EA + ++ A+ Sbjct: 557 -------DAD-----------------EEELSRLSNLKSILATKVIGQMEATNTIAEAVI 592 Query: 586 RSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSR 645 RS+ G +P RPIG FLFLG +GVGKTE K L+ + S + ++R+DMSE+ ++H V++ Sbjct: 593 RSKTGFRNPKRPIGVFLFLGTSGVGKTETAKVLSEELTGSVDDLIRLDMSEYQQEHEVAK 652 Query: 646 LVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGR 705 L+GAPPGYVG+ GG LT AV+ P SV+LLDE+EKAHP +++++LQV DDG LTDG G Sbjct: 653 LIGAPPGYVGFRSGGILTRAVKNNPKSVVLLDEIEKAHPRIYDLMLQVFDDGILTDGMGE 712 Query: 706 TVDFRNTVVIMTSNLGSDLIQE--RFGELDYAH---MKELVLGVVSHNFRPEFINRIDEV 760 VDF NT++I+TSNLGS+LI+E + G Y ++E + +++ FRPE +NRIDE+ Sbjct: 713 RVDFSNTIIILTSNLGSNLIREEKKVGFAKYGMEQIIQEKTMRAINNFFRPELLNRIDEI 772 Query: 761 VVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRA 820 V F E+ I I + L++ + ++E GYE+ + EA++ L + YD GAR ++R Sbjct: 773 VTFKSFTEESIFKITSLLLEKEVEIVKESGYELKFTKEAVRFLVKTTYDSEKGARAIRRG 832 Query: 821 IQQQIENPLAQQILSGELVPG 841 I + IE PL++ I++ + G Sbjct: 833 ITKLIETPLSELIINNCINKG 853 >UniRef50_A5FES3 ATPase AAA-2 domain protein n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FES3_FLAJ1 Length = 819 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 245/706 (34%), Positives = 403/706 (57%), Gaps = 50/706 (7%) Query: 155 EDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214 E ++ L KY I + ++ P IGR+ E+ ++L R +K N +LIG+ G+GK+ Sbjct: 154 EVKKGFLSKYCIHKNLEKNKKRI-PAIGREAELNAIKEILCRFSKPNVLLIGDRGIGKSI 212 Query: 215 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 274 +++ L Q +I +VP+ L ++ LD+ +L+AGA Y+GE E+RLK + +L KQ I Sbjct: 213 LIDTLVQNVITNQVPDALNKVQLFELDLSSLIAGASYKGEIEDRLKNCIQEL-KQYPRAI 271 Query: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334 L I+E+H ++ D + N+LK LA+G L+ + +T+DE+ + IEK+ L F+ Sbjct: 272 LIIEEIHILLDKNGGDSGV--SNVLKGELAKG-LNIIATSTIDEFSKRIEKEQGLSGMFE 328 Query: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394 V + E E ++R + Y+ HH +QI D I + LS RY+ ++ LP+ AI+LI Sbjct: 329 IVKLEESDDETLFRMIRESIKTYQEHHKIQIDDETISESIRLSRRYLKEKSLPESAINLI 388 Query: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQ 454 D S ++ ++ E + R+ LK L S++ K + +L +K Sbjct: 389 DHTMSVLKTSGETFLNEKQSIINRLNLLKENTSNL---SEDQLIKEYNWFLVDLINKTTF 445 Query: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLE 514 +++E+ EK + +++I +E +E EK L+ Sbjct: 446 LMDVDEQ--NEKRNFETSESILNYIENLIKTLE----------------------EKALD 481 Query: 515 AATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574 + +E + L ++A+ TGIP ++ E E++KL +E+ L+ RVIGQ+ Sbjct: 482 KRSHIEAFDLSL------------IIAKKTGIPAGKLKEEEKQKLNNIEEVLNRRVIGQD 529 Query: 575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 634 + V+ +I +R+GL+ +PI SF FLGPTG GKTEL K+LA F+F + A++R DM Sbjct: 530 HCIATVAGSILEARSGLSKAGQPIASFFFLGPTGTGKTELAKSLAEFLFQDENAIIRFDM 589 Query: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694 SEF E+HS + L GAPPGYVGYEEGG L +R++PYS++L DE+EKAHP VF++ LQ++ Sbjct: 590 SEFKEEHSAALLYGAPPGYVGYEEGGLLVNKIRQKPYSIVLFDEIEKAHPSVFDVFLQIM 649 Query: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERF--GELDYAHMKELVLGVVSHNFRPE 752 D+G+L D G+ DF N +++ TSN+G+D I F GE+ + ++ ++ + FRPE Sbjct: 650 DEGKLHDRLGKEGDFSNAIILFTSNIGADHIVNTFNNGEIPTSGS---LMEIMGNYFRPE 706 Query: 753 FINRIDEVVVFHPLGEQHIASIAQIQLKRLY-KRLEERGYEIHISDEALKLLSENGYDPV 811 F+ R+ E+V F P+ +++ I +I LK+ + L+ ++ I EA L+ENGY+ Sbjct: 707 FLGRLTEIVPFAPISKENALKIFEIHLKKEFMDLLKNINIKVEIPMEAKLYLAENGYNAK 766 Query: 812 YGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857 YGARP+K I+ + PLA++I+SGE+ G I + + + + V+ Sbjct: 767 YGARPIKSIIRSHLRRPLAKKIISGEVKDGDTISVTIENNEVKWVK 812 >UniRef50_A9BF41 ATPase AAA-2 domain protein n=14 Tax=cellular organisms RepID=A9BF41_PETMO Length = 830 Score = 401 bits (1031), Expect = e-110, Method: Compositional matrix adjust. Identities = 187/325 (57%), Positives = 246/325 (75%), Gaps = 10/325 (3%) Query: 530 KVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA 589 ++T+ +IAE+++ WTG+P+ ++ E EKLL +E LH RV+GQ+EA+ +V+ AIRR+R+ Sbjct: 476 QITEEDIAEIISNWTGVPLRQLRAEEMEKLLNLEAVLHERVVGQDEAIKSVAKAIRRARS 535 Query: 590 GLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGA 649 GL DP RP G F+FLGPTGVGKTEL K LA ++F ++ +VRIDMSE+MEK SVSRLVGA Sbjct: 536 GLKDPRRPTGVFMFLGPTGVGKTELAKTLATYLFGNETHLVRIDMSEYMEKFSVSRLVGA 595 Query: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709 PPGYVGY+EGG LTE VRRRPYSVILLDE+EKAH DV+NILLQ++D+GRLTD QGRTVDF Sbjct: 596 PPGYVGYDEGGQLTEIVRRRPYSVILLDEIEKAHTDVYNILLQIMDEGRLTDSQGRTVDF 655 Query: 710 RNTVVIMTSNLGSD----------LIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDE 759 RNT++IMTSNLGS+ ++E E +Y +KE V+ V F+PEFINR+D+ Sbjct: 656 RNTIIIMTSNLGSEQISKTKRSLGFVEEGTIESEYKDIKEQVMSAVKAAFKPEFINRLDD 715 Query: 760 VVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKR 819 V+VFHPL + + +I IQL L RLEER + + + A+ L E GYD V+GARPLKR Sbjct: 716 VIVFHPLTKNQLKNIISIQLSDLKSRLEERNLTLSVKESAIDFLLEKGYDSVFGARPLKR 775 Query: 820 AIQQQIENPLAQQILSGELVPGKVI 844 AIQ+ IE+PL++++L G+ G I Sbjct: 776 AIQRYIEDPLSEELLKGKYEEGDKI 800 Score = 309 bits (792), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 171/355 (48%), Positives = 236/355 (66%), Gaps = 17/355 (4%) Query: 74 VEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL-ESRGTLADILKAAGAT 132 +G G QP+ R+L L ++ G N I +E +L E+ G + ILK +G Sbjct: 72 TQGIIGSPQPTPRAKRILELAYDESELMGFNKIDAEHLLLGICREAEGIASHILKRSGIN 131 Query: 133 TANITQAI-EQMRGGESV-------NDQGAEDQRQA------LKKYTIDLTERAEQGKLD 178 + + + + M G S ++ E +RQ L++Y DLT +AE KLD Sbjct: 132 LTLMRKELTDMMIKGRSTGRMEIAKTEELEERKRQKQNALKQLEEYGTDLTAQAENRKLD 191 Query: 179 PVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVL 238 P+IGR+ EI R +++L RR KNNPVLIGE GVGK+A+VEGLAQRI+ G VPE LK + + Sbjct: 192 PIIGREIEINRIMEILARRKKNNPVLIGEAGVGKSAVVEGLAQRIVEGRVPEILKNKTIF 251 Query: 239 ALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADG-AMDAGN 297 +LD+ ++VAG KYRGEFE+R+K ++ L K E ++ILFIDELH +V AG A+G +MDA N Sbjct: 252 SLDITSIVAGTKYRGEFEKRMKKLMQILQKTE-DIILFIDELHMIVEAGAAEGSSMDAAN 310 Query: 298 MLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERY 357 +LKPALA GE+ +G+TT +EYR++IEKD ALERRFQK++V EP++E+TI IL G+K +Y Sbjct: 311 VLKPALANGEITVIGSTTANEYRKFIEKDPALERRFQKIYVTEPTIEETINILSGIKFKY 370 Query: 358 ELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEEL 412 E HH V+ AI +A LS RYI DR LPDKAID+IDEA + R+ + P++L Sbjct: 371 EEHHKVKYNHGAIQSAVQLSVRYITDRHLPDKAIDVIDEAGAKARLSALTLPDKL 425 >UniRef50_Q8IM28 ATP-dependent CLP protease, putative n=6 Tax=cellular organisms RepID=Q8IM28_PLAF7 Length = 1341 Score = 394 bits (1012), Expect = e-108, Method: Compositional matrix adjust. Identities = 211/592 (35%), Positives = 353/592 (59%), Gaps = 29/592 (4%) Query: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220 +K ID+ A++ D GR +EI+R I++L R+ K+NP+LIGE GVGKTAI+E L+ Sbjct: 506 MKDCLIDMVHEAQEKGDDHFFGRKKEIKRIIEILGRKKKSNPLLIGESGVGKTAIIEYLS 565 Query: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280 I+ VP LK R+ L++G +VAG KYRGEFEE++K +L+++ K++ N ILFIDE+ Sbjct: 566 YLILKDNVPYHLKNCRIFQLNLGNIVAGTKYRGEFEEKMKHLLSNMNKKKKN-ILFIDEI 624 Query: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340 H +VGAG +G++DA N+LKP L+ L C+G TT EY ++IE D AL RRF V + Sbjct: 625 HVIVGAGSGEGSLDASNLLKPFLSSDNLQCIGTTTFQEYSKFIENDKALRRRFNCVTINP 684 Query: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400 + ++T +L+ +K YE +H++ TD ++ + +L+ Y+ PDKAID++DEA Sbjct: 685 FTSKETYKLLKKIKYNYEKYHNIYYTDDSLKSIVSLTEDYLPTANFPDKAIDILDEAGVY 744 Query: 401 IRMQIDSKPEELDRLDR-RIIQLKLEQQ--------------------ALMKESDEASKK 439 +++ + ++ R +R R I++ + Q + E Sbjct: 745 QKIKYEKFMKQKLRAERLRKIRIHMNTQENNNNNNNNNNNISNNNNDYIISDEDQHIHNN 804 Query: 440 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499 N ++ ++++++S E+ K + +T K E++ E Sbjct: 805 NYGYNNYDVINQQKEFSNDEDINKLNDDDTNLRKTYKQEIDNKIKNDENGNNNIKTDTNG 864 Query: 500 ELQYGKIPELEKQLEAATQ--LEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESERE 557 + + L+ T+ +E M+ VT I ++++ + I + + E E Sbjct: 865 NILINNVESLQNDTYDETRNLIENVHMKY----VTSDVIENIVSKKSSITYIKKNKKEEE 920 Query: 558 KLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKA 617 K+L+++++L+ +IGQ + +D +S + ++ + DPN+PIG+ L G +GVGKT + Sbjct: 921 KILKLKEKLNKIIIGQEKVIDILSKYLFKAITNIKDPNKPIGTLLLCGSSGVGKTLCAQV 980 Query: 618 LANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLD 677 ++ ++F+ D +V I+MSE+++KHSVS+L G+ PGYVGY+EGG LTE+V+++P+S+IL D Sbjct: 981 ISKYLFNEDNLIV-INMSEYIDKHSVSKLFGSYPGYVGYKEGGELTESVKKKPFSIILFD 1039 Query: 678 EVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERF 729 E+EKAH +V ++LLQ+LD+G LTD +G V F+NT + MT+N+GSD+I + F Sbjct: 1040 EIEKAHSEVLHVLLQILDNGLLTDSKGNKVSFKNTFIFMTTNVGSDIITDYF 1091 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 38/113 (33%), Positives = 66/113 (58%), Gaps = 4/113 (3%) Query: 749 FRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEAL--KLLSE- 805 F PEF+NRIDE ++F ++ I +I Q + L KR+++R I D+ + + S+ Sbjct: 1218 FLPEFLNRIDEKIIFRQFLKRDIINILQNMIDDLKKRIKKRKNINLIIDKNVINYICSDE 1277 Query: 806 -NGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857 N YD +GAR ++RA+ + IE+P+A ++S P I +++ D+ + VQ Sbjct: 1278 NNIYDMNFGARSIRRALYKYIEDPIAAFLISNIHEPNDSIYVQLTNDKKIKVQ 1330 >UniRef50_C4W7H5 ATPase AAA-2 domain protein n=1 Tax=Staphylococcus warneri L37603 RepID=C4W7H5_STAWA Length = 882 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 242/699 (34%), Positives = 380/699 (54%), Gaps = 81/699 (11%) Query: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220 L+ +I++T++A ++ PVI R++EI L RR KNN LIG+ GVGK+AIVEGLA Sbjct: 241 LEDISINITDKARNEEILPVINREKEIHHLEIALSRRDKNNVALIGKGGVGKSAIVEGLA 300 Query: 221 QRIINGEVPEGLKGRRVLALDMGALVA---GAKYRGEFEERLKGVLNDLAKQEGNVILFI 277 +I+N E+P L +++L M L++ G +RG ++ ++++ K E +VILF+ Sbjct: 301 LKIVNKEIP-SLINKKILQFSMNDLISVIQGDTFRG-----IQRFMSEM-KSEKDVILFV 353 Query: 278 DELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVF 337 DE+H + GK G D +LKPA+AR + +GATT E++ YI D AL RRF+ V Sbjct: 354 DEIHML---GKYKGITD---ILKPAMARNDFRIIGATTPSEWQNYISSDIALTRRFEIVN 407 Query: 338 VAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEA 397 + EP+VEDTI I+ YE H V + I A L +Y QLPD A ++D A Sbjct: 408 INEPTVEDTIEIINEAISVYENFHQVNFEEETIELAVKLGKKYFQKEQLPDLAFTILDNA 467 Query: 398 ASSIRMQIDSKPEELDRLDRRIIQLKLE-QQALMKESDEASKKRLDMLNEELSDKERQYS 456 + R++ + ++ LKL +QA +S E + +++D + +E+ E++Y+ Sbjct: 468 GAICRIERGQFTNIQLNYEDKMNDLKLTLKQA---QSIEFNDQQIDEIRKEIKQLEKEYA 524 Query: 457 ELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAA 516 + +S I E K AIEQ ++G+ I LE Q Sbjct: 525 ------RNITSSKKMVFPINVTKEHIKKAIEQ--KLGE----------SIDGLEFQ---- 562 Query: 517 TQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEA 576 D + +++ E +L ++ + ++IGQ++A Sbjct: 563 ---------------GDEQFSDI---------------ELNRLRSLKAVMKSQIIGQDDA 592 Query: 577 VDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSE 636 ++ ++NA+ R + G N P+G F+ LG TGVGKTE K L ++ + ++R DMSE Sbjct: 593 INTIANAVIRKKLGFKQHNHPVGVFMLLGTTGVGKTETAKILNRTLYKDESNIIRFDMSE 652 Query: 637 FMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDD 696 + + H VS+L+G PPGYVGY G L + V P +VIL DEVEKAHP +F+ILLQV DD Sbjct: 653 YQKDHEVSKLIGPPPGYVGYGRDGDLVKTVLEHPNAVILFDEVEKAHPKIFDILLQVFDD 712 Query: 697 GRLTDGQGRTVDFRNTVVIMTSNLGSD---------LIQERFGELDYAHMKELVLGVVSH 747 RLT+ G +F ++++TSN+G+ L Q+ E D+ + E + +++ Sbjct: 713 ARLTNSLGEVANFSECIILLTSNIGTSDIRHKKVIGLNQQNNDETDFVTVDESIKNALNN 772 Query: 748 NFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENG 807 FRPEF+NRIDE + F PL +Q I I + L++ +E GY I S A++L+++ Sbjct: 773 YFRPEFLNRIDEFITFKPLDQQEIFEITNLLLEKEKTLVESLGYNIEFSSSAMRLIAKLC 832 Query: 808 YDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRL 846 Y+P GARP+KR I + +E+ L+ +I++G L G I + Sbjct: 833 YEPKNGARPIKRGISKLLEDRLSDEIINGTLQKGDNIEV 871 >UniRef50_B3LAU4 ATP-dependent Clp protease, putative n=1 Tax=Plasmodium knowlesi strain H RepID=B3LAU4_PLAKH Length = 1243 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 233/638 (36%), Positives = 373/638 (58%), Gaps = 56/638 (8%) Query: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220 +K D+ A + + GR +EI+R I++L RR K+NP+LIGE GVGKTAIVE L+ Sbjct: 479 VKDCLTDMVHAAYEKGDEHFFGRKKEIKRIIEILGRRKKSNPLLIGESGVGKTAIVEHLS 538 Query: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280 I+ +VP L+ R+ L++G +VAG KYRGEFEE++K +L+++ K++ N ILFIDE+ Sbjct: 539 YLILKDKVPYHLRNCRIYQLNVGNIVAGTKYRGEFEEKMKHLLSNMNKKKKN-ILFIDEI 597 Query: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340 H +VGAG +G++DA N+LKP L+ L C+G TT EY +YIE D AL RRF V V Sbjct: 598 HVIVGAGSGEGSLDASNLLKPFLSSDNLQCIGTTTFQEYTKYIEADKALRRRFNCVPVKP 657 Query: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAAS- 399 S ++T+ +L+ +K YE +H++ T+ A+ + L+ Y+ PDKAID++DEA + Sbjct: 658 FSAKETLLLLKKIKYNYEKYHNIYYTNDALKSIVMLTEDYLPTANFPDKAIDILDEAGAY 717 Query: 400 -SIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSEL 458 I+ ++ + D RR E A D+ N L++ E+ S Sbjct: 718 QKIKYEMFMRQRLRDERGRRADA----------EPRNAESANGDLANGNLTNGEQMISH- 766 Query: 459 EEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQ 518 ++ T+T + K+ R + Q + E ++ +EA Sbjct: 767 ---------QVNATETSSDDHPPGKL------------RTDDNQPAFVHE-DRNVEAENY 804 Query: 519 LEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVD 578 LE M+ VT I ++++ + I + + E EK+++++++L+ +IGQ + +D Sbjct: 805 LENMHMKY----VTSDVIENIVSKKSSISYIKKNKKEEEKIIKLKEKLNKIIIGQEKVID 860 Query: 579 AVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFM 638 +S + ++ + DPN+PIG+ L G +GVGKT + ++ ++F+ D +V I+MSE++ Sbjct: 861 ILSRYLFKAITNIKDPNKPIGTLLLCGSSGVGKTLCAQVISKYLFNEDNLIV-INMSEYI 919 Query: 639 EKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGR 698 +KHSVS+L G+ PGY+GY+EGG LTE+V+++P+S+IL DE+EKAH +V ++LLQ+LD+G Sbjct: 920 DKHSVSKLFGSYPGYIGYKEGGELTESVKKKPFSIILFDEIEKAHSEVLHVLLQILDNGM 979 Query: 699 LTDGQGRTVDFRNTVVIMTSNLGSDLIQERFG--ELDYAHM-----------KELVLGVV 745 LTD +G V F+NT + MT+N+GSD+I + F +YA++ KE G Sbjct: 980 LTDSKGNKVSFKNTFIFMTTNVGSDIITDYFKLYNKNYANLGFKYYLNKKKNKEETDGSS 1039 Query: 746 SHNFR-PEFINRIDEVVVFHPLG-EQHIASIAQIQLKR 781 H + P+ +N + VV HP G + A+ QI KR Sbjct: 1040 LHKGQLPQGVNSVGNSVVEHPTGLSNNSATDVQINHKR 1077 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 35/113 (30%), Positives = 64/113 (56%), Gaps = 4/113 (3%) Query: 749 FRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEER-GYEIHISDEALKLLS--- 804 F PEF+NRIDE ++F ++ + +I Q ++ L KR+++R + I + +K + Sbjct: 1120 FLPEFLNRIDEKIIFRQFLKRDVVNIFQNMIEDLKKRIKKRKNLNLIIEQDVIKYICSDE 1179 Query: 805 ENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857 N YD +GAR ++RA+ + IE+P+A ++S P I + ++ + VQ Sbjct: 1180 NNIYDMNFGARSIRRALYKYIEDPIASFLISNLCEPNDSIHVSLSNGNKINVQ 1232 >UniRef50_D1QW31 Chaperone protein ClpB n=1 Tax=Prevotella oris F0302 RepID=D1QW31_9BACT Length = 815 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 257/825 (31%), Positives = 434/825 (52%), Gaps = 59/825 (7%) Query: 33 HLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLN 92 HL +A++ ++ G + +LTS + + + D+ ++ VL+ Sbjct: 33 HLATAMMTEQTG-LREILTSMQKDVAYIMDWFDTHKEMYISSGNEASDIIADGEVKLVLD 91 Query: 93 LCDKLAQKRGDNFISSELFVLAALESRGTLADI--LKAAGATTANITQAIEQMRGGESVN 150 ++ K G +++ + L V A+ G + ++ G + +I ++ G S Sbjct: 92 EAERSKIKLGTDYVDA-LCVFTAIVRDGVVYSHQQIEGLGVSEEDI---LDYFNAGASPF 147 Query: 151 DQGAEDQRQALKKYTIDLT--ERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEP 208 G E + + +Y DL E E+GK +IGR +E+R ++ L+R +L+G P Sbjct: 148 SIGEEQEMPSSIQYASDLKRPEILEEGK--TIIGRSKEVRLILENLERAENKAVLLVGAP 205 Query: 209 GVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAK 268 G+GKTAIV+ LA + + + E + ++ L+ ++A E +++ +L L Sbjct: 206 GIGKTAIVKALAHEVASNK-DELINQTALVNLNTPKILAQTSSEAEVGQKITALLQKLNP 264 Query: 269 QEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAA 328 + +L ID+L ++ G A N+L ++ G + V + D YR++IEK Sbjct: 265 SKTKAVLVIDDLQMLLENGNTSNATSLINILDAQISEGTVTLVMLLSTDAYRKHIEKHPI 324 Query: 329 LER-RFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLP 387 + R V EP++ + L G K + + H+ + +T+ AI +A +L++RY ++ P Sbjct: 325 VNRLNVINVEQLEPNILKSA--LLGHKTQLQAHYSLAVTEEAIDSACSLANRYYKEKSQP 382 Query: 388 DKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKR-LDMLNE 446 +DL+D A+S+R+ + E I QL Q K+ E K R L +L Sbjct: 383 ASTLDLLDSTAASVRLSNKNAQE-------TITQLTETYQKYCKQPIEEVKDRDLHLLYH 435 Query: 447 ELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKI 506 + K S + + L+ T + +LE+ + +++ LA +S Sbjct: 436 TIFSK---ISVVLISKIVDNFILTDEDTTQQKLEKIGLILKE------LAEVSA------ 480 Query: 507 PELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQEL 566 K ++A + LE + V+A TGIP+ ++ E+++LL +E +L Sbjct: 481 ----KGMQAVSPLE---------------VEAVVAGDTGIPIGKIQAQEKDRLLGIETKL 521 Query: 567 HHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSD 626 RV GQN+A+ +++AI SR+GL+DP +PIGSF FLGPTG GKTEL K+LA +FD D Sbjct: 522 CERVKGQNKAITTLADAIIESRSGLSDPKKPIGSFFFLGPTGTGKTELTKSLAELLFDDD 581 Query: 627 EAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDV 686 AM+R DMSEF E+HS + L GAPPGYVGYEEGG L +R++PYSV+L DE+EKAH V Sbjct: 582 SAMIRFDMSEFKEEHSAALLYGAPPGYVGYEEGGLLVTKIRQKPYSVVLFDEIEKAHSSV 641 Query: 687 FNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVS 746 +++ LQ++D+G++ D GR DF N+++I TSN+GS I ++ E EL+ V+S Sbjct: 642 YDVFLQMMDEGKIHDKLGREGDFSNSIIIFTSNIGSQWIAQQIQEGHQPKSNELI-EVMS 700 Query: 747 HNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALKLLSE 805 FRPEF+ R+ E+V F P+ E I +Q RL K+ L+++ ++ ++ E + L+E Sbjct: 701 KYFRPEFLGRLTEIVPFSPITESVAQEIFMLQFSRLQKQLLDQKNIQVDLAPETISYLTE 760 Query: 806 NGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNE 850 GY P YGARP+ I+ ++ +++ I+S + G + + +E Sbjct: 761 KGYSPQYGARPIAGVIRTYLKKTISKLIVSETIKQGDKVCVNYHE 805 >UniRef50_C9MS36 ClpB protein n=1 Tax=Prevotella veroralis F0319 RepID=C9MS36_9BACT Length = 813 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 264/790 (33%), Positives = 423/790 (53%), Gaps = 88/790 (11%) Query: 74 VEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL------------ESRGT 121 VE G++ ++ VL+ ++ K G + + + L V +A+ ES G Sbjct: 73 VEHDAGEIIADHEVETVLDEAERSKIKLGTDSVDA-LCVFSAIVRDGVVYSHQQIESIGV 131 Query: 122 LAD-ILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPV 180 D I++ A+T+ ++ + +M G S+ Q D R+A E E+GK + Sbjct: 132 TEDEIMEYFEASTSPLS-PVAEMDMGSSI--QYVSDLRRA---------ELLEEGK--SI 177 Query: 181 IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRI-INGEVPEGLKGRRVLA 239 IGR +EIR ++ L+R + +L+G PGVGKT I+ LA + IN + E + ++ Sbjct: 178 IGRSKEIRLILETLERSERQGILLVGAPGVGKTGIIRALAHEMEINQD--EIINQTSLVG 235 Query: 240 LDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNML 299 L+ ++A + E ++L G+L + + + +L ID+L ++ +G A N L Sbjct: 236 LNTSKILAQSGNETEITQKLTGLLQKMNQAKSRGVLVIDDLQLLLESGNPTAATYILNNL 295 Query: 300 KPALARGELHCVGATTLDEYRQYIEKDAALER-RFQKVFVAEPSVEDTIAILRG--LKER 356 + G + + ++D +R++IEK + R V EP+ ILR LK R Sbjct: 296 DAQICDGAVTLLMVLSMDAFRKHIEKHSIANRLNIINVEELEPN------ILRSALLKHR 349 Query: 357 YEL--HHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDR 414 L ++ + +T+ A ++A LS+RY ++ P +DLID A+S+R+ ++ Sbjct: 350 TILQAYYSLPMTEEAFISAYNLSNRYYKEKSQPASTLDLIDSTAASVRLS--------NK 401 Query: 415 LDRRIIQLKLEQQALMKES--DEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGT 472 I++ +EQ K D+ S L +L + +K +S Sbjct: 402 NAAGIVEQLVEQYEKYKAMPVDDVSDFDLHLLYHTIFNK-----------------VSVV 444 Query: 473 QTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVT 532 T K IE + D E K+ +L K L + L K + KV+ Sbjct: 445 LTSK---------IEDDFVLTDDDSTQE----KLDKLGKMLNELSVLSQKGIE----KVS 487 Query: 533 DAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLA 592 EI V+A TGIP+ ++ E+++LL +E +LH RV GQ++A+ +S+AI SR+GL+ Sbjct: 488 SLEIESVVADDTGIPIGKIQAQEKDRLLGIETKLHERVKGQDKAIRTLSDAIIESRSGLS 547 Query: 593 DPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPG 652 DP +PIGSF FLGPTG GKTEL K+LA+ +FD D AM+R DMSEF E+HS + L GAPPG Sbjct: 548 DPKKPIGSFFFLGPTGTGKTELTKSLADLLFDDDTAMIRFDMSEFKEEHSAALLYGAPPG 607 Query: 653 YVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNT 712 YVGYEEGG L +R++PYSV+L DE+EKAH V++I LQ++D+G++ D GR DF N+ Sbjct: 608 YVGYEEGGLLVTKIRQKPYSVVLFDEIEKAHSSVYDIFLQIMDEGKVHDKLGREGDFSNS 667 Query: 713 VVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIA 772 ++I TSN+GS I E+ + EL+ V+S FRPEF+ R+ EVV F P+ E Sbjct: 668 IIIFTSNIGSQWIAEQIQKGHQPTSNELI-EVMSKYFRPEFLGRLTEVVPFSPITEAVAQ 726 Query: 773 SIAQIQLKRLYKR-LEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQ 831 I +Q RL K+ LE++ ++ ++ E + L+ G+ P YGARP+ ++ ++ +++ Sbjct: 727 QIFLLQFSRLQKQLLEQKDIQLDLAPETIAYLTSKGFSPQYGARPIAGVVRTYLKKTISK 786 Query: 832 QILSGELVPG 841 I+S + PG Sbjct: 787 LIVSEAIKPG 796 >UniRef50_Q64SE5 ATP-dependent Clp protease ATP-binding subunit n=12 Tax=Bacteroidales RepID=Q64SE5_BACFR Length = 812 Score = 378 bits (971), Expect = e-103, Method: Compositional matrix adjust. Identities = 265/853 (31%), Positives = 440/853 (51%), Gaps = 88/853 (10%) Query: 13 ALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL--RTDINQALNR 70 AL A+ +AL + HL+ A+ + G + +L+S + G + D ++ + R Sbjct: 13 ALKIARGMALQDKHNTFGVSHLVMAMFAENTG-LKEILSSMQKDVGYIMEWFDTHREMYR 71 Query: 71 LPQVEGTGGD-VQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLA-----D 124 GT + V+P +++ +VL+ ++ K G + I S + V A+ G + + Sbjct: 72 ---SSGTSTEEVEPDEEVSKVLDESERSKIKLGADSIDS-ICVFTAILREGVVYSHQQIE 127 Query: 125 ILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRD 184 IL + + A+ + + QG E Q A Y +L ++ V+GR+ Sbjct: 128 ILDVSEDDILSHYNALTPLH-----SYQGEEMQITASVPYADNLKKQETINAGGFVVGRE 182 Query: 185 EEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGA 244 +E+R ++ L+R +++GE G+GK++I+ + I E E LK ++ L+ Sbjct: 183 KEVRTILECLERSENKGILIVGESGIGKSSIINAFVKDICENE-DEMLKQISIVGLNTAK 241 Query: 245 LVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALA 304 L+A E +++ +++ L + E +L ID+L ++ + A N+L ++ Sbjct: 242 LLASTSSETEIAQKVVNLMHKLNQLE-QAVLVIDDLQVLLENSVSGKASTLINILSAQIS 300 Query: 305 RGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQ 364 G + V T D YR+ IEK +E R + + E + ++ K+R E ++ ++ Sbjct: 301 EGAANLVLTLTNDSYRKNIEKHP-IEGRLDIIKIEELDTATLESAIQLHKKRIENYYELR 359 Query: 365 ITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRM----------QIDSKPEELDR 414 I+D I + LS RY +R LP AIDL+D A+++R+ +++ EE+ Sbjct: 360 ISDACIKDSIALSKRYFKERSLPSAAIDLLDRTAAAVRLCNKNARASVSDLEADFEEIKS 419 Query: 415 LDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQT 474 LD +I + L L+ S K +L +LSD W E Sbjct: 420 LDEKISEGPL---YLLYRS--VFSKISVVLTTKLSDNYV--------WDKED-------- 458 Query: 475 IKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDA 534 IAI+ R G + + L I E + + Sbjct: 459 --------DIAIKAGRLSGIIKELKALSDQSIEE----------------------IRSS 488 Query: 535 EIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADP 594 EI ++A T IP+ ++ E+++LL +E +L RV GQN A+ +S+AI SR+GL+DP Sbjct: 489 EIEAIVAECTNIPIGKIQAREKDRLLSIESKLQERVKGQNRAITTLSDAIIESRSGLSDP 548 Query: 595 NRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYV 654 +PIGSF FLGPTG GKTEL K+LA +FD + AM+R DMSEF E+HS + L GAPPGYV Sbjct: 549 KKPIGSFFFLGPTGTGKTELTKSLAELLFDDESAMIRFDMSEFKEEHSAALLYGAPPGYV 608 Query: 655 GYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVV 714 GYEEGG L +R++PYSV+L DE+EKAH V+++ LQ++D+G++ D GR DF N+++ Sbjct: 609 GYEEGGLLVTQIRQKPYSVVLFDEIEKAHSSVYDVFLQMMDEGKIHDKLGREGDFSNSII 668 Query: 715 IMTSNLGSDLIQERFGELDYAHMKEL--VLGVVSHNFRPEFINRIDEVVVFHPLGEQHIA 772 I TSN+GS I E ++ H + ++ V++ FRPEF+ R+ EVV F P+ E Sbjct: 669 IFTSNIGSQWIVE---QIQSGHTPDSGKLIEVMAQYFRPEFLGRLTEVVPFAPIDENVAK 725 Query: 773 SIAQIQLKRLYKRL-EERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQ 831 I + RL ++L +++ ++++SDEAL+ L+ GY P YGARP+ I+ I+ +++ Sbjct: 726 QIFNLHFGRLQEQLMKQKNIQLNLSDEALQHLANKGYSPKYGARPIAGVIRTYIKKSVSR 785 Query: 832 QILSGELVPGKVI 844 I+S ++ G I Sbjct: 786 LIVSEQIKSGDNI 798 >UniRef50_A5IMI3 ATPase AAA-2 domain protein n=8 Tax=Thermotogaceae RepID=A5IMI3_THEP1 Length = 791 Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust. Identities = 175/315 (55%), Positives = 242/315 (76%), Gaps = 4/315 (1%) Query: 536 IAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPN 595 +A ++ +WTGIPVSR+MESEREKLL++E+ +H R++ Q EAV V+ IRR+R G+ +P Sbjct: 473 VARIVEQWTGIPVSRIMESEREKLLKLEEFIHQRLVNQEEAVKIVARTIRRARVGIKNPR 532 Query: 596 RPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVG 655 RPIG FLFLGPTGVGKTEL + LA+ +F S++AM+R+DMSE+MEKHSV+RL+GAPPGYVG Sbjct: 533 RPIGVFLFLGPTGVGKTELARTLADVLFGSEDAMIRLDMSEYMEKHSVARLIGAPPGYVG 592 Query: 656 YEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVI 715 YEEGG LTEAVR+RPYSVILLDE+EKAHPDVFNILLQV +DGRLTDG+G TVDFRNT++I Sbjct: 593 YEEGGQLTEAVRKRPYSVILLDEIEKAHPDVFNILLQVFEDGRLTDGKGNTVDFRNTIII 652 Query: 716 MTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIA 775 MTSN+GS E+ E+ ++ + + + F+PEF+NRID +V F PL + + I Sbjct: 653 MTSNIGS----EKILEMSENGVRIEIERELRNTFKPEFLNRIDAIVYFKPLTMEEVKKIV 708 Query: 776 QIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILS 835 +I +++L + L+E+ I +++ A L+E GY P GARPL+R I+ ++E+ +A +IL Sbjct: 709 EIMVRQLQEILKEKNISIELTERAKDYLAEAGYVPSLGARPLRRIIELELESMIADKILE 768 Query: 836 GELVPGKVIRLEVNE 850 GE+ G + ++ +E Sbjct: 769 GEIKEGDRVLVDADE 783 Score = 350 bits (899), Expect = 9e-95, Method: Compositional matrix adjust. Identities = 208/470 (44%), Positives = 304/470 (64%), Gaps = 21/470 (4%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVS-PLLTSAGINAGQLR 61 L+ T K Q + Q + + + H++ A+L +EG +V LL ++ +L+ Sbjct: 4 LEEYTEKAQKVMMSIQDIMTRYRQNQLSSEHILLAIL-EEGNNVGVELLKELNVDINRLK 62 Query: 62 TDINQALN----RLPQVEGTG-GDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLA-A 115 ++ + R+P EG + + D V+ + A++ GD+ I +E +L Sbjct: 63 DEVEVFIGKYGVRVP--EGASVSQIFITPDARHVIEKAREEARRMGDSKIGTEHLILGMV 120 Query: 116 LESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQG 175 L T IL G T + +AI ++R S + +AL ++T+DLT+ A + Sbjct: 121 LSPDSTAFRILSRYGVTPERVYEAIRKIR---STGKTDEAENVEALARFTMDLTQLAREK 177 Query: 176 KLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGR 235 KL PV+ R++EIRR IQ+L RRTKNNPVLIG+PGVGKTA+VEGLAQRI+ G+VP L+ Sbjct: 178 KLMPVVDREKEIRRVIQILSRRTKNNPVLIGDPGVGKTAVVEGLAQRIVEGKVPLFLRNV 237 Query: 236 RVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDA 295 RVL LDMG LVAG ++RG+FEERLK +L++L +++G VILFIDE+HT+VGAG A+GA+DA Sbjct: 238 RVLKLDMGRLVAGTRFRGDFEERLKRLLDELKRKKGEVILFIDEVHTVVGAGAAEGALDA 297 Query: 296 GNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKE 355 N++KP L GE+ +GATT++EYR+YIEKD ALERRFQ V V EP+VE TI IL+GL++ Sbjct: 298 ANIMKPELTTGEIQIIGATTVEEYRKYIEKDRALERRFQPVIVEEPTVEQTIEILKGLRK 357 Query: 356 RYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRL 415 +E HHHV+ITD A+ AA LS RYI +R LPDKA+DLIDEAA+ +R++ S P E Sbjct: 358 VFEEHHHVKITDDALETAAKLSARYITNRFLPDKAVDLIDEAAAYVRLE-SSYPSEELLK 416 Query: 416 DRRIIQLKLEQQ---ALMK-ESDEASKKRLDM--LNEELSDKERQYSELE 459 I+ LE++ A++K E +EA+K ++++ L E +K ++ ++E Sbjct: 417 LEEEIK-NLEEKINDAVVKGEYEEAAKLKVELQRLKNEYEEKRKKQEKVE 465 >UniRef50_A5K1F9 ATP-dependent Clp protease, putative n=1 Tax=Plasmodium vivax RepID=A5K1F9_PLAVI Length = 1222 Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust. Identities = 223/617 (36%), Positives = 362/617 (58%), Gaps = 52/617 (8%) Query: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220 +K D+ + A + + GR +EI+R I++L RR K+NP+LIGE GVGKTAI+E L+ Sbjct: 467 VKDCLTDMVQAAYEKGDEHFFGRKKEIKRIIEILGRRKKSNPLLIGESGVGKTAIIEHLS 526 Query: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280 I+ +VP L+ R+ L++G +VAG KYRGEFEE++K +L+++ K++ N ILFIDE+ Sbjct: 527 HLILKDKVPYHLRNCRIYQLNVGNIVAGTKYRGEFEEKMKHLLSNMNKKKKN-ILFIDEI 585 Query: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340 H +VGAG +G++DA N+LKP L+ L C+G TT EY +YIE D AL RRF V V Sbjct: 586 HVIVGAGSGEGSLDASNLLKPFLSSDNLQCIGTTTFQEYTKYIESDKALRRRFNCVPVKP 645 Query: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400 + ++T+ +L+ +K YE +H++ T+ A+ + L+ Y+ PDKAID++DEA + Sbjct: 646 FTGKETLLLLKKIKYSYEKYHNIYYTNEALKSIVMLTEDYLPTANFPDKAIDILDEAGA- 704 Query: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSE-LE 459 K+ + M+ +RL N E S ++ E +E Sbjct: 705 --------------------YQKIRYEVFMR-------RRLRGENHERS----EWGERVE 733 Query: 460 EEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQL 519 +A+ +G Q + K+ +Q GD S Q G I + +A + L Sbjct: 734 RGGQAKSGQENGGQVNGGQANGGKLRSDQPS--GD-EHGSADQDG-IANQDSGGDARSYL 789 Query: 520 EGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDA 579 + ++ VT I ++++ I + + E EK+++++++L+ +IGQ + +D Sbjct: 790 QNMHIKY----VTSDVIENIVSKKASISYIKKNKKEEEKIIKLKEKLNKIIIGQEKVIDI 845 Query: 580 VSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFME 639 +S + ++ + DPN+PIG+ L G +GVGKT + ++ ++F+ D +V I+MSE+++ Sbjct: 846 LSRYLFKAITNIKDPNKPIGTLLLCGSSGVGKTLCAQVISKYLFNEDNLIV-INMSEYID 904 Query: 640 KHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRL 699 KHSVS+L G+ PGYVGY+EGG LTE+V+++P+S+IL DE+EKAH +V ++LLQ+LD+G L Sbjct: 905 KHSVSKLFGSYPGYVGYKEGGELTESVKKKPFSIILFDEIEKAHGEVLHVLLQILDNGML 964 Query: 700 TDGQGRTVDFRNTVVIMTSNLGSDLIQERFG--ELDYAHM-------KELVLGVVSHNFR 750 TD +G V F+NT + MT+N+GSD++ + F +Y++M K G + Sbjct: 965 TDSKGNKVSFKNTFIFMTTNVGSDIVTDYFKLYNRNYSNMGFKYYLSKRPNRGEADGSLL 1024 Query: 751 PEFINRIDEVVVFHPLG 767 PE +N + V P G Sbjct: 1025 PEGVNSVANSVEEDPTG 1041 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 35/113 (30%), Positives = 63/113 (55%), Gaps = 4/113 (3%) Query: 749 FRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEER-GYEIHISDEALKLLS--- 804 F PEF+NRIDE ++F ++ + +I Q + L KR+++R + I + +K + Sbjct: 1099 FLPEFLNRIDEKIIFRQFLKRDVINIFQNMIDDLKKRIKKRKNLNLIIEPDVIKYICSDE 1158 Query: 805 ENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857 N YD +GAR ++RA+ + IE+P+A ++S P I + ++ + VQ Sbjct: 1159 NNIYDMNFGARSIRRALYRYIEDPIASFLISNLCEPNDSIYVSLSSGNKIDVQ 1211 >UniRef50_B0JIB9 ATP-dependent Clp protease ATPase subunit n=11 Tax=cellular organisms RepID=B0JIB9_MICAN Length = 795 Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust. Identities = 179/338 (52%), Positives = 243/338 (71%), Gaps = 12/338 (3%) Query: 531 VTDAE-IAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA 589 V DAE IA+++A WTGIPV+++ E+E E LL +E +LH R+IGQ EAV+AVS AIRR+R Sbjct: 437 VVDAEEIAQIVAAWTGIPVTQLTETESESLLNLECQLHERIIGQQEAVNAVSRAIRRARV 496 Query: 590 GLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGA 649 L +PNRPI SF+F GPTGVGKTEL KALA +F S+ +M+R+DMSEFME H+VS+L+GA Sbjct: 497 NLKNPNRPIASFIFAGPTGVGKTELTKALAKLLFGSESSMIRLDMSEFMESHTVSKLIGA 556 Query: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709 PPGY+GY EGG LTEAVRR+PY V+L DE+EKAHPDVFN+LLQ+L+DG LTD QGR VDF Sbjct: 557 PPGYIGYNEGGQLTEAVRRQPYRVVLFDEIEKAHPDVFNLLLQLLEDGHLTDSQGRRVDF 616 Query: 710 RNTVVIMTSNLGSDLIQ-----------ERFGELDYAHMKELVLGVVSHNFRPEFINRID 758 +NT++IMTSN+GS +I+ + F + Y + V + FRPEF+NR+D Sbjct: 617 KNTLIIMTSNIGSKVIEKGGNSLGFEIADDFAQSRYQQISNRVTEELKQYFRPEFLNRLD 676 Query: 759 EVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLK 818 E++VF L + + IA I + L K+L E+G + ++ L+ GYDP YGARPL+ Sbjct: 677 EIIVFRQLTREEVTQIADILIADLAKQLTEKGISVEVTAAFKDLVINEGYDPSYGARPLR 736 Query: 819 RAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAV 856 RA+ +++E+ LA +LSG++ G L+V + +V V Sbjct: 737 RALTRRLEDSLAVAMLSGKVNSGDHAILDVTAEAVVTV 774 Score = 326 bits (836), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 172/321 (53%), Positives = 226/321 (70%), Gaps = 18/321 (5%) Query: 98 AQKRGDNFISSELFVLAALESRGTLA---------DILKAAGATTANITQAIEQMRGGES 148 A++ G+N I++E +LA +LA D++K G N A E++ G Sbjct: 95 ARQLGENAIATEHLLLAITSDPESLAAKILIMQGVDLIKLRGLLIKN---AGEKVASGRF 151 Query: 149 VNDQGAEDQRQA-----LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPV 203 EDQ+ A L +Y +L + + GK+DPVIGR+ EI R +Q+L RRTK+NP+ Sbjct: 152 TAKSDYEDQKNAPQGGILAQYGRNLNQEVKNGKIDPVIGREPEIERVVQILGRRTKSNPI 211 Query: 204 LIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVL 263 L+GEPGVGKTAI EGLAQRI NG++PE L+ ++V+ALDMG+L+AG ++RG+FEERLKG++ Sbjct: 212 LLGEPGVGKTAIAEGLAQRIHNGDIPELLQDKQVIALDMGSLLAGTRFRGDFEERLKGIV 271 Query: 264 NDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYI 323 ++ ++ GN+ILFIDE+HT+VGAG GAMDA N+LKPALARGEL C+GATTLDEY+++I Sbjct: 272 EEV-RKSGNIILFIDEIHTLVGAGSMGGAMDASNLLKPALARGELQCLGATTLDEYKRHI 330 Query: 324 EKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIAD 383 E+DAALERRFQ V V EP+ E I ILRGLK YE H V+ AI AA LS RYI D Sbjct: 331 ERDAALERRFQPVMVGEPTKEQAIEILRGLKATYEDFHQVKYDQKAIEAAVNLSSRYIND 390 Query: 384 RQLPDKAIDLIDEAASSIRMQ 404 R LPDKAIDL+DEA S ++ Sbjct: 391 RFLPDKAIDLLDEAGSRTHLR 411 >UniRef50_C4YJT6 Heat shock protein 78, mitochondrial n=1 Tax=Candida albicans RepID=C4YJT6_CANAL Length = 700 Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust. Identities = 177/293 (60%), Positives = 237/293 (80%) Query: 156 DQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAI 215 D R AL+K+ DLT+ A++GKLDPVIGRD EIRRTIQ+L RRTKNNPVLIG G GKTA+ Sbjct: 83 DNRPALEKFGSDLTQLAKEGKLDPVIGRDHEIRRTIQILSRRTKNNPVLIGNAGTGKTAV 142 Query: 216 VEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVIL 275 +EGLAQRII GEVP+ +K ++++ LD+ +++GAKYRG+FE +LK +L ++ ++ GNVIL Sbjct: 143 MEGLAQRIIRGEVPDSMKDKQIITLDLAGIISGAKYRGDFESKLKSILKEVEEKNGNVIL 202 Query: 276 FIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQK 335 FIDE H ++G GKA+G++DA N+LKPALARG+L GATT++EYR+Y+EKDAAL RRF Sbjct: 203 FIDEFHLLMGLGKAEGSIDASNLLKPALARGKLSMCGATTIEEYRKYVEKDAALARRFSP 262 Query: 336 VFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLID 395 V V EP+VEDTI+ILRGLKERYE+HH V+I D A+V AA S+RYI DR LPDKAIDL+D Sbjct: 263 VTVNEPTVEDTISILRGLKERYEVHHGVRIMDSALVTAALYSNRYITDRFLPDKAIDLVD 322 Query: 396 EAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEEL 448 EA+S++R+Q +S+P+ + LDR+I+ +++E ++L KE D+ S R L +EL Sbjct: 323 EASSTLRLQHESRPDAIATLDRQIMTIEIELESLRKEEDQLSIDRKHKLEKEL 375 Score = 326 bits (835), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 153/315 (48%), Positives = 223/315 (70%), Gaps = 4/315 (1%) Query: 546 IPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLG 605 + + R + E+E L M L V+GQ+EA+DAVS+A+R RAGL NRPI SF+FLG Sbjct: 363 LSIDRKHKLEKELELDMNILLRQSVVGQDEAIDAVSDAVRLQRAGLTSENRPIASFMFLG 422 Query: 606 PTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEA 665 PTG GKTEL K+LA F+F+ A+VR DMSEF EKH++SRL+G+PPGYVGYEE G LTEA Sbjct: 423 PTGTGKTELTKSLAQFLFNDKNAVVRFDMSEFQEKHTISRLIGSPPGYVGYEESGELTEA 482 Query: 666 VRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLI 725 VRR+PYSV+L DE EKAHPD+ +LLQVLD+G LTD G+ +DF+NT+++MTSN+G +++ Sbjct: 483 VRRKPYSVVLFDEFEKAHPDLSKLLLQVLDEGSLTDSHGKKIDFKNTIIVMTSNIGQEIL 542 Query: 726 QERFGELDYAHM----KELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKR 781 + H+ K VL + H++ PEF+NRID++VVF+ L + + I I+L+ Sbjct: 543 LADKNTYEDGHINSEVKSQVLENLRHHYAPEFLNRIDDIVVFNRLSKTALKEILDIRLRE 602 Query: 782 LYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPG 841 + RL ++ + ++DEA LL + GYDP YGARPL R +++++ +PLA +++ G++ Sbjct: 603 IGDRLVDKRIILQLTDEAKTLLCDMGYDPTYGARPLNRVLRKKLLDPLAMRLIKGQVQEN 662 Query: 842 KVIRLEVNEDRIVAV 856 + +++EV + +I V Sbjct: 663 ETVKVEVKDHKIYVV 677 >UniRef50_Q93ZM4 AT3g48870/T21J18_140 n=31 Tax=cellular organisms RepID=Q93ZM4_ARATH Length = 558 Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust. Identities = 211/449 (46%), Positives = 294/449 (65%), Gaps = 27/449 (6%) Query: 3 LDRLTNKF--QLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 +R T K + L+ ++ LGH+ F+ ++ L+ + G + +L S GIN Sbjct: 115 FERFTEKAIKVIMLSQEEARRLGHN--FVGTEQILLGLIGEGTGIAAKVLKSMGINLKDS 172 Query: 61 RTDINQALNRLPQVEGTGG---DVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALE 117 R ++ + + R G+G ++ + RVL L + A++ G N+I SE +L L Sbjct: 173 RVEVEKIIGR-----GSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLR 227 Query: 118 SRGTLAD-ILKAAGATTANITQAIEQMRG------GESVNDQGAEDQRQALKKYTIDLTE 170 +A +L+ GA +NI + +M G + L++Y +LT+ Sbjct: 228 EGEGVAARVLENLGADPSNIRTQVIRMVGENNEVTASVGGGSSGNSKMPTLEEYGTNLTK 287 Query: 171 RAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPE 230 AE+GKLDPV+GR +I R +Q+L RRTKNNP LIGEPGVGKTAI EGLAQRI +G+VPE Sbjct: 288 LAEEGKLDPVVGRQPQIERVVQILARRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPE 347 Query: 231 GLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKAD 290 ++G+ V+ LDMG LVAG KYRGEFEERLK ++ ++ +Q +ILFIDE+HT++GAG A+ Sbjct: 348 TIEGKTVITLDMGLLVAGTKYRGEFEERLKKLMEEI-RQSDEIILFIDEVHTLIGAGAAE 406 Query: 291 GAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAIL 350 GA+DA N+LKPALARGEL C+GATT+DEYR++IEKD ALERRFQ V V EP+VE I IL Sbjct: 407 GAIDAANILKPALARGELQCIGATTIDEYRKHIEKDPALERRFQPVKVPEPTVEGAIQIL 466 Query: 351 RGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPE 410 +GL+ERYE+HH ++ TD A+VAAA LSH+YI+DR LPDKAIDLIDEA S +R++ PE Sbjct: 467 QGLRERYEIHHKLRYTDEALVAAAQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPE 526 Query: 411 ELDRLDRRIIQLKLEQQALMKESDEASKK 439 E L++++ Q + KE +EA +K Sbjct: 527 EARELEKQLRQ-------ITKEKNEAVRK 548 >UniRef50_A4W448 ATPases with chaperone activity, ATP-binding subunit n=73 Tax=Streptococcus RepID=A4W448_STRS2 Length = 817 Score = 366 bits (940), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 189/398 (47%), Positives = 270/398 (67%), Gaps = 21/398 (5%) Query: 465 EKASLSGTQTIKAELEQAKI-AIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKT 523 ++AS + K ++E+ + A++QA G +++L L K EA Q + Sbjct: 424 DEASATVQNRAKGQVEEGGLTALDQALMAGKYKTVTQL-------LLKAQEAENQATSYS 476 Query: 524 MRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNA 583 + +VT+ +I L+R +GIPV+++ +++ +K L +EQELH RVIGQ EA+ AVS A Sbjct: 477 L-----EVTEEDILATLSRLSGIPVTKLSQTDAKKYLNLEQELHKRVIGQEEAISAVSRA 531 Query: 584 IRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSV 643 IRR+++G+ +RP GSF+FLGPTGVGKTEL KALA +FD + A++R DMSE+MEK + Sbjct: 532 IRRNQSGIRTGHRPSGSFMFLGPTGVGKTELAKALAEILFDDESALIRFDMSEYMEKFAA 591 Query: 644 SRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQ 703 SRL GAPPGYVGYEEGG LTE VR +PYSV+L DE+EKAHPD+FN+LLQVLDDG LTD + Sbjct: 592 SRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDELEKAHPDIFNVLLQVLDDGVLTDRK 651 Query: 704 GRTVDFRNTVVIMTSNLGSDLIQER----FGELDYA----HMKELVLGVVSHNFRPEFIN 755 GR VDF NTV+IMTSNLG+ +++ FG LD + H+++ + + +RPEFIN Sbjct: 652 GRKVDFSNTVIIMTSNLGATALRDDKTVGFGALDLSKSQEHVEKRIFEALKKAYRPEFIN 711 Query: 756 RIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGAR 815 RIDE VVFH L E + + ++ +K L +G + + ALKLL++ GYDP GAR Sbjct: 712 RIDEKVVFHSLTEADMQDVVKVMVKPLIAVAASKGITLKLQASALKLLAKEGYDPEMGAR 771 Query: 816 PLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRI 853 PL+R +Q ++E+PLA+ +L GEL G +++ V +++ Sbjct: 772 PLRRLLQTKLEDPLAEMLLRGELPAGVTLKVGVKAEQL 809 Score = 298 bits (763), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 187/484 (38%), Positives = 279/484 (57%), Gaps = 41/484 (8%) Query: 5 RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDI 64 +++ Q DAQ +A + + ++E HL+ A + +L + + Sbjct: 2 KISRGLQGVYEDAQLIAQRYSSDYLETWHLLLAFVINPDTVAGAILAEYPADVLDYERAV 61 Query: 65 NQALNRLPQVEGTGGDVQPSQDLVRVLN-LCDKLAQKRGDNFISSE-LFVLAALESRGTL 122 + R E PS V+ L +K+A+ + +E +F+ L+ R T Sbjct: 62 YMVMGRRYHEELESFFFLPSSKRVKELQVFAEKIAEIVKSKGLGTEHIFMGMLLDKRSTA 121 Query: 123 ADI-----------------------LKAAGATTANITQAIEQM-RGGE----SVNDQGA 154 + I L+A T +AI M +GG+ +V + Sbjct: 122 SQILDQVGFHFEDSDDKVRFLDLRKNLEAKAGFTKEHLKAIRTMTKGGKPKQATVGNMMG 181 Query: 155 EDQRQA--LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGK 212 Q Q+ L+ YT DLT A G+L+PVIGRDEEI R +Q+L R+TKNNPVL+G+ GVGK Sbjct: 182 MTQSQSGGLEDYTRDLTALARSGQLEPVIGRDEEISRMLQILSRKTKNNPVLVGDAGVGK 241 Query: 213 TAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGN 272 TA+ GLAQRI NGEVP L R+L LD+ ++AG ++RG+FEER+ ++ND+ +++G Sbjct: 242 TALALGLAQRIANGEVPASLVNMRILELDLMNVIAGTRFRGDFEERMNNIINDI-EEDGR 300 Query: 273 VILFIDELHTMVGAGKA-DGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALER 331 VILFIDELHT++G+G D +DA N+LKPAL+RG L VGATT DEY+++IEKDAAL R Sbjct: 301 VILFIDELHTIMGSGSGIDSILDAANILKPALSRGTLRTVGATTQDEYQKHIEKDAALVR 360 Query: 332 RFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAI 391 RF KV + EPSV D++AIL+GLK YE HH V I+D A+V A + RY+ + LPD AI Sbjct: 361 RFAKVTIEEPSVADSVAILQGLKPAYEAHHKVTISDQAVVTAVAYAKRYLTSKNLPDSAI 420 Query: 392 DLIDEAASSIRMQIDSKPEE--LDRLDRRII--QLKLEQQALMKES---DEASKKRLDML 444 DL+DEA+++++ + + EE L LD+ ++ + K Q L+K ++A+ L++ Sbjct: 421 DLLDEASATVQNRAKGQVEEGGLTALDQALMAGKYKTVTQLLLKAQEAENQATSYSLEVT 480 Query: 445 NEEL 448 E++ Sbjct: 481 EEDI 484 >UniRef50_C1ASB5 Putative ATP-dependent Clp protease ATP-binding subunit n=1 Tax=Rhodococcus opacus B4 RepID=C1ASB5_RHOOB Length = 748 Score = 365 bits (938), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 205/417 (49%), Positives = 270/417 (64%), Gaps = 37/417 (8%) Query: 12 LALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQALNR- 70 L A AQS+ + P H++ ALL+Q+ V P+ + G++A LR R Sbjct: 13 LDWAQAQSIPVA-----TRPEHVLMALLDQDATIVEPVFEALGVDADDLRRSSPSVTVRR 67 Query: 71 -------LPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLA 123 P ++ D+ +L + A++ D+ +S E ++A R + Sbjct: 68 GAAASAAAPGIDA---------DMASLLRAAEHEARQLSDHLVSIEHLLIALAGRRDGVG 118 Query: 124 DILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALK-------------KYTIDLTE 170 + L+AAGA +++ +A+ ++RG +V D AE +R L +Y+ DLTE Sbjct: 119 EALRAAGADRSSMLEAVRRVRGPAAVVD--AEPERTYLGVRWRPPAVSSQVLRYSRDLTE 176 Query: 171 RAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPE 230 A + +LDPV+GRD EI R IQVL RR KNNPVLIG+PGVGKTAI EGLAQRI+ G+VP Sbjct: 177 LAFRAELDPVVGRDAEIERVIQVLSRRRKNNPVLIGDPGVGKTAIAEGLAQRIVAGDVPA 236 Query: 231 GLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKAD 290 L RRV+ALD+GALVAGA YRGEFE+R+K +L D+ +G +I+FIDELHT+VGAG A+ Sbjct: 237 ALLNRRVIALDVGALVAGATYRGEFEDRVKSLLKDVVGADGGIIVFIDELHTIVGAGAAE 296 Query: 291 GAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAIL 350 GA+DAGN+LKP LARGE +GATTLDEYR+++E D ALERRFQ V V EPS + + +L Sbjct: 297 GAVDAGNLLKPMLARGEFRTLGATTLDEYRKHVESDGALERRFQPVRVDEPSSANALEML 356 Query: 351 RGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDS 407 RGL+ RYE HH V ITD A+ AA +LS RYIADR LPDKAIDLIDEA S R+Q DS Sbjct: 357 RGLRSRYESHHGVAITDAALSAAVSLSDRYIADRFLPDKAIDLIDEACSRRRIQSDS 413 Score = 325 bits (834), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 158/317 (49%), Positives = 219/317 (69%), Gaps = 19/317 (5%) Query: 531 VTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590 V D +IA ++ +WTGIPVSR+ E E E+L+ ME L RV+GQ +AV VS A+R SR G Sbjct: 429 VDDDDIARLVGQWTGIPVSRLQEEELERLVHMEHRLAERVVGQAKAVVGVSAALRNSRTG 488 Query: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAP 650 L+DPNRPI S +F GP GVGKT L + LA+ M DS EA+V++DMS++ EKHSV+RLVGA Sbjct: 489 LSDPNRPIASLMFCGPLGVGKTYLARVLADVMLDSGEALVQLDMSDYAEKHSVTRLVGAS 548 Query: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFR 710 PGYVGYEEGG LT+AVRRRPY V+LLD++E+AHPDV +L QV+DDG LTDGQGR V FR Sbjct: 549 PGYVGYEEGGQLTDAVRRRPYCVVLLDDIEQAHPDVHGLLRQVIDDGSLTDGQGRVVSFR 608 Query: 711 NTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQH 770 + +++MTS+L LG V+ +FR EF+ R+D+V+ F PL + Sbjct: 609 HVILVMTSSLPD-------------------LGAVNQHFRAEFLTRLDDVLEFAPLRRKD 649 Query: 771 IASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLA 830 + + IQ++ + RL +RG + ++ EA L++E G D GARPL R +Q+++ + ++ Sbjct: 650 LEQLVDIQVRSVAARLSDRGIALELTHEARALIAELGDDSRQGARPLVRVVQKELISAVS 709 Query: 831 QQILSGELVPGKVIRLE 847 + IL G+ PG IR++ Sbjct: 710 RSILLGDACPGDTIRVD 726 >UniRef50_A3CMZ1 ATPases with chaperone activity, ATP-binding subunit, putative n=1 Tax=Streptococcus sanguinis SK36 RepID=A3CMZ1_STRSV Length = 747 Score = 362 bits (930), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 172/309 (55%), Positives = 237/309 (76%), Gaps = 2/309 (0%) Query: 528 RNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRS 587 R V+ +IA ++ R TGI V +M++ERE LL +++ L R++GQ++AV VS AI RS Sbjct: 414 RPDVSREDIASIVERITGIKVQGIMDNEREHLLNLDKLLRQRIVGQDQAVQKVSEAILRS 473 Query: 588 RAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLV 647 RAG+ +P RPIGSFLFLGPTGVGKT L KALA +F ++ MVR+DMSE+MEKH+V+RLV Sbjct: 474 RAGIQNPKRPIGSFLFLGPTGVGKTALAKALAERLFGNELEMVRLDMSEYMEKHAVARLV 533 Query: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTV 707 G PPGYVG+EEGG LTEAVRRR YS++LLDE+EKAHPDVFN LLQVLD+GRLTD +GRT+ Sbjct: 534 GPPPGYVGFEEGGQLTEAVRRRLYSIVLLDEIEKAHPDVFNTLLQVLDEGRLTDSKGRTI 593 Query: 708 DFRNTVVIMTSNLGSDLIQERFGELD--YAHMKELVLGVVSHNFRPEFINRIDEVVVFHP 765 DF+NT++IMTSN+GS I E A +E VL ++ H+F+PEF+NRIDE VVF+P Sbjct: 594 DFKNTILIMTSNIGSQQILESLKSEQGLTAETQEEVLSLLQHSFKPEFLNRIDETVVFNP 653 Query: 766 LGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQI 825 L + + +I +I +++L +RLE + ++H+S+E L++ GY P +GARP++R+I + + Sbjct: 654 LRAEDMINIVKIMVRQLQERLEHQKIQLHLSEEVYAFLAQKGYQPEFGARPIQRSIMRYL 713 Query: 826 ENPLAQQIL 834 E PLA+ ++ Sbjct: 714 ETPLARYLV 722 Score = 271 bits (693), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 151/406 (37%), Positives = 239/406 (58%), Gaps = 5/406 (1%) Query: 4 DRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTD 63 + TN Q L A+ LA+ N ++ H+ + L + ++ T ++ + + Sbjct: 3 EHYTNLLQEVLNAAKELAIQKHNYQVDIPHVWTVLTQPQAFALE-FYTGLDLDINEFISV 61 Query: 64 INQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRG---DNFISSELFVLAAL-ESR 119 INQ L ++P T + Q R+ NL D +R D ++ E +L+ + R Sbjct: 62 INQELAKIPVFSHTDTNRYGRQYSQRLKNLLDDAEAERAELRDEVVTVEHLILSLFHQQR 121 Query: 120 GTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDP 179 + LK AG + + + R G+ E + QAL KY + + Sbjct: 122 NPITVFLKQAGIDKELVAAKLNKARQGKRAISPSQESRYQALSKYATNFNQWLADQTDRQ 181 Query: 180 VIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLA 239 VIGR +EI I+VL R+ K+N +L+G PGVGK+ ++EG+ R++ +VPE L G+ V Sbjct: 182 VIGRKDEIDDIIRVLCRKEKSNAILLGFPGVGKSKVIEGVVGRLLADDVPEHLLGKEVFK 241 Query: 240 LDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNML 299 L++G L+AG KYRGEFEER K VL+++ +G +IL+I+++H +V AG+ +G++DAGN+L Sbjct: 242 LNLGGLIAGTKYRGEFEERFKAVLDEVLVAKGKIILYIEDIHQIVTAGRTEGSLDAGNLL 301 Query: 300 KPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYEL 359 KP LA+G+++ +G TT YR+ E D ALE RFQ+V + EP + +AIL+GL+E Y+ Sbjct: 302 KPLLAQGQINIIGTTTFAAYRESFELDQALEGRFQRVRIEEPDQDKALAILQGLRENYQD 361 Query: 360 HHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQI 405 H V++TD A+ AA +LS RY++DR LPDKA+DLIDEA + ++Q+ Sbjct: 362 FHGVRLTDEALQAAISLSIRYLSDRYLPDKALDLIDEACAVKKIQL 407 >UniRef50_A7HJU2 ATPase AAA-2 domain protein n=4 Tax=Thermotogaceae RepID=A7HJU2_FERNB Length = 741 Score = 361 bits (927), Expect = 6e-98, Method: Compositional matrix adjust. Identities = 175/325 (53%), Positives = 239/325 (73%), Gaps = 10/325 (3%) Query: 528 RNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRS 587 + ++ + +IA V+ RWTGIPV ++M E+EK+ +E+ +H + + Q EAV VSNAI+ S Sbjct: 409 KKEIVEEDIASVIERWTGIPVGKIMGDEKEKIKNLEKIIHEKFVDQEEAVKIVSNAIKMS 468 Query: 588 RAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLV 647 RAG+ +P RP+G FLFLGPTGVGKTEL K LA+ +F S++A++RIDMSE+MEKHSV+RL+ Sbjct: 469 RAGIRNPKRPLGVFLFLGPTGVGKTELAKRLADVLFGSEKALIRIDMSEYMEKHSVARLI 528 Query: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTV 707 GAPPGYVGYEEGG LTE VRRRPYSV+L DE+EKAHP+VFN+LLQ+ DDGRLTDG+G TV Sbjct: 529 GAPPGYVGYEEGGQLTEQVRRRPYSVVLFDEIEKAHPEVFNVLLQLFDDGRLTDGKGTTV 588 Query: 708 DFRNTVVIMTSNLGSDL----IQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVF 763 DFRNT++IMTSN+GSD+ I+E F +L H++E + FRPE INRID VVF Sbjct: 589 DFRNTIIIMTSNIGSDVIMQDIEEGFEDLIPRHIEE----EMRKYFRPELINRIDAAVVF 644 Query: 764 HPLGEQHIASIAQIQLKRLYKRLEERGYEIHIS-DEALK-LLSENGYDPVYGARPLKRAI 821 PL ++HI I +I K L +RL + +I + DE+++ L+ GY P GARPL+R Sbjct: 645 KPLKKEHIKEIIEIYTKELNERLIDSDKDIKVVLDESMREYLATEGYVPSMGARPLRRLF 704 Query: 822 QQQIENPLAQQILSGELVPGKVIRL 846 + +E LA+ I+ ++ G+ ++ Sbjct: 705 ENTVEFKLAELIIDEKVKEGQTVKF 729 Score = 341 bits (875), Expect = 6e-92, Method: Compositional matrix adjust. Identities = 184/385 (47%), Positives = 259/385 (67%), Gaps = 11/385 (2%) Query: 31 PLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQALNRLPQVEGT----GGDVQPSQD 86 P H++ +L + +LT ++ LR D+ + ++ + + + D Sbjct: 33 PEHILLTMLENTKTAAVDILTFLNVDTDALRRDVERIISSKGGYYYSGSGGTNQIYITPD 92 Query: 87 LVRVLNLCDKLAQKRGDNFISSELFVLA-ALESRGTLADILKAAGATTANITQAIEQMRG 145 +V+N + A++ GD + ++ +LA A+ T +L G T + AI+Q+R Sbjct: 93 TTKVINEAKREAKRMGDEKVGTDHLLLAMAIVPETTTYRLLSKYGVTQDALYSAIKQLRM 152 Query: 146 GESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLI 205 + ++ E+ L K+T +LTE A+ G+L PV+GR+ EI R I++L R+ KNNPVLI Sbjct: 153 QRTYSE---EENIDILAKFTENLTEMAKNGQLMPVVGRENEINRMIEILGRKIKNNPVLI 209 Query: 206 GEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLND 265 G+PGVGKTAIVEGLAQRI+N +VPE LK + +L LD+ LVAG K+RGEFEERLK ++ D Sbjct: 210 GDPGVGKTAIVEGLAQRIVNKDVPEFLKNKTILKLDLARLVAGTKFRGEFEERLKKLI-D 268 Query: 266 LAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEK 325 + K+ +VILFIDELHT+VGAG A+GA+DAGN+LKP LARG L +GATT++EYR++IEK Sbjct: 269 VLKKRTDVILFIDELHTVVGAGAAEGALDAGNILKPELARGTLRVIGATTVEEYRKHIEK 328 Query: 326 DAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQ 385 D AL RRFQ +FV EPS+E+TI IL+GLK ++E H+V I+D AI AA +S RYI DR Sbjct: 329 DKALARRFQVIFVPEPSIEETIEILKGLKAKFEEFHNVSISDKAIEFAAKMSARYITDRF 388 Query: 386 LPDKAIDLIDEAASSIRMQIDSKPE 410 LPDKA+DL+DEAA+ R +ID K E Sbjct: 389 LPDKAVDLVDEAAA--RAKIDGKKE 411 >UniRef50_A8MFR5 ATPase AAA-2 domain protein n=3 Tax=Clostridiales RepID=A8MFR5_ALKOO Length = 758 Score = 360 bits (923), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 169/329 (51%), Positives = 238/329 (72%), Gaps = 3/329 (0%) Query: 528 RNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRS 587 ++ +T ++A V+ WT IPV ++ E E +LL +E++LH RV+GQ +AV ++S IRR+ Sbjct: 428 KSALTVEDVAFVIESWTNIPVGKITEEEASRLLSLEEQLHRRVVGQKDAVRSLSRTIRRN 487 Query: 588 RAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLV 647 R+G +P SF+F+GPTGVGKTEL +ALA +F S+EAM+R+DMSE+MEKH+VS+L+ Sbjct: 488 RSGFRKKRKP-ASFIFVGPTGVGKTELVRALAEELFGSEEAMIRVDMSEYMEKHTVSKLI 546 Query: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTV 707 GAPPGYVGY++GG LT+ VRR+PYSVILLDE+EKAHPDVFN+LLQ+L+DGRLTD QGRTV Sbjct: 547 GAPPGYVGYDQGGQLTDKVRRKPYSVILLDEIEKAHPDVFNMLLQILEDGRLTDSQGRTV 606 Query: 708 DFRNTVVIMTSNLGSDLIQER--FGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHP 765 F NTVVIMTSN G+ + FG Y ++ + FRPEF+NR+DE +VF Sbjct: 607 HFENTVVIMTSNAGTQIKSGSMGFGNRGYEALENRAKDALKETFRPEFLNRVDETIVFTQ 666 Query: 766 LGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQI 825 L ++ + I ++ LK + + ++E+G I ISD + E GYD YGARPL+R IQ+ I Sbjct: 667 LSKEELREIIELMLKDVIEDVKEKGMTITISDAVKDFILEKGYDEKYGARPLRRVIQRSI 726 Query: 826 ENPLAQQILSGELVPGKVIRLEVNEDRIV 854 E+ +A++ + VPG I++++ EDR+V Sbjct: 727 EDEIAEEYIKNTFVPGDHIQVDLKEDRVV 755 Score = 291 bits (746), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 143/245 (58%), Positives = 188/245 (76%), Gaps = 2/245 (0%) Query: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220 L Y +LT+RA ++D VIGR++EI R +Q+L RR+KNNP+LIGEPGVGKTAI EGLA Sbjct: 129 LDTYGTNLTDRARNKEIDRVIGRNKEIDRVVQILNRRSKNNPILIGEPGVGKTAIAEGLA 188 Query: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280 RI+ +VP L V LD+ A+VAG ++RG+FE R+K ++ + A++ GN+IL IDE+ Sbjct: 189 GRIVEKQVPAKLFNAEVYLLDLTAIVAGTQFRGQFEGRMKAIIEE-AQECGNIILVIDEV 247 Query: 281 HTMVGAGKADGA-MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVA 339 H ++GAG+ G M+A N+LKPALARGE+ +GATTLDEYR++IEKD+ALERRFQ V V Sbjct: 248 HNIMGAGEVHGGVMNAANILKPALARGEIQVIGATTLDEYRKHIEKDSALERRFQPVLVE 307 Query: 340 EPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAAS 399 EPSVEDTI IL+G+K YE +H V+I+D I AAA +S RYI DR LPDKAID+IDEA S Sbjct: 308 EPSVEDTIEILKGIKGYYEDYHKVKISDEVIEAAAKMSERYITDRYLPDKAIDIIDEAGS 367 Query: 400 SIRMQ 404 + ++ Sbjct: 368 RVNLR 372 >UniRef50_A4FG52 Clp protease ATP binding subunit n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FG52_SACEN Length = 768 Score = 357 bits (916), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 176/324 (54%), Positives = 242/324 (74%), Gaps = 3/324 (0%) Query: 535 EIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADP 594 ++A+V++R TGIPVS + +++++LL +E+ L +VIGQ+ AV +V+ A+RR+RAGLADP Sbjct: 427 DVADVVSRRTGIPVSDLTAADKQRLLGLEKVLRSKVIGQDAAVRSVAEAVRRARAGLADP 486 Query: 595 NRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYV 654 RPIGSFLFLGPTGVGKTEL +ALA +F + ++R DM EF EKH+VSRL+GAPPGYV Sbjct: 487 ERPIGSFLFLGPTGVGKTELARALARALFGDAQRLIRFDMGEFQEKHTVSRLIGAPPGYV 546 Query: 655 GYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVV 714 GY E G LT+ VRR+PYSV+LLDEVEKAHPDVFN LLQ+LD+GRL+D QGR+VDFRN VV Sbjct: 547 GYGESGQLTDRVRRQPYSVLLLDEVEKAHPDVFNTLLQLLDEGRLSDAQGRSVDFRNVVV 606 Query: 715 IMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASI 774 IMTSN+G+D I + G + ++ +L + FRPEFINRID+V VF PLG + I Sbjct: 607 IMTSNIGADRILDAGGSAGDSALE--LLEELRSFFRPEFINRIDDVTVFQPLGPAALREI 664 Query: 775 AQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQIL 834 + L+R Y++L RG + +++ A+ L+E G+ P +GARPL+R IQ++++N LA ++ Sbjct: 665 TGLLLERTYQQLLARGIGMEVTEAAVAWLAERGHQPEFGARPLRRVIQRELDNRLAAMVI 724 Query: 835 SGELVPG-KVIRLEVNEDRIVAVQ 857 GEL G +V+ V ED ++ V Sbjct: 725 DGELSSGHRVLVDAVGEDLVLEVS 748 Score = 333 bits (855), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 154/251 (61%), Positives = 202/251 (80%) Query: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220 L ++ +D+TE A G+LDPV+GR +E+ + ++VL RRTKNNPV IG+PGVGKTAIVEGLA Sbjct: 162 LDEFGMDMTELARAGRLDPVVGRSQEVEQAVEVLGRRTKNNPVFIGDPGVGKTAIVEGLA 221 Query: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280 QRI++G VP L GRRV++LD+ +VAGAKYRGEFE+R + ++N++ + V++FIDE+ Sbjct: 222 QRIVDGAVPWSLAGRRVVSLDLAGMVAGAKYRGEFEQRFRDLMNEIRQHRDEVLVFIDEI 281 Query: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340 H +VGAG +G MDAG MLKPALARGE+ VGATT++EYR++IEKD ALERRFQ + VAE Sbjct: 282 HGIVGAGAGEGTMDAGTMLKPALARGEVQVVGATTVEEYRKHIEKDPALERRFQPILVAE 341 Query: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400 PSV DT+A+LRGL++RY+LHH V I D A+VAAA LS RYIADR LPDKA+DL+D+A S Sbjct: 342 PSVGDTVAVLRGLRDRYQLHHRVVIADDALVAAARLSQRYIADRFLPDKAVDLLDQACSR 401 Query: 401 IRMQIDSKPEE 411 +R+ P + Sbjct: 402 VRLLRGGSPND 412 >UniRef50_Q025Q2 ATPase AAA-2 domain protein n=12 Tax=Bacteria RepID=Q025Q2_SOLUE Length = 823 Score = 356 bits (914), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 175/338 (51%), Positives = 245/338 (72%), Gaps = 19/338 (5%) Query: 520 EGKTMRLLRNK----------VTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHR 569 E + MRLLR K VT +I +V+ARWTG+P++ + E E KLLR+E+ELH R Sbjct: 443 ERENMRLLREKYNLDDSSTGCVTKDDIEDVVARWTGVPMTSIKEEEIAKLLRIEEELHKR 502 Query: 570 VIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAM 629 VI Q +A+ A++ AIRRSRAGL NRP GSFLFLGPTGVGKTE+ +ALA F+F S++++ Sbjct: 503 VISQEKAISALARAIRRSRAGLKASNRPAGSFLFLGPTGVGKTEVARALAGFLFGSEKSL 562 Query: 630 VRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNI 689 VR DMSE+MEKHSVS+L+G+PPGYVGYEEGG LTE V+R PYS+ILLDE+EKAHPD++NI Sbjct: 563 VRFDMSEYMEKHSVSKLIGSPPGYVGYEEGGQLTERVKRNPYSIILLDEIEKAHPDIYNI 622 Query: 690 LLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQER--------FGELDYAHMKELV 741 LLQV +DG+LTDG G VDF+NT++IMTSNLG+ +++R GE ++++V Sbjct: 623 LLQVFEDGQLTDGLGNQVDFKNTIIIMTSNLGARFLEKRGNLGFSIPAGEAGSTKVEDMV 682 Query: 742 LGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALK 801 V F PEF+NR+DEV++F L + + I ++ ++++ L + +IH++ +A K Sbjct: 683 RSEVKKAFNPEFLNRLDEVILFMSLTDPDLIQIMELLVQQVNVNLVAKQVKIHLAPDAAK 742 Query: 802 -LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGEL 838 +L + D YGARPL+RA+Q+ IE+PL++ ++ G L Sbjct: 743 YILEKTCADRSYGARPLRRALQKYIEDPLSEALIQGTL 780 Score = 318 bits (816), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 186/419 (44%), Positives = 262/419 (62%), Gaps = 8/419 (1%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTS-AGINAGQLR 61 +R T K + + A+ A + +IE HL+ LL ++ + L S A + + +R Sbjct: 2 FERYTEKARRVIFFARYEASQFGSPYIETEHLLLGLLREDKALANRFLRSHAAVES--IR 59 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL-ESRG 120 I + + + T D+ S + RVL + A++ I +E +L L E + Sbjct: 60 KQI-EGHTTIREKVSTSVDLPLSHECKRVLAYGAEEAERLSHKHIGTEHLLLGLLREEKC 118 Query: 121 TLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPV 180 A+IL G + I + + + + + + + E L +++ DLT+ A LDP+ Sbjct: 119 FAAEILHERGLRLSTIREELARSQSEKVASARPKESS--LLAEFSRDLTQAAMDNTLDPL 176 Query: 181 IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL 240 IGRD E+ R +Q+L RRTKNNPVLIGEPGVGKTAIVEGLAQRI G+VP L +R+LAL Sbjct: 177 IGRDYELERVVQILCRRTKNNPVLIGEPGVGKTAIVEGLAQRIAEGDVPSFLADKRILAL 236 Query: 241 DMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLK 300 D+ +VAG KYRG+FEERLK ++ +L + + N I+FIDELHT+VGAG A+G++DA N+LK Sbjct: 237 DLSLIVAGTKYRGQFEERLKTIMKELMENQ-NAIIFIDELHTLVGAGSAEGSLDAANILK 295 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELH 360 PAL+RGE+ C+GATT E+R+ IEKD +LERRFQ V V P+ D I IL G+K+RYE Sbjct: 296 PALSRGEIQCIGATTPAEFRKSIEKDRSLERRFQAVKVPPPNESDAIKILFGIKDRYEKF 355 Query: 361 HHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRI 419 H V TD AI AA S RYI DR LPDKAIDLIDEA + ++++ + P +L + +RI Sbjct: 356 HAVAYTDDAIEAAVYTSSRYIPDRYLPDKAIDLIDEAGARVKLRQTTLPADLADIQKRI 414 >UniRef50_C4V0P0 ATPase with chaperone activity, ATP-binding subunit n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V0P0_9FIRM Length = 833 Score = 354 bits (909), Expect = 8e-96, Method: Compositional matrix adjust. Identities = 186/347 (53%), Positives = 251/347 (72%), Gaps = 13/347 (3%) Query: 508 ELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELH 567 EL +LEA+ + E + +VT+ +IA+V+A+WTGIPV R+ E ++LL +E + Sbjct: 457 ELHAKLEASRRSEDTRTEI---RVTENDIADVVAQWTGIPVQRIAAKESDRLLALETHIG 513 Query: 568 HRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDE 627 RVIGQ+EAV AV+ A+RR+RAG+ DP RPIGSFLFLG TGVGKTEL +ALA +F ++E Sbjct: 514 RRVIGQDEAVRAVARAVRRARAGVKDPRRPIGSFLFLGATGVGKTELARALAEAVFGTEE 573 Query: 628 AMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVF 687 A++R DMSE+MEKH+ +RLVGAPPGYVGYEEGG LT+AVRR+P+S+IL DEVEKAHPDVF Sbjct: 574 AIIRFDMSEYMEKHTTARLVGAPPGYVGYEEGGQLTDAVRRKPFSIILFDEVEKAHPDVF 633 Query: 688 NILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYA----------HM 737 ++LLQVL+DGRLTDGQGR DFRNT++IMTSN G+D ++ G + +A Sbjct: 634 HMLLQVLEDGRLTDGQGRVTDFRNTIIIMTSNAGADHLRSTRGTIGFAVGLQARADEEQA 693 Query: 738 KELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISD 797 K+ VL V FRPEF+NR+D+++VF+ LGE ++ I I L+ + RL E+ I +S Sbjct: 694 KKRVLEEVRKIFRPEFLNRVDDMIVFNALGEPELSKIVDILLRDVKVRLAEQKINIEVSP 753 Query: 798 EALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVI 844 A ++L G D +GARPL+RAIQ+ IE+ LA+ IL+ + G I Sbjct: 754 SAKRVLIAKGADVKFGARPLRRAIQKNIEDALAEHILARDFASGDSI 800 Score = 305 bits (781), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 164/307 (53%), Positives = 216/307 (70%), Gaps = 9/307 (2%) Query: 160 ALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGL 219 +LKKY DLT A G+LDPVIGR EI R IQ+L RRTKNNP+L+GE GVGKTAI EGL Sbjct: 171 SLKKYGTDLTAAAGGGELDPVIGRTAEIDRVIQILARRTKNNPLLLGEAGVGKTAIAEGL 230 Query: 220 AQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDE 279 A+RI GEVP L+ +R++ L M ALVAG KYRGEFEERLK V++D+ K + N+ILFIDE Sbjct: 231 ARRIAAGEVPFLLEDKRIVTLSMTALVAGTKYRGEFEERLKNVVDDVVKAK-NIILFIDE 289 Query: 280 LHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVA 339 +HT++ AG A+GA+DA N+LKPALARG++ +GATTL EY++Y KD AL RRFQ V V Sbjct: 290 IHTLIRAGGAEGALDAANILKPALARGQMQIIGATTLSEYKKYFAKDGALARRFQTVTVD 349 Query: 340 EPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAAS 399 EP D IL GL+ RYE HH +I D A+ AA LS RY+ DR LPDKAIDL+DEAAS Sbjct: 350 EPGEADAEQILLGLRGRYEEFHHARIEDGAVTAAVRLSRRYLTDRFLPDKAIDLMDEAAS 409 Query: 400 SIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQ-YSEL 458 +RM+ ++L + L+ E ++K+ + A ++ +L D+E++ +++L Sbjct: 410 RVRMKSVGGTDKL-------VGLRREIAGVVKDKNTAISRQDYETAAKLRDREKELHAKL 462 Query: 459 EEEWKAE 465 E ++E Sbjct: 463 EASRRSE 469 >UniRef50_D1Y107 Negative regulator of genetic competence ClpC/MecB n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y107_9BACT Length = 774 Score = 349 bits (896), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 168/320 (52%), Positives = 226/320 (70%), Gaps = 6/320 (1%) Query: 531 VTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590 V + E+A VL+ W+GIPV + E E ++LLR+E E+H R++GQ+EAV A+ A+RRSR+G Sbjct: 426 VDEEEVAGVLSEWSGIPVKTLTEHEAQRLLRLESEIHQRLVGQDEAVSALCRAVRRSRSG 485 Query: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAP 650 L DP RP+GSFLFLGP+GVGKTEL + LA +F S++A++ DMSE+ME+H ++L+GAP Sbjct: 486 LKDPRRPVGSFLFLGPSGVGKTELARCLARALFGSEKALLAFDMSEYMERHEAAKLIGAP 545 Query: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFR 710 PGYVGY+E G LTEAVRR P+SV+L DE+EKA+PDVFN+LLQ+L++GRLTD GRTVDF+ Sbjct: 546 PGYVGYDEEGRLTEAVRRHPWSVVLFDEIEKANPDVFNLLLQILEEGRLTDAHGRTVDFK 605 Query: 711 NTVVIMTSNLG------SDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFH 764 NTVVIMTSNLG + L E + E VLG V FRPEF+NR+D +VFH Sbjct: 606 NTVVIMTSNLGVRETAKAGLGFSASAEAEKKKQSEAVLGAVKEFFRPEFLNRVDAQLVFH 665 Query: 765 PLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQ 824 PL + + + I + L RL E G + ++ +A + L GARPL+R IQ + Sbjct: 666 PLSAEEMTRVFDIMMFDLRARLGEHGIILSMAKDAREFLLRAAAAQNQGARPLRRLIQTK 725 Query: 825 IENPLAQQILSGELVPGKVI 844 IE+PL+ ILSGE+ G + Sbjct: 726 IEDPLSDLILSGEVPDGSTV 745 Score = 336 bits (861), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 200/422 (47%), Positives = 266/422 (63%), Gaps = 23/422 (5%) Query: 8 NKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQA 67 +K + +A ++L LGH FI HLM L+ +E + L AG+ A + +I Sbjct: 9 SKRVIQIAHREALRLGH--AFIGTEHLMIGLIAEESSVAALALKEAGLAAEDVAREI--- 63 Query: 68 LNRLPQVEGTGGDVQ-PSQDLVR-VLNLCDKLAQKRGDNFISSELFVLAALES-RGTLAD 124 L P V P D R VLN LA++ +++ +E +L L + T Sbjct: 64 LALRPPAAPYAQPVDLPLSDRARGVLNAAIHLARELHSSYVGTEHLLLGVLSAPECTACH 123 Query: 125 ILKAAGATTANI-----TQAIEQMRGGESVNDQGAEDQRQA-------LKKYTIDLTERA 172 L G T N+ Q + Q E+ ND+ D R A L KY +DLT +A Sbjct: 124 ALAELGLDTENLRVSLKKQLLAQSSRQEAENDKENGDARPAADVKTPTLDKYCVDLTAKA 183 Query: 173 EQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGL 232 +G+LDP+IGR++E+ R +Q+L RR KNNPVL+G+PGVGKTAIVEGLA +I G P L Sbjct: 184 AKGELDPLIGREQEMHRMMQILCRRRKNNPVLVGDPGVGKTAIVEGLAYKIQKGSAPSLL 243 Query: 233 KGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGA 292 KG+RV+ L MG LVAG KYRGEFE+R+K ++++L + NVILFIDELHT+VGAG A+G+ Sbjct: 244 KGKRVVELTMGTLVAGTKYRGEFEDRMKKIVDELTAAK-NVILFIDELHTVVGAGSAEGS 302 Query: 293 MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRG 352 +DA N+LKP+LARGE +GATT DEY + IEKDAALERRFQ V V EP + +AIL+G Sbjct: 303 LDAANILKPSLARGEFQVIGATTRDEYTKNIEKDAALERRFQPVAVGEPDQDAALAILQG 362 Query: 353 LKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSK--PE 410 LKE YE HH V+ T+ A+ AA LS RY++DR LPDKAIDLIDEA + +R+ +D + PE Sbjct: 363 LKESYEKHHSVRYTEGALEAAVRLSSRYLSDRSLPDKAIDLIDEAGAKVRLDLDGRQIPE 422 Query: 411 EL 412 L Sbjct: 423 GL 424 >UniRef50_A4S065 Chaperone, Hsp100 family, ClpC-type n=4 Tax=Mamiellales RepID=A4S065_OSTLU Length = 781 Score = 349 bits (895), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 166/327 (50%), Positives = 229/327 (70%), Gaps = 5/327 (1%) Query: 531 VTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590 V ++ I EV+A+WTG+PV ++ E L+ EQEL RVIGQ EAV ++S AIRR+RAG Sbjct: 400 VDESHITEVVAQWTGVPVQQLSADESLSLMNFEQELGKRVIGQVEAVRSISQAIRRARAG 459 Query: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAP 650 LAD ++P+ S +F GPTGVGKTEL KA+A F +++AMVRIDMSE+ME HSVSRL+G P Sbjct: 460 LADASKPVASIIFSGPTGVGKTELAKAVAQTYFGAEKAMVRIDMSEYMESHSVSRLIGPP 519 Query: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFR 710 PGY+G+ EGG LTEAVR P+S++LLDE+EKAHPDVFNILLQVL+DGRLTD +GRTVDF Sbjct: 520 PGYIGFGEGGQLTEAVRTNPHSLVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFT 579 Query: 711 NTVVIMTSNLGSDLIQERFG-----ELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHP 765 N +++MTSN+GS I E E Y ++ V + +RPEF+NR+DE+++F P Sbjct: 580 NAMLVMTSNIGSREILESMSGEGEDEEKYKKLQTQVKRELGKEYRPEFLNRLDEIIIFRP 639 Query: 766 LGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQI 825 L +++IA + L + KR RG + +D LL NG+ P +GARP++R ++ + Sbjct: 640 LERPEVSAIADLMLASVSKRALARGITLDFTDSFKSLLYSNGFSPRFGARPMRRCVRGLL 699 Query: 826 ENPLAQQILSGELVPGKVIRLEVNEDR 852 EN LA+ +L G G + + ++D+ Sbjct: 700 ENNLAECMLDGFASSGDTVNFDYDDDQ 726 Score = 303 bits (776), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 151/249 (60%), Positives = 194/249 (77%), Gaps = 3/249 (1%) Query: 157 QRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIV 216 ++Q L +IDLT A +GKLDPV+GRDEE+ R +++L RR K+NP L+GEPGVGKTAI Sbjct: 145 KKQTLADCSIDLTAEAREGKLDPVLGRDEEVTRVMRILVRRRKSNPCLVGEPGVGKTAIA 204 Query: 217 EGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILF 276 EGLA I G+VPE LK +RV++L +G L+A KYRGEFEE++K V+ ++ KQ G++ILF Sbjct: 205 EGLAMMIAKGDVPESLKEKRVVSLQIGLLLADTKYRGEFEEKMKNVMEEV-KQAGDIILF 263 Query: 277 IDELHTMVGAGKADGA--MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334 +DE+H +VGAG MDAGN++KPALARGEL C+GATT+DEYR++IEKDAALERRFQ Sbjct: 264 VDEIHMLVGAGGTGEDGGMDAGNLMKPALARGELQCIGATTIDEYRKHIEKDAALERRFQ 323 Query: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394 V V EPS E T+ ILRGLK+ Y+ HH V TD A+ AA +LS RYI DR LPDKAID+I Sbjct: 324 PVRVIEPSPEQTLTILRGLKDTYQEHHGVSFTDEALRAAVSLSTRYINDRFLPDKAIDVI 383 Query: 395 DEAASSIRM 403 DEA + +++ Sbjct: 384 DEAGALVQL 392 >UniRef50_P42762 ERD1 protein, chloroplastic n=22 Tax=cellular organisms RepID=ERD1_ARATH Length = 945 Score = 348 bits (894), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 163/319 (51%), Positives = 227/319 (71%), Gaps = 12/319 (3%) Query: 535 EIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADP 594 +IA V + W+GIPV ++ ER L+ +E +L RV+GQ+EAV A+S A++RSR GL DP Sbjct: 594 DIAAVASVWSGIPVQQITADERMLLMSLEDQLRGRVVGQDEAVAAISRAVKRSRVGLKDP 653 Query: 595 NRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYV 654 +RPI + LF GPTGVGKTEL KALA F S+E+M+R+DMSE+ME+H+VS+L+G+PPGYV Sbjct: 654 DRPIAAMLFCGPTGVGKTELTKALAANYFGSEESMLRLDMSEYMERHTVSKLIGSPPGYV 713 Query: 655 GYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVV 714 G+EEGG LTEA+RRRP++V+L DE+EKAHPD+FNILLQ+ +DG LTD QGR V F+N ++ Sbjct: 714 GFEEGGMLTEAIRRRPFTVVLFDEIEKAHPDIFNILLQLFEDGHLTDSQGRRVSFKNALI 773 Query: 715 IMTSNLGSDLIQE-RFGEL-----------DYAHMKELVLGVVSHNFRPEFINRIDEVVV 762 IMTSN+GS I + R G + Y MK LV+ + + FRPE +NRIDE+V+ Sbjct: 774 IMTSNVGSLAIAKGRHGSIGFILDDDEEAASYTGMKALVVEELKNYFRPELLNRIDEIVI 833 Query: 763 FHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQ 822 F L + + I + L+ L RL G + +S+ +L+ + GYDP YGARPL+R + Sbjct: 834 FRQLEKAQMMEILNLMLQDLKSRLVALGVGLEVSEPVKELICKQGYDPAYGARPLRRTVT 893 Query: 823 QQIENPLAQQILSGELVPG 841 + +E+PL++ L+G PG Sbjct: 894 EIVEDPLSEAFLAGSFKPG 912 Score = 282 bits (722), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 142/265 (53%), Positives = 189/265 (71%), Gaps = 8/265 (3%) Query: 153 GAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGK 212 G + + L+++ +DLT RA +G +DPVIGR++E++R IQ+L RRTKNNP+L+GE GVGK Sbjct: 263 GGKKAKNVLEQFCVDLTARASEGLIDPVIGREKEVQRVIQILCRRTKNNPILLGEAGVGK 322 Query: 213 TAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGN 272 TAI EGLA I P L +R+++LD+G L+AGAK RGE E R+ +++++ K+ G Sbjct: 323 TAIAEGLAISIAEASAPGFLLTKRIMSLDIGLLMAGAKERGELEARVTALISEV-KKSGK 381 Query: 273 VILFIDELHTMVGAG------KADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKD 326 VILFIDE+HT++G+G K G +D N+LKP+L RGEL C+ +TTLDE+R EKD Sbjct: 382 VILFIDEVHTLIGSGTVGRGNKGSG-LDIANLLKPSLGRGELQCIASTTLDEFRSQFEKD 440 Query: 327 AALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQL 386 AL RRFQ V + EPS ED + IL GL+E+YE HH+ + T AI AA LS RYIADR L Sbjct: 441 KALARRFQPVLINEPSEEDAVKILLGLREKYEAHHNCKYTMEAIDAAVYLSSRYIADRFL 500 Query: 387 PDKAIDLIDEAASSIRMQIDSKPEE 411 PDKAIDLIDEA S R++ K +E Sbjct: 501 PDKAIDLIDEAGSRARIEAFRKKKE 525 >UniRef50_UPI000198575F PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera RepID=UPI000198575F Length = 923 Score = 347 bits (890), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 168/326 (51%), Positives = 229/326 (70%), Gaps = 11/326 (3%) Query: 535 EIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADP 594 EIA V + W+GIPV ++ ER L+ + ++L RV+GQ+ A+ ++S A++RSR GL DP Sbjct: 572 EIAVVASLWSGIPVQQITADERMLLVGLHEQLRKRVVGQDNAIASISRAVKRSRVGLKDP 631 Query: 595 NRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYV 654 NRPI + LF GPTGVGKTEL KALA F S+ AMVR+DMSE+ME+HSVS+L+G+PPGYV Sbjct: 632 NRPIAAMLFCGPTGVGKTELAKALAACYFGSEAAMVRLDMSEYMEQHSVSKLIGSPPGYV 691 Query: 655 GYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVV 714 GY EGG LTEA+RR+P++V+LLDE+EKAHPD+FNILLQ+ +DG LTD QGR V FRN +V Sbjct: 692 GYGEGGTLTEAIRRQPFTVVLLDEIEKAHPDIFNILLQMFEDGHLTDSQGRRVLFRNALV 751 Query: 715 IMTSNLGSDLI----QERFG-------ELDYAHMKELVLGVVSHNFRPEFINRIDEVVVF 763 +MTSN+GS I Q G YA MK LV+ + FRPE +NR+DE+VVF Sbjct: 752 VMTSNVGSAAIAKGRQSSIGFSIADDEPTSYAGMKALVMEELKAYFRPELLNRLDEIVVF 811 Query: 764 HPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQ 823 HPL + + I L+ + +RL G + +S + LL + GYD YGARPL+RA+ Sbjct: 812 HPLEKAQMLEILNTMLQEVKERLSSLGIGMEVSVSVIDLLCQQGYDKNYGARPLRRAVTL 871 Query: 824 QIENPLAQQILSGELVPGKVIRLEVN 849 IE+PL++ +L+ E PG + ++++ Sbjct: 872 IIEDPLSEALLTEEYQPGDIAVVDLD 897 Score = 278 bits (710), Expect = 9e-73, Method: Compositional matrix adjust. Identities = 157/363 (43%), Positives = 220/363 (60%), Gaps = 32/363 (8%) Query: 80 DVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALE-SRGTLADILKAAGATTANITQ 138 DV S RV + ++ G NFI+ E + G+ +LK GA ++ Sbjct: 165 DVPFSISTKRVFEAAIEYSRTMGYNFIAPEHIAIGLFTVDDGSAGRVLKRLGANVNHLAA 224 Query: 139 -AIEQMRG-----------------GESVNDQGA-------EDQRQALKKYTIDLTERAE 173 A+ +++G G+S + + A + ++ AL ++ +DLT RA Sbjct: 225 VAVSRLQGELAKDGSEPSATFKGMQGKSFSGKAAIVKSSGKKKEKSALAQFCVDLTARAT 284 Query: 174 QGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLK 233 G +DPVIGRD E++R +Q+L RRTKNNP+L+GE GVGKTAI EGLA I +VP L Sbjct: 285 DGLIDPVIGRDMEVQRVVQILCRRTKNNPILLGESGVGKTAIAEGLAISIAEADVPSFLL 344 Query: 234 GRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKAD--- 290 +R+++LD+G L+AG K RGE E R+ +++D+ K GN+ILFIDE+H +VG+G A Sbjct: 345 TKRIMSLDIGLLMAGTKERGELEARVTTLISDILKS-GNIILFIDEVHMLVGSGIAGRGN 403 Query: 291 --GAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIA 348 +D ++LKP+L RG+L C +TT+DEY + EKD AL RRFQ V + EPS E+ + Sbjct: 404 KGSGLDIASLLKPSLGRGQLQCFASTTIDEYVKLFEKDKALARRFQPVLINEPSQEEAVR 463 Query: 349 ILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSK 408 IL GL+E+YE HH + T AI AA LS RYI DR+LPDKAIDLIDEA S RM+ + Sbjct: 464 ILLGLREKYEAHHKCRFTLEAINAAVHLSARYIPDRRLPDKAIDLIDEAGSKARMEAYKR 523 Query: 409 PEE 411 +E Sbjct: 524 KKE 526 >UniRef50_Q6ETV8 Putative uncharacterized protein n=4 Tax=Poaceae RepID=Q6ETV8_ORYSJ Length = 822 Score = 344 bits (882), Expect = 9e-93, Method: Compositional matrix adjust. Identities = 159/319 (49%), Positives = 229/319 (71%), Gaps = 1/319 (0%) Query: 535 EIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADP 594 +A+V++RWTGIPV+ + + E+EKL+ + LH RV+GQ+EAV V+ A+ RSRAGL P Sbjct: 456 HVAQVVSRWTGIPVTTLDQEEKEKLIHLADRLHERVVGQDEAVKLVAQAVLRSRAGLEQP 515 Query: 595 NRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYV 654 +PIGSFLFLG TGVGKTEL KALA +FDS++ ++R DMSEF+ SV RL+GAPP Y Sbjct: 516 GQPIGSFLFLGSTGVGKTELAKALAEQLFDSEKMLIRFDMSEFVGSGSVLRLIGAPPSYH 575 Query: 655 GYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVV 714 G+++GG LTE VR RPYSVIL DEVEKA P VFN+ LQ+LDDG LTDG+GRTVDF+NT++ Sbjct: 576 GHQDGGQLTEKVRTRPYSVILFDEVEKADPSVFNVFLQLLDDGMLTDGKGRTVDFKNTII 635 Query: 715 IMTSNLGSDLIQERF-GELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIAS 773 IMTSNLG++ + E GE ++LV+ V FRPE +NR+ E+V+F PL ++ Sbjct: 636 IMTSNLGAEHLTEGVTGERTMEAARDLVMKQVQKYFRPELLNRLSEIVIFEPLSHDNLKE 695 Query: 774 IAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQI 833 + +IQ+K + + +G + SD+AL ++ Y+P+YGARP++R +Q+ + L++ + Sbjct: 696 VVKIQMKSVVTSVAHKGVSLLASDDALDVILSESYNPMYGARPVRRWVQKNVMTKLSEML 755 Query: 834 LSGELVPGKVIRLEVNEDR 852 ++G+ G I ++ +D+ Sbjct: 756 ITGDAGQGSTISIDATDDK 774 Score = 296 bits (758), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 153/256 (59%), Positives = 193/256 (75%), Gaps = 3/256 (1%) Query: 154 AEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKT 213 A + AL+ Y D+T A DPVIGRD+E+ R + +L RRTKN+ VL+G PGVGKT Sbjct: 174 APPKETALRTYGRDMTGSAAAA--DPVIGRDDEVDRVVCILCRRTKNSAVLVGAPGVGKT 231 Query: 214 AIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNV 273 AI EGLA+R+ G+VP L G RV+ LD+G+LVAG +YRG FEER+K V+ + G V Sbjct: 232 AIAEGLARRVAAGDVPAALAGARVVELDVGSLVAGTQYRGMFEERVKKVIQEAEGAAGKV 291 Query: 274 ILFIDELHTMVGAGKADG-AMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERR 332 ILFIDE+H ++GAG G +MD N+LKPALARG + CVGATT DEYR++IE+DAA ERR Sbjct: 292 ILFIDEMHMLLGAGACKGGSMDGANLLKPALARGRIRCVGATTFDEYRKHIERDAAFERR 351 Query: 333 FQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAID 392 FQKV V EP+ + TIAIL+GLK+RYE HH ++I D AIVAAA L+ RYI RQ PDKAID Sbjct: 352 FQKVIVEEPTTQATIAILQGLKQRYEEHHGLKIQDAAIVAAAQLADRYITGRQFPDKAID 411 Query: 393 LIDEAASSIRMQIDSK 408 LIDEA S++R++IDS+ Sbjct: 412 LIDEACSTVRLKIDSQ 427 >UniRef50_Q0E0M6 Os02g0537400 protein n=2 Tax=Poaceae RepID=Q0E0M6_ORYSJ Length = 388 Score = 343 bits (881), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 159/318 (50%), Positives = 229/318 (72%), Gaps = 1/318 (0%) Query: 536 IAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPN 595 +A+V++RWTGIPV+ + + E+EKL+ + LH RV+GQ+EAV V+ A+ RSRAGL P Sbjct: 23 VAQVVSRWTGIPVTTLDQEEKEKLIHLADRLHERVVGQDEAVKLVAQAVLRSRAGLEQPG 82 Query: 596 RPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVG 655 +PIGSFLFLG TGVGKTEL KALA +FDS++ ++R DMSEF+ SV RL+GAPP Y G Sbjct: 83 QPIGSFLFLGSTGVGKTELAKALAEQLFDSEKMLIRFDMSEFVGSGSVLRLIGAPPSYHG 142 Query: 656 YEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVI 715 +++GG LTE VR RPYSVIL DEVEKA P VFN+ LQ+LDDG LTDG+GRTVDF+NT++I Sbjct: 143 HQDGGQLTEKVRTRPYSVILFDEVEKADPSVFNVFLQLLDDGMLTDGKGRTVDFKNTIII 202 Query: 716 MTSNLGSDLIQERF-GELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASI 774 MTSNLG++ + E GE ++LV+ V FRPE +NR+ E+V+F PL ++ + Sbjct: 203 MTSNLGAEHLTEGVTGERTMEAARDLVMKQVQKYFRPELLNRLSEIVIFEPLSHDNLKEV 262 Query: 775 AQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQIL 834 +IQ+K + + +G + SD+AL ++ Y+P+YGARP++R +Q+ + L++ ++ Sbjct: 263 VKIQMKSVVTSVAHKGVSLLASDDALDVILSESYNPMYGARPVRRWVQKNVMTKLSEMLI 322 Query: 835 SGELVPGKVIRLEVNEDR 852 +G+ G I ++ +D+ Sbjct: 323 TGDAGQGSTISIDATDDK 340 >UniRef50_C3KS27 Chaperone ClpB n=2 Tax=Clostridium botulinum RepID=C3KS27_CLOB6 Length = 746 Score = 342 bits (876), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 161/316 (50%), Positives = 232/316 (73%), Gaps = 7/316 (2%) Query: 531 VTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590 V ++IAE++++WT IPVS ++E E KL +E L RVIGQN+AV AVSNA+ RSR Sbjct: 417 VKKSDIAEIVSKWTKIPVSDLLEDEARKLRNLESHLKKRVIGQNKAVQAVSNAVIRSRVC 476 Query: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAP 650 L++P +PIGSF+FLGPTGVGKTEL LA +F+ ++++RIDMSE+ +K ++RL+GAP Sbjct: 477 LSNPRKPIGSFIFLGPTGVGKTELACNLAKILFNDIDSVIRIDMSEYQDKSMLARLIGAP 536 Query: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFR 710 PGYVGYEEGG LTE VR RPYS++LLDE+EKAH D+ NI+LQ+LDDGR+TDGQGRT++FR Sbjct: 537 PGYVGYEEGGQLTEKVRCRPYSIVLLDEIEKAHRDIVNIMLQILDDGRVTDGQGRTINFR 596 Query: 711 NTVVIMTSNLGS-DLIQERFGE-LDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGE 768 NT++IMTSN+GS D+++E E L+ KEL+ F PEF+NRIDE ++F PL + Sbjct: 597 NTIIIMTSNIGSKDILKEDDEEKLNQKIKKELI-----KEFSPEFLNRIDESIIFKPLSK 651 Query: 769 QHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENP 828 + I +QL+ +L+ + +++I++ L+ + D +GARP++R+IQ +I P Sbjct: 652 DSLIKIISLQLREFIAQLQNKNIKVNITENVKLLILDYLEDLQFGARPIRRSIQSKIITP 711 Query: 829 LAQQILSGELVPGKVI 844 ++++I+ G +V G I Sbjct: 712 ISRKIVEGNIVEGDSI 727 Score = 339 bits (870), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 212/557 (38%), Positives = 319/557 (57%), Gaps = 33/557 (5%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +++L N+ + L++A+ +A+ ++ IE L + +V +L L Sbjct: 1 MNKLNNELKQVLSEAKFIAIKFNHTRIEVEDFFIVLAKHKNSNVYKILR-------LLNI 53 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKL----------AQKRGDNFISSELFV 112 D+ +N + ++ SQ+++ + D L A + I S+ + Sbjct: 54 DVKDLINEVVSEYKDKNSIRYSQEMLDSIVASDSLKEIIMKASIEAINMKNELIESQHIL 113 Query: 113 LAALESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERA 172 LA + TL +K G + I + + +++ N D+ L KY IDLT+ A Sbjct: 114 LALSKEDSTLGKKIKNKGIDESKILEGLSKIQFSNEKNYNS--DEESFLNKYAIDLTKCA 171 Query: 173 EQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGL 232 + K + V+GR++E+ I++L R++KNNPVLIGEPGVGKTAIVEGLA I+ G+VP+ L Sbjct: 172 LENKFNMVLGREDELGYVIEILLRKSKNNPVLIGEPGVGKTAIVEGLACLIVQGKVPDEL 231 Query: 233 KGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGA 292 K +++ +LD+GALVAG+K+RGEFEERLK V+ ++ G +ILFIDE+HT+VGAG DG Sbjct: 232 KNKKIYSLDLGALVAGSKFRGEFEERLKKVITEIQNSYGQIILFIDEMHTLVGAGSTDGP 291 Query: 293 MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRG 352 MDA N+LKPALARGELHC+GATT+ EYR+YIEKD ALERRF+ V V EPS+E TI IL G Sbjct: 292 MDASNLLKPALARGELHCIGATTIKEYRKYIEKDPALERRFKTVLVEEPSIEKTIHILDG 351 Query: 353 LKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEEL 412 +K YE +H+V+ AI AA TLS RYI++R LPDKAIDL+DEAA+ R +I SK + Sbjct: 352 IKNIYEDYHNVKFNRSAIKAAVTLSSRYISERFLPDKAIDLLDEAAA--RKKIISKVDRD 409 Query: 413 DRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLS-G 471 + D +I++K A + SK +++ L D+ R+ LE K + Sbjct: 410 NSSD--VIEVKKSDIAEI-----VSKWTKIPVSDLLEDEARKLRNLESHLKKRVIGQNKA 462 Query: 472 TQTIKAELEQAKIAIEQARR-VGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNK 530 Q + + ++++ + R+ +G + GK EL L A L ++R Sbjct: 463 VQAVSNAVIRSRVCLSNPRKPIGSFIFLGPTGVGK-TELACNL--AKILFNDIDSVIRID 519 Query: 531 VTDAEIAEVLARWTGIP 547 +++ + +LAR G P Sbjct: 520 MSEYQDKSMLARLIGAP 536 >UniRef50_B9H7W9 Predicted protein n=3 Tax=rosids RepID=B9H7W9_POPTR Length = 643 Score = 336 bits (861), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 165/323 (51%), Positives = 230/323 (71%), Gaps = 2/323 (0%) Query: 531 VTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590 VT+ +I V++ TGIP+ ++ + E +LL ME ELH ++GQ EAV AVS+AIRR+R G Sbjct: 299 VTEEDIQAVVSMVTGIPLDKVTDKESRRLLNMEAELHKYIVGQEEAVKAVSHAIRRARVG 358 Query: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAP 650 DPN+PI SFLF GPTGVGKTEL KALA F S EA+VRIDMSE+MEKH+VS+L G+P Sbjct: 359 TKDPNKPIASFLFTGPTGVGKTELAKALAVEYFGSKEAVVRIDMSEYMEKHTVSKLFGSP 418 Query: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFR 710 PGY+GY++GG TEAVR R ++V+L DE+EKAH DV + LQ+LDDG LTDG+GR VDF+ Sbjct: 419 PGYIGYDDGGQFTEAVRCRAHTVVLFDEIEKAHQDVNRVFLQILDDGTLTDGKGRKVDFK 478 Query: 711 NTVVIMTSNLGSDLI--QERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGE 768 NT++IMTSN+G+ LI ++ E+ + +K +V + F PEF+NRIDEV+VF L Sbjct: 479 NTIIIMTSNIGNSLIAQEDEEDEIRFNTVKLIVAEELKKEFSPEFLNRIDEVIVFRKLNN 538 Query: 769 QHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENP 828 + IA + L +Y RL+ + I ++D + + E G + YGARPLKRAI + +E+ Sbjct: 539 AQLNEIADLMLAEVYGRLKAKNIIIRVTDGLKRKIIEEGNNLSYGARPLKRAIVRLLEDN 598 Query: 829 LAQQILSGELVPGKVIRLEVNED 851 +A+ IL+G + G+ + ++VN + Sbjct: 599 IAKGILNGFVEEGRSVIVDVNSN 621 Score = 287 bits (735), Expect = 9e-76, Method: Compositional matrix adjust. Identities = 150/300 (50%), Positives = 209/300 (69%), Gaps = 9/300 (3%) Query: 116 LESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAE-- 173 LE + AD+L G ++T+ ++++ S + AE L T+ L Sbjct: 4 LEKQHFKADMLNKYGT---DLTKMAQEVKPDFSFSHVLAEPVTSELATITLTLASLNGIL 60 Query: 174 QGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLK 233 QGKLD V+GR ++I R Q+L +R KNNP L+G+PGVGKT IVEGLA I+ G VP L+ Sbjct: 61 QGKLDQVVGRRKQIERVTQILCKRRKNNPCLVGDPGVGKTVIVEGLAANIVKGTVPSKLE 120 Query: 234 GRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAM 293 G+++ ALDM LVAG K+ G+FEERL G+++++ + +GN++LFIDELHT+VG G+ + Sbjct: 121 GKKIFALDMARLVAGTKFHGDFEERLTGIVDEVKQSDGNIVLFIDELHTLVGNGQ---TL 177 Query: 294 DAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGL 353 DA N+LKPALARGEL C+GATT+DEYR+YIEKD AL+RRF V V EPSV++ + IL+G+ Sbjct: 178 DATNILKPALARGELKCIGATTIDEYRRYIEKDGALKRRFLHVDVPEPSVDEAVEILKGI 237 Query: 354 KERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRM-QIDSKPEEL 412 + +YE HH V+ D A+VAA LS++YI+ LPDKAIDLIDEA + +++ Q S E+L Sbjct: 238 QGKYEAHHDVKYADEALVAAVRLSNQYISGLFLPDKAIDLIDEAGARVQLRQARSASEKL 297 >UniRef50_C5TJM2 Chaperone protein ClpB n=1 Tax=Neisseria flavescens SK114 RepID=C5TJM2_NEIFL Length = 277 Score = 332 bits (851), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 172/276 (62%), Positives = 210/276 (76%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 MR D+LT KFQ AL + QSLAL D+ ++E ++ ALL+ + + LL AG+N Q+ Sbjct: 1 MRFDKLTAKFQQALQEGQSLALAADSSYLEAGFILKALLDDQNSGAAALLAHAGVNVPQV 60 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG 120 + + Q L+ LP+V G GGD+ PS++L VLNL DK A KR D +I+SELF+LA ++ Sbjct: 61 KQHLQQHLSSLPKVSGQGGDIMPSRELQAVLNLMDKAATKRDDAYIASELFLLALVQQND 120 Query: 121 TLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPV 180 ILK AGAT NI AI+ +RGG++VND AEDQR ALKKYT+DLT+RA GKLDPV Sbjct: 121 ATGKILKEAGATEQNINAAIDAVRGGQNVNDANAEDQRDALKKYTLDLTQRARDGKLDPV 180 Query: 181 IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL 240 IGRD+EIRR IQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRI+NGEVPE L+ +R+L L Sbjct: 181 IGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVL 240 Query: 241 DMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILF 276 D+ AL+AGAKYRGEFEERLKGVLNDLAK +G F Sbjct: 241 DLAALIAGAKYRGEFEERLKGVLNDLAKDDGKHFDF 276 >UniRef50_UPI000187E1EB hypothetical protein MPER_11665 n=1 Tax=Moniliophthora perniciosa FA553 RepID=UPI000187E1EB Length = 448 Score = 324 bits (830), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 156/238 (65%), Positives = 196/238 (82%), Gaps = 1/238 (0%) Query: 165 TIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRII 224 ++ LTE A +GKLDP IGRDEEIRRTIQ+L RRTK+NPVLIG PGVGKTAI+EGLA RI+ Sbjct: 1 SVYLTELARKGKLDPTIGRDEEIRRTIQILSRRTKSNPVLIGPPGVGKTAILEGLASRIV 60 Query: 225 NGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMV 284 EVPE L+ +RVL++D+ A++AG+ RG+FEE+ K ++ D+ ++ GNVI FIDE+HT+ Sbjct: 61 AKEVPESLQNKRVLSIDLSAIMAGSGIRGQFEEKFKALIRDIEEEAGNVICFIDEVHTLF 120 Query: 285 GAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVE 344 GKA+G++DAG M+KPALARG L VGATT DEYR+ I KDAALERRFQ V ++EPSVE Sbjct: 121 NLGKAEGSIDAGQMIKPALARG-LQLVGATTPDEYRKTIGKDAALERRFQPVQISEPSVE 179 Query: 345 DTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIR 402 TI+ILRGLK RYE+HH V+I D A+V AA S RY++DR LPDKAIDL+DEAAS++R Sbjct: 180 STISILRGLKPRYEVHHGVEIFDSALVTAAVYSARYVSDRDLPDKAIDLVDEAASALR 237 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 78/218 (35%), Positives = 121/218 (55%), Gaps = 42/218 (19%) Query: 621 FMF-DSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEV 679 F+F D ++ I+MSE+ ++H++SRLV A PGYVG+ EGG LTEAV R PY+VILLDE+ Sbjct: 245 FLFNDEQRGLININMSEYHDRHTISRLVEAAPGYVGF-EGGQLTEAVGRNPYAVILLDEL 303 Query: 680 EKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKE 739 EKAH +I T+ QGR VDF+NT++ + Sbjct: 304 EKAHKASSSI----------TNSQGRKVDFKNTIICLIE--------------------- 332 Query: 740 LVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRL-YKRLEERGYEIHISDE 798 VL S F PE +NR+D ++VF+ L + I + ++ +RL KR+ + ++ Sbjct: 333 -VLQRTSEYFPPELLNRLDTMLVFNKLSRESILQVVSLRAERLRNKRI-----SFDVDEK 386 Query: 799 ALKLLSENGYDPVYGARPLKRAIQQQIE--NPLAQQIL 834 A + L+ +GY +YGAR + R + + + + L Q++L Sbjct: 387 AREWLANHGYSEMYGARAIARMVSKLVHMVDSLRQRVL 424 >UniRef50_A8I1M5 ClpD chaperone, Hsp100 family n=1 Tax=Chlamydomonas reinhardtii RepID=A8I1M5_CHLRE Length = 997 Score = 321 bits (822), Expect = 9e-86, Method: Compositional matrix adjust. Identities = 173/398 (43%), Positives = 243/398 (61%), Gaps = 33/398 (8%) Query: 493 GDLARMSELQ--------YGKIPELEKQLEAATQLEGKTMRLLRNKVTDAE-IAEVLARW 543 GDL+R ++ Q G +P Q++ +L G + V E I ++A W Sbjct: 518 GDLSRGNQKQEEACINANPGVLPACLPQVDYRAELAGPSCEGSVLPVVGVEDIEAIVAAW 577 Query: 544 TGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLF 603 T IPV RM + E+E+LL M L V+GQ +AV+A+S A+ R+R GL P RP+ + LF Sbjct: 578 TSIPVERMSDGEKERLLNMRHTLASHVVGQADAVEAISTALCRARCGLNLPRRPVAALLF 637 Query: 604 LGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLT 663 +GPTGVGKTEL K L+ + S EA++R+DMSE+ME+HSVS+LVGAPPGYVG+ +GG LT Sbjct: 638 VGPTGVGKTELAKVLSEQYYGSREALLRLDMSEYMERHSVSKLVGAPPGYVGFGDGGKLT 697 Query: 664 EAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSD 723 EA+RRRP+SV+L DE+EKAHPDVF+ILLQ+L+DGRLTD QGR V F+N ++I+TSN+GS Sbjct: 698 EAIRRRPFSVVLFDEIEKAHPDVFSILLQILEDGRLTDSQGRVVSFKNAMIILTSNVGSR 757 Query: 724 LIQ------------------------ERFGELDYAHMKELVLGVVSHNFRPEFINRIDE 759 LI E+ +K+ VLG V F PE +NR DE Sbjct: 758 LIAAAGNAARNGAGVFSRPGMGAGPTDEKLQAAQAFKLKQEVLGEVRGFFAPELLNRFDE 817 Query: 760 VVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKR 819 VVF L + +A IAQ+ L + R ERG + I+ ++ + G+ YGARPL++ Sbjct: 818 TVVFQRLRREDVAHIAQLLLAQTIARAGERGLGLRIAPALMEHIVAEGHSDEYGARPLRQ 877 Query: 820 AIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857 AI + +++PL+ +L + G + L +N D V V+ Sbjct: 878 AIVRLVDDPLSDAVLHRKFGAGVALVLGLNSDGAVTVR 915 Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 171/410 (41%), Positives = 246/410 (60%), Gaps = 29/410 (7%) Query: 14 LADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQALNRLPQ 73 +A A++ A GH E H++ L+ +E S + L S G+++ + + + R Sbjct: 88 IAQAEAKAFGHTEVNTE--HILLGLVAEESLSKNGYLNS-GVSSERAKAAVEALFGRKRP 144 Query: 74 VEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLAD-----ILKA 128 V G + S+++ ++ ++ N+IS E +LA L ++ D +L + Sbjct: 145 VS-HGESIPFSREVRKMFENATHECKRSNVNWISPEHILLAML----SMPDCNGKRVLHS 199 Query: 129 AGATTANI-TQAIEQMRGGESVNDQGA-------EDQRQALKKYTIDLTERAEQGKLDPV 180 A + +A ++++G E + ++Y DL G++DPV Sbjct: 200 LSADVEGLKAEAGKRLKGDTDAEQAKKKQGAAAKEQGPKMTEEYCKDLCAEVRAGRIDPV 259 Query: 181 IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIIN---GEVPEGLKGRRV 237 +GRD E+ R Q+L RRTKNNP+L+GEPGVGKTAI EGLA I++ +PE L +R+ Sbjct: 260 VGRDREVGRVCQILARRTKNNPILLGEPGVGKTAIAEGLAAAIVHRAASPLPEFLHSKRI 319 Query: 238 LALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGA----M 293 L LD+G L+AGAK RGE E R+ ++ ++ ++ GN+IL IDE+HT+VGAG + Sbjct: 320 LQLDVGLLIAGAKERGELESRVTKLIAEI-REAGNIILMIDEIHTLVGAGSVGRGGGGGL 378 Query: 294 DAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGL 353 D N++KPALARGE +GATTLDE+R+YIE+DAALERRFQ V V EP+ E T+ IL+GL Sbjct: 379 DIANLVKPALARGEFQVIGATTLDEHRKYIERDAALERRFQPVTVDEPTPEATLTILQGL 438 Query: 354 KERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRM 403 KERYE HH T+ A+ AA LSH+YIADR LPDKAIDLIDEA S R+ Sbjct: 439 KERYERHHRCAYTEEALAAAVALSHKYIADRFLPDKAIDLIDEAGSRARI 488 >UniRef50_B0MVC3 Putative uncharacterized protein n=3 Tax=Bacteroidales RepID=B0MVC3_9BACT Length = 819 Score = 319 bits (817), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 159/332 (47%), Positives = 223/332 (67%), Gaps = 10/332 (3%) Query: 536 IAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPN 595 I +V+ TGIP R+ SE E+L + L RVIGQ EAV+ +S +I+RSRAGL D Sbjct: 486 IEQVITSMTGIPAERLSGSESERLRGLADYLSARVIGQCEAVEKISRSIQRSRAGLKDEG 545 Query: 596 RPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVG 655 RPIG F+F+GPTGVGKT L K L+ ++FD ++ ++RIDMSE+ EKH+V+RL+G+PPGYVG Sbjct: 546 RPIGVFMFVGPTGVGKTLLAKELSKWLFDENKGLIRIDMSEYSEKHNVARLIGSPPGYVG 605 Query: 656 YEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVI 715 Y EGG LTEAVRR PYSV+L DE+EKAHP+VFN LLQ+ D+G LTDG GR VDFRNTV+I Sbjct: 606 YGEGGQLTEAVRRHPYSVVLFDEIEKAHPEVFNTLLQIFDEGHLTDGSGRKVDFRNTVII 665 Query: 716 MTSNLGSDLIQERFGELDYAHMKEL----------VLGVVSHNFRPEFINRIDEVVVFHP 765 +TSN+GS R ++ Y+ + + F PEF+NRID++V+F Sbjct: 666 LTSNVGSRAAAIRSTQVGYSTCSKSDTQQKAPQSEYRRALEETFAPEFLNRIDDIVIFRT 725 Query: 766 LGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQI 825 L + I ++LK L R + GY++ I+DEA + L+ GY YG R L+R + ++I Sbjct: 726 LDLSDVERIIDLELKGLLSRTDRLGYKVEITDEAKRTLAAIGYQRKYGVRALRRTLLERI 785 Query: 826 ENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857 E PL+ I+ G+L G+ + +E + ++ V ++ Sbjct: 786 EEPLSGLIIDGKLHSGERVIVEPDGEKEVILR 817 Score = 282 bits (722), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 137/254 (53%), Positives = 185/254 (72%), Gaps = 1/254 (0%) Query: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220 L K+ DLT A +G++DPV+GR+ E+ R +Q+L RR KNNP+LIGE GVGK+AIVEGLA Sbjct: 181 LDKFGTDLTYEARRGRIDPVVGREREMERIVQILSRRKKNNPILIGEAGVGKSAIVEGLA 240 Query: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280 R+ EVP ++G+R+ +LD+ +L+AG KYRGEFEER++ +L +L +++ + ILFIDE+ Sbjct: 241 LRMAADEVPATIRGKRLYSLDVSSLLAGTKYRGEFEERMQRLLEELRRKQ-DSILFIDEI 299 Query: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340 HT+ GAG G++D N+LKPALARGEL +GATTLDEYR+ IE D ALERRFQK+ V Sbjct: 300 HTIAGAGSTQGSLDTANILKPALARGELQVIGATTLDEYREDIESDPALERRFQKILVEP 359 Query: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400 S E+T+ IL + YE HH V+ +D A+ A L+ RYI DR PDKAID++DEA + Sbjct: 360 ASEEETLQILHNIAPHYERHHGVRYSDEALRACVALTGRYITDRNFPDKAIDVLDEAGAR 419 Query: 401 IRMQIDSKPEELDR 414 I +Q K E+ R Sbjct: 420 IHLQDKGKTEKPSR 433 >UniRef50_B0MPJ8 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MPJ8_9FIRM Length = 794 Score = 318 bits (814), Expect = 8e-85, Method: Compositional matrix adjust. Identities = 176/418 (42%), Positives = 250/418 (59%), Gaps = 30/418 (7%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M + T+K AL A + A+ + ++ H++ L GG +L +G+ + Sbjct: 1 MEFNGFTDKANDALNCALTCAMSMGHTYVGSEHILYGLCGSNGGVAYTVLRQSGVTCNSI 60 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG 120 + IN + + + T D P R+L +A+ G ++ + A + Sbjct: 61 ASRINALIGKGLPTQLTVSDFTPRSR--RILESAVMIARNAGKTAAGTDHILRAIMRDNE 118 Query: 121 TLADILKAAGATTANITQAIEQMR-GGESVNDQGAEDQRQ-------------ALKKYTI 166 A + + +M GE+V DQGA+ Q+ AL Y Sbjct: 119 CYASVF-------------LHEMGISGEAVLDQGADTQKNTPQGKRNGSVLPSALSGYGR 165 Query: 167 DLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIING 226 +LT A++GK+DP GR+ E R I++L RR+KNNP L+GE GVGKTAI EGLA +I G Sbjct: 166 NLTMLAQEGKIDPCFGRERETNRVIEILLRRSKNNPCLVGEAGVGKTAIAEGLAMKIAGG 225 Query: 227 EVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGA 286 VP+ LK +++ LD+ +++AGAKYRG+FEERLK V +++ + +GN+I+FIDE+H +VGA Sbjct: 226 NVPDELKTKKIYMLDITSMLAGAKYRGDFEERLKRVFDEI-RNDGNIIVFIDEIHNIVGA 284 Query: 287 GKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDT 346 G A+GA+DA N+LKP LARGE+ +GATT EY++YIEKD ALERR Q V V EP+ E+T Sbjct: 285 GAAEGAIDAANILKPMLARGEIRLIGATTNAEYKKYIEKDPALERRLQPVTVNEPTEEET 344 Query: 347 IAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQ 404 + IL GL+ RYE +H V+ITD AI AA LS RYI DR LPDKAIDLIDE ++ IR+ Sbjct: 345 VTILNGLRCRYESYHKVKITDEAISAAVGLSVRYINDRFLPDKAIDLIDEGSAKIRLS 402 Score = 315 bits (807), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 159/333 (47%), Positives = 218/333 (65%), Gaps = 6/333 (1%) Query: 531 VTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590 +T +IA+V+ ++TGIPV + L +E+ L VIGQ +AV AV+NA+RR R+G Sbjct: 453 LTADDIADVVTQYTGIPVRYNGNDTTKWLACLEKTLSENVIGQEKAVRAVANAVRRGRSG 512 Query: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAP 650 L+D +RP+GSF+FLG TGVGKT+ CK LA +F +++A++R DMSE+ EKHSVS+L+GAP Sbjct: 513 LSDEHRPVGSFIFLGTTGVGKTKCCKELAKALFGTEKALIRFDMSEYSEKHSVSKLIGAP 572 Query: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFR 710 GYVGYE+GG LT+ VR+ PYSV+L DE+EKAHPDVF+ILLQVLDDGRLTD GRTVDF Sbjct: 573 AGYVGYEDGGRLTDRVRKSPYSVVLFDEIEKAHPDVFDILLQVLDDGRLTDSGGRTVDFT 632 Query: 711 NTVVIMTSNLGSDLIQERFGELDYA------HMKELVLGVVSHNFRPEFINRIDEVVVFH 764 NTV+IMT N+GS LI + L + + LV G + FRPEF+ R+DEVVVF+ Sbjct: 633 NTVIIMTGNIGSALIAKGKSRLGFGIQQRQEEISGLVKGELEKYFRPEFLGRVDEVVVFN 692 Query: 765 PLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQ 824 L I + L L K+ E +G S+ + L GARP+ + I + Sbjct: 693 ELSCAEYKLICEKMLSELSKQCERQGIAFSWSERLSEKLCAEAKSRNEGARPIAKLIDKN 752 Query: 825 IENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857 + N ++ I+SGE G I ++ +D +V+ Sbjct: 753 VRNMISDGIISGEFSTGDGIYADIADDDSYSVR 785 >UniRef50_B6KUA3 ClpB protein, putative n=3 Tax=Toxoplasma gondii RepID=B6KUA3_TOXGO Length = 970 Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 178/420 (42%), Positives = 259/420 (61%), Gaps = 33/420 (7%) Query: 14 LADAQSLALGHDNQFIEPLHLMSALLNQEG-GSVSPLLTSAGINAGQLRTDINQALNRLP 72 L A+ LA+ ++ I P+H ++ LL +G S+ L G N +L+ ++ L +LP Sbjct: 68 LDQAEVLAMYMRHRQITPVHFLTVLLEVQGEFSIVRSLEQCGANVYELKKAMSNVLIKLP 127 Query: 73 QVEGTGGDVQ------PSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADIL 126 T DV+ + L RV ++AQK I E + + E L L Sbjct: 128 ----TSADVEIVDELESTPQLKRVALRALEIAQKDKKQTIGMEHLITSLFEE-NNLRKSL 182 Query: 127 KAAGA--------TTANITQAIEQMRGGESVNDQGAE------------DQRQALKKYTI 166 + AG +T +Q S+ Q E + ++ + + Sbjct: 183 EQAGCNVKVFLEHSTTMYENKFKQDVASRSMKKQPTEGSPATSRAKPDASDEEFVQSFGV 242 Query: 167 DLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIING 226 D+T+ A +GKL+PV+GR++EI+ + VL R+ K NP L+GEPGVGKTA+VEGLAQR++ G Sbjct: 243 DMTKLAAEGKLEPVVGRNKEIKEVLTVLSRKGKGNPCLVGEPGVGKTAVVEGLAQRLVEG 302 Query: 227 EVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGA 286 VP+ L+ + + A+D+GAL+AGA YRGEFE+R+K ++ QEG VILFIDELH ++GA Sbjct: 303 MVPKSLENKILFAVDLGALIAGATYRGEFEKRMKALIRYAVNQEGRVILFIDELHMLMGA 362 Query: 287 GKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDT 346 GK+DG MDA N+LKP +ARGE+ VGATT +EY+ IEKDAA+ERR + +F+ EPS + Sbjct: 363 GKSDGTMDAANLLKPPMARGEIRLVGATTQEEYK-IIEKDAAMERRLKPIFIEEPSTDRA 421 Query: 347 IAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQID 406 I ILR L +++E HH ++I+D AIVAA LSH+YI +R+LPDKAIDL+DEAA++ R++ D Sbjct: 422 IYILRKLSDKFESHHEMKISDEAIVAAVMLSHKYIRNRKLPDKAIDLLDEAAATKRVKWD 481 Score = 261 bits (667), Expect = 9e-68, Method: Compositional matrix adjust. Identities = 117/195 (60%), Positives = 159/195 (81%) Query: 531 VTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590 +T ++A+V++ WTGIP++++ + E+ K+LR+ LH RVIGQ++AV AV++A+ R+RAG Sbjct: 548 LTADDVAQVISLWTGIPLAKLTDDEKSKILRLSDLLHSRVIGQDDAVKAVADAMVRARAG 607 Query: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAP 650 L+ P+GSFLFLGPTGVGKTEL KALA MF S++ ++RIDMSEF E HSVSRL+G+P Sbjct: 608 LSREGMPVGSFLFLGPTGVGKTELAKALAMEMFHSEKNLIRIDMSEFSEAHSVSRLIGSP 667 Query: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFR 710 PGYVG++ GG LTEAVRRRP+SV+L DE+EK H + NI+LQ+LD+GRLTDG+G VDF Sbjct: 668 PGYVGHDAGGQLTEAVRRRPHSVVLFDEIEKGHQQILNIMLQMLDEGRLTDGKGLLVDFT 727 Query: 711 NTVVIMTSNLGSDLI 725 N V+I+TSN+G+ I Sbjct: 728 NCVIILTSNVGAQYI 742 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/93 (36%), Positives = 49/93 (52%) Query: 749 FRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGY 808 +PE +NR V++F P+ + I IQ K L L+ +G E+ I A + + + Y Sbjct: 825 LKPEVVNRFSGVIIFEPMNPADVRKILAIQSKDLKNALQRKGIELVIDASAEEFIVQRSY 884 Query: 809 DPVYGARPLKRAIQQQIENPLAQQILSGELVPG 841 +GARPLKR + I +A ILSG L PG Sbjct: 885 THKFGARPLKRFVDNHIGAKMAPWILSGYLQPG 917 >UniRef50_B3ERL7 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ERL7_AMOA5 Length = 573 Score = 312 bits (799), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 196/505 (38%), Positives = 290/505 (57%), Gaps = 49/505 (9%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 LT+K + +A ++ AL + I PLH++ +L E +L + GI +LR Sbjct: 5 LTHKAKEIIALSRKEALKLHSNSIRPLHILLGILQYESCLAYKILFALGIPMEELRI--- 61 Query: 66 QALNRLPQVE--------GTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALE 117 AL + Q E G ++ + ++ +L L + A+ I +E +LAAL+ Sbjct: 62 -ALEKSEQQEHEEDMIDNGQVNGIKLTHEIESLLKLTQQYAKALKSEAIGTEHILLAALK 120 Query: 118 SRGTLADILKAAGATTANIT-------------------QAIEQMRGGESVNDQGAEDQR 158 + AD+ N+T Q +E+ R S N +ED Sbjct: 121 N----ADVHTKYILDQFNVTYEAIERVIVHRLGQYYIVAQEMEESRDDASENMDDSEDST 176 Query: 159 QA------------LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIG 206 + L ++ DL++ AE+GKLDP+IGR +EI R Q+L RR KNN +LIG Sbjct: 177 TSKHKDIEKTRTPILDNFSRDLSKLAEEGKLDPIIGRKKEIERVAQILSRRRKNNALLIG 236 Query: 207 EPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDL 266 EPGVGKTAI EGLA +I+ G+V + L G+RV++LD+ ALVAG KYRG+FEER+K ++N+L Sbjct: 237 EPGVGKTAIAEGLALQIMQGKVAKPLLGKRVVSLDVAALVAGTKYRGQFEERIKAIMNEL 296 Query: 267 AKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKD 326 K + VILFIDELHT+VGAG A G++DA N+LKPALARG++ C+GATTL EYRQYIEKD Sbjct: 297 VKSK-QVILFIDELHTIVGAGSAAGSLDAANILKPALARGDIQCIGATTLSEYRQYIEKD 355 Query: 327 AALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQL 386 AL RRFQ V V ++ ++I IL LK+ YE +H V T I A L+ RYI++R L Sbjct: 356 GALTRRFQSVRVEPTTIVESIEILNNLKDTYEEYHSVTYTPEVIKACVDLADRYISNRLL 415 Query: 387 PDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNE 446 PDKAID++DE +S+ M P ++ +L I +K + ++ +L + Sbjct: 416 PDKAIDVMDEVGASVHMHNIQVPSKIAKLADNIELIKANKNKAVRNQKYEEAAQLRDQEK 475 Query: 447 ELSDK-ERQYSELEEEWKAEKASLS 470 +L +K E + ++ E+E K+++ ++ Sbjct: 476 KLYEKFELEKTKWEQELKSKRYPIT 500 >UniRef50_A6Q1Y5 ATP-dependent Clp protease, ATP-binding subunit ClpA n=3 Tax=Epsilonproteobacteria RepID=A6Q1Y5_NITSB Length = 729 Score = 311 bits (796), Expect = 9e-83, Method: Compositional matrix adjust. Identities = 177/403 (43%), Positives = 245/403 (60%), Gaps = 7/403 (1%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 ++N+ +A A H ++++ H+ ALLN G+ +L AG + ++ + Sbjct: 2 ISNQLNSIFKEAVKYAKRHRHEYLTVEHVFLALLNSPEGA--KILKEAGADIEIMKRKLI 59 Query: 66 QALNRL--PQVEGTGGDVQPSQDLVRVL-NLCDKLAQKRGDNFISSELFVLAALESRGTL 122 Q L + P E + + L RV+ N+ + +L V E Sbjct: 60 QHLESVLKPLPENVVREPFETVALSRVIENMIRHIQNAEKKEATVGDLLVALFDEEHSYS 119 Query: 123 ADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIG 182 +LK G + +I + + D+ L K+TIDL + A++GK+DPVIG Sbjct: 120 VYLLKEQGISKLDIMEIVSHQAEVVESKPSKKTDEESYLAKFTIDLLKEAKEGKIDPVIG 179 Query: 183 RDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDM 242 RD+EI R +Q+L RR KNNP+L+GEPGVGKTAI EGLA +I GE+P+ L+G + +LDM Sbjct: 180 RDKEIERVMQILCRRKKNNPLLVGEPGVGKTAIAEGLALKIAAGEIPDVLEGASLYSLDM 239 Query: 243 GALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKAD-GAMDAGNMLKP 301 GAL+AG KYRG+FE+RLKGV+ +L K N ILFIDE+HT+VGAG G+MDA NMLKP Sbjct: 240 GALLAGTKYRGDFEKRLKGVVEEL-KSIPNAILFIDEIHTIVGAGATQGGSMDASNMLKP 298 Query: 302 ALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHH 361 ALA G + C+GATT E+R ++EKD AL RRF KV V EP +E T IL+GLK++YE HH Sbjct: 299 ALASGAIKCIGATTYAEFRNFLEKDRALSRRFAKVDVKEPDLETTFKILKGLKDKYEKHH 358 Query: 362 HVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQ 404 V+ A+ +A LS +YI DRQLPDKAIDLIDE +S ++ Sbjct: 359 KVRYHINALRSAVELSDKYINDRQLPDKAIDLIDEVGASFHLR 401 Score = 300 bits (767), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 152/326 (46%), Positives = 213/326 (65%), Gaps = 18/326 (5%) Query: 528 RNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRS 587 R+ VT +I + +A+ G+P R+ + E L +E++L RV+GQ EAV+ ++ AI+RS Sbjct: 405 RSVVTVNDIEDTIAKMVGLPPQRVTSDDLEILKNLEEKLKERVLGQEEAVEQLAMAIKRS 464 Query: 588 RAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLV 647 RAGL PN+PIGSFLF+GPTGVGKTEL K LA M E R DMSE+MEKH+VSRL+ Sbjct: 465 RAGLNPPNKPIGSFLFVGPTGVGKTELAKELARTMGVHFE---RFDMSEYMEKHAVSRLI 521 Query: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTV 707 GAPPGY+GYEEGG LTE +R+ PY+V+LLDE+EKAHPD+ NILLQV+D+ LTD G Sbjct: 522 GAPPGYIGYEEGGLLTETIRKHPYTVLLLDEIEKAHPDLINILLQVMDNATLTDNNGNVA 581 Query: 708 DFRNTVVIMTSNLGSD------LIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVV 761 DF++ V+IMTSN+G+ QE + D A + F PEF NR+D +V Sbjct: 582 DFKHVVLIMTSNVGATEANVMGFKQESVSKFDEA---------LKQYFTPEFRNRLDAIV 632 Query: 762 VFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAI 821 F PL ++ + I + L +L+ + + ++ +A K L++ GY P GARPL R I Sbjct: 633 RFRPLSQEIVEGIVDKFIAELNDQLDNKSITLSLTPKAKKYLAQKGYSPELGARPLARVI 692 Query: 822 QQQIENPLAQQILSGELVPGKVIRLE 847 ++I+ PL +IL G+L G ++++ Sbjct: 693 SEEIKTPLTNEILFGKLRHGGKVKID 718 >UniRef50_B7GCV2 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7GCV2_PHATR Length = 683 Score = 310 bits (793), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 155/326 (47%), Positives = 227/326 (69%), Gaps = 13/326 (3%) Query: 530 KVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA 589 +VT+ +A V++ W+GIP+ ++ E ++L +E E+ RV GQ A+ V+ A+RR+R+ Sbjct: 347 EVTEHTVAMVISEWSGIPMGKLETQEMDRLQALEGEMGRRVKGQGRAIRGVARAVRRARS 406 Query: 590 GLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGA 649 GL DP RP+ SFLF GPTG GKTELCK LA + S++ M+RIDMSE+MEKHSVSRL G Sbjct: 407 GLRDPRRPVASFLFCGPTGTGKTELCKTLAETYYGSEKDMIRIDMSEYMEKHSVSRLTGP 466 Query: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709 PPGY+GYEEGG LTEAVRR P+SV+LLDE+EKAH DV NILLQV++DG LTDG+GRT++F Sbjct: 467 PPGYIGYEEGGQLTEAVRRAPHSVVLLDELEKAHGDVLNILLQVMEDGMLTDGKGRTINF 526 Query: 710 RNTVVIMTSNLGSDLIQE--RFG--------ELDYAHMKELVLGVVSHNFRPEFINRIDE 759 +N++++MTSN+GS I E R G YA + ++V + +PE +NRIDE Sbjct: 527 KNSILVMTSNVGSRRILEVARSGRDSIVQKDHYLYAELAQVVKEELEREMKPELLNRIDE 586 Query: 760 VVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEAL-KLLSENGYDP-VYGARP 816 ++VF PL + IA++ + ++ +R L+E+ E+ I + ++++E + +GARP Sbjct: 587 IIVFSPLSTGDLWMIAELIVAKISERALKEQKLELKIDRSVIERVMAEGSANADQFGARP 646 Query: 817 LKRAIQQQIENPLAQQILSGELVPGK 842 ++RA Q+ +E+ L+ I+ G L G+ Sbjct: 647 MRRAAQRFVEDSLSDAIIQGFLQEGE 672 Score = 284 bits (727), Expect = 9e-75, Method: Compositional matrix adjust. Identities = 163/330 (49%), Positives = 213/330 (64%), Gaps = 15/330 (4%) Query: 85 QDLVRVLNLCDKLAQKRGDNFISSELFVLAALE-SRGTLADILKAA----GATTANITQA 139 +DL R L KLA + G + S+ LA LE S G A ++K T ++ ++ Sbjct: 4 KDLKRTLVQAGKLADQMGSTTVGSQHVFLALLEYSEGGWAVLVKMNVLDDTVTALDVCES 63 Query: 140 IEQMRGG-------ESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQ 192 + Q E V G + L + +DLT++AE G LDPV GRD+E R ++ Sbjct: 64 LLQNMADQPDQARRELVTGAGGSGKMPTLTECGVDLTQQAEDGLLDPVYGRDDETRACVR 123 Query: 193 VLQRRTKNNPVLIGEP-GVGKTAIVEGLAQRIINGEV-PEGLKGRRVLALDMGALVAGAK 250 L RR KNN LIGEP GVGKTAI EG+AQ +++ ++ P LKG R+ +L++ LVAG K Sbjct: 124 TLIRRRKNNVCLIGEPVGVGKTAIAEGVAQILVDEKLCPARLKGHRLFSLELSNLVAGTK 183 Query: 251 YRGEFEERLKGVLNDLAKQEGN-VILFIDELHTMVGAGKADGAMDAGNMLKPALARGELH 309 YRGEFEERL+ ++ ++ + ILFIDE+H +VGAG A+G MDA N+LKPALARGEL Sbjct: 184 YRGEFEERLQSIIKEVTDPKAPPTILFIDEIHNLVGAGAAEGGMDAANLLKPALARGELQ 243 Query: 310 CVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPA 369 +GATT+ EYR+YIEKDAALERR Q V V EPSV TI IL+ ++ YE HH V T A Sbjct: 244 LIGATTIMEYRKYIEKDAALERRLQPVMVKEPSVVQTIDILQAVQSNYEKHHGVTYTSAA 303 Query: 370 IVAAATLSHRYIADRQLPDKAIDLIDEAAS 399 + AAATLS RY+ DR LPDKA+DL+DEA + Sbjct: 304 LNAAATLSDRYMTDRFLPDKALDLLDEAGA 333 >UniRef50_Q1IZ22 ATPase AAA-2 n=8 Tax=Deinococci RepID=Q1IZ22_DEIGD Length = 745 Score = 310 bits (793), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 181/395 (45%), Positives = 246/395 (62%), Gaps = 28/395 (7%) Query: 22 LGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQALNRLPQVEGTGGDV 81 LGH + P HL+ L+ +EGG+ + +L+ G + LR + + + R G G + Sbjct: 22 LGH--AMVGPEHLLLGLM-REGGTAATILSEFGASLDGLRRRVEEIIGR-----GEGNRL 73 Query: 82 QPSQDLV----RVLNLCDKLAQKRGDNFISSELFVLAAL-ESRGTLADILKAAGATTANI 136 + + RV+ L A+ G S+E +L + E G IL+ + Sbjct: 74 NDAPSITPRARRVMELASAEARSLGAQVTSTEHILLGIIREGDGVAFRILQ-------EL 126 Query: 137 TQAIEQMRG-----GESVNDQGAED-QRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRT 190 T+ ++ +R G+ + + A+ L +Y DLT++A +GKLDPVIGR EEIRR Sbjct: 127 TKDVDTIRWRVLAQGDGSSGKAAKPVATPFLDEYGRDLTKQAREGKLDPVIGRSEEIRRV 186 Query: 191 IQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAK 250 Q+L RRTKNNPVLIG+PGVGKTAIVEGLA I P L G R+++LD+ +VAG K Sbjct: 187 TQILTRRTKNNPVLIGDPGVGKTAIVEGLALAIFEKRTPPNLHGVRLVSLDLSGVVAGTK 246 Query: 251 YRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHC 310 YRGEFEERL+ ++ +L + V+ FIDELHT+VGAG A+G +DA N+LKPAL+RGE+ Sbjct: 247 YRGEFEERLRQIIEEL--RNAKVMAFIDELHTLVGAGGAEGTLDAANILKPALSRGEIQV 304 Query: 311 VGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAI 370 +GATT EY +YIEKDAALERRFQ V V EPS +T+ ILRGL+ RYE HH VQI + A+ Sbjct: 305 IGATTTGEYHRYIEKDAALERRFQPVIVLEPSPAETLQILRGLRPRYEEHHGVQIPESAL 364 Query: 371 VAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQI 405 A + R + R PDKAIDLIDEAAS +R+ + Sbjct: 365 ELAVRIGERSLPGRNFPDKAIDLIDEAASRVRLNM 399 Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 139/303 (45%), Positives = 208/303 (68%), Gaps = 16/303 (5%) Query: 558 KLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKA 617 +L +E++L +V GQ EA+ A+S+A+RR+R GL R SFLF+GP+GVGKT L KA Sbjct: 438 QLSDLEEQLQEQVYGQPEAIKALSSALRRARVGLGGRTRVSASFLFVGPSGVGKTHLAKA 497 Query: 618 LANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLD 677 LA +F S+ +++R+DMSEF E HS+S+L+G+PPGYVG+E+GG LTEAVRR+P+SVILLD Sbjct: 498 LAKTLFGSERSLIRVDMSEFQEAHSISKLIGSPPGYVGFEQGGRLTEAVRRQPFSVILLD 557 Query: 678 EVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHM 737 E+EKAHPDV+N LQVLDDGRLTDG GRTVDFR T++IMTSN G ++ + ++ + Sbjct: 558 EIEKAHPDVYNTFLQVLDDGRLTDGLGRTVDFRRTIIIMTSNTGFNVNP----TVGFSPV 613 Query: 738 KELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHIS- 796 + + F PEF++R+D+V+ F PLGE + +AQ L + + L R E++++ Sbjct: 614 TPDNNAPLRNIFTPEFLDRLDDVIRFRPLGEDELVRVAQQLLGEMREELASR--ELNVTF 671 Query: 797 DEAL------KLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNE 850 D A+ KL + + V +R L+ ++++IE+PLA +++ G+ +R+ + + Sbjct: 672 DPAIAAWLVSKLKARSPKHAVGSSRQLRTLLREEIEDPLALELIGNA---GEELRVVLGQ 728 Query: 851 DRI 853 D I Sbjct: 729 DGI 731 >UniRef50_A9FU98 Endopeptidase ATPase with chaperone activity,two ATP-bindingdomains n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FU98_SORC5 Length = 945 Score = 308 bits (788), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 163/321 (50%), Positives = 211/321 (65%), Gaps = 13/321 (4%) Query: 530 KVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA 589 +V AE+AEV++ +PV R++E++RE++L +E L V+G EA+ ++ +RR+ A Sbjct: 593 QVGPAEVAEVVSELADLPVERLLETDRERMLSLETLLAENVVGHGEALSRIARVLRRNAA 652 Query: 590 GLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGA 649 GL RPIGSFL LGPTGVGKTE KA+A +F S +AM R+D SE+ E H+V+RLVGA Sbjct: 653 GL-RARRPIGSFLLLGPTGVGKTETAKAIAEALFHSPDAMTRLDFSEYAESHAVARLVGA 711 Query: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709 PPGYVG+E GG LTEAVRRRPY V+LLDE+EKAH DV LQV D+GRLTDG+GR VDF Sbjct: 712 PPGYVGHEAGGQLTEAVRRRPYQVVLLDEIEKAHRDVLEAFLQVFDEGRLTDGRGRRVDF 771 Query: 710 RNTVVIMTSNLGS----DLIQER---FGELDYA----HMKELVLGVVSHNFRPEFINRID 758 NTV++MTSNLG+ L ER F A + E +L PE NRID Sbjct: 772 TNTVLVMTSNLGAAEAGALRSERSVGFARSSSAVSPERLGETMLSAARAALPPELYNRID 831 Query: 759 EVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEAL-KLLSENGYDPVYGARPL 817 EV+ F PL +A I + L L + LE RG E+ + EA+ LL G+DP GARP+ Sbjct: 832 EVLCFAPLTRADVAEITRRLLGGLERELEARGVELEVEPEAIDALLDAGGFDPELGARPM 891 Query: 818 KRAIQQQIENPLAQQILSGEL 838 KR I + +E PLA+ IL G+L Sbjct: 892 KRTIARLVEAPLAELILRGQL 912 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 94/236 (39%), Positives = 136/236 (57%), Gaps = 7/236 (2%) Query: 160 ALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGL 219 AL +L+ A QG+L+P++GR+ EI + + VL +R NNP L+G GVGKT++ G+ Sbjct: 326 ALASLGHNLSLAAVQGELEPIVGREHEIEQALDVLAKRHANNPCLLGPAGVGKTSVARGV 385 Query: 220 AQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDE 279 A R+ E + R V+ L L+AG RG ERL + +++ + G VILFID Sbjct: 386 AHRLAFDE----REPRVVVELVPSELLAGTGARGALSERLSALRSEVREAGGRVILFIDG 441 Query: 280 LHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVA 339 L + G+G D AM +K ALARGEL +G T +EYR+ IE D AL RRF V + Sbjct: 442 LSELFGSGALDEAM---AEIKLALARGELTMIGTATPEEYRKSIEVDPALARRFTIVEID 498 Query: 340 EPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLID 395 EP ++ +L+ + HH + TD A+ +A S RY+ R LPDKA+ ++D Sbjct: 499 EPEEDEAFLLLQSVAVGLGAHHGLAFTDEALASAVAWSVRYLPGRALPDKALSILD 554 >UniRef50_A8SAZ3 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAZ3_9FIRM Length = 765 Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 152/320 (47%), Positives = 215/320 (67%), Gaps = 9/320 (2%) Query: 531 VTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590 +T +IA V+A +G+P R+ E ERE+L ++E L+ ++GQ AV AV+ AIRRSR G Sbjct: 425 LTPEDIARVVAAASGVPAQRVGEQERERLDKLESRLNAEIVGQQRAVAAVAGAIRRSRTG 484 Query: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAP 650 L +P RPIG+ LFLGPTGVGKT L +ALA F S++A+++ DMSE+ E+H+ +RL+GAP Sbjct: 485 LGEPGRPIGAMLFLGPTGVGKTALARALAVSWFGSEKALLKFDMSEYQEQHTAARLLGAP 544 Query: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFR 710 PGY+G++EGG LTEAVRRRPYSV+L DE+EKAHPD+ NILLQ+L+DG+LTD GR DFR Sbjct: 545 PGYLGHDEGGQLTEAVRRRPYSVVLFDEIEKAHPDIQNILLQILEDGQLTDAMGRKADFR 604 Query: 711 NTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHN--------FRPEFINRIDEVVV 762 NT+V++TSNLG+ + + L +A E V S FRPE + R+DEV+V Sbjct: 605 NTIVLLTSNLGARFLAGQNAPLGFAAGAEAVFEKQSAQAVEEAKKWFRPELLGRLDEVIV 664 Query: 763 FHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQ 822 F PL E+++ +IA+ L +L +R GY + + + + YGAR L+R + Sbjct: 665 FRPLAEENLCAIAEKMLCQLEQRAARSGYRLRHTPQ-VGAALAARAQSAYGARELRRQVD 723 Query: 823 QQIENPLAQQILSGELVPGK 842 + +E LA +I +G G+ Sbjct: 724 RAVEQALANRIAAGTACVGQ 743 Score = 290 bits (741), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 176/380 (46%), Positives = 234/380 (61%), Gaps = 17/380 (4%) Query: 33 HLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQALNRLPQVEGTGG--DVQP-SQDLVR 89 HL+ A+L Q+G + LT I ++R + Q Q G D Q + DL R Sbjct: 42 HLLLAMLQQQGAAAQ-FLTRKNITEPEVRRQLAQ------QRSGPAQRLDRQSMAPDLRR 94 Query: 90 VLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKA-AGATTANITQAIEQMRGGES 148 ++ AQ + E + A LE G A +L A G + + Q+ G Sbjct: 95 TMDYALIGAQNAHVSRAEPEHLLCAMLEDDGCAAGLLLAEMGLSLTEAVRECRQLSGQFV 154 Query: 149 VNDQ---GAEDQR--QALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPV 203 + Q A R +A KY DLT RA +G+LDPV R+ E+ R +++L RR KN+P Sbjct: 155 LPAQPRVSASIPRGSRASDKYCRDLTRRAAEGELDPVFCREAELDRMVEILCRRQKNDPC 214 Query: 204 LIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVL 263 LIGEPGVGKTA+ EGLA RI G+VP L+GRR+LALDM +LVAG KYRG+FEERLK +L Sbjct: 215 LIGEPGVGKTALAEGLALRIAAGQVPRALQGRRLLALDMASLVAGTKYRGDFEERLKNLL 274 Query: 264 NDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYI 323 +L + +G ILFIDE HT+VGAG A+GA+DA ++LKP LARGEL +GATT E+R +I Sbjct: 275 EELVR-DGTAILFIDEFHTIVGAGAAEGAIDAASILKPVLARGELQLIGATTNQEFRTHI 333 Query: 324 EKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIAD 383 +KDAALERRF +V V EP+ + IL GL RYE +H+V++ + AA LS RY+ Sbjct: 334 QKDAALERRFGRVQVEEPTPAQAVEILNGLAPRYERYHNVRLPPQTLQAAVELSVRYLPG 393 Query: 384 RQLPDKAIDLIDEAASSIRM 403 R LPDKAIDL+DEA ++ R+ Sbjct: 394 RCLPDKAIDLVDEACAAARI 413 >UniRef50_Q4U8P5 Endopeptidase (CLP homologue) ATP-binding chain, putative n=2 Tax=Theileria RepID=Q4U8P5_THEAN Length = 916 Score = 305 bits (782), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 151/341 (44%), Positives = 218/341 (63%), Gaps = 14/341 (4%) Query: 530 KVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA 589 +V +AEV++ WTGIP+ ++ E E + ME++LH VIGQ EAV V AIRR++ Sbjct: 551 QVKPEHVAEVMSIWTGIPLKKLTRGEMEIIRNMEEDLHKMVIGQEEAVKNVCKAIRRAKT 610 Query: 590 GLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGA 649 + +PNRPIGSFLF GP GVGK+E+ +AL ++F + E ++RIDMSE+ E HS+SR++G+ Sbjct: 611 NIKNPNRPIGSFLFCGPPGVGKSEVARALTKYLF-AKENLIRIDMSEYTEPHSISRILGS 669 Query: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709 PPGY G++ GG LTE V+ PYSV++ DE+EKAH DV NILLQ+L+DG+LTD + +T+ F Sbjct: 670 PPGYKGHDTGGQLTEKVKSNPYSVVMFDEIEKAHHDVLNILLQILEDGKLTDSKNQTISF 729 Query: 710 RNTVVIMTSNLGSDLIQ------ERFG-------ELDYAHMKELVLGVVSHNFRPEFINR 756 +NT++IMTSN GS++IQ FG DY +K LV+ + +F PE INR Sbjct: 730 KNTIIIMTSNTGSNVIQRSSKGVHTFGFTVDSDESSDYLKIKALVMEELKSHFLPELINR 789 Query: 757 IDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARP 816 ID+V++F PL E + IA++ L L R G I IS++ + + D GARP Sbjct: 790 IDDVILFKPLSESELKEIAKLMLNDLTARANSAGILIEISEKFADYILKLPRDDKSGARP 849 Query: 817 LKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857 L+R I +E+ LA ++S + + V+E V + Sbjct: 850 LRRLITSVLEDKLADLVISDDFDSNNTYTVTVDEADSVVIN 890 Score = 251 bits (641), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 150/413 (36%), Positives = 221/413 (53%), Gaps = 41/413 (9%) Query: 29 IEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQALNRLPQVEGTGGDVQP--SQD 86 +E H+ L+ G +L G+ R N A + P E P S Sbjct: 97 VESAHIFQGLVCLNQGLAFKILKEFGVTVNSAR---NAAKSSYPVDESKKVKNLPTFSNS 153 Query: 87 LVRVLNLCDKLAQKRGDNFISSELFVLAAL-ESRGTLADILKA-------AGATTANITQ 138 L+ A++ G++ I +E +L L ++ ++ K A TT + Sbjct: 154 AKNALDYSSTEAERLGNSTIETEHLLLGVLNDTTKEMSTFYKNLDLDVTLAIDTTVRTIE 213 Query: 139 AIEQMRGGESVNDQGAEDQ----------------RQALKKYTIDLTERAEQGKLDPVIG 182 I++++ S+++ E + + +T+DLTE+A G+L VI Sbjct: 214 KIKEIKESNSLSENIQESSPNFVYLSPTMNRDELAQSCISLFTVDLTEKARNGQLPKVIH 273 Query: 183 RDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDM 242 RD EI R I L R TK+NP+L+GEPGVGKTAIVEG+A +I G + +R+L L Sbjct: 274 RDNEIERAIITLSRMTKSNPLLVGEPGVGKTAIVEGIANKISQGISQPQISKKRILQLQF 333 Query: 243 GALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVG-----------AGKADG 291 G L+AG K+RG+FEERL +++++ K G++IL IDE H ++G AG DG Sbjct: 334 GLLIAGTKFRGQFEERLTKLIDEI-KSSGDIILVIDEAHMLIGMKFIYNNNKLGAGAGDG 392 Query: 292 AMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILR 351 ++DA N+LKP L+RGE+ C+ TT EY++Y EKD AL RRF ++V EPS EDT+ IL Sbjct: 393 SIDAANLLKPPLSRGEIQCIAITTPKEYKKYFEKDMALSRRFHPIYVDEPSEEDTLKILN 452 Query: 352 GLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQ 404 G+ Y H V+ T +I A S +YI DR LPDKAID++DE+ S ++Q Sbjct: 453 GISSSYGEFHGVEYTQESIKLALKYSKQYINDRFLPDKAIDIMDESGSFAKIQ 505 >UniRef50_D2KTB1 BC18 (Fragment) n=1 Tax=Babesia caballi RepID=D2KTB1_BABCB Length = 1037 Score = 305 bits (781), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 147/335 (43%), Positives = 221/335 (65%), Gaps = 17/335 (5%) Query: 536 IAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPN 595 +AEV++ WTGIP+ ++ E E E + ME+E+H ++G EAV+ + AIRR+ A + DP+ Sbjct: 660 VAEVVSTWTGIPLKKLSEDELEAMRNMEREIHKSIVGHEEAVEHICKAIRRATAKIKDPD 719 Query: 596 RPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVG 655 RPIGSFLF GP GVGK+E+ KAL F+F + E ++++DMSE+ E HS+SR++G+PPGY G Sbjct: 720 RPIGSFLFCGPPGVGKSEIAKALTKFLF-AKENLIKLDMSEYNEPHSISRILGSPPGYKG 778 Query: 656 YEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVI 715 ++ GG LTE +R+ PYSV++ DE+EKAH DV N+LLQ+L+DG+LTD + + V F+N V+I Sbjct: 779 HDAGGQLTEKLRKSPYSVVMFDEIEKAHRDVLNLLLQILEDGKLTDSRNQVVSFKNAVII 838 Query: 716 MTSNLGSDLIQ------ERFG----------ELDYAHMKELVLGVVSHNFRPEFINRIDE 759 MTSNLGS++I+ FG + +Y +K LV + F+PE I+RID+ Sbjct: 839 MTSNLGSNVIERASRGVHAFGFNVEEKVTDPKENYTKIKALVCEELKSQFKPELIDRIDD 898 Query: 760 VVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKR 819 +++F PL EQ + IA + ++ KR E G+ + D + + + D GARPL+R Sbjct: 899 IILFRPLEEQQLRQIAVLMIEETVKRARENGFSVVADDAFVDYVLKLPRDEKGGARPLRR 958 Query: 820 AIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIV 854 I +E+ LA+ +S E VPG+ R+ V +V Sbjct: 959 LITTSLEDKLAEFFISQEYVPGQRYRVTVEGTNVV 993 Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 133/248 (53%), Positives = 177/248 (71%), Gaps = 1/248 (0%) Query: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220 L +T+DLTE+AEQGKL V+ RD EI R I+ L RR K NP+LIGEPGVGKTA+VEGLA Sbjct: 284 LGAFTVDLTEKAEQGKLQKVLCRDAEIDRAIRTLCRRHKRNPILIGEPGVGKTAVVEGLA 343 Query: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280 ++++G + L+ +RV LD+G +VAGA++RG+FEERL ++ ++ K G+VIL IDE Sbjct: 344 MQLLDGAMVPSLRNKRVKQLDIGLMVAGARFRGQFEERLTKLIEEV-KAMGDVILVIDEA 402 Query: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340 H +VGAG +GA+DA N+LKP+LARGE+ C+ TT EYR+Y EKD AL RRFQ ++V E Sbjct: 403 HMLVGAGAGEGALDAANLLKPSLARGEIQCIAITTPREYRKYFEKDPALSRRFQPIYVNE 462 Query: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400 PS EDT I+ E Y H V+ A+VAA S ++I DR LPDKA+D++DEA S Sbjct: 463 PSDEDTKKIIAATTESYGRFHRVKYDPKAVVAALKYSKQFIQDRFLPDKALDILDEAGSL 522 Query: 401 IRMQIDSK 408 +M+ K Sbjct: 523 AKMRFYEK 530 >UniRef50_B8BXC6 Member of the clp superfamily, regulatory gamma subunit n=1 Tax=Thalassiosira pseudonana RepID=B8BXC6_THAPS Length = 890 Score = 305 bits (780), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 151/327 (46%), Positives = 220/327 (67%), Gaps = 18/327 (5%) Query: 530 KVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA 589 +VTD +I+ ++++WT IP+ ++ +E LL +E L RV GQ A+ +++ A+RR+R+ Sbjct: 495 EVTDQDISSIISQWTNIPIGKLTSTESSTLLTLESSLASRVKGQERAIKSIARAVRRARS 554 Query: 590 GLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGA 649 GL D RP+ SFLF G TGVGKT L K+LA + S++ MVRIDMSE+MEKH+ SRL G Sbjct: 555 GLRDAGRPVASFLFCGSTGVGKTWLAKSLAAQYYGSEKDMVRIDMSEYMEKHTASRLTGP 614 Query: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709 PPGYVGYEEGG LTEAVRR P+SV+LLDE+EKAH DV N+LLQV++DG LTDG+GRT+ F Sbjct: 615 PPGYVGYEEGGQLTEAVRRAPHSVVLLDEIEKAHRDVLNVLLQVMEDGVLTDGKGRTICF 674 Query: 710 RNTVVIMTSNLGS----DLIQERFGEL-----------DYAHMKELVLGVVSHNFRPEFI 754 +N +++MTSN+GS +L+ GE DYA + E+V ++ +PE + Sbjct: 675 KNVILVMTSNVGSAKIMELVNGDAGEFDSDTTSLDAAEDYAALSEVVQEELTKEMKPELL 734 Query: 755 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALKLLSENGYDPV-- 811 NRIDE++VF PLG++++ IA+ + +R +ER + SD + + +G Sbjct: 735 NRIDEIIVFSPLGDENLRDIAKAIVDASIERAFKERSITLSASDSLIDAVVMDGSMNAAE 794 Query: 812 YGARPLKRAIQQQIENPLAQQILSGEL 838 +GARP++RA Q+ E+ ++ I+ G L Sbjct: 795 FGARPMRRAAQRLFEDAVSDAIVRGFL 821 Score = 286 bits (731), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 156/329 (47%), Positives = 212/329 (64%), Gaps = 11/329 (3%) Query: 87 LVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAGAT---TANITQAIEQM 143 L RVL +A ++SE +LA +E G + AA +I E M Sbjct: 164 LKRVLTFAGAIADSLDSPTVNSEHVLLALME--GVDSTTFSAAEFCRRLVMDIKYPNEPM 221 Query: 144 --RGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNN 201 G + V+ G E L + +DLT+ A + +LDPV GRDEE+R ++ L RR KNN Sbjct: 222 VGEGPQLVSGNGGELSTPTLSEVGVDLTDLAARMELDPVHGRDEEVRAALRTLVRRRKNN 281 Query: 202 PVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKG 261 P L+GEPGVGKTAI EG+AQ + P L+ R+++L++ LVAG KYRGEFEERL+ Sbjct: 282 PCLMGEPGVGKTAIAEGVAQIL---AAPNMLRNHRIISLELANLVAGTKYRGEFEERLQA 338 Query: 262 VLNDLAKQEGN-VILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYR 320 ++ ++ + ILFIDE+HT+VGAG A+G +DA NMLKPALARG+L +GATT+ EYR Sbjct: 339 IVEEVTDERAPPTILFIDEIHTLVGAGSAEGGIDAANMLKPALARGKLQVIGATTISEYR 398 Query: 321 QYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRY 380 +YIEKDAALERR Q + V EP+++ T+ IL + E+Y HH V+ T ++VAAA LS RY Sbjct: 399 KYIEKDAALERRLQPLMVKEPTIDQTVQILEAIAEQYGAHHGVRYTPESLVAAAKLSERY 458 Query: 381 IADRQLPDKAIDLIDEAASSIRMQIDSKP 409 + DR LPDKAIDL+DEA +S+ ++ P Sbjct: 459 VTDRFLPDKAIDLLDEAGASVHIEHAFNP 487 >UniRef50_A6QBZ7 ATP-dependent Clp protease, ATP-binding subunit ClpA n=3 Tax=Epsilonproteobacteria RepID=A6QBZ7_SULNB Length = 729 Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 150/305 (49%), Positives = 221/305 (72%), Gaps = 9/305 (2%) Query: 125 ILKAAGATTANITQAIEQMR--GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIG 182 ++K G +I + I R ++ D+ A+++ L+++T++L A+ GK+DPV+G Sbjct: 120 LMKKEGIARVDILEVISHNREDHAQTETDKSAKEE-TVLEQFTMELVALAKTGKIDPVVG 178 Query: 183 RDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDM 242 R +EI R +Q L RR KNNP+L+GEPGVGKTAI EGLA +I G+VP+ +K +V ALDM Sbjct: 179 RVDEINRVMQTLCRRKKNNPLLVGEPGVGKTAIAEGLALKISEGDVPDVIKDAKVYALDM 238 Query: 243 GALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAG-KADGAMDAGNMLKP 301 GAL+AG KYRG+FE+RLKG++N+L++ + + ILFIDE+HTMVGAG + G+MDA N+LKP Sbjct: 239 GALIAGTKYRGDFEKRLKGIINELSQMD-DAILFIDEIHTMVGAGATSGGSMDASNLLKP 297 Query: 302 ALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHH 361 ALARG+L C+GATT EYR + +KD AL RRF K+ V EPSVEDT IL+G++ +YE HH Sbjct: 298 ALARGDLKCIGATTYAEYRNFFDKDKALSRRFAKIDVEEPSVEDTFTILKGVQHKYEDHH 357 Query: 362 HVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQ----IDSKPEELDRLDR 417 +++ TD A+ +A LS +Y+ DR LPDKA+D+IDE + ++ + KP++++ Sbjct: 358 NIKFTDEALQSAIDLSVKYLHDRFLPDKAMDIIDEVGAHFMLKGAEGVIVKPKDIEESVA 417 Query: 418 RIIQL 422 ++++L Sbjct: 418 KMMKL 422 Score = 278 bits (712), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 141/316 (44%), Positives = 206/316 (65%), Gaps = 6/316 (1%) Query: 531 VTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590 V +I E +A+ +P + + + +KL +E++L +IGQNEA++ ++ AI+RS AG Sbjct: 407 VKPKDIEESVAKMMKLPSTVIGTDDTKKLKTLEKDLSAHIIGQNEAIEELATAIKRSYAG 466 Query: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAP 650 L PNRPIGSFLF+GPTGVGKT L LA M E RIDMSE+ME H++SRLVGAP Sbjct: 467 LNAPNRPIGSFLFVGPTGVGKTALATQLAETMHVHFE---RIDMSEYMEAHTISRLVGAP 523 Query: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFR 710 PGYVGYE+GG LTE +++ P++V+LLDE+EKAHPD+ NILLQV+D +LTD G DF+ Sbjct: 524 PGYVGYEQGGLLTEMIKKHPHTVLLLDEIEKAHPDIMNILLQVMDGAKLTDNNGVVSDFK 583 Query: 711 NTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQH 770 N ++IMTSN+G+ D + + L F PEF+NR+ VV F+ L + Sbjct: 584 NVILIMTSNIGTKEANVMGFNKDNSMKTDKALKAF---FAPEFMNRLSAVVEFNTLDLET 640 Query: 771 IASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLA 830 + SI ++L +L L+ + ++ +S +A + L+ GYD YGAR + R I ++I+ L Sbjct: 641 LVSIVDVELDKLNLMLKPKNIKVKVSKKAKEYLANEGYDERYGARHIARVIDEKIKEALT 700 Query: 831 QQILSGELVPGKVIRL 846 ++IL G L G ++++ Sbjct: 701 EEILFGRLKKGGLVKV 716 >UniRef50_B6KIW5 Heat shock protein, putative n=3 Tax=Toxoplasma gondii RepID=B6KIW5_TOXGO Length = 983 Score = 302 bits (774), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 167/375 (44%), Positives = 237/375 (63%), Gaps = 7/375 (1%) Query: 32 LHLMSALLNQEGGSVSPL-LTSAGINAGQLRTDINQALNRLPQ--VEGTGGDVQPSQDLV 88 +HL++ LL+ G + P L AG + LR D++ L R+PQ + G+ + +L Sbjct: 126 VHLVACLLDMPGDTTVPTALEKAGGKSADLRKDMHNLLIRMPQSVTPLSYGEARSRSELK 185 Query: 89 RVLNLCDKLAQKRGDNFISSELFVLAALES---RGTLADILKAAGATTANITQA-IEQMR 144 RV+ AQ RG + V A R LA++ +T A I Sbjct: 186 RVIIDAYNEAQSRGHRLVGVHDLVTALARCDRFRARLANVGTDVSVFLKLVTSAFIVHTE 245 Query: 145 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204 E ++ +K + +D+TE+A++GK+ V GR+ EI + V+ R +K N +L Sbjct: 246 AEERKATPARTGSQEWIKTFGVDMTEQAKEGKIGTVTGREAEIEQITSVMSRMSKANCLL 305 Query: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264 IGEPGVGKTA+VEGLA+RI++G+VP+ L G +V +LD+G+L++G+ RGEFE R+KG+L+ Sbjct: 306 IGEPGVGKTAVVEGLAKRIVDGDVPDALLGVQVFSLDVGSLLSGSSMRGEFERRMKGILD 365 Query: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324 L + + ILFIDE+HT++GAGKADG MDA N+LKPALARG L +GATT EYR++IE Sbjct: 366 YLFASDRSTILFIDEIHTLMGAGKADGPMDAANLLKPALARGALRVIGATTRAEYRKHIE 425 Query: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384 +D A RRF + + EP V TI +L+G+++ E HH + ITD A+VAAATLS RYI R Sbjct: 426 RDMAFARRFVTIEMKEPDVAKTITMLKGIRKNLENHHKLTITDGALVAAATLSDRYIKSR 485 Query: 385 QLPDKAIDLIDEAAS 399 QLPDKAIDLID+A + Sbjct: 486 QLPDKAIDLIDDACA 500 Score = 249 bits (635), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 117/197 (59%), Positives = 159/197 (80%) Query: 529 NKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSR 588 + +TDA++A+V++ TGIPV+++ E++R++LL + L +VIGQ EAV+AV+NAI RSR Sbjct: 559 DALTDADVADVVSLRTGIPVNKLTETDRQRLLSLPASLQAQVIGQEEAVEAVANAIIRSR 618 Query: 589 AGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVG 648 AGLA N PIG+FLFLG TGVGKTEL KAL +F ++ ++R+DMSE+ E H+V+RLVG Sbjct: 619 AGLARRNAPIGTFLFLGSTGVGKTELAKALTAAIFHDEKNLIRLDMSEYSEPHTVARLVG 678 Query: 649 APPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVD 708 +PPGYV ++EGG LTEAVR+RP+SV+L DE+E AHP+VF LLQ+LD+GRLTD +G TVD Sbjct: 679 SPPGYVSHDEGGQLTEAVRQRPHSVVLFDEIENAHPNVFAYLLQLLDEGRLTDMRGITVD 738 Query: 709 FRNTVVIMTSNLGSDLI 725 F N V+I TSN+G+ I Sbjct: 739 FTNCVIIATSNIGAKHI 755 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/104 (34%), Positives = 60/104 (57%), Gaps = 1/104 (0%) Query: 749 FRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGY 808 F+P+ +NR+ V++F PL Q + I ++Q K L L E+ ++ + ++A+ + E Y Sbjct: 838 FKPQVLNRM-TVIIFDPLTPQDLKRIFRLQQKGLADLLSEQRIDLVVEEDAVTFVVERAY 896 Query: 809 DPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDR 852 +GAR LKR + I LA ILSG L G ++R+ V++ R Sbjct: 897 SRHFGARRLKRFFDKNITGRLAPWILSGWLRSGMMLRIIVSKTR 940 >UniRef50_A3DES0 ATP-dependent Clp protease ATP-binding subunit ClpA n=4 Tax=Clostridium RepID=A3DES0_CLOTH Length = 776 Score = 301 bits (771), Expect = 7e-80, Method: Compositional matrix adjust. Identities = 141/245 (57%), Positives = 192/245 (78%), Gaps = 2/245 (0%) Query: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220 L+ +TIDLTE+A +GK+DP+IGR++ + RTIQVL RR KNNP+ +G+PGVGKTAI EGLA Sbjct: 195 LEHFTIDLTEKARKGKIDPLIGREDILERTIQVLSRRLKNNPIHVGDPGVGKTAITEGLA 254 Query: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280 + I+ +VP+ LKG ++ LDMG+++AG KYRG+FEER+K VLN++ Q I++IDE+ Sbjct: 255 RLIVEDKVPKSLKGSKIYYLDMGSMLAGTKYRGDFEERIKKVLNEIQNQP-KAIVYIDEI 313 Query: 281 HTMVGAGK-ADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVA 339 HT+VGAG +DGAMDA N++KP L +G L +G+TT +EY++Y EKD AL RRFQK+ V Sbjct: 314 HTIVGAGAVSDGAMDASNIIKPFLTQGTLRFIGSTTYEEYKKYFEKDRALSRRFQKIDVP 373 Query: 340 EPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAAS 399 EPS++DT IL+GLK+RYE +H V+ TD A+ AA LS +YI DR LPDKAID+IDE + Sbjct: 374 EPSIDDTFKILKGLKDRYEEYHKVKYTDSALRLAAELSAKYIQDRHLPDKAIDVIDETGA 433 Query: 400 SIRMQ 404 +R+ Sbjct: 434 YVRLH 438 Score = 259 bits (661), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 125/312 (40%), Positives = 197/312 (63%), Gaps = 4/312 (1%) Query: 531 VTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590 + + +I ++ IP+ + E KL ++ +L + GQ++A+D V AI+RSRAG Sbjct: 448 IKNKDIERTVSAIARIPIQSVSRDEISKLKNLDVKLKSTIFGQDKAIDTVVQAIKRSRAG 507 Query: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAP 650 + +P+ S LF+GPTGVGKTEL K L+ + +R DMSE+ EKH+VSRL+GAP Sbjct: 508 FNENEKPVASLLFVGPTGVGKTELAKQLSLHL---GIPFIRFDMSEYQEKHTVSRLIGAP 564 Query: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFR 710 PGYVGYEEGG LT+A+R+ P+ V+LLDE+EKAHPD++N+LLQV+D LTD G+ DFR Sbjct: 565 PGYVGYEEGGLLTDAIRKTPHCVLLLDEIEKAHPDIYNVLLQVMDYAVLTDNNGKKADFR 624 Query: 711 NTVVIMTSNLGSDLIQERFGELDYAHM-KELVLGVVSHNFRPEFINRIDEVVVFHPLGEQ 769 N ++IMTSN G+ + D ++ + + V F PEF NR+D++VVF+ + E+ Sbjct: 625 NVILIMTSNAGAREVGRTLIGFDSRNVDRSAMTKEVERIFSPEFRNRLDDIVVFNHINEE 684 Query: 770 HIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPL 829 I + + + ++L+ + ++ +++ K +++ G +YGAR + R +Q +I+ Sbjct: 685 MALLITKKAINQFKEKLKTKNIKLKVTERCCKWIAQKGLSSIYGAREILRYVQDKIKTYF 744 Query: 830 AQQILSGELVPG 841 ++L GEL G Sbjct: 745 VDEVLFGELSKG 756 >UniRef50_Q2T6Y8 ATP-dependent Clp protease, ATP-binding subunit ClpB n=5 Tax=Proteobacteria RepID=Q2T6Y8_BURTA Length = 958 Score = 301 bits (770), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 200/487 (41%), Positives = 284/487 (58%), Gaps = 26/487 (5%) Query: 3 LDRLTNKFQLALADA--QSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 ++RL + AL +A +A HD+ +E HL++ L ++ V+ LL ++G +A +L Sbjct: 10 IERLNPYCRTALENAVGACVARRHDDVAVE--HLLARLCDEPSADVALLLRASGADAARL 67 Query: 61 RTDINQALNRLPQVEGTGGDVQPS-----QDLVRVLNLCDKLAQKRGDNFISSELFVLAA 115 R + AL+ P G PS QD + +L Q R +++ + A Sbjct: 68 RRQADAALDARPAGGGGRPAFAPSLLALLQDAWLIASLELGETQIRSAAVLAAAVARAAR 127 Query: 116 LESRGTLADILKAA--GATTANITQAIEQM---RG--------GESVNDQGAEDQRQALK 162 SRG D+L++ A A A Q RG G++ + GA D A+ Sbjct: 128 QPSRGG-DDMLQSLRRDALVARFAHACAQSIESRGPGARDAAPGDANDTPGAHDASSAIA 186 Query: 163 KYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQR 222 +Y D T +A G++DPV GRD +IR+ + +L RR KNNPV +GEPGVGKTA+VEGLA R Sbjct: 187 RYCEDFTAKARAGRIDPVFGRDAQIRQIVDILARRRKNNPVCVGEPGVGKTAVVEGLALR 246 Query: 223 IINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHT 282 I G+VP L+ +L LD+G L AGA +GEFE+RLK V+ ++ + V+LF+DE HT Sbjct: 247 IAEGDVPAALRHATLLGLDLGLLQAGASVKGEFEQRLKRVIAEIHASQAPVVLFVDEAHT 306 Query: 283 MVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPS 342 ++GAG GA DA N+LKPALARGEL + ATT EY++Y EKDAAL RRFQ V + P Sbjct: 307 LIGAGGPAGASDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALARRFQPVKLDSPD 366 Query: 343 VEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIR 402 V ++ ILRGLKERY+ H V I D A+VAAA LS RYI RQLPDKAIDL+D A + ++ Sbjct: 367 VATSVMILRGLKERYQDAHGVTIRDDALVAAAELSERYITGRQLPDKAIDLLDTACARVK 426 Query: 403 MQIDSKPEELDRLDRRIIQLKLEQQAL---MKESDEASKKRLDMLNEELSDKERQYSELE 459 ++ +KP L+ +R I L+ E++AL + E R+ ++ EL+ + L Sbjct: 427 VRQQTKPAALEDAERAIQALERERRALRRDLAERCAPDTPRVADIDRELAALSARADALS 486 Query: 460 EEWKAEK 466 E W A++ Sbjct: 487 EAWAAQR 493 >UniRef50_A9AYE5 ATPase AAA-2 domain protein n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AYE5_HERA2 Length = 776 Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 179/405 (44%), Positives = 248/405 (61%), Gaps = 11/405 (2%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +RL Q + AQ A ++ F+ P HL+ LL Q+ G +L G+ Q R Sbjct: 5 FERLNPNIQHIMLLAQEEARSLNHSFLGPEHLLLGLLRQKEGLAVQILHELGVFYPQTRQ 64 Query: 63 DINQALNRLPQVEGT--GGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLA-ALESR 119 I + + E T + + +L+ + A + I E +LA A E++ Sbjct: 65 IIQTMITPHARDEQTLLPAYLPLAPHTKTLLDTAAREADQLNQQQIGPEQLLLALAREAK 124 Query: 120 GTLADILK---AAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGK 176 G + IL G+ + A Q + E A+ L K I+LTE A G+ Sbjct: 125 GFVPYILARLGLHGSIVCDSLHAALQAKATEVAPAHAADTS--LLAKLGINLTEEARNGR 182 Query: 177 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRR 236 LDPVIGR EI RTIQ+L+RRTKNN VLIGEPGVGKTAIVEGLAQ++ +G +P + Sbjct: 183 LDPVIGRSAEIERTIQILRRRTKNNVVLIGEPGVGKTAIVEGLAQQLAHGAIPS-FQKTS 241 Query: 237 VLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAG 296 V +LD+G+L+AGA YRG+FEERLK V++ ++ + ILFIDELH +VGAG ++ +DA Sbjct: 242 VWSLDVGSLLAGAIYRGQFEERLKSVIDQISDHDA--ILFIDELHMIVGAGASENTVDAA 299 Query: 297 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 356 NMLKPALARG+L +GATT DEY Q+IEKD+AL+RRFQ + V EP +E+T+ IL+G++ + Sbjct: 300 NMLKPALARGKLRVIGATTFDEYSQHIEKDSALKRRFQPIVVQEPGIEETVTILQGIRPK 359 Query: 357 YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSI 401 YE HH + ++D A+ AA L+ +YI D LP KAIDL+DEAAS + Sbjct: 360 YEAHHELSLSDEALYTAARLAAQYIPDLYLPGKAIDLLDEAASRV 404 Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 137/340 (40%), Positives = 221/340 (65%), Gaps = 17/340 (5%) Query: 514 EAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQ 573 +AA+ E T V ++A+VLA TGIP++++ ++ +EQ L RVIGQ Sbjct: 416 DAASSAEAPT-----TVVCGRDVAQVLAIQTGIPLAQLFSDGLNRIEDIEQILSQRVIGQ 470 Query: 574 NEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRID 633 +A+ V+ AI+R+ AGL IG+ LFLGP+GVGKTEL K LA ++ S++A++R+D Sbjct: 471 AQAIRGVTKAIQRAFAGLKTKQDLIGALLFLGPSGVGKTELSKVLAEYLLGSNKALIRMD 530 Query: 634 MSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQV 693 MSE+ E HSVSRL+GAPPGY+GY++GG L+E+VRRRPYSV+LLD ++ AHPDV NI +Q+ Sbjct: 531 MSEYAEAHSVSRLIGAPPGYIGYDQGGQLSESVRRRPYSVVLLDNIDYAHPDVINIFIQI 590 Query: 694 LDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFG--------ELD----YAHMKELV 741 L++G +TD +GR VDFRN +++ T+N+G++L + + G E+D Y H+K+ Sbjct: 591 LEEGSITDARGRYVDFRNVLLLCTANVGTELFKRQTGLGFRAELPEIDQVARYEHLKQQA 650 Query: 742 LGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALK 801 L + + +F++R+++V++F PL +H+ +A + L+ + + + + ++ A Sbjct: 651 LDKIKTSLSLDFLHRLNDVILFQPLQAEHLEVLAGLFLQDVRQMVLAHEIRLDLTSNAHT 710 Query: 802 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPG 841 L+++GYD G R L+ IQ I +P++ +L G+ G Sbjct: 711 YLTDHGYDLERGVRRLRHLIQTHIVDPISNGLLHGKYRAG 750 >UniRef50_C7H753 ATP-dependent Clp protease, ATP-binding subunit ClpC n=2 Tax=Ruminococcaceae RepID=C7H753_9FIRM Length = 777 Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 155/314 (49%), Positives = 216/314 (68%), Gaps = 9/314 (2%) Query: 531 VTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590 +T +IA V+A+ +G+PV R+ E ERE+L ++E L+ ++GQ +AV AV+ AIRRSR G Sbjct: 434 LTREDIARVVAQASGVPVERVGEKERERLDKLESRLNAEIVGQQKAVAAVAGAIRRSRTG 493 Query: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAP 650 L +P RP+G+ LFLGPTGVGKT L KALA F S++A+++ DMSE+ E+H+ +RL+GAP Sbjct: 494 LGEPGRPMGAMLFLGPTGVGKTALAKALAASWFGSEKALLKFDMSEYQEQHTTARLLGAP 553 Query: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFR 710 PGY+G++EGG LTEAVRRRPYSV+L DE+EKAHPD+ NILLQ+L+DG+LTD GR DFR Sbjct: 554 PGYLGHDEGGQLTEAVRRRPYSVVLFDEIEKAHPDIQNILLQILEDGQLTDAMGRKADFR 613 Query: 711 NTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHN--------FRPEFINRIDEVVV 762 NT+V++TSNLG+ + + L +A E V S FRPE + R+DE++V Sbjct: 614 NTIVLLTSNLGARFLAGQSAPLGFAAGSEAVFEKQSAQAIEEAKKWFRPELVGRLDELIV 673 Query: 763 FHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQ 822 F PL E + +IA+ L +L R GY++ + +L+ P YGAR L+R + Sbjct: 674 FRPLAEDSLCAIAEKLLGQLEARAARNGYQLTHTPRVGAVLAARARSP-YGARELRRQVD 732 Query: 823 QQIENPLAQQILSG 836 + +E LA QI SG Sbjct: 733 RAVEQALANQIASG 746 Score = 281 bits (720), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 150/293 (51%), Positives = 200/293 (68%), Gaps = 3/293 (1%) Query: 159 QALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEG 218 +A KY DLT RA G+LDPV RD E+ R +++L RR KNNP L+GEPGVGKTA+ EG Sbjct: 179 RASDKYCRDLTRRAVDGELDPVFCRDAELDRMVEILCRRQKNNPCLVGEPGVGKTALAEG 238 Query: 219 LAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFID 278 LAQRI + VP L+GRR+LALDM +LVAG KYRG+FEER K +L +L + +G+ ILF+D Sbjct: 239 LAQRIASRNVPRMLQGRRLLALDMASLVAGTKYRGDFEERFKTLLEELVR-DGSAILFVD 297 Query: 279 ELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFV 338 E HT+VGAG A+GA+DA ++LKP LARGEL +GATT E+R +I+KDAALERRF +V + Sbjct: 298 EFHTIVGAGAAEGAIDAASILKPVLARGELQLIGATTDQEFRTHIQKDAALERRFGRVQI 357 Query: 339 AEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAA 398 EP+ AIL GL RYE +H V + + A LS RY+ R LPDKAIDL+DEA Sbjct: 358 EEPTPAQAAAILEGLAPRYERYHSVHLPPETLREAVELSVRYLPGRFLPDKAIDLVDEAC 417 Query: 399 SSIRMQIDSKPEELDRLDRRIIQLKLEQQA--LMKESDEASKKRLDMLNEELS 449 ++ R++ + + + L R I + Q + ++ E ++RLD L L+ Sbjct: 418 AAARIRAEREGKADPTLTREDIARVVAQASGVPVERVGEKERERLDKLESRLN 470 >UniRef50_B8BRH2 Member of the clp superfamily, regulatory gamma subunit (Fragment) n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8BRH2_THAPS Length = 782 Score = 300 bits (767), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 150/316 (47%), Positives = 218/316 (68%), Gaps = 12/316 (3%) Query: 531 VTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590 VTD +A V++ +GIPV ++ E+ KL+R+E ++ RV GQ+ AV++V+ AIRR+R+G Sbjct: 440 VTDDNVATVVSEISGIPVGKLDRDEKAKLMRLEADIAKRVKGQDPAVNSVARAIRRARSG 499 Query: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAP 650 L D +P+ +FLF GPTGVGKTELCKALA + ++ ++RIDMSE+ME+ SVSRLVGAP Sbjct: 500 LRDQTKPVATFLFCGPTGVGKTELCKALAQTYYGREKDIIRIDMSEYMERFSVSRLVGAP 559 Query: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFR 710 PGYVGY+EGG LTEA+RR+P+SV+L DE+EKAH DV N+LLQ+LD+G LTDG+GRTV F+ Sbjct: 560 PGYVGYDEGGQLTEAIRRKPHSVVLFDELEKAHEDVLNVLLQILDEGSLTDGKGRTVSFK 619 Query: 711 NTVVIMTSNLGS-DLIQERFGELDYAH--------MKELVLGVVSHNFRPEFINRIDEVV 761 N + +MTSN+GS ++++ GE A M+ V + +PEF+NRIDE+V Sbjct: 620 NCIFVMTSNIGSQEILKLSRGENPTAEAGSSAGMTMEGAVKNELEKKMKPEFLNRIDEIV 679 Query: 762 VFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALKLLSENGYDPV--YGARPLK 818 VF PL + + SIA L KR E+ + + + ++ G +GARP++ Sbjct: 680 VFKPLEDDVLISIAMNILDETMKRAASEQDMAVTCTQSLMATVANEGAFSAAQFGARPMR 739 Query: 819 RAIQQQIENPLAQQIL 834 RA ++ +E+ L++ I+ Sbjct: 740 RAAKRFLEDTLSEAIM 755 Score = 253 bits (646), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 137/259 (52%), Positives = 179/259 (69%), Gaps = 9/259 (3%) Query: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220 L K IDLTE A +G+LD V GR+ EIR ++ L RR K+NP LIGE GVGKTAI EG+A Sbjct: 177 LDKVGIDLTEMAREGRLDAVYGRENEIRMCLRTLGRRRKSNPCLIGEAGVGKTAIAEGVA 236 Query: 221 QRIING-----EVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVIL 275 Q + P L+G RV+++DM +LVAG K+RG+FEER++ ++ + + IL Sbjct: 237 QCLAESLPPLPPCPRALQGFRVVSVDMASLVAGMKFRGDFEERIQNLIKEASSTP--TIL 294 Query: 276 FIDELHTMVGAGKADGA--MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRF 333 FIDELHT++GAG G M A N++KPALARGE+ +GATT+ EYRQYIEKD ALERRF Sbjct: 295 FIDELHTLIGAGGGGGDGGMSAANLMKPALARGEIRVIGATTISEYRQYIEKDGALERRF 354 Query: 334 QKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDL 393 Q + V EP+V++ I IL + RYE H V+ T AI AA L+ RYI DR LPDKAIDL Sbjct: 355 QPILVNEPTVDEAIEILTAVTPRYEEFHGVRYTPFAIDAAVRLAERYINDRFLPDKAIDL 414 Query: 394 IDEAASSIRMQIDSKPEEL 412 +DEA S +++ D + ++L Sbjct: 415 LDEAGSMVKLADDGEEDDL 433 >UniRef50_A3A5U3 Putative uncharacterized protein n=2 Tax=Oryza sativa RepID=A3A5U3_ORYSJ Length = 691 Score = 298 bits (764), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 157/310 (50%), Positives = 218/310 (70%), Gaps = 12/310 (3%) Query: 540 LARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIG 599 +A+WTGIPV+ + E ER+KLL + Q LH RVIGQ+EAV AV+ A+ RSR+GL +PN+P G Sbjct: 319 IAQWTGIPVASLGEDERKKLLELPQLLHRRVIGQDEAVGAVAEAVVRSRSGLGNPNQPSG 378 Query: 600 SFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEG 659 SFLFLGPTGV KTEL KALA +F + + +VRIDMSE++ SV+RL+G+ PG GY++G Sbjct: 379 SFLFLGPTGVSKTELAKALAEQLFGNAKLLVRIDMSEYVNASSVTRLIGSAPGTNGYDKG 438 Query: 660 GYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSN 719 G LTE VR RPYSV+L DEVEKA VFN+ LQ+LDDGRLTDGQGRTVDF NT++IMTSN Sbjct: 439 GQLTELVRCRPYSVVLFDEVEKADAAVFNVFLQILDDGRLTDGQGRTVDFTNTIIIMTSN 498 Query: 720 LGSDLI----------QERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQ 769 LG+ + ++ E A K+ VL V +FRPE I+R+ E+VVF PL + Sbjct: 499 LGAQHLADAAAADASHKDDATEAAAAAAKQRVLADVQRHFRPELISRLTEMVVFRPLSGE 558 Query: 770 HIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPV--YGARPLKRAIQQQIEN 827 + +A++QL+ + RL E+G + +++ AL ++ D V YGARP+KR +++ + Sbjct: 559 QLRKVARLQLRGMAARLAEKGIGLDVANAALDVVLARSSDQVRAYGARPIKRCLEKDVMT 618 Query: 828 PLAQQILSGE 837 +++ ++ E Sbjct: 619 RISKMVVQEE 628 Score = 235 bits (600), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 125/256 (48%), Positives = 172/256 (67%), Gaps = 14/256 (5%) Query: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220 L + DLT AE DPV+GR+EEI R + +L R++KN+ VL+G GVGKTAI EGLA Sbjct: 55 LDAFGRDLT--AEAANADPVVGREEEIDRVVCILSRKSKNSAVLVGAAGVGKTAIAEGLA 112 Query: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVL----NDLAKQEGNVILF 276 QRI GEV L+G RV+ L++ A+++G YRG FEER+ GV+ + G V+LF Sbjct: 113 QRIARGEVSGVLEGARVVELNVAAMISGTSYRGTFEERMTGVIAEAEAEADAAAGKVVLF 172 Query: 277 IDELHTMVGAGK-ADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQK 335 +DE+H ++GAG+ + G +DA NMLKPALARG + C+GATT DEY +Y+ +DAA ERRFQK Sbjct: 173 VDEIHMLLGAGRVSGGCIDASNMLKPALARGRVRCLGATTHDEYHRYMVRDAAFERRFQK 232 Query: 336 VFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLID 395 V VAEPSV+DT+AILR LK Y+ HH A ++ S + +AIDL+D Sbjct: 233 VHVAEPSVDDTVAILRRLKPSYQDHH-------AWISRTPPSSPPPSSPVATSQAIDLVD 285 Query: 396 EAASSIRMQIDSKPEE 411 EA ++ R+ +D + ++ Sbjct: 286 EACATARLLMDRRKKK 301 >UniRef50_Q3JL54 ATP-dependent Clp protease, ATP-binding subunit ClpB n=51 Tax=Proteobacteria RepID=Q3JL54_BURP1 Length = 1042 Score = 298 bits (764), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 194/471 (41%), Positives = 267/471 (56%), Gaps = 40/471 (8%) Query: 24 HDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQALNRLPQVEGTGGDVQP 83 HD+ +E HL++ L ++ V+ LL + G +A +LR + AL+ P +G P Sbjct: 33 HDDVAVE--HLLARLCDEPSADVALLLRACGADAARLRRQADAALDARPAGDGGRPAFAP 90 Query: 84 S-----QDLVRVLNLCDKLAQKRGDNFISSELF------------------VLAALESRG 120 S QD + +L + GD I S VL +L Sbjct: 91 SLLALLQDAWLIASL------ELGDTHIRSAAVLAAAVARAARQPSPGGDDVLQSLRKDA 144 Query: 121 TLADILKAAGATT--ANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLD 178 +A A A + + + A++ G S D A+ +Y D T +A G +D Sbjct: 145 LVARFASGACARSIESRASGALDAAPGEAS----DTRDASSAIARYCEDFTAKARAGGID 200 Query: 179 PVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVL 238 PV GRD EIR+ + +L RR KNNPV +GEPGVGKTA+VEGLA RI G+VP L+G +L Sbjct: 201 PVFGRDAEIRQIVDILARRRKNNPVCVGEPGVGKTAVVEGLALRIAEGDVPATLRGATLL 260 Query: 239 ALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNM 298 LD+G L AGA +GEFE+RLK V+ ++ + V+LFIDE HT++GAG A GA DA N+ Sbjct: 261 GLDLGMLQAGASVKGEFEQRLKRVIAEIRASQTPVVLFIDEAHTLIGAGGAAGASDAANL 320 Query: 299 LKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYE 358 LKPALARGEL + ATT EY++Y EKDAAL RRFQ V + P V ++ ILRGLKERY+ Sbjct: 321 LKPALARGELRTIAATTWSEYKKYFEKDAALARRFQPVKLDSPDVATSVMILRGLKERYQ 380 Query: 359 LHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418 H V I D A+VAAA LS RYI RQLPDKAIDL+D A + ++++ +KP L+ R Sbjct: 381 DAHGVTIRDDALVAAAELSARYITGRQLPDKAIDLLDTACARVKVRQQTKPAALEDAQRA 440 Query: 419 IIQLKLEQQALMKESDE---ASKKRLDMLNEELSDKERQYSELEEEWKAEK 466 I L+ E++AL E E R+ ++ EL+ + L + W A++ Sbjct: 441 IQALERERRALRDELAERCAPDTPRVADIDRELAALSARAGALRDAWAAQR 491 Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 137/330 (41%), Positives = 205/330 (62%), Gaps = 7/330 (2%) Query: 526 LLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIR 585 L+R V IA+V+A WTGI ++ +LR+ L R+ GQ+ A++ +S A++ Sbjct: 618 LVRIDVDPDAIADVVADWTGIAAGKLRRDRANVMLRLADTLRRRIRGQDHAIEQISEAVK 677 Query: 586 RSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSR 645 AG+ DP RP+G FL GP+G GKTE A+A+ +F + ++V ++MSEF E+H VSR Sbjct: 678 AGAAGVHDPRRPLGVFLLAGPSGTGKTETALAVADALFGDERSIVVVNMSEFQERHDVSR 737 Query: 646 LVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGR 705 L+G+PPGYVGY EGG LTEAVR+RPYSV+LLDEVEKAHPDV N+ QV D G L+DG+G+ Sbjct: 738 LIGSPPGYVGYGEGGMLTEAVRQRPYSVVLLDEVEKAHPDVLNLFYQVFDKGSLSDGEGK 797 Query: 706 TVDFRNTVVIMTSNLGSDLIQE---RFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 762 VDF NTV+ +TSNLG+D+I + R D M+ V +S +F+P + R+ E + Sbjct: 798 EVDFANTVIFLTSNLGADIIADIAARGARPDPDAMRAAVRPALSRHFKPALLARMTE-IP 856 Query: 763 FHPLGEQHIASIAQIQLKRLYKRL-EERGYEIHISDEALKLLSENGYDPVYGARPLKRAI 821 + PL +A IA+++L+R+ R+ + I D + ++ + GAR + + Sbjct: 857 YAPLAPDTLADIARLKLERIATRVAAQHATRIVYDDAVVAHVAARCTEVESGARNVDFIL 916 Query: 822 QQQIENPLAQQIL--SGELVPGKVIRLEVN 849 Q+ + LAQ +L +G P IR+ ++ Sbjct: 917 QRHVLPALAQHVLVCAGNAAPMPAIRVAID 946 >UniRef50_A3K6L5 ATP-dependent Clp protease, ATP-binding subunit ClpB (Fragment) n=1 Tax=Sagittula stellata E-37 RepID=A3K6L5_9RHOB Length = 637 Score = 298 bits (763), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 209/628 (33%), Positives = 320/628 (50%), Gaps = 84/628 (13%) Query: 271 GNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALE 330 N +L ID+ + A + +G N + + G C+ ++ ++ + + Sbjct: 22 ANSVLLIDDFRDFIEAARNNGTTHLINAVMRDVLTGRYQCILEARDEDLEIVLKCHSNMR 81 Query: 331 RRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRY-IAD----RQ 385 F + + EP + I R HH V +T+ AI AA L+ +Y + D R Sbjct: 82 EVFTLLEIREPDPDALKEIALVGAGRLTAHHGVPVTEQAIAAAIDLTSKYHVGDLSLSRA 141 Query: 386 LPDKAIDLIDEAASSIRMQIDSKPEELDRL---------------DRRIIQLKLEQQALM 430 P++ ++LID A +S R + +P L RL I++ + E Q ++ Sbjct: 142 QPERTLNLIDRALTSYRQTVHRRPPHLARLRATLAEIEALPDAARSADIVRQRDELQGML 201 Query: 431 K--ESDEASKK-RLDML-NEELS----------------DKERQYSELEEEWKAEKASLS 470 E+D A+K RL L N + S KER + E A LS Sbjct: 202 ATAETDWAAKTDRLTALRNAQRSGEELLLALEEQLSGERQKERAEAAPTEAAPTFSARLS 261 Query: 471 G--------TQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGK 522 G I E+ QA AI +R D L++++ A L Sbjct: 262 GGAGFGSREENRILQEIRQATTAIADNKRAFD-------------TLQEEMNAGLALGAA 308 Query: 523 TMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSN 582 + L E + + +GIP ++ + EREKLL ++Q L RV GQ+ AV+ + Sbjct: 309 AVTL--------EFSAI----SGIPAEKLNQDEREKLLTLDQTLKARVYGQDHAVEKLVG 356 Query: 583 AIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHS 642 A+ + AGL +P++P GSF+F GP+GVGKTE+ K LA + D+++AM+R DMSE+MEKH+ Sbjct: 357 AVLMANAGLKEPDKPQGSFMFCGPSGVGKTEIAKTLAMALKDNEKAMLRFDMSEYMEKHA 416 Query: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702 +++L+GAPPGY GYE GG LT AVRR P+S+IL DE+EKAHPDVFN+ LQVLDDGRLTD Sbjct: 417 LAKLIGAPPGYEGYEAGGILTNAVRRNPHSIILFDEIEKAHPDVFNVFLQVLDDGRLTDN 476 Query: 703 QGRTVDFRNTVVIMTSNLGSDLIQERF--GELDYAHMKELVLGVVSHNFRPEFINRID-- 758 +G TV F NT+++MT+N+G Q F +L +A E + + FRPEF+NR + Sbjct: 477 RGLTVSFANTLILMTTNIG----QAHFLNADLQFAAAMEETMRDLEGTFRPEFLNRFNGR 532 Query: 759 -EVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHI--SDEALKLLSENGYDPVYGAR 815 ++ F L + I IA +L+++ R+ G+ + I + E + L + YDPV+GAR Sbjct: 533 QNIIGFRTLPLELIEKIANRELRKVNARIRAAGHAVTIAMAPEQVSALCADRYDPVHGAR 592 Query: 816 PLKRAIQQQIENPLAQQILSGELVPGKV 843 + ++ +A+ ILS G + Sbjct: 593 GIPGFFAAEVYPSIARTILSAPETAGTL 620 >UniRef50_B0H033 Chaperone ClpB 1 (Fragment) n=3 Tax=Gammaproteobacteria RepID=B0H033_YERPE Length = 359 Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 168/382 (43%), Positives = 227/382 (59%), Gaps = 28/382 (7%) Query: 191 IQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAK 250 I +L RR KNNP+L+GEPGVGKTA+VEGLA RI +G VP+ LK V LD+G L AGA Sbjct: 3 IDILSRRRKNNPILVGEPGVGKTALVEGLALRIADGNVPDSLKTVSVRTLDLGLLQAGAG 62 Query: 251 YRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHC 310 +GEFE+RLK V+ + + V+LFIDE HT++GAG G DA N+LKPALARGEL Sbjct: 63 VKGEFEQRLKNVIEAVQQSPSPVLLFIDEAHTIIGAGNQAGGADAANLLKPALARGELRT 122 Query: 311 VGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAI 370 + ATT EY+QY E+DAALERRFQ V V EP + +LRGLKERY HH V I D AI Sbjct: 123 IAATTWSEYKQYFERDAALERRFQMVKVDEPDDDTACLMLRGLKERYATHHGVHILDAAI 182 Query: 371 VAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALM 430 AA TLS R++ RQLPDKA+DL+D A + +RM ID+ P L ++ + L +EQQA+ Sbjct: 183 TAAVTLSRRFLTGRQLPDKAVDLLDTAGARVRMSIDTLPTALMAINAELAALAMEQQAIE 242 Query: 431 KE---SDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIE 487 ++ S RL + + + LE+++K EK + IE Sbjct: 243 QDLLLLPNVSSTRLPEIEQRRAALAVGQHTLEQQYKEEK-------------RLTTLIIE 289 Query: 488 QARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIP 547 + + ++A + LQ E Q++G LL V +A V+A WTG+P Sbjct: 290 ARQDIANVAHLVALQ-----------EELVQIQGNA-PLLSLDVDVRTVAAVIADWTGVP 337 Query: 548 VSRMMESEREKLLRMEQELHHR 569 +S +++ E+ LL++E L R Sbjct: 338 LSSLLKDEQTDLLQLENHLATR 359 >UniRef50_Q7XL03 OJ000315_02.14 protein n=2 Tax=Oryza sativa Japonica Group RepID=Q7XL03_ORYSJ Length = 877 Score = 295 bits (754), Expect = 7e-78, Method: Compositional matrix adjust. Identities = 184/458 (40%), Positives = 259/458 (56%), Gaps = 59/458 (12%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPL-LTSAGINAGQLR 61 +R T + A+ +Q A G ++ + P HL+ L+ ++ SPL ++G+ + R Sbjct: 71 FERFTERAVKAVVFSQREARGMGDETVAPHHLLLGLVAEDR---SPLGFLASGVRVERAR 127 Query: 62 TDINQALNR--LPQVE-GTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALE- 117 A+ + L Q G DV S RV + ++ G NFIS E L Sbjct: 128 EACRAAVGKEGLAQAPVGLATDVPFSGASKRVFEAAVEFSRNMGCNFISPEHIALGLFNL 187 Query: 118 SRGTLADILKAAGATTANIT-QAIEQMRG-------------------------GES--V 149 + T ++LK+ G ++ + QA+ +++G G+S V Sbjct: 188 NDPTTNNVLKSLGVDSSQLAKQALTRVQGELAKDGREPVGLSSFKVREKFTPGGGKSAIV 247 Query: 150 NDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPG 209 ++ AL + +DLT RA G +DPVIGR +EI R +Q++ RRTKNNP+L+GE G Sbjct: 248 KYSNKNKEKSALALFCLDLTMRASGGLIDPVIGRKDEIERVVQIICRRTKNNPILLGEAG 307 Query: 210 VGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQ 269 VGKTAI EGLA +I NG+VP L G+R+L+LD+ L+AGAK RGE E R+ ++ ++ K Sbjct: 308 VGKTAIAEGLAHKIANGDVPIFLVGKRILSLDVALLMAGAKERGELEARVTSLIREVRKA 367 Query: 270 E------------------GNVILFIDELHTMVGAGKAD-----GAMDAGNMLKPALARG 306 + G+VILFIDE+HT++G+G A +D N+LKPALARG Sbjct: 368 DPKLPFLVFNLQRAPKFHAGDVILFIDEVHTLIGSGIAGRGSKGAGLDIANLLKPALARG 427 Query: 307 ELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQIT 366 EL C+ +TTLDE+R + +KD AL RRFQ V V EPS ED + IL GL+E+YE +H + T Sbjct: 428 ELQCIASTTLDEHRLHFDKDKALARRFQPVLVNEPSQEDAVKILLGLREKYETYHKCKYT 487 Query: 367 DPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQ 404 +I AA LS RYIADR LPDKAIDLIDEA S RM+ Sbjct: 488 LESINAAVYLSARYIADRHLPDKAIDLIDEAGSRARME 525 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 120/256 (46%), Positives = 166/256 (64%), Gaps = 30/256 (11%) Query: 624 DSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAH 683 D A VR+DMSE+ME+H+VS+L+G+PPGY+G+ EGG LTEAVRR+P++V+LLDE+EKAH Sbjct: 598 DKKSATVRLDMSEYMERHAVSKLIGSPPGYMGFGEGGTLTEAVRRKPFTVVLLDEIEKAH 657 Query: 684 PDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLI-----------QERFGEL 732 PD+FNILLQ+ +DG LTD QGR V F+NT+++MTSN+GS I Q E Sbjct: 658 PDIFNILLQIFEDGHLTDSQGRRVSFKNTLIVMTSNVGSTSISNGKRSIGFQTQTDTEEK 717 Query: 733 DYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIA-------------------S 773 YA MK LV+ + FRPE +NRIDEVVVFHPL + + Sbjct: 718 SYAAMKSLVMEELKAFFRPELLNRIDEVVVFHPLEKTQACCFYRYCTCILPCTFVNTMLA 777 Query: 774 IAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQI 833 I I L+ + R+ G + +SD L+S++GYD YGARPL+RA+ Q +E+ +++ I Sbjct: 778 ILNIMLQEVKGRILALGIGLEVSDSMKDLISQHGYDKSYGARPLRRAVTQLVEDVISEAI 837 Query: 834 LSGELVPGKVIRLEVN 849 LSG+ PG I ++ + Sbjct: 838 LSGQFKPGDTIMVDTD 853 >UniRef50_P05444 ClpA homolog protein n=766 Tax=cellular organisms RepID=CLPA_RHOBL Length = 793 Score = 293 bits (749), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 147/263 (55%), Positives = 191/263 (72%), Gaps = 2/263 (0%) Query: 147 ESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIG 206 E+ + E + AL KY +DL +A +G +DP+IGR+ E+ R IQVL RR KNNP+L+G Sbjct: 185 ETPKAEAGEAKESALSKYCVDLNIKARKGDVDPLIGREAEVERAIQVLCRRRKNNPLLVG 244 Query: 207 EPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDL 266 +PGVGKTAI EGLA +II EVPE L G + +LDMGAL+AG +YRG+FEERLK V+ +L Sbjct: 245 DPGVGKTAIAEGLAWKIIKKEVPEVLSGATIFSLDMGALLAGTRYRGDFEERLKAVVKEL 304 Query: 267 AKQEGNVILFIDELHTMVGAG-KADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEK 325 + + ILFIDE+HT++GAG + GAMDA N+LKPAL G+L C+G+TT E+RQ+ EK Sbjct: 305 -EDHPDAILFIDEIHTVIGAGATSGGAMDASNLLKPALQGGKLRCMGSTTYKEFRQHFEK 363 Query: 326 DAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQ 385 D AL RRFQK+ V EPSV D I IL GLK +E HH ++ T AI +A L+ RYI DR+ Sbjct: 364 DRALSRRFQKIDVNEPSVPDAIKILMGLKPHFEEHHELRYTADAIKSAVELASRYINDRK 423 Query: 386 LPDKAIDLIDEAASSIRMQIDSK 408 LPD AID+IDEA ++ + DSK Sbjct: 424 LPDSAIDVIDEAGAAQHLVSDSK 446 Score = 293 bits (749), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 151/321 (47%), Positives = 216/321 (67%), Gaps = 5/321 (1%) Query: 535 EIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADP 594 EI V+A+ IP + + + E L +E+ L V GQ++A++A+S +I+ +RAGL +P Sbjct: 455 EIEAVVAKIARIPPRNVSKDDAETLRDLERTLKRLVFGQDKAIEALSASIKLARAGLREP 514 Query: 595 NRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYV 654 +PIG++LF GPTGVGKTE+ K LA + ++R DMSE+MEKH+VSRL+GAPPGYV Sbjct: 515 EKPIGNYLFTGPTGVGKTEVAKQLAATL---GVELLRFDMSEYMEKHAVSRLIGAPPGYV 571 Query: 655 GYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVV 714 G+++GG LT+ V + P+ V+LLDE+EKAHPDV+NILLQV+D G+LTD GR VDFRN ++ Sbjct: 572 GFDQGGMLTDGVDQHPHCVLLLDEIEKAHPDVYNILLQVMDHGKLTDHNGRAVDFRNVIL 631 Query: 715 IMTSNLG-SDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIAS 773 IMTSN+G +D+ +E G E V F PEF NR+D V+ F PLG + I Sbjct: 632 IMTSNVGAADMAKEAIGFGRERRTGEDT-AAVERTFTPEFRNRLDAVISFAPLGREIILQ 690 Query: 774 IAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQI 833 + + + +L +L +R I ++ EA L E GYD GARPL R IQ+ I+ PLA+++ Sbjct: 691 VVEKFVLQLEAQLIDRNVHIELTPEAAAWLGEKGYDDKMGARPLGRVIQEHIKKPLAEEL 750 Query: 834 LSGELVPGKVIRLEVNEDRIV 854 L G+L G ++++ V +D IV Sbjct: 751 LFGKLTKGGLVKVGVKDDAIV 771 >UniRef50_A8EW19 ATP-dependent Clp protease, ATP-binding subunit n=5 Tax=Campylobacterales RepID=A8EW19_ARCB4 Length = 737 Score = 292 bits (748), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 162/396 (40%), Positives = 241/396 (60%), Gaps = 8/396 (2%) Query: 14 LADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQALNRLPQ 73 A A S A ++++ H+ L+N + ++ L G++ L ++ ++ Sbjct: 10 FAQAVSYAKSSKHEYLTVEHVFLMLINDQ--TIENLFIDLGVDTNILFNELKSYIDENTP 67 Query: 74 VEGTGGDVQP--SQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLAD-ILKAAG 130 + + +P + L ++ Q G + E +A L+ + + +LK G Sbjct: 68 LLPNDANDEPIETVSLSSTIDYMVSHTQSSGKTNANVEDMFVAILKDEKSYSTYLLKKYG 127 Query: 131 ATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRT 190 +I + I E ND+ +E+++ L K + +L A++G++DPVIGRD EI R Sbjct: 128 IQRVDILEEISHKDEDEQKNDENSENEK-VLDKNSSELVSIAKKGEIDPVIGRDREISRV 186 Query: 191 IQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAK 250 I++L RR KNNP+L+GEPGVGKTAI EGLA +I +VPE L +V +LDMG+++AG K Sbjct: 187 IEILSRRKKNNPILVGEPGVGKTAIAEGLALQIAQKKVPEFLLDSKVFSLDMGSMIAGTK 246 Query: 251 YRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADG-AMDAGNMLKPALARGELH 309 YRG+FE++LK +L +++K + N ILFIDE+HT+VGAG G AMDA N+LKP LA G+L Sbjct: 247 YRGDFEKKLKSLLKEVSKIK-NAILFIDEIHTIVGAGSVGGSAMDASNILKPMLANGKLR 305 Query: 310 CVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPA 369 C+GATT E+R KD AL RRF KV V EPS+ED+I IL GLK +YE +H V+ + A Sbjct: 306 CIGATTFSEFRNDFSKDKALSRRFAKVDVEEPSIEDSILILEGLKSKYEEYHGVKYSKSA 365 Query: 370 IVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQI 405 I +A LS +YI DR LPD AID+IDE ++ ++ + Sbjct: 366 IQSAVELSKKYITDRFLPDCAIDVIDEVGAAKKISL 401 Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 143/344 (41%), Positives = 218/344 (63%), Gaps = 10/344 (2%) Query: 511 KQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRV 570 K++ AT L+ K + +T ++ E++++ IP +++ L +E+ + RV Sbjct: 397 KKISLATTLKTKAESNIT--ITSKDVEEIISKMAHIPPKSATKTDLSLLKNLEKNMQKRV 454 Query: 571 IGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMV 630 GQ+ A+ + AI+R++AGL +PIGSFLF GPTGVGKTE+ + L+ M E Sbjct: 455 FGQDTAISTIVQAIKRNKAGLGLDKKPIGSFLFTGPTGVGKTEVARELSLQMGIHFE--- 511 Query: 631 RIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNIL 690 R DMSE+ME H+VSRL+GAP GYVG+E+GG LTEA+R+ P++V+LLDE+EKAHPD+ +IL Sbjct: 512 RFDMSEYMEAHTVSRLIGAPAGYVGFEQGGLLTEAIRKHPHTVLLLDEIEKAHPDLMSIL 571 Query: 691 LQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLG-VVSHNF 749 LQV+D+ +LTD G DF+N V+IMTSNLG+ + +A ++L ++ F Sbjct: 572 LQVMDNAQLTDNSGNKADFQNVVLIMTSNLGA----TEANVMGFAKNEKLNENKAINKFF 627 Query: 750 RPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYD 809 PEF NR+D VV F L ++ + ++ L K+L ++ +I IS +A K L+ GYD Sbjct: 628 APEFRNRLDAVVTFESLNIDVVSKVVGKFIEDLEKQLVDKKIKIEISVKAKKELAILGYD 687 Query: 810 PVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRI 853 GARPL + I +I+NPL +IL G+L G +++++ N + I Sbjct: 688 KAMGARPLNKVISDKIKNPLTDEILFGKLKKGGIVKIDYNNEFI 731 >UniRef50_B8J0Q4 ATP-dependent Clp protease, ATP-binding subunit clpA n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J0Q4_DESDA Length = 832 Score = 289 bits (739), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 150/330 (45%), Positives = 212/330 (64%), Gaps = 12/330 (3%) Query: 531 VTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590 V+ ++ ++AR GIPV + +ER +L +E++L V GQ+ A++ AI R+RAG Sbjct: 434 VSVGDVERIVARMAGIPVRTVSGTERNRLASLEKDLKELVFGQDAAIELTVRAILRARAG 493 Query: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAP 650 L RP G+FLF GPTGVGKTE+ ++LA M +R DMSE+MEKH+VSRL+GAP Sbjct: 494 LGQEQRPAGAFLFYGPTGVGKTEVARSLAKLM---GVEFLRYDMSEYMEKHAVSRLIGAP 550 Query: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFR 710 PGYVG+++GG LTEAVR+ PYSV+LLDEVEKAHPD+FN+LLQV+D LTD GR DF Sbjct: 551 PGYVGFDQGGLLTEAVRKAPYSVVLLDEVEKAHPDIFNVLLQVMDYATLTDNTGRKTDFS 610 Query: 711 NTVVIMTSNLGS-DLIQERFG-----ELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFH 764 + V+IMTSN G+ D+ + G D AH L V + F PEF NR+D +V F Sbjct: 611 HVVLIMTSNAGAFDMSRPAMGFGGATRQDAAHKG---LKAVENTFSPEFRNRLDALVPFG 667 Query: 765 PLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQ 824 L E + I + + + LE+R + + +A + L+ G+DP GARPL+R ++ + Sbjct: 668 SLTEDMMLRIVDKFMAEIIESLEQRQVSLELGQKARQWLARKGFDPTMGARPLRRLLRTE 727 Query: 825 IENPLAQQILSGELVPGKVIRLEVNEDRIV 854 +E+ LA ++L G L G RL++ +D +V Sbjct: 728 LEDRLAHELLFGSLAKGGTARLDLVDDALV 757 Score = 277 bits (709), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 159/392 (40%), Positives = 240/392 (61%), Gaps = 17/392 (4%) Query: 24 HDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQALNRLPQVEGTGG--DV 81 HD +E H++ AL N G + LL +G + LR + NR +V G +V Sbjct: 22 HDMLTVE--HVLYALTNSMRGRI--LLEGSGASVAVLREQLEDFFNRELEVVPLAGKHEV 77 Query: 82 QPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADI-LKAAGATTANITQAI 140 ++ + RVL + G + + +++ ++ + A L+ G ++ + Sbjct: 78 AQTEGVQRVLERALGHIRAAGRDTVELGDLLISIMDEEESYAHYYLRKQGVERLDVLTFV 137 Query: 141 EQMR---GGESVNDQGAEDQRQ-----ALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQ 192 GG DQG E + + L +Y +DLT RA +GK+DP++GR+ E+ R ++ Sbjct: 138 SHGMDEGGGSRGVDQGGEGEEKDAKADPLAQYAVDLTARAREGKIDPLVGRENELDRAVE 197 Query: 193 VLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYR 252 VL RR KNNP+ +G+PGVGKTA+ EGLA RI+ +VPE ++ ALDMG L+AG +YR Sbjct: 198 VLCRRRKNNPLFVGDPGVGKTALAEGLALRIVEDDVPEMFSNAKLFALDMGLLLAGTRYR 257 Query: 253 GEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGK-ADGAMDAGNMLKPALARGELHCV 311 G+FE RLK V+ L K+ ILFIDE+HT+VGAG + G+MDA N+LKP LA GEL C+ Sbjct: 258 GDFESRLKAVVQRL-KELPEAILFIDEIHTIVGAGSTSGGSMDASNLLKPVLASGELRCI 316 Query: 312 GATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIV 371 G+TT +E+R + EKD AL RRFQ++ + EPS E+ +AIL+GL++RY H V+ + A+ Sbjct: 317 GSTTYEEFRNHFEKDRALARRFQRIDLTEPSPEECLAILQGLEKRYADFHKVRYSTAAVK 376 Query: 372 AAATLSHRYIADRQLPDKAIDLIDEAASSIRM 403 A L+ R++ DR LPDKAID++DE+ +++R+ Sbjct: 377 AMVDLTARHVRDRLLPDKAIDVMDESGAAVRL 408 >UniRef50_A7HAC7 ATPase AAA-2 domain protein n=6 Tax=Cystobacterineae RepID=A7HAC7_ANADF Length = 840 Score = 289 bits (739), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 154/320 (48%), Positives = 218/320 (68%), Gaps = 10/320 (3%) Query: 539 VLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPI 598 +A+ GIP SR++ S+RE++L +E L RV+G +A+ V+ ++R+ AG A RP+ Sbjct: 509 TVAKMAGIPESRLLASDRERILGLEVALRDRVVGHADAIARVAAVLKRNFAGFAT-RRPM 567 Query: 599 GSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEE 658 GSFLFLGPTGVGKTEL +ALA+ ++ + +A+V++DMSE E V+RLVGA PGYVGY E Sbjct: 568 GSFLFLGPTGVGKTELARALADALYGAPDALVQLDMSECAETTGVARLVGAAPGYVGYGE 627 Query: 659 GGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTS 718 GG LT+AVRRRP SV++LDE+EKAH DV +LLQVL++GRLTDG+GR VDF N VV++TS Sbjct: 628 GGQLTDAVRRRPASVVVLDEIEKAHRDVQMLLLQVLEEGRLTDGRGRQVDFSNAVVVLTS 687 Query: 719 NLGS-DLIQERFGELDYAHMKEL------VLGVVSHNFRPEFINRIDEVVVFHPLGEQHI 771 NLG+ + + G + + + + VL PE NR+DE V F PL + + Sbjct: 688 NLGAEEATRTSTGAMGFGAAERVQPRTDRVLQAARGAVPPELWNRLDERVCFSPLSREDV 747 Query: 772 ASIAQIQLKRLYKRLE-ERGYEIHISDEALKLLSEN-GYDPVYGARPLKRAIQQQIENPL 829 A +A++ + +RLE ER +D A+ L EN G+D GARP++ AIQ+ +E PL Sbjct: 748 AKVARLLVAGSSRRLEAERRIRFEATDGAIAHLVENGGFDAALGARPMRGAIQRLVEAPL 807 Query: 830 AQQILSGELVPGKVIRLEVN 849 A++IL+GEL PG V ++V+ Sbjct: 808 AERILAGELGPGDVAIVDVD 827 Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 169/410 (41%), Positives = 233/410 (56%), Gaps = 49/410 (11%) Query: 29 IEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQALN--------RLPQVEGTGGD 80 ++ LHL+ A+ + LL + G+ QL T N AL+ RL +++ Sbjct: 92 VDCLHLLIAMGRVRASAAHQLLGACGL---QLSTLRNVALSYFTASMPRRLRELQPV--Q 146 Query: 81 VQPSQDLV---------------RVLNLCDKLAQKRGD------NFISSELFVLAALESR 119 V+P+Q L R L L L Q GD + E V AA ++R Sbjct: 147 VRPAQPLTPPRRSEPRARAADPSRDLQLDAHLEQALGDATATDGEAVHPERGVSAAADTR 206 Query: 120 G-------TLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQ--ALKKYTIDLTE 170 T D +AA + A + RG + A D ++ L + +LTE Sbjct: 207 SRGTTPPPTSTDAPEAAHPERSVSADAETRSRGTRARRSPHALDPKELPWLSQLGRNLTE 266 Query: 171 RAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPE 230 A G+LDP++GR++E+ I VL +R NNP+L+GEPGVGKTAIVEG+AQR++ + Sbjct: 267 LAAAGRLDPLVGREQEVEEAIDVLGKRRTNNPLLVGEPGVGKTAIVEGIAQRLL-----Q 321 Query: 231 GLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKA- 289 + R ++ +DM ++VAG RG F E+L G+ ++ + G V++FIDE+HT++GAG+A Sbjct: 322 SARERVIVEIDMASVVAGTSLRGAFSEKLLGIQEEVRRAAGRVVVFIDEIHTLMGAGQAG 381 Query: 290 DGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAI 349 +G DA N LK AL RGE C+GATT DEYRQ+IEKD ALERRF V V EPSV DT+ I Sbjct: 382 EGPQDAANELKAALGRGEFPCIGATTHDEYRQHIEKDPALERRFTPVLVREPSVADTVTI 441 Query: 350 LRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAAS 399 LRGL RYE HH V+ D A+ AAA+LS RY+ DR LPDKA+ +D A S Sbjct: 442 LRGLAPRYEKHHRVRFADGALEAAASLSARYVTDRFLPDKAVSALDLAGS 491 >UniRef50_A8I996 ClpB chaperone, Hsp100 family (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8I996_CHLRE Length = 787 Score = 288 bits (738), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 147/258 (56%), Positives = 189/258 (73%) Query: 144 RGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPV 203 RG + G AL+++ DLTE A +G LDPVIGR + I RT+Q+L RRTKNNPV Sbjct: 75 RGSTATGAAGRRVPGAALQRFGRDLTEEARRGLLDPVIGRQDVIARTLQILLRRTKNNPV 134 Query: 204 LIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVL 263 L+GEPGVGKTA+VEG+AQ I + P GL G+RV+ALD+ A++AG+ YRGEFEERL+ V+ Sbjct: 135 LVGEPGVGKTALVEGIAQLIASAAAPPGLAGKRVVALDVTAVLAGSSYRGEFEERLQAVV 194 Query: 264 NDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYI 323 D+A GNVILF+DE+H +VGAG A+G +DA N+LKPALARG L C+GATTLDEYR+++ Sbjct: 195 ADVAAARGNVILFVDEMHMLVGAGGAEGGLDAANILKPALARGTLRCIGATTLDEYRKHV 254 Query: 324 EKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIAD 383 E D A RRFQ V V EP + + L+GL RYE HH V T A+ AAA + RY+ + Sbjct: 255 ESDPAFARRFQSVLVEEPGEAEVVGWLQGLAPRYEQHHGVLFTRAALRAAAGCAKRYVTE 314 Query: 384 RQLPDKAIDLIDEAASSI 401 R+LPD AIDL+DEAA+ + Sbjct: 315 RRLPDSAIDLMDEAAAHV 332 Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 102/294 (34%), Positives = 149/294 (50%), Gaps = 32/294 (10%) Query: 531 VTDAEIAEVLARWTGIPVSRMMESER-EKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA 589 V + + EV AR G+P++ ++ +R + + L V+GQ EAV AV A++ R Sbjct: 471 VDELAVLEVAARAAGLPLAAVLRDQRGAPVSHLRAALEAAVVGQREAVRAVCTAVQLHRL 530 Query: 590 GL------------------------ADPNRPIGSFLFLGPTGVGKTELCKALANFMFDS 625 GL RP+ SFL GP GVGK+ LCKALA +F Sbjct: 531 GLAATAAAAAGAGAAAAGGEGWQKWRGQQQRPVASFLLEGPPGVGKSTLCKALATELFHD 590 Query: 626 DEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPD 685 A++ + E + +VSRLVGA PGYVG+ GG LTEA+RRRP V+L+ V++AH + Sbjct: 591 PAALLVLHGGELASRTAVSRLVGAAPGYVGFGTGGLLTEALRRRPAGVLLVQGVDRAHFE 650 Query: 686 VFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVV 745 V +LL+ + DG + DGQGR RNT+V++T++ + G + + VLG Sbjct: 651 VQELLLRGVQDGVIRDGQGRATSLRNTIVVLTASATAG------GNTNDSGSSLGVLGGQ 704 Query: 746 SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYE-IHISDE 798 PE +D VV F PL + + Q+ + +L G IH+S E Sbjct: 705 HGQLLPELWAGVDRVVRFAPLTAAERVEVVRRQVSDMATQLAPAGVAGIHLSPE 758 >UniRef50_D2VM27 Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VM27_NAEGR Length = 828 Score = 286 bits (731), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 189/593 (31%), Positives = 320/593 (53%), Gaps = 25/593 (4%) Query: 274 ILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRF 333 ILFI + + MV ++L+P L + L V T EY ++ + L F Sbjct: 206 ILFIHQFYNMVDDYSYSFYDSVSSVLQPLLEKKRLKLVTCMTPSEYAKFTKN--PLASHF 263 Query: 334 QKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDL 393 + + V EP+ T+ I+ KE E H V I + + A LS+RYI + P K I + Sbjct: 264 EVIKVGEPNFATTLDIVTKKKEYLEASHGVFIDNDIVEEALLLSNRYIPLKANPMKCISV 323 Query: 394 IDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASK--KRLDMLNEELSDK 451 +DE AS + + S P + L+ +I ++ ++ + + S K+L+ L E + K Sbjct: 324 LDELASIVEKRGCSIPINVLELEDKIKKVSIDIDKKSDDDIDTSSLMKKLEKLKESYATK 383 Query: 452 ERQYSELEEEWKAEKASLSGTQT-------IKAELEQAKIAIEQARRVGDLARMSELQYG 504 YS WKAE +L + +K EL IA + R S++ Sbjct: 384 ---YSA----WKAEYQALQSYRENRVRLIGLKKELGDC-IASITSPDCESAKRASKIIED 435 Query: 505 KIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK--LLRM 562 IPE++ L+ + K + + N+ T +++ V++R +GIP + + ++ L M Sbjct: 436 DIPEVKASLKIFEKQSAKN-KYVNNRATLDDLSVVISRMSGIPQKDLYFTTQKNHSLNNM 494 Query: 563 EQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFM 622 E L +VIGQ +A+ ++S IR ++ GL D N+P S LF G +GVGKTEL K +A + Sbjct: 495 ESILEEQVIGQKQAISSISKTIRVAKLGLRDANKPQASLLFCGFSGVGKTELAKQIAKVV 554 Query: 623 FDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKA 682 + ++ ++ IDM+++ + SVS L+G GYVGY++GG LT +++ P+ VI+ DE+EKA Sbjct: 555 YGNENSVSVIDMTKYNTEFSVSGLIGTSAGYVGYDDGGELTNTIKKNPFQVIIFDEIEKA 614 Query: 683 HPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSD-LIQERFGELDYAHMKELV 741 H V+NILL V ++G + G +V ++T++I+TSN+G+ L Q + + D +E+ Sbjct: 615 HSRVWNILLPVFEEGVCQNNYGESVSLKDTIIILTSNVGTKRLFQHKEEDKDLTQ-QEIF 673 Query: 742 LGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRL-EERGYEIHISDEAL 800 + F PEF+NR+D++V+F+ L + I IQL++L +RL ++R +I +S EA Sbjct: 674 HEEIKETFAPEFLNRLDDIVIFNELSMHDLDKILSIQLRKLEERLSKKREIKIELSTEAR 733 Query: 801 KLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRI 853 + L N +D GARP+KR IQ + P++ G+L ++++V+E ++ Sbjct: 734 QFLIFNSFDIQLGARPIKRNIQNYLSAPISDLFYQGKLDKHCTLKVDVDEKKL 786 >UniRef50_C6V4H7 ATP-dependent Clp protease, ATP-binding subunit ClpA n=2 Tax=Neorickettsia RepID=C6V4H7_NEORI Length = 740 Score = 283 bits (724), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 140/273 (51%), Positives = 194/273 (71%), Gaps = 8/273 (2%) Query: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220 LK+Y D+ E A QGK+D +I R +EI RTI++L RRTKNNP+ +GEPGVGKTAIVEGL Sbjct: 169 LKEYCTDMNELAIQGKIDKLIDRKKEIERTIEILLRRTKNNPIYVGEPGVGKTAIVEGLV 228 Query: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280 I++G VP+ LK RV AL +G+L+AG +YRG+FEER++ V+N+++ + N ILFIDE+ Sbjct: 229 HAIVSGNVPQKLKNTRVYALKIGSLLAGTRYRGDFEERIRTVMNEISSSK-NTILFIDEI 287 Query: 281 HTMVGAGK-ADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVA 339 HT+VGAG ++G++DAGN+LKP L +G L C+GATT EY + EKDAAL+RRFQ++ + Sbjct: 288 HTIVGAGSTSNGSIDAGNLLKPFLTKGPLRCIGATTYREYSTHFEKDAALDRRFQRIEIE 347 Query: 340 EPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAAS 399 EPS+ DT+ I+ G K YE H V T ++ L+HRYI +R PDKAIDL+D+ + Sbjct: 348 EPSISDTLNIIDGTKSYYEDFHRVHYTKASLNEIVNLAHRYIPNRSFPDKAIDLMDDLGA 407 Query: 400 SIRMQI-DSKPEELDRLDRRIIQLKLEQQALMK 431 S ++ D K R DR+ I +K ++ L K Sbjct: 408 SYNAELFDVKK----RRDRK-IDIKYVRETLAK 435 Score = 188 bits (477), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 107/305 (35%), Positives = 171/305 (56%), Gaps = 4/305 (1%) Query: 530 KVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA 589 K+ + E LA+ IPV+++ + E L +E+ L + Q+ ++ V ++R Sbjct: 423 KIDIKYVRETLAKRFNIPVAQLNYTVEEILTSLERNLKTAIFDQDNVIEQVVYSLRPGLL 482 Query: 590 GLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGA 649 GL +P+ S+LF G TGVGKTEL K +A + VRIDMSE+ME H+VSRL+GA Sbjct: 483 GLKGE-KPLASYLFGGSTGVGKTELAKQIAKNLC---MQFVRIDMSEYMEGHAVSRLIGA 538 Query: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709 PPGYVG+++G ++ E + ++ S+IL DE+EKAH D NILLQ+LD G +TD G+ F Sbjct: 539 PPGYVGHDKGSFIAEILFKQGSSLILFDEIEKAHADFQNILLQILDYGCITDSTGKKSRF 598 Query: 710 RNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQ 769 +N +++ T+N+GS I+ K + F E ++R+D +VF+ L + Sbjct: 599 KNCIMVCTTNVGSTFIENNSLGFTQDGKKTGKEAQFASFFNKELLDRLDLAIVFNTLDKN 658 Query: 770 HIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPL 829 + I + LEERG ++ ++DE +K L AR ++R I+ I + Sbjct: 659 SVEKIINKSATEIRALLEERGIKLSLTDEVVKSLVARHSSGKISARTIERTIRNDIMQAV 718 Query: 830 AQQIL 834 + ++L Sbjct: 719 SDRML 723 >UniRef50_Q2GGQ4 ATP-dependent Clp protease, ATP-binding subunit ClpA n=26 Tax=Proteobacteria RepID=Q2GGQ4_EHRCR Length = 765 Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 138/247 (55%), Positives = 181/247 (73%), Gaps = 2/247 (0%) Query: 159 QALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEG 218 + L Y ++L E A++GK+D VIGR E+ RT++VL RR KNNP+ +G+PGVGKTAIVEG Sbjct: 181 ETLDSYCVNLNEAAKKGKIDYVIGRAYELERTMEVLLRRRKNNPLYVGDPGVGKTAIVEG 240 Query: 219 LAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFID 278 LA +II G+VP+ LK + +LDMGAL+AG +YRG+FEER+K V+ + +E N ILFID Sbjct: 241 LALKIIEGDVPDQLKKMVIYSLDMGALLAGTRYRGDFEERIKSVIKAIEAKE-NAILFID 299 Query: 279 ELHTMVGAGKAD-GAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVF 337 E+HT+VGAG G++DA N+LKPALARG L C+GATT EY EKD AL RR+QK+ Sbjct: 300 EIHTIVGAGSTSGGSLDASNLLKPALARGTLRCIGATTYKEYNNNFEKDRALARRYQKIN 359 Query: 338 VAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEA 397 V E SV +T+ IL G+K YE HH V+ T+ AI AA LS RYI+ + LPDKA+D+IDEA Sbjct: 360 VEESSVGETLRILDGIKSYYESHHQVRYTNQAIKYAAELSDRYISGKMLPDKAVDVIDEA 419 Query: 398 ASSIRMQ 404 ++ Sbjct: 420 GVYCKLH 426 Score = 258 bits (658), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 124/329 (37%), Positives = 218/329 (66%), Gaps = 12/329 (3%) Query: 529 NKV-TDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRS 587 NKV T ++I +++R T IP S ++ ++ +++ +E+ L + GQ+ A+ + ++I+ + Sbjct: 430 NKVITGSDIEHIISRITEIPCSNLLFNDLDRVKNLEENLKKDIFGQDFAISHLVDSIKIA 489 Query: 588 RAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLV 647 +AGL + N+P+ S+LF GPTGVGKTEL + LAN M ++R DMSE+ME H++S+++ Sbjct: 490 KAGLRNYNKPLASYLFSGPTGVGKTELARQLANHM---GMKLIRFDMSEYMESHAISKII 546 Query: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTV 707 G+PPGYVGY++GG LT+++ R YSV+LLDE+EKAH D++NILLQ++D G +TD G+ V Sbjct: 547 GSPPGYVGYDQGGLLTDSISRHQYSVLLLDEIEKAHSDIYNILLQIMDYGCVTDTYGKKV 606 Query: 708 DFRNTVVIMTSNLGS-DLIQERFGELDYAHMKELVLG----VVSHNFRPEFINRIDEVVV 762 +F N V+I+T+N G+ +L + G + K G + F PEF NR+D ++ Sbjct: 607 NFHNVVIILTTNAGAFELSKSSIG---FIRNKSFTHGDNEKAIERIFSPEFRNRLDAIIS 663 Query: 763 FHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQ 822 F L ++ + I + + +L ++L ++ I ++D+ L L+++GY+ YG R ++ I Sbjct: 664 FSSLDQEVMLRIVKKFIYQLKEQLAKKNVHIDVADDVLMYLAQSGYNDAYGVRNIENIIS 723 Query: 823 QQIENPLAQQILSGELVPGKVIRLEVNED 851 ++++ LA++IL G+L G ++++++ D Sbjct: 724 KKVKKYLAEEILFGKLFNGGNVKIKLDAD 752 >UniRef50_C3XML9 Endopeptidase subunit Clp ATP-binding A n=1 Tax=Helicobacter winghamensis ATCC BAA-430 RepID=C3XML9_9HELI Length = 756 Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 166/414 (40%), Positives = 250/414 (60%), Gaps = 24/414 (5%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINA----GQLR 61 ++ + + L +AQ A ++++ H+ ALL E ++ L G N Q++ Sbjct: 4 ISKELNVVLQNAQKEAKDKGHEYLTLEHIFYALLENE--KITKTLQDCGGNVEIMKKQIQ 61 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELF-VLAAL--ES 118 + Q L P+ + G Q + + RV+ + + +G +++ +LAA+ E Sbjct: 62 RYLKQFLQSYPERQEQGAMPQETLAVTRVIEIM--IGHVKGSQRQQAQVSDLLAAILEEE 119 Query: 119 RGTLADILKAAGATTANITQAIEQMRGG--------ESVNDQGAEDQRQALKKYTIDLTE 170 + A IL A G T N+ + I + + E V D+G E + AL+ Y +LT+ Sbjct: 120 KAFCAQILNAQGITRLNVLEYITENQENFSFNKSIKEEVKDEG-EKRESALEAYCTNLTQ 178 Query: 171 RAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPE 230 A +GK++P+IGR+ EIRR +VL R+ KNNP+L+GEPGVGKTA+ EGLA ++I + P Sbjct: 179 MAREGKIEPLIGREVEIRRCFEVLLRKKKNNPLLVGEPGVGKTAVAEGLALQMIATQSP- 237 Query: 231 GLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKAD 290 L+ + L+MGALVAG KYRG+FE+R+K L D + GNVILFIDE+H ++GAG + Sbjct: 238 -LENTEMYMLNMGALVAGTKYRGDFEKRIK-TLTDEVLELGNVILFIDEIHMLIGAGATN 295 Query: 291 -GAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAI 349 G+MDA N+LKP L G+L C+GA+T EYR +++KD AL RRF K+ V EPS E++I I Sbjct: 296 SGSMDASNLLKPMLGNGKLRCIGASTYAEYRSFLDKDKALSRRFAKIEVKEPSREESILI 355 Query: 350 LRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRM 403 L G+K+ YE +H+V AI LS R++ DR LPDKAID++DE +S ++ Sbjct: 356 LEGVKKHYEKYHNVSFNSEAIELIVDLSIRHLHDRFLPDKAIDIMDEVGASYKL 409 Score = 254 bits (650), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 138/333 (41%), Positives = 208/333 (62%), Gaps = 19/333 (5%) Query: 515 AATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574 A+ +L+GK+ KV+ I +++A IP + ++ L +E+ L R+ GQ+ Sbjct: 405 ASYKLDGKS-----GKVSLQSIKKMVATMAKIPEIEATKDDKAVLKGLEKHLKSRIFGQD 459 Query: 575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALA---NFMFDSDEAMVR 631 A+ V +A++R++AGL PN+PIGSFLF GP+GVGKTEL K LA N F+ R Sbjct: 460 NAIVEVVSALKRNKAGLGAPNKPIGSFLFSGPSGVGKTELAKELAKALNINFE------R 513 Query: 632 IDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILL 691 +DMSE+ME+ S S+L+GA GYVGYE+GG LTE +++ P++++LLDEVEKAHPDV N+ L Sbjct: 514 LDMSEYMERISSSQLIGAAAGYVGYEKGGILTEMIKKNPHTLLLLDEVEKAHPDVLNVFL 573 Query: 692 QVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVL-GVVSHNFR 750 QV+D GRLTD G ++DF + ++I+TSN+GS + L + L + +F Sbjct: 574 QVMDYGRLTDNNGESIDFSSVILILTSNVGS----KEAPVLGFKQDTNLRFSSAIKDHFS 629 Query: 751 PEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDP 810 PEF NR+D ++ F+PL + I I + L ++ E+ EI + + + L++ G+D Sbjct: 630 PEFRNRLDAIIAFNPLSHKEILKIVDKNIVDLNNQILEKKVEIILDKSSKEYLAKIGFDV 689 Query: 811 VYGARPLKRAIQQQIENPLAQQILSGELVPGKV 843 GARPL IQ++I+N L+ +L GEL G V Sbjct: 690 ELGARPLGLVIQKEIKNILSDAMLFGELSKGGV 722 >UniRef50_C5YMW4 Putative uncharacterized protein Sb07g002440 n=1 Tax=Sorghum bicolor RepID=C5YMW4_SORBI Length = 818 Score = 280 bits (717), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 154/278 (55%), Positives = 204/278 (73%), Gaps = 6/278 (2%) Query: 566 LHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDS 625 LH R+IGQ+EAV AVS AIRR+R GL+DP RPI SF+F GPTGVGK+EL KA+A + + S Sbjct: 520 LHRRIIGQDEAVTAVSRAIRRARVGLSDPRRPIASFVFAGPTGVGKSELAKAVAAYYYGS 579 Query: 626 DEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGY-LTEAVRRRPYSVILLDEVEKAHP 684 ++AMVR+DMSE MEKH+V+RLVGAPPGYVG+ EGG LTEAVRRRP+S++LLDEV+KAHP Sbjct: 580 EDAMVRLDMSELMEKHAVARLVGAPPGYVGHGEGGGQLTEAVRRRPHSLVLLDEVDKAHP 639 Query: 685 DVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGV 744 +V ++LLQVLDDGRLTDG GRTVDFRNT++IMTSN+G + + KE+V Sbjct: 640 EVMDVLLQVLDDGRLTDGMGRTVDFRNTLIIMTSNIGGGNGGSG--DGSRSSSKEVVEEE 697 Query: 745 VSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGY---EIHISDEALK 801 + FRPEF+NR+DE +VF PL IA + + + R+ E+ +++ + Sbjct: 698 MKRYFRPEFLNRLDETIVFRPLTRVDGKEIAAVLVSDVAARVSRETMMVVELRVTERFMD 757 Query: 802 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELV 839 L+ E G+DP YGAR L+RA+ +E+ LA ++L GE+V Sbjct: 758 LVVEEGFDPWYGARALRRAVVMLLEDTLADKLLDGEIV 795 Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 142/306 (46%), Positives = 188/306 (61%), Gaps = 54/306 (17%) Query: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220 L +Y DLT A +GKLDPVIGR ++I + +Q+L R+ KNNP LIGEPGVGKTA+VE LA Sbjct: 252 LDEYGTDLTTLANKGKLDPVIGRQKQIDQVVQILSRKGKNNPCLIGEPGVGKTAVVESLA 311 Query: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280 Q I G+VPE ++G++ L Sbjct: 312 QLIAMGDVPETMQGKKF-----------------------------------------TL 330 Query: 281 HTMVGAGKA-DGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVA 339 HT+VGAG A +GA+DA N+LKPALARGEL C+GATT D Y ++IEKD ALERRF++V V Sbjct: 331 HTLVGAGAAVEGAIDAANILKPALARGELQCIGATTTDGYMKHIEKDPALERRFRQVKVP 390 Query: 340 EPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAAS 399 EP VE+ I IL+GL+ERYE HH VQ D A+ AAA LSH+YI+DR LPDKAIDLIDEA S Sbjct: 391 EPMVEEAIEILKGLRERYETHHKVQYADEALSAAAELSHKYISDRFLPDKAIDLIDEAGS 450 Query: 400 SIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELE 459 +R++ ++P +L E Q + E + +K++ D + E K ++ + E Sbjct: 451 LVRLR-HAQP-----------KLPKELQDFVTEIKKITKEKCDTIRIENFKKAKELRDRE 498 Query: 460 EEWKAE 465 E K++ Sbjct: 499 LELKSQ 504 >UniRef50_C5LIJ2 ATP-dependent Clp protease, putative n=3 Tax=Perkinsus marinus ATCC 50983 RepID=C5LIJ2_9ALVE Length = 895 Score = 279 bits (714), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 156/331 (47%), Positives = 216/331 (65%), Gaps = 24/331 (7%) Query: 528 RNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRS 587 R +V ++A+ +A+WTGIP+ + + E +LL ME+ L RVIGQ A AV+ AIRR+ Sbjct: 557 RIEVNANDVAQTVAQWTGIPLEELTKDESARLLHMEERLDSRVIGQKRATSAVARAIRRA 616 Query: 588 RAGL--ADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSD-EAMVRIDMSEFMEKHSVS 644 R G+ RP FLF GPTGVGKTEL KAL++ F + M+R+DMSEFME+HSVS Sbjct: 617 RVGVRGIGNKRPTACFLFCGPTGVGKTELSKALSDEYFGEEGRNMIRLDMSEFMERHSVS 676 Query: 645 RLVGAPPGYVGYEE--GGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702 +L+G+PPGYVGY+ GG LT+ VRR+P+S++L+DEVEKAHPDV NILLQV+DDGRLTD Sbjct: 677 KLIGSPPGYVGYDSNSGGVLTDRVRRQPHSLVLIDEVEKAHPDVLNILLQVMDDGRLTDS 736 Query: 703 QGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 762 GR DF N +++MTSN+GS M++L +FRPEFINRIDEV+ Sbjct: 737 HGRLADFSNVILVMTSNVGSS-------------MEDL-----KRHFRPEFINRIDEVIA 778 Query: 763 FHPLGEQHIASIAQIQLKRLYKRL-EERGYEIHISDEALKLLSENGYDPVYGARPLKRAI 821 F L E+ I I + + RL L E+ ++ ++D L + GY +GAR L R + Sbjct: 779 FDSLTEEDIVRIVGLYVSRLQAALKEQHSIDLKVTDGLTAALGKEGYSAEFGARHLNRVM 838 Query: 822 QQQIENPLAQQILSGELVPGKVIRLEVNEDR 852 Q +IE+P+A+ IL E+ G+ + + + +R Sbjct: 839 QARIEDPIAELILREEIHRGEELIADYDSER 869 Score = 269 bits (687), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 137/244 (56%), Positives = 171/244 (70%), Gaps = 1/244 (0%) Query: 167 DLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIING 226 +LT A +GKL +GRD EI R IQVL R TKNNPVL+GEPGVGKTA+ EG+A+ I G Sbjct: 311 NLTALAREGKLLKCVGRDAEIGRMIQVLSRMTKNNPVLLGEPGVGKTAVAEGMAELIARG 370 Query: 227 EVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGA 286 EVP L G + + +G+L+AG KYRGEFEERLK ++ + +G +IL IDELHT+VGA Sbjct: 371 EVPTHLAGVAIWDVSIGSLLAGTKYRGEFEERLKRLVKEATDADGKIILLIDELHTIVGA 430 Query: 287 G-KADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVED 345 G DGA+DA N+LKPAL+RGEL +GATT EY +YI KD ALERRFQ V V EP+ Sbjct: 431 GATGDGAIDAANILKPALSRGELRVIGATTQSEYDKYIAKDPALERRFQPVVVPEPTQAQ 490 Query: 346 TIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQI 405 + +L G+ YE HH V+ TD AI A LS RYI R+LPD A D +DEAA+ R+Q Sbjct: 491 AVDMLMGVASLYEEHHFVRFTDDAIEACVKLSSRYIPSRRLPDSAFDAMDEAAARKRIQQ 550 Query: 406 DSKP 409 ++P Sbjct: 551 GARP 554 >UniRef50_Q98IM7 Probable ClpA/B-type protease n=6 Tax=Rhizobiales RepID=Q98IM7_RHILO Length = 945 Score = 277 bits (709), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 185/475 (38%), Positives = 273/475 (57%), Gaps = 25/475 (5%) Query: 26 NQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQALNRLPQVEGTGGDVQPSQ 85 N ++E +H + L+ E V ++ AG++ +L D+ +A+++LP G + S Sbjct: 39 NPYVELVHFVQQLVLSERSDVQMIVADAGLDVSRLTADMTRAIDKLPY--GATSVEEFSD 96 Query: 86 DLVRVLNLCDKLAQ-KRGDNFISSELFVLAALES---RGTLADI------LKAAG--ATT 133 + + LA + G + S +LA L++ G ++ I + A G A Sbjct: 97 HIFHAIQEGWSLATLEFGVEEVRSAHILLACLKTPALEGLVSKISAEFDKIDADGVIARF 156 Query: 134 ANITQAIEQMRGGESVNDQGAEDQRQ-------ALKKYTIDLTERAEQGKLDPVIGRDEE 186 A++T+ + G AE + AL KY DLT+RA GK+DPVIGRD E Sbjct: 157 ADVTEG--SLEAGSPPAAAAAETPMKRGLGGDSALAKYATDLTQRARDGKIDPVIGRDPE 214 Query: 187 IRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALV 246 IR+ + +L RR +NNP+L GE GVGKTA+VEG A RI G+VP L+ V LD+G + Sbjct: 215 IRQIVDILMRRRQNNPILTGEAGVGKTAVVEGFALRIAQGDVPPTLQNVSVRMLDVGLMQ 274 Query: 247 AGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARG 306 AGA +GEFE+RLK V++++ E +ILFIDE HT++GAG A G DA N+LKPALARG Sbjct: 275 AGASVKGEFEKRLKAVIDEVQASETPIILFIDEAHTLIGAGGAAGTGDAANLLKPALARG 334 Query: 307 ELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQIT 366 EL + ATT EY+Q+IEKD AL RRFQ V + EPS + +LRG+ E HH VQI Sbjct: 335 ELRTIAATTWAEYKQHIEKDPALTRRFQVVKIEEPSETVAVLMLRGVAGVLEQHHKVQIL 394 Query: 367 DPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQ 426 D AI A+ +LSHRYI RQLPDKA+ L+D A + + + + P E++ + RR L++E+ Sbjct: 395 DEAIEASVSLSHRYIPARQLPDKAVSLLDTACARVAVSQHATPAEVEDILRRRQALEVEE 454 Query: 427 QALMKESDEASK--KRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAEL 479 + +E+ + R + L++ E + + W EKA ++ ++A+L Sbjct: 455 GIIGREAAIGIEVVDRQARVEAGLAETETTLAAAQARWDREKALVAEILDLRAKL 509 Score = 250 bits (639), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 147/399 (36%), Positives = 228/399 (57%), Gaps = 28/399 (7%) Query: 461 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 520 E K K+ + T+ K E A + DLAR+ EL + EL + + Sbjct: 554 EPKGSKSKSAKTKAAKMEAVAAHEPVPVPDSAADLARLREL----MAEL-------AEAQ 602 Query: 521 GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAV 580 G+T +L + +A +A V+ WTGIP RM+ S+ EK L++ L RV+GQ+ A++ + Sbjct: 603 GETPLILPSVDRNA-VAAVVQDWTGIPTGRMLSSQTEKALKLAATLAERVVGQDHAMEMI 661 Query: 581 SNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEK 640 + ++ SRAGL P +P+G FL GP+GVGKTE ALA ++ ++ ++ I+MSEF E Sbjct: 662 ARRVQTSRAGLGAPEKPVGVFLLCGPSGVGKTETALALAETLYGGEQNLISINMSEFQEA 721 Query: 641 HSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLT 700 H+VS L GAPPGYVGY +GG LTEAVRR+PYSVILLDEVEKAHPDV I QV D G + Sbjct: 722 HTVSTLKGAPPGYVGYGKGGILTEAVRRKPYSVILLDEVEKAHPDVHEIFFQVFDKGMMD 781 Query: 701 DGQGRTVDFRNTVVIMTSNLGSDLIQER---------FGELDYAHMKELVLGVVSHNFRP 751 D +GR +DF+NT++++TSN+GS++I +R +LD A + G + F Sbjct: 782 DSEGRRIDFKNTLILLTSNVGSEVIMDRTKNGTLRTGMDDLDTA-----LRGPLLKVFPA 836 Query: 752 EFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERG-YEIHISDEALKLLSENGYDP 810 F+ R+ + ++PL + I +I + Q ++ +RL+ E+ I D + ++ + Sbjct: 837 AFLGRV-VTIPYYPLSDAMIEAITRHQFGKIARRLKATNDAELVIGDGVMDMVKARCTEI 895 Query: 811 VYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVN 849 G R + + + L++ +L+ L K+ ++ V Sbjct: 896 ESGGRMIDAILTNTLLPELSRGVLNRSLEGKKMTKVTVG 934 >UniRef50_UPI0001C372BC ATPase n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C372BC Length = 750 Score = 276 bits (706), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 139/266 (52%), Positives = 192/266 (72%), Gaps = 4/266 (1%) Query: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220 L +Y +T+ Q K DP+IGR+ E+++ + L RRTK+NP LIGE GVGKTAIV+G+A Sbjct: 164 LFRYGRHITDSNVQAKRDPLIGREAEVQQVLMTLSRRTKSNPCLIGEAGVGKTAIVDGVA 223 Query: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280 I+G+VPE L+ + + ALD+ AL++GAKYRG+FEERL+G + + A GN+ILFIDE+ Sbjct: 224 GLFISGDVPEALRNKYIFALDLTALISGAKYRGDFEERLRGCIEE-ASSSGNIILFIDEI 282 Query: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340 HT+VGAG A+GA+DA N++KP LAR EL +GATT DEYR+ IEKD ALERRFQ V V E Sbjct: 283 HTIVGAGAAEGAIDAANIMKPQLARSELQVIGATTFDEYRKTIEKDKALERRFQPVTVNE 342 Query: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDE--AA 398 PSV + + +++G++ YE +H+V I+D A + S R+I DR LPDKAID +DE AA Sbjct: 343 PSVGECVEMIKGIRTAYEKYHNVIISDEAAEFSVRTSARFINDRFLPDKAIDTLDEACAA 402 Query: 399 SSIRMQIDSKPEELDRLD-RRIIQLK 423 ++IR + + + E+ D +I LK Sbjct: 403 AAIRNRENCRKYEISCGDIAHVISLK 428 Score = 251 bits (642), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 139/332 (41%), Positives = 200/332 (60%), Gaps = 6/332 (1%) Query: 528 RNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRS 587 + +++ +IA V++ TGIP S + + +E+ L R+ G + + V+ A+ RS Sbjct: 413 KYEISCGDIAHVISLKTGIPESSITAFSDCRAAGIEKLLTRRITGHRDIIRKVAEAVYRS 472 Query: 588 RAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLV 647 +GL D RP SFLF GPTGVGKTEL KALA F S + +RIDMSEFMEK S+++L+ Sbjct: 473 DSGLKDSRRPAASFLFAGPTGVGKTELAKALAEAAFGSSGSFIRIDMSEFMEKSSITKLI 532 Query: 648 GAPPGYVGYEEG-GYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRT 706 GAPPGY GY EG L E VRR PYS++L DE+EKA +V N+LLQ+LD+G +TD + Sbjct: 533 GAPPGYAGYSEGRSNLCEQVRRHPYSLVLFDEIEKADTEVLNLLLQILDEGVITDSEMHK 592 Query: 707 VDFRNTVVIMTSNLGSDLIQER----FGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 762 + FR+ +IMTSN+G+DL+ FG + E V + F PEFINRIDE+ V Sbjct: 593 ISFRSCFIIMTSNIGADLVTGNSSMGFGS-SAETVNERVTDRIRQYFSPEFINRIDEIAV 651 Query: 763 FHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQ 822 F L + I + L L +R + G + S++ +++ S YGARP++R I Sbjct: 652 FGKLNSCDLLGITRNLLSDLKRRSQSIGITVEYSEKTVEIFSRTKDTDRYGARPIRRRIT 711 Query: 823 QQIENPLAQQILSGELVPGKVIRLEVNEDRIV 854 IEN LAQ I++ E+ G +R++ + I+ Sbjct: 712 DMIENKLAQMIVNREVAKGDSVRVDTSNGEIM 743 >UniRef50_C5ZY74 ATP-dependent Clp protease, ATP-binding subunit ClpA n=2 Tax=Helicobacter RepID=C5ZY74_9HELI Length = 746 Score = 276 bits (705), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 171/433 (39%), Positives = 259/433 (59%), Gaps = 32/433 (7%) Query: 6 LTNKFQLALADAQSLA--LGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTD 63 ++ + L AQS A LGH+ +E H+ +LL+ + +V + G N L++ Sbjct: 4 ISKELNYILQAAQSRAKHLGHEYLTLE--HIFHSLLDSQ--TVIKAIQECGGNIKALKSQ 59 Query: 64 INQALNRLPQVEGTGGDVQPSQDL--VRVLNLCD---KLAQKR----GDNFISSELFVLA 114 I + L Q ++ P + L RV+ + K AQ++ GD +LA Sbjct: 60 IERYLTHFLQSHPDASEL-PIETLAVTRVIEIMVSHVKGAQRKEAQVGD--------LLA 110 Query: 115 AL--ESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQ--ALKKYTIDLTE 170 A+ E + +LKA G T NI + I + + + ++ +Q L+KY I+LT+ Sbjct: 111 AILEEDKAFCTQLLKAQGITRLNILEYITENQDTQQAQKFEKDENKQESILEKYCINLTQ 170 Query: 171 RAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPE 230 A++GK+DP+IGRD+EI R ++VL RR KNNP+L+GEPGVGKTAI EGLA I+ + Sbjct: 171 EAKEGKIDPIIGRDKEIERCLEVLLRRKKNNPLLVGEPGVGKTAIAEGLA--IVLNQENN 228 Query: 231 GLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKAD 290 L G + L+MGALVAG KYRG+FE+R+K + ++ +++ NVILFIDE+H ++GAG + Sbjct: 229 PLFGNEIFMLNMGALVAGTKYRGDFEKRIKALSEEVLERK-NVILFIDEIHMLIGAGATN 287 Query: 291 -GAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAI 349 G+MDA N+LKP L G+L C+GA+T EYR +++KD A RRF K+ V EPS E+ + I Sbjct: 288 SGSMDASNLLKPMLGSGKLRCIGASTYAEYRNFLDKDKAFSRRFAKIDVDEPSQEEAVLI 347 Query: 350 LRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKP 409 L+G+K+ YE HH+V + A LS RY+ DR LPDKAID+IDE ++ ++ S Sbjct: 348 LQGVKKYYEKHHNVIYPLETLRLAVELSSRYLHDRFLPDKAIDVIDEVGAAYKLASKSGK 407 Query: 410 EELDRLDRRIIQL 422 L + + + ++ Sbjct: 408 VSLSSIKQMVAKM 420 Score = 271 bits (693), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 141/342 (41%), Positives = 212/342 (61%), Gaps = 23/342 (6%) Query: 515 AATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574 AA +L K+ KV+ + I +++A+ IP + ++ L +++ L R+ GQ+ Sbjct: 397 AAYKLASKS-----GKVSLSSIKQMVAKMAKIPEIEATKDDKNLLKNLQKHLQSRIFGQD 451 Query: 575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 634 A+ + A++R+RAGL PN+PIGSFLF GP+GVGKTEL K +A + + E RIDM Sbjct: 452 LAIKEIVTALKRNRAGLGAPNKPIGSFLFSGPSGVGKTELAKEIAKALGINFE---RIDM 508 Query: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694 SE+MEK+S S L+GAP GYVGY++GG LTE +++ P++++LLDE+EKAHPDV NI LQV+ Sbjct: 509 SEYMEKYSSSGLIGAPAGYVGYDKGGILTEMIKKNPHTLLLLDEIEKAHPDVLNIFLQVM 568 Query: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSD------LIQERFGELDYAHMKELVLGVVSHN 748 D+ +LTD G + DF + ++IMTSN+GS Q+ + + A + N Sbjct: 569 DNAKLTDNNGESADFSSVILIMTSNVGSKEAPTLGFTQDSVAKFNSA---------IKDN 619 Query: 749 FRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGY 808 F PEF NR+D +V F+PL E I I + + L K++ + I + A + L++ GY Sbjct: 620 FTPEFRNRLDAIVAFNPLSETEILKIVEKNINDLNKQIAPKNIHILLDKSAKEQLAKLGY 679 Query: 809 DPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNE 850 +P GARPL IQ++I+NPL+ +L GEL G + N+ Sbjct: 680 NPELGARPLGLVIQEKIKNPLSDLMLFGELEKGGEVIFSYNK 721 >UniRef50_A5MZQ1 ClpA n=7 Tax=Clostridium RepID=A5MZQ1_CLOK5 Length = 746 Score = 276 bits (705), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 171/425 (40%), Positives = 252/425 (59%), Gaps = 36/425 (8%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLH-LMSALLNQEGGSVSPLLTSAGINAGQ 59 M+LD++ N+ A A + A +++ P H L +AL EG + + S G N Sbjct: 1 MKLDKIVNEIITA---AYNEARYCKHEYFTPEHVLYAALFFPEGIDI---IESCGGNVKN 54 Query: 60 LRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNL----------CDKLAQKRGDNFIS-- 107 ++ D+ Q N +E T + + + + + N+ +K K GD FIS Sbjct: 55 IKRDLLQYFN--DNIETT--EKKEPLETIGLQNILTSAGEHVLAAEKEVIKLGDIFISIY 110 Query: 108 --SELFVLAALESRGTL-ADILK--AAGATTANITQAIEQMRGGESVNDQGAEDQRQALK 162 + F L +G DIL G + IE+ + + D+ ED + L Sbjct: 111 DEEQSFASFFLRKQGIRRIDILNYITHGISATMFDYNIEE--DSKYLVDE--EDTQSVLN 166 Query: 163 --KYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220 + +DLT++A+ G +DP+IGR++ I RTIQVL RR KNNP+ +GEPGVGKTAI EGLA Sbjct: 167 IGDFAVDLTQKAKMGDMDPLIGREDIIYRTIQVLSRRNKNNPIHVGEPGVGKTAITEGLA 226 Query: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280 + I+ +VP LK ++ +LDMG+++AG KYRG+FE+R+K L + K E I++IDE+ Sbjct: 227 KLIVENKVPNLLKDSKIYSLDMGSILAGTKYRGDFEDRIKNTLKKIQK-EDKPIVYIDEI 285 Query: 281 HTMVGAGKAD-GAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVA 339 HT++GAG G++DA N+LKP L G++ +G+TT DEY++ EKD AL RRFQ++ V Sbjct: 286 HTIIGAGSVSGGSLDAANILKPFLTSGKIKFIGSTTYDEYKKIFEKDRALARRFQRIEVP 345 Query: 340 EPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAAS 399 EPSVEDT +IL G+KE YE H+V + A+ +A LS +YI DR LPDKAID+IDE + Sbjct: 346 EPSVEDTYSILSGIKEHYEKFHNVIYKEEALKSAVDLSVKYINDRFLPDKAIDVIDETGA 405 Query: 400 SIRMQ 404 +R+ Sbjct: 406 YVRLH 410 Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 130/321 (40%), Positives = 202/321 (62%), Gaps = 8/321 (2%) Query: 536 IAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPN 595 I + +A IP + + E + L +++ L +V GQ EA+D++ AI+RSRAG + N Sbjct: 424 IEKTIAAMAKIPEQTLSQDETKVLKDLDKVLKKKVFGQEEAIDSLVRAIKRSRAGFNEDN 483 Query: 596 RPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVG 655 + + S LF+GPTGVGKTE+ K LA + + +R DMSE+ EKH+V+RLVG+PPGYVG Sbjct: 484 KTVASLLFVGPTGVGKTEISKQLAKAL---NIPFIRFDMSEYQEKHTVARLVGSPPGYVG 540 Query: 656 YEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVI 715 YEEGG LT+ +R+ PY V+LLDE+EKAHPDV NILLQ++D LTD G+ DF+NT +I Sbjct: 541 YEEGGLLTDVIRKTPYCVLLLDEIEKAHPDVLNILLQIMDYATLTDNTGKKTDFKNTTII 600 Query: 716 MTSNLGSDLIQER---FGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIA 772 MTSN G+ + + FGE K+ + V+ F PEF NR+D+++ F+ + ++ Sbjct: 601 MTSNAGARSVGKALMGFGER--IVKKDAISEEVNRIFSPEFRNRLDDIIYFNSMNDKMAY 658 Query: 773 SIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQ 832 +A+ + + K+L + +I+++D+ + LS+ G YGAR + R +QQ I+ + Sbjct: 659 LVAKKVVGQFEKQLLSKDIKINVTDKCYRWLSKKGVSLEYGAREIIRIVQQDIKPYFVDK 718 Query: 833 ILSGELVPGKVIRLEVNEDRI 853 +L + + + ++V D I Sbjct: 719 VLFNDNIENTISIIDVENDSI 739 >UniRef50_C4I651 Type VI secretion ATPase, ClpV1 family n=52 Tax=Proteobacteria RepID=C4I651_BURPS Length = 979 Score = 275 bits (704), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 146/320 (45%), Positives = 199/320 (62%), Gaps = 2/320 (0%) Query: 146 GESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLI 205 GE A L++Y DLT RA G +DPVIGR+ EIR VL RR +NNP+L Sbjct: 176 GEPSGATRAAPNGSPLERYCTDLTARARDGDIDPVIGRELEIRTMTDVLLRRRQNNPLLT 235 Query: 206 GEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLND 265 GE GVGKTA+VEGLA I NG+VP L R++++D+GAL+AGA +GEFE RLKGVL Sbjct: 236 GEAGVGKTAVVEGLALAIANGDVPPKLADVRLMSVDVGALLAGAGMKGEFESRLKGVLEA 295 Query: 266 LAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEK 325 AK VILF+DE+HT++GAG G DA N+LKPALARG + +GATT EY+++IEK Sbjct: 296 AAKSVAPVILFVDEIHTLIGAGGQAGTGDAANLLKPALARGTIRTIGATTWAEYKRHIEK 355 Query: 326 DAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQ 385 D AL RRFQ + V EP + ++RG+ + HH V + D AI AA LSHRYI R Sbjct: 356 DPALTRRFQVLQVPEPEEPAAVHMVRGVARAFARHHRVTVRDEAIRAAVALSHRYIPSRH 415 Query: 386 LPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEA--SKKRLDM 443 LPDKAI L+D A + + + + P EL + +R++ + E+ L +E+ + + L Sbjct: 416 LPDKAISLLDTACARVALSQHAAPGELQHVRQRLLAARAERDLLEQEARIGLDAGQSLAA 475 Query: 444 LNEELSDKERQYSELEEEWK 463 + E + + + ++ WK Sbjct: 476 VRERIEALAAEEAAVDARWK 495 Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 128/286 (44%), Positives = 185/286 (64%), Gaps = 9/286 (3%) Query: 508 ELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELH 567 ELE+ L AA +G L+ +V +A +A+++A WTGIPV RMM E + + L Sbjct: 603 ELERALAAA---QGDAP-LVFPEVDEAIVAQIVADWTGIPVGRMMTDEVAAVRALPATLE 658 Query: 568 HRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDE 627 RVIGQ +A+ + ++ +RAGLADP +P+G FL GP+GVGKTE ALA ++ ++ Sbjct: 659 ARVIGQPDALRQIGERVQTARAGLADPKKPLGVFLLAGPSGVGKTETALALAEALYGGEQ 718 Query: 628 AMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVF 687 +++ I+MSE+ E H+VS L GAPPGYVGY EGG LTEAVRRRPYSV+LLDE+EKAH DV Sbjct: 719 SLITINMSEYQEAHTVSGLKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDEIEKAHRDVH 778 Query: 688 NILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGEL----DYAHMKELVLG 743 + QV D G + DG GR +DFRNT +++TSN+G++L + D A +++ ++ Sbjct: 779 ELFFQVFDKGYMEDGDGRYIDFRNTTILLTSNVGAELSASLCADASLAPDAAALRDALMP 838 Query: 744 VVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEER 789 + F F+ R+ VV + PL + +A I ++ L R+ R+ ER Sbjct: 839 ELLKVFPAAFLGRV-SVVPYRPLEARALARIVRLHLDRVVARMAER 883 >UniRef50_Q73KU3 ATP-dependent Clp protease, ATP-binding subunit ClpA n=1 Tax=Treponema denticola RepID=Q73KU3_TREDE Length = 785 Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 132/266 (49%), Positives = 191/266 (71%), Gaps = 1/266 (0%) Query: 146 GESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLI 205 E N ++ Q+ L+++T++LTE+A +G+L P+IGR+EEI RTIQ+L R+ KNNP+ + Sbjct: 176 SEEKNTDKSKAQKTYLERFTVNLTEKARKGRLSPIIGREEEIERTIQILCRKQKNNPIHV 235 Query: 206 GEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLND 265 G GVGKTAI EGLAQRI +VP LK + +L + L+AGAK+RG+FEERLK ++++ Sbjct: 236 GGAGVGKTAITEGLAQRITANKVPSFLKNANIYSLSLSDLLAGAKFRGDFEERLKRIVSE 295 Query: 266 LAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEK 325 +++ E N ILFIDE+HT+V A G ++A ++LKP LA G++ C+GATT +EY ++ K Sbjct: 296 ISR-EKNAILFIDEIHTIVNANSGGGGIEAPDLLKPILANGKVRCIGATTFEEYNKHFTK 354 Query: 326 DAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQ 385 DAAL RRFQK+ + EP+ E+ + IL+GL+E YE H V +D + +A LS +I DR Sbjct: 355 DAALARRFQKIDIEEPNEEEAVKILKGLRESYENFHKVHYSDEVLESAVHLSAIHIRDRF 414 Query: 386 LPDKAIDLIDEAASSIRMQIDSKPEE 411 LPDKAIDLIDEA + I+++ D + E Sbjct: 415 LPDKAIDLIDEAGALIKIRADKEKNE 440 Score = 265 bits (676), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 132/321 (41%), Positives = 204/321 (63%), Gaps = 4/321 (1%) Query: 531 VTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590 V+ ++I +++A+ IP R+ +E EKL E+ L ++ GQ+ A++ V+ A++RSRAG Sbjct: 456 VSLSDIDKIVAKTAKIPEQRVSVNETEKLRHFEEILSKKIFGQDTAIEGVTKAVKRSRAG 515 Query: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAP 650 ++P+ +FLF+GPTGVGKTEL K LA + ++R DMSE+ EKH+VSRL+G+P Sbjct: 516 FRSKDKPVANFLFVGPTGVGKTELAKTLAEEL---GIPLLRFDMSEYQEKHTVSRLIGSP 572 Query: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFR 710 PGYVG+EEGG LT AV++ P +V+LLDE+EKAH D++NILLQ++D LTD QGR F Sbjct: 573 PGYVGFEEGGLLTSAVQKSPNAVLLLDEIEKAHADIYNILLQIMDYATLTDNQGRKAAFN 632 Query: 711 NTVVIMTSNLGSDLIQERFGELDYAHMKELVLG-VVSHNFRPEFINRIDEVVVFHPLGEQ 769 N ++IMTSN GS I + + E + V F PEF NR+D ++ F PL Q Sbjct: 633 NIILIMTSNAGSSNIGKPLIGFGGERISESAVDEAVEKTFTPEFRNRLDAIIKFGPLTMQ 692 Query: 770 HIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPL 829 ++ I + +++++ +L E+ + + D+ + LL+E GY +GAR R ++ + PL Sbjct: 693 VMSLIIKKEVEKIRSQLAEKEISLELEDDVIPLLAEKGYSEEFGARNAARLVEDEFVTPL 752 Query: 830 AQQILSGELVPGKVIRLEVNE 850 IL GE G ++ ++ + Sbjct: 753 TDMILFGETKKGSSVKCQIGD 773 >UniRef50_A7AW26 Chaperone clpB, putative n=1 Tax=Babesia bovis RepID=A7AW26_BABBO Length = 833 Score = 272 bits (696), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 226/748 (30%), Positives = 358/748 (47%), Gaps = 117/748 (15%) Query: 143 MRGGESVNDQGAEDQRQ-ALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNN 201 +RG +D G Q A+++ +LTE A+ G + +GR+ E+ R L R KNN Sbjct: 143 LRGIHQRSDAGKPKVDQNAVEECLYNLTEAAKNGSGNVFVGRENELERLKGSLNRMRKNN 202 Query: 202 PVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKG 261 +LIGEPGVGKTA+VE LA ++ E P V +LD+ L +G RGE E +LK Sbjct: 203 VLLIGEPGVGKTALVERLAVDML-LEDPN----ITVYSLDLCRLYSGQGTRGELEAKLKS 257 Query: 262 VLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQ 321 + + + + G ILFIDE+H ++ + ++ N+LKP + + +G+TT EY Q Sbjct: 258 IFDTV--KNGKSILFIDEIHHLIQ--NQENGVNVTNLLKPIMTSTLVKIIGSTTAKEYHQ 313 Query: 322 YIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYI 381 Y +D A ERRF+ + + E S ++T+AIL G + E +H V+ITD A+VA+ LS R+I Sbjct: 314 YFRRDRAFERRFEILRLHENSADETLAILHGSRPSLEDYHGVKITDDALVASVELSTRFI 373 Query: 382 ADRQLPDKAIDLIDEAA--SSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439 +R LPDKAIDL+DEAA S + + EL R II AL++ K Sbjct: 374 PNRYLPDKAIDLLDEAAMLSKRKRSCSNDLFELLRHKTGIIS------ALLR-----GKS 422 Query: 440 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499 D LN LS+ E +E +K+ L Q + E+ G+L + S Sbjct: 423 GNDQLNRVLSEIE----SMESRYKSLHGKLRDVQQQQQNHEKN----------GNLTKAS 468 Query: 500 ELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDA------------------------- 534 EL+ KIPE+ + QL+ ++ + D+ Sbjct: 469 ELKNHKIPEI---IRLIVQLQSDIKMVINKTIEDSKDMLPVDMLNDGNTGVSPASDPDVF 525 Query: 535 --------EIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRR 586 +IA L++ TGIPVS ++ S+ + Q+L + V+GQNEAV I Sbjct: 526 SGVYVDRIDIASALSQSTGIPVSVVLRSQMGHYEQAVQQLSNIVLGQNEAVYKTLLHIYM 585 Query: 587 SRAGLADPNRPIGSFLF-LGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSR 645 + +A R IG+ L+ +GP GVGK L ++ MF A+ I S + ++ + Sbjct: 586 YSSSIAS-GRKIGAALYYVGPPGVGKRLLLNHVSR-MFGM--ALKYICGSNLVSSNATNI 641 Query: 646 LVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGR 705 LVG+PPGY+G+ EGG L E ++ PY ++ ++ H +V N+L+ +D+G L D QG Sbjct: 642 LVGSPPGYIGHREGGMLCEWIKDHPYGIVAFEDAHLLHVNVVNLLIGAIDNGFLVDNQGD 701 Query: 706 TVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHP 765 + R + SN D+ + L+ D+V+ F P Sbjct: 702 QCNLRQCFFVFVSN-------------DHEQLSPLIK------------QNADDVISFEP 736 Query: 766 LGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQI 825 L ++ + I +L + ++ S AL E+ Y G + + I + + Sbjct: 737 LSKESVERIICKELASI------DVVKLRASKAAL----EHLYHLAIGTKSIPNLIYRTL 786 Query: 826 ENPLAQQILSGELVPGK----VIRLEVN 849 + +A ++SG + G +++ EVN Sbjct: 787 GSSIANLVVSGRVPIGASGELIMKSEVN 814 >UniRef50_C5IFU1 Heat shock protein n=1 Tax=Eimeria tenella RepID=C5IFU1_EIMTE Length = 484 Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 134/346 (38%), Positives = 214/346 (61%), Gaps = 39/346 (11%) Query: 535 EIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADP 594 ++A +L++WTGIP+ +M E E ++LR+ L RV+GQ+ AV AV++A+ RAGL+ Sbjct: 82 DVAHILSQWTGIPMGKMTEDEVSRVLRLADILSLRVVGQDRAVKAVADALAIQRAGLSPK 141 Query: 595 NRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYV 654 N+P+G+FLFLG +GVGKTEL KA+A MFDS++ ++R+DM E+ E HS+SRL+G PPGY+ Sbjct: 142 NKPLGTFLFLGSSGVGKTELAKAVAEEMFDSEKNLIRLDMVEYQEAHSISRLIGPPPGYM 201 Query: 655 GYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVV 714 G +EGG LTEAVR++P+SV+L DEVE AH +++++LL +LD+G L+D +G VDF N ++ Sbjct: 202 GNDEGGQLTEAVRQKPHSVVLFDEVENAHKNLWSLLLPMLDEGHLSDSKGNRVDFTNCLI 261 Query: 715 IMTSNLGSDLIQERFGEL---------DYA------------------------------ 735 I+TSN+G I + + E+ D A Sbjct: 262 ILTSNIGQQYILDSYKEVRALTAGNEKDKASSNGSSSSNGEEPGKSSFKGTGKSPKDILR 321 Query: 736 HMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHI 795 M++ VL V F+P+ I R+ E+++F PLGE + + ++L L L +G + + Sbjct: 322 RMRQKVLKEVFGYFKPQVIGRMSEIIIFEPLGETAMKGVLNLKLSALRNSLAAKGIDFKV 381 Query: 796 SDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPG 841 +D AL + E + +G R + + +++ I+ +A ++SG+L G Sbjct: 382 ADSALGYILERAWSHKFGGRRMAKYLEKYIKPRVAPLLISGKLKAG 427 >UniRef50_C2EIG8 ATP-dependent Clp protease n=4 Tax=Lactobacillales RepID=C2EIG8_9LACO Length = 636 Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 146/314 (46%), Positives = 212/314 (67%), Gaps = 15/314 (4%) Query: 531 VTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590 V++ EIAEVL R TGIPV+ ++ +E ++L +E L RV GQ AV VS+A+ SRAG Sbjct: 284 VSEVEIAEVLKRRTGIPVTTILRAEEDRLKNIESRLSKRVKGQEFAVKEVSDAVTISRAG 343 Query: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAP 650 L D +P+G+FLFLG TGVGKTEL K+LA +FD + AM+R+DMSEF + S +L+G Sbjct: 344 LQDETKPLGTFLFLGTTGVGKTELAKSLAEVVFDDENAMIRLDMSEFSQPGSSLKLIGT- 402 Query: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFR 710 + G LTEAV+ RPYS++L DE+EKA +V ++LLQ+LDDGRLTDG GR + F+ Sbjct: 403 -----RKTKGVLTEAVKHRPYSIVLFDELEKADREVHDLLLQILDDGRLTDGTGRLISFK 457 Query: 711 NTVVIMTSNLGSDLI---QERFGELDYAHMKELVLGVVSHN------FRPEFINRIDEVV 761 NT+VIMT+N+G+D I +E G+++ ++E + S + FRPEFINRID V Sbjct: 458 NTIVIMTTNIGADKIKLNEELKGDIENLSLREYNQFIESMDIELQTEFRPEFINRIDHKV 517 Query: 762 VFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAI 821 VF LGE+ I IA L+ L +R++++ ++ ++E L L+ NG D GARPL R I Sbjct: 518 VFKMLGEEVIREIAIKDLEILDQRMQKQKAKLVYNEELLDYLAFNGTDVNNGARPLMRLI 577 Query: 822 QQQIENPLAQQILS 835 +++ P+++++L+ Sbjct: 578 NRKVLAPISRKLLT 591 Score = 228 bits (582), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 118/240 (49%), Positives = 167/240 (69%), Gaps = 2/240 (0%) Query: 161 LKKYTIDLTERAEQGKLD-PVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGL 219 L +YT +L+ +A+ D V GR++EI I L R+TKN+P+LIGE GVGKTAIVEG+ Sbjct: 36 LDQYTTNLSIKAQSRPDDYEVYGREKEIEDIIISLMRKTKNSPLLIGEAGVGKTAIVEGV 95 Query: 220 AQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDE 279 A RII +VPE L+ V +L++ +L++ G F + K ++ +L +G +LFIDE Sbjct: 96 ALRIIRNQVPESLQDLTVRSLELSSLMSDT-VEGSFLAKFKAIIEELVATKGENLLFIDE 154 Query: 280 LHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVA 339 +HT++GAG A+DAGN+LKPALARGE+ +GATT+DEY + IE D AL+RRFQ + + Sbjct: 155 IHTLMGAGANGQALDAGNVLKPALARGEIQMIGATTIDEYHETIENDRALQRRFQNIQID 214 Query: 340 EPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAAS 399 EP+ E + IL+G+ +E H V+I + A+ AA LS RYI DR LPDKA+DL+DEA++ Sbjct: 215 EPTKEQALVILQGVTPSFENFHQVKIKESALKAAINLSVRYIPDRFLPDKALDLLDEAST 274 >UniRef50_A6G683 Probable ATP-dependent Clp protease n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G683_9DELT Length = 767 Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 140/325 (43%), Positives = 203/325 (62%), Gaps = 9/325 (2%) Query: 535 EIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADP 594 ++ V+AR IP + +R L + + L + GQ+EAV + AI+R+RAGLA P Sbjct: 419 QVETVIARMARIPPKSVSTDDRAVLKGLGEGLRQVLFGQDEAVATATKAIKRARAGLARP 478 Query: 595 NRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYV 654 ++PIG FLF GPTGVGKTEL + LA + +R DMSE+MEKHSVSRL+GAPPGYV Sbjct: 479 DKPIGCFLFTGPTGVGKTELARQLARLL---GMPFLRFDMSEYMEKHSVSRLIGAPPGYV 535 Query: 655 GYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVV 714 G+++GG LT++V + P+S++LLDE+EKAHPD+F++LLQV+D LTD G+ DFRN ++ Sbjct: 536 GFDQGGQLTDSVAKNPHSIVLLDEIEKAHPDIFSVLLQVMDSATLTDTTGKKTDFRNVIL 595 Query: 715 IMTSNLGSDLIQER---FGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHI 771 IMTSN G+ + +R FG D ++ + F PEF NR+D++V F L + I Sbjct: 596 IMTSNAGAFEMTQRKVGFGS-DDGNVDSAANKALERTFSPEFRNRLDKIVTFGQLPQPVI 654 Query: 772 ASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQ 831 +A L+ L +L ER + + A +S GYD +GARP+ R I + I+ L Sbjct: 655 EKVADKMLRELEIQLSERDVRLTWTPAARDWVSRKGYDKKFGARPMARVIDEAIKGALVD 714 Query: 832 QILSGELVPGKVIRLEVN--EDRIV 854 ++L G L G + ++ + ED +V Sbjct: 715 ELLFGRLEGGGSVEVDCDRAEDELV 739 Score = 268 bits (684), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 130/244 (53%), Positives = 179/244 (73%), Gaps = 3/244 (1%) Query: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220 L Y +DL RA G +DP++GR++E+ R IQVL RR KNNPVL+GEPGVGKTA+VEGLA Sbjct: 92 LTAYAVDLAARAASGDIDPLVGREQELTRLIQVLCRRRKNNPVLVGEPGVGKTAVVEGLA 151 Query: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280 + + +VPE + + ALDMG+L+AG K+RG+FEERLK V+ + +Q G ILFIDE+ Sbjct: 152 LAVHDQKVPEPIADAHIYALDMGSLLAGTKFRGQFEERLKAVVAAIEEQPG-AILFIDEI 210 Query: 281 HTMVGAG-KADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVA 339 HT++GAG + G+MDA NMLKPAL G + C+GATT EY+ + ++D AL RRFQK+ + Sbjct: 211 HTVIGAGATSGGSMDASNMLKPALNAGRVRCIGATTYKEYKNF-DRDPALARRFQKIEIV 269 Query: 340 EPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAAS 399 EP+ ++ I IL+GLK YE HH+V T AI + L+H+Y+ DR+LPD AID++DE + Sbjct: 270 EPTTDEAILILQGLKPAYEAHHNVSYTPDAIEESVRLAHKYLRDRRLPDSAIDVMDETGA 329 Query: 400 SIRM 403 + R+ Sbjct: 330 AARL 333 >UniRef50_B2S440 ATP-dependent Clp protease, subunit A n=2 Tax=Treponema pallidum RepID=B2S440_TREPS Length = 809 Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 140/325 (43%), Positives = 211/325 (64%), Gaps = 12/325 (3%) Query: 531 VTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590 + +++I E++A+ IP R+ SE EKL E+ + ++ GQ EA+D V+ ++R+R G Sbjct: 466 IGESDIDEIVAKIAKIPKQRVSASEIEKLRNFERSISEKIFGQGEAIDLVTRTLKRARVG 525 Query: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAP 650 L ++PI + LF+G TGVGKTEL + LA + + R DMSE+ EKH+VSRL+G+P Sbjct: 526 LRVKHKPIANLLFVGATGVGKTELARTLAQEL---GIVLHRFDMSEYQEKHTVSRLIGSP 582 Query: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFR 710 PGYVG+EEGG LT+AVR++P++V+LLDE+EKAHPD+FN+LLQV+D LTD QGR DFR Sbjct: 583 PGYVGFEEGGLLTDAVRKQPHAVLLLDEIEKAHPDIFNVLLQVMDYATLTDNQGRKADFR 642 Query: 711 NTVVIMTS-----NLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHP 765 N ++IMTS N+G LI G++ A + E V + F PEF NR+D V+ F Sbjct: 643 NVILIMTSNAGARNMGVSLIGFHKGQVGTAVIDEAVERI----FSPEFRNRLDAVIRFDA 698 Query: 766 LGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQI 825 L + + IA+ +L + ++L+++ I+D+AL LL+E + GAR + R ++Q++ Sbjct: 699 LSLETMERIARKELALVCEQLQKKHIRFDITDDALALLAERSHSGGSGARNVARLVEQEV 758 Query: 826 ENPLAQQILSGELVPGKVIRLEVNE 850 N LA +L G + G +R V + Sbjct: 759 ANVLADLMLFGGVAEGDALRCTVKD 783 Score = 258 bits (659), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 133/244 (54%), Positives = 179/244 (73%), Gaps = 2/244 (0%) Query: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220 L+KYT++LTERA +G+L P+IGR +EI RTIQ+L RR KNNPV +GE GVGKTAI EGLA Sbjct: 210 LEKYTVNLTERARRGELAPLIGRTQEIERTIQILCRRQKNNPVHVGEAGVGKTAITEGLA 269 Query: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280 QRI+ +VPE L+G + +LDM +L+AG K+RG+FEERLK + +L K+ ILFIDE+ Sbjct: 270 QRIVRCDVPEALEGVEIFSLDMTSLLAGTKFRGDFEERLKRLAEELEKKT-QAILFIDEI 328 Query: 281 HTMVGAGKADGA-MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVA 339 HT+VG G +DA N+LKP L+ G++ C+G+TT +EY ++ KD AL RRFQK+ + Sbjct: 329 HTVVGTGSGGSGGLDASNLLKPLLSSGKIRCIGSTTYEEYTKHFRKDQALARRFQKIDIE 388 Query: 340 EPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAAS 399 EPS E+T+ IL G++ YE H V +D A+ AA LS +YI R LPDKAID+IDEA + Sbjct: 389 EPSEEETLRILEGIRTLYEDFHAVHYSDEALAAAVRLSVQYIQGRHLPDKAIDIIDEAGA 448 Query: 400 SIRM 403 ++ Sbjct: 449 CAKL 452 >UniRef50_Q7YN63 Clp protease ATP-binding subunit n=5 Tax=Apicomplexa RepID=Q7YN63_EIMTE Length = 741 Score = 266 bits (681), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 129/310 (41%), Positives = 203/310 (65%), Gaps = 13/310 (4%) Query: 539 VLARWTGIPVSRMMESEREKLLRMEQELHHR--VIGQNEAVDAVSNAIRRSRAGLADPNR 596 ++++++ P + +++ ++ +L + V GQ+ A+ +S++++R+ GL + N+ Sbjct: 399 IISQYSKFPNTLLLKETNNTIIINNIDLKLKKYVYGQDIAITKISSSLKRAYTGLKEQNK 458 Query: 597 PIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGY 656 PIGS+L GP+G GKTEL K+LA +F S++ ++R DMSEFMEKHS+S+L+G+PPGYVG Sbjct: 459 PIGSWLLCGPSGTGKTELVKSLAYLLFGSEKELIRFDMSEFMEKHSISKLIGSPPGYVGC 518 Query: 657 EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 716 EEGG LTEAV+++PYSVIL DE+EKAH D+ NI+LQ+LD+G LTD +G +DF NT++I Sbjct: 519 EEGGLLTEAVKKKPYSVILFDEIEKAHKDINNIMLQLLDEGTLTDSKGEHIDFTNTLIIY 578 Query: 717 TSNLGSDLIQERF---------GELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLG 767 TSNLG +F E +Y + + V V F+PEF+NR+D ++VF PL Sbjct: 579 TSNLGCPTSSVQFKSFQNGEELSEKEYKFLSKNVDIAVKKFFKPEFLNRLDSIIVFKPLS 638 Query: 768 EQHIASIAQ--IQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQI 825 + +I I + ++ + ++ LL++ Y+P+YGARPLKR IQQ I Sbjct: 639 ILCLINIINKFIFNLNKNLQNNNILLQVELEEDIKILLAKLAYNPLYGARPLKRIIQQFI 698 Query: 826 ENPLAQQILS 835 E P+++ I++ Sbjct: 699 EKPISEIIIN 708 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 51/222 (22%), Positives = 100/222 (45%), Gaps = 18/222 (8%) Query: 175 GKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKG 234 K + +IGRD+EI+ I++L R+ N +L+G G+GK +IVE L I N Sbjct: 174 NKRNNLIGRDKEIKNIIEILXRKLNRNIILLGNIGIGKLSIVEKLVYLIPN--------- 224 Query: 235 RRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMD 294 + L L++ L++ + +K + N L K+ N+IL+ + H + + Sbjct: 225 KIFLELNITNLISQSNNIN----IIKNLFNFL-KKYNNIILYCKDFHLLFNNSNTTTDLT 279 Query: 295 -AGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGL 353 N++ L ++ + ++ + Y + ++ + L+ F K+ + E + I + Sbjct: 280 YIKNIIYELLFLNKIQIIATSSENYYDKILKNEEKLKFLFAKINILELNKNILFLI---M 336 Query: 354 KERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLID 395 K+ ++ I D + LS +YI D P ++D Sbjct: 337 KQYLIKNNINWINDNILEIIIDLSKKYIKDYAFPKIGFLILD 378 >UniRef50_D1AUG7 ATP-dependent clp protease ATP-binding subunit n=14 Tax=Rickettsiales RepID=D1AUG7_ANACI Length = 781 Score = 266 bits (681), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 130/247 (52%), Positives = 178/247 (72%), Gaps = 2/247 (0%) Query: 159 QALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEG 218 ++L+ Y ++L A+ GK+D VIGR E RTI+VL RR KNNP+ +G+ GVGKTAIVEG Sbjct: 192 ESLEAYCVNLNVLAKNGKIDYVIGRQYEQERTIEVLLRRRKNNPLYVGDSGVGKTAIVEG 251 Query: 219 LAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFID 278 LA RI+ G + LK + +LDMG+L+AG +YRG+FEER+K V+ + ++ N +LFID Sbjct: 252 LALRIVEGNIVPQLKCVEIYSLDMGSLLAGTRYRGDFEERIKAVIRAIENKK-NAVLFID 310 Query: 279 ELHTMVGAGKADGA-MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVF 337 E+HT++GAG G+ +DA N+LKPALARG + C+GATT EY EKD AL RR+QK+ Sbjct: 311 EIHTIIGAGSTSGSPLDASNLLKPALARGSIRCIGATTYKEYNSNFEKDRALARRYQKIN 370 Query: 338 VAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEA 397 V E +VE+TI IL G+K YE++H V T A+ AA LS RYIA+R LPDKA+D++DEA Sbjct: 371 VEESTVEETIQILSGIKSYYEIYHDVHYTSQAVKYAAELSDRYIAERMLPDKAVDVLDEA 430 Query: 398 ASSIRMQ 404 +++ Sbjct: 431 GVYAKLR 437 Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 131/326 (40%), Positives = 195/326 (59%), Gaps = 13/326 (3%) Query: 531 VTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590 VT +I +++R T IP + S+ K+ +E+ L + GQ+ A+ + +AIR ++AG Sbjct: 445 VTGRDIESIISRITEIPCDNLFASDTHKVKNLEENLKQVIFGQDAAISQIVDAIRIAKAG 504 Query: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAP 650 L +P+ S+L GPTGVGKTEL K LA M +VR DMSE+ME H+V+R++G+P Sbjct: 505 LRSHQKPLASYLLAGPTGVGKTELVKQLAKNM---GMKLVRFDMSEYMESHTVARMIGSP 561 Query: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFR 710 PGYVGYE+GG LT+ + R YSV+LLDE+EKAH V+NILLQ++D G +TD GR V FR Sbjct: 562 PGYVGYEQGGLLTDTIARNQYSVLLLDEIEKAHSSVYNILLQIMDYGCITDTYGRKVSFR 621 Query: 711 NTVVIMTSNLGS-DLIQERFGELDYAHMKELVLG----VVSHNFRPEFINRIDEVVVFHP 765 N V+++T+N G+ + Q G + + +G + F PEF NR+D VV F Sbjct: 622 NVVIVLTTNAGAVEFSQNAVG---FDRDRTFHIGSERKAIEKIFGPEFCNRLDAVVSFSY 678 Query: 766 LGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQI 825 L + + + L +L +G +I I +++ L++ G YGAR + I Q+I Sbjct: 679 LSADVMEKVVGKFIAELRDQLSRKGVDISIDKASVEFLTKMGQQDGYGARKAQSVIAQKI 738 Query: 826 ENPLAQQILSGELVPGKVIRLEVNED 851 + LA ++L G+L G R+EV D Sbjct: 739 KKHLALEMLFGKLAYGG--RVEVRFD 762 >UniRef50_C8PIY8 ATP-dependent CLP protease ATP-binding subunit n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PIY8_9PROT Length = 793 Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 128/254 (50%), Positives = 183/254 (72%), Gaps = 3/254 (1%) Query: 164 YTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRI 223 YT +L + A +GK+DP+IGR++EI +T+Q L RR KNNP+L+GE GVGKTAI+EG+A +I Sbjct: 206 YTANLNKIALEGKIDPLIGREKEIEKTLQTLCRRKKNNPILVGEAGVGKTAIIEGIALKI 265 Query: 224 INGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTM 283 + GEVPE LK + + ALD GAL+AG RGEFEERLK ++++ + + N ILFIDE+HT+ Sbjct: 266 VRGEVPEKLKNKVIYALDAGALIAGTTLRGEFEERLKDLIDEFSANQ-NAILFIDEIHTI 324 Query: 284 VGAGKAD-GAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPS 342 VGAG + +D N+LKP+LA GEL +GATT EYR + +D AL RRF K+ V+EPS Sbjct: 325 VGAGTGNRNELDMSNILKPSLASGELSVIGATTYGEYRSF-SQDKALSRRFCKIDVSEPS 383 Query: 343 VEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIR 402 ++D++ IL+G+ ++YE H V+ +D + + TL+ +Y +D+ LPD AIDLIDE +S Sbjct: 384 IDDSVEILKGVAKKYEEFHGVKFSDEILRDSVTLAKKYQSDKFLPDSAIDLIDEVGASFA 443 Query: 403 MQIDSKPEELDRLD 416 + P E+ + D Sbjct: 444 FKPHEAPLEISKDD 457 Score = 228 bits (582), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 124/295 (42%), Positives = 178/295 (60%), Gaps = 8/295 (2%) Query: 556 REKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELC 615 ++ L +E + + GQ+EAV ++ A+ RS AGL + PIG FLF G +GVGK+EL Sbjct: 478 KQVLKNLEANIKREIFGQDEAVSSLCKALLRSYAGLGGASSPIGVFLFAGSSGVGKSELA 537 Query: 616 KALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVIL 675 K LA + E R DMSE+ME HSVSRL+GAPPGYVG+E GG LT +++ PYSVIL Sbjct: 538 KVLAAQLGVHFE---RYDMSEYMEAHSVSRLIGAPPGYVGFENGGILTNNIKKHPYSVIL 594 Query: 676 LDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYA 735 DEVEKAHP + NI L + D+ LTD G T DF+NT++IM+SNLG+ + D + Sbjct: 595 FDEVEKAHPSMTNIFLGIFDNASLTDNNGVTTDFKNTIIIMSSNLGTKEAPQVGFTKDES 654 Query: 736 HMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHI 795 + V + F PEF NRID+++ F+ L + + I + L +L + +I + Sbjct: 655 YK---VDSAIKSFFAPEFRNRIDKIINFNRLSGEILEKIVDKTIGELESQL--KNVKISL 709 Query: 796 SDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNE 850 + EA L+ GY +GAR LKR I QI + ++ ++L G L G ++ + V + Sbjct: 710 NKEAKDLIISRGYSDEFGARNLKREISSQISDHISGELLFGALQEGGLVSVSVKD 764 >UniRef50_UPI0001973947 ATP-dependent Clp protease, ATP-binding subunit ClpA n=3 Tax=Clostridiales RepID=UPI0001973947 Length = 801 Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 147/323 (45%), Positives = 207/323 (64%), Gaps = 7/323 (2%) Query: 536 IAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPN 595 I E+L++ IP + E +KL +E+ L V GQ+EA+ V NAI+ SRAGL++ Sbjct: 467 IDEILSKTCRIPKKVVESGEIKKLAGLERRLSACVFGQDEAIKEVVNAIKFSRAGLSEAG 526 Query: 596 RPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVG 655 +P+ SFLF+GPTGVGKTE+ ++LA+ + ++R DMSE+ EKH+V++L+GAP GYVG Sbjct: 527 KPLASFLFVGPTGVGKTEIARSLAS---ELGIRLIRFDMSEYEEKHAVAKLIGAPAGYVG 583 Query: 656 YEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVI 715 YEEGG LTEAVR+ P++V+LLDE+EKAH D++NILLQV+D LTD QGR DFRN V+I Sbjct: 584 YEEGGLLTEAVRKNPHAVLLLDEIEKAHSDIYNILLQVMDYATLTDNQGRKADFRNIVLI 643 Query: 716 MTSNLG-SDLIQERF---GELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHI 771 MTSN G S L + R +++ V+ F+PEF NR+ +VVF + E+ Sbjct: 644 MTSNAGASRLTKARLGFGDGAGADGRGSVIMDEVNRVFQPEFRNRLSRIVVFDGIDERTA 703 Query: 772 ASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQ 831 IA +L+ L L ER E + +A LL++ G YGAR L R I+++I+ LA Sbjct: 704 REIAGKKLRELGALLSERQVEFSFTRQAEALLTKKGVSREYGARELTRVIEREIKPLLAD 763 Query: 832 QILSGELVPGKVIRLEVNEDRIV 854 ++L G L G RL+V + V Sbjct: 764 RLLFGSLKRGGFCRLDVKDGAFV 786 Score = 242 bits (618), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 129/278 (46%), Positives = 183/278 (65%), Gaps = 17/278 (6%) Query: 141 EQMRGG----ESVNDQGAED---------QRQALKKYTIDLTERAEQGKLDPVIGRDEEI 187 E MRGG E ND G E+ +R+ + Y L + + P+IGR++E+ Sbjct: 179 ELMRGGGKRTEGKNDDGGEEDIPFGSTEKKREKWRDYVTCLNDSLSD--VSPLIGREDEL 236 Query: 188 RRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVA 247 RT+Q+L RR KNNP+ IGEPGVGKTAI GLA+ + +VPE LKG R+ +LD+GA++A Sbjct: 237 ERTMQILCRREKNNPLHIGEPGVGKTAIAYGLARLLEEEKVPEALKGARIYSLDLGAMIA 296 Query: 248 GAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGK-ADGAMDAGNMLKPALARG 306 G +YRGEFE+RLK VL L ++E I+++DE+H +VGAG +G+ DA N+LKP LA G Sbjct: 297 GTQYRGEFEKRLKSVLAGLEREE-KPIVYLDEIHNIVGAGAVGEGSFDASNLLKPYLAAG 355 Query: 307 ELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQIT 366 + +GATT +EY+++ EK +L RRFQ + ++EP E+T+ IL GL++ YE +H V Sbjct: 356 RIRFIGATTHEEYKKHFEKSKSLVRRFQNIEISEPGEEETVKILEGLRKHYEKYHGVSYK 415 Query: 367 DPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQ 404 + A +S RYI +R LPDKAIDLIDEA + ++ Sbjct: 416 KGVMEYAVHMSARYINERFLPDKAIDLIDEAGAYRKLH 453 >UniRef50_A6KY28 ATP-dependent Clp protease, ATP-binding subunit ClpA n=11 Tax=Bacteroides RepID=A6KY28_BACV8 Length = 742 Score = 262 bits (669), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 174/462 (37%), Positives = 258/462 (55%), Gaps = 31/462 (6%) Query: 7 TNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQ 66 T+ A A AQS A+ + ++FI P HL+SALL Q L +L I++ Sbjct: 6 TDSVNYAFASAQSQAMQYRHEFITPEHLLSALLEQV--PFQKALAECFCTPEELSQSISE 63 Query: 67 ALN----RLPQ-VEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGT 121 L+ R+PQ +E +++ S L +L + V L+ + Sbjct: 64 YLSKKVERVPQEIEY---ELEISGQLSELLQYAYMTISHSSAEEMDVPHLVQGMLQLEDS 120 Query: 122 LADIL--KAAGATTAN-ITQAIEQMRGGESVNDQGAEDQRQA--LKKYTIDLTERAEQGK 176 A L + G ++ I ++ + +Q ++ + Y L E + Sbjct: 121 WAGYLLKETVGEDMPEFLSSLISNYEHMNQFQEETSSEQEKSEPWRNYVTCLNEGLQD-- 178 Query: 177 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRR 236 +P+IGR+ E+ RTIQVL R+ KNNP+ +GEPGVGKTA+V GLA RI G VPE L G R Sbjct: 179 RNPLIGRNVELERTIQVLCRKEKNNPLHVGEPGVGKTALVYGLAARIEAGNVPERLTGCR 238 Query: 237 VLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGK-ADGAMDA 295 + LD+G L+AG +YRGEFE+RLK ++ + ++EG+ I++IDE+H ++GAG+ DG+MDA Sbjct: 239 IYELDLGNLLAGTQYRGEFEKRLKAIMEGI-RKEGHAIVYIDEIHNLIGAGRTGDGSMDA 297 Query: 296 GNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKE 355 NMLKP L GE+ +G+TT +E+ +Y + L RRFQ++ + EP +E+TI I+ GLKE Sbjct: 298 SNMLKPYLEGGEIRFIGSTTYEEFNRYFSRSRGLVRRFQQIDIQEPGIEETIHIVEGLKE 357 Query: 356 RYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRL 415 RYE H V + I A T + RYI+DR LPDKAIDL+DEA + +I E + Sbjct: 358 RYETFHGVVYEEGVIAYAVTAAARYISDRFLPDKAIDLVDEAGA--YREIHPTDTETQTV 415 Query: 416 DRRIIQ------LKLEQQALMKESDEASKKRLDMLNEELSDK 451 D+ +I K++ A MKE D A+ L+ L+E +S K Sbjct: 416 DKALITDILARICKVDVLA-MKEEDNAT---LETLHERISAK 453 Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 136/317 (42%), Positives = 194/317 (61%), Gaps = 4/317 (1%) Query: 531 VTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590 V A I ++LAR + V M E + L + + + ++ GQ EAV V A++ ++AG Sbjct: 415 VDKALITDILARICKVDVLAMKEEDNATLETLHERISAKIYGQEEAVCQVVEAVQMAKAG 474 Query: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAP 650 L D N+P+ S LF+GPTGVGKTE+ K LA+ + A+ R DMSE+ EKH+V++L+G+P Sbjct: 475 LLDENKPLASLLFVGPTGVGKTEVAKVLAS---ELGIALQRFDMSEYTEKHTVAKLIGSP 531 Query: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFR 710 GY+GYE+GG LT+A+R+ P V+LLDE+EKAHPD+FNILLQV+D LTD +GR D R Sbjct: 532 AGYIGYEDGGLLTDAIRKTPNCVLLLDEIEKAHPDIFNILLQVMDYAVLTDNKGRKADCR 591 Query: 711 NTVVIMTSNLGSDLI-QERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQ 769 + ++IMTSN G+ Q G E +L V F+PEFINR+ VVFH + Sbjct: 592 HVILIMTSNAGAQFAHQASIGFSGQITAGEAMLKQVKKTFKPEFINRLSATVVFHDMDYG 651 Query: 770 HIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPL 829 + I +L L +L R + +S EA K L + G+ YGAR + R I Q++ L Sbjct: 652 MASLILNKKLNELKNKLSARHVGMELSPEAYKHLLKLGFTKEYGAREMDRVITSQLKPLL 711 Query: 830 AQQILSGELVPGKVIRL 846 ++IL G L G +R+ Sbjct: 712 MREILFGTLKTGGKVRV 728 >UniRef50_UPI00016B2080 clp protease ATP binding subunit n=4 Tax=candidate division TM7 RepID=UPI00016B2080 Length = 799 Score = 259 bits (663), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 133/299 (44%), Positives = 196/299 (65%), Gaps = 14/299 (4%) Query: 555 EREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTEL 614 +RE LL +E +H R+I Q AV AVS+A+RR+RAG+ + NRPIG+FLFLGPTGVGKTEL Sbjct: 497 DREMLLNLEDRIHKRMINQTHAVKAVSDALRRARAGVRNQNRPIGTFLFLGPTGVGKTEL 556 Query: 615 CKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVI 674 KALA F ++ +VR+D++E++ VSRL+ + LT + ++P+SV+ Sbjct: 557 AKALAEVYFGGEDNIVRLDLNEYVGLEDVSRLIADAS-----SDPNSLTAKILKQPFSVV 611 Query: 675 LLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE------R 728 LLDE+EKAHP+V LLQ+LD+G L D R V FR+ +VI TSN G+D I+E + Sbjct: 612 LLDEIEKAHPNVLTTLLQLLDEGILRDINNREVSFRDAIVIATSNAGADRIREYIERGYK 671 Query: 729 FGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEE 788 + + + EL + F+PEF+NR DE+ VF PLG++ + + I L + K L + Sbjct: 672 VEQFESQIVNEL---IKLQQFKPEFLNRFDEITVFSPLGKRELLQVVDIMLTGINKTLAQ 728 Query: 789 RGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLE 847 + ++ + D+A LL ENGYDP GARP++R IQ+ +EN +A+++LSG + PG +I + Sbjct: 729 QKVQVKVDDDAKILLVENGYDPQLGARPMRRIIQKTVENTVAKEMLSGLVSPGGIIEIH 787 Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 68/221 (30%), Positives = 109/221 (49%), Gaps = 6/221 (2%) Query: 182 GRDEEI-RRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIING--EVPEGLKGRRVL 238 GR +EI + I + N L+G GVGKTAI+ A R+++ ++P LK R+V Sbjct: 247 GRHQEIINQLINNFGTGGRQNAALVGPTGVGKTAILHSFASRLLDAAADIPNNLKFRQVF 306 Query: 239 ALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNM 298 LD AL++ A RGE E + VL + A N+I+ +D G G++D N+ Sbjct: 307 LLDSSALISAAPGRGELEGLVMRVLGE-AFTAKNIIICLDNAQLFFEEGV--GSIDISNV 363 Query: 299 LKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYE 358 L P L G L + ++ Q ++ +L ++ V EP +DTI ++ E Sbjct: 364 LLPILEAGNLRVILTMDDQQFLQISHRNPSLSNALNRIVVGEPEKKDTITAMQDQILTIE 423 Query: 359 LHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAAS 399 V +++ A LS RYI D +P +A+ L++ AA+ Sbjct: 424 YKRKVIYMYQSLIEAYRLSERYIHDLAMPGRAVKLLESAAN 464 >UniRef50_A6G5U6 AAA ATPase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G5U6_9DELT Length = 742 Score = 259 bits (662), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 149/380 (39%), Positives = 233/380 (61%), Gaps = 7/380 (1%) Query: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 536 A LEQ + ++ + +L R++E + + L+ +T R R V Sbjct: 357 AVLEQHGLGLDNDAHLHELTRIAERFLTGLAMPGRALDLLDLSCARTTREGRASVGRDTW 416 Query: 537 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNR 596 ++ TG+P SR+ S LL ++ L +V+G ++A+++ +RR+RAG + R Sbjct: 417 LTIVCERTGLPRSRVEGSSERDLLDLDAVLARQVVGHEHVLEALASLVRRNRAGFSS-GR 475 Query: 597 PIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGY 656 PI S L LGP+GVGKTE+ KALA+ +++ D+A++R+DMSE+ E H+V+R+VGAPPGYVG+ Sbjct: 476 PIASVLLLGPSGVGKTEIAKALASALYERDDALLRLDMSEYAEAHAVARVVGAPPGYVGH 535 Query: 657 EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 716 E+GG LT+ + R P+ V+LLDE+EK+H DV +LLQV D+GRLTDG+GRT+DFR+ VVIM Sbjct: 536 EQGGALTDPLLRNPHRVVLLDEIEKSHRDVHQLLLQVFDEGRLTDGRGRTIDFRHAVVIM 595 Query: 717 TSNLGSDLIQE----RFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIA 772 TSNLG++L+ + G+ D VL +F E NRI+ +V PL + + Sbjct: 596 TSNLGAELMFDLDLGPNGDGDALPDDAEVLDRARSHFPVELWNRIEAPLVLRPLTREQML 655 Query: 773 SIAQIQLKRLYKRL-EERGYEIHISDEAL-KLLSENGYDPVYGARPLKRAIQQQIENPLA 830 +I++ + KRL +RG + DE L +L+ G DP GARPL+ I +++E+ +A Sbjct: 656 AISRRLIASSSKRLTRDRGIRYRVEDEVLERLIERAGIDPALGARPLRHLIGREVESLVA 715 Query: 831 QQILSGELVPGKVIRLEVNE 850 +IL G + G+ + + +E Sbjct: 716 DEILRGRVRAGEEVVVRFDE 735 >UniRef50_Q9MTD7 Clp n=136 Tax=Apicomplexa RepID=Q9MTD7_TOXGO Length = 765 Score = 259 bits (662), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 126/325 (38%), Positives = 198/325 (60%), Gaps = 14/325 (4%) Query: 528 RNKVTDAEIAEVLARWTGIPVSRMMESEREK---LLRMEQELHHRVIGQNEAVDAVSNAI 584 NK+ ++I + L + + + + + ++ + + L + GQ A+ + ++ Sbjct: 406 NNKLALSDIQKTLTKLINLSTNLLFNKANKTNFDIIALRKNLQKSLFGQPTAISKILISL 465 Query: 585 RRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVS 644 +R GL N+PIGS+L GP+G GKTEL K LA F+F S+ ++R DMSEFMEKHS+S Sbjct: 466 KRVFTGLKQINKPIGSWLLCGPSGTGKTELAKLLAKFLFGSEADLIRFDMSEFMEKHSLS 525 Query: 645 RLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQG 704 +L+GAPPGYVGY + G LTEA+ ++P++V+L DE+EKAH D+ N++LQ+LDDG+LTD G Sbjct: 526 KLIGAPPGYVGYGKSGLLTEAIAKKPFTVLLFDEIEKAHKDINNLMLQLLDDGKLTDSLG 585 Query: 705 RTVDFRNTVVIMTSNLG----SDLIQ-----ERFGELDYAHMKELVLGVVSHNFRPEFIN 755 + VDF NT++ TSNLG S +Q + + +Y + V + F+PEF+N Sbjct: 586 KCVDFSNTLIFFTSNLGFPTNSYELQFLKSGTKLSKKNYKILSNKVESAIQSYFKPEFLN 645 Query: 756 RIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHIS-DEALK-LLSENGYDPVYG 813 R+D++++F PL I LK +Y +L I + D +K LL++ Y P+YG Sbjct: 646 RLDDIIIFKPLNINFFKYIINKFLKNIYLKLYNNQIPIFLDIDSNIKTLLAKLAYHPLYG 705 Query: 814 ARPLKRAIQQQIENPLAQQILSGEL 838 ARPLKR ++ IE P++ +++ Sbjct: 706 ARPLKRLLELIIEKPISDLLINFSF 730 >UniRef50_A7H2P9 ATP-dependent Clp protease, ATP-binding subunit ClpA n=16 Tax=Campylobacter RepID=A7H2P9_CAMJD Length = 709 Score = 257 bits (657), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 123/251 (49%), Positives = 172/251 (68%), Gaps = 2/251 (0%) Query: 159 QALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEG 218 Q L +T DLT A+ GK+DP+IGR E+ R +Q+L RR KNNP+L+GE GVGKTAIVEG Sbjct: 139 QNLSNHTSDLTLLAQNGKIDPLIGRKFELERMMQILSRRKKNNPILVGEAGVGKTAIVEG 198 Query: 219 LAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFID 278 LA I +VP+ L+ ++ +LDM +++AG KYRG+FE+R+K +LN+L K N ILFID Sbjct: 199 LALAIAEKKVPKNLQNAKIFSLDMASILAGTKYRGDFEKRIKEILNELEKIP-NAILFID 257 Query: 279 ELHTMVGAGKA-DGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVF 337 E+HT+VGAG + D N+LKPAL+ G L C+GATT EY+ +K+ L RRF K+ Sbjct: 258 EIHTIVGAGSTGESHTDFSNLLKPALSNGTLKCIGATTFMEYKNTFDKNKPLSRRFAKIN 317 Query: 338 VAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEA 397 V EPS E+++ IL+GLK +YE HH+++ D + A ++ D+ LPD AIDL+DE Sbjct: 318 VDEPSQEESLQILKGLKNKYEEFHHIKLNDEILQYAVIWGKKFFNDKFLPDCAIDLVDEL 377 Query: 398 ASSIRMQIDSK 408 +S + +K Sbjct: 378 GASFALNPKAK 388 Score = 244 bits (622), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 124/319 (38%), Positives = 205/319 (64%), Gaps = 13/319 (4%) Query: 535 EIAEVLARWTGIPVSRMMESEREK-LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLAD 593 ++ VLA+ T +M E ++ K L+ ++ L ++ GQ+E +D++ +++++S AG + Sbjct: 395 DLKNVLAKMT--HHHKMFEFDQNKALMNLKTNLKAKIFGQDEVIDSLVSSLKQSFAGFKN 452 Query: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGY 653 N P G FLF G +GVGKTELCKALA F+ + R DMSE+ EKH++S+L+G+P GY Sbjct: 453 SNTPRGVFLFTGSSGVGKTELCKALAEFL---GLNLERFDMSEYAEKHAISKLIGSPAGY 509 Query: 654 VGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTV 713 +G+EEGG L+ A+R+ P+S++L DE+EKAHPD+ N LQ+ D+ LTD G VDF+NT+ Sbjct: 510 IGFEEGGLLSNAIRKNPFSLVLFDEIEKAHPDLSNTFLQIFDNAELTDNSGLKVDFKNTI 569 Query: 714 VIMTSNLGSDLIQERFGELDY-AHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIA 772 +IMTSNLG ++E EL + + +E + F PEFINRID+++ F+ L + + Sbjct: 570 IIMTSNLG---LKES-NELGFLSKNEEKSNRAIKDFFAPEFINRIDKILHFNDLNDAILV 625 Query: 773 SIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQ 832 I + +L + K L ++ + D+A L++ Y+ +G R LKR I ++I ++ + Sbjct: 626 KIIEKELDEISKNL--NNIKLSVDDKAKIYLAKKAYNKEFGVRLLKRIISEEIGEKISDE 683 Query: 833 ILSGELVPGKVIRLEVNED 851 IL G+L G + ++++ ++ Sbjct: 684 ILFGKLKKGGIAKIKLGKN 702 >UniRef50_C3XFH5 ATP-dependent Clp protease ClpB n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XFH5_9HELI Length = 763 Score = 256 bits (655), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 135/297 (45%), Positives = 191/297 (64%), Gaps = 4/297 (1%) Query: 109 ELFVLAALESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDL 168 + FV E A +LKA G ++ + + E V+ + +D + L+KY +L Sbjct: 109 DFFVALMQEEDCYCARLLKAQGIQIEDVMRIVVDF--DEHVSREKTKDSQSQLEKYAKNL 166 Query: 169 TERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEV 228 + A +GK+DP+IGRD EI + QVL RR KNNP+LIGE GVGK+AIVEGLA RI+ V Sbjct: 167 NQLAIEGKIDPLIGRDLEINQIAQVLCRRKKNNPMLIGEAGVGKSAIVEGLALRIVERSV 226 Query: 229 PEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGK 288 P L + A+D+ ++VAG KYRGEFE R+K +L ++ K + N+I+F DE+H +VGAG+ Sbjct: 227 PAKLLNNVIYAVDVSSVVAGTKYRGEFETRIKKILAEVEKDK-NIIIFFDEIHMIVGAGQ 285 Query: 289 AD-GAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTI 347 ++ G MD N+LKP LA G L C+GATT +Y+ +KD AL RRF ++ V EPS E+ + Sbjct: 286 SNSGGMDFSNLLKPMLASGRLRCIGATTSHDYKNSFDKDKALARRFTQIKVEEPSEEECL 345 Query: 348 AILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQ 404 IL + YE H+V + AI A +LS +YI +R LPDKAIDL+DEA + ++ Sbjct: 346 LILEKIAPLYEKFHNVTYENEAIKACVSLSSKYITERHLPDKAIDLMDEAGAKAQLN 402 Score = 251 bits (642), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 133/324 (41%), Positives = 195/324 (60%), Gaps = 6/324 (1%) Query: 531 VTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590 +T I ++A T IP S + E L +E +L R+ Q++A++ + I+ ++AG Sbjct: 435 ITKEHIESLMASITNIPKSTINADESMLLKNLESKLKKRIFSQDKAIEKIVEKIKINKAG 494 Query: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAP 650 L + +RPI SFLF GP+GVGKTEL K LA + E RIDMSE+ E HS+S+L+G+P Sbjct: 495 LGELHRPIASFLFTGPSGVGKTELSKELAKILGIKFE---RIDMSEYAESHSISKLIGSP 551 Query: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFR 710 GYVGYEEGG L +R P+ V+LLDE+EKAH DV+NILLQ++D LTD Q DF+ Sbjct: 552 AGYVGYEEGGLLINKIRINPHCVLLLDEIEKAHSDVYNILLQIMDSATLTDNQNNKADFK 611 Query: 711 NTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQH 770 N ++IMTSN GS G LD + + V + F PEF +R+D ++ F PLG Sbjct: 612 NVILIMTSNAGSKE-GNSVGFLDTSEHR--VGMAIKDTFSPEFRSRLDAIIPFMPLGVNE 668 Query: 771 IASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLA 830 + IAQ + L + L+E+ +++S +A + +++ D GAR +K+ I I+ PL+ Sbjct: 669 LQKIAQKYITDLNETLKEKHITLNLSTKAAQFIAQQSIDKALGAREIKKTIDSAIKLPLS 728 Query: 831 QQILSGELVPGKVIRLEVNEDRIV 854 +L GEL G V + V + +V Sbjct: 729 NAMLFGELRKGGVAHINVKNNTLV 752 >UniRef50_B5RQH1 ATP-dependent Clp protease, subunit C n=24 Tax=Borrelia RepID=B5RQH1_BORRA Length = 744 Score = 256 bits (653), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 121/273 (44%), Positives = 185/273 (67%), Gaps = 4/273 (1%) Query: 135 NITQAIEQMRGGESVN---DQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTI 191 NI +I+++R E+ D+ ++ + KY +LT A++ KLDP+IGR++EI+ I Sbjct: 129 NIITSIDKIRLIETYKEFEDETRQNDYFEINKYVKNLTTLAKEKKLDPLIGREKEIQSLI 188 Query: 192 QVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKY 251 +L+RR KN+ +LIGEPG+GKTAIVEGLA +I N E+ L+ + +L ++ LV+G KY Sbjct: 189 SILERRNKNSTILIGEPGIGKTAIVEGLAIKIANKEIKSQLQNKIILQIETSDLVSGTKY 248 Query: 252 RGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCV 311 RGEFEERL ++ + K N+I+FIDE+HT++GAG ++G++DA N+LKP L+R + + Sbjct: 249 RGEFEERLNNIIKSI-KNNKNIIIFIDEIHTLIGAGNSEGSIDAANILKPILSRSAIQII 307 Query: 312 GATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIV 371 GATT DEYR++I KD A RRFQ + + EP ++T+ I+ + + +E +H V AI Sbjct: 308 GATTYDEYRKHISKDKAFTRRFQTISIKEPDEKETLNIINSIIKNFENYHGVTYEKEAIE 367 Query: 372 AAATLSHRYIADRQLPDKAIDLIDEAASSIRMQ 404 +LS +Y+ +R+ PDKAIDLID A + + Q Sbjct: 368 NVISLSSQYLTNRKFPDKAIDLIDIAGAQKKQQ 400 Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 86/333 (25%), Positives = 173/333 (51%), Gaps = 6/333 (1%) Query: 527 LRNKVTDAE-IAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIR 585 + K+ +AE + + GI V + E L + ++IGQ A+D + + Sbjct: 402 INTKIVNAEDVKNTTDEFFGIKVKLSLTEEIAYLKEETINIKEKIIGQESAIDEIIIEMV 461 Query: 586 RSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSR 645 +++ G+ + +P+ S L +G +G GKT L K ++ M +++++DMS++ E+ S+S+ Sbjct: 462 KTKLGINNNIQPLTSILLIGSSGSGKTILSKTISKIMIKDQNSILQLDMSDYREETSISK 521 Query: 646 LVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGR 705 L+G PGY GY +GG L ++ P + I+ + +E AH V +I+ Q+L++G L D Sbjct: 522 LIGTNPGYAGYTDGGILINRLKYNPRAFIIFENIEYAHNSVMSIIEQILENGELIDNTED 581 Query: 706 TVDFRNTVVIMTSNLGSDLIQER----FGELD-YAHMKELVLGVVSHNFRPEFINRIDEV 760 + F+N+++++++++GS ++ + F + D +K + + F+ I++I + Sbjct: 582 KISFKNSIIVLSTSIGSKILLGKGILGFNKTDNNIDIKSTINNELKTKFKLSLIDKIQKK 641 Query: 761 VVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRA 820 ++ + L E+ ++ I K L ++ + +I I D + + YD GAR + A Sbjct: 642 IILNVLTEKDLSIIYDNYCKELTQKFSLKNIQIEIDDSLKNHIIKKYYDKNSGARSILNA 701 Query: 821 IQQQIENPLAQQILSGELVPGKVIRLEVNEDRI 853 +++ IE + QI + I LE N +I Sbjct: 702 VKENIEEKIINQIFHNPNINLIKIYLEQNNIKI 734 >UniRef50_Q25823 Clp (C?) protein n=14 Tax=Haemosporida RepID=Q25823_PLAF7 Length = 766 Score = 255 bits (652), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 125/319 (39%), Positives = 205/319 (64%), Gaps = 16/319 (5%) Query: 531 VTDAEIAEVLARWTGIPVSRMMESERE---KLLRMEQELHHRVIGQNEAVDAVSNAIRRS 587 +T +I ++ + I + + + + L ++E L++ + GQN + + I+++ Sbjct: 420 LTIEDIKNSISNYLNISKTILFKDNKLTKLNLTKLENYLYNHIYGQNHIFNKIIPFIKQN 479 Query: 588 RAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLV 647 GL + N+PIGS++ GP+G GKTEL K L+ +F S++ ++R DMSE+MEKHS+SRL+ Sbjct: 480 FIGLKNKNKPIGSWILCGPSGTGKTELAKILSKQLFGSEKELIRFDMSEYMEKHSISRLI 539 Query: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTV 707 G+PPGYVGY EGG LTE V ++P SVIL DE+EKAHPD++NI+LQ+LD+GRLTD G+ + Sbjct: 540 GSPPGYVGYSEGGQLTEQVYKKPNSVILFDEIEKAHPDIYNIMLQILDEGRLTDSTGKLI 599 Query: 708 DFRNTVVIMTSNLGS----DLIQERFGELDYAHMKELVLGV---VSHNFRPEFINRIDEV 760 DF +T++++TSNLG DL + L + +KE+ + +++ F+PE +NR+ + Sbjct: 600 DFTHTIILLTSNLGCPKNYDLYLKNKNFLSKSDLKEIEKNIKININNYFKPELLNRLTNI 659 Query: 761 VVFHPLGEQHIASIAQI---QLK-RLYKRLEERGYEIHISDEALKLLSENGYDPVYGARP 816 ++F+PL ++ I +LK +LY L + IHI+ E L + Y+P+YGARP Sbjct: 660 LIFNPLNINNLLFIFNKFINELKIKLY--LNKLNIIIHINKELKYFLVKLMYNPLYGARP 717 Query: 817 LKRAIQQQIENPLAQQILS 835 LKR ++ + ++ +L+ Sbjct: 718 LKRILELIFDKSISDLLLT 736 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q7VQF3 Chaperone protein clpB n=10 Tax=Proteobacteria R... 940 0.0 UniRef50_A1A3G2 Chaperone clpB n=4 Tax=Bacteria RepID=A1A3G2_BIFAA 920 0.0 UniRef50_D2NR34 ATPase with chaperone activity, ATP-binding subu... 919 0.0 UniRef50_Q6NF05 Chaperone protein clpB n=18 Tax=cellular organis... 918 0.0 UniRef50_Q9RVI3 Chaperone protein clpB n=9 Tax=Bacteria RepID=CL... 917 0.0 UniRef50_C4FCQ4 Putative uncharacterized protein n=1 Tax=Bifidob... 917 0.0 UniRef50_P74459 Chaperone protein clpB 1 n=479 Tax=cellular orga... 912 0.0 UniRef50_P42730 Heat shock protein 101 n=34 Tax=Eukaryota RepID=... 905 0.0 UniRef50_Q73IE4 Chaperone protein clpB n=14 Tax=Rickettsiales Re... 904 0.0 UniRef50_Q3L1D0 Heat shock protein 101 n=6 Tax=Eukaryota RepID=Q... 899 0.0 UniRef50_Q7UM33 Chaperone protein clpB n=21 Tax=Bacteria RepID=C... 891 0.0 UniRef50_Q6GIB2 Chaperone protein clpB n=1154 Tax=cellular organ... 880 0.0 UniRef50_C3XMZ6 ATP-dependent protease ATP-binding subunit n=4 T... 873 0.0 UniRef50_Q7AJA9 Chaperone protein clpB n=4 Tax=Chlamydiales RepI... 872 0.0 UniRef50_C0GVK9 ATPase AAA-2 domain protein n=1 Tax=Desulfonatro... 869 0.0 UniRef50_Q4FXS7 Serine peptidase, putative n=12 Tax=cellular org... 860 0.0 UniRef50_C9RKR5 ATPase AAA-2 domain protein n=1 Tax=Fibrobacter ... 858 0.0 UniRef50_Q10YU4 ATPase AAA-2 n=7 Tax=Bacteria RepID=Q10YU4_TRIEI 858 0.0 UniRef50_D1B2U8 ATPase AAA-2 domain protein n=4 Tax=Bacteria Rep... 858 0.0 UniRef50_B5Y5I5 Predicted protein n=4 Tax=cellular organisms Rep... 858 0.0 UniRef50_Q822Q4 Chaperone protein clpB n=11 Tax=cellular organis... 856 0.0 UniRef50_Q9ZMH1 Chaperone protein clpB n=85 Tax=Bacteria RepID=C... 842 0.0 UniRef50_P31541 ATP-dependent Clp protease ATP-binding subunit c... 837 0.0 UniRef50_P35100 ATP-dependent Clp protease ATP-binding subunit c... 829 0.0 UniRef50_D2VCN5 Heat shock protein 101 n=1 Tax=Naegleria gruberi... 827 0.0 UniRef50_C8NK17 ATP-dependent Clp protease ATP-binding subunit n... 823 0.0 UniRef50_Q8IB03 ClpB protein, putative n=13 Tax=cellular organis... 822 0.0 UniRef50_D0D9L8 Chaperone protein ClpB n=1 Tax=Citreicella sp. S... 822 0.0 UniRef50_C8NYT7 ATP-dependent Clp protease ATP-binding subunit n... 821 0.0 UniRef50_B5HY88 Chaperone protein clpB n=1 Tax=Streptomyces svic... 819 0.0 UniRef50_C3XDZ0 ATP-dependent protease ATP-binding subunit n=2 T... 818 0.0 UniRef50_B0EI70 Heat shock protein, putative n=1 Tax=Entamoeba d... 817 0.0 UniRef50_P31540 Heat shock protein hsp98 n=59 Tax=Dikarya RepID=... 812 0.0 UniRef50_Q4UAC3 ClpB protein, putative n=8 Tax=cellular organism... 802 0.0 UniRef50_P37571 Negative regulator of genetic competence clpC/me... 799 0.0 UniRef50_P33416 Heat shock protein 78, mitochondrial n=49 Tax=Di... 791 0.0 UniRef50_Q4FY62 Serine peptidase, putative n=12 Tax=cellular org... 790 0.0 UniRef50_A8B6K3 ClpB protein n=1 Tax=Giardia lamblia ATCC 50803 ... 787 0.0 UniRef50_C4R0B7 Oligomeric mitochondrial matrix chaperone n=48 T... 784 0.0 UniRef50_P31539 Heat shock protein 104 n=15 Tax=Eukaryota RepID=... 781 0.0 UniRef50_C9KP02 Negative regulator of genetic competence ClpC/Me... 779 0.0 UniRef50_Q4L3I4 ATP-dependent Clp protease ATP-binding subunit c... 770 0.0 UniRef50_Q47KW3 ATPase n=56 Tax=root RepID=Q47KW3_THEFY 766 0.0 UniRef50_A4E9C6 Putative uncharacterized protein n=3 Tax=Collins... 764 0.0 UniRef50_Q025Q2 ATPase AAA-2 domain protein n=12 Tax=Bacteria Re... 759 0.0 UniRef50_D1HM97 Whole genome shotgun sequence of line PN40024, s... 758 0.0 UniRef50_Q8DTC7 Chaperone protein clpB n=2 Tax=Streptococcus mut... 757 0.0 UniRef50_Q83FI1 Chaperone protein clpB n=13 Tax=Bacteria RepID=C... 754 0.0 UniRef50_B7VTU3 Chaperone ClpB n=1 Tax=Vibrio splendidus LGP32 R... 743 0.0 UniRef50_B7FUC8 Predicted protein n=1 Tax=Phaeodactylum tricornu... 742 0.0 UniRef50_A5IMI3 ATPase AAA-2 domain protein n=8 Tax=Thermotogace... 741 0.0 UniRef50_C7PZ63 ATPase AAA-2 domain protein n=7 Tax=Actinomyceta... 741 0.0 UniRef50_C2D9C6 ATPase with chaperone activity, ATP-binding subu... 738 0.0 UniRef50_Q7U3T3 Chaperone protein clpB 2 n=10 Tax=cellular organ... 736 0.0 UniRef50_B5Y8V8 Negative regulator of genetic competence ClpC/me... 736 0.0 UniRef50_A9FG71 ATPase with chaperone activity, two ATP-binding ... 735 0.0 UniRef50_C1SG60 ATPase with chaperone activity, ATP-binding subu... 734 0.0 UniRef50_C6HIF6 Heat shock protein n=1 Tax=Ajellomyces capsulatu... 731 0.0 UniRef50_O78410 ATP-dependent Clp protease ATP-binding subunit c... 728 0.0 UniRef50_A7JYI1 ATPases with chaperone activity, ATP-binding sub... 728 0.0 UniRef50_C1EC57 ATP-dependent clp protease n=2 Tax=Micromonas Re... 726 0.0 UniRef50_C6HYE9 ATPase AAA-2 domain protein n=1 Tax=Leptospirill... 724 0.0 UniRef50_P42762 ERD1 protein, chloroplastic n=22 Tax=cellular or... 724 0.0 UniRef50_A6FFT5 Putative ATPase with chaperone activity n=1 Tax=... 719 0.0 UniRef50_Q6KHS7 ATP-dependent Clp protease, ATPase subunit n=3 T... 719 0.0 UniRef50_Q9PKA8 Probable ATP-dependent Clp protease ATP-binding ... 719 0.0 UniRef50_Q1WVA6 Negative regulator of genetic competence n=19 Ta... 719 0.0 UniRef50_Q54316 Hemolysin B n=25 Tax=cellular organisms RepID=HL... 718 0.0 UniRef50_A1STR4 Chaperone endopeptidase Clp ATP-binding chain B,... 717 0.0 UniRef50_A6X7G2 ATPase AAA-2 domain protein n=64 Tax=cellular or... 716 0.0 UniRef50_Q7NAZ3 Chaperone protein clpB n=5 Tax=Mollicutes RepID=... 714 0.0 UniRef50_A6FZR3 ATP-dependent chaperone protein ClpB n=3 Tax=Pro... 713 0.0 UniRef50_Q46HG6 ATPase n=17 Tax=Cyanobacteria RepID=Q46HG6_PROMT 712 0.0 UniRef50_Q21KI1 ATPase AAA-2 n=7 Tax=Gammaproteobacteria RepID=Q... 711 0.0 UniRef50_Q2SEG4 ATPase with chaperone activity, ATP-binding subu... 710 0.0 UniRef50_Q9I742 Protein clpV1 n=17 Tax=Proteobacteria RepID=CLPV... 710 0.0 UniRef50_Q8EW28 Chaperone protein clpB n=2 Tax=Bacteria RepID=CL... 709 0.0 UniRef50_A4FF35 Clp protease ATP binding subunit n=7 Tax=Bacteri... 708 0.0 UniRef50_B5ZBN7 Chaperone protein ClpB n=44 Tax=cellular organis... 706 0.0 UniRef50_B3L4X1 Heat shock protein 101, putative n=8 Tax=Plasmod... 704 0.0 UniRef50_D2KTB1 BC18 (Fragment) n=1 Tax=Babesia caballi RepID=D2... 703 0.0 UniRef50_Q1N528 ATPase with chaperone activity, ATP-binding subu... 702 0.0 UniRef50_B6EJJ8 Chaperone ClpB-1 n=12 Tax=Proteobacteria RepID=B... 701 0.0 UniRef50_B0SCX5 Endopeptidase Clp, ATP-dependent proteolytic sub... 701 0.0 UniRef50_C7RF24 ATPase AAA-2 domain protein n=1 Tax=Anaerococcus... 701 0.0 UniRef50_Q2T6Y8 ATP-dependent Clp protease, ATP-binding subunit ... 700 0.0 UniRef50_C9XYK6 Chaperone protein clpB n=1 Tax=Cronobacter turic... 698 0.0 UniRef50_Q046D3 ATP-binding subunit of Clp protease and DnaK/Dna... 697 0.0 UniRef50_C9M6K4 Negative regulator of genetic competence ClpC/Me... 697 0.0 UniRef50_Q2S2Z0 ATP-dependent Clp protease, ATPase subunit n=63 ... 696 0.0 UniRef50_A5WFU1 ATP-dependent Clp protease ATP-binding subunit C... 696 0.0 UniRef50_A7APH1 Clp amino terminal domain containing protein n=1... 696 0.0 UniRef50_B8L5D3 Type VI secretion ATPase, ClpV1 family n=1 Tax=S... 695 0.0 UniRef50_D2QZM9 Type VI secretion ATPase, ClpV1 family n=6 Tax=B... 694 0.0 UniRef50_D1J7B8 ATP-dependent Clp protease ATP-binding subunit c... 693 0.0 UniRef50_C9LKK9 Negative regulator of genetic competence ClpC/Me... 693 0.0 UniRef50_C1MLM7 Predicted protein n=1 Tax=Micromonas pusilla CCM... 692 0.0 UniRef50_Q8SQU0 HSP 101 RELATED PROTEIN n=2 Tax=Apansporoblastin... 691 0.0 UniRef50_B6R3N5 Type VI secretion ATPase, ClpV1 family n=4 Tax=P... 689 0.0 UniRef50_D1TDQ5 Type VI secretion ATPase n=1 Tax=Burkholderia sp... 687 0.0 UniRef50_Q030Z1 ATP-binding subunit of Clp protease and DnaK/Dna... 686 0.0 UniRef50_C1GY73 Chaperone protein clpB n=1 Tax=Paracoccidioides ... 686 0.0 UniRef50_B8EIH7 Type VI secretion ATPase, ClpV1 family n=56 Tax=... 686 0.0 UniRef50_A8I1M5 ClpD chaperone, Hsp100 family n=1 Tax=Chlamydomo... 685 0.0 UniRef50_Q4AAM9 ATP-dependent protease binding protein n=7 Tax=M... 684 0.0 UniRef50_Q9F746 Chaperone protein clpB n=100 Tax=Proteobacteria ... 684 0.0 UniRef50_Q3LW37 ATP binding subunit of Clp protease n=1 Tax=Bige... 684 0.0 UniRef50_A4RQJ1 Chaperone, Hsp100 family, ClpB-type n=2 Tax=Ostr... 683 0.0 UniRef50_A7ZQR5 ClpA/ClpB family protein n=21 Tax=Proteobacteria... 682 0.0 UniRef50_C7RFB8 ATPase AAA-2 domain protein n=5 Tax=Clostridiale... 681 0.0 UniRef50_B7LFQ0 Putative uncharacterized protein n=1 Tax=Escheri... 681 0.0 UniRef50_A6VUK5 ATPase AAA-2 domain protein n=64 Tax=Gammaproteo... 681 0.0 UniRef50_B7H4I2 Type VI secretion ATPase, ClpV1 family n=26 Tax=... 680 0.0 UniRef50_Q98IM7 Probable ClpA/B-type protease n=6 Tax=Rhizobiale... 678 0.0 UniRef50_A6EIG8 Putative ATP-dependent protease n=1 Tax=Pedobact... 677 0.0 UniRef50_B3XE87 Type VI secretion ATPase, ClpV1 family n=1 Tax=E... 675 0.0 UniRef50_C5ALE8 ATPases with chaperone activity, ATP-binding sub... 674 0.0 UniRef50_A8Q6N1 Putative uncharacterized protein n=1 Tax=Malasse... 674 0.0 UniRef50_Q7N4N8 Similar to ClpA/B-type chaperone n=3 Tax=Enterob... 672 0.0 UniRef50_A0K1M3 ATPase AAA-2 domain protein n=6 Tax=Bacteria Rep... 671 0.0 UniRef50_C5NWX3 Negative regulator of genetic competence ClpC/Me... 670 0.0 UniRef50_A6V7C9 Type VI secretion ATPase, ClpV1 family n=10 Tax=... 669 0.0 UniRef50_A6NVT1 Putative uncharacterized protein n=1 Tax=Bactero... 667 0.0 UniRef50_Q88IA4 Chaperone-associated ATPase, putative n=14 Tax=G... 666 0.0 UniRef50_D2TPV1 T6SS protein Cts2V n=1 Tax=Citrobacter rodentium... 666 0.0 UniRef50_D1ZN19 Whole genome shotgun sequence assembly, scaffold... 664 0.0 UniRef50_A9BLL0 Type VI secretion ATPase, ClpV1 family n=46 Tax=... 663 0.0 UniRef50_D2QJP1 ATPase AAA-2 domain protein n=12 Tax=Bacteria Re... 663 0.0 UniRef50_C4GNT2 ClpB protein n=23 Tax=Yersinia RepID=C4GNT2_YERPN 662 0.0 UniRef50_C5ZYU5 ATP-dependent Clp protease subunit n=2 Tax=Prote... 661 0.0 UniRef50_A9FKV2 Endopeptidase Clp n=6 Tax=Proteobacteria RepID=A... 657 0.0 UniRef50_A9BF41 ATPase AAA-2 domain protein n=14 Tax=cellular or... 655 0.0 UniRef50_B2RGN2 ATP-dependent Clp protease ATP-binding subunit C... 654 0.0 UniRef50_C2BFB3 ATP-binding ClpB chaperone n=1 Tax=Anaerococcus ... 652 0.0 UniRef50_C4V0P0 ATPase with chaperone activity, ATP-binding subu... 650 0.0 UniRef50_B5FD85 Type VI secretion ATPase, ClpV1 family n=2 Tax=V... 649 0.0 UniRef50_B6EJ73 Chaperone ClpB n=1 Tax=Aliivibrio salmonicida LF... 649 0.0 UniRef50_C9SIE3 Heat shock protein n=1 Tax=Verticillium albo-atr... 647 0.0 UniRef50_B9K2G7 ATP-dependent Clp protease ATP-binding subunit n... 645 0.0 UniRef50_Q7CUP5 ATP-dependent Clp protease, ATP-binding subunit ... 644 0.0 UniRef50_B5FRR8 Chaperone protein clpB n=19 Tax=Gammaproteobacte... 640 0.0 UniRef50_B8NZA1 Predicted protein (Fragment) n=1 Tax=Postia plac... 639 0.0 UniRef50_Q6TKU1 Aec27 n=39 Tax=cellular organisms RepID=Q6TKU1_E... 638 0.0 UniRef50_Q3JGS2 ATP-dependent Clp protease ATP-binding subunit n... 632 e-179 UniRef50_UPI0001C37703 ATPase AAA-2 domain protein n=1 Tax=Rumin... 631 e-179 UniRef50_D1PA52 Negative regulator of genetic competence n=1 Tax... 631 e-179 UniRef50_A3DC71 ATPase AAA-2 n=13 Tax=Clostridiales RepID=A3DC71... 630 e-179 UniRef50_Q53N47 ATP-dependent Clp protease ATP-binding subunit c... 630 e-179 UniRef50_D1Y1U8 Chaperone protein ClpB 1 n=1 Tax=Pyramidobacter ... 627 e-178 UniRef50_B6KUA3 ClpB protein, putative n=3 Tax=Toxoplasma gondii... 622 e-176 UniRef50_C7H8Y8 Clp protease, ATP-binding subunit ClpC n=3 Tax=C... 620 e-176 UniRef50_C7PG59 ATPase AAA-2 domain protein n=1 Tax=Chitinophaga... 619 e-175 UniRef50_A6G683 Probable ATP-dependent Clp protease n=1 Tax=Ples... 617 e-175 UniRef50_A8MFR5 ATPase AAA-2 domain protein n=3 Tax=Clostridiale... 615 e-174 UniRef50_C2MCW4 ATP-dependent Clp protease, ATP-binding subunit ... 592 e-167 UniRef50_A8JF08 ClpB chaperone, Hsp100 family (Fragment) n=1 Tax... 591 e-167 UniRef50_B6KIW5 Heat shock protein, putative n=3 Tax=Toxoplasma ... 590 e-167 UniRef50_Q9S5Z2 ATP-dependent Clp protease ATP-binding subunit c... 588 e-166 UniRef50_Q9KAV7 ATP-dependent proteinase n=3 Tax=Bacillus RepID=... 586 e-165 UniRef50_C4RIQ4 ATPase n=1 Tax=Micromonospora sp. ATCC 39149 Rep... 584 e-165 UniRef50_UPI000185C840 putative chaperone protein n=1 Tax=Capnoc... 578 e-163 UniRef50_C4I651 Type VI secretion ATPase, ClpV1 family n=52 Tax=... 572 e-161 UniRef50_A5FES3 ATPase AAA-2 domain protein n=1 Tax=Flavobacteri... 569 e-160 UniRef50_UPI0001C3229B ATPase AAA-2 domain protein n=1 Tax=Conex... 557 e-157 UniRef50_Q6GDQ0 ATP-dependent Clp protease ATP-binding subunit c... 555 e-156 UniRef50_D1QW31 Chaperone protein ClpB n=1 Tax=Prevotella oris F... 546 e-153 UniRef50_Q64SE5 ATP-dependent Clp protease ATP-binding subunit n... 536 e-150 UniRef50_C9MS36 ClpB protein n=1 Tax=Prevotella veroralis F0319 ... 530 e-149 UniRef50_B0MPJ8 Putative uncharacterized protein n=1 Tax=Eubacte... 524 e-147 UniRef50_A5K1F9 ATP-dependent Clp protease, putative n=1 Tax=Pla... 511 e-143 UniRef50_A8YTL4 ATP-dependent protease n=26 Tax=Lactobacillus Re... 511 e-143 UniRef50_B3LAU4 ATP-dependent Clp protease, putative n=1 Tax=Pla... 507 e-142 UniRef50_C4W7H5 ATPase AAA-2 domain protein n=1 Tax=Staphylococc... 494 e-138 UniRef50_Q8IM28 ATP-dependent CLP protease, putative n=6 Tax=cel... 491 e-137 UniRef50_B2S3E1 ATP-dependent Clp protease, subunit C n=4 Tax=Tr... 487 e-136 UniRef50_A8I996 ClpB chaperone, Hsp100 family (Fragment) n=1 Tax... 480 e-133 UniRef50_C5WHX6 ATP-dependent endopeptidase clp ATP-binding subu... 474 e-132 UniRef50_C5NWU6 Negative regulator of genetic competence ClpC/Me... 473 e-131 UniRef50_C7HWH6 Negative regulator of genetic competence MecB/cl... 471 e-131 UniRef50_Q8KA87 Probable chaperone protein clpB 2 n=15 Tax=cellu... 467 e-130 UniRef50_B6AFU4 Chaperone clpB family protein n=1 Tax=Cryptospor... 456 e-126 UniRef50_Q93ZM4 AT3g48870/T21J18_140 n=31 Tax=cellular organisms... 452 e-125 UniRef50_C5YMW4 Putative uncharacterized protein Sb07g002440 n=1... 451 e-125 UniRef50_UPI000194EB59 PREDICTED: hypothetical protein, partial ... 451 e-125 UniRef50_B3EPU4 ATPase AAA-2 domain protein n=4 Tax=Chlorobiacea... 441 e-122 UniRef50_B3QUJ2 ATPase AAA-2 domain protein n=1 Tax=Chloroherpet... 437 e-121 UniRef50_A4W448 ATPases with chaperone activity, ATP-binding sub... 421 e-116 UniRef50_B0JIB9 ATP-dependent Clp protease ATPase subunit n=11 T... 420 e-115 UniRef50_D2VM27 Predicted protein n=1 Tax=Naegleria gruberi RepI... 420 e-115 UniRef50_A7AW26 Chaperone clpB, putative n=1 Tax=Babesia bovis R... 418 e-115 UniRef50_D1Y107 Negative regulator of genetic competence ClpC/Me... 416 e-114 UniRef50_C9RMJ0 ATPase AAA-2 domain protein n=1 Tax=Fibrobacter ... 412 e-113 UniRef50_Q1IZ22 ATPase AAA-2 n=8 Tax=Deinococci RepID=Q1IZ22_DEIGD 411 e-113 UniRef50_A7HJU2 ATPase AAA-2 domain protein n=4 Tax=Thermotogace... 408 e-112 UniRef50_Q3JL54 ATP-dependent Clp protease, ATP-binding subunit ... 406 e-111 UniRef50_C3KS27 Chaperone ClpB n=2 Tax=Clostridium botulinum Rep... 401 e-110 UniRef50_C1ASB5 Putative ATP-dependent Clp protease ATP-binding ... 400 e-110 UniRef50_A6Q1Y5 ATP-dependent Clp protease, ATP-binding subunit ... 396 e-108 UniRef50_A4FG52 Clp protease ATP binding subunit n=1 Tax=Sacchar... 391 e-107 UniRef50_Q6ETV8 Putative uncharacterized protein n=4 Tax=Poaceae... 390 e-107 UniRef50_A9AYE5 ATPase AAA-2 domain protein n=1 Tax=Herpetosipho... 387 e-105 UniRef50_A3CMZ1 ATPases with chaperone activity, ATP-binding sub... 387 e-105 UniRef50_Q7XL03 OJ000315_02.14 protein n=2 Tax=Oryza sativa Japo... 384 e-105 UniRef50_Q0E0M6 Os02g0537400 protein n=2 Tax=Poaceae RepID=Q0E0M... 384 e-105 UniRef50_B3ERL7 Putative uncharacterized protein n=1 Tax=Candida... 383 e-104 UniRef50_UPI000198575F PREDICTED: hypothetical protein n=1 Tax=V... 383 e-104 UniRef50_A8EW19 ATP-dependent Clp protease, ATP-binding subunit ... 381 e-104 UniRef50_A8SAZ3 Putative uncharacterized protein n=1 Tax=Faecali... 380 e-103 UniRef50_A3K6L5 ATP-dependent Clp protease, ATP-binding subunit ... 379 e-103 UniRef50_C7H753 ATP-dependent Clp protease, ATP-binding subunit ... 378 e-103 UniRef50_A4S065 Chaperone, Hsp100 family, ClpC-type n=4 Tax=Mami... 376 e-102 UniRef50_UPI0001C372BC ATPase n=1 Tax=Ruminococcus flavefaciens ... 375 e-102 UniRef50_C5ZY74 ATP-dependent Clp protease, ATP-binding subunit ... 375 e-102 UniRef50_B9H7W9 Predicted protein n=3 Tax=rosids RepID=B9H7W9_POPTR 374 e-102 UniRef50_A6QBZ7 ATP-dependent Clp protease, ATP-binding subunit ... 373 e-101 UniRef50_A5MZQ1 ClpA n=7 Tax=Clostridium RepID=A5MZQ1_CLOK5 372 e-101 UniRef50_B8J0Q4 ATP-dependent Clp protease, ATP-binding subunit ... 372 e-101 UniRef50_C4YJT6 Heat shock protein 78, mitochondrial n=1 Tax=Can... 370 e-100 UniRef50_B8BXC6 Member of the clp superfamily, regulatory gamma ... 369 e-100 UniRef50_C3XML9 Endopeptidase subunit Clp ATP-binding A n=1 Tax=... 368 e-100 UniRef50_Q73KU3 ATP-dependent Clp protease, ATP-binding subunit ... 366 2e-99 UniRef50_P05444 ClpA homolog protein n=766 Tax=cellular organism... 365 5e-99 UniRef50_Q4U8P5 Endopeptidase (CLP homologue) ATP-binding chain,... 365 5e-99 UniRef50_A3DES0 ATP-dependent Clp protease ATP-binding subunit C... 364 7e-99 UniRef50_C6V4H7 ATP-dependent Clp protease, ATP-binding subunit ... 363 1e-98 UniRef50_Q2GGQ4 ATP-dependent Clp protease, ATP-binding subunit ... 362 3e-98 UniRef50_B0MVC3 Putative uncharacterized protein n=3 Tax=Bactero... 362 3e-98 UniRef50_A6KY28 ATP-dependent Clp protease, ATP-binding subunit ... 357 1e-96 UniRef50_B1GUR2 ATP-dependent Clp protease-like protein n=1 Tax=... 355 6e-96 UniRef50_B7GCV2 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 353 1e-95 UniRef50_C9PUC6 ATP-dependent Clp protease subunit n=1 Tax=Prevo... 353 2e-95 UniRef50_C5LIJ2 ATP-dependent Clp protease, putative n=3 Tax=Per... 352 3e-95 UniRef50_B8BRH2 Member of the clp superfamily, regulatory gamma ... 350 2e-94 UniRef50_C3XFH5 ATP-dependent Clp protease ClpB n=1 Tax=Helicoba... 343 2e-92 UniRef50_Q9ZN31 ATP-DEPENDENT PROTEASE,ATP-BINDING SUBUNIT n=17 ... 338 4e-91 UniRef50_D1AUG7 ATP-dependent clp protease ATP-binding subunit n... 335 3e-90 UniRef50_B0H033 Chaperone ClpB 1 (Fragment) n=3 Tax=Gammaproteob... 333 1e-89 UniRef50_B2S440 ATP-dependent Clp protease, subunit A n=2 Tax=Tr... 332 5e-89 UniRef50_A0RNV1 ATP-dependent Clp protease ATP-binding subunit C... 328 4e-88 UniRef50_A8RF26 Putative uncharacterized protein n=1 Tax=Eubacte... 328 4e-88 UniRef50_C3RJA5 ATPase n=3 Tax=Bacteria RepID=C3RJA5_9MOLU 324 8e-87 UniRef50_A9FU98 Endopeptidase ATPase with chaperone activity,two... 324 1e-86 UniRef50_D1PH53 ATP-dependent Clp protease, ATP-binding subunit ... 323 1e-86 UniRef50_A7H2P9 ATP-dependent Clp protease, ATP-binding subunit ... 323 2e-86 UniRef50_B9Y438 Putative uncharacterized protein n=1 Tax=Holdema... 323 2e-86 UniRef50_A3A5U3 Putative uncharacterized protein n=2 Tax=Oryza s... 322 3e-86 UniRef50_A5UYN2 ATPase AAA-2 domain protein n=1 Tax=Roseiflexus ... 318 6e-85 UniRef50_A7HAC7 ATPase AAA-2 domain protein n=6 Tax=Cystobacteri... 317 9e-85 UniRef50_UPI0001973947 ATP-dependent Clp protease, ATP-binding s... 317 1e-84 UniRef50_C5IFU1 Heat shock protein n=1 Tax=Eimeria tenella RepID... 316 3e-84 Sequences not found previously or not previously below threshold: >UniRef50_Q7VQF3 Chaperone protein clpB n=10 Tax=Proteobacteria RepID=CLPB_BLOFL Length = 872 Score = 940 bits (2429), Expect = 0.0, Method: Composition-based stats. Identities = 585/861 (67%), Positives = 704/861 (81%), Gaps = 5/861 (0%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEG-GSVSPLLTSAGINAGQ 59 MRLDR FQLAL+DAQS+A+G DNQFIEP+H+M L ++ S+ LL AG N Q Sbjct: 1 MRLDRFDRSFQLALSDAQSIAIGKDNQFIEPVHVMYTFLKEKKYKSIRNLLIHAGSNVDQ 60 Query: 60 LRTDINQALNRLPQVEGTGGD--VQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALE 117 L + Q N LP+VE GD VQ S LV++LNLCDKLAQK N I SE+F++AAL+ Sbjct: 61 LYKSVEQVCNDLPRVESVDGDREVQCSHALVKILNLCDKLAQKYHSNIIFSEVFIIAALQ 120 Query: 118 SRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKL 177 S+ L+ +LK +G + + ++ + S++D +++ Q L+++T+D+T AEQ L Sbjct: 121 SQDVLSILLKKSGIVKELLEKLVQYEQSNYSIHDDSFKNRTQILEQFTVDITSLAEQNNL 180 Query: 178 DPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRV 237 DPVIGRDEEIRRTIQVLQRRTKNNPVLIG PGVGKTAIVEGLAQRIIN EVPEGLK R+ Sbjct: 181 DPVIGRDEEIRRTIQVLQRRTKNNPVLIGNPGVGKTAIVEGLAQRIINKEVPEGLKNSRI 240 Query: 238 LALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGN 297 L+LD+ AL+AG KYRGEFEER K VL ++K + N ILFIDELH MVGAGK DG+MDA N Sbjct: 241 LSLDIAALLAGTKYRGEFEERFKKVLYAVSK-DNNTILFIDELHVMVGAGKTDGSMDASN 299 Query: 298 MLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERY 357 M+KP LARGELHCVGATTLDEY +YIEKDAALERRFQK+F+ EP++E+TIAILRGLKERY Sbjct: 300 MIKPKLARGELHCVGATTLDEYSRYIEKDAALERRFQKIFIIEPNIENTIAILRGLKERY 359 Query: 358 ELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDR 417 ELHH+V ITDPAIVAAATLS+RYI+DRQLPDKAIDLIDEAASSIR+QIDSKPE+LDRLDR Sbjct: 360 ELHHNVHITDPAIVAAATLSNRYISDRQLPDKAIDLIDEAASSIRIQIDSKPEDLDRLDR 419 Query: 418 RIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKA 477 RIIQLKLE QAL KESDE SKKRL++L+ ELS KE++YS LE EWK E++SL Q IK+ Sbjct: 420 RIIQLKLECQALKKESDELSKKRLEILSMELSQKEQEYSVLESEWKRERSSLFDIQNIKS 479 Query: 478 ELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIA 537 +LE+AK ++Q+RR+GDLA+MSELQYG+IPELEK+L A Q K MRLLRN V++ EIA Sbjct: 480 DLEKAKTILDQSRRIGDLAQMSELQYGRIPELEKKLFNAIQSSNKKMRLLRNYVSEVEIA 539 Query: 538 EVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRP 597 EVL++WTGIP+SR++ +E+ KLL ME LH VIGQ+EAV +SNAIRRSR+GL+DP RP Sbjct: 540 EVLSKWTGIPISRILANEKNKLLNMETILHQLVIGQDEAVRVISNAIRRSRSGLSDPKRP 599 Query: 598 IGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYE 657 IGSF+FLGPTGVGKTELCKAL+ F+FD+D AMVRIDMSEFMEKHSVS+L+GAPPGY+GYE Sbjct: 600 IGSFMFLGPTGVGKTELCKALSQFLFDTDNAMVRIDMSEFMEKHSVSKLLGAPPGYIGYE 659 Query: 658 EGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMT 717 G YLTE++RRRPYS++LLDE+EKAH DVFNILLQVLDDGRLTD QGR VDF NTV+IMT Sbjct: 660 SGAYLTESIRRRPYSIVLLDEIEKAHLDVFNILLQVLDDGRLTDNQGRMVDFNNTVIIMT 719 Query: 718 SNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQI 777 SNLGSDLIQ++F DY MK+ VL VV+ FRPEFINRIDE+VVFHPL +H+ IA I Sbjct: 720 SNLGSDLIQKKFDISDYDTMKKTVLNVVNQYFRPEFINRIDEIVVFHPLSIKHLIDIANI 779 Query: 778 QLKRLYKRLEERGY-EIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSG 836 QLK LY RLEERGY I+++AL LS+ G+DP+YGARPLKR IQQ IENPL+Q+ILS Sbjct: 780 QLKYLYSRLEERGYPRTGITNKALLFLSKIGFDPIYGARPLKRIIQQYIENPLSQKILSD 839 Query: 837 ELVPGKVIRLEVNEDRIVAVQ 857 +L+PG+ I ++V D IV +Q Sbjct: 840 DLLPGRSITIDVQNDNIVFIQ 860 >UniRef50_A1A3G2 Chaperone clpB n=4 Tax=Bacteria RepID=A1A3G2_BIFAA Length = 905 Score = 920 bits (2378), Expect = 0.0, Method: Composition-based stats. Identities = 455/868 (52%), Positives = 619/868 (71%), Gaps = 27/868 (3%) Query: 5 RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDI 64 + T Q AL+DA A N ++ LHL+ A+L QE L+ +AG NA + ++ Sbjct: 4 KFTQMAQEALSDAVQNAAALGNPQVDTLHLLDAMLRQENSMARALIEAAGGNAQNVSAEV 63 Query: 65 NQALNRLPQVEG-TGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLA-ALESRGTL 122 +QA+ LP G T S+ L VL+ +K Q+RGD +++ +L ++A A Sbjct: 64 HQAMQSLPSASGSTTTQPDVSRQLSAVLSQAEKEMQRRGDEYVTVDLMLVAIAAAKPNQS 123 Query: 123 ADILKAAGATTANITQAIEQMR-GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVI 181 ADIL+ G T + A+ R V AE +AL+KY+ DLT A++GKLDPVI Sbjct: 124 ADILEKNGLTADKLRNALTAARGSDRKVTSADAEGSYKALEKYSTDLTAAAKEGKLDPVI 183 Query: 182 GRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALD 241 GRD+EIRR IQ+L RRTKNNPVLIGEPGVGKTA+VEGLAQRI+ G+VP L+ +++++LD Sbjct: 184 GRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQNKKLISLD 243 Query: 242 MGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKP 301 +G++VAG+KYRGEFEERLK VL ++ K +G +I FIDE+HT+VGAG A+G+MDAGNMLKP Sbjct: 244 LGSMVAGSKYRGEFEERLKSVLEEIKKADGQIITFIDEIHTIVGAGAAEGSMDAGNMLKP 303 Query: 302 ALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHH 361 LARGEL +GATTLDEYR+ IEKD ALERRFQ+VFV EPSVEDT+AILRG+ +YE HH Sbjct: 304 MLARGELRLIGATTLDEYRENIEKDPALERRFQQVFVGEPSVEDTVAILRGIAPKYEAHH 363 Query: 362 HVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQ 421 V I D A+VAAATLS+RYI+ RQLPDKAIDL+DEAA+ +RM++DS PEE+D L R++ + Sbjct: 364 KVTIGDDALVAAATLSNRYISGRQLPDKAIDLVDEAAAHLRMELDSSPEEIDELRRQVDR 423 Query: 422 LKLEQQAL-------------MKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKAS 468 LK+E+ L E D+++K RL LN+E++DK + + L+ W AEK Sbjct: 424 LKMEKSYLLGNPKNDKATEKAEAELDDSAKDRLADLNQEIADKSEKLNGLKARWDAEKNG 483 Query: 469 LSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKT----- 523 + ++ +L++ + E+ R GDLA+ S + YG+IP ++K++ A + E ++ Sbjct: 484 HNRIGDLRKKLDELRTQAEKYEREGDLAKSSAINYGEIPAIQKEIAQAEKNEAESGGADN 543 Query: 524 ----MRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDA 579 + ++ ++V IAE+++ WTGIPV R+M+ E EKLL ME+ L RVIGQ EA+ A Sbjct: 544 ANADVPMVPDRVDADSIAEIVSDWTGIPVGRLMQGENEKLLHMEEYLGKRVIGQKEAIQA 603 Query: 580 VSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFME 639 VS+A+RRSRAG++DPNRP GSFLFLGPTGVGKTEL KALA+F+FD ++AMVRIDMSE+ME Sbjct: 604 VSDAVRRSRAGISDPNRPTGSFLFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYME 663 Query: 640 KHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRL 699 K SVSRL+GA PGY+GYEEGG LTEAVRRRPYSV+L DEVEKA+P+VF++LLQVLDDGRL Sbjct: 664 KASVSRLIGAAPGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKANPEVFDVLLQVLDDGRL 723 Query: 700 TDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDE 759 TDGQGRTVDF+NT++IMTSNLGS + ++D K+ V+ V F+PEFINR+DE Sbjct: 724 TDGQGRTVDFKNTILIMTSNLGSQFLVN--PDMDADAKKKAVMDAVHMQFKPEFINRLDE 781 Query: 760 VVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKR 819 +V+FHPL + + I IQ+ ++ RL +R + ++D A + L+ GYDP YGARPL+R Sbjct: 782 LVMFHPLTREELGGIVDIQVAQVSARLTDRRITLDVTDSAREWLANTGYDPAYGARPLRR 841 Query: 820 AIQQQIENPLAQQILSGELVPGKVIRLE 847 +Q ++ + LA+ +L+GE+ G + ++ Sbjct: 842 LVQTEVGDQLARMLLAGEVHDGDTVLVD 869 >UniRef50_D2NR34 ATPase with chaperone activity, ATP-binding subunit n=3 Tax=Actinobacteria (class) RepID=D2NR34_9MICC Length = 959 Score = 919 bits (2374), Expect = 0.0, Method: Composition-based stats. Identities = 466/851 (54%), Positives = 618/851 (72%), Gaps = 5/851 (0%) Query: 4 DRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTD 63 ++ T K Q ++ A + A N IE H++ AL++Q G +L +AG++ + Sbjct: 93 NKFTTKSQEVISAANTNAQTAGNPTIETAHILKALMDQREGVAVAVLKAAGLDVDAISEA 152 Query: 64 INQALNRLPQVEGTG-GDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTL 122 + + +LP+ G + S+ + L AQ GD ++S+E+ +L + Sbjct: 153 ASAEIKKLPKASGASVQNASLSRAALSALQAAQTRAQGFGDTYVSTEMILLGIASGTDST 212 Query: 123 ADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIG 182 A + GAT I Q I +RG +V+ E QAL+KY DLT A GKLDPVIG Sbjct: 213 ATAMHKLGATAELIAQTIPNVRGDRTVDTPDPEGTFQALEKYGTDLTAIARAGKLDPVIG 272 Query: 183 RDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDM 242 RD EIRR +QVL RRTKNNPVLIGEPGVGKTA+VEGLAQR+++G+VPE L+G+ +++LD+ Sbjct: 273 RDSEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRMVSGDVPESLRGKTLISLDL 332 Query: 243 GALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPA 302 G++VAGAKYRGEFEERLK VL ++ K EG ++ FIDE+HT+VGAG ++G+MDAGNMLKP Sbjct: 333 GSMVAGAKYRGEFEERLKAVLEEIKKSEGQIVTFIDEIHTVVGAGASEGSMDAGNMLKPM 392 Query: 303 LARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHH 362 LARGEL +GATTLDEYR+ IEKD ALERRFQ+V+V EPSV+DTI ILRGLKERYE HH Sbjct: 393 LARGELRLIGATTLDEYRENIEKDPALERRFQQVYVGEPSVDDTIGILRGLKERYEAHHK 452 Query: 363 VQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQL 422 VQI D A+VAAATLS+RYI RQLPDKAIDLIDEAAS +RM+IDS PEE+D+L R + +L Sbjct: 453 VQIADSALVAAATLSNRYIPSRQLPDKAIDLIDEAASRLRMEIDSAPEEIDQLRRAVDRL 512 Query: 423 KLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQA 482 +E+ AL E+D AS +RL+ L ++++DK+ Q L W+AEKASL+ IK ++++ Sbjct: 513 TMEELALADETDPASVERLEALRKDMADKKEQLDALNARWEAEKASLNRVGDIKTQIDEL 572 Query: 483 KIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE--GKTMRLLRNKVTDAEIAEVL 540 + E A+R G+LA S L YG+IP + +LE A + E K ++ +VT +IAEV+ Sbjct: 573 RSRAEVAQREGNLAEASRLLYGEIPAKQAELEEAQRAEDTAKNESMVSEEVTADDIAEVI 632 Query: 541 ARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGS 600 + WTGIP RMM+ E EKLL ME+ + R+IGQ AV AVS+A+RR+RAG++DPNRPIGS Sbjct: 633 SSWTGIPAGRMMQGESEKLLEMEKRIGARLIGQEAAVVAVSDAVRRARAGISDPNRPIGS 692 Query: 601 FLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG 660 FLFLGPTGVGKTEL KALA F FD + A+VRIDMSE+ EKH+VSRLVGAPPGYVG+EEGG Sbjct: 693 FLFLGPTGVGKTELAKALAEFQFDDERALVRIDMSEYSEKHTVSRLVGAPPGYVGHEEGG 752 Query: 661 YLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL 720 LTEAVRRRPYSV+LLDEVEKAHP+VF+ILLQVLDDGRLTDGQGRTVDFRN ++I+TSNL Sbjct: 753 QLTEAVRRRPYSVVLLDEVEKAHPEVFDILLQVLDDGRLTDGQGRTVDFRNVILILTSNL 812 Query: 721 GSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLK 780 GS + + +L + E L VV FRPEF+NR+D++++F PL +++ I +Q+K Sbjct: 813 GSQYLVNQ--DLPFEERSEKALEVVHQAFRPEFLNRLDDIIMFQPLSAENLGQIVGLQIK 870 Query: 781 RLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVP 840 + KRLE+R +++++ AL+ L + GYDP +GARPL+R +Q++I + LA+ ILSG + Sbjct: 871 SMAKRLEDRRLTLNVTEAALEWLGKTGYDPAFGARPLRRLVQREIGDRLARGILSGAIHD 930 Query: 841 GKVIRLEVNED 851 G + ++VN D Sbjct: 931 GDTVTVDVNPD 941 >UniRef50_Q6NF05 Chaperone protein clpB n=18 Tax=cellular organisms RepID=CLPB_CORDI Length = 849 Score = 918 bits (2372), Expect = 0.0, Method: Composition-based stats. Identities = 480/853 (56%), Positives = 624/853 (73%), Gaps = 17/853 (1%) Query: 7 TNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQ 66 T K Q AL +A A N I P HL++A+L QE G P+L + G++ +R + Sbjct: 7 TTKTQEALQEALQKASAAGNPDIRPEHLLAAILGQEDGIAIPVLRATGVDPDVVRREAEA 66 Query: 67 ALNRLPQVEGTG-GDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADI 125 + +LP+ EG + ++D + VLN +LA + GD ++S+E+ + A A++ Sbjct: 67 LVAKLPKAEGANLANPNFNRDALSVLNNAQELAGELGDEYVSTEVLLAAVARGTNDAAEL 126 Query: 126 LKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDE 185 L GAT I +RG + V + EDQ QAL+KY+ DLT RA +GK+DPVIGRD+ Sbjct: 127 LTKRGATYDVIKGVFPSVRGNKKVTTESPEDQFQALEKYSTDLTARAREGKIDPVIGRDQ 186 Query: 186 EIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGAL 245 EIRR +QVL RRTKNNPVLIGEPGVGKTAIVEGLA+RI+ G+VPE LKG+ +++LD+G++ Sbjct: 187 EIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVAGDVPESLKGKTLISLDLGSM 246 Query: 246 VAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKA-DGAMDAGNMLKPALA 304 VAGAKYRGEFEERLK VL+++ EG +I FIDELHT+VGAG D AMDAGNM+KP LA Sbjct: 247 VAGAKYRGEFEERLKAVLDEIKSAEGEIITFIDELHTIVGAGATGDSAMDAGNMIKPLLA 306 Query: 305 RGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQ 364 RGEL VGATTLDEYR+YIEKDAALERRFQ+VFV EPSVED + ILRGLKERYE+HH V+ Sbjct: 307 RGELRLVGATTLDEYRKYIEKDAALERRFQQVFVGEPSVEDAVGILRGLKERYEVHHGVR 366 Query: 365 ITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKL 424 I D A+VAAATLS RYI R LPDKAIDL+DEAAS +RM+IDS P+E+D L+R + +L++ Sbjct: 367 IQDSALVAAATLSDRYITSRFLPDKAIDLVDEAASRLRMEIDSSPQEIDELERIVRRLEI 426 Query: 425 EQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKI 484 E+ AL KE+D ASK RL L +EL+D+ + EL W EK +++ + K ELE+ + Sbjct: 427 EEVALSKETDAASKDRLIKLRQELADEREKLGELVARWNNEKGAINKVREAKEELERLRS 486 Query: 485 AIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWT 544 E A R GD +++EL+YG+IPELEKQ+ A + +T +L +VT IAEV++ WT Sbjct: 487 ESEIAERDGDYGKVAELRYGRIPELEKQVAEAEEHTVETT-MLSEEVTPDTIAEVVSAWT 545 Query: 545 GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFL 604 GIP +M++ E EKLL ME EL RV+GQ+EAV AVS+A+RR+RAG+ADPNRP GSFLFL Sbjct: 546 GIPAGKMLQGETEKLLNMEAELGKRVVGQSEAVVAVSDAVRRARAGVADPNRPTGSFLFL 605 Query: 605 GPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTE 664 GPTGVGKTEL KALA FMFD D AMVRIDMSE+ EKH+V+RLVGAPPGYVGY++GG LTE Sbjct: 606 GPTGVGKTELAKALAEFMFDDDRAMVRIDMSEYGEKHAVARLVGAPPGYVGYDQGGQLTE 665 Query: 665 AVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDL 724 AVRRRPY+V+L DEVEKAHPDVF+ILLQVLD+GRLTDGQGRTVDFRNTV+I+TSNLG+ Sbjct: 666 AVRRRPYTVVLFDEVEKAHPDVFDILLQVLDEGRLTDGQGRTVDFRNTVLILTSNLGAGG 725 Query: 725 IQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYK 784 ++ ++ V F+PEF+NR+D+VV+F PL ++ + I +IQ+ +L + Sbjct: 726 TKDE------------MMDAVKRAFKPEFVNRLDDVVIFDPLSQEQLTHIVEIQIAQLAQ 773 Query: 785 RLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVI 844 RL R + +SD A L+E GY+P YGARPL+R IQQ I + LA+++LSGE+ G + Sbjct: 774 RLAARRLTLAVSDSAKLWLAERGYEPAYGARPLRRLIQQAIGDQLAKKLLSGEVRDGSEV 833 Query: 845 RL--EVNEDRIVA 855 + +++ D +V Sbjct: 834 HVDADLDNDGLVI 846 >UniRef50_Q9RVI3 Chaperone protein clpB n=9 Tax=Bacteria RepID=CLPB_DEIRA Length = 852 Score = 917 bits (2371), Expect = 0.0, Method: Composition-based stats. Identities = 462/856 (53%), Positives = 629/856 (73%), Gaps = 11/856 (1%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M +R T +A+ AQ LA + NQ + H++ LL+ + S LT AG + Sbjct: 1 MNPERFTEASAVAINAAQQLAQENHNQNLTHFHVLRTLLDNDT--ASRALTLAGGDLNTA 58 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG 120 R ++ + +LP+V+G+ G + L R D LA + GD+F++++ +LA Sbjct: 59 RAALDAEIAKLPKVQGSDGQLYLDPALNRAFQKADTLAAQLGDSFVAADTLLLAL----- 113 Query: 121 TLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPV 180 + ++ +A+ + R G++V ++ +E Q AL KY DLT+RA GK DPV Sbjct: 114 -RGEYRGRGLPDEVSLNRAVTEQRKGKTVTNKTSEQQFDALNKYGTDLTQRARDGKFDPV 172 Query: 181 IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL 240 IGRDEEIRR +Q+L RR+KNNPVLIGEPGVGKTAI EGLA RI+ G+VPEGL+ +++++L Sbjct: 173 IGRDEEIRRVMQILLRRSKNNPVLIGEPGVGKTAIAEGLAMRIVKGDVPEGLRDKKIVSL 232 Query: 241 DMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLK 300 +MG+L+AGAK+RGEFEERLKGV++++ K G +ILF+DE+HT+VGAGK +G+ DAGNMLK Sbjct: 233 EMGSLLAGAKFRGEFEERLKGVIDEVVKSAGEIILFVDEIHTIVGAGKTEGSPDAGNMLK 292 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELH 360 PALARGELH +GATTLDEYR+ IEKDAALERRFQ VFV EPSVEDTI+ILRG+KERY++H Sbjct: 293 PALARGELHLIGATTLDEYRE-IEKDAALERRFQPVFVDEPSVEDTISILRGIKERYQVH 351 Query: 361 HHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRII 420 H+V+ITDPA+VAAATLS+RYI DRQLPDKAIDLIDE+A+ +RM ++S PE +D+L RR + Sbjct: 352 HNVEITDPALVAAATLSNRYITDRQLPDKAIDLIDESAARLRMALESSPERIDQLSRRKL 411 Query: 421 QLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELE 480 QL++E++AL +E D S+ RL + +L + +E+ W+AE+ ++ + + +L+ Sbjct: 412 QLEIEREALKREKDVDSQNRLLDIENQLKTLTDELNEVRSRWEAERGEVAALREKREKLD 471 Query: 481 QAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVL 540 + IE+ARR DL + L+YG++P LEK ++ + + K+ +VT+ +IA V+ Sbjct: 472 AVRTQIEKARRDYDLEEAARLEYGELPALEKDVQDLEK-KLKSAEFAHMEVTEEDIAAVV 530 Query: 541 ARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGS 600 +RWTGIPVS++ME EREKLL +E++LH RVIGQ+ A+ +VS+AIRR+RAGL DPNRP+GS Sbjct: 531 SRWTGIPVSKLMEGEREKLLHLEEQLHGRVIGQDRAIVSVSDAIRRARAGLNDPNRPLGS 590 Query: 601 FLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG 660 F+FLGP+GVGKTEL KALA F+FDS +AMVRIDMSE+MEKH+V+RL+GAPPGYVG+EEGG Sbjct: 591 FMFLGPSGVGKTELAKALAEFLFDSSDAMVRIDMSEYMEKHTVARLIGAPPGYVGFEEGG 650 Query: 661 YLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL 720 LTEAVRRRPY+VIL DE+EKAHPDVFN+LLQVLDDGRLTDGQGRTVDFRNT++IMTSN+ Sbjct: 651 QLTEAVRRRPYAVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSNI 710 Query: 721 GSDLIQERFG-ELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQL 779 GS LI E D +K V+ + FRPEF+NR+D+++VF L + + SI IQL Sbjct: 711 GSPLILEMQQRGEDAETIKSAVMDELRGEFRPEFLNRVDDIIVFDALTAKDLQSIVDIQL 770 Query: 780 KRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELV 839 L +RL ER +H++++A L+E GYDP YGARPL+R I Q IE PLA++IL G++ Sbjct: 771 GGLRRRLAERRITLHLTEDAKDKLAELGYDPAYGARPLRRTISQYIETPLAREILGGQIQ 830 Query: 840 PGKVIRLEVNEDRIVA 855 G V+ ++ + Sbjct: 831 DGSVLNVDYGDGGFTF 846 >UniRef50_C4FCQ4 Putative uncharacterized protein n=1 Tax=Bifidobacterium angulatum DSM 20098 RepID=C4FCQ4_9BIFI Length = 910 Score = 917 bits (2369), Expect = 0.0, Method: Composition-based stats. Identities = 455/875 (52%), Positives = 618/875 (70%), Gaps = 30/875 (3%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M ++LTN + A+ DA A N I+ LHL++ALL QE G V L+ +AG +A + Sbjct: 1 MDQNKLTNMSREAITDAVQSASAAGNAQIDVLHLLNALLTQEQGVVRGLIEAAGGDAKAI 60 Query: 61 RTDINQALNRLPQVEG-TGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESR 119 T + AL LP G T QPS+ L +K Q+ GD +IS+E ++ + Sbjct: 61 GTAVRNALTNLPSASGSTTAQPQPSRQFEAALVQSEKEMQQMGDEYISTEHLLIGIAAAA 120 Query: 120 GTLA-DILKAAGATTANITQAIEQMRGG-ESVNDQGAEDQRQALKKYTIDLTERAEQGKL 177 A DIL+A T + A+ +RGG V AE +AL+KY+ DLT A++GKL Sbjct: 121 PNQAADILQANNVTAQALRAAVPTVRGGDRKVTSPDAEGSYKALEKYSTDLTAAAKEGKL 180 Query: 178 DPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRV 237 DPVIGRD+EIRR IQ+L RRTKNNPVLIGEPGVGKTA+VEGLAQRI+ G+VP L+ +++ Sbjct: 181 DPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQNKKL 240 Query: 238 LALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGN 297 ++LD+G++VAG+KYRGEFEERLK VL ++ G +I FIDE+HT+VGAG A+G+MDAGN Sbjct: 241 ISLDLGSMVAGSKYRGEFEERLKSVLEEIKNANGQIITFIDEIHTIVGAGAAEGSMDAGN 300 Query: 298 MLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERY 357 MLKP LARGEL +GATTLDEYR+ IEKD ALERRFQ+VFV EPSVEDTIAILRG+ +Y Sbjct: 301 MLKPMLARGELRLIGATTLDEYRENIEKDPALERRFQQVFVGEPSVEDTIAILRGIAPKY 360 Query: 358 ELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDR 417 E HH V I D A+VAAATLS+RYI+ RQLPDKAIDL+DEAA+ +RM++DS PEE+D L R Sbjct: 361 EAHHKVTIGDDALVAAATLSNRYISGRQLPDKAIDLVDEAAAHLRMELDSSPEEIDELTR 420 Query: 418 RIIQLKLEQQAL-------------MKESDEASKKRLDMLNEELSDKERQYSELEEEWKA 464 ++ +LK+E+ L E D+++K RL LN+E+++K + + L+ W A Sbjct: 421 QVERLKMEKSYLLGNPKNDKAADKAEAELDDSAKDRLADLNKEIANKSEKLNGLKARWDA 480 Query: 465 EKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE---- 520 EK+ + ++ +L++ + E+ R GDLA+ S + YG+IP ++K++ A + E Sbjct: 481 EKSGHNRIGDLRKKLDELRTQAERYEREGDLAKSSAINYGEIPNIQKEIAQAEKNEQNVK 540 Query: 521 --------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIG 572 + ++ ++V +AE+++ WTGIPV R+M+ E EKLL ME L RVIG Sbjct: 541 NGSNAANTAADVPMVPDRVDADSVAEIVSDWTGIPVGRLMQGENEKLLTMEDYLGKRVIG 600 Query: 573 QNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRI 632 Q EA+ AVS+A+RRSRAG++DPNRP GSFLFLGPTGVGKTEL KALA+F+FD ++AMVRI Sbjct: 601 QKEAIKAVSDAVRRSRAGISDPNRPTGSFLFLGPTGVGKTELAKALADFLFDDEKAMVRI 660 Query: 633 DMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQ 692 DMSE+MEK SVSRL+GA PGYVGYE+GG LTEAVRRRPYSV+L DEVEKA+P++F++LLQ Sbjct: 661 DMSEYMEKASVSRLIGAAPGYVGYEQGGQLTEAVRRRPYSVVLFDEVEKANPEIFDVLLQ 720 Query: 693 VLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPE 752 VLDDGRLTDGQGRTVDF+NT++IMTSNLGS + ++D ++ V+ V NF+PE Sbjct: 721 VLDDGRLTDGQGRTVDFKNTILIMTSNLGSQFLVNE--DMDDEAKRKAVMDTVHMNFKPE 778 Query: 753 FINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVY 812 F+NR+D+ V+FHPL + + I IQ+ + RL +R + ++D A + L+ GYDP Y Sbjct: 779 FLNRLDDTVMFHPLTREELGGIVDIQVANVSARLTDRRITLDVTDSAREWLANVGYDPAY 838 Query: 813 GARPLKRAIQQQIENPLAQQILSGELVPGKVIRLE 847 GARPL+R +Q ++ + LA+ +L+G++ G + ++ Sbjct: 839 GARPLRRLVQTEVGDQLARMLLAGKVHDGDTVLVD 873 >UniRef50_P74459 Chaperone protein clpB 1 n=479 Tax=cellular organisms RepID=CLPB1_SYNY3 Length = 898 Score = 912 bits (2358), Expect = 0.0, Method: Composition-based stats. Identities = 463/868 (53%), Positives = 631/868 (72%), Gaps = 15/868 (1%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 + T + A+ +Q +A + N +E H++ ALL Q+ G + + A ++ LR Sbjct: 5 DPTKFTEQAWDAIVKSQEVARRYKNTNLEVEHILLALLEQDMGLAARIFQRAAVDGEGLR 64 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGT 121 + NR P+ + + + L +L+ D D FIS E ++ E Sbjct: 65 QQLEIFTNRQPK-QAYVEQLYLGRSLDVMLDRADAARSSWEDKFISVEHLLVGFAEDDRV 123 Query: 122 LADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVI 181 L+A ++ AI+ +RG + V + E++ +AL KY DLTE+A QGKLDPVI Sbjct: 124 GRKTLRAFNLDPQDLELAIKAIRGSQKVTEPNQEEKYEALDKYGRDLTEQARQGKLDPVI 183 Query: 182 GRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALD 241 GRDEEIRR IQVL RR+KNNPVLIGEPGVGKTAI EGLAQRIING+VPE LK R++++LD Sbjct: 184 GRDEEIRRVIQVLSRRSKNNPVLIGEPGVGKTAIAEGLAQRIINGDVPESLKNRQLISLD 243 Query: 242 MGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGA--MDAGNML 299 MG+L+AGAKYRGEFEERL+ V+ ++ +G +ILFIDE+HT+VGAG +G+ MDAGN+L Sbjct: 244 MGSLIAGAKYRGEFEERLRSVMKEVTNSDGQIILFIDEVHTVVGAGGREGSGSMDAGNLL 303 Query: 300 KPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYEL 359 KP LARGEL C+GATTLDEYR+ IEKD ALERRFQ+V+V +PSV+DTI+ILRGLKE+YE+ Sbjct: 304 KPMLARGELRCIGATTLDEYRKNIEKDPALERRFQQVYVKQPSVDDTISILRGLKEKYEV 363 Query: 360 HHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRI 419 HH V+ITD A+VAAATLSHRYI DR LPDKAIDL+DEAA+ ++M+I SKP EL+ +DRR+ Sbjct: 364 HHGVKITDSALVAAATLSHRYIQDRFLPDKAIDLVDEAAARLKMEITSKPVELEDIDRRL 423 Query: 420 IQLKLEQQALMKE-------SDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGT 472 +QL++E+ +L E +D++SK+RL+ + +E+++ E Q EL +W +EK L Sbjct: 424 MQLQMEKLSLEGEEKRPGLGADKSSKERLEKIQQEITELEGQQQELSGQWLSEKQMLEEI 483 Query: 473 QTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAAT----QLEGKTMRLLR 528 T+K + ++ ++ +E+A R D + ++++YG++ L+ +E +++G LLR Sbjct: 484 NTLKEKEQELRLQVEKAERATDWEKAAKIKYGELEVLQHDIEEKESKLLEIQGSGNTLLR 543 Query: 529 NKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSR 588 +VT+++IAE++A WTGIP++R+ME+ER+KLL++E LH RVIGQ EAV AVS AIRR+R Sbjct: 544 EQVTESDIAEIVAGWTGIPMNRLMETERQKLLQLEGHLHQRVIGQKEAVAAVSAAIRRAR 603 Query: 589 AGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVG 648 AG+ DP+RPIGSFLF+GPTGVGKTEL +ALA F+FDS+EAMVRIDMSE+MEKH+VSRL+G Sbjct: 604 AGMKDPSRPIGSFLFMGPTGVGKTELARALAGFLFDSEEAMVRIDMSEYMEKHAVSRLIG 663 Query: 649 APPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVD 708 APPGYVGYEEGG L+EAVRRRPYSV+LLDEVEKAH DVFNILLQVLDDGR+TD QGR VD Sbjct: 664 APPGYVGYEEGGQLSEAVRRRPYSVVLLDEVEKAHLDVFNILLQVLDDGRITDSQGRVVD 723 Query: 709 FRNTVVIMTSNLGSDLIQE-RFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLG 767 FRNT+++MTSN+GSD I + DY M++ VL + +FRPEF+NRID++++FH L Sbjct: 724 FRNTIIVMTSNIGSDHILSLSADDADYDKMQKQVLQSLRKHFRPEFLNRIDDLIIFHTLK 783 Query: 768 EQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIEN 827 + I +Q+KR+ K L+E+ + +SD AL + GYDP YGARPLKRAIQ+Q+EN Sbjct: 784 RDELRRIVVLQIKRIEKLLDEQKITLSLSDAALDHIVSAGYDPTYGARPLKRAIQRQLEN 843 Query: 828 PLAQQILSGELVPGKVIRLEVNEDRIVA 855 P+A +IL V G I ++ + +++ Sbjct: 844 PIATKILENTFVAGDKILIDCVDGQLIF 871 >UniRef50_P42730 Heat shock protein 101 n=34 Tax=Eukaryota RepID=HS101_ARATH Length = 911 Score = 905 bits (2339), Expect = 0.0, Method: Composition-based stats. Identities = 436/860 (50%), Positives = 593/860 (68%), Gaps = 8/860 (0%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGIN--AG 58 M ++ T+K +A A LA+ + PLHL AL++ G ++SAG A Sbjct: 1 MNPEKFTHKTNETIATAHELAVNAGHAQFTPLHLAGALISDPTGIFPQAISSAGGENAAQ 60 Query: 59 QLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES 118 INQAL +LP D+ S L++V+ + RGD ++ + ++ LE Sbjct: 61 SAERVINQALKKLPSQSPPPDDIPASSSLIKVIRRAQAAQKSRGDTHLAVDQLIMGLLED 120 Query: 119 RGTLADILKAAGATTANITQAIEQMR--GGESVNDQGAEDQRQALKKYTIDLTERAEQGK 176 + D+L G TA + +E++R G+ V + QALK Y DL E+A GK Sbjct: 121 -SQIRDLLNEVGVATARVKSEVEKLRGKEGKKVESASGDTNFQALKTYGRDLVEQA--GK 177 Query: 177 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRR 236 LDPVIGRDEEIRR +++L RRTKNNPVLIGEPGVGKTA+VEGLAQRI+ G+VP L R Sbjct: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPNSLTDVR 237 Query: 237 VLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAG 296 +++LDMGALVAGAKYRGEFEERLK VL ++ EG VILFIDE+H ++GAGK +G+MDA Sbjct: 238 LISLDMGALVAGAKYRGEFEERLKSVLKEVEDAEGKVILFIDEIHLVLGAGKTEGSMDAA 297 Query: 297 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 356 N+ KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V+VAEPSV DTI+ILRGLKE+ Sbjct: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTISILRGLKEK 357 Query: 357 YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 416 YE HH V+I D A++ AA LS RYI R LPDKAIDL+DEA +++R+Q+DS+PEE+D L+ Sbjct: 358 YEGHHGVRIQDRALINAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417 Query: 417 RRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476 R+ +QL++E AL +E D+ASK RL + +EL D + L +++ EK + + +K Sbjct: 418 RKRMQLEIELHALEREKDKASKARLIEVRKELDDLRDKLQPLTMKYRKEKERIDEIRRLK 477 Query: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 536 + E+ ++++A R DLAR ++L+YG I E+E + + +L V I Sbjct: 478 QKREELMFSLQEAERRYDLARAADLRYGAIQEVESAIAQLEGTSSEENVMLTENVGPEHI 537 Query: 537 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNR 596 AEV++RWTGIPV+R+ ++E+E+L+ + LH RV+GQN+AV+AVS AI RSRAGL P + Sbjct: 538 AEVVSRWTGIPVTRLGQNEKERLIGLADRLHKRVVGQNQAVNAVSEAILRSRAGLGRPQQ 597 Query: 597 PIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGY 656 P GSFLFLGPTGVGKTEL KALA +FD + +VRIDMSE+ME+HSVSRL+GAPPGYVG+ Sbjct: 598 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 657 Query: 657 EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 716 EEGG LTEAVRRRPY VIL DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRN+V+IM Sbjct: 658 EEGGQLTEAVRRRPYCVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNSVIIM 717 Query: 717 TSNLGSDLIQERF-GELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIA 775 TSNLG++ + G++ ++ V+ V +FRPE +NR+DE+VVF PL + +A Sbjct: 718 TSNLGAEHLLAGLTGKVTMEVARDCVMREVRKHFRPELLNRLDEIVVFDPLSHDQLRKVA 777 Query: 776 QIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILS 835 ++Q+K + RL ERG + ++D AL + YDPVYGARP++R +++++ L++ ++ Sbjct: 778 RLQMKDVAVRLAERGVALAVTDAALDYILAESYDPVYGARPIRRWMEKKVVTELSKMVVR 837 Query: 836 GELVPGKVIRLEVNEDRIVA 855 E+ + ++ +V Sbjct: 838 EEIDENSTVYIDAGAGDLVY 857 >UniRef50_Q73IE4 Chaperone protein clpB n=14 Tax=Rickettsiales RepID=CLPB_WOLPM Length = 853 Score = 904 bits (2336), Expect = 0.0, Method: Composition-based stats. Identities = 459/857 (53%), Positives = 619/857 (72%), Gaps = 9/857 (1%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M L++ T K + + AQ ALG +Q P HL+ +L E G V L+ + G N + Sbjct: 1 MDLNKFTEKAKSLIQSAQMKALGAGHQIFMPEHLLKVMLEDESGLVQDLINACGGNVQSI 60 Query: 61 RTDINQALNRLPQVEGTG-GDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAA-LES 118 ++ A+ +LP +EG G G +Q S+++ +V +A++ D+F++ E + + Sbjct: 61 SDAVDSAIKKLPVIEGPGSGGLQLSREIAKVFEDSIGIAKRNKDSFVAVERLLQGLTAQK 120 Query: 119 RGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLD 178 T+ IL G T + + +MR G S + +E++ A KKYT D+TE A QGKLD Sbjct: 121 DDTVGKILAENGVTPQKLNSVVAEMRKGSSADSPNSEEKLNAAKKYTKDVTELAMQGKLD 180 Query: 179 PVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVL 238 PVIGRDEEIRRT+QV RRTKNNPVLIGEPGVGKTAIVEGLA RI+ +VP GL +VL Sbjct: 181 PVIGRDEEIRRTMQVSLRRTKNNPVLIGEPGVGKTAIVEGLANRIVANDVPLGLHDAKVL 240 Query: 239 ALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNM 298 ALD+GAL+AG K+RGEFEERLK V+N+L++ EG VILFIDELHT+VGAG GAMDA N+ Sbjct: 241 ALDLGALIAGTKFRGEFEERLKAVINELSRAEGKVILFIDELHTLVGAGATSGAMDASNL 300 Query: 299 LKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYE 358 LKPALARGE+ C+GATTLDEYRQ+IEKD AL RRFQ VF+++P+ DTI+ILRGLKERYE Sbjct: 301 LKPALARGEVRCIGATTLDEYRQHIEKDPALARRFQPVFISQPTETDTISILRGLKERYE 360 Query: 359 LHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418 +HH ++ITD AI+AAATLS+RYI DR LPDKAIDLIDEAAS +R+++DSKPE +D L+R+ Sbjct: 361 VHHGIRITDGAIIAAATLSNRYITDRFLPDKAIDLIDEAASRVRIEMDSKPEVIDELERK 420 Query: 419 IIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAE 478 +IQLK+E +AL KESDE SK+RL +NEE+ + ++++L +W+ EK ++ Q + Sbjct: 421 VIQLKIEAEALKKESDENSKQRLKKINEEIENLNSKFADLNSKWQMEKNKIARIQETAEK 480 Query: 479 LEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAE 538 L+ A+ +E +R G+L R EL YG IP+LE +L E T L+ +VT +IA Sbjct: 481 LDNARKELELVQRSGNLGRAGELMYGVIPQLENEL---KNQEKVTDSFLKKEVTGDDIAN 537 Query: 539 VLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPI 598 ++++WTGIPV MM SE+EKLL ME E+ RVIGQ +A++A+SNA+RRSR+G+ D N+P Sbjct: 538 IVSKWTGIPVDNMMHSEKEKLLNMENEIGRRVIGQKDAIEAISNAVRRSRSGVQDTNKPF 597 Query: 599 GSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEE 658 GSFLFLGPTGVGKTEL KALA F+FD A++R DMSE+MEKHSVS+L+GAPPGYVGYE+ Sbjct: 598 GSFLFLGPTGVGKTELAKALAEFLFDDQSALLRFDMSEYMEKHSVSKLIGAPPGYVGYEQ 657 Query: 659 GGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTS 718 GG LTEAVRRRPY VIL DE+EKA+PD+FN+LLQ+LD+GRLTD G+ +DFRNT++I+TS Sbjct: 658 GGRLTEAVRRRPYQVILFDEIEKANPDIFNLLLQILDEGRLTDSHGKLIDFRNTILILTS 717 Query: 719 NLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQ 778 NLG++++ + + ++ V+ +V FRPEF+NR+DE+++FH L I I +Q Sbjct: 718 NLGAEIMLKGNVD----SVRNEVMQIVKSAFRPEFLNRLDEIIIFHSLTRDDIYKIIDVQ 773 Query: 779 LKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGEL 838 L K L +R I + EA +L+++ GYDP YGARPLKR IQ+ I+N LA+ +LSGE+ Sbjct: 774 FSYLQKTLAKRKLSISLLQEAKELIAQTGYDPEYGARPLKRVIQECIQNNLAKLVLSGEV 833 Query: 839 VPGKVIRLEVNEDRIVA 855 V + + ++ I+ Sbjct: 834 VENDELIVYALDNEILV 850 >UniRef50_Q3L1D0 Heat shock protein 101 n=6 Tax=Eukaryota RepID=Q3L1D0_VITVI Length = 911 Score = 899 bits (2323), Expect = 0.0, Method: Composition-based stats. Identities = 436/855 (50%), Positives = 596/855 (69%), Gaps = 10/855 (1%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGIN---A 57 M ++ T+K LA A LA+ + + PLH+ AL+ G + + AG N A Sbjct: 1 MNPEKFTHKTNETLAGAHELAMNSGHAQLTPLHVAVALITDHNGILRQAIIGAGGNEEAA 60 Query: 58 GQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALE 117 + N+AL +LP ++ S L++V+ + RGD ++ + +L LE Sbjct: 61 NSVERVFNKALKKLPTQSPPPDEIPVSTTLIKVVRRAQSSQKSRGDTHLAVDQLILGLLE 120 Query: 118 SRGTLADILKAAGATTANITQAIEQMR--GGESVNDQGAEDQRQALKKYTIDLTERAEQG 175 + D+LK AG +T+ + +E++R G+ V + QALK Y DL E+A G Sbjct: 121 D-SQIGDLLKEAGVSTSRVKSEVEKLRGKEGKKVESASGDTTFQALKTYGRDLVEQA--G 177 Query: 176 KLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGR 235 KLDPVIGRDEEIRR I++L RRTKNNPVLIGEPGVGKTA+VEGLAQRI+ G+VP L Sbjct: 178 KLDPVIGRDEEIRRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAEV 237 Query: 236 RVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDA 295 R++ALDMGALVAGAKYRGEFEERLK VL ++ + EG VILFIDE+H ++GAG+ +G+MDA Sbjct: 238 RLIALDMGALVAGAKYRGEFEERLKSVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 297 Query: 296 GNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKE 355 N+ KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V+VAEPSV DTI+ILRGLKE Sbjct: 298 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTISILRGLKE 357 Query: 356 RYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRL 415 RYE HH V+I D A+V AA LS RYI R LPDKAIDL+DEA +++R+Q+DS+PEE+D L Sbjct: 358 RYEGHHGVRIQDRALVVAAQLSSRYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 417 Query: 416 DRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTI 475 +R+ +QL++E AL KE D+ASK RL + EL D + L ++K EK + + + Sbjct: 418 ERKRMQLEVELHALEKEKDKASKARLVEVRRELDDLRDKLQPLMMKYKKEKERIDELRRL 477 Query: 476 KAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAE 535 K + E+ A+++A R DLAR ++L+YG I E+E + + M +L V + Sbjct: 478 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIANLEGTTDENM-MLTETVGPEQ 536 Query: 536 IAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPN 595 IAEV++RWTGIPV+R+ ++++E+L+ + + LH RV+GQ++AV AV+ A+ RSRAGL P Sbjct: 537 IAEVVSRWTGIPVTRLGQNDKERLIGLAERLHQRVVGQDQAVSAVAEAVLRSRAGLGRPQ 596 Query: 596 RPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVG 655 +P GSFLFLGPTGVGKTEL KALA +FD + +VRIDMSE+ME+HSVSRL+GAPPGYVG Sbjct: 597 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 656 Query: 656 YEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVI 715 ++EGG LTEAVRRRPYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDF NTV+I Sbjct: 657 HDEGGQLTEAVRRRPYSVVLFDEVEKAHIAVFNTLLQVLDDGRLTDGQGRTVDFTNTVII 716 Query: 716 MTSNLGSDLIQERF-GELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASI 774 MTSNLG++ + G+ ++ V+ V +FRPE +NR+DE+VVF PL + + Sbjct: 717 MTSNLGAEHLLSGLVGKCTMQDARDRVMQEVRRHFRPELLNRLDEIVVFDPLSHDQLRKV 776 Query: 775 AQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQIL 834 A++Q+K + RL ERG + ++D AL ++ YDPVYGARP++R +++++ L++ ++ Sbjct: 777 ARLQMKDVASRLAERGIALAVTDAALDVVLAESYDPVYGARPIRRWLEKKVVTELSKMLI 836 Query: 835 SGELVPGKVIRLEVN 849 E+ + ++ Sbjct: 837 REEIDENSTVYIDAG 851 >UniRef50_Q7UM33 Chaperone protein clpB n=21 Tax=Bacteria RepID=CLPB_RHOBA Length = 881 Score = 891 bits (2302), Expect = 0.0, Method: Composition-based stats. Identities = 479/879 (54%), Positives = 618/879 (70%), Gaps = 26/879 (2%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 R+D+LT + Q +A+AQ+ A N I+PLH++SA +NQ G +PLL ++ +L Sbjct: 3 FRIDKLTTQAQNVVAEAQAQATSAGNAEIDPLHVLSAAVNQRDGITTPLLEKINVDVPKL 62 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG 120 ++ + L +LP G G + S L L A+ D ++S+E ++ + Sbjct: 63 KSLLTSELEKLPHASGM-GQARVSAKLQAALEASATSAESLKDEYVSTEHLLVGLARTDN 121 Query: 121 TLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPV 180 ++L G + ++ A+ Q+RG V D AE QAL+K+ IDLT+ A+ GKLDPV Sbjct: 122 KAKNLLSLLGVSDNDLLTAMSQIRGSARVTDPNAESTYQALEKFGIDLTQLAQSGKLDPV 181 Query: 181 IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL 240 IGRD EIRR IQVL RRTKNNPVLIG+PGVGKTAI EGLA RI G+VP+ LKG++V++L Sbjct: 182 IGRDNEIRRVIQVLSRRTKNNPVLIGQPGVGKTAIAEGLALRIFEGDVPQSLKGKKVVSL 241 Query: 241 DMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLK 300 DMGALVAGAK+RG+FEERLK VL ++ +G VILFIDELH +VGAG A+G+ DA N+LK Sbjct: 242 DMGALVAGAKFRGDFEERLKSVLREVKDSDGKVILFIDELHLVVGAGNAEGSADAANLLK 301 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELH 360 P LARG L C+GATTLDEYRQ+IEKDAALERRFQ VFV EP+VEDT+AILRGLK RYE H Sbjct: 302 PELARGALRCIGATTLDEYRQHIEKDAALERRFQPVFVGEPNVEDTVAILRGLKPRYESH 361 Query: 361 HHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRII 420 H V+ITD A+VAAA LS RYIADR LPDKAIDLIDEAAS + M+ +S PE +DRL RR+ Sbjct: 362 HGVRITDSALVAAANLSDRYIADRFLPDKAIDLIDEAASRLAMEKESVPEPIDRLQRRLR 421 Query: 421 QLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELE 480 QL+L + L+ E + ++ + + EE+ + + + L+E+W+ EK L Q+++ E++ Sbjct: 422 QLELVHRQLVDEQEASAVDKRVEVEEEMESAKAELASLKEQWETEKMGLDDVQSVRQEVD 481 Query: 481 QAKIAIEQ-------------------ARRVGDLARMSELQYGKIPELEKQLEAATQLEG 521 Q + Q + + +R+ ELQ +I E EK ++A Q + Sbjct: 482 QLQHRFAQLDADAKEKQLRGESPEDAYSEMLQVQSRLRELQ-ARIDEAEKHDDSADQTKE 540 Query: 522 ----KTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAV 577 + RLLR +VT+ EIAEV++ WTG+PV+RMME+ER KLL ME+ LH RV+GQ+EAV Sbjct: 541 EPGDEKRRLLRKEVTEEEIAEVVSTWTGVPVTRMMETERAKLLVMEERLHQRVVGQDEAV 600 Query: 578 DAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEF 637 AVS+A+RRSR+GL DPNRPIGSFLFLGPTGVGKTELCKALA MFD + AMVRIDMSEF Sbjct: 601 TAVSDAVRRSRSGLQDPNRPIGSFLFLGPTGVGKTELCKALAEVMFDDESAMVRIDMSEF 660 Query: 638 MEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDG 697 ME+HSVSRL+GAPPGYVGYEEGG LTEAVRRRPY+VILLDE+EKAHPDVFN+LLQVLDDG Sbjct: 661 MERHSVSRLIGAPPGYVGYEEGGKLTEAVRRRPYAVILLDEMEKAHPDVFNVLLQVLDDG 720 Query: 698 RLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYA-HMKELVLGVVSHNFRPEFINR 756 RLTDGQGRTV+F NTVV+MTSN+GS +IQ E M++ V + F PEF+NR Sbjct: 721 RLTDGQGRTVNFTNTVVVMTSNVGSQVIQRVTEEGGGEDEMRQAVEDALKARFLPEFLNR 780 Query: 757 IDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARP 816 ID+ V+FHPL + I I Q+QL+ L RL G I+D A+ ++E GYDP YGARP Sbjct: 781 IDDTVIFHPLQQTQIRRIVQLQLEELRSRLAANGLSFEITDAAIDQIAEVGYDPAYGARP 840 Query: 817 LKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855 LKR IQ++++NPLA IL G I+++ + D+ V Sbjct: 841 LKRVIQREVQNPLASAILKNSYAEGTTIKIDHDGDQFVF 879 >UniRef50_Q6GIB2 Chaperone protein clpB n=1154 Tax=cellular organisms RepID=CLPB_STAAR Length = 869 Score = 880 bits (2274), Expect = 0.0, Method: Composition-based stats. Identities = 448/861 (52%), Positives = 608/861 (70%), Gaps = 12/861 (1%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M ++++T Q AL A L+ H Q IE ++SA LN+ +L A I QL Sbjct: 1 MDINKMTYAVQSALQQAVELSQQHKLQNIEIEAILSAALNESESLYKSILERANIEVDQL 60 Query: 61 RTDINQALNRLPQVEGTGGDV--QPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES 118 LN VEG SQ +++ + ++ D +IS E + +A++ Sbjct: 61 NKAYEDKLNTYASVEGDNIQYGQYISQQANQLITKAESYMKEYEDEYISMEHILRSAMDI 120 Query: 119 RGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLD 178 T + I + I+++RGG V Q E +AL KY DL E QGK+D Sbjct: 121 DQTTKHYINN---KVEVIKEIIKKVRGGNHVTSQNPEVNYEALAKYGRDLVEEVRQGKMD 177 Query: 179 PVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVL 238 PVIGRDEEIR TI++L R+TKNNPVLIGEPGVGKTAIVEGLAQRI+ +VPE L + V Sbjct: 178 PVIGRDEEIRNTIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPESLLDKTVF 237 Query: 239 ALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNM 298 LD+ ALVAGAKYRGEFEERLK VL ++ + +G +ILFIDE+H +VGAGK DGAMDAGNM Sbjct: 238 ELDLSALVAGAKYRGEFEERLKAVLKEVKESDGRIILFIDEIHMLVGAGKTDGAMDAGNM 297 Query: 299 LKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYE 358 LKP LARGELHC+GATTL+EYR+YIEKD+ALERRFQKV V+EP VEDTI+ILRGLKERYE Sbjct: 298 LKPMLARGELHCIGATTLNEYREYIEKDSALERRFQKVAVSEPDVEDTISILRGLKERYE 357 Query: 359 LHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418 ++H V+I D A+VAAA LS RYI DR LPDKAIDL+D+A ++IR ++ S P ELD+++RR Sbjct: 358 VYHGVRIQDRALVAAAELSDRYITDRFLPDKAIDLVDQACATIRTEMGSNPTELDQVNRR 417 Query: 419 IIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAE 478 ++QL++E+ AL ESD ASK+RL L EEL++++ + + L+ ++EK ++ Q +A+ Sbjct: 418 VMQLEIEESALKNESDNASKQRLQELQEELANEKEKQAALQSRVESEKEKIANLQEKRAQ 477 Query: 479 LEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAAT-----QLEGKTMRLLRNKVTD 533 L++++ A+E A+ +L + +ELQYG IP+LEK+L + + R++R VTD Sbjct: 478 LDESRQALEDAQTNNNLEKAAELQYGTIPQLEKELRELEDNFQDEQGEDSDRMIREVVTD 537 Query: 534 AEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLAD 593 EI +++++WTGIPVS+++E+EREKLL + LH RV+GQ++AVD VS+A+ R+RAG+ D Sbjct: 538 EEIGDIVSQWTGIPVSKLVETEREKLLHLSDILHKRVVGQDKAVDLVSDAVVRARAGIKD 597 Query: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGY 653 PNRPIGSFLFLGPTGVGKTEL K+LA +FDS++ M+RIDMSE+MEKH+VSRL+GAPPGY Sbjct: 598 PNRPIGSFLFLGPTGVGKTELAKSLAASLFDSEKHMIRIDMSEYMEKHAVSRLIGAPPGY 657 Query: 654 VGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTV 713 +G++EGG LTEAVRR PYSVILLDEVEKAH DVFN+LLQ+LD+GRLTD +GR+VDF+NT+ Sbjct: 658 IGHDEGGQLTEAVRRNPYSVILLDEVEKAHTDVFNVLLQILDEGRLTDSKGRSVDFKNTI 717 Query: 714 VIMTSNLGSDLIQERFGELD--YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHI 771 +IMTSN+GS ++ E E ++ V+ ++ F+PE +NR+D++V+F PL + Sbjct: 718 IIMTSNIGSQVLLENVKETGEITESTEKAVMTSLNAYFKPEILNRMDDIVLFKPLSIDDM 777 Query: 772 ASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQ 831 + I L +L RL E+ I +SD+A L + Y+P YGARPLKR +Q+QIE PLA+ Sbjct: 778 SMIVDKILTQLNIRLLEQRISIEVSDDAKAWLGQEAYEPQYGARPLKRFVQRQIETPLAR 837 Query: 832 QILSGELVPGKVIRLEVNEDR 852 ++ G I++ +N D Sbjct: 838 MMIKEGFPEGTTIKVNLNSDN 858 >UniRef50_C3XMZ6 ATP-dependent protease ATP-binding subunit n=4 Tax=Helicobacter RepID=C3XMZ6_9HELI Length = 857 Score = 873 bits (2255), Expect = 0.0, Method: Composition-based stats. Identities = 433/858 (50%), Positives = 604/858 (70%), Gaps = 11/858 (1%) Query: 1 MRL-DRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQ 59 M L ++LTN Q L SLAL + NQ IEP+HL A+L ++ L I+ Sbjct: 1 MNLLEKLTNTLQETLEQGASLALHNKNQEIEPIHLFWAMLTNTSSLLNQALNRLNIDKTA 60 Query: 60 LRTDINQALNRLPQVEG-TGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES 118 L + + LPQ T +++ S++L LN D LA K GD++I+ + F+LA L+ Sbjct: 61 LELEAKSIASALPQSSSVTKENLKISRNLSDALNQADGLATKNGDSYIALDTFILANLQE 120 Query: 119 RGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLD 178 L + + + E MR G ++ Q A++ ++L+K+ IDLT++A +GKLD Sbjct: 121 P--TIRNLFSKFLDINELKKTFEAMRAGAKIDSQSADENLESLEKFGIDLTKKAIEGKLD 178 Query: 179 PVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVL 238 PVIGRDEEI +Q+L R+TKNNP+L+GEPGVGKTA+VEGLAQRI+ EVP L+ +RV+ Sbjct: 179 PVIGRDEEITHMMQILIRKTKNNPILLGEPGVGKTAVVEGLAQRIVKKEVPLSLQNKRVI 238 Query: 239 ALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNM 298 ALDM ALVAGAKYRGEFE+RLK V++++ K GNVILFIDE+HT+VGAG ++G MDA N+ Sbjct: 239 ALDMSALVAGAKYRGEFEDRLKKVIDEVKKS-GNVILFIDEIHTIVGAGASEGGMDAANI 297 Query: 299 LKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYE 358 LKPALARGELH +GATTL EYR+Y EKDAAL+RRFQ V + EP+V + + ILRG+KER E Sbjct: 298 LKPALARGELHTIGATTLKEYRKYFEKDAALQRRFQPVMLNEPNVNEALQILRGIKERLE 357 Query: 359 LHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418 HH+V ITD A+VAAA LS RYI DR LPDKAIDLIDEAA+ ++MQI+S+P EL ++ R Sbjct: 358 AHHNVTITDSALVAAAKLSSRYITDRFLPDKAIDLIDEAAAELKMQIESEPSELAKVKRE 417 Query: 419 IIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAE 478 + L++E++AL+ E E ++ R+ + +ELSDKE LE +++ EK + IK E Sbjct: 418 MEALQVEKEALLMEKSEKNQARIAEIQKELSDKEEVKKALEAQFETEKQVFNKIANIKIE 477 Query: 479 LEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEG---KTMRLLRNKVTDAE 535 ++ + A+R GD ++ +E+ YGKIP+LE +L+ Q + LLRN V Sbjct: 478 IDSLRTQSTLAKRNGDFSKAAEIDYGKIPQLENELKEQNQKWENMQENGTLLRNAVLPES 537 Query: 536 IAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPN 595 IA V++RWT IP+ +M++ E++K+L +E+EL V+GQ+ A+ A++ AI+R++AGL++ N Sbjct: 538 IAAVISRWTQIPIKKMLQDEKDKILGIEEELKKDVVGQDNALHAIARAIKRNKAGLSELN 597 Query: 596 RPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVG 655 RPIGSFLFLGPTGVGKTE K LA F+FDS++ ++RIDMSE+MEKH+ SRLVGAPPGYVG Sbjct: 598 RPIGSFLFLGPTGVGKTESAKTLARFLFDSEKNLIRIDMSEYMEKHAASRLVGAPPGYVG 657 Query: 656 YEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVI 715 YEEGG LTEAVRR+PYSV+L DE+EKAHPDVFN+LLQVLDDGRLTD +G T+DFRNT++I Sbjct: 658 YEEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNMLLQVLDDGRLTDNKGVTIDFRNTIII 717 Query: 716 MTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIA 775 +TSN+ S+ I E D ++ V + F+PEF+NR+D++++F+PLG + I SI Sbjct: 718 LTSNIASNAIMEI---SDLTEREKAVKEALKGYFKPEFLNRLDDIIIFNPLGLEQITSIV 774 Query: 776 QIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILS 835 +I K + K+++ER + + + A + +++ G+DP+YGARPLKRA+ ++IE+ LA IL Sbjct: 775 EILFKTIQKKVQERDINVTLEESAKEFIAKVGFDPIYGARPLKRALYEEIEDRLADLILQ 834 Query: 836 GELVPGKVIRLEVNEDRI 853 ++ G + I Sbjct: 835 DKIKEGSKVSFYAENGSI 852 >UniRef50_Q7AJA9 Chaperone protein clpB n=4 Tax=Chlamydiales RepID=CLPB_CHLPN Length = 866 Score = 872 bits (2252), Expect = 0.0, Method: Composition-based stats. Identities = 426/859 (49%), Positives = 575/859 (66%), Gaps = 6/859 (0%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +++ ++ AL A LA + ++ HL+ ALL ++ N G L T Sbjct: 1 MEKFSDAVSEALEKAFELAKSSKHTYVTENHLLLALLENTESLFYLVIKDIHGNPGLLNT 60 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTL 122 + AL+R P V D +PS L +L + A+ GD +IS + +LA S Sbjct: 61 AVKDALSREPTVVEGEVDPKPSPGLQTLLRDAKQEAKTLGDEYISGDHLLLAFWSSNKEP 120 Query: 123 ADILK-AAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVI 181 + K + ++ I ++R G ++ AE Q L+KY +LT A +GKLDPVI Sbjct: 121 FNSWKQTTKVSFKDLKNLITKIRRGNRMDSPSAESNFQGLEKYCKNLTALAREGKLDPVI 180 Query: 182 GRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALD 241 GRDEEIRRTIQVL RRTKNNP+LIGEPGVGKTAI EGLA R+I G+VPE LKG+++ LD Sbjct: 181 GRDEEIRRTIQVLSRRTKNNPMLIGEPGVGKTAIAEGLALRLIQGDVPESLKGKQLYVLD 240 Query: 242 MGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKP 301 MGAL+AGAKYRGEFEERLK VL D+ +G I+FIDE+HT+VGAG DGAMDA N+LKP Sbjct: 241 MGALIAGAKYRGEFEERLKSVLKDVESGDGEHIIFIDEVHTLVGAGATDGAMDAANLLKP 300 Query: 302 ALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHH 361 ALARG LHC+GATTL+EY++YIEKDAALERRFQ +FV EPS+ED + ILRGL+E+YE+ H Sbjct: 301 ALARGTLHCIGATTLNEYQKYIEKDAALERRFQPIFVTEPSLEDAVFILRGLREKYEIFH 360 Query: 362 HVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQ 421 V+IT+ A+ AA LS+RYI DR LPDKAIDLIDEAAS IRMQI S P +D +R + Sbjct: 361 GVRITEGALNAAVLLSYRYIPDRFLPDKAIDLIDEAASLIRMQIGSLPLPIDEKERELAA 420 Query: 422 LKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQ 481 L ++Q+A+ +E + ++ D + + + + + L W EK +SG + K LE Sbjct: 421 LIVKQEAIKREQSPSYQEEADAMQKSIDALREELASLRLGWDEEKKLISGLKEKKNSLES 480 Query: 482 AKIAIEQARRVGDLARMSELQYGKIPELEKQLEAAT-QLEGKTMRLLRNKVTDAEIAEVL 540 K + E+A RV D R++EL+Y IP+LE++++ L + RLL+ +V + IA+V+ Sbjct: 481 MKFSEEEAERVADYNRVAELRYSLIPQLEEEIKQDEASLNQRDNRLLQEEVDERLIAQVV 540 Query: 541 ARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGS 600 A WTGIPV +M+E E EKLL +E+ L RV+GQ AV AVS++IR +R GL DP RP+G Sbjct: 541 ANWTGIPVQKMLEGEAEKLLILEESLEERVVGQPFAVSAVSDSIRAARVGLNDPQRPLGV 600 Query: 601 FLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG 660 FLFLGPTGVGKTEL KALA+ +F+ +EAMVR DMSE+MEKHS+S+L+G+ PGYVGYEEGG Sbjct: 601 FLFLGPTGVGKTELAKALADLLFNKEEAMVRFDMSEYMEKHSISKLIGSSPGYVGYEEGG 660 Query: 661 YLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL 720 L+EA+RRRPYSV+L DE+EKA +V NILLQV DDG LTDG+ R V+ +N + IMTSN+ Sbjct: 661 SLSEALRRRPYSVVLFDEIEKADKEVLNILLQVFDDGILTDGKKRKVNCKNALFIMTSNI 720 Query: 721 GSDLIQERFGELDYAHMKELVL----GVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQ 776 GS + + + KE +L V+ PEF+NRIDE++ F PL ++ I I Sbjct: 721 GSPELADYCSKKGSELTKEAILSVVSPVLKRYLSPEFMNRIDEILPFVPLTKEDIVKIVG 780 Query: 777 IQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSG 836 IQ++R+ +RL+ R + D + LSE GYD +GARPLKR IQQ++ L++ +L G Sbjct: 781 IQMRRIAQRLKARRINLSWDDSVILFLSEQGYDSAFGARPLKRLIQQKVVILLSKALLKG 840 Query: 837 ELVPGKVIRLEVNEDRIVA 855 ++ P I L + ++ +V Sbjct: 841 DIKPDTSIELTMAKEVLVF 859 >UniRef50_C0GVK9 ATPase AAA-2 domain protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GVK9_9DELT Length = 873 Score = 869 bits (2244), Expect = 0.0, Method: Composition-based stats. Identities = 421/858 (49%), Positives = 594/858 (69%), Gaps = 5/858 (0%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M +D+ K Q + + LA+ ++Q + P HLMS+LLN L +G + +L Sbjct: 1 MLIDKFNLKSQELIESSSRLAVKKEHQHVTPWHLMSSLLNIGKNPTLTALQESGADLDKL 60 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG 120 ++ +L P+ + S+DL R+ ++A+K + +I +LAALE + Sbjct: 61 GGRVSTSLLAQPKALASAQQTPISRDLERLFINAQEIAEKAEEKYIGINHILLAALEIQE 120 Query: 121 TLADILKAAGATTANITQAIEQMRGGESVNDQGAE-DQRQALKKYTIDLTERAEQGKLDP 179 LA L+ AGA +T A++Q+R + A D + L +YT DLTE A QG+LDP Sbjct: 121 -LAGALEEAGADREKLTLALQQVRSVDGPGQGKAPGDDFEYLAQYTKDLTESARQGELDP 179 Query: 180 VIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLA 239 VIGR+EEIR Q+L RR KNNP++IGEPGVGKTA+VEGLAQRI+NG+VPE L+ +LA Sbjct: 180 VIGREEEIRMASQILSRRLKNNPIIIGEPGVGKTAVVEGLAQRIVNGDVPESLQDVSILA 239 Query: 240 LDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNML 299 LD+G L+AGAKYRGEFEER K VL ++ GN+I FIDE+H +VGAG ++G MDA N++ Sbjct: 240 LDLGQLIAGAKYRGEFEERFKRVLQEITDA-GNIITFIDEIHMLVGAGGSEGTMDAANLI 298 Query: 300 KPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYEL 359 KPAL+RG++ CVGATT +EYR++IEKD+AL RRFQ V V EP + T+AILRG+K +YE Sbjct: 299 KPALSRGDIRCVGATTSEEYRKHIEKDSALMRRFQTVTVEEPDHDKTLAILRGIKGKYET 358 Query: 360 HHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRI 419 HH + I+D ++ A+A LS RYI+DR LPDKAIDL+D+A +++R+ + SKPE++D++D++I Sbjct: 359 HHGIHISDSSLGASAKLSQRYISDRFLPDKAIDLMDQAGAALRISLASKPEDIDKIDQQI 418 Query: 420 IQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAEL 479 ++L++E AL E+D S +RL+++ L+D + Q + E W+ +K + + L Sbjct: 419 VELEIEAGALQGETDRLSMQRLEVVQNTLADLKEQSRTMTEAWEQQKEAAETLAKARKTL 478 Query: 480 EQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRL--LRNKVTDAEIA 537 + AK +EQ R D +R++ELQY IPE E+ L + + +IA Sbjct: 479 DDAKKELEQKVRQEDFSRVAELQYKIIPEAEQVLAEYENFDADQEPENGSPRALLPQDIA 538 Query: 538 EVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRP 597 ++RWTGIPVS++ME E+E+ L++E L RV+GQ++ ++ +S A+RRSRAG+ DPNRP Sbjct: 539 ACVSRWTGIPVSKLMEEEKERWLQLEDYLRKRVVGQDQVLETISKAVRRSRAGVQDPNRP 598 Query: 598 IGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYE 657 +GSFL LGPTGVGKTE+ KALA F+FD + ++VRIDMSEFMEKHSV+RL GAPPGYVGYE Sbjct: 599 LGSFLMLGPTGVGKTEMAKALAEFLFDDERSLVRIDMSEFMEKHSVARLTGAPPGYVGYE 658 Query: 658 EGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMT 717 EGG LT +RRRPYSV+L DEVEKAHPD FN+ LQVLDDGRLTDGQGRT F NTV++MT Sbjct: 659 EGGVLTNKIRRRPYSVVLFDEVEKAHPDAFNLFLQVLDDGRLTDGQGRTTHFYNTVILMT 718 Query: 718 SNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQI 777 SNLG++ I+ E + M+ ++ VV FRPEF+NR+D++++ +PL + + I I Sbjct: 719 SNLGAETIEPAETEEEVQKMRSTLMDVVRGFFRPEFLNRLDDILICNPLTPEVMPPIVDI 778 Query: 778 QLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGE 837 QLKRL K L +RG E+ ISDEA LL+++G++P+YGARPLKRAIQ +++PLA+ ++ Sbjct: 779 QLKRLNKLLADRGIEMDISDEAKHLLAQDGFNPLYGARPLKRAIQTSLQDPLAEMLIKEG 838 Query: 838 LVPGKVIRLEVNEDRIVA 855 + G I ++V + R+ Sbjct: 839 MDEGGSINVDVEDGRLTI 856 >UniRef50_Q4FXS7 Serine peptidase, putative n=12 Tax=cellular organisms RepID=Q4FXS7_LEIMA Length = 867 Score = 860 bits (2223), Expect = 0.0, Method: Composition-based stats. Identities = 410/848 (48%), Positives = 594/848 (70%), Gaps = 5/848 (0%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 T +A +LA N +++P+HL + E S ++ G A ++ + Sbjct: 8 WTQAASDLMARMAALARKKANGYLDPVHLAYVMFEDENSLASRVVRKLG--AASVKDGLE 65 Query: 66 QALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADI 125 ++ +P +P+ D++RV+N ++ GD ++++ F+LA ES+ + I Sbjct: 66 ARVDAIPTQMPAPTQPRPNSDMMRVMNTAEQERAALGDTLMAADHFLLALHESKE-VGRI 124 Query: 126 LKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDE 185 L AAGA I + +MR G+ + +D ++L KY +DL ++AE GKLDPVIGR + Sbjct: 125 LDAAGAGKKAIRATLLEMRKGKKITSDFQDDNYESLNKYAVDLCKQAEDGKLDPVIGRAD 184 Query: 186 EIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGAL 245 EI RTI+VL RRTKNNPVLIGEPGVGKTAIVEG+AQ+++ G+VP+ L G R+ +LDMGAL Sbjct: 185 EILRTIRVLSRRTKNNPVLIGEPGVGKTAIVEGIAQQVVRGDVPDTLSGIRIFSLDMGAL 244 Query: 246 VAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALAR 305 +AGAKYRGEFEERLK VLN++ + + +ILFIDE+H ++GAGK+DGAMDA N+LKP LAR Sbjct: 245 IAGAKYRGEFEERLKAVLNEVKESDNKIILFIDEIHLVLGAGKSDGAMDAANLLKPLLAR 304 Query: 306 GELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQI 365 GEL +GATTL+EYRQY+EKDAA ERRF V V EPSVE+ +ILRGLK+RYE HH VQI Sbjct: 305 GELRTIGATTLEEYRQYVEKDAAFERRFMPVQVHEPSVEECTSILRGLKDRYEQHHGVQI 364 Query: 366 TDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLE 425 TD A+V AA L+ RYI +R LPDKAIDLIDEA +++R+ + S+P E+D L+R+ QL++E Sbjct: 365 TDKAVVVAAQLAGRYITNRFLPDKAIDLIDEACANVRVTLSSRPAEIDALERKKRQLEIE 424 Query: 426 QQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIA 485 ++AL ++ D ++K+RL + E+ E + L +++ E+ + Q +A+L++ K+ Sbjct: 425 ERALQRDKDASAKERLKAVKAEIQKVEEKLGPLLAKYEQERGRIDELQATQAKLDEKKVK 484 Query: 486 IEQARRVGDLARMSELQYGKIPELEKQLEAATQ-LEGKTMRLLRNKVTDAEIAEVLARWT 544 +E+A R+ D+ ++L+Y IP L+ ++ + + +E + +L+ VT+ +IA V++RWT Sbjct: 485 LERAERMRDMETAADLKYNVIPILQDRIRSLKEAIEKQKATMLQGTVTETDIATVVSRWT 544 Query: 545 GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFL 604 IPV+++ ++ERE+LL + +LH RV GQ+EAV V+ AI RSRAGLA +RP GSFLFL Sbjct: 545 NIPVTKLSQTERERLLHLADQLHLRVKGQDEAVSRVAEAILRSRAGLARSDRPTGSFLFL 604 Query: 605 GPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTE 664 GPTGVGKTEL KA+A+ +FD + MVR+DMSE+ME+HSV+RL+GAPPGYVG+EEGG LTE Sbjct: 605 GPTGVGKTELSKAVASELFDDAKYMVRLDMSEYMEQHSVARLIGAPPGYVGHEEGGQLTE 664 Query: 665 AVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDL 724 VRRRPY+V+LLDEVEKAHP+VFN+LLQVLDDGRLTD GRTVDF NT++IMTSNLG+ Sbjct: 665 PVRRRPYTVVLLDEVEKAHPNVFNVLLQVLDDGRLTDSHGRTVDFCNTIIIMTSNLGAQY 724 Query: 725 IQE-RFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLY 783 +Q Y + V+G V FRPEFINR+D++++F LG + + I + + L Sbjct: 725 LQNMDTSPKAYEVAQAQVMGEVRKFFRPEFINRLDDIILFRSLGLKEMTGIIDLITEELN 784 Query: 784 KRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKV 843 RL+++ + +++EA + + E+ +D GARPL+R +++ I L++ I+S EL P Sbjct: 785 GRLKDQSIRVSLTEEAKQYVLESAFDADMGARPLRRWVEKNITTELSRMIISQELSPNST 844 Query: 844 IRLEVNED 851 +++ ++ + Sbjct: 845 VKVTLSSN 852 >UniRef50_C9RKR5 ATPase AAA-2 domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKR5_FIBSS Length = 855 Score = 858 bits (2218), Expect = 0.0, Method: Composition-based stats. Identities = 427/861 (49%), Positives = 587/861 (68%), Gaps = 15/861 (1%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 + TN + LA AQSL + ++ HL L+ ++ L S G+ +LR Sbjct: 1 MSDFTNDAEKVLAKAQSLRDRCSHSYLGAAHLAVGLVEGPDATLKKLYKSKGVKPNELRG 60 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALE--SRG 120 + + ++P++EG DV+P DL R+L + A++ ++ ++A ++ Sbjct: 61 RLEPFVQKIPRMEGVNPDVEPDSDLNRILRAAVQAARQVSR-MVTPGDLLVALMKFSGDR 119 Query: 121 TLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPV 180 LA + + A +T + + G +++ LK Y +L E A GKL PV Sbjct: 120 GLAKVFEDALGSTEVVETWLSDPFAGA-----ANAEEQSPLKLYGRELVEMAADGKLSPV 174 Query: 181 IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL 240 IGR+EEIRR I +L R+TKNNP L+GEPGVGKTAIVEGLA+RI G+VP+ LKG++V AL Sbjct: 175 IGREEEIRRVILILSRKTKNNPCLVGEPGVGKTAIVEGLAERIYRGDVPDALKGKKVFAL 234 Query: 241 DMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLK 300 D+ AL+AGAKYRG+FEERLK V++ + +++GN ++FIDELH +VGAGK +G+MD GNMLK Sbjct: 235 DLSALMAGAKYRGDFEERLKSVIDAI-EEDGNTLMFIDELHNIVGAGKTEGSMDLGNMLK 293 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELH 360 P LARGELHC+GATT EYR+YIEKD+ALERRFQ V V+EPS ++ I+ILRG+K+ ++ H Sbjct: 294 PKLARGELHCIGATTTQEYRKYIEKDSALERRFQPVQVSEPSEDEAISILRGIKDGFDAH 353 Query: 361 HHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRII 420 H V++ D A+VAA LS+RYI+DR LPDKAIDLIDEAAS ++ Q+D+ PE LD L R+ + Sbjct: 354 HGVRLHDNALVAAVKLSNRYISDRFLPDKAIDLIDEAASLVKTQMDTVPEALDTLQRKEL 413 Query: 421 QLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELE 480 Q+K+E+QAL KE+DEAS KRL L E+L+ + +++E W+ +A+ + Q +K L+ Sbjct: 414 QMKIEEQALSKETDEASVKRLKELREDLAVTDAAVKQMQERWQDRRAAFAEVQDLKKALK 473 Query: 481 QAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRL--LRNKVTDAEIAE 538 AK +EQA DL R +EL+Y KI +EK+L T+ K+ L +VT+ IA Sbjct: 474 AAKDEMEQAEARYDLNRAAELKYNKIVNIEKELAQKTEALRKSAEEGGLSEEVTEETIAL 533 Query: 539 VLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPI 598 V++RWTGIPV+++ E E+ KLL +++ LH RVIGQ+EAV+AVS AI R+R+GL+ N PI Sbjct: 534 VVSRWTGIPVTKLCEGEKAKLLHLDERLHARVIGQDEAVEAVSEAILRNRSGLSRENAPI 593 Query: 599 GSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEE 658 GSFLFLGPTGVGKTEL KALA +FDS+ A+VRIDMSE+MEKHSVSRL+GAPPGYVGYEE Sbjct: 594 GSFLFLGPTGVGKTELAKALAVELFDSENALVRIDMSEYMEKHSVSRLIGAPPGYVGYEE 653 Query: 659 GGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTS 718 GG LTEAVR PY VILLDE+EKAHPDVFN LLQVLDDGRLTDG+GRTV+F+NT+++MTS Sbjct: 654 GGQLTEAVRTHPYCVILLDEIEKAHPDVFNTLLQVLDDGRLTDGKGRTVNFKNTLILMTS 713 Query: 719 NLGSDLIQERFGELDYAHMKELVLGVVS----HNFRPEFINRIDEVVVFHPLGEQHIASI 774 NLG++ + ++ L V FRPEF+NR+DEV+VF L ++ I I Sbjct: 714 NLGAEKFRLSAANAKNGEPPQVALADVEADLHAFFRPEFLNRLDEVLVFQSLSKKQIREI 773 Query: 775 AQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQIL 834 +++ L R + + +SD AL ++E Y P +GARP++R I++ IE PL+ IL Sbjct: 774 VKLKFADLANRAARQDLVLTLSDAALDAIAEGAYQPEFGARPIQRYIERNIERPLSHAIL 833 Query: 835 SGELVPGKVIRLEVNEDRIVA 855 SG + K ++ + V Sbjct: 834 SGTVSAAKPAVVDYKDGMFVV 854 >UniRef50_Q10YU4 ATPase AAA-2 n=7 Tax=Bacteria RepID=Q10YU4_TRIEI Length = 905 Score = 858 bits (2218), Expect = 0.0, Method: Composition-based stats. Identities = 456/892 (51%), Positives = 627/892 (70%), Gaps = 40/892 (4%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 + T + A+ +Q +A + NQ +E HL+ ALL Q+ G+ + +L+ +GI +L Sbjct: 5 DPSKFTEQAWDAIVKSQDVAKRYQNQQLEVEHLIIALLEQQ-GTANKILSRSGIEPEKLL 63 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGT 121 ++ + R P+V G+ + Q L L+L D+ +K D FI+ E F+LA E + Sbjct: 64 QQVDAFVRRQPKV-GSIEHLYLGQGLETFLDLADQAKEKWEDKFIAVEHFLLAFHEDKRL 122 Query: 122 LADIL-----------------KAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKY 164 ++ + I+ RG V DQ E AL KY Sbjct: 123 GNKLIGGGTPQLPTRPGFAPPQTTLQIEFKELEATIKAFRGSSKVEDQNPEATYDALAKY 182 Query: 165 TIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRII 224 DLTE A+ GKLDPVIGRDEE+RR + L RRTKNNPVLIGEPGVGKTAI EGLAQRI+ Sbjct: 183 GRDLTELAKVGKLDPVIGRDEEVRRVVSCLSRRTKNNPVLIGEPGVGKTAIAEGLAQRIV 242 Query: 225 NGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMV 284 NG+VPE LK R++++LDMG+L+AGAK+RGEFEERL+ VL ++ +G ++LFIDELHT+V Sbjct: 243 NGDVPESLKERQLISLDMGSLIAGAKFRGEFEERLRSVLREVTHSDGQIVLFIDELHTVV 302 Query: 285 GAGKADGAM---DAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEP 341 GAG G DAGN+LKP LARGEL C+GATT+DEYR++IEKDAALERRFQKV V +P Sbjct: 303 GAGSGGGNSSGVDAGNLLKPMLARGELRCIGATTIDEYRKHIEKDAALERRFQKVEVGQP 362 Query: 342 SVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSI 401 SVEDTI+ILRGLK+RYE HH V+ITD A+VAAATLS+RYI+DR LPDKAIDL+DEAA+ + Sbjct: 363 SVEDTISILRGLKDRYETHHGVKITDAALVAAATLSNRYISDRFLPDKAIDLVDEAAAQL 422 Query: 402 RMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRL-------------DMLNEEL 448 +M+I SKP EL+ +DRRI+QL++E+ ++ E +K++ + + E+ Sbjct: 423 KMEITSKPVELEAIDRRIMQLEMEKLSIEGELSGTNKEKNSEAILSTKVSPALERITNEI 482 Query: 449 SDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPE 508 + +++ + +W EK L+ ++KAE ++ K+ IEQA R DL ++L+YG++ Sbjct: 483 NSLKQKQEKFSSQWSGEKELLNSINSLKAEEDKIKVQIEQAERAYDLNTAAQLKYGQLET 542 Query: 509 LEKQLEAAT----QLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQ 564 + + EA +++ + LLR +VTD +IA ++A+WTGIPV+R++ESER+KLL++E+ Sbjct: 543 VHRDREAQEAELLKVQAQGSFLLREQVTDGDIATIVAKWTGIPVNRLLESERQKLLQLEK 602 Query: 565 ELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFD 624 LH RVIGQ+EAV AV+ AIRR+RAG+ DP RPIGSF+FLGPTGVGKTEL +ALA F+FD Sbjct: 603 HLHQRVIGQSEAVAAVAAAIRRARAGMKDPGRPIGSFMFLGPTGVGKTELARALAGFLFD 662 Query: 625 SDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHP 684 D+A+VR+DMSE+MEKH+V+RLVGAPPGYVGY++GG L+EAVRR PYS++L DEVEKAHP Sbjct: 663 RDDALVRVDMSEYMEKHAVARLVGAPPGYVGYDQGGQLSEAVRRHPYSLVLFDEVEKAHP 722 Query: 685 DVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFG-ELDYAHMKELVLG 743 DVFNILLQVLDDGR+TD QGR +DF NTV++MTSN+GS+ I + G + Y M + V+G Sbjct: 723 DVFNILLQVLDDGRITDSQGRVIDFSNTVIVMTSNIGSEYILDVAGDDSKYEEMYKRVMG 782 Query: 744 VVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLL 803 + +FRPEF+NR+DE+++FH L + + I +IQ+KR+ + L E+ + ++D L + Sbjct: 783 ALRKHFRPEFLNRVDEIILFHTLRKSELRQIVEIQVKRIERLLGEQKISLQLTDATLDHI 842 Query: 804 SENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855 +E GYDPVYGARPLKRAIQ+++ENPLA QIL V G V+ ++ + +V Sbjct: 843 TEVGYDPVYGARPLKRAIQRELENPLANQILENRFVCGDVVIIDFVDSGLVF 894 >UniRef50_D1B2U8 ATPase AAA-2 domain protein n=4 Tax=Bacteria RepID=D1B2U8_SULD5 Length = 856 Score = 858 bits (2217), Expect = 0.0, Method: Composition-based stats. Identities = 410/857 (47%), Positives = 599/857 (69%), Gaps = 11/857 (1%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 ++LTN+ + A+ A SLAL N PLH+ L+ ++ + I+ + Sbjct: 5 FEQLTNQMREAIESAISLALHSKNNEATPLHVTWGLITNSASILNQVFNKMNIDKSAIEL 64 Query: 63 DINQALNRLPQVEGTG-GDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGT 121 ++ + +LP ++ S+ LV L + L +++GD+++S + ++LA +E+ Sbjct: 65 EVKSEVQKLPTASHVSKENISLSRTLVESLQKAEGLMKQKGDSYLSVDTWLLANIENEPL 124 Query: 122 LADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVI 181 + K + +E +RGG+ ++ Q A++ ++L+KY I+LT+ A +GKLDPVI Sbjct: 125 KKILGKY--LDLLAFKKNLEALRGGKKIDKQSADENLESLEKYGINLTKLASEGKLDPVI 182 Query: 182 GRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALD 241 GRDEEI+R +Q+L R+TKNNP+LIGEPG GKTAI EGLA RI + +VP L+ + V+ALD Sbjct: 183 GRDEEIQRMMQILIRKTKNNPILIGEPGTGKTAIAEGLALRIAHNDVPLSLQNKSVVALD 242 Query: 242 MGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKP 301 M AL+AGAKYRGEFE+RLK V++++ K GNVILFIDE+HT+VGAG ++G+MDA N+LKP Sbjct: 243 MSALIAGAKYRGEFEDRLKAVIDEVKKS-GNVILFIDEIHTIVGAGASEGSMDAANILKP 301 Query: 302 ALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHH 361 ALARGELH +GATTL EYR+Y EKDAAL+RRFQ V V EPS+ + + ILRG+KE E HH Sbjct: 302 ALARGELHTIGATTLREYRKYFEKDAALQRRFQPVTVNEPSINEALQILRGIKEHLEAHH 361 Query: 362 HVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQ 421 +V I D A++AAA LS RYI+DR LPDKAIDLIDEAA+ ++MQI+S+P EL R+ R I Sbjct: 362 NVSIQDSALIAAAKLSSRYISDRFLPDKAIDLIDEAAAELKMQIESEPTELSRIKRAIST 421 Query: 422 LKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQ 481 L +E++AL+ E ++ + +RL + +EL D + + LE +++ EK + IK++ E Sbjct: 422 LMVEKEALLMEKNKKNDERLSAIEKELGDAKEKMRSLETQFENEKQVFNDIAAIKSQAEA 481 Query: 482 AKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEG---KTMRLLRNKVTDAEIAE 538 + E A++ + + +E++YGK+PEL K+ E ++ LL+N V + IA Sbjct: 482 LRREAEIAKKQSEFNKAAEIEYGKLPELLKKEEELKLKWEKMVESGTLLKNSVDEEMIAT 541 Query: 539 VLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPI 598 ++++WTGIPV++M++SE+ K+L +E+ L V+GQ+ A+ A+ AI+R++AGL++ N+PI Sbjct: 542 IVSKWTGIPVNKMLQSEKAKVLHVEEYLKKEVVGQDAAIKAIGRAIKRNKAGLSEQNKPI 601 Query: 599 GSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEE 658 GSFLFLGPTGVGKT+ KALANF+FD+ +A++R DMSE+MEKHSVSRLVGAPPGYVGY+E Sbjct: 602 GSFLFLGPTGVGKTQSAKALANFLFDTTKALIRFDMSEYMEKHSVSRLVGAPPGYVGYDE 661 Query: 659 GGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTS 718 GG LTEAVRR+PYSV+L DE+EKAHPDVFNILLQVLD+GRLTD +G TVDF+NT++I+TS Sbjct: 662 GGQLTEAVRRKPYSVVLFDEIEKAHPDVFNILLQVLDEGRLTDNKGVTVDFKNTIIILTS 721 Query: 719 NLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQ 778 N+ S I E GE + + + +F+PEF+NR+D++++F+PL E + I I Sbjct: 722 NIASSKIMEFEGEKRTEEV----MKELRMHFKPEFLNRLDDIIIFNPLSEDGLREIVTIM 777 Query: 779 LKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGEL 838 + K+L + + ++ A L++E G+DPVYGARPLKRA+ + +E+ LA+ IL +L Sbjct: 778 FGDIEKKLAHKEIKAELTTTAKSLIAEAGFDPVYGARPLKRALYELVEDKLAELILEDKL 837 Query: 839 VPGKVIRLEVNEDRIVA 855 G+ I ++ +IV Sbjct: 838 HEGEGIVIDAENGKIVI 854 >UniRef50_B5Y5I5 Predicted protein n=4 Tax=cellular organisms RepID=B5Y5I5_PHATR Length = 997 Score = 858 bits (2216), Expect = 0.0, Method: Composition-based stats. Identities = 430/882 (48%), Positives = 604/882 (68%), Gaps = 33/882 (3%) Query: 4 DRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQ------EGGSVSP-----LLTS 52 D+ T ++A ++ + E ++ +LN E + +L Sbjct: 89 DKYTEAAWSSIAGLTKVSDYYSASTFEAPFVLEFMLNPNKHNGGEDADAAKRVVEKILNK 148 Query: 53 AGINAGQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFV 112 AG+N +LR ++++ L + P+V + + L +VL Q GD+++S+E V Sbjct: 149 AGVNLNRLRCELDEYLAKQPRVSDPTNKIM-GRTLQKVLETARNGKQALGDSYVSTEGLV 207 Query: 113 LAAL-ESRGTLADILKAAGATTANITQAIEQMRG-GESVNDQGAEDQRQALKKYTIDLTE 170 LA + E + L ++ + +++MR + AE AL KY +DLTE Sbjct: 208 LAMVKEDDKFTREALMRQNVKYTDVLEVVKEMRKKSGPAISRSAESMYDALTKYGVDLTE 267 Query: 171 RAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPE 230 RAEQGKLDPVIGRD+EIRR IQ+L RRTKNNPVLIG+PGVGKTAI EG+AQR+I+G+VP+ Sbjct: 268 RAEQGKLDPVIGRDDEIRRAIQILSRRTKNNPVLIGDPGVGKTAIAEGIAQRMIDGDVPD 327 Query: 231 GLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKAD 290 LK R++ LDMGALVAGA RG+FEERLK V+ ++ + +G +ILFIDE+HT+VGAG A Sbjct: 328 SLKNCRLIGLDMGALVAGASMRGQFEERLKAVVEEVTQSDGEIILFIDEMHTVVGAGAAQ 387 Query: 291 GAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAIL 350 G+MDA N+LKPALARG+L C+GATT++EYR+YIEKD ALERRFQ+V + +P+ EDT++IL Sbjct: 388 GSMDASNLLKPALARGQLRCIGATTINEYRKYIEKDKALERRFQQVMIDQPTPEDTVSIL 447 Query: 351 RGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPE 410 RGLK RYELHH V+I D A++AAA LSHRYI DR LPDKAIDL+DEA + + +I SKP Sbjct: 448 RGLKPRYELHHGVRIRDEALLAAAKLSHRYIPDRFLPDKAIDLVDEACAKLNNEITSKPT 507 Query: 411 ELDRLDRRIIQLKLEQQALMKESDE-----------ASKKRLDMLNEELSDKERQYSELE 459 LD +DRRIIQL++E+ +L + ++ + RL ++EEL + + EL Sbjct: 508 ILDEIDRRIIQLEMERLSLQSDFEKYEEDGNTFKATSENFRLAKIDEELGSLKYEQQELN 567 Query: 460 EEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQL 519 +W AEK ++ + +K ++ + K+ IE+ R DL + +EL+Y +P LE++LE + Sbjct: 568 MKWMAEKGAVDRLKDVKEKIAKVKLDIEKFEREFDLNKAAELKYSDLPPLERELEELENI 627 Query: 520 EG-----KTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574 R+LR++V +IA V+A WTGIP +++ESER+++L M +L R+IGQ+ Sbjct: 628 GQYDLGPGEERMLRDEVVADDIAGVVAVWTGIPPGKLLESERDRILTMGDKLRERLIGQD 687 Query: 575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 634 EA+ V+ A++RSRAGL DP++PI S +FLGPTGVGKTE KALA FMFDS++A++RIDM Sbjct: 688 EAIRVVTEAVQRSRAGLNDPSKPIASLIFLGPTGVGKTECAKALAEFMFDSEDALIRIDM 747 Query: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694 SE+MEKH+VSRL+GAPPGYVGY+EGG LT+A+RRRPY+V+L DE+EKAHPDVFN++LQ+L Sbjct: 748 SEYMEKHTVSRLLGAPPGYVGYDEGGQLTDAIRRRPYAVLLFDEMEKAHPDVFNVMLQLL 807 Query: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGEL---DYAHMKELVLGVVSHNFRP 751 DDGRLTD +G TV+FRNT+ I TSN+GS I + G D M+ V + FRP Sbjct: 808 DDGRLTDSKGNTVNFRNTICIFTSNVGSQEILDLNGSSEIGDQEIMRSRVTEAMRERFRP 867 Query: 752 EFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPV 811 EF+NRIDE V+F+ L + ++ I ++++RL KRLEE+ + + +EAL L+E G+DPV Sbjct: 868 EFLNRIDEHVIFNSLNKNNLRGIVVLEVRRLEKRLEEKQMRLVLREEALDFLAEVGFDPV 927 Query: 812 YGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRI 853 YGARPLKR IQ+++E +A+ IL GE V G I ++V +R+ Sbjct: 928 YGARPLKRTIQRELETVVARGILGGEFVDGDTILVDVVNERL 969 >UniRef50_Q822Q4 Chaperone protein clpB n=11 Tax=cellular organisms RepID=CLPB_CHLCV Length = 864 Score = 856 bits (2211), Expect = 0.0, Method: Composition-based stats. Identities = 419/855 (49%), Positives = 574/855 (67%), Gaps = 6/855 (0%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +D++++ AL A LA N ++ H + LL ++ N L + Sbjct: 1 MDKISDAVSEALEKAFELAQSAKNPYVSENHFLKCLLENTESLFYLIIKDIHNNPKLLTS 60 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES-RGT 121 +++AL+ P V +PS L +L + A+ GD ++S + +LA +S + Sbjct: 61 AVDEALSLEPSVIEGSAMPKPSPGLQSLLLDAKQEAKDLGDEYLSGDHVLLAFWKSNKEP 120 Query: 122 LADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVI 181 A K + ++ + I +R G ++ AE+ + L+KY +LT A++GKLDPVI Sbjct: 121 FASWKKTVKISLDDLKKLIINIRRGNRMDSPSAENNLRGLEKYCKNLTLLAKEGKLDPVI 180 Query: 182 GRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALD 241 GRDEEIRRT+QVL RRTKNNP+LIGEPGVGKTAI EGLA RI+ G++PE LKG+++ LD Sbjct: 181 GRDEEIRRTVQVLSRRTKNNPMLIGEPGVGKTAIAEGLALRIVQGDIPESLKGKQLYVLD 240 Query: 242 MGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKP 301 MGAL+AGAKYRGEFEERLK VL D+ +G ILFIDE+HT+VGAG DGAMDA N+LKP Sbjct: 241 MGALIAGAKYRGEFEERLKSVLKDVESVDGESILFIDEVHTLVGAGATDGAMDAANLLKP 300 Query: 302 ALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHH 361 ALARG LHC+GATTL+EY++YIEKDAALERRFQ +FV EPS+ED + ILRGL+E+YE+ H Sbjct: 301 ALARGTLHCIGATTLNEYQKYIEKDAALERRFQPIFVTEPSLEDAVFILRGLREKYEIFH 360 Query: 362 HVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQ 421 V+IT+ A+ AA LS+RYI DR LPDKAIDLIDEAAS IRMQI S P +D +R + Sbjct: 361 GVRITEGALNAAVLLSYRYIPDRFLPDKAIDLIDEAASLIRMQIGSLPLPIDEKERELAA 420 Query: 422 LKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQ 481 L ++Q+A+ +E + ++ + + + + + + L W EK ++G + K LE Sbjct: 421 LIVKQEAIKREKAPSYQEEAAAMQQSIEQLKEELAALRLRWDEEKKLITGLKEKKNSLEN 480 Query: 482 AKIAIEQARRVGDLARMSELQYGKIPEL-EKQLEAATQLEGKTMRLLRNKVTDAEIAEVL 540 K + E+A RV D R++EL+Y IP L E+ E L + RLL+ +V + IA+V+ Sbjct: 481 MKFSEEEAERVADYNRVAELRYSLIPALEEEIREDEEALNQRDNRLLQEEVDERLIAQVV 540 Query: 541 ARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGS 600 A WTGIP+ +M+E E EKLL +E+ L RV+GQ A+ AVS++IR +R GL+DP RP+G Sbjct: 541 ANWTGIPIQKMLEGEAEKLLVLEESLEERVVGQPFAISAVSDSIRAARVGLSDPQRPLGV 600 Query: 601 FLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG 660 FLFLGPTGVGKTEL KALA+ +F+ +EAMVR DM+E+MEKHSVS+L+G+PPGYVGYEEGG Sbjct: 601 FLFLGPTGVGKTELAKALADLLFNKEEAMVRFDMTEYMEKHSVSKLIGSPPGYVGYEEGG 660 Query: 661 YLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL 720 L+EA+RRRPYSV+L DE+EKA +VFNILLQ+ D+G LTD + R V+ +N + IMTSN+ Sbjct: 661 SLSEALRRRPYSVVLFDEIEKADKEVFNILLQIFDEGILTDSKKRKVNCKNALFIMTSNI 720 Query: 721 GSDLIQERFGELDYAHMKELVLGVV----SHNFRPEFINRIDEVVVFHPLGEQHIASIAQ 776 GS + + + KE VL VV F PEFINRID+++ F PL + I I Sbjct: 721 GSQELADYCAKKGSRVSKETVLSVVAPTLKKYFSPEFINRIDDILPFVPLNTEDIVKIVG 780 Query: 777 IQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSG 836 IQ++R+ +RL ER + D + LSE GYD +GARPLKR IQQ++ L++ +L G Sbjct: 781 IQMRRVAQRLLERRVTLTWDDSVILYLSEQGYDSSFGARPLKRLIQQKVVTLLSKALLKG 840 Query: 837 ELVPGKVIRLEVNED 851 ++ I L +++D Sbjct: 841 DIKSDTSIELTMSKD 855 >UniRef50_Q9ZMH1 Chaperone protein clpB n=85 Tax=Bacteria RepID=CLPB_HELPJ Length = 856 Score = 842 bits (2174), Expect = 0.0, Method: Composition-based stats. Identities = 413/859 (48%), Positives = 602/859 (70%), Gaps = 12/859 (1%) Query: 1 MR-LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQ 59 M +++T++ L A +LAL H N + P+H++ A+LN G + L ++ Sbjct: 1 MNLFEKMTDQLHETLDSAIALALHHKNAEVTPMHMLFAMLNNSQGILIQALQKMPVDIEA 60 Query: 60 LRTDINQALNRLPQVEG-TGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES 118 L+ + LN+ +V + ++Q +Q L++ L L KRGD+FI+++ ++LA + Sbjct: 61 LKLSVQSELNKFAKVSQISKQNIQLNQALIQSLENAQGLMAKRGDSFIATDAYLLANM-- 118 Query: 119 RGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLD 178 +LK T + + +E +R G ++ D+ + ++L+K+ IDLT++A + KLD Sbjct: 119 -NLFESVLKPY-LDTKELQKTLESLRKGRTIQDKNDDSNLESLEKFGIDLTQKALENKLD 176 Query: 179 PVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVL 238 PVIGRDEEI R +Q+L R+TKNNP+L+GEPGVGKTA+VEGLAQRI+N EVP+ L +RV+ Sbjct: 177 PVIGRDEEIIRMMQILIRKTKNNPILLGEPGVGKTAVVEGLAQRIVNKEVPKTLLNKRVV 236 Query: 239 ALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNM 298 ALD+ LVAGAKYRGEFEERLK V+ ++ K NVILFIDE+HT+VGAG ++G MDA N+ Sbjct: 237 ALDLSLLVAGAKYRGEFEERLKKVIEEVKKS-ANVILFIDEIHTIVGAGASEGGMDAANI 295 Query: 299 LKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYE 358 LKPALARGELH +GATTL EYR+Y EKD AL+RRFQ + + EPS+ + + ILRGLKE E Sbjct: 296 LKPALARGELHTIGATTLKEYRKYFEKDMALQRRFQPILLNEPSINEALQILRGLKETLE 355 Query: 359 LHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418 HH++ I D A++A+A LS RYI DR LPDKAIDLIDE A+ ++MQ++S+P +L + R Sbjct: 356 THHNITINDSALIASAKLSSRYITDRFLPDKAIDLIDEGAAQLKMQMESEPAKLSSVKRS 415 Query: 419 IIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAE 478 I +L++E+QAL E+ E++ KR+ + +ELSD + + +LE +++ EK +K E Sbjct: 416 IQRLEMEKQALEMENKESNHKRMQEILKELSDLKEEKIQLEAQFENEKEVFKEISRLKME 475 Query: 479 LEQAKIAIEQARRVGDLARMSELQYGKIPELEKQ---LEAATQLEGKTMRLLRNKVTDAE 535 +E K E+ +R GD + +E++Y KIPE EK+ L+ + + LL+N +T+ Sbjct: 476 MEGLKKEAERFKRNGDYQQAAEIEYSKIPEKEKKEKELQHKWETMQQNGALLQNALTENN 535 Query: 536 IAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPN 595 IAE++++WT IPV +M++SE+ ++L +E EL RV+GQ +A+ A++ AI+R++AGL+D N Sbjct: 536 IAEIVSQWTHIPVQKMLQSEKNRVLNIESELQKRVVGQEKALKAIAKAIKRNKAGLSDSN 595 Query: 596 RPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVG 655 +PIGSFLFLGPTGVGKTE KALA F+FDSD+ ++RIDMSE+MEKH++SRL+GA PGYVG Sbjct: 596 KPIGSFLFLGPTGVGKTESAKALAQFLFDSDKNLIRIDMSEYMEKHAISRLIGAAPGYVG 655 Query: 656 YEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVI 715 YEEGG LTEAVRR+PYSV+LLDEVEKAHPDVFN+LLQVLD+G LTD +G VDF+NT++I Sbjct: 656 YEEGGQLTEAVRRKPYSVVLLDEVEKAHPDVFNLLLQVLDEGHLTDSKGVRVDFKNTILI 715 Query: 716 MTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIA 775 +TSN+ S + E +L A ++ + + F+PEF+NR+DE++ F+ L I +I Sbjct: 716 LTSNVASGALLEE--DLSEADKQKAIKESLRQFFKPEFLNRLDEIISFNALDSHAIINIV 773 Query: 776 QIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILS 835 I + + K+ ERG I + ++A +L++E G+D YGARPLKRA+ + +E+ LA+ IL Sbjct: 774 GILFENVQKKALERGINITLDEKAKELIAEAGFDRFYGARPLKRALYEMVEDKLAELILE 833 Query: 836 GELVPGKVIRLEVNEDRIV 854 ++ + V + IV Sbjct: 834 DKIKENDSVAFVVENNEIV 852 >UniRef50_P31541 ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4A, chloroplastic n=62 Tax=cellular organisms RepID=CLPAA_SOLLC Length = 926 Score = 837 bits (2162), Expect = 0.0, Method: Composition-based stats. Identities = 394/873 (45%), Positives = 555/873 (63%), Gaps = 75/873 (8%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 +R T K + AQ A + F+ ++ L+ + G + +L S GIN R Sbjct: 93 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDAR 152 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG- 120 ++ + + R ++ + RVL L + A++ G N+I SE +L L Sbjct: 153 VEVEKIIGRGSGFIAV--EIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEG 210 Query: 121 TLADILKAAGATTANITQAIEQMR------GGESVNDQGAEDQRQALKKYTIDLTERAEQ 174 A +L+ GA NI + +M G SV + + L++Y +LT+ AE+ Sbjct: 211 VAARVLENLGADPTNIRTQVIRMVGESSEAVGASVGGGTSGLKMPTLEEYGTNLTKLAEE 270 Query: 175 GKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKG 234 GKLDPV+GR +I R Q+L RRTKNNP LIGEPGVGKTAI EGLAQRI NG+VPE ++G Sbjct: 271 GKLDPVVGRQAQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEG 330 Query: 235 RRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMD 294 ++V+ LDMG LVAG KYRGEFEERLK ++ ++ + + +ILFIDE+HT++GAG A+GA+D Sbjct: 331 KKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSD-EIILFIDEVHTLIGAGAAEGAID 389 Query: 295 AGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLK 354 A N+LKPALARGEL C+GATTLDEYR++IEKD ALERRFQ V V EPSV++TI IL+GL+ Sbjct: 390 AANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLR 449 Query: 355 ERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDR 414 ERYE+HH + TD AI AAA LSH+YI+DR LPDKAIDLIDEA S +R++ PEE Sbjct: 450 ERYEIHHKLHYTDEAIEAAAKLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARE 509 Query: 415 LDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQT 474 L++ + Q+ E+ ++ D +K + + E + KA+ ++L Sbjct: 510 LEKELRQITKEKNEAVRGQD--------------FEKAGELRDREMDLKAQISAL----- 550 Query: 475 IKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDA 534 I E++K E G VT+A Sbjct: 551 IDKNKEKSKAESEAGDAAG-----------------------------------PIVTEA 575 Query: 535 EIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADP 594 +I +++ WTGIPV ++ E ++LL+ME+ LH RVIGQ+EAV A+S AIRR+R GL +P Sbjct: 576 DIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHTRVIGQDEAVKAISRAIRRARVGLKNP 635 Query: 595 NRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYV 654 NRPI SF+F GPTGVGK+EL K+LA + F S+EAM+R+DMSEFME+H+VS+L+G+PPGYV Sbjct: 636 NRPIASFIFSGPTGVGKSELAKSLATYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYV 695 Query: 655 GYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVV 714 GY EGG LTEAVRRRPY+V+L DE+EKAHPDVFN++LQ+L+DGRLTD +GRTVDF+NT++ Sbjct: 696 GYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLL 755 Query: 715 IMTSNLGSDLIQE-----------RFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVF 763 IMTSN+GS +I++ + Y +K LV + FRPEF+NR+ E++VF Sbjct: 756 IMTSNVGSSVIEKGGRRIGFDLDFDEKDSSYNRIKSLVTEELKQYFRPEFLNRLSEMIVF 815 Query: 764 HPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQ 823 L + + IA I LK ++ RL+ + E+ +++ + + GY+P YGARPL+RAI + Sbjct: 816 RQLTKLEVKEIADIMLKEVFVRLKNKEIELQVTERFRDRVVDEGYNPSYGARPLRRAIMR 875 Query: 824 QIENPLAQQILSGELVPGKVIRLEVNEDRIVAV 856 +E+ +A+++L+GE+ G + ++V+ D V V Sbjct: 876 LLEDSMAEKMLAGEIKEGDSVIVDVDSDGNVTV 908 >UniRef50_P35100 ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplastic n=354 Tax=cellular organisms RepID=CLPC_PEA Length = 922 Score = 829 bits (2142), Expect = 0.0, Method: Composition-based stats. Identities = 384/873 (43%), Positives = 557/873 (63%), Gaps = 76/873 (8%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 +R T K + AQ A + F+ ++ L+ + G + +L S GIN R Sbjct: 91 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDAR 150 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG- 120 ++ + + R ++ + RVL L + A++ G N+I SE +L L Sbjct: 151 VEVEKIIGRGSGFVAV--EIPFTPRAKRVLELSQEEARQLGHNYIGSEHLLLGLLREGEG 208 Query: 121 TLADILKAAGATTANITQAIEQM------RGGESVNDQGAEDQRQALKKYTIDLTERAEQ 174 A +L+ GA NI + +M +V + ++ L++Y +LT+ AE+ Sbjct: 209 VAARVLENLGADPTNIRTQVIRMVGESADSVTATVGSGSSNNKTPTLEEYGTNLTKLAEE 268 Query: 175 GKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKG 234 GKLDPV+GR +I R Q+L RRTKNNP LIGEPGVGKTAI EGLAQRI NG+VPE ++G Sbjct: 269 GKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEG 328 Query: 235 RRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMD 294 ++V+ LDMG LVAG KYRGEFEERLK ++ ++ + + ++ILFIDE+HT++GAG A+GA+D Sbjct: 329 KKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSD-DIILFIDEVHTLIGAGAAEGAID 387 Query: 295 AGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLK 354 A N+LKPALARGEL C+GATTLDEYR++IEKD LERRFQ V V EP+V++TI IL+GL+ Sbjct: 388 AANILKPALARGELQCIGATTLDEYRKHIEKDPDLERRFQPVKVPEPTVDETIQILKGLR 447 Query: 355 ERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDR 414 ERYE+HH ++ TD A++AAA LS++YI+DR LPDKAIDL+DEA S +R+Q PEE Sbjct: 448 ERYEIHHKLRYTDEALIAAAQLSYQYISDRFLPDKAIDLVDEAGSRVRLQHAQLPEEAKE 507 Query: 415 LDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQT 474 LD+ + ++ E++ ++ D +K + + E + KA+ ++L Sbjct: 508 LDKEVRKIVKEKEEYVRNQD--------------FEKAGELRDKEMDLKAQISAL----- 548 Query: 475 IKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDA 534 + E ++ + A + VT+ Sbjct: 549 -------IEKGKEMSKAETETADEGPI-----------------------------VTEV 572 Query: 535 EIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADP 594 +I +++ WTGIPV ++ E ++LL+ME LH R+IGQ+EAV A+S AIRR+R GL +P Sbjct: 573 DIQHIVSSWTGIPVDKVSADESDRLLKMEDTLHKRIIGQDEAVQAISRAIRRARVGLKNP 632 Query: 595 NRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYV 654 NRPI SF+F GPTGVGK+EL KALA + F S+EAM+R+DMSEFME+H+VS+L+G+PPGYV Sbjct: 633 NRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYV 692 Query: 655 GYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVV 714 GY EGG LTEAVRRRPY+V+L DE+EKAHPDVFN++LQ+L+DGRLTD +GRTVDF+NT++ Sbjct: 693 GYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLL 752 Query: 715 IMTSNLGSDLIQE-----------RFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVF 763 IMTSN+GS +I++ + Y +K LV + FRPEF+NR+DE++VF Sbjct: 753 IMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVF 812 Query: 764 HPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQ 823 L + + IA I LK +++RL+ + E+ +++ + + GY+P YGARPL+RAI + Sbjct: 813 RQLTKLEVKEIADIMLKEVFQRLKTKEIELQVTERFRDRVVDEGYNPSYGARPLRRAIMR 872 Query: 824 QIENPLAQQILSGELVPGKVIRLEVNEDRIVAV 856 +E+ +A+++L+ E+ G + ++V+ D V V Sbjct: 873 LLEDSMAEKMLAREIKEGDSVIVDVDSDGKVIV 905 >UniRef50_D2VCN5 Heat shock protein 101 n=1 Tax=Naegleria gruberi RepID=D2VCN5_NAEGR Length = 891 Score = 827 bits (2137), Expect = 0.0, Method: Composition-based stats. Identities = 395/878 (44%), Positives = 591/878 (67%), Gaps = 28/878 (3%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLL-------TSA 53 M D+ T+K ++DA +A + FI PLH+ + + N + L + Sbjct: 1 MNPDKFTDKTNQTISDAYMMAKDRKHIFISPLHVAAVIFNPDDKQSLGFLVCKKVSSSQK 60 Query: 54 GINAGQLRTDINQALN-RLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFV 112 I+ ++ ++ A+N ++ + D+ P++ LV VL +K+ + D+ ++ + + Sbjct: 61 TIDCNKIADELKNAMNTKISVQDPPVEDLAPNRRLVSVLQAAEKIKDQLDDHLLAVDHVL 120 Query: 113 LAALESRGTLADILKAAG--ATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTE 170 LA ++ ILKA T + + +RGG+ V+ + AE AL +Y +++ + Sbjct: 121 LALMDDSDVSNAILKATNNQLTKQVLKDTLALIRGGKKVDSKQAETGYDALNRYGVNMVD 180 Query: 171 RAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPE 230 A QGK DP+IGRD+E+ R I+VL RRTKNN L+ EPGVGK+A+VEGLA RI G+VP+ Sbjct: 181 MARQGKYDPLIGRDKELARMIRVLSRRTKNNCCLLAEPGVGKSALVEGLAMRIATGDVPK 240 Query: 231 GLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKA- 289 L+ ++ +LD+G++VAG+K+RGEFEERLK +L ++ + G+VILFIDE+HT+ GAG Sbjct: 241 NLQ-TQLYSLDLGSMVAGSKFRGEFEERLKSILKEVEES-GDVILFIDEIHTLSGAGSTG 298 Query: 290 DGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAI 349 D ++DA NM+KP LARG L +GATT EYR+YIEKDAALERRFQ V++AEP+V++TI+I Sbjct: 299 DNSLDASNMIKPLLARGVLRLIGATTPTEYRKYIEKDAALERRFQPVYLAEPNVQETISI 358 Query: 350 LRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKP 409 LRGLK RYE HH V+I D AIV AA LS RYI R PDK+IDLIDEA+++IR+Q++S+P Sbjct: 359 LRGLKSRYEAHHGVRILDSAIVEAARLSARYIQGRYNPDKSIDLIDEASANIRVQLNSRP 418 Query: 410 EELDRLDRRIIQLKLEQQALMKES---DEASKKRLDMLNEELSDKERQYSELEEEWKAEK 466 E +D L+R+ +QL++E AL KE DE +K+RL+ + E+S + + ++ +++AE Sbjct: 419 EIIDTLERKKLQLQVEATALEKEKNYSDEKTKQRLEQVKNEISKVDEELKPIKLKYEAET 478 Query: 467 ASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGK---- 522 + ++ + +LE+ K + A DLA S+L+YG IPE+E+ +++ + + Sbjct: 479 SLVNELREKNQKLEKLKAKMVDAEARYDLALASDLKYGAIPEIEESIQSLKKKIEQKEED 538 Query: 523 -------TMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNE 575 + + + VT +I EV+ARWTGIPV R+ ESE++K+L++E+ L RV+GQ + Sbjct: 539 DRKNGVNSANMTSDVVTPEQINEVIARWTGIPVQRLNESEKDKVLKLEERLMKRVVGQED 598 Query: 576 AVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMS 635 A+ ++S +I RS+AGL++PN+PIGSFLFLG +GVGKT L K++A +FD ++ MVRIDMS Sbjct: 599 AIKSLSESIIRSKAGLSNPNKPIGSFLFLGSSGVGKTYLAKSIAYELFDDEKHMVRIDMS 658 Query: 636 EFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLD 695 E ME+HSVSRL+G+P GYVGY + LTE VRR+PY+V+L DE+EKAHP V N+LLQ+LD Sbjct: 659 ELMEQHSVSRLIGSPAGYVGYSDDNQLTEPVRRQPYTVVLFDEIEKAHPRVLNVLLQLLD 718 Query: 696 DGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFIN 755 DGRLTDGQGRTVDF+NTV+IMTSN+GS + + +K+ V+ V +F PEF+N Sbjct: 719 DGRLTDGQGRTVDFKNTVIIMTSNIGSKHFL-TMNDNNKETVKKQVMNEVRQHFTPEFLN 777 Query: 756 RIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGAR 815 R+D+++ F PL +H+ ++ ++Q++ L +RL+ER I I D A +L+ G+DP YGAR Sbjct: 778 RLDDILFFEPLTSKHLVNVVRLQMESLTERLKERDISIDIRDSACELVISEGFDPNYGAR 837 Query: 816 PLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRI 853 PL R IQ+ I L++ +L GEL G I ++ + + Sbjct: 838 PLARFIQKHIVTELSKLMLKGELRDGSQIVIQGVDGKF 875 >UniRef50_C8NK17 ATP-dependent Clp protease ATP-binding subunit n=21 Tax=Bacteria RepID=C8NK17_COREF Length = 927 Score = 823 bits (2126), Expect = 0.0, Method: Composition-based stats. Identities = 392/890 (44%), Positives = 551/890 (61%), Gaps = 106/890 (11%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 +R T++ + + AQ A ++ +I H++ L+++ G + L S GI+ +R Sbjct: 1 MFERFTDRARRVIVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLDAVR 60 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL-ESRG 120 ++ + + + T G + + +VL L + + G +I +E +L + E G Sbjct: 61 QEVEEIIGHGSK--PTTGHIPFTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGEG 118 Query: 121 TLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQ--------------------- 159 A +L GA + Q + Q+ G G+ D Q Sbjct: 119 VAAQVLVKLGADLPRVRQQVIQLLSGYEGGQGGSPDSPQGGQGGDAVGAGSAPGGRATGS 178 Query: 160 ---------ALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGV 210 L ++ +LT+ A+ GKLDPV+GRD+EI R +QVL RRTKNNPVLIGEPGV Sbjct: 179 GAGERSNSLVLDQFGRNLTQAAKDGKLDPVVGRDKEIERIMQVLSRRTKNNPVLIGEPGV 238 Query: 211 GKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQE 270 GKTA+VEGLA I+NG+VPE LK ++V +LD+G+LVAG++YRG+FEERLK VL ++ ++ Sbjct: 239 GKTAVVEGLALDIVNGKVPETLKDKQVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQR- 297 Query: 271 GNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALE 330 G++ILFIDE+HT+VGAG A+GA+DA ++LKP LARGEL +GATTLDEYR++IEKDAALE Sbjct: 298 GDIILFIDEIHTLVGAGAAEGAIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALE 357 Query: 331 RRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKA 390 RRFQ V V EPSVE +I IL+GL++RYE HH V ITD A+VAAA LS RYI DR LPDKA Sbjct: 358 RRFQPVQVPEPSVELSIEILKGLRDRYEAHHRVSITDGALVAAAQLSDRYINDRFLPDKA 417 Query: 391 IDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSD 450 +DLIDE + RM+I L ++E ++D Sbjct: 418 VDLIDE--AGARMRIKRMTAPES---------------------------LREVDERIAD 448 Query: 451 KERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELE 510 R+ + EKA+ G + + +L + + E+ R GDL ++E Sbjct: 449 VRREKEAAIDAQDFEKAA--GLRDKERKLGEERAEKEKQWRSGDLEEIAE---------- 496 Query: 511 KQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRV 570 V + +IAEVLA WTGIPV ++ E+E +LL ME+ELH R+ Sbjct: 497 --------------------VGEEQIAEVLATWTGIPVFKLTEAESSRLLNMEEELHKRI 536 Query: 571 IGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMV 630 IGQ+EAV AVS AIRR+RAGL DP RP GSF+F GP+GVGKTEL KALA F+F D++++ Sbjct: 537 IGQDEAVKAVSRAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALAEFLFGDDDSLI 596 Query: 631 RIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNIL 690 +IDM EF ++ + SRL GAPPGYVGYEEGG LTE VRR+P+SV+L DE+EKAH +++N L Sbjct: 597 QIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTL 656 Query: 691 LQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFG-----------ELDYAHMKE 739 LQVL+DGRLTDGQGR VDF+NTV+I TSNLG+ I + G + Y MK Sbjct: 657 LQVLEDGRLTDGQGRIVDFKNTVLIFTSNLGTQDISKAVGLGFSGSNETDSDAQYDRMKN 716 Query: 740 LVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEA 799 V + +FRPEF+NRIDE+VVFH L + I + ++ + R+ + L ++ I ++D+A Sbjct: 717 KVHDELKKHFRPEFLNRIDEIVVFHQLTREQIIQMVELLIGRVSRALADKDMGIELTDKA 776 Query: 800 LKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVN 849 LL+ G+DPV GARPL+R IQ++IE+ ++++IL GE+ G+++ ++V+ Sbjct: 777 KALLASRGFDPVLGARPLRRTIQREIEDAMSEKILFGEIGAGEIVTVDVD 826 >UniRef50_Q8IB03 ClpB protein, putative n=13 Tax=cellular organisms RepID=Q8IB03_PLAF7 Length = 1070 Score = 822 bits (2124), Expect = 0.0, Method: Composition-based stats. Identities = 401/915 (43%), Positives = 597/915 (65%), Gaps = 62/915 (6%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQ-EGGSVSPLLTSAGINAGQ 59 + D T K A++ + +D+ ++E L+ ALLN G +L +GI+ Sbjct: 151 INSDDYTEKAWEAISSLNKIGEKYDSAYVEAEMLLLALLNDSPDGLAERILKESGIDTQL 210 Query: 60 LRTDINQALNRLPQV-EGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES 118 L +I+ L + P++ G G + L VL+ +L ++ D +IS E +L+ + Sbjct: 211 LVQEIDDYLKKQPKMPSGFGEQKILGRTLQTVLSTSKRLKKEFNDEYISIEHLLLSIISE 270 Query: 119 RGTLAD-ILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKL 177 L + +A+E++RG + V + E QAL+KY+ DLT A GKL Sbjct: 271 DSKFTRPWLLKYNVNYEKVKKAVEKIRGKKKVTSKTPEMTYQALEKYSRDLTALARAGKL 330 Query: 178 DPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRV 237 DPVIGRD EIRR IQ+L RRTKNNP+L+G+PGVGKTAIVEGLA +I+ G+VP+ LKGR++ Sbjct: 331 DPVIGRDNEIRRAIQILSRRTKNNPILLGDPGVGKTAIVEGLAIKIVQGDVPDSLKGRKL 390 Query: 238 LALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGK-ADGAMDAG 296 ++LDM +L+AGAKYRG+FEERLK +L ++ EG V++FIDE+HT+VGAG A+GA+DAG Sbjct: 391 VSLDMSSLIAGAKYRGDFEERLKSILKEVQDAEGQVVMFIDEIHTVVGAGAVAEGALDAG 450 Query: 297 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 356 N+LKP LARGEL C+GATT+ EYRQ+IEKD ALERRFQ++ V +PSV++TI+ILRGLKER Sbjct: 451 NILKPMLARGELRCIGATTVSEYRQFIEKDKALERRFQQILVEQPSVDETISILRGLKER 510 Query: 357 YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 416 YE+HH V+I D A+V AA LS RYI+ R LPDKAIDLIDEAAS++++Q+ SKP +L+ ++ Sbjct: 511 YEVHHGVRILDSALVQAAVLSDRYISYRFLPDKAIDLIDEAASNLKIQLSSKPIQLENIE 570 Query: 417 RRIIQLKLEQQA------------------------------------------------ 428 +++IQL++E+ + Sbjct: 571 KQLIQLEMEKISILGDKQKNLFNYSSVANTHNNNNNSSISSNNSSSYGNAEETEATVDYT 630 Query: 429 -----LMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAK 483 L K +E RL M++ +S+ ++ ++ + W EK+ + + IK ++ K Sbjct: 631 KSPNFLKKRINEKEIDRLKMIDRIMSELRKEQRKILDSWSTEKSYVDNIRAIKERIDVVK 690 Query: 484 IAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE----GKTMRLLRNKVTDAEIAEV 539 I IE+A R DL R +EL++ +P+LEKQL+ A + + R+L+++VT +I + Sbjct: 691 IEIEKAERYFDLNRAAELRFETLPDLEKQLKKAEENYLNDIPEKSRILKDEVTSEDIVNI 750 Query: 540 LARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIG 599 ++ TGI ++++++SE+EK+L +E ELH ++IGQ++AV V+ A++RSR G+ +P RPI Sbjct: 751 VSMSTGIRLNKLLKSEKEKILNLENELHKQIIGQDDAVKVVTKAVQRSRVGMNNPKRPIA 810 Query: 600 SFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEG 659 S +FLGPTGVGKTEL K LA+ +FD+ EA++ DMSE+MEKHS+S+L+GA PGYVGYE+G Sbjct: 811 SLMFLGPTGVGKTELSKVLADVLFDTPEAVIHFDMSEYMEKHSISKLIGAAPGYVGYEQG 870 Query: 660 GYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSN 719 G LT+AVR++PYS+IL DE+EKAHPDV+N+LL+V+D+G+L+D +G +FRNT++I TSN Sbjct: 871 GLLTDAVRKKPYSIILFDEIEKAHPDVYNLLLRVIDEGKLSDTKGNVANFRNTIIIFTSN 930 Query: 720 LGSDLIQERFGELD-YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQ 778 LGS I + + + +KE V+ V FRPEF NRID+ V+F L ++ + IA I+ Sbjct: 931 LGSQSILDLANDPNKKEKIKEQVMKSVRETFRPEFYNRIDDHVIFDSLSKKELKEIANIE 990 Query: 779 LKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGEL 838 ++++ RL ++ ++I I D + + YDP +GARPLKR IQ +IE +A +IL Sbjct: 991 IRKVANRLFDKNFKITIDDAVFSYIVDKAYDPSFGARPLKRVIQSEIETEIAVRILDETF 1050 Query: 839 VPGKVIRLEVNEDRI 853 V I + + + ++ Sbjct: 1051 VENDTINISLKDQKL 1065 >UniRef50_D0D9L8 Chaperone protein ClpB n=1 Tax=Citreicella sp. SE45 RepID=D0D9L8_9RHOB Length = 864 Score = 822 bits (2122), Expect = 0.0, Method: Composition-based stats. Identities = 434/735 (59%), Positives = 558/735 (75%), Gaps = 2/735 (0%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M L++ T + + + AQ++A+ ++Q + P HL+ AL++ E G S L+T AG ++ Sbjct: 1 MNLEKFTERSRGFIQAAQTIAMRDNHQRLVPEHLLKALMDDEQGLASNLITRAGGQPPRV 60 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG 120 + Q L+++P+V G G V RVL+ +K+A+K GD+F+ E + A + Sbjct: 61 VEVLEQKLSKIPRVSGDAGQVYLDPATARVLDEAEKIAKKAGDSFVPVERILTALAIEKS 120 Query: 121 TLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPV 180 + L+A T + +AI +R G + + AE+ ALKKY DLTE AEQG++DP+ Sbjct: 121 GAKEALEAGNLTPQRLNEAINDLRKGRTADSASAEEGYDALKKYARDLTEAAEQGRIDPI 180 Query: 181 IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL 240 IGRDEEIRR++QVL RRTKNNPVLIGEPGVGKTAI EGLA RII+G+VPE L+ +R++AL Sbjct: 181 IGRDEEIRRSMQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIIDGDVPESLRNKRLMAL 240 Query: 241 DMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLK 300 DMGAL+AGAKYRGEFEERLK +L ++ G +ILFIDE+HT+VGAGK DGAMDA N+LK Sbjct: 241 DMGALIAGAKYRGEFEERLKSILKEIESAAGEIILFIDEMHTLVGAGKTDGAMDASNLLK 300 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELH 360 PALARGELHCVGATTLDEYR+++EKD AL RRFQ V V EP+VEDTI+ILRG+KE+YELH Sbjct: 301 PALARGELHCVGATTLDEYRKHVEKDPALARRFQPVMVQEPTVEDTISILRGIKEKYELH 360 Query: 361 HHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRII 420 H V+I+D A+VAAATLSHRYI DR LPDKAIDL+DEAAS +RM++DSKPEELD+LDR I+ Sbjct: 361 HGVRISDSALVAAATLSHRYITDRFLPDKAIDLMDEAASRLRMEVDSKPEELDQLDRNIL 420 Query: 421 QLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELE 480 Q+++E +AL E D ASK RL+ L +EL+D E + +E+ +W+AE+ L+ + +K +L+ Sbjct: 421 QMQIEVEALKLEDDAASKDRLEKLEKELADLEEKSAEMTAQWQAERDKLASARDLKEQLD 480 Query: 481 QAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVL 540 + + +E A+R G+ A+ ELQYGKIPE+EK+L A EG ++ V +IAEV+ Sbjct: 481 RLRAELEIAKREGNFAKAGELQYGKIPEIEKKLAEAEAAEGDV--MVEEAVRPEQIAEVV 538 Query: 541 ARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGS 600 RWTGIP S+M+E EREKLLRME LH RV+GQN+AV AV+NA+RR+RAGL D NRP+GS Sbjct: 539 ERWTGIPTSKMLEGEREKLLRMEDGLHKRVVGQNQAVKAVANAVRRARAGLNDENRPLGS 598 Query: 601 FLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG 660 FLFLGPTGVGKTEL KA+A F+FD D AMVRIDMSEFMEKHSV+RL+GAPPGYVGY+EGG Sbjct: 599 FLFLGPTGVGKTELTKAVAEFLFDDDSAMVRIDMSEFMEKHSVARLIGAPPGYVGYDEGG 658 Query: 661 YLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL 720 LTEAVRRRPY V+L DEVEKAHPDVFN+LLQVLDDG LTDGQGRTVDF+ T++++TS L Sbjct: 659 VLTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGVLTDGQGRTVDFKQTLIVLTSTL 718 Query: 721 GSDLIQERFGELDYA 735 + G Sbjct: 719 ARSAVAASRGGRQQP 733 >UniRef50_C8NYT7 ATP-dependent Clp protease ATP-binding subunit n=6 Tax=Bacteria RepID=C8NYT7_9CORY Length = 967 Score = 821 bits (2120), Expect = 0.0, Method: Composition-based stats. Identities = 390/897 (43%), Positives = 549/897 (61%), Gaps = 112/897 (12%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 +R T++ + + AQ A ++ +I H++ L+ + G + L S GIN +R Sbjct: 1 MFERFTDRARRVIVLAQQEARDLNHNYIGTEHILLGLIQEGEGVAAKALESMGINLDDVR 60 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL-ESRG 120 ++ + + R Q G V + +VL L + + G +I +E +L + E G Sbjct: 61 REVEEIIGRGSQ--PHTGHVPFTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGEG 118 Query: 121 TLADILKAAGATTANITQAIEQMRGGES-------------------------------- 148 A +L GA + Q + Q+ G Sbjct: 119 VAAQVLIKLGADLPRVRQQVIQLLSGYEGGEGQNPEIAEGQQGGPGLTGAGAGSGSMGGM 178 Query: 149 ----VNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204 +QG L ++ +LT A++GKLDPV+GRD+EI R +QVL RRTKNNPVL Sbjct: 179 GSGRGGNQGERSNSLVLDQFGRNLTAAAKEGKLDPVVGRDKEIERIMQVLSRRTKNNPVL 238 Query: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264 IGEPGVGKTA+VEGLA I NG+VPE LK ++V +LD+G+LVAG++YRG+FEERLK VL Sbjct: 239 IGEPGVGKTAVVEGLALDIANGKVPETLKDKQVYSLDLGSLVAGSRYRGDFEERLKKVLK 298 Query: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324 ++ ++ G++ILFIDE+HT+VGAG A+GA+DA ++LKP LARGEL +GATTLDEYR++IE Sbjct: 299 EINQR-GDIILFIDEIHTLVGAGAAEGAIDAASLLKPKLARGELQTIGATTLDEYRKHIE 357 Query: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384 KDAALERRFQ V V EPSVE+TI IL+GL++RYE HH V TD A+ AAA LS RYI DR Sbjct: 358 KDAALERRFQPVQVDEPSVENTIQILKGLRDRYEAHHRVSYTDDALAAAANLSDRYINDR 417 Query: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444 LPDKA+DL+DEA + +R++ + P+ L +D RI +++ E++A + D Sbjct: 418 FLPDKAVDLLDEAGARMRIKRMTAPKGLRDVDDRITEVRREKEAAIDAQD---------- 467 Query: 445 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504 +G + + +L + + E+ R G+L ++E Sbjct: 468 ---------------------FEKAAGLRDTERKLGEERAEKEKQWRAGELEDIAE---- 502 Query: 505 KIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQ 564 V + +IA+VLA WTGIPV ++ ESE +LL ME Sbjct: 503 --------------------------VGEEQIADVLANWTGIPVFKLTESESSRLLHMED 536 Query: 565 ELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFD 624 ELH R+IGQ++AV AVS AIRR+RAGL DP RP GSF+F GP+GVGKTEL KALA F+F Sbjct: 537 ELHQRIIGQDDAVKAVSRAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALAEFLFG 596 Query: 625 SDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHP 684 +++++++DM EF ++ + SRL GAPPGYVGYEEGG LTE VRR+P+SV+L DE+EKAH Sbjct: 597 DEDSLIQVDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHK 656 Query: 685 DVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFG-----------ELD 733 +++N LLQVL++G +TDGQGR VDF+NTV+I TSNLG+ I + G + Sbjct: 657 EIYNTLLQVLEEGHVTDGQGRNVDFKNTVLIFTSNLGTSDISKAVGLGFSGASTTDSDAQ 716 Query: 734 YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 793 Y MK+ V + +FRPEF+NRIDE+VVFH L ++ I + ++ RL K LE + I Sbjct: 717 YERMKQKVHDELKKHFRPEFLNRIDEIVVFHQLTQEQIVEMVELLAGRLAKNLETQDMGI 776 Query: 794 HISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNE 850 +S++A LL+ G+DPV GARPL+R IQ++IE+ L+++IL GE+ G++I + V Sbjct: 777 ELSEDAKNLLAARGFDPVLGARPLRRTIQREIEDVLSEKILFGEIGAGEIIEVGVTN 833 >UniRef50_B5HY88 Chaperone protein clpB n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5HY88_9ACTO Length = 861 Score = 819 bits (2115), Expect = 0.0, Method: Composition-based stats. Identities = 453/810 (55%), Positives = 583/810 (71%), Gaps = 7/810 (0%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLN-QEGGSVSPLLTSAGINAGQLRTDI 64 LTN+ + A+ A + A+ + + P HL+ ALL Q+ ++ LL + + +R Sbjct: 14 LTNRSRDAINAAGNRAVTEGHPDLTPAHLLLALLQGQDNENIVDLLAAVDADQAAVRAGA 73 Query: 65 NQALNRLPQVEGTG-GDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLA 123 +AL LP V G+ QP++DL+ V+ A+ GD ++S+E ++ G A Sbjct: 74 EKALGSLPSVAGSTVAPPQPNRDLLAVIADAQSRAKDLGDEYLSTEHLLVGIAAKGGPAA 133 Query: 124 DILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGR 183 ++L GAT + A ++ RGG V E Q +AL+K+ D T A GKLDPVIGR Sbjct: 134 EVLTGQGATPKKLIDAFQKARGGRRVTTADPEGQYKALEKFGTDFTAAARDGKLDPVIGR 193 Query: 184 DEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMG 243 D+EIRR +QVL RRTKNNPVLIGEPGVGKTA+VEGLAQRI+ G+VPE LK +R+++LD+ Sbjct: 194 DQEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPESLKDKRLVSLDLS 253 Query: 244 ALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAG-KADGAMDAGNMLKPA 302 A+VAGAKYRGEFEERLK VL ++ +G +I FIDELHT+VGAG D +MDAGNMLKP Sbjct: 254 AMVAGAKYRGEFEERLKTVLAEIRDSDGQIITFIDELHTVVGAGAGGDSSMDAGNMLKPM 313 Query: 303 LARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHH 362 LARGEL VGATTLDEYR+ IEKD ALERRFQ+V VAEP+VEDTIAILRGLK RYE HH Sbjct: 314 LARGELRMVGATTLDEYRERIEKDPALERRFQQVLVAEPTVEDTIAILRGLKGRYEAHHK 373 Query: 363 VQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQL 422 VQI D A+VAAA LS RYI R LPDKAIDL+DEAAS +RM+IDS P E+D L R + +L Sbjct: 374 VQIADSALVAAAALSDRYITSRFLPDKAIDLVDEAASRLRMEIDSSPLEIDELQRGVDRL 433 Query: 423 KLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQA 482 K+E+ AL+KE+D AS++RL+ L +L+DKE + L W+ EK SL+ +K +L++ Sbjct: 434 KMEELALVKETDPASRERLERLRRDLADKEEELRGLTARWEKEKQSLNRVGELKEKLDEL 493 Query: 483 KIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMR--LLRNKVTDAEIAEVL 540 + E+A+R GD S+L YG+IP LE+ LEAA++ E + + +++ +V +IA+ + Sbjct: 494 RGQAERAQRDGDFDTASKLLYGEIPTLERDLEAASEAEEEVSKDTMVKEEVGADDIADTV 553 Query: 541 ARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGS 600 A WTGIP R++E E +KLLRME+EL R+IGQ EAV AVS+A+RR+RAG+ADP+RP GS Sbjct: 554 AAWTGIPAGRLLEGETQKLLRMEEELGKRLIGQGEAVRAVSDAVRRTRAGIADPDRPTGS 613 Query: 601 FLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG 660 FLFLGPTGVGKTEL KALA+F+FD + AMVRIDMSE+ EKH+VSRLVGAPPGYVGYEEGG Sbjct: 614 FLFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVSRLVGAPPGYVGYEEGG 673 Query: 661 YLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL 720 LTEAVRRRPYSV+LLDEVEKAHP+VF+ILLQVLDDGRLTDGQGRTVDFRN ++++TSNL Sbjct: 674 QLTEAVRRRPYSVVLLDEVEKAHPEVFDILLQVLDDGRLTDGQGRTVDFRNAILVLTSNL 733 Query: 721 GSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLK 780 GS + + KE VL VV +F+PEF+NR+D++VVF L + + IA++Q+ Sbjct: 734 GSQFLVDPI--TSETEKKEQVLEVVRASFKPEFLNRLDDLVVFSALTKDELGRIARLQID 791 Query: 781 RLYKRLEERGYEIHISDEALKLLSENGYDP 810 RL KRL ER L S G+ P Sbjct: 792 RLAKRLAERRAHPGGHRRGPGLASRRGHGP 821 >UniRef50_C3XDZ0 ATP-dependent protease ATP-binding subunit n=2 Tax=Campylobacterales RepID=C3XDZ0_9HELI Length = 898 Score = 818 bits (2112), Expect = 0.0, Method: Composition-based stats. Identities = 399/893 (44%), Positives = 578/893 (64%), Gaps = 47/893 (5%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 D+LTN+ + L +A A+ H N +P+H + A+L + L N L Sbjct: 4 FDKLTNQMREILNNAAQFAITHKNNETQPIHTLLAMLADSNMLLYQALQKNNENINALIQ 63 Query: 63 DINQALNRLPQVE-GTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGT 121 ++ +++LP+V ++ S+ L L A +GD+FI FV A L+S Sbjct: 64 NLTLEIDKLPKVSNANTQNMSLSKSLQEALQNALSFATTQGDSFIGVGSFVRANLDSH-- 121 Query: 122 LADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVI 181 D+LK + ++ MR G ++ Q ++D + L KY I+L++ A Q KL+PVI Sbjct: 122 FKDLLK--NIDKLELINTLKNMRKGMKIDSQSSDDTLETLDKYGINLSKLAAQNKLNPVI 179 Query: 182 GRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALD 241 GR+EEI R +Q+L R+TKNNP+L+GEPGVGKTA+VEGLA +I EVP L+ ++V+ALD Sbjct: 180 GRNEEIERMMQILIRKTKNNPILLGEPGVGKTAVVEGLAIKIAKKEVPLSLQNKQVIALD 239 Query: 242 MGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKP 301 M AL+AGAKYRG+FEERLK V++++ K +ILFIDE+HT+VGAG ++G MDA N+LKP Sbjct: 240 MTALMAGAKYRGDFEERLKAVVDEV-KNNDEIILFIDEIHTIVGAGASEGGMDAANILKP 298 Query: 302 ALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHH 361 ALARGEL +GATTL EYR+Y EKDAAL RRFQ V + EPS + + I+RG+KE E HH Sbjct: 299 ALARGELRTIGATTLKEYRKYFEKDAALARRFQPVNINEPSQNEALQIMRGIKESLEAHH 358 Query: 362 HVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQ 421 +V ITD A+V + LS RYI +R LPDKAIDLIDEAA+ ++MQI+S+P+ + + R I Sbjct: 359 NVSITDGALVESVKLSSRYITNRYLPDKAIDLIDEAAAELKMQIESEPKAIAKAKRDIEA 418 Query: 422 LKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQ 481 L++E+ AL + +E RL + +EL D + + S L+ ++ EKA S +K ++E Sbjct: 419 LEVEKVALNLDKNEQHNTRLQEIEKELIDSKEKLSGLQSAFENEKAIFSDIAKVKNDIES 478 Query: 482 AKIAIEQARRVGDLARMSELQYGKIPELE---KQLEAATQLEGKTMRLLRNKVTDAEIAE 538 + E ARR GD AR E+++GKIP + K LEA Q K+ LL++ VT IAE Sbjct: 479 LRRESEIARRSGDYARAGEIEHGKIPNAQAELKNLEAKWQDLQKSGSLLKHAVTKESIAE 538 Query: 539 VLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPI 598 +++RWT IPV +M+ESE+ ++L +E+ L VIGQN+A+++++ AI+R++AGL D NRPI Sbjct: 539 IVSRWTQIPVGKMLESEKHRILHIEENLKASVIGQNKAIESIARAIKRNKAGLNDANRPI 598 Query: 599 GSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEE 658 SFLFLG +GVGKT+ KALA F+FDS++ +VR+DMSE+M++ ++L GA PGYVGYEE Sbjct: 599 ASFLFLGSSGVGKTQSAKALAKFLFDSEKELVRLDMSEYMQEIDATKLTGAAPGYVGYEE 658 Query: 659 GGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTS 718 GG LTEA++R+PYSV+L DEVEKAHP VFN+LLQVLDDGRL+D +G VDF+NT++I+TS Sbjct: 659 GGILTEAIKRKPYSVVLFDEVEKAHPKVFNVLLQVLDDGRLSDNKGVVVDFKNTIIILTS 718 Query: 719 NLGSDLIQERFGEL--------------------------------------DYAHMKEL 740 N+GS+ I E E+ A E Sbjct: 719 NIGSEFICEDSKEVAMKRDDIAALQKAIKEGNIESREKLEREKEILNSLVEAQRASQMEK 778 Query: 741 VLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEAL 800 + + FRPEF+NR+D+ ++F+ L I +I I +++ +L++R + ++D Sbjct: 779 IEQELKKFFRPEFLNRLDDKIIFNALSRDDIRNIIDILTQQVALKLKDRNITLVLTDSMK 838 Query: 801 KLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRI 853 L+++G+DPV+GARPLKRA+Q++IE+ LA IL+ EL + ++ E+ + Sbjct: 839 DYLADSGFDPVFGARPLKRAVQREIEDRLADLILNEELSEQSKVIFDIVENSV 891 >UniRef50_B0EI70 Heat shock protein, putative n=1 Tax=Entamoeba dispar SAW760 RepID=B0EI70_ENTDI Length = 840 Score = 817 bits (2111), Expect = 0.0, Method: Composition-based stats. Identities = 386/858 (44%), Positives = 567/858 (66%), Gaps = 30/858 (3%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M ++ T+ ++Q +A N +I P+H+M A++ +E V ++ G + +L Sbjct: 1 MDPNKWTDATVQMFKESQEIAFERKNAYIMPIHMMEAIVEEESNIVIRIVEMMGGDVNKL 60 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG 120 + +I + +N++P D+ +VL + + GD++++ ++ V++ +E + Sbjct: 61 KKEIKETMNKVPVQNPPPVDIGLHPTTQQVLRRAIEKQKIMGDSYLAIDVIVMSLMEEKE 120 Query: 121 TLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPV 180 ++ I+ +G + I +MR G+SV + AE Q +ALKKY DLT +AE GK+DP+ Sbjct: 121 -ISTIVGNSGINVKEFNKKITEMRKGQSVETKEAESQYEALKKYGNDLTAQAESGKMDPI 179 Query: 181 IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL 240 IGRDEEI+R I++L RRTKNNPVLIGEPGVGKTA+VEGLAQRI+ G+VP L+ RV+ L Sbjct: 180 IGRDEEIKRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPSNLQ-CRVIGL 238 Query: 241 DMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKA-DGAMDAGNML 299 DMGAL+AGA+YRG+FEERLK V+ ++ + + +ILFIDE+HT++GAG +GAMDA N+L Sbjct: 239 DMGALIAGAQYRGQFEERLKAVIKEVKESKIPIILFIDEIHTVLGAGATGEGAMDAANIL 298 Query: 300 KPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYEL 359 KP L+RGEL C+GATTL+EYR+Y+EKD A ERRFQ+V+V EPS EDT+ ILRG++E+YE Sbjct: 299 KPMLSRGELRCIGATTLEEYRKYVEKDPAFERRFQQVYVKEPSEEDTLYILRGIREKYEN 358 Query: 360 HHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRI 419 H+ + ITD A+V+AATLS RYI R LPDKAIDL R I + + + + Sbjct: 359 HYGLTITDSALVSAATLSKRYINGRFLPDKAIDL--------RNTIKCRENSIRKRHKEX 410 Query: 420 IQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAEL 479 ++ EE + + ++ Sbjct: 411 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEKGGSEE-----------MKELATKI 459 Query: 480 EQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEV 539 E K E + DL ++L+Y IPE EK+++ + + K ++ +VT +I EV Sbjct: 460 EAMKHKAESTK---DLEVAADLKYYAIPEAEKRMKELKE-QNKETTMISLQVTPTQIEEV 515 Query: 540 LARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIG 599 ++RWTGIPV++M ++E+ +L+++E+ELH RVIGQNEAV AVS+AI RSR GL + RP G Sbjct: 516 VSRWTGIPVTKMNQTEKTRLMKLEEELHKRVIGQNEAVTAVSDAIIRSRGGLGNEKRPTG 575 Query: 600 SFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEG 659 SF+FLGP+GVGKTEL KALA +FD ++ +VRIDMSE+ME HSVSRL+GAPPGYVGYEEG Sbjct: 576 SFMFLGPSGVGKTELAKALAVELFDDEQNIVRIDMSEYMESHSVSRLIGAPPGYVGYEEG 635 Query: 660 GYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSN 719 G LTEA+RR+PYSVIL DE+EKAHP VFN+LLQ+LD+GRLTDG+GRTVDF+NT+VIMTSN Sbjct: 636 GQLTEAIRRKPYSVILFDEIEKAHPQVFNVLLQLLDEGRLTDGRGRTVDFKNTIVIMTSN 695 Query: 720 LGSDLIQERFGELDY--AHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQI 777 LGS++I + +KE V+ +V F+PEF+NR+D++ VF PL E+ + I ++ Sbjct: 696 LGSEIIMKGVEREGQVSRKVKETVMEIVKKTFKPEFLNRLDDITVFSPLSEKELKEIVKL 755 Query: 778 QLKRLYKRLEERG--YEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILS 835 Q+ + K +++R E+ +++ A++ + ++GY YGARP++R I++ + + + I+S Sbjct: 756 QMGEVIKMIKKRYPLSEVEMTEAAIEGIIKSGYSIAYGARPMRRYIEKTVVTSITKSIIS 815 Query: 836 GELVPGKVIRLEVNEDRI 853 G + I+++ D+I Sbjct: 816 GMMKEKNKIQIDYENDKI 833 >UniRef50_P31540 Heat shock protein hsp98 n=59 Tax=Dikarya RepID=HSP98_NEUCR Length = 927 Score = 812 bits (2098), Expect = 0.0, Method: Composition-based stats. Identities = 403/885 (45%), Positives = 584/885 (65%), Gaps = 35/885 (3%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQ---------------EGGSVSPLL 50 T++ + AL DA +LA + + + P+HL ALL+ ++ Sbjct: 7 FTDRAKKALEDAMALAEQYAHSQLLPVHLAVALLDPLPDPSKDQQNAPAGATSSLFRQVI 66 Query: 51 TSAGINAGQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSEL 110 A + + +AL RLP + V + VL ++L + + D +I+ + Sbjct: 67 ERAHGDPQLFDRALKKALVRLPSQDPPPDHVSMAPSFHTVLRKANELQKTQKDTYIAVDH 126 Query: 111 FVLAALESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQ--ALKKYTIDL 168 + A E + + +A +T AI+ +RG + V+ + A+ + + L K+TID+ Sbjct: 127 LITALAEEPSIMNALKEANIPKPKLVTDAIQAIRGTKRVDSRNADTEEEHENLAKFTIDM 186 Query: 169 TERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEV 228 T A +GK+DPVIGR+EEIRR I++L RRTKNNPVLIGEPGVGKT +VEGLAQRI+N +V Sbjct: 187 TAMAREGKIDPVIGREEEIRRVIRILSRRTKNNPVLIGEPGVGKTTVVEGLAQRIVNADV 246 Query: 229 PEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGK 288 P+ L ++L+LD+GALVAG+KYRGEFEER+KGVL ++++ + +ILFIDE+H ++GAG Sbjct: 247 PDNLANCKLLSLDVGALVAGSKYRGEFEERMKGVLKEISESKEMIILFIDEIHLLMGAGA 306 Query: 289 A-DGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTI 347 + +G MDA N+LKP LARG+LHC+GATTL EYR+YIEKDAA ERRFQ+V V EPSV +TI Sbjct: 307 SGEGGMDAANLLKPMLARGQLHCIGATTLAEYRKYIEKDAAFERRFQQVIVKEPSVSETI 366 Query: 348 AILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDS 407 +ILRGLKE+YE+HH V I+D AIVAAA L+ RY+ R+LPD AIDLIDEAA+++R+ +S Sbjct: 367 SILRGLKEKYEVHHGVTISDAAIVAAANLAARYLTSRRLPDSAIDLIDEAAAAVRVARES 426 Query: 408 KPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKA 467 +PE +D L+R++ QLK+E AL +E DEASK RL+ ++ + E + L E+++ EK Sbjct: 427 QPEIIDSLERKLRQLKIEIHALSREKDEASKARLEQAKKDAENVEEELRPLREKYEQEKQ 486 Query: 468 SLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMR-- 525 Q + +LE + E+A R+GD +R ++LQY IPE E ++ + + Sbjct: 487 RAKALQEARMKLESLRQKAEEASRMGDHSRAADLQYYAIPEQEAVIKRLEKEKAAADAAL 546 Query: 526 ----------LLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNE 575 ++ + V +I E++ARWTGIPV+R+ SE+EKLL ME+ L V+GQ E Sbjct: 547 NAAAAETGGAMITDVVGPDQINEIVARWTGIPVTRLKTSEKEKLLHMEKHLSKIVVGQKE 606 Query: 576 AVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMS 635 AV +VSNAIR R+GL++PN+P SFLF GP+G GKT L KALA F+FD +AM+R DMS Sbjct: 607 AVQSVSNAIRLQRSGLSNPNQPP-SFLFCGPSGTGKTLLTKALAEFLFDDPKAMIRFDMS 665 Query: 636 EFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLD 695 E+ E+HS+SR++GAPPGYVG++ GG LTEA+RR+P+S++L DEVEKA +V +LLQ++D Sbjct: 666 EYQERHSLSRMIGAPPGYVGHDSGGQLTEALRRKPFSILLFDEVEKAAKEVLTVLLQLMD 725 Query: 696 DGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQ--ERFGELDYAHMKELVLGVVSHNFRPEF 753 DGR+TDGQGR VD RN +V+MTSNLG++ + +ELV+ + + F PEF Sbjct: 726 DGRITDGQGRVVDARNCIVVMTSNLGAEYLSRPNAKDGKIDPTTRELVMNALRNYFLPEF 785 Query: 754 INRIDEVVVFHPLGEQHIASIAQIQLKRLYKR--LEERGYEIHISDEALKLLSENGYDPV 811 +NRI +V+F+ L + I I ++++ + KR +R +I +S+EA L GY P Sbjct: 786 LNRISSIVIFNRLTRREIRKIVELRIAEIQKRLQDNDRNVKIEVSEEAKDKLGALGYSPA 845 Query: 812 YGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAV 856 YGARPL+R +++++ N LA IL G + G+V R+ V + +I + Sbjct: 846 YGARPLQRVLEKEVLNRLAVLILRGSIRDGEVARVVVQDGKITVL 890 >UniRef50_Q4UAC3 ClpB protein, putative n=8 Tax=cellular organisms RepID=Q4UAC3_THEAN Length = 1150 Score = 802 bits (2072), Expect = 0.0, Method: Composition-based stats. Identities = 404/1022 (39%), Positives = 591/1022 (57%), Gaps = 173/1022 (16%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 T+K A+ +A D+ ++E L+ +L+N + V +L + G+N L+ ++ Sbjct: 129 YTDKAWEAITSLTEIANEFDSSYVEGDMLLYSLINDDN--VLKVLNNLGLNVDNLKKELE 186 Query: 66 QALNRLPQVEGTGGDVQ-PSQDLVRVLNLCDKLAQKRG---------------------- 102 L + ++ G+ GD + + L VLN+ + + G Sbjct: 187 NHLKKQIRMSGSFGDRKILGRILENVLNISKRYKSEFGVSSITVLAHTATNPPKGSYIVP 246 Query: 103 -DNFISSELFVLAAL-ESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQA 160 D +IS E +L E L T + + +RG + + E+ + Sbjct: 247 LDKYISVEHLLLGLAAEDTKFFRPYLTKYKITLEKLKDTVLSIRGKRKITTRNTENSYKL 306 Query: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220 L K++ DLT+ A GKLDPVIGRD EIRRTI++L RRTKNNPVL+G+PGVGKTAI EGLA Sbjct: 307 LNKFSKDLTDMARNGKLDPVIGRDNEIRRTIEILSRRTKNNPVLLGDPGVGKTAIAEGLA 366 Query: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280 RI++G+VP+ LK R+V++LD+ A+VAG YRGEFEERLK +LN++ +G +++FIDE+ Sbjct: 367 NRIVSGDVPDSLKNRKVISLDIAAIVAGTMYRGEFEERLKEILNEIENSQGEIVMFIDEI 426 Query: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340 HT+VGAG++ G++DAGN+LKP LARGEL C+GATTL EYRQ IEKD ALERRFQ +++ E Sbjct: 427 HTLVGAGESQGSLDAGNILKPMLARGELRCIGATTLQEYRQKIEKDKALERRFQPIYIDE 486 Query: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400 P++E+TI ILRGLKERYE+HH V+I D ++ A LS+RYI DR LPDKAIDLIDEAA+ Sbjct: 487 PNIEETINILRGLKERYEVHHGVRILDSTLIQAVLLSNRYITDRYLPDKAIDLIDEAAAK 546 Query: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEA--------------SKKRLDMLNE 446 +++Q+ SKP +LD ++R+++QL++E+ +++ ++D K RL ++ Sbjct: 547 LKIQLSSKPLQLDIIERKLLQLEMEKISIINDNDNIGILSKNEKENLKPNDKLRLQNIDN 606 Query: 447 ELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKI 506 +++ +Q EL E W EK+ + + IK ++ KI I++A R DL +EL++ + Sbjct: 607 LVNELTKQKDELNEMWLKEKSLVDNIRNIKERIDIVKIEIDKAERDFDLNHAAELRFETL 666 Query: 507 PELEKQLEAATQ----------------------------------------LEGKTMRL 526 P+LE QL+ +E L Sbjct: 667 PDLENQLKTNINNYENYIKQVRYGVRSTATNTTNPPEGVLYSSFSYITTYIVMETGGNIL 726 Query: 527 LRNKVTDAEIAEVLARWT-------------------------------------GIPVS 549 LR+ VT +IA V+++WT GIP++ Sbjct: 727 LRDTVTKEDIANVVSKWTGVVRGSYILVVGSSVTVVIPFTWILSYRLTKHRNVVIGIPLN 786 Query: 550 RMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGV 609 ++++S++EK+L++ +ELH R+IGQ EA+DAV NA++RSR G+ DP +PI + +FLGPTGV Sbjct: 787 KLIKSQKEKILQLNEELHKRIIGQQEAIDAVVNAVQRSRVGMNDPKKPIAALMFLGPTGV 846 Query: 610 GKTELCKALANFMFDS---------------DEAMVRIDMSEFMEKHSVSRLVGAPPGYV 654 GKTEL KA+A +FDS +A++R DMSE+MEKHSVS+LVGAPPGY+ Sbjct: 847 GKTELSKAIAEQLFDSGITLRCLLPRPPTTTKDAIIRFDMSEYMEKHSVSKLVGAPPGYI 906 Query: 655 GYEEGGYLTEAVRRRPYSVILLDEV-------------------EKAHPDVFNILLQVLD 695 GYE+GG LTEA+RR+PYS++L DE+ H DV+NILLQVLD Sbjct: 907 GYEQGGLLTEAIRRKPYSILLFDEMYLHYGACSSPTGVLSYILKSTTHSDVYNILLQVLD 966 Query: 696 DGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD-YAHMKELVLGVVSHNFRPEFI 754 DGRLTD GR V+F N+++I TSNLGS I E + MK V+ V NF PEF+ Sbjct: 967 DGRLTDSLGRKVNFTNSLIIFTSNLGSQNILELARFPEKRNEMKNKVMTSVRQNFSPEFL 1026 Query: 755 NRIDEVVVFHPLG--------------------EQHIASIAQIQLKRLYKRLEERGYEIH 794 NRIDE +VF L ++ + I +++ +L RL E+ ++ Sbjct: 1027 NRIDEFIVFDSLTKIGTLRCSVTVLGHTVTNTPKRELKKIVNMEMMKLSNRLAEKNIKLS 1086 Query: 795 ISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIV 854 I D A+ +++ GYDP YGARPLKR IQ+QIE+P+A ILS + + + + ++ Sbjct: 1087 IDDAAMSHIADIGYDPAYGARPLKRTIQKQIESPIAVGILSDQYKEHDNLHISYKDGKLT 1146 Query: 855 AV 856 + Sbjct: 1147 IL 1148 >UniRef50_P37571 Negative regulator of genetic competence clpC/mecB n=137 Tax=Bacteria RepID=CLPC_BACSU Length = 810 Score = 799 bits (2063), Expect = 0.0, Method: Composition-based stats. Identities = 400/868 (46%), Positives = 558/868 (64%), Gaps = 78/868 (8%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M R T + Q LA AQ AL + I H++ L+ + G + L + G+ + ++ Sbjct: 1 MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSEKI 60 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL-ESR 119 + ++ + R ++ T + + +V+ L A+K G +++ +E +L + E Sbjct: 61 QKEVESLIGRGQEMSQT---IHYTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGE 117 Query: 120 GTLADILKAAGATTANITQAIEQM----RGGESVNDQGAEDQRQALKKYTIDLTERAEQG 175 G A +L G + Q + Q+ G S + L DLT A++ Sbjct: 118 GVAARVLNNLGVSLNKARQQVLQLLGSNETGSSAAGTNSNANTPTLDSLARDLTAIAKED 177 Query: 176 KLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGR 235 LDPVIGR +EI+R I+VL RRTKNNPVLIGEPGVGKTAI EGLAQ+IIN EVPE L+ + Sbjct: 178 SLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDK 237 Query: 236 RVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDA 295 RV+ LDMG +VAG KYRGEFE+RLK V++++ + GN+ILFIDELHT++GAG A+GA+DA Sbjct: 238 RVMTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQA-GNIILFIDELHTLIGAGGAEGAIDA 296 Query: 296 GNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKE 355 N+LKP+LARGEL C+GATTLDEYR+YIEKDAALERRFQ + V +PSV+++I IL+GL++ Sbjct: 297 SNILKPSLARGELQCIGATTLDEYRKYIEKDAALERRFQPIQVDQPSVDESIQILQGLRD 356 Query: 356 RYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRL 415 RYE HH V ITD AI AA LS RYI+DR LPDKAIDLIDEA S +R++ + P L L Sbjct: 357 RYEAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKEL 416 Query: 416 DRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTI 475 ++++ +++ E+ A ++ E++ + Q + Sbjct: 417 EQKLDEVRKEKDAAVQSQ---------------------------EFEKAASLRDTEQRL 449 Query: 476 KAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAE 535 + ++E K + + EKQ + +++ T + Sbjct: 450 REQVEDTKKSWK----------------------EKQGQENSEV------------TVDD 475 Query: 536 IAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPN 595 IA V++ WTG+PVS++ ++E +KLL ME LH RVIGQ+EAV AV+ A+RR+RAGL DP Sbjct: 476 IAMVVSSWTGVPVSKIAQTETDKLLNMENILHSRVIGQDEAVVAVAKAVRRARAGLKDPK 535 Query: 596 RPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVG 655 RPIGSF+FLGPTGVGKTEL +ALA +F +E+M+RIDMSE+MEKHS SRLVG+PPGYVG Sbjct: 536 RPIGSFIFLGPTGVGKTELARALAESIFGDEESMIRIDMSEYMEKHSTSRLVGSPPGYVG 595 Query: 656 YEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVI 715 Y+EGG LTE VRR+PYSV+LLDE+EKAHPDVFNILLQVL+DGRLTD +GRTVDFRNT++I Sbjct: 596 YDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILI 655 Query: 716 MTSNLGSDLIQERF--------GELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLG 767 MTSN+G+ ++ ++ MK+ V+G + FRPEFINRIDE++VFH L Sbjct: 656 MTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLE 715 Query: 768 EQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIEN 827 ++H+ I + +L KRL+E+ I ++D A ++E G D YGARPL+RAIQ+ +E+ Sbjct: 716 KKHLTEIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVED 775 Query: 828 PLAQQILSGELVPGKVIRLEVNEDRIVA 855 L++++L G + G+ I L+V + V Sbjct: 776 RLSEELLRGNIHKGQHIVLDVEDGEFVV 803 >UniRef50_P33416 Heat shock protein 78, mitochondrial n=49 Tax=Dikarya RepID=HSP78_YEAST Length = 811 Score = 791 bits (2043), Expect = 0.0, Method: Composition-based stats. Identities = 371/711 (52%), Positives = 520/711 (73%), Gaps = 7/711 (0%) Query: 151 DQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGV 210 D + ++ AL+++ +LT+ A GKLDPVIGRDEEI R IQ+L RRTKNNP LIG GV Sbjct: 88 DPNQQPEKPALEQFGTNLTKLARDGKLDPVIGRDEEIARAIQILSRRTKNNPCLIGRAGV 147 Query: 211 GKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQE 270 GKTA+++GLAQRI+ GEVP+ LK + ++ALD+G+L+AGAKYRGEFEERLK VL ++ K Sbjct: 148 GKTALIDGLAQRIVAGEVPDSLKDKDLVALDLGSLIAGAKYRGEFEERLKKVLEEIDKAN 207 Query: 271 GNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALE 330 G VI+FIDE+H ++G GK DG+MDA N+LKP LARG L C+ ATTLDE+ + IEKD AL Sbjct: 208 GKVIVFIDEVHMLLGLGKTDGSMDASNILKPKLARG-LRCISATTLDEF-KIIEKDPALS 265 Query: 331 RRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKA 390 RRFQ + + EPSV DTI+ILRGLKERYE+HH V+ITD A+V+AA LS+RYI DR LPDKA Sbjct: 266 RRFQPILLNEPSVSDTISILRGLKERYEVHHGVRITDTALVSAAVLSNRYITDRFLPDKA 325 Query: 391 IDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSD 450 IDL+DEA + +R+Q +SKP+E+ +LDR I+++++E ++L KE+D S +R + L ++L Sbjct: 326 IDLVDEACAVLRLQHESKPDEIQKLDRAIMKIQIELESLKKETDPVSVERREALEKDLEM 385 Query: 451 KERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELE 510 K + + L + W AE+A + + KA LEQA+I +E+ +R GD + SEL+Y +IP+LE Sbjct: 386 KNDELNRLTKIWDAERAEIESIKNAKANLEQARIELEKCQREGDYTKASELRYSRIPDLE 445 Query: 511 KQLE-AATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHR 569 K++ + +G + LL + VT +I++V+A+ TGIP +M+ ++++LL ME L R Sbjct: 446 KKVALSEKSKDGDKVNLLHDSVTSDDISKVVAKMTGIPTETVMKGDKDRLLYMENSLKER 505 Query: 570 VIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAM 629 V+GQ+EA+ A+S+A+R RAGL RPI SF+FLGPTG GKTEL KALA F+FD + + Sbjct: 506 VVGQDEAIAAISDAVRLQRAGLTSEKRPIASFMFLGPTGTGKTELTKALAEFLFDDESNV 565 Query: 630 VRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNI 689 +R DMSEF EKH+VSRL+GAPPGYV E GG LTEAVRR+PY+V+L DE EKAHPDV + Sbjct: 566 IRFDMSEFQEKHTVSRLIGAPPGYVLSESGGQLTEAVRRKPYAVVLFDEFEKAHPDVSKL 625 Query: 690 LLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK----ELVLGVV 745 LLQVLD+G+LTD G VDFRNT+++MTSN+G D++ D + V+ + Sbjct: 626 LLQVLDEGKLTDSLGHHVDFRNTIIVMTSNIGQDILLNDTKLGDDGKIDTATKNKVIEAM 685 Query: 746 SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSE 805 ++ PEFINRID+++VF+ L ++ + SI I++ + RL E+ +I ++DEA L++ Sbjct: 686 KRSYPPEFINRIDDILVFNRLSKKVLRSIVDIRIAEIQDRLAEKRMKIDLTDEAKDWLTD 745 Query: 806 NGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAV 856 GYD +YGARPL R I +QI N +A +L G++ G+ +R+ V + ++V + Sbjct: 746 KGYDQLYGARPLNRLIHRQILNSMATFLLKGQIRNGETVRVVVKDTKLVVL 796 >UniRef50_Q4FY62 Serine peptidase, putative n=12 Tax=cellular organisms RepID=Q4FY62_LEIMA Length = 817 Score = 790 bits (2039), Expect = 0.0, Method: Composition-based stats. Identities = 401/707 (56%), Positives = 518/707 (73%), Gaps = 1/707 (0%) Query: 151 DQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGV 210 + A + LKKY DLTE A G+LDP++GR+E IRRTIQV+ RRTKNNPVLIGEPGV Sbjct: 92 NPNAVPPGEFLKKYARDLTEEARTGRLDPIVGREEVIRRTIQVVSRRTKNNPVLIGEPGV 151 Query: 211 GKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQE 270 GKTAIVEGLAQRI+ GEVPE +K R+V ALDMG LVAGAK+RGEFEERLKGVL D + Sbjct: 152 GKTAIVEGLAQRIVKGEVPESIKDRQVYALDMGTLVAGAKFRGEFEERLKGVLKDTIESH 211 Query: 271 GNVILFIDELHTMVGAGKA-DGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAAL 329 G VILFIDELHT+VGAG + DG+MDA N+LKP+LARGELHC+GATTLDEYRQ+IEKDAAL Sbjct: 212 GKVILFIDELHTLVGAGSSGDGSMDAANLLKPSLARGELHCIGATTLDEYRQHIEKDAAL 271 Query: 330 ERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDK 389 RRFQ V V EP+VE+TI+ILRG+KE+YE HH I D A+V AA SHRY+++R+LPDK Sbjct: 272 ARRFQSVLVTEPTVEETISILRGIKEKYEAHHGCLIKDEALVYAAVNSHRYLSERRLPDK 331 Query: 390 AIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELS 449 AIDLIDEAAS +R+Q +SKPE LD ++R +I+LK+E +A+ K+ DE K++L+ L E++S Sbjct: 332 AIDLIDEAASRLRLQQESKPEALDLIERELIRLKIEAEAVKKDKDEVGKEKLENLYEQIS 391 Query: 450 DKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPEL 509 K+++Y LEE WK EK + EL+ + +EQA GD A+ E+Q+ +IP L Sbjct: 392 QKQKEYDALEERWKKEKNLFQTIKQRTEELDVLRHHLEQAMNSGDFAKAGEIQHSQIPNL 451 Query: 510 EKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHR 569 KQ+E L ++ + VT +IAEV+AR TGIPV+++M SEREKL+ M+ EL Sbjct: 452 LKQIEKDKHLASSKNFMVHDSVTSKDIAEVIARATGIPVAQLMTSEREKLIHMDAELKKT 511 Query: 570 VIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAM 629 ++GQ+ A+++++N +R SRAGL RP+GSFLFLGPTGVGKTE+CK+LA F+FD + + Sbjct: 512 IMGQDAAIESITNVVRISRAGLHSHKRPLGSFLFLGPTGVGKTEVCKSLAKFLFDDESFI 571 Query: 630 VRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNI 689 RIDMSE+ME+HSV RL+GAPPGYVGYEEGG LTE+VRRRPY ++L DE EKAHP V NI Sbjct: 572 CRIDMSEYMERHSVHRLIGAPPGYVGYEEGGELTESVRRRPYQIVLFDEFEKAHPSVSNI 631 Query: 690 LLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNF 749 LLQVLD+G LTD GR VDF+NT++I+TSN+G+D+I V+ V Sbjct: 632 LLQVLDEGHLTDSHGRRVDFKNTIIILTSNIGADVIARLPEGKPSISAMPAVMEQVRQRL 691 Query: 750 RPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYD 809 PEFINR+D++++F+ L + I SI +I ++ K L E + S E LS NGY Sbjct: 692 APEFINRLDDIIMFNRLSREDIRSIVEILFAQVQKMLTEHNITLEESTEVYDWLSVNGYS 751 Query: 810 PVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAV 856 VYGARPLKR +Q ++ N LA +L G + G+ +RL V + +V V Sbjct: 752 AVYGARPLKRLVQSELLNQLALMLLDGRVREGEHVRLSVQDGHVVVV 798 >UniRef50_A8B6K3 ClpB protein n=1 Tax=Giardia lamblia ATCC 50803 RepID=A8B6K3_GIALA Length = 882 Score = 787 bits (2033), Expect = 0.0, Method: Composition-based stats. Identities = 379/874 (43%), Positives = 568/874 (64%), Gaps = 27/874 (3%) Query: 5 RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDI 64 + TN Q + ++ ++ H + + H+ +AL + S + + +R I Sbjct: 6 KYTNDLQKVMTESIRVSQRHGHSLVNQYHIAAALFADDDSISSKAVQKCSGDVSAIRRAI 65 Query: 65 NQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLAD 124 L + P V P+ + ++N A++ D ++S+ AA + LA Sbjct: 66 ETGLKKTPSVTPVPDTPSPAGGYLGIINKMSAYAEEGRDEYLSTFHLAKAAAQDTD-LAR 124 Query: 125 ILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRD 184 L+ T+ + IE+M+ G S+N + AED +AL+KY +++ +AE+GK DP+I RD Sbjct: 125 CLREGRVTSNRFVEEIEKMKKGRSMNSEFAEDTCEALEKYCVEMVAKAEEGKYDPLIARD 184 Query: 185 EEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGA 244 E+RR +++L RRTKNNPVL G GVGKTAI+EGLAQRI+ +VP+ ++ R+ ALD+GA Sbjct: 185 NELRRIVEILSRRTKNNPVLTGPAGVGKTAILEGLAQRIVRADVPQNIRNARIYALDLGA 244 Query: 245 LVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALA 304 L+AGA+YRG+FEERLK +L++L K EGN ILFIDE+HT++GAG + G DA N+LKPALA Sbjct: 245 LIAGAQYRGQFEERLKAILDELKKSEGNSILFIDEIHTLIGAGGSKGTSDAANLLKPALA 304 Query: 305 RGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQ 364 RGE+ C+GATT +EYR +I D A ERRF +VFVAEP+VEDTI+ILRGL RY+ HH ++ Sbjct: 305 RGEIRCIGATTTEEYRNHIASDRAFERRFAEVFVAEPNVEDTISILRGLSGRYQSHHQIR 364 Query: 365 ITDPAIVAAATLSHRYIA--DRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQL 422 ITD A+VAAA L++RY+ R PD AIDL+DEA +S+R+ +DS+P +LD L+R+ ++L Sbjct: 365 ITDGALVAAAQLANRYVRAMGRHNPDAAIDLLDEAGASVRVTLDSQPAQLDALNRKKLRL 424 Query: 423 KLEQQALMKES-----DEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKA 477 ++E++AL +ES D + KRL + +E+S+ + Q LEE++ E++S+ IKA Sbjct: 425 QIEEEALRRESEARNADSSISKRLADIIKEISNIDMQIKPLEEQYNRERSSIDKISNIKA 484 Query: 478 ELEQAKIAIEQARRVGDLARMSELQYGKIPE-------LEKQLEAATQLEGKTMRLLRNK 530 + + +E G++++ ++LQYG IPE LEK+ EAA+ +L Sbjct: 485 RITALEDKLEVYTTRGEVSKAADLQYGAIPELRDELRRLEKEQEAASYAHHDEKAMLSAV 544 Query: 531 VTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590 VT+ E+A V+++WTGIPV+++ ++REKLL +EQ + +VIGQ AV AV ++I R+RAG Sbjct: 545 VTEMEVANVVSKWTGIPVNKLTRTDREKLLSLEQTISSKVIGQEPAVKAVCSSILRARAG 604 Query: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAP 650 L+ P +P+GSFLFLG +GVGKT L K +A ++DS ++M+ IDMSE+ E+HSVSRL+GAP Sbjct: 605 LSRPTQPLGSFLFLGSSGVGKTYLAKTIAEELYDSVDSMIHIDMSEYTEQHSVSRLIGAP 664 Query: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFR 710 PGYVGYE+ G LTEAV R+ Y+V+L DE+EKAHP + ILLQ+LD+GRLTDG+G VDF Sbjct: 665 PGYVGYEQAGQLTEAVSRKRYAVVLFDEIEKAHPKILTILLQILDEGRLTDGKGNCVDFT 724 Query: 711 NTVVIMTSNLGSDLIQE----RFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPL 766 NTV+++TSNLGS + + KE V+GVV PE INR+D+++VF+PL Sbjct: 725 NTVIMLTSNLGSRELLQCYHSNVSASQAKQAKEHVIGVVRSTLPPELINRLDDLIVFNPL 784 Query: 767 GEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQI 825 + + I + +L +R E G + + +A+ ++ D VYGARPL+R I+++I Sbjct: 785 TKDALVKIFRSLCGQLEERLQHESGLRLRVD-DAVADIALRDSDMVYGARPLRRFIEREI 843 Query: 826 ENPLAQQIL------SGELVPGKVIRLEVNEDRI 853 +A++++ + + + +D I Sbjct: 844 TTAVARKLIEVPSDARSNREKRRCVHVSAKDDGI 877 >UniRef50_C4R0B7 Oligomeric mitochondrial matrix chaperone n=48 Tax=cellular organisms RepID=C4R0B7_PICPG Length = 824 Score = 784 bits (2024), Expect = 0.0, Method: Composition-based stats. Identities = 386/718 (53%), Positives = 534/718 (74%), Gaps = 10/718 (1%) Query: 146 GESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLI 205 + + E++ AL+KY ++LT+ A+ GKLDPVIGRDEEIRRTIQ+L RRTKNNP LI Sbjct: 77 PQINMNGQQEEELPALQKYGVNLTQLAKDGKLDPVIGRDEEIRRTIQILSRRTKNNPALI 136 Query: 206 GEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLND 265 G G GKTAI+EGLAQRII GEVPE +K + V+ALD+G+L++GAK+RGEFEERLK VL + Sbjct: 137 GNAGTGKTAIMEGLAQRIIKGEVPESMKDKEVVALDLGSLISGAKFRGEFEERLKAVLKE 196 Query: 266 LAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEK 325 L + GN+ILFIDELH ++G GKA+G++DA N+LKPALARG+L C GATT++EYR+YIEK Sbjct: 197 LDEAHGNIILFIDELHILLGLGKAEGSIDASNLLKPALARGQLQCCGATTIEEYRKYIEK 256 Query: 326 DAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQ 385 DAAL RRFQ V V EPSV+D I+ILRGLKE+YE+HH V+ITD A+V AA S+RYI DR Sbjct: 257 DAALARRFQSVLVNEPSVQDAISILRGLKEKYEIHHGVRITDSALVTAAVYSNRYITDRF 316 Query: 386 LPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLN 445 LPDKAIDL+DEA S++R+Q +SKP+ + +LDR+I+ +++E ++L KE+D S +R D L+ Sbjct: 317 LPDKAIDLVDEACSALRLQHESKPDVIQQLDRQIMTIQIELESLRKETDPISVERRDKLD 376 Query: 446 EELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGK 505 E+L K+ + L + W+ EK SL +T K ELEQ+K+ +E+A+R GD + S L+Y K Sbjct: 377 EQLKLKKEELERLTQVWEDEKNSLEKIKTAKEELEQSKLELERAQREGDFGKASMLRYSK 436 Query: 506 IPELEKQLEAATQLEGK-----TMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLL 560 IPELE+++ A Q + T LL VT +IA V+++ TG+PV +M+ E++KLL Sbjct: 437 IPELEQKVSATAQRVKEGESETTTNLLHESVTSDDIAWVVSKMTGVPVQSLMKGEKDKLL 496 Query: 561 RMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALAN 620 ME+ + RVIGQ+EA+ +V++A+R RAGL + RPI SF+FLGPTG GKTEL K+LA Sbjct: 497 YMEESIKSRVIGQDEAIHSVADAVRLQRAGLTNEKRPIASFMFLGPTGTGKTELTKSLAE 556 Query: 621 FMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVE 680 F+F+ + A+VR DMSEF E+HS+SRL+GAPP YVG+EEGG LTEAVRR+PY+V+L DE E Sbjct: 557 FLFNDENAVVRFDMSEFQERHSLSRLIGAPPSYVGFEEGGELTEAVRRKPYAVVLFDEFE 616 Query: 681 KAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLI-----QERFGELDYA 735 KAH D+ ++LQ+LD+G LTD QG +DF+NT++IMTSNLG DL+ E G Sbjct: 617 KAHRDISKLMLQILDEGNLTDSQGHKIDFKNTIIIMTSNLGQDLLLADTELENVGGKVSE 676 Query: 736 HMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHI 795 K V+ V+ N+ PEFINR+D+V+VF+ L + + I I+L + RL +R E+ + Sbjct: 677 KTKNEVIQVMKQNYPPEFINRLDDVLVFNRLSRESLRKIVDIRLSEVQDRLVDRRIELKL 736 Query: 796 SDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRI 853 +D A + L+E GYDP+YGARPL R I++Q+ NPL+ +++ GE+ +++++ + + Sbjct: 737 TDAAKEWLTEKGYDPLYGARPLNRVIKKQLLNPLSIRLIQGEITNNSTVKVDLVDGDL 794 >UniRef50_P31539 Heat shock protein 104 n=15 Tax=Eukaryota RepID=HS104_YEAST Length = 908 Score = 781 bits (2016), Expect = 0.0, Method: Composition-based stats. Identities = 368/867 (42%), Positives = 556/867 (64%), Gaps = 22/867 (2%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGS----VSPLLTSAGINA 57 + T + L AQ LA H + ++P+H+++A + + L+ + Sbjct: 3 DQTQFTERALTILTLAQKLASDHQHPQLQPIHILAAFIETPEDGSVPYLQNLIEKGRYDY 62 Query: 58 GQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALE 117 + +N+ L R+PQ + ++ PS L +VL K+ +++ D+FI+ + + A Sbjct: 63 DLFKKVVNRNLVRIPQQQPAPAEITPSYALGKVLQDAAKIQKQQKDSFIAQDHILFALF- 121 Query: 118 SRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQR--QALKKYTIDLTERAEQG 175 + ++ I K A I Q ++RG ++ +GA+ + L KY ID+TE+A QG Sbjct: 122 NDSSIQQIFKEAQVDIEAIKQQALELRGNTRIDSRGADTNTPLEYLSKYAIDMTEQARQG 181 Query: 176 KLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGR 235 KLDPVIGR+EEIR TI+VL RR K+NP LIGEPG+GKTAI+EG+AQRII+ +VP L+G Sbjct: 182 KLDPVIGREEEIRSTIRVLARRIKSNPCLIGEPGIGKTAIIEGVAQRIIDDDVPTILQGA 241 Query: 236 RVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDA 295 ++ +LD+ AL AGAKY+G+FEER KGVL ++ + + ++LFIDE+H ++G GK DA Sbjct: 242 KLFSLDLAALTAGAKYKGDFEERFKGVLKEIEESKTLIVLFIDEIHMLMGNGK----DDA 297 Query: 296 GNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKE 355 N+LKPAL+RG+L +GATT +EYR +EKD A ERRFQK+ VAEPSV T+AILRGL+ Sbjct: 298 ANILKPALSRGQLKVIGATTNNEYRSIVEKDGAFERRFQKIEVAEPSVRQTVAILRGLQP 357 Query: 356 RYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRL 415 +YE+HH V+I D A+V AA L+ RY+ R+LPD A+DL+D + + + + DSKPEELD Sbjct: 358 KYEIHHGVRILDSALVTAAQLAKRYLPYRRLPDSALDLVDISCAGVAVARDSKPEELDSK 417 Query: 416 DRRIIQLKLEQQALMKESDEAS--KKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQ 473 +R++ +++E +AL ++ D S K RL + ++ + + + L + + EK Sbjct: 418 ERQLQLIQVEIKALERDEDADSTTKDRLKLARQKEASLQEELEPLRQRYNEEKHGHEELT 477 Query: 474 TIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLE------AATQLEGKTMRLL 527 K +L++ + A R D A ++L+Y IP+++KQ+E A + ++ Sbjct: 478 QAKKKLDELENKALDAERRYDTATAADLRYFAIPDIKKQIEKLEDQVAEEERRAGANSMI 537 Query: 528 RNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRS 587 +N V I+E AR TGIPV ++ ESE EKL+ ME++L V+GQ +A+ AVSNA+R S Sbjct: 538 QNVVDSDTISETAARLTGIPVKKLSESENEKLIHMERDLSSEVVGQMDAIKAVSNAVRLS 597 Query: 588 RAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLV 647 R+GLA+P +P SFLFLG +G GKTEL K +A F+F+ ++ M+R+D SE EK++VS+L+ Sbjct: 598 RSGLANPRQP-ASFLFLGLSGSGKTELAKKVAGFLFNDEDMMIRVDCSELSEKYAVSKLL 656 Query: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTV 707 G GYVGY+EGG+LT ++ +PYSV+L DEVEKAHPDV ++LQ+LDDGR+T GQG+T+ Sbjct: 657 GTTAGYVGYDEGGFLTNQLQYKPYSVLLFDEVEKAHPDVLTVMLQMLDDGRITSGQGKTI 716 Query: 708 DFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLG 767 D N +VIMTSNLG++ I + G K LV+G V +FRPEF+NRI +V+F+ L Sbjct: 717 DCSNCIVIMTSNLGAEFINSQQGSKIQESTKNLVMGAVRQHFRPEFLNRISSIVIFNKLS 776 Query: 768 EQHIASIAQIQLKRLYKRL--EERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQI 825 + I I I+LK + +R ++ Y+++++ EA L++ GY GARPL R IQ +I Sbjct: 777 RKAIHKIVDIRLKEIEERFEQNDKHYKLNLTQEAKDFLAKYGYSDDMGARPLNRLIQNEI 836 Query: 826 ENPLAQQILSGELVPGKVIRLEVNEDR 852 N LA +IL E+ + + + + + + Sbjct: 837 LNKLALRILKNEIKDKETVNVVLKKGK 863 >UniRef50_C9KP02 Negative regulator of genetic competence ClpC/MecB n=3 Tax=cellular organisms RepID=C9KP02_9FIRM Length = 840 Score = 779 bits (2012), Expect = 0.0, Method: Composition-based stats. Identities = 392/876 (44%), Positives = 544/876 (62%), Gaps = 87/876 (9%) Query: 4 DRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTD 63 + T++ A+ AQ A + +I H++ LL++EG L +AG+ + Sbjct: 5 NHFTSRAIKAIEFAQYAARELEQDYIGTEHILLGLLHEEGSVAFAALQAAGLTFDAVMQR 64 Query: 64 INQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES-RGTL 122 + + E + + RV+ + AQ G N+I +E +L+ LE G Sbjct: 65 VEAMVA--GDAEYPSDNPYYTPRAKRVMEGAVEEAQTLGHNYIGTEHILLSLLEETEGAA 122 Query: 123 ADILKAAGATTANITQAI---------EQMRGGESVNDQGAEDQRQALKKYTIDLTERAE 173 A++L G + + E Q +KKY +L + A+ Sbjct: 123 AELLIGMGVDIDALQGEVLDRIDHPHPEGDGEPSRAEKAKGRQAPQLIKKYGRNLNDMAK 182 Query: 174 QGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLK 233 + ++DPVIGRD+EI+R IQ+L RRTKN P+L+GEPGVGKTAI EGLAQRI+ G VP L+ Sbjct: 183 EDRMDPVIGRDKEIQRVIQILARRTKNTPILLGEPGVGKTAIAEGLAQRIVEGSVPYMLQ 242 Query: 234 GRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAM 293 ++V++L + +LVAGAKYRGEFEERLKG+++++ +Q+G +ILFIDE+HT+VGAG A+GA+ Sbjct: 243 DKKVVSLSLASLVAGAKYRGEFEERLKGLIDEV-RQDGTIILFIDEMHTLVGAGAAEGAL 301 Query: 294 DAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGL 353 DA N+LKPAL+RGE+ +GATTLDEY++++EKDAAL RRFQ + V EPS+ED IL GL Sbjct: 302 DAANILKPALSRGEIQIIGATTLDEYKKHLEKDAALSRRFQTILVEEPSIEDAKKILMGL 361 Query: 354 KERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELD 413 + +YE H I D AI AA LSHRYI DR LPDKAIDL+DEAAS +RM+ ++PE+L Sbjct: 362 RGKYEAFHCAHIEDAAIEAAVRLSHRYITDRFLPDKAIDLMDEAASKVRMKQVAQPEKLQ 421 Query: 414 RLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQ 473 + R+ +L +E++A + D ++ Q Sbjct: 422 EIRARLEKLGVEKEAAISAQD---------------------------YERAARIRDDEQ 454 Query: 474 TIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTD 533 +K ELE+AK E+ + + Sbjct: 455 KVKDELEEAKRRFEKRGKSRITVTADD--------------------------------- 481 Query: 534 AEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLAD 593 IA+V+A+WTG+PV ++ E ++LL ME+ L RV+GQ EAV+AVS AIRR+RAGL D Sbjct: 482 --IADVVAQWTGVPVRQIAAKESDRLLHMEKILTRRVVGQQEAVEAVSKAIRRARAGLKD 539 Query: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGY 653 P RPIGSFLFLGPTGVGKTEL KAL+ +F +++A++R DMSE+MEK++VSR+VGAPPGY Sbjct: 540 PKRPIGSFLFLGPTGVGKTELAKALSEALFGTEDAIIRFDMSEYMEKYAVSRMVGAPPGY 599 Query: 654 VGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTV 713 VGYEEGG LT+AVRR+PYS+ILLDE+EKAHPDVFN+LLQVLDDGRLTDG+GRTVDFRNTV Sbjct: 600 VGYEEGGQLTDAVRRKPYSIILLDEIEKAHPDVFNVLLQVLDDGRLTDGKGRTVDFRNTV 659 Query: 714 VIMTSNLGSDLIQERFGELDYA------------HMKELVLGVVSHNFRPEFINRIDEVV 761 +IMTSN G+ L+++ L +A K+ VLG V H F+PEF+NRIDE++ Sbjct: 660 IIMTSNAGATLLKKSAPALGFAVGSGDEKQEAEDAAKKRVLGEVRHIFKPEFLNRIDELI 719 Query: 762 VFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAI 821 VFHPLG + ++ I I L+ + RL E+ + +S A +L E G D YGARPLKRAI Sbjct: 720 VFHPLGREELSKIIDILLRDVRTRLAEKEIRLEVSPAAKNVLVEKGTDFKYGARPLKRAI 779 Query: 822 QQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857 Q+ IE+ +A+ +L+ + G I++ N ++ V+ Sbjct: 780 QKLIEDEIAEHLLARDFKRGDTIQVRKNGAKLDFVR 815 >UniRef50_Q4L3I4 ATP-dependent Clp protease ATP-binding subunit clpC n=90 Tax=Bacteria RepID=CLPC_STAHJ Length = 824 Score = 770 bits (1988), Expect = 0.0, Method: Composition-based stats. Identities = 379/866 (43%), Positives = 533/866 (61%), Gaps = 78/866 (9%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M RLT + Q LA AQ A+ ++ I HL+ L+ + G + +L S I ++ Sbjct: 1 MLFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKV 60 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL-ESR 119 ++ + + + G + + +V+ L A+K NF+ +E +L + E+ Sbjct: 61 IEEVEKLIG---HGQDQTGTLHYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENE 117 Query: 120 GTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQA----LKKYTIDLTERAEQG 175 G A + + + G ++++ A + L DLT A+ G Sbjct: 118 GVAARVFANLDLNITKARAQVVKALGSPEMSNKNATANKSNNTPTLDGLARDLTVIAKDG 177 Query: 176 KLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGR 235 LDPV+GRD+EI R I+VL RRTKNNPVLIGEPGVGKTAI EGLAQ I+N EVPE LKG+ Sbjct: 178 TLDPVVGRDKEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKGK 237 Query: 236 RVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDA 295 RV++LDMG +VAG KYRGEFEERLK V+ ++ + GNVILFIDELHT+VGAG A+GA+DA Sbjct: 238 RVMSLDMGTVVAGTKYRGEFEERLKKVMEEIHQA-GNVILFIDELHTLVGAGGAEGAIDA 296 Query: 296 GNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKE 355 N+LKPALARGEL C+GATTLDEYR+ IEKDAALERRFQ + V EP+VEDTIAIL+GL++ Sbjct: 297 SNILKPALARGELQCIGATTLDEYRKNIEKDAALERRFQPIQVDEPTVEDTIAILKGLRD 356 Query: 356 RYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRL 415 RYE HH + I+D A+ AAA LS Y++DR LPDKAIDLIDEA+S +R++ + P L + Sbjct: 357 RYEAHHRINISDEALEAAAKLSDCYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEI 416 Query: 416 DRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTI 475 ++ I ++K E+ A + + + L ++ + E+QY + + EWK + S + + Sbjct: 417 EQEIEKVKNEKDAAVHAQEFENAAN---LRDKQTKLEKQYEDAKNEWKTTQGDQSTSLS- 472 Query: 476 KAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAE 535 K ++ + L +++E + ++ LE+ L + + + V Sbjct: 473 KEDIGEVIAGWTGIP----LTKINETESDRLLNLEQTLHDRVIGQNDAVTSISKAV---- 524 Query: 536 IAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPN 595 RR+RAGL DP Sbjct: 525 -------------------------------------------------RRARAGLKDPK 535 Query: 596 RPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVG 655 RPIGSF+FLGPTGVGKTEL +ALA MF ++AM+R+DMSEFMEKH+VSRLVGAPPGYVG Sbjct: 536 RPIGSFIFLGPTGVGKTELARALAESMFGEEDAMIRVDMSEFMEKHAVSRLVGAPPGYVG 595 Query: 656 YEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVI 715 ++EGG LTE VRR+PYSVIL DE+EKAHPDVFNILLQVLDDG LTD +GR VDFRNTV+I Sbjct: 596 HDEGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRQVDFRNTVII 655 Query: 716 MTSNLGSDLIQER--------FGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLG 767 MTSN+G+ +Q++ DY +++ ++ + ++FRPEF+NR+D+++VFH L Sbjct: 656 MTSNVGAQELQDQRFAGFGGGSEGHDYETIRKTMMKELKNSFRPEFLNRVDDIIVFHKLS 715 Query: 768 EQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIEN 827 + + I + + +L +RL E+ I ++D+A + ++E GYDP YGARPL RAIQ+ +E+ Sbjct: 716 KDELKEIVTMMVNKLTQRLSEQDINIVVTDKAKEKIAEEGYDPEYGARPLIRAIQKTVED 775 Query: 828 PLAQQILSGELVPGKVIRLEVNEDRI 853 L++ IL G + GK + ++ + D Sbjct: 776 NLSELILDGNQIEGKEVVIDHDGDEF 801 >UniRef50_Q47KW3 ATPase n=56 Tax=root RepID=Q47KW3_THEFY Length = 830 Score = 766 bits (1977), Expect = 0.0, Method: Composition-based stats. Identities = 365/869 (42%), Positives = 535/869 (61%), Gaps = 82/869 (9%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 +R T++ + + AQ A ++ +I H++ L+++ G + L S GI+ +R Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL-ESRG 120 + + + + + G + + +VL L + A + G N+I +E +L + E G Sbjct: 61 QQVEEIIGQG--QQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEG 118 Query: 121 TLADILKAAGATTANITQAIEQMRGGESVND--------QGAEDQRQALKKYTIDLTERA 172 A +L GA + Q + Q+ G + + A L ++ +LT+ A Sbjct: 119 VAAQVLVKLGADLNRVRQQVIQLLHGYQGKEPQAAGTAAESAPSTSLVLDQFGRNLTQAA 178 Query: 173 EQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGL 232 +GKLDPVIGRD+EI R +QVL RRTKNNPVL+G+PGVGKTA+VEGLAQ+I+ GE+PE L Sbjct: 179 REGKLDPVIGRDKEIERVMQVLSRRTKNNPVLVGDPGVGKTAVVEGLAQKIVKGEIPETL 238 Query: 233 KGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGA 292 K +++ LD+GALVAG++YRG+FEERL+ VL ++ + G++ILFIDELHT+VGAG A+GA Sbjct: 239 KDKQLYTLDLGALVAGSRYRGDFEERLRKVLKEI-RSRGDIILFIDELHTLVGAGAAEGA 297 Query: 293 MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRG 352 +DA ++LKP LARGEL +GATTLDEYR+Y+EKDAALERRFQ + V EP++ TI IL+G Sbjct: 298 IDAASILKPMLARGELQTIGATTLDEYRKYLEKDAALERRFQPIQVEEPTISHTIEILKG 357 Query: 353 LKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEEL 412 L++RYE HH V ITD A+VAAA L+ RYI+DR LPDKAIDLIDEA S +R++ + P +L Sbjct: 358 LRDRYEAHHRVSITDGALVAAAQLADRYISDRYLPDKAIDLIDEAGSRMRIRRMTAPPDL 417 Query: 413 DRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGT 472 D +I +++ +++A + D R L +E + Q ++ E+EWKA Sbjct: 418 REFDEKIAKVRRDKEAAIDAQDFE---RAAALRDEEKRLQAQRAQKEKEWKAG-----DM 469 Query: 473 QTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVT 532 T+ E+ + + R++E + ++ +E++L + ++ L + Sbjct: 470 DTVAEVNEELIAEVLATATGIPVFRLTEEESSRLLRMEEELHKRVIGQDDAIKALSQAI- 528 Query: 533 DAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLA 592 RR+RAGL Sbjct: 529 ----------------------------------------------------RRTRAGLK 536 Query: 593 DPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPG 652 DP RP GSF+F GP+GVGKTELCKALA F+F ++A++++DMSEFMEKH+VSRL G+PPG Sbjct: 537 DPKRPGGSFIFAGPSGVGKTELCKALAEFLFGDEDALIQLDMSEFMEKHTVSRLFGSPPG 596 Query: 653 YVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNT 712 YVGYEEGG LTE VRR+P+SV+L DE+EKAH D+FN LLQVL++GRLTD QGR VDF+NT Sbjct: 597 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHGDIFNSLLQVLEEGRLTDAQGRNVDFKNT 656 Query: 713 VVIMTSNLGSDLIQE---------RFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVF 763 +++MT+NLG+ I + + Y MK V + +FRPEF+NR+D+ +VF Sbjct: 657 IIVMTTNLGTRDISKGQPMGFARPDDTQTTYDRMKAKVNEELKQHFRPEFLNRVDDTIVF 716 Query: 764 HPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQ 823 H L ++ I +I + + RL +RL++R I + A K+L+E GYDPV GARPL+R IQ+ Sbjct: 717 HQLTQKEITAIVDLMVARLDERLKDRDMGIEVRPHAKKILAERGYDPVLGARPLRRTIQR 776 Query: 824 QIENPLAQQILSGELVPGKVIRLEVNEDR 852 +IE+ L+++IL GEL G+++ ++ + Sbjct: 777 EIEDALSEKILYGELKSGQIVIVDAEGEG 805 >UniRef50_A4E9C6 Putative uncharacterized protein n=3 Tax=Collinsella RepID=A4E9C6_9ACTN Length = 880 Score = 764 bits (1972), Expect = 0.0, Method: Composition-based stats. Identities = 354/890 (39%), Positives = 527/890 (59%), Gaps = 98/890 (11%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 LDR T++ + ++ A+ AL + + HL+ AL ++ G + L S I+ + Sbjct: 1 MLDRFTDRARKVMSMAKQEALDLHSNKVGTEHLLLALAKEDEGIAAEALRSLDISYDDIM 60 Query: 62 TDINQALNRLPQV--EGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES- 118 + + +P+ E + + ++ V+ ++A++ ++S+E ++ +E Sbjct: 61 DTLKEVQTTVPEPSEETEAAKLAFTPLVISVMERSFRVARENNQTYVSTEHLLIGIVEEG 120 Query: 119 RGTLADILKAAGATTANITQAIEQMRGGESVN------------------------DQGA 154 G DIL G ++A+I +AIE++ + Q Sbjct: 121 NGMAMDILMRLGVSSASIKKAIEKLTAKDQDKKRPLAGAGAGRPGAGLPFFSGSDASQQK 180 Query: 155 EDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214 + LK++ +LT++A G+LDPVIGR++E++R +++L RRTKNNP+++G+PGVGKTA Sbjct: 181 GSGTETLKQFATNLTQKARDGELDPVIGREKEVQRMMEILSRRTKNNPLILGDPGVGKTA 240 Query: 215 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 274 IVEGLAQ+I G VPE L + + LD+ LVAGAKYRGEFEERLK V+ + + + +VI Sbjct: 241 IVEGLAQQIAAGNVPENLMNQNIWTLDLPGLVAGAKYRGEFEERLKNVIQEATEAD-DVI 299 Query: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334 LFIDE+HT++GAG A+G++DA +MLKP LARG +GATT +E+R+Y+ KD A ERRFQ Sbjct: 300 LFIDEMHTIIGAGSAEGSIDASSMLKPVLARGAFQIIGATTAEEFRKYLTKDPAFERRFQ 359 Query: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394 + V EPSVEDT+ IL LK RYE HHHV+ T AI AAA LS+RYI DR LPDKAIDLI Sbjct: 360 TIDVEEPSVEDTVKILTALKPRYEEHHHVRYTQGAIEAAANLSNRYIQDRFLPDKAIDLI 419 Query: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQ 454 DEA + R+ + PE + + R+ +LK A + ++ + + E+ E + Sbjct: 420 DEAGARARIAANRAPEPVREAEHRVEELKA---AAQEATESDDMNKAAEITEQQKAAEIE 476 Query: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLE 514 +E + W A ++ + D+++++++ Sbjct: 477 LAEAKAAWTA--------------------ELDASPLTIDVSQIADI------------- 503 Query: 515 AATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574 ++ +G+PVS + ESE +LL+ E L R+IGQ+ Sbjct: 504 -------------------------VSVTSGVPVSSLTESESRRLLQAESVLKTRIIGQD 538 Query: 575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 634 EAV+AV+ A+RRSR+ L DP RP GSF+FLGPTG GKTEL K LA ++F S +A++ DM Sbjct: 539 EAVEAVAKAVRRSRSPLKDPRRPGGSFIFLGPTGTGKTELAKTLAEYLFGSKDALISFDM 598 Query: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694 SEF + VS+L+G+PPGYVG++EGG LT+AVRR PYSV+L DE+EKAHPD+FNILLQVL Sbjct: 599 SEFGSEFEVSKLIGSPPGYVGHDEGGQLTKAVRRHPYSVVLFDEIEKAHPDIFNILLQVL 658 Query: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERF---------GELDYAHMKELVLGVV 745 ++GRLTD QG+TVDFRNTV+IMTSN+G+ I + L + +K +G + Sbjct: 659 EEGRLTDSQGKTVDFRNTVIIMTSNVGAREIAQDASVGFGTTGEQGLTSSEIKGRAMGEL 718 Query: 746 SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSE 805 FRPE +NRID++VVF L +++ IA + + L +RL G I ++D A + Sbjct: 719 KRLFRPELLNRIDDIVVFQKLSGENLTKIAHLLVDDLRQRLIANGMNIKLTDAAYDKIVA 778 Query: 806 NGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855 G D GARPL+RAIQ+ IE+PL++++L+GE G + +V + + V Sbjct: 779 EGTDLTNGARPLRRAIQKLIEDPLSEELLAGEWGEGDTVLCDVADGKFVF 828 >UniRef50_Q025Q2 ATPase AAA-2 domain protein n=12 Tax=Bacteria RepID=Q025Q2_SOLUE Length = 823 Score = 759 bits (1961), Expect = 0.0, Method: Composition-based stats. Identities = 358/864 (41%), Positives = 518/864 (59%), Gaps = 77/864 (8%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 +R T K + + A+ A + +IE HL+ LL ++ + L S +R Sbjct: 1 MFERYTEKARRVIFFARYEASQFGSPYIETEHLLLGLLREDKALANRFLRS-HAAVESIR 59 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL-ESRG 120 I + + T D+ S + RVL + A++ I +E +L L E + Sbjct: 60 KQIEGH-TTIREKVSTSVDLPLSHECKRVLAYGAEEAERLSHKHIGTEHLLLGLLREEKC 118 Query: 121 TLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPV 180 A+IL G + I + + + + + + + + L +++ DLT+ A LDP+ Sbjct: 119 FAAEILHERGLRLSTIREELARSQSEKVASAR--PKESSLLAEFSRDLTQAAMDNTLDPL 176 Query: 181 IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL 240 IGRD E+ R +Q+L RRTKNNPVLIGEPGVGKTAIVEGLAQRI G+VP L +R+LAL Sbjct: 177 IGRDYELERVVQILCRRTKNNPVLIGEPGVGKTAIVEGLAQRIAEGDVPSFLADKRILAL 236 Query: 241 DMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLK 300 D+ +VAG KYRG+FEERLK ++ +L + + N I+FIDELHT+VGAG A+G++DA N+LK Sbjct: 237 DLSLIVAGTKYRGQFEERLKTIMKELMENQ-NAIIFIDELHTLVGAGSAEGSLDAANILK 295 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELH 360 PAL+RGE+ C+GATT E+R+ IEKD +LERRFQ V V P+ D I IL G+K+RYE Sbjct: 296 PALSRGEIQCIGATTPAEFRKSIEKDRSLERRFQAVKVPPPNESDAIKILFGIKDRYEKF 355 Query: 361 HHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRII 420 H V TD AI AA S RYI DR LPDKAIDLIDEA + ++++ + P +L + +RI Sbjct: 356 HAVAYTDDAIEAAVYTSSRYIPDRYLPDKAIDLIDEAGARVKLRQTTLPADLADIQKRI- 414 Query: 421 QLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELE 480 K + + +++ E + + + Sbjct: 415 -----------------KFIVHRMENAIANHEFEKARFYS-------------------D 438 Query: 481 QAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVL 540 + + E R + + + + G VT +I +V+ Sbjct: 439 EERKERENMRLLREKYNLDDSSTG-------------------------CVTKDDIEDVV 473 Query: 541 ARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGS 600 ARWTG+P++ + E E KLLR+E+ELH RVI Q +A+ A++ AIRRSRAGL NRP GS Sbjct: 474 ARWTGVPMTSIKEEEIAKLLRIEEELHKRVISQEKAISALARAIRRSRAGLKASNRPAGS 533 Query: 601 FLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG 660 FLFLGPTGVGKTE+ +ALA F+F S++++VR DMSE+MEKHSVS+L+G+PPGYVGYEEGG Sbjct: 534 FLFLGPTGVGKTEVARALAGFLFGSEKSLVRFDMSEYMEKHSVSKLIGSPPGYVGYEEGG 593 Query: 661 YLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL 720 LTE V+R PYS+ILLDE+EKAHPD++NILLQV +DG+LTDG G VDF+NT++IMTSNL Sbjct: 594 QLTERVKRNPYSIILLDEIEKAHPDIYNILLQVFEDGQLTDGLGNQVDFKNTIIIMTSNL 653 Query: 721 GSDLIQER--------FGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIA 772 G+ +++R GE ++++V V F PEF+NR+DEV++F L + + Sbjct: 654 GARFLEKRGNLGFSIPAGEAGSTKVEDMVRSEVKKAFNPEFLNRLDEVILFMSLTDPDLI 713 Query: 773 SIAQIQLKRLYKRLEERGYEIHISDEALKLLSEN-GYDPVYGARPLKRAIQQQIENPLAQ 831 I ++ ++++ L + +IH++ +A K + E D YGARPL+RA+Q+ IE+PL++ Sbjct: 714 QIMELLVQQVNVNLVAKQVKIHLAPDAAKYILEKTCADRSYGARPLRRALQKYIEDPLSE 773 Query: 832 QILSGELVPGKVIRLEVNEDRIVA 855 ++ G L + + + + I Sbjct: 774 ALIQGTLPRPADLEVYLGDTGIYY 797 >UniRef50_D1HM97 Whole genome shotgun sequence of line PN40024, scaffold_108.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1HM97_VITVI Length = 875 Score = 758 bits (1957), Expect = 0.0, Method: Composition-based stats. Identities = 390/848 (45%), Positives = 543/848 (64%), Gaps = 100/848 (11%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 T A+ + +A + +Q +E HLM ALL Q+ G + + AG++ +L + Sbjct: 86 FTEMAWQAIVSSPEVAKENKHQIVETEHLMKALLEQKNGLARRIFSKAGVDNTRLLDATD 145 Query: 66 QALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADI 125 + + R P+V G +DL ++ + ++ GD+F+S E VLA ++ + + Sbjct: 146 KFIQRQPKVIGESAGSMLGRDLESLIQRAREYKKEYGDSFVSVEHLVLAFVQDQRFGKQL 205 Query: 126 LKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDE 185 K + + AIE +RG + V DQ E + +AL+KY DLT A+ GKLDPVIGRD+ Sbjct: 206 FKDFQISQKALKSAIEAIRGRQQVIDQDPEGKYEALEKYGKDLTAMAKAGKLDPVIGRDD 265 Query: 186 EIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGAL 245 EIRR IQ+L RRTKNNPVLIGEPGVGKTAI EGLAQRI+ G+VP+ L R++++LDMGAL Sbjct: 266 EIRRCIQILSRRTKNNPVLIGEPGVGKTAISEGLAQRIVQGDVPQALMNRKLISLDMGAL 325 Query: 246 VAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALAR 305 +AGAK+RGEFE+RLK VL ++ + +G ILFIDE+HT+VGAG +GAMDAGN+LKP L R Sbjct: 326 IAGAKFRGEFEDRLKAVLKEVTESDGQTILFIDEIHTVVGAGATNGAMDAGNLLKPMLGR 385 Query: 306 GELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQI 365 GEL C+GATTLDEYR+YIEKD ALERRFQ+V+V +P+VEDTI+ILRGL+ERYELHH V+I Sbjct: 386 GELRCIGATTLDEYRKYIEKDPALERRFQQVYVDQPTVEDTISILRGLRERYELHHGVRI 445 Query: 366 TDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLE 425 +D A+V AA LS RYI+ R LPDKAIDL+DEAA+ ++M+I SKP LD ++R +++L++E Sbjct: 446 SDSALVEAAILSDRYISGRFLPDKAIDLVDEAAAKLKMEITSKPTALDEINRSVLKLEME 505 Query: 426 QQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIA 485 + +L ++D+ASK RL L ELS + + +EL E+W+ EK+ ++ Q+IK E+++ + Sbjct: 506 RLSLTNDTDKASKDRLSRLEAELSLLKEKQAELSEQWEHEKSVMTRLQSIKEEIDRVNLE 565 Query: 486 IEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMR----LLRNKVTDAEIAEVLA 541 I+QA R DL R +EL+YG + L++QLE A + + M+ +LR +VT +IAE+++ Sbjct: 566 IQQAEREYDLNRAAELKYGSLNSLQRQLENAEKELDEYMKSGKSMLREEVTGNDIAEIVS 625 Query: 542 RWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSF 601 L+DP+RPI SF Sbjct: 626 -------------------------------------------------LSDPHRPIASF 636 Query: 602 LFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGY 661 +F+GPTGVGKTEL KALA++MF+++EA+ EGG Sbjct: 637 MFMGPTGVGKTELAKALASYMFNTEEAL----------------------------EGGQ 668 Query: 662 LTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLG 721 LTE VRRRPY+VIL DE+EKAH DVFN+ LQ+LDDGR+TD QGRTV F NTV+IMTSN Sbjct: 669 LTETVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSN-- 726 Query: 722 SDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKR 781 + V+ FRPEF+NR+DE +VF PL I+SI ++QL+R Sbjct: 727 -----------------QRVMDAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVKLQLER 769 Query: 782 LYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPG 841 + RL +R ++ +++ A++LL GYDP YGARP+KR IQQ +EN LA+ IL GE Sbjct: 770 VQLRLADRKMKLQVTETAIQLLGSLGYDPNYGARPVKRVIQQNVENELAKGILRGEFKDE 829 Query: 842 KVIRLEVN 849 + ++ Sbjct: 830 DTVLIDTE 837 >UniRef50_Q8DTC7 Chaperone protein clpB n=2 Tax=Streptococcus mutans RepID=CLPB_STRMU Length = 860 Score = 757 bits (1954), Expect = 0.0, Method: Composition-based stats. Identities = 356/860 (41%), Positives = 546/860 (63%), Gaps = 13/860 (1%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 +D++T + +L +A+ LA+ H N ++ HL + L+ + + S IN QL Sbjct: 1 MIDKMTQLVEDSLEEAKELAIAHRNYQLDIPHLWAVLVKPDQFAF-QFYQSLEINTNQLI 59 Query: 62 TDINQALNRLPQVEGTGGDVQ---PSQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL-E 117 IN+ ++++P + T SQ L +L+ + D ++ E +LA + Sbjct: 60 EIINKEIDKIPVLSSTEKSSYARLYSQRLKNLLDDAHQEMIDLKDQVLTVEHLILALFNQ 119 Query: 118 SRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKL 177 R + L G + Q + ++R G+ E AL+KY ++L +RA + Sbjct: 120 QRNPITVFLLEQGLNKEKLYQKMHRIRKGKPAISSSQETIYDALEKYAVNLNQRALDEPV 179 Query: 178 DPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRV 237 + +IGR +E+ I++L R+ KNN VL+G GVGKTAI+EG QR++ +VP+ L+G+ + Sbjct: 180 NKIIGRQDEMNDIIRILSRKNKNNAVLVGHSGVGKTAIIEGFVQRLVKNQVPKNLQGKVI 239 Query: 238 LALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGN 297 +LD+GAL+AG KYRGEFEER K +LND+ G +ILFIDE+H++V AG+ +G++DA + Sbjct: 240 YSLDIGALLAGTKYRGEFEERFKALLNDIIDSNGQIILFIDEIHSIVSAGRTEGSVDAAS 299 Query: 298 MLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERY 357 +LKP LARG++ +G+TT EYR+ IE D ALERRFQ++ V EP ++ T+ IL+GLK Y Sbjct: 300 ILKPLLARGKIRIIGSTTHAEYRESIEYDRALERRFQRILVHEPDLDYTMEILKGLKPIY 359 Query: 358 ELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDR 417 E H V++ + + AAA+LS RYI+DR LPDKA+DLIDEA ++ R+ + P ++ L + Sbjct: 360 ENFHGVRLEEDGLEAAASLSKRYISDRFLPDKALDLIDEACAAKRLASHAYPVQMTNLSQ 419 Query: 418 RIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKA 477 ++I E+ L++ +D + + LN L E Q S+L W+ E+ L Q +++ Sbjct: 420 QLIS---EKIRLLRLTDSDTDDKFK-LNNHLEQLEEQKSQLLANWQRERELLDQVQELRS 475 Query: 478 ELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIA 537 L + A +A L+ +I + +++ A + + +++ VT +IA Sbjct: 476 HLTALEEQANLALENNQVADYVRLEDEEIRKCHQKMTALEKERLDSQKIINVTVTREDIA 535 Query: 538 EVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRP 597 V+ R TGI V +ME+ER++LL +E+ LH +++GQ++AV VS AI RSRAG+ +P RP Sbjct: 536 AVVERLTGIKVQGVMENERDRLLHLEELLHQKIVGQDQAVQKVSQAIIRSRAGIQNPKRP 595 Query: 598 IGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYE 657 IGSFLFLGPTGVGKT L K LA +F S+ MVR+DMSE+MEKH+VSRLVG PPGYVGYE Sbjct: 596 IGSFLFLGPTGVGKTALAKRLAEVLFGSELEMVRLDMSEYMEKHAVSRLVGPPPGYVGYE 655 Query: 658 EGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMT 717 EGG LTEAVR+R YS++LLDE+EKAHPDVFN LLQVLD+GRLTD +GRT+DF+NT++IMT Sbjct: 656 EGGQLTEAVRQRLYSIVLLDEIEKAHPDVFNTLLQVLDEGRLTDSKGRTIDFKNTILIMT 715 Query: 718 SNLGSDLIQERFGELD--YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIA 775 SN+GS I + + + ++ VL ++H+FRPEF+NRIDE V+F+ L E+ + + Sbjct: 716 SNIGSTNILQSLQDSGCITSEVRYKVLDELNHSFRPEFLNRIDETVLFNALSEKDMTGVV 775 Query: 776 QIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILS 835 ++ + L RL E+ + +++ LL++ G+D +GARP++R I Q++ENPLA ++ Sbjct: 776 KVMVSDLQARLLEQDIHLTLTESVYILLAKEGFDAAFGARPMQRTIMQKLENPLALYLIQ 835 Query: 836 GELVPGKV--IRLEVNEDRI 853 + K + + V + ++ Sbjct: 836 NQKNKEKETFVTVSVKDKKL 855 >UniRef50_Q83FI1 Chaperone protein clpB n=13 Tax=Bacteria RepID=CLPB_TROWT Length = 705 Score = 754 bits (1947), Expect = 0.0, Method: Composition-based stats. Identities = 374/700 (53%), Positives = 514/700 (73%), Gaps = 7/700 (1%) Query: 154 AEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKT 213 + + L KY +LT+ A KLDPVIGRD EIRR Q+L RRTKNNPVLIG GVGKT Sbjct: 7 MSESQSELDKYGTNLTKTAATNKLDPVIGRDAEIRRVCQILSRRTKNNPVLIGSAGVGKT 66 Query: 214 AIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNV 273 AIVEGLAQRI+ G+VPE L+ + +++LD+ AL+AGA YRGEFE+R+K +L ++ K V Sbjct: 67 AIVEGLAQRIVAGDVPESLRNKEIVSLDLSALLAGASYRGEFEKRVKNLLEEIQKS--KV 124 Query: 274 ILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRF 333 I+FIDE+HT++ AG A+GA+ AGNMLKP LARGEL +GATTLDEYR+++EKD ALERRF Sbjct: 125 IIFIDEVHTLMSAGAAEGAIAAGNMLKPLLARGELRLIGATTLDEYREHLEKDPALERRF 184 Query: 334 QKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDL 393 Q+VFV EP++ED IAI+RGLKERYE HH V I+D A+V A LS RYI RQLPDKAIDL Sbjct: 185 QQVFVGEPNLEDCIAIMRGLKERYEAHHKVSISDTALVTAVELSSRYITGRQLPDKAIDL 244 Query: 394 IDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKER 453 +DEAASS+RM+IDS P ELD+L R + +L+LE+ AL E+D S++RL + +LS K+ Sbjct: 245 LDEAASSLRMEIDSSPVELDQLRREVDRLRLEELALKSENDPTSEQRLRSITNQLSGKQE 304 Query: 454 QYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQL 513 + L+ W +E+A L+ +K +++ AK + + A+R G L S L Y IP+L+K L Sbjct: 305 MLNTLQASWNSERARLNQIGALKEQIDIAKQSADIAQREGRLEDASRLLYATIPQLQKNL 364 Query: 514 EAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQ 573 + E + L+ ++V +IA V+ WTGIPV ++M+ + ++LL +E++L VI Q Sbjct: 365 AEKLE-EQDSAPLVSDQVMPEDIASVVEGWTGIPVKKLMQKDAKQLLHLEEDLSKSVIAQ 423 Query: 574 NEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRID 633 A+ +++A+RRSRAGL+DPNRP G+FLFLGPTGVGKT+L KALA+ ++D + +VRID Sbjct: 424 KVAIGVIADAVRRSRAGLSDPNRPSGTFLFLGPTGVGKTQLVKALASLLYDGE--IVRID 481 Query: 634 MSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQV 693 MSE+ EK S+SRL+GAPPGY+G+E G LTE+VRRRPYSV+L DE EKAHP+VF+ILLQV Sbjct: 482 MSEYSEKFSISRLIGAPPGYIGHESAGQLTESVRRRPYSVVLFDEAEKAHPEVFDILLQV 541 Query: 694 LDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEF 753 LD+GRLTD GRTVDFRNT++++TSN+GS + + E AH E V V FRPEF Sbjct: 542 LDEGRLTDSHGRTVDFRNTIIVLTSNIGSRYLSDISLEATTAH--EYVNDEVRRTFRPEF 599 Query: 754 INRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYG 813 +NR+DE+V+F PL + I I + ++ L KR+++R + +S++ + LS++GYD +YG Sbjct: 600 LNRLDEIVIFEPLSQSDICQIVDLNIESLNKRIKDRRIVVTVSEDLRRWLSKSGYDVIYG 659 Query: 814 ARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRI 853 ARPL+R IQ++IE+ LA+ I+ G + G+ +++ + Sbjct: 660 ARPLRRLIQREIEDRLAKLIIEGLIHDGQTASFDLSGGAV 699 >UniRef50_B7VTU3 Chaperone ClpB n=1 Tax=Vibrio splendidus LGP32 RepID=B7VTU3_VIBSL Length = 897 Score = 743 bits (1918), Expect = 0.0, Method: Composition-based stats. Identities = 317/884 (35%), Positives = 488/884 (55%), Gaps = 41/884 (4%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 + RL ++AL DA +LA+ ++ H + +LL + LL+ + LR Sbjct: 10 IQRLHPIVKVALEDAAALAVSEKANEVQIEHYLLSLLERPNSDFDILLSHFDCSETILRQ 69 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQK-RGDNFISSELFVLAALES--- 118 I LN G G S L+ L ++ + I S +L + + Sbjct: 70 SIRSTLNT--NTTGNGSKPVFSSLLIEWLQESWLVSSLDLSETQIRSGALLLTLVSNPLR 127 Query: 119 --RGTLADILKAAGATTANITQAIEQMRGGE------SVNDQGAEDQRQALKKYTIDLTE 170 + A IL+ G + + ++ + A + AL K+T D T Sbjct: 128 YGQHGYASILE--GVNPDTLKRNFSELTTNSLESLATTSEKTDAREDGSALSKFTTDFTG 185 Query: 171 RAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPE 230 +A +G++DPV RD+EIR+ I +L RR KNNP+ +GEPGVGKTA+VEGLA +I G+VP+ Sbjct: 186 KARKGEIDPVFCRDQEIRQIIDILARRRKNNPIAVGEPGVGKTAVVEGLALKITEGDVPD 245 Query: 231 GLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKAD 290 LKG + LDMG L AGA +GEFE+RL VL+++ +ILFIDE HT+VG G Sbjct: 246 CLKGVELYGLDMGLLQAGASVKGEFEKRLNAVLDEVKNSPTPIILFIDEAHTLVGGGNQA 305 Query: 291 GAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAIL 350 G DA N+LKPALARGE+ + ATT EY++Y EKD AL RRFQ V + EPS I+ Sbjct: 306 GGSDAANLLKPALARGEVKTIAATTWSEYKKYFEKDPALARRFQLVKLDEPSASQAALII 365 Query: 351 RGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPE 410 RGL+ YE H+V + D AI AAA L+ RYI RQLPDKAID++D A + + + +++ P Sbjct: 366 RGLRPAYEKSHNVYVRDDAITAAANLADRYITGRQLPDKAIDVLDTACARVNISLNATPA 425 Query: 411 ELDRLDRRIIQLKLEQQALMKES-----DEASKKRLDMLNEELSDKERQYSELEEEWKAE 465 ++ L + I E +AL ++ D+ S + L E++ + + L+ +WK E Sbjct: 426 PVETLHQEIAAANRELEALERDQLQQTGDKHSAALIPELKEKIEKATEEQATLQVQWKKE 485 Query: 466 KASLSGTQTIKAELEQAK---IAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGK 522 ++ + +++ L + A + + + + P + E T+ + Sbjct: 486 QSLIQEIIELRSHLYSLTTPSTEEDSAPKADNTIQDDDALTSDKPNCHEYSEEQTREAIQ 545 Query: 523 T-----------MRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVI 571 + L+ +V EI+ V++ WTGIP+ +M++ E + L ++Q L + Sbjct: 546 SCNERLDNVRGTNPLVHYEVGPDEISHVISDWTGIPMGKMLQDESQATLNLKQNLIQNIK 605 Query: 572 GQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVR 631 GQ A+DA++ I+ ++AGL +P+ P G FL +GP+GVGKTE +A+A+ MF + M Sbjct: 606 GQEFAIDALAEGIQTAKAGLGNPDAPTGVFLLVGPSGVGKTETARAIADQMFGGERFMTT 665 Query: 632 IDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILL 691 I+MSEF EKH+VSRL+G+PPGYVG+ EGG LTEAVR+RPYSV+LLDEVEKA P+V N+ Sbjct: 666 INMSEFQEKHTVSRLIGSPPGYVGFGEGGMLTEAVRQRPYSVVLLDEVEKADPEVLNLFY 725 Query: 692 QVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE---RFGELDYAHMKELVLGVVSHN 748 QV D G L DG+GRT+DF+NT++IMTSNL + I+ + ++D + E + ++ + Sbjct: 726 QVFDKGTLNDGEGRTIDFKNTLIIMTSNLATHEIESLVHQAKDIDANIVAEAIRPTLNQH 785 Query: 749 FRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERG-YEIHISDEALKLLSENG 807 F+P + R+ V+ F PL + + I +LK++ +RL+ + D ++ + N Sbjct: 786 FKPALLARM-SVLPFLPLSDAAMTDIIHHKLKKVSERLQSHHKLALCYGDNLVEFVLGNC 844 Query: 808 YDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKV-IRLEVNE 850 GAR + I +Q+ L+ Q+L + I + V+E Sbjct: 845 RLAETGARNIDAVINRQLLPQLSTQLLVNDKDDSHTQIEVSVDE 888 >UniRef50_B7FUC8 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FUC8_PHATR Length = 768 Score = 742 bits (1916), Expect = 0.0, Method: Composition-based stats. Identities = 379/706 (53%), Positives = 514/706 (72%), Gaps = 8/706 (1%) Query: 149 VNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEP 208 + + G Q L+++T+DLT +A KLDP+IGR EEIRR +Q+L RRTKNNPVLIGE Sbjct: 1 MTNAGPPKPGQYLEQFTVDLTNQAADNKLDPIIGRHEEIRRCLQILARRTKNNPVLIGEA 60 Query: 209 GVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAK 268 GVGKTAI EGLAQRI +GEVPE +K +RVL+LD+ AL AGA RG+FEERLKGV+ D+ + Sbjct: 61 GVGKTAIAEGLAQRIHSGEVPESMKDKRVLSLDIAALTAGAMMRGQFEERLKGVVKDVEQ 120 Query: 269 QEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAA 328 EG VILFIDE+HT+VGAGKA+G MD NMLKPALARG+L VGATTL+E+R +EKDAA Sbjct: 121 AEGKVILFIDEIHTIVGAGKAEGGMDMSNMLKPALARGDLQLVGATTLNEFR-ILEKDAA 179 Query: 329 LERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPD 388 L RRFQ V+VAEPSVED+++ILRGLK YELHH ++I D A+VAAATLS RYIADR+ PD Sbjct: 180 LARRFQSVYVAEPSVEDSLSILRGLKTAYELHHGIRIKDEALVAAATLSDRYIADRKQPD 239 Query: 389 KAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASK--KRLDMLNE 446 K+IDL+DEA S +R++ +SKPE + +++R ++ ++E+ AL E D K R + Sbjct: 240 KSIDLVDEACSRLRLEQESKPEIIWKVERDLLTRQIERSALENEDDSDDKVATRRKQVER 299 Query: 447 ELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKI 506 E+S+ + + L E W AEK L+ QT+K +LE+A+ +E ARR GD A+ EL + I Sbjct: 300 EVSELKTEVGRLTELWMAEKNELNRVQTVKGDLEKARADMEAARRQGDYAKAGELMHATI 359 Query: 507 PELEKQLEAATQL--EGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQ 564 P LE + EA E K ++L + VT IA ++AR TGIPVSR+ +E +KLL +E Sbjct: 360 PNLEHEFEALESTVDEHKKTKMLADSVTAEAIATIIARHTGIPVSRIAGNESQKLLHIED 419 Query: 565 ELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFD 624 +L RV+GQ+ A++AV + +R +R L +R +G+FLFLGPTGVGKTE KALA+F+FD Sbjct: 420 KLRERVVGQDHALEAVGDCVRLARTRLQAQDRTLGNFLFLGPTGVGKTETAKALAHFLFD 479 Query: 625 SDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHP 684 +AM RIDMSE+ EKH+VSRL+GAPPGYVGYEEGG LTE+VRRRPY V+LLDE EK H Sbjct: 480 DQDAMTRIDMSEYGEKHTVSRLIGAPPGYVGYEEGGVLTESVRRRPYQVLLLDEFEKGHR 539 Query: 685 DVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGEL--DYAHMKELVL 742 +V+N+LLQ+ D+G LTD GR VDFRN +VIMTSNLG+ +I E +L H+ + ++ Sbjct: 540 EVWNLLLQLFDEGHLTDSHGRKVDFRNVIVIMTSNLGAQIIAELPAQLKGSEPHVHDTIM 599 Query: 743 GVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEE-RGYEIHISDEALK 801 VV + PE +NRID+ +VF+ L +++ +IA++ +K + KRLE+ + + +S A Sbjct: 600 EVVRQSLSPELLNRIDDTIVFNRLQRENMDTIAEMGIKEIEKRLEDGQNMSLDVSSTATA 659 Query: 802 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLE 847 +++E GYD YGARPLKR + + + NPL++ +L G ++ G +++ Sbjct: 660 VIAEMGYDVRYGARPLKRTLAKTLLNPLSRLVLEGAVMEGDTVKVR 705 >UniRef50_A5IMI3 ATPase AAA-2 domain protein n=8 Tax=Thermotogaceae RepID=A5IMI3_THEP1 Length = 791 Score = 741 bits (1914), Expect = 0.0, Method: Composition-based stats. Identities = 364/854 (42%), Positives = 523/854 (61%), Gaps = 76/854 (8%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 L+ T K Q + Q + + + H++ A+L + LL ++ +L Sbjct: 2 FNLEEYTEKAQKVMMSIQDIMTRYRQNQLSSEHILLAILEEGNNVGVELLKELNVDINRL 61 Query: 61 RTDINQALNRLPQVEGTGGDVQ---PSQDLVRVLNLCDKLAQKRGDNFISSELFVLAA-L 116 + ++ + + G V + D V+ + A++ GD+ I +E +L L Sbjct: 62 KDEVEVFIGKYGVRVPEGASVSQIFITPDARHVIEKAREEARRMGDSKIGTEHLILGMVL 121 Query: 117 ESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGK 176 T IL G T + +AI ++ S + +AL ++T+DLT+ A + K Sbjct: 122 SPDSTAFRILSRYGVTPERVYEAIRKI---RSTGKTDEAENVEALARFTMDLTQLAREKK 178 Query: 177 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRR 236 L PV+ R++EIRR IQ+L RRTKNNPVLIG+PGVGKTA+VEGLAQRI+ G+VP L+ R Sbjct: 179 LMPVVDREKEIRRVIQILSRRTKNNPVLIGDPGVGKTAVVEGLAQRIVEGKVPLFLRNVR 238 Query: 237 VLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAG 296 VL LDMG LVAG ++RG+FEERLK +L++L +++G VILFIDE+HT+VGAG A+GA+DA Sbjct: 239 VLKLDMGRLVAGTRFRGDFEERLKRLLDELKRKKGEVILFIDEVHTVVGAGAAEGALDAA 298 Query: 297 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 356 N++KP L GE+ +GATT++EYR+YIEKD ALERRFQ V V EP+VE TI IL+GL++ Sbjct: 299 NIMKPELTTGEIQIIGATTVEEYRKYIEKDRALERRFQPVIVEEPTVEQTIEILKGLRKV 358 Query: 357 YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 416 +E HHHV+ITD A+ AA LS RYI +R LPDKA+DLIDEAA+ +R++ EEL +L+ Sbjct: 359 FEEHHHVKITDDALETAAKLSARYITNRFLPDKAVDLIDEAAAYVRLESSYPSEELLKLE 418 Query: 417 RRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476 I L+ + +N+ + E ++ Q +K Sbjct: 419 EEIKNLE------------------EKINDAVVKGE---------YEEAAKLKVELQRLK 451 Query: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 536 E E+ + E+ V D E +I E + + +E + +LL Sbjct: 452 NEYEEKRKKQEKVEPVVD-----ENVVARIVEQWTGIPVSRIMESEREKLL--------- 497 Query: 537 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNR 596 ++E+ +H R++ Q EAV V+ IRR+R G+ +P R Sbjct: 498 ------------------------KLEEFIHQRLVNQEEAVKIVARTIRRARVGIKNPRR 533 Query: 597 PIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGY 656 PIG FLFLGPTGVGKTEL + LA+ +F S++AM+R+DMSE+MEKHSV+RL+GAPPGYVGY Sbjct: 534 PIGVFLFLGPTGVGKTELARTLADVLFGSEDAMIRLDMSEYMEKHSVARLIGAPPGYVGY 593 Query: 657 EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 716 EEGG LTEAVR+RPYSVILLDE+EKAHPDVFNILLQV +DGRLTDG+G TVDFRNT++IM Sbjct: 594 EEGGQLTEAVRKRPYSVILLDEIEKAHPDVFNILLQVFEDGRLTDGKGNTVDFRNTIIIM 653 Query: 717 TSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQ 776 TSN+GS+ I E + ++ + + + F+PEF+NRID +V F PL + + I + Sbjct: 654 TSNIGSEKILE----MSENGVRIEIERELRNTFKPEFLNRIDAIVYFKPLTMEEVKKIVE 709 Query: 777 IQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSG 836 I +++L + L+E+ I +++ A L+E GY P GARPL+R I+ ++E+ +A +IL G Sbjct: 710 IMVRQLQEILKEKNISIELTERAKDYLAEAGYVPSLGARPLRRIIELELESMIADKILEG 769 Query: 837 ELVPGKVIRLEVNE 850 E+ G + ++ +E Sbjct: 770 EIKEGDRVLVDADE 783 >UniRef50_C7PZ63 ATPase AAA-2 domain protein n=7 Tax=Actinomycetales RepID=C7PZ63_CATAD Length = 841 Score = 741 bits (1913), Expect = 0.0, Method: Composition-based stats. Identities = 367/854 (42%), Positives = 515/854 (60%), Gaps = 77/854 (9%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 LT+ + ++ A A + ++ HL+ A E +L +A ++ +L I Sbjct: 43 LTDSARELISTASQRAGQDGSSDLDTEHLLWAATQVE--PTRGILAAANVDPDRLAQTIK 100 Query: 66 QALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLA-D 124 ++L + + RVL +L++ G +I + + A E + + A Sbjct: 101 KSL--PASGSTPSAEPGLTPAAKRVLMRAHELSRSSGSTYIGPQHILAALTEDQDSGAGH 158 Query: 125 ILKAAGATTANITQAIEQMRGGESV-NDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGR 183 +L ++ + I + E + L +Y D+TE A+ GKLDPV+GR Sbjct: 159 VLNTTQVDAKDLGKRITKASRAEGMPTGPEQPSDTPTLDEYGRDMTEDAKAGKLDPVVGR 218 Query: 184 DEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMG 243 +EI +T++VL RRTKNNPVLIG+PGVGKTAIVEGLAQRI++G+VP L+G+RV+ LD+ Sbjct: 219 ADEIEQTVEVLSRRTKNNPVLIGDPGVGKTAIVEGLAQRIVSGDVPTTLEGKRVVMLDLA 278 Query: 244 ALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGK-ADGAMDAGNMLKPA 302 ALVAG+KYRGEFEERLK V++++ K + ILFIDELHT+VGAG +G+MDAGN++KPA Sbjct: 279 ALVAGSKYRGEFEERLKNVIDEVGKAADSTILFIDELHTVVGAGSGGEGSMDAGNIMKPA 338 Query: 303 LARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHH 362 L+RGEL+ +GATT+DEYR+ IEKDAALERRFQ V +AEP+VE+TI IL GL++RYE HH Sbjct: 339 LSRGELNVIGATTIDEYRKNIEKDAALERRFQPVLIAEPTVEETIEILEGLRDRYEAHHG 398 Query: 363 VQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQL 422 V+ TD A+ AAA +S RYI+DR LPDKAIDLID+A + IR++ K E + ++ +L Sbjct: 399 VKFTDEALAAAALMSDRYISDRFLPDKAIDLIDQAGARIRLRNLGKSTEAIEREDKLAKL 458 Query: 423 KLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQA 482 E R + ++ E D+ + EE E A++ + ++ + Sbjct: 459 TRE--------------RDEAVSAENYDRAKDLKARIEELNDEVATIEERREGTLKVTEK 504 Query: 483 KIAIEQARRVG-DLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLA 541 IA +RR G +A+++E + ++ +LE L + + + + V Sbjct: 505 DIAEVVSRRTGIPVAQLNEDERTRLLKLEDALHDRVVGQEEAVTAIAEAV---------- 554 Query: 542 RWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSF 601 RRSRAG+ DPNRP GSF Sbjct: 555 -------------------------------------------RRSRAGMGDPNRPTGSF 571 Query: 602 LFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGY 661 LFLGPTGVGKTEL KALA +F ++ ++R DMSEF EKH+VSRL+G+PPGYVGYEE G Sbjct: 572 LFLGPTGVGKTELAKALAELLFGDEDRLIRFDMSEFQEKHTVSRLLGSPPGYVGYEEAGQ 631 Query: 662 LTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLG 721 LTE VRR+PYSVIL DEVEKAHPD+FN LLQVLDDGRLTD QGRTVDFR+TVVIMTSN+G Sbjct: 632 LTERVRRKPYSVILFDEVEKAHPDIFNTLLQVLDDGRLTDAQGRTVDFRHTVVIMTSNIG 691 Query: 722 SDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKR 781 S LI G+ D +++ ++ V F PEFINR+DEVV+FH LG+ + +I + L Sbjct: 692 SQLILAHMGDTD--EIRDQLMDQVRSFFPPEFINRLDEVVIFHSLGKPEMGNIVDLMLDS 749 Query: 782 LYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPG 841 +RL+ + + ++++A L E GY P +GARPL+R IQ +++N +A +LSG+ PG Sbjct: 750 SRRRLKAQELGLEVTEKAKNWLVERGYKPEFGARPLRRTIQSELDNKVATLLLSGDTHPG 809 Query: 842 KVIRLEVNEDRIVA 855 I + +D +V Sbjct: 810 DTIVADEADDHLVC 823 >UniRef50_C2D9C6 ATPase with chaperone activity, ATP-binding subunit n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D9C6_9ACTN Length = 875 Score = 738 bits (1905), Expect = 0.0, Method: Composition-based stats. Identities = 357/890 (40%), Positives = 504/890 (56%), Gaps = 99/890 (11%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 ++ T + + L AQ A ++ H++ A L E SV+ +L+S I Q Sbjct: 1 MFEQFTAQTRNILLLAQEEARSVGKLYVGTEHILLAYLKDEENSVTQVLSSFDITYAQAY 60 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGT 121 + L + G V S R L LA I+++ +A L + Sbjct: 61 EIVES-LASTGAADAASGHVPFSALTKRALAQAFTLASAHATGLITTKDLFIAMLALPES 119 Query: 122 LADI-LKAAGATTANITQAIEQMRGGESVNDQGAEDQRQ--------------------- 159 A + L G + ++++ AI+ + E + + Q Sbjct: 120 HACLVLTRIGVSFSSLSTAIDALDDSEEYSAPEDAESTQDEQDDDLTEVAYGIPSASQAR 179 Query: 160 -----ALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214 LK+Y +L A+Q KLDPVIGRD+EI R Q+L RR KNNP+++G+PGVGKTA Sbjct: 180 SKMGKLLKRYGKNLVAVAQQEKLDPVIGRDKEITRIAQILARRQKNNPLILGDPGVGKTA 239 Query: 215 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 274 +VEGLAQ I P L +++ LD+ +++AGAKYRGEFE+RLK V+N++ K N+I Sbjct: 240 VVEGLAQLIATHNAPVTLADKQIWTLDISSMLAGAKYRGEFEDRLKRVINEVRKA-TNII 298 Query: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334 LFIDE+HT++GAG A+G++DA ++LKP L+R E+ +GATT +EYR++IEKD ALERRFQ Sbjct: 299 LFIDEIHTIIGAGSAEGSIDAASILKPPLSRSEIQVIGATTAEEYRKHIEKDPALERRFQ 358 Query: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394 V V EP+V T+ IL+GL RYE HHV T A+V A LSHRYI DR LPDKAI Sbjct: 359 PVEVCEPTVSQTLQILKGLSARYEAFHHVHYTQNALVEATRLSHRYIQDRFLPDKAI--- 415 Query: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQ 454 D+++E + K Sbjct: 416 -----------------------------------------------DVIDEAGARKSVV 428 Query: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLE 514 E + +L+ + K L + + A D LE+++ Sbjct: 429 KRHEPHEIVTMRTALAKLKEKKERLLAHENYEDAASVRDDEK-----------SLEQKIV 477 Query: 515 AATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574 A + K+ + V +IA V++ +G+PV+ + E E EKLLR EQELH R+IGQ Sbjct: 478 HAVKDWEKSRASEQQNVDVNDIARVISDISGVPVTSLTEKESEKLLRCEQELHKRLIGQK 537 Query: 575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 634 EAV V++AIRRSR+ L DP RP GSF+FLGP+GVGKTEL K+LA F+F + EA++ DM Sbjct: 538 EAVAKVAHAIRRSRSPLKDPARPGGSFIFLGPSGVGKTELAKSLAEFLFGTQEALISFDM 597 Query: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694 SEFMEKH VS+LVGAPPGYVGY++GG LT+AVRRRPYSV+L DE+EKAHPDVFNILLQ+L Sbjct: 598 SEFMEKHEVSKLVGAPPGYVGYDQGGELTKAVRRRPYSVVLFDEIEKAHPDVFNILLQIL 657 Query: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLI---------QERFGELDYAHMKELVLGVV 745 ++GRLTDGQGR VDF NTV+IMTSN+G+ I + L Y +K V + Sbjct: 658 EEGRLTDGQGRVVDFSNTVIIMTSNIGAREIAHTSPMGFSSQGDDGLSYKEIKSRVKSEL 717 Query: 746 SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSE 805 +FRPEF+NR+DE+VVF L ++ + I ++ + +L RL + + +SD A L+++ Sbjct: 718 KRSFRPEFLNRVDEIVVFTTLSKEELRKIVELMVSQLAYRLAQEHIMLTLSDAACDLIAQ 777 Query: 806 NGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855 G DP+YGARPL+R +Q+ +E+ LA+ +L + G + ++ E +V Sbjct: 778 KGTDPIYGARPLRRTLQRLVEDRLAEDLLEHKWSAGDEVYVDAQEHELVF 827 >UniRef50_Q7U3T3 Chaperone protein clpB 2 n=10 Tax=cellular organisms RepID=CLPB2_SYNPX Length = 900 Score = 736 bits (1900), Expect = 0.0, Method: Composition-based stats. Identities = 400/886 (45%), Positives = 555/886 (62%), Gaps = 46/886 (5%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 DR ++ L Q +A + ++ HL+ L + S + + + L Sbjct: 14 EPDRFSDPAWELLLAGQDMARRWRHDQLDVEHLIQVLFSD--SSFRRWVEPLPLRSDDLL 71 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGT 121 + L P G + +DL ++L D++ + GD I ++A Sbjct: 72 DRLEDVLADQP--PARGDQLFIGEDLEQLLETADQVRGRWGDRSIDVPQLIVAVGADPRI 129 Query: 122 LADILKAAGATTANITQAIEQ------------------------------MRGGESVND 151 A++ A G + + Q + E Sbjct: 130 GAELFAAQGLAVDRLESLLRQPSVSPAPAPPPVPTAASAPAPTPRSAPAPRVMAPEPEPM 189 Query: 152 QGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVG 211 E + AL+ Y DLTE AE G LDPVIGRD EIR I+VL RR+KNNPVLIGEPGVG Sbjct: 190 VELEREPSALEAYGRDLTEEAEAGSLDPVIGRDSEIRNLIKVLSRRSKNNPVLIGEPGVG 249 Query: 212 KTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEG 271 KTAI E LAQRI+ GEVP+ L+G R++ALD+GAL+AGAK+RG+FEERL+ VL ++++ + Sbjct: 250 KTAIAELLAQRIVAGEVPDSLQGLRLIALDLGALIAGAKFRGQFEERLRSVLEEVSRSDS 309 Query: 272 NVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALER 331 V+LFIDELHT+VG+ ++ + DAG++LKPALARG+L C+GATT +EYR+ +EKD AL R Sbjct: 310 GVVLFIDELHTVVGSDRS--STDAGSLLKPALARGDLRCIGATTPEEYRRTVEKDPALNR 367 Query: 332 RFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAI 391 RFQ+V + EP +E ++ ILRGL+ERYELHH V ITD AI A L+ RYI+DR LPDKAI Sbjct: 368 RFQQVLIREPDLELSLEILRGLRERYELHHGVTITDEAIQTANRLADRYISDRCLPDKAI 427 Query: 392 DLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDK 451 DLIDEAA+ +++++ SKP+ ++ + + ++ + + ++EA ++ L + + Sbjct: 428 DLIDEAAAQLKIEVTSKPQVVEEAEADLRRV----ELALLAAEEAPEEERIQLQRQRLEV 483 Query: 452 ERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEK 511 + +L W+ E+ L + + E + AI +A R G L + LQY ++ +++ Sbjct: 484 SSRLDDLRRRWQEERTQLEELGQLLQQDEDLRHAIAEAEREGALEEAARLQYDQLHTVQQ 543 Query: 512 QLEAATQLEGKTMR----LLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELH 567 + EA + + LLR +V +IA+++ARWTGIPV R++ ER KLL +E L Sbjct: 544 RREALEASQAEAQSAGTALLREQVEAGDIADLVARWTGIPVQRLLAGERRKLLALESHLS 603 Query: 568 HRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDE 627 RVIGQ EAV AV+ AIRR+RAG+ DP RP+GSFLFLGPTGVGKTEL KALA +FD +E Sbjct: 604 ERVIGQVEAVAAVAAAIRRARAGMKDPRRPVGSFLFLGPTGVGKTELAKALATSLFDEEE 663 Query: 628 AMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVF 687 A+VR+DMSEFME+++ +RL+GAPPGYVGYEEGG LTEAVRRRPY+V+LLDEVEKAHPDVF Sbjct: 664 ALVRLDMSEFMERNASARLIGAPPGYVGYEEGGQLTEAVRRRPYAVLLLDEVEKAHPDVF 723 Query: 688 NILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE--RFGELDYAHMKELVLGVV 745 N+LLQVLDDGRLTD QG TVDFR+TVV+MTSNL S +I E R G D A +++ V + Sbjct: 724 NLLLQVLDDGRLTDSQGLTVDFRHTVVVMTSNLASPVILEHARSGSSDDAQLQQQVDAAL 783 Query: 746 SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSE 805 S FRPEF+NRIDEV+ F PL + + I ++QL L + E+G + + D L+ Sbjct: 784 SSQFRPEFLNRIDEVIRFRPLKVKDLVRIVRLQLADLSTLMAEQGLSLEVDDAVADSLAR 843 Query: 806 NGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNED 851 G++P YGARPL+R +++Q+ENPLA Q+L IR+ D Sbjct: 844 QGHEPEYGARPLRRVLRRQLENPLATQLLEERFRSAHGIRVRCGTD 889 >UniRef50_B5Y8V8 Negative regulator of genetic competence ClpC/mecB n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y8V8_COPPD Length = 805 Score = 736 bits (1899), Expect = 0.0, Method: Composition-based stats. Identities = 369/858 (43%), Positives = 527/858 (61%), Gaps = 74/858 (8%) Query: 5 RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDI 64 R + + + AL DAQ A ++ F+ HL+ A+LN++ ++ S G +A +R+ I Sbjct: 4 RFSEEARKALKDAQEEARRLNSSFVGREHLVLAMLNEDT-RAYSIIDSLGADADNIRSSI 62 Query: 65 NQALNRLPQVEGTGGD-VQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLA 123 +P + + S + R+L++ + A+K +++ +E +LA L+ ++ Sbjct: 63 ED----IPMPMASSLQYPELSSEARRLLDIASEEARKLAHSYVGTEHLLLAILKEPSRVS 118 Query: 124 DILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGR 183 IL G ++ + + +M GE ++ + + L K++ DL AE+GKLDPVIGR Sbjct: 119 SILNENGVFYDDVRKKVIEM--GEQEPEEKGKTKTPVLDKFSKDLVSLAEKGKLDPVIGR 176 Query: 184 DEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMG 243 + E+ R I++L RR KNNP+L+GEPGVGKTAIVEGLA+RI +G+VP LK +RV+ LD+ Sbjct: 177 ETELNRIIEILSRRIKNNPILLGEPGVGKTAIVEGLAERIASGKVPYSLKKKRVVQLDIS 236 Query: 244 ALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPAL 303 ++VAG KYRGEFEER+K +L+++ + G VILFIDE+HT++GAG A+GA+DA ++LKP+L Sbjct: 237 SIVAGTKYRGEFEERMKKILDEVKRTNGQVILFIDEIHTVIGAGAAEGAIDAASILKPSL 296 Query: 304 ARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHV 363 ARGE+ +GATT D+YR+YIE+D A ERRFQ V V EPS+E+T IL GL+ YE H+V Sbjct: 297 ARGEIKVIGATTYDDYRKYIERDPAFERRFQPVQVEEPSLEETKQILIGLRPIYEKFHNV 356 Query: 364 QITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLK 423 +I D AI AAA L+ +Y+ R LPDKAID +DE + +R+ + P L L I ++ Sbjct: 357 KIADDAIEAAAILTKKYVKQRFLPDKAIDALDETCAKVRLANEVLPSNLRALLDEIENVR 416 Query: 424 LEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAK 483 L++Q + D + L ++ + +YS +EE W L + Sbjct: 417 LQKQLAI---DSQQFEEAAALRDKEKALKEEYSRMEEIW----------------LYERS 457 Query: 484 IAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARW 543 + Q D + + IP + +L+ +L Sbjct: 458 MDENQPTVSFDDVAYTISSWTGIPVAKLRLDDKKKL------------------------ 493 Query: 544 TGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLF 603 L +E LH R++GQNEAV AV+ AIRRSR GL D RPIG FLF Sbjct: 494 ----------------LEIEDYLHRRIVGQNEAVTAVAKAIRRSRTGLQDDRRPIGVFLF 537 Query: 604 LGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLT 663 LGPTGVGKTEL +ALA FMF +EA++RIDMSE+MEK +VSRLVGAPPGYVGYEEGG LT Sbjct: 538 LGPTGVGKTELARALAEFMFGEEEALIRIDMSEYMEKFNVSRLVGAPPGYVGYEEGGQLT 597 Query: 664 EAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSD 723 EAVRR+P+S++LLDE+EKAHPDVF+ILLQ+ +DGRLTDGQGR VDFRNT++IMTSNLGS Sbjct: 598 EAVRRKPHSIVLLDEIEKAHPDVFDILLQIFEDGRLTDGQGRVVDFRNTIIIMTSNLGSR 657 Query: 724 LIQER------FGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQI 777 I ++ + +M+ LV+ V F+PEF+NRIDE+VVFH L + I I Sbjct: 658 DISAGTTIGFLKDQVKFENMENLVMDAVKKFFKPEFLNRIDEIVVFHHLTNDDLRQIVGI 717 Query: 778 QLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGE 837 + L K+L + + ISD L + GY+P +GARPL+RAIQ+ +++PLA+ +L E Sbjct: 718 MMDELNKQLRSQNLTVKISDRMLDQIITEGYEPRFGARPLRRAIQRLVKDPLAEYMLKHE 777 Query: 838 LVPGKVIRLEVNEDRIVA 855 + G + ++ + I Sbjct: 778 NISG-TLFMDFVDGEITI 794 >UniRef50_A9FG71 ATPase with chaperone activity, two ATP-binding domains n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FG71_SORC5 Length = 871 Score = 735 bits (1898), Expect = 0.0, Method: Composition-based stats. Identities = 360/867 (41%), Positives = 539/867 (62%), Gaps = 14/867 (1%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 + LDR T + +A AQ +A + + PLHL+ LL ++ G VS + AG + ++ Sbjct: 8 IHLDRYTGDAKQVVAGAQQIADERQHAEVTPLHLLMRLLERDRG-VSEVFRRAGADPNEV 66 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES-R 119 AL +L + G+ G S L+ +L ++ A + + E + A + R Sbjct: 67 LQLAENALKKLSRA-GSSGVAYVSPRLLDLLGRAEREATRDKSQNVGIEHLLHALAQEIR 125 Query: 120 GTLADILKAAGATTANITQAI--EQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKL 177 G +IL + G + + E + YT DL A +G+ Sbjct: 126 GPAGEILSSFGIGPGAFRPHLGALEAASREPSPAPANAAEPGQPAPYTRDLVADAREGRF 185 Query: 178 DPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRV 237 DPVIGRD E RR +Q+L+RR KN+P+++GEPGVGKTA++ GLA RI +G+VP L G + Sbjct: 186 DPVIGRDVEARRLLQILERRFKNHPLIVGEPGVGKTALIRGLADRIAHGDVPTNLAGAHL 245 Query: 238 LALDMGALVAGAKYRGEFEERLKGVLNDLA-KQEGNVILFIDELHTMVGAGKADGAMDAG 296 LD GALVAGAK RGE E+RLK +++ L +Q+ IL +++L + G + G Sbjct: 246 YELDTGALVAGAKLRGEIEQRLKVLVDRLRGEQDAESILVVEDLDALFG--QGVQGAGVG 303 Query: 297 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 356 +LKP L+RGE+ + TT + R+ E+D + RRF + + PS++ ILRG+ + Sbjct: 304 ELLKPLLSRGEIRIIATTTPEGVRKINERDPGIIRRFSTITLEAPSIDQATEILRGIATK 363 Query: 357 YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 416 YE HH V++ + AI +A L+ RYI+DR LPD A+DL+DE ++ R+++D P ELD L Sbjct: 364 YEAHHRVRVGESAITSAVALAKRYISDRALPDTAVDLLDETSARKRVEVDGVPAELDTLT 423 Query: 417 RRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476 RR+ L+ + AL + D+ S + L EL++ E + S + + + ++ Q I+ Sbjct: 424 RRVDALRAQIAALADDDDKLSVQTRTRLEAELAEIEPKASSMRSRNASRRGVIAACQAIR 483 Query: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQL-EGKTMRLLRNKVTDAE 535 EL A A++ A+R A++ EL++ +PE+ ++L+AA + + + + N V +++ Sbjct: 484 RELVAATEALKAAQRDKAFAKIGELEHVTLPEIRRRLQAAEEAAQREGVAPTSNVVAESD 543 Query: 536 IAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPN 595 +A L WTGIPV++M+E E EKLL+ME L RV+GQ+EAV A++ A+RR R GL DP Sbjct: 544 VAATLNDWTGIPVAKMLEGEAEKLLKMEARLAQRVVGQDEAVRAIAKAVRRGRVGLRDPG 603 Query: 596 RPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVG 655 +PIGSFLFLGP+GVGKTEL KALA F+FD ++A+ R+DMSEFME+H RL+GAPPGY Sbjct: 604 KPIGSFLFLGPSGVGKTELAKALAEFLFDDEQALTRMDMSEFMERHMAQRLIGAPPGYAD 663 Query: 656 YEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVI 715 E+GG+LTEA RRRPYSV+L DEVEKAH DVFN+LLQ+LDDGRLTDG+GR DF NTVVI Sbjct: 664 SEQGGFLTEAARRRPYSVLLFDEVEKAHADVFNLLLQILDDGRLTDGRGRLADFSNTVVI 723 Query: 716 MTSNLGSDLIQERFGEL-----DYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQH 770 MTSN+GS + E +L +++++L + FRPEF+NR+D++VVF L ++ Sbjct: 724 MTSNIGSKRVLETDAKLWTTEDGREAIRDVLLEELRGFFRPEFLNRVDDIVVFKALSKED 783 Query: 771 IASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLA 830 + I IQL+RL + L ++ + ++D A L E GY+P GARPLKRAI ++++NPLA Sbjct: 784 LRGIVDIQLRRLEQLLTDKDIRLALTDAAKARLVELGYEPSLGARPLKRAILRELQNPLA 843 Query: 831 QQILSGELVPGKVIRLEVNEDRIVAVQ 857 + IL+G PG+ ++++V +++ V + Sbjct: 844 ETILAGGYQPGQTMQVDVVDEKFVFTK 870 >UniRef50_C1SG60 ATPase with chaperone activity, ATP-binding subunit n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SG60_9BACT Length = 802 Score = 734 bits (1894), Expect = 0.0, Method: Composition-based stats. Identities = 326/866 (37%), Positives = 506/866 (58%), Gaps = 77/866 (8%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 + T++ + + A+ + I+ H++ LL + G + + + GI+ L Sbjct: 1 MFELFTDRARRVILFAREASERLMQTSIDTEHILLGLLRERSGLAAEIFSRRGIDVSMLM 60 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL-ESRG 120 D+ ++ G + SQ+ VL+ + A+ + ++++E +L L E +G Sbjct: 61 NDVKG-VSEKGHNLMIKGSLPFSQNGKNVLDFSVEEAKNLKNKYVNTEHILLGLLKEKKG 119 Query: 121 TLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPV 180 + +L G + + I+ + + N A L ++ DLT+ A GKLDPV Sbjct: 120 KASMLLSKLGFDLVTLREEIQTVSKSYAKNTDQAVT--PTLDEFGRDLTKLAMDGKLDPV 177 Query: 181 IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL 240 IGR EI R IQ+L RR KNN V+IGEPGVGKTAIVEGLA ++ + +VP+ L+ +R+ +L Sbjct: 178 IGRSTEITRLIQILGRRIKNNAVIIGEPGVGKTAIVEGLALKMASEDVPDFLRNKRLFSL 237 Query: 241 DMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLK 300 ++G +VAG KYRG+FEER+K ++ ++ + +GNVI+FIDE+HT+VGAG A+G++DA NMLK Sbjct: 238 ELGNVVAGTKYRGQFEERMKNLIKEI-ETDGNVIIFIDEIHTIVGAGAAEGSIDASNMLK 296 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELH 360 PALARG C+GATTL E+R+ EKD AL RRFQ + V +P ++T+ IL G+K YE Sbjct: 297 PALARGVFQCIGATTLSEFRKNFEKDGALNRRFQTISVDQPDADETVQILDGIKRFYEDF 356 Query: 361 HHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRII 420 H V I + L+ RYI ++ PDK+ID++DEA S +++ + P+++ R+ ++ Sbjct: 357 HKVFIPHDVLEEITRLTDRYITEKFQPDKSIDVLDEACSRLKLATRTMPDDMVRIKNKLE 416 Query: 421 QLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELE 480 QLK + ++ +D D ++YS+ E W + + + +L+ Sbjct: 417 QLKGLRDEKLRAND--------------YDNIQKYSKDVERWATKLSVAQKEWEEELDLD 462 Query: 481 QAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVL 540 + IE I+EV+ Sbjct: 463 WPTLTIEN-----------------------------------------------ISEVV 475 Query: 541 ARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGS 600 A TG+PV ++ + ++ +++++ +IGQ+EAVDA+S +++RS AGL++P RP+GS Sbjct: 476 AHMTGVPVQKLQTDDMARIANIDKDIKEFIIGQDEAVDALSRSVKRSFAGLSNPARPLGS 535 Query: 601 FLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG 660 F+F+GPTGVGKTE+ K LA +F S+ +++RIDM+E+ME+ + SRL+GAPPGYVGYEEGG Sbjct: 536 FIFMGPTGVGKTEVAKKLAETVFGSESSLIRIDMTEYMERFNSSRLIGAPPGYVGYEEGG 595 Query: 661 YLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL 720 LTE VRR+PYSV+L DE+EKAHP+V NILLQ+LDDG + D G V+F+NT++IMTSNL Sbjct: 596 KLTEQVRRKPYSVVLFDEIEKAHPEVLNILLQILDDGHINDSLGHKVNFKNTIIIMTSNL 655 Query: 721 GS-----------DLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQ 769 G+ D +E E+DY + F PEFINR+D +VVF PLG+ Sbjct: 656 GTKLSMNRKTLGFDTKEESNNEIDYDVFSTNAHRELKDRFPPEFINRVDSLVVFKPLGKA 715 Query: 770 HIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPL 829 + I +QL + KRLE G ++ I + + L Y+ YGARP+KR +Q +IE+PL Sbjct: 716 ELIEIIDLQLIEINKRLEIAGKQLTIDQDVKEHLLSGEYEYSYGARPIKRLLQSKIEDPL 775 Query: 830 AQQILSGELVPGKVIRLEVNEDRIVA 855 ++ +L G+ K +++++ D IV Sbjct: 776 SEILLEGKFAKRKNLKVKMINDEIVF 801 >UniRef50_C6HIF6 Heat shock protein n=1 Tax=Ajellomyces capsulatus H143 RepID=C6HIF6_AJECH Length = 762 Score = 731 bits (1886), Expect = 0.0, Method: Composition-based stats. Identities = 364/719 (50%), Positives = 495/719 (68%), Gaps = 42/719 (5%) Query: 142 QMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNN 201 GG + G E ++ AL+ Y +DLT RA+ GKLDPVIGRD EI+RTIQ+L RRTKNN Sbjct: 67 HPPGGTHRMNLGGEPEKPALEAYGVDLTARAKDGKLDPVIGRDGEIQRTIQILSRRTKNN 126 Query: 202 PVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKG 261 PVLIG G GKTAI+EGLAQRI+ G+VPE +K +RV+ALD+G L+AGAK+RG+FEERLK Sbjct: 127 PVLIGSAGTGKTAILEGLAQRIVRGDVPESVKDKRVIALDLGQLIAGAKFRGDFEERLKK 186 Query: 262 VLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQ 321 VL ++ +G VILF+DELHT++G GKA+G++DA N+LKPAL+RGEL C GATTL+EYRQ Sbjct: 187 VLKEVEDAQGGVILFVDELHTLLGLGKAEGSIDASNLLKPALSRGELQCCGATTLNEYRQ 246 Query: 322 YIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYI 381 IEKD AL RRFQ + V EPSV DTI+ILRG+KE+YE+HH V+ITD A+VAAAT S+RYI Sbjct: 247 -IEKDVALARRFQPILVEEPSVPDTISILRGIKEKYEVHHGVRITDGALVAAATYSNRYI 305 Query: 382 ADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRL 441 DR LPDKAIDL+DEAAS++R+Q +SKP+ + LDR+I+ +++E ++L KE+D SK+R Sbjct: 306 TDRYLPDKAIDLVDEAASALRLQQESKPDAIQELDRQIMTIQIELESLRKETDITSKERR 365 Query: 442 DMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSEL 501 + L E L K+ + EL W+ EKA L + K +LE+A++ +E A+R G+ A+ SEL Sbjct: 366 EKLEELLKTKQNKVKELTAVWEKEKAELDTIKQAKEDLERARVELELAQRQGNFAKASEL 425 Query: 502 QYGKIPELEKQL-----EAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESER 556 +Y IP LE +L E AT LL + VT +IA V++R TGIPV+++M E Sbjct: 426 RYSIIPGLESKLPKEGSETATTTTADGEVLLHDSVTSDDIAAVVSRTTGIPVNKLMAGEI 485 Query: 557 EKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCK 616 EKL+ ME L V GQ+EA+ AV+NA+R RAGL+ N+P+ SF+FLGPTGVGKTELCK Sbjct: 486 EKLINMEDTLRQSVRGQDEALSAVANAVRMQRAGLSGENKPLASFMFLGPTGVGKTELCK 545 Query: 617 ALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILL 676 +A F+F ++ A++R DMSEF EKH+VSRL+G+P GYVG G RRR Sbjct: 546 KMAGFLFSTETAVLRFDMSEFQEKHTVSRLIGSPAGYVGTSPSG-----PRRR------- 593 Query: 677 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLI---QERFGELD 733 LTD QG +DFRNT++++TSNLG++++ GE Sbjct: 594 ---------------------LLTDAQGHKIDFRNTLIVLTSNLGAEMLVAADSSVGEEI 632 Query: 734 YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 793 + +K V+ +V ++ PEF+NRIDE ++F L + + I I+L+ L +RL++R + Sbjct: 633 SSDIKAAVMSIVQSSYPPEFLNRIDEFIIFKRLSKPALRDIVDIRLQELQQRLDDRRITL 692 Query: 794 HISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDR 852 + D L + GYDP YGARPL R I ++I N LA +I+ GE+V G+ + + N D+ Sbjct: 693 TVEDNVKDWLCDKGYDPRYGARPLNRLISKEIGNRLADKIIRGEVVTGQGVSVIFNADK 751 >UniRef50_O78410 ATP-dependent Clp protease ATP-binding subunit clpA homolog n=45 Tax=root RepID=CLPC_GUITH Length = 819 Score = 728 bits (1878), Expect = 0.0, Method: Composition-based stats. Identities = 352/856 (41%), Positives = 512/856 (59%), Gaps = 81/856 (9%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 +R T K + AQ A + F+ ++ L+ + G + +L S G+N R Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGVNLKDAR 60 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL-ESRG 120 ++ + + R ++ + RVL L + A++ G N+I +E +L + E G Sbjct: 61 VEVEKIIGRGSGFVAV--EIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEG 118 Query: 121 TLADILKAAGATTANITQAIEQMRGGE---SVNDQGAEDQRQALKKYTIDLTERAEQGKL 177 A +L+ + + ++ G S + + + L+++ +LT++A +GKL Sbjct: 119 VAARVLENLALDLTKVRTQVIRLLGDTAEVSATNGQTKGKTPTLEEFGSNLTQKAAEGKL 178 Query: 178 DPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRV 237 DPVIGR +EI R IQ+L RRTKNNP+LIGEPGVGKTAI EGLAQRI N +VP+ L+ +RV Sbjct: 179 DPVIGRQKEIERVIQILGRRTKNNPILIGEPGVGKTAIAEGLAQRINNRDVPDILEDKRV 238 Query: 238 LALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGN 297 + LD+G LVAG KYRGEFEERLK +++++ NVIL IDE+HT++GAG A+GA+DA N Sbjct: 239 VTLDIGLLVAGTKYRGEFEERLKKIIDEIRVAN-NVILVIDEVHTLIGAGAAEGAIDAAN 297 Query: 298 MLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERY 357 +LKPALARGE+ C+GATTL+EYR++IEKD+ALERRFQ V V EPSVE Sbjct: 298 ILKPALARGEMQCIGATTLEEYRKHIEKDSALERRFQPVMVGEPSVE------------- 344 Query: 358 ELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDR 417 I L RY +L S + +K + DR Sbjct: 345 ----------ETIEILYGLRDRYEKHHKL----------VISDEALSAAAKFADQYIADR 384 Query: 418 RIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKA 477 + K +D+++E S + + Sbjct: 385 FL-----------------PDKAIDLIDEAGSRVRLM----------NSQLPPAARELDK 417 Query: 478 ELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNK--VTDAE 535 EL + ++A R D +L+ ++ E++ Q+ A + + VT+ + Sbjct: 418 ELREILKQKDEAVRSQDFETAGQLRDREM-EIKAQIAAIAHSKKGDEENTKEVSVVTEED 476 Query: 536 IAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPN 595 IA+++A WTGIPV++M SE EKLL+ME+ LH R+IGQ+EAV AVS AIRR+R GL +PN Sbjct: 477 IAQIVAAWTGIPVNKMTRSESEKLLQMEETLHGRIIGQDEAVVAVSKAIRRARVGLKNPN 536 Query: 596 RPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVG 655 RPI SF+F GPTGVGKTEL KALA++ F S+EAMVR+DMSE+ME+H+VS+L+G+PPGYVG Sbjct: 537 RPIASFIFSGPTGVGKTELTKALASYFFGSEEAMVRLDMSEYMERHTVSKLIGSPPGYVG 596 Query: 656 YEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVI 715 Y EGG LTE+VRRRPY+V+L DE+EK HPDVFN+LLQ+L+DGRLTD +GRTVDF+NT++I Sbjct: 597 YNEGGQLTESVRRRPYTVVLFDEIEKGHPDVFNLLLQILEDGRLTDSKGRTVDFKNTLLI 656 Query: 716 MTSNLGSDLIQERFG-----------ELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFH 764 +TSN+GS +I++ G E Y +K LV + FRPEF+NR+DE++VF Sbjct: 657 LTSNVGSKVIEKGGGGLGFDLSEDQTESQYGRIKALVNEELKQYFRPEFLNRLDEIIVFR 716 Query: 765 PLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQ 824 L + + IA+I LK ++ R+ E+G ++ ++ L GY+P+YGARPL+RA+ + Sbjct: 717 QLTKDEVGEIAEIMLKEVFTRISEKGIQLEVTARFKTHLINEGYNPIYGARPLRRAVMRL 776 Query: 825 IENPLAQQILSGELVP 840 +E+ L+++ L+ ++ Sbjct: 777 LEDTLSEEFLAEKIKE 792 >UniRef50_A7JYI1 ATPases with chaperone activity, ATP-binding subunit n=15 Tax=Gammaproteobacteria RepID=A7JYI1_VIBSE Length = 892 Score = 728 bits (1878), Expect = 0.0, Method: Composition-based stats. Identities = 319/881 (36%), Positives = 499/881 (56%), Gaps = 40/881 (4%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 + RL ++AL DA +LA+ ++ H + +LL + LL+ + LR Sbjct: 10 IQRLHPIAKVALEDAAALAVSEKANEVQIEHYLLSLLERPNSDFDVLLSHFDCSENLLRQ 69 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQK-RGDNFISSELFVLAALES--- 118 + L+ +G G S L+ L ++ + I S +L + + Sbjct: 70 SVRSTLDT--SAKGNGSKPVFSALLIEWLQESWLVSSLDLSETQIRSGALLLTLVSNPLR 127 Query: 119 --RGTLADILKAAGATTA--NITQAIEQMRGGESVNDQ--GAEDQRQALKKYTIDLTERA 172 + A L+A + N + Q + + A + AL K+T D T +A Sbjct: 128 YGQHGYASTLEAVNPDSLKRNFAELTSQSIEAQVATSEKTQAREDGSALSKFTTDFTGKA 187 Query: 173 EQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGL 232 +G++DPV RD+EIR+ + +L RR KNNP+ +GEPGVGKTA+VEGLA +I+ G+VP+ L Sbjct: 188 RKGEIDPVFCRDQEIRQIVDILARRRKNNPIAVGEPGVGKTAVVEGLALKIVQGDVPDNL 247 Query: 233 KGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGA 292 KG + LDMG L AGA +GEFE+RL VL+++ +ILFIDE HT+VG G G Sbjct: 248 KGVELYGLDMGLLQAGASVKGEFEKRLNAVLDEVKNSPTPIILFIDEAHTLVGGGNQAGG 307 Query: 293 MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRG 352 DA N+LKPALARGE+ + ATT EY++Y EKD AL RRFQ V + EPS E I+RG Sbjct: 308 SDAANLLKPALARGEVKTIAATTWSEYKKYFEKDPALARRFQLVKLDEPSPEQAALIIRG 367 Query: 353 LKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEEL 412 L+ YE H+V + D AI AAA LS RYI+ RQLPDKAID++D A + + + +++ P + Sbjct: 368 LRPAYEKSHNVYVRDDAITAAAALSARYISGRQLPDKAIDVLDTACARVNISLNAIPASV 427 Query: 413 DRLDRRIIQLKLEQQALMKES-----DEASKKRLDMLNEELSDKERQYSELEEEWKAEKA 467 + L + + + E +AL +++ D+ S + L + + + +E E +W EK Sbjct: 428 ETLQQELAAQQRELEALERDALQQTGDKHSLANIPDLELAMETTKEELAEQEAQWHKEKE 487 Query: 468 SLSGTQTIKAEL---------EQAKIAIEQARRVGDLARMSELQYG----KIPELEKQLE 514 + +++ L E+ +A E + + D++ +E+ I ++QL+ Sbjct: 488 QIQEMIALRSRLHELVFGETNEEELVAEEDSEQEQDVSPYAEMDEEAVRIAISACQEQLD 547 Query: 515 AATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574 A L+ +V E++ V++ WTGIP+ +M++ E E L++++ L + GQ Sbjct: 548 AIRN----GNPLVHFEVGPDEVSHVISDWTGIPMGKMLQDEAETTLKLKESLTQSIKGQE 603 Query: 575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 634 A+DA+S I+ ++AGL +P+ P G FL +GP+GVGKTE +++A+ MF + M I+M Sbjct: 604 YAIDALSEGIQTAKAGLGNPDAPTGVFLLVGPSGVGKTETARSIADQMFGGERFMTTINM 663 Query: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694 SEF EKH+VSRL+G+PPGYVGY EGG LTEAVR+RPYSV+LLDEVEKA P+V N+ QV Sbjct: 664 SEFQEKHTVSRLIGSPPGYVGYGEGGMLTEAVRQRPYSVVLLDEVEKADPEVLNLFYQVF 723 Query: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE---RFGELDYAHMKELVLGVVSHNFRP 751 D G L DG+GRT+DF+NT++IMTSNL + I+ + ++D + E + ++ +F+P Sbjct: 724 DKGTLNDGEGRTIDFKNTLIIMTSNLATHEIESLVHQSKDIDANIIAEAIRPTLNQHFKP 783 Query: 752 EFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERG-YEIHISDEALKLLSENGYDP 810 + R+ V+ F PL ++ + I +L ++ +RL+ + + ++ + N Sbjct: 784 ALLARM-SVLPFVPLSDEAMTEIIHHKLNKVSQRLQSHHKLSLSYEESLVEFVLGNCRLA 842 Query: 811 VYGARPLKRAIQQQIENPLAQQILSGELVPGKV-IRLEVNE 850 GAR + I +Q+ L+ Q+L + I + V+E Sbjct: 843 ETGARNIDAVINRQLLPQLSTQLLVHDKDDSHTQIEVSVDE 883 >UniRef50_C1EC57 ATP-dependent clp protease n=2 Tax=Micromonas RepID=C1EC57_9CHLO Length = 1033 Score = 726 bits (1874), Expect = 0.0, Method: Composition-based stats. Identities = 358/888 (40%), Positives = 506/888 (56%), Gaps = 91/888 (10%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 ++ T + A+ AQ A + H++ L+ +E L G+ R Sbjct: 106 FEKFTERAIKAVMLAQQEAKALRRPEVGVEHIVMGLVAEEAKKGGWL--GTGVTIDSARE 163 Query: 63 DINQALN---RLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALE-S 118 + ++ + +V S+ RV + G N+I+ E LA E Sbjct: 164 KAKEIVSFDKDRAARRTSTSEVPFSRGAKRVFEAALNNSTNMGMNYIAPEHIALAVAELD 223 Query: 119 RGTLADILKAAGATTANITQAIEQMRGGESVNDQGA-------------------EDQRQ 159 +L + + + E+ E + G +D++ Sbjct: 224 DESLVKYFEMLSTSRTFVKNEAERRLKTEKEKESGPAARPNTSLAPRQRQQQASQKDEKS 283 Query: 160 ALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGL 219 L + DLT+RA K+DP+IGRDEE+ R IQ+L RR+KNNP+L+GEPGVGKTAI EGL Sbjct: 284 PLNDFCFDLTQRARDEKIDPIIGRDEEVERVIQILARRSKNNPILLGEPGVGKTAIAEGL 343 Query: 220 AQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDE 279 A RI++G VPE L+ +RVL+LD+G L+AGAK RGE E R+ G++ ++ ++ +V+L IDE Sbjct: 344 ALRIVSGNVPEFLREKRVLSLDVGLLMAGAKERGELESRVTGLIKEIQDKK-DVVLMIDE 402 Query: 280 LHTMVGAGKADGA----MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQK 335 +HT++GAG MD NMLKP LARGEL C+GATT+DE+R+YIEKDAALERRFQ Sbjct: 403 VHTLIGAGAVGKGGGGGMDISNMLKPPLARGELQCIGATTVDEHRKYIEKDAALERRFQP 462 Query: 336 VFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLID 395 V V EPS ED I IL GL+ERYE HH +ITD A++AA +S RYIADR LPDKAIDL+D Sbjct: 463 VMVEEPSEEDAIEILFGLRERYEAHHMCEITDDALIAAVQISSRYIADRFLPDKAIDLVD 522 Query: 396 EAASSIRMQIDSKPEELD-RLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQ 454 EA S+ R++ +E +D+ +E +K+ EA + + L E + R Sbjct: 523 EAGSAARIKQYMAQKERRGEVDKATSMEAMEMWRALKQVSEAKEAAVRGLLFEEATLLRD 582 Query: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLE 514 + +K L + + +++ G Sbjct: 583 RE----------------REVKTNLSKLGVKVDELTGDGAYGGA---------------- 610 Query: 515 AATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574 KVT EI V A W+GIPV RM E+ L M+Q+L VIGQ Sbjct: 611 ---------------KVTVDEIEAVAAMWSGIPVQRMTLDEQAILANMDQDLQGSVIGQE 655 Query: 575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 634 EAV AVS ++RR+R GL DPNRPI S LF GPTGVGKTEL K LA F S++ MVR+DM Sbjct: 656 EAVSAVSRSLRRTRCGLKDPNRPIASMLFAGPTGVGKTELTKRLAEKYFGSEDNMVRLDM 715 Query: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694 SE+ME+HSVS+LVGAPPGYVG+ +GG LTEAVRR+P++++L DE+EKAHPDVFNILLQ++ Sbjct: 716 SEYMERHSVSKLVGAPPGYVGFGQGGTLTEAVRRKPFTILLFDEIEKAHPDVFNILLQMM 775 Query: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLI-------------QERFGELDYAHMKELV 741 +DGRLTD QGR V F+N ++++TSN+GS +I + G +Y ++E V Sbjct: 776 EDGRLTDSQGRVVSFKNCLIVLTSNVGSKVIAKGGGGLGFQLQDDDEEGSAEYKRIREKV 835 Query: 742 LGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALK 801 L + + FRPE +NR+DE+V F L ++ + IA++ L+ R+ +G E+ ++ A+ Sbjct: 836 LDELKNFFRPEMLNRLDEIVCFKQLEKESVQRIARLMLRETAGRMRLKGMEMALTASAMD 895 Query: 802 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVN 849 L E G+D YGARPL+RAI I++ L++ +L G + G V ++ + Sbjct: 896 KLLETGFDKEYGARPLRRAITSIIDDNLSEAMLRGVIHEGDVAVIDYD 943 >UniRef50_C6HYE9 ATPase AAA-2 domain protein n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HYE9_9BACT Length = 890 Score = 724 bits (1870), Expect = 0.0, Method: Composition-based stats. Identities = 344/875 (39%), Positives = 511/875 (58%), Gaps = 42/875 (4%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 R++ A+ L L + I P H++ +LL+ V +L + GI+ G +R Sbjct: 10 FRRMSPILTRAVEQGAGLCLSRSHYEITPEHVVISLLDHPDSDVMKILAAEGIDGGSVRR 69 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQ-KRGDNFISSELFVLAALE---- 117 +++ AL+ L G GG S L+ VL +A R + S +F+ A + Sbjct: 70 EMSNALDDLR--SGNGGRPVFSPLLIEVLQDAHLIASINRNEPHTRSGVFLQAFVNRLSA 127 Query: 118 -SRGTLADILKAAGATTAN-----ITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTER 171 S G + L+ G + + GG + +G ++ A+ ++ D TE+ Sbjct: 128 YSSGRPSKSLERIGKERLKDQFDTLASGSAEAIGGGQESQEGPSEEGTAIGRFCEDFTEK 187 Query: 172 AEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEG 231 A +GK+DPV GRD E+R+ I +L RR KNNP+ +G+PGVGKTA+VE LA RI+ G+VPE Sbjct: 188 ARKGKIDPVFGRDAEVRQIIDILSRRRKNNPICVGDPGVGKTAVVESLALRIVEGDVPES 247 Query: 232 LKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADG 291 L R+L LDMGAL AGA +GEFE RLKGV+N++ VILFIDE HT++GAG A G Sbjct: 248 LSKVRLLGLDMGALEAGAGVKGEFENRLKGVINEIKASSVPVILFIDEAHTLIGAGGAQG 307 Query: 292 AMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILR 351 DA N+LKPALARGEL + ATT EY++Y EKDAAL RRFQ V + EPSVE I ILR Sbjct: 308 GGDAANLLKPALARGELRTIAATTWAEYKKYFEKDAALARRFQPVKLDEPSVETAILILR 367 Query: 352 GLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEE 411 GLK YE HHV I D A+VAAATLS RY+ R+LPDKA+DL+D +A+ IR+ SKPE+ Sbjct: 368 GLKAHYEAVHHVTIRDDALVAAATLSDRYLTGRKLPDKAVDLLDTSAARIRISQSSKPEK 427 Query: 412 LDRLDRRIIQLKLEQQALMKESD---EASKKRLDMLNEELSDKERQYSELEEEWKAEKAS 468 ++ L+RRI L+ E+ L+++ + +RLD + EL E++ S E W+ EK + Sbjct: 428 IEGLERRIQALEREKNGLVRDQTFGQDIPAERLDAIGRELGTLEQELSRQRERWEKEKTA 487 Query: 469 LSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLR 528 ++ + D R + + EL + A +++ ++ Sbjct: 488 VAELLAHRE----------------DPRREGPDRESWMKELRTKEAAVRKIQEDH-PMIH 530 Query: 529 NKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSR 588 +V +A V++ WTGIP+ +++ + + ++R+++ L RV+GQ A+ V IR SR Sbjct: 531 FEVDPETVARVVSNWTGIPLGKLLREQAQTVMRLQETLGERVLGQEPALARVGEIIRNSR 590 Query: 589 AGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVG 648 AG PN+P+G FL +GP+GVGKTE A+A+ +F ++A V ++MSEF EKH SRL+G Sbjct: 591 AGFKAPNQPVGIFLLVGPSGVGKTETALAVADILFGDEKATVTLNMSEFQEKHQASRLIG 650 Query: 649 APPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVD 708 +PPGYVGY EGG LTEAVR+RPYSV+LLDEVEKAHPD+ N+ QV D G L+DG+G+ +D Sbjct: 651 SPPGYVGYGEGGLLTEAVRQRPYSVVLLDEVEKAHPDILNMFYQVFDKGVLSDGEGKEID 710 Query: 709 FRNTVVIMTSNLGSDLIQE---RFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHP 765 F NTV+ +TSNL S+ + E Y + L+ +S +F+P + R+ +V + P Sbjct: 711 FSNTVIFLTSNLASEKLSAYALEHPEASYEDLVTLIRPDLSRHFKPALLARMT-IVPYLP 769 Query: 766 LGEQHIASIAQIQLKRLYKRL-EERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQ 824 L + + I +++ KRL + + G EI D + ++ GAR + +Q + Sbjct: 770 LRGEALGRIVRLKTKRLSRSFVQNNGVEIVFEDSLIDHVALQCETSEAGARNIDYLLQSR 829 Query: 825 IENPLAQQILSGELVPGKV---IRLEVNEDRIVAV 856 I ++++++ G LV G + +R+ + D + Sbjct: 830 ILPEISRELI-GRLVEGTLDGPVRVGIAPDGTTVI 863 >UniRef50_P42762 ERD1 protein, chloroplastic n=22 Tax=cellular organisms RepID=ERD1_ARATH Length = 945 Score = 724 bits (1868), Expect = 0.0, Method: Composition-based stats. Identities = 337/900 (37%), Positives = 494/900 (54%), Gaps = 110/900 (12%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +R T + A+ +Q A + HL+ L+ ++ +GI + R Sbjct: 80 FERFTERAIRAIIFSQKEAKSLGKDMVYTQHLLLGLIAEDRDP--QGFLGSGITIDKARE 137 Query: 63 DI----NQALNRLPQVEGTGG------DVQPSQDLVRVLNLCDKLAQKRGDNFISSELFV 112 + ++A + Q E + D+ S RV + ++ +I+ E Sbjct: 138 AVWSIWDEANSDSKQEEASSTSYSKSTDMPFSISTKRVFEAAVEYSRTMDCQYIAPEHIA 197 Query: 113 LAALE-SRGTLADILKAAGATTANITQAIEQMRGGESVND-------------------- 151 + G+ +LK GA +T A GE D Sbjct: 198 VGLFTVDDGSAGRVLKRLGANMNLLTAAALTRLKGEIAKDGREPSSSSKGSFESPPSGRI 257 Query: 152 ----QGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGE 207 G + + L+++ +DLT RA +G +DPVIGR++E++R IQ+L RRTKNNP+L+GE Sbjct: 258 AGSGPGGKKAKNVLEQFCVDLTARASEGLIDPVIGREKEVQRVIQILCRRTKNNPILLGE 317 Query: 208 PGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLA 267 GVGKTAI EGLA I P L +R+++LD+G L+AGAK RGE E R+ +++++ Sbjct: 318 AGVGKTAIAEGLAISIAEASAPGFLLTKRIMSLDIGLLMAGAKERGELEARVTALISEVK 377 Query: 268 KQEGNVILFIDELHTMVGAG-----KADGAMDAGNMLKPALARGELHCVGATTLDEYRQY 322 K G VILFIDE+HT++G+G +D N+LKP+L RGEL C+ +TTLDE+R Sbjct: 378 KS-GKVILFIDEVHTLIGSGTVGRGNKGSGLDIANLLKPSLGRGELQCIASTTLDEFRSQ 436 Query: 323 IEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIA 382 EKD AL RRFQ V + EPS ED + IL GL+E+YE HH+ + T AI AA LS RYIA Sbjct: 437 FEKDKALARRFQPVLINEPSEEDAVKILLGLREKYEAHHNCKYTMEAIDAAVYLSSRYIA 496 Query: 383 DRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLD 442 DR LPDKAIDLIDEA S R++ K +E Sbjct: 497 DRFLPDKAIDLIDEAGSRARIEAFRKKKE------------------------------- 525 Query: 443 MLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQ 502 + + + ++ +E K +A + + + + +++ + + + + Sbjct: 526 ---DAICILSKPPNDYWQEIKTVQAMHEVVLSSRQKQDDGDAISDESGELVEESSLPPAA 582 Query: 503 YGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRM 562 P L V +IA V + W+GIPV ++ ER L+ + Sbjct: 583 GDDEPIL---------------------VGPDDIAAVASVWSGIPVQQITADERMLLMSL 621 Query: 563 EQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFM 622 E +L RV+GQ+EAV A+S A++RSR GL DP+RPI + LF GPTGVGKTEL KALA Sbjct: 622 EDQLRGRVVGQDEAVAAISRAVKRSRVGLKDPDRPIAAMLFCGPTGVGKTELTKALAANY 681 Query: 623 FDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKA 682 F S+E+M+R+DMSE+ME+H+VS+L+G+PPGYVG+EEGG LTEA+RRRP++V+L DE+EKA Sbjct: 682 FGSEESMLRLDMSEYMERHTVSKLIGSPPGYVGFEEGGMLTEAIRRRPFTVVLFDEIEKA 741 Query: 683 HPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGEL---------- 732 HPD+FNILLQ+ +DG LTD QGR V F+N ++IMTSN+GS I + Sbjct: 742 HPDIFNILLQLFEDGHLTDSQGRRVSFKNALIIMTSNVGSLAIAKGRHGSIGFILDDDEE 801 Query: 733 --DYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERG 790 Y MK LV+ + + FRPE +NRIDE+V+F L + + I + L+ L RL G Sbjct: 802 AASYTGMKALVVEELKNYFRPELLNRIDEIVIFRQLEKAQMMEILNLMLQDLKSRLVALG 861 Query: 791 YEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNE 850 + +S+ +L+ + GYDP YGARPL+R + + +E+PL++ L+G PG + +++ Sbjct: 862 VGLEVSEPVKELICKQGYDPAYGARPLRRTVTEIVEDPLSEAFLAGSFKPGDTAFVVLDD 921 >UniRef50_A6FFT5 Putative ATPase with chaperone activity n=1 Tax=Moritella sp. PE36 RepID=A6FFT5_9GAMM Length = 865 Score = 719 bits (1857), Expect = 0.0, Method: Composition-based stats. Identities = 309/876 (35%), Positives = 473/876 (53%), Gaps = 46/876 (5%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +D+L + AL A L +E H + L+ + ++ + GI+ L Sbjct: 10 VDKLNQNGKKALEGAAGLCHSRSQFTVEIEHWLLQLVENKQDDIAIICQLQGIDVQVLIN 69 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTL 122 ++N +L R Q G S ++ +L D +L L S ++ Sbjct: 70 ELNLSLER--QKTGNSAAPSLSPHIITLLRQSWLNTTIEFDEQQIRSGIILYTLLSDDSI 127 Query: 123 ADILKAAGATTANITQAIEQMRGGESVNDQG--------------AEDQRQALKKYTIDL 168 +L ++ + + + +L ++T+DL Sbjct: 128 NAMLSRHIRQFERLSANLIRDNWSIITEKSAEQNGIVAVSNAGVATNSKTPSLDQFTVDL 187 Query: 169 TERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEV 228 TE+A GK+DP++GRD EIR+ + +L RR +NNP+L GE GVGKTA+VEGLAQRI+ +V Sbjct: 188 TEKARNGKMDPILGRDPEIRQMVDILTRRRQNNPILTGEAGVGKTAVVEGLAQRIVAKDV 247 Query: 229 PEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGK 288 PE L+ ++ LD+ L AGA +GEFE RLK VLN++ + +ILFIDE HTM+GAG Sbjct: 248 PESLQHVQLRELDLALLQAGAGMKGEFENRLKAVLNEVKQSATPIILFIDEAHTMIGAGG 307 Query: 289 ADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIA 348 A G DA N+LKPALARGEL + ATT EY++Y EKD AL RRFQ V + EPSV + Sbjct: 308 AAGQNDAANILKPALARGELRTIAATTWAEYKKYFEKDPALTRRFQVVKIEEPSVPTAVI 367 Query: 349 ILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSK 408 +LRG+ E HH V IT A+ AA LS RYI RQLPDKA+ L+D A + + + + Sbjct: 368 MLRGILPVMEQHHDVVITADALQAAVALSKRYINGRQLPDKAVALLDSACARVAISQAAT 427 Query: 409 PEELDRLDRRIIQLKLEQQALMKES--DEASKKRLDMLNEELSDKERQYSELEEEWKAEK 466 P ++ L R+ QL+ E + L +E E + L +L E + WK + Sbjct: 428 PGLVEDLQRKKAQLEAEIKLLEREQLSGEDHGDVIIALQSDLVGVEDNLVVELQAWKTQS 487 Query: 467 ASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRL 526 + Q A++ + E +Y ++ L+ +L A + Sbjct: 488 ELVQAIQQQIADIHEHGAEQE--------------KYIRLTALKAELHEAKN------TM 527 Query: 527 LRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRR 586 + +V + I EV++ WTGIP+ +M + E E +L + E+ RVIGQ+ A+D ++ ++ Sbjct: 528 VYWQVDEQVICEVISDWTGIPLGKMAQDELETVLNLSAEMKTRVIGQDHAIDLIARTVQI 587 Query: 587 SRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRL 646 SRA L+D ++P G F+ GP+GVGKTE LA ++ S+E ++ I+MSE+ E+H VS L Sbjct: 588 SRAQLSDESKPNGIFMLTGPSGVGKTETALTLAEQVYGSEENIITINMSEYKEEHKVSLL 647 Query: 647 VGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRT 706 +G+PPGYVG+ EGG LTEAVRR PYSV+LLDE++KA P V +I Q+ D G + DG+GR Sbjct: 648 LGSPPGYVGFGEGGVLTEAVRRNPYSVVLLDEIDKAAPGVQDIFYQIFDKGCVKDGEGRD 707 Query: 707 VDFRNTVVIMTSNLGSDLIQERFGELDYA----HMKELVLGVVSHNFRPEFINRIDEVVV 762 +DF+NT++IMTSN+G+D I F + D A + + + G + F+P F+ R + ++ Sbjct: 708 IDFKNTIIIMTSNVGTDTITALFADPDTAPELDSLADCIKGDLMAAFKPAFLGRAN-IIP 766 Query: 763 FHPLGEQHIASIAQIQLKRLYKRLEE-RGYEIHISDEALKLLSENGYDPVYGARPLKRAI 821 F PL + +++IAQ+Q+ RL R+ E + +E + + +D GAR + + Sbjct: 767 FVPLTDDMLSTIAQLQINRLAARIRRNHNAEFIVDNEVITQIVSRCHDVASGARTIHNYL 826 Query: 822 QQQIENPLAQQILSG--ELVPGKVIRLEVNEDRIVA 855 Q + ++ Q+L + I + NED + Sbjct: 827 QNTLLPEISVQVLQAMTQQTEFSQINVTTNEDNFII 862 >UniRef50_Q6KHS7 ATP-dependent Clp protease, ATPase subunit n=3 Tax=Mycoplasma RepID=Q6KHS7_MYCMO Length = 711 Score = 719 bits (1856), Expect = 0.0, Method: Composition-based stats. Identities = 338/705 (47%), Positives = 510/705 (72%), Gaps = 9/705 (1%) Query: 154 AEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKT 213 D LK++ +LT+ A++ L+PVIGR++EIRR I++L R+TKNNPVL+GEPGVGKT Sbjct: 7 KPDDNDPLKQFGRNLTDLAKKNMLEPVIGREDEIRRIIRILSRKTKNNPVLVGEPGVGKT 66 Query: 214 AIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNV 273 AIVEGLA++I + +VPE LK + V+ + + +L+AGA Y+G+FEER+K +++ + K +G Sbjct: 67 AIVEGLAKKIHDAQVPEDLKNKEVIEISLPSLIAGASYQGQFEERIKSLMDKIEKNQGKY 126 Query: 274 ILFIDELHTMVGAGK--ADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALER 331 I+FIDE+H ++G GK ++ MDA N+ KPALARG++ VGATT++EYR+YIE D+ALER Sbjct: 127 IIFIDEIHLLIGTGKNSSNSTMDAANIFKPALARGQMQLVGATTIEEYRKYIESDSALER 186 Query: 332 RFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAI 391 R QKV VAEP++EDTI ILRG+K R+E H+V+I+D A++AAA LS RYI+DR LPDKAI Sbjct: 187 RMQKVKVAEPNIEDTITILRGIKGRFETFHNVKISDKALIAAANLSARYISDRFLPDKAI 246 Query: 392 DLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDK 451 DL+DEAAS+I+ +I+S+PEEL+++ ++II + E+ AL E+ S R++ LN EL Sbjct: 247 DLVDEAASTIKTEINSQPEELEKIQQKIITFETEKAALKSENTIQSNLRVEELNNELKKL 306 Query: 452 ERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEK 511 ++ L E+W +EK + K ++E K + + + G + S++ Y +P++EK Sbjct: 307 NSEHKILSEKWISEKNVVIELNDKKRKIESLKHEVSKLQNEGLYEKASKIMYSDLPKIEK 366 Query: 512 QLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVI 571 +L+ L + L++ VT+ EIAE++++WT IP+S+++E +++KLL ++ EL +V Sbjct: 367 ELKILENLNKEKNSLIKEDVTENEIAEIVSKWTMIPISKLLEKQKDKLLNLQSELKKQVK 426 Query: 572 GQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVR 631 GQ EA++ VS+ I RSRA + DPN+PIGSF+F+GPTGVGKTEL K+LA +FDS + ++R Sbjct: 427 GQEEAIELVSDTILRSRANINDPNKPIGSFIFMGPTGVGKTELAKSLAYVLFDSKKQLIR 486 Query: 632 IDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILL 691 +DMSE+ EKHS+S+++G+PPGY+GYE GG LTE +R++PYS++L DE+EKAHPDV N+LL Sbjct: 487 LDMSEYSEKHSISKIIGSPPGYIGYENGGQLTELIRQKPYSIVLFDELEKAHPDVLNVLL 546 Query: 692 QVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRP 751 Q+LDDG LTD +G+T++F+NT++IMT+NLGSDLI E+ + + + ++ +P Sbjct: 547 QILDDGILTDAKGKTINFKNTIIIMTTNLGSDLILEKVYD------PKELRKILLKFVKP 600 Query: 752 EFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALKLLSENGYDP 810 EF+NRIDE++ F L + I I + +L L KR + + I D ++ +S+ GYD Sbjct: 601 EFLNRIDEIIPFKELDKDTIKEIIENELNELEKRVYQNQTIFIKFDDSIVEYISKQGYDN 660 Query: 811 VYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855 +YGARPLKR IQ +I++ +A I+SG L P + + + + +V Sbjct: 661 LYGARPLKRVIQNKIQSKIALNIISGNLKPNESYIILIENENLVI 705 >UniRef50_Q9PKA8 Probable ATP-dependent Clp protease ATP-binding subunit n=25 Tax=Bacteria RepID=CLPC_CHLMU Length = 870 Score = 719 bits (1855), Expect = 0.0, Method: Composition-based stats. Identities = 339/873 (38%), Positives = 518/873 (59%), Gaps = 101/873 (11%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 ++ TN+ + + A+ A ++ ++ H++ LL G +L + G++ Sbjct: 16 FMFEKFTNRAKQVIKLAKKEAQRLNHNYLGTEHILLGLLKLGQGVAVNVLRTLGVDFDTA 75 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL-ESR 119 + ++ + + P+++ GD + + + ++ A N++ +E +L L ++ Sbjct: 76 KNEVERLIGYGPEIQ-VYGDPALTGRVKKSFESANEEASILEHNYVGTEHLLLGILNQAD 134 Query: 120 GTLADILKAAGATTANITQAIEQ------------------------------MRGGESV 149 G +L+ I + I + G Sbjct: 135 GVALQVLENLHIDPKEIRKEILKELETFNLQLPPSSSITPRNTNSSSSSSSKSSSLGGHS 194 Query: 150 NDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPG 209 ++ ALK Y DLTE ++ +LDPVIGR E+ R I +L RR KNNPVLIGE G Sbjct: 195 LGGDKPEKLSALKAYGYDLTEMFKEARLDPVIGRSAEVERLILILCRRRKNNPVLIGEAG 254 Query: 210 VGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQ 269 VGKTAIVEGLAQ+I++GEVPE L+ +R++ LD+ ++AG KYRG+FEER+K V++++ K Sbjct: 255 VGKTAIVEGLAQKIVSGEVPEALRKKRLITLDLALMIAGTKYRGQFEERIKAVMDEVRKH 314 Query: 270 EGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAAL 329 GN++LFIDELHT+VGAG A+GA+DA ++LKPALARGE+ C+GATTLDEYR++IEKDAAL Sbjct: 315 -GNILLFIDELHTIVGAGAAEGAIDASHILKPALARGEIQCIGATTLDEYRKHIEKDAAL 373 Query: 330 ERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDK 389 ERRFQK+ V PSV++T+ ILRGLK++YE HH+V ITD A+VAAA LS +Y+ R LPDK Sbjct: 374 ERRFQKIVVQPPSVDETVEILRGLKKKYEEHHNVFITDEALVAAAKLSDQYVHGRFLPDK 433 Query: 390 AIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELS 449 AIDL+DEA + +R+ +P EL RL+ I K QA + ++ L +E Sbjct: 434 AIDLLDEAGARVRVNTMGQPSELLRLEAEIESTK---QAKEQAIGTQEYEKAASLRDEEK 490 Query: 450 DKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPEL 509 + S ++++W++ K + E ++ + Sbjct: 491 KLREKLSNMKQQWESNKEEHQVP-------------------------VDEEAVAQVVSV 525 Query: 510 EKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHR 569 + + AA E ++ +LL M+E+ +K + Sbjct: 526 QTGIPAARLTEAESEKLL-----------------------MLENTLQK----------K 552 Query: 570 VIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAM 629 VIGQ++AV ++ AIRRSR G+ DPNRP+GSFLFLGPTGVGKT L + +A MF ++++ Sbjct: 553 VIGQDQAVASICRAIRRSRTGIKDPNRPMGSFLFLGPTGVGKTLLAQQIAVEMFGGEDSL 612 Query: 630 VRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNI 689 +++DMSE+MEK + ++++G+PPGYVG+EEGG+LTE VRRRPY V+L DE+EKAHPD+ ++ Sbjct: 613 IQVDMSEYMEKFAATKMMGSPPGYVGHEEGGHLTEQVRRRPYCVVLFDEIEKAHPDIMDL 672 Query: 690 LLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQER-------FGELDYAHMKELVL 742 +LQ+L+ GRLTD GR +DFRNT++IMTSNLG+DLI++ +DY +KE + Sbjct: 673 MLQILEQGRLTDSFGRKIDFRNTIIIMTSNLGADLIRKTGEIGFGLRSHMDYGVIKEKID 732 Query: 743 GVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKL 802 V + +PEFINR+DE V+F PL ++ ++ I +++ +L RL+ ++I D + Sbjct: 733 AAVKKHLKPEFINRLDESVIFKPLEKEALSEIIHLEINKLGSRLQNHQMALNIPDSVVSF 792 Query: 803 LSENGYDPVYGARPLKRAIQQQIENPLAQQILS 835 L + G+ P GARPL+R ++Q +E+PLA+ +L Sbjct: 793 LVDKGHSPEMGARPLRRVVEQYLEDPLAEMLLK 825 >UniRef50_Q1WVA6 Negative regulator of genetic competence n=19 Tax=Bacteria RepID=Q1WVA6_LACS1 Length = 830 Score = 719 bits (1855), Expect = 0.0, Method: Composition-based stats. Identities = 347/874 (39%), Positives = 515/874 (58%), Gaps = 83/874 (9%) Query: 4 DRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTD 63 +R T + L AQ A +Q I HL+ AL ++ G + +L S + +R + Sbjct: 5 ERYTPSAKQVLVLAQQQANYFKHQAIGTEHLLLALTMEKNGVAAKVLQSFVVTEVDVREE 64 Query: 64 INQALNRLP-QVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTL 122 I + Q G + S VL + A+ + +E +LA LE T+ Sbjct: 65 IEHIVGYGNLQRRGADTYLPYSPRTRYVLERAREHAKLFNVEKVGTEHILLALLEDDKTI 124 Query: 123 A-DILKAAGATTANIT-----------QAIEQMRGGESVNDQGAEDQRQALKKYTIDLTE 170 + IL A + + R +++++ ++ L + DLTE Sbjct: 125 SSRILAALNIDLRKVKNITYRTMGVDATTANRTRKKLALSEKKQDNGTPTLDELARDLTE 184 Query: 171 RAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPE 230 + ++DPV+GRD EI+R +Q+L RRTKNNPVL+GEPGVGKTA+ EG +Q+I+NGEVP+ Sbjct: 185 MVRKDQIDPVVGRDNEIKRVVQILSRRTKNNPVLLGEPGVGKTAVAEGFSQKIVNGEVPD 244 Query: 231 GLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKAD 290 LK +RV+ LDMG+LVAG KYRGEFE+RLK ++ ++ +++GNVILFIDE+HT++GAG A+ Sbjct: 245 NLKNKRVMMLDMGSLVAGTKYRGEFEDRLKKIIEEI-REDGNVILFIDEMHTLIGAGGAE 303 Query: 291 GAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAIL 350 GA+DA N+LKPALARGE+ +GATTL+EY++Y+E DAALERRF V + EP+ E + IL Sbjct: 304 GAIDASNILKPALARGEVQVIGATTLNEYQKYVEADAALERRFASVTINEPTPEVALTIL 363 Query: 351 RGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPE 410 +GL+ +YE HH +QITD A+ +A LS RYIA R LPDKAIDL+DEAA+ +R+ K + Sbjct: 364 KGLRPKYEKHHQLQITDEALESAVKLSKRYIASRFLPDKAIDLMDEAAARVRINNAQKVD 423 Query: 411 ELDRLDRRIIQLKLEQ-QALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASL 469 ++ + +++ +L E+ +AL+KE E + + + + E+Q ++E + + Sbjct: 424 KVSAIKKKLSELSQEKTEALLKEDFEKAAEIRNEELKIQEKLEKQIQRDKDEEDSNNYRV 483 Query: 470 SGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRN 529 T AE+ + + +++ + ++ LEK L + + ++ + Sbjct: 484 KVTAEDIAEVVSEWTGVP-------VTQINRSEGDRLIRLEKILHNRVIGQDEAVKAVSK 536 Query: 530 KVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA 589 + RR+R+ Sbjct: 537 AI-----------------------------------------------------RRARS 543 Query: 590 GLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGA 649 GL DP RPIGSF+FLGPTGVGKTEL KALA MF S+++M+RIDMSE+MEK++ SRL+G+ Sbjct: 544 GLKDPTRPIGSFMFLGPTGVGKTELAKALAEAMFGSEDSMIRIDMSEYMEKYTTSRLIGS 603 Query: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709 PPGYVGY+EGG LTE VR PYSV+LLDEVEKAH DVFNILLQVLDDG LTD +GR VDF Sbjct: 604 PPGYVGYDEGGQLTEKVRNNPYSVVLLDEVEKAHNDVFNILLQVLDDGFLTDSKGRKVDF 663 Query: 710 RNTVVIMTSNLGSDLIQERFG--------ELDYAHMKELVLGVVSHNFRPEFINRIDEVV 761 RNT++IMTSNLG+ +++ DY M V + FRPEF+NR+DE+V Sbjct: 664 RNTIIIMTSNLGATALRDEKSVGFGAKDVSDDYEAMAAKVRETLKKTFRPEFLNRLDEIV 723 Query: 762 VFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAI 821 VFH L ++ I I ++ K + R++E+ + I+ A+ +++E G+D YGARP++R + Sbjct: 724 VFHSLNKEEIHQIVKLMAKNIIDRIKEQNINLKITPAAIDIVAEAGFDAEYGARPIRRIL 783 Query: 822 QQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855 Q +IE+ L++++L+G + G + + + I Sbjct: 784 QDKIEDLLSEELLAGNIETGATVTIGAKKGEITI 817 >UniRef50_Q54316 Hemolysin B n=25 Tax=cellular organisms RepID=HLYB_TREHY Length = 828 Score = 718 bits (1853), Expect = 0.0, Method: Composition-based stats. Identities = 358/871 (41%), Positives = 532/871 (61%), Gaps = 83/871 (9%) Query: 5 RLTNKFQLALAD-AQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTD 63 LT+K + + AQ A ++ + P H++ LL + + +L I+ +L+ + Sbjct: 5 HLTSKAKKVIELYAQEEAKRLNHDMVTPEHILLGLLYESEALATRVLMRLKIDLDRLKLE 64 Query: 64 INQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL-ESRGTL 122 + A+ + G + + + ++++ + A+ N+I +E +L L E GT Sbjct: 65 LESAMVK-SSTTKVFGTLPTAPRVQKLISRSAEEARALSHNYIGTEHLLLGLLREESGTA 123 Query: 123 ADILKAAGATTANITQAIEQM----------RGGESVNDQGAEDQRQALKKYTIDLTERA 172 ++L + G + Q I +M S D + + L ++ DLT+ A Sbjct: 124 YNVLTSMGLELTILRQEILKMLGVAGSNISSMEQTSQEDNVKKVKTPTLDQFARDLTKMA 183 Query: 173 EQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGL 232 LD VIGR+ E+ R +Q+L RR KNNP+L+GEPGVGKTAIVEGLA++I+ +VP+ L Sbjct: 184 RDKALDRVIGRENEVMRVVQILSRRKKNNPILLGEPGVGKTAIVEGLAEKIVAADVPDIL 243 Query: 233 KGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGA 292 +RVL LD+ ++VAG KYRGEFEER+K ++ ++ K N+I+FIDELHT++GAG A+GA Sbjct: 244 LKKRVLTLDLSSVVAGTKYRGEFEERIKNIVLEIKKA-SNIIIFIDELHTLIGAGGAEGA 302 Query: 293 MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRG 352 +DA NMLKPAL+RGE+ C+GATT++EY++YIEKD AL RRFQ + V EPS+EDTI IL G Sbjct: 303 LDAANMLKPALSRGEIQCIGATTINEYKKYIEKDGALVRRFQPINVEEPSIEDTIEILNG 362 Query: 353 LKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEEL 412 +K +YE HH V+ TD AI AAA LS RYI +R LPDKAIDLIDEA S R+ ++P+E Sbjct: 363 IKGKYEEHHKVKYTDEAINAAAVLSKRYIFERHLPDKAIDLIDEAGSRARLLNMTRPQEF 422 Query: 413 DRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGT 472 L+++I +L +++ +++ + + + +E++ + + S+ EE+ + E+ + Sbjct: 423 KDLEKKIEELNQQKKRVVESQNFEDAAK---IRDEITSLQEELSKKEEKCREEREKIETF 479 Query: 473 QTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVT 532 +E +R + +++T Sbjct: 480 ----------------------------------------------IEEDDIRHVISEIT 493 Query: 533 DAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLA 592 + I ++ SE ++L+ ME+ELH +V+GQ EA+ ++S AIRRSRAGL Sbjct: 494 NIPIKR------------LLNSESKRLIGMEEELHQKVVGQKEAISSISKAIRRSRAGLK 541 Query: 593 DPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPG 652 RP+GSF+FLGPTGVGKT L K L+ FMF +A++RIDMSEFMEK +VSRL+GAPPG Sbjct: 542 TSKRPLGSFIFLGPTGVGKTALAKVLSEFMFGDSDALIRIDMSEFMEKFAVSRLIGAPPG 601 Query: 653 YVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNT 712 YVGYEEGG LTE VRR+PYS+IL DE+EKAHPDV NILLQVL++G+LTD GR VDF NT Sbjct: 602 YVGYEEGGGLTEKVRRKPYSLILFDEIEKAHPDVTNILLQVLEEGQLTDNFGRKVDFSNT 661 Query: 713 VVIMTSNLGSDLIQERF--------GELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFH 764 ++I+TSNLG+ I + E D +K L + NF PEF+NRID+++VFH Sbjct: 662 IIIITSNLGARDIVKGSSLGFNAVGSEKDANDIKNFALEELKQNFNPEFLNRIDDIIVFH 721 Query: 765 PLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQ 824 L ++ + I I LK L + ++ER I++S+EA + + G+D YGAR L+RAIQ++ Sbjct: 722 TLSKEDLKDIINIMLKELNEAIKERNIVINLSEEAKNYIIDKGFDKKYGARSLRRAIQKE 781 Query: 825 IENPLAQQILSGELVPGKVIRLEVNEDRIVA 855 IE+ ++ +IL G + G I ++ N+ ++ Sbjct: 782 IEDYVSTEILFGNIEDGDTINVDRNDGSLIF 812 >UniRef50_A1STR4 Chaperone endopeptidase Clp ATP-binding chain B,ClpB n=3 Tax=Gammaproteobacteria RepID=A1STR4_PSYIN Length = 828 Score = 717 bits (1850), Expect = 0.0, Method: Composition-based stats. Identities = 377/863 (43%), Positives = 516/863 (59%), Gaps = 72/863 (8%) Query: 5 RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL-RTD 63 + T K L A + + L+ ALL+Q +L N Sbjct: 20 KSTQKVIGCLEIAFAELGSLRLNILTSDFLLVALLSQPDSEAHKILQELLPNEDDAPLRI 79 Query: 64 INQALNRLPQVEGTGG-DVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESR-GT 121 + Q + P + SQ++V V + A+ GD++I + LA G Sbjct: 80 VGQIRQKYPPASNVQARQILASQEIVEVFRVAYDEAKDFGDDYIGTGTLFLAFFHKDAGH 139 Query: 122 LADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVI 181 +ADIL G QA++ +R G +N Q AE + L YT DLTE A +G+LDPVI Sbjct: 140 VADILNNEGIRVDQARQALKHIRRGHQLNSQDAEGKPDILDIYTKDLTEMARKGELDPVI 199 Query: 182 GRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALD 241 GR+EEI IQ L RR KNNP LIGEPGVGKT IVEGLAQRI+ +VP+ +R+LALD Sbjct: 200 GREEEIELIIQTLSRRKKNNPALIGEPGVGKTVIVEGLAQRIVAADVPDSQLNKRLLALD 259 Query: 242 MGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKP 301 MG LVAGA RGEFEERLK V + + + G VILFIDELHT+VGA G +DA ++LK Sbjct: 260 MGELVAGASMRGEFEERLKSVRDAVIEAGGKVILFIDELHTVVGANAGSGGIDAPSLLKT 319 Query: 302 ALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHH 361 ALA+G L +GA TLDEY++YIE D ALERRF + V EPS+E+TIAIL+G RYE HH Sbjct: 320 ALAQGTLQVIGADTLDEYQKYIETDKALERRFHPILVREPSIEETIAILQGAAPRYEKHH 379 Query: 362 HVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQ 421 + PA AAA LS RYIADR LPDKA+DLIDEA + + Sbjct: 380 DIHYALPAFEAAARLSERYIADRCLPDKAVDLIDEAGARKHL------------------ 421 Query: 422 LKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQ 481 RL + + L D ER++ L + + + Q ++E Sbjct: 422 ------------------RLTAIPQNLRDLERKHQGLLRDKTGAFNAQNFEQVAATQMEI 463 Query: 482 AKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLA 541 K +++L+ A + VT +IAEV+A Sbjct: 464 LKS-------------------------DQKLKEARSDWQQGRAKEDAMVTSDDIAEVVA 498 Query: 542 RWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSF 601 RWTGIPV+RM+ESE EKL RME++LH R++GQ +AV AV++AIRR+RAG+ + RPIGSF Sbjct: 499 RWTGIPVARMVESESEKLARMEEKLHQRIVGQEDAVRAVADAIRRNRAGITNSRRPIGSF 558 Query: 602 LFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGY 661 LFLGPTGVGKTEL +ALA F+ D + ++R+DMSE+ME+H VS+++GAPPGY+GY EGG Sbjct: 559 LFLGPTGVGKTELARALAAFLLDDETRIIRLDMSEYMERHEVSKMIGAPPGYIGYGEGGQ 618 Query: 662 LTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLG 721 LTE VR PY+V+LLDE+EKAHPDVFN+LLQ+L+DG+LTD +GR V FRNTV+I TSNLG Sbjct: 619 LTERVRHNPYTVVLLDEMEKAHPDVFNMLLQILEDGQLTDAKGRKVSFRNTVIIGTSNLG 678 Query: 722 SDLIQE--------RFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIAS 773 + + L+Y ++LV+ V F+PEF+NR+D+++VFH L ++H+ Sbjct: 679 TGSLSPDKRPIGFIHSDSLNYKETQDLVMHEVKKFFKPEFLNRLDDIIVFHYLEKEHVRQ 738 Query: 774 IAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQI 833 IAQ+ + L +R++ RG + + + + LS +G+DP+YGARPL+R +++QIEN LA ++ Sbjct: 739 IAQMFVAELVERMKLRGIVLEVDNAVIDKLSADGFDPIYGARPLRREVERQIENVLAMKV 798 Query: 834 LSGELVPGKVIRLEVNEDRIVAV 856 + E V+++++ + IV + Sbjct: 799 VRNEFSDNSVVQVKMQDKEIVFL 821 >UniRef50_A6X7G2 ATPase AAA-2 domain protein n=64 Tax=cellular organisms RepID=A6X7G2_OCHA4 Length = 964 Score = 716 bits (1848), Expect = 0.0, Method: Composition-based stats. Identities = 363/862 (42%), Positives = 510/862 (59%), Gaps = 74/862 (8%) Query: 4 DRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTD 63 DRL+ + L DA A ++ HL+ AL + + V +L ++ LR Sbjct: 116 DRLSEQGNKLLQDAAQKAGEFGRSEVDTEHLLLALTSSD--VVKTILEQFKVDVDDLRRQ 173 Query: 64 INQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES-RGTL 122 I + R T G++ S L LN + + G +++ E ++ E G Sbjct: 174 IEKEAKRGD--AKTDGEIGVSPRLKDALNRAFIASNELGHSYVGPEHLLIGLAEEGEGLA 231 Query: 123 ADILKAAGATTANITQAIEQMR-GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVI 181 A +L+ G T + Q + ++ G L +++ DLT+ A +GKLDPVI Sbjct: 232 AAMLRKLGLTPQALRQQVTKVVGKGAEEGRVETPSNTPDLDQFSRDLTKLAREGKLDPVI 291 Query: 182 GRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALD 241 GR EI TI+VL RR KNNPVLIGEPGVGKTAIVEGLAQRI+ GEVPE L+ +R++ L+ Sbjct: 292 GRAREIETTIEVLARRKKNNPVLIGEPGVGKTAIVEGLAQRIVAGEVPEALRDKRLVELN 351 Query: 242 MGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMV--GAGKADGAMDAGNML 299 + ++VAG+KYRGEFEER++ +L ++ +++ ++ILFIDE+HT+V G G +G +D N Sbjct: 352 INSMVAGSKYRGEFEERVQKILKEITEEKDSLILFIDEMHTIVGAGQGGGEGGLDIANTF 411 Query: 300 KPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYEL 359 KPALARGEL+ +GATTL+EY++YIEKDAALERRFQ V+V EP+V TI ILRGL++ E Sbjct: 412 KPALARGELNLIGATTLNEYQKYIEKDAALERRFQPVYVDEPTVAQTIMILRGLRDTLES 471 Query: 360 HHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRI 419 HH V ITD AI+AAA LS RYI R +PDKAIDLID+AA+ +++ ++P ++ L+ + Sbjct: 472 HHKVTITDEAIIAAAELSDRYITGRFMPDKAIDLIDQAAARVKISATARPVDVQELEAEV 531 Query: 420 IQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAEL 479 Q+K EQ + R L +EL K+++ EL E WK ++AS T ++A+ Sbjct: 532 AQIKREQD---YAAARKQFDRAAELKKELEQKQKELDELLEIWKRDQAS--ATAEVRADH 586 Query: 480 EQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEV 539 ++ V +L + K+ +LE++L + + +R + + V Sbjct: 587 VAQIVSKITGVPVTELTTEEK---DKLLKLEEKLHERVIGQEEAIRAVADAV-------- 635 Query: 540 LARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIG 599 R +RAGL + P Sbjct: 636 ---------------------------------------------RLARAGLREGRGPTA 650 Query: 600 SFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEG 659 +FLFLGPTGVGKTEL K LA +F +A++RIDMSE+ E+HSV+RLVGAPPGYVGY+EG Sbjct: 651 TFLFLGPTGVGKTELAKTLAEVIFGDQDAIIRIDMSEYGERHSVARLVGAPPGYVGYDEG 710 Query: 660 GYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSN 719 G LTE VRRRPYSV+LLDE+EKAHPDV+NILLQV DDGRLTDG+GR VDF NT++I TSN Sbjct: 711 GQLTEKVRRRPYSVVLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSN 770 Query: 720 LGSDLIQERF-----GELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASI 774 LGSD+IQ E D A K ++ V+ +FRPEFINRIDE++VFH L + I I Sbjct: 771 LGSDIIQRNLTKRGSSEFDEAKQKSELMEVLRGHFRPEFINRIDEIIVFHSLNQSEIRQI 830 Query: 775 AQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQIL 834 ++QL R+ + +G E+ + + G+ P +GAR L+R I+ Q+E LA+++L Sbjct: 831 VELQLNRVKRTALTQGVELELDVSVVDHFGAVGFRPEFGARELRRLIRSQLETELAREML 890 Query: 835 SGELVPGKVIRLEVNEDRIVAV 856 SG + G +R+ +ED V Sbjct: 891 SGRIEDGDKVRVAWSEDEQRVV 912 >UniRef50_Q7NAZ3 Chaperone protein clpB n=5 Tax=Mollicutes RepID=CLPB_MYCGA Length = 717 Score = 714 bits (1842), Expect = 0.0, Method: Composition-based stats. Identities = 328/706 (46%), Positives = 486/706 (68%), Gaps = 15/706 (2%) Query: 153 GAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGK 212 +++ L KY+ +L + + +DP IGR+EEIRR I++L R+ KNNPVLIGEPGVGK Sbjct: 6 TPTEEKNVLSKYSRNLNDEIARNAIDPTIGREEEIRRLIEILSRKNKNNPVLIGEPGVGK 65 Query: 213 TAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGN 272 TAIVEG A++I+NG+VP+ LK V+ L + +L+AG +++G FEERL +L ++ G Sbjct: 66 TAIVEGFARKIVNGDVPDNLKDVEVVELSLSSLIAGTQFQGSFEERLNKILKEVKNSSGK 125 Query: 273 VILFIDELHTMVGAGK--ADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALE 330 VILFIDE+H +VG GK ++ AMDA N+LKP +ARGE+ +GATT+DEYR+YIEKD ALE Sbjct: 126 VILFIDEIHQLVGMGKNSSNSAMDAANILKPMMARGEIKVIGATTIDEYRKYIEKDGALE 185 Query: 331 RRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKA 390 RR QK+ V EP+ ++ + I+RGL+ER+E H V+I D A+VAA +S RYI+DR LPDKA Sbjct: 186 RRMQKILVDEPTKQEALTIMRGLRERWEAFHKVRIFDDALVAAVEMSARYISDRYLPDKA 245 Query: 391 IDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK----RLDMLNE 446 IDLIDEAA+ I+ I S P ELD + ++II L E AL +E E R++ L + Sbjct: 246 IDLIDEAAAKIKTLIHSLPPELDNIKQKIIHLSTELAALEREKKENHSNVRLGRIEQLKK 305 Query: 447 ELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKI 506 E+ D + +EL +W +K +K E+ IE+ + G+ + S+L Y +I Sbjct: 306 EIKDFTNKQNELTVKWTQQKTIYECINKLKEEVTNLTAEIERLQAKGEYTQASKLLYLEI 365 Query: 507 PELEKQLEAAT-QLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQE 565 P+ ++++E T +L T L++ ++ EIAEV+++ T IP+S+++ SE++KLL ++ + Sbjct: 366 PKRQEEIEKKTKELSEFTDNLIKTSISRVEIAEVISQATKIPLSKLVASEQQKLLNLKND 425 Query: 566 LHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDS 625 L + GQ+ A+ VS+A+ R RA + DPNRPIGSFLFLGPTGVGKTE+ K LA +FD+ Sbjct: 426 LSKYIKGQDHAIKNVSDAVLRGRAQINDPNRPIGSFLFLGPTGVGKTEVAKKLAYCLFDN 485 Query: 626 DEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPD 685 ++AMVRIDMSEFME+HSV +L+G+PPGY+GY++ G L++A+R +PY+V+L DE+EKAHPD Sbjct: 486 EKAMVRIDMSEFMERHSVDKLIGSPPGYIGYDQPGVLSDAIRTKPYAVVLFDEIEKAHPD 545 Query: 686 VFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVV 745 V NILLQ+LDDG+LTD R V+F+NT++IMTSN+G++ I A+ + + Sbjct: 546 VLNILLQILDDGQLTDNHNRLVNFKNTIIIMTSNIGAEHI--------LANNPAKTIEEL 597 Query: 746 SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSE 805 RPE +NRIDE++ F L ++ +++IAQ L L R++++ I + ++ + + Sbjct: 598 KRKIRPELLNRIDELITFKALNDKDLSAIAQKLLSDLSDRIKKQQINITFDKKIVENVVK 657 Query: 806 NGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNED 851 +G + V+GARPLKR IQ+++EN LA++I+ +L K N + Sbjct: 658 HGSNTVFGARPLKRYIQREVENFLAKKIIENKLEKNKSYVCTFNAE 703 >UniRef50_A6FZR3 ATP-dependent chaperone protein ClpB n=3 Tax=Proteobacteria RepID=A6FZR3_9DELT Length = 921 Score = 713 bits (1839), Expect = 0.0, Method: Composition-based stats. Identities = 340/896 (37%), Positives = 489/896 (54%), Gaps = 63/896 (7%) Query: 5 RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDI 64 RL+ L A A I P HL+ ++ QE G + +L G + +L I Sbjct: 11 RLSPVSTGMLEAAVGRAAQGQFYEIVPEHLLYGIVGQEDGDAAQILKHFGQDRLRLVGRI 70 Query: 65 NQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKR-GDNFISSELFVLAALE--SRGT 121 + L + G S+ L + + L+ G + + +L E SR T Sbjct: 71 EKVLESMKT--GNAKRPVFSEALFQWIEDAWTLSSLLYGVATLRTGHLLLQFCERASRYT 128 Query: 122 LADILKAAGATTANITQAIEQMRGGESV--------------------NDQGAEDQRQAL 161 D + T + + + + + GA AL Sbjct: 129 AEDFPELEAIDTEVLRREFSSVVFNSNELDDVASSGGGGARSGRGAAPGEAGAPSADSAL 188 Query: 162 KKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQ 221 ++T+ LT+ A G++DP+ GR EIR+ + +L RR KNNP+++GEPGVGKTA+VEGLA Sbjct: 189 GQFTVSLTQEARDGRIDPIFGRHREIRQIVDILARRRKNNPIIVGEPGVGKTALVEGLAL 248 Query: 222 RIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELH 281 +I++G+VP+ LK ++ALDMG L AGA +GEFE+RLK V++++ +ILFIDE H Sbjct: 249 QIVSGDVPDLLKNVELIALDMGLLQAGASVKGEFEKRLKAVISEVKASPTPIILFIDEAH 308 Query: 282 TMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEP 341 T++GAG G DA N+LKPALARGEL V ATT EY++Y EKD ALERRFQ V EP Sbjct: 309 TLIGAGANKGGSDASNLLKPALARGELRTVAATTWSEYKKYFEKDPALERRFQPVKCDEP 368 Query: 342 SVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSI 401 SVED + +LRGL +YE H V I D A+VAAA LS RYI+ RQLPDKA+DL+D AA+ + Sbjct: 369 SVEDAVVMLRGLAGKYEEAHGVTIRDEAVVAAAELSGRYISGRQLPDKAVDLLDTAAARV 428 Query: 402 RMQIDSKPEELDRLDRRIIQLKLEQQALMK---ESDEASKKRLDMLNEELSDKERQYSEL 458 +++ +KP+ ++ L+ + L ++ AL + E E + L E+ ++ Sbjct: 429 KIEQGAKPQRIEELELELASLDRKRAALDRDIAEHIEVDQDAYAELLGEIESLRESVAKG 488 Query: 459 EEEWKAEKASLSGTQ---TIKAELEQAKIAIEQARRVGDLARMSELQY------------ 503 + W AE+ ++ + E E A+IA +A G+ + + Sbjct: 489 TQRWVAERDAVKAYNAACEVLREAEAAEIAKLEAPAEGEGEAQAPAEPPLVDAPAEGEGE 548 Query: 504 GKIPELEKQLEAA-----------TQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMM 552 G+ K +E + G+ L+ ++ +A+V+A WTGIPV +M Sbjct: 549 GEARAPAKSIEELRAEVEAARAAIDAIRGEEDPLVHHECDADVVAKVVANWTGIPVGKMK 608 Query: 553 ESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKT 612 +L +E L RV GQ AV VS +R + AG+ DPN PIG LF+G +GVGKT Sbjct: 609 ADTIGSVLALEDVLGSRVKGQEPAVRVVSETVRMAYAGVRDPNTPIGVLLFVGTSGVGKT 668 Query: 613 ELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYS 672 E+ +LA+ ++ D M I+MSEF EKH+VSRL+G+PPGYVGY EGG LTEAVR+RPYS Sbjct: 669 EMALSLADQLYGGDRFMTTINMSEFQEKHTVSRLIGSPPGYVGYGEGGMLTEAVRQRPYS 728 Query: 673 VILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGEL 732 V+LLDE EKA PDV N+ QV D G L DG+GRTVDFRNT++I+TSNL SD I + Sbjct: 729 VVLLDECEKADPDVMNLFYQVFDKGVLNDGEGRTVDFRNTIIILTSNLASDTIMRLYQGD 788 Query: 733 D---YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEE- 788 + + E + VS +F+P + R+ +V F P+G + + IA ++L++L +RL E Sbjct: 789 EAPATEEVVEAIRPTVSAHFKPALLARMT-MVPFRPIGPEIMREIAILKLRKLERRLRET 847 Query: 789 RGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQIL----SGELVP 840 E SDE L L D GAR + ++ + LA+ +L GE+ P Sbjct: 848 HEIETTFSDELLDELVRRCTDADTGARNVDHTLRASLMPALARTLLEYMADGEIPP 903 >UniRef50_Q46HG6 ATPase n=17 Tax=Cyanobacteria RepID=Q46HG6_PROMT Length = 931 Score = 712 bits (1838), Expect = 0.0, Method: Composition-based stats. Identities = 377/912 (41%), Positives = 560/912 (61%), Gaps = 71/912 (7%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 D +++ L A+ A ++ ++ HL+ L + S IN +L Sbjct: 18 EPDSFSDEAWSLLLIAEQSARRWRHKNLDVEHLIEVLFRNKK--YQKYTNSLPINHKELN 75 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGT 121 + + LP D+ +DL +L + D + G N I ++A Sbjct: 76 EILENFIAELP--INNQPDLFIGEDLEILLEVADDFRSRWGSNQIEISHILIAIGRDNRL 133 Query: 122 LADILKAAGATTANITQAIEQMRGGESVNDQGAEDQR----------------------- 158 D+L AG + + + ++ +S + Sbjct: 134 GEDLLYQAGLPSEILEAELRRLPAPKSFKQSKRNQDKPITNRPQKDSQSFMPTETTAKDP 193 Query: 159 --------------------------QALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQ 192 AL Y DLT AE G LDPVIGR+ EI+ + Sbjct: 194 KPEPLPPLSKEEITSKQEPLNLNEAPSALDLYCKDLTTEAENGTLDPVIGRESEIKAITK 253 Query: 193 VLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYR 252 VL RR KNNPVLIG PGVGKTAI E LAQ+I++ E+PE L+G R+++LD+GAL+AGAK+R Sbjct: 254 VLSRRGKNNPVLIGAPGVGKTAIAELLAQKIVDNELPESLQGLRLISLDIGALIAGAKFR 313 Query: 253 GEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVG 312 G+FEER + +L+++ E VILFIDELHT+V +++ DAG++LKP LA G+L C+G Sbjct: 314 GQFEERFRSLLSEINNSEKGVILFIDELHTIVSKDRSNT--DAGSLLKPLLASGDLRCIG 371 Query: 313 ATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVA 372 ATT D YR+ IEKD AL RRFQ+V + EPS++ ++ IL+GLKE YE+HH V ITD A++ Sbjct: 372 ATTPDNYRRTIEKDLALNRRFQQVSIKEPSLDLSLEILKGLKENYEVHHGVIITDEALIT 431 Query: 373 AATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKE 432 A L++RYI+DR LPDKAIDLIDEA++ +R++ KP+ ++ + ++ L+ +++ Sbjct: 432 ANRLAYRYISDRCLPDKAIDLIDEASAQVRIESALKPKIIEEKESQVNHLE---SSIINA 488 Query: 433 SDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRV 492 + + + ++ L E+ + +E++++W+ + + Q +K L++ K I + Sbjct: 489 DKDTTLETINNLQEKKELLLFELAEIKQKWQDQIDKSAELQELKISLKELKNLIREVEIS 548 Query: 493 GDLARMSELQYGKIPELEKQLEAAT----QLEGKTMRLLRNKVTDAEIAEVLARWTGIPV 548 GD+ + L+Y ++ +L++++E + LL++KV +IA+V++RWTGIPV Sbjct: 549 GDMEEVERLKYDQLYQLQERIEEIEVSIREDNEYGNSLLKDKVNPEDIADVVSRWTGIPV 608 Query: 549 SRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTG 608 +++ ER+KLL++EQ+L +VIGQ AV AVS AIRR+RAG+ D RPIGSFLFLGPTG Sbjct: 609 RKVVSGERQKLLKLEQDLGKKVIGQLNAVQAVSAAIRRARAGMQDIKRPIGSFLFLGPTG 668 Query: 609 VGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRR 668 VGKTEL K+LA+ +FD ++A++R+DMSE+ME+++VSRL+GAPPGYVGYEEGG LTEA+R+ Sbjct: 669 VGKTELAKSLASSLFDEEDALLRLDMSEYMERNAVSRLLGAPPGYVGYEEGGQLTEAIRK 728 Query: 669 RPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQER 728 RPY+V+LLDE+EKAH +VFNILLQVLDDGRLTD QGRTVDFRNTV++MTSNL S I Sbjct: 729 RPYAVLLLDEIEKAHQEVFNILLQVLDDGRLTDSQGRTVDFRNTVIVMTSNLASKAILNN 788 Query: 729 FGELDYA---------HMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQL 779 +L + + + ++ +FRPEF+NRIDEV+ F+PL + I ++QL Sbjct: 789 SLQLQSENSNKNILLQELDQKINEALTKHFRPEFLNRIDEVIKFNPLKPDSLEQIVRLQL 848 Query: 780 KRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELV 839 L K L+ +G ++++ + +K+L+E GY+P YGARPL+R I++++ENPLA QIL Sbjct: 849 DELKKLLKHQGLDLYVDENTIKILAEEGYEPEYGARPLRRVIRRRLENPLATQILEEAFQ 908 Query: 840 PGKVIRLEVNED 851 K IR+E +D Sbjct: 909 GAKSIRVETKDD 920 >UniRef50_Q21KI1 ATPase AAA-2 n=7 Tax=Gammaproteobacteria RepID=Q21KI1_SACD2 Length = 897 Score = 711 bits (1834), Expect = 0.0, Method: Composition-based stats. Identities = 318/880 (36%), Positives = 508/880 (57%), Gaps = 36/880 (4%) Query: 1 MRLDRL----TNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGIN 56 M ++L +N+ + + +LA + +I+ H ++ L +E + +L ++ Sbjct: 12 MEFEKLVKNLSNESKELFEKSIALASSRSHFYIDVEHWLTEALAEEQREIIAILKHFNVD 71 Query: 57 AGQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNF-ISSELFVLAA 115 ++ D++ AL G G + S D+VR+L +A + + + +LA Sbjct: 72 VDRVHADLDLALEN--TKTGNDGFPKISPDIVRLLFEAWMIASSQYASVQVLPVHILLAL 129 Query: 116 LESRGTLADILKAAG----ATTANITQAIEQMRGGESVNDQGAEDQR-----QALKKYTI 166 ++S G I K + + I E + GE++ DQG + +L ++T Sbjct: 130 VDSAGLKTKIGKISKQFEAISGEEIRTQCETLLRGEALQDQGEATNKKLTKTPSLDQFTT 189 Query: 167 DLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIING 226 +LT++A+ GK+D ++GRD+EIR+ I VL RR +NNP+L GE GVGKTA+VEGLA +I G Sbjct: 190 NLTQQAKDGKIDSILGRDDEIRQIIDVLCRRKQNNPILTGEAGVGKTAVVEGLAVKIAQG 249 Query: 227 EVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGA 286 +VP ++ + +LD+G L AGA +GEFE RLK V+ ++ + ++ILFIDE HT++GA Sbjct: 250 DVPTAIENVEIRSLDLGLLQAGAGVKGEFENRLKNVIKEVQQSVQSIILFIDEAHTLIGA 309 Query: 287 GKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDT 346 G G+ DA N+LKPALARGEL + ATT EY++Y E DAAL RRFQ V V EPSV+ Sbjct: 310 GNQAGSGDAANLLKPALARGELRTIAATTWAEYKKYFESDAALTRRFQVVKVEEPSVDKA 369 Query: 347 IAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQID 406 I +LR E HH V I D A+ A+ LSHRYI RQLPDK + L+D A + + + + Sbjct: 370 IIMLRNAAPTLEQHHKVVILDAAVSASVNLSHRYIPGRQLPDKCVSLLDTACARVNLSQN 429 Query: 407 SKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSD--KERQYSELEEEWKA 464 + P + + + I ++ E + L +E+++ + ++ E+ +Y L W+ Sbjct: 430 TTPARIVQYSQEIKNIEFEIERLNQEAEKGYEHSASIVELEVKKVGITERYQSLCARWEQ 489 Query: 465 EKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTM 524 EK ++ + + + E E+ + + ++L I EL +L++ + + Sbjct: 490 EKQIINQINSAREKAE------EKVQDSDNEESATDLTNTLIAELRVKLKSIS----GSQ 539 Query: 525 RLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAI 584 L+ V + +AEV+A WTGIPV RM E + +L +EQ + RVIGQ+ + +S A+ Sbjct: 540 PLIYECVDEQVVAEVVADWTGIPVGRMQSDEIQNVLSLEQTMEKRVIGQSHGLKLISKAV 599 Query: 585 RRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVS 644 + +RA L+DP RP+G F+ +GP+GVGKTE LA ++ S++ M I+MSEF E+H VS Sbjct: 600 QTARAKLSDPKRPLGVFMLVGPSGVGKTETALTLAEQLYGSEQNMTVINMSEFKEEHKVS 659 Query: 645 RLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQG 704 L+G+PPGYVGY EGG LTEAVRR+PYSV+LLDE+EKAHP V +I QV D G L DG+G Sbjct: 660 MLMGSPPGYVGYGEGGVLTEAVRRKPYSVVLLDEMEKAHPGVQDIFYQVFDKGILRDGEG 719 Query: 705 RTVDFRNTVVIMTSNLGSDLIQERF----GELDYAHMKELVLGVVSHNFRPEFINRIDEV 760 R +DF+NTV+IMTSN S I++ + + + E + G + ++P F+ RI+ + Sbjct: 720 RDIDFKNTVIIMTSNTASAQIEQLCIDPETKPEPKALLEAIEGTLRETYKPAFLGRIN-L 778 Query: 761 VVFHPLGEQHIASIAQIQLKRLYKRLE-ERGYEIHISDEALKLLSENGYDPVYGARPLKR 819 + ++PL EQ ++ IA +QL + +R+E E++ SD+ ++ + GAR + Sbjct: 779 IPYYPLDEQCLSEIAVMQLHAIQQRVETNYKVELNYSDKLVEHVVSLCAQSDTGARKISA 838 Query: 820 AIQQQIENPLAQQILSGEL--VPGKVIRLEVNEDRIVAVQ 857 + + LA++IL+ + + ++V+E+ V+ Sbjct: 839 LLNNTLLPVLAEKILTEIALDKALESVEVDVSEEGEFVVK 878 >UniRef50_Q2SEG4 ATPase with chaperone activity, ATP-binding subunit n=63 Tax=Bacteria RepID=Q2SEG4_HAHCH Length = 919 Score = 710 bits (1833), Expect = 0.0, Method: Composition-based stats. Identities = 317/866 (36%), Positives = 489/866 (56%), Gaps = 29/866 (3%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 ++ T+ + +L D LA + +E H++ +L Q + +L G++ G++ Sbjct: 10 IEPTTSVVRKSLEDGLRLAQQERHSSLEIEHVLLKVLEQSDSDLDRVLEQLGVDIGKVSR 69 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQ-KRGDNFISSELFVLAALESRGT 121 +++Q + + + V S +V L LA + G NFISS A + Sbjct: 70 ELSQTVGKF-HRDNPRDMVPFSPLVVDALKAGWLLASVEMGVNFISSAHLFAAVMSHNTM 128 Query: 122 LADILKAAGATTANITQAIEQMRGGESVNDQGAED----------------QRQALKKYT 165 +L + + + + + Q AL+KYT Sbjct: 129 RNQLLSSVKTLQEISLEKVLPAVKAVTGQSSESRAYLKAAAGGGAPAAPTAQGGALQKYT 188 Query: 166 IDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIIN 225 ++LTERA ++DPV+GRD EIR+ I +L RR +NNP+L GE GVGKTA+VEGLA RI Sbjct: 189 VNLTERALNNEIDPVLGRDPEIRQCIDILTRRRQNNPILTGEAGVGKTAVVEGLALRIAQ 248 Query: 226 GEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVG 285 +VPE L+G + LD+G L AGA +GEFE+RLK V+ ++ +I+FIDE HTM+G Sbjct: 249 KDVPEPLQGVHIHVLDLGLLQAGASMKGEFEQRLKSVIEEVKASPAPIIMFIDEAHTMIG 308 Query: 286 AGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVED 345 AG +G DA N+LKPALARGEL + ATT EY++Y E+D AL RRFQ V V EP+ Sbjct: 309 AGGKEGQGDAANLLKPALARGELRTIAATTWAEYKKYFERDPALTRRFQVVKVEEPTEAV 368 Query: 346 TIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQI 405 I +LRG+ + +HH+V+I+D AI+ A LS RYI RQLPDK + L+D A + + + Sbjct: 369 AIDMLRGISKILAIHHNVRISDDAIIQAVKLSARYIPGRQLPDKGVSLLDTACARVSLSQ 428 Query: 406 DSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRL--DMLNEELSDKERQYSELEEEWK 463 + P ++ RRI Q+ + +E+ + + ++L EE + E + E+W+ Sbjct: 429 SATPSLIEDTRRRIQQIDTNLDLISQENISSGEYHETLELLTEEKAVLEASLAAQTEQWE 488 Query: 464 AEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKT 523 EK ++ ++ +LEQ A + GD R+S+ + ++ K L AA Sbjct: 489 KEKDLIAKILEVRTKLEQDYQAKKGPEDAGD--RLSDEEVAELQVEFKNLFAALASAQGD 546 Query: 524 MRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNA 583 L+ V +AEV+A WTGIPV +M+ E +L + ++L RVIGQ+ A++A++ A Sbjct: 547 QPLMMPHVDGQAVAEVVANWTGIPVGKMVSDEINGILNLHEQLEKRVIGQSHALEAIAQA 606 Query: 584 IRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSV 643 IR SRAGL DP +PIG FL +GP+GVGKTE ALA+ +F ++ + I+M+EF E+H V Sbjct: 607 IRTSRAGLTDPRKPIGVFLMVGPSGVGKTETALALADTLFGGEQNLTVINMAEFKEEHKV 666 Query: 644 SRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQ 703 S L+G+PPGYVGY EGG LTEA RR+PYSVILLDE+EKAH V ++ + D G + DG+ Sbjct: 667 SMLLGSPPGYVGYGEGGVLTEAARRKPYSVILLDEMEKAHQGVQDVFYNLFDKGSIKDGE 726 Query: 704 GRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSH----NFRPEFINRIDE 759 GR +DF+NTV+IMTSN G + I+ + + +++L + H F+P F+ R + Sbjct: 727 GRDIDFKNTVIIMTSNAGEEAIRAICAQSEEKPEPDVMLDSMRHELLKYFKPAFLGRAN- 785 Query: 760 VVVFHPLGEQHIASIAQIQLKRLYKRLEER-GYEIHISDEALKLLSENGYDPVYGARPLK 818 V+ ++PL ++++ I +I + R+ +R+ G ++ L + + GAR ++ Sbjct: 786 VITYYPLDDENLFKICRINMDRIARRVRNHYGAAFTYDEDVLLNIVARSQEVDTGARNIE 845 Query: 819 RAIQQQIENPLAQQILSGELVPGKVI 844 + + + L+ + LS L G+ I Sbjct: 846 HILNRTVLPELSTECLS-RLANGEHI 870 >UniRef50_Q9I742 Protein clpV1 n=17 Tax=Proteobacteria RepID=CLPV1_PSEAE Length = 902 Score = 710 bits (1832), Expect = 0.0, Method: Composition-based stats. Identities = 319/889 (35%), Positives = 491/889 (55%), Gaps = 42/889 (4%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +L + A+ A N ++E +H +L + ++ +GI+ +L Sbjct: 10 FGKLNSLAYKAIEAATVFCKLRGNPYVELVHWFHQILQLPDSDLHQIVRQSGIDPARLAK 69 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKR-GDNFISSELFVLAALES--- 118 D+ +AL+RLP+ + D+ S + + G++ + + V+ L++ Sbjct: 70 DLTEALDRLPRGSTSITDL--SSHVEEAVERGWVYGSLMFGESQVRTGYLVIGILKTPSL 127 Query: 119 ----------------RGTLADILKAAGATTANITQAIEQMRGGESVND------QGAED 156 + GA+ N A + G + + A Sbjct: 128 RHALTGLSAEFAKLKVEALTERFDEYVGASPENGLSASDGFNAGAAPGEASGALAPSAMG 187 Query: 157 QRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIV 216 +++ALK++T+DLTE+A GKLDP++GRDEEIR+ + +L RR +NNP+L GE GVGKTA+V Sbjct: 188 KQEALKRFTVDLTEQARSGKLDPIVGRDEEIRQLVDILMRRRQNNPILTGEAGVGKTAVV 247 Query: 217 EGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILF 276 EG A RI+ G+VP LK + ALD+G L AGA +GEFE+RL+ V+ D+ E +ILF Sbjct: 248 EGFALRIVAGDVPPALKDVELRALDVGLLQAGASMKGEFEQRLRQVIEDVQSSEKPIILF 307 Query: 277 IDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKV 336 IDE HT+VGAG A G DA N+LKPALARG L V ATT EY+++IEKD AL RRFQ V Sbjct: 308 IDEAHTLVGAGGAAGTGDAANLLKPALARGTLRTVAATTWAEYKKHIEKDPALTRRFQVV 367 Query: 337 FVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDE 396 V EPS I ++RG+ E HH VQI D A+ AA LSHRYI RQLPDK++ L+D Sbjct: 368 QVDEPSEHKAILMMRGVASTMEKHHQVQILDEALEAAVRLSHRYIPARQLPDKSVSLLDT 427 Query: 397 AASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDE--ASKKRLDMLNEELSDKERQ 454 A + + + + P E+D RRI L+ E + +ES A+ +R L+++ + Sbjct: 428 ACARTAISLHAVPAEVDDSRRRIEALETELAIIRRESAIGVATAERQRNAETLLAEERER 487 Query: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQ---ARRVGDLARMSELQYGKIPELEK 511 + LE+ W EK + +A L A A++ G++ R+ E Q + Sbjct: 488 LAALEQRWAEEKRLVDELLETRARLRAAAEAVDAGGVPLGEGEV-RLDEEQRQALHARLA 546 Query: 512 QLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVI 571 +L+A L+ V +A V+A WTGIPV RM +E E +L +++ L R+I Sbjct: 547 ELQAQLSALQGEEPLILPTVDYQAVASVVADWTGIPVGRMARNEIETVLNLDRHLKKRII 606 Query: 572 GQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVR 631 GQ+ A++ ++ I+ SRAGL +P++PIG F+ G +GVGKTE ALA M+ ++ ++ Sbjct: 607 GQDHALEMIAKRIQTSRAGLDNPSKPIGVFMLAGTSGVGKTETALALAEAMYGGEQNVIT 666 Query: 632 IDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILL 691 I+MSEF E H+VS L GAPPGY+GY EGG LTEAVRR+PYSV+LLDEVEKAHPDV I Sbjct: 667 INMSEFQEAHTVSTLKGAPPGYIGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVHEIFF 726 Query: 692 QVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVS----H 747 QV D G + DG+GR +DF+NT++++T+N G+++I + + E + + Sbjct: 727 QVFDKGVMEDGEGRVIDFKNTLILLTTNAGTEMIASLCADPELMPEPEAIAKSLREPLLK 786 Query: 748 NFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEE-RGYEIHISDEALKLLSEN 806 F P + R+ + ++PL + + +I+++QL R+ KR+E + + L+ Sbjct: 787 IFPPALLGRL-VTIPYYPLSDDMLKAISRLQLGRIKKRVEATHKVPFEFDEGVVDLIVSR 845 Query: 807 GYDPVYGARPLKRAIQQQIENPLAQQILSGEL--VPGKVIRLEVNEDRI 853 + G R + + + ++++ L+ L P +R+ +++ Sbjct: 846 CTETESGGRMIDAILTNTLLPDMSREFLTRMLEGKPLAGVRISSRDNQF 894 >UniRef50_Q8EW28 Chaperone protein clpB n=2 Tax=Bacteria RepID=CLPB_MYCPE Length = 705 Score = 709 bits (1831), Expect = 0.0, Method: Composition-based stats. Identities = 322/705 (45%), Positives = 492/705 (69%), Gaps = 13/705 (1%) Query: 156 DQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAI 215 +++ LKKY+ +L E KL+ +IGR++EIRR I++L R+ KNNPVLIGEPGVGKTAI Sbjct: 9 NEKDILKKYSRNLNEEVSANKLNKIIGREQEIRRVIEILSRKEKNNPVLIGEPGVGKTAI 68 Query: 216 VEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVIL 275 VEG Q+II+ EVPE L V +++ +L+AG +GEFE+RL ++ + + G VIL Sbjct: 69 VEGFVQKIISKEVPENLVHCVVYEVNLSSLIAGTFLQGEFEKRLNALIKEAKQNNGAVIL 128 Query: 276 FIDELHTMVGAGKA--DGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRF 333 FIDE+H ++G GKA + MDA N+LKP +ARGE+ +GATT +EYRQYIEKD ALERRF Sbjct: 129 FIDEIHQLMGMGKAGNNSGMDAANILKPIMARGEIKIIGATTSNEYRQYIEKDGALERRF 188 Query: 334 QKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDL 393 QK+ V EP+ E+ + I+RGLKE++E++H V+I D A+VA+ LS RYI+D+ LPDKAIDL Sbjct: 189 QKILVEEPTPEEALTIMRGLKEKWEIYHKVRIQDNALVASVKLSERYISDKYLPDKAIDL 248 Query: 394 IDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKER 453 IDEAA+ I+ + + P E ++++I L+ E+ AL KE K+R++ + EL ++ Sbjct: 249 IDEAAAKIKTEAHTSPSEP--INKKIFYLETEKIALSKEEGTNQKERINEIEIELEKLKQ 306 Query: 454 QYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQL 513 + +E+EWK +K IK E+E+ +E+ + G+ S++ Y +PEL+K+L Sbjct: 307 ERDLVEKEWKEQKEQQVALNKIKKEIEKNNWDVERYQNQGEYTEASKILYSVLPELKKKL 366 Query: 514 EAATQLEGKTMR-LLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIG 572 EA + + + L+++ +++ ++AE+++R T IP++++ E E++KLL + L RV G Sbjct: 367 EAIEKSISENKKVLIKDYISEIDVAEIISRITKIPLNKIFEKEQDKLLNLFNNLKKRVKG 426 Query: 573 QNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRI 632 Q+EA+ VS+ + ++R G+ +PNRPIGSFLF+GPTGVGKTE+ K+LA +F++++A+VRI Sbjct: 427 QDEALKLVSDTVLKNRVGINNPNRPIGSFLFVGPTGVGKTEVAKSLAENLFNTEKAIVRI 486 Query: 633 DMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQ 692 +MSE+MEKHS+SRL+GAPPGY+GYE+ G L+E +RR+PYSV+LLDE+EKAHPD+ N+LLQ Sbjct: 487 NMSEYMEKHSISRLIGAPPGYIGYEQAGELSEQIRRKPYSVVLLDEIEKAHPDILNVLLQ 546 Query: 693 VLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPE 752 VLD+G L D QGR ++F+NT++IMTSN+G+ + E ++ + +F+PE Sbjct: 547 VLDEGTLKDNQGRNINFKNTIIIMTSNVGALYLMENKEDM--------FERELKTSFKPE 598 Query: 753 FINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVY 812 F+NRIDE++ F+ + + IAQ L L KRL++ Y+I ++ +++NGY Y Sbjct: 599 FLNRIDEIIKFNSITMEFAKEIAQKMLDDLEKRLKDNNYQITFDKSVVEYVAKNGYSKEY 658 Query: 813 GARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857 GARP+ R IQ+ IEN + + IL EL+ + + +++ ++ Sbjct: 659 GARPINRFIQKTIENFITESILKNELIKDRSTIINFANNKLAILK 703 >UniRef50_A4FF35 Clp protease ATP binding subunit n=7 Tax=Bacteria RepID=A4FF35_SACEN Length = 838 Score = 708 bits (1828), Expect = 0.0, Method: Composition-based stats. Identities = 371/864 (42%), Positives = 504/864 (58%), Gaps = 86/864 (9%) Query: 4 DRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTD 63 + +T K Q LA A A G + ++ LH++ A + +L ++ Sbjct: 39 ELMTQKTQELLAGAADYARGLGHDDLDALHVLWAATKEATT--REMLEGVQVDPDTFAET 96 Query: 64 INQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLA 123 + + L + + P+ +VL ++A+ G +I E +LA S + A Sbjct: 97 VQRQLPAAREAASRAPALTPAGR--KVLVDAYQVARALGSTYIGPEHVLLAMSASPDSEA 154 Query: 124 -DILKAAGATTANITQAIEQMRGGESVNDQGAEDQ---RQALKKYTIDLTERAEQGKLDP 179 +L +AGAT + R E+ Q ++ L KY DLT RA G+LDP Sbjct: 155 GRLLASAGATPEEFRVSAGGARRSEAATGQATAERDSGTPTLDKYGQDLTARARDGELDP 214 Query: 180 VIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLA 239 V+GR +EI +TI+VL RRTKNNPVL+GE GVGKTAIVEG+AQRI +G+VP L G+R++ Sbjct: 215 VVGRADEIEQTIEVLSRRTKNNPVLVGEAGVGKTAIVEGIAQRIADGQVPHVLTGKRIVQ 274 Query: 240 LDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNML 299 LD+ +++AG +YRG+FEER+ V+++++ G VI+FIDELHT+VGAG A+GA+DAGNML Sbjct: 275 LDLSSMLAGTRYRGDFEERMTKVIDEISANSGEVIVFIDELHTLVGAGGAEGAVDAGNML 334 Query: 300 KPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYEL 359 KP LARGELH VGATTLDEYR+ IEKDAALERRFQ V V EPSVEDTI +L L++RY Sbjct: 335 KPRLARGELHVVGATTLDEYRKNIEKDAALERRFQPVQVPEPSVEDTIEVLDRLRDRYAE 394 Query: 360 HHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRI 419 HH V+ TD A+ AAA LS RYIADR LPDKAIDL+D+A + R+ + D L++RI Sbjct: 395 HHRVRYTDEAVAAAARLSDRYIADRFLPDKAIDLLDQAGARKRLSVVGPS--ADELEQRI 452 Query: 420 IQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAEL 479 +L+ E+ S +E+++ A +AEL Sbjct: 453 QRLEREKD---------------------------RSVADEDYERASALRDEIGVAQAEL 485 Query: 480 EQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEV 539 E + A D+A + G +P + T+L L R + + Sbjct: 486 EANRDAGVPEVTESDIAEVVSRATG-VPVSRLTEQERTRLRNLEGELHRRVIGQDDAVRA 544 Query: 540 LARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIG 599 LAR A+RRSR+G+ + NRP+G Sbjct: 545 LAR----------------------------------------AVRRSRSGVGNANRPVG 564 Query: 600 SFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEG 659 SFLFLGPTGVGKTEL KALA +F ++ M+R+DMSEF E+H+ +RL+GAPPGYVGY E Sbjct: 565 SFLFLGPTGVGKTELAKALAETLFGDEDRMIRLDMSEFQERHNAARLIGAPPGYVGYGEA 624 Query: 660 GYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSN 719 G LTEAVRRRPYSV+LLDEVEKAHPDVFN LLQVL+DGRLTDGQGRTVDF NTVVIMTSN Sbjct: 625 GELTEAVRRRPYSVVLLDEVEKAHPDVFNTLLQVLEDGRLTDGQGRTVDFTNTVVIMTSN 684 Query: 720 LGSDLIQERFGELDY--------AHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHI 771 LGS++I + G L + + + ++ + FRPEF+NRIDEVVVF L + + Sbjct: 685 LGSEVISSKSGGLGFSAAQDEADESLHDRLMPRLKEAFRPEFLNRIDEVVVFRKLTAEQL 744 Query: 772 ASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQ 831 IA + L KRL I D A+ L++E G+ P +GARPL+R I++ +++ +A Sbjct: 745 HDIADLLLDGTRKRLAAMEIGIGFDDAAVDLIAERGHQPEFGARPLRRTIERDVDDRIAD 804 Query: 832 QILSGELVPGKVIRLEVNEDRIVA 855 +L GEL G + + V + ++ Sbjct: 805 LVLDGELEAGSAVHVGVRDGQLTF 828 >UniRef50_B5ZBN7 Chaperone protein ClpB n=44 Tax=cellular organisms RepID=B5ZBN7_UREU1 Length = 704 Score = 706 bits (1822), Expect = 0.0, Method: Composition-based stats. Identities = 328/699 (46%), Positives = 479/699 (68%), Gaps = 11/699 (1%) Query: 154 AEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKT 213 ++ L+++ +L + K+DP+IGRDEEIRRTI++L R+TKNNPVLIGEPGVGKT Sbjct: 5 QKNTSNPLEEFGRNLNQEILDNKIDPIIGRDEEIRRTIEILSRKTKNNPVLIGEPGVGKT 64 Query: 214 AIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNV 273 AIVEGLA RI++ +VP L + ++ L + +L+AGA Y+G+FEER+ +L ++ K GN+ Sbjct: 65 AIVEGLAYRIVHKDVPSNLLDKTIIELSLSSLIAGASYQGQFEERINAILKEVKKSNGNI 124 Query: 274 ILFIDELHTMVGAGKADGA-MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERR 332 ILFIDE+H +VG G+ G+ MD N+LKP +ARGE+ +GATTLDEYR YIEKD ALERR Sbjct: 125 ILFIDEIHQIVGMGRNQGSNMDVANILKPMMARGEIKLIGATTLDEYRLYIEKDQALERR 184 Query: 333 FQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAID 392 F KV V +P++++T+ I+RGLK R+E H ++I D A++AA LS RYI DR LPDKAID Sbjct: 185 FTKVLVNKPTIQETLTIMRGLKPRWEAFHGIKIHDNALIAAVNLSERYINDRNLPDKAID 244 Query: 393 LIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKE 452 LIDEAA+ I+ QI+S+P LD + R + L+ E+ AL E DE S KRL+ + E++ K+ Sbjct: 245 LIDEAAAKIKTQINSQPIYLDEIKRDLQHLQTEKAALESEKDEKSIKRLNDILEKIKLKQ 304 Query: 453 RQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQ 512 +++ L + + EK + + ++ ++E+ + IE + G + S L Y +P LEKQ Sbjct: 305 DEFNNLNDIYLKEKKQIDDLKNLRQKIERIQHDIEFYQSEGKYEKASRLLYSDLPALEKQ 364 Query: 513 LEAATQL--EGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRV 570 E + +++ + +T+ EIA+V+AR TGIP++ ++ E+ KLL + + + V Sbjct: 365 RGELENKINENSSQKMIVDSLTENEIADVIARATGIPLNHLLADEKTKLLSLNKRIAAHV 424 Query: 571 IGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMV 630 IGQ+EAV +S+A+ R RAG+ +PN+PIGSFLFLGPTGVGKTEL K LA +FDS +A++ Sbjct: 425 IGQDEAVKLISDAVIRGRAGINNPNQPIGSFLFLGPTGVGKTELAKTLAKELFDSQKALI 484 Query: 631 RIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNIL 690 R DMSE+MEKHSVS+LVGAPPGYVGYE G LTE+V+R+PYS++L DE+EKAHPDV NIL Sbjct: 485 RFDMSEYMEKHSVSKLVGAPPGYVGYENAGLLTESVKRKPYSILLFDEIEKAHPDVLNIL 544 Query: 691 LQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFR 750 LQ+LD+G + D + ++F+NT++IMTSN+G++ + E L + F+ Sbjct: 545 LQILDEGSVKDAKNNEINFKNTIIIMTSNVGAEALLENNK--------TNALMELQKTFK 596 Query: 751 PEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDP 810 PE +NRI E++ F+ L ++ I I++ LK L L ++ Y I +D K++ + Y Sbjct: 597 PEILNRISEIIFFNKLSKEVIFKISENLLKELSDLLAKQDYSIKFNDNIAKIMVDEAYSS 656 Query: 811 VYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVN 849 YGARPLKR I + +EN +A+ I+ + + + + Sbjct: 657 NYGARPLKRWITKHLENEIAKLIIENRITKNRNYEINYD 695 >UniRef50_B3L4X1 Heat shock protein 101, putative n=8 Tax=Plasmodium RepID=B3L4X1_PLAKH Length = 906 Score = 704 bits (1818), Expect = 0.0, Method: Composition-based stats. Identities = 315/865 (36%), Positives = 501/865 (57%), Gaps = 23/865 (2%) Query: 4 DRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTD 63 + N+ L +++A + + ++P+H++SAL + G S LL +NA L+ Sbjct: 35 ENYLNRTINILNAGKNIAKRYGHSQLKPVHILSALAKSDYG--SNLLKENSVNASNLKQY 92 Query: 64 INQALNRLPQVEG--TGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGT 121 ++ AL + + S + VL + LA K + E + + Sbjct: 93 LDTALEQTRAGPPLDNKSKIAYSDQVKEVLAEAEALANKYKSQKVDVEHLLSGLMNDE-L 151 Query: 122 LADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVI 181 + +IL T + + I + + ++ D+ + L+++ +L E+ GKL + Sbjct: 152 VNEILNEVYLTDEAV-KGILKSKLEKTKKDKDGKSGGLYLEQFGSNLNEKVRNGKLQGIY 210 Query: 182 GRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALD 241 GRDEEIR I+ L R KN+PVL+G+PG GKT IVEGL RI G+VP+ L+G V++L+ Sbjct: 211 GRDEEIRAVIESLLRYNKNSPVLVGQPGTGKTTIVEGLVYRIEKGDVPKELRGYTVISLN 270 Query: 242 MGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKP 301 +G YRGEFE R+K ++ +L ++ +ILF+DE+H ++GAGKA+G DA N+LKP Sbjct: 271 FRKFTSGTSYRGEFETRMKNIIKELKNKKNKIILFVDEIHLLLGAGKAEGGTDAANLLKP 330 Query: 302 ALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHH 361 L++GE+ +GATT+ EYR++IE +A ERRF+K+ V PSVE+TI ILR LK +YE + Sbjct: 331 VLSKGEIKLIGATTIAEYRKFIESCSAFERRFEKILVEPPSVENTIKILRSLKSKYESFY 390 Query: 362 HVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQ 421 + ITD A+VAAA +S R+I DR LPDKAIDL+++A S +++Q+ KP +D +R I + Sbjct: 391 GIHITDKALVAAAKVSDRFIKDRYLPDKAIDLLNKACSFLQVQLSGKPRIIDVTEREIER 450 Query: 422 LKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQ 481 L E L + D+ SK++ + L +E +K+ EE+ L + + L + Sbjct: 451 LAYEISTLEMDVDKVSKRKYNNLIKEFENKKDLLRTYYEEYVISGERLKRKKEAEKRLNE 510 Query: 482 AKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQ----LEGKTMRLLR-NKVTDAEI 536 K + Q + ELQ EK +E + +E KT + + V + Sbjct: 511 LK-ELAQNYISANKEPPIELQNSLKDAQEKYMEVYKETLAYVEAKTHNAMNVDAVYQEHV 569 Query: 537 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNR 596 + + R +G+P+ + + L++ L +IG + + ++S+A+ ++ G+ DP + Sbjct: 570 SYIYLRDSGMPLGSLSFESSKGALKLYNSLSKSIIGNEDIIKSLSDAVVKAATGMKDPEK 629 Query: 597 PIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGY 656 PIG+FLFLGPTGVGKTEL K LA +F S + ++R++MSEF E HSVS++ G+PPGYVG+ Sbjct: 630 PIGTFLFLGPTGVGKTELAKTLAIELFSSKDNLIRVNMSEFTEAHSVSKITGSPPGYVGF 689 Query: 657 EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 716 + G LTEAVR RP+SV+L DE+EKAHPDVF +LLQ+L DG + D R +DF NT++IM Sbjct: 690 SDSGQLTEAVRERPHSVVLFDELEKAHPDVFKVLLQILGDGYINDNHRRNIDFSNTIIIM 749 Query: 717 TSNLGSDLIQER-FGELDYAHMKELVL----------GVVSHNFRPEFINRIDEVVVFHP 765 TSNLG++L +++ F + + + E F+PEF+NRID++ +F P Sbjct: 750 TSNLGAELFKKKLFFDANNSDTPEYKRVFDDLRIQLIKKCKKVFKPEFVNRIDKIGIFEP 809 Query: 766 LGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQI 825 L ++++ I +++ K+L KRLEE+ + +S++A+ + + YDP GARP I+ I Sbjct: 810 LSKKNLREIVKLRFKKLEKRLEEKNIHVSVSEKAVDYIIDQSYDPELGARPTLIFIESVI 869 Query: 826 ENPLAQQILSGELVPGKVIRLEVNE 850 A L ELV + ++ N+ Sbjct: 870 MTKFAIMYLKKELVDDMDVHVDFNK 894 >UniRef50_D2KTB1 BC18 (Fragment) n=1 Tax=Babesia caballi RepID=D2KTB1_BABCB Length = 1037 Score = 703 bits (1815), Expect = 0.0, Method: Composition-based stats. Identities = 321/906 (35%), Positives = 480/906 (52%), Gaps = 51/906 (5%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 + + ++ L +Q A I H+ L+ + G + +L + + Sbjct: 93 LNFNNFSDNAVKVLMLSQEEARRAALNQIATKHIFQGLVCLDSGLAAQVLREFDVTVKKT 152 Query: 61 RTDINQALNRLPQVEGTGGD--VQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES 118 R A + + G+ + S D L L A+ G I +E +L L S Sbjct: 153 REAAETAASEPSDTKEASGERLMTFSPDAKEALELSSAEAEHMGHTTIETEHILLGVLGS 212 Query: 119 RGT-LADILKAAGATTANITQAIEQMRGGESVNDQGAEDQR------------------- 158 R +A +L+A + +A + + + Q Sbjct: 213 RSEGMAQLLEALSLNADVVRKATLKYIEEHKEHSEDRAQQETWKQTLSQYSYIPAQGRAV 272 Query: 159 ---------QALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPG 209 L +T+DLTE+AEQGKL V+ RD EI R I+ L RR K NP+LIGEPG Sbjct: 273 EVTKDAYAASPLGAFTVDLTEKAEQGKLQKVLCRDAEIDRAIRTLCRRHKRNPILIGEPG 332 Query: 210 VGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQ 269 VGKTA+VEGLA ++++G + L+ +RV LD+G +VAGA++RG+FEERL ++ ++ K Sbjct: 333 VGKTAVVEGLAMQLLDGAMVPSLRNKRVKQLDIGLMVAGARFRGQFEERLTKLIEEV-KA 391 Query: 270 EGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAAL 329 G+VIL IDE H +VGAG +GA+DA N+LKP+LARGE+ C+ TT EYR+Y EKD AL Sbjct: 392 MGDVILVIDEAHMLVGAGAGEGALDAANLLKPSLARGEIQCIAITTPREYRKYFEKDPAL 451 Query: 330 ERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDK 389 RRFQ ++V EPS EDT I+ E Y H V+ A+VAA S ++I DR LPDK Sbjct: 452 SRRFQPIYVNEPSDEDTKKIIAATTESYGRFHRVKYDPKAVVAALKYSKQFIQDRFLPDK 511 Query: 390 AIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELS 449 A+D++DEA S +M+ K R L+ E + + + + Sbjct: 512 ALDILDEAGSLAKMRFYEKSVSGHDYARNEGDLQANVGVACGEGTSGDVRMSVEIEVDEA 571 Query: 450 DKERQYSEL-EEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLAR-MSELQYGKIP 507 + E + + G +LE AK + S+ Sbjct: 572 KGSSVVNSPGNVENGSADGGMDGDVASGKDLEAAKSDEATNYAEYESDHDSSDFGSEDAY 631 Query: 508 ELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELH 567 + E E EG +V +AEV++ WTGIP+ ++ E E E + ME+E+H Sbjct: 632 DAETGSELEYGPEGTFSGDPLCEVGMEHVAEVVSTWTGIPLKKLSEDELEAMRNMEREIH 691 Query: 568 HRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDE 627 ++G EAV+ + AIRR+ A + DP+RPIGSFLF GP GVGK+E+ KAL F+F + E Sbjct: 692 KSIVGHEEAVEHICKAIRRATAKIKDPDRPIGSFLFCGPPGVGKSEIAKALTKFLF-AKE 750 Query: 628 AMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVF 687 ++++DMSE+ E HS+SR++G+PPGY G++ GG LTE +R+ PYSV++ DE+EKAH DV Sbjct: 751 NLIKLDMSEYNEPHSISRILGSPPGYKGHDAGGQLTEKLRKSPYSVVMFDEIEKAHRDVL 810 Query: 688 NILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERF----------------GE 731 N+LLQ+L+DG+LTD + + V F+N V+IMTSNLGS++I+ + Sbjct: 811 NLLLQILEDGKLTDSRNQVVSFKNAVIIMTSNLGSNVIERASRGVHAFGFNVEEKVTDPK 870 Query: 732 LDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGY 791 +Y +K LV + F+PE I+RID++++F PL EQ + IA + ++ KR E G+ Sbjct: 871 ENYTKIKALVCEELKSQFKPELIDRIDDIILFRPLEEQQLRQIAVLMIEETVKRARENGF 930 Query: 792 EIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNED 851 + D + + + D GARPL+R I +E+ LA+ +S E VPG+ R+ V Sbjct: 931 SVVADDAFVDYVLKLPRDEKGGARPLRRLITTSLEDKLAEFFISQEYVPGQRYRVTVEGT 990 Query: 852 RIVAVQ 857 +V + Sbjct: 991 NVVIRR 996 >UniRef50_Q1N528 ATPase with chaperone activity, ATP-binding subunit n=1 Tax=Bermanella marisrubri RepID=Q1N528_9GAMM Length = 859 Score = 702 bits (1811), Expect = 0.0, Method: Composition-based stats. Identities = 326/863 (37%), Positives = 476/863 (55%), Gaps = 51/863 (5%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGI-NAGQLR 61 +++LT +++L +A LA+ H N +E H ++LN L+ + LR Sbjct: 10 IEKLTPTLKMSLEEAAQLAMTHGNFNVEIEHWFISMLNHPHTDFLELIKKCQVIELDNLR 69 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGD-NFISSELFVLAALESRG 120 D+ +L G S+ L+ LN LA D I+S +AA+++ G Sbjct: 70 EDLAASLQYF--ESGNTRAPAFSRHLMECLNEAWLLASVDQDKEQITSAHIFIAAMKNSG 127 Query: 121 TLADILKAA----GATTANIT------------QAIEQMRGGESVNDQGAEDQRQALKKY 164 I G A++ AIE + ES + Q L KY Sbjct: 128 IAHQIRSIVPSLDGVNVADLEALSHTIIGKTSESAIESPQSSESTQSKQGNTQANYLSKY 187 Query: 165 TIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRII 224 +DLT +AE G++DPVIGRD+E+R+ + VL RR +NNP+L GEPGVGKTA+VEGLA RI+ Sbjct: 188 AVDLTAKAEAGEIDPVIGRDDEVRQLVDVLLRRRQNNPILTGEPGVGKTAVVEGLANRIV 247 Query: 225 NGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMV 284 +VP+ L+G R+L+LDM +L AGA +GEFE+RLK V+ ++ +I+FIDE HT++ Sbjct: 248 ANDVPQPLQGIRLLSLDMASLQAGASVKGEFEKRLKAVIEEVKTATVPIIVFIDEAHTII 307 Query: 285 GAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVE 344 GAG A+G DA N+LKPALARGE + ATT EY++Y EKD AL RRFQ V V EPS+E Sbjct: 308 GAGGAEGTGDAANLLKPALARGEFRTIAATTWSEYKKYFEKDPALTRRFQVVKVEEPSIE 367 Query: 345 DTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQ 404 I ++R L E HH+V I D AI A+ L+ RYI RQLPDK++ L+D A + + + Sbjct: 368 SAIDMMRSLASTLEQHHNVTILDEAIEASVKLAARYIPARQLPDKSVSLLDTACARVALS 427 Query: 405 IDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKA 464 + P ++ RRI Q + + L KES L+E++ E+Q E E E A Sbjct: 428 QGATPSAIEIEQRRIEQSQTNLRLLQKES-----HINSQLDEKIEFYEKQIREAESELVA 482 Query: 465 EKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTM 524 + L Q I ++++A+ E EL QL+A Sbjct: 483 LEDQLEKEQAIIGQIKEAREKGESQ-----------------DELADQLKAIQ----GES 521 Query: 525 RLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAI 584 L+ V +A ++ WTGIPV MM+ E LL +E EL RV+GQ+ A+ ++ A+ Sbjct: 522 PLVFLDVDKQAVAAIIESWTGIPVGNMMQDEINGLLSLEDELKKRVVGQDHAMQKIAQAV 581 Query: 585 RRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVS 644 R SR+GL DP +P+G F+ G +G GKTE ALA ++ ++ ++ I+MSEF E+H VS Sbjct: 582 RISRSGLTDPRKPVGVFMMAGTSGTGKTETALALAEHLYGGEDNLITINMSEFKEEHKVS 641 Query: 645 RLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQG 704 L+GA GYVGY +GG LTEAVR++PYSV+LLDE+EKAHP + ++ + D G + DG+G Sbjct: 642 MLLGASAGYVGYGQGGVLTEAVRKKPYSVVLLDEMEKAHPGIQDVFYNLFDKGTIKDGEG 701 Query: 705 RTVDFRNTVVIMTSNLGSDLIQERFGELD--YAHMKELVLGVVSHNFRPEFINRIDEVVV 762 +DF+NT++IMT+N + I + FGE D + E + + +FRP F+ R +V Sbjct: 702 NDIDFKNTLIIMTTNAATHGISKYFGETDINEEALLEDIRPELLEDFRPAFLGRCT-IVP 760 Query: 763 FHPLGEQHIASIAQIQLKRLYKRLEER-GYEIHISDEALKLLSENGYDPVYGARPLKRAI 821 + PL E + I +I ++ KRL E+ + L+ L DP GAR ++ I Sbjct: 761 YFPLSEDVLQKIIEINFNKIKKRLNEQYNASLKYDASILEHLLSKCKDPDTGARNVENVI 820 Query: 822 QQQIENPLAQQILSGELVPGKVI 844 + I ++ L L G+ I Sbjct: 821 NKSILPAISNACLEA-LAKGQSI 842 >UniRef50_B6EJJ8 Chaperone ClpB-1 n=12 Tax=Proteobacteria RepID=B6EJJ8_ALISL Length = 872 Score = 701 bits (1808), Expect = 0.0, Method: Composition-based stats. Identities = 315/871 (36%), Positives = 466/871 (53%), Gaps = 37/871 (4%) Query: 5 RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDI 64 RLT + +L A + + IE H LL Q + G+ + + + Sbjct: 12 RLTPGMKASLEAAAGECVQRGHFSIEFEHWFVQLLQQPTVGWQKAVEQTGMASESILEQL 71 Query: 65 NQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESR----- 119 N L+ LP+ G S LV +L + +E VL L+ R Sbjct: 72 NNHLSSLPR--GNDSAPSLSPQLVELLKDAWMIGSLNHAQLSMNEFHVLIVLKQRIEQGA 129 Query: 120 ----------GTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLT 169 ++ L T + AL KY+ +LT Sbjct: 130 YNGALSTWIKSLSSEWLNRQSITKTASSHLSSTSMLCGKNQGMEGNMSTPALDKYSQNLT 189 Query: 170 ERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVP 229 + A G LDP+ GR EIR+ I +L RR +N+P+L+G+PGVGKTAIVEGLAQ+I++G VP Sbjct: 190 QAARNGDLDPISGRGNEIRKAIDILCRRRQNSPILVGDPGVGKTAIVEGLAQQIVDGNVP 249 Query: 230 EGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKA 289 LK + LD+ L AGA +GEFE RLK V+N++ + +I+FIDE HT++GAG A Sbjct: 250 PALKNVELRNLDLSLLQAGASIKGEFENRLKDVINEIKQSATPIIVFIDEAHTLIGAGGA 309 Query: 290 DGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAI 349 G DA N+LKPALARGE + ATT EY+QY E DAAL RRFQ V + EPS D I + Sbjct: 310 AGQNDAANILKPALARGEFRSIAATTWAEYKQYFESDAALSRRFQVVSIGEPSEGDAIHM 369 Query: 350 LRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKP 409 L G+K E HH+V++ AI AA +LS RY+ +R+LPDKAI L+D A S I + + P Sbjct: 370 LSGVKTCLEKHHNVKVMQEAINAAVSLSIRYLPERKLPDKAISLLDTACSRIGLSQSAPP 429 Query: 410 EELDRLDRRIIQLKLEQQALMKESDEAS--KKRLDMLNEELSDKERQYSELEEEWKAEKA 467 +L+ + +I ++ E L E+ S RL+ + + L D + Q+ E+ + W+ EK Sbjct: 430 RQLEAVAEQICYVENEITTLNHEAALWSIDDDRLEQVQQRLIDLQEQHQEIGKCWEQEKT 489 Query: 468 SLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLL 527 + ++ +L+ EQ DL+ + I E L+ Sbjct: 490 LVEEIIVLQTKLD------EQFLNGDDLSENEDKFLLAIKMTE------LHAIQDDQPLV 537 Query: 528 RNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRS 587 +V + IAEV++ WTGIPV M++ E E L+ +E+ + RVIGQ + +S AIR S Sbjct: 538 LPQVNEQTIAEVISLWTGIPVGNMLKEEVEHLMHLEKHIGERVIGQIAPIAEISKAIRMS 597 Query: 588 RAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLV 647 RAGL D +P+G FL GP+GVGKTE AL + ++ + I+M+EF E+H VS L+ Sbjct: 598 RAGLTDLRKPVGVFLMCGPSGVGKTETALALTDLLYGGKRNITTINMTEFKEEHKVSTLL 657 Query: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTV 707 G+P GYVGY +GG LTEAVR+ PYSV+LLDE+EKAHP V +I Q+ D G ++D +GR V Sbjct: 658 GSPAGYVGYGKGGVLTEAVRKNPYSVLLLDEMEKAHPGVHDIFYQIFDKGSISDSEGREV 717 Query: 708 DFRNTVVIMTSNLGSDLIQERF--GELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHP 765 DFRNT++IMTSN + G + + + + + + F+P F+ R +V + P Sbjct: 718 DFRNTIIIMTSNAADSAVVNGCADGRPSISILTKAIFPELQNFFKPAFLGRTT-IVPYFP 776 Query: 766 LGEQHIASIAQIQLKRLYKRLEER-GYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQ 824 L ++ ++ IAQ+ L+R+ KR+++ + ++LL P GAR +++ I +Q Sbjct: 777 LNDEEMSKIAQLSLRRIEKRIKQHYNATFDYDTQVIELLVSMNQSPETGARAIEQLINRQ 836 Query: 825 IENPLAQQIL--SGELVPGKVIRLEVNEDRI 853 + LA Q + + P + L VN ++ Sbjct: 837 LMPELANQCIVRMSQSQPISEVLLTVNGNKF 867 >UniRef50_B0SCX5 Endopeptidase Clp, ATP-dependent proteolytic subunit n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SCX5_LEPBA Length = 795 Score = 701 bits (1808), Expect = 0.0, Method: Composition-based stats. Identities = 337/842 (40%), Positives = 509/842 (60%), Gaps = 72/842 (8%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 + + + Q AL AQ+ A+ N I P HL+ + +G + + ++ Sbjct: 1 MKQYDSNVQGALDIAQTEAIRRQNTEITPYHLVWGFMTLPTSV-------SGKSLIRYKS 53 Query: 63 DINQALNRLPQVEG--TGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG 120 +++ L + + G ++ S L + + A + G + F+ Sbjct: 54 TVDEYLKKQARASGEIPFDSLRTSPKLAQWFTMASSRAAENGREELKEADFL-------K 106 Query: 121 TLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPV 180 L IL ++ ++ + + + ++L + A +GKLDPV Sbjct: 107 FLPQILPELKINYEDL----------------NVKETDEEVPNFLVNLNDLAREGKLDPV 150 Query: 181 IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL 240 IGR +EIR +++L RR+KNNPVL+G GVGKTAIVEGLA++I+ G VP+ LKG+ + +L Sbjct: 151 IGRSKEIRSVMEILGRRSKNNPVLVGSAGVGKTAIVEGLAEQIVKGRVPDVLKGKTIFSL 210 Query: 241 DMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLK 300 DMG L+AG KYRGEFEE+L +L + Q G ILFIDE+H +VGAGK DGAMDA N+LK Sbjct: 211 DMGQLMAGTKYRGEFEEKLTALLRYIKGQAGEAILFIDEIHQLVGAGKTDGAMDAANLLK 270 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELH 360 PALARGELHC+GATT DE+++YI D ALERRF+ V V EPS ED I IL G+++++E+H Sbjct: 271 PALARGELHCIGATTGDEFQKYILGDQALERRFRAVPVNEPSKEDAIEILMGIRDKHEIH 330 Query: 361 HHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRII 420 H ++I+D AI A+ LS +YI D+ LPDKAIDL+DEAAS++++ ++ P EL L+ I Sbjct: 331 HGIKISDEAIYASVLLSDQYITDKFLPDKAIDLVDEAASALKLSAEAMPTELVELEGEIR 390 Query: 421 QLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELE 480 K+ Q +K+ + + +E+ E+++ +E W+ E SL +IK +++ Sbjct: 391 SKKIFAQ---------VEKKNEEILKEIEVLEKKFQAGKEIWEKEVNSLKQIASIKNKID 441 Query: 481 QAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVL 540 + K ++ A++ D S L+Y +PELEK+L + IA V+ Sbjct: 442 RVKFDLDAAQQRADYTEASRLKYAVLPELEKELSTFQNSW---------ILERNHIAAVI 492 Query: 541 ARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGS 600 AR TGIPV +++++++E LL +E +L+ V GQ E++ +++ + S AG++ RP+GS Sbjct: 493 ARQTGIPVEKILKTKQENLLHLEDDLNSVVYGQKESIREIADTLLTSYAGISSETRPLGS 552 Query: 601 FLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG 660 FL GPTGVGKTE KA+A F+FD + +VR+D+SE+ EKHSV++L+GAP GY+GY+EGG Sbjct: 553 FLLKGPTGVGKTETAKAIAKFLFDQESNLVRLDLSEYSEKHSVAKLIGAPAGYIGYDEGG 612 Query: 661 YLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL 720 LTEA+RR+PYSV+L DEVEKAHPD +ILLQ+LDDGRLTD +GRT++F+NT+VI+T+N Sbjct: 613 ILTEAIRRKPYSVVLFDEVEKAHPDFSDILLQILDDGRLTDNKGRTINFKNTIVILTTNS 672 Query: 721 GSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLK 780 + + F+PE + R+D ++ +H L + + + QL+ Sbjct: 673 KNIEVD----------------------FKPEVLGRLDAILTYHSLDSSIMEKLIEKQLR 710 Query: 781 RLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVP 840 L RL+ +G I +S+ +L E G+DP +GARPL + + PLA+ ILSG +V Sbjct: 711 SLNDRLKVKGVVIELSESTEHILREQGFDPKFGARPLGSVFNRIVNRPLAKAILSGTMVE 770 Query: 841 GK 842 GK Sbjct: 771 GK 772 >UniRef50_C7RF24 ATPase AAA-2 domain protein n=1 Tax=Anaerococcus prevotii DSM 20548 RepID=C7RF24_ANAPD Length = 834 Score = 701 bits (1808), Expect = 0.0, Method: Composition-based stats. Identities = 318/849 (37%), Positives = 517/849 (60%), Gaps = 25/849 (2%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 + K +A+ +A++LAL + NQ + LHL+ ++ +QE + +L ++ L +I Sbjct: 5 YSLKASMAIKEARNLALLNKNQEVTDLHLLKSVTDQENHVLDTMLEEFSVDKDNLTDEIT 64 Query: 66 QALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLA-D 124 +A+ +L +G + S+D R L L + A+KR I++ LA + T + Sbjct: 65 KAIGKLRSNDGLS-KLYFSRDYQRTLLLAKENAKKRYAEKITTSHLFLAFFDLEKTTSKH 123 Query: 125 ILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRD 184 IL+ G + Q + +++ +E + KY IDLT+RA++GK+DPVIG D Sbjct: 124 ILEKVGLSHEKCEQYLVNKEKEVENSERFSEKIGDLIDKYGIDLTKRAKEGKIDPVIGMD 183 Query: 185 EEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGA 244 E+ R ++L RR KNNP+LIGEPGVGK+A+VEGLA +I G+V + LK + + +L++ + Sbjct: 184 YEVDRLSEILTRRIKNNPILIGEPGVGKSAVVEGLALKIAQGDVVDFLKDKIIFSLNVSS 243 Query: 245 LVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALA 304 ++AG RGEFE R+K +++ + EG +ILFIDE+HT+VGAG + G +D N++KP L+ Sbjct: 244 VLAGTGLRGEFESRVKDLMDIVTSFEGKIILFIDEIHTIVGAGSSSGGIDISNIIKPKLS 303 Query: 305 RGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQ 364 RGE+ +GATT+ EYR +IEKD ALERRFQK+ + E S+E++ ILRG+K YE H++ Sbjct: 304 RGEITIIGATTVAEYRSHIEKDGALERRFQKILIKEASIEESYDILRGIKTNYENFHNLI 363 Query: 365 ITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKL 424 ITD AI A LS RYI DR+LPDKAIDL+DEAAS ++ ++++ P+ LD L I++L+ Sbjct: 364 ITDEAIKACVDLSDRYITDRKLPDKAIDLMDEAASMLKNKLENTPDSLDDLREDILELEE 423 Query: 425 EQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKI 484 Q + E +L + ++ Y + E + E L + I++++ + Sbjct: 424 SLQLKADDKKE----------NKLDELKKLYDKDLEIKQEETEDLRDLRRIRSDIRELVF 473 Query: 485 AIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWT 544 ++ +++ K+PEL+K E + L K + K+ ++ I +++R T Sbjct: 474 IKKRLLNEDKFEEYTKITKVKLPELKK--EEKSYLNKKYEFVKIEKLEESHIKTLISRIT 531 Query: 545 GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFL 604 IPV + + +EK+L +++ L +VIGQ EAV+ +SNAI R+ G+ + ++PIG+FLF Sbjct: 532 KIPVEDLNQDRKEKILNIDKALGKKVIGQQEAVEKISNAIIRTAVGMKNRHKPIGTFLFT 591 Query: 605 GPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTE 664 G TG+GKT L K LA+ +++ +E+++R DMSE+M+ +S ++ +GAPPG+VGYEEGG LTE Sbjct: 592 GNTGLGKTYLAKVLADTLYEGEESLIRFDMSEYMDSNSTTKFIGAPPGFVGYEEGGQLTE 651 Query: 665 AVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDL 724 VR PYSVIL DE+EKA+ +F+ILLQ+LD+GRLTD +G T+DF NT++I+TSN+ + Sbjct: 652 KVRINPYSVILFDEIEKANKQIFDILLQILDEGRLTDNRGITIDFTNTIIILTSNILAK- 710 Query: 725 IQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYK 784 +L + F+PEFINR+D +V F+ L + + I +I L+ + Sbjct: 711 ----------EDDSDLYKHELYQYFKPEFINRLDAIVKFNTLSYEDLMEITKIYLEEVKN 760 Query: 785 RLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVI 844 E G ++E ++ + + +GAR ++R + +I ++++IL +L V+ Sbjct: 761 DFGEIGVNFAYTNEVIEKIVDLSDYEEFGAREIRRVVDDKIVTMVSRKILQDDLDSTNVL 820 Query: 845 RLEVNEDRI 853 + + +D Sbjct: 821 TIMLEDDEF 829 >UniRef50_Q2T6Y8 ATP-dependent Clp protease, ATP-binding subunit ClpB n=5 Tax=Proteobacteria RepID=Q2T6Y8_BURTA Length = 958 Score = 700 bits (1807), Expect = 0.0, Method: Composition-based stats. Identities = 329/899 (36%), Positives = 492/899 (54%), Gaps = 49/899 (5%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 ++RL + AL +A + + + HL++ L ++ V+ LL ++G +A +LR Sbjct: 10 IERLNPYCRTALENAVGACVARRHDDVAVEHLLARLCDEPSADVALLLRASGADAARLRR 69 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQ-KRGDNFISSELF---------- 111 + AL+ P G GG + L+ +L +A + G+ I S Sbjct: 70 QADAALDARP--AGGGGRPAFAPSLLALLQDAWLIASLELGETQIRSAAVLAAAVARAAR 127 Query: 112 --------VLAALESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKK 163 +L +L +A A + + G++ + GA D A+ + Sbjct: 128 QPSRGGDDMLQSLRRDALVARFAHACAQSIESRGPGARDAAPGDANDTPGAHDASSAIAR 187 Query: 164 YTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRI 223 Y D T +A G++DPV GRD +IR+ + +L RR KNNPV +GEPGVGKTA+VEGLA RI Sbjct: 188 YCEDFTAKARAGRIDPVFGRDAQIRQIVDILARRRKNNPVCVGEPGVGKTAVVEGLALRI 247 Query: 224 INGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTM 283 G+VP L+ +L LD+G L AGA +GEFE+RLK V+ ++ + V+LF+DE HT+ Sbjct: 248 AEGDVPAALRHATLLGLDLGLLQAGASVKGEFEQRLKRVIAEIHASQAPVVLFVDEAHTL 307 Query: 284 VGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSV 343 +GAG GA DA N+LKPALARGEL + ATT EY++Y EKDAAL RRFQ V + P V Sbjct: 308 IGAGGPAGASDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALARRFQPVKLDSPDV 367 Query: 344 EDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRM 403 ++ ILRGLKERY+ H V I D A+VAAA LS RYI RQLPDKAIDL+D A + +++ Sbjct: 368 ATSVMILRGLKERYQDAHGVTIRDDALVAAAELSERYITGRQLPDKAIDLLDTACARVKV 427 Query: 404 QIDSKPEELDRLDRRIIQLKLEQQALMKESDE---ASKKRLDMLNEELSDKERQYSELEE 460 + +KP L+ +R I L+ E++AL ++ E R+ ++ EL+ + L E Sbjct: 428 RQQTKPAALEDAERAIQALERERRALRRDLAERCAPDTPRVADIDRELAALSARADALSE 487 Query: 461 EWKAEKASLSGTQTIKA-----------------ELEQAKIAIEQARRVGDLARMSELQY 503 W A++ + + + A V A S Sbjct: 488 AWAAQRDAAQALVEARRACRAIADAAEAAETASASGVAGVAGVAAAADVAPGAEASADAR 547 Query: 504 GKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRME 563 + + + L+R V IA+V+A WTGI ++ +LR+ Sbjct: 548 ERAARALADATHRFEHARRDAPLVRIDVDPEAIADVVADWTGIAAGKLRRDRANVMLRLA 607 Query: 564 QELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMF 623 L R+ GQ+ A++ +S A++ AG+ DP RP+G FL GP+G GKTE A+A+ +F Sbjct: 608 DTLKGRIRGQDHAIEQISEAVKAGAAGVHDPRRPLGVFLLAGPSGTGKTETALAVADALF 667 Query: 624 DSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAH 683 + ++V ++MSEF E+H VSRL+G+PPGYVGY EGG LTEAVR+RPYSV+LLDEVEKAH Sbjct: 668 GDERSIVVVNMSEFQERHDVSRLIGSPPGYVGYGEGGMLTEAVRQRPYSVVLLDEVEKAH 727 Query: 684 PDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE---RFGELDYAHMKEL 740 PDV N+ QV D G L DG+G+ VDF NTV+ +TSNLG+D+I + R G D M+ Sbjct: 728 PDVLNLFYQVFDKGSLCDGEGKEVDFANTVIFLTSNLGADVIADLAARGGRPDPDAMRAA 787 Query: 741 VLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYE-IHISDEA 799 + +S +F+P + R+ E+ + L +A IA+ +L+R+ R+ + + + Sbjct: 788 IRPALSRHFKPALLARMTEI-PYATLAPDTLADIARRKLERIAARVAAQHATRVVYDEAV 846 Query: 800 LKLLSENGYDPVYGARPLKRAIQQQIENPLAQQIL--SGELVPGKVIRLEVN-EDRIVA 855 + ++ + GAR + +Q+ + LAQ +L +G+ P IR+ ++ R V Sbjct: 847 VAHVAARCTEVESGARSVDFILQRHVLPALAQHVLVCAGDATPMAAIRIAIDANGRFVV 905 >UniRef50_C9XYK6 Chaperone protein clpB n=1 Tax=Cronobacter turicensis RepID=C9XYK6_CROTZ Length = 924 Score = 698 bits (1801), Expect = 0.0, Method: Composition-based stats. Identities = 309/878 (35%), Positives = 464/878 (52%), Gaps = 48/878 (5%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +L ++ A + N ++E +H ++ + +QE + + +++ L Sbjct: 40 FSKLGETLFRSIESATTFCKLRGNPYVELVHWINQIWHQEDNDLKHIARYFNVDSEGLER 99 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQ-KRGDNFISSELFVLAALESRGT 121 ++ +L RLP D S + + +R +N I S ++A L + Sbjct: 100 GLSYSLERLPGSATAVSD--FSYLIELAIERAWIYTSLERCENKIRSGHLLMALLTTVEL 157 Query: 122 LADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQ---------------------- 159 +L A + + + + + +++ Sbjct: 158 RRALLAVAAPLEKVVLEQLSHDFDYITRHSPEVQERESPPFLSSQSAVPGEASGAIKLQS 217 Query: 160 --ALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVE 217 +L +Y+ D+T A +GK+DPV+GRD EI I +L RR +NNP+L G+ GVGKTA+VE Sbjct: 218 TGSLAQYSTDVTALAREGKIDPVLGRDREISTIIDILLRRRQNNPLLTGDAGVGKTAVVE 277 Query: 218 GLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFI 277 GLA I G+VP L R+L+LD+ AL AGA +GEFE RLK VL + A E VILF+ Sbjct: 278 GLACAISRGDVPPSLCDVRLLSLDIVALSAGASMKGEFEARLKAVLEEAASSEQPVILFV 337 Query: 278 DELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVF 337 DE+H ++GAG + G DA N+LKPALARG+L +GATT E++++IEKD AL RRFQ + Sbjct: 338 DEIHNLIGAGNSAGTGDAANLLKPALARGQLRTIGATTWSEFKRHIEKDPALTRRFQVLQ 397 Query: 338 VAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEA 397 V EP +LRG+ ELHH+V I D A+ AA LSHR+I RQLPDKAI L+D A Sbjct: 398 VEEPDENSATDMLRGMVPVLELHHNVWILDEALRAAVKLSHRFIPSRQLPDKAISLLDTA 457 Query: 398 ASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESD--EASKKRLDMLNEELSDKERQY 455 + + + + P L L +I + K S + + +D L + + ++ Sbjct: 458 CARVAVGQHTPPYVLQELKYQIESANRQLSLATKASTFGKEDQASIDTLKSVIKLRSKEA 517 Query: 456 SELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEA 515 + LE W EK S+S +A L+ E R E + E+E QL A Sbjct: 518 NSLESRWLQEKTSVSEIIAARATLQHLCQNEEVDRAER------EALQQALLEIEAQLNA 571 Query: 516 ATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNE 575 + ++ +V+ +A +++ WTGIPV +M++ E + + L RV GQ Sbjct: 572 IRHEQA----MVHTEVSAEVVAAIVSEWTGIPVGQMLQDEMNIVRELPVRLAERVTGQTF 627 Query: 576 AVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMS 635 A+ +S I +R GLADP RP G F+ GP+G GKTE A+A M+ + ++ I+MS Sbjct: 628 ALKQISERILMARTGLADPVRPTGVFMLTGPSGTGKTETALAIAENMYGGEHNLITINMS 687 Query: 636 EFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLD 695 E+ E H+VS L G+PPGYVGY EGG LTEAVRR+PYSVILLDE+EKAHPDV + QV D Sbjct: 688 EYQEAHTVSALKGSPPGYVGYGEGGILTEAVRRKPYSVILLDEIEKAHPDVHELFFQVFD 747 Query: 696 DGRLTDGQGRTVDFRNTVVIMTSNLGSDLI----QERFGELDYAHMKELVLGVVSHNFRP 751 GR+ DG+GR +DFRNT++++TSN+GS+ I ++ D + L+ + F Sbjct: 748 KGRMEDGEGRLIDFRNTIILLTSNVGSEKISLLCRDENTVPDEEGLLTLLHNDLLKVFPA 807 Query: 752 EFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALKLLSENGYDP 810 F+ R+ V+ + PL + I ++QLKR+ R E + +DEA++ + E + Sbjct: 808 AFLGRVT-VIPYLPLKSDALMLIVKMQLKRVANRLYENHNVTLQYNDEAVRYIVEQCHVA 866 Query: 811 VYGARPLKRAIQQQIENPLAQQILSGELVP---GKVIR 845 GAR L R I+Q+I + ++ L G IR Sbjct: 867 ETGARILIRYIEQKIIPKIGGILMDSALKARLLGVTIR 904 >UniRef50_Q046D3 ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones n=59 Tax=Firmicutes RepID=Q046D3_LACGA Length = 838 Score = 697 bits (1800), Expect = 0.0, Method: Composition-based stats. Identities = 348/874 (39%), Positives = 519/874 (59%), Gaps = 87/874 (9%) Query: 2 RLDR-LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 R+++ ++ + L A+ A ++ I H++ AL+ + G LL + + Sbjct: 16 RMEKSYSDSAKNVLEIAKEQAQNFHHRIIGTEHVLLALVIEANGDAGKLLRERNVTPTLV 75 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG 120 R +I + + T ++ S L VLN + + + G I ++ +L L S Sbjct: 76 REEIERYTGYGSSPKATYMEM--SPRLSLVLNFAKQKSDELGTPQIETKHILLGLLASDQ 133 Query: 121 TLAD-ILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQA------------LKKYTID 167 LA ILK G +++Q I +S D A L K +++ Sbjct: 134 ILASLILKNIGVEPRDLSQDINDSFMDDSGEANNIFDVSSATRTKKGKSLTPNLDKVSVN 193 Query: 168 LTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGE 227 L +RA +G +DPVIGRD+EI+R IQ+L RRTKNNPVL+GEPGVGKTA+ +G+A I+N E Sbjct: 194 LNKRAREGAIDPVIGRDKEIKRVIQILSRRTKNNPVLVGEPGVGKTAVAQGIASAIVNRE 253 Query: 228 VPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAG 287 VP+ L +RV+ALDMG+L+AG KYRGEFE+R+K +L ++ + +G+VILF+DE+HT++GAG Sbjct: 254 VPDNLAKKRVMALDMGSLIAGTKYRGEFEDRMKKILKEIQR-DGSVILFVDEMHTLIGAG 312 Query: 288 KADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTI 347 A+GA+DA N+LKP+LARG++ +GATT DEY++YIEKD AL RRFQ+V + EPS E+T+ Sbjct: 313 GAEGAIDASNILKPSLARGDIQMIGATTFDEYQKYIEKDQALARRFQQVKIGEPSKEETV 372 Query: 348 AILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDS 407 IL+GL+ +YE H+V+I D AI A S RYIA+R LPDKAIDLIDEA++++++Q Sbjct: 373 DILKGLRPKYEKFHNVKIEDEAIKDAVEFSTRYIANRFLPDKAIDLIDEASAAVKIQAVG 432 Query: 408 KPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKA 467 K D R+ +L + ++ + +EA++ + + +L D+E + ++ ++ A Sbjct: 433 KA------DPRLTKLDTQINDVIHQKEEAAENQNFVQAAKLRDEENKLTQDRDKLIAR-- 484 Query: 468 SLSGTQTIKAELEQAKIAIEQARRVG-DLARMSELQYGKIPELEKQLEAATQLEGKTMRL 526 + + K+ ++ KIA + G + RM + + ++ LE L + K + Sbjct: 485 -VENKNSKKSIVDSNKIAQIVSEWTGVPVTRMKKSETKRLAHLESILHERVIGQDKAISA 543 Query: 527 LRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRR 586 + + RR Sbjct: 544 VSRAI-----------------------------------------------------RR 550 Query: 587 SRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRL 646 SR+G+ D NRPIGSFLFLGPTGVGKTEL KALA +F S+ ++R+DMSE+M++ + S+L Sbjct: 551 SRSGIKDENRPIGSFLFLGPTGVGKTELAKALAAAVFGSERNIIRVDMSEYMDQVATSKL 610 Query: 647 VGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRT 706 +G+ PGYVGYEEGG L+E VRR PYSVILLDEVEKAHPDVFN+LLQVLD+G LTD +GR Sbjct: 611 IGSAPGYVGYEEGGQLSERVRRNPYSVILLDEVEKAHPDVFNLLLQVLDEGFLTDSKGRK 670 Query: 707 VDFRNTVVIMTSNLGSDLIQERF-------GELDYAHMKELVLGVVSHNFRPEFINRIDE 759 VDFRNT++IMTSNLGS +QE E +E V V FRPEF+NRIDE Sbjct: 671 VDFRNTIIIMTSNLGSRSLQEDKTVGFAADNEDKNKLQQEKVTAAVKQFFRPEFLNRIDE 730 Query: 760 VVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKR 819 VVF L ++ + I + L RL + + IS AL +L+++G+DP GARPL+R Sbjct: 731 TVVFDSLTKKQLREIVSLMTSHLISRLARKEVTLKISPAALDVLAKDGFDPEMGARPLRR 790 Query: 820 AIQQQIENPLAQQILSGELVPGKVIRLEVNEDRI 853 AIQ ++E+ +A+ ++S ++ G+ +++ ++ ++ Sbjct: 791 AIQHELEDVIAEDLISEKIKAGQTVKVGAHQGKL 824 >UniRef50_C9M6K4 Negative regulator of genetic competence ClpC/MecB n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M6K4_9BACT Length = 826 Score = 697 bits (1798), Expect = 0.0, Method: Composition-based stats. Identities = 318/874 (36%), Positives = 481/874 (55%), Gaps = 82/874 (9%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M ++ + AL A AL ++ I HL+ + + S + LL + G+ A L Sbjct: 1 MMWQFFSDSCKRALQIAHREALKMRSKEIGTAHLLLGIAAEGTSSAAGLLEANGVTAEGL 60 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALE-SR 119 R + ++ D+ S L+ A+ + + A L+ + Sbjct: 61 RRTLK--IDETIPEPDEQTDLPFSDGARGCLDAALNSARSLDAELVDPSCLLAAVLKVND 118 Query: 120 GTLADILKAAGATTANITQAIEQM-----------RGGESVNDQGAEDQRQALKKYTIDL 168 +L G + + + ++ ++ N +G E + + ++ +DL Sbjct: 119 NGACRLLATLGVSPETLRERAAELLASSKREESPVHSPKAGNGEGDEAELAIIGQFCVDL 178 Query: 169 TERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEV 228 T RA G+LDP++GR +E RR +QVL RRTKNNPVL+G+PGVGKTA+VEGLAQ I + V Sbjct: 179 TARAAAGELDPIVGRQKETRRLMQVLCRRTKNNPVLVGDPGVGKTAVVEGLAQLIQSEMV 238 Query: 229 PEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGK 288 P+ LKG+++L L++G+LVAGAKYRG+FEER + ++ +K + ILFIDE+HT++G G Sbjct: 239 PDPLKGKKILQLNVGSLVAGAKYRGDFEERFQKLIAQASKSKD--ILFIDEIHTLIGTGN 296 Query: 289 ADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIA 348 A+G++DA NMLKP+LARGEL +GATT EYR+YIE+D ALERRFQ + +AEP + +A Sbjct: 297 AEGSLDAANMLKPSLARGELRIIGATTAAEYRRYIERDGALERRFQPIDIAEPDFDSAVA 356 Query: 349 ILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSK 408 I+ GL RYE HH V A A LS R++ DR+LPDKAI Sbjct: 357 IVSGLLPRYEEHHGVVYAPEAAETAVRLSSRFLTDRRLPDKAI----------------- 399 Query: 409 PEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKAS 468 D+++E + + S+ Sbjct: 400 ---------------------------------DLIDEAGAKAQLDRSDWPP-------- 418 Query: 469 LSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLR 528 + +K L Q + E A D + + E +QLE + + R+ Sbjct: 419 --ELKEVKTRLGQLRRDKEAAILAADFELAGRFRSDE-AETAQQLEENLSVWRRGRRMSG 475 Query: 529 NKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSR 588 ++V ++A+VL+ W G+PV +M +SE E+LL +E + +IGQ+EAV V A+RR+R Sbjct: 476 SRVGPDDLAQVLSSWCGVPVGQMSQSEAERLLTLESRVEKHLIGQSEAVSCVCRALRRNR 535 Query: 589 AGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVG 648 +GL D RPIGSFLFLGP+GVGKTEL + +A ++ SD+A++ +DMSEF ++++VSRL+G Sbjct: 536 SGLQDEKRPIGSFLFLGPSGVGKTELARVVARELYGSDKALIALDMSEFHDRYTVSRLIG 595 Query: 649 APPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVD 708 PGYVGYE+ G LTEAVRR PYSV+LLDE+EKA P V ILLQ+++DGRLTDG G TVD Sbjct: 596 TGPGYVGYEDRGQLTEAVRRHPYSVVLLDEIEKADPQVNRILLQIMEDGRLTDGHGDTVD 655 Query: 709 FRNTVVIMTSNLGS-DLIQERFGELDYAHMKELVL----GVVSHNFRPEFINRIDEVVVF 763 FRN ++IMTSNLGS + + FG D + + F PE + R+D+VV F Sbjct: 656 FRNALIIMTSNLGSREAAKSPFGFSDAGRSDQAARGVMSDELKRFFPPELLGRMDDVVYF 715 Query: 764 HPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQ 823 L + ++ I + L +RL+ RG + +S + + + GARPL+R +++ Sbjct: 716 RQLNAEDLSKIFDLLLAPAVQRLKRRGIDFSVSPQLKLAILDEAARQGAGARPLRRLVEK 775 Query: 824 QIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857 ++ +P A+ +++ G+++ + + V Q Sbjct: 776 RVSDPTAEWLIANPGASGELVCSLEDGETAVRCQ 809 >UniRef50_Q2S2Z0 ATP-dependent Clp protease, ATPase subunit n=63 Tax=Bacteria RepID=Q2S2Z0_SALRD Length = 875 Score = 696 bits (1797), Expect = 0.0, Method: Composition-based stats. Identities = 342/879 (38%), Positives = 508/879 (57%), Gaps = 95/879 (10%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 +N+ + ++ ++ A+ + +I HL+ L+ + G +L + G + +L+ + Sbjct: 5 FSNRVRDVISYSREEAVRLGHDYIGTEHLLLGLIREGDGIAVKILRNLGCDLLELKEAVE 64 Query: 66 QALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADI 125 + R + G++ ++ +VL + A+ + I +E +L+ L +A Sbjct: 65 DTV-RSTSSSTSVGNIPLTKQAEKVLKITYLEAKLYKSDVIGTEHLLLSLLRDDENIAAQ 123 Query: 126 LKAAG--ATTANITQAIEQM--------------------RGGESVNDQGAEDQRQALKK 163 + G T + ++ + G + + L Sbjct: 124 ILQQGFSVTYDAVRNELDSIISGKASSSSSGSGGSGGRLSSGYGQESSESENSNTPVLDN 183 Query: 164 YTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRI 223 + DLTE AE+ +LDP+IGR+EEI+R Q+L RR KNNPVLIGEPGVGKTAI EGLA RI Sbjct: 184 FGRDLTELAEEDELDPIIGREEEIKRVAQILSRRKKNNPVLIGEPGVGKTAIAEGLAARI 243 Query: 224 INGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTM 283 ++ +V L +R++ LD+ +LVAG KYRG+FEER+K V+ +L + ++ILFIDE+HT+ Sbjct: 244 VDRKVSRVLYDKRIVTLDLASLVAGTKYRGQFEERMKAVMKELEDND-DIILFIDEIHTI 302 Query: 284 VGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSV 343 VGAG A G++DA NM KPALARG+L C+GATTLDEYRQ IE D AL+RRFQK+ V + Sbjct: 303 VGAGGASGSLDASNMFKPALARGDLQCIGATTLDEYRQNIEGDGALDRRFQKIIVDPSTP 362 Query: 344 EDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRM 403 E+T+ IL +K YE HH+V+ ++ AI A LS RYI DR LPDKAID++DEA + + + Sbjct: 363 EETVNILSNIKSYYEDHHNVRFSEEAIDLAVQLSDRYITDRFLPDKAIDVMDEAGARVHL 422 Query: 404 QIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWK 463 P E+ L+ +I ++ E+ ++K R L ++ + + E +++W Sbjct: 423 SNIEVPPEILELEEQIEDVQEEKNQVVKSQRFEEAAR---LRDKEKTLQEELEEAKQQWH 479 Query: 464 AEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKT 523 + E + +A M+ + KI E E+Q Sbjct: 480 -------------EQAETEVHDVTSEEIAEVVAMMTGIPVDKISEPEQQ----------- 515 Query: 524 MRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNA 583 + +M ES +E ++ ++ + +S A Sbjct: 516 -----------------------KLLKMEESLKEHVVGQDEAIEK-----------LSKA 541 Query: 584 IRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSV 643 IRR+RAGL DP +PIGSF+FLGPTGVGKTEL K L ++FDS E+++RIDMSE+MEK SV Sbjct: 542 IRRTRAGLKDPEKPIGSFIFLGPTGVGKTELAKVLTEYLFDSQESLIRIDMSEYMEKFSV 601 Query: 644 SRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQ 703 SRLVGAPPGYVG+EEGG LTE VRR+PYSV+LLDE+EKAHPDV NILLQVLDDG LTDG Sbjct: 602 SRLVGAPPGYVGHEEGGQLTEKVRRKPYSVVLLDEIEKAHPDVSNILLQVLDDGILTDGM 661 Query: 704 GRTVDFRNTVVIMTSNLGSDLIQE----------RFGELDYAHMKELVLGVVSHNFRPEF 753 GR VDFRNT++IMTSN+G+ I+ ++DY MK V + + F PEF Sbjct: 662 GREVDFRNTILIMTSNIGTQDIKSFGQGIGFDQTDGEDMDYTSMKSTVQDALKNVFNPEF 721 Query: 754 INRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYG 813 +NR+D+V+VF+PL +++I I I + L++R EE G ++ + A + L++ G+D YG Sbjct: 722 LNRLDDVIVFNPLNKENIFDIIDIMSEDLFERAEELGLDLEFDEAAKEFLTDRGFDQKYG 781 Query: 814 ARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDR 852 ARPL+RA+Q+ +++P+A+ IL E+ G + + + + Sbjct: 782 ARPLRRALQKYVQDPMAEDILHDEITEGDTVLITHDGES 820 >UniRef50_A5WFU1 ATP-dependent Clp protease ATP-binding subunit ClpA n=5 Tax=Proteobacteria RepID=A5WFU1_PSYWF Length = 854 Score = 696 bits (1797), Expect = 0.0, Method: Composition-based stats. Identities = 316/861 (36%), Positives = 485/861 (56%), Gaps = 60/861 (6%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 L+ +++L A +LA ++++ H L E + L S G + LR+D+ Sbjct: 2 LSRHLEVSLRLAMTLARQKSHEYLTVEH--LLLALLENNNAVTTLKSCGADISSLRSDLE 59 Query: 66 QALNRL-PQVEGTGGD-VQPSQDLVRVLNLCDKLAQKRGDNFI--SSELFVLAALESRGT 121 +++ P+++ Q +Q R+L Q G + S++ V E Sbjct: 60 AYIDKHTPKLDADLEQTPQATQGFDRILQRAIFHVQSIGSGRLVQGSDILVSMFSEHDTY 119 Query: 122 LADILKAAGATTANITQAIEQMRGG----------ESVNDQGAEDQRQALKKYTIDLTER 171 +LK G + +TQ + G E + + A ++ L ++ ++L +R Sbjct: 120 AVYLLKKQGVSRLELTQYLSHGNEGDETREGPSDNEGADPKAARAKKDPLTEFAVNLNKR 179 Query: 172 AEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEG 231 A +GK DP+IGR EI RT QVL RR KNNP+L+G+PGVGKT+I EGLA IIN + P+ Sbjct: 180 AAEGKTDPLIGRSSEIERTAQVLCRRRKNNPLLVGDPGVGKTSIAEGLAWLIINNKAPKP 239 Query: 232 LKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADG 291 L+G + +LD+G+L+AG KYRG+FE+R+K +L++L K+ N ILFIDE+H ++GAG + Sbjct: 240 LQGCVIYSLDIGSLIAGTKYRGDFEKRMKALLDELKKKP-NAILFIDEVHMIIGAGSSMS 298 Query: 292 A-MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAIL 350 + MD N++KPALA GEL C+G+TT EYRQ EKD AL RRFQK+ V EPSV+D+I IL Sbjct: 299 SNMDVSNLIKPALANGELRCIGSTTFTEYRQVFEKDHALSRRFQKIDVNEPSVDDSIEIL 358 Query: 351 RGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPE 410 RGLK RYE H+V+ TD A+V+A LS ++I +R LPDKAID+IDEA + R+ + Sbjct: 359 RGLKSRYEEFHNVKYTDAALVSAVQLSAKHIHERFLPDKAIDVIDEAGAYKRLGVTPDAA 418 Query: 411 ELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLS 470 +++ E+ L+ E + +D+ ++ L +K Sbjct: 419 QVE-----------EENQLIDELNSTDVNAVDLNDDVLGNKT------------------ 449 Query: 471 GTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNK 530 I+ D + + +E E + + Sbjct: 450 ----------DYDAQIDADESGLDAEANDDNDDDALESVESDFEDTDEALDDETQAAPTV 499 Query: 531 VTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590 + +I ++++ IP + ++ L +E++L+ V GQ+EA+ +S+AI+ SRAG Sbjct: 500 IDVEDIEAIISKLARIPPKSVSNDDKSLLQHLERDLNRLVFGQDEAIKTLSDAIKLSRAG 559 Query: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAP 650 L ++PIGSF+F GPTGVGKTE+ K LAN M ++R DMSE+ME H+ SRL+GAP Sbjct: 560 LKSADKPIGSFMFAGPTGVGKTEVSKQLANLM---GIELIRFDMSEYMEAHTASRLIGAP 616 Query: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFR 710 PGYVG+++GG LTE + + P+ V+LLDE+EKAHPDVFN+LLQV+D G LTD GR F+ Sbjct: 617 PGYVGFDQGGLLTEKINQHPHCVLLLDEIEKAHPDVFNLLLQVMDHGSLTDNNGRVASFK 676 Query: 711 NTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQH 770 ++IMT+N+G++ I + ++ F PEF NR+D ++ F+PL Sbjct: 677 QVILIMTTNVGAENISRSSMGFTKQDHSKDNTEAMNRVFTPEFRNRLDAIIQFNPLDPSI 736 Query: 771 IASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLA 830 + S+ L L +L+++ + I DE + L+E GYD + GARP++R IQ +I+ PLA Sbjct: 737 VVSVVDKFLVELQAQLDDKQVMLEIDDEVREYLAEKGYDRLMGARPMQRLIQNEIKKPLA 796 Query: 831 QQILSGELVPGKVIRLEVNED 851 +L G+L G + + ++ED Sbjct: 797 NMVLFGDLAEGGAVHVTLSED 817 >UniRef50_A7APH1 Clp amino terminal domain containing protein n=1 Tax=Babesia bovis RepID=A7APH1_BABBO Length = 1005 Score = 696 bits (1796), Expect = 0.0, Method: Composition-based stats. Identities = 308/906 (33%), Positives = 490/906 (54%), Gaps = 65/906 (7%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 + + ++ L +Q A + IE H++ L+ + G S +L+ G+ + +L Sbjct: 74 LNFNNFSDDAVKVLMLSQEEAKRGAVKQIEIKHILLGLVAVQRGIASNVLSHFGVTSKKL 133 Query: 61 RTDINQALNRL--PQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES 118 R I+ + P + ++ SQ+ L L A+ G+ + +E +L L + Sbjct: 134 RDVIDNLEDNTIPPDDKNEDYNLIFSQESKNALQLSSIEAESMGNKTLETEHILLGMLGT 193 Query: 119 RG-TLADILKAAGAT------------------------TANITQAIEQMR----GGESV 149 T IL A T QA+ Q G S Sbjct: 194 HSYTFRQILDALTVNIDAMRNLTLKYIAEEKEKPAEEMPTDTWKQALSQYTYIPTPGRSE 253 Query: 150 NDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPG 209 + Q L +TID+T +AE+GKL V+ RD EI R+I+ L R+ K NP+LIGEPG Sbjct: 254 DILRDTYQVSPLNAFTIDITRKAEEGKLQKVLCRDSEIDRSIRTLCRKYKRNPILIGEPG 313 Query: 210 VGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQ 269 VGKTA+VEG+A ++ G V E + +R+ LD+G LVAGA++RG+FEERL ++ ++ Sbjct: 314 VGKTAVVEGIAMQLREGHVLEKMLNKRLRQLDVGLLVAGARFRGQFEERLTRLIEEIKNA 373 Query: 270 EGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAAL 329 + N+IL IDE H +VGAG +GA+DA N+LKP LARGE+ C+ TT EY+++ EKDAAL Sbjct: 374 K-NIILVIDEAHMLVGAGAGEGALDAANLLKPTLARGEIQCIAITTPKEYQKHFEKDAAL 432 Query: 330 ERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDK 389 RRFQ + V EPS +DT IL E H+V+ A+ AA S ++I +R LPDK Sbjct: 433 CRRFQPIHVKEPSDKDTQIILNATAEACGRFHNVKYNMDAVAAALKYSKQFIPERYLPDK 492 Query: 390 AIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELS 449 AID++DEA S ++ R QLK+E + + E + N + Sbjct: 493 AIDILDEAGSLAKI-------------RFYEQLKVEWKHAVNPLKERGVYDVLTSNFAKN 539 Query: 450 DKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPE- 508 K + + + AK+ + + ++ I E Sbjct: 540 ANNEAIESDVHSSKVSTQHSEANIGVDSVTDVAKMPSQTYKGYHIDGSINFPATDMISEE 599 Query: 509 -LEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELH 567 + + + + + L +V +AEV++ WTG+P+ ++ + E E + +EQELH Sbjct: 600 NYDTEYTSNASWDSDSTETL-CEVNTEHVAEVVSNWTGVPLKKLTQGEIEAIRNLEQELH 658 Query: 568 HRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDE 627 V+G EAV ++ AIRR++ + +P RPIGSFLF GP GVGK+E+ K L MF +++ Sbjct: 659 KSVVGHEEAVKNIAKAIRRAKTNIKNPERPIGSFLFCGPPGVGKSEIAKTLTKLMF-TED 717 Query: 628 AMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVF 687 ++++DMSE+ E HS+SR++G+PPGY G++ GG LTE +R+ PYSV++ DE+EKAH +V Sbjct: 718 NLIKLDMSEYNEPHSISRILGSPPGYKGHDSGGQLTEKLRKNPYSVVMFDEIEKAHRNVL 777 Query: 688 NILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERF----------------GE 731 NILLQ+L+DG+LTD + +TV F+NT++IMTSN+GS +I++ + Sbjct: 778 NILLQILEDGKLTDSKNQTVSFKNTIIIMTSNVGSHIIEKAVRGIHTFGFNIEDVLNDKQ 837 Query: 732 LDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGY 791 DY K+ V + F+PE I+RID+V++F PL EQ + IA++ ++ KR ++ G Sbjct: 838 TDYEKAKKQVCDELKSTFKPELIDRIDDVILFRPLNEQQMKQIAKLMIEATLKRAKDAGI 897 Query: 792 EIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNED 851 ++ + D + + + D GARP++R I +++ LA ++S + +PG R+ V+ + Sbjct: 898 DVVVDDSFIDHIMKLPRDATGGARPIRRLITTHLDDQLADFVISKDYIPGIKYRITVDSN 957 Query: 852 RIVAVQ 857 + ++ Sbjct: 958 AQIKIK 963 >UniRef50_B8L5D3 Type VI secretion ATPase, ClpV1 family n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L5D3_9GAMM Length = 917 Score = 695 bits (1794), Expect = 0.0, Method: Composition-based stats. Identities = 311/905 (34%), Positives = 480/905 (53%), Gaps = 58/905 (6%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 + +L + + A A +L + N ++ HL ALL Q + +GI L Sbjct: 9 ISKLDDTCRQAAERAANLCMARGNYEVDLEHLFLALLEQPQSDFVLIARRSGILPESLER 68 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNF-ISSELFVLAALESRGT 121 D+N +++ G SQ + ++ +A + I S +LA L Sbjct: 69 DLNDEISQFKT--GNSRTPVFSQHIPKLFEHAWLIASLDSETTRIRSGHLLLALLTEPDL 126 Query: 122 L--------------ADILKAAGATTANITQAIEQMRGGESVND---------------Q 152 D LK A +Q Q + + Sbjct: 127 AQLAYRGSKLFVRFKRDELKHDFAKLTEGSQEAVQTVRFADASAAGEAGEDEGAVPGEAK 186 Query: 153 GAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGK 212 G + AL ++T +LT+RA GK+DPVIGRD EIR+ I +L RR +NNP+L GE GVGK Sbjct: 187 GGLSKTPALDQFTTNLTQRARDGKIDPVIGRDGEIRQVIDILMRRRQNNPILTGEAGVGK 246 Query: 213 TAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGN 272 TA+VEGLA+RI + +VP+ L+G + LDMG L AGA +GEFE RLK V++++ K Sbjct: 247 TAVVEGLARRIADKDVPDVLQGVELHTLDMGLLQAGASVKGEFENRLKNVIDEVKKSPHP 306 Query: 273 VILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERR 332 +ILFIDE HTM+GAG G DA N+LKPALARGEL + ATT EY++Y EKDAAL RR Sbjct: 307 IILFIDEAHTMIGAGGTAGQNDAANLLKPALARGELRTIAATTWGEYKKYFEKDAALARR 366 Query: 333 FQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAID 392 FQ V V EPS A+LRG+ E H ++++ D A+ A LSHRYI+ RQLPDKA+ Sbjct: 367 FQVVKVEEPSEALAAAMLRGMVGLMEAHFNIRVLDEAVTEAVRLSHRYISGRQLPDKAVS 426 Query: 393 LIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKES---DEASKKRLDMLNEELS 449 ++D A + + + + P ++ + + +L+ E AL +E+ + +RL L+ + + Sbjct: 427 VLDTACAKVALGQSATPAIIEDTRKHLDRLQAEISALQRETAGGSDQHGERLAELHAQQA 486 Query: 450 DKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGD-------LARMSELQ 502 + + + EE E+ ++ ++EQ + A D +A+ + + Sbjct: 487 EAQAVLTSNEERLGRERDLAGRIAVLRQQMEQGEAASGDPEPSNDDNEGDVAVAKPAAKR 546 Query: 503 YGKIPELEKQLEAATQLEGK------TMRLLRNKVTDAEIAEVLARWTGIPVSRMMESER 556 EL Q +L+ + ++ +V +AE+++ WTG+P+ RM++ E Sbjct: 547 GKAKAELSPQHAELARLQAELRELQGETPMVPLQVDGTVVAEIVSAWTGVPLGRMVKDEI 606 Query: 557 EKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCK 616 + + L RVIGQ+ A+DA++ +R + A L DPN+P G F+F+GP+GVGKTE Sbjct: 607 RTVRTLGNLLVERVIGQDHALDAIAQRVRTATAKLEDPNKPRGVFMFVGPSGVGKTETAL 666 Query: 617 ALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILL 676 ALA+ ++ + +V I+MSE+ E HSVS L G+PPGYVGY EGG LTEAVRR PYSV+LL Sbjct: 667 ALADILYGGERKLVTINMSEYQEAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLL 726 Query: 677 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAH 736 DEVEKAHPDV + QV D G + D +GR +DFRNT++I+TSN+GS I + Sbjct: 727 DEVEKAHPDVLEMFFQVFDKGMMDDAEGREIDFRNTLIILTSNIGSSQIMQACLNKPAEE 786 Query: 737 MK------ELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEER 789 + + + V+ F+P F+ R+ +VV ++P+ + +A I ++L R+ R + Sbjct: 787 IPGAEALSDALRPVLMRTFKPAFLGRL-KVVPYYPINDDVLAQIITLKLGRIRDRVIANH 845 Query: 790 GYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKV--IRLE 847 D ++ + + GAR + + + +A+ +L+ ++ I++ Sbjct: 846 KATFSWDDSLVEAVLARCTEVDSGARNVDHILNGTLLPEIAESVLAAMAEGNRINAIKVT 905 Query: 848 VNEDR 852 + Sbjct: 906 AGKKG 910 >UniRef50_D2QZM9 Type VI secretion ATPase, ClpV1 family n=6 Tax=Bacteria RepID=D2QZM9_9PLAN Length = 915 Score = 694 bits (1791), Expect = 0.0, Method: Composition-based stats. Identities = 311/898 (34%), Positives = 484/898 (53%), Gaps = 54/898 (6%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +L + A+ A N ++E H + +L V ++ + +L Sbjct: 10 FGKLNSLAYRAIEAATVFCKMRGNPYVELAHWLHQILQLPDSDVHKIIKQFNLEPSRLAR 69 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKR-GDNFISSELFVLAALESRGT 121 D+ + L+R P+ G+ S L A D+ + + ++ ++++ Sbjct: 70 DLTETLDRFPR--GSSSISDLSSHLEDATQQGWVYATLMFKDSQVRTGYLIVGMIKTKTL 127 Query: 122 LADIL-------------------KAAGATTANITQAIEQMRGG--------ESVNDQGA 154 +L + + + +A + + G A Sbjct: 128 NNALLSISKEFGKINADTLIDKFAEVVAGSPEDSLRASDGTQVGGGAVPGEASGAMAPAA 187 Query: 155 EDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214 +++ALK+++IDLTERA +G++DP++GRDEEIR+ + +L RR +NNP+L GE GVGKTA Sbjct: 188 MGKQEALKQFSIDLTERARKGEIDPIVGRDEEIRQLVDILMRRRQNNPILTGEAGVGKTA 247 Query: 215 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 274 +VEG A RI +G+VP LK + +LD+G L AGA +GEFE RL+ V+ ++ E +I Sbjct: 248 VVEGFALRIASGDVPPSLKDVSLRSLDIGLLQAGASMKGEFENRLRQVIEEVQSSEQPII 307 Query: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334 LFIDE HT++GAG A G DA N+LKPALARG+L V ATT EY+++IEKD AL RRFQ Sbjct: 308 LFIDEAHTLIGAGGAAGTGDAANLLKPALARGKLRTVAATTWAEYKKHIEKDPALTRRFQ 367 Query: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394 V V EPS + I ++RG+ E HH VQI D A+ A+ LSHRYI RQLPDK++ L+ Sbjct: 368 VVQVGEPSEDKAILMMRGMASTLEQHHRVQILDEALEASVRLSHRYIPARQLPDKSVSLL 427 Query: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASK--KRLDMLNEELSDKE 452 D + + + + P E++ R+I L++EQ + +E KR ++ +L+ + Sbjct: 428 DTTCARVAISQHAVPAEVEDCRRKIEALEVEQGIIAREKAVGVDTTKREKEVDSKLAIER 487 Query: 453 RQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIE----------------QARRVGDLA 496 + LE+ W EK + I+ +L +E Sbjct: 488 ERLKGLEQRWTDEKTLVDEILDIRGKLRGQTGKVEGTHSKLEKAADKAAKEAPPVAAPTP 547 Query: 497 RMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESER 556 ++E + + +L+A L+ V + +A V+A WTGIPV RM+++E Sbjct: 548 PLTEAERAPLLAKLTELQAKLTALQGESPLILPTVDEQAVASVVADWTGIPVGRMVKNEV 607 Query: 557 EKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCK 616 E +L++ + L RVIGQ+ A+ ++ I+ SRA L +PN+PIG FL G +GVGKTE Sbjct: 608 EAVLKLAETLGQRVIGQDHAMKMIARRIQTSRAQLENPNKPIGVFLLAGTSGVGKTETAL 667 Query: 617 ALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILL 676 ALA ++ ++ ++ I+MSEF E H+VS L G+PPGYVGY EGG LTEAVRR+PYSV+LL Sbjct: 668 ALAEALYGGEQNVITINMSEFQEAHTVSTLKGSPPGYVGYGEGGILTEAVRRKPYSVVLL 727 Query: 677 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGE----L 732 DEVEKAH DV + QV D G + DG+GR +DF+NT++++TSN GSDLI + Sbjct: 728 DEVEKAHGDVHELFFQVFDKGWMEDGEGRVIDFKNTLILLTSNAGSDLIMNMCKDPELLP 787 Query: 733 DYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLE-ERGY 791 D + + + + F + R+ + ++PL + IA+I ++QL+R+ KR+ Sbjct: 788 DPEAIAKSLRDPLLKVFPAALLGRL-VTIPYYPLSDSMIAAITRLQLRRIEKRIGVNHKV 846 Query: 792 EIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVN 849 SDE LKL+ + G R + + + ++++IL +V V ++E+ Sbjct: 847 PFTYSDEVLKLIVSRCTELESGGRMIDSILTNTMLPAISEEILKRMMVGSAVKKIEIT 904 >UniRef50_D1J7B8 ATP-dependent Clp protease ATP-binding subunit clpA homolog n=1 Tax=Ectocarpus siliculosus RepID=D1J7B8_ECTSI Length = 903 Score = 693 bits (1788), Expect = 0.0, Method: Composition-based stats. Identities = 355/905 (39%), Positives = 522/905 (57%), Gaps = 112/905 (12%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 +R T + + +Q + + F+ ++ LL + G + GIN ++R Sbjct: 1 MFERFTERALQVIMMSQEESRRLGHNFVGTEQILLGLLGEGCGVTINAVREYGINIRKVR 60 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES-RG 120 ++ + + + ++ + ++L + K ++ ++I++E LA L G Sbjct: 61 IEVERLIGKGTGFVAI--EIPFTPRAKKILEMSIKQSKDLNHSYINTEHIFLALLNDTDG 118 Query: 121 TLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQR---------------------- 158 A +L+ GA I I Sbjct: 119 ICAKVLQNLGANIPRIKSYILNELDQNHEGSPKVLANVASGEQSSNPNIKQTKDLFLFDD 178 Query: 159 --------QALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGV 210 L +YT DLTE AE+ K+DPV+GR+ EI R IQ++ RR KNNP+LIGEPGV Sbjct: 179 LDPSSLTAPNLMEYTTDLTESAERAKIDPVVGRENEIERVIQIISRRRKNNPILIGEPGV 238 Query: 211 GKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQE 270 GKTA+ EGLAQRI+ EVP L ++ LD+ L+AG KYRGEFEERLK ++ +L +Q+ Sbjct: 239 GKTAVAEGLAQRIVQREVPSELHDYKIFVLDITLLLAGTKYRGEFEERLKRIVQELKEQK 298 Query: 271 GNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALE 330 N+I+ IDE+HT+VGAG A+GA+DA N+LKPALARGEL C+GATT+DEYRQ+IEKD ALE Sbjct: 299 -NIIIVIDEVHTLVGAGAAEGALDAANILKPALARGELQCIGATTIDEYRQHIEKDPALE 357 Query: 331 RRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKA 390 RRFQ V+V EPS+E+TIAIL+GL+ RYE HH ++IT+ A+VAAA L +YIADR LPDKA Sbjct: 358 RRFQPVWVNEPSIEETIAILKGLRLRYEQHHRLEITNEALVAAANLGAQYIADRFLPDKA 417 Query: 391 IDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSD 450 IDLIDE ++ +R+ P + LD+ + ++ ++ ++E Sbjct: 418 IDLIDEGSARVRLVNYRLPPAVQILDKELRRILEDKDLAVREQ----------------- 460 Query: 451 KERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELE 510 ++ ++++++ A G L R+ Sbjct: 461 ----------RFETATEIRDDELSLRSQMGAIIKASNTPIPKGVLERL------------ 498 Query: 511 KQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRV 570 KV +IA ++A WTG+PV+++ + E +LL +E LH RV Sbjct: 499 -------------------KVGSQDIASIVALWTGVPVTKITKDENTRLLELENVLHQRV 539 Query: 571 IGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMV 630 IGQ EAV AV+ A+RR+R G+ + RPI SF F GPTGVGKTEL K LA+F F +++AMV Sbjct: 540 IGQKEAVSAVARAVRRARVGMRNMKRPIASFFFSGPTGVGKTELTKTLASFFFGAEDAMV 599 Query: 631 RIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNIL 690 R+DMSEFME+H+V++L+G+PPGY+GY EGG LTEAVRR+PY+VIL DEVEKAHPDVFN+L Sbjct: 600 RLDMSEFMERHTVAKLIGSPPGYIGYNEGGQLTEAVRRKPYTVILFDEVEKAHPDVFNLL 659 Query: 691 LQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQER---------------FGELDYA 735 LQ+L+DGRLTD +GR +DF+NT++IMTSNLGS IQ+ + YA Sbjct: 660 LQILEDGRLTDSKGRIIDFKNTILIMTSNLGSKAIQDNDLSSQGMGFGGEKADTQKTKYA 719 Query: 736 HMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRL-EERGYEIH 794 + V + F+PEF+NRIDE++VF L + +I IA I + L +R+ +E+ + Sbjct: 720 QLCNTVGESLKAFFKPEFLNRIDEIIVFEQLTKTNITEIAVIMVNDLIERVKKEKDITLS 779 Query: 795 ISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKV----IRLEVNE 850 ++ ++LL E G++P YGARPL+RA+ + +E+ ++ + L + I ++V+ Sbjct: 780 LTPRMMELLVEEGFNPTYGARPLRRALVKLVEDKVSLEYLRYKNENDDEDPVDILVDVDL 839 Query: 851 DRIVA 855 +++ Sbjct: 840 NKVKV 844 >UniRef50_C9LKK9 Negative regulator of genetic competence ClpC/MecB n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LKK9_9BACT Length = 866 Score = 693 bits (1788), Expect = 0.0, Method: Composition-based stats. Identities = 331/896 (36%), Positives = 489/896 (54%), Gaps = 104/896 (11%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M + L+ L +++ A+ ++ L L LL+ ++ LL S G++ L Sbjct: 25 MTYE-LSAALTNILTYSKTEAIRFKQPIVDELCLFLGLLHNGNSRIADLLRSTGVSIEAL 83 Query: 61 RTDIN-QALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESR 119 R I Q + ++ ++ ++ R+L L A++ G + +LA L + Sbjct: 84 RDAIEHQFTVSVETLDAVSDNIILNETCRRILRLSVLEARRAGSKMADEDHLLLAILRDK 143 Query: 120 GTLA-DILKAAGATTANITQAIE--------------------------QMRGGESVNDQ 152 IL T + I + + E+ Sbjct: 144 DNKCLPILHQNNITYSGIASLLNPTSEVSAGFGVADEAPEGFPDEKPQGDYKHSETKTRD 203 Query: 153 GAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGK 212 + + DLT+ A LDPVIGR+ EI+R Q+L RR KNNP+LIGEPGVGK Sbjct: 204 KQTSDTPVIDNFGTDLTKLAADEALDPVIGRENEIQRIAQILSRRKKNNPILIGEPGVGK 263 Query: 213 TAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGN 272 +A+VEGLA II+G+VP L+ RR+++LDM ++VAG +YRG+FE+RL+ ++ +L Sbjct: 264 SAVVEGLANLIISGKVPRILQHRRIVSLDMASIVAGTQYRGQFEDRLQRLIKELRAH-SE 322 Query: 273 VILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERR 332 +ILFIDE+HT++GAG A G++DA N+LKPALARGE+ C+GATT DEYR+ IEKD ALERR Sbjct: 323 IILFIDEIHTIIGAGSAPGSLDAANILKPALARGEIQCIGATTTDEYRKTIEKDGALERR 382 Query: 333 FQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAID 392 FQK+ +A + E T+ ILR LK+RYE HH+V TD A+ A L+ RYI+ R LPDKAID Sbjct: 383 FQKIQLAPTTPEQTLEILRNLKKRYEEHHNVAYTDDALHACVNLTTRYISGRALPDKAID 442 Query: 393 LIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKE 452 +DEA S + + PE +++L++ I LK + K + L +E++ Sbjct: 443 ALDEAGSRVHISGVKVPENIEKLEKCIADLKRHKTEAAKAQNYELAAN---LRDEVAQLT 499 Query: 453 RQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQ 512 + ++W ++K D ++ I + Sbjct: 500 DKLEHANKDW---------IDSLKE----------------DRPTVTAEDISTIVSMMSG 534 Query: 513 LEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIG 572 + + +++RL M+ L +VI Sbjct: 535 IPVQRMAQDESIRL---------------------------------KGMKAALQAKVIS 561 Query: 573 QNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRI 632 Q+EA+ + AI R+R GL +RPIG+FLF+GPTGVGKT L K LA +MF S E ++RI Sbjct: 562 QDEAISHLVRAITRNRLGLKGTDRPIGTFLFVGPTGVGKTYLVKCLAEWMFGSKEDLIRI 621 Query: 633 DMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQ 692 DMSE+ EK+S SRLVGAPPGYVGY+EGG LTE VRR PYSVILLDE+EKAHPDVFN LLQ Sbjct: 622 DMSEYGEKYSTSRLVGAPPGYVGYDEGGQLTEKVRRHPYSVILLDEIEKAHPDVFNTLLQ 681 Query: 693 VLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE----------RFGELDYAHMKELVL 742 V+D+GRLTDG G TVDFRNT++IMTSN G+ +++ + D +++++ Sbjct: 682 VMDEGRLTDGNGTTVDFRNTIIIMTSNSGTRQLKDFGRGIGFKEAATDDADGKMVEQIIR 741 Query: 743 GVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKL 802 + F PEF+NR+D+++ FHPL E IA +++ L +RLE+ + ++ A Sbjct: 742 KALQKQFSPEFLNRLDDIITFHPLTEADAGKIADLEIGALKERLEKMQLSLELTTAAKDY 801 Query: 803 LSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPG---KVIRLEVNEDRIVA 855 + + G++ YGAR LKR+IQ IE+ + I++ + IR +V ++++VA Sbjct: 802 VVKKGFNVQYGARSLKRSIQANIEDAICDLIMNETQDKTEQPQTIRFDVVDEKLVA 857 >UniRef50_C1MLM7 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MLM7_9CHLO Length = 886 Score = 692 bits (1786), Expect = 0.0, Method: Composition-based stats. Identities = 346/766 (45%), Positives = 502/766 (65%), Gaps = 63/766 (8%) Query: 149 VNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEP 208 V +++ AL+++ D+TE A+QG LDP++GRD+E+RR + +L RRTKNNP+L+G P Sbjct: 102 VRGDDPDEELSALERFCTDVTEEAKQGVLDPLVGRDDEVRRLVHILCRRTKNNPILLGRP 161 Query: 209 GVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAK 268 GVGKTAIVEGLAQRI+ G+VP L G R+L LD+GA+ AG + GEFEERL V++++ + Sbjct: 162 GVGKTAIVEGLAQRIVAGDVPTSLLGARLLELDLGAVGAGCQMPGEFEERLSIVVSEVVE 221 Query: 269 --QEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKD 326 Q+G +I+FID++H + G + +LKPAL RG L C+GA+T++++++ IE+D Sbjct: 222 ASQKGGIIMFIDDIHNLC--PPPPGGNNGAAILKPALGRGLLKCIGASTVEKFKKSIEQD 279 Query: 327 AALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQL 386 AALERRFQ+V VAEP + T+++LRGL+ RYE HH ++I + A+VAAA L+ RY+ R L Sbjct: 280 AALERRFQQVPVAEPDIAQTVSVLRGLRPRYETHHSIKIHESAVVAAAKLASRYVQGRCL 339 Query: 387 PDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKR------ 440 PDKAIDL+DEAA+++RMQ KPE+LD +DR++ QL E+ + E K Sbjct: 340 PDKAIDLLDEAAAAVRMQKSLKPEDLDVVDRKMSQLCKERDQIKARLIEDMHKHGSGGKM 399 Query: 441 --------LDMLNEELSDKERQYSELEEEWKAEKASLSGTQTI----------------- 475 + L E + +++ +LE+E KA + T + Sbjct: 400 AASCLHELNEELVRERTKQQKLLRDLEKEKKASREYKRATAELSFSERRLVNAHEKQRQA 459 Query: 476 -------------------KAELEQAKIAIEQARRVGDLARMSELQYGKI-----PELEK 511 +AE+ +AK A +A + LA L +I E K Sbjct: 460 ADNVKKVTVALQRAQDTDNQAEVLEAKAAATRAEQDAKLADKETLHLSEIIARAKVECTK 519 Query: 512 QLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVI 571 E + + +++VTD +IA V++RWTG+PV++++ SE+ KLL+++ ELH RVI Sbjct: 520 AEEEIMSISEGNGLMTKDEVTDVDIATVVSRWTGVPVAKLVASEKAKLLQLDAELHQRVI 579 Query: 572 GQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVR 631 GQ+ AV +V+ A++RSRA L+DPN P+ SF+FLGPTGVGKTEL KALAN++F+SD A++R Sbjct: 580 GQDHAVTSVAEAVQRSRADLSDPNGPVASFMFLGPTGVGKTELAKALANYLFNSDNALIR 639 Query: 632 IDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILL 691 +DMSE+MEKHSV+RL+GAPPGY+GY+EGG LT+AVR++PYS++L DE+EKAH DVFN+LL Sbjct: 640 LDMSEYMEKHSVARLIGAPPGYIGYDEGGMLTDAVRQKPYSIVLFDEIEKAHVDVFNVLL 699 Query: 692 QVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLI----QERFGELDYAHMKELVLGVVSH 747 Q+LD+G +TD QGRTV FRN ++IMTSNLGSD I + R G MK+ V+ V Sbjct: 700 QLLDEGHVTDTQGRTVSFRNCLIIMTSNLGSDEIAFGDRGRRGRRGPGEMKDKVMAHVRA 759 Query: 748 NFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENG 807 +FRPEFINR+DE +VF PL I I Q+Q +L +R+E + ++ + A+ L+ G Sbjct: 760 HFRPEFINRLDEFIVFEPLSHSQIMEIVQLQCNKLVERVEGQRMKLDLQPSAIDYLARKG 819 Query: 808 YDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRI 853 +DP YGARP+KRAIQ ++ +A ++L G I + ++D + Sbjct: 820 FDPTYGARPVKRAIQSELIQNMANKLLRGIFQEDDTIVVSADKDGL 865 >UniRef50_Q8SQU0 HSP 101 RELATED PROTEIN n=2 Tax=Apansporoblastina RepID=Q8SQU0_ENCCU Length = 851 Score = 691 bits (1784), Expect = 0.0, Method: Composition-based stats. Identities = 335/838 (39%), Positives = 517/838 (61%), Gaps = 25/838 (2%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M + T + Q AL AL ++N IEP HL+ A+L+ + + +L+ N + Sbjct: 1 MTTRKYTERAQNALKMCVDEALANNNNTIEPEHLLKAILSDQTSVLHNVLSPTERN--NV 58 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG 120 + + + + + + + + + L +VL + + ++S VL+ LE Sbjct: 59 KNALIKRIGGFAK-QYNCTEPRVGETLAKVLMAAESKGE---GEYVSVNALVLSLLEVES 114 Query: 121 TLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPV 180 ++ A + +I + +E+ + + + A+D + ++ +D+ E+A Q DPV Sbjct: 115 -----IRELIANSEDIRKKVEEQTKNKRFDSRNADDGTDVMSRFAVDMVEQARQNVFDPV 169 Query: 181 IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL 240 IGRDEEIRR +++L ++TK+N +L+G+PGVGKTAIV G+AQ I NGE P L+G R+ + Sbjct: 170 IGRDEEIRRVLEILSKKTKSNAILVGKPGVGKTAIVNGIAQLIANGEAP-TLRGARIYNV 228 Query: 241 DMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLK 300 D+G++VAG +RG+FEERLK ++ + G VILFIDE+H ++GAGK DGAMDA NMLK Sbjct: 229 DVGSMVAGTSHRGDFEERLKTLVKEAETTPG-VILFIDEIHIVLGAGKTDGAMDAANMLK 287 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELH 360 P LA G + C+GATT DEYR+YIE D A ERRF +V V EPS+ED+I +LRGLK R E + Sbjct: 288 PGLAAGTIKCIGATTHDEYRKYIENDPAFERRFVQVVVNEPSIEDSITMLRGLKGRLEAY 347 Query: 361 HHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRII 420 H V+I D AIV A S +YI++R+LPD AIDL+D A +S+ + ++S+P+E+ + Sbjct: 348 HGVKIADSAIVYAVNSSKKYISNRRLPDVAIDLLDTACASVMIALESEPQEILNQKSKAW 407 Query: 421 QLKLEQQALMKE----SDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476 L + + +L + DE + K+L + EEL + +EE + +K + + +K Sbjct: 408 GLDIAKTSLEFDLSQKKDEQTLKKLKEVVEELEKVKASLQPMEEAYLRDKKHIIEAKKLK 467 Query: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 536 +LE K+ + QA R + +L+ IP +E +L +LE +++ + + + + Sbjct: 468 KKLEDTKLRLAQAERDRNTYVAYDLKTNVIPVIESEL---KRLELESVVV----ILPSHV 520 Query: 537 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNR 596 AE+++RWTGI V R+ E E+L+ M + R+ GQ+ AVDA+ ++I +SR GL D +R Sbjct: 521 AEIISRWTGIDVKRLTIKENERLMEMSSRIKKRIFGQDHAVDAIVDSILQSRVGLDDDDR 580 Query: 597 PIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGY 656 P+GSFL LGPTGVGKTEL KA+A +FD+++ M+ IDMSE+ + +++L+GA GYVGY Sbjct: 581 PVGSFLLLGPTGVGKTELAKAVAMELFDNEKDMLVIDMSEYGNEMGITKLIGANAGYVGY 640 Query: 657 EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 716 +GG LTE ++ RPY+VILLDEV+ AH V N L Q+LD+GR+TDG+G VDFRN VVIM Sbjct: 641 NQGGTLTEPIKGRPYNVILLDEVDLAHQTVLNTLYQLLDEGRVTDGKGAVVDFRNCVVIM 700 Query: 717 TSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQ 776 TSNLG ++I GEL+ K++ V++ P F+NRIDEV+ F+ L +++ I + Sbjct: 701 TSNLGQEIIMRSRGELNDDERKKIEEIVLNRFGAP-FVNRIDEVLYFNNLDRENMHRILE 759 Query: 777 IQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQIL 834 Q+ L K+L RG +SD + + +YGAR L+R I+ + L + +L Sbjct: 760 YQMGYLEKKLRGRGITFKVSDAVKEDMVTKVLSSIYGARQLRRFIRSSFKRALTKVLL 817 >UniRef50_B6R3N5 Type VI secretion ATPase, ClpV1 family n=4 Tax=Proteobacteria RepID=B6R3N5_9RHOB Length = 901 Score = 689 bits (1778), Expect = 0.0, Method: Composition-based stats. Identities = 308/875 (35%), Positives = 481/875 (54%), Gaps = 40/875 (4%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 ++RL + A+ +A SL + + +Q + H + +L +Q L+ S ++ L Sbjct: 10 IERLNPCCRQAVEEAASLCVSNSHQEVTIEHFLISLASQPAVDFRLLIQSQNVDVDVLNE 69 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQ-KRGDNFISSELFVLAALESRGT 121 NR +VE S L +L +A ++G + S ++A L RG Sbjct: 70 AFRATFNRYRRVEADRT-PTFSPLLQDLLQDAWLIASVEQGKKTVRSGAVLIALLNDRGR 128 Query: 122 LAD--------------ILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTID 167 +L+ TA + + G + L KY + Sbjct: 129 YMQMDYYPLLERVSSDTLLRQFDELTAGSFEKDHRAGQGAGGAASAGDTAEGFLHKYGTN 188 Query: 168 LTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGE 227 T+ A+ GK+DP+ RD EIR+ I++L RR KNNP+ +GE GVGKTA+ EGLA RI NGE Sbjct: 189 FTQLAKDGKIDPIFCRDNEIRQIIEILCRRRKNNPICVGEAGVGKTALAEGLALRIANGE 248 Query: 228 VPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAG 287 VPE + LD+GAL AGA +GEFE+RLKGV++++ +ILFIDE HT++GAG Sbjct: 249 VPEDFANVALWGLDVGALQAGASMKGEFEKRLKGVIDEVRSSAEPIILFIDEAHTLIGAG 308 Query: 288 KADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTI 347 G DA N+LKPALARGEL + ATT EY++Y EKD AL RRFQ V + EP++++ I Sbjct: 309 GDQGGSDAANLLKPALARGELKTIAATTWTEYKKYFEKDPALTRRFQLVKLDEPTIDEAI 368 Query: 348 AILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDS 407 I+RGLK+ YE H V IT+ AI A+ L+ RYI RQLPDKAID++D A + +R ++ Sbjct: 369 IIMRGLKKAYEEAHGVYITEEAIGASVRLAARYITGRQLPDKAIDVLDTACARVRAGANT 428 Query: 408 KPEELDRLDRRIIQLKLEQQALMKES-----DEASKKRLDMLNEELSDKERQYSELEEEW 462 P EL +++ + L E++ L ++ + +RL + ++++D E + EL Sbjct: 429 PPVELQDVEQSLQTLSWEREGLERDQLTAPLEPEQLERLKAIADQINDLEERKQELSSRL 488 Query: 463 KAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGK 522 +A+ A + +L Q + ++ E + L + A E Sbjct: 489 EAQVALAENFIAAREDLFQKQPETQE-----------EDALEQDRALLVSHKNALIEEAG 537 Query: 523 TMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSN 582 + L+ +V AEIA +++ WTGIPV+ M++ + +LL + + + + GQ+ A+DA+ Sbjct: 538 SEPLISVEVGSAEIAAIISDWTGIPVNSMVQDDYHRLLTLAETMKKAIKGQDHAIDAIEA 597 Query: 583 AIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHS 642 +R SR L +P+G F GP+GVGKTE ++ +F +E + I+MSE+ E+H+ Sbjct: 598 RLRASRLDLHKKGQPLGVFFLAGPSGVGKTETALEVSRRLFGGEEFITTINMSEYQERHT 657 Query: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702 VSRL+G+PPGYVGY EGG LTEA+R++PYSV+LLDEVEKA P+V N+ Q D G L DG Sbjct: 658 VSRLIGSPPGYVGYGEGGVLTEAIRKKPYSVVLLDEVEKADPNVLNLFYQAFDKGELADG 717 Query: 703 QGRTVDFRNTVVIMTSNLGSDLIQERFGELD------YAHMKELVLGVVSHNFRPEFINR 756 +GR +D RN V +TSNLGSD I+ + + M + + + + +F+P + R Sbjct: 718 EGRLIDCRNVVFFLTSNLGSDQIENWVANAEDDQVPSHGSMLKSLTPLFAQHFKPALLAR 777 Query: 757 IDEVVVFHPLGEQHIASIAQIQLKRLYKRLEE-RGYEIHISDEALKLLSENGYDPVYGAR 815 + E +V+ PL E+ +A I Q++L L + L+E + + I++ +++ GAR Sbjct: 778 M-EPLVYMPLSEEVLADIVQMRLDDLIELLKETQKIALTITEATYGRVTQMCRVASNGAR 836 Query: 816 PLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNE 850 + + IQ+Q+ L+ +IL + + ++ Sbjct: 837 LVDQVIQRQLLPTLSIEILEAGHRGEHIASITIDS 871 >UniRef50_D1TDQ5 Type VI secretion ATPase n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TDQ5_9BURK Length = 910 Score = 687 bits (1774), Expect = 0.0, Method: Composition-based stats. Identities = 319/882 (36%), Positives = 472/882 (53%), Gaps = 60/882 (6%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 L RL + +LA+ A L + + ++ HL+ LL + + +L + L Sbjct: 9 LSRLNPECKLAMEQAAQLCVRQTHYNVDVEHLLLTLLESDAPDLKAILAHFAVKPETLSA 68 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQ-KRGDNFISSELFVLAALESRGT 121 + + ++ + G G S + + L+ G+ I S VLA LE Sbjct: 69 QLQKTVDGFKR--GNGRTPALSPNFSPLFQEAWLLSSMLLGEQQIRSGTLVLALLEVDTL 126 Query: 122 LADILKAAGATTANITQAI----------------------------------------- 140 +L++A A A+ Sbjct: 127 RGMLLESAPALLNFPRAALRDRLAAILAGSSEDAGGSHMPGQDSEAAQPGAASASASSAA 186 Query: 141 -EQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTK 199 E G ++ AL+ YT+D+T A +GK+DP+ GRD EIR+ I VL RR + Sbjct: 187 RETGAMPNIAGGAGGSGRKSALELYTVDMTGLAREGKIDPIRGRDAEIRQLIDVLLRRRQ 246 Query: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259 NNP+L GE GVGKTA+VEG AQRI+ G+VP L V +LD+ L AGA +GEFE RL Sbjct: 247 NNPILTGEAGVGKTAVVEGFAQRIVQGDVPPALVNVSVRSLDLALLQAGAGVKGEFENRL 306 Query: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319 K V+ ++ VILFIDE H ++GAG ++G DA N+LKPALARGEL + ATT EY Sbjct: 307 KSVIAEVKASPVPVILFIDEAHQLIGAGGSEGQGDAANLLKPALARGELRTIAATTWAEY 366 Query: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379 ++Y+E+D AL RRFQ V V EPS I +LRG+ ++ E HH V+I D A+ A LSHR Sbjct: 367 KKYVERDPALARRFQVVKVEEPSEAVAIDMLRGMVQKLEEHHGVEILDDAVRDAVKLSHR 426 Query: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439 YI+ RQLPDKAI ++D A + + + PEE++ L R I + + + L E+ + + Sbjct: 427 YISGRQLPDKAISVLDTACARVAIGQSGTPEEIEALGRTIEAAERQLRILRHEAATGADR 486 Query: 440 RL--DMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLAR 497 + ++L D Q S L ++ EK ++ + ++ + A D A Sbjct: 487 ADAIAVTTKQLDDARAQRSRLTDKLATEKRAVEEILAWRKKIRGYLSDPDSAADGEDAAS 546 Query: 498 MSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESERE 557 ++ + LEK LEA E ++ V +A+V++ WTGIPV RM+ E Sbjct: 547 LA----VNLSRLEKGLEAMQNDE----PMVPVCVDSETVAQVISGWTGIPVGRMLADELH 598 Query: 558 KLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKA 617 +L ++ +L RV+GQ+EA+DA++ +R RA L DP +P+G FL +GP+GVGKTE A Sbjct: 599 TVLYLQDKLAERVVGQDEALDAIARRVRTFRADLDDPGKPVGVFLLVGPSGVGKTETACA 658 Query: 618 LANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLD 677 LA+ ++ + M+ ++MSEF E HSVS L GAPPGYVGY GG LTEAVRRRPYSV+LLD Sbjct: 659 LADMLYGGERNMITVNMSEFQEAHSVSGLKGAPPGYVGYGRGGVLTEAVRRRPYSVVLLD 718 Query: 678 EVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGE---LDY 734 E+EKAHPDV + QV D G + DG+G +DF+NT++++TSN D+I E Sbjct: 719 EMEKAHPDVLELFFQVFDKGVMEDGEGVPIDFKNTLILLTSNAAQDVITEASRGGRRPPP 778 Query: 735 AHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYE-I 793 + E + + F P F+ R+ V +H LG+ I +I ++L+RL +R E + + Sbjct: 779 DELIEKLRPALLRQFSPAFLGRLVLVPYYH-LGDAQINAIVNLKLERLAQRFERNHHAGL 837 Query: 794 HISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILS 835 D+ L+++ + GAR + + Q + LA+Q+L Sbjct: 838 TWDDDVATLIAQRCKEVDSGARNVDHILTQSVLPELARQVLE 879 >UniRef50_Q030Z1 ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones n=5 Tax=Lactococcus lactis RepID=Q030Z1_LACLS Length = 816 Score = 686 bits (1771), Expect = 0.0, Method: Composition-based stats. Identities = 347/884 (39%), Positives = 511/884 (57%), Gaps = 97/884 (10%) Query: 1 MRLD--RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAG 58 M+ + + T A A + IE HL++A+ G +L +++ Sbjct: 1 MKFENVKYTPTLDRIFEKAAEDAHQYQYGTIESAHLLAAMATTSGSIAYSILAGMNVDSS 60 Query: 59 QLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALE- 117 L D+ V+ +++ S V+ + LA + +E + A L+ Sbjct: 61 DLLIDLEDL---SSHVKVKRSELRFSPRAEEVVTVASFLAVHNNAEAVGTEHLLYALLQV 117 Query: 118 SRGTLADILKAAGATTANITQAIEQMRGGESVNDQGA---------------EDQRQALK 162 G +LK ++ + IE+ G + ++ A L Sbjct: 118 EDGFGIQLLKLQKINIVSLRKEIEKRTGLKVPENKKAVTPMSKRKMAKGVAENSSTPTLD 177 Query: 163 KYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQR 222 + DLTE A GKLDP+IGR+ E+ R I +L RRTKNNPVL+GEPGVGK+AI+EGLAQR Sbjct: 178 SVSSDLTEAARSGKLDPMIGREAEVDRLIHILSRRTKNNPVLVGEPGVGKSAIIEGLAQR 237 Query: 223 IINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHT 282 I+NG+VP GL R++AL+M +VAG K+RGEFE+RL ++ +++ + +VI+FIDELHT Sbjct: 238 IVNGQVPIGLMNSRIMALNMATVVAGTKFRGEFEDRLTAIVEEVS-ADPDVIIFIDELHT 296 Query: 283 MVGAGKA-DGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEP 341 ++GAG D DA N+LKPALARG+ VGATT EY++YIEKD ALERR ++ V EP Sbjct: 297 IIGAGGGMDSVNDAANILKPALARGDFQMVGATTYHEYQKYIEKDEALERRLARINVDEP 356 Query: 342 SVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSI 401 S ++ IAIL+GL+E++E +H V+ T D+AI + Sbjct: 357 SPDEAIAILQGLREKFEDYHQVKFT---------------------DQAIKSAVTLSVRY 395 Query: 402 RMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEE 461 + +D LD E A +K S + + + L ++L + + +E + Sbjct: 396 MTSRKLPDKAIDLLD--------EAAAAVKISVKNQETKRLELEKDLVKAQEELAEAVIK 447 Query: 462 WKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEG 521 + S ++ + ++ ++ + E Sbjct: 448 LDV--------------------------------KASRIKEKAVEKISDKIYKFSIKEE 475 Query: 522 KTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVS 581 K R +VTD + V + TG+P+++M +SE ++L+ +E+ELH RV+GQ EA+ AVS Sbjct: 476 K-----RQEVTDQAVIAVASTLTGVPITQMTKSESDRLINLEKELHKRVVGQEEAISAVS 530 Query: 582 NAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKH 641 AIRR+R+G+AD RP+GSF+FLGPTGVGKTEL KALA+ +F S++ M+R+DMSEFMEKH Sbjct: 531 RAIRRARSGVADSRRPMGSFMFLGPTGVGKTELAKALADSVFGSEDNMIRVDMSEFMEKH 590 Query: 642 SVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTD 701 S SRL+GAPPGYVGY+EGG LTE VR +PYSV+LLDEVEKAHPDVFNI+LQ+LDDG +TD Sbjct: 591 STSRLIGAPPGYVGYDEGGQLTERVRNKPYSVVLLDEVEKAHPDVFNIMLQILDDGFVTD 650 Query: 702 GQGRTVDFRNTVVIMTSNLGSDLIQERFG--------ELDYAHMKELVLGVVSHNFRPEF 753 +GR VDFRNT++IMTSNLG+ +++ DY+ M+ +L + ++RPEF Sbjct: 651 TKGRKVDFRNTIIIMTSNLGATALRDDKTVGFGAKNITADYSAMQSRILEELKRHYRPEF 710 Query: 754 INRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYG 813 +NRIDE +VFH L Q I I +I K L KRL E+ + ++ A+KL++E G+DP YG Sbjct: 711 LNRIDENIVFHSLESQEIEQIVKIMSKSLIKRLAEQDIHVKLTPSAIKLIAEVGFDPEYG 770 Query: 814 ARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857 ARPL++A+Q+++E+ L++Q+LSGE+ G I + + +I Q Sbjct: 771 ARPLRKALQKEVEDLLSEQLLSGEIKAGNHISIGASNKKIKIAQ 814 >UniRef50_C1GY73 Chaperone protein clpB n=1 Tax=Paracoccidioides brasiliensis Pb01 RepID=C1GY73_PARBA Length = 732 Score = 686 bits (1770), Expect = 0.0, Method: Composition-based stats. Identities = 340/719 (47%), Positives = 467/719 (64%), Gaps = 72/719 (10%) Query: 142 QMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNN 201 GG + G E ++ AL++Y +DLT RA+ GKLDPVIGRD EI+RTIQ+L RRTKNN Sbjct: 67 HPPGGTHRMNMGGEPEKSALEEYGVDLTARAKDGKLDPVIGRDGEIQRTIQILSRRTKNN 126 Query: 202 PVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKG 261 PVLIG G GKTAI+EGLAQRI+ G+VPE +K +RV++LD+G L+AGAK+RG+FEERLK Sbjct: 127 PVLIGSAGTGKTAILEGLAQRIVRGDVPESVKNKRVISLDLGQLIAGAKFRGDFEERLKK 186 Query: 262 VLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQ 321 VL ++ + +G VILF+DELHT++G GKA+G++DA N+LKPAL+RGEL C GATTL+EYRQ Sbjct: 187 VLKEVEEAQGGVILFVDELHTLLGLGKAEGSIDASNLLKPALSRGELQCCGATTLNEYRQ 246 Query: 322 YIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYI 381 IEKD AL RRFQ + V EPS Sbjct: 247 -IEKDVALARRFQPIVVEEPSESK------------------------------------ 269 Query: 382 ADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRL 441 PD AI +D +I++ E ++L KE+D SK+R Sbjct: 270 -----PD-AIQELDRQIMTIQI---------------------ELESLRKETDIPSKERR 302 Query: 442 DMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSEL 501 + L E L K+ + E + W+ EKA L + K +LE+A++ +EQA+R G+ A+ SEL Sbjct: 303 EKLEELLKTKQDEVKEFTDVWEKEKAELDAIKQAKEDLERARVDLEQAQREGNFAKASEL 362 Query: 502 QYGKIPELEKQL-----EAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESER 556 +Y IP+LE +L + AT + LL + VT +IA V++R TGIPV+++M E Sbjct: 363 RYSIIPKLENKLPKEGSDTATSTTADGVVLLHDSVTSDDIAGVVSRTTGIPVNKLMAGEV 422 Query: 557 EKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCK 616 EKL+ ME L V GQ+EA+ AV+NA+R RAGL+ NRP+ SF+FLGPTGVGKTELCK Sbjct: 423 EKLIHMEDTLRQSVRGQDEALCAVANAVRMQRAGLSGENRPLASFMFLGPTGVGKTELCK 482 Query: 617 ALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILL 676 +A F+F ++ A++R DMSEF EKH+VSRL+G+P GYVGYE+ G LTEAVRR+PY+V+L Sbjct: 483 KMAGFLFSTESAVLRFDMSEFQEKHTVSRLIGSPAGYVGYEDAGQLTEAVRRKPYAVLLF 542 Query: 677 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLI---QERFGELD 733 DE EKAH D+ +LLQVLD+G LTD QG +DFRNT++++TSNLG++++ GE Sbjct: 543 DEFEKAHRDISALLLQVLDEGFLTDAQGHKIDFRNTLIVLTSNLGAEILVGSDPTLGEEV 602 Query: 734 YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 793 +K V+ V ++ PEF+NRIDE ++F L + + I I+L+ L RL++R + Sbjct: 603 STEIKSAVMATVQTSYPPEFLNRIDEFIIFKRLSRKALRDIVDIRLRELQLRLDDRRITL 662 Query: 794 HISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDR 852 + D L + GYDP YGARPL R I ++I N LA +I+ G++ G+V + +N D+ Sbjct: 663 KVDDGVKGWLCDKGYDPRYGARPLNRLIAKEIGNRLADKIIRGQVTTGQVAHVTLNADK 721 >UniRef50_B8EIH7 Type VI secretion ATPase, ClpV1 family n=56 Tax=Proteobacteria RepID=B8EIH7_METSB Length = 904 Score = 686 bits (1769), Expect = 0.0, Method: Composition-based stats. Identities = 322/882 (36%), Positives = 483/882 (54%), Gaps = 53/882 (6%) Query: 5 RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDI 64 +L A A G N+ +E H ++ ++ +E ++ ++ +L +DI Sbjct: 12 KLNRIGYETFIQALRQAKGAGNRNVELAHWLAHIMQKERSDLALTADHFKLDRAKLASDI 71 Query: 65 NQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKR-GDNFISSELFVLAALESRGTLA 123 + ++ + E V S LV +L+ A G+ I + + AL+S Sbjct: 72 ARTIDGFRRNETEMPGV--SNTLVDLLDRGWHYATLFFGETQIRTGHVLAGALKSLELRR 129 Query: 124 D---------------ILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQA-------- 160 + + A + Q G ++ G QA Sbjct: 130 AFTSISPEFAKIPGDALTNEYRSLWAGSDEENLQPMDGSGLSAAGTPGAEQAQGAKGTTA 189 Query: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220 L +++ DLT RA G++DPV+GRD+EIR+ I VL RR +NNP+L GE GVGKTAIVEGLA Sbjct: 190 LDRFSQDLTARAATGEMDPVLGRDDEIRQIIDVLMRRRQNNPILTGEAGVGKTAIVEGLA 249 Query: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280 QRI +VP L+G R+LALD+ + AGA +GEFE+RL+ V++++ +ILFIDE Sbjct: 250 QRIAASDVPPALRGVRLLALDITLMQAGASMKGEFEQRLRSVIDEVQASPKPIILFIDEA 309 Query: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340 HT++GAG A G DA N+LKPALARG L + ATT EYRQY EKD AL RRFQ V V E Sbjct: 310 HTLIGAGGAAGTGDAANILKPALARGTLRTIAATTWAEYRQYFEKDPALTRRFQPVQVDE 369 Query: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400 P V +LRG+ E HH V+I+D AIVAA LSHRYI R LPDKA+ L+D + Sbjct: 370 PDVARCCVMLRGVLAPMEKHHKVRISDAAIVAAVNLSHRYIPARLLPDKAVSLLDTTCAR 429 Query: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESD--EASKKRLDMLNEELSDKERQYSEL 458 + + ++ P ++ L+ E+ AL ++D + ++R+ ++ EL++ + + + L Sbjct: 430 VAISQNATPAAVEDARVAANALEAEKAALTTDADLGDLDEERIGEIDAELAELKEKSAAL 489 Query: 459 EEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQ 518 EEEW E+A + ++ E+ + EQ +RV +++ L G PE Sbjct: 490 EEEWAKERALIEEIVKLRREISENPADAEQ-KRVALRDKIASL-GGVDPE---------- 537 Query: 519 LEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVD 578 R++ V D +A V++ WTGIPV RM++ E E +LR+ + L+ RV+GQ+ + Sbjct: 538 -----KRMIYAHVDDQSVAAVVSDWTGIPVGRMVKDEIENVLRLPEILNRRVVGQSHGLA 592 Query: 579 AVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFM 638 ++ I +RAGL +P++PIG F+ GP+GVGKTE ALA ++ ++ ++ I+MSEF Sbjct: 593 MIAKRIETNRAGLDNPSKPIGVFMLCGPSGVGKTETALALAEALYGGEQNIITINMSEFQ 652 Query: 639 EKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGR 698 E H+VS L GAPPGYVGY EGG LTEAVRR+PYSV+LLDE+EKAHPDV + QV D G Sbjct: 653 EAHTVSGLKGAPPGYVGYGEGGRLTEAVRRKPYSVVLLDEIEKAHPDVHELFFQVFDKGV 712 Query: 699 LTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVS----HNFRPEFI 754 + DG GR +DF+NT++I+TSN+G+D I R + +A E + + F P + Sbjct: 713 MEDGTGRRIDFKNTLIILTSNVGTDTIMRRAEDPAFAGDAEALAAELRPDLLQVFPPALL 772 Query: 755 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLE-ERGYEIHISDEALKLLSENGYDPVYG 813 R+ + + PL +A I ++QL R+ KR+ + + D + + DP G Sbjct: 773 GRL-VTIPYLPLSPSMLAGIVRLQLGRIGKRIRAAQDADFSYDDAVVDHIVSLCNDPDSG 831 Query: 814 ARPLKRAIQQQIENPLAQQILSGEL--VPGKVIRLEVNEDRI 853 R + I + L+++ L L K R+ + + Sbjct: 832 GRIIDNIINNTLLPALSREFLKRTLAKQELKEARVAMKDGAF 873 >UniRef50_A8I1M5 ClpD chaperone, Hsp100 family n=1 Tax=Chlamydomonas reinhardtii RepID=A8I1M5_CHLRE Length = 997 Score = 685 bits (1767), Expect = 0.0, Method: Composition-based stats. Identities = 340/896 (37%), Positives = 489/896 (54%), Gaps = 96/896 (10%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +R T + + AQ+ A + + H++ L+ +E S + L S G+++ + + Sbjct: 75 FERFTERSIKTVMIAQAEAKAFGHTEVNTEHILLGLVAEESLSKNGYLNS-GVSSERAKA 133 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL-ESRGT 121 + R V G + S+++ ++ ++ N+IS E +LA L Sbjct: 134 AVEALFGRKRPVSH-GESIPFSREVRKMFENATHECKRSNVNWISPEHILLAMLSMPDCN 192 Query: 122 LADILKAAGATTANITQAIEQMRGGES--------VNDQGAEDQRQALKKYTIDLTERAE 173 +L + A + + G++ E + ++Y DL Sbjct: 193 GKRVLHSLSADVEGLKAEAGKRLKGDTDAEQAKKKQGAAAKEQGPKMTEEYCKDLCAEVR 252 Query: 174 QGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGE---VPE 230 G++DPV+GRD E+ R Q+L RRTKNNP+L+GEPGVGKTAI EGLA I++ +PE Sbjct: 253 AGRIDPVVGRDREVGRVCQILARRTKNNPILLGEPGVGKTAIAEGLAAAIVHRAASPLPE 312 Query: 231 GLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKAD 290 L +R+L LD+G L+AGAK RGE E R+ ++ ++ + GN+IL IDE+HT+VGAG Sbjct: 313 FLHSKRILQLDVGLLIAGAKERGELESRVTKLIAEIREA-GNIILMIDEIHTLVGAGSVG 371 Query: 291 GA----MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDT 346 +D N++KPALARGE +GATTLDE+R+YIE+DAALERRFQ V V EP+ E T Sbjct: 372 RGGGGGLDIANLVKPALARGEFQVIGATTLDEHRKYIERDAALERRFQPVTVDEPTPEAT 431 Query: 347 IAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQID 406 + IL+GLKERYE HH T+ A+ AA LSH+YIADR LPDKAIDLIDEA S R+ Sbjct: 432 LTILQGLKERYERHHRCAYTEEALAAAVALSHKYIADRFLPDKAIDLIDEAGSRARIAAY 491 Query: 407 SKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEK 466 + RQ ++ Sbjct: 492 TA--------------------------------------------RQNQARAGAGGRQQ 507 Query: 467 ASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMR- 525 +L + E+A + G +P Q++ +L G + Sbjct: 508 QLTMAPGGAGGDLSRGNQKQEEACINAN--------PGVLPACLPQVDYRAELAGPSCEG 559 Query: 526 LLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIR 585 + V +I ++A WT IPV RM + E+E+LL M L V+GQ +AV+A+S A+ Sbjct: 560 SVLPVVGVEDIEAIVAAWTSIPVERMSDGEKERLLNMRHTLASHVVGQADAVEAISTALC 619 Query: 586 RSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSR 645 R+R GL P RP+ + LF+GPTGVGKTEL K L+ + S EA++R+DMSE+ME+HSVS+ Sbjct: 620 RARCGLNLPRRPVAALLFVGPTGVGKTELAKVLSEQYYGSREALLRLDMSEYMERHSVSK 679 Query: 646 LVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGR 705 LVGAPPGYVG+ +GG LTEA+RRRP+SV+L DE+EKAHPDVF+ILLQ+L+DGRLTD QGR Sbjct: 680 LVGAPPGYVGFGDGGKLTEAIRRRPFSVVLFDEIEKAHPDVFSILLQILEDGRLTDSQGR 739 Query: 706 TVDFRNTVVIMTSNLGSDLI------------------------QERFGELDYAHMKELV 741 V F+N ++I+TSN+GS LI E+ +K+ V Sbjct: 740 VVSFKNAMIILTSNVGSRLIAAAGNAARNGAGVFSRPGMGAGPTDEKLQAAQAFKLKQEV 799 Query: 742 LGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALK 801 LG V F PE +NR DE VVF L + +A IAQ+ L + R ERG + I+ ++ Sbjct: 800 LGEVRGFFAPELLNRFDETVVFQRLRREDVAHIAQLLLAQTIARAGERGLGLRIAPALME 859 Query: 802 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857 + G+ YGARPL++AI + +++PL+ +L + G + L +N D V V+ Sbjct: 860 HIVAEGHSDEYGARPLRQAIVRLVDDPLSDAVLHRKFGAGVALVLGLNSDGAVTVR 915 >UniRef50_Q4AAM9 ATP-dependent protease binding protein n=7 Tax=Mycoplasma RepID=Q4AAM9_MYCHJ Length = 692 Score = 684 bits (1765), Expect = 0.0, Method: Composition-based stats. Identities = 320/701 (45%), Positives = 483/701 (68%), Gaps = 17/701 (2%) Query: 154 AEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKT 213 + + + L+KY +LT+ A++ K++PVIGRD+EIRR I++L R+TKNNPVL+G+PGVGKT Sbjct: 1 MKQKLENLEKYARNLTKLAKENKIEPVIGRDDEIRRIIKILSRKTKNNPVLVGDPGVGKT 60 Query: 214 AIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNV 273 AIVEG+A +II +VP+ LK +++ LD+ ++AGA ++GEFE+R+K +L ++ + V Sbjct: 61 AIVEGMALKIIANQVPDNLKNKQIFELDLTLILAGASFKGEFEKRIKAILQEIEQNSDQV 120 Query: 274 ILFIDELHTMVGAGKADG-AMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERR 332 I+FIDE+H ++G G + +MD N+LKP +ARG++ +GATT EYR YIEKD ALERR Sbjct: 121 IIFIDEIHLLIGTGSSGTDSMDFANILKPIMARGQIKLIGATTNSEYRLYIEKDGALERR 180 Query: 333 FQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAID 392 QKV + EPSV DTI ILRG+KER E H V+I D A+V A ++RYI DR LPDKAID Sbjct: 181 MQKVEILEPSVIDTINILRGIKERLENFHQVKIKDSALVFATKAANRYIFDRFLPDKAID 240 Query: 393 LIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKE 452 L+DEAA+S++++I+ +PE+L++ R +I LK+E+ + K+ L ++ + E Sbjct: 241 LVDEAAASLKVEINYQPEKLEKAKRELIYLKMEE-------INSQKQDNSELKSKIENLE 293 Query: 453 RQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQ 512 + +L+++W K S S ++ ELE+ K GD + +E++YGKIP++ K+ Sbjct: 294 NEVKKLQDQWDQSKKSASEIASLSQELEKLKYQQNYLMEQGDYQKAAEIKYGKIPKISKK 353 Query: 513 LEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIG 572 L + + N + +++IA+V++ WT IP+ +++ESE +K L +E+ L + G Sbjct: 354 LGEIKARRQE----ISNVLDESQIAKVVSNWTKIPIEKLLESEIQKYLNLEKNLAKSLKG 409 Query: 573 QNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRI 632 QN+A+ AVS+AI R +A + D +RPI SF F+GPTGVGKTEL +ALA +F++ ++R+ Sbjct: 410 QNQAIKAVSDAILRFKAKINDESRPISSFFFMGPTGVGKTELARALALNLFNNKNQIIRL 469 Query: 633 DMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQ 692 DMSE+MEKHSVS+L+GAPPGY+G+E+GG LT VR PYS+ILLDE+EKAHP+V NI LQ Sbjct: 470 DMSEYMEKHSVSKLIGAPPGYIGFEQGGNLTNKVRLNPYSIILLDEIEKAHPEVINIFLQ 529 Query: 693 VLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPE 752 +LD+G + D + + V+FRNT++IMTSN+G++ I E + KE + +PE Sbjct: 530 ILDNGEIVDSKSQKVNFRNTIIIMTSNIGANKILEGKKMNEIEAKKE-----LLRYLKPE 584 Query: 753 FINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVY 812 F+NRIDE++VF+PL I I +++LK L RL+E +EI + E GYD + Sbjct: 585 FLNRIDEIIVFNPLNYDIIFEIIELELKDLQNRLKENNFEIEFEKSVKNWILEFGYDKNF 644 Query: 813 GARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRI 853 GARP+KR I+++IEN +A++I++ E++ K L D++ Sbjct: 645 GARPIKRFIKKEIENFVAKKIVAEEILKDKKYNLSFKNDKL 685 >UniRef50_Q9F746 Chaperone protein clpB n=100 Tax=Proteobacteria RepID=CLPB_YEREN Length = 890 Score = 684 bits (1765), Expect = 0.0, Method: Composition-based stats. Identities = 311/886 (35%), Positives = 474/886 (53%), Gaps = 46/886 (5%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +L + A ++ N ++E +H ++ L +QE + ++ ++ Sbjct: 9 FGKLDATLFKGIESATTICKLRGNPYVELIHWLNQLWHQEDNDLKHIVRYFAVDVDAFER 68 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRG-DNFISSELFVLAALESRGT 121 + QAL RLP + D S + + A D I S +LA L + Sbjct: 69 GLAQALARLPVGATSISD--FSYHIELAIERAWVYASLECLDTRIRSGHLLLAMLTNMEL 126 Query: 122 LADIL-----------KAAGATTANITQAIEQMRGGESVNDQGAEDQRQ----------- 159 +L + + ITQA + + + Sbjct: 127 RRALLAIAPEMEKIPLEHLSSDFNFITQASPETNEAATDGSPMYDGTLPGEASNAINGKS 186 Query: 160 --ALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVE 217 L +YT DLT A +GK+DPV+GR+ EI + +L RR +NNP+L GE GVGKTA+VE Sbjct: 187 TATLAQYTTDLTALAREGKIDPVLGRNHEISTMVDILLRRRQNNPLLTGEAGVGKTAVVE 246 Query: 218 GLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFI 277 GLA I+ GE+P L +L LD+ AL AGA +GEFE RLK VL++ VILFI Sbjct: 247 GLALAIVAGEMPPALSQVSLLTLDVVALSAGASMKGEFEARLKNVLDEAMASPTPVILFI 306 Query: 278 DELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVF 337 DE+HT+VGAG G DA N+LKPALARG+L +GATT E++++IEKD AL RRFQ + Sbjct: 307 DEVHTLVGAGGNAGTGDAANLLKPALARGQLRTIGATTWSEFKRHIEKDPALTRRFQVLQ 366 Query: 338 VAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEA 397 V EP + I++LRGL E HH V I D A+ AA LSHRYI RQLPDKAI L+D A Sbjct: 367 VDEPDEDTAISMLRGLTPALEKHHGVWIMDEALQAAVRLSHRYIPARQLPDKAISLLDTA 426 Query: 398 ASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESD--EASKKRLDMLNEELSDKERQY 455 + + + S+P EL +L + + E +L K + +R +L ++ Sbjct: 427 CARVAVAQFSQPAELQQLTFQSETAQTELSSLEKAQHFGKGQDERTALLEATIAQHSAAA 486 Query: 456 SELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEA 515 ++LE+ W+AE+ ++ + L + E + + + QLE Sbjct: 487 NKLEQRWQAERELVTAITATRTVLYELVSQ----------PTPDEEKRQQYQQQLAQLEE 536 Query: 516 ATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNE 575 L L++ +V IA ++A WTGI V +M++ + ++ + Q L RVIGQ Sbjct: 537 QLLLIRSAQPLVQAEVNATVIANIVADWTGIQVGQMLKDDIRAVMELPQRLEERVIGQPH 596 Query: 576 AVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMS 635 A+ +S I +RAG+ADP +P+G F+ +GP+GVGKTE A+A M+ ++ ++ I+MS Sbjct: 597 ALVQLSENIMTARAGMADPRKPLGVFMLVGPSGVGKTETALAIAESMYGGEQNLITINMS 656 Query: 636 EFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLD 695 E+ E H+VS L G+PPGYVGY EGG LTEAVRR+PYSV+LLDE+EKAH DV + QV D Sbjct: 657 EYQESHTVSSLKGSPPGYVGYGEGGVLTEAVRRKPYSVVLLDEIEKAHSDVHELFFQVFD 716 Query: 696 DGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVS----HNFRP 751 G++ DG+GR +DF+NT++++TSN+GS+L+ F + D A ++ +L + F Sbjct: 717 KGQMEDGEGRFIDFKNTILLLTSNVGSELLSNLFADPDTAPDQDGILSALQPELLKVFPA 776 Query: 752 EFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERG-YEIHISDEALKLLSENGYDP 810 F+ R+ V+ + PL + + I ++ L R+ +RL+ + + SD + + Sbjct: 777 AFLGRVT-VIPYLPLQQSALQHIVRLHLDRIGQRLQSQHQLTLQYSDVVVDDVVSRCSVA 835 Query: 811 VYGARPLKRAIQQQIENPLAQQIL-SGELVPGKVIRLEVNEDRIVA 855 GAR L R I+Q I + + IL + +P +++ ++ E++ Sbjct: 836 ETGARMLIRYIEQNITPEIGKFILRDHDAIPNQIVFVDKVENKFTV 881 >UniRef50_Q3LW37 ATP binding subunit of Clp protease n=1 Tax=Bigelowiella natans RepID=Q3LW37_BIGNA Length = 897 Score = 684 bits (1765), Expect = 0.0, Method: Composition-based stats. Identities = 328/890 (36%), Positives = 495/890 (55%), Gaps = 96/890 (10%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSA-LLNQEGGSVSPLLT-------S 52 + + + LA AQ A I ++ L+ + + +L Sbjct: 62 IDPSKFSEDLTNILALAQMEAAARSTFKITGPFILLGILMARGSTTGYAMLKTWKVNYLK 121 Query: 53 AGINAGQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFV 112 A I A ++R+D+ LP+ + R+L+ ++ A G I + V Sbjct: 122 ARIEADKIRSDLTNLFGELPETYS------FDDEAHRILDYAERYANFFGLVQIETIHVV 175 Query: 113 LAALE-SRGTLADILKAAGATTANITQAIEQMRGGESVNDQGA---------------ED 156 +A R I++ ++ + ++ +R S+ + Sbjct: 176 MAMFRYKRSNAYRIIETITPNFESLEEIVDNIRPNISLKRDSKGFIYQAQKSELPELDPE 235 Query: 157 QRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIV 216 + + +DLTE+AE G+ DPVIGR +EI R I+VL R++KNNP L+G+PGVGKTAI Sbjct: 236 SEDIIDTFGVDLTEKAEFGEGDPVIGRKKEIDRLIRVLARKSKNNPCLVGDPGVGKTAIA 295 Query: 217 EGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILF 276 EGLA RI N EVPE LK +R++ L++ +VAG+KYRG+FE R+ ++ ++A+ E +VILF Sbjct: 296 EGLAYRIWNDEVPEFLKNKRIINLELTKIVAGSKYRGDFESRILSII-EMARFEDSVILF 354 Query: 277 IDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKV 336 IDE+HT++GAG ++G +DA NMLKP L+RGE+ +GATT +E+R+YI+ D ALERRFQ V Sbjct: 355 IDEIHTIMGAGSSEGTLDAANMLKPPLSRGEISLIGATTEEEFRKYIKADGALERRFQAV 414 Query: 337 FVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDE 396 V EP++ + I IL G+K+ + +H V +D AI A S +YI+D+ LPDKAIDL+DE Sbjct: 415 KVPEPTISEAIQILHGIKKNFGNYHGVVYSDEAIEACVKFSKQYISDKFLPDKAIDLLDE 474 Query: 397 AASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYS 456 + + ++M+ + ++ I + ++A+++ D ++ + Sbjct: 475 SGAFVKMKEGYAIKNIEDYTFLIKSYRETKKAVVE-----------------KDIQKLKA 517 Query: 457 ELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAA 516 L E KA K Q IK E K I R Sbjct: 518 TLITEIKALKKVEQVLQKIKLSQEAIKRDINNIR-------------------------- 551 Query: 517 TQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEA 576 V ++ V+ TG+ + + +SE E LL +E LH VIGQ EA Sbjct: 552 -------------VVKVPDVETVIEEMTGVKIKEVSKSESENLLNLESILHKSVIGQEEA 598 Query: 577 VDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSE 636 V AVS A+R+SR GL DP RPI SF+F GPTGVGKTEL K L+ FDS++AM+R DMS+ Sbjct: 599 VTAVSKAMRKSRVGLRDPKRPIASFIFAGPTGVGKTELAKTLSRVYFDSEDAMIRFDMSD 658 Query: 637 FMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDD 696 F EKH+VS+L+G+PPGY+GY +GG LTEAVR+ P+S++L DE+EKAHPDV+ LLQVLDD Sbjct: 659 FAEKHNVSKLIGSPPGYIGYSDGGQLTEAVRKTPHSLVLFDELEKAHPDVYLPLLQVLDD 718 Query: 697 GRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFG---------ELDYAHMKELVLGVVSH 747 GRL D +G+ VDF+NT++I+TSNLG+ ++ R ++ + ++ Sbjct: 719 GRLADSKGKIVDFKNTIIILTSNLGAKEVEARRKAIKQSSETEDISEKESFSIYNAAIAE 778 Query: 748 NFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENG 807 FRPEF+NRIDE+++F L + + I I + + R + G I ++ +L++E G Sbjct: 779 YFRPEFLNRIDEIIIFKRLTQSQVYEIFAIFMNSVKHRAAKLGITIQETERLRQLVTEAG 838 Query: 808 YDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857 Y P +GARPLKR I + IE+PL++ ILS E+V G + L+ ++ ++ Sbjct: 839 YTPAFGARPLKRTISRLIESPLSEMILSNEVVSGDTVLLDYYNKKVTFIK 888 >UniRef50_A4RQJ1 Chaperone, Hsp100 family, ClpB-type n=2 Tax=Ostreococcus RepID=A4RQJ1_OSTLU Length = 807 Score = 683 bits (1763), Expect = 0.0, Method: Composition-based stats. Identities = 342/734 (46%), Positives = 503/734 (68%), Gaps = 33/734 (4%) Query: 151 DQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGV 210 +++ AL+++ D+T+ A +G LDP++GR+EE+RR I +L RRTKNNPVL+G+ GV Sbjct: 49 QNPEDEELSALERFCTDVTDEARRGLLDPLVGREEEVRRLIHILCRRTKNNPVLLGQSGV 108 Query: 211 GKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDL--AK 268 GKTAIVEGLAQRI+N +VP+ L+G ++L +D+GA+ AG + GEFEERL ++ ++ A Sbjct: 109 GKTAIVEGLAQRIVNDDVPQALRGAKLLEVDLGAVGAGCQMPGEFEERLTIIVQEVVDAT 168 Query: 269 QEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAA 328 +G V+LFID++H + A + + +LKPAL RG L CVGAT+ D++++ IE+DAA Sbjct: 169 AKGPVVLFIDDIHNLCPAPPMNN--NGAAILKPALGRGLLRCVGATSADKFKKTIEQDAA 226 Query: 329 LERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPD 388 LERRFQ+V V EP+V+DT++ILRGL+ RYE HH++ I++ A++AAA LS RY++ RQLPD Sbjct: 227 LERRFQQVPVEEPNVDDTVSILRGLRPRYEQHHNIAISEGALLAAAQLSARYVSGRQLPD 286 Query: 389 KAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKES---------DEASKK 439 KAIDL+DEAA+++RM KP+ LD DR+I QL+ E+ L++++ + Sbjct: 287 KAIDLLDEAAAAVRMMKTHKPDGLDMADRKIAQLQKERDQLLRKNAGELAKAGTSNVAAA 346 Query: 440 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQT-------IKAELEQAKIAIEQARRV 492 L + LS +++ E++ ++ E+ + IK ++E AK+ I QA + Sbjct: 347 ELQKIAAALSVEKKARKEMQSKYDTERRIQDEYRRAYANNSFIKRKVENAKMKIAQATQA 406 Query: 493 GDLARMSELQYGKIPELEKQLEAATQLEGK-------------TMRLLRNKVTDAEIAEV 539 + ++ EL+K + E + ++R +VTD ++A V Sbjct: 407 EAGSVLAAELGRAQAELKKLEQQVKTTEDELTAAEAAVLELKDGGAMMREEVTDNDVAAV 466 Query: 540 LARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIG 599 ++RWTG+PV++++ SE+ KLL++E ELH RVIGQ AV +V+ A++RSRA LADPN P+ Sbjct: 467 VSRWTGVPVAKLVSSEKAKLLQLEAELHQRVIGQEAAVTSVAEAVQRSRADLADPNGPVA 526 Query: 600 SFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEG 659 SF+FLGPTGVGKTEL KALA+++F+SD A+VR+DMSE+MEKHSV+RL+GAPPGYVGY+EG Sbjct: 527 SFMFLGPTGVGKTELAKALASYLFNSDTALVRLDMSEYMEKHSVARLIGAPPGYVGYDEG 586 Query: 660 GYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSN 719 G LT+AVR++PYSV+L DE+EKAH DVFN+LLQ+LD+G +TD QGR V FRN ++IMTSN Sbjct: 587 GMLTDAVRQKPYSVVLFDEIEKAHVDVFNVLLQLLDEGHVTDTQGRNVSFRNCLIIMTSN 646 Query: 720 LGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQL 779 LGSD I + ++K+ V+ V +FRPEF+NR+DE +VF PL I I Q+Q Sbjct: 647 LGSDEISYANKRRNKVNVKDAVMQHVRSHFRPEFVNRLDEFIVFEPLTHAQIEEIVQLQT 706 Query: 780 KRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELV 839 K+L +R++ + + + A++ L+ GYDP YGARP++RAIQ+++ PLA +L G Sbjct: 707 KKLSQRIDTQRMNLSLDRSAIEHLARQGYDPAYGARPVRRAIQRELIQPLANAMLRGVFN 766 Query: 840 PGKVIRLEVNEDRI 853 I + + I Sbjct: 767 EDDTILVTADRQGI 780 >UniRef50_A7ZQR5 ClpA/ClpB family protein n=21 Tax=Proteobacteria RepID=A7ZQR5_ECO24 Length = 881 Score = 682 bits (1760), Expect = 0.0, Method: Composition-based stats. Identities = 340/889 (38%), Positives = 491/889 (55%), Gaps = 70/889 (7%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 L RL AL A SL + I H + LL Q G ++ + + L Sbjct: 10 LRRLNPYCARALDAAASLCQTRAHAEITIEHWLLKLLEQGEGDITVIARRYEWDIDTLWQ 69 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDN-FISSELFVLAALESRGT 121 + L+ LP+ Q S+ L ++ +A GD+ I S+ ++A E Sbjct: 70 SLLAHLDTLPR--SVRERPQLSEPLTALIRQAWLIASLEGDDPQIRSQHLLMALTEKPML 127 Query: 122 LA---------------DILK--------AAGATTANITQAIEQMRGGESVNDQGAEDQR 158 A + L+ A +T+ + + G + D A Sbjct: 128 PACNDLWVLLSLSRVQFERLRPLLDAQSDECPARQPQVTEPLTSAQPGVATTDAPANTLT 187 Query: 159 --------QALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGV 210 L ++T D+TE+A G++DPV GRD EIR+ + +L RR KNNP+L+GEPGV Sbjct: 188 GKQDDALLAVLNRFTEDVTEKARSGRIDPVFGRDTEIRQMVDILSRRRKNNPILVGEPGV 247 Query: 211 GKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQE 270 GKTA+VEGLA RI G VP+ LK + LD+G L AGA +GEFE+RLK V++ + K Sbjct: 248 GKTALVEGLALRIAEGNVPDSLKTVHIRTLDLGLLQAGAGVKGEFEQRLKNVIDAVQKSP 307 Query: 271 GNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALE 330 V+LFIDE HT++GAG G DA N+LKPALARGEL + ATT EY+QY E+DAALE Sbjct: 308 EPVLLFIDEAHTIIGAGNQAGGADAANLLKPALARGELRTIAATTWSEYKQYFERDAALE 367 Query: 331 RRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKA 390 RRFQ V V EP + +LRGLK RY HH V + D AI A LS RY+ RQLPDKA Sbjct: 368 RRFQMVKVDEPDDDTACLMLRGLKARYAQHHGVHMLDSAIQTAVRLSRRYLTGRQLPDKA 427 Query: 391 IDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKES---DEASKKRLDMLNEE 447 +DL+D A + +RM +D+ PE L +L R+ L +E++A+ ++S EAS +RL L + Sbjct: 428 VDLLDTAGARVRMSLDTLPEPLTQLHARLAALDIEREAIEQDSVFYPEASPERLAELIDL 487 Query: 448 LSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIP 507 + + + LE +++ EK T++ E + Sbjct: 488 RDELQAEAGHLETQYQQEKRLAQQIMTLRQEGTDST------------------------ 523 Query: 508 ELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELH 567 EL++QL LL V +A V+A WTGIP+S ++ E+ LL MEQ L Sbjct: 524 ELQQQLRTHQGF----APLLALDVDARAVATVVADWTGIPLSSLLRDEQSDLLSMEQSLE 579 Query: 568 HRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDE 627 +RV+GQ+ A+ A++ +R ++ GL N P G FL GP+G GKTE LA+ +F ++ Sbjct: 580 NRVVGQSPALCAIAQRLRAAKTGLTPENGPQGVFLLTGPSGTGKTETALTLADTLFGGEK 639 Query: 628 AMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVF 687 +++ I++SE+ E H+VS+L GAPPGYVGY +GG LTEAVR+RPYSV+LLDEVEKAH DV Sbjct: 640 SLITINLSEYQEPHTVSQLKGAPPGYVGYGQGGVLTEAVRKRPYSVVLLDEVEKAHRDVM 699 Query: 688 NILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQ---ERFGELDYAHMKELVLGV 744 N+ QV D G + DG+GR +DFRNTV++MT+NLGSD I E + A + EL+ + Sbjct: 700 NLFYQVFDRGFMRDGEGREIDFRNTVILMTANLGSDHIMQLLEEKPDATDADLHELLYPL 759 Query: 745 VSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEER-GYEIHISDEALKLL 803 + +F+P + R V+ + PLG++ + +I +++L ++ +RL + G E I+D L Sbjct: 760 LREHFQPALMARFQTVI-YRPLGQEAMRAIVEMKLAQVVRRLRQHYGLETEINDSLYDAL 818 Query: 804 SENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDR 852 + P GAR + + QQI L+QQ+L+ + K +L + D Sbjct: 819 TAACLLPDTGARNIDSLLNQQILPVLSQQLLAQQAAHRKPAQLRLGWDE 867 >UniRef50_C7RFB8 ATPase AAA-2 domain protein n=5 Tax=Clostridiales Family XI. Incertae Sedis RepID=C7RFB8_ANAPD Length = 814 Score = 681 bits (1756), Expect = 0.0, Method: Composition-based stats. Identities = 332/860 (38%), Positives = 505/860 (58%), Gaps = 80/860 (9%) Query: 7 TNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQ 66 N+ + A+ + ++ +I HL+ AL+ G + L +G N R+ + Sbjct: 3 NNRLNRLTSQARRESYSLNHDYIGSEHLLLALMK-TGSLANKALEKSGANYDLFRSIVIN 61 Query: 67 ALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADIL 126 + R + S+ + + ++A R + ++ E + A + + +++ Sbjct: 62 NIGRGNSQRPA---TEFSKKVRMIFEKSREIAMARKSSVVNEEDILQALINDDDSFTNLM 118 Query: 127 -KAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDE 185 +G I + ++ M + + + KYT DL E AE GK+DPVIGRD Sbjct: 119 FLLSGLDKKVIGKNLDDMLKEVYKTKGSSSKFSENVTKYTNDLNELAESGKIDPVIGRDT 178 Query: 186 EIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGAL 245 EI R +Q+L RR KNNP+LIG PGVGKTAI EGLAQRI+ +VP+ +K +R+L+LD+ ++ Sbjct: 179 EIERLVQILMRRRKNNPILIGAPGVGKTAIAEGLAQRIVAKDVPKIIKDKRILSLDLASM 238 Query: 246 VAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALAR 305 +AG+KYRG+FE+RLK + ++ K++ +VILFIDE H ++GAG ++G+MDA N+LKP LA+ Sbjct: 239 IAGSKYRGDFEDRLKKLFEEIGKRD-DVILFIDEFHMVLGAGASEGSMDAANILKPILAK 297 Query: 306 GELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQI 365 GE+ +GATT++EYR+++EKD+AL RR Q + V EPS+ED I++GLK++YE HH V+I Sbjct: 298 GEIQIMGATTIEEYRKHVEKDSALSRRMQPIQVDEPSLEDARKIIQGLKDKYEDHHGVEI 357 Query: 366 TDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLE 425 TD AI AA LS RYI+DR LPDKAIDLIDEA+S IR+ K ++ + ++ +L E Sbjct: 358 TDEAIEAAVDLSDRYISDRYLPDKAIDLIDEASSKIRIAAFQKEDDSAPSEDKLEKLNKE 417 Query: 426 QQALMKESD-EASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKI 484 ++ +++ D E + + D +N+ D E + + +E S ++ A + + Sbjct: 418 KEQAVRDQDFERAAELRDKINQAKFDLEIEKEKEKENKDRLFISYDDIASVVANWSKVPV 477 Query: 485 AIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWT 544 +++E + K L++ L+ + + + + +AR Sbjct: 478 -----------EKLTEDEMEKYANLDEDLKLS-------------VIGQKDAIDSVAR-- 511 Query: 545 GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFL 604 I +R+ + +K PIGSF+F+ Sbjct: 512 SIKRARVGLKDPKK--------------------------------------PIGSFIFV 533 Query: 605 GPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTE 664 GPTGVGKT L K LA +F S++ ++R+DMSE+MEK +VSRLVG+PPGYVGYEEGG LTE Sbjct: 534 GPTGVGKTYLAKTLAQNLFGSEDKLIRMDMSEYMEKFAVSRLVGSPPGYVGYEEGGQLTE 593 Query: 665 AVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDL 724 AVR PYSVIL DE+EKAHPDVFN+LLQ+LDDGRLTDGQGRTVDF+NT++IMTSN+G Sbjct: 594 AVRTNPYSVILFDEIEKAHPDVFNLLLQILDDGRLTDGQGRTVDFKNTIIIMTSNIGVRS 653 Query: 725 IQERF---------GELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIA 775 + E + E++ + +F PEF+NR+D+V++F PLGE I I+ Sbjct: 654 LSTSKSIGFELGDQKEAEEERTSEIIEKAIKDSFAPEFLNRLDQVIMFKPLGEAEIGEIS 713 Query: 776 QIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILS 835 + L++ +RL E +I + +KLL++ G+DP YGARPL+R I + I++ LA+ IL Sbjct: 714 GLMLEKTRQRLNEIDLDIVYDQKVVKLLAKEGFDPEYGARPLERHITKMIDDRLAEDILD 773 Query: 836 GELVPGKVIRLEVNEDRIVA 855 G+L + IR+ V +D +V Sbjct: 774 GKLKRDETIRISVRKDSLVF 793 >UniRef50_B7LFQ0 Putative uncharacterized protein n=1 Tax=Escherichia coli 55989 RepID=B7LFQ0_ECO55 Length = 849 Score = 681 bits (1756), Expect = 0.0, Method: Composition-based stats. Identities = 295/864 (34%), Positives = 466/864 (53%), Gaps = 45/864 (5%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +++LT + + L A + A+ + ++ LHL+ LL + L + N + Sbjct: 9 INKLTPESRNTLDSAINYAISRSHHEVDCLHLLWKLLQEHKYIAEVLYEQSLFNPEWVLN 68 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQ-KRGDNFISSELFVLAALESRGT 121 I L R+ V + S+ + +L A K + I +F+ + R + Sbjct: 69 AIESELIRINTVPQSS--PVFSESMQTLLEKTWIHASTKWQIDHIDIPVFLSTMINFRDS 126 Query: 122 -----LADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGK 176 ++D L + + + + + L KYT +L+ RAE GK Sbjct: 127 IFPLNVSDALCCDMDVAEELLISFSDEAEHSASHRPTDRSSHEYLSKYTENLSLRAETGK 186 Query: 177 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRR 236 LDPV GR++E+R+ I +L RR +NNP+L GEPGVGK++IVEGLA +I +G VP+ LK R Sbjct: 187 LDPVTGREKEVRQLIDILLRRRQNNPILTGEPGVGKSSIVEGLALQIASGRVPDVLKNVR 246 Query: 237 VLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAG 296 + ALDMGAL+AGA RGEFE RLK +L +L +G ILFIDE H+++GAG G DA Sbjct: 247 IHALDMGALLAGASVRGEFENRLKSLLTELNSLDGTAILFIDEAHSLIGAGGLPGQTDAA 306 Query: 297 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 356 N+LKPALARGEL + ATT EY++Y EKD AL RRFQ V VAEP+ + T +LR L Sbjct: 307 NLLKPALARGELRIIAATTWGEYKKYFEKDGALARRFQIVKVAEPNQDVTAEMLRSLLPM 366 Query: 357 YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 416 E HH+V I + AI A LS RY+ R+ PDK++ L+D A S + + + P+ + ++ Sbjct: 367 MEKHHNVSIREEAITATVHLSDRYLHGRRQPDKSVSLLDTACSRVAVSQSTSPDAIQDVE 426 Query: 417 RRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476 +++ + E L +E + R +ML +++ E + +L+ W+ + ++ Q+ Sbjct: 427 ASLVRYQGELALLTQERSDV--LRQEMLANKIAQLEEELEQLKSAWRHQSELVAKIQSSD 484 Query: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 536 K+LE+A + K ++ V + Sbjct: 485 D-------------------------ISSKNMYRKELESAYK---KDSPMVFECVDKNCV 516 Query: 537 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNR 596 A+V++ WTG+P+ ++ E++K + + L RV+GQ A+ A+++ + RA L DP + Sbjct: 517 ADVVSGWTGVPLGVCLDGEQQKASGLLRCLEQRVLGQRYAMSAIASQVLICRADLKDPVK 576 Query: 597 PIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGY 656 P G FL GP+G GKTE +ALA F++ + ++ I+M+EF E H+VS L GAPPGYVG+ Sbjct: 577 PDGVFLLAGPSGTGKTETARALAEFVYGDENKLITINMTEFQEAHTVSTLKGAPPGYVGF 636 Query: 657 EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 716 +GG LTE V PYSVILLDE+EKAHPDV Q+ D G + D +G+ V FR+ ++IM Sbjct: 637 GQGGTLTERVSHNPYSVILLDEIEKAHPDVLEFFFQIFDSGIIEDAEGKMVSFRDCLIIM 696 Query: 717 TSNLGSDLIQERF--GELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASI 774 TSN S+ I + GE + +KE++L + + +F F+ R + ++ F PL + + I Sbjct: 697 TSNFASENITNIWNDGETNRDRIKEMLLPLFNEHFGAAFMGRTN-LIPFTPLHSKTLRDI 755 Query: 775 AQIQLKRLYKRLEERG---YEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQ 831 I++ ++ +R E+ Y+I +D + ++ + GAR + + + LA+ Sbjct: 756 VLIKIDKICQRFEQASGQMYKIEYNDSLIDWITHHCQCDKSGARDIDSVLNSTVLPVLAR 815 Query: 832 QILSGE-LVPGKVIRLEVNEDRIV 854 + E K IR+ V ++ I Sbjct: 816 YLTDSEDNRTPKKIRISVRKNNIT 839 >UniRef50_A6VUK5 ATPase AAA-2 domain protein n=64 Tax=Gammaproteobacteria RepID=A6VUK5_MARMS Length = 873 Score = 681 bits (1756), Expect = 0.0, Method: Composition-based stats. Identities = 293/875 (33%), Positives = 462/875 (52%), Gaps = 38/875 (4%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 + +L ++ +LAL A +L + + + H +S LL V + + ++ Sbjct: 10 ISKLNSQSKLALEQAAALCIERQHHEVSIEHFLSVLLENPMSDVCVIFDHVKLGKDDIQA 69 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQ-KRGDNFISSELFVLAALESRGT 121 I++ P+ S LV ++ L+ + + S +LA+L Sbjct: 70 AISK---SYPRSTTLDTYPPFSPLLVELMQEAWLLSSTELNQTELRSGAILLASLIHPDR 126 Query: 122 LADILKAAGATTANITQAIEQMRG----------------GESVNDQGAEDQRQALKKYT 165 + G +AI + + AL K+ Sbjct: 127 YYSF-EMIGLFEKINKEAIRKNFDLVLERSSESDHVVSDSQDKSTSSSVAAGNSALGKFC 185 Query: 166 IDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIIN 225 ++T +A+ +LDPV+ R++E+ + +L RR KNNP+++GE GVGK+A+VEGLA RI+ Sbjct: 186 TNVTLQAKNDELDPVLCREDELNLMVDILCRRRKNNPIVVGEAGVGKSAVVEGLALRIVA 245 Query: 226 GEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVG 285 G VP+ L + +LD+G L AGA +GEFE+RLKG+++++ +ILFIDE HT++G Sbjct: 246 GNVPDKLANVEIHSLDLGLLQAGASIKGEFEKRLKGIIDEIKSSPVPIILFIDEAHTLIG 305 Query: 286 AGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVED 345 +G +G DA N+LKPALARGEL + ATT EY++Y EKD AL RRFQ V V EPSV Sbjct: 306 SGNQEGGSDAANLLKPALARGELSTIAATTWKEYKKYFEKDPALTRRFQLVKVEEPSVSQ 365 Query: 346 TIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQI 405 ++ I+RGL YE H V I D A+ A++ LS RY++ RQLPDKAID++D A + I + I Sbjct: 366 SVDIMRGLHHVYEKAHGVLIHDDALKASSELSARYLSGRQLPDKAIDVLDTACARIAINI 425 Query: 406 DSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELS---DKERQYSELEEEW 462 + P+ L +L+ + + E L +++ D L + E + L W Sbjct: 426 STPPKVLGQLENQCCTRQREIDMLKRQALIGQPVDNDYLESLIELEVQAELEKETLLNSW 485 Query: 463 KAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGK 522 +K + I+ + + +A ++A +L + E ELE+ Sbjct: 486 SKQKEIIEKIIDIRQSILRNPVADDEALSDDELDELREQLAASYQELEQ--------IPH 537 Query: 523 TMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSN 582 RL+ +V +IAEV++ WTG+P+ +M E K+ + + L+ ++ GQ+ A++ V Sbjct: 538 HERLMYPEVNAQQIAEVISDWTGVPIDQMNSDELHKITHLPEILNAKIKGQDVAIECVHR 597 Query: 583 AIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHS 642 + SRA L P RP G+FL +GP+GVGKTE LA ++ + + I+MSE+ EKH+ Sbjct: 598 HLLTSRADLRRPGRPKGAFLLVGPSGVGKTETVIQLAEELYGGKQFLTTINMSEYQEKHT 657 Query: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702 VSRL+G+PPGYVG+ EGG LTEA+R++PYSV+LLDEVEKAHP+V N+ Q D G L DG Sbjct: 658 VSRLIGSPPGYVGFGEGGVLTEAIRKKPYSVVLLDEVEKAHPEVLNLFYQAFDKGELADG 717 Query: 703 QGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 762 +GR +D +N + +TSNLG I + ++ + + F+P + R+ E+V Sbjct: 718 EGRLIDCQNILFFLTSNLGYQTIVDNV--ETPKEIEAKLYPELVPFFKPALLARM-EIVP 774 Query: 763 FHPLGEQHIASIAQIQLKRLYKRLEER-GYEIHISDEALKLLSENGYDPVYGARPLKRAI 821 + PL + + I +L L K L +R E+ I ++ + GAR L+ I Sbjct: 775 YLPLNKDVLEKIVLGKLSSLEKLLRKRYSAEVEIDPALVQEILNRATRSENGARMLEAII 834 Query: 822 QQQIENPLAQQILS--GELVPGKVIRLEVNEDRIV 854 + Q+ P++ +L+ E P I + + E V Sbjct: 835 EGQVLPPISLALLNRLAEQQPVSRIFMTIEEGEFV 869 >UniRef50_B7H4I2 Type VI secretion ATPase, ClpV1 family n=26 Tax=Bacteria RepID=B7H4I2_ACIB3 Length = 893 Score = 680 bits (1755), Expect = 0.0, Method: Composition-based stats. Identities = 326/885 (36%), Positives = 486/885 (54%), Gaps = 57/885 (6%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQE-GGSVSPLLTSAGINAGQLR 61 + +L+ + AL + + + N IE HL LLNQ + LL I+A L Sbjct: 9 ITKLSTAARTALEKSANACVLQQNYEIEIEHLFLELLNQPLENDLKILLKKYKISADALA 68 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGT 121 D+ + +++LP+ G ++ +VR+ LA + I S ++A L + Sbjct: 69 DDLKETISQLPK--GNTRTPIFAKSIVRLFEQAWLLASAEQNPVIRSGHLLVALLTAPDL 126 Query: 122 ----------------------LADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQ 159 +I + + + + ++ + Sbjct: 127 YQIATRASSLFDLFPIDSMKHKFLEICEKSVEQQEESKTSSQADELEQAATPTAKTQKTP 186 Query: 160 ALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGL 219 AL +YTI+LTE+A+ G +DPVIGR+ EIR + +L RR +NNP+L GEPGVGKTA+VEGL Sbjct: 187 ALDQYTINLTEKAKNGGIDPVIGREYEIRLMLDILMRRRQNNPILTGEPGVGKTAVVEGL 246 Query: 220 AQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDE 279 A +I G VPE LK + LDMG L AGA +GEFE RLK V+ ++ +ILFIDE Sbjct: 247 ALKIAQGLVPEALKNVHLHVLDMGLLQAGASVKGEFENRLKQVIQEVQSSAHPIILFIDE 306 Query: 280 LHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVA 339 HT++GAG G DA N+LKPALARGEL + ATT EY+QY EKDAAL RRFQ V V Sbjct: 307 AHTLIGAGGQAGQNDAANLLKPALARGELRTIAATTWAEYKQYFEKDAALSRRFQVVKVE 366 Query: 340 EPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAAS 399 EP+ E + +LR + + H ++QI D AIV A SHRYI+ RQLPDKA+ ++D AA+ Sbjct: 367 EPTEEVAVDMLRAMIPVMQKHFNLQIDDEAIVTAVHASHRYISGRQLPDKAVSVLDTAAA 426 Query: 400 SIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDE--ASKKRLDMLNEELSDKERQYSE 457 + + +++P +LD+L + LKLEQQ L E + +RL+ L +L + + E Sbjct: 427 RVALTQNAQPVKLDQLKAQEHNLKLEQQILENEHRQIPIHHERLENLKNQLESLQSEIQE 486 Query: 458 LEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAAT 517 +E+W+ E + Q ELE + E Y +I + K L Sbjct: 487 TQEQWQKELELVRKIQ----ELEAQSHSNES------------EAYDQINLIRKDLADIQ 530 Query: 518 QLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAV 577 + L+ +V I E+++ WTGIPV +M+ E +++L +E +L RV+GQ+ A+ Sbjct: 531 GQQ----PLVFERVNSQIINEIISDWTGIPVGKMVNDEIKQILTLEDKLGERVMGQDYAL 586 Query: 578 DAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEF 637 + I+ S+A L DPN+P G FL +GP+GVGKTE ALAN ++ ++ ++ I+MSE+ Sbjct: 587 TQLVQGIKTSKAKLEDPNKPQGVFLLVGPSGVGKTETALALANELYGGEQHLITINMSEY 646 Query: 638 MEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDG 697 E H+VS L GAPPGYVGY +GG LTEAVRR PYSV+LLDE+EKAH DV + QV D G Sbjct: 647 QEAHTVSSLKGAPPGYVGYGQGGVLTEAVRRNPYSVVLLDEIEKAHSDVQELFYQVFDKG 706 Query: 698 RLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGE------LDYAHMKELVLGVVSHNFRP 751 L DG+GR +DF+NT +++TSN GS I + + E + + F+P Sbjct: 707 TLEDGEGRVIDFKNTTILLTSNTGSSAIMQACLNQPVEEWPTAEDLIEHLKPSLYKQFKP 766 Query: 752 EFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEER-GYEIHISDEALKLLSENGYDP 810 F+ R+ +V + PL + + I + +L ++ R+E++ G E+ SD+ ++LL + Sbjct: 767 AFLGRM-RIVPYFPLHDDLLVRIIKHKLGKITARIEKQYGTEVQYSDDLVELLLSRCTEV 825 Query: 811 VYGARPLKRAIQQQIENPLAQQIL--SGELVPGKVIRLEVNEDRI 853 GAR + + + LA +IL + K+I ++ +D I Sbjct: 826 DSGARNVDNILNSTVLPALATEILVALADQKLPKLIMIDAKDDEI 870 >UniRef50_Q98IM7 Probable ClpA/B-type protease n=6 Tax=Rhizobiales RepID=Q98IM7_RHILO Length = 945 Score = 678 bits (1749), Expect = 0.0, Method: Composition-based stats. Identities = 316/920 (34%), Positives = 480/920 (52%), Gaps = 78/920 (8%) Query: 5 RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDI 64 +L A A A N ++E +H + L+ E V ++ AG++ +L D+ Sbjct: 18 KLNPTGLRAFKAAADTAKMRGNPYVELVHFVQQLVLSERSDVQMIVADAGLDVSRLTADM 77 Query: 65 NQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQ-KRGDNFISSELFVLAALESR---- 119 +A+++LP G + S + + LA + G + S +LA L++ Sbjct: 78 TRAIDKLP--YGATSVEEFSDHIFHAIQEGWSLATLEFGVEEVRSAHILLACLKTPALEG 135 Query: 120 ------------GTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTID 167 I + A T ++ + AL KY D Sbjct: 136 LVSKISAEFDKIDADGVIARFADVTEGSLEAGSPPAAAAAETPMKRGLGGDSALAKYATD 195 Query: 168 LTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGE 227 LT+RA GK+DPVIGRD EIR+ + +L RR +NNP+L GE GVGKTA+VEG A RI G+ Sbjct: 196 LTQRARDGKIDPVIGRDPEIRQIVDILMRRRQNNPILTGEAGVGKTAVVEGFALRIAQGD 255 Query: 228 VPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAG 287 VP L+ V LD+G + AGA +GEFE+RLK V++++ E +ILFIDE HT++GAG Sbjct: 256 VPPTLQNVSVRMLDVGLMQAGASVKGEFEKRLKAVIDEVQASETPIILFIDEAHTLIGAG 315 Query: 288 KADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTI 347 A G DA N+LKPALARGEL + ATT EY+Q+IEKD AL RRFQ V + EPS + Sbjct: 316 GAAGTGDAANLLKPALARGELRTIAATTWAEYKQHIEKDPALTRRFQVVKIEEPSETVAV 375 Query: 348 AILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDS 407 +LRG+ E HH VQI D AI A+ +LSHRYI RQLPDKA+ L+D A + + + + Sbjct: 376 LMLRGVAGVLEQHHKVQILDEAIEASVSLSHRYIPARQLPDKAVSLLDTACARVAVSQHA 435 Query: 408 KPEELDRLDRRIIQLKLEQQALMKESDEASK--KRLDMLNEELSDKERQYSELEEEWKAE 465 P E++ + RR L++E+ + +E+ + R + L++ E + + W E Sbjct: 436 TPAEVEDILRRRQALEVEEGIIGREAAIGIEVVDRQARVEAGLAETETTLAAAQARWDRE 495 Query: 466 KASLSGTQTIKAEL----------------------------------EQAKIAIEQARR 491 KA ++ ++A+L E E A Sbjct: 496 KALVAEILDLRAKLRGEGVPLDAVEGGEAAPGEAVDAPAATSHERKAPEAKTPKPETAEP 555 Query: 492 VGDLARMSELQYGKIPELE-----------------KQLEAATQLEGKTMRLLRNKVTDA 534 G ++ ++ + K+ + ++L A L+ V Sbjct: 556 KGSKSKSAKTKAAKMEAVAAHEPVPVPDSAADLARLRELMAELAEAQGETPLILPSVDRN 615 Query: 535 EIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADP 594 +A V+ WTGIP RM+ S+ EK L++ L RV+GQ+ A++ ++ ++ SRAGL P Sbjct: 616 AVAAVVQDWTGIPTGRMLSSQTEKALKLAATLAERVVGQDHAMEMIARRVQTSRAGLGAP 675 Query: 595 NRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYV 654 +P+G FL GP+GVGKTE ALA ++ ++ ++ I+MSEF E H+VS L GAPPGYV Sbjct: 676 EKPVGVFLLCGPSGVGKTETALALAETLYGGEQNLISINMSEFQEAHTVSTLKGAPPGYV 735 Query: 655 GYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVV 714 GY +GG LTEAVRR+PYSVILLDEVEKAHPDV I QV D G + D +GR +DF+NT++ Sbjct: 736 GYGKGGILTEAVRRKPYSVILLDEVEKAHPDVHEIFFQVFDKGMMDDSEGRRIDFKNTLI 795 Query: 715 IMTSNLGSDLIQERFGE----LDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQH 770 ++TSN+GS++I +R + + G + F F+ R+ + ++PL + Sbjct: 796 LLTSNVGSEVIMDRTKNGTLRTGMDDLDTALRGPLLKVFPAAFLGRV-VTIPYYPLSDAM 854 Query: 771 IASIAQIQLKRLYKRLEE-RGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPL 829 I +I + Q ++ +RL+ E+ I D + ++ + G R + + + L Sbjct: 855 IEAITRHQFGKIARRLKATNDAELVIGDGVMDMVKARCTEIESGGRMIDAILTNTLLPEL 914 Query: 830 AQQILSGELVPGKVIRLEVN 849 ++ +L+ L K+ ++ V Sbjct: 915 SRGVLNRSLEGKKMTKVTVG 934 >UniRef50_A6EIG8 Putative ATP-dependent protease n=1 Tax=Pedobacter sp. BAL39 RepID=A6EIG8_9SPHI Length = 828 Score = 677 bits (1746), Expect = 0.0, Method: Composition-based stats. Identities = 298/856 (34%), Positives = 476/856 (55%), Gaps = 54/856 (6%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M + ++ +LA+ AQSLA + N HL+ L+++E G + L S + + Sbjct: 1 MNISNISESVRLAIRVAQSLAKEYHNAEFSAAHLLKGLMHKEVGLIG-FLNSIDKDEAYI 59 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESR- 119 ++ L +V DV+ +++ + D + K G + I+ + A + Sbjct: 60 SEWAEVRIDELDKVAVAPDDVKGGREIAGIFEEADLVRIKLGLDLITPVCVLTALCKPTV 119 Query: 120 GTLADILKAAGATTANIT---------QAIEQMRGGESVNDQGAEDQRQALKKYTIDLTE 170 G D LK+ I + + +E + AL KY ID Sbjct: 120 GFPPDQLKSFPIKEKEILDLYLDDTELKQAVKPGTTVDAKTGSSEGAKAALHKYCIDRIA 179 Query: 171 RAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPE 230 +A GK DP+IGRD+E R +++L RRTK N ++ G+ GVGKTA+V+GLAQ I++G VP Sbjct: 180 QARDGKTDPIIGRDKETRMVLEILGRRTKPNVIITGDAGVGKTALVDGLAQDILSGNVPA 239 Query: 231 GLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKAD 290 LK ++ LD+G+L+AGA Y+GE E+RLK +L ++ + + ILFIDE+HT++ Sbjct: 240 ILKNVQLFELDLGSLIAGASYKGEIEDRLKNILKEIKQYD-KAILFIDEIHTLLDNKGPI 298 Query: 291 GAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAIL 350 G GN+LKP LARGE+ +GATT+DEYR+ IE + A RRF+ + V EP+ I +L Sbjct: 299 GG-GVGNLLKPELARGEITVIGATTMDEYRKIIEPEQAFSRRFEVLQVQEPNEASAIKML 357 Query: 351 RGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPE 410 L E+YE HH ++I AI L+ RY+ DR+LPD A DL+D ++++M D+ + Sbjct: 358 EKLAEKYEQHHQLKIQKDAIPECVRLAKRYMKDRRLPDAAFDLLDRTMAAMKMMNDTSDQ 417 Query: 411 ELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLS 470 L LD ++QL E + +L + + S + ++ + Sbjct: 418 VLAELDADLLQL---------NEAEVADDQLADYRWLYQQMQDKVSPILVGQLTDETQVD 468 Query: 471 GTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNK 530 +T++ + ++ + + + ++ Sbjct: 469 AFETVEEFKDYISRNLDALKVLAETK-------------------------------HDE 497 Query: 531 VTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590 V +IA +++ TGIP+ ++ E+EKLL ME L RV+GQ+ A+ +V++AI SR+G Sbjct: 498 VAKQDIASIVSYKTGIPLGKIQAQEKEKLLNMEGYLKKRVVGQDRALKSVADAILESRSG 557 Query: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAP 650 L +PIGSF LGPTG GKTEL K++A F+F+ ++AM+R DMSEF E+HS + L GAP Sbjct: 558 LNKKGQPIGSFFLLGPTGTGKTELAKSIAEFLFNDEKAMIRFDMSEFKEEHSAALLYGAP 617 Query: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFR 710 PGYVGYEEGG L +R++PYSV+L DE+EKAHP VF+ LQ+LD+G + D G+ DF Sbjct: 618 PGYVGYEEGGLLVNKIRQQPYSVLLFDEIEKAHPSVFDTFLQILDEGHMHDRLGKEGDFS 677 Query: 711 NTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQH 770 N +++ TSN+GS+ I E+ + + ++ +++ +FRPEF+ R+ E+V F P+ E + Sbjct: 678 NALILFTSNIGSEWIAEQLSK-SLVPTSQQLMEIMARHFRPEFLARLSEIVPFAPISEDN 736 Query: 771 IASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLA 830 + I +IQL+ L + L+++G I + A K+L+ +G+ P YGAR L I+ ++ P++ Sbjct: 737 VVRIFEIQLRSLVEALDKQGITFEIDEAATKMLALSGFTPKYGARQLSGVIRNELRRPIS 796 Query: 831 QQILSGELVPGKVIRL 846 + I+SG L G I++ Sbjct: 797 KYIISGALKKGNFIQV 812 >UniRef50_B3XE87 Type VI secretion ATPase, ClpV1 family n=1 Tax=Escherichia coli 101-1 RepID=B3XE87_ECOLX Length = 843 Score = 675 bits (1742), Expect = 0.0, Method: Composition-based stats. Identities = 289/863 (33%), Positives = 464/863 (53%), Gaps = 45/863 (5%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 + +LT + L A +LA+ + ++ +HL+ +++ + + L +N + Sbjct: 9 ISKLTPSAKKHLDMAINLAVSRRHYEVDIIHLIYVIISNDENLIEQLAKETLLNPPSIIN 68 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLA--QKRGDNFISSELFVLAALESRG 120 I + LPQ G S+ LV + A + + + LF R Sbjct: 69 AIEKEFMELPQ--GDVNTPVFSETLVSFIEKSWLHATTKWSCSSLDTPALFATVLYTERE 126 Query: 121 TLADILKAAGATTANITQAI--EQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLD 178 L + + + + + I + A L++YTI+L+ AE+G++D Sbjct: 127 LLPEHVSYSLNCQKKVAENILRQSCEASAITTQDNAFSSNSMLERYTINLSTSAEEGRID 186 Query: 179 PVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVL 238 PVIGRD EIR+ I +L RR +NNP+L GEPGVGKT I+EGLA RI G+VPE L+ VL Sbjct: 187 PVIGRDNEIRKLIDILLRRRQNNPILTGEPGVGKTCIIEGLALRIKEGKVPETLRNVEVL 246 Query: 239 ALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNM 298 LD+ AL+AGA +GEFE RL+ +L ++ K+ ++LFIDE H +VGAG G DA N+ Sbjct: 247 TLDLTALLAGASAKGEFENRLQHILKEIEKKAKRIVLFIDEAHMLVGAGGLAGQTDAANL 306 Query: 299 LKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYE 358 LKPALARG L + ATT EY++Y EKDAAL RRFQ + V+EP V A+LR L + Sbjct: 307 LKPALARGTLRVIAATTWSEYKKYFEKDAALARRFQIIRVSEPDVNAASAMLRALVPAFI 366 Query: 359 LHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418 HH+V IT+ AI AA LS+RYI+ R+LPDKA+ L+D A S + + P+E++ ++ Sbjct: 367 SHHNVDITEGAIKAATNLSNRYISGRKLPDKAVSLLDTACSHVSLSQTHIPKEIEYIEAN 426 Query: 419 IIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAE 478 I + E AL R + LN+ ++ + L WK + ++ + + Sbjct: 427 IKRDMTELSALENN----DVLRKNQLNKNINFFNDRLLLLNSIWKHQLDLVNKIKECQD- 481 Query: 479 LEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAE 538 Y +I L +L+ + + ++ +V + IA+ Sbjct: 482 ------------------------YDEIHALRMELKKSHR---DVAPMVFERVDETCIAD 514 Query: 539 VLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPI 598 V++ WTGIP+ +E+E+EK + L R+IGQ+ A+ +S+ I +A L DP++P Sbjct: 515 VVSEWTGIPLGTFLETEKEKSKALLSRLQQRIIGQDYALSVISSQIEICQANLHDPHKPT 574 Query: 599 GSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEE 658 G +LF GP+G+GKTE ALA ++ ++ I+MSEF E HS+S L GAPPGYVG+ Sbjct: 575 GIYLFAGPSGIGKTETAHALAELVYGGSNNLITINMSEFQEAHSLSGLKGAPPGYVGFGH 634 Query: 659 GGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTS 718 GG LTE V+R P+ VILLDE+EKAHPDV + QV D G + DG+G+ ++FRNT++IMTS Sbjct: 635 GGILTEGVKRNPFCVILLDEIEKAHPDVIELFYQVFDKGTMEDGEGQLINFRNTLIIMTS 694 Query: 719 NLGSDLIQERF--GELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQ 776 NL + + + + G+ +++ ++ + F+ F+ R++ ++ F PL + + I + Sbjct: 695 NLAASQLNDLWISGDKSISNILSVIRPIYDDFFQSAFMGRVN-LIPFLPLSQDSLKRITK 753 Query: 777 IQLKRLYKRLE---ERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQI 833 ++++++ +R+ + + + + N GAR + + + LA+ I Sbjct: 754 MKIEKICQRVSDATDHKIIVKYKKSLITWILGNCKYIQSGAREIDMILNHNVLPLLAKHI 813 Query: 834 LSGELVP-GKVIRLEVNEDRIVA 855 + ++ + L + + IV Sbjct: 814 CNNDVNNFTGCLNLFIKNNTIVV 836 >UniRef50_C5ALE8 ATPases with chaperone activity, ATP-binding subunit n=3 Tax=Burkholderia RepID=C5ALE8_BURGB Length = 933 Score = 674 bits (1739), Expect = 0.0, Method: Composition-based stats. Identities = 308/899 (34%), Positives = 473/899 (52%), Gaps = 59/899 (6%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +L +L A + + N ++E +H + L+ G + ++ I+ +L Sbjct: 9 FGKLGTTLFRSLESATTFSKLRGNPYVELVHWLHQLIALADGDLQRIVRHCEIDRARLDR 68 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQK-RGDNFISSELFVLAALESRGT 121 D+ AL LP G+ D S + + LA G++ I + A +E+ Sbjct: 69 DLQDALAALPSGAGSLSD--FSHHVDAAIERAWVLATLVFGEHRIRGAWLMAALIETPEL 126 Query: 122 LADIL---KAAGATTANITQA---------------------IEQMRGGESVNDQGAEDQ 157 +L + G + GE+ + A + Sbjct: 127 RRVLLSCSREFGRIPVDGLHEALPAWIAGSPEADDTPYDHSDFSPAVPGEASDAMAAPAR 186 Query: 158 RQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVE 217 +L+++ DLT RA +G++DPV+GRD EIR + VL RR +NNP+L G+ GVGKTA+VE Sbjct: 187 GSSLEQFCADLTARALKGEIDPVVGRDIEIRTMVDVLLRRRQNNPLLTGDAGVGKTAVVE 246 Query: 218 GLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFI 277 GLA I G+VP L R+L LD+GAL+AGA RGEFE RLK V+ K VILFI Sbjct: 247 GLALAIARGDVPPKLAEVRLLNLDVGALLAGASMRGEFEARLKSVIEAAGKAPVPVILFI 306 Query: 278 DELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVF 337 DE+HT++GAG G DA N+LKPALARG L +GATT EY+++IEKD AL RRFQ + Sbjct: 307 DEIHTLIGAGGQAGTGDAANLLKPALARGTLRVIGATTWAEYKRHIEKDPALTRRFQVLQ 366 Query: 338 VAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEA 397 VAEP + ++RGL + HH V + D A+ A+ LSHRY+ RQLPDKAI L+D A Sbjct: 367 VAEPEPGAAVDMVRGLVGTFSRHHGVVVLDEAVRASVMLSHRYLPSRQLPDKAISLLDTA 426 Query: 398 ASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESD--EASKKRLDMLNEELSDKERQY 455 + + + + P EL L +++ ++E L E + + +++ E Q Sbjct: 427 CARVALSQHAPPRELQYLRQQLEAARIESALLDAERRVGIGDGASWSEVAQRIAELEVQA 486 Query: 456 SELEEEWKAEKASLSGTQTIKAELEQAKIAIEQA--------------------RRVGDL 495 ++E+ W+A+ ++ +AE E + Sbjct: 487 RDIEQAWQAQVEAVRALLEARAETEGEDERGGEPDGGAGQPCLPADPDTGPAERAVAPAA 546 Query: 496 ARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESE 555 A + + ++ L++QL L+ +V++A +A +++ WTGIPV RM+ E Sbjct: 547 AHVDTAAFERLHLLDRQLRQLQ----GGRPLVFPEVSEAMVAAIISDWTGIPVGRMVTDE 602 Query: 556 REKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELC 615 + R+ + L RV+GQ +A+ ++ I+ +RAGLADP +P+G FL GP+GVGKTE Sbjct: 603 IAAVRRLSETLSARVVGQTDALRQIAERIQTARAGLADPAKPLGVFLLTGPSGVGKTETA 662 Query: 616 KALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVIL 675 ALA ++ ++ ++ I+MSE+ E H+VS L GAPPGYVGY EGG LTEAVRRRPYSV+L Sbjct: 663 LALAEALYGGEQNLITINMSEYQEAHTVSSLKGAPPGYVGYGEGGVLTEAVRRRPYSVVL 722 Query: 676 LDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYA 735 LDE+EK+H DV + QV D G + DG GR +DFRNT +++TSN+G++L+ + A Sbjct: 723 LDEIEKSHSDVKEMFFQVFDKGYMEDGDGRYIDFRNTTILLTSNVGAELLTSLCADEALA 782 Query: 736 HMKELVL----GVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEE-RG 790 + + V+ F F+ R+ VV F PL + + IA++ L R+ +R+ + G Sbjct: 783 PESDALRMALGPVLLKAFPAAFLGRVT-VVPFRPLAQGSLVQIARLYLDRVARRMADHHG 841 Query: 791 YEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVN 849 E+ + + GAR + I+Q + L++ L + ++ R+E+ Sbjct: 842 VELVYAPAVADYVVARCLVQETGARLMIGFIEQHLLPALSRHWLDALISNRRLARIEIE 900 >UniRef50_A8Q6N1 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8Q6N1_MALGO Length = 853 Score = 674 bits (1738), Expect = 0.0, Method: Composition-based stats. Identities = 358/872 (41%), Positives = 512/872 (58%), Gaps = 86/872 (9%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQE--------------GGSVSPLLT 51 T++ Q +LA A LA + + + P H+ ALLN + + Sbjct: 6 FTDRAQNSLAAAFQLAKDYAHAQLAPSHIALALLNDDTSNSTGVQSTNKDSQSLFKSICE 65 Query: 52 SAGINAGQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELF 111 G++ L + AL ++PQ DV + +++ + ++ D FI+ + Sbjct: 66 KTGVSVPDLENKLRAALRKIPQQSPAPDDVSLTGAASKIMKNAQQYKTQQRDAFIAQDHV 125 Query: 112 VLAALESRGTLADILKAAGATTANITQ-AIEQMRGGESVNDQGAEDQRQALKKYTIDLTE 170 +LA LE ++ ++LK AG ++ + AI Q RGG ++ + AE A+ KY DLT Sbjct: 126 LLALLED-SSINNMLKEAGLANPDLMKNAITQARGGRHIDSKTAEAGYDAMGKYCTDLTA 184 Query: 171 RAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPE 230 A +GKLDPVIGRD EIRR ++VL RRTKNN VLIG PGVGKTA+VEGLAQR+I+ +VP Sbjct: 185 LAAEGKLDPVIGRDNEIRRVVRVLSRRTKNNAVLIGSPGVGKTAVVEGLAQRVIDRDVPP 244 Query: 231 GLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGN---VILFIDELHTMVGAG 287 L G+ + +LDMG L+AGAKY+GE+EER+K VL+D+ K + ILFIDE+H M+ Sbjct: 245 NLLGK-IYSLDMGGLMAGAKYKGEYEERVKAVLSDIEKMTNDGTPCILFIDEMHLMMAGK 303 Query: 288 KADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTI 347 D MDA N+LKP LARG+L C+GATTL+EYRQ IEKDAALERRFQ+V V EP+VEDTI Sbjct: 304 GGDTGMDAANLLKPMLARGKLRCIGATTLNEYRQSIEKDAALERRFQQVIVEEPTVEDTI 363 Query: 348 AILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDS 407 AILRGL+E+YE+HH V+I D A+V+AA L+ RY+ R+LPD AIDL+DE+ + + + ++ Sbjct: 364 AILRGLREKYEVHHGVRILDAAVVSAAQLAKRYLTARKLPDSAIDLVDESCADVTVSRET 423 Query: 408 KPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKA 467 PE +D L+RR ++L++ AL +E D SK+RL+ +EL+ + + + ++ E++A++A Sbjct: 424 VPEAIDTLERRKVRLQIAMTALEREKDPQSKERLEETRQELAHLDDELAPMKAEFEAQRA 483 Query: 468 SLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQ----LEGKT 523 ++ ++E+ + A R DL S+L Y IP+LEK+ E + E + Sbjct: 484 KGDELNNVRRKIEELRAKASDAERRYDLETASDLMYYAIPDLEKRAEQLQEQARKDEAEG 543 Query: 524 MRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNA 583 N VT IA + +++ Sbjct: 544 KTSQANTVTSENIASIN-------------------------------------RPIASF 566 Query: 584 IRRSRAGLADP--NRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKH 641 + +G ++ + S++F P +AMVRID SE+ EKH Sbjct: 567 LFCGPSGTGKTLMSKTLASYMFDDP--------------------DAMVRIDASEYSEKH 606 Query: 642 SVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTD 701 S+SRL+GAPPGYVG++EGG LTEAVRRRP+S++L+DE+EKA + + LQVLD+GRL D Sbjct: 607 SISRLIGAPPGYVGFDEGGVLTEAVRRRPFSIVLIDEIEKAAREFVQLFLQVLDEGRLQD 666 Query: 702 GQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVV 761 QGR V FRNT++IMTSNLGS I E E +++LV G +S +F PEFINRID +V Sbjct: 667 SQGRLVSFRNTIIIMTSNLGSSFINESEDEDLTESVRQLVQGAISAHFPPEFINRIDSIV 726 Query: 762 VFHPLGEQHIASIAQIQLKRLYKRLEERGYE--IHISDEALKLLSENGYDPVYGARPLKR 819 F LG + I I++K L KRL E G + + + +EA L GY P GARPL R Sbjct: 727 TFRKLGRVDVRRIVDIRIKELQKRLIENGRQSRLVVDEEAKDWLGSIGYSPTMGARPLGR 786 Query: 820 AIQQQIENPLAQQILSGELVPGK-VIRLEVNE 850 AIQ Q+ NPL+ IL G++ I + ++ Sbjct: 787 AIQDQLLNPLSMLILRGQIHNDDPEIHISFDK 818 >UniRef50_Q7N4N8 Similar to ClpA/B-type chaperone n=3 Tax=Enterobacteriaceae RepID=Q7N4N8_PHOLL Length = 860 Score = 672 bits (1735), Expect = 0.0, Method: Composition-based stats. Identities = 297/869 (34%), Positives = 478/869 (55%), Gaps = 51/869 (5%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 + +LT + + L +A +LA+ + +E HL+ AL ++ ++ + GI++ L Sbjct: 9 VSKLTVEARQCLDEAVNLAVRRTHHEVEIEHLLLALFEKQLPTMEQVCHHGGIDSMTLLN 68 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQ-KRGDNFISSELFVLAALESRGT 121 ++L L + +L + A G + I++++ ++A + + Sbjct: 69 ACQRSLALLRSGNHRP--PVLATNLTEWMEQTWMYASTHWGASQITAQVLIVALIMNPSL 126 Query: 122 LADILKAAGATTANITQAIE------QMRGGESVNDQGAEDQRQALKKYTIDLTERAEQG 175 + T IE + + ++ + AL +YT LT+ A Sbjct: 127 HHSLTSELQQALQGNTDGIEPWLRTQTNTTPQHITAPVGDNTQSALAQYTHHLTQAARDN 186 Query: 176 KLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGR 235 KLDPV+GR+ EIR+ I VL RR +NNP+L GE GVGKTA++EGLAQRI++G VP+ L Sbjct: 187 KLDPVLGREREIRQLIDVLLRRRQNNPLLTGEAGVGKTALIEGLAQRIVDGRVPKVLAQA 246 Query: 236 RVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDA 295 + LDMG L AGA +GEFE RL+ +L+++ K VILFIDE HT++GAG G DA Sbjct: 247 ELFTLDMGLLQAGASVKGEFESRLQKLLDEVKKYPTPVILFIDEAHTLIGAGGQAGQNDA 306 Query: 296 GNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKE 355 N+LKPALARGEL + ATT EY++Y EKDAAL RRFQ + V EPS+E IA+LR + Sbjct: 307 ANLLKPALARGELRAIAATTWSEYKKYFEKDAALARRFQLIKVEEPSLELAIAMLRAITP 366 Query: 356 RYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRL 415 E HH+V++ A+ A TL++RYI RQLPDK++ L+D A + + + +P ++ L Sbjct: 367 AMEKHHNVKVLAEAVTEAVTLANRYITGRQLPDKSVSLLDSACARVAVSQTDEPAPIEDL 426 Query: 416 DRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTI 475 + + EQ+AL++E + +L L + + + +E+ E+ A++ ++ Sbjct: 427 RAMLANIAAEQEALLREG--GHETQLQKLAQRQAKLQASLAEILPEYHAQRQLVNDILAC 484 Query: 476 KAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAE 535 E ++P L +L + + V A Sbjct: 485 DEHDE------------------------RLPVLRAELHQRHH----QHAYVFDCVDAAC 516 Query: 536 IAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPN 595 +A+++A WTGIP+ RM+E+ER+ L ++E L RV+GQ+ A+ ++ IR ++ LADP Sbjct: 517 VADIVAGWTGIPLGRMVENERDVLRQLETRLGQRVMGQDHALSQIARQIRIAKVQLADPI 576 Query: 596 RPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVG 655 +P G F+ GP+GVGKTE ALA+ ++ + ++ I+MSE+ E HSVS L G+PPGYVG Sbjct: 577 KPTGVFMLAGPSGVGKTETALALAHELYGGEHHLITINMSEYQEAHSVSGLKGSPPGYVG 636 Query: 656 YEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVI 715 Y +GG LTEAVRR+PYSV+LLDEVEKAHPDV + QV D G + D +G+ ++FRNT++I Sbjct: 637 YGQGGVLTEAVRRQPYSVVLLDEVEKAHPDVLELFFQVFDKGMMEDAEGQQINFRNTLII 696 Query: 716 MTSNLGSDLIQERFGE----------LDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHP 765 +T+N SDL+ ++E++ + F P F+ R+ +V+ + P Sbjct: 697 LTTNAASDLVMRAAMHGVKEQGENRPATLEDIQEIIRPELQRIFTPAFLGRL-QVIPYLP 755 Query: 766 LGEQHIASIAQIQLKRLYKRLEER-GYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQ 824 + + + +I +L ++ R + E+H SD + +++ GAR + + Q Sbjct: 756 VQGEVLHAIVHHKLNKIVTRYRQSTQCELHYSDTLVDFIAKGCQIAESGAREIDNLLTQF 815 Query: 825 IENPLAQQILSGELVPGKVIRLEVNEDRI 853 + L+ Q+L G + + + ++V + +I Sbjct: 816 VLPLLSDQLLLGGVPVNQDVWMDVIDGQI 844 >UniRef50_A0K1M3 ATPase AAA-2 domain protein n=6 Tax=Bacteria RepID=A0K1M3_ARTS2 Length = 857 Score = 671 bits (1732), Expect = 0.0, Method: Composition-based stats. Identities = 350/876 (39%), Positives = 487/876 (55%), Gaps = 96/876 (10%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 L+ + L+ A A+ + ++ LH++ + E + + AG + + Sbjct: 41 LSRRTHEVLSLAGQFAVDLGHGDVDALHILRTMAGAE--PATSYMRRAGADPAAVARAAE 98 Query: 66 QALNRLPQVEGTGGDVQP--SQDLVRVLNLCDKLAQKRGDNFISSELFVLAA-LESRGTL 122 + L P+ G P + R L ++A+ G +I E A L Sbjct: 99 ERL---PEKSGRAATSAPALTPSAQRALLDAYQVARAFGSTYIDPEHLFFALVLNQDAPA 155 Query: 123 ADILKAAGATTANITQAIEQMRGGESVND-----------QGAEDQRQALKKYTIDLTER 171 +L AAG T + + G E G L Y DLT Sbjct: 156 GQVLAAAGVTPESFQAGARETSGTEPSGAGAPDAAASASGTGTAAATPMLDTYGTDLTAL 215 Query: 172 AEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEG 231 A G LDPVIGR +E +TI+VL RRTKNNPVLIGE GVGKTAIVEGLAQ I G VPE Sbjct: 216 ARSGGLDPVIGRSDETAQTIEVLARRTKNNPVLIGEAGVGKTAIVEGLAQAIAAGTVPEQ 275 Query: 232 LKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMV-GAGKAD 290 L+ +RV++LD+ A++AG +YRG+FEERL ++++ G ILFIDELHT++ G + Sbjct: 276 LRNKRVISLDLPAMLAGTRYRGDFEERLTKAMDEVTANPGQFILFIDELHTVIGAGGAGE 335 Query: 291 GAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAIL 350 G MDAGN+LKP LARGELH VGATT +EYR+ +EKD A ERRFQ V V EP+VED + IL Sbjct: 336 GGMDAGNILKPRLARGELHVVGATTFNEYRK-VEKDPAFERRFQPVQVGEPAVEDAVQIL 394 Query: 351 RGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPE 410 GL+ERYE HH V+ TD A+ AA LS RY+ DR LPDKAIDL+D+A + + +++ S+ + Sbjct: 395 SGLRERYEEHHGVRYTDEAVRAAVELSARYVTDRFLPDKAIDLMDQAGARLSLKLGSR-Q 453 Query: 411 ELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLS 470 + L R++ L+ + A + D + R + + L+E+ AS Sbjct: 454 DAAALRERLVALEESKTAAIAAEDFEAASR----------LRDEANALKEKLDGGAASQE 503 Query: 471 GTQTIKAELEQAKIAIEQARRVGDLA-RMSELQYGKIPELEKQLEAATQLEGKTMRLLRN 529 G + A + +A+IA +R G A R++E ++ LE+ L + + L+ Sbjct: 504 GPGSESAVVGEAEIAEIISRATGIPASRITEGDRERLARLEEDLHQRVVGQEDAVSLIAK 563 Query: 530 KVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA 589 V RR+R Sbjct: 564 SV-----------------------------------------------------RRNRT 570 Query: 590 GLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGA 649 G+ RPIGSFLFLGPTGVGKTEL KALA +F S+++M+R DMSEF E+H+VSRLVGA Sbjct: 571 GMGAAGRPIGSFLFLGPTGVGKTELAKALAGSLFGSEDSMIRFDMSEFGERHTVSRLVGA 630 Query: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709 PPGYVGY+E G LTE VRR PYS++LLDEVEKAHPDVFN+LLQVLDDGRLTDG GRTVDF Sbjct: 631 PPGYVGYDEAGQLTERVRRNPYSIVLLDEVEKAHPDVFNLLLQVLDDGRLTDGHGRTVDF 690 Query: 710 RNTVVIMTSNLGSDLIQERFGELDY----------AHMKELVLGVVSHNFRPEFINRIDE 759 RNTVVIMTSNLGS+ + + G + +++ VL + + RPEF+NRIDE Sbjct: 691 RNTVVIMTSNLGSEFLASKAGPTGFTAAGDAFGSEKALRDRVLARLRESMRPEFLNRIDE 750 Query: 760 VVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKR 819 +V+F L + I ++ L RL +G + +S++A+ ++E GY+P YGARP++R Sbjct: 751 IVLFRKLDRAQLRQIVRLMLDETDARLRSQGIGLVVSEDAVDWIAERGYEPEYGARPMRR 810 Query: 820 AIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855 IQ+++++ +A ++ L G + + + +V Sbjct: 811 VIQRELDDRIADLLVGSGLAAGGQVTVSADGPELVV 846 >UniRef50_C5NWX3 Negative regulator of genetic competence ClpC/MecB n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NWX3_9BACL Length = 824 Score = 670 bits (1728), Expect = 0.0, Method: Composition-based stats. Identities = 333/885 (37%), Positives = 498/885 (56%), Gaps = 103/885 (11%) Query: 5 RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDI 64 R + L A+ A + + HL+ A+L+ + +L G+ R + Sbjct: 4 RFNETALMVLTTAKEEANDFGVKAVGTEHLLLAMLSMQNTISCKVLNRHGVYYDDFRKSV 63 Query: 65 ----NQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLA------ 114 L + + VR + + A ++SE +L+ Sbjct: 64 VDFYEAELEGTDFYRNVLMKIDYTNGAVRTIENSQRYADDTSSFVVTSEHLLLSLLEEET 123 Query: 115 -----ALESR---------GTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQA 160 L + L D++K A + + + +++ + + + + Sbjct: 124 GTAVRLLTDKLGINVDALVDELFDLVKKNHALVSKLYEGFKKI-----TESENSSSKTKT 178 Query: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220 L DLT A KLDPV+ RD+EI R I++L RRTKNNPVLIGEPGVGKTAIVEGLA Sbjct: 179 LNSLAKDLTRDAFNNKLDPVLARDKEITRMIEILNRRTKNNPVLIGEPGVGKTAIVEGLA 238 Query: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280 +RI++ VP L G+RV+ LDMG L+AG KYRGEFEERLK ++ ++ G++ILFIDE+ Sbjct: 239 ERIVSQNVPSNLLGKRVMVLDMGTLLAGTKYRGEFEERLKNIIAEIEDA-GDIILFIDEI 297 Query: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340 HT++GAG ++G+ DA N+LKPAL+RG + C+GATT +EYR+Y EKDAALERRFQ + V E Sbjct: 298 HTIIGAGGSEGSADASNILKPALSRGLIQCIGATTTEEYRKYFEKDAALERRFQPIKVEE 357 Query: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400 PS ED+I IL GL+ +YE HH V+I D AI +A LS YI DR LPDKAIDLIDEA S Sbjct: 358 PSTEDSIKILEGLRHKYEEHHDVEILDEAICSAVKLSTTYITDRCLPDKAIDLIDEACSK 417 Query: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQ-ALMKESDEASKKRLDMLNEELSDKERQYSELE 459 ++++ P++L + + +L E+ A++ + E + K+ D +N+ +S E + Sbjct: 418 VKLRYYKSPDKLKEYEDELTRLNKEKDRAVINQEFEIAAKKRDEVNKVISKIEEFKISWQ 477 Query: 460 EEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQL 519 + +K ++ + + A + +++E + ++ +LE+ L Sbjct: 478 DSLSKDKIKITS---------EHIAEVLAAWTGVPVTKLTESESERLLKLEEILHKRVIG 528 Query: 520 EGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDA 579 + + + L V Sbjct: 529 QDEAVVSLAKAV------------------------------------------------ 540 Query: 580 VSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFME 639 RR+R+G PNRPIGSF+FLGPTGVGKTEL K+L+ +F S++ M+RIDMSE+ME Sbjct: 541 -----RRARSGFKAPNRPIGSFIFLGPTGVGKTELAKSLSEALFSSEDNMIRIDMSEYME 595 Query: 640 KHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRL 699 HS+SRLVGAPPGYVGYEE G L+E VR++PYSV+L DE+EKAHP +FNILLQVLDDGRL Sbjct: 596 PHSISRLVGAPPGYVGYEEVGQLSEQVRQKPYSVVLFDEIEKAHPSIFNILLQVLDDGRL 655 Query: 700 TDGQGRTVDFRNTVVIMTSNLGSDLIQERFG---------ELDYAHMKELVLGVVSHNFR 750 TD GR +DF+NT++IMTSN+G + ++ + DY +++ ++ + +R Sbjct: 656 TDASGRVIDFKNTIIIMTSNVGVSELNDQKFVGFGGSDSIKNDYKNVQNTMMEALKKQYR 715 Query: 751 PEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDP 810 PEF+NRID+++VF L ++ + I+++ + L KRLE+R I ++ +A+ + E+G Sbjct: 716 PEFLNRIDDIIVFKTLEKEELEKISELLIDGLSKRLEDRNITIKLTKKAMAKIVEDGSIK 775 Query: 811 VYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855 YGARPLKR+IQ+ IE+ L++++L + G I ++ +D V Sbjct: 776 EYGARPLKRSIQKNIEDLLSEELLQNPELTG-TINIDYKKDSFVV 819 >UniRef50_A6V7C9 Type VI secretion ATPase, ClpV1 family n=10 Tax=Gammaproteobacteria RepID=A6V7C9_PSEA7 Length = 875 Score = 669 bits (1726), Expect = 0.0, Method: Composition-based stats. Identities = 313/826 (37%), Positives = 469/826 (56%), Gaps = 23/826 (2%) Query: 42 EGGSVSPLLTSAGINAGQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQ-K 100 G ++ L A ++AG+L + + + +LV+ L LA + Sbjct: 49 PQGLLARALQDAAVDAGELNAALQA-----RGEHSASRNPVFAPELVQWLQDALLLANLE 103 Query: 101 RGDNFISSELFVLAALESRGTLADILKAAGATTANITQ----AIEQMRGGESVNDQGAED 156 G + I +LA L + A +I + A+ Q G G + Sbjct: 104 LGRSQIDQAALILALLRNPLRYAGSRYQPLLARLDIERLKDFALSQPLEGAPSGKPGGGE 163 Query: 157 QRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIV 216 L+++T +LT++A GKLDPV+ RD IR+ + +L RR KNNP+++GE GVGKTAIV Sbjct: 164 --SLLQRFTHNLTQQARDGKLDPVLCRDGAIRQMVDILARRRKNNPIVVGEAGVGKTAIV 221 Query: 217 EGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILF 276 EGLA RI GEVP L+ +L+LDMG L AGA +GEFE RLKGV++++ ILF Sbjct: 222 EGLASRIAAGEVPPALRDVELLSLDMGLLQAGASVKGEFERRLKGVIDEVKAALRPTILF 281 Query: 277 IDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKV 336 IDE HT++GAG G DA N+LKPALARGEL + ATT EY++Y EKD AL RRFQ V Sbjct: 282 IDEAHTLIGAGGQAGGSDAANLLKPALARGELRTIAATTWAEYKKYFEKDPALARRFQPV 341 Query: 337 FVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDE 396 + EPSV + + ILRGL YE H + + D A+VAAA LS RY+A RQLPDKA+D++D Sbjct: 342 QLHEPSVAEAVTILRGLARVYEESHGIYLRDDAVVAAAELSARYLAGRQLPDKAVDILDT 401 Query: 397 AASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESD---EASKKRLDMLNEELSDKER 453 A + +R+ + + PE L+RL + + + ++QAL ++++ + L +L E L+ E Sbjct: 402 ACARVRISLAAAPESLERLRGELAEGERQRQALRRDAEAGLPIDHEALQVLEERLAQAES 461 Query: 454 QYSELEEEWKAEKASLSGTQTIKAELEQAKIA-IEQARRVGDLARMSELQYGKIPELEKQ 512 + LE++W ++ ++ +L +A+ A E+ D ++G + LEK Sbjct: 462 ERHVLEDQWSRQRELAERLLALRQQLARAREASREEQGGEADAEAFPADEHGGVEALEKA 521 Query: 513 LEAATQLEGKTM---RLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHR 569 L Q RL+ +V +AEV++ WTG+PV ++ K++ +L R Sbjct: 522 LHETRQALADAQAQGRLVSFEVCPRLVAEVISAWTGVPVEQLAREHNAKVVGFADDLRAR 581 Query: 570 VIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAM 629 + GQ +A+ A+ ++R + +GL P+ P G FL +GP+GVGKTE ALA+ ++ + + Sbjct: 582 IRGQEQAIRALDRSMRATASGLNKPDAPAGVFLLVGPSGVGKTETALALADLLYGGERFI 641 Query: 630 VRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNI 689 I+MSEF EKHSVSRL+GAPPGYVGY EGG LTEAVR++PYSV+LLDEVEKA PDV N+ Sbjct: 642 TTINMSEFQEKHSVSRLIGAPPGYVGYGEGGMLTEAVRQKPYSVVLLDEVEKADPDVLNL 701 Query: 690 LLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD---YAHMKELVLGVVS 746 Q+ D G DG+G +DFRNT+ +MTSNL S+ I + + +++ + V+S Sbjct: 702 FYQIFDRGVANDGEGHEIDFRNTLFLMTSNLASERIAALCRDGERPSPEILEDTIRPVLS 761 Query: 747 HNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSEN 806 +F+P + R+ VV ++P+G + + + I+L RL +RL R S + L E Sbjct: 762 QHFKPALLARM-RVVPYYPVGGRVLRELIGIKLDRLGERLARRHLAFDYSSALVDHLGER 820 Query: 807 GYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDR 852 GAR + + + +A ++L +++R+ D Sbjct: 821 CIQSDSGARLIDHLLDTHLLPLVADRLLQAMARDERLVRVHATLDE 866 >UniRef50_A6NVT1 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NVT1_9BACE Length = 858 Score = 667 bits (1722), Expect = 0.0, Method: Composition-based stats. Identities = 336/745 (45%), Positives = 473/745 (63%), Gaps = 15/745 (2%) Query: 121 TLADILKAAGATTANITQAIEQMRGGESVND-QGAEDQRQALKKYTIDLTERAEQGKLDP 179 T + K G + +Q E+ R E N+ + +R+ L+ Y I LT++A +GKLD Sbjct: 112 TFPFLNKLFGGSQGGDSQPREESRPREEKNNGKERAPKRKFLENYCISLTQKAAEGKLDN 171 Query: 180 VIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLA 239 ++GRD+EI RTIQ+L RR KNNP LIGEPGVGKTAI EGLA RI G+VP L+ + V Sbjct: 172 IVGRDQEIERTIQILNRRQKNNPCLIGEPGVGKTAIAEGLALRIHEGKVPYKLQDKEVYL 231 Query: 240 LDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNML 299 LD+ ALVAG ++RG+FE R+KG+++++ K+ GN+IL IDE+H +VGAG A+G+M+A N+L Sbjct: 232 LDLTALVAGTQFRGQFESRMKGLIDEV-KKLGNIILVIDEVHNIVGAGDAEGSMNAANIL 290 Query: 300 KPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYEL 359 KPAL+RGE+ +GATTL EYR+YIEKD+ALERRFQ V V EPS+ED + I+ G+K YE Sbjct: 291 KPALSRGEIQVIGATTLTEYRKYIEKDSALERRFQPVIVEEPSIEDAVQIIMGIKSYYEK 350 Query: 360 HHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRI 419 +H V I+ A T+S RYI DR LPDKAIDLIDEA S + + + E L + + Sbjct: 351 YHFVSISPEMARLAVTMSERYITDRYLPDKAIDLIDEACSDVNLHNANLAREAQ-LKKDL 409 Query: 420 IQLKLEQQALMKESDEASKKRLDML---NEELSDKERQYSELEEEWKAEKASLSGTQTIK 476 + E++AL+ E++ KR L ++ R+ ++L E++ A+ +K Sbjct: 410 EAISKEREALVAEANSRDFKRQSDLKANENRQAEIRRELNKLTEQYSVLSAAGDQEAGMK 469 Query: 477 -AELEQAKIAIEQARRVGDL----ARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKV 531 E EQA++ E + V D A + Y ++ ++ + Q K + Sbjct: 470 DNEREQARLQRELQKLVQDRSALNAATGDEDYQRLAVIKSRELQLQQELDKLEAQSAPPL 529 Query: 532 TDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGL 591 T A +A V+ WT IP S++ E+E E+L ++E L +IGQ++AV AV+ A+RR R G+ Sbjct: 530 TVAHLARVIELWTKIPASQIQEAEYERLAQLENRLKEHIIGQDDAVKAVAAAVRRGRVGI 589 Query: 592 ADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPP 651 A +P+ SF+F+G TGVGKTEL K LA MF S E+++R+DMSEFMEK +VSR++G+PP Sbjct: 590 ASKRKPV-SFIFVGSTGVGKTELVKRLAMDMFHSPESLIRLDMSEFMEKFAVSRIIGSPP 648 Query: 652 GYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRN 711 GYVGY+E G LTE VRR+PY VIL DE+EKAHPDV NILLQ+LDDG +TD QGR V+F N Sbjct: 649 GYVGYDEAGQLTEKVRRKPYCVILFDEIEKAHPDVLNILLQILDDGHITDAQGRNVNFEN 708 Query: 712 TVVIMTSNLGSDLIQE---RFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGE 768 TV++MTSN GS+ FG +E + + RPEFINR+DE+V F+ L E Sbjct: 709 TVIVMTSNAGSEAKGSGSVGFGRTAAEQGRERAMKALESFLRPEFINRVDEIVYFNKLSE 768 Query: 769 QHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENP 828 ++ +IA I L L L E+G D L L + Y YGAR L+R IQ+ +E+P Sbjct: 769 ENFKAIAGIMLGELKGTLAEKGITFTYDDSLLDYLVKKSYSLTYGARNLRRQIQKDLEDP 828 Query: 829 LAQQILSGELVPGKVIRLEVNEDRI 853 +A +I+ L P + + + + + Sbjct: 829 IATRIIESYLNPVRTLHASSDGETV 853 >UniRef50_Q88IA4 Chaperone-associated ATPase, putative n=14 Tax=Gammaproteobacteria RepID=Q88IA4_PSEPK Length = 878 Score = 666 bits (1719), Expect = 0.0, Method: Composition-based stats. Identities = 311/877 (35%), Positives = 468/877 (53%), Gaps = 52/877 (5%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +L + A A +L L + +E HL+ LL+ ++P+L + A +L+ Sbjct: 20 FAKLNETSRTATESAAALCLSEHHYEVEVEHLLLQLLDNNDSDLAPILRHYQVVAERLQA 79 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQ-KRGDNFISSELFVLAALES--- 118 + AL + G S + R++ LA + G + S + A L+ Sbjct: 80 QLVTALGTFKK--GNTRTPALSPHITRMIEQAWLLASIEYGVGQVRSAHLLQALLDDAEL 137 Query: 119 -RGTLADILKAAGATTANITQAIEQMRGGESVNDQG---------------AEDQRQALK 162 R +A + ++ + + G + + Q A + AL Sbjct: 138 RRVVIASAPELEKINADDLRLNLAALVEGSAESRQASPLASPAAPVSTSSKASGKTPALD 197 Query: 163 KYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQR 222 +YT++LT+ A +G++DPV+GR+ E+R+ + +L RR +NNP+L GE GVGKTA+VEGLA R Sbjct: 198 QYTVNLTQSAREGRIDPVLGREFEVRQMVDILTRRRQNNPILTGEAGVGKTAVVEGLALR 257 Query: 223 IINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHT 282 I G+VP LK + LD+G L AGA +GEFE RLK V+ ++ + +ILFIDE HT Sbjct: 258 IAQGDVPAVLKDVALHTLDLGLLQAGAGVKGEFENRLKAVIEEVKRSLHPIILFIDEAHT 317 Query: 283 MVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPS 342 ++G+G G DA N+LKPALARGEL + ATT EY++Y EKDAAL RRFQ V V EP Sbjct: 318 LIGSGGQAGQNDAANLLKPALARGELRTIAATTWAEYKKYFEKDAALARRFQVVKVEEPD 377 Query: 343 VEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIR 402 + I +LRGL + HH V + D A+V A LS+RYI RQLPDKA+ ++D A + I Sbjct: 378 EDKAIHMLRGLLGKMREHHKVAVMDEALVQAVRLSNRYITGRQLPDKAVSVLDTACARIA 437 Query: 403 MQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEW 462 + S P L+ R+I L+ E L E+ + E + L+ E Sbjct: 438 LAQSSLPGALEDCRRQIDNLQAEIDVLGHEAGKGHDHARR--------LESLQAALQAEQ 489 Query: 463 KAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGK 522 + E+ + Q +EQ K ++ L +L Sbjct: 490 QQEQQLNAQWQQELELVEQLKALDAANDAD----------AQQLNTLRAELARVQ----G 535 Query: 523 TMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSN 582 L+ V IA+V++ WTGIP+ +M+ E + + R+ L RV+GQ+ A+ + Sbjct: 536 DQPLVHALVDSGAIAQVISGWTGIPLGKMLRDEIDTVQRLPALLGERVLGQDHALHEIGK 595 Query: 583 AIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHS 642 I+ SRA + DPN+PIG FL LGP+GVGKTE ALA+ ++ + ++ I+MSE+ E H+ Sbjct: 596 RIKISRARMEDPNKPIGVFLLLGPSGVGKTETALALADTLYGGERNLITINMSEYQEAHT 655 Query: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702 VS L G+PPGYVGY EGG LTEAVRR+PYSV+LLDEVEKAHPDV + QV D G L DG Sbjct: 656 VSSLKGSPPGYVGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVLELFFQVFDKGVLDDG 715 Query: 703 QGRTVDFRNTVVIMTSNLGSDLIQERFGE----LDYAHMKELVLGVVSHNFRPEFINRID 758 +GR ++FRNTV+I+TSN G++ I + + E + ++H F+P F+ R+ Sbjct: 716 EGREINFRNTVIILTSNTGTERIMQTCLNATELPTPEAIVEDLRDQLNHVFKPAFLGRL- 774 Query: 759 EVVVFHPLGEQHIASIAQIQLKRLYKRL-EERGYEIHISDEALKLLSENGYDPVYGARPL 817 +V F+P+ +Q + I ++L+R+ KR E+ +K ++ + GAR + Sbjct: 775 SIVPFYPVQDQILERIVALKLERIAKRFARNHQAELSYDQALVKAIAARCTEVDSGARNI 834 Query: 818 KRAIQQQIENPLAQQILSGELV--PGKVIRLEVNEDR 852 + Q + LAQ++L P + + +E+ D Sbjct: 835 DNILSQTLMPELAQRVLERMAQDAPIQHLAIELGSDG 871 >UniRef50_D2TPV1 T6SS protein Cts2V n=1 Tax=Citrobacter rodentium ICC168 RepID=D2TPV1_CITRO Length = 835 Score = 666 bits (1717), Expect = 0.0, Method: Composition-based stats. Identities = 305/831 (36%), Positives = 454/831 (54%), Gaps = 26/831 (3%) Query: 5 RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDI 64 RL AL A + + F+EP HL+ ALL+ E ++ L AGI LR +I Sbjct: 9 RLNPVCLYALEQAAGRSRAQGHWFVEPEHLLLALLDDEHCDLACCLDGAGIPVDALRDEI 68 Query: 65 NQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLAD 124 +A ++ G S LV +L L R + S L +L L A Sbjct: 69 RRAQSQFRT--GCTRMPVFSAQLVELLEGALLLTTFRQLKQVRSALLLLTLLTRDRLRAQ 126 Query: 125 ILKAAGATTANITQAIEQM----------RGGESVNDQGAEDQRQALKKYTIDLTERAEQ 174 + + + +E + + A L +YT DLT A Q Sbjct: 127 LAQGLPLLLKISAEQLEDHWLNWCRGSAEAVSDRSDADAAVRGDSVLDQYTHDLTREARQ 186 Query: 175 GKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKG 234 G++DP+IGRD EIR+ I +L RR +NNP+L+G PGVGKTA+ EGLA RI G VP L+ Sbjct: 187 GRIDPIIGRDAEIRQCIDILLRRRQNNPILVGAPGVGKTAVAEGLALRIAEGSVPPPLRD 246 Query: 235 RRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMD 294 +L+LD+G L AGA +GEFE+RLKGV+ + K ++LFIDE HT++GAG A+G D Sbjct: 247 VALLSLDLGLLQAGAGVKGEFEQRLKGVIEAVKKSSQPIVLFIDEAHTLIGAGGAEGGSD 306 Query: 295 AGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLK 354 A N+LKPALARGEL + ATT EY++Y EKD AL+RRFQ++ + EP + + +LR + Sbjct: 307 AANLLKPALARGELRTIAATTWQEYKKYFEKDPALDRRFQRIHIEEPDEDSAVMMLRAVA 366 Query: 355 ERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDR 414 ++ E HH VQI D AI A LS RYI+ RQLPDKAI ++D A S + + P L+ Sbjct: 367 DKLEAHHGVQILDTAIREAVRLSQRYISGRQLPDKAISVLDTACSRVALAQHDIPPALEE 426 Query: 415 LDRRIIQLKLEQQALMKE--SDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGT 472 + +++ ++ E L +E RL L + + Q E+EE W+ E+ + Sbjct: 427 VRQQLATIEEESVRLNRELLVGIDHHDRLCDLEAQAKLLQLQAQEVEERWQDERQRVGEL 486 Query: 473 QTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVT 532 + + ++ + + + L +LE A + L+ + V Sbjct: 487 LAARQRMLALNARLDDEEELE-------QELVECAALIGKLETAAVQLRDEVPLVPDCVD 539 Query: 533 DAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLA 592 A +A V+ WTGIP+ +M+ E L + + + RV+GQ A++ ++ +R R+GL Sbjct: 540 AATVAAVIGGWTGIPIGQMLTDEAHALRTLVERMSERVMGQRAALETIARRLRAYRSGLT 599 Query: 593 DPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPG 652 DP +P+G FL +GPTGVGKTE ALA+ ++ + ++ I++SE+ E H+VS+L GAPPG Sbjct: 600 DPQKPVGVFLLVGPTGVGKTETAYALADALYGGERNLITINLSEYQEAHTVSQLKGAPPG 659 Query: 653 YVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNT 712 YVGY GG LTEAVRRRPYSV+LLDE+EKAHPDV V D G + DG G VDF+NT Sbjct: 660 YVGYGSGGALTEAVRRRPYSVVLLDEIEKAHPDVLEAFYNVFDKGVMEDGTGLIVDFKNT 719 Query: 713 VVIMTSNLGSDLIQERF-GELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHI 771 V++ TSN+G++LI E E + + + +FRP F+ R+ V + L E+ + Sbjct: 720 VMLATSNVGAELILETPTSEFNSEWFNTAMREELLRHFRPAFLARMT-TVAYRALDEETL 778 Query: 772 ASIAQIQLKRLYKRLE-ERGYEIHISDEALKLLSENGYDPVYGARPLKRAI 821 I +L++L +R G ++++ D ++ + + GAR ++ + Sbjct: 779 KGIVLAKLEKLAQRYLVATGEKLNMEDGLVERVMDQCKGV--GARDIENLV 827 >UniRef50_D1ZN19 Whole genome shotgun sequence assembly, scaffold_63 n=1 Tax=Sordaria macrospora RepID=D1ZN19_SORMA Length = 780 Score = 664 bits (1714), Expect = 0.0, Method: Composition-based stats. Identities = 333/727 (45%), Positives = 471/727 (64%), Gaps = 61/727 (8%) Query: 142 QMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNN 201 GG + GA++++ AL++Y IDLT RA GKLDP Sbjct: 70 HPPGGTHRMNLGADEEKPALEQYGIDLTARARDGKLDP---------------------- 107 Query: 202 PVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKG 261 GLA I+ G VPE +K +RV++LD+G+L+AGAK+RG+FEERLK Sbjct: 108 ----------------GLALEIVKGAVPESIKNKRVISLDLGSLIAGAKFRGDFEERLKK 151 Query: 262 VLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQ 321 VL ++ + G VILFIDELHT++G GKA+G++DA N+LKPAL+RGEL C GATTL+EYRQ Sbjct: 152 VLTEVQQANGEVILFIDELHTLLGLGKAEGSIDASNLLKPALSRGELQCCGATTLNEYRQ 211 Query: 322 YIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYI 381 IEKD AL RRFQ + V EP+VEDTI+ILRG+KE+YE+HH V+ITD A+VAAA S+RYI Sbjct: 212 -IEKDVALARRFQPILVNEPTVEDTISILRGIKEKYEVHHGVRITDGALVAAAAYSNRYI 270 Query: 382 ADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRL 441 DR LPDKAIDL+DEAASS+R+Q +SKP+++ RLD++I+ +++E ++L KE D AS +R Sbjct: 271 TDRFLPDKAIDLMDEAASSLRLQQESKPDDIQRLDQKIMTIQIELESLRKEKDVASVERR 330 Query: 442 DMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSEL 501 + L +L + + S L E+W+ EK+ + + +AEL++A+I +EQA+R G+ R SEL Sbjct: 331 EKLEADLKKFQDEVSVLTEKWEKEKSEIDKIKQTQAELDRARIELEQAQRTGNFGRASEL 390 Query: 502 QYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLR 561 ++G IP LEKQL + L+ + VT +IA V++R TGIP+ ++++ Sbjct: 391 RFGVIPNLEKQLPKDGERPTGDNTLIHDSVTADDIANVVSRITGIPILQVVQ-----RPH 445 Query: 562 MEQELH----HRVIGQNEAVDAVSNAIR---RSRAGLADPNRPIGSFLFLGPTGVGKTEL 614 E + H R+ + +SR +P+ I S P GVGKTEL Sbjct: 446 GETDPHGGHPPRICSRPRRGSEGGRRRSENAKSRTERREPSTGILSS-SSAPLGVGKTEL 504 Query: 615 CKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVI 674 CK LA F+F ++ A+VR DMSEF EKH++SRL+GAP GYVGYE+ G LTEAVRR+PY+V+ Sbjct: 505 CKKLAGFLFSTESAVVRFDMSEFQEKHTISRLIGAPSGYVGYEDAGQLTEAVRRKPYAVL 564 Query: 675 LLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDY 734 L DE EKAH D+ +LLQVLD+G LTD QG VDF+NT++++TSNLG+D++ + + Y Sbjct: 565 LFDEFEKAHRDISALLLQVLDEGYLTDAQGHKVDFKNTIIVLTSNLGADILVDANPLVPY 624 Query: 735 AHMKE---------LVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR 785 ++ V+ VV+ + PEF+NRID +VF L + + I I+L+ L +R Sbjct: 625 KETEDGDIHPDVKKAVMDVVASQYPPEFLNRIDSFIVFKRLALEALRDIVDIRLRELQER 684 Query: 786 LEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIR 845 L +R + + DE + L+E GYDP +GARPL R I +I N LA +I+ G++ G Sbjct: 685 LNDRRITLTVPDEVRQWLAERGYDPKFGARPLNRLITTEIGNGLADKIIRGQIKTGDNAV 744 Query: 846 LEVNEDR 852 +E+ ED+ Sbjct: 745 VEIKEDK 751 >UniRef50_A9BLL0 Type VI secretion ATPase, ClpV1 family n=46 Tax=Bacteria RepID=A9BLL0_DELAS Length = 928 Score = 663 bits (1711), Expect = 0.0, Method: Composition-based stats. Identities = 328/881 (37%), Positives = 483/881 (54%), Gaps = 49/881 (5%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +L +L A N ++E +H + LL + + +L I + +L Sbjct: 25 FGKLNPLLFKSLEGATVFCKLRGNPYVELVHWLHQLLQENDCDLIRILRHFDIASDRLAA 84 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKR-GDNFISSELFVLAALESRGT 121 D+ + L++LP+ + D S+ + + A D+ I S + + +R + Sbjct: 85 DVLRRLDQLPRGATSISD--FSEHIETAIERGWVYATLMFNDSQIRSAYLLSGMVRTR-S 141 Query: 122 LADILKAAGATTANITQA-------------------------IEQMRGGESVNDQGAED 156 LA+ L++ I++ +E G S A Sbjct: 142 LANELRSISREFDKISEPALSDAFARLLPDSPEARMRAADGSGLEGTPGEASQATGAAPG 201 Query: 157 QRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIV 216 Q AL++YT+DLT RA+ G+LDPV GRD+E+R+ + +L RR +NNP+L+GE GVGKTA+V Sbjct: 202 QGGALQQYTVDLTARAKAGELDPVTGRDDEVRQMVDILLRRRQNNPILVGEAGVGKTAVV 261 Query: 217 EGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILF 276 EGLA RI G+VP L+G + LD+G L AGA +GEFE RL+G+L+ + ++LF Sbjct: 262 EGLALRIAQGDVPPPLQGVELRVLDVGLLQAGASMKGEFENRLRGLLDAVQSSTTPIVLF 321 Query: 277 IDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKV 336 IDE+HT+VGAG G DA N+LKPALARG L +GATT EY++YIEKD AL RRFQ V Sbjct: 322 IDEVHTLVGAGGQAGTGDAANLLKPALARGTLRTIGATTWAEYKKYIEKDPALTRRFQLV 381 Query: 337 FVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDE 396 V EP + +LRG+ + E HH V+I A+ AA +LSHRYI RQLPDKA+ L+D Sbjct: 382 QVHEPDEPRAVDMLRGVAAKLENHHQVRIAADAVAAAVSLSHRYIPSRQLPDKAVSLLDT 441 Query: 397 AASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKES--DEASKKRLDMLNEELSDKERQ 454 A S + M + + P +L+ + RRI L +EQ+ L++E+ + +RL L +L+ + Sbjct: 442 ACSRVAMALHATPAQLEAVQRRIEALGVEQEVLLREAALGLPTAERLQALETDLASLRER 501 Query: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGK--------- 505 + L E + E A +A L K + D + + + Sbjct: 502 QATLAERFGQESALARRILETEAALMGLKPPVFSTGAATDPSAAAPETAAEATATEPAEP 561 Query: 506 --IPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRME 563 + LE +L+G LL+ V +A V+A WTGIPV RM+ E + +L + Sbjct: 562 PSVATLEALRRQLAELQGDA-PLLQPVVDAGVVAAVVAEWTGIPVGRMVRDEVQSVLSLA 620 Query: 564 QELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMF 623 L RVIGQ ++A++ I+ SRA L DP +PIG FL GP+GVGKTE +LA ++ Sbjct: 621 DTLEKRVIGQRHGLEAITRRIQTSRARLDDPGKPIGVFLLAGPSGVGKTETALSLAEALY 680 Query: 624 DSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAH 683 ++ ++ I+MSEF E H+VS L GAPPGYVGY EGG LTEAVRRRPYSV+LLDE+EKAH Sbjct: 681 GGEQNLITINMSEFQEAHTVSTLKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDEIEKAH 740 Query: 684 PDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLG 743 DV + QV D G + DG+GR +DF+NTV+I+TSN+GSDLI + D A E + Sbjct: 741 SDVHEMFFQVFDKGWMEDGEGRYIDFKNTVIILTSNVGSDLIANMCRDPDLAPTPEGLAQ 800 Query: 744 VVS----HNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEER-GYEIHISDE 798 V F + R+ VV ++P+ + + I ++Q+ R+ +R+EER G + + Sbjct: 801 AVRQPLLQTFPAALLGRLT-VVPYYPISDAMLEQIIRLQMLRIQRRIEERHGAQFSFDEA 859 Query: 799 ALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELV 839 A+ L+ + GAR + + Q + +A L + Sbjct: 860 AVDLVRRRCSEVESGARMVDGILTQNLLPRMATHFLQATVE 900 >UniRef50_D2QJP1 ATPase AAA-2 domain protein n=12 Tax=Bacteria RepID=D2QJP1_9SPHI Length = 828 Score = 663 bits (1710), Expect = 0.0, Method: Composition-based stats. Identities = 312/861 (36%), Positives = 480/861 (55%), Gaps = 54/861 (6%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 MR LT + AL A++LA + N+ + HL+ A+L+ + G S LL + + + Sbjct: 1 MRQLPLTEPVEKALHIARALAREYHNEQLTAAHLLRAVLHDDVGG-SALLRALDQDVAYI 59 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALE-SR 119 + + P+ + + + RVLN D K G +++ + A + Sbjct: 60 FDWADVWIEEQPRSALAITEPLQDESVERVLNEADFFRVKLGLDYVELICVLTALTKPGV 119 Query: 120 GTLADILKAAGATTANITQAIEQMRGGESVNDQ-----GAEDQRQALKK-----YTIDLT 169 G A+ L++ ++ + D+ + LK Y ID T Sbjct: 120 GFTAEQLRSFPLQERDLLDRFLRDLSTPRATDKTSSNGNGQAALPGLKTKGQFPYCIDKT 179 Query: 170 ERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVP 229 +A KLDPV+GR +E+R +++L RR+K N +++G+PGVGK+A+++GLAQ I+ G+VP Sbjct: 180 AQARAKKLDPVVGRKQEVRTMLEILGRRSKPNVMVVGDPGVGKSALLDGLAQLIVEGQVP 239 Query: 230 EGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKA 289 +K +L LD GAL+AGA Y+GE E+RLK VL ++ +QE ILFIDE+HT++ K Sbjct: 240 ARMKNAILLELDSGALLAGASYKGEVEDRLKSVLKEVRQQE-MCILFIDEIHTLLD-PKG 297 Query: 290 DGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAI 349 N+LKP LARGEL VGATTL+EYR+ IE D AL RRF+ + V EP+ + + Sbjct: 298 SAGNGIANLLKPELARGELTVVGATTLEEYRKLIEPDQALSRRFELLNVTEPTEQVAERM 357 Query: 350 LRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKP 409 +RGL YE HH ++I + A L+ RY +R+LPD A+DL+D ++IR+ I++ Sbjct: 358 IRGLIPVYEQHHKLEIQPDVVAACIRLARRYSKERRLPDSALDLLDRTMAAIRIAIETSE 417 Query: 410 EELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASL 469 EL +L++ + +L L + E ++ + + + L Sbjct: 418 TELTQLEKAVQELS-----------------QSDLPPGEALDEYRWIDTQLHHQISPVLL 460 Query: 470 SGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRN 529 + LE A + L R EL ++P Sbjct: 461 GNWEDTINPLEIETPAAYHDYIMAKLRRFRELAGQQVP---------------------- 498 Query: 530 KVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA 589 VT ++ V+A TGIP+ ++ E+E+LL ME L RV+GQN A+ A+S+AI SR+ Sbjct: 499 VVTANDLVAVVAHKTGIPMGKVQGQEKERLLSMESFLQRRVVGQNHALRALSDAILESRS 558 Query: 590 GLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGA 649 GL +PIGSF LGPTG GKTEL K+LA+F+F+ + A++R DMSEF E+HS + L GA Sbjct: 559 GLQRAGQPIGSFFLLGPTGTGKTELSKSLADFLFNDERALIRFDMSEFKEEHSAALLYGA 618 Query: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709 PPGYVGYEEGG L +R++PYSV+L DE+EKAH VF++ LQ++D+GRL D G+ DF Sbjct: 619 PPGYVGYEEGGLLVNKIRKQPYSVVLFDEIEKAHGSVFDVFLQIMDEGRLHDKLGKEGDF 678 Query: 710 RNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQ 769 N ++I TSN+ S+ I F ++L + ++ FRPEF+ RI E++ F P+ E+ Sbjct: 679 TNALLIFTSNISSEWITNEFQAGRMPTSQQL-MTRMTGQFRPEFLARITEIIPFSPIQEE 737 Query: 770 HIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPL 829 ++ I +IQL L K L ++G + ++ EA + L+ G+ P YGARPL I+ Q+ P+ Sbjct: 738 NVVRIFEIQLAHLQKSLVQQGVTLTLTKEANRQLALQGFSPHYGARPLAGIIRNQLRRPI 797 Query: 830 AQQILSGELVPGKVIRLEVNE 850 ++ ++SG+L G+ + L+ NE Sbjct: 798 SRLLISGQLQKGQSLNLDWNE 818 >UniRef50_C4GNT2 ClpB protein n=23 Tax=Yersinia RepID=C4GNT2_YERPN Length = 867 Score = 662 bits (1708), Expect = 0.0, Method: Composition-based stats. Identities = 301/879 (34%), Positives = 476/879 (54%), Gaps = 57/879 (6%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +RL +A L + ++++E H + L++Q+ G + LLT G++ + T Sbjct: 13 FNRLGTFAYKTFVEATRLCRSYRHEYVELEHWLKILMDQQRGDIPALLTHYGLSQTVIST 72 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGD-NFISSELFVLAALESRGT 121 +++ + +P + + D+ S L V+ L+Q + I + +LA L+ Sbjct: 73 QLDRIIQHMPVTKASVQDL--SSRLESVVEGGLVLSQLMASPSPIRTSHILLALLQDTQH 130 Query: 122 LADIL----------------KAAGATTANITQAIEQMRGGESVNDQGAEDQRQA---LK 162 + + G +I Q E RG V + + ++A L Sbjct: 131 QRWLYRLCDEFKKLPVPQVAEEYEGLLVNSIEQTSEVQRGDALVTETDSSSSKEAHAALN 190 Query: 163 KYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQR 222 K+ DLT++A G++DPVIGR+ E+R+ I +L RR +NNP+L+GE GVGKTA+VE LA++ Sbjct: 191 KWCNDLTQQARDGEIDPVIGREAELRQVIDILLRRRQNNPILVGEAGVGKTAVVEALARK 250 Query: 223 IINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHT 282 + +G+VP L+G R+L+LD+G + AGA RGEFE RLK +++ +++ + VILF DE HT Sbjct: 251 LASGDVPPLLQGARLLSLDLGRMQAGASMRGEFESRLKSLIDGISQSDTPVILFCDEAHT 310 Query: 283 MVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPS 342 +VGAG G DA N+LKP LARG L + ATT EY+Q+IE DAAL RRFQ+V + EP+ Sbjct: 311 LVGAGGQAGTGDAVNLLKPMLARGALRMIAATTWSEYKQFIEPDAALTRRFQRVLIGEPN 370 Query: 343 VEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIR 402 + +LR + + HH+V I D AI AA LS R + RQLPDKAI L+D A + + Sbjct: 371 ESTAVDMLRAIAPHFAQHHNVTIRDGAIHAAVRLSLRNLPSRQLPDKAISLLDTACARVA 430 Query: 403 MQIDSKPEELDRLDRRIIQLKLEQQALMKESD--EASKKRLDMLNEELSDKERQYSELEE 460 + ++P+ +++L ++ LK E Q L++E EA +RLD + ++ E + + L+ Sbjct: 431 LSQYAQPQAIEQLSAQLDVLKTEHQYLVREKQLGEAVDQRLDDVQTQIQAFEHELTALQS 490 Query: 461 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 520 E+ + + + E E + + E AR +G++ L+ Sbjct: 491 RHLHEQQLV---REVLPEGEGSGMMTENAR------------WGELMALQ---------- 525 Query: 521 GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAV 580 + L+ V + IA VL+ WTGIP +M++ + E +L +EQ L + GQ A+ + Sbjct: 526 -EASPLVYPWVDEQSIAAVLSDWTGIPSGKMLQDDIECVLNLEQRLGDHIFGQRNAIKEI 584 Query: 581 SNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEK 640 S AIR +RAG+ RP+G FL G TG GKTE L ++ ++ +MSEF E Sbjct: 585 SQAIRIARAGIQSQERPLGIFLLAGSTGTGKTETANVLVETLYGGAHNLITFNMSEFQEA 644 Query: 641 HSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLT 700 H++S L GAPPGYVGY +GG LTEAVRR+PYSVILLDE +KAH D+ + QV D G + Sbjct: 645 HTLSTLKGAPPGYVGYGKGGKLTEAVRRKPYSVILLDEFDKAHADIQDAFYQVFDKGWME 704 Query: 701 DGQGRTVDFRNTVVIMTSNLGSDLIQERF---GELDYAHMKELVLGVVSHNFRPEFINRI 757 D +GR V FR +++T N G++ I++ + ++ +K LV + F P + R+ Sbjct: 705 DAEGRRVSFRQCFILLTCNQGAEEIEQAYLTANDIKPGALKPLVYDALLRRFAPALLARV 764 Query: 758 DEVVVFHPLGEQHIASIAQIQLKRLYKRLE-ERGYEIHISDEALKLLSENGYDPVYGARP 816 + ++ + PL + +A IA L RL RL E G + + ++ R Sbjct: 765 N-IIPYIPLDQDALAQIASHHLARLQTRLWDEIGATLVTEGDIPGWIASRVCSHPNHGRA 823 Query: 817 LKRAIQQQIENPLAQQILS--GELVPGKVIRLEVNEDRI 853 ++ ++Q + + ++L E P + IRL V E + Sbjct: 824 VEELLRQTLLPAVGNEVLKRRHEAEPLREIRLIVEETEL 862 >UniRef50_C5ZYU5 ATP-dependent Clp protease subunit n=2 Tax=Proteobacteria RepID=C5ZYU5_9HELI Length = 876 Score = 661 bits (1705), Expect = 0.0, Method: Composition-based stats. Identities = 303/878 (34%), Positives = 484/878 (55%), Gaps = 47/878 (5%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +L+ AL A L N ++E H ++ L+ +E S ++ ++ ++ Sbjct: 10 FSKLSKISYQALESATILCKNRGNSYVELAHWINQLMLEENTDCSYIVDFFELDKNKITK 69 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGD-NFISSELFVLAALESRGT 121 D+ L++LP+ + D S D+ + ++ D + I S +LA ++ Sbjct: 70 DLISYLDKLPKGSSSIED--FSNDIELAIKEAWMISSIVFDFDKIRSGSLLLALKQNSNL 127 Query: 122 LADIL----------------KAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYT 165 ++ + K T ++ + + L YT Sbjct: 128 ISKLHDMSHEFIKINADVLQDKFKEITKGSVEVNESYSNVSNATKSDPNLNNNDVLSLYT 187 Query: 166 IDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIIN 225 IDLT++A++GK+D ++GRD+EIR+ I +L RR +NNP+L GE GVGKTAI EGLA R+ Sbjct: 188 IDLTQKAKEGKIDEIVGRDKEIRQAIDILIRRRQNNPILTGEAGVGKTAIAEGLAVRLAK 247 Query: 226 GEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVG 285 EVP LKG + +LD+G L AGA +GEFEERLK V+ + +ILFIDE HT++G Sbjct: 248 NEVPSILKGYVLRSLDIGLLQAGASMKGEFEERLKKVIEAVQNSSTPIILFIDEAHTLIG 307 Query: 286 AGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVED 345 AG G DA N+LKPALARGEL C+ ATT EY +Y EKD AL RRFQ + V EP E Sbjct: 308 AGGTAGQNDAANLLKPALARGELRCLAATTWQEYIKYFEKDPALSRRFQNISVEEPDDEK 367 Query: 346 TIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQI 405 I ++R + + E HHV IT+ AI+A+ LS RY+ R+LPDK+ ++D A++ + + Sbjct: 368 CIQMMRSIAKSLEKFHHVTITNEAIIASVKLSRRYLPSRKLPDKSTSILDTASARVALSQ 427 Query: 406 DSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRL--DMLNEELSDKERQYSELEEEWK 463 S PE L+ L ++I +LE++ L++E E +++ EL E++ LE ++ Sbjct: 428 SSMPESLEILIKKIESKQLEKEILLREEREGIDHSESLKLIDMELVKLEQEKQSLEAKFD 487 Query: 464 AEKASLSGTQTIKAEL--EQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEG 521 EK ++ + ++ +L EQ + +E+ + + +R GKI +++ + Sbjct: 488 KEKEAIQEYKELRTKLLNEQDENELEKFKEKLNDSR------GKIAQIQGE--------- 532 Query: 522 KTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVS 581 ++ V IA +++ WTGIP+ RM++ E + +L +E+EL +IGQN ++ ++ Sbjct: 533 --NPMILPVVDAQAIAAIISEWTGIPLGRMIKDEAKSILALEEELAKNIIGQNHSLSLIA 590 Query: 582 NAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKH 641 +I ++A LADP +P F+ GP+GVGKTE ++A ++ S + ++ I+MSEF E H Sbjct: 591 KSIITAKANLADPQKPQAIFMLAGPSGVGKTETALSIAQMVYGSRDNIITINMSEFQEAH 650 Query: 642 SVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTD 701 +VS L GAPPGYVGY EGG LTEAVR++PYSVILLDE+EKAH D+ I QV D GR+ D Sbjct: 651 TVSTLKGAPPGYVGYGEGGVLTEAVRKKPYSVILLDEIEKAHHDIHEIFFQVFDKGRMED 710 Query: 702 GQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAH---MKELVLGVVSHNFRPEFINRID 758 G GR VDFRNT++I+T+N+G I + + +Y ++ + V+ F + R+ Sbjct: 711 GAGRLVDFRNTIIILTTNVGDSEIFDLCEDGNYPKPEILERAIRPVMQKVFPAALLGRL- 769 Query: 759 EVVVFHPLGEQHIASIAQIQLKRLYKRLEE-RGYEIHISDEALKLLSENGYDPVYGARPL 817 VV ++PL ++ + I ++L+++ +R++E E + + GAR + Sbjct: 770 VVVPYYPLNKEALHKIIDLKLQKIIQRIQEYYKAEFAYDVSLKDEIMTRCNNIASGARMI 829 Query: 818 KRAIQQQIENPLAQQILSGELVPGKVIRL--EVNEDRI 853 I +I ++ + L L K+ ++ EV I Sbjct: 830 DAIINNEILPNISIKFLQNNLETKKISKVFLEVKNGEI 867 >UniRef50_A9FKV2 Endopeptidase Clp n=6 Tax=Proteobacteria RepID=A9FKV2_SORC5 Length = 901 Score = 657 bits (1694), Expect = 0.0, Method: Composition-based stats. Identities = 309/897 (34%), Positives = 479/897 (53%), Gaps = 67/897 (7%) Query: 5 RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDI 64 RLT AL A + + + HL+ ALL+ ++ L++ ++ LR + Sbjct: 15 RLTKNCTSALEAAIGQCVNARHYEVTLEHLLLALLDDANSDIAFLVSHYDLDPSHLRAAL 74 Query: 65 NQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKL-AQKRGDNFISSELFVLAALESR---- 119 ++L L + G G S ++ + + + + G + S + ++ Sbjct: 75 QRSLEELRK--GNAGRPVLSPTMLEWMQDAYLVGSMEYGYQRVRSGVLFQRLVQQPTRYS 132 Query: 120 -GTLADILKAAGATTANITQAIEQMRGGESVN--------------------DQGAEDQR 158 ++ L+ G + ++ + ++ G + Sbjct: 133 VSSIGAYLE--GISKDDLKNNLPKIVSGSKEEAEAAAAAAGAGAPGAGKLPAGMASAGPD 190 Query: 159 QALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEG 218 AL K+ +D T +A G++DP+ GR+ EIR+ I +L RR KNNP+++G+ GVGKTA+VEG Sbjct: 191 SALAKFCVDYTGKARAGQIDPIFGREREIRQVIDILARRRKNNPIIVGDAGVGKTALVEG 250 Query: 219 LAQRIING-----EVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNV 273 LA I+ +VP L+G +L LDMG L AGA +GEFE R+K V+ ++ + Sbjct: 251 LALLIVESTPENPKVPPLLQGVDILGLDMGLLQAGAGVKGEFENRMKQVIAEVKGSSKPI 310 Query: 274 ILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRF 333 ILFIDE HT++GAG G DA N+LKPALARGEL + ATT EY++Y EKDAALERRF Sbjct: 311 ILFIDEAHTLIGAGGQQGGGDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALERRF 370 Query: 334 QKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDL 393 Q V V EPS + +LRGL+ ++E+ H+V I D A+ AA LS RY+ RQLPDKA+DL Sbjct: 371 QPVKVDEPSEPAAVVMLRGLRPKFEVAHNVIIQDEAVTAAVRLSARYLTGRQLPDKAVDL 430 Query: 394 IDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKER 453 +D A+ +++ + +P ++ + I+ + E +AL ++ D E Sbjct: 431 LDTCAARVKVALQQRPSAVEDAEILIVNTETELKALERDRDRGVHID-----------EE 479 Query: 454 QYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQL 513 + S L++ K L + A+ + AR+ D A+ SE + E+ K L Sbjct: 480 RVSALKDRLAKAKTELETVRAAYAKETAGTQRVIDARKKMDEAKTSEERDAARREVVKAL 539 Query: 514 EAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQ 573 + Q +G+ + L+R V +A +A V+A WTGIPV +M++ + + LL ME L R+ GQ Sbjct: 540 DELKQSQGE-VPLVRPDVDEAMVASVVAAWTGIPVGKMVQDDVKALLEMEDRLTRRIKGQ 598 Query: 574 NEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRID 633 + +S +R +RAGL + P G FL +GP+GVGKTE +A+ MF + M I+ Sbjct: 599 THGIVTISKELRSARAGLKPLSTPQGVFLLVGPSGVGKTETALGIADLMFGGERMMTVIN 658 Query: 634 MSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQV 693 MSEF EKH+VSRL+G+PPGYVGY EGG LTEAVR+RPY+V+LLDEVEKA PDV N+ QV Sbjct: 659 MSEFQEKHTVSRLIGSPPGYVGYGEGGMLTEAVRQRPYTVVLLDEVEKADPDVMNLFYQV 718 Query: 694 LDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERF--------------GELDYAHMKE 739 D G L+DG+GR VDF+NTV+I+TSNL +D I + E Sbjct: 719 FDKGMLSDGEGRLVDFKNTVIILTSNLATDKITNMTVAAREEDPSRRLDADGEFIKEIVE 778 Query: 740 LVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEE-RGYEIHISDE 798 + +S +F+P + R+ V + P+ + I +++L L RL + + E SD Sbjct: 779 SIKPTLSAHFKPALLARMT-TVPYLPISPDALGEITRLKLDALVDRLRKSQRIEASYSDA 837 Query: 799 ALKLLSENGYDPVYGARPLKRAIQQQIENPLA----QQILSGELVPGKVIRLEVNED 851 ++ ++ + GAR + ++ + L+ +++ G L I ++ ++ Sbjct: 838 LVETIAARCTEVDTGARNIDHILRASLLPLLSVAVLEKMAEGPLPKRLQIGVDAEKN 894 >UniRef50_A9BF41 ATPase AAA-2 domain protein n=14 Tax=cellular organisms RepID=A9BF41_PETMO Length = 830 Score = 655 bits (1690), Expect = 0.0, Method: Composition-based stats. Identities = 338/872 (38%), Positives = 492/872 (56%), Gaps = 95/872 (10%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 D T + +AQ+ A + ++ H++ LL GG + + + ++ Sbjct: 1 MFDNFTERAAKVFIEAQNEAKQMGHPYVGTEHILLGLLKVGGGHLDTVFEEFNLYYNSIK 60 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAA-LESRG 120 +I + +G G QP+ R+L L ++ G N I +E +L E+ G Sbjct: 61 MEITNVVGTN-STQGIIGSPQPTPRAKRILELAYDESELMGFNKIDAEHLLLGICREAEG 119 Query: 121 TLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKK--------------YTI 166 + ILK +G + + + M + + + L++ Y Sbjct: 120 IASHILKRSGINLTLMRKELTDMMIKGRSTGRMEIAKTEELEERKRQKQNALKQLEEYGT 179 Query: 167 DLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIING 226 DLT +AE KLDP+IGR+ EI R +++L RR KNNPVLIGE GVGK+A+VEGLAQRI+ G Sbjct: 180 DLTAQAENRKLDPIIGREIEINRIMEILARRKKNNPVLIGEAGVGKSAVVEGLAQRIVEG 239 Query: 227 EVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGA 286 VPE LK + + +LD+ ++VAG KYRGEFE+R+K ++ L K E ++ILFIDELH +V A Sbjct: 240 RVPEILKNKTIFSLDITSIVAGTKYRGEFEKRMKKLMQILQKTE-DIILFIDELHMIVEA 298 Query: 287 GKADGA-MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVED 345 G A+G+ MDA N+LKPALA GE+ +G+TT +EYR++IE +P++E Sbjct: 299 GAAEGSSMDAANVLKPALANGEITVIGSTTANEYRKFIE--------------KDPALER 344 Query: 346 TIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQI 405 + +T+P I + + + + Sbjct: 345 -------------RFQKIYVTEPTIEETINI-------------------LSGIKFKYEE 372 Query: 406 DSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAE 465 K + + +QL + D+A + KA Sbjct: 373 HHKVKYNHGAIQSAVQLSVRYITDRHLPDKAIDVIDE-----------------AGAKAR 415 Query: 466 KASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMR 525 ++L+ +K + E+ IE R + E + K+ E ++ + + E + Sbjct: 416 LSALTLPDKLKIQYEKI-ADIESKRNDPNSKENVEEKLKKMKEKYEEEYSKWRSEAENKI 474 Query: 526 LLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIR 585 + ++T+ +IAE+++ WTG+P+ ++ E EKLL +E LH RV+GQ+EA+ +V+ AIR Sbjct: 475 I---QITEEDIAEIISNWTGVPLRQLRAEEMEKLLNLEAVLHERVVGQDEAIKSVAKAIR 531 Query: 586 RSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSR 645 R+R+GL DP RP G F+FLGPTGVGKTEL K LA ++F ++ +VRIDMSE+MEK SVSR Sbjct: 532 RARSGLKDPRRPTGVFMFLGPTGVGKTELAKTLATYLFGNETHLVRIDMSEYMEKFSVSR 591 Query: 646 LVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGR 705 LVGAPPGYVGY+EGG LTE VRRRPYSVILLDE+EKAH DV+NILLQ++D+GRLTD QGR Sbjct: 592 LVGAPPGYVGYDEGGQLTEIVRRRPYSVILLDEIEKAHTDVYNILLQIMDEGRLTDSQGR 651 Query: 706 TVDFRNTVVIMTSNLGSDLI----------QERFGELDYAHMKELVLGVVSHNFRPEFIN 755 TVDFRNT++IMTSNLGS+ I +E E +Y +KE V+ V F+PEFIN Sbjct: 652 TVDFRNTIIIMTSNLGSEQISKTKRSLGFVEEGTIESEYKDIKEQVMSAVKAAFKPEFIN 711 Query: 756 RIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGAR 815 R+D+V+VFHPL + + +I IQL L RLEER + + + A+ L E GYD V+GAR Sbjct: 712 RLDDVIVFHPLTKNQLKNIISIQLSDLKSRLEERNLTLSVKESAIDFLLEKGYDSVFGAR 771 Query: 816 PLKRAIQQQIENPLAQQILSGELVPGKVIRLE 847 PLKRAIQ+ IE+PL++++L G+ G I + Sbjct: 772 PLKRAIQRYIEDPLSEELLKGKYEEGDKILVT 803 >UniRef50_B2RGN2 ATP-dependent Clp protease ATP-binding subunit ClpC n=34 Tax=Bacteroidetes RepID=B2RGN2_PORG3 Length = 859 Score = 654 bits (1686), Expect = 0.0, Method: Composition-based stats. Identities = 328/913 (35%), Positives = 484/913 (53%), Gaps = 125/913 (13%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 T F+ +L + A + L+ ++ ++ GIN +L+ I Sbjct: 5 FTQTFRNSLEYSYQEATRLGVVAVTQDMLVLGIIRDGDNGAIDIMRHYGINLYELKRLIE 64 Query: 66 QALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES--RGTLA 123 G + ++ + D +S +L+ L S + Sbjct: 65 LEAIAESLPASPEGLPIFTPSAREAIDDATDICADMEDEAVSPVHLLLSILNSTQESLVQ 124 Query: 124 DILKAAGATTANITQAIEQMRGGESVNDQGAED--------------------------- 156 I G I R + Sbjct: 125 KIFMKQGIKYDTILSDYFGQRNPSEGKSPSEMEILDGYQDNDFDDEEDESSPPSGNSGTG 184 Query: 157 ------------------------QRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQ 192 AL + D+T A GKLDPV+GR++EI R IQ Sbjct: 185 GGSGDAPEQNTGGGDTTTTTRSGGDTPALDTFGTDITAMAAAGKLDPVVGREQEIERVIQ 244 Query: 193 VLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYR 252 +L RR KNNPVLIGEPGVGK+AIVEGLA+RI+N +V L +R+++LD+ +VAG KYR Sbjct: 245 ILSRRKKNNPVLIGEPGVGKSAIVEGLAERIVNRKVSRILFDKRIISLDLAQMVAGTKYR 304 Query: 253 GEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVG 312 G+FEERLK VL++L K +ILFIDE+HT+VGAG A G+MD NMLKPALARG++ C+G Sbjct: 305 GQFEERLKAVLDELKKNP-QIILFIDEIHTIVGAGSAAGSMDTANMLKPALARGQVQCIG 363 Query: 313 ATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVA 372 ATTLDEYR+ IEKD ALERRFQKV +A + E+T+ IL+ +KE+YE +H V+ TD AI A Sbjct: 364 ATTLDEYRKNIEKDGALERRFQKVPIAPSTAEETLTILQNIKEKYEDYHGVRYTDEAIKA 423 Query: 373 AATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKE 432 A L+ RY++DR PDKAID +DEA +S+ + P+E++ L+ + ++ + + +K Sbjct: 424 AVELTDRYVSDRFFPDKAIDAMDEAGASVHITNVVAPKEIEILEAELASVRENKLSAVKA 483 Query: 433 SDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRV 492 + ++ ++Q +E +++W+ + + T Sbjct: 484 QNYELAASF---RDQERRTQQQIAEEKKKWEEQMSKHRET-------------------- 520 Query: 493 GDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMM 552 + E + L + A G+ RL M Sbjct: 521 -----VDENVVAHVVALMTGVPAERLSTGEGERL----------------------RTMA 553 Query: 553 ESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKT 612 + + K++ + + V AI+R+R GL + +PIGSFLFLGPTGVGKT Sbjct: 554 DDLKTKVVGQDTAIEKMV-----------RAIQRNRLGLRNEKKPIGSFLFLGPTGVGKT 602 Query: 613 ELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYS 672 L K LA ++F+ + AM+R+DMSE+MEK SVSRLVGAPPGYVGYEEGG LTE VRR+PYS Sbjct: 603 YLAKKLAEYLFEDENAMIRVDMSEYMEKFSVSRLVGAPPGYVGYEEGGQLTERVRRKPYS 662 Query: 673 VILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQ------ 726 V+LLDE+EKAH DVFN+LLQV+D+G+LTD GR V+F+NTV+I+TSN+G+ ++ Sbjct: 663 VVLLDEIEKAHADVFNLLLQVMDEGQLTDSLGRRVNFKNTVIIITSNVGTRQLKDFGQGI 722 Query: 727 ----ERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRL 782 E+ E + H + ++ ++ F PEF+NR+D++++F LG+ I + I+LK + Sbjct: 723 GFRSEKDEEANKEHSRSVIQKALNKTFSPEFLNRLDDIILFDQLGKTEIRRMVDIELKAV 782 Query: 783 YKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGK 842 R+ GY++ ++DEA +++ GYD YGARPLKR +Q ++E+ L ILSG++ G+ Sbjct: 783 LARIHRAGYDLVLTDEAKDVIATKGYDLQYGARPLKRTLQNEVEDRLTDLILSGQIEKGQ 842 Query: 843 VIRLEVNEDRIVA 855 + L + I+ Sbjct: 843 TLTLSARDGEIIV 855 >UniRef50_C2BFB3 ATP-binding ClpB chaperone n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BFB3_9FIRM Length = 843 Score = 652 bits (1681), Expect = 0.0, Method: Composition-based stats. Identities = 295/858 (34%), Positives = 491/858 (57%), Gaps = 24/858 (2%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M + + + + +A +A+ +N + LH+ A+L E + + + Sbjct: 1 MDISKYSQSSVEIIKEANKVAIRKNNVEVSDLHIFYAILTLEEKLIRTYFKELKVIYQDV 60 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL-ESR 119 D AL +L +G + S+ R L + +++++ + + I +E +LA L E+ Sbjct: 61 LDDTENALTKLRSAKGIS-SLYTSRSYQRALLIAEEISRNQFEEKIKTEHLMLALLREAD 119 Query: 120 GTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDP 179 A + G T N + + + + E + ++ L+KY LT+ A +G+LDP Sbjct: 120 MPTAKLAATHGLTYKNFNELVAK-KFNEYLLKGVDQETIINLEKYGTVLTKEAIEGRLDP 178 Query: 180 VIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLA 239 VIGR+EE R I++L RR KNNPVLIG+ GVGKTAIVEG+ QRI+ G+VP+ LK + + + Sbjct: 179 VIGREEETRTAIRILSRRIKNNPVLIGDAGVGKTAIVEGIVQRIVAGDVPDDLKDKIIFS 238 Query: 240 LDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNML 299 LDM +LVAGAKYRG+FEERLK +L + +G +ILFIDE+H ++G+G A G MD NML Sbjct: 239 LDMTSLVAGAKYRGDFEERLKKILEIIKDSKGRIILFIDEIHNIIGSGSASGTMDTANML 298 Query: 300 KPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYEL 359 KP LARG++ +GATT++EYR+YIE D AL+RRFQK+ + EPS+E TIAI+RG+K +YE Sbjct: 299 KPMLARGDILTIGATTIEEYRKYIEVDKALDRRFQKILIEEPSIETTIAIMRGIKSKYEN 358 Query: 360 HHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRI 419 HH ++ITDPA+ A LS R++ +R+LPD AID+IDEA + ++M D KPEELD L R+I Sbjct: 359 HHMIKITDPALTEAVKLSKRFLTERKLPDVAIDVIDEACAQVKMARDQKPEELDELHRKI 418 Query: 420 IQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAEL 479 IQL++E AL E D S R E++ + E++ + + + EK ++ E+ Sbjct: 419 IQLEMENIALKNEKDSLSNHRSKEKEEKIKELEKELEKKTDLYNKEKERQETIVKLEREI 478 Query: 480 EQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEV 539 + IE+A+ D + + K EK + Q E LR KV +E+ ++ Sbjct: 479 DIIGFEIEEAKDKRDFENLDKFVSLKDNVSEKLKKIENQGE---FYPLRTKVGVSEVKDI 535 Query: 540 LARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIG 599 +++ +G+P S++ + + + + ++L +G ++ +D + N + GL + ++P+ Sbjct: 536 ISKMSGMPKSKLQYDKLDSINIVREKLKEEFVGGDDMIDKIINTYIIAEGGLFERSKPVL 595 Query: 600 SFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEG 659 SF+ GP+ GK+ + K LA+++++ D++++ DMSEF +K S+++L+GAPPGYVGYE G Sbjct: 596 SFIVTGPSSSGKSYIAKLLADYLYEGDKSLLSFDMSEFTDKSSITKLIGAPPGYVGYEFG 655 Query: 660 GYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSN 719 G LT+A+R +PYSV++ + +E AH +V N++LQ++ DG + D +GR ++ +N++V++T Sbjct: 656 GVLTQALRTKPYSVLVFENIENAHFEVQNLVLQIVQDGTIKDNKGRDINLKNSIVVLTMT 715 Query: 720 LGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQL 779 + E +F +D V L + + + + Sbjct: 716 V------------------EDGDESAKEKLDVDFGKYVDYVFKLKRLDDDKLDKLISLNF 757 Query: 780 KRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELV 839 K L K L ER + + + D + AR LK+ I+Q + + ++ L+ E+ Sbjct: 758 KELEKALAERQINLSYAGGFFDKFGKYAKDEGFDARSLKKLIEQDVYFLICEKNLTSEIK 817 Query: 840 PGKVIRLEVNEDRIVAVQ 857 + L+ + + V+ Sbjct: 818 AFSELILDFDGENKFTVK 835 >UniRef50_C4V0P0 ATPase with chaperone activity, ATP-binding subunit n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V0P0_9FIRM Length = 833 Score = 650 bits (1677), Expect = 0.0, Method: Composition-based stats. Identities = 347/874 (39%), Positives = 488/874 (55%), Gaps = 89/874 (10%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 T A+ +Q +A +I L+ +L+ + + L G++ I Sbjct: 7 FTQAAIKAVEFSQYIAQRRGKGYIGTGQLLLGILHMRDTTAAEALDKCGVDYDSAEQVIR 66 Query: 66 QALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL-ESRGTLAD 124 + + V ++ RV+ A++ +F+++E +L+ L E GT Sbjct: 67 EG-DGFQDVLTPEETPYYTRRAQRVMQGAIDTAREE-RSFVTTEHILLSLLAEGEGTAIQ 124 Query: 125 ILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQ-----------ALKKYTIDLTERAE 173 L+ + + + +R+ +LKKY DLT A Sbjct: 125 TLEDLNVDIEALQNDVRAQMEDTEEAPKERSARRKTGKDSRKGLPASLKKYGTDLTAAAG 184 Query: 174 QGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLK 233 G+LDPVIGR EI R IQ+L RRTKNNP+L+GE GVGKTAI EGLA+RI GEVP L+ Sbjct: 185 GGELDPVIGRTAEIDRVIQILARRTKNNPLLLGEAGVGKTAIAEGLARRIAAGEVPFLLE 244 Query: 234 GRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAM 293 +R++ L M ALVAG KYRGEFEERLK V++D+ K + N+ILFIDE+HT++ AG A+GA+ Sbjct: 245 DKRIVTLSMTALVAGTKYRGEFEERLKNVVDDVVKAK-NIILFIDEIHTLIRAGGAEGAL 303 Query: 294 DAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGL 353 DA N+LKPALARG++ +GATTL EY++Y KD AL RRFQ V V EP D IL G Sbjct: 304 DAANILKPALARGQMQIIGATTLSEYKKYFAKDGALARRFQTVTVDEPGEADAEQILLG- 362 Query: 354 KERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELD 413 L RY E R++ + + Sbjct: 363 ----------------------LRGRY---------------EEFHHARIEDGAVTAAVR 385 Query: 414 RLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQ 473 R + L +A+ + AS+ R+ + Sbjct: 386 LSRRYLTDRFLPDKAIDLMDEAASRVRMKSV----------------------GGTDKLV 423 Query: 474 TIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTD 533 ++ E+ A D ++L+ + EL +LEA+ + E + +VT+ Sbjct: 424 GLRREIAGVVKDKNTAISRQDYETAAKLR-DREKELHAKLEASRRSEDTRTEI---RVTE 479 Query: 534 AEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLAD 593 +IA+V+A+WTGIPV R+ E ++LL +E + RVIGQ+EAV AV+ A+RR+RAG+ D Sbjct: 480 NDIADVVAQWTGIPVQRIAAKESDRLLALETHIGRRVIGQDEAVRAVARAVRRARAGVKD 539 Query: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGY 653 P RPIGSFLFLG TGVGKTEL +ALA +F ++EA++R DMSE+MEKH+ +RLVGAPPGY Sbjct: 540 PRRPIGSFLFLGATGVGKTELARALAEAVFGTEEAIIRFDMSEYMEKHTTARLVGAPPGY 599 Query: 654 VGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTV 713 VGYEEGG LT+AVRR+P+S+IL DEVEKAHPDVF++LLQVL+DGRLTDGQGR DFRNT+ Sbjct: 600 VGYEEGGQLTDAVRRKPFSIILFDEVEKAHPDVFHMLLQVLEDGRLTDGQGRVTDFRNTI 659 Query: 714 VIMTSNLGSDLIQERFGEL----------DYAHMKELVLGVVSHNFRPEFINRIDEVVVF 763 +IMTSN G+D ++ G + D K+ VL V FRPEF+NR+D+++VF Sbjct: 660 IIMTSNAGADHLRSTRGTIGFAVGLQARADEEQAKKRVLEEVRKIFRPEFLNRVDDMIVF 719 Query: 764 HPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQ 823 + LGE ++ I I L+ + RL E+ I +S A ++L G D +GARPL+RAIQ+ Sbjct: 720 NALGEPELSKIVDILLRDVKVRLAEQKINIEVSPSAKRVLIAKGADVKFGARPLRRAIQK 779 Query: 824 QIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857 IE+ LA+ IL+ + G I + D + V+ Sbjct: 780 NIEDALAEHILARDFASGDSISVRKLGDGLNFVK 813 >UniRef50_B5FD85 Type VI secretion ATPase, ClpV1 family n=2 Tax=Vibrio fischeri RepID=B5FD85_VIBFM Length = 860 Score = 649 bits (1675), Expect = 0.0, Method: Composition-based stats. Identities = 308/864 (35%), Positives = 479/864 (55%), Gaps = 31/864 (3%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 L + LAL A L + + + A LN + ++ L + Sbjct: 13 LDKESHLALEQAAQLCVTRGGNEVLCEDFILAALNNPQSFWNKACQQYNVSTDVLIEALQ 72 Query: 66 QALNRLPQVEGTGGDVQPSQDLVRVLNLCDK----LAQKRGDNFISSELFVLAALESRGT 121 S L+ L Q + L +L+ G Sbjct: 73 HG---RKSTSSESNHPVLSTALIEWLQESYLFSMLEMQLSEVLAANLLLTLLSHPNKYGH 129 Query: 122 LADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVI 181 + + A++ Q +E + + + Q + + + AL YT + T+ A+ K+DPV+ Sbjct: 130 TPYYRELSVIPVASLKQQVEGLVSCANRDSQSSAEHQNALDAYTTNYTQLAKDNKIDPVL 189 Query: 182 GRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALD 241 RD EIR+ I +L RR KNNP+++GE GVGKTA+VEGLA +I GEVP+ L+ +L+LD Sbjct: 190 CRDSEIRQMIDILARRRKNNPMIVGEAGVGKTALVEGLAIKIAQGEVPDILENVALLSLD 249 Query: 242 MGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKP 301 +G L AGA +GEFE RL V+ + + +ILFIDE HT++GAG G+ DA N+LKP Sbjct: 250 LGLLQAGASIKGEFERRLNLVITAVQESPTPIILFIDEAHTLIGAGGQAGSNDAANLLKP 309 Query: 302 ALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHH 361 ALARGEL +GATT EY++YIEKD AL RRFQ V V EP+V + ILRGL ERYE H Sbjct: 310 ALARGELRTIGATTWSEYKKYIEKDPALARRFQPVKVDEPNVTQAVTILRGLAERYEESH 369 Query: 362 HVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQ 421 V + D AI+AAA LS RYI+ RQLPDKAIDL+D A + +++ + +KPE L+ L I Sbjct: 370 GVYVRDDAIIAAAELSARYISGRQLPDKAIDLLDTACARVKINLKAKPESLETLLHIIAI 429 Query: 422 LKLEQQALMKESD---EASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAE 478 + E ++++ + + L E+LS +LE+EW+ +K T + + Sbjct: 430 TQRELDCVLRDQQAGINIEENTITQLKEKLSQTHLDAEQLEQEWQTQKELAEALLTSRID 489 Query: 479 LEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAE 538 + Q E+ R + + ++++ A T L+ + + +AE Sbjct: 490 IAQCNDEEEKHRLICN---------------QQEIHQALSDAQHTHSLVNYETCPSLVAE 534 Query: 539 VLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPI 598 V++ WTGIP+S + + ++L ++ +L ++ GQ++AV A+ AI+ + AGL +PN P Sbjct: 535 VVSHWTGIPMSTLQRGQATQVLTIKSKLKEQIKGQDQAVIALEKAIQATAAGLNNPNSPT 594 Query: 599 GSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEE 658 G FLF+GP+GVGKT+ +A+A+ M+ ++ + I+MSEF EKH+VSRL+G+PPGYVGY E Sbjct: 595 GVFLFVGPSGVGKTQTAQAIADLMYGGEQFLTTINMSEFQEKHTVSRLIGSPPGYVGYGE 654 Query: 659 GGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTS 718 GG LTEAVR+RPYSV+LLDEVEKA ++ N+ Q+ D G DG+GR ++F+ T++IMTS Sbjct: 655 GGVLTEAVRQRPYSVVLLDEVEKADREIMNLFYQIFDKGVANDGEGREINFKQTLIIMTS 714 Query: 719 NLGSDLIQERFGELD---YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIA 775 NL SD I+ + + + + + ++ F+P + R+ VV F PL + + ++ Sbjct: 715 NLASDQIEALCNQEEKPTTDALTKAIRPTLNQYFKPALVGRMT-VVPFFPLDMESMEALV 773 Query: 776 QIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQIL- 834 I+LK+L ++L + +H + ++ ++++ GAR + I Q++ + QIL Sbjct: 774 DIRLKQLTEQLSLQQITLHYDEAIIQHIAQSCTLTETGARNIDAIINGQLKPAFSSQILL 833 Query: 835 -SGELVPGKVIRLEVNEDRIVAVQ 857 P I L ++E+ V + Sbjct: 834 ALARKEPLTSISLCIDENGQVFCE 857 >UniRef50_B6EJ73 Chaperone ClpB n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6EJ73_ALISL Length = 872 Score = 649 bits (1674), Expect = 0.0, Method: Composition-based stats. Identities = 304/864 (35%), Positives = 483/864 (55%), Gaps = 31/864 (3%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 L + LAL A L + + + A LN + ++ L + Sbjct: 13 LDKESHLALEQAAQLCVTRGGHEVLCEDFILAALNNPQSFWNKACIQYEVSTENLIEALQ 72 Query: 66 QALNRLPQVEGTGGDVQPSQDLVRVLNLCD---KLAQKRGDNFISSELFVLAALESR-GT 121 R + + S L+ L L K + ++ L L A ++ G Sbjct: 73 H--GRQSR-SSESNNPVISTALIEWLQESYLYSMLEMKLSEILSANLLLTLLAHPNKYGH 129 Query: 122 LADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVI 181 + + ++ Q +E + + N + + AL YT + T+ A+ K+DPV+ Sbjct: 130 TPYYRELSVIPLTDLKQQVEGLINSVTENKTVNHEHQDALSAYTTNYTQLAKDNKIDPVL 189 Query: 182 GRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALD 241 RD EIR+ I +L RR KNNP+++GE GVGKTA+VEGLA +I GEVP+ L+ +L+LD Sbjct: 190 CRDSEIRQMIDILARRRKNNPMIVGEAGVGKTALVEGLAIKIAQGEVPDILENVSLLSLD 249 Query: 242 MGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKP 301 +G L AGA +GEFE RL V+ + + +ILFIDE HT++GAG G+ DA N+LKP Sbjct: 250 LGLLQAGASIKGEFERRLNLVIKAVQQSLTPIILFIDEAHTLIGAGGQAGSNDAANLLKP 309 Query: 302 ALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHH 361 ALARGEL +GATT EY++YIEKD AL RRFQ + V EP+V I ILRGL ++YE H Sbjct: 310 ALARGELRTIGATTWSEYKKYIEKDPALARRFQPIKVDEPTVSQAITILRGLADKYEESH 369 Query: 362 HVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQ 421 V + D AIVAAA LS RYI RQLPDKAIDL+D A + +++ + +KP+ L+ L I Sbjct: 370 GVYVRDDAIVAAAELSARYITGRQLPDKAIDLLDTACARVKINLKAKPQPLEALFHIIAI 429 Query: 422 LKLEQQALMKESD---EASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAE 478 + E ++++ +K + L +L + + + LE +W +K T + Sbjct: 430 TQRELNCVLRDKQAGIHIDEKHIYDLENKLQETQSKAQHLEHDWLNQKELAEALLTSRIN 489 Query: 479 LEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAE 538 + Q + E ++ ++K+ A L+ + + +AE Sbjct: 490 VAQCDDSQE---------------CEQLLSIQKETYHALMKAQSNQVLVSYETCPSLVAE 534 Query: 539 VLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPI 598 V++ WTGIP+S ++ + ++L + +L ++ GQ++A+ A+ AI+ + AGL +PN P Sbjct: 535 VISHWTGIPMSTLLRGQASQVLTLHTQLKQQIKGQDQAIIALQKAIQATAAGLNNPNAPT 594 Query: 599 GSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEE 658 G FLF+GP+GVGKT+ A+A+ M+ ++ + I+MSEF EKH+VSRL+G+PPGYVGY E Sbjct: 595 GVFLFVGPSGVGKTQTALAIADLMYGGEQFLTTINMSEFQEKHTVSRLIGSPPGYVGYGE 654 Query: 659 GGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTS 718 GG LTEAVR+RPYSVILLDEVEKA +V N+ QV D G + DG+GR ++F+ T++IMTS Sbjct: 655 GGVLTEAVRQRPYSVILLDEVEKADSEVMNLFYQVFDKGVVNDGEGREINFKQTLIIMTS 714 Query: 719 NLGSDLIQERFGELDY---AHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIA 775 NL S+ I+ + + + + + +++ F+P + R++ +V F+PL + + ++ Sbjct: 715 NLASEHIESLCNQDELPSVESLTKAIRPILNQYFKPALVARMN-IVPFYPLDLESMEALV 773 Query: 776 QIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQIL- 834 I++++L ++L+++ ++ + ++++ GAR + I Q++ + QIL Sbjct: 774 DIRMQQLSQQLQKQRIALYYDAHIISHIAKSCTLTETGARNIDAIINGQLKPAFSSQILL 833 Query: 835 -SGELVPGKVIRLEVNEDRIVAVQ 857 + P K I + ++ED V Q Sbjct: 834 ALAQKEPLKAISVNIDEDGQVYCQ 857 >UniRef50_C9SIE3 Heat shock protein n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SIE3_VERA1 Length = 744 Score = 647 bits (1668), Expect = 0.0, Method: Composition-based stats. Identities = 323/715 (45%), Positives = 452/715 (63%), Gaps = 65/715 (9%) Query: 147 ESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIG 206 ++ G E ++ AL+++ IDLT+RA+ GKLDPVIGRD EI+RTIQ+L RRTKNNPVLIG Sbjct: 66 HRMDMGGGEPEKPALEQFGIDLTQRAKDGKLDPVIGRDSEIQRTIQILSRRTKNNPVLIG 125 Query: 207 EPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDL 266 G GKTAI+EGLA RI+ G+VPE +K +R + ++R Sbjct: 126 NAGTGKTAILEGLALRIVRGDVPESVKNKR----------SSMRFR-------------- 161 Query: 267 AKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKD 326 + + + + ++DA N+LKPALARGEL C GATTLDEYRQ IEKD Sbjct: 162 -RPRAKSSSSSTSYTRSLVSARPKASIDASNLLKPALARGELQCCGATTLDEYRQ-IEKD 219 Query: 327 AALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQL 386 AL RRFQ + V EPSV+DTI+ILRG+K D+ L Sbjct: 220 VALARRFQPIMVNEPSVQDTISILRGIK----------------------------DKFL 251 Query: 387 PDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNE 446 PDKAIDL+DEAAS +++Q +SKPE++ LD++I+ +++E ++L KE D AS++R + L Sbjct: 252 PDKAIDLMDEAASHLKLQHESKPEDIMALDQKIMTIQIELESLRKEKDVASRERREKLET 311 Query: 447 ELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKI 506 +L + + L W+ E+A + + + EL++AK+ ++ A+R G+ R EL+Y I Sbjct: 312 DLKALQEEILGLTTRWEKERAEIEAVKNAQEELDKAKVELDVAQREGNFGRAGELRYSVI 371 Query: 507 PELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQEL 566 P LE+++ + + L+ + VT +IA V++R TGIPVS++ +KL+ ME L Sbjct: 372 PFLEEKIPKEEDKQDGS--LIHDSVTADDIAAVVSRITGIPVSKLTSGHIQKLVHMEDAL 429 Query: 567 HHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSD 626 V GQ+EA+ AVSNA+R RAGL+ NRP+ SF FLGPTGVGKTELCK LA F+F ++ Sbjct: 430 QASVRGQDEAIKAVSNAVRLQRAGLSGDNRPLASFFFLGPTGVGKTELCKKLAGFLFSTE 489 Query: 627 EAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDV 686 A+VR DMSEF EKH++SRL+GAP GYVGYE+ G LTEAVRR+PY+V+L DE EKAH D+ Sbjct: 490 SAVVRFDMSEFQEKHTISRLIGAPSGYVGYEDAGQLTEAVRRKPYAVLLFDEFEKAHRDI 549 Query: 687 FNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKE------- 739 +LLQVLD+G LTD QG VDFRNT+++ TSNLG+D++ Y ++ Sbjct: 550 SALLLQVLDEGYLTDAQGHKVDFRNTIIVFTSNLGADILVGANSSHPYTETEDGDVSPDV 609 Query: 740 --LVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISD 797 V+ VV+ + PEF+NRID +VF L + + I I+L+ L RL++R +++S Sbjct: 610 RKAVMDVVASAYPPEFLNRIDSFIVFKRLAKMALRDIVDIRLRELQARLDDRRITLNVSS 669 Query: 798 EALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDR 852 + L+E GYDP +GARPL R I +I N LA +I+ GEL G+ + + ED Sbjct: 670 DVRDWLAERGYDPRFGARPLNRLITNEIGNGLADRIIRGELKMGETAEVVIKEDG 724 >UniRef50_B9K2G7 ATP-dependent Clp protease ATP-binding subunit n=1 Tax=Agrobacterium vitis S4 RepID=B9K2G7_AGRVS Length = 903 Score = 645 bits (1664), Expect = 0.0, Method: Composition-based stats. Identities = 316/847 (37%), Positives = 481/847 (56%), Gaps = 23/847 (2%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 ++ L ++AL A S A G + ++ HL++A++ + S P+L G+ LR Sbjct: 10 IESLEPNLRVALETAASTAAGRGHGQVDIAHLLAAVM--DAASFQPVLEQLGLPIAALRR 67 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTL 122 +++ AL+ V G + SQ+++ + A + + + AA++ +L Sbjct: 68 EVSDALD--DTVVSGSGQLALSQNILTLGREAWICASLQSGRRAITLADIFAAMDDEPSL 125 Query: 123 ADILKAAGATTANITQAIEQMRGGESVNDQGAED--------QRQALKKYTIDLTERAEQ 174 + + + + + + V + + + + L+ YT DLTE A Sbjct: 126 RALTRGRFPSLRMLDRTALETLLQTDVVAETPKSSLSPASVREDEFLRLYTHDLTEDARA 185 Query: 175 GKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKG 234 G+LDPV+GRD E+R+ I +L RR +NNP+L+GE GVGKTA+ E LA I G VPE L+ Sbjct: 186 GRLDPVVGRDGELRQMIDILLRRRQNNPILVGEAGVGKTAVAEALALEIAAGRVPEKLQS 245 Query: 235 RRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMD 294 R+L LD+ L AGA +GEFE RL GV+ + + +ILFIDE H ++GAG A G D Sbjct: 246 VRLLMLDLTLLQAGAGVKGEFERRLTGVIEAVKRSPEPIILFIDEAHGLIGAGGASGQGD 305 Query: 295 AGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLK 354 A N+LKPALARGE+ + ATT EY++Y EKDAAL RRFQ V V EP E I +LRG+ Sbjct: 306 AANILKPALARGEVRTIAATTWSEYKKYFEKDAALTRRFQPVHVREPDEETAIRMLRGIA 365 Query: 355 ERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDR 414 E + HH V+I D AIVAA LS R++ RQLPDKA+ LID AA+++ + + PE+L Sbjct: 366 ETFMAHHGVKIRDEAIVAAVQLSARFLPARQLPDKAVSLIDTAAATVSLARQTVPEQLLL 425 Query: 415 LDRRIIQLKLEQQALMKESDEAS-KKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQ 473 L + L +E L +E + ++R + E+ ++ L+ + AE A+L+ + Sbjct: 426 LKSELAHLTVETDWLAREPENTDVQERRQAVTTEMERLAKEIDSLQARYDAEIAALAASD 485 Query: 474 TIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTD 533 A ++ K+A + A V ++ L+ + L + E K L+ ++V Sbjct: 486 EAPA-VDSDKMASKDAPDVNVTPLITPLRTRGLVRRAASLAPTSAGEEK---LVPHEVDR 541 Query: 534 AEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLAD 593 +A VLARWTGIP+ +++ + E ++ L +VIGQ+ A++ + +A+R +RAGL+D Sbjct: 542 NVVAAVLARWTGIPLGKLLADQIESAKSLDMRLKEKVIGQDAALERIGDAMRAARAGLSD 601 Query: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGY 653 P RP F+ +G +G GKTE LA+ M+ + + I+MSEF E+H VS L+GAPPGY Sbjct: 602 PRRPPAVFMLVGMSGTGKTETALTLADLMYGGSQHLTTINMSEFKEEHKVSMLLGAPPGY 661 Query: 654 VGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTV 713 VGY EGG LTEAVRRRPY V+LLDE++KAHP V +I QV D G L DG+GR VDFRNT Sbjct: 662 VGYGEGGVLTEAVRRRPYGVLLLDEIDKAHPGVQDIFYQVFDKGMLRDGEGRDVDFRNTT 721 Query: 714 VIMTSNLGSDLIQERFGELDY----AHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQ 769 + MT+N GS+L+ + D ++ L++ + F+P F+ R ++ F PLG++ Sbjct: 722 IFMTANTGSELLASLALDPDTMPEGEALEALLMPELQKQFKPAFLGR-TLLLPFMPLGKE 780 Query: 770 HIASIAQIQLKRLYKR-LEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENP 828 ++ I IQ+ R+ +R G E+ +S+EA L GAR ++ I + + P Sbjct: 781 ALSRIVDIQINRIRERIFSAYGTELALSEEARNALVGRAVASEIGARAIEIMIGRDLLPP 840 Query: 829 LAQQILS 835 L+ L Sbjct: 841 LSSFFLE 847 >UniRef50_Q7CUP5 ATP-dependent Clp protease, ATP-binding subunit n=5 Tax=Alphaproteobacteria RepID=Q7CUP5_AGRT5 Length = 892 Score = 644 bits (1661), Expect = 0.0, Method: Composition-based stats. Identities = 308/873 (35%), Positives = 473/873 (54%), Gaps = 54/873 (6%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 L ++ L A S+A+ +++++ H + A++ + G + I L+ +I Sbjct: 13 LEPDLRVTLEAAASVAVRMGHRYVDIPHWLLAVV--DAGIYAETFDELKIPLPVLKAEIG 70 Query: 66 QALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQ-KRGDNFISSELFVLAALESRGTLAD 124 ++L + G G + SQ+++ LA + G + ++ +LA E + Sbjct: 71 RSLEE--AIIGDGEALSLSQNILTAAREAWILASLEAGRDRVTLCDLLLAMDEETSLRSF 128 Query: 125 ILKAAGATTANITQAIEQMRGGES----------------VNDQGAEDQRQALKKYTIDL 168 + A + A A+E++R A Q L+ YT D+ Sbjct: 129 VRSAFPSLKAMDRGALERLRSSAENGAGVDVPSALTSSGEAGSAQAAGQNDFLRLYTHDM 188 Query: 169 TERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEV 228 T A GK+DPVIGRD+E+R+ + +L RR +NNP+L+GE GVGKTA+ E LA I +G V Sbjct: 189 TTDARNGKVDPVIGRDDELRQLVDILTRRRQNNPILVGEAGVGKTAVAEALALEIASGNV 248 Query: 229 PEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGK 288 PE L+ +L LD+ L AGA +GEFE RL GV++ + + VILFIDE H +VGAG Sbjct: 249 PEKLRNVCLLNLDISLLQAGAGVKGEFERRLHGVIDAVKRSAEPVILFIDEAHGLVGAGG 308 Query: 289 ADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIA 348 A G DA N+LKPALARGE+ V ATT EY++Y EKDAAL RRFQ V V EP I Sbjct: 309 AAGQGDAANILKPALARGEVRTVAATTWSEYKKYFEKDAALTRRFQPVHVREPDEATAIR 368 Query: 349 ILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSK 408 +LRG+ + + HH+V + D AIVAA LS RY+ RQLPDKA+ L+D AA+++ + + Sbjct: 369 MLRGVADTFVSHHNVTVRDEAIVAAVQLSARYMPARQLPDKAVSLLDTAAAAVSLARQTL 428 Query: 409 PEELDRLDRRIIQLKLEQQALMKE-SDEASKKRLDMLNEELSDKERQYSELEEEWKAEKA 467 PE L ++ L E L++E DE + R+ + +EL E +L + AE A Sbjct: 429 PERLRAMESERHLLSDELNWLLREPQDEDMQNRIQSIRDELERLEAGIDDLRGRYDAEMA 488 Query: 468 SLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLL 527 L+ E+ + +S L+ A RL+ Sbjct: 489 ELAAL-------------SEEQPAETGASNVSHLR-----------PATEMRPANAERLV 524 Query: 528 RNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRS 587 V IA V++RWTGIP+ +++ + E ++ + RV+GQ+ A+ +++A+R + Sbjct: 525 PTVVDREAIAAVVSRWTGIPLGKLLADQIESARTLDVRMRQRVVGQDAAITRIADAMRTA 584 Query: 588 RAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLV 647 RAGL+DP RP F +G +G GKTE +LA+ ++ + + I+MSEF E+H VS L+ Sbjct: 585 RAGLSDPRRPPAVFFLVGMSGTGKTETALSLADLLYGGNSHLTTINMSEFKEEHKVSLLL 644 Query: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTV 707 G+PPGYVG+ EGG LTEAVRRRP+ V+LLDE++KAHP V +I QV D G L DG+GR V Sbjct: 645 GSPPGYVGFGEGGVLTEAVRRRPFGVLLLDEIDKAHPGVQDIFYQVFDKGVLRDGEGRDV 704 Query: 708 DFRNTVVIMTSNLGSDLIQERFGELDY----AHMKELVLGVVSHNFRPEFINRIDEVVVF 763 DF+NT + MT+N GS+L+ + D ++ L++ ++ F+P F+ R ++ F Sbjct: 705 DFKNTTIFMTANTGSELLSALSADPDTMPEGEALEALLMPELTKQFKPAFLGR-TIILPF 763 Query: 764 HPLGEQHIASIAQIQLKRLYKRL-EERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQ 822 PLG + +AS+ +Q+ ++ R+ G ++ +SD A L GAR ++ I Sbjct: 764 MPLGAEELASVVDMQIGKIRDRVLATYGTDLRLSDAARDALVARAGASEIGARAIEIMIG 823 Query: 823 QQIENPLAQQILSGELVPGKV--IRLEVNEDRI 853 + + PL+ L + +V I ++ E+ Sbjct: 824 KDLLPPLSSFFLEKVIAGERVGKIVVDFGENGF 856 >UniRef50_B5FRR8 Chaperone protein clpB n=19 Tax=Gammaproteobacteria RepID=B5FRR8_SALDC Length = 911 Score = 640 bits (1652), Expect = 0.0, Method: Composition-based stats. Identities = 307/851 (36%), Positives = 444/851 (52%), Gaps = 35/851 (4%) Query: 5 RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDI 64 RL + AL A S + I H++ +L + A I A LR + Sbjct: 12 RLAPFAKQALEAAASECMSQQAAEITVAHVLLQMLATPRSDFRVIAERAEIGADDLRQAL 71 Query: 65 NQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKR--------GDNFISSELFVL--- 113 + + S LV L LA G ++ L Sbjct: 72 T--VENYATARSSDSYPSFSPMLVEWLKEAWLLASAEMQQTELRGGVLLLALLHSPLRYL 129 Query: 114 ---AALESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTE 170 AA D+L+ A + + A+ L +Y ++T+ Sbjct: 130 PPAAARLLTAINRDLLRQDFAGWTKESAESVILNADGQTASAIADTGDTLLARYAKNMTD 189 Query: 171 RAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPE 230 A QG+LDPV+ RD EI I +L RR KNNPV++GE GVGK+A++EGLA RII G+VP+ Sbjct: 190 DARQGRLDPVLCRDNEIDLMIDILCRRRKNNPVVVGEAGVGKSALIEGLALRIIAGQVPD 249 Query: 231 GLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKAD 290 L+ ++ LD+GAL AGA +GEFE+R KG++ ++ + VILFIDE HT++GAG Sbjct: 250 KLRDTDIMTLDLGALQAGASVKGEFEKRFKGLMAEVIQSPKPVILFIDEAHTLIGAGNQQ 309 Query: 291 GAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAIL 350 G +D N+LKPALARGEL + ATT EY++Y EKD+AL RRFQ V V+EP+ + IL Sbjct: 310 GGLDISNLLKPALARGELKTIAATTWSEYKKYFEKDSALSRRFQLVKVSEPNAAEATIIL 369 Query: 351 RGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPE 410 RGL YE H V I D A+ AAATLS RY++ RQLPDKAID++D A + + + + S P Sbjct: 370 RGLSAVYEQSHGVLIDDEALQAAATLSERYLSGRQLPDKAIDVLDTACARVAINLSSPPR 429 Query: 411 ELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKER---QYSELEEEWKAEKA 467 ++ L Q + E + L +E + LNE L+ + + LE W+ ++ Sbjct: 430 QISALTTLRQQCEAEIRQLEREIRIGLRSDTSRLNEVLAQYDETLSELDALEAAWRQQQT 489 Query: 468 SLSGTQTIKAELEQAKIAI---EQARRVGDLARMSELQYGKIPELEKQLEAATQLEG--- 521 + ++ L A E A + + PE E ++ A +L Sbjct: 490 LVQEIIALRKGLLDETDATGNDETATPETEAVGSDDESVTAPPEAEPEISPAARLAQLTA 549 Query: 522 ------KTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNE 575 T L+ V +IA V+ WTG+P++R+ ++E + + Q L + GQ Sbjct: 550 ELDALHHTQLLVSPHVDKKQIASVITEWTGVPLNRLSQNEMSVITDLPQWLGDTIKGQAL 609 Query: 576 AVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMS 635 A+ + + +RA L P RP+G+FL GP+GVGKTE LA ++ + + I+MS Sbjct: 610 AIKHLHKHLLTARADLRRPGRPLGAFLLAGPSGVGKTETVLQLAELLYGGRQYLTTINMS 669 Query: 636 EFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLD 695 EF EKH+VSRL+G+PPGYVGY EGG LTEA+R++PYSV+LLDEVEKAHPDV N+ Q D Sbjct: 670 EFQEKHTVSRLIGSPPGYVGYGEGGVLTEAIRQKPYSVVLLDEVEKAHPDVLNLFYQAFD 729 Query: 696 DGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFIN 755 G + DG+GR +D +N V +TSNLG +I E + M+E + V++ F+P + Sbjct: 730 KGEMADGEGRLIDCKNVVFFLTSNLGYQVIVEHAD--NPEAMQEALYPVLADFFKPALLA 787 Query: 756 RIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEER-GYEIHISDEALKLLSENGYDPVYGA 814 R+ EVV + PL + +A I +L RL L R G E+ I E + + GA Sbjct: 788 RM-EVVPYLPLSRETLAVIIAGKLARLDNVLRARFGAEVVIEPEVTDEIMQRVTRAENGA 846 Query: 815 RPLKRAIQQQI 825 R L+ I ++ Sbjct: 847 RMLESVIDGEM 857 >UniRef50_B8NZA1 Predicted protein (Fragment) n=1 Tax=Postia placenta Mad-698-R RepID=B8NZA1_POSPM Length = 682 Score = 639 bits (1649), Expect = 0.0, Method: Composition-based stats. Identities = 308/685 (44%), Positives = 432/685 (63%), Gaps = 14/685 (2%) Query: 163 KYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQR 222 +Y D+T A +GKL+ IGRDEEIRR IQ+L RRTKN+ VLIGEPGVGKTA+ EGLA R Sbjct: 4 RYATDMTALAREGKLNDTIGRDEEIRRVIQILCRRTKNSAVLIGEPGVGKTAVAEGLAHR 63 Query: 223 IINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEE-----RLKGVLNDLAKQEGNVILFI 277 I + +VPE LKG + +LD+GAL AGA +GE+E R + + VILFI Sbjct: 64 INSRDVPEHLKG-TIYSLDLGALFAGAG-KGEYEAASLFPRSLRLYWLTQQNANPVILFI 121 Query: 278 DELHTMV---GAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334 DELH + + MDA N+LKPALARG+ C+GATTL EYR++IEKD ALERRF Sbjct: 122 DELHLITVGKSSSGQSSGMDAANLLKPALARGQFRCIGATTLAEYREHIEKDGALERRFA 181 Query: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394 V V EP++E+ ILRG +ERYE HH V I D AIV A L+HRY+ R+LPD A DL+ Sbjct: 182 TVLVNEPTIEEATTILRGTRERYESHHRVWIMDQAIVTAVKLAHRYLTARRLPDSAFDLM 241 Query: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQ 454 DEA +S R+ D KPE +D +++ ++Q++ +A+ +++ A + L+ S E + Sbjct: 242 DEACASARVSQDMKPEAIDTVEQELLQIEGRIKAIERDNHPADDRALEEAKSVRSSLETR 301 Query: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLE 514 LEE+ + + ++ ++ K ++ +++ + +E + K+ + K L Sbjct: 302 KKRLEEQQQKVREWWGDISALRGLIKAKKDDLDIVKKLTE----TENRGPKVADNMKALN 357 Query: 515 AATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574 A R + +T IAEV+ R T IPV R++ S++ +LL +E L +V+GQ Sbjct: 358 AYEHRRYIVSRSSPDIITPESIAEVVERATKIPVQRLLASDKTRLLGLEDALAQQVVGQP 417 Query: 575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 634 EAV +V+NAI+ SR GL + NRPI S LF GP+G GKT L KALA +F +MVRID Sbjct: 418 EAVKSVTNAIQLSRTGLNNTNRPIASLLFTGPSGTGKTLLSKALAQELFGQTTSMVRIDG 477 Query: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694 SE+ + HS+SRL+G+PPGYVGY++GG LTE VRR PY ++LLDE+EK + + LQVL Sbjct: 478 SEYSQSHSISRLIGSPPGYVGYDQGGQLTEYVRRTPYCIVLLDEIEKTCLEFLTLFLQVL 537 Query: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFI 754 D+GRLTDG GR VDFRN V+IMTSN+G+DL+ G + A +++ F EF+ Sbjct: 538 DEGRLTDGHGRLVDFRNCVIIMTSNVGADLLSAENGPIQEAVRLKVMDRFKDVRFPVEFL 597 Query: 755 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 814 NRID+VV+F + + + SI + L+ L +R + + I +A L G P YGA Sbjct: 598 NRIDDVVMFRTMSQAVMKSILKKNLQDLKQREGMKRLHLDIDAQAETWLISVGISPQYGA 657 Query: 815 RPLKRAIQQQIENPLAQQILSGELV 839 RPL R IQ+++ NPL+Q++L G + Sbjct: 658 RPLARVIQRELLNPLSQRLLEGTVK 682 >UniRef50_Q6TKU1 Aec27 n=39 Tax=cellular organisms RepID=Q6TKU1_ECOLX Length = 919 Score = 638 bits (1646), Expect = 0.0, Method: Composition-based stats. Identities = 307/858 (35%), Positives = 446/858 (51%), Gaps = 46/858 (5%) Query: 5 RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDI 64 RL + AL A S + I H++ +L V + GI+A LR + Sbjct: 12 RLNPFAKQALEMAASECMSQQASEITVAHVLLQMLAIPRNDVRVIAERTGISAEDLRQAL 71 Query: 65 NQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQ-KRGDNFISSELFVLAALESR---- 119 + P G S L+ L LA + + + S + +L L S Sbjct: 72 T--VESYPGGRSAEGYPSFSPMLIEWLKESWLLASAQMQHSELRSGVLLLTLLHSPLRYI 129 Query: 120 -GTLADILKAAGATTAN------ITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERA 172 A +L A ++ E + + E L +Y ++T A Sbjct: 130 PPAAARLLTAINRDQLQQDFAAWTKESAESVDLAGGQTPRATETGDTLLARYAKNMTADA 189 Query: 173 EQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGL 232 G+LDPV+ R+ EI I +L RR KNNPV++GE GVGK+A++EGLA RI+ G+VP+ L Sbjct: 190 RNGRLDPVLCRNYEIDLMIDILCRRRKNNPVVVGEAGVGKSALIEGLALRIVAGQVPDKL 249 Query: 233 KGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGA 292 K ++ LD+GAL AGA +GEFE+R KG++ ++ VILFIDE HT++GAG G Sbjct: 250 KNTDIMTLDLGALQAGASVKGEFEKRFKGLMAEVIFSPVPVILFIDEAHTLIGAGNQQGG 309 Query: 293 MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRG 352 +D N+LKPALARGEL + ATT EY++Y EKDAAL RRFQ V V+EP+ + ILRG Sbjct: 310 LDISNLLKPALARGELKTIAATTWSEYKKYFEKDAALSRRFQLVKVSEPNAAEATIILRG 369 Query: 353 LKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEEL 412 L YE H V I D A+ AAATLS RY++ RQLPDKAID++D A + + + + S P+++ Sbjct: 370 LSAVYEQSHGVLIDDDALQAAATLSERYLSGRQLPDKAIDVLDTACARVAINLSSPPKQI 429 Query: 413 DRLDRRIIQLKLEQQALMKESD---EASKKRLDMLNEELSDKERQYSELEEEWKAEKASL 469 L Q + E + L +E R+ + E+ + ELE W+ + + Sbjct: 430 SALTTLSHQQEAEIRQLERELRIGLRTDTSRMTEVLEQYDETLSALDELEVAWQQQ-TLV 488 Query: 470 SGTQTIKAEL------------------------EQAKIAIEQARRVGDLARMSELQYGK 505 ++ +L EQ E A G + + Sbjct: 489 QEIIALRQQLLGVAEDDVASLPDADAVEDTPPEAEQDSTDAESADDAGSVQPEETAETVS 548 Query: 506 IPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQE 565 + QL A L+ V +IA V+A WTG+P++R+ ++E + + Sbjct: 549 PVQRLAQLTAELDALHNDQLLVSPHVDKKQIAAVIAEWTGVPLNRLSQNEMSVITDLPVW 608 Query: 566 LHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDS 625 L + GQ+ A+ ++ + +RA L P RP+G+FL GP+GVGKTE LA ++ Sbjct: 609 LGGTIKGQDLAIASLHKHLLTARADLRRPGRPLGAFLLAGPSGVGKTETVLQLAELLYGG 668 Query: 626 DEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPD 685 + + I+MSEF EKH+VSRL+G+PPGYVGY EGG LTEA+R++PYSV+LLDEVEKAHPD Sbjct: 669 RQYLTTINMSEFQEKHTVSRLIGSPPGYVGYGEGGVLTEAIRQKPYSVVLLDEVEKAHPD 728 Query: 686 VFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVV 745 V N+ Q D G + DG+GR +D +N V +TSNLG +I E D M+E + V+ Sbjct: 729 VLNLFYQAFDKGEMADGEGRLIDCKNIVFFLTSNLGYQVIVEHAD--DPETMQEALYPVL 786 Query: 746 SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEER-GYEIHISDEALKLLS 804 + F+P + R+ EVV + PL ++ +A+I +L RL L R G ++ I E + Sbjct: 787 ADFFKPALLARM-EVVPYLPLSKETLATIIAGKLARLDNVLRSRFGADVIIGPEVTDEIM 845 Query: 805 ENGYDPVYGARPLKRAIQ 822 GAR L+ I Sbjct: 846 SRVTRAENGARMLESVID 863 >UniRef50_Q3JGS2 ATP-dependent Clp protease ATP-binding subunit n=35 Tax=pseudomallei group RepID=Q3JGS2_BURP1 Length = 956 Score = 632 bits (1630), Expect = e-179, Method: Composition-based stats. Identities = 301/883 (34%), Positives = 458/883 (51%), Gaps = 59/883 (6%) Query: 1 MRLDRLTN----KFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGIN 56 M +R+ N AL DA +L + FI+ H LL +E ++ L G + Sbjct: 1 MNRERIFNCLGRTTYAALVDATALGRSRRHAFIDLDHWALCLLQREQSDLARLFELFGSD 60 Query: 57 AGQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDN-FISSELFVLAA 115 AG+ + + +AL+ + D+ S L R + +Q + S +LA Sbjct: 61 AGEAKRRMEKALDGFDVSGDSLRDI--SSSLERSVGPAVIWSQIAARAGKVRSGHLLLAW 118 Query: 116 LESRGT----------------LADILKAAGATTANITQAIEQMRGGE------SVNDQG 153 L+ T L D++K A A +A E + + G Sbjct: 119 LDEDLTRRWLQQRVPSGITSVALDDVVKRYEALAAGWPEADEAPAALDGAALGAQAGEAG 178 Query: 154 AEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKT 213 A+ AL K+ +TE+A +G+LDPV+GRD+E+R I +L RR +NNP+L+GE GVGKT Sbjct: 179 ADGTGDALAKWATCVTEQAARGELDPVVGRDDELRTVIDILSRRRQNNPILVGEAGVGKT 238 Query: 214 AIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNV 273 A+VE LAQ+I G VP GL G +V ALD+ + AGA RGEFE+RLK +++ + + Sbjct: 239 AVVEALAQKIHAGAVPPGLVGAQVWALDLARMQAGAGVRGEFEQRLKSLIDAVIASPAPI 298 Query: 274 ILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRF 333 ILF DE HT++GAG A G DA N++KP LARG+L V ATT EY+QYIE DAAL RRF Sbjct: 299 ILFCDETHTLIGAGGAAGTGDAANLIKPMLARGQLRMVAATTWSEYKQYIEPDAALVRRF 358 Query: 334 QKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDL 393 Q V V EPS + + +LR + R+ HH V+I D A+ A LS RY+ RQLPDKAI L Sbjct: 359 QAVAVDEPSDDAAVDMLRTIAPRFAAHHGVRIVDSALRGAVELSRRYLPARQLPDKAISL 418 Query: 394 IDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKER 453 +D A + + M P EL+RL + + + SD R EL ++ Sbjct: 419 LDTACARVAMSQSCAPAELERLQHQAFAIGQTLD--WRASDRRMGVRTPGDEAELEGRQA 476 Query: 454 QYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQL 513 ++ + + ++A L + A QA A + + Sbjct: 477 SLAQQAATLETVVDAQRD--EVRAWLARLNDATPQAADGDGAAFAARI------------ 522 Query: 514 EAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQ 573 R +R V + ++EVLA WTG+PV+++ + + ++++ +E L+ + GQ Sbjct: 523 --------GANRWVRPWVDEHVVSEVLAEWTGVPVAQLAQDDAQRVVELEAALNAGIHGQ 574 Query: 574 NEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRID 633 A+ +++ A++ S +GL DP RP+G L GPTG GK++ LA +F + +++ + Sbjct: 575 TGAMRSIAQALQVSHSGLNDPRRPLGVMLLAGPTGTGKSQAAAKLAELLFGGERNLLQFN 634 Query: 634 MSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQV 693 M+EF E H+VS L GAPPGYVGY +GG LTEAVR++PYSV+LLDE ++AHPD+ + QV Sbjct: 635 MNEFQEAHTVSTLKGAPPGYVGYGKGGRLTEAVRKKPYSVLLLDEFDRAHPDIHEVFYQV 694 Query: 694 LDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFG---ELDYAHMKELVLGVVSHNFR 750 D G + DG+GR + FRN ++++TSNLG I+ + A + +LV + F Sbjct: 695 FDQGWMEDGEGRRISFRNCLILLTSNLGEAEIEAACKADPRISQAKLDKLVGERLQGRFS 754 Query: 751 PEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDP 810 P + RI ++V F L + IA L L +RL + + + ++ Sbjct: 755 PALLARI-QLVAFRTLDVDALTGIATQALDELGERLAQNDLQWRADEGVASWIAHAVSQH 813 Query: 811 VYGARPLKRAIQQQIENPLAQQILS--GELVPGKVIRLEVNED 851 R ++ ++Q + +A+ +L+ E K +RL NE Sbjct: 814 PANGRAVRDLLRQHVMPAVARGVLAARAEGRALKTVRLAANEK 856 >UniRef50_UPI0001C37703 ATPase AAA-2 domain protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37703 Length = 792 Score = 631 bits (1628), Expect = e-179, Method: Composition-based stats. Identities = 303/728 (41%), Positives = 449/728 (61%), Gaps = 71/728 (9%) Query: 130 GATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRR 189 G + + + + S + + + + + L Y +L+++A G+LD +IGRD+EI R Sbjct: 122 GGSESGNSSPSGKSDKKGSSSRREKKKELKFLGSYCTNLSQKAADGQLDNIIGRDKEIAR 181 Query: 190 TIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGA 249 IQ+L RRTKNNP LIGEPGVGKTAI EG+AQRI +G+VP L +++ LD+ ALVAG Sbjct: 182 VIQILSRRTKNNPCLIGEPGVGKTAIAEGIAQRINSGDVPFNLADKKLYLLDLTALVAGT 241 Query: 250 KYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELH 309 ++RG+FE R+KG+++++ K+EGN+ILFIDE+H +VGAG ++G+M+A N+LKPAL+RGE+ Sbjct: 242 QFRGQFESRVKGLVDEV-KREGNIILFIDEVHNLVGAGDSEGSMNAANILKPALSRGEVQ 300 Query: 310 CVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPA 369 +GATT EYR+YIEKD+ALERRFQ V V EP++EDT+++L G+K+ YE +HH+ I+D Sbjct: 301 VIGATTFGEYRKYIEKDSALERRFQPVTVNEPNIEDTVSVLLGIKKYYEEYHHLHISDYL 360 Query: 370 IVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQAL 429 + A LS RYI DR LPDKAIDL+DEA + ++ + E +++ + I L Sbjct: 361 VRVCAVLSERYITDRFLPDKAIDLMDEACAYTCIR-SPEIAEYEKIKKEISVL------- 412 Query: 430 MKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQA 489 E E S D ++ + +K +L A+ + Sbjct: 413 --EGMEKSISEQDEIDYQ-----------------------ALAEVKGKLIHAREDEAKL 447 Query: 490 RRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVS 549 R + ++E K+ EL + A+ E + +++ Sbjct: 448 RDKAESVEVTEGDIAKVVELWTGIPASKIAENEFLKI----------------------- 484 Query: 550 RMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGV 609 ++E L RV+GQ+EAV+ ++ AI+R+R L+ RP SF+F+GPTGV Sbjct: 485 ----------AKLEGALKSRVLGQDEAVEVLTKAIKRTRVQLSKRRRP-ASFIFVGPTGV 533 Query: 610 GKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRR 669 GKTEL KALA MFDS E ++R+DM+E+MEKHSV+R++G+PPGYVGY+E G LTE VRRR Sbjct: 534 GKTELVKALAEEMFDSPEPLIRLDMTEYMEKHSVARMIGSPPGYVGYDEAGQLTEKVRRR 593 Query: 670 PYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERF 729 PYSVIL DE+EKAHPDV NIL+Q+LD+G++ D GRTV+F NT++ MTSN GS Sbjct: 594 PYSVILFDEIEKAHPDVMNILMQILDEGKVDDAHGRTVNFENTIICMTSNAGSTDKSVGV 653 Query: 730 GELDYAH--MKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLE 787 G A K+ + + RPEFI+RIDE+VVF L +++ A IA + L + + L Sbjct: 654 GFNRTADEVSKDKAMKGLREFLRPEFISRIDEIVVFRQLTKENFADIAALMLDEMKEPLA 713 Query: 788 ERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLE 847 E+ + + EALKL++E + YGAR ++R I+Q++E+ +A+ I+ + I + Sbjct: 714 EKNIGLTYTPEALKLIAEKSFGKPYGARDIRRVIRQEVEDKVAEIIIEN-ASDTETIAVS 772 Query: 848 VNEDRIVA 855 N +++V Sbjct: 773 ANGEQLVV 780 >UniRef50_D1PA52 Negative regulator of genetic competence n=1 Tax=Prevotella copri DSM 18205 RepID=D1PA52_9BACT Length = 892 Score = 631 bits (1627), Expect = e-179, Method: Composition-based stats. Identities = 312/865 (36%), Positives = 461/865 (53%), Gaps = 84/865 (9%) Query: 6 LTNKFQLALADAQSLALGHDNQ-FIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDI 64 + + D+ A +++ +EP HL+ A+L + V+ L+ G++ + + Sbjct: 86 FSQITDSIIRDSIREANNYEHSKIVEPRHLLLAILRNDKNPVANWLSQLGLSYDRAIEML 145 Query: 65 NQALNRLPQVEGTGGDVQPSQDLV-RVLNLCDKLAQKRGDNFISSELFVLAALESRGTLA 123 Q D + + D+ + + A + Sbjct: 146 YPTDKDEEQKTEEPKDFKMEPQTPDSEIPDADRQEEAENLEMAGG----IEAEDDYNEQN 201 Query: 124 DILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGR 183 D+++ + + K++ DLT+ A +GKLDPV+GR Sbjct: 202 DMMETDEEPFDMEKDQNPMRLSTRPNGTPRKKSSTPTIDKFSFDLTKAAAEGKLDPVVGR 261 Query: 184 DEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMG 243 ++EI+R +++L RR KNNPVLIGEPGVGK+AIVEGLAQ I N E +R+++LD+ Sbjct: 262 EKEIQRVLEILGRRKKNNPVLIGEPGVGKSAIVEGLAQLINNQETSPMFFNKRLVSLDLT 321 Query: 244 ALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPAL 303 A+VAG K+RG+FEER+K V+ +L +I+FIDE+HTM+GAG +G+MDA N+LKPAL Sbjct: 322 AIVAGTKFRGQFEERIKNVIKELENHP-EIIIFIDEIHTMIGAGSGEGSMDAANILKPAL 380 Query: 304 ARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHV 363 ARG + C+GATTLDEYR+ IEKD ALERRFQKV V + E+T+ IL +K+ YE HH V Sbjct: 381 ARGIIQCIGATTLDEYRKSIEKDGALERRFQKVLVEPTTREETLLILHNIKQHYEKHHCV 440 Query: 364 QITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLK 423 RY D E +L R I + Sbjct: 441 ---------------RY------------------------TDEALEACVKLTERYITDR 461 Query: 424 LEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAK 483 + DEA + + ++ EL++ Sbjct: 462 HFPDKAIDVIDEA---------------------GSRVHINNASVPAPYIKLEKELKKII 500 Query: 484 IAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARW 543 +QA + + + + ++EK++E + +VT +IA V++ Sbjct: 501 SKKQQAVANQNFEMAASCRDAQ-TKIEKEIEDMKAQWQQGEIGEYVEVTAEDIANVISMM 559 Query: 544 TGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLF 603 TG+P RM E E ++L +E L H+VI Q+ A++ + I R+R GL DPN PIG F+F Sbjct: 560 TGVPAQRMAEGESKRLKDLEHNLKHKVIAQDNAINKMVKTILRNRVGLRDPNHPIGVFMF 619 Query: 604 LGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLT 663 LGPTGVGKT L + LA MF S ++++RIDMSEF E + SRLVGAPPGYVGY EGG LT Sbjct: 620 LGPTGVGKTYLAQKLAEEMFGSKDSLIRIDMSEFSESFNTSRLVGAPPGYVGYNEGGQLT 679 Query: 664 EAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSD 723 E VRR+PYS++LLDE+EKA+ VFN+LLQVLD+GRLTDG GR +DFRNT++IMTSN G+ Sbjct: 680 EKVRRKPYSIVLLDEIEKANSKVFNLLLQVLDEGRLTDGNGRLIDFRNTIIIMTSNAGTR 739 Query: 724 LIQE----------------RFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLG 767 +++ E D + + +V +S F PEF+NR+D+++ F L Sbjct: 740 QLKDFGRGVGFTSAGIKGGLAMDEKDKEYARSIVQKSLSKQFAPEFLNRLDDIITFDQLD 799 Query: 768 EQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIEN 827 I I + L+ L KR+EE G+ I+++A +++++ GYD +GARPL+RAIQ IE+ Sbjct: 800 LNAIKRIIDLDLEGLVKRIEELGFHFQITEKAKEMVAKKGYDVQFGARPLRRAIQTYIED 859 Query: 828 PLAQQILSGELVPGKVIRLEVNEDR 852 + + +L G + PG I + N + Sbjct: 860 SVCEMLLDGTMKPGDTISVGKNSKK 884 Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 55/162 (33%), Gaps = 8/162 (4%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 ++ ++ Q L + A + I HLM +L++Q V+ LL A I+ Sbjct: 1 MINPFSH-IQDILKRSSKEAARTMGREISVEHLMLSLISQNDSDVNKLLKGADISPMAFS 59 Query: 62 TDINQALNRLPQVEGTGG-----DVQPSQDLVRVLNLCDKLAQKR-GDNFISSELFVLAA 115 +N L + + + SQ ++ + A + +LA Sbjct: 60 GVLNSKLEKRVEETPADNVKENTHIPFSQITDSIIRDSIREANNYEHSKIVEPRHLLLAI 119 Query: 116 LE-SRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAED 156 L + +A+ L G + + + E + +D Sbjct: 120 LRNDKNPVANWLSQLGLSYDRAIEMLYPTDKDEEQKTEEPKD 161 >UniRef50_A3DC71 ATPase AAA-2 n=13 Tax=Clostridiales RepID=A3DC71_CLOTH Length = 803 Score = 630 bits (1626), Expect = e-179, Method: Composition-based stats. Identities = 310/742 (41%), Positives = 441/742 (59%), Gaps = 69/742 (9%) Query: 116 LESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQG 175 +ES G + + + ++ D+ +++ L Y +L +A++G Sbjct: 100 MESMGFKSSKDETESDGKTDREVKDDKNNTRTKTQDKKMPKKKKYLDTYGTNLIVKAKEG 159 Query: 176 KLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGR 235 K+D VIGR+ EI R IQ+L RR KNNPVLIGEPGVGKTAI EGLA RI+N +VP L Sbjct: 160 KIDRVIGRNREIERVIQILNRRNKNNPVLIGEPGVGKTAIAEGLALRIVNRDVPVKLFNA 219 Query: 236 RVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDA 295 V LD+ ++VAG ++RG+FE R+KG++ + K GN+IL IDE+H ++GAG+A+GAM+A Sbjct: 220 EVYVLDLTSIVAGTQFRGQFENRMKGIIEE-CKALGNIILVIDEIHNIMGAGEAEGAMNA 278 Query: 296 GNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKE 355 N+LKPALA+GE+ +GATTLDEYR++IEKD+ALERRFQ V V EPSVE+TI ILRG+K+ Sbjct: 279 ANILKPALAKGEIQVIGATTLDEYRKHIEKDSALERRFQPVLVDEPSVEETIEILRGIKD 338 Query: 356 RYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRL 415 YE +H V+I+D I AA LS RYI DR LPDKAID++DEA S ++ + E + L Sbjct: 339 YYESYHRVKISDEVIRAAVILSERYITDRFLPDKAIDVLDEAGSRANIK-NVVLLEYEAL 397 Query: 416 DRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTI 475 + +++ E++ + ++ L +Q ELE++ K + ++ + Sbjct: 398 KEELKKVQEEKENAVSADSIEDYQKAADLKVRECKLLQQIKELEQKSKDMELTVDDIAYV 457 Query: 476 KAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAE 535 + + R++E++ K+ LE++L + + ++ + + Sbjct: 458 IESWTKIPVQ-----------RLTEIEAEKLLNLEERLHKRVIGQHEAVKSVARAI---- 502 Query: 536 IAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPN 595 RR+RA Sbjct: 503 -------------------------------------------------RRNRADFKKRK 513 Query: 596 RPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVG 655 +P SF+F+GPTGVGKTEL KALA +F S+EA++R+DMSE+MEKH+VS+L+GAPPGYVG Sbjct: 514 KP-ASFIFVGPTGVGKTELVKALAVELFGSEEALIRLDMSEYMEKHTVSKLIGAPPGYVG 572 Query: 656 YEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVI 715 Y+EGG LTE VRR+PYSVILLDE+EKAHPDVFN+LLQ+LDDGR TD GRTV F NTV+I Sbjct: 573 YDEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNMLLQILDDGRATDSHGRTVSFENTVLI 632 Query: 716 MTSNLGSDLIQERFG--ELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIAS 773 MTSN G+ L G +Y ++ V V+ FRPEF+NR+DE++VF+ L + + Sbjct: 633 MTSNAGTSLKASSIGFANDNYIALENKVKEVLKETFRPEFLNRVDEIIVFNHLTKDELKQ 692 Query: 774 IAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQI 833 I + K + + +E + + D + + E GYDP YGARPL+R IQ+ IE+ LA+ Sbjct: 693 IVDLMFKDVVEEVENKKMTVKFQDGVREFILEKGYDPKYGARPLRRTIQRYIEDELAEMY 752 Query: 834 LSGELVPGKVIRLEVNEDRIVA 855 L G L G I + V + IV Sbjct: 753 LKGLLAEGCSIVVGVRDGNIVF 774 >UniRef50_Q53N47 ATP-dependent Clp protease ATP-binding subunit clpA CD4B,chloroplast, putative, expressed n=5 Tax=cellular organisms RepID=Q53N47_ORYSJ Length = 918 Score = 630 bits (1626), Expect = e-179, Method: Composition-based stats. Identities = 322/870 (37%), Positives = 483/870 (55%), Gaps = 88/870 (10%) Query: 1 MRLDRLTN----KFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGIN 56 M++ T + A+ + H + + H L S P++ G+ Sbjct: 117 MQIPEFTPGTGLRSTNAIQRTTEVLQRHSHVGLRQPH-AGRLREMHTASGRPVI---GLT 172 Query: 57 AGQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL 116 + + + + P+ D S++++ + + AQ I S +L+ + Sbjct: 173 PTIVSQKTTK-VPKQPRFVARAID-NFSREVMNAIAVAHDEAQYIAHLTIGSTNILLSLI 230 Query: 117 ESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGK 176 + I +V + L +Y +LT+ AE+GK Sbjct: 231 S---------QYICIFLLEIILNKAYKMFRAAVRRATRGAKLATLMEYGTNLTKLAEEGK 281 Query: 177 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRR 236 LDPV+GR ++I +Q+L RRTKNNP LIGEPGVGKTAI EGLAQ I G+VPE ++ + Sbjct: 282 LDPVVGRQKQIDHVVQILSRRTKNNPCLIGEPGVGKTAIAEGLAQLIATGDVPETIQQKT 341 Query: 237 VLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAG 296 V++LDMG L+AG KYRGE EERLK +L ++ KQ G +ILF+DE+HT+V AG A+GA+DA Sbjct: 342 VISLDMGLLLAGTKYRGELEERLKNILEEI-KQNGEIILFLDEVHTLVTAGSAEGAIDAA 400 Query: 297 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 356 N+ KPALARGEL C+GATT++EYR++IEKDAALERRFQ V Sbjct: 401 NIFKPALARGELQCIGATTINEYRKHIEKDAALERRFQPVK------------------- 441 Query: 357 YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 416 +P+ +D +R + + + Sbjct: 442 -----------------------------IPESTVDETVGILKGLRERYQGHHKVQYTDE 472 Query: 417 RRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476 + +L + + R L ++ D + + A+ ++ Sbjct: 473 ALVAAAELSHKHI----------RDRFLPDKAIDLMDEAGSIVRLRNAQCKPSKKVNDLE 522 Query: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMR---LLRNKVTD 533 AEL++ A + + R +L+ ++ +L + A T + + M + VT+ Sbjct: 523 AELKKTLKEKNDAISIQNFRRAKQLRDHEL-QLRTNISALTDKKTQMMEPDAIAMPVVTE 581 Query: 534 AEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLAD 593 ++ ++RWTG+P+ ++ E KLL++E+ LH RV+GQ EAV AVS AIRR+R GL Sbjct: 582 DDVRHAISRWTGVPLHKVSMDESRKLLKLEEALHRRVVGQGEAVAAVSRAIRRARLGLKH 641 Query: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMFDS----DEAMVRIDMSEFMEKHSVSRLVGA 649 P RP+ S +F GPTGVGK+EL KALA + + S + AMVR+DMSE+MEKH+V+RLVG+ Sbjct: 642 PGRPVASLVFAGPTGVGKSELAKALAAYYYGSSESEEAAMVRLDMSEYMEKHAVARLVGS 701 Query: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709 PPGYV + EGG LTEAVRRRP++V+LLDEVEKAH DVF++LLQVLDDGRLTDG+GRTVDF Sbjct: 702 PPGYVWHGEGGQLTEAVRRRPHAVVLLDEVEKAHRDVFDLLLQVLDDGRLTDGKGRTVDF 761 Query: 710 RNTVVIMTSNLGSDLIQER--FGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLG 767 +NT+++MT+N+GS LI G +K V + +FRPEF+NR+DEV++F PL Sbjct: 762 KNTLIVMTTNIGSSLIVNNGGDGAAAAGRIKNTVTDEMKRHFRPEFLNRLDEVIMFQPLT 821 Query: 768 EQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIEN 827 E + IA I L+ R+ E+G ++ ++D+ +L+ E G+DP YGARPL+RA+ + +E+ Sbjct: 822 ELEVGKIAGIMLEEFAGRVREKGIKLKVTDKFRELVVEEGFDPSYGARPLRRAVVRLLED 881 Query: 828 PLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857 LA+++L+GE+ G + ++ + V+ Sbjct: 882 TLAEKMLAGEVREGDSVIVDADSAGNAVVR 911 >UniRef50_D1Y1U8 Chaperone protein ClpB 1 n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y1U8_9BACT Length = 829 Score = 627 bits (1618), Expect = e-178, Method: Composition-based stats. Identities = 306/856 (35%), Positives = 481/856 (56%), Gaps = 28/856 (3%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M + + + A+A+++A+ D+ I LHL A+L Q+ + L AG++ Sbjct: 1 MDSSKFSQEALRVFAEAKNIAIRCDHAEITDLHLSLAILRQKESEIKYRLLEAGVDLLSY 60 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG 120 + +AL G + S+ R++ + ++++ D ++ + LA L R Sbjct: 61 ERKLTEALQDRRATPGVS-KLYYSRQYHRIVLVSGEISRASFDAYVRTPHLYLAILRDRE 119 Query: 121 TLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPV 180 + + + A T Q++ R S + +Q + L ++ + + A +G +DPV Sbjct: 120 SPSAAIAAEFGVTVESVQSMLAARLTASDELGISPEQMEQLNRFGRNFLKEAREGLMDPV 179 Query: 181 IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL 240 +GRDEEI +VL RR KNNPVLIGE GVGKTA+ EG+AQRI + P L+GR V +L Sbjct: 180 LGRDEEINECFRVLSRRLKNNPVLIGEAGVGKTAVAEGIAQRIAKQDAPALLRGRMVFSL 239 Query: 241 DMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLK 300 DM ALVAG KYRG+FEERLK +L + +G +ILF+DELHT++GAG G+MD N+LK Sbjct: 240 DMAALVAGTKYRGDFEERLKEILEIIKASKGRIILFVDELHTIIGAGSGSGSMDTSNILK 299 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELH 360 P LARGE+ +GATT++EYR+YIE D ALERRFQK+ + EPS E +++LRG+ +YE H Sbjct: 300 PFLARGEILMIGATTVEEYRRYIEPDRALERRFQKILIEEPSEEAALSMLRGVVSKYETH 359 Query: 361 HHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRII 420 H V+I D A++AA LS RYI DR LPDKAIDLIDEA + +RM +DS P+ELD +RRII Sbjct: 360 HRVRIADGALIAAIQLSKRYITDRYLPDKAIDLIDEAGAMVRMSMDSMPQELDEWNRRII 419 Query: 421 QLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELE 480 Q ++E L+ E+D A+++R L ++L+D+ +Y E W+ E L +K + Sbjct: 420 QWEMEHILLLDEADPAAQRRRQTLEKQLADERARYEERFAAWQKEVERLDELSRLKELRD 479 Query: 481 QAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVL 540 + + ++E A+ + + + + ++ ++ + +VT+ EI ++ Sbjct: 480 EVRRSLEDAQEAHRVDDVKRFVAER-QAFDAKIAEIERI--GPHYPVSREVTEEEIKRIV 536 Query: 541 ARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGS 600 A GIP+S + SE EKL + + L +G +AV AV +I R+R+GL RP+GS Sbjct: 537 AVRAGIPLSSIGRSESEKLEQAGKSLLAEFVGHRDAVSAVRQSILRARSGLMKRRRPVGS 596 Query: 601 FLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG 660 FL +GP+G GK+ L + A ++ + + + +M EF +K SV++L+GAPPGYVG++ G Sbjct: 597 FLLVGPSGTGKSYLAELFAKHYYEDERSPLSFNMREFTDKASVNKLIGAPPGYVGHDAAG 656 Query: 661 YLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL 720 LTEAVR RP+SVI+ + V+ A +V +++ ++ DG + D +GRTVDFRN ++ T Sbjct: 657 ALTEAVRLRPHSVIVFESVDHAGAEVLSLIARLAADGEIADNRGRTVDFRNALLFFTVTS 716 Query: 721 GSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLK 780 V R + +D V F + + ++L+ Sbjct: 717 TDRD------------------PPVRELLR----DGLDGVYYFEDFSLRERRELLTLRLR 754 Query: 781 RLYKRLEERGYEIHISDEALKLLSENGYD-PVYGARPLKRAIQQQIENPLAQQILSGELV 839 L + LEE E+ + L ++ G+D GA P+ +++ + LA + L G L Sbjct: 755 ELQRELEEEQIELSWDEATLDAVTA-GFDRAESGAHPVAGYMERTVLADLAAKKLLGRLR 813 Query: 840 PGKVIRLEVNEDRIVA 855 PG + + +V+ Sbjct: 814 PGARVVIRTGGADVVS 829 >UniRef50_B6KUA3 ClpB protein, putative n=3 Tax=Toxoplasma gondii RepID=B6KUA3_TOXGO Length = 970 Score = 622 bits (1604), Expect = e-176, Method: Composition-based stats. Identities = 301/754 (39%), Positives = 446/754 (59%), Gaps = 83/754 (11%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLN-QEGGSVSPLLTSAGINAGQLRTDI 64 ++ + L A+ LA+ ++ I P+H ++ LL Q S+ L G N +L+ + Sbjct: 60 ISRDARDQLDQAEVLAMYMRHRQITPVHFLTVLLEVQGEFSIVRSLEQCGANVYELKKAM 119 Query: 65 NQALNRLPQVEGTG--GDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTL 122 + L +LP +++ + L RV ++AQK I E + + E L Sbjct: 120 SNVLIKLPTSADVEIVDELESTPQLKRVALRALEIAQKDKKQTIGMEHLITSLFE-ENNL 178 Query: 123 ADILKAAGATTANITQAIEQMRGGESVND--------------------QGAEDQRQALK 162 L+ AG + M + D + + ++ Sbjct: 179 RKSLEQAGCNVKVFLEHSTTMYENKFKQDVASRSMKKQPTEGSPATSRAKPDASDEEFVQ 238 Query: 163 KYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQR 222 + +D+T+ A +GKL+PV+GR++EI+ + VL R+ K NP L+GEPGVGKTA+VEGLAQR Sbjct: 239 SFGVDMTKLAAEGKLEPVVGRNKEIKEVLTVLSRKGKGNPCLVGEPGVGKTAVVEGLAQR 298 Query: 223 IINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHT 282 ++ G VP+ L+ + + A+D+GAL+AGA YRGEFE+R+K ++ QEG VILFIDELH Sbjct: 299 LVEGMVPKSLENKILFAVDLGALIAGATYRGEFEKRMKALIRYAVNQEGRVILFIDELHM 358 Query: 283 MVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPS 342 ++GAGK+DG MDA N+LKP +ARGE+ VGATT +EY + IEKDAA+ERR + +F+ EPS Sbjct: 359 LMGAGKSDGTMDAANLLKPPMARGEIRLVGATTQEEY-KIIEKDAAMERRLKPIFIEEPS 417 Query: 343 VEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIR 402 + I ILR L +++E HH ++I+D AIVAA LSH+YI +R+LPDKAIDL+DEAA++ R Sbjct: 418 TDRAIYILRKLSDKFESHHEMKISDEAIVAAVMLSHKYIRNRKLPDKAIDLLDEAAATKR 477 Query: 403 MQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEW 462 ++ D ++L + +K + EE E+Q + E+ Sbjct: 478 VKWD-------------------LRSLNDDEVAMERKNSEQFEEETRKVEQQDQQRIEKQ 518 Query: 463 KAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGK 522 + + ++ E+E E+ L +L Sbjct: 519 NHGDGTEEELKNLEKEIE-----------------------------EQSLHEKQEL--- 546 Query: 523 TMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSN 582 +T ++A+V++ WTGIP++++ + E+ K+LR+ LH RVIGQ++AV AV++ Sbjct: 547 -------VLTADDVAQVISLWTGIPLAKLTDDEKSKILRLSDLLHSRVIGQDDAVKAVAD 599 Query: 583 AIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHS 642 A+ R+RAGL+ P+GSFLFLGPTGVGKTEL KALA MF S++ ++RIDMSEF E HS Sbjct: 600 AMVRARAGLSREGMPVGSFLFLGPTGVGKTELAKALAMEMFHSEKNLIRIDMSEFSEAHS 659 Query: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702 VSRL+G+PPGYVG++ GG LTEAVRRRP+SV+L DE+EK H + NI+LQ+LD+GRLTDG Sbjct: 660 VSRLIGSPPGYVGHDAGGQLTEAVRRRPHSVVLFDEIEKGHQQILNIMLQMLDEGRLTDG 719 Query: 703 QGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAH 736 +G VDF N V+I+TSN+G+ I + + + Sbjct: 720 KGLLVDFTNCVIILTSNVGAQYIISAYEQAEKES 753 Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 34/102 (33%), Positives = 53/102 (51%) Query: 749 FRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGY 808 +PE +NR V++F P+ + I IQ K L L+ +G E+ I A + + + Y Sbjct: 825 LKPEVVNRFSGVIIFEPMNPADVRKILAIQSKDLKNALQRKGIELVIDASAEEFIVQRSY 884 Query: 809 DPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNE 850 +GARPLKR + I +A ILSG L PG + + ++ Sbjct: 885 THKFGARPLKRFVDNHIGAKMAPWILSGYLQPGMRVTVVASK 926 >UniRef50_C7H8Y8 Clp protease, ATP-binding subunit ClpC n=3 Tax=Clostridiales RepID=C7H8Y8_9FIRM Length = 767 Score = 620 bits (1599), Expect = e-176, Method: Composition-based stats. Identities = 300/708 (42%), Positives = 415/708 (58%), Gaps = 68/708 (9%) Query: 150 NDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPG 209 + +R+ L Y +LT +A +GKLD +IGRD EI RTIQ+L RR KNNP LIGE G Sbjct: 123 KNDKKPPRRKFLDTYCENLTRKAREGKLDDIIGRDREIYRTIQILSRRQKNNPCLIGEAG 182 Query: 210 VGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQ 269 VGKTAI EG+A+RI G+VP GL+ + + LD+ +LVAG ++RG+FE+R+KG+L+++ K Sbjct: 183 VGKTAIAEGIAERIAKGQVPAGLQDKEIFLLDLTSLVAGTQFRGQFEQRVKGLLSEV-KA 241 Query: 270 EGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAAL 329 GNVILFIDE+HT+ AG+++GAM+AGN+LKPAL+RGE+ +GATT +EYR+YIEKD AL Sbjct: 242 AGNVILFIDEIHTITSAGESEGAMNAGNILKPALSRGEIQVIGATTFNEYRKYIEKDQAL 301 Query: 330 ERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDK 389 ERRFQ V V EPSV DT+A++ G+K YE HHHVQ+ + A TLS RYI DR LPDK Sbjct: 302 ERRFQPVRVEEPSVADTLAVMGGIKHYYEEHHHVQVPADVLNATVTLSERYITDRYLPDK 361 Query: 390 AIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELS 449 AIDL+DEA + + E + + + LK E+ E+ + ++ E Sbjct: 362 AIDLLDEACACCNLA-HPVISEYLTMQKELEALKQEE--ADMENADVNEPIDYERVAERK 418 Query: 450 DKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPEL 509 + Q +A + T A++ + I ++ E +Y K+ L Sbjct: 419 TRMAQLERELPAKQAAAGEIQVTMDDVAKVIELWTGIPA-------VKIRETEYAKLASL 471 Query: 510 EKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHR 569 E +L+ + + L+ V Sbjct: 472 ETELKKKIIGQDDAVHLVAQAV-------------------------------------- 493 Query: 570 VIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAM 629 +RSRA L+ RP SF+F+GPTGVGKTEL K LAN +FD + + Sbjct: 494 ---------------KRSRADLSGRRRP-ASFIFVGPTGVGKTELVKQLANQLFDGPDPL 537 Query: 630 VRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNI 689 +R+DMSE+MEK++VSR++G+PPGYVGYEE G LTE VRRRPYSV+L DE+EKAHPDV NI Sbjct: 538 IRLDMSEYMEKYAVSRMIGSPPGYVGYEEAGQLTEKVRRRPYSVVLFDEIEKAHPDVMNI 597 Query: 690 LLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQER---FGELDYAHMKELVLGVVS 746 LLQ+LD+G++ D QGRTVDF NTV+ MTSN GS F + +E +S Sbjct: 598 LLQILDEGKINDAQGRTVDFSNTVICMTSNAGSSDQTTASLGFNRSEEERNEEKSRKALS 657 Query: 747 HNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSEN 806 RPEF+ R+DEV+ F PL E+ + IA + L +E +G + AL L Sbjct: 658 QFLRPEFLGRVDEVITFKPLSEETLQGIAALMLDEYKPSMEAKGIAYSYTPAALAALVHK 717 Query: 807 GYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIV 854 +GAR L+R I++ +E+P A++I+ G LV G + ++ D IV Sbjct: 718 SQGGKFGARDLRRTIRKAVEDPAAEKIIDGTLVSGSTLTVDAENDEIV 765 >UniRef50_C7PG59 ATPase AAA-2 domain protein n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PG59_CHIPD Length = 816 Score = 619 bits (1595), Expect = e-175, Method: Composition-based stats. Identities = 284/854 (33%), Positives = 460/854 (53%), Gaps = 56/854 (6%) Query: 1 MRLDRLT---NKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINA 57 M L T + Q A+ AQ+LA H + P HL+ A L++E G ++P L + I+ Sbjct: 1 MTLTTYTIYAPEVQSAIRIAQALAKEHHHANYTPAHLLLACLHKEVG-ITPQLQAMNIDT 59 Query: 58 GQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALE 117 L L+ +P+ + VL D + + D + VL A+ Sbjct: 60 YYLEEWAEVRLDSVPKAGRLPEQPDADEYAANVLQEADAV-RLEYDLDAADAWCVLVAIS 118 Query: 118 SRGTLADI--LKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQG 175 + G LK A + + + + +KY LT+ Sbjct: 119 TPGVGFSFEQLKTFPLQRAQLLSHFNKKDSNGAAPKTTIVTGKSVAQKYIYKLTDPQRLQ 178 Query: 176 KLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGR 235 + GRD E+R +++L R+ +++ ++ GE GVGKTA+ + LA I+ + P L+ Sbjct: 179 AKHALAGRDAEVRTMMEILTRKGRSSILITGEGGVGKTALADALASAILQKQAPLQLQQT 238 Query: 236 RVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDA 295 + ALD GA +AGA Y+ E E+RL+ +++ L + G +LFID LHT++ + A Sbjct: 239 DIYALDYGAFIAGAAYKNELEDRLQQIMSQLQEA-GRHVLFIDNLHTLLDK-QPGSAGGI 296 Query: 296 GNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKE 355 GN+LK A+ +G++ + +T + +R+ IE D L F+ V +AEP +++ + Sbjct: 297 GNVLKAAMNKGDITLIATSTPEGFRKLIEPDGLLRHCFEVVQLAEPDEATAARMIQAVMP 356 Query: 356 RYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRL 415 YE ++++++ I A LS RY+ +R LPD A++L+D ++IR D+ LD L Sbjct: 357 DYESYYNLKVAPEVISEAIKLSRRYLKERSLPDSAVNLLDRTLAAIRTTQDTGKITLDDL 416 Query: 416 DRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTI 475 ++ EA+ + L ++YS L T + Sbjct: 417 KAKL---------------EAAGDSREELRWWYQQCMQRYSALV------------TTRL 449 Query: 476 KAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAE 535 + + + KI E A + L +++L+ P +E Q A VT + Sbjct: 450 QPQQDIYKIDNEAALKTALLDIIAQLE----PLVETQHVA---------------VTGID 490 Query: 536 IAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPN 595 +A ++A TGIP+ ++ ERE+L+ M+ EL RV+GQ+ A+ VS AI SR+GL+ P Sbjct: 491 LATMIAESTGIPLGKIQSGERERLVNMDLELRKRVVGQDHALKTVSEAILESRSGLSRPG 550 Query: 596 RPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVG 655 +PIGSF FLGPTG GKTEL K+LA+F+F + M+R DMSEF E+HS + L GAPPGYVG Sbjct: 551 QPIGSFFFLGPTGTGKTELAKSLADFLFQDERCMIRFDMSEFKEEHSAALLYGAPPGYVG 610 Query: 656 YEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVI 715 YEEGG L +R++PY+V+L DE+EKAHP VF+I LQ++D+G+L D G+T DF N +++ Sbjct: 611 YEEGGLLVNKIRQQPYAVVLFDEIEKAHPSVFDIFLQIMDEGKLHDRLGKTGDFSNALIL 670 Query: 716 MTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIA 775 TSN+GSD+I + F + ++L + +++ NFRPEF+ R+ E+V F P+ ++++ I Sbjct: 671 FTSNIGSDVIAQSFRQGVIPASQQL-MEIMARNFRPEFLGRLTEIVPFGPIQQENVVKIF 729 Query: 776 QIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILS 835 I LK L + L ++ + +S A + L+ GY P+YGARPLK I+ ++ PL++ I+ Sbjct: 730 DIHLKHLLQLLTQQQITLDVSVAAREKLAAEGYSPLYGARPLKEVIRSRLRKPLSRMIIE 789 Query: 836 GELVPGKVIRLEVN 849 G L P ++L+++ Sbjct: 790 GSLQPHTTVKLDID 803 >UniRef50_A6G683 Probable ATP-dependent Clp protease n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G683_9DELT Length = 767 Score = 617 bits (1590), Expect = e-175, Method: Composition-based stats. Identities = 289/787 (36%), Positives = 424/787 (53%), Gaps = 71/787 (9%) Query: 89 RVLNLCDKLAQKRGDNFISSELFVLAALESRGTLA-DILKAAGATTANITQAIEQ----- 142 RVL Q G ++ ++A ++A +L+ G ++T I Sbjct: 5 RVLQRAVLHVQGAGKAEVTGANLLVALFAEPESMAVYLLEQKGVRRRDVTLFISHGIGKG 64 Query: 143 ---------MRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQV 193 G + + L Y +DL RA G +DP++GR++E+ R IQV Sbjct: 65 NSRSAPRSRPTGPGADGEDEDSVADDPLTAYAVDLAARAASGDIDPLVGREQELTRLIQV 124 Query: 194 LQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRG 253 L RR KNNPVL+GEPGVGKTA+VEGLA + + +VPE + + ALDMG+L+AG K+RG Sbjct: 125 LCRRRKNNPVLVGEPGVGKTAVVEGLALAVHDQKVPEPIADAHIYALDMGSLLAGTKFRG 184 Query: 254 EFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGK-ADGAMDAGNMLKPALARGELHCVG 312 +FEERLK V+ + +Q G ILFIDE+HT++GAG + G+MDA NMLKPAL G + C+G Sbjct: 185 QFEERLKAVVAAIEEQPG-AILFIDEIHTVIGAGATSGGSMDASNMLKPALNAGRVRCIG 243 Query: 313 ATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVA 372 ATT EY + ++D AL RRFQK+ + EP+ ++ I IL+GLK YE HH+V T AI Sbjct: 244 ATTYKEY-KNFDRDPALARRFQKIEIVEPTTDEAILILQGLKPAYEAHHNVSYTPDAIEE 302 Query: 373 AATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKE 432 + L+H+Y+ DR+LPD AID++DE ++ R+ K + L Sbjct: 303 SVRLAHKYLRDRRLPDSAIDVMDETGAAARLGDYGKAKPAGAL----------------- 345 Query: 433 SDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRV 492 D E +D + +E + + + Sbjct: 346 ------PAGDEDAPEGADSKEPKAEEAADEMTLAVGETTALERR--------------DP 385 Query: 493 GDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMM 552 G + E + + A + + ++ V+AR IP + Sbjct: 386 GPVIHTGEAAPREAAPGAGEAAEAGEAIIIDVP---------QVETVIARMARIPPKSVS 436 Query: 553 ESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKT 612 +R L + + L + GQ+EAV + AI+R+RAGLA P++PIG FLF GPTGVGKT Sbjct: 437 TDDRAVLKGLGEGLRQVLFGQDEAVATATKAIKRARAGLARPDKPIGCFLFTGPTGVGKT 496 Query: 613 ELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYS 672 EL + LA + +R DMSE+MEKHSVSRL+GAPPGYVG+++GG LT++V + P+S Sbjct: 497 ELARQLARLL---GMPFLRFDMSEYMEKHSVSRLIGAPPGYVGFDQGGQLTDSVAKNPHS 553 Query: 673 VILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERF--G 730 ++LLDE+EKAHPD+F++LLQV+D LTD G+ DFRN ++IMTSN G+ + +R Sbjct: 554 IVLLDEIEKAHPDIFSVLLQVMDSATLTDTTGKKTDFRNVILIMTSNAGAFEMTQRKVGF 613 Query: 731 ELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERG 790 D ++ + F PEF NR+D++V F L + I +A L+ L +L ER Sbjct: 614 GSDDGNVDSAANKALERTFSPEFRNRLDKIVTFGQLPQPVIEKVADKMLRELEIQLSERD 673 Query: 791 YEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVN- 849 + + A +S GYD +GARP+ R I + I+ L ++L G L G + ++ + Sbjct: 674 VRLTWTPAARDWVSRKGYDKKFGARPMARVIDEAIKGALVDELLFGRLEGGGSVEVDCDR 733 Query: 850 -EDRIVA 855 ED +V Sbjct: 734 AEDELVF 740 >UniRef50_A8MFR5 ATPase AAA-2 domain protein n=3 Tax=Clostridiales RepID=A8MFR5_ALKOO Length = 758 Score = 615 bits (1587), Expect = e-174, Method: Composition-based stats. Identities = 317/698 (45%), Positives = 440/698 (63%), Gaps = 73/698 (10%) Query: 160 ALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGL 219 L Y +LT+RA ++D VIGR++EI R +Q+L RR+KNNP+LIGEPGVGKTAI EGL Sbjct: 128 NLDTYGTNLTDRARNKEIDRVIGRNKEIDRVVQILNRRSKNNPILIGEPGVGKTAIAEGL 187 Query: 220 AQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDE 279 A RI+ +VP L V LD+ A+VAG ++RG+FE R+K ++ + A++ GN+IL IDE Sbjct: 188 AGRIVEKQVPAKLFNAEVYLLDLTAIVAGTQFRGQFEGRMKAIIEE-AQECGNIILVIDE 246 Query: 280 LHTMVGAGKADGA-MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFV 338 +H ++GAG+ G M+A N+LKPALARGE+ +GATTLDEYR++IEKD+ALERRFQ V V Sbjct: 247 VHNIMGAGEVHGGVMNAANILKPALARGEIQVIGATTLDEYRKHIEKDSALERRFQPVLV 306 Query: 339 AEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAA 398 EPSVEDTI IL+G+K YE +H V+I+D I AAA +S RYI DR LPDKAID+IDEA Sbjct: 307 EEPSVEDTIEILKGIKGYYEDYHKVKISDEVIEAAAKMSERYITDRYLPDKAIDIIDEAG 366 Query: 399 SSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSEL 458 S + ++ + E I LK+E +A+ ++ EA+KK + E + + Sbjct: 367 SRVNLRNEGLVE--------IEGLKVELKAIEEKKAEAAKKNDYEKAAQYKVDECRILDR 418 Query: 459 EEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQ 518 EE +AE + T A + ++ I + +++E + ++ LE+QL Sbjct: 419 IEELEAEVNKSALTVEDVAFVIESWTNIP-------VGKITEEEASRLLSLEEQLH---- 467 Query: 519 LEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVD 578 R V + L+R Sbjct: 468 ---------RRVVGQKDAVRSLSR------------------------------------ 482 Query: 579 AVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFM 638 IRR+R+G +P SF+F+GPTGVGKTEL +ALA +F S+EAM+R+DMSE+M Sbjct: 483 ----TIRRNRSGFRKKRKP-ASFIFVGPTGVGKTELVRALAEELFGSEEAMIRVDMSEYM 537 Query: 639 EKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGR 698 EKH+VS+L+GAPPGYVGY++GG LT+ VRR+PYSVILLDE+EKAHPDVFN+LLQ+L+DGR Sbjct: 538 EKHTVSKLIGAPPGYVGYDQGGQLTDKVRRKPYSVILLDEIEKAHPDVFNMLLQILEDGR 597 Query: 699 LTDGQGRTVDFRNTVVIMTSNLGSDLIQER--FGELDYAHMKELVLGVVSHNFRPEFINR 756 LTD QGRTV F NTVVIMTSN G+ + FG Y ++ + FRPEF+NR Sbjct: 598 LTDSQGRTVHFENTVVIMTSNAGTQIKSGSMGFGNRGYEALENRAKDALKETFRPEFLNR 657 Query: 757 IDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARP 816 +DE +VF L ++ + I ++ LK + + ++E+G I ISD + E GYD YGARP Sbjct: 658 VDETIVFTQLSKEELREIIELMLKDVIEDVKEKGMTITISDAVKDFILEKGYDEKYGARP 717 Query: 817 LKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIV 854 L+R IQ+ IE+ +A++ + VPG I++++ EDR+V Sbjct: 718 LRRVIQRSIEDEIAEEYIKNTFVPGDHIQVDLKEDRVV 755 >UniRef50_C2MCW4 ATP-dependent Clp protease, ATP-binding subunit ClpC n=2 Tax=Bacteria RepID=C2MCW4_9PORP Length = 1011 Score = 592 bits (1525), Expect = e-167, Method: Composition-based stats. Identities = 268/739 (36%), Positives = 410/739 (55%), Gaps = 69/739 (9%) Query: 123 ADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIG 182 + + + +G+ +++ E + ++ + AL + +L + A+ GKLDP+IG Sbjct: 295 SKVTQNSGSNPFDLSAEGESGKEEKASKKSSKRSKTPALDAFATNLNQLAKDGKLDPMIG 354 Query: 183 RDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDM 242 R +E+ R +L RR KNNPVLIGE GVGKTA+ EGLAQ + EV L+G+ + ++D+ Sbjct: 355 RAKELERITHILCRRQKNNPVLIGEAGVGKTAVAEGLAQLLARDEVSYKLRGKVLYSVDL 414 Query: 243 GALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPA 302 ++AG +YRG+FEER K +L + A+ GN IL DE+HT++GAG +G+MDA NMLKPA Sbjct: 415 AQMLAGTRYRGDFEERFKALLKE-AEMLGNTILLFDEIHTLMGAGSTEGSMDASNMLKPA 473 Query: 303 LARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHH 362 LARG + +GATTLDEYR+ IEK+ AL RRFQKV + EP+ Sbjct: 474 LARGTIQVIGATTLDEYRRTIEKNGALARRFQKVMI-EPNTP------------------ 514 Query: 363 VQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQL 422 + + L RY + Sbjct: 515 ----EETLEILRQLRGRY------------------------------------EEFHHV 534 Query: 423 KLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQA 482 +AL+ ++ D + + K + +++ +L Sbjct: 535 HYSDEALIAMVRLTNRYIYDRYFPDKAIDVLDEVGASMHLKGKLGESDKVASLRQQLRTY 594 Query: 483 KIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLAR 542 + + ++A R + L+ + ++K+++ + V + +A+ ++ Sbjct: 595 RASRDKAVRESNYDTAMTLKVQE-ELVQKEVDEELEKAHAEEAGTYLPVDEEAVAKTVSM 653 Query: 543 WTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFL 602 +G+P+S + + E KL +M Q L VIGQ++A++ V AI+R+R GL RPIGSFL Sbjct: 654 MSGVPISNISQEEHAKLRQMRQTLKDIVIGQDDAINKVVKAIQRNRLGLGSDKRPIGSFL 713 Query: 603 FLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYL 662 FLGPTGVGKT L K LA +FD ++A++RIDMSE+ME +VSRLVGA PGYVGY+EGG L Sbjct: 714 FLGPTGVGKTYLAKKLAELLFDDEDALIRIDMSEYMESFNVSRLVGAAPGYVGYDEGGQL 773 Query: 663 TEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGS 722 TE VRR+PYSV+L DE+EKAHPDV+NILLQ+LDDG +T G V F+NTV+I+TSN+G+ Sbjct: 774 TEQVRRKPYSVVLFDELEKAHPDVYNILLQILDDGFITAADGTHVSFKNTVIILTSNIGT 833 Query: 723 DLIQERFGELDYAHMKELVL--------GVVSHNFRPEFINRIDEVVVFHPLGEQHIASI 774 +++ + + +L + +F PEF+NR+D+ + F L ++ I I Sbjct: 834 RQLKDFGAGVGFRQEVQLSQTEQEALLSKQLKKHFSPEFLNRLDDTIYFASLEKEDIRKI 893 Query: 775 AQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQIL 834 ++L+ + R+ E+GY + ++ A L++ G+D YGARPL+RA++ IE+ L IL Sbjct: 894 VDVELRPIMARITEQGYNLVVTPSAKDKLADVGFDLEYGARPLRRALRHWIEDKLTDLIL 953 Query: 835 SGELVPGKVIRLEVNEDRI 853 GE G +RL V+E + Sbjct: 954 DGEANVGDTVRLRVSEGEL 972 >UniRef50_A8JF08 ClpB chaperone, Hsp100 family (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8JF08_CHLRE Length = 692 Score = 591 bits (1523), Expect = e-167, Method: Composition-based stats. Identities = 311/715 (43%), Positives = 439/715 (61%), Gaps = 56/715 (7%) Query: 152 QGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVG 211 + +E AL +Y DLT A +LDP+IGR +E+R+ VL RRTKNNPV++GE GVG Sbjct: 1 EISEPTPTALSRYGRDLTALARARQLDPLIGRTDELRKLFNVLCRRTKNNPVVLGESGVG 60 Query: 212 KTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEG 271 KTA+VEGLAQRI G+ P LKG ++ALD+G L+AGA + GEFE+R+ VL +L+ Sbjct: 61 KTALVEGLAQRIAAGDCPPALKGAAIIALDLGMLMAGATFPGEFEQRMSAVLKELS---- 116 Query: 272 NVILFIDELHTMVGAGKADGA--MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAAL 329 ILFID++H + G G DA +LKP LARGEL C+GATT D++R++IEKD AL Sbjct: 117 -CILFIDDIHNVTGPNAQQGGGVNDASMLLKPLLARGELRCIGATTPDKFRRFIEKDPAL 175 Query: 330 ERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDK 389 ERRFQ++ +A+P+ + ++ILRGL RYE H ++ITD A+VAA LSHRY ADR LPDK Sbjct: 176 ERRFQQLHIAQPTPPEAMSILRGLGARYEKHPALRITDAALVAAVELSHRYTADRFLPDK 235 Query: 390 AIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKES--DEASKKRLDMLNEE 447 AIDL+DEAA+ +++ +D +P LDR+ RRI QL+ E++ L + + D RL L E Sbjct: 236 AIDLVDEAAARVKLDLDQRPAVLDRIIRRIGQLEAERKLLRRSASVDRRDALRLTELEAE 295 Query: 448 LSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIP 507 L RQ ++ +++ + + + + G +P Sbjct: 296 LGALRRQRDDMTAAVDVQQSEVRREECVGG------------------------RGGVVP 331 Query: 508 ELEKQLEAATQLEGKTMRLL-------RNKVTDAEIAEVLARWTGIPVSRMMESEREKLL 560 + E ++ E L R + E S +E Sbjct: 332 DYEPNSTQNSEEESAAYALTTRGNGGKREGLCVLEALHEELEAEEAGRSEAALAEGADRP 391 Query: 561 RMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALAN 620 + ++E R+IGQ EAV AV++AI RSRAGL DPN PI SFLFLGPTGVGKTEL KALA Sbjct: 392 KTDKERIARIIGQEEAVSAVADAIHRSRAGLKDPNGPIASFLFLGPTGVGKTELAKALAA 451 Query: 621 FMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEV- 679 +F++++AMVR+DMSE+MEKH+VS+L+GAPPGYVG++EGG LTEAVRRRPY+V+L DE+ Sbjct: 452 QLFNAEDAMVRLDMSEYMEKHAVSKLIGAPPGYVGFDEGGQLTEAVRRRPYTVVLFDELI 511 Query: 680 --EKAH--PDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGE---- 731 +H P + + QGRTV F++T++IMTSNLGS I + Sbjct: 512 INPPSHIRPSPYALNPSPTHPPTSPSHQGRTVSFKHTIIIMTSNLGSSEIYKATAGRART 571 Query: 732 -------LDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYK 784 +++++LV+ V +F PEF+NR+DE ++F PL I S+ ++L+ L Sbjct: 572 QLAATPLAADSNIRDLVMDQVRRHFPPEFLNRVDEFIIFEPLTAVQIRSVVALRLRGLVS 631 Query: 785 RLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELV 839 RL E+ + ++D A+ L+ G+DP++GARP+KRAIQ+++E PLAQ +L G+ Sbjct: 632 RLAEKKVRLVLADSAMDHLAAKGFDPIFGARPVKRAIQRELETPLAQALLRGDFE 686 >UniRef50_B6KIW5 Heat shock protein, putative n=3 Tax=Toxoplasma gondii RepID=B6KIW5_TOXGO Length = 983 Score = 590 bits (1520), Expect = e-167, Method: Composition-based stats. Identities = 286/746 (38%), Positives = 417/746 (55%), Gaps = 80/746 (10%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQE-GGSVSPLLTSAGINAGQLRTDI 64 T+ L + LA + + +HL++ LL+ +V L AG + LR D+ Sbjct: 100 FTDAASDLLDCVEQLAWMLQHPELSRVHLVACLLDMPGDTTVPTALEKAGGKSADLRKDM 159 Query: 65 NQALNRLPQ--VEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTL 122 + L R+PQ + G+ + +L RV+ AQ RG + V A Sbjct: 160 HNLLIRMPQSVTPLSYGEARSRSELKRVIIDAYNEAQSRGHRLVGVHDLVTALARCDRFR 219 Query: 123 ADILKAAGATTANITQAIE-----QMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKL 177 A L G + + + E ++ +K + +D+TE+A++GK+ Sbjct: 220 AR-LANVGTDVSVFLKLVTSAFIVHTEAEERKATPARTGSQEWIKTFGVDMTEQAKEGKI 278 Query: 178 DPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRV 237 V GR+ EI + V+ R +K N +LIGEPGVGKTA+VEGLA+RI++G+VP+ L G +V Sbjct: 279 GTVTGREAEIEQITSVMSRMSKANCLLIGEPGVGKTAVVEGLAKRIVDGDVPDALLGVQV 338 Query: 238 LALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGN 297 +LD+G+L++G+ RGEFE R+KG+L+ L + + ILFIDE+HT++GAGKADG MDA N Sbjct: 339 FSLDVGSLLSGSSMRGEFERRMKGILDYLFASDRSTILFIDEIHTLMGAGKADGPMDAAN 398 Query: 298 MLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERY 357 +LKPALARG L +GATT EYR++IE+D A RRF + + EP V TI +L+G+++ Sbjct: 399 LLKPALARGALRVIGATTRAEYRKHIERDMAFARRFVTIEMKEPDVAKTITMLKGIRKNL 458 Query: 358 ELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDR 417 E HH + ITD A+VAAATLS RYI RQLPDKAIDLID+A + ++ + Sbjct: 459 ENHHKLTITDGALVAAATLSDRYIKSRQLPDKAIDLIDDACAIKKV-------------K 505 Query: 418 RIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKA 477 + +L E+ A + ++ A ++ + + Sbjct: 506 SLRRLMNERAA-----------------------NEEKNDNGGSGDASSSANGDGEKKRD 542 Query: 478 ELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIA 537 +LE K+ E A+ D +++ + L + E Sbjct: 543 DLE--KLEAEIAKEAEDADALTDADVADVVSLRTGIPVNKLTE----------------- 583 Query: 538 EVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRP 597 ++R++LL + L +VIGQ EAV+AV+NAI RSRAGLA N P Sbjct: 584 ----------------TDRQRLLSLPASLQAQVIGQEEAVEAVANAIIRSRAGLARRNAP 627 Query: 598 IGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYE 657 IG+FLFLG TGVGKTEL KAL +F ++ ++R+DMSE+ E H+V+RLVG+PPGYV ++ Sbjct: 628 IGTFLFLGSTGVGKTELAKALTAAIFHDEKNLIRLDMSEYSEPHTVARLVGSPPGYVSHD 687 Query: 658 EGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMT 717 EGG LTEAVR+RP+SV+L DE+E AHP+VF LLQ+LD+GRLTD +G TVDF N V+I T Sbjct: 688 EGGQLTEAVRQRPHSVVLFDEIENAHPNVFAYLLQLLDEGRLTDMRGITVDFTNCVIIAT 747 Query: 718 SNLGSDLIQERFGELDYAHMKELVLG 743 SN+G+ I + ++ +G Sbjct: 748 SNIGAKHILAASEKAGDEASGKVTIG 773 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 171/517 (33%), Positives = 266/517 (51%), Gaps = 62/517 (11%) Query: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQ 454 D A + + I+ K ++ + + ++ + K + + K RQ Sbjct: 427 DMAFARRFVTIEMKEPDVAKTITMLKGIRKNLENHHKLTITDGALVAAATLSDRYIKSRQ 486 Query: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLE 514 + + + ++ ++++ L + A E+ G S G + LE Sbjct: 487 LPDKAIDLIDDACAIKKVKSLRR-LMNERAANEEKNDNGGSGDASSSANGDGEKKRDDLE 545 Query: 515 AATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574 K + +TDA++A+V++ TGIPV+++ E++R++LL + L +VIGQ Sbjct: 546 KLEAEIAKEAED-ADALTDADVADVVSLRTGIPVNKLTETDRQRLLSLPASLQAQVIGQE 604 Query: 575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 634 EAV+AV+NAI RSRAGLA N PIG+FLFLG TGVGKTEL KAL +F ++ ++R+DM Sbjct: 605 EAVEAVANAIIRSRAGLARRNAPIGTFLFLGSTGVGKTELAKALTAAIFHDEKNLIRLDM 664 Query: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694 SE+ E H+V+RLVG+PPGYV ++EGG LTEAVR+RP+SV+L DE+E AHP+VF LLQ+L Sbjct: 665 SEYSEPHTVARLVGSPPGYVSHDEGGQLTEAVRQRPHSVVLFDEIENAHPNVFAYLLQLL 724 Query: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLG--------------------------------- 721 D+GRLTD +G TVDF N V+I TSN+G Sbjct: 725 DEGRLTDMRGITVDFTNCVIIATSNIGAKHILAASEKAGDEASGKVTIGHFDSERQQLEH 784 Query: 722 -------SDLIQERFGELDYAHMKELVLGVVSHN-------------------FRPEFIN 755 + + +E G+ + + F+P+ +N Sbjct: 785 IADANAGAQVAEEVNGDKKDSTSPAQEKALARKKVANWKTQARAAVLAEAARVFKPQVLN 844 Query: 756 RIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGAR 815 R+ V++F PL Q + I ++Q K L L E+ ++ + ++A+ + E Y +GAR Sbjct: 845 RMT-VIIFDPLTPQDLKRIFRLQQKGLADLLSEQRIDLVVEEDAVTFVVERAYSRHFGAR 903 Query: 816 PLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDR 852 LKR + I LA ILSG L G ++R+ V++ R Sbjct: 904 RLKRFFDKNITGRLAPWILSGWLRSGMMLRIIVSKTR 940 >UniRef50_Q9S5Z2 ATP-dependent Clp protease ATP-binding subunit clpE n=161 Tax=Bacilli RepID=CLPE_LACLM Length = 748 Score = 588 bits (1517), Expect = e-166, Method: Composition-based stats. Identities = 289/714 (40%), Positives = 423/714 (59%), Gaps = 79/714 (11%) Query: 146 GESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLI 205 + A+ + L+++ I++TE A +G++DPVIGRDEEI+R I++L RRTKNNPVLI Sbjct: 92 PRGPQNPRAKQPKGMLEEFGINITESARRGEIDPVIGRDEEIKRVIEILNRRTKNNPVLI 151 Query: 206 GEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLND 265 GEPGVGKTA+VEGLAQ+I++G+VP+ L+ + V+ LD+ +LV G RG+FEER++ ++++ Sbjct: 152 GEPGVGKTAVVEGLAQKIVDGDVPQKLQNKEVIRLDVVSLVQGTGIRGQFEERMQKLMDE 211 Query: 266 LAKQEGNVILFIDELHTMVGAGKA-DGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324 + K+ +VI+FIDE+H +VGAG A DG MDAGN+LKPALARGEL VGATTL+EYR IE Sbjct: 212 IRKRN-DVIMFIDEIHEIVGAGSAGDGNMDAGNILKPALARGELQLVGATTLNEYR-IIE 269 Query: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384 KDAALERR Q V++ +P++ Sbjct: 270 KDAALERRMQP---------------------------VKVDEPSV-------------- 288 Query: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444 D+ I ++ + +K +A+ + +++ D Sbjct: 289 ---DETITILRGIQARY---------------EDYHHVKYTDEAIEAAAHLSNRYIQDRF 330 Query: 445 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS--ELQ 502 L DK + K + I + A+ +A + D + + Q Sbjct: 331 ---LPDKAIDLLDESGSKKNLTLKFVDPEDINRRIADAESKKNEATKAEDFEKAAHFRDQ 387 Query: 503 YGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRM 562 K+ EL+KQ + +T+ +I +++ + T IPV + E E+ +L+ + Sbjct: 388 ISKLRELQKQEVTDEDMP---------VITEKDIEQIVEQKTQIPVGDLKEKEQTQLINL 438 Query: 563 EQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFM 622 +L VIGQ+EAVD +S AIRRSR GL PNRPIGSFLF+GPTGVGKTEL K LA + Sbjct: 439 ADDLKAHVIGQDEAVDKISKAIRRSRVGLGKPNRPIGSFLFVGPTGVGKTELAKQLAKEL 498 Query: 623 FDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKA 682 F S E+M+R DMSE+MEKHSV++L+GAPPGYVGYEE G LTE VRR PYS+ILLDE+EKA Sbjct: 499 FGSSESMIRFDMSEYMEKHSVAKLIGAPPGYVGYEEAGQLTERVRRNPYSLILLDEIEKA 558 Query: 683 HPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAH-MKELV 741 HPDV ++ LQ+L+DGRLTD QGRTV F+++++IMTSN G+ ++ G + V Sbjct: 559 HPDVMHMFLQILEDGRLTDAQGRTVSFKDSLIIMTSNAGTGKVEASVGFGAAREGRTKSV 618 Query: 742 LGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALK 801 LG + F PEF+NR D ++ F L ++++ I + L + +++ + ++ A + Sbjct: 619 LGQLGDFFSPEFMNRFDGIIEFSALSKENLLKIVDLMLDEVNEQIGRNDIHLSVTQAAKE 678 Query: 802 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855 L + GY+P GARPL+R IQ+ IE+ +A + E K + ++ +D+IV Sbjct: 679 KLVDLGYNPAMGARPLRRIIQENIEDSIADFYI--EHPEYKQLVADLIDDKIVI 730 >UniRef50_Q9KAV7 ATP-dependent proteinase n=3 Tax=Bacillus RepID=Q9KAV7_BACHD Length = 711 Score = 586 bits (1510), Expect = e-165, Method: Composition-based stats. Identities = 293/733 (39%), Positives = 428/733 (58%), Gaps = 79/733 (10%) Query: 120 GTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDP 179 + ++ K +T++ +Q ++ + L ++ ++T A+ G++DP Sbjct: 46 SSFDNMFKQWIGSTSSSMNGSDQPVSSIAMKSKTNHSGGGFLDQHGRNVTAEAKAGQIDP 105 Query: 180 VIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLA 239 VIGRD+E+ R IQ+L RRTKNNPVLIGE GVGKTAIVEG A+RI G VP +K + V Sbjct: 106 VIGRDQEVERLIQILCRRTKNNPVLIGEAGVGKTAIVEGFARRIAEGNVPAKMKNKEVYE 165 Query: 240 LDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGK-ADGAMDAGNM 298 L++ +LVAG YRG+FEE+++ ++ +L ++ +VILFIDE+H +VGAG ++G+MDAGN+ Sbjct: 166 LELSSLVAGTSYRGQFEEKMEQLVRELEARD-DVILFIDEIHMVVGAGATSEGSMDAGNI 224 Query: 299 LKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYE 358 LKPALARG+L +GATTL+EYR+ IEKD ALERRFQ + Sbjct: 225 LKPALARGQLQIIGATTLNEYRK-IEKDPALERRFQPI---------------------- 261 Query: 359 LHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418 + +P + AA + K + I EA + D E RL R Sbjct: 262 -----TVKEPTLEAAVEI-----------LKGVRPIYEAYHHVSY-PDDVLEACVRLSDR 304 Query: 419 IIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAE 478 IQ + L DK + + + +K Sbjct: 305 YIQDRF-----------------------LPDKAIDLMDEIGSALTLTSGPTTLDELKER 341 Query: 479 LEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAE 538 L + +QA D R ++L+ + L KQ+ R + +VT A+I Sbjct: 342 LAEITKEKQQATAQEDYERAAKLRDEE-NLLHKQMNE--------NRAEKTEVTVADIQG 392 Query: 539 VLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPI 598 ++ + TGIPV ++ ++E+ K+ + L +VIGQ EAV+ V+ AI+RSRAGL NRPI Sbjct: 393 LIEKRTGIPVRKLQKAEQTKMKDLHNRLARQVIGQAEAVEKVAKAIKRSRAGLKPKNRPI 452 Query: 599 GSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEE 658 SF+F+GPTGVGKTEL K LA +F S EAM+R+DMSEFMEKHSVS+L+G+PPGYVG++E Sbjct: 453 -SFMFVGPTGVGKTELTKTLAQELFGSKEAMIRLDMSEFMEKHSVSKLIGSPPGYVGHDE 511 Query: 659 GGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTS 718 GG LTE VRR+PYS+ILLDE+EKAHPDV ++ LQ+L+DGRLTD QGR V F++TV+IMTS Sbjct: 512 GGQLTEQVRRKPYSIILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRAVSFKDTVIIMTS 571 Query: 719 N--LGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQ 776 N +G I F + K +L ++ F+PEF+NR+D ++ F+ L EQ + I Sbjct: 572 NAGVGVKKITVGFEKNVETQNKAGILEQINQYFKPEFLNRLDAIIEFNHLTEQDLMRIVD 631 Query: 777 IQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSG 836 + L+ L RL E+ + +S++A L + G D +GARPL+RAIQ +E+ + ++++ Sbjct: 632 LMLQDLGDRLAEQDISLTVSEKAKAQLVKIGSDRAFGARPLRRAIQDHVEDSITEKLIDE 691 Query: 837 ELVPGKVIRLEVN 849 E + I ++ + Sbjct: 692 ESINA--IHVDYD 702 >UniRef50_C4RIQ4 ATPase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RIQ4_9ACTO Length = 832 Score = 584 bits (1506), Expect = e-165, Method: Composition-based stats. Identities = 306/532 (57%), Positives = 398/532 (74%), Gaps = 5/532 (0%) Query: 324 EKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIAD 383 EKD ALERRFQ V V EP++ DTI ILRGLKERYE+HH V+ITD A+VAAA LS RYI D Sbjct: 295 EKDPALERRFQPVLVGEPTIADTIGILRGLKERYEVHHGVRITDAALVAAAALSDRYITD 354 Query: 384 RQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDM 443 R LPDKAIDL+DE+AS +RM+IDS+P E+D ++R + +L++E+ AL KE D AS +RL+ Sbjct: 355 RFLPDKAIDLVDESASRLRMEIDSRPVEVDEIERAVRRLEIEEMALAKEPDAASAERLER 414 Query: 444 LNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQY 503 L +EL+DK Q + L E W+ EK+ ++ T K ELE+ E+A R G+L R +EL+Y Sbjct: 415 LRKELADKREQLTALSERWQTEKSHITKLSTAKEELERLGGEAERAERDGELERAAELRY 474 Query: 504 GKIPELEKQLEAATQLEGK---TMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLL 560 G+IP L+ L A + + +L+ +V +IA V+A WTGIP R++E E KLL Sbjct: 475 GRIPALKNDLAKAEEELARLQADGAMLKEEVGADDIATVVASWTGIPAGRLLEGETAKLL 534 Query: 561 RMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALAN 620 RME+ L RV+GQ EAV AVS+A+RR+RAG+ADP+RP GSFLFLGPTGVGKTEL KALA Sbjct: 535 RMEESLGARVVGQTEAVSAVSDAVRRARAGVADPDRPTGSFLFLGPTGVGKTELAKALAE 594 Query: 621 FMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVE 680 F+FD + AMVRIDMSE+ EKHSV+RLVGAPPGYVGYEEGG LTEAVRRRPYSVILLDEVE Sbjct: 595 FLFDDERAMVRIDMSEYGEKHSVARLVGAPPGYVGYEEGGQLTEAVRRRPYSVILLDEVE 654 Query: 681 KAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKEL 740 KAHPDVF++LLQVLDDGRLTDGQGRTVDFRN ++I+TSNLGS +I + L +E Sbjct: 655 KAHPDVFDVLLQVLDDGRLTDGQGRTVDFRNAILILTSNLGSSMISDLT--LAEEQRREG 712 Query: 741 VLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEAL 800 VL VV +F+PEF+NR+D++VVF L + +I IQL R+ RL +R + +S+ A Sbjct: 713 VLAVVRSHFKPEFLNRLDDIVVFAALLGDDLRAIVDIQLDRMRARLADRRLALDVSEAAR 772 Query: 801 KLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDR 852 L+E+GYDP+YGARP++R +Q I + LA+ +LSG + G +++++ + + Sbjct: 773 GWLAEHGYDPIYGARPVRRLVQSAIGDQLARALLSGAIRDGDTVQVDLADGK 824 >UniRef50_UPI000185C840 putative chaperone protein n=1 Tax=Capnocytophaga sputigena ATCC 33612 RepID=UPI000185C840 Length = 825 Score = 578 bits (1489), Expect = e-163, Method: Composition-based stats. Identities = 278/863 (32%), Positives = 454/863 (52%), Gaps = 57/863 (6%) Query: 1 MRLDRLT--NKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAG 58 M +L+ + AL AQ +A + N HL+ A+LN++ + LL S G++ Sbjct: 1 MEEKKLSYAPEVTKALEIAQKIARENMNARYSGGHLLKAVLNRDLPLL-KLLESKGVDVF 59 Query: 59 QLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES 118 L + + T P + + + + + + + IS +A L + Sbjct: 60 YLEEWAEVRIEEALKATNTYSC-DPDEVIDTIFTEAEAIREILDEEEISLWDVFIA-LST 117 Query: 119 RGTLADI--LKAAGATTANITQAIEQMRGG---ESVNDQGAEDQRQALKKYTIDLTE--R 171 +G + +K T A + + + + + L+KY ++ + + Sbjct: 118 QGVAFNFDQMKTYPVTRAELLETTPLPAASAEKPFSSAPLSSTAKGFLQKYCVNKKDVLK 177 Query: 172 AEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEG 231 A+ K P +GR E ++ ++L R +K N ++IG+ G+GKT ++ Q++I+ +VP+ Sbjct: 178 AKASKEIP-VGRVAETQKITEILCRFSKQNVLIIGDSGIGKTTLINSFVQKVISNQVPDV 236 Query: 232 LKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADG 291 L V LDMGAL+AGA Y+GE E+R+K + +L + +L I+ELH ++G Sbjct: 237 LSNLAVFELDMGALIAGASYKGEIEDRIKNIAQELKQYP-KSVLIIEELHALLGN---SF 292 Query: 292 AMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILR 351 N+LK L +G L +G +T+DE+ + IEK + LE F+KV + E E +LR Sbjct: 293 DSSMANLLKSELTKG-LTVIGTSTIDEFTKKIEK-SGLEPLFEKVELQESDDETHFRMLR 350 Query: 352 GLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEE 411 YE HHH+ ITD AI A LS RY+ ++ LP AIDLID S ++ S +E Sbjct: 351 QTLSAYENHHHIAITDEAIWEAIRLSKRYLKEKSLPASAIDLIDHTMSVVKTAGASFLKE 410 Query: 412 LDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSG 471 + L +II L+ Q + + W L+ Sbjct: 411 KNALLTQIIHLEDNTQGFT----------------------EEQRKKNAAW-----LLND 443 Query: 472 TQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKV 531 + L A +E+ + + L YG+ K + A ++ + R+ + Sbjct: 444 IKQRIPFLLDASTLLEEEQTTTFETADNLLSYGR-----KLITEAEKVAQEK----RSHI 494 Query: 532 TDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGL 591 T+ ++A ++++ T IP+ ++ E E+++L M+ L RV+GQ+ A+ +S A+ +R+GL Sbjct: 495 TEWDLAVLISQKTNIPIGKLKEEEKQRLSDMDAILSERVVGQDHAIAIISEAVLENRSGL 554 Query: 592 ADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPP 651 + +PIGSF FLGPTG GKTEL K+LA F+F + A++R DMSEF E+HS + L GAPP Sbjct: 555 SKAGQPIGSFFFLGPTGTGKTELAKSLAEFLFQDENAIIRFDMSEFKEEHSAALLYGAPP 614 Query: 652 GYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRN 711 GYVGYEEGG L +R++PYS++L DE+EKAH VF++ LQ++D+G+L D G+ DF N Sbjct: 615 GYVGYEEGGLLVNKIRQKPYSIVLFDEIEKAHASVFDVFLQIMDEGKLHDRLGKEGDFSN 674 Query: 712 TVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHI 771 +++ TSN+GSD I + F E + L L ++S FRPEF+ R+ E+V F P+ +++ Sbjct: 675 AIILFTSNIGSDFIVKSFTEGNIPSSSTL-LEIMSRYFRPEFLGRLTEIVPFAPISKENA 733 Query: 772 ASIAQIQL-KRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLA 830 I +I L K L E ++I+ E + L+E GYD YGARPLK I+ ++ PLA Sbjct: 734 LKIFEIHLKKELLNLTEGINISLNIAQEVKEHLAEQGYDATYGARPLKGIIRAKLRRPLA 793 Query: 831 QQILSGELVPGKVIRLEVNEDRI 853 +++++GE G I + + + Sbjct: 794 KKLVAGEFKEGDTIEVLWENNEV 816 >UniRef50_C4I651 Type VI secretion ATPase, ClpV1 family n=52 Tax=Proteobacteria RepID=C4I651_BURPS Length = 979 Score = 572 bits (1474), Expect = e-161, Method: Composition-based stats. Identities = 299/940 (31%), Positives = 444/940 (47%), Gaps = 97/940 (10%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +L A+ A N ++E +H + LL Q + ++ AGI L Sbjct: 9 FGKLGATLFRAIESATVFCKLRGNPYVELVHWLQQLLQQSDSDLHRIVRHAGIERDALDR 68 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKR-GDNFISSELFVLAALESRGT 121 DI +AL LP G+ D S + + LA R GD I V A +++ Sbjct: 69 DIARALAALPAGAGSISD--FSHHVETAIERAWVLATLRFGDRRIRGAWLVAALVDTPEL 126 Query: 122 LADILKAAGA--------------------TTANITQAIEQMR-----GGESVNDQGAED 156 +L + A + + + GE A Sbjct: 127 RRVLLSISPAFARIPHDDALDDVLPAWTAGSPEAADAPYDHVDSAPASPGEPSGATRAAP 186 Query: 157 QRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIV 216 L++Y DLT RA G +DPVIGR+ EIR VL RR +NNP+L GE GVGKTA+V Sbjct: 187 NGSPLERYCTDLTARARDGDIDPVIGRELEIRTMTDVLLRRRQNNPLLTGEAGVGKTAVV 246 Query: 217 EGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILF 276 EGLA I NG+VP L R++++D+GAL+AGA +GEFE RLKGVL AK VILF Sbjct: 247 EGLALAIANGDVPPKLADVRLMSVDVGALLAGAGMKGEFESRLKGVLEAAAKSVAPVILF 306 Query: 277 IDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKV 336 +DE+HT++GAG G DA N+LKPALARG + +GATT EY+++IEKD AL RRFQ + Sbjct: 307 VDEIHTLIGAGGQAGTGDAANLLKPALARGTIRTIGATTWAEYKRHIEKDPALTRRFQVL 366 Query: 337 FV---AEPSV--------------------EDTIAILRGLKERYELHHH-----VQITDP 368 V EP+ ++ I L RY H + + D Sbjct: 367 QVPEPEEPAAVHMVRGVARAFARHHRVTVRDEAIRAAVALSHRYIPSRHLPDKAISLLDT 426 Query: 369 AIVAAATLSH-------RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQ 421 A A LS +++ R L +A + E + I + + + Sbjct: 427 AC-ARVALSQHAAPGELQHVRQRLLAARAERDLLEQEARIGLDAGQSLAAVRERIEALAA 485 Query: 422 LKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE--EWKAEKASLSGTQTIKAEL 479 + A K +A++ L L++ R+ +A ++ + Sbjct: 486 EEAAVDARWKAQADAARALLAAREAALAECHRESCAETRAGSLSESRAESRTESRARSHI 545 Query: 480 EQAKIAIEQARRVGDLARMSELQYGKIPELE-------------------------KQLE 514 + + A + + + P+ ++LE Sbjct: 546 DSSAYAHSDVPAEMHVGSHAGSRAATRPDTHAEAHAAPASPPPAADTPHAGAAPGLRELE 605 Query: 515 AATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574 A L+ +V +A +A+++A WTGIPV RMM E + + L RVIGQ Sbjct: 606 RALAAAQGDAPLVFPEVDEAIVAQIVADWTGIPVGRMMTDEVAAVRALPATLEARVIGQP 665 Query: 575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 634 +A+ + ++ +RAGLADP +P+G FL GP+GVGKTE ALA ++ +++++ I+M Sbjct: 666 DALRQIGERVQTARAGLADPKKPLGVFLLAGPSGVGKTETALALAEALYGGEQSLITINM 725 Query: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694 SE+ E H+VS L GAPPGYVGY EGG LTEAVRRRPYSV+LLDE+EKAH DV + QV Sbjct: 726 SEYQEAHTVSGLKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDEIEKAHRDVHELFFQVF 785 Query: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGE----LDYAHMKELVLGVVSHNFR 750 D G + DG GR +DFRNT +++TSN+G++L + D A +++ ++ + F Sbjct: 786 DKGYMEDGDGRYIDFRNTTILLTSNVGAELSASLCADASLAPDAAALRDALMPELLKVFP 845 Query: 751 PEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERG-YEIHISDEALKLLSENGYD 809 F+ R+ VV + PL + +A I ++ L R+ R+ ER + D + + Sbjct: 846 AAFLGRV-SVVPYRPLEARALARIVRLHLDRVVARMAERHRIALAYDDAVVDYVVGRCLV 904 Query: 810 PVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVN 849 GAR L I+Q + L+ L + R+++ Sbjct: 905 QETGARLLIGFIEQHVLPRLSALWLDAFPSKAALARIDIG 944 >UniRef50_A5FES3 ATPase AAA-2 domain protein n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FES3_FLAJ1 Length = 819 Score = 569 bits (1467), Expect = e-160, Method: Composition-based stats. Identities = 260/863 (30%), Positives = 451/863 (52%), Gaps = 57/863 (6%) Query: 1 MRLDR--LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAG 58 M ++ + + AL A+ +A + N++ HL+ A+LN++ + L + G + Sbjct: 1 MEEEKNVFSAELLSALEIAKKIAKTNLNKYYSASHLLKAVLNRDLSLLKR-LEAMGKDVY 59 Query: 59 QLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALE- 117 L + P+ D +PS + ++ + + ++ IS ++A Sbjct: 60 YLDEWAEVRIEEEPKTTHVL-DAEPSDLIDEIIKEAESVRIALNEDEISLYAVIIALSSP 118 Query: 118 SRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKL 177 G D +K+ + + + +Q+ ++ + E ++ L KY I + K Sbjct: 119 GVGFNFDQMKSYPISRNELLE--DQIVIPQTESGAKQEVKKGFLSKYCIHKNLE-KNKKR 175 Query: 178 DPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRV 237 P IGR+ E+ ++L R +K N +LIG+ G+GK+ +++ L Q +I +VP+ L ++ Sbjct: 176 IPAIGREAELNAIKEILCRFSKPNVLLIGDRGIGKSILIDTLVQNVITNQVPDALNKVQL 235 Query: 238 LALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGN 297 LD+ +L+AGA Y+GE E+RLK + +L + +++ + K G N Sbjct: 236 FELDLSSLIAGASYKGEIEDRLKNCIQELKQYPRAILIIE---EIHILLDKNGGDSGVSN 292 Query: 298 MLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERY 357 +LK LA+G L+ + +T+DE+ + IEK+ L F+ V + E E ++R + Y Sbjct: 293 VLKGELAKG-LNIIATSTIDEFSKRIEKEQGLSGMFEIVKLEESDDETLFRMIRESIKTY 351 Query: 358 ELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDR 417 + HH +QI D I + LS RY+ ++ LP+ AI+LID S ++ ++ E + Sbjct: 352 QEHHKIQIDDETISESIRLSRRYLKEKSLPESAINLIDHTMSVLKTSGETFLNEKQSIIN 411 Query: 418 RIIQLKLEQQALMKES--DEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTI 475 R+ LK L ++ E + +D++N+ + + ++ ++ L+ + + Sbjct: 412 RLNLLKENTSNLSEDQLIKEYNWFLVDLINKTTFLMDVDEQNEKRNFETSESILNYIENL 471 Query: 476 KAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAE 535 LE EK L+ + +E + L Sbjct: 472 IKTLE-----------------------------EKALDKRSHIEAFDLSL--------- 493 Query: 536 IAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPN 595 ++A+ TGIP ++ E E++KL +E+ L+ RVIGQ+ + V+ +I +R+GL+ Sbjct: 494 ---IIAKKTGIPAGKLKEEEKQKLNNIEEVLNRRVIGQDHCIATVAGSILEARSGLSKAG 550 Query: 596 RPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVG 655 +PI SF FLGPTG GKTEL K+LA F+F + A++R DMSEF E+HS + L GAPPGYVG Sbjct: 551 QPIASFFFLGPTGTGKTELAKSLAEFLFQDENAIIRFDMSEFKEEHSAALLYGAPPGYVG 610 Query: 656 YEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVI 715 YEEGG L +R++PYS++L DE+EKAHP VF++ LQ++D+G+L D G+ DF N +++ Sbjct: 611 YEEGGLLVNKIRQKPYSIVLFDEIEKAHPSVFDVFLQIMDEGKLHDRLGKEGDFSNAIIL 670 Query: 716 MTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIA 775 TSN+G+D I F + L + ++ + FRPEF+ R+ E+V F P+ +++ I Sbjct: 671 FTSNIGADHIVNTFNNGEIPTSGSL-MEIMGNYFRPEFLGRLTEIVPFAPISKENALKIF 729 Query: 776 QIQL-KRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQIL 834 +I L K L+ ++ I EA L+ENGY+ YGARP+K I+ + PLA++I+ Sbjct: 730 EIHLKKEFMDLLKNINIKVEIPMEAKLYLAENGYNAKYGARPIKSIIRSHLRRPLAKKII 789 Query: 835 SGELVPGKVIRLEVNEDRIVAVQ 857 SGE+ G I + + + + V+ Sbjct: 790 SGEVKDGDTISVTIENNEVKWVK 812 >UniRef50_UPI0001C3229B ATPase AAA-2 domain protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3229B Length = 761 Score = 557 bits (1436), Expect = e-157, Method: Composition-based stats. Identities = 300/699 (42%), Positives = 424/699 (60%), Gaps = 68/699 (9%) Query: 155 EDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214 + L ++ DLTE A G++D VIGRD+EI +TI+VL RR KNN VLIGE GVGKTA Sbjct: 100 DSSTPTLDQFGRDLTEDARVGRIDAVIGRDDEIEQTIEVLARRRKNNAVLIGEAGVGKTA 159 Query: 215 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 274 I EGLA RI EVPE L+ R++++D+G +VAGA++RG+FE+RLK L ++ +G V+ Sbjct: 160 IAEGLALRIARNEVPETLREVRIVSVDLGGMVAGAQFRGQFEQRLKTALEEVVATDGKVV 219 Query: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334 LFIDELHT+VGAG A+GAMDA N+LKP LARGEL VGATTL EYR+ IEKD AL RRF Sbjct: 220 LFIDELHTIVGAGGAEGAMDAANLLKPLLARGELRVVGATTLAEYRK-IEKDGALARRFA 278 Query: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394 V V EPSVE T+AILRGL+ YE HH V+I D A+ AAA LS RY+ + LPDKAIDL+ Sbjct: 279 AVHVEEPSVEATVAILRGLRPAYEEHHGVKIADAALDAAARLSDRYVTEYHLPDKAIDLM 338 Query: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQ 454 D+A++ R+ + + ++ RL R + L+ E+QA + D + + L + + E+Q Sbjct: 339 DQASA--RVHLHGERSDVARLQRELHYLQAEKQAAV---DAEAYEDAADLRKRIDGVEQQ 393 Query: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVG-DLARMSELQYGKIPELEKQL 513 + L + +S T T + + +A A R G + + + K+ ELE L Sbjct: 394 LAALAADGADAASSTGDTGTASLAVTETDVAAVVAARTGIPVGELVAGELEKLQELEADL 453 Query: 514 EAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQ 573 A + + +A+ + R +R+ SE ++ L L +G+ Sbjct: 454 HARVVGQDGAV---------ETVADTIRR------ARVGLSEGDRPLGTFLFLGPTGVGK 498 Query: 574 NEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRID 633 E V AL+ +F +++++VRID Sbjct: 499 TELVK--------------------------------------ALSERLFGTEKSLVRID 520 Query: 634 MSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQV 693 MSEF E H+V+RL+G+PPGYVGY +GG LTE VRRRPYSV+LLDE+EKAHP+V+N+LLQV Sbjct: 521 MSEFREPHTVARLIGSPPGYVGYGDGGQLTEPVRRRPYSVVLLDEIEKAHPEVWNVLLQV 580 Query: 694 LDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERF-------GELDYAHMKELVLGVVS 746 +DDGRLTDG+GRTVDF NTV++MTSNLG+ +++ GE + + ++ Sbjct: 581 MDDGRLTDGEGRTVDFANTVLVMTSNLGAPKSKKQALGFATSDGEGERGDVAAQMVAAAK 640 Query: 747 HNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLE-ERGYEIHISDEALKLLSE 805 F PEF+NRIDE+VVF L + + I ++ ++R+ +RL ER E+ + + + LS Sbjct: 641 RAFLPEFVNRIDELVVFDALSAEQVERIGELIVERVEERLASERDIELEVEPKLIARLSR 700 Query: 806 NGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVI 844 G+DP YGARPL+R +++ +E L + I+ G L G + Sbjct: 701 EGFDPEYGARPLQRHVRRTLEKELTKAIVEGRLNDGDRV 739 >UniRef50_Q6GDQ0 ATP-dependent Clp protease ATP-binding subunit clpL n=194 Tax=cellular organisms RepID=CLPL_STAAR Length = 701 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 260/704 (36%), Positives = 393/704 (55%), Gaps = 85/704 (12%) Query: 156 DQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAI 215 L++ +LT+ A G LDPVIGRD+EI+ T +VL RRTKNNP+L+GE GVGKTAI Sbjct: 76 GNGNYLEQIGRNLTQEARDGLLDPVIGRDKEIQETAEVLSRRTKNNPILVGEAGVGKTAI 135 Query: 216 VEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVIL 275 VEGLAQ I+ G VP +K + ++++D+ +L AG +YRG FEE ++ ++ + K N +L Sbjct: 136 VEGLAQAIVEGNVPAAIKDKEIISIDISSLEAGTQYRGAFEENIQKLVEGV-KSSQNAVL 194 Query: 276 FIDELHTMVGAGKA---DGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERR 332 F DE+H ++G+G G+ ++LKPAL+RGE+ +GATT DEYR I KDAAL RR Sbjct: 195 FFDEIHQIIGSGATGSDSGSKGLSDILKPALSRGEISIIGATTQDEYRNNIMKDAALTRR 254 Query: 333 FQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAID 392 F +V V EPS +DT+ IL+G++E++E HH V++ D + A LS +YI R LPDKAID Sbjct: 255 FNEVLVNEPSAKDTVEILKGIREKFETHHQVKLPDDVLKACVDLSIQYIPQRLLPDKAID 314 Query: 393 LIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKE 452 ++D A+ + S + ++RI +L+ + Sbjct: 315 VLDITAA--HLSAQSPAIDKVTTEKRISELE---------------------------HD 345 Query: 453 RQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQ 512 ++ + EE+K ++++ +LE + V D++ + + IP + Sbjct: 346 KRKAVSAEEYKKADDIQKEIKSLQDKLENSNGEHTAVATVHDISDTIQ-RLTGIPVSQMD 404 Query: 513 LEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIG 572 +L+ + RL + Sbjct: 405 ANDIERLKNISSRLRSKIIGQD-------------------------------------- 426 Query: 573 QNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRI 632 +AV+ VS AIRR+RAG D NRPIGSFLF+GPTGVGKTEL K LA +F + EA++R+ Sbjct: 427 --KAVEMVSRAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLAIDLFGNKEALIRL 484 Query: 633 DMSEFMEKHSVSRLVGAPPGYVGYEE-GGYLTEAVRRRPYSVILLDEVEKAHPDVFNILL 691 DMSE+ + +VS+++G GYVGY++ LTE VRR PYSVIL DE+EKA+P + +LL Sbjct: 485 DMSEYSDTTAVSKMIGTTAGYVGYDDNSNTLTEKVRRNPYSVILFDEIEKANPQILTLLL 544 Query: 692 QVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRP 751 QV+DDG LTDGQG ++F+NT++I TSN G ++ ++ + FRP Sbjct: 545 QVMDDGNLTDGQGNVINFKNTIIICTSNAG--------FGNGNDTEEKDIMHEMKKFFRP 596 Query: 752 EFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPV 811 EF+NR + +V F L + + I + L + L+++G + +S +A L E GYD Sbjct: 597 EFLNRFNGIVEFLHLDKDALQDIVNLLLDDVQVTLDKKGITMDVSQDAKDWLIEEGYDEE 656 Query: 812 YGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855 GARPL+R ++QQ+ + + L K + ++V ++ +V Sbjct: 657 LGARPLRRIVEQQVRDKITDYYLDH--TDVKHVDIDVEDNELVV 698 >UniRef50_D1QW31 Chaperone protein ClpB n=1 Tax=Prevotella oris F0302 RepID=D1QW31_9BACT Length = 815 Score = 546 bits (1408), Expect = e-153, Method: Composition-based stats. Identities = 249/855 (29%), Positives = 428/855 (50%), Gaps = 49/855 (5%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M + A+ A+++A + HL +A++ ++ G + +LTS + + Sbjct: 1 MNEQNYSTSLLAAIKLAKAMARQDKHHSYGVAHLATAMMTEQTG-LREILTSMQKDVAYI 59 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG 120 + D+ ++ VL+ ++ K G +++ + A + Sbjct: 60 MDWFDTHKEMYISSGNEASDIIADGEVKLVLDEAERSKIKLGTDYVDALCVFTAIVRDGV 119 Query: 121 TLA-DILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDP 179 + ++ G + +I ++ G S G E + + +Y DL + Sbjct: 120 VYSHQQIEGLGVSEEDI---LDYFNAGASPFSIGEEQEMPSSIQYASDLKRPEILEEGKT 176 Query: 180 VIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLA 239 +IGR +E+R ++ L+R +L+G PG+GKTAIV+ LA + + + E + ++ Sbjct: 177 IIGRSKEVRLILENLERAENKAVLLVGAPGIGKTAIVKALAHEVASNK-DELINQTALVN 235 Query: 240 LDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNML 299 L+ ++A E +++ +L L + +L ID+L ++ G A N+L Sbjct: 236 LNTPKILAQTSSEAEVGQKITALLQKLNPSKTKAVLVIDDLQMLLENGNTSNATSLINIL 295 Query: 300 KPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYEL 359 ++ G + V + D YR++IEK + R + V + + L G K + + Sbjct: 296 DAQISEGTVTLVMLLSTDAYRKHIEKHPIVNR-LNVINVEQLEPNILKSALLGHKTQLQA 354 Query: 360 HHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRI 419 H+ + +T+ AI +A +L++RY ++ P +DL+D A+S+R+ + E I Sbjct: 355 HYSLAVTEEAIDSACSLANRYYKEKSQPASTLDLLDSTAASVRLSNKNAQE-------TI 407 Query: 420 IQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAEL 479 QL Q K+ E K R L+ + S + + L+ T + +L Sbjct: 408 TQLTETYQKYCKQPIEEVKDR--DLHLLYHTIFSKISVVLISKIVDNFILTDEDTTQQKL 465 Query: 480 EQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEV 539 E KI + K+L + V+ E+ V Sbjct: 466 E------------------------KIGLILKELAEVSAK-------GMQAVSPLEVEAV 494 Query: 540 LARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIG 599 +A TGIP+ ++ E+++LL +E +L RV GQN+A+ +++AI SR+GL+DP +PIG Sbjct: 495 VAGDTGIPIGKIQAQEKDRLLGIETKLCERVKGQNKAITTLADAIIESRSGLSDPKKPIG 554 Query: 600 SFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEG 659 SF FLGPTG GKTEL K+LA +FD D AM+R DMSEF E+HS + L GAPPGYVGYEEG Sbjct: 555 SFFFLGPTGTGKTELTKSLAELLFDDDSAMIRFDMSEFKEEHSAALLYGAPPGYVGYEEG 614 Query: 660 GYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSN 719 G L +R++PYSV+L DE+EKAH V+++ LQ++D+G++ D GR DF N+++I TSN Sbjct: 615 GLLVTKIRQKPYSVVLFDEIEKAHSSVYDVFLQMMDEGKIHDKLGREGDFSNSIIIFTSN 674 Query: 720 LGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQL 779 +GS I ++ E EL + V+S FRPEF+ R+ E+V F P+ E I +Q Sbjct: 675 IGSQWIAQQIQEGHQPKSNEL-IEVMSKYFRPEFLGRLTEIVPFSPITESVAQEIFMLQF 733 Query: 780 KRLYKR-LEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGEL 838 RL K+ L+++ ++ ++ E + L+E GY P YGARP+ I+ ++ +++ I+S + Sbjct: 734 SRLQKQLLDQKNIQVDLAPETISYLTEKGYSPQYGARPIAGVIRTYLKKTISKLIVSETI 793 Query: 839 VPGKVIRLEVNEDRI 853 G + + +E + Sbjct: 794 KQGDKVCVNYHEGNL 808 >UniRef50_Q64SE5 ATP-dependent Clp protease ATP-binding subunit n=12 Tax=Bacteroidales RepID=Q64SE5_BACFR Length = 812 Score = 536 bits (1380), Expect = e-150, Method: Composition-based stats. Identities = 250/859 (29%), Positives = 433/859 (50%), Gaps = 50/859 (5%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M + AL A+ +AL + HL+ A+ + G + +L+S + G + Sbjct: 1 MNDSNYSPSLVSALKIARGMALQDKHNTFGVSHLVMAMFAENTG-LKEILSSMQKDVGYI 59 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG 120 + + +V+P +++ +VL+ ++ K G + I S A L Sbjct: 60 MEWFDTHREMYRSSGTSTEEVEPDEEVSKVLDESERSKIKLGADSIDSICVFTAILREGV 119 Query: 121 TLA-DILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDP 179 + ++ + +I + + QG E Q A Y +L ++ Sbjct: 120 VYSHQQIEILDVSEDDILSHYNALTPLH--SYQGEEMQITASVPYADNLKKQETINAGGF 177 Query: 180 VIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLA 239 V+GR++E+R ++ L+R +++GE G+GK++I+ + I E E LK ++ Sbjct: 178 VVGREKEVRTILECLERSENKGILIVGESGIGKSSIINAFVKDICENE-DEMLKQISIVG 236 Query: 240 LDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNML 299 L+ L+A E +++ +++ L + E +L ID+L ++ + A N+L Sbjct: 237 LNTAKLLASTSSETEIAQKVVNLMHKLNQLE-QAVLVIDDLQVLLENSVSGKASTLINIL 295 Query: 300 KPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYEL 359 ++ G + V T D YR+ IEK E R + + E + ++ K+R E Sbjct: 296 SAQISEGAANLVLTLTNDSYRKNIEKHPI-EGRLDIIKIEELDTATLESAIQLHKKRIEN 354 Query: 360 HHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRI 419 ++ ++I+D I + LS RY +R LP AIDL+D A+++R Sbjct: 355 YYELRISDACIKDSIALSKRYFKERSLPSAAIDLLDRTAAAVR----------------- 397 Query: 420 IQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAEL 479 L ++ AS L+ EE+ + + SE + ++ S + Sbjct: 398 ---------LCNKNARASVSDLEADFEEIKSLDEKISEGPL-YLLYRSVFSKISVVLTTK 447 Query: 480 EQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEV 539 ++ + ++ G++ + K+L+A + + +R +EI + Sbjct: 448 LSDNYVWDKEDDIA-------IKAGRLSGIIKELKALSDQSIEEIR-------SSEIEAI 493 Query: 540 LARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIG 599 +A T IP+ ++ E+++LL +E +L RV GQN A+ +S+AI SR+GL+DP +PIG Sbjct: 494 VAECTNIPIGKIQAREKDRLLSIESKLQERVKGQNRAITTLSDAIIESRSGLSDPKKPIG 553 Query: 600 SFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEG 659 SF FLGPTG GKTEL K+LA +FD + AM+R DMSEF E+HS + L GAPPGYVGYEEG Sbjct: 554 SFFFLGPTGTGKTELTKSLAELLFDDESAMIRFDMSEFKEEHSAALLYGAPPGYVGYEEG 613 Query: 660 GYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSN 719 G L +R++PYSV+L DE+EKAH V+++ LQ++D+G++ D GR DF N+++I TSN Sbjct: 614 GLLVTQIRQKPYSVVLFDEIEKAHSSVYDVFLQMMDEGKIHDKLGREGDFSNSIIIFTSN 673 Query: 720 LGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQL 779 +GS I E+ +L + V++ FRPEF+ R+ EVV F P+ E I + Sbjct: 674 IGSQWIVEQIQSGHTPDSGKL-IEVMAQYFRPEFLGRLTEVVPFAPIDENVAKQIFNLHF 732 Query: 780 KRLYKR-LEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGEL 838 RL ++ ++++ ++++SDEAL+ L+ GY P YGARP+ I+ I+ +++ I+S ++ Sbjct: 733 GRLQEQLMKQKNIQLNLSDEALQHLANKGYSPKYGARPIAGVIRTYIKKSVSRLIVSEQI 792 Query: 839 VPGKVIRLEVNEDRIVAVQ 857 G I + ++ Q Sbjct: 793 KSGDNIVINYRNGELIWEQ 811 >UniRef50_C9MS36 ClpB protein n=1 Tax=Prevotella veroralis F0319 RepID=C9MS36_9BACT Length = 813 Score = 530 bits (1365), Expect = e-149, Method: Composition-based stats. Identities = 256/856 (29%), Positives = 433/856 (50%), Gaps = 51/856 (5%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M +N A+ A+++A + HL+ A+L ++ G + +L S + Sbjct: 1 MNTQNYSNSLIAAIKLAKAMAHQDKHLSFGVAHLVIAMLTEQTG-LREILNSMQKEVTYI 59 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG 120 VE G++ ++ VL+ ++ K G + + + L V +A+ G Sbjct: 60 SDWFETYREMYVGVEHDAGEIIADHEVETVLDEAERSKIKLGTDSVDA-LCVFSAIVRDG 118 Query: 121 TLA--DILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLD 178 + +++ G T I + E S AE + +Y DL + Sbjct: 119 VVYSHQQIESIGVTEDEIMEYFE---ASTSPLSPVAEMDMGSSIQYVSDLRRAELLEEGK 175 Query: 179 PVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVL 238 +IGR +EIR ++ L+R + +L+G PGVGKT I+ LA + + E + ++ Sbjct: 176 SIIGRSKEIRLILETLERSERQGILLVGAPGVGKTGIIRALAHEMEINQ-DEIINQTSLV 234 Query: 239 ALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNM 298 L+ ++A + E ++L G+L + + + +L ID+L ++ +G A N Sbjct: 235 GLNTSKILAQSGNETEITQKLTGLLQKMNQAKSRGVLVIDDLQLLLESGNPTAATYILNN 294 Query: 299 LKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYE 358 L + G + + ++D +R++IEK + R + V E + L + + Sbjct: 295 LDAQICDGAVTLLMVLSMDAFRKHIEKHSI-ANRLNIINVEELEPNILRSALLKHRTILQ 353 Query: 359 LHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418 ++ + +T+ A ++A LS+RY ++ P +DLID A+S+R+ + +++L + Sbjct: 354 AYYSLPMTEEAFISAYNLSNRYYKEKSQPASTLDLIDSTAASVRLSNKNAAGIVEQLVEQ 413 Query: 419 IIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAE 478 + K D+ S L +L + +K +S T K E Sbjct: 414 YEKYKA------MPVDDVSDFDLHLLYHTIFNK-----------------VSVVLTSKIE 450 Query: 479 LEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAE 538 + + + K+ +L K L + L K + KV+ EI Sbjct: 451 DDFVLTDDDSTQ-------------EKLDKLGKMLNELSVLSQKGI----EKVSSLEIES 493 Query: 539 VLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPI 598 V+A TGIP+ ++ E+++LL +E +LH RV GQ++A+ +S+AI SR+GL+DP +PI Sbjct: 494 VVADDTGIPIGKIQAQEKDRLLGIETKLHERVKGQDKAIRTLSDAIIESRSGLSDPKKPI 553 Query: 599 GSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEE 658 GSF FLGPTG GKTEL K+LA+ +FD D AM+R DMSEF E+HS + L GAPPGYVGYEE Sbjct: 554 GSFFFLGPTGTGKTELTKSLADLLFDDDTAMIRFDMSEFKEEHSAALLYGAPPGYVGYEE 613 Query: 659 GGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTS 718 GG L +R++PYSV+L DE+EKAH V++I LQ++D+G++ D GR DF N+++I TS Sbjct: 614 GGLLVTKIRQKPYSVVLFDEIEKAHSSVYDIFLQIMDEGKVHDKLGREGDFSNSIIIFTS 673 Query: 719 NLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQ 778 N+GS I E+ + EL + V+S FRPEF+ R+ EVV F P+ E I +Q Sbjct: 674 NIGSQWIAEQIQKGHQPTSNEL-IEVMSKYFRPEFLGRLTEVVPFSPITEAVAQQIFLLQ 732 Query: 779 LKRLYKR-LEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGE 837 RL K+ LE++ ++ ++ E + L+ G+ P YGARP+ ++ ++ +++ I+S Sbjct: 733 FSRLQKQLLEQKDIQLDLAPETIAYLTSKGFSPQYGARPIAGVVRTYLKKTISKLIVSEA 792 Query: 838 LVPGKVIRLEVNEDRI 853 + PG I + + Sbjct: 793 IKPGDHIIATYKDGNL 808 >UniRef50_B0MPJ8 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MPJ8_9FIRM Length = 794 Score = 524 bits (1350), Expect = e-147, Method: Composition-based stats. Identities = 253/865 (29%), Positives = 393/865 (45%), Gaps = 88/865 (10%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M + T+K AL A + A+ + ++ H++ L GG +L +G+ + Sbjct: 1 MEFNGFTDKANDALNCALTCAMSMGHTYVGSEHILYGLCGSNGGVAYTVLRQSGVTCNSI 60 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG 120 + IN + + + T D P R+L +A+ G ++ + A + Sbjct: 61 ASRINALIGKGLPTQLTVSDFTPRSR--RILESAVMIARNAGKTAAGTDHILRAIMRDNE 118 Query: 121 TLADI-LKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDP 179 A + L G + + + + AL Y +LT A++GK+DP Sbjct: 119 CYASVFLHEMGISGEAVLDQGADTQKNTPQGKRNGSVLPSALSGYGRNLTMLAQEGKIDP 178 Query: 180 VIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLA 239 GR+ E R I++L RR+KNNP L+GE GVGKTAI EGLA +I G VP+ LK +++ Sbjct: 179 CFGRERETNRVIEILLRRSKNNPCLVGEAGVGKTAIAEGLAMKIAGGNVPDELKTKKIYM 238 Query: 240 LDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNML 299 LD+ +++AGAKYRG+FEERLK V +++ + +GN+I+FIDE+H +VGAG A+GA+DA N+L Sbjct: 239 LDITSMLAGAKYRGDFEERLKRVFDEI-RNDGNIIVFIDEIHNIVGAGAAEGAIDAANIL 297 Query: 300 KPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYEL 359 KP LARGE+ +GATT EY++YIEKD ALERR Q V V EP+ E+T+ IL GL+ RYE Sbjct: 298 KPMLARGEIRLIGATTNAEYKKYIEKDPALERRLQPVTVNEPTEEETVTILNGLRCRYES 357 Query: 360 HHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRI 419 +H V+ITD AI AA LS RYI DR LPDKAIDLIDE ++ IR+ + +L + Sbjct: 358 YHKVKITDEAISAAVGLSVRYINDRFLPDKAIDLIDEGSAKIRLSRSGEDSVGKKLKK-- 415 Query: 420 IQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAEL 479 L E A + L +L ++E+ + A + + + Sbjct: 416 ---------LSDEKIRAINNKDFALALKLREQEKTLCANNGGYTATLTA-DDIADVVTQY 465 Query: 480 EQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEV 539 + LA + + + EK + A + L ++ + + Sbjct: 466 TGIPVRYNGNDTTKWLACLEKTLSENVIGQEKAVRAVANAVRRGRSGLSDEHRPVG-SFI 524 Query: 540 LARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIG 599 TG+ ++ +EL + G +A+ R +++ + Sbjct: 525 FLGTTGVGKTKCC-----------KELAKALFGTEKAL---------IRFDMSEYSEKHS 564 Query: 600 SFLFLG-PTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEE 658 +G P G E L + + S ++V D E L+ + Sbjct: 565 VSKLIGAPAGYVGYEDGGRLTDRVRKSPYSVVLFDEIEKAHPDVFDILLQ-------VLD 617 Query: 659 GGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTS 718 G LT+ GR D + IMT Sbjct: 618 DGRLTD------------------------------SGGRTVDFTNTVI-------IMTG 640 Query: 719 NLGSDLIQERFGELDY------AHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIA 772 N+GS LI + L + + LV G + FRPEF+ R+DEVVVF+ L Sbjct: 641 NIGSALIAKGKSRLGFGIQQRQEEISGLVKGELEKYFRPEFLGRVDEVVVFNELSCAEYK 700 Query: 773 SIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQ 832 I + L L K+ E +G S+ + L GARP+ + I + + N ++ Sbjct: 701 LICEKMLSELSKQCERQGIAFSWSERLSEKLCAEAKSRNEGARPIAKLIDKNVRNMISDG 760 Query: 833 ILSGELVPGKVIRLEVNEDRIVAVQ 857 I+SGE G I ++ +D +V+ Sbjct: 761 IISGEFSTGDGIYADIADDDSYSVR 785 >UniRef50_A5K1F9 ATP-dependent Clp protease, putative n=1 Tax=Plasmodium vivax RepID=A5K1F9_PLAVI Length = 1222 Score = 511 bits (1316), Expect = e-143, Method: Composition-based stats. Identities = 231/785 (29%), Positives = 402/785 (51%), Gaps = 64/785 (8%) Query: 5 RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLN----QEGGSVSPLLTSAGINAGQL 60 + + + L +A A F+ ++ AL+N + L+ I+ L Sbjct: 299 KFSQNCKRVLHNAVLEARRKKKMFVSVTDILIALINMAQESQNCEFLRYLSELNISVNDL 358 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSE---------LF 111 + ++ TG + + LN + GD+ + Sbjct: 359 KRELTGYDEGNCPTPPTGTSHRSNAQRDGDLNANSAEKRGGGDSQSGTPEKRDDNQRMRS 418 Query: 112 VLAALESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTER 171 + L + ++ + + T+ + + +K D+ + Sbjct: 419 LNNRLNNEPPNHHLMNNLNSDYLHQTREFKNYEESSFPPNGKLF-NSAYVKDCLTDMVQA 477 Query: 172 AEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEG 231 A + + GR +EI+R I++L RR K+NP+LIGE GVGKTAI+E L+ I+ +VP Sbjct: 478 AYEKGDEHFFGRKKEIKRIIEILGRRKKSNPLLIGESGVGKTAIIEHLSHLILKDKVPYH 537 Query: 232 LKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADG 291 L+ R+ L++G +VAG KYRGEFEE++K +L+++ K++ N ILFIDE+H +VGAG +G Sbjct: 538 LRNCRIYQLNVGNIVAGTKYRGEFEEKMKHLLSNMNKKKKN-ILFIDEIHVIVGAGSGEG 596 Query: 292 AMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILR 351 ++DA N+LKP L+ L C+G TT EY +YIE D AL RRF V V + ++T+ +L+ Sbjct: 597 SLDASNLLKPFLSSDNLQCIGTTTFQEYTKYIESDKALRRRFNCVPVKPFTGKETLLLLK 656 Query: 352 GLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEE 411 +K YE +H++ T+ A+ + L+ Y+ PDKAID++DEA + +++ + Sbjct: 657 KIKYSYEKYHNIYYTNEALKSIVMLTEDYLPTANFPDKAIDILDEAGAYQKIRYEVFM-- 714 Query: 412 LDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSG 471 ++ L E+ E S+ +E +A+ +G Sbjct: 715 --------------RRRLRGENHERSEWG---------------ERVERGGQAKSGQENG 745 Query: 472 TQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKV 531 Q + K+ +Q GD ++ I + +A + L+ ++ V Sbjct: 746 GQVNGGQANGGKLRSDQP--SGDEHGSAD--QDGIANQDSGGDARSYLQNMHIKY----V 797 Query: 532 TDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGL 591 T I ++++ I + + E EK+++++++L+ +IGQ + +D +S + ++ + Sbjct: 798 TSDVIENIVSKKASISYIKKNKKEEEKIIKLKEKLNKIIIGQEKVIDILSRYLFKAITNI 857 Query: 592 ADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPP 651 DPN+PIG+ L G +GVGKT + ++ ++F+ ++ ++ I+MSE+++KHSVS+L G+ P Sbjct: 858 KDPNKPIGTLLLCGSSGVGKTLCAQVISKYLFN-EDNLIVINMSEYIDKHSVSKLFGSYP 916 Query: 652 GYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRN 711 GYVGY+EGG LTE+V+++P+S+IL DE+EKAH +V ++LLQ+LD+G LTD +G V F+N Sbjct: 917 GYVGYKEGGELTESVKKKPFSIILFDEIEKAHGEVLHVLLQILDNGMLTDSKGNKVSFKN 976 Query: 712 TVVIMTSNLGSDLIQERFG---------ELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 762 T + MT+N+GSD++ + F Y K G + PE +N + V Sbjct: 977 TFIFMTTNVGSDIVTDYFKLYNRNYSNMGFKYYLSKRPNRGEADGSLLPEGVNSVANSVE 1036 Query: 763 FHPLG 767 P G Sbjct: 1037 EDPTG 1041 Score = 102 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 35/128 (27%), Positives = 67/128 (52%), Gaps = 4/128 (3%) Query: 734 YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLE-ERGYE 792 Y ++ + + F PEF+NRIDE ++F ++ + +I Q + L KR++ + Sbjct: 1084 YEELQPEIEEELKKKFLPEFLNRIDEKIIFRQFLKRDVINIFQNMIDDLKKRIKKRKNLN 1143 Query: 793 IHISDEALKLLS---ENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVN 849 + I + +K + N YD +GAR ++RA+ + IE+P+A ++S P I + ++ Sbjct: 1144 LIIEPDVIKYICSDENNIYDMNFGARSIRRALYRYIEDPIASFLISNLCEPNDSIYVSLS 1203 Query: 850 EDRIVAVQ 857 + VQ Sbjct: 1204 SGNKIDVQ 1211 Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 31/79 (39%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 D K AL A+ +A H+ + I HL+ A++ + V +L I+ Sbjct: 61 FDEYDEKCIRALIMAREVAKNHNEKEILLKHLLIAIIRIDSNLVKHILNFCNISLTTFLD 120 Query: 63 DINQALNRLPQVEGTGGDV 81 +N +N+ G + Sbjct: 121 KLNNEMNKTGGETNFGTNR 139 Score = 42.4 bits (98), Expect = 0.069, Method: Composition-based stats. Identities = 22/144 (15%), Positives = 50/144 (34%), Gaps = 12/144 (8%) Query: 69 NRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALE-----SRGTLA 123 + + D++ SQ+ RVL+ A+++ F+S ++A + Sbjct: 286 EKADERADDKADIKFSQNCKRVLHNAVLEARRKKKMFVSVTDILIALINMAQESQNCEFL 345 Query: 124 DILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYT-IDLTERAEQGKLDPVIG 182 L + ++ + + G R ++ ++ ++G D G Sbjct: 346 RYLSELNISVNDLKRELTGYDEGNCPTPPTGTSHRSNAQRDGDLNANSAEKRGGGDSQSG 405 Query: 183 ----RDEEIRRTIQVLQRRTKNNP 202 RD+ + ++ L R N P Sbjct: 406 TPEKRDD--NQRMRSLNNRLNNEP 427 >UniRef50_A8YTL4 ATP-dependent protease n=26 Tax=Lactobacillus RepID=A8YTL4_LACH4 Length = 707 Score = 511 bits (1315), Expect = e-143, Method: Composition-based stats. Identities = 261/746 (34%), Positives = 394/746 (52%), Gaps = 82/746 (10%) Query: 111 FVLAALESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTE 170 + L S D + +G + + Q+ K +DL E Sbjct: 10 TLFNELNSSFFNDDFGRRSGNGNSGSIPINYSSNMSSAPQTIQQNPQQPNEKPIGVDLVE 69 Query: 171 RAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPE 230 A++ DPVIGRDE+I I++L RR KNNPVLIG GVGKT+IVEGLA+RI +G VP Sbjct: 70 EAKKNNFDPVIGRDEQIDNVIEILSRRKKNNPVLIGPAGVGKTSIVEGLAERIASGNVPA 129 Query: 231 GLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKAD 290 + ++++++ +VAG+ RG FEERLK V++ AK + N++LFIDELH +VGAG D Sbjct: 130 KMANMHIISVNINDMVAGSSLRGSFEERLKKVIDK-AKSDPNIVLFIDELHNIVGAGSTD 188 Query: 291 GAM---DAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTI 347 DA N+LKPALA G+L +GATT E FQ++ Sbjct: 189 SENNNGDAANILKPALANGDLKLIGATTTSE--------------FQRIE---------- 224 Query: 348 AILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDS 407 DPA+ R Q+P+ D+ + ++ + + Sbjct: 225 ------------------KDPAL-------SRRFQAVQVPEPTTDVAIKILKGLKKKYED 259 Query: 408 KPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKA 467 D + ++L ++ + L DK + KA Sbjct: 260 YHHVKYSDDSLKLAVELSERYIQGRY--------------LPDKAIDLMDEAGAKKALLV 305 Query: 468 SLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLL 527 + + +K ++ + +A + D + E++ KI ELEKQL+ Sbjct: 306 QPTDEKNLKNQISALEAKKSEAAKAEDYDKAGEIK-TKIAELEKQLKNVDTKNI------ 358 Query: 528 RNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRS 587 +VT+ +I ++ + T IP+S + E +K L + ++L VI Q+ A+D +++AI R Sbjct: 359 -PEVTEKDIYAIIEQKTKIPMSELHADEAQKNLDLAKKLKKNVIDQDRAIDVITDAIAR- 416 Query: 588 RAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLV 647 + D +RP GSFL GPTGVGKTEL K LA +F + + ++R+DMSE+ ++ +V++L+ Sbjct: 417 KQIFKDSDRPTGSFLLTGPTGVGKTELAKQLAIQLFGNKDHLIRLDMSEYQDEMAVNKLI 476 Query: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTV 707 G+ PGYVGY EGG LTE VR +PYS+IL DE+EKA+P VFN LLQ++DDGRLTD QGRTV Sbjct: 477 GSAPGYVGYGEGGQLTEKVRHQPYSLILFDEIEKANPQVFNALLQIMDDGRLTDAQGRTV 536 Query: 708 DFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLG 767 F++T++IMTSN G G++D + + + + FRPEF+NR+D +V F+ L Sbjct: 537 SFKDTILIMTSNAGFSDKLLEDGKVDQDKL----ISALENYFRPEFLNRLDAIVPFNSLT 592 Query: 768 EQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIEN 827 EQ + I I LK++ L ++G + +SDEA L+E GYD +GARPL+R ++Q +E Sbjct: 593 EQDMGKIINIYLKKMSHVLAKKGVTVEVSDEAKNFLAEKGYDKKFGARPLRRVVEQNLET 652 Query: 828 PLAQQILSGELVPGKVIRLEVNEDRI 853 P A+ IL K I ++ + Sbjct: 653 PAAKLILRE--PDTKKIEFTADDKHL 676 >UniRef50_B3LAU4 ATP-dependent Clp protease, putative n=1 Tax=Plasmodium knowlesi strain H RepID=B3LAU4_PLAKH Length = 1243 Score = 507 bits (1306), Expect = e-142, Method: Composition-based stats. Identities = 244/805 (30%), Positives = 417/805 (51%), Gaps = 71/805 (8%) Query: 5 RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLN----QEGGSVSPLLTSAGINAGQL 60 + + + AL +A A F+ ++ AL+N E L+ I+ L Sbjct: 316 KFSENCKRALHNAVLEARRKKKMFVNVTDILIALINMAQENENCEFLKYLSELNISVNDL 375 Query: 61 RTDINQA---------LNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELF 111 + ++ R + D +Q R N A + D+ Sbjct: 376 KRELIGYDEENSFAPPTGRTSHSDQRDDDQSSNQADRREENGSLMEAIENRDDNQRMR-- 433 Query: 112 VLAALESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTER 171 + + + + + N T+ + ++ +K D+ Sbjct: 434 ---NVNNEQSNHNFMNNLNNDYLNQTREFKNYEENSFPSNNKLFGS-SYVKDCLTDMVHA 489 Query: 172 AEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEG 231 A + + GR +EI+R I++L RR K+NP+LIGE GVGKTAIVE L+ I+ +VP Sbjct: 490 AYEKGDEHFFGRKKEIKRIIEILGRRKKSNPLLIGESGVGKTAIVEHLSYLILKDKVPYH 549 Query: 232 LKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADG 291 L+ R+ L++G +VAG KYRGEFEE++K +L+++ K++ N ILFIDE+H +VGAG +G Sbjct: 550 LRNCRIYQLNVGNIVAGTKYRGEFEEKMKHLLSNMNKKKKN-ILFIDEIHVIVGAGSGEG 608 Query: 292 AMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILR 351 ++DA N+LKP L+ L C+G TT EY +YIE D AL RRF V V S ++T+ +L+ Sbjct: 609 SLDASNLLKPFLSSDNLQCIGTTTFQEYTKYIEADKALRRRFNCVPVKPFSAKETLLLLK 668 Query: 352 GLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEE 411 +K YE +H++ T+ A+ + L+ Y+ PDKAID++DEA + +++ + + Sbjct: 669 KIKYNYEKYHNIYYTNDALKSIVMLTEDYLPTANFPDKAIDILDEAGAYQKIKYEMFMRQ 728 Query: 412 LDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSG 471 R +R + E A D+ N L++ E+ S ++ Sbjct: 729 RLRDERG--------RRADAEPRNAESANGDLANGNLTNGEQMISH----------QVNA 770 Query: 472 TQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKV 531 T+T + K+ + + ++ +EA LE M+ V Sbjct: 771 TETSSDDHPPGKLRTDDNQPAFVHE-------------DRNVEAENYLENMHMKY----V 813 Query: 532 TDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGL 591 T I ++++ + I + + E EK+++++++L+ +IGQ + +D +S + ++ + Sbjct: 814 TSDVIENIVSKKSSISYIKKNKKEEEKIIKLKEKLNKIIIGQEKVIDILSRYLFKAITNI 873 Query: 592 ADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPP 651 DPN+PIG+ L G +GVGKT + ++ ++F+ ++ ++ I+MSE+++KHSVS+L G+ P Sbjct: 874 KDPNKPIGTLLLCGSSGVGKTLCAQVISKYLFN-EDNLIVINMSEYIDKHSVSKLFGSYP 932 Query: 652 GYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRN 711 GY+GY+EGG LTE+V+++P+S+IL DE+EKAH +V ++LLQ+LD+G LTD +G V F+N Sbjct: 933 GYIGYKEGGELTESVKKKPFSIILFDEIEKAHSEVLHVLLQILDNGMLTDSKGNKVSFKN 992 Query: 712 TVVIMTSNLGSDLIQERFG--ELDYAHM------------KELVLGVVSHNFRPEFINRI 757 T + MT+N+GSD+I + F +YA++ +E + P+ +N + Sbjct: 993 TFIFMTTNVGSDIITDYFKLYNKNYANLGFKYYLNKKKNKEETDGSSLHKGQLPQGVNSV 1052 Query: 758 DEVVVFHPLG-EQHIASIAQIQLKR 781 VV HP G + A+ QI KR Sbjct: 1053 GNSVVEHPTGLSNNSATDVQINHKR 1077 Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 35/128 (27%), Positives = 68/128 (53%), Gaps = 4/128 (3%) Query: 734 YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLE-ERGYE 792 Y ++ + + F PEF+NRIDE ++F ++ + +I Q ++ L KR++ + Sbjct: 1105 YEELQPEIEEELKKKFLPEFLNRIDEKIIFRQFLKRDVVNIFQNMIEDLKKRIKKRKNLN 1164 Query: 793 IHISDEALKLLS---ENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVN 849 + I + +K + N YD +GAR ++RA+ + IE+P+A ++S P I + ++ Sbjct: 1165 LIIEQDVIKYICSDENNIYDMNFGARSIRRALYKYIEDPIASFLISNLCEPNDSIHVSLS 1224 Query: 850 EDRIVAVQ 857 + VQ Sbjct: 1225 NGNKINVQ 1232 Score = 45.1 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 30/68 (44%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 D K AL A+ +A ++ + I HL+ A++ + V +L I+ Sbjct: 61 FDEYDEKCIRALIMAREVAKNNNEKEILLKHLLIAIIRIDSNLVKHILNFFNISLTTFLE 120 Query: 63 DINQALNR 70 +N+ +N+ Sbjct: 121 KLNKEINK 128 >UniRef50_C4W7H5 ATPase AAA-2 domain protein n=1 Tax=Staphylococcus warneri L37603 RepID=C4W7H5_STAWA Length = 882 Score = 494 bits (1272), Expect = e-138, Method: Composition-based stats. Identities = 233/760 (30%), Positives = 376/760 (49%), Gaps = 95/760 (12%) Query: 116 LESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQG 175 L R L + N + + + + ++ L+ +I++T++A Sbjct: 196 LTDRFQNRGYLANSFYDGKNEKEQQLDLAKQKRITNKLYNPNYSLLEDISINITDKARNE 255 Query: 176 KLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGR 235 ++ PVI R++EI L RR KNN LIG+ GVGK+AIVEGLA +I+N E+P L + Sbjct: 256 EILPVINREKEIHHLEIALSRRDKNNVALIGKGGVGKSAIVEGLALKIVNKEIP-SLINK 314 Query: 236 RVLALDMGALVA---GAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGA 292 ++L M L++ G +RG ++ ++++ K E +VILF+DE+H + GK G Sbjct: 315 KILQFSMNDLISVIQGDTFRG-----IQRFMSEM-KSEKDVILFVDEIHML---GKYKGI 365 Query: 293 MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRG 352 D +LKPA+AR + +GATT E++ YI D AL RRF+ V + EP+VEDTI I+ Sbjct: 366 TD---ILKPAMARNDFRIIGATTPSEWQNYISSDIALTRRFEIVNINEPTVEDTIEIINE 422 Query: 353 LKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEEL 412 YE H V + I A L +Y QLPD A ++D A + R++ Sbjct: 423 AISVYENFHQVNFEEETIELAVKLGKKYFQKEQLPDLAFTILDNAGAICRIE-------- 474 Query: 413 DRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGT 472 + + + DK ++ ++ + + Sbjct: 475 -------------------------RGQFTNIQLNYEDKMNDLKLTLKQAQSIEFNDQQI 509 Query: 473 QTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVT 532 I+ E++Q + E A + + VT Sbjct: 510 DEIRKEIKQL-----------------------------EKEYARNITSSKKMVFPINVT 540 Query: 533 DAEIAEVLARWTGIPV--------SRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAI 584 I + + + G + + + E +L ++ + ++IGQ++A++ ++NA+ Sbjct: 541 KEHIKKAIEQKLGESIDGLEFQGDEQFSDIELNRLRSLKAVMKSQIIGQDDAINTIANAV 600 Query: 585 RRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVS 644 R + G N P+G F+ LG TGVGKTE K L ++ + ++R DMSE+ + H VS Sbjct: 601 IRKKLGFKQHNHPVGVFMLLGTTGVGKTETAKILNRTLYKDESNIIRFDMSEYQKDHEVS 660 Query: 645 RLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQG 704 +L+G PPGYVGY G L + V P +VIL DEVEKAHP +F+ILLQV DD RLT+ G Sbjct: 661 KLIGPPPGYVGYGRDGDLVKTVLEHPNAVILFDEVEKAHPKIFDILLQVFDDARLTNSLG 720 Query: 705 RTVDFRNTVVIMTSNLGSDLI---------QERFGELDYAHMKELVLGVVSHNFRPEFIN 755 +F ++++TSN+G+ I Q+ E D+ + E + +++ FRPEF+N Sbjct: 721 EVANFSECIILLTSNIGTSDIRHKKVIGLNQQNNDETDFVTVDESIKNALNNYFRPEFLN 780 Query: 756 RIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGAR 815 RIDE + F PL +Q I I + L++ +E GY I S A++L+++ Y+P GAR Sbjct: 781 RIDEFITFKPLDQQEIFEITNLLLEKEKTLVESLGYNIEFSSSAMRLIAKLCYEPKNGAR 840 Query: 816 PLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855 P+KR I + +E+ L+ +I++G L G I + +V Sbjct: 841 PIKRGISKLLEDRLSDEIINGTLQKGDNIEVTEANGELVI 880 >UniRef50_Q8IM28 ATP-dependent CLP protease, putative n=6 Tax=cellular organisms RepID=Q8IM28_PLAF7 Length = 1341 Score = 491 bits (1263), Expect = e-137, Method: Composition-based stats. Identities = 222/764 (29%), Positives = 397/764 (51%), Gaps = 39/764 (5%) Query: 2 RLD-RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLN----QEGGSVSPLLTSAGIN 56 D + + +L L +A A F+ + ++ +++N ++ + IN Sbjct: 333 NFDIKFSENCKLVLHNAVLEAKRKRKIFVNIIDILLSIINIAQEKKHYDFLKYIEELNIN 392 Query: 57 AGQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDN-----FISSELF 111 L++ + + + + +N + + L Sbjct: 393 INDLKSLLLSYDEKNYDGNNIYDTNANNTNYNTHNRNIPLNNNNNNNNVSNKGYNNQRLN 452 Query: 112 VLAALESRGTLADILKAAGATTANITQAIEQMRGGESVN----DQGAEDQRQALKKYTID 167 + E + + L + E + + +K ID Sbjct: 453 NMNNNEQANHIINSLNNEYLNNGRDYKYNEDHPFSSNNKFLNPSTSSASSISFMKDCLID 512 Query: 168 LTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGE 227 + A++ D GR +EI+R I++L R+ K+NP+LIGE GVGKTAI+E L+ I+ Sbjct: 513 MVHEAQEKGDDHFFGRKKEIKRIIEILGRKKKSNPLLIGESGVGKTAIIEYLSYLILKDN 572 Query: 228 VPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAG 287 VP LK R+ L++G +VAG KYRGEFEE++K +L+++ K++ N ILFIDE+H +VGAG Sbjct: 573 VPYHLKNCRIFQLNLGNIVAGTKYRGEFEEKMKHLLSNMNKKKKN-ILFIDEIHVIVGAG 631 Query: 288 KADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTI 347 +G++DA N+LKP L+ L C+G TT EY ++IE D AL RRF V + + ++T Sbjct: 632 SGEGSLDASNLLKPFLSSDNLQCIGTTTFQEYSKFIENDKALRRRFNCVTINPFTSKETY 691 Query: 348 AILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDS 407 +L+ +K YE +H++ TD ++ + +L+ Y+ PDKAID++DEA +++ + Sbjct: 692 KLLKKIKYNYEKYHNIYYTDDSLKSIVSLTEDYLPTANFPDKAIDILDEAGVYQKIKYEK 751 Query: 408 KPEELDRLDR-RIIQLKLEQQA--------------------LMKESDEASKKRLDMLNE 446 ++ R +R R I++ + Q + E N Sbjct: 752 FMKQKLRAERLRKIRIHMNTQENNNNNNNNNNNISNNNNDYIISDEDQHIHNNNYGYNNY 811 Query: 447 ELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKI 506 ++ ++++++S E+ K + +T K E++ E + + Sbjct: 812 DVINQQKEFSNDEDINKLNDDDTNLRKTYKQEIDNKIKNDENGNNNIKTDTNGNILINNV 871 Query: 507 PELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQEL 566 L+ T+ + + + VT I ++++ + I + + E EK+L+++++L Sbjct: 872 ESLQNDTYDETRNLIENVHM--KYVTSDVIENIVSKKSSITYIKKNKKEEEKILKLKEKL 929 Query: 567 HHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSD 626 + +IGQ + +D +S + ++ + DPN+PIG+ L G +GVGKT + ++ ++F+ + Sbjct: 930 NKIIIGQEKVIDILSKYLFKAITNIKDPNKPIGTLLLCGSSGVGKTLCAQVISKYLFN-E 988 Query: 627 EAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDV 686 + ++ I+MSE+++KHSVS+L G+ PGYVGY+EGG LTE+V+++P+S+IL DE+EKAH +V Sbjct: 989 DNLIVINMSEYIDKHSVSKLFGSYPGYVGYKEGGELTESVKKKPFSIILFDEIEKAHSEV 1048 Query: 687 FNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFG 730 ++LLQ+LD+G LTD +G V F+NT + MT+N+GSD+I + F Sbjct: 1049 LHVLLQILDNGLLTDSKGNKVSFKNTFIFMTTNVGSDIITDYFK 1092 Score = 96.7 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 4/131 (3%) Query: 731 ELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERG 790 Y +K + + F PEF+NRIDE ++F ++ I +I Q + L KR+++R Sbjct: 1200 NKWYDELKPDIEEELKKKFLPEFLNRIDEKIIFRQFLKRDIINILQNMIDDLKKRIKKRK 1259 Query: 791 YE-IHISDEALKLLS---ENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRL 846 + I + + N YD +GAR ++RA+ + IE+P+A ++S P I + Sbjct: 1260 NINLIIDKNVINYICSDENNIYDMNFGARSIRRALYKYIEDPIAAFLISNIHEPNDSIYV 1319 Query: 847 EVNEDRIVAVQ 857 ++ D+ + VQ Sbjct: 1320 QLTNDKKIKVQ 1330 Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 31/78 (39%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 D K AL A+ +A + I HL+ A++ + V +L + I+ Sbjct: 62 FDEYDEKCIKALIMAREVAKNDNENEILLKHLLIAIIRIDSNLVQNILKNFNISLTNFLD 121 Query: 63 DINQALNRLPQVEGTGGD 80 + A+N++ + + Sbjct: 122 KFHVAINKISKSYTNSNN 139 >UniRef50_B2S3E1 ATP-dependent Clp protease, subunit C n=4 Tax=Treponema RepID=B2S3E1_TREPS Length = 814 Score = 487 bits (1254), Expect = e-136, Method: Composition-based stats. Identities = 263/857 (30%), Positives = 407/857 (47%), Gaps = 63/857 (7%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M D N ++ L Q++A ++P H++ AL+ + G L+ + + Sbjct: 1 MLQDLSANARKVLLELGQTVAREARASLLQPEHILLALIQHKVGRGYKLIEKLIEDVATV 60 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL-ESR 119 R + Q + + D+ S + +L++ A+ +I +E V+A E + Sbjct: 61 RLILEQHVLTNEGDVASPQDLPVSGRVKHLLDIAAMEARSLRCAYIGTEHLVIAFAREEQ 120 Query: 120 GTLADILKAAGATTANITQA-IEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLD 178 L L G + ++ A I ++ + L +Y DLTERA G L+ Sbjct: 121 NPLFQSLIREGLSLDDLRNASIISSPHSDTTRTRLERKVASVLDEYGTDLTERARAGALN 180 Query: 179 PVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVL 238 PVIGR++EI R IQ+L RR KNNPVLIGEPGVGKT+IVEGLA I+ EVP L RV+ Sbjct: 181 PVIGRNKEITRVIQILCRRGKNNPVLIGEPGVGKTSIVEGLAYAIVREEVPHILLHTRVV 240 Query: 239 ALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNM 298 +LD+ A++AG KYRG+FEERLK ++ ++ + E VILFIDELHT++GAG G++DA NM Sbjct: 241 SLDLAAVIAGTKYRGQFEERLKRIIKEVEETE-KVILFIDELHTLIGAGGTQGSLDAANM 299 Query: 299 LKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYE 358 LKPALARG++ C+GATTL EYR+Y EKDAAL RRF+ V V EPS E+T ILR +K YE Sbjct: 300 LKPALARGQIQCIGATTLAEYRRYFEKDAALTRRFRSVLVREPSFEETCTILRKIKSHYE 359 Query: 359 LHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418 HH V A+ LS RYI +R PDKAIDL+DE + R+Q + + L + Sbjct: 360 RHHQVIYQSDALEKIVELSRRYIPERFFPDKAIDLMDEVGAMKRVQQRADTQVLRSFSIK 419 Query: 419 IIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAE 478 + L E + + D A R L+ ++ R+ L+ EW A +A + + Sbjct: 420 VANLTTETERAIALEDWA---RARSLHTDVVQLRRRLHALKVEWSAREALSIFAEDVAQA 476 Query: 479 LEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAE 538 + + +L R + ++ + Q EA L ++R +V Sbjct: 477 VSLMTDIPVHSLEGDELCRFTNIERDLCATVRGQREAIATL---ARAIVRARVG------ 527 Query: 539 VLARWTGIPVSRMMESEREKLLR--MEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNR 596 ++ T P+ + + + + + L + G +A+ + + R + Sbjct: 528 -ISSDTR-PIGSFLFLGPTGVGKTLLAKTLAEFLFGSADALIRIDMSDYMERYNTSR--- 582 Query: 597 PIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGY 656 L P G E L + +++ +D E + L+ Sbjct: 583 -----LMGAPPGYVGFENGGLLTERVRHRPFSVILLDEIEKAHPDVFNVLLQ-------V 630 Query: 657 EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 716 E G L + + H F + ++ T G G V Sbjct: 631 LEEGELQDNL---------------GHTVNFRNTIIIMTSNAGTRGLGENV--------- 666 Query: 717 TSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQ 776 R ++Y ++ L + F PEF+NR+DE VVF PL + + I + Sbjct: 667 -----PGFQTARARNIEYRQLRVQALREIKRIFSPEFLNRVDECVVFAPLERETLQEILE 721 Query: 777 IQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSG 836 +LK+L +RL + + S A E+G+DP GARPL+R +QQ+IEN LA +++ G Sbjct: 722 CELKKLAERLRGKDIVLRYSAAAKAYCLEHGFDPFLGARPLRRVLQQEIENELALRMIHG 781 Query: 837 ELVPGKVIRLEVNEDRI 853 L G + ++ + R+ Sbjct: 782 TLRAGSCVHIDSDGARL 798 >UniRef50_A8I996 ClpB chaperone, Hsp100 family (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8I996_CHLRE Length = 787 Score = 480 bits (1235), Expect = e-133, Method: Composition-based stats. Identities = 252/680 (37%), Positives = 360/680 (52%), Gaps = 40/680 (5%) Query: 146 GESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLI 205 + G AL+++ DLTE A +G LDPVIGR + I RT+Q+L RRTKNNPVL+ Sbjct: 77 STATGAAGRRVPGAALQRFGRDLTEEARRGLLDPVIGRQDVIARTLQILLRRTKNNPVLV 136 Query: 206 GEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLND 265 GEPGVGKTA+VEG+AQ I + P GL G+RV+ALD+ A++AG+ YRGEFEERL+ V+ D Sbjct: 137 GEPGVGKTALVEGIAQLIASAAAPPGLAGKRVVALDVTAVLAGSSYRGEFEERLQAVVAD 196 Query: 266 LAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEK 325 +A GNVILF+DE+H +VGAG A+G +DA N+LKPALARG L C+GATTLDEYR+++E Sbjct: 197 VAAARGNVILFVDEMHMLVGAGGAEGGLDAANILKPALARGTLRCIGATTLDEYRKHVES 256 Query: 326 DAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQ 385 D A RRFQ V V EP + + L+GL RYE HH V T A+ AAA + RY+ +R+ Sbjct: 257 DPAFARRFQSVLVEEPGEAEVVGWLQGLAPRYEQHHGVLFTRAALRAAAGCAKRYVTERR 316 Query: 386 LPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALM-----KESDEASKKR 440 LPD AIDL+DEAA+ + + + RL + + SD + R Sbjct: 317 LPDSAIDLMDEAAAHVAARRCATGAVGCRLRGGRAGRRRGSSSCWSGSEPHRSDPRAAWR 376 Query: 441 LD----MLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLA 496 + + Q++ A+ + + + ++ Sbjct: 377 SNGGAAASAGAAAKGGHQHAGAAAAAAADTGAPAAIVAAGPTHVAHDLTLDDIHEDFTDD 436 Query: 497 RMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESER 556 + + + + A T+ V + + EV AR G+P++ ++ +R Sbjct: 437 DVDGDEDDADINDDDLIATAAVGASGTVDPKALVVDELAVLEVAARAAGLPLAAVLRDQR 496 Query: 557 -EKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGL------------------------ 591 + + L V+GQ EAV AV A++ R GL Sbjct: 497 GAPVSHLRAALEAAVVGQREAVRAVCTAVQLHRLGLAATAAAAAGAGAAAAGGEGWQKWR 556 Query: 592 ADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPP 651 RP+ SFL GP GVGK+ LCKALA +F A++ + E + +VSRLVGA P Sbjct: 557 GQQQRPVASFLLEGPPGVGKSTLCKALATELFHDPAALLVLHGGELASRTAVSRLVGAAP 616 Query: 652 GYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRN 711 GYVG+ GG LTEA+RRRP V+L+ V++AH +V +LL+ + DG + DGQGR RN Sbjct: 617 GYVGFGTGGLLTEALRRRPAGVLLVQGVDRAHFEVQELLLRGVQDGVIRDGQGRATSLRN 676 Query: 712 TVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHI 771 T+V++T++ + G + + VLG PE +D VV F PL Sbjct: 677 TIVVLTASATAG------GNTNDSGSSLGVLGGQHGQLLPELWAGVDRVVRFAPLTAAER 730 Query: 772 ASIAQIQLKRLYKRLEERGY 791 + + Q+ + +L G Sbjct: 731 VEVVRRQVSDMATQLAPAGV 750 >UniRef50_C5WHX6 ATP-dependent endopeptidase clp ATP-binding subunit n=67 Tax=Bacilli RepID=C5WHX6_STRDG Length = 763 Score = 474 bits (1220), Expect = e-132, Method: Composition-based stats. Identities = 249/704 (35%), Positives = 377/704 (53%), Gaps = 75/704 (10%) Query: 151 DQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGV 210 + + L+++ I++T+ A G +DPVIGRD+EI R I++L RRTKNNPVLIGEPGV Sbjct: 110 QTPNQQAKGLLEEFGINVTDIARHGDIDPVIGRDDEITRVIEILNRRTKNNPVLIGEPGV 169 Query: 211 GKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQE 270 GKTA+VEGLAQ+I++G VP L+G++V+ LD+ +LV G RG+FEER++ ++ ++ +++ Sbjct: 170 GKTAVVEGLAQKIVDGTVPHKLQGKQVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRQRK 229 Query: 271 GNVILFIDELHTMVGAGKA-DGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAAL 329 +VILFIDE+H +VGAG A DG MDAGN+LKPALARGEL VGATTL+EYR IEKDAAL Sbjct: 230 -DVILFIDEIHEIVGAGSAGDGNMDAGNILKPALARGELQLVGATTLNEYR-IIEKDAAL 287 Query: 330 ERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDK 389 ERR Q V V EPSVE+TI IL+G++ +YE +HHV+ + AI AAA LS+RYI DR LPDK Sbjct: 288 ERRMQPVKVDEPSVEETITILKGIQPKYEDYHHVKYSPAAIEAAAHLSNRYIQDRFLPDK 347 Query: 390 AIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELS 449 AIDL+DEA S + + ++ + +D+R+I+ + + ++ D Sbjct: 348 AIDLLDEAGSKMNLTLN--FVDPKEIDKRLIEAENLKAQATRDED--------------Y 391 Query: 450 DKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPEL 509 ++ + + ++K +A Q I E+ AI + + + + E + ++ L Sbjct: 392 ERAAYFRDQIAKYKEMQAQKVDEQDIPIITEKTIEAIIEQKTNIPVGDLKEKEQSQLVNL 451 Query: 510 EKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHR 569 L+A + + + + + G P + L + Sbjct: 452 ANDLKAHVIGQDDAVDKIAKAIRRNRVG------LGTPNRPIGSF----LFVGPTGVGKT 501 Query: 570 VIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLG-PTGVGKTELCKALANFMFDSDEA 628 + + A++ +A R +++ +G P G E L + + + Sbjct: 502 ELSKQLAIELFGSADNMIRFDMSEYMEKHAVAKLVGAPPGYVGYEEAGQLTEQVRRNPYS 561 Query: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688 ++ +D EVEKAHPDV + Sbjct: 562 LILLD--------------------------------------------EVEKAHPDVMH 577 Query: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAH-MKELVLGVVSH 747 + LQVLDDGRLTDGQGRTV F++T++IMTSN G+ + G VLG +S+ Sbjct: 578 MFLQVLDDGRLTDGQGRTVSFKDTIIIMTSNAGTGKSEASVGFGAAREGRTSSVLGELSN 637 Query: 748 NFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENG 807 F PEF+NR D ++ F L + ++ I + L+ + KRL G + ++ + + L + G Sbjct: 638 FFSPEFMNRFDGIIEFKALSKDNLLHIVDLMLEDVNKRLSYNGIHLDVTQKVKEKLVDLG 697 Query: 808 YDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNED 851 YDP GARPL+R IQ IE+ + L + N + Sbjct: 698 YDPKMGARPLRRTIQDYIEDAITDYYLEHPTEKDLRAIMTSNSN 741 >UniRef50_C5NWU6 Negative regulator of genetic competence ClpC/MecB n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NWU6_9BACL Length = 871 Score = 473 bits (1217), Expect = e-131, Method: Composition-based stats. Identities = 247/784 (31%), Positives = 400/784 (51%), Gaps = 101/784 (12%) Query: 90 VLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAGATTANI------TQAIEQM 143 +LN + + + I + + + + L + K + + + ++ Sbjct: 155 ILNGISQERETNANQLIYKQYLLTGNIHTEEFLLGVFKNSKFLYKDFSDGKLEREKASKI 214 Query: 144 RGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPV 203 + ++ + + L D+T +A+ G+L VIGRDEEIR+ VL RR KNN + Sbjct: 215 KKESQISVKLSNPDYSLLNDIATDITLKAKNGELMDVIGRDEEIRKVEMVLTRRDKNNVI 274 Query: 204 LIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVL 263 L+G+ GVGK+AIV+G+A RI E+ LKG+++L + L A K G E + + Sbjct: 275 LLGDGGVGKSAIVDGIAMRIAKNEI-VSLKGKKILQFSLNDLKA--KIGGVTSEGIIKFI 331 Query: 264 NDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYI 323 ++ K+E +VILFIDE+H + G+ MDA KP +ARG+ +GATT E++ YI Sbjct: 332 EEM-KREKDVILFIDEIHML---GRVKHIMDA---FKPLMARGDFRIIGATTPMEWKLYI 384 Query: 324 EKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIAD 383 D AL RRF+KV V EPS+E+TI I++ + YE H V + L+ R Sbjct: 385 SSDTALVRRFEKVIVDEPSIEETINIVKNVSSVYENFHRVNFEENT----IELAVR---- 436 Query: 384 RQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDM 443 L ++ L E S + Sbjct: 437 ----------------------------------------LAKKYLKGEKLPDSAFTVID 456 Query: 444 LNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQY 503 L+ E + + + E+ + K +++A + E Sbjct: 457 NAGALARIEA------------NQDIVMIRDYRNEVNKLKKQLKEAESI-------EYNE 497 Query: 504 GKIPELEKQLE-AATQLEGKTMRLLRN----KVTDAEIAEVLARWTGIPV--------SR 550 + ++ K+LE + + L N K+T +I + + + G+ + Sbjct: 498 AAVDDIRKRLELKVRDFQKERNNLTFNNYEFKITKEDIKKAVEQKAGVKIREKDLKVGKD 557 Query: 551 MMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVG 610 E E +L ++ L +VIGQ EA + ++ A+ RS+ G +P RPIG FLFLG +GVG Sbjct: 558 ADEEELSRLSNLKSILATKVIGQMEATNTIAEAVIRSKTGFRNPKRPIGVFLFLGTSGVG 617 Query: 611 KTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRP 670 KTE K L+ + S + ++R+DMSE+ ++H V++L+GAPPGYVG+ GG LT AV+ P Sbjct: 618 KTETAKVLSEELTGSVDDLIRLDMSEYQQEHEVAKLIGAPPGYVGFRSGGILTRAVKNNP 677 Query: 671 YSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQER-- 728 SV+LLDE+EKAHP +++++LQV DDG LTDG G VDF NT++I+TSNLGS+LI+E Sbjct: 678 KSVVLLDEIEKAHPRIYDLMLQVFDDGILTDGMGERVDFSNTIIILTSNLGSNLIREEKK 737 Query: 729 --FGELDYAH-MKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR 785 F + ++E + +++ FRPE +NRIDE+V F E+ I I + L++ + Sbjct: 738 VGFAKYGMEQIIQEKTMRAINNFFRPELLNRIDEIVTFKSFTEESIFKITSLLLEKEVEI 797 Query: 786 LEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIR 845 ++E GYE+ + EA++ L + YD GAR ++R I + IE PL++ I++ + G + Sbjct: 798 VKESGYELKFTKEAVRFLVKTTYDSEKGARAIRRGITKLIETPLSELIINNCINKGDKVV 857 Query: 846 LEVN 849 ++ + Sbjct: 858 VDSD 861 >UniRef50_C7HWH6 Negative regulator of genetic competence MecB/clpC n=3 Tax=Clostridiales Family XI. Incertae Sedis RepID=C7HWH6_9FIRM Length = 803 Score = 471 bits (1212), Expect = e-131, Method: Composition-based stats. Identities = 250/850 (29%), Positives = 422/850 (49%), Gaps = 68/850 (8%) Query: 7 TNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQ 66 NK A+ + + +I HL+ AL+ G + L AG N LR+ + Sbjct: 3 NNKLNRLTGQARRESYSLSHDYIGVEHLLLALMK-TGSLATKALEEAGANYELLRSIVIN 61 Query: 67 ALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADIL 126 + + V + S + ++ + AQKR S E +LA L + +++ Sbjct: 62 NIGKGSAVRPAK---EYSNKVRQIFDRARLFAQKRKKVSASEEDILLAILNDDDSFTNLM 118 Query: 127 KAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEE 186 I + E + + + + LKK+ +L E AE GK+DPVIGR++E Sbjct: 119 FMLSGLDKKIIRDNLIRLQNEEKSSNTSNNLSENLKKFAKNLNEMAEAGKIDPVIGREDE 178 Query: 187 IRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALV 246 + R IQ+L RRTKNNP+LIG+PGVGKTAI+EGLAQRI++G+VP +K + +++LD+ +++ Sbjct: 179 VERVIQILLRRTKNNPILIGDPGVGKTAIIEGLAQRIVDGKVPFVMKEKTIVSLDLASMI 238 Query: 247 AGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARG 306 AG KYRG+FE+RLK + +L ++E +V+LFIDE H ++GAG ++G+MDA N+LKP LA+G Sbjct: 239 AGTKYRGDFEDRLKKLFGELEQRE-DVVLFIDEFHMVLGAGASEGSMDAANILKPILAKG 297 Query: 307 ELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQIT 366 ++ +GATT+DEYR+++EKD AL RR Q V V EP+ +DTI I+ GLK++YE HH V+IT Sbjct: 298 DIQIIGATTIDEYRKHVEKDQALTRRMQPVHVEEPNKDDTIKIIEGLKDKYEDHHKVEIT 357 Query: 367 DPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQ 426 AI AA LS RYI DR LPDKAID+IDEA S R++ + ++ + L E+ Sbjct: 358 GEAIKAAVDLSQRYIQDRFLPDKAIDVIDEACSKERIKNYKENKDQVSNKEILDGLIEEK 417 Query: 427 -QALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIA 485 QA+ +++ E + D +NE E++ E + + K ++ + +++ K+ Sbjct: 418 NQAINEQNFEKAASLRDQINEAREKLEKEKEEKKTDLKISFDEVAKIVSSWSKVPITKLT 477 Query: 486 IEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTG 545 ++ ++ DL + + + ++ A + ++ + + + TG Sbjct: 478 EDEKQKYMDLDIDLKKEVIGQDKAIDKISHAIKRARVGLKDPKKPIGS----FIFVGPTG 533 Query: 546 IPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLG 605 + + + + L + G + R +++ +G Sbjct: 534 VGKT-----------YLAKSLAKNLFG---------DMDNLIRMDMSEYMEKFAVSRLVG 573 Query: 606 -PTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTE 664 P G E L + +++ D E + L+ + G LT+ Sbjct: 574 SPPGYVGYEEGGQLTEAVRKHPYSVILFDEIEKAHPDIFNLLLQ-------ILDDGRLTD 626 Query: 665 AVRRRPYSVILLDEVEKAHPDVFNILLQVLDD-GRLTDGQGRTVDFRNTVVIMTSNLGSD 723 R D N ++ + + G + Q + F G+ Sbjct: 627 GQGR--------------TVDFKNTIIIMTSNVGVSSLNQNPKIGF-----------GTG 661 Query: 724 LIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLY 783 +++ + + + + + + F +NR+D++++F+ L + I I +I L Sbjct: 662 DVEKEIDDSNKEIINKAIKNAFAPEF----LNRLDDIIMFNSLDKNAIKEITKILLDETK 717 Query: 784 KRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKV 843 +RL+ G EI+ + + LLSE G+ YGARPL+R I +I+N LA++IL G+L Sbjct: 718 ERLKNLGIEINYNKRVVDLLSEGGFSKEYGARPLERHITNKIDNQLAEEILEGKLSKDMK 777 Query: 844 IRLEVNEDRI 853 I L V E +I Sbjct: 778 INLTVKEGKI 787 >UniRef50_Q8KA87 Probable chaperone protein clpB 2 n=15 Tax=cellular organisms RepID=CLPB2_CHLTE Length = 442 Score = 467 bits (1202), Expect = e-130, Method: Composition-based stats. Identities = 236/433 (54%), Positives = 312/433 (72%), Gaps = 1/433 (0%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 ++ T K Q AL A LA NQ IEP HL+S +L + L Sbjct: 3 FDPNKFTVKAQEALQAASMLASSKQNQQIEPEHLLSVMLGDHDNIACQIARKLETPVDTL 62 Query: 61 RTDINQALNRLPQVEGTGGDVQP-SQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESR 119 + +++ ++R+P+V G Q S DL +V + K A++ D +ISSE +A E+ Sbjct: 63 LSVVDREIDRIPKVTGASATGQYISSDLGKVFDTALKEAEQLKDEYISSEHLFIAMSEAG 122 Query: 120 GTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDP 179 ++ +LK AG I + + RG + V Q AE+ Q+LKKY+ +L + +GKLDP Sbjct: 123 VKVSKLLKDAGIDRNAILKVLTSFRGSQRVTSQNAEESYQSLKKYSRNLNDLVIKGKLDP 182 Query: 180 VIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLA 239 VIGRD+EIRR +Q+L RRTKNNPVLIGEPGVGKTAIVEG+AQRI+ G+VPE LK +++ A Sbjct: 183 VIGRDDEIRRVLQILSRRTKNNPVLIGEPGVGKTAIVEGIAQRIVGGDVPENLKSKQIAA 242 Query: 240 LDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNML 299 LD+ ALVAG K+RGEFEERLK ++ ++ +G VILFIDELH +VGAG A+G+MDA N+L Sbjct: 243 LDIAALVAGTKFRGEFEERLKALVKEVQASDGEVILFIDELHLLVGAGSAEGSMDAANIL 302 Query: 300 KPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYEL 359 KPALARGEL C+GATTLDEYR++IEKDAALERRFQ V V +PSVEDT++ILRGLKE+YE+ Sbjct: 303 KPALARGELRCIGATTLDEYRKHIEKDAALERRFQTVIVDQPSVEDTVSILRGLKEKYEI 362 Query: 360 HHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRI 419 HH V+I D A+VAAA LS+RYIADR LPDKAIDLIDEA S +R++IDS+PEELDR++R + Sbjct: 363 HHGVRIKDAALVAAAELSNRYIADRFLPDKAIDLIDEACSRLRLEIDSEPEELDRINREL 422 Query: 420 IQLKLEQQALMKE 432 +L++E++AL +E Sbjct: 423 RRLEIEREALKRE 435 >UniRef50_B6AFU4 Chaperone clpB family protein n=1 Tax=Cryptosporidium muris RN66 RepID=B6AFU4_9CRYT Length = 1270 Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats. Identities = 243/882 (27%), Positives = 407/882 (46%), Gaps = 121/882 (13%) Query: 79 GDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAGATTANITQ 138 ++ +V + + K + + +L E T L+ T Sbjct: 353 ENLSEGTPVVNLFDYILKFISSYNITYYNVFDNLLNKHEEIYTFEKRLENHLNNTEVNKV 412 Query: 139 AIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRT 198 + S + + + +DLT+ A +GK+ P++GR E+ +VL R Sbjct: 413 HEVPSKSFISRLYDLDTKEHSKVSRNIVDLTDLASKGKIKPLVGRLNEMALIERVLSREG 472 Query: 199 KNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEER 258 K++ +LIG PG GKT + E LAQRII+G V L G +V ++D+ +++G+ +RGEFE + Sbjct: 473 KSSVMLIGPPGTGKTTLAEALAQRIIDGTVTSFLLGYKVFSVDISNILSGSTFRGEFEAK 532 Query: 259 LKGVLNDLAKQEGNVILFIDELHTMVGAGKAD--GAMDAGNMLKPALARGELHCVGATTL 316 L +L + VILF DE+H ++G+G++ GAMD N+LK AL +GE+ +GATT Sbjct: 533 LHDILKLVNGHNQKVILFFDEMHLIIGSGRSSNGGAMDGANILKSALGKGEVKIIGATTD 592 Query: 317 DEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATL 376 +EY YI+ D A RRF+ + + EPS+++T +L GL+ +E + V D AI A L Sbjct: 593 EEYFMYIKGDKAFARRFENIHLVEPSIDETKYLLLGLRSDFENTYGVFFCDDAIEYAVFL 652 Query: 377 SHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEA 436 S +YI D PDKA+DL++ AAS +R S + + +++ +++L + Sbjct: 653 SDKYIGDNNQPDKALDLLNSAASMVRSDSYSSSNVTNLANILKEEIQQIERSLKLYTANV 712 Query: 437 SKKRLDMLNEELSDKERQYSELEEEWKAEKASL----SGTQTIKAEL------------- 479 + EL +K+R K ++L + ++ L Sbjct: 713 DDLKSITFENELRNKQRVLKLKYNRLKILMSNLILYIQQYRYLRNNLALFNLAYNLYPMQ 772 Query: 480 -------------EQAKIAIE---QARRVGDLARMSELQYGKIPELE------------- 510 E+A + + ++ ++ ++E+ K EL Sbjct: 773 KYCPVSNISTKMHEKATFSEDFIPNFKKDLNIGELNEMDQEKFLELIKDNFNGEFNAHLD 832 Query: 511 -KQLEAATQLEGKTMRLLRNKVTDAE---IAEVLARWTGIP-----------------VS 549 K E + + + +LR + I ++ ++G+P VS Sbjct: 833 MKDEENSECITTEHPIILRRTRNIDDLRKIIRKISIYSGLPITPTNIGEVDASHIAYVVS 892 Query: 550 RMMESEREKLL-------------RMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNR 596 + E E+L+ + L VIGQN+A + +SN + R++ GL NR Sbjct: 893 QRTEIPMERLIIEIGYDTLINTAVNFTEILSKFVIGQNDAKEMISNILIRAQVGLIPSNR 952 Query: 597 PIGSFLFLGPTGVGKTELCKALANFMF--------------DSDEAMVRIDMSEFMEKHS 642 P GSFLF+GPTGVGKTE+ KA+A + + +++ DMSEF S Sbjct: 953 PSGSFLFIGPTGVGKTEMAKAVAATIHSIKGKQEGFFTTTKSIELPLIKFDMSEFSYSGS 1012 Query: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702 V RL+G G L +AV +RP+SVIL DE+EKAHP VF + LQ+L +G+L+ Sbjct: 1013 VLRLIGEG------NFNGELIKAVNKRPFSVILFDELEKAHPSVFALFLQILSEGKLSGP 1066 Query: 703 QGRTVDFRNTVVIMTSNLGSDLIQERFG----------------ELDYAHMKELVLGVVS 746 G + DF ++I TSN+G+ I ER+ + D + ++ ++ Sbjct: 1067 LG-SADFTKAIIIATSNVGAQQIIERYTRNKNTKNSTSNNLYTVDDDAETIPTELMHTLT 1125 Query: 747 HNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE--ALKLLS 804 F E INR D +V F PL I I + L ++++ ++ L + Sbjct: 1126 KTFSYELINRFDALVTFRPLERVEIIHIIKNCFTDLVHQIKKSRQVEFVTPSNLLLLYIM 1185 Query: 805 ENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRL 846 E Y+ ++GARP+ + I+ +I P+A + + ++ G I + Sbjct: 1186 EKSYNDMFGARPVCKYIEDKILTPIAILLQNRQIESGDKIEV 1227 >UniRef50_Q93ZM4 AT3g48870/T21J18_140 n=31 Tax=cellular organisms RepID=Q93ZM4_ARATH Length = 558 Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats. Identities = 202/438 (46%), Positives = 285/438 (65%), Gaps = 10/438 (2%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 +R T K + +Q A + F+ ++ L+ + G + +L S GIN R Sbjct: 114 MFERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDSR 173 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG- 120 ++ + + R ++ + RVL L + A++ G N+I SE +L L Sbjct: 174 VEVEKIIGRGSGFVAV--EIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEG 231 Query: 121 TLADILKAAGATTANITQAIEQMRGGESV------NDQGAEDQRQALKKYTIDLTERAEQ 174 A +L+ GA +NI + +M G + + L++Y +LT+ AE+ Sbjct: 232 VAARVLENLGADPSNIRTQVIRMVGENNEVTASVGGGSSGNSKMPTLEEYGTNLTKLAEE 291 Query: 175 GKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKG 234 GKLDPV+GR +I R +Q+L RRTKNNP LIGEPGVGKTAI EGLAQRI +G+VPE ++G Sbjct: 292 GKLDPVVGRQPQIERVVQILARRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPETIEG 351 Query: 235 RRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMD 294 + V+ LDMG LVAG KYRGEFEERLK ++ ++ + + +ILFIDE+HT++GAG A+GA+D Sbjct: 352 KTVITLDMGLLVAGTKYRGEFEERLKKLMEEIRQSD-EIILFIDEVHTLIGAGAAEGAID 410 Query: 295 AGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLK 354 A N+LKPALARGEL C+GATT+DEYR++IEKD ALERRFQ V V EP+VE I IL+GL+ Sbjct: 411 AANILKPALARGELQCIGATTIDEYRKHIEKDPALERRFQPVKVPEPTVEGAIQILQGLR 470 Query: 355 ERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDR 414 ERYE+HH ++ TD A+VAAA LSH+YI+DR LPDKAIDLIDEA S +R++ PEE Sbjct: 471 ERYEIHHKLRYTDEALVAAAQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARE 530 Query: 415 LDRRIIQLKLEQQALMKE 432 L++++ Q+ E+ +++ Sbjct: 531 LEKQLRQITKEKNEAVRK 548 >UniRef50_C5YMW4 Putative uncharacterized protein Sb07g002440 n=1 Tax=Sorghum bicolor RepID=C5YMW4_SORBI Length = 818 Score = 451 bits (1161), Expect = e-125, Method: Composition-based stats. Identities = 269/783 (34%), Positives = 385/783 (49%), Gaps = 155/783 (19%) Query: 82 QPSQDLVRVLNLCDKLAQKRG-DNFISSELFVLAALESRGTLADILKAAGATTANITQAI 140 S ++ + L + Q + IS ++ RG+ LK + Sbjct: 178 SFSGEVKNIFALAQEETQHLALKSGISQVFQIINGRVRRGSSESPLKTRSNDDS------ 231 Query: 141 EQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKN 200 + R ++ + + L +Y DLT A +GKLDPVIGR ++I + +Q+L R+ KN Sbjct: 232 LEKRSSKTCAETKNKISTPTLDEYGTDLTTLANKGKLDPVIGRQKQIDQVVQILSRKGKN 291 Query: 201 NPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLK 260 NP LIGEPGVGKTA+VE LAQ I G+VPE ++G++ Sbjct: 292 NPCLIGEPGVGKTAVVESLAQLIAMGDVPETMQGKKFT---------------------- 329 Query: 261 GVLNDLAKQEGNVILFIDELHTMVGAGKA-DGAMDAGNMLKPALARGELHCVGATTLDEY 319 LHT+VGAG A +GA+DA N+LKPALARGEL C+GATT D Y Sbjct: 330 -------------------LHTLVGAGAAVEGAIDAANILKPALARGELQCIGATTTDGY 370 Query: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379 ++IEKD ALERR V++ +P + A Sbjct: 371 MKHIEKDPALERR---------------------------FRQVKVPEPMVEEA------ 397 Query: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439 I+++ +++ +AL ++ + K Sbjct: 398 -----------IEILKGLRERYETHH---------------KVQYADEALSAAAELSHKY 431 Query: 440 RLDM-LNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARM 498 D L ++ D + L A+ Q E+++ R+ + + Sbjct: 432 ISDRFLPDKAIDLIDEAGSLVRLRHAQPKLPKELQDFVTEIKKITKEKCDTIRIENFKKA 491 Query: 499 SELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 558 EL+ ++ EL+ QL Q+ Sbjct: 492 KELRDREL-ELKSQLTTTLQIGNDED---------------------------------- 516 Query: 559 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 618 LH R+IGQ+EAV AVS AIRR+R GL+DP RPI SF+F GPTGVGK+EL KA+ Sbjct: 517 ----GGGLHRRIIGQDEAVTAVSRAIRRARVGLSDPRRPIASFVFAGPTGVGKSELAKAV 572 Query: 619 ANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPP-GYVGYEEGGYLTEAVRRRPYSVILLD 677 A + + S++AMVR+DMSE MEKH+V+RLVGAPP E GG LTEAVRRRP+S++LLD Sbjct: 573 AAYYYGSEDAMVRLDMSELMEKHAVARLVGAPPGYVGHGEGGGQLTEAVRRRPHSLVLLD 632 Query: 678 EVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHM 737 EV+KAHP+V ++LLQVLDDGRLTDG GRTVDFRNT++IMTSN+G G + Sbjct: 633 EVDKAHPEVMDVLLQVLDDGRLTDGMGRTVDFRNTLIIMTSNIGGGNGGSGDGSRSSSK- 691 Query: 738 KELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERG---YEIH 794 E+V + FRPEF+NR+DE +VF PL IA + + + R+ E+ Sbjct: 692 -EVVEEEMKRYFRPEFLNRLDETIVFRPLTRVDGKEIAAVLVSDVAARVSRETMMVVELR 750 Query: 795 ISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVP-GKVIRLEVNEDRI 853 +++ + L+ E G+DP YGAR L+RA+ +E+ LA ++L GE+V G + ++ + Sbjct: 751 VTERFMDLVVEEGFDPWYGARALRRAVVMLLEDTLADKLLDGEIVKAGDTVIVDADAAGN 810 Query: 854 VAV 856 V V Sbjct: 811 VVV 813 >UniRef50_UPI000194EB59 PREDICTED: hypothetical protein, partial n=1 Tax=Taeniopygia guttata RepID=UPI000194EB59 Length = 480 Score = 451 bits (1159), Expect = e-125, Method: Composition-based stats. Identities = 230/480 (47%), Positives = 330/480 (68%), Gaps = 15/480 (3%) Query: 387 PDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNE 446 PDKAID++DE S +RM++ S R++RRI Q ++E++A+ +E D ++ + Sbjct: 2 PDKAIDIVDELRSKLRMRLISAAG-SRRINRRIAQKEIEREAIKREGDTE---KVKEIER 57 Query: 447 ELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKI 506 +L+ + E +WKAEK + Q K ++EQ ++A R GD A+++E++Y K+ Sbjct: 58 DLAAMREEEKEYTAKWKAEKDLIDRIQQNKIDIEQLNFEADRAEREGDYAKVAEIRYSKV 117 Query: 507 PELEKQ---LEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRME 563 EK+ ++ ++ L++ +V +IA+V++RWTGIPV++M++SE+EKLL +E Sbjct: 118 QAKEKENAEIQEQLKIMQGEKALIKEEVDAEDIADVVSRWTGIPVNKMVQSEKEKLLHLE 177 Query: 564 QELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMF 623 ELH RV+GQ +A+ A+++A+RRSRAGL DP RPIGSF+FLG TGVGKTEL KALA ++F Sbjct: 178 AELHQRVVGQEDAIRAIADAVRRSRAGLNDPRRPIGSFIFLGTTGVGKTELAKALAEYLF 237 Query: 624 DSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAH 683 D + M RIDMSE+ EKHSVSRLVGAPPGYVGYEEGG LTE+VRR+PY V+L DE+EKAH Sbjct: 238 DDENMMTRIDMSEYQEKHSVSRLVGAPPGYVGYEEGGQLTESVRRKPYQVVLFDEIEKAH 297 Query: 684 PDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDY-------AH 736 PD FNILLQVLDDGRLTD +GR V+F+NT++IMTSN+GS LI+E F +L Sbjct: 298 PDTFNILLQVLDDGRLTDNKGRNVNFKNTIIIMTSNMGSQLIRENFSKLTPQNKPKVVEE 357 Query: 737 MKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHI 795 K VL ++ N RPEF+NRIDE+++F PL I I +QL + + + G E+ I Sbjct: 358 TKAQVLEMLKENIRPEFLNRIDEIIMFTPLNRTEIEEIVGLQLHSIQRMLQKSSGIELKI 417 Query: 796 SDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855 + +AL L++ GYDP +GARP+KRAI + + N L++ IL+ ++ I ++V D +V Sbjct: 418 TPKALSYLADEGYDPEFGARPVKRAIHRLVLNQLSKDILAQKVDRSHPITIDVENDDLVF 477 >UniRef50_B3EPU4 ATPase AAA-2 domain protein n=4 Tax=Chlorobiaceae RepID=B3EPU4_CHLPB Length = 440 Score = 441 bits (1133), Expect = e-122, Method: Composition-based stats. Identities = 204/432 (47%), Positives = 306/432 (70%), Gaps = 11/432 (2%) Query: 437 SKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLA 496 +++RL+ + ++L+D + ++ W AEK + ++++K++LE + E+ R GD Sbjct: 6 TRQRLEDIEKQLADLNEEQRRIQARWDAEKGLVQESRSLKSKLEDLRHQAEEYERSGDYG 65 Query: 497 RMSELQYGKIPELEKQLEA----ATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMM 552 +++E++Y I ++EKQ+E + + +++ ++ +IA+++++WTGIPVS+M+ Sbjct: 66 KVAEIRYSSIADIEKQIEENKLKIEEKQASGELIMKEEIDAGDIADIVSKWTGIPVSKML 125 Query: 553 ESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKT 612 +SER+KLL ++QELH RVIGQ++AV AVS A++RSRAG+ D RPIGSF+FLGPTGVGKT Sbjct: 126 QSERQKLLLIDQELHKRVIGQDKAVQAVSEAVKRSRAGMGDEKRPIGSFIFLGPTGVGKT 185 Query: 613 ELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYS 672 EL + LA ++FD ++AM+RIDMSE+ME HSVSRLVGAPPGY+GYEEGG LTEAVRRRP+S Sbjct: 186 ELARTLAEYLFDDEDAMIRIDMSEYMESHSVSRLVGAPPGYIGYEEGGQLTEAVRRRPFS 245 Query: 673 VILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGEL 732 V+LLDE+EKAHPDVFNILLQ+LDDGRLTD +G TV+F+NT++IMTSN+G+ LIQ ++ Sbjct: 246 VVLLDEIEKAHPDVFNILLQILDDGRLTDSKGHTVNFKNTIIIMTSNIGAQLIQSEMEKM 305 Query: 733 D-------YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR 785 D +++ + ++ +PEF+NRIDEV++F PL + + I IQ + K Sbjct: 306 DGENRDAVLETLQDKLFLLLKQQVKPEFLNRIDEVILFTPLTRKDLEKIVTIQFNSINKL 365 Query: 786 LEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIR 845 + +H+ D AL LS G+DP +GARPLKR +Q+ I N L++ IL G + G ++ Sbjct: 366 ALRQNISLHLDDSALTWLSNAGFDPAFGARPLKRVMQRSITNKLSEMILEGTVREGDSVQ 425 Query: 846 LEVNEDRIVAVQ 857 + V + V+ Sbjct: 426 VTVEHGELSLVK 437 >UniRef50_B3QUJ2 ATPase AAA-2 domain protein n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QUJ2_CHLT3 Length = 443 Score = 437 bits (1124), Expect = e-121, Method: Composition-based stats. Identities = 209/429 (48%), Positives = 310/429 (72%), Gaps = 11/429 (2%) Query: 438 KKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLAR 497 + RL ++++L++ + ++ +W+++K + + +K+++E+AK+ E+ R G+ + Sbjct: 12 ETRLAEIDQQLANLREEQERIQAKWQSQKELIMSIRKLKSDIEEAKVQAEEFERQGNYGK 71 Query: 498 MSELQYGKIPELEKQLEAATQ----LEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 553 ++EL+YGKI +LEK+LE + L L++ + +IA+V+++WTGIPVS+M++ Sbjct: 72 VAELRYGKITQLEKELEQGKKKVEALRASGNMLMKEDIESKDIADVVSKWTGIPVSKMLQ 131 Query: 554 SEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613 SER+K+L +E EL RVIGQ EA+ AVS A++R+RAGL+D RPIGSF+FLG TGVGKTE Sbjct: 132 SERQKILNIEDELRKRVIGQREAIHAVSEAVKRARAGLSDEKRPIGSFIFLGTTGVGKTE 191 Query: 614 LCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673 L ++LA ++F+ ++AMVRIDMSE+ME +VSRLVGAPPGYVGYEEGG LTEAVRR+P+SV Sbjct: 192 LARSLAAYLFNDEDAMVRIDMSEYMEAFNVSRLVGAPPGYVGYEEGGQLTEAVRRKPFSV 251 Query: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733 +LLDE+EKAHPDVFNILLQVLDDGRLTD +G TV+FRNT++IMTSNLGS LIQE +L Sbjct: 252 VLLDEIEKAHPDVFNILLQVLDDGRLTDNKGHTVNFRNTIIIMTSNLGSHLIQEEMAKLT 311 Query: 734 YA-------HMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRL 786 ++ + ++ + RPEF+NR+DE ++F PL + + I IQ +R+ + Sbjct: 312 DENKETILPELRAKLFDLMRKSLRPEFLNRVDETILFTPLTREDLKQIVDIQFERIRQTA 371 Query: 787 EERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRL 846 +++ + I+DEA L + GYDP +GARPLKR +Q+ I N LA++IL GE+ G I + Sbjct: 372 QKQNILLRITDEAKNWLGQLGYDPHFGARPLKRVMQRYITNELAEKILGGEVSDGDSIEI 431 Query: 847 EVNEDRIVA 855 + +++V Sbjct: 432 VLENNQLVF 440 >UniRef50_A4W448 ATPases with chaperone activity, ATP-binding subunit n=73 Tax=Streptococcus RepID=A4W448_STRS2 Length = 817 Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats. Identities = 255/874 (29%), Positives = 398/874 (45%), Gaps = 91/874 (10%) Query: 5 RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDI 64 +++ Q DAQ +A + + ++E HL+ A + +L + + Sbjct: 2 KISRGLQGVYEDAQLIAQRYSSDYLETWHLLLAFVINPDTVAGAILAEYPADVLDYERAV 61 Query: 65 NQALNRLPQVEGTGGDVQPSQDLVRVLN-LCDKLAQKRGDNFISSELFVLA-ALESRGTL 122 + R E PS V+ L +K+A+ + +E + L+ R T Sbjct: 62 YMVMGRRYHEELESFFFLPSSKRVKELQVFAEKIAEIVKSKGLGTEHIFMGMLLDKRSTA 121 Query: 123 ADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIG 182 + IL G + ++D+ + L + L+ G Sbjct: 122 SQILDQVGFHFED------------------SDDKVRFLD----------LRKNLEAKAG 153 Query: 183 RDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDM 242 +E + I+ + + K +G +G T G G D+ Sbjct: 154 FTKEHLKAIRTMTKGGKPKQATVGNM-MGMTQSQSG---------------GLEDYTRDL 197 Query: 243 GALV-AGA--KYRGEFEE--RLKGVLNDLAKQEGNVILFIDELHTMVGAGKA----DGAM 293 AL +G G EE R+ +L+ K ++ T + G A +G + Sbjct: 198 TALARSGQLEPVIGRDEEISRMLQILSRKTKNNPVLVGDAGVGKTALALGLAQRIANGEV 257 Query: 294 DAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGL 353 A + L ++ + T E R + I + L Sbjct: 258 PASLVNMRILELDLMNVIAGTRFR---------GDFEERMNNIINDIEEDGRVILFIDEL 308 Query: 354 KERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELD 413 + D + AA L P + + ++ + + E+ Sbjct: 309 HTIMGSGSGI---DSILDAANIL---------KPALSRGTLRTVGATTQDEYQKHIEKDA 356 Query: 414 RLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQ 473 L RR ++ +E+ ++ + Q + + Sbjct: 357 ALVRRFAKVTIEEPSVADSVAILQGLKPAYEAHHKVTISDQAVVTAVAYAKRYLTSKNLP 416 Query: 474 TIKAELEQAKIAIEQARRVGDLARMS------ELQYGKIPELEKQLEAATQLEGKTMRLL 527 +L A Q R G + L GK + + L A + E + Sbjct: 417 DSAIDLLDEASATVQNRAKGQVEEGGLTALDQALMAGKYKTVTQLLLKAQEAENQATSY- 475 Query: 528 RNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRS 587 +VT+ +I L+R +GIPV+++ +++ +K L +EQELH RVIGQ EA+ AVS AIRR+ Sbjct: 476 SLEVTEEDILATLSRLSGIPVTKLSQTDAKKYLNLEQELHKRVIGQEEAISAVSRAIRRN 535 Query: 588 RAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLV 647 ++G+ +RP GSF+FLGPTGVGKTEL KALA +FD + A++R DMSE+MEK + SRL Sbjct: 536 QSGIRTGHRPSGSFMFLGPTGVGKTELAKALAEILFDDESALIRFDMSEYMEKFAASRLN 595 Query: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTV 707 GAPPGYVGYEEGG LTE VR +PYSV+L DE+EKAHPD+FN+LLQVLDDG LTD +GR V Sbjct: 596 GAPPGYVGYEEGGELTEKVRNKPYSVLLFDELEKAHPDIFNVLLQVLDDGVLTDRKGRKV 655 Query: 708 DFRNTVVIMTSNLGSDLIQER----FGELD----YAHMKELVLGVVSHNFRPEFINRIDE 759 DF NTV+IMTSNLG+ +++ FG LD H+++ + + +RPEFINRIDE Sbjct: 656 DFSNTVIIMTSNLGATALRDDKTVGFGALDLSKSQEHVEKRIFEALKKAYRPEFINRIDE 715 Query: 760 VVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKR 819 VVFH L E + + ++ +K L +G + + ALKLL++ GYDP GARPL+R Sbjct: 716 KVVFHSLTEADMQDVVKVMVKPLIAVAASKGITLKLQASALKLLAKEGYDPEMGARPLRR 775 Query: 820 AIQQQIENPLAQQILSGELVPGKVIRLEVNEDRI 853 +Q ++E+PLA+ +L GEL G +++ V +++ Sbjct: 776 LLQTKLEDPLAEMLLRGELPAGVTLKVGVKAEQL 809 >UniRef50_B0JIB9 ATP-dependent Clp protease ATPase subunit n=11 Tax=cellular organisms RepID=B0JIB9_MICAN Length = 795 Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 200/587 (34%), Positives = 307/587 (52%), Gaps = 23/587 (3%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 + K A+ AQ A + + HL+ L+ + + + +L + + R Sbjct: 1 MFEYFNQKAIKAVMFAQEEARRTGHSVVGTEHLLLGLIGEATATAALILKDLKVTLHESR 60 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES-RG 120 I R + ++ + ++ + A++ G+N I++E +LA Sbjct: 61 RLIEGMTGRG--TGYSPVNIPFTPKAKKMFEQAFQEARQLGENAIATEHLLLAITSDPES 118 Query: 121 TLADILKAAGATTANITQAIEQMRGGESVN----------DQGAEDQRQALKKYTIDLTE 170 A IL G + + + G + + DQ Q L +Y +L + Sbjct: 119 LAAKILIMQGVDLIKLRGLLIKNAGEKVASGRFTAKSDYEDQKNAPQGGILAQYGRNLNQ 178 Query: 171 RAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPE 230 + GK+DPVIGR+ EI R +Q+L RRTK+NP+L+GEPGVGKTAI EGLAQRI NG++PE Sbjct: 179 EVKNGKIDPVIGREPEIERVVQILGRRTKSNPILLGEPGVGKTAIAEGLAQRIHNGDIPE 238 Query: 231 GLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKAD 290 L+ ++V+ALDMG+L+AG ++RG+FEERLKG++ ++ K GN+ILFIDE+HT+VGAG Sbjct: 239 LLQDKQVIALDMGSLLAGTRFRGDFEERLKGIVEEVRKS-GNIILFIDEIHTLVGAGSMG 297 Query: 291 GAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAIL 350 GAMDA N+LKPALARGEL C+GATTLDEY+++IE+DAALERRFQ V V EP+ E I IL Sbjct: 298 GAMDASNLLKPALARGELQCLGATTLDEYKRHIERDAALERRFQPVMVGEPTKEQAIEIL 357 Query: 351 RGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPE 410 RGLK YE H V+ AI AA LS RYI DR LPDKAIDL+DEA S ++ + Sbjct: 358 RGLKATYEDFHQVKYDQKAIEAAVNLSSRYINDRFLPDKAIDLLDEAGSRTHLRYSLQST 417 Query: 411 ELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDK-----ERQYSELEEEWKAE 465 + + E + +++E ++ ++ E + + + Sbjct: 418 SPAEVREESPLINPESLIPVVDAEEIAQIVAAWTGIPVTQLTETESESLLNLECQLHERI 477 Query: 466 KASLSGTQTIKAELEQAKIAIEQARR-VGDLARMSELQYGKIPELEKQLEAATQLEGKTM 524 + + +A++ ++ R + GK EL K L L G Sbjct: 478 IGQQEAVNAVSRAIRRARVNLKNPNRPIASFIFAGPTGVGK-TELTKALAKL--LFGSES 534 Query: 525 RLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVI 571 ++R +++ + +++ G P + +E +L + +RV+ Sbjct: 535 SMIRLDMSEFMESHTVSKLIGAPPGYIGYNEGGQLTEAVRRQPYRVV 581 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 195/479 (40%), Positives = 284/479 (59%), Gaps = 16/479 (3%) Query: 390 AIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELS 449 A +L+ A + +Q + LE++ E +K++ + L Sbjct: 302 ASNLLKPALARGELQCLGATTLDEYKRHIERDAALERRFQPVMVGEPTKEQAIEILRGLK 361 Query: 450 DKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPEL 509 + +++ + KA +A+++ + + AI+ G + P Sbjct: 362 ATYEDFHQVKYDQKAIEAAVNLSSRYINDRFLPDKAIDLLDEAGSRTHLRYSLQSTSPA- 420 Query: 510 EKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHR 569 E + L V EIA+++A WTGIPV+++ E+E E LL +E +LH R Sbjct: 421 ----EVREESPLINPESLIPVVDAEEIAQIVAAWTGIPVTQLTETESESLLNLECQLHER 476 Query: 570 VIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAM 629 +IGQ EAV+AVS AIRR+R L +PNRPI SF+F GPTGVGKTEL KALA +F S+ +M Sbjct: 477 IIGQQEAVNAVSRAIRRARVNLKNPNRPIASFIFAGPTGVGKTELTKALAKLLFGSESSM 536 Query: 630 VRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNI 689 +R+DMSEFME H+VS+L+GAPPGY+GY EGG LTEAVRR+PY V+L DE+EKAHPDVFN+ Sbjct: 537 IRLDMSEFMESHTVSKLIGAPPGYIGYNEGGQLTEAVRRQPYRVVLFDEIEKAHPDVFNL 596 Query: 690 LLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQ-----------ERFGELDYAHMK 738 LLQ+L+DG LTD QGR VDF+NT++IMTSN+GS +I+ + F + Y + Sbjct: 597 LLQLLEDGHLTDSQGRRVDFKNTLIIMTSNIGSKVIEKGGNSLGFEIADDFAQSRYQQIS 656 Query: 739 ELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE 798 V + FRPEF+NR+DE++VF L + + IA I + L K+L E+G + ++ Sbjct: 657 NRVTEELKQYFRPEFLNRLDEIIVFRQLTREEVTQIADILIADLAKQLTEKGISVEVTAA 716 Query: 799 ALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857 L+ GYDP YGARPL+RA+ +++E+ LA +LSG++ G L+V + +V V Sbjct: 717 FKDLVINEGYDPSYGARPLRRALTRRLEDSLAVAMLSGKVNSGDHAILDVTAEAVVTVS 775 >UniRef50_D2VM27 Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VM27_NAEGR Length = 828 Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 180/598 (30%), Positives = 310/598 (51%), Gaps = 17/598 (2%) Query: 267 AKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKD 326 K ILFI + + MV ++L+P L + L V T EY + K+ Sbjct: 199 EKTNQPKILFIHQFYNMVDDYSYSFYDSVSSVLQPLLEKKRLKLVTCMTPSEYAK-FTKN 257 Query: 327 AALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQL 386 L F+ + V EP+ T+ I+ KE E H V I + + A LS+RYI + Sbjct: 258 P-LASHFEVIKVGEPNFATTLDIVTKKKEYLEASHGVFIDNDIVEEALLLSNRYIPLKAN 316 Query: 387 PDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNE 446 P K I ++DE AS + + S P + L+ +I ++ ++ + + S L + Sbjct: 317 PMKCISVLDELASIVEKRGCSIPINVLELEDKIKKVSIDIDKKSDDDIDTSS-----LMK 371 Query: 447 ELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQ------ARRVGDLARMSE 500 +L + Y+ WKAE +L + + L K + + R S+ Sbjct: 372 KLEKLKESYATKYSAWKAEYQALQSYRENRVRLIGLKKELGDCIASITSPDCESAKRASK 431 Query: 501 LQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRM--MESEREK 558 + IPE++ L + + + + N+ T +++ V++R +GIP + + Sbjct: 432 IIEDDIPEVKASL-KIFEKQSAKNKYVNNRATLDDLSVVISRMSGIPQKDLYFTTQKNHS 490 Query: 559 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 618 L ME L +VIGQ +A+ ++S IR ++ GL D N+P S LF G +GVGKTEL K + Sbjct: 491 LNNMESILEEQVIGQKQAISSISKTIRVAKLGLRDANKPQASLLFCGFSGVGKTELAKQI 550 Query: 619 ANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678 A ++ ++ ++ IDM+++ + SVS L+G GYVGY++GG LT +++ P+ VI+ DE Sbjct: 551 AKVVYGNENSVSVIDMTKYNTEFSVSGLIGTSAGYVGYDDGGELTNTIKKNPFQVIIFDE 610 Query: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK 738 +EKAH V+NILL V ++G + G +V ++T++I+TSN+G+ + + E + Sbjct: 611 IEKAHSRVWNILLPVFEEGVCQNNYGESVSLKDTIIILTSNVGTKRLFQHKEEDKDLTQQ 670 Query: 739 ELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERG-YEIHISD 797 E+ + F PEF+NR+D++V+F+ L + I IQL++L +RL ++ +I +S Sbjct: 671 EIFHEEIKETFAPEFLNRLDDIVIFNELSMHDLDKILSIQLRKLEERLSKKREIKIELST 730 Query: 798 EALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855 EA + L N +D GARP+KR IQ + P++ G+L ++++V+E ++ Sbjct: 731 EARQFLIFNSFDIQLGARPIKRNIQNYLSAPISDLFYQGKLDKHCTLKVDVDEKKLKV 788 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%) Query: 202 PVLIGEPGVGKTAIVEGLAQRIING--EVPEGLKGRRVLALDMGAL 245 P+ +GE GVG+ +I+E LA +I VPE L+ +++ L + L Sbjct: 75 PLYVGENGVGRRSIIESLAYKITKNPENVPERLRNTKIIELSVDNL 120 >UniRef50_A7AW26 Chaperone clpB, putative n=1 Tax=Babesia bovis RepID=A7AW26_BABBO Length = 833 Score = 418 bits (1074), Expect = e-115, Method: Composition-based stats. Identities = 227/866 (26%), Positives = 379/866 (43%), Gaps = 125/866 (14%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 L+ + L A LA + IE ++ +LL S L + ++ G + T+++ Sbjct: 32 LSTEVSAVLNHASELAKRSGSGSIESEFIVKSLL-DSCSSYRKWLRTIRLSPGPIATELD 90 Query: 66 QALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADI 125 + R T G+ + + + LA R EL A L+ L I Sbjct: 91 DFIKRRR---YTNGEERVGRSSQSAILYAQSLALSRSKPVGILELSE-ALLKYDDFLRGI 146 Query: 126 LKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDE 185 + + A + Q A+++ +LTE A+ G + +GR+ Sbjct: 147 HQRSDAGKPKVDQ--------------------NAVEECLYNLTEAAKNGSGNVFVGREN 186 Query: 186 EIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGAL 245 E+ R L R KNN +LIGEPGVGKTA+VE LA ++ + V +LD+ L Sbjct: 187 ELERLKGSLNRMRKNNVLLIGEPGVGKTALVERLAVDMLLEDP-----NITVYSLDLCRL 241 Query: 246 VAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALAR 305 +G RGE E +LK + + + + G ILFIDE+H ++ + ++ N+LKP + Sbjct: 242 YSGQGTRGELEAKLKSIFDTV--KNGKSILFIDEIHHLIQ--NQENGVNVTNLLKPIMTS 297 Query: 306 GELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQI 365 + +G+TT EY QY +D A ERRF+ + + E S ++T+AIL G + E +H V+I Sbjct: 298 TLVKIIGSTTAKEYHQYFRRDRAFERRFEILRLHENSADETLAILHGSRPSLEDYHGVKI 357 Query: 366 TDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLE 425 TD A+VA+ LS R+I +R LPDKAIDL+DEAA + + + + L Sbjct: 358 TDDALVASVELSTRFIPNRYLPDKAIDLLDEAAMLSKRKRSCSNDLFELLRH-------- 409 Query: 426 QQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIA 485 K ++ R N++L+ + +E +K+ L Q + E Sbjct: 410 -----KTGIISALLRGKSGNDQLNRVLSEIESMESRYKSLHGKLRDVQQQQQNHE----- 459 Query: 486 IEQARRVGDLARMSELQYGKIPELEKQLEAAT--------QLEGKTMRLLRNK------- 530 + G+L + SEL+ KIPE+ + + + + +L Sbjct: 460 -----KNGNLTKASELKNHKIPEIIRLIVQLQSDIKMVINKTIEDSKDMLPVDMLNDGNT 514 Query: 531 ---------------VTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNE 575 V +IA L++ TGIPVS ++ S+ + Q+L + V+GQNE Sbjct: 515 GVSPASDPDVFSGVYVDRIDIASALSQSTGIPVSVVLRSQMGHYEQAVQQLSNIVLGQNE 574 Query: 576 AVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMS 635 AV I + +A + + ++GP GVGK L ++ MF A+ I S Sbjct: 575 AVYKTLLHIYMYSSSIASGRKIGAALYYVGPPGVGKRLLLNHVSR-MFGM--ALKYICGS 631 Query: 636 EFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLD 695 + ++ + LVG+PPGY+G+ EGG L E ++ PY ++ ++ H +V N+L+ +D Sbjct: 632 NLVSSNATNILVGSPPGYIGHREGGMLCEWIKDHPYGIVAFEDAHLLHVNVVNLLIGAID 691 Query: 696 DGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFIN 755 +G L D QG + R + SN P Sbjct: 692 NGFLVDNQGDQCNLRQCFFVFVSNDH-------------------------EQLSPLIKQ 726 Query: 756 RIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGAR 815 D+V+ F PL ++ + I +L + ++ S AL+ L Y G + Sbjct: 727 NADDVISFEPLSKESVERIICKELASIDV------VKLRASKAALEHL----YHLAIGTK 776 Query: 816 PLKRAIQQQIENPLAQQILSGELVPG 841 + I + + + +A ++SG + G Sbjct: 777 SIPNLIYRTLGSSIANLVVSGRVPIG 802 >UniRef50_D1Y107 Negative regulator of genetic competence ClpC/MecB n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y107_9BACT Length = 774 Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats. Identities = 187/417 (44%), Positives = 257/417 (61%), Gaps = 15/417 (3%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 T + + + A AL + FI HLM L+ +E + L AG+ A + +I Sbjct: 5 FTERSKRVIQIAHREALRLGHAFIGTEHLMIGLIAEESSVAALALKEAGLAAEDVAREI- 63 Query: 66 QALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLA-D 124 AL D+ S VLN LA++ +++ +E +L L + A Sbjct: 64 LALRPPAAPYAQPVDLPLSDRARGVLNAAIHLARELHSSYVGTEHLLLGVLSAPECTACH 123 Query: 125 ILKAAGATTANITQAIEQMRGGESVNDQGAEDQR------------QALKKYTIDLTERA 172 L G T N+ ++++ +S + D+ L KY +DLT +A Sbjct: 124 ALAELGLDTENLRVSLKKQLLAQSSRQEAENDKENGDARPAADVKTPTLDKYCVDLTAKA 183 Query: 173 EQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGL 232 +G+LDP+IGR++E+ R +Q+L RR KNNPVL+G+PGVGKTAIVEGLA +I G P L Sbjct: 184 AKGELDPLIGREQEMHRMMQILCRRRKNNPVLVGDPGVGKTAIVEGLAYKIQKGSAPSLL 243 Query: 233 KGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGA 292 KG+RV+ L MG LVAG KYRGEFE+R+K ++++L + NVILFIDELHT+VGAG A+G+ Sbjct: 244 KGKRVVELTMGTLVAGTKYRGEFEDRMKKIVDELTAAK-NVILFIDELHTVVGAGSAEGS 302 Query: 293 MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRG 352 +DA N+LKP+LARGE +GATT DEY + IEKDAALERRFQ V V EP + +AIL+G Sbjct: 303 LDAANILKPSLARGEFQVIGATTRDEYTKNIEKDAALERRFQPVAVGEPDQDAALAILQG 362 Query: 353 LKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKP 409 LKE YE HH V+ T+ A+ AA LS RY++DR LPDKAIDLIDEA + +R+ +D + Sbjct: 363 LKESYEKHHSVRYTEGALEAAVRLSSRYLSDRSLPDKAIDLIDEAGAKVRLDLDGRQ 419 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 182/418 (43%), Positives = 262/418 (62%), Gaps = 13/418 (3%) Query: 449 SDKERQYSELEEEWKAEKASLSGTQTIKAELEQA------KIAIEQARRVGDLARMSELQ 502 + ER++ + + A+L+ Q +K E+ + A+E A R+ Sbjct: 337 AALERRFQPVAVGEPDQDAALAILQGLKESYEKHHSVRYTEGALEAAVRLSSRYLSDRSL 396 Query: 503 YGKIPELEKQLEAATQLEGKTMRLLRN-KVTDAEIAEVLARWTGIPVSRMMESEREKLLR 561 K +L + A +L+ ++ V + E+A VL+ W+GIPV + E E ++LLR Sbjct: 397 PDKAIDLIDEAGAKVRLDLDGRQIPEGLTVDEEEVAGVLSEWSGIPVKTLTEHEAQRLLR 456 Query: 562 MEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANF 621 +E E+H R++GQ+EAV A+ A+RRSR+GL DP RP+GSFLFLGP+GVGKTEL + LA Sbjct: 457 LESEIHQRLVGQDEAVSALCRAVRRSRSGLKDPRRPVGSFLFLGPSGVGKTELARCLARA 516 Query: 622 MFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEK 681 +F S++A++ DMSE+ME+H ++L+GAPPGYVGY+E G LTEAVRR P+SV+L DE+EK Sbjct: 517 LFGSEKALLAFDMSEYMERHEAAKLIGAPPGYVGYDEEGRLTEAVRRHPWSVVLFDEIEK 576 Query: 682 AHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE------RFGELDYA 735 A+PDVFN+LLQ+L++GRLTD GRTVDF+NTVVIMTSNLG + E + Sbjct: 577 ANPDVFNLLLQILEEGRLTDAHGRTVDFKNTVVIMTSNLGVRETAKAGLGFSASAEAEKK 636 Query: 736 HMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHI 795 E VLG V FRPEF+NR+D +VFHPL + + + I + L RL E G + + Sbjct: 637 KQSEAVLGAVKEFFRPEFLNRVDAQLVFHPLSAEEMTRVFDIMMFDLRARLGEHGIILSM 696 Query: 796 SDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRI 853 + +A + L GARPL+R IQ +IE+PL+ ILSGE+ G + ++ + + Sbjct: 697 AKDAREFLLRAAAAQNQGARPLRRLIQTKIEDPLSDLILSGEVPDGSTVDCVLDGEAL 754 >UniRef50_C9RMJ0 ATPase AAA-2 domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RMJ0_FIBSS Length = 838 Score = 412 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 203/564 (35%), Positives = 308/564 (54%), Gaps = 43/564 (7%) Query: 22 LGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQALNRLPQVEGTGGD- 80 + + HL+ L+ ++ G S L + +N +L I +AL+ + GGD Sbjct: 24 RNLGSDCVTVEHLLFGLVREDSGVASETLKALKVNLTELSETIQRALSTNGGLMTVGGDS 83 Query: 81 ----VQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALE-SRGTLADILKAAGATTAN 135 + + VL K+A++ G FI E +LA L+ + A L T N Sbjct: 84 HGGLLTFTGQCKAVLYNAAKIAKEEGVQFIGPEHLMLAILQQTDSPAAATLSTYNVTFEN 143 Query: 136 ITQ---AIEQMRGGESVNDQGAEDQ------------------RQALKKYTIDLTERAEQ 174 + I++ G+ +++ ED+ L+ + DLT A Sbjct: 144 YQEMLMQIKRQADGQPMDEGQPEDEPRERYTQTRQANPQSRSKTPILEHFGRDLTAMARA 203 Query: 175 GKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKG 234 GKLDP+IGR+ EI R IQ+L RR KNNP LIGEPGVGKTAI+EGLA +I+ ++P+ L Sbjct: 204 GKLDPIIGREAEIERLIQILCRRKKNNPALIGEPGVGKTAIIEGLALKIVQRKIPDLLAN 263 Query: 235 RRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMD 294 +RV+ LD+ A+VAG KYRG+FEER+KG++ +L + +VILFIDELHT+VGAG ++G++D Sbjct: 264 KRVVTLDVAAMVAGTKYRGQFEERVKGLIMELQRVGNSVILFIDELHTIVGAGGSEGSLD 323 Query: 295 AGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLK 354 A N+ KPALARGEL C+GATT DEYR+YIEKD ALERRFQ + V P+VED+I IL GL+ Sbjct: 324 ASNIFKPALARGELQCIGATTFDEYRKYIEKDPALERRFQTIIVNPPTVEDSIQILEGLR 383 Query: 355 ERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDR 414 +YE HH+V T A+ AA L RYI++R LPDKAID++DEA + +R+ P++L Sbjct: 384 PKYEQHHNVHYTPDAVRAAVELGERYISERFLPDKAIDVLDEAGARVRLNSIKIPQDLQN 443 Query: 415 LDRRIIQLKLEQQALMKESDEAS----KKRLDMLNEELSDKERQYSELEEE--------W 462 ++ + +++ + D S + R + L ++++++Q E E Sbjct: 444 MEDELGVCLQKKEEAVANQDYTSAAQLRAREEELQNSIAERKKQLQSEESETPVVDDNVI 503 Query: 463 KAEKASLSGTQTIKAELEQAKIAI----EQARRVGDLARMSELQYGKIPELEKQLEAATQ 518 + + ++G + E+A+ I E +RV + + I + + Sbjct: 504 RDVISKMTGIPVRRLGGEEAQKLIHLGDEIKQRVIGQDQAVDAIVKSIRRSRAGIRNNKR 563 Query: 519 LEGKTMRLLRNKVTDAEIAEVLAR 542 G + L V E+A+VL + Sbjct: 564 PMGSFLFLGPTGVGKTELAKVLCK 587 Score = 379 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 170/393 (43%), Positives = 252/393 (64%), Gaps = 11/393 (2%) Query: 470 SGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRN 529 Q ++ EL E+A D ++L+ + EL+ + + + ++ Sbjct: 439 QDLQNMEDELGVCLQKKEEAVANQDYTSAAQLR-AREEELQNSIAERKK-QLQSEESETP 496 Query: 530 KVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA 589 V D I +V+++ TGIPV R+ E +KL+ + E+ RVIGQ++AVDA+ +IRRSRA Sbjct: 497 VVDDNVIRDVISKMTGIPVRRLGGEEAQKLIHLGDEIKQRVIGQDQAVDAIVKSIRRSRA 556 Query: 590 GLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGA 649 G+ + RP+GSFLFLGPTGVGKTEL K L +F S++++VRIDMSE+MEKHSVSRL+GA Sbjct: 557 GIRNNKRPMGSFLFLGPTGVGKTELAKVLCKELFGSEDSLVRIDMSEYMEKHSVSRLIGA 616 Query: 650 PPGYVGYEE-GGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVD 708 PPGYVG+E+ GG L+E VR+ PYSV+LLDE+EKAHPD++N+LLQ+LDDG LTD GR ++ Sbjct: 617 PPGYVGFEDGGGQLSEKVRKHPYSVVLLDEIEKAHPDIYNLLLQILDDGILTDSYGRKIN 676 Query: 709 FRNTVVIMTSNLGSDLIQERFGE--------LDYAHMKELVLGVVSHNFRPEFINRIDEV 760 F+NT++IMTSN G+ ++ G DY M+ + V F PEF+NR+DE Sbjct: 677 FKNTIIIMTSNAGAREVRHSSGMGFTKMGETDDYERMETAIREEVKRVFSPEFLNRVDEQ 736 Query: 761 VVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRA 820 +VF L ++ + S+ IQ+ L K L +RG + +S EA + + + YD GARP++R+ Sbjct: 737 IVFRALSKKDLVSVVDIQMGFLQKNLSDRGILLEMSQEAKEFVVNHNYDASLGARPIRRS 796 Query: 821 IQQQIENPLAQQILSGELVPGKVIRLEVNEDRI 853 IQ +E+ +A+ +L G + I + V ++ Sbjct: 797 IQNLVEDEIAEGLLLGTMTDFSTIYVGVENGKL 829 >UniRef50_Q1IZ22 ATPase AAA-2 n=8 Tax=Deinococci RepID=Q1IZ22_DEIGD Length = 745 Score = 411 bits (1055), Expect = e-113, Method: Composition-based stats. Identities = 204/570 (35%), Positives = 293/570 (51%), Gaps = 17/570 (2%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 ++R ++ +L A+ + + P HL+ L+ EGG+ + +L+ G + LR Sbjct: 1 MNRYDDRARLVFHYAREEGNRLGHAMVGPEHLLLGLMR-EGGTAATILSEFGASLDGLRR 59 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL-ESRGT 121 + + + R + + RV+ L A+ G S+E +L + E G Sbjct: 60 RVEEIIGR-GEGNRLNDAPSITPRARRVMELASAEARSLGAQVTSTEHILLGIIREGDGV 118 Query: 122 LADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVI 181 IL+ I + G S L +Y DLT++A +GKLDPVI Sbjct: 119 AFRILQELTKDVDTIRWRVLAQGDGSS-GKAAKPVATPFLDEYGRDLTKQAREGKLDPVI 177 Query: 182 GRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALD 241 GR EEIRR Q+L RRTKNNPVLIG+PGVGKTAIVEGLA I P L G R+++LD Sbjct: 178 GRSEEIRRVTQILTRRTKNNPVLIGDPGVGKTAIVEGLALAIFEKRTPPNLHGVRLVSLD 237 Query: 242 MGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKP 301 + +VAG KYRGEFEERL+ ++ +L V+ FIDELHT+VGAG A+G +DA N+LKP Sbjct: 238 LSGVVAGTKYRGEFEERLRQIIEELR--NAKVMAFIDELHTLVGAGGAEGTLDAANILKP 295 Query: 302 ALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHH 361 AL+RGE+ +GATT EY +YIEKDAALERRFQ V V EPS +T+ ILRGL+ RYE HH Sbjct: 296 ALSRGEIQVIGATTTGEYHRYIEKDAALERRFQPVIVLEPSPAETLQILRGLRPRYEEHH 355 Query: 362 HVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQ 421 VQI + A+ A + R + R PDKAIDLIDEAAS +R+ + + D + Sbjct: 356 GVQIPESALELAVRIGERSLPGRNFPDKAIDLIDEAASRVRLNMSVGLPVSETEDGEPMV 415 Query: 422 LKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQ 481 + + ++++ D +LSD E Q E + + + L + Sbjct: 416 SREDIESVINSMGGI---YSDESAGQLSDLEEQLQE------QVYGQPEAIKALSSALRR 466 Query: 482 AKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLA 541 A++ + RV L K L A L G L+R +++ + A ++ Sbjct: 467 ARVGLGGRTRVSASFLFVGPSGVGKTHLAKAL--AKTLFGSERSLIRVDMSEFQEAHSIS 524 Query: 542 RWTGIPVSRMMESEREKLLRMEQELHHRVI 571 + G P + + +L + VI Sbjct: 525 KLIGSPPGYVGFEQGGRLTEAVRRQPFSVI 554 Score = 306 bits (783), Expect = 3e-81, Method: Composition-based stats. Identities = 153/422 (36%), Positives = 240/422 (56%), Gaps = 28/422 (6%) Query: 449 SDKERQYSELEEEWKAEKASLSGTQTIKAELEQA------KIAIEQARRVGDLARMSELQ 502 + ER++ + + +L + ++ E+ + A+E A R+G+ + Sbjct: 321 AALERRFQPVIVLEPSPAETLQILRGLRPRYEEHHGVQIPESALELAVRIGERSLPGRNF 380 Query: 503 YGKIPELEKQ------LEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESER 556 K +L + L + L V+ +I V+ GI + Sbjct: 381 PDKAIDLIDEAASRVRLNMSVGLPVSETEDGEPMVSREDIESVINSMGGI----YSDESA 436 Query: 557 EKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCK 616 +L +E++L +V GQ EA+ A+S+A+RR+R GL R SFLF+GP+GVGKT L K Sbjct: 437 GQLSDLEEQLQEQVYGQPEAIKALSSALRRARVGLGGRTRVSASFLFVGPSGVGKTHLAK 496 Query: 617 ALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILL 676 ALA +F S+ +++R+DMSEF E HS+S+L+G+PPGYVG+E+GG LTEAVRR+P+SVILL Sbjct: 497 ALAKTLFGSERSLIRVDMSEFQEAHSISKLIGSPPGYVGFEQGGRLTEAVRRQPFSVILL 556 Query: 677 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAH 736 DE+EKAHPDV+N LQVLDDGRLTDG GRTVDFR T++IMTSN G ++ + ++ Sbjct: 557 DEIEKAHPDVYNTFLQVLDDGRLTDGLGRTVDFRRTIIIMTSNTGFNV----NPTVGFSP 612 Query: 737 MKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHIS 796 + + + F PEF++R+D+V+ F PLGE + +AQ L + + L R + Sbjct: 613 VTPDNNAPLRNIFTPEFLDRLDDVIRFRPLGEDELVRVAQQLLGEMREELASRELNVTFD 672 Query: 797 DEALKLL-----SENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNED 851 L + + V +R L+ ++++IE+PLA +++ G+ +R+ + +D Sbjct: 673 PAIAAWLVSKLKARSPKHAVGSSRQLRTLLREEIEDPLALELIGN---AGEELRVVLGQD 729 Query: 852 RI 853 I Sbjct: 730 GI 731 >UniRef50_A7HJU2 ATPase AAA-2 domain protein n=4 Tax=Thermotogaceae RepID=A7HJU2_FERNB Length = 741 Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 190/479 (39%), Positives = 286/479 (59%), Gaps = 9/479 (1%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 ++ T Q L + + + P H++ +L + +LT ++ L Sbjct: 3 FNMEDFTENAQEILQSVNDVLNRYRQNQLAPEHILLTMLENTKTAAVDILTFLNVDTDAL 62 Query: 61 RTDINQALNRLPQVEGT----GGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLA-A 115 R D+ + ++ + + + D +V+N + A++ GD + ++ +LA A Sbjct: 63 RRDVERIISSKGGYYYSGSGGTNQIYITPDTTKVINEAKREAKRMGDEKVGTDHLLLAMA 122 Query: 116 LESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQG 175 + T +L G T + AI+Q+R + +++ + L K+T +LTE A+ G Sbjct: 123 IVPETTTYRLLSKYGVTQDALYSAIKQLRMQRTYSEE---ENIDILAKFTENLTEMAKNG 179 Query: 176 KLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGR 235 +L PV+GR+ EI R I++L R+ KNNPVLIG+PGVGKTAIVEGLAQRI+N +VPE LK + Sbjct: 180 QLMPVVGRENEINRMIEILGRKIKNNPVLIGDPGVGKTAIVEGLAQRIVNKDVPEFLKNK 239 Query: 236 RVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDA 295 +L LD+ LVAG K+RGEFEERLK +++ + K+ +VILFIDELHT+VGAG A+GA+DA Sbjct: 240 TILKLDLARLVAGTKFRGEFEERLKKLID-VLKKRTDVILFIDELHTVVGAGAAEGALDA 298 Query: 296 GNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKE 355 GN+LKP LARG L +GATT++EYR++IEKD AL RRFQ +FV EPS+E+TI IL+GLK Sbjct: 299 GNILKPELARGTLRVIGATTVEEYRKHIEKDKALARRFQVIFVPEPSIEETIEILKGLKA 358 Query: 356 RYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRL 415 ++E H+V I+D AI AA +S RYI DR LPDKA+DL+DEAA+ ++ + E D Sbjct: 359 KFEEFHNVSISDKAIEFAAKMSARYITDRFLPDKAVDLVDEAAARAKIDGKKEIVEEDIA 418 Query: 416 DRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQT 474 + +M + E K +++E+ D+E + K +A + + Sbjct: 419 SVIERWTGIPVGKIMGDEKEKIKNLEKIIHEKFVDQEEAVKIVSNAIKMSRAGIRNPKR 477 Score = 380 bits (977), Expect = e-104, Method: Composition-based stats. Identities = 176/403 (43%), Positives = 259/403 (64%), Gaps = 2/403 (0%) Query: 451 KERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELE 510 R++ + + + ++ + +KA+ E+ + + A+MS + Sbjct: 332 LARRFQVIFVPEPSIEETIEILKGLKAKFEEFHNVSISDKAIEFAAKMSARYITDRFLPD 391 Query: 511 KQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRV 570 K ++ + + + ++ + +IA V+ RWTGIPV ++M E+EK+ +E+ +H + Sbjct: 392 KAVDLVDEAAARAKIDGKKEIVEEDIASVIERWTGIPVGKIMGDEKEKIKNLEKIIHEKF 451 Query: 571 IGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMV 630 + Q EAV VSNAI+ SRAG+ +P RP+G FLFLGPTGVGKTEL K LA+ +F S++A++ Sbjct: 452 VDQEEAVKIVSNAIKMSRAGIRNPKRPLGVFLFLGPTGVGKTELAKRLADVLFGSEKALI 511 Query: 631 RIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNIL 690 RIDMSE+MEKHSV+RL+GAPPGYVGYEEGG LTE VRRRPYSV+L DE+EKAHP+VFN+L Sbjct: 512 RIDMSEYMEKHSVARLIGAPPGYVGYEEGGQLTEQVRRRPYSVVLFDEIEKAHPEVFNVL 571 Query: 691 LQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFR 750 LQ+ DDGRLTDG+G TVDFRNT++IMTSN+GSD+I + E + + + FR Sbjct: 572 LQLFDDGRLTDGKGTTVDFRNTIIIMTSNIGSDVIMQDIEEGFEDLIPRHIEEEMRKYFR 631 Query: 751 PEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR--LEERGYEIHISDEALKLLSENGY 808 PE INRID VVF PL ++HI I +I K L +R ++ ++ + + + L+ GY Sbjct: 632 PELINRIDAAVVFKPLKKEHIKEIIEIYTKELNERLIDSDKDIKVVLDESMREYLATEGY 691 Query: 809 DPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNED 851 P GARPL+R + +E LA+ I+ ++ G+ ++ E Sbjct: 692 VPSMGARPLRRLFENTVEFKLAELIIDEKVKEGQTVKFIWEEG 734 >UniRef50_Q3JL54 ATP-dependent Clp protease, ATP-binding subunit ClpB n=51 Tax=Proteobacteria RepID=Q3JL54_BURP1 Length = 1042 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 194/492 (39%), Positives = 271/492 (55%), Gaps = 26/492 (5%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +++L + AL A + + + HL++ L ++ V+ LL + G +A +LR Sbjct: 10 IEQLNPYCRNALESAVGACVARRHDDVAVEHLLARLCDEPSADVALLLRACGADAARLRR 69 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQ-KRGDNFISSELF---------- 111 + AL+ P G GG + L+ +L +A + GD I S Sbjct: 70 QADAALDARP--AGDGGRPAFAPSLLALLQDAWLIASLELGDTHIRSAAVLAAAVARAAR 127 Query: 112 --------VLAALESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKK 163 VL +L +A A+GA +I D A+ + Sbjct: 128 QPSPGGDDVLQSLRKDALVARF--ASGACARSIESRASGALDAAPGEASDTRDASSAIAR 185 Query: 164 YTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRI 223 Y D T +A G +DPV GRD EIR+ + +L RR KNNPV +GEPGVGKTA+VEGLA RI Sbjct: 186 YCEDFTAKARAGGIDPVFGRDAEIRQIVDILARRRKNNPVCVGEPGVGKTAVVEGLALRI 245 Query: 224 INGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTM 283 G+VP L+G +L LD+G L AGA +GEFE+RLK V+ ++ + V+LFIDE HT+ Sbjct: 246 AEGDVPATLRGATLLGLDLGMLQAGASVKGEFEQRLKRVIAEIRASQTPVVLFIDEAHTL 305 Query: 284 VGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSV 343 +GAG A GA DA N+LKPALARGEL + ATT EY++Y EKDAAL RRFQ V + P V Sbjct: 306 IGAGGAAGASDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALARRFQPVKLDSPDV 365 Query: 344 EDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRM 403 ++ ILRGLKERY+ H V I D A+VAAA LS RYI RQLPDKAIDL+D A + +++ Sbjct: 366 ATSVMILRGLKERYQDAHGVTIRDDALVAAAELSARYITGRQLPDKAIDLLDTACARVKV 425 Query: 404 QIDSKPEELDRLDRRIIQLKLEQQALMKESDE---ASKKRLDMLNEELSDKERQYSELEE 460 + +KP L+ R I L+ E++AL E E R+ ++ EL+ + L + Sbjct: 426 RQQTKPAALEDAQRAIQALERERRALRDELAERCAPDTPRVADIDRELAALSARAGALRD 485 Query: 461 EWKAEKASLSGT 472 W A++ + Sbjct: 486 AWAAQRDAAQAL 497 Score = 323 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 137/341 (40%), Positives = 207/341 (60%), Gaps = 7/341 (2%) Query: 518 QLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAV 577 + + L+R V IA+V+A WTGI ++ +LR+ L R+ GQ+ A+ Sbjct: 610 EHAQRDTPLVRIDVDPDAIADVVADWTGIAAGKLRRDRANVMLRLADTLRRRIRGQDHAI 669 Query: 578 DAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEF 637 + +S A++ AG+ DP RP+G FL GP+G GKTE A+A+ +F + ++V ++MSEF Sbjct: 670 EQISEAVKAGAAGVHDPRRPLGVFLLAGPSGTGKTETALAVADALFGDERSIVVVNMSEF 729 Query: 638 MEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDG 697 E+H VSRL+G+PPGYVGY EGG LTEAVR+RPYSV+LLDEVEKAHPDV N+ QV D G Sbjct: 730 QERHDVSRLIGSPPGYVGYGEGGMLTEAVRQRPYSVVLLDEVEKAHPDVLNLFYQVFDKG 789 Query: 698 RLTDGQGRTVDFRNTVVIMTSNLGSDLIQE---RFGELDYAHMKELVLGVVSHNFRPEFI 754 L+DG+G+ VDF NTV+ +TSNLG+D+I + R D M+ V +S +F+P + Sbjct: 790 SLSDGEGKEVDFANTVIFLTSNLGADIIADIAARGARPDPDAMRAAVRPALSRHFKPALL 849 Query: 755 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYE-IHISDEALKLLSENGYDPVYG 813 R+ E+ + PL +A IA+++L+R+ R+ + I D + ++ + G Sbjct: 850 ARMTEI-PYAPLAPDTLADIARLKLERIATRVAAQHATRIVYDDAVVAHVAARCTEVESG 908 Query: 814 ARPLKRAIQQQIENPLAQQIL--SGELVPGKVIRLEVNEDR 852 AR + +Q+ + LAQ +L +G P IR+ ++ Sbjct: 909 ARNVDFILQRHVLPALAQHVLVCAGNAAPMPAIRVAIDAGG 949 >UniRef50_C3KS27 Chaperone ClpB n=2 Tax=Clostridium botulinum RepID=C3KS27_CLOB6 Length = 746 Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats. Identities = 211/599 (35%), Positives = 329/599 (54%), Gaps = 20/599 (3%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +++L N+ + L++A+ +A+ ++ IE L + +V +L I+ L Sbjct: 1 MNKLNNELKQVLSEAKFIAIKFNHTRIEVEDFFIVLAKHKNSNVYKILRLLNIDVKDLIN 60 Query: 63 DINQA---LNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESR 119 ++ N + + + S L ++ A + I S+ +LA + Sbjct: 61 EVVSEYKDKNSIRYSQEMLDSIVASDSLKEIIMKASIEAINMKNELIESQHILLALSKED 120 Query: 120 GTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDP 179 TL +K G + I + + +++ N D+ L KY IDLT+ A + K + Sbjct: 121 STLGKKIKNKGIDESKILEGLSKIQFSNEKN--YNSDEESFLNKYAIDLTKCALENKFNM 178 Query: 180 VIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLA 239 V+GR++E+ I++L R++KNNPVLIGEPGVGKTAIVEGLA I+ G+VP+ LK +++ + Sbjct: 179 VLGREDELGYVIEILLRKSKNNPVLIGEPGVGKTAIVEGLACLIVQGKVPDELKNKKIYS 238 Query: 240 LDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNML 299 LD+GALVAG+K+RGEFEERLK V+ ++ G +ILFIDE+HT+VGAG DG MDA N+L Sbjct: 239 LDLGALVAGSKFRGEFEERLKKVITEIQNSYGQIILFIDEMHTLVGAGSTDGPMDASNLL 298 Query: 300 KPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYEL 359 KPALARGELHC+GATT+ EYR+YIEKD ALERRF+ V V EPS+E TI IL G+K YE Sbjct: 299 KPALARGELHCIGATTIKEYRKYIEKDPALERRFKTVLVEEPSIEKTIHILDGIKNIYED 358 Query: 360 HHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRI 419 +H+V+ AI AA TLS RYI++R LPDKAIDL+DEAA+ ++ + ++DR Sbjct: 359 YHNVKFNRSAIKAAVTLSSRYISERFLPDKAIDLLDEAAARKKI--------ISKVDRDN 410 Query: 420 IQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLS-GTQTIKAE 478 +E + ++ SK +++ L D+ R+ LE K + Q + Sbjct: 411 SSDVIEVKK-SDIAEIVSKWTKIPVSDLLEDEARKLRNLESHLKKRVIGQNKAVQAVSNA 469 Query: 479 LEQAKIAIEQARR-VGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIA 537 + ++++ + R+ +G + GK EL L A L ++R +++ + Sbjct: 470 VIRSRVCLSNPRKPIGSFIFLGPTGVGK-TELACNL--AKILFNDIDSVIRIDMSEYQDK 526 Query: 538 EVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNR 596 +LAR G P + E +L + + ++ +E ++ I + D R Sbjct: 527 SMLARLIGAPPGYVGYEEGGQLTEKVRCRPYSIVLLDE-IEKAHRDIVNIMLQILDDGR 584 Score = 359 bits (921), Expect = 3e-97, Method: Composition-based stats. Identities = 171/422 (40%), Positives = 260/422 (61%), Gaps = 8/422 (1%) Query: 432 ESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARR 491 E D A ++R + E E+ K +K K A+ + R Sbjct: 323 EKDPALERRFKTVLVEEPSIEKTI----HILDGIKNIYEDYHNVKFNRSAIKAAVTLSSR 378 Query: 492 VGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRM 551 + + + E + + ++++ + +V ++IAE++++WT IPVS + Sbjct: 379 YISERFLPDKAIDLLDEAAARKKIISKVDRDNSSDV-IEVKKSDIAEIVSKWTKIPVSDL 437 Query: 552 MESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGK 611 +E E KL +E L RVIGQN+AV AVSNA+ RSR L++P +PIGSF+FLGPTGVGK Sbjct: 438 LEDEARKLRNLESHLKKRVIGQNKAVQAVSNAVIRSRVCLSNPRKPIGSFIFLGPTGVGK 497 Query: 612 TELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPY 671 TEL LA +F+ ++++RIDMSE+ +K ++RL+GAPPGYVGYEEGG LTE VR RPY Sbjct: 498 TELACNLAKILFNDIDSVIRIDMSEYQDKSMLARLIGAPPGYVGYEEGGQLTEKVRCRPY 557 Query: 672 SVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGE 731 S++LLDE+EKAH D+ NI+LQ+LDDGR+TDGQGRT++FRNT++IMTSN+GS I E Sbjct: 558 SIVLLDEIEKAHRDIVNIMLQILDDGRVTDGQGRTINFRNTIIIMTSNIGSKDI---LKE 614 Query: 732 LDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGY 791 D + + + + F PEF+NRIDE ++F PL + + I +QL+ +L+ + Sbjct: 615 DDEEKLNQKIKKELIKEFSPEFLNRIDESIIFKPLSKDSLIKIISLQLREFIAQLQNKNI 674 Query: 792 EIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNED 851 +++I++ L+ + D +GARP++R+IQ +I P++++I+ G +V G I + N Sbjct: 675 KVNITENVKLLILDYLEDLQFGARPIRRSIQSKIITPISRKIVEGNIVEGDSILIFDNGK 734 Query: 852 RI 853 I Sbjct: 735 EI 736 >UniRef50_C1ASB5 Putative ATP-dependent Clp protease ATP-binding subunit n=1 Tax=Rhodococcus opacus B4 RepID=C1ASB5_RHOOB Length = 748 Score = 400 bits (1029), Expect = e-110, Method: Composition-based stats. Identities = 201/413 (48%), Positives = 267/413 (64%), Gaps = 15/413 (3%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 T + AL AQ+ ++ P H++ ALL+Q+ V P+ + G++A LR Sbjct: 5 FTTRALEALDWAQAQSIP---VATRPEHVLMALLDQDATIVEPVFEALGVDADDLRRSSP 61 Query: 66 QALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADI 125 R + D+ +L + A++ D+ +S E ++A R + + Sbjct: 62 SVTVR-RGAAASAAAPGIDADMASLLRAAEHEARQLSDHLVSIEHLLIALAGRRDGVGEA 120 Query: 126 LKAAGATTANITQAIEQMRGGESVNDQGAEDQR-----------QALKKYTIDLTERAEQ 174 L+AAGA +++ +A+ ++RG +V D E + +Y+ DLTE A + Sbjct: 121 LRAAGADRSSMLEAVRRVRGPAAVVDAEPERTYLGVRWRPPAVSSQVLRYSRDLTELAFR 180 Query: 175 GKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKG 234 +LDPV+GRD EI R IQVL RR KNNPVLIG+PGVGKTAI EGLAQRI+ G+VP L Sbjct: 181 AELDPVVGRDAEIERVIQVLSRRRKNNPVLIGDPGVGKTAIAEGLAQRIVAGDVPAALLN 240 Query: 235 RRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMD 294 RRV+ALD+GALVAGA YRGEFE+R+K +L D+ +G +I+FIDELHT+VGAG A+GA+D Sbjct: 241 RRVIALDVGALVAGATYRGEFEDRVKSLLKDVVGADGGIIVFIDELHTIVGAGAAEGAVD 300 Query: 295 AGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLK 354 AGN+LKP LARGE +GATTLDEYR+++E D ALERRFQ V V EPS + + +LRGL+ Sbjct: 301 AGNLLKPMLARGEFRTLGATTLDEYRKHVESDGALERRFQPVRVDEPSSANALEMLRGLR 360 Query: 355 ERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDS 407 RYE HH V ITD A+ AA +LS RYIADR LPDKAIDLIDEA S R+Q DS Sbjct: 361 SRYESHHGVAITDAALSAAVSLSDRYIADRFLPDKAIDLIDEACSRRRIQSDS 413 Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats. Identities = 167/418 (39%), Positives = 250/418 (59%), Gaps = 33/418 (7%) Query: 451 KERQYSELEEEWKAEKASLSGTQTIKAELEQA------KIAIEQARRVGDLARMSELQYG 504 ER++ + + + +L + +++ E A+ A + D Sbjct: 335 LERRFQPVRVDEPSSANALEMLRGLRSRYESHHGVAITDAALSAAVSLSDRYIADRFLPD 394 Query: 505 KIPELEKQLEAATQLEGKTMRLL--------RNKVTDAEIAEVLARWTGIPVSRMMESER 556 K +L + + +++ ++ + V D +IA ++ +WTGIPVSR+ E E Sbjct: 395 KAIDLIDEACSRRRIQSDSLSSVTRGAGSCTPPLVDDDDIARLVGQWTGIPVSRLQEEEL 454 Query: 557 EKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCK 616 E+L+ ME L RV+GQ +AV VS A+R SR GL+DPNRPI S +F GP GVGKT L + Sbjct: 455 ERLVHMEHRLAERVVGQAKAVVGVSAALRNSRTGLSDPNRPIASLMFCGPLGVGKTYLAR 514 Query: 617 ALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILL 676 LA+ M DS EA+V++DMS++ EKHSV+RLVGA PGYVGYEEGG LT+AVRRRPY V+LL Sbjct: 515 VLADVMLDSGEALVQLDMSDYAEKHSVTRLVGASPGYVGYEEGGQLTDAVRRRPYCVVLL 574 Query: 677 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAH 736 D++E+AHPDV +L QV+DDG LTDGQGR V FR+ +++MTS+L Sbjct: 575 DDIEQAHPDVHGLLRQVIDDGSLTDGQGRVVSFRHVILVMTSSLPD-------------- 620 Query: 737 MKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHIS 796 LG V+ +FR EF+ R+D+V+ F PL + + + IQ++ + RL +RG + ++ Sbjct: 621 -----LGAVNQHFRAEFLTRLDDVLEFAPLRRKDLEQLVDIQVRSVAARLSDRGIALELT 675 Query: 797 DEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIV 854 EA L++E G D GARPL R +Q+++ + +++ IL G+ PG IR++ + Sbjct: 676 HEARALIAELGDDSRQGARPLVRVVQKELISAVSRSILLGDACPGDTIRVDQEGTSVT 733 >UniRef50_A6Q1Y5 ATP-dependent Clp protease, ATP-binding subunit ClpA n=3 Tax=Epsilonproteobacteria RepID=A6Q1Y5_NITSB Length = 729 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 187/471 (39%), Positives = 273/471 (57%), Gaps = 9/471 (1%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 ++N+ +A A H ++++ H+ ALLN G + +L AG + ++ + Sbjct: 2 ISNQLNSIFKEAVKYAKRHRHEYLTVEHVFLALLNSPEG--AKILKEAGADIEIMKRKLI 59 Query: 66 QALNRL--PQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLA 123 Q L + P E + + L RV+ + Q + ++A + + + Sbjct: 60 QHLESVLKPLPENVVREPFETVALSRVIENMIRHIQNAEKKEATVGDLLVALFDEEHSYS 119 Query: 124 -DILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIG 182 +LK G + +I + + D+ L K+TIDL + A++GK+DPVIG Sbjct: 120 VYLLKEQGISKLDIMEIVSHQAEVVESKPSKKTDEESYLAKFTIDLLKEAKEGKIDPVIG 179 Query: 183 RDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDM 242 RD+EI R +Q+L RR KNNP+L+GEPGVGKTAI EGLA +I GE+P+ L+G + +LDM Sbjct: 180 RDKEIERVMQILCRRKKNNPLLVGEPGVGKTAIAEGLALKIAAGEIPDVLEGASLYSLDM 239 Query: 243 GALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKAD-GAMDAGNMLKP 301 GAL+AG KYRG+FE+RLKGV+ +L K N ILFIDE+HT+VGAG G+MDA NMLKP Sbjct: 240 GALLAGTKYRGDFEKRLKGVVEEL-KSIPNAILFIDEIHTIVGAGATQGGSMDASNMLKP 298 Query: 302 ALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHH 361 ALA G + C+GATT E+R ++EKD AL RRF KV V EP +E T IL+GLK++YE HH Sbjct: 299 ALASGAIKCIGATTYAEFRNFLEKDRALSRRFAKVDVKEPDLETTFKILKGLKDKYEKHH 358 Query: 362 HVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEEL-DRLDRRII 420 V+ A+ +A LS +YI DRQLPDKAIDLIDE +S ++ + + ++ I Sbjct: 359 KVRYHINALRSAVELSDKYINDRQLPDKAIDLIDEVGASFHLRKKRRSVVTVNDIEDTIA 418 Query: 421 QLK-LEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLS 470 ++ L Q + + E K + L E + +E +L K +A L+ Sbjct: 419 KMVGLPPQRVTSDDLEILKNLEEKLKERVLGQEEAVEQLAMAIKRSRAGLN 469 Score = 356 bits (914), Expect = 2e-96, Method: Composition-based stats. Identities = 182/583 (31%), Positives = 284/583 (48%), Gaps = 46/583 (7%) Query: 302 ALARGELHCVGATTLDEYRQYIEKDAALERRFQ---------KVFVAEPSVEDTIAILRG 352 LA+ + + + I +D +ER Q + V EP V T AI G Sbjct: 157 YLAKFTIDLLKEAKEGKIDPVIGRDKEIERVMQILCRRKKNNPLLVGEPGVGKT-AIAEG 215 Query: 353 LKERYELHHHVQITDPAIVAAATLSH-----RY-----------------IADRQLPDKA 390 L + + + A + + + +Y I + L Sbjct: 216 LALKIAAGEIPDVLEGASLYSLDMGALLAGTKYRGDFEKRLKGVVEELKSIPNAILFIDE 275 Query: 391 IDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSD 450 I I A ++ +D+ L I+ + + L ++ Sbjct: 276 IHTIVGAGATQGGSMDASNMLKPALASGAIKCIGATTYAEFRNFLEKDRALSRRFAKVDV 335 Query: 451 KERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELE 510 KE + K K ++ + + A+E + + + ++ + I E+ Sbjct: 336 KEPDLETTFKILKGLKDKYEKHHKVRYHINALRSAVELSDKYINDRQLPDKAIDLIDEVG 395 Query: 511 KQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRV 570 + R+ VT +I + +A+ G+P R+ + E L +E++L RV Sbjct: 396 ASFHLRKKR--------RSVVTVNDIEDTIAKMVGLPPQRVTSDDLEILKNLEEKLKERV 447 Query: 571 IGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMV 630 +GQ EAV+ ++ AI+RSRAGL PN+PIGSFLF+GPTGVGKTEL K LA M Sbjct: 448 LGQEEAVEQLAMAIKRSRAGLNPPNKPIGSFLFVGPTGVGKTELAKELARTM---GVHFE 504 Query: 631 RIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNIL 690 R DMSE+MEKH+VSRL+GAPPGY+GYEEGG LTE +R+ PY+V+LLDE+EKAHPD+ NIL Sbjct: 505 RFDMSEYMEKHAVSRLIGAPPGYIGYEEGGLLTETIRKHPYTVLLLDEIEKAHPDLINIL 564 Query: 691 LQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFR 750 LQV+D+ LTD G DF++ V+IMTSN+G+ + + F Sbjct: 565 LQVMDNATLTDNNGNVADFKHVVLIMTSNVGATEANVMGFK---QESVSKFDEALKQYFT 621 Query: 751 PEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDP 810 PEF NR+D +V F PL ++ + I + L +L+ + + ++ +A K L++ GY P Sbjct: 622 PEFRNRLDAIVRFRPLSQEIVEGIVDKFIAELNDQLDNKSITLSLTPKAKKYLAQKGYSP 681 Query: 811 VYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRI 853 GARPL R I ++I+ PL +IL G+L G ++++ + ++ Sbjct: 682 ELGARPLARVISEEIKTPLTNEILFGKLRHGGKVKIDEKKGKL 724 >UniRef50_A4FG52 Clp protease ATP binding subunit n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FG52_SACEN Length = 768 Score = 391 bits (1004), Expect = e-107, Method: Composition-based stats. Identities = 173/327 (52%), Positives = 240/327 (73%), Gaps = 2/327 (0%) Query: 528 RNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRS 587 + V ++A+V++R TGIPVS + +++++LL +E+ L +VIGQ+ AV +V+ A+RR+ Sbjct: 420 QPSVGRDDVADVVSRRTGIPVSDLTAADKQRLLGLEKVLRSKVIGQDAAVRSVAEAVRRA 479 Query: 588 RAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLV 647 RAGLADP RPIGSFLFLGPTGVGKTEL +ALA +F + ++R DM EF EKH+VSRL+ Sbjct: 480 RAGLADPERPIGSFLFLGPTGVGKTELARALARALFGDAQRLIRFDMGEFQEKHTVSRLI 539 Query: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTV 707 GAPPGYVGY E G LT+ VRR+PYSV+LLDEVEKAHPDVFN LLQ+LD+GRL+D QGR+V Sbjct: 540 GAPPGYVGYGESGQLTDRVRRQPYSVLLLDEVEKAHPDVFNTLLQLLDEGRLSDAQGRSV 599 Query: 708 DFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLG 767 DFRN VVIMTSN+G+D I + G + + +L + FRPEFINRID+V VF PLG Sbjct: 600 DFRNVVVIMTSNIGADRILDAGGSAGDSAL--ELLEELRSFFRPEFINRIDDVTVFQPLG 657 Query: 768 EQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIEN 827 + I + L+R Y++L RG + +++ A+ L+E G+ P +GARPL+R IQ++++N Sbjct: 658 PAALREITGLLLERTYQQLLARGIGMEVTEAAVAWLAERGHQPEFGARPLRRVIQRELDN 717 Query: 828 PLAQQILSGELVPGKVIRLEVNEDRIV 854 LA ++ GEL G + ++ + +V Sbjct: 718 RLAAMVIDGELSSGHRVLVDAVGEDLV 744 Score = 381 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 200/560 (35%), Positives = 305/560 (54%), Gaps = 28/560 (5%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 L + ++ A + ++ ++ HL+ A+ + G + +L +G+ +L + + Sbjct: 17 LDEQAHEVVSKAIRATVEWGSRELDSAHLLWAVT--QVGPTARMLGDSGVRVEELASAVR 74 Query: 66 QALNRLPQVEGTG-GDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLAD 124 + G G S R L + A G + + + +L ++A Sbjct: 75 TVAGTYDALGGQAQGKPVLSSSARRALLGAHQQALSEGADAVGARHVLLGLATDADSVAG 134 Query: 125 ILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRD 184 + +A+E+ L ++ +D+TE A G+LDPV+GR Sbjct: 135 ---------RALARAMERSERTRPNARPSVLSTTPKLDEFGMDMTELARAGRLDPVVGRS 185 Query: 185 EEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGA 244 +E+ + ++VL RRTKNNPV IG+PGVGKTAIVEGLAQRI++G VP L GRRV++LD+ Sbjct: 186 QEVEQAVEVLGRRTKNNPVFIGDPGVGKTAIVEGLAQRIVDGAVPWSLAGRRVVSLDLAG 245 Query: 245 LVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALA 304 +VAGAKYRGEFE+R + ++N++ + V++FIDE+H +VGAG +G MDAG MLKPALA Sbjct: 246 MVAGAKYRGEFEQRFRDLMNEIRQHRDEVLVFIDEIHGIVGAGAGEGTMDAGTMLKPALA 305 Query: 305 RGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQ 364 RGE+ VGATT++EYR++IEKD ALERRFQ + VAEPSV DT+A+LRGL++RY+LHH V Sbjct: 306 RGEVQVVGATTVEEYRKHIEKDPALERRFQPILVAEPSVGDTVAVLRGLRDRYQLHHRVV 365 Query: 365 ITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKL 424 I D A+VAAA LS RYIADR LPDKA+DL+D+A S +R+ P + Sbjct: 366 IADDALVAAARLSQRYIADRFLPDKAVDLLDQACSRVRLLRGGSPNDPGS--------SA 417 Query: 425 EQQALMKESDEAS----KKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELE 480 E Q + D A + + + + +DK+R + + +++ + Sbjct: 418 EHQPSVGRDDVADVVSRRTGIPVSDLTAADKQRLLGLEKVLRSKVIGQDAAVRSVAEAVR 477 Query: 481 QAKIAIEQARR-VGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEV 539 +A+ + R +G + GK EL + L A L G RL+R + + + Sbjct: 478 RARAGLADPERPIGSFLFLGPTGVGK-TELARAL--ARALFGDAQRLIRFDMGEFQEKHT 534 Query: 540 LARWTGIPVSRMMESEREKL 559 ++R G P + E +L Sbjct: 535 VSRLIGAPPGYVGYGESGQL 554 >UniRef50_Q6ETV8 Putative uncharacterized protein n=4 Tax=Poaceae RepID=Q6ETV8_ORYSJ Length = 822 Score = 390 bits (1003), Expect = e-107, Method: Composition-based stats. Identities = 160/323 (49%), Positives = 230/323 (71%), Gaps = 1/323 (0%) Query: 531 VTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590 V +A+V++RWTGIPV+ + + E+EKL+ + LH RV+GQ+EAV V+ A+ RSRAG Sbjct: 452 VGPDHVAQVVSRWTGIPVTTLDQEEKEKLIHLADRLHERVVGQDEAVKLVAQAVLRSRAG 511 Query: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAP 650 L P +PIGSFLFLG TGVGKTEL KALA +FDS++ ++R DMSEF+ SV RL+GAP Sbjct: 512 LEQPGQPIGSFLFLGSTGVGKTELAKALAEQLFDSEKMLIRFDMSEFVGSGSVLRLIGAP 571 Query: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFR 710 P Y G+++GG LTE VR RPYSVIL DEVEKA P VFN+ LQ+LDDG LTDG+GRTVDF+ Sbjct: 572 PSYHGHQDGGQLTEKVRTRPYSVILFDEVEKADPSVFNVFLQLLDDGMLTDGKGRTVDFK 631 Query: 711 NTVVIMTSNLGSDLIQERF-GELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQ 769 NT++IMTSNLG++ + E GE ++LV+ V FRPE +NR+ E+V+F PL Sbjct: 632 NTIIIMTSNLGAEHLTEGVTGERTMEAARDLVMKQVQKYFRPELLNRLSEIVIFEPLSHD 691 Query: 770 HIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPL 829 ++ + +IQ+K + + +G + SD+AL ++ Y+P+YGARP++R +Q+ + L Sbjct: 692 NLKEVVKIQMKSVVTSVAHKGVSLLASDDALDVILSESYNPMYGARPVRRWVQKNVMTKL 751 Query: 830 AQQILSGELVPGKVIRLEVNEDR 852 ++ +++G+ G I ++ +D+ Sbjct: 752 SEMLITGDAGQGSTISIDATDDK 774 Score = 326 bits (835), Expect = 3e-87, Method: Composition-based stats. Identities = 153/260 (58%), Positives = 193/260 (74%), Gaps = 3/260 (1%) Query: 151 DQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGV 210 A + AL+ Y D+T A DPVIGRD+E+ R + +L RRTKN+ VL+G PGV Sbjct: 171 KPVAPPKETALRTYGRDMTGSAAAA--DPVIGRDDEVDRVVCILCRRTKNSAVLVGAPGV 228 Query: 211 GKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQE 270 GKTAI EGLA+R+ G+VP L G RV+ LD+G+LVAG +YRG FEER+K V+ + Sbjct: 229 GKTAIAEGLARRVAAGDVPAALAGARVVELDVGSLVAGTQYRGMFEERVKKVIQEAEGAA 288 Query: 271 GNVILFIDELHTMVGAGKADG-AMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAAL 329 G VILFIDE+H ++GAG G +MD N+LKPALARG + CVGATT DEYR++IE+DAA Sbjct: 289 GKVILFIDEMHMLLGAGACKGGSMDGANLLKPALARGRIRCVGATTFDEYRKHIERDAAF 348 Query: 330 ERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDK 389 ERRFQKV V EP+ + TIAIL+GLK+RYE HH ++I D AIVAAA L+ RYI RQ PDK Sbjct: 349 ERRFQKVIVEEPTTQATIAILQGLKQRYEEHHGLKIQDAAIVAAAQLADRYITGRQFPDK 408 Query: 390 AIDLIDEAASSIRMQIDSKP 409 AIDLIDEA S++R++IDS+ Sbjct: 409 AIDLIDEACSTVRLKIDSQK 428 >UniRef50_A9AYE5 ATPase AAA-2 domain protein n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AYE5_HERA2 Length = 776 Score = 387 bits (994), Expect = e-105, Method: Composition-based stats. Identities = 175/403 (43%), Positives = 246/403 (61%), Gaps = 7/403 (1%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +RL Q + AQ A ++ F+ P HL+ LL Q+ G +L G+ Q R Sbjct: 5 FERLNPNIQHIMLLAQEEARSLNHSFLGPEHLLLGLLRQKEGLAVQILHELGVFYPQTRQ 64 Query: 63 DINQALNRLPQVEGT--GGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL-ESR 119 I + + E T + + +L+ + A + I E +LA E++ Sbjct: 65 IIQTMITPHARDEQTLLPAYLPLAPHTKTLLDTAAREADQLNQQQIGPEQLLLALAREAK 124 Query: 120 GTLADILKAAGATTANITQAIEQMRGGESVNDQGAED-QRQALKKYTIDLTERAEQGKLD 178 G + IL G + + ++ ++ A L K I+LTE A G+LD Sbjct: 125 GFVPYILARLGLHGSIVCDSLHAALQAKATEVAPAHAADTSLLAKLGINLTEEARNGRLD 184 Query: 179 PVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVL 238 PVIGR EI RTIQ+L+RRTKNN VLIGEPGVGKTAIVEGLAQ++ +G +P + V Sbjct: 185 PVIGRSAEIERTIQILRRRTKNNVVLIGEPGVGKTAIVEGLAQQLAHGAIP-SFQKTSVW 243 Query: 239 ALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNM 298 +LD+G+L+AGA YRG+FEERLK V++ ++ + ILFIDELH +VGAG ++ +DA NM Sbjct: 244 SLDVGSLLAGAIYRGQFEERLKSVIDQISDHDA--ILFIDELHMIVGAGASENTVDAANM 301 Query: 299 LKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYE 358 LKPALARG+L +GATT DEY Q+IEKD+AL+RRFQ + V EP +E+T+ IL+G++ +YE Sbjct: 302 LKPALARGKLRVIGATTFDEYSQHIEKDSALKRRFQPIVVQEPGIEETVTILQGIRPKYE 361 Query: 359 LHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSI 401 HH + ++D A+ AA L+ +YI D LP KAIDL+DEAAS + Sbjct: 362 AHHELSLSDEALYTAARLAAQYIPDLYLPGKAIDLLDEAASRV 404 Score = 317 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 144/432 (33%), Positives = 248/432 (57%), Gaps = 14/432 (3%) Query: 432 ESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARR 491 E D A K+R + + E + L+ +A + + +A A++A + Sbjct: 327 EKDSALKRRFQPIVVQEPGIEETVTILQGIRPKYEAHHELSLSDEALYTAARLAAQYIPD 386 Query: 492 VGDLARMSELQYGKIPELE--KQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVS 549 + + +L + +Q + + V ++A+VLA TGIP++ Sbjct: 387 LYLPGKAIDLLDEAASRVWYYRQRQLVAHDAASSAEAPTTVVCGRDVAQVLAIQTGIPLA 446 Query: 550 RMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGV 609 ++ ++ +EQ L RVIGQ +A+ V+ AI+R+ AGL IG+ LFLGP+GV Sbjct: 447 QLFSDGLNRIEDIEQILSQRVIGQAQAIRGVTKAIQRAFAGLKTKQDLIGALLFLGPSGV 506 Query: 610 GKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRR 669 GKTEL K LA ++ S++A++R+DMSE+ E HSVSRL+GAPPGY+GY++GG L+E+VRRR Sbjct: 507 GKTELSKVLAEYLLGSNKALIRMDMSEYAEAHSVSRLIGAPPGYIGYDQGGQLSESVRRR 566 Query: 670 PYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERF 729 PYSV+LLD ++ AHPDV NI +Q+L++G +TD +GR VDFRN +++ T+N+G++L + + Sbjct: 567 PYSVVLLDNIDYAHPDVINIFIQILEEGSITDARGRYVDFRNVLLLCTANVGTELFKRQT 626 Query: 730 G------------ELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQI 777 G Y H+K+ L + + +F++R+++V++F PL +H+ +A + Sbjct: 627 GLGFRAELPEIDQVARYEHLKQQALDKIKTSLSLDFLHRLNDVILFQPLQAEHLEVLAGL 686 Query: 778 QLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGE 837 L+ + + + + ++ A L+++GYD G R L+ IQ I +P++ +L G+ Sbjct: 687 FLQDVRQMVLAHEIRLDLTSNAHTYLTDHGYDLERGVRRLRHLIQTHIVDPISNGLLHGK 746 Query: 838 LVPGKVIRLEVN 849 G + ++ + Sbjct: 747 YRAGDELLIDCD 758 >UniRef50_A3CMZ1 ATPases with chaperone activity, ATP-binding subunit, putative n=1 Tax=Streptococcus sanguinis SK36 RepID=A3CMZ1_STRSV Length = 747 Score = 387 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 232/780 (29%), Positives = 389/780 (49%), Gaps = 50/780 (6%) Query: 82 QPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAGATTANITQAIE 141 + L VLN +LA ++ + + + + + I Sbjct: 4 HYTNLLQEVLNAAKELAIQKHNYQVDIPHVWTVLTQPQAFALEFYTGLDLDINEFISVIN 63 Query: 142 QMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQR-RTKN 200 Q V ++ ++Y+ L + + + RDE + +L + Sbjct: 64 QELAKIPVFSHTDTNRYG--RQYSQRLKNLLDDAEAERAELRDEVVTVEHLILSLFHQQR 121 Query: 201 NPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDM-GALVAGAKYRGEFEERL 259 NP+ + K A G+ + ++ ++ + +G+R ++ A +KY F + L Sbjct: 122 NPITV----FLKQA---GIDKELVAAKLNKARQGKRAISPSQESRYQALSKYATNFNQWL 174 Query: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319 + + VI DE+ ++ +A +L G+ + Sbjct: 175 ------ADQTDRQVIGRKDEIDDIIRVLCRKEKSNA--ILLGFPGVGKSKVI----EGVV 222 Query: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQ-ITDPAIVAAATLSH 378 + + D + + E + ++ G K R E + + D +VA Sbjct: 223 GRLLADDVP-----EHLLGKEVFKLNLGGLIAGTKYRGEFEERFKAVLDEVLVAK----- 272 Query: 379 RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASK 438 K I I++ + + L + ++ Q ++ + A+ Sbjct: 273 ---------GKIILYIEDIHQIVTAGRTEGSLDAGNLLKPLLAQG--QINIIGTTTFAAY 321 Query: 439 KRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLA-- 496 + L++ L + ++ E + A L G + + ++ E + L+ Sbjct: 322 RESFELDQALEGRFQRVRIEEPDQDKALAILQGLRENYQDFHGVRLTDEALQAAISLSIR 381 Query: 497 -RMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESE 555 K +L + A +++ + R V+ +IA ++ R TGI V +M++E Sbjct: 382 YLSDRYLPDKALDLIDEACAVKKIQLGQAQTERPDVSREDIASIVERITGIKVQGIMDNE 441 Query: 556 REKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELC 615 RE LL +++ L R++GQ++AV VS AI RSRAG+ +P RPIGSFLFLGPTGVGKT L Sbjct: 442 REHLLNLDKLLRQRIVGQDQAVQKVSEAILRSRAGIQNPKRPIGSFLFLGPTGVGKTALA 501 Query: 616 KALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVIL 675 KALA +F ++ MVR+DMSE+MEKH+V+RLVG PPGYVG+EEGG LTEAVRRR YS++L Sbjct: 502 KALAERLFGNELEMVRLDMSEYMEKHAVARLVGPPPGYVGFEEGGQLTEAVRRRLYSIVL 561 Query: 676 LDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD-- 733 LDE+EKAHPDVFN LLQVLD+GRLTD +GRT+DF+NT++IMTSN+GS I E Sbjct: 562 LDEIEKAHPDVFNTLLQVLDEGRLTDSKGRTIDFKNTILIMTSNIGSQQILESLKSEQGL 621 Query: 734 YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 793 A +E VL ++ H+F+PEF+NRIDE VVF+PL + + +I +I +++L +RLE + ++ Sbjct: 622 TAETQEEVLSLLQHSFKPEFLNRIDETVVFNPLRAEDMINIVKIMVRQLQERLEHQKIQL 681 Query: 794 HISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRI 853 H+S+E L++ GY P +GARP++R+I + +E PLA+ ++ + +++ + + ++ Sbjct: 682 HLSEEVYAFLAQKGYQPEFGARPIQRSIMRYLETPLARYLVENKETTEMTVQVSLKDGQL 741 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 179/573 (31%), Positives = 300/573 (52%), Gaps = 20/573 (3%) Query: 4 DRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTD 63 + TN Q L A+ LA+ N ++ H+ + L Q T ++ + + Sbjct: 3 EHYTNLLQEVLNAAKELAIQKHNYQVDIPHVWTVL-TQPQAFALEFYTGLDLDINEFISV 61 Query: 64 INQALNRLPQVEGTGGDV---QPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL-ESR 119 INQ L ++P T + Q SQ L +L+ + + D ++ E +L+ + R Sbjct: 62 INQELAKIPVFSHTDTNRYGRQYSQRLKNLLDDAEAERAELRDEVVTVEHLILSLFHQQR 121 Query: 120 GTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDP 179 + LK AG + + + R G+ E + QAL KY + + Sbjct: 122 NPITVFLKQAGIDKELVAAKLNKARQGKRAISPSQESRYQALSKYATNFNQWLADQTDRQ 181 Query: 180 VIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLA 239 VIGR +EI I+VL R+ K+N +L+G PGVGK+ ++EG+ R++ +VPE L G+ V Sbjct: 182 VIGRKDEIDDIIRVLCRKEKSNAILLGFPGVGKSKVIEGVVGRLLADDVPEHLLGKEVFK 241 Query: 240 LDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNML 299 L++G L+AG KYRGEFEER K VL+++ +G +IL+I+++H +V AG+ +G++DAGN+L Sbjct: 242 LNLGGLIAGTKYRGEFEERFKAVLDEVLVAKGKIILYIEDIHQIVTAGRTEGSLDAGNLL 301 Query: 300 KPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYEL 359 KP LA+G+++ +G TT YR+ E D ALE RFQ+V + EP + +AIL+GL+E Y+ Sbjct: 302 KPLLAQGQINIIGTTTFAAYRESFELDQALEGRFQRVRIEEPDQDKALAILQGLRENYQD 361 Query: 360 HHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRI 419 H V++TD A+ AA +LS RY++DR LPDKA+DLIDEA + ++Q+ E + R Sbjct: 362 FHGVRLTDEALQAAISLSIRYLSDRYLPDKALDLIDEACAVKKIQLGQAQTERPDVSRED 421 Query: 420 IQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAEL 479 I +E+ +K +R +LN + ++R + + Q + + Sbjct: 422 IASIVERITGIKVQGIMDNEREHLLNLDKLLRQRIVGQDQ-----------AVQKVSEAI 470 Query: 480 EQAKIAIEQARR-VGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAE 538 +++ I+ +R +G + GK L K L A +L G + ++R +++ Sbjct: 471 LRSRAGIQNPKRPIGSFLFLGPTGVGK-TALAKAL--AERLFGNELEMVRLDMSEYMEKH 527 Query: 539 VLARWTGIPVSRMMESEREKLLRMEQELHHRVI 571 +AR G P + E +L + + ++ Sbjct: 528 AVARLVGPPPGYVGFEEGGQLTEAVRRRLYSIV 560 >UniRef50_Q7XL03 OJ000315_02.14 protein n=2 Tax=Oryza sativa Japonica Group RepID=Q7XL03_ORYSJ Length = 877 Score = 384 bits (987), Expect = e-105, Method: Composition-based stats. Identities = 176/466 (37%), Positives = 251/466 (53%), Gaps = 57/466 (12%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +R T + A+ +Q A G ++ + P HL+ L+ ++ + ++G+ + R Sbjct: 71 FERFTERAVKAVVFSQREARGMGDETVAPHHLLLGLVAEDRSPLG--FLASGVRVERARE 128 Query: 63 DINQALNRLPQVEGTGG---DVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALE-S 118 A+ + + G DV S RV + ++ G NFIS E L + Sbjct: 129 ACRAAVGKEGLAQAPVGLATDVPFSGASKRVFEAAVEFSRNMGCNFISPEHIALGLFNLN 188 Query: 119 RGTLADILKAAGATTANITQAIEQMRGGESVND--------------------------- 151 T ++LK+ G ++ + + GE D Sbjct: 189 DPTTNNVLKSLGVDSSQLAKQALTRVQGELAKDGREPVGLSSFKVREKFTPGGGKSAIVK 248 Query: 152 -QGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGV 210 ++ AL + +DLT RA G +DPVIGR +EI R +Q++ RRTKNNP+L+GE GV Sbjct: 249 YSNKNKEKSALALFCLDLTMRASGGLIDPVIGRKDEIERVVQIICRRTKNNPILLGEAGV 308 Query: 211 GKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQE 270 GKTAI EGLA +I NG+VP L G+R+L+LD+ L+AGAK RGE E R+ ++ ++ K + Sbjct: 309 GKTAIAEGLAHKIANGDVPIFLVGKRILSLDVALLMAGAKERGELEARVTSLIREVRKAD 368 Query: 271 ------------------GNVILFIDELHTMVGAG-----KADGAMDAGNMLKPALARGE 307 G+VILFIDE+HT++G+G +D N+LKPALARGE Sbjct: 369 PKLPFLVFNLQRAPKFHAGDVILFIDEVHTLIGSGIAGRGSKGAGLDIANLLKPALARGE 428 Query: 308 LHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITD 367 L C+ +TTLDE+R + +KD AL RRFQ V V EPS ED + IL GL+E+YE +H + T Sbjct: 429 LQCIASTTLDEHRLHFDKDKALARRFQPVLVNEPSQEDAVKILLGLREKYETYHKCKYTL 488 Query: 368 PAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELD 413 +I AA LS RYIADR LPDKAIDLIDEA S RM+ + +E Sbjct: 489 ESINAAVYLSARYIADRHLPDKAIDLIDEAGSRARMESFKRKKEEQ 534 Score = 261 bits (667), Expect = 7e-68, Method: Composition-based stats. Identities = 123/272 (45%), Positives = 171/272 (62%), Gaps = 31/272 (11%) Query: 608 GVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVR 667 G KT L+ D A VR+DMSE+ME+H+VS+L+G+PPGY+G+ EGG LTEAVR Sbjct: 583 GEDKTSPASMLSTS-TDKKSATVRLDMSEYMERHAVSKLIGSPPGYMGFGEGGTLTEAVR 641 Query: 668 RRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE 727 R+P++V+LLDE+EKAHPD+FNILLQ+ +DG LTD QGR V F+NT+++MTSN+GS I Sbjct: 642 RKPFTVVLLDEIEKAHPDIFNILLQIFEDGHLTDSQGRRVSFKNTLIVMTSNVGSTSISN 701 Query: 728 -----------RFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGE-------- 768 E YA MK LV+ + FRPE +NRIDEVVVFHPL + Sbjct: 702 GKRSIGFQTQTDTEEKSYAAMKSLVMEELKAFFRPELLNRIDEVVVFHPLEKTQACCFYR 761 Query: 769 -----------QHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPL 817 + +I I L+ + R+ G + +SD L+S++GYD YGARPL Sbjct: 762 YCTCILPCTFVNTMLAILNIMLQEVKGRILALGIGLEVSDSMKDLISQHGYDKSYGARPL 821 Query: 818 KRAIQQQIENPLAQQILSGELVPGKVIRLEVN 849 +RA+ Q +E+ +++ ILSG+ PG I ++ + Sbjct: 822 RRAVTQLVEDVISEAILSGQFKPGDTIMVDTD 853 >UniRef50_Q0E0M6 Os02g0537400 protein n=2 Tax=Poaceae RepID=Q0E0M6_ORYSJ Length = 388 Score = 384 bits (987), Expect = e-105, Method: Composition-based stats. Identities = 160/323 (49%), Positives = 230/323 (71%), Gaps = 1/323 (0%) Query: 531 VTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590 V +A+V++RWTGIPV+ + + E+EKL+ + LH RV+GQ+EAV V+ A+ RSRAG Sbjct: 18 VGPDHVAQVVSRWTGIPVTTLDQEEKEKLIHLADRLHERVVGQDEAVKLVAQAVLRSRAG 77 Query: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAP 650 L P +PIGSFLFLG TGVGKTEL KALA +FDS++ ++R DMSEF+ SV RL+GAP Sbjct: 78 LEQPGQPIGSFLFLGSTGVGKTELAKALAEQLFDSEKMLIRFDMSEFVGSGSVLRLIGAP 137 Query: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFR 710 P Y G+++GG LTE VR RPYSVIL DEVEKA P VFN+ LQ+LDDG LTDG+GRTVDF+ Sbjct: 138 PSYHGHQDGGQLTEKVRTRPYSVILFDEVEKADPSVFNVFLQLLDDGMLTDGKGRTVDFK 197 Query: 711 NTVVIMTSNLGSDLIQERF-GELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQ 769 NT++IMTSNLG++ + E GE ++LV+ V FRPE +NR+ E+V+F PL Sbjct: 198 NTIIIMTSNLGAEHLTEGVTGERTMEAARDLVMKQVQKYFRPELLNRLSEIVIFEPLSHD 257 Query: 770 HIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPL 829 ++ + +IQ+K + + +G + SD+AL ++ Y+P+YGARP++R +Q+ + L Sbjct: 258 NLKEVVKIQMKSVVTSVAHKGVSLLASDDALDVILSESYNPMYGARPVRRWVQKNVMTKL 317 Query: 830 AQQILSGELVPGKVIRLEVNEDR 852 ++ +++G+ G I ++ +D+ Sbjct: 318 SEMLITGDAGQGSTISIDATDDK 340 >UniRef50_B3ERL7 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ERL7_AMOA5 Length = 573 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 191/504 (37%), Positives = 289/504 (57%), Gaps = 34/504 (6%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M ++ LT+K + +A ++ AL + I PLH++ +L E +L + GI +L Sbjct: 1 MPIN-LTHKAKEIIALSRKEALKLHSNSIRPLHILLGILQYESCLAYKILFALGIPMEEL 59 Query: 61 RTDINQALNRLPQVE----GTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL 116 R + ++ + + + G ++ + ++ +L L + A+ I +E +LAAL Sbjct: 60 RIALEKSEQQEHEEDMIDNGQVNGIKLTHEIESLLKLTQQYAKALKSEAIGTEHILLAAL 119 Query: 117 ESRGTLAD-ILKAAGATTANITQAIEQMRGGESVNDQGAEDQR----------------- 158 ++ IL T I + I G + Q E+ R Sbjct: 120 KNADVHTKYILDQFNVTYEAIERVIVHRLGQYYIVAQEMEESRDDASENMDDSEDSTTSK 179 Query: 159 ---------QALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPG 209 L ++ DL++ AE+GKLDP+IGR +EI R Q+L RR KNN +LIGEPG Sbjct: 180 HKDIEKTRTPILDNFSRDLSKLAEEGKLDPIIGRKKEIERVAQILSRRRKNNALLIGEPG 239 Query: 210 VGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQ 269 VGKTAI EGLA +I+ G+V + L G+RV++LD+ ALVAG KYRG+FEER+K ++N+L K Sbjct: 240 VGKTAIAEGLALQIMQGKVAKPLLGKRVVSLDVAALVAGTKYRGQFEERIKAIMNELVKS 299 Query: 270 EGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAAL 329 + VILFIDELHT+VGAG A G++DA N+LKPALARG++ C+GATTL EYRQYIEKD AL Sbjct: 300 K-QVILFIDELHTIVGAGSAAGSLDAANILKPALARGDIQCIGATTLSEYRQYIEKDGAL 358 Query: 330 ERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDK 389 RRFQ V V ++ ++I IL LK+ YE +H V T I A L+ RYI++R LPDK Sbjct: 359 TRRFQSVRVEPTTIVESIEILNNLKDTYEEYHSVTYTPEVIKACVDLADRYISNRLLPDK 418 Query: 390 AIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELS 449 AID++DE +S+ M P ++ +L I +K + ++ +L ++L Sbjct: 419 AIDVMDEVGASVHMHNIQVPSKIAKLADNIELIKANKNKAVRNQKYEEAAQLRDQEKKLY 478 Query: 450 DK-ERQYSELEEEWKAEKASLSGT 472 +K E + ++ E+E K+++ ++ Sbjct: 479 EKFELEKTKWEQELKSKRYPITTL 502 >UniRef50_UPI000198575F PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera RepID=UPI000198575F Length = 923 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 177/403 (43%), Positives = 252/403 (62%), Gaps = 13/403 (3%) Query: 458 LEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAAT 517 + + L KA +E K E+ V L + + + +I ++ E Sbjct: 497 PDRRLPDKAIDLIDEAGSKARMEAYKRKKEKQTSV--LLKSPDDYWQEIRAVKAMHEMMI 554 Query: 518 QLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAV 577 + ++ V EIA V + W+GIPV ++ ER L+ + ++L RV+GQ+ A+ Sbjct: 555 MSMTLSPWIIPIVVGPNEIAVVASLWSGIPVQQITADERMLLVGLHEQLRKRVVGQDNAI 614 Query: 578 DAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEF 637 ++S A++RSR GL DPNRPI + LF GPTGVGKTEL KALA F S+ AMVR+DMSE+ Sbjct: 615 ASISRAVKRSRVGLKDPNRPIAAMLFCGPTGVGKTELAKALAACYFGSEAAMVRLDMSEY 674 Query: 638 MEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDG 697 ME+HSVS+L+G+PPGYVGY EGG LTEA+RR+P++V+LLDE+EKAHPD+FNILLQ+ +DG Sbjct: 675 MEQHSVSKLIGSPPGYVGYGEGGTLTEAIRRQPFTVVLLDEIEKAHPDIFNILLQMFEDG 734 Query: 698 RLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGEL-----------DYAHMKELVLGVVS 746 LTD QGR V FRN +V+MTSN+GS I + YA MK LV+ + Sbjct: 735 HLTDSQGRRVLFRNALVVMTSNVGSAAIAKGRQSSIGFSIADDEPTSYAGMKALVMEELK 794 Query: 747 HNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSEN 806 FRPE +NR+DE+VVFHPL + + I L+ + +RL G + +S + LL + Sbjct: 795 AYFRPELLNRLDEIVVFHPLEKAQMLEILNTMLQEVKERLSSLGIGMEVSVSVIDLLCQQ 854 Query: 807 GYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVN 849 GYD YGARPL+RA+ IE+PL++ +L+ E PG + ++++ Sbjct: 855 GYDKNYGARPLRRAVTLIIEDPLSEALLTEEYQPGDIAVVDLD 897 Score = 369 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 166/455 (36%), Positives = 232/455 (50%), Gaps = 46/455 (10%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +R T + A+ +Q A + HL+ L+ ++ +GI R Sbjct: 78 FERFTERAIKAVIFSQREAKALGRNMVFTQHLLLGLVAEDRSL--DGFLGSGITIDDARD 135 Query: 63 DINQA------------LNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSEL 110 + + + DV S RV + ++ G NFI+ E Sbjct: 136 AVRSIWHDYNDSSIISGIPSSQTSVASSTDVPFSISTKRVFEAAIEYSRTMGYNFIAPEH 195 Query: 111 FVLAALE-SRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQR----------- 158 + G+ +LK GA ++ GE D Sbjct: 196 IAIGLFTVDDGSAGRVLKRLGANVNHLAAVAVSRLQGELAKDGSEPSATFKGMQGKSFSG 255 Query: 159 --------------QALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204 AL ++ +DLT RA G +DPVIGRD E++R +Q+L RRTKNNP+L Sbjct: 256 KAAIVKSSGKKKEKSALAQFCVDLTARATDGLIDPVIGRDMEVQRVVQILCRRTKNNPIL 315 Query: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264 +GE GVGKTAI EGLA I +VP L +R+++LD+G L+AG K RGE E R+ +++ Sbjct: 316 LGESGVGKTAIAEGLAISIAEADVPSFLLTKRIMSLDIGLLMAGTKERGELEARVTTLIS 375 Query: 265 DLAKQEGNVILFIDELHTMVGAGKAD-----GAMDAGNMLKPALARGELHCVGATTLDEY 319 D+ K GN+ILFIDE+H +VG+G A +D ++LKP+L RG+L C +TT+DEY Sbjct: 376 DILKS-GNIILFIDEVHMLVGSGIAGRGNKGSGLDIASLLKPSLGRGQLQCFASTTIDEY 434 Query: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379 + EKD AL RRFQ V + EPS E+ + IL GL+E+YE HH + T AI AA LS R Sbjct: 435 VKLFEKDKALARRFQPVLINEPSQEEAVRILLGLREKYEAHHKCRFTLEAINAAVHLSAR 494 Query: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDR 414 YI DR+LPDKAIDLIDEA S RM+ + +E Sbjct: 495 YIPDRRLPDKAIDLIDEAGSKARMEAYKRKKEKQT 529 >UniRef50_A8EW19 ATP-dependent Clp protease, ATP-binding subunit n=5 Tax=Campylobacterales RepID=A8EW19_ARCB4 Length = 737 Score = 381 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 169/485 (34%), Positives = 264/485 (54%), Gaps = 8/485 (1%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 ++ + + A A S A ++++ H+ L+N + + L G++ L ++ Sbjct: 2 ISKELRHIFAQAVSYAKSSKHEYLTVEHVFLMLINDQT--IENLFIDLGVDTNILFNELK 59 Query: 66 QALNRLPQVEGTGGDVQP--SQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLA 123 ++ + + +P + L ++ Q G + E +A L+ + + Sbjct: 60 SYIDENTPLLPNDANDEPIETVSLSSTIDYMVSHTQSSGKTNANVEDMFVAILKDEKSYS 119 Query: 124 D-ILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIG 182 +LK G +I + I E ND+ + + + L K + +L A++G++DPVIG Sbjct: 120 TYLLKKYGIQRVDILEEISHKDEDEQKNDENS-ENEKVLDKNSSELVSIAKKGEIDPVIG 178 Query: 183 RDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDM 242 RD EI R I++L RR KNNP+L+GEPGVGKTAI EGLA +I +VPE L +V +LDM Sbjct: 179 RDREISRVIEILSRRKKNNPILVGEPGVGKTAIAEGLALQIAQKKVPEFLLDSKVFSLDM 238 Query: 243 GALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGA-MDAGNMLKP 301 G+++AG KYRG+FE++LK +L +++K + N ILFIDE+HT+VGAG G+ MDA N+LKP Sbjct: 239 GSMIAGTKYRGDFEKKLKSLLKEVSKIK-NAILFIDEIHTIVGAGSVGGSAMDASNILKP 297 Query: 302 ALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHH 361 LA G+L C+GATT E+R KD AL RRF KV V EPS+ED+I IL GLK +YE +H Sbjct: 298 MLANGKLRCIGATTFSEFRNDFSKDKALSRRFAKVDVEEPSIEDSILILEGLKSKYEEYH 357 Query: 362 HVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQ 421 V+ + AI +A LS +YI DR LPD AID+IDE ++ ++ + + + + I Sbjct: 358 GVKYSKSAIQSAVELSKKYITDRFLPDCAIDVIDEVGAAKKISLATTLKTKAESNITITS 417 Query: 422 LKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQ 481 +E+ L+ + ++ + + A + + KA L Sbjct: 418 KDVEEIISKMAHIPPKSATKTDLSLLKNLEKNMQKRVFGQDTAISTIVQAIKRNKAGLGL 477 Query: 482 AKIAI 486 K I Sbjct: 478 DKKPI 482 Score = 327 bits (837), Expect = 1e-87, Method: Composition-based stats. Identities = 150/421 (35%), Positives = 236/421 (56%), Gaps = 10/421 (2%) Query: 433 SDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRV 492 D+A +R ++ E E + + K+ +K + A+E +++ Sbjct: 321 KDKALSRRFAKVDVE----EPSIEDSILILEGLKSKYEEYHGVKYSKSAIQSAVELSKKY 376 Query: 493 GDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMM 552 + + I E+ + + KT +T ++ E++++ IP Sbjct: 377 ITDRFLPDCAIDVIDEVGAAKKISLATTLKTKAESNITITSKDVEEIISKMAHIPPKSAT 436 Query: 553 ESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKT 612 +++ L +E+ + RV GQ+ A+ + AI+R++AGL +PIGSFLF GPTGVGKT Sbjct: 437 KTDLSLLKNLEKNMQKRVFGQDTAISTIVQAIKRNKAGLGLDKKPIGSFLFTGPTGVGKT 496 Query: 613 ELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYS 672 E+ + L+ M R DMSE+ME H+VSRL+GAP GYVG+E+GG LTEA+R+ P++ Sbjct: 497 EVARELSLQM---GIHFERFDMSEYMEAHTVSRLIGAPAGYVGFEQGGLLTEAIRKHPHT 553 Query: 673 VILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGEL 732 V+LLDE+EKAHPD+ +ILLQV+D+ +LTD G DF+N V+IMTSNLG+ G Sbjct: 554 VLLLDEIEKAHPDLMSILLQVMDNAQLTDNSGNKADFQNVVLIMTSNLGATE-ANVMGFA 612 Query: 733 DYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYE 792 + E ++ F PEF NR+D VV F L ++ + ++ L K+L ++ + Sbjct: 613 KNEKLNE--NKAINKFFAPEFRNRLDAVVTFESLNIDVVSKVVGKFIEDLEKQLVDKKIK 670 Query: 793 IHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDR 852 I IS +A K L+ GYD GARPL + I +I+NPL +IL G+L G +++++ N + Sbjct: 671 IEISVKAKKELAILGYDKAMGARPLNKVISDKIKNPLTDEILFGKLKKGGIVKIDYNNEF 730 Query: 853 I 853 I Sbjct: 731 I 731 >UniRef50_A8SAZ3 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAZ3_9FIRM Length = 765 Score = 380 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 199/574 (34%), Positives = 291/574 (50%), Gaps = 28/574 (4%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 + L A LA + + HL+ A+L Q+ G+ + LT I ++R Sbjct: 15 FSRPAARLLQQAVQLAGDLGCEQADTSHLLLAMLQQQ-GAAAQFLTRKNITEPEVRRQ-- 71 Query: 66 QALNRLPQVEGTGGDVQ-PSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLAD 124 L + D Q + DL R ++ AQ + E + A LE G A Sbjct: 72 --LAQQRSGPAQRLDRQSMAPDLRRTMDYALIGAQNAHVSRAEPEHLLCAMLEDDGCAAG 129 Query: 125 IL-KAAGATTANITQAIEQMR-----GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLD 178 +L G + + Q+ + +A KY DLT RA +G+LD Sbjct: 130 LLLAEMGLSLTEAVRECRQLSGQFVLPAQPRVSASIPRGSRASDKYCRDLTRRAAEGELD 189 Query: 179 PVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVL 238 PV R+ E+ R +++L RR KN+P LIGEPGVGKTA+ EGLA RI G+VP L+GRR+L Sbjct: 190 PVFCREAELDRMVEILCRRQKNDPCLIGEPGVGKTALAEGLALRIAAGQVPRALQGRRLL 249 Query: 239 ALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNM 298 ALDM +LVAG KYRG+FEERLK +L +L + +G ILFIDE HT+VGAG A+GA+DA ++ Sbjct: 250 ALDMASLVAGTKYRGDFEERLKNLLEELVR-DGTAILFIDEFHTIVGAGAAEGAIDAASI 308 Query: 299 LKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYE 358 LKP LARGEL +GATT E+R +I+KDAALERRF +V V EP+ + IL GL RYE Sbjct: 309 LKPVLARGELQLIGATTNQEFRTHIQKDAALERRFGRVQVEEPTPAQAVEILNGLAPRYE 368 Query: 359 LHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418 +H+V++ + AA LS RY+ R LPDKAIDL+DEA ++ R+ + + L Sbjct: 369 RYHNVRLPPQTLQAAVELSVRYLPGRCLPDKAIDLVDEACAAARILAEKEQRTQPVLTPE 428 Query: 419 IIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQY-SELEEEWKAEKASLSGTQTIKA 477 I + + S +++ + E L E + +E+ + +A A + + Sbjct: 429 DIA-----RVVAAASGVPAQRVGEQERERLDKLESRLNAEIVGQQRAVAAVAGAIRRSRT 483 Query: 478 ELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIA 537 L + I G + + GK L + L + K LL+ +++ + Sbjct: 484 GLGEPGRPI------GAMLFLGPTGVGK-TALARALAVSWFGSEKA--LLKFDMSEYQEQ 534 Query: 538 EVLARWTGIPVSRMMESEREKLLRMEQELHHRVI 571 AR G P + E +L + + V+ Sbjct: 535 HTAARLLGAPPGYLGHDEGGQLTEAVRRRPYSVV 568 Score = 355 bits (911), Expect = 4e-96, Method: Composition-based stats. Identities = 236/823 (28%), Positives = 372/823 (45%), Gaps = 113/823 (13%) Query: 76 GTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAGATTAN 135 G GG S+ R+L +LA G + +LA L+ +G A L T Sbjct: 8 GMGGYRGFSRPAARLLQQAVQLAGDLGCEQADTSHLLLAMLQQQGAAAQFLTRKNITEPE 67 Query: 136 ITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQ 195 + + + Q R G D++ + + A G + + R E +L+ Sbjct: 68 VRRQLAQQRSGP----AQRLDRQSMAPDLRRTM-DYALIGAQNAHVSRAEPEHLLCAMLE 122 Query: 196 RRTKNNPVLIGEPGVGKTAIVEGL----------AQRIINGEVPEGLKGRRVLALDMGAL 245 +L+ E G+ T V AQ ++ +P G + D+ Sbjct: 123 DDGCAAGLLLAEMGLSLTEAVRECRQLSGQFVLPAQPRVSASIPRGSRASDKYCRDLTRR 182 Query: 246 VAGAKYRGEF------EERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNML 299 A GE E L ++ L +++ N I E G G Sbjct: 183 AA----EGELDPVFCREAELDRMVEILCRRQKNDPCLIGEP----GVG------------ 222 Query: 300 KPALARGELHCVGATTLDEY---RQYIEKDAA-----------LERRFQKVFVAEPSVED 345 K ALA G + A + R+ + D A E R + + E V D Sbjct: 223 KTALAEGLALRIAAGQVPRALQGRRLLALDMASLVAGTKYRGDFEERLKN--LLEELVRD 280 Query: 346 TIAILRGLKERYELHHHVQ---ITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIR 402 AIL + H + + AI AA+ L P A + ++ Sbjct: 281 GTAIL-----FIDEFHTIVGAGAAEGAIDAASIL---------KPVLARGELQLIGATTN 326 Query: 403 MQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEW 462 + + ++ L+RR ++++E+ + + L + Sbjct: 327 QEFRTHIQKDAALERRFGRVQVEEP-------------------TPAQAVEILNGLAPRY 367 Query: 463 KAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGK 522 + QT++A +E + + K +L + AA ++ + Sbjct: 368 ERYHNVRLPPQTLQAAVELSVRYL-----------PGRCLPDKAIDLVDEACAAARILAE 416 Query: 523 TMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSN 582 + + +T +IA V+A +G+P R+ E ERE+L ++E L+ ++GQ AV AV+ Sbjct: 417 KEQRTQPVLTPEDIARVVAAASGVPAQRVGEQERERLDKLESRLNAEIVGQQRAVAAVAG 476 Query: 583 AIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHS 642 AIRRSR GL +P RPIG+ LFLGPTGVGKT L +ALA F S++A+++ DMSE+ E+H+ Sbjct: 477 AIRRSRTGLGEPGRPIGAMLFLGPTGVGKTALARALAVSWFGSEKALLKFDMSEYQEQHT 536 Query: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702 +RL+GAPPGY+G++EGG LTEAVRRRPYSV+L DE+EKAHPD+ NILLQ+L+DG+LTD Sbjct: 537 AARLLGAPPGYLGHDEGGQLTEAVRRRPYSVVLFDEIEKAHPDIQNILLQILEDGQLTDA 596 Query: 703 QGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVL--------GVVSHNFRPEFI 754 GR DFRNT+V++TSNLG+ + + L +A E V FRPE + Sbjct: 597 MGRKADFRNTIVLLTSNLGARFLAGQNAPLGFAAGAEAVFEKQSAQAVEEAKKWFRPELL 656 Query: 755 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 814 R+DEV+VF PL E+++ +IA+ L +L +R GY + + + YGA Sbjct: 657 GRLDEVIVFRPLAEENLCAIAEKMLCQLEQRAARSGYRLRHTPQV-GAALAARAQSAYGA 715 Query: 815 RPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857 R L+R + + +E LA +I +G G+ + D + ++ Sbjct: 716 RELRRQVDRAVEQALANRIAAGTACVGQHWTADCAADGSIVLR 758 >UniRef50_A3K6L5 ATP-dependent Clp protease, ATP-binding subunit ClpB (Fragment) n=1 Tax=Sagittula stellata E-37 RepID=A3K6L5_9RHOB Length = 637 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 191/618 (30%), Positives = 313/618 (50%), Gaps = 37/618 (5%) Query: 271 GNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALE 330 N +L ID+ + A + +G N + + G C+ ++ ++ + + Sbjct: 22 ANSVLLIDDFRDFIEAARNNGTTHLINAVMRDVLTGRYQCILEARDEDLEIVLKCHSNMR 81 Query: 331 RRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIAD-----RQ 385 F + + EP + I R HH V +T+ AI AA L+ +Y R Sbjct: 82 EVFTLLEIREPDPDALKEIALVGAGRLTAHHGVPVTEQAIAAAIDLTSKYHVGDLSLSRA 141 Query: 386 LPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLN 445 P++ ++LID A +S R + +P L RL + +++ A ++ D L Sbjct: 142 QPERTLNLIDRALTSYRQTVHRRPPHLARLRATLAEIEALPDAARSAD---IVRQRDELQ 198 Query: 446 EELSDKERQYSELEEEWKAEKASLS---------------GTQTIKAELEQAKIAIEQAR 490 L+ E ++ + A + + Q +AE + A + Sbjct: 199 GMLATAETDWAAKTDRLTALRNAQRSGEELLLALEEQLSGERQKERAEAAPTEAAPTFSA 258 Query: 491 RVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAE------IAEVLARWT 544 R+ A + +I + +Q A + L+ ++ + + + Sbjct: 259 RLSGGAGFGSREENRILQEIRQATTAIADNKRAFDTLQEEMNAGLALGAAAVTLEFSAIS 318 Query: 545 GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFL 604 GIP ++ + EREKLL ++Q L RV GQ+ AV+ + A+ + AGL +P++P GSF+F Sbjct: 319 GIPAEKLNQDEREKLLTLDQTLKARVYGQDHAVEKLVGAVLMANAGLKEPDKPQGSFMFC 378 Query: 605 GPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTE 664 GP+GVGKTE+ K LA + D+++AM+R DMSE+MEKH++++L+GAPPGY GYE GG LT Sbjct: 379 GPSGVGKTEIAKTLAMALKDNEKAMLRFDMSEYMEKHALAKLIGAPPGYEGYEAGGILTN 438 Query: 665 AVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDL 724 AVRR P+S+IL DE+EKAHPDVFN+ LQVLDDGRLTD +G TV F NT+++MT+N+G Sbjct: 439 AVRRNPHSIILFDEIEKAHPDVFNVFLQVLDDGRLTDNRGLTVSFANTLILMTTNIGQAH 498 Query: 725 IQERFGELDYAHMKELVLGVVSHNFRPEFINRID---EVVVFHPLGEQHIASIAQIQLKR 781 +L +A E + + FRPEF+NR + ++ F L + I IA +L++ Sbjct: 499 FLNA--DLQFAAAMEETMRDLEGTFRPEFLNRFNGRQNIIGFRTLPLELIEKIANRELRK 556 Query: 782 LYKRLEERGYEIHISD--EALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELV 839 + R+ G+ + I+ E + L + YDPV+GAR + ++ +A+ ILS Sbjct: 557 VNARIRAAGHAVTIAMAPEQVSALCADRYDPVHGARGIPGFFAAEVYPSIARTILSAPET 616 Query: 840 PGKV-IRLEVNEDRIVAV 856 G + +R ++ V + Sbjct: 617 AGTLDVRYHADDGGRVEI 634 >UniRef50_C7H753 ATP-dependent Clp protease, ATP-binding subunit ClpC n=2 Tax=Ruminococcaceae RepID=C7H753_9FIRM Length = 777 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 178/478 (37%), Positives = 252/478 (52%), Gaps = 10/478 (2%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 + + L L +A LA + HL+ A+L + G L I +R + Sbjct: 24 FSREAGLLLDEAVELAGSMGCARADTGHLLLAMLQTDRGPAGRFLAGKNITEPAVRRQLA 83 Query: 66 QALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADI 125 + + + DL R ++ AQ E + A LE A + Sbjct: 84 EGRTSPARQLDRKA---LAPDLRRAMDYALIGAQNAHLPKAEPEHLLCAMLEDTDCAAGV 140 Query: 126 LKA-----AGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPV 180 L A Q Q + +A KY DLT RA G+LDPV Sbjct: 141 LLASMGVQLAEAVRECRQISGQFILPGTPRASAMPRGSRASDKYCRDLTRRAVDGELDPV 200 Query: 181 IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL 240 RD E+ R +++L RR KNNP L+GEPGVGKTA+ EGLAQRI + VP L+GRR+LAL Sbjct: 201 FCRDAELDRMVEILCRRQKNNPCLVGEPGVGKTALAEGLAQRIASRNVPRMLQGRRLLAL 260 Query: 241 DMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLK 300 DM +LVAG KYRG+FEER K +L +L + +G+ ILF+DE HT+VGAG A+GA+DA ++LK Sbjct: 261 DMASLVAGTKYRGDFEERFKTLLEELVR-DGSAILFVDEFHTIVGAGAAEGAIDAASILK 319 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELH 360 P LARGEL +GATT E+R +I+KDAALERRF +V + EP+ AIL GL RYE + Sbjct: 320 PVLARGELQLIGATTDQEFRTHIQKDAALERRFGRVQIEEPTPAQAAAILEGLAPRYERY 379 Query: 361 HHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRII 420 H V + + A LS RY+ R LPDKAIDL+DEA ++ R++ + + + L R I Sbjct: 380 HSVHLPPETLREAVELSVRYLPGRFLPDKAIDLVDEACAAARIRAEREGKADPTLTREDI 439 Query: 421 QLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAE 478 ++ QA + +K + L++ S + ++ A ++ ++T E Sbjct: 440 A-RVVAQASGVPVERVGEKERERLDKLESRLNAEIVGQQKAVAAVAGAIRRSRTGLGE 496 Score = 325 bits (834), Expect = 4e-87, Method: Composition-based stats. Identities = 234/804 (29%), Positives = 369/804 (45%), Gaps = 99/804 (12%) Query: 73 QVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALE-SRGTLADILKAAGA 131 + G G S++ +L+ +LA G + +LA L+ RG L Sbjct: 14 EAFGMGRHKGFSREAGLLLDEAVELAGSMGCARADTGHLLLAMLQTDRGPAGRFLAG--- 70 Query: 132 TTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTI 191 NIT+ + + E + R+AL + A G + + + E Sbjct: 71 --KNITEPAVRRQLAEGRTSPARQLDRKALAPDLRRAMDYALIGAQNAHLPKAEPEHLLC 128 Query: 192 QVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKY 251 +L+ VL+ GV V R I+G+ L G + A KY Sbjct: 129 AMLEDTDCAAGVLLASMGVQLAEAVREC--RQISGQF--ILPGTPRASAMPRGSRASDKY 184 Query: 252 RGEFEER-LKGVLNDLAKQEGNVILFIDEL-------HTMVGAGKADGAMDAGNMLKPAL 303 + R + G L+ + ++ + ++ L +VG K AL Sbjct: 185 CRDLTRRAVDGELDPVFCRDAELDRMVEILCRRQKNNPCLVGEPGVG---------KTAL 235 Query: 304 ARGELHCVGATTLDEY---RQYIEKDAA-----------LERRFQKVFVAEPSVEDTIAI 349 A G + + + R+ + D A E RF+ + E V D AI Sbjct: 236 AEGLAQRIASRNVPRMLQGRRLLALDMASLVAGTKYRGDFEERFKT--LLEELVRDGSAI 293 Query: 350 LRGLKERYELHHHVQ---ITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQID 406 L + H + + AI AA+ L P A + ++ + Sbjct: 294 L-----FVDEFHTIVGAGAAEGAIDAASIL---------KPVLARGELQLIGATTDQEFR 339 Query: 407 SKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEK 466 + ++ L+RR ++++E+ + L ++ Sbjct: 340 THIQKDAALERRFGRVQIEEP-------------------TPAQAAAILEGLAPRYERYH 380 Query: 467 ASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRL 526 + +T++ +E + + K +L + AA ++ + Sbjct: 381 SVHLPPETLREAVELSVRYL-----------PGRFLPDKAIDLVDEACAAARIRAEREGK 429 Query: 527 LRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRR 586 +T +IA V+A+ +G+PV R+ E ERE+L ++E L+ ++GQ +AV AV+ AIRR Sbjct: 430 ADPTLTREDIARVVAQASGVPVERVGEKERERLDKLESRLNAEIVGQQKAVAAVAGAIRR 489 Query: 587 SRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRL 646 SR GL +P RP+G+ LFLGPTGVGKT L KALA F S++A+++ DMSE+ E+H+ +RL Sbjct: 490 SRTGLGEPGRPMGAMLFLGPTGVGKTALAKALAASWFGSEKALLKFDMSEYQEQHTTARL 549 Query: 647 VGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRT 706 +GAPPGY+G++EGG LTEAVRRRPYSV+L DE+EKAHPD+ NILLQ+L+DG+LTD GR Sbjct: 550 LGAPPGYLGHDEGGQLTEAVRRRPYSVVLFDEIEKAHPDIQNILLQILEDGQLTDAMGRK 609 Query: 707 VDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVL--------GVVSHNFRPEFINRID 758 DFRNT+V++TSNLG+ + + L +A E V FRPE + R+D Sbjct: 610 ADFRNTIVLLTSNLGARFLAGQSAPLGFAAGSEAVFEKQSAQAIEEAKKWFRPELVGRLD 669 Query: 759 EVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLK 818 E++VF PL E + +IA+ L +L R GY++ + +L+ P YGAR L+ Sbjct: 670 ELIVFRPLAEDSLCAIAEKLLGQLEARAARNGYQLTHTPRVGAVLAARARSP-YGARELR 728 Query: 819 RAIQQQIENPLAQQILSGELVPGK 842 R + + +E LA QI SG G+ Sbjct: 729 RQVDRAVEQALANQIASGTAHTGQ 752 >UniRef50_A4S065 Chaperone, Hsp100 family, ClpC-type n=4 Tax=Mamiellales RepID=A4S065_OSTLU Length = 781 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 166/327 (50%), Positives = 229/327 (70%), Gaps = 5/327 (1%) Query: 531 VTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590 V ++ I EV+A+WTG+PV ++ E L+ EQEL RVIGQ EAV ++S AIRR+RAG Sbjct: 400 VDESHITEVVAQWTGVPVQQLSADESLSLMNFEQELGKRVIGQVEAVRSISQAIRRARAG 459 Query: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAP 650 LAD ++P+ S +F GPTGVGKTEL KA+A F +++AMVRIDMSE+ME HSVSRL+G P Sbjct: 460 LADASKPVASIIFSGPTGVGKTELAKAVAQTYFGAEKAMVRIDMSEYMESHSVSRLIGPP 519 Query: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFR 710 PGY+G+ EGG LTEAVR P+S++LLDE+EKAHPDVFNILLQVL+DGRLTD +GRTVDF Sbjct: 520 PGYIGFGEGGQLTEAVRTNPHSLVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFT 579 Query: 711 NTVVIMTSNLGSDLIQERF-----GELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHP 765 N +++MTSN+GS I E E Y ++ V + +RPEF+NR+DE+++F P Sbjct: 580 NAMLVMTSNIGSREILESMSGEGEDEEKYKKLQTQVKRELGKEYRPEFLNRLDEIIIFRP 639 Query: 766 LGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQI 825 L +++IA + L + KR RG + +D LL NG+ P +GARP++R ++ + Sbjct: 640 LERPEVSAIADLMLASVSKRALARGITLDFTDSFKSLLYSNGFSPRFGARPMRRCVRGLL 699 Query: 826 ENPLAQQILSGELVPGKVIRLEVNEDR 852 EN LA+ +L G G + + ++D+ Sbjct: 700 ENNLAECMLDGFASSGDTVNFDYDDDQ 726 Score = 360 bits (924), Expect = 1e-97, Method: Composition-based stats. Identities = 175/399 (43%), Positives = 236/399 (59%), Gaps = 20/399 (5%) Query: 20 LALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDI-------NQALNRLP 72 LA + H++ AL + S L G+ R + L Sbjct: 3 LAKKFRSAECGSEHVLLALTRNRDRT-SKALHKHGVTEEATRRALGERAGVSELELMNPF 61 Query: 73 QVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAA--G 130 G + S +L +V + G ++ LA ++ + A AA G Sbjct: 62 NKPSAEGLLALSDELKKVFERASASGSEVGSKELA-----LAMIDEPASGARATMAALEG 116 Query: 131 ATTANITQAIEQMRGGESVN--DQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIR 188 + + I E V + ++Q L +IDLT A +GKLDPV+GRDEE+ Sbjct: 117 CDLKVLRKEITGANERELVGAGKKTRNTKKQTLADCSIDLTAEAREGKLDPVLGRDEEVT 176 Query: 189 RTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAG 248 R +++L RR K+NP L+GEPGVGKTAI EGLA I G+VPE LK +RV++L +G L+A Sbjct: 177 RVMRILVRRRKSNPCLVGEPGVGKTAIAEGLAMMIAKGDVPESLKEKRVVSLQIGLLLAD 236 Query: 249 AKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGA--MDAGNMLKPALARG 306 KYRGEFEE++K V+ ++ KQ G++ILF+DE+H +VGAG MDAGN++KPALARG Sbjct: 237 TKYRGEFEEKMKNVMEEV-KQAGDIILFVDEIHMLVGAGGTGEDGGMDAGNLMKPALARG 295 Query: 307 ELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQIT 366 EL C+GATT+DEYR++IEKDAALERRFQ V V EPS E T+ ILRGLK+ Y+ HH V T Sbjct: 296 ELQCIGATTIDEYRKHIEKDAALERRFQPVRVIEPSPEQTLTILRGLKDTYQEHHGVSFT 355 Query: 367 DPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQI 405 D A+ AA +LS RYI DR LPDKAID+IDEA + +++ Sbjct: 356 DEALRAAVSLSTRYINDRFLPDKAIDVIDEAGALVQLTP 394 >UniRef50_UPI0001C372BC ATPase n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C372BC Length = 750 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 151/409 (36%), Positives = 236/409 (57%), Gaps = 8/409 (1%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M D+ + + A ++A + F+ HL+ ++ + + + +L G+ L Sbjct: 1 MNTDKFAKRSVKIIEGAVAIASQMGHTFVGSEHLLLSIAKEGNSAAADILIDNGLTYDDL 60 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG 120 ++ + + + + T + + R+L + E + A + Sbjct: 61 QSAVVRMIGKG--TPSTLSSRYFTASVKRILENAASGGTIPKRRQATPENILSAVINDTS 118 Query: 121 TLADILK-AAGATTANITQAIEQMRGGE----SVNDQGAEDQRQALKKYTIDLTERAEQG 175 A L +AG I ++++ + + Q L +Y +T+ Q Sbjct: 119 CTARKLIVSAGGDIRGICESLDVNFRLDDDELYSSCAPKRSQFPHLFRYGRHITDSNVQA 178 Query: 176 KLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGR 235 K DP+IGR+ E+++ + L RRTK+NP LIGE GVGKTAIV+G+A I+G+VPE L+ + Sbjct: 179 KRDPLIGREAEVQQVLMTLSRRTKSNPCLIGEAGVGKTAIVDGVAGLFISGDVPEALRNK 238 Query: 236 RVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDA 295 + ALD+ AL++GAKYRG+FEERL+G + + + GN+ILFIDE+HT+VGAG A+GA+DA Sbjct: 239 YIFALDLTALISGAKYRGDFEERLRGCIEEAS-SSGNIILFIDEIHTIVGAGAAEGAIDA 297 Query: 296 GNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKE 355 N++KP LAR EL +GATT DEYR+ IEKD ALERRFQ V V EPSV + + +++G++ Sbjct: 298 ANIMKPQLARSELQVIGATTFDEYRKTIEKDKALERRFQPVTVNEPSVGECVEMIKGIRT 357 Query: 356 RYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQ 404 YE +H+V I+D A + S R+I DR LPDKAID +DEA ++ ++ Sbjct: 358 AYEKYHNVIISDEAAEFSVRTSARFINDRFLPDKAIDTLDEACAAAAIR 406 Score = 305 bits (780), Expect = 6e-81, Method: Composition-based stats. Identities = 146/416 (35%), Positives = 219/416 (52%), Gaps = 9/416 (2%) Query: 451 KERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELE 510 ER++ + + + + I+ E+ I R S + Sbjct: 331 LERRFQPVTVNEPSVGECVEMIKGIRTAYEKYHNVIISDEAAEFSVRTSARFINDRFLPD 390 Query: 511 KQLEAATQLEGKTMRLLRN-----KVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQE 565 K ++ + R +++ +IA V++ TGIP S + + +E+ Sbjct: 391 KAIDTLDEACAAAAIRNRENCRKYEISCGDIAHVISLKTGIPESSITAFSDCRAAGIEKL 450 Query: 566 LHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDS 625 L R+ G + + V+ A+ RS +GL D RP SFLF GPTGVGKTEL KALA F S Sbjct: 451 LTRRITGHRDIIRKVAEAVYRSDSGLKDSRRPAASFLFAGPTGVGKTELAKALAEAAFGS 510 Query: 626 DEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEG-GYLTEAVRRRPYSVILLDEVEKAHP 684 + +RIDMSEFMEK S+++L+GAPPGY GY EG L E VRR PYS++L DE+EKA Sbjct: 511 SGSFIRIDMSEFMEKSSITKLIGAPPGYAGYSEGRSNLCEQVRRHPYSLVLFDEIEKADT 570 Query: 685 DVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFG---ELDYAHMKELV 741 +V N+LLQ+LD+G +TD + + FR+ +IMTSN+G+DL+ + E V Sbjct: 571 EVLNLLLQILDEGVITDSEMHKISFRSCFIIMTSNIGADLVTGNSSMGFGSSAETVNERV 630 Query: 742 LGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALK 801 + F PEFINRIDE+ VF L + I + L L +R + G + S++ ++ Sbjct: 631 TDRIRQYFSPEFINRIDEIAVFGKLNSCDLLGITRNLLSDLKRRSQSIGITVEYSEKTVE 690 Query: 802 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857 + S YGARP++R I IEN LAQ I++ E+ G +R++ + I+ + Sbjct: 691 IFSRTKDTDRYGARPIRRRITDMIENKLAQMIVNREVAKGDSVRVDTSNGEIMITK 746 >UniRef50_C5ZY74 ATP-dependent Clp protease, ATP-binding subunit ClpA n=2 Tax=Helicobacter RepID=C5ZY74_9HELI Length = 746 Score = 375 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 167/475 (35%), Positives = 260/475 (54%), Gaps = 11/475 (2%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 ++ + L AQS A ++++ H+ +LL+ + V + G N L++ I Sbjct: 4 ISKELNYILQAAQSRAKHLGHEYLTLEHIFHSLLDSQT--VIKAIQECGGNIKALKSQIE 61 Query: 66 QALNRLPQVEGTGGDVQ-PSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTL-A 123 + L Q ++ + + RV+ + + + A LE Sbjct: 62 RYLTHFLQSHPDASELPIETLAVTRVIEIMVSHVKGAQRKEAQVGDLLAAILEEDKAFCT 121 Query: 124 DILKAAGATTANITQAIEQMRGGESVND--QGAEDQRQALKKYTIDLTERAEQGKLDPVI 181 +LKA G T NI + I + + + + Q L+KY I+LT+ A++GK+DP+I Sbjct: 122 QLLKAQGITRLNILEYITENQDTQQAQKFEKDENKQESILEKYCINLTQEAKEGKIDPII 181 Query: 182 GRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALD 241 GRD+EI R ++VL RR KNNP+L+GEPGVGKTAI EGLA I+ + L G + L+ Sbjct: 182 GRDKEIERCLEVLLRRKKNNPLLVGEPGVGKTAIAEGLA--IVLNQENNPLFGNEIFMLN 239 Query: 242 MGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKAD-GAMDAGNMLK 300 MGALVAG KYRG+FE+R+K + ++ +++ NVILFIDE+H ++GAG + G+MDA N+LK Sbjct: 240 MGALVAGTKYRGDFEKRIKALSEEVLERK-NVILFIDEIHMLIGAGATNSGSMDASNLLK 298 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELH 360 P L G+L C+GA+T EYR +++KD A RRF K+ V EPS E+ + IL+G+K+ YE H Sbjct: 299 PMLGSGKLRCIGASTYAEYRNFLDKDKAFSRRFAKIDVDEPSQEEAVLILQGVKKYYEKH 358 Query: 361 HHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRII 420 H+V + A LS RY+ DR LPDKAID+IDE ++ ++ S L + + + Sbjct: 359 HNVIYPLETLRLAVELSSRYLHDRFLPDKAIDVIDEVGAAYKLASKSGKVSLSSIKQMVA 418 Query: 421 QL-KLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQT 474 ++ K+ + K+ K L + ++ E+ K +A L Sbjct: 419 KMAKIPEIEATKDDKNLLKNLQKHLQSRIFGQDLAIKEIVTALKRNRAGLGAPNK 473 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 149/421 (35%), Positives = 232/421 (55%), Gaps = 19/421 (4%) Query: 432 ESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARR 491 + D+A +R ++ + E E + K + LE ++A+E + R Sbjct: 322 DKDKAFSRRFAKIDVD----EPSQEEAVLILQGVKKYYEKHHNVIYPLETLRLAVELSSR 377 Query: 492 VGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRM 551 + + I E+ + A++ KV+ + I +++A+ IP Sbjct: 378 YLHDRFLPDKAIDVIDEVGAAYKLASK---------SGKVSLSSIKQMVAKMAKIPEIEA 428 Query: 552 MESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGK 611 + ++ L +++ L R+ GQ+ A+ + A++R+RAGL PN+PIGSFLF GP+GVGK Sbjct: 429 TKDDKNLLKNLQKHLQSRIFGQDLAIKEIVTALKRNRAGLGAPNKPIGSFLFSGPSGVGK 488 Query: 612 TELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPY 671 TEL K +A + RIDMSE+MEK+S S L+GAP GYVGY++GG LTE +++ P+ Sbjct: 489 TELAKEIAKAL---GINFERIDMSEYMEKYSSSGLIGAPAGYVGYDKGGILTEMIKKNPH 545 Query: 672 SVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGE 731 +++LLDE+EKAHPDV NI LQV+D+ +LTD G + DF + ++IMTSN+GS Sbjct: 546 TLLLLDEIEKAHPDVLNIFLQVMDNAKLTDNNGESADFSSVILIMTSNVGSKEAPTLGFT 605 Query: 732 LDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGY 791 D + NF PEF NR+D +V F+PL E I I + + L K++ + Sbjct: 606 QDSVAKFN---SAIKDNFTPEFRNRLDAIVAFNPLSETEILKIVEKNINDLNKQIAPKNI 662 Query: 792 EIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNED 851 I + A + L++ GY+P GARPL IQ++I+NPL+ +L GEL G + N+ Sbjct: 663 HILLDKSAKEQLAKLGYNPELGARPLGLVIQEKIKNPLSDLMLFGELEKGGEVIFSYNKK 722 Query: 852 R 852 Sbjct: 723 S 723 >UniRef50_B9H7W9 Predicted protein n=3 Tax=rosids RepID=B9H7W9_POPTR Length = 643 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 176/392 (44%), Positives = 252/392 (64%), Gaps = 2/392 (0%) Query: 467 ASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRL 526 + G +++ A A+ A R+ + K +L + A QL Sbjct: 235 KGIQGKYEAHHDVKYADEALVAAVRLSNQYISGLFLPDKAIDLIDEAGARVQLRQARSAS 294 Query: 527 LRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRR 586 + VT+ +I V++ TGIP+ ++ + E +LL ME ELH ++GQ EAV AVS+AIRR Sbjct: 295 EKLLVTEEDIQAVVSMVTGIPLDKVTDKESRRLLNMEAELHKYIVGQEEAVKAVSHAIRR 354 Query: 587 SRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRL 646 +R G DPN+PI SFLF GPTGVGKTEL KALA F S EA+VRIDMSE+MEKH+VS+L Sbjct: 355 ARVGTKDPNKPIASFLFTGPTGVGKTELAKALAVEYFGSKEAVVRIDMSEYMEKHTVSKL 414 Query: 647 VGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRT 706 G+PPGY+GY++GG TEAVR R ++V+L DE+EKAH DV + LQ+LDDG LTDG+GR Sbjct: 415 FGSPPGYIGYDDGGQFTEAVRCRAHTVVLFDEIEKAHQDVNRVFLQILDDGTLTDGKGRK 474 Query: 707 VDFRNTVVIMTSNLGSDLI--QERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFH 764 VDF+NT++IMTSN+G+ LI ++ E+ + +K +V + F PEF+NRIDEV+VF Sbjct: 475 VDFKNTIIIMTSNIGNSLIAQEDEEDEIRFNTVKLIVAEELKKEFSPEFLNRIDEVIVFR 534 Query: 765 PLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQ 824 L + IA + L +Y RL+ + I ++D + + E G + YGARPLKRAI + Sbjct: 535 KLNNAQLNEIADLMLAEVYGRLKAKNIIIRVTDGLKRKIIEEGNNLSYGARPLKRAIVRL 594 Query: 825 IENPLAQQILSGELVPGKVIRLEVNEDRIVAV 856 +E+ +A+ IL+G + G+ + ++VN + V + Sbjct: 595 LEDNIAKGILNGFVEEGRSVIVDVNSNGNVIM 626 Score = 312 bits (798), Expect = 5e-83, Method: Composition-based stats. Identities = 149/308 (48%), Positives = 204/308 (66%), Gaps = 8/308 (2%) Query: 116 LESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTER--AE 173 LE + AD+L G + Q ++ V AE L T+ L Sbjct: 4 LEKQHFKADMLNKYGTDLTKMAQEVKPDFSFSHV---LAEPVTSELATITLTLASLNGIL 60 Query: 174 QGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLK 233 QGKLD V+GR ++I R Q+L +R KNNP L+G+PGVGKT IVEGLA I+ G VP L+ Sbjct: 61 QGKLDQVVGRRKQIERVTQILCKRRKNNPCLVGDPGVGKTVIVEGLAANIVKGTVPSKLE 120 Query: 234 GRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAM 293 G+++ ALDM LVAG K+ G+FEERL G+++++ + +GN++LFIDELHT+VG G+ + Sbjct: 121 GKKIFALDMARLVAGTKFHGDFEERLTGIVDEVKQSDGNIVLFIDELHTLVGNGQ---TL 177 Query: 294 DAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGL 353 DA N+LKPALARGEL C+GATT+DEYR+YIEKD AL+RRF V V EPSV++ + IL+G+ Sbjct: 178 DATNILKPALARGELKCIGATTIDEYRRYIEKDGALKRRFLHVDVPEPSVDEAVEILKGI 237 Query: 354 KERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELD 413 + +YE HH V+ D A+VAA LS++YI+ LPDKAIDLIDEA + ++++ E Sbjct: 238 QGKYEAHHDVKYADEALVAAVRLSNQYISGLFLPDKAIDLIDEAGARVQLRQARSASEKL 297 Query: 414 RLDRRIIQ 421 + IQ Sbjct: 298 LVTEEDIQ 305 >UniRef50_A6QBZ7 ATP-dependent Clp protease, ATP-binding subunit ClpA n=3 Tax=Epsilonproteobacteria RepID=A6QBZ7_SULNB Length = 729 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 170/471 (36%), Positives = 265/471 (56%), Gaps = 8/471 (1%) Query: 9 KFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQAL 68 +A A + ++++ H+ +++ E G +L++ N L I + + Sbjct: 5 ALNDVFKNAVKYAKENRHEYLTVEHVFLSVVRSEEGI--EILSTLDANLEILEEGIVEHI 62 Query: 69 NRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLA-DILK 127 ++ + + L R +N G S + A + A ++K Sbjct: 63 HKTIPSLKEAVEPFETVALSRAINDMMTHIHSAGRTEASIGDMLAAIFMQEHSYAVYLMK 122 Query: 128 AAGATTANITQAIEQMRGGESVNDQG-AEDQRQALKKYTIDLTERAEQGKLDPVIGRDEE 186 G +I + I R + + + + L+++T++L A+ GK+DPV+GR +E Sbjct: 123 KEGIARVDILEVISHNREDHAQTETDKSAKEETVLEQFTMELVALAKTGKIDPVVGRVDE 182 Query: 187 IRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALV 246 I R +Q L RR KNNP+L+GEPGVGKTAI EGLA +I G+VP+ +K +V ALDMGAL+ Sbjct: 183 INRVMQTLCRRKKNNPLLVGEPGVGKTAIAEGLALKISEGDVPDVIKDAKVYALDMGALI 242 Query: 247 AGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGK-ADGAMDAGNMLKPALAR 305 AG KYRG+FE+RLKG++N+L++ + ILFIDE+HTMVGAG + G+MDA N+LKPALAR Sbjct: 243 AGTKYRGDFEKRLKGIINELSQ-MDDAILFIDEIHTMVGAGATSGGSMDASNLLKPALAR 301 Query: 306 GELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQI 365 G+L C+GATT EYR + +KD AL RRF K+ V EPSVEDT IL+G++ +YE HH+++ Sbjct: 302 GDLKCIGATTYAEYRNFFDKDKALSRRFAKIDVEEPSVEDTFTILKGVQHKYEDHHNIKF 361 Query: 366 TDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQ-IDSKPEELDRLDRRIIQ-LK 423 TD A+ +A LS +Y+ DR LPDKA+D+IDE + ++ + + ++ + + +K Sbjct: 362 TDEALQSAIDLSVKYLHDRFLPDKAMDIIDEVGAHFMLKGAEGVIVKPKDIEESVAKMMK 421 Query: 424 LEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQT 474 L + + + K L+ + + EL K A L+ Sbjct: 422 LPSTVIGTDDTKKLKTLEKDLSAHIIGQNEAIEELATAIKRSYAGLNAPNR 472 Score = 337 bits (863), Expect = 2e-90, Method: Composition-based stats. Identities = 211/796 (26%), Positives = 352/796 (44%), Gaps = 97/796 (12%) Query: 84 SQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAGATTANITQAIEQM 143 S L V K A++ +++ E L+ + S + +IL A + + I + Sbjct: 3 SIALNDVFKNAVKYAKENRHEYLTVEHVFLSVVRSEEGI-EILSTLDANLEILEEGIVEH 61 Query: 144 RGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPV 203 + + A + + + L R + Sbjct: 62 IHKTIPSLKEAVEPFETVA-------------------------------LSRAINDMMT 90 Query: 204 LIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRR--VLALDMGALVAGAKYRGEFEERLKG 261 I G + +I + LA + ++ + +D+ +++ + E+ + Sbjct: 91 HIHSAGRTEASIGDMLAAIFMQEHSYAVYLMKKEGIARVDILEVISHNR-----EDHAQT 145 Query: 262 VLNDLAKQEGNVILFIDELHTMVGAGKAD---GAMDAGNMLKPALARGELHCVGATTLDE 318 + AK+E + F EL + GK D G +D N + L R + + Sbjct: 146 ETDKSAKEETVLEQFTMELVALAKTGKIDPVVGRVDEINRVMQTLCRRKKN--------- 196 Query: 319 YRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSH 378 + V EP V T AI GL + + A V A + Sbjct: 197 ---------------NPLLVGEPGVGKT-AIAEGLALKISEGDVPDVIKDAKVYALDMGA 240 Query: 379 -----RY-----------IADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQL 422 +Y I + D AI IDE + + S + Sbjct: 241 LIAGTKYRGDFEKRLKGIINELSQMDDAILFIDEIHTMVGAGATSGGSMDASNLLKPALA 300 Query: 423 KLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQA 482 + + + + + A + ++ LS + + E + L G Q + Sbjct: 301 RGDLKCI-GATTYAEYRNFFDKDKALSRRFAKIDVEEPSVEDTFTILKGVQHKYEDHHNI 359 Query: 483 KIAIEQARRVGDLA---RMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEV 539 K E + DL+ K ++ ++ A L+G +++ K +I E Sbjct: 360 KFTDEALQSAIDLSVKYLHDRFLPDKAMDIIDEVGAHFMLKGAEGVIVKPK----DIEES 415 Query: 540 LARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIG 599 +A+ +P + + + +KL +E++L +IGQNEA++ ++ AI+RS AGL PNRPIG Sbjct: 416 VAKMMKLPSTVIGTDDTKKLKTLEKDLSAHIIGQNEAIEELATAIKRSYAGLNAPNRPIG 475 Query: 600 SFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEG 659 SFLF+GPTGVGKT L LA M RIDMSE+ME H++SRLVGAPPGYVGYE+G Sbjct: 476 SFLFVGPTGVGKTALATQLAETMH---VHFERIDMSEYMEAHTISRLVGAPPGYVGYEQG 532 Query: 660 GYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSN 719 G LTE +++ P++V+LLDE+EKAHPD+ NILLQV+D +LTD G DF+N ++IMTSN Sbjct: 533 GLLTEMIKKHPHTVLLLDEIEKAHPDIMNILLQVMDGAKLTDNNGVVSDFKNVILIMTSN 592 Query: 720 LGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQL 779 +G+ D + + + F PEF+NR+ VV F+ L + + SI ++L Sbjct: 593 IGTKEANVMGFNKDNSMKTD---KALKAFFAPEFMNRLSAVVEFNTLDLETLVSIVDVEL 649 Query: 780 KRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELV 839 +L L+ + ++ +S +A + L+ GYD YGAR + R I ++I+ L ++IL G L Sbjct: 650 DKLNLMLKPKNIKVKVSKKAKEYLANEGYDERYGARHIARVIDEKIKEALTEEILFGRLK 709 Query: 840 PGKVIRLEVNEDRIVA 855 G ++++ + ++ Sbjct: 710 KGGLVKVGLKNGKLTF 725 >UniRef50_A5MZQ1 ClpA n=7 Tax=Clostridium RepID=A5MZQ1_CLOK5 Length = 746 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 175/583 (30%), Positives = 289/583 (49%), Gaps = 38/583 (6%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M+LD++ + A + A +++ P H++ A L G ++ S G N + Sbjct: 1 MKLDKI---VNEIITAAYNEARYCKHEYFTPEHVLYAALFFPEGI--DIIESCGGNVKNI 55 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG 120 + D+ Q N + + + L +L + I ++ + Sbjct: 56 KRDLLQYFNDNIET-TEKKEPLETIGLQNILTSAGEHVLAAEKEVIKLGDIFISIYDEEQ 114 Query: 121 TLADI-LKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALK-----------KYTIDL 168 + A L+ G +I I + ED + + + +DL Sbjct: 115 SFASFFLRKQGIRRIDILNYITHGISATMFDYNIEEDSKYLVDEEDTQSVLNIGDFAVDL 174 Query: 169 TERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEV 228 T++A+ G +DP+IGR++ I RTIQVL RR KNNP+ +GEPGVGKTAI EGLA+ I+ +V Sbjct: 175 TQKAKMGDMDPLIGREDIIYRTIQVLSRRNKNNPIHVGEPGVGKTAITEGLAKLIVENKV 234 Query: 229 PEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGK 288 P LK ++ +LDMG+++AG KYRG+FE+R+K L + K++ ++ +IDE+HT++GAG Sbjct: 235 PNLLKDSKIYSLDMGSILAGTKYRGDFEDRIKNTLKKIQKEDKPIV-YIDEIHTIIGAGS 293 Query: 289 -ADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTI 347 + G++DA N+LKP L G++ +G+TT DEY++ EKD AL RRFQ++ V EPSVEDT Sbjct: 294 VSGGSLDAANILKPFLTSGKIKFIGSTTYDEYKKIFEKDRALARRFQRIEVPEPSVEDTY 353 Query: 348 AILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDS 407 +IL G+KE YE H+V + A+ +A LS +YI DR LPDKAID+IDE + +R+ Sbjct: 354 SILSGIKEHYEKFHNVIYKEEALKSAVDLSVKYINDRFLPDKAIDVIDETGAYVRLHSSD 413 Query: 408 KPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKA 467 + + I ++ +E+ D + ++ + +A + Sbjct: 414 DKKIV------IDKVHIEKTIAAMAKIPEQTLSQDETKVLKDLDKVLKKKVFGQEEAIDS 467 Query: 468 SLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLL 527 + + +A E + V L + GK E+ KQL A + + Sbjct: 468 LVRAIKRSRAGFN------EDNKTVASLLFVGPTGVGK-TEISKQLAKALNIP-----FI 515 Query: 528 RNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRV 570 R +++ + +AR G P + E L + ++ + V Sbjct: 516 RFDMSEYQEKHTVARLVGSPPGYVGYEEGGLLTDVIRKTPYCV 558 Score = 307 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 142/423 (33%), Positives = 231/423 (54%), Gaps = 14/423 (3%) Query: 432 ESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARR 491 E D A +R + E YS K + + E K A++ + + Sbjct: 330 EKDRALARRFQRIEVPEPSVEDTYS----ILSGIKEHYEKFHNVIYKEEALKSAVDLSVK 385 Query: 492 VGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRM 551 + + + I E + + + K + + I + +A IP + Sbjct: 386 YINDRFLPDKAIDVIDETGAYVRLHSSDDKKIV------IDKVHIEKTIAAMAKIPEQTL 439 Query: 552 MESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGK 611 + E + L +++ L +V GQ EA+D++ AI+RSRAG + N+ + S LF+GPTGVGK Sbjct: 440 SQDETKVLKDLDKVLKKKVFGQEEAIDSLVRAIKRSRAGFNEDNKTVASLLFVGPTGVGK 499 Query: 612 TELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPY 671 TE+ K LA + + +R DMSE+ EKH+V+RLVG+PPGYVGYEEGG LT+ +R+ PY Sbjct: 500 TEISKQLAKAL---NIPFIRFDMSEYQEKHTVARLVGSPPGYVGYEEGGLLTDVIRKTPY 556 Query: 672 SVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERF-G 730 V+LLDE+EKAHPDV NILLQ++D LTD G+ DF+NT +IMTSN G+ + + G Sbjct: 557 CVLLLDEIEKAHPDVLNILLQIMDYATLTDNTGKKTDFKNTTIIMTSNAGARSVGKALMG 616 Query: 731 ELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERG 790 + K+ + V+ F PEF NR+D+++ F+ + ++ +A+ + + K+L + Sbjct: 617 FGERIVKKDAISEEVNRIFSPEFRNRLDDIIYFNSMNDKMAYLVAKKVVGQFEKQLLSKD 676 Query: 791 YEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNE 850 +I+++D+ + LS+ G YGAR + R +QQ I+ ++L + + + ++V Sbjct: 677 IKINVTDKCYRWLSKKGVSLEYGAREIIRIVQQDIKPYFVDKVLFNDNIENTISIIDVEN 736 Query: 851 DRI 853 D I Sbjct: 737 DSI 739 >UniRef50_B8J0Q4 ATP-dependent Clp protease, ATP-binding subunit clpA n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J0Q4_DESDA Length = 832 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 175/553 (31%), Positives = 283/553 (51%), Gaps = 39/553 (7%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 L+ Q + DA A + + H++ AL N G + LL +G + LR + Sbjct: 2 LSKSVQSVIRDALMEAHRRRHDMLTVEHVLYALTNSMRGRI--LLEGSGASVAVLREQLE 59 Query: 66 QALNRLPQVEGTGG--DVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLA 123 NR +V G +V ++ + RVL + G + + +++ ++ + A Sbjct: 60 DFFNRELEVVPLAGKHEVAQTEGVQRVLERALGHIRAAGRDTVELGDLLISIMDEEESYA 119 Query: 124 DI-LKAAGATTANITQAIEQMRG----GESVNDQGAEDQRQA----LKKYTIDLTERAEQ 174 L+ G ++ + V+ G +++ A L +Y +DLT RA + Sbjct: 120 HYYLRKQGVERLDVLTFVSHGMDEGGGSRGVDQGGEGEEKDAKADPLAQYAVDLTARARE 179 Query: 175 GKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKG 234 GK+DP++GR+ E+ R ++VL RR KNNP+ +G+PGVGKTA+ EGLA RI+ +VPE Sbjct: 180 GKIDPLVGRENELDRAVEVLCRRRKNNPLFVGDPGVGKTALAEGLALRIVEDDVPEMFSN 239 Query: 235 RRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGK-ADGAM 293 ++ ALDMG L+AG +YRG+FE RLK V+ L K+ ILFIDE+HT+VGAG + G+M Sbjct: 240 AKLFALDMGLLLAGTRYRGDFESRLKAVVQRL-KELPEAILFIDEIHTIVGAGSTSGGSM 298 Query: 294 DAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGL 353 DA N+LKP LA GEL C+G+TT +E+R + EKD AL RRFQ++ + EPS E+ +AIL+GL Sbjct: 299 DASNLLKPVLASGELRCIGSTTYEEFRNHFEKDRALARRFQRIDLTEPSPEECLAILQGL 358 Query: 354 KERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELD 413 ++RY H V+ + A+ A L+ R++ DR LPDKAID++DE+ +++R+ + Sbjct: 359 EKRYADFHKVRYSTAAVKAMVDLTARHVRDRLLPDKAIDVMDESGAAVRLGRGVQGARAS 418 Query: 414 RLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQ 473 + + K K S ++ + ++ + E + Sbjct: 419 SGKKAVASGK-------KLPPLVSVGDVERIVARMAGIPVRTVSGTER--------NRLA 463 Query: 474 TIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTD 533 +++ +L++ + A EL I L + G + V Sbjct: 464 SLEKDLKELVFGQDAAI---------ELTVRAILRARAGLGQEQRPAGAFLFYGPTGVGK 514 Query: 534 AEIAEVLARWTGI 546 E+A LA+ G+ Sbjct: 515 TEVARSLAKLMGV 527 Score = 353 bits (905), Expect = 2e-95, Method: Composition-based stats. Identities = 158/410 (38%), Positives = 237/410 (57%), Gaps = 10/410 (2%) Query: 448 LSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIP 507 L E++Y++ + + A++ + A + ++ ++A V D + + + Sbjct: 355 LQGLEKRYADFH-KVRYSTAAVKAMVDLTARHVRDRLLPDKAIDVMDESGAAVRLGRGVQ 413 Query: 508 ELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELH 567 GK + L V+ ++ ++AR GIPV + +ER +L +E++L Sbjct: 414 GARASSGKKAVASGKKLPPL---VSVGDVERIVARMAGIPVRTVSGTERNRLASLEKDLK 470 Query: 568 HRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDE 627 V GQ+ A++ AI R+RAGL RP G+FLF GPTGVGKTE+ ++LA M Sbjct: 471 ELVFGQDAAIELTVRAILRARAGLGQEQRPAGAFLFYGPTGVGKTEVARSLAKLM---GV 527 Query: 628 AMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVF 687 +R DMSE+MEKH+VSRL+GAPPGYVG+++GG LTEAVR+ PYSV+LLDEVEKAHPD+F Sbjct: 528 EFLRYDMSEYMEKHAVSRLIGAPPGYVGFDQGGLLTEAVRKAPYSVVLLDEVEKAHPDIF 587 Query: 688 NILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE---RFGELDYAHMKELVLGV 744 N+LLQV+D LTD GR DF + V+IMTSN G+ + FG L Sbjct: 588 NVLLQVMDYATLTDNTGRKTDFSHVVLIMTSNAGAFDMSRPAMGFGGATRQDAAHKGLKA 647 Query: 745 VSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLS 804 V + F PEF NR+D +V F L E + I + + + LE+R + + +A + L+ Sbjct: 648 VENTFSPEFRNRLDALVPFGSLTEDMMLRIVDKFMAEIIESLEQRQVSLELGQKARQWLA 707 Query: 805 ENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIV 854 G+DP GARPL+R ++ ++E+ LA ++L G L G RL++ +D +V Sbjct: 708 RKGFDPTMGARPLRRLLRTELEDRLAHELLFGSLAKGGTARLDLVDDALV 757 >UniRef50_C4YJT6 Heat shock protein 78, mitochondrial n=1 Tax=Candida albicans RepID=C4YJT6_CANAL Length = 700 Score = 370 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 197/425 (46%), Positives = 279/425 (65%), Gaps = 9/425 (2%) Query: 148 SVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGE 207 + D R AL+K+ DLT+ A++GKLDPVIGRD EIRRTIQ+L RRTKNNPVLIG Sbjct: 75 QMQQTEQGDNRPALEKFGSDLTQLAKEGKLDPVIGRDHEIRRTIQILSRRTKNNPVLIGN 134 Query: 208 PGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLA 267 G GKTA++EGLAQRII GEVP+ +K ++++ LD+ +++GAKYRG+FE +LK +L ++ Sbjct: 135 AGTGKTAVMEGLAQRIIRGEVPDSMKDKQIITLDLAGIISGAKYRGDFESKLKSILKEVE 194 Query: 268 KQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDA 327 ++ GNVILFIDE H ++G GKA+G++DA N+LKPALARG+L GATT++EYR+Y+EKDA Sbjct: 195 EKNGNVILFIDEFHLLMGLGKAEGSIDASNLLKPALARGKLSMCGATTIEEYRKYVEKDA 254 Query: 328 ALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLP 387 AL RRF V V EP+VEDTI+ILRGLKERYE+HH V+I D A+V AA S+RYI DR LP Sbjct: 255 ALARRFSPVTVNEPTVEDTISILRGLKERYEVHHGVRIMDSALVTAALYSNRYITDRFLP 314 Query: 388 DKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEE 447 DKAIDL+DEA+S++R+Q +S+P+ + LDR+I+ +++E ++L KE D+ S R L +E Sbjct: 315 DKAIDLVDEASSTLRLQHESRPDAIATLDRQIMTIEIELESLRKEEDQLSIDRKHKLEKE 374 Query: 448 LS-DKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKI 506 L D + ++S L++A + E R + + GK Sbjct: 375 LELDMNILLRQSVVGQDEAIDAVSDAVR----LQRAGLTSEN-RPIASFMFLGPTGTGK- 428 Query: 507 PELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQEL 566 EL K L L ++R +++ + ++R G P + E +L + Sbjct: 429 TELTKSLAQF--LFNDKNAVVRFDMSEFQEKHTISRLIGSPPGYVGYEESGELTEAVRRK 486 Query: 567 HHRVI 571 + V+ Sbjct: 487 PYSVV 491 Score = 348 bits (892), Expect = 7e-94, Method: Composition-based stats. Identities = 152/315 (48%), Positives = 223/315 (70%), Gaps = 4/315 (1%) Query: 546 IPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLG 605 + + R + E+E L M L V+GQ+EA+DAVS+A+R RAGL NRPI SF+FLG Sbjct: 363 LSIDRKHKLEKELELDMNILLRQSVVGQDEAIDAVSDAVRLQRAGLTSENRPIASFMFLG 422 Query: 606 PTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEA 665 PTG GKTEL K+LA F+F+ A+VR DMSEF EKH++SRL+G+PPGYVGYEE G LTEA Sbjct: 423 PTGTGKTELTKSLAQFLFNDKNAVVRFDMSEFQEKHTISRLIGSPPGYVGYEESGELTEA 482 Query: 666 VRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLI 725 VRR+PYSV+L DE EKAHPD+ +LLQVLD+G LTD G+ +DF+NT+++MTSN+G +++ Sbjct: 483 VRRKPYSVVLFDEFEKAHPDLSKLLLQVLDEGSLTDSHGKKIDFKNTIIVMTSNIGQEIL 542 Query: 726 QERFGELD----YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKR 781 + + +K VL + H++ PEF+NRID++VVF+ L + + I I+L+ Sbjct: 543 LADKNTYEDGHINSEVKSQVLENLRHHYAPEFLNRIDDIVVFNRLSKTALKEILDIRLRE 602 Query: 782 LYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPG 841 + RL ++ + ++DEA LL + GYDP YGARPL R +++++ +PLA +++ G++ Sbjct: 603 IGDRLVDKRIILQLTDEAKTLLCDMGYDPTYGARPLNRVLRKKLLDPLAMRLIKGQVQEN 662 Query: 842 KVIRLEVNEDRIVAV 856 + +++EV + +I V Sbjct: 663 ETVKVEVKDHKIYVV 677 >UniRef50_B8BXC6 Member of the clp superfamily, regulatory gamma subunit n=1 Tax=Thalassiosira pseudonana RepID=B8BXC6_THAPS Length = 890 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 166/416 (39%), Positives = 242/416 (58%), Gaps = 16/416 (3%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M +R++ + +L AQ+ + + + ++++ L S GI + Sbjct: 71 MIFERMSEECIGSLVTAQNESARLGQSTVGCEVMTLGIIDRPEK-ARRTLKSYGITLRKA 129 Query: 61 R---TDINQALNRLPQV-----EGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFV 112 + IN PQ+ + ++ + L RVL +A ++SE + Sbjct: 130 KLTVETINNIFTMSPQLLNMNKKARDVELPFAPALKRVLTFAGAIADSLDSPTVNSEHVL 189 Query: 113 LAALES-RGTLADILKAAGATTANITQAIEQM--RGGESVNDQGAEDQRQALKKYTIDLT 169 LA +E T + +I E M G + V+ G E L + +DLT Sbjct: 190 LALMEGVDSTTFSAAEFCRRLVMDIKYPNEPMVGEGPQLVSGNGGELSTPTLSEVGVDLT 249 Query: 170 ERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVP 229 + A + +LDPV GRDEE+R ++ L RR KNNP L+GEPGVGKTAI EG+AQ + P Sbjct: 250 DLAARMELDPVHGRDEEVRAALRTLVRRRKNNPCLMGEPGVGKTAIAEGVAQILAA---P 306 Query: 230 EGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGN-VILFIDELHTMVGAGK 288 L+ R+++L++ LVAG KYRGEFEERL+ ++ ++ + ILFIDE+HT+VGAG Sbjct: 307 NMLRNHRIISLELANLVAGTKYRGEFEERLQAIVEEVTDERAPPTILFIDEIHTLVGAGS 366 Query: 289 ADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIA 348 A+G +DA NMLKPALARG+L +GATT+ EYR+YIEKDAALERR Q + V EP+++ T+ Sbjct: 367 AEGGIDAANMLKPALARGKLQVIGATTISEYRKYIEKDAALERRLQPLMVKEPTIDQTVQ 426 Query: 349 ILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQ 404 IL + E+Y HH V+ T ++VAAA LS RY+ DR LPDKAIDL+DEA +S+ ++ Sbjct: 427 ILEAIAEQYGAHHGVRYTPESLVAAAKLSERYVTDRFLPDKAIDLLDEAGASVHIE 482 Score = 349 bits (896), Expect = 2e-94, Method: Composition-based stats. Identities = 213/812 (26%), Positives = 358/812 (44%), Gaps = 98/812 (12%) Query: 82 QPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAGATTANITQAIE 141 + S++ + L + + G + + E+ L ++ LK+ G T +E Sbjct: 75 RMSEECIGSLVTAQNESARLGQSTVGCEVMTLGIIDRPEKARRTLKSYGITLRKAKLTVE 134 Query: 142 QMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIR---RTIQVLQRRT 198 + +++ Q +++ ++A +L + L T Sbjct: 135 TINNIFTMSPQL------------LNMNKKARDVELPFAPALKRVLTFAGAIADSLDSPT 182 Query: 199 KNN--PVLIGEPGVGKTAIV-----EGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKY 251 N+ +L GV T L I P +G ++++ + G L Sbjct: 183 VNSEHVLLALMEGVDSTTFSAAEFCRRLVMDIKYPNEPMVGEGPQLVSGNGGEL--STPT 240 Query: 252 RGEFEERLKGVLN--DLAKQEGNVILFIDELHTMVGAGKADGA-MDAGNMLKPALARGEL 308 E L + +L G L T+V K + M + K A+A G Sbjct: 241 LSEVGVDLTDLAARMELDPVHGRDEEVRAALRTLVRRRKNNPCLMGEPGVGKTAIAEGVA 300 Query: 309 HCVGATTLDEYRQYIEKDAA-----------LERRFQKVFVAEPSVEDTIAILRGLKERY 357 + A + + I + A E R Q + V E + E + + E + Sbjct: 301 QILAAPNMLRNHRIISLELANLVAGTKYRGEFEERLQAI-VEEVTDERAPPTILFIDEIH 359 Query: 358 ELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDR 417 L + I AA +++ A + ++Q+ + Sbjct: 360 TLV-GAGSAEGGIDAA------------------NMLKPALARGKLQVIGATTISEYRKY 400 Query: 418 RIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEW--KAEKASLSGTQTI 475 +E+ A ++ + + +++ + E + + SL + Sbjct: 401 ------IEKDAALERRLQPLMVKEPTIDQTVQILEAIAEQYGAHHGVRYTPESLVAAAKL 454 Query: 476 KAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAE 535 + ++A + D A S + +VTD + Sbjct: 455 SERYVTDRFLPDKAIDLLDEAGAS--------------VHIEHAFNPSGSTNTPEVTDQD 500 Query: 536 IAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPN 595 I+ ++++WT IP+ ++ +E LL +E L RV GQ A+ +++ A+RR+R+GL D Sbjct: 501 ISSIISQWTNIPIGKLTSTESSTLLTLESSLASRVKGQERAIKSIARAVRRARSGLRDAG 560 Query: 596 RPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVG 655 RP+ SFLF G TGVGKT L K+LA + S++ MVRIDMSE+MEKH+ SRL G PPGYVG Sbjct: 561 RPVASFLFCGSTGVGKTWLAKSLAAQYYGSEKDMVRIDMSEYMEKHTASRLTGPPPGYVG 620 Query: 656 YEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVI 715 YEEGG LTEAVRR P+SV+LLDE+EKAH DV N+LLQV++DG LTDG+GRT+ F+N +++ Sbjct: 621 YEEGGQLTEAVRRAPHSVVLLDEIEKAHRDVLNVLLQVMEDGVLTDGKGRTICFKNVILV 680 Query: 716 MTSNLGSDLIQERFGEL---------------DYAHMKELVLGVVSHNFRPEFINRIDEV 760 MTSN+GS I E DYA + E+V ++ +PE +NRIDE+ Sbjct: 681 MTSNVGSAKIMELVNGDAGEFDSDTTSLDAAEDYAALSEVVQEELTKEMKPELLNRIDEI 740 Query: 761 VVFHPLGEQHIASIAQIQLK-RLYKRLEERGYEIHISDEALKLLSENGYD--PVYGARPL 817 +VF PLG++++ IA+ + + + +ER + SD + + +G +GARP+ Sbjct: 741 IVFSPLGDENLRDIAKAIVDASIERAFKERSITLSASDSLIDAVVMDGSMNAAEFGARPM 800 Query: 818 KRAIQQQIENPLAQQILSGELVPGKVIRLEVN 849 +RA Q+ E+ ++ I+ G L +++ Sbjct: 801 RRAAQRLFEDAVSDAIVRGFLQEDDHATVDMG 832 >UniRef50_C3XML9 Endopeptidase subunit Clp ATP-binding A n=1 Tax=Helicobacter winghamensis ATCC BAA-430 RepID=C3XML9_9HELI Length = 756 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 171/483 (35%), Positives = 263/483 (54%), Gaps = 19/483 (3%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAG----QLR 61 ++ + + L +AQ A ++++ H+ ALL E ++ L G N Q++ Sbjct: 4 ISKELNVVLQNAQKEAKDKGHEYLTLEHIFYALLENEK--ITKTLQDCGGNVEIMKKQIQ 61 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGT 121 + Q L P+ + G Q + + RV+ + + + A LE Sbjct: 62 RYLKQFLQSYPERQEQGAMPQETLAVTRVIEIMIGHVKGSQRQQAQVSDLLAAILEEEKA 121 Query: 122 L-ADILKAAGATTANITQAIEQMRGGESVND-------QGAEDQRQALKKYTIDLTERAE 173 A IL A G T N+ + I + + S N E + AL+ Y +LT+ A Sbjct: 122 FCAQILNAQGITRLNVLEYITENQENFSFNKSIKEEVKDEGEKRESALEAYCTNLTQMAR 181 Query: 174 QGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLK 233 +GK++P+IGR+ EIRR +VL R+ KNNP+L+GEPGVGKTA+ EGLA ++I + P L+ Sbjct: 182 EGKIEPLIGREVEIRRCFEVLLRKKKNNPLLVGEPGVGKTAVAEGLALQMIATQSP--LE 239 Query: 234 GRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKAD-GA 292 + L+MGALVAG KYRG+FE+R+K + +++ + GNVILFIDE+H ++GAG + G+ Sbjct: 240 NTEMYMLNMGALVAGTKYRGDFEKRIKTLTDEVLE-LGNVILFIDEIHMLIGAGATNSGS 298 Query: 293 MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRG 352 MDA N+LKP L G+L C+GA+T EYR +++KD AL RRF K+ V EPS E++I IL G Sbjct: 299 MDASNLLKPMLGNGKLRCIGASTYAEYRSFLDKDKALSRRFAKIEVKEPSREESILILEG 358 Query: 353 LKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEEL 412 +K+ YE +H+V AI LS R++ DR LPDKAID++DE +S ++ S L Sbjct: 359 VKKHYEKYHNVSFNSEAIELIVDLSIRHLHDRFLPDKAIDIMDEVGASYKLDGKSGKVSL 418 Query: 413 DRLDRRIIQL-KLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSG 471 + + + + K+ + K+ K L + ++ E+ K KA L Sbjct: 419 QSIKKMVATMAKIPEIEATKDDKAVLKGLEKHLKSRIFGQDNAIVEVVSALKRNKAGLGA 478 Query: 472 TQT 474 Sbjct: 479 PNK 481 Score = 317 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 142/409 (34%), Positives = 228/409 (55%), Gaps = 15/409 (3%) Query: 446 EELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGK 505 ++ KE E + K + E ++ ++ + R K Sbjct: 340 AKIEVKEPSREESILILEGVKKHYEKYHNVSFNSEAIELIVDLSIR----HLHDRFLPDK 395 Query: 506 IPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQE 565 ++ ++ A+ +L+GK+ KV+ I +++A IP + ++ L +E+ Sbjct: 396 AIDIMDEVGASYKLDGKS-----GKVSLQSIKKMVATMAKIPEIEATKDDKAVLKGLEKH 450 Query: 566 LHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDS 625 L R+ GQ+ A+ V +A++R++AGL PN+PIGSFLF GP+GVGKTEL K LA + Sbjct: 451 LKSRIFGQDNAIVEVVSALKRNKAGLGAPNKPIGSFLFSGPSGVGKTELAKELAKAL--- 507 Query: 626 DEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPD 685 + R+DMSE+ME+ S S+L+GA GYVGYE+GG LTE +++ P++++LLDEVEKAHPD Sbjct: 508 NINFERLDMSEYMERISSSQLIGAAAGYVGYEKGGILTEMIKKNPHTLLLLDEVEKAHPD 567 Query: 686 VFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVV 745 V N+ LQV+D GRLTD G ++DF + ++I+TSN+GS + D + Sbjct: 568 VLNVFLQVMDYGRLTDNNGESIDFSSVILILTSNVGSKEAPVLGFKQDT---NLRFSSAI 624 Query: 746 SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSE 805 +F PEF NR+D ++ F+PL + I I + L ++ E+ EI + + + L++ Sbjct: 625 KDHFSPEFRNRLDAIIAFNPLSHKEILKIVDKNIVDLNNQILEKKVEIILDKSSKEYLAK 684 Query: 806 NGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIV 854 G+D GARPL IQ++I+N L+ +L GEL G V + ++ Sbjct: 685 IGFDVELGARPLGLVIQKEIKNILSDAMLFGELSKGGVAHFTCVKGKLT 733 >UniRef50_Q73KU3 ATP-dependent Clp protease, ATP-binding subunit ClpA n=1 Tax=Treponema denticola RepID=Q73KU3_TREDE Length = 785 Score = 366 bits (939), Expect = 2e-99, Method: Composition-based stats. Identities = 179/588 (30%), Positives = 291/588 (49%), Gaps = 41/588 (6%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M ++ + DA A +++F+ P HL+ A++ L T +G + G + Sbjct: 1 MNFT-VSLTVRRIFQDAVEDAKKRNHEFVTPEHLLWAIMFNPK--ALELFTLSGSDLGYI 57 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQD--LVRVLNLCDKLAQKRGDNFISSELFVLAAL-E 117 ++N L V +P Q L V I +++ + E Sbjct: 58 HDNLNTYLENKVPVRTQDNQAEPIQTVGLQNVFERAILNCNAAEKPVIGINDIIVSLMDE 117 Query: 118 SRGTLADILKAAGATTANITQAIEQM------------------------------RGGE 147 + + +K +G + Q + E Sbjct: 118 EKNHCSFFMKQSGIDRLRLLQLVSSPDFYDDGKNRSAYEEAEDVQEAQGVKEDSARHNSE 177 Query: 148 SVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGE 207 N ++ Q+ L+++T++LTE+A +G+L P+IGR+EEI RTIQ+L R+ KNNP+ +G Sbjct: 178 EKNTDKSKAQKTYLERFTVNLTEKARKGRLSPIIGREEEIERTIQILCRKQKNNPIHVGG 237 Query: 208 PGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLA 267 GVGKTAI EGLAQRI +VP LK + +L + L+AGAK+RG+FEERLK ++++++ Sbjct: 238 AGVGKTAITEGLAQRITANKVPSFLKNANIYSLSLSDLLAGAKFRGDFEERLKRIVSEIS 297 Query: 268 KQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDA 327 +++ N ILFIDE+HT+V A G ++A ++LKP LA G++ C+GATT +EY ++ KDA Sbjct: 298 REK-NAILFIDEIHTIVNANSGGGGIEAPDLLKPILANGKVRCIGATTFEEYNKHFTKDA 356 Query: 328 ALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLP 387 AL RRFQK+ + EP+ E+ + IL+GL+E YE H V +D + +A LS +I DR LP Sbjct: 357 ALARRFQKIDIEEPNEEEAVKILKGLRESYENFHKVHYSDEVLESAVHLSAIHIRDRFLP 416 Query: 388 DKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEE 447 DKAIDLIDEA + I+++ D + E + ++ + + L + +L +K Sbjct: 417 DKAIDLIDEAGALIKIRADKEKNENEADEKGLEETALPEVSLSDIDKIVAKTAKIPEQRV 476 Query: 448 LSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIP 507 ++ + EE + G T + +A R D + L G Sbjct: 477 SVNETEKLRHFEEILSK---KIFGQDTAIEGVTKAVKRSRAGFRSKDKPVANFLFVGPTG 533 Query: 508 ELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESE 555 + +L A T E + LLR +++ + ++R G P + E Sbjct: 534 VGKTEL-AKTLAEELGIPLLRFDMSEYQEKHTVSRLIGSPPGYVGFEE 580 Score = 325 bits (832), Expect = 6e-87, Method: Composition-based stats. Identities = 149/441 (33%), Positives = 235/441 (53%), Gaps = 10/441 (2%) Query: 417 RRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476 R I E+ D A +R ++ E E + ++ + + + Sbjct: 338 RCIGATTFEEYNKHFTKDAALARRFQKIDIE-EPNEEEAVKILKGLRESYENFHKVHYSD 396 Query: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPEL-----EKQLEAATQLEGKTMRLLRNKV 531 LE A R L + + L +K+ E +V Sbjct: 397 EVLESAVHLSAIHIRDRFLPDKAIDLIDEAGALIKIRADKEKNENEADEKGLEETALPEV 456 Query: 532 TDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGL 591 + ++I +++A+ IP R+ +E EKL E+ L ++ GQ+ A++ V+ A++RSRAG Sbjct: 457 SLSDIDKIVAKTAKIPEQRVSVNETEKLRHFEEILSKKIFGQDTAIEGVTKAVKRSRAGF 516 Query: 592 ADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPP 651 ++P+ +FLF+GPTGVGKTEL K LA + ++R DMSE+ EKH+VSRL+G+PP Sbjct: 517 RSKDKPVANFLFVGPTGVGKTELAKTLAEEL---GIPLLRFDMSEYQEKHTVSRLIGSPP 573 Query: 652 GYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRN 711 GYVG+EEGG LT AV++ P +V+LLDE+EKAH D++NILLQ++D LTD QGR F N Sbjct: 574 GYVGFEEGGLLTSAVQKSPNAVLLLDEIEKAHADIYNILLQIMDYATLTDNQGRKAAFNN 633 Query: 712 TVVIMTSNLGSDLIQERFGELDYAHMKE-LVLGVVSHNFRPEFINRIDEVVVFHPLGEQH 770 ++IMTSN GS I + + E V V F PEF NR+D ++ F PL Q Sbjct: 634 IILIMTSNAGSSNIGKPLIGFGGERISESAVDEAVEKTFTPEFRNRLDAIIKFGPLTMQV 693 Query: 771 IASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLA 830 ++ I + +++++ +L E+ + + D+ + LL+E GY +GAR R ++ + PL Sbjct: 694 MSLIIKKEVEKIRSQLAEKEISLELEDDVIPLLAEKGYSEEFGARNAARLVEDEFVTPLT 753 Query: 831 QQILSGELVPGKVIRLEVNED 851 IL GE G ++ ++ + Sbjct: 754 DMILFGETKKGSSVKCQIGDK 774 >UniRef50_P05444 ClpA homolog protein n=766 Tax=cellular organisms RepID=CLPA_RHOBL Length = 793 Score = 365 bits (936), Expect = 5e-99, Method: Composition-based stats. Identities = 188/555 (33%), Positives = 284/555 (51%), Gaps = 45/555 (8%) Query: 24 HDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQALN---RLPQVEGTGGD 80 ++ HL+ AL+++ + ++ + ++ L+ + ++ G + Sbjct: 43 RRHELATLEHLLLALIDEP--DAARVMKACSVDLEDLKKTLTDFIDDDLSTLVTSVEGSE 100 Query: 81 VQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL-ESRGTLADILKAAGATTANITQA 139 P+ RV+ Q G ++ ++A E A L+ T + Sbjct: 101 AVPTAAFQRVIQRAAIHVQSSGRTEVTGANVLVAIFAERESNAAYFLQEQDMTRYDAVNF 160 Query: 140 IEQM-----------------RGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIG 182 I E+ + E + AL KY +DL +A +G +DP+IG Sbjct: 161 IAHGVAKDPSYGESRPVQGADEPQETPKAEAGEAKESALSKYCVDLNIKARKGDVDPLIG 220 Query: 183 RDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDM 242 R+ E+ R IQVL RR KNNP+L+G+PGVGKTAI EGLA +II EVPE L G + +LDM Sbjct: 221 REAEVERAIQVLCRRRKNNPLLVGDPGVGKTAIAEGLAWKIIKKEVPEVLSGATIFSLDM 280 Query: 243 GALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGK-ADGAMDAGNMLKP 301 GAL+AG +YRG+FEERLK V+ +L + ILFIDE+HT++GAG + GAMDA N+LKP Sbjct: 281 GALLAGTRYRGDFEERLKAVVKELEDHP-DAILFIDEIHTVIGAGATSGGAMDASNLLKP 339 Query: 302 ALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHH 361 AL G+L C+G+TT E+RQ+ EKD AL RRFQK+ V EPSV D I IL GLK +E HH Sbjct: 340 ALQGGKLRCMGSTTYKEFRQHFEKDRALSRRFQKIDVNEPSVPDAIKILMGLKPHFEEHH 399 Query: 362 HVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQ 421 ++ T AI +A L+ RYI DR+LPD AID+IDEA ++ + DSK ++++ Sbjct: 400 ELRYTADAIKSAVELASRYINDRKLPDSAIDVIDEAGAAQHLVSDSK-------RKKVLG 452 Query: 422 LKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQ 481 K + + K + + E L D ER + + + A ++ Sbjct: 453 TKEIEAVVAKIARIPPRNVSKDDAETLRDLERTLK------RLVFGQDKAIEALSASIKL 506 Query: 482 AKIAIEQARR-VGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVL 540 A+ + + + +G+ GK E+ KQL A +E LLR +++ + Sbjct: 507 ARAGLREPEKPIGNYLFTGPTGVGK-TEVAKQLAATLGVE-----LLRFDMSEYMEKHAV 560 Query: 541 ARWTGIPVSRMMESE 555 +R G P + + Sbjct: 561 SRLIGAPPGYVGFDQ 575 Score = 359 bits (922), Expect = 2e-97, Method: Composition-based stats. Identities = 164/423 (38%), Positives = 245/423 (57%), Gaps = 13/423 (3%) Query: 432 ESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARR 491 E D A +R ++ E + + K ++ + K A+E A R Sbjct: 362 EKDRALSRRFQKIDVN----EPSVPDAIKILMGLKPHFEEHHELRYTADAIKSAVELASR 417 Query: 492 VGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRM 551 + ++ + I E AA L + R + + EI V+A+ IP + Sbjct: 418 YINDRKLPDSAIDVIDEA----GAAQHLVSDSKR--KKVLGTKEIEAVVAKIARIPPRNV 471 Query: 552 MESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGK 611 + + E L +E+ L V GQ++A++A+S +I+ +RAGL +P +PIG++LF GPTGVGK Sbjct: 472 SKDDAETLRDLERTLKRLVFGQDKAIEALSASIKLARAGLREPEKPIGNYLFTGPTGVGK 531 Query: 612 TELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPY 671 TE+ K LA + ++R DMSE+MEKH+VSRL+GAPPGYVG+++GG LT+ V + P+ Sbjct: 532 TEVAKQLAATL---GVELLRFDMSEYMEKHAVSRLIGAPPGYVGFDQGGMLTDGVDQHPH 588 Query: 672 SVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGE 731 V+LLDE+EKAHPDV+NILLQV+D G+LTD GR VDFRN ++IMTSN+G+ + + Sbjct: 589 CVLLLDEIEKAHPDVYNILLQVMDHGKLTDHNGRAVDFRNVILIMTSNVGAADMAKEAIG 648 Query: 732 LDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGY 791 V F PEF NR+D V+ F PLG + I + + + +L +L +R Sbjct: 649 FGRERRTGEDTAAVERTFTPEFRNRLDAVISFAPLGREIILQVVEKFVLQLEAQLIDRNV 708 Query: 792 EIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNED 851 I ++ EA L E GYD GARPL R IQ+ I+ PLA+++L G+L G ++++ V +D Sbjct: 709 HIELTPEAAAWLGEKGYDDKMGARPLGRVIQEHIKKPLAEELLFGKLTKGGLVKVGVKDD 768 Query: 852 RIV 854 IV Sbjct: 769 AIV 771 >UniRef50_Q4U8P5 Endopeptidase (CLP homologue) ATP-binding chain, putative n=2 Tax=Theileria RepID=Q4U8P5_THEAN Length = 916 Score = 365 bits (936), Expect = 5e-99, Method: Composition-based stats. Identities = 161/428 (37%), Positives = 241/428 (56%), Gaps = 15/428 (3%) Query: 443 MLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQ 502 +E +YS+ + + + E R +L +E + Sbjct: 465 EYTQESIKLALKYSKQYINDRFLPDKAIDIMDESGSFAKIQYQNELKREKNELTSATETE 524 Query: 503 YGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRM 562 E + E +E K +L +V +AEV++ WTGIP+ ++ E E + M Sbjct: 525 GNGETESNPENEVEQVVEKKEQNVL-GQVKPEHVAEVMSIWTGIPLKKLTRGEMEIIRNM 583 Query: 563 EQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFM 622 E++LH VIGQ EAV V AIRR++ + +PNRPIGSFLF GP GVGK+E+ +AL ++ Sbjct: 584 EEDLHKMVIGQEEAVKNVCKAIRRAKTNIKNPNRPIGSFLFCGPPGVGKSEVARALTKYL 643 Query: 623 FDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKA 682 F + E ++RIDMSE+ E HS+SR++G+PPGY G++ GG LTE V+ PYSV++ DE+EKA Sbjct: 644 F-AKENLIRIDMSEYTEPHSISRILGSPPGYKGHDTGGQLTEKVKSNPYSVVMFDEIEKA 702 Query: 683 HPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGEL---------- 732 H DV NILLQ+L+DG+LTD + +T+ F+NT++IMTSN GS++IQ + Sbjct: 703 HHDVLNILLQILEDGKLTDSKNQTISFKNTIIIMTSNTGSNVIQRSSKGVHTFGFTVDSD 762 Query: 733 ---DYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEER 789 DY +K LV+ + +F PE INRID+V++F PL E + IA++ L L R Sbjct: 763 ESSDYLKIKALVMEELKSHFLPELINRIDDVILFKPLSESELKEIAKLMLNDLTARANSA 822 Query: 790 GYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVN 849 G I IS++ + + D GARPL+R I +E+ LA ++S + + V+ Sbjct: 823 GILIEISEKFADYILKLPRDDKSGARPLRRLITSVLEDKLADLVISDDFDSNNTYTVTVD 882 Query: 850 EDRIVAVQ 857 E V + Sbjct: 883 EADSVVIN 890 Score = 344 bits (883), Expect = 7e-93, Method: Composition-based stats. Identities = 165/579 (28%), Positives = 263/579 (45%), Gaps = 41/579 (7%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 + D ++ L + A + +E H+ L+ G +L G+ Sbjct: 69 LNFDNFSDNAIKVLMLSLEEAKLSNQPSVESAHIFQGLVCLNQGLAFKILKEFGVTVNSA 128 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESR- 119 R + + + + S L+ A++ G++ I +E +L L Sbjct: 129 RNAAKSS-YPVDESKKVKNLPTFSNSAKNALDYSSTEAERLGNSTIETEHLLLGVLNDTT 187 Query: 120 GTLADILKAAGATT-----------ANITQAIEQMRGGESVNDQGAE-------DQRQAL 161 ++ K I + E E++ + R L Sbjct: 188 KEMSTFYKNLDLDVTLAIDTTVRTIEKIKEIKESNSLSENIQESSPNFVYLSPTMNRDEL 247 Query: 162 KK-----YTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIV 216 + +T+DLTE+A G+L VI RD EI R I L R TK+NP+L+GEPGVGKTAIV Sbjct: 248 AQSCISLFTVDLTEKARNGQLPKVIHRDNEIERAIITLSRMTKSNPLLVGEPGVGKTAIV 307 Query: 217 EGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILF 276 EG+A +I G + +R+L L G L+AG K+RG+FEERL +++++ K G++IL Sbjct: 308 EGIANKISQGISQPQISKKRILQLQFGLLIAGTKFRGQFEERLTKLIDEI-KSSGDIILV 366 Query: 277 IDELHTMVG-----------AGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEK 325 IDE H ++G AG DG++DA N+LKP L+RGE+ C+ TT EY++Y EK Sbjct: 367 IDEAHMLIGMKFIYNNNKLGAGAGDGSIDAANLLKPPLSRGEIQCIAITTPKEYKKYFEK 426 Query: 326 DAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQ 385 D AL RRF ++V EPS EDT+ IL G+ Y H V+ T +I A S +YI DR Sbjct: 427 DMALSRRFHPIYVDEPSEEDTLKILNGISSSYGEFHGVEYTQESIKLALKYSKQYINDRF 486 Query: 386 LPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLN 445 LPDKAID++DE+ S ++Q EL R + + ES+ ++ + Sbjct: 487 LPDKAIDIMDESGSFAKIQY---QNELKREKNELTSATETEGNGETESNPENEVEQVVEK 543 Query: 446 EELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARR-VGDLARMSELQYG 504 +E + + E E + + + + E+E + E + V + Sbjct: 544 KEQNVLGQVKPEHVAEVMSIWTGIPLKKLTRGEMEIIRNMEEDLHKMVIGQEEAVKNVCK 603 Query: 505 KIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARW 543 I + ++ + G + V +E+A L ++ Sbjct: 604 AIRRAKTNIKNPNRPIGSFLFCGPPGVGKSEVARALTKY 642 >UniRef50_A3DES0 ATP-dependent Clp protease ATP-binding subunit ClpA n=4 Tax=Clostridium RepID=A3DES0_CLOTH Length = 776 Score = 364 bits (935), Expect = 7e-99, Method: Composition-based stats. Identities = 175/516 (33%), Positives = 276/516 (53%), Gaps = 51/516 (9%) Query: 5 RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDI 64 RL + L A + A ++F P H++ A L + G ++ + G ++ D+ Sbjct: 3 RLDDVANKILIAAYNEAKHQKHEFFTPEHILYASLFFDEG--RDIIENCGGKVEDIKKDL 60 Query: 65 NQAL-NRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL-ESRGTL 122 + N +P VE + S + V+ G +I ++A E Sbjct: 61 LEFFRNNMPIVEN--HEPIESLGINSVMQATAYQCIAAGREYIRIGDIIVALYGEKESFA 118 Query: 123 ADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQA---------------------- 160 + IL+ G ++ + I N + + + Sbjct: 119 SYILQKNGIKKLDVLKYISHGVSLVPKNMETSLKSLETDTYLEAYQYADDWEYDYEYEDI 178 Query: 161 ----------------LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204 L+ +TIDLTE+A +GK+DP+IGR++ + RTIQVL RR KNNP+ Sbjct: 179 DEDEDIDEESSSKSNFLEHFTIDLTEKARKGKIDPLIGREDILERTIQVLSRRLKNNPIH 238 Query: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264 +G+PGVGKTAI EGLA+ I+ +VP+ LKG ++ LDMG+++AG KYRG+FEER+K VLN Sbjct: 239 VGDPGVGKTAITEGLARLIVEDKVPKSLKGSKIYYLDMGSMLAGTKYRGDFEERIKKVLN 298 Query: 265 DLAKQEGNVILFIDELHTMVGAGK-ADGAMDAGNMLKPALARGELHCVGATTLDEYRQYI 323 ++ Q I++IDE+HT+VGAG +DGAMDA N++KP L +G L +G+TT +EY++Y Sbjct: 299 EIQNQP-KAIVYIDEIHTIVGAGAVSDGAMDASNIIKPFLTQGTLRFIGSTTYEEYKKYF 357 Query: 324 EKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIAD 383 EKD AL RRFQK+ V EPS++DT IL+GLK+RYE +H V+ TD A+ AA LS +YI D Sbjct: 358 EKDRALSRRFQKIDVPEPSIDDTFKILKGLKDRYEEYHKVKYTDSALRLAAELSAKYIQD 417 Query: 384 RQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQL-----KLEQQALMKESDEASK 438 R LPDKAID+IDE + +R+ + + + ++ I + ++ Q++ ++ K Sbjct: 418 RHLPDKAIDVIDETGAYVRLHAKDEDKVITIKNKDIERTVSAIARIPIQSVSRDEISKLK 477 Query: 439 KRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQT 474 L + +++ + + K +A + + Sbjct: 478 NLDVKLKSTIFGQDKAIDTVVQAIKRSRAGFNENEK 513 Score = 338 bits (867), Expect = 5e-91, Method: Composition-based stats. Identities = 144/438 (32%), Positives = 234/438 (53%), Gaps = 13/438 (2%) Query: 417 RRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476 R I E+ E D A +R ++ E + + K K +K Sbjct: 343 RFIGSTTYEEYKKYFEKDRALSRRFQKIDVP----EPSIDDTFKILKGLKDRYEEYHKVK 398 Query: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 536 ++A E + + + + I E + + E K + + + +I Sbjct: 399 YTDSALRLAAELSAKYIQDRHLPDKAIDVIDETGAYVRLHAKDEDKVI-----TIKNKDI 453 Query: 537 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNR 596 ++ IP+ + E KL ++ +L + GQ++A+D V AI+RSRAG + + Sbjct: 454 ERTVSAIARIPIQSVSRDEISKLKNLDVKLKSTIFGQDKAIDTVVQAIKRSRAGFNENEK 513 Query: 597 PIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGY 656 P+ S LF+GPTGVGKTEL K L+ + +R DMSE+ EKH+VSRL+GAPPGYVGY Sbjct: 514 PVASLLFVGPTGVGKTELAKQLSLHL---GIPFIRFDMSEYQEKHTVSRLIGAPPGYVGY 570 Query: 657 EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 716 EEGG LT+A+R+ P+ V+LLDE+EKAHPD++N+LLQV+D LTD G+ DFRN ++IM Sbjct: 571 EEGGLLTDAIRKTPHCVLLLDEIEKAHPDIYNVLLQVMDYAVLTDNNGKKADFRNVILIM 630 Query: 717 TSNLGSDLIQERFGELDYAHMKELVL-GVVSHNFRPEFINRIDEVVVFHPLGEQHIASIA 775 TSN G+ + D ++ + V F PEF NR+D++VVF+ + E+ I Sbjct: 631 TSNAGAREVGRTLIGFDSRNVDRSAMTKEVERIFSPEFRNRLDDIVVFNHINEEMALLIT 690 Query: 776 QIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILS 835 + + + ++L+ + ++ +++ K +++ G +YGAR + R +Q +I+ ++L Sbjct: 691 KKAINQFKEKLKTKNIKLKVTERCCKWIAQKGLSSIYGAREILRYVQDKIKTYFVDEVLF 750 Query: 836 GELVPGKVIRLEVNEDRI 853 GEL G ++V + I Sbjct: 751 GELSKGGTAIIDVVDGEI 768 >UniRef50_C6V4H7 ATP-dependent Clp protease, ATP-binding subunit ClpA n=2 Tax=Neorickettsia RepID=C6V4H7_NEORI Length = 740 Score = 363 bits (932), Expect = 1e-98, Method: Composition-based stats. Identities = 170/499 (34%), Positives = 262/499 (52%), Gaps = 24/499 (4%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 ++ + L +A LA + ++ HL+ AL E VS + +++ +N +LR + Sbjct: 2 ISPSLENTLQNALVLARSFSHSYVTLEHLLLALTEDEE--VSRIASNSSMNFAKLRDSLI 59 Query: 66 QALN------RLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL-ES 118 L+ R ++P+ L RV+ A I+ ++ E Sbjct: 60 HFLSTAQFFARFSNGCVDIAKIKPTLGLRRVIQRTKIHANIAELGQITGLHVLIELFCEQ 119 Query: 119 RGTLADILKAAGATTANITQAIEQMRGG-------ESVNDQGAEDQRQALKKYTIDLTER 171 L + T + + + S D LK+Y D+ E Sbjct: 120 DSYAFSFLTESNITLVELMSHVMRSHKCGSTQSTSTSNTDILRSADLDNLKEYCTDMNEL 179 Query: 172 AEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEG 231 A QGK+D +I R +EI RTI++L RRTKNNP+ +GEPGVGKTAIVEGL I++G VP+ Sbjct: 180 AIQGKIDKLIDRKKEIERTIEILLRRTKNNPIYVGEPGVGKTAIVEGLVHAIVSGNVPQK 239 Query: 232 LKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGK-AD 290 LK RV AL +G+L+AG +YRG+FEER++ V+N+++ + N ILFIDE+HT+VGAG ++ Sbjct: 240 LKNTRVYALKIGSLLAGTRYRGDFEERIRTVMNEISSSK-NTILFIDEIHTIVGAGSTSN 298 Query: 291 GAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAIL 350 G++DAGN+LKP L +G L C+GATT EY + EKDAAL+RRFQ++ + EPS+ DT+ I+ Sbjct: 299 GSIDAGNLLKPFLTKGPLRCIGATTYREYSTHFEKDAALDRRFQRIEIEEPSISDTLNII 358 Query: 351 RGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPE 410 G K YE H V T ++ L+HRYI +R PDKAIDL+D+ +S ++ Sbjct: 359 DGTKSYYEDFHRVHYTKASLNEIVNLAHRYIPNRSFPDKAIDLMDDLGASYNAEL----F 414 Query: 411 ELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLS 470 ++ + R I +K ++ L K + + + E L+ ER + + Sbjct: 415 DVKKRRDRKIDIKYVRETLAKRFNIPVAQLNYTVEEILTSLERNLK--TAIFDQDNVIEQ 472 Query: 471 GTQTIKAELEQAKIAIEQA 489 +++ L K A Sbjct: 473 VVYSLRPGLLGLKGEKPLA 491 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 129/462 (27%), Positives = 223/462 (48%), Gaps = 38/462 (8%) Query: 394 IDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKER 453 + ++ + + E+ LDRR ++++E+ ++ + + D + Sbjct: 316 LRCIGATTYREYSTHFEKDAALDRRFQRIEIEEPSISDTLN-------------IIDGTK 362 Query: 454 QYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQL 513 Y E KASL+ + + ++A + D L Sbjct: 363 SYYEDFHRVHYTKASLNEIVNLAHRYIPNRSFPDKAIDLMD-----------------DL 405 Query: 514 EAATQLEGKTMRLLRN-KVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIG 572 A+ E ++ R+ K+ + E LA+ IPV+++ + E L +E+ L + Sbjct: 406 GASYNAELFDVKKRRDRKIDIKYVRETLAKRFNIPVAQLNYTVEEILTSLERNLKTAIFD 465 Query: 573 QNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRI 632 Q+ ++ V ++R GL +P+ S+LF G TGVGKTEL K +A + VRI Sbjct: 466 QDNVIEQVVYSLRPGLLGLKGE-KPLASYLFGGSTGVGKTELAKQIAKNLC---MQFVRI 521 Query: 633 DMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQ 692 DMSE+ME H+VSRL+GAPPGYVG+++G ++ E + ++ S+IL DE+EKAH D NILLQ Sbjct: 522 DMSEYMEGHAVSRLIGAPPGYVGHDKGSFIAEILFKQGSSLILFDEIEKAHADFQNILLQ 581 Query: 693 VLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPE 752 +LD G +TD G+ F+N +++ T+N+GS I+ K + F E Sbjct: 582 ILDYGCITDSTGKKSRFKNCIMVCTTNVGSTFIENNSLGFTQDGKKTGKEAQFASFFNKE 641 Query: 753 FINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVY 812 ++R+D +VF+ L + + I + LEERG ++ ++DE +K L Sbjct: 642 LLDRLDLAIVFNTLDKNSVEKIINKSATEIRALLEERGIKLSLTDEVVKSLVARHSSGKI 701 Query: 813 GARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIV 854 AR ++R I+ I ++ ++L + I L + + +V Sbjct: 702 SARTIERTIRNDIMQAVSDRMLRSKTSE---IELTIKDGCLV 740 >UniRef50_Q2GGQ4 ATP-dependent Clp protease, ATP-binding subunit ClpA n=26 Tax=Proteobacteria RepID=Q2GGQ4_EHRCR Length = 765 Score = 362 bits (930), Expect = 3e-98, Method: Composition-based stats. Identities = 176/502 (35%), Positives = 267/502 (53%), Gaps = 32/502 (6%) Query: 1 MRLDR--LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAG 58 M+L+ L+ + +L A S+A +++ HL+ AL + + + ++ Sbjct: 1 MKLEMSVLSKNLEASLHKALSIAFDFHHEYATLEHLLLALT--DDIDARRVFYAFRVSID 58 Query: 59 QLRTDINQALN-RLPQVEGTG-GDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL 116 +L+ I L +P + G +V+P+ R+++ A G + ++ + L Sbjct: 59 KLKITIINFLRYEIPTLIDKGISEVKPTAIFERLIHRAIIHAHTSGKSEVTGANILAEIL 118 Query: 117 ESRGTLA---------------------DILKAAGATTANITQAIEQMRGGESVNDQGAE 155 + + + ++ + E + +VN + Sbjct: 119 SEKDSYSACFLHEQNIKYIDVVNYTSNNNLYAGEFNVDQEFVKYNEYGKSIGNVNKDILK 178 Query: 156 DQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAI 215 D + L Y ++L E A++GK+D VIGR E+ RT++VL RR KNNP+ +G+PGVGKTAI Sbjct: 179 DN-ETLDSYCVNLNEAAKKGKIDYVIGRAYELERTMEVLLRRRKNNPLYVGDPGVGKTAI 237 Query: 216 VEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVIL 275 VEGLA +II G+VP+ LK + +LDMGAL+AG +YRG+FEER+K V+ + +E N IL Sbjct: 238 VEGLALKIIEGDVPDQLKKMVIYSLDMGALLAGTRYRGDFEERIKSVIKAIEAKE-NAIL 296 Query: 276 FIDELHTMVGAGK-ADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334 FIDE+HT+VGAG + G++DA N+LKPALARG L C+GATT EY EKD AL RR+Q Sbjct: 297 FIDEIHTIVGAGSTSGGSLDASNLLKPALARGTLRCIGATTYKEYNNNFEKDRALARRYQ 356 Query: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394 K+ V E SV +T+ IL G+K YE HH V+ T+ AI AA LS RYI+ + LPDKA+D+I Sbjct: 357 KINVEESSVGETLRILDGIKSYYESHHQVRYTNQAIKYAAELSDRYISGKMLPDKAVDVI 416 Query: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQA--LMKESDEASKKRLDMLNEELSDKE 452 DEA ++ II E L+ + K + L +++ ++ Sbjct: 417 DEAGVYCKLHNTGNKVITGSDIEHIISRITEIPCSNLLFNDLDRVKNLEENLKKDIFGQD 476 Query: 453 RQYSELEEEWKAEKASLSGTQT 474 S L + K KA L Sbjct: 477 FAISHLVDSIKIAKAGLRNYNK 498 Score = 329 bits (844), Expect = 2e-88, Method: Composition-based stats. Identities = 129/427 (30%), Positives = 241/427 (56%), Gaps = 24/427 (5%) Query: 446 EELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGK 505 +E ++ + L ++ S L+ K E +V R + Sbjct: 339 KEYNNNFEKDRALARRYQKINVEESSVGETLRILDGIKSYYESHHQV----RYTNQAIKY 394 Query: 506 IPELEKQLEAATQLEGKTMRLL-------------RNKVTDAEIAEVLARWTGIPVSRMM 552 EL + + L K + ++ +T ++I +++R T IP S ++ Sbjct: 395 AAELSDRYISGKMLPDKAVDVIDEAGVYCKLHNTGNKVITGSDIEHIISRITEIPCSNLL 454 Query: 553 ESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKT 612 ++ +++ +E+ L + GQ+ A+ + ++I+ ++AGL + N+P+ S+LF GPTGVGKT Sbjct: 455 FNDLDRVKNLEENLKKDIFGQDFAISHLVDSIKIAKAGLRNYNKPLASYLFSGPTGVGKT 514 Query: 613 ELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYS 672 EL + LAN M ++R DMSE+ME H++S+++G+PPGYVGY++GG LT+++ R YS Sbjct: 515 ELARQLANHM---GMKLIRFDMSEYMESHAISKIIGSPPGYVGYDQGGLLTDSISRHQYS 571 Query: 673 VILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGEL 732 V+LLDE+EKAH D++NILLQ++D G +TD G+ V+F N V+I+T+N G+ + + Sbjct: 572 VLLLDEIEKAHSDIYNILLQIMDYGCVTDTYGKKVNFHNVVIILTTNAGAFELSKSSIGF 631 Query: 733 --DYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERG 790 + + + F PEF NR+D ++ F L ++ + I + + +L ++L ++ Sbjct: 632 IRNKSFTHGDNEKAIERIFSPEFRNRLDAIISFSSLDQEVMLRIVKKFIYQLKEQLAKKN 691 Query: 791 YEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRL--EV 848 I ++D+ L L+++GY+ YG R ++ I ++++ LA++IL G+L G +++ + Sbjct: 692 VHIDVADDVLMYLAQSGYNDAYGVRNIENIISKKVKKYLAEEILFGKLFNGGNVKIKLDA 751 Query: 849 NEDRIVA 855 + +++V Sbjct: 752 DTNKLVY 758 >UniRef50_B0MVC3 Putative uncharacterized protein n=3 Tax=Bacteroidales RepID=B0MVC3_9BACT Length = 819 Score = 362 bits (929), Expect = 3e-98, Method: Composition-based stats. Identities = 159/340 (46%), Positives = 225/340 (66%), Gaps = 10/340 (2%) Query: 528 RNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRS 587 ++ I +V+ TGIP R+ SE E+L + L RVIGQ EAV+ +S +I+RS Sbjct: 478 PPEIRAEHIEQVITSMTGIPAERLSGSESERLRGLADYLSARVIGQCEAVEKISRSIQRS 537 Query: 588 RAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLV 647 RAGL D RPIG F+F+GPTGVGKT L K L+ ++FD ++ ++RIDMSE+ EKH+V+RL+ Sbjct: 538 RAGLKDEGRPIGVFMFVGPTGVGKTLLAKELSKWLFDENKGLIRIDMSEYSEKHNVARLI 597 Query: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTV 707 G+PPGYVGY EGG LTEAVRR PYSV+L DE+EKAHP+VFN LLQ+ D+G LTDG GR V Sbjct: 598 GSPPGYVGYGEGGQLTEAVRRHPYSVVLFDEIEKAHPEVFNTLLQIFDEGHLTDGSGRKV 657 Query: 708 DFRNTVVIMTSNLGSDLIQERFGELDYAHMKE----------LVLGVVSHNFRPEFINRI 757 DFRNTV+I+TSN+GS R ++ Y+ + + F PEF+NRI Sbjct: 658 DFRNTVIILTSNVGSRAAAIRSTQVGYSTCSKSDTQQKAPQSEYRRALEETFAPEFLNRI 717 Query: 758 DEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPL 817 D++V+F L + I ++LK L R + GY++ I+DEA + L+ GY YG R L Sbjct: 718 DDIVIFRTLDLSDVERIIDLELKGLLSRTDRLGYKVEITDEAKRTLAAIGYQRKYGVRAL 777 Query: 818 KRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857 +R + ++IE PL+ I+ G+L G+ + +E + ++ V ++ Sbjct: 778 RRTLLERIEEPLSGLIIDGKLHSGERVIVEPDGEKEVILR 817 Score = 336 bits (861), Expect = 3e-90, Method: Composition-based stats. Identities = 154/411 (37%), Positives = 228/411 (55%), Gaps = 40/411 (9%) Query: 34 LMSALLNQEGGSVSPLLTSAGIN--AGQLRTDINQALNRLPQVEGTGGDVQ-----PSQD 86 L +L +EG +LTS + Q+ I + + + + + + +++ Sbjct: 33 LTLEILREEGSLAHQILTSRLKDWEIHQICLRIESEIRSVSAPDSSRQNPEEFFPLYTRE 92 Query: 87 LVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTL-ADILKAAGATTANITQAIEQMRG 145 L R+ +S+ +L + T+ + +L I +++M Sbjct: 93 LQRLFAPMHH---------VSTAHALLHIVSDPHTITSQVLAMYHFDAQAIATELQKMTL 143 Query: 146 GESVNDQ----------------------GAEDQRQALKKYTIDLTERAEQGKLDPVIGR 183 + L K+ DLT A +G++DPV+GR Sbjct: 144 EADQTTPPDTNFRPTPELRFIGLREPVRDTPPAEPALLDKFGTDLTYEARRGRIDPVVGR 203 Query: 184 DEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMG 243 + E+ R +Q+L RR KNNP+LIGE GVGK+AIVEGLA R+ EVP ++G+R+ +LD+ Sbjct: 204 EREMERIVQILSRRKKNNPILIGEAGVGKSAIVEGLALRMAADEVPATIRGKRLYSLDVS 263 Query: 244 ALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPAL 303 +L+AG KYRGEFEER++ +L +L +++ + ILFIDE+HT+ GAG G++D N+LKPAL Sbjct: 264 SLLAGTKYRGEFEERMQRLLEELRRKQ-DSILFIDEIHTIAGAGSTQGSLDTANILKPAL 322 Query: 304 ARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHV 363 ARGEL +GATTLDEYR+ IE D ALERRFQK+ V S E+T+ IL + YE HH V Sbjct: 323 ARGELQVIGATTLDEYREDIESDPALERRFQKILVEPASEEETLQILHNIAPHYERHHGV 382 Query: 364 QITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDR 414 + +D A+ A L+ RYI DR PDKAID++DEA + I +Q K E+ R Sbjct: 383 RYSDEALRACVALTGRYITDRNFPDKAIDVLDEAGARIHLQDKGKTEKPSR 433 >UniRef50_A6KY28 ATP-dependent Clp protease, ATP-binding subunit ClpA n=11 Tax=Bacteroides RepID=A6KY28_BACV8 Length = 742 Score = 357 bits (916), Expect = 1e-96, Method: Composition-based stats. Identities = 167/487 (34%), Positives = 257/487 (52%), Gaps = 21/487 (4%) Query: 7 TNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQ 66 T+ A A AQS A+ + ++FI P HL+SALL Q L +L I++ Sbjct: 6 TDSVNYAFASAQSQAMQYRHEFITPEHLLSALLEQ--VPFQKALAECFCTPEELSQSISE 63 Query: 67 ALNRL--PQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLAD 124 L++ + +++ S L +L + V L+ + A Sbjct: 64 YLSKKVERVPQEIEYELEISGQLSELLQYAYMTISHSSAEEMDVPHLVQGMLQLEDSWAG 123 Query: 125 IL--KAAGATTANITQAIE---QMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDP 179 L + G ++ + +++ + + Y L E + +P Sbjct: 124 YLLKETVGEDMPEFLSSLISNYEHMNQFQEETSSEQEKSEPWRNYVTCLNEGLQDR--NP 181 Query: 180 VIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLA 239 +IGR+ E+ RTIQVL R+ KNNP+ +GEPGVGKTA+V GLA RI G VPE L G R+ Sbjct: 182 LIGRNVELERTIQVLCRKEKNNPLHVGEPGVGKTALVYGLAARIEAGNVPERLTGCRIYE 241 Query: 240 LDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKA-DGAMDAGNM 298 LD+G L+AG +YRGEFE+RLK ++ + K EG+ I++IDE+H ++GAG+ DG+MDA NM Sbjct: 242 LDLGNLLAGTQYRGEFEKRLKAIMEGIRK-EGHAIVYIDEIHNLIGAGRTGDGSMDASNM 300 Query: 299 LKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYE 358 LKP L GE+ +G+TT +E+ +Y + L RRFQ++ + EP +E+TI I+ GLKERYE Sbjct: 301 LKPYLEGGEIRFIGSTTYEEFNRYFSRSRGLVRRFQQIDIQEPGIEETIHIVEGLKERYE 360 Query: 359 LHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418 H V + I A T + RYI+DR LPDKAIDL+DEA + +I E +D+ Sbjct: 361 TFHGVVYEEGVIAYAVTAAARYISDRFLPDKAIDLVDEAGAY--REIHPTDTETQTVDKA 418 Query: 419 IIQ------LKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGT 472 +I K++ A+ +E + + + ++ ++ +E ++ E + KA L Sbjct: 419 LITDILARICKVDVLAMKEEDNATLETLHERISAKIYGQEEAVCQVVEAVQMAKAGLLDE 478 Query: 473 QTIKAEL 479 A L Sbjct: 479 NKPLASL 485 Score = 323 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 139/341 (40%), Positives = 198/341 (58%), Gaps = 4/341 (1%) Query: 514 EAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQ 573 EA E V A I ++LAR + V M E + L + + + ++ GQ Sbjct: 398 EAGAYREIHPTDTETQTVDKALITDILARICKVDVLAMKEEDNATLETLHERISAKIYGQ 457 Query: 574 NEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRID 633 EAV V A++ ++AGL D N+P+ S LF+GPTGVGKTE+ K LA+ + A+ R D Sbjct: 458 EEAVCQVVEAVQMAKAGLLDENKPLASLLFVGPTGVGKTEVAKVLASEL---GIALQRFD 514 Query: 634 MSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQV 693 MSE+ EKH+V++L+G+P GY+GYE+GG LT+A+R+ P V+LLDE+EKAHPD+FNILLQV Sbjct: 515 MSEYTEKHTVAKLIGSPAGYIGYEDGGLLTDAIRKTPNCVLLLDEIEKAHPDIFNILLQV 574 Query: 694 LDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLI-QERFGELDYAHMKELVLGVVSHNFRPE 752 +D LTD +GR D R+ ++IMTSN G+ Q G E +L V F+PE Sbjct: 575 MDYAVLTDNKGRKADCRHVILIMTSNAGAQFAHQASIGFSGQITAGEAMLKQVKKTFKPE 634 Query: 753 FINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVY 812 FINR+ VVFH + + I +L L +L R + +S EA K L + G+ Y Sbjct: 635 FINRLSATVVFHDMDYGMASLILNKKLNELKNKLSARHVGMELSPEAYKHLLKLGFTKEY 694 Query: 813 GARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRI 853 GAR + R I Q++ L ++IL G L G +R+ + Sbjct: 695 GAREMDRVITSQLKPLLMREILFGTLKTGGKVRVTAGNGEL 735 >UniRef50_B1GUR2 ATP-dependent Clp protease-like protein n=1 Tax=Geobacillus stearothermophilus RepID=B1GUR2_BACST Length = 424 Score = 355 bits (910), Expect = 6e-96, Method: Composition-based stats. Identities = 140/400 (35%), Positives = 222/400 (55%), Gaps = 12/400 (3%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M++ ++ Q +L+ A+ A I+ HL+ L+ + + +L +AGI+ + Sbjct: 1 MKM--FSSDLQNSLSLAKQQAWKFGVSEIKSEHLLWGLIADTKFNSAQILINAGIDLDVV 58 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG 120 + +I L + S++ ++ LA+ N I ++ + + + + Sbjct: 59 KKEIESKLTSIKPG------RMYSENGEKIYKSMLSLAEH-HQNIIDTQHLLYSLISTDC 111 Query: 121 TLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPV 180 T +I+K G I + GES+ L KY IDLT+ + +GKL Sbjct: 112 TGTNIIKKIGGDPLRIKSLCLEYINGESLTSTYY--NTPNLDKYCIDLTDLSTKGKLSFP 169 Query: 181 IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL 240 +GR++EI VL ++ K N V+ G PGVGKT++VEGLA RI + EV + L ++ +L Sbjct: 170 VGREKEIDILQTVLLKKKKRNIVITGLPGVGKTSLVEGLAIRITSKEVSKKLYNLKIKSL 229 Query: 241 DMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLK 300 + +LVAG K+RGEFEERL G++ +L+ N++LFIDE+HT++GAG G +DA N+LK Sbjct: 230 SLASLVAGTKFRGEFEERLVGIVEELSMYP-NIVLFIDEIHTLIGAGAVPGGLDASNILK 288 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELH 360 P LA G C+GATT +EY +Y +KDAAL+RRFQ++ + EPS +T+ IL L Y + Sbjct: 289 PVLATGNFICIGATTEEEYEKYFKKDAALDRRFQRIPLQEPSKTETLKILSVLSHEYGKY 348 Query: 361 HHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400 H+V + + L+ +Y DR PDKAIDL+D + Sbjct: 349 HNVFYSQEVLEEIVELADKYFPDRYFPDKAIDLLDYVGAK 388 >UniRef50_B7GCV2 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7GCV2_PHATR Length = 683 Score = 353 bits (907), Expect = 1e-95, Method: Composition-based stats. Identities = 164/419 (39%), Positives = 252/419 (60%), Gaps = 20/419 (4%) Query: 449 SDKERQYSELEEEWKAEKASLSGTQTIKAELEQA------KIAIEQARRVGDLARMSELQ 502 + ER+ + + + ++ Q +++ E+ A+ A + D Sbjct: 261 AALERRLQPVMVKEPSVVQTIDILQAVQSNYEKHHGVTYTSAALNAAATLSDRYMTDRFL 320 Query: 503 YGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRM 562 K +L + A LE + +VT+ +A V++ W+GIP+ ++ E ++L + Sbjct: 321 PDKALDLLDEAGAIAHLEEPD-EDVTPEVTEHTVAMVISEWSGIPMGKLETQEMDRLQAL 379 Query: 563 EQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFM 622 E E+ RV GQ A+ V+ A+RR+R+GL DP RP+ SFLF GPTG GKTELCK LA Sbjct: 380 EGEMGRRVKGQGRAIRGVARAVRRARSGLRDPRRPVASFLFCGPTGTGKTELCKTLAETY 439 Query: 623 FDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKA 682 + S++ M+RIDMSE+MEKHSVSRL G PPGY+GYEEGG LTEAVRR P+SV+LLDE+EKA Sbjct: 440 YGSEKDMIRIDMSEYMEKHSVSRLTGPPPGYIGYEEGGQLTEAVRRAPHSVVLLDELEKA 499 Query: 683 HPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE----------RFGEL 732 H DV NILLQV++DG LTDG+GRT++F+N++++MTSN+GS I E + Sbjct: 500 HGDVLNILLQVMEDGMLTDGKGRTINFKNSILVMTSNVGSRRILEVARSGRDSIVQKDHY 559 Query: 733 DYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRL-EERGY 791 YA + ++V + +PE +NRIDE++VF PL + IA++ + ++ +R +E+ Sbjct: 560 LYAELAQVVKEELEREMKPELLNRIDEIIVFSPLSTGDLWMIAELIVAKISERALKEQKL 619 Query: 792 EIHISDEALKLLSENGY--DPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEV 848 E+ I ++ + G +GARP++RA Q+ +E+ L+ I+ G L G+ + + Sbjct: 620 ELKIDRSVIERVMAEGSANADQFGARPMRRAAQRFVEDSLSDAIIQGFLQEGEGATVSL 678 Score = 335 bits (859), Expect = 4e-90, Method: Composition-based stats. Identities = 185/506 (36%), Positives = 267/506 (52%), Gaps = 31/506 (6%) Query: 82 QPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALE-SRGTLADILKAA----GATTANI 136 +DL R L KLA + G + S+ LA LE S G A ++K T ++ Sbjct: 1 PFGKDLKRTLVQAGKLADQMGSTTVGSQHVFLALLEYSEGGWAVLVKMNVLDDTVTALDV 60 Query: 137 TQAIEQMRGGES-------VNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRR 189 +++ Q + V G + L + +DLT++AE G LDPV GRD+E R Sbjct: 61 CESLLQNMADQPDQARRELVTGAGGSGKMPTLTECGVDLTQQAEDGLLDPVYGRDDETRA 120 Query: 190 TIQVLQRRTKNNPVLIGEP-GVGKTAIVEGLAQRIINGEV-PEGLKGRRVLALDMGALVA 247 ++ L RR KNN LIGEP GVGKTAI EG+AQ +++ ++ P LKG R+ +L++ LVA Sbjct: 121 CVRTLIRRRKNNVCLIGEPVGVGKTAIAEGVAQILVDEKLCPARLKGHRLFSLELSNLVA 180 Query: 248 GAKYRGEFEERLKGVLNDLAKQEGN-VILFIDELHTMVGAGKADGAMDAGNMLKPALARG 306 G KYRGEFEERL+ ++ ++ + ILFIDE+H +VGAG A+G MDA N+LKPALARG Sbjct: 181 GTKYRGEFEERLQSIIKEVTDPKAPPTILFIDEIHNLVGAGAAEGGMDAANLLKPALARG 240 Query: 307 ELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQIT 366 EL +GATT+ EYR+YIEKDAALERR Q V V EPSV TI IL+ ++ YE HH V T Sbjct: 241 ELQLIGATTIMEYRKYIEKDAALERRLQPVMVKEPSVVQTIDILQAVQSNYEKHHGVTYT 300 Query: 367 DPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQ 426 A+ AAATLS RY+ DR LPDKA+DL+DEA + ++ + + + + + E Sbjct: 301 SAALNAAATLSDRYMTDRFLPDKALDLLDEAGAIAHLEEPDEDVTPEVTEHTVAMVISEW 360 Query: 427 QALMKESDEASKK-RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIA 485 + E + RL L E+ ++ + +A + + ++ L + Sbjct: 361 SGIPMGKLETQEMDRLQALEGEMG------RRVKGQGRAIRGVARAVRRARSGLRDPRRP 414 Query: 486 IEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTG 545 + G EL K L K ++R +++ ++R TG Sbjct: 415 VASFLFCGPTGTGK-------TELCKTLAETYYGSEKD--MIRIDMSEYMEKHSVSRLTG 465 Query: 546 IPVSRMMESEREKLLRMEQELHHRVI 571 P + E +L + H V+ Sbjct: 466 PPPGYIGYEEGGQLTEAVRRAPHSVV 491 >UniRef50_C9PUC6 ATP-dependent Clp protease subunit n=1 Tax=Prevotella sp. oral taxon 472 str. F0295 RepID=C9PUC6_9BACT Length = 753 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 162/487 (33%), Positives = 260/487 (53%), Gaps = 16/487 (3%) Query: 7 TNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQ 66 ++ L A + + + N+F+ P HL+ AL NQ+ S+ L ++G + L ++ Sbjct: 7 SHDTDQVLNGALNYCMLYRNEFVTPEHLLMALTNQDNFSI--ALDASGGDTLALMAQLDG 64 Query: 67 ALNRLPQVEGTGGDVQP-SQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADI 125 + ++ + V S L VL+ KLA + V+ + + A Sbjct: 65 VVGKMETMPADWHHVPDNSVLLSEVLSNAQKLAMMADVETLQVPHLVMGLINLENSDAAY 124 Query: 126 L--KAAGATTANITQAIEQMRGGESVND---QGAEDQRQALKKYTIDLTERAEQGKLDPV 180 L K G N + ++ ++ ++ + ++ +P+ Sbjct: 125 LLNKQLGENATNFVAELVELYTNDARMSFFGGEEGEEEENEPWRSLVTCVNDTYKNHNPL 184 Query: 181 IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL 240 IGR+EE++RTIQVL R+ KNNP+ +GEPGVGKT++V GLA I G+VP+ L+G RV + Sbjct: 185 IGREEELQRTIQVLCRKEKNNPLHVGEPGVGKTSLVYGLAAMIERGDVPQRLQGCRVYQM 244 Query: 241 DMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKA-DGAMDAGNML 299 DMG ++AG +YRG+ E+R+K V++ L + EGN IL+IDE+H +VGAG++ +G+MDA NML Sbjct: 245 DMGTMLAGTQYRGDLEKRIKQVMDGLLE-EGNTILYIDEIHNLVGAGRSGEGSMDASNML 303 Query: 300 KPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYEL 359 KP L G++ +G+TT EY +Y K A + RRFQ++ V EP+ E+ I IL GLK +YE Sbjct: 304 KPYLEGGDVRFIGSTTYAEYNRYFAKSAGIVRRFQQIDVPEPTPEEAIKILNGLKGQYEK 363 Query: 360 HHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRI 419 H+V+ + I A S +Y+ DR LPDKAIDLIDEA + +M P + ++D+ + Sbjct: 364 FHNVRYSPGVIEFAVRASAKYVNDRHLPDKAIDLIDEAGAYRQM--HPLPTKRQKVDKAL 421 Query: 420 IQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAEL 479 + L + ++ +L E KE+ Y + +A + QT KA L Sbjct: 422 VSDVLTKVCKVQAVALKDDGNEALLTLEKRMKEQIYGQN----QAVELVTQAIQTAKAGL 477 Query: 480 EQAKIAI 486 + + Sbjct: 478 TEEGKPL 484 Score = 314 bits (805), Expect = 8e-84, Method: Composition-based stats. Identities = 131/334 (39%), Positives = 203/334 (60%), Gaps = 4/334 (1%) Query: 514 EAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQ 573 EA + + R KV A +++VL + + + + E LL +E+ + ++ GQ Sbjct: 400 EAGAYRQMHPLPTKRQKVDKALVSDVLTKVCKVQAVALKDDGNEALLTLEKRMKEQIYGQ 459 Query: 574 NEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRID 633 N+AV+ V+ AI+ ++AGL + +P+ + LF+GPTGVGKTE+ + LA+ + +VR D Sbjct: 460 NQAVELVTQAIQTAKAGLTEEGKPLSAMLFVGPTGVGKTEVARVLAHEL---GIELVRFD 516 Query: 634 MSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQV 693 MSE+ EKH+V++L+G+P GYVGYE+GG LT+A+R+ P V+LLDE+EKAH D++NILLQV Sbjct: 517 MSEYTEKHAVAKLIGSPAGYVGYEDGGLLTDAIRKIPNCVLLLDEIEKAHADIYNILLQV 576 Query: 694 LDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE-RFGELDYAHMKELVLGVVSHNFRPE 752 +D RLTD +G+ DFRN V+IMTSN G+ + G E ++ V F+PE Sbjct: 577 MDYARLTDNKGQKADFRNVVLIMTSNAGAQFASQANVGFASNVSRGEAMMVQVKKTFKPE 636 Query: 753 FINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVY 812 FINR+ VVF + E I + ++ L ++L R E+ + A L G+ P+Y Sbjct: 637 FINRLSATVVFRDMDEAMAHLILKKKINALQQQLVARNVELTLDAAAENYLLRLGFTPLY 696 Query: 813 GARPLKRAIQQQIENPLAQQILSGELVPGKVIRL 846 GAR + R I Q++ L +++L G+L G + Sbjct: 697 GAREMDRVIAAQLKPLLTREMLFGKLKKGGKAIV 730 >UniRef50_C5LIJ2 ATP-dependent Clp protease, putative n=3 Tax=Perkinsus marinus ATCC 50983 RepID=C5LIJ2_9ALVE Length = 895 Score = 352 bits (903), Expect = 3e-95, Method: Composition-based stats. Identities = 171/487 (35%), Positives = 247/487 (50%), Gaps = 19/487 (3%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 D L++ A+ AQ ++ + L+ L ++ G S LL AG+ +L+ Sbjct: 147 FDALSDSSARAIHRAQEESMNL--ATVPLEGLLIGLASERSGGASKLLREAGVQVAELKH 204 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLA-----ALE 117 G V ++V V+ C AQ I++E + Sbjct: 205 LAPLQAAPDLVSWGAVERVPLDDEVVEVIRGCVDKAQ----GPITTEALLEGVIGKMLAR 260 Query: 118 SRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQR-QALKKYTIDLTERAEQGK 176 G +++ + + + E+ V L+ +LT A +GK Sbjct: 261 PAGMEPELMGRLQSVLQRLQEWGEEDAEKIPVGGFVPGTSGGSVLESCGRNLTALAREGK 320 Query: 177 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRR 236 L +GRD EI R IQVL R TKNNPVL+GEPGVGKTA+ EG+A+ I GEVP L G Sbjct: 321 LLKCVGRDAEIGRMIQVLSRMTKNNPVLLGEPGVGKTAVAEGMAELIARGEVPTHLAGVA 380 Query: 237 VLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKA-DGAMDA 295 + + +G+L+AG KYRGEFEERLK ++ + +G +IL IDELHT+VGAG DGA+DA Sbjct: 381 IWDVSIGSLLAGTKYRGEFEERLKRLVKEATDADGKIILLIDELHTIVGAGATGDGAIDA 440 Query: 296 GNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKE 355 N+LKPAL+RGEL +GATT EY +YI KD ALERRFQ V V EP+ + +L G+ Sbjct: 441 ANILKPALSRGELRVIGATTQSEYDKYIAKDPALERRFQPVVVPEPTQAQAVDMLMGVAS 500 Query: 356 RYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRL 415 YE HH V+ TD AI A LS RYI R+LPD A D +DEAA+ R+Q ++P + Sbjct: 501 LYEEHHFVRFTDDAIEACVKLSSRYIPSRRLPDSAFDAMDEAAARKRIQQGARPSSRIEV 560 Query: 416 DRRIIQLKLEQ------QALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASL 469 + + + Q + L K+ + L+ + ++R S + + + + Sbjct: 561 NANDVAQTVAQWTGIPLEELTKDESARLLHMEERLDSRVIGQKRATSAVARAIRRARVGV 620 Query: 470 SGTQTIK 476 G + Sbjct: 621 RGIGNKR 627 Score = 332 bits (850), Expect = 4e-89, Method: Composition-based stats. Identities = 156/352 (44%), Positives = 222/352 (63%), Gaps = 24/352 (6%) Query: 511 KQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRV 570 + A +++ R +V ++A+ +A+WTGIP+ + + E +LL ME+ L RV Sbjct: 540 DEAAARKRIQQGARPSSRIEVNANDVAQTVAQWTGIPLEELTKDESARLLHMEERLDSRV 599 Query: 571 IGQNEAVDAVSNAIRRSRAGLAD--PNRPIGSFLFLGPTGVGKTELCKALANFMFDSD-E 627 IGQ A AV+ AIRR+R G+ RP FLF GPTGVGKTEL KAL++ F + Sbjct: 600 IGQKRATSAVARAIRRARVGVRGIGNKRPTACFLFCGPTGVGKTELSKALSDEYFGEEGR 659 Query: 628 AMVRIDMSEFMEKHSVSRLVGAPPGYVGYEE--GGYLTEAVRRRPYSVILLDEVEKAHPD 685 M+R+DMSEFME+HSVS+L+G+PPGYVGY+ GG LT+ VRR+P+S++L+DEVEKAHPD Sbjct: 660 NMIRLDMSEFMERHSVSKLIGSPPGYVGYDSNSGGVLTDRVRRQPHSLVLIDEVEKAHPD 719 Query: 686 VFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVV 745 V NILLQV+DDGRLTD GR DF N +++MTSN+GS + + Sbjct: 720 VLNILLQVMDDGRLTDSHGRLADFSNVILVMTSNVGSS------------------MEDL 761 Query: 746 SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERG-YEIHISDEALKLLS 804 +FRPEFINRIDEV+ F L E+ I I + + RL L+E+ ++ ++D L Sbjct: 762 KRHFRPEFINRIDEVIAFDSLTEEDIVRIVGLYVSRLQAALKEQHSIDLKVTDGLTAALG 821 Query: 805 ENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAV 856 + GY +GAR L R +Q +IE+P+A+ IL E+ G+ + + + +R + V Sbjct: 822 KEGYSAEFGARHLNRVMQARIEDPIAELILREEIHRGEELIADYDSERDMIV 873 >UniRef50_B8BRH2 Member of the clp superfamily, regulatory gamma subunit (Fragment) n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8BRH2_THAPS Length = 782 Score = 350 bits (897), Expect = 2e-94, Method: Composition-based stats. Identities = 159/384 (41%), Positives = 237/384 (61%), Gaps = 12/384 (3%) Query: 481 QAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVL 540 A+ A R + + + + E ++ A E + VTD +A V+ Sbjct: 390 AIDAAVRLAERYINDRFLPDKAIDLLDEAGSMVKLADDGEEDDLPDDFFVVTDDNVATVV 449 Query: 541 ARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGS 600 + +GIPV ++ E+ KL+R+E ++ RV GQ+ AV++V+ AIRR+R+GL D +P+ + Sbjct: 450 SEISGIPVGKLDRDEKAKLMRLEADIAKRVKGQDPAVNSVARAIRRARSGLRDQTKPVAT 509 Query: 601 FLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG 660 FLF GPTGVGKTELCKALA + ++ ++RIDMSE+ME+ SVSRLVGAPPGYVGY+EGG Sbjct: 510 FLFCGPTGVGKTELCKALAQTYYGREKDIIRIDMSEYMERFSVSRLVGAPPGYVGYDEGG 569 Query: 661 YLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL 720 LTEA+RR+P+SV+L DE+EKAH DV N+LLQ+LD+G LTDG+GRTV F+N + +MTSN+ Sbjct: 570 QLTEAIRRKPHSVVLFDELEKAHEDVLNVLLQILDEGSLTDGKGRTVSFKNCIFVMTSNI 629 Query: 721 GSDLIQE-RFGELDYAH--------MKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHI 771 GS I + GE A M+ V + +PEF+NRIDE+VVF PL + + Sbjct: 630 GSQEILKLSRGENPTAEAGSSAGMTMEGAVKNELEKKMKPEFLNRIDEIVVFKPLEDDVL 689 Query: 772 ASIAQIQLKRLYKRLE-ERGYEIHISDEALKLLSENG--YDPVYGARPLKRAIQQQIENP 828 SIA L KR E+ + + + ++ G +GARP++RA ++ +E+ Sbjct: 690 ISIAMNILDETMKRAASEQDMAVTCTQSLMATVANEGAFSAAQFGARPMRRAAKRFLEDT 749 Query: 829 LAQQILSGELVPGKVIRLEVNEDR 852 L++ I+ L G + +++ + Sbjct: 750 LSEAIMREFLSEGDEVIVDMANES 773 Score = 346 bits (887), Expect = 3e-93, Method: Composition-based stats. Identities = 161/428 (37%), Positives = 230/428 (53%), Gaps = 21/428 (4%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGS---VSPLLTSAGINAGQ 59 +D+L++ A++ +Q + +E L+ ++ G +LTS GI+ Sbjct: 7 MDKLSDGCIKAISFSQDASHNLGVSTLENEMLLVGMVRSAGADDIEARKILTSFGISPDG 66 Query: 60 LRTDINQALNRLPQVEGTGGD-------VQPSQDLVRVLNLCDKLAQKRGDNFISSELFV 112 L + + + S + + L+ +A + G + + Sbjct: 67 SLKAAETVLIKRGVADINNSKSGEGLPPLPFSDSVKKTLSEAVSIADRMGSGAVLPGHVL 126 Query: 113 LAALESRGTLADILKAAGAT--TANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTE 170 LA LE + + A A + + E V L K IDLTE Sbjct: 127 LAVLEYDDRYSVATEDAEKCAGLAVLQKTAESSPVTLIVVGGNEGMSTPTLDKVGIDLTE 186 Query: 171 RAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIING---- 226 A +G+LD V GR+ EIR ++ L RR K+NP LIGE GVGKTAI EG+AQ + Sbjct: 187 MAREGRLDAVYGRENEIRMCLRTLGRRRKSNPCLIGEAGVGKTAIAEGVAQCLAESLPPL 246 Query: 227 -EVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVG 285 P L+G RV+++DM +LVAG K+RG+FEER++ ++ + ILFIDELHT++G Sbjct: 247 PPCPRALQGFRVVSVDMASLVAGMKFRGDFEERIQNLIKE--ASSTPTILFIDELHTLIG 304 Query: 286 AGKADGA--MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSV 343 AG G M A N++KPALARGE+ +GATT+ EYRQYIEKD ALERRFQ + V EP+V Sbjct: 305 AGGGGGDGGMSAANLMKPALARGEIRVIGATTISEYRQYIEKDGALERRFQPILVNEPTV 364 Query: 344 EDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRM 403 ++ I IL + RYE H V+ T AI AA L+ RYI DR LPDKAIDL+DEA S +++ Sbjct: 365 DEAIEILTAVTPRYEEFHGVRYTPFAIDAAVRLAERYINDRFLPDKAIDLLDEAGSMVKL 424 Query: 404 QIDSKPEE 411 D + ++ Sbjct: 425 ADDGEEDD 432 >UniRef50_C3XFH5 ATP-dependent Clp protease ClpB n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XFH5_9HELI Length = 763 Score = 343 bits (879), Expect = 2e-92, Method: Composition-based stats. Identities = 165/538 (30%), Positives = 262/538 (48%), Gaps = 26/538 (4%) Query: 23 GHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQALNRL---PQVEGTGG 79 + + H +L G L+ + G N L + L + + Sbjct: 21 DMRHDVLTIEHAFYVMLENPLG--RELVEATGANTKILMDSLGAYLEKHIPKGRALKELE 78 Query: 80 DVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTL-ADILKAAGATTANITQ 138 + +RV + A+ + F +A ++ A +LKA G ++ + Sbjct: 79 APHQTPAFMRVFDHMISHAKNAQKASVGIGDFFVALMQEEDCYCARLLKAQGIQIEDVMR 138 Query: 139 AIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRT 198 + + E V+ + +D + L+KY +L + A +GK+DP+IGRD EI + QVL RR Sbjct: 139 IV--VDFDEHVSREKTKDSQSQLEKYAKNLNQLAIEGKIDPLIGRDLEINQIAQVLCRRK 196 Query: 199 KNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEER 258 KNNP+LIGE GVGK+AIVEGLA RI+ VP L + A+D+ ++VAG KYRGEFE R Sbjct: 197 KNNPMLIGEAGVGKSAIVEGLALRIVERSVPAKLLNNVIYAVDVSSVVAGTKYRGEFETR 256 Query: 259 LKGVLNDLAKQEGNVILFIDELHTMVGAGKAD-GAMDAGNMLKPALARGELHCVGATTLD 317 +K +L ++ K + N+I+F DE+H +VGAG+++ G MD N+LKP LA G L C+GATT Sbjct: 257 IKKILAEVEK-DKNIIIFFDEIHMIVGAGQSNSGGMDFSNLLKPMLASGRLRCIGATTSH 315 Query: 318 EYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLS 377 +Y+ +KD AL RRF ++ V EPS E+ + IL + YE H+V + AI A +LS Sbjct: 316 DYKNSFDKDKALARRFTQIKVEEPSEEECLLILEKIAPLYEKFHNVTYENEAIKACVSLS 375 Query: 378 HRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEAS 437 +YI +R LPDKAIDL+DEA + ++ E D R + + K ++ Sbjct: 376 SKYITERHLPDKAIDLMDEAGAKAQLN------EFLCNDERKSETLEKLTKTKKTKKDSK 429 Query: 438 KKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLAR 497 + + E + + + + T + + + +R+ + Sbjct: 430 TQHKIITKEHIESLMASITNIPK----------STINADESMLLKNLESKLKKRIFSQDK 479 Query: 498 MSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESE 555 E KI + L + + + V E+++ LA+ GI R+ SE Sbjct: 480 AIEKIVEKIKINKAGLGELHRPIASFLFTGPSGVGKTELSKELAKILGIKFERIDMSE 537 Score = 318 bits (814), Expect = 8e-85, Method: Composition-based stats. Identities = 156/476 (32%), Positives = 250/476 (52%), Gaps = 16/476 (3%) Query: 381 IADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKR 440 ++ P A + ++ + ++ L RR Q+K+E E S++ Sbjct: 293 FSNLLKPMLASGRLRCIGATTSHDYKNSFDKDKALARRFTQIKVE---------EPSEEE 343 Query: 441 LDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSE 500 ++ E+++ ++ + E +A KA +S + E AI+ G A+++E Sbjct: 344 CLLILEKIAPLYEKFHNVTYENEAIKACVSLSSKYITERHLPDKAIDLMDEAGAKAQLNE 403 Query: 501 -LQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKL 559 L + + T+ K + +T I ++A T IP S + E L Sbjct: 404 FLCNDERKSETLEKLTKTKKTKKDSKTQHKIITKEHIESLMASITNIPKSTINADESMLL 463 Query: 560 LRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALA 619 +E +L R+ Q++A++ + I+ ++AGL + +RPI SFLF GP+GVGKTEL K LA Sbjct: 464 KNLESKLKKRIFSQDKAIEKIVEKIKINKAGLGELHRPIASFLFTGPSGVGKTELSKELA 523 Query: 620 NFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEV 679 + RIDMSE+ E HS+S+L+G+P GYVGYEEGG L +R P+ V+LLDE+ Sbjct: 524 KIL---GIKFERIDMSEYAESHSISKLIGSPAGYVGYEEGGLLINKIRINPHCVLLLDEI 580 Query: 680 EKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKE 739 EKAH DV+NILLQ++D LTD Q DF+N ++IMTSN GS G LD + + Sbjct: 581 EKAHSDVYNILLQIMDSATLTDNQNNKADFKNVILIMTSNAGSKE-GNSVGFLDTSEHRV 639 Query: 740 LVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEA 799 + + F PEF +R+D ++ F PLG + IAQ + L + L+E+ +++S +A Sbjct: 640 GM--AIKDTFSPEFRSRLDAIIPFMPLGVNELQKIAQKYITDLNETLKEKHITLNLSTKA 697 Query: 800 LKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855 + +++ D GAR +K+ I I+ PL+ +L GEL G V + V + +V Sbjct: 698 AQFIAQQSIDKALGAREIKKTIDSAIKLPLSNAMLFGELRKGGVAHINVKNNTLVF 753 >UniRef50_Q9ZN31 ATP-DEPENDENT PROTEASE,ATP-BINDING SUBUNIT n=17 Tax=Helicobacter RepID=Q9ZN31_HELPJ Length = 742 Score = 338 bits (868), Expect = 4e-91, Method: Composition-based stats. Identities = 163/457 (35%), Positives = 239/457 (52%), Gaps = 17/457 (3%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGS-VSPLLTSAGINAGQLR 61 +D+ L+ A LAL ++ H++ A+L G + L G ++ Sbjct: 1 MDKFNKDLNEVLSHALDLALDFNHVLCTTEHVLLAILEHGIGIRIFNTLEEDG--YHKME 58 Query: 62 TDINQALNRLPQVEGTGGDVQP-SQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG 120 + L + ++ + S L RV + + E ++ LE Sbjct: 59 QILKDYLQQYIPLKNDPTKIPDRSPVLARVFKKMY----ASYLDSVGVEELLIFILEYDD 114 Query: 121 TLA-DILKAAGATTANITQAIEQMRGGESVNDQGAEDQR----QALKKYTIDLTERAEQG 175 A +L + G T + A+ +ND ++ LKKYT +L+ A+ Sbjct: 115 CYASKLLDSFGITRSYFKSALLDFDNPNDINDNDINNEEAPKSTPLKKYTKNLSALAQNN 174 Query: 176 KLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGR 235 LDPVIGR+EEI R I++L RR KNNP+LIGE GVGKT+I E LA +I EVPE L+ Sbjct: 175 ALDPVIGREEEILRVIEILGRRKKNNPLLIGEAGVGKTSIAEALALKIAQKEVPEFLQEY 234 Query: 236 RVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKAD-GAMD 294 V +LD+ +VAGAKYRG+FE+RLK L ++ +Q G +ILFIDE+HT++GAG ++ G++D Sbjct: 235 EVYSLDLALMVAGAKYRGDFEKRLKKTLKEI-QQNGRIILFIDEIHTLLGAGSSNAGSLD 293 Query: 295 AGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLK 354 A N+LKP L G L C+GATT +EYR EKD A RRF V V EPS E IL+ + Sbjct: 294 AANILKPVLTDGSLKCLGATTFEEYRSVFEKDKAFNRRFSIVNVEEPSKEACYLILKNIA 353 Query: 355 ERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDR 414 YE HH V+ + A L+ Y+ D+ LPDKAI+L+DE S ++ + Sbjct: 354 PLYEEHHQVRYNESVFKACVDLTSYYMHDKFLPDKAIELLDEVGSRKKINPKKGKKISVD 413 Query: 415 LDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDK 451 + + LKL+ + SD+ + R L + L +K Sbjct: 414 DVQETLALKLKIPKMRLNSDKKALLRN--LEKSLKNK 448 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 118/349 (33%), Positives = 196/349 (56%), Gaps = 6/349 (1%) Query: 506 IPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQE 565 +P+ +L K K++ ++ E LA IP R+ ++ L +E+ Sbjct: 385 LPDKAIELLDEVGSRKKINPKKGKKISVDDVQETLALKLKIPKMRLNSDKKALLRNLEKS 444 Query: 566 LHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDS 625 L +++ Q EA++ VSNAI+ GL+ N+P+GSFLF+GP+GVGKTEL K LA + Sbjct: 445 LKNKIFAQTEAINLVSNAIKIQHCGLSAKNKPVGSFLFVGPSGVGKTELAKELALNL--- 501 Query: 626 DEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPD 685 + R DMSE+ E HSV++L+G+P GYVG+E+GG L A+++ P+ ++LLDE+EKAHP+ Sbjct: 502 NLHFERFDMSEYKEAHSVAKLIGSPSGYVGFEQGGLLVNAIKKHPHCLLLLDEIEKAHPN 561 Query: 686 VFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVV 745 V+++LLQV+D+ L+D G F++ ++IMTSN+GS ++ G + V Sbjct: 562 VYDLLLQVMDNATLSDNLGNKASFKHVILIMTSNVGSKD-KDTLGFFSTKNA--KYDRAV 618 Query: 746 SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSE 805 PE +RID +V F+ L + I ++L +L E+G + E +K +++ Sbjct: 619 KELLTPELRSRIDAIVPFNALSLEDFERIVSVELDKLKALALEQGVILKFHKEVVKCIAQ 678 Query: 806 NGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIV 854 Y GAR +K+ I +I+ L+ +L I + ++++V Sbjct: 679 KSYQTTLGAREIKKIIHNEIKTQLSDILLLQSFKKPCKIACLLEKNQLV 727 >UniRef50_D1AUG7 ATP-dependent clp protease ATP-binding subunit n=14 Tax=Rickettsiales RepID=D1AUG7_ANACI Length = 781 Score = 335 bits (860), Expect = 3e-90, Method: Composition-based stats. Identities = 167/500 (33%), Positives = 255/500 (51%), Gaps = 35/500 (7%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 L+ + +L A S+A ++ H L + V +L ++ +LR + Sbjct: 15 LSKNLEASLHRALSIAFDFRHECATLEH--LLLALTDDLDVRRVLYVCRVSIDRLRATLI 72 Query: 66 QAL--NRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLA--ALESRGT 121 L + + +V+PS +V++ A G + I+ + VLA LE Sbjct: 73 NFLRYEMSIAMNQSVTEVRPSMAFEKVVHRAIVHAHASGKDEIN-GVNVLAEIFLEKDSC 131 Query: 122 LADILKAAGATTANITQAIEQMRGGE-----------------------SVNDQGAEDQR 158 L ++ I E ++ Sbjct: 132 SVSFLNEHNVKYIDVVSCISSNEHPEELYDQHDLGKDVDFVKRGAVGFPHISKDVVSKDG 191 Query: 159 QALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEG 218 ++L+ Y ++L A+ GK+D VIGR E RTI+VL RR KNNP+ +G+ GVGKTAIVEG Sbjct: 192 ESLEAYCVNLNVLAKNGKIDYVIGRQYEQERTIEVLLRRRKNNPLYVGDSGVGKTAIVEG 251 Query: 219 LAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFID 278 LA RI+ G + LK + +LDMG+L+AG +YRG+FEER+K V+ + ++ N +LFID Sbjct: 252 LALRIVEGNIVPQLKCVEIYSLDMGSLLAGTRYRGDFEERIKAVIRAIENKK-NAVLFID 310 Query: 279 ELHTMVGAGKADGA-MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVF 337 E+HT++GAG G+ +DA N+LKPALARG + C+GATT EY EKD AL RR+QK+ Sbjct: 311 EIHTIIGAGSTSGSPLDASNLLKPALARGSIRCIGATTYKEYNSNFEKDRALARRYQKIN 370 Query: 338 VAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEA 397 V E +VE+TI IL G+K YE++H V T A+ AA LS RYIA+R LPDKA+D++DEA Sbjct: 371 VEESTVEETIQILSGIKSYYEIYHDVHYTSQAVKYAAELSDRYIAERMLPDKAVDVLDEA 430 Query: 398 ASSIRMQIDSKPEELDRLDRRIIQLKLEQ---QALMKESDEASKKRLDMLNEELSDKERQ 454 +++ + + D I ++ + L K + L + + ++ Sbjct: 431 GVYAKLRSGENGKVVTGRDIESIISRITEIPCDNLFASDTHKVKNLEENLKQVIFGQDAA 490 Query: 455 YSELEEEWKAEKASLSGTQT 474 S++ + + KA L Q Sbjct: 491 ISQIVDAIRIAKAGLRSHQK 510 Score = 321 bits (823), Expect = 7e-86, Method: Composition-based stats. Identities = 139/420 (33%), Positives = 218/420 (51%), Gaps = 16/420 (3%) Query: 432 ESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARR 491 E D A +R +N E S E + + I ++ A++ A Sbjct: 357 EKDRALARRYQKINVEESTVEETIQ--------ILSGIKSYYEIYHDVHYTSQAVKYAAE 408 Query: 492 VGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRM 551 + D + K ++ + +L + VT +I +++R T IP + Sbjct: 409 LSDRYIAERMLPDKAVDVLDEAGVYAKLRSGENGKV---VTGRDIESIISRITEIPCDNL 465 Query: 552 MESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGK 611 S+ K+ +E+ L + GQ+ A+ + +AIR ++AGL +P+ S+L GPTGVGK Sbjct: 466 FASDTHKVKNLEENLKQVIFGQDAAISQIVDAIRIAKAGLRSHQKPLASYLLAGPTGVGK 525 Query: 612 TELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPY 671 TEL K LA M +VR DMSE+ME H+V+R++G+PPGYVGYE+GG LT+ + R Y Sbjct: 526 TELVKQLAKNM---GMKLVRFDMSEYMESHTVARMIGSPPGYVGYEQGGLLTDTIARNQY 582 Query: 672 SVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGE 731 SV+LLDE+EKAH V+NILLQ++D G +TD GR V FRN V+++T+N G+ + Sbjct: 583 SVLLLDEIEKAHSSVYNILLQIMDYGCITDTYGRKVSFRNVVIVLTTNAGAVEFSQNAVG 642 Query: 732 LDYAHMKEL--VLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEER 789 D + + F PEF NR+D VV F L + + + L +L + Sbjct: 643 FDRDRTFHIGSERKAIEKIFGPEFCNRLDAVVSFSYLSADVMEKVVGKFIAELRDQLSRK 702 Query: 790 GYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVN 849 G +I I +++ L++ G YGAR + I Q+I+ LA ++L G+L G + + + Sbjct: 703 GVDISIDKASVEFLTKMGQQDGYGARKAQSVIAQKIKKHLALEMLFGKLAYGGRVEVRFD 762 >UniRef50_B0H033 Chaperone ClpB 1 (Fragment) n=3 Tax=Gammaproteobacteria RepID=B0H033_YERPE Length = 359 Score = 333 bits (855), Expect = 1e-89, Method: Composition-based stats. Identities = 161/381 (42%), Positives = 221/381 (58%), Gaps = 28/381 (7%) Query: 189 RTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAG 248 + I +L RR KNNP+L+GEPGVGKTA+VEGLA RI +G VP+ LK V LD+G L AG Sbjct: 1 QMIDILSRRRKNNPILVGEPGVGKTALVEGLALRIADGNVPDSLKTVSVRTLDLGLLQAG 60 Query: 249 AKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGEL 308 A +GEFE+RLK V+ + + V+LFIDE HT++GAG G DA N+LKPALARGEL Sbjct: 61 AGVKGEFEQRLKNVIEAVQQSPSPVLLFIDEAHTIIGAGNQAGGADAANLLKPALARGEL 120 Query: 309 HCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDP 368 + ATT EY+QY E+DAALERRFQ V V EP + +LRGLKERY HH V I D Sbjct: 121 RTIAATTWSEYKQYFERDAALERRFQMVKVDEPDDDTACLMLRGLKERYATHHGVHILDA 180 Query: 369 AIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQA 428 AI AA TLS R++ RQLPDKA+DL+D A + +RM ID+ P L ++ + L +EQQA Sbjct: 181 AITAAVTLSRRFLTGRQLPDKAVDLLDTAGARVRMSIDTLPTALMAINAELAALAMEQQA 240 Query: 429 LMKE---SDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIA 485 + ++ S RL + + + LE+++K EK + + ++ Sbjct: 241 IEQDLLLLPNVSSTRLPEIEQRRAALAVGQHTLEQQYKEEKRLTTLIIEARQDIANVAH- 299 Query: 486 IEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTG 545 + L+++L LL V +A V+A WTG Sbjct: 300 --------------------LVALQEELVQIQ----GNAPLLSLDVDVRTVAAVIADWTG 335 Query: 546 IPVSRMMESEREKLLRMEQEL 566 +P+S +++ E+ LL++E L Sbjct: 336 VPLSSLLKDEQTDLLQLENHL 356 >UniRef50_B2S440 ATP-dependent Clp protease, subunit A n=2 Tax=Treponema pallidum RepID=B2S440_TREPS Length = 809 Score = 332 bits (850), Expect = 5e-89, Method: Composition-based stats. Identities = 152/462 (32%), Positives = 236/462 (51%), Gaps = 62/462 (13%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 ++ Q+ L A LA +++I H++ + L + ++ + + ++++ Sbjct: 5 ISASVQIILDQAFDLARKRRHEYITAEHVLFSALAHP--AALEIINLCSADIALIHSNLS 62 Query: 66 QALNRLPQVEGTGGDVQPSQDL--VRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLA 123 + L PSQ L +L + + + +++ L++ A Sbjct: 63 EFLK---TQVPVDLSHTPSQSLGFQHLLKRAVLYCEANKKSALEVGDLLVSLLQAETNYA 119 Query: 124 DI-LKAAGATTANITQAIEQMRGGESVNDQGAEDQ------------------------- 157 ++ +G +TA + + I ++ G + + Sbjct: 120 SYYMRMSGMSTARLIEVIARVNGIRHGDKNVSMGSNAQERYSESDDVGESAGHGPPLDGT 179 Query: 158 ---------------------------RQALKKYTIDLTERAEQGKLDPVIGRDEEIRRT 190 L+KYT++LTERA +G+L P+IGR +EI RT Sbjct: 180 EGDGNTADVHVHYEHCAHKRTDADTHRYTVLEKYTVNLTERARRGELAPLIGRTQEIERT 239 Query: 191 IQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAK 250 IQ+L RR KNNPV +GE GVGKTAI EGLAQRI+ +VPE L+G + +LDM +L+AG K Sbjct: 240 IQILCRRQKNNPVHVGEAGVGKTAITEGLAQRIVRCDVPEALEGVEIFSLDMTSLLAGTK 299 Query: 251 YRGEFEERLKGVLNDLAKQEGNVILFIDELH-TMVGAGKADGAMDAGNMLKPALARGELH 309 +RG+FEERLK + +L K + ILFIDE+H + G +DA N+LKP L+ G++ Sbjct: 300 FRGDFEERLKRLAEELEK-KTQAILFIDEIHTVVGTGSGGSGGLDASNLLKPLLSSGKIR 358 Query: 310 CVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPA 369 C+G+TT +EY ++ KD AL RRFQK+ + EPS E+T+ IL G++ YE H V +D A Sbjct: 359 CIGSTTYEEYTKHFRKDQALARRFQKIDIEEPSEEETLRILEGIRTLYEDFHAVHYSDEA 418 Query: 370 IVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEE 411 + AA LS +YI R LPDKAID+IDEA + ++ E Sbjct: 419 LAAAVRLSVQYIQGRHLPDKAIDIIDEAGACAKLSRGKHGTE 460 Score = 317 bits (811), Expect = 1e-84, Method: Composition-based stats. Identities = 149/435 (34%), Positives = 237/435 (54%), Gaps = 10/435 (2%) Query: 417 RRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476 R I E+ D+A +R ++ E +E + + + Sbjct: 358 RCIGSTTYEEYTKHFRKDQALARRFQKIDIEEPSEEETLR----ILEGIRTLYEDFHAVH 413 Query: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 536 E A+ + + + + I E + + G + + + +++I Sbjct: 414 YSDEALAAAVRLSVQYIQGRHLPDKAIDIIDEAGACAKLSRGKHG--TEGVCSVIGESDI 471 Query: 537 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNR 596 E++A+ IP R+ SE EKL E+ + ++ GQ EA+D V+ ++R+R GL ++ Sbjct: 472 DEIVAKIAKIPKQRVSASEIEKLRNFERSISEKIFGQGEAIDLVTRTLKRARVGLRVKHK 531 Query: 597 PIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGY 656 PI + LF+G TGVGKTEL + LA + + R DMSE+ EKH+VSRL+G+PPGYVG+ Sbjct: 532 PIANLLFVGATGVGKTELARTLAQEL---GIVLHRFDMSEYQEKHTVSRLIGSPPGYVGF 588 Query: 657 EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 716 EEGG LT+AVR++P++V+LLDE+EKAHPD+FN+LLQV+D LTD QGR DFRN ++IM Sbjct: 589 EEGGLLTDAVRKQPHAVLLLDEIEKAHPDIFNVLLQVMDYATLTDNQGRKADFRNVILIM 648 Query: 717 TSNLGSDLIQERFGELDYAHMKELVL-GVVSHNFRPEFINRIDEVVVFHPLGEQHIASIA 775 TSN G+ + + V+ V F PEF NR+D V+ F L + + IA Sbjct: 649 TSNAGARNMGVSLIGFHKGQVGTAVIDEAVERIFSPEFRNRLDAVIRFDALSLETMERIA 708 Query: 776 QIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILS 835 + +L + ++L+++ I+D+AL LL+E + GAR + R ++Q++ N LA +L Sbjct: 709 RKELALVCEQLQKKHIRFDITDDALALLAERSHSGGSGARNVARLVEQEVANVLADLMLF 768 Query: 836 GELVPGKVIRLEVNE 850 G + G +R V + Sbjct: 769 GGVAEGDALRCTVKD 783 >UniRef50_A0RNV1 ATP-dependent Clp protease ATP-binding subunit ClpA n=2 Tax=Campylobacter fetus RepID=A0RNV1_CAMFF Length = 732 Score = 328 bits (842), Expect = 4e-88, Method: Composition-based stats. Identities = 154/498 (30%), Positives = 258/498 (51%), Gaps = 47/498 (9%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGI-NAGQLRTDI 64 + N ++ A LA+ +++I H++ AL L+S G+ + LR D+ Sbjct: 2 IQNNLAKSIKQANELAISKSHEYIGVEHILYALTFDTEFL--KTLSSLGVSDPVALRNDL 59 Query: 65 NQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLA- 123 +++ P++E V L + L+ + + +E F+ LE + + A Sbjct: 60 VGLIDQFPRLESPKPPV-------LTYKLSEILSSIKEEEIFDAEDFLEEILEDKSSSAY 112 Query: 124 DILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGR 183 +LK G D++ ++ +L + + K+DPVIGR Sbjct: 113 QVLKFHGLN-----------------------DEQDDTSQFVSNLNDMVKNSKIDPVIGR 149 Query: 184 DEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMG 243 +EEI++ +++L R KNNP+ +GE GVGKTAIV+G+ Q+I+NG+VP+ LK + LD+ Sbjct: 150 EEEIQKALEILCRHKKNNPIFVGEAGVGKTAIVQGIVQKIVNGKVPDRLKNSIIFNLDVS 209 Query: 244 ALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKA-DGAMDAGNMLKPA 302 +L+AGAKYRGEFEERLK +++ L K+ N I+FIDE+H+++ + + ++D N+LKP Sbjct: 210 SLIAGAKYRGEFEERLKSIISKL-KENKNHIIFIDEIHSIMSQNSSNENSLDVANILKPH 268 Query: 303 LARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHH 362 LA G++ C+GATT E+R KD AL RRF K+ V+EP+ ++ IL+GLK YE H+ Sbjct: 269 LANGDIRCIGATTYSEFRN-FNKDKALLRRFNKIDVSEPNPDECFLILKGLKSTYEKFHN 327 Query: 363 VQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAAS--------SIRMQIDSKPEELDR 414 V +D + + L+ RY++D+ LPD AID+IDE + + ++ ++ Sbjct: 328 VTYSDEILKLSIELAKRYLSDKFLPDSAIDIIDETGAKLSIANPNKLNLKDETVWSYAIN 387 Query: 415 LDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQT 474 +D L+ + K + + + D+LN K S L E K + Sbjct: 388 VDDEFDNLEAIKNEAEKNNSKKRVLKSDILNT--VSKMANISNLNENSDNTKILKNLKAN 445 Query: 475 IKAELEQAKIAIEQARRV 492 +KA++ AI+ Sbjct: 446 LKAKIFGQDSAIDALNDA 463 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 128/341 (37%), Positives = 198/341 (58%), Gaps = 10/341 (2%) Query: 511 KQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRV 570 LEA K + +V ++I +++ I + L ++ L ++ Sbjct: 393 DNLEAIKNEAEKNNS--KKRVLKSDILNTVSKMANISNLNENSDNTKILKNLKANLKAKI 450 Query: 571 IGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMV 630 GQ+ A+DA+++A+ S AGL +PN+PIG FLF G +GVGK+EL LAN + + Sbjct: 451 FGQDSAIDALNDALISSYAGLNEPNKPIGIFLFTGSSGVGKSELANELANSL---NVHFE 507 Query: 631 RIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNIL 690 R DMSE+MEKHSVSRL+GAPPGY+G+E GG LT V++ PYSVIL DE+EKA+ ++ NI Sbjct: 508 RYDMSEYMEKHSVSRLIGAPPGYIGFESGGLLTNMVKKHPYSVILFDEIEKANDEMINIF 567 Query: 691 LQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFR 750 LQ+ D LTD G DF+NT++IMTSNLG+ +E ++ + V F Sbjct: 568 LQIFDSASLTDNSGNKSDFKNTIIIMTSNLGT---KEPNTLGFNKNLSDKTDKAVKGFFS 624 Query: 751 PEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDP 810 EF NRID+++ F+ L + + I + ++ L K + +I++S +AL + G+ Sbjct: 625 SEFRNRIDKIIRFNDLSKDILEKIVEKEISNLEK--MAKKIKINLSKKALNEIINQGFSD 682 Query: 811 VYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNED 851 YGAR LKR I+ I + +++++L G L G + +E + + Sbjct: 683 EYGARNLKRVIKDSINSSISKELLFGSLKRGGEVYIEFDGE 723 >UniRef50_A8RF26 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RF26_9FIRM Length = 682 Score = 328 bits (842), Expect = 4e-88, Method: Composition-based stats. Identities = 158/468 (33%), Positives = 256/468 (54%), Gaps = 29/468 (6%) Query: 5 RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDI 64 R+ + + L A+ A N +I H++ AL+ +S +L+S G+ QL+ D+ Sbjct: 33 RMDQQVKALLECAKQEARDMGNNYIGSEHILLALMKDIHTPLSRILSSQGMYYFQLKEDL 92 Query: 65 NQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLAD 124 Q + G++Q +Q + ++ +KLA++R +S E+ +A L+S +A+ Sbjct: 93 MILFGLKDQ---SIGEIQMTQIVENMMGAAEKLAEERNQRQLSVEVVSIALLKSGSCVAN 149 Query: 125 -ILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGR 183 IL + +E E L KY+ +G D ++GR Sbjct: 150 EILHRYDLDEEVLLLQLENGLISE-------------LDKYSELRNLNRTEGYAD-IVGR 195 Query: 184 DEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMG 243 EE+ + VL R+ K NP+L+GE GVGKTA+VE LA+ I ++ +GL+ ++ L++ Sbjct: 196 KEELDFMVSVLLRKDKANPLLVGEAGVGKTALVEQLARDIRYKKI-KGLEDTQIYELNLN 254 Query: 244 ALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPAL 303 ALVAG KYRG+FEE+L+ ++ L K VILFIDE+H M+GAGK++G++D ++LKP L Sbjct: 255 ALVAGTKYRGDFEEKLQKIIRLLQKYP-EVILFIDEIHQMIGAGKSEGSIDVASVLKPYL 313 Query: 304 ARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHV 363 ARG + C+GATTL+EY +YIEKD ALERRFQ + + EPS+E +L ++ YE HHV Sbjct: 314 ARGSIRCIGATTLEEYEKYIEKDRALERRFQIIHIQEPSLEQVYTMLEAKQKEYESFHHV 373 Query: 364 QITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLK 423 + + A+ + YI R+ PDKAID++D A +++K ++ +D+ +IQ Sbjct: 374 SVCEEALRCIVHYCNCYIPQRKFPDKAIDVLDLAC------VETKKQQQTNVDKIMIQKV 427 Query: 424 LEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSG 471 +EQ + + S R + EEL + S + + + A + Sbjct: 428 IEQ---LTDIPLVSYNRFHYVKEELQKRVIGQSTVVAKLLKQLAWIEQ 472 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 65/347 (18%), Positives = 125/347 (36%), Gaps = 43/347 (12%) Query: 446 EELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGK 505 EE + LE ++ + + LE + E V Sbjct: 327 EEYEKYIEKDRALERRFQIIHIQEPSLEQVYTMLEAKQKEYESFHHVSVCEEALRCIVHY 386 Query: 506 ----IPE---LEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 558 IP+ +K ++ +T + + V I +V+ + T IP+ + Sbjct: 387 CNCYIPQRKFPDKAIDVLDLACVETKKQQQTNVDKIMIQKVIEQLTDIPLVS-----YNR 441 Query: 559 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 618 +++EL RVIGQ+ V + + G+ ++P+G +LFLG VGK + Sbjct: 442 FHYVKEELQKRVIGQSTVVAKLLKQLAWIEQGVL-TDKPLGVWLFLGNAHVGKEYVIDVF 500 Query: 619 ANFMFDSDEAMVR--IDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILL 676 F +E + I M E +H++ +L RR+PYS++ + Sbjct: 501 NRCYFHCEERVEINAIGM-EGTLEHALVKL--------------------RRKPYSLVQI 539 Query: 677 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAH 736 + A+ Q G + G + VD R+++VI+ + + E Sbjct: 540 SNLHLANEATLLFFQQAFQKGYIWHG-NQKVDLRHSIVILQGDF------DITQENILHF 592 Query: 737 MKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLY 783 + + F+ IDE+ +F L + I + +++ Sbjct: 593 QPQDPYIGLKKCLGEAFLEVIDEIFLFADLQVEDKIQIVKEIVRKWN 639 >UniRef50_C3RJA5 ATPase n=3 Tax=Bacteria RepID=C3RJA5_9MOLU Length = 665 Score = 324 bits (831), Expect = 8e-87, Method: Composition-based stats. Identities = 138/469 (29%), Positives = 248/469 (52%), Gaps = 22/469 (4%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 L + + Q A+ +S+A + + HL+ +LL + L+ ++ + Sbjct: 1 MLTKFDEQAQKAIVVGESIAFDLGHNNVGSEHLLLSLLKISDSKLRELVKKYDVDDKNIY 60 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGT 121 DI + + ++ S + +L ++ ++ + ++ + +A L+S + Sbjct: 61 EDIKRLFG---TNDDQPFYMEYSDAVKSILEAAMEITNQQNKSKVTLNILTIALLQSEES 117 Query: 122 LA-DILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPV 180 +A ++LK I + ES + DQ Q+L ++L ++ +QG+ + Sbjct: 118 VAHELLKKYKVDFEEIIYQL-----NESSELETKLDQIQSL----VNLNKKVKQGE-HLI 167 Query: 181 IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL 240 +GR +E+ + +L ++ KNN ++IGE GVGK+A+VE LA I +V EGLK + + L Sbjct: 168 VGRQKELEKLCMILSKKEKNNALIIGEAGVGKSALVEKLAYLINQKQVNEGLKKKIIYEL 227 Query: 241 DMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLK 300 + ++VAG KYRGEFEE+L+ +++ + K+ NVI+FIDE+H ++GAG A+GA+DA N+LK Sbjct: 228 SLSSIVAGTKYRGEFEEKLRKIIDKV-KEMDNVIIFIDEIHNIIGAGGAEGAIDAANILK 286 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELH 360 P LAR +L +GATT +EY Q+ EKD A+ RRF + + E + E+T+ IL+ K YE Sbjct: 287 PYLARKDLTIIGATTTEEYFQHFEKDQAMNRRFSVITLKENTKEETLEILQKTKLFYEQF 346 Query: 361 HHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRII 420 H +++ + + RYI +R PDKAID+ D A R ++ + ++I+ Sbjct: 347 HQIEVDNEVLTYLVDNVDRYIKNRTFPDKAIDIFDLACVKAR------FKQQHIITKQIV 400 Query: 421 QLKLEQQALMK-ESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKAS 468 + +E+ +K D + LN + + + ++ + K K S Sbjct: 401 KDVIEEYTSVKISEDYDYDEIKAKLNHHIIGQSKAIEQIINQLKLTKQS 449 Score = 198 bits (504), Expect = 7e-49, Method: Composition-based stats. Identities = 95/390 (24%), Positives = 181/390 (46%), Gaps = 39/390 (10%) Query: 446 EELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGK 505 EE + + + + + L++ K+ EQ ++ + Sbjct: 303 EEYFQHFEKDQAMNRRFSVITLKENTKEETLEILQKTKLFYEQFHQIEVDNEVLTYLVDN 362 Query: 506 IPEL-------EKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 558 + +K ++ K ++ +T + +V+ +T + +S E Sbjct: 363 VDRYIKNRTFPDKAIDIFDLACVKARFKQQHIITKQIVKDVIEEYTSVKIS-----EDYD 417 Query: 559 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 618 ++ +L+H +IGQ++A++ + N ++ ++ +P LF+G +GVGK+E K L Sbjct: 418 YDEIKAKLNHHIIGQSKAIEQIINQLKLTK----QSKQPSAVMLFVGNSGVGKSESAKQL 473 Query: 619 ANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678 + + ++R+DMSE+ + SV +++GA PGYVGY++ L ++ P S+ILLDE Sbjct: 474 SKLL---GRKLIRLDMSEYRDSSSVQKIIGAAPGYVGYDKPSLLLGQLQTYPKSIILLDE 530 Query: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK 738 ++KA DV N+ LQV D+G L D R V F NT++IMTSN G+ F + +++ Sbjct: 531 IDKASQDVINLFLQVFDEGYLEDSHKRKVYFNNTIIIMTSNKGTAKNTLGFKKNNHS--- 587 Query: 739 ELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE 798 V + F E ++RIDE++ F L + + I + + +E Sbjct: 588 ----SKVKNFFSDELLSRIDEIINFKNLTKMDLKKIIRKNCPH------------EVKEE 631 Query: 799 ALKLLSENGYDPVYGARPLKRAIQQQIENP 828 ++L+ + YD R + +A + +N Sbjct: 632 DIELILKE-YDMKLQGRGIVKAANKYFQNK 660 >UniRef50_A9FU98 Endopeptidase ATPase with chaperone activity,two ATP-bindingdomains n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FU98_SORC5 Length = 945 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 159/325 (48%), Positives = 209/325 (64%), Gaps = 13/325 (4%) Query: 530 KVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA 589 +V AE+AEV++ +PV R++E++RE++L +E L V+G EA+ ++ +RR+ A Sbjct: 593 QVGPAEVAEVVSELADLPVERLLETDRERMLSLETLLAENVVGHGEALSRIARVLRRNAA 652 Query: 590 GLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGA 649 GL RPIGSFL LGPTGVGKTE KA+A +F S +AM R+D SE+ E H+V+RLVGA Sbjct: 653 GLR-ARRPIGSFLLLGPTGVGKTETAKAIAEALFHSPDAMTRLDFSEYAESHAVARLVGA 711 Query: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709 PPGYVG+E GG LTEAVRRRPY V+LLDE+EKAH DV LQV D+GRLTDG+GR VDF Sbjct: 712 PPGYVGHEAGGQLTEAVRRRPYQVVLLDEIEKAHRDVLEAFLQVFDEGRLTDGRGRRVDF 771 Query: 710 RNTVVIMTSNLGSDLIQERFGE-----------LDYAHMKELVLGVVSHNFRPEFINRID 758 NTV++MTSNLG+ E + + E +L PE NRID Sbjct: 772 TNTVLVMTSNLGAAEAGALRSERSVGFARSSSAVSPERLGETMLSAARAALPPELYNRID 831 Query: 759 EVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSEN-GYDPVYGARPL 817 EV+ F PL +A I + L L + LE RG E+ + EA+ L + G+DP GARP+ Sbjct: 832 EVLCFAPLTRADVAEITRRLLGGLERELEARGVELEVEPEAIDALLDAGGFDPELGARPM 891 Query: 818 KRAIQQQIENPLAQQILSGELVPGK 842 KR I + +E PLA+ IL G+L G Sbjct: 892 KRTIARLVEAPLAELILRGQLEEGS 916 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 123/452 (27%), Positives = 199/452 (44%), Gaps = 20/452 (4%) Query: 154 AEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKT 213 + AL +L+ A QG+L+P++GR+ EI + + VL +R NNP L+G GVGKT Sbjct: 320 DRARFPALASLGHNLSLAAVQGELEPIVGREHEIEQALDVLAKRHANNPCLLGPAGVGKT 379 Query: 214 AIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNV 273 ++ G+A R+ E + R V+ L L+AG RG ERL + +++ + G V Sbjct: 380 SVARGVAHRLAFDER----EPRVVVELVPSELLAGTGARGALSERLSALRSEVREAGGRV 435 Query: 274 ILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRF 333 ILFID L + G+G D AM +K ALARGEL +G T +EYR+ IE D AL RRF Sbjct: 436 ILFIDGLSELFGSGALDEAM---AEIKLALARGELTMIGTATPEEYRKSIEVDPALARRF 492 Query: 334 QKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDL 393 V + EP ++ +L+ + HH + TD A+ +A S RY+ R LPDKA+ + Sbjct: 493 TIVEIDEPEEDEAFLLLQSVAVGLGAHHGLAFTDEALASAVAWSVRYLPGRALPDKALSI 552 Query: 394 IDEAASSIRMQIDSKPEELDRLD----RRIIQLKLEQQALMKESDEASKKRLDMLNEELS 449 +D A + R + S + Q A E ++ ++ + + Sbjct: 553 LDLAGARTRRRASSASRASRASRTSHAAHAALHEPAQPARQVGPAEVAEVVSELADLPVE 612 Query: 450 -----DKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504 D+ER S + I L + + R +G + G Sbjct: 613 RLLETDRERMLSLETLLAENVVGHGEALSRIARVLRRNAAGLRARRPIGSFLLLGPTGVG 672 Query: 505 KIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQ 564 K + EA RL ++ ++ +AR G P + +L + Sbjct: 673 KTETAKAIAEALFHSPDAMTRLDFSEYAESH---AVARLVGAPPGYVGHEAGGQLTEAVR 729 Query: 565 ELHHRVIGQNEAVDAVSNAIRRSRAGLADPNR 596 ++V+ +E ++ + + + D R Sbjct: 730 RRPYQVVLLDE-IEKAHRDVLEAFLQVFDEGR 760 >UniRef50_D1PH53 ATP-dependent Clp protease, ATP-binding subunit ClpA n=1 Tax=Prevotella copri DSM 18205 RepID=D1PH53_9BACT Length = 761 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 160/512 (31%), Positives = 261/512 (50%), Gaps = 38/512 (7%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M LT + + DA A D++F+ P H++ ALL Q + L G+++ ++ Sbjct: 1 MDSMGLTRYMSVLMDDAMKQARFFDHEFVMPEHMLLALLRQY--AFCQALQEEGVDSFKM 58 Query: 61 RTDINQALNRLPQVEGTGGDVQ-PSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESR 119 D+ L + +V T + PS + LA ++ FV A + Sbjct: 59 HEDLVGWLAKQERVPETIKYLPEPSSLFKTMFGTACALAAAADRQLVNVPHFVQAMFGLQ 118 Query: 120 GTLADIL--KAAGATTANITQAIEQ------------MRGGESVNDQGAEDQR------- 158 + A L K G +++ M G +D ++ Sbjct: 119 NSEAAFLLCKNVGDRQGEFLASVDSYYPIGEDTGEAGMGMGADFDDDDYANEYDDDEEEG 178 Query: 159 -----QALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKT 213 Q + ++++ E+ +P+IGR++E+ RTIQVL R KNNP+ IGE GVGKT Sbjct: 179 RRQVVQDWHQLVTCISDKVEEH--NPLIGREQELDRTIQVLCRAEKNNPLHIGEAGVGKT 236 Query: 214 AIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNV 273 A+V GLA+ I +VPE LKG R+ +DMG ++AGA+YRG+FE+R+K V+ K EGN Sbjct: 237 ALVYGLAKLINENQVPERLKGARIYGMDMGQMLAGAQYRGDFEKRIKMVMEGAVK-EGNT 295 Query: 274 ILFIDELHTMVGAGK-ADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERR 332 I++IDE+H M+GAG+ +DG DA NMLK L G++ +G+TT +EY +Y+ + + RR Sbjct: 296 IIYIDEIHNMIGAGRGSDGGPDASNMLKQYLEAGDIRFIGSTTYEEYNRYMAQSKGIVRR 355 Query: 333 FQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAID 392 FQ++ + EP+ E+ I IL GL+ +Y H+V A+ A S +YI++R LPDKAID Sbjct: 356 FQQIDIKEPTEEEAIKILEGLQYKYNKFHNVTYRKDALEYAVRASAKYISNRCLPDKAID 415 Query: 393 LIDEAASSIRMQIDSKPEELDRLDRRIIQL-----KLEQQALMKESDEASKKRLDMLNEE 447 L+DEA + + + + I Q+ K++ A+ E+++A + ++ Sbjct: 416 LMDEAGAYLEVHPVESRQRSYVTKSIIQQILIKVCKIDAAAMKDENNDALATLRQRILDK 475 Query: 448 LSDKERQYSELEEEWKAEKASLSGTQTIKAEL 479 + +++ ++ E KA L+ A L Sbjct: 476 IYGQDKAVDKVVEAVMMAKAGLTDDDKPLASL 507 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 138/374 (36%), Positives = 219/374 (58%), Gaps = 5/374 (1%) Query: 483 KIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLAR 542 K A+E A R + K +L + A ++ R R+ VT + I ++L + Sbjct: 390 KDALEYAVRASAKYISNRCLPDKAIDLMDEAGAYLEVHPVESR-QRSYVTKSIIQQILIK 448 Query: 543 WTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFL 602 I + M + + L + Q + ++ GQ++AVD V A+ ++AGL D ++P+ S L Sbjct: 449 VCKIDAAAMKDENNDALATLRQRILDKIYGQDKAVDKVVEAVMMAKAGLTDDDKPLASLL 508 Query: 603 FLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYL 662 F+GPTGVGKTE+ + LA + +VR DMSE+ EKH+V++L+G+P GYVGYE+GG L Sbjct: 509 FVGPTGVGKTEVARQLAKEL---GIELVRFDMSEYTEKHTVAKLIGSPAGYVGYEDGGLL 565 Query: 663 TEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGS 722 T+A+R+ P V+LLDE+EKAH D++NILLQV+D RLTD +G+ DFRN ++IMTSN G+ Sbjct: 566 TDAIRKTPNCVLLLDEIEKAHSDIYNILLQVMDYARLTDNKGQKADFRNVILIMTSNAGA 625 Query: 723 DLIQE-RFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKR 781 G E +L V F+PEFINR+ ++VVF+ + + I +L++ Sbjct: 626 QYASRASVGFNGNVSRGEAMLAQVKKTFKPEFINRLSDMVVFNDMDKHMAELILAKKLRQ 685 Query: 782 LYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPG 841 L +L +G + ++D A + L + G+ YGAR + RAI +++ L + +L G+L G Sbjct: 686 LDAKLAAKGVTVTLTDAAREQLLKWGFTKEYGAREMDRAIGNRLKPILMKALLFGKLKKG 745 Query: 842 KVIRLEVNEDRIVA 855 ++ + +V Sbjct: 746 GKAHVDFDGKELVV 759 >UniRef50_A7H2P9 ATP-dependent Clp protease, ATP-binding subunit ClpA n=16 Tax=Campylobacter RepID=A7H2P9_CAMJD Length = 709 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 152/475 (32%), Positives = 250/475 (52%), Gaps = 22/475 (4%) Query: 5 RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSA-GINAGQLRTD 63 + Q L +A++L+L + ++F+ H++ ALL + + L T+ Sbjct: 2 KYQENLQKYLDNAKNLSLINHHEFVTCEHVLFALLKL-STDFKDIFEEFSDGDLELLETE 60 Query: 64 INQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLA 123 + +++ +V +++P+ + VL+ L++ + + + +SR + Sbjct: 61 LKNHISQNNKV--IKQEIEPTISV--VLDEILLLSKNKNNEIKIIDFLEKLIQDSRSYSS 116 Query: 124 DILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGR 183 +LK I + + Q L +T DLT A+ GK+DP+IGR Sbjct: 117 YLLKKHNINLNKIQEL-------------QNHENIQNLSNHTSDLTLLAQNGKIDPLIGR 163 Query: 184 DEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMG 243 E+ R +Q+L RR KNNP+L+GE GVGKTAIVEGLA I +VP+ L+ ++ +LDM Sbjct: 164 KFELERMMQILSRRKKNNPILVGEAGVGKTAIVEGLALAIAEKKVPKNLQNAKIFSLDMA 223 Query: 244 ALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGA-MDAGNMLKPA 302 +++AG KYRG+FE+R+K +LN+L K N ILFIDE+HT+VGAG + D N+LKPA Sbjct: 224 SILAGTKYRGDFEKRIKEILNELEKIP-NAILFIDEIHTIVGAGSTGESHTDFSNLLKPA 282 Query: 303 LARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHH 362 L+ G L C+GATT EY+ +K+ L RRF K+ V EPS E+++ IL+GLK +YE HH Sbjct: 283 LSNGTLKCIGATTFMEYKNTFDKNKPLSRRFAKINVDEPSQEESLQILKGLKNKYEEFHH 342 Query: 363 VQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDR-LDRRIIQ 421 +++ D + A ++ D+ LPD AIDL+DE +S + +K + L + + Sbjct: 343 IKLNDEILQYAVIWGKKFFNDKFLPDCAIDLVDELGASFALNPKAKKNANLKDLKNVLAK 402 Query: 422 LKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476 + + + ++A L ++ ++ L K A + T + Sbjct: 403 MTHHHKMFEFDQNKALMNLKTNLKAKIFGQDEVIDSLVSSLKQSFAGFKNSNTPR 457 Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 131/411 (31%), Positives = 226/411 (54%), Gaps = 17/411 (4%) Query: 449 SDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGK--- 505 DK + S + ++ S + I L+ + ++ + + + K Sbjct: 303 FDKNKPLSRRFAKINVDEPSQEESLQILKGLKNKYEEFHHIKLNDEILQYAVIWGKKFFN 362 Query: 506 ---IPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK-LLR 561 +P+ L + ++ VLA+ T +M E ++ K L+ Sbjct: 363 DKFLPDCAIDLVDELGASFALNPKAKKNANLKDLKNVLAKMTH--HHKMFEFDQNKALMN 420 Query: 562 MEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANF 621 ++ L ++ GQ+E +D++ +++++S AG + N P G FLF G +GVGKTELCKALA F Sbjct: 421 LKTNLKAKIFGQDEVIDSLVSSLKQSFAGFKNSNTPRGVFLFTGSSGVGKTELCKALAEF 480 Query: 622 MFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEK 681 + + R DMSE+ EKH++S+L+G+P GY+G+EEGG L+ A+R+ P+S++L DE+EK Sbjct: 481 L---GLNLERFDMSEYAEKHAISKLIGSPAGYIGFEEGGLLSNAIRKNPFSLVLFDEIEK 537 Query: 682 AHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELV 741 AHPD+ N LQ+ D+ LTD G VDF+NT++IMTSNLG ++E + +E Sbjct: 538 AHPDLSNTFLQIFDNAELTDNSGLKVDFKNTIIIMTSNLG---LKESNELGFLSKNEEKS 594 Query: 742 LGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALK 801 + F PEFINRID+++ F+ L + + I + +L + K L ++ + D+A Sbjct: 595 NRAIKDFFAPEFINRIDKILHFNDLNDAILVKIIEKELDEISKNLN--NIKLSVDDKAKI 652 Query: 802 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDR 852 L++ Y+ +G R LKR I ++I ++ +IL G+L G + ++++ ++ Sbjct: 653 YLAKKAYNKEFGVRLLKRIISEEIGEKISDEILFGKLKKGGIAKIKLGKNG 703 >UniRef50_B9Y438 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y438_9FIRM Length = 665 Score = 323 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 141/423 (33%), Positives = 233/423 (55%), Gaps = 19/423 (4%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M+ + + Q A+ A+++A N FI HL+ +L + ++ LL+ GI A QL Sbjct: 1 MKTN-FDPQAQKAIQSARTVARQMKNTFIGTEHLLIGILQTDHSALQKLLSERGITAEQL 59 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG 120 + DI E + +Q + +L C A + I+ ++ LE+ Sbjct: 60 KEDIQVLFG---FNEEETRQTEYTQTVQEILEKCLVEAARSTPPVITLKMLTRTLLETPN 116 Query: 121 TLA-DILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDP 179 +A ++L+ A + + + + ++ + + + L ++ + + Sbjct: 117 NVASELLRRYDVDIAGLIVELNR----QDIDSLNSIRELRNLNQWMAN--------RPSN 164 Query: 180 VIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLA 239 ++ R ++ I++L R+ K NP+L+G+PGVGKTA+VE LA+ I GEVP+ L+G + Sbjct: 165 IVERQAQMNSIIRILCRKEKANPLLLGDPGVGKTALVEQLAKSIDQGEVPDCLRGSVIFE 224 Query: 240 LDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNML 299 L + LVAG KYRGEFEE+++ +L+ L + VILFIDE+H ++GAGKA+G++D +L Sbjct: 225 LSVNGLVAGTKYRGEFEEKIQKILDALRQFP-QVILFIDEIHQIIGAGKAEGSIDVAGVL 283 Query: 300 KPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYEL 359 KP LARGE+ C+GATT DEY ++IEKD AL+RRFQ V + EP ++ ++ YE Sbjct: 284 KPVLARGEIRCIGATTYDEYLKFIEKDRALQRRFQPVMIEEPDLDSARRMIEAKIPEYEQ 343 Query: 360 HHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRI 419 HH +Q + + ++ R+LPDKA+D+ID A +S RM S + D +D+ + Sbjct: 344 HHQIQFPMELVGPLMESTQYFMPSRKLPDKALDVIDLACASARMDHRSTVAQRD-VDQIL 402 Query: 420 IQL 422 QL Sbjct: 403 EQL 405 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 72/378 (19%), Positives = 154/378 (40%), Gaps = 31/378 (8%) Query: 451 KERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELE 510 +R++ + E ++ + E EQ VG L ++ + Sbjct: 313 LQRRFQPVMIEEPDLDSARRMIEAKIPEYEQHHQIQFPMELVGPLMESTQYFMPSRKLPD 372 Query: 511 KQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRV 570 K L+ R+ V ++ ++L + T +P+ +R + R+ Q L + Sbjct: 373 KALDVIDLACASARMDHRSTVAQRDVDQILEQLTDVPLQ-----DRCRKDRVMQRLRREL 427 Query: 571 IGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMV 630 IGQ E + + ++ G+ +RP+G +L G K L K LA F ++ + Sbjct: 428 IGQEEILTQIDQQLQWMELGVVQ-DRPLGVWLLCGKQVSLKQRLAKVLAQLYFGQNDRRI 486 Query: 631 RIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLT-EAVRRRPYSVILLDEVEKAHPDVFNI 689 +DM ++ + + R V G ++ L E +RR PYS++ + ++ A P+ I Sbjct: 487 EVDMMDYQDSQAGYRFVH------GQDQQYSLWLEKLRRSPYSLLFIRNLDAARPECAAI 540 Query: 690 LLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNF 749 L + ++ G + + GR VD R+ ++++ + + L VS Sbjct: 541 LRKGIEQGLIEEEAGRKVDLRHCLILLDTEQS-------------RTVSGLGFQAVSVKM 587 Query: 750 RPEFINRI-DEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGY 808 E + I D ++ F L + ++A+ +L+ + +++ + +E+ G Sbjct: 588 ENEGWDEIADAILDFRTLDSAEMETLARRRLQEITRQMPQLAFELGEDTP----FDIEGE 643 Query: 809 DPVYGARPLKRAIQQQIE 826 DP R ++ + ++ + Sbjct: 644 DPEKIDRQIRSYLTKRFK 661 >UniRef50_A3A5U3 Putative uncharacterized protein n=2 Tax=Oryza sativa RepID=A3A5U3_ORYSJ Length = 691 Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats. Identities = 174/475 (36%), Positives = 257/475 (54%), Gaps = 35/475 (7%) Query: 390 AIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELS 449 A +++ A + R++ + + E++ E S + L Sbjct: 192 ASNMLKPALARGRVRCLGATTHDEYHRYMVRDAAFERRFQKVHVAEPSVDDTVAILRRLK 251 Query: 450 DKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPEL 509 + + S ++ A AR + D + + Q P+ Sbjct: 252 PSYQDHHAWISRTPPSSPPPSSPVATSQAIDLVDEACATARLLMDRRKKKQAQAAVAPKD 311 Query: 510 EKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHR 569 E V IA +WTGIPV+ + E ER+KLL + Q LH R Sbjct: 312 E-------------------NVGPDHIA----QWTGIPVASLGEDERKKLLELPQLLHRR 348 Query: 570 VIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAM 629 VIGQ+EAV AV+ A+ RSR+GL +PN+P GSFLFLGPTGV KTEL KALA +F + + + Sbjct: 349 VIGQDEAVGAVAEAVVRSRSGLGNPNQPSGSFLFLGPTGVSKTELAKALAEQLFGNAKLL 408 Query: 630 VRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNI 689 VRIDMSE++ SV+RL+G+ PG GY++GG LTE VR RPYSV+L DEVEKA VFN+ Sbjct: 409 VRIDMSEYVNASSVTRLIGSAPGTNGYDKGGQLTELVRCRPYSVVLFDEVEKADAAVFNV 468 Query: 690 LLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFG----------ELDYAHMKE 739 LQ+LDDGRLTDGQGRTVDF NT++IMTSNLG+ + + E A K+ Sbjct: 469 FLQILDDGRLTDGQGRTVDFTNTIIIMTSNLGAQHLADAAAADASHKDDATEAAAAAAKQ 528 Query: 740 LVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEA 799 VL V +FRPE I+R+ E+VVF PL + + +A++QL+ + RL E+G + +++ A Sbjct: 529 RVLADVQRHFRPELISRLTEMVVFRPLSGEQLRKVARLQLRGMAARLAEKGIGLDVANAA 588 Query: 800 LKLLSENGYD--PVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDR 852 L ++ D YGARP+KR +++ + +++ ++ E + +E ++ + Sbjct: 589 LDVVLARSSDQVRAYGARPIKRCLEKDVMTRISKMVVQEEADDDCYVTVEADQGK 643 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 124/260 (47%), Positives = 171/260 (65%), Gaps = 14/260 (5%) Query: 158 RQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVE 217 + L + DLT A DPV+GR+EEI R + +L R++KN+ VL+G GVGKTAI E Sbjct: 52 KGTLDAFGRDLTAEAANA--DPVVGREEEIDRVVCILSRKSKNSAVLVGAAGVGKTAIAE 109 Query: 218 GLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVL----NDLAKQEGNV 273 GLAQRI GEV L+G RV+ L++ A+++G YRG FEER+ GV+ + G V Sbjct: 110 GLAQRIARGEVSGVLEGARVVELNVAAMISGTSYRGTFEERMTGVIAEAEAEADAAAGKV 169 Query: 274 ILFIDELHTMVGAGKADGA-MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERR 332 +LF+DE+H ++GAG+ G +DA NMLKPALARG + C+GATT DEY +Y+ +DAA ERR Sbjct: 170 VLFVDEIHMLLGAGRVSGGCIDASNMLKPALARGRVRCLGATTHDEYHRYMVRDAAFERR 229 Query: 333 FQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAID 392 FQKV VAEPSV+DT+AILR LK Y+ HH A ++ S + +AID Sbjct: 230 FQKVHVAEPSVDDTVAILRRLKPSYQDHH-------AWISRTPPSSPPPSSPVATSQAID 282 Query: 393 LIDEAASSIRMQIDSKPEEL 412 L+DEA ++ R+ +D + ++ Sbjct: 283 LVDEACATARLLMDRRKKKQ 302 >UniRef50_A5UYN2 ATPase AAA-2 domain protein n=1 Tax=Roseiflexus sp. RS-1 RepID=A5UYN2_ROSS1 Length = 786 Score = 318 bits (815), Expect = 6e-85, Method: Composition-based stats. Identities = 150/420 (35%), Positives = 235/420 (55%), Gaps = 25/420 (5%) Query: 7 TNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEG------------------GSVSP 48 + L L A + A ++ +EP H+ ALL E G + Sbjct: 4 SPGVSLILVLAVAEAQLTESSHLEPEHIFLALLKSEDISTETVPGMPQVSLAAATGEIQR 63 Query: 49 LL---TSAGINAGQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNF 105 + GI+A +LR + + + + G + SQ + N + LA + + Sbjct: 64 IAAFWQQEGISAKRLRRRLRAIVREMSKSRGEFSGHR-SQRGRELFNKAETLAWQNQRDN 122 Query: 106 ISSELFVLAALESRGTLADIL-KAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKY 164 ++ ++ +LE D+L + + + ++ + Q L KY Sbjct: 123 VTPFDLLVCSLEIESKAIDMLFQEMNLERQKLLERARELLAWTPETQRKEISQEHRLAKY 182 Query: 165 TIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRII 224 DLT A G+L PVIGR EEI++ ++L +R+KNNP+L+G+PGVGKTAI EGLA Sbjct: 183 GRDLTALARAGRLGPVIGRAEEIKQIARILVQRSKNNPLLLGDPGVGKTAIAEGLASYAA 242 Query: 225 NGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMV 284 + L+ + + + AL++GA YRG+FEER++ V+ + A+Q+ N++LF+DE+HT++ Sbjct: 243 SENAVTPLRDFYFVEISVAALLSGAMYRGQFEERVQEVI-ETARQDKNLVLFLDEIHTLM 301 Query: 285 GAGKADGA-MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSV 343 G+G + +DA NMLKPALARG++ C+GATT+DEYR++IE D AL RRFQ V++ EPS Sbjct: 302 GSGAGGSSTLDAANMLKPALARGDIRCIGATTIDEYRKHIEPDGALARRFQIVWIDEPSP 361 Query: 344 EDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRM 403 +T+ ILRGL+ + + HH ++I D A+ A +LS RYI D PDKAI ++DEA + R+ Sbjct: 362 TETLHILRGLRSKMQEHHQIEIPDEALQKAVSLSGRYITDGYQPDKAITVLDEACARRRL 421 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 136/340 (40%), Positives = 209/340 (61%), Gaps = 9/340 (2%) Query: 522 KTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVS 581 ++ + + +I +V+AR T IP+ +++S+ E+LL +E+EL RV+GQ+EAV V+ Sbjct: 427 QSSPTQTSHLEVEDIGQVVARRTQIPLEVILQSDEERLLHLEEELGKRVLGQDEAVRTVA 486 Query: 582 NAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKH 641 A+R SR GL P +PI +F GPTG GKTEL KAL+ +F ++ +DMSE+ E H Sbjct: 487 EAVRISRVGLRAPGKPI-VLMFAGPTGTGKTELAKALSETLFFDPNRLITLDMSEYQESH 545 Query: 642 SVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTD 701 SV++L+G+PPGY+G+ E YL +R PYSV+LLDE+EKAHP V + LQV D+GRLTD Sbjct: 546 SVAKLIGSPPGYIGFGEEPYLVRELRLHPYSVVLLDEIEKAHPSVLTVFLQVFDEGRLTD 605 Query: 702 GQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFR--------PEF 753 +GR ++ + I+TSNLG+ + +R ++ + +V N + PE Sbjct: 606 ARGRRINCGEAIFILTSNLGASIEVKRPIGFQGMEAEQHIAALVEANVKQIIAARLSPEL 665 Query: 754 INRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYG 813 +NR+ VVVF L E+ + +I + ++ L ++L ER I + A L E GY +G Sbjct: 666 VNRLQAVVVFRSLDEKTLDAILDLYVQGLNRQLAERQISIAMDASAKAFLIEQGYSAEFG 725 Query: 814 ARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRI 853 AR LKRA ++ I PL+++ILSG+L G+ I + ++ Sbjct: 726 ARHLKRAFERLIAEPLSREILSGKLKAGQQIIFFMEAGQL 765 >UniRef50_A7HAC7 ATPase AAA-2 domain protein n=6 Tax=Cystobacterineae RepID=A7HAC7_ANADF Length = 840 Score = 317 bits (813), Expect = 9e-85, Method: Composition-based stats. Identities = 237/870 (27%), Positives = 389/870 (44%), Gaps = 80/870 (9%) Query: 9 KFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQAL 68 + +A+A +A Q + H + A LL GI+ +L + Sbjct: 9 ELAQVIAEAADIAASVK-QKLTSAHQLLAFFTVPN-RAEILLKERGIDEDRLLAAM---- 62 Query: 69 NRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKA 128 TG +P L + ++A+ G + ++A R + A L Sbjct: 63 --------TGKPKEPEGVLRDLRERSREVAESVGAEEVDCLHLLIAMGRVRASAAHQLLG 114 Query: 129 AGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIR 188 A + + + S+ + E Q ++ LT +++ Sbjct: 115 ACGLQLSTLRNVALSYFTASMPRRLRELQPVQVRP-AQPLTPPRRSEPRARAADPSRDLQ 173 Query: 189 R---TIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRII----NGEVPEGLKGRRVLALD 241 Q L T + + P G +A + ++ + + PE R ++ D Sbjct: 174 LDAHLEQALGDATATDGEAV-HPERGVSAAADTRSRGTTPPPTSTDAPEAAHPERSVSAD 232 Query: 242 MGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKP 301 A + RG + L EL + G+ + A L P Sbjct: 233 -----AETRSRG------------TRARRSPHALDPKELPWLSQLGRNLTELAAAGRLDP 275 Query: 302 ALARGELHCVGATTLDEYRQYIEKDAALERRFQ-KVFVAEPSVEDTIAILRGLKERYELH 360 + R E + I D +RR + V EP V T AI+ G+ +R Sbjct: 276 LVGR----------EQEVEEAI--DVLGKRRTNNPLLVGEPGVGKT-AIVEGIAQRLLQS 322 Query: 361 HH----VQITDPAIVAAATL----SHRYIA----DRQLPDKAIDLIDEAASSIRMQIDSK 408 V+I ++VA +L S + + R+ + + IDE + + + Sbjct: 323 ARERVIVEIDMASVVAGTSLRGAFSEKLLGIQEEVRRAAGRVVVFIDEIHTLMGAGQAGE 382 Query: 409 PEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKAS 468 + + + + E + + + ++ ++ ER+++ + + + Sbjct: 383 GPQDAANELKAALGRGEFPCIGATTHDEYRQHIEKDPA----LERRFTPVLVREPSVADT 438 Query: 469 LSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLR 528 ++ + + E+ + A +S +K + A + R Sbjct: 439 VTILRGLAPRYEKHHRVRFADGALEAAASLSARYVTDRFLPDKAVSALDLAGSRASRAGA 498 Query: 529 NKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSR 588 +V A++A +A+ GIP SR++ S+RE++L +E L RV+G +A+ V+ ++R+ Sbjct: 499 AEVDAADVARTVAKMAGIPESRLLASDRERILGLEVALRDRVVGHADAIARVAAVLKRNF 558 Query: 589 AGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVG 648 AG A RP+GSFLFLGPTGVGKTEL +ALA+ ++ + +A+V++DMSE E V+RLVG Sbjct: 559 AGFA-TRRPMGSFLFLGPTGVGKTELARALADALYGAPDALVQLDMSECAETTGVARLVG 617 Query: 649 APPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVD 708 A PGYVGY EGG LT+AVRRRP SV++LDE+EKAH DV +LLQVL++GRLTDG+GR VD Sbjct: 618 AAPGYVGYGEGGQLTDAVRRRPASVVVLDEIEKAHRDVQMLLLQVLEEGRLTDGRGRQVD 677 Query: 709 FRNTVVIMTSNLGSDLIQERFGEL-------DYAHMKELVLGVVSHNFRPEFINRIDEVV 761 F N VV++TSNLG++ + VL PE NR+DE V Sbjct: 678 FSNAVVVLTSNLGAEEATRTSTGAMGFGAAERVQPRTDRVLQAARGAVPPELWNRLDERV 737 Query: 762 VFHPLGEQHIASIAQIQLKRLYKRLE-ERGYEIHISDEALKLLSEN-GYDPVYGARPLKR 819 F PL + +A +A++ + +RLE ER +D A+ L EN G+D GARP++ Sbjct: 738 CFSPLSREDVAKVARLLVAGSSRRLEAERRIRFEATDGAIAHLVENGGFDAALGARPMRG 797 Query: 820 AIQQQIENPLAQQILSGELVPGKVIRLEVN 849 AIQ+ +E PLA++IL+GEL PG V ++V+ Sbjct: 798 AIQRLVEAPLAERILAGELGPGDVAIVDVD 827 >UniRef50_UPI0001973947 ATP-dependent Clp protease, ATP-binding subunit ClpA n=3 Tax=Clostridiales RepID=UPI0001973947 Length = 801 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 147/345 (42%), Positives = 212/345 (61%), Gaps = 7/345 (2%) Query: 514 EAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQ 573 EA + + + V I E+L++ IP + E +KL +E+ L V GQ Sbjct: 445 EAGAYRKLHPLPQKKQTVGKEVIDEILSKTCRIPKKVVESGEIKKLAGLERRLSACVFGQ 504 Query: 574 NEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRID 633 +EA+ V NAI+ SRAGL++ +P+ SFLF+GPTGVGKTE+ ++LA+ + ++R D Sbjct: 505 DEAIKEVVNAIKFSRAGLSEAGKPLASFLFVGPTGVGKTEIARSLASEL---GIRLIRFD 561 Query: 634 MSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQV 693 MSE+ EKH+V++L+GAP GYVGYEEGG LTEAVR+ P++V+LLDE+EKAH D++NILLQV Sbjct: 562 MSEYEEKHAVAKLIGAPAGYVGYEEGGLLTEAVRKNPHAVLLLDEIEKAHSDIYNILLQV 621 Query: 694 LDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQER----FGELDYAHMKELVLGVVSHNF 749 +D LTD QGR DFRN V+IMTSN G+ + + +++ V+ F Sbjct: 622 MDYATLTDNQGRKADFRNIVLIMTSNAGASRLTKARLGFGDGAGADGRGSVIMDEVNRVF 681 Query: 750 RPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYD 809 +PEF NR+ +VVF + E+ IA +L+ L L ER E + +A LL++ G Sbjct: 682 QPEFRNRLSRIVVFDGIDERTAREIAGKKLRELGALLSERQVEFSFTRQAEALLTKKGVS 741 Query: 810 PVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIV 854 YGAR L R I+++I+ LA ++L G L G RL+V + V Sbjct: 742 REYGARELTRVIEREIKPLLADRLLFGSLKRGGFCRLDVKDGAFV 786 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 165/612 (26%), Positives = 276/612 (45%), Gaps = 84/612 (13%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M +D + + A A +++ P + + ++ G + G+L Sbjct: 2 MEID---EEVARVFSGAVKEAGERGLEYVTPELFLLKIADEP--MFREAFEECGGDCGEL 56 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLA------ 114 ++ + + + PS DL +L + Q G I + A Sbjct: 57 KSKLEAYIREQVPASDGKKEPVPSADLNELLFYTELTTQNCGKRSIDLNHLIAAYYHLEN 116 Query: 115 ------ALESRGTLADILKAAGATTANITQAIEQMRGGESVNDQ---------------- 152 +E A++L + E+ E ++ Sbjct: 117 SFALYYLMEQGIEKAELLLELIESGEKWEGEYEEYEVHEGGDNSEEWEEYYAREYELEKR 176 Query: 153 ---------------------------GAEDQRQALKKYTIDLTERAEQGKLDPVIGRDE 185 E +R+ + Y L + + P+IGR++ Sbjct: 177 REELMRGGGKRTEGKNDDGGEEDIPFGSTEKKREKWRDYVTCLNDSLSD--VSPLIGRED 234 Query: 186 EIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGAL 245 E+ RT+Q+L RR KNNP+ IGEPGVGKTAI GLA+ + +VPE LKG R+ +LD+GA+ Sbjct: 235 ELERTMQILCRREKNNPLHIGEPGVGKTAIAYGLARLLEEEKVPEALKGARIYSLDLGAM 294 Query: 246 VAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGK-ADGAMDAGNMLKPALA 304 +AG +YRGEFE+RLK VL L ++E ++ ++DE+H +VGAG +G+ DA N+LKP LA Sbjct: 295 IAGTQYRGEFEKRLKSVLAGLEREEKPIV-YLDEIHNIVGAGAVGEGSFDASNLLKPYLA 353 Query: 305 RGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQ 364 G + +GATT +EY+++ EK +L RRFQ + ++EP E+T+ IL GL++ YE +H V Sbjct: 354 AGRIRFIGATTHEEYKKHFEKSKSLVRRFQNIEISEPGEEETVKILEGLRKHYEKYHGVS 413 Query: 365 ITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKL 424 + A +S RYI +R LPDKAIDLIDEA + ++ + ++ + ++ Sbjct: 414 YKKGVMEYAVHMSARYINERFLPDKAIDLIDEAGAYRKLHPLPQKKQT-------VGKEV 466 Query: 425 EQQALMKESDEASKKRLDMLNEELSDKERQYSE-LEEEWKAEKASLSGTQTIKAELEQAK 483 + L K K ++L+ ER+ S + + +A K ++ + +A L +A Sbjct: 467 IDEILSKTCRIPKKVVESGEIKKLAGLERRLSACVFGQDEAIKEVVNAIKFSRAGLSEAG 526 Query: 484 IAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARW 543 + VG + K A + +RL+R +++ E +A+ Sbjct: 527 KPLASFLFVGPTG------------VGKTEIARSLASELGIRLIRFDMSEYEEKHAVAKL 574 Query: 544 TGIPVSRMMESE 555 G P + E Sbjct: 575 IGAPAGYVGYEE 586 >UniRef50_C5IFU1 Heat shock protein n=1 Tax=Eimeria tenella RepID=C5IFU1_EIMTE Length = 484 Score = 316 bits (809), Expect = 3e-84, Method: Composition-based stats. Identities = 132/348 (37%), Positives = 212/348 (60%), Gaps = 39/348 (11%) Query: 534 AEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLAD 593 ++A +L++WTGIP+ +M E E ++LR+ L RV+GQ+ AV AV++A+ RAGL+ Sbjct: 81 NDVAHILSQWTGIPMGKMTEDEVSRVLRLADILSLRVVGQDRAVKAVADALAIQRAGLSP 140 Query: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGY 653 N+P+G+FLFLG +GVGKTEL KA+A MFDS++ ++R+DM E+ E HS+SRL+G PPGY Sbjct: 141 KNKPLGTFLFLGSSGVGKTELAKAVAEEMFDSEKNLIRLDMVEYQEAHSISRLIGPPPGY 200 Query: 654 VGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTV 713 +G +EGG LTEAVR++P+SV+L DEVE AH +++++LL +LD+G L+D +G VDF N + Sbjct: 201 MGNDEGGQLTEAVRQKPHSVVLFDEVENAHKNLWSLLLPMLDEGHLSDSKGNRVDFTNCL 260 Query: 714 VIMTSNLGSDLIQERFGELDY--------------------------------------- 734 +I+TSN+G I + + E+ Sbjct: 261 IILTSNIGQQYILDSYKEVRALTAGNEKDKASSNGSSSSNGEEPGKSSFKGTGKSPKDIL 320 Query: 735 AHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIH 794 M++ VL V F+P+ I R+ E+++F PLGE + + ++L L L +G + Sbjct: 321 RRMRQKVLKEVFGYFKPQVIGRMSEIIIFEPLGETAMKGVLNLKLSALRNSLAAKGIDFK 380 Query: 795 ISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGK 842 ++D AL + E + +G R + + +++ I+ +A ++SG+L G Sbjct: 381 VADSALGYILERAWSHKFGGRRMAKYLEKYIKPRVAPLLISGKLKAGD 428 Score = 43.1 bits (100), Expect = 0.049, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 64/167 (38%) Query: 376 LSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDE 435 +S +Y+ R PDKA+DL+DE+ S R+ + K ++ ++ + KL ++ + + Sbjct: 1 MSDQYVKQRAFPDKALDLLDESCSWKRVSHNKKINVPNKQIAQLKKNKLPEEEEELKKLQ 60 Query: 436 ASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDL 495 L+ L + +++ G T ++A + RV Sbjct: 61 EELAALEALTAGGRRLVLETNDVAHILSQWTGIPMGKMTEDEVSRVLRLADILSLRVVGQ 120 Query: 496 ARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLAR 542 R + + L + G + L + V E+A+ +A Sbjct: 121 DRAVKAVADALAIQRAGLSPKNKPLGTFLFLGSSGVGKTELAKAVAE 167 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A1A3G2 Chaperone clpB n=4 Tax=Bacteria RepID=A1A3G2_BIFAA 847 0.0 UniRef50_C4FCQ4 Putative uncharacterized protein n=1 Tax=Bifidob... 846 0.0 UniRef50_Q6NF05 Chaperone protein clpB n=18 Tax=cellular organis... 841 0.0 UniRef50_P74459 Chaperone protein clpB 1 n=479 Tax=cellular orga... 841 0.0 UniRef50_D2NR34 ATPase with chaperone activity, ATP-binding subu... 835 0.0 UniRef50_Q9RVI3 Chaperone protein clpB n=9 Tax=Bacteria RepID=CL... 834 0.0 UniRef50_P42730 Heat shock protein 101 n=34 Tax=Eukaryota RepID=... 833 0.0 UniRef50_Q3L1D0 Heat shock protein 101 n=6 Tax=Eukaryota RepID=Q... 828 0.0 UniRef50_Q7UM33 Chaperone protein clpB n=21 Tax=Bacteria RepID=C... 827 0.0 UniRef50_Q73IE4 Chaperone protein clpB n=14 Tax=Rickettsiales Re... 817 0.0 UniRef50_Q7VQF3 Chaperone protein clpB n=10 Tax=Proteobacteria R... 813 0.0 UniRef50_Q7AJA9 Chaperone protein clpB n=4 Tax=Chlamydiales RepI... 812 0.0 UniRef50_Q6GIB2 Chaperone protein clpB n=1154 Tax=cellular organ... 799 0.0 UniRef50_C0GVK9 ATPase AAA-2 domain protein n=1 Tax=Desulfonatro... 794 0.0 UniRef50_C3XMZ6 ATP-dependent protease ATP-binding subunit n=4 T... 794 0.0 UniRef50_C9RKR5 ATPase AAA-2 domain protein n=1 Tax=Fibrobacter ... 792 0.0 UniRef50_Q4FXS7 Serine peptidase, putative n=12 Tax=cellular org... 789 0.0 UniRef50_Q822Q4 Chaperone protein clpB n=11 Tax=cellular organis... 789 0.0 UniRef50_D1B2U8 ATPase AAA-2 domain protein n=4 Tax=Bacteria Rep... 785 0.0 UniRef50_Q10YU4 ATPase AAA-2 n=7 Tax=Bacteria RepID=Q10YU4_TRIEI 783 0.0 UniRef50_B5Y5I5 Predicted protein n=4 Tax=cellular organisms Rep... 781 0.0 UniRef50_Q9ZMH1 Chaperone protein clpB n=85 Tax=Bacteria RepID=C... 768 0.0 UniRef50_D2VCN5 Heat shock protein 101 n=1 Tax=Naegleria gruberi... 760 0.0 UniRef50_B0EI70 Heat shock protein, putative n=1 Tax=Entamoeba d... 750 0.0 UniRef50_C3XDZ0 ATP-dependent protease ATP-binding subunit n=2 T... 746 0.0 UniRef50_Q8IB03 ClpB protein, putative n=13 Tax=cellular organis... 743 0.0 UniRef50_Q4L3I4 ATP-dependent Clp protease ATP-binding subunit c... 743 0.0 UniRef50_P31540 Heat shock protein hsp98 n=59 Tax=Dikarya RepID=... 741 0.0 UniRef50_P31541 ATP-dependent Clp protease ATP-binding subunit c... 741 0.0 UniRef50_Q4UAC3 ClpB protein, putative n=8 Tax=cellular organism... 741 0.0 UniRef50_P35100 ATP-dependent Clp protease ATP-binding subunit c... 739 0.0 UniRef50_C8NK17 ATP-dependent Clp protease ATP-binding subunit n... 738 0.0 UniRef50_B5HY88 Chaperone protein clpB n=1 Tax=Streptomyces svic... 737 0.0 UniRef50_A8B6K3 ClpB protein n=1 Tax=Giardia lamblia ATCC 50803 ... 735 0.0 UniRef50_Q47KW3 ATPase n=56 Tax=root RepID=Q47KW3_THEFY 731 0.0 UniRef50_D0D9L8 Chaperone protein ClpB n=1 Tax=Citreicella sp. S... 730 0.0 UniRef50_P33416 Heat shock protein 78, mitochondrial n=49 Tax=Di... 722 0.0 UniRef50_C8NYT7 ATP-dependent Clp protease ATP-binding subunit n... 720 0.0 UniRef50_Q4FY62 Serine peptidase, putative n=12 Tax=cellular org... 715 0.0 UniRef50_P31539 Heat shock protein 104 n=15 Tax=Eukaryota RepID=... 714 0.0 UniRef50_C4R0B7 Oligomeric mitochondrial matrix chaperone n=48 T... 713 0.0 UniRef50_Q8DTC7 Chaperone protein clpB n=2 Tax=Streptococcus mut... 709 0.0 UniRef50_O78410 ATP-dependent Clp protease ATP-binding subunit c... 705 0.0 UniRef50_P42762 ERD1 protein, chloroplastic n=22 Tax=cellular or... 702 0.0 UniRef50_B5Y8V8 Negative regulator of genetic competence ClpC/me... 700 0.0 UniRef50_Q7U3T3 Chaperone protein clpB 2 n=10 Tax=cellular organ... 700 0.0 UniRef50_B7VTU3 Chaperone ClpB n=1 Tax=Vibrio splendidus LGP32 R... 698 0.0 UniRef50_Q1WVA6 Negative regulator of genetic competence n=19 Ta... 695 0.0 UniRef50_A9FG71 ATPase with chaperone activity, two ATP-binding ... 692 0.0 UniRef50_A7JYI1 ATPases with chaperone activity, ATP-binding sub... 691 0.0 UniRef50_D2KTB1 BC18 (Fragment) n=1 Tax=Babesia caballi RepID=D2... 690 0.0 UniRef50_A6FFT5 Putative ATPase with chaperone activity n=1 Tax=... 689 0.0 UniRef50_D1HM97 Whole genome shotgun sequence of line PN40024, s... 687 0.0 UniRef50_C1EC57 ATP-dependent clp protease n=2 Tax=Micromonas Re... 686 0.0 UniRef50_Q83FI1 Chaperone protein clpB n=13 Tax=Bacteria RepID=C... 682 0.0 UniRef50_Q9I742 Protein clpV1 n=17 Tax=Proteobacteria RepID=CLPV... 674 0.0 UniRef50_A6FZR3 ATP-dependent chaperone protein ClpB n=3 Tax=Pro... 674 0.0 UniRef50_C2D9C6 ATPase with chaperone activity, ATP-binding subu... 674 0.0 UniRef50_B6EJJ8 Chaperone ClpB-1 n=12 Tax=Proteobacteria RepID=B... 674 0.0 UniRef50_C9XYK6 Chaperone protein clpB n=1 Tax=Cronobacter turic... 672 0.0 UniRef50_C6HYE9 ATPase AAA-2 domain protein n=1 Tax=Leptospirill... 671 0.0 UniRef50_Q2S2Z0 ATP-dependent Clp protease, ATPase subunit n=63 ... 671 0.0 UniRef50_Q21KI1 ATPase AAA-2 n=7 Tax=Gammaproteobacteria RepID=Q... 671 0.0 UniRef50_B7FUC8 Predicted protein n=1 Tax=Phaeodactylum tricornu... 670 0.0 UniRef50_Q2SEG4 ATPase with chaperone activity, ATP-binding subu... 668 0.0 UniRef50_Q046D3 ATP-binding subunit of Clp protease and DnaK/Dna... 667 0.0 UniRef50_A7APH1 Clp amino terminal domain containing protein n=1... 667 0.0 UniRef50_A8I1M5 ClpD chaperone, Hsp100 family n=1 Tax=Chlamydomo... 667 0.0 UniRef50_Q2T6Y8 ATP-dependent Clp protease, ATP-binding subunit ... 666 0.0 UniRef50_Q46HG6 ATPase n=17 Tax=Cyanobacteria RepID=Q46HG6_PROMT 666 0.0 UniRef50_C9RMJ0 ATPase AAA-2 domain protein n=1 Tax=Fibrobacter ... 666 0.0 UniRef50_Q9PKA8 Probable ATP-dependent Clp protease ATP-binding ... 664 0.0 UniRef50_B8L5D3 Type VI secretion ATPase, ClpV1 family n=1 Tax=S... 663 0.0 UniRef50_D2QZM9 Type VI secretion ATPase, ClpV1 family n=6 Tax=B... 663 0.0 UniRef50_Q9F746 Chaperone protein clpB n=100 Tax=Proteobacteria ... 662 0.0 UniRef50_A6VUK5 ATPase AAA-2 domain protein n=64 Tax=Gammaproteo... 660 0.0 UniRef50_B3L4X1 Heat shock protein 101, putative n=8 Tax=Plasmod... 659 0.0 UniRef50_A8Q6N1 Putative uncharacterized protein n=1 Tax=Malasse... 658 0.0 UniRef50_B0SCX5 Endopeptidase Clp, ATP-dependent proteolytic sub... 657 0.0 UniRef50_B7LFQ0 Putative uncharacterized protein n=1 Tax=Escheri... 657 0.0 UniRef50_B6R3N5 Type VI secretion ATPase, ClpV1 family n=4 Tax=P... 656 0.0 UniRef50_Q1N528 ATPase with chaperone activity, ATP-binding subu... 656 0.0 UniRef50_Q6KHS7 ATP-dependent Clp protease, ATPase subunit n=3 T... 656 0.0 UniRef50_D1TDQ5 Type VI secretion ATPase n=1 Tax=Burkholderia sp... 655 0.0 UniRef50_C6HIF6 Heat shock protein n=1 Tax=Ajellomyces capsulatu... 655 0.0 UniRef50_B8EIH7 Type VI secretion ATPase, ClpV1 family n=56 Tax=... 655 0.0 UniRef50_A5WFU1 ATP-dependent Clp protease ATP-binding subunit C... 653 0.0 UniRef50_Q030Z1 ATP-binding subunit of Clp protease and DnaK/Dna... 653 0.0 UniRef50_B7H4I2 Type VI secretion ATPase, ClpV1 family n=26 Tax=... 651 0.0 UniRef50_C5NWX3 Negative regulator of genetic competence ClpC/Me... 651 0.0 UniRef50_C1MLM7 Predicted protein n=1 Tax=Micromonas pusilla CCM... 650 0.0 UniRef50_C5ALE8 ATPases with chaperone activity, ATP-binding sub... 649 0.0 UniRef50_Q54316 Hemolysin B n=25 Tax=cellular organisms RepID=HL... 649 0.0 UniRef50_Q7NAZ3 Chaperone protein clpB n=5 Tax=Mollicutes RepID=... 649 0.0 UniRef50_Q8SQU0 HSP 101 RELATED PROTEIN n=2 Tax=Apansporoblastin... 647 0.0 UniRef50_Q98IM7 Probable ClpA/B-type protease n=6 Tax=Rhizobiale... 646 0.0 UniRef50_B5ZBN7 Chaperone protein ClpB n=44 Tax=cellular organis... 645 0.0 UniRef50_Q8EW28 Chaperone protein clpB n=2 Tax=Bacteria RepID=CL... 644 0.0 UniRef50_A7ZQR5 ClpA/ClpB family protein n=21 Tax=Proteobacteria... 643 0.0 UniRef50_C7RFB8 ATPase AAA-2 domain protein n=5 Tax=Clostridiale... 642 0.0 UniRef50_A4E9C6 Putative uncharacterized protein n=3 Tax=Collins... 641 0.0 UniRef50_D2TPV1 T6SS protein Cts2V n=1 Tax=Citrobacter rodentium... 641 0.0 UniRef50_Q7N4N8 Similar to ClpA/B-type chaperone n=3 Tax=Enterob... 640 0.0 UniRef50_A9BLL0 Type VI secretion ATPase, ClpV1 family n=46 Tax=... 639 0.0 UniRef50_D1J7B8 ATP-dependent Clp protease ATP-binding subunit c... 638 0.0 UniRef50_A4RQJ1 Chaperone, Hsp100 family, ClpB-type n=2 Tax=Ostr... 638 0.0 UniRef50_A6V7C9 Type VI secretion ATPase, ClpV1 family n=10 Tax=... 637 0.0 UniRef50_B3XE87 Type VI secretion ATPase, ClpV1 family n=1 Tax=E... 637 0.0 UniRef50_C7RF24 ATPase AAA-2 domain protein n=1 Tax=Anaerococcus... 637 0.0 UniRef50_A6EIG8 Putative ATP-dependent protease n=1 Tax=Pedobact... 637 0.0 UniRef50_Q88IA4 Chaperone-associated ATPase, putative n=14 Tax=G... 634 e-180 UniRef50_D2QJP1 ATPase AAA-2 domain protein n=12 Tax=Bacteria Re... 634 e-180 UniRef50_Q3LW37 ATP binding subunit of Clp protease n=1 Tax=Bige... 633 e-179 UniRef50_B2RGN2 ATP-dependent Clp protease ATP-binding subunit C... 633 e-179 UniRef50_A9FKV2 Endopeptidase Clp n=6 Tax=Proteobacteria RepID=A... 628 e-178 UniRef50_B5FRR8 Chaperone protein clpB n=19 Tax=Gammaproteobacte... 628 e-178 UniRef50_B5FD85 Type VI secretion ATPase, ClpV1 family n=2 Tax=V... 627 e-178 UniRef50_A1STR4 Chaperone endopeptidase Clp ATP-binding chain B,... 626 e-177 UniRef50_A6NVT1 Putative uncharacterized protein n=1 Tax=Bactero... 626 e-177 UniRef50_Q6TKU1 Aec27 n=39 Tax=cellular organisms RepID=Q6TKU1_E... 622 e-176 UniRef50_Q4AAM9 ATP-dependent protease binding protein n=7 Tax=M... 621 e-176 UniRef50_A0K1M3 ATPase AAA-2 domain protein n=6 Tax=Bacteria Rep... 621 e-176 UniRef50_C4GNT2 ClpB protein n=23 Tax=Yersinia RepID=C4GNT2_YERPN 618 e-175 UniRef50_B6EJ73 Chaperone ClpB n=1 Tax=Aliivibrio salmonicida LF... 618 e-175 UniRef50_C5ZYU5 ATP-dependent Clp protease subunit n=2 Tax=Prote... 618 e-175 UniRef50_C1SG60 ATPase with chaperone activity, ATP-binding subu... 616 e-174 UniRef50_D1PA52 Negative regulator of genetic competence n=1 Tax... 614 e-174 UniRef50_Q7CUP5 ATP-dependent Clp protease, ATP-binding subunit ... 614 e-174 UniRef50_C4I651 Type VI secretion ATPase, ClpV1 family n=52 Tax=... 614 e-174 UniRef50_Q3JGS2 ATP-dependent Clp protease ATP-binding subunit n... 608 e-172 UniRef50_B9K2G7 ATP-dependent Clp protease ATP-binding subunit n... 607 e-172 UniRef50_C1GY73 Chaperone protein clpB n=1 Tax=Paracoccidioides ... 606 e-171 UniRef50_P37571 Negative regulator of genetic competence clpC/me... 601 e-170 UniRef50_C9M6K4 Negative regulator of genetic competence ClpC/Me... 601 e-170 UniRef50_C7H8Y8 Clp protease, ATP-binding subunit ClpC n=3 Tax=C... 600 e-170 UniRef50_C2BFB3 ATP-binding ClpB chaperone n=1 Tax=Anaerococcus ... 596 e-168 UniRef50_A6G683 Probable ATP-dependent Clp protease n=1 Tax=Ples... 595 e-168 UniRef50_B8NZA1 Predicted protein (Fragment) n=1 Tax=Postia plac... 594 e-168 UniRef50_D1ZN19 Whole genome shotgun sequence assembly, scaffold... 593 e-167 UniRef50_A3DC71 ATPase AAA-2 n=13 Tax=Clostridiales RepID=A3DC71... 592 e-167 UniRef50_C7PG59 ATPase AAA-2 domain protein n=1 Tax=Chitinophaga... 588 e-166 UniRef50_Q53N47 ATP-dependent Clp protease ATP-binding subunit c... 588 e-166 UniRef50_D1Y1U8 Chaperone protein ClpB 1 n=1 Tax=Pyramidobacter ... 582 e-164 UniRef50_Q3JL54 ATP-dependent Clp protease, ATP-binding subunit ... 581 e-164 UniRef50_C9SIE3 Heat shock protein n=1 Tax=Verticillium albo-atr... 577 e-163 UniRef50_B0MPJ8 Putative uncharacterized protein n=1 Tax=Eubacte... 571 e-161 UniRef50_Q9KAV7 ATP-dependent proteinase n=3 Tax=Bacillus RepID=... 570 e-161 UniRef50_C7PZ63 ATPase AAA-2 domain protein n=7 Tax=Actinomyceta... 567 e-160 UniRef50_C9KP02 Negative regulator of genetic competence ClpC/Me... 566 e-159 UniRef50_C2MCW4 ATP-dependent Clp protease, ATP-binding subunit ... 566 e-159 UniRef50_A8MFR5 ATPase AAA-2 domain protein n=3 Tax=Clostridiale... 562 e-158 UniRef50_A6X7G2 ATPase AAA-2 domain protein n=64 Tax=cellular or... 557 e-157 UniRef50_A5IMI3 ATPase AAA-2 domain protein n=8 Tax=Thermotogace... 556 e-156 UniRef50_UPI000185C840 putative chaperone protein n=1 Tax=Capnoc... 556 e-156 UniRef50_A8JF08 ClpB chaperone, Hsp100 family (Fragment) n=1 Tax... 549 e-154 UniRef50_A4FF35 Clp protease ATP binding subunit n=7 Tax=Bacteri... 546 e-153 UniRef50_A5FES3 ATPase AAA-2 domain protein n=1 Tax=Flavobacteri... 544 e-153 UniRef50_Q025Q2 ATPase AAA-2 domain protein n=12 Tax=Bacteria Re... 542 e-152 UniRef50_A9BF41 ATPase AAA-2 domain protein n=14 Tax=cellular or... 539 e-151 UniRef50_D1QW31 Chaperone protein ClpB n=1 Tax=Prevotella oris F... 529 e-148 UniRef50_C4RIQ4 ATPase n=1 Tax=Micromonospora sp. ATCC 39149 Rep... 528 e-148 UniRef50_B6KUA3 ClpB protein, putative n=3 Tax=Toxoplasma gondii... 528 e-148 UniRef50_C4V0P0 ATPase with chaperone activity, ATP-binding subu... 527 e-148 UniRef50_C7HWH6 Negative regulator of genetic competence MecB/cl... 526 e-147 UniRef50_B2S3E1 ATP-dependent Clp protease, subunit C n=4 Tax=Tr... 525 e-147 UniRef50_Q64SE5 ATP-dependent Clp protease ATP-binding subunit n... 520 e-146 UniRef50_C9MS36 ClpB protein n=1 Tax=Prevotella veroralis F0319 ... 513 e-143 UniRef50_C9LKK9 Negative regulator of genetic competence ClpC/Me... 513 e-143 UniRef50_A5K1F9 ATP-dependent Clp protease, putative n=1 Tax=Pla... 499 e-139 UniRef50_B6KIW5 Heat shock protein, putative n=3 Tax=Toxoplasma ... 497 e-139 UniRef50_A8YTL4 ATP-dependent protease n=26 Tax=Lactobacillus Re... 497 e-138 UniRef50_C5NWU6 Negative regulator of genetic competence ClpC/Me... 485 e-135 UniRef50_B3LAU4 ATP-dependent Clp protease, putative n=1 Tax=Pla... 484 e-135 UniRef50_Q9S5Z2 ATP-dependent Clp protease ATP-binding subunit c... 479 e-133 UniRef50_C4W7H5 ATPase AAA-2 domain protein n=1 Tax=Staphylococc... 478 e-133 UniRef50_C5WHX6 ATP-dependent endopeptidase clp ATP-binding subu... 476 e-132 UniRef50_Q4U8P5 Endopeptidase (CLP homologue) ATP-binding chain,... 475 e-132 UniRef50_UPI0001C37703 ATPase AAA-2 domain protein n=1 Tax=Rumin... 470 e-131 UniRef50_A8I996 ClpB chaperone, Hsp100 family (Fragment) n=1 Tax... 466 e-129 UniRef50_Q8IM28 ATP-dependent CLP protease, putative n=6 Tax=cel... 466 e-129 UniRef50_Q6GDQ0 ATP-dependent Clp protease ATP-binding subunit c... 461 e-128 UniRef50_B0MVC3 Putative uncharacterized protein n=3 Tax=Bactero... 455 e-126 UniRef50_UPI0001C3229B ATPase AAA-2 domain protein n=1 Tax=Conex... 450 e-125 UniRef50_B6AFU4 Chaperone clpB family protein n=1 Tax=Cryptospor... 440 e-121 UniRef50_Q93ZM4 AT3g48870/T21J18_140 n=31 Tax=cellular organisms... 434 e-120 UniRef50_B0JIB9 ATP-dependent Clp protease ATPase subunit n=11 T... 434 e-120 UniRef50_A4W448 ATPases with chaperone activity, ATP-binding sub... 429 e-118 UniRef50_Q1IZ22 ATPase AAA-2 n=8 Tax=Deinococci RepID=Q1IZ22_DEIGD 421 e-116 UniRef50_Q8KA87 Probable chaperone protein clpB 2 n=15 Tax=cellu... 417 e-115 UniRef50_A3CMZ1 ATPases with chaperone activity, ATP-binding sub... 416 e-114 UniRef50_A0RNV1 ATP-dependent Clp protease ATP-binding subunit C... 414 e-114 UniRef50_D1Y107 Negative regulator of genetic competence ClpC/Me... 411 e-113 UniRef50_D2VM27 Predicted protein n=1 Tax=Naegleria gruberi RepI... 409 e-112 UniRef50_B3EPU4 ATPase AAA-2 domain protein n=4 Tax=Chlorobiacea... 409 e-112 UniRef50_UPI000194EB59 PREDICTED: hypothetical protein, partial ... 406 e-111 UniRef50_B3QUJ2 ATPase AAA-2 domain protein n=1 Tax=Chloroherpet... 404 e-110 UniRef50_A7AW26 Chaperone clpB, putative n=1 Tax=Babesia bovis R... 402 e-110 UniRef50_Q7RAR9 ATP-dependent Clp protease, ATPase subunit-relat... 396 e-108 UniRef50_A7HJU2 ATPase AAA-2 domain protein n=4 Tax=Thermotogace... 393 e-107 UniRef50_A6Q1Y5 ATP-dependent Clp protease, ATP-binding subunit ... 390 e-106 UniRef50_Q7XL03 OJ000315_02.14 protein n=2 Tax=Oryza sativa Japo... 390 e-106 UniRef50_C1ASB5 Putative ATP-dependent Clp protease ATP-binding ... 388 e-106 UniRef50_A8SAZ3 Putative uncharacterized protein n=1 Tax=Faecali... 388 e-106 UniRef50_C7H753 ATP-dependent Clp protease, ATP-binding subunit ... 386 e-105 UniRef50_A9AYE5 ATPase AAA-2 domain protein n=1 Tax=Herpetosipho... 385 e-105 UniRef50_C3KS27 Chaperone ClpB n=2 Tax=Clostridium botulinum Rep... 384 e-105 UniRef50_UPI000198575F PREDICTED: hypothetical protein n=1 Tax=V... 384 e-105 UniRef50_Q6ETV8 Putative uncharacterized protein n=4 Tax=Poaceae... 383 e-104 UniRef50_A4FG52 Clp protease ATP binding subunit n=1 Tax=Sacchar... 381 e-104 UniRef50_A7HAC7 ATPase AAA-2 domain protein n=6 Tax=Cystobacteri... 379 e-103 UniRef50_B8BXC6 Member of the clp superfamily, regulatory gamma ... 377 e-102 UniRef50_B8J0Q4 ATP-dependent Clp protease, ATP-binding subunit ... 373 e-101 UniRef50_Q0E0M6 Os02g0537400 protein n=2 Tax=Poaceae RepID=Q0E0M... 371 e-101 UniRef50_A6QBZ7 ATP-dependent Clp protease, ATP-binding subunit ... 371 e-101 UniRef50_A4S065 Chaperone, Hsp100 family, ClpC-type n=4 Tax=Mami... 370 e-100 UniRef50_UPI0001C372BC ATPase n=1 Tax=Ruminococcus flavefaciens ... 369 e-100 UniRef50_A3K6L5 ATP-dependent Clp protease, ATP-binding subunit ... 367 1e-99 UniRef50_A8EW19 ATP-dependent Clp protease, ATP-binding subunit ... 367 1e-99 UniRef50_C5YMW4 Putative uncharacterized protein Sb07g002440 n=1... 366 2e-99 UniRef50_Q73KU3 ATP-dependent Clp protease, ATP-binding subunit ... 365 5e-99 UniRef50_B9H7W9 Predicted protein n=3 Tax=rosids RepID=B9H7W9_POPTR 365 5e-99 UniRef50_Q2GGQ4 ATP-dependent Clp protease, ATP-binding subunit ... 362 4e-98 UniRef50_B8BRH2 Member of the clp superfamily, regulatory gamma ... 361 6e-98 UniRef50_A5MZQ1 ClpA n=7 Tax=Clostridium RepID=A5MZQ1_CLOK5 361 6e-98 UniRef50_P05444 ClpA homolog protein n=766 Tax=cellular organism... 360 2e-97 UniRef50_C6V4H7 ATP-dependent Clp protease, ATP-binding subunit ... 359 3e-97 UniRef50_A3DES0 ATP-dependent Clp protease ATP-binding subunit C... 359 4e-97 UniRef50_C9PUC6 ATP-dependent Clp protease subunit n=1 Tax=Prevo... 358 6e-97 UniRef50_B7GCV2 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 357 7e-97 UniRef50_A6KY28 ATP-dependent Clp protease, ATP-binding subunit ... 356 2e-96 UniRef50_B3ERL7 Putative uncharacterized protein n=1 Tax=Candida... 354 6e-96 UniRef50_C5ZY74 ATP-dependent Clp protease, ATP-binding subunit ... 354 6e-96 UniRef50_C5LIJ2 ATP-dependent Clp protease, putative n=3 Tax=Per... 351 9e-95 UniRef50_C8PIY8 ATP-dependent CLP protease ATP-binding subunit n... 348 5e-94 UniRef50_C4YJT6 Heat shock protein 78, mitochondrial n=1 Tax=Can... 346 2e-93 UniRef50_C3XML9 Endopeptidase subunit Clp ATP-binding A n=1 Tax=... 342 3e-92 UniRef50_D1AUG7 ATP-dependent clp protease ATP-binding subunit n... 339 4e-91 UniRef50_C3XFH5 ATP-dependent Clp protease ClpB n=1 Tax=Helicoba... 336 3e-90 UniRef50_B1GUR2 ATP-dependent Clp protease-like protein n=1 Tax=... 333 2e-89 UniRef50_Q9ZN31 ATP-DEPENDENT PROTEASE,ATP-BINDING SUBUNIT n=17 ... 331 1e-88 UniRef50_B2S440 ATP-dependent Clp protease, subunit A n=2 Tax=Tr... 329 3e-88 UniRef50_A5UYN2 ATPase AAA-2 domain protein n=1 Tax=Roseiflexus ... 326 3e-87 UniRef50_D1PH53 ATP-dependent Clp protease, ATP-binding subunit ... 322 3e-86 UniRef50_A3A5U3 Putative uncharacterized protein n=2 Tax=Oryza s... 320 2e-85 UniRef50_A7H2P9 ATP-dependent Clp protease, ATP-binding subunit ... 319 3e-85 UniRef50_UPI0001973947 ATP-dependent Clp protease, ATP-binding s... 318 7e-85 UniRef50_A9FU98 Endopeptidase ATPase with chaperone activity,two... 315 4e-84 UniRef50_D1Z247 ATP-dependent Clp protease ATP-binding subunit C... 315 6e-84 UniRef50_A7I2C9 ATP-dependent CLP protease ATP-binding subunit n... 311 8e-83 UniRef50_A6G5U6 AAA ATPase n=1 Tax=Plesiocystis pacifica SIR-1 R... 308 5e-82 Sequences not found previously or not previously below threshold: >UniRef50_A1A3G2 Chaperone clpB n=4 Tax=Bacteria RepID=A1A3G2_BIFAA Length = 905 Score = 847 bits (2188), Expect = 0.0, Method: Composition-based stats. Identities = 454/875 (51%), Positives = 620/875 (70%), Gaps = 27/875 (3%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 + T Q AL+DA A N ++ LHL+ A+L QE L+ +AG NA + Sbjct: 1 MEQKFTQMAQEALSDAVQNAAALGNPQVDTLHLLDAMLRQENSMARALIEAAGGNAQNVS 60 Query: 62 TDINQALNRLPQVEGTGG-DVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALE-SR 119 +++QA+ LP G+ S+ L VL+ +K Q+RGD +++ +L ++A Sbjct: 61 AEVHQAMQSLPSASGSTTTQPDVSRQLSAVLSQAEKEMQRRGDEYVTVDLMLVAIAAAKP 120 Query: 120 GTLADILKAAGATTANITQAIEQMRGGES-VNDQGAEDQRQALKKYTIDLTERAEQGKLD 178 ADIL+ G T + A+ RG + V AE +AL+KY+ DLT A++GKLD Sbjct: 121 NQSADILEKNGLTADKLRNALTAARGSDRKVTSADAEGSYKALEKYSTDLTAAAKEGKLD 180 Query: 179 PVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVL 238 PVIGRD+EIRR IQ+L RRTKNNPVLIGEPGVGKTA+VEGLAQRI+ G+VP L+ ++++ Sbjct: 181 PVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQNKKLI 240 Query: 239 ALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNM 298 +LD+G++VAG+KYRGEFEERLK VL ++ K +G +I FIDE+HT+VGAG A+G+MDAGNM Sbjct: 241 SLDLGSMVAGSKYRGEFEERLKSVLEEIKKADGQIITFIDEIHTIVGAGAAEGSMDAGNM 300 Query: 299 LKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYE 358 LKP LARGEL +GATTLDEYR+ IEKD ALERRFQ+VFV EPSVEDT+AILRG+ +YE Sbjct: 301 LKPMLARGELRLIGATTLDEYRENIEKDPALERRFQQVFVGEPSVEDTVAILRGIAPKYE 360 Query: 359 LHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418 HH V I D A+VAAATLS+RYI+ RQLPDKAIDL+DEAA+ +RM++DS PEE+D L R+ Sbjct: 361 AHHKVTIGDDALVAAATLSNRYISGRQLPDKAIDLVDEAAAHLRMELDSSPEEIDELRRQ 420 Query: 419 IIQLKLEQQAL-------------MKESDEASKKRLDMLNEELSDKERQYSELEEEWKAE 465 + +LK+E+ L E D+++K RL LN+E++DK + + L+ W AE Sbjct: 421 VDRLKMEKSYLLGNPKNDKATEKAEAELDDSAKDRLADLNQEIADKSEKLNGLKARWDAE 480 Query: 466 KASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKT-- 523 K + ++ +L++ + E+ R GDLA+ S + YG+IP ++K++ A + E ++ Sbjct: 481 KNGHNRIGDLRKKLDELRTQAEKYEREGDLAKSSAINYGEIPAIQKEIAQAEKNEAESGG 540 Query: 524 -------MRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEA 576 + ++ ++V IAE+++ WTGIPV R+M+ E EKLL ME+ L RVIGQ EA Sbjct: 541 ADNANADVPMVPDRVDADSIAEIVSDWTGIPVGRLMQGENEKLLHMEEYLGKRVIGQKEA 600 Query: 577 VDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSE 636 + AVS+A+RRSRAG++DPNRP GSFLFLGPTGVGKTEL KALA+F+FD ++AMVRIDMSE Sbjct: 601 IQAVSDAVRRSRAGISDPNRPTGSFLFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSE 660 Query: 637 FMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDD 696 +MEK SVSRL+GA PGY+GYEEGG LTEAVRRRPYSV+L DEVEKA+P+VF++LLQVLDD Sbjct: 661 YMEKASVSRLIGAAPGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKANPEVFDVLLQVLDD 720 Query: 697 GRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINR 756 GRLTDGQGRTVDF+NT++IMTSNLGS + ++D K+ V+ V F+PEFINR Sbjct: 721 GRLTDGQGRTVDFKNTILIMTSNLGSQFLVN--PDMDADAKKKAVMDAVHMQFKPEFINR 778 Query: 757 IDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARP 816 +DE+V+FHPL + + I IQ+ ++ RL +R + ++D A + L+ GYDP YGARP Sbjct: 779 LDELVMFHPLTREELGGIVDIQVAQVSARLTDRRITLDVTDSAREWLANTGYDPAYGARP 838 Query: 817 LKRAIQQQIENPLAQQILSGELVPGKVIRLEVNED 851 L+R +Q ++ + LA+ +L+GE+ G + ++ Sbjct: 839 LRRLVQTEVGDQLARMLLAGEVHDGDTVLVDQTGG 873 >UniRef50_C4FCQ4 Putative uncharacterized protein n=1 Tax=Bifidobacterium angulatum DSM 20098 RepID=C4FCQ4_9BIFI Length = 910 Score = 846 bits (2185), Expect = 0.0, Method: Composition-based stats. Identities = 454/880 (51%), Positives = 619/880 (70%), Gaps = 30/880 (3%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M ++LTN + A+ DA A N I+ LHL++ALL QE G V L+ +AG +A + Sbjct: 1 MDQNKLTNMSREAITDAVQSASAAGNAQIDVLHLLNALLTQEQGVVRGLIEAAGGDAKAI 60 Query: 61 RTDINQALNRLPQVEGTGG-DVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESR 119 T + AL LP G+ QPS+ L +K Q+ GD +IS+E ++ + Sbjct: 61 GTAVRNALTNLPSASGSTTAQPQPSRQFEAALVQSEKEMQQMGDEYISTEHLLIGIAAAA 120 Query: 120 GTLA-DILKAAGATTANITQAIEQMRGGES-VNDQGAEDQRQALKKYTIDLTERAEQGKL 177 A DIL+A T + A+ +RGG+ V AE +AL+KY+ DLT A++GKL Sbjct: 121 PNQAADILQANNVTAQALRAAVPTVRGGDRKVTSPDAEGSYKALEKYSTDLTAAAKEGKL 180 Query: 178 DPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRV 237 DPVIGRD+EIRR IQ+L RRTKNNPVLIGEPGVGKTA+VEGLAQRI+ G+VP L+ +++ Sbjct: 181 DPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQNKKL 240 Query: 238 LALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGN 297 ++LD+G++VAG+KYRGEFEERLK VL ++ G +I FIDE+HT+VGAG A+G+MDAGN Sbjct: 241 ISLDLGSMVAGSKYRGEFEERLKSVLEEIKNANGQIITFIDEIHTIVGAGAAEGSMDAGN 300 Query: 298 MLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERY 357 MLKP LARGEL +GATTLDEYR+ IEKD ALERRFQ+VFV EPSVEDTIAILRG+ +Y Sbjct: 301 MLKPMLARGELRLIGATTLDEYRENIEKDPALERRFQQVFVGEPSVEDTIAILRGIAPKY 360 Query: 358 ELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDR 417 E HH V I D A+VAAATLS+RYI+ RQLPDKAIDL+DEAA+ +RM++DS PEE+D L R Sbjct: 361 EAHHKVTIGDDALVAAATLSNRYISGRQLPDKAIDLVDEAAAHLRMELDSSPEEIDELTR 420 Query: 418 RIIQLKLEQQAL-------------MKESDEASKKRLDMLNEELSDKERQYSELEEEWKA 464 ++ +LK+E+ L E D+++K RL LN+E+++K + + L+ W A Sbjct: 421 QVERLKMEKSYLLGNPKNDKAADKAEAELDDSAKDRLADLNKEIANKSEKLNGLKARWDA 480 Query: 465 EKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEG--- 521 EK+ + ++ +L++ + E+ R GDLA+ S + YG+IP ++K++ A + E Sbjct: 481 EKSGHNRIGDLRKKLDELRTQAERYEREGDLAKSSAINYGEIPNIQKEIAQAEKNEQNVK 540 Query: 522 ---------KTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIG 572 + ++ ++V +AE+++ WTGIPV R+M+ E EKLL ME L RVIG Sbjct: 541 NGSNAANTAADVPMVPDRVDADSVAEIVSDWTGIPVGRLMQGENEKLLTMEDYLGKRVIG 600 Query: 573 QNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRI 632 Q EA+ AVS+A+RRSRAG++DPNRP GSFLFLGPTGVGKTEL KALA+F+FD ++AMVRI Sbjct: 601 QKEAIKAVSDAVRRSRAGISDPNRPTGSFLFLGPTGVGKTELAKALADFLFDDEKAMVRI 660 Query: 633 DMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQ 692 DMSE+MEK SVSRL+GA PGYVGYE+GG LTEAVRRRPYSV+L DEVEKA+P++F++LLQ Sbjct: 661 DMSEYMEKASVSRLIGAAPGYVGYEQGGQLTEAVRRRPYSVVLFDEVEKANPEIFDVLLQ 720 Query: 693 VLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPE 752 VLDDGRLTDGQGRTVDF+NT++IMTSNLGS + ++D ++ V+ V NF+PE Sbjct: 721 VLDDGRLTDGQGRTVDFKNTILIMTSNLGSQFLVNE--DMDDEAKRKAVMDTVHMNFKPE 778 Query: 753 FINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVY 812 F+NR+D+ V+FHPL + + I IQ+ + RL +R + ++D A + L+ GYDP Y Sbjct: 779 FLNRLDDTVMFHPLTREELGGIVDIQVANVSARLTDRRITLDVTDSAREWLANVGYDPAY 838 Query: 813 GARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDR 852 GARPL+R +Q ++ + LA+ +L+G++ G + ++ Sbjct: 839 GARPLRRLVQTEVGDQLARMLLAGKVHDGDTVLVDQTGGE 878 >UniRef50_Q6NF05 Chaperone protein clpB n=18 Tax=cellular organisms RepID=CLPB_CORDI Length = 849 Score = 841 bits (2173), Expect = 0.0, Method: Composition-based stats. Identities = 480/853 (56%), Positives = 620/853 (72%), Gaps = 17/853 (1%) Query: 7 TNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQ 66 T K Q AL +A A N I P HL++A+L QE G P+L + G++ +R + Sbjct: 7 TTKTQEALQEALQKASAAGNPDIRPEHLLAAILGQEDGIAIPVLRATGVDPDVVRREAEA 66 Query: 67 ALNRLPQVEGTG-GDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADI 125 + +LP+ EG + ++D + VLN +LA + GD ++S+E+ + A A++ Sbjct: 67 LVAKLPKAEGANLANPNFNRDALSVLNNAQELAGELGDEYVSTEVLLAAVARGTNDAAEL 126 Query: 126 LKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDE 185 L GAT I +RG + V + EDQ QAL+KY+ DLT RA +GK+DPVIGRD+ Sbjct: 127 LTKRGATYDVIKGVFPSVRGNKKVTTESPEDQFQALEKYSTDLTARAREGKIDPVIGRDQ 186 Query: 186 EIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGAL 245 EIRR +QVL RRTKNNPVLIGEPGVGKTAIVEGLA+RI+ G+VPE LKG+ +++LD+G++ Sbjct: 187 EIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVAGDVPESLKGKTLISLDLGSM 246 Query: 246 VAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKA-DGAMDAGNMLKPALA 304 VAGAKYRGEFEERLK VL+++ EG +I FIDELHT+VGAG D AMDAGNM+KP LA Sbjct: 247 VAGAKYRGEFEERLKAVLDEIKSAEGEIITFIDELHTIVGAGATGDSAMDAGNMIKPLLA 306 Query: 305 RGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQ 364 RGEL VGATTLDEYR+YIEKDAALERRFQ+VFV EPSVED + ILRGLKERYE+HH V+ Sbjct: 307 RGELRLVGATTLDEYRKYIEKDAALERRFQQVFVGEPSVEDAVGILRGLKERYEVHHGVR 366 Query: 365 ITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKL 424 I D A+VAAATLS RYI R LPDKAIDL+DEAAS +RM+IDS P+E+D L+R + +L++ Sbjct: 367 IQDSALVAAATLSDRYITSRFLPDKAIDLVDEAASRLRMEIDSSPQEIDELERIVRRLEI 426 Query: 425 EQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKI 484 E+ AL KE+D ASK RL L +EL+D+ + EL W EK +++ + K ELE+ + Sbjct: 427 EEVALSKETDAASKDRLIKLRQELADEREKLGELVARWNNEKGAINKVREAKEELERLRS 486 Query: 485 AIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWT 544 E A R GD +++EL+YG+IPELEKQ+ A +L +VT IAEV++ WT Sbjct: 487 ESEIAERDGDYGKVAELRYGRIPELEKQVAEAE-EHTVETTMLSEEVTPDTIAEVVSAWT 545 Query: 545 GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFL 604 GIP +M++ E EKLL ME EL RV+GQ+EAV AVS+A+RR+RAG+ADPNRP GSFLFL Sbjct: 546 GIPAGKMLQGETEKLLNMEAELGKRVVGQSEAVVAVSDAVRRARAGVADPNRPTGSFLFL 605 Query: 605 GPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTE 664 GPTGVGKTEL KALA FMFD D AMVRIDMSE+ EKH+V+RLVGAPPGYVGY++GG LTE Sbjct: 606 GPTGVGKTELAKALAEFMFDDDRAMVRIDMSEYGEKHAVARLVGAPPGYVGYDQGGQLTE 665 Query: 665 AVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDL 724 AVRRRPY+V+L DEVEKAHPDVF+ILLQVLD+GRLTDGQGRTVDFRNTV+I+TSNLG+ Sbjct: 666 AVRRRPYTVVLFDEVEKAHPDVFDILLQVLDEGRLTDGQGRTVDFRNTVLILTSNLGAGG 725 Query: 725 IQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYK 784 K+ ++ V F+PEF+NR+D+VV+F PL ++ + I +IQ+ +L + Sbjct: 726 ------------TKDEMMDAVKRAFKPEFVNRLDDVVIFDPLSQEQLTHIVEIQIAQLAQ 773 Query: 785 RLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVI 844 RL R + +SD A L+E GY+P YGARPL+R IQQ I + LA+++LSGE+ G + Sbjct: 774 RLAARRLTLAVSDSAKLWLAERGYEPAYGARPLRRLIQQAIGDQLAKKLLSGEVRDGSEV 833 Query: 845 RLEV--NEDRIVA 855 ++ + D +V Sbjct: 834 HVDADLDNDGLVI 846 >UniRef50_P74459 Chaperone protein clpB 1 n=479 Tax=cellular organisms RepID=CLPB1_SYNY3 Length = 898 Score = 841 bits (2172), Expect = 0.0, Method: Composition-based stats. Identities = 463/868 (53%), Positives = 629/868 (72%), Gaps = 15/868 (1%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 + T + A+ +Q +A + N +E H++ ALL Q+ G + + A ++ LR Sbjct: 5 DPTKFTEQAWDAIVKSQEVARRYKNTNLEVEHILLALLEQDMGLAARIFQRAAVDGEGLR 64 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGT 121 + NR P+ + + L +L+ D D FIS E ++ E Sbjct: 65 QQLEIFTNRQPKQAYV-EQLYLGRSLDVMLDRADAARSSWEDKFISVEHLLVGFAEDDRV 123 Query: 122 LADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVI 181 L+A ++ AI+ +RG + V + E++ +AL KY DLTE+A QGKLDPVI Sbjct: 124 GRKTLRAFNLDPQDLELAIKAIRGSQKVTEPNQEEKYEALDKYGRDLTEQARQGKLDPVI 183 Query: 182 GRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALD 241 GRDEEIRR IQVL RR+KNNPVLIGEPGVGKTAI EGLAQRIING+VPE LK R++++LD Sbjct: 184 GRDEEIRRVIQVLSRRSKNNPVLIGEPGVGKTAIAEGLAQRIINGDVPESLKNRQLISLD 243 Query: 242 MGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGA--MDAGNML 299 MG+L+AGAKYRGEFEERL+ V+ ++ +G +ILFIDE+HT+VGAG +G+ MDAGN+L Sbjct: 244 MGSLIAGAKYRGEFEERLRSVMKEVTNSDGQIILFIDEVHTVVGAGGREGSGSMDAGNLL 303 Query: 300 KPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYEL 359 KP LARGEL C+GATTLDEYR+ IEKD ALERRFQ+V+V +PSV+DTI+ILRGLKE+YE+ Sbjct: 304 KPMLARGELRCIGATTLDEYRKNIEKDPALERRFQQVYVKQPSVDDTISILRGLKEKYEV 363 Query: 360 HHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRI 419 HH V+ITD A+VAAATLSHRYI DR LPDKAIDL+DEAA+ ++M+I SKP EL+ +DRR+ Sbjct: 364 HHGVKITDSALVAAATLSHRYIQDRFLPDKAIDLVDEAAARLKMEITSKPVELEDIDRRL 423 Query: 420 IQLKLEQQALMKES-------DEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGT 472 +QL++E+ +L E D++SK+RL+ + +E+++ E Q EL +W +EK L Sbjct: 424 MQLQMEKLSLEGEEKRPGLGADKSSKERLEKIQQEITELEGQQQELSGQWLSEKQMLEEI 483 Query: 473 QTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAAT----QLEGKTMRLLR 528 T+K + ++ ++ +E+A R D + ++++YG++ L+ +E +++G LLR Sbjct: 484 NTLKEKEQELRLQVEKAERATDWEKAAKIKYGELEVLQHDIEEKESKLLEIQGSGNTLLR 543 Query: 529 NKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSR 588 +VT+++IAE++A WTGIP++R+ME+ER+KLL++E LH RVIGQ EAV AVS AIRR+R Sbjct: 544 EQVTESDIAEIVAGWTGIPMNRLMETERQKLLQLEGHLHQRVIGQKEAVAAVSAAIRRAR 603 Query: 589 AGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVG 648 AG+ DP+RPIGSFLF+GPTGVGKTEL +ALA F+FDS+EAMVRIDMSE+MEKH+VSRL+G Sbjct: 604 AGMKDPSRPIGSFLFMGPTGVGKTELARALAGFLFDSEEAMVRIDMSEYMEKHAVSRLIG 663 Query: 649 APPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVD 708 APPGYVGYEEGG L+EAVRRRPYSV+LLDEVEKAH DVFNILLQVLDDGR+TD QGR VD Sbjct: 664 APPGYVGYEEGGQLSEAVRRRPYSVVLLDEVEKAHLDVFNILLQVLDDGRITDSQGRVVD 723 Query: 709 FRNTVVIMTSNLGSDLIQE-RFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLG 767 FRNT+++MTSN+GSD I + DY M++ VL + +FRPEF+NRID++++FH L Sbjct: 724 FRNTIIVMTSNIGSDHILSLSADDADYDKMQKQVLQSLRKHFRPEFLNRIDDLIIFHTLK 783 Query: 768 EQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIEN 827 + I +Q+KR+ K L+E+ + +SD AL + GYDP YGARPLKRAIQ+Q+EN Sbjct: 784 RDELRRIVVLQIKRIEKLLDEQKITLSLSDAALDHIVSAGYDPTYGARPLKRAIQRQLEN 843 Query: 828 PLAQQILSGELVPGKVIRLEVNEDRIVA 855 P+A +IL V G I ++ + +++ Sbjct: 844 PIATKILENTFVAGDKILIDCVDGQLIF 871 >UniRef50_D2NR34 ATPase with chaperone activity, ATP-binding subunit n=3 Tax=Actinobacteria (class) RepID=D2NR34_9MICC Length = 959 Score = 835 bits (2157), Expect = 0.0, Method: Composition-based stats. Identities = 466/853 (54%), Positives = 617/853 (72%), Gaps = 5/853 (0%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 ++ T K Q ++ A + A N IE H++ AL++Q G +L +AG++ + Sbjct: 91 MDNKFTTKSQEVISAANTNAQTAGNPTIETAHILKALMDQREGVAVAVLKAAGLDVDAIS 150 Query: 62 TDINQALNRLPQVEGTG-GDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG 120 + + +LP+ G + S+ + L AQ GD ++S+E+ +L Sbjct: 151 EAASAEIKKLPKASGASVQNASLSRAALSALQAAQTRAQGFGDTYVSTEMILLGIASGTD 210 Query: 121 TLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPV 180 + A + GAT I Q I +RG +V+ E QAL+KY DLT A GKLDPV Sbjct: 211 STATAMHKLGATAELIAQTIPNVRGDRTVDTPDPEGTFQALEKYGTDLTAIARAGKLDPV 270 Query: 181 IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL 240 IGRD EIRR +QVL RRTKNNPVLIGEPGVGKTA+VEGLAQR+++G+VPE L+G+ +++L Sbjct: 271 IGRDSEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRMVSGDVPESLRGKTLISL 330 Query: 241 DMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLK 300 D+G++VAGAKYRGEFEERLK VL ++ K EG ++ FIDE+HT+VGAG ++G+MDAGNMLK Sbjct: 331 DLGSMVAGAKYRGEFEERLKAVLEEIKKSEGQIVTFIDEIHTVVGAGASEGSMDAGNMLK 390 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELH 360 P LARGEL +GATTLDEYR+ IEKD ALERRFQ+V+V EPSV+DTI ILRGLKERYE H Sbjct: 391 PMLARGELRLIGATTLDEYRENIEKDPALERRFQQVYVGEPSVDDTIGILRGLKERYEAH 450 Query: 361 HHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRII 420 H VQI D A+VAAATLS+RYI RQLPDKAIDLIDEAAS +RM+IDS PEE+D+L R + Sbjct: 451 HKVQIADSALVAAATLSNRYIPSRQLPDKAIDLIDEAASRLRMEIDSAPEEIDQLRRAVD 510 Query: 421 QLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELE 480 +L +E+ AL E+D AS +RL+ L ++++DK+ Q L W+AEKASL+ IK +++ Sbjct: 511 RLTMEELALADETDPASVERLEALRKDMADKKEQLDALNARWEAEKASLNRVGDIKTQID 570 Query: 481 QAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE--GKTMRLLRNKVTDAEIAE 538 + + E A+R G+LA S L YG+IP + +LE A + E K ++ +VT +IAE Sbjct: 571 ELRSRAEVAQREGNLAEASRLLYGEIPAKQAELEEAQRAEDTAKNESMVSEEVTADDIAE 630 Query: 539 VLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPI 598 V++ WTGIP RMM+ E EKLL ME+ + R+IGQ AV AVS+A+RR+RAG++DPNRPI Sbjct: 631 VISSWTGIPAGRMMQGESEKLLEMEKRIGARLIGQEAAVVAVSDAVRRARAGISDPNRPI 690 Query: 599 GSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEE 658 GSFLFLGPTGVGKTEL KALA F FD + A+VRIDMSE+ EKH+VSRLVGAPPGYVG+EE Sbjct: 691 GSFLFLGPTGVGKTELAKALAEFQFDDERALVRIDMSEYSEKHTVSRLVGAPPGYVGHEE 750 Query: 659 GGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTS 718 GG LTEAVRRRPYSV+LLDEVEKAHP+VF+ILLQVLDDGRLTDGQGRTVDFRN ++I+TS Sbjct: 751 GGQLTEAVRRRPYSVVLLDEVEKAHPEVFDILLQVLDDGRLTDGQGRTVDFRNVILILTS 810 Query: 719 NLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQ 778 NLGS + +L + E L VV FRPEF+NR+D++++F PL +++ I +Q Sbjct: 811 NLGSQYLVN--QDLPFEERSEKALEVVHQAFRPEFLNRLDDIIMFQPLSAENLGQIVGLQ 868 Query: 779 LKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGEL 838 +K + KRLE+R +++++ AL+ L + GYDP +GARPL+R +Q++I + LA+ ILSG + Sbjct: 869 IKSMAKRLEDRRLTLNVTEAALEWLGKTGYDPAFGARPLRRLVQREIGDRLARGILSGAI 928 Query: 839 VPGKVIRLEVNED 851 G + ++VN D Sbjct: 929 HDGDTVTVDVNPD 941 >UniRef50_Q9RVI3 Chaperone protein clpB n=9 Tax=Bacteria RepID=CLPB_DEIRA Length = 852 Score = 834 bits (2153), Expect = 0.0, Method: Composition-based stats. Identities = 462/856 (53%), Positives = 628/856 (73%), Gaps = 11/856 (1%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M +R T +A+ AQ LA + NQ + H++ LL+ + S LT AG + Sbjct: 1 MNPERFTEASAVAINAAQQLAQENHNQNLTHFHVLRTLLDNDT--ASRALTLAGGDLNTA 58 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG 120 R ++ + +LP+V+G+ G + L R D LA + GD+F++++ +LA Sbjct: 59 RAALDAEIAKLPKVQGSDGQLYLDPALNRAFQKADTLAAQLGDSFVAADTLLLALRGE-- 116 Query: 121 TLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPV 180 ++ +A+ + R G++V ++ +E Q AL KY DLT+RA GK DPV Sbjct: 117 ----YRGRGLPDEVSLNRAVTEQRKGKTVTNKTSEQQFDALNKYGTDLTQRARDGKFDPV 172 Query: 181 IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL 240 IGRDEEIRR +Q+L RR+KNNPVLIGEPGVGKTAI EGLA RI+ G+VPEGL+ +++++L Sbjct: 173 IGRDEEIRRVMQILLRRSKNNPVLIGEPGVGKTAIAEGLAMRIVKGDVPEGLRDKKIVSL 232 Query: 241 DMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLK 300 +MG+L+AGAK+RGEFEERLKGV++++ K G +ILF+DE+HT+VGAGK +G+ DAGNMLK Sbjct: 233 EMGSLLAGAKFRGEFEERLKGVIDEVVKSAGEIILFVDEIHTIVGAGKTEGSPDAGNMLK 292 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELH 360 PALARGELH +GATTLDEYR+ IEKDAALERRFQ VFV EPSVEDTI+ILRG+KERY++H Sbjct: 293 PALARGELHLIGATTLDEYRE-IEKDAALERRFQPVFVDEPSVEDTISILRGIKERYQVH 351 Query: 361 HHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRII 420 H+V+ITDPA+VAAATLS+RYI DRQLPDKAIDLIDE+A+ +RM ++S PE +D+L RR + Sbjct: 352 HNVEITDPALVAAATLSNRYITDRQLPDKAIDLIDESAARLRMALESSPERIDQLSRRKL 411 Query: 421 QLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELE 480 QL++E++AL +E D S+ RL + +L + +E+ W+AE+ ++ + + +L+ Sbjct: 412 QLEIEREALKREKDVDSQNRLLDIENQLKTLTDELNEVRSRWEAERGEVAALREKREKLD 471 Query: 481 QAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVL 540 + IE+ARR DL + L+YG++P LEK ++ + + K+ +VT+ +IA V+ Sbjct: 472 AVRTQIEKARRDYDLEEAARLEYGELPALEKDVQDLEK-KLKSAEFAHMEVTEEDIAAVV 530 Query: 541 ARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGS 600 +RWTGIPVS++ME EREKLL +E++LH RVIGQ+ A+ +VS+AIRR+RAGL DPNRP+GS Sbjct: 531 SRWTGIPVSKLMEGEREKLLHLEEQLHGRVIGQDRAIVSVSDAIRRARAGLNDPNRPLGS 590 Query: 601 FLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG 660 F+FLGP+GVGKTEL KALA F+FDS +AMVRIDMSE+MEKH+V+RL+GAPPGYVG+EEGG Sbjct: 591 FMFLGPSGVGKTELAKALAEFLFDSSDAMVRIDMSEYMEKHTVARLIGAPPGYVGFEEGG 650 Query: 661 YLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL 720 LTEAVRRRPY+VIL DE+EKAHPDVFN+LLQVLDDGRLTDGQGRTVDFRNT++IMTSN+ Sbjct: 651 QLTEAVRRRPYAVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSNI 710 Query: 721 GSDLIQERFG-ELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQL 779 GS LI E D +K V+ + FRPEF+NR+D+++VF L + + SI IQL Sbjct: 711 GSPLILEMQQRGEDAETIKSAVMDELRGEFRPEFLNRVDDIIVFDALTAKDLQSIVDIQL 770 Query: 780 KRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELV 839 L +RL ER +H++++A L+E GYDP YGARPL+R I Q IE PLA++IL G++ Sbjct: 771 GGLRRRLAERRITLHLTEDAKDKLAELGYDPAYGARPLRRTISQYIETPLAREILGGQIQ 830 Query: 840 PGKVIRLEVNEDRIVA 855 G V+ ++ + Sbjct: 831 DGSVLNVDYGDGGFTF 846 >UniRef50_P42730 Heat shock protein 101 n=34 Tax=Eukaryota RepID=HS101_ARATH Length = 911 Score = 833 bits (2152), Expect = 0.0, Method: Composition-based stats. Identities = 436/860 (50%), Positives = 593/860 (68%), Gaps = 8/860 (0%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGIN--AG 58 M ++ T+K +A A LA+ + PLHL AL++ G ++SAG A Sbjct: 1 MNPEKFTHKTNETIATAHELAVNAGHAQFTPLHLAGALISDPTGIFPQAISSAGGENAAQ 60 Query: 59 QLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES 118 INQAL +LP D+ S L++V+ + RGD ++ + ++ L Sbjct: 61 SAERVINQALKKLPSQSPPPDDIPASSSLIKVIRRAQAAQKSRGDTHLAVDQLIMGLL-E 119 Query: 119 RGTLADILKAAGATTANITQAIEQMRG--GESVNDQGAEDQRQALKKYTIDLTERAEQGK 176 + D+L G TA + +E++RG G+ V + QALK Y DL E+A GK Sbjct: 120 DSQIRDLLNEVGVATARVKSEVEKLRGKEGKKVESASGDTNFQALKTYGRDLVEQA--GK 177 Query: 177 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRR 236 LDPVIGRDEEIRR +++L RRTKNNPVLIGEPGVGKTA+VEGLAQRI+ G+VP L R Sbjct: 178 LDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPNSLTDVR 237 Query: 237 VLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAG 296 +++LDMGALVAGAKYRGEFEERLK VL ++ EG VILFIDE+H ++GAGK +G+MDA Sbjct: 238 LISLDMGALVAGAKYRGEFEERLKSVLKEVEDAEGKVILFIDEIHLVLGAGKTEGSMDAA 297 Query: 297 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 356 N+ KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V+VAEPSV DTI+ILRGLKE+ Sbjct: 298 NLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTISILRGLKEK 357 Query: 357 YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 416 YE HH V+I D A++ AA LS RYI R LPDKAIDL+DEA +++R+Q+DS+PEE+D L+ Sbjct: 358 YEGHHGVRIQDRALINAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLE 417 Query: 417 RRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476 R+ +QL++E AL +E D+ASK RL + +EL D + L +++ EK + + +K Sbjct: 418 RKRMQLEIELHALEREKDKASKARLIEVRKELDDLRDKLQPLTMKYRKEKERIDEIRRLK 477 Query: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 536 + E+ ++++A R DLAR ++L+YG I E+E + + +L V I Sbjct: 478 QKREELMFSLQEAERRYDLARAADLRYGAIQEVESAIAQLEGTSSEENVMLTENVGPEHI 537 Query: 537 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNR 596 AEV++RWTGIPV+R+ ++E+E+L+ + LH RV+GQN+AV+AVS AI RSRAGL P + Sbjct: 538 AEVVSRWTGIPVTRLGQNEKERLIGLADRLHKRVVGQNQAVNAVSEAILRSRAGLGRPQQ 597 Query: 597 PIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGY 656 P GSFLFLGPTGVGKTEL KALA +FD + +VRIDMSE+ME+HSVSRL+GAPPGYVG+ Sbjct: 598 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGH 657 Query: 657 EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 716 EEGG LTEAVRRRPY VIL DEVEKAH VFN LLQVLDDGRLTDGQGRTVDFRN+V+IM Sbjct: 658 EEGGQLTEAVRRRPYCVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNSVIIM 717 Query: 717 TSNLGSDLIQER-FGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIA 775 TSNLG++ + G++ ++ V+ V +FRPE +NR+DE+VVF PL + +A Sbjct: 718 TSNLGAEHLLAGLTGKVTMEVARDCVMREVRKHFRPELLNRLDEIVVFDPLSHDQLRKVA 777 Query: 776 QIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILS 835 ++Q+K + RL ERG + ++D AL + YDPVYGARP++R +++++ L++ ++ Sbjct: 778 RLQMKDVAVRLAERGVALAVTDAALDYILAESYDPVYGARPIRRWMEKKVVTELSKMVVR 837 Query: 836 GELVPGKVIRLEVNEDRIVA 855 E+ + ++ +V Sbjct: 838 EEIDENSTVYIDAGAGDLVY 857 >UniRef50_Q3L1D0 Heat shock protein 101 n=6 Tax=Eukaryota RepID=Q3L1D0_VITVI Length = 911 Score = 828 bits (2139), Expect = 0.0, Method: Composition-based stats. Identities = 436/855 (50%), Positives = 596/855 (69%), Gaps = 10/855 (1%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGIN---A 57 M ++ T+K LA A LA+ + + PLH+ AL+ G + + AG N A Sbjct: 1 MNPEKFTHKTNETLAGAHELAMNSGHAQLTPLHVAVALITDHNGILRQAIIGAGGNEEAA 60 Query: 58 GQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALE 117 + N+AL +LP ++ S L++V+ + RGD ++ + +L L Sbjct: 61 NSVERVFNKALKKLPTQSPPPDEIPVSTTLIKVVRRAQSSQKSRGDTHLAVDQLILGLL- 119 Query: 118 SRGTLADILKAAGATTANITQAIEQMRG--GESVNDQGAEDQRQALKKYTIDLTERAEQG 175 + D+LK AG +T+ + +E++RG G+ V + QALK Y DL E+A G Sbjct: 120 EDSQIGDLLKEAGVSTSRVKSEVEKLRGKEGKKVESASGDTTFQALKTYGRDLVEQA--G 177 Query: 176 KLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGR 235 KLDPVIGRDEEIRR I++L RRTKNNPVLIGEPGVGKTA+VEGLAQRI+ G+VP L Sbjct: 178 KLDPVIGRDEEIRRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLAEV 237 Query: 236 RVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDA 295 R++ALDMGALVAGAKYRGEFEERLK VL ++ + EG VILFIDE+H ++GAG+ +G+MDA Sbjct: 238 RLIALDMGALVAGAKYRGEFEERLKSVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDA 297 Query: 296 GNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKE 355 N+ KP LARG+L C+GATTL+EYR+Y+EKDAA ERRFQ+V+VAEPSV DTI+ILRGLKE Sbjct: 298 ANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTISILRGLKE 357 Query: 356 RYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRL 415 RYE HH V+I D A+V AA LS RYI R LPDKAIDL+DEA +++R+Q+DS+PEE+D L Sbjct: 358 RYEGHHGVRIQDRALVVAAQLSSRYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNL 417 Query: 416 DRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTI 475 +R+ +QL++E AL KE D+ASK RL + EL D + L ++K EK + + + Sbjct: 418 ERKRMQLEVELHALEKEKDKASKARLVEVRRELDDLRDKLQPLMMKYKKEKERIDELRRL 477 Query: 476 KAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAE 535 K + E+ A+++A R DLAR ++L+YG I E+E + + M +L V + Sbjct: 478 KQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIANLEGTTDENM-MLTETVGPEQ 536 Query: 536 IAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPN 595 IAEV++RWTGIPV+R+ ++++E+L+ + + LH RV+GQ++AV AV+ A+ RSRAGL P Sbjct: 537 IAEVVSRWTGIPVTRLGQNDKERLIGLAERLHQRVVGQDQAVSAVAEAVLRSRAGLGRPQ 596 Query: 596 RPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVG 655 +P GSFLFLGPTGVGKTEL KALA +FD + +VRIDMSE+ME+HSVSRL+GAPPGYVG Sbjct: 597 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVG 656 Query: 656 YEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVI 715 ++EGG LTEAVRRRPYSV+L DEVEKAH VFN LLQVLDDGRLTDGQGRTVDF NTV+I Sbjct: 657 HDEGGQLTEAVRRRPYSVVLFDEVEKAHIAVFNTLLQVLDDGRLTDGQGRTVDFTNTVII 716 Query: 716 MTSNLGSDLIQER-FGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASI 774 MTSNLG++ + G+ ++ V+ V +FRPE +NR+DE+VVF PL + + Sbjct: 717 MTSNLGAEHLLSGLVGKCTMQDARDRVMQEVRRHFRPELLNRLDEIVVFDPLSHDQLRKV 776 Query: 775 AQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQIL 834 A++Q+K + RL ERG + ++D AL ++ YDPVYGARP++R +++++ L++ ++ Sbjct: 777 ARLQMKDVASRLAERGIALAVTDAALDVVLAESYDPVYGARPIRRWLEKKVVTELSKMLI 836 Query: 835 SGELVPGKVIRLEVN 849 E+ + ++ Sbjct: 837 REEIDENSTVYIDAG 851 >UniRef50_Q7UM33 Chaperone protein clpB n=21 Tax=Bacteria RepID=CLPB_RHOBA Length = 881 Score = 827 bits (2136), Expect = 0.0, Method: Composition-based stats. Identities = 473/878 (53%), Positives = 611/878 (69%), Gaps = 24/878 (2%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 R+D+LT + Q +A+AQ+ A N I+PLH++SA +NQ G +PLL ++ +L Sbjct: 3 FRIDKLTTQAQNVVAEAQAQATSAGNAEIDPLHVLSAAVNQRDGITTPLLEKINVDVPKL 62 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG 120 ++ + L +LP G G + S L L A+ D ++S+E ++ + Sbjct: 63 KSLLTSELEKLPHASGM-GQARVSAKLQAALEASATSAESLKDEYVSTEHLLVGLARTDN 121 Query: 121 TLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPV 180 ++L G + ++ A+ Q+RG V D AE QAL+K+ IDLT+ A+ GKLDPV Sbjct: 122 KAKNLLSLLGVSDNDLLTAMSQIRGSARVTDPNAESTYQALEKFGIDLTQLAQSGKLDPV 181 Query: 181 IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL 240 IGRD EIRR IQVL RRTKNNPVLIG+PGVGKTAI EGLA RI G+VP+ LKG++V++L Sbjct: 182 IGRDNEIRRVIQVLSRRTKNNPVLIGQPGVGKTAIAEGLALRIFEGDVPQSLKGKKVVSL 241 Query: 241 DMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLK 300 DMGALVAGAK+RG+FEERLK VL ++ +G VILFIDELH +VGAG A+G+ DA N+LK Sbjct: 242 DMGALVAGAKFRGDFEERLKSVLREVKDSDGKVILFIDELHLVVGAGNAEGSADAANLLK 301 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELH 360 P LARG L C+GATTLDEYRQ+IEKDAALERRFQ VFV EP+VEDT+AILRGLK RYE H Sbjct: 302 PELARGALRCIGATTLDEYRQHIEKDAALERRFQPVFVGEPNVEDTVAILRGLKPRYESH 361 Query: 361 HHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRII 420 H V+ITD A+VAAA LS RYIADR LPDKAIDLIDEAAS + M+ +S PE +DRL RR+ Sbjct: 362 HGVRITDSALVAAANLSDRYIADRFLPDKAIDLIDEAASRLAMEKESVPEPIDRLQRRLR 421 Query: 421 QLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELE 480 QL+L + L+ E + ++ + + EE+ + + + L+E+W+ EK L Q+++ E++ Sbjct: 422 QLELVHRQLVDEQEASAVDKRVEVEEEMESAKAELASLKEQWETEKMGLDDVQSVRQEVD 481 Query: 481 QAKIAIEQ----ARRVGDLARMSELQYGKIPELEKQLEAATQLEGKT------------- 523 Q + Q A+ E Y ++ +++ +L + Sbjct: 482 QLQHRFAQLDADAKEKQLRGESPEDAYSEMLQVQSRLRELQARIDEAEKHDDSADQTKEE 541 Query: 524 -----MRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVD 578 RLLR +VT+ EIAEV++ WTG+PV+RMME+ER KLL ME+ LH RV+GQ+EAV Sbjct: 542 PGDEKRRLLRKEVTEEEIAEVVSTWTGVPVTRMMETERAKLLVMEERLHQRVVGQDEAVT 601 Query: 579 AVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFM 638 AVS+A+RRSR+GL DPNRPIGSFLFLGPTGVGKTELCKALA MFD + AMVRIDMSEFM Sbjct: 602 AVSDAVRRSRSGLQDPNRPIGSFLFLGPTGVGKTELCKALAEVMFDDESAMVRIDMSEFM 661 Query: 639 EKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGR 698 E+HSVSRL+GAPPGYVGYEEGG LTEAVRRRPY+VILLDE+EKAHPDVFN+LLQVLDDGR Sbjct: 662 ERHSVSRLIGAPPGYVGYEEGGKLTEAVRRRPYAVILLDEMEKAHPDVFNVLLQVLDDGR 721 Query: 699 LTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGE-LDYAHMKELVLGVVSHNFRPEFINRI 757 LTDGQGRTV+F NTVV+MTSN+GS +IQ E M++ V + F PEF+NRI Sbjct: 722 LTDGQGRTVNFTNTVVVMTSNVGSQVIQRVTEEGGGEDEMRQAVEDALKARFLPEFLNRI 781 Query: 758 DEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPL 817 D+ V+FHPL + I I Q+QL+ L RL G I+D A+ ++E GYDP YGARPL Sbjct: 782 DDTVIFHPLQQTQIRRIVQLQLEELRSRLAANGLSFEITDAAIDQIAEVGYDPAYGARPL 841 Query: 818 KRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855 KR IQ++++NPLA IL G I+++ + D+ V Sbjct: 842 KRVIQREVQNPLASAILKNSYAEGTTIKIDHDGDQFVF 879 >UniRef50_Q73IE4 Chaperone protein clpB n=14 Tax=Rickettsiales RepID=CLPB_WOLPM Length = 853 Score = 817 bits (2111), Expect = 0.0, Method: Composition-based stats. Identities = 459/859 (53%), Positives = 621/859 (72%), Gaps = 9/859 (1%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M L++ T K + + AQ ALG +Q P HL+ +L E G V L+ + G N + Sbjct: 1 MDLNKFTEKAKSLIQSAQMKALGAGHQIFMPEHLLKVMLEDESGLVQDLINACGGNVQSI 60 Query: 61 RTDINQALNRLPQVEGTG-GDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAA-LES 118 ++ A+ +LP +EG G G +Q S+++ +V +A++ D+F++ E + + Sbjct: 61 SDAVDSAIKKLPVIEGPGSGGLQLSREIAKVFEDSIGIAKRNKDSFVAVERLLQGLTAQK 120 Query: 119 RGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLD 178 T+ IL G T + + +MR G S + +E++ A KKYT D+TE A QGKLD Sbjct: 121 DDTVGKILAENGVTPQKLNSVVAEMRKGSSADSPNSEEKLNAAKKYTKDVTELAMQGKLD 180 Query: 179 PVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVL 238 PVIGRDEEIRRT+QV RRTKNNPVLIGEPGVGKTAIVEGLA RI+ +VP GL +VL Sbjct: 181 PVIGRDEEIRRTMQVSLRRTKNNPVLIGEPGVGKTAIVEGLANRIVANDVPLGLHDAKVL 240 Query: 239 ALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNM 298 ALD+GAL+AG K+RGEFEERLK V+N+L++ EG VILFIDELHT+VGAG GAMDA N+ Sbjct: 241 ALDLGALIAGTKFRGEFEERLKAVINELSRAEGKVILFIDELHTLVGAGATSGAMDASNL 300 Query: 299 LKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYE 358 LKPALARGE+ C+GATTLDEYRQ+IEKD AL RRFQ VF+++P+ DTI+ILRGLKERYE Sbjct: 301 LKPALARGEVRCIGATTLDEYRQHIEKDPALARRFQPVFISQPTETDTISILRGLKERYE 360 Query: 359 LHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418 +HH ++ITD AI+AAATLS+RYI DR LPDKAIDLIDEAAS +R+++DSKPE +D L+R+ Sbjct: 361 VHHGIRITDGAIIAAATLSNRYITDRFLPDKAIDLIDEAASRVRIEMDSKPEVIDELERK 420 Query: 419 IIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAE 478 +IQLK+E +AL KESDE SK+RL +NEE+ + ++++L +W+ EK ++ Q + Sbjct: 421 VIQLKIEAEALKKESDENSKQRLKKINEEIENLNSKFADLNSKWQMEKNKIARIQETAEK 480 Query: 479 LEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAE 538 L+ A+ +E +R G+L R EL YG IP+LE +L+ E T L+ +VT +IA Sbjct: 481 LDNARKELELVQRSGNLGRAGELMYGVIPQLENELKNQ---EKVTDSFLKKEVTGDDIAN 537 Query: 539 VLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPI 598 ++++WTGIPV MM SE+EKLL ME E+ RVIGQ +A++A+SNA+RRSR+G+ D N+P Sbjct: 538 IVSKWTGIPVDNMMHSEKEKLLNMENEIGRRVIGQKDAIEAISNAVRRSRSGVQDTNKPF 597 Query: 599 GSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEE 658 GSFLFLGPTGVGKTEL KALA F+FD A++R DMSE+MEKHSVS+L+GAPPGYVGYE+ Sbjct: 598 GSFLFLGPTGVGKTELAKALAEFLFDDQSALLRFDMSEYMEKHSVSKLIGAPPGYVGYEQ 657 Query: 659 GGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTS 718 GG LTEAVRRRPY VIL DE+EKA+PD+FN+LLQ+LD+GRLTD G+ +DFRNT++I+TS Sbjct: 658 GGRLTEAVRRRPYQVILFDEIEKANPDIFNLLLQILDEGRLTDSHGKLIDFRNTILILTS 717 Query: 719 NLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQ 778 NLG++++ + + ++ V+ +V FRPEF+NR+DE+++FH L I I +Q Sbjct: 718 NLGAEIMLKGNVD----SVRNEVMQIVKSAFRPEFLNRLDEIIIFHSLTRDDIYKIIDVQ 773 Query: 779 LKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGEL 838 L K L +R I + EA +L+++ GYDP YGARPLKR IQ+ I+N LA+ +LSGE+ Sbjct: 774 FSYLQKTLAKRKLSISLLQEAKELIAQTGYDPEYGARPLKRVIQECIQNNLAKLVLSGEV 833 Query: 839 VPGKVIRLEVNEDRIVAVQ 857 V + + ++ I+ + Sbjct: 834 VENDELIVYALDNEILVKK 852 >UniRef50_Q7VQF3 Chaperone protein clpB n=10 Tax=Proteobacteria RepID=CLPB_BLOFL Length = 872 Score = 813 bits (2100), Expect = 0.0, Method: Composition-based stats. Identities = 585/861 (67%), Positives = 704/861 (81%), Gaps = 5/861 (0%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGG-SVSPLLTSAGINAGQ 59 MRLDR FQLAL+DAQS+A+G DNQFIEP+H+M L ++ S+ LL AG N Q Sbjct: 1 MRLDRFDRSFQLALSDAQSIAIGKDNQFIEPVHVMYTFLKEKKYKSIRNLLIHAGSNVDQ 60 Query: 60 LRTDINQALNRLPQVEGTGGD--VQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALE 117 L + Q N LP+VE GD VQ S LV++LNLCDKLAQK N I SE+F++AAL+ Sbjct: 61 LYKSVEQVCNDLPRVESVDGDREVQCSHALVKILNLCDKLAQKYHSNIIFSEVFIIAALQ 120 Query: 118 SRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKL 177 S+ L+ +LK +G + + ++ + S++D +++ Q L+++T+D+T AEQ L Sbjct: 121 SQDVLSILLKKSGIVKELLEKLVQYEQSNYSIHDDSFKNRTQILEQFTVDITSLAEQNNL 180 Query: 178 DPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRV 237 DPVIGRDEEIRRTIQVLQRRTKNNPVLIG PGVGKTAIVEGLAQRIIN EVPEGLK R+ Sbjct: 181 DPVIGRDEEIRRTIQVLQRRTKNNPVLIGNPGVGKTAIVEGLAQRIINKEVPEGLKNSRI 240 Query: 238 LALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGN 297 L+LD+ AL+AG KYRGEFEER K VL ++K + N ILFIDELH MVGAGK DG+MDA N Sbjct: 241 LSLDIAALLAGTKYRGEFEERFKKVLYAVSK-DNNTILFIDELHVMVGAGKTDGSMDASN 299 Query: 298 MLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERY 357 M+KP LARGELHCVGATTLDEY +YIEKDAALERRFQK+F+ EP++E+TIAILRGLKERY Sbjct: 300 MIKPKLARGELHCVGATTLDEYSRYIEKDAALERRFQKIFIIEPNIENTIAILRGLKERY 359 Query: 358 ELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDR 417 ELHH+V ITDPAIVAAATLS+RYI+DRQLPDKAIDLIDEAASSIR+QIDSKPE+LDRLDR Sbjct: 360 ELHHNVHITDPAIVAAATLSNRYISDRQLPDKAIDLIDEAASSIRIQIDSKPEDLDRLDR 419 Query: 418 RIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKA 477 RIIQLKLE QAL KESDE SKKRL++L+ ELS KE++YS LE EWK E++SL Q IK+ Sbjct: 420 RIIQLKLECQALKKESDELSKKRLEILSMELSQKEQEYSVLESEWKRERSSLFDIQNIKS 479 Query: 478 ELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIA 537 +LE+AK ++Q+RR+GDLA+MSELQYG+IPELEK+L A Q K MRLLRN V++ EIA Sbjct: 480 DLEKAKTILDQSRRIGDLAQMSELQYGRIPELEKKLFNAIQSSNKKMRLLRNYVSEVEIA 539 Query: 538 EVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRP 597 EVL++WTGIP+SR++ +E+ KLL ME LH VIGQ+EAV +SNAIRRSR+GL+DP RP Sbjct: 540 EVLSKWTGIPISRILANEKNKLLNMETILHQLVIGQDEAVRVISNAIRRSRSGLSDPKRP 599 Query: 598 IGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYE 657 IGSF+FLGPTGVGKTELCKAL+ F+FD+D AMVRIDMSEFMEKHSVS+L+GAPPGY+GYE Sbjct: 600 IGSFMFLGPTGVGKTELCKALSQFLFDTDNAMVRIDMSEFMEKHSVSKLLGAPPGYIGYE 659 Query: 658 EGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMT 717 G YLTE++RRRPYS++LLDE+EKAH DVFNILLQVLDDGRLTD QGR VDF NTV+IMT Sbjct: 660 SGAYLTESIRRRPYSIVLLDEIEKAHLDVFNILLQVLDDGRLTDNQGRMVDFNNTVIIMT 719 Query: 718 SNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQI 777 SNLGSDLIQ++F DY MK+ VL VV+ FRPEFINRIDE+VVFHPL +H+ IA I Sbjct: 720 SNLGSDLIQKKFDISDYDTMKKTVLNVVNQYFRPEFINRIDEIVVFHPLSIKHLIDIANI 779 Query: 778 QLKRLYKRLEERGY-EIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSG 836 QLK LY RLEERGY I+++AL LS+ G+DP+YGARPLKR IQQ IENPL+Q+ILS Sbjct: 780 QLKYLYSRLEERGYPRTGITNKALLFLSKIGFDPIYGARPLKRIIQQYIENPLSQKILSD 839 Query: 837 ELVPGKVIRLEVNEDRIVAVQ 857 +L+PG+ I ++V D IV +Q Sbjct: 840 DLLPGRSITIDVQNDNIVFIQ 860 >UniRef50_Q7AJA9 Chaperone protein clpB n=4 Tax=Chlamydiales RepID=CLPB_CHLPN Length = 866 Score = 812 bits (2097), Expect = 0.0, Method: Composition-based stats. Identities = 426/861 (49%), Positives = 576/861 (66%), Gaps = 6/861 (0%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +++ ++ AL A LA + ++ HL+ ALL ++ N G L T Sbjct: 1 MEKFSDAVSEALEKAFELAKSSKHTYVTENHLLLALLENTESLFYLVIKDIHGNPGLLNT 60 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTL 122 + AL+R P V D +PS L +L + A+ GD +IS + +LA S Sbjct: 61 AVKDALSREPTVVEGEVDPKPSPGLQTLLRDAKQEAKTLGDEYISGDHLLLAFWSSNKEP 120 Query: 123 ADILKAAG-ATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVI 181 + K + ++ I ++R G ++ AE Q L+KY +LT A +GKLDPVI Sbjct: 121 FNSWKQTTKVSFKDLKNLITKIRRGNRMDSPSAESNFQGLEKYCKNLTALAREGKLDPVI 180 Query: 182 GRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALD 241 GRDEEIRRTIQVL RRTKNNP+LIGEPGVGKTAI EGLA R+I G+VPE LKG+++ LD Sbjct: 181 GRDEEIRRTIQVLSRRTKNNPMLIGEPGVGKTAIAEGLALRLIQGDVPESLKGKQLYVLD 240 Query: 242 MGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKP 301 MGAL+AGAKYRGEFEERLK VL D+ +G I+FIDE+HT+VGAG DGAMDA N+LKP Sbjct: 241 MGALIAGAKYRGEFEERLKSVLKDVESGDGEHIIFIDEVHTLVGAGATDGAMDAANLLKP 300 Query: 302 ALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHH 361 ALARG LHC+GATTL+EY++YIEKDAALERRFQ +FV EPS+ED + ILRGL+E+YE+ H Sbjct: 301 ALARGTLHCIGATTLNEYQKYIEKDAALERRFQPIFVTEPSLEDAVFILRGLREKYEIFH 360 Query: 362 HVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQ 421 V+IT+ A+ AA LS+RYI DR LPDKAIDLIDEAAS IRMQI S P +D +R + Sbjct: 361 GVRITEGALNAAVLLSYRYIPDRFLPDKAIDLIDEAASLIRMQIGSLPLPIDEKERELAA 420 Query: 422 LKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQ 481 L ++Q+A+ +E + ++ D + + + + + L W EK +SG + K LE Sbjct: 421 LIVKQEAIKREQSPSYQEEADAMQKSIDALREELASLRLGWDEEKKLISGLKEKKNSLES 480 Query: 482 AKIAIEQARRVGDLARMSELQYGKIPELEKQLEAAT-QLEGKTMRLLRNKVTDAEIAEVL 540 K + E+A RV D R++EL+Y IP+LE++++ L + RLL+ +V + IA+V+ Sbjct: 481 MKFSEEEAERVADYNRVAELRYSLIPQLEEEIKQDEASLNQRDNRLLQEEVDERLIAQVV 540 Query: 541 ARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGS 600 A WTGIPV +M+E E EKLL +E+ L RV+GQ AV AVS++IR +R GL DP RP+G Sbjct: 541 ANWTGIPVQKMLEGEAEKLLILEESLEERVVGQPFAVSAVSDSIRAARVGLNDPQRPLGV 600 Query: 601 FLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG 660 FLFLGPTGVGKTEL KALA+ +F+ +EAMVR DMSE+MEKHS+S+L+G+ PGYVGYEEGG Sbjct: 601 FLFLGPTGVGKTELAKALADLLFNKEEAMVRFDMSEYMEKHSISKLIGSSPGYVGYEEGG 660 Query: 661 YLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL 720 L+EA+RRRPYSV+L DE+EKA +V NILLQV DDG LTDG+ R V+ +N + IMTSN+ Sbjct: 661 SLSEALRRRPYSVVLFDEIEKADKEVLNILLQVFDDGILTDGKKRKVNCKNALFIMTSNI 720 Query: 721 GSDLIQERFGELDYAHMKELVL----GVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQ 776 GS + + + KE +L V+ PEF+NRIDE++ F PL ++ I I Sbjct: 721 GSPELADYCSKKGSELTKEAILSVVSPVLKRYLSPEFMNRIDEILPFVPLTKEDIVKIVG 780 Query: 777 IQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSG 836 IQ++R+ +RL+ R + D + LSE GYD +GARPLKR IQQ++ L++ +L G Sbjct: 781 IQMRRIAQRLKARRINLSWDDSVILFLSEQGYDSAFGARPLKRLIQQKVVILLSKALLKG 840 Query: 837 ELVPGKVIRLEVNEDRIVAVQ 857 ++ P I L + ++ +V + Sbjct: 841 DIKPDTSIELTMAKEVLVFKK 861 >UniRef50_Q6GIB2 Chaperone protein clpB n=1154 Tax=cellular organisms RepID=CLPB_STAAR Length = 869 Score = 799 bits (2064), Expect = 0.0, Method: Composition-based stats. Identities = 448/861 (52%), Positives = 606/861 (70%), Gaps = 12/861 (1%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M ++++T Q AL A L+ H Q IE ++SA LN+ +L A I QL Sbjct: 1 MDINKMTYAVQSALQQAVELSQQHKLQNIEIEAILSAALNESESLYKSILERANIEVDQL 60 Query: 61 RTDINQALNRLPQVEGTGGDV--QPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES 118 LN VEG SQ +++ + ++ D +IS E + +A++ Sbjct: 61 NKAYEDKLNTYASVEGDNIQYGQYISQQANQLITKAESYMKEYEDEYISMEHILRSAMDI 120 Query: 119 RGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLD 178 T + I + I+++RGG V Q E +AL KY DL E QGK+D Sbjct: 121 DQTTKHYINN---KVEVIKEIIKKVRGGNHVTSQNPEVNYEALAKYGRDLVEEVRQGKMD 177 Query: 179 PVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVL 238 PVIGRDEEIR TI++L R+TKNNPVLIGEPGVGKTAIVEGLAQRI+ +VPE L + V Sbjct: 178 PVIGRDEEIRNTIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPESLLDKTVF 237 Query: 239 ALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNM 298 LD+ ALVAGAKYRGEFEERLK VL ++ + +G +ILFIDE+H +VGAGK DGAMDAGNM Sbjct: 238 ELDLSALVAGAKYRGEFEERLKAVLKEVKESDGRIILFIDEIHMLVGAGKTDGAMDAGNM 297 Query: 299 LKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYE 358 LKP LARGELHC+GATTL+EYR+YIEKD+ALERRFQKV V+EP VEDTI+ILRGLKERYE Sbjct: 298 LKPMLARGELHCIGATTLNEYREYIEKDSALERRFQKVAVSEPDVEDTISILRGLKERYE 357 Query: 359 LHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418 ++H V+I D A+VAAA LS RYI DR LPDKAIDL+D+A ++IR ++ S P ELD+++RR Sbjct: 358 VYHGVRIQDRALVAAAELSDRYITDRFLPDKAIDLVDQACATIRTEMGSNPTELDQVNRR 417 Query: 419 IIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAE 478 ++QL++E+ AL ESD ASK+RL L EEL++++ + + L+ ++EK ++ Q +A+ Sbjct: 418 VMQLEIEESALKNESDNASKQRLQELQEELANEKEKQAALQSRVESEKEKIANLQEKRAQ 477 Query: 479 LEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTM-----RLLRNKVTD 533 L++++ A+E A+ +L + +ELQYG IP+LEK+L R++R VTD Sbjct: 478 LDESRQALEDAQTNNNLEKAAELQYGTIPQLEKELRELEDNFQDEQGEDSDRMIREVVTD 537 Query: 534 AEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLAD 593 EI +++++WTGIPVS+++E+EREKLL + LH RV+GQ++AVD VS+A+ R+RAG+ D Sbjct: 538 EEIGDIVSQWTGIPVSKLVETEREKLLHLSDILHKRVVGQDKAVDLVSDAVVRARAGIKD 597 Query: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGY 653 PNRPIGSFLFLGPTGVGKTEL K+LA +FDS++ M+RIDMSE+MEKH+VSRL+GAPPGY Sbjct: 598 PNRPIGSFLFLGPTGVGKTELAKSLAASLFDSEKHMIRIDMSEYMEKHAVSRLIGAPPGY 657 Query: 654 VGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTV 713 +G++EGG LTEAVRR PYSVILLDEVEKAH DVFN+LLQ+LD+GRLTD +GR+VDF+NT+ Sbjct: 658 IGHDEGGQLTEAVRRNPYSVILLDEVEKAHTDVFNVLLQILDEGRLTDSKGRSVDFKNTI 717 Query: 714 VIMTSNLGSDLIQERFGELD--YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHI 771 +IMTSN+GS ++ E E ++ V+ ++ F+PE +NR+D++V+F PL + Sbjct: 718 IIMTSNIGSQVLLENVKETGEITESTEKAVMTSLNAYFKPEILNRMDDIVLFKPLSIDDM 777 Query: 772 ASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQ 831 + I L +L RL E+ I +SD+A L + Y+P YGARPLKR +Q+QIE PLA+ Sbjct: 778 SMIVDKILTQLNIRLLEQRISIEVSDDAKAWLGQEAYEPQYGARPLKRFVQRQIETPLAR 837 Query: 832 QILSGELVPGKVIRLEVNEDR 852 ++ G I++ +N D Sbjct: 838 MMIKEGFPEGTTIKVNLNSDN 858 >UniRef50_C0GVK9 ATPase AAA-2 domain protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GVK9_9DELT Length = 873 Score = 794 bits (2051), Expect = 0.0, Method: Composition-based stats. Identities = 420/860 (48%), Positives = 594/860 (69%), Gaps = 5/860 (0%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M +D+ K Q + + LA+ ++Q + P HLMS+LLN L +G + +L Sbjct: 1 MLIDKFNLKSQELIESSSRLAVKKEHQHVTPWHLMSSLLNIGKNPTLTALQESGADLDKL 60 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG 120 ++ +L P+ + S+DL R+ ++A+K + +I +LAALE + Sbjct: 61 GGRVSTSLLAQPKALASAQQTPISRDLERLFINAQEIAEKAEEKYIGINHILLAALEIQE 120 Query: 121 TLADILKAAGATTANITQAIEQMRGGESVNDQGAE-DQRQALKKYTIDLTERAEQGKLDP 179 A L+ AGA +T A++Q+R + A D + L +YT DLTE A QG+LDP Sbjct: 121 L-AGALEEAGADREKLTLALQQVRSVDGPGQGKAPGDDFEYLAQYTKDLTESARQGELDP 179 Query: 180 VIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLA 239 VIGR+EEIR Q+L RR KNNP++IGEPGVGKTA+VEGLAQRI+NG+VPE L+ +LA Sbjct: 180 VIGREEEIRMASQILSRRLKNNPIIIGEPGVGKTAVVEGLAQRIVNGDVPESLQDVSILA 239 Query: 240 LDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNML 299 LD+G L+AGAKYRGEFEER K VL ++ GN+I FIDE+H +VGAG ++G MDA N++ Sbjct: 240 LDLGQLIAGAKYRGEFEERFKRVLQEITDA-GNIITFIDEIHMLVGAGGSEGTMDAANLI 298 Query: 300 KPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYEL 359 KPAL+RG++ CVGATT +EYR++IEKD+AL RRFQ V V EP + T+AILRG+K +YE Sbjct: 299 KPALSRGDIRCVGATTSEEYRKHIEKDSALMRRFQTVTVEEPDHDKTLAILRGIKGKYET 358 Query: 360 HHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRI 419 HH + I+D ++ A+A LS RYI+DR LPDKAIDL+D+A +++R+ + SKPE++D++D++I Sbjct: 359 HHGIHISDSSLGASAKLSQRYISDRFLPDKAIDLMDQAGAALRISLASKPEDIDKIDQQI 418 Query: 420 IQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAEL 479 ++L++E AL E+D S +RL+++ L+D + Q + E W+ +K + + L Sbjct: 419 VELEIEAGALQGETDRLSMQRLEVVQNTLADLKEQSRTMTEAWEQQKEAAETLAKARKTL 478 Query: 480 EQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRL--LRNKVTDAEIA 537 + AK +EQ R D +R++ELQY IPE E+ L + + +IA Sbjct: 479 DDAKKELEQKVRQEDFSRVAELQYKIIPEAEQVLAEYENFDADQEPENGSPRALLPQDIA 538 Query: 538 EVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRP 597 ++RWTGIPVS++ME E+E+ L++E L RV+GQ++ ++ +S A+RRSRAG+ DPNRP Sbjct: 539 ACVSRWTGIPVSKLMEEEKERWLQLEDYLRKRVVGQDQVLETISKAVRRSRAGVQDPNRP 598 Query: 598 IGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYE 657 +GSFL LGPTGVGKTE+ KALA F+FD + ++VRIDMSEFMEKHSV+RL GAPPGYVGYE Sbjct: 599 LGSFLMLGPTGVGKTEMAKALAEFLFDDERSLVRIDMSEFMEKHSVARLTGAPPGYVGYE 658 Query: 658 EGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMT 717 EGG LT +RRRPYSV+L DEVEKAHPD FN+ LQVLDDGRLTDGQGRT F NTV++MT Sbjct: 659 EGGVLTNKIRRRPYSVVLFDEVEKAHPDAFNLFLQVLDDGRLTDGQGRTTHFYNTVILMT 718 Query: 718 SNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQI 777 SNLG++ I+ E + M+ ++ VV FRPEF+NR+D++++ +PL + + I I Sbjct: 719 SNLGAETIEPAETEEEVQKMRSTLMDVVRGFFRPEFLNRLDDILICNPLTPEVMPPIVDI 778 Query: 778 QLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGE 837 QLKRL K L +RG E+ ISDEA LL+++G++P+YGARPLKRAIQ +++PLA+ ++ Sbjct: 779 QLKRLNKLLADRGIEMDISDEAKHLLAQDGFNPLYGARPLKRAIQTSLQDPLAEMLIKEG 838 Query: 838 LVPGKVIRLEVNEDRIVAVQ 857 + G I ++V + R+ + Sbjct: 839 MDEGGSINVDVEDGRLTIRK 858 >UniRef50_C3XMZ6 ATP-dependent protease ATP-binding subunit n=4 Tax=Helicobacter RepID=C3XMZ6_9HELI Length = 857 Score = 794 bits (2049), Expect = 0.0, Method: Composition-based stats. Identities = 433/858 (50%), Positives = 604/858 (70%), Gaps = 11/858 (1%) Query: 1 MRL-DRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQ 59 M L ++LTN Q L SLAL + NQ IEP+HL A+L ++ L I+ Sbjct: 1 MNLLEKLTNTLQETLEQGASLALHNKNQEIEPIHLFWAMLTNTSSLLNQALNRLNIDKTA 60 Query: 60 LRTDINQALNRLPQVEG-TGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES 118 L + + LPQ T +++ S++L LN D LA K GD++I+ + F+LA L+ Sbjct: 61 LELEAKSIASALPQSSSVTKENLKISRNLSDALNQADGLATKNGDSYIALDTFILANLQE 120 Query: 119 RGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLD 178 L + + + E MR G ++ Q A++ ++L+K+ IDLT++A +GKLD Sbjct: 121 PTI--RNLFSKFLDINELKKTFEAMRAGAKIDSQSADENLESLEKFGIDLTKKAIEGKLD 178 Query: 179 PVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVL 238 PVIGRDEEI +Q+L R+TKNNP+L+GEPGVGKTA+VEGLAQRI+ EVP L+ +RV+ Sbjct: 179 PVIGRDEEITHMMQILIRKTKNNPILLGEPGVGKTAVVEGLAQRIVKKEVPLSLQNKRVI 238 Query: 239 ALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNM 298 ALDM ALVAGAKYRGEFE+RLK V++++ K GNVILFIDE+HT+VGAG ++G MDA N+ Sbjct: 239 ALDMSALVAGAKYRGEFEDRLKKVIDEVKKS-GNVILFIDEIHTIVGAGASEGGMDAANI 297 Query: 299 LKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYE 358 LKPALARGELH +GATTL EYR+Y EKDAAL+RRFQ V + EP+V + + ILRG+KER E Sbjct: 298 LKPALARGELHTIGATTLKEYRKYFEKDAALQRRFQPVMLNEPNVNEALQILRGIKERLE 357 Query: 359 LHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418 HH+V ITD A+VAAA LS RYI DR LPDKAIDLIDEAA+ ++MQI+S+P EL ++ R Sbjct: 358 AHHNVTITDSALVAAAKLSSRYITDRFLPDKAIDLIDEAAAELKMQIESEPSELAKVKRE 417 Query: 419 IIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAE 478 + L++E++AL+ E E ++ R+ + +ELSDKE LE +++ EK + IK E Sbjct: 418 MEALQVEKEALLMEKSEKNQARIAEIQKELSDKEEVKKALEAQFETEKQVFNKIANIKIE 477 Query: 479 LEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE---GKTMRLLRNKVTDAE 535 ++ + A+R GD ++ +E+ YGKIP+LE +L+ Q + LLRN V Sbjct: 478 IDSLRTQSTLAKRNGDFSKAAEIDYGKIPQLENELKEQNQKWENMQENGTLLRNAVLPES 537 Query: 536 IAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPN 595 IA V++RWT IP+ +M++ E++K+L +E+EL V+GQ+ A+ A++ AI+R++AGL++ N Sbjct: 538 IAAVISRWTQIPIKKMLQDEKDKILGIEEELKKDVVGQDNALHAIARAIKRNKAGLSELN 597 Query: 596 RPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVG 655 RPIGSFLFLGPTGVGKTE K LA F+FDS++ ++RIDMSE+MEKH+ SRLVGAPPGYVG Sbjct: 598 RPIGSFLFLGPTGVGKTESAKTLARFLFDSEKNLIRIDMSEYMEKHAASRLVGAPPGYVG 657 Query: 656 YEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVI 715 YEEGG LTEAVRR+PYSV+L DE+EKAHPDVFN+LLQVLDDGRLTD +G T+DFRNT++I Sbjct: 658 YEEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNMLLQVLDDGRLTDNKGVTIDFRNTIII 717 Query: 716 MTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIA 775 +TSN+ S+ I E D ++ V + F+PEF+NR+D++++F+PLG + I SI Sbjct: 718 LTSNIASNAIMEIS---DLTEREKAVKEALKGYFKPEFLNRLDDIIIFNPLGLEQITSIV 774 Query: 776 QIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILS 835 +I K + K+++ER + + + A + +++ G+DP+YGARPLKRA+ ++IE+ LA IL Sbjct: 775 EILFKTIQKKVQERDINVTLEESAKEFIAKVGFDPIYGARPLKRALYEEIEDRLADLILQ 834 Query: 836 GELVPGKVIRLEVNEDRI 853 ++ G + I Sbjct: 835 DKIKEGSKVSFYAENGSI 852 >UniRef50_C9RKR5 ATPase AAA-2 domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKR5_FIBSS Length = 855 Score = 792 bits (2046), Expect = 0.0, Method: Composition-based stats. Identities = 426/861 (49%), Positives = 586/861 (68%), Gaps = 15/861 (1%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 + TN + LA AQSL + ++ HL L+ ++ L S G+ +LR Sbjct: 1 MSDFTNDAEKVLAKAQSLRDRCSHSYLGAAHLAVGLVEGPDATLKKLYKSKGVKPNELRG 60 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALE--SRG 120 + + ++P++EG DV+P DL R+L + A++ ++ ++A ++ Sbjct: 61 RLEPFVQKIPRMEGVNPDVEPDSDLNRILRAAVQAARQV-SRMVTPGDLLVALMKFSGDR 119 Query: 121 TLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPV 180 LA + + A +T + + G +++ LK Y +L E A GKL PV Sbjct: 120 GLAKVFEDALGSTEVVETWLSDPFAG-----AANAEEQSPLKLYGRELVEMAADGKLSPV 174 Query: 181 IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL 240 IGR+EEIRR I +L R+TKNNP L+GEPGVGKTAIVEGLA+RI G+VP+ LKG++V AL Sbjct: 175 IGREEEIRRVILILSRKTKNNPCLVGEPGVGKTAIVEGLAERIYRGDVPDALKGKKVFAL 234 Query: 241 DMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLK 300 D+ AL+AGAKYRG+FEERLK V++ + + +GN ++FIDELH +VGAGK +G+MD GNMLK Sbjct: 235 DLSALMAGAKYRGDFEERLKSVIDAIEE-DGNTLMFIDELHNIVGAGKTEGSMDLGNMLK 293 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELH 360 P LARGELHC+GATT EYR+YIEKD+ALERRFQ V V+EPS ++ I+ILRG+K+ ++ H Sbjct: 294 PKLARGELHCIGATTTQEYRKYIEKDSALERRFQPVQVSEPSEDEAISILRGIKDGFDAH 353 Query: 361 HHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRII 420 H V++ D A+VAA LS+RYI+DR LPDKAIDLIDEAAS ++ Q+D+ PE LD L R+ + Sbjct: 354 HGVRLHDNALVAAVKLSNRYISDRFLPDKAIDLIDEAASLVKTQMDTVPEALDTLQRKEL 413 Query: 421 QLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELE 480 Q+K+E+QAL KE+DEAS KRL L E+L+ + +++E W+ +A+ + Q +K L+ Sbjct: 414 QMKIEEQALSKETDEASVKRLKELREDLAVTDAAVKQMQERWQDRRAAFAEVQDLKKALK 473 Query: 481 QAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRL--LRNKVTDAEIAE 538 AK +EQA DL R +EL+Y KI +EK+L T+ K+ L +VT+ IA Sbjct: 474 AAKDEMEQAEARYDLNRAAELKYNKIVNIEKELAQKTEALRKSAEEGGLSEEVTEETIAL 533 Query: 539 VLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPI 598 V++RWTGIPV+++ E E+ KLL +++ LH RVIGQ+EAV+AVS AI R+R+GL+ N PI Sbjct: 534 VVSRWTGIPVTKLCEGEKAKLLHLDERLHARVIGQDEAVEAVSEAILRNRSGLSRENAPI 593 Query: 599 GSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEE 658 GSFLFLGPTGVGKTEL KALA +FDS+ A+VRIDMSE+MEKHSVSRL+GAPPGYVGYEE Sbjct: 594 GSFLFLGPTGVGKTELAKALAVELFDSENALVRIDMSEYMEKHSVSRLIGAPPGYVGYEE 653 Query: 659 GGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTS 718 GG LTEAVR PY VILLDE+EKAHPDVFN LLQVLDDGRLTDG+GRTV+F+NT+++MTS Sbjct: 654 GGQLTEAVRTHPYCVILLDEIEKAHPDVFNTLLQVLDDGRLTDGKGRTVNFKNTLILMTS 713 Query: 719 NLGSDLIQERFGELDYAHMKEL----VLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASI 774 NLG++ + ++ V + FRPEF+NR+DEV+VF L ++ I I Sbjct: 714 NLGAEKFRLSAANAKNGEPPQVALADVEADLHAFFRPEFLNRLDEVLVFQSLSKKQIREI 773 Query: 775 AQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQIL 834 +++ L R + + +SD AL ++E Y P +GARP++R I++ IE PL+ IL Sbjct: 774 VKLKFADLANRAARQDLVLTLSDAALDAIAEGAYQPEFGARPIQRYIERNIERPLSHAIL 833 Query: 835 SGELVPGKVIRLEVNEDRIVA 855 SG + K ++ + V Sbjct: 834 SGTVSAAKPAVVDYKDGMFVV 854 >UniRef50_Q4FXS7 Serine peptidase, putative n=12 Tax=cellular organisms RepID=Q4FXS7_LEIMA Length = 867 Score = 789 bits (2037), Expect = 0.0, Method: Composition-based stats. Identities = 409/848 (48%), Positives = 593/848 (69%), Gaps = 5/848 (0%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 T +A +LA N +++P+HL + E S ++ G A ++ + Sbjct: 8 WTQAASDLMARMAALARKKANGYLDPVHLAYVMFEDENSLASRVVRKLG--AASVKDGLE 65 Query: 66 QALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADI 125 ++ +P +P+ D++RV+N ++ GD ++++ F+LA ES+ + I Sbjct: 66 ARVDAIPTQMPAPTQPRPNSDMMRVMNTAEQERAALGDTLMAADHFLLALHESKE-VGRI 124 Query: 126 LKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDE 185 L AAGA I + +MR G+ + +D ++L KY +DL ++AE GKLDPVIGR + Sbjct: 125 LDAAGAGKKAIRATLLEMRKGKKITSDFQDDNYESLNKYAVDLCKQAEDGKLDPVIGRAD 184 Query: 186 EIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGAL 245 EI RTI+VL RRTKNNPVLIGEPGVGKTAIVEG+AQ+++ G+VP+ L G R+ +LDMGAL Sbjct: 185 EILRTIRVLSRRTKNNPVLIGEPGVGKTAIVEGIAQQVVRGDVPDTLSGIRIFSLDMGAL 244 Query: 246 VAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALAR 305 +AGAKYRGEFEERLK VLN++ + + +ILFIDE+H ++GAGK+DGAMDA N+LKP LAR Sbjct: 245 IAGAKYRGEFEERLKAVLNEVKESDNKIILFIDEIHLVLGAGKSDGAMDAANLLKPLLAR 304 Query: 306 GELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQI 365 GEL +GATTL+EYRQY+EKDAA ERRF V V EPSVE+ +ILRGLK+RYE HH VQI Sbjct: 305 GELRTIGATTLEEYRQYVEKDAAFERRFMPVQVHEPSVEECTSILRGLKDRYEQHHGVQI 364 Query: 366 TDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLE 425 TD A+V AA L+ RYI +R LPDKAIDLIDEA +++R+ + S+P E+D L+R+ QL++E Sbjct: 365 TDKAVVVAAQLAGRYITNRFLPDKAIDLIDEACANVRVTLSSRPAEIDALERKKRQLEIE 424 Query: 426 QQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIA 485 ++AL ++ D ++K+RL + E+ E + L +++ E+ + Q +A+L++ K+ Sbjct: 425 ERALQRDKDASAKERLKAVKAEIQKVEEKLGPLLAKYEQERGRIDELQATQAKLDEKKVK 484 Query: 486 IEQARRVGDLARMSELQYGKIPELEKQLEAATQL-EGKTMRLLRNKVTDAEIAEVLARWT 544 +E+A R+ D+ ++L+Y IP L+ ++ + + E + +L+ VT+ +IA V++RWT Sbjct: 485 LERAERMRDMETAADLKYNVIPILQDRIRSLKEAIEKQKATMLQGTVTETDIATVVSRWT 544 Query: 545 GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFL 604 IPV+++ ++ERE+LL + +LH RV GQ+EAV V+ AI RSRAGLA +RP GSFLFL Sbjct: 545 NIPVTKLSQTERERLLHLADQLHLRVKGQDEAVSRVAEAILRSRAGLARSDRPTGSFLFL 604 Query: 605 GPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTE 664 GPTGVGKTEL KA+A+ +FD + MVR+DMSE+ME+HSV+RL+GAPPGYVG+EEGG LTE Sbjct: 605 GPTGVGKTELSKAVASELFDDAKYMVRLDMSEYMEQHSVARLIGAPPGYVGHEEGGQLTE 664 Query: 665 AVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDL 724 VRRRPY+V+LLDEVEKAHP+VFN+LLQVLDDGRLTD GRTVDF NT++IMTSNLG+ Sbjct: 665 PVRRRPYTVVLLDEVEKAHPNVFNVLLQVLDDGRLTDSHGRTVDFCNTIIIMTSNLGAQY 724 Query: 725 IQERFGELDYAHMKEL-VLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLY 783 +Q + + V+G V FRPEFINR+D++++F LG + + I + + L Sbjct: 725 LQNMDTSPKAYEVAQAQVMGEVRKFFRPEFINRLDDIILFRSLGLKEMTGIIDLITEELN 784 Query: 784 KRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKV 843 RL+++ + +++EA + + E+ +D GARPL+R +++ I L++ I+S EL P Sbjct: 785 GRLKDQSIRVSLTEEAKQYVLESAFDADMGARPLRRWVEKNITTELSRMIISQELSPNST 844 Query: 844 IRLEVNED 851 +++ ++ + Sbjct: 845 VKVTLSSN 852 >UniRef50_Q822Q4 Chaperone protein clpB n=11 Tax=cellular organisms RepID=CLPB_CHLCV Length = 864 Score = 789 bits (2036), Expect = 0.0, Method: Composition-based stats. Identities = 415/861 (48%), Positives = 578/861 (67%), Gaps = 6/861 (0%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +D++++ AL A LA N ++ H + LL ++ N L + Sbjct: 1 MDKISDAVSEALEKAFELAQSAKNPYVSENHFLKCLLENTESLFYLIIKDIHNNPKLLTS 60 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALE-SRGT 121 +++AL+ P V +PS L +L + A+ GD ++S + +LA + ++ Sbjct: 61 AVDEALSLEPSVIEGSAMPKPSPGLQSLLLDAKQEAKDLGDEYLSGDHVLLAFWKSNKEP 120 Query: 122 LADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVI 181 A K + ++ + I +R G ++ AE+ + L+KY +LT A++GKLDPVI Sbjct: 121 FASWKKTVKISLDDLKKLIINIRRGNRMDSPSAENNLRGLEKYCKNLTLLAKEGKLDPVI 180 Query: 182 GRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALD 241 GRDEEIRRT+QVL RRTKNNP+LIGEPGVGKTAI EGLA RI+ G++PE LKG+++ LD Sbjct: 181 GRDEEIRRTVQVLSRRTKNNPMLIGEPGVGKTAIAEGLALRIVQGDIPESLKGKQLYVLD 240 Query: 242 MGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKP 301 MGAL+AGAKYRGEFEERLK VL D+ +G ILFIDE+HT+VGAG DGAMDA N+LKP Sbjct: 241 MGALIAGAKYRGEFEERLKSVLKDVESVDGESILFIDEVHTLVGAGATDGAMDAANLLKP 300 Query: 302 ALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHH 361 ALARG LHC+GATTL+EY++YIEKDAALERRFQ +FV EPS+ED + ILRGL+E+YE+ H Sbjct: 301 ALARGTLHCIGATTLNEYQKYIEKDAALERRFQPIFVTEPSLEDAVFILRGLREKYEIFH 360 Query: 362 HVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQ 421 V+IT+ A+ AA LS+RYI DR LPDKAIDLIDEAAS IRMQI S P +D +R + Sbjct: 361 GVRITEGALNAAVLLSYRYIPDRFLPDKAIDLIDEAASLIRMQIGSLPLPIDEKERELAA 420 Query: 422 LKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQ 481 L ++Q+A+ +E + ++ + + + + + + L W EK ++G + K LE Sbjct: 421 LIVKQEAIKREKAPSYQEEAAAMQQSIEQLKEELAALRLRWDEEKKLITGLKEKKNSLEN 480 Query: 482 AKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQ-LEGKTMRLLRNKVTDAEIAEVL 540 K + E+A RV D R++EL+Y IP LE+++ + L + RLL+ +V + IA+V+ Sbjct: 481 MKFSEEEAERVADYNRVAELRYSLIPALEEEIREDEEALNQRDNRLLQEEVDERLIAQVV 540 Query: 541 ARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGS 600 A WTGIP+ +M+E E EKLL +E+ L RV+GQ A+ AVS++IR +R GL+DP RP+G Sbjct: 541 ANWTGIPIQKMLEGEAEKLLVLEESLEERVVGQPFAISAVSDSIRAARVGLSDPQRPLGV 600 Query: 601 FLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG 660 FLFLGPTGVGKTEL KALA+ +F+ +EAMVR DM+E+MEKHSVS+L+G+PPGYVGYEEGG Sbjct: 601 FLFLGPTGVGKTELAKALADLLFNKEEAMVRFDMTEYMEKHSVSKLIGSPPGYVGYEEGG 660 Query: 661 YLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL 720 L+EA+RRRPYSV+L DE+EKA +VFNILLQ+ D+G LTD + R V+ +N + IMTSN+ Sbjct: 661 SLSEALRRRPYSVVLFDEIEKADKEVFNILLQIFDEGILTDSKKRKVNCKNALFIMTSNI 720 Query: 721 GSDLIQERFGELDYAHMKELVL----GVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQ 776 GS + + + KE VL + F PEFINRID+++ F PL + I I Sbjct: 721 GSQELADYCAKKGSRVSKETVLSVVAPTLKKYFSPEFINRIDDILPFVPLNTEDIVKIVG 780 Query: 777 IQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSG 836 IQ++R+ +RL ER + D + LSE GYD +GARPLKR IQQ++ L++ +L G Sbjct: 781 IQMRRVAQRLLERRVTLTWDDSVILYLSEQGYDSSFGARPLKRLIQQKVVTLLSKALLKG 840 Query: 837 ELVPGKVIRLEVNEDRIVAVQ 857 ++ I L +++D ++ + Sbjct: 841 DIKSDTSIELTMSKDVLLFKK 861 >UniRef50_D1B2U8 ATPase AAA-2 domain protein n=4 Tax=Bacteria RepID=D1B2U8_SULD5 Length = 856 Score = 785 bits (2027), Expect = 0.0, Method: Composition-based stats. Identities = 413/861 (47%), Positives = 602/861 (69%), Gaps = 13/861 (1%) Query: 1 MR--LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAG 58 M ++LTN+ + A+ A SLAL N PLH+ L+ ++ + I+ Sbjct: 1 MNSLFEQLTNQMREAIESAISLALHSKNNEATPLHVTWGLITNSASILNQVFNKMNIDKS 60 Query: 59 QLRTDINQALNRLPQVEG-TGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALE 117 + ++ + +LP + ++ S+ LV L + L +++GD+++S + ++LA +E Sbjct: 61 AIELEVKSEVQKLPTASHVSKENISLSRTLVESLQKAEGLMKQKGDSYLSVDTWLLANIE 120 Query: 118 SRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKL 177 + + K + +E +RGG+ ++ Q A++ ++L+KY I+LT+ A +GKL Sbjct: 121 NEPLKKILGKYL--DLLAFKKNLEALRGGKKIDKQSADENLESLEKYGINLTKLASEGKL 178 Query: 178 DPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRV 237 DPVIGRDEEI+R +Q+L R+TKNNP+LIGEPG GKTAI EGLA RI + +VP L+ + V Sbjct: 179 DPVIGRDEEIQRMMQILIRKTKNNPILIGEPGTGKTAIAEGLALRIAHNDVPLSLQNKSV 238 Query: 238 LALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGN 297 +ALDM AL+AGAKYRGEFE+RLK V++++ K GNVILFIDE+HT+VGAG ++G+MDA N Sbjct: 239 VALDMSALIAGAKYRGEFEDRLKAVIDEVKKS-GNVILFIDEIHTIVGAGASEGSMDAAN 297 Query: 298 MLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERY 357 +LKPALARGELH +GATTL EYR+Y EKDAAL+RRFQ V V EPS+ + + ILRG+KE Sbjct: 298 ILKPALARGELHTIGATTLREYRKYFEKDAALQRRFQPVTVNEPSINEALQILRGIKEHL 357 Query: 358 ELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDR 417 E HH+V I D A++AAA LS RYI+DR LPDKAIDLIDEAA+ ++MQI+S+P EL R+ R Sbjct: 358 EAHHNVSIQDSALIAAAKLSSRYISDRFLPDKAIDLIDEAAAELKMQIESEPTELSRIKR 417 Query: 418 RIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKA 477 I L +E++AL+ E ++ + +RL + +EL D + + LE +++ EK + IK+ Sbjct: 418 AISTLMVEKEALLMEKNKKNDERLSAIEKELGDAKEKMRSLETQFENEKQVFNDIAAIKS 477 Query: 478 ELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEG---KTMRLLRNKVTDA 534 + E + E A++ + + +E++YGK+PEL K+ E ++ LL+N V + Sbjct: 478 QAEALRREAEIAKKQSEFNKAAEIEYGKLPELLKKEEELKLKWEKMVESGTLLKNSVDEE 537 Query: 535 EIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADP 594 IA ++++WTGIPV++M++SE+ K+L +E+ L V+GQ+ A+ A+ AI+R++AGL++ Sbjct: 538 MIATIVSKWTGIPVNKMLQSEKAKVLHVEEYLKKEVVGQDAAIKAIGRAIKRNKAGLSEQ 597 Query: 595 NRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYV 654 N+PIGSFLFLGPTGVGKT+ KALANF+FD+ +A++R DMSE+MEKHSVSRLVGAPPGYV Sbjct: 598 NKPIGSFLFLGPTGVGKTQSAKALANFLFDTTKALIRFDMSEYMEKHSVSRLVGAPPGYV 657 Query: 655 GYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVV 714 GY+EGG LTEAVRR+PYSV+L DE+EKAHPDVFNILLQVLD+GRLTD +G TVDF+NT++ Sbjct: 658 GYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNILLQVLDEGRLTDNKGVTVDFKNTII 717 Query: 715 IMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASI 774 I+TSN+ S I E GE E V+ + +F+PEF+NR+D++++F+PL E + I Sbjct: 718 ILTSNIASSKIMEFEGEKRT----EEVMKELRMHFKPEFLNRLDDIIIFNPLSEDGLREI 773 Query: 775 AQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQIL 834 I + K+L + + ++ A L++E G+DPVYGARPLKRA+ + +E+ LA+ IL Sbjct: 774 VTIMFGDIEKKLAHKEIKAELTTTAKSLIAEAGFDPVYGARPLKRALYELVEDKLAELIL 833 Query: 835 SGELVPGKVIRLEVNEDRIVA 855 +L G+ I ++ +IV Sbjct: 834 EDKLHEGEGIVIDAENGKIVI 854 >UniRef50_Q10YU4 ATPase AAA-2 n=7 Tax=Bacteria RepID=Q10YU4_TRIEI Length = 905 Score = 783 bits (2023), Expect = 0.0, Method: Composition-based stats. Identities = 456/894 (51%), Positives = 626/894 (70%), Gaps = 40/894 (4%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 + T + A+ +Q +A + NQ +E HL+ ALL Q G+ + +L+ +GI +L Sbjct: 5 DPSKFTEQAWDAIVKSQDVAKRYQNQQLEVEHLIIALLEQ-QGTANKILSRSGIEPEKLL 63 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGT 121 ++ + R P+V G+ + Q L L+L D+ +K D FI+ E F+LA E + Sbjct: 64 QQVDAFVRRQPKV-GSIEHLYLGQGLETFLDLADQAKEKWEDKFIAVEHFLLAFHEDKRL 122 Query: 122 LADIL-----------------KAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKY 164 ++ + I+ RG V DQ E AL KY Sbjct: 123 GNKLIGGGTPQLPTRPGFAPPQTTLQIEFKELEATIKAFRGSSKVEDQNPEATYDALAKY 182 Query: 165 TIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRII 224 DLTE A+ GKLDPVIGRDEE+RR + L RRTKNNPVLIGEPGVGKTAI EGLAQRI+ Sbjct: 183 GRDLTELAKVGKLDPVIGRDEEVRRVVSCLSRRTKNNPVLIGEPGVGKTAIAEGLAQRIV 242 Query: 225 NGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMV 284 NG+VPE LK R++++LDMG+L+AGAK+RGEFEERL+ VL ++ +G ++LFIDELHT+V Sbjct: 243 NGDVPESLKERQLISLDMGSLIAGAKFRGEFEERLRSVLREVTHSDGQIVLFIDELHTVV 302 Query: 285 GAGKADGAM---DAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEP 341 GAG G DAGN+LKP LARGEL C+GATT+DEYR++IEKDAALERRFQKV V +P Sbjct: 303 GAGSGGGNSSGVDAGNLLKPMLARGELRCIGATTIDEYRKHIEKDAALERRFQKVEVGQP 362 Query: 342 SVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSI 401 SVEDTI+ILRGLK+RYE HH V+ITD A+VAAATLS+RYI+DR LPDKAIDL+DEAA+ + Sbjct: 363 SVEDTISILRGLKDRYETHHGVKITDAALVAAATLSNRYISDRFLPDKAIDLVDEAAAQL 422 Query: 402 RMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRL-------------DMLNEEL 448 +M+I SKP EL+ +DRRI+QL++E+ ++ E +K++ + + E+ Sbjct: 423 KMEITSKPVELEAIDRRIMQLEMEKLSIEGELSGTNKEKNSEAILSTKVSPALERITNEI 482 Query: 449 SDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPE 508 + +++ + +W EK L+ ++KAE ++ K+ IEQA R DL ++L+YG++ Sbjct: 483 NSLKQKQEKFSSQWSGEKELLNSINSLKAEEDKIKVQIEQAERAYDLNTAAQLKYGQLET 542 Query: 509 L----EKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQ 564 + E Q +++ + LLR +VTD +IA ++A+WTGIPV+R++ESER+KLL++E+ Sbjct: 543 VHRDREAQEAELLKVQAQGSFLLREQVTDGDIATIVAKWTGIPVNRLLESERQKLLQLEK 602 Query: 565 ELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFD 624 LH RVIGQ+EAV AV+ AIRR+RAG+ DP RPIGSF+FLGPTGVGKTEL +ALA F+FD Sbjct: 603 HLHQRVIGQSEAVAAVAAAIRRARAGMKDPGRPIGSFMFLGPTGVGKTELARALAGFLFD 662 Query: 625 SDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHP 684 D+A+VR+DMSE+MEKH+V+RLVGAPPGYVGY++GG L+EAVRR PYS++L DEVEKAHP Sbjct: 663 RDDALVRVDMSEYMEKHAVARLVGAPPGYVGYDQGGQLSEAVRRHPYSLVLFDEVEKAHP 722 Query: 685 DVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFG-ELDYAHMKELVLG 743 DVFNILLQVLDDGR+TD QGR +DF NTV++MTSN+GS+ I + G + Y M + V+G Sbjct: 723 DVFNILLQVLDDGRITDSQGRVIDFSNTVIVMTSNIGSEYILDVAGDDSKYEEMYKRVMG 782 Query: 744 VVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLL 803 + +FRPEF+NR+DE+++FH L + + I +IQ+KR+ + L E+ + ++D L + Sbjct: 783 ALRKHFRPEFLNRVDEIILFHTLRKSELRQIVEIQVKRIERLLGEQKISLQLTDATLDHI 842 Query: 804 SENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857 +E GYDPVYGARPLKRAIQ+++ENPLA QIL V G V+ ++ + +V + Sbjct: 843 TEVGYDPVYGARPLKRAIQRELENPLANQILENRFVCGDVVIIDFVDSGLVFKK 896 >UniRef50_B5Y5I5 Predicted protein n=4 Tax=cellular organisms RepID=B5Y5I5_PHATR Length = 997 Score = 781 bits (2017), Expect = 0.0, Method: Composition-based stats. Identities = 428/886 (48%), Positives = 602/886 (67%), Gaps = 33/886 (3%) Query: 4 DRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQ------EGGSVSP-----LLTS 52 D+ T ++A ++ + E ++ +LN E + +L Sbjct: 89 DKYTEAAWSSIAGLTKVSDYYSASTFEAPFVLEFMLNPNKHNGGEDADAAKRVVEKILNK 148 Query: 53 AGINAGQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFV 112 AG+N +LR ++++ L + P+V + + L +VL Q GD+++S+E V Sbjct: 149 AGVNLNRLRCELDEYLAKQPRVSDPTNKI-MGRTLQKVLETARNGKQALGDSYVSTEGLV 207 Query: 113 LAALESRGTLAD--ILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTE 170 LA ++ +++ T + E + + AE AL KY +DLTE Sbjct: 208 LAMVKEDDKFTREALMRQNVKYTDVLEVVKEMRKKSGPAISRSAESMYDALTKYGVDLTE 267 Query: 171 RAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPE 230 RAEQGKLDPVIGRD+EIRR IQ+L RRTKNNPVLIG+PGVGKTAI EG+AQR+I+G+VP+ Sbjct: 268 RAEQGKLDPVIGRDDEIRRAIQILSRRTKNNPVLIGDPGVGKTAIAEGIAQRMIDGDVPD 327 Query: 231 GLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKAD 290 LK R++ LDMGALVAGA RG+FEERLK V+ ++ + +G +ILFIDE+HT+VGAG A Sbjct: 328 SLKNCRLIGLDMGALVAGASMRGQFEERLKAVVEEVTQSDGEIILFIDEMHTVVGAGAAQ 387 Query: 291 GAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAIL 350 G+MDA N+LKPALARG+L C+GATT++EYR+YIEKD ALERRFQ+V + +P+ EDT++IL Sbjct: 388 GSMDASNLLKPALARGQLRCIGATTINEYRKYIEKDKALERRFQQVMIDQPTPEDTVSIL 447 Query: 351 RGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPE 410 RGLK RYELHH V+I D A++AAA LSHRYI DR LPDKAIDL+DEA + + +I SKP Sbjct: 448 RGLKPRYELHHGVRIRDEALLAAAKLSHRYIPDRFLPDKAIDLVDEACAKLNNEITSKPT 507 Query: 411 ELDRLDRRIIQLKLEQQALMKESDEASKK-----------RLDMLNEELSDKERQYSELE 459 LD +DRRIIQL++E+ +L + ++ + RL ++EEL + + EL Sbjct: 508 ILDEIDRRIIQLEMERLSLQSDFEKYEEDGNTFKATSENFRLAKIDEELGSLKYEQQELN 567 Query: 460 EEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQL 519 +W AEK ++ + +K ++ + K+ IE+ R DL + +EL+Y +P LE++LE + Sbjct: 568 MKWMAEKGAVDRLKDVKEKIAKVKLDIEKFEREFDLNKAAELKYSDLPPLERELEELENI 627 Query: 520 EG-----KTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574 R+LR++V +IA V+A WTGIP +++ESER+++L M +L R+IGQ+ Sbjct: 628 GQYDLGPGEERMLRDEVVADDIAGVVAVWTGIPPGKLLESERDRILTMGDKLRERLIGQD 687 Query: 575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 634 EA+ V+ A++RSRAGL DP++PI S +FLGPTGVGKTE KALA FMFDS++A++RIDM Sbjct: 688 EAIRVVTEAVQRSRAGLNDPSKPIASLIFLGPTGVGKTECAKALAEFMFDSEDALIRIDM 747 Query: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694 SE+MEKH+VSRL+GAPPGYVGY+EGG LT+A+RRRPY+V+L DE+EKAHPDVFN++LQ+L Sbjct: 748 SEYMEKHTVSRLLGAPPGYVGYDEGGQLTDAIRRRPYAVLLFDEMEKAHPDVFNVMLQLL 807 Query: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGEL---DYAHMKELVLGVVSHNFRP 751 DDGRLTD +G TV+FRNT+ I TSN+GS I + G D M+ V + FRP Sbjct: 808 DDGRLTDSKGNTVNFRNTICIFTSNVGSQEILDLNGSSEIGDQEIMRSRVTEAMRERFRP 867 Query: 752 EFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPV 811 EF+NRIDE V+F+ L + ++ I ++++RL KRLEE+ + + +EAL L+E G+DPV Sbjct: 868 EFLNRIDEHVIFNSLNKNNLRGIVVLEVRRLEKRLEEKQMRLVLREEALDFLAEVGFDPV 927 Query: 812 YGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857 YGARPLKR IQ+++E +A+ IL GE V G I ++V +R+ + Sbjct: 928 YGARPLKRTIQRELETVVARGILGGEFVDGDTILVDVVNERLNVRR 973 >UniRef50_Q9ZMH1 Chaperone protein clpB n=85 Tax=Bacteria RepID=CLPB_HELPJ Length = 856 Score = 768 bits (1983), Expect = 0.0, Method: Composition-based stats. Identities = 413/859 (48%), Positives = 602/859 (70%), Gaps = 12/859 (1%) Query: 1 MR-LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQ 59 M +++T++ L A +LAL H N + P+H++ A+LN G + L ++ Sbjct: 1 MNLFEKMTDQLHETLDSAIALALHHKNAEVTPMHMLFAMLNNSQGILIQALQKMPVDIEA 60 Query: 60 LRTDINQALNRLPQVEG-TGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES 118 L+ + LN+ +V + ++Q +Q L++ L L KRGD+FI+++ ++LA + Sbjct: 61 LKLSVQSELNKFAKVSQISKQNIQLNQALIQSLENAQGLMAKRGDSFIATDAYLLANM-- 118 Query: 119 RGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLD 178 +LK T + + +E +R G ++ D+ + ++L+K+ IDLT++A + KLD Sbjct: 119 -NLFESVLKPY-LDTKELQKTLESLRKGRTIQDKNDDSNLESLEKFGIDLTQKALENKLD 176 Query: 179 PVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVL 238 PVIGRDEEI R +Q+L R+TKNNP+L+GEPGVGKTA+VEGLAQRI+N EVP+ L +RV+ Sbjct: 177 PVIGRDEEIIRMMQILIRKTKNNPILLGEPGVGKTAVVEGLAQRIVNKEVPKTLLNKRVV 236 Query: 239 ALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNM 298 ALD+ LVAGAKYRGEFEERLK V+ ++ K NVILFIDE+HT+VGAG ++G MDA N+ Sbjct: 237 ALDLSLLVAGAKYRGEFEERLKKVIEEVKKS-ANVILFIDEIHTIVGAGASEGGMDAANI 295 Query: 299 LKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYE 358 LKPALARGELH +GATTL EYR+Y EKD AL+RRFQ + + EPS+ + + ILRGLKE E Sbjct: 296 LKPALARGELHTIGATTLKEYRKYFEKDMALQRRFQPILLNEPSINEALQILRGLKETLE 355 Query: 359 LHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418 HH++ I D A++A+A LS RYI DR LPDKAIDLIDE A+ ++MQ++S+P +L + R Sbjct: 356 THHNITINDSALIASAKLSSRYITDRFLPDKAIDLIDEGAAQLKMQMESEPAKLSSVKRS 415 Query: 419 IIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAE 478 I +L++E+QAL E+ E++ KR+ + +ELSD + + +LE +++ EK +K E Sbjct: 416 IQRLEMEKQALEMENKESNHKRMQEILKELSDLKEEKIQLEAQFENEKEVFKEISRLKME 475 Query: 479 LEQAKIAIEQARRVGDLARMSELQYGKIPELEKQ---LEAATQLEGKTMRLLRNKVTDAE 535 +E K E+ +R GD + +E++Y KIPE EK+ L+ + + LL+N +T+ Sbjct: 476 MEGLKKEAERFKRNGDYQQAAEIEYSKIPEKEKKEKELQHKWETMQQNGALLQNALTENN 535 Query: 536 IAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPN 595 IAE++++WT IPV +M++SE+ ++L +E EL RV+GQ +A+ A++ AI+R++AGL+D N Sbjct: 536 IAEIVSQWTHIPVQKMLQSEKNRVLNIESELQKRVVGQEKALKAIAKAIKRNKAGLSDSN 595 Query: 596 RPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVG 655 +PIGSFLFLGPTGVGKTE KALA F+FDSD+ ++RIDMSE+MEKH++SRL+GA PGYVG Sbjct: 596 KPIGSFLFLGPTGVGKTESAKALAQFLFDSDKNLIRIDMSEYMEKHAISRLIGAAPGYVG 655 Query: 656 YEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVI 715 YEEGG LTEAVRR+PYSV+LLDEVEKAHPDVFN+LLQVLD+G LTD +G VDF+NT++I Sbjct: 656 YEEGGQLTEAVRRKPYSVVLLDEVEKAHPDVFNLLLQVLDEGHLTDSKGVRVDFKNTILI 715 Query: 716 MTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIA 775 +TSN+ S + E +L A ++ + + F+PEF+NR+DE++ F+ L I +I Sbjct: 716 LTSNVASGALLEE--DLSEADKQKAIKESLRQFFKPEFLNRLDEIISFNALDSHAIINIV 773 Query: 776 QIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILS 835 I + + K+ ERG I + ++A +L++E G+D YGARPLKRA+ + +E+ LA+ IL Sbjct: 774 GILFENVQKKALERGINITLDEKAKELIAEAGFDRFYGARPLKRALYEMVEDKLAELILE 833 Query: 836 GELVPGKVIRLEVNEDRIV 854 ++ + V + IV Sbjct: 834 DKIKENDSVAFVVENNEIV 852 >UniRef50_D2VCN5 Heat shock protein 101 n=1 Tax=Naegleria gruberi RepID=D2VCN5_NAEGR Length = 891 Score = 760 bits (1961), Expect = 0.0, Method: Composition-based stats. Identities = 393/880 (44%), Positives = 588/880 (66%), Gaps = 28/880 (3%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLL-------TSA 53 M D+ T+K ++DA +A + FI PLH+ + + N + L + Sbjct: 1 MNPDKFTDKTNQTISDAYMMAKDRKHIFISPLHVAAVIFNPDDKQSLGFLVCKKVSSSQK 60 Query: 54 GINAGQLRTDINQALN-RLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFV 112 I+ ++ ++ A+N ++ + D+ P++ LV VL +K+ + D+ ++ + + Sbjct: 61 TIDCNKIADELKNAMNTKISVQDPPVEDLAPNRRLVSVLQAAEKIKDQLDDHLLAVDHVL 120 Query: 113 LAALESRGTLADILK--AAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTE 170 LA ++ ILK T + + +RGG+ V+ + AE AL +Y +++ + Sbjct: 121 LALMDDSDVSNAILKATNNQLTKQVLKDTLALIRGGKKVDSKQAETGYDALNRYGVNMVD 180 Query: 171 RAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPE 230 A QGK DP+IGRD+E+ R I+VL RRTKNN L+ EPGVGK+A+VEGLA RI G+VP+ Sbjct: 181 MARQGKYDPLIGRDKELARMIRVLSRRTKNNCCLLAEPGVGKSALVEGLAMRIATGDVPK 240 Query: 231 GLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKA- 289 L+ ++ +LD+G++VAG+K+RGEFEERLK +L ++ + G+VILFIDE+HT+ GAG Sbjct: 241 NLQ-TQLYSLDLGSMVAGSKFRGEFEERLKSILKEVEES-GDVILFIDEIHTLSGAGSTG 298 Query: 290 DGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAI 349 D ++DA NM+KP LARG L +GATT EYR+YIEKDAALERRFQ V++AEP+V++TI+I Sbjct: 299 DNSLDASNMIKPLLARGVLRLIGATTPTEYRKYIEKDAALERRFQPVYLAEPNVQETISI 358 Query: 350 LRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKP 409 LRGLK RYE HH V+I D AIV AA LS RYI R PDK+IDLIDEA+++IR+Q++S+P Sbjct: 359 LRGLKSRYEAHHGVRILDSAIVEAARLSARYIQGRYNPDKSIDLIDEASANIRVQLNSRP 418 Query: 410 EELDRLDRRIIQLKLEQQALM---KESDEASKKRLDMLNEELSDKERQYSELEEEWKAEK 466 E +D L+R+ +QL++E AL SDE +K+RL+ + E+S + + ++ +++AE Sbjct: 419 EIIDTLERKKLQLQVEATALEKEKNYSDEKTKQRLEQVKNEISKVDEELKPIKLKYEAET 478 Query: 467 ASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMR- 525 + ++ + +LE+ K + A DLA S+L+YG IPE+E+ +++ + + Sbjct: 479 SLVNELREKNQKLEKLKAKMVDAEARYDLALASDLKYGAIPEIEESIQSLKKKIEQKEED 538 Query: 526 ----------LLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNE 575 + + VT +I EV+ARWTGIPV R+ ESE++K+L++E+ L RV+GQ + Sbjct: 539 DRKNGVNSANMTSDVVTPEQINEVIARWTGIPVQRLNESEKDKVLKLEERLMKRVVGQED 598 Query: 576 AVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMS 635 A+ ++S +I RS+AGL++PN+PIGSFLFLG +GVGKT L K++A +FD ++ MVRIDMS Sbjct: 599 AIKSLSESIIRSKAGLSNPNKPIGSFLFLGSSGVGKTYLAKSIAYELFDDEKHMVRIDMS 658 Query: 636 EFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLD 695 E ME+HSVSRL+G+P GYVGY + LTE VRR+PY+V+L DE+EKAHP V N+LLQ+LD Sbjct: 659 ELMEQHSVSRLIGSPAGYVGYSDDNQLTEPVRRQPYTVVLFDEIEKAHPRVLNVLLQLLD 718 Query: 696 DGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFIN 755 DGRLTDGQGRTVDF+NTV+IMTSN+GS + + +K+ V+ V +F PEF+N Sbjct: 719 DGRLTDGQGRTVDFKNTVIIMTSNIGSKHFL-TMNDNNKETVKKQVMNEVRQHFTPEFLN 777 Query: 756 RIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGAR 815 R+D+++ F PL +H+ ++ ++Q++ L +RL+ER I I D A +L+ G+DP YGAR Sbjct: 778 RLDDILFFEPLTSKHLVNVVRLQMESLTERLKERDISIDIRDSACELVISEGFDPNYGAR 837 Query: 816 PLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855 PL R IQ+ I L++ +L GEL G I ++ + + Sbjct: 838 PLARFIQKHIVTELSKLMLKGELRDGSQIVIQGVDGKFKF 877 >UniRef50_B0EI70 Heat shock protein, putative n=1 Tax=Entamoeba dispar SAW760 RepID=B0EI70_ENTDI Length = 840 Score = 750 bits (1937), Expect = 0.0, Method: Composition-based stats. Identities = 386/858 (44%), Positives = 562/858 (65%), Gaps = 30/858 (3%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M ++ T+ ++Q +A N +I P+H+M A++ +E V ++ G + +L Sbjct: 1 MDPNKWTDATVQMFKESQEIAFERKNAYIMPIHMMEAIVEEESNIVIRIVEMMGGDVNKL 60 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG 120 + +I + +N++P D+ +VL + + GD++++ ++ V++ +E + Sbjct: 61 KKEIKETMNKVPVQNPPPVDIGLHPTTQQVLRRAIEKQKIMGDSYLAIDVIVMSLMEEKE 120 Query: 121 TLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPV 180 ++ I+ +G + I +MR G+SV + AE Q +ALKKY DLT +AE GK+DP+ Sbjct: 121 -ISTIVGNSGINVKEFNKKITEMRKGQSVETKEAESQYEALKKYGNDLTAQAESGKMDPI 179 Query: 181 IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL 240 IGRDEEI+R I++L RRTKNNPVLIGEPGVGKTA+VEGLAQRI+ G+VP L+ RV+ L Sbjct: 180 IGRDEEIKRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPSNLQ-CRVIGL 238 Query: 241 DMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKA-DGAMDAGNML 299 DMGAL+AGA+YRG+FEERLK V+ ++ + + +ILFIDE+HT++GAG +GAMDA N+L Sbjct: 239 DMGALIAGAQYRGQFEERLKAVIKEVKESKIPIILFIDEIHTVLGAGATGEGAMDAANIL 298 Query: 300 KPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYEL 359 KP L+RGEL C+GATTL+EYR+Y+EKD A ERRFQ+V+V EPS EDT+ ILRG++E+YE Sbjct: 299 KPMLSRGELRCIGATTLEEYRKYVEKDPAFERRFQQVYVKEPSEEDTLYILRGIREKYEN 358 Query: 360 HHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRI 419 H+ + ITD A+V+AATLS RYI R LPDKAIDL + R K + Sbjct: 359 HYGLTITDSALVSAATLSKRYINGRFLPDKAIDLRNTI--KCRENSIRKRHKEXXXXXXX 416 Query: 420 IQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAEL 479 + + EL + +A K Sbjct: 417 XXXXXXXXXXXXXXXXXXXXXXXXXXXKEKGGSEEMKELATKIEAMKH------------ 464 Query: 480 EQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEV 539 +A DL ++L+Y IPE EK+++ + K ++ +VT +I EV Sbjct: 465 --------KAESTKDLEVAADLKYYAIPEAEKRMKELK-EQNKETTMISLQVTPTQIEEV 515 Query: 540 LARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIG 599 ++RWTGIPV++M ++E+ +L+++E+ELH RVIGQNEAV AVS+AI RSR GL + RP G Sbjct: 516 VSRWTGIPVTKMNQTEKTRLMKLEEELHKRVIGQNEAVTAVSDAIIRSRGGLGNEKRPTG 575 Query: 600 SFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEG 659 SF+FLGP+GVGKTEL KALA +FD ++ +VRIDMSE+ME HSVSRL+GAPPGYVGYEEG Sbjct: 576 SFMFLGPSGVGKTELAKALAVELFDDEQNIVRIDMSEYMESHSVSRLIGAPPGYVGYEEG 635 Query: 660 GYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSN 719 G LTEA+RR+PYSVIL DE+EKAHP VFN+LLQ+LD+GRLTDG+GRTVDF+NT+VIMTSN Sbjct: 636 GQLTEAIRRKPYSVILFDEIEKAHPQVFNVLLQLLDEGRLTDGRGRTVDFKNTIVIMTSN 695 Query: 720 LGSDLIQERFGELDY--AHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQI 777 LGS++I + +KE V+ +V F+PEF+NR+D++ VF PL E+ + I ++ Sbjct: 696 LGSEIIMKGVEREGQVSRKVKETVMEIVKKTFKPEFLNRLDDITVFSPLSEKELKEIVKL 755 Query: 778 QLKRLYKRLEERG--YEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILS 835 Q+ + K +++R E+ +++ A++ + ++GY YGARP++R I++ + + + I+S Sbjct: 756 QMGEVIKMIKKRYPLSEVEMTEAAIEGIIKSGYSIAYGARPMRRYIEKTVVTSITKSIIS 815 Query: 836 GELVPGKVIRLEVNEDRI 853 G + I+++ D+I Sbjct: 816 GMMKEKNKIQIDYENDKI 833 >UniRef50_C3XDZ0 ATP-dependent protease ATP-binding subunit n=2 Tax=Campylobacterales RepID=C3XDZ0_9HELI Length = 898 Score = 746 bits (1925), Expect = 0.0, Method: Composition-based stats. Identities = 398/893 (44%), Positives = 575/893 (64%), Gaps = 47/893 (5%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 D+LTN+ + L +A A+ H N +P+H + A+L + L N L Sbjct: 4 FDKLTNQMREILNNAAQFAITHKNNETQPIHTLLAMLADSNMLLYQALQKNNENINALIQ 63 Query: 63 DINQALNRLPQVEG-TGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGT 121 ++ +++LP+V ++ S+ L L A +GD+FI FV A L Sbjct: 64 NLTLEIDKLPKVSNANTQNMSLSKSLQEALQNALSFATTQGDSFIGVGSFVRANL--DSH 121 Query: 122 LADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVI 181 D+LK + ++ MR G ++ Q ++D + L KY I+L++ A Q KL+PVI Sbjct: 122 FKDLLKN--IDKLELINTLKNMRKGMKIDSQSSDDTLETLDKYGINLSKLAAQNKLNPVI 179 Query: 182 GRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALD 241 GR+EEI R +Q+L R+TKNNP+L+GEPGVGKTA+VEGLA +I EVP L+ ++V+ALD Sbjct: 180 GRNEEIERMMQILIRKTKNNPILLGEPGVGKTAVVEGLAIKIAKKEVPLSLQNKQVIALD 239 Query: 242 MGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKP 301 M AL+AGAKYRG+FEERLK V++++ K +ILFIDE+HT+VGAG ++G MDA N+LKP Sbjct: 240 MTALMAGAKYRGDFEERLKAVVDEV-KNNDEIILFIDEIHTIVGAGASEGGMDAANILKP 298 Query: 302 ALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHH 361 ALARGEL +GATTL EYR+Y EKDAAL RRFQ V + EPS + + I+RG+KE E HH Sbjct: 299 ALARGELRTIGATTLKEYRKYFEKDAALARRFQPVNINEPSQNEALQIMRGIKESLEAHH 358 Query: 362 HVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQ 421 +V ITD A+V + LS RYI +R LPDKAIDLIDEAA+ ++MQI+S+P+ + + R I Sbjct: 359 NVSITDGALVESVKLSSRYITNRYLPDKAIDLIDEAAAELKMQIESEPKAIAKAKRDIEA 418 Query: 422 LKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQ 481 L++E+ AL + +E RL + +EL D + + S L+ ++ EKA S +K ++E Sbjct: 419 LEVEKVALNLDKNEQHNTRLQEIEKELIDSKEKLSGLQSAFENEKAIFSDIAKVKNDIES 478 Query: 482 AKIAIEQARRVGDLARMSELQYGKIPELE---KQLEAATQLEGKTMRLLRNKVTDAEIAE 538 + E ARR GD AR E+++GKIP + K LEA Q K+ LL++ VT IAE Sbjct: 479 LRRESEIARRSGDYARAGEIEHGKIPNAQAELKNLEAKWQDLQKSGSLLKHAVTKESIAE 538 Query: 539 VLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPI 598 +++RWT IPV +M+ESE+ ++L +E+ L VIGQN+A+++++ AI+R++AGL D NRPI Sbjct: 539 IVSRWTQIPVGKMLESEKHRILHIEENLKASVIGQNKAIESIARAIKRNKAGLNDANRPI 598 Query: 599 GSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEE 658 SFLFLG +GVGKT+ KALA F+FDS++ +VR+DMSE+M++ ++L GA PGYVGYEE Sbjct: 599 ASFLFLGSSGVGKTQSAKALAKFLFDSEKELVRLDMSEYMQEIDATKLTGAAPGYVGYEE 658 Query: 659 GGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTS 718 GG LTEA++R+PYSV+L DEVEKAHP VFN+LLQVLDDGRL+D +G VDF+NT++I+TS Sbjct: 659 GGILTEAIKRKPYSVVLFDEVEKAHPKVFNVLLQVLDDGRLSDNKGVVVDFKNTIIILTS 718 Query: 719 NLGSDLIQERFG--------------------------------------ELDYAHMKEL 740 N+GS+ I E E A E Sbjct: 719 NIGSEFICEDSKEVAMKRDDIAALQKAIKEGNIESREKLEREKEILNSLVEAQRASQMEK 778 Query: 741 VLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEAL 800 + + FRPEF+NR+D+ ++F+ L I +I I +++ +L++R + ++D Sbjct: 779 IEQELKKFFRPEFLNRLDDKIIFNALSRDDIRNIIDILTQQVALKLKDRNITLVLTDSMK 838 Query: 801 KLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRI 853 L+++G+DPV+GARPLKRA+Q++IE+ LA IL+ EL + ++ E+ + Sbjct: 839 DYLADSGFDPVFGARPLKRAVQREIEDRLADLILNEELSEQSKVIFDIVENSV 891 >UniRef50_Q8IB03 ClpB protein, putative n=13 Tax=cellular organisms RepID=Q8IB03_PLAF7 Length = 1070 Score = 743 bits (1919), Expect = 0.0, Method: Composition-based stats. Identities = 401/919 (43%), Positives = 597/919 (64%), Gaps = 62/919 (6%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQ-EGGSVSPLLTSAGINAGQ 59 + D T K A++ + +D+ ++E L+ ALLN G +L +GI+ Sbjct: 151 INSDDYTEKAWEAISSLNKIGEKYDSAYVEAEMLLLALLNDSPDGLAERILKESGIDTQL 210 Query: 60 LRTDINQALNRLPQVE-GTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES 118 L +I+ L + P++ G G + L VL+ +L ++ D +IS E +L+ + Sbjct: 211 LVQEIDDYLKKQPKMPSGFGEQKILGRTLQTVLSTSKRLKKEFNDEYISIEHLLLSIISE 270 Query: 119 RGTLAD-ILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKL 177 L + +A+E++RG + V + E QAL+KY+ DLT A GKL Sbjct: 271 DSKFTRPWLLKYNVNYEKVKKAVEKIRGKKKVTSKTPEMTYQALEKYSRDLTALARAGKL 330 Query: 178 DPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRV 237 DPVIGRD EIRR IQ+L RRTKNNP+L+G+PGVGKTAIVEGLA +I+ G+VP+ LKGR++ Sbjct: 331 DPVIGRDNEIRRAIQILSRRTKNNPILLGDPGVGKTAIVEGLAIKIVQGDVPDSLKGRKL 390 Query: 238 LALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGK-ADGAMDAG 296 ++LDM +L+AGAKYRG+FEERLK +L ++ EG V++FIDE+HT+VGAG A+GA+DAG Sbjct: 391 VSLDMSSLIAGAKYRGDFEERLKSILKEVQDAEGQVVMFIDEIHTVVGAGAVAEGALDAG 450 Query: 297 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 356 N+LKP LARGEL C+GATT+ EYRQ+IEKD ALERRFQ++ V +PSV++TI+ILRGLKER Sbjct: 451 NILKPMLARGELRCIGATTVSEYRQFIEKDKALERRFQQILVEQPSVDETISILRGLKER 510 Query: 357 YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 416 YE+HH V+I D A+V AA LS RYI+ R LPDKAIDLIDEAAS++++Q+ SKP +L+ ++ Sbjct: 511 YEVHHGVRILDSALVQAAVLSDRYISYRFLPDKAIDLIDEAASNLKIQLSSKPIQLENIE 570 Query: 417 RRIIQLKLEQQA------------------------------------------------ 428 +++IQL++E+ + Sbjct: 571 KQLIQLEMEKISILGDKQKNLFNYSSVANTHNNNNNSSISSNNSSSYGNAEETEATVDYT 630 Query: 429 -----LMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAK 483 L K +E RL M++ +S+ ++ ++ + W EK+ + + IK ++ K Sbjct: 631 KSPNFLKKRINEKEIDRLKMIDRIMSELRKEQRKILDSWSTEKSYVDNIRAIKERIDVVK 690 Query: 484 IAIEQARRVGDLARMSELQYGKIPELEKQLEAAT----QLEGKTMRLLRNKVTDAEIAEV 539 I IE+A R DL R +EL++ +P+LEKQL+ A + R+L+++VT +I + Sbjct: 691 IEIEKAERYFDLNRAAELRFETLPDLEKQLKKAEENYLNDIPEKSRILKDEVTSEDIVNI 750 Query: 540 LARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIG 599 ++ TGI ++++++SE+EK+L +E ELH ++IGQ++AV V+ A++RSR G+ +P RPI Sbjct: 751 VSMSTGIRLNKLLKSEKEKILNLENELHKQIIGQDDAVKVVTKAVQRSRVGMNNPKRPIA 810 Query: 600 SFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEG 659 S +FLGPTGVGKTEL K LA+ +FD+ EA++ DMSE+MEKHS+S+L+GA PGYVGYE+G Sbjct: 811 SLMFLGPTGVGKTELSKVLADVLFDTPEAVIHFDMSEYMEKHSISKLIGAAPGYVGYEQG 870 Query: 660 GYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSN 719 G LT+AVR++PYS+IL DE+EKAHPDV+N+LL+V+D+G+L+D +G +FRNT++I TSN Sbjct: 871 GLLTDAVRKKPYSIILFDEIEKAHPDVYNLLLRVIDEGKLSDTKGNVANFRNTIIIFTSN 930 Query: 720 LGSDLIQERFGELDYAH-MKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQ 778 LGS I + + + +KE V+ V FRPEF NRID+ V+F L ++ + IA I+ Sbjct: 931 LGSQSILDLANDPNKKEKIKEQVMKSVRETFRPEFYNRIDDHVIFDSLSKKELKEIANIE 990 Query: 779 LKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGEL 838 ++++ RL ++ ++I I D + + YDP +GARPLKR IQ +IE +A +IL Sbjct: 991 IRKVANRLFDKNFKITIDDAVFSYIVDKAYDPSFGARPLKRVIQSEIETEIAVRILDETF 1050 Query: 839 VPGKVIRLEVNEDRIVAVQ 857 V I + + + ++ + Sbjct: 1051 VENDTINISLKDQKLHFSK 1069 >UniRef50_Q4L3I4 ATP-dependent Clp protease ATP-binding subunit clpC n=90 Tax=Bacteria RepID=CLPC_STAHJ Length = 824 Score = 743 bits (1918), Expect = 0.0, Method: Composition-based stats. Identities = 374/866 (43%), Positives = 525/866 (60%), Gaps = 78/866 (9%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M RLT + Q LA AQ A+ ++ I HL+ L+ + G + +L S I ++ Sbjct: 1 MLFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKV 60 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES-R 119 ++ + + + G + + +V+ L A+K NF+ +E +L + Sbjct: 61 IEEVEKLIG---HGQDQTGTLHYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENE 117 Query: 120 GTLADILKAAGATTANITQAIEQMRGGESVNDQGAE----DQRQALKKYTIDLTERAEQG 175 G A + + + G ++++ A + L DLT A+ G Sbjct: 118 GVAARVFANLDLNITKARAQVVKALGSPEMSNKNATANKSNNTPTLDGLARDLTVIAKDG 177 Query: 176 KLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGR 235 LDPV+GRD+EI R I+VL RRTKNNPVLIGEPGVGKTAI EGLAQ I+N EVPE LKG+ Sbjct: 178 TLDPVVGRDKEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKGK 237 Query: 236 RVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDA 295 RV++LDMG +VAG KYRGEFEERLK V+ ++ + GNVILFIDELHT+VGAG A+GA+DA Sbjct: 238 RVMSLDMGTVVAGTKYRGEFEERLKKVMEEIHQA-GNVILFIDELHTLVGAGGAEGAIDA 296 Query: 296 GNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKE 355 N+LKPALARGEL C+GATTLDEYR+ IEKDAALERRFQ + V EP+VEDTIAIL+GL++ Sbjct: 297 SNILKPALARGELQCIGATTLDEYRKNIEKDAALERRFQPIQVDEPTVEDTIAILKGLRD 356 Query: 356 RYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRL 415 RYE HH + I+D A+ AAA LS Y++DR LPDKAIDLIDEA+S +R++ + P L + Sbjct: 357 RYEAHHRINISDEALEAAAKLSDCYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEI 416 Query: 416 DRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTI 475 ++ I ++K E+ A + + + L ++ + E+QY + + EWK + Sbjct: 417 EQEIEKVKNEKDAAVHAQEFENA---ANLRDKQTKLEKQYEDAKNEWKTTQG-----DQS 468 Query: 476 KAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAE 535 + ++ + L +++E + ++ LE+ L + + + V Sbjct: 469 TSLSKEDIGEVIAGWTGIPLTKINETESDRLLNLEQTLHDRVIGQNDAVTSISKAVRR-- 526 Query: 536 IAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPN 595 +RAGL DP Sbjct: 527 ---------------------------------------------------ARAGLKDPK 535 Query: 596 RPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVG 655 RPIGSF+FLGPTGVGKTEL +ALA MF ++AM+R+DMSEFMEKH+VSRLVGAPPGYVG Sbjct: 536 RPIGSFIFLGPTGVGKTELARALAESMFGEEDAMIRVDMSEFMEKHAVSRLVGAPPGYVG 595 Query: 656 YEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVI 715 ++EGG LTE VRR+PYSVIL DE+EKAHPDVFNILLQVLDDG LTD +GR VDFRNTV+I Sbjct: 596 HDEGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRQVDFRNTVII 655 Query: 716 MTSNLGSDLIQE--------RFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLG 767 MTSN+G+ +Q+ DY +++ ++ + ++FRPEF+NR+D+++VFH L Sbjct: 656 MTSNVGAQELQDQRFAGFGGGSEGHDYETIRKTMMKELKNSFRPEFLNRVDDIIVFHKLS 715 Query: 768 EQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIEN 827 + + I + + +L +RL E+ I ++D+A + ++E GYDP YGARPL RAIQ+ +E+ Sbjct: 716 KDELKEIVTMMVNKLTQRLSEQDINIVVTDKAKEKIAEEGYDPEYGARPLIRAIQKTVED 775 Query: 828 PLAQQILSGELVPGKVIRLEVNEDRI 853 L++ IL G + GK + ++ + D Sbjct: 776 NLSELILDGNQIEGKEVVIDHDGDEF 801 >UniRef50_P31540 Heat shock protein hsp98 n=59 Tax=Dikarya RepID=HSP98_NEUCR Length = 927 Score = 741 bits (1913), Expect = 0.0, Method: Composition-based stats. Identities = 404/885 (45%), Positives = 587/885 (66%), Gaps = 35/885 (3%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQ---------------EGGSVSPLL 50 T++ + AL DA +LA + + + P+HL ALL+ ++ Sbjct: 7 FTDRAKKALEDAMALAEQYAHSQLLPVHLAVALLDPLPDPSKDQQNAPAGATSSLFRQVI 66 Query: 51 TSAGINAGQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSEL 110 A + + +AL RLP + V + VL ++L + + D +I+ + Sbjct: 67 ERAHGDPQLFDRALKKALVRLPSQDPPPDHVSMAPSFHTVLRKANELQKTQKDTYIAVDH 126 Query: 111 FVLAALESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAE--DQRQALKKYTIDL 168 + A E + + +A +T AI+ +RG + V+ + A+ ++ + L K+TID+ Sbjct: 127 LITALAEEPSIMNALKEANIPKPKLVTDAIQAIRGTKRVDSRNADTEEEHENLAKFTIDM 186 Query: 169 TERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEV 228 T A +GK+DPVIGR+EEIRR I++L RRTKNNPVLIGEPGVGKT +VEGLAQRI+N +V Sbjct: 187 TAMAREGKIDPVIGREEEIRRVIRILSRRTKNNPVLIGEPGVGKTTVVEGLAQRIVNADV 246 Query: 229 PEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGK 288 P+ L ++L+LD+GALVAG+KYRGEFEER+KGVL ++++ + +ILFIDE+H ++GAG Sbjct: 247 PDNLANCKLLSLDVGALVAGSKYRGEFEERMKGVLKEISESKEMIILFIDEIHLLMGAGA 306 Query: 289 A-DGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTI 347 + +G MDA N+LKP LARG+LHC+GATTL EYR+YIEKDAA ERRFQ+V V EPSV +TI Sbjct: 307 SGEGGMDAANLLKPMLARGQLHCIGATTLAEYRKYIEKDAAFERRFQQVIVKEPSVSETI 366 Query: 348 AILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDS 407 +ILRGLKE+YE+HH V I+D AIVAAA L+ RY+ R+LPD AIDLIDEAA+++R+ +S Sbjct: 367 SILRGLKEKYEVHHGVTISDAAIVAAANLAARYLTSRRLPDSAIDLIDEAAAAVRVARES 426 Query: 408 KPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKA 467 +PE +D L+R++ QLK+E AL +E DEASK RL+ ++ + E + L E+++ EK Sbjct: 427 QPEIIDSLERKLRQLKIEIHALSREKDEASKARLEQAKKDAENVEEELRPLREKYEQEKQ 486 Query: 468 SLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMR-- 525 Q + +LE + E+A R+GD +R ++LQY IPE E ++ + + Sbjct: 487 RAKALQEARMKLESLRQKAEEASRMGDHSRAADLQYYAIPEQEAVIKRLEKEKAAADAAL 546 Query: 526 ----------LLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNE 575 ++ + V +I E++ARWTGIPV+R+ SE+EKLL ME+ L V+GQ E Sbjct: 547 NAAAAETGGAMITDVVGPDQINEIVARWTGIPVTRLKTSEKEKLLHMEKHLSKIVVGQKE 606 Query: 576 AVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMS 635 AV +VSNAIR R+GL++PN+P SFLF GP+G GKT L KALA F+FD +AM+R DMS Sbjct: 607 AVQSVSNAIRLQRSGLSNPNQPP-SFLFCGPSGTGKTLLTKALAEFLFDDPKAMIRFDMS 665 Query: 636 EFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLD 695 E+ E+HS+SR++GAPPGYVG++ GG LTEA+RR+P+S++L DEVEKA +V +LLQ++D Sbjct: 666 EYQERHSLSRMIGAPPGYVGHDSGGQLTEALRRKPFSILLFDEVEKAAKEVLTVLLQLMD 725 Query: 696 DGRLTDGQGRTVDFRNTVVIMTSNLGSDLI--QERFGELDYAHMKELVLGVVSHNFRPEF 753 DGR+TDGQGR VD RN +V+MTSNLG++ + +ELV+ + + F PEF Sbjct: 726 DGRITDGQGRVVDARNCIVVMTSNLGAEYLSRPNAKDGKIDPTTRELVMNALRNYFLPEF 785 Query: 754 INRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLE--ERGYEIHISDEALKLLSENGYDPV 811 +NRI +V+F+ L + I I ++++ + KRL+ +R +I +S+EA L GY P Sbjct: 786 LNRISSIVIFNRLTRREIRKIVELRIAEIQKRLQDNDRNVKIEVSEEAKDKLGALGYSPA 845 Query: 812 YGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAV 856 YGARPL+R +++++ N LA IL G + G+V R+ V + +I + Sbjct: 846 YGARPLQRVLEKEVLNRLAVLILRGSIRDGEVARVVVQDGKITVL 890 >UniRef50_P31541 ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4A, chloroplastic n=62 Tax=cellular organisms RepID=CLPAA_SOLLC Length = 926 Score = 741 bits (1912), Expect = 0.0, Method: Composition-based stats. Identities = 364/875 (41%), Positives = 526/875 (60%), Gaps = 79/875 (9%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 +R T K + AQ A + F+ ++ L+ + G + +L S GIN R Sbjct: 93 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDAR 152 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG- 120 ++ + + R ++ + RVL L + A++ G N+I SE +L L Sbjct: 153 VEVEKIIGRGSGFIAV--EIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEG 210 Query: 121 TLADILKAAGATTANITQAIEQMRGGESVNDQGAED------QRQALKKYTIDLTERAEQ 174 A +L+ GA NI + +M G S + + L++Y +LT+ AE+ Sbjct: 211 VAARVLENLGADPTNIRTQVIRMVGESSEAVGASVGGGTSGLKMPTLEEYGTNLTKLAEE 270 Query: 175 GKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKG 234 GKLDPV+GR +I R Q+L RRTKNNP LIGEPGVGKTAI EGLAQRI NG+VPE ++G Sbjct: 271 GKLDPVVGRQAQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEG 330 Query: 235 RRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMD 294 ++V+ LDMG LVAG KYRGEFEERLK ++ ++ + + +ILFIDE+HT++GAG A+GA+D Sbjct: 331 KKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSD-EIILFIDEVHTLIGAGAAEGAID 389 Query: 295 AGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLK 354 A N+LKPALARGEL C+GATTLDEYR++IEKD ALERRFQ V V EPSV++TI IL+GL+ Sbjct: 390 AANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLR 449 Query: 355 ERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDR 414 ERYE+HH + TD AI AAA LSH+YI+DR LPDKAIDLIDEA S +R++ PEE Sbjct: 450 ERYEIHHKLHYTDEAIEAAAKLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARE 509 Query: 415 LDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQT 474 L++ + Q+ E+ ++ D L + D + Q S L ++ K + + S Sbjct: 510 LEKELRQITKEKNEAVRGQDFEKAG---ELRDREMDLKAQISALIDKNKEKSKAESEAGD 566 Query: 475 IKAEL--EQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVT 532 + E I + + ++S + ++ ++E+ L + + ++ + + Sbjct: 567 AAGPIVTEADIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHTRVIGQDEAVKAISRAIR 626 Query: 533 DAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLA 592 +R GL Sbjct: 627 R-----------------------------------------------------ARVGLK 633 Query: 593 DPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPG 652 +PNRPI SF+F GPTGVGK+EL K+LA + F S+EAM+R+DMSEFME+H+VS+L+G+PPG Sbjct: 634 NPNRPIASFIFSGPTGVGKSELAKSLATYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPG 693 Query: 653 YVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNT 712 YVGY EGG LTEAVRRRPY+V+L DE+EKAHPDVFN++LQ+L+DGRLTD +GRTVDF+NT Sbjct: 694 YVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNT 753 Query: 713 VVIMTSNLGSDLIQERF-----------GELDYAHMKELVLGVVSHNFRPEFINRIDEVV 761 ++IMTSN+GS +I++ + Y +K LV + FRPEF+NR+ E++ Sbjct: 754 LLIMTSNVGSSVIEKGGRRIGFDLDFDEKDSSYNRIKSLVTEELKQYFRPEFLNRLSEMI 813 Query: 762 VFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAI 821 VF L + + IA I LK ++ RL+ + E+ +++ + + GY+P YGARPL+RAI Sbjct: 814 VFRQLTKLEVKEIADIMLKEVFVRLKNKEIELQVTERFRDRVVDEGYNPSYGARPLRRAI 873 Query: 822 QQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAV 856 + +E+ +A+++L+GE+ G + ++V+ D V V Sbjct: 874 MRLLEDSMAEKMLAGEIKEGDSVIVDVDSDGNVTV 908 >UniRef50_Q4UAC3 ClpB protein, putative n=8 Tax=cellular organisms RepID=Q4UAC3_THEAN Length = 1150 Score = 741 bits (1912), Expect = 0.0, Method: Composition-based stats. Identities = 405/1036 (39%), Positives = 593/1036 (57%), Gaps = 182/1036 (17%) Query: 1 MRLDR---------LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLT 51 M +D T+K A+ +A D+ ++E L+ +L+N + V +L Sbjct: 115 MMMDNGGHVFNSQDYTDKAWEAITSLTEIANEFDSSYVEGDMLLYSLINDDN--VLKVLN 172 Query: 52 SAGINAGQLRTDINQALNRLPQVEGTGGDVQ-PSQDLVRVLNLCDKLAQKRG-------- 102 + G+N L+ ++ L + ++ G+ GD + + L VLN+ + + G Sbjct: 173 NLGLNVDNLKKELENHLKKQIRMSGSFGDRKILGRILENVLNISKRYKSEFGVSSITVLA 232 Query: 103 ---------------DNFISSELFVLAALESR-GTLADILKAAGATTANITQAIEQMRGG 146 D +IS E +L L T + + +RG Sbjct: 233 HTATNPPKGSYIVPLDKYISVEHLLLGLAAEDTKFFRPYLTKYKITLEKLKDTVLSIRGK 292 Query: 147 ESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIG 206 + + E+ + L K++ DLT+ A GKLDPVIGRD EIRRTI++L RRTKNNPVL+G Sbjct: 293 RKITTRNTENSYKLLNKFSKDLTDMARNGKLDPVIGRDNEIRRTIEILSRRTKNNPVLLG 352 Query: 207 EPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDL 266 +PGVGKTAI EGLA RI++G+VP+ LK R+V++LD+ A+VAG YRGEFEERLK +LN++ Sbjct: 353 DPGVGKTAIAEGLANRIVSGDVPDSLKNRKVISLDIAAIVAGTMYRGEFEERLKEILNEI 412 Query: 267 AKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKD 326 +G +++FIDE+HT+VGAG++ G++DAGN+LKP LARGEL C+GATTL EYRQ IEKD Sbjct: 413 ENSQGEIVMFIDEIHTLVGAGESQGSLDAGNILKPMLARGELRCIGATTLQEYRQKIEKD 472 Query: 327 AALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQL 386 ALERRFQ +++ EP++E+TI ILRGLKERYE+HH V+I D ++ A LS+RYI DR L Sbjct: 473 KALERRFQPIYIDEPNIEETINILRGLKERYEVHHGVRILDSTLIQAVLLSNRYITDRYL 532 Query: 387 PDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESD------------ 434 PDKAIDLIDEAA+ +++Q+ SKP +LD ++R+++QL++E+ +++ ++D Sbjct: 533 PDKAIDLIDEAAAKLKIQLSSKPLQLDIIERKLLQLEMEKISIINDNDNIGILSKNEKEN 592 Query: 435 --EASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRV 492 K RL ++ +++ +Q EL E W EK+ + + IK ++ KI I++A R Sbjct: 593 LKPNDKLRLQNIDNLVNELTKQKDELNEMWLKEKSLVDNIRNIKERIDIVKIEIDKAERD 652 Query: 493 GDLARMSELQYGKIPELEKQLEAATQ---------------------------------- 518 DL +EL++ +P+LE QL+ Sbjct: 653 FDLNHAAELRFETLPDLENQLKTNINNYENYIKQVRYGVRSTATNTTNPPEGVLYSSFSY 712 Query: 519 ------LEGKTMRLLRNKVTDAEIAEVLARWT---------------------------- 544 +E LLR+ VT +IA V+++WT Sbjct: 713 ITTYIVMETGGNILLRDTVTKEDIANVVSKWTGVVRGSYILVVGSSVTVVIPFTWILSYR 772 Query: 545 ---------GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPN 595 GIP++++++S++EK+L++ +ELH R+IGQ EA+DAV NA++RSR G+ DP Sbjct: 773 LTKHRNVVIGIPLNKLIKSQKEKILQLNEELHKRIIGQQEAIDAVVNAVQRSRVGMNDPK 832 Query: 596 RPIGSFLFLGPTGVGKTELCKALANFMFDS---------------DEAMVRIDMSEFMEK 640 +PI + +FLGPTGVGKTEL KA+A +FDS +A++R DMSE+MEK Sbjct: 833 KPIAALMFLGPTGVGKTELSKAIAEQLFDSGITLRCLLPRPPTTTKDAIIRFDMSEYMEK 892 Query: 641 HSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEV-------------------EK 681 HSVS+LVGAPPGY+GYE+GG LTEA+RR+PYS++L DE+ Sbjct: 893 HSVSKLVGAPPGYIGYEQGGLLTEAIRRKPYSILLFDEMYLHYGACSSPTGVLSYILKST 952 Query: 682 AHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD-YAHMKEL 740 H DV+NILLQVLDDGRLTD GR V+F N+++I TSNLGS I E + MK Sbjct: 953 THSDVYNILLQVLDDGRLTDSLGRKVNFTNSLIIFTSNLGSQNILELARFPEKRNEMKNK 1012 Query: 741 VLGVVSHNFRPEFINRIDEVVVFHPLG--------------------EQHIASIAQIQLK 780 V+ V NF PEF+NRIDE +VF L ++ + I +++ Sbjct: 1013 VMTSVRQNFSPEFLNRIDEFIVFDSLTKIGTLRCSVTVLGHTVTNTPKRELKKIVNMEMM 1072 Query: 781 RLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVP 840 +L RL E+ ++ I D A+ +++ GYDP YGARPLKR IQ+QIE+P+A ILS + Sbjct: 1073 KLSNRLAEKNIKLSIDDAAMSHIADIGYDPAYGARPLKRTIQKQIESPIAVGILSDQYKE 1132 Query: 841 GKVIRLEVNEDRIVAV 856 + + + ++ + Sbjct: 1133 HDNLHISYKDGKLTIL 1148 >UniRef50_P35100 ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplastic n=354 Tax=cellular organisms RepID=CLPC_PEA Length = 922 Score = 739 bits (1907), Expect = 0.0, Method: Composition-based stats. Identities = 362/874 (41%), Positives = 533/874 (60%), Gaps = 78/874 (8%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 +R T K + AQ A + F+ ++ L+ + G + +L S GIN R Sbjct: 91 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDAR 150 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG- 120 ++ + + R ++ + RVL L + A++ G N+I SE +L L Sbjct: 151 VEVEKIIGRGSGFVAV--EIPFTPRAKRVLELSQEEARQLGHNYIGSEHLLLGLLREGEG 208 Query: 121 TLADILKAAGATTANITQAIEQMRGGE------SVNDQGAEDQRQALKKYTIDLTERAEQ 174 A +L+ GA NI + +M G +V + ++ L++Y +LT+ AE+ Sbjct: 209 VAARVLENLGADPTNIRTQVIRMVGESADSVTATVGSGSSNNKTPTLEEYGTNLTKLAEE 268 Query: 175 GKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKG 234 GKLDPV+GR +I R Q+L RRTKNNP LIGEPGVGKTAI EGLAQRI NG+VPE ++G Sbjct: 269 GKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEG 328 Query: 235 RRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMD 294 ++V+ LDMG LVAG KYRGEFEERLK ++ ++ + + ++ILFIDE+HT++GAG A+GA+D Sbjct: 329 KKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSD-DIILFIDEVHTLIGAGAAEGAID 387 Query: 295 AGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLK 354 A N+LKPALARGEL C+GATTLDEYR++IEKD LERRFQ V V EP+V++TI IL+GL+ Sbjct: 388 AANILKPALARGELQCIGATTLDEYRKHIEKDPDLERRFQPVKVPEPTVDETIQILKGLR 447 Query: 355 ERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDR 414 ERYE+HH ++ TD A++AAA LS++YI+DR LPDKAIDL+DEA S +R+Q PEE Sbjct: 448 ERYEIHHKLRYTDEALIAAAQLSYQYISDRFLPDKAIDLVDEAGSRVRLQHAQLPEEAKE 507 Query: 415 LDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQT 474 LD+ + ++ E++ ++ D L ++ D + Q S L E+ K + + T Sbjct: 508 LDKEVRKIVKEKEEYVRNQDFEKAG---ELRDKEMDLKAQISALIEKGKEMSKAETETAD 564 Query: 475 IKAELEQAKIA-IEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTD 533 + + I I + + ++S + ++ ++E L + + ++ + + Sbjct: 565 EGPIVTEVDIQHIVSSWTGIPVDKVSADESDRLLKMEDTLHKRIIGQDEAVQAISRAIRR 624 Query: 534 AEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLAD 593 +R GL + Sbjct: 625 -----------------------------------------------------ARVGLKN 631 Query: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGY 653 PNRPI SF+F GPTGVGK+EL KALA + F S+EAM+R+DMSEFME+H+VS+L+G+PPGY Sbjct: 632 PNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGY 691 Query: 654 VGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTV 713 VGY EGG LTEAVRRRPY+V+L DE+EKAHPDVFN++LQ+L+DGRLTD +GRTVDF+NT+ Sbjct: 692 VGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTL 751 Query: 714 VIMTSNLGSDLIQERF-----------GELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 762 +IMTSN+GS +I++ + Y +K LV + FRPEF+NR+DE++V Sbjct: 752 LIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIV 811 Query: 763 FHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQ 822 F L + + IA I LK +++RL+ + E+ +++ + + GY+P YGARPL+RAI Sbjct: 812 FRQLTKLEVKEIADIMLKEVFQRLKTKEIELQVTERFRDRVVDEGYNPSYGARPLRRAIM 871 Query: 823 QQIENPLAQQILSGELVPGKVIRLEVNEDRIVAV 856 + +E+ +A+++L+ E+ G + ++V+ D V V Sbjct: 872 RLLEDSMAEKMLAREIKEGDSVIVDVDSDGKVIV 905 >UniRef50_C8NK17 ATP-dependent Clp protease ATP-binding subunit n=21 Tax=Bacteria RepID=C8NK17_COREF Length = 927 Score = 738 bits (1904), Expect = 0.0, Method: Composition-based stats. Identities = 357/891 (40%), Positives = 529/891 (59%), Gaps = 106/891 (11%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 +R T++ + + AQ A ++ +I H++ L+++ G + L S GI+ +R Sbjct: 1 MFERFTDRARRVIVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLDAVR 60 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES-RG 120 ++ + + + T G + + +VL L + + G +I +E +L + G Sbjct: 61 QEVEEIIGHGSK--PTTGHIPFTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGEG 118 Query: 121 TLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQ--------------------- 159 A +L GA + Q + Q+ G G+ D Q Sbjct: 119 VAAQVLVKLGADLPRVRQQVIQLLSGYEGGQGGSPDSPQGGQGGDAVGAGSAPGGRATGS 178 Query: 160 ---------ALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGV 210 L ++ +LT+ A+ GKLDPV+GRD+EI R +QVL RRTKNNPVLIGEPGV Sbjct: 179 GAGERSNSLVLDQFGRNLTQAAKDGKLDPVVGRDKEIERIMQVLSRRTKNNPVLIGEPGV 238 Query: 211 GKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQE 270 GKTA+VEGLA I+NG+VPE LK ++V +LD+G+LVAG++YRG+FEERLK VL ++ ++ Sbjct: 239 GKTAVVEGLALDIVNGKVPETLKDKQVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQR- 297 Query: 271 GNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALE 330 G++ILFIDE+HT+VGAG A+GA+DA ++LKP LARGEL +GATTLDEYR++IEKDAALE Sbjct: 298 GDIILFIDEIHTLVGAGAAEGAIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALE 357 Query: 331 RRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKA 390 RRFQ V V EPSVE +I IL+GL++RYE HH V ITD A+VAAA LS RYI DR LPDKA Sbjct: 358 RRFQPVQVPEPSVELSIEILKGLRDRYEAHHRVSITDGALVAAAQLSDRYINDRFLPDKA 417 Query: 391 IDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSD 450 +DLIDEA + +R++ + PE L +D RI ++ E++A + D ++ L ++ Sbjct: 418 VDLIDEAGARMRIKRMTAPESLREVDERIADVRREKEAAIDAQDF---EKAAGLRDKERK 474 Query: 451 KERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELE 510 + +E E++W++ + I E+ + + +++E + ++ +E Sbjct: 475 LGEERAEKEKQWRS-----GDLEEIAEVGEEQIAEVLATWTGIPVFKLTEAESSRLLNME 529 Query: 511 KQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRV 570 ++L + + ++ + + Sbjct: 530 EELHKRIIGQDEAVKAVSRAIRRT------------------------------------ 553 Query: 571 IGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMV 630 RAGL DP RP GSF+F GP+GVGKTEL KALA F+F D++++ Sbjct: 554 -----------------RAGLKDPKRPSGSFIFAGPSGVGKTELSKALAEFLFGDDDSLI 596 Query: 631 RIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNIL 690 +IDM EF ++ + SRL GAPPGYVGYEEGG LTE VRR+P+SV+L DE+EKAH +++N L Sbjct: 597 QIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTL 656 Query: 691 LQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFG-----------ELDYAHMKE 739 LQVL+DGRLTDGQGR VDF+NTV+I TSNLG+ I + G + Y MK Sbjct: 657 LQVLEDGRLTDGQGRIVDFKNTVLIFTSNLGTQDISKAVGLGFSGSNETDSDAQYDRMKN 716 Query: 740 LVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEA 799 V + +FRPEF+NRIDE+VVFH L + I + ++ + R+ + L ++ I ++D+A Sbjct: 717 KVHDELKKHFRPEFLNRIDEIVVFHQLTREQIIQMVELLIGRVSRALADKDMGIELTDKA 776 Query: 800 LKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNE 850 LL+ G+DPV GARPL+R IQ++IE+ ++++IL GE+ G+++ ++V+ Sbjct: 777 KALLASRGFDPVLGARPLRRTIQREIEDAMSEKILFGEIGAGEIVTVDVDG 827 >UniRef50_B5HY88 Chaperone protein clpB n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5HY88_9ACTO Length = 861 Score = 737 bits (1901), Expect = 0.0, Method: Composition-based stats. Identities = 448/790 (56%), Positives = 577/790 (73%), Gaps = 7/790 (0%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLN-QEGGSVSPLLTSAGINAGQLRTDI 64 LTN+ + A+ A + A+ + + P HL+ ALL Q+ ++ LL + + +R Sbjct: 14 LTNRSRDAINAAGNRAVTEGHPDLTPAHLLLALLQGQDNENIVDLLAAVDADQAAVRAGA 73 Query: 65 NQALNRLPQVEGTGGDVQ-PSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLA 123 +AL LP V G+ P++DL+ V+ A+ GD ++S+E ++ G A Sbjct: 74 EKALGSLPSVAGSTVAPPQPNRDLLAVIADAQSRAKDLGDEYLSTEHLLVGIAAKGGPAA 133 Query: 124 DILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGR 183 ++L GAT + A ++ RGG V E Q +AL+K+ D T A GKLDPVIGR Sbjct: 134 EVLTGQGATPKKLIDAFQKARGGRRVTTADPEGQYKALEKFGTDFTAAARDGKLDPVIGR 193 Query: 184 DEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMG 243 D+EIRR +QVL RRTKNNPVLIGEPGVGKTA+VEGLAQRI+ G+VPE LK +R+++LD+ Sbjct: 194 DQEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPESLKDKRLVSLDLS 253 Query: 244 ALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAG-KADGAMDAGNMLKPA 302 A+VAGAKYRGEFEERLK VL ++ +G +I FIDELHT+VGAG D +MDAGNMLKP Sbjct: 254 AMVAGAKYRGEFEERLKTVLAEIRDSDGQIITFIDELHTVVGAGAGGDSSMDAGNMLKPM 313 Query: 303 LARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHH 362 LARGEL VGATTLDEYR+ IEKD ALERRFQ+V VAEP+VEDTIAILRGLK RYE HH Sbjct: 314 LARGELRMVGATTLDEYRERIEKDPALERRFQQVLVAEPTVEDTIAILRGLKGRYEAHHK 373 Query: 363 VQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQL 422 VQI D A+VAAA LS RYI R LPDKAIDL+DEAAS +RM+IDS P E+D L R + +L Sbjct: 374 VQIADSALVAAAALSDRYITSRFLPDKAIDLVDEAASRLRMEIDSSPLEIDELQRGVDRL 433 Query: 423 KLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQA 482 K+E+ AL+KE+D AS++RL+ L +L+DKE + L W+ EK SL+ +K +L++ Sbjct: 434 KMEELALVKETDPASRERLERLRRDLADKEEELRGLTARWEKEKQSLNRVGELKEKLDEL 493 Query: 483 KIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMR--LLRNKVTDAEIAEVL 540 + E+A+R GD S+L YG+IP LE+ LEAA++ E + + +++ +V +IA+ + Sbjct: 494 RGQAERAQRDGDFDTASKLLYGEIPTLERDLEAASEAEEEVSKDTMVKEEVGADDIADTV 553 Query: 541 ARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGS 600 A WTGIP R++E E +KLLRME+EL R+IGQ EAV AVS+A+RR+RAG+ADP+RP GS Sbjct: 554 AAWTGIPAGRLLEGETQKLLRMEEELGKRLIGQGEAVRAVSDAVRRTRAGIADPDRPTGS 613 Query: 601 FLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG 660 FLFLGPTGVGKTEL KALA+F+FD + AMVRIDMSE+ EKH+VSRLVGAPPGYVGYEEGG Sbjct: 614 FLFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVSRLVGAPPGYVGYEEGG 673 Query: 661 YLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL 720 LTEAVRRRPYSV+LLDEVEKAHP+VF+ILLQVLDDGRLTDGQGRTVDFRN ++++TSNL Sbjct: 674 QLTEAVRRRPYSVVLLDEVEKAHPEVFDILLQVLDDGRLTDGQGRTVDFRNAILVLTSNL 733 Query: 721 GSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLK 780 GS + + KE VL VV +F+PEF+NR+D++VVF L + + IA++Q+ Sbjct: 734 GSQFLVDPI--TSETEKKEQVLEVVRASFKPEFLNRLDDLVVFSALTKDELGRIARLQID 791 Query: 781 RLYKRLEERG 790 RL KRL ER Sbjct: 792 RLAKRLAERR 801 >UniRef50_A8B6K3 ClpB protein n=1 Tax=Giardia lamblia ATCC 50803 RepID=A8B6K3_GIALA Length = 882 Score = 735 bits (1898), Expect = 0.0, Method: Composition-based stats. Identities = 377/876 (43%), Positives = 565/876 (64%), Gaps = 27/876 (3%) Query: 5 RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDI 64 + TN Q + ++ ++ H + + H+ +AL + S + + +R I Sbjct: 6 KYTNDLQKVMTESIRVSQRHGHSLVNQYHIAAALFADDDSISSKAVQKCSGDVSAIRRAI 65 Query: 65 NQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLAD 124 L + P V P+ + ++N A++ D ++S+ AA + A Sbjct: 66 ETGLKKTPSVTPVPDTPSPAGGYLGIINKMSAYAEEGRDEYLSTFHLAKAAAQDTDL-AR 124 Query: 125 ILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRD 184 L+ T+ + IE+M+ G S+N + AED +AL+KY +++ +AE+GK DP+I RD Sbjct: 125 CLREGRVTSNRFVEEIEKMKKGRSMNSEFAEDTCEALEKYCVEMVAKAEEGKYDPLIARD 184 Query: 185 EEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGA 244 E+RR +++L RRTKNNPVL G GVGKTAI+EGLAQRI+ +VP+ ++ R+ ALD+GA Sbjct: 185 NELRRIVEILSRRTKNNPVLTGPAGVGKTAILEGLAQRIVRADVPQNIRNARIYALDLGA 244 Query: 245 LVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALA 304 L+AGA+YRG+FEERLK +L++L K EGN ILFIDE+HT++GAG + G DA N+LKPALA Sbjct: 245 LIAGAQYRGQFEERLKAILDELKKSEGNSILFIDEIHTLIGAGGSKGTSDAANLLKPALA 304 Query: 305 RGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQ 364 RGE+ C+GATT +EYR +I D A ERRF +VFVAEP+VEDTI+ILRGL RY+ HH ++ Sbjct: 305 RGEIRCIGATTTEEYRNHIASDRAFERRFAEVFVAEPNVEDTISILRGLSGRYQSHHQIR 364 Query: 365 ITDPAIVAAATLSHRYIA--DRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQL 422 ITD A+VAAA L++RY+ R PD AIDL+DEA +S+R+ +DS+P +LD L+R+ ++L Sbjct: 365 ITDGALVAAAQLANRYVRAMGRHNPDAAIDLLDEAGASVRVTLDSQPAQLDALNRKKLRL 424 Query: 423 KLEQQALM-----KESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKA 477 ++E++AL + +D + KRL + +E+S+ + Q LEE++ E++S+ IKA Sbjct: 425 QIEEEALRRESEARNADSSISKRLADIIKEISNIDMQIKPLEEQYNRERSSIDKISNIKA 484 Query: 478 ELEQAKIAIEQARRVGDLARMSELQYGKIPE-------LEKQLEAATQLEGKTMRLLRNK 530 + + +E G++++ ++LQYG IPE LEK+ EAA+ +L Sbjct: 485 RITALEDKLEVYTTRGEVSKAADLQYGAIPELRDELRRLEKEQEAASYAHHDEKAMLSAV 544 Query: 531 VTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590 VT+ E+A V+++WTGIPV+++ ++REKLL +EQ + +VIGQ AV AV ++I R+RAG Sbjct: 545 VTEMEVANVVSKWTGIPVNKLTRTDREKLLSLEQTISSKVIGQEPAVKAVCSSILRARAG 604 Query: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAP 650 L+ P +P+GSFLFLG +GVGKT L K +A ++DS ++M+ IDMSE+ E+HSVSRL+GAP Sbjct: 605 LSRPTQPLGSFLFLGSSGVGKTYLAKTIAEELYDSVDSMIHIDMSEYTEQHSVSRLIGAP 664 Query: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFR 710 PGYVGYE+ G LTEAV R+ Y+V+L DE+EKAHP + ILLQ+LD+GRLTDG+G VDF Sbjct: 665 PGYVGYEQAGQLTEAVSRKRYAVVLFDEIEKAHPKILTILLQILDEGRLTDGKGNCVDFT 724 Query: 711 NTVVIMTSNLGSDLI----QERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPL 766 NTV+++TSNLGS + KE V+GVV PE INR+D+++VF+PL Sbjct: 725 NTVIMLTSNLGSRELLQCYHSNVSASQAKQAKEHVIGVVRSTLPPELINRLDDLIVFNPL 784 Query: 767 GEQHIASIAQIQLKRLYKRLE-ERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQI 825 + + I + +L +RL+ E G + + D ++ D VYGARPL+R I+++I Sbjct: 785 TKDALVKIFRSLCGQLEERLQHESGLRLRVDDAVAD-IALRDSDMVYGARPLRRFIEREI 843 Query: 826 ENPLAQQILS------GELVPGKVIRLEVNEDRIVA 855 +A++++ + + + +D I Sbjct: 844 TTAVARKLIEVPSDARSNREKRRCVHVSAKDDGIFV 879 >UniRef50_Q47KW3 ATPase n=56 Tax=root RepID=Q47KW3_THEFY Length = 830 Score = 731 bits (1888), Expect = 0.0, Method: Composition-based stats. Identities = 359/869 (41%), Positives = 518/869 (59%), Gaps = 82/869 (9%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 +R T++ + + AQ A ++ +I H++ L+++ G + L S GI+ +R Sbjct: 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES-RG 120 + + + + + G + + +VL L + A + G N+I +E +L + G Sbjct: 61 QQVEEIIGQG--QQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEG 118 Query: 121 TLADILKAAGATTANITQAIEQMRGGESVNDQ--------GAEDQRQALKKYTIDLTERA 172 A +L GA + Q + Q+ G + A L ++ +LT+ A Sbjct: 119 VAAQVLVKLGADLNRVRQQVIQLLHGYQGKEPQAAGTAAESAPSTSLVLDQFGRNLTQAA 178 Query: 173 EQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGL 232 +GKLDPVIGRD+EI R +QVL RRTKNNPVL+G+PGVGKTA+VEGLAQ+I+ GE+PE L Sbjct: 179 REGKLDPVIGRDKEIERVMQVLSRRTKNNPVLVGDPGVGKTAVVEGLAQKIVKGEIPETL 238 Query: 233 KGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGA 292 K +++ LD+GALVAG++YRG+FEERL+ VL ++ G++ILFIDELHT+VGAG A+GA Sbjct: 239 KDKQLYTLDLGALVAGSRYRGDFEERLRKVLKEIR-SRGDIILFIDELHTLVGAGAAEGA 297 Query: 293 MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRG 352 +DA ++LKP LARGEL +GATTLDEYR+Y+EKDAALERRFQ + V EP++ TI IL+G Sbjct: 298 IDAASILKPMLARGELQTIGATTLDEYRKYLEKDAALERRFQPIQVEEPTISHTIEILKG 357 Query: 353 LKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEEL 412 L++RY EA + + + Sbjct: 358 LRDRY--------------------------------------EAHHRVSITDGALVAAA 379 Query: 413 DRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGT 472 DR I L +A+ + S+ R+ + Sbjct: 380 QLADRYISDRYLPDKAIDLIDEAGSRMRI----------------------RRMTAPPDL 417 Query: 473 QTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVT 532 + ++ + + E A D R + L+ + L+ Q + +V Sbjct: 418 REFDEKIAKVRRDKEAAIDAQDFERAAALR-DEEKRLQAQRAQKEKEWKAGDMDTVAEVN 476 Query: 533 DAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLA 592 + IAEVLA TGIPV R+ E E +LLRME+ELH RVIGQ++A+ A+S AIRR+RAGL Sbjct: 477 EELIAEVLATATGIPVFRLTEEESSRLLRMEEELHKRVIGQDDAIKALSQAIRRTRAGLK 536 Query: 593 DPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPG 652 DP RP GSF+F GP+GVGKTELCKALA F+F ++A++++DMSEFMEKH+VSRL G+PPG Sbjct: 537 DPKRPGGSFIFAGPSGVGKTELCKALAEFLFGDEDALIQLDMSEFMEKHTVSRLFGSPPG 596 Query: 653 YVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNT 712 YVGYEEGG LTE VRR+P+SV+L DE+EKAH D+FN LLQVL++GRLTD QGR VDF+NT Sbjct: 597 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHGDIFNSLLQVLEEGRLTDAQGRNVDFKNT 656 Query: 713 VVIMTSNLGSDLIQERFG---------ELDYAHMKELVLGVVSHNFRPEFINRIDEVVVF 763 +++MT+NLG+ I + + Y MK V + +FRPEF+NR+D+ +VF Sbjct: 657 IIVMTTNLGTRDISKGQPMGFARPDDTQTTYDRMKAKVNEELKQHFRPEFLNRVDDTIVF 716 Query: 764 HPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQ 823 H L ++ I +I + + RL +RL++R I + A K+L+E GYDPV GARPL+R IQ+ Sbjct: 717 HQLTQKEITAIVDLMVARLDERLKDRDMGIEVRPHAKKILAERGYDPVLGARPLRRTIQR 776 Query: 824 QIENPLAQQILSGELVPGKVIRLEVNEDR 852 +IE+ L+++IL GEL G+++ ++ + Sbjct: 777 EIEDALSEKILYGELKSGQIVIVDAEGEG 805 >UniRef50_D0D9L8 Chaperone protein ClpB n=1 Tax=Citreicella sp. SE45 RepID=D0D9L8_9RHOB Length = 864 Score = 730 bits (1883), Expect = 0.0, Method: Composition-based stats. Identities = 434/735 (59%), Positives = 558/735 (75%), Gaps = 2/735 (0%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M L++ T + + + AQ++A+ ++Q + P HL+ AL++ E G S L+T AG ++ Sbjct: 1 MNLEKFTERSRGFIQAAQTIAMRDNHQRLVPEHLLKALMDDEQGLASNLITRAGGQPPRV 60 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG 120 + Q L+++P+V G G V RVL+ +K+A+K GD+F+ E + A + Sbjct: 61 VEVLEQKLSKIPRVSGDAGQVYLDPATARVLDEAEKIAKKAGDSFVPVERILTALAIEKS 120 Query: 121 TLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPV 180 + L+A T + +AI +R G + + AE+ ALKKY DLTE AEQG++DP+ Sbjct: 121 GAKEALEAGNLTPQRLNEAINDLRKGRTADSASAEEGYDALKKYARDLTEAAEQGRIDPI 180 Query: 181 IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL 240 IGRDEEIRR++QVL RRTKNNPVLIGEPGVGKTAI EGLA RII+G+VPE L+ +R++AL Sbjct: 181 IGRDEEIRRSMQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIIDGDVPESLRNKRLMAL 240 Query: 241 DMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLK 300 DMGAL+AGAKYRGEFEERLK +L ++ G +ILFIDE+HT+VGAGK DGAMDA N+LK Sbjct: 241 DMGALIAGAKYRGEFEERLKSILKEIESAAGEIILFIDEMHTLVGAGKTDGAMDASNLLK 300 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELH 360 PALARGELHCVGATTLDEYR+++EKD AL RRFQ V V EP+VEDTI+ILRG+KE+YELH Sbjct: 301 PALARGELHCVGATTLDEYRKHVEKDPALARRFQPVMVQEPTVEDTISILRGIKEKYELH 360 Query: 361 HHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRII 420 H V+I+D A+VAAATLSHRYI DR LPDKAIDL+DEAAS +RM++DSKPEELD+LDR I+ Sbjct: 361 HGVRISDSALVAAATLSHRYITDRFLPDKAIDLMDEAASRLRMEVDSKPEELDQLDRNIL 420 Query: 421 QLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELE 480 Q+++E +AL E D ASK RL+ L +EL+D E + +E+ +W+AE+ L+ + +K +L+ Sbjct: 421 QMQIEVEALKLEDDAASKDRLEKLEKELADLEEKSAEMTAQWQAERDKLASARDLKEQLD 480 Query: 481 QAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVL 540 + + +E A+R G+ A+ ELQYGKIPE+EK+L A EG ++ V +IAEV+ Sbjct: 481 RLRAELEIAKREGNFAKAGELQYGKIPEIEKKLAEAEAAEGDV--MVEEAVRPEQIAEVV 538 Query: 541 ARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGS 600 RWTGIP S+M+E EREKLLRME LH RV+GQN+AV AV+NA+RR+RAGL D NRP+GS Sbjct: 539 ERWTGIPTSKMLEGEREKLLRMEDGLHKRVVGQNQAVKAVANAVRRARAGLNDENRPLGS 598 Query: 601 FLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG 660 FLFLGPTGVGKTEL KA+A F+FD D AMVRIDMSEFMEKHSV+RL+GAPPGYVGY+EGG Sbjct: 599 FLFLGPTGVGKTELTKAVAEFLFDDDSAMVRIDMSEFMEKHSVARLIGAPPGYVGYDEGG 658 Query: 661 YLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL 720 LTEAVRRRPY V+L DEVEKAHPDVFN+LLQVLDDG LTDGQGRTVDF+ T++++TS L Sbjct: 659 VLTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGVLTDGQGRTVDFKQTLIVLTSTL 718 Query: 721 GSDLIQERFGELDYA 735 + G Sbjct: 719 ARSAVAASRGGRQQP 733 >UniRef50_P33416 Heat shock protein 78, mitochondrial n=49 Tax=Dikarya RepID=HSP78_YEAST Length = 811 Score = 722 bits (1863), Expect = 0.0, Method: Composition-based stats. Identities = 374/746 (50%), Positives = 528/746 (70%), Gaps = 11/746 (1%) Query: 120 GTLADILKAAGATTANITQAIEQMRGG----ESVNDQGAEDQRQALKKYTIDLTERAEQG 175 + L +T + + + D + ++ AL+++ +LT+ A G Sbjct: 53 DIKTNALNEVAISTCALKSSYGLPNFKRTYVQMRMDPNQQPEKPALEQFGTNLTKLARDG 112 Query: 176 KLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGR 235 KLDPVIGRDEEI R IQ+L RRTKNNP LIG GVGKTA+++GLAQRI+ GEVP+ LK + Sbjct: 113 KLDPVIGRDEEIARAIQILSRRTKNNPCLIGRAGVGKTALIDGLAQRIVAGEVPDSLKDK 172 Query: 236 RVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDA 295 ++ALD+G+L+AGAKYRGEFEERLK VL ++ K G VI+FIDE+H ++G GK DG+MDA Sbjct: 173 DLVALDLGSLIAGAKYRGEFEERLKKVLEEIDKANGKVIVFIDEVHMLLGLGKTDGSMDA 232 Query: 296 GNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKE 355 N+LKP LARG L C+ ATTLDE+ + IEKD AL RRFQ + + EPSV DTI+ILRGLKE Sbjct: 233 SNILKPKLARG-LRCISATTLDEF-KIIEKDPALSRRFQPILLNEPSVSDTISILRGLKE 290 Query: 356 RYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRL 415 RYE+HH V+ITD A+V+AA LS+RYI DR LPDKAIDL+DEA + +R+Q +SKP+E+ +L Sbjct: 291 RYEVHHGVRITDTALVSAAVLSNRYITDRFLPDKAIDLVDEACAVLRLQHESKPDEIQKL 350 Query: 416 DRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTI 475 DR I+++++E ++L KE+D S +R + L ++L K + + L + W AE+A + + Sbjct: 351 DRAIMKIQIELESLKKETDPVSVERREALEKDLEMKNDELNRLTKIWDAERAEIESIKNA 410 Query: 476 KAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLE-AATQLEGKTMRLLRNKVTDA 534 KA LEQA+I +E+ +R GD + SEL+Y +IP+LEK++ + +G + LL + VT Sbjct: 411 KANLEQARIELEKCQREGDYTKASELRYSRIPDLEKKVALSEKSKDGDKVNLLHDSVTSD 470 Query: 535 EIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADP 594 +I++V+A+ TGIP +M+ ++++LL ME L RV+GQ+EA+ A+S+A+R RAGL Sbjct: 471 DISKVVAKMTGIPTETVMKGDKDRLLYMENSLKERVVGQDEAIAAISDAVRLQRAGLTSE 530 Query: 595 NRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYV 654 RPI SF+FLGPTG GKTEL KALA F+FD + ++R DMSEF EKH+VSRL+GAPPGYV Sbjct: 531 KRPIASFMFLGPTGTGKTELTKALAEFLFDDESNVIRFDMSEFQEKHTVSRLIGAPPGYV 590 Query: 655 GYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVV 714 E GG LTEAVRR+PY+V+L DE EKAHPDV +LLQVLD+G+LTD G VDFRNT++ Sbjct: 591 LSESGGQLTEAVRRKPYAVVLFDEFEKAHPDVSKLLLQVLDEGKLTDSLGHHVDFRNTII 650 Query: 715 IMTSNLGSDLIQERFGELDYAHM----KELVLGVVSHNFRPEFINRIDEVVVFHPLGEQH 770 +MTSN+G D++ D + K V+ + ++ PEFINRID+++VF+ L ++ Sbjct: 651 VMTSNIGQDILLNDTKLGDDGKIDTATKNKVIEAMKRSYPPEFINRIDDILVFNRLSKKV 710 Query: 771 IASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLA 830 + SI I++ + RL E+ +I ++DEA L++ GYD +YGARPL R I +QI N +A Sbjct: 711 LRSIVDIRIAEIQDRLAEKRMKIDLTDEAKDWLTDKGYDQLYGARPLNRLIHRQILNSMA 770 Query: 831 QQILSGELVPGKVIRLEVNEDRIVAV 856 +L G++ G+ +R+ V + ++V + Sbjct: 771 TFLLKGQIRNGETVRVVVKDTKLVVL 796 >UniRef50_C8NYT7 ATP-dependent Clp protease ATP-binding subunit n=6 Tax=Bacteria RepID=C8NYT7_9CORY Length = 967 Score = 720 bits (1859), Expect = 0.0, Method: Composition-based stats. Identities = 353/897 (39%), Positives = 515/897 (57%), Gaps = 112/897 (12%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 +R T++ + + AQ A ++ +I H++ L+ + G + L S GIN +R Sbjct: 1 MFERFTDRARRVIVLAQQEARDLNHNYIGTEHILLGLIQEGEGVAAKALESMGINLDDVR 60 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES-RG 120 ++ + + R + G V + +VL L + + G +I +E +L + G Sbjct: 61 REVEEIIGRG--SQPHTGHVPFTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGEG 118 Query: 121 TLADILKAAGATTANITQAIEQMRGGES-------------------------------- 148 A +L GA + Q + Q+ G Sbjct: 119 VAAQVLIKLGADLPRVRQQVIQLLSGYEGGEGQNPEIAEGQQGGPGLTGAGAGSGSMGGM 178 Query: 149 ----VNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204 +QG L ++ +LT A++GKLDPV+GRD+EI R +QVL RRTKNNPVL Sbjct: 179 GSGRGGNQGERSNSLVLDQFGRNLTAAAKEGKLDPVVGRDKEIERIMQVLSRRTKNNPVL 238 Query: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264 IGEPGVGKTA+VEGLA I NG+VPE LK ++V +LD+G+LVAG++YRG+FEERLK VL Sbjct: 239 IGEPGVGKTAVVEGLALDIANGKVPETLKDKQVYSLDLGSLVAGSRYRGDFEERLKKVLK 298 Query: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324 ++ ++ G++ILFIDE+HT+VGAG A+GA+DA ++LKP LARGEL +GATTLDEYR++IE Sbjct: 299 EINQR-GDIILFIDEIHTLVGAGAAEGAIDAASLLKPKLARGELQTIGATTLDEYRKHIE 357 Query: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384 KDAALERRFQ V V EPSVE+TI IL+GL++RYE HH V TD A+ AAA LS RYI DR Sbjct: 358 KDAALERRFQPVQVDEPSVENTIQILKGLRDRYEAHHRVSYTDDALAAAANLSDRYINDR 417 Query: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444 LPDKA+DL+DEA + +R++ + P+ L +D RI +++ E++A + D L Sbjct: 418 FLPDKAVDLLDEAGARMRIKRMTAPKGLRDVDDRITEVRREKEAAIDAQDFEKAAGLRDT 477 Query: 445 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504 +L ++ + + + I E+ + + +++E + Sbjct: 478 ERKLGEERAEKEKQWRA--------GELEDIAEVGEEQIADVLANWTGIPVFKLTESESS 529 Query: 505 KIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQ 564 ++ +E +L + ++ + + Sbjct: 530 RLLHMEDELHQRIIGQDDAVKAVSRAIRRT------------------------------ 559 Query: 565 ELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFD 624 RAGL DP RP GSF+F GP+GVGKTEL KALA F+F Sbjct: 560 -----------------------RAGLKDPKRPSGSFIFAGPSGVGKTELSKALAEFLFG 596 Query: 625 SDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHP 684 +++++++DM EF ++ + SRL GAPPGYVGYEEGG LTE VRR+P+SV+L DE+EKAH Sbjct: 597 DEDSLIQVDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHK 656 Query: 685 DVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFG-----------ELD 733 +++N LLQVL++G +TDGQGR VDF+NTV+I TSNLG+ I + G + Sbjct: 657 EIYNTLLQVLEEGHVTDGQGRNVDFKNTVLIFTSNLGTSDISKAVGLGFSGASTTDSDAQ 716 Query: 734 YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 793 Y MK+ V + +FRPEF+NRIDE+VVFH L ++ I + ++ RL K LE + I Sbjct: 717 YERMKQKVHDELKKHFRPEFLNRIDEIVVFHQLTQEQIVEMVELLAGRLAKNLETQDMGI 776 Query: 794 HISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNE 850 +S++A LL+ G+DPV GARPL+R IQ++IE+ L+++IL GE+ G++I + V Sbjct: 777 ELSEDAKNLLAARGFDPVLGARPLRRTIQREIEDVLSEKILFGEIGAGEIIEVGVTN 833 >UniRef50_Q4FY62 Serine peptidase, putative n=12 Tax=cellular organisms RepID=Q4FY62_LEIMA Length = 817 Score = 715 bits (1846), Expect = 0.0, Method: Composition-based stats. Identities = 401/707 (56%), Positives = 518/707 (73%), Gaps = 1/707 (0%) Query: 151 DQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGV 210 + A + LKKY DLTE A G+LDP++GR+E IRRTIQV+ RRTKNNPVLIGEPGV Sbjct: 92 NPNAVPPGEFLKKYARDLTEEARTGRLDPIVGREEVIRRTIQVVSRRTKNNPVLIGEPGV 151 Query: 211 GKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQE 270 GKTAIVEGLAQRI+ GEVPE +K R+V ALDMG LVAGAK+RGEFEERLKGVL D + Sbjct: 152 GKTAIVEGLAQRIVKGEVPESIKDRQVYALDMGTLVAGAKFRGEFEERLKGVLKDTIESH 211 Query: 271 GNVILFIDELHTMVGAGKA-DGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAAL 329 G VILFIDELHT+VGAG + DG+MDA N+LKP+LARGELHC+GATTLDEYRQ+IEKDAAL Sbjct: 212 GKVILFIDELHTLVGAGSSGDGSMDAANLLKPSLARGELHCIGATTLDEYRQHIEKDAAL 271 Query: 330 ERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDK 389 RRFQ V V EP+VE+TI+ILRG+KE+YE HH I D A+V AA SHRY+++R+LPDK Sbjct: 272 ARRFQSVLVTEPTVEETISILRGIKEKYEAHHGCLIKDEALVYAAVNSHRYLSERRLPDK 331 Query: 390 AIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELS 449 AIDLIDEAAS +R+Q +SKPE LD ++R +I+LK+E +A+ K+ DE K++L+ L E++S Sbjct: 332 AIDLIDEAASRLRLQQESKPEALDLIERELIRLKIEAEAVKKDKDEVGKEKLENLYEQIS 391 Query: 450 DKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPEL 509 K+++Y LEE WK EK + EL+ + +EQA GD A+ E+Q+ +IP L Sbjct: 392 QKQKEYDALEERWKKEKNLFQTIKQRTEELDVLRHHLEQAMNSGDFAKAGEIQHSQIPNL 451 Query: 510 EKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHR 569 KQ+E L ++ + VT +IAEV+AR TGIPV+++M SEREKL+ M+ EL Sbjct: 452 LKQIEKDKHLASSKNFMVHDSVTSKDIAEVIARATGIPVAQLMTSEREKLIHMDAELKKT 511 Query: 570 VIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAM 629 ++GQ+ A+++++N +R SRAGL RP+GSFLFLGPTGVGKTE+CK+LA F+FD + + Sbjct: 512 IMGQDAAIESITNVVRISRAGLHSHKRPLGSFLFLGPTGVGKTEVCKSLAKFLFDDESFI 571 Query: 630 VRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNI 689 RIDMSE+ME+HSV RL+GAPPGYVGYEEGG LTE+VRRRPY ++L DE EKAHP V NI Sbjct: 572 CRIDMSEYMERHSVHRLIGAPPGYVGYEEGGELTESVRRRPYQIVLFDEFEKAHPSVSNI 631 Query: 690 LLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNF 749 LLQVLD+G LTD GR VDF+NT++I+TSN+G+D+I V+ V Sbjct: 632 LLQVLDEGHLTDSHGRRVDFKNTIIILTSNIGADVIARLPEGKPSISAMPAVMEQVRQRL 691 Query: 750 RPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYD 809 PEFINR+D++++F+ L + I SI +I ++ K L E + S E LS NGY Sbjct: 692 APEFINRLDDIIMFNRLSREDIRSIVEILFAQVQKMLTEHNITLEESTEVYDWLSVNGYS 751 Query: 810 PVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAV 856 VYGARPLKR +Q ++ N LA +L G + G+ +RL V + +V V Sbjct: 752 AVYGARPLKRLVQSELLNQLALMLLDGRVREGEHVRLSVQDGHVVVV 798 >UniRef50_P31539 Heat shock protein 104 n=15 Tax=Eukaryota RepID=HS104_YEAST Length = 908 Score = 714 bits (1843), Expect = 0.0, Method: Composition-based stats. Identities = 369/867 (42%), Positives = 556/867 (64%), Gaps = 22/867 (2%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGS----VSPLLTSAGINA 57 + T + L AQ LA H + ++P+H+++A + + L+ + Sbjct: 3 DQTQFTERALTILTLAQKLASDHQHPQLQPIHILAAFIETPEDGSVPYLQNLIEKGRYDY 62 Query: 58 GQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALE 117 + +N+ L R+PQ + ++ PS L +VL K+ +++ D+FI+ + + A Sbjct: 63 DLFKKVVNRNLVRIPQQQPAPAEITPSYALGKVLQDAAKIQKQQKDSFIAQDHILFALF- 121 Query: 118 SRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQ--ALKKYTIDLTERAEQG 175 + ++ I K A I Q ++RG ++ +GA+ L KY ID+TE+A QG Sbjct: 122 NDSSIQQIFKEAQVDIEAIKQQALELRGNTRIDSRGADTNTPLEYLSKYAIDMTEQARQG 181 Query: 176 KLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGR 235 KLDPVIGR+EEIR TI+VL RR K+NP LIGEPG+GKTAI+EG+AQRII+ +VP L+G Sbjct: 182 KLDPVIGREEEIRSTIRVLARRIKSNPCLIGEPGIGKTAIIEGVAQRIIDDDVPTILQGA 241 Query: 236 RVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDA 295 ++ +LD+ AL AGAKY+G+FEER KGVL ++ + + ++LFIDE+H ++G GK DA Sbjct: 242 KLFSLDLAALTAGAKYKGDFEERFKGVLKEIEESKTLIVLFIDEIHMLMGNGK----DDA 297 Query: 296 GNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKE 355 N+LKPAL+RG+L +GATT +EYR +EKD A ERRFQK+ VAEPSV T+AILRGL+ Sbjct: 298 ANILKPALSRGQLKVIGATTNNEYRSIVEKDGAFERRFQKIEVAEPSVRQTVAILRGLQP 357 Query: 356 RYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRL 415 +YE+HH V+I D A+V AA L+ RY+ R+LPD A+DL+D + + + + DSKPEELD Sbjct: 358 KYEIHHGVRILDSALVTAAQLAKRYLPYRRLPDSALDLVDISCAGVAVARDSKPEELDSK 417 Query: 416 DRRIIQLKLEQQALMKESDEAS--KKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQ 473 +R++ +++E +AL ++ D S K RL + ++ + + + L + + EK Sbjct: 418 ERQLQLIQVEIKALERDEDADSTTKDRLKLARQKEASLQEELEPLRQRYNEEKHGHEELT 477 Query: 474 TIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLE------AATQLEGKTMRLL 527 K +L++ + A R D A ++L+Y IP+++KQ+E A + ++ Sbjct: 478 QAKKKLDELENKALDAERRYDTATAADLRYFAIPDIKKQIEKLEDQVAEEERRAGANSMI 537 Query: 528 RNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRS 587 +N V I+E AR TGIPV ++ ESE EKL+ ME++L V+GQ +A+ AVSNA+R S Sbjct: 538 QNVVDSDTISETAARLTGIPVKKLSESENEKLIHMERDLSSEVVGQMDAIKAVSNAVRLS 597 Query: 588 RAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLV 647 R+GLA+P +P SFLFLG +G GKTEL K +A F+F+ ++ M+R+D SE EK++VS+L+ Sbjct: 598 RSGLANPRQP-ASFLFLGLSGSGKTELAKKVAGFLFNDEDMMIRVDCSELSEKYAVSKLL 656 Query: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTV 707 G GYVGY+EGG+LT ++ +PYSV+L DEVEKAHPDV ++LQ+LDDGR+T GQG+T+ Sbjct: 657 GTTAGYVGYDEGGFLTNQLQYKPYSVLLFDEVEKAHPDVLTVMLQMLDDGRITSGQGKTI 716 Query: 708 DFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLG 767 D N +VIMTSNLG++ I + G K LV+G V +FRPEF+NRI +V+F+ L Sbjct: 717 DCSNCIVIMTSNLGAEFINSQQGSKIQESTKNLVMGAVRQHFRPEFLNRISSIVIFNKLS 776 Query: 768 EQHIASIAQIQLKRLYKRLE--ERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQI 825 + I I I+LK + +R E ++ Y+++++ EA L++ GY GARPL R IQ +I Sbjct: 777 RKAIHKIVDIRLKEIEERFEQNDKHYKLNLTQEAKDFLAKYGYSDDMGARPLNRLIQNEI 836 Query: 826 ENPLAQQILSGELVPGKVIRLEVNEDR 852 N LA +IL E+ + + + + + + Sbjct: 837 LNKLALRILKNEIKDKETVNVVLKKGK 863 >UniRef50_C4R0B7 Oligomeric mitochondrial matrix chaperone n=48 Tax=cellular organisms RepID=C4R0B7_PICPG Length = 824 Score = 713 bits (1839), Expect = 0.0, Method: Composition-based stats. Identities = 386/719 (53%), Positives = 534/719 (74%), Gaps = 10/719 (1%) Query: 145 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204 G + + E++ AL+KY ++LT+ A+ GKLDPVIGRDEEIRRTIQ+L RRTKNNP L Sbjct: 76 GPQINMNGQQEEELPALQKYGVNLTQLAKDGKLDPVIGRDEEIRRTIQILSRRTKNNPAL 135 Query: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264 IG G GKTAI+EGLAQRII GEVPE +K + V+ALD+G+L++GAK+RGEFEERLK VL Sbjct: 136 IGNAGTGKTAIMEGLAQRIIKGEVPESMKDKEVVALDLGSLISGAKFRGEFEERLKAVLK 195 Query: 265 DLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 324 +L + GN+ILFIDELH ++G GKA+G++DA N+LKPALARG+L C GATT++EYR+YIE Sbjct: 196 ELDEAHGNIILFIDELHILLGLGKAEGSIDASNLLKPALARGQLQCCGATTIEEYRKYIE 255 Query: 325 KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADR 384 KDAAL RRFQ V V EPSV+D I+ILRGLKE+YE+HH V+ITD A+V AA S+RYI DR Sbjct: 256 KDAALARRFQSVLVNEPSVQDAISILRGLKEKYEIHHGVRITDSALVTAAVYSNRYITDR 315 Query: 385 QLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDML 444 LPDKAIDL+DEA S++R+Q +SKP+ + +LDR+I+ +++E ++L KE+D S +R D L Sbjct: 316 FLPDKAIDLVDEACSALRLQHESKPDVIQQLDRQIMTIQIELESLRKETDPISVERRDKL 375 Query: 445 NEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504 +E+L K+ + L + W+ EK SL +T K ELEQ+K+ +E+A+R GD + S L+Y Sbjct: 376 DEQLKLKKEELERLTQVWEDEKNSLEKIKTAKEELEQSKLELERAQREGDFGKASMLRYS 435 Query: 505 KIPELEKQLEAATQLEGKTMR-----LLRNKVTDAEIAEVLARWTGIPVSRMMESEREKL 559 KIPELE+++ A Q + LL VT +IA V+++ TG+PV +M+ E++KL Sbjct: 436 KIPELEQKVSATAQRVKEGESETTTNLLHESVTSDDIAWVVSKMTGVPVQSLMKGEKDKL 495 Query: 560 LRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALA 619 L ME+ + RVIGQ+EA+ +V++A+R RAGL + RPI SF+FLGPTG GKTEL K+LA Sbjct: 496 LYMEESIKSRVIGQDEAIHSVADAVRLQRAGLTNEKRPIASFMFLGPTGTGKTELTKSLA 555 Query: 620 NFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEV 679 F+F+ + A+VR DMSEF E+HS+SRL+GAPP YVG+EEGG LTEAVRR+PY+V+L DE Sbjct: 556 EFLFNDENAVVRFDMSEFQERHSLSRLIGAPPSYVGFEEGGELTEAVRRKPYAVVLFDEF 615 Query: 680 EKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLI-----QERFGELDY 734 EKAH D+ ++LQ+LD+G LTD QG +DF+NT++IMTSNLG DL+ E G Sbjct: 616 EKAHRDISKLMLQILDEGNLTDSQGHKIDFKNTIIIMTSNLGQDLLLADTELENVGGKVS 675 Query: 735 AHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIH 794 K V+ V+ N+ PEFINR+D+V+VF+ L + + I I+L + RL +R E+ Sbjct: 676 EKTKNEVIQVMKQNYPPEFINRLDDVLVFNRLSRESLRKIVDIRLSEVQDRLVDRRIELK 735 Query: 795 ISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRI 853 ++D A + L+E GYDP+YGARPL R I++Q+ NPL+ +++ GE+ +++++ + + Sbjct: 736 LTDAAKEWLTEKGYDPLYGARPLNRVIKKQLLNPLSIRLIQGEITNNSTVKVDLVDGDL 794 >UniRef50_Q8DTC7 Chaperone protein clpB n=2 Tax=Streptococcus mutans RepID=CLPB_STRMU Length = 860 Score = 709 bits (1830), Expect = 0.0, Method: Composition-based stats. Identities = 355/862 (41%), Positives = 541/862 (62%), Gaps = 13/862 (1%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 +D++T + +L +A+ LA+ H N ++ H + A+L + S IN QL Sbjct: 1 MIDKMTQLVEDSLEEAKELAIAHRNYQLDIPH-LWAVLVKPDQFAFQFYQSLEINTNQLI 59 Query: 62 TDINQALNRLPQVEGTGGDVQ---PSQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL-E 117 IN+ ++++P + T SQ L +L+ + D ++ E +LA + Sbjct: 60 EIINKEIDKIPVLSSTEKSSYARLYSQRLKNLLDDAHQEMIDLKDQVLTVEHLILALFNQ 119 Query: 118 SRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKL 177 R + L G + Q + ++R G+ E AL+KY ++L +RA + Sbjct: 120 QRNPITVFLLEQGLNKEKLYQKMHRIRKGKPAISSSQETIYDALEKYAVNLNQRALDEPV 179 Query: 178 DPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRV 237 + +IGR +E+ I++L R+ KNN VL+G GVGKTAI+EG QR++ +VP+ L+G+ + Sbjct: 180 NKIIGRQDEMNDIIRILSRKNKNNAVLVGHSGVGKTAIIEGFVQRLVKNQVPKNLQGKVI 239 Query: 238 LALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGN 297 +LD+GAL+AG KYRGEFEER K +LND+ G +ILFIDE+H++V AG+ +G++DA + Sbjct: 240 YSLDIGALLAGTKYRGEFEERFKALLNDIIDSNGQIILFIDEIHSIVSAGRTEGSVDAAS 299 Query: 298 MLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERY 357 +LKP LARG++ +G+TT EYR+ IE D ALERRFQ++ V EP ++ T+ IL+GLK Y Sbjct: 300 ILKPLLARGKIRIIGSTTHAEYRESIEYDRALERRFQRILVHEPDLDYTMEILKGLKPIY 359 Query: 358 ELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDR 417 E H V++ + + AAA+LS RYI+DR LPDKA+DLIDEA ++ R+ + P ++ L + Sbjct: 360 ENFHGVRLEEDGLEAAASLSKRYISDRFLPDKALDLIDEACAAKRLASHAYPVQMTNLSQ 419 Query: 418 RIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKA 477 ++I K+ L ++ LN L E Q S+L W+ E+ L Q +++ Sbjct: 420 QLISEKIRLLRL----TDSDTDDKFKLNNHLEQLEEQKSQLLANWQRERELLDQVQELRS 475 Query: 478 ELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIA 537 L + A +A L+ +I + +++ A + + +++ VT +IA Sbjct: 476 HLTALEEQANLALENNQVADYVRLEDEEIRKCHQKMTALEKERLDSQKIINVTVTREDIA 535 Query: 538 EVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRP 597 V+ R TGI V +ME+ER++LL +E+ LH +++GQ++AV VS AI RSRAG+ +P RP Sbjct: 536 AVVERLTGIKVQGVMENERDRLLHLEELLHQKIVGQDQAVQKVSQAIIRSRAGIQNPKRP 595 Query: 598 IGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYE 657 IGSFLFLGPTGVGKT L K LA +F S+ MVR+DMSE+MEKH+VSRLVG PPGYVGYE Sbjct: 596 IGSFLFLGPTGVGKTALAKRLAEVLFGSELEMVRLDMSEYMEKHAVSRLVGPPPGYVGYE 655 Query: 658 EGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMT 717 EGG LTEAVR+R YS++LLDE+EKAHPDVFN LLQVLD+GRLTD +GRT+DF+NT++IMT Sbjct: 656 EGGQLTEAVRQRLYSIVLLDEIEKAHPDVFNTLLQVLDEGRLTDSKGRTIDFKNTILIMT 715 Query: 718 SNLGSDLIQERFGELD--YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIA 775 SN+GS I + + + ++ VL ++H+FRPEF+NRIDE V+F+ L E+ + + Sbjct: 716 SNIGSTNILQSLQDSGCITSEVRYKVLDELNHSFRPEFLNRIDETVLFNALSEKDMTGVV 775 Query: 776 QIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILS 835 ++ + L RL E+ + +++ LL++ G+D +GARP++R I Q++ENPLA ++ Sbjct: 776 KVMVSDLQARLLEQDIHLTLTESVYILLAKEGFDAAFGARPMQRTIMQKLENPLALYLIQ 835 Query: 836 GELVPGKV--IRLEVNEDRIVA 855 + K + + V + ++ Sbjct: 836 NQKNKEKETFVTVSVKDKKLKF 857 >UniRef50_O78410 ATP-dependent Clp protease ATP-binding subunit clpA homolog n=45 Tax=root RepID=CLPC_GUITH Length = 819 Score = 705 bits (1820), Expect = 0.0, Method: Composition-based stats. Identities = 349/855 (40%), Positives = 513/855 (60%), Gaps = 79/855 (9%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 +R T K + AQ A + F+ ++ L+ + G + +L S G+N R Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGVNLKDAR 60 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES-RG 120 ++ + + R ++ + RVL L + A++ G N+I +E +L + G Sbjct: 61 VEVEKIIGRGSGFVAV--EIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEG 118 Query: 121 TLADILKAAGATTANITQAIEQMRGGE---SVNDQGAEDQRQALKKYTIDLTERAEQGKL 177 A +L+ + + ++ G S + + + L+++ +LT++A +GKL Sbjct: 119 VAARVLENLALDLTKVRTQVIRLLGDTAEVSATNGQTKGKTPTLEEFGSNLTQKAAEGKL 178 Query: 178 DPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRV 237 DPVIGR +EI R IQ+L RRTKNNP+LIGEPGVGKTAI EGLAQRI N +VP+ L+ +RV Sbjct: 179 DPVIGRQKEIERVIQILGRRTKNNPILIGEPGVGKTAIAEGLAQRINNRDVPDILEDKRV 238 Query: 238 LALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGN 297 + LD+G LVAG KYRGEFEERLK +++++ NVIL IDE+HT++GAG A+GA+DA N Sbjct: 239 VTLDIGLLVAGTKYRGEFEERLKKIIDEIRVAN-NVILVIDEVHTLIGAGAAEGAIDAAN 297 Query: 298 MLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERY 357 +LKPALARGE+ C+GATTL+EYR++IEKD+ALERRFQ V V EPSVE+TI IL GL++RY Sbjct: 298 ILKPALARGEMQCIGATTLEEYRKHIEKDSALERRFQPVMVGEPSVEETIEILYGLRDRY 357 Query: 358 ELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDR 417 E HH + I+D A+ AAA + +YIADR LPDKAIDLIDEA S +R+ P LD+ Sbjct: 358 EKHHKLVISDEALSAAAKFADQYIADRFLPDKAIDLIDEAGSRVRLMNSQLPPAARELDK 417 Query: 418 RIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEW-KAEKASLSGTQTIK 476 E + ++K+ DEA + + +L D+E + ++K T+ + Sbjct: 418 -------ELREILKQKDEAVRSQDFETAGQLRDREMEIKAQIAAIAHSKKGDEENTKEVS 470 Query: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 536 E+ I A + +M+ + K+ ++E+ L + + + + + Sbjct: 471 VVTEEDIAQIVAAWTGIPVNKMTRSESEKLLQMEETLHGRIIGQDEAVVAVSKAIRR--- 527 Query: 537 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNR 596 +R GL +PNR Sbjct: 528 --------------------------------------------------ARVGLKNPNR 537 Query: 597 PIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGY 656 PI SF+F GPTGVGKTEL KALA++ F S+EAMVR+DMSE+ME+H+VS+L+G+PPGYVGY Sbjct: 538 PIASFIFSGPTGVGKTELTKALASYFFGSEEAMVRLDMSEYMERHTVSKLIGSPPGYVGY 597 Query: 657 EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 716 EGG LTE+VRRRPY+V+L DE+EK HPDVFN+LLQ+L+DGRLTD +GRTVDF+NT++I+ Sbjct: 598 NEGGQLTESVRRRPYTVVLFDEIEKGHPDVFNLLLQILEDGRLTDSKGRTVDFKNTLLIL 657 Query: 717 TSNLGSDLIQERFG-----------ELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHP 765 TSN+GS +I++ G E Y +K LV + FRPEF+NR+DE++VF Sbjct: 658 TSNVGSKVIEKGGGGLGFDLSEDQTESQYGRIKALVNEELKQYFRPEFLNRLDEIIVFRQ 717 Query: 766 LGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQI 825 L + + IA+I LK ++ R+ E+G ++ ++ L GY+P+YGARPL+RA+ + + Sbjct: 718 LTKDEVGEIAEIMLKEVFTRISEKGIQLEVTARFKTHLINEGYNPIYGARPLRRAVMRLL 777 Query: 826 ENPLAQQILSGELVP 840 E+ L+++ L+ ++ Sbjct: 778 EDTLSEEFLAEKIKE 792 >UniRef50_P42762 ERD1 protein, chloroplastic n=22 Tax=cellular organisms RepID=ERD1_ARATH Length = 945 Score = 702 bits (1811), Expect = 0.0, Method: Composition-based stats. Identities = 334/902 (37%), Positives = 489/902 (54%), Gaps = 110/902 (12%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +R T + A+ +Q A + HL+ L+ ++ +GI + R Sbjct: 80 FERFTERAIRAIIFSQKEAKSLGKDMVYTQHLLLGLIAEDRDP--QGFLGSGITIDKARE 137 Query: 63 DI----------NQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFV 112 + ++ D+ S RV + ++ +I+ E Sbjct: 138 AVWSIWDEANSDSKQEEASSTSYSKSTDMPFSISTKRVFEAAVEYSRTMDCQYIAPEHIA 197 Query: 113 LAALE-SRGTLADILKAAGATTANITQAIEQMRGGESVND-------------------- 151 + G+ +LK GA +T A GE D Sbjct: 198 VGLFTVDDGSAGRVLKRLGANMNLLTAAALTRLKGEIAKDGREPSSSSKGSFESPPSGRI 257 Query: 152 ----QGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGE 207 G + + L+++ +DLT RA +G +DPVIGR++E++R IQ+L RRTKNNP+L+GE Sbjct: 258 AGSGPGGKKAKNVLEQFCVDLTARASEGLIDPVIGREKEVQRVIQILCRRTKNNPILLGE 317 Query: 208 PGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLA 267 GVGKTAI EGLA I P L +R+++LD+G L+AGAK RGE E R+ +++++ Sbjct: 318 AGVGKTAIAEGLAISIAEASAPGFLLTKRIMSLDIGLLMAGAKERGELEARVTALISEVK 377 Query: 268 KQEGNVILFIDELHTMVGAG-----KADGAMDAGNMLKPALARGELHCVGATTLDEYRQY 322 K G VILFIDE+HT++G+G +D N+LKP+L RGEL C+ +TTLDE+R Sbjct: 378 KS-GKVILFIDEVHTLIGSGTVGRGNKGSGLDIANLLKPSLGRGELQCIASTTLDEFRSQ 436 Query: 323 IEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIA 382 EKD AL RRFQ V + EPS ED + IL GL+E+YE HH+ + T AI AA LS RYIA Sbjct: 437 FEKDKALARRFQPVLINEPSEEDAVKILLGLREKYEAHHNCKYTMEAIDAAVYLSSRYIA 496 Query: 383 DRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLD 442 DR LPDKAIDLIDEA S R++ K +E Sbjct: 497 DRFLPDKAIDLIDEAGSRARIEAFRKKKE------------------------------- 525 Query: 443 MLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQ 502 + + + ++ +E K +A + + + + +++ + + + + Sbjct: 526 ---DAICILSKPPNDYWQEIKTVQAMHEVVLSSRQKQDDGDAISDESGELVEESSLPPAA 582 Query: 503 YGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRM 562 P L V +IA V + W+GIPV ++ ER L+ + Sbjct: 583 GDDEPIL---------------------VGPDDIAAVASVWSGIPVQQITADERMLLMSL 621 Query: 563 EQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFM 622 E +L RV+GQ+EAV A+S A++RSR GL DP+RPI + LF GPTGVGKTEL KALA Sbjct: 622 EDQLRGRVVGQDEAVAAISRAVKRSRVGLKDPDRPIAAMLFCGPTGVGKTELTKALAANY 681 Query: 623 FDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKA 682 F S+E+M+R+DMSE+ME+H+VS+L+G+PPGYVG+EEGG LTEA+RRRP++V+L DE+EKA Sbjct: 682 FGSEESMLRLDMSEYMERHTVSKLIGSPPGYVGFEEGGMLTEAIRRRPFTVVLFDEIEKA 741 Query: 683 HPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGE----------- 731 HPD+FNILLQ+ +DG LTD QGR V F+N ++IMTSN+GS I + Sbjct: 742 HPDIFNILLQLFEDGHLTDSQGRRVSFKNALIIMTSNVGSLAIAKGRHGSIGFILDDDEE 801 Query: 732 -LDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERG 790 Y MK LV+ + + FRPE +NRIDE+V+F L + + I + L+ L RL G Sbjct: 802 AASYTGMKALVVEELKNYFRPELLNRIDEIVIFRQLEKAQMMEILNLMLQDLKSRLVALG 861 Query: 791 YEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNE 850 + +S+ +L+ + GYDP YGARPL+R + + +E+PL++ L+G PG + +++ Sbjct: 862 VGLEVSEPVKELICKQGYDPAYGARPLRRTVTEIVEDPLSEAFLAGSFKPGDTAFVVLDD 921 Query: 851 DR 852 Sbjct: 922 TG 923 >UniRef50_B5Y8V8 Negative regulator of genetic competence ClpC/mecB n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y8V8_COPPD Length = 805 Score = 700 bits (1806), Expect = 0.0, Method: Composition-based stats. Identities = 362/862 (41%), Positives = 520/862 (60%), Gaps = 72/862 (8%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 R + + + AL DAQ A ++ F+ HL+ A+LN++ ++ S G +A +R Sbjct: 1 MFIRFSEEARKALKDAQEEARRLNSSFVGREHLVLAMLNEDT-RAYSIIDSLGADADNIR 59 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGT 121 + I + + + S + R+L++ + A+K +++ +E +LA L+ Sbjct: 60 SSIEDI---PMPMASSLQYPELSSEARRLLDIASEEARKLAHSYVGTEHLLLAILKEPSR 116 Query: 122 LADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVI 181 ++ IL G ++ + + +M GE ++ + + L K++ DL AE+GKLDPVI Sbjct: 117 VSSILNENGVFYDDVRKKVIEM--GEQEPEEKGKTKTPVLDKFSKDLVSLAEKGKLDPVI 174 Query: 182 GRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALD 241 GR+ E+ R I++L RR KNNP+L+GEPGVGKTAIVEGLA+RI +G+VP LK +RV+ LD Sbjct: 175 GRETELNRIIEILSRRIKNNPILLGEPGVGKTAIVEGLAERIASGKVPYSLKKKRVVQLD 234 Query: 242 MGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKP 301 + ++VAG KYRGEFEER+K +L+++ + G VILFIDE+HT++GAG A+GA+DA ++LKP Sbjct: 235 ISSIVAGTKYRGEFEERMKKILDEVKRTNGQVILFIDEIHTVIGAGAAEGAIDAASILKP 294 Query: 302 ALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHH 361 +LARGE+ +GATT D+YR+YIE+D A ERRFQ V V EPS+E+T IL GL+ YE H Sbjct: 295 SLARGEIKVIGATTYDDYRKYIERDPAFERRFQPVQVEEPSLEETKQILIGLRPIYEKFH 354 Query: 362 HVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQ 421 +V+I D AI AAA L+ +Y+ R LPDKAID +DE + +R+ + P L L I Sbjct: 355 NVKIADDAIEAAAILTKKYVKQRFLPDKAIDALDETCAKVRLANEVLPSNLRALLDEIEN 414 Query: 422 LKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQ 481 ++L++Q ++ + ++ + E+ K E + + L + Sbjct: 415 VRLQKQLA--------------IDSQQFEEAAALRDKEKALKEEYSRMEEI-----WLYE 455 Query: 482 AKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLA 541 + Q D + + IP + +L+ +L L R V Sbjct: 456 RSMDENQPTVSFDDVAYTISSWTGIPVAKLRLDDKKKLLEIEDYLHRRIV---------- 505 Query: 542 RWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSF 601 GQNEAV AV+ AIRRSR GL D RPIG F Sbjct: 506 ------------------------------GQNEAVTAVAKAIRRSRTGLQDDRRPIGVF 535 Query: 602 LFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGY 661 LFLGPTGVGKTEL +ALA FMF +EA++RIDMSE+MEK +VSRLVGAPPGYVGYEEGG Sbjct: 536 LFLGPTGVGKTELARALAEFMFGEEEALIRIDMSEYMEKFNVSRLVGAPPGYVGYEEGGQ 595 Query: 662 LTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLG 721 LTEAVRR+P+S++LLDE+EKAHPDVF+ILLQ+ +DGRLTDGQGR VDFRNT++IMTSNLG Sbjct: 596 LTEAVRRKPHSIVLLDEIEKAHPDVFDILLQIFEDGRLTDGQGRVVDFRNTIIIMTSNLG 655 Query: 722 SDLIQERF------GELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIA 775 S I ++ + +M+ LV+ V F+PEF+NRIDE+VVFH L + I Sbjct: 656 SRDISAGTTIGFLKDQVKFENMENLVMDAVKKFFKPEFLNRIDEIVVFHHLTNDDLRQIV 715 Query: 776 QIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILS 835 I + L K+L + + ISD L + GY+P +GARPL+RAIQ+ +++PLA+ +L Sbjct: 716 GIMMDELNKQLRSQNLTVKISDRMLDQIITEGYEPRFGARPLRRAIQRLVKDPLAEYMLK 775 Query: 836 GELVPGKVIRLEVNEDRIVAVQ 857 E + G + ++ + I + Sbjct: 776 HENISG-TLFMDFVDGEITINK 796 >UniRef50_Q7U3T3 Chaperone protein clpB 2 n=10 Tax=cellular organisms RepID=CLPB2_SYNPX Length = 900 Score = 700 bits (1806), Expect = 0.0, Method: Composition-based stats. Identities = 400/886 (45%), Positives = 555/886 (62%), Gaps = 46/886 (5%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 DR ++ L Q +A + ++ HL+ L + S + + + L Sbjct: 14 EPDRFSDPAWELLLAGQDMARRWRHDQLDVEHLIQVLFSD--SSFRRWVEPLPLRSDDLL 71 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGT 121 + L P G + +DL ++L D++ + GD I ++A Sbjct: 72 DRLEDVLADQPPARG--DQLFIGEDLEQLLETADQVRGRWGDRSIDVPQLIVAVGADPRI 129 Query: 122 LADILKAAGATTANITQ------------------------------AIEQMRGGESVND 151 A++ A G + ++ E Sbjct: 130 GAELFAAQGLAVDRLESLLRQPSVSPAPAPPPVPTAASAPAPTPRSAPAPRVMAPEPEPM 189 Query: 152 QGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVG 211 E + AL+ Y DLTE AE G LDPVIGRD EIR I+VL RR+KNNPVLIGEPGVG Sbjct: 190 VELEREPSALEAYGRDLTEEAEAGSLDPVIGRDSEIRNLIKVLSRRSKNNPVLIGEPGVG 249 Query: 212 KTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEG 271 KTAI E LAQRI+ GEVP+ L+G R++ALD+GAL+AGAK+RG+FEERL+ VL ++++ + Sbjct: 250 KTAIAELLAQRIVAGEVPDSLQGLRLIALDLGALIAGAKFRGQFEERLRSVLEEVSRSDS 309 Query: 272 NVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALER 331 V+LFIDELHT+VG+ ++ + DAG++LKPALARG+L C+GATT +EYR+ +EKD AL R Sbjct: 310 GVVLFIDELHTVVGSDRS--STDAGSLLKPALARGDLRCIGATTPEEYRRTVEKDPALNR 367 Query: 332 RFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAI 391 RFQ+V + EP +E ++ ILRGL+ERYELHH V ITD AI A L+ RYI+DR LPDKAI Sbjct: 368 RFQQVLIREPDLELSLEILRGLRERYELHHGVTITDEAIQTANRLADRYISDRCLPDKAI 427 Query: 392 DLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDK 451 DLIDEAA+ +++++ SKP+ ++ + + +++L + ++EA ++ L + + Sbjct: 428 DLIDEAAAQLKIEVTSKPQVVEEAEADLRRVELA----LLAAEEAPEEERIQLQRQRLEV 483 Query: 452 ERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEK 511 + +L W+ E+ L + + E + AI +A R G L + LQY ++ +++ Sbjct: 484 SSRLDDLRRRWQEERTQLEELGQLLQQDEDLRHAIAEAEREGALEEAARLQYDQLHTVQQ 543 Query: 512 QLEAATQLEGKTMR----LLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELH 567 + EA + + LLR +V +IA+++ARWTGIPV R++ ER KLL +E L Sbjct: 544 RREALEASQAEAQSAGTALLREQVEAGDIADLVARWTGIPVQRLLAGERRKLLALESHLS 603 Query: 568 HRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDE 627 RVIGQ EAV AV+ AIRR+RAG+ DP RP+GSFLFLGPTGVGKTEL KALA +FD +E Sbjct: 604 ERVIGQVEAVAAVAAAIRRARAGMKDPRRPVGSFLFLGPTGVGKTELAKALATSLFDEEE 663 Query: 628 AMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVF 687 A+VR+DMSEFME+++ +RL+GAPPGYVGYEEGG LTEAVRRRPY+V+LLDEVEKAHPDVF Sbjct: 664 ALVRLDMSEFMERNASARLIGAPPGYVGYEEGGQLTEAVRRRPYAVLLLDEVEKAHPDVF 723 Query: 688 NILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE--RFGELDYAHMKELVLGVV 745 N+LLQVLDDGRLTD QG TVDFR+TVV+MTSNL S +I E R G D A +++ V + Sbjct: 724 NLLLQVLDDGRLTDSQGLTVDFRHTVVVMTSNLASPVILEHARSGSSDDAQLQQQVDAAL 783 Query: 746 SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSE 805 S FRPEF+NRIDEV+ F PL + + I ++QL L + E+G + + D L+ Sbjct: 784 SSQFRPEFLNRIDEVIRFRPLKVKDLVRIVRLQLADLSTLMAEQGLSLEVDDAVADSLAR 843 Query: 806 NGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNED 851 G++P YGARPL+R +++Q+ENPLA Q+L IR+ D Sbjct: 844 QGHEPEYGARPLRRVLRRQLENPLATQLLEERFRSAHGIRVRCGTD 889 >UniRef50_B7VTU3 Chaperone ClpB n=1 Tax=Vibrio splendidus LGP32 RepID=B7VTU3_VIBSL Length = 897 Score = 698 bits (1800), Expect = 0.0, Method: Composition-based stats. Identities = 317/884 (35%), Positives = 483/884 (54%), Gaps = 37/884 (4%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 + RL ++AL DA +LA+ ++ H + +LL + LL+ + LR Sbjct: 10 IQRLHPIVKVALEDAAALAVSEKANEVQIEHYLLSLLERPNSDFDILLSHFDCSETILRQ 69 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQ-KRGDNFISSELFVLAALESR-- 119 I LN G G S L+ L ++ + I S +L + + Sbjct: 70 SIRSTLNTN--TTGNGSKPVFSSLLIEWLQESWLVSSLDLSETQIRSGALLLTLVSNPLR 127 Query: 120 ---GTLADILKAAGATTANI----TQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERA 172 A IL+ T + A + AL K+T D T +A Sbjct: 128 YGQHGYASILEGVNPDTLKRNFSELTTNSLESLATTSEKTDAREDGSALSKFTTDFTGKA 187 Query: 173 EQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGL 232 +G++DPV RD+EIR+ I +L RR KNNP+ +GEPGVGKTA+VEGLA +I G+VP+ L Sbjct: 188 RKGEIDPVFCRDQEIRQIIDILARRRKNNPIAVGEPGVGKTAVVEGLALKITEGDVPDCL 247 Query: 233 KGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGA 292 KG + LDMG L AGA +GEFE+RL VL+++ +ILFIDE HT+VG G G Sbjct: 248 KGVELYGLDMGLLQAGASVKGEFEKRLNAVLDEVKNSPTPIILFIDEAHTLVGGGNQAGG 307 Query: 293 MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRG 352 DA N+LKPALARGE+ + ATT EY++Y EKD AL RRFQ V + EPS I+RG Sbjct: 308 SDAANLLKPALARGEVKTIAATTWSEYKKYFEKDPALARRFQLVKLDEPSASQAALIIRG 367 Query: 353 LKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEEL 412 L+ YE H+V + D AI AAA L+ RYI RQLPDKAID++D A + + + +++ P + Sbjct: 368 LRPAYEKSHNVYVRDDAITAAANLADRYITGRQLPDKAIDVLDTACARVNISLNATPAPV 427 Query: 413 DRLDRRIIQLKLEQQALMKES-----DEASKKRLDMLNEELSDKERQYSELEEEWKAEKA 467 + L + I E +AL ++ D+ S + L E++ + + L+ +WK E++ Sbjct: 428 ETLHQEIAAANRELEALERDQLQQTGDKHSAALIPELKEKIEKATEEQATLQVQWKKEQS 487 Query: 468 SLSGTQTIKAELEQAK---IAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKT- 523 + +++ L + A + + + + P + E T+ ++ Sbjct: 488 LIQEIIELRSHLYSLTTPSTEEDSAPKADNTIQDDDALTSDKPNCHEYSEEQTREAIQSC 547 Query: 524 ----------MRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQ 573 L+ +V EI+ V++ WTGIP+ +M++ E + L ++Q L + GQ Sbjct: 548 NERLDNVRGTNPLVHYEVGPDEISHVISDWTGIPMGKMLQDESQATLNLKQNLIQNIKGQ 607 Query: 574 NEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRID 633 A+DA++ I+ ++AGL +P+ P G FL +GP+GVGKTE +A+A+ MF + M I+ Sbjct: 608 EFAIDALAEGIQTAKAGLGNPDAPTGVFLLVGPSGVGKTETARAIADQMFGGERFMTTIN 667 Query: 634 MSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQV 693 MSEF EKH+VSRL+G+PPGYVG+ EGG LTEAVR+RPYSV+LLDEVEKA P+V N+ QV Sbjct: 668 MSEFQEKHTVSRLIGSPPGYVGFGEGGMLTEAVRQRPYSVVLLDEVEKADPEVLNLFYQV 727 Query: 694 LDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE---RFGELDYAHMKELVLGVVSHNFR 750 D G L DG+GRT+DF+NT++IMTSNL + I+ + ++D + E + ++ +F+ Sbjct: 728 FDKGTLNDGEGRTIDFKNTLIIMTSNLATHEIESLVHQAKDIDANIVAEAIRPTLNQHFK 787 Query: 751 PEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERG-YEIHISDEALKLLSENGYD 809 P + R+ V+ F PL + + I +LK++ +RL+ + D ++ + N Sbjct: 788 PALLARM-SVLPFLPLSDAAMTDIIHHKLKKVSERLQSHHKLALCYGDNLVEFVLGNCRL 846 Query: 810 PVYGARPLKRAIQQQIENPLAQQILSGELVPGKV-IRLEVNEDR 852 GAR + I +Q+ L+ Q+L + I + V+E Sbjct: 847 AETGARNIDAVINRQLLPQLSTQLLVNDKDDSHTQIEVSVDEQG 890 >UniRef50_Q1WVA6 Negative regulator of genetic competence n=19 Tax=Bacteria RepID=Q1WVA6_LACS1 Length = 830 Score = 695 bits (1793), Expect = 0.0, Method: Composition-based stats. Identities = 342/876 (39%), Positives = 508/876 (57%), Gaps = 83/876 (9%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 +R T + L AQ A +Q I HL+ AL ++ G + +L S + +R Sbjct: 3 MEERYTPSAKQVLVLAQQQANYFKHQAIGTEHLLLALTMEKNGVAAKVLQSFVVTEVDVR 62 Query: 62 TDINQALN-RLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG 120 +I + Q G + S VL + A+ + +E +LA LE Sbjct: 63 EEIEHIVGYGNLQRRGADTYLPYSPRTRYVLERAREHAKLFNVEKVGTEHILLALLEDDK 122 Query: 121 TLA-DILKAAGATTANIT-----------QAIEQMRGGESVNDQGAEDQRQALKKYTIDL 168 T++ IL A + + R +++++ ++ L + DL Sbjct: 123 TISSRILAALNIDLRKVKNITYRTMGVDATTANRTRKKLALSEKKQDNGTPTLDELARDL 182 Query: 169 TERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEV 228 TE + ++DPV+GRD EI+R +Q+L RRTKNNPVL+GEPGVGKTA+ EG +Q+I+NGEV Sbjct: 183 TEMVRKDQIDPVVGRDNEIKRVVQILSRRTKNNPVLLGEPGVGKTAVAEGFSQKIVNGEV 242 Query: 229 PEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGK 288 P+ LK +RV+ LDMG+LVAG KYRGEFE+RLK ++ ++ + +GNVILFIDE+HT++GAG Sbjct: 243 PDNLKNKRVMMLDMGSLVAGTKYRGEFEDRLKKIIEEIRE-DGNVILFIDEMHTLIGAGG 301 Query: 289 ADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIA 348 A+GA+DA N+LKPALARGE+ +GATTL+EY++Y+E DAALERRF V + EP+ E + Sbjct: 302 AEGAIDASNILKPALARGEVQVIGATTLNEYQKYVEADAALERRFASVTINEPTPEVALT 361 Query: 349 ILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSK 408 IL+GL+ +YE HH +QITD A+ +A LS RYIA R LPDKAIDL+DEAA+ +R+ K Sbjct: 362 ILKGLRPKYEKHHQLQITDEALESAVKLSKRYIASRFLPDKAIDLMDEAAARVRINNAQK 421 Query: 409 PEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKAS 468 +++ + +++ +L E+ + + D E+ ++E + E E+ Sbjct: 422 VDKVSAIKKKLSELSQEKTEALLKEDFEKA-------AEIRNEELKIQEKLEKQIQRDKD 474 Query: 469 LSGTQTIKAELEQAKIAIEQARRVG-DLARMSELQYGKIPELEKQLEAATQLEGKTMRLL 527 + + ++ IA + G + +++ + ++ LEK L + + ++ + Sbjct: 475 EEDSNNYRVKVTAEDIAEVVSEWTGVPVTQINRSEGDRLIRLEKILHNRVIGQDEAVKAV 534 Query: 528 RNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRS 587 + + Sbjct: 535 SKAIRR-----------------------------------------------------A 541 Query: 588 RAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLV 647 R+GL DP RPIGSF+FLGPTGVGKTEL KALA MF S+++M+RIDMSE+MEK++ SRL+ Sbjct: 542 RSGLKDPTRPIGSFMFLGPTGVGKTELAKALAEAMFGSEDSMIRIDMSEYMEKYTTSRLI 601 Query: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTV 707 G+PPGYVGY+EGG LTE VR PYSV+LLDEVEKAH DVFNILLQVLDDG LTD +GR V Sbjct: 602 GSPPGYVGYDEGGQLTEKVRNNPYSVVLLDEVEKAHNDVFNILLQVLDDGFLTDSKGRKV 661 Query: 708 DFRNTVVIMTSNLGSDLIQERFG--------ELDYAHMKELVLGVVSHNFRPEFINRIDE 759 DFRNT++IMTSNLG+ +++ DY M V + FRPEF+NR+DE Sbjct: 662 DFRNTIIIMTSNLGATALRDEKSVGFGAKDVSDDYEAMAAKVRETLKKTFRPEFLNRLDE 721 Query: 760 VVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKR 819 +VVFH L ++ I I ++ K + R++E+ + I+ A+ +++E G+D YGARP++R Sbjct: 722 IVVFHSLNKEEIHQIVKLMAKNIIDRIKEQNINLKITPAAIDIVAEAGFDAEYGARPIRR 781 Query: 820 AIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855 +Q +IE+ L++++L+G + G + + + I Sbjct: 782 ILQDKIEDLLSEELLAGNIETGATVTIGAKKGEITI 817 >UniRef50_A9FG71 ATPase with chaperone activity, two ATP-binding domains n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FG71_SORC5 Length = 871 Score = 692 bits (1786), Expect = 0.0, Method: Composition-based stats. Identities = 361/865 (41%), Positives = 537/865 (62%), Gaps = 14/865 (1%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 LDR T + +A AQ +A + + PLHL+ LL ++ G VS + AG + ++ Sbjct: 10 LDRYTGDAKQVVAGAQQIADERQHAEVTPLHLLMRLLERDRG-VSEVFRRAGADPNEVLQ 68 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES-RGT 121 AL +L + G+ G S L+ +L ++ A + + E + A + RG Sbjct: 69 LAENALKKLSRA-GSSGVAYVSPRLLDLLGRAEREATRDKSQNVGIEHLLHALAQEIRGP 127 Query: 122 LADILKAAGATTANITQA--IEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDP 179 +IL + G + E + YT DL A +G+ DP Sbjct: 128 AGEILSSFGIGPGAFRPHLGALEAASREPSPAPANAAEPGQPAPYTRDLVADAREGRFDP 187 Query: 180 VIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLA 239 VIGRD E RR +Q+L+RR KN+P+++GEPGVGKTA++ GLA RI +G+VP L G + Sbjct: 188 VIGRDVEARRLLQILERRFKNHPLIVGEPGVGKTALIRGLADRIAHGDVPTNLAGAHLYE 247 Query: 240 LDMGALVAGAKYRGEFEERLKGVLNDLA-KQEGNVILFIDELHTMVGAGKADGAMDAGNM 298 LD GALVAGAK RGE E+RLK +++ L +Q+ IL +++L + G G + G + Sbjct: 248 LDTGALVAGAKLRGEIEQRLKVLVDRLRGEQDAESILVVEDLDALFGQGVQGAGV--GEL 305 Query: 299 LKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYE 358 LKP L+RGE+ + TT + R+ E+D + RRF + + PS++ ILRG+ +YE Sbjct: 306 LKPLLSRGEIRIIATTTPEGVRKINERDPGIIRRFSTITLEAPSIDQATEILRGIATKYE 365 Query: 359 LHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418 HH V++ + AI +A L+ RYI+DR LPD A+DL+DE ++ R+++D P ELD L RR Sbjct: 366 AHHRVRVGESAITSAVALAKRYISDRALPDTAVDLLDETSARKRVEVDGVPAELDTLTRR 425 Query: 419 IIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAE 478 + L+ + AL + D+ S + L EL++ E + S + + + ++ Q I+ E Sbjct: 426 VDALRAQIAALADDDDKLSVQTRTRLEAELAEIEPKASSMRSRNASRRGVIAACQAIRRE 485 Query: 479 LEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQL-EGKTMRLLRNKVTDAEIA 537 L A A++ A+R A++ EL++ +PE+ ++L+AA + + + + N V ++++A Sbjct: 486 LVAATEALKAAQRDKAFAKIGELEHVTLPEIRRRLQAAEEAAQREGVAPTSNVVAESDVA 545 Query: 538 EVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRP 597 L WTGIPV++M+E E EKLL+ME L RV+GQ+EAV A++ A+RR R GL DP +P Sbjct: 546 ATLNDWTGIPVAKMLEGEAEKLLKMEARLAQRVVGQDEAVRAIAKAVRRGRVGLRDPGKP 605 Query: 598 IGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYE 657 IGSFLFLGP+GVGKTEL KALA F+FD ++A+ R+DMSEFME+H RL+GAPPGY E Sbjct: 606 IGSFLFLGPSGVGKTELAKALAEFLFDDEQALTRMDMSEFMERHMAQRLIGAPPGYADSE 665 Query: 658 EGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMT 717 +GG+LTEA RRRPYSV+L DEVEKAH DVFN+LLQ+LDDGRLTDG+GR DF NTVVIMT Sbjct: 666 QGGFLTEAARRRPYSVLLFDEVEKAHADVFNLLLQILDDGRLTDGRGRLADFSNTVVIMT 725 Query: 718 SNLGSDLIQER-----FGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIA 772 SN+GS + E E +++++L + FRPEF+NR+D++VVF L ++ + Sbjct: 726 SNIGSKRVLETDAKLWTTEDGREAIRDVLLEELRGFFRPEFLNRVDDIVVFKALSKEDLR 785 Query: 773 SIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQ 832 I IQL+RL + L ++ + ++D A L E GY+P GARPLKRAI ++++NPLA+ Sbjct: 786 GIVDIQLRRLEQLLTDKDIRLALTDAAKARLVELGYEPSLGARPLKRAILRELQNPLAET 845 Query: 833 ILSGELVPGKVIRLEVNEDRIVAVQ 857 IL+G PG+ ++++V +++ V + Sbjct: 846 ILAGGYQPGQTMQVDVVDEKFVFTK 870 >UniRef50_A7JYI1 ATPases with chaperone activity, ATP-binding subunit n=15 Tax=Gammaproteobacteria RepID=A7JYI1_VIBSE Length = 892 Score = 691 bits (1782), Expect = 0.0, Method: Composition-based stats. Identities = 315/879 (35%), Positives = 492/879 (55%), Gaps = 32/879 (3%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 + RL ++AL DA +LA+ ++ H + +LL + LL+ + LR Sbjct: 10 IQRLHPIAKVALEDAAALAVSEKANEVQIEHYLLSLLERPNSDFDVLLSHFDCSENLLRQ 69 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQ-KRGDNFISSELFVLAALESR-- 119 + L+ +G G S L+ L ++ + I S +L + + Sbjct: 70 SVRSTLDT--SAKGNGSKPVFSALLIEWLQESWLVSSLDLSETQIRSGALLLTLVSNPLR 127 Query: 120 ---GTLADILKAAGATTANITQAIEQMRGGE----SVNDQGAEDQRQALKKYTIDLTERA 172 A L+A + A + E + A + AL K+T D T +A Sbjct: 128 YGQHGYASTLEAVNPDSLKRNFAELTSQSIEAQVATSEKTQAREDGSALSKFTTDFTGKA 187 Query: 173 EQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGL 232 +G++DPV RD+EIR+ + +L RR KNNP+ +GEPGVGKTA+VEGLA +I+ G+VP+ L Sbjct: 188 RKGEIDPVFCRDQEIRQIVDILARRRKNNPIAVGEPGVGKTAVVEGLALKIVQGDVPDNL 247 Query: 233 KGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGA 292 KG + LDMG L AGA +GEFE+RL VL+++ +ILFIDE HT+VG G G Sbjct: 248 KGVELYGLDMGLLQAGASVKGEFEKRLNAVLDEVKNSPTPIILFIDEAHTLVGGGNQAGG 307 Query: 293 MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRG 352 DA N+LKPALARGE+ + ATT EY++Y EKD AL RRFQ V + EPS E I+RG Sbjct: 308 SDAANLLKPALARGEVKTIAATTWSEYKKYFEKDPALARRFQLVKLDEPSPEQAALIIRG 367 Query: 353 LKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEEL 412 L+ YE H+V + D AI AAA LS RYI+ RQLPDKAID++D A + + + +++ P + Sbjct: 368 LRPAYEKSHNVYVRDDAITAAAALSARYISGRQLPDKAIDVLDTACARVNISLNAIPASV 427 Query: 413 DRLDRRIIQLKLEQQALMKES-----DEASKKRLDMLNEELSDKERQYSELEEEWKAEKA 467 + L + + + E +AL +++ D+ S + L + + + +E E +W EK Sbjct: 428 ETLQQELAAQQRELEALERDALQQTGDKHSLANIPDLELAMETTKEELAEQEAQWHKEKE 487 Query: 468 SLSGTQTIKAEL---------EQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQ 518 + +++ L E+ +A E + + D++ +E+ + + Sbjct: 488 QIQEMIALRSRLHELVFGETNEEELVAEEDSEQEQDVSPYAEMDEEAVRIAISACQEQLD 547 Query: 519 LEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVD 578 L+ +V E++ V++ WTGIP+ +M++ E E L++++ L + GQ A+D Sbjct: 548 AIRNGNPLVHFEVGPDEVSHVISDWTGIPMGKMLQDEAETTLKLKESLTQSIKGQEYAID 607 Query: 579 AVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFM 638 A+S I+ ++AGL +P+ P G FL +GP+GVGKTE +++A+ MF + M I+MSEF Sbjct: 608 ALSEGIQTAKAGLGNPDAPTGVFLLVGPSGVGKTETARSIADQMFGGERFMTTINMSEFQ 667 Query: 639 EKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGR 698 EKH+VSRL+G+PPGYVGY EGG LTEAVR+RPYSV+LLDEVEKA P+V N+ QV D G Sbjct: 668 EKHTVSRLIGSPPGYVGYGEGGMLTEAVRQRPYSVVLLDEVEKADPEVLNLFYQVFDKGT 727 Query: 699 LTDGQGRTVDFRNTVVIMTSNLGSDLIQE---RFGELDYAHMKELVLGVVSHNFRPEFIN 755 L DG+GRT+DF+NT++IMTSNL + I+ + ++D + E + ++ +F+P + Sbjct: 728 LNDGEGRTIDFKNTLIIMTSNLATHEIESLVHQSKDIDANIIAEAIRPTLNQHFKPALLA 787 Query: 756 RIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERG-YEIHISDEALKLLSENGYDPVYGA 814 R+ V+ F PL ++ + I +L ++ +RL+ + + ++ + N GA Sbjct: 788 RM-SVLPFVPLSDEAMTEIIHHKLNKVSQRLQSHHKLSLSYEESLVEFVLGNCRLAETGA 846 Query: 815 RPLKRAIQQQIENPLAQQILSGELVPGKV-IRLEVNEDR 852 R + I +Q+ L+ Q+L + I + V+E Sbjct: 847 RNIDAVINRQLLPQLSTQLLVHDKDDSHTQIEVSVDEQG 885 >UniRef50_D2KTB1 BC18 (Fragment) n=1 Tax=Babesia caballi RepID=D2KTB1_BABCB Length = 1037 Score = 690 bits (1779), Expect = 0.0, Method: Composition-based stats. Identities = 316/906 (34%), Positives = 474/906 (52%), Gaps = 51/906 (5%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 + + ++ L +Q A I H+ L+ + G + +L + + Sbjct: 93 LNFNNFSDNAVKVLMLSQEEARRAALNQIATKHIFQGLVCLDSGLAAQVLREFDVTVKKT 152 Query: 61 RTDINQALNRLPQVEGTGGD--VQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES 118 R A + + G+ + S D L L A+ G I +E +L L S Sbjct: 153 REAAETAASEPSDTKEASGERLMTFSPDAKEALELSSAEAEHMGHTTIETEHILLGVLGS 212 Query: 119 RGT-LADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQ------------------ 159 R +A +L+A + +A + + + Q Sbjct: 213 RSEGMAQLLEALSLNADVVRKATLKYIEEHKEHSEDRAQQETWKQTLSQYSYIPAQGRAV 272 Query: 160 ----------ALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPG 209 L +T+DLTE+AEQGKL V+ RD EI R I+ L RR K NP+LIGEPG Sbjct: 273 EVTKDAYAASPLGAFTVDLTEKAEQGKLQKVLCRDAEIDRAIRTLCRRHKRNPILIGEPG 332 Query: 210 VGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQ 269 VGKTA+VEGLA ++++G + L+ +RV LD+G +VAGA++RG+FEERL ++ ++ K Sbjct: 333 VGKTAVVEGLAMQLLDGAMVPSLRNKRVKQLDIGLMVAGARFRGQFEERLTKLIEEV-KA 391 Query: 270 EGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAAL 329 G+VIL IDE H +VGAG +GA+DA N+LKP+LARGE+ C+ TT EYR+Y EKD AL Sbjct: 392 MGDVILVIDEAHMLVGAGAGEGALDAANLLKPSLARGEIQCIAITTPREYRKYFEKDPAL 451 Query: 330 ERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDK 389 RRFQ ++V EPS EDT I+ E Y H V+ A+VAA S ++I DR LPDK Sbjct: 452 SRRFQPIYVNEPSDEDTKKIIAATTESYGRFHRVKYDPKAVVAALKYSKQFIQDRFLPDK 511 Query: 390 AIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELS 449 A+D++DEA S +M+ K R L+ E + + + + Sbjct: 512 ALDILDEAGSLAKMRFYEKSVSGHDYARNEGDLQANVGVACGEGTSGDVRMSVEIEVDEA 571 Query: 450 DKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIE--QARRVGDLARMSELQYGKIP 507 + + +A + E S+ Sbjct: 572 KGSSVVNSPGNVENGSADGGMDGDVASGKDLEAAKSDEATNYAEYESDHDSSDFGSEDAY 631 Query: 508 ELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELH 567 + E E EG +V +AEV++ WTGIP+ ++ E E E + ME+E+H Sbjct: 632 DAETGSELEYGPEGTFSGDPLCEVGMEHVAEVVSTWTGIPLKKLSEDELEAMRNMEREIH 691 Query: 568 HRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDE 627 ++G EAV+ + AIRR+ A + DP+RPIGSFLF GP GVGK+E+ KAL F+F + Sbjct: 692 KSIVGHEEAVEHICKAIRRATAKIKDPDRPIGSFLFCGPPGVGKSEIAKALTKFLFAKE- 750 Query: 628 AMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVF 687 ++++DMSE+ E HS+SR++G+PPGY G++ GG LTE +R+ PYSV++ DE+EKAH DV Sbjct: 751 NLIKLDMSEYNEPHSISRILGSPPGYKGHDAGGQLTEKLRKSPYSVVMFDEIEKAHRDVL 810 Query: 688 NILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERF----------------GE 731 N+LLQ+L+DG+LTD + + V F+N V+IMTSNLGS++I+ + Sbjct: 811 NLLLQILEDGKLTDSRNQVVSFKNAVIIMTSNLGSNVIERASRGVHAFGFNVEEKVTDPK 870 Query: 732 LDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGY 791 +Y +K LV + F+PE I+RID++++F PL EQ + IA + ++ KR E G+ Sbjct: 871 ENYTKIKALVCEELKSQFKPELIDRIDDIILFRPLEEQQLRQIAVLMIEETVKRARENGF 930 Query: 792 EIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNED 851 + D + + + D GARPL+R I +E+ LA+ +S E VPG+ R+ V Sbjct: 931 SVVADDAFVDYVLKLPRDEKGGARPLRRLITTSLEDKLAEFFISQEYVPGQRYRVTVEGT 990 Query: 852 RIVAVQ 857 +V + Sbjct: 991 NVVIRR 996 >UniRef50_A6FFT5 Putative ATPase with chaperone activity n=1 Tax=Moritella sp. PE36 RepID=A6FFT5_9GAMM Length = 865 Score = 689 bits (1777), Expect = 0.0, Method: Composition-based stats. Identities = 308/875 (35%), Positives = 471/875 (53%), Gaps = 46/875 (5%) Query: 4 DRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTD 63 D+L + AL A L +E H + L+ + ++ + GI+ L + Sbjct: 11 DKLNQNGKKALEGAAGLCHSRSQFTVEIEHWLLQLVENKQDDIAIICQLQGIDVQVLINE 70 Query: 64 INQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLA 123 +N +L R Q G S ++ +L D +L L S ++ Sbjct: 71 LNLSLER--QKTGNSAAPSLSPHIITLLRQSWLNTTIEFDEQQIRSGIILYTLLSDDSIN 128 Query: 124 DILKAAGATTANITQAIEQMRGGESVNDQGAE--------------DQRQALKKYTIDLT 169 +L ++ + + + + +L ++T+DLT Sbjct: 129 AMLSRHIRQFERLSANLIRDNWSIITEKSAEQNGIVAVSNAGVATNSKTPSLDQFTVDLT 188 Query: 170 ERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVP 229 E+A GK+DP++GRD EIR+ + +L RR +NNP+L GE GVGKTA+VEGLAQRI+ +VP Sbjct: 189 EKARNGKMDPILGRDPEIRQMVDILTRRRQNNPILTGEAGVGKTAVVEGLAQRIVAKDVP 248 Query: 230 EGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKA 289 E L+ ++ LD+ L AGA +GEFE RLK VLN++ + +ILFIDE HTM+GAG A Sbjct: 249 ESLQHVQLRELDLALLQAGAGMKGEFENRLKAVLNEVKQSATPIILFIDEAHTMIGAGGA 308 Query: 290 DGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAI 349 G DA N+LKPALARGEL + ATT EY++Y EKD AL RRFQ V + EPSV + + Sbjct: 309 AGQNDAANILKPALARGELRTIAATTWAEYKKYFEKDPALTRRFQVVKIEEPSVPTAVIM 368 Query: 350 LRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKP 409 LRG+ E HH V IT A+ AA LS RYI RQLPDKA+ L+D A + + + + P Sbjct: 369 LRGILPVMEQHHDVVITADALQAAVALSKRYINGRQLPDKAVALLDSACARVAISQAATP 428 Query: 410 EELDRLDRRIIQLKLEQQALMKES--DEASKKRLDMLNEELSDKERQYSELEEEWKAEKA 467 ++ L R+ QL+ E + L +E E + L +L E + WK + Sbjct: 429 GLVEDLQRKKAQLEAEIKLLEREQLSGEDHGDVIIALQSDLVGVEDNLVVELQAWKTQSE 488 Query: 468 SLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLL 527 + Q A++ + E+ Y ++ L+ +L A ++ Sbjct: 489 LVQAIQQQIADIHEHGAEQEK--------------YIRLTALKAELHEAK------NTMV 528 Query: 528 RNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRS 587 +V + I EV++ WTGIP+ +M + E E +L + E+ RVIGQ+ A+D ++ ++ S Sbjct: 529 YWQVDEQVICEVISDWTGIPLGKMAQDELETVLNLSAEMKTRVIGQDHAIDLIARTVQIS 588 Query: 588 RAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLV 647 RA L+D ++P G F+ GP+GVGKTE LA ++ S+E ++ I+MSE+ E+H VS L+ Sbjct: 589 RAQLSDESKPNGIFMLTGPSGVGKTETALTLAEQVYGSEENIITINMSEYKEEHKVSLLL 648 Query: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTV 707 G+PPGYVG+ EGG LTEAVRR PYSV+LLDE++KA P V +I Q+ D G + DG+GR + Sbjct: 649 GSPPGYVGFGEGGVLTEAVRRNPYSVVLLDEIDKAAPGVQDIFYQIFDKGCVKDGEGRDI 708 Query: 708 DFRNTVVIMTSNLGSDLIQERFGELDY----AHMKELVLGVVSHNFRPEFINRIDEVVVF 763 DF+NT++IMTSN+G+D I F + D + + + G + F+P F+ R ++ F Sbjct: 709 DFKNTIIIMTSNVGTDTITALFADPDTAPELDSLADCIKGDLMAAFKPAFLGR-ANIIPF 767 Query: 764 HPLGEQHIASIAQIQLKRLYKRLEE-RGYEIHISDEALKLLSENGYDPVYGARPLKRAIQ 822 PL + +++IAQ+Q+ RL R+ E + +E + + +D GAR + +Q Sbjct: 768 VPLTDDMLSTIAQLQINRLAARIRRNHNAEFIVDNEVITQIVSRCHDVASGARTIHNYLQ 827 Query: 823 QQIENPLAQQILSG--ELVPGKVIRLEVNEDRIVA 855 + ++ Q+L + I + NED + Sbjct: 828 NTLLPEISVQVLQAMTQQTEFSQINVTTNEDNFII 862 >UniRef50_D1HM97 Whole genome shotgun sequence of line PN40024, scaffold_108.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1HM97_VITVI Length = 875 Score = 687 bits (1773), Expect = 0.0, Method: Composition-based stats. Identities = 389/848 (45%), Positives = 541/848 (63%), Gaps = 100/848 (11%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 T A+ + +A + +Q +E HLM ALL Q+ G + + AG++ +L + Sbjct: 86 FTEMAWQAIVSSPEVAKENKHQIVETEHLMKALLEQKNGLARRIFSKAGVDNTRLLDATD 145 Query: 66 QALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADI 125 + + R P+V G +DL ++ + ++ GD+F+S E VLA ++ + + Sbjct: 146 KFIQRQPKVIGESAGSMLGRDLESLIQRAREYKKEYGDSFVSVEHLVLAFVQDQRFGKQL 205 Query: 126 LKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDE 185 K + + AIE +RG + V DQ E + +AL+KY DLT A+ GKLDPVIGRD+ Sbjct: 206 FKDFQISQKALKSAIEAIRGRQQVIDQDPEGKYEALEKYGKDLTAMAKAGKLDPVIGRDD 265 Query: 186 EIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGAL 245 EIRR IQ+L RRTKNNPVLIGEPGVGKTAI EGLAQRI+ G+VP+ L R++++LDMGAL Sbjct: 266 EIRRCIQILSRRTKNNPVLIGEPGVGKTAISEGLAQRIVQGDVPQALMNRKLISLDMGAL 325 Query: 246 VAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALAR 305 +AGAK+RGEFE+RLK VL ++ + +G ILFIDE+HT+VGAG +GAMDAGN+LKP L R Sbjct: 326 IAGAKFRGEFEDRLKAVLKEVTESDGQTILFIDEIHTVVGAGATNGAMDAGNLLKPMLGR 385 Query: 306 GELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQI 365 GEL C+GATTLDEYR+YIEKD ALERRFQ+V+V +P+VEDTI+ILRGL+ERYELHH V+I Sbjct: 386 GELRCIGATTLDEYRKYIEKDPALERRFQQVYVDQPTVEDTISILRGLRERYELHHGVRI 445 Query: 366 TDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLE 425 +D A+V AA LS RYI+ R LPDKAIDL+DEAA+ ++M+I SKP LD ++R +++L++E Sbjct: 446 SDSALVEAAILSDRYISGRFLPDKAIDLVDEAAAKLKMEITSKPTALDEINRSVLKLEME 505 Query: 426 QQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIA 485 + +L ++D+ASK RL L ELS + + +EL E+W+ EK+ ++ Q+IK E+++ + Sbjct: 506 RLSLTNDTDKASKDRLSRLEAELSLLKEKQAELSEQWEHEKSVMTRLQSIKEEIDRVNLE 565 Query: 486 IEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGK----TMRLLRNKVTDAEIAEVLA 541 I+QA R DL R +EL+YG + L++QLE A + + +LR +VT +IAE+++ Sbjct: 566 IQQAEREYDLNRAAELKYGSLNSLQRQLENAEKELDEYMKSGKSMLREEVTGNDIAEIVS 625 Query: 542 RWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSF 601 L+DP+RPI SF Sbjct: 626 -------------------------------------------------LSDPHRPIASF 636 Query: 602 LFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGY 661 +F+GPTGVGKTEL KALA++MF+++EA+ EGG Sbjct: 637 MFMGPTGVGKTELAKALASYMFNTEEAL----------------------------EGGQ 668 Query: 662 LTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLG 721 LTE VRRRPY+VIL DE+EKAH DVFN+ LQ+LDDGR+TD QGRTV F NTV+IMTSN Sbjct: 669 LTETVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSN-- 726 Query: 722 SDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKR 781 + V+ FRPEF+NR+DE +VF PL I+SI ++QL+R Sbjct: 727 -----------------QRVMDAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVKLQLER 769 Query: 782 LYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPG 841 + RL +R ++ +++ A++LL GYDP YGARP+KR IQQ +EN LA+ IL GE Sbjct: 770 VQLRLADRKMKLQVTETAIQLLGSLGYDPNYGARPVKRVIQQNVENELAKGILRGEFKDE 829 Query: 842 KVIRLEVN 849 + ++ Sbjct: 830 DTVLIDTE 837 >UniRef50_C1EC57 ATP-dependent clp protease n=2 Tax=Micromonas RepID=C1EC57_9CHLO Length = 1033 Score = 686 bits (1770), Expect = 0.0, Method: Composition-based stats. Identities = 357/887 (40%), Positives = 498/887 (56%), Gaps = 89/887 (10%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 ++ T + A+ AQ A + H++ L+ +E L G+ R Sbjct: 106 FEKFTERAIKAVMLAQQEAKALRRPEVGVEHIVMGLVAEEAKKGGWL--GTGVTIDSARE 163 Query: 63 ---DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALE-S 118 +I + +V S+ RV + G N+I+ E LA E Sbjct: 164 KAKEIVSFDKDRAARRTSTSEVPFSRGAKRVFEAALNNSTNMGMNYIAPEHIALAVAELD 223 Query: 119 RGTLADILKAAGATTANITQAIEQMRGG-------------------ESVNDQGAEDQRQ 159 +L + + + E+ + +D++ Sbjct: 224 DESLVKYFEMLSTSRTFVKNEAERRLKTEKEKESGPAARPNTSLAPRQRQQQASQKDEKS 283 Query: 160 ALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGL 219 L + DLT+RA K+DP+IGRDEE+ R IQ+L RR+KNNP+L+GEPGVGKTAI EGL Sbjct: 284 PLNDFCFDLTQRARDEKIDPIIGRDEEVERVIQILARRSKNNPILLGEPGVGKTAIAEGL 343 Query: 220 AQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDE 279 A RI++G VPE L+ +RVL+LD+G L+AGAK RGE E R+ G++ ++ ++ +V+L IDE Sbjct: 344 ALRIVSGNVPEFLREKRVLSLDVGLLMAGAKERGELESRVTGLIKEIQDKK-DVVLMIDE 402 Query: 280 LHTMVGAGKADGA----MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQK 335 +HT++GAG MD NMLKP LARGEL C+GATT+DE+R+YIEKDAALERRFQ Sbjct: 403 VHTLIGAGAVGKGGGGGMDISNMLKPPLARGELQCIGATTVDEHRKYIEKDAALERRFQP 462 Query: 336 VFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLID 395 V V EPS ED I IL GL+ERYE HH +ITD A++AA +S RYIADR LPDKAIDL+D Sbjct: 463 VMVEEPSEEDAIEILFGLRERYEAHHMCEITDDALIAAVQISSRYIADRFLPDKAIDLVD 522 Query: 396 EAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQY 455 EA S+ R++ +E + ++ Sbjct: 523 EAGSAARIKQYMAQKERRGEVDKATSMEAM------------------------------ 552 Query: 456 SELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEA 515 E W+A K + L E+A + D R + K+ +L Sbjct: 553 ----EMWRALKQVSEAKEAAVRGL-----LFEEATLLRDREREVKTNLSKLGVKVDEL-- 601 Query: 516 ATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNE 575 KVT EI V A W+GIPV RM E+ L M+Q+L VIGQ E Sbjct: 602 -----TGDGAYGGAKVTVDEIEAVAAMWSGIPVQRMTLDEQAILANMDQDLQGSVIGQEE 656 Query: 576 AVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMS 635 AV AVS ++RR+R GL DPNRPI S LF GPTGVGKTEL K LA F S++ MVR+DMS Sbjct: 657 AVSAVSRSLRRTRCGLKDPNRPIASMLFAGPTGVGKTELTKRLAEKYFGSEDNMVRLDMS 716 Query: 636 EFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLD 695 E+ME+HSVS+LVGAPPGYVG+ +GG LTEAVRR+P++++L DE+EKAHPDVFNILLQ+++ Sbjct: 717 EYMERHSVSKLVGAPPGYVGFGQGGTLTEAVRRKPFTILLFDEIEKAHPDVFNILLQMME 776 Query: 696 DGRLTDGQGRTVDFRNTVVIMTSNLGSDLI-------------QERFGELDYAHMKELVL 742 DGRLTD QGR V F+N ++++TSN+GS +I + G +Y ++E VL Sbjct: 777 DGRLTDSQGRVVSFKNCLIVLTSNVGSKVIAKGGGGLGFQLQDDDEEGSAEYKRIREKVL 836 Query: 743 GVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKL 802 + + FRPE +NR+DE+V F L ++ + IA++ L+ R+ +G E+ ++ A+ Sbjct: 837 DELKNFFRPEMLNRLDEIVCFKQLEKESVQRIARLMLRETAGRMRLKGMEMALTASAMDK 896 Query: 803 LSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVN 849 L E G+D YGARPL+RAI I++ L++ +L G + G V ++ + Sbjct: 897 LLETGFDKEYGARPLRRAITSIIDDNLSEAMLRGVIHEGDVAVIDYD 943 >UniRef50_Q83FI1 Chaperone protein clpB n=13 Tax=Bacteria RepID=CLPB_TROWT Length = 705 Score = 682 bits (1759), Expect = 0.0, Method: Composition-based stats. Identities = 375/706 (53%), Positives = 514/706 (72%), Gaps = 7/706 (0%) Query: 148 SVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGE 207 + + L KY +LT+ A KLDPVIGRD EIRR Q+L RRTKNNPVLIG Sbjct: 1 MCGGSFMSESQSELDKYGTNLTKTAATNKLDPVIGRDAEIRRVCQILSRRTKNNPVLIGS 60 Query: 208 PGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLA 267 GVGKTAIVEGLAQRI+ G+VPE L+ + +++LD+ AL+AGA YRGEFE+R+K +L ++ Sbjct: 61 AGVGKTAIVEGLAQRIVAGDVPESLRNKEIVSLDLSALLAGASYRGEFEKRVKNLLEEIQ 120 Query: 268 KQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDA 327 K VI+FIDE+HT++ AG A+GA+ AGNMLKP LARGEL +GATTLDEYR+++EKD Sbjct: 121 KS--KVIIFIDEVHTLMSAGAAEGAIAAGNMLKPLLARGELRLIGATTLDEYREHLEKDP 178 Query: 328 ALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLP 387 ALERRFQ+VFV EP++ED IAI+RGLKERYE HH V I+D A+V A LS RYI RQLP Sbjct: 179 ALERRFQQVFVGEPNLEDCIAIMRGLKERYEAHHKVSISDTALVTAVELSSRYITGRQLP 238 Query: 388 DKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEE 447 DKAIDL+DEAASS+RM+IDS P ELD+L R + +L+LE+ AL E+D S++RL + + Sbjct: 239 DKAIDLLDEAASSLRMEIDSSPVELDQLRREVDRLRLEELALKSENDPTSEQRLRSITNQ 298 Query: 448 LSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIP 507 LS K+ + L+ W +E+A L+ +K +++ AK + + A+R G L S L Y IP Sbjct: 299 LSGKQEMLNTLQASWNSERARLNQIGALKEQIDIAKQSADIAQREGRLEDASRLLYATIP 358 Query: 508 ELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELH 567 +L+K L A E + L+ ++V +IA V+ WTGIPV ++M+ + ++LL +E++L Sbjct: 359 QLQKNL-AEKLEEQDSAPLVSDQVMPEDIASVVEGWTGIPVKKLMQKDAKQLLHLEEDLS 417 Query: 568 HRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDE 627 VI Q A+ +++A+RRSRAGL+DPNRP G+FLFLGPTGVGKT+L KALA+ ++D + Sbjct: 418 KSVIAQKVAIGVIADAVRRSRAGLSDPNRPSGTFLFLGPTGVGKTQLVKALASLLYDGE- 476 Query: 628 AMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVF 687 +VRIDMSE+ EK S+SRL+GAPPGY+G+E G LTE+VRRRPYSV+L DE EKAHP+VF Sbjct: 477 -IVRIDMSEYSEKFSISRLIGAPPGYIGHESAGQLTESVRRRPYSVVLFDEAEKAHPEVF 535 Query: 688 NILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSH 747 +ILLQVLD+GRLTD GRTVDFRNT++++TSN+GS + + E AH E V V Sbjct: 536 DILLQVLDEGRLTDSHGRTVDFRNTIIVLTSNIGSRYLSDISLEATTAH--EYVNDEVRR 593 Query: 748 NFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENG 807 FRPEF+NR+DE+V+F PL + I I + ++ L KR+++R + +S++ + LS++G Sbjct: 594 TFRPEFLNRLDEIVIFEPLSQSDICQIVDLNIESLNKRIKDRRIVVTVSEDLRRWLSKSG 653 Query: 808 YDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRI 853 YD +YGARPL+R IQ++IE+ LA+ I+ G + G+ +++ + Sbjct: 654 YDVIYGARPLRRLIQREIEDRLAKLIIEGLIHDGQTASFDLSGGAV 699 >UniRef50_Q9I742 Protein clpV1 n=17 Tax=Proteobacteria RepID=CLPV1_PSEAE Length = 902 Score = 674 bits (1740), Expect = 0.0, Method: Composition-based stats. Identities = 314/888 (35%), Positives = 481/888 (54%), Gaps = 40/888 (4%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +L + A+ A N ++E +H +L + ++ +GI+ +L Sbjct: 10 FGKLNSLAYKAIEAATVFCKLRGNPYVELVHWFHQILQLPDSDLHQIVRQSGIDPARLAK 69 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKR-GDNFISSELFVLAALESRGT 121 D+ +AL+RLP+ + D S + + G++ + + V+ L++ Sbjct: 70 DLTEALDRLPRGSTSITD--LSSHVEEAVERGWVYGSLMFGESQVRTGYLVIGILKTPSL 127 Query: 122 LADILK-------------------------AAGATTANITQAIEQMRGGESVNDQGAED 156 + G + ++ A A Sbjct: 128 RHALTGLSAEFAKLKVEALTERFDEYVGASPENGLSASDGFNAGAAPGEASGALAPSAMG 187 Query: 157 QRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIV 216 +++ALK++T+DLTE+A GKLDP++GRDEEIR+ + +L RR +NNP+L GE GVGKTA+V Sbjct: 188 KQEALKRFTVDLTEQARSGKLDPIVGRDEEIRQLVDILMRRRQNNPILTGEAGVGKTAVV 247 Query: 217 EGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILF 276 EG A RI+ G+VP LK + ALD+G L AGA +GEFE+RL+ V+ D+ E +ILF Sbjct: 248 EGFALRIVAGDVPPALKDVELRALDVGLLQAGASMKGEFEQRLRQVIEDVQSSEKPIILF 307 Query: 277 IDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKV 336 IDE HT+VGAG A G DA N+LKPALARG L V ATT EY+++IEKD AL RRFQ V Sbjct: 308 IDEAHTLVGAGGAAGTGDAANLLKPALARGTLRTVAATTWAEYKKHIEKDPALTRRFQVV 367 Query: 337 FVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDE 396 V EPS I ++RG+ E HH VQI D A+ AA LSHRYI RQLPDK++ L+D Sbjct: 368 QVDEPSEHKAILMMRGVASTMEKHHQVQILDEALEAAVRLSHRYIPARQLPDKSVSLLDT 427 Query: 397 AASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEAS--KKRLDMLNEELSDKERQ 454 A + + + + P E+D RRI L+ E + +ES +R L+++ + Sbjct: 428 ACARTAISLHAVPAEVDDSRRRIEALETELAIIRRESAIGVATAERQRNAETLLAEERER 487 Query: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQ--ARRVGDLARMSELQYGKIPELEKQ 512 + LE+ W EK + +A L A A++ R+ E Q + + Sbjct: 488 LAALEQRWAEEKRLVDELLETRARLRAAAEAVDAGGVPLGEGEVRLDEEQRQALHARLAE 547 Query: 513 LEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIG 572 L+A L+ V +A V+A WTGIPV RM +E E +L +++ L R+IG Sbjct: 548 LQAQLSALQGEEPLILPTVDYQAVASVVADWTGIPVGRMARNEIETVLNLDRHLKKRIIG 607 Query: 573 QNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRI 632 Q+ A++ ++ I+ SRAGL +P++PIG F+ G +GVGKTE ALA M+ ++ ++ I Sbjct: 608 QDHALEMIAKRIQTSRAGLDNPSKPIGVFMLAGTSGVGKTETALALAEAMYGGEQNVITI 667 Query: 633 DMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQ 692 +MSEF E H+VS L GAPPGY+GY EGG LTEAVRR+PYSV+LLDEVEKAHPDV I Q Sbjct: 668 NMSEFQEAHTVSTLKGAPPGYIGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVHEIFFQ 727 Query: 693 VLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVS----HN 748 V D G + DG+GR +DF+NT++++T+N G+++I + + E + + Sbjct: 728 VFDKGVMEDGEGRVIDFKNTLILLTTNAGTEMIASLCADPELMPEPEAIAKSLREPLLKI 787 Query: 749 FRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEE-RGYEIHISDEALKLLSENG 807 F P + R+ + ++PL + + +I+++QL R+ KR+E + + L+ Sbjct: 788 FPPALLGRL-VTIPYYPLSDDMLKAISRLQLGRIKKRVEATHKVPFEFDEGVVDLIVSRC 846 Query: 808 YDPVYGARPLKRAIQQQIENPLAQQILSGEL--VPGKVIRLEVNEDRI 853 + G R + + + ++++ L+ L P +R+ +++ Sbjct: 847 TETESGGRMIDAILTNTLLPDMSREFLTRMLEGKPLAGVRISSRDNQF 894 >UniRef50_A6FZR3 ATP-dependent chaperone protein ClpB n=3 Tax=Proteobacteria RepID=A6FZR3_9DELT Length = 921 Score = 674 bits (1740), Expect = 0.0, Method: Composition-based stats. Identities = 337/887 (37%), Positives = 481/887 (54%), Gaps = 59/887 (6%) Query: 5 RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDI 64 RL+ L A A I P HL+ ++ QE G + +L G + +L I Sbjct: 11 RLSPVSTGMLEAAVGRAAQGQFYEIVPEHLLYGIVGQEDGDAAQILKHFGQDRLRLVGRI 70 Query: 65 NQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKR-GDNFISSELFVLAALE--SRGT 121 + L + G S+ L + + L+ G + + +L E SR T Sbjct: 71 EKVLESM--KTGNAKRPVFSEALFQWIEDAWTLSSLLYGVATLRTGHLLLQFCERASRYT 128 Query: 122 LADILKAAGATTANITQAIEQMRGGESVNDQ--------------------GAEDQRQAL 161 D + T + + + + D GA AL Sbjct: 129 AEDFPELEAIDTEVLRREFSSVVFNSNELDDVASSGGGGARSGRGAAPGEAGAPSADSAL 188 Query: 162 KKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQ 221 ++T+ LT+ A G++DP+ GR EIR+ + +L RR KNNP+++GEPGVGKTA+VEGLA Sbjct: 189 GQFTVSLTQEARDGRIDPIFGRHREIRQIVDILARRRKNNPIIVGEPGVGKTALVEGLAL 248 Query: 222 RIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELH 281 +I++G+VP+ LK ++ALDMG L AGA +GEFE+RLK V++++ +ILFIDE H Sbjct: 249 QIVSGDVPDLLKNVELIALDMGLLQAGASVKGEFEKRLKAVISEVKASPTPIILFIDEAH 308 Query: 282 TMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEP 341 T++GAG G DA N+LKPALARGEL V ATT EY++Y EKD ALERRFQ V EP Sbjct: 309 TLIGAGANKGGSDASNLLKPALARGELRTVAATTWSEYKKYFEKDPALERRFQPVKCDEP 368 Query: 342 SVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSI 401 SVED + +LRGL +YE H V I D A+VAAA LS RYI+ RQLPDKA+DL+D AA+ + Sbjct: 369 SVEDAVVMLRGLAGKYEEAHGVTIRDEAVVAAAELSGRYISGRQLPDKAVDLLDTAAARV 428 Query: 402 RMQIDSKPEELDRLDRRIIQLKLEQQAL---MKESDEASKKRLDMLNEELSDKERQYSEL 458 +++ +KP+ ++ L+ + L ++ AL + E E + L E+ ++ Sbjct: 429 KIEQGAKPQRIEELELELASLDRKRAALDRDIAEHIEVDQDAYAELLGEIESLRESVAKG 488 Query: 459 EEEWKAEKASL---------------SGTQTIKAELEQAKIAIEQARRVGDLARMSELQY 503 + W AE+ ++ + ++A E A A A Sbjct: 489 TQRWVAERDAVKAYNAACEVLREAEAAEIAKLEAPAEGEGEAQAPAEPPLVDAPAEGEGE 548 Query: 504 GKIPELEKQLEAA-----------TQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMM 552 G+ K +E + G+ L+ ++ +A+V+A WTGIPV +M Sbjct: 549 GEARAPAKSIEELRAEVEAARAAIDAIRGEEDPLVHHECDADVVAKVVANWTGIPVGKMK 608 Query: 553 ESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKT 612 +L +E L RV GQ AV VS +R + AG+ DPN PIG LF+G +GVGKT Sbjct: 609 ADTIGSVLALEDVLGSRVKGQEPAVRVVSETVRMAYAGVRDPNTPIGVLLFVGTSGVGKT 668 Query: 613 ELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYS 672 E+ +LA+ ++ D M I+MSEF EKH+VSRL+G+PPGYVGY EGG LTEAVR+RPYS Sbjct: 669 EMALSLADQLYGGDRFMTTINMSEFQEKHTVSRLIGSPPGYVGYGEGGMLTEAVRQRPYS 728 Query: 673 VILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGEL 732 V+LLDE EKA PDV N+ QV D G L DG+GRTVDFRNT++I+TSNL SD I + Sbjct: 729 VVLLDECEKADPDVMNLFYQVFDKGVLNDGEGRTVDFRNTIIILTSNLASDTIMRLYQGD 788 Query: 733 DYAHMKELVLGV---VSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEE- 788 + +E+V + VS +F+P + R+ V F P+G + + IA ++L++L +RL E Sbjct: 789 EAPATEEVVEAIRPTVSAHFKPALLARMTM-VPFRPIGPEIMREIAILKLRKLERRLRET 847 Query: 789 RGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILS 835 E SDE L L D GAR + ++ + LA+ +L Sbjct: 848 HEIETTFSDELLDELVRRCTDADTGARNVDHTLRASLMPALARTLLE 894 >UniRef50_C2D9C6 ATPase with chaperone activity, ATP-binding subunit n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D9C6_9ACTN Length = 875 Score = 674 bits (1738), Expect = 0.0, Method: Composition-based stats. Identities = 339/892 (38%), Positives = 495/892 (55%), Gaps = 99/892 (11%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 ++ T + + L AQ A ++ H++ A L E SV+ +L+S I Q Sbjct: 1 MFEQFTAQTRNILLLAQEEARSVGKLYVGTEHILLAYLKDEENSVTQVLSSFDITYAQAY 60 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGT 121 + L + G V S R L LA I+++ +A L + Sbjct: 61 EIVES-LASTGAADAASGHVPFSALTKRALAQAFTLASAHATGLITTKDLFIAMLALPES 119 Query: 122 LADI-LKAAGATTANITQAIEQMRGGESVNDQGAEDQRQ--------------------- 159 A + L G + ++++ AI+ + E + + Q Sbjct: 120 HACLVLTRIGVSFSSLSTAIDALDDSEEYSAPEDAESTQDEQDDDLTEVAYGIPSASQAR 179 Query: 160 -----ALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214 LK+Y +L A+Q KLDPVIGRD+EI R Q+L RR KNNP+++G+PGVGKTA Sbjct: 180 SKMGKLLKRYGKNLVAVAQQEKLDPVIGRDKEITRIAQILARRQKNNPLILGDPGVGKTA 239 Query: 215 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 274 +VEGLAQ I P L +++ LD+ +++AGAKYRGEFE+RLK V+N++ K N+I Sbjct: 240 VVEGLAQLIATHNAPVTLADKQIWTLDISSMLAGAKYRGEFEDRLKRVINEVRKA-TNII 298 Query: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334 LFIDE+HT++GAG A+G++DA ++LKP L+R E+ +GATT +EYR++IEKD ALERRFQ Sbjct: 299 LFIDEIHTIIGAGSAEGSIDAASILKPPLSRSEIQVIGATTAEEYRKHIEKDPALERRFQ 358 Query: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394 V V EP+V T+ IL+G LS RY Sbjct: 359 PVEVCEPTVSQTLQILKG-----------------------LSARY-------------- 381 Query: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQ 454 EA + ++ E R I L +A+ + ++K + Sbjct: 382 -EAFHHVHYTQNALVEATRLSHRYIQDRFLPDKAIDVIDEAGARKSVVK----------- 429 Query: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLE 514 + T++ L + K E+ + + ++ + LE+++ Sbjct: 430 -----------RHEPHEIVTMRTALAKLKEKKERLLAHENYEDAASVRDDE-KSLEQKIV 477 Query: 515 AATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574 A + K+ + V +IA V++ +G+PV+ + E E EKLLR EQELH R+IGQ Sbjct: 478 HAVKDWEKSRASEQQNVDVNDIARVISDISGVPVTSLTEKESEKLLRCEQELHKRLIGQK 537 Query: 575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 634 EAV V++AIRRSR+ L DP RP GSF+FLGP+GVGKTEL K+LA F+F + EA++ DM Sbjct: 538 EAVAKVAHAIRRSRSPLKDPARPGGSFIFLGPSGVGKTELAKSLAEFLFGTQEALISFDM 597 Query: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694 SEFMEKH VS+LVGAPPGYVGY++GG LT+AVRRRPYSV+L DE+EKAHPDVFNILLQ+L Sbjct: 598 SEFMEKHEVSKLVGAPPGYVGYDQGGELTKAVRRRPYSVVLFDEIEKAHPDVFNILLQIL 657 Query: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLI---------QERFGELDYAHMKELVLGVV 745 ++GRLTDGQGR VDF NTV+IMTSN+G+ I + L Y +K V + Sbjct: 658 EEGRLTDGQGRVVDFSNTVIIMTSNIGAREIAHTSPMGFSSQGDDGLSYKEIKSRVKSEL 717 Query: 746 SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSE 805 +FRPEF+NR+DE+VVF L ++ + I ++ + +L RL + + +SD A L+++ Sbjct: 718 KRSFRPEFLNRVDEIVVFTTLSKEELRKIVELMVSQLAYRLAQEHIMLTLSDAACDLIAQ 777 Query: 806 NGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857 G DP+YGARPL+R +Q+ +E+ LA+ +L + G + ++ E +V + Sbjct: 778 KGTDPIYGARPLRRTLQRLVEDRLAEDLLEHKWSAGDEVYVDAQEHELVFKK 829 >UniRef50_B6EJJ8 Chaperone ClpB-1 n=12 Tax=Proteobacteria RepID=B6EJJ8_ALISL Length = 872 Score = 674 bits (1738), Expect = 0.0, Method: Composition-based stats. Identities = 309/871 (35%), Positives = 462/871 (53%), Gaps = 37/871 (4%) Query: 5 RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDI 64 RLT + +L A + + IE H LL Q + G+ + + + Sbjct: 12 RLTPGMKASLEAAAGECVQRGHFSIEFEHWFVQLLQQPTVGWQKAVEQTGMASESILEQL 71 Query: 65 NQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESR----- 119 N L+ LP+ G S LV +L + +E VL L+ R Sbjct: 72 NNHLSSLPR--GNDSAPSLSPQLVELLKDAWMIGSLNHAQLSMNEFHVLIVLKQRIEQGA 129 Query: 120 ----------GTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLT 169 ++ L T + AL KY+ +LT Sbjct: 130 YNGALSTWIKSLSSEWLNRQSITKTASSHLSSTSMLCGKNQGMEGNMSTPALDKYSQNLT 189 Query: 170 ERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVP 229 + A G LDP+ GR EIR+ I +L RR +N+P+L+G+PGVGKTAIVEGLAQ+I++G VP Sbjct: 190 QAARNGDLDPISGRGNEIRKAIDILCRRRQNSPILVGDPGVGKTAIVEGLAQQIVDGNVP 249 Query: 230 EGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKA 289 LK + LD+ L AGA +GEFE RLK V+N++ + +I+FIDE HT++GAG A Sbjct: 250 PALKNVELRNLDLSLLQAGASIKGEFENRLKDVINEIKQSATPIIVFIDEAHTLIGAGGA 309 Query: 290 DGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAI 349 G DA N+LKPALARGE + ATT EY+QY E DAAL RRFQ V + EPS D I + Sbjct: 310 AGQNDAANILKPALARGEFRSIAATTWAEYKQYFESDAALSRRFQVVSIGEPSEGDAIHM 369 Query: 350 LRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKP 409 L G+K E HH+V++ AI AA +LS RY+ +R+LPDKAI L+D A S I + + P Sbjct: 370 LSGVKTCLEKHHNVKVMQEAINAAVSLSIRYLPERKLPDKAISLLDTACSRIGLSQSAPP 429 Query: 410 EELDRLDRRIIQLKLEQQALMKESD--EASKKRLDMLNEELSDKERQYSELEEEWKAEKA 467 +L+ + +I ++ E L E+ RL+ + + L D + Q+ E+ + W+ EK Sbjct: 430 RQLEAVAEQICYVENEITTLNHEAALWSIDDDRLEQVQQRLIDLQEQHQEIGKCWEQEKT 489 Query: 468 SLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLL 527 + ++ +L++ + + D L L+ Sbjct: 490 LVEEIIVLQTKLDEQFLNGDDLSENEDKF------------LLAIKMTELHAIQDDQPLV 537 Query: 528 RNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRS 587 +V + IAEV++ WTGIPV M++ E E L+ +E+ + RVIGQ + +S AIR S Sbjct: 538 LPQVNEQTIAEVISLWTGIPVGNMLKEEVEHLMHLEKHIGERVIGQIAPIAEISKAIRMS 597 Query: 588 RAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLV 647 RAGL D +P+G FL GP+GVGKTE AL + ++ + I+M+EF E+H VS L+ Sbjct: 598 RAGLTDLRKPVGVFLMCGPSGVGKTETALALTDLLYGGKRNITTINMTEFKEEHKVSTLL 657 Query: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTV 707 G+P GYVGY +GG LTEAVR+ PYSV+LLDE+EKAHP V +I Q+ D G ++D +GR V Sbjct: 658 GSPAGYVGYGKGGVLTEAVRKNPYSVLLLDEMEKAHPGVHDIFYQIFDKGSISDSEGREV 717 Query: 708 DFRNTVVIMTSNLGSDLIQERFGELDY--AHMKELVLGVVSHNFRPEFINRIDEVVVFHP 765 DFRNT++IMTSN + + + + + + + + F+P F+ R +V + P Sbjct: 718 DFRNTIIIMTSNAADSAVVNGCADGRPSISILTKAIFPELQNFFKPAFLGR-TTIVPYFP 776 Query: 766 LGEQHIASIAQIQLKRLYKRLEER-GYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQ 824 L ++ ++ IAQ+ L+R+ KR+++ + ++LL P GAR +++ I +Q Sbjct: 777 LNDEEMSKIAQLSLRRIEKRIKQHYNATFDYDTQVIELLVSMNQSPETGARAIEQLINRQ 836 Query: 825 IENPLAQQILSG--ELVPGKVIRLEVNEDRI 853 + LA Q + + P + L VN ++ Sbjct: 837 LMPELANQCIVRMSQSQPISEVLLTVNGNKF 867 >UniRef50_C9XYK6 Chaperone protein clpB n=1 Tax=Cronobacter turicensis RepID=C9XYK6_CROTZ Length = 924 Score = 672 bits (1734), Expect = 0.0, Method: Composition-based stats. Identities = 310/878 (35%), Positives = 464/878 (52%), Gaps = 48/878 (5%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +L ++ A + N ++E +H ++ + +QE + + +++ L Sbjct: 40 FSKLGETLFRSIESATTFCKLRGNPYVELVHWINQIWHQEDNDLKHIARYFNVDSEGLER 99 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQ-KRGDNFISSELFVLAALESRGT 121 ++ +L RLP D S + + +R +N I S ++A L + Sbjct: 100 GLSYSLERLPGSATAVSD--FSYLIELAIERAWIYTSLERCENKIRSGHLLMALLTTVEL 157 Query: 122 LADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQA--------------------- 160 +L A + + + + + +++ Sbjct: 158 RRALLAVAAPLEKVVLEQLSHDFDYITRHSPEVQERESPPFLSSQSAVPGEASGAIKLQS 217 Query: 161 ---LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVE 217 L +Y+ D+T A +GK+DPV+GRD EI I +L RR +NNP+L G+ GVGKTA+VE Sbjct: 218 TGSLAQYSTDVTALAREGKIDPVLGRDREISTIIDILLRRRQNNPLLTGDAGVGKTAVVE 277 Query: 218 GLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFI 277 GLA I G+VP L R+L+LD+ AL AGA +GEFE RLK VL + A E VILF+ Sbjct: 278 GLACAISRGDVPPSLCDVRLLSLDIVALSAGASMKGEFEARLKAVLEEAASSEQPVILFV 337 Query: 278 DELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVF 337 DE+H ++GAG + G DA N+LKPALARG+L +GATT E++++IEKD AL RRFQ + Sbjct: 338 DEIHNLIGAGNSAGTGDAANLLKPALARGQLRTIGATTWSEFKRHIEKDPALTRRFQVLQ 397 Query: 338 VAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEA 397 V EP +LRG+ ELHH+V I D A+ AA LSHR+I RQLPDKAI L+D A Sbjct: 398 VEEPDENSATDMLRGMVPVLELHHNVWILDEALRAAVKLSHRFIPSRQLPDKAISLLDTA 457 Query: 398 ASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESD--EASKKRLDMLNEELSDKERQY 455 + + + + P L L +I + K S + + +D L + + ++ Sbjct: 458 CARVAVGQHTPPYVLQELKYQIESANRQLSLATKASTFGKEDQASIDTLKSVIKLRSKEA 517 Query: 456 SELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEA 515 + LE W EK S+S +A L+ E R E + E+E QL A Sbjct: 518 NSLESRWLQEKTSVSEIIAARATLQHLCQNEEVDRAER------EALQQALLEIEAQLNA 571 Query: 516 ATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNE 575 + ++ +V+ +A +++ WTGIPV +M++ E + + L RV GQ Sbjct: 572 IRHEQA----MVHTEVSAEVVAAIVSEWTGIPVGQMLQDEMNIVRELPVRLAERVTGQTF 627 Query: 576 AVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMS 635 A+ +S I +R GLADP RP G F+ GP+G GKTE A+A M+ + ++ I+MS Sbjct: 628 ALKQISERILMARTGLADPVRPTGVFMLTGPSGTGKTETALAIAENMYGGEHNLITINMS 687 Query: 636 EFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLD 695 E+ E H+VS L G+PPGYVGY EGG LTEAVRR+PYSVILLDE+EKAHPDV + QV D Sbjct: 688 EYQEAHTVSALKGSPPGYVGYGEGGILTEAVRRKPYSVILLDEIEKAHPDVHELFFQVFD 747 Query: 696 DGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKE----LVLGVVSHNFRP 751 GR+ DG+GR +DFRNT++++TSN+GS+ I + + +E L+ + F Sbjct: 748 KGRMEDGEGRLIDFRNTIILLTSNVGSEKISLLCRDENTVPDEEGLLTLLHNDLLKVFPA 807 Query: 752 EFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRL-EERGYEIHISDEALKLLSENGYDP 810 F+ R+ V+ + PL + I ++QLKR+ RL E + +DEA++ + E + Sbjct: 808 AFLGRVT-VIPYLPLKSDALMLIVKMQLKRVANRLYENHNVTLQYNDEAVRYIVEQCHVA 866 Query: 811 VYGARPLKRAIQQQIENPLAQQILSGELVP---GKVIR 845 GAR L R I+Q+I + ++ L G IR Sbjct: 867 ETGARILIRYIEQKIIPKIGGILMDSALKARLLGVTIR 904 >UniRef50_C6HYE9 ATPase AAA-2 domain protein n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HYE9_9BACT Length = 890 Score = 671 bits (1731), Expect = 0.0, Method: Composition-based stats. Identities = 344/875 (39%), Positives = 510/875 (58%), Gaps = 42/875 (4%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 R++ A+ L L + I P H++ +LL+ V +L + GI+ G +R Sbjct: 10 FRRMSPILTRAVEQGAGLCLSRSHYEITPEHVVISLLDHPDSDVMKILAAEGIDGGSVRR 69 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQ-KRGDNFISSELFVLAALE---- 117 +++ AL+ L G GG S L+ VL +A R + S +F+ A + Sbjct: 70 EMSNALDDLR--SGNGGRPVFSPLLIEVLQDAHLIASINRNEPHTRSGVFLQAFVNRLSA 127 Query: 118 -SRGTLADILKAAG-----ATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTER 171 S G + L+ G + + GG + +G ++ A+ ++ D TE+ Sbjct: 128 YSSGRPSKSLERIGKERLKDQFDTLASGSAEAIGGGQESQEGPSEEGTAIGRFCEDFTEK 187 Query: 172 AEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEG 231 A +GK+DPV GRD E+R+ I +L RR KNNP+ +G+PGVGKTA+VE LA RI+ G+VPE Sbjct: 188 ARKGKIDPVFGRDAEVRQIIDILSRRRKNNPICVGDPGVGKTAVVESLALRIVEGDVPES 247 Query: 232 LKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADG 291 L R+L LDMGAL AGA +GEFE RLKGV+N++ VILFIDE HT++GAG A G Sbjct: 248 LSKVRLLGLDMGALEAGAGVKGEFENRLKGVINEIKASSVPVILFIDEAHTLIGAGGAQG 307 Query: 292 AMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILR 351 DA N+LKPALARGEL + ATT EY++Y EKDAAL RRFQ V + EPSVE I ILR Sbjct: 308 GGDAANLLKPALARGELRTIAATTWAEYKKYFEKDAALARRFQPVKLDEPSVETAILILR 367 Query: 352 GLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEE 411 GLK YE HHV I D A+VAAATLS RY+ R+LPDKA+DL+D +A+ IR+ SKPE+ Sbjct: 368 GLKAHYEAVHHVTIRDDALVAAATLSDRYLTGRKLPDKAVDLLDTSAARIRISQSSKPEK 427 Query: 412 LDRLDRRIIQLKLEQQALMKESDEASK---KRLDMLNEELSDKERQYSELEEEWKAEKAS 468 ++ L+RRI L+ E+ L+++ +RLD + EL E++ S E W+ EK + Sbjct: 428 IEGLERRIQALEREKNGLVRDQTFGQDIPAERLDAIGRELGTLEQELSRQRERWEKEKTA 487 Query: 469 LSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLR 528 ++ + D R + + EL + A +++ ++ Sbjct: 488 VAELLAHRE----------------DPRREGPDRESWMKELRTKEAAVRKIQEDH-PMIH 530 Query: 529 NKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSR 588 +V +A V++ WTGIP+ +++ + + ++R+++ L RV+GQ A+ V IR SR Sbjct: 531 FEVDPETVARVVSNWTGIPLGKLLREQAQTVMRLQETLGERVLGQEPALARVGEIIRNSR 590 Query: 589 AGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVG 648 AG PN+P+G FL +GP+GVGKTE A+A+ +F ++A V ++MSEF EKH SRL+G Sbjct: 591 AGFKAPNQPVGIFLLVGPSGVGKTETALAVADILFGDEKATVTLNMSEFQEKHQASRLIG 650 Query: 649 APPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVD 708 +PPGYVGY EGG LTEAVR+RPYSV+LLDEVEKAHPD+ N+ QV D G L+DG+G+ +D Sbjct: 651 SPPGYVGYGEGGLLTEAVRQRPYSVVLLDEVEKAHPDILNMFYQVFDKGVLSDGEGKEID 710 Query: 709 FRNTVVIMTSNLGSDLIQERF---GELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHP 765 F NTV+ +TSNL S+ + E Y + L+ +S +F+P + R+ +V + P Sbjct: 711 FSNTVIFLTSNLASEKLSAYALEHPEASYEDLVTLIRPDLSRHFKPALLARMT-IVPYLP 769 Query: 766 LGEQHIASIAQIQLKRLYKRL-EERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQ 824 L + + I +++ KRL + + G EI D + ++ GAR + +Q + Sbjct: 770 LRGEALGRIVRLKTKRLSRSFVQNNGVEIVFEDSLIDHVALQCETSEAGARNIDYLLQSR 829 Query: 825 IENPLAQQILSGELVPGKV---IRLEVNEDRIVAV 856 I ++++++ G LV G + +R+ + D + Sbjct: 830 ILPEISRELI-GRLVEGTLDGPVRVGIAPDGTTVI 863 >UniRef50_Q2S2Z0 ATP-dependent Clp protease, ATPase subunit n=63 Tax=Bacteria RepID=Q2S2Z0_SALRD Length = 875 Score = 671 bits (1731), Expect = 0.0, Method: Composition-based stats. Identities = 330/883 (37%), Positives = 496/883 (56%), Gaps = 95/883 (10%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 +N+ + ++ ++ A+ + +I HL+ L+ + G +L + G + +L+ Sbjct: 1 MEGNFSNRVRDVISYSREEAVRLGHDYIGTEHLLLGLIREGDGIAVKILRNLGCDLLELK 60 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGT 121 + + R + G++ ++ +VL + A+ + I +E +L+ L Sbjct: 61 EAVEDTV-RSTSSSTSVGNIPLTKQAEKVLKITYLEAKLYKSDVIGTEHLLLSLLRDDEN 119 Query: 122 LADILKAAGATTA----------------------NITQAIEQMRGGESVNDQGAEDQRQ 159 +A + G + + G + + Sbjct: 120 IAAQILQQGFSVTYDAVRNELDSIISGKASSSSSGSGGSGGRLSSGYGQESSESENSNTP 179 Query: 160 ALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGL 219 L + DLTE AE+ +LDP+IGR+EEI+R Q+L RR KNNPVLIGEPGVGKTAI EGL Sbjct: 180 VLDNFGRDLTELAEEDELDPIIGREEEIKRVAQILSRRKKNNPVLIGEPGVGKTAIAEGL 239 Query: 220 AQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDE 279 A RI++ +V L +R++ LD+ +LVAG KYRG+FEER+K V+ +L + ++ILFIDE Sbjct: 240 AARIVDRKVSRVLYDKRIVTLDLASLVAGTKYRGQFEERMKAVMKELEDND-DIILFIDE 298 Query: 280 LHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVA 339 +HT+VGAG A G++DA NM KPALARG+L C+GATTLDEYRQ IE D AL+RRFQK+ V Sbjct: 299 IHTIVGAGGASGSLDASNMFKPALARGDLQCIGATTLDEYRQNIEGDGALDRRFQKIIVD 358 Query: 340 EPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAAS 399 + E+T+ IL +K YE HH+V+ ++ AI A LS RYI DR LPDKAID++DEA + Sbjct: 359 PSTPEETVNILSNIKSYYEDHHNVRFSEEAIDLAVQLSDRYITDRFLPDKAIDVMDEAGA 418 Query: 400 SIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELE 459 + + P E+ L+ +I ++ E+ ++K R L ++ + + E + Sbjct: 419 RVHLSNIEVPPEILELEEQIEDVQEEKNQVVKSQRFEEAAR---LRDKEKTLQEELEEAK 475 Query: 460 EEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQL 519 ++W + + + + + + ++SE + K+ ++E+ L+ Sbjct: 476 QQWHEQAET-----EVHDVTSEEIAEVVAMMTGIPVDKISEPEQQKLLKMEESLKEHVVG 530 Query: 520 EGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDA 579 + + + L + Sbjct: 531 QDEAIEKLSKAIRRT--------------------------------------------- 545 Query: 580 VSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFME 639 RAGL DP +PIGSF+FLGPTGVGKTEL K L ++FDS E+++RIDMSE+ME Sbjct: 546 --------RAGLKDPEKPIGSFIFLGPTGVGKTELAKVLTEYLFDSQESLIRIDMSEYME 597 Query: 640 KHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRL 699 K SVSRLVGAPPGYVG+EEGG LTE VRR+PYSV+LLDE+EKAHPDV NILLQVLDDG L Sbjct: 598 KFSVSRLVGAPPGYVGHEEGGQLTEKVRRKPYSVVLLDEIEKAHPDVSNILLQVLDDGIL 657 Query: 700 TDGQGRTVDFRNTVVIMTSNLGSDLIQE----------RFGELDYAHMKELVLGVVSHNF 749 TDG GR VDFRNT++IMTSN+G+ I+ ++DY MK V + + F Sbjct: 658 TDGMGREVDFRNTILIMTSNIGTQDIKSFGQGIGFDQTDGEDMDYTSMKSTVQDALKNVF 717 Query: 750 RPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYD 809 PEF+NR+D+V+VF+PL +++I I I + L++R EE G ++ + A + L++ G+D Sbjct: 718 NPEFLNRLDDVIVFNPLNKENIFDIIDIMSEDLFERAEELGLDLEFDEAAKEFLTDRGFD 777 Query: 810 PVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDR 852 YGARPL+RA+Q+ +++P+A+ IL E+ G + + + + Sbjct: 778 QKYGARPLRRALQKYVQDPMAEDILHDEITEGDTVLITHDGES 820 >UniRef50_Q21KI1 ATPase AAA-2 n=7 Tax=Gammaproteobacteria RepID=Q21KI1_SACD2 Length = 897 Score = 671 bits (1730), Expect = 0.0, Method: Composition-based stats. Identities = 318/880 (36%), Positives = 502/880 (57%), Gaps = 36/880 (4%) Query: 1 MRLDRL----TNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGIN 56 M ++L +N+ + + +LA + +I+ H ++ L +E + +L ++ Sbjct: 12 MEFEKLVKNLSNESKELFEKSIALASSRSHFYIDVEHWLTEALAEEQREIIAILKHFNVD 71 Query: 57 AGQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQ-KRGDNFISSELFVLAA 115 ++ D++ AL G G + S D+VR+L +A + + +LA Sbjct: 72 VDRVHADLDLALEN--TKTGNDGFPKISPDIVRLLFEAWMIASSQYASVQVLPVHILLAL 129 Query: 116 LESRGTLADILK----AAGATTANITQAIEQMRGGESVNDQGAEDQR-----QALKKYTI 166 ++S G I K + I E + GE++ DQG + +L ++T Sbjct: 130 VDSAGLKTKIGKISKQFEAISGEEIRTQCETLLRGEALQDQGEATNKKLTKTPSLDQFTT 189 Query: 167 DLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIING 226 +LT++A+ GK+D ++GRD+EIR+ I VL RR +NNP+L GE GVGKTA+VEGLA +I G Sbjct: 190 NLTQQAKDGKIDSILGRDDEIRQIIDVLCRRKQNNPILTGEAGVGKTAVVEGLAVKIAQG 249 Query: 227 EVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGA 286 +VP ++ + +LD+G L AGA +GEFE RLK V+ ++ + ++ILFIDE HT++GA Sbjct: 250 DVPTAIENVEIRSLDLGLLQAGAGVKGEFENRLKNVIKEVQQSVQSIILFIDEAHTLIGA 309 Query: 287 GKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDT 346 G G+ DA N+LKPALARGEL + ATT EY++Y E DAAL RRFQ V V EPSV+ Sbjct: 310 GNQAGSGDAANLLKPALARGELRTIAATTWAEYKKYFESDAALTRRFQVVKVEEPSVDKA 369 Query: 347 IAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQID 406 I +LR E HH V I D A+ A+ LSHRYI RQLPDK + L+D A + + + + Sbjct: 370 IIMLRNAAPTLEQHHKVVILDAAVSASVNLSHRYIPGRQLPDKCVSLLDTACARVNLSQN 429 Query: 407 SKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLD--MLNEELSDKERQYSELEEEWKA 464 + P + + + I ++ E + L +E+++ + L + +Y L W+ Sbjct: 430 TTPARIVQYSQEIKNIEFEIERLNQEAEKGYEHSASIVELEVKKVGITERYQSLCARWEQ 489 Query: 465 EKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTM 524 EK ++ + + + E E+ + + ++L I EL +L++ + + Sbjct: 490 EKQIINQINSAREKAE------EKVQDSDNEESATDLTNTLIAELRVKLKSIS----GSQ 539 Query: 525 RLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAI 584 L+ V + +AEV+A WTGIPV RM E + +L +EQ + RVIGQ+ + +S A+ Sbjct: 540 PLIYECVDEQVVAEVVADWTGIPVGRMQSDEIQNVLSLEQTMEKRVIGQSHGLKLISKAV 599 Query: 585 RRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVS 644 + +RA L+DP RP+G F+ +GP+GVGKTE LA ++ S++ M I+MSEF E+H VS Sbjct: 600 QTARAKLSDPKRPLGVFMLVGPSGVGKTETALTLAEQLYGSEQNMTVINMSEFKEEHKVS 659 Query: 645 RLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQG 704 L+G+PPGYVGY EGG LTEAVRR+PYSV+LLDE+EKAHP V +I QV D G L DG+G Sbjct: 660 MLMGSPPGYVGYGEGGVLTEAVRRKPYSVVLLDEMEKAHPGVQDIFYQVFDKGILRDGEG 719 Query: 705 RTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK----ELVLGVVSHNFRPEFINRIDEV 760 R +DF+NTV+IMTSN S I++ + + E + G + ++P F+ RI+ + Sbjct: 720 RDIDFKNTVIIMTSNTASAQIEQLCIDPETKPEPKALLEAIEGTLRETYKPAFLGRINLI 779 Query: 761 VVFHPLGEQHIASIAQIQLKRLYKRLE-ERGYEIHISDEALKLLSENGYDPVYGARPLKR 819 ++PL EQ ++ IA +QL + +R+E E++ SD+ ++ + GAR + Sbjct: 780 -PYYPLDEQCLSEIAVMQLHAIQQRVETNYKVELNYSDKLVEHVVSLCAQSDTGARKISA 838 Query: 820 AIQQQIENPLAQQILSGEL--VPGKVIRLEVNEDRIVAVQ 857 + + LA++IL+ + + ++V+E+ V+ Sbjct: 839 LLNNTLLPVLAEKILTEIALDKALESVEVDVSEEGEFVVK 878 >UniRef50_B7FUC8 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FUC8_PHATR Length = 768 Score = 670 bits (1729), Expect = 0.0, Method: Composition-based stats. Identities = 378/710 (53%), Positives = 514/710 (72%), Gaps = 8/710 (1%) Query: 149 VNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEP 208 + + G Q L+++T+DLT +A KLDP+IGR EEIRR +Q+L RRTKNNPVLIGE Sbjct: 1 MTNAGPPKPGQYLEQFTVDLTNQAADNKLDPIIGRHEEIRRCLQILARRTKNNPVLIGEA 60 Query: 209 GVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAK 268 GVGKTAI EGLAQRI +GEVPE +K +RVL+LD+ AL AGA RG+FEERLKGV+ D+ + Sbjct: 61 GVGKTAIAEGLAQRIHSGEVPESMKDKRVLSLDIAALTAGAMMRGQFEERLKGVVKDVEQ 120 Query: 269 QEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAA 328 EG VILFIDE+HT+VGAGKA+G MD NMLKPALARG+L VGATTL+E+R +EKDAA Sbjct: 121 AEGKVILFIDEIHTIVGAGKAEGGMDMSNMLKPALARGDLQLVGATTLNEFR-ILEKDAA 179 Query: 329 LERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPD 388 L RRFQ V+VAEPSVED+++ILRGLK YELHH ++I D A+VAAATLS RYIADR+ PD Sbjct: 180 LARRFQSVYVAEPSVEDSLSILRGLKTAYELHHGIRIKDEALVAAATLSDRYIADRKQPD 239 Query: 389 KAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASK--KRLDMLNE 446 K+IDL+DEA S +R++ +SKPE + +++R ++ ++E+ AL E D K R + Sbjct: 240 KSIDLVDEACSRLRLEQESKPEIIWKVERDLLTRQIERSALENEDDSDDKVATRRKQVER 299 Query: 447 ELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKI 506 E+S+ + + L E W AEK L+ QT+K +LE+A+ +E ARR GD A+ EL + I Sbjct: 300 EVSELKTEVGRLTELWMAEKNELNRVQTVKGDLEKARADMEAARRQGDYAKAGELMHATI 359 Query: 507 PELEKQLEAATQ--LEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQ 564 P LE + EA E K ++L + VT IA ++AR TGIPVSR+ +E +KLL +E Sbjct: 360 PNLEHEFEALESTVDEHKKTKMLADSVTAEAIATIIARHTGIPVSRIAGNESQKLLHIED 419 Query: 565 ELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFD 624 +L RV+GQ+ A++AV + +R +R L +R +G+FLFLGPTGVGKTE KALA+F+FD Sbjct: 420 KLRERVVGQDHALEAVGDCVRLARTRLQAQDRTLGNFLFLGPTGVGKTETAKALAHFLFD 479 Query: 625 SDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHP 684 +AM RIDMSE+ EKH+VSRL+GAPPGYVGYEEGG LTE+VRRRPY V+LLDE EK H Sbjct: 480 DQDAMTRIDMSEYGEKHTVSRLIGAPPGYVGYEEGGVLTESVRRRPYQVLLLDEFEKGHR 539 Query: 685 DVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFG--ELDYAHMKELVL 742 +V+N+LLQ+ D+G LTD GR VDFRN +VIMTSNLG+ +I E + H+ + ++ Sbjct: 540 EVWNLLLQLFDEGHLTDSHGRKVDFRNVIVIMTSNLGAQIIAELPAQLKGSEPHVHDTIM 599 Query: 743 GVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEE-RGYEIHISDEALK 801 VV + PE +NRID+ +VF+ L +++ +IA++ +K + KRLE+ + + +S A Sbjct: 600 EVVRQSLSPELLNRIDDTIVFNRLQRENMDTIAEMGIKEIEKRLEDGQNMSLDVSSTATA 659 Query: 802 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNED 851 +++E GYD YGARPLKR + + + NPL++ +L G ++ G +++ + Sbjct: 660 VIAEMGYDVRYGARPLKRTLAKTLLNPLSRLVLEGAVMEGDTVKVRTRGE 709 >UniRef50_Q2SEG4 ATPase with chaperone activity, ATP-binding subunit n=63 Tax=Bacteria RepID=Q2SEG4_HAHCH Length = 919 Score = 668 bits (1723), Expect = 0.0, Method: Composition-based stats. Identities = 315/876 (35%), Positives = 488/876 (55%), Gaps = 30/876 (3%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 ++ T+ + +L D LA + +E H++ +L Q + +L G++ G++ Sbjct: 10 IEPTTSVVRKSLEDGLRLAQQERHSSLEIEHVLLKVLEQSDSDLDRVLEQLGVDIGKVSR 69 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQ-KRGDNFISSELFVLAALESRGT 121 +++Q + + + V S +V L LA + G NFISS A + Sbjct: 70 ELSQTVGKF-HRDNPRDMVPFSPLVVDALKAGWLLASVEMGVNFISSAHLFAAVMSHNTM 128 Query: 122 LADILKAAGATTANITQAIEQMRGGESVNDQGAED----------------QRQALKKYT 165 +L + + + + + Q AL+KYT Sbjct: 129 RNQLLSSVKTLQEISLEKVLPAVKAVTGQSSESRAYLKAAAGGGAPAAPTAQGGALQKYT 188 Query: 166 IDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIIN 225 ++LTERA ++DPV+GRD EIR+ I +L RR +NNP+L GE GVGKTA+VEGLA RI Sbjct: 189 VNLTERALNNEIDPVLGRDPEIRQCIDILTRRRQNNPILTGEAGVGKTAVVEGLALRIAQ 248 Query: 226 GEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVG 285 +VPE L+G + LD+G L AGA +GEFE+RLK V+ ++ +I+FIDE HTM+G Sbjct: 249 KDVPEPLQGVHIHVLDLGLLQAGASMKGEFEQRLKSVIEEVKASPAPIIMFIDEAHTMIG 308 Query: 286 AGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVED 345 AG +G DA N+LKPALARGEL + ATT EY++Y E+D AL RRFQ V V EP+ Sbjct: 309 AGGKEGQGDAANLLKPALARGELRTIAATTWAEYKKYFERDPALTRRFQVVKVEEPTEAV 368 Query: 346 TIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQI 405 I +LRG+ + +HH+V+I+D AI+ A LS RYI RQLPDK + L+D A + + + Sbjct: 369 AIDMLRGISKILAIHHNVRISDDAIIQAVKLSARYIPGRQLPDKGVSLLDTACARVSLSQ 428 Query: 406 DSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRL--DMLNEELSDKERQYSELEEEWK 463 + P ++ RRI Q+ + +E+ + + ++L EE + E + E+W+ Sbjct: 429 SATPSLIEDTRRRIQQIDTNLDLISQENISSGEYHETLELLTEEKAVLEASLAAQTEQWE 488 Query: 464 AEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKT 523 EK ++ ++ +LEQ A + GD R+S+ + ++ K L AA Sbjct: 489 KEKDLIAKILEVRTKLEQDYQAKKGPEDAGD--RLSDEEVAELQVEFKNLFAALASAQGD 546 Query: 524 MRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNA 583 L+ V +AEV+A WTGIPV +M+ E +L + ++L RVIGQ+ A++A++ A Sbjct: 547 QPLMMPHVDGQAVAEVVANWTGIPVGKMVSDEINGILNLHEQLEKRVIGQSHALEAIAQA 606 Query: 584 IRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSV 643 IR SRAGL DP +PIG FL +GP+GVGKTE ALA+ +F ++ + I+M+EF E+H V Sbjct: 607 IRTSRAGLTDPRKPIGVFLMVGPSGVGKTETALALADTLFGGEQNLTVINMAEFKEEHKV 666 Query: 644 SRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQ 703 S L+G+PPGYVGY EGG LTEA RR+PYSVILLDE+EKAH V ++ + D G + DG+ Sbjct: 667 SMLLGSPPGYVGYGEGGVLTEAARRKPYSVILLDEMEKAHQGVQDVFYNLFDKGSIKDGE 726 Query: 704 GRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVL----GVVSHNFRPEFINRIDE 759 GR +DF+NTV+IMTSN G + I+ + + +++L + F+P F+ R Sbjct: 727 GRDIDFKNTVIIMTSNAGEEAIRAICAQSEEKPEPDVMLDSMRHELLKYFKPAFLGR-AN 785 Query: 760 VVVFHPLGEQHIASIAQIQLKRLYKRLEER-GYEIHISDEALKLLSENGYDPVYGARPLK 818 V+ ++PL ++++ I +I + R+ +R+ G ++ L + + GAR ++ Sbjct: 786 VITYYPLDDENLFKICRINMDRIARRVRNHYGAAFTYDEDVLLNIVARSQEVDTGARNIE 845 Query: 819 RAIQQQIENPLAQQILSGELVPG--KVIRLEVNEDR 852 + + + L+ + LS + I + E+ Sbjct: 846 HILNRTVLPELSTECLSRLANGEHIEHIHISATEEG 881 >UniRef50_Q046D3 ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones n=59 Tax=Firmicutes RepID=Q046D3_LACGA Length = 838 Score = 667 bits (1720), Expect = 0.0, Method: Composition-based stats. Identities = 336/876 (38%), Positives = 502/876 (57%), Gaps = 87/876 (9%) Query: 2 RLDR-LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 R+++ ++ + L A+ A ++ I H++ AL+ + G LL + + Sbjct: 16 RMEKSYSDSAKNVLEIAKEQAQNFHHRIIGTEHVLLALVIEANGDAGKLLRERNVTPTLV 75 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG 120 R +I + + T + S L VLN + + + G I ++ +L L S Sbjct: 76 REEIERYTGYGSSPKATYME--MSPRLSLVLNFAKQKSDELGTPQIETKHILLGLLASDQ 133 Query: 121 TLAD-ILKAAGATTANIT------------QAIEQMRGGESVNDQGAEDQRQALKKYTID 167 LA ILK G +++ +A + + + L K +++ Sbjct: 134 ILASLILKNIGVEPRDLSQDINDSFMDDSGEANNIFDVSSATRTKKGKSLTPNLDKVSVN 193 Query: 168 LTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGE 227 L +RA +G +DPVIGRD+EI+R IQ+L RRTKNNPVL+GEPGVGKTA+ +G+A I+N E Sbjct: 194 LNKRAREGAIDPVIGRDKEIKRVIQILSRRTKNNPVLVGEPGVGKTAVAQGIASAIVNRE 253 Query: 228 VPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAG 287 VP+ L +RV+ALDMG+L+AG KYRGEFE+R+K +L ++ +++G+VILF+DE+HT++GAG Sbjct: 254 VPDNLAKKRVMALDMGSLIAGTKYRGEFEDRMKKILKEI-QRDGSVILFVDEMHTLIGAG 312 Query: 288 KADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTI 347 A+GA+DA N+LKP+LARG++ +GATT DEY++YIEKD AL RRFQ+V + EPS E+T+ Sbjct: 313 GAEGAIDASNILKPSLARGDIQMIGATTFDEYQKYIEKDQALARRFQQVKIGEPSKEETV 372 Query: 348 AILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQI-D 406 IL+GL+ +YE H+V+I D AI A S RYIA+R LPDKAIDLIDEA++++++Q Sbjct: 373 DILKGLRPKYEKFHNVKIEDEAIKDAVEFSTRYIANRFLPDKAIDLIDEASAAVKIQAVG 432 Query: 407 SKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEK 466 L +LD +I + +++ + + +L +L+ + E ++K Sbjct: 433 KADPRLTKLDTQINDVIHQKEEAAENQNFVQAAKLRDEENKLTQDRDKLIARVENKNSKK 492 Query: 467 ASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRL 526 + + I + RM + + ++ LE L + K + Sbjct: 493 SIVDS---------NKIAQIVSEWTGVPVTRMKKSETKRLAHLESILHERVIGQDKAISA 543 Query: 527 LRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRR 586 + + Sbjct: 544 VSRAIRR----------------------------------------------------- 550 Query: 587 SRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRL 646 SR+G+ D NRPIGSFLFLGPTGVGKTEL KALA +F S+ ++R+DMSE+M++ + S+L Sbjct: 551 SRSGIKDENRPIGSFLFLGPTGVGKTELAKALAAAVFGSERNIIRVDMSEYMDQVATSKL 610 Query: 647 VGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRT 706 +G+ PGYVGYEEGG L+E VRR PYSVILLDEVEKAHPDVFN+LLQVLD+G LTD +GR Sbjct: 611 IGSAPGYVGYEEGGQLSERVRRNPYSVILLDEVEKAHPDVFNLLLQVLDEGFLTDSKGRK 670 Query: 707 VDFRNTVVIMTSNLGSDLIQERF-------GELDYAHMKELVLGVVSHNFRPEFINRIDE 759 VDFRNT++IMTSNLGS +QE E +E V V FRPEF+NRIDE Sbjct: 671 VDFRNTIIIMTSNLGSRSLQEDKTVGFAADNEDKNKLQQEKVTAAVKQFFRPEFLNRIDE 730 Query: 760 VVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKR 819 VVF L ++ + I + L RL + + IS AL +L+++G+DP GARPL+R Sbjct: 731 TVVFDSLTKKQLREIVSLMTSHLISRLARKEVTLKISPAALDVLAKDGFDPEMGARPLRR 790 Query: 820 AIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855 AIQ ++E+ +A+ ++S ++ G+ +++ ++ ++ Sbjct: 791 AIQHELEDVIAEDLISEKIKAGQTVKVGAHQGKLKF 826 >UniRef50_A7APH1 Clp amino terminal domain containing protein n=1 Tax=Babesia bovis RepID=A7APH1_BABBO Length = 1005 Score = 667 bits (1720), Expect = 0.0, Method: Composition-based stats. Identities = 304/905 (33%), Positives = 484/905 (53%), Gaps = 63/905 (6%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 + + ++ L +Q A + IE H++ L+ + G S +L+ G+ + +L Sbjct: 74 LNFNNFSDDAVKVLMLSQEEAKRGAVKQIEIKHILLGLVAVQRGIASNVLSHFGVTSKKL 133 Query: 61 RTDINQALNRL--PQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES 118 R I+ + P + ++ SQ+ L L A+ G+ + +E +L L + Sbjct: 134 RDVIDNLEDNTIPPDDKNEDYNLIFSQESKNALQLSSIEAESMGNKTLETEHILLGMLGT 193 Query: 119 RG-TLADILKAAGAT----------------------------TANITQAIEQMRGGESV 149 T IL A ++Q G S Sbjct: 194 HSYTFRQILDALTVNIDAMRNLTLKYIAEEKEKPAEEMPTDTWKQALSQYTYIPTPGRSE 253 Query: 150 NDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPG 209 + Q L +TID+T +AE+GKL V+ RD EI R+I+ L R+ K NP+LIGEPG Sbjct: 254 DILRDTYQVSPLNAFTIDITRKAEEGKLQKVLCRDSEIDRSIRTLCRKYKRNPILIGEPG 313 Query: 210 VGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQ 269 VGKTA+VEG+A ++ G V E + +R+ LD+G LVAGA++RG+FEERL ++ ++ Sbjct: 314 VGKTAVVEGIAMQLREGHVLEKMLNKRLRQLDVGLLVAGARFRGQFEERLTRLIEEIKNA 373 Query: 270 EGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAAL 329 + N+IL IDE H +VGAG +GA+DA N+LKP LARGE+ C+ TT EY+++ EKDAAL Sbjct: 374 K-NIILVIDEAHMLVGAGAGEGALDAANLLKPTLARGEIQCIAITTPKEYQKHFEKDAAL 432 Query: 330 ERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDK 389 RRFQ + V EPS +DT IL E H+V+ A+ AA S ++I +R LPDK Sbjct: 433 CRRFQPIHVKEPSDKDTQIILNATAEACGRFHNVKYNMDAVAAALKYSKQFIPERYLPDK 492 Query: 390 AIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELS 449 AID++DEA S +++ QLK+E + + E + N + Sbjct: 493 AIDILDEAGSLAKIR-------------FYEQLKVEWKHAVNPLKERGVYDVLTSNFAKN 539 Query: 450 DKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPEL 509 K + + + AK+ + + ++ I E Sbjct: 540 ANNEAIESDVHSSKVSTQHSEANIGVDSVTDVAKMPSQTYKGYHIDGSINFPATDMISEE 599 Query: 510 EKQLEAATQL-EGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHH 568 E + +V +AEV++ WTG+P+ ++ + E E + +EQELH Sbjct: 600 NYDTEYTSNASWDSDSTETLCEVNTEHVAEVVSNWTGVPLKKLTQGEIEAIRNLEQELHK 659 Query: 569 RVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEA 628 V+G EAV ++ AIRR++ + +P RPIGSFLF GP GVGK+E+ K L MF +++ Sbjct: 660 SVVGHEEAVKNIAKAIRRAKTNIKNPERPIGSFLFCGPPGVGKSEIAKTLTKLMF-TEDN 718 Query: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688 ++++DMSE+ E HS+SR++G+PPGY G++ GG LTE +R+ PYSV++ DE+EKAH +V N Sbjct: 719 LIKLDMSEYNEPHSISRILGSPPGYKGHDSGGQLTEKLRKNPYSVVMFDEIEKAHRNVLN 778 Query: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERF----------------GEL 732 ILLQ+L+DG+LTD + +TV F+NT++IMTSN+GS +I++ + Sbjct: 779 ILLQILEDGKLTDSKNQTVSFKNTIIIMTSNVGSHIIEKAVRGIHTFGFNIEDVLNDKQT 838 Query: 733 DYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYE 792 DY K+ V + F+PE I+RID+V++F PL EQ + IA++ ++ KR ++ G + Sbjct: 839 DYEKAKKQVCDELKSTFKPELIDRIDDVILFRPLNEQQMKQIAKLMIEATLKRAKDAGID 898 Query: 793 IHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDR 852 + + D + + + D GARP++R I +++ LA ++S + +PG R+ V+ + Sbjct: 899 VVVDDSFIDHIMKLPRDATGGARPIRRLITTHLDDQLADFVISKDYIPGIKYRITVDSNA 958 Query: 853 IVAVQ 857 + ++ Sbjct: 959 QIKIK 963 >UniRef50_A8I1M5 ClpD chaperone, Hsp100 family n=1 Tax=Chlamydomonas reinhardtii RepID=A8I1M5_CHLRE Length = 997 Score = 667 bits (1720), Expect = 0.0, Method: Composition-based stats. Identities = 338/895 (37%), Positives = 489/895 (54%), Gaps = 94/895 (10%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +R T + + AQ+ A + + H++ L+ +E S + L S G+++ + + Sbjct: 75 FERFTERSIKTVMIAQAEAKAFGHTEVNTEHILLGLVAEESLSKNGYLNS-GVSSERAKA 133 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTL 122 + R V G + S+++ ++ ++ N+IS E +LA L Sbjct: 134 AVEALFGRKRPVSH-GESIPFSREVRKMFENATHECKRSNVNWISPEHILLAMLSMPDCN 192 Query: 123 A-DILKAAGATTANITQAIEQMRGGES--------VNDQGAEDQRQALKKYTIDLTERAE 173 +L + A + + G++ E + ++Y DL Sbjct: 193 GKRVLHSLSADVEGLKAEAGKRLKGDTDAEQAKKKQGAAAKEQGPKMTEEYCKDLCAEVR 252 Query: 174 QGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGE---VPE 230 G++DPV+GRD E+ R Q+L RRTKNNP+L+GEPGVGKTAI EGLA I++ +PE Sbjct: 253 AGRIDPVVGRDREVGRVCQILARRTKNNPILLGEPGVGKTAIAEGLAAAIVHRAASPLPE 312 Query: 231 GLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKAD 290 L +R+L LD+G L+AGAK RGE E R+ ++ ++ + GN+IL IDE+HT+VGAG Sbjct: 313 FLHSKRILQLDVGLLIAGAKERGELESRVTKLIAEIREA-GNIILMIDEIHTLVGAGSVG 371 Query: 291 GA----MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDT 346 +D N++KPALARGE +GATTLDE+R+YIE+DAALERRFQ V V EP+ E T Sbjct: 372 RGGGGGLDIANLVKPALARGEFQVIGATTLDEHRKYIERDAALERRFQPVTVDEPTPEAT 431 Query: 347 IAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQID 406 + IL+GLKERYE HH T+ A+ AA LSH+YIADR LPDKAIDLIDEA S R+ Sbjct: 432 LTILQGLKERYERHHRCAYTEEALAAAVALSHKYIADRFLPDKAIDLIDEAGSRARIAAY 491 Query: 407 SKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEK 466 + RQ ++ Sbjct: 492 TA--------------------------------------------RQNQARAGAGGRQQ 507 Query: 467 ASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRL 526 +L + E+A + + +P+++ + E A + Sbjct: 508 QLTMAPGGAGGDLSRGNQKQEEACINANPGVLPAC----LPQVDYRAELAGPSCEGS--- 560 Query: 527 LRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRR 586 + V +I ++A WT IPV RM + E+E+LL M L V+GQ +AV+A+S A+ R Sbjct: 561 VLPVVGVEDIEAIVAAWTSIPVERMSDGEKERLLNMRHTLASHVVGQADAVEAISTALCR 620 Query: 587 SRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRL 646 +R GL P RP+ + LF+GPTGVGKTEL K L+ + S EA++R+DMSE+ME+HSVS+L Sbjct: 621 ARCGLNLPRRPVAALLFVGPTGVGKTELAKVLSEQYYGSREALLRLDMSEYMERHSVSKL 680 Query: 647 VGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRT 706 VGAPPGYVG+ +GG LTEA+RRRP+SV+L DE+EKAHPDVF+ILLQ+L+DGRLTD QGR Sbjct: 681 VGAPPGYVGFGDGGKLTEAIRRRPFSVVLFDEIEKAHPDVFSILLQILEDGRLTDSQGRV 740 Query: 707 VDFRNTVVIMTSNLGSDLI------------------------QERFGELDYAHMKELVL 742 V F+N ++I+TSN+GS LI E+ +K+ VL Sbjct: 741 VSFKNAMIILTSNVGSRLIAAAGNAARNGAGVFSRPGMGAGPTDEKLQAAQAFKLKQEVL 800 Query: 743 GVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKL 802 G V F PE +NR DE VVF L + +A IAQ+ L + R ERG + I+ ++ Sbjct: 801 GEVRGFFAPELLNRFDETVVFQRLRREDVAHIAQLLLAQTIARAGERGLGLRIAPALMEH 860 Query: 803 LSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857 + G+ YGARPL++AI + +++PL+ +L + G + L +N D V V+ Sbjct: 861 IVAEGHSDEYGARPLRQAIVRLVDDPLSDAVLHRKFGAGVALVLGLNSDGAVTVR 915 >UniRef50_Q2T6Y8 ATP-dependent Clp protease, ATP-binding subunit ClpB n=5 Tax=Proteobacteria RepID=Q2T6Y8_BURTA Length = 958 Score = 666 bits (1719), Expect = 0.0, Method: Composition-based stats. Identities = 328/900 (36%), Positives = 492/900 (54%), Gaps = 48/900 (5%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 ++RL + AL +A + + + HL++ L ++ V+ LL ++G +A +LR Sbjct: 10 IERLNPYCRTALENAVGACVARRHDDVAVEHLLARLCDEPSADVALLLRASGADAARLRR 69 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQ-KRGDNFISS------------- 108 + AL+ P G GG + L+ +L +A + G+ I S Sbjct: 70 QADAALDARP--AGGGGRPAFAPSLLALLQDAWLIASLELGETQIRSAAVLAAAVARAAR 127 Query: 109 -----ELFVLAALESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKK 163 +L +L +A A + + G++ + GA D A+ + Sbjct: 128 QPSRGGDDMLQSLRRDALVARFAHACAQSIESRGPGARDAAPGDANDTPGAHDASSAIAR 187 Query: 164 YTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRI 223 Y D T +A G++DPV GRD +IR+ + +L RR KNNPV +GEPGVGKTA+VEGLA RI Sbjct: 188 YCEDFTAKARAGRIDPVFGRDAQIRQIVDILARRRKNNPVCVGEPGVGKTAVVEGLALRI 247 Query: 224 INGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTM 283 G+VP L+ +L LD+G L AGA +GEFE+RLK V+ ++ + V+LF+DE HT+ Sbjct: 248 AEGDVPAALRHATLLGLDLGLLQAGASVKGEFEQRLKRVIAEIHASQAPVVLFVDEAHTL 307 Query: 284 VGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSV 343 +GAG GA DA N+LKPALARGEL + ATT EY++Y EKDAAL RRFQ V + P V Sbjct: 308 IGAGGPAGASDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALARRFQPVKLDSPDV 367 Query: 344 EDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRM 403 ++ ILRGLKERY+ H V I D A+VAAA LS RYI RQLPDKAIDL+D A + +++ Sbjct: 368 ATSVMILRGLKERYQDAHGVTIRDDALVAAAELSERYITGRQLPDKAIDLLDTACARVKV 427 Query: 404 QIDSKPEELDRLDRRIIQLKLEQQALMKESDE---ASKKRLDMLNEELSDKERQYSELEE 460 + +KP L+ +R I L+ E++AL ++ E R+ ++ EL+ + L E Sbjct: 428 RQQTKPAALEDAERAIQALERERRALRRDLAERCAPDTPRVADIDRELAALSARADALSE 487 Query: 461 EWKAEKASLSGTQTIKA-----------------ELEQAKIAIEQARRVGDLARMSELQY 503 W A++ + + + A V A S Sbjct: 488 AWAAQRDAAQALVEARRACRAIADAAEAAETASASGVAGVAGVAAAADVAPGAEASADAR 547 Query: 504 GKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRME 563 + + + L+R V IA+V+A WTGI ++ +LR+ Sbjct: 548 ERAARALADATHRFEHARRDAPLVRIDVDPEAIADVVADWTGIAAGKLRRDRANVMLRLA 607 Query: 564 QELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMF 623 L R+ GQ+ A++ +S A++ AG+ DP RP+G FL GP+G GKTE A+A+ +F Sbjct: 608 DTLKGRIRGQDHAIEQISEAVKAGAAGVHDPRRPLGVFLLAGPSGTGKTETALAVADALF 667 Query: 624 DSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAH 683 + ++V ++MSEF E+H VSRL+G+PPGYVGY EGG LTEAVR+RPYSV+LLDEVEKAH Sbjct: 668 GDERSIVVVNMSEFQERHDVSRLIGSPPGYVGYGEGGMLTEAVRQRPYSVVLLDEVEKAH 727 Query: 684 PDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE---RFGELDYAHMKEL 740 PDV N+ QV D G L DG+G+ VDF NTV+ +TSNLG+D+I + R G D M+ Sbjct: 728 PDVLNLFYQVFDKGSLCDGEGKEVDFANTVIFLTSNLGADVIADLAARGGRPDPDAMRAA 787 Query: 741 VLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYE-IHISDEA 799 + +S +F+P + R+ E+ + L +A IA+ +L+R+ R+ + + + Sbjct: 788 IRPALSRHFKPALLARMTEI-PYATLAPDTLADIARRKLERIAARVAAQHATRVVYDEAV 846 Query: 800 LKLLSENGYDPVYGARPLKRAIQQQIENPLAQQIL--SGELVPGKVIRLEVNEDRIVAVQ 857 + ++ + GAR + +Q+ + LAQ +L +G+ P IR+ ++ + V Sbjct: 847 VAHVAARCTEVESGARSVDFILQRHVLPALAQHVLVCAGDATPMAAIRIAIDANGRFVVS 906 >UniRef50_Q46HG6 ATPase n=17 Tax=Cyanobacteria RepID=Q46HG6_PROMT Length = 931 Score = 666 bits (1719), Expect = 0.0, Method: Composition-based stats. Identities = 377/912 (41%), Positives = 560/912 (61%), Gaps = 71/912 (7%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 D +++ L A+ A ++ ++ HL+ L + S IN +L Sbjct: 18 EPDSFSDEAWSLLLIAEQSARRWRHKNLDVEHLIEVLFRNKK--YQKYTNSLPINHKELN 75 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGT 121 + + LP D+ +DL +L + D + G N I ++A Sbjct: 76 EILENFIAELP--INNQPDLFIGEDLEILLEVADDFRSRWGSNQIEISHILIAIGRDNRL 133 Query: 122 LADILKAAGATTANITQAIEQMRGGESVNDQGAE-------------------------- 155 D+L AG + + + ++ +S Sbjct: 134 GEDLLYQAGLPSEILEAELRRLPAPKSFKQSKRNQDKPITNRPQKDSQSFMPTETTAKDP 193 Query: 156 -----------------------DQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQ 192 + AL Y DLT AE G LDPVIGR+ EI+ + Sbjct: 194 KPEPLPPLSKEEITSKQEPLNLNEAPSALDLYCKDLTTEAENGTLDPVIGRESEIKAITK 253 Query: 193 VLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYR 252 VL RR KNNPVLIG PGVGKTAI E LAQ+I++ E+PE L+G R+++LD+GAL+AGAK+R Sbjct: 254 VLSRRGKNNPVLIGAPGVGKTAIAELLAQKIVDNELPESLQGLRLISLDIGALIAGAKFR 313 Query: 253 GEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVG 312 G+FEER + +L+++ E VILFIDELHT+V +++ DAG++LKP LA G+L C+G Sbjct: 314 GQFEERFRSLLSEINNSEKGVILFIDELHTIVSKDRSNT--DAGSLLKPLLASGDLRCIG 371 Query: 313 ATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVA 372 ATT D YR+ IEKD AL RRFQ+V + EPS++ ++ IL+GLKE YE+HH V ITD A++ Sbjct: 372 ATTPDNYRRTIEKDLALNRRFQQVSIKEPSLDLSLEILKGLKENYEVHHGVIITDEALIT 431 Query: 373 AATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKE 432 A L++RYI+DR LPDKAIDLIDEA++ +R++ KP+ ++ + ++ L+ +++ Sbjct: 432 ANRLAYRYISDRCLPDKAIDLIDEASAQVRIESALKPKIIEEKESQVNHLE---SSIINA 488 Query: 433 SDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRV 492 + + + ++ L E+ + +E++++W+ + + Q +K L++ K I + Sbjct: 489 DKDTTLETINNLQEKKELLLFELAEIKQKWQDQIDKSAELQELKISLKELKNLIREVEIS 548 Query: 493 GDLARMSELQYGKIPELEKQLEAATQLEGKTMR----LLRNKVTDAEIAEVLARWTGIPV 548 GD+ + L+Y ++ +L++++E + LL++KV +IA+V++RWTGIPV Sbjct: 549 GDMEEVERLKYDQLYQLQERIEEIEVSIREDNEYGNSLLKDKVNPEDIADVVSRWTGIPV 608 Query: 549 SRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTG 608 +++ ER+KLL++EQ+L +VIGQ AV AVS AIRR+RAG+ D RPIGSFLFLGPTG Sbjct: 609 RKVVSGERQKLLKLEQDLGKKVIGQLNAVQAVSAAIRRARAGMQDIKRPIGSFLFLGPTG 668 Query: 609 VGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRR 668 VGKTEL K+LA+ +FD ++A++R+DMSE+ME+++VSRL+GAPPGYVGYEEGG LTEA+R+ Sbjct: 669 VGKTELAKSLASSLFDEEDALLRLDMSEYMERNAVSRLLGAPPGYVGYEEGGQLTEAIRK 728 Query: 669 RPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQER 728 RPY+V+LLDE+EKAH +VFNILLQVLDDGRLTD QGRTVDFRNTV++MTSNL S I Sbjct: 729 RPYAVLLLDEIEKAHQEVFNILLQVLDDGRLTDSQGRTVDFRNTVIVMTSNLASKAILNN 788 Query: 729 FGELDY---------AHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQL 779 +L + + + ++ +FRPEF+NRIDEV+ F+PL + I ++QL Sbjct: 789 SLQLQSENSNKNILLQELDQKINEALTKHFRPEFLNRIDEVIKFNPLKPDSLEQIVRLQL 848 Query: 780 KRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELV 839 L K L+ +G ++++ + +K+L+E GY+P YGARPL+R I++++ENPLA QIL Sbjct: 849 DELKKLLKHQGLDLYVDENTIKILAEEGYEPEYGARPLRRVIRRRLENPLATQILEEAFQ 908 Query: 840 PGKVIRLEVNED 851 K IR+E +D Sbjct: 909 GAKSIRVETKDD 920 >UniRef50_C9RMJ0 ATPase AAA-2 domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RMJ0_FIBSS Length = 838 Score = 666 bits (1718), Expect = 0.0, Method: Composition-based stats. Identities = 325/870 (37%), Positives = 482/870 (55%), Gaps = 98/870 (11%) Query: 22 LGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQALNRLPQVEGTGGD- 80 + + HL+ L+ ++ G S L + +N +L I +AL+ + GGD Sbjct: 24 RNLGSDCVTVEHLLFGLVREDSGVASETLKALKVNLTELSETIQRALSTNGGLMTVGGDS 83 Query: 81 ----VQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGT-LADILKAAGATTAN 135 + + VL K+A++ G FI E +LA L+ + A L T N Sbjct: 84 HGGLLTFTGQCKAVLYNAAKIAKEEGVQFIGPEHLMLAILQQTDSPAAATLSTYNVTFEN 143 Query: 136 ITQ---------------------AIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQ 174 + + + + + L+ + DLT A Sbjct: 144 YQEMLMQIKRQADGQPMDEGQPEDEPRERYTQTRQANPQSRSKTPILEHFGRDLTAMARA 203 Query: 175 GKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKG 234 GKLDP+IGR+ EI R IQ+L RR KNNP LIGEPGVGKTAI+EGLA +I+ ++P+ L Sbjct: 204 GKLDPIIGREAEIERLIQILCRRKKNNPALIGEPGVGKTAIIEGLALKIVQRKIPDLLAN 263 Query: 235 RRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMD 294 +RV+ LD+ A+VAG KYRG+FEER+KG++ +L + +VILFIDELHT+VGAG ++G++D Sbjct: 264 KRVVTLDVAAMVAGTKYRGQFEERVKGLIMELQRVGNSVILFIDELHTIVGAGGSEGSLD 323 Query: 295 AGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLK 354 A N+ KPALARGEL C+GATT DEYR+YIEKD ALERRFQ + V P+VED+I IL GL+ Sbjct: 324 ASNIFKPALARGELQCIGATTFDEYRKYIEKDPALERRFQTIIVNPPTVEDSIQILEGLR 383 Query: 355 ERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDR 414 +YE HH+V T A+ AA L RYI++R LPDKAID++DEA + +R+ P++L Sbjct: 384 PKYEQHHNVHYTPDAVRAAVELGERYISERFLPDKAIDVLDEAGARVRLNSIKIPQDLQN 443 Query: 415 LDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQT 474 ++ + +++ + D S +L EEL + + + + ++E + Sbjct: 444 MEDELGVCLQKKEEAVANQDYTSAAQLRAREEELQNSIAERKKQLQSEESETPVVD---- 499 Query: 475 IKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDA 534 + + + R+ + K+ L +++ + + + Sbjct: 500 -----DNVIRDVISKMTGIPVRRLGGEEAQKLIHLGDEIKQRVIGQDQAV---------- 544 Query: 535 EIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADP 594 + V ++ RRSRAG+ + Sbjct: 545 ---------------------------------------DAIVKSI----RRSRAGIRNN 561 Query: 595 NRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYV 654 RP+GSFLFLGPTGVGKTEL K L +F S++++VRIDMSE+MEKHSVSRL+GAPPGYV Sbjct: 562 KRPMGSFLFLGPTGVGKTELAKVLCKELFGSEDSLVRIDMSEYMEKHSVSRLIGAPPGYV 621 Query: 655 GYEE-GGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTV 713 G+E+ GG L+E VR+ PYSV+LLDE+EKAHPD++N+LLQ+LDDG LTD GR ++F+NT+ Sbjct: 622 GFEDGGGQLSEKVRKHPYSVVLLDEIEKAHPDIYNLLLQILDDGILTDSYGRKINFKNTI 681 Query: 714 VIMTSNLGSDLIQERFG--------ELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHP 765 +IMTSN G+ ++ G DY M+ + V F PEF+NR+DE +VF Sbjct: 682 IIMTSNAGAREVRHSSGMGFTKMGETDDYERMETAIREEVKRVFSPEFLNRVDEQIVFRA 741 Query: 766 LGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQI 825 L ++ + S+ IQ+ L K L +RG + +S EA + + + YD GARP++R+IQ + Sbjct: 742 LSKKDLVSVVDIQMGFLQKNLSDRGILLEMSQEAKEFVVNHNYDASLGARPIRRSIQNLV 801 Query: 826 ENPLAQQILSGELVPGKVIRLEVNEDRIVA 855 E+ +A+ +L G + I + V ++ Sbjct: 802 EDEIAEGLLLGTMTDFSTIYVGVENGKLSF 831 >UniRef50_Q9PKA8 Probable ATP-dependent Clp protease ATP-binding subunit n=25 Tax=Bacteria RepID=CLPC_CHLMU Length = 870 Score = 664 bits (1714), Expect = 0.0, Method: Composition-based stats. Identities = 328/896 (36%), Positives = 514/896 (57%), Gaps = 102/896 (11%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 ++ TN+ + + A+ A ++ ++ H++ LL G +L + G++ Sbjct: 16 FMFEKFTNRAKQVIKLAKKEAQRLNHNYLGTEHILLGLLKLGQGVAVNVLRTLGVDFDTA 75 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES-R 119 + ++ + + P+++ GD + + + ++ A N++ +E +L L Sbjct: 76 KNEVERLIGYGPEIQ-VYGDPALTGRVKKSFESANEEASILEHNYVGTEHLLLGILNQAD 134 Query: 120 GTLADILKAAGATTANITQAIEQMRGGESVNDQGA------------------------- 154 G +L+ I + I + ++ + Sbjct: 135 GVALQVLENLHIDPKEIRKEILKELETFNLQLPPSSSITPRNTNSSSSSSSKSSSLGGHS 194 Query: 155 -----EDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPG 209 ++ ALK Y DLTE ++ +LDPVIGR E+ R I +L RR KNNPVLIGE G Sbjct: 195 LGGDKPEKLSALKAYGYDLTEMFKEARLDPVIGRSAEVERLILILCRRRKNNPVLIGEAG 254 Query: 210 VGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQ 269 VGKTAIVEGLAQ+I++GEVPE L+ +R++ LD+ ++AG KYRG+FEER+K V++++ K Sbjct: 255 VGKTAIVEGLAQKIVSGEVPEALRKKRLITLDLALMIAGTKYRGQFEERIKAVMDEVRKH 314 Query: 270 EGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAAL 329 GN++LFIDELHT+VGAG A+GA+DA ++LKPALARGE+ C+GATTLDEYR++IEKDAAL Sbjct: 315 -GNILLFIDELHTIVGAGAAEGAIDASHILKPALARGEIQCIGATTLDEYRKHIEKDAAL 373 Query: 330 ERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDK 389 ERRFQK+ V PSV++T+ ILRGLK++YE HH+V ITD A+VAAA LS +Y+ R LPDK Sbjct: 374 ERRFQKIVVQPPSVDETVEILRGLKKKYEEHHNVFITDEALVAAAKLSDQYVHGRFLPDK 433 Query: 390 AIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELS 449 AIDL+DEA + +R+ +P EL RL+ ++ +QA + ++ L +E Sbjct: 434 AIDLLDEAGARVRVNTMGQPSELLRLEAE---IESTKQAKEQAIGTQEYEKAASLRDEEK 490 Query: 450 DKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPEL 509 + S ++++W++ K E+A + + AR++E + K+ L Sbjct: 491 KLREKLSNMKQQWESNKEEHQVPVD-----EEAVAQVVSVQTGIPAARLTEAESEKLLML 545 Query: 510 EKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHR 569 E L+ + + + + + Sbjct: 546 ENTLQKKVIGQDQAVASICRAIRR------------------------------------ 569 Query: 570 VIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAM 629 SR G+ DPNRP+GSFLFLGPTGVGKT L + +A MF ++++ Sbjct: 570 -----------------SRTGIKDPNRPMGSFLFLGPTGVGKTLLAQQIAVEMFGGEDSL 612 Query: 630 VRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNI 689 +++DMSE+MEK + ++++G+PPGYVG+EEGG+LTE VRRRPY V+L DE+EKAHPD+ ++ Sbjct: 613 IQVDMSEYMEKFAATKMMGSPPGYVGHEEGGHLTEQVRRRPYCVVLFDEIEKAHPDIMDL 672 Query: 690 LLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE-------RFGELDYAHMKELVL 742 +LQ+L+ GRLTD GR +DFRNT++IMTSNLG+DLI++ +DY +KE + Sbjct: 673 MLQILEQGRLTDSFGRKIDFRNTIIIMTSNLGADLIRKTGEIGFGLRSHMDYGVIKEKID 732 Query: 743 GVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKL 802 V + +PEFINR+DE V+F PL ++ ++ I +++ +L RL+ ++I D + Sbjct: 733 AAVKKHLKPEFINRLDESVIFKPLEKEALSEIIHLEINKLGSRLQNHQMALNIPDSVVSF 792 Query: 803 LSENGYDPVYGARPLKRAIQQQIENPLAQQILSGEL-VPGKVIRLEVNEDRIVAVQ 857 L + G+ P GARPL+R ++Q +E+PLA+ +L + + + E+R++ + Sbjct: 793 LVDKGHSPEMGARPLRRVVEQYLEDPLAEMLLKESCRQEARKLCARLIEERVIFER 848 >UniRef50_B8L5D3 Type VI secretion ATPase, ClpV1 family n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L5D3_9GAMM Length = 917 Score = 663 bits (1710), Expect = 0.0, Method: Composition-based stats. Identities = 308/905 (34%), Positives = 481/905 (53%), Gaps = 58/905 (6%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 + +L + + A A +L + N ++ HL ALL Q + +GI L Sbjct: 9 ISKLDDTCRQAAERAANLCMARGNYEVDLEHLFLALLEQPQSDFVLIARRSGILPESLER 68 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDN-FISSELFVLAALESRGT 121 D+N +++ G SQ + ++ +A + I S +LA L Sbjct: 69 DLNDEISQF--KTGNSRTPVFSQHIPKLFEHAWLIASLDSETTRIRSGHLLLALLTEPDL 126 Query: 122 L----------------------ADILKAAGATTANITQAIEQMRGGESVND-------Q 152 A + + + + A G ++ + Sbjct: 127 AQLAYRGSKLFVRFKRDELKHDFAKLTEGSQEAVQTVRFADASAAGEAGEDEGAVPGEAK 186 Query: 153 GAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGK 212 G + AL ++T +LT+RA GK+DPVIGRD EIR+ I +L RR +NNP+L GE GVGK Sbjct: 187 GGLSKTPALDQFTTNLTQRARDGKIDPVIGRDGEIRQVIDILMRRRQNNPILTGEAGVGK 246 Query: 213 TAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGN 272 TA+VEGLA+RI + +VP+ L+G + LDMG L AGA +GEFE RLK V++++ K Sbjct: 247 TAVVEGLARRIADKDVPDVLQGVELHTLDMGLLQAGASVKGEFENRLKNVIDEVKKSPHP 306 Query: 273 VILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERR 332 +ILFIDE HTM+GAG G DA N+LKPALARGEL + ATT EY++Y EKDAAL RR Sbjct: 307 IILFIDEAHTMIGAGGTAGQNDAANLLKPALARGELRTIAATTWGEYKKYFEKDAALARR 366 Query: 333 FQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAID 392 FQ V V EPS A+LRG+ E H ++++ D A+ A LSHRYI+ RQLPDKA+ Sbjct: 367 FQVVKVEEPSEALAAAMLRGMVGLMEAHFNIRVLDEAVTEAVRLSHRYISGRQLPDKAVS 426 Query: 393 LIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKES---DEASKKRLDMLNEELS 449 ++D A + + + + P ++ + + +L+ E AL +E+ + +RL L+ + + Sbjct: 427 VLDTACAKVALGQSATPAIIEDTRKHLDRLQAEISALQRETAGGSDQHGERLAELHAQQA 486 Query: 450 DKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGD-------LARMSELQ 502 + + + EE E+ ++ ++EQ + A D +A+ + + Sbjct: 487 EAQAVLTSNEERLGRERDLAGRIAVLRQQMEQGEAASGDPEPSNDDNEGDVAVAKPAAKR 546 Query: 503 YGKIPELEKQLEAATQLEGK------TMRLLRNKVTDAEIAEVLARWTGIPVSRMMESER 556 EL Q +L+ + ++ +V +AE+++ WTG+P+ RM++ E Sbjct: 547 GKAKAELSPQHAELARLQAELRELQGETPMVPLQVDGTVVAEIVSAWTGVPLGRMVKDEI 606 Query: 557 EKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCK 616 + + L RVIGQ+ A+DA++ +R + A L DPN+P G F+F+GP+GVGKTE Sbjct: 607 RTVRTLGNLLVERVIGQDHALDAIAQRVRTATAKLEDPNKPRGVFMFVGPSGVGKTETAL 666 Query: 617 ALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILL 676 ALA+ ++ + +V I+MSE+ E HSVS L G+PPGYVGY EGG LTEAVRR PYSV+LL Sbjct: 667 ALADILYGGERKLVTINMSEYQEAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLL 726 Query: 677 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAH 736 DEVEKAHPDV + QV D G + D +GR +DFRNT++I+TSN+GS I + Sbjct: 727 DEVEKAHPDVLEMFFQVFDKGMMDDAEGREIDFRNTLIILTSNIGSSQIMQACLNKPAEE 786 Query: 737 MK------ELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEER 789 + + + V+ F+P F+ R+ +VV ++P+ + +A I ++L R+ R + Sbjct: 787 IPGAEALSDALRPVLMRTFKPAFLGRL-KVVPYYPINDDVLAQIITLKLGRIRDRVIANH 845 Query: 790 GYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKV--IRLE 847 D ++ + + GAR + + + +A+ +L+ ++ I++ Sbjct: 846 KATFSWDDSLVEAVLARCTEVDSGARNVDHILNGTLLPEIAESVLAAMAEGNRINAIKVT 905 Query: 848 VNEDR 852 + Sbjct: 906 AGKKG 910 >UniRef50_D2QZM9 Type VI secretion ATPase, ClpV1 family n=6 Tax=Bacteria RepID=D2QZM9_9PLAN Length = 915 Score = 663 bits (1710), Expect = 0.0, Method: Composition-based stats. Identities = 311/901 (34%), Positives = 483/901 (53%), Gaps = 54/901 (5%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +L + A+ A N ++E H + +L V ++ + +L Sbjct: 10 FGKLNSLAYRAIEAATVFCKMRGNPYVELAHWLHQILQLPDSDVHKIIKQFNLEPSRLAR 69 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKR-GDNFISSELFVLAALESRGT 121 D+ + L+R P+ G+ S L A D+ + + ++ ++++ Sbjct: 70 DLTETLDRFPR--GSSSISDLSSHLEDATQQGWVYATLMFKDSQVRTGYLIVGMIKTKTL 127 Query: 122 LADIL-------------------KAAGATTANITQAIEQMRGG--------ESVNDQGA 154 +L + + + +A + + G A Sbjct: 128 NNALLSISKEFGKINADTLIDKFAEVVAGSPEDSLRASDGTQVGGGAVPGEASGAMAPAA 187 Query: 155 EDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214 +++ALK+++IDLTERA +G++DP++GRDEEIR+ + +L RR +NNP+L GE GVGKTA Sbjct: 188 MGKQEALKQFSIDLTERARKGEIDPIVGRDEEIRQLVDILMRRRQNNPILTGEAGVGKTA 247 Query: 215 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 274 +VEG A RI +G+VP LK + +LD+G L AGA +GEFE RL+ V+ ++ E +I Sbjct: 248 VVEGFALRIASGDVPPSLKDVSLRSLDIGLLQAGASMKGEFENRLRQVIEEVQSSEQPII 307 Query: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334 LFIDE HT++GAG A G DA N+LKPALARG+L V ATT EY+++IEKD AL RRFQ Sbjct: 308 LFIDEAHTLIGAGGAAGTGDAANLLKPALARGKLRTVAATTWAEYKKHIEKDPALTRRFQ 367 Query: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394 V V EPS + I ++RG+ E HH VQI D A+ A+ LSHRYI RQLPDK++ L+ Sbjct: 368 VVQVGEPSEDKAILMMRGMASTLEQHHRVQILDEALEASVRLSHRYIPARQLPDKSVSLL 427 Query: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASK--KRLDMLNEELSDKE 452 D + + + + P E++ R+I L++EQ + +E KR ++ +L+ + Sbjct: 428 DTTCARVAISQHAVPAEVEDCRRKIEALEVEQGIIAREKAVGVDTTKREKEVDSKLAIER 487 Query: 453 RQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIE----------------QARRVGDLA 496 + LE+ W EK + I+ +L +E Sbjct: 488 ERLKGLEQRWTDEKTLVDEILDIRGKLRGQTGKVEGTHSKLEKAADKAAKEAPPVAAPTP 547 Query: 497 RMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESER 556 ++E + + +L+A L+ V + +A V+A WTGIPV RM+++E Sbjct: 548 PLTEAERAPLLAKLTELQAKLTALQGESPLILPTVDEQAVASVVADWTGIPVGRMVKNEV 607 Query: 557 EKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCK 616 E +L++ + L RVIGQ+ A+ ++ I+ SRA L +PN+PIG FL G +GVGKTE Sbjct: 608 EAVLKLAETLGQRVIGQDHAMKMIARRIQTSRAQLENPNKPIGVFLLAGTSGVGKTETAL 667 Query: 617 ALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILL 676 ALA ++ ++ ++ I+MSEF E H+VS L G+PPGYVGY EGG LTEAVRR+PYSV+LL Sbjct: 668 ALAEALYGGEQNVITINMSEFQEAHTVSTLKGSPPGYVGYGEGGILTEAVRRKPYSVVLL 727 Query: 677 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAH 736 DEVEKAH DV + QV D G + DG+GR +DF+NT++++TSN GSDLI + + Sbjct: 728 DEVEKAHGDVHELFFQVFDKGWMEDGEGRVIDFKNTLILLTSNAGSDLIMNMCKDPELLP 787 Query: 737 MKELVLGVVS----HNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLE-ERGY 791 E + + F + R+ + ++PL + IA+I ++QL+R+ KR+ Sbjct: 788 DPEAIAKSLRDPLLKVFPAALLGRL-VTIPYYPLSDSMIAAITRLQLRRIEKRIGVNHKV 846 Query: 792 EIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNED 851 SDE LKL+ + G R + + + ++++IL +V V ++E+ Sbjct: 847 PFTYSDEVLKLIVSRCTELESGGRMIDSILTNTMLPAISEEILKRMMVGSAVKKIEITAK 906 Query: 852 R 852 Sbjct: 907 G 907 >UniRef50_Q9F746 Chaperone protein clpB n=100 Tax=Proteobacteria RepID=CLPB_YEREN Length = 890 Score = 662 bits (1708), Expect = 0.0, Method: Composition-based stats. Identities = 311/886 (35%), Positives = 473/886 (53%), Gaps = 46/886 (5%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +L + A ++ N ++E +H ++ L +QE + ++ ++ Sbjct: 9 FGKLDATLFKGIESATTICKLRGNPYVELIHWLNQLWHQEDNDLKHIVRYFAVDVDAFER 68 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRG-DNFISSELFVLAALESRGT 121 + QAL RLP + D S + + A D I S +LA L + Sbjct: 69 GLAQALARLPVGATSISD--FSYHIELAIERAWVYASLECLDTRIRSGHLLLAMLTNMEL 126 Query: 122 LADIL-----------KAAGATTANITQAIEQMRGGESVNDQG-------------AEDQ 157 +L + + ITQA + + Sbjct: 127 RRALLAIAPEMEKIPLEHLSSDFNFITQASPETNEAATDGSPMYDGTLPGEASNAINGKS 186 Query: 158 RQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVE 217 L +YT DLT A +GK+DPV+GR+ EI + +L RR +NNP+L GE GVGKTA+VE Sbjct: 187 TATLAQYTTDLTALAREGKIDPVLGRNHEISTMVDILLRRRQNNPLLTGEAGVGKTAVVE 246 Query: 218 GLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFI 277 GLA I+ GE+P L +L LD+ AL AGA +GEFE RLK VL++ VILFI Sbjct: 247 GLALAIVAGEMPPALSQVSLLTLDVVALSAGASMKGEFEARLKNVLDEAMASPTPVILFI 306 Query: 278 DELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVF 337 DE+HT+VGAG G DA N+LKPALARG+L +GATT E++++IEKD AL RRFQ + Sbjct: 307 DEVHTLVGAGGNAGTGDAANLLKPALARGQLRTIGATTWSEFKRHIEKDPALTRRFQVLQ 366 Query: 338 VAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEA 397 V EP + I++LRGL E HH V I D A+ AA LSHRYI RQLPDKAI L+D A Sbjct: 367 VDEPDEDTAISMLRGLTPALEKHHGVWIMDEALQAAVRLSHRYIPARQLPDKAISLLDTA 426 Query: 398 ASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESD--EASKKRLDMLNEELSDKERQY 455 + + + S+P EL +L + + E +L K + +R +L ++ Sbjct: 427 CARVAVAQFSQPAELQQLTFQSETAQTELSSLEKAQHFGKGQDERTALLEATIAQHSAAA 486 Query: 456 SELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEA 515 ++LE+ W+AE+ ++ + L + E + + + QLE Sbjct: 487 NKLEQRWQAERELVTAITATRTVLYELVSQP----------TPDEEKRQQYQQQLAQLEE 536 Query: 516 ATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNE 575 L L++ +V IA ++A WTGI V +M++ + ++ + Q L RVIGQ Sbjct: 537 QLLLIRSAQPLVQAEVNATVIANIVADWTGIQVGQMLKDDIRAVMELPQRLEERVIGQPH 596 Query: 576 AVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMS 635 A+ +S I +RAG+ADP +P+G F+ +GP+GVGKTE A+A M+ ++ ++ I+MS Sbjct: 597 ALVQLSENIMTARAGMADPRKPLGVFMLVGPSGVGKTETALAIAESMYGGEQNLITINMS 656 Query: 636 EFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLD 695 E+ E H+VS L G+PPGYVGY EGG LTEAVRR+PYSV+LLDE+EKAH DV + QV D Sbjct: 657 EYQESHTVSSLKGSPPGYVGYGEGGVLTEAVRRKPYSVVLLDEIEKAHSDVHELFFQVFD 716 Query: 696 DGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVS----HNFRP 751 G++ DG+GR +DF+NT++++TSN+GS+L+ F + D A ++ +L + F Sbjct: 717 KGQMEDGEGRFIDFKNTILLLTSNVGSELLSNLFADPDTAPDQDGILSALQPELLKVFPA 776 Query: 752 EFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLE-ERGYEIHISDEALKLLSENGYDP 810 F+ R+ V+ + PL + + I ++ L R+ +RL+ + + SD + + Sbjct: 777 AFLGRVT-VIPYLPLQQSALQHIVRLHLDRIGQRLQSQHQLTLQYSDVVVDDVVSRCSVA 835 Query: 811 VYGARPLKRAIQQQIENPLAQQILS-GELVPGKVIRLEVNEDRIVA 855 GAR L R I+Q I + + IL + +P +++ ++ E++ Sbjct: 836 ETGARMLIRYIEQNITPEIGKFILRDHDAIPNQIVFVDKVENKFTV 881 >UniRef50_A6VUK5 ATPase AAA-2 domain protein n=64 Tax=Gammaproteobacteria RepID=A6VUK5_MARMS Length = 873 Score = 660 bits (1702), Expect = 0.0, Method: Composition-based stats. Identities = 292/874 (33%), Positives = 464/874 (53%), Gaps = 36/874 (4%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 + +L ++ +LAL A +L + + + H +S LL V + + ++ Sbjct: 10 ISKLNSQSKLALEQAAALCIERQHHEVSIEHFLSVLLENPMSDVCVIFDHVKLGKDDIQA 69 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQ-KRGDNFISSELFVLAALESRGT 121 I++ P+ S LV ++ L+ + + S +LA+L Sbjct: 70 AISK---SYPRSTTLDTYPPFSPLLVELMQEAWLLSSTELNQTELRSGAILLASLIHPDR 126 Query: 122 LAD--------------ILKAAGATTANITQAIEQMRGGESVNDQGAED-QRQALKKYTI 166 I K +++ + + + + AL K+ Sbjct: 127 YYSFEMIGLFEKINKEAIRKNFDLVLERSSESDHVVSDSQDKSTSSSVAAGNSALGKFCT 186 Query: 167 DLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIING 226 ++T +A+ +LDPV+ R++E+ + +L RR KNNP+++GE GVGK+A+VEGLA RI+ G Sbjct: 187 NVTLQAKNDELDPVLCREDELNLMVDILCRRRKNNPIVVGEAGVGKSAVVEGLALRIVAG 246 Query: 227 EVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGA 286 VP+ L + +LD+G L AGA +GEFE+RLKG+++++ +ILFIDE HT++G+ Sbjct: 247 NVPDKLANVEIHSLDLGLLQAGASIKGEFEKRLKGIIDEIKSSPVPIILFIDEAHTLIGS 306 Query: 287 GKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDT 346 G +G DA N+LKPALARGEL + ATT EY++Y EKD AL RRFQ V V EPSV + Sbjct: 307 GNQEGGSDAANLLKPALARGELSTIAATTWKEYKKYFEKDPALTRRFQLVKVEEPSVSQS 366 Query: 347 IAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQID 406 + I+RGL YE H V I D A+ A++ LS RY++ RQLPDKAID++D A + I + I Sbjct: 367 VDIMRGLHHVYEKAHGVLIHDDALKASSELSARYLSGRQLPDKAIDVLDTACARIAINIS 426 Query: 407 SKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELS---DKERQYSELEEEWK 463 + P+ L +L+ + + E L +++ D L + E + L W Sbjct: 427 TPPKVLGQLENQCCTRQREIDMLKRQALIGQPVDNDYLESLIELEVQAELEKETLLNSWS 486 Query: 464 AEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKT 523 +K + I+ + + +A ++A +L + E ELE+ Sbjct: 487 KQKEIIEKIIDIRQSILRNPVADDEALSDDELDELREQLAASYQELEQ--------IPHH 538 Query: 524 MRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNA 583 RL+ +V +IAEV++ WTG+P+ +M E K+ + + L+ ++ GQ+ A++ V Sbjct: 539 ERLMYPEVNAQQIAEVISDWTGVPIDQMNSDELHKITHLPEILNAKIKGQDVAIECVHRH 598 Query: 584 IRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSV 643 + SRA L P RP G+FL +GP+GVGKTE LA ++ + + I+MSE+ EKH+V Sbjct: 599 LLTSRADLRRPGRPKGAFLLVGPSGVGKTETVIQLAEELYGGKQFLTTINMSEYQEKHTV 658 Query: 644 SRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQ 703 SRL+G+PPGYVG+ EGG LTEA+R++PYSV+LLDEVEKAHP+V N+ Q D G L DG+ Sbjct: 659 SRLIGSPPGYVGFGEGGVLTEAIRKKPYSVVLLDEVEKAHPEVLNLFYQAFDKGELADGE 718 Query: 704 GRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVF 763 GR +D +N + +TSNLG I + ++ + + F+P + R+ E+V + Sbjct: 719 GRLIDCQNILFFLTSNLGYQTIVDNV--ETPKEIEAKLYPELVPFFKPALLARM-EIVPY 775 Query: 764 HPLGEQHIASIAQIQLKRLYKRLEER-GYEIHISDEALKLLSENGYDPVYGARPLKRAIQ 822 PL + + I +L L K L +R E+ I ++ + GAR L+ I+ Sbjct: 776 LPLNKDVLEKIVLGKLSSLEKLLRKRYSAEVEIDPALVQEILNRATRSENGARMLEAIIE 835 Query: 823 QQIENPLAQQILSG--ELVPGKVIRLEVNEDRIV 854 Q+ P++ +L+ E P I + + E V Sbjct: 836 GQVLPPISLALLNRLAEQQPVSRIFMTIEEGEFV 869 >UniRef50_B3L4X1 Heat shock protein 101, putative n=8 Tax=Plasmodium RepID=B3L4X1_PLAKH Length = 906 Score = 659 bits (1699), Expect = 0.0, Method: Composition-based stats. Identities = 311/872 (35%), Positives = 495/872 (56%), Gaps = 25/872 (2%) Query: 4 DRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTD 63 + N+ L +++A + + ++P+H++SAL + G S LL +NA L+ Sbjct: 35 ENYLNRTINILNAGKNIAKRYGHSQLKPVHILSALAKSDYG--SNLLKENSVNASNLKQY 92 Query: 64 INQALNRLPQVEG--TGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGT 121 ++ AL + + S + VL + LA K + E + + Sbjct: 93 LDTALEQTRAGPPLDNKSKIAYSDQVKEVLAEAEALANKYKSQKVDVEHLLSGLMNDE-L 151 Query: 122 LADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVI 181 + +IL T + ++ + G L+++ +L E+ GKL + Sbjct: 152 VNEILNEVYLTDEAVKGILKSKLEKTKKDKDGKSGGLY-LEQFGSNLNEKVRNGKLQGIY 210 Query: 182 GRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALD 241 GRDEEIR I+ L R KN+PVL+G+PG GKT IVEGL RI G+VP+ L+G V++L+ Sbjct: 211 GRDEEIRAVIESLLRYNKNSPVLVGQPGTGKTTIVEGLVYRIEKGDVPKELRGYTVISLN 270 Query: 242 MGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKP 301 +G YRGEFE R+K ++ +L ++ +ILF+DE+H ++GAGKA+G DA N+LKP Sbjct: 271 FRKFTSGTSYRGEFETRMKNIIKELKNKKNKIILFVDEIHLLLGAGKAEGGTDAANLLKP 330 Query: 302 ALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHH 361 L++GE+ +GATT+ EYR++IE +A ERRF+K+ V PSVE+TI ILR LK +YE + Sbjct: 331 VLSKGEIKLIGATTIAEYRKFIESCSAFERRFEKILVEPPSVENTIKILRSLKSKYESFY 390 Query: 362 HVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQ 421 + ITD A+VAAA +S R+I DR LPDKAIDL+++A S +++Q+ KP +D +R I + Sbjct: 391 GIHITDKALVAAAKVSDRFIKDRYLPDKAIDLLNKACSFLQVQLSGKPRIIDVTEREIER 450 Query: 422 LKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQ 481 L E L + D+ SK++ + L +E +K+ EE+ L + + L + Sbjct: 451 LAYEISTLEMDVDKVSKRKYNNLIKEFENKKDLLRTYYEEYVISGERLKRKKEAEKRLNE 510 Query: 482 AKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQ-----LEGKTMRLLRNKVTDAEI 536 K + Q + ELQ EK +E + + + V + Sbjct: 511 LK-ELAQNYISANKEPPIELQNSLKDAQEKYMEVYKETLAYVEAKTHNAMNVDAVYQEHV 569 Query: 537 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNR 596 + + R +G+P+ + + L++ L +IG + + ++S+A+ ++ G+ DP + Sbjct: 570 SYIYLRDSGMPLGSLSFESSKGALKLYNSLSKSIIGNEDIIKSLSDAVVKAATGMKDPEK 629 Query: 597 PIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGY 656 PIG+FLFLGPTGVGKTEL K LA +F S + ++R++MSEF E HSVS++ G+PPGYVG+ Sbjct: 630 PIGTFLFLGPTGVGKTELAKTLAIELFSSKDNLIRVNMSEFTEAHSVSKITGSPPGYVGF 689 Query: 657 EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 716 + G LTEAVR RP+SV+L DE+EKAHPDVF +LLQ+L DG + D R +DF NT++IM Sbjct: 690 SDSGQLTEAVRERPHSVVLFDELEKAHPDVFKVLLQILGDGYINDNHRRNIDFSNTIIIM 749 Query: 717 TSNLGSDLIQE-------RFGELDYAHMKELVLGVV----SHNFRPEFINRIDEVVVFHP 765 TSNLG++L ++ +Y + + + + F+PEF+NRID++ +F P Sbjct: 750 TSNLGAELFKKKLFFDANNSDTPEYKRVFDDLRIQLIKKCKKVFKPEFVNRIDKIGIFEP 809 Query: 766 LGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQI 825 L ++++ I +++ K+L KRLEE+ + +S++A+ + + YDP GARP I+ I Sbjct: 810 LSKKNLREIVKLRFKKLEKRLEEKNIHVSVSEKAVDYIIDQSYDPELGARPTLIFIESVI 869 Query: 826 ENPLAQQILSGELVPGKVIRLEVNE--DRIVA 855 A L ELV + ++ N+ + +V Sbjct: 870 MTKFAIMYLKKELVDDMDVHVDFNKAANNLVI 901 >UniRef50_A8Q6N1 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8Q6N1_MALGO Length = 853 Score = 658 bits (1696), Expect = 0.0, Method: Composition-based stats. Identities = 372/865 (43%), Positives = 516/865 (59%), Gaps = 72/865 (8%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQE--------------GGSVSPLLT 51 T++ Q +LA A LA + + + P H+ ALLN + + Sbjct: 6 FTDRAQNSLAAAFQLAKDYAHAQLAPSHIALALLNDDTSNSTGVQSTNKDSQSLFKSICE 65 Query: 52 SAGINAGQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELF 111 G++ L + AL ++PQ DV + +++ + ++ D FI+ + Sbjct: 66 KTGVSVPDLENKLRAALRKIPQQSPAPDDVSLTGAASKIMKNAQQYKTQQRDAFIAQDHV 125 Query: 112 VLAALESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTER 171 +LA LE + +A A + AI Q RGG ++ + AE A+ KY DLT Sbjct: 126 LLALLEDSSINNMLKEAGLANPDLMKNAITQARGGRHIDSKTAEAGYDAMGKYCTDLTAL 185 Query: 172 AEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEG 231 A +GKLDPVIGRD EIRR ++VL RRTKNN VLIG PGVGKTA+VEGLAQR+I+ +VP Sbjct: 186 AAEGKLDPVIGRDNEIRRVVRVLSRRTKNNAVLIGSPGVGKTAVVEGLAQRVIDRDVPPN 245 Query: 232 LKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAK---QEGNVILFIDELHTMVGAGK 288 L G+ + +LDMG L+AGAKY+GE+EER+K VL+D+ K ILFIDE+H M+ Sbjct: 246 LLGK-IYSLDMGGLMAGAKYKGEYEERVKAVLSDIEKMTNDGTPCILFIDEMHLMMAGKG 304 Query: 289 ADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIA 348 D MDA N+LKP LARG+L C+GATTL+EYRQ IEKDAALERRFQ+V V EP+VEDTIA Sbjct: 305 GDTGMDAANLLKPMLARGKLRCIGATTLNEYRQSIEKDAALERRFQQVIVEEPTVEDTIA 364 Query: 349 ILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSK 408 ILRGL+E+YE+HH V+I D A+V+AA L+ RY+ R+LPD AIDL+DE+ + + + ++ Sbjct: 365 ILRGLREKYEVHHGVRILDAAVVSAAQLAKRYLTARKLPDSAIDLVDESCADVTVSRETV 424 Query: 409 PEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKAS 468 PE +D L+RR ++L++ AL +E D SK+RL+ +EL+ + + + ++ E++A++A Sbjct: 425 PEAIDTLERRKVRLQIAMTALEREKDPQSKERLEETRQELAHLDDELAPMKAEFEAQRAK 484 Query: 469 LSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLR 528 ++ ++E+ + A R DL S+L Y IP+LEK+ E + K Sbjct: 485 GDELNNVRRKIEELRAKASDAERRYDLETASDLMYYAIPDLEKRAEQLQEQARK------ 538 Query: 529 NKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSR 588 +EA S A + Sbjct: 539 ---------------------------------------------DEAEGKTSQANTVTS 553 Query: 589 AGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVG 648 +A NRPI SFLF GP+G GKT + K LA++MFD +AMVRID SE+ EKHS+SRL+G Sbjct: 554 ENIASINRPIASFLFCGPSGTGKTLMSKTLASYMFDDPDAMVRIDASEYSEKHSISRLIG 613 Query: 649 APPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVD 708 APPGYVG++EGG LTEAVRRRP+S++L+DE+EKA + + LQVLD+GRL D QGR V Sbjct: 614 APPGYVGFDEGGVLTEAVRRRPFSIVLIDEIEKAAREFVQLFLQVLDEGRLQDSQGRLVS 673 Query: 709 FRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGE 768 FRNT++IMTSNLGS I E E +++LV G +S +F PEFINRID +V F LG Sbjct: 674 FRNTIIIMTSNLGSSFINESEDEDLTESVRQLVQGAISAHFPPEFINRIDSIVTFRKLGR 733 Query: 769 QHIASIAQIQLKRLYKRLEERGYE--IHISDEALKLLSENGYDPVYGARPLKRAIQQQIE 826 + I I++K L KRL E G + + + +EA L GY P GARPL RAIQ Q+ Sbjct: 734 VDVRRIVDIRIKELQKRLIENGRQSRLVVDEEAKDWLGSIGYSPTMGARPLGRAIQDQLL 793 Query: 827 NPLAQQILSGELVPGK-VIRLEVNE 850 NPL+ IL G++ I + ++ Sbjct: 794 NPLSMLILRGQIHNDDPEIHISFDK 818 >UniRef50_B0SCX5 Endopeptidase Clp, ATP-dependent proteolytic subunit n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SCX5_LEPBA Length = 795 Score = 657 bits (1695), Expect = 0.0, Method: Composition-based stats. Identities = 338/853 (39%), Positives = 514/853 (60%), Gaps = 73/853 (8%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 + + + Q AL AQ+ A+ N I P HL+ + +G + + ++ Sbjct: 1 MKQYDSNVQGALDIAQTEAIRRQNTEITPYHLVWGFMTLPTSV-------SGKSLIRYKS 53 Query: 63 DINQALNRLPQVEG--TGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG 120 +++ L + + G ++ S L + + A + G + F+ Sbjct: 54 TVDEYLKKQARASGEIPFDSLRTSPKLAQWFTMASSRAAENGREELKEADFL-------K 106 Query: 121 TLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPV 180 L IL ++ ++ + + + ++L + A +GKLDPV Sbjct: 107 FLPQILPELKINYEDL----------------NVKETDEEVPNFLVNLNDLAREGKLDPV 150 Query: 181 IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL 240 IGR +EIR +++L RR+KNNPVL+G GVGKTAIVEGLA++I+ G VP+ LKG+ + +L Sbjct: 151 IGRSKEIRSVMEILGRRSKNNPVLVGSAGVGKTAIVEGLAEQIVKGRVPDVLKGKTIFSL 210 Query: 241 DMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLK 300 DMG L+AG KYRGEFEE+L +L + Q G ILFIDE+H +VGAGK DGAMDA N+LK Sbjct: 211 DMGQLMAGTKYRGEFEEKLTALLRYIKGQAGEAILFIDEIHQLVGAGKTDGAMDAANLLK 270 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELH 360 PALARGELHC+GATT DE+++YI D ALERRF+ V V EPS ED I IL G+++++E+H Sbjct: 271 PALARGELHCIGATTGDEFQKYILGDQALERRFRAVPVNEPSKEDAIEILMGIRDKHEIH 330 Query: 361 HHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRII 420 H ++I+D AI A+ LS +YI D+ LPDKAIDL+DEAAS++++ ++ P EL L+ I Sbjct: 331 HGIKISDEAIYASVLLSDQYITDKFLPDKAIDLVDEAASALKLSAEAMPTELVELEGEIR 390 Query: 421 QLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELE 480 K+ Q +K+ + + +E+ E+++ +E W+ E SL +IK +++ Sbjct: 391 SKKIFAQ---------VEKKNEEILKEIEVLEKKFQAGKEIWEKEVNSLKQIASIKNKID 441 Query: 481 QAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVL 540 + K ++ A++ D S L+Y +PELEK+L + IA V+ Sbjct: 442 RVKFDLDAAQQRADYTEASRLKYAVLPELEKELSTFQNSW---------ILERNHIAAVI 492 Query: 541 ARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGS 600 AR TGIPV +++++++E LL +E +L+ V GQ E++ +++ + S AG++ RP+GS Sbjct: 493 ARQTGIPVEKILKTKQENLLHLEDDLNSVVYGQKESIREIADTLLTSYAGISSETRPLGS 552 Query: 601 FLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG 660 FL GPTGVGKTE KA+A F+FD + +VR+D+SE+ EKHSV++L+GAP GY+GY+EGG Sbjct: 553 FLLKGPTGVGKTETAKAIAKFLFDQESNLVRLDLSEYSEKHSVAKLIGAPAGYIGYDEGG 612 Query: 661 YLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL 720 LTEA+RR+PYSV+L DEVEKAHPD +ILLQ+LDDGRLTD +GRT++F+NT+VI+T+N Sbjct: 613 ILTEAIRRKPYSVVLFDEVEKAHPDFSDILLQILDDGRLTDNKGRTINFKNTIVILTTNS 672 Query: 721 GSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLK 780 + + F+PE + R+D ++ +H L + + + QL+ Sbjct: 673 KNIEVD----------------------FKPEVLGRLDAILTYHSLDSSIMEKLIEKQLR 710 Query: 781 RLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVP 840 L RL+ +G I +S+ +L E G+DP +GARPL + + PLA+ ILSG +V Sbjct: 711 SLNDRLKVKGVVIELSESTEHILREQGFDPKFGARPLGSVFNRIVNRPLAKAILSGTMVE 770 Query: 841 GKVIRLEVNEDRI 853 GK R + + + + Sbjct: 771 GK-YRADWDGENL 782 >UniRef50_B7LFQ0 Putative uncharacterized protein n=1 Tax=Escherichia coli 55989 RepID=B7LFQ0_ECO55 Length = 849 Score = 657 bits (1694), Expect = 0.0, Method: Composition-based stats. Identities = 291/864 (33%), Positives = 458/864 (53%), Gaps = 45/864 (5%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +++LT + + L A + A+ + ++ LHL+ LL + L + N + Sbjct: 9 INKLTPESRNTLDSAINYAISRSHHEVDCLHLLWKLLQEHKYIAEVLYEQSLFNPEWVLN 68 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQ-KRGDNFISSELFVLAALESRGT 121 I L R+ V + S+ + +L A K + I +F+ + R + Sbjct: 69 AIESELIRINTVPQSS--PVFSESMQTLLEKTWIHASTKWQIDHIDIPVFLSTMINFRDS 126 Query: 122 -----LADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGK 176 ++D L + + + + + L KYT +L+ RAE GK Sbjct: 127 IFPLNVSDALCCDMDVAEELLISFSDEAEHSASHRPTDRSSHEYLSKYTENLSLRAETGK 186 Query: 177 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRR 236 LDPV GR++E+R+ I +L RR +NNP+L GEPGVGK++IVEGLA +I +G VP+ LK R Sbjct: 187 LDPVTGREKEVRQLIDILLRRRQNNPILTGEPGVGKSSIVEGLALQIASGRVPDVLKNVR 246 Query: 237 VLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAG 296 + ALDMGAL+AGA RGEFE RLK +L +L +G ILFIDE H+++GAG G DA Sbjct: 247 IHALDMGALLAGASVRGEFENRLKSLLTELNSLDGTAILFIDEAHSLIGAGGLPGQTDAA 306 Query: 297 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 356 N+LKPALARGEL + ATT EY++Y EKD AL RRFQ V VAEP+ + T +LR L Sbjct: 307 NLLKPALARGELRIIAATTWGEYKKYFEKDGALARRFQIVKVAEPNQDVTAEMLRSLLPM 366 Query: 357 YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 416 E HH+V I + AI A LS RY+ R+ PDK++ L+D A S + + + P+ + ++ Sbjct: 367 MEKHHNVSIREEAITATVHLSDRYLHGRRQPDKSVSLLDTACSRVAVSQSTSPDAIQDVE 426 Query: 417 RRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476 +++ + E L + + R +ML +++ E + +L+ W+ + ++ Q+ Sbjct: 427 ASLVRYQGELALL--TQERSDVLRQEMLANKIAQLEEELEQLKSAWRHQSELVAKIQSS- 483 Query: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 536 I + K ++ V + Sbjct: 484 ---------------------------DDISSKNMYRKELESAYKKDSPMVFECVDKNCV 516 Query: 537 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNR 596 A+V++ WTG+P+ ++ E++K + + L RV+GQ A+ A+++ + RA L DP + Sbjct: 517 ADVVSGWTGVPLGVCLDGEQQKASGLLRCLEQRVLGQRYAMSAIASQVLICRADLKDPVK 576 Query: 597 PIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGY 656 P G FL GP+G GKTE +ALA F++ + ++ I+M+EF E H+VS L GAPPGYVG+ Sbjct: 577 PDGVFLLAGPSGTGKTETARALAEFVYGDENKLITINMTEFQEAHTVSTLKGAPPGYVGF 636 Query: 657 EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 716 +GG LTE V PYSVILLDE+EKAHPDV Q+ D G + D +G+ V FR+ ++IM Sbjct: 637 GQGGTLTERVSHNPYSVILLDEIEKAHPDVLEFFFQIFDSGIIEDAEGKMVSFRDCLIIM 696 Query: 717 TSNLGSDLIQE--RFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASI 774 TSN S+ I GE + +KE++L + + +F F+ R ++ F PL + + I Sbjct: 697 TSNFASENITNIWNDGETNRDRIKEMLLPLFNEHFGAAFMGR-TNLIPFTPLHSKTLRDI 755 Query: 775 AQIQLKRLYKRLEERG---YEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQ 831 I++ ++ +R E+ Y+I +D + ++ + GAR + + + LA+ Sbjct: 756 VLIKIDKICQRFEQASGQMYKIEYNDSLIDWITHHCQCDKSGARDIDSVLNSTVLPVLAR 815 Query: 832 QILSGE-LVPGKVIRLEVNEDRIV 854 + E K IR+ V ++ I Sbjct: 816 YLTDSEDNRTPKKIRISVRKNNIT 839 >UniRef50_B6R3N5 Type VI secretion ATPase, ClpV1 family n=4 Tax=Proteobacteria RepID=B6R3N5_9RHOB Length = 901 Score = 656 bits (1692), Expect = 0.0, Method: Composition-based stats. Identities = 307/875 (35%), Positives = 480/875 (54%), Gaps = 40/875 (4%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 ++RL + A+ +A SL + + +Q + H + +L +Q L+ S ++ L Sbjct: 10 IERLNPCCRQAVEEAASLCVSNSHQEVTIEHFLISLASQPAVDFRLLIQSQNVDVDVLNE 69 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQ-KRGDNFISSELFVLAALESRGT 121 NR +VE S L +L +A ++G + S ++A L RG Sbjct: 70 AFRATFNRYRRVEAD-RTPTFSPLLQDLLQDAWLIASVEQGKKTVRSGAVLIALLNDRGR 128 Query: 122 LAD--------------ILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTID 167 +L+ TA + + G + L KY + Sbjct: 129 YMQMDYYPLLERVSSDTLLRQFDELTAGSFEKDHRAGQGAGGAASAGDTAEGFLHKYGTN 188 Query: 168 LTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGE 227 T+ A+ GK+DP+ RD EIR+ I++L RR KNNP+ +GE GVGKTA+ EGLA RI NGE Sbjct: 189 FTQLAKDGKIDPIFCRDNEIRQIIEILCRRRKNNPICVGEAGVGKTALAEGLALRIANGE 248 Query: 228 VPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAG 287 VPE + LD+GAL AGA +GEFE+RLKGV++++ +ILFIDE HT++GAG Sbjct: 249 VPEDFANVALWGLDVGALQAGASMKGEFEKRLKGVIDEVRSSAEPIILFIDEAHTLIGAG 308 Query: 288 KADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTI 347 G DA N+LKPALARGEL + ATT EY++Y EKD AL RRFQ V + EP++++ I Sbjct: 309 GDQGGSDAANLLKPALARGELKTIAATTWTEYKKYFEKDPALTRRFQLVKLDEPTIDEAI 368 Query: 348 AILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDS 407 I+RGLK+ YE H V IT+ AI A+ L+ RYI RQLPDKAID++D A + +R ++ Sbjct: 369 IIMRGLKKAYEEAHGVYITEEAIGASVRLAARYITGRQLPDKAIDVLDTACARVRAGANT 428 Query: 408 KPEELDRLDRRIIQLKLEQQALMKES-----DEASKKRLDMLNEELSDKERQYSELEEEW 462 P EL +++ + L E++ L ++ + +RL + ++++D E + EL Sbjct: 429 PPVELQDVEQSLQTLSWEREGLERDQLTAPLEPEQLERLKAIADQINDLEERKQELSSRL 488 Query: 463 KAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGK 522 +A+ A + +L Q + ++ E + L + A E Sbjct: 489 EAQVALAENFIAAREDLFQKQPETQE-----------EDALEQDRALLVSHKNALIEEAG 537 Query: 523 TMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSN 582 + L+ +V AEIA +++ WTGIPV+ M++ + +LL + + + + GQ+ A+DA+ Sbjct: 538 SEPLISVEVGSAEIAAIISDWTGIPVNSMVQDDYHRLLTLAETMKKAIKGQDHAIDAIEA 597 Query: 583 AIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHS 642 +R SR L +P+G F GP+GVGKTE ++ +F +E + I+MSE+ E+H+ Sbjct: 598 RLRASRLDLHKKGQPLGVFFLAGPSGVGKTETALEVSRRLFGGEEFITTINMSEYQERHT 657 Query: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702 VSRL+G+PPGYVGY EGG LTEA+R++PYSV+LLDEVEKA P+V N+ Q D G L DG Sbjct: 658 VSRLIGSPPGYVGYGEGGVLTEAIRKKPYSVVLLDEVEKADPNVLNLFYQAFDKGELADG 717 Query: 703 QGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK------ELVLGVVSHNFRPEFINR 756 +GR +D RN V +TSNLGSD I+ + + + + + + +F+P + R Sbjct: 718 EGRLIDCRNVVFFLTSNLGSDQIENWVANAEDDQVPSHGSMLKSLTPLFAQHFKPALLAR 777 Query: 757 IDEVVVFHPLGEQHIASIAQIQLKRLYKRLEE-RGYEIHISDEALKLLSENGYDPVYGAR 815 + E +V+ PL E+ +A I Q++L L + L+E + + I++ +++ GAR Sbjct: 778 M-EPLVYMPLSEEVLADIVQMRLDDLIELLKETQKIALTITEATYGRVTQMCRVASNGAR 836 Query: 816 PLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNE 850 + + IQ+Q+ L+ +IL + + ++ Sbjct: 837 LVDQVIQRQLLPTLSIEILEAGHRGEHIASITIDS 871 >UniRef50_Q1N528 ATPase with chaperone activity, ATP-binding subunit n=1 Tax=Bermanella marisrubri RepID=Q1N528_9GAMM Length = 859 Score = 656 bits (1691), Expect = 0.0, Method: Composition-based stats. Identities = 325/864 (37%), Positives = 474/864 (54%), Gaps = 51/864 (5%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAG-INAGQLR 61 +++LT +++L +A LA+ H N +E H ++LN L+ I LR Sbjct: 10 IEKLTPTLKMSLEEAAQLAMTHGNFNVEIEHWFISMLNHPHTDFLELIKKCQVIELDNLR 69 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGD-NFISSELFVLAALESRG 120 D+ +L G S+ L+ LN LA D I+S +AA+++ G Sbjct: 70 EDLAASLQYF--ESGNTRAPAFSRHLMECLNEAWLLASVDQDKEQITSAHIFIAAMKNSG 127 Query: 121 TLADI--------------LKAAGATT--ANITQAIEQMRGGESVNDQGAEDQRQALKKY 164 I L+A T AIE + ES + Q L KY Sbjct: 128 IAHQIRSIVPSLDGVNVADLEALSHTIIGKTSESAIESPQSSESTQSKQGNTQANYLSKY 187 Query: 165 TIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRII 224 +DLT +AE G++DPVIGRD+E+R+ + VL RR +NNP+L GEPGVGKTA+VEGLA RI+ Sbjct: 188 AVDLTAKAEAGEIDPVIGRDDEVRQLVDVLLRRRQNNPILTGEPGVGKTAVVEGLANRIV 247 Query: 225 NGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMV 284 +VP+ L+G R+L+LDM +L AGA +GEFE+RLK V+ ++ +I+FIDE HT++ Sbjct: 248 ANDVPQPLQGIRLLSLDMASLQAGASVKGEFEKRLKAVIEEVKTATVPIIVFIDEAHTII 307 Query: 285 GAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVE 344 GAG A+G DA N+LKPALARGE + ATT EY++Y EKD AL RRFQ V V EPS+E Sbjct: 308 GAGGAEGTGDAANLLKPALARGEFRTIAATTWSEYKKYFEKDPALTRRFQVVKVEEPSIE 367 Query: 345 DTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQ 404 I ++R L E HH+V I D AI A+ L+ RYI RQLPDK++ L+D A + + + Sbjct: 368 SAIDMMRSLASTLEQHHNVTILDEAIEASVKLAARYIPARQLPDKSVSLLDTACARVALS 427 Query: 405 IDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKA 464 + P ++ RRI Q + + L KES S L+E++ E+Q E E E A Sbjct: 428 QGATPSAIEIEQRRIEQSQTNLRLLQKESHINS-----QLDEKIEFYEKQIREAESELVA 482 Query: 465 EKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTM 524 + L Q I ++++A+ E + +L + Sbjct: 483 LEDQLEKEQAIIGQIKEAREKGES---------------------QDELADQLKAIQGES 521 Query: 525 RLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAI 584 L+ V +A ++ WTGIPV MM+ E LL +E EL RV+GQ+ A+ ++ A+ Sbjct: 522 PLVFLDVDKQAVAAIIESWTGIPVGNMMQDEINGLLSLEDELKKRVVGQDHAMQKIAQAV 581 Query: 585 RRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVS 644 R SR+GL DP +P+G F+ G +G GKTE ALA ++ ++ ++ I+MSEF E+H VS Sbjct: 582 RISRSGLTDPRKPVGVFMMAGTSGTGKTETALALAEHLYGGEDNLITINMSEFKEEHKVS 641 Query: 645 RLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQG 704 L+GA GYVGY +GG LTEAVR++PYSV+LLDE+EKAHP + ++ + D G + DG+G Sbjct: 642 MLLGASAGYVGYGQGGVLTEAVRKKPYSVVLLDEMEKAHPGIQDVFYNLFDKGTIKDGEG 701 Query: 705 RTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK--ELVLGVVSHNFRPEFINRIDEVVV 762 +DF+NT++IMT+N + I + FGE D E + + +FRP F+ R +V Sbjct: 702 NDIDFKNTLIIMTTNAATHGISKYFGETDINEEALLEDIRPELLEDFRPAFLGRCT-IVP 760 Query: 763 FHPLGEQHIASIAQIQLKRLYKRLEER-GYEIHISDEALKLLSENGYDPVYGARPLKRAI 821 + PL E + I +I ++ KRL E+ + L+ L DP GAR ++ I Sbjct: 761 YFPLSEDVLQKIIEINFNKIKKRLNEQYNASLKYDASILEHLLSKCKDPDTGARNVENVI 820 Query: 822 QQQIENPLAQQILSGELVPGKVIR 845 + I ++ L L G+ I Sbjct: 821 NKSILPAISNACLEA-LAKGQSIE 843 >UniRef50_Q6KHS7 ATP-dependent Clp protease, ATPase subunit n=3 Tax=Mycoplasma RepID=Q6KHS7_MYCMO Length = 711 Score = 656 bits (1691), Expect = 0.0, Method: Composition-based stats. Identities = 338/711 (47%), Positives = 511/711 (71%), Gaps = 9/711 (1%) Query: 148 SVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGE 207 + D LK++ +LT+ A++ L+PVIGR++EIRR I++L R+TKNNPVL+GE Sbjct: 1 MQMNYKKPDDNDPLKQFGRNLTDLAKKNMLEPVIGREDEIRRIIRILSRKTKNNPVLVGE 60 Query: 208 PGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLA 267 PGVGKTAIVEGLA++I + +VPE LK + V+ + + +L+AGA Y+G+FEER+K +++ + Sbjct: 61 PGVGKTAIVEGLAKKIHDAQVPEDLKNKEVIEISLPSLIAGASYQGQFEERIKSLMDKIE 120 Query: 268 KQEGNVILFIDELHTMVGAGK--ADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEK 325 K +G I+FIDE+H ++G GK ++ MDA N+ KPALARG++ VGATT++EYR+YIE Sbjct: 121 KNQGKYIIFIDEIHLLIGTGKNSSNSTMDAANIFKPALARGQMQLVGATTIEEYRKYIES 180 Query: 326 DAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQ 385 D+ALERR QKV VAEP++EDTI ILRG+K R+E H+V+I+D A++AAA LS RYI+DR Sbjct: 181 DSALERRMQKVKVAEPNIEDTITILRGIKGRFETFHNVKISDKALIAAANLSARYISDRF 240 Query: 386 LPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLN 445 LPDKAIDL+DEAAS+I+ +I+S+PEEL+++ ++II + E+ AL E+ S R++ LN Sbjct: 241 LPDKAIDLVDEAASTIKTEINSQPEELEKIQQKIITFETEKAALKSENTIQSNLRVEELN 300 Query: 446 EELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGK 505 EL ++ L E+W +EK + K ++E K + + + G + S++ Y Sbjct: 301 NELKKLNSEHKILSEKWISEKNVVIELNDKKRKIESLKHEVSKLQNEGLYEKASKIMYSD 360 Query: 506 IPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQE 565 +P++EK+L+ L + L++ VT+ EIAE++++WT IP+S+++E +++KLL ++ E Sbjct: 361 LPKIEKELKILENLNKEKNSLIKEDVTENEIAEIVSKWTMIPISKLLEKQKDKLLNLQSE 420 Query: 566 LHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDS 625 L +V GQ EA++ VS+ I RSRA + DPN+PIGSF+F+GPTGVGKTEL K+LA +FDS Sbjct: 421 LKKQVKGQEEAIELVSDTILRSRANINDPNKPIGSFIFMGPTGVGKTELAKSLAYVLFDS 480 Query: 626 DEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPD 685 + ++R+DMSE+ EKHS+S+++G+PPGY+GYE GG LTE +R++PYS++L DE+EKAHPD Sbjct: 481 KKQLIRLDMSEYSEKHSISKIIGSPPGYIGYENGGQLTELIRQKPYSIVLFDELEKAHPD 540 Query: 686 VFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVV 745 V N+LLQ+LDDG LTD +G+T++F+NT++IMT+NLGSDLI E+ + + + ++ Sbjct: 541 VLNVLLQILDDGILTDAKGKTINFKNTIIIMTTNLGSDLILEKVYDP------KELRKIL 594 Query: 746 SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALKLLS 804 +PEF+NRIDE++ F L + I I + +L L KR + + I D ++ +S Sbjct: 595 LKFVKPEFLNRIDEIIPFKELDKDTIKEIIENELNELEKRVYQNQTIFIKFDDSIVEYIS 654 Query: 805 ENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855 + GYD +YGARPLKR IQ +I++ +A I+SG L P + + + + +V Sbjct: 655 KQGYDNLYGARPLKRVIQNKIQSKIALNIISGNLKPNESYIILIENENLVI 705 >UniRef50_D1TDQ5 Type VI secretion ATPase n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TDQ5_9BURK Length = 910 Score = 655 bits (1690), Expect = 0.0, Method: Composition-based stats. Identities = 318/891 (35%), Positives = 472/891 (52%), Gaps = 66/891 (7%) Query: 1 MRLD------RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAG 54 M +D RL + +LA+ A L + + ++ HL+ LL + + +L Sbjct: 1 MDIDIRTLLSRLNPECKLAMEQAAQLCVRQTHYNVDVEHLLLTLLESDAPDLKAILAHFA 60 Query: 55 INAGQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQ-KRGDNFISSELFVL 113 + L + + ++ + G G S + + L+ G+ I S VL Sbjct: 61 VKPETLSAQLQKTVDGFKR--GNGRTPALSPNFSPLFQEAWLLSSMLLGEQQIRSGTLVL 118 Query: 114 AALESRGTLADILKAAGATTANITQAIEQMRG---------------------------- 145 A LE +L++A A A+ Sbjct: 119 ALLEVDTLRGMLLESAPALLNFPRAALRDRLAAILAGSSEDAGGSHMPGQDSEAAQPGAA 178 Query: 146 --------------GESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTI 191 G ++ AL+ YT+D+T A +GK+DP+ GRD EIR+ I Sbjct: 179 SASASSAARETGAMPNIAGGAGGSGRKSALELYTVDMTGLAREGKIDPIRGRDAEIRQLI 238 Query: 192 QVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKY 251 VL RR +NNP+L GE GVGKTA+VEG AQRI+ G+VP L V +LD+ L AGA Sbjct: 239 DVLLRRRQNNPILTGEAGVGKTAVVEGFAQRIVQGDVPPALVNVSVRSLDLALLQAGAGV 298 Query: 252 RGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCV 311 +GEFE RLK V+ ++ VILFIDE H ++GAG ++G DA N+LKPALARGEL + Sbjct: 299 KGEFENRLKSVIAEVKASPVPVILFIDEAHQLIGAGGSEGQGDAANLLKPALARGELRTI 358 Query: 312 GATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIV 371 ATT EY++Y+E+D AL RRFQ V V EPS I +LRG+ ++ E HH V+I D A+ Sbjct: 359 AATTWAEYKKYVERDPALARRFQVVKVEEPSEAVAIDMLRGMVQKLEEHHGVEILDDAVR 418 Query: 372 AAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMK 431 A LSHRYI+ RQLPDKAI ++D A + + + PEE++ L R I + + + L Sbjct: 419 DAVKLSHRYISGRQLPDKAISVLDTACARVAIGQSGTPEEIEALGRTIEAAERQLRILRH 478 Query: 432 ESDEASKKRLDM--LNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQA 489 E+ + + + ++L D Q S L ++ EK ++ + ++ + A Sbjct: 479 EAATGADRADAIAVTTKQLDDARAQRSRLTDKLATEKRAVEEILAWRKKIRGYLSDPDSA 538 Query: 490 RRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVS 549 D A ++ + LEK LEA E ++ V +A+V++ WTGIPV Sbjct: 539 ADGEDAASLA----VNLSRLEKGLEAMQNDE----PMVPVCVDSETVAQVISGWTGIPVG 590 Query: 550 RMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGV 609 RM+ E +L ++ +L RV+GQ+EA+DA++ +R RA L DP +P+G FL +GP+GV Sbjct: 591 RMLADELHTVLYLQDKLAERVVGQDEALDAIARRVRTFRADLDDPGKPVGVFLLVGPSGV 650 Query: 610 GKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRR 669 GKTE ALA+ ++ + M+ ++MSEF E HSVS L GAPPGYVGY GG LTEAVRRR Sbjct: 651 GKTETACALADMLYGGERNMITVNMSEFQEAHSVSGLKGAPPGYVGYGRGGVLTEAVRRR 710 Query: 670 PYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERF 729 PYSV+LLDE+EKAHPDV + QV D G + DG+G +DF+NT++++TSN D+I E Sbjct: 711 PYSVVLLDEMEKAHPDVLELFFQVFDKGVMEDGEGVPIDFKNTLILLTSNAAQDVITEAS 770 Query: 730 GELDYAHMKELV---LGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRL 786 EL+ + F P F+ R+ +V ++ LG+ I +I ++L+RL +R Sbjct: 771 RGGRRPPPDELIEKLRPALLRQFSPAFLGRL-VLVPYYHLGDAQINAIVNLKLERLAQRF 829 Query: 787 -EERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSG 836 + D+ L+++ + GAR + + Q + LA+Q+L Sbjct: 830 ERNHHAGLTWDDDVATLIAQRCKEVDSGARNVDHILTQSVLPELARQVLER 880 >UniRef50_C6HIF6 Heat shock protein n=1 Tax=Ajellomyces capsulatus H143 RepID=C6HIF6_AJECH Length = 762 Score = 655 bits (1689), Expect = 0.0, Method: Composition-based stats. Identities = 364/721 (50%), Positives = 495/721 (68%), Gaps = 42/721 (5%) Query: 140 IEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTK 199 GG + G E ++ AL+ Y +DLT RA+ GKLDPVIGRD EI+RTIQ+L RRTK Sbjct: 65 RPHPPGGTHRMNLGGEPEKPALEAYGVDLTARAKDGKLDPVIGRDGEIQRTIQILSRRTK 124 Query: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259 NNPVLIG G GKTAI+EGLAQRI+ G+VPE +K +RV+ALD+G L+AGAK+RG+FEERL Sbjct: 125 NNPVLIGSAGTGKTAILEGLAQRIVRGDVPESVKDKRVIALDLGQLIAGAKFRGDFEERL 184 Query: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319 K VL ++ +G VILF+DELHT++G GKA+G++DA N+LKPAL+RGEL C GATTL+EY Sbjct: 185 KKVLKEVEDAQGGVILFVDELHTLLGLGKAEGSIDASNLLKPALSRGELQCCGATTLNEY 244 Query: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379 RQ IEKD AL RRFQ + V EPSV DTI+ILRG+KE+YE+HH V+ITD A+VAAAT S+R Sbjct: 245 RQ-IEKDVALARRFQPILVEEPSVPDTISILRGIKEKYEVHHGVRITDGALVAAATYSNR 303 Query: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439 YI DR LPDKAIDL+DEAAS++R+Q +SKP+ + LDR+I+ +++E ++L KE+D SK+ Sbjct: 304 YITDRYLPDKAIDLVDEAASALRLQQESKPDAIQELDRQIMTIQIELESLRKETDITSKE 363 Query: 440 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499 R + L E L K+ + EL W+ EKA L + K +LE+A++ +E A+R G+ A+ S Sbjct: 364 RREKLEELLKTKQNKVKELTAVWEKEKAELDTIKQAKEDLERARVELELAQRQGNFAKAS 423 Query: 500 ELQYGKIPELEKQL-----EAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMES 554 EL+Y IP LE +L E AT LL + VT +IA V++R TGIPV+++M Sbjct: 424 ELRYSIIPGLESKLPKEGSETATTTTADGEVLLHDSVTSDDIAAVVSRTTGIPVNKLMAG 483 Query: 555 EREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTEL 614 E EKL+ ME L V GQ+EA+ AV+NA+R RAGL+ N+P+ SF+FLGPTGVGKTEL Sbjct: 484 EIEKLINMEDTLRQSVRGQDEALSAVANAVRMQRAGLSGENKPLASFMFLGPTGVGKTEL 543 Query: 615 CKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVI 674 CK +A F+F ++ A++R DMSEF EKH+VSRL+G+P GYVG G RRR Sbjct: 544 CKKMAGFLFSTETAVLRFDMSEFQEKHTVSRLIGSPAGYVGTSPSG-----PRRR----- 593 Query: 675 LLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLI---QERFGE 731 LTD QG +DFRNT++++TSNLG++++ GE Sbjct: 594 -----------------------LLTDAQGHKIDFRNTLIVLTSNLGAEMLVAADSSVGE 630 Query: 732 LDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGY 791 + +K V+ +V ++ PEF+NRIDE ++F L + + I I+L+ L +RL++R Sbjct: 631 EISSDIKAAVMSIVQSSYPPEFLNRIDEFIIFKRLSKPALRDIVDIRLQELQQRLDDRRI 690 Query: 792 EIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNED 851 + + D L + GYDP YGARPL R I ++I N LA +I+ GE+V G+ + + N D Sbjct: 691 TLTVEDNVKDWLCDKGYDPRYGARPLNRLISKEIGNRLADKIIRGEVVTGQGVSVIFNAD 750 Query: 852 R 852 + Sbjct: 751 K 751 >UniRef50_B8EIH7 Type VI secretion ATPase, ClpV1 family n=56 Tax=Proteobacteria RepID=B8EIH7_METSB Length = 904 Score = 655 bits (1689), Expect = 0.0, Method: Composition-based stats. Identities = 312/882 (35%), Positives = 470/882 (53%), Gaps = 53/882 (6%) Query: 5 RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDI 64 +L A A G N+ +E H ++ ++ +E ++ ++ +L +DI Sbjct: 12 KLNRIGYETFIQALRQAKGAGNRNVELAHWLAHIMQKERSDLALTADHFKLDRAKLASDI 71 Query: 65 NQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKR-GDNFISSELFV----------- 112 + ++ + S LV +L+ A G+ I + + Sbjct: 72 ARTIDGFRR--NETEMPGVSNTLVDLLDRGWHYATLFFGETQIRTGHVLAGALKSLELRR 129 Query: 113 --------LAALESRGTLADILKAAGATTANITQAIE----QMRGGESVNDQGAEDQRQA 160 A + + + Q ++ G A Sbjct: 130 AFTSISPEFAKIPGDALTNEYRSLWAGSDEENLQPMDGSGLSAAGTPGAEQAQGAKGTTA 189 Query: 161 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220 L +++ DLT RA G++DPV+GRD+EIR+ I VL RR +NNP+L GE GVGKTAIVEGLA Sbjct: 190 LDRFSQDLTARAATGEMDPVLGRDDEIRQIIDVLMRRRQNNPILTGEAGVGKTAIVEGLA 249 Query: 221 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280 QRI +VP L+G R+LALD+ + AGA +GEFE+RL+ V++++ +ILFIDE Sbjct: 250 QRIAASDVPPALRGVRLLALDITLMQAGASMKGEFEQRLRSVIDEVQASPKPIILFIDEA 309 Query: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340 HT++GAG A G DA N+LKPALARG L + ATT EYRQY EKD AL RRFQ V V E Sbjct: 310 HTLIGAGGAAGTGDAANILKPALARGTLRTIAATTWAEYRQYFEKDPALTRRFQPVQVDE 369 Query: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400 P V +LRG+ E HH V+I+D AIVAA LSHRYI R LPDKA+ L+D + Sbjct: 370 PDVARCCVMLRGVLAPMEKHHKVRISDAAIVAAVNLSHRYIPARLLPDKAVSLLDTTCAR 429 Query: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEA--SKKRLDMLNEELSDKERQYSEL 458 + + ++ P ++ L+ E+ AL ++D ++R+ ++ EL++ + + + L Sbjct: 430 VAISQNATPAAVEDARVAANALEAEKAALTTDADLGDLDEERIGEIDAELAELKEKSAAL 489 Query: 459 EEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQ 518 EEEW E+A + ++ E+ + EQ K L ++ A+ Sbjct: 490 EEEWAKERALIEEIVKLRREISENPADAEQ----------------KRVALRDKI-ASLG 532 Query: 519 LEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVD 578 R++ V D +A V++ WTGIPV RM++ E E +LR+ + L+ RV+GQ+ + Sbjct: 533 GVDPEKRMIYAHVDDQSVAAVVSDWTGIPVGRMVKDEIENVLRLPEILNRRVVGQSHGLA 592 Query: 579 AVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFM 638 ++ I +RAGL +P++PIG F+ GP+GVGKTE ALA ++ ++ ++ I+MSEF Sbjct: 593 MIAKRIETNRAGLDNPSKPIGVFMLCGPSGVGKTETALALAEALYGGEQNIITINMSEFQ 652 Query: 639 EKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGR 698 E H+VS L GAPPGYVGY EGG LTEAVRR+PYSV+LLDE+EKAHPDV + QV D G Sbjct: 653 EAHTVSGLKGAPPGYVGYGEGGRLTEAVRRKPYSVVLLDEIEKAHPDVHELFFQVFDKGV 712 Query: 699 LTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVS----HNFRPEFI 754 + DG GR +DF+NT++I+TSN+G+D I R + +A E + + F P + Sbjct: 713 MEDGTGRRIDFKNTLIILTSNVGTDTIMRRAEDPAFAGDAEALAAELRPDLLQVFPPALL 772 Query: 755 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLE-ERGYEIHISDEALKLLSENGYDPVYG 813 R+ + + PL +A I ++QL R+ KR+ + + D + + DP G Sbjct: 773 GRL-VTIPYLPLSPSMLAGIVRLQLGRIGKRIRAAQDADFSYDDAVVDHIVSLCNDPDSG 831 Query: 814 ARPLKRAIQQQIENPLAQQILSGEL--VPGKVIRLEVNEDRI 853 R + I + L+++ L L K R+ + + Sbjct: 832 GRIIDNIINNTLLPALSREFLKRTLAKQELKEARVAMKDGAF 873 >UniRef50_A5WFU1 ATP-dependent Clp protease ATP-binding subunit ClpA n=5 Tax=Proteobacteria RepID=A5WFU1_PSYWF Length = 854 Score = 653 bits (1685), Expect = 0.0, Method: Composition-based stats. Identities = 310/861 (36%), Positives = 477/861 (55%), Gaps = 60/861 (6%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 L+ +++L A +LA ++++ H L E + L S G + LR+D+ Sbjct: 2 LSRHLEVSLRLAMTLARQKSHEYLTVEH--LLLALLENNNAVTTLKSCGADISSLRSDLE 59 Query: 66 QALNR-LPQVEGTGGD-VQPSQDLVRVLNLCDKLAQKRGD-NFISSELFVLAALESRGTL 122 +++ P+++ Q +Q R+L Q G + +++ T Sbjct: 60 AYIDKHTPKLDADLEQTPQATQGFDRILQRAIFHVQSIGSGRLVQGSDILVSMFSEHDTY 119 Query: 123 A-DILKAAGATTANIT----------QAIEQMRGGESVNDQGAEDQRQALKKYTIDLTER 171 A +LK G + +T + E E + + A ++ L ++ ++L +R Sbjct: 120 AVYLLKKQGVSRLELTQYLSHGNEGDETREGPSDNEGADPKAARAKKDPLTEFAVNLNKR 179 Query: 172 AEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEG 231 A +GK DP+IGR EI RT QVL RR KNNP+L+G+PGVGKT+I EGLA IIN + P+ Sbjct: 180 AAEGKTDPLIGRSSEIERTAQVLCRRRKNNPLLVGDPGVGKTSIAEGLAWLIINNKAPKP 239 Query: 232 LKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKA-D 290 L+G + +LD+G+L+AG KYRG+FE+R+K +L++L K+ N ILFIDE+H ++GAG + Sbjct: 240 LQGCVIYSLDIGSLIAGTKYRGDFEKRMKALLDELKKKP-NAILFIDEVHMIIGAGSSMS 298 Query: 291 GAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAIL 350 MD N++KPALA GEL C+G+TT EYRQ EKD AL RRFQK+ V EPSV+D+I IL Sbjct: 299 SNMDVSNLIKPALANGELRCIGSTTFTEYRQVFEKDHALSRRFQKIDVNEPSVDDSIEIL 358 Query: 351 RGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPE 410 RGLK RYE H+V+ TD A+V+A LS ++I +R LPDKAID+IDEA + R+ + Sbjct: 359 RGLKSRYEEFHNVKYTDAALVSAVQLSAKHIHERFLPDKAIDVIDEAGAYKRLGVTPDAA 418 Query: 411 ELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLS 470 ++ E + ++E + ++ Sbjct: 419 QV---------------------------------------EEENQLIDELNSTDVNAVD 439 Query: 471 GTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNK 530 + I+ D + + +E E + + Sbjct: 440 LNDDVLGNKTDYDAQIDADESGLDAEANDDNDDDALESVESDFEDTDEALDDETQAAPTV 499 Query: 531 VTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590 + +I ++++ IP + ++ L +E++L+ V GQ+EA+ +S+AI+ SRAG Sbjct: 500 IDVEDIEAIISKLARIPPKSVSNDDKSLLQHLERDLNRLVFGQDEAIKTLSDAIKLSRAG 559 Query: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAP 650 L ++PIGSF+F GPTGVGKTE+ K LAN M ++R DMSE+ME H+ SRL+GAP Sbjct: 560 LKSADKPIGSFMFAGPTGVGKTEVSKQLANLM---GIELIRFDMSEYMEAHTASRLIGAP 616 Query: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFR 710 PGYVG+++GG LTE + + P+ V+LLDE+EKAHPDVFN+LLQV+D G LTD GR F+ Sbjct: 617 PGYVGFDQGGLLTEKINQHPHCVLLLDEIEKAHPDVFNLLLQVMDHGSLTDNNGRVASFK 676 Query: 711 NTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQH 770 ++IMT+N+G++ I + ++ F PEF NR+D ++ F+PL Sbjct: 677 QVILIMTTNVGAENISRSSMGFTKQDHSKDNTEAMNRVFTPEFRNRLDAIIQFNPLDPSI 736 Query: 771 IASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLA 830 + S+ L L +L+++ + I DE + L+E GYD + GARP++R IQ +I+ PLA Sbjct: 737 VVSVVDKFLVELQAQLDDKQVMLEIDDEVREYLAEKGYDRLMGARPMQRLIQNEIKKPLA 796 Query: 831 QQILSGELVPGKVIRLEVNED 851 +L G+L G + + ++ED Sbjct: 797 NMVLFGDLAEGGAVHVTLSED 817 >UniRef50_Q030Z1 ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones n=5 Tax=Lactococcus lactis RepID=Q030Z1_LACLS Length = 816 Score = 653 bits (1683), Expect = 0.0, Method: Composition-based stats. Identities = 345/884 (39%), Positives = 504/884 (57%), Gaps = 97/884 (10%) Query: 1 MRLD--RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAG 58 M+ + + T A A + IE HL++A+ G +L +++ Sbjct: 1 MKFENVKYTPTLDRIFEKAAEDAHQYQYGTIESAHLLAAMATTSGSIAYSILAGMNVDSS 60 Query: 59 QLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES 118 L D+ V+ +++ S V+ + LA + +E + A L+ Sbjct: 61 DLLIDLEDL---SSHVKVKRSELRFSPRAEEVVTVASFLAVHNNAEAVGTEHLLYALLQV 117 Query: 119 RGTLADIL----------------KAAGATTANITQAIEQMRGGESVNDQGAEDQRQALK 162 L K G +A+ M + L Sbjct: 118 EDGFGIQLLKLQKINIVSLRKEIEKRTGLKVPENKKAVTPMSKRKMAKGVAENSSTPTLD 177 Query: 163 KYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQR 222 + DLTE A GKLDP+IGR+ E+ R I +L RRTKNNPVL+GEPGVGK+AI+EGLAQR Sbjct: 178 SVSSDLTEAARSGKLDPMIGREAEVDRLIHILSRRTKNNPVLVGEPGVGKSAIIEGLAQR 237 Query: 223 IINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHT 282 I+NG+VP GL R++AL+M +VAG K+RGEFE+RL ++ +++ + +VI+FIDELHT Sbjct: 238 IVNGQVPIGLMNSRIMALNMATVVAGTKFRGEFEDRLTAIVEEVS-ADPDVIIFIDELHT 296 Query: 283 MVGAGKA-DGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEP 341 ++GAG D DA N+LKPALARG+ VGATT EY++YIEKD ALERR ++ V EP Sbjct: 297 IIGAGGGMDSVNDAANILKPALARGDFQMVGATTYHEYQKYIEKDEALERRLARINVDEP 356 Query: 342 SVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSI 401 S ++ IAIL+GL+E++E +H V+ T D+AI + Sbjct: 357 SPDEAIAILQGLREKFEDYHQVKFT---------------------DQAIKSAVTLSVRY 395 Query: 402 RMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEE 461 + +D LD E A +K S + + + L ++L + + +E + Sbjct: 396 MTSRKLPDKAIDLLD--------EAAAAVKISVKNQETKRLELEKDLVKAQEELAEAVIK 447 Query: 462 WKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEG 521 + S ++ + ++ ++ + E Sbjct: 448 LD--------------------------------VKASRIKEKAVEKISDKIYKFSIKEE 475 Query: 522 KTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVS 581 K R +VTD + V + TG+P+++M +SE ++L+ +E+ELH RV+GQ EA+ AVS Sbjct: 476 K-----RQEVTDQAVIAVASTLTGVPITQMTKSESDRLINLEKELHKRVVGQEEAISAVS 530 Query: 582 NAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKH 641 AIRR+R+G+AD RP+GSF+FLGPTGVGKTEL KALA+ +F S++ M+R+DMSEFMEKH Sbjct: 531 RAIRRARSGVADSRRPMGSFMFLGPTGVGKTELAKALADSVFGSEDNMIRVDMSEFMEKH 590 Query: 642 SVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTD 701 S SRL+GAPPGYVGY+EGG LTE VR +PYSV+LLDEVEKAHPDVFNI+LQ+LDDG +TD Sbjct: 591 STSRLIGAPPGYVGYDEGGQLTERVRNKPYSVVLLDEVEKAHPDVFNIMLQILDDGFVTD 650 Query: 702 GQGRTVDFRNTVVIMTSNLGSDLIQERFG--------ELDYAHMKELVLGVVSHNFRPEF 753 +GR VDFRNT++IMTSNLG+ +++ DY+ M+ +L + ++RPEF Sbjct: 651 TKGRKVDFRNTIIIMTSNLGATALRDDKTVGFGAKNITADYSAMQSRILEELKRHYRPEF 710 Query: 754 INRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYG 813 +NRIDE +VFH L Q I I +I K L KRL E+ + ++ A+KL++E G+DP YG Sbjct: 711 LNRIDENIVFHSLESQEIEQIVKIMSKSLIKRLAEQDIHVKLTPSAIKLIAEVGFDPEYG 770 Query: 814 ARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857 ARPL++A+Q+++E+ L++Q+LSGE+ G I + + +I Q Sbjct: 771 ARPLRKALQKEVEDLLSEQLLSGEIKAGNHISIGASNKKIKIAQ 814 >UniRef50_B7H4I2 Type VI secretion ATPase, ClpV1 family n=26 Tax=Bacteria RepID=B7H4I2_ACIB3 Length = 893 Score = 651 bits (1680), Expect = 0.0, Method: Composition-based stats. Identities = 322/885 (36%), Positives = 481/885 (54%), Gaps = 57/885 (6%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQE-GGSVSPLLTSAGINAGQLR 61 + +L+ + AL + + + N IE HL LLNQ + LL I+A L Sbjct: 9 ITKLSTAARTALEKSANACVLQQNYEIEIEHLFLELLNQPLENDLKILLKKYKISADALA 68 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGT 121 D+ + +++LP+ G ++ +VR+ LA + I S ++A L + Sbjct: 69 DDLKETISQLPK--GNTRTPIFAKSIVRLFEQAWLLASAEQNPVIRSGHLLVALLTAPDL 126 Query: 122 LA----------------------DILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQ 159 +I + + + + ++ + Sbjct: 127 YQIATRASSLFDLFPIDSMKHKFLEICEKSVEQQEESKTSSQADELEQAATPTAKTQKTP 186 Query: 160 ALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGL 219 AL +YTI+LTE+A+ G +DPVIGR+ EIR + +L RR +NNP+L GEPGVGKTA+VEGL Sbjct: 187 ALDQYTINLTEKAKNGGIDPVIGREYEIRLMLDILMRRRQNNPILTGEPGVGKTAVVEGL 246 Query: 220 AQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDE 279 A +I G VPE LK + LDMG L AGA +GEFE RLK V+ ++ +ILFIDE Sbjct: 247 ALKIAQGLVPEALKNVHLHVLDMGLLQAGASVKGEFENRLKQVIQEVQSSAHPIILFIDE 306 Query: 280 LHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVA 339 HT++GAG G DA N+LKPALARGEL + ATT EY+QY EKDAAL RRFQ V V Sbjct: 307 AHTLIGAGGQAGQNDAANLLKPALARGELRTIAATTWAEYKQYFEKDAALSRRFQVVKVE 366 Query: 340 EPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAAS 399 EP+ E + +LR + + H ++QI D AIV A SHRYI+ RQLPDKA+ ++D AA+ Sbjct: 367 EPTEEVAVDMLRAMIPVMQKHFNLQIDDEAIVTAVHASHRYISGRQLPDKAVSVLDTAAA 426 Query: 400 SIRMQIDSKPEELDRLDRRIIQLKLEQQAL--MKESDEASKKRLDMLNEELSDKERQYSE 457 + + +++P +LD+L + LKLEQQ L +RL+ L +L + + E Sbjct: 427 RVALTQNAQPVKLDQLKAQEHNLKLEQQILENEHRQIPIHHERLENLKNQLESLQSEIQE 486 Query: 458 LEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAAT 517 +E+W+ E + Q ++A+ Y +I + K L Sbjct: 487 TQEQWQKELELVRKIQELEAQ----------------SHSNESEAYDQINLIRKDLADI- 529 Query: 518 QLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAV 577 L+ +V I E+++ WTGIPV +M+ E +++L +E +L RV+GQ+ A+ Sbjct: 530 ---QGQQPLVFERVNSQIINEIISDWTGIPVGKMVNDEIKQILTLEDKLGERVMGQDYAL 586 Query: 578 DAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEF 637 + I+ S+A L DPN+P G FL +GP+GVGKTE ALAN ++ ++ ++ I+MSE+ Sbjct: 587 TQLVQGIKTSKAKLEDPNKPQGVFLLVGPSGVGKTETALALANELYGGEQHLITINMSEY 646 Query: 638 MEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDG 697 E H+VS L GAPPGYVGY +GG LTEAVRR PYSV+LLDE+EKAH DV + QV D G Sbjct: 647 QEAHTVSSLKGAPPGYVGYGQGGVLTEAVRRNPYSVVLLDEIEKAHSDVQELFYQVFDKG 706 Query: 698 RLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK------ELVLGVVSHNFRP 751 L DG+GR +DF+NT +++TSN GS I + E + + F+P Sbjct: 707 TLEDGEGRVIDFKNTTILLTSNTGSSAIMQACLNQPVEEWPTAEDLIEHLKPSLYKQFKP 766 Query: 752 EFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEER-GYEIHISDEALKLLSENGYDP 810 F+ R+ +V + PL + + I + +L ++ R+E++ G E+ SD+ ++LL + Sbjct: 767 AFLGRM-RIVPYFPLHDDLLVRIIKHKLGKITARIEKQYGTEVQYSDDLVELLLSRCTEV 825 Query: 811 VYGARPLKRAIQQQIENPLAQQIL--SGELVPGKVIRLEVNEDRI 853 GAR + + + LA +IL + K+I ++ +D I Sbjct: 826 DSGARNVDNILNSTVLPALATEILVALADQKLPKLIMIDAKDDEI 870 >UniRef50_C5NWX3 Negative regulator of genetic competence ClpC/MecB n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NWX3_9BACL Length = 824 Score = 651 bits (1680), Expect = 0.0, Method: Composition-based stats. Identities = 330/885 (37%), Positives = 489/885 (55%), Gaps = 93/885 (10%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 R + L A+ A + + HL+ A+L+ + +L G+ R Sbjct: 1 MYIRFNETALMVLTTAKEEANDFGVKAVGTEHLLLAMLSMQNTISCKVLNRHGVYYDDFR 60 Query: 62 TDI----NQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALE 117 + L + + VR + + A ++SE +L+ LE Sbjct: 61 KSVVDFYEAELEGTDFYRNVLMKIDYTNGAVRTIENSQRYADDTSSFVVTSEHLLLSLLE 120 Query: 118 SRGTLADIL--KAAGATTANITQAIEQMRGGESV-------------NDQGAEDQRQALK 162 A L G + + + + + + + L Sbjct: 121 EETGTAVRLLTDKLGINVDALVDELFDLVKKNHALVSKLYEGFKKITESENSSSKTKTLN 180 Query: 163 KYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQR 222 DLT A KLDPV+ RD+EI R I++L RRTKNNPVLIGEPGVGKTAIVEGLA+R Sbjct: 181 SLAKDLTRDAFNNKLDPVLARDKEITRMIEILNRRTKNNPVLIGEPGVGKTAIVEGLAER 240 Query: 223 IINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHT 282 I++ VP L G+RV+ LDMG L+AG KYRGEFEERLK ++ ++ G++ILFIDE+HT Sbjct: 241 IVSQNVPSNLLGKRVMVLDMGTLLAGTKYRGEFEERLKNIIAEIEDA-GDIILFIDEIHT 299 Query: 283 MVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPS 342 ++GAG ++G+ DA N+LKPAL+RG + C+GATT +EYR+Y EKDAALERRFQ + V EPS Sbjct: 300 IIGAGGSEGSADASNILKPALSRGLIQCIGATTTEEYRKYFEKDAALERRFQPIKVEEPS 359 Query: 343 VEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIR 402 ED+I IL GL+ +YE HH V+I D AI +A LS YI DR LPDKAIDLIDEA S ++ Sbjct: 360 TEDSIKILEGLRHKYEEHHDVEILDEAICSAVKLSTTYITDRCLPDKAIDLIDEACSKVK 419 Query: 403 MQIDSKPEELDRLDRRIIQLKLEQQALMKESD-EASKKRLDMLNEELSDKERQYSELEEE 461 ++ P++L + + +L E+ + + E + K+ D +N+ +S E ++ Sbjct: 420 LRYYKSPDKLKEYEDELTRLNKEKDRAVINQEFEIAAKKRDEVNKVISKIEEFKISWQDS 479 Query: 462 WKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEG 521 +K ++ + + A + +++E + ++ +LE+ L + Sbjct: 480 LSKDKIKITS---------EHIAEVLAAWTGVPVTKLTESESERLLKLEEILHKRVIGQD 530 Query: 522 KTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVS 581 + + L V Sbjct: 531 EAVVSLAKAVRR------------------------------------------------ 542 Query: 582 NAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKH 641 +R+G PNRPIGSF+FLGPTGVGKTEL K+L+ +F S++ M+RIDMSE+ME H Sbjct: 543 -----ARSGFKAPNRPIGSFIFLGPTGVGKTELAKSLSEALFSSEDNMIRIDMSEYMEPH 597 Query: 642 SVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTD 701 S+SRLVGAPPGYVGYEE G L+E VR++PYSV+L DE+EKAHP +FNILLQVLDDGRLTD Sbjct: 598 SISRLVGAPPGYVGYEEVGQLSEQVRQKPYSVVLFDEIEKAHPSIFNILLQVLDDGRLTD 657 Query: 702 GQGRTVDFRNTVVIMTSNLGSDLIQERFG---------ELDYAHMKELVLGVVSHNFRPE 752 GR +DF+NT++IMTSN+G + ++ + DY +++ ++ + +RPE Sbjct: 658 ASGRVIDFKNTIIIMTSNVGVSELNDQKFVGFGGSDSIKNDYKNVQNTMMEALKKQYRPE 717 Query: 753 FINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVY 812 F+NRID+++VF L ++ + I+++ + L KRLE+R I ++ +A+ + E+G Y Sbjct: 718 FLNRIDDIIVFKTLEKEELEKISELLIDGLSKRLEDRNITIKLTKKAMAKIVEDGSIKEY 777 Query: 813 GARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857 GARPLKR+IQ+ IE+ L++++L + G I ++ +D V + Sbjct: 778 GARPLKRSIQKNIEDLLSEELLQNPELTG-TINIDYKKDSFVVKK 821 >UniRef50_C1MLM7 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MLM7_9CHLO Length = 886 Score = 650 bits (1676), Expect = 0.0, Method: Composition-based stats. Identities = 342/782 (43%), Positives = 500/782 (63%), Gaps = 63/782 (8%) Query: 133 TANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQ 192 +I G V +++ AL+++ D+TE A+QG LDP++GRD+E+RR + Sbjct: 86 PHDIAPKNMTTTGTLGVRGDDPDEELSALERFCTDVTEEAKQGVLDPLVGRDDEVRRLVH 145 Query: 193 VLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYR 252 +L RRTKNNP+L+G PGVGKTAIVEGLAQRI+ G+VP L G R+L LD+GA+ AG + Sbjct: 146 ILCRRTKNNPILLGRPGVGKTAIVEGLAQRIVAGDVPTSLLGARLLELDLGAVGAGCQMP 205 Query: 253 GEFEERLKGVLNDLAKQ--EGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHC 310 GEFEERL V++++ + +G +I+FID++H + G + +LKPAL RG L C Sbjct: 206 GEFEERLSIVVSEVVEASQKGGIIMFIDDIHNLC--PPPPGGNNGAAILKPALGRGLLKC 263 Query: 311 VGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAI 370 +GA+T++++++ IE+DAALERRFQ+V VAEP + T+++LRGL+ RYE HH ++I + A+ Sbjct: 264 IGASTVEKFKKSIEQDAALERRFQQVPVAEPDIAQTVSVLRGLRPRYETHHSIKIHESAV 323 Query: 371 VAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALM 430 VAAA L+ RY+ R LPDKAIDL+DEAA+++RMQ KPE+LD +DR++ QL E+ + Sbjct: 324 VAAAKLASRYVQGRCLPDKAIDLLDEAAAAVRMQKSLKPEDLDVVDRKMSQLCKERDQIK 383 Query: 431 KESDEASKKR--------------LDMLNEELSDKERQYSELEEEWKA------------ 464 E K + L E + +++ +LE+E KA Sbjct: 384 ARLIEDMHKHGSGGKMAASCLHELNEELVRERTKQQKLLRDLEKEKKASREYKRATAELS 443 Query: 465 --EKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIP--------------- 507 E+ ++ + + + K +R D +E+ K Sbjct: 444 FSERRLVNAHEKQRQAADNVKKVTVALQRAQDTDNQAEVLEAKAAATRAEQDAKLADKET 503 Query: 508 ------------ELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESE 555 E K E + + +++VTD +IA V++RWTG+PV++++ SE Sbjct: 504 LHLSEIIARAKVECTKAEEEIMSISEGNGLMTKDEVTDVDIATVVSRWTGVPVAKLVASE 563 Query: 556 REKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELC 615 + KLL+++ ELH RVIGQ+ AV +V+ A++RSRA L+DPN P+ SF+FLGPTGVGKTEL Sbjct: 564 KAKLLQLDAELHQRVIGQDHAVTSVAEAVQRSRADLSDPNGPVASFMFLGPTGVGKTELA 623 Query: 616 KALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVIL 675 KALAN++F+SD A++R+DMSE+MEKHSV+RL+GAPPGY+GY+EGG LT+AVR++PYS++L Sbjct: 624 KALANYLFNSDNALIRLDMSEYMEKHSVARLIGAPPGYIGYDEGGMLTDAVRQKPYSIVL 683 Query: 676 LDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLI----QERFGE 731 DE+EKAH DVFN+LLQ+LD+G +TD QGRTV FRN ++IMTSNLGSD I + R G Sbjct: 684 FDEIEKAHVDVFNVLLQLLDEGHVTDTQGRTVSFRNCLIIMTSNLGSDEIAFGDRGRRGR 743 Query: 732 LDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGY 791 MK+ V+ V +FRPEFINR+DE +VF PL I I Q+Q +L +R+E + Sbjct: 744 RGPGEMKDKVMAHVRAHFRPEFINRLDEFIVFEPLSHSQIMEIVQLQCNKLVERVEGQRM 803 Query: 792 EIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNED 851 ++ + A+ L+ G+DP YGARP+KRAIQ ++ +A ++L G I + ++D Sbjct: 804 KLDLQPSAIDYLARKGFDPTYGARPVKRAIQSELIQNMANKLLRGIFQEDDTIVVSADKD 863 Query: 852 RI 853 + Sbjct: 864 GL 865 >UniRef50_C5ALE8 ATPases with chaperone activity, ATP-binding subunit n=3 Tax=Burkholderia RepID=C5ALE8_BURGB Length = 933 Score = 649 bits (1674), Expect = 0.0, Method: Composition-based stats. Identities = 303/895 (33%), Positives = 462/895 (51%), Gaps = 51/895 (5%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +L +L A + + N ++E +H + L+ G + ++ I+ +L Sbjct: 9 FGKLGTTLFRSLESATTFSKLRGNPYVELVHWLHQLIALADGDLQRIVRHCEIDRARLDR 68 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTL 122 D+ AL LP G+ D S + + LA +++AAL L Sbjct: 69 DLQDALAALPSGAGSLSD--FSHHVDAAIERAWVLATLVFGEHRIRGAWLMAALIETPEL 126 Query: 123 ADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQ----------------------- 159 +L + I + D Sbjct: 127 RRVLLSCSREFGRIPVDGLHEALPAWIAGSPEADDTPYDHSDFSPAVPGEASDAMAAPAR 186 Query: 160 --ALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVE 217 +L+++ DLT RA +G++DPV+GRD EIR + VL RR +NNP+L G+ GVGKTA+VE Sbjct: 187 GSSLEQFCADLTARALKGEIDPVVGRDIEIRTMVDVLLRRRQNNPLLTGDAGVGKTAVVE 246 Query: 218 GLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFI 277 GLA I G+VP L R+L LD+GAL+AGA RGEFE RLK V+ K VILFI Sbjct: 247 GLALAIARGDVPPKLAEVRLLNLDVGALLAGASMRGEFEARLKSVIEAAGKAPVPVILFI 306 Query: 278 DELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVF 337 DE+HT++GAG G DA N+LKPALARG L +GATT EY+++IEKD AL RRFQ + Sbjct: 307 DEIHTLIGAGGQAGTGDAANLLKPALARGTLRVIGATTWAEYKRHIEKDPALTRRFQVLQ 366 Query: 338 VAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEA 397 VAEP + ++RGL + HH V + D A+ A+ LSHRY+ RQLPDKAI L+D A Sbjct: 367 VAEPEPGAAVDMVRGLVGTFSRHHGVVVLDEAVRASVMLSHRYLPSRQLPDKAISLLDTA 426 Query: 398 ASSIRMQIDSKPEELDRLDRRIIQLKLEQQAL--MKESDEASKKRLDMLNEELSDKERQY 455 + + + + P EL L +++ ++E L + + + +++ E Q Sbjct: 427 CARVALSQHAPPRELQYLRQQLEAARIESALLDAERRVGIGDGASWSEVAQRIAELEVQA 486 Query: 456 SELEEEWKAEKASLSGTQTIKAELEQAKI----------------AIEQARRVGDLARMS 499 ++E+ W+A+ ++ +AE E + +A + Sbjct: 487 RDIEQAWQAQVEAVRALLEARAETEGEDERGGEPDGGAGQPCLPADPDTGPAERAVAPAA 546 Query: 500 ELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKL 559 E L+ + L+ +V++A +A +++ WTGIPV RM+ E + Sbjct: 547 AHVDTAAFERLHLLDRQLRQLQGGRPLVFPEVSEAMVAAIISDWTGIPVGRMVTDEIAAV 606 Query: 560 LRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALA 619 R+ + L RV+GQ +A+ ++ I+ +RAGLADP +P+G FL GP+GVGKTE ALA Sbjct: 607 RRLSETLSARVVGQTDALRQIAERIQTARAGLADPAKPLGVFLLTGPSGVGKTETALALA 666 Query: 620 NFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEV 679 ++ ++ ++ I+MSE+ E H+VS L GAPPGYVGY EGG LTEAVRRRPYSV+LLDE+ Sbjct: 667 EALYGGEQNLITINMSEYQEAHTVSSLKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDEI 726 Query: 680 EKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKE 739 EK+H DV + QV D G + DG GR +DFRNT +++TSN+G++L+ + A + Sbjct: 727 EKSHSDVKEMFFQVFDKGYMEDGDGRYIDFRNTTILLTSNVGAELLTSLCADEALAPESD 786 Query: 740 LVLGV----VSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEE-RGYEIH 794 + + F F+ R+ VV F PL + + IA++ L R+ +R+ + G E+ Sbjct: 787 ALRMALGPVLLKAFPAAFLGRVT-VVPFRPLAQGSLVQIARLYLDRVARRMADHHGVELV 845 Query: 795 ISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVN 849 + + GAR + I+Q + L++ L + ++ R+E+ Sbjct: 846 YAPAVADYVVARCLVQETGARLMIGFIEQHLLPALSRHWLDALISNRRLARIEIE 900 >UniRef50_Q54316 Hemolysin B n=25 Tax=cellular organisms RepID=HLYB_TREHY Length = 828 Score = 649 bits (1674), Expect = 0.0, Method: Composition-based stats. Identities = 335/870 (38%), Positives = 503/870 (57%), Gaps = 83/870 (9%) Query: 6 LTNKFQLALAD-AQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDI 64 LT+K + + AQ A ++ + P H++ LL + + +L I+ +L+ ++ Sbjct: 6 LTSKAKKVIELYAQEEAKRLNHDMVTPEHILLGLLYESEALATRVLMRLKIDLDRLKLEL 65 Query: 65 NQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLAD 124 A+ + + G + + + ++++ + A+ N+I +E +L L A Sbjct: 66 ESAMVKSSTTK-VFGTLPTAPRVQKLISRSAEEARALSHNYIGTEHLLLGLLREESGTAY 124 Query: 125 -----------ILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAE 173 IL+ + + S D + + L ++ DLT+ A Sbjct: 125 NVLTSMGLELTILRQEILKMLGVAGSNISSMEQTSQEDNVKKVKTPTLDQFARDLTKMAR 184 Query: 174 QGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLK 233 LD VIGR+ E+ R +Q+L RR KNNP+L+GEPGVGKTAIVEGLA++I+ +VP+ L Sbjct: 185 DKALDRVIGRENEVMRVVQILSRRKKNNPILLGEPGVGKTAIVEGLAEKIVAADVPDILL 244 Query: 234 GRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAM 293 +RVL LD+ ++VAG KYRGEFEER+K ++ ++ K N+I+FIDELHT++GAG A+GA+ Sbjct: 245 KKRVLTLDLSSVVAGTKYRGEFEERIKNIVLEIKKA-SNIIIFIDELHTLIGAGGAEGAL 303 Query: 294 DAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGL 353 DA NMLKPAL+RGE+ C+GATT++EY++YIEKD AL RRFQ + V EPS+EDTI IL G+ Sbjct: 304 DAANMLKPALSRGEIQCIGATTINEYKKYIEKDGALVRRFQPINVEEPSIEDTIEILNGI 363 Query: 354 KERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELD 413 K +YE HH V+ TD AI AAA LS RYI +R LPDKAIDLIDEA S R+ ++P+E Sbjct: 364 KGKYEEHHKVKYTDEAINAAAVLSKRYIFERHLPDKAIDLIDEAGSRARLLNMTRPQEFK 423 Query: 414 RLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQ 473 L+++I +L +++ +++ + + +E++ + + S+ EE+ + E+ + Sbjct: 424 DLEKKIEELNQQKKRVVESQNFEDA---AKIRDEITSLQEELSKKEEKCREEREKIETFI 480 Query: 474 TIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTD 533 E + + R+ + ++ +E++L + + + + + Sbjct: 481 E-----EDDIRHVISEITNIPIKRLLNSESKRLIGMEEELHQKVVGQKEAISSISKAIRR 535 Query: 534 AEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLAD 593 SRAGL Sbjct: 536 -----------------------------------------------------SRAGLKT 542 Query: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGY 653 RP+GSF+FLGPTGVGKT L K L+ FMF +A++RIDMSEFMEK +VSRL+GAPPGY Sbjct: 543 SKRPLGSFIFLGPTGVGKTALAKVLSEFMFGDSDALIRIDMSEFMEKFAVSRLIGAPPGY 602 Query: 654 VGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTV 713 VGYEEGG LTE VRR+PYS+IL DE+EKAHPDV NILLQVL++G+LTD GR VDF NT+ Sbjct: 603 VGYEEGGGLTEKVRRKPYSLILFDEIEKAHPDVTNILLQVLEEGQLTDNFGRKVDFSNTI 662 Query: 714 VIMTSNLGSDLIQERF--------GELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHP 765 +I+TSNLG+ I + E D +K L + NF PEF+NRID+++VFH Sbjct: 663 IIITSNLGARDIVKGSSLGFNAVGSEKDANDIKNFALEELKQNFNPEFLNRIDDIIVFHT 722 Query: 766 LGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQI 825 L ++ + I I LK L + ++ER I++S+EA + + G+D YGAR L+RAIQ++I Sbjct: 723 LSKEDLKDIINIMLKELNEAIKERNIVINLSEEAKNYIIDKGFDKKYGARSLRRAIQKEI 782 Query: 826 ENPLAQQILSGELVPGKVIRLEVNEDRIVA 855 E+ ++ +IL G + G I ++ N+ ++ Sbjct: 783 EDYVSTEILFGNIEDGDTINVDRNDGSLIF 812 >UniRef50_Q7NAZ3 Chaperone protein clpB n=5 Tax=Mollicutes RepID=CLPB_MYCGA Length = 717 Score = 649 bits (1674), Expect = 0.0, Method: Composition-based stats. Identities = 326/706 (46%), Positives = 484/706 (68%), Gaps = 15/706 (2%) Query: 153 GAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGK 212 +++ L KY+ +L + + +DP IGR+EEIRR I++L R+ KNNPVLIGEPGVGK Sbjct: 6 TPTEEKNVLSKYSRNLNDEIARNAIDPTIGREEEIRRLIEILSRKNKNNPVLIGEPGVGK 65 Query: 213 TAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGN 272 TAIVEG A++I+NG+VP+ LK V+ L + +L+AG +++G FEERL +L ++ G Sbjct: 66 TAIVEGFARKIVNGDVPDNLKDVEVVELSLSSLIAGTQFQGSFEERLNKILKEVKNSSGK 125 Query: 273 VILFIDELHTMVGAGK--ADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALE 330 VILFIDE+H +VG GK ++ AMDA N+LKP +ARGE+ +GATT+DEYR+YIEKD ALE Sbjct: 126 VILFIDEIHQLVGMGKNSSNSAMDAANILKPMMARGEIKVIGATTIDEYRKYIEKDGALE 185 Query: 331 RRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKA 390 RR QK+ V EP+ ++ + I+RGL+ER+E H V+I D A+VAA +S RYI+DR LPDKA Sbjct: 186 RRMQKILVDEPTKQEALTIMRGLRERWEAFHKVRIFDDALVAAVEMSARYISDRYLPDKA 245 Query: 391 IDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK----RLDMLNE 446 IDLIDEAA+ I+ I S P ELD + ++II L E AL +E E R++ L + Sbjct: 246 IDLIDEAAAKIKTLIHSLPPELDNIKQKIIHLSTELAALEREKKENHSNVRLGRIEQLKK 305 Query: 447 ELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKI 506 E+ D + +EL +W +K +K E+ IE+ + G+ + S+L Y +I Sbjct: 306 EIKDFTNKQNELTVKWTQQKTIYECINKLKEEVTNLTAEIERLQAKGEYTQASKLLYLEI 365 Query: 507 PELEKQLEAATQLEGK-TMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQE 565 P+ ++++E T+ + T L++ ++ EIAEV+++ T IP+S+++ SE++KLL ++ + Sbjct: 366 PKRQEEIEKKTKELSEFTDNLIKTSISRVEIAEVISQATKIPLSKLVASEQQKLLNLKND 425 Query: 566 LHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDS 625 L + GQ+ A+ VS+A+ R RA + DPNRPIGSFLFLGPTGVGKTE+ K LA +FD+ Sbjct: 426 LSKYIKGQDHAIKNVSDAVLRGRAQINDPNRPIGSFLFLGPTGVGKTEVAKKLAYCLFDN 485 Query: 626 DEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPD 685 ++AMVRIDMSEFME+HSV +L+G+PPGY+GY++ G L++A+R +PY+V+L DE+EKAHPD Sbjct: 486 EKAMVRIDMSEFMERHSVDKLIGSPPGYIGYDQPGVLSDAIRTKPYAVVLFDEIEKAHPD 545 Query: 686 VFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVV 745 V NILLQ+LDDG+LTD R V+F+NT++IMTSN+G++ I + + Sbjct: 546 VLNILLQILDDGQLTDNHNRLVNFKNTIIIMTSNIGAEHILANN--------PAKTIEEL 597 Query: 746 SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSE 805 RPE +NRIDE++ F L ++ +++IAQ L L R++++ I + ++ + + Sbjct: 598 KRKIRPELLNRIDELITFKALNDKDLSAIAQKLLSDLSDRIKKQQINITFDKKIVENVVK 657 Query: 806 NGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNED 851 +G + V+GARPLKR IQ+++EN LA++I+ +L K N + Sbjct: 658 HGSNTVFGARPLKRYIQREVENFLAKKIIENKLEKNKSYVCTFNAE 703 >UniRef50_Q8SQU0 HSP 101 RELATED PROTEIN n=2 Tax=Apansporoblastina RepID=Q8SQU0_ENCCU Length = 851 Score = 647 bits (1669), Expect = 0.0, Method: Composition-based stats. Identities = 333/851 (39%), Positives = 512/851 (60%), Gaps = 25/851 (2%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M + T + Q AL AL ++N IEP HL+ A+L+ + + +L+ + Sbjct: 1 MTTRKYTERAQNALKMCVDEALANNNNTIEPEHLLKAILSDQTSVLHNVLSPT--ERNNV 58 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG 120 + + + + + + + + + L +VL + K ++S VL+ LE Sbjct: 59 KNALIKRIGGFAK-QYNCTEPRVGETLAKVLMAAE---SKGEGEYVSVNALVLSLLEVES 114 Query: 121 TLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPV 180 ++ A + +I + +E+ + + + A+D + ++ +D+ E+A Q DPV Sbjct: 115 -----IRELIANSEDIRKKVEEQTKNKRFDSRNADDGTDVMSRFAVDMVEQARQNVFDPV 169 Query: 181 IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL 240 IGRDEEIRR +++L ++TK+N +L+G+PGVGKTAIV G+AQ I NGE P L+G R+ + Sbjct: 170 IGRDEEIRRVLEILSKKTKSNAILVGKPGVGKTAIVNGIAQLIANGEAP-TLRGARIYNV 228 Query: 241 DMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLK 300 D+G++VAG +RG+FEERLK ++ + G VILFIDE+H ++GAGK DGAMDA NMLK Sbjct: 229 DVGSMVAGTSHRGDFEERLKTLVKEAETTPG-VILFIDEIHIVLGAGKTDGAMDAANMLK 287 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELH 360 P LA G + C+GATT DEYR+YIE D A ERRF +V V EPS+ED+I +LRGLK R E + Sbjct: 288 PGLAAGTIKCIGATTHDEYRKYIENDPAFERRFVQVVVNEPSIEDSITMLRGLKGRLEAY 347 Query: 361 HHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRII 420 H V+I D AIV A S +YI++R+LPD AIDL+D A +S+ + ++S+P+E+ + Sbjct: 348 HGVKIADSAIVYAVNSSKKYISNRRLPDVAIDLLDTACASVMIALESEPQEILNQKSKAW 407 Query: 421 QLKLEQQALM----KESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476 L + + +L ++ DE + K+L + EEL + +EE + +K + + +K Sbjct: 408 GLDIAKTSLEFDLSQKKDEQTLKKLKEVVEELEKVKASLQPMEEAYLRDKKHIIEAKKLK 467 Query: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 536 +LE K+ + QA R + +L+ IP +E +L+ + + + Sbjct: 468 KKLEDTKLRLAQAERDRNTYVAYDLKTNVIPVIESELKRLELESV-------VVILPSHV 520 Query: 537 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNR 596 AE+++RWTGI V R+ E E+L+ M + R+ GQ+ AVDA+ ++I +SR GL D +R Sbjct: 521 AEIISRWTGIDVKRLTIKENERLMEMSSRIKKRIFGQDHAVDAIVDSILQSRVGLDDDDR 580 Query: 597 PIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGY 656 P+GSFL LGPTGVGKTEL KA+A +FD+++ M+ IDMSE+ + +++L+GA GYVGY Sbjct: 581 PVGSFLLLGPTGVGKTELAKAVAMELFDNEKDMLVIDMSEYGNEMGITKLIGANAGYVGY 640 Query: 657 EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 716 +GG LTE ++ RPY+VILLDEV+ AH V N L Q+LD+GR+TDG+G VDFRN VVIM Sbjct: 641 NQGGTLTEPIKGRPYNVILLDEVDLAHQTVLNTLYQLLDEGRVTDGKGAVVDFRNCVVIM 700 Query: 717 TSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQ 776 TSNLG ++I GEL+ K++ V++ P F+NRIDEV+ F+ L +++ I + Sbjct: 701 TSNLGQEIIMRSRGELNDDERKKIEEIVLNRFGAP-FVNRIDEVLYFNNLDRENMHRILE 759 Query: 777 IQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSG 836 Q+ L K+L RG +SD + + +YGAR L+R I+ + L + +L Sbjct: 760 YQMGYLEKKLRGRGITFKVSDAVKEDMVTKVLSSIYGARQLRRFIRSSFKRALTKVLLMR 819 Query: 837 ELVPGKVIRLE 847 + Sbjct: 820 VNEDPIEVSCT 830 >UniRef50_Q98IM7 Probable ClpA/B-type protease n=6 Tax=Rhizobiales RepID=Q98IM7_RHILO Length = 945 Score = 646 bits (1667), Expect = 0.0, Method: Composition-based stats. Identities = 311/928 (33%), Positives = 474/928 (51%), Gaps = 80/928 (8%) Query: 5 RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDI 64 +L A A A N ++E +H + L+ E V ++ AG++ +L D+ Sbjct: 18 KLNPTGLRAFKAAADTAKMRGNPYVELVHFVQQLVLSERSDVQMIVADAGLDVSRLTADM 77 Query: 65 NQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQ-KRGDNFISSELFVLAALESR---- 119 +A+++LP + + S + + LA + G + S +LA L++ Sbjct: 78 TRAIDKLPYGATSVEE--FSDHIFHAIQEGWSLATLEFGVEEVRSAHILLACLKTPALEG 135 Query: 120 ------------GTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTID 167 I + A T ++ + AL KY D Sbjct: 136 LVSKISAEFDKIDADGVIARFADVTEGSLEAGSPPAAAAAETPMKRGLGGDSALAKYATD 195 Query: 168 LTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGE 227 LT+RA GK+DPVIGRD EIR+ + +L RR +NNP+L GE GVGKTA+VEG A RI G+ Sbjct: 196 LTQRARDGKIDPVIGRDPEIRQIVDILMRRRQNNPILTGEAGVGKTAVVEGFALRIAQGD 255 Query: 228 VPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAG 287 VP L+ V LD+G + AGA +GEFE+RLK V++++ E +ILFIDE HT++GAG Sbjct: 256 VPPTLQNVSVRMLDVGLMQAGASVKGEFEKRLKAVIDEVQASETPIILFIDEAHTLIGAG 315 Query: 288 KADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTI 347 A G DA N+LKPALARGEL + ATT EY+Q+IEKD AL RRFQ V + EPS + Sbjct: 316 GAAGTGDAANLLKPALARGELRTIAATTWAEYKQHIEKDPALTRRFQVVKIEEPSETVAV 375 Query: 348 AILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDS 407 +LRG+ E HH VQI D AI A+ +LSHRYI RQLPDKA+ L+D A + + + + Sbjct: 376 LMLRGVAGVLEQHHKVQILDEAIEASVSLSHRYIPARQLPDKAVSLLDTACARVAVSQHA 435 Query: 408 KPEELDRLDRRIIQLKLEQQAL--MKESDEASKKRLDMLNEELSDKERQYSELEEEWKAE 465 P E++ + RR L++E+ + R + L++ E + + W E Sbjct: 436 TPAEVEDILRRRQALEVEEGIIGREAAIGIEVVDRQARVEAGLAETETTLAAAQARWDRE 495 Query: 466 KASLSGTQTIKAEL----------------------------------EQAKIAIEQARR 491 KA ++ ++A+L E E A Sbjct: 496 KALVAEILDLRAKLRGEGVPLDAVEGGEAAPGEAVDAPAATSHERKAPEAKTPKPETAEP 555 Query: 492 VGDLARMSELQYGKIPELE-----------------KQLEAATQLEGKTMRLLRNKVTDA 534 G ++ ++ + K+ + ++L A L+ V Sbjct: 556 KGSKSKSAKTKAAKMEAVAAHEPVPVPDSAADLARLRELMAELAEAQGETPLILPSVDRN 615 Query: 535 EIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADP 594 +A V+ WTGIP RM+ S+ EK L++ L RV+GQ+ A++ ++ ++ SRAGL P Sbjct: 616 AVAAVVQDWTGIPTGRMLSSQTEKALKLAATLAERVVGQDHAMEMIARRVQTSRAGLGAP 675 Query: 595 NRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYV 654 +P+G FL GP+GVGKTE ALA ++ ++ ++ I+MSEF E H+VS L GAPPGYV Sbjct: 676 EKPVGVFLLCGPSGVGKTETALALAETLYGGEQNLISINMSEFQEAHTVSTLKGAPPGYV 735 Query: 655 GYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVV 714 GY +GG LTEAVRR+PYSVILLDEVEKAHPDV I QV D G + D +GR +DF+NT++ Sbjct: 736 GYGKGGILTEAVRRKPYSVILLDEVEKAHPDVHEIFFQVFDKGMMDDSEGRRIDFKNTLI 795 Query: 715 IMTSNLGSDLIQERFGELDYAHMKELVLGVVS----HNFRPEFINRIDEVVVFHPLGEQH 770 ++TSN+GS++I +R + + + F F+ R+ + ++PL + Sbjct: 796 LLTSNVGSEVIMDRTKNGTLRTGMDDLDTALRGPLLKVFPAAFLGRV-VTIPYYPLSDAM 854 Query: 771 IASIAQIQLKRLYKRLEE-RGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPL 829 I +I + Q ++ +RL+ E+ I D + ++ + G R + + + L Sbjct: 855 IEAITRHQFGKIARRLKATNDAELVIGDGVMDMVKARCTEIESGGRMIDAILTNTLLPEL 914 Query: 830 AQQILSGEL--VPGKVIRLEVNEDRIVA 855 ++ +L+ L + + + + Sbjct: 915 SRGVLNRSLEGKKMTKVTVGASSEGFTY 942 >UniRef50_B5ZBN7 Chaperone protein ClpB n=44 Tax=cellular organisms RepID=B5ZBN7_UREU1 Length = 704 Score = 645 bits (1664), Expect = 0.0, Method: Composition-based stats. Identities = 329/700 (47%), Positives = 480/700 (68%), Gaps = 11/700 (1%) Query: 153 GAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGK 212 ++ L+++ +L + K+DP+IGRDEEIRRTI++L R+TKNNPVLIGEPGVGK Sbjct: 4 KQKNTSNPLEEFGRNLNQEILDNKIDPIIGRDEEIRRTIEILSRKTKNNPVLIGEPGVGK 63 Query: 213 TAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGN 272 TAIVEGLA RI++ +VP L + ++ L + +L+AGA Y+G+FEER+ +L ++ K GN Sbjct: 64 TAIVEGLAYRIVHKDVPSNLLDKTIIELSLSSLIAGASYQGQFEERINAILKEVKKSNGN 123 Query: 273 VILFIDELHTMVGAGKADGA-MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALER 331 +ILFIDE+H +VG G+ G+ MD N+LKP +ARGE+ +GATTLDEYR YIEKD ALER Sbjct: 124 IILFIDEIHQIVGMGRNQGSNMDVANILKPMMARGEIKLIGATTLDEYRLYIEKDQALER 183 Query: 332 RFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAI 391 RF KV V +P++++T+ I+RGLK R+E H ++I D A++AA LS RYI DR LPDKAI Sbjct: 184 RFTKVLVNKPTIQETLTIMRGLKPRWEAFHGIKIHDNALIAAVNLSERYINDRNLPDKAI 243 Query: 392 DLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDK 451 DLIDEAA+ I+ QI+S+P LD + R + L+ E+ AL E DE S KRL+ + E++ K Sbjct: 244 DLIDEAAAKIKTQINSQPIYLDEIKRDLQHLQTEKAALESEKDEKSIKRLNDILEKIKLK 303 Query: 452 ERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEK 511 + +++ L + + EK + + ++ ++E+ + IE + G + S L Y +P LEK Sbjct: 304 QDEFNNLNDIYLKEKKQIDDLKNLRQKIERIQHDIEFYQSEGKYEKASRLLYSDLPALEK 363 Query: 512 QLEAATQL--EGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHR 569 Q E + +++ + +T+ EIA+V+AR TGIP++ ++ E+ KLL + + + Sbjct: 364 QRGELENKINENSSQKMIVDSLTENEIADVIARATGIPLNHLLADEKTKLLSLNKRIAAH 423 Query: 570 VIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAM 629 VIGQ+EAV +S+A+ R RAG+ +PN+PIGSFLFLGPTGVGKTEL K LA +FDS +A+ Sbjct: 424 VIGQDEAVKLISDAVIRGRAGINNPNQPIGSFLFLGPTGVGKTELAKTLAKELFDSQKAL 483 Query: 630 VRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNI 689 +R DMSE+MEKHSVS+LVGAPPGYVGYE G LTE+V+R+PYS++L DE+EKAHPDV NI Sbjct: 484 IRFDMSEYMEKHSVSKLVGAPPGYVGYENAGLLTESVKRKPYSILLFDEIEKAHPDVLNI 543 Query: 690 LLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNF 749 LLQ+LD+G + D + ++F+NT++IMTSN+G++ + E K L + F Sbjct: 544 LLQILDEGSVKDAKNNEINFKNTIIIMTSNVGAEALLENN--------KTNALMELQKTF 595 Query: 750 RPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYD 809 +PE +NRI E++ F+ L ++ I I++ LK L L ++ Y I +D K++ + Y Sbjct: 596 KPEILNRISEIIFFNKLSKEVIFKISENLLKELSDLLAKQDYSIKFNDNIAKIMVDEAYS 655 Query: 810 PVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVN 849 YGARPLKR I + +EN +A+ I+ + + + + Sbjct: 656 SNYGARPLKRWITKHLENEIAKLIIENRITKNRNYEINYD 695 >UniRef50_Q8EW28 Chaperone protein clpB n=2 Tax=Bacteria RepID=CLPB_MYCPE Length = 705 Score = 644 bits (1660), Expect = 0.0, Method: Composition-based stats. Identities = 322/708 (45%), Positives = 493/708 (69%), Gaps = 13/708 (1%) Query: 153 GAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGK 212 +++ LKKY+ +L E KL+ +IGR++EIRR I++L R+ KNNPVLIGEPGVGK Sbjct: 6 EPSNEKDILKKYSRNLNEEVSANKLNKIIGREQEIRRVIEILSRKEKNNPVLIGEPGVGK 65 Query: 213 TAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGN 272 TAIVEG Q+II+ EVPE L V +++ +L+AG +GEFE+RL ++ + + G Sbjct: 66 TAIVEGFVQKIISKEVPENLVHCVVYEVNLSSLIAGTFLQGEFEKRLNALIKEAKQNNGA 125 Query: 273 VILFIDELHTMVGAGKA--DGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALE 330 VILFIDE+H ++G GKA + MDA N+LKP +ARGE+ +GATT +EYRQYIEKD ALE Sbjct: 126 VILFIDEIHQLMGMGKAGNNSGMDAANILKPIMARGEIKIIGATTSNEYRQYIEKDGALE 185 Query: 331 RRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKA 390 RRFQK+ V EP+ E+ + I+RGLKE++E++H V+I D A+VA+ LS RYI+D+ LPDKA Sbjct: 186 RRFQKILVEEPTPEEALTIMRGLKEKWEIYHKVRIQDNALVASVKLSERYISDKYLPDKA 245 Query: 391 IDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSD 450 IDLIDEAA+ I+ + + P E ++++I L+ E+ AL KE K+R++ + EL Sbjct: 246 IDLIDEAAAKIKTEAHTSPSEP--INKKIFYLETEKIALSKEEGTNQKERINEIEIELEK 303 Query: 451 KERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELE 510 +++ +E+EWK +K IK E+E+ +E+ + G+ S++ Y +PEL+ Sbjct: 304 LKQERDLVEKEWKEQKEQQVALNKIKKEIEKNNWDVERYQNQGEYTEASKILYSVLPELK 363 Query: 511 KQLEAATQLEGKTMR-LLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHR 569 K+LEA + + + L+++ +++ ++AE+++R T IP++++ E E++KLL + L R Sbjct: 364 KKLEAIEKSISENKKVLIKDYISEIDVAEIISRITKIPLNKIFEKEQDKLLNLFNNLKKR 423 Query: 570 VIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAM 629 V GQ+EA+ VS+ + ++R G+ +PNRPIGSFLF+GPTGVGKTE+ K+LA +F++++A+ Sbjct: 424 VKGQDEALKLVSDTVLKNRVGINNPNRPIGSFLFVGPTGVGKTEVAKSLAENLFNTEKAI 483 Query: 630 VRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNI 689 VRI+MSE+MEKHS+SRL+GAPPGY+GYE+ G L+E +RR+PYSV+LLDE+EKAHPD+ N+ Sbjct: 484 VRINMSEYMEKHSISRLIGAPPGYIGYEQAGELSEQIRRKPYSVVLLDEIEKAHPDILNV 543 Query: 690 LLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNF 749 LLQVLD+G L D QGR ++F+NT++IMTSN+G+ + E +++ + +F Sbjct: 544 LLQVLDEGTLKDNQGRNINFKNTIIIMTSNVGALYLMENK--------EDMFERELKTSF 595 Query: 750 RPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYD 809 +PEF+NRIDE++ F+ + + IAQ L L KRL++ Y+I ++ +++NGY Sbjct: 596 KPEFLNRIDEIIKFNSITMEFAKEIAQKMLDDLEKRLKDNNYQITFDKSVVEYVAKNGYS 655 Query: 810 PVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857 YGARP+ R IQ+ IEN + + IL EL+ + + +++ ++ Sbjct: 656 KEYGARPINRFIQKTIENFITESILKNELIKDRSTIINFANNKLAILK 703 >UniRef50_A7ZQR5 ClpA/ClpB family protein n=21 Tax=Proteobacteria RepID=A7ZQR5_ECO24 Length = 881 Score = 643 bits (1659), Expect = 0.0, Method: Composition-based stats. Identities = 334/892 (37%), Positives = 486/892 (54%), Gaps = 73/892 (8%) Query: 5 RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDI 64 RL AL A SL + I H + LL Q G ++ + + L + Sbjct: 12 RLNPYCARALDAAASLCQTRAHAEITIEHWLLKLLEQGEGDITVIARRYEWDIDTLWQSL 71 Query: 65 NQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDN-FISSELFVLAALESRGTLA 123 L+ LP+ Q S+ L ++ +A GD+ I S+ ++A E A Sbjct: 72 LAHLDTLPR--SVRERPQLSEPLTALIRQAWLIASLEGDDPQIRSQHLLMALTEKPMLPA 129 Query: 124 -----DILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQA------------------ 160 +L + + ++ + + Sbjct: 130 CNDLWVLLSLSRVQFERLRPLLDAQSDECPARQPQVTEPLTSAQPGVATTDAPANTLTGK 189 Query: 161 --------LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGK 212 L ++T D+TE+A G++DPV GRD EIR+ + +L RR KNNP+L+GEPGVGK Sbjct: 190 QDDALLAVLNRFTEDVTEKARSGRIDPVFGRDTEIRQMVDILSRRRKNNPILVGEPGVGK 249 Query: 213 TAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGN 272 TA+VEGLA RI G VP+ LK + LD+G L AGA +GEFE+RLK V++ + K Sbjct: 250 TALVEGLALRIAEGNVPDSLKTVHIRTLDLGLLQAGAGVKGEFEQRLKNVIDAVQKSPEP 309 Query: 273 VILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERR 332 V+LFIDE HT++GAG G DA N+LKPALARGEL + ATT EY+QY E+DAALERR Sbjct: 310 VLLFIDEAHTIIGAGNQAGGADAANLLKPALARGELRTIAATTWSEYKQYFERDAALERR 369 Query: 333 FQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAID 392 FQ V V EP + +LRGLK RY HH V + D AI A LS RY+ RQLPDKA+D Sbjct: 370 FQMVKVDEPDDDTACLMLRGLKARYAQHHGVHMLDSAIQTAVRLSRRYLTGRQLPDKAVD 429 Query: 393 LIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKES---DEASKKRLDMLNEELS 449 L+D A + +RM +D+ PE L +L R+ L +E++A+ ++S EAS +RL L + Sbjct: 430 LLDTAGARVRMSLDTLPEPLTQLHARLAALDIEREAIEQDSVFYPEASPERLAELIDLRD 489 Query: 450 DKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPEL 509 + + + LE +++ EK T++ E + Sbjct: 490 ELQAEAGHLETQYQQEKRLAQQIMTLRQEGTDST-------------------------- 523 Query: 510 EKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHR 569 +L+ + LL V +A V+A WTGIP+S ++ E+ LL MEQ L +R Sbjct: 524 --ELQQQLRTHQGFAPLLALDVDARAVATVVADWTGIPLSSLLRDEQSDLLSMEQSLENR 581 Query: 570 VIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAM 629 V+GQ+ A+ A++ +R ++ GL N P G FL GP+G GKTE LA+ +F ++++ Sbjct: 582 VVGQSPALCAIAQRLRAAKTGLTPENGPQGVFLLTGPSGTGKTETALTLADTLFGGEKSL 641 Query: 630 VRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNI 689 + I++SE+ E H+VS+L GAPPGYVGY +GG LTEAVR+RPYSV+LLDEVEKAH DV N+ Sbjct: 642 ITINLSEYQEPHTVSQLKGAPPGYVGYGQGGVLTEAVRKRPYSVVLLDEVEKAHRDVMNL 701 Query: 690 LLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQ---ERFGELDYAHMKELVLGVVS 746 QV D G + DG+GR +DFRNTV++MT+NLGSD I E + A + EL+ ++ Sbjct: 702 FYQVFDRGFMRDGEGREIDFRNTVILMTANLGSDHIMQLLEEKPDATDADLHELLYPLLR 761 Query: 747 HNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEER-GYEIHISDEALKLLSE 805 +F+P + R V+ + PLG++ + +I +++L ++ +RL + G E I+D L+ Sbjct: 762 EHFQPALMARFQTVI-YRPLGQEAMRAIVEMKLAQVVRRLRQHYGLETEINDSLYDALTA 820 Query: 806 NGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEV---NEDRIV 854 P GAR + + QQI L+QQ+L+ + K +L + ED IV Sbjct: 821 ACLLPDTGARNIDSLLNQQILPVLSQQLLAQQAAHRKPAQLRLGWDEEDGIV 872 >UniRef50_C7RFB8 ATPase AAA-2 domain protein n=5 Tax=Clostridiales Family XI. Incertae Sedis RepID=C7RFB8_ANAPD Length = 814 Score = 642 bits (1656), Expect = 0.0, Method: Composition-based stats. Identities = 324/860 (37%), Positives = 494/860 (57%), Gaps = 80/860 (9%) Query: 7 TNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQ 66 N+ + A+ + ++ +I HL+ AL+ + L +G N R+ + Sbjct: 3 NNRLNRLTSQARRESYSLNHDYIGSEHLLLALMKTG-SLANKALEKSGANYDLFRSIVIN 61 Query: 67 ALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADIL 126 + R S+ + + ++A R + ++ E + A + + +++ Sbjct: 62 NIGRGNSQRPATE---FSKKVRMIFEKSREIAMARKSSVVNEEDILQALINDDDSFTNLM 118 Query: 127 KAA-GATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDE 185 G I + ++ M + + + KYT DL E AE GK+DPVIGRD Sbjct: 119 FLLSGLDKKVIGKNLDDMLKEVYKTKGSSSKFSENVTKYTNDLNELAESGKIDPVIGRDT 178 Query: 186 EIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGAL 245 EI R +Q+L RR KNNP+LIG PGVGKTAI EGLAQRI+ +VP+ +K +R+L+LD+ ++ Sbjct: 179 EIERLVQILMRRRKNNPILIGAPGVGKTAIAEGLAQRIVAKDVPKIIKDKRILSLDLASM 238 Query: 246 VAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALAR 305 +AG+KYRG+FE+RLK + ++ K++ +VILFIDE H ++GAG ++G+MDA N+LKP LA+ Sbjct: 239 IAGSKYRGDFEDRLKKLFEEIGKRD-DVILFIDEFHMVLGAGASEGSMDAANILKPILAK 297 Query: 306 GELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQI 365 GE+ +GATT++EYR+++EKD+AL RR Q + V EPS+ED I++GLK++YE HH V+I Sbjct: 298 GEIQIMGATTIEEYRKHVEKDSALSRRMQPIQVDEPSLEDARKIIQGLKDKYEDHHGVEI 357 Query: 366 TDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLE 425 TD AI AA LS RYI+DR LPDKAIDLIDEA+S IR+ K ++ + ++ +L E Sbjct: 358 TDEAIEAAVDLSDRYISDRYLPDKAIDLIDEASSKIRIAAFQKEDDSAPSEDKLEKLNKE 417 Query: 426 QQALMKESD-EASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKI 484 ++ +++ D E + + D +N+ D E + + +E S ++ A + Sbjct: 418 KEQAVRDQDFERAAELRDKINQAKFDLEIEKEKEKENKDRLFISYDDIASVVANWSKV-- 475 Query: 485 AIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWT 544 + +++E + K L++ L+ + + + + + A Sbjct: 476 ---------PVEKLTEDEMEKYANLDEDLKLSVIGQKDAIDSVARSIKRAR--------- 517 Query: 545 GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFL 604 +G + + + I F+ Sbjct: 518 --------------------------VGLKDPKKPIGSFI------------------FV 533 Query: 605 GPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTE 664 GPTGVGKT L K LA +F S++ ++R+DMSE+MEK +VSRLVG+PPGYVGYEEGG LTE Sbjct: 534 GPTGVGKTYLAKTLAQNLFGSEDKLIRMDMSEYMEKFAVSRLVGSPPGYVGYEEGGQLTE 593 Query: 665 AVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDL 724 AVR PYSVIL DE+EKAHPDVFN+LLQ+LDDGRLTDGQGRTVDF+NT++IMTSN+G Sbjct: 594 AVRTNPYSVILFDEIEKAHPDVFNLLLQILDDGRLTDGQGRTVDFKNTIIIMTSNIGVRS 653 Query: 725 IQERF---------GELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIA 775 + E + E++ + +F PEF+NR+D+V++F PLGE I I+ Sbjct: 654 LSTSKSIGFELGDQKEAEEERTSEIIEKAIKDSFAPEFLNRLDQVIMFKPLGEAEIGEIS 713 Query: 776 QIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILS 835 + L++ +RL E +I + +KLL++ G+DP YGARPL+R I + I++ LA+ IL Sbjct: 714 GLMLEKTRQRLNEIDLDIVYDQKVVKLLAKEGFDPEYGARPLERHITKMIDDRLAEDILD 773 Query: 836 GELVPGKVIRLEVNEDRIVA 855 G+L + IR+ V +D +V Sbjct: 774 GKLKRDETIRISVRKDSLVF 793 Score = 43.6 bits (101), Expect = 0.036, Method: Composition-based stats. Identities = 12/108 (11%), Positives = 49/108 (45%), Gaps = 2/108 (1%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 + K ++ ++ +A+ + + ++ AL+N + + + +G++ + +++ Sbjct: 75 FSKKVRMIFEKSREIAMARKSSVVNEEDILQALINDDDSFTNLMFLLSGLDKKVIGKNLD 134 Query: 66 QALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVL 113 L + + +G+ + S+++ + N ++LA+ + + + Sbjct: 135 DMLKEVYKTKGSSS--KFSENVTKYTNDLNELAESGKIDPVIGRDTEI 180 >UniRef50_A4E9C6 Putative uncharacterized protein n=3 Tax=Collinsella RepID=A4E9C6_9ACTN Length = 880 Score = 641 bits (1654), Expect = 0.0, Method: Composition-based stats. Identities = 314/890 (35%), Positives = 482/890 (54%), Gaps = 98/890 (11%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 LDR T++ + ++ A+ AL + + HL+ AL ++ G + L S I+ + Sbjct: 1 MLDRFTDRARKVMSMAKQEALDLHSNKVGTEHLLLALAKEDEGIAAEALRSLDISYDDIM 60 Query: 62 TDINQALNRLPQVEGTGG--DVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES- 118 + + +P+ + + ++ V+ ++A++ ++S+E ++ +E Sbjct: 61 DTLKEVQTTVPEPSEETEAAKLAFTPLVISVMERSFRVARENNQTYVSTEHLLIGIVEEG 120 Query: 119 RGTLADILKAAGATTANITQAIEQ------------------------MRGGESVNDQGA 154 G DIL G ++A+I +AIE+ S Q Sbjct: 121 NGMAMDILMRLGVSSASIKKAIEKLTAKDQDKKRPLAGAGAGRPGAGLPFFSGSDASQQK 180 Query: 155 EDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214 + LK++ +LT++A G+LDPVIGR++E++R +++L RRTKNNP+++G+PGVGKTA Sbjct: 181 GSGTETLKQFATNLTQKARDGELDPVIGREKEVQRMMEILSRRTKNNPLILGDPGVGKTA 240 Query: 215 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 274 IVEGLAQ+I G VPE L + + LD+ LVAGAKYRGEFEERLK V+ + + + +VI Sbjct: 241 IVEGLAQQIAAGNVPENLMNQNIWTLDLPGLVAGAKYRGEFEERLKNVIQEATEAD-DVI 299 Query: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334 LFIDE+HT++GAG A+G++DA +MLKP LARG +GATT +E+R+Y+ KD A ERRFQ Sbjct: 300 LFIDEMHTIIGAGSAEGSIDASSMLKPVLARGAFQIIGATTAEEFRKYLTKDPAFERRFQ 359 Query: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394 + V EPSVEDT+ IL LK RYE HHHV+ T AI AAA LS+RYI DR LPDKAIDLI Sbjct: 360 TIDVEEPSVEDTVKILTALKPRYEEHHHVRYTQGAIEAAANLSNRYIQDRFLPDKAIDLI 419 Query: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQ 454 DEA + R+ + PE + + R+ + + A + ++ + + E+ E + Sbjct: 420 DEAGARARIAANRAPEPVREAEHRV---EELKAAAQEATESDDMNKAAEITEQQKAAEIE 476 Query: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLE 514 +E + W AE + T + + I ++ ++E + ++ + E L+ Sbjct: 477 LAEAKAAWTAELDASPLTIDVSQIAD-----IVSVTSGVPVSSLTESESRRLLQAESVLK 531 Query: 515 AATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574 + + + + V + R G + + K + + L + G Sbjct: 532 TRIIGQDEAVEAVAKAVRRSRSPLKDPRRPGGSFIFLGPTGTGK-TELAKTLAEYLFGSK 590 Query: 575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 634 +A ++ DM Sbjct: 591 DA----------------------------------------------------LISFDM 598 Query: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694 SEF + VS+L+G+PPGYVG++EGG LT+AVRR PYSV+L DE+EKAHPD+FNILLQVL Sbjct: 599 SEFGSEFEVSKLIGSPPGYVGHDEGGQLTKAVRRHPYSVVLFDEIEKAHPDIFNILLQVL 658 Query: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERF---------GELDYAHMKELVLGVV 745 ++GRLTD QG+TVDFRNTV+IMTSN+G+ I + L + +K +G + Sbjct: 659 EEGRLTDSQGKTVDFRNTVIIMTSNVGAREIAQDASVGFGTTGEQGLTSSEIKGRAMGEL 718 Query: 746 SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSE 805 FRPE +NRID++VVF L +++ IA + + L +RL G I ++D A + Sbjct: 719 KRLFRPELLNRIDDIVVFQKLSGENLTKIAHLLVDDLRQRLIANGMNIKLTDAAYDKIVA 778 Query: 806 NGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855 G D GARPL+RAIQ+ IE+PL++++L+GE G + +V + + V Sbjct: 779 EGTDLTNGARPLRRAIQKLIEDPLSEELLAGEWGEGDTVLCDVADGKFVF 828 >UniRef50_D2TPV1 T6SS protein Cts2V n=1 Tax=Citrobacter rodentium ICC168 RepID=D2TPV1_CITRO Length = 835 Score = 641 bits (1652), Expect = 0.0, Method: Composition-based stats. Identities = 305/831 (36%), Positives = 453/831 (54%), Gaps = 26/831 (3%) Query: 5 RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDI 64 RL AL A + + F+EP HL+ ALL+ E ++ L AGI LR +I Sbjct: 9 RLNPVCLYALEQAAGRSRAQGHWFVEPEHLLLALLDDEHCDLACCLDGAGIPVDALRDEI 68 Query: 65 NQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLAD 124 +A ++ G S LV +L L R + S L +L L A Sbjct: 69 RRAQSQFRT--GCTRMPVFSAQLVELLEGALLLTTFRQLKQVRSALLLLTLLTRDRLRAQ 126 Query: 125 ILKAAGATTANITQAIEQM----------RGGESVNDQGAEDQRQALKKYTIDLTERAEQ 174 + + + +E + + A L +YT DLT A Q Sbjct: 127 LAQGLPLLLKISAEQLEDHWLNWCRGSAEAVSDRSDADAAVRGDSVLDQYTHDLTREARQ 186 Query: 175 GKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKG 234 G++DP+IGRD EIR+ I +L RR +NNP+L+G PGVGKTA+ EGLA RI G VP L+ Sbjct: 187 GRIDPIIGRDAEIRQCIDILLRRRQNNPILVGAPGVGKTAVAEGLALRIAEGSVPPPLRD 246 Query: 235 RRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMD 294 +L+LD+G L AGA +GEFE+RLKGV+ + K ++LFIDE HT++GAG A+G D Sbjct: 247 VALLSLDLGLLQAGAGVKGEFEQRLKGVIEAVKKSSQPIVLFIDEAHTLIGAGGAEGGSD 306 Query: 295 AGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLK 354 A N+LKPALARGEL + ATT EY++Y EKD AL+RRFQ++ + EP + + +LR + Sbjct: 307 AANLLKPALARGELRTIAATTWQEYKKYFEKDPALDRRFQRIHIEEPDEDSAVMMLRAVA 366 Query: 355 ERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDR 414 ++ E HH VQI D AI A LS RYI+ RQLPDKAI ++D A S + + P L+ Sbjct: 367 DKLEAHHGVQILDTAIREAVRLSQRYISGRQLPDKAISVLDTACSRVALAQHDIPPALEE 426 Query: 415 LDRRIIQLKLEQQAL--MKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGT 472 + +++ ++ E L RL L + + Q E+EE W+ E+ + Sbjct: 427 VRQQLATIEEESVRLNRELLVGIDHHDRLCDLEAQAKLLQLQAQEVEERWQDERQRVGEL 486 Query: 473 QTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVT 532 + + ++ + + + L +LE A + L+ + V Sbjct: 487 LAARQRMLALNARLDDEEELE-------QELVECAALIGKLETAAVQLRDEVPLVPDCVD 539 Query: 533 DAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLA 592 A +A V+ WTGIP+ +M+ E L + + + RV+GQ A++ ++ +R R+GL Sbjct: 540 AATVAAVIGGWTGIPIGQMLTDEAHALRTLVERMSERVMGQRAALETIARRLRAYRSGLT 599 Query: 593 DPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPG 652 DP +P+G FL +GPTGVGKTE ALA+ ++ + ++ I++SE+ E H+VS+L GAPPG Sbjct: 600 DPQKPVGVFLLVGPTGVGKTETAYALADALYGGERNLITINLSEYQEAHTVSQLKGAPPG 659 Query: 653 YVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNT 712 YVGY GG LTEAVRRRPYSV+LLDE+EKAHPDV V D G + DG G VDF+NT Sbjct: 660 YVGYGSGGALTEAVRRRPYSVVLLDEIEKAHPDVLEAFYNVFDKGVMEDGTGLIVDFKNT 719 Query: 713 VVIMTSNLGSDLIQER-FGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHI 771 V++ TSN+G++LI E E + + + +FRP F+ R+ V + L E+ + Sbjct: 720 VMLATSNVGAELILETPTSEFNSEWFNTAMREELLRHFRPAFLARMT-TVAYRALDEETL 778 Query: 772 ASIAQIQLKRLYKR-LEERGYEIHISDEALKLLSENGYDPVYGARPLKRAI 821 I +L++L +R L G ++++ D ++ + + GAR ++ + Sbjct: 779 KGIVLAKLEKLAQRYLVATGEKLNMEDGLVERVMDQC--KGVGARDIENLV 827 >UniRef50_Q7N4N8 Similar to ClpA/B-type chaperone n=3 Tax=Enterobacteriaceae RepID=Q7N4N8_PHOLL Length = 860 Score = 640 bits (1650), Expect = 0.0, Method: Composition-based stats. Identities = 296/868 (34%), Positives = 477/868 (54%), Gaps = 51/868 (5%) Query: 4 DRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTD 63 +LT + + L +A +LA+ + +E HL+ AL ++ ++ + GI++ L Sbjct: 10 SKLTVEARQCLDEAVNLAVRRTHHEVEIEHLLLALFEKQLPTMEQVCHHGGIDSMTLLNA 69 Query: 64 INQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQ-KRGDNFISSELFVLAALESRGTL 122 ++L L + +L + A G + I++++ ++A + + Sbjct: 70 CQRSLALLRSGNHRP--PVLATNLTEWMEQTWMYASTHWGASQITAQVLIVALIMNPSLH 127 Query: 123 ADILKAAGATTANITQAIEQ------MRGGESVNDQGAEDQRQALKKYTIDLTERAEQGK 176 + T IE + + ++ + AL +YT LT+ A K Sbjct: 128 HSLTSELQQALQGNTDGIEPWLRTQTNTTPQHITAPVGDNTQSALAQYTHHLTQAARDNK 187 Query: 177 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRR 236 LDPV+GR+ EIR+ I VL RR +NNP+L GE GVGKTA++EGLAQRI++G VP+ L Sbjct: 188 LDPVLGREREIRQLIDVLLRRRQNNPLLTGEAGVGKTALIEGLAQRIVDGRVPKVLAQAE 247 Query: 237 VLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAG 296 + LDMG L AGA +GEFE RL+ +L+++ K VILFIDE HT++GAG G DA Sbjct: 248 LFTLDMGLLQAGASVKGEFESRLQKLLDEVKKYPTPVILFIDEAHTLIGAGGQAGQNDAA 307 Query: 297 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 356 N+LKPALARGEL + ATT EY++Y EKDAAL RRFQ + V EPS+E IA+LR + Sbjct: 308 NLLKPALARGELRAIAATTWSEYKKYFEKDAALARRFQLIKVEEPSLELAIAMLRAITPA 367 Query: 357 YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 416 E HH+V++ A+ A TL++RYI RQLPDK++ L+D A + + + +P ++ L Sbjct: 368 MEKHHNVKVLAEAVTEAVTLANRYITGRQLPDKSVSLLDSACARVAVSQTDEPAPIEDLR 427 Query: 417 RRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476 + + EQ+AL++ + + +L L + + + +E+ E+ A++ ++ Sbjct: 428 AMLANIAAEQEALLR--EGGHETQLQKLAQRQAKLQASLAEILPEYHAQRQLVNDILACD 485 Query: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 536 E ++P L +L + + V A + Sbjct: 486 EHDE------------------------RLPVLRAELHQRHHQHA----YVFDCVDAACV 517 Query: 537 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNR 596 A+++A WTGIP+ RM+E+ER+ L ++E L RV+GQ+ A+ ++ IR ++ LADP + Sbjct: 518 ADIVAGWTGIPLGRMVENERDVLRQLETRLGQRVMGQDHALSQIARQIRIAKVQLADPIK 577 Query: 597 PIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGY 656 P G F+ GP+GVGKTE ALA+ ++ + ++ I+MSE+ E HSVS L G+PPGYVGY Sbjct: 578 PTGVFMLAGPSGVGKTETALALAHELYGGEHHLITINMSEYQEAHSVSGLKGSPPGYVGY 637 Query: 657 EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 716 +GG LTEAVRR+PYSV+LLDEVEKAHPDV + QV D G + D +G+ ++FRNT++I+ Sbjct: 638 GQGGVLTEAVRRQPYSVVLLDEVEKAHPDVLELFFQVFDKGMMEDAEGQQINFRNTLIIL 697 Query: 717 TSNLGSDLIQERFGE----------LDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPL 766 T+N SDL+ ++E++ + F P F+ R+ +V+ + P+ Sbjct: 698 TTNAASDLVMRAAMHGVKEQGENRPATLEDIQEIIRPELQRIFTPAFLGRL-QVIPYLPV 756 Query: 767 GEQHIASIAQIQLKRLYKRLEER-GYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQI 825 + + +I +L ++ R + E+H SD + +++ GAR + + Q + Sbjct: 757 QGEVLHAIVHHKLNKIVTRYRQSTQCELHYSDTLVDFIAKGCQIAESGAREIDNLLTQFV 816 Query: 826 ENPLAQQILSGELVPGKVIRLEVNEDRI 853 L+ Q+L G + + + ++V + +I Sbjct: 817 LPLLSDQLLLGGVPVNQDVWMDVIDGQI 844 >UniRef50_A9BLL0 Type VI secretion ATPase, ClpV1 family n=46 Tax=Bacteria RepID=A9BLL0_DELAS Length = 928 Score = 639 bits (1648), Expect = 0.0, Method: Composition-based stats. Identities = 325/897 (36%), Positives = 476/897 (53%), Gaps = 49/897 (5%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +L +L A N ++E +H + LL + + +L I + +L Sbjct: 25 FGKLNPLLFKSLEGATVFCKLRGNPYVELVHWLHQLLQENDCDLIRILRHFDIASDRLAA 84 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKR-GDNFISSELFVLAALESRGT 121 D+ + L++LP+ + D S+ + + A D+ I S + + +R Sbjct: 85 DVLRRLDQLPRGATSISD--FSEHIETAIERGWVYATLMFNDSQIRSAYLLSGMVRTRSL 142 Query: 122 LADILKAAGATTANITQAI-------------------------EQMRGGESVNDQGAED 156 A+ L++ I++ E G S A Sbjct: 143 -ANELRSISREFDKISEPALSDAFARLLPDSPEARMRAADGSGLEGTPGEASQATGAAPG 201 Query: 157 QRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIV 216 Q AL++YT+DLT RA+ G+LDPV GRD+E+R+ + +L RR +NNP+L+GE GVGKTA+V Sbjct: 202 QGGALQQYTVDLTARAKAGELDPVTGRDDEVRQMVDILLRRRQNNPILVGEAGVGKTAVV 261 Query: 217 EGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILF 276 EGLA RI G+VP L+G + LD+G L AGA +GEFE RL+G+L+ + ++LF Sbjct: 262 EGLALRIAQGDVPPPLQGVELRVLDVGLLQAGASMKGEFENRLRGLLDAVQSSTTPIVLF 321 Query: 277 IDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKV 336 IDE+HT+VGAG G DA N+LKPALARG L +GATT EY++YIEKD AL RRFQ V Sbjct: 322 IDEVHTLVGAGGQAGTGDAANLLKPALARGTLRTIGATTWAEYKKYIEKDPALTRRFQLV 381 Query: 337 FVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDE 396 V EP + +LRG+ + E HH V+I A+ AA +LSHRYI RQLPDKA+ L+D Sbjct: 382 QVHEPDEPRAVDMLRGVAAKLENHHQVRIAADAVAAAVSLSHRYIPSRQLPDKAVSLLDT 441 Query: 397 AASSIRMQIDSKPEELDRLDRRIIQLKLEQQAL--MKESDEASKKRLDMLNEELSDKERQ 454 A S + M + + P +L+ + RRI L +EQ+ L + +RL L +L+ + Sbjct: 442 ACSRVAMALHATPAQLEAVQRRIEALGVEQEVLLREAALGLPTAERLQALETDLASLRER 501 Query: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELE---- 510 + L E + E A +A L K + D + + + E Sbjct: 502 QATLAERFGQESALARRILETEAALMGLKPPVFSTGAATDPSAAAPETAAEATATEPAEP 561 Query: 511 ------KQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQ 564 + L LL+ V +A V+A WTGIPV RM+ E + +L + Sbjct: 562 PSVATLEALRRQLAELQGDAPLLQPVVDAGVVAAVVAEWTGIPVGRMVRDEVQSVLSLAD 621 Query: 565 ELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFD 624 L RVIGQ ++A++ I+ SRA L DP +PIG FL GP+GVGKTE +LA ++ Sbjct: 622 TLEKRVIGQRHGLEAITRRIQTSRARLDDPGKPIGVFLLAGPSGVGKTETALSLAEALYG 681 Query: 625 SDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHP 684 ++ ++ I+MSEF E H+VS L GAPPGYVGY EGG LTEAVRRRPYSV+LLDE+EKAH Sbjct: 682 GEQNLITINMSEFQEAHTVSTLKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDEIEKAHS 741 Query: 685 DVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKE----L 740 DV + QV D G + DG+GR +DF+NTV+I+TSN+GSDLI + D A E Sbjct: 742 DVHEMFFQVFDKGWMEDGEGRYIDFKNTVIILTSNVGSDLIANMCRDPDLAPTPEGLAQA 801 Query: 741 VLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEER-GYEIHISDEA 799 V + F + R+ VV ++P+ + + I ++Q+ R+ +R+EER G + + A Sbjct: 802 VRQPLLQTFPAALLGRLT-VVPYYPISDAMLEQIIRLQMLRIQRRIEERHGAQFSFDEAA 860 Query: 800 LKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGEL--VPGKVIRLEVNEDRIV 854 + L+ + GAR + + Q + +A L + + + + D Sbjct: 861 VDLVRRRCSEVESGARMVDGILTQNLLPRMATHFLQATVEGQELQSLHAGASGDDFT 917 >UniRef50_D1J7B8 ATP-dependent Clp protease ATP-binding subunit clpA homolog n=1 Tax=Ectocarpus siliculosus RepID=D1J7B8_ECTSI Length = 903 Score = 638 bits (1645), Expect = 0.0, Method: Composition-based stats. Identities = 349/905 (38%), Positives = 508/905 (56%), Gaps = 112/905 (12%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 +R T + + +Q + + F+ ++ LL + G + GIN ++R Sbjct: 1 MFERFTERALQVIMMSQEESRRLGHNFVGTEQILLGLLGEGCGVTINAVREYGINIRKVR 60 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES-RG 120 ++ + + + ++ + ++L + K ++ ++I++E LA L G Sbjct: 61 IEVERLIGKGTGFVAI--EIPFTPRAKKILEMSIKQSKDLNHSYINTEHIFLALLNDTDG 118 Query: 121 TLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQR---------------------- 158 A +L+ GA I I Sbjct: 119 ICAKVLQNLGANIPRIKSYILNELDQNHEGSPKVLANVASGEQSSNPNIKQTKDLFLFDD 178 Query: 159 --------QALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGV 210 L +YT DLTE AE+ K+DPV+GR+ EI R IQ++ RR KNNP+LIGEPGV Sbjct: 179 LDPSSLTAPNLMEYTTDLTESAERAKIDPVVGRENEIERVIQIISRRRKNNPILIGEPGV 238 Query: 211 GKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQE 270 GKTA+ EGLAQRI+ EVP L ++ LD+ L+AG KYRGEFEERLK ++ +L +Q+ Sbjct: 239 GKTAVAEGLAQRIVQREVPSELHDYKIFVLDITLLLAGTKYRGEFEERLKRIVQELKEQK 298 Query: 271 GNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALE 330 N+I+ IDE+HT+VGAG A+GA+DA N+LKPALARGEL C+GATT+DEYRQ+IEKD ALE Sbjct: 299 -NIIIVIDEVHTLVGAGAAEGALDAANILKPALARGELQCIGATTIDEYRQHIEKDPALE 357 Query: 331 RRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKA 390 RRFQ V+V EPS+E+TIAIL+GL+ RYE HH ++IT+ A+VAAA L +YIADR LPDKA Sbjct: 358 RRFQPVWVNEPSIEETIAILKGLRLRYEQHHRLEITNEALVAAANLGAQYIADRFLPDKA 417 Query: 391 IDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSD 450 IDLIDE ++ +R+ P + LD+ E + ++++ D A +++ E+ D Sbjct: 418 IDLIDEGSARVRLVNYRLPPAVQILDK-------ELRRILEDKDLAVREQRFETATEIRD 470 Query: 451 KERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELE 510 E + + V + ++ I L Sbjct: 471 DELSLRSQMGAIIKASNTPI------------------PKGVLERLKVGSQDIASIVALW 512 Query: 511 KQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRV 570 + + + RLL +E LH RV Sbjct: 513 TGVPVTKITKDENTRLL---------------------------------ELENVLHQRV 539 Query: 571 IGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMV 630 IGQ EAV AV+ A+RR+R G+ + RPI SF F GPTGVGKTEL K LA+F F +++AMV Sbjct: 540 IGQKEAVSAVARAVRRARVGMRNMKRPIASFFFSGPTGVGKTELTKTLASFFFGAEDAMV 599 Query: 631 RIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNIL 690 R+DMSEFME+H+V++L+G+PPGY+GY EGG LTEAVRR+PY+VIL DEVEKAHPDVFN+L Sbjct: 600 RLDMSEFMERHTVAKLIGSPPGYIGYNEGGQLTEAVRRKPYTVILFDEVEKAHPDVFNLL 659 Query: 691 LQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQER---------------FGELDYA 735 LQ+L+DGRLTD +GR +DF+NT++IMTSNLGS IQ+ + YA Sbjct: 660 LQILEDGRLTDSKGRIIDFKNTILIMTSNLGSKAIQDNDLSSQGMGFGGEKADTQKTKYA 719 Query: 736 HMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRL-EERGYEIH 794 + V + F+PEF+NRIDE++VF L + +I IA I + L +R+ +E+ + Sbjct: 720 QLCNTVGESLKAFFKPEFLNRIDEIIVFEQLTKTNITEIAVIMVNDLIERVKKEKDITLS 779 Query: 795 ISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKV----IRLEVNE 850 ++ ++LL E G++P YGARPL+RA+ + +E+ ++ + L + I ++V+ Sbjct: 780 LTPRMMELLVEEGFNPTYGARPLRRALVKLVEDKVSLEYLRYKNENDDEDPVDILVDVDL 839 Query: 851 DRIVA 855 +++ Sbjct: 840 NKVKV 844 >UniRef50_A4RQJ1 Chaperone, Hsp100 family, ClpB-type n=2 Tax=Ostreococcus RepID=A4RQJ1_OSTLU Length = 807 Score = 638 bits (1645), Expect = 0.0, Method: Composition-based stats. Identities = 342/734 (46%), Positives = 500/734 (68%), Gaps = 33/734 (4%) Query: 151 DQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGV 210 +++ AL+++ D+T+ A +G LDP++GR+EE+RR I +L RRTKNNPVL+G+ GV Sbjct: 49 QNPEDEELSALERFCTDVTDEARRGLLDPLVGREEEVRRLIHILCRRTKNNPVLLGQSGV 108 Query: 211 GKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDL--AK 268 GKTAIVEGLAQRI+N +VP+ L+G ++L +D+GA+ AG + GEFEERL ++ ++ A Sbjct: 109 GKTAIVEGLAQRIVNDDVPQALRGAKLLEVDLGAVGAGCQMPGEFEERLTIIVQEVVDAT 168 Query: 269 QEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAA 328 +G V+LFID++H + A + + +LKPAL RG L CVGAT+ D++++ IE+DAA Sbjct: 169 AKGPVVLFIDDIHNLCPAPPMNN--NGAAILKPALGRGLLRCVGATSADKFKKTIEQDAA 226 Query: 329 LERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPD 388 LERRFQ+V V EP+V+DT++ILRGL+ RYE HH++ I++ A++AAA LS RY++ RQLPD Sbjct: 227 LERRFQQVPVEEPNVDDTVSILRGLRPRYEQHHNIAISEGALLAAAQLSARYVSGRQLPD 286 Query: 389 KAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQAL---------MKESDEASKK 439 KAIDL+DEAA+++RM KP+ LD DR+I QL+ E+ L + + Sbjct: 287 KAIDLLDEAAAAVRMMKTHKPDGLDMADRKIAQLQKERDQLLRKNAGELAKAGTSNVAAA 346 Query: 440 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQT-------IKAELEQAKIAIEQARRV 492 L + LS +++ E++ ++ E+ + IK ++E AK+ I QA + Sbjct: 347 ELQKIAAALSVEKKARKEMQSKYDTERRIQDEYRRAYANNSFIKRKVENAKMKIAQATQA 406 Query: 493 GDLARMSELQYGKIPELEKQLEAATQLEGK-------------TMRLLRNKVTDAEIAEV 539 + ++ EL+K + E + ++R +VTD ++A V Sbjct: 407 EAGSVLAAELGRAQAELKKLEQQVKTTEDELTAAEAAVLELKDGGAMMREEVTDNDVAAV 466 Query: 540 LARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIG 599 ++RWTG+PV++++ SE+ KLL++E ELH RVIGQ AV +V+ A++RSRA LADPN P+ Sbjct: 467 VSRWTGVPVAKLVSSEKAKLLQLEAELHQRVIGQEAAVTSVAEAVQRSRADLADPNGPVA 526 Query: 600 SFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEG 659 SF+FLGPTGVGKTEL KALA+++F+SD A+VR+DMSE+MEKHSV+RL+GAPPGYVGY+EG Sbjct: 527 SFMFLGPTGVGKTELAKALASYLFNSDTALVRLDMSEYMEKHSVARLIGAPPGYVGYDEG 586 Query: 660 GYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSN 719 G LT+AVR++PYSV+L DE+EKAH DVFN+LLQ+LD+G +TD QGR V FRN ++IMTSN Sbjct: 587 GMLTDAVRQKPYSVVLFDEIEKAHVDVFNVLLQLLDEGHVTDTQGRNVSFRNCLIIMTSN 646 Query: 720 LGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQL 779 LGSD I + ++K+ V+ V +FRPEF+NR+DE +VF PL I I Q+Q Sbjct: 647 LGSDEISYANKRRNKVNVKDAVMQHVRSHFRPEFVNRLDEFIVFEPLTHAQIEEIVQLQT 706 Query: 780 KRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELV 839 K+L +R++ + + + A++ L+ GYDP YGARP++RAIQ+++ PLA +L G Sbjct: 707 KKLSQRIDTQRMNLSLDRSAIEHLARQGYDPAYGARPVRRAIQRELIQPLANAMLRGVFN 766 Query: 840 PGKVIRLEVNEDRI 853 I + + I Sbjct: 767 EDDTILVTADRQGI 780 >UniRef50_A6V7C9 Type VI secretion ATPase, ClpV1 family n=10 Tax=Gammaproteobacteria RepID=A6V7C9_PSEA7 Length = 875 Score = 637 bits (1643), Expect = 0.0, Method: Composition-based stats. Identities = 309/831 (37%), Positives = 465/831 (55%), Gaps = 21/831 (2%) Query: 42 EGGSVSPLLTSAGINAGQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQ-K 100 G ++ L A ++AG+L + + + +LV+ L LA + Sbjct: 49 PQGLLARALQDAAVDAGELNAALQA-----RGEHSASRNPVFAPELVQWLQDALLLANLE 103 Query: 101 RGDNFISSELFVLAALESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQ--R 158 G + I +LA L + A +I + + + Sbjct: 104 LGRSQIDQAALILALLRNPLRYAGSRYQPLLARLDIERLKDFALSQPLEGAPSGKPGGGE 163 Query: 159 QALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEG 218 L+++T +LT++A GKLDPV+ RD IR+ + +L RR KNNP+++GE GVGKTAIVEG Sbjct: 164 SLLQRFTHNLTQQARDGKLDPVLCRDGAIRQMVDILARRRKNNPIVVGEAGVGKTAIVEG 223 Query: 219 LAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFID 278 LA RI GEVP L+ +L+LDMG L AGA +GEFE RLKGV++++ ILFID Sbjct: 224 LASRIAAGEVPPALRDVELLSLDMGLLQAGASVKGEFERRLKGVIDEVKAALRPTILFID 283 Query: 279 ELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFV 338 E HT++GAG G DA N+LKPALARGEL + ATT EY++Y EKD AL RRFQ V + Sbjct: 284 EAHTLIGAGGQAGGSDAANLLKPALARGELRTIAATTWAEYKKYFEKDPALARRFQPVQL 343 Query: 339 AEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAA 398 EPSV + + ILRGL YE H + + D A+VAAA LS RY+A RQLPDKA+D++D A Sbjct: 344 HEPSVAEAVTILRGLARVYEESHGIYLRDDAVVAAAELSARYLAGRQLPDKAVDILDTAC 403 Query: 399 SSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLN---EELSDKERQY 455 + +R+ + + PE L+RL + + + ++QAL ++++ + L E L+ E + Sbjct: 404 ARVRISLAAAPESLERLRGELAEGERQRQALRRDAEAGLPIDHEALQVLEERLAQAESER 463 Query: 456 SELEEEWKAEKASLSGTQTIKAELEQAKIAI-EQARRVGDLARMSELQYGKIPELEKQLE 514 LE++W ++ ++ +L +A+ A E+ D ++G + LEK L Sbjct: 464 HVLEDQWSRQRELAERLLALRQQLARAREASREEQGGEADAEAFPADEHGGVEALEKALH 523 Query: 515 AATQLEGKTM---RLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVI 571 Q RL+ +V +AEV++ WTG+PV ++ K++ +L R+ Sbjct: 524 ETRQALADAQAQGRLVSFEVCPRLVAEVISAWTGVPVEQLAREHNAKVVGFADDLRARIR 583 Query: 572 GQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVR 631 GQ +A+ A+ ++R + +GL P+ P G FL +GP+GVGKTE ALA+ ++ + + Sbjct: 584 GQEQAIRALDRSMRATASGLNKPDAPAGVFLLVGPSGVGKTETALALADLLYGGERFITT 643 Query: 632 IDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILL 691 I+MSEF EKHSVSRL+GAPPGYVGY EGG LTEAVR++PYSV+LLDEVEKA PDV N+ Sbjct: 644 INMSEFQEKHSVSRLIGAPPGYVGYGEGGMLTEAVRQKPYSVVLLDEVEKADPDVLNLFY 703 Query: 692 QVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLI---QERFGELDYAHMKELVLGVVSHN 748 Q+ D G DG+G +DFRNT+ +MTSNL S+ I +++ + V+S + Sbjct: 704 QIFDRGVANDGEGHEIDFRNTLFLMTSNLASERIAALCRDGERPSPEILEDTIRPVLSQH 763 Query: 749 FRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGY 808 F+P + R+ VV ++P+G + + + I+L RL +RL R S + L E Sbjct: 764 FKPALLARM-RVVPYYPVGGRVLRELIGIKLDRLGERLARRHLAFDYSSALVDHLGERCI 822 Query: 809 DPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRL--EVNEDRIVAVQ 857 GAR + + + +A ++L +++R+ ++E V + Sbjct: 823 QSDSGARLIDHLLDTHLLPLVADRLLQAMARDERLVRVHATLDEHGHVFCE 873 >UniRef50_B3XE87 Type VI secretion ATPase, ClpV1 family n=1 Tax=Escherichia coli 101-1 RepID=B3XE87_ECOLX Length = 843 Score = 637 bits (1642), Expect = 0.0, Method: Composition-based stats. Identities = 288/863 (33%), Positives = 461/863 (53%), Gaps = 45/863 (5%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 + +LT + L A +LA+ + ++ +HL+ +++ + + L +N + Sbjct: 9 ISKLTPSAKKHLDMAINLAVSRRHYEVDIIHLIYVIISNDENLIEQLAKETLLNPPSIIN 68 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLA--QKRGDNFISSELFVLAALESRG 120 I + LPQ G S+ LV + A + + + LF R Sbjct: 69 AIEKEFMELPQ--GDVNTPVFSETLVSFIEKSWLHATTKWSCSSLDTPALFATVLYTERE 126 Query: 121 TLADILKAAGATTANITQA--IEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLD 178 L + + + + + + A L++YTI+L+ AE+G++D Sbjct: 127 LLPEHVSYSLNCQKKVAENILRQSCEASAITTQDNAFSSNSMLERYTINLSTSAEEGRID 186 Query: 179 PVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVL 238 PVIGRD EIR+ I +L RR +NNP+L GEPGVGKT I+EGLA RI G+VPE L+ VL Sbjct: 187 PVIGRDNEIRKLIDILLRRRQNNPILTGEPGVGKTCIIEGLALRIKEGKVPETLRNVEVL 246 Query: 239 ALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNM 298 LD+ AL+AGA +GEFE RL+ +L ++ K+ ++LFIDE H +VGAG G DA N+ Sbjct: 247 TLDLTALLAGASAKGEFENRLQHILKEIEKKAKRIVLFIDEAHMLVGAGGLAGQTDAANL 306 Query: 299 LKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYE 358 LKPALARG L + ATT EY++Y EKDAAL RRFQ + V+EP V A+LR L + Sbjct: 307 LKPALARGTLRVIAATTWSEYKKYFEKDAALARRFQIIRVSEPDVNAASAMLRALVPAFI 366 Query: 359 LHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418 HH+V IT+ AI AA LS+RYI+ R+LPDKA+ L+D A S + + P+E++ ++ Sbjct: 367 SHHNVDITEGAIKAATNLSNRYISGRKLPDKAVSLLDTACSHVSLSQTHIPKEIEYIEAN 426 Query: 419 IIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAE 478 I + E AL R + LN+ ++ + L WK + ++ + + Sbjct: 427 IKRDMTELSALENN----DVLRKNQLNKNINFFNDRLLLLNSIWKHQLDLVNKIKECQD- 481 Query: 479 LEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAE 538 Y +I L +L+ + + ++ +V + IA+ Sbjct: 482 ------------------------YDEIHALRMELKKSHR---DVAPMVFERVDETCIAD 514 Query: 539 VLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPI 598 V++ WTGIP+ +E+E+EK + L R+IGQ+ A+ +S+ I +A L DP++P Sbjct: 515 VVSEWTGIPLGTFLETEKEKSKALLSRLQQRIIGQDYALSVISSQIEICQANLHDPHKPT 574 Query: 599 GSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEE 658 G +LF GP+G+GKTE ALA ++ ++ I+MSEF E HS+S L GAPPGYVG+ Sbjct: 575 GIYLFAGPSGIGKTETAHALAELVYGGSNNLITINMSEFQEAHSLSGLKGAPPGYVGFGH 634 Query: 659 GGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTS 718 GG LTE V+R P+ VILLDE+EKAHPDV + QV D G + DG+G+ ++FRNT++IMTS Sbjct: 635 GGILTEGVKRNPFCVILLDEIEKAHPDVIELFYQVFDKGTMEDGEGQLINFRNTLIIMTS 694 Query: 719 NLGSDLIQER--FGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQ 776 NL + + + G+ +++ ++ + F+ F+ R++ + F PL + + I + Sbjct: 695 NLAASQLNDLWISGDKSISNILSVIRPIYDDFFQSAFMGRVNLI-PFLPLSQDSLKRITK 753 Query: 777 IQLKRLYKRLE---ERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQI 833 ++++++ +R+ + + + + N GAR + + + LA+ I Sbjct: 754 MKIEKICQRVSDATDHKIIVKYKKSLITWILGNCKYIQSGAREIDMILNHNVLPLLAKHI 813 Query: 834 LSGELVP-GKVIRLEVNEDRIVA 855 + ++ + L + + IV Sbjct: 814 CNNDVNNFTGCLNLFIKNNTIVV 836 >UniRef50_C7RF24 ATPase AAA-2 domain protein n=1 Tax=Anaerococcus prevotii DSM 20548 RepID=C7RF24_ANAPD Length = 834 Score = 637 bits (1642), Expect = 0.0, Method: Composition-based stats. Identities = 316/851 (37%), Positives = 523/851 (61%), Gaps = 25/851 (2%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 + K +A+ +A++LAL + NQ + LHL+ ++ +QE + +L ++ L +I Sbjct: 5 YSLKASMAIKEARNLALLNKNQEVTDLHLLKSVTDQENHVLDTMLEEFSVDKDNLTDEIT 64 Query: 66 QALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLA-D 124 +A+ +L +G + S+D R L L + A+KR I++ LA + T + Sbjct: 65 KAIGKLRSNDG-LSKLYFSRDYQRTLLLAKENAKKRYAEKITTSHLFLAFFDLEKTTSKH 123 Query: 125 ILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRD 184 IL+ G + Q + +++ +E + KY IDLT+RA++GK+DPVIG D Sbjct: 124 ILEKVGLSHEKCEQYLVNKEKEVENSERFSEKIGDLIDKYGIDLTKRAKEGKIDPVIGMD 183 Query: 185 EEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGA 244 E+ R ++L RR KNNP+LIGEPGVGK+A+VEGLA +I G+V + LK + + +L++ + Sbjct: 184 YEVDRLSEILTRRIKNNPILIGEPGVGKSAVVEGLALKIAQGDVVDFLKDKIIFSLNVSS 243 Query: 245 LVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALA 304 ++AG RGEFE R+K +++ + EG +ILFIDE+HT+VGAG + G +D N++KP L+ Sbjct: 244 VLAGTGLRGEFESRVKDLMDIVTSFEGKIILFIDEIHTIVGAGSSSGGIDISNIIKPKLS 303 Query: 305 RGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQ 364 RGE+ +GATT+ EYR +IEKD ALERRFQK+ + E S+E++ ILRG+K YE H++ Sbjct: 304 RGEITIIGATTVAEYRSHIEKDGALERRFQKILIKEASIEESYDILRGIKTNYENFHNLI 363 Query: 365 ITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKL 424 ITD AI A LS RYI DR+LPDKAIDL+DEAAS ++ ++++ P+ LD L I++L+ Sbjct: 364 ITDEAIKACVDLSDRYITDRKLPDKAIDLMDEAASMLKNKLENTPDSLDDLREDILELE- 422 Query: 425 EQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKI 484 ++L ++D+ + +LD L + E E+ L + I++++ + Sbjct: 423 --ESLQLKADDKKENKLDELKKLYDKDLEIKQEETED-------LRDLRRIRSDIRELVF 473 Query: 485 AIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWT 544 ++ +++ K+PEL+K+ ++ + + +++ K+ ++ I +++R T Sbjct: 474 IKKRLLNEDKFEEYTKITKVKLPELKKEEKSYLNKKYEFVKI--EKLEESHIKTLISRIT 531 Query: 545 GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFL 604 IPV + + +EK+L +++ L +VIGQ EAV+ +SNAI R+ G+ + ++PIG+FLF Sbjct: 532 KIPVEDLNQDRKEKILNIDKALGKKVIGQQEAVEKISNAIIRTAVGMKNRHKPIGTFLFT 591 Query: 605 GPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTE 664 G TG+GKT L K LA+ +++ +E+++R DMSE+M+ +S ++ +GAPPG+VGYEEGG LTE Sbjct: 592 GNTGLGKTYLAKVLADTLYEGEESLIRFDMSEYMDSNSTTKFIGAPPGFVGYEEGGQLTE 651 Query: 665 AVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDL 724 VR PYSVIL DE+EKA+ +F+ILLQ+LD+GRLTD +G T+DF NT++I+TSN+ + Sbjct: 652 KVRINPYSVILFDEIEKANKQIFDILLQILDEGRLTDNRGITIDFTNTIIILTSNILAKE 711 Query: 725 IQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYK 784 +L + F+PEFINR+D +V F+ L + + I +I L+ + Sbjct: 712 -----------DDSDLYKHELYQYFKPEFINRLDAIVKFNTLSYEDLMEITKIYLEEVKN 760 Query: 785 RLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVI 844 E G ++E ++ + + +GAR ++R + +I ++++IL +L V+ Sbjct: 761 DFGEIGVNFAYTNEVIEKIVDLSDYEEFGAREIRRVVDDKIVTMVSRKILQDDLDSTNVL 820 Query: 845 RLEVNEDRIVA 855 + + +D Sbjct: 821 TIMLEDDEFSF 831 >UniRef50_A6EIG8 Putative ATP-dependent protease n=1 Tax=Pedobacter sp. BAL39 RepID=A6EIG8_9SPHI Length = 828 Score = 637 bits (1642), Expect = 0.0, Method: Composition-based stats. Identities = 297/856 (34%), Positives = 472/856 (55%), Gaps = 54/856 (6%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M + ++ +LA+ AQSLA + N HL+ L+++E G + L S + + Sbjct: 1 MNISNISESVRLAIRVAQSLAKEYHNAEFSAAHLLKGLMHKEVGLIG-FLNSIDKDEAYI 59 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESR- 119 ++ L +V DV+ +++ + D + K G + I+ + A + Sbjct: 60 SEWAEVRIDELDKVAVAPDDVKGGREIAGIFEEADLVRIKLGLDLITPVCVLTALCKPTV 119 Query: 120 GTLADILKAAGATTANITQAIEQMRGGESVNDQ---------GAEDQRQALKKYTIDLTE 170 G D LK+ I + +E + AL KY ID Sbjct: 120 GFPPDQLKSFPIKEKEILDLYLDDTELKQAVKPGTTVDAKTGSSEGAKAALHKYCIDRIA 179 Query: 171 RAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPE 230 +A GK DP+IGRD+E R +++L RRTK N ++ G+ GVGKTA+V+GLAQ I++G VP Sbjct: 180 QARDGKTDPIIGRDKETRMVLEILGRRTKPNVIITGDAGVGKTALVDGLAQDILSGNVPA 239 Query: 231 GLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKAD 290 LK ++ LD+G+L+AGA Y+GE E+RLK +L ++ + + ILFIDE+HT++ Sbjct: 240 ILKNVQLFELDLGSLIAGASYKGEIEDRLKNILKEIKQYD-KAILFIDEIHTLLDNKGPI 298 Query: 291 GAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAIL 350 G GN+LKP LARGE+ +GATT+DEYR+ IE + A RRF+ + V EP+ I +L Sbjct: 299 GG-GVGNLLKPELARGEITVIGATTMDEYRKIIEPEQAFSRRFEVLQVQEPNEASAIKML 357 Query: 351 RGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPE 410 L E+YE HH ++I AI L+ RY+ DR+LPD A DL+D ++++M D+ + Sbjct: 358 EKLAEKYEQHHQLKIQKDAIPECVRLAKRYMKDRRLPDAAFDLLDRTMAAMKMMNDTSDQ 417 Query: 411 ELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLS 470 L LD L E + +L + + S + ++ + Sbjct: 418 VLAELDA---------DLLQLNEAEVADDQLADYRWLYQQMQDKVSPILVGQLTDETQVD 468 Query: 471 GTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNK 530 +T++ + ++ + + + ++ Sbjct: 469 AFETVEEFKDYISRNLDALKVLAETK-------------------------------HDE 497 Query: 531 VTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590 V +IA +++ TGIP+ ++ E+EKLL ME L RV+GQ+ A+ +V++AI SR+G Sbjct: 498 VAKQDIASIVSYKTGIPLGKIQAQEKEKLLNMEGYLKKRVVGQDRALKSVADAILESRSG 557 Query: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAP 650 L +PIGSF LGPTG GKTEL K++A F+F+ ++AM+R DMSEF E+HS + L GAP Sbjct: 558 LNKKGQPIGSFFLLGPTGTGKTELAKSIAEFLFNDEKAMIRFDMSEFKEEHSAALLYGAP 617 Query: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFR 710 PGYVGYEEGG L +R++PYSV+L DE+EKAHP VF+ LQ+LD+G + D G+ DF Sbjct: 618 PGYVGYEEGGLLVNKIRQQPYSVLLFDEIEKAHPSVFDTFLQILDEGHMHDRLGKEGDFS 677 Query: 711 NTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQH 770 N +++ TSN+GS+ I E+ + + ++ +++ +FRPEF+ R+ E+V F P+ E + Sbjct: 678 NALILFTSNIGSEWIAEQLSK-SLVPTSQQLMEIMARHFRPEFLARLSEIVPFAPISEDN 736 Query: 771 IASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLA 830 + I +IQL+ L + L+++G I + A K+L+ +G+ P YGAR L I+ ++ P++ Sbjct: 737 VVRIFEIQLRSLVEALDKQGITFEIDEAATKMLALSGFTPKYGARQLSGVIRNELRRPIS 796 Query: 831 QQILSGELVPGKVIRL 846 + I+SG L G I++ Sbjct: 797 KYIISGALKKGNFIQV 812 >UniRef50_Q88IA4 Chaperone-associated ATPase, putative n=14 Tax=Gammaproteobacteria RepID=Q88IA4_PSEPK Length = 878 Score = 634 bits (1635), Expect = e-180, Method: Composition-based stats. Identities = 305/877 (34%), Positives = 462/877 (52%), Gaps = 52/877 (5%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +L + A A +L L + +E HL+ LL+ ++P+L + A +L+ Sbjct: 20 FAKLNETSRTATESAAALCLSEHHYEVEVEHLLLQLLDNNDSDLAPILRHYQVVAERLQA 79 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQ-KRGDNFISSELFVLAALES--- 118 + AL + G S + R++ LA + G + S + A L+ Sbjct: 80 QLVTALGTFKK--GNTRTPALSPHITRMIEQAWLLASIEYGVGQVRSAHLLQALLDDAEL 137 Query: 119 ----------------RGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALK 162 ++ + + + A + AL Sbjct: 138 RRVVIASAPELEKINADDLRLNLAALVEGSAESRQASPLASPAAPVSTSSKASGKTPALD 197 Query: 163 KYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQR 222 +YT++LT+ A +G++DPV+GR+ E+R+ + +L RR +NNP+L GE GVGKTA+VEGLA R Sbjct: 198 QYTVNLTQSAREGRIDPVLGREFEVRQMVDILTRRRQNNPILTGEAGVGKTAVVEGLALR 257 Query: 223 IINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHT 282 I G+VP LK + LD+G L AGA +GEFE RLK V+ ++ + +ILFIDE HT Sbjct: 258 IAQGDVPAVLKDVALHTLDLGLLQAGAGVKGEFENRLKAVIEEVKRSLHPIILFIDEAHT 317 Query: 283 MVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPS 342 ++G+G G DA N+LKPALARGEL + ATT EY++Y EKDAAL RRFQ V V EP Sbjct: 318 LIGSGGQAGQNDAANLLKPALARGELRTIAATTWAEYKKYFEKDAALARRFQVVKVEEPD 377 Query: 343 VEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIR 402 + I +LRGL + HH V + D A+V A LS+RYI RQLPDKA+ ++D A + I Sbjct: 378 EDKAIHMLRGLLGKMREHHKVAVMDEALVQAVRLSNRYITGRQLPDKAVSVLDTACARIA 437 Query: 403 MQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEW 462 + S P L+ R+I L+ E L E+ + D R+ L+ Sbjct: 438 LAQSSLPGALEDCRRQIDNLQAEIDVLGHEAGKG------------HDHARRLESLQAAL 485 Query: 463 KAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGK 522 +AE+ + +E ++ L ++ ++ L +L Sbjct: 486 QAEQQQEQQLNAQWQQ------ELELVEQLKALDAANDADAQQLNTLRAELARV----QG 535 Query: 523 TMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSN 582 L+ V IA+V++ WTGIP+ +M+ E + + R+ L RV+GQ+ A+ + Sbjct: 536 DQPLVHALVDSGAIAQVISGWTGIPLGKMLRDEIDTVQRLPALLGERVLGQDHALHEIGK 595 Query: 583 AIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHS 642 I+ SRA + DPN+PIG FL LGP+GVGKTE ALA+ ++ + ++ I+MSE+ E H+ Sbjct: 596 RIKISRARMEDPNKPIGVFLLLGPSGVGKTETALALADTLYGGERNLITINMSEYQEAHT 655 Query: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702 VS L G+PPGYVGY EGG LTEAVRR+PYSV+LLDEVEKAHPDV + QV D G L DG Sbjct: 656 VSSLKGSPPGYVGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVLELFFQVFDKGVLDDG 715 Query: 703 QGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHN----FRPEFINRID 758 +GR ++FRNTV+I+TSN G++ I + E ++ + F+P F+ R+ Sbjct: 716 EGREINFRNTVIILTSNTGTERIMQTCLNATELPTPEAIVEDLRDQLNHVFKPAFLGRL- 774 Query: 759 EVVVFHPLGEQHIASIAQIQLKRLYKRLEE-RGYEIHISDEALKLLSENGYDPVYGARPL 817 +V F+P+ +Q + I ++L+R+ KR E+ +K ++ + GAR + Sbjct: 775 SIVPFYPVQDQILERIVALKLERIAKRFARNHQAELSYDQALVKAIAARCTEVDSGARNI 834 Query: 818 KRAIQQQIENPLAQQILSGELV--PGKVIRLEVNEDR 852 + Q + LAQ++L P + + +E+ D Sbjct: 835 DNILSQTLMPELAQRVLERMAQDAPIQHLAIELGSDG 871 >UniRef50_D2QJP1 ATPase AAA-2 domain protein n=12 Tax=Bacteria RepID=D2QJP1_9SPHI Length = 828 Score = 634 bits (1634), Expect = e-180, Method: Composition-based stats. Identities = 307/861 (35%), Positives = 477/861 (55%), Gaps = 54/861 (6%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 MR LT + AL A++LA + N+ + HL+ A+L+ + G + LL + + + Sbjct: 1 MRQLPLTEPVEKALHIARALAREYHNEQLTAAHLLRAVLHDDVGGSA-LLRALDQDVAYI 59 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESR- 119 + + P+ + + + RVLN D K G +++ + A + Sbjct: 60 FDWADVWIEEQPRSALAITEPLQDESVERVLNEADFFRVKLGLDYVELICVLTALTKPGV 119 Query: 120 GTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQAL----------KKYTIDLT 169 G A+ L++ ++ + D+ + + Y ID T Sbjct: 120 GFTAEQLRSFPLQERDLLDRFLRDLSTPRATDKTSSNGNGQAALPGLKTKGQFPYCIDKT 179 Query: 170 ERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVP 229 +A KLDPV+GR +E+R +++L RR+K N +++G+PGVGK+A+++GLAQ I+ G+VP Sbjct: 180 AQARAKKLDPVVGRKQEVRTMLEILGRRSKPNVMVVGDPGVGKSALLDGLAQLIVEGQVP 239 Query: 230 EGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKA 289 +K +L LD GAL+AGA Y+GE E+RLK VL ++ +QE ILFIDE+HT++ + Sbjct: 240 ARMKNAILLELDSGALLAGASYKGEVEDRLKSVLKEVRQQE-MCILFIDEIHTLLDPKGS 298 Query: 290 DGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAI 349 G N+LKP LARGEL VGATTL+EYR+ IE D AL RRF+ + V EP+ + + Sbjct: 299 AGN-GIANLLKPELARGELTVVGATTLEEYRKLIEPDQALSRRFELLNVTEPTEQVAERM 357 Query: 350 LRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKP 409 +RGL YE HH ++I + A L+ RY +R+LPD A+DL+D ++IR+ I++ Sbjct: 358 IRGLIPVYEQHHKLEIQPDVVAACIRLARRYSKERRLPDSALDLLDRTMAAIRIAIETSE 417 Query: 410 EELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASL 469 EL +L+ + L + E ++ + + + L Sbjct: 418 TELTQLE-----------------KAVQELSQSDLPPGEALDEYRWIDTQLHHQISPVLL 460 Query: 470 SGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRN 529 + LE A + L R EL ++P Sbjct: 461 GNWEDTINPLEIETPAAYHDYIMAKLRRFRELAGQQVP---------------------- 498 Query: 530 KVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRA 589 VT ++ V+A TGIP+ ++ E+E+LL ME L RV+GQN A+ A+S+AI SR+ Sbjct: 499 VVTANDLVAVVAHKTGIPMGKVQGQEKERLLSMESFLQRRVVGQNHALRALSDAILESRS 558 Query: 590 GLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGA 649 GL +PIGSF LGPTG GKTEL K+LA+F+F+ + A++R DMSEF E+HS + L GA Sbjct: 559 GLQRAGQPIGSFFLLGPTGTGKTELSKSLADFLFNDERALIRFDMSEFKEEHSAALLYGA 618 Query: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709 PPGYVGYEEGG L +R++PYSV+L DE+EKAH VF++ LQ++D+GRL D G+ DF Sbjct: 619 PPGYVGYEEGGLLVNKIRKQPYSVVLFDEIEKAHGSVFDVFLQIMDEGRLHDKLGKEGDF 678 Query: 710 RNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQ 769 N ++I TSN+ S+ I F + + ++ ++ FRPEF+ RI E++ F P+ E+ Sbjct: 679 TNALLIFTSNISSEWITNEF-QAGRMPTSQQLMTRMTGQFRPEFLARITEIIPFSPIQEE 737 Query: 770 HIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPL 829 ++ I +IQL L K L ++G + ++ EA + L+ G+ P YGARPL I+ Q+ P+ Sbjct: 738 NVVRIFEIQLAHLQKSLVQQGVTLTLTKEANRQLALQGFSPHYGARPLAGIIRNQLRRPI 797 Query: 830 AQQILSGELVPGKVIRLEVNE 850 ++ ++SG+L G+ + L+ NE Sbjct: 798 SRLLISGQLQKGQSLNLDWNE 818 >UniRef50_Q3LW37 ATP binding subunit of Clp protease n=1 Tax=Bigelowiella natans RepID=Q3LW37_BIGNA Length = 897 Score = 633 bits (1632), Expect = e-179, Method: Composition-based stats. Identities = 324/890 (36%), Positives = 500/890 (56%), Gaps = 96/890 (10%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSA-LLNQEGGSVSPLLT-------S 52 + + + LA AQ A I ++ L+ + + +L Sbjct: 62 IDPSKFSEDLTNILALAQMEAAARSTFKITGPFILLGILMARGSTTGYAMLKTWKVNYLK 121 Query: 53 AGINAGQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFV 112 A I A ++R+D+ LP+ + R+L+ ++ A G I + V Sbjct: 122 ARIEADKIRSDLTNLFGELPETYS------FDDEAHRILDYAERYANFFGLVQIETIHVV 175 Query: 113 LAALE-SRGTLADILKAAGATTANITQAIEQMRGGESVNDQG---------------AED 156 +A R I++ ++ + ++ +R S+ + Sbjct: 176 MAMFRYKRSNAYRIIETITPNFESLEEIVDNIRPNISLKRDSKGFIYQAQKSELPELDPE 235 Query: 157 QRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIV 216 + + +DLTE+AE G+ DPVIGR +EI R I+VL R++KNNP L+G+PGVGKTAI Sbjct: 236 SEDIIDTFGVDLTEKAEFGEGDPVIGRKKEIDRLIRVLARKSKNNPCLVGDPGVGKTAIA 295 Query: 217 EGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILF 276 EGLA RI N EVPE LK +R++ L++ +VAG+KYRG+FE R+ ++ ++A+ E +VILF Sbjct: 296 EGLAYRIWNDEVPEFLKNKRIINLELTKIVAGSKYRGDFESRILSII-EMARFEDSVILF 354 Query: 277 IDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKV 336 IDE+HT++GAG ++G +DA NMLKP L+RGE+ +GATT +E+R+YI+ D ALERRFQ V Sbjct: 355 IDEIHTIMGAGSSEGTLDAANMLKPPLSRGEISLIGATTEEEFRKYIKADGALERRFQAV 414 Query: 337 FVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDE 396 V EP++ + I IL G+K+ + +H V +D AI A S +YI+D+ LPDKAIDL+DE Sbjct: 415 KVPEPTISEAIQILHGIKKNFGNYHGVVYSDEAIEACVKFSKQYISDKFLPDKAIDLLDE 474 Query: 397 AASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYS 456 + + ++M+ + ++ I + ++A++++ + K L + L E+ Sbjct: 475 SGAFVKMKEGYAIKNIEDYTFLIKSYRETKKAVVEKDIQKLKATLITEIKALKKVEQVLQ 534 Query: 457 ELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAA 516 +++ +A K ++ + K+P++E +E Sbjct: 535 KIKLSQEAIKRDINNI-----------------------------RVVKVPDVETVIEEM 565 Query: 517 TQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEA 576 T ++ K + +SE E LL +E LH VIGQ EA Sbjct: 566 TGVKIKEVS---------------------------KSESENLLNLESILHKSVIGQEEA 598 Query: 577 VDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSE 636 V AVS A+R+SR GL DP RPI SF+F GPTGVGKTEL K L+ FDS++AM+R DMS+ Sbjct: 599 VTAVSKAMRKSRVGLRDPKRPIASFIFAGPTGVGKTELAKTLSRVYFDSEDAMIRFDMSD 658 Query: 637 FMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDD 696 F EKH+VS+L+G+PPGY+GY +GG LTEAVR+ P+S++L DE+EKAHPDV+ LLQVLDD Sbjct: 659 FAEKHNVSKLIGSPPGYIGYSDGGQLTEAVRKTPHSLVLFDELEKAHPDVYLPLLQVLDD 718 Query: 697 GRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELV---------LGVVSH 747 GRL D +G+ VDF+NT++I+TSNLG+ ++ R + + E + ++ Sbjct: 719 GRLADSKGKIVDFKNTIIILTSNLGAKEVEARRKAIKQSSETEDISEKESFSIYNAAIAE 778 Query: 748 NFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENG 807 FRPEF+NRIDE+++F L + + I I + + R + G I ++ +L++E G Sbjct: 779 YFRPEFLNRIDEIIIFKRLTQSQVYEIFAIFMNSVKHRAAKLGITIQETERLRQLVTEAG 838 Query: 808 YDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857 Y P +GARPLKR I + IE+PL++ ILS E+V G + L+ ++ ++ Sbjct: 839 YTPAFGARPLKRTISRLIESPLSEMILSNEVVSGDTVLLDYYNKKVTFIK 888 >UniRef50_B2RGN2 ATP-dependent Clp protease ATP-binding subunit ClpC n=34 Tax=Bacteroidetes RepID=B2RGN2_PORG3 Length = 859 Score = 633 bits (1632), Expect = e-179, Method: Composition-based stats. Identities = 320/913 (35%), Positives = 471/913 (51%), Gaps = 125/913 (13%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 T F+ +L + A + L+ ++ ++ GIN +L+ I Sbjct: 5 FTQTFRNSLEYSYQEATRLGVVAVTQDMLVLGIIRDGDNGAIDIMRHYGINLYELKRLIE 64 Query: 66 QALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES--RGTLA 123 G + ++ + D +S +L+ L S + Sbjct: 65 LEAIAESLPASPEGLPIFTPSAREAIDDATDICADMEDEAVSPVHLLLSILNSTQESLVQ 124 Query: 124 DILKAAGATTANITQAIEQMRGGESVNDQGAED--------------------------- 156 I G I R + Sbjct: 125 KIFMKQGIKYDTILSDYFGQRNPSEGKSPSEMEILDGYQDNDFDDEEDESSPPSGNSGTG 184 Query: 157 ------------------------QRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQ 192 AL + D+T A GKLDPV+GR++EI R IQ Sbjct: 185 GGSGDAPEQNTGGGDTTTTTRSGGDTPALDTFGTDITAMAAAGKLDPVVGREQEIERVIQ 244 Query: 193 VLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYR 252 +L RR KNNPVLIGEPGVGK+AIVEGLA+RI+N +V L +R+++LD+ +VAG KYR Sbjct: 245 ILSRRKKNNPVLIGEPGVGKSAIVEGLAERIVNRKVSRILFDKRIISLDLAQMVAGTKYR 304 Query: 253 GEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVG 312 G+FEERLK VL++L K +ILFIDE+HT+VGAG A G+MD NMLKPALARG++ C+G Sbjct: 305 GQFEERLKAVLDELKKNP-QIILFIDEIHTIVGAGSAAGSMDTANMLKPALARGQVQCIG 363 Query: 313 ATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVA 372 ATTLDEYR+ IEKD ALERRFQKV +A + E+T+ IL+ +KE+YE +H V Sbjct: 364 ATTLDEYRKNIEKDGALERRFQKVPIAPSTAEETLTILQNIKEKYEDYHGV--------- 414 Query: 373 AATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKE 432 RY D+AI E + +D +D + + Sbjct: 415 ------RY------TDEAIKAAVELTDRYVSDRFFPDKAIDAMDEAGASVHI-------- 454 Query: 433 SDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRV 492 + + ++AEL + A + Sbjct: 455 -------------------------------TNVVAPKEIEILEAELASVRENKLSAVKA 483 Query: 493 GDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMM 552 + + + + ++Q+ + + M R V + +A V+A TG+P R+ Sbjct: 484 QNYELAASFR-DQERRTQQQIAEEKKKWEEQMSKHRETVDENVVAHVVALMTGVPAERLS 542 Query: 553 ESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKT 612 E E+L M +L +V+GQ+ A++ + AI+R+R GL + +PIGSFLFLGPTGVGKT Sbjct: 543 TGEGERLRTMADDLKTKVVGQDTAIEKMVRAIQRNRLGLRNEKKPIGSFLFLGPTGVGKT 602 Query: 613 ELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYS 672 L K LA ++F+ + AM+R+DMSE+MEK SVSRLVGAPPGYVGYEEGG LTE VRR+PYS Sbjct: 603 YLAKKLAEYLFEDENAMIRVDMSEYMEKFSVSRLVGAPPGYVGYEEGGQLTERVRRKPYS 662 Query: 673 VILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGEL 732 V+LLDE+EKAH DVFN+LLQV+D+G+LTD GR V+F+NTV+I+TSN+G+ +++ + Sbjct: 663 VVLLDEIEKAHADVFNLLLQVMDEGQLTDSLGRRVNFKNTVIIITSNVGTRQLKDFGQGI 722 Query: 733 DYAHMKE----------LVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRL 782 + K+ ++ ++ F PEF+NR+D++++F LG+ I + I+LK + Sbjct: 723 GFRSEKDEEANKEHSRSVIQKALNKTFSPEFLNRLDDIILFDQLGKTEIRRMVDIELKAV 782 Query: 783 YKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGK 842 R+ GY++ ++DEA +++ GYD YGARPLKR +Q ++E+ L ILSG++ G+ Sbjct: 783 LARIHRAGYDLVLTDEAKDVIATKGYDLQYGARPLKRTLQNEVEDRLTDLILSGQIEKGQ 842 Query: 843 VIRLEVNEDRIVA 855 + L + I+ Sbjct: 843 TLTLSARDGEIIV 855 >UniRef50_A9FKV2 Endopeptidase Clp n=6 Tax=Proteobacteria RepID=A9FKV2_SORC5 Length = 901 Score = 628 bits (1620), Expect = e-178, Method: Composition-based stats. Identities = 309/897 (34%), Positives = 480/897 (53%), Gaps = 67/897 (7%) Query: 5 RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDI 64 RLT AL A + + + HL+ ALL+ ++ L++ ++ LR + Sbjct: 15 RLTKNCTSALEAAIGQCVNARHYEVTLEHLLLALLDDANSDIAFLVSHYDLDPSHLRAAL 74 Query: 65 NQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKL-AQKRGDNFISSELFVLAALESR---- 119 ++L L + G G S ++ + + + + G + S + ++ Sbjct: 75 QRSLEELRK--GNAGRPVLSPTMLEWMQDAYLVGSMEYGYQRVRSGVLFQRLVQQPTRYS 132 Query: 120 -GTLADILKAAGATTANITQAIEQMRGGES--------------------VNDQGAEDQR 158 ++ L+ G + ++ + ++ G + Sbjct: 133 VSSIGAYLE--GISKDDLKNNLPKIVSGSKEEAEAAAAAAGAGAPGAGKLPAGMASAGPD 190 Query: 159 QALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEG 218 AL K+ +D T +A G++DP+ GR+ EIR+ I +L RR KNNP+++G+ GVGKTA+VEG Sbjct: 191 SALAKFCVDYTGKARAGQIDPIFGREREIRQVIDILARRRKNNPIIVGDAGVGKTALVEG 250 Query: 219 LAQRIING-----EVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNV 273 LA I+ +VP L+G +L LDMG L AGA +GEFE R+K V+ ++ + Sbjct: 251 LALLIVESTPENPKVPPLLQGVDILGLDMGLLQAGAGVKGEFENRMKQVIAEVKGSSKPI 310 Query: 274 ILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRF 333 ILFIDE HT++GAG G DA N+LKPALARGEL + ATT EY++Y EKDAALERRF Sbjct: 311 ILFIDEAHTLIGAGGQQGGGDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALERRF 370 Query: 334 QKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDL 393 Q V V EPS + +LRGL+ ++E+ H+V I D A+ AA LS RY+ RQLPDKA+DL Sbjct: 371 QPVKVDEPSEPAAVVMLRGLRPKFEVAHNVIIQDEAVTAAVRLSARYLTGRQLPDKAVDL 430 Query: 394 IDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKER 453 +D A+ +++ + +P ++ + I+ + E +AL ++ D + E Sbjct: 431 LDTCAARVKVALQQRPSAVEDAEILIVNTETELKALERDRDRG-----------VHIDEE 479 Query: 454 QYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQL 513 + S L++ K L + A+ + AR+ D A+ SE + E+ K L Sbjct: 480 RVSALKDRLAKAKTELETVRAAYAKETAGTQRVIDARKKMDEAKTSEERDAARREVVKAL 539 Query: 514 EAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQ 573 + Q +G+ + L+R V +A +A V+A WTGIPV +M++ + + LL ME L R+ GQ Sbjct: 540 DELKQSQGE-VPLVRPDVDEAMVASVVAAWTGIPVGKMVQDDVKALLEMEDRLTRRIKGQ 598 Query: 574 NEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRID 633 + +S +R +RAGL + P G FL +GP+GVGKTE +A+ MF + M I+ Sbjct: 599 THGIVTISKELRSARAGLKPLSTPQGVFLLVGPSGVGKTETALGIADLMFGGERMMTVIN 658 Query: 634 MSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQV 693 MSEF EKH+VSRL+G+PPGYVGY EGG LTEAVR+RPY+V+LLDEVEKA PDV N+ QV Sbjct: 659 MSEFQEKHTVSRLIGSPPGYVGYGEGGMLTEAVRQRPYTVVLLDEVEKADPDVMNLFYQV 718 Query: 694 LDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE--------------RFGELDYAHMKE 739 D G L+DG+GR VDF+NTV+I+TSNL +D I + E Sbjct: 719 FDKGMLSDGEGRLVDFKNTVIILTSNLATDKITNMTVAAREEDPSRRLDADGEFIKEIVE 778 Query: 740 LVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEE-RGYEIHISDE 798 + +S +F+P + R+ V + P+ + I +++L L RL + + E SD Sbjct: 779 SIKPTLSAHFKPALLARMT-TVPYLPISPDALGEITRLKLDALVDRLRKSQRIEASYSDA 837 Query: 799 ALKLLSENGYDPVYGARPLKRAIQQQIENPLA----QQILSGELVPGKVIRLEVNED 851 ++ ++ + GAR + ++ + L+ +++ G L I ++ ++ Sbjct: 838 LVETIAARCTEVDTGARNIDHILRASLLPLLSVAVLEKMAEGPLPKRLQIGVDAEKN 894 >UniRef50_B5FRR8 Chaperone protein clpB n=19 Tax=Gammaproteobacteria RepID=B5FRR8_SALDC Length = 911 Score = 628 bits (1620), Expect = e-178, Method: Composition-based stats. Identities = 307/851 (36%), Positives = 445/851 (52%), Gaps = 35/851 (4%) Query: 5 RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDI 64 RL + AL A S + I H++ +L + A I A LR + Sbjct: 12 RLAPFAKQALEAAASECMSQQAAEITVAHVLLQMLATPRSDFRVIAERAEIGADDLRQAL 71 Query: 65 NQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQ--------KRGDNFISSELFVL--- 113 + + S LV L LA + G ++ L Sbjct: 72 T--VENYATARSSDSYPSFSPMLVEWLKEAWLLASAEMQQTELRGGVLLLALLHSPLRYL 129 Query: 114 ---AALESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTE 170 AA D+L+ A + + A+ L +Y ++T+ Sbjct: 130 PPAAARLLTAINRDLLRQDFAGWTKESAESVILNADGQTASAIADTGDTLLARYAKNMTD 189 Query: 171 RAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPE 230 A QG+LDPV+ RD EI I +L RR KNNPV++GE GVGK+A++EGLA RII G+VP+ Sbjct: 190 DARQGRLDPVLCRDNEIDLMIDILCRRRKNNPVVVGEAGVGKSALIEGLALRIIAGQVPD 249 Query: 231 GLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKAD 290 L+ ++ LD+GAL AGA +GEFE+R KG++ ++ + VILFIDE HT++GAG Sbjct: 250 KLRDTDIMTLDLGALQAGASVKGEFEKRFKGLMAEVIQSPKPVILFIDEAHTLIGAGNQQ 309 Query: 291 GAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAIL 350 G +D N+LKPALARGEL + ATT EY++Y EKD+AL RRFQ V V+EP+ + IL Sbjct: 310 GGLDISNLLKPALARGELKTIAATTWSEYKKYFEKDSALSRRFQLVKVSEPNAAEATIIL 369 Query: 351 RGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPE 410 RGL YE H V I D A+ AAATLS RY++ RQLPDKAID++D A + + + + S P Sbjct: 370 RGLSAVYEQSHGVLIDDEALQAAATLSERYLSGRQLPDKAIDVLDTACARVAINLSSPPR 429 Query: 411 ELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKER---QYSELEEEWKAEKA 467 ++ L Q + E + L +E + LNE L+ + + LE W+ ++ Sbjct: 430 QISALTTLRQQCEAEIRQLEREIRIGLRSDTSRLNEVLAQYDETLSELDALEAAWRQQQT 489 Query: 468 SLSGTQTIKAELEQAKIAI---EQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTM 524 + ++ L A E A + + PE E ++ A +L T Sbjct: 490 LVQEIIALRKGLLDETDATGNDETATPETEAVGSDDESVTAPPEAEPEISPAARLAQLTA 549 Query: 525 R---------LLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNE 575 L+ V +IA V+ WTG+P++R+ ++E + + Q L + GQ Sbjct: 550 ELDALHHTQLLVSPHVDKKQIASVITEWTGVPLNRLSQNEMSVITDLPQWLGDTIKGQAL 609 Query: 576 AVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMS 635 A+ + + +RA L P RP+G+FL GP+GVGKTE LA ++ + + I+MS Sbjct: 610 AIKHLHKHLLTARADLRRPGRPLGAFLLAGPSGVGKTETVLQLAELLYGGRQYLTTINMS 669 Query: 636 EFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLD 695 EF EKH+VSRL+G+PPGYVGY EGG LTEA+R++PYSV+LLDEVEKAHPDV N+ Q D Sbjct: 670 EFQEKHTVSRLIGSPPGYVGYGEGGVLTEAIRQKPYSVVLLDEVEKAHPDVLNLFYQAFD 729 Query: 696 DGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFIN 755 G + DG+GR +D +N V +TSNLG +I E + M+E + V++ F+P + Sbjct: 730 KGEMADGEGRLIDCKNVVFFLTSNLGYQVIVEHADNPEA--MQEALYPVLADFFKPALLA 787 Query: 756 RIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEER-GYEIHISDEALKLLSENGYDPVYGA 814 R+ EVV + PL + +A I +L RL L R G E+ I E + + GA Sbjct: 788 RM-EVVPYLPLSRETLAVIIAGKLARLDNVLRARFGAEVVIEPEVTDEIMQRVTRAENGA 846 Query: 815 RPLKRAIQQQI 825 R L+ I ++ Sbjct: 847 RMLESVIDGEM 857 >UniRef50_B5FD85 Type VI secretion ATPase, ClpV1 family n=2 Tax=Vibrio fischeri RepID=B5FD85_VIBFM Length = 860 Score = 627 bits (1617), Expect = e-178, Method: Composition-based stats. Identities = 307/864 (35%), Positives = 480/864 (55%), Gaps = 31/864 (3%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 L + LAL A L + + + A LN + ++ L + Sbjct: 13 LDKESHLALEQAAQLCVTRGGNEVLCEDFILAALNNPQSFWNKACQQYNVSTDVLIEALQ 72 Query: 66 QALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQ-KRGDNFISSELFVLAALESR---GT 121 S L+ L + + + + + +L L G Sbjct: 73 H---GRKSTSSESNHPVLSTALIEWLQESYLFSMLEMQLSEVLAANLLLTLLSHPNKYGH 129 Query: 122 LADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVI 181 + + A++ Q +E + + + Q + + + AL YT + T+ A+ K+DPV+ Sbjct: 130 TPYYRELSVIPVASLKQQVEGLVSCANRDSQSSAEHQNALDAYTTNYTQLAKDNKIDPVL 189 Query: 182 GRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALD 241 RD EIR+ I +L RR KNNP+++GE GVGKTA+VEGLA +I GEVP+ L+ +L+LD Sbjct: 190 CRDSEIRQMIDILARRRKNNPMIVGEAGVGKTALVEGLAIKIAQGEVPDILENVALLSLD 249 Query: 242 MGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKP 301 +G L AGA +GEFE RL V+ + + +ILFIDE HT++GAG G+ DA N+LKP Sbjct: 250 LGLLQAGASIKGEFERRLNLVITAVQESPTPIILFIDEAHTLIGAGGQAGSNDAANLLKP 309 Query: 302 ALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHH 361 ALARGEL +GATT EY++YIEKD AL RRFQ V V EP+V + ILRGL ERYE H Sbjct: 310 ALARGELRTIGATTWSEYKKYIEKDPALARRFQPVKVDEPNVTQAVTILRGLAERYEESH 369 Query: 362 HVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQ 421 V + D AI+AAA LS RYI+ RQLPDKAIDL+D A + +++ + +KPE L+ L I Sbjct: 370 GVYVRDDAIIAAAELSARYISGRQLPDKAIDLLDTACARVKINLKAKPESLETLLHIIAI 429 Query: 422 LKLEQQALMKES---DEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAE 478 + E ++++ + + L E+LS +LE+EW+ +K T + + Sbjct: 430 TQRELDCVLRDQQAGINIEENTITQLKEKLSQTHLDAEQLEQEWQTQKELAEALLTSRID 489 Query: 479 LEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAE 538 + Q E+ R + + ++++ A T L+ + + +AE Sbjct: 490 IAQCNDEEEKHRLICN---------------QQEIHQALSDAQHTHSLVNYETCPSLVAE 534 Query: 539 VLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPI 598 V++ WTGIP+S + + ++L ++ +L ++ GQ++AV A+ AI+ + AGL +PN P Sbjct: 535 VVSHWTGIPMSTLQRGQATQVLTIKSKLKEQIKGQDQAVIALEKAIQATAAGLNNPNSPT 594 Query: 599 GSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEE 658 G FLF+GP+GVGKT+ +A+A+ M+ ++ + I+MSEF EKH+VSRL+G+PPGYVGY E Sbjct: 595 GVFLFVGPSGVGKTQTAQAIADLMYGGEQFLTTINMSEFQEKHTVSRLIGSPPGYVGYGE 654 Query: 659 GGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTS 718 GG LTEAVR+RPYSV+LLDEVEKA ++ N+ Q+ D G DG+GR ++F+ T++IMTS Sbjct: 655 GGVLTEAVRQRPYSVVLLDEVEKADREIMNLFYQIFDKGVANDGEGREINFKQTLIIMTS 714 Query: 719 NLGSDLI---QERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIA 775 NL SD I + + + + + ++ F+P + R+ VV F PL + + ++ Sbjct: 715 NLASDQIEALCNQEEKPTTDALTKAIRPTLNQYFKPALVGRMT-VVPFFPLDMESMEALV 773 Query: 776 QIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQIL- 834 I+LK+L ++L + +H + ++ ++++ GAR + I Q++ + QIL Sbjct: 774 DIRLKQLTEQLSLQQITLHYDEAIIQHIAQSCTLTETGARNIDAIINGQLKPAFSSQILL 833 Query: 835 -SGELVPGKVIRLEVNEDRIVAVQ 857 P I L ++E+ V + Sbjct: 834 ALARKEPLTSISLCIDENGQVFCE 857 >UniRef50_A1STR4 Chaperone endopeptidase Clp ATP-binding chain B,ClpB n=3 Tax=Gammaproteobacteria RepID=A1STR4_PSYIN Length = 828 Score = 626 bits (1613), Expect = e-177, Method: Composition-based stats. Identities = 344/863 (39%), Positives = 484/863 (56%), Gaps = 72/863 (8%) Query: 5 RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL-RTD 63 + T K L A + + L+ ALL+Q +L N Sbjct: 20 KSTQKVIGCLEIAFAELGSLRLNILTSDFLLVALLSQPDSEAHKILQELLPNEDDAPLRI 79 Query: 64 INQALNRLPQVEGT-GGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESR-GT 121 + Q + P + SQ++V V + A+ GD++I + LA G Sbjct: 80 VGQIRQKYPPASNVQARQILASQEIVEVFRVAYDEAKDFGDDYIGTGTLFLAFFHKDAGH 139 Query: 122 LADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVI 181 +ADIL G QA++ +R G +N Q AE + L YT DLTE A +G+LDPVI Sbjct: 140 VADILNNEGIRVDQARQALKHIRRGHQLNSQDAEGKPDILDIYTKDLTEMARKGELDPVI 199 Query: 182 GRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALD 241 GR+EEI IQ L RR KNNP LIGEPGVGKT IVEGLAQRI+ +VP+ +R+LALD Sbjct: 200 GREEEIELIIQTLSRRKKNNPALIGEPGVGKTVIVEGLAQRIVAADVPDSQLNKRLLALD 259 Query: 242 MGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKP 301 MG LVAGA RGEFEERLK V + + + G VILFIDELHT+VGA G +DA ++LK Sbjct: 260 MGELVAGASMRGEFEERLKSVRDAVIEAGGKVILFIDELHTVVGANAGSGGIDAPSLLKT 319 Query: 302 ALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHH 361 ALA+G L +GA TLDEY++YIE D ALERRF + V EPS+E+TIAIL+G RYE HH Sbjct: 320 ALAQGTLQVIGADTLDEYQKYIETDKALERRFHPILVREPSIEETIAILQGAAPRYEKHH 379 Query: 362 HVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQ 421 + PA AAA LS RYIADR LPDKA+DLIDEA + +++ + P+ L L+R+ Sbjct: 380 DIHYALPAFEAAARLSERYIADRCLPDKAVDLIDEAGARKHLRLTAIPQNLRDLERKHQG 439 Query: 422 LKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQ 481 L ++ + E+ +++ E +W+ +A T E Sbjct: 440 LLRDKTGAFNAQNFEQV---AATQMEILKSDQKLKEARSDWQQGRAKEDAMVTSDDIAE- 495 Query: 482 AKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLA 541 + +ARM E + K+ +E++L + +R + + + + Sbjct: 496 ----VVARWTGIPVARMVESESEKLARMEEKLHQRIVGQEDAVRAVADAIRRNRAGITNS 551 Query: 542 RWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSF 601 R RPIGSF Sbjct: 552 R-----------------------------------------------------RPIGSF 558 Query: 602 LFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGY 661 LFLGPTGVGKTEL +ALA F+ D + ++R+DMSE+ME+H VS+++GAPPGY+GY EGG Sbjct: 559 LFLGPTGVGKTELARALAAFLLDDETRIIRLDMSEYMERHEVSKMIGAPPGYIGYGEGGQ 618 Query: 662 LTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLG 721 LTE VR PY+V+LLDE+EKAHPDVFN+LLQ+L+DG+LTD +GR V FRNTV+I TSNLG Sbjct: 619 LTERVRHNPYTVVLLDEMEKAHPDVFNMLLQILEDGQLTDAKGRKVSFRNTVIIGTSNLG 678 Query: 722 SDLIQE--------RFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIAS 773 + + L+Y ++LV+ V F+PEF+NR+D+++VFH L ++H+ Sbjct: 679 TGSLSPDKRPIGFIHSDSLNYKETQDLVMHEVKKFFKPEFLNRLDDIIVFHYLEKEHVRQ 738 Query: 774 IAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQI 833 IAQ+ + L +R++ RG + + + + LS +G+DP+YGARPL+R +++QIEN LA ++ Sbjct: 739 IAQMFVAELVERMKLRGIVLEVDNAVIDKLSADGFDPIYGARPLRREVERQIENVLAMKV 798 Query: 834 LSGELVPGKVIRLEVNEDRIVAV 856 + E V+++++ + IV + Sbjct: 799 VRNEFSDNSVVQVKMQDKEIVFL 821 >UniRef50_A6NVT1 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NVT1_9BACE Length = 858 Score = 626 bits (1613), Expect = e-177, Method: Composition-based stats. Identities = 330/730 (45%), Positives = 464/730 (63%), Gaps = 14/730 (1%) Query: 135 NITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVL 194 + E E N + +R+ L+ Y I LT++A +GKLD ++GRD+EI RTIQ+L Sbjct: 127 DSQPREESRPREEKNNGKERAPKRKFLENYCISLTQKAAEGKLDNIVGRDQEIERTIQIL 186 Query: 195 QRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGE 254 RR KNNP LIGEPGVGKTAI EGLA RI G+VP L+ + V LD+ ALVAG ++RG+ Sbjct: 187 NRRQKNNPCLIGEPGVGKTAIAEGLALRIHEGKVPYKLQDKEVYLLDLTALVAGTQFRGQ 246 Query: 255 FEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGAT 314 FE R+KG+++++ K GN+IL IDE+H +VGAG A+G+M+A N+LKPAL+RGE+ +GAT Sbjct: 247 FESRMKGLIDEVKK-LGNIILVIDEVHNIVGAGDAEGSMNAANILKPALSRGEIQVIGAT 305 Query: 315 TLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAA 374 TL EYR+YIEKD+ALERRFQ V V EPS+ED + I+ G+K YE +H V I+ A Sbjct: 306 TLTEYRKYIEKDSALERRFQPVIVEEPSIEDAVQIIMGIKSYYEKYHFVSISPEMARLAV 365 Query: 375 TLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESD 434 T+S RYI DR LPDKAIDLIDEA S + + + E L + + + E++AL+ E++ Sbjct: 366 TMSERYITDRYLPDKAIDLIDEACSDVNLHNANLAREAQ-LKKDLEAISKEREALVAEAN 424 Query: 435 EASKKRLDML---NEELSDKERQYSELEEEWKAEKASLSGTQTIK-AELEQAKIAIEQAR 490 KR L ++ R+ ++L E++ A+ +K E EQA++ E + Sbjct: 425 SRDFKRQSDLKANENRQAEIRRELNKLTEQYSVLSAAGDQEAGMKDNEREQARLQRELQK 484 Query: 491 RVGDLARM----SELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGI 546 V D + + + Y ++ ++ + Q K +T A +A V+ WT I Sbjct: 485 LVQDRSALNAATGDEDYQRLAVIKSRELQLQQELDKLEAQSAPPLTVAHLARVIELWTKI 544 Query: 547 PVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGP 606 P S++ E+E E+L ++E L +IGQ++AV AV+ A+RR R G+A +P+ SF+F+G Sbjct: 545 PASQIQEAEYERLAQLENRLKEHIIGQDDAVKAVAAAVRRGRVGIASKRKPV-SFIFVGS 603 Query: 607 TGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAV 666 TGVGKTEL K LA MF S E+++R+DMSEFMEK +VSR++G+PPGYVGY+E G LTE V Sbjct: 604 TGVGKTELVKRLAMDMFHSPESLIRLDMSEFMEKFAVSRIIGSPPGYVGYDEAGQLTEKV 663 Query: 667 RRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQ 726 RR+PY VIL DE+EKAHPDV NILLQ+LDDG +TD QGR V+F NTV++MTSN GS+ Sbjct: 664 RRKPYCVILFDEIEKAHPDVLNILLQILDDGHITDAQGRNVNFENTVIVMTSNAGSEAKG 723 Query: 727 E---RFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLY 783 FG +E + + RPEFINR+DE+V F+ L E++ +IA I L L Sbjct: 724 SGSVGFGRTAAEQGRERAMKALESFLRPEFINRVDEIVYFNKLSEENFKAIAGIMLGELK 783 Query: 784 KRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKV 843 L E+G D L L + Y YGAR L+R IQ+ +E+P+A +I+ L P + Sbjct: 784 GTLAEKGITFTYDDSLLDYLVKKSYSLTYGARNLRRQIQKDLEDPIATRIIESYLNPVRT 843 Query: 844 IRLEVNEDRI 853 + + + + Sbjct: 844 LHASSDGETV 853 >UniRef50_Q6TKU1 Aec27 n=39 Tax=cellular organisms RepID=Q6TKU1_ECOLX Length = 919 Score = 622 bits (1604), Expect = e-176, Method: Composition-based stats. Identities = 306/857 (35%), Positives = 445/857 (51%), Gaps = 44/857 (5%) Query: 5 RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDI 64 RL + AL A S + I H++ +L V + GI+A LR + Sbjct: 12 RLNPFAKQALEMAASECMSQQASEITVAHVLLQMLAIPRNDVRVIAERTGISAEDLRQAL 71 Query: 65 NQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQ-KRGDNFISSELFVLAALESR---- 119 + P G S L+ L LA + + + S + +L L S Sbjct: 72 T--VESYPGGRSAEGYPSFSPMLIEWLKESWLLASAQMQHSELRSGVLLLTLLHSPLRYI 129 Query: 120 -GTLADILKAAGATTAN------ITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERA 172 A +L A ++ E + + E L +Y ++T A Sbjct: 130 PPAAARLLTAINRDQLQQDFAAWTKESAESVDLAGGQTPRATETGDTLLARYAKNMTADA 189 Query: 173 EQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGL 232 G+LDPV+ R+ EI I +L RR KNNPV++GE GVGK+A++EGLA RI+ G+VP+ L Sbjct: 190 RNGRLDPVLCRNYEIDLMIDILCRRRKNNPVVVGEAGVGKSALIEGLALRIVAGQVPDKL 249 Query: 233 KGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGA 292 K ++ LD+GAL AGA +GEFE+R KG++ ++ VILFIDE HT++GAG G Sbjct: 250 KNTDIMTLDLGALQAGASVKGEFEKRFKGLMAEVIFSPVPVILFIDEAHTLIGAGNQQGG 309 Query: 293 MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRG 352 +D N+LKPALARGEL + ATT EY++Y EKDAAL RRFQ V V+EP+ + ILRG Sbjct: 310 LDISNLLKPALARGELKTIAATTWSEYKKYFEKDAALSRRFQLVKVSEPNAAEATIILRG 369 Query: 353 LKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEEL 412 L YE H V I D A+ AAATLS RY++ RQLPDKAID++D A + + + + S P+++ Sbjct: 370 LSAVYEQSHGVLIDDDALQAAATLSERYLSGRQLPDKAIDVLDTACARVAINLSSPPKQI 429 Query: 413 DRLDRRIIQLKLEQQALMKESDEASKK---RLDMLNEELSDKERQYSELEEEWKAEKASL 469 L Q + E + L +E + R+ + E+ + ELE W+ + Sbjct: 430 SALTTLSHQQEAEIRQLERELRIGLRTDTSRMTEVLEQYDETLSALDELEVAWQQQTLVQ 489 Query: 470 SGT-----------------------QTIKAELEQAKIAIEQARRVGDLARMSELQYGKI 506 + E EQ E A G + + Sbjct: 490 EIIALRQQLLGVAEDDVASLPDADAVEDTPPEAEQDSTDAESADDAGSVQPEETAETVSP 549 Query: 507 PELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQEL 566 + QL A L+ V +IA V+A WTG+P++R+ ++E + + L Sbjct: 550 VQRLAQLTAELDALHNDQLLVSPHVDKKQIAAVIAEWTGVPLNRLSQNEMSVITDLPVWL 609 Query: 567 HHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSD 626 + GQ+ A+ ++ + +RA L P RP+G+FL GP+GVGKTE LA ++ Sbjct: 610 GGTIKGQDLAIASLHKHLLTARADLRRPGRPLGAFLLAGPSGVGKTETVLQLAELLYGGR 669 Query: 627 EAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDV 686 + + I+MSEF EKH+VSRL+G+PPGYVGY EGG LTEA+R++PYSV+LLDEVEKAHPDV Sbjct: 670 QYLTTINMSEFQEKHTVSRLIGSPPGYVGYGEGGVLTEAIRQKPYSVVLLDEVEKAHPDV 729 Query: 687 FNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVS 746 N+ Q D G + DG+GR +D +N V +TSNLG +I E + + M+E + V++ Sbjct: 730 LNLFYQAFDKGEMADGEGRLIDCKNIVFFLTSNLGYQVIVEHADDPET--MQEALYPVLA 787 Query: 747 HNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEER-GYEIHISDEALKLLSE 805 F+P + R+ EVV + PL ++ +A+I +L RL L R G ++ I E + Sbjct: 788 DFFKPALLARM-EVVPYLPLSKETLATIIAGKLARLDNVLRSRFGADVIIGPEVTDEIMS 846 Query: 806 NGYDPVYGARPLKRAIQ 822 GAR L+ I Sbjct: 847 RVTRAENGARMLESVID 863 >UniRef50_Q4AAM9 ATP-dependent protease binding protein n=7 Tax=Mycoplasma RepID=Q4AAM9_MYCHJ Length = 692 Score = 621 bits (1601), Expect = e-176, Method: Composition-based stats. Identities = 318/701 (45%), Positives = 478/701 (68%), Gaps = 17/701 (2%) Query: 154 AEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKT 213 + + + L+KY +LT+ A++ K++PVIGRD+EIRR I++L R+TKNNPVL+G+PGVGKT Sbjct: 1 MKQKLENLEKYARNLTKLAKENKIEPVIGRDDEIRRIIKILSRKTKNNPVLVGDPGVGKT 60 Query: 214 AIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNV 273 AIVEG+A +II +VP+ LK +++ LD+ ++AGA ++GEFE+R+K +L ++ + V Sbjct: 61 AIVEGMALKIIANQVPDNLKNKQIFELDLTLILAGASFKGEFEKRIKAILQEIEQNSDQV 120 Query: 274 ILFIDELHTMVGAGKADG-AMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERR 332 I+FIDE+H ++G G + +MD N+LKP +ARG++ +GATT EYR YIEKD ALERR Sbjct: 121 IIFIDEIHLLIGTGSSGTDSMDFANILKPIMARGQIKLIGATTNSEYRLYIEKDGALERR 180 Query: 333 FQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAID 392 QKV + EPSV DTI ILRG+KER E H V+I D A+V A ++RYI DR LPDKAID Sbjct: 181 MQKVEILEPSVIDTINILRGIKERLENFHQVKIKDSALVFATKAANRYIFDRFLPDKAID 240 Query: 393 LIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKE 452 L+DEAA+S++++I+ +PE+L++ E L E + K+ L ++ + E Sbjct: 241 LVDEAAASLKVEINYQPEKLEKAK-------RELIYLKMEEINSQKQDNSELKSKIENLE 293 Query: 453 RQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQ 512 + +L+++W K S S ++ ELE+ K GD + +E++YGKIP++ K+ Sbjct: 294 NEVKKLQDQWDQSKKSASEIASLSQELEKLKYQQNYLMEQGDYQKAAEIKYGKIPKISKK 353 Query: 513 LEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIG 572 L + + N + +++IA+V++ WT IP+ +++ESE +K L +E+ L + G Sbjct: 354 LGEIKARRQE----ISNVLDESQIAKVVSNWTKIPIEKLLESEIQKYLNLEKNLAKSLKG 409 Query: 573 QNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRI 632 QN+A+ AVS+AI R +A + D +RPI SF F+GPTGVGKTEL +ALA +F++ ++R+ Sbjct: 410 QNQAIKAVSDAILRFKAKINDESRPISSFFFMGPTGVGKTELARALALNLFNNKNQIIRL 469 Query: 633 DMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQ 692 DMSE+MEKHSVS+L+GAPPGY+G+E+GG LT VR PYS+ILLDE+EKAHP+V NI LQ Sbjct: 470 DMSEYMEKHSVSKLIGAPPGYIGFEQGGNLTNKVRLNPYSIILLDEIEKAHPEVINIFLQ 529 Query: 693 VLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPE 752 +LD+G + D + + V+FRNT++IMTSN+G++ I E + KE + +PE Sbjct: 530 ILDNGEIVDSKSQKVNFRNTIIIMTSNIGANKILEGKKMNEIEAKKE-----LLRYLKPE 584 Query: 753 FINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVY 812 F+NRIDE++VF+PL I I +++LK L RL+E +EI + E GYD + Sbjct: 585 FLNRIDEIIVFNPLNYDIIFEIIELELKDLQNRLKENNFEIEFEKSVKNWILEFGYDKNF 644 Query: 813 GARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRI 853 GARP+KR I+++IEN +A++I++ E++ K L D++ Sbjct: 645 GARPIKRFIKKEIENFVAKKIVAEEILKDKKYNLSFKNDKL 685 >UniRef50_A0K1M3 ATPase AAA-2 domain protein n=6 Tax=Bacteria RepID=A0K1M3_ARTS2 Length = 857 Score = 621 bits (1600), Expect = e-176, Method: Composition-based stats. Identities = 332/874 (37%), Positives = 470/874 (53%), Gaps = 92/874 (10%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 L+ + L+ A A+ + ++ LH++ + E + + AG + + Sbjct: 41 LSRRTHEVLSLAGQFAVDLGHGDVDALHILRTMAGAE--PATSYMRRAGADPAAVARAAE 98 Query: 66 QALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAA-LESRGTLAD 124 + L T + R L ++A+ G +I E A L Sbjct: 99 ERLPEKSGRAATSA-PALTPSAQRALLDAYQVARAFGSTYIDPEHLFFALVLNQDAPAGQ 157 Query: 125 ILKAAGATTANITQAIEQMRGGESVND-----------QGAEDQRQALKKYTIDLTERAE 173 +L AAG T + + G E G L Y DLT A Sbjct: 158 VLAAAGVTPESFQAGARETSGTEPSGAGAPDAAASASGTGTAAATPMLDTYGTDLTALAR 217 Query: 174 QGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLK 233 G LDPVIGR +E +TI+VL RRTKNNPVLIGE GVGKTAIVEGLAQ I G VPE L+ Sbjct: 218 SGGLDPVIGRSDETAQTIEVLARRTKNNPVLIGEAGVGKTAIVEGLAQAIAAGTVPEQLR 277 Query: 234 GRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMV-GAGKADGA 292 +RV++LD+ A++AG +YRG+FEERL ++++ G ILFIDELHT++ G +G Sbjct: 278 NKRVISLDLPAMLAGTRYRGDFEERLTKAMDEVTANPGQFILFIDELHTVIGAGGAGEGG 337 Query: 293 MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRG 352 MDAGN+LKP LARGELH VGATT +EYR+ EKD A ERRFQ V V EP+VED + IL G Sbjct: 338 MDAGNILKPRLARGELHVVGATTFNEYRKV-EKDPAFERRFQPVQVGEPAVEDAVQILSG 396 Query: 353 LKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEEL 412 L+ERYE HH V+ TD A+ AA LS RY+ DR LPDKAIDL+D+A + + +++ S+ ++ Sbjct: 397 LRERYEEHHGVRYTDEAVRAAVELSARYVTDRFLPDKAIDLMDQAGARLSLKLGSR-QDA 455 Query: 413 DRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGT 472 L R++ L+ + A + D + RL + + L+E+ AS G Sbjct: 456 AALRERLVALEESKTAAIAAEDFEAASRLRD----------EANALKEKLDGGAASQEGP 505 Query: 473 QTIKAELEQAKIAIEQARRVG-DLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKV 531 + A + +A+IA +R G +R++E ++ LE+ L + + L+ V Sbjct: 506 GSESAVVGEAEIAEIISRATGIPASRITEGDRERLARLEEDLHQRVVGQEDAVSLIAKSV 565 Query: 532 TDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGL 591 G A + + + G+ Sbjct: 566 RRNRT-----------------------------------GMGAAGRPIGSFLFLGPTGV 590 Query: 592 ADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPP 651 KTEL KALA +F S+++M+R DMSEF E+H+VSRLVGAPP Sbjct: 591 G------------------KTELAKALAGSLFGSEDSMIRFDMSEFGERHTVSRLVGAPP 632 Query: 652 GYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRN 711 GYVGY+E G LTE VRR PYS++LLDEVEKAHPDVFN+LLQVLDDGRLTDG GRTVDFRN Sbjct: 633 GYVGYDEAGQLTERVRRNPYSIVLLDEVEKAHPDVFNLLLQVLDDGRLTDGHGRTVDFRN 692 Query: 712 TVVIMTSNLGSDLIQERFGELDY----------AHMKELVLGVVSHNFRPEFINRIDEVV 761 TVVIMTSNLGS+ + + G + +++ VL + + RPEF+NRIDE+V Sbjct: 693 TVVIMTSNLGSEFLASKAGPTGFTAAGDAFGSEKALRDRVLARLRESMRPEFLNRIDEIV 752 Query: 762 VFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAI 821 +F L + I ++ L RL +G + +S++A+ ++E GY+P YGARP++R I Sbjct: 753 LFRKLDRAQLRQIVRLMLDETDARLRSQGIGLVVSEDAVDWIAERGYEPEYGARPMRRVI 812 Query: 822 QQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855 Q+++++ +A ++ L G + + + +V Sbjct: 813 QRELDDRIADLLVGSGLAAGGQVTVSADGPELVV 846 >UniRef50_C4GNT2 ClpB protein n=23 Tax=Yersinia RepID=C4GNT2_YERPN Length = 867 Score = 618 bits (1594), Expect = e-175, Method: Composition-based stats. Identities = 298/879 (33%), Positives = 466/879 (53%), Gaps = 57/879 (6%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +RL +A L + ++++E H + L++Q+ G + LLT G++ + T Sbjct: 13 FNRLGTFAYKTFVEATRLCRSYRHEYVELEHWLKILMDQQRGDIPALLTHYGLSQTVIST 72 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNF-ISSELFVLAALESRGT 121 +++ + +P + + D S L V+ L+Q I + +LA L+ Sbjct: 73 QLDRIIQHMPVTKASVQD--LSSRLESVVEGGLVLSQLMASPSPIRTSHILLALLQDTQH 130 Query: 122 LADIL----------------KAAGATTANITQAIEQMRGG---ESVNDQGAEDQRQALK 162 + + G +I Q E RG + +++ AL Sbjct: 131 QRWLYRLCDEFKKLPVPQVAEEYEGLLVNSIEQTSEVQRGDALVTETDSSSSKEAHAALN 190 Query: 163 KYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQR 222 K+ DLT++A G++DPVIGR+ E+R+ I +L RR +NNP+L+GE GVGKTA+VE LA++ Sbjct: 191 KWCNDLTQQARDGEIDPVIGREAELRQVIDILLRRRQNNPILVGEAGVGKTAVVEALARK 250 Query: 223 IINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHT 282 + +G+VP L+G R+L+LD+G + AGA RGEFE RLK +++ +++ + VILF DE HT Sbjct: 251 LASGDVPPLLQGARLLSLDLGRMQAGASMRGEFESRLKSLIDGISQSDTPVILFCDEAHT 310 Query: 283 MVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPS 342 +VGAG G DA N+LKP LARG L + ATT EY+Q+IE DAAL RRFQ+V + EP+ Sbjct: 311 LVGAGGQAGTGDAVNLLKPMLARGALRMIAATTWSEYKQFIEPDAALTRRFQRVLIGEPN 370 Query: 343 VEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIR 402 + +LR + + HH+V I D AI AA LS R + RQLPDKAI L+D A + + Sbjct: 371 ESTAVDMLRAIAPHFAQHHNVTIRDGAIHAAVRLSLRNLPSRQLPDKAISLLDTACARVA 430 Query: 403 MQIDSKPEELDRLDRRIIQLKLEQQAL--MKESDEASKKRLDMLNEELSDKERQYSELEE 460 + ++P+ +++L ++ LK E Q L K+ EA +RLD + ++ E + + L+ Sbjct: 431 LSQYAQPQAIEQLSAQLDVLKTEHQYLVREKQLGEAVDQRLDDVQTQIQAFEHELTALQS 490 Query: 461 EWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLE 520 E+ + + + E E + + E AR Sbjct: 491 RHLHEQQLV---REVLPEGEGSGMMTENARWGE-----------------------LMAL 524 Query: 521 GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAV 580 + L+ V + IA VL+ WTGIP +M++ + E +L +EQ L + GQ A+ + Sbjct: 525 QEASPLVYPWVDEQSIAAVLSDWTGIPSGKMLQDDIECVLNLEQRLGDHIFGQRNAIKEI 584 Query: 581 SNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEK 640 S AIR +RAG+ RP+G FL G TG GKTE L ++ ++ +MSEF E Sbjct: 585 SQAIRIARAGIQSQERPLGIFLLAGSTGTGKTETANVLVETLYGGAHNLITFNMSEFQEA 644 Query: 641 HSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLT 700 H++S L GAPPGYVGY +GG LTEAVRR+PYSVILLDE +KAH D+ + QV D G + Sbjct: 645 HTLSTLKGAPPGYVGYGKGGKLTEAVRRKPYSVILLDEFDKAHADIQDAFYQVFDKGWME 704 Query: 701 DGQGRTVDFRNTVVIMTSNLGSDLIQER---FGELDYAHMKELVLGVVSHNFRPEFINRI 757 D +GR V FR +++T N G++ I++ ++ +K LV + F P + R+ Sbjct: 705 DAEGRRVSFRQCFILLTCNQGAEEIEQAYLTANDIKPGALKPLVYDALLRRFAPALLARV 764 Query: 758 DEVVVFHPLGEQHIASIAQIQLKRLYKRL-EERGYEIHISDEALKLLSENGYDPVYGARP 816 + ++ + PL + +A IA L RL RL +E G + + ++ R Sbjct: 765 N-IIPYIPLDQDALAQIASHHLARLQTRLWDEIGATLVTEGDIPGWIASRVCSHPNHGRA 823 Query: 817 LKRAIQQQIENPLAQQILS--GELVPGKVIRLEVNEDRI 853 ++ ++Q + + ++L E P + IRL V E + Sbjct: 824 VEELLRQTLLPAVGNEVLKRRHEAEPLREIRLIVEETEL 862 >UniRef50_B6EJ73 Chaperone ClpB n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6EJ73_ALISL Length = 872 Score = 618 bits (1593), Expect = e-175, Method: Composition-based stats. Identities = 303/864 (35%), Positives = 484/864 (56%), Gaps = 31/864 (3%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 L + LAL A L + + + A LN + ++ L + Sbjct: 13 LDKESHLALEQAAQLCVTRGGHEVLCEDFILAALNNPQSFWNKACIQYEVSTENLIEALQ 72 Query: 66 QALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQ-KRGDNFI---SSELFVLAALESRGT 121 R + + + S L+ L + + + I + L +LA G Sbjct: 73 H--GRQSRSSES-NNPVISTALIEWLQESYLYSMLEMKLSEILSANLLLTLLAHPNKYGH 129 Query: 122 LADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVI 181 + + ++ Q +E + + N + + AL YT + T+ A+ K+DPV+ Sbjct: 130 TPYYRELSVIPLTDLKQQVEGLINSVTENKTVNHEHQDALSAYTTNYTQLAKDNKIDPVL 189 Query: 182 GRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALD 241 RD EIR+ I +L RR KNNP+++GE GVGKTA+VEGLA +I GEVP+ L+ +L+LD Sbjct: 190 CRDSEIRQMIDILARRRKNNPMIVGEAGVGKTALVEGLAIKIAQGEVPDILENVSLLSLD 249 Query: 242 MGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKP 301 +G L AGA +GEFE RL V+ + + +ILFIDE HT++GAG G+ DA N+LKP Sbjct: 250 LGLLQAGASIKGEFERRLNLVIKAVQQSLTPIILFIDEAHTLIGAGGQAGSNDAANLLKP 309 Query: 302 ALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHH 361 ALARGEL +GATT EY++YIEKD AL RRFQ + V EP+V I ILRGL ++YE H Sbjct: 310 ALARGELRTIGATTWSEYKKYIEKDPALARRFQPIKVDEPTVSQAITILRGLADKYEESH 369 Query: 362 HVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQ 421 V + D AIVAAA LS RYI RQLPDKAIDL+D A + +++ + +KP+ L+ L I Sbjct: 370 GVYVRDDAIVAAAELSARYITGRQLPDKAIDLLDTACARVKINLKAKPQPLEALFHIIAI 429 Query: 422 LKLEQQALMKESDEA---SKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAE 478 + E ++++ +K + L +L + + + LE +W +K T + Sbjct: 430 TQRELNCVLRDKQAGIHIDEKHIYDLENKLQETQSKAQHLEHDWLNQKELAEALLTSRIN 489 Query: 479 LEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAE 538 + Q + E ++ ++K+ A L+ + + +AE Sbjct: 490 VAQCDDSQE---------------CEQLLSIQKETYHALMKAQSNQVLVSYETCPSLVAE 534 Query: 539 VLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPI 598 V++ WTGIP+S ++ + ++L + +L ++ GQ++A+ A+ AI+ + AGL +PN P Sbjct: 535 VISHWTGIPMSTLLRGQASQVLTLHTQLKQQIKGQDQAIIALQKAIQATAAGLNNPNAPT 594 Query: 599 GSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEE 658 G FLF+GP+GVGKT+ A+A+ M+ ++ + I+MSEF EKH+VSRL+G+PPGYVGY E Sbjct: 595 GVFLFVGPSGVGKTQTALAIADLMYGGEQFLTTINMSEFQEKHTVSRLIGSPPGYVGYGE 654 Query: 659 GGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTS 718 GG LTEAVR+RPYSVILLDEVEKA +V N+ QV D G + DG+GR ++F+ T++IMTS Sbjct: 655 GGVLTEAVRQRPYSVILLDEVEKADSEVMNLFYQVFDKGVVNDGEGREINFKQTLIIMTS 714 Query: 719 NLGSDLIQERFGELDYAHMK---ELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIA 775 NL S+ I+ + + ++ + + +++ F+P + R++ +V F+PL + + ++ Sbjct: 715 NLASEHIESLCNQDELPSVESLTKAIRPILNQYFKPALVARMN-IVPFYPLDLESMEALV 773 Query: 776 QIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQIL- 834 I++++L ++L+++ ++ + ++++ GAR + I Q++ + QIL Sbjct: 774 DIRMQQLSQQLQKQRIALYYDAHIISHIAKSCTLTETGARNIDAIINGQLKPAFSSQILL 833 Query: 835 -SGELVPGKVIRLEVNEDRIVAVQ 857 + P K I + ++ED V Q Sbjct: 834 ALAQKEPLKAISVNIDEDGQVYCQ 857 >UniRef50_C5ZYU5 ATP-dependent Clp protease subunit n=2 Tax=Proteobacteria RepID=C5ZYU5_9HELI Length = 876 Score = 618 bits (1593), Expect = e-175, Method: Composition-based stats. Identities = 300/876 (34%), Positives = 470/876 (53%), Gaps = 43/876 (4%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +L+ AL A L N ++E H ++ L+ +E S ++ ++ ++ Sbjct: 10 FSKLSKISYQALESATILCKNRGNSYVELAHWINQLMLEENTDCSYIVDFFELDKNKITK 69 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGD-NFISSELFVLAALESRGT 121 D+ L++LP+ + D S D+ + ++ D + I S +LA ++ Sbjct: 70 DLISYLDKLPKGSSSIED--FSNDIELAIKEAWMISSIVFDFDKIRSGSLLLALKQNSNL 127 Query: 122 LADIL----------------KAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYT 165 ++ + K T ++ + + L YT Sbjct: 128 ISKLHDMSHEFIKINADVLQDKFKEITKGSVEVNESYSNVSNATKSDPNLNNNDVLSLYT 187 Query: 166 IDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIIN 225 IDLT++A++GK+D ++GRD+EIR+ I +L RR +NNP+L GE GVGKTAI EGLA R+ Sbjct: 188 IDLTQKAKEGKIDEIVGRDKEIRQAIDILIRRRQNNPILTGEAGVGKTAIAEGLAVRLAK 247 Query: 226 GEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVG 285 EVP LKG + +LD+G L AGA +GEFEERLK V+ + +ILFIDE HT++G Sbjct: 248 NEVPSILKGYVLRSLDIGLLQAGASMKGEFEERLKKVIEAVQNSSTPIILFIDEAHTLIG 307 Query: 286 AGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVED 345 AG G DA N+LKPALARGEL C+ ATT EY +Y EKD AL RRFQ + V EP E Sbjct: 308 AGGTAGQNDAANLLKPALARGELRCLAATTWQEYIKYFEKDPALSRRFQNISVEEPDDEK 367 Query: 346 TIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQI 405 I ++R + + E HHV IT+ AI+A+ LS RY+ R+LPDK+ ++D A++ + + Sbjct: 368 CIQMMRSIAKSLEKFHHVTITNEAIIASVKLSRRYLPSRKLPDKSTSILDTASARVALSQ 427 Query: 406 DSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRL--DMLNEELSDKERQYSELEEEWK 463 S PE L+ L ++I +LE++ L++E E +++ EL E++ LE ++ Sbjct: 428 SSMPESLEILIKKIESKQLEKEILLREEREGIDHSESLKLIDMELVKLEQEKQSLEAKFD 487 Query: 464 AEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKT 523 EK ++ + ++ +L L E + K E Sbjct: 488 KEKEAIQEYKELRTKL---------------LNEQDENELEKFKEKLNDSRGKIAQIQGE 532 Query: 524 MRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNA 583 ++ V IA +++ WTGIP+ RM++ E + +L +E+EL +IGQN ++ ++ + Sbjct: 533 NPMILPVVDAQAIAAIISEWTGIPLGRMIKDEAKSILALEEELAKNIIGQNHSLSLIAKS 592 Query: 584 IRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSV 643 I ++A LADP +P F+ GP+GVGKTE ++A ++ S + ++ I+MSEF E H+V Sbjct: 593 IITAKANLADPQKPQAIFMLAGPSGVGKTETALSIAQMVYGSRDNIITINMSEFQEAHTV 652 Query: 644 SRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQ 703 S L GAPPGYVGY EGG LTEAVR++PYSVILLDE+EKAH D+ I QV D GR+ DG Sbjct: 653 STLKGAPPGYVGYGEGGVLTEAVRKKPYSVILLDEIEKAHHDIHEIFFQVFDKGRMEDGA 712 Query: 704 GRTVDFRNTVVIMTSNLGSDLIQERFGELDYAH---MKELVLGVVSHNFRPEFINRIDEV 760 GR VDFRNT++I+T+N+G I + + +Y ++ + V+ F + R+ V Sbjct: 713 GRLVDFRNTIIILTTNVGDSEIFDLCEDGNYPKPEILERAIRPVMQKVFPAALLGRL-VV 771 Query: 761 VVFHPLGEQHIASIAQIQLKRLYKRLEE-RGYEIHISDEALKLLSENGYDPVYGARPLKR 819 V ++PL ++ + I ++L+++ +R++E E + + GAR + Sbjct: 772 VPYYPLNKEALHKIIDLKLQKIIQRIQEYYKAEFAYDVSLKDEIMTRCNNIASGARMIDA 831 Query: 820 AIQQQIENPLAQQILSGEL--VPGKVIRLEVNEDRI 853 I +I ++ + L L + LEV I Sbjct: 832 IINNEILPNISIKFLQNNLETKKISKVFLEVKNGEI 867 >UniRef50_C1SG60 ATPase with chaperone activity, ATP-binding subunit n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SG60_9BACT Length = 802 Score = 616 bits (1587), Expect = e-174, Method: Composition-based stats. Identities = 298/866 (34%), Positives = 467/866 (53%), Gaps = 77/866 (8%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 + T++ + + A+ + I+ H++ LL + G + + + GI+ L Sbjct: 1 MFELFTDRARRVILFAREASERLMQTSIDTEHILLGLLRERSGLAAEIFSRRGIDVSMLM 60 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESR-G 120 D+ ++ G + SQ+ VL+ + A+ + ++++E +L L+ + G Sbjct: 61 NDVKG-VSEKGHNLMIKGSLPFSQNGKNVLDFSVEEAKNLKNKYVNTEHILLGLLKEKKG 119 Query: 121 TLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPV 180 + +L G + + I+ + + N A L ++ DLT+ A GKLDPV Sbjct: 120 KASMLLSKLGFDLVTLREEIQTVSKSYAKNTDQAVT--PTLDEFGRDLTKLAMDGKLDPV 177 Query: 181 IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL 240 IGR EI R IQ+L RR KNN V+IGEPGVGKTAIVEGLA ++ + +VP+ L+ +R+ +L Sbjct: 178 IGRSTEITRLIQILGRRIKNNAVIIGEPGVGKTAIVEGLALKMASEDVPDFLRNKRLFSL 237 Query: 241 DMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLK 300 ++G +VAG KYRG+FEER+K ++ ++ + +GNVI+FIDE+HT+VGAG A+G++DA NMLK Sbjct: 238 ELGNVVAGTKYRGQFEERMKNLIKEI-ETDGNVIIFIDEIHTIVGAGAAEGSIDASNMLK 296 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELH 360 PALARG C+GATTL E+R+ EKD AL RRFQ + V +P ++T+ IL G+K YE Sbjct: 297 PALARGVFQCIGATTLSEFRKNFEKDGALNRRFQTISVDQPDADETVQILDGIKRFYEDF 356 Query: 361 HHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRII 420 H V I + L+ RYI ++ PDK+ID++DEA S +++ + P+++ R+ ++ Sbjct: 357 HKVFIPHDVLEEITRLTDRYITEKFQPDKSIDVLDEACSRLKLATRTMPDDMVRIKNKLE 416 Query: 421 QLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELE 480 QLK R + L D ++YS+ E W + + + +L+ Sbjct: 417 QLK--------------GLRDEKLRANDYDNIQKYSKDVERWATKLSVAQKEWEEELDLD 462 Query: 481 QAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVL 540 + IE ++ + + +L+ A K Sbjct: 463 WPTLTIENI-----SEVVAHMTGVPVQKLQTDDMARIANIDKD----------------- 500 Query: 541 ARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGS 600 I + + E + + + + G + + + I G+ Sbjct: 501 -----IKEFIIGQDEA--VDALSRSVKRSFAGLSNPARPLGSFIFMGPTGVGK------- 546 Query: 601 FLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG 660 TE+ K LA +F S+ +++RIDM+E+ME+ + SRL+GAPPGYVGYEEGG Sbjct: 547 -----------TEVAKKLAETVFGSESSLIRIDMTEYMERFNSSRLIGAPPGYVGYEEGG 595 Query: 661 YLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSN- 719 LTE VRR+PYSV+L DE+EKAHP+V NILLQ+LDDG + D G V+F+NT++IMTSN Sbjct: 596 KLTEQVRRKPYSVVLFDEIEKAHPEVLNILLQILDDGHINDSLGHKVNFKNTIIIMTSNL 655 Query: 720 ----------LGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQ 769 LG D +E E+DY + F PEFINR+D +VVF PLG+ Sbjct: 656 GTKLSMNRKTLGFDTKEESNNEIDYDVFSTNAHRELKDRFPPEFINRVDSLVVFKPLGKA 715 Query: 770 HIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPL 829 + I +QL + KRLE G ++ I + + L Y+ YGARP+KR +Q +IE+PL Sbjct: 716 ELIEIIDLQLIEINKRLEIAGKQLTIDQDVKEHLLSGEYEYSYGARPIKRLLQSKIEDPL 775 Query: 830 AQQILSGELVPGKVIRLEVNEDRIVA 855 ++ +L G+ K +++++ D IV Sbjct: 776 SEILLEGKFAKRKNLKVKMINDEIVF 801 >UniRef50_D1PA52 Negative regulator of genetic competence n=1 Tax=Prevotella copri DSM 18205 RepID=D1PA52_9BACT Length = 892 Score = 614 bits (1584), Expect = e-174, Method: Composition-based stats. Identities = 307/865 (35%), Positives = 461/865 (53%), Gaps = 84/865 (9%) Query: 6 LTNKFQLALADAQSLALGHDNQ-FIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDI 64 + + D+ A +++ +EP HL+ A+L + V+ L+ G++ + + Sbjct: 86 FSQITDSIIRDSIREANNYEHSKIVEPRHLLLAILRNDKNPVANWLSQLGLSYDRAIEML 145 Query: 65 NQALNRLPQVEGTGGDVQPSQDL-VRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLA 123 Q D + + D+ + + A + Sbjct: 146 YPTDKDEEQKTEEPKDFKMEPQTPDSEIPDADRQEEAENLEMAGG----IEAEDDYNEQN 201 Query: 124 DILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGR 183 D+++ + + K++ DLT+ A +GKLDPV+GR Sbjct: 202 DMMETDEEPFDMEKDQNPMRLSTRPNGTPRKKSSTPTIDKFSFDLTKAAAEGKLDPVVGR 261 Query: 184 DEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMG 243 ++EI+R +++L RR KNNPVLIGEPGVGK+AIVEGLAQ I N E +R+++LD+ Sbjct: 262 EKEIQRVLEILGRRKKNNPVLIGEPGVGKSAIVEGLAQLINNQETSPMFFNKRLVSLDLT 321 Query: 244 ALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPAL 303 A+VAG K+RG+FEER+K V+ +L +I+FIDE+HTM+GAG +G+MDA N+LKPAL Sbjct: 322 AIVAGTKFRGQFEERIKNVIKELENHP-EIIIFIDEIHTMIGAGSGEGSMDAANILKPAL 380 Query: 304 ARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHV 363 ARG + C+GATTLDEYR+ IEKD ALERRFQKV V + E+T+ IL +K+ YE HH V Sbjct: 381 ARGIIQCIGATTLDEYRKSIEKDGALERRFQKVLVEPTTREETLLILHNIKQHYEKHHCV 440 Query: 364 QITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLK 423 + TD A+ A L+ RYI DR PDKAID+IDEA S + + S P +L++ + ++ Sbjct: 441 RYTDEALEACVKLTERYITDRHFPDKAIDVIDEAGSRVHINNASVPAPYIKLEKELKKII 500 Query: 424 LEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAK 483 ++Q + + ++ E++ +++ +W+ + Sbjct: 501 SKKQQAVANQNFEMAASCRDAQTKI---EKEIEDMKAQWQQ-----GEIGEYVEVTAEDI 552 Query: 484 IAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARW 543 + RM+E + ++ +LE L+ + + + + Sbjct: 553 ANVISMMTGVPAQRMAEGESKRLKDLEHNLKHKVIAQDNAINKMVKTI------------ 600 Query: 544 TGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLF 603 R+R GL DPN PIG F+F Sbjct: 601 -----------------------------------------LRNRVGLRDPNHPIGVFMF 619 Query: 604 LGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLT 663 LGPTGVGKT L + LA MF S ++++RIDMSEF E + SRLVGAPPGYVGY EGG LT Sbjct: 620 LGPTGVGKTYLAQKLAEEMFGSKDSLIRIDMSEFSESFNTSRLVGAPPGYVGYNEGGQLT 679 Query: 664 EAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSD 723 E VRR+PYS++LLDE+EKA+ VFN+LLQVLD+GRLTDG GR +DFRNT++IMTSN G+ Sbjct: 680 EKVRRKPYSIVLLDEIEKANSKVFNLLLQVLDEGRLTDGNGRLIDFRNTIIIMTSNAGTR 739 Query: 724 LIQE----------------RFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLG 767 +++ E D + + +V +S F PEF+NR+D+++ F L Sbjct: 740 QLKDFGRGVGFTSAGIKGGLAMDEKDKEYARSIVQKSLSKQFAPEFLNRLDDIITFDQLD 799 Query: 768 EQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIEN 827 I I + L+ L KR+EE G+ I+++A +++++ GYD +GARPL+RAIQ IE+ Sbjct: 800 LNAIKRIIDLDLEGLVKRIEELGFHFQITEKAKEMVAKKGYDVQFGARPLRRAIQTYIED 859 Query: 828 PLAQQILSGELVPGKVIRLEVNEDR 852 + + +L G + PG I + N + Sbjct: 860 SVCEMLLDGTMKPGDTISVGKNSKK 884 Score = 65.6 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 57/162 (35%), Gaps = 8/162 (4%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQ-- 59 ++ ++ Q L + A + I HLM +L++Q V+ LL A I+ Sbjct: 1 MINPFSHI-QDILKRSSKEAARTMGREISVEHLMLSLISQNDSDVNKLLKGADISPMAFS 59 Query: 60 --LRTDINQALNRLPQ-VEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFI-SSELFVLAA 115 L + + + + P + SQ ++ + A + I +LA Sbjct: 60 GVLNSKLEKRVEETPADNVKENTHIPFSQITDSIIRDSIREANNYEHSKIVEPRHLLLAI 119 Query: 116 LESR-GTLADILKAAGATTANITQAIEQMRGGESVNDQGAED 156 L + +A+ L G + + + E + +D Sbjct: 120 LRNDKNPVANWLSQLGLSYDRAIEMLYPTDKDEEQKTEEPKD 161 >UniRef50_Q7CUP5 ATP-dependent Clp protease, ATP-binding subunit n=5 Tax=Alphaproteobacteria RepID=Q7CUP5_AGRT5 Length = 892 Score = 614 bits (1582), Expect = e-174, Method: Composition-based stats. Identities = 304/873 (34%), Positives = 463/873 (53%), Gaps = 54/873 (6%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 L ++ L A S+A+ +++++ H + A++ + G + I L+ +I Sbjct: 13 LEPDLRVTLEAAASVAVRMGHRYVDIPHWLLAVV--DAGIYAETFDELKIPLPVLKAEIG 70 Query: 66 QALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQ-KRGDNFISSELFVLAALESRGTLAD 124 ++L + G G + SQ+++ LA + G + ++ +LA E + Sbjct: 71 RSLEE--AIIGDGEALSLSQNILTAAREAWILASLEAGRDRVTLCDLLLAMDEETSLRSF 128 Query: 125 ILKAAGATTANITQAIEQMRGGES----------------VNDQGAEDQRQALKKYTIDL 168 + A + A A+E++R A Q L+ YT D+ Sbjct: 129 VRSAFPSLKAMDRGALERLRSSAENGAGVDVPSALTSSGEAGSAQAAGQNDFLRLYTHDM 188 Query: 169 TERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEV 228 T A GK+DPVIGRD+E+R+ + +L RR +NNP+L+GE GVGKTA+ E LA I +G V Sbjct: 189 TTDARNGKVDPVIGRDDELRQLVDILTRRRQNNPILVGEAGVGKTAVAEALALEIASGNV 248 Query: 229 PEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGK 288 PE L+ +L LD+ L AGA +GEFE RL GV++ + + VILFIDE H +VGAG Sbjct: 249 PEKLRNVCLLNLDISLLQAGAGVKGEFERRLHGVIDAVKRSAEPVILFIDEAHGLVGAGG 308 Query: 289 ADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIA 348 A G DA N+LKPALARGE+ V ATT EY++Y EKDAAL RRFQ V V EP I Sbjct: 309 AAGQGDAANILKPALARGEVRTVAATTWSEYKKYFEKDAALTRRFQPVHVREPDEATAIR 368 Query: 349 ILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSK 408 +LRG+ + + HH+V + D AIVAA LS RY+ RQLPDKA+ L+D AA+++ + + Sbjct: 369 MLRGVADTFVSHHNVTVRDEAIVAAVQLSARYMPARQLPDKAVSLLDTAAAAVSLARQTL 428 Query: 409 PEELDRLDRRIIQLKLEQQ-ALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKA 467 PE L ++ L E L + DE + R+ + +EL E +L + AE A Sbjct: 429 PERLRAMESERHLLSDELNWLLREPQDEDMQNRIQSIRDELERLEAGIDDLRGRYDAEMA 488 Query: 468 SLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLL 527 L+ + + A RL+ Sbjct: 489 ELAALSEEQP------------------------AETGASNVSHLRPATEMRPANAERLV 524 Query: 528 RNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRS 587 V IA V++RWTGIP+ +++ + E ++ + RV+GQ+ A+ +++A+R + Sbjct: 525 PTVVDREAIAAVVSRWTGIPLGKLLADQIESARTLDVRMRQRVVGQDAAITRIADAMRTA 584 Query: 588 RAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLV 647 RAGL+DP RP F +G +G GKTE +LA+ ++ + + I+MSEF E+H VS L+ Sbjct: 585 RAGLSDPRRPPAVFFLVGMSGTGKTETALSLADLLYGGNSHLTTINMSEFKEEHKVSLLL 644 Query: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTV 707 G+PPGYVG+ EGG LTEAVRRRP+ V+LLDE++KAHP V +I QV D G L DG+GR V Sbjct: 645 GSPPGYVGFGEGGVLTEAVRRRPFGVLLLDEIDKAHPGVQDIFYQVFDKGVLRDGEGRDV 704 Query: 708 DFRNTVVIMTSNLGSDLIQERFGELDYAHMKEL----VLGVVSHNFRPEFINRIDEVVVF 763 DF+NT + MT+N GS+L+ + D E ++ ++ F+P F+ R ++ F Sbjct: 705 DFKNTTIFMTANTGSELLSALSADPDTMPEGEALEALLMPELTKQFKPAFLGR-TIILPF 763 Query: 764 HPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQ 822 PLG + +AS+ +Q+ ++ R L G ++ +SD A L GAR ++ I Sbjct: 764 MPLGAEELASVVDMQIGKIRDRVLATYGTDLRLSDAARDALVARAGASEIGARAIEIMIG 823 Query: 823 QQIENPLAQQILSGELVPGK--VIRLEVNEDRI 853 + + PL+ L + + I ++ E+ Sbjct: 824 KDLLPPLSSFFLEKVIAGERVGKIVVDFGENGF 856 >UniRef50_C4I651 Type VI secretion ATPase, ClpV1 family n=52 Tax=Proteobacteria RepID=C4I651_BURPS Length = 979 Score = 614 bits (1582), Expect = e-174, Method: Composition-based stats. Identities = 306/939 (32%), Positives = 450/939 (47%), Gaps = 95/939 (10%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +L A+ A N ++E +H + LL Q + ++ AGI L Sbjct: 9 FGKLGATLFRAIESATVFCKLRGNPYVELVHWLQQLLQQSDSDLHRIVRHAGIERDALDR 68 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQ-KRGDNFISSELFVLAALESRGT 121 DI +AL LP G+ D S + + LA + GD I V A +++ Sbjct: 69 DIARALAALPAGAGSISD--FSHHVETAIERAWVLATLRFGDRRIRGAWLVAALVDTPEL 126 Query: 122 LADILKAAGA--------------------TTANITQAIEQMRG-----GESVNDQGAED 156 +L + A + + + GE A Sbjct: 127 RRVLLSISPAFARIPHDDALDDVLPAWTAGSPEAADAPYDHVDSAPASPGEPSGATRAAP 186 Query: 157 QRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIV 216 L++Y DLT RA G +DPVIGR+ EIR VL RR +NNP+L GE GVGKTA+V Sbjct: 187 NGSPLERYCTDLTARARDGDIDPVIGRELEIRTMTDVLLRRRQNNPLLTGEAGVGKTAVV 246 Query: 217 EGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILF 276 EGLA I NG+VP L R++++D+GAL+AGA +GEFE RLKGVL AK VILF Sbjct: 247 EGLALAIANGDVPPKLADVRLMSVDVGALLAGAGMKGEFESRLKGVLEAAAKSVAPVILF 306 Query: 277 IDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKV 336 +DE+HT++GAG G DA N+LKPALARG + +GATT EY+++IEKD AL RRFQ + Sbjct: 307 VDEIHTLIGAGGQAGTGDAANLLKPALARGTIRTIGATTWAEYKRHIEKDPALTRRFQVL 366 Query: 337 FVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPD-------- 388 V EP + ++RG+ + HH V + D AI AA LSHRYI R LPD Sbjct: 367 QVPEPEEPAAVHMVRGVARAFARHHRVTVRDEAIRAAVALSHRYIPSRHLPDKAISLLDT 426 Query: 389 --------------------------KAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQL 422 +A + E + I + + + Sbjct: 427 ACARVALSQHAAPGELQHVRQRLLAARAERDLLEQEARIGLDAGQSLAAVRERIEALAAE 486 Query: 423 KLEQQALMKESDEASKKRLDMLNEELSDKERQ--YSELEEEWKAEKASLSGTQTIKAELE 480 + A K +A++ L L++ R+ +A ++ ++ Sbjct: 487 EAAVDARWKAQADAARALLAAREAALAECHRESCAETRAGSLSESRAESRTESRARSHID 546 Query: 481 QAKIAIEQARRVGDLARMSELQYGKIPELE-------------------------KQLEA 515 + A + + + P+ ++LE Sbjct: 547 SSAYAHSDVPAEMHVGSHAGSRAATRPDTHAEAHAAPASPPPAADTPHAGAAPGLRELER 606 Query: 516 ATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNE 575 A L+ +V +A +A+++A WTGIPV RMM E + + L RVIGQ + Sbjct: 607 ALAAAQGDAPLVFPEVDEAIVAQIVADWTGIPVGRMMTDEVAAVRALPATLEARVIGQPD 666 Query: 576 AVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMS 635 A+ + ++ +RAGLADP +P+G FL GP+GVGKTE ALA ++ +++++ I+MS Sbjct: 667 ALRQIGERVQTARAGLADPKKPLGVFLLAGPSGVGKTETALALAEALYGGEQSLITINMS 726 Query: 636 EFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLD 695 E+ E H+VS L GAPPGYVGY EGG LTEAVRRRPYSV+LLDE+EKAH DV + QV D Sbjct: 727 EYQEAHTVSGLKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDEIEKAHRDVHELFFQVFD 786 Query: 696 DGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGE----LDYAHMKELVLGVVSHNFRP 751 G + DG GR +DFRNT +++TSN+G++L + D A +++ ++ + F Sbjct: 787 KGYMEDGDGRYIDFRNTTILLTSNVGAELSASLCADASLAPDAAALRDALMPELLKVFPA 846 Query: 752 EFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERG-YEIHISDEALKLLSENGYDP 810 F+ R+ VV + PL + +A I ++ L R+ R+ ER + D + + Sbjct: 847 AFLGRV-SVVPYRPLEARALARIVRLHLDRVVARMAERHRIALAYDDAVVDYVVGRCLVQ 905 Query: 811 VYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVN 849 GAR L I+Q + L+ L + R+++ Sbjct: 906 ETGARLLIGFIEQHVLPRLSALWLDAFPSKAALARIDIG 944 >UniRef50_Q3JGS2 ATP-dependent Clp protease ATP-binding subunit n=35 Tax=pseudomallei group RepID=Q3JGS2_BURP1 Length = 956 Score = 608 bits (1568), Expect = e-172, Method: Composition-based stats. Identities = 297/889 (33%), Positives = 452/889 (50%), Gaps = 62/889 (6%) Query: 1 MRLDR----LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGIN 56 M +R L AL DA +L + FI+ H LL +E ++ L G + Sbjct: 1 MNRERIFNCLGRTTYAALVDATALGRSRRHAFIDLDHWALCLLQREQSDLARLFELFGSD 60 Query: 57 AGQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGD-NFISSELFVLAA 115 AG+ + + +AL+ + D+ S L R + +Q + S +LA Sbjct: 61 AGEAKRRMEKALDGFDVSGDSLRDI--SSSLERSVGPAVIWSQIAARAGKVRSGHLLLAW 118 Query: 116 LESRGTLADILKAAGAT-----------------------TANITQAIEQMRGGESVNDQ 152 L L+ + A++ G + Sbjct: 119 L-DEDLTRRWLQQRVPSGITSVALDDVVKRYEALAAGWPEADEAPAALDGAALGAQAGEA 177 Query: 153 GAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGK 212 GA+ AL K+ +TE+A +G+LDPV+GRD+E+R I +L RR +NNP+L+GE GVGK Sbjct: 178 GADGTGDALAKWATCVTEQAARGELDPVVGRDDELRTVIDILSRRRQNNPILVGEAGVGK 237 Query: 213 TAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGN 272 TA+VE LAQ+I G VP GL G +V ALD+ + AGA RGEFE+RLK +++ + Sbjct: 238 TAVVEALAQKIHAGAVPPGLVGAQVWALDLARMQAGAGVRGEFEQRLKSLIDAVIASPAP 297 Query: 273 VILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERR 332 +ILF DE HT++GAG A G DA N++KP LARG+L V ATT EY+QYIE DAAL RR Sbjct: 298 IILFCDETHTLIGAGGAAGTGDAANLIKPMLARGQLRMVAATTWSEYKQYIEPDAALVRR 357 Query: 333 FQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAID 392 FQ V V EPS + + +LR + R+ HH V+I D A+ A LS RY+ RQLPDKAI Sbjct: 358 FQAVAVDEPSDDAAVDMLRTIAPRFAAHHGVRIVDSALRGAVELSRRYLPARQLPDKAIS 417 Query: 393 LIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKE 452 L+D A + + M P EL+RL + + + SD R EL ++ Sbjct: 418 LLDTACARVAMSQSCAPAELERLQHQAFAIGQTLD--WRASDRRMGVRTPGDEAELEGRQ 475 Query: 453 RQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQ 512 ++ + + ++A L + A QA A + + Sbjct: 476 ASLAQQAATLETVVDAQRD--EVRAWLARLNDATPQAADGDGAAFAARI----------- 522 Query: 513 LEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIG 572 R +R V + ++EVLA WTG+PV+++ + + ++++ +E L+ + G Sbjct: 523 ---------GANRWVRPWVDEHVVSEVLAEWTGVPVAQLAQDDAQRVVELEAALNAGIHG 573 Query: 573 QNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRI 632 Q A+ +++ A++ S +GL DP RP+G L GPTG GK++ LA +F + +++ Sbjct: 574 QTGAMRSIAQALQVSHSGLNDPRRPLGVMLLAGPTGTGKSQAAAKLAELLFGGERNLLQF 633 Query: 633 DMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQ 692 +M+EF E H+VS L GAPPGYVGY +GG LTEAVR++PYSV+LLDE ++AHPD+ + Q Sbjct: 634 NMNEFQEAHTVSTLKGAPPGYVGYGKGGRLTEAVRKKPYSVLLLDEFDRAHPDIHEVFYQ 693 Query: 693 VLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLI---QERFGELDYAHMKELVLGVVSHNF 749 V D G + DG+GR + FRN ++++TSNLG I + + A + +LV + F Sbjct: 694 VFDQGWMEDGEGRRISFRNCLILLTSNLGEAEIEAACKADPRISQAKLDKLVGERLQGRF 753 Query: 750 RPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYD 809 P + RI ++V F L + IA L L +RL + + + ++ Sbjct: 754 SPALLARI-QLVAFRTLDVDALTGIATQALDELGERLAQNDLQWRADEGVASWIAHAVSQ 812 Query: 810 PVYGARPLKRAIQQQIENPLAQQIL--SGELVPGKVIRLEVNED-RIVA 855 R ++ ++Q + +A+ +L E K +RL NE +V Sbjct: 813 HPANGRAVRDLLRQHVMPAVARGVLAARAEGRALKTVRLAANEKLSLVF 861 >UniRef50_B9K2G7 ATP-dependent Clp protease ATP-binding subunit n=1 Tax=Agrobacterium vitis S4 RepID=B9K2G7_AGRVS Length = 903 Score = 607 bits (1566), Expect = e-172, Method: Composition-based stats. Identities = 318/868 (36%), Positives = 484/868 (55%), Gaps = 27/868 (3%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 ++ L ++AL A S A G + ++ HL++A++ + S P+L G+ LR Sbjct: 10 IESLEPNLRVALETAASTAAGRGHGQVDIAHLLAAVM--DAASFQPVLEQLGLPIAALRR 67 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTL 122 +++ AL+ V G + SQ+++ + A + + + AA++ +L Sbjct: 68 EVSDALD--DTVVSGSGQLALSQNILTLGREAWICASLQSGRRAITLADIFAAMDDEPSL 125 Query: 123 ADILKAAGATT--------ANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQ 174 + + + + Q +S + + + L+ YT DLTE A Sbjct: 126 RALTRGRFPSLRMLDRTALETLLQTDVVAETPKSSLSPASVREDEFLRLYTHDLTEDARA 185 Query: 175 GKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKG 234 G+LDPV+GRD E+R+ I +L RR +NNP+L+GE GVGKTA+ E LA I G VPE L+ Sbjct: 186 GRLDPVVGRDGELRQMIDILLRRRQNNPILVGEAGVGKTAVAEALALEIAAGRVPEKLQS 245 Query: 235 RRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMD 294 R+L LD+ L AGA +GEFE RL GV+ + + +ILFIDE H ++GAG A G D Sbjct: 246 VRLLMLDLTLLQAGAGVKGEFERRLTGVIEAVKRSPEPIILFIDEAHGLIGAGGASGQGD 305 Query: 295 AGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLK 354 A N+LKPALARGE+ + ATT EY++Y EKDAAL RRFQ V V EP E I +LRG+ Sbjct: 306 AANILKPALARGEVRTIAATTWSEYKKYFEKDAALTRRFQPVHVREPDEETAIRMLRGIA 365 Query: 355 ERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDR 414 E + HH V+I D AIVAA LS R++ RQLPDKA+ LID AA+++ + + PE+L Sbjct: 366 ETFMAHHGVKIRDEAIVAAVQLSARFLPARQLPDKAVSLIDTAAATVSLARQTVPEQLLL 425 Query: 415 LDRRIIQLKLEQQAL-MKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQ 473 L + L +E L + + ++R + E+ ++ L+ + AE A+L+ + Sbjct: 426 LKSELAHLTVETDWLAREPENTDVQERRQAVTTEMERLAKEIDSLQARYDAEIAALAASD 485 Query: 474 TIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTD 533 A ++ K+A + A V ++ L+ + L + E K L+ ++V Sbjct: 486 EAPA-VDSDKMASKDAPDVNVTPLITPLRTRGLVRRAASLAPTSAGEEK---LVPHEVDR 541 Query: 534 AEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLAD 593 +A VLARWTGIP+ +++ + E ++ L +VIGQ+ A++ + +A+R +RAGL+D Sbjct: 542 NVVAAVLARWTGIPLGKLLADQIESAKSLDMRLKEKVIGQDAALERIGDAMRAARAGLSD 601 Query: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGY 653 P RP F+ +G +G GKTE LA+ M+ + + I+MSEF E+H VS L+GAPPGY Sbjct: 602 PRRPPAVFMLVGMSGTGKTETALTLADLMYGGSQHLTTINMSEFKEEHKVSMLLGAPPGY 661 Query: 654 VGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTV 713 VGY EGG LTEAVRRRPY V+LLDE++KAHP V +I QV D G L DG+GR VDFRNT Sbjct: 662 VGYGEGGVLTEAVRRRPYGVLLLDEIDKAHPGVQDIFYQVFDKGMLRDGEGRDVDFRNTT 721 Query: 714 VIMTSNLGSDLIQERFGELDYAHMKEL----VLGVVSHNFRPEFINRIDEVVVFHPLGEQ 769 + MT+N GS+L+ + D E ++ + F+P F+ R ++ F PLG++ Sbjct: 722 IFMTANTGSELLASLALDPDTMPEGEALEALLMPELQKQFKPAFLGR-TLLLPFMPLGKE 780 Query: 770 HIASIAQIQLKRLYKRL-EERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENP 828 ++ I IQ+ R+ +R+ G E+ +S+EA L GAR ++ I + + P Sbjct: 781 ALSRIVDIQINRIRERIFSAYGTELALSEEARNALVGRAVASEIGARAIEIMIGRDLLPP 840 Query: 829 LAQQILSGELVPGKVIR---LEVNEDRI 853 L+ L + G + + +E Sbjct: 841 LSSFFLE-LVASGAKVTEALVTHDEKGF 867 >UniRef50_C1GY73 Chaperone protein clpB n=1 Tax=Paracoccidioides brasiliensis Pb01 RepID=C1GY73_PARBA Length = 732 Score = 606 bits (1563), Expect = e-171, Method: Composition-based stats. Identities = 330/721 (45%), Positives = 463/721 (64%), Gaps = 72/721 (9%) Query: 140 IEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTK 199 GG + G E ++ AL++Y +DLT RA+ GKLDPVIGRD EI+RTIQ+L RRTK Sbjct: 65 RPHPPGGTHRMNMGGEPEKSALEEYGVDLTARAKDGKLDPVIGRDGEIQRTIQILSRRTK 124 Query: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259 NNPVLIG G GKTAI+EGLAQRI+ G+VPE +K +RV++LD+G L+AGAK+RG+FEERL Sbjct: 125 NNPVLIGSAGTGKTAILEGLAQRIVRGDVPESVKNKRVISLDLGQLIAGAKFRGDFEERL 184 Query: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319 K VL ++ + +G VILF+DELHT++G GKA+G++DA N+LKPAL+RGEL C GATTL+EY Sbjct: 185 KKVLKEVEEAQGGVILFVDELHTLLGLGKAEGSIDASNLLKPALSRGELQCCGATTLNEY 244 Query: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379 RQ I L+ R Sbjct: 245 RQ------------------------------------------------IEKDVALARR 256 Query: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439 + + +SKP+ + LDR+I+ +++E ++L KE+D SK+ Sbjct: 257 FQPI----------------VVEEPSESKPDAIQELDRQIMTIQIELESLRKETDIPSKE 300 Query: 440 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499 R + L E L K+ + E + W+ EKA L + K +LE+A++ +EQA+R G+ A+ S Sbjct: 301 RREKLEELLKTKQDEVKEFTDVWEKEKAELDAIKQAKEDLERARVDLEQAQREGNFAKAS 360 Query: 500 ELQYGKIPELEKQL-----EAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMES 554 EL+Y IP+LE +L + AT + LL + VT +IA V++R TGIPV+++M Sbjct: 361 ELRYSIIPKLENKLPKEGSDTATSTTADGVVLLHDSVTSDDIAGVVSRTTGIPVNKLMAG 420 Query: 555 EREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTEL 614 E EKL+ ME L V GQ+EA+ AV+NA+R RAGL+ NRP+ SF+FLGPTGVGKTEL Sbjct: 421 EVEKLIHMEDTLRQSVRGQDEALCAVANAVRMQRAGLSGENRPLASFMFLGPTGVGKTEL 480 Query: 615 CKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVI 674 CK +A F+F ++ A++R DMSEF EKH+VSRL+G+P GYVGYE+ G LTEAVRR+PY+V+ Sbjct: 481 CKKMAGFLFSTESAVLRFDMSEFQEKHTVSRLIGSPAGYVGYEDAGQLTEAVRRKPYAVL 540 Query: 675 LLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQER---FGE 731 L DE EKAH D+ +LLQVLD+G LTD QG +DFRNT++++TSNLG++++ GE Sbjct: 541 LFDEFEKAHRDISALLLQVLDEGFLTDAQGHKIDFRNTLIVLTSNLGAEILVGSDPTLGE 600 Query: 732 LDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGY 791 +K V+ V ++ PEF+NRIDE ++F L + + I I+L+ L RL++R Sbjct: 601 EVSTEIKSAVMATVQTSYPPEFLNRIDEFIIFKRLSRKALRDIVDIRLRELQLRLDDRRI 660 Query: 792 EIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNED 851 + + D L + GYDP YGARPL R I ++I N LA +I+ G++ G+V + +N D Sbjct: 661 TLKVDDGVKGWLCDKGYDPRYGARPLNRLIAKEIGNRLADKIIRGQVTTGQVAHVTLNAD 720 Query: 852 R 852 + Sbjct: 721 K 721 >UniRef50_P37571 Negative regulator of genetic competence clpC/mecB n=137 Tax=Bacteria RepID=CLPC_BACSU Length = 810 Score = 601 bits (1549), Expect = e-170, Method: Composition-based stats. Identities = 309/871 (35%), Positives = 471/871 (54%), Gaps = 84/871 (9%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M R T + Q LA AQ AL + I H++ L+ + G + L + G+ + ++ Sbjct: 1 MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSEKI 60 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES-R 119 + ++ + R ++ T + + +V+ L A+K G +++ +E +L + Sbjct: 61 QKEVESLIGRGQEMSQT---IHYTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGE 117 Query: 120 GTLADILKAAGATTANITQAIEQMRG----GESVNDQGAEDQRQALKKYTIDLTERAEQG 175 G A +L G + Q + Q+ G G S + L DLT A++ Sbjct: 118 GVAARVLNNLGVSLNKARQQVLQLLGSNETGSSAAGTNSNANTPTLDSLARDLTAIAKED 177 Query: 176 KLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGR 235 LDPVIGR +EI+R I+VL RRTKNNPVLIGEPGVGKTAI EGLAQ+IIN EVPE L+ + Sbjct: 178 SLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDK 237 Query: 236 RVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDA 295 RV+ LDMG +VAG KYRGEFE+RLK V++++ + GN+ILFIDELHT++GAG A+GA+DA Sbjct: 238 RVMTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQA-GNIILFIDELHTLIGAGGAEGAIDA 296 Query: 296 GNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKE 355 N+LKP+LARGEL C+GATTLDEYR+YIEKDAALERRFQ + V +PSV+++I IL+GL++ Sbjct: 297 SNILKPSLARGELQCIGATTLDEYRKYIEKDAALERRFQPIQVDQPSVDESIQILQGLRD 356 Query: 356 RYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRL 415 RYE HH V ITD AI AA LS RYI+DR LPDKAIDLIDEA S +R++ + P L L Sbjct: 357 RYEAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKEL 416 Query: 416 DRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTI 475 ++++ +++ E+ A ++ + ++ L + Q + ++ WK ++ Q Sbjct: 417 EQKLDEVRKEKDAAVQSQEF---EKAASLRDTEQRLREQVEDTKKSWKEKQG-----QEN 468 Query: 476 KAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAE 535 + + ++++++ + K+ +E L + + + + + V A Sbjct: 469 SEVTVDDIAMVVSSWTGVPVSKIAQTETDKLLNMENILHSRVIGQDEAVVAVAKAVRRAR 528 Query: 536 IAEVLARWTGIPVSRMMESEREKL--LRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLAD 593 + P+ + + + + L + G E R +++ Sbjct: 529 AGLKDPKR---PIGSFIFLGPTGVGKTELARALAESIFGDEE---------SMIRIDMSE 576 Query: 594 PNRPIGSFLFLG-PTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPG 652 + +G P G + L + ++V +D E Sbjct: 577 YMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHP------------ 624 Query: 653 YVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNT 712 DVFNILLQVL+DGRLTD +GRTVDFRNT Sbjct: 625 --------------------------------DVFNILLQVLEDGRLTDSKGRTVDFRNT 652 Query: 713 VVIMTSNLGSDLIQERF--------GELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFH 764 ++IMTSN+G+ ++ ++ MK+ V+G + FRPEFINRIDE++VFH Sbjct: 653 ILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFH 712 Query: 765 PLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQ 824 L ++H+ I + +L KRL+E+ I ++D A ++E G D YGARPL+RAIQ+ Sbjct: 713 SLEKKHLTEIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKH 772 Query: 825 IENPLAQQILSGELVPGKVIRLEVNEDRIVA 855 +E+ L++++L G + G+ I L+V + V Sbjct: 773 VEDRLSEELLRGNIHKGQHIVLDVEDGEFVV 803 >UniRef50_C9M6K4 Negative regulator of genetic competence ClpC/MecB n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M6K4_9BACT Length = 826 Score = 601 bits (1549), Expect = e-170, Method: Composition-based stats. Identities = 284/874 (32%), Positives = 452/874 (51%), Gaps = 84/874 (9%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M ++ + AL A AL ++ I HL+ + + S + LL + G+ A L Sbjct: 1 MMWQFFSDSCKRALQIAHREALKMRSKEIGTAHLLLGIAAEGTSSAAGLLEANGVTAEGL 60 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALE-SR 119 R + ++ D+ S L+ A+ + + A L+ + Sbjct: 61 RRTLK--IDETIPEPDEQTDLPFSDGARGCLDAALNSARSLDAELVDPSCLLAAVLKVND 118 Query: 120 GTLADILKAAGATTANITQ-----------AIEQMRGGESVNDQGAEDQRQALKKYTIDL 168 +L G + + + + ++ N +G E + + ++ +DL Sbjct: 119 NGACRLLATLGVSPETLRERAAELLASSKREESPVHSPKAGNGEGDEAELAIIGQFCVDL 178 Query: 169 TERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEV 228 T RA G+LDP++GR +E RR +QVL RRTKNNPVL+G+PGVGKTA+VEGLAQ I + V Sbjct: 179 TARAAAGELDPIVGRQKETRRLMQVLCRRTKNNPVLVGDPGVGKTAVVEGLAQLIQSEMV 238 Query: 229 PEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGK 288 P+ LKG+++L L++G+LVAGAKYRG+FEER + ++ +K + ILFIDE+HT++G G Sbjct: 239 PDPLKGKKILQLNVGSLVAGAKYRGDFEERFQKLIAQASKSKD--ILFIDEIHTLIGTGN 296 Query: 289 ADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIA 348 A+G++DA NMLKP+LARGEL +GATT EYR+YIE+D ALERRFQ + +AEP + +A Sbjct: 297 AEGSLDAANMLKPSLARGELRIIGATTAAEYRRYIERDGALERRFQPIDIAEPDFDSAVA 356 Query: 349 ILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSK 408 I+ GL RYE HH V A A LS R++ DR+LPDKAIDLIDEA + ++ Sbjct: 357 IVSGLLPRYEEHHGVVYAPEAAETAVRLSSRFLTDRRLPDKAIDLIDEAGAKAQLDRSDW 416 Query: 409 PEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKAS 468 P EL + R+ QL+ +++A + +D R E + + + + + S Sbjct: 417 PPELKEVKTRLGQLRRDKEAAILAADFELAGRFRSDEAETAQQLEENLSVWRRGRRMSGS 476 Query: 469 LSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLR 528 G + L + + +MS+ + ++ LE ++E + + + + Sbjct: 477 RVGPDDLAQVL--------SSWCGVPVGQMSQSEAERLLTLESRVEKHLIGQSEAVSCVC 528 Query: 529 NKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSR 588 + G + + + + Sbjct: 529 RALRRNRS-----------------------------------GLQDEKRPIGSFLFLGP 553 Query: 589 AGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVG 648 +G+ TEL + +A ++ SD+A++ +DMSEF ++++VSRL+G Sbjct: 554 SGVGK------------------TELARVVARELYGSDKALIALDMSEFHDRYTVSRLIG 595 Query: 649 APPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVD 708 PGYVGYE+ G LTEAVRR PYSV+LLDE+EKA P V ILLQ+++DGRLTDG G TVD Sbjct: 596 TGPGYVGYEDRGQLTEAVRRHPYSVVLLDEIEKADPQVNRILLQIMEDGRLTDGHGDTVD 655 Query: 709 FRNTVVIMTSNLGSDLIQERFGELDYAHMKE-----LVLGVVSHNFRPEFINRIDEVVVF 763 FRN ++IMTSNLGS + A + ++ + F PE + R+D+VV F Sbjct: 656 FRNALIIMTSNLGSREAAKSPFGFSDAGRSDQAARGVMSDELKRFFPPELLGRMDDVVYF 715 Query: 764 HPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQ 823 L + ++ I + L +RL+ RG + +S + + + GARPL+R +++ Sbjct: 716 RQLNAEDLSKIFDLLLAPAVQRLKRRGIDFSVSPQLKLAILDEAARQGAGARPLRRLVEK 775 Query: 824 QIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857 ++ +P A+ +++ G+++ + + AV+ Sbjct: 776 RVSDPTAEWLIANPGASGELV-CSLEDGE-TAVR 807 >UniRef50_C7H8Y8 Clp protease, ATP-binding subunit ClpC n=3 Tax=Clostridiales RepID=C7H8Y8_9FIRM Length = 767 Score = 600 bits (1546), Expect = e-170, Method: Composition-based stats. Identities = 304/719 (42%), Positives = 429/719 (59%), Gaps = 68/719 (9%) Query: 139 AIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRT 198 A ++ + +R+ L Y +LT +A +GKLD +IGRD EI RTIQ+L RR Sbjct: 112 AQNGKNEKKAGKNDKKPPRRKFLDTYCENLTRKAREGKLDDIIGRDREIYRTIQILSRRQ 171 Query: 199 KNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEER 258 KNNP LIGE GVGKTAI EG+A+RI G+VP GL+ + + LD+ +LVAG ++RG+FE+R Sbjct: 172 KNNPCLIGEAGVGKTAIAEGIAERIAKGQVPAGLQDKEIFLLDLTSLVAGTQFRGQFEQR 231 Query: 259 LKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDE 318 +KG+L+++ K GNVILFIDE+HT+ AG+++GAM+AGN+LKPAL+RGE+ +GATT +E Sbjct: 232 VKGLLSEV-KAAGNVILFIDEIHTITSAGESEGAMNAGNILKPALSRGEIQVIGATTFNE 290 Query: 319 YRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSH 378 YR+YIEKD ALERRFQ V V EPSV DT+A++ G+K YE HHHVQ+ + A TLS Sbjct: 291 YRKYIEKDQALERRFQPVRVEEPSVADTLAVMGGIKHYYEEHHHVQVPADVLNATVTLSE 350 Query: 379 RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASK 438 +D Sbjct: 351 ---------------------------------------------------RYITDRYLP 359 Query: 439 KRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARM 498 + L +E + E+ + L + +A++E A D R+ Sbjct: 360 DKAIDLLDEACACCNLAHPVISEYLTMQKELEALKQEEADMENA-----DVNEPIDYERV 414 Query: 499 SELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 558 +E + ++ +LE++L A G+ +VT ++A+V+ WTGIP ++ E+E K Sbjct: 415 AE-RKTRMAQLERELPAKQAAAGE------IQVTMDDVAKVIELWTGIPAVKIRETEYAK 467 Query: 559 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 618 L +E EL ++IGQ++AV V+ A++RSRA L+ RP SF+F+GPTGVGKTEL K L Sbjct: 468 LASLETELKKKIIGQDDAVHLVAQAVKRSRADLSGRRRP-ASFIFVGPTGVGKTELVKQL 526 Query: 619 ANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678 AN +FD + ++R+DMSE+MEK++VSR++G+PPGYVGYEE G LTE VRRRPYSV+L DE Sbjct: 527 ANQLFDGPDPLIRLDMSEYMEKYAVSRMIGSPPGYVGYEEAGQLTEKVRRRPYSVVLFDE 586 Query: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGEL---DYA 735 +EKAHPDV NILLQ+LD+G++ D QGRTVDF NTV+ MTSN GS + Sbjct: 587 IEKAHPDVMNILLQILDEGKINDAQGRTVDFSNTVICMTSNAGSSDQTTASLGFNRSEEE 646 Query: 736 HMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHI 795 +E +S RPEF+ R+DEV+ F PL E+ + IA + L +E +G Sbjct: 647 RNEEKSRKALSQFLRPEFLGRVDEVITFKPLSEETLQGIAALMLDEYKPSMEAKGIAYSY 706 Query: 796 SDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIV 854 + AL L +GAR L+R I++ +E+P A++I+ G LV G + ++ D IV Sbjct: 707 TPAALAALVHKSQGGKFGARDLRRTIRKAVEDPAAEKIIDGTLVSGSTLTVDAENDEIV 765 >UniRef50_C2BFB3 ATP-binding ClpB chaperone n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BFB3_9FIRM Length = 843 Score = 596 bits (1536), Expect = e-168, Method: Composition-based stats. Identities = 292/857 (34%), Positives = 483/857 (56%), Gaps = 22/857 (2%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M + + + + +A +A+ +N + LH+ A+L E + + + Sbjct: 1 MDISKYSQSSVEIIKEANKVAIRKNNVEVSDLHIFYAILTLEEKLIRTYFKELKVIYQDV 60 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG 120 D AL +L +G + S+ R L + +++++ + + I +E +LA L Sbjct: 61 LDDTENALTKLRSAKGISS-LYTSRSYQRALLIAEEISRNQFEEKIKTEHLMLALLREAD 119 Query: 121 TLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPV 180 L A T + + E + ++ L+KY LT+ A +G+LDPV Sbjct: 120 MPTAKLAATHGLTYKNFNELVAKKFNEYLLKGVDQETIINLEKYGTVLTKEAIEGRLDPV 179 Query: 181 IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL 240 IGR+EE R I++L RR KNNPVLIG+ GVGKTAIVEG+ QRI+ G+VP+ LK + + +L Sbjct: 180 IGREEETRTAIRILSRRIKNNPVLIGDAGVGKTAIVEGIVQRIVAGDVPDDLKDKIIFSL 239 Query: 241 DMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLK 300 DM +LVAGAKYRG+FEERLK +L + +G +ILFIDE+H ++G+G A G MD NMLK Sbjct: 240 DMTSLVAGAKYRGDFEERLKKILEIIKDSKGRIILFIDEIHNIIGSGSASGTMDTANMLK 299 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELH 360 P LARG++ +GATT++EYR+YIE D AL+RRFQK+ + EPS+E TIAI+RG+K +YE H Sbjct: 300 PMLARGDILTIGATTIEEYRKYIEVDKALDRRFQKILIEEPSIETTIAIMRGIKSKYENH 359 Query: 361 HHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRII 420 H ++ITDPA+ A LS R++ +R+LPD AID+IDEA + ++M D KPEELD L R+II Sbjct: 360 HMIKITDPALTEAVKLSKRFLTERKLPDVAIDVIDEACAQVKMARDQKPEELDELHRKII 419 Query: 421 QLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELE 480 QL++E AL E D S R E++ + E++ + + + EK ++ E++ Sbjct: 420 QLEMENIALKNEKDSLSNHRSKEKEEKIKELEKELEKKTDLYNKEKERQETIVKLEREID 479 Query: 481 QAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVL 540 IE+A+ D + + K EK LR KV +E+ +++ Sbjct: 480 IIGFEIEEAKDKRDFENLDKFVSLKDNVSEK---LKKIENQGEFYPLRTKVGVSEVKDII 536 Query: 541 ARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGS 600 ++ +G+P S++ + + + + ++L +G ++ +D + N + GL + ++P+ S Sbjct: 537 SKMSGMPKSKLQYDKLDSINIVREKLKEEFVGGDDMIDKIINTYIIAEGGLFERSKPVLS 596 Query: 601 FLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG 660 F+ GP+ GK+ + K LA+++++ D++++ DMSEF +K S+++L+GAPPGYVGYE GG Sbjct: 597 FIVTGPSSSGKSYIAKLLADYLYEGDKSLLSFDMSEFTDKSSITKLIGAPPGYVGYEFGG 656 Query: 661 YLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL 720 LT+A+R +PYSV++ + +E AH +V N++LQ++ DG + D +GR ++ +N++V++T + Sbjct: 657 VLTQALRTKPYSVLVFENIENAHFEVQNLVLQIVQDGTIKDNKGRDINLKNSIVVLTMTV 716 Query: 721 GSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLK 780 E KE + +D V L + + + + K Sbjct: 717 ----------EDGDESAKEKLDVDFGKY--------VDYVFKLKRLDDDKLDKLISLNFK 758 Query: 781 RLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVP 840 L K L ER + + + D + AR LK+ I+Q + + ++ L+ E+ Sbjct: 759 ELEKALAERQINLSYAGGFFDKFGKYAKDEGFDARSLKKLIEQDVYFLICEKNLTSEIKA 818 Query: 841 GKVIRLEVNEDRIVAVQ 857 + L+ + + V+ Sbjct: 819 FSELILDFDGENKFTVK 835 >UniRef50_A6G683 Probable ATP-dependent Clp protease n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G683_9DELT Length = 767 Score = 595 bits (1533), Expect = e-168, Method: Composition-based stats. Identities = 287/787 (36%), Positives = 427/787 (54%), Gaps = 71/787 (9%) Query: 89 RVLNLCDKLAQKRGDNFISSELFVLAALESRGTLA-DILKAAGATTANI----------- 136 RVL Q G ++ ++A ++A +L+ G ++ Sbjct: 5 RVLQRAVLHVQGAGKAEVTGANLLVALFAEPESMAVYLLEQKGVRRRDVTLFISHGIGKG 64 Query: 137 ---TQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQV 193 + + G + + L Y +DL RA G +DP++GR++E+ R IQV Sbjct: 65 NSRSAPRSRPTGPGADGEDEDSVADDPLTAYAVDLAARAASGDIDPLVGREQELTRLIQV 124 Query: 194 LQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRG 253 L RR KNNPVL+GEPGVGKTA+VEGLA + + +VPE + + ALDMG+L+AG K+RG Sbjct: 125 LCRRRKNNPVLVGEPGVGKTAVVEGLALAVHDQKVPEPIADAHIYALDMGSLLAGTKFRG 184 Query: 254 EFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGK-ADGAMDAGNMLKPALARGELHCVG 312 +FEERLK V+ + +Q G ILFIDE+HT++GAG + G+MDA NMLKPAL G + C+G Sbjct: 185 QFEERLKAVVAAIEEQPG-AILFIDEIHTVIGAGATSGGSMDASNMLKPALNAGRVRCIG 243 Query: 313 ATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVA 372 ATT EY + ++D AL RRFQK+ + EP+ ++ I IL+GLK YE HH+V T AI Sbjct: 244 ATTYKEY-KNFDRDPALARRFQKIEIVEPTTDEAILILQGLKPAYEAHHNVSYTPDAIEE 302 Query: 373 AATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKE 432 + L+H+Y+ DR+LPD AID++DE ++ R+ K + L + + Sbjct: 303 SVRLAHKYLRDRRLPDSAIDVMDETGAAARLGDYGKAKPAGALPAGDEDAPEGADSKEPK 362 Query: 433 SDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRV 492 ++EA+ + + E + + R Sbjct: 363 AEEAADEMTLAVGETTALERR-------------------------------------DP 385 Query: 493 GDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMM 552 G + E + + A + + ++ V+AR IP + Sbjct: 386 GPVIHTGEAAPREAAPGAGEAAEAGEAIIIDVP---------QVETVIARMARIPPKSVS 436 Query: 553 ESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKT 612 +R L + + L + GQ+EAV + AI+R+RAGLA P++PIG FLF GPTGVGKT Sbjct: 437 TDDRAVLKGLGEGLRQVLFGQDEAVATATKAIKRARAGLARPDKPIGCFLFTGPTGVGKT 496 Query: 613 ELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYS 672 EL + LA + +R DMSE+MEKHSVSRL+GAPPGYVG+++GG LT++V + P+S Sbjct: 497 ELARQLARLL---GMPFLRFDMSEYMEKHSVSRLIGAPPGYVGFDQGGQLTDSVAKNPHS 553 Query: 673 VILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERF--G 730 ++LLDE+EKAHPD+F++LLQV+D LTD G+ DFRN ++IMTSN G+ + +R Sbjct: 554 IVLLDEIEKAHPDIFSVLLQVMDSATLTDTTGKKTDFRNVILIMTSNAGAFEMTQRKVGF 613 Query: 731 ELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERG 790 D ++ + F PEF NR+D++V F L + I +A L+ L +L ER Sbjct: 614 GSDDGNVDSAANKALERTFSPEFRNRLDKIVTFGQLPQPVIEKVADKMLRELEIQLSERD 673 Query: 791 YEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVN- 849 + + A +S GYD +GARP+ R I + I+ L ++L G L G + ++ + Sbjct: 674 VRLTWTPAARDWVSRKGYDKKFGARPMARVIDEAIKGALVDELLFGRLEGGGSVEVDCDR 733 Query: 850 -EDRIVA 855 ED +V Sbjct: 734 AEDELVF 740 >UniRef50_B8NZA1 Predicted protein (Fragment) n=1 Tax=Postia placenta Mad-698-R RepID=B8NZA1_POSPM Length = 682 Score = 594 bits (1530), Expect = e-168, Method: Composition-based stats. Identities = 309/688 (44%), Positives = 434/688 (63%), Gaps = 14/688 (2%) Query: 160 ALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGL 219 A+ +Y D+T A +GKL+ IGRDEEIRR IQ+L RRTKN+ VLIGEPGVGKTA+ EGL Sbjct: 1 AVLRYATDMTALAREGKLNDTIGRDEEIRRVIQILCRRTKNSAVLIGEPGVGKTAVAEGL 60 Query: 220 AQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEE-----RLKGVLNDLAKQEGNVI 274 A RI + +VPE LKG + +LD+GAL AGA +GE+E R + + VI Sbjct: 61 AHRINSRDVPEHLKGT-IYSLDLGALFAGA-GKGEYEAASLFPRSLRLYWLTQQNANPVI 118 Query: 275 LFIDELHTMV---GAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALER 331 LFIDELH + + MDA N+LKPALARG+ C+GATTL EYR++IEKD ALER Sbjct: 119 LFIDELHLITVGKSSSGQSSGMDAANLLKPALARGQFRCIGATTLAEYREHIEKDGALER 178 Query: 332 RFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAI 391 RF V V EP++E+ ILRG +ERYE HH V I D AIV A L+HRY+ R+LPD A Sbjct: 179 RFATVLVNEPTIEEATTILRGTRERYESHHRVWIMDQAIVTAVKLAHRYLTARRLPDSAF 238 Query: 392 DLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDK 451 DL+DEA +S R+ D KPE +D +++ ++Q++ +A+ +++ A + L+ S Sbjct: 239 DLMDEACASARVSQDMKPEAIDTVEQELLQIEGRIKAIERDNHPADDRALEEAKSVRSSL 298 Query: 452 ERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEK 511 E + LEE+ + + ++ ++ K ++ +++ + +E + K+ + K Sbjct: 299 ETRKKRLEEQQQKVREWWGDISALRGLIKAKKDDLDIVKKLTE----TENRGPKVADNMK 354 Query: 512 QLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVI 571 L A R + +T IAEV+ R T IPV R++ S++ +LL +E L +V+ Sbjct: 355 ALNAYEHRRYIVSRSSPDIITPESIAEVVERATKIPVQRLLASDKTRLLGLEDALAQQVV 414 Query: 572 GQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVR 631 GQ EAV +V+NAI+ SR GL + NRPI S LF GP+G GKT L KALA +F +MVR Sbjct: 415 GQPEAVKSVTNAIQLSRTGLNNTNRPIASLLFTGPSGTGKTLLSKALAQELFGQTTSMVR 474 Query: 632 IDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILL 691 ID SE+ + HS+SRL+G+PPGYVGY++GG LTE VRR PY ++LLDE+EK + + L Sbjct: 475 IDGSEYSQSHSISRLIGSPPGYVGYDQGGQLTEYVRRTPYCIVLLDEIEKTCLEFLTLFL 534 Query: 692 QVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRP 751 QVLD+GRLTDG GR VDFRN V+IMTSN+G+DL+ G + A +++ F Sbjct: 535 QVLDEGRLTDGHGRLVDFRNCVIIMTSNVGADLLSAENGPIQEAVRLKVMDRFKDVRFPV 594 Query: 752 EFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPV 811 EF+NRID+VV+F + + + SI + L+ L +R + + I +A L G P Sbjct: 595 EFLNRIDDVVMFRTMSQAVMKSILKKNLQDLKQREGMKRLHLDIDAQAETWLISVGISPQ 654 Query: 812 YGARPLKRAIQQQIENPLAQQILSGELV 839 YGARPL R IQ+++ NPL+Q++L G + Sbjct: 655 YGARPLARVIQRELLNPLSQRLLEGTVK 682 >UniRef50_D1ZN19 Whole genome shotgun sequence assembly, scaffold_63 n=1 Tax=Sordaria macrospora RepID=D1ZN19_SORMA Length = 780 Score = 593 bits (1528), Expect = e-167, Method: Composition-based stats. Identities = 331/750 (44%), Positives = 470/750 (62%), Gaps = 51/750 (6%) Query: 114 AALESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAE 173 A + + T + GG + GA++++ AL++Y IDLT RA Sbjct: 42 ALNVATSLANSLHLLPTIATRSYANGRPHPPGGTHRMNLGADEEKPALEQYGIDLTARAR 101 Query: 174 QGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLK 233 GKLDP GLA I+ G VPE +K Sbjct: 102 DGKLDP--------------------------------------GLALEIVKGAVPESIK 123 Query: 234 GRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAM 293 +RV++LD+G+L+AGAK+RG+FEERLK VL ++ + G VILFIDELHT++G GKA+G++ Sbjct: 124 NKRVISLDLGSLIAGAKFRGDFEERLKKVLTEVQQANGEVILFIDELHTLLGLGKAEGSI 183 Query: 294 DAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGL 353 DA N+LKPAL+RGEL C GATTL+EYRQ IEKD AL RRFQ + V EP+VEDTI+ILRG+ Sbjct: 184 DASNLLKPALSRGELQCCGATTLNEYRQ-IEKDVALARRFQPILVNEPTVEDTISILRGI 242 Query: 354 KERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELD 413 KE+YE+HH V+ITD A+VAAA S+RYI DR LPDKAIDL+DEAASS+R+Q +SKP+++ Sbjct: 243 KEKYEVHHGVRITDGALVAAAAYSNRYITDRFLPDKAIDLMDEAASSLRLQQESKPDDIQ 302 Query: 414 RLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQ 473 RLD++I+ +++E ++L KE D AS +R + L +L + + S L E+W+ EK+ + + Sbjct: 303 RLDQKIMTIQIELESLRKEKDVASVERREKLEADLKKFQDEVSVLTEKWEKEKSEIDKIK 362 Query: 474 TIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTD 533 +AEL++A+I +EQA+R G+ R SEL++G IP LEKQL + L+ + VT Sbjct: 363 QTQAELDRARIELEQAQRTGNFGRASELRFGVIPNLEKQLPKDGERPTGDNTLIHDSVTA 422 Query: 534 AEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLAD 593 +IA V++R TGIP+ ++++ R+ + + + Sbjct: 423 DDIANVVSRITGIPILQVVQ-RPHGETDPHGGHPPRICSRPRRGSEGGRRRSENAKSRTE 481 Query: 594 PNRPIGSFL--FLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPP 651 P L P GVGKTELCK LA F+F ++ A+VR DMSEF EKH++SRL+GAP Sbjct: 482 RREPSTGILSSSSAPLGVGKTELCKKLAGFLFSTESAVVRFDMSEFQEKHTISRLIGAPS 541 Query: 652 GYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRN 711 GYVGYE+ G LTEAVRR+PY+V+L DE EKAH D+ +LLQVLD+G LTD QG VDF+N Sbjct: 542 GYVGYEDAGQLTEAVRRKPYAVLLFDEFEKAHRDISALLLQVLDEGYLTDAQGHKVDFKN 601 Query: 712 TVVIMTSNLGSDLIQERFGELDYAH---------MKELVLGVVSHNFRPEFINRIDEVVV 762 T++++TSNLG+D++ + + Y +K+ V+ VV+ + PEF+NRID +V Sbjct: 602 TIIVLTSNLGADILVDANPLVPYKETEDGDIHPDVKKAVMDVVASQYPPEFLNRIDSFIV 661 Query: 763 FHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQ 822 F L + + I I+L+ L +RL +R + + DE + L+E GYDP +GARPL R I Sbjct: 662 FKRLALEALRDIVDIRLRELQERLNDRRITLTVPDEVRQWLAERGYDPKFGARPLNRLIT 721 Query: 823 QQIENPLAQQILSGELVPGKVIRLEVNEDR 852 +I N LA +I+ G++ G +E+ ED+ Sbjct: 722 TEIGNGLADKIIRGQIKTGDNAVVEIKEDK 751 >UniRef50_A3DC71 ATPase AAA-2 n=13 Tax=Clostridiales RepID=A3DC71_CLOTH Length = 803 Score = 592 bits (1526), Expect = e-167, Method: Composition-based stats. Identities = 317/813 (38%), Positives = 458/813 (56%), Gaps = 81/813 (9%) Query: 45 SVSPLLTSAGINAGQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDN 104 ++ +L GI+ ++ +N+ + + G P + + + Sbjct: 41 PINQILEQTGISEEEI-DGLNKQMETFFEDMDFSGTSDPEGGTATANPFFNLINKSLNKT 99 Query: 105 FISSELFVLAALESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKY 164 +ES G + + + ++ D+ +++ L Y Sbjct: 100 -----------MESMGFKSSKDETESDGKTDREVKDDKNNTRTKTQDKKMPKKKKYLDTY 148 Query: 165 TIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRII 224 +L +A++GK+D VIGR+ EI R IQ+L RR KNNPVLIGEPGVGKTAI EGLA RI+ Sbjct: 149 GTNLIVKAKEGKIDRVIGRNREIERVIQILNRRNKNNPVLIGEPGVGKTAIAEGLALRIV 208 Query: 225 NGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMV 284 N +VP L V LD+ ++VAG ++RG+FE R+KG++ + K GN+IL IDE+H ++ Sbjct: 209 NRDVPVKLFNAEVYVLDLTSIVAGTQFRGQFENRMKGIIEEC-KALGNIILVIDEIHNIM 267 Query: 285 GAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVE 344 GAG+A+GAM+A N+LKPALA+GE+ +GATTLDEYR++IEKD+ALERRFQ V V EPSVE Sbjct: 268 GAGEAEGAMNAANILKPALAKGEIQVIGATTLDEYRKHIEKDSALERRFQPVLVDEPSVE 327 Query: 345 DTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQ 404 +TI IL + I E+ +++ Sbjct: 328 ETIEIL--------------------------------------RGIKDYYESYHRVKIS 349 Query: 405 IDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKA 464 + + +R I L +A+ + S+ + + Sbjct: 350 DEVIRAAVILSERYITDRFLPDKAIDVLDEAGSRANIKNV-------------------- 389 Query: 465 EKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTM 524 + ++++ K A + D + ++L+ + K L+ +LE K+ Sbjct: 390 VLLEYEALKEELKKVQEEKENAVSADSIEDYQKAADLKVREC----KLLQQIKELEQKSK 445 Query: 525 RLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAI 584 + ++T +IA V+ WT IPV R+ E E EKLL +E+ LH RVIGQ+EAV +V+ AI Sbjct: 446 DM---ELTVDDIAYVIESWTKIPVQRLTEIEAEKLLNLEERLHKRVIGQHEAVKSVARAI 502 Query: 585 RRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVS 644 RR+RA +P SF+F+GPTGVGKTEL KALA +F S+EA++R+DMSE+MEKH+VS Sbjct: 503 RRNRADFKKRKKP-ASFIFVGPTGVGKTELVKALAVELFGSEEALIRLDMSEYMEKHTVS 561 Query: 645 RLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQG 704 +L+GAPPGYVGY+EGG LTE VRR+PYSVILLDE+EKAHPDVFN+LLQ+LDDGR TD G Sbjct: 562 KLIGAPPGYVGYDEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNMLLQILDDGRATDSHG 621 Query: 705 RTVDFRNTVVIMTSNLGSDLIQERFG--ELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 762 RTV F NTV+IMTSN G+ L G +Y ++ V V+ FRPEF+NR+DE++V Sbjct: 622 RTVSFENTVLIMTSNAGTSLKASSIGFANDNYIALENKVKEVLKETFRPEFLNRVDEIIV 681 Query: 763 FHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQ 822 F+ L + + I + K + + +E + + D + + E GYDP YGARPL+R IQ Sbjct: 682 FNHLTKDELKQIVDLMFKDVVEEVENKKMTVKFQDGVREFILEKGYDPKYGARPLRRTIQ 741 Query: 823 QQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855 + IE+ LA+ L G L G I + V + IV Sbjct: 742 RYIEDELAEMYLKGLLAEGCSIVVGVRDGNIVF 774 >UniRef50_C7PG59 ATPase AAA-2 domain protein n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PG59_CHIPD Length = 816 Score = 588 bits (1516), Expect = e-166, Method: Composition-based stats. Identities = 273/856 (31%), Positives = 445/856 (51%), Gaps = 54/856 (6%) Query: 1 MRLDRLT---NKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINA 57 M L T + Q A+ AQ+LA H + P HL+ A L++E G L + I+ Sbjct: 1 MTLTTYTIYAPEVQSAIRIAQALAKEHHHANYTPAHLLLACLHKEVGITPQ-LQAMNIDT 59 Query: 58 GQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAA-L 116 L L+ +P+ + VL D + + + + ++A Sbjct: 60 YYLEEWAEVRLDSVPKAGRLPEQPDADEYAANVLQEADAVRLEYDLDAADAWCVLVAIST 119 Query: 117 ESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGK 176 G + LK A + + + + +KY LT+ Sbjct: 120 PGVGFSFEQLKTFPLQRAQLLSHFNKKDSNGAAPKTTIVTGKSVAQKYIYKLTDPQRLQA 179 Query: 177 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRR 236 + GRD E+R +++L R+ +++ ++ GE GVGKTA+ + LA I+ + P L+ Sbjct: 180 KHALAGRDAEVRTMMEILTRKGRSSILITGEGGVGKTALADALASAILQKQAPLQLQQTD 239 Query: 237 VLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAG 296 + ALD GA +AGA Y+ E E+RL+ +++ L + G +LFID LHT++ + A G Sbjct: 240 IYALDYGAFIAGAAYKNELEDRLQQIMSQLQEA-GRHVLFIDNLHTLLDK-QPGSAGGIG 297 Query: 297 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 356 N+LK A+ +G++ + +T + +R+ IE D L F+ V +AEP +++ + Sbjct: 298 NVLKAAMNKGDITLIATSTPEGFRKLIEPDGLLRHCFEVVQLAEPDEATAARMIQAVMPD 357 Query: 357 YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 416 YE ++++++ I A LS RY+ +R LPD A++L+D ++IR D+ LD L Sbjct: 358 YESYYNLKVAPEVISEAIKLSRRYLKERSLPDSAVNLLDRTLAAIRTTQDTGKITLDDLK 417 Query: 417 RRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476 ++ EA+ + L ++YS L + + Sbjct: 418 AKL---------------EAAGDSREELRWWYQQCMQRYSALVTTRLQPQQDIYKID--- 459 Query: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 536 + A + I +LE +E VT ++ Sbjct: 460 -----------------NEAALKTALLDIIAQLEPLVETQHVA-----------VTGIDL 491 Query: 537 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNR 596 A ++A TGIP+ ++ ERE+L+ M+ EL RV+GQ+ A+ VS AI SR+GL+ P + Sbjct: 492 ATMIAESTGIPLGKIQSGERERLVNMDLELRKRVVGQDHALKTVSEAILESRSGLSRPGQ 551 Query: 597 PIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGY 656 PIGSF FLGPTG GKTEL K+LA+F+F + M+R DMSEF E+HS + L GAPPGYVGY Sbjct: 552 PIGSFFFLGPTGTGKTELAKSLADFLFQDERCMIRFDMSEFKEEHSAALLYGAPPGYVGY 611 Query: 657 EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 716 EEGG L +R++PY+V+L DE+EKAHP VF+I LQ++D+G+L D G+T DF N +++ Sbjct: 612 EEGGLLVNKIRQQPYAVVLFDEIEKAHPSVFDIFLQIMDEGKLHDRLGKTGDFSNALILF 671 Query: 717 TSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQ 776 TSN+GSD+I + F + + ++ +++ NFRPEF+ R+ E+V F P+ ++++ I Sbjct: 672 TSNIGSDVIAQSFRQ-GVIPASQQLMEIMARNFRPEFLGRLTEIVPFGPIQQENVVKIFD 730 Query: 777 IQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSG 836 I LK L + L ++ + +S A + L+ GY P+YGARPLK I+ ++ PL++ I+ G Sbjct: 731 IHLKHLLQLLTQQQITLDVSVAAREKLAAEGYSPLYGARPLKEVIRSRLRKPLSRMIIEG 790 Query: 837 ELVPGKVIRLEVNEDR 852 L P ++L+++ Sbjct: 791 SLQPHTTVKLDIDAQG 806 >UniRef50_Q53N47 ATP-dependent Clp protease ATP-binding subunit clpA CD4B,chloroplast, putative, expressed n=5 Tax=cellular organisms RepID=Q53N47_ORYSJ Length = 918 Score = 588 bits (1516), Expect = e-166, Method: Composition-based stats. Identities = 322/867 (37%), Positives = 485/867 (55%), Gaps = 82/867 (9%) Query: 1 MRLDRLTN----KFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGIN 56 M++ T + A+ + H + + H L S P++ G+ Sbjct: 117 MQIPEFTPGTGLRSTNAIQRTTEVLQRHSHVGLRQPH-AGRLREMHTASGRPVI---GLT 172 Query: 57 AGQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL 116 + + + + P+ D S++++ + + AQ I S +L+ + Sbjct: 173 PTIVSQKTTK-VPKQPRFVARAIDN-FSREVMNAIAVAHDEAQYIAHLTIGSTNILLSLI 230 Query: 117 ESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGK 176 + I +V + L +Y +LT+ AE+GK Sbjct: 231 S---------QYICIFLLEIILNKAYKMFRAAVRRATRGAKLATLMEYGTNLTKLAEEGK 281 Query: 177 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRR 236 LDPV+GR ++I +Q+L RRTKNNP LIGEPGVGKTAI EGLAQ I G+VPE ++ + Sbjct: 282 LDPVVGRQKQIDHVVQILSRRTKNNPCLIGEPGVGKTAIAEGLAQLIATGDVPETIQQKT 341 Query: 237 VLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAG 296 V++LDMG L+AG KYRGE EERLK +L ++ + G +ILF+DE+HT+V AG A+GA+DA Sbjct: 342 VISLDMGLLLAGTKYRGELEERLKNILEEIKQ-NGEIILFLDEVHTLVTAGSAEGAIDAA 400 Query: 297 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 356 N+ KPALARGEL C+GATT++EYR++IEKDAALERRFQ V + E +V++T+ IL+GL+ER Sbjct: 401 NIFKPALARGELQCIGATTINEYRKHIEKDAALERRFQPVKIPESTVDETVGILKGLRER 460 Query: 357 YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 416 Y+ HH VQ TD A+VAAA LSH++I DR LPDKAIDL+DEA S +R++ D Sbjct: 461 YQGHHKVQYTDEALVAAAELSHKHIRDRFLPDKAIDLMDEAGSIVRLRNAQCKPSKKVND 520 Query: 417 RRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476 L E + K++ D ++ + + +Q + E + + ++L+ +T Sbjct: 521 ------------LEAELKKTLKEKNDAISIQNFRRAKQLRDHELQLRTNISALTDKKTQM 568 Query: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 536 E + + + D R + ++ +P + ++ + +L L R V E Sbjct: 569 MEPDAIAMPV----VTEDDVRHAISRWTGVPLHKVSMDESRKLLKLEEALHRRVVGQGEA 624 Query: 537 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNR 596 ++R R +L G V++ + G+ Sbjct: 625 VAAVSR----------AIRRARL------------GLKHPGRPVASLVFAGPTGVGKSE- 661 Query: 597 PIGSFLFLGPTGVGKTELCKALANFMFDS----DEAMVRIDMSEFMEKHSVSRLVGAPPG 652 L KALA + + S + AMVR+DMSE+MEKH+V+RLVG+PPG Sbjct: 662 -----------------LAKALAAYYYGSSESEEAAMVRLDMSEYMEKHAVARLVGSPPG 704 Query: 653 YVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNT 712 YV + EGG LTEAVRRRP++V+LLDEVEKAH DVF++LLQVLDDGRLTDG+GRTVDF+NT Sbjct: 705 YVWHGEGGQLTEAVRRRPHAVVLLDEVEKAHRDVFDLLLQVLDDGRLTDGKGRTVDFKNT 764 Query: 713 VVIMTSNLGSDLIQER--FGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQH 770 +++MT+N+GS LI G +K V + +FRPEF+NR+DEV++F PL E Sbjct: 765 LIVMTTNIGSSLIVNNGGDGAAAAGRIKNTVTDEMKRHFRPEFLNRLDEVIMFQPLTELE 824 Query: 771 IASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLA 830 + IA I L+ R+ E+G ++ ++D+ +L+ E G+DP YGARPL+RA+ + +E+ LA Sbjct: 825 VGKIAGIMLEEFAGRVREKGIKLKVTDKFRELVVEEGFDPSYGARPLRRAVVRLLEDTLA 884 Query: 831 QQILSGELVPGKVIRLEVNEDRIVAVQ 857 +++L+GE+ G + ++ + V+ Sbjct: 885 EKMLAGEVREGDSVIVDADSAGNAVVR 911 >UniRef50_D1Y1U8 Chaperone protein ClpB 1 n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y1U8_9BACT Length = 829 Score = 582 bits (1499), Expect = e-164, Method: Composition-based stats. Identities = 307/855 (35%), Positives = 474/855 (55%), Gaps = 28/855 (3%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M + + + A+A+++A+ D+ I LHL A+L Q+ + L AG++ Sbjct: 1 MDSSKFSQEALRVFAEAKNIAIRCDHAEITDLHLSLAILRQKESEIKYRLLEAGVDLLSY 60 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG 120 + +AL G + S+ R++ + ++++ D ++ + LA L R Sbjct: 61 ERKLTEALQDRRATPGVSK-LYYSRQYHRIVLVSGEISRASFDAYVRTPHLYLAILRDRE 119 Query: 121 TLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPV 180 + + + A T Q++ R S + +Q + L ++ + + A +G +DPV Sbjct: 120 SPSAAIAAEFGVTVESVQSMLAARLTASDELGISPEQMEQLNRFGRNFLKEAREGLMDPV 179 Query: 181 IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL 240 +GRDEEI +VL RR KNNPVLIGE GVGKTA+ EG+AQRI + P L+GR V +L Sbjct: 180 LGRDEEINECFRVLSRRLKNNPVLIGEAGVGKTAVAEGIAQRIAKQDAPALLRGRMVFSL 239 Query: 241 DMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLK 300 DM ALVAG KYRG+FEERLK +L + +G +ILF+DELHT++GAG G+MD N+LK Sbjct: 240 DMAALVAGTKYRGDFEERLKEILEIIKASKGRIILFVDELHTIIGAGSGSGSMDTSNILK 299 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELH 360 P LARGE+ +GATT++EYR+YIE D ALERRFQK+ + EPS E +++LRG+ +YE H Sbjct: 300 PFLARGEILMIGATTVEEYRRYIEPDRALERRFQKILIEEPSEEAALSMLRGVVSKYETH 359 Query: 361 HHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRII 420 H V+I D A++AA LS RYI DR LPDKAIDLIDEA + +RM +DS P+ELD +RRII Sbjct: 360 HRVRIADGALIAAIQLSKRYITDRYLPDKAIDLIDEAGAMVRMSMDSMPQELDEWNRRII 419 Query: 421 QLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELE 480 Q ++E L+ E+D A+++R L ++L+D+ +Y E W+ E L +K + Sbjct: 420 QWEMEHILLLDEADPAAQRRRQTLEKQLADERARYEERFAAWQKEVERLDELSRLKELRD 479 Query: 481 QAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVL 540 + + ++E A+ + + + K E + +VT+ EI ++ Sbjct: 480 EVRRSLEDAQEAHRVDDVKRFVAERQAFDAKIAEIERIGPHYP---VSREVTEEEIKRIV 536 Query: 541 ARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGS 600 A GIP+S + SE EKL + + L +G +AV AV +I R+R+GL RP+GS Sbjct: 537 AVRAGIPLSSIGRSESEKLEQAGKSLLAEFVGHRDAVSAVRQSILRARSGLMKRRRPVGS 596 Query: 601 FLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG 660 FL +GP+G GK+ L + A ++ + + + +M EF +K SV++L+GAPPGYVG++ G Sbjct: 597 FLLVGPSGTGKSYLAELFAKHYYEDERSPLSFNMREFTDKASVNKLIGAPPGYVGHDAAG 656 Query: 661 YLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL 720 LTEAVR RP+SVI+ + V+ A +V +++ ++ DG + D +GRTVDFRN ++ T Sbjct: 657 ALTEAVRLRPHSVIVFESVDHAGAEVLSLIARLAADGEIADNRGRTVDFRNALLFFTVTS 716 Query: 721 GSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLK 780 R + +D V F + + ++L+ Sbjct: 717 TDRDPP----------------------VRELLRDGLDGVYYFEDFSLRERRELLTLRLR 754 Query: 781 RLYKRLEERGYEIHISDEALKLLSENGYDP-VYGARPLKRAIQQQIENPLAQQILSGELV 839 L + LEE E+ + L G+D GA P+ +++ + LA + L G L Sbjct: 755 ELQRELEEEQIELSWDEATLDA-VTAGFDRAESGAHPVAGYMERTVLADLAAKKLLGRLR 813 Query: 840 PGKVIRLEVNEDRIV 854 PG + + +V Sbjct: 814 PGARVVIRTGGADVV 828 >UniRef50_Q3JL54 ATP-dependent Clp protease, ATP-binding subunit ClpB n=51 Tax=Proteobacteria RepID=Q3JL54_BURP1 Length = 1042 Score = 581 bits (1498), Expect = e-164, Method: Composition-based stats. Identities = 306/950 (32%), Positives = 451/950 (47%), Gaps = 100/950 (10%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +++L + AL A + + + HL++ L ++ V+ LL + G +A +LR Sbjct: 10 IEQLNPYCRNALESAVGACVARRHDDVAVEHLLARLCDEPSADVALLLRACGADAARLRR 69 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQ-KRGDNFISS------------- 108 + AL+ P G GG + L+ +L +A + GD I S Sbjct: 70 QADAALDARP--AGDGGRPAFAPSLLALLQDAWLIASLELGDTHIRSAAVLAAAVARAAR 127 Query: 109 -----ELFVLAALESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKK 163 VL +L +A A+GA +I D A+ + Sbjct: 128 QPSPGGDDVLQSLRKDALVARF--ASGACARSIESRASGALDAAPGEASDTRDASSAIAR 185 Query: 164 YTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRI 223 Y D T +A G +DPV GRD EIR+ + +L RR KNNPV +GEPGVGKTA+VEGLA RI Sbjct: 186 YCEDFTAKARAGGIDPVFGRDAEIRQIVDILARRRKNNPVCVGEPGVGKTAVVEGLALRI 245 Query: 224 INGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTM 283 G+VP L+G +L LD+G L AGA +GEFE+RLK V+ ++ + V+LFIDE HT+ Sbjct: 246 AEGDVPATLRGATLLGLDLGMLQAGASVKGEFEQRLKRVIAEIRASQTPVVLFIDEAHTL 305 Query: 284 VGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSV 343 +GAG A GA DA N+LKPALARGEL + ATT EY++Y EKDAAL RRFQ V + P V Sbjct: 306 IGAGGAAGASDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALARRFQPVKLDSPDV 365 Query: 344 -----------------------EDTIAILRGLKERYELHHH---------------VQI 365 +D + L RY V++ Sbjct: 366 ATSVMILRGLKERYQDAHGVTIRDDALVAAAELSARYITGRQLPDKAIDLLDTACARVKV 425 Query: 366 TDPAIVAAATLSHRYIADRQLPDKAI-DLIDEAASSIRMQIDSKPEELDRLDRR----II 420 AA + R I + +A+ D + E + ++ EL L R Sbjct: 426 RQQTKPAALEDAQRAIQALERERRALRDELAERCAPDTPRVADIDRELAALSARAGALRD 485 Query: 421 QLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELE 480 ++ A D R +D A+ A +S + + Sbjct: 486 AWAAQRDAAQALVDARRACRAAADATAATDAAGTTGTAHAGELADSADVSDIADVTKMAD 545 Query: 481 QAKIAIEQARRVGDLARMSELQYG---------------------------KIPELEKQL 513 A A A + + + Sbjct: 546 AADAAPADAETGSNARDADARMPAGTCARIAPNPDARAWPPLRAPHADARERAARALAEA 605 Query: 514 EAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQ 573 + + L+R V IA+V+A WTGI ++ +LR+ L R+ GQ Sbjct: 606 TRRFEHAQRDTPLVRIDVDPDAIADVVADWTGIAAGKLRRDRANVMLRLADTLRRRIRGQ 665 Query: 574 NEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRID 633 + A++ +S A++ AG+ DP RP+G FL GP+G GKTE A+A+ +F + ++V ++ Sbjct: 666 DHAIEQISEAVKAGAAGVHDPRRPLGVFLLAGPSGTGKTETALAVADALFGDERSIVVVN 725 Query: 634 MSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQV 693 MSEF E+H VSRL+G+PPGYVGY EGG LTEAVR+RPYSV+LLDEVEKAHPDV N+ QV Sbjct: 726 MSEFQERHDVSRLIGSPPGYVGYGEGGMLTEAVRQRPYSVVLLDEVEKAHPDVLNLFYQV 785 Query: 694 LDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE---RFGELDYAHMKELVLGVVSHNFR 750 D G L+DG+G+ VDF NTV+ +TSNLG+D+I + R D M+ V +S +F+ Sbjct: 786 FDKGSLSDGEGKEVDFANTVIFLTSNLGADIIADIAARGARPDPDAMRAAVRPALSRHFK 845 Query: 751 PEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYE-IHISDEALKLLSENGYD 809 P + R+ E+ + PL +A IA+++L+R+ R+ + I D + ++ + Sbjct: 846 PALLARMTEI-PYAPLAPDTLADIARLKLERIATRVAAQHATRIVYDDAVVAHVAARCTE 904 Query: 810 PVYGARPLKRAIQQQIENPLAQQIL--SGELVPGKVIRLEVNEDRIVAVQ 857 GAR + +Q+ + LAQ +L +G P IR+ ++ V Sbjct: 905 VESGARNVDFILQRHVLPALAQHVLVCAGNAAPMPAIRVAIDAGGRFVVS 954 >UniRef50_C9SIE3 Heat shock protein n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SIE3_VERA1 Length = 744 Score = 577 bits (1487), Expect = e-163, Method: Composition-based stats. Identities = 327/741 (44%), Positives = 456/741 (61%), Gaps = 65/741 (8%) Query: 121 TLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPV 180 A L A + G ++ G E ++ AL+++ IDLT+RA+ GKLDPV Sbjct: 40 HSAQRLPAVAFRAYASGRGPHPPGGTHRMDMGGGEPEKPALEQFGIDLTQRAKDGKLDPV 99 Query: 181 IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL 240 IGRD EI+RTIQ+L RRTKNNPVLIG G GKTAI+EGLA RI+ G+VPE +K +R Sbjct: 100 IGRDSEIQRTIQILSRRTKNNPVLIGNAGTGKTAILEGLALRIVRGDVPESVKNKR---- 155 Query: 241 DMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLK 300 + ++R + + + + ++DA N+LK Sbjct: 156 ------SSMRFR---------------RPRAKSSSSSTSYTRSLVSARPKASIDASNLLK 194 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELH 360 PALARGEL C GATTLDEYRQ IEKD AL RRFQ + V EPSV+DTI+ILRG Sbjct: 195 PALARGELQCCGATTLDEYRQ-IEKDVALARRFQPIMVNEPSVQDTISILRG-------- 245 Query: 361 HHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRII 420 I D+ LPDKAIDL+DEAAS +++Q +SKPE++ LD++I+ Sbjct: 246 --------------------IKDKFLPDKAIDLMDEAASHLKLQHESKPEDIMALDQKIM 285 Query: 421 QLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELE 480 +++E ++L KE D AS++R + L +L + + L W+ E+A + + + EL+ Sbjct: 286 TIQIELESLRKEKDVASRERREKLETDLKALQEEILGLTTRWEKERAEIEAVKNAQEELD 345 Query: 481 QAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVL 540 +AK+ ++ A+R G+ R EL+Y IP LE+++ + + L+ + VT +IA V+ Sbjct: 346 KAKVELDVAQREGNFGRAGELRYSVIPFLEEKIPKEEDKQDGS--LIHDSVTADDIAAVV 403 Query: 541 ARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGS 600 +R TGIPVS++ +KL+ ME L V GQ+EA+ AVSNA+R RAGL+ NRP+ S Sbjct: 404 SRITGIPVSKLTSGHIQKLVHMEDALQASVRGQDEAIKAVSNAVRLQRAGLSGDNRPLAS 463 Query: 601 FLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG 660 F FLGPTGVGKTELCK LA F+F ++ A+VR DMSEF EKH++SRL+GAP GYVGYE+ G Sbjct: 464 FFFLGPTGVGKTELCKKLAGFLFSTESAVVRFDMSEFQEKHTISRLIGAPSGYVGYEDAG 523 Query: 661 YLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL 720 LTEAVRR+PY+V+L DE EKAH D+ +LLQVLD+G LTD QG VDFRNT+++ TSNL Sbjct: 524 QLTEAVRRKPYAVLLFDEFEKAHRDISALLLQVLDEGYLTDAQGHKVDFRNTIIVFTSNL 583 Query: 721 GSDLIQERFGELDYAHMKE---------LVLGVVSHNFRPEFINRIDEVVVFHPLGEQHI 771 G+D++ Y ++ V+ VV+ + PEF+NRID +VF L + + Sbjct: 584 GADILVGANSSHPYTETEDGDVSPDVRKAVMDVVASAYPPEFLNRIDSFIVFKRLAKMAL 643 Query: 772 ASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQ 831 I I+L+ L RL++R +++S + L+E GYDP +GARPL R I +I N LA Sbjct: 644 RDIVDIRLRELQARLDDRRITLNVSSDVRDWLAERGYDPRFGARPLNRLITNEIGNGLAD 703 Query: 832 QILSGELVPGKVIRLEVNEDR 852 +I+ GEL G+ + + ED Sbjct: 704 RIIRGELKMGETAEVVIKEDG 724 >UniRef50_B0MPJ8 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MPJ8_9FIRM Length = 794 Score = 571 bits (1471), Expect = e-161, Method: Composition-based stats. Identities = 268/865 (30%), Positives = 406/865 (46%), Gaps = 88/865 (10%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M + T+K AL A + A+ + ++ H++ L GG +L +G+ + Sbjct: 1 MEFNGFTDKANDALNCALTCAMSMGHTYVGSEHILYGLCGSNGGVAYTVLRQSGVTCNSI 60 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG 120 + IN + + + T D + R+L +A+ G ++ + A + Sbjct: 61 ASRINALIGKGLPTQLTVSD--FTPRSRRILESAVMIARNAGKTAAGTDHILRAIMRDNE 118 Query: 121 TLADI-LKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDP 179 A + L G + + + + AL Y +LT A++GK+DP Sbjct: 119 CYASVFLHEMGISGEAVLDQGADTQKNTPQGKRNGSVLPSALSGYGRNLTMLAQEGKIDP 178 Query: 180 VIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLA 239 GR+ E R I++L RR+KNNP L+GE GVGKTAI EGLA +I G VP+ LK +++ Sbjct: 179 CFGRERETNRVIEILLRRSKNNPCLVGEAGVGKTAIAEGLAMKIAGGNVPDELKTKKIYM 238 Query: 240 LDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNML 299 LD+ +++AGAKYRG+FEERLK V +++ +GN+I+FIDE+H +VGAG A+GA+DA N+L Sbjct: 239 LDITSMLAGAKYRGDFEERLKRVFDEIR-NDGNIIVFIDEIHNIVGAGAAEGAIDAANIL 297 Query: 300 KPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYEL 359 KP LARGE+ +GATT EY++YIEKD ALERR Q V V EP+ E+T+ IL GL+ RYE Sbjct: 298 KPMLARGEIRLIGATTNAEYKKYIEKDPALERRLQPVTVNEPTEEETVTILNGLRCRYES 357 Query: 360 HHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRI 419 +H V+ITD AI AA LS RYI DR LPDKAIDLIDE ++ IR+ + +L + Sbjct: 358 YHKVKITDEAISAAVGLSVRYINDRFLPDKAIDLIDEGSAKIRLSRSGEDSVGKKLKK-- 415 Query: 420 IQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAEL 479 L E A + L +L ++E+ + A + + + Sbjct: 416 ---------LSDEKIRAINNKDFALALKLREQEKTLCANNGGYTATLTA-DDIADVVTQY 465 Query: 480 EQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEV 539 + LA + + + EK + A + L ++ + + Sbjct: 466 TGIPVRYNGNDTTKWLACLEKTLSENVIGQEKAVRAVANAVRRGRSGLSDEH-RPVGSFI 524 Query: 540 LARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIG 599 TG+ ++ + L + G +A+ R +++ + Sbjct: 525 FLGTTGVGKTKCCKE-----------LAKALFGTEKAL---------IRFDMSEYSEKHS 564 Query: 600 SFLFLG-PTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEE 658 +G P G E L + + S ++V D E Sbjct: 565 VSKLIGAPAGYVGYEDGGRLTDRVRKSPYSVVLFDEIEKAHP------------------ 606 Query: 659 GGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTS 718 DVF+ILLQVLDDGRLTD GRTVDF NTV+IMT Sbjct: 607 --------------------------DVFDILLQVLDDGRLTDSGGRTVDFTNTVIIMTG 640 Query: 719 NLGSDLIQERFGELDYAHMKEL------VLGVVSHNFRPEFINRIDEVVVFHPLGEQHIA 772 N+GS LI + L + + V G + FRPEF+ R+DEVVVF+ L Sbjct: 641 NIGSALIAKGKSRLGFGIQQRQEEISGLVKGELEKYFRPEFLGRVDEVVVFNELSCAEYK 700 Query: 773 SIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQ 832 I + L L K+ E +G S+ + L GARP+ + I + + N ++ Sbjct: 701 LICEKMLSELSKQCERQGIAFSWSERLSEKLCAEAKSRNEGARPIAKLIDKNVRNMISDG 760 Query: 833 ILSGELVPGKVIRLEVNEDRIVAVQ 857 I+SGE G I ++ +D +V+ Sbjct: 761 IISGEFSTGDGIYADIADDDSYSVR 785 >UniRef50_Q9KAV7 ATP-dependent proteinase n=3 Tax=Bacillus RepID=Q9KAV7_BACHD Length = 711 Score = 570 bits (1470), Expect = e-161, Method: Composition-based stats. Identities = 292/739 (39%), Positives = 428/739 (57%), Gaps = 77/739 (10%) Query: 120 GTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDP 179 + ++ K +T++ +Q ++ + L ++ ++T A+ G++DP Sbjct: 46 SSFDNMFKQWIGSTSSSMNGSDQPVSSIAMKSKTNHSGGGFLDQHGRNVTAEAKAGQIDP 105 Query: 180 VIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLA 239 VIGRD+E+ R IQ+L RRTKNNPVLIGE GVGKTAIVEG A+RI G VP +K + V Sbjct: 106 VIGRDQEVERLIQILCRRTKNNPVLIGEAGVGKTAIVEGFARRIAEGNVPAKMKNKEVYE 165 Query: 240 LDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGK-ADGAMDAGNM 298 L++ +LVAG YRG+FEE+++ ++ +L ++ +VILFIDE+H +VGAG ++G+MDAGN+ Sbjct: 166 LELSSLVAGTSYRGQFEEKMEQLVRELEARD-DVILFIDEIHMVVGAGATSEGSMDAGNI 224 Query: 299 LKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYE 358 LKPALARG+L +GATTL+EYR+ IEKD ALERRFQ + V EP++E + IL Sbjct: 225 LKPALARGQLQIIGATTLNEYRK-IEKDPALERRFQPITVKEPTLEAAVEIL-------- 275 Query: 359 LHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418 K + I EA + D Sbjct: 276 ------------------------------KGVRPIYEAYHHVSYPDD------------ 293 Query: 419 IIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAE 478 +A ++ SD + R L DK + + + +K Sbjct: 294 ------VLEACVRLSDRYIQDRF------LPDKAIDLMDEIGSALTLTSGPTTLDELKER 341 Query: 479 LEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAE 538 L + +QA D R ++L+ E + R + +VT A+I Sbjct: 342 LAEITKEKQQATAQEDYERAAKLRDE---------ENLLHKQMNENRAEKTEVTVADIQG 392 Query: 539 VLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPI 598 ++ + TGIPV ++ ++E+ K+ + L +VIGQ EAV+ V+ AI+RSRAGL NRPI Sbjct: 393 LIEKRTGIPVRKLQKAEQTKMKDLHNRLARQVIGQAEAVEKVAKAIKRSRAGLKPKNRPI 452 Query: 599 GSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEE 658 SF+F+GPTGVGKTEL K LA +F S EAM+R+DMSEFMEKHSVS+L+G+PPGYVG++E Sbjct: 453 -SFMFVGPTGVGKTELTKTLAQELFGSKEAMIRLDMSEFMEKHSVSKLIGSPPGYVGHDE 511 Query: 659 GGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTS 718 GG LTE VRR+PYS+ILLDE+EKAHPDV ++ LQ+L+DGRLTD QGR V F++TV+IMTS Sbjct: 512 GGQLTEQVRRKPYSIILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRAVSFKDTVIIMTS 571 Query: 719 N--LGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQ 776 N +G I F + K +L ++ F+PEF+NR+D ++ F+ L EQ + I Sbjct: 572 NAGVGVKKITVGFEKNVETQNKAGILEQINQYFKPEFLNRLDAIIEFNHLTEQDLMRIVD 631 Query: 777 IQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSG 836 + L+ L RL E+ + +S++A L + G D +GARPL+RAIQ +E+ + ++++ Sbjct: 632 LMLQDLGDRLAEQDISLTVSEKAKAQLVKIGSDRAFGARPLRRAIQDHVEDSITEKLIDE 691 Query: 837 ELVPGKVIRLEVNEDRIVA 855 E + + +V + Sbjct: 692 ESINAIHVDYDVVQQSFTF 710 >UniRef50_C7PZ63 ATPase AAA-2 domain protein n=7 Tax=Actinomycetales RepID=C7PZ63_CATAD Length = 841 Score = 567 bits (1460), Expect = e-160, Method: Composition-based stats. Identities = 303/859 (35%), Positives = 454/859 (52%), Gaps = 89/859 (10%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 LT+ + ++ A A + ++ HL+ A E +L +A ++ +L I Sbjct: 43 LTDSARELISTASQRAGQDGSSDLDTEHLLWAATQVE--PTRGILAAANVDPDRLAQTIK 100 Query: 66 QALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLA-D 124 ++L + + RVL +L++ G +I + + A E + + A Sbjct: 101 KSLPA--SGSTPSAEPGLTPAAKRVLMRAHELSRSSGSTYIGPQHILAALTEDQDSGAGH 158 Query: 125 ILKAAGATTANI-TQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGR 183 +L ++ + + R L +Y D+TE A+ GKLDPV+GR Sbjct: 159 VLNTTQVDAKDLGKRITKASRAEGMPTGPEQPSDTPTLDEYGRDMTEDAKAGKLDPVVGR 218 Query: 184 DEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMG 243 +EI +T++VL RRTKNNPVLIG+PGVGKTAIVEGLAQRI++G+VP L+G+RV+ LD+ Sbjct: 219 ADEIEQTVEVLSRRTKNNPVLIGDPGVGKTAIVEGLAQRIVSGDVPTTLEGKRVVMLDLA 278 Query: 244 ALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAG-KADGAMDAGNMLKPA 302 ALVAG+KYRGEFEERLK V++++ K + ILFIDELHT+VGAG +G+MDAGN++KPA Sbjct: 279 ALVAGSKYRGEFEERLKNVIDEVGKAADSTILFIDELHTVVGAGSGGEGSMDAGNIMKPA 338 Query: 303 LARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHH 362 L+RGEL+ +GATT+DEYR+ IEKDAALERRFQ V +AEP+VE+TI IL GL++RYE HH Sbjct: 339 LSRGELNVIGATTIDEYRKNIEKDAALERRFQPVLIAEPTVEETIEILEGLRDRYEAHHG 398 Query: 363 VQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQL 422 V+ TD A+ AAA +S RYI+DR LPDKAIDLID+A + IR++ K E + ++ +L Sbjct: 399 VKFTDEALAAAALMSDRYISDRFLPDKAIDLIDQAGARIRLRNLGKSTEAIEREDKLAKL 458 Query: 423 KLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQA 482 E R + ++ E D+ + EE E A++ + ++ + Sbjct: 459 TRE--------------RDEAVSAENYDRAKDLKARIEELNDEVATIEERREGTLKVTEK 504 Query: 483 KIAIEQARRVG-DLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLA 541 IA +RR G +A+++E + ++ +LE L + + + + V Sbjct: 505 DIAEVVSRRTGIPVAQLNEDERTRLLKLEDALHDRVVGQEEAVTAIAEAVRR-------- 556 Query: 542 RWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAI-----RRSRAGLADPNR 596 SR + + L +G+ E A++ + R R +++ Sbjct: 557 -------SRAGMGDPNRPTGSFLFLGPTGVGKTELAKALAELLFGDEDRLIRFDMSEFQE 609 Query: 597 PIGSFLFLG-PTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVG 655 LG P G E L + +++ D E + L Sbjct: 610 KHTVSRLLGSPPGYVGYEEAGQLTERVRRKPYSVILFDEVEKAHPDIFNTL--------- 660 Query: 656 YEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVI 715 LQVLDDGRLTD QGRTVDFR+TVVI Sbjct: 661 -----------------------------------LQVLDDGRLTDAQGRTVDFRHTVVI 685 Query: 716 MTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIA 775 MTSN+GS LI G+ D +++ ++ V F PEFINR+DEVV+FH LG+ + +I Sbjct: 686 MTSNIGSQLILAHMGDTD--EIRDQLMDQVRSFFPPEFINRLDEVVIFHSLGKPEMGNIV 743 Query: 776 QIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILS 835 + L +RL+ + + ++++A L E GY P +GARPL+R IQ +++N +A +LS Sbjct: 744 DLMLDSSRRRLKAQELGLEVTEKAKNWLVERGYKPEFGARPLRRTIQSELDNKVATLLLS 803 Query: 836 GELVPGKVIRLEVNEDRIV 854 G+ PG I + +D +V Sbjct: 804 GDTHPGDTIVADEADDHLV 822 >UniRef50_C9KP02 Negative regulator of genetic competence ClpC/MecB n=3 Tax=cellular organisms RepID=C9KP02_9FIRM Length = 840 Score = 566 bits (1459), Expect = e-159, Method: Composition-based stats. Identities = 298/883 (33%), Positives = 461/883 (52%), Gaps = 94/883 (10%) Query: 1 MRL-DRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQ 59 M + T++ A+ AQ A + +I H++ LL++EG L +AG+ Sbjct: 1 MNYRNHFTSRAIKAIEFAQYAARELEQDYIGTEHILLGLLHEEGSVAFAALQAAGLTFDA 60 Query: 60 LRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES- 118 + + + E + + RV+ + AQ G N+I +E +L+ LE Sbjct: 61 VMQRVEAMVAG--DAEYPSDNPYYTPRAKRVMEGAVEEAQTLGHNYIGTEHILLSLLEET 118 Query: 119 RGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQ---------RQALKKYTIDLT 169 G A++L G + + G + Q +KKY +L Sbjct: 119 EGAAAELLIGMGVDIDALQGEVLDRIDHPHPEGDGEPSRAEKAKGRQAPQLIKKYGRNLN 178 Query: 170 ERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVP 229 + A++ ++DPVIGRD+EI+R IQ+L RRTKN P+L+GEPGVGKTAI EGLAQRI+ G VP Sbjct: 179 DMAKEDRMDPVIGRDKEIQRVIQILARRTKNTPILLGEPGVGKTAIAEGLAQRIVEGSVP 238 Query: 230 EGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKA 289 L+ ++V++L + +LVAGAKYRGEFEERLKG+++++ + +G +ILFIDE+HT+VGAG A Sbjct: 239 YMLQDKKVVSLSLASLVAGAKYRGEFEERLKGLIDEVRQ-DGTIILFIDEMHTLVGAGAA 297 Query: 290 DGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAI 349 +GA+DA N+LKPAL+RGE+ +GATTLDEY++++EKDAAL RRFQ + V EPS+ED I Sbjct: 298 EGALDAANILKPALSRGEIQIIGATTLDEYKKHLEKDAALSRRFQTILVEEPSIEDAKKI 357 Query: 350 LRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKP 409 L GL+ +YE H I D AI AA LSHRYI DR LPDKAIDL+DEAAS +RM+ ++P Sbjct: 358 LMGLRGKYEAFHCAHIEDAAIEAAVRLSHRYITDRFLPDKAIDLMDEAASKVRMKQVAQP 417 Query: 410 EELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASL 469 E+L + R+ +L +E++A + D R+ +++ D+ + E+ + ++ Sbjct: 418 EKLQEIRARLEKLGVEKEAAISAQDYERAARIRDDEQKVKDELEEAKRRFEKRGKSRITV 477 Query: 470 SGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRN 529 + + + +++ + ++ +EK L + + + + Sbjct: 478 TA---------DDIADVVAQWTGVPVRQIAAKESDRLLHMEKILTRRVVGQQEAVEAVSK 528 Query: 530 KVTDAEIAEVLARWTGIPVSRMMESEREKL--LRMEQELHHRVIGQNEAVDAVSNAIRRS 587 + A + P+ + + + + L + G +A+ Sbjct: 529 AIRRARAGLKDPKR---PIGSFLFLGPTGVGKTELAKALSEALFGTEDAI---------I 576 Query: 588 RAGLADPNRPIGSFLFLG-PTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRL 646 R +++ +G P G E L + + +++ +D E Sbjct: 577 RFDMSEYMEKYAVSRMVGAPPGYVGYEEGGQLTDAVRRKPYSIILLDEIEKAHP------ 630 Query: 647 VGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRT 706 DVFN+LLQVLDDGRLTDG+GRT Sbjct: 631 --------------------------------------DVFNVLLQVLDDGRLTDGKGRT 652 Query: 707 VDFRNTVVIMTSNLGSDLIQERF------------GELDYAHMKELVLGVVSHNFRPEFI 754 VDFRNTV+IMTSN G+ L+++ + K+ VLG V H F+PEF+ Sbjct: 653 VDFRNTVIIMTSNAGATLLKKSAPALGFAVGSGDEKQEAEDAAKKRVLGEVRHIFKPEFL 712 Query: 755 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 814 NRIDE++VFHPLG + ++ I I L+ + RL E+ + +S A +L E G D YGA Sbjct: 713 NRIDELIVFHPLGREELSKIIDILLRDVRTRLAEKEIRLEVSPAAKNVLVEKGTDFKYGA 772 Query: 815 RPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857 RPLKRAIQ+ IE+ +A+ +L+ + G I++ N ++ V+ Sbjct: 773 RPLKRAIQKLIEDEIAEHLLARDFKRGDTIQVRKNGAKLDFVR 815 >UniRef50_C2MCW4 ATP-dependent Clp protease, ATP-binding subunit ClpC n=2 Tax=Bacteria RepID=C2MCW4_9PORP Length = 1011 Score = 566 bits (1458), Expect = e-159, Method: Composition-based stats. Identities = 271/743 (36%), Positives = 414/743 (55%), Gaps = 69/743 (9%) Query: 119 RGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLD 178 R + + + +G+ +++ E + ++ + AL + +L + A+ GKLD Sbjct: 291 RHEQSKVTQNSGSNPFDLSAEGESGKEEKASKKSSKRSKTPALDAFATNLNQLAKDGKLD 350 Query: 179 PVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVL 238 P+IGR +E+ R +L RR KNNPVLIGE GVGKTA+ EGLAQ + EV L+G+ + Sbjct: 351 PMIGRAKELERITHILCRRQKNNPVLIGEAGVGKTAVAEGLAQLLARDEVSYKLRGKVLY 410 Query: 239 ALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNM 298 ++D+ ++AG +YRG+FEER K +L + + GN IL DE+HT++GAG +G+MDA NM Sbjct: 411 SVDLAQMLAGTRYRGDFEERFKALLKEA-EMLGNTILLFDEIHTLMGAGSTEGSMDASNM 469 Query: 299 LKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYE 358 LKPALARG + +GATTLDEYR+ IEK+ AL RRFQKV + + E+T+ ILR Sbjct: 470 LKPALARGTIQVIGATTLDEYRRTIEKNGALARRFQKVMIEPNTPEETLEILR------- 522 Query: 359 LHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418 L RY Sbjct: 523 ----------------QLRGRY------------------------------------EE 530 Query: 419 IIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAE 478 + +AL+ ++ D + + K + +++ + Sbjct: 531 FHHVHYSDEALIAMVRLTNRYIYDRYFPDKAIDVLDEVGASMHLKGKLGESDKVASLRQQ 590 Query: 479 LEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAE 538 L + + ++A R + L+ + ++K+++ + V + +A+ Sbjct: 591 LRTYRASRDKAVRESNYDTAMTLKVQE-ELVQKEVDEELEKAHAEEAGTYLPVDEEAVAK 649 Query: 539 VLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPI 598 ++ +G+P+S + + E KL +M Q L VIGQ++A++ V AI+R+R GL RPI Sbjct: 650 TVSMMSGVPISNISQEEHAKLRQMRQTLKDIVIGQDDAINKVVKAIQRNRLGLGSDKRPI 709 Query: 599 GSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEE 658 GSFLFLGPTGVGKT L K LA +FD ++A++RIDMSE+ME +VSRLVGA PGYVGY+E Sbjct: 710 GSFLFLGPTGVGKTYLAKKLAELLFDDEDALIRIDMSEYMESFNVSRLVGAAPGYVGYDE 769 Query: 659 GGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTS 718 GG LTE VRR+PYSV+L DE+EKAHPDV+NILLQ+LDDG +T G V F+NTV+I+TS Sbjct: 770 GGQLTEQVRRKPYSVVLFDELEKAHPDVYNILLQILDDGFITAADGTHVSFKNTVIILTS 829 Query: 719 NLGSDLIQERFGELDYA--------HMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQH 770 N+G+ +++ + + + L+ + +F PEF+NR+D+ + F L ++ Sbjct: 830 NIGTRQLKDFGAGVGFRQEVQLSQTEQEALLSKQLKKHFSPEFLNRLDDTIYFASLEKED 889 Query: 771 IASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLA 830 I I ++L+ + R+ E+GY + ++ A L++ G+D YGARPL+RA++ IE+ L Sbjct: 890 IRKIVDVELRPIMARITEQGYNLVVTPSAKDKLADVGFDLEYGARPLRRALRHWIEDKLT 949 Query: 831 QQILSGELVPGKVIRLEVNEDRI 853 IL GE G +RL V+E + Sbjct: 950 DLILDGEANVGDTVRLRVSEGEL 972 >UniRef50_A8MFR5 ATPase AAA-2 domain protein n=3 Tax=Clostridiales RepID=A8MFR5_ALKOO Length = 758 Score = 562 bits (1447), Expect = e-158, Method: Composition-based stats. Identities = 298/749 (39%), Positives = 432/749 (57%), Gaps = 73/749 (9%) Query: 112 VLAALESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTER 171 L L + +K T ++ E + +R+ L Y +LT+R Sbjct: 80 FLGKLFKGSLGSFKMKEDEDIEVEETAEDKEEIFEEKAKKKKKGKKRKNLDTYGTNLTDR 139 Query: 172 AEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEG 231 A ++D VIGR++EI R +Q+L RR+KNNP+LIGEPGVGKTAI EGLA RI+ +VP Sbjct: 140 ARNKEIDRVIGRNKEIDRVVQILNRRSKNNPILIGEPGVGKTAIAEGLAGRIVEKQVPAK 199 Query: 232 LKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADG 291 L V LD+ A+VAG ++RG+FE R+K ++ + + GN+IL IDE+H ++GAG+ G Sbjct: 200 LFNAEVYLLDLTAIVAGTQFRGQFEGRMKAIIEEAQE-CGNIILVIDEVHNIMGAGEVHG 258 Query: 292 A-MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAIL 350 M+A N+LKPALARGE+ +GATTLDEYR++IEKD+ALERRFQ V V EPS Sbjct: 259 GVMNAANILKPALARGEIQVIGATTLDEYRKHIEKDSALERRFQPVLVEEPS-------- 310 Query: 351 RGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPE 410 V+ T + Y K D + EAA+ + + + Sbjct: 311 ------------VEDTIEILKGIKGYYEDYHK-----VKISDEVIEAAAKMSERYITDRY 353 Query: 411 ELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLS 470 D+ E L Sbjct: 354 LPDKAIDI------------------------------------IDEAGSRVNLRNEGLV 377 Query: 471 GTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNK 530 + +K EL+ + +A + D + ++ + + L++ +E + ++ Sbjct: 378 EIEGLKVELKAIEEKKAEAAKKNDYEKAAQYKVDECRILDR-------IEELEAEVNKSA 430 Query: 531 VTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590 +T ++A V+ WT IPV ++ E E +LL +E++LH RV+GQ +AV ++S IRR+R+G Sbjct: 431 LTVEDVAFVIESWTNIPVGKITEEEASRLLSLEEQLHRRVVGQKDAVRSLSRTIRRNRSG 490 Query: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAP 650 +P SF+F+GPTGVGKTEL +ALA +F S+EAM+R+DMSE+MEKH+VS+L+GAP Sbjct: 491 FRKKRKP-ASFIFVGPTGVGKTELVRALAEELFGSEEAMIRVDMSEYMEKHTVSKLIGAP 549 Query: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFR 710 PGYVGY++GG LT+ VRR+PYSVILLDE+EKAHPDVFN+LLQ+L+DGRLTD QGRTV F Sbjct: 550 PGYVGYDQGGQLTDKVRRKPYSVILLDEIEKAHPDVFNMLLQILEDGRLTDSQGRTVHFE 609 Query: 711 NTVVIMTSNLGSDLIQER--FGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGE 768 NTVVIMTSN G+ + FG Y ++ + FRPEF+NR+DE +VF L + Sbjct: 610 NTVVIMTSNAGTQIKSGSMGFGNRGYEALENRAKDALKETFRPEFLNRVDETIVFTQLSK 669 Query: 769 QHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENP 828 + + I ++ LK + + ++E+G I ISD + E GYD YGARPL+R IQ+ IE+ Sbjct: 670 EELREIIELMLKDVIEDVKEKGMTITISDAVKDFILEKGYDEKYGARPLRRVIQRSIEDE 729 Query: 829 LAQQILSGELVPGKVIRLEVNEDRIVAVQ 857 +A++ + VPG I++++ EDR+V + Sbjct: 730 IAEEYIKNTFVPGDHIQVDLKEDRVVLSK 758 >UniRef50_A6X7G2 ATPase AAA-2 domain protein n=64 Tax=cellular organisms RepID=A6X7G2_OCHA4 Length = 964 Score = 557 bits (1436), Expect = e-157, Method: Composition-based stats. Identities = 308/863 (35%), Positives = 456/863 (52%), Gaps = 76/863 (8%) Query: 4 DRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTD 63 DRL+ + L DA A ++ HL+ AL + + V +L ++ LR Sbjct: 116 DRLSEQGNKLLQDAAQKAGEFGRSEVDTEHLLLALTSSD--VVKTILEQFKVDVDDLRRQ 173 Query: 64 INQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES-RGTL 122 I + R T G++ S L LN + + G +++ E ++ E G Sbjct: 174 IEKEAKRGDAK--TDGEIGVSPRLKDALNRAFIASNELGHSYVGPEHLLIGLAEEGEGLA 231 Query: 123 ADILKAAGATTANITQAIEQMR-GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVI 181 A +L+ G T + Q + ++ G L +++ DLT+ A +GKLDPVI Sbjct: 232 AAMLRKLGLTPQALRQQVTKVVGKGAEEGRVETPSNTPDLDQFSRDLTKLAREGKLDPVI 291 Query: 182 GRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALD 241 GR EI TI+VL RR KNNPVLIGEPGVGKTAIVEGLAQRI+ GEVPE L+ +R++ L+ Sbjct: 292 GRAREIETTIEVLARRKKNNPVLIGEPGVGKTAIVEGLAQRIVAGEVPEALRDKRLVELN 351 Query: 242 MGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMV--GAGKADGAMDAGNML 299 + ++VAG+KYRGEFEER++ +L ++ +++ ++ILFIDE+HT+V G G +G +D N Sbjct: 352 INSMVAGSKYRGEFEERVQKILKEITEEKDSLILFIDEMHTIVGAGQGGGEGGLDIANTF 411 Query: 300 KPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYEL 359 KPALARGEL+ +GATTL+EY++YIEKDAALERRFQ V+V EP+V TI ILRGL++ E Sbjct: 412 KPALARGELNLIGATTLNEYQKYIEKDAALERRFQPVYVDEPTVAQTIMILRGLRDTLES 471 Query: 360 HHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRI 419 HH V ITD AI+AAA LS RYI R +PDKAIDLID+AA+ +++ ++P ++ L+ + Sbjct: 472 HHKVTITDEAIIAAAELSDRYITGRFMPDKAIDLIDQAAARVKISATARPVDVQELEAEV 531 Query: 420 IQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAEL 479 Q+K EQ + R L +EL K+++ EL E WK ++AS + Sbjct: 532 AQIKREQDYA---AARKQFDRAAELKKELEQKQKELDELLEIWKRDQASATAEVRA---- 584 Query: 480 EQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEV 539 I + ++ + K+ +LE++L + + +R + + V A Sbjct: 585 -DHVAQIVSKITGVPVTELTTEEKDKLLKLEEKLHERVIGQEEAIRAVADAVRLARAGLR 643 Query: 540 LARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIG 599 R + + K + + L + G +A+ R +++ Sbjct: 644 EGRGPTATFLFLGPTGVGK-TELAKTLAEVIFGDQDAI---------IRIDMSEYGERHS 693 Query: 600 SFLFLG-PTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEE 658 +G P G + L + ++V +D E Sbjct: 694 VARLVGAPPGYVGYDEGGQLTEKVRRRPYSVVLLDEIE---------------------- 731 Query: 659 GGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTS 718 KAHPDV+NILLQV DDGRLTDG+GR VDF NT++I TS Sbjct: 732 ----------------------KAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATS 769 Query: 719 NLGSDLIQER-----FGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIAS 773 NLGSD+IQ E D A K ++ V+ +FRPEFINRIDE++VFH L + I Sbjct: 770 NLGSDIIQRNLTKRGSSEFDEAKQKSELMEVLRGHFRPEFINRIDEIIVFHSLNQSEIRQ 829 Query: 774 IAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQI 833 I ++QL R+ + +G E+ + + G+ P +GAR L+R I+ Q+E LA+++ Sbjct: 830 IVELQLNRVKRTALTQGVELELDVSVVDHFGAVGFRPEFGARELRRLIRSQLETELAREM 889 Query: 834 LSGELVPGKVIRLEVNEDRIVAV 856 LSG + G +R+ +ED V Sbjct: 890 LSGRIEDGDKVRVAWSEDEQRVV 912 >UniRef50_A5IMI3 ATPase AAA-2 domain protein n=8 Tax=Thermotogaceae RepID=A5IMI3_THEP1 Length = 791 Score = 556 bits (1433), Expect = e-156, Method: Composition-based stats. Identities = 285/862 (33%), Positives = 456/862 (52%), Gaps = 78/862 (9%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 L+ T K Q + Q + + + H++ A+L + LL ++ +L Sbjct: 2 FNLEEYTEKAQKVMMSIQDIMTRYRQNQLSSEHILLAILEEGNNVGVELLKELNVDINRL 61 Query: 61 RTDINQALNRLPQVEGTG---GDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALE 117 + ++ + + G + + D V+ + A++ GD+ I +E +L + Sbjct: 62 KDEVEVFIGKYGVRVPEGASVSQIFITPDARHVIEKAREEARRMGDSKIGTEHLILGMVL 121 Query: 118 SRGTLA-DILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGK 176 S + A IL G T + +AI ++R + +AL ++T+DLT+ A + K Sbjct: 122 SPDSTAFRILSRYGVTPERVYEAIRKIRS---TGKTDEAENVEALARFTMDLTQLAREKK 178 Query: 177 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRR 236 L PV+ R++EIRR IQ+L RRTKNNPVLIG+PGVGKTA+VEGLAQRI+ G+VP L+ R Sbjct: 179 LMPVVDREKEIRRVIQILSRRTKNNPVLIGDPGVGKTAVVEGLAQRIVEGKVPLFLRNVR 238 Query: 237 VLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAG 296 VL LDMG LVAG ++RG+FEERLK +L++L +++G VILFIDE+HT+VGAG A+GA+DA Sbjct: 239 VLKLDMGRLVAGTRFRGDFEERLKRLLDELKRKKGEVILFIDEVHTVVGAGAAEGALDAA 298 Query: 297 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 356 N++KP L GE+ +GATT++EYR+YIEKD ALERRFQ V V EP+VE TI IL+GL++ Sbjct: 299 NIMKPELTTGEIQIIGATTVEEYRKYIEKDRALERRFQPVIVEEPTVEQTIEILKGLRKV 358 Query: 357 YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 416 +E HHHV+ITD A+ AA LS RYI +R LPDKA+DLIDEAA+ +R++ Sbjct: 359 FEEHHHVKITDDALETAAKLSARYITNRFLPDKAVDLIDEAAAYVRLESS---------- 408 Query: 417 RRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476 +L ++ + ++ + + EE + + + L+ E++ ++ + + Sbjct: 409 YPSEELLKLEEEIKNLEEKINDAVVKGEYEEAAKLKVELQRLKNEYEEKRKKQEKVEPVV 468 Query: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 536 E I + ++R+ E + K+ +LE+ + + + ++++ + A + Sbjct: 469 D--ENVVARIVEQWTGIPVSRIMESEREKLLKLEEFIHQRLVNQEEAVKIVARTIRRARV 526 Query: 537 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNR 596 R I V + + + L + G +A R +++ Sbjct: 527 GIKNPRRP-IGVFLFLGPTGVGKTELARTLADVLFGSEDA---------MIRLDMSEYME 576 Query: 597 PIGSFLFLG-PTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVG 655 +G P G E L + +++ +D E Sbjct: 577 KHSVARLIGAPPGYVGYEEGGQLTEAVRKRPYSVILLDEIEKAH---------------- 620 Query: 656 YEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVI 715 PDVFNILLQV +DGRLTDG+G TVDFRNT++I Sbjct: 621 ----------------------------PDVFNILLQVFEDGRLTDGKGNTVDFRNTIII 652 Query: 716 MTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIA 775 MTSN+GS+ I E ++ + + + F+PEF+NRID +V F PL + + I Sbjct: 653 MTSNIGSEKILEMSENG----VRIEIERELRNTFKPEFLNRIDAIVYFKPLTMEEVKKIV 708 Query: 776 QIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILS 835 +I +++L + L+E+ I +++ A L+E GY P GARPL+R I+ ++E+ +A +IL Sbjct: 709 EIMVRQLQEILKEKNISIELTERAKDYLAEAGYVPSLGARPLRRIIELELESMIADKILE 768 Query: 836 GELVPGKVIRLEVNEDRIVAVQ 857 GE+ G + ++ +E + + Sbjct: 769 GEIKEGDRVLVDADEYGLKIER 790 >UniRef50_UPI000185C840 putative chaperone protein n=1 Tax=Capnocytophaga sputigena ATCC 33612 RepID=UPI000185C840 Length = 825 Score = 556 bits (1432), Expect = e-156, Method: Composition-based stats. Identities = 273/861 (31%), Positives = 442/861 (51%), Gaps = 53/861 (6%) Query: 1 MRLDRLT--NKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAG 58 M +L+ + AL AQ +A + N HL+ A+LN++ + LL S G++ Sbjct: 1 MEEKKLSYAPEVTKALEIAQKIARENMNARYSGGHLLKAVLNRDLPLL-KLLESKGVDVF 59 Query: 59 QLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES 118 L + + T P + + + + + + + IS +A Sbjct: 60 YLEEWAEVRIEEALKATNTYSC-DPDEVIDTIFTEAEAIREILDEEEISLWDVFIALSTQ 118 Query: 119 R-GTLADILKAAGATTANITQAIEQMRGGESVNDQGAE---DQRQALKKYTIDLTERAEQ 174 D +K T A + + A + L+KY ++ + + Sbjct: 119 GVAFNFDQMKTYPVTRAELLETTPLPAASAEKPFSSAPLSSTAKGFLQKYCVNKKDVLKA 178 Query: 175 GKLDPV-IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLK 233 + +GR E ++ ++L R +K N ++IG+ G+GKT ++ Q++I+ +VP+ L Sbjct: 179 KASKEIPVGRVAETQKITEILCRFSKQNVLIIGDSGIGKTTLINSFVQKVISNQVPDVLS 238 Query: 234 GRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAM 293 V LDMGAL+AGA Y+GE E+R+K + +L + +L I+ELH ++G Sbjct: 239 NLAVFELDMGALIAGASYKGEIEDRIKNIAQELKQYP-KSVLIIEELHALLG---NSFDS 294 Query: 294 DAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGL 353 N+LK L +G L +G +T+DE+ + IEK + LE F+KV + E E +LR Sbjct: 295 SMANLLKSELTKG-LTVIGTSTIDEFTKKIEK-SGLEPLFEKVELQESDDETHFRMLRQT 352 Query: 354 KERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELD 413 YE HHH+ ITD AI A LS RY+ ++ LP AIDLID S ++ S +E + Sbjct: 353 LSAYENHHHIAITDEAIWEAIRLSKRYLKEKSLPASAIDLIDHTMSVVKTAGASFLKEKN 412 Query: 414 RLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQ 473 L +II L + + + W L+ + Sbjct: 413 ALLTQIIH----------------------LEDNTQGFTEEQRKKNAAW-----LLNDIK 445 Query: 474 TIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTD 533 L A +E+ + + L YG+ E + A + R+ +T+ Sbjct: 446 QRIPFLLDASTLLEEEQTTTFETADNLLSYGRKLITEAEKVAQEK---------RSHITE 496 Query: 534 AEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLAD 593 ++A ++++ T IP+ ++ E E+++L M+ L RV+GQ+ A+ +S A+ +R+GL+ Sbjct: 497 WDLAVLISQKTNIPIGKLKEEEKQRLSDMDAILSERVVGQDHAIAIISEAVLENRSGLSK 556 Query: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGY 653 +PIGSF FLGPTG GKTEL K+LA F+F + A++R DMSEF E+HS + L GAPPGY Sbjct: 557 AGQPIGSFFFLGPTGTGKTELAKSLAEFLFQDENAIIRFDMSEFKEEHSAALLYGAPPGY 616 Query: 654 VGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTV 713 VGYEEGG L +R++PYS++L DE+EKAH VF++ LQ++D+G+L D G+ DF N + Sbjct: 617 VGYEEGGLLVNKIRQKPYSIVLFDEIEKAHASVFDVFLQIMDEGKLHDRLGKEGDFSNAI 676 Query: 714 VIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIAS 773 ++ TSN+GSD I + F E +L ++S FRPEF+ R+ E+V F P+ +++ Sbjct: 677 ILFTSNIGSDFIVKSFTE-GNIPSSSTLLEIMSRYFRPEFLGRLTEIVPFAPISKENALK 735 Query: 774 IAQIQL-KRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQ 832 I +I L K L E ++I+ E + L+E GYD YGARPLK I+ ++ PLA++ Sbjct: 736 IFEIHLKKELLNLTEGINISLNIAQEVKEHLAEQGYDATYGARPLKGIIRAKLRRPLAKK 795 Query: 833 ILSGELVPGKVIRLEVNEDRI 853 +++GE G I + + + Sbjct: 796 LVAGEFKEGDTIEVLWENNEV 816 >UniRef50_A8JF08 ClpB chaperone, Hsp100 family (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8JF08_CHLRE Length = 692 Score = 549 bits (1413), Expect = e-154, Method: Composition-based stats. Identities = 315/704 (44%), Positives = 438/704 (62%), Gaps = 38/704 (5%) Query: 154 AEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKT 213 +E AL +Y DLT A +LDP+IGR +E+R+ VL RRTKNNPV++GE GVGKT Sbjct: 3 SEPTPTALSRYGRDLTALARARQLDPLIGRTDELRKLFNVLCRRTKNNPVVLGESGVGKT 62 Query: 214 AIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNV 273 A+VEGLAQRI G+ P LKG ++ALD+G L+AGA + GEFE+R+ VL +L+ Sbjct: 63 ALVEGLAQRIAAGDCPPALKGAAIIALDLGMLMAGATFPGEFEQRMSAVLKELS-----C 117 Query: 274 ILFIDELHTMVGAGKADGA--MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALER 331 ILFID++H + G G DA +LKP LARGEL C+GATT D++R++IEKD ALER Sbjct: 118 ILFIDDIHNVTGPNAQQGGGVNDASMLLKPLLARGELRCIGATTPDKFRRFIEKDPALER 177 Query: 332 RFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAI 391 RFQ++ +A+P+ + ++ILRGL RYE H ++ITD A+VAA LSHRY ADR LPDKAI Sbjct: 178 RFQQLHIAQPTPPEAMSILRGLGARYEKHPALRITDAALVAAVELSHRYTADRFLPDKAI 237 Query: 392 DLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDK 451 DL+DEAA+ +++ +D +P LDR+ RRI QL+ E++ L + AS R D L L++ Sbjct: 238 DLVDEAAARVKLDLDQRPAVLDRIIRRIGQLEAERKLLRRS---ASVDRRDALR--LTEL 292 Query: 452 ERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEK 511 E + L + A++ Q+ + + R G + E Sbjct: 293 EAELGALRRQRDDMTAAVDVQQS------EVRREECVGGRGGVVPDYEPNSTQNSEEESA 346 Query: 512 QLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVI 571 T+ G L V +A E+ A G + + E + ++E R+I Sbjct: 347 AYALTTRGNGGKREGL--CVLEALHEELEAEEAGRSEAALA--EGADRPKTDKERIARII 402 Query: 572 GQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVR 631 GQ EAV AV++AI RSRAGL DPN PI SFLFLGPTGVGKTEL KALA +F++++AMVR Sbjct: 403 GQEEAVSAVADAIHRSRAGLKDPNGPIASFLFLGPTGVGKTELAKALAAQLFNAEDAMVR 462 Query: 632 IDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEV-----EKAHPDV 686 +DMSE+MEKH+VS+L+GAPPGYVG++EGG LTEAVRRRPY+V+L DE+ P Sbjct: 463 LDMSEYMEKHAVSKLIGAPPGYVGFDEGGQLTEAVRRRPYTVVLFDELIINPPSHIRPSP 522 Query: 687 FNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAH---------- 736 + + QGRTV F++T++IMTSNLGS I + Sbjct: 523 YALNPSPTHPPTSPSHQGRTVSFKHTIIIMTSNLGSSEIYKATAGRARTQLAATPLAADS 582 Query: 737 -MKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHI 795 +++LV+ V +F PEF+NR+DE ++F PL I S+ ++L+ L RL E+ + + Sbjct: 583 NIRDLVMDQVRRHFPPEFLNRVDEFIIFEPLTAVQIRSVVALRLRGLVSRLAEKKVRLVL 642 Query: 796 SDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELV 839 +D A+ L+ G+DP++GARP+KRAIQ+++E PLAQ +L G+ Sbjct: 643 ADSAMDHLAAKGFDPIFGARPVKRAIQRELETPLAQALLRGDFE 686 >UniRef50_A4FF35 Clp protease ATP binding subunit n=7 Tax=Bacteria RepID=A4FF35_SACEN Length = 838 Score = 546 bits (1406), Expect = e-153, Method: Composition-based stats. Identities = 304/867 (35%), Positives = 444/867 (51%), Gaps = 92/867 (10%) Query: 4 DRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTD 63 + +T K Q LA A A G + ++ LH++ A + +L ++ Sbjct: 39 ELMTQKTQELLAGAADYARGLGHDDLDALHVLWAATKEATT--REMLEGVQVDPDTFAET 96 Query: 64 INQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLA 123 + + L + + +VL ++A+ G +I E +LA S + A Sbjct: 97 VQRQLPAAREAASRA--PALTPAGRKVLVDAYQVARALGSTYIGPEHVLLAMSASPDSEA 154 Query: 124 -DILKAAGATTANITQAIEQMRGGESVNDQGAEDQR---QALKKYTIDLTERAEQGKLDP 179 +L +AGAT + R E+ Q ++ L KY DLT RA G+LDP Sbjct: 155 GRLLASAGATPEEFRVSAGGARRSEAATGQATAERDSGTPTLDKYGQDLTARARDGELDP 214 Query: 180 VIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLA 239 V+GR +EI +TI+VL RRTKNNPVL+GE GVGKTAIVEG+AQRI +G+VP L G+R++ Sbjct: 215 VVGRADEIEQTIEVLSRRTKNNPVLVGEAGVGKTAIVEGIAQRIADGQVPHVLTGKRIVQ 274 Query: 240 LDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNML 299 LD+ +++AG +YRG+FEER+ V+++++ G VI+FIDELHT+VGAG A+GA+DAGNML Sbjct: 275 LDLSSMLAGTRYRGDFEERMTKVIDEISANSGEVIVFIDELHTLVGAGGAEGAVDAGNML 334 Query: 300 KPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYEL 359 KP LARGELH VGATTLDEYR+ IEKDAALERRFQ V V EPSVEDTI +L L++RY Sbjct: 335 KPRLARGELHVVGATTLDEYRKNIEKDAALERRFQPVQVPEPSVEDTIEVLDRLRDRYAE 394 Query: 360 HHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRI 419 HH V+ TD A+ AAA LS RYIADR LPDKAIDL+D+A + R+ + D L++RI Sbjct: 395 HHRVRYTDEAVAAAARLSDRYIADRFLPDKAIDLLDQAGARKRLSV--VGPSADELEQRI 452 Query: 420 IQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAEL 479 +L+ E+ + + D +R L +E+ + + + + Sbjct: 453 QRLEREKDRSVADEDY---ERASALRDEIGVAQAELEANRDA------------GVPEVT 497 Query: 480 EQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEV 539 E + ++R++E + ++ LE +L + +R L V + Sbjct: 498 ESDIAEVVSRATGVPVSRLTEQERTRLRNLEGELHRRVIGQDDAVRALARAVRRSRSGVG 557 Query: 540 LARWTGIPVSRMMESEREKL--LRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLAD-PNR 596 A PV + + + + L + G + R R +++ R Sbjct: 558 NANR---PVGSFLFLGPTGVGKTELAKALAETLFGDED---------RMIRLDMSEFQER 605 Query: 597 PIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGY 656 + L P G L + ++V +D E Sbjct: 606 HNAARLIGAPPGYVGYGEAGELTEAVRRRPYSVVLLDEVEKAHPD--------------- 650 Query: 657 EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 716 VFN LLQVL+DGRLTDGQGRTVDF NTVVIM Sbjct: 651 -----------------------------VFNTLLQVLEDGRLTDGQGRTVDFTNTVVIM 681 Query: 717 TSNLGSDLIQERFGELDYAHMK--------ELVLGVVSHNFRPEFINRIDEVVVFHPLGE 768 TSNLGS++I + G L ++ + + ++ + FRPEF+NRIDEVVVF L Sbjct: 682 TSNLGSEVISSKSGGLGFSAAQDEADESLHDRLMPRLKEAFRPEFLNRIDEVVVFRKLTA 741 Query: 769 QHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENP 828 + + IA + L KRL I D A+ L++E G+ P +GARPL+R I++ +++ Sbjct: 742 EQLHDIADLLLDGTRKRLAAMEIGIGFDDAAVDLIAERGHQPEFGARPLRRTIERDVDDR 801 Query: 829 LAQQILSGELVPGKVIRLEVNEDRIVA 855 +A +L GEL G + + V + ++ Sbjct: 802 IADLVLDGELEAGSAVHVGVRDGQLTF 828 >UniRef50_A5FES3 ATPase AAA-2 domain protein n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FES3_FLAJ1 Length = 819 Score = 544 bits (1400), Expect = e-153, Method: Composition-based stats. Identities = 258/863 (29%), Positives = 449/863 (52%), Gaps = 57/863 (6%) Query: 1 MRLDR--LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAG 58 M ++ + + AL A+ +A + N++ HL+ A+LN++ + L + G + Sbjct: 1 MEEEKNVFSAELLSALEIAKKIAKTNLNKYYSASHLLKAVLNRDLSLLKR-LEAMGKDVY 59 Query: 59 QLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL-E 117 L + P+ D +PS + ++ + + ++ IS ++A Sbjct: 60 YLDEWAEVRIEEEPKTTHVL-DAEPSDLIDEIIKEAESVRIALNEDEISLYAVIIALSSP 118 Query: 118 SRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKL 177 G D +K+ + + + + ++ + E ++ L KY I + K Sbjct: 119 GVGFNFDQMKSYPISRNELLEDQIVIP--QTESGAKQEVKKGFLSKYCIHKN-LEKNKKR 175 Query: 178 DPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRV 237 P IGR+ E+ ++L R +K N +LIG+ G+GK+ +++ L Q +I +VP+ L ++ Sbjct: 176 IPAIGREAELNAIKEILCRFSKPNVLLIGDRGIGKSILIDTLVQNVITNQVPDALNKVQL 235 Query: 238 LALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGN 297 LD+ +L+AGA Y+GE E+RLK + +L + +++ + K G N Sbjct: 236 FELDLSSLIAGASYKGEIEDRLKNCIQELKQYPRAILIIE---EIHILLDKNGGDSGVSN 292 Query: 298 MLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERY 357 +LK LA+G L+ + +T+DE+ + IEK+ L F+ V + E E ++R + Y Sbjct: 293 VLKGELAKG-LNIIATSTIDEFSKRIEKEQGLSGMFEIVKLEESDDETLFRMIRESIKTY 351 Query: 358 ELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDR 417 + HH +QI D I + LS RY+ ++ LP+ AI+LID S ++ ++ E + Sbjct: 352 QEHHKIQIDDETISESIRLSRRYLKEKSLPESAINLIDHTMSVLKTSGETFLNEKQSIIN 411 Query: 418 RIIQLKLEQQALMKES--DEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTI 475 R+ LK L ++ E + +D++N+ + + ++ ++ L+ + + Sbjct: 412 RLNLLKENTSNLSEDQLIKEYNWFLVDLINKTTFLMDVDEQNEKRNFETSESILNYIENL 471 Query: 476 KAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAE 535 LE EK L+ + +E + L Sbjct: 472 IKTLE-----------------------------EKALDKRSHIEAFDLSL--------- 493 Query: 536 IAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPN 595 ++A+ TGIP ++ E E++KL +E+ L+ RVIGQ+ + V+ +I +R+GL+ Sbjct: 494 ---IIAKKTGIPAGKLKEEEKQKLNNIEEVLNRRVIGQDHCIATVAGSILEARSGLSKAG 550 Query: 596 RPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVG 655 +PI SF FLGPTG GKTEL K+LA F+F + A++R DMSEF E+HS + L GAPPGYVG Sbjct: 551 QPIASFFFLGPTGTGKTELAKSLAEFLFQDENAIIRFDMSEFKEEHSAALLYGAPPGYVG 610 Query: 656 YEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVI 715 YEEGG L +R++PYS++L DE+EKAHP VF++ LQ++D+G+L D G+ DF N +++ Sbjct: 611 YEEGGLLVNKIRQKPYSIVLFDEIEKAHPSVFDVFLQIMDEGKLHDRLGKEGDFSNAIIL 670 Query: 716 MTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIA 775 TSN+G+D I F + ++ ++ + FRPEF+ R+ E+V F P+ +++ I Sbjct: 671 FTSNIGADHIVNTFNNGE-IPTSGSLMEIMGNYFRPEFLGRLTEIVPFAPISKENALKIF 729 Query: 776 QIQL-KRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQIL 834 +I L K L+ ++ I EA L+ENGY+ YGARP+K I+ + PLA++I+ Sbjct: 730 EIHLKKEFMDLLKNINIKVEIPMEAKLYLAENGYNAKYGARPIKSIIRSHLRRPLAKKII 789 Query: 835 SGELVPGKVIRLEVNEDRIVAVQ 857 SGE+ G I + + + + V+ Sbjct: 790 SGEVKDGDTISVTIENNEVKWVK 812 >UniRef50_Q025Q2 ATPase AAA-2 domain protein n=12 Tax=Bacteria RepID=Q025Q2_SOLUE Length = 823 Score = 542 bits (1396), Expect = e-152, Method: Composition-based stats. Identities = 275/868 (31%), Positives = 425/868 (48%), Gaps = 89/868 (10%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 +R T K + + A+ A + +IE HL+ LL ++ + L S +R Sbjct: 1 MFERYTEKARRVIFFARYEASQFGSPYIETEHLLLGLLREDKALANRFLRS-HAAVESIR 59 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG- 120 I + + T D+ S + RVL + A++ I +E +L L Sbjct: 60 KQIEGH-TTIREKVSTSVDLPLSHECKRVLAYGAEEAERLSHKHIGTEHLLLGLLREEKC 118 Query: 121 TLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPV 180 A+IL G + I + + R + L +++ DLT+ A LDP+ Sbjct: 119 FAAEILHERGLRLSTIREEL--ARSQSEKVASARPKESSLLAEFSRDLTQAAMDNTLDPL 176 Query: 181 IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL 240 IGRD E+ R +Q+L RRTKNNPVLIGEPGVGKTAIVEGLAQRI G+VP L +R+LAL Sbjct: 177 IGRDYELERVVQILCRRTKNNPVLIGEPGVGKTAIVEGLAQRIAEGDVPSFLADKRILAL 236 Query: 241 DMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLK 300 D+ +VAG KYRG+FEERLK ++ +L + + N I+FIDELHT+VGAG A+G++DA N+LK Sbjct: 237 DLSLIVAGTKYRGQFEERLKTIMKELMENQ-NAIIFIDELHTLVGAGSAEGSLDAANILK 295 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELH 360 PAL+RGE+ C+GATT E+R+ IEKD +LERRFQ V V P+ D I IL G+K+RYE Sbjct: 296 PALSRGEIQCIGATTPAEFRKSIEKDRSLERRFQAVKVPPPNESDAIKILFGIKDRYEKF 355 Query: 361 HHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRII 420 H V TD AI AA S RYI DR LPDKAIDLIDEA + ++++ + P +L + +RI Sbjct: 356 HAVAYTDDAIEAAVYTSSRYIPDRYLPDKAIDLIDEAGARVKLRQTTLPADLADIQKRIK 415 Query: 421 QLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELE 480 + + + + E + EK +L + T + Sbjct: 416 FIVHRMENAIANHEFE--------KARFYSDEERKERENMRLLREKYNLDDSSTGCVTKD 467 Query: 481 QAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVL 540 + + + E + K+ +E++L + K + L + + Sbjct: 468 DI-EDVVARWTGVPMTSIKEEEIAKLLRIEEELHKRVISQEKAISALARAIRRSRAGLKA 526 Query: 541 ARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRS-----RAGLADPN 595 + P + L +G+ E A++ + S R +++ Sbjct: 527 SNR---PAGSFL------------FLGPTGVGKTEVARALAGFLFGSEKSLVRFDMSEYM 571 Query: 596 RPIGSFLFLG-PTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYV 654 +G P G E L + + +++ +D E Sbjct: 572 EKHSVSKLIGSPPGYVGYEEGGQLTERVKRNPYSIILLDEIEKAHP-------------- 617 Query: 655 GYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVV 714 D++NILLQV +DG+LTDG G VDF+NT++ Sbjct: 618 ------------------------------DIYNILLQVFEDGQLTDGLGNQVDFKNTII 647 Query: 715 IMTSNLGSDLIQERF--------GELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPL 766 IMTSNLG+ +++R GE ++++V V F PEF+NR+DEV++F L Sbjct: 648 IMTSNLGARFLEKRGNLGFSIPAGEAGSTKVEDMVRSEVKKAFNPEFLNRLDEVILFMSL 707 Query: 767 GEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSEN-GYDPVYGARPLKRAIQQQI 825 + + I ++ ++++ L + +IH++ +A K + E D YGARPL+RA+Q+ I Sbjct: 708 TDPDLIQIMELLVQQVNVNLVAKQVKIHLAPDAAKYILEKTCADRSYGARPLRRALQKYI 767 Query: 826 ENPLAQQILSGELVPGKVIRLEVNEDRI 853 E+PL++ ++ G L + + + + I Sbjct: 768 EDPLSEALIQGTLPRPADLEVYLGDTGI 795 >UniRef50_A9BF41 ATPase AAA-2 domain protein n=14 Tax=cellular organisms RepID=A9BF41_PETMO Length = 830 Score = 539 bits (1387), Expect = e-151, Method: Composition-based stats. Identities = 291/878 (33%), Positives = 442/878 (50%), Gaps = 107/878 (12%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 D T + +AQ+ A + ++ H++ LL GG + + + ++ Sbjct: 1 MFDNFTERAAKVFIEAQNEAKQMGHPYVGTEHILLGLLKVGGGHLDTVFEEFNLYYNSIK 60 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES-RG 120 +I + +G G QP+ R+L L ++ G N I +E +L G Sbjct: 61 MEITNVVGTNST-QGIIGSPQPTPRAKRILELAYDESELMGFNKIDAEHLLLGICREAEG 119 Query: 121 TLADILKAAGATTANITQAIEQMR--------------GGESVNDQGAEDQRQALKKYTI 166 + ILK +G + + + M + ++ + L++Y Sbjct: 120 IASHILKRSGINLTLMRKELTDMMIKGRSTGRMEIAKTEELEERKRQKQNALKQLEEYGT 179 Query: 167 DLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIING 226 DLT +AE KLDP+IGR+ EI R +++L RR KNNPVLIGE GVGK+A+VEGLAQRI+ G Sbjct: 180 DLTAQAENRKLDPIIGREIEINRIMEILARRKKNNPVLIGEAGVGKSAVVEGLAQRIVEG 239 Query: 227 EVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGA 286 VPE LK + + +LD+ ++VAG KYRGEFE+R+K ++ L K E ++ILFIDELH +V A Sbjct: 240 RVPEILKNKTIFSLDITSIVAGTKYRGEFEKRMKKLMQILQKTE-DIILFIDELHMIVEA 298 Query: 287 GKADG-AMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVED 345 G A+G +MDA N+LKPALA GE+ +G+TT +EYR++IEKD ALERRFQK++V EP++E+ Sbjct: 299 GAAEGSSMDAANVLKPALANGEITVIGSTTANEYRKFIEKDPALERRFQKIYVTEPTIEE 358 Query: 346 TIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQI 405 TI IL G+K +YE HH V+ AI +A LS RYI DR LPDKAID+IDEA + R+ Sbjct: 359 TINILSGIKFKYEEHHKVKYNHGAIQSAVQLSVRYITDRHLPDKAIDVIDEAGAKARLSA 418 Query: 406 DSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAE 465 + P++L +I ++ KR D ++E +++ + + + E + Sbjct: 419 LTLPDKLKIQYEKIADIE--------------SKRNDPNSKENVEEKLKKMKEKYEEEYS 464 Query: 466 KASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMR 525 K I E+ I L ++ + K+ LE L + + ++ Sbjct: 465 KWRSEAENKIIQITEEDIAEIISNWTGVPLRQLRAEEMEKLLNLEAVLHERVVGQDEAIK 524 Query: 526 LLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIR 585 + + A R + + + L +G+ E ++ + Sbjct: 525 SVAKAIRRA---------------RSGLKDPRRPTGVFMFLGPTGVGKTELAKTLATYLF 569 Query: 586 -----RSRAGLADPNRPIGSFLFLG-PTGVGKTELCKALANFMFDSDEAMVRIDMSEFME 639 R +++ +G P G + L + +++ +D E Sbjct: 570 GNETHLVRIDMSEYMEKFSVSRLVGAPPGYVGYDEGGQLTEIVRRRPYSVILLDEIEKAH 629 Query: 640 KHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRL 699 DV+NILLQ++D+GRL Sbjct: 630 --------------------------------------------TDVYNILLQIMDEGRL 645 Query: 700 TDGQGRTVDFRNTVVIMTSNLGSDLI----------QERFGELDYAHMKELVLGVVSHNF 749 TD QGRTVDFRNT++IMTSNLGS+ I +E E +Y +KE V+ V F Sbjct: 646 TDSQGRTVDFRNTIIIMTSNLGSEQISKTKRSLGFVEEGTIESEYKDIKEQVMSAVKAAF 705 Query: 750 RPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYD 809 +PEFINR+D+V+VFHPL + + +I IQL L RLEER + + + A+ L E GYD Sbjct: 706 KPEFINRLDDVIVFHPLTKNQLKNIISIQLSDLKSRLEERNLTLSVKESAIDFLLEKGYD 765 Query: 810 PVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLE 847 V+GARPLKRAIQ+ IE+PL++++L G+ G I + Sbjct: 766 SVFGARPLKRAIQRYIEDPLSEELLKGKYEEGDKILVT 803 >UniRef50_D1QW31 Chaperone protein ClpB n=1 Tax=Prevotella oris F0302 RepID=D1QW31_9BACT Length = 815 Score = 529 bits (1362), Expect = e-148, Method: Composition-based stats. Identities = 241/855 (28%), Positives = 422/855 (49%), Gaps = 49/855 (5%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M + A+ A+++A + HL +A++ ++ G + +LTS + + Sbjct: 1 MNEQNYSTSLLAAIKLAKAMARQDKHHSYGVAHLATAMMTEQTG-LREILTSMQKDVAYI 59 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG 120 + D+ ++ VL+ ++ K G +++ + A + Sbjct: 60 MDWFDTHKEMYISSGNEASDIIADGEVKLVLDEAERSKIKLGTDYVDALCVFTAIVRDGV 119 Query: 121 TLADI-LKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDP 179 + ++ G + +I + G S G E + + +Y DL + Sbjct: 120 VYSHQQIEGLGVSEEDIL---DYFNAGASPFSIGEEQEMPSSIQYASDLKRPEILEEGKT 176 Query: 180 VIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLA 239 +IGR +E+R ++ L+R +L+G PG+GKTAIV+ LA + + + E + ++ Sbjct: 177 IIGRSKEVRLILENLERAENKAVLLVGAPGIGKTAIVKALAHEVASNK-DELINQTALVN 235 Query: 240 LDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNML 299 L+ ++A E +++ +L L + +L ID+L ++ G A N+L Sbjct: 236 LNTPKILAQTSSEAEVGQKITALLQKLNPSKTKAVLVIDDLQMLLENGNTSNATSLINIL 295 Query: 300 KPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYEL 359 ++ G + V + D YR++IEK + R + V + + L G K + + Sbjct: 296 DAQISEGTVTLVMLLSTDAYRKHIEKHPIVN-RLNVINVEQLEPNILKSALLGHKTQLQA 354 Query: 360 HHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRI 419 H+ + +T+ AI +A +L++RY ++ P +DL+D A+S+R+ + E + +L Sbjct: 355 HYSLAVTEEAIDSACSLANRYYKEKSQPASTLDLLDSTAASVRLSNKNAQETITQLTETY 414 Query: 420 IQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAEL 479 + + + L+ + S + + L+ T + +L Sbjct: 415 QKYC---------KQPIEEVKDRDLHLLYHTIFSKISVVLISKIVDNFILTDEDTTQQKL 465 Query: 480 EQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEV 539 E KI + K+L + V+ E+ V Sbjct: 466 E------------------------KIGLILKELAEVSAK-------GMQAVSPLEVEAV 494 Query: 540 LARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIG 599 +A TGIP+ ++ E+++LL +E +L RV GQN+A+ +++AI SR+GL+DP +PIG Sbjct: 495 VAGDTGIPIGKIQAQEKDRLLGIETKLCERVKGQNKAITTLADAIIESRSGLSDPKKPIG 554 Query: 600 SFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEG 659 SF FLGPTG GKTEL K+LA +FD D AM+R DMSEF E+HS + L GAPPGYVGYEEG Sbjct: 555 SFFFLGPTGTGKTELTKSLAELLFDDDSAMIRFDMSEFKEEHSAALLYGAPPGYVGYEEG 614 Query: 660 GYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSN 719 G L +R++PYSV+L DE+EKAH V+++ LQ++D+G++ D GR DF N+++I TSN Sbjct: 615 GLLVTKIRQKPYSVVLFDEIEKAHSSVYDVFLQMMDEGKIHDKLGREGDFSNSIIIFTSN 674 Query: 720 LGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQL 779 +GS I ++ E EL+ +S FRPEF+ R+ E+V F P+ E I +Q Sbjct: 675 IGSQWIAQQIQEGHQPKSNELIEV-MSKYFRPEFLGRLTEIVPFSPITESVAQEIFMLQF 733 Query: 780 KRLYKRLEE-RGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGEL 838 RL K+L + + ++ ++ E + L+E GY P YGARP+ I+ ++ +++ I+S + Sbjct: 734 SRLQKQLLDQKNIQVDLAPETISYLTEKGYSPQYGARPIAGVIRTYLKKTISKLIVSETI 793 Query: 839 VPGKVIRLEVNEDRI 853 G + + +E + Sbjct: 794 KQGDKVCVNYHEGNL 808 >UniRef50_C4RIQ4 ATPase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RIQ4_9ACTO Length = 832 Score = 528 bits (1360), Expect = e-148, Method: Composition-based stats. Identities = 305/532 (57%), Positives = 398/532 (74%), Gaps = 5/532 (0%) Query: 324 EKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIAD 383 EKD ALERRFQ V V EP++ DTI ILRGLKERYE+HH V+ITD A+VAAA LS RYI D Sbjct: 295 EKDPALERRFQPVLVGEPTIADTIGILRGLKERYEVHHGVRITDAALVAAAALSDRYITD 354 Query: 384 RQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDM 443 R LPDKAIDL+DE+AS +RM+IDS+P E+D ++R + +L++E+ AL KE D AS +RL+ Sbjct: 355 RFLPDKAIDLVDESASRLRMEIDSRPVEVDEIERAVRRLEIEEMALAKEPDAASAERLER 414 Query: 444 LNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQY 503 L +EL+DK Q + L E W+ EK+ ++ T K ELE+ E+A R G+L R +EL+Y Sbjct: 415 LRKELADKREQLTALSERWQTEKSHITKLSTAKEELERLGGEAERAERDGELERAAELRY 474 Query: 504 GKIPELEKQLEAATQLEGK---TMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLL 560 G+IP L+ L A + + +L+ +V +IA V+A WTGIP R++E E KLL Sbjct: 475 GRIPALKNDLAKAEEELARLQADGAMLKEEVGADDIATVVASWTGIPAGRLLEGETAKLL 534 Query: 561 RMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALAN 620 RME+ L RV+GQ EAV AVS+A+RR+RAG+ADP+RP GSFLFLGPTGVGKTEL KALA Sbjct: 535 RMEESLGARVVGQTEAVSAVSDAVRRARAGVADPDRPTGSFLFLGPTGVGKTELAKALAE 594 Query: 621 FMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVE 680 F+FD + AMVRIDMSE+ EKHSV+RLVGAPPGYVGYEEGG LTEAVRRRPYSVILLDEVE Sbjct: 595 FLFDDERAMVRIDMSEYGEKHSVARLVGAPPGYVGYEEGGQLTEAVRRRPYSVILLDEVE 654 Query: 681 KAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKEL 740 KAHPDVF++LLQVLDDGRLTDGQGRTVDFRN ++I+TSNLGS +I + + +E Sbjct: 655 KAHPDVFDVLLQVLDDGRLTDGQGRTVDFRNAILILTSNLGSSMISDLTLAEE--QRREG 712 Query: 741 VLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEAL 800 VL VV +F+PEF+NR+D++VVF L + +I IQL R+ RL +R + +S+ A Sbjct: 713 VLAVVRSHFKPEFLNRLDDIVVFAALLGDDLRAIVDIQLDRMRARLADRRLALDVSEAAR 772 Query: 801 KLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDR 852 L+E+GYDP+YGARP++R +Q I + LA+ +LSG + G +++++ + + Sbjct: 773 GWLAEHGYDPIYGARPVRRLVQSAIGDQLARALLSGAIRDGDTVQVDLADGK 824 >UniRef50_B6KUA3 ClpB protein, putative n=3 Tax=Toxoplasma gondii RepID=B6KUA3_TOXGO Length = 970 Score = 528 bits (1359), Expect = e-148, Method: Composition-based stats. Identities = 296/927 (31%), Positives = 455/927 (49%), Gaps = 142/927 (15%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLN-QEGGSVSPLLTSAGINAGQLRTDI 64 ++ + L A+ LA+ ++ I P+H ++ LL Q S+ L G N +L+ + Sbjct: 60 ISRDARDQLDQAEVLAMYMRHRQITPVHFLTVLLEVQGEFSIVRSLEQCGANVYELKKAM 119 Query: 65 NQALNRLPQVEGTG--GDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTL 122 + L +LP +++ + L RV ++AQK I E + + L Sbjct: 120 SNVLIKLPTSADVEIVDELESTPQLKRVALRALEIAQKDKKQTIGMEHLITSLF-EENNL 178 Query: 123 ADILKAAGATTANITQAIEQMRGGESVND--------------------QGAEDQRQALK 162 L+ AG + M + D + + ++ Sbjct: 179 RKSLEQAGCNVKVFLEHSTTMYENKFKQDVASRSMKKQPTEGSPATSRAKPDASDEEFVQ 238 Query: 163 KYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQR 222 + +D+T+ A +GKL+PV+GR++EI+ + VL R+ K NP L+GEPGVGKTA+VEGLAQR Sbjct: 239 SFGVDMTKLAAEGKLEPVVGRNKEIKEVLTVLSRKGKGNPCLVGEPGVGKTAVVEGLAQR 298 Query: 223 IINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHT 282 ++ G VP+ L+ + + A+D+GAL+AGA YRGEFE+R+K ++ QEG VILFIDELH Sbjct: 299 LVEGMVPKSLENKILFAVDLGALIAGATYRGEFEKRMKALIRYAVNQEGRVILFIDELHM 358 Query: 283 MVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPS 342 ++GAGK+DG MDA N+LKP +ARGE+ VGATT +EY + IEKDAA+ERR + +F+ EPS Sbjct: 359 LMGAGKSDGTMDAANLLKPPMARGEIRLVGATTQEEY-KIIEKDAAMERRLKPIFIEEPS 417 Query: 343 VEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIR 402 + I ILR L +++E HH ++I+D AIVAA LSH+YI +R+LPDKAIDL+DEAA++ R Sbjct: 418 TDRAIYILRKLSDKFESHHEMKISDEAIVAAVMLSHKYIRNRKLPDKAIDLLDEAAATKR 477 Query: 403 MQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEW 462 + K + D + + + +E+ + ++ + ++ + E Sbjct: 478 V----KWDLRSLNDDEVAMERKNSEQFEEETRKVEQQDQQRIEKQNHGDGTEEELKNLEK 533 Query: 463 KAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGK 522 + E+ SL Q + + + LA++++ + KI L L + + Sbjct: 534 EIEEQSLHEKQELVLTADDV-AQVISLWTGIPLAKLTDDEKSKILRLSDLLHSRVIGQDD 592 Query: 523 TMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSN 582 ++ + + + A G+PV + Sbjct: 593 AVKAVADAMVR---ARAGLSREGMPVGSFL------------------------------ 619 Query: 583 AIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHS 642 FLGPTGVGKTEL KALA MF S++ ++RIDMSEF E HS Sbjct: 620 --------------------FLGPTGVGKTELAKALAMEMFHSEKNLIRIDMSEFSEAHS 659 Query: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702 VSRL+G+PPGYVG++ GG LTEAVRRRP+SV+L DE+EK H + NI+LQ+LD+GRLTDG Sbjct: 660 VSRLIGSPPGYVGHDAGGQLTEAVRRRPHSVVLFDEIEKGHQQILNIMLQMLDEGRLTDG 719 Query: 703 QGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEF--------- 753 +G VDF N V+I+TSN+G+ I + + + L +F Sbjct: 720 KGLLVDFTNCVIILTSNVGAQYIISAYEQAEKESKTALATFDPKSGNLEQFAEAAKGAEA 779 Query: 754 ------------------INR---------------IDEVVVFHPLGEQHIASIAQIQLK 780 +++ + E+ L + + + + + Sbjct: 780 ASEGDDSSSEKKDKKGAVLDKNKKSGNWKKEARRKILSEIAGSGLLKPEVVNRFSGVIIF 839 Query: 781 RLYKRLEERGYEIHISDEALKLLSENG-----------------YDPVYGARPLKRAIQQ 823 + R S + L G Y +GARPLKR + Sbjct: 840 EPMNPADVRKILAIQSKDLKNALQRKGIELVIDASAEEFIVQRSYTHKFGARPLKRFVDN 899 Query: 824 QIENPLAQQILSGELVPGKVIRLEVNE 850 I +A ILSG L PG + + ++ Sbjct: 900 HIGAKMAPWILSGYLQPGMRVTVVASK 926 >UniRef50_C4V0P0 ATPase with chaperone activity, ATP-binding subunit n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V0P0_9FIRM Length = 833 Score = 527 bits (1357), Expect = e-148, Method: Composition-based stats. Identities = 286/875 (32%), Positives = 419/875 (47%), Gaps = 91/875 (10%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 T A+ +Q +A +I L+ +L+ + + L G++ I Sbjct: 7 FTQAAIKAVEFSQYIAQRRGKGYIGTGQLLLGILHMRDTTAAEALDKCGVDYDSAEQVIR 66 Query: 66 QALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES-RGTLAD 124 + + V ++ RV+ A++ +F+++E +L+ L GT Sbjct: 67 EG-DGFQDVLTPEETPYYTRRAQRVMQGAIDTAREE-RSFVTTEHILLSLLAEGEGTAIQ 124 Query: 125 ILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQ-----------ALKKYTIDLTERAE 173 L+ + + + +R+ +LKKY DLT A Sbjct: 125 TLEDLNVDIEALQNDVRAQMEDTEEAPKERSARRKTGKDSRKGLPASLKKYGTDLTAAAG 184 Query: 174 QGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLK 233 G+LDPVIGR EI R IQ+L RRTKNNP+L+GE GVGKTAI EGLA+RI GEVP L+ Sbjct: 185 GGELDPVIGRTAEIDRVIQILARRTKNNPLLLGEAGVGKTAIAEGLARRIAAGEVPFLLE 244 Query: 234 GRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAM 293 +R++ L M ALVAG KYRGEFEERLK V++D+ K + N+ILFIDE+HT++ AG A+GA+ Sbjct: 245 DKRIVTLSMTALVAGTKYRGEFEERLKNVVDDVVKAK-NIILFIDEIHTLIRAGGAEGAL 303 Query: 294 DAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGL 353 DA N+LKPALARG++ +GATTL EY++Y KD AL RRFQ V V EP D IL GL Sbjct: 304 DAANILKPALARGQMQIIGATTLSEYKKYFAKDGALARRFQTVTVDEPGEADAEQILLGL 363 Query: 354 KERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELD 413 + RYE HH +I D A+ AA LS RY+ DR LPDKAIDL+DEAAS +RM+ ++L Sbjct: 364 RGRYEEFHHARIEDGAVTAAVRLSRRYLTDRFLPDKAIDLMDEAASRVRMKSVGGTDKLV 423 Query: 414 RLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQ 473 L R I + ++ + D + +L +EL K E+ + + + Sbjct: 424 GLRREIAGVVKDKNTAISRQDYETAAKLRDREKELHAKLEASRRSEDTRTEIRVTENDIA 483 Query: 474 TIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTD 533 + A+ + A+ D E G+ + + A + R Sbjct: 484 DVVAQWTGIPVQRIAAK-ESDRLLALETHIGRRVIGQDEAVRAVARAVRRARAGVKDPRR 542 Query: 534 AEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLAD 593 + + TG+ + + L V G EA+ R +++ Sbjct: 543 PIGSFLFLGATGVGK-----------TELARALAEAVFGTEEAI---------IRFDMSE 582 Query: 594 PNRPIGSFLFLG-PTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPG 652 + +G P G E L + + +++ D E Sbjct: 583 YMEKHTTARLVGAPPGYVGYEEGGQLTDAVRRKPFSIILFDEVEKAHPD----------- 631 Query: 653 YVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNT 712 VF++LLQVL+DGRLTDGQGR DFRNT Sbjct: 632 ---------------------------------VFHMLLQVLEDGRLTDGQGRVTDFRNT 658 Query: 713 VVIMTSNLGSDLIQERFG----------ELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 762 ++IMTSN G+D ++ G D K+ VL V FRPEF+NR+D+++V Sbjct: 659 IIIMTSNAGADHLRSTRGTIGFAVGLQARADEEQAKKRVLEEVRKIFRPEFLNRVDDMIV 718 Query: 763 FHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQ 822 F+ LGE ++ I I L+ + RL E+ I +S A ++L G D +GARPL+RAIQ Sbjct: 719 FNALGEPELSKIVDILLRDVKVRLAEQKINIEVSPSAKRVLIAKGADVKFGARPLRRAIQ 778 Query: 823 QQIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857 + IE+ LA+ IL+ + G I + D + V+ Sbjct: 779 KNIEDALAEHILARDFASGDSISVRKLGDGLNFVK 813 >UniRef50_C7HWH6 Negative regulator of genetic competence MecB/clpC n=3 Tax=Clostridiales Family XI. Incertae Sedis RepID=C7HWH6_9FIRM Length = 803 Score = 526 bits (1355), Expect = e-147, Method: Composition-based stats. Identities = 274/858 (31%), Positives = 439/858 (51%), Gaps = 84/858 (9%) Query: 7 TNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQ 66 NK A+ + + +I HL+ AL+ + L AG N LR+ + Sbjct: 3 NNKLNRLTGQARRESYSLSHDYIGVEHLLLALMKTG-SLATKALEEAGANYELLRSIVIN 61 Query: 67 ALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADIL 126 + + V S + ++ + AQKR S E +LA L + +++ Sbjct: 62 NIGKGSAVRPAKE---YSNKVRQIFDRARLFAQKRKKVSASEEDILLAILNDDDSFTNLM 118 Query: 127 KAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEE 186 I + E + + + + LKK+ +L E AE GK+DPVIGR++E Sbjct: 119 FMLSGLDKKIIRDNLIRLQNEEKSSNTSNNLSENLKKFAKNLNEMAEAGKIDPVIGREDE 178 Query: 187 IRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALV 246 + R IQ+L RRTKNNP+LIG+PGVGKTAI+EGLAQRI++G+VP +K + +++LD+ +++ Sbjct: 179 VERVIQILLRRTKNNPILIGDPGVGKTAIIEGLAQRIVDGKVPFVMKEKTIVSLDLASMI 238 Query: 247 AGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARG 306 AG KYRG+FE+RLK + +L ++E +V+LFIDE H ++GAG ++G+MDA N+LKP LA+G Sbjct: 239 AGTKYRGDFEDRLKKLFGELEQRE-DVVLFIDEFHMVLGAGASEGSMDAANILKPILAKG 297 Query: 307 ELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQIT 366 ++ +GATT+DEYR+++EKD AL RR Q V V EP+ +DTI I+ GLK++YE HH V+IT Sbjct: 298 DIQIIGATTIDEYRKHVEKDQALTRRMQPVHVEEPNKDDTIKIIEGLKDKYEDHHKVEIT 357 Query: 367 DPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQ 426 AI AA LS RYI DR LPDKAID+IDEA S R++ + ++ + L E+ Sbjct: 358 GEAIKAAVDLSQRYIQDRFLPDKAIDVIDEACSKERIKNYKENKDQVSNKEILDGLIEEK 417 Query: 427 -QALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIA 485 QA+ +++ E + D +NE E++ E + + K ++ + +++ K+ Sbjct: 418 NQAINEQNFEKAASLRDQINEAREKLEKEKEEKKTDLKISFDEVAKIVSSWSKVPITKLT 477 Query: 486 IEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTG 545 ++ ++ DL + + + ++ A + ++ + + + TG Sbjct: 478 EDEKQKYMDLDIDLKKEVIGQDKAIDKISHAIKRARVGLKDPKKPIGSF----IFVGPTG 533 Query: 546 IPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLG 605 + + + +S A + + R +++ +G Sbjct: 534 VGKTYLAKS--------------------LAKNLFGDMDNLIRMDMSEYMEKFAVSRLVG 573 Query: 606 -PTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTE 664 P G E L + +++ D E Sbjct: 574 SPPGYVGYEEGGQLTEAVRKHPYSVILFDEIEKAH------------------------- 608 Query: 665 AVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDL 724 PD+FN+LLQ+LDDGRLTDGQGRTVDF+NT++IMTSN+G Sbjct: 609 -------------------PDIFNLLLQILDDGRLTDGQGRTVDFKNTIIIMTSNVGVSS 649 Query: 725 IQER---------FGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIA 775 + + + KE++ + + F PEF+NR+D++++F+ L + I I Sbjct: 650 LNQNPKIGFGTGDVEKEIDDSNKEIINKAIKNAFAPEFLNRLDDIIMFNSLDKNAIKEIT 709 Query: 776 QIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILS 835 +I L +RL+ G EI+ + + LLSE G+ YGARPL+R I +I+N LA++IL Sbjct: 710 KILLDETKERLKNLGIEINYNKRVVDLLSEGGFSKEYGARPLERHITNKIDNQLAEEILE 769 Query: 836 GELVPGKVIRLEVNEDRI 853 G+L I L V E +I Sbjct: 770 GKLSKDMKINLTVKEGKI 787 >UniRef50_B2S3E1 ATP-dependent Clp protease, subunit C n=4 Tax=Treponema RepID=B2S3E1_TREPS Length = 814 Score = 525 bits (1352), Expect = e-147, Method: Composition-based stats. Identities = 275/863 (31%), Positives = 411/863 (47%), Gaps = 76/863 (8%) Query: 2 RLDRLTNKFQLAL-ADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 L L+ + L Q++A ++P H++ AL+ + G L+ + + Sbjct: 1 MLQDLSANARKVLLELGQTVAREARASLLQPEHILLALIQHKVGRGYKLIEKLIEDVATV 60 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESR- 119 R + Q + + D+ S + +L++ A+ +I +E V+A Sbjct: 61 RLILEQHVLTNEGDVASPQDLPVSGRVKHLLDIAAMEARSLRCAYIGTEHLVIAFAREEQ 120 Query: 120 GTLADILKAAGATTANITQAIEQM-RGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLD 178 L L G + ++ A ++ + L +Y DLTERA G L+ Sbjct: 121 NPLFQSLIREGLSLDDLRNASIISSPHSDTTRTRLERKVASVLDEYGTDLTERARAGALN 180 Query: 179 PVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVL 238 PVIGR++EI R IQ+L RR KNNPVLIGEPGVGKT+IVEGLA I+ EVP L RV+ Sbjct: 181 PVIGRNKEITRVIQILCRRGKNNPVLIGEPGVGKTSIVEGLAYAIVREEVPHILLHTRVV 240 Query: 239 ALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNM 298 +LD+ A++AG KYRG+FEERLK ++ ++ + E VILFIDELHT++GAG G++DA NM Sbjct: 241 SLDLAAVIAGTKYRGQFEERLKRIIKEVEETE-KVILFIDELHTLIGAGGTQGSLDAANM 299 Query: 299 LKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYE 358 LKPALARG++ C+GATTL EYR+Y EKDAAL RRF+ V V EPS E+T ILR +K YE Sbjct: 300 LKPALARGQIQCIGATTLAEYRRYFEKDAALTRRFRSVLVREPSFEETCTILRKIKSHYE 359 Query: 359 LHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418 HH V A+ LS RYI +R PDKAIDL+DE + R+Q + + L + Sbjct: 360 RHHQVIYQSDALEKIVELSRRYIPERFFPDKAIDLMDEVGAMKRVQQRADTQVLRSFSIK 419 Query: 419 IIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAE 478 + L E + + D R L+ ++ R+ L+ EW A +A + + Sbjct: 420 VANLTTETERAIALED---WARARSLHTDVVQLRRRLHALKVEWSAREALSIFAEDVAQA 476 Query: 479 LEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAE 538 + + +L R + ++ + Q EA L R V Sbjct: 477 VSLMTDIPVHSLEGDELCRFTNIERDLCATVRGQREAIAT-------LARAIVRARVGIS 529 Query: 539 VLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPI 598 R G + + L + + L + G +A+ + + R + Sbjct: 530 SDTRPIGSFLFLGPTGVGKTL--LAKTLAEFLFGSADALIRIDMSDYMERYNTSR----- 582 Query: 599 GSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEE 658 L P G E L + +++ +D E Sbjct: 583 ---LMGAPPGYVGFENGGLLTERVRHRPFSVILLDEIEKAHP------------------ 621 Query: 659 GGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTS 718 DVFN+LLQVL++G L D G TV+FRNT++IMTS Sbjct: 622 --------------------------DVFNVLLQVLEEGELQDNLGHTVNFRNTIIIMTS 655 Query: 719 NLGSDLIQERFGEL--------DYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQH 770 N G+ + E +Y ++ L + F PEF+NR+DE VVF PL + Sbjct: 656 NAGTRGLGENVPGFQTARARNIEYRQLRVQALREIKRIFSPEFLNRVDECVVFAPLERET 715 Query: 771 IASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLA 830 + I + +LK+L +RL + + S A E+G+DP GARPL+R +QQ+IEN LA Sbjct: 716 LQEILECELKKLAERLRGKDIVLRYSAAAKAYCLEHGFDPFLGARPLRRVLQQEIENELA 775 Query: 831 QQILSGELVPGKVIRLEVNEDRI 853 +++ G L G + ++ + R+ Sbjct: 776 LRMIHGTLRAGSCVHIDSDGARL 798 >UniRef50_Q64SE5 ATP-dependent Clp protease ATP-binding subunit n=12 Tax=Bacteroidales RepID=Q64SE5_BACFR Length = 812 Score = 520 bits (1340), Expect = e-146, Method: Composition-based stats. Identities = 246/859 (28%), Positives = 424/859 (49%), Gaps = 50/859 (5%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M + AL A+ +AL + HL+ A+ + G + +L+S + G + Sbjct: 1 MNDSNYSPSLVSALKIARGMALQDKHNTFGVSHLVMAMFAENTG-LKEILSSMQKDVGYI 59 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG 120 + + +V+P +++ +VL+ ++ K G + I S A L Sbjct: 60 MEWFDTHREMYRSSGTSTEEVEPDEEVSKVLDESERSKIKLGADSIDSICVFTAILREGV 119 Query: 121 TLADI-LKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDP 179 + ++ + +I + + QG E Q A Y +L ++ Sbjct: 120 VYSHQQIEILDVSEDDILSHYNALTPLH--SYQGEEMQITASVPYADNLKKQETINAGGF 177 Query: 180 VIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLA 239 V+GR++E+R ++ L+R +++GE G+GK++I+ + I E E LK ++ Sbjct: 178 VVGREKEVRTILECLERSENKGILIVGESGIGKSSIINAFVKDICENE-DEMLKQISIVG 236 Query: 240 LDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNML 299 L+ L+A E +++ +++ L + E +L ID+L ++ + A N+L Sbjct: 237 LNTAKLLASTSSETEIAQKVVNLMHKLNQLE-QAVLVIDDLQVLLENSVSGKASTLINIL 295 Query: 300 KPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYEL 359 ++ G + V T D YR+ IEK +E R + + E + ++ K+R E Sbjct: 296 SAQISEGAANLVLTLTNDSYRKNIEKHP-IEGRLDIIKIEELDTATLESAIQLHKKRIEN 354 Query: 360 HHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRI 419 ++ ++I+D I + LS RY +R LP AIDL+D A+++R+ + + L+ Sbjct: 355 YYELRISDACIKDSIALSKRYFKERSLPSAAIDLLDRTAAAVRLCNKNARASVSDLEADF 414 Query: 420 IQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAEL 479 EE+ + + SE + + + Sbjct: 415 --------------------------EEIKSLDEKISE-----GPLYLLYRSVFSKISVV 443 Query: 480 EQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEV 539 K++ D + + I + K L + ++ +EI + Sbjct: 444 LTTKLSDNYVWDKEDDIAIKAGRLSGIIKELKALSDQSI----------EEIRSSEIEAI 493 Query: 540 LARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIG 599 +A T IP+ ++ E+++LL +E +L RV GQN A+ +S+AI SR+GL+DP +PIG Sbjct: 494 VAECTNIPIGKIQAREKDRLLSIESKLQERVKGQNRAITTLSDAIIESRSGLSDPKKPIG 553 Query: 600 SFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEG 659 SF FLGPTG GKTEL K+LA +FD + AM+R DMSEF E+HS + L GAPPGYVGYEEG Sbjct: 554 SFFFLGPTGTGKTELTKSLAELLFDDESAMIRFDMSEFKEEHSAALLYGAPPGYVGYEEG 613 Query: 660 GYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSN 719 G L +R++PYSV+L DE+EKAH V+++ LQ++D+G++ D GR DF N+++I TSN Sbjct: 614 GLLVTQIRQKPYSVVLFDEIEKAHSSVYDVFLQMMDEGKIHDKLGREGDFSNSIIIFTSN 673 Query: 720 LGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQL 779 +GS I E+ +L+ ++ FRPEF+ R+ EVV F P+ E I + Sbjct: 674 IGSQWIVEQIQSGHTPDSGKLIEV-MAQYFRPEFLGRLTEVVPFAPIDENVAKQIFNLHF 732 Query: 780 KRLYKRL-EERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGEL 838 RL ++L +++ ++++SDEAL+ L+ GY P YGARP+ I+ I+ +++ I+S ++ Sbjct: 733 GRLQEQLMKQKNIQLNLSDEALQHLANKGYSPKYGARPIAGVIRTYIKKSVSRLIVSEQI 792 Query: 839 VPGKVIRLEVNEDRIVAVQ 857 G I + ++ Q Sbjct: 793 KSGDNIVINYRNGELIWEQ 811 >UniRef50_C9MS36 ClpB protein n=1 Tax=Prevotella veroralis F0319 RepID=C9MS36_9BACT Length = 813 Score = 513 bits (1321), Expect = e-143, Method: Composition-based stats. Identities = 246/855 (28%), Positives = 423/855 (49%), Gaps = 49/855 (5%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M +N A+ A+++A + HL+ A+L ++ G + +L S + Sbjct: 1 MNTQNYSNSLIAAIKLAKAMAHQDKHLSFGVAHLVIAMLTEQTG-LREILNSMQKEVTYI 59 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG 120 VE G++ ++ VL+ ++ K G + + + A + Sbjct: 60 SDWFETYREMYVGVEHDAGEIIADHEVETVLDEAERSKIKLGTDSVDALCVFSAIVRDGV 119 Query: 121 TLADI-LKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDP 179 + +++ G T I + E S AE + +Y DL + Sbjct: 120 VYSHQQIESIGVTEDEIMEYFE---ASTSPLSPVAEMDMGSSIQYVSDLRRAELLEEGKS 176 Query: 180 VIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLA 239 +IGR +EIR ++ L+R + +L+G PGVGKT I+ LA + + E + ++ Sbjct: 177 IIGRSKEIRLILETLERSERQGILLVGAPGVGKTGIIRALAHEMEINQ-DEIINQTSLVG 235 Query: 240 LDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNML 299 L+ ++A + E ++L G+L + + + +L ID+L ++ +G A N L Sbjct: 236 LNTSKILAQSGNETEITQKLTGLLQKMNQAKSRGVLVIDDLQLLLESGNPTAATYILNNL 295 Query: 300 KPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYEL 359 + G + + ++D +R++IEK ++ R + V E + L + + Sbjct: 296 DAQICDGAVTLLMVLSMDAFRKHIEKH-SIANRLNIINVEELEPNILRSALLKHRTILQA 354 Query: 360 HHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRI 419 ++ + +T+ A ++A LS+RY ++ P +DLID A+S+R+ + +++L + Sbjct: 355 YYSLPMTEEAFISAYNLSNRYYKEKSQPASTLDLIDSTAASVRLSNKNAAGIVEQLVEQY 414 Query: 420 IQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAEL 479 + K L+ + S + + L+ + + +L Sbjct: 415 EKYKAM---------PVDDVSDFDLHLLYHTIFNKVSVVLTSKIEDDFVLTDDDSTQEKL 465 Query: 480 EQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEV 539 ++ L K L + L K + KV+ EI V Sbjct: 466 DK---------------------------LGKMLNELSVLSQKGI----EKVSSLEIESV 494 Query: 540 LARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIG 599 +A TGIP+ ++ E+++LL +E +LH RV GQ++A+ +S+AI SR+GL+DP +PIG Sbjct: 495 VADDTGIPIGKIQAQEKDRLLGIETKLHERVKGQDKAIRTLSDAIIESRSGLSDPKKPIG 554 Query: 600 SFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEG 659 SF FLGPTG GKTEL K+LA+ +FD D AM+R DMSEF E+HS + L GAPPGYVGYEEG Sbjct: 555 SFFFLGPTGTGKTELTKSLADLLFDDDTAMIRFDMSEFKEEHSAALLYGAPPGYVGYEEG 614 Query: 660 GYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSN 719 G L +R++PYSV+L DE+EKAH V++I LQ++D+G++ D GR DF N+++I TSN Sbjct: 615 GLLVTKIRQKPYSVVLFDEIEKAHSSVYDIFLQIMDEGKVHDKLGREGDFSNSIIIFTSN 674 Query: 720 LGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQL 779 +GS I E+ + EL+ +S FRPEF+ R+ EVV F P+ E I +Q Sbjct: 675 IGSQWIAEQIQKGHQPTSNELIEV-MSKYFRPEFLGRLTEVVPFSPITEAVAQQIFLLQF 733 Query: 780 KRLYKR-LEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGEL 838 RL K+ LE++ ++ ++ E + L+ G+ P YGARP+ ++ ++ +++ I+S + Sbjct: 734 SRLQKQLLEQKDIQLDLAPETIAYLTSKGFSPQYGARPIAGVVRTYLKKTISKLIVSEAI 793 Query: 839 VPGKVIRLEVNEDRI 853 PG I + + Sbjct: 794 KPGDHIIATYKDGNL 808 >UniRef50_C9LKK9 Negative regulator of genetic competence ClpC/MecB n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LKK9_9BACT Length = 866 Score = 513 bits (1321), Expect = e-143, Method: Composition-based stats. Identities = 264/903 (29%), Positives = 436/903 (48%), Gaps = 118/903 (13%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M + L+ L +++ A+ ++ L L LL+ ++ LL S G++ L Sbjct: 25 MTYE-LSAALTNILTYSKTEAIRFKQPIVDELCLFLGLLHNGNSRIADLLRSTGVSIEAL 83 Query: 61 RTDIN-QALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESR 119 R I Q + ++ ++ ++ R+L L A++ G + +LA L + Sbjct: 84 RDAIEHQFTVSVETLDAVSDNIILNETCRRILRLSVLEARRAGSKMADEDHLLLAILRDK 143 Query: 120 GTLA-DILKAAGATTANI--------------------------TQAIEQMRGGESVNDQ 152 IL T + I + + E+ Sbjct: 144 DNKCLPILHQNNITYSGIASLLNPTSEVSAGFGVADEAPEGFPDEKPQGDYKHSETKTRD 203 Query: 153 GAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGK 212 + + DLT+ A LDPVIGR+ EI+R Q+L RR KNNP+LIGEPGVGK Sbjct: 204 KQTSDTPVIDNFGTDLTKLAADEALDPVIGRENEIQRIAQILSRRKKNNPILIGEPGVGK 263 Query: 213 TAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGN 272 +A+VEGLA II+G+VP L+ RR+++LDM ++VAG +YRG+FE+RL+ ++ +L Sbjct: 264 SAVVEGLANLIISGKVPRILQHRRIVSLDMASIVAGTQYRGQFEDRLQRLIKELRAH-SE 322 Query: 273 VILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERR 332 +ILFIDE+HT++GAG A G++DA N+LKPALARGE+ C+GATT DEYR+ IEKD ALERR Sbjct: 323 IILFIDEIHTIIGAGSAPGSLDAANILKPALARGEIQCIGATTTDEYRKTIEKDGALERR 382 Query: 333 FQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAID 392 FQK+ +A + E T+ ILR LK+RYE HH+V TD A+ A L+ RYI+ R LPDKAID Sbjct: 383 FQKIQLAPTTPEQTLEILRNLKKRYEEHHNVAYTDDALHACVNLTTRYISGRALPDKAID 442 Query: 393 LIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKE 452 +DEA S + + PE +++L++ I L + EA+K + L L D+ Sbjct: 443 ALDEAGSRVHISGVKVPENIEKLEKCIAD-------LKRHKTEAAKAQNYELAANLRDEV 495 Query: 453 RQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVG-DLARMSELQYGKIPELEK 511 Q ++ E A K + + + + I+ + G + RM++ + ++ ++ Sbjct: 496 AQLTDKLEH--ANKDWIDSLKEDRPTVTAEDISTIVSMMSGIPVQRMAQDESIRLKGMKA 553 Query: 512 QLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVI 571 L+A + + + L +T +R+ ++ + + + Sbjct: 554 ALQAKVISQDEAISHLVRAITR---------------NRLGLKGTDRPIGTFLFVGPTGV 598 Query: 572 GQNEAVDAVSNAIR-----RSRAGLADPNRPIGSFLFLG-PTGVGKTELCKALANFMFDS 625 G+ V ++ + R +++ + +G P G + L + Sbjct: 599 GKTYLVKCLAEWMFGSKEDLIRIDMSEYGEKYSTSRLVGAPPGYVGYDEGGQLTEKVRRH 658 Query: 626 DEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPD 685 +++ +D E + L Sbjct: 659 PYSVILLDEIEKAHPDVFNTL--------------------------------------- 679 Query: 686 VFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE----------RFGELDYA 735 LQV+D+GRLTDG G TVDFRNT++IMTSN G+ +++ + D Sbjct: 680 -----LQVMDEGRLTDGNGTTVDFRNTIIIMTSNSGTRQLKDFGRGIGFKEAATDDADGK 734 Query: 736 HMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHI 795 +++++ + F PEF+NR+D+++ FHPL E IA +++ L +RLE+ + + Sbjct: 735 MVEQIIRKALQKQFSPEFLNRLDDIITFHPLTEADAGKIADLEIGALKERLEKMQLSLEL 794 Query: 796 SDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVP---GKVIRLEVNEDR 852 + A + + G++ YGAR LKR+IQ IE+ + I++ + IR +V +++ Sbjct: 795 TTAAKDYVVKKGFNVQYGARSLKRSIQANIEDAICDLIMNETQDKTEQPQTIRFDVVDEK 854 Query: 853 IVA 855 +VA Sbjct: 855 LVA 857 >UniRef50_A5K1F9 ATP-dependent Clp protease, putative n=1 Tax=Plasmodium vivax RepID=A5K1F9_PLAVI Length = 1222 Score = 499 bits (1285), Expect = e-139, Method: Composition-based stats. Identities = 219/783 (27%), Positives = 384/783 (49%), Gaps = 64/783 (8%) Query: 5 RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLN----QEGGSVSPLLTSAGINAGQL 60 + + + L +A A F+ ++ AL+N + L+ I+ L Sbjct: 299 KFSQNCKRVLHNAVLEARRKKKMFVSVTDILIALINMAQESQNCEFLRYLSELNISVNDL 358 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSE---------LF 111 + ++ TG + + LN + GD+ + Sbjct: 359 KRELTGYDEGNCPTPPTGTSHRSNAQRDGDLNANSAEKRGGGDSQSGTPEKRDDNQRMRS 418 Query: 112 VLAALESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTER 171 + L + ++ + + T+ + + + +K D+ + Sbjct: 419 LNNRLNNEPPNHHLMNNLNSDYLHQTREFKNYEESSFPPNGKLFNSAY-VKDCLTDMVQA 477 Query: 172 AEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEG 231 A + + GR +EI+R I++L RR K+NP+LIGE GVGKTAI+E L+ I+ +VP Sbjct: 478 AYEKGDEHFFGRKKEIKRIIEILGRRKKSNPLLIGESGVGKTAIIEHLSHLILKDKVPYH 537 Query: 232 LKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADG 291 L+ R+ L++G +VAG KYRGEFEE++K +L+++ K++ N ILFIDE+H +VGAG +G Sbjct: 538 LRNCRIYQLNVGNIVAGTKYRGEFEEKMKHLLSNMNKKKKN-ILFIDEIHVIVGAGSGEG 596 Query: 292 AMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILR 351 ++DA N+LKP L+ L C+G TT EY +YIE D AL RRF V V + ++T+ +L+ Sbjct: 597 SLDASNLLKPFLSSDNLQCIGTTTFQEYTKYIESDKALRRRFNCVPVKPFTGKETLLLLK 656 Query: 352 GLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEE 411 +K YE +H++ T+ A+ + L+ Y+ PDKAID++DEA + +++ + Sbjct: 657 KIKYSYEKYHNIYYTNEALKSIVMLTEDYLPTANFPDKAIDILDEAGAYQKIRYEVFMRR 716 Query: 412 LDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSG 471 R + + EW Sbjct: 717 RLRGE---------------------------------------NHERSEWGERVERGGQ 737 Query: 472 TQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKV 531 ++ + Q ++ + + ++ + V Sbjct: 738 AKSGQENGGQVNGGQANGGKLRSDQPSGDEHGSADQDGIANQDSGGDARSYLQNMHIKYV 797 Query: 532 TDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGL 591 T I ++++ I + + E EK+++++++L+ +IGQ + +D +S + ++ + Sbjct: 798 TSDVIENIVSKKASISYIKKNKKEEEKIIKLKEKLNKIIIGQEKVIDILSRYLFKAITNI 857 Query: 592 ADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPP 651 DPN+PIG+ L G +GVGKT + ++ ++F +++ ++ I+MSE+++KHSVS+L G+ P Sbjct: 858 KDPNKPIGTLLLCGSSGVGKTLCAQVISKYLF-NEDNLIVINMSEYIDKHSVSKLFGSYP 916 Query: 652 GYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRN 711 GYVGY+EGG LTE+V+++P+S+IL DE+EKAH +V ++LLQ+LD+G LTD +G V F+N Sbjct: 917 GYVGYKEGGELTESVKKKPFSIILFDEIEKAHGEVLHVLLQILDNGMLTDSKGNKVSFKN 976 Query: 712 TVVIMTSNLGSDLIQERFG---------ELDYAHMKELVLGVVSHNFRPEFINRIDEVVV 762 T + MT+N+GSD++ + F Y K G + PE +N + V Sbjct: 977 TFIFMTTNVGSDIVTDYFKLYNRNYSNMGFKYYLSKRPNRGEADGSLLPEGVNSVANSVE 1036 Query: 763 FHP 765 P Sbjct: 1037 EDP 1039 Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats. Identities = 35/135 (25%), Positives = 68/135 (50%), Gaps = 4/135 (2%) Query: 727 ERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRL 786 + Y ++ + + F PEF+NRIDE ++F ++ + +I Q + L KR+ Sbjct: 1077 KLRTNKWYEELQPEIEEELKKKFLPEFLNRIDEKIIFRQFLKRDVINIFQNMIDDLKKRI 1136 Query: 787 -EERGYEIHISDEALKLLS---ENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGK 842 + + + I + +K + N YD +GAR ++RA+ + IE+P+A ++S P Sbjct: 1137 KKRKNLNLIIEPDVIKYICSDENNIYDMNFGARSIRRALYRYIEDPIASFLISNLCEPND 1196 Query: 843 VIRLEVNEDRIVAVQ 857 I + ++ + VQ Sbjct: 1197 SIYVSLSSGNKIDVQ 1211 Score = 53.3 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 39/239 (16%), Positives = 80/239 (33%), Gaps = 25/239 (10%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 D K AL A+ +A H+ + I HL+ A++ + V +L I+ Sbjct: 61 FDEYDEKCIRALIMAREVAKNHNEKEILLKHLLIAIIRIDSNLVKHILNFCNISLTTFLD 120 Query: 63 DINQALNRLPQVEG---TGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESR 119 +N +N+ + S ++ ++ G Sbjct: 121 KLNNEMNKTGGETNFGTNRDEPNASPG---------EVPRQLGMPTDQ--------HHPP 163 Query: 120 GTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKL-D 178 ++++ + + M + + Q ED+ LK ++ + +G D Sbjct: 164 DNSREVVEGGAYPANDPNGENQLMSTFINKHIQDIEDKINQLKNLEEGQSDISTEGGDAD 223 Query: 179 PVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGL---AQRIINGEVPEGLKG 234 +G +E L R VL G PG + + L + ++ ++P L+G Sbjct: 224 SSVGGADERDEAASNLIR-DAAKRVLGGPPGESPSELPSELPSDVSKELSRQLPSDLQG 281 >UniRef50_B6KIW5 Heat shock protein, putative n=3 Tax=Toxoplasma gondii RepID=B6KIW5_TOXGO Length = 983 Score = 497 bits (1280), Expect = e-139, Method: Composition-based stats. Identities = 283/913 (30%), Positives = 443/913 (48%), Gaps = 140/913 (15%) Query: 5 RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQE-GGSVSPLLTSAGINAGQLRTD 63 T+ L + LA + + +HL++ LL+ +V L AG + LR D Sbjct: 99 NFTDAASDLLDCVEQLAWMLQHPELSRVHLVACLLDMPGDTTVPTALEKAGGKSADLRKD 158 Query: 64 INQALNRLPQVEG--TGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGT 121 ++ L R+PQ + G+ + +L RV+ AQ RG + V A Sbjct: 159 MHNLLIRMPQSVTPLSYGEARSRSELKRVIIDAYNEAQSRGHRLVGVHDLVTALARCDRF 218 Query: 122 LADILKAAGATTANITQAIE-----QMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGK 176 A L G + + + E ++ +K + +D+TE+A++GK Sbjct: 219 RAR-LANVGTDVSVFLKLVTSAFIVHTEAEERKATPARTGSQEWIKTFGVDMTEQAKEGK 277 Query: 177 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRR 236 + V GR+ EI + V+ R +K N +LIGEPGVGKTA+VEGLA+RI++G+VP+ L G + Sbjct: 278 IGTVTGREAEIEQITSVMSRMSKANCLLIGEPGVGKTAVVEGLAKRIVDGDVPDALLGVQ 337 Query: 237 VLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAG 296 V +LD+G+L++G+ RGEFE R+KG+L+ L + + ILFIDE+HT++GAGKADG MDA Sbjct: 338 VFSLDVGSLLSGSSMRGEFERRMKGILDYLFASDRSTILFIDEIHTLMGAGKADGPMDAA 397 Query: 297 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 356 N+LK AL R I + Sbjct: 398 NLLK--------------------------PALAR------------GALRVIGATTRAE 419 Query: 357 YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 416 Y H I + R++ I++ + + + + L+ Sbjct: 420 YRKH---------IERDMAFARRFVT--------IEMKEPDVAKTITMLKGIRKNLENHH 462 Query: 417 RRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIK 476 + I A ++L +L D ++ K+ + ++ + Sbjct: 463 KLTITDGALVAAATLSDRYIKSRQLPDKAIDLIDDACAIKKV----KSLRRLMNERAANE 518 Query: 477 AELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEI 536 + + + GD E + + +LE ++ + + +TDA++ Sbjct: 519 EKNDNGGSGDASSSANGD----GEKKRDDLEKLEAEIAKEAEDA--------DALTDADV 566 Query: 537 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNR 596 A+V++ TGIPV+++ E++R++LL + L +VIGQ EAV+AV+NAI RSRAGLA N Sbjct: 567 ADVVSLRTGIPVNKLTETDRQRLLSLPASLQAQVIGQEEAVEAVANAIIRSRAGLARRNA 626 Query: 597 PIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGY 656 PIG+FLFLG TGVGKTEL KAL +F ++ ++R+DMSE+ E H+V+RLVG+PPGYV + Sbjct: 627 PIGTFLFLGSTGVGKTELAKALTAAIFHDEKNLIRLDMSEYSEPHTVARLVGSPPGYVSH 686 Query: 657 EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 716 +EGG LTEAVR+RP+SV+L DE+E AHP+VF LLQ+LD+GRLTD +G TVDF N V+I Sbjct: 687 DEGGQLTEAVRQRPHSVVLFDEIENAHPNVFAYLLQLLDEGRLTDMRGITVDFTNCVIIA 746 Query: 717 TS----------------------------------------NLGSDLIQERFGELDYAH 736 TS N G+ + +E G+ + Sbjct: 747 TSNIGAKHILAASEKAGDEASGKVTIGHFDSERQQLEHIADANAGAQVAEEVNGDKKDST 806 Query: 737 MKELVLGVVSHN-------------------FRPEFINRIDEVVVFHPLGEQHIASIAQI 777 + F+P+ +NR+ V++F PL Q + I ++ Sbjct: 807 SPAQEKALARKKVANWKTQARAAVLAEAARVFKPQVLNRMT-VIIFDPLTPQDLKRIFRL 865 Query: 778 QLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGE 837 Q K L L E+ ++ + ++A+ + E Y +GAR LKR + I LA ILSG Sbjct: 866 QQKGLADLLSEQRIDLVVEEDAVTFVVERAYSRHFGARRLKRFFDKNITGRLAPWILSGW 925 Query: 838 LVPGKVIRLEVNE 850 L G ++R+ V++ Sbjct: 926 LRSGMMLRIIVSK 938 >UniRef50_A8YTL4 ATP-dependent protease n=26 Tax=Lactobacillus RepID=A8YTL4_LACH4 Length = 707 Score = 497 bits (1278), Expect = e-138, Method: Composition-based stats. Identities = 261/747 (34%), Positives = 396/747 (53%), Gaps = 82/747 (10%) Query: 110 LFVLAALESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLT 169 + L S D + +G + + Q+ K +DL Sbjct: 9 DTLFNELNSSFFNDDFGRRSGNGNSGSIPINYSSNMSSAPQTIQQNPQQPNEKPIGVDLV 68 Query: 170 ERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVP 229 E A++ DPVIGRDE+I I++L RR KNNPVLIG GVGKT+IVEGLA+RI +G VP Sbjct: 69 EEAKKNNFDPVIGRDEQIDNVIEILSRRKKNNPVLIGPAGVGKTSIVEGLAERIASGNVP 128 Query: 230 EGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKA 289 + ++++++ +VAG+ RG FEERLK V++ K + N++LFIDELH +VGAG Sbjct: 129 AKMANMHIISVNINDMVAGSSLRGSFEERLKKVIDKA-KSDPNIVLFIDELHNIVGAGST 187 Query: 290 DGAM---DAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDT 346 D DA N+LKPALA G+L +GATT E+++ IEKD AL Sbjct: 188 DSENNNGDAANILKPALANGDLKLIGATTTSEFQR-IEKDPAL----------------- 229 Query: 347 IAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQID 406 R Q+P+ D+ + ++ + + Sbjct: 230 -------------------------------SRRFQAVQVPEPTTDVAIKILKGLKKKYE 258 Query: 407 SKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEK 466 D + ++L ++ + L DK + KA Sbjct: 259 DYHHVKYSDDSLKLAVELSERYIQGRY--------------LPDKAIDLMDEAGAKKALL 304 Query: 467 ASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRL 526 + + +K ++ + +A + D + E++ KI ELEKQL+ Sbjct: 305 VQPTDEKNLKNQISALEAKKSEAAKAEDYDKAGEIK-TKIAELEKQLKNVDTKNI----- 358 Query: 527 LRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRR 586 +VT+ +I ++ + T IP+S + E +K L + ++L VI Q+ A+D +++AI R Sbjct: 359 --PEVTEKDIYAIIEQKTKIPMSELHADEAQKNLDLAKKLKKNVIDQDRAIDVITDAIAR 416 Query: 587 SRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRL 646 + D +RP GSFL GPTGVGKTEL K LA +F + + ++R+DMSE+ ++ +V++L Sbjct: 417 -KQIFKDSDRPTGSFLLTGPTGVGKTELAKQLAIQLFGNKDHLIRLDMSEYQDEMAVNKL 475 Query: 647 VGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRT 706 +G+ PGYVGY EGG LTE VR +PYS+IL DE+EKA+P VFN LLQ++DDGRLTD QGRT Sbjct: 476 IGSAPGYVGYGEGGQLTEKVRHQPYSLILFDEIEKANPQVFNALLQIMDDGRLTDAQGRT 535 Query: 707 VDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPL 766 V F++T++IMTSN G G++D ++ ++ + + FRPEF+NR+D +V F+ L Sbjct: 536 VSFKDTILIMTSNAGFSDKLLEDGKVD----QDKLISALENYFRPEFLNRLDAIVPFNSL 591 Query: 767 GEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIE 826 EQ + I I LK++ L ++G + +SDEA L+E GYD +GARPL+R ++Q +E Sbjct: 592 TEQDMGKIINIYLKKMSHVLAKKGVTVEVSDEAKNFLAEKGYDKKFGARPLRRVVEQNLE 651 Query: 827 NPLAQQILSGELVPGKVIRLEVNEDRI 853 P A+ IL K I ++ + Sbjct: 652 TPAAKLILREP--DTKKIEFTADDKHL 676 >UniRef50_C5NWU6 Negative regulator of genetic competence ClpC/MecB n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NWU6_9BACL Length = 871 Score = 485 bits (1249), Expect = e-135, Method: Composition-based stats. Identities = 245/777 (31%), Positives = 402/777 (51%), Gaps = 75/777 (9%) Query: 90 VLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAGATTANI------TQAIEQM 143 +LN + + + I + + + + L + K + + + ++ Sbjct: 155 ILNGISQERETNANQLIYKQYLLTGNIHTEEFLLGVFKNSKFLYKDFSDGKLEREKASKI 214 Query: 144 RGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPV 203 + ++ + + L D+T +A+ G+L VIGRDEEIR+ VL RR KNN + Sbjct: 215 KKESQISVKLSNPDYSLLNDIATDITLKAKNGELMDVIGRDEEIRKVEMVLTRRDKNNVI 274 Query: 204 LIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVL 263 L+G+ GVGK+AIV+G+A RI E+ LKG+++L + L A K G E + + Sbjct: 275 LLGDGGVGKSAIVDGIAMRIAKNEI-VSLKGKKILQFSLNDLKA--KIGGVTSEGIIKFI 331 Query: 264 NDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYI 323 ++ +++ +VILFIDE+H + G+ MDA KP +ARG+ +GATT E++ YI Sbjct: 332 EEMKREK-DVILFIDEIHML---GRVKHIMDA---FKPLMARGDFRIIGATTPMEWKLYI 384 Query: 324 EKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIAD 383 D AL RRF+KV V EPS+E+TI I++ + YE H V + I A L+ +Y+ Sbjct: 385 SSDTALVRRFEKVIVDEPSIEETINIVKNVSSVYENFHRVNFEENTIELAVRLAKKYLKG 444 Query: 384 RQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDM 443 +LPD A +ID A + R++ + + Sbjct: 445 EKLPDSAFTVIDNAGALARIEANQDIVMIRDYR--------------------------- 477 Query: 444 LNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQY 503 + +K +L++A+ V D+ + EL+ Sbjct: 478 --------------------------NEVNKLKKQLKEAESIEYNEAAVDDIRKRLELKV 511 Query: 504 GKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRME 563 + L T ++ V ++ + + E E +L ++ Sbjct: 512 RDFQKERNNLTFNNYEFKITKEDIKKAVEQKAGVKIREKDLKVG-KDADEEELSRLSNLK 570 Query: 564 QELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMF 623 L +VIGQ EA + ++ A+ RS+ G +P RPIG FLFLG +GVGKTE K L+ + Sbjct: 571 SILATKVIGQMEATNTIAEAVIRSKTGFRNPKRPIGVFLFLGTSGVGKTETAKVLSEELT 630 Query: 624 DSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAH 683 S + ++R+DMSE+ ++H V++L+GAPPGYVG+ GG LT AV+ P SV+LLDE+EKAH Sbjct: 631 GSVDDLIRLDMSEYQQEHEVAKLIGAPPGYVGFRSGGILTRAVKNNPKSVVLLDEIEKAH 690 Query: 684 PDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAH-----MK 738 P +++++LQV DDG LTDG G VDF NT++I+TSNLGS+LI+E + ++ Sbjct: 691 PRIYDLMLQVFDDGILTDGMGERVDFSNTIIILTSNLGSNLIREEKKVGFAKYGMEQIIQ 750 Query: 739 ELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE 798 E + +++ FRPE +NRIDE+V F E+ I I + L++ + ++E GYE+ + E Sbjct: 751 EKTMRAINNFFRPELLNRIDEIVTFKSFTEESIFKITSLLLEKEVEIVKESGYELKFTKE 810 Query: 799 ALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855 A++ L + YD GAR ++R I + IE PL++ I++ + G + ++ + +++ Sbjct: 811 AVRFLVKTTYDSEKGARAIRRGITKLIETPLSELIINNCINKGDKVVVDSDGFKLLF 867 >UniRef50_B3LAU4 ATP-dependent Clp protease, putative n=1 Tax=Plasmodium knowlesi strain H RepID=B3LAU4_PLAKH Length = 1243 Score = 484 bits (1246), Expect = e-135, Method: Composition-based stats. Identities = 225/788 (28%), Positives = 388/788 (49%), Gaps = 70/788 (8%) Query: 5 RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLN----QEGGSVSPLLTSAGINAGQL 60 + + + AL +A A F+ ++ AL+N E L+ I+ L Sbjct: 316 KFSENCKRALHNAVLEARRKKKMFVNVTDILIALINMAQENENCEFLKYLSELNISVNDL 375 Query: 61 RTDINQA---------LNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELF 111 + ++ R + D +Q R N A + D+ Sbjct: 376 KRELIGYDEENSFAPPTGRTSHSDQRDDDQSSNQADRREENGSLMEAIENRDDNQRMRNV 435 Query: 112 VLAALESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTER 171 + + + + N T+ + ++ +K D+ Sbjct: 436 -----NNEQSNHNFMNNLNNDYLNQTREFKNYEENSFPSNNKLFGSSY-VKDCLTDMVHA 489 Query: 172 AEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEG 231 A + + GR +EI+R I++L RR K+NP+LIGE GVGKTAIVE L+ I+ +VP Sbjct: 490 AYEKGDEHFFGRKKEIKRIIEILGRRKKSNPLLIGESGVGKTAIVEHLSYLILKDKVPYH 549 Query: 232 LKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADG 291 L+ R+ L++G +VAG KYRGEFEE++K +L+++ K++ N ILFIDE+H +VGAG +G Sbjct: 550 LRNCRIYQLNVGNIVAGTKYRGEFEEKMKHLLSNMNKKKKN-ILFIDEIHVIVGAGSGEG 608 Query: 292 AMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILR 351 ++DA N+LKP L+ L C+G TT EY +YIE D AL RRF V V S ++T+ +L+ Sbjct: 609 SLDASNLLKPFLSSDNLQCIGTTTFQEYTKYIEADKALRRRFNCVPVKPFSAKETLLLLK 668 Query: 352 GLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEE 411 +K YE +H++ T+ A+ + L+ Y+ PDKAID++DEA + +++ + Sbjct: 669 KIKYNYEKYHNIYYTNDALKSIVMLTEDYLPTANFPDKAIDILDEAGAYQKIKYEMFM-- 726 Query: 412 LDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSG 471 + L D+ + ++ E Sbjct: 727 ---------------------------------RQRLRDERGRRADAEPRNAESANGDLA 753 Query: 472 TQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKV 531 + + + D +L+ + + E + V Sbjct: 754 NGNLTNGEQMISHQVNATETSSDDHPPGKLRTDDNQPAFVHEDRNVEAENYLENMHMKYV 813 Query: 532 TDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGL 591 T I ++++ + I + + E EK+++++++L+ +IGQ + +D +S + ++ + Sbjct: 814 TSDVIENIVSKKSSISYIKKNKKEEEKIIKLKEKLNKIIIGQEKVIDILSRYLFKAITNI 873 Query: 592 ADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPP 651 DPN+PIG+ L G +GVGKT + ++ ++F +++ ++ I+MSE+++KHSVS+L G+ P Sbjct: 874 KDPNKPIGTLLLCGSSGVGKTLCAQVISKYLF-NEDNLIVINMSEYIDKHSVSKLFGSYP 932 Query: 652 GYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRN 711 GY+GY+EGG LTE+V+++P+S+IL DE+EKAH +V ++LLQ+LD+G LTD +G V F+N Sbjct: 933 GYIGYKEGGELTESVKKKPFSIILFDEIEKAHSEVLHVLLQILDNGMLTDSKGNKVSFKN 992 Query: 712 TVVIMTSNLGSDLIQERFG--------------ELDYAHMKELVLGVVSHNFRPEFINRI 757 T + MT+N+GSD+I + F + +E + P+ +N + Sbjct: 993 TFIFMTTNVGSDIITDYFKLYNKNYANLGFKYYLNKKKNKEETDGSSLHKGQLPQGVNSV 1052 Query: 758 DEVVVFHP 765 VV HP Sbjct: 1053 GNSVVEHP 1060 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 35/135 (25%), Positives = 69/135 (51%), Gaps = 4/135 (2%) Query: 727 ERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRL 786 + Y ++ + + F PEF+NRIDE ++F ++ + +I Q ++ L KR+ Sbjct: 1098 KLRTNEWYEELQPEIEEELKKKFLPEFLNRIDEKIIFRQFLKRDVVNIFQNMIEDLKKRI 1157 Query: 787 E-ERGYEIHISDEALKLLS---ENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGK 842 + + + I + +K + N YD +GAR ++RA+ + IE+P+A ++S P Sbjct: 1158 KKRKNLNLIIEQDVIKYICSDENNIYDMNFGARSIRRALYKYIEDPIASFLISNLCEPND 1217 Query: 843 VIRLEVNEDRIVAVQ 857 I + ++ + VQ Sbjct: 1218 SIHVSLSNGNKINVQ 1232 Score = 49.8 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 30/68 (44%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 D K AL A+ +A ++ + I HL+ A++ + V +L I+ Sbjct: 61 FDEYDEKCIRALIMAREVAKNNNEKEILLKHLLIAIIRIDSNLVKHILNFFNISLTTFLE 120 Query: 63 DINQALNR 70 +N+ +N+ Sbjct: 121 KLNKEINK 128 >UniRef50_Q9S5Z2 ATP-dependent Clp protease ATP-binding subunit clpE n=161 Tax=Bacilli RepID=CLPE_LACLM Length = 748 Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats. Identities = 264/771 (34%), Positives = 402/771 (52%), Gaps = 84/771 (10%) Query: 88 VRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAGATTANITQAIEQMRGGE 147 L + D + + +AL+ + GA + RG Sbjct: 41 QEALFGAGNASNGNSDEPFNPFNDIFSALQGQDF-------NGAASNQTPPTQTGGRGPR 93 Query: 148 SVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGE 207 + A+ + L+++ I++TE A +G++DPVIGRDEEI+R I++L RRTKNNPVLIGE Sbjct: 94 GPQNPRAKQPKGMLEEFGINITESARRGEIDPVIGRDEEIKRVIEILNRRTKNNPVLIGE 153 Query: 208 PGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLA 267 PGVGKTA+VEGLAQ+I++G+VP+ L+ + V+ LD+ +LV G RG+FEER++ +++++ Sbjct: 154 PGVGKTAVVEGLAQKIVDGDVPQKLQNKEVIRLDVVSLVQGTGIRGQFEERMQKLMDEIR 213 Query: 268 KQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDA 327 K+ +VI+FI DE + + + Sbjct: 214 KRN-DVIMFI---------------------------------------DEIHEIVGAGS 233 Query: 328 ALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLP 387 A + D IL+ R EL +V A TL+ I ++ Sbjct: 234 AGDGNM-----------DAGNILKPALARGEL---------QLVGATTLNEYRIIEK--- 270 Query: 388 DKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEE 447 D A++ + +D L + R + A + + Sbjct: 271 DAALERRMQPVKVDEPSVDETITILRGIQARYEDYHHVKYTDEAIEAAAHLSNRYIQDRF 330 Query: 448 LSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS--ELQYGK 505 L DK + K + I + A+ +A + D + + Q K Sbjct: 331 LPDKAIDLLDESGSKKNLTLKFVDPEDINRRIADAESKKNEATKAEDFEKAAHFRDQISK 390 Query: 506 IPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQE 565 + EL+KQ + +T+ +I +++ + T IPV + E E+ +L+ + + Sbjct: 391 LRELQKQEVTDEDM---------PVITEKDIEQIVEQKTQIPVGDLKEKEQTQLINLADD 441 Query: 566 LHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDS 625 L VIGQ+EAVD +S AIRRSR GL PNRPIGSFLF+GPTGVGKTEL K LA +F S Sbjct: 442 LKAHVIGQDEAVDKISKAIRRSRVGLGKPNRPIGSFLFVGPTGVGKTELAKQLAKELFGS 501 Query: 626 DEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPD 685 E+M+R DMSE+MEKHSV++L+GAPPGYVGYEE G LTE VRR PYS+ILLDE+EKAHPD Sbjct: 502 SESMIRFDMSEYMEKHSVAKLIGAPPGYVGYEEAGQLTERVRRNPYSLILLDEIEKAHPD 561 Query: 686 VFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAH-MKELVLGV 744 V ++ LQ+L+DGRLTD QGRTV F+++++IMTSN G+ ++ G + VLG Sbjct: 562 VMHMFLQILEDGRLTDAQGRTVSFKDSLIIMTSNAGTGKVEASVGFGAAREGRTKSVLGQ 621 Query: 745 VSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLS 804 + F PEF+NR D ++ F L ++++ I + L + +++ + ++ A + L Sbjct: 622 LGDFFSPEFMNRFDGIIEFSALSKENLLKIVDLMLDEVNEQIGRNDIHLSVTQAAKEKLV 681 Query: 805 ENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855 + GY+P GARPL+R IQ+ IE+ +A + K + ++ +D+IV Sbjct: 682 DLGYNPAMGARPLRRIIQENIEDSIADFYIEHP--EYKQLVADLIDDKIVI 730 >UniRef50_C4W7H5 ATPase AAA-2 domain protein n=1 Tax=Staphylococcus warneri L37603 RepID=C4W7H5_STAWA Length = 882 Score = 478 bits (1229), Expect = e-133, Method: Composition-based stats. Identities = 247/930 (26%), Positives = 417/930 (44%), Gaps = 144/930 (15%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 LT + + A SL + + IE ++ AL + L + I + +L+ +I Sbjct: 15 LTKQCKQAFEKVISLVEVKERKVIESQDVLLALTITADTGATYSLGRSSITSKKLKDEIQ 74 Query: 66 --QALNRLPQVEGTGGDV-----------------------------------------Q 82 +++ DV Sbjct: 75 FADIVDKRQMDSNDNDDVDEFGLKTHRKKRLLNEKIINSPVQFIDEVSSDQFIKYMNDYP 134 Query: 83 PSQDLVRVLNLCDKLA-QKRGDNFISSELFVLAALESRGTLAD----------------- 124 S ++ + +++ Q I + ++ ++ A Sbjct: 135 ISNNVKESIEFAEEMRFQNNPSGGIDTYWILMGMVQDEKCNAYHILMKLMLKFDFVYDGD 194 Query: 125 ----------ILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQ 174 L + N + + + + ++ L+ +I++T++A Sbjct: 195 KLTDRFQNRGYLANSFYDGKNEKEQQLDLAKQKRITNKLYNPNYSLLEDISINITDKARN 254 Query: 175 GKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKG 234 ++ PVI R++EI L RR KNN LIG+ GVGK+AIVEGLA +I+N E+P L Sbjct: 255 EEILPVINREKEIHHLEIALSRRDKNNVALIGKGGVGKSAIVEGLALKIVNKEIP-SLIN 313 Query: 235 RRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMD 294 +++L M L++ +G+ ++ ++++ K E +VILF+DE+H + GK G Sbjct: 314 KKILQFSMNDLIS--VIQGDTFRGIQRFMSEM-KSEKDVILFVDEIHML---GKYKG--- 364 Query: 295 AGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLK 354 ++LKPA+AR + +GATT E++ YI D AL RRF+ V + EP+VEDTI I+ Sbjct: 365 ITDILKPAMARNDFRIIGATTPSEWQNYISSDIALTRRFEIVNINEPTVEDTIEIINEAI 424 Query: 355 ERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDR 414 YE H V + I A L +Y QLPD A ++D A + R++ Sbjct: 425 SVYENFHQVNFEEETIELAVKLGKKYFQKEQLPDLAFTILDNAGAICRIERGQ------- 477 Query: 415 LDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQT 474 + DK ++ ++ + + Sbjct: 478 --------------------------FTNIQLNYEDKMNDLKLTLKQAQSIEFNDQQIDE 511 Query: 475 IKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDA 534 I+ E++Q E AR + +M ++K +E + ++ Sbjct: 512 IRKEIKQL--EKEYARNITSSKKMVFPINVTKEHIKKAIEQKLGESIDGLEFQGDE---- 565 Query: 535 EIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADP 594 + + E +L ++ + ++IGQ++A++ ++NA+ R + G Sbjct: 566 ---------------QFSDIELNRLRSLKAVMKSQIIGQDDAINTIANAVIRKKLGFKQH 610 Query: 595 NRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYV 654 N P+G F+ LG TGVGKTE K L ++ + ++R DMSE+ + H VS+L+G PPGYV Sbjct: 611 NHPVGVFMLLGTTGVGKTETAKILNRTLYKDESNIIRFDMSEYQKDHEVSKLIGPPPGYV 670 Query: 655 GYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVV 714 GY G L + V P +VIL DEVEKAHP +F+ILLQV DD RLT+ G +F ++ Sbjct: 671 GYGRDGDLVKTVLEHPNAVILFDEVEKAHPKIFDILLQVFDDARLTNSLGEVANFSECII 730 Query: 715 IMTSNLGSDLI---------QERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHP 765 ++TSN+G+ I Q+ E D+ + E + +++ FRPEF+NRIDE + F P Sbjct: 731 LLTSNIGTSDIRHKKVIGLNQQNNDETDFVTVDESIKNALNNYFRPEFLNRIDEFITFKP 790 Query: 766 LGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQI 825 L +Q I I + L++ +E GY I S A++L+++ Y+P GARP+KR I + + Sbjct: 791 LDQQEIFEITNLLLEKEKTLVESLGYNIEFSSSAMRLIAKLCYEPKNGARPIKRGISKLL 850 Query: 826 ENPLAQQILSGELVPGKVIRLEVNEDRIVA 855 E+ L+ +I++G L G I + +V Sbjct: 851 EDRLSDEIINGTLQKGDNIEVTEANGELVI 880 >UniRef50_C5WHX6 ATP-dependent endopeptidase clp ATP-binding subunit n=67 Tax=Bacilli RepID=C5WHX6_STRDG Length = 763 Score = 476 bits (1225), Expect = e-132, Method: Composition-based stats. Identities = 248/708 (35%), Positives = 376/708 (53%), Gaps = 75/708 (10%) Query: 147 ESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIG 206 + + + L+++ I++T+ A G +DPVIGRD+EI R I++L RRTKNNPVLIG Sbjct: 106 PTQPQTPNQQAKGLLEEFGINVTDIARHGDIDPVIGRDDEITRVIEILNRRTKNNPVLIG 165 Query: 207 EPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDL 266 EPGVGKTA+VEGLAQ+I++G VP L+G++V+ LD+ +LV G RG+FEER++ ++ ++ Sbjct: 166 EPGVGKTAVVEGLAQKIVDGTVPHKLQGKQVIRLDVVSLVQGTGIRGQFEERMQKLMEEI 225 Query: 267 AKQEGNVILFIDELHTMVGAGKA-DGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEK 325 +++ +VILFIDE+H +VGAG A DG MDAGN+LKPALARGEL VGATTL+EYR IEK Sbjct: 226 RQRK-DVILFIDEIHEIVGAGSAGDGNMDAGNILKPALARGELQLVGATTLNEYR-IIEK 283 Query: 326 DAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQ 385 DAALERR Q V V EPSVE+TI IL+G++ +YE +HHV+ + AI AAA LS+RYI DR Sbjct: 284 DAALERRMQPVKVDEPSVEETITILKGIQPKYEDYHHVKYSPAAIEAAAHLSNRYIQDRF 343 Query: 386 LPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLN 445 LPDKAIDL+DEA S + + ++ + +++++ + E+ +A R + Sbjct: 344 LPDKAIDLLDEAGSKMNLTLN-----------FVDPKEIDKRLIEAENLKAQATRDEDYE 392 Query: 446 EELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGK 505 + + ++K +A Q I E+ AI + + + + E + + Sbjct: 393 RAAY-----FRDQIAKYKEMQAQKVDEQDIPIITEKTIEAIIEQKTNIPVGDLKEKEQSQ 447 Query: 506 IPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQE 565 + L L+A + + + + + G P + L Sbjct: 448 LVNLANDLKAHVIGQDDAVDKIAKAIRRNRVG------LGTPNRPIGSF----LFVGPTG 497 Query: 566 LHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLG-PTGVGKTELCKALANFMFD 624 + + + A++ +A R +++ +G P G E L + Sbjct: 498 VGKTELSKQLAIELFGSADNMIRFDMSEYMEKHAVAKLVGAPPGYVGYEEAGQLTEQVRR 557 Query: 625 SDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHP 684 + +++ +D EVEKAHP Sbjct: 558 NPYSLILLD--------------------------------------------EVEKAHP 573 Query: 685 DVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAH-MKELVLG 743 DV ++ LQVLDDGRLTDGQGRTV F++T++IMTSN G+ + G VLG Sbjct: 574 DVMHMFLQVLDDGRLTDGQGRTVSFKDTIIIMTSNAGTGKSEASVGFGAAREGRTSSVLG 633 Query: 744 VVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLL 803 +S+ F PEF+NR D ++ F L + ++ I + L+ + KRL G + ++ + + L Sbjct: 634 ELSNFFSPEFMNRFDGIIEFKALSKDNLLHIVDLMLEDVNKRLSYNGIHLDVTQKVKEKL 693 Query: 804 SENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNED 851 + GYDP GARPL+R IQ IE+ + L + N + Sbjct: 694 VDLGYDPKMGARPLRRTIQDYIEDAITDYYLEHPTEKDLRAIMTSNSN 741 >UniRef50_Q4U8P5 Endopeptidase (CLP homologue) ATP-binding chain, putative n=2 Tax=Theileria RepID=Q4U8P5_THEAN Length = 916 Score = 475 bits (1221), Expect = e-132, Method: Composition-based stats. Identities = 237/909 (26%), Positives = 388/909 (42%), Gaps = 141/909 (15%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 + D ++ L + A + +E H+ L+ G +L G+ Sbjct: 69 LNFDNFSDNAIKVLMLSLEEAKLSNQPSVESAHIFQGLVCLNQGLAFKILKEFGVTVNSA 128 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESR- 119 R + + + + S L+ A++ G++ I +E +L L Sbjct: 129 RNAAKSS-YPVDESKKVKNLPTFSNSAKNALDYSSTEAERLGNSTIETEHLLLGVLNDTT 187 Query: 120 ------------------GTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQAL 161 T ++ + + + + R L Sbjct: 188 KEMSTFYKNLDLDVTLAIDTTVRTIEKIKEIKESNSLSENIQESSPNFVYLSPTMNRDEL 247 Query: 162 KK-----YTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIV 216 + +T+DLTE+A G+L VI RD EI R I L R TK+NP+L+GEPGVGKTAIV Sbjct: 248 AQSCISLFTVDLTEKARNGQLPKVIHRDNEIERAIITLSRMTKSNPLLVGEPGVGKTAIV 307 Query: 217 EGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILF 276 EG+A +I G + +R+L L G L+AG K+RG+FEERL +++++ K G++IL Sbjct: 308 EGIANKISQGISQPQISKKRILQLQFGLLIAGTKFRGQFEERLTKLIDEI-KSSGDIILV 366 Query: 277 IDELHTMVG-----------AGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEK 325 IDE H ++G AG DG++DA N+LKP L+RGE+ C+ TT EY++Y EK Sbjct: 367 IDEAHMLIGMKFIYNNNKLGAGAGDGSIDAANLLKPPLSRGEIQCIAITTPKEYKKYFEK 426 Query: 326 DAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQ 385 D AL RRF ++V EPS EDT+ IL G+ Y H V+ T +I A S +YI DR Sbjct: 427 DMALSRRFHPIYVDEPSEEDTLKILNGISSSYGEFHGVEYTQESIKLALKYSKQYINDRF 486 Query: 386 LPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLN 445 LPDKAID++DE+ S ++Q ++ + ++++ S + Sbjct: 487 LPDKAIDIMDESGSFAKIQYQNELK-------------------REKNELTSATETEGNG 527 Query: 446 EELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGK 505 E S+ E + ++ E+ + + + + L +++ + Sbjct: 528 ETESNPENEVEQVVEKKEQNVLGQVKPEHV--------AEVMSIWTGIPLKKLTRGEMEI 579 Query: 506 IPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQE 565 I +E+ L + + ++ + + A T I + + Sbjct: 580 IRNMEEDLHKMVIGQEEAVKNVCKAIRRA--------KTNIK-------NPNRPIGSFLF 624 Query: 566 LHHRVIGQNEAVDAVSNAI----RRSRAGLADPNRPIGSFLFLG-PTGVGKTELCKALAN 620 +G++E A++ + R +++ P LG P G + L Sbjct: 625 CGPPGVGKSEVARALTKYLFAKENLIRIDMSEYTEPHSISRILGSPPGYKGHDTGGQLTE 684 Query: 621 FMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVE 680 + + ++V D E Sbjct: 685 KVKSNPYSVVMFDEIEKAH----------------------------------------- 703 Query: 681 KAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGE--------- 731 DV NILLQ+L+DG+LTD + +T+ F+NT++IMTSN GS++IQ Sbjct: 704 ---HDVLNILLQILEDGKLTDSKNQTISFKNTIIIMTSNTGSNVIQRSSKGVHTFGFTVD 760 Query: 732 ----LDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLE 787 DY +K LV+ + +F PE INRID+V++F PL E + IA++ L L R Sbjct: 761 SDESSDYLKIKALVMEELKSHFLPELINRIDDVILFKPLSESELKEIAKLMLNDLTARAN 820 Query: 788 ERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLE 847 G I IS++ + + D GARPL+R I +E+ LA ++S + + Sbjct: 821 SAGILIEISEKFADYILKLPRDDKSGARPLRRLITSVLEDKLADLVISDDFDSNNTYTVT 880 Query: 848 VNEDRIVAV 856 V+E V + Sbjct: 881 VDEADSVVI 889 >UniRef50_UPI0001C37703 ATPase AAA-2 domain protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37703 Length = 792 Score = 470 bits (1210), Expect = e-131, Method: Composition-based stats. Identities = 248/818 (30%), Positives = 406/818 (49%), Gaps = 87/818 (10%) Query: 46 VSPLLTSAGINAGQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNF 105 V+ + GI +L +Q + L +G ++ S + L + GD+ Sbjct: 42 VAEYMNKLGITDEELDQLSDQMMGML---DGDSFEMGGSGLMPDFLTNMFGGGEN-GDSS 97 Query: 106 ISSELFVLAALESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYT 165 +S+ + G + + + + S + + + + + L Y Sbjct: 98 DNSDDNGGHKSFFDALGSAFGGLKGGSESGNSSPSGKSDKKGSSSRREKKKELKFLGSYC 157 Query: 166 IDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIIN 225 +L+++A G+LD +IGRD+EI R IQ+L RRTKNNP LIGEPGVGKTAI EG+AQRI + Sbjct: 158 TNLSQKAADGQLDNIIGRDKEIARVIQILSRRTKNNPCLIGEPGVGKTAIAEGIAQRINS 217 Query: 226 GEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVG 285 G+VP L +++ LD+ ALVAG ++RG+FE R+KG+++++ K+EGN+ILFIDE+H +VG Sbjct: 218 GDVPFNLADKKLYLLDLTALVAGTQFRGQFESRVKGLVDEV-KREGNIILFIDEVHNLVG 276 Query: 286 AGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVED 345 AG ++G+M+A N+LKPAL+RGE+ +GATT EYR+YIEKD+ALERRFQ V V EP++ED Sbjct: 277 AGDSEGSMNAANILKPALSRGEVQVIGATTFGEYRKYIEKDSALERRFQPVTVNEPNIED 336 Query: 346 TIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQI 405 T+++L G+K+ YE +HH+ I+D + A LS RYI DR LPDKAIDL+DEA + ++ Sbjct: 337 TVSVLLGIKKYYEEYHHLHISDYLVRVCAVLSERYITDRFLPDKAIDLMDEACAYTCIRS 396 Query: 406 DSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAE 465 + E+ E +K + +E + + + Sbjct: 397 -------------PEIAEYEKIKKEISVLEGMEKSISEQDEIDYQALAEVKGKLIHARED 443 Query: 466 KASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMR 525 +A L E + + ++++E ++ KI +LE L++ + + + Sbjct: 444 EAKLRDKAESVEVTEGDIAKVVELWTGIPASKIAENEFLKIAKLEGALKSRVLGQDEAVE 503 Query: 526 LLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIR 585 +L + + + + + + +G+ E V A++ + Sbjct: 504 VLTKAIKRTRV----------------QLSKRRRPASFIFVGPTGVGKTELVKALAEEMF 547 Query: 586 -----RSRAGLADPNRPIGSFLFLG-PTGVGKTELCKALANFMFDSDEAMVRIDMSEFME 639 R + + +G P G + L + +++ D E Sbjct: 548 DSPEPLIRLDMTEYMEKHSVARMIGSPPGYVGYDEAGQLTEKVRRRPYSVILFDEIE--- 604 Query: 640 KHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRL 699 KAHPDV NIL+Q+LD+G++ Sbjct: 605 -----------------------------------------KAHPDVMNILMQILDEGKV 623 Query: 700 TDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAH--MKELVLGVVSHNFRPEFINRI 757 D GRTV+F NT++ MTSN GS G A K+ + + RPEFI+RI Sbjct: 624 DDAHGRTVNFENTIICMTSNAGSTDKSVGVGFNRTADEVSKDKAMKGLREFLRPEFISRI 683 Query: 758 DEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPL 817 DE+VVF L +++ A IA + L + + L E+ + + EALKL++E + YGAR + Sbjct: 684 DEIVVFRQLTKENFADIAALMLDEMKEPLAEKNIGLTYTPEALKLIAEKSFGKPYGARDI 743 Query: 818 KRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855 +R I+Q++E+ +A+ I+ + I + N +++V Sbjct: 744 RRVIRQEVEDKVAEIIIEN-ASDTETIAVSANGEQLVV 780 >UniRef50_A8I996 ClpB chaperone, Hsp100 family (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8I996_CHLRE Length = 787 Score = 466 bits (1199), Expect = e-129, Method: Composition-based stats. Identities = 257/690 (37%), Positives = 363/690 (52%), Gaps = 41/690 (5%) Query: 144 RGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPV 203 RG + G AL+++ DLTE A +G LDPVIGR + I RT+Q+L RRTKNNPV Sbjct: 75 RGSTATGAAGRRVPGAALQRFGRDLTEEARRGLLDPVIGRQDVIARTLQILLRRTKNNPV 134 Query: 204 LIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVL 263 L+GEPGVGKTA+VEG+AQ I + P GL G+RV+ALD+ A++AG+ YRGEFEERL+ V+ Sbjct: 135 LVGEPGVGKTALVEGIAQLIASAAAPPGLAGKRVVALDVTAVLAGSSYRGEFEERLQAVV 194 Query: 264 NDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYI 323 D+A GNVILF+DE+H +VGAG A+G +DA N+LKPALARG L C+GATTLDEYR+++ Sbjct: 195 ADVAAARGNVILFVDEMHMLVGAGGAEGGLDAANILKPALARGTLRCIGATTLDEYRKHV 254 Query: 324 EKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIAD 383 E D A RRFQ V V EP + + L+GL RYE HH V T A+ AAA + RY+ + Sbjct: 255 ESDPAFARRFQSVLVEEPGEAEVVGWLQGLAPRYEQHHGVLFTRAALRAAAGCAKRYVTE 314 Query: 384 RQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDE-------- 435 R+LPD AIDL+DEAA+ + + + RL + + S+ Sbjct: 315 RRLPDSAIDLMDEAAAHVAARRCATGAVGCRLRGGRAGRRRGSSSCWSGSEPHRSDPRAA 374 Query: 436 -ASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGD 494 S + Q++ A+ + + + ++ Sbjct: 375 WRSNGGAAASAGAAAKGGHQHAGAAAAAAADTGAPAAIVAAGPTHVAHDLTLDDIHEDFT 434 Query: 495 LARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMES 554 + + + + A T+ V + + EV AR G+P++ ++ Sbjct: 435 DDDVDGDEDDADINDDDLIATAAVGASGTVDPKALVVDELAVLEVAARAAGLPLAAVLRD 494 Query: 555 ER-EKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGL---------------------- 591 +R + + L V+GQ EAV AV A++ R GL Sbjct: 495 QRGAPVSHLRAALEAAVVGQREAVRAVCTAVQLHRLGLAATAAAAAGAGAAAAGGEGWQK 554 Query: 592 --ADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGA 649 RP+ SFL GP GVGK+ LCKALA +F A++ + E + +VSRLVGA Sbjct: 555 WRGQQQRPVASFLLEGPPGVGKSTLCKALATELFHDPAALLVLHGGELASRTAVSRLVGA 614 Query: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709 PGYVG+ GG LTEA+RRRP V+L+ V++AH +V +LL+ + DG + DGQGR Sbjct: 615 APGYVGFGTGGLLTEALRRRPAGVLLVQGVDRAHFEVQELLLRGVQDGVIRDGQGRATSL 674 Query: 710 RNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQ 769 RNT+V++T++ + G VLG PE +D VV F PL Sbjct: 675 RNTIVVLTASATAGGNTNDSG------SSLGVLGGQHGQLLPELWAGVDRVVRFAPLTAA 728 Query: 770 HIASIAQIQLKRLYKRLEERGYE-IHISDE 798 + + Q+ + +L G IH+S E Sbjct: 729 ERVEVVRRQVSDMATQLAPAGVAGIHLSPE 758 >UniRef50_Q8IM28 ATP-dependent CLP protease, putative n=6 Tax=cellular organisms RepID=Q8IM28_PLAF7 Length = 1341 Score = 466 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 219/765 (28%), Positives = 390/765 (50%), Gaps = 41/765 (5%) Query: 2 RLD-RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLN----QEGGSVSPLLTSAGIN 56 D + + +L L +A A F+ + ++ +++N ++ + IN Sbjct: 333 NFDIKFSENCKLVLHNAVLEAKRKRKIFVNIIDILLSIINIAQEKKHYDFLKYIEELNIN 392 Query: 57 AGQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFV---- 112 L++ + + + + +N + Sbjct: 393 INDLKSLLLSYDEKNYDGNNIYDTNANNTNYNTHNRNIPLNNNNNNNNVSNKGYNNQRLN 452 Query: 113 ------LAALESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTI 166 A + L G + +K I Sbjct: 453 NMNNNEQANHIINSLNNEYLNN-GRDYKYNEDHPFSSNNKFLNPSTSSASSISFMKDCLI 511 Query: 167 DLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIING 226 D+ A++ D GR +EI+R I++L R+ K+NP+LIGE GVGKTAI+E L+ I+ Sbjct: 512 DMVHEAQEKGDDHFFGRKKEIKRIIEILGRKKKSNPLLIGESGVGKTAIIEYLSYLILKD 571 Query: 227 EVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGA 286 VP LK R+ L++G +VAG KYRGEFEE++K +L+++ K++ N ILFIDE+H +VGA Sbjct: 572 NVPYHLKNCRIFQLNLGNIVAGTKYRGEFEEKMKHLLSNMNKKKKN-ILFIDEIHVIVGA 630 Query: 287 GKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDT 346 G +G++DA N+LKP L+ L C+G TT EY ++IE D AL RRF V + + ++T Sbjct: 631 GSGEGSLDASNLLKPFLSSDNLQCIGTTTFQEYSKFIENDKALRRRFNCVTINPFTSKET 690 Query: 347 IAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQID 406 +L+ +K YE +H++ TD ++ + +L+ Y+ PDKAID++DEA +++ + Sbjct: 691 YKLLKKIKYNYEKYHNIYYTDDSLKSIVSLTEDYLPTANFPDKAIDILDEAGVYQKIKYE 750 Query: 407 SKPEEL---DRLDRRIIQLKLEQQ------------------ALMKESDEASKKRLDMLN 445 ++ +RL + I + ++ + E N Sbjct: 751 KFMKQKLRAERLRKIRIHMNTQENNNNNNNNNNNISNNNNDYIISDEDQHIHNNNYGYNN 810 Query: 446 EELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGK 505 ++ ++++++S E+ K + +T K E++ E + Sbjct: 811 YDVINQQKEFSNDEDINKLNDDDTNLRKTYKQEIDNKIKNDENGNNNIKTDTNGNILINN 870 Query: 506 IPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQE 565 + L+ T+ + + + VT I ++++ + I + + E EK+L+++++ Sbjct: 871 VESLQNDTYDETRNLIENVHM--KYVTSDVIENIVSKKSSITYIKKNKKEEEKILKLKEK 928 Query: 566 LHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDS 625 L+ +IGQ + +D +S + ++ + DPN+PIG+ L G +GVGKT + ++ ++F + Sbjct: 929 LNKIIIGQEKVIDILSKYLFKAITNIKDPNKPIGTLLLCGSSGVGKTLCAQVISKYLF-N 987 Query: 626 DEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPD 685 ++ ++ I+MSE+++KHSVS+L G+ PGYVGY+EGG LTE+V+++P+S+IL DE+EKAH + Sbjct: 988 EDNLIVINMSEYIDKHSVSKLFGSYPGYVGYKEGGELTESVKKKPFSIILFDEIEKAHSE 1047 Query: 686 VFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFG 730 V ++LLQ+LD+G LTD +G V F+NT + MT+N+GSD+I + F Sbjct: 1048 VLHVLLQILDNGLLTDSKGNKVSFKNTFIFMTTNVGSDIITDYFK 1092 Score = 98.7 bits (244), Expect = 8e-19, Method: Composition-based stats. Identities = 35/135 (25%), Positives = 66/135 (48%), Gaps = 4/135 (2%) Query: 727 ERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRL-YKR 785 + Y +K + + F PEF+NRIDE ++F ++ I +I Q + L + Sbjct: 1196 KLRTNKWYDELKPDIEEELKKKFLPEFLNRIDEKIIFRQFLKRDIINILQNMIDDLKKRI 1255 Query: 786 LEERGYEIHISDEALKLLS---ENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGK 842 + + + I + + N YD +GAR ++RA+ + IE+P+A ++S P Sbjct: 1256 KKRKNINLIIDKNVINYICSDENNIYDMNFGARSIRRALYKYIEDPIAAFLISNIHEPND 1315 Query: 843 VIRLEVNEDRIVAVQ 857 I +++ D+ + VQ Sbjct: 1316 SIYVQLTNDKKIKVQ 1330 Score = 52.9 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 41/115 (35%), Gaps = 5/115 (4%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 D K AL A+ +A + I HL+ A++ + V +L + I+ Sbjct: 62 FDEYDEKCIKALIMAREVAKNDNENEILLKHLLIAIIRIDSNLVQNILKNFNISLTNFLD 121 Query: 63 DINQALNRLPQVEGTGGD-----VQPSQDLVRVLNLCDKLAQKRGDNFISSELFV 112 + A+N++ + + + S LN +K + I + + Sbjct: 122 KFHVAINKISKSYTNSNNGHNNIYEQSGSAQNNLNEQEKKNISLTNEEIDMKNIL 176 >UniRef50_Q6GDQ0 ATP-dependent Clp protease ATP-binding subunit clpL n=194 Tax=cellular organisms RepID=CLPL_STAAR Length = 701 Score = 461 bits (1186), Expect = e-128, Method: Composition-based stats. Identities = 243/783 (31%), Positives = 380/783 (48%), Gaps = 86/783 (10%) Query: 74 VEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAGATT 133 + + L R++ Q + + V S LA + G + Sbjct: 1 MNNNFFNSDFDSILRRMMQDMQNSNQTSNKKYYINGKEV-----SPEELAQFTQQGGNHS 55 Query: 134 ANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQV 193 A + Q Q L++ +LT+ A G LDPVIGRD+EI+ T +V Sbjct: 56 AEQSAQAFQQAALRQQGQQSGNGNY--LEQIGRNLTQEARDGLLDPVIGRDKEIQETAEV 113 Query: 194 LQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRG 253 L RRTKNNP+L+GE GVGKTAIVEGLAQ I+ G VP +K + ++++D+ +L AG +YRG Sbjct: 114 LSRRTKNNPILVGEAGVGKTAIVEGLAQAIVEGNVPAAIKDKEIISIDISSLEAGTQYRG 173 Query: 254 EFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGA 313 FEE ++ ++ + + N +LF DE+H ++G+G A G+ L L Sbjct: 174 AFEENIQKLVEGVKSSQ-NAVLFFDEIHQIIGSG-ATGSDSGSKGLSDILK--------- 222 Query: 314 TTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAA 373 AL R G + + + A Sbjct: 223 -------------PALSR--------------------GEISIIGATTQDEYRNNIMKDA 249 Query: 374 ATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKES 433 A L+ R+ A D + E IR + ++ + D L Sbjct: 250 A-LTRRFNEVLVNEPSAKDTV-EILKGIREKFETHHQVKLPDDV-----------LKACV 296 Query: 434 DEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVG 493 D + + L + + + ++ T+ +ELE K A Sbjct: 297 DLSIQYIPQRLLPDKAIDVLDITAAHLSAQSPAIDKVTTEKRISELEHDKRKAVSAE--- 353 Query: 494 DLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 553 +Y K +++K++++ + T +I++ + R TGIPVS+M Sbjct: 354 --------EYKKADDIQKEIKSLQDKLENSNGEHTAVATVHDISDTIQRLTGIPVSQMDA 405 Query: 554 SEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613 ++ E+L + L ++IGQ++AV+ VS AIRR+RAG D NRPIGSFLF+GPTGVGKTE Sbjct: 406 NDIERLKNISSRLRSKIIGQDKAVEMVSRAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTE 465 Query: 614 LCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEE-GGYLTEAVRRRPYS 672 L K LA +F + EA++R+DMSE+ + +VS+++G GYVGY++ LTE VRR PYS Sbjct: 466 LAKQLAIDLFGNKEALIRLDMSEYSDTTAVSKMIGTTAGYVGYDDNSNTLTEKVRRNPYS 525 Query: 673 VILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGEL 732 VIL DE+EKA+P + +LLQV+DDG LTDGQG ++F+NT++I TSN G Sbjct: 526 VILFDEIEKANPQILTLLLQVMDDGNLTDGQGNVINFKNTIIICTSNAGF--------GN 577 Query: 733 DYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYE 792 ++ ++ + FRPEF+NR + +V F L + + I + L + L+++G Sbjct: 578 GNDTEEKDIMHEMKKFFRPEFLNRFNGIVEFLHLDKDALQDIVNLLLDDVQVTLDKKGIT 637 Query: 793 IHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDR 852 + +S +A L E GYD GARPL+R ++QQ+ + + L K + ++V ++ Sbjct: 638 MDVSQDAKDWLIEEGYDEELGARPLRRIVEQQVRDKITDYYLDHT--DVKHVDIDVEDNE 695 Query: 853 IVA 855 +V Sbjct: 696 LVV 698 >UniRef50_B0MVC3 Putative uncharacterized protein n=3 Tax=Bacteroidales RepID=B0MVC3_9BACT Length = 819 Score = 455 bits (1169), Expect = e-126, Method: Composition-based stats. Identities = 251/874 (28%), Positives = 393/874 (44%), Gaps = 139/874 (15%) Query: 34 LMSALLNQEGGSVSPLLTSAGIN--AGQLRTDINQALNRLPQVEGTGGDVQ-----PSQD 86 L +L +EG +LTS + Q+ I + + + + + + +++ Sbjct: 33 LTLEILREEGSLAHQILTSRLKDWEIHQICLRIESEIRSVSAPDSSRQNPEEFFPLYTRE 92 Query: 87 LVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTL-ADILKAAGATTANITQAIEQMRG 145 L R+ +S+ +L + T+ + +L I +++M Sbjct: 93 LQRLFAPMHH---------VSTAHALLHIVSDPHTITSQVLAMYHFDAQAIATELQKMTL 143 Query: 146 G----------------------ESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGR 183 + L K+ DLT A +G++DPV+GR Sbjct: 144 EADQTTPPDTNFRPTPELRFIGLREPVRDTPPAEPALLDKFGTDLTYEARRGRIDPVVGR 203 Query: 184 DEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMG 243 + E+ R +Q+L RR KNNP+LIGE GVGK+AIVEGLA R+ EVP ++G+R+ +LD+ Sbjct: 204 EREMERIVQILSRRKKNNPILIGEAGVGKSAIVEGLALRMAADEVPATIRGKRLYSLDVS 263 Query: 244 ALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPAL 303 +L+AG KYRGEFEER++ +L +L +++ + ILFIDE+HT+ GAG G++D N+LKPAL Sbjct: 264 SLLAGTKYRGEFEERMQRLLEELRRKQ-DSILFIDEIHTIAGAGSTQGSLDTANILKPAL 322 Query: 304 ARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHV 363 ARGEL +GATTLDEYR+ IE D ALERRFQK+ V S E+T+ IL + YE HH V Sbjct: 323 ARGELQVIGATTLDEYREDIESDPALERRFQKILVEPASEEETLQILHNIAPHYERHHGV 382 Query: 364 QITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLK 423 + +D A+ A L+ RYI DR PDKAID++DEA + I +Q K E+ R + Sbjct: 383 RYSDEALRACVALTGRYITDRNFPDKAIDVLDEAGARIHLQDKGKTEKPSRKTASREPVG 442 Query: 424 LEQQALMKESDEASKKRLD---------MLNEELSDKERQYSELEEEWKAEKASLSGTQT 474 A ++ D L + E + +E+ + + + Sbjct: 443 AAAGAKTPKNRSRKTAAADTTTVGGAVWTLPSDPGPPEIRAEHIEQVITSMTGIPAERLS 502 Query: 475 IKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDA 534 +A + RV E I L+ + G M + V Sbjct: 503 GSESERLRGLADYLSARVIGQCEAVEKISRSIQRSRAGLKDEGRPIGVFMFVGPTGVGKT 562 Query: 535 EIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADP 594 +A+ L++W + E + L R +++ Sbjct: 563 LLAKELSKW--------LFDENKGL---------------------------IRIDMSEY 587 Query: 595 NRPIGSFLFLG-PTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGY 653 + +G P G L + ++V D E Sbjct: 588 SEKHNVARLIGSPPGYVGYGEGGQLTEAVRRHPYSVVLFDEIEKAH-------------- 633 Query: 654 VGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTV 713 P+VFN LLQ+ D+G LTDG GR VDFRNTV Sbjct: 634 ------------------------------PEVFNTLLQIFDEGHLTDGSGRKVDFRNTV 663 Query: 714 VIMTSNLGSDLIQERFGELDYAHMKE----------LVLGVVSHNFRPEFINRIDEVVVF 763 +I+TSN+GS R ++ Y+ + + F PEF+NRID++V+F Sbjct: 664 IILTSNVGSRAAAIRSTQVGYSTCSKSDTQQKAPQSEYRRALEETFAPEFLNRIDDIVIF 723 Query: 764 HPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQ 823 L + I ++LK L R + GY++ I+DEA + L+ GY YG R L+R + + Sbjct: 724 RTLDLSDVERIIDLELKGLLSRTDRLGYKVEITDEAKRTLAAIGYQRKYGVRALRRTLLE 783 Query: 824 QIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857 +IE PL+ I+ G+L G+ + +E + ++ V ++ Sbjct: 784 RIEEPLSGLIIDGKLHSGERVIVEPDGEKEVILR 817 >UniRef50_UPI0001C3229B ATPase AAA-2 domain protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3229B Length = 761 Score = 450 bits (1158), Expect = e-125, Method: Composition-based stats. Identities = 265/714 (37%), Positives = 384/714 (53%), Gaps = 80/714 (11%) Query: 155 EDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTA 214 + L ++ DLTE A G++D VIGRD+EI +TI+VL RR KNN VLIGE GVGKTA Sbjct: 100 DSSTPTLDQFGRDLTEDARVGRIDAVIGRDDEIEQTIEVLARRRKNNAVLIGEAGVGKTA 159 Query: 215 IVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVI 274 I EGLA RI EVPE L+ R++++D+G +VAGA++RG+FE+RLK L ++ +G V+ Sbjct: 160 IAEGLALRIARNEVPETLREVRIVSVDLGGMVAGAQFRGQFEQRLKTALEEVVATDGKVV 219 Query: 275 LFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334 LFIDELHT+VGAG A+GAMDA N+LKP LARGEL VGATTL EYR+ IEKD AL RRF Sbjct: 220 LFIDELHTIVGAGGAEGAMDAANLLKPLLARGELRVVGATTLAEYRK-IEKDGALARRFA 278 Query: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394 V V EPSVE T+AILRGL+ YE HH V+I D A+ AAA LS RY+ + LPDKAIDL+ Sbjct: 279 AVHVEEPSVEATVAILRGLRPAYEEHHGVKIADAALDAAARLSDRYVTEYHLPDKAIDLM 338 Query: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQ 454 D+A++ + + + ++ RL R + L+ E+QA + D + + L + + E+Q Sbjct: 339 DQASARVHLHGERS--DVARLQRELHYLQAEKQAAV---DAEAYEDAADLRKRIDGVEQQ 393 Query: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVG-DLARMSELQYGKIPELEKQL 513 + L + +S T T + + +A A R G + + + K+ ELE L Sbjct: 394 LAALAADGADAASSTGDTGTASLAVTETDVAAVVAARTGIPVGELVAGELEKLQELEADL 453 Query: 514 EAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQ 573 A + + + + + A R+ SE ++ L L +G+ Sbjct: 454 HARVVGQDGAVETVADTIRRA---------------RVGLSEGDRPLGTFLFLGPTGVGK 498 Query: 574 NEAVDAVSNAIR-----RSRAGLADPNRPIGSFLFLG-PTGVGKTELCKALANFMFDSDE 627 E V A+S + R +++ P +G P G L + Sbjct: 499 TELVKALSERLFGTEKSLVRIDMSEFREPHTVARLIGSPPGYVGYGDGGQLTEPVRRRPY 558 Query: 628 AMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVF 687 ++V +D E P+V+ Sbjct: 559 SVVLLDEIEKAH--------------------------------------------PEVW 574 Query: 688 NILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERF-------GELDYAHMKEL 740 N+LLQV+DDGRLTDG+GRTVDF NTV++MTSNLG+ +++ GE + + Sbjct: 575 NVLLQVMDDGRLTDGEGRTVDFANTVLVMTSNLGAPKSKKQALGFATSDGEGERGDVAAQ 634 Query: 741 VLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLE-ERGYEIHISDEA 799 ++ F PEF+NRIDE+VVF L + + I ++ ++R+ +RL ER E+ + + Sbjct: 635 MVAAAKRAFLPEFVNRIDELVVFDALSAEQVERIGELIVERVEERLASERDIELEVEPKL 694 Query: 800 LKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRI 853 + LS G+DP YGARPL+R +++ +E L + I+ G L G + I Sbjct: 695 IARLSREGFDPEYGARPLQRHVRRTLEKELTKAIVEGRLNDGDRVVASDAGGAI 748 >UniRef50_B6AFU4 Chaperone clpB family protein n=1 Tax=Cryptosporidium muris RN66 RepID=B6AFU4_9CRYT Length = 1270 Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats. Identities = 251/972 (25%), Positives = 424/972 (43%), Gaps = 135/972 (13%) Query: 3 LDRLTNKFQLALADA---QSLALGHD--NQFIEPLHLMSALLNQEGGSVSPLL------- 50 ++ + +ADA A + + P +L +L ++ S Sbjct: 263 IELFSLDLVCTIADATRFVQQAATAGYISNILTPTYLFLEILKRDKQSNKENCFENNNFK 322 Query: 51 --TSAGINAGQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISS 108 + + I ++ + ++ +V + + K + + Sbjct: 323 FRSESEIKILDFDSEDIIRTDDFIVSNTGVENLSEGTPVVNLFDYILKFISSYNITYYNV 382 Query: 109 ELFVLAALESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDL 168 +L E T L+ T + S + + + +DL Sbjct: 383 FDNLLNKHEEIYTFEKRLENHLNNTEVNKVHEVPSKSFISRLYDLDTKEHSKVSRNIVDL 442 Query: 169 TERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEV 228 T+ A +GK+ P++GR E+ +VL R K++ +LIG PG GKT + E LAQRII+G V Sbjct: 443 TDLASKGKIKPLVGRLNEMALIERVLSREGKSSVMLIGPPGTGKTTLAEALAQRIIDGTV 502 Query: 229 PEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGK 288 L G +V ++D+ +++G+ +RGEFE +L +L + VILF DE+H ++G+G+ Sbjct: 503 TSFLLGYKVFSVDISNILSGSTFRGEFEAKLHDILKLVNGHNQKVILFFDEMHLIIGSGR 562 Query: 289 A--DGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDT 346 + GAMD N+LK AL +GE+ +GATT +EY YI+ D A RRF+ + + EPS+++T Sbjct: 563 SSNGGAMDGANILKSALGKGEVKIIGATTDEEYFMYIKGDKAFARRFENIHLVEPSIDET 622 Query: 347 IAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQID 406 +L GL+ +E + V D AI A LS +YI D PDKA+DL++ AAS +R Sbjct: 623 KYLLLGLRSDFENTYGVFFCDDAIEYAVFLSDKYIGDNNQPDKALDLLNSAASMVRSDSY 682 Query: 407 SKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKA-E 465 S + + +++ +++L + + EL +K+R K Sbjct: 683 SSSNVTNLANILKEEIQQIERSLKLYTANVDDLKSITFENELRNKQRVLKLKYNRLKILM 742 Query: 466 KASLSGTQTIKAELEQA----------------------KIAIEQARRVGDLA------- 496 + Q + E+A D Sbjct: 743 SNLILYIQQYRYLRNNLALFNLAYNLYPMQKYCPVSNISTKMHEKATFSEDFIPNFKKDL 802 Query: 497 ---RMSELQYGKIPEL--------------EKQLEAATQLEGKTMRLLRNKVTDAEIAEV 539 ++E+ K EL K E + + + +LR ++ ++ Sbjct: 803 NIGELNEMDQEKFLELIKDNFNGEFNAHLDMKDEENSECITTEHPIILRRTRNIDDLRKI 862 Query: 540 ---LARWTGIP-----------------VSRMMESEREKLL-------------RMEQEL 566 ++ ++G+P VS+ E E+L+ + L Sbjct: 863 IRKISIYSGLPITPTNIGEVDASHIAYVVSQRTEIPMERLIIEIGYDTLINTAVNFTEIL 922 Query: 567 HHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMF--- 623 VIGQN+A + +SN + R++ GL NRP GSFLF+GPTGVGKTE+ KA+A + Sbjct: 923 SKFVIGQNDAKEMISNILIRAQVGLIPSNRPSGSFLFIGPTGVGKTEMAKAVAATIHSIK 982 Query: 624 -----------DSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYS 672 + +++ DMSEF SV RL+G G L +AV +RP+S Sbjct: 983 GKQEGFFTTTKSIELPLIKFDMSEFSYSGSVLRLIGEG------NFNGELIKAVNKRPFS 1036 Query: 673 VILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFG-- 730 VIL DE+EKAHP VF + LQ+L +G+L+ G + DF ++I TSN+G+ I ER+ Sbjct: 1037 VILFDELEKAHPSVFALFLQILSEGKLSGPLG-SADFTKAIIIATSNVGAQQIIERYTRN 1095 Query: 731 --------------ELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQ 776 + D + ++ ++ F E INR D +V F PL I I + Sbjct: 1096 KNTKNSTSNNLYTVDDDAETIPTELMHTLTKTFSYELINRFDALVTFRPLERVEIIHIIK 1155 Query: 777 IQLKRLYKRLEERGYEIHISDE--ALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQIL 834 L ++++ ++ L + E Y+ ++GARP+ + I+ +I P+A + Sbjct: 1156 NCFTDLVHQIKKSRQVEFVTPSNLLLLYIMEKSYNDMFGARPVCKYIEDKILTPIAILLQ 1215 Query: 835 SGELVPGKVIRL 846 + ++ G I + Sbjct: 1216 NRQIESGDKIEV 1227 >UniRef50_Q93ZM4 AT3g48870/T21J18_140 n=31 Tax=cellular organisms RepID=Q93ZM4_ARATH Length = 558 Score = 434 bits (1116), Expect = e-120, Method: Composition-based stats. Identities = 202/445 (45%), Positives = 285/445 (64%), Gaps = 10/445 (2%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 +R T K + +Q A + F+ ++ L+ + G + +L S GIN R Sbjct: 114 MFERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDSR 173 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG- 120 ++ + + R ++ + RVL L + A++ G N+I SE +L L Sbjct: 174 VEVEKIIGRGSGFVAV--EIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEG 231 Query: 121 TLADILKAAGATTANITQAIEQMRGGESV------NDQGAEDQRQALKKYTIDLTERAEQ 174 A +L+ GA +NI + +M G + + L++Y +LT+ AE+ Sbjct: 232 VAARVLENLGADPSNIRTQVIRMVGENNEVTASVGGGSSGNSKMPTLEEYGTNLTKLAEE 291 Query: 175 GKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKG 234 GKLDPV+GR +I R +Q+L RRTKNNP LIGEPGVGKTAI EGLAQRI +G+VPE ++G Sbjct: 292 GKLDPVVGRQPQIERVVQILARRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPETIEG 351 Query: 235 RRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMD 294 + V+ LDMG LVAG KYRGEFEERLK ++ ++ + + +ILFIDE+HT++GAG A+GA+D Sbjct: 352 KTVITLDMGLLVAGTKYRGEFEERLKKLMEEIRQSD-EIILFIDEVHTLIGAGAAEGAID 410 Query: 295 AGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLK 354 A N+LKPALARGEL C+GATT+DEYR++IEKD ALERRFQ V V EP+VE I IL+GL+ Sbjct: 411 AANILKPALARGELQCIGATTIDEYRKHIEKDPALERRFQPVKVPEPTVEGAIQILQGLR 470 Query: 355 ERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDR 414 ERYE+HH ++ TD A+VAAA LSH+YI+DR LPDKAIDLIDEA S +R++ PEE Sbjct: 471 ERYEIHHKLRYTDEALVAAAQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARE 530 Query: 415 LDRRIIQLKLEQQALMKESDEASKK 439 L++++ Q+ E+ +++ Sbjct: 531 LEKQLRQITKEKNEAVRKPRLRDGW 555 >UniRef50_B0JIB9 ATP-dependent Clp protease ATPase subunit n=11 Tax=cellular organisms RepID=B0JIB9_MICAN Length = 795 Score = 434 bits (1116), Expect = e-120, Method: Composition-based stats. Identities = 198/586 (33%), Positives = 304/586 (51%), Gaps = 21/586 (3%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 + K A+ AQ A + + HL+ L+ + + + +L + + R Sbjct: 1 MFEYFNQKAIKAVMFAQEEARRTGHSVVGTEHLLLGLIGEATATAALILKDLKVTLHESR 60 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESR-G 120 I R + ++ + ++ + A++ G+N I++E +LA Sbjct: 61 RLIEGMTGRG--TGYSPVNIPFTPKAKKMFEQAFQEARQLGENAIATEHLLLAITSDPES 118 Query: 121 TLADILKAAGATTANITQAIEQMRGGE----------SVNDQGAEDQRQALKKYTIDLTE 170 A IL G + + + G + DQ Q L +Y +L + Sbjct: 119 LAAKILIMQGVDLIKLRGLLIKNAGEKVASGRFTAKSDYEDQKNAPQGGILAQYGRNLNQ 178 Query: 171 RAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPE 230 + GK+DPVIGR+ EI R +Q+L RRTK+NP+L+GEPGVGKTAI EGLAQRI NG++PE Sbjct: 179 EVKNGKIDPVIGREPEIERVVQILGRRTKSNPILLGEPGVGKTAIAEGLAQRIHNGDIPE 238 Query: 231 GLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKAD 290 L+ ++V+ALDMG+L+AG ++RG+FEERLKG++ ++ K GN+ILFIDE+HT+VGAG Sbjct: 239 LLQDKQVIALDMGSLLAGTRFRGDFEERLKGIVEEVRKS-GNIILFIDEIHTLVGAGSMG 297 Query: 291 GAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAIL 350 GAMDA N+LKPALARGEL C+GATTLDEY+++IE+DAALERRFQ V V EP+ E I IL Sbjct: 298 GAMDASNLLKPALARGELQCLGATTLDEYKRHIERDAALERRFQPVMVGEPTKEQAIEIL 357 Query: 351 RGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPE 410 RGLK YE H V+ AI AA LS RYI DR LPDKAIDL+DEA S ++ + Sbjct: 358 RGLKATYEDFHQVKYDQKAIEAAVNLSSRYINDRFLPDKAIDLLDEAGSRTHLRYSLQST 417 Query: 411 ELDRLDRRIIQLKLEQQALMKESDEASKKRLDM-----LNEELSDKERQYSELEEEWKAE 465 + + E + +++E ++ ++ E + + + Sbjct: 418 SPAEVREESPLINPESLIPVVDAEEIAQIVAAWTGIPVTQLTETESESLLNLECQLHERI 477 Query: 466 KASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMR 525 + + +A++ ++ R + EL K L L G Sbjct: 478 IGQQEAVNAVSRAIRRARVNLKNPNRPIASFIFAGPTGVGKTELTKALAKL--LFGSESS 535 Query: 526 LLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVI 571 ++R +++ + +++ G P + +E +L + +RV+ Sbjct: 536 MIRLDMSEFMESHTVSKLIGAPPGYIGYNEGGQLTEAVRRQPYRVV 581 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 242/823 (29%), Positives = 389/823 (47%), Gaps = 98/823 (11%) Query: 82 QPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAGATTANITQAIE 141 +Q ++ + + A++ G + + +E +L + A + I + ++ Sbjct: 4 YFNQKAIKAVMFAQEEARRTGHSVVGTEHLLLGLIGEATATAAL----------ILKDLK 53 Query: 142 QMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNN 201 +G + I T +A++ +E R+ + N Sbjct: 54 VTLHESRRLIEGMTGRGTGYSPVNIPFTPKAKKMFEQAF----QEARQLGE--------N 101 Query: 202 PVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKG 261 + + T+ E LA +I+ + + +K R +L + G VA ++ K Sbjct: 102 AIATEHLLLAITSDPESLAAKILIMQGVDLIKLRGLLIKNAGEKVASGRFTA------KS 155 Query: 262 VLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQ 321 D IL G+ + P + R E + Sbjct: 156 DYEDQKNAPQGGIL--------AQYGRNLNQEVKNGKIDPVIGR----------EPEIER 197 Query: 322 YIEKDAALERRF--QKVFVAEPSVEDTIAILRGLKER---------YELHHHVQITDPAI 370 ++ L RR + + EP V T AI GL +R + + + ++ Sbjct: 198 VVQ---ILGRRTKSNPILLGEPGVGKT-AIAEGLAQRIHNGDIPELLQDKQVIALDMGSL 253 Query: 371 VAAATLSHRY-------IADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLK 423 +A + + + + I IDE + + + L + + Sbjct: 254 LAGTRFRGDFEERLKGIVEEVRKSGNIILFIDEIHTLVGAGSMGGAMDASNL-LKPALAR 312 Query: 424 LEQQALMKESDEASKKRLDMLN------EELSDKERQYSELEEEWKAEKASLSGTQTIKA 477 E Q L + + K+ ++ + + E + E + KA+ +K Sbjct: 313 GELQCLGATTLDEYKRHIERDAALERRFQPVMVGEPTKEQAIEILRGLKATYEDFHQVKY 372 Query: 478 ELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNK------- 530 + + + A+ + R + + + + E + L+ + +R + Sbjct: 373 DQKAIEAAVNLSSRYINDRFLPDKAIDLLDEAGSRTHLRYSLQSTSPAEVREESPLINPE 432 Query: 531 -----VTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIR 585 V EIA+++A WTGIPV+++ E+E E LL +E +LH R+IGQ EAV+AVS AIR Sbjct: 433 SLIPVVDAEEIAQIVAAWTGIPVTQLTETESESLLNLECQLHERIIGQQEAVNAVSRAIR 492 Query: 586 RSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSR 645 R+R L +PNRPI SF+F GPTGVGKTEL KALA +F S+ +M+R+DMSEFME H+VS+ Sbjct: 493 RARVNLKNPNRPIASFIFAGPTGVGKTELTKALAKLLFGSESSMIRLDMSEFMESHTVSK 552 Query: 646 LVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGR 705 L+GAPPGY+GY EGG LTEAVRR+PY V+L DE+EKAHPDVFN+LLQ+L+DG LTD QGR Sbjct: 553 LIGAPPGYIGYNEGGQLTEAVRRQPYRVVLFDEIEKAHPDVFNLLLQLLEDGHLTDSQGR 612 Query: 706 TVDFRNTVVIMTSNLGSD-----------LIQERFGELDYAHMKELVLGVVSHNFRPEFI 754 VDF+NT++IMTSN+GS I + F + Y + V + FRPEF+ Sbjct: 613 RVDFKNTLIIMTSNIGSKVIEKGGNSLGFEIADDFAQSRYQQISNRVTEELKQYFRPEFL 672 Query: 755 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 814 NR+DE++VF L + + IA I + L K+L E+G + ++ L+ GYDP YGA Sbjct: 673 NRLDEIIVFRQLTREEVTQIADILIADLAKQLTEKGISVEVTAAFKDLVINEGYDPSYGA 732 Query: 815 RPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857 RPL+RA+ +++E+ LA +LSG++ G L+V + +V V Sbjct: 733 RPLRRALTRRLEDSLAVAMLSGKVNSGDHAILDVTAEAVVTVS 775 >UniRef50_A4W448 ATPases with chaperone activity, ATP-binding subunit n=73 Tax=Streptococcus RepID=A4W448_STRS2 Length = 817 Score = 429 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 251/876 (28%), Positives = 393/876 (44%), Gaps = 91/876 (10%) Query: 5 RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDI 64 +++ Q DAQ +A + + ++E HL+ A + +L + + Sbjct: 2 KISRGLQGVYEDAQLIAQRYSSDYLETWHLLLAFVINPDTVAGAILAEYPADVLDYERAV 61 Query: 65 NQALNRLPQVEGTGGDVQPSQDLVRVLN-LCDKLAQKRGDNFISSELFVLAALES-RGTL 122 + R E PS V+ L +K+A+ + +E + L R T Sbjct: 62 YMVMGRRYHEELESFFFLPSSKRVKELQVFAEKIAEIVKSKGLGTEHIFMGMLLDKRSTA 121 Query: 123 ADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIG 182 + IL G + ++D+ + L + L+ G Sbjct: 122 SQILDQVGFHFED------------------SDDKVRFLDL----------RKNLEAKAG 153 Query: 183 RDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDM 242 +E + I+ + + K +G +G T G G D+ Sbjct: 154 FTKEHLKAIRTMTKGGKPKQATVGNM-MGMTQSQSG---------------GLEDYTRDL 197 Query: 243 GALV-AGA--KYRGEFEE--RLKGVLNDLAKQEGNVILFIDELHTMVGAGKA----DGAM 293 AL +G G EE R+ +L+ K ++ T + G A +G + Sbjct: 198 TALARSGQLEPVIGRDEEISRMLQILSRKTKNNPVLVGDAGVGKTALALGLAQRIANGEV 257 Query: 294 DAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGL 353 A + L ++ + T E R + I + L Sbjct: 258 PASLVNMRILELDLMNVIAGTRFR---------GDFEERMNNIINDIEEDGRVILFIDEL 308 Query: 354 KERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELD 413 + D + AA L P + + ++ + + E+ Sbjct: 309 HTIMGSGSGI---DSILDAANIL---------KPALSRGTLRTVGATTQDEYQKHIEKDA 356 Query: 414 RLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQ 473 L RR ++ +E+ ++ + Q + + Sbjct: 357 ALVRRFAKVTIEEPSVADSVAILQGLKPAYEAHHKVTISDQAVVTAVAYAKRYLTSKNLP 416 Query: 474 TIKAELEQAKIAIEQARRVGDLARMS------ELQYGKIPELEKQLEAATQLEGKTMRLL 527 +L A Q R G + L GK + + L A + E + Sbjct: 417 DSAIDLLDEASATVQNRAKGQVEEGGLTALDQALMAGKYKTVTQLLLKAQEAENQATSY- 475 Query: 528 RNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRS 587 +VT+ +I L+R +GIPV+++ +++ +K L +EQELH RVIGQ EA+ AVS AIRR+ Sbjct: 476 SLEVTEEDILATLSRLSGIPVTKLSQTDAKKYLNLEQELHKRVIGQEEAISAVSRAIRRN 535 Query: 588 RAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLV 647 ++G+ +RP GSF+FLGPTGVGKTEL KALA +FD + A++R DMSE+MEK + SRL Sbjct: 536 QSGIRTGHRPSGSFMFLGPTGVGKTELAKALAEILFDDESALIRFDMSEYMEKFAASRLN 595 Query: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTV 707 GAPPGYVGYEEGG LTE VR +PYSV+L DE+EKAHPD+FN+LLQVLDDG LTD +GR V Sbjct: 596 GAPPGYVGYEEGGELTEKVRNKPYSVLLFDELEKAHPDIFNVLLQVLDDGVLTDRKGRKV 655 Query: 708 DFRNTVVIMTSNLGSDLIQERFG--------ELDYAHMKELVLGVVSHNFRPEFINRIDE 759 DF NTV+IMTSNLG+ +++ H+++ + + +RPEFINRIDE Sbjct: 656 DFSNTVIIMTSNLGATALRDDKTVGFGALDLSKSQEHVEKRIFEALKKAYRPEFINRIDE 715 Query: 760 VVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKR 819 VVFH L E + + ++ +K L +G + + ALKLL++ GYDP GARPL+R Sbjct: 716 KVVFHSLTEADMQDVVKVMVKPLIAVAASKGITLKLQASALKLLAKEGYDPEMGARPLRR 775 Query: 820 AIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855 +Q ++E+PLA+ +L GEL G +++ V +++ Sbjct: 776 LLQTKLEDPLAEMLLRGELPAGVTLKVGVKAEQLKF 811 >UniRef50_Q1IZ22 ATPase AAA-2 n=8 Tax=Deinococci RepID=Q1IZ22_DEIGD Length = 745 Score = 421 bits (1081), Expect = e-116, Method: Composition-based stats. Identities = 202/578 (34%), Positives = 291/578 (50%), Gaps = 17/578 (2%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 ++R ++ +L A+ + + P HL+ L+ + G+ + +L+ G + LR Sbjct: 1 MNRYDDRARLVFHYAREEGNRLGHAMVGPEHLLLGLMREG-GTAATILSEFGASLDGLRR 59 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES-RGT 121 + + + R + RV+ L A+ G S+E +L + G Sbjct: 60 RVEEIIGRGEGNRLNDA-PSITPRARRVMELASAEARSLGAQVTSTEHILLGIIREGDGV 118 Query: 122 LADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVI 181 IL+ I + G S L +Y DLT++A +GKLDPVI Sbjct: 119 AFRILQELTKDVDTIRWRVLAQGDGSSGKAAKPVAT-PFLDEYGRDLTKQAREGKLDPVI 177 Query: 182 GRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALD 241 GR EEIRR Q+L RRTKNNPVLIG+PGVGKTAIVEGLA I P L G R+++LD Sbjct: 178 GRSEEIRRVTQILTRRTKNNPVLIGDPGVGKTAIVEGLALAIFEKRTPPNLHGVRLVSLD 237 Query: 242 MGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKP 301 + +VAG KYRGEFEERL+ ++ +L V+ FIDELHT+VGAG A+G +DA N+LKP Sbjct: 238 LSGVVAGTKYRGEFEERLRQIIEELR--NAKVMAFIDELHTLVGAGGAEGTLDAANILKP 295 Query: 302 ALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHH 361 AL+RGE+ +GATT EY +YIEKDAALERRFQ V V EPS +T+ ILRGL+ RYE HH Sbjct: 296 ALSRGEIQVIGATTTGEYHRYIEKDAALERRFQPVIVLEPSPAETLQILRGLRPRYEEHH 355 Query: 362 HVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQ 421 VQI + A+ A + R + R PDKAIDLIDEAAS +R+ + + D + Sbjct: 356 GVQIPESALELAVRIGERSLPGRNFPDKAIDLIDEAASRVRLNMSVGLPVSETEDGEPMV 415 Query: 422 LKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQ 481 + + + + D +LSD E Q + + + + L + Sbjct: 416 SR---EDIESVINSMGGIYSDESAGQLSDLEEQLQ------EQVYGQPEAIKALSSALRR 466 Query: 482 AKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLA 541 A++ + RV L K L A L G L+R +++ + A ++ Sbjct: 467 ARVGLGGRTRVSASFLFVGPSGVGKTHLAKAL--AKTLFGSERSLIRVDMSEFQEAHSIS 524 Query: 542 RWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDA 579 + G P + + +L + VI +E A Sbjct: 525 KLIGSPPGYVGFEQGGRLTEAVRRQPFSVILLDEIEKA 562 Score = 319 bits (818), Expect = 2e-85, Method: Composition-based stats. Identities = 205/811 (25%), Positives = 345/811 (42%), Gaps = 113/811 (13%) Query: 82 QPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAGATTANITQAIE 141 + V + + + G + E +L + GT A IL GA+ + + +E Sbjct: 3 RYDDRARLVFHYAREEGNRLGHAMVGPEHLLLGLMREGGTAATILSEFGASLDGLRRRVE 62 Query: 142 QMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNN 201 ++ G N + ++L + ++ T +L Sbjct: 63 EIIGRGEGNRLNDAPSITPRARRVMELASAEARSLG-------AQVTSTEHILL------ 109 Query: 202 PVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKG 261 G +G+A RI L K R+ Sbjct: 110 ---------GIIREGDGVAFRI---------------------LQELTKDVDTIRWRVLA 139 Query: 262 VLNDLAKQEGNVIL--FIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319 + + + + F+DE + +G +D P + R +E Sbjct: 140 QGDGSSGKAAKPVATPFLDEYGRDLTKQAREGKLD------PVIGR----------SEEI 183 Query: 320 RQYIEKDAALERRF--QKVFVAEPSVEDTIAILRGLKERYELH-----HHVQITDPAIVA 372 R+ + L RR V + +P V T + +E H V++ + Sbjct: 184 RRVTQ---ILTRRTKNNPVLIGDPGVGKTAIVEGLALAIFEKRTPPNLHGVRLVSLDLSG 240 Query: 373 AATLSH---------RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLK 423 + R I + K + IDE + + + + + + Sbjct: 241 VVAGTKYRGEFEERLRQIIEELRNAKVMAFIDELHTLVGAGGAEGTLDAANI-LKPALSR 299 Query: 424 LEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAK 483 E Q + + + ++ ER++ + + +L + ++ E+ Sbjct: 300 GEIQVIGATTTGEYHRYIEKDAA----LERRFQPVIVLEPSPAETLQILRGLRPRYEEHH 355 Query: 484 ------IAIEQARRVGDLARMSELQYGKIPELEKQ------LEAATQLEGKTMRLLRNKV 531 A+E A R+G+ + K +L + L + L V Sbjct: 356 GVQIPESALELAVRIGERSLPGRNFPDKAIDLIDEAASRVRLNMSVGLPVSETEDGEPMV 415 Query: 532 TDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGL 591 + +I V+ GI + +L +E++L +V GQ EA+ A+S+A+RR+R GL Sbjct: 416 SREDIESVINSMGGI----YSDESAGQLSDLEEQLQEQVYGQPEAIKALSSALRRARVGL 471 Query: 592 ADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPP 651 R SFLF+GP+GVGKT L KALA +F S+ +++R+DMSEF E HS+S+L+G+PP Sbjct: 472 GGRTRVSASFLFVGPSGVGKTHLAKALAKTLFGSERSLIRVDMSEFQEAHSISKLIGSPP 531 Query: 652 GYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRN 711 GYVG+E+GG LTEAVRR+P+SVILLDE+EKAHPDV+N LQVLDDGRLTDG GRTVDFR Sbjct: 532 GYVGFEQGGRLTEAVRRQPFSVILLDEIEKAHPDVYNTFLQVLDDGRLTDGLGRTVDFRR 591 Query: 712 TVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHI 771 T++IMTSN G ++ + ++ + + + F PEF++R+D+V+ F PLGE + Sbjct: 592 TIIIMTSNTGFNV----NPTVGFSPVTPDNNAPLRNIFTPEFLDRLDDVIRFRPLGEDEL 647 Query: 772 ASIAQIQLKRLYKRLEERGYEIHISDEALKLLSE--NGYDPVYGA---RPLKRAIQQQIE 826 +AQ L + + L R + L P + R L+ ++++IE Sbjct: 648 VRVAQQLLGEMREELASRELNVTFDPAIAAWLVSKLKARSPKHAVGSSRQLRTLLREEIE 707 Query: 827 NPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857 +PLA +++ G+ +R+ + +D I + Sbjct: 708 DPLALELIGN---AGEELRVVLGQDGIQFER 735 >UniRef50_Q8KA87 Probable chaperone protein clpB 2 n=15 Tax=cellular organisms RepID=CLPB2_CHLTE Length = 442 Score = 417 bits (1072), Expect = e-115, Method: Composition-based stats. Identities = 235/435 (54%), Positives = 312/435 (71%), Gaps = 1/435 (0%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 ++ T K Q AL A LA NQ IEP HL+S +L + L Sbjct: 3 FDPNKFTVKAQEALQAASMLASSKQNQQIEPEHLLSVMLGDHDNIACQIARKLETPVDTL 62 Query: 61 RTDINQALNRLPQVEGTGGD-VQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESR 119 + +++ ++R+P+V G S DL +V + K A++ D +ISSE +A E+ Sbjct: 63 LSVVDREIDRIPKVTGASATGQYISSDLGKVFDTALKEAEQLKDEYISSEHLFIAMSEAG 122 Query: 120 GTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDP 179 ++ +LK AG I + + RG + V Q AE+ Q+LKKY+ +L + +GKLDP Sbjct: 123 VKVSKLLKDAGIDRNAILKVLTSFRGSQRVTSQNAEESYQSLKKYSRNLNDLVIKGKLDP 182 Query: 180 VIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLA 239 VIGRD+EIRR +Q+L RRTKNNPVLIGEPGVGKTAIVEG+AQRI+ G+VPE LK +++ A Sbjct: 183 VIGRDDEIRRVLQILSRRTKNNPVLIGEPGVGKTAIVEGIAQRIVGGDVPENLKSKQIAA 242 Query: 240 LDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNML 299 LD+ ALVAG K+RGEFEERLK ++ ++ +G VILFIDELH +VGAG A+G+MDA N+L Sbjct: 243 LDIAALVAGTKFRGEFEERLKALVKEVQASDGEVILFIDELHLLVGAGSAEGSMDAANIL 302 Query: 300 KPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYEL 359 KPALARGEL C+GATTLDEYR++IEKDAALERRFQ V V +PSVEDT++ILRGLKE+YE+ Sbjct: 303 KPALARGELRCIGATTLDEYRKHIEKDAALERRFQTVIVDQPSVEDTVSILRGLKEKYEI 362 Query: 360 HHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRI 419 HH V+I D A+VAAA LS+RYIADR LPDKAIDLIDEA S +R++IDS+PEELDR++R + Sbjct: 363 HHGVRIKDAALVAAAELSNRYIADRFLPDKAIDLIDEACSRLRLEIDSEPEELDRINREL 422 Query: 420 IQLKLEQQALMKESD 434 +L++E++AL +E + Sbjct: 423 RRLEIEREALKRELE 437 >UniRef50_A3CMZ1 ATPases with chaperone activity, ATP-binding subunit, putative n=1 Tax=Streptococcus sanguinis SK36 RepID=A3CMZ1_STRSV Length = 747 Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats. Identities = 232/779 (29%), Positives = 389/779 (49%), Gaps = 50/779 (6%) Query: 83 PSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAGATTANITQAIEQ 142 + L VLN +LA ++ + + + + + I Q Sbjct: 5 YTNLLQEVLNAAKELAIQKHNYQVDIPHVWTVLTQPQAFALEFYTGLDLDINEFISVINQ 64 Query: 143 MRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQR-RTKNN 201 V ++ ++Y+ L + + + RDE + +L + N Sbjct: 65 ELAKIPVFSHTDTNRYG--RQYSQRLKNLLDDAEAERAELRDEVVTVEHLILSLFHQQRN 122 Query: 202 PVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDM-GALVAGAKYRGEFEERLK 260 P+ + K A G+ + ++ ++ + +G+R ++ A +KY F + L Sbjct: 123 PITV----FLKQA---GIDKELVAAKLNKARQGKRAISPSQESRYQALSKYATNFNQWL- 174 Query: 261 GVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYR 320 + + VI DE+ ++ +A +L G+ + Sbjct: 175 -----ADQTDRQVIGRKDEIDDIIRVLCRKEKSNA--ILLGFPGVGKSKVI----EGVVG 223 Query: 321 QYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQ-ITDPAIVAAATLSHR 379 + + D + + E + ++ G K R E + + D +VA Sbjct: 224 RLLADDVP-----EHLLGKEVFKLNLGGLIAGTKYRGEFEERFKAVLDEVLVA------- 271 Query: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439 K I I++ + + L + ++ Q ++ + A+ + Sbjct: 272 -------KGKIILYIEDIHQIVTAGRTEGSLDAGNLLKPLLAQG--QINIIGTTTFAAYR 322 Query: 440 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLAR-- 497 L++ L + ++ E + A L G + + ++ E + L+ Sbjct: 323 ESFELDQALEGRFQRVRIEEPDQDKALAILQGLRENYQDFHGVRLTDEALQAAISLSIRY 382 Query: 498 -MSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESER 556 K +L + A +++ + R V+ +IA ++ R TGI V +M++ER Sbjct: 383 LSDRYLPDKALDLIDEACAVKKIQLGQAQTERPDVSREDIASIVERITGIKVQGIMDNER 442 Query: 557 EKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCK 616 E LL +++ L R++GQ++AV VS AI RSRAG+ +P RPIGSFLFLGPTGVGKT L K Sbjct: 443 EHLLNLDKLLRQRIVGQDQAVQKVSEAILRSRAGIQNPKRPIGSFLFLGPTGVGKTALAK 502 Query: 617 ALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILL 676 ALA +F ++ MVR+DMSE+MEKH+V+RLVG PPGYVG+EEGG LTEAVRRR YS++LL Sbjct: 503 ALAERLFGNELEMVRLDMSEYMEKHAVARLVGPPPGYVGFEEGGQLTEAVRRRLYSIVLL 562 Query: 677 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD--Y 734 DE+EKAHPDVFN LLQVLD+GRLTD +GRT+DF+NT++IMTSN+GS I E Sbjct: 563 DEIEKAHPDVFNTLLQVLDEGRLTDSKGRTIDFKNTILIMTSNIGSQQILESLKSEQGLT 622 Query: 735 AHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIH 794 A +E VL ++ H+F+PEF+NRIDE VVF+PL + + +I +I +++L +RLE + ++H Sbjct: 623 AETQEEVLSLLQHSFKPEFLNRIDETVVFNPLRAEDMINIVKIMVRQLQERLEHQKIQLH 682 Query: 795 ISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRI 853 +S+E L++ GY P +GARP++R+I + +E PLA+ ++ + +++ + + ++ Sbjct: 683 LSEEVYAFLAQKGYQPEFGARPIQRSIMRYLETPLARYLVENKETTEMTVQVSLKDGQL 741 Score = 351 bits (900), Expect = 7e-95, Method: Composition-based stats. Identities = 180/582 (30%), Positives = 298/582 (51%), Gaps = 18/582 (3%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 + TN Q L A+ LA+ N ++ H+ +L Q T ++ + Sbjct: 1 MTEHYTNLLQEVLNAAKELAIQKHNYQVDIPHV-WTVLTQPQAFALEFYTGLDLDINEFI 59 Query: 62 TDINQALNRLPQVEGTGGDVQ---PSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES 118 + INQ L ++P T + SQ L +L+ + + D ++ E +L+ Sbjct: 60 SVINQELAKIPVFSHTDTNRYGRQYSQRLKNLLDDAEAERAELRDEVVTVEHLILSLFHQ 119 Query: 119 -RGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKL 177 R + LK AG + + + R G+ E + QAL KY + + Sbjct: 120 QRNPITVFLKQAGIDKELVAAKLNKARQGKRAISPSQESRYQALSKYATNFNQWLADQTD 179 Query: 178 DPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRV 237 VIGR +EI I+VL R+ K+N +L+G PGVGK+ ++EG+ R++ +VPE L G+ V Sbjct: 180 RQVIGRKDEIDDIIRVLCRKEKSNAILLGFPGVGKSKVIEGVVGRLLADDVPEHLLGKEV 239 Query: 238 LALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGN 297 L++G L+AG KYRGEFEER K VL+++ +G +IL+I+++H +V AG+ +G++DAGN Sbjct: 240 FKLNLGGLIAGTKYRGEFEERFKAVLDEVLVAKGKIILYIEDIHQIVTAGRTEGSLDAGN 299 Query: 298 MLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERY 357 +LKP LA+G+++ +G TT YR+ E D ALE RFQ+V + EP + +AIL+GL+E Y Sbjct: 300 LLKPLLAQGQINIIGTTTFAAYRESFELDQALEGRFQRVRIEEPDQDKALAILQGLRENY 359 Query: 358 ELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDR 417 + H V++TD A+ AA +LS RY++DR LPDKA+DLIDEA + ++Q+ E + R Sbjct: 360 QDFHGVRLTDEALQAAISLSIRYLSDRYLPDKALDLIDEACAVKKIQLGQAQTERPDVSR 419 Query: 418 RIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKA 477 I +E+ +K +R +LN + ++R + + +A + +A Sbjct: 420 EDIASIVERITGIKVQGIMDNEREHLLNLDKLLRQR----IVGQDQAVQKVSEAILRSRA 475 Query: 478 ELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIA 537 ++ K R +G + GK L K L L G + ++R +++ Sbjct: 476 GIQNPK------RPIGSFLFLGPTGVGK-TALAKALAER--LFGNELEMVRLDMSEYMEK 526 Query: 538 EVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDA 579 +AR G P + E +L + + ++ +E A Sbjct: 527 HAVARLVGPPPGYVGFEEGGQLTEAVRRRLYSIVLLDEIEKA 568 >UniRef50_A0RNV1 ATP-dependent Clp protease ATP-binding subunit ClpA n=2 Tax=Campylobacter fetus RepID=A0RNV1_CAMFF Length = 732 Score = 414 bits (1064), Expect = e-114, Method: Composition-based stats. Identities = 215/850 (25%), Positives = 387/850 (45%), Gaps = 136/850 (16%) Query: 8 NKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGI-NAGQLRTDINQ 66 N ++ A LA+ +++I H++ AL L+S G+ + LR D+ Sbjct: 4 NNLAKSIKQANELAISKSHEYIGVEHILYALTFDTE--FLKTLSSLGVSDPVALRNDLVG 61 Query: 67 ALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLA-DI 125 +++ P++E + + L +L + + + +E F+ LE + + A + Sbjct: 62 LIDQFPRLE-SPKPPVLTYKLSEIL------SSIKEEEIFDAEDFLEEILEDKSSSAYQV 114 Query: 126 LKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDE 185 LK G D++ ++ +L + + K+DPVIGR+E Sbjct: 115 LKFHGLN-----------------------DEQDDTSQFVSNLNDMVKNSKIDPVIGREE 151 Query: 186 EIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGAL 245 EI++ +++L R KNNP+ +GE GVGKTAIV+G+ Q+I+NG+VP+ LK + LD+ +L Sbjct: 152 EIQKALEILCRHKKNNPIFVGEAGVGKTAIVQGIVQKIVNGKVPDRLKNSIIFNLDVSSL 211 Query: 246 VAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKA-DGAMDAGNMLKPALA 304 +AGAKYRGEFEERLK +++ L + + N I+FIDE+H+++ + + ++D N+LKP LA Sbjct: 212 IAGAKYRGEFEERLKSIISKLKENK-NHIIFIDEIHSIMSQNSSNENSLDVANILKPHLA 270 Query: 305 RGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQ 364 G++ C+GATT E+R KD AL RRF K+ V+EP+ ++ IL+GLK YE H+V Sbjct: 271 NGDIRCIGATTYSEFRN-FNKDKALLRRFNKIDVSEPNPDECFLILKGLKSTYEKFHNVT 329 Query: 365 ITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKL 424 +D + + L+ RY++D+ LPD AID+IDE + + + +K Sbjct: 330 YSDEILKLSIELAKRYLSDKFLPDSAIDIIDETGAKLSIANPNK---------------- 373 Query: 425 EQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKI 484 + DE +++E + E +E E+ ++ S +++ Sbjct: 374 -----LNLKDETVWSYAINVDDEFDNLEAIKNEAEKNNSKKRVLKSDILNTVSKMANISN 428 Query: 485 AIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWT 544 E + + L+ L+A + + L + + ++ + Sbjct: 429 LNENSDNT-----------KILKNLKANLKAKIFGQDSAIDALNDAL--------ISSYA 469 Query: 545 GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRS--RAGLADPNRPIGSFL 602 G+ +E K + + +G++E + ++N++ R +++ Sbjct: 470 GL-------NEPNKPIGIFLFTGSSGVGKSELANELANSLNVHFERYDMSEYMEKHSVSR 522 Query: 603 FLG-PTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGY 661 +G P G E L N + +++ D E ++ Sbjct: 523 LIGAPPGYIGFESGGLLTNMVKKHPYSVILFDEIEKANDEMIN----------------- 565 Query: 662 LTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLG 721 I L + A LTD G DF+NT++IMTSNLG Sbjct: 566 ------------IFLQIFDSAS---------------LTDNSGNKSDFKNTIIIMTSNLG 598 Query: 722 SDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKR 781 + + + + V F EF NRID+++ F+ L + + I + ++ Sbjct: 599 TKEPNTLGFNKN---LSDKTDKAVKGFFSSEFRNRIDKIIRFNDLSKDILEKIVEKEISN 655 Query: 782 LYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPG 841 L K + +I++S +AL + G+ YGAR LKR I+ I + +++++L G L G Sbjct: 656 LEKM--AKKIKINLSKKALNEIINQGFSDEYGARNLKRVIKDSINSSISKELLFGSLKRG 713 Query: 842 KVIRLEVNED 851 + +E + + Sbjct: 714 GEVYIEFDGE 723 >UniRef50_D1Y107 Negative regulator of genetic competence ClpC/MecB n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y107_9BACT Length = 774 Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats. Identities = 208/584 (35%), Positives = 301/584 (51%), Gaps = 29/584 (4%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 T + + + A AL + FI HLM L+ +E + L AG+ A + Sbjct: 1 MWQFFTERSKRVIQIAHREALRLGHAFIGTEHLMIGLIAEESSVAALALKEAGLAAEDVA 60 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGT 121 +I AL D+ S VLN LA++ +++ +E +L L + Sbjct: 61 REI-LALRPPAAPYAQPVDLPLSDRARGVLNAAIHLARELHSSYVGTEHLLLGVLSAPEC 119 Query: 122 LA-DILKAAGATTANIT------------QAIEQMRGGESVNDQGAEDQRQALKKYTIDL 168 A L G T N+ + + A+ + L KY +DL Sbjct: 120 TACHALAELGLDTENLRVSLKKQLLAQSSRQEAENDKENGDARPAADVKTPTLDKYCVDL 179 Query: 169 TERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEV 228 T +A +G+LDP+IGR++E+ R +Q+L RR KNNPVL+G+PGVGKTAIVEGLA +I G Sbjct: 180 TAKAAKGELDPLIGREQEMHRMMQILCRRRKNNPVLVGDPGVGKTAIVEGLAYKIQKGSA 239 Query: 229 PEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGK 288 P LKG+RV+ L MG LVAG KYRGEFE+R+K ++++L + NVILFIDELHT+VGAG Sbjct: 240 PSLLKGKRVVELTMGTLVAGTKYRGEFEDRMKKIVDELTAAK-NVILFIDELHTVVGAGS 298 Query: 289 ADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIA 348 A+G++DA N+LKP+LARGE +GATT DEY + IEKDAALERRFQ V V EP + +A Sbjct: 299 AEGSLDAANILKPSLARGEFQVIGATTRDEYTKNIEKDAALERRFQPVAVGEPDQDAALA 358 Query: 349 ILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSK 408 IL+GLKE YE HH V+ T+ A+ AA LS RY++DR LPDKAIDLIDEA + +R+ +D + Sbjct: 359 ILQGLKESYEKHHSVRYTEGALEAAVRLSSRYLSDRSLPDKAIDLIDEAGAKVRLDLDGR 418 Query: 409 PEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQY-SELEEEWKAEKA 467 + + + L + S K + + L E + L + +A A Sbjct: 419 QIP----EGLTVDEEEVAGVLSEWSGIPVKTLTEHEAQRLLRLESEIHQRLVGQDEAVSA 474 Query: 468 SLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLL 527 + ++ L+ + + +G + + E A L G LL Sbjct: 475 LCRAVRRSRSGLKDPRRPVGSFLFLGP---------SGVGKTELARCLARALFGSEKALL 525 Query: 528 RNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVI 571 +++ A+ G P + E +L + V+ Sbjct: 526 AFDMSEYMERHEAAKLIGAPPGYVGYDEEGRLTEAVRRHPWSVV 569 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 245/805 (30%), Positives = 388/805 (48%), Gaps = 85/805 (10%) Query: 83 PSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADI-LKAAGATTANITQAIE 141 ++ RV+ + + A + G FI +E ++ + ++A + LK AG ++ + I Sbjct: 5 FTERSKRVIQIAHREALRLGHAFIGTEHLMIGLIAEESSVAALALKEAGLAAEDVAREIL 64 Query: 142 QMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNN 201 +R + Q + + L++RA G L+ I E+ Sbjct: 65 ALRPPAAPYAQPVD----------LPLSDRAR-GVLNAAIHLARELH------SSYVGTE 107 Query: 202 PVLIGEPGVGKTAIVEGLAQR-IINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLK 260 +L+G + LA+ + + LK L+A + + ++ Sbjct: 108 HLLLGVLSAPECTACHALAELGLDTENLRVSLKK---------QLLAQSSRQEAENDKEN 158 Query: 261 GVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYR 320 G A + +D+ + A A G +D P + R E Sbjct: 159 GDARPAADVKTPT---LDKYCVDLTAKAAKGELD------PLIGR----------EQEMH 199 Query: 321 QYIEKDAALERRF--QKVFVAEPSVEDTIAILRGLKERYEL---------HHHVQITDPA 369 + ++ L RR V V +P V T AI+ GL + + V++T Sbjct: 200 RMMQ---ILCRRRKNNPVLVGDPGVGKT-AIVEGLAYKIQKGSAPSLLKGKRVVELTMGT 255 Query: 370 IVAAATLSHRY------IADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLK 423 +VA + I D K + L + ++ ++ + + Sbjct: 256 LVAGTKYRGEFEDRMKKIVDELTAAKNVILFIDELHTVVGAGSAEGSLDAANILKPSLAR 315 Query: 424 LEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAK 483 E Q + + + K ++ ER++ + + A+L+ Q +K E+ Sbjct: 316 GEFQVIGATTRDEYTKNIEKDAA----LERRFQPVAVGEPDQDAALAILQGLKESYEKHH 371 Query: 484 I------AIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRN-KVTDAEI 536 A+E A R+ K +L + A +L+ ++ V + E+ Sbjct: 372 SVRYTEGALEAAVRLSSRYLSDRSLPDKAIDLIDEAGAKVRLDLDGRQIPEGLTVDEEEV 431 Query: 537 AEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNR 596 A VL+ W+GIPV + E E ++LLR+E E+H R++GQ+EAV A+ A+RRSR+GL DP R Sbjct: 432 AGVLSEWSGIPVKTLTEHEAQRLLRLESEIHQRLVGQDEAVSALCRAVRRSRSGLKDPRR 491 Query: 597 PIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGY 656 P+GSFLFLGP+GVGKTEL + LA +F S++A++ DMSE+ME+H ++L+GAPPGYVGY Sbjct: 492 PVGSFLFLGPSGVGKTELARCLARALFGSEKALLAFDMSEYMERHEAAKLIGAPPGYVGY 551 Query: 657 EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 716 +E G LTEAVRR P+SV+L DE+EKA+PDVFN+LLQ+L++GRLTD GRTVDF+NTVVIM Sbjct: 552 DEEGRLTEAVRRHPWSVVLFDEIEKANPDVFNLLLQILEEGRLTDAHGRTVDFKNTVVIM 611 Query: 717 TSNLGSDLIQE------RFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQH 770 TSNLG + E + E VLG V FRPEF+NR+D +VFHPL + Sbjct: 612 TSNLGVRETAKAGLGFSASAEAEKKKQSEAVLGAVKEFFRPEFLNRVDAQLVFHPLSAEE 671 Query: 771 IASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLA 830 + + I + L RL E G + ++ +A + L GARPL+R IQ +IE+PL+ Sbjct: 672 MTRVFDIMMFDLRARLGEHGIILSMAKDAREFLLRAAAAQNQGARPLRRLIQTKIEDPLS 731 Query: 831 QQILSGELVPGKVIRLEVNEDRIVA 855 ILSGE+ G + ++ + + Sbjct: 732 DLILSGEVPDGSTVDCVLDGEALAF 756 >UniRef50_D2VM27 Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VM27_NAEGR Length = 828 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 199/722 (27%), Positives = 343/722 (47%), Gaps = 76/722 (10%) Query: 202 PVLIGEPGVGKTAIVEGLAQRIING--EVPE----------------------------- 230 P+ +GE GVG+ +I+E LA +I VPE Sbjct: 75 PLYVGENGVGRRSIIESLAYKITKNPENVPERLRNTKIIELSVDNLYGCNVTNNICTTFF 134 Query: 231 -GLKGRRVLA------------LDMGALVAG--------AKYRGEFEERLKGVLNDL--- 266 LK +V + + A + + E ++ + Sbjct: 135 NALKSLKVYDAFNYDLPPNPKLMSIEEKKAHLYGNNPPPTAHDEDVERLFNEMVESVQLY 194 Query: 267 ----AKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQY 322 K ILFI + + MV ++L+P L + L V T EY + Sbjct: 195 RENREKTNQPKILFIHQFYNMVDDYSYSFYDSVSSVLQPLLEKKRLKLVTCMTPSEYAK- 253 Query: 323 IEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIA 382 K+ L F+ + V EP+ T+ I+ KE E H V I + + A LS+RYI Sbjct: 254 FTKNP-LASHFEVIKVGEPNFATTLDIVTKKKEYLEASHGVFIDNDIVEEALLLSNRYIP 312 Query: 383 DRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLD 442 + P K I ++DE AS + + S P + L+ K+++ ++ + Sbjct: 313 LKANPMKCISVLDELASIVEKRGCSIPINVLELED-----KIKKVSIDIDKKSDDDIDTS 367 Query: 443 MLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQ------ARRVGDLA 496 L ++L + Y+ WKAE +L + + L K + + Sbjct: 368 SLMKKLEKLKESYATKYSAWKAEYQALQSYRENRVRLIGLKKELGDCIASITSPDCESAK 427 Query: 497 RMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRM--MES 554 R S++ IPE++ L+ + + + + N+ T +++ V++R +GIP + Sbjct: 428 RASKIIEDDIPEVKASLK-IFEKQSAKNKYVNNRATLDDLSVVISRMSGIPQKDLYFTTQ 486 Query: 555 EREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTEL 614 + L ME L +VIGQ +A+ ++S IR ++ GL D N+P S LF G +GVGKTEL Sbjct: 487 KNHSLNNMESILEEQVIGQKQAISSISKTIRVAKLGLRDANKPQASLLFCGFSGVGKTEL 546 Query: 615 CKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVI 674 K +A ++ ++ ++ IDM+++ + SVS L+G GYVGY++GG LT +++ P+ VI Sbjct: 547 AKQIAKVVYGNENSVSVIDMTKYNTEFSVSGLIGTSAGYVGYDDGGELTNTIKKNPFQVI 606 Query: 675 LLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDY 734 + DE+EKAH V+NILL V ++G + G +V ++T++I+TSN+G+ + + E Sbjct: 607 IFDEIEKAHSRVWNILLPVFEEGVCQNNYGESVSLKDTIIILTSNVGTKRLFQHKEEDKD 666 Query: 735 AHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRL-EERGYEI 793 +E+ + F PEF+NR+D++V+F+ L + I IQL++L +RL ++R +I Sbjct: 667 LTQQEIFHEEIKETFAPEFLNRLDDIVIFNELSMHDLDKILSIQLRKLEERLSKKREIKI 726 Query: 794 HISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRI 853 +S EA + L N +D GARP+KR IQ + P++ G+L ++++V+E ++ Sbjct: 727 ELSTEARQFLIFNSFDIQLGARPIKRNIQNYLSAPISDLFYQGKLDKHCTLKVDVDEKKL 786 Query: 854 VA 855 Sbjct: 787 KV 788 >UniRef50_B3EPU4 ATPase AAA-2 domain protein n=4 Tax=Chlorobiaceae RepID=B3EPU4_CHLPB Length = 440 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 204/437 (46%), Positives = 306/437 (70%), Gaps = 11/437 (2%) Query: 432 ESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARR 491 + +++RL+ + ++L+D + ++ W AEK + ++++K++LE + E+ R Sbjct: 1 MNSSDTRQRLEDIEKQLADLNEEQRRIQARWDAEKGLVQESRSLKSKLEDLRHQAEEYER 60 Query: 492 VGDLARMSELQYGKIPELEKQLEAATQLEGKTMR----LLRNKVTDAEIAEVLARWTGIP 547 GD +++E++Y I ++EKQ+E + +++ ++ +IA+++++WTGIP Sbjct: 61 SGDYGKVAEIRYSSIADIEKQIEENKLKIEEKQASGELIMKEEIDAGDIADIVSKWTGIP 120 Query: 548 VSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPT 607 VS+M++SER+KLL ++QELH RVIGQ++AV AVS A++RSRAG+ D RPIGSF+FLGPT Sbjct: 121 VSKMLQSERQKLLLIDQELHKRVIGQDKAVQAVSEAVKRSRAGMGDEKRPIGSFIFLGPT 180 Query: 608 GVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVR 667 GVGKTEL + LA ++FD ++AM+RIDMSE+ME HSVSRLVGAPPGY+GYEEGG LTEAVR Sbjct: 181 GVGKTELARTLAEYLFDDEDAMIRIDMSEYMESHSVSRLVGAPPGYIGYEEGGQLTEAVR 240 Query: 668 RRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE 727 RRP+SV+LLDE+EKAHPDVFNILLQ+LDDGRLTD +G TV+F+NT++IMTSN+G+ LIQ Sbjct: 241 RRPFSVVLLDEIEKAHPDVFNILLQILDDGRLTDSKGHTVNFKNTIIIMTSNIGAQLIQS 300 Query: 728 RFGELD-------YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLK 780 ++D +++ + ++ +PEF+NRIDEV++F PL + + I IQ Sbjct: 301 EMEKMDGENRDAVLETLQDKLFLLLKQQVKPEFLNRIDEVILFTPLTRKDLEKIVTIQFN 360 Query: 781 RLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVP 840 + K + +H+ D AL LS G+DP +GARPLKR +Q+ I N L++ IL G + Sbjct: 361 SINKLALRQNISLHLDDSALTWLSNAGFDPAFGARPLKRVMQRSITNKLSEMILEGTVRE 420 Query: 841 GKVIRLEVNEDRIVAVQ 857 G +++ V + V+ Sbjct: 421 GDSVQVTVEHGELSLVK 437 >UniRef50_UPI000194EB59 PREDICTED: hypothetical protein, partial n=1 Tax=Taeniopygia guttata RepID=UPI000194EB59 Length = 480 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 230/480 (47%), Positives = 330/480 (68%), Gaps = 15/480 (3%) Query: 387 PDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNE 446 PDKAID++DE S +RM++ S R++RRI Q ++E++A+ E +++ + Sbjct: 2 PDKAIDIVDELRSKLRMRLISAAG-SRRINRRIAQKEIEREAIK---REGDTEKVKEIER 57 Query: 447 ELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKI 506 +L+ + E +WKAEK + Q K ++EQ ++A R GD A+++E++Y K+ Sbjct: 58 DLAAMREEEKEYTAKWKAEKDLIDRIQQNKIDIEQLNFEADRAEREGDYAKVAEIRYSKV 117 Query: 507 PELEKQ---LEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRME 563 EK+ ++ ++ L++ +V +IA+V++RWTGIPV++M++SE+EKLL +E Sbjct: 118 QAKEKENAEIQEQLKIMQGEKALIKEEVDAEDIADVVSRWTGIPVNKMVQSEKEKLLHLE 177 Query: 564 QELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMF 623 ELH RV+GQ +A+ A+++A+RRSRAGL DP RPIGSF+FLG TGVGKTEL KALA ++F Sbjct: 178 AELHQRVVGQEDAIRAIADAVRRSRAGLNDPRRPIGSFIFLGTTGVGKTELAKALAEYLF 237 Query: 624 DSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAH 683 D + M RIDMSE+ EKHSVSRLVGAPPGYVGYEEGG LTE+VRR+PY V+L DE+EKAH Sbjct: 238 DDENMMTRIDMSEYQEKHSVSRLVGAPPGYVGYEEGGQLTESVRRKPYQVVLFDEIEKAH 297 Query: 684 PDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYA-------H 736 PD FNILLQVLDDGRLTD +GR V+F+NT++IMTSN+GS LI+E F +L Sbjct: 298 PDTFNILLQVLDDGRLTDNKGRNVNFKNTIIIMTSNMGSQLIRENFSKLTPQNKPKVVEE 357 Query: 737 MKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRL-EERGYEIHI 795 K VL ++ N RPEF+NRIDE+++F PL I I +QL + + L + G E+ I Sbjct: 358 TKAQVLEMLKENIRPEFLNRIDEIIMFTPLNRTEIEEIVGLQLHSIQRMLQKSSGIELKI 417 Query: 796 SDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855 + +AL L++ GYDP +GARP+KRAI + + N L++ IL+ ++ I ++V D +V Sbjct: 418 TPKALSYLADEGYDPEFGARPVKRAIHRLVLNQLSKDILAQKVDRSHPITIDVENDDLVF 477 >UniRef50_B3QUJ2 ATPase AAA-2 domain protein n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QUJ2_CHLT3 Length = 443 Score = 404 bits (1037), Expect = e-110, Method: Composition-based stats. Identities = 209/439 (47%), Positives = 311/439 (70%), Gaps = 11/439 (2%) Query: 430 MKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQA 489 + + RL ++++L++ + ++ +W+++K + + +K+++E+AK+ E+ Sbjct: 4 KDTLHQDIETRLAEIDQQLANLREEQERIQAKWQSQKELIMSIRKLKSDIEEAKVQAEEF 63 Query: 490 RRVGDLARMSELQYGKIPELEKQLEA----ATQLEGKTMRLLRNKVTDAEIAEVLARWTG 545 R G+ +++EL+YGKI +LEK+LE L L++ + +IA+V+++WTG Sbjct: 64 ERQGNYGKVAELRYGKITQLEKELEQGKKKVEALRASGNMLMKEDIESKDIADVVSKWTG 123 Query: 546 IPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLG 605 IPVS+M++SER+K+L +E EL RVIGQ EA+ AVS A++R+RAGL+D RPIGSF+FLG Sbjct: 124 IPVSKMLQSERQKILNIEDELRKRVIGQREAIHAVSEAVKRARAGLSDEKRPIGSFIFLG 183 Query: 606 PTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEA 665 TGVGKTEL ++LA ++F+ ++AMVRIDMSE+ME +VSRLVGAPPGYVGYEEGG LTEA Sbjct: 184 TTGVGKTELARSLAAYLFNDEDAMVRIDMSEYMEAFNVSRLVGAPPGYVGYEEGGQLTEA 243 Query: 666 VRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLI 725 VRR+P+SV+LLDE+EKAHPDVFNILLQVLDDGRLTD +G TV+FRNT++IMTSNLGS LI Sbjct: 244 VRRKPFSVVLLDEIEKAHPDVFNILLQVLDDGRLTDNKGHTVNFRNTIIIMTSNLGSHLI 303 Query: 726 QERFGELDY-------AHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQ 778 QE +L ++ + ++ + RPEF+NR+DE ++F PL + + I IQ Sbjct: 304 QEEMAKLTDENKETILPELRAKLFDLMRKSLRPEFLNRVDETILFTPLTREDLKQIVDIQ 363 Query: 779 LKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGEL 838 +R+ + +++ + I+DEA L + GYDP +GARPLKR +Q+ I N LA++IL GE+ Sbjct: 364 FERIRQTAQKQNILLRITDEAKNWLGQLGYDPHFGARPLKRVMQRYITNELAEKILGGEV 423 Query: 839 VPGKVIRLEVNEDRIVAVQ 857 G I + + +++V + Sbjct: 424 SDGDSIEIVLENNQLVFRK 442 >UniRef50_A7AW26 Chaperone clpB, putative n=1 Tax=Babesia bovis RepID=A7AW26_BABBO Length = 833 Score = 402 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 214/844 (25%), Positives = 370/844 (43%), Gaps = 81/844 (9%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 L+ + L A LA + IE ++ +LL S L + ++ G + T+++ Sbjct: 32 LSTEVSAVLNHASELAKRSGSGSIESEFIVKSLL-DSCSSYRKWLRTIRLSPGPIATELD 90 Query: 66 QALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADI 125 + R G + + + LA R + A L+ L I Sbjct: 91 DFIKRRRYTNGEE---RVGRSSQSAILYAQSLALSRSKP-VGILELSEALLKYDDFLRGI 146 Query: 126 LKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDE 185 + + A + Q A+++ +LTE A+ G + +GR+ Sbjct: 147 HQRSDAGKPKVDQ--------------------NAVEECLYNLTEAAKNGSGNVFVGREN 186 Query: 186 EIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGAL 245 E+ R L R KNN +LIGEPGVGKTA+VE LA ++ + V +LD+ L Sbjct: 187 ELERLKGSLNRMRKNNVLLIGEPGVGKTALVERLAVDMLLEDP-----NITVYSLDLCRL 241 Query: 246 VAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALAR 305 +G RGE E +LK + + + G ILFIDE+H ++ + ++ N+LKP + Sbjct: 242 YSGQGTRGELEAKLKSIFDTVK--NGKSILFIDEIHHLIQ--NQENGVNVTNLLKPIMTS 297 Query: 306 GELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQI 365 + +G+TT EY QY +D A ERRF+ + + E S ++T+AIL G + E +H V+I Sbjct: 298 TLVKIIGSTTAKEYHQYFRRDRAFERRFEILRLHENSADETLAILHGSRPSLEDYHGVKI 357 Query: 366 TDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKL- 424 TD A+VA+ LS R+I +R LPDKAIDL+DEAA + + + + L + + Sbjct: 358 TDDALVASVELSTRFIPNRYLPDKAIDLLDEAAMLSKRKRSCSNDLFELLRHKTGIISAL 417 Query: 425 -------EQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKA 477 +Q + E+ + R L+ +L D ++Q + E+ + Sbjct: 418 LRGKSGNDQLNRVLSEIESMESRYKSLHGKLRDVQQQ-QQNHEKNGNLTKASELKNHKIP 476 Query: 478 ELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIA 537 E+ + + ++ ++ + + + ++ V +IA Sbjct: 477 EIIRLIVQLQSDIKMVINKTIEDSKDMLPVDMLNDGNTGVSPASDPDVFSGVYVDRIDIA 536 Query: 538 EVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRP 597 L++ TGIPVS ++ S+ + Q+L + V+GQNEAV I + +A + Sbjct: 537 SALSQSTGIPVSVVLRSQMGHYEQAVQQLSNIVLGQNEAVYKTLLHIYMYSSSIASGRKI 596 Query: 598 IGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYE 657 + ++GP GVGK L ++ MF A+ I S + ++ + LVG+PPGY+G+ Sbjct: 597 GAALYYVGPPGVGKRLLLNHVSR-MFGM--ALKYICGSNLVSSNATNILVGSPPGYIGHR 653 Query: 658 EGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMT 717 EGG L E ++ PY ++ ++ H +V N+L+ +D+G L D QG + R + Sbjct: 654 EGGMLCEWIKDHPYGIVAFEDAHLLHVNVVNLLIGAIDNGFLVDNQGDQCNLRQCFFVFV 713 Query: 718 SNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQI 777 SN L D+V+ F PL ++ + I Sbjct: 714 SNDHEQLSPLIKQNA-------------------------DDVISFEPLSKESVERIICK 748 Query: 778 QLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGE 837 +L + ++ S AL+ L Y G + + I + + + +A ++SG Sbjct: 749 ELASIDV------VKLRASKAALEHL----YHLAIGTKSIPNLIYRTLGSSIANLVVSGR 798 Query: 838 LVPG 841 + G Sbjct: 799 VPIG 802 >UniRef50_Q7RAR9 ATP-dependent Clp protease, ATPase subunit-related n=2 Tax=Plasmodium (Vinckeia) RepID=Q7RAR9_PLAYO Length = 1122 Score = 396 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 212/929 (22%), Positives = 381/929 (41%), Gaps = 174/929 (18%) Query: 5 RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLN----QEGGSVSPLLTSAGINAGQL 60 + + +L L +A A + F+ ++ +++N + L I+ L Sbjct: 282 KFSENCKLVLQNAILEAKKKNKIFVNLTDILISIINIAQENKECDFVKYLNELNISLSDL 341 Query: 61 RTDINQA--------LNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFV 112 + + L P + + + + N DK + D Sbjct: 342 KKQVTNYDENNLNSNLIHCPINKNPIKNDEEQDGNKNLNNYSDKQNKNMTDQ-------- 393 Query: 113 LAALESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERA 172 + + + + + K +D+ ++A Sbjct: 394 ----------PNNIINNMNNEYINQEKYFKNNEDNNFTQNNKFMSSIITKDCLVDMVQQA 443 Query: 173 EQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGL 232 + KL+ GR +EI+R I++L R+ K+NP+L+GE GVGKTAIVE LA I+ +VP L Sbjct: 444 YEKKLENFFGRKDEIKRIIEILGRKKKSNPLLVGETGVGKTAIVEQLAYLILKNKVPYHL 503 Query: 233 KGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGA 292 K ++ +++G +VAG KYRGEFEE++K +L +++K + N ILFIDE+H +VGAG +G+ Sbjct: 504 KNCKIFQMNLGNIVAGTKYRGEFEEKMKQILANISKDKKN-ILFIDEIHVIVGAGSGEGS 562 Query: 293 MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRG 352 +DA N+LKP L+ L C+G TT EY +YIE D AL RRF V + + +T +L+ Sbjct: 563 LDASNILKPFLSSDNLQCIGTTTFQEYSKYIETDKALRRRFNCVNIKPLNSNETYKLLKK 622 Query: 353 LKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDS----- 407 +K YE +H++ TD A+ + LS Y+ PDKAID++DEA S +++ + Sbjct: 623 IKNSYEQYHNIYYTDEALKSIILLSDDYLPTLNFPDKAIDILDEAGSYQKIKYERYITKK 682 Query: 408 -KPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEK 466 + E + D + + S + + + + S++ E ++K Sbjct: 683 LRNENNIKTDSIKVSTNTNSNKIDNNSTNVTSQIESNYLVDDLHMKYVTSDVIENIVSKK 742 Query: 467 ASLSGTQTIKAELEQAKIAIEQARRVGD-LARMSELQYGKIPELEKQLEAATQLEGKTMR 525 +S+S + K E E+ + E+ ++ ++ ++ + + ++ A + G + Sbjct: 743 SSISFIKKNKKEEEKIQNLKEKLNKIIIGQEKVIDILAKYLFKAITNIKDANKPIGTLLL 802 Query: 526 LLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIR 585 + V A+V++++ + + ++ M + + Sbjct: 803 CGSSGVGKTLSAQVISQY-------LFNDDNIIVINMSEYIDKH---------------- 839 Query: 586 RSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSR 645 S LF G + L + +++ D E Sbjct: 840 ------------SVSKLFGSYPGYVGYKEGGELTEAVKKKPFSIILFDEIE--------- 878 Query: 646 LVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGR 705 KAH DV ++LLQ+LD+G LTD +G Sbjct: 879 -----------------------------------KAHSDVLHVLLQILDNGLLTDSKGN 903 Query: 706 TVDFRNTVVIMTSNLGSDLIQERFG----------------------------------- 730 V F+NT + MT+N+GSD+I + F Sbjct: 904 KVSFKNTFIFMTTNVGSDIITDYFKVYNKNYANFGFKYYTQKEKIEKPDLQNSTNNNTQN 963 Query: 731 ------------------ELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIA 772 Y +K + + F PEF+NRIDE ++F ++ I Sbjct: 964 DKDKIQTDLDIFEEKIKTNKWYDELKPEIEEELKKKFLPEFLNRIDEKILFRQFLKRDII 1023 Query: 773 SIAQIQLKRL-YKRLEERGYEIHISDEALKLLS---ENGYDPVYGARPLKRAIQQQIENP 828 I + ++ L + + + I I D +K + N YD +GAR ++RA+ + IE+P Sbjct: 1024 QILENMIQDLKKRIKKRKKLNILIDDNIIKYICSDENNIYDINFGARSIRRALYKYIEDP 1083 Query: 829 LAQQILSGELVPGKVIRLEVNEDRIVAVQ 857 +A ++S E P + L + + + V+ Sbjct: 1084 IAAFLISNEYNPNDTMHLTLLPNNKIHVE 1112 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 26/225 (11%), Positives = 70/225 (31%), Gaps = 10/225 (4%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 D AL A+ +A ++ + HL+ A++ + + + I+ Sbjct: 53 FDEYDENCIKALIMAREVAKNNNENEVLLKHLLVAIIKTDSHIIDHIFKYFNISLQHFIN 112 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTL 122 N + + + TG + + + K + K D + ++ Sbjct: 113 KFNTEIAKN-SFKKTGQEPYDNNHIPPEQIEFQKCSTKNNDQEKTLINNIIGNKIKDEEY 171 Query: 123 ADILKA--------AGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQ 174 I+ T A+ + E + + + + + + + E Sbjct: 172 NHIVTNNLDKEATKNNDTEASKNNSTESTKDNSTEATNNENCESEHVTDVSSSYNKMQEN 231 Query: 175 GKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGL 219 G + +++ ++ + + + P L+ + GK + L Sbjct: 232 GIDTKLAAHEKDEKQNDEKQNEKQNDEPFLVND-NSGKRNNQKEL 275 >UniRef50_A7HJU2 ATPase AAA-2 domain protein n=4 Tax=Thermotogaceae RepID=A7HJU2_FERNB Length = 741 Score = 393 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 213/601 (35%), Positives = 323/601 (53%), Gaps = 29/601 (4%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 ++ T Q L + + + P H++ +L + +LT ++ L Sbjct: 3 FNMEDFTENAQEILQSVNDVLNRYRQNQLAPEHILLTMLENTKTAAVDILTFLNVDTDAL 62 Query: 61 RTDINQALNRLPQVEGT----GGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAA- 115 R D+ + ++ + + + D +V+N + A++ GD + ++ +LA Sbjct: 63 RRDVERIISSKGGYYYSGSGGTNQIYITPDTTKVINEAKREAKRMGDEKVGTDHLLLAMA 122 Query: 116 LESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQG 175 + T +L G T + AI+Q+R + E+ L K+T +LTE A+ G Sbjct: 123 IVPETTTYRLLSKYGVTQDALYSAIKQLRMQRTY---SEEENIDILAKFTENLTEMAKNG 179 Query: 176 KLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGR 235 +L PV+GR+ EI R I++L R+ KNNPVLIG+PGVGKTAIVEGLAQRI+N +VPE LK + Sbjct: 180 QLMPVVGRENEINRMIEILGRKIKNNPVLIGDPGVGKTAIVEGLAQRIVNKDVPEFLKNK 239 Query: 236 RVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDA 295 +L LD+ LVAG K+RGEFEERLK +++ + K+ +VILFIDELHT+VGAG A+GA+DA Sbjct: 240 TILKLDLARLVAGTKFRGEFEERLKKLID-VLKKRTDVILFIDELHTVVGAGAAEGALDA 298 Query: 296 GNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKE 355 GN+LKP LARG L +GATT++EYR++IEKD AL RRFQ +FV EPS+E+TI IL+GLK Sbjct: 299 GNILKPELARGTLRVIGATTVEEYRKHIEKDKALARRFQVIFVPEPSIEETIEILKGLKA 358 Query: 356 RYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRL 415 ++E H+V I+D AI AA +S RYI DR LPDKA+DL+DEAA+ ++ + E D Sbjct: 359 KFEEFHNVSISDKAIEFAAKMSARYITDRFLPDKAVDLVDEAAARAKIDGKKEIVEEDIA 418 Query: 416 DRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTI 475 + +M + E K +++E+ D+E + K +A + + Sbjct: 419 SVIERWTGIPVGKIMGDEKEKIKNLEKIIHEKFVDQEEAVKIVSNAIKMSRAGIRNPKR- 477 Query: 476 KAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAE 535 +G + GK EL K+L A L G L+R +++ Sbjct: 478 ---------------PLGVFLFLGPTGVGK-TELAKRL--ADVLFGSEKALIRIDMSEYM 519 Query: 536 IAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPN 595 +AR G P + E +L + + V+ +E ++ + L D Sbjct: 520 EKHSVARLIGAPPGYVGYEEGGQLTEQVRRRPYSVVLFDE-IEKAHPEVFNVLLQLFDDG 578 Query: 596 R 596 R Sbjct: 579 R 579 Score = 370 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 177/401 (44%), Positives = 260/401 (64%), Gaps = 2/401 (0%) Query: 453 RQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQ 512 R++ + + + ++ + +KA+ E+ + + A+MS +K Sbjct: 334 RRFQVIFVPEPSIEETIEILKGLKAKFEEFHNVSISDKAIEFAAKMSARYITDRFLPDKA 393 Query: 513 LEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIG 572 ++ + + + ++ + +IA V+ RWTGIPV ++M E+EK+ +E+ +H + + Sbjct: 394 VDLVDEAAARAKIDGKKEIVEEDIASVIERWTGIPVGKIMGDEKEKIKNLEKIIHEKFVD 453 Query: 573 QNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRI 632 Q EAV VSNAI+ SRAG+ +P RP+G FLFLGPTGVGKTEL K LA+ +F S++A++RI Sbjct: 454 QEEAVKIVSNAIKMSRAGIRNPKRPLGVFLFLGPTGVGKTELAKRLADVLFGSEKALIRI 513 Query: 633 DMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQ 692 DMSE+MEKHSV+RL+GAPPGYVGYEEGG LTE VRRRPYSV+L DE+EKAHP+VFN+LLQ Sbjct: 514 DMSEYMEKHSVARLIGAPPGYVGYEEGGQLTEQVRRRPYSVVLFDEIEKAHPEVFNVLLQ 573 Query: 693 VLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPE 752 + DDGRLTDG+G TVDFRNT++IMTSN+GSD+I + E + + + FRPE Sbjct: 574 LFDDGRLTDGKGTTVDFRNTIIIMTSNIGSDVIMQDIEEGFEDLIPRHIEEEMRKYFRPE 633 Query: 753 FINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRL--EERGYEIHISDEALKLLSENGYDP 810 INRID VVF PL ++HI I +I K L +RL ++ ++ + + + L+ GY P Sbjct: 634 LINRIDAAVVFKPLKKEHIKEIIEIYTKELNERLIDSDKDIKVVLDESMREYLATEGYVP 693 Query: 811 VYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNED 851 GARPL+R + +E LA+ I+ ++ G+ ++ E Sbjct: 694 SMGARPLRRLFENTVEFKLAELIIDEKVKEGQTVKFIWEEG 734 >UniRef50_A6Q1Y5 ATP-dependent Clp protease, ATP-binding subunit ClpA n=3 Tax=Epsilonproteobacteria RepID=A6Q1Y5_NITSB Length = 729 Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats. Identities = 196/578 (33%), Positives = 292/578 (50%), Gaps = 27/578 (4%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 ++N+ +A A H ++++ H+ ALLN G + +L AG + ++ + Sbjct: 2 ISNQLNSIFKEAVKYAKRHRHEYLTVEHVFLALLNSPEG--AKILKEAGADIEIMKRKLI 59 Query: 66 QALNRL--PQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLA 123 Q L + P E + + L RV+ + Q + ++A + + + Sbjct: 60 QHLESVLKPLPENVVREPFETVALSRVIENMIRHIQNAEKKEATVGDLLVALFDEEHSYS 119 Query: 124 -DILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIG 182 +LK G + +I + + D+ L K+TIDL + A++GK+DPVIG Sbjct: 120 VYLLKEQGISKLDIMEIVSHQAEVVESKPSKKTDEESYLAKFTIDLLKEAKEGKIDPVIG 179 Query: 183 RDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDM 242 RD+EI R +Q+L RR KNNP+L+GEPGVGKTAI EGLA +I GE+P+ L+G + +LDM Sbjct: 180 RDKEIERVMQILCRRKKNNPLLVGEPGVGKTAIAEGLALKIAAGEIPDVLEGASLYSLDM 239 Query: 243 GALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGA-MDAGNMLKP 301 GAL+AG KYRG+FE+RLKGV+ +L K N ILFIDE+HT+VGAG G MDA NMLKP Sbjct: 240 GALLAGTKYRGDFEKRLKGVVEEL-KSIPNAILFIDEIHTIVGAGATQGGSMDASNMLKP 298 Query: 302 ALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHH 361 ALA G + C+GATT E+R ++EKD AL RRF KV V EP +E T IL+GLK++YE HH Sbjct: 299 ALASGAIKCIGATTYAEFRNFLEKDRALSRRFAKVDVKEPDLETTFKILKGLKDKYEKHH 358 Query: 362 HVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQ 421 V+ A+ +A LS +YI DRQLPDKAIDLIDE +S ++ + Sbjct: 359 KVRYHINALRSAVELSDKYINDRQLPDKAIDLIDEVGASFHLRKKRRSVVTVND------ 412 Query: 422 LKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQ 481 +E + D L + +E+ + + +A + + +A L Sbjct: 413 --IEDTIAKMVGLPPQRVTSDDLEILKNLEEKLKERVLGQEEAVEQLAMAIKRSRAGLNP 470 Query: 482 AKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLA 541 I VG + K A + R +++ ++ Sbjct: 471 PNKPIGSFLFVGPTG------------VGKTELAKELARTMGVHFERFDMSEYMEKHAVS 518 Query: 542 RWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDA 579 R G P + E L ++ + V+ +E A Sbjct: 519 RLIGAPPGYIGYEEGGLLTETIRKHPYTVLLLDEIEKA 556 Score = 362 bits (929), Expect = 3e-98, Method: Composition-based stats. Identities = 215/798 (26%), Positives = 343/798 (42%), Gaps = 98/798 (12%) Query: 83 PSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAGATTANITQAIEQ 142 S L + K A++ +++ E LA L S A ILK AGA + + + Q Sbjct: 2 ISNQLNSIFKEAVKYAKRHRHEYLTVEHVFLALLNSPE-GAKILKEAGADIEIMKRKLIQ 60 Query: 143 MRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNP 202 + + I I+ +Q K Sbjct: 61 HLESVLKPLPENVVREPFE------------------TVALSRVIENMIRHIQNAEK--- 99 Query: 203 VLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGV 262 K A V L + + E V L E+ + + Sbjct: 100 ---------KEATVGDLLVALFDEE-----HSYSVYLLK--------------EQGISKL 131 Query: 263 -LNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQ 321 + ++ + V+ T + A +D +LK A +G E + Sbjct: 132 DIMEIVSHQAEVVESKPSKKTDEESYLAKFTID---LLKEAKEGKIDPVIG--RDKEIER 186 Query: 322 YIEKDAALERRF--QKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSH- 378 ++ L RR + V EP V T AI GL + + + A + + + Sbjct: 187 VMQ---ILCRRKKNNPLLVGEPGVGKT-AIAEGLALKIAAGEIPDVLEGASLYSLDMGAL 242 Query: 379 ---------------------RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDR 417 + I + L I I A ++ +D+ L Sbjct: 243 LAGTKYRGDFEKRLKGVVEELKSIPNAILFIDEIHTIVGAGATQGGSMDASNMLKPALAS 302 Query: 418 RIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKA 477 I+ + + L ++ KE + K K ++ Sbjct: 303 GAIKCIGATTYAEFRNFLEKDRALSRRFAKVDVKEPDLETTFKILKGLKDKYEKHHKVRY 362 Query: 478 ELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIA 537 + + A+E + + + ++ + I E+ + R+ VT +I Sbjct: 363 HINALRSAVELSDKYINDRQLPDKAIDLIDEVGASFHLRKKR--------RSVVTVNDIE 414 Query: 538 EVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRP 597 + +A+ G+P R+ + E L +E++L RV+GQ EAV+ ++ AI+RSRAGL PN+P Sbjct: 415 DTIAKMVGLPPQRVTSDDLEILKNLEEKLKERVLGQEEAVEQLAMAIKRSRAGLNPPNKP 474 Query: 598 IGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYE 657 IGSFLF+GPTGVGKTEL K LA M R DMSE+MEKH+VSRL+GAPPGY+GYE Sbjct: 475 IGSFLFVGPTGVGKTELAKELARTM---GVHFERFDMSEYMEKHAVSRLIGAPPGYIGYE 531 Query: 658 EGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMT 717 EGG LTE +R+ PY+V+LLDE+EKAHPD+ NILLQV+D+ LTD G DF++ V+IMT Sbjct: 532 EGGLLTETIRKHPYTVLLLDEIEKAHPDLINILLQVMDNATLTDNNGNVADFKHVVLIMT 591 Query: 718 SNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQI 777 SN+G+ + + + + F PEF NR+D +V F PL ++ + I Sbjct: 592 SNVGATEANVMGFKQESVSKFDE---ALKQYFTPEFRNRLDAIVRFRPLSQEIVEGIVDK 648 Query: 778 QLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGE 837 + L +L+ + + ++ +A K L++ GY P GARPL R I ++I+ PL +IL G+ Sbjct: 649 FIAELNDQLDNKSITLSLTPKAKKYLAQKGYSPELGARPLARVISEEIKTPLTNEILFGK 708 Query: 838 LVPGKVIRLEVNEDRIVA 855 L G ++++ + ++ Sbjct: 709 LRHGGKVKIDEKKGKLAF 726 >UniRef50_Q7XL03 OJ000315_02.14 protein n=2 Tax=Oryza sativa Japonica Group RepID=Q7XL03_ORYSJ Length = 877 Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 236/913 (25%), Positives = 368/913 (40%), Gaps = 190/913 (20%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +R T + A+ +Q A G ++ + P HL+ L+ ++ + ++G+ + R Sbjct: 71 FERFTERAVKAVVFSQREARGMGDETVAPHHLLLGLVAEDRSPLG--FLASGVRVERARE 128 Query: 63 DINQALNRLPQVEGTGG---DVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALE-S 118 A+ + + G DV S RV + ++ G NFIS E L + Sbjct: 129 ACRAAVGKEGLAQAPVGLATDVPFSGASKRVFEAAVEFSRNMGCNFISPEHIALGLFNLN 188 Query: 119 RGTLADILKAAGATTANITQAIEQMRGGE----------------------------SVN 150 T ++LK+ G ++ + + GE V Sbjct: 189 DPTTNNVLKSLGVDSSQLAKQALTRVQGELAKDGREPVGLSSFKVREKFTPGGGKSAIVK 248 Query: 151 DQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGV 210 ++ AL + +DLT RA G +DPVIGR +EI R +Q++ RRTKNNP+L+GE GV Sbjct: 249 YSNKNKEKSALALFCLDLTMRASGGLIDPVIGRKDEIERVVQIICRRTKNNPILLGEAGV 308 Query: 211 GKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQE 270 GKTAI EGLA +I Sbjct: 309 GKTAIAEGLAHKI---------------------------------------------AN 323 Query: 271 GNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALE 330 G+V +F+ GK ++D ++ A RGEL + + E R+ K L Sbjct: 324 GDVPIFL--------VGKRILSLDVALLMAGAKERGELEARVTSLIREVRKADPKLPFLV 375 Query: 331 RRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKA 390 Q+ ++ + D L Sbjct: 376 FNLQR------------------APKFHAGDVILFIDEV--------------HTLIGSG 403 Query: 391 IDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSD 450 I + + + KP + I L++ L + D+A +R + Sbjct: 404 IAGRGSKGAGLDIANLLKPALARGELQCIASTTLDEHRLHFDKDKALARRFQPVLVNEPS 463 Query: 451 KERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELE 510 +E L + K LE A+ + R + + I E Sbjct: 464 QEDAVKILLGLREK----YETYHKCKYTLESINAAVYLSARYIADRHLPDKAIDLIDEAG 519 Query: 511 KQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRV 570 + + K + + + P E + + + Sbjct: 520 SRARMESFKRKKEEQC--------------SILSKSPDEYWQEIRAVQNMHEVALTNK-- 563 Query: 571 IGQNEAVDAVSNAIRRSRAGLADPNRPIGS-FLFLGPTGVGKTELCKALANFMFDSDEAM 629 + L ++ +G KT L+ D A Sbjct: 564 ----------------VKYSLNQNDQEDAVDIELVG---EDKTSPASMLSTS-TDKKSAT 603 Query: 630 VRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNI 689 VR+DMSE+ME+H+VS+L+G+PPGY+G+ EGG LTEAVRR+P++V+LLDE+EKAHPD+FNI Sbjct: 604 VRLDMSEYMERHAVSKLIGSPPGYMGFGEGGTLTEAVRRKPFTVVLLDEIEKAHPDIFNI 663 Query: 690 LLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQER-----------FGELDYAHMK 738 LLQ+ +DG LTD QGR V F+NT+++MTSN+GS I E YA MK Sbjct: 664 LLQIFEDGHLTDSQGRRVSFKNTLIVMTSNVGSTSISNGKRSIGFQTQTDTEEKSYAAMK 723 Query: 739 ELVLGVVSHNFRPEFINRIDEVVVFHPLGE-------------------QHIASIAQIQL 779 LV+ + FRPE +NRIDEVVVFHPL + + +I I L Sbjct: 724 SLVMEELKAFFRPELLNRIDEVVVFHPLEKTQACCFYRYCTCILPCTFVNTMLAILNIML 783 Query: 780 KRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELV 839 + + R+ G + +SD L+S++GYD YGARPL+RA+ Q +E+ +++ ILSG+ Sbjct: 784 QEVKGRILALGIGLEVSDSMKDLISQHGYDKSYGARPLRRAVTQLVEDVISEAILSGQFK 843 Query: 840 PGKVIRLEVNEDR 852 PG I ++ + Sbjct: 844 PGDTIMVDTDATG 856 >UniRef50_C1ASB5 Putative ATP-dependent Clp protease ATP-binding subunit n=1 Tax=Rhodococcus opacus B4 RepID=C1ASB5_RHOOB Length = 748 Score = 388 bits (995), Expect = e-106, Method: Composition-based stats. Identities = 218/590 (36%), Positives = 311/590 (52%), Gaps = 28/590 (4%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 T + AL AQ+ ++ P H++ ALL+Q+ V P+ + G++A LR Sbjct: 1 MRSGFTTRALEALDWAQAQSIPVA---TRPEHVLMALLDQDATIVEPVFEALGVDADDLR 57 Query: 62 TDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGT 121 R + D+ +L + A++ D+ +S E ++A R Sbjct: 58 RSSPSVTVR-RGAAASAAAPGIDADMASLLRAAEHEARQLSDHLVSIEHLLIALAGRRDG 116 Query: 122 LADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKK-----------YTIDLTE 170 + + L+AAGA +++ +A+ ++RG +V D E ++ Y+ DLTE Sbjct: 117 VGEALRAAGADRSSMLEAVRRVRGPAAVVDAEPERTYLGVRWRPPAVSSQVLRYSRDLTE 176 Query: 171 RAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPE 230 A + +LDPV+GRD EI R IQVL RR KNNPVLIG+PGVGKTAI EGLAQRI+ G+VP Sbjct: 177 LAFRAELDPVVGRDAEIERVIQVLSRRRKNNPVLIGDPGVGKTAIAEGLAQRIVAGDVPA 236 Query: 231 GLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKAD 290 L RRV+ALD+GALVAGA YRGEFE+R+K +L D+ +G +I+FIDELHT+VGAG A+ Sbjct: 237 ALLNRRVIALDVGALVAGATYRGEFEDRVKSLLKDVVGADGGIIVFIDELHTIVGAGAAE 296 Query: 291 GAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAIL 350 GA+DAGN+LKP LARGE +GATTLDEYR+++E D ALERRFQ V V EPS + + +L Sbjct: 297 GAVDAGNLLKPMLARGEFRTLGATTLDEYRKHVESDGALERRFQPVRVDEPSSANALEML 356 Query: 351 RGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPE 410 RGL+ RYE HH V ITD A+ AA +LS RYIADR LPDKAIDLIDEA S R+Q DS Sbjct: 357 RGLRSRYESHHGVAITDAALSAAVSLSDRYIADRFLPDKAIDLIDEACSRRRIQSDSLSS 416 Query: 411 ELDRLDRRIIQLKLEQQALMK----ESDEASKKRLDMLNEELSDKERQYSELEEEWKAEK 466 L + S+ + + L + + R + + KA Sbjct: 417 VTRGAGSCTPPLVDDDDIARLVGQWTGIPVSRLQEEELERLVHMEHRLAERVVGQAKAVV 476 Query: 467 ASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRL 526 + + + L I G L + ++ + L Sbjct: 477 GVSAALRNSRTGLSDPNRPIASLMFCGPLGVGKTYLARVLADV---------MLDSGEAL 527 Query: 527 LRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEA 576 ++ ++D + R G + E +L + + V+ ++ Sbjct: 528 VQLDMSDYAEKHSVTRLVGASPGYVGYEEGGQLTDAVRRRPYCVVLLDDI 577 Score = 332 bits (852), Expect = 3e-89, Method: Composition-based stats. Identities = 167/417 (40%), Positives = 250/417 (59%), Gaps = 33/417 (7%) Query: 452 ERQYSELEEEWKAEKASLSGTQTIKAELEQAK------IAIEQARRVGDLARMSELQYGK 505 ER++ + + + +L + +++ E A+ A + D K Sbjct: 336 ERRFQPVRVDEPSSANALEMLRGLRSRYESHHGVAITDAALSAAVSLSDRYIADRFLPDK 395 Query: 506 IPELEKQLEAATQLEGKTMRLL--------RNKVTDAEIAEVLARWTGIPVSRMMESERE 557 +L + + +++ ++ + V D +IA ++ +WTGIPVSR+ E E E Sbjct: 396 AIDLIDEACSRRRIQSDSLSSVTRGAGSCTPPLVDDDDIARLVGQWTGIPVSRLQEEELE 455 Query: 558 KLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKA 617 +L+ ME L RV+GQ +AV VS A+R SR GL+DPNRPI S +F GP GVGKT L + Sbjct: 456 RLVHMEHRLAERVVGQAKAVVGVSAALRNSRTGLSDPNRPIASLMFCGPLGVGKTYLARV 515 Query: 618 LANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLD 677 LA+ M DS EA+V++DMS++ EKHSV+RLVGA PGYVGYEEGG LT+AVRRRPY V+LLD Sbjct: 516 LADVMLDSGEALVQLDMSDYAEKHSVTRLVGASPGYVGYEEGGQLTDAVRRRPYCVVLLD 575 Query: 678 EVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHM 737 ++E+AHPDV +L QV+DDG LTDGQGR V FR+ +++MTS+L Sbjct: 576 DIEQAHPDVHGLLRQVIDDGSLTDGQGRVVSFRHVILVMTSSLPD--------------- 620 Query: 738 KELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISD 797 LG V+ +FR EF+ R+D+V+ F PL + + + IQ++ + RL +RG + ++ Sbjct: 621 ----LGAVNQHFRAEFLTRLDDVLEFAPLRRKDLEQLVDIQVRSVAARLSDRGIALELTH 676 Query: 798 EALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIV 854 EA L++E G D GARPL R +Q+++ + +++ IL G+ PG IR++ + Sbjct: 677 EARALIAELGDDSRQGARPLVRVVQKELISAVSRSILLGDACPGDTIRVDQEGTSVT 733 >UniRef50_A8SAZ3 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAZ3_9FIRM Length = 765 Score = 388 bits (995), Expect = e-106, Method: Composition-based stats. Identities = 199/573 (34%), Positives = 291/573 (50%), Gaps = 26/573 (4%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 + L A LA + + HL+ A+L Q G+ + LT I ++R + Sbjct: 15 FSRPAARLLQQAVQLAGDLGCEQADTSHLLLAMLQQ-QGAAAQFLTRKNITEPEVRRQL- 72 Query: 66 QALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADI 125 + + DL R ++ AQ + E + A LE G A + Sbjct: 73 --AQQRSGPAQRLDRQSMAPDLRRTMDYALIGAQNAHVSRAEPEHLLCAMLEDDGCAAGL 130 Query: 126 L-KAAGATTANITQAIEQMRGGESVNDQGAED-----QRQALKKYTIDLTERAEQGKLDP 179 L G + + Q+ G + Q +A KY DLT RA +G+LDP Sbjct: 131 LLAEMGLSLTEAVRECRQLSGQFVLPAQPRVSASIPRGSRASDKYCRDLTRRAAEGELDP 190 Query: 180 VIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLA 239 V R+ E+ R +++L RR KN+P LIGEPGVGKTA+ EGLA RI G+VP L+GRR+LA Sbjct: 191 VFCREAELDRMVEILCRRQKNDPCLIGEPGVGKTALAEGLALRIAAGQVPRALQGRRLLA 250 Query: 240 LDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNML 299 LDM +LVAG KYRG+FEERLK +L +L + +G ILFIDE HT+VGAG A+GA+DA ++L Sbjct: 251 LDMASLVAGTKYRGDFEERLKNLLEELVR-DGTAILFIDEFHTIVGAGAAEGAIDAASIL 309 Query: 300 KPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYEL 359 KP LARGEL +GATT E+R +I+KDAALERRF +V V EP+ + IL GL RYE Sbjct: 310 KPVLARGELQLIGATTNQEFRTHIQKDAALERRFGRVQVEEPTPAQAVEILNGLAPRYER 369 Query: 360 HHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRI 419 +H+V++ + AA LS RY+ R LPDKAIDL+DEA ++ R+ + + L Sbjct: 370 YHNVRLPPQTLQAAVELSVRYLPGRCLPDKAIDLVDEACAAARILAEKEQRTQPVLTPED 429 Query: 420 IQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYS-ELEEEWKAEKASLSGTQTIKAE 478 I + + S +++ + E L E + + E+ + +A A + + Sbjct: 430 IA-----RVVAAASGVPAQRVGEQERERLDKLESRLNAEIVGQQRAVAAVAGAIRRSRTG 484 Query: 479 LEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAE 538 L E R +G + + GK L + L + K LL+ +++ + Sbjct: 485 LG------EPGRPIGAMLFLGPTGVGK-TALARALAVSWFGSEKA--LLKFDMSEYQEQH 535 Query: 539 VLARWTGIPVSRMMESEREKLLRMEQELHHRVI 571 AR G P + E +L + + V+ Sbjct: 536 TAARLLGAPPGYLGHDEGGQLTEAVRRRPYSVV 568 Score = 352 bits (903), Expect = 3e-95, Method: Composition-based stats. Identities = 217/784 (27%), Positives = 348/784 (44%), Gaps = 49/784 (6%) Query: 83 PSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAGATTANITQAIEQ 142 S+ R+L +LA G + +LA L+ +G A L T + + + Q Sbjct: 15 FSRPAARLLQQAVQLAGDLGCEQADTSHLLLAMLQQQGAAAQFLTRKNITEPEVRRQLAQ 74 Query: 143 MRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNP 202 R G + + A G + + R E +L+ Sbjct: 75 QRSGPAQRLDRQSMAPDL-----RRTMDYALIGAQNAHVSRAEPEHLLCAMLEDDGCAAG 129 Query: 203 VLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGV 262 +L+ E G+ T V R ++G+ + R ++ G+ A KY + R Sbjct: 130 LLLAEMGLSLTEAVREC--RQLSGQFVLPAQPRVSASIPRGS-RASDKYCRDLTRR---- 182 Query: 263 LNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQY 322 + V EL MV D + +P VG T L E Sbjct: 183 --AAEGELDPVFCREAELDRMVEILCRRQKNDPCLIGEPG--------VGKTALAEGLAL 232 Query: 323 IEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIA 382 + R Q + + +A + + E ++ + Sbjct: 233 RIAAGQVPRALQGRRLLALDMASLVAGTKYRGDFEERLKNL------LEELVR------- 279 Query: 383 DRQLPDKAIDLIDEAASSIRM-QIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRL 441 AI IDE + + + + L + + +L+ + + + Sbjct: 280 ----DGTAILFIDEFHTIVGAGAAEGAIDAASILKPVLARGELQLIGATTNQEFRTHIQK 335 Query: 442 DMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSEL 501 D E + + + L+ + ++ A + Sbjct: 336 DAALERRFGRVQVEEPTPAQAVEILNGLAPRYERYHNVRLPPQTLQAAVELSVRYLPGRC 395 Query: 502 QYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLR 561 K +L + AA ++ + + + +T +IA V+A +G+P R+ E ERE+L + Sbjct: 396 LPDKAIDLVDEACAAARILAEKEQRTQPVLTPEDIARVVAAASGVPAQRVGEQERERLDK 455 Query: 562 MEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANF 621 +E L+ ++GQ AV AV+ AIRRSR GL +P RPIG+ LFLGPTGVGKT L +ALA Sbjct: 456 LESRLNAEIVGQQRAVAAVAGAIRRSRTGLGEPGRPIGAMLFLGPTGVGKTALARALAVS 515 Query: 622 MFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEK 681 F S++A+++ DMSE+ E+H+ +RL+GAPPGY+G++EGG LTEAVRRRPYSV+L DE+EK Sbjct: 516 WFGSEKALLKFDMSEYQEQHTAARLLGAPPGYLGHDEGGQLTEAVRRRPYSVVLFDEIEK 575 Query: 682 AHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELV 741 AHPD+ NILLQ+L+DG+LTD GR DFRNT+V++TSNLG+ + + L +A E V Sbjct: 576 AHPDIQNILLQILEDGQLTDAMGRKADFRNTIVLLTSNLGARFLAGQNAPLGFAAGAEAV 635 Query: 742 L--------GVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 793 FRPE + R+DEV+VF PL E+++ +IA+ L +L +R GY + Sbjct: 636 FEKQSAQAVEEAKKWFRPELLGRLDEVIVFRPLAEENLCAIAEKMLCQLEQRAARSGYRL 695 Query: 794 HISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRI 853 + + YGAR L+R + + +E LA +I +G G+ + D Sbjct: 696 RHTPQV-GAALAARAQSAYGARELRRQVDRAVEQALANRIAAGTACVGQHWTADCAADGS 754 Query: 854 VAVQ 857 + ++ Sbjct: 755 IVLR 758 >UniRef50_C7H753 ATP-dependent Clp protease, ATP-binding subunit ClpC n=2 Tax=Ruminococcaceae RepID=C7H753_9FIRM Length = 777 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 195/572 (34%), Positives = 279/572 (48%), Gaps = 24/572 (4%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 + + L L +A LA + HL+ A+L + G L I +R + Sbjct: 24 FSREAGLLLDEAVELAGSMGCARADTGHLLLAMLQTDRGPAGRFLAGKNITEPAVRRQLA 83 Query: 66 QALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADI 125 + R + DL R ++ AQ E + A LE A + Sbjct: 84 E--GRTSPARQLDRK-ALAPDLRRAMDYALIGAQNAHLPKAEPEHLLCAMLEDTDCAAGV 140 Query: 126 LKAAGATT-----ANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPV 180 L A+ Q Q + +A KY DLT RA G+LDPV Sbjct: 141 LLASMGVQLAEAVRECRQISGQFILPGTPRASAMPRGSRASDKYCRDLTRRAVDGELDPV 200 Query: 181 IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL 240 RD E+ R +++L RR KNNP L+GEPGVGKTA+ EGLAQRI + VP L+GRR+LAL Sbjct: 201 FCRDAELDRMVEILCRRQKNNPCLVGEPGVGKTALAEGLAQRIASRNVPRMLQGRRLLAL 260 Query: 241 DMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLK 300 DM +LVAG KYRG+FEER K +L +L + +G+ ILF+DE HT+VGAG A+GA+DA ++LK Sbjct: 261 DMASLVAGTKYRGDFEERFKTLLEELVR-DGSAILFVDEFHTIVGAGAAEGAIDAASILK 319 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELH 360 P LARGEL +GATT E+R +I+KDAALERRF +V + EP+ AIL GL RYE + Sbjct: 320 PVLARGELQLIGATTDQEFRTHIQKDAALERRFGRVQIEEPTPAQAAAILEGLAPRYERY 379 Query: 361 HHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRII 420 H V + + A LS RY+ R LPDKAIDL+DEA ++ R++ + + + L R I Sbjct: 380 HSVHLPPETLREAVELSVRYLPGRFLPDKAIDLVDEACAAARIRAEREGKADPTLTREDI 439 Query: 421 QLKLEQQALMKESDEASKKRLDMLNEELSDKERQYS-ELEEEWKAEKASLSGTQTIKAEL 479 + Q + + K+R E L E + + E+ + KA A + + L Sbjct: 440 ARVVAQASGVPVERVGEKER-----ERLDKLESRLNAEIVGQQKAVAAVAGAIRRSRTGL 494 Query: 480 EQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEV 539 + + M L + + A G LL+ +++ + Sbjct: 495 GE---------PGRPMGAMLFLGPTGVGKTALAKALAASWFGSEKALLKFDMSEYQEQHT 545 Query: 540 LARWTGIPVSRMMESEREKLLRMEQELHHRVI 571 AR G P + E +L + + V+ Sbjct: 546 TARLLGAPPGYLGHDEGGQLTEAVRRRPYSVV 577 Score = 323 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 171/479 (35%), Positives = 263/479 (54%), Gaps = 10/479 (2%) Query: 388 DKAIDLIDEAASSIRM-QIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNE 446 AI +DE + + + + L + + +L+ + + + + D E Sbjct: 290 GSAILFVDEFHTIVGAGAAEGAIDAASILKPVLARGELQLIGATTDQEFRTHIQKDAALE 349 Query: 447 ELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKI 506 + + + A L+ + + +A + K Sbjct: 350 RRFGRVQIEEPTPAQAAAILEGLAPRYERYHSVHLPPETLREAVELSVRYLPGRFLPDKA 409 Query: 507 PELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQEL 566 +L + AA ++ + +T +IA V+A+ +G+PV R+ E ERE+L ++E L Sbjct: 410 IDLVDEACAAARIRAEREGKADPTLTREDIARVVAQASGVPVERVGEKERERLDKLESRL 469 Query: 567 HHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSD 626 + ++GQ +AV AV+ AIRRSR GL +P RP+G+ LFLGPTGVGKT L KALA F S+ Sbjct: 470 NAEIVGQQKAVAAVAGAIRRSRTGLGEPGRPMGAMLFLGPTGVGKTALAKALAASWFGSE 529 Query: 627 EAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDV 686 +A+++ DMSE+ E+H+ +RL+GAPPGY+G++EGG LTEAVRRRPYSV+L DE+EKAHPD+ Sbjct: 530 KALLKFDMSEYQEQHTTARLLGAPPGYLGHDEGGQLTEAVRRRPYSVVLFDEIEKAHPDI 589 Query: 687 FNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVL---- 742 NILLQ+L+DG+LTD GR DFRNT+V++TSNLG+ + + L +A E V Sbjct: 590 QNILLQILEDGQLTDAMGRKADFRNTIVLLTSNLGARFLAGQSAPLGFAAGSEAVFEKQS 649 Query: 743 ----GVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE 798 FRPE + R+DE++VF PL E + +IA+ L +L R GY++ + Sbjct: 650 AQAIEEAKKWFRPELVGRLDELIVFRPLAEDSLCAIAEKLLGQLEARAARNGYQLTHTPR 709 Query: 799 ALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857 +L+ P YGAR L+R + + +E LA QI SG G+ + D + ++ Sbjct: 710 VGAVLAARARSP-YGARELRRQVDRAVEQALANQIASGTAHTGQHWTADCTVDGAIVLE 767 >UniRef50_A9AYE5 ATPase AAA-2 domain protein n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AYE5_HERA2 Length = 776 Score = 385 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 202/584 (34%), Positives = 302/584 (51%), Gaps = 22/584 (3%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +RL Q + AQ A ++ F+ P HL+ LL Q+ G +L G+ Q R Sbjct: 5 FERLNPNIQHIMLLAQEEARSLNHSFLGPEHLLLGLLRQKEGLAVQILHELGVFYPQTRQ 64 Query: 63 DINQALNRLPQVEGT--GGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES-R 119 I + + E T + + +L+ + A + I E +LA + Sbjct: 65 IIQTMITPHARDEQTLLPAYLPLAPHTKTLLDTAAREADQLNQQQIGPEQLLLALAREAK 124 Query: 120 GTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQAL-KKYTIDLTERAEQGKLD 178 G + IL G + + ++ ++ A +L K I+LTE A G+LD Sbjct: 125 GFVPYILARLGLHGSIVCDSLHAALQAKATEVAPAHAADTSLLAKLGINLTEEARNGRLD 184 Query: 179 PVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVL 238 PVIGR EI RTIQ+L+RRTKNN VLIGEPGVGKTAIVEGLAQ++ +G +P + V Sbjct: 185 PVIGRSAEIERTIQILRRRTKNNVVLIGEPGVGKTAIVEGLAQQLAHGAIP-SFQKTSVW 243 Query: 239 ALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNM 298 +LD+G+L+AGA YRG+FEERLK V++ + + + ILFIDELH +VGAG ++ +DA NM Sbjct: 244 SLDVGSLLAGAIYRGQFEERLKSVIDQI--SDHDAILFIDELHMIVGAGASENTVDAANM 301 Query: 299 LKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYE 358 LKPALARG+L +GATT DEY Q+IEKD+AL+RRFQ + V EP +E+T+ IL+G++ +YE Sbjct: 302 LKPALARGKLRVIGATTFDEYSQHIEKDSALKRRFQPIVVQEPGIEETVTILQGIRPKYE 361 Query: 359 LHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSI-----RMQIDSKPEELD 413 HH + ++D A+ AA L+ +YI D LP KAIDL+DEAAS + R + Sbjct: 362 AHHELSLSDEALYTAARLAAQYIPDLYLPGKAIDLLDEAASRVWYYRQRQLVAHDAASSA 421 Query: 414 RLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQY-SELEEEWKAEKASLSGT 472 ++ + Q L ++ + + D E+ + + +A + Sbjct: 422 EAPTTVVCGRDVAQVLAIQTGIPLAQLFSDGLNRIEDIEQILSQRVIGQAQAIRGVTKAI 481 Query: 473 QTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVT 532 Q A L + +G L + GK EL K L A L G L+R ++ Sbjct: 482 QRAFAGL------KTKQDLIGALLFLGPSGVGK-TELSKVL--AEYLLGSNKALIRMDMS 532 Query: 533 DAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEA 576 + A ++R G P + + +L + + V+ + Sbjct: 533 EYAEAHSVSRLIGAPPGYIGYDQGGQLSESVRRRPYSVVLLDNI 576 Score = 319 bits (816), Expect = 4e-85, Method: Composition-based stats. Identities = 196/809 (24%), Positives = 353/809 (43%), Gaps = 98/809 (12%) Query: 82 QPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL-ESRGTLADILKAAGATTANITQAI 140 + + ++ ++ L + A+ +F+ E +L L + G IL G Q I Sbjct: 7 RLNPNIQHIMLLAQEEARSLNHSFLGPEHLLLGLLRQKEGLAVQILHELGVFYPQTRQII 66 Query: 141 EQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKN 200 + M + ++Q L +T L + A R+ + Q+ Sbjct: 67 QTMITPHARDEQTLLPAYLPLAPHTKTLLDTAA---------READQLNQQQI------- 110 Query: 201 NPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGAL-VAGAKYRGEFEERL 259 G ++ LA+ G VP L L + G+ L Sbjct: 111 ----------GPEQLLLALARE-AKGFVPYIL----------ARLGLHGSIVCDSLHAAL 149 Query: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319 + ++A + + G L P + R E Sbjct: 150 QAKATEVAPAHAA------DTSLLAKLGINLTEEARNGRLDPVIGR----------SAEI 193 Query: 320 RQYIEKDAALERRF--QKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLS 377 + I+ L RR V + EP V T AI+ GL ++ ++ + S Sbjct: 194 ERTIQ---ILRRRTKNNVVLIGEPGVGKT-AIVEGLAQQLAHGAIPSFQKTSVWSLDVGS 249 Query: 378 ----HRYIADRQLPDKA-IDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKE 432 Y + K+ ID I + + + + + + + + AL + Sbjct: 250 LLAGAIYRGQFEERLKSVIDQISDHDAILFIDELHMIVGAGASENTVDAANMLKPALARG 309 Query: 433 SDEASKKRLDMLNEELSDK----ERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQ 488 + +K +R++ + + + +++ Q I+ + E Sbjct: 310 KLRVIGATTFDEYSQHIEKDSALKRRFQPIVVQEPGIEETVTILQGIRPKYEAHHELSLS 369 Query: 489 ARRVGDLARMSELQYGKIPELEKQLEAAT----------------QLEGKTMRLLRNKVT 532 + AR++ + K ++ + V Sbjct: 370 DEALYTAARLAAQYIPDLYLPGKAIDLLDEAASRVWYYRQRQLVAHDAASSAEAPTTVVC 429 Query: 533 DAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLA 592 ++A+VLA TGIP++++ ++ +EQ L RVIGQ +A+ V+ AI+R+ AGL Sbjct: 430 GRDVAQVLAIQTGIPLAQLFSDGLNRIEDIEQILSQRVIGQAQAIRGVTKAIQRAFAGLK 489 Query: 593 DPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPG 652 IG+ LFLGP+GVGKTEL K LA ++ S++A++R+DMSE+ E HSVSRL+GAPPG Sbjct: 490 TKQDLIGALLFLGPSGVGKTELSKVLAEYLLGSNKALIRMDMSEYAEAHSVSRLIGAPPG 549 Query: 653 YVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNT 712 Y+GY++GG L+E+VRRRPYSV+LLD ++ AHPDV NI +Q+L++G +TD +GR VDFRN Sbjct: 550 YIGYDQGGQLSESVRRRPYSVVLLDNIDYAHPDVINIFIQILEEGSITDARGRYVDFRNV 609 Query: 713 VVIMTSNLGSDLIQERFG------------ELDYAHMKELVLGVVSHNFRPEFINRIDEV 760 +++ T+N+G++L + + G Y H+K+ L + + +F++R+++V Sbjct: 610 LLLCTANVGTELFKRQTGLGFRAELPEIDQVARYEHLKQQALDKIKTSLSLDFLHRLNDV 669 Query: 761 VVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRA 820 ++F PL +H+ +A + L+ + + + + ++ A L+++GYD G R L+ Sbjct: 670 ILFQPLQAEHLEVLAGLFLQDVRQMVLAHEIRLDLTSNAHTYLTDHGYDLERGVRRLRHL 729 Query: 821 IQQQIENPLAQQILSGELVPGKVIRLEVN 849 IQ I +P++ +L G+ G + ++ + Sbjct: 730 IQTHIVDPISNGLLHGKYRAGDELLIDCD 758 >UniRef50_C3KS27 Chaperone ClpB n=2 Tax=Clostridium botulinum RepID=C3KS27_CLOB6 Length = 746 Score = 384 bits (987), Expect = e-105, Method: Composition-based stats. Identities = 206/598 (34%), Positives = 317/598 (53%), Gaps = 18/598 (3%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +++L N+ + L++A+ +A+ ++ IE L + +V +L I+ L Sbjct: 1 MNKLNNELKQVLSEAKFIAIKFNHTRIEVEDFFIVLAKHKNSNVYKILRLLNIDVKDLIN 60 Query: 63 DINQA---LNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESR 119 ++ N + + + S L ++ A + I S+ +LA + Sbjct: 61 EVVSEYKDKNSIRYSQEMLDSIVASDSLKEIIMKASIEAINMKNELIESQHILLALSKED 120 Query: 120 GTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDP 179 TL +K G + I + + +++ N D+ L KY IDLT+ A + K + Sbjct: 121 STLGKKIKNKGIDESKILEGLSKIQFSNEKNYNS--DEESFLNKYAIDLTKCALENKFNM 178 Query: 180 VIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLA 239 V+GR++E+ I++L R++KNNPVLIGEPGVGKTAIVEGLA I+ G+VP+ LK +++ + Sbjct: 179 VLGREDELGYVIEILLRKSKNNPVLIGEPGVGKTAIVEGLACLIVQGKVPDELKNKKIYS 238 Query: 240 LDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNML 299 LD+GALVAG+K+RGEFEERLK V+ ++ G +ILFIDE+HT+VGAG DG MDA N+L Sbjct: 239 LDLGALVAGSKFRGEFEERLKKVITEIQNSYGQIILFIDEMHTLVGAGSTDGPMDASNLL 298 Query: 300 KPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYEL 359 KPALARGELHC+GATT+ EYR+YIEKD ALERRF+ V V EPS+E TI IL G+K YE Sbjct: 299 KPALARGELHCIGATTIKEYRKYIEKDPALERRFKTVLVEEPSIEKTIHILDGIKNIYED 358 Query: 360 HHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRI 419 +H+V+ AI AA TLS RYI++R LPDKAIDL+DEAA+ ++ + + Sbjct: 359 YHNVKFNRSAIKAAVTLSSRYISERFLPDKAIDLLDEAAARKKIISKVDRDNSSDVIEVK 418 Query: 420 IQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLS-GTQTIKAE 478 E SK +++ L D+ R+ LE K + Q + Sbjct: 419 KSDIAE---------IVSKWTKIPVSDLLEDEARKLRNLESHLKKRVIGQNKAVQAVSNA 469 Query: 479 LEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAE 538 + ++++ + R+ EL L A L ++R +++ + Sbjct: 470 VIRSRVCLSNPRKPIGSFIFLGPTGVGKTELACNL--AKILFNDIDSVIRIDMSEYQDKS 527 Query: 539 VLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNR 596 +LAR G P + E +L + + ++ +E ++ I + D R Sbjct: 528 MLARLIGAPPGYVGYEEGGQLTEKVRCRPYSIVLLDE-IEKAHRDIVNIMLQILDDGR 584 Score = 347 bits (889), Expect = 1e-93, Method: Composition-based stats. Identities = 221/781 (28%), Positives = 367/781 (46%), Gaps = 56/781 (7%) Query: 82 QPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGT-LADILKAAGATTANITQAI 140 + + +L +VL+ +A K I E F + + + + + IL+ ++ + Sbjct: 3 KLNNELKQVLSEAKFIAIKFNHTRIEVEDFFIVLAKHKNSNVYKILRLLNIDVKDLINEV 62 Query: 141 EQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKN 200 ++ E + + L E + ++ I E+ + +L +K Sbjct: 63 VSEYKDKNSIRYSQEMLDSIVA--SDSLKEIIMKASIEA-INMKNELIESQHILLALSKE 119 Query: 201 NPVL---IGEPGVGKTAIVEGLAQRIINGEVP-----EGLKGRRVLALDMGALVAGAKYR 252 + L I G+ ++ I+EGL++ + E E + + L AL Sbjct: 120 DSTLGKKIKNKGIDESKILEGLSKIQFSNEKNYNSDEESFLNKYAIDLTKCALENKFNMV 179 Query: 253 GEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVG 312 E+ L V+ L ++ N + I E G L + +G++ Sbjct: 180 LGREDELGYVIEILLRKSKNNPVLIGE--------PGVGKTAIVEGLACLIVQGKV---- 227 Query: 313 ATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVA 372 DE + L E ++ ++ Y +V Sbjct: 228 ---PDELKNKKIYSLDLGALVAGSKFRGEFEERLKKVITEIQNSYGQIILFIDEMHTLVG 284 Query: 373 AATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKE 432 A P A +L+ A + + + E Sbjct: 285 A--------GSTDGPMDASNLLKPALARGELHCIGATTIKEYRKYI-------------E 323 Query: 433 SDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRV 492 D A ++R + E E+ K +K K A+ + R Sbjct: 324 KDPALERRFKTVLVEEPSIEKTIH----ILDGIKNIYEDYHNVKFNRSAIKAAVTLSSRY 379 Query: 493 GDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMM 552 + + + E + + ++++ + +V ++IAE++++WT IPVS ++ Sbjct: 380 ISERFLPDKAIDLLDEAAARKKIISKVDRDNSSDV-IEVKKSDIAEIVSKWTKIPVSDLL 438 Query: 553 ESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKT 612 E E KL +E L RVIGQN+AV AVSNA+ RSR L++P +PIGSF+FLGPTGVGKT Sbjct: 439 EDEARKLRNLESHLKKRVIGQNKAVQAVSNAVIRSRVCLSNPRKPIGSFIFLGPTGVGKT 498 Query: 613 ELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYS 672 EL LA +F+ ++++RIDMSE+ +K ++RL+GAPPGYVGYEEGG LTE VR RPYS Sbjct: 499 ELACNLAKILFNDIDSVIRIDMSEYQDKSMLARLIGAPPGYVGYEEGGQLTEKVRCRPYS 558 Query: 673 VILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGEL 732 ++LLDE+EKAH D+ NI+LQ+LDDGR+TDGQGRT++FRNT++IMTSN+GS I + E Sbjct: 559 IVLLDEIEKAHRDIVNIMLQILDDGRVTDGQGRTINFRNTIIIMTSNIGSKDILK---ED 615 Query: 733 DYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYE 792 D + + + + F PEF+NRIDE ++F PL + + I +QL+ +L+ + + Sbjct: 616 DEEKLNQKIKKELIKEFSPEFLNRIDESIIFKPLSKDSLIKIISLQLREFIAQLQNKNIK 675 Query: 793 IHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDR 852 ++I++ L+ + D +GARP++R+IQ +I P++++I+ G +V G I + N Sbjct: 676 VNITENVKLLILDYLEDLQFGARPIRRSIQSKIITPISRKIVEGNIVEGDSILIFDNGKE 735 Query: 853 I 853 I Sbjct: 736 I 736 >UniRef50_UPI000198575F PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera RepID=UPI000198575F Length = 923 Score = 384 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 179/479 (37%), Positives = 268/479 (55%), Gaps = 11/479 (2%) Query: 390 AIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELS 449 A IDE L Q + + L + + E ++ Sbjct: 427 ASTTIDEYVKLFEKDKALARRFQPVLINEPSQEEAVRILLGLREKYEAHHKCRFTLEAIN 486 Query: 450 DKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPEL 509 + + + ++ ++ ++ ++ L + + + +I + Sbjct: 487 AAVHLSARYIPDRRLPDKAIDLIDEAGSKARMEAYKRKKEKQTSVLLKSPDDYWQEIRAV 546 Query: 510 EKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHR 569 + E + ++ V EIA V + W+GIPV ++ ER L+ + ++L R Sbjct: 547 KAMHEMMIMSMTLSPWIIPIVVGPNEIAVVASLWSGIPVQQITADERMLLVGLHEQLRKR 606 Query: 570 VIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAM 629 V+GQ+ A+ ++S A++RSR GL DPNRPI + LF GPTGVGKTEL KALA F S+ AM Sbjct: 607 VVGQDNAIASISRAVKRSRVGLKDPNRPIAAMLFCGPTGVGKTELAKALAACYFGSEAAM 666 Query: 630 VRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNI 689 VR+DMSE+ME+HSVS+L+G+PPGYVGY EGG LTEA+RR+P++V+LLDE+EKAHPD+FNI Sbjct: 667 VRLDMSEYMEQHSVSKLIGSPPGYVGYGEGGTLTEAIRRQPFTVVLLDEIEKAHPDIFNI 726 Query: 690 LLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGEL-----------DYAHMK 738 LLQ+ +DG LTD QGR V FRN +V+MTSN+GS I + YA MK Sbjct: 727 LLQMFEDGHLTDSQGRRVLFRNALVVMTSNVGSAAIAKGRQSSIGFSIADDEPTSYAGMK 786 Query: 739 ELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE 798 LV+ + FRPE +NR+DE+VVFHPL + + I L+ + +RL G + +S Sbjct: 787 ALVMEELKAYFRPELLNRLDEIVVFHPLEKAQMLEILNTMLQEVKERLSSLGIGMEVSVS 846 Query: 799 ALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857 + LL + GYD YGARPL+RA+ IE+PL++ +L+ E PG + ++++ V+ Sbjct: 847 VIDLLCQQGYDKNYGARPLRRAVTLIIEDPLSEALLTEEYQPGDIAVVDLDASGNPFVR 905 Score = 371 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 185/647 (28%), Positives = 281/647 (43%), Gaps = 75/647 (11%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 +R T + A+ +Q A + HL+ L+ ++ +GI R Sbjct: 78 FERFTERAIKAVIFSQREAKALGRNMVFTQHLLLGLVAEDRSL--DGFLGSGITIDDARD 135 Query: 63 DINQA------------LNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSEL 110 + + + DV S RV + ++ G NFI+ E Sbjct: 136 AVRSIWHDYNDSSIISGIPSSQTSVASSTDVPFSISTKRVFEAAIEYSRTMGYNFIAPEH 195 Query: 111 FVLAALE-SRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQ---------- 159 + G+ +LK GA ++ GE D Sbjct: 196 IAIGLFTVDDGSAGRVLKRLGANVNHLAAVAVSRLQGELAKDGSEPSATFKGMQGKSFSG 255 Query: 160 ---------------ALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204 AL ++ +DLT RA G +DPVIGRD E++R +Q+L RRTKNNP+L Sbjct: 256 KAAIVKSSGKKKEKSALAQFCVDLTARATDGLIDPVIGRDMEVQRVVQILCRRTKNNPIL 315 Query: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264 +GE GVGKTAI EGLA I +VP L +R+++LD+G L+AG K RGE E R+ +++ Sbjct: 316 LGESGVGKTAIAEGLAISIAEADVPSFLLTKRIMSLDIGLLMAGTKERGELEARVTTLIS 375 Query: 265 DLAKQEGNVILFIDELHTMVGAG-----KADGAMDAGNMLKPALARGELHCVGATTLDEY 319 D+ K GN+ILFIDE+H +VG+G +D ++LKP+L RG+L C +TT+DEY Sbjct: 376 DILKS-GNIILFIDEVHMLVGSGIAGRGNKGSGLDIASLLKPSLGRGQLQCFASTTIDEY 434 Query: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379 + EKD AL RRFQ V + EPS E+ + IL GL+E+YE HH + T AI AA LS R Sbjct: 435 VKLFEKDKALARRFQPVLINEPSQEEAVRILLGLREKYEAHHKCRFTLEAINAAVHLSAR 494 Query: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439 YI DR+LPDKAIDLIDEA S RM+ + +E Q+ ++ Sbjct: 495 YIPDRRLPDKAIDLIDEAGSKARMEAYKRKKEKQTSVLLKSPDDYWQEIRAVKAMHEMMI 554 Query: 440 RLDMLNEEL---------------------------SDKERQYSELEEEWKAEKASLSGT 472 L+ + ++ E+ K + Sbjct: 555 MSMTLSPWIIPIVVGPNEIAVVASLWSGIPVQQITADERMLLVGLHEQLRKRVVGQDNAI 614 Query: 473 QTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVT 532 +I ++++++ ++ R EL K L A G ++R ++ Sbjct: 615 ASISRAVKRSRVGLKDPNRPIAAMLFCGPTGVGKTELAKALAA--CYFGSEAAMVRLDMS 672 Query: 533 DAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDA 579 + +++ G P + E L + V+ +E A Sbjct: 673 EYMEQHSVSKLIGSPPGYVGYGEGGTLTEAIRRQPFTVVLLDEIEKA 719 >UniRef50_Q6ETV8 Putative uncharacterized protein n=4 Tax=Poaceae RepID=Q6ETV8_ORYSJ Length = 822 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 175/432 (40%), Positives = 266/432 (61%), Gaps = 25/432 (5%) Query: 446 EELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAK------IAIEQARRVGDLARMS 499 E + ER++ ++ E +A+++ Q +K E+ AI A ++ D Sbjct: 343 ERDAAFERRFQKVIVEEPTTQATIAILQGLKQRYEEHHGLKIQDAAIVAAAQLADRYITG 402 Query: 500 ELQYGKIPELEKQLEAATQLEGKTMRLLRNK------------------VTDAEIAEVLA 541 K +L + + +L+ + + + V +A+V++ Sbjct: 403 RQFPDKAIDLIDEACSTVRLKIDSQKGVNTTGMQNNNGNTSVNGVNEAIVGPDHVAQVVS 462 Query: 542 RWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSF 601 RWTGIPV+ + + E+EKL+ + LH RV+GQ+EAV V+ A+ RSRAGL P +PIGSF Sbjct: 463 RWTGIPVTTLDQEEKEKLIHLADRLHERVVGQDEAVKLVAQAVLRSRAGLEQPGQPIGSF 522 Query: 602 LFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGY 661 LFLG TGVGKTEL KALA +FDS++ ++R DMSEF+ SV RL+GAPP Y G+++GG Sbjct: 523 LFLGSTGVGKTELAKALAEQLFDSEKMLIRFDMSEFVGSGSVLRLIGAPPSYHGHQDGGQ 582 Query: 662 LTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLG 721 LTE VR RPYSVIL DEVEKA P VFN+ LQ+LDDG LTDG+GRTVDF+NT++IMTSNLG Sbjct: 583 LTEKVRTRPYSVILFDEVEKADPSVFNVFLQLLDDGMLTDGKGRTVDFKNTIIIMTSNLG 642 Query: 722 SDLIQER-FGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLK 780 ++ + E GE ++LV+ V FRPE +NR+ E+V+F PL ++ + +IQ+K Sbjct: 643 AEHLTEGVTGERTMEAARDLVMKQVQKYFRPELLNRLSEIVIFEPLSHDNLKEVVKIQMK 702 Query: 781 RLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVP 840 + + +G + SD+AL ++ Y+P+YGARP++R +Q+ + L++ +++G+ Sbjct: 703 SVVTSVAHKGVSLLASDDALDVILSESYNPMYGARPVRRWVQKNVMTKLSEMLITGDAGQ 762 Query: 841 GKVIRLEVNEDR 852 G I ++ +D+ Sbjct: 763 GSTISIDATDDK 774 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 179/437 (40%), Positives = 250/437 (57%), Gaps = 14/437 (3%) Query: 152 QGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVG 211 A + AL+ Y D+T A DPVIGRD+E+ R + +L RRTKN+ VL+G PGVG Sbjct: 172 PVAPPKETALRTYGRDMTGSAA--AADPVIGRDDEVDRVVCILCRRTKNSAVLVGAPGVG 229 Query: 212 KTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEG 271 KTAI EGLA+R+ G+VP L G RV+ LD+G+LVAG +YRG FEER+K V+ + G Sbjct: 230 KTAIAEGLARRVAAGDVPAALAGARVVELDVGSLVAGTQYRGMFEERVKKVIQEAEGAAG 289 Query: 272 NVILFIDELHTMVGAGKADGA-MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALE 330 VILFIDE+H ++GAG G MD N+LKPALARG + CVGATT DEYR++IE+DAA E Sbjct: 290 KVILFIDEMHMLLGAGACKGGSMDGANLLKPALARGRIRCVGATTFDEYRKHIERDAAFE 349 Query: 331 RRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKA 390 RRFQKV V EP+ + TIAIL+GLK+RYE HH ++I D AIVAAA L+ RYI RQ PDKA Sbjct: 350 RRFQKVIVEEPTTQATIAILQGLKQRYEEHHGLKIQDAAIVAAAQLADRYITGRQFPDKA 409 Query: 391 IDLIDEAASSIRMQIDSKPEE----LDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNE 446 IDLIDEA S++R++IDS+ + + + + + + R + Sbjct: 410 IDLIDEACSTVRLKIDSQKGVNTTGMQNNNGNTSVNGVNEAIVGPDHVAQVVSRWTGIPV 469 Query: 447 ELSDKERQYSELE---EEWKAEKASLSGTQTIKAELEQAKIAIEQA-RRVGDLARMSELQ 502 D+E + + + + + + +++ +EQ + +G + Sbjct: 470 TTLDQEEKEKLIHLADRLHERVVGQDEAVKLVAQAVLRSRAGLEQPGQPIGSFLFLGSTG 529 Query: 503 YGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRM 562 GK EL K L A QL L+R +++ + + R G P S + +L Sbjct: 530 VGK-TELAKAL--AEQLFDSEKMLIRFDMSEFVGSGSVLRLIGAPPSYHGHQDGGQLTEK 586 Query: 563 EQELHHRVIGQNEAVDA 579 + + VI +E A Sbjct: 587 VRTRPYSVILFDEVEKA 603 >UniRef50_A4FG52 Clp protease ATP binding subunit n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FG52_SACEN Length = 768 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 183/422 (43%), Positives = 268/422 (63%), Gaps = 15/422 (3%) Query: 446 EELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKI------AIEQARRVGDLARMS 499 E+ ER++ + + +++ + ++ + A+ A R+ Sbjct: 325 EKDPALERRFQPILVAEPSVGDTVAVLRGLRDRYQLHHRVVIADDALVAAARLSQRYIAD 384 Query: 500 ELQYGKIPELEKQLEAATQLEGKTMR-------LLRNKVTDAEIAEVLARWTGIPVSRMM 552 K +L Q + +L + V ++A+V++R TGIPVS + Sbjct: 385 RFLPDKAVDLLDQACSRVRLLRGGSPNDPGSSAEHQPSVGRDDVADVVSRRTGIPVSDLT 444 Query: 553 ESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKT 612 +++++LL +E+ L +VIGQ+ AV +V+ A+RR+RAGLADP RPIGSFLFLGPTGVGKT Sbjct: 445 AADKQRLLGLEKVLRSKVIGQDAAVRSVAEAVRRARAGLADPERPIGSFLFLGPTGVGKT 504 Query: 613 ELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYS 672 EL +ALA +F + ++R DM EF EKH+VSRL+GAPPGYVGY E G LT+ VRR+PYS Sbjct: 505 ELARALARALFGDAQRLIRFDMGEFQEKHTVSRLIGAPPGYVGYGESGQLTDRVRRQPYS 564 Query: 673 VILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGEL 732 V+LLDEVEKAHPDVFN LLQ+LD+GRL+D QGR+VDFRN VVIMTSN+G+D I + G Sbjct: 565 VLLLDEVEKAHPDVFNTLLQLLDEGRLSDAQGRSVDFRNVVVIMTSNIGADRILDAGGSA 624 Query: 733 DYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYE 792 + ++ +L + FRPEFINRID+V VF PLG + I + L+R Y++L RG Sbjct: 625 GDSALE--LLEELRSFFRPEFINRIDDVTVFQPLGPAALREITGLLLERTYQQLLARGIG 682 Query: 793 IHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDR 852 + +++ A+ L+E G+ P +GARPL+R IQ++++N LA ++ GEL G + ++ + Sbjct: 683 MEVTEAAVAWLAERGHQPEFGARPLRRVIQRELDNRLAAMVIDGELSSGHRVLVDAVGED 742 Query: 853 IV 854 +V Sbjct: 743 LV 744 Score = 381 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 196/579 (33%), Positives = 301/579 (51%), Gaps = 22/579 (3%) Query: 4 DRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTD 63 + L + ++ A + ++ ++ HL+ A+ G + +L +G+ +L + Sbjct: 15 NLLDEQAHEVVSKAIRATVEWGSRELDSAHLLWAVTQV--GPTARMLGDSGVRVEELASA 72 Query: 64 INQALNRLPQVEG-TGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTL 122 + + G G S R L + A G + + + +L ++ Sbjct: 73 VRTVAGTYDALGGQAQGKPVLSSSARRALLGAHQQALSEGADAVGARHVLLGLATDADSV 132 Query: 123 ADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIG 182 A + +A+E+ L ++ +D+TE A G+LDPV+G Sbjct: 133 AG---------RALARAMERSERTRPNARPSVLSTTPKLDEFGMDMTELARAGRLDPVVG 183 Query: 183 RDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDM 242 R +E+ + ++VL RRTKNNPV IG+PGVGKTAIVEGLAQRI++G VP L GRRV++LD+ Sbjct: 184 RSQEVEQAVEVLGRRTKNNPVFIGDPGVGKTAIVEGLAQRIVDGAVPWSLAGRRVVSLDL 243 Query: 243 GALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPA 302 +VAGAKYRGEFE+R + ++N++ + V++FIDE+H +VGAG +G MDAG MLKPA Sbjct: 244 AGMVAGAKYRGEFEQRFRDLMNEIRQHRDEVLVFIDEIHGIVGAGAGEGTMDAGTMLKPA 303 Query: 303 LARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHH 362 LARGE+ VGATT++EYR++IEKD ALERRFQ + VAEPSV DT+A+LRGL++RY+LHH Sbjct: 304 LARGEVQVVGATTVEEYRKHIEKDPALERRFQPILVAEPSVGDTVAVLRGLRDRYQLHHR 363 Query: 363 VQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEEL--DRLDRRII 420 V I D A+VAAA LS RYIADR LPDKA+DL+D+A S +R+ P + + + Sbjct: 364 VVIADDALVAAARLSQRYIADRFLPDKAVDLLDQACSRVRLLRGGSPNDPGSSAEHQPSV 423 Query: 421 QLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELE 480 + + + + L E+ A +++ + Sbjct: 424 GRDDVADVVSRRTGIPVSDLTAADKQRLLGLEKVLRSKVIGQDA------AVRSVAEAVR 477 Query: 481 QAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVL 540 +A+ + R EL + L A L G RL+R + + + + Sbjct: 478 RARAGLADPERPIGSFLFLGPTGVGKTELARAL--ARALFGDAQRLIRFDMGEFQEKHTV 535 Query: 541 ARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDA 579 +R G P + E +L + + V+ +E A Sbjct: 536 SRLIGAPPGYVGYGESGQLTDRVRRQPYSVLLLDEVEKA 574 >UniRef50_A7HAC7 ATPase AAA-2 domain protein n=6 Tax=Cystobacterineae RepID=A7HAC7_ANADF Length = 840 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 233/873 (26%), Positives = 384/873 (43%), Gaps = 80/873 (9%) Query: 9 KFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQAL 68 + +A+A +A + + H + A LL GI+ +L + Sbjct: 9 ELAQVIAEAADIAASVKQK-LTSAHQLLAFFTVPN-RAEILLKERGIDEDRLLAAM---- 62 Query: 69 NRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKA 128 TG +P L + ++A+ G + ++A R + A L Sbjct: 63 --------TGKPKEPEGVLRDLRERSREVAESVGAEEVDCLHLLIAMGRVRASAAHQLLG 114 Query: 129 AGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIR 188 A + + + S+ + E Q ++ LT +++ Sbjct: 115 ACGLQLSTLRNVALSYFTASMPRRLRELQPVQVRP-AQPLTPPRRSEPRARAADPSRDLQ 173 Query: 189 ---RTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRII----NGEVPEGLKGRRVLALD 241 Q L T + + P G +A + ++ + + PE R ++ D Sbjct: 174 LDAHLEQALGDATATDGEAV-HPERGVSAAADTRSRGTTPPPTSTDAPEAAHPERSVSAD 232 Query: 242 MGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKP 301 A + RG + L EL + G+ + A L P Sbjct: 233 -----AETRSRG------------TRARRSPHALDPKELPWLSQLGRNLTELAAAGRLDP 275 Query: 302 ALARGELHCVGATTLDEYRQYIEKDAALERRFQ-KVFVAEPSVEDTIAILRGLKERYELH 360 + R E D +RR + V EP V T AI+ G+ +R Sbjct: 276 LVGR------------EQEVEEAIDVLGKRRTNNPLLVGEPGVGKT-AIVEGIAQRLLQS 322 Query: 361 HH----VQITDPAIVAAATLSHRYIAD--------RQLPDKAIDLIDEAASSIRMQIDSK 408 V+I ++VA +L + R+ + + IDE + + + Sbjct: 323 ARERVIVEIDMASVVAGTSLRGAFSEKLLGIQEEVRRAAGRVVVFIDEIHTLMGAGQAGE 382 Query: 409 PEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKAS 468 + + + + E + + + ++ ++ ER+++ + + + Sbjct: 383 GPQDAANELKAALGRGEFPCIGATTHDEYRQHIEK----DPALERRFTPVLVREPSVADT 438 Query: 469 LSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLR 528 ++ + + E+ + A +S +K + A + R Sbjct: 439 VTILRGLAPRYEKHHRVRFADGALEAAASLSARYVTDRFLPDKAVSALDLAGSRASRAGA 498 Query: 529 NKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSR 588 +V A++A +A+ GIP SR++ S+RE++L +E L RV+G +A+ V+ ++R+ Sbjct: 499 AEVDAADVARTVAKMAGIPESRLLASDRERILGLEVALRDRVVGHADAIARVAAVLKRNF 558 Query: 589 AGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVG 648 AG A RP+GSFLFLGPTGVGKTEL +ALA+ ++ + +A+V++DMSE E V+RLVG Sbjct: 559 AGFA-TRRPMGSFLFLGPTGVGKTELARALADALYGAPDALVQLDMSECAETTGVARLVG 617 Query: 649 APPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVD 708 A PGYVGY EGG LT+AVRRRP SV++LDE+EKAH DV +LLQVL++GRLTDG+GR VD Sbjct: 618 AAPGYVGYGEGGQLTDAVRRRPASVVVLDEIEKAHRDVQMLLLQVLEEGRLTDGRGRQVD 677 Query: 709 FRNTVVIMTSNLGSDLIQERFGEL-------DYAHMKELVLGVVSHNFRPEFINRIDEVV 761 F N VV++TSNLG++ + VL PE NR+DE V Sbjct: 678 FSNAVVVLTSNLGAEEATRTSTGAMGFGAAERVQPRTDRVLQAARGAVPPELWNRLDERV 737 Query: 762 VFHPLGEQHIASIAQIQLKRLYKRL-EERGYEIHISDEALKLLSEN-GYDPVYGARPLKR 819 F PL + +A +A++ + +RL ER +D A+ L EN G+D GARP++ Sbjct: 738 CFSPLSREDVAKVARLLVAGSSRRLEAERRIRFEATDGAIAHLVENGGFDAALGARPMRG 797 Query: 820 AIQQQIENPLAQQILSGELVPGKVIRLEVNEDR 852 AIQ+ +E PLA++IL+GEL PG V ++V+ Sbjct: 798 AIQRLVEAPLAERILAGELGPGDVAIVDVDAAG 830 >UniRef50_B8BXC6 Member of the clp superfamily, regulatory gamma subunit n=1 Tax=Thalassiosira pseudonana RepID=B8BXC6_THAPS Length = 890 Score = 377 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 187/591 (31%), Positives = 291/591 (49%), Gaps = 26/591 (4%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M +R++ + +L AQ+ + + + ++++ L S GI + Sbjct: 71 MIFERMSEECIGSLVTAQNESARLGQSTVGCEVMTLGIIDRPEK-ARRTLKSYGITLRKA 129 Query: 61 R---TDINQALNRLPQV-----EGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFV 112 + IN PQ+ + ++ + L RVL +A ++SE + Sbjct: 130 KLTVETINNIFTMSPQLLNMNKKARDVELPFAPALKRVLTFAGAIADSLDSPTVNSEHVL 189 Query: 113 LAALES-RGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQ--RQALKKYTIDLT 169 LA +E T + +I E M G G + L + +DLT Sbjct: 190 LALMEGVDSTTFSAAEFCRRLVMDIKYPNEPMVGEGPQLVSGNGGELSTPTLSEVGVDLT 249 Query: 170 ERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVP 229 + A + +LDPV GRDEE+R ++ L RR KNNP L+GEPGVGKTAI EG+AQ + P Sbjct: 250 DLAARMELDPVHGRDEEVRAALRTLVRRRKNNPCLMGEPGVGKTAIAEGVAQILAA---P 306 Query: 230 EGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLA-KQEGNVILFIDELHTMVGAGK 288 L+ R+++L++ LVAG KYRGEFEERL+ ++ ++ ++ ILFIDE+HT+VGAG Sbjct: 307 NMLRNHRIISLELANLVAGTKYRGEFEERLQAIVEEVTDERAPPTILFIDEIHTLVGAGS 366 Query: 289 ADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIA 348 A+G +DA NMLKPALARG+L +GATT+ EYR+YIEKDAALERR Q + V EP+++ T+ Sbjct: 367 AEGGIDAANMLKPALARGKLQVIGATTISEYRKYIEKDAALERRLQPLMVKEPTIDQTVQ 426 Query: 349 ILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSK 408 IL + E+Y HH V+ T ++VAAA LS RY+ DR LPDKAIDL+DEA +S+ ++ Sbjct: 427 ILEAIAEQYGAHHGVRYTPESLVAAAKLSERYVTDRFLPDKAIDLLDEAGASVHIEH--A 484 Query: 409 PEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKAS 468 + + + + + ++ K + L E + + + Sbjct: 485 FNPSGSTNTPEVTDQDISSIISQWTNIPIGKLTSTESSTLLTLESSLASRVKGQER---- 540 Query: 469 LSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLR 528 ++I + +A+ + A R L K L A K ++R Sbjct: 541 --AIKSIARAVRRARSGLRDAGRPVASFLFCGSTGVGKTWLAKSLAAQYYGSEKD--MVR 596 Query: 529 NKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDA 579 +++ +R TG P + E +L + H V+ +E A Sbjct: 597 IDMSEYMEKHTASRLTGPPPGYVGYEEGGQLTEAVRRAPHSVVLLDEIEKA 647 Score = 351 bits (900), Expect = 6e-95, Method: Composition-based stats. Identities = 210/815 (25%), Positives = 354/815 (43%), Gaps = 104/815 (12%) Query: 82 QPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAGATTANITQAIE 141 + S++ + L + + G + + E+ L ++ LK+ G T +E Sbjct: 75 RMSEECIGSLVTAQNESARLGQSTVGCEVMTLGIIDRPEKARRTLKSYGITLRKAKLTVE 134 Query: 142 QMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIR---RTIQVLQRRT 198 + +++ Q +++ ++A +L + L T Sbjct: 135 TINNIFTMSPQL------------LNMNKKARDVELPFAPALKRVLTFAGAIADSLDSPT 182 Query: 199 KNN--PVLIGEPGVGKTAIV-----EGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKY 251 N+ +L GV T L I P +G ++++ + G L Sbjct: 183 VNSEHVLLALMEGVDSTTFSAAEFCRRLVMDIKYPNEPMVGEGPQLVSGNGGEL------ 236 Query: 252 RGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCV 311 T+ G + A L P R E Sbjct: 237 ---------------------------STPTLSEVGVDLTDLAARMELDPVHGRDE---- 265 Query: 312 GATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIV 371 E R + R+ + EP V T AI G+ + + ++ + Sbjct: 266 ------EVRAALRTLVR-RRKNNPCLMGEPGVGKT-AIAEGVAQILAAPNMLRNHRIISL 317 Query: 372 AAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRL------DRRIIQLKLE 425 A L + ++ +++E +E+ L + I + Sbjct: 318 ELANLVAGTKYRGEFEERLQAIVEEVTDERAPPTILFIDEIHTLVGAGSAEGGIDAANML 377 Query: 426 QQALMKESDEASKK----RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQ 481 + AL + + E+ + ER+ L + ++ + I + Sbjct: 378 KPALARGKLQVIGATTISEYRKYIEKDAALERRLQPLMVKEPTIDQTVQILEAIAEQYGA 437 Query: 482 AK------IAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLR---NKVT 532 ++ A ++ + K +L + A+ +E +VT Sbjct: 438 HHGVRYTPESLVAAAKLSERYVTDRFLPDKAIDLLDEAGASVHIEHAFNPSGSTNTPEVT 497 Query: 533 DAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLA 592 D +I+ ++++WT IP+ ++ +E LL +E L RV GQ A+ +++ A+RR+R+GL Sbjct: 498 DQDISSIISQWTNIPIGKLTSTESSTLLTLESSLASRVKGQERAIKSIARAVRRARSGLR 557 Query: 593 DPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPG 652 D RP+ SFLF G TGVGKT L K+LA + S++ MVRIDMSE+MEKH+ SRL G PPG Sbjct: 558 DAGRPVASFLFCGSTGVGKTWLAKSLAAQYYGSEKDMVRIDMSEYMEKHTASRLTGPPPG 617 Query: 653 YVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNT 712 YVGYEEGG LTEAVRR P+SV+LLDE+EKAH DV N+LLQV++DG LTDG+GRT+ F+N Sbjct: 618 YVGYEEGGQLTEAVRRAPHSVVLLDEIEKAHRDVLNVLLQVMEDGVLTDGKGRTICFKNV 677 Query: 713 VVIMTSNLGSDLIQERFGE---------------LDYAHMKELVLGVVSHNFRPEFINRI 757 +++MTSN+GS I E DYA + E+V ++ +PE +NRI Sbjct: 678 ILVMTSNVGSAKIMELVNGDAGEFDSDTTSLDAAEDYAALSEVVQEELTKEMKPELLNRI 737 Query: 758 DEVVVFHPLGEQHIASIAQIQLK-RLYKRLEERGYEIHISDEALKLLSENGY--DPVYGA 814 DE++VF PLG++++ IA+ + + + +ER + SD + + +G +GA Sbjct: 738 DEIIVFSPLGDENLRDIAKAIVDASIERAFKERSITLSASDSLIDAVVMDGSMNAAEFGA 797 Query: 815 RPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVN 849 RP++RA Q+ E+ ++ I+ G L +++ Sbjct: 798 RPMRRAAQRLFEDAVSDAIVRGFLQEDDHATVDMG 832 >UniRef50_B8J0Q4 ATP-dependent Clp protease, ATP-binding subunit clpA n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J0Q4_DESDA Length = 832 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 174/586 (29%), Positives = 288/586 (49%), Gaps = 17/586 (2%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 L+ Q + DA A + + H++ AL N G + LL +G + LR + Sbjct: 2 LSKSVQSVIRDALMEAHRRRHDMLTVEHVLYALTNSMRGRI--LLEGSGASVAVLREQLE 59 Query: 66 QALNRLPQVEGTGG--DVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLA 123 NR +V G +V ++ + RVL + G + + +++ ++ + A Sbjct: 60 DFFNRELEVVPLAGKHEVAQTEGVQRVLERALGHIRAAGRDTVELGDLLISIMDEEESYA 119 Query: 124 DI-LKAAGATTANITQAIEQMRG--------GESVNDQGAEDQRQALKKYTIDLTERAEQ 174 L+ G ++ + + + + + L +Y +DLT RA + Sbjct: 120 HYYLRKQGVERLDVLTFVSHGMDEGGGSRGVDQGGEGEEKDAKADPLAQYAVDLTARARE 179 Query: 175 GKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKG 234 GK+DP++GR+ E+ R ++VL RR KNNP+ +G+PGVGKTA+ EGLA RI+ +VPE Sbjct: 180 GKIDPLVGRENELDRAVEVLCRRRKNNPLFVGDPGVGKTALAEGLALRIVEDDVPEMFSN 239 Query: 235 RRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGK-ADGAM 293 ++ ALDMG L+AG +YRG+FE RLK V+ L + ILFIDE+HT+VGAG + G+M Sbjct: 240 AKLFALDMGLLLAGTRYRGDFESRLKAVVQRLKELP-EAILFIDEIHTIVGAGSTSGGSM 298 Query: 294 DAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGL 353 DA N+LKP LA GEL C+G+TT +E+R + EKD AL RRFQ++ + EPS E+ +AIL+GL Sbjct: 299 DASNLLKPVLASGELRCIGSTTYEEFRNHFEKDRALARRFQRIDLTEPSPEECLAILQGL 358 Query: 354 KERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELD 413 ++RY H V+ + A+ A L+ R++ DR LPDKAID++DE+ +++R+ + Sbjct: 359 EKRYADFHKVRYSTAAVKAMVDLTARHVRDRLLPDKAIDVMDESGAAVRLGRGVQGARAS 418 Query: 414 RLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQ 473 + + K + E R+ + + + + L Q Sbjct: 419 SGKKAVASGKKLPPLVSVGDVERIVARMAGIPVRTVSGTER--NRLASLEKDLKELVFGQ 476 Query: 474 TIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTD 533 EL I +A + + + K A + + + LR +++ Sbjct: 477 DAAIELTVRAILRARAGLGQEQRPAGAFLFYGPTGVGKTEVARSLAKLMGVEFLRYDMSE 536 Query: 534 AEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDA 579 ++R G P + + L ++ + V+ +E A Sbjct: 537 YMEKHAVSRLIGAPPGYVGFDQGGLLTEAVRKAPYSVVLLDEVEKA 582 Score = 339 bits (869), Expect = 3e-91, Method: Composition-based stats. Identities = 215/813 (26%), Positives = 353/813 (43%), Gaps = 98/813 (12%) Query: 83 PSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAGATTANITQAIEQ 142 S+ + V+ A +R + ++ E + A + +L+ +GA+ A + + +E Sbjct: 2 LSKSVQSVIRDALMEAHRRRHDMLTVEHVLYAL-TNSMRGRILLEGSGASVAVLREQLED 60 Query: 143 MRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNP 202 E A + ++ G + R + + R + Sbjct: 61 FFNRELEVVP------------------LAGKHEVAQTEGVQRVLERALGHI-RAAGRDT 101 Query: 203 VLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLA--LDMGALVAGAKYRGEFEERLK 260 V +G+ + E A + + E L ++ +D G G GE EE+ Sbjct: 102 VELGDLLISIMDEEESYAHYYLRKQGVERLDVLTFVSHGMDEGGGSRGVDQGGEGEEK-D 160 Query: 261 GVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYR 320 + LA+ + + A +G +D P + R +E Sbjct: 161 AKADPLAQYAVD-----------LTARAREGKID------PLVGR----------ENELD 193 Query: 321 QYIEKDAALERRF--QKVFVAEPSVEDT-------IAILRGLKERYELHHHVQITDPAIV 371 + +E L RR +FV +P V T + I+ + + D ++ Sbjct: 194 RAVEV---LCRRRKNNPLFVGDPGVGKTALAEGLALRIVEDDVPEMFSNAKLFALDMGLL 250 Query: 372 AAATLSHRYIADRQLPDKA-----------IDLIDEAASSIRMQIDSKPEELDRLDRRII 420 A RY D + KA I IDE + + S + + Sbjct: 251 LA---GTRYRGDFESRLKAVVQRLKELPEAILFIDEIHTIVGAGSTSGGSMDASNLLKPV 307 Query: 421 QLKLEQQALMKESDEASKKRLDMLN------EELSDKERQYSELEEEWKAEKASLSGTQT 474 E + + + E + + + + E E + + + Sbjct: 308 LASGELRCIGSTTYEEFRNHFEKDRALARRFQRIDLTEPSPEECLAILQGLEKRYADFHK 367 Query: 475 IKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGK----------TM 524 ++ K ++ R + + + E + ++G + Sbjct: 368 VRYSTAAVKAMVDLTARHVRDRLLPDKAIDVMDESGAAVRLGRGVQGARASSGKKAVASG 427 Query: 525 RLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAI 584 + L V+ ++ ++AR GIPV + +ER +L +E++L V GQ+ A++ AI Sbjct: 428 KKLPPLVSVGDVERIVARMAGIPVRTVSGTERNRLASLEKDLKELVFGQDAAIELTVRAI 487 Query: 585 RRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVS 644 R+RAGL RP G+FLF GPTGVGKTE+ ++LA M +R DMSE+MEKH+VS Sbjct: 488 LRARAGLGQEQRPAGAFLFYGPTGVGKTEVARSLAKLM---GVEFLRYDMSEYMEKHAVS 544 Query: 645 RLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQG 704 RL+GAPPGYVG+++GG LTEAVR+ PYSV+LLDEVEKAHPD+FN+LLQV+D LTD G Sbjct: 545 RLIGAPPGYVGFDQGGLLTEAVRKAPYSVVLLDEVEKAHPDIFNVLLQVMDYATLTDNTG 604 Query: 705 RTVDFRNTVVIMTSNLGSDLIQE---RFGELDYAHMKELVLGVVSHNFRPEFINRIDEVV 761 R DF + V+IMTSN G+ + FG L V + F PEF NR+D +V Sbjct: 605 RKTDFSHVVLIMTSNAGAFDMSRPAMGFGGATRQDAAHKGLKAVENTFSPEFRNRLDALV 664 Query: 762 VFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAI 821 F L E + I + + + LE+R + + +A + L+ G+DP GARPL+R + Sbjct: 665 PFGSLTEDMMLRIVDKFMAEIIESLEQRQVSLELGQKARQWLARKGFDPTMGARPLRRLL 724 Query: 822 QQQIENPLAQQILSGELVPGKVIRLEVNEDRIV 854 + ++E+ LA ++L G L G RL++ +D +V Sbjct: 725 RTELEDRLAHELLFGSLAKGGTARLDLVDDALV 757 >UniRef50_Q0E0M6 Os02g0537400 protein n=2 Tax=Poaceae RepID=Q0E0M6_ORYSJ Length = 388 Score = 371 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 160/323 (49%), Positives = 230/323 (71%), Gaps = 1/323 (0%) Query: 531 VTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590 V +A+V++RWTGIPV+ + + E+EKL+ + LH RV+GQ+EAV V+ A+ RSRAG Sbjct: 18 VGPDHVAQVVSRWTGIPVTTLDQEEKEKLIHLADRLHERVVGQDEAVKLVAQAVLRSRAG 77 Query: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAP 650 L P +PIGSFLFLG TGVGKTEL KALA +FDS++ ++R DMSEF+ SV RL+GAP Sbjct: 78 LEQPGQPIGSFLFLGSTGVGKTELAKALAEQLFDSEKMLIRFDMSEFVGSGSVLRLIGAP 137 Query: 651 PGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFR 710 P Y G+++GG LTE VR RPYSVIL DEVEKA P VFN+ LQ+LDDG LTDG+GRTVDF+ Sbjct: 138 PSYHGHQDGGQLTEKVRTRPYSVILFDEVEKADPSVFNVFLQLLDDGMLTDGKGRTVDFK 197 Query: 711 NTVVIMTSNLGSDLIQER-FGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQ 769 NT++IMTSNLG++ + E GE ++LV+ V FRPE +NR+ E+V+F PL Sbjct: 198 NTIIIMTSNLGAEHLTEGVTGERTMEAARDLVMKQVQKYFRPELLNRLSEIVIFEPLSHD 257 Query: 770 HIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPL 829 ++ + +IQ+K + + +G + SD+AL ++ Y+P+YGARP++R +Q+ + L Sbjct: 258 NLKEVVKIQMKSVVTSVAHKGVSLLASDDALDVILSESYNPMYGARPVRRWVQKNVMTKL 317 Query: 830 AQQILSGELVPGKVIRLEVNEDR 852 ++ +++G+ G I ++ +D+ Sbjct: 318 SEMLITGDAGQGSTISIDATDDK 340 >UniRef50_A6QBZ7 ATP-dependent Clp protease, ATP-binding subunit ClpA n=3 Tax=Epsilonproteobacteria RepID=A6QBZ7_SULNB Length = 729 Score = 371 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 186/575 (32%), Positives = 289/575 (50%), Gaps = 30/575 (5%) Query: 10 FQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQALN 69 +A A + ++++ H+ +++ E G +L++ N L I + ++ Sbjct: 6 LNDVFKNAVKYAKENRHEYLTVEHVFLSVVRSEEGI--EILSTLDANLEILEEGIVEHIH 63 Query: 70 RLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADIL-KA 128 + + + L R +N G S + A + A L K Sbjct: 64 KTIPSLKEAVEPFETVALSRAINDMMTHIHSAGRTEASIGDMLAAIFMQEHSYAVYLMKK 123 Query: 129 AGATTANITQAIEQMRGGE-SVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEI 187 G +I + I R + + L+++T++L A+ GK+DPV+GR +EI Sbjct: 124 EGIARVDILEVISHNREDHAQTETDKSAKEETVLEQFTMELVALAKTGKIDPVVGRVDEI 183 Query: 188 RRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVA 247 R +Q L RR KNNP+L+GEPGVGKTAI EGLA +I G+VP+ +K +V ALDMGAL+A Sbjct: 184 NRVMQTLCRRKKNNPLLVGEPGVGKTAIAEGLALKISEGDVPDVIKDAKVYALDMGALIA 243 Query: 248 GAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGK-ADGAMDAGNMLKPALARG 306 G KYRG+FE+RLKG++N+L++ + + ILFIDE+HTMVGAG + G+MDA N+LKPALARG Sbjct: 244 GTKYRGDFEKRLKGIINELSQMD-DAILFIDEIHTMVGAGATSGGSMDASNLLKPALARG 302 Query: 307 ELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQIT 366 +L C+GATT EYR + +KD AL RRF K+ V EPSVEDT IL+G++ +YE HH+++ T Sbjct: 303 DLKCIGATTYAEYRNFFDKDKALSRRFAKIDVEEPSVEDTFTILKGVQHKYEDHHNIKFT 362 Query: 367 DPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDS--KPEELDRLDRRIIQLKL 424 D A+ +A LS +Y+ DR LPDKA+D+IDE + ++ + D + +KL Sbjct: 363 DEALQSAIDLSVKYLHDRFLPDKAMDIIDEVGAHFMLKGAEGVIVKPKDIEESVAKMMKL 422 Query: 425 EQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKI 484 + + + K L+ + + EL K A L+ Sbjct: 423 PSTVIGTDDTKKLKTLEKDLSAHIIGQNEAIEELATAIKRSYAGLNAPNRP--------- 473 Query: 485 AIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWT 544 + + + K A E + R +++ A ++R Sbjct: 474 -------------IGSFLFVGPTGVGKTALATQLAETMHVHFERIDMSEYMEAHTISRLV 520 Query: 545 GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDA 579 G P + + L M ++ H V+ +E A Sbjct: 521 GAPPGYVGYEQGGLLTEMIKKHPHTVLLLDEIEKA 555 Score = 332 bits (851), Expect = 3e-89, Method: Composition-based stats. Identities = 209/795 (26%), Positives = 347/795 (43%), Gaps = 93/795 (11%) Query: 83 PSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAGATTANITQAIEQ 142 S L V K A++ +++ E L+ + S + +IL A + + I + Sbjct: 2 ISIALNDVFKNAVKYAKENRHEYLTVEHVFLSVVRSEEGI-EILSTLDANLEILEEGIVE 60 Query: 143 MRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNP 202 + + A + + + L R + Sbjct: 61 HIHKTIPSLKEAVEPFETV-------------------------------ALSRAINDMM 89 Query: 203 VLIGEPGVGKTAIVEGLAQRIINGEVPEG--LKGRRVLALDMGALVAGAKYRGEFEERLK 260 I G + +I + LA + +K + +D+ +++ + E+ + Sbjct: 90 THIHSAGRTEASIGDMLAAIFMQEHSYAVYLMKKEGIARVDILEVISHNR-----EDHAQ 144 Query: 261 GVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYR 320 + AK+E + F EL + GK + P + R Sbjct: 145 TETDKSAKEETVLEQFTMELVALAKTGK----------IDPVVGR-------------VD 181 Query: 321 QYIEKDAALERRF--QKVFVAEPSVEDT-------IAILRGLKERYELHHHVQITDP-AI 370 + L RR + V EP V T + I G V D A+ Sbjct: 182 EINRVMQTLCRRKKNNPLLVGEPGVGKTAIAEGLALKISEGDVPDVIKDAKVYALDMGAL 241 Query: 371 VAAATLSHRY-------IADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLK 423 +A + I + D AI IDE + + S + + Sbjct: 242 IAGTKYRGDFEKRLKGIINELSQMDDAILFIDEIHTMVGAGATSGGSMDASNLLKPALAR 301 Query: 424 LEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAK 483 + + + + A + ++ LS + + E + L G Q + K Sbjct: 302 GDLKCI-GATTYAEYRNFFDKDKALSRRFAKIDVEEPSVEDTFTILKGVQHKYEDHHNIK 360 Query: 484 IAIEQARRVGDL---ARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVL 540 E + DL K ++ ++ A L+G +++ K +I E + Sbjct: 361 FTDEALQSAIDLSVKYLHDRFLPDKAMDIIDEVGAHFMLKGAEGVIVKPK----DIEESV 416 Query: 541 ARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGS 600 A+ +P + + + +KL +E++L +IGQNEA++ ++ AI+RS AGL PNRPIGS Sbjct: 417 AKMMKLPSTVIGTDDTKKLKTLEKDLSAHIIGQNEAIEELATAIKRSYAGLNAPNRPIGS 476 Query: 601 FLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG 660 FLF+GPTGVGKT L LA M RIDMSE+ME H++SRLVGAPPGYVGYE+GG Sbjct: 477 FLFVGPTGVGKTALATQLAETMH---VHFERIDMSEYMEAHTISRLVGAPPGYVGYEQGG 533 Query: 661 YLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL 720 LTE +++ P++V+LLDE+EKAHPD+ NILLQV+D +LTD G DF+N ++IMTSN+ Sbjct: 534 LLTEMIKKHPHTVLLLDEIEKAHPDIMNILLQVMDGAKLTDNNGVVSDFKNVILIMTSNI 593 Query: 721 GSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLK 780 G+ D + + + F PEF+NR+ VV F+ L + + SI ++L Sbjct: 594 GTKEANVMGFNKDNSMKTDK---ALKAFFAPEFMNRLSAVVEFNTLDLETLVSIVDVELD 650 Query: 781 RLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVP 840 +L L+ + ++ +S +A + L+ GYD YGAR + R I ++I+ L ++IL G L Sbjct: 651 KLNLMLKPKNIKVKVSKKAKEYLANEGYDERYGARHIARVIDEKIKEALTEEILFGRLKK 710 Query: 841 GKVIRLEVNEDRIVA 855 G ++++ + ++ Sbjct: 711 GGLVKVGLKNGKLTF 725 >UniRef50_A4S065 Chaperone, Hsp100 family, ClpC-type n=4 Tax=Mamiellales RepID=A4S065_OSTLU Length = 781 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 239/786 (30%), Positives = 358/786 (45%), Gaps = 90/786 (11%) Query: 96 KLAQKRGDNFISSELFVLAALESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAE 155 LA+K SE +LA +R + L G T +A+ + G + Sbjct: 2 DLAKKFRSAECGSEHVLLALTRNRDRTSKALHKHGVTEEATRRALGERAGVSELELMNPF 61 Query: 156 DQRQA--LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKT 213 ++ A L + +L + E+ +E+ + I EP G Sbjct: 62 NKPSAEGLLALSDELKKVFERASASGSEVGSKELALAM-------------IDEPASGAR 108 Query: 214 AIVEGLAQRIINGEVPEGLKGRRVLALDMGALV-AGAKYRGEFEERLKGVLNDLAKQEGN 272 A + L G + L+ + + + LV AG K R ++ L DL + Sbjct: 109 ATMAAL-----EGCDLKVLR-KEITGANERELVGAGKKTRNTKKQTLADCSIDLTAEARE 162 Query: 273 VILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERR 332 L P L R E E + + L RR Sbjct: 163 GK------------------------LDPVLGRDE----------EVTRVMR---ILVRR 185 Query: 333 --FQKVFVAEPSVEDTIAILRGLK---------ERYELHHHVQITDPAIVAAATLSHRY- 380 V EP V T AI GL E + V + ++A + Sbjct: 186 RKSNPCLVGEPGVGKT-AIAEGLAMMIAKGDVPESLKEKRVVSLQIGLLLADTKYRGEFE 244 Query: 381 ------IADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESD 434 + + + I +DE + + +D + L + + + Sbjct: 245 EKMKNVMEEVKQAGDIILFVDEIHMLVGAGGTGEDGGMDAGNLMKPALARGELQCIGATT 304 Query: 435 EASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQ---ARR 491 ++ + L + + +E + L G + E E A Sbjct: 305 IDEYRKHIEKDAALERRFQPVRVIEPSPEQTLTILRGLKDTYQEHHGVSFTDEALRAAVS 364 Query: 492 VGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRM 551 + K ++ + A QL L V ++ I EV+A+WTG+PV ++ Sbjct: 365 LSTRYINDRFLPDKAIDVIDEAGALVQLTPGDSTL----VDESHITEVVAQWTGVPVQQL 420 Query: 552 MESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGK 611 E L+ EQEL RVIGQ EAV ++S AIRR+RAGLAD ++P+ S +F GPTGVGK Sbjct: 421 SADESLSLMNFEQELGKRVIGQVEAVRSISQAIRRARAGLADASKPVASIIFSGPTGVGK 480 Query: 612 TELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPY 671 TEL KA+A F +++AMVRIDMSE+ME HSVSRL+G PPGY+G+ EGG LTEAVR P+ Sbjct: 481 TELAKAVAQTYFGAEKAMVRIDMSEYMESHSVSRLIGPPPGYIGFGEGGQLTEAVRTNPH 540 Query: 672 SVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERF-- 729 S++LLDE+EKAHPDVFNILLQVL+DGRLTD +GRTVDF N +++MTSN+GS I E Sbjct: 541 SLVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFTNAMLVMTSNIGSREILESMSG 600 Query: 730 ---GELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRL 786 E Y ++ V + +RPEF+NR+DE+++F PL +++IA + L + KR Sbjct: 601 EGEDEEKYKKLQTQVKRELGKEYRPEFLNRLDEIIIFRPLERPEVSAIADLMLASVSKRA 660 Query: 787 EERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRL 846 RG + +D LL NG+ P +GARP++R ++ +EN LA+ +L G G + Sbjct: 661 LARGITLDFTDSFKSLLYSNGFSPRFGARPMRRCVRGLLENNLAECMLDGFASSGDTVNF 720 Query: 847 EVNEDR 852 + ++D+ Sbjct: 721 DYDDDQ 726 Score = 354 bits (909), Expect = 6e-96, Method: Composition-based stats. Identities = 189/574 (32%), Positives = 281/574 (48%), Gaps = 37/574 (6%) Query: 19 SLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDI-------NQALNRL 71 LA + H++ AL S L G+ R + L Sbjct: 2 DLAKKFRSAECGSEHVLLALTRNRD-RTSKALHKHGVTEEATRRALGERAGVSELELMNP 60 Query: 72 PQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADI----LK 127 G + S +L +V + G LA ++ + A L+ Sbjct: 61 FNKPSAEGLLALSDELKKVFERASASGSEVGSKE-----LALAMIDEPASGARATMAALE 115 Query: 128 AAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEI 187 R + ++Q L +IDLT A +GKLDPV+GRDEE+ Sbjct: 116 GCDLKVLRKEITGANERELVGAGKKTRNTKKQTLADCSIDLTAEAREGKLDPVLGRDEEV 175 Query: 188 RRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVA 247 R +++L RR K+NP L+GEPGVGKTAI EGLA I G+VPE LK +RV++L +G L+A Sbjct: 176 TRVMRILVRRRKSNPCLVGEPGVGKTAIAEGLAMMIAKGDVPESLKEKRVVSLQIGLLLA 235 Query: 248 GAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGA--MDAGNMLKPALAR 305 KYRGEFEE++K V+ ++ + G++ILF+DE+H +VGAG MDAGN++KPALAR Sbjct: 236 DTKYRGEFEEKMKNVMEEVKQA-GDIILFVDEIHMLVGAGGTGEDGGMDAGNLMKPALAR 294 Query: 306 GELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQI 365 GEL C+GATT+DEYR++IEKDAALERRFQ V V EPS E T+ ILRGLK+ Y+ HH V Sbjct: 295 GELQCIGATTIDEYRKHIEKDAALERRFQPVRVIEPSPEQTLTILRGLKDTYQEHHGVSF 354 Query: 366 TDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLE 425 TD A+ AA +LS RYI DR LPDKAID+IDEA + +++ + + Sbjct: 355 TDEALRAAVSLSTRYINDRFLPDKAIDVIDEAGALVQLTPGDSTLVDES--------HIT 406 Query: 426 QQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIA 485 + + D ++ ++ + + +A ++ + +A L Sbjct: 407 EVVAQWTGVPVQQLSADESLSLMNFEQELGKRVIGQVEAVRSISQAIRRARAGL------ 460 Query: 486 IEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTG 545 + ++ V + GK EL K + K ++R +++ + ++R G Sbjct: 461 ADASKPVASIIFSGPTGVGK-TELAKAVAQTYFGAEKA--MVRIDMSEYMESHSVSRLIG 517 Query: 546 IPVSRMMESEREKLLRMEQELHHRVIGQNEAVDA 579 P + E +L + H ++ +E A Sbjct: 518 PPPGYIGFGEGGQLTEAVRTNPHSLVLLDEIEKA 551 >UniRef50_UPI0001C372BC ATPase n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C372BC Length = 750 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 163/560 (29%), Positives = 275/560 (49%), Gaps = 22/560 (3%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M D+ + + A ++A + F+ HL+ ++ + + + +L G+ L Sbjct: 1 MNTDKFAKRSVKIIEGAVAIASQMGHTFVGSEHLLLSIAKEGNSAAADILIDNGLTYDDL 60 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG 120 ++ + + + + T + + R+L + E + A + Sbjct: 61 QSAVVRMIGKG--TPSTLSSRYFTASVKRILENAASGGTIPKRRQATPENILSAVINDTS 118 Query: 121 TLADILK-AAGATTANITQAIEQMR----GGESVNDQGAEDQRQALKKYTIDLTERAEQG 175 A L +AG I ++++ + Q L +Y +T+ Q Sbjct: 119 CTARKLIVSAGGDIRGICESLDVNFRLDDDELYSSCAPKRSQFPHLFRYGRHITDSNVQA 178 Query: 176 KLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGR 235 K DP+IGR+ E+++ + L RRTK+NP LIGE GVGKTAIV+G+A I+G+VPE L+ + Sbjct: 179 KRDPLIGREAEVQQVLMTLSRRTKSNPCLIGEAGVGKTAIVDGVAGLFISGDVPEALRNK 238 Query: 236 RVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDA 295 + ALD+ AL++GAKYRG+FEERL+G + + + GN+ILFIDE+HT+VGAG A+GA+DA Sbjct: 239 YIFALDLTALISGAKYRGDFEERLRGCIEEASSS-GNIILFIDEIHTIVGAGAAEGAIDA 297 Query: 296 GNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKE 355 N++KP LAR EL +GATT DEYR+ IEKD ALERRFQ V V EPSV + + +++G++ Sbjct: 298 ANIMKPQLARSELQVIGATTFDEYRKTIEKDKALERRFQPVTVNEPSVGECVEMIKGIRT 357 Query: 356 RYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRL 415 YE +H+V I+D A + S R+I DR LPDKAID +DEA ++ ++ + Sbjct: 358 AYEKYHNVIISDEAAEFSVRTSARFINDRFLPDKAIDTLDEACAAAAIRNR------ENC 411 Query: 416 DRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTI 475 + I + ++ + + E+ + + + + Sbjct: 412 RKYEISCGDIAHVISLKTGIPESSITAFSDCRAAGIEKLLTRRITGHR------DIIRKV 465 Query: 476 KAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAE 535 + ++ ++ +RR + + + E A G + +R +++ Sbjct: 466 AEAVYRSDSGLKDSRRPAASFLFA--GPTGVGKTELAKALAEAAFGSSGSFIRIDMSEFM 523 Query: 536 IAEVLARWTGIPVSRMMESE 555 + + G P SE Sbjct: 524 EKSSITKLIGAPPGYAGYSE 543 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 154/486 (31%), Positives = 240/486 (49%), Gaps = 14/486 (2%) Query: 381 IADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKR 440 I + I IDE + + + + + + E Q + + + +K Sbjct: 266 IEEASSSGNIILFIDEIHTIVGAGAAEGAIDAANI-MKPQLARSELQVIGATTFDEYRKT 324 Query: 441 LDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSE 500 ++ ER++ + + + + I+ E+ I R S Sbjct: 325 IEKDKA----LERRFQPVTVNEPSVGECVEMIKGIRTAYEKYHNVIISDEAAEFSVRTSA 380 Query: 501 LQYGKIPELEKQLEAATQLEGKTMRLLRN-----KVTDAEIAEVLARWTGIPVSRMMESE 555 +K ++ + R +++ +IA V++ TGIP S + Sbjct: 381 RFINDRFLPDKAIDTLDEACAAAAIRNRENCRKYEISCGDIAHVISLKTGIPESSITAFS 440 Query: 556 REKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELC 615 + +E+ L R+ G + + V+ A+ RS +GL D RP SFLF GPTGVGKTEL Sbjct: 441 DCRAAGIEKLLTRRITGHRDIIRKVAEAVYRSDSGLKDSRRPAASFLFAGPTGVGKTELA 500 Query: 616 KALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGY-LTEAVRRRPYSVI 674 KALA F S + +RIDMSEFMEK S+++L+GAPPGY GY EG L E VRR PYS++ Sbjct: 501 KALAEAAFGSSGSFIRIDMSEFMEKSSITKLIGAPPGYAGYSEGRSNLCEQVRRHPYSLV 560 Query: 675 LLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQ---ERFGE 731 L DE+EKA +V N+LLQ+LD+G +TD + + FR+ +IMTSN+G+DL+ Sbjct: 561 LFDEIEKADTEVLNLLLQILDEGVITDSEMHKISFRSCFIIMTSNIGADLVTGNSSMGFG 620 Query: 732 LDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGY 791 + E V + F PEFINRIDE+ VF L + I + L L +R + G Sbjct: 621 SSAETVNERVTDRIRQYFSPEFINRIDEIAVFGKLNSCDLLGITRNLLSDLKRRSQSIGI 680 Query: 792 EIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNED 851 + S++ +++ S YGARP++R I IEN LAQ I++ E+ G +R++ + Sbjct: 681 TVEYSEKTVEIFSRTKDTDRYGARPIRRRITDMIENKLAQMIVNREVAKGDSVRVDTSNG 740 Query: 852 RIVAVQ 857 I+ + Sbjct: 741 EIMITK 746 >UniRef50_A3K6L5 ATP-dependent Clp protease, ATP-binding subunit ClpB (Fragment) n=1 Tax=Sagittula stellata E-37 RepID=A3K6L5_9RHOB Length = 637 Score = 367 bits (942), Expect = 1e-99, Method: Composition-based stats. Identities = 193/635 (30%), Positives = 315/635 (49%), Gaps = 40/635 (6%) Query: 257 ERLKGVLNDLAK---QEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGA 313 R+ L + + N +L ID+ + A + +G N + + G C+ Sbjct: 5 ARISEGFEKLRRTLLRTANSVLLIDDFRDFIEAARNNGTTHLINAVMRDVLTGRYQCILE 64 Query: 314 TTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAA 373 ++ ++ + + F + + EP + I R HH V +T+ AI AA Sbjct: 65 ARDEDLEIVLKCHSNMREVFTLLEIREPDPDALKEIALVGAGRLTAHHGVPVTEQAIAAA 124 Query: 374 ATLSHRYIAD-----RQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQA 428 L+ +Y R P++ ++LID A +S R + +P L RL + +++ A Sbjct: 125 IDLTSKYHVGDLSLSRAQPERTLNLIDRALTSYRQTVHRRPPHLARLRATLAEIEALPDA 184 Query: 429 LMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLS---------------GTQ 473 + D L L+ E ++ + A + + Q Sbjct: 185 ARSADIVRQR---DELQGMLATAETDWAAKTDRLTALRNAQRSGEELLLALEEQLSGERQ 241 Query: 474 TIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTD 533 +AE + A + R+ A + +I + +Q A + L+ ++ Sbjct: 242 KERAEAAPTEAAPTFSARLSGGAGFGSREENRILQEIRQATTAIADNKRAFDTLQEEMNA 301 Query: 534 AEIAEV------LARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRS 587 + +GIP ++ + EREKLL ++Q L RV GQ+ AV+ + A+ + Sbjct: 302 GLALGAAAVTLEFSAISGIPAEKLNQDEREKLLTLDQTLKARVYGQDHAVEKLVGAVLMA 361 Query: 588 RAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLV 647 AGL +P++P GSF+F GP+GVGKTE+ K LA + D+++AM+R DMSE+MEKH++++L+ Sbjct: 362 NAGLKEPDKPQGSFMFCGPSGVGKTEIAKTLAMALKDNEKAMLRFDMSEYMEKHALAKLI 421 Query: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTV 707 GAPPGY GYE GG LT AVRR P+S+IL DE+EKAHPDVFN+ LQVLDDGRLTD +G TV Sbjct: 422 GAPPGYEGYEAGGILTNAVRRNPHSIILFDEIEKAHPDVFNVFLQVLDDGRLTDNRGLTV 481 Query: 708 DFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRID---EVVVFH 764 F NT+++MT+N+G +L +A E + + FRPEF+NR + ++ F Sbjct: 482 SFANTLILMTTNIGQAHFLN--ADLQFAAAMEETMRDLEGTFRPEFLNRFNGRQNIIGFR 539 Query: 765 PLGEQHIASIAQIQLKRLYKRLEERG--YEIHISDEALKLLSENGYDPVYGARPLKRAIQ 822 L + I IA +L+++ R+ G I ++ E + L + YDPV+GAR + Sbjct: 540 TLPLELIEKIANRELRKVNARIRAAGHAVTIAMAPEQVSALCADRYDPVHGARGIPGFFA 599 Query: 823 QQIENPLAQQILSGELVPGKV-IRLEVNEDRIVAV 856 ++ +A+ ILS G + +R ++ V + Sbjct: 600 AEVYPSIARTILSAPETAGTLDVRYHADDGGRVEI 634 >UniRef50_A8EW19 ATP-dependent Clp protease, ATP-binding subunit n=5 Tax=Campylobacterales RepID=A8EW19_ARCB4 Length = 737 Score = 367 bits (941), Expect = 1e-99, Method: Composition-based stats. Identities = 181/578 (31%), Positives = 288/578 (49%), Gaps = 20/578 (3%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 ++ + + A A S A ++++ H+ L+N + + L G++ L ++ Sbjct: 2 ISKELRHIFAQAVSYAKSSKHEYLTVEHVFLMLINDQT--IENLFIDLGVDTNILFNELK 59 Query: 66 QALNRLPQVEGTG--GDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLA 123 ++ + + + L ++ Q G + E +A L+ + + Sbjct: 60 SYIDENTPLLPNDANDEPIETVSLSSTIDYMVSHTQSSGKTNANVEDMFVAILKDEKSYS 119 Query: 124 -DILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIG 182 +LK G +I + I E ND+ + + + L K + +L A++G++DPVIG Sbjct: 120 TYLLKKYGIQRVDILEEISHKDEDEQKNDENS-ENEKVLDKNSSELVSIAKKGEIDPVIG 178 Query: 183 RDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDM 242 RD EI R I++L RR KNNP+L+GEPGVGKTAI EGLA +I +VPE L +V +LDM Sbjct: 179 RDREISRVIEILSRRKKNNPILVGEPGVGKTAIAEGLALQIAQKKVPEFLLDSKVFSLDM 238 Query: 243 GALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGA-MDAGNMLKP 301 G+++AG KYRG+FE++LK +L +++K + N ILFIDE+HT+VGAG G+ MDA N+LKP Sbjct: 239 GSMIAGTKYRGDFEKKLKSLLKEVSKIK-NAILFIDEIHTIVGAGSVGGSAMDASNILKP 297 Query: 302 ALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHH 361 LA G+L C+GATT E+R KD AL RRF KV V EPS+ED+I IL GLK +YE +H Sbjct: 298 MLANGKLRCIGATTFSEFRNDFSKDKALSRRFAKVDVEEPSIEDSILILEGLKSKYEEYH 357 Query: 362 HVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQ 421 V+ + AI +A LS +YI DR LPD AID+IDE ++ ++ + + + + I Sbjct: 358 GVKYSKSAIQSAVELSKKYITDRFLPDCAIDVIDEVGAAKKISLATTLKTKAESNITITS 417 Query: 422 LKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQ 481 +E+ L+ + ++ + + A + + KA L Sbjct: 418 KDVEEIISKMAHIPPKSATKTDLSLLKNLEKNMQKRVFGQDTAISTIVQAIKRNKAGLGL 477 Query: 482 AKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLA 541 K I G + K A + R +++ A ++ Sbjct: 478 DKKPIGSFLFTGPTG------------VGKTEVARELSLQMGIHFERFDMSEYMEAHTVS 525 Query: 542 RWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDA 579 R G P + + L ++ H V+ +E A Sbjct: 526 RLIGAPAGYVGFEQGGLLTEAIRKHPHTVLLLDEIEKA 563 Score = 321 bits (823), Expect = 6e-86, Method: Composition-based stats. Identities = 198/793 (24%), Positives = 345/793 (43%), Gaps = 89/793 (11%) Query: 83 PSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAGATTANITQAIEQ 142 S++L + A+ +++ E L L + T+ ++ G T + ++ Sbjct: 2 ISKELRHIFAQAVSYAKSSKHEYLTVEHVFL-MLINDQTIENLFIDLGVDTNILFNELKS 60 Query: 143 MRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNP 202 + A ++ V + TI + T+++ Sbjct: 61 YIDENTPLLPND-----------------ANDEPIETVS-----LSSTIDYMVSHTQSS- 97 Query: 203 VLIGEPGVGKT-AIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKG 261 GKT A VE + I+ E + + ++ ++ E E++ Sbjct: 98 --------GKTNANVEDMFVAILKDEKSYSTYLLKKYGIQRVDILEEISHKDEDEQK--- 146 Query: 262 VLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQ 321 ++ ++ E + EL ++ G+ + P + R E + Sbjct: 147 -NDENSENEKVLDKNSSELVSIAKKGE----------IDPVIGRDR----------EISR 185 Query: 322 YIEKDAALERRF--QKVFVAEPSVEDT-------IAILRGLKERYELHHHVQITDP-AIV 371 IE L RR + V EP V T + I + + L V D +++ Sbjct: 186 VIE---ILSRRKKNNPILVGEPGVGKTAIAEGLALQIAQKKVPEFLLDSKVFSLDMGSMI 242 Query: 372 AAATLSHRYIADRQLPDK-------AIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKL 424 A + + K AI IDE + + + + Sbjct: 243 AGTKYRGDFEKKLKSLLKEVSKIKNAILFIDEIHTIVGAGSVGGSAMDASNILKPMLANG 302 Query: 425 EQQAL------MKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAE 478 + + + +D + K L ++ +E + + K+ +K Sbjct: 303 KLRCIGATTFSEFRNDFSKDKALSRRFAKVDVEEPSIEDSILILEGLKSKYEEYHGVKYS 362 Query: 479 LEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAE 538 + A+E +++ + + I E+ + + KT +T ++ E Sbjct: 363 KSAIQSAVELSKKYITDRFLPDCAIDVIDEVGAAKKISLATTLKTKAESNITITSKDVEE 422 Query: 539 VLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPI 598 ++++ IP +++ L +E+ + RV GQ+ A+ + AI+R++AGL +PI Sbjct: 423 IISKMAHIPPKSATKTDLSLLKNLEKNMQKRVFGQDTAISTIVQAIKRNKAGLGLDKKPI 482 Query: 599 GSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEE 658 GSFLF GPTGVGKTE+ + L+ M R DMSE+ME H+VSRL+GAP GYVG+E+ Sbjct: 483 GSFLFTGPTGVGKTEVARELSLQM---GIHFERFDMSEYMEAHTVSRLIGAPAGYVGFEQ 539 Query: 659 GGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTS 718 GG LTEA+R+ P++V+LLDE+EKAHPD+ +ILLQV+D+ +LTD G DF+N V+IMTS Sbjct: 540 GGLLTEAIRKHPHTVLLLDEIEKAHPDLMSILLQVMDNAQLTDNSGNKADFQNVVLIMTS 599 Query: 719 NLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQ 778 NLG+ + + ++ F PEF NR+D VV F L ++ + Sbjct: 600 NLGATEANVMGFAKNEKLNENK---AINKFFAPEFRNRLDAVVTFESLNIDVVSKVVGKF 656 Query: 779 LKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGEL 838 ++ L K+L ++ +I IS +A K L+ GYD GARPL + I +I+NPL +IL G+L Sbjct: 657 IEDLEKQLVDKKIKIEISVKAKKELAILGYDKAMGARPLNKVISDKIKNPLTDEILFGKL 716 Query: 839 VPGKVIRLEVNED 851 G +++++ N + Sbjct: 717 KKGGIVKIDYNNE 729 >UniRef50_C5YMW4 Putative uncharacterized protein Sb07g002440 n=1 Tax=Sorghum bicolor RepID=C5YMW4_SORBI Length = 818 Score = 366 bits (940), Expect = 2e-99, Method: Composition-based stats. Identities = 231/796 (29%), Positives = 350/796 (43%), Gaps = 155/796 (19%) Query: 69 NRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRG-DNFISSELFVLAALESRGTLADILK 127 + ++ S ++ + L + Q + IS ++ RG+ LK Sbjct: 165 QKNSRLVTRATLNSFSGEVKNIFALAQEETQHLALKSGISQVFQIINGRVRRGSSESPLK 224 Query: 128 AAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEI 187 + + R ++ + + L +Y DLT A +GKLDPVIGR ++I Sbjct: 225 TRSNDDS------LEKRSSKTCAETKNKISTPTLDEYGTDLTTLANKGKLDPVIGRQKQI 278 Query: 188 RRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVA 247 + +Q+L R+ KNNP LIGEPGVGKTA+VE LAQ I G+VPE ++G++ Sbjct: 279 DQVVQILSRKGKNNPCLIGEPGVGKTAVVESLAQLIAMGDVPETMQGKKFT--------- 329 Query: 248 GAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKA-DGAMDAGNMLKPALARG 306 LHT+VGAG A +GA+DA N+LKPALARG Sbjct: 330 --------------------------------LHTLVGAGAAVEGAIDAANILKPALARG 357 Query: 307 ELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQIT 366 EL C+GATT D Y ++IEKD ALERRF++V V EP VE+ I IL+GL+ERYE HH VQ Sbjct: 358 ELQCIGATTTDGYMKHIEKDPALERRFRQVKVPEPMVEEAIEILKGLRERYETHHKVQYA 417 Query: 367 DPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQ 426 D A+ AAA LSH+YI+DR LPDKAIDLIDEA S +R++ E Sbjct: 418 DEALSAAAELSHKYISDRFLPDKAIDLIDEAGSLVRLRHAQPKLPK------------EL 465 Query: 427 QALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAI 486 Q + E + +K++ D + E K ++ + E E K++ + + + I Sbjct: 466 QDFVTEIKKITKEKCDTIRIENFKKAKELRDRELELKSQLTTTLQIGNDEDGGGLHRRII 525 Query: 487 EQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGI 546 Q V ++R + + + + + V A TG+ Sbjct: 526 GQDEAVTAVSRAIRRARVGLSDPRRPIASF----------------------VFAGPTGV 563 Query: 547 PVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLG- 605 S + + + G +A R +++ +G Sbjct: 564 GKS-----------ELAKAVAAYYYGSEDA---------MVRLDMSELMEKHAVARLVGA 603 Query: 606 -PTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTE 664 P VG E L + ++V +D + + L+ + G LT+ Sbjct: 604 PPGYVGHGEGGGQLTEAVRRRPHSLVLLDEVDKAHPEVMDVLLQ-------VLDDGRLTD 656 Query: 665 AVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDL 724 G GRTVDFRNT++IMTSN+G Sbjct: 657 -------------------------------------GMGRTVDFRNTLIIMTSNIGGGN 679 Query: 725 IQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYK 784 + KE+V + FRPEF+NR+DE +VF PL IA + + + Sbjct: 680 GGSGD--GSRSSSKEVVEEEMKRYFRPEFLNRLDETIVFRPLTRVDGKEIAAVLVSDVAA 737 Query: 785 RLEERG---YEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGEL-VP 840 R+ E+ +++ + L+ E G+DP YGAR L+RA+ +E+ LA ++L GE+ Sbjct: 738 RVSRETMMVVELRVTERFMDLVVEEGFDPWYGARALRRAVVMLLEDTLADKLLDGEIVKA 797 Query: 841 GKVIRLEVNEDRIVAV 856 G + ++ + V V Sbjct: 798 GDTVIVDADAAGNVVV 813 >UniRef50_Q73KU3 ATP-dependent Clp protease, ATP-binding subunit ClpA n=1 Tax=Treponema denticola RepID=Q73KU3_TREDE Length = 785 Score = 365 bits (936), Expect = 5e-99, Method: Composition-based stats. Identities = 179/612 (29%), Positives = 297/612 (48%), Gaps = 41/612 (6%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M ++ + DA A +++F+ P HL+ A++ L T +G + G + Sbjct: 1 MNFT-VSLTVRRIFQDAVEDAKKRNHEFVTPEHLLWAIMFNPK--ALELFTLSGSDLGYI 57 Query: 61 RTDINQALNR--LPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES 118 ++N L + + + + L V I +++ ++ Sbjct: 58 HDNLNTYLENKVPVRTQDNQAEPIQTVGLQNVFERAILNCNAAEKPVIGINDIIVSLMDE 117 Query: 119 R-GTLADILKAAGATTANITQ------------------------------AIEQMRGGE 147 + +K +G + Q E Sbjct: 118 EKNHCSFFMKQSGIDRLRLLQLVSSPDFYDDGKNRSAYEEAEDVQEAQGVKEDSARHNSE 177 Query: 148 SVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGE 207 N ++ Q+ L+++T++LTE+A +G+L P+IGR+EEI RTIQ+L R+ KNNP+ +G Sbjct: 178 EKNTDKSKAQKTYLERFTVNLTEKARKGRLSPIIGREEEIERTIQILCRKQKNNPIHVGG 237 Query: 208 PGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLA 267 GVGKTAI EGLAQRI +VP LK + +L + L+AGAK+RG+FEERLK ++++++ Sbjct: 238 AGVGKTAITEGLAQRITANKVPSFLKNANIYSLSLSDLLAGAKFRGDFEERLKRIVSEIS 297 Query: 268 KQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDA 327 +++ N ILFIDE+HT+V A G ++A ++LKP LA G++ C+GATT +EY ++ KDA Sbjct: 298 REK-NAILFIDEIHTIVNANSGGGGIEAPDLLKPILANGKVRCIGATTFEEYNKHFTKDA 356 Query: 328 ALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLP 387 AL RRFQK+ + EP+ E+ + IL+GL+E YE H V +D + +A LS +I DR LP Sbjct: 357 ALARRFQKIDIEEPNEEEAVKILKGLRESYENFHKVHYSDEVLESAVHLSAIHIRDRFLP 416 Query: 388 DKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEE 447 DKAIDLIDEA + I+++ D + E + ++ + + L + +L +K Sbjct: 417 DKAIDLIDEAGALIKIRADKEKNENEADEKGLEETALPEVSLSDIDKIVAKTAKIPEQRV 476 Query: 448 LSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIP 507 ++ + EE + T + +A R D + L G Sbjct: 477 SVNETEKLRHFEEILSKKIFGQD---TAIEGVTKAVKRSRAGFRSKDKPVANFLFVGPTG 533 Query: 508 ELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELH 567 + +L A T E + LLR +++ + ++R G P + E L Q+ Sbjct: 534 VGKTEL-AKTLAEELGIPLLRFDMSEYQEKHTVSRLIGSPPGYVGFEEGGLLTSAVQKSP 592 Query: 568 HRVIGQNEAVDA 579 + V+ +E A Sbjct: 593 NAVLLLDEIEKA 604 Score = 335 bits (858), Expect = 5e-90, Method: Composition-based stats. Identities = 204/813 (25%), Positives = 347/813 (42%), Gaps = 81/813 (9%) Query: 80 DVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG------TLADILKAAGATT 133 + S + R+ + A+KR F++ E + A + + L Sbjct: 2 NFTVSLTVRRIFQDAVEDAKKRNHEFVTPEHLLWAIMFNPKALELFTLSGSDLGYIHDNL 61 Query: 134 ANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQV 193 + +R ++ + Q + + I AE+ PVIG I I Sbjct: 62 NTYLENKVPVRTQDNQAEPIQTVGLQNVFERAILNCNAAEK----PVIG----INDIIVS 113 Query: 194 LQRRTKNNP-VLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYR 252 L KN+ + + G+ + ++ Q + + + + K R V A+ Sbjct: 114 LMDEEKNHCSFFMKQSGIDRLRLL----QLVSSPDFYDDGKNRSAYE--EAEDVQEAQGV 167 Query: 253 GEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVG 312 E R + K + +++ + G + P + R Sbjct: 168 KEDSARHNSEEKNTDKSKAQ-KTYLERFTVNLTEKARKGRLS------PIIGR------- 213 Query: 313 ATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVA 372 +E + I+ ++ + V V T AI GL +R + A + Sbjct: 214 ---EEEIERTIQILCRKQKN-NPIHVGGAGVGKT-AITEGLAQRITANKVPSFLKNANIY 268 Query: 373 AATLSH----------------RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 416 + +LS R +++ AI IDE + + E L Sbjct: 269 SLSLSDLLAGAKFRGDFEERLKRIVSEISREKNAILFIDEIHTIVNANSGGGGIEAPDLL 328 Query: 417 RRIIQL---------KLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKA 467 + I+ E+ D A +R ++ E ++E K + Sbjct: 329 KPILANGKVRCIGATTFEEYNKHFTKDAALARRFQKIDIEEPNEEEAVK----ILKGLRE 384 Query: 468 SLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPEL--------EKQLEAATQL 519 S + E + A+ + + + I E +K+ Sbjct: 385 SYENFHKVHYSDEVLESAVHLSAIHIRDRFLPDKAIDLIDEAGALIKIRADKEKNENEAD 444 Query: 520 EGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDA 579 E +V+ ++I +++A+ IP R+ +E EKL E+ L ++ GQ+ A++ Sbjct: 445 EKGLEETALPEVSLSDIDKIVAKTAKIPEQRVSVNETEKLRHFEEILSKKIFGQDTAIEG 504 Query: 580 VSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFME 639 V+ A++RSRAG ++P+ +FLF+GPTGVGKTEL K LA + ++R DMSE+ E Sbjct: 505 VTKAVKRSRAGFRSKDKPVANFLFVGPTGVGKTELAKTLAEEL---GIPLLRFDMSEYQE 561 Query: 640 KHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRL 699 KH+VSRL+G+PPGYVG+EEGG LT AV++ P +V+LLDE+EKAH D++NILLQ++D L Sbjct: 562 KHTVSRLIGSPPGYVGFEEGGLLTSAVQKSPNAVLLLDEIEKAHADIYNILLQIMDYATL 621 Query: 700 TDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKE-LVLGVVSHNFRPEFINRID 758 TD QGR F N ++IMTSN GS I + + E V V F PEF NR+D Sbjct: 622 TDNQGRKAAFNNIILIMTSNAGSSNIGKPLIGFGGERISESAVDEAVEKTFTPEFRNRLD 681 Query: 759 EVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLK 818 ++ F PL Q ++ I + +++++ +L E+ + + D+ + LL+E GY +GAR Sbjct: 682 AIIKFGPLTMQVMSLIIKKEVEKIRSQLAEKEISLELEDDVIPLLAEKGYSEEFGARNAA 741 Query: 819 RAIQQQIENPLAQQILSGELVPGKVIRLEVNED 851 R ++ + PL IL GE G ++ ++ + Sbjct: 742 RLVEDEFVTPLTDMILFGETKKGSSVKCQIGDK 774 >UniRef50_B9H7W9 Predicted protein n=3 Tax=rosids RepID=B9H7W9_POPTR Length = 643 Score = 365 bits (936), Expect = 5e-99, Method: Composition-based stats. Identities = 175/385 (45%), Positives = 250/385 (64%), Gaps = 2/385 (0%) Query: 474 TIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTD 533 +++ A A+ A R+ + K +L + A QL + VT+ Sbjct: 242 EAHHDVKYADEALVAAVRLSNQYISGLFLPDKAIDLIDEAGARVQLRQARSASEKLLVTE 301 Query: 534 AEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLAD 593 +I V++ TGIP+ ++ + E +LL ME ELH ++GQ EAV AVS+AIRR+R G D Sbjct: 302 EDIQAVVSMVTGIPLDKVTDKESRRLLNMEAELHKYIVGQEEAVKAVSHAIRRARVGTKD 361 Query: 594 PNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGY 653 PN+PI SFLF GPTGVGKTEL KALA F S EA+VRIDMSE+MEKH+VS+L G+PPGY Sbjct: 362 PNKPIASFLFTGPTGVGKTELAKALAVEYFGSKEAVVRIDMSEYMEKHTVSKLFGSPPGY 421 Query: 654 VGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTV 713 +GY++GG TEAVR R ++V+L DE+EKAH DV + LQ+LDDG LTDG+GR VDF+NT+ Sbjct: 422 IGYDDGGQFTEAVRCRAHTVVLFDEIEKAHQDVNRVFLQILDDGTLTDGKGRKVDFKNTI 481 Query: 714 VIMTSNLGSDLI--QERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHI 771 +IMTSN+G+ LI ++ E+ + +K +V + F PEF+NRIDEV+VF L + Sbjct: 482 IIMTSNIGNSLIAQEDEEDEIRFNTVKLIVAEELKKEFSPEFLNRIDEVIVFRKLNNAQL 541 Query: 772 ASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQ 831 IA + L +Y RL+ + I ++D + + E G + YGARPLKRAI + +E+ +A+ Sbjct: 542 NEIADLMLAEVYGRLKAKNIIIRVTDGLKRKIIEEGNNLSYGARPLKRAIVRLLEDNIAK 601 Query: 832 QILSGELVPGKVIRLEVNEDRIVAV 856 IL+G + G+ + ++VN + V + Sbjct: 602 GILNGFVEEGRSVIVDVNSNGNVIM 626 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 162/478 (33%), Positives = 254/478 (53%), Gaps = 18/478 (3%) Query: 116 LESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQG 175 LE + AD+L G + Q ++ V + + + L QG Sbjct: 4 LEKQHFKADMLNKYGTDLTKMAQEVKPDFSFSHVLAEPVTSELATITLTLASLNGIL-QG 62 Query: 176 KLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGR 235 KLD V+GR ++I R Q+L +R KNNP L+G+PGVGKT IVEGLA I+ G VP L+G+ Sbjct: 63 KLDQVVGRRKQIERVTQILCKRRKNNPCLVGDPGVGKTVIVEGLAANIVKGTVPSKLEGK 122 Query: 236 RVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDA 295 ++ ALDM LVAG K+ G+FEERL G+++++ + +GN++LFIDELHT+VG G+ +DA Sbjct: 123 KIFALDMARLVAGTKFHGDFEERLTGIVDEVKQSDGNIVLFIDELHTLVGNGQT---LDA 179 Query: 296 GNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKE 355 N+LKPALARGEL C+GATT+DEYR+YIEKD AL+RRF V V EPSV++ + IL+G++ Sbjct: 180 TNILKPALARGELKCIGATTIDEYRRYIEKDGALKRRFLHVDVPEPSVDEAVEILKGIQG 239 Query: 356 RYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRL 415 +YE HH V+ D A+VAA LS++YI+ LPDKAIDLIDEA + ++++ E + Sbjct: 240 KYEAHHDVKYADEALVAAVRLSNQYISGLFLPDKAIDLIDEAGARVQLRQARSASEKLLV 299 Query: 416 DRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTI 475 I Q + + K D + L + E + + + + + Sbjct: 300 TEEDI-----QAVVSMVTGIPLDKVTDKESRRLLNMEAELHKYIVGQE------EAVKAV 348 Query: 476 KAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAE 535 + +A++ + + + EL K L + + +R +++ Sbjct: 349 SHAIRRARVGTKDPNKPIASFLFTGPTGVGKTELAKALAVEYFGSKEAV--VRIDMSEYM 406 Query: 536 IAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLAD 593 +++ G P + + + + H V+ +E ++ + R + D Sbjct: 407 EKHTVSKLFGSPPGYIGYDDGGQFTEAVRCRAHTVVLFDE-IEKAHQDVNRVFLQILD 463 >UniRef50_Q2GGQ4 ATP-dependent Clp protease, ATP-binding subunit ClpA n=26 Tax=Proteobacteria RepID=Q2GGQ4_EHRCR Length = 765 Score = 362 bits (928), Expect = 4e-98, Method: Composition-based stats. Identities = 182/604 (30%), Positives = 286/604 (47%), Gaps = 48/604 (7%) Query: 1 MRLDR--LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAG 58 M+L+ L+ + +L A S+A +++ HL+ AL + + + ++ Sbjct: 1 MKLEMSVLSKNLEASLHKALSIAFDFHHEYATLEHLLLALT--DDIDARRVFYAFRVSID 58 Query: 59 QLRTDINQALNRLPQV--EGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL 116 +L+ I L + +V+P+ R+++ A G + ++ + L Sbjct: 59 KLKITIINFLRYEIPTLIDKGISEVKPTAIFERLIHRAIIHAHTSGKSEVTGANILAEIL 118 Query: 117 ESRGTLA--------------------DILKAAGATTANITQAIEQMRGGESVNDQGAED 156 + + + + L A + ++ Sbjct: 119 SEKDSYSACFLHEQNIKYIDVVNYTSNNNLYAGEFNVDQEFVKYNEYGKSIGNVNKDILK 178 Query: 157 QRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIV 216 + L Y ++L E A++GK+D VIGR E+ RT++VL RR KNNP+ +G+PGVGKTAIV Sbjct: 179 DNETLDSYCVNLNEAAKKGKIDYVIGRAYELERTMEVLLRRRKNNPLYVGDPGVGKTAIV 238 Query: 217 EGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILF 276 EGLA +II G+VP+ LK + +LDMGAL+AG +YRG+FEER+K V+ + +E N ILF Sbjct: 239 EGLALKIIEGDVPDQLKKMVIYSLDMGALLAGTRYRGDFEERIKSVIKAIEAKE-NAILF 297 Query: 277 IDELHTMVGAGK-ADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQK 335 IDE+HT+VGAG + G++DA N+LKPALARG L C+GATT EY EKD AL RR+QK Sbjct: 298 IDEIHTIVGAGSTSGGSLDASNLLKPALARGTLRCIGATTYKEYNNNFEKDRALARRYQK 357 Query: 336 VFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLID 395 + V E SV +T+ IL G+K YE HH V+ T+ AI AA LS RYI+ + LPDKA+D+ID Sbjct: 358 INVEESSVGETLRILDGIKSYYESHHQVRYTNQAIKYAAELSDRYISGKMLPDKAVDVID 417 Query: 396 EAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQY 455 EA ++ II E S + L+ + +E Sbjct: 418 EAGVYCKLHNTGNKVITGSDIEHIISRITEIPC--------SNLLFNDLDRVKNLEENLK 469 Query: 456 SELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEA 515 ++ + A + + KA L + G + K A Sbjct: 470 KDIFGQDFAISHLVDSIKIAKAGLRNYNKPLASYLFSGPTG------------VGKTELA 517 Query: 516 ATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNE 575 M+L+R +++ + +++ G P + + L + V+ +E Sbjct: 518 RQLANHMGMKLIRFDMSEYMESHAISKIIGSPPGYVGYDQGGLLTDSISRHQYSVLLLDE 577 Query: 576 AVDA 579 A Sbjct: 578 IEKA 581 Score = 332 bits (851), Expect = 3e-89, Method: Composition-based stats. Identities = 178/801 (22%), Positives = 335/801 (41%), Gaps = 76/801 (9%) Query: 82 QPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAGATTANITQAIE 141 S++L L+ +A + + E +LA + + A + + I Sbjct: 7 VLSKNLEASLHKALSIAFDFHHEYATLEHLLLALTDDID-ARRVFYAFRVSIDKLKITII 65 Query: 142 QMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNN 201 E L RA ++L + + Sbjct: 66 NFLRYEIPTLIDKGISEVKPTAIFERLIHRAIIHAHTSGKSEVTGANILAEILSEKDSYS 125 Query: 202 PVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKG 261 + E Q I +V + A + KY E+ + + Sbjct: 126 ACFLHE-------------QNIKYIDVVNYTSNNNLYAGEFNVDQEFVKY-NEYGKSIGN 171 Query: 262 VLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQ 321 V D+ K +D + G +D +G Y Sbjct: 172 VNKDILKDNET----LDSYCVNLNEAAKKGKIDY--------------VIG----RAYEL 209 Query: 322 YIEKDAALERRFQ-KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSH-- 378 + L RR ++V +P V T AI+ GL + ++ + + Sbjct: 210 ERTMEVLLRRRKNNPLYVGDPGVGKT-AIVEGLALKIIEGDVPDQLKKMVIYSLDMGALL 268 Query: 379 ---RY-----------IADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKL 424 RY I + + AI IDE + + S + + Sbjct: 269 AGTRYRGDFEERIKSVIKAIEAKENAILFIDEIHTIVGAGSTSGGSLDASNLLKPALARG 328 Query: 425 EQQAL------MKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAE 478 + + ++ + L ++++ +E E K+ ++ Sbjct: 329 TLRCIGATTYKEYNNNFEKDRALARRYQKINVEESSVGETLRILDGIKSYYESHHQVRYT 388 Query: 479 LEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAE 538 + K A E + R + + I E + K +T ++I Sbjct: 389 NQAIKYAAELSDRYISGKMLPDKAVDVIDE--------AGVYCKLHNTGNKVITGSDIEH 440 Query: 539 VLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPI 598 +++R T IP S ++ ++ +++ +E+ L + GQ+ A+ + ++I+ ++AGL + N+P+ Sbjct: 441 IISRITEIPCSNLLFNDLDRVKNLEENLKKDIFGQDFAISHLVDSIKIAKAGLRNYNKPL 500 Query: 599 GSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEE 658 S+LF GPTGVGKTEL + LAN M ++R DMSE+ME H++S+++G+PPGYVGY++ Sbjct: 501 ASYLFSGPTGVGKTELARQLANHM---GMKLIRFDMSEYMESHAISKIIGSPPGYVGYDQ 557 Query: 659 GGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTS 718 GG LT+++ R YSV+LLDE+EKAH D++NILLQ++D G +TD G+ V+F N V+I+T+ Sbjct: 558 GGLLTDSISRHQYSVLLLDEIEKAHSDIYNILLQIMDYGCVTDTYGKKVNFHNVVIILTT 617 Query: 719 NLGSDLIQERFGELDYAHMKEL--VLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQ 776 N G+ + + + F PEF NR+D ++ F L ++ + I + Sbjct: 618 NAGAFELSKSSIGFIRNKSFTHGDNEKAIERIFSPEFRNRLDAIISFSSLDQEVMLRIVK 677 Query: 777 IQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSG 836 + +L ++L ++ I ++D+ L L+++GY+ YG R ++ I ++++ LA++IL G Sbjct: 678 KFIYQLKEQLAKKNVHIDVADDVLMYLAQSGYNDAYGVRNIENIISKKVKKYLAEEILFG 737 Query: 837 ELVPGKVIRL--EVNEDRIVA 855 +L G +++ + + +++V Sbjct: 738 KLFNGGNVKIKLDADTNKLVY 758 >UniRef50_B8BRH2 Member of the clp superfamily, regulatory gamma subunit (Fragment) n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8BRH2_THAPS Length = 782 Score = 361 bits (927), Expect = 6e-98, Method: Composition-based stats. Identities = 210/789 (26%), Positives = 340/789 (43%), Gaps = 57/789 (7%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQ---EGGSVSPLLTSAGINAGQ 59 +D+L++ A++ +Q + +E L+ ++ + +LTS GI+ Sbjct: 7 MDKLSDGCIKAISFSQDASHNLGVSTLENEMLLVGMVRSAGADDIEARKILTSFGISPDG 66 Query: 60 LRTDINQALNR-------LPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFV 112 L + + + S + + L+ +A + G + + Sbjct: 67 SLKAAETVLIKRGVADINNSKSGEGLPPLPFSDSVKKTLSEAVSIADRMGSGAVLPGHVL 126 Query: 113 LAALESRGTLADILK--AAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTE 170 LA LE + + A A + + E V L K IDLTE Sbjct: 127 LAVLEYDDRYSVATEDAEKCAGLAVLQKTAESSPVTLIVVGGNEGMSTPTLDKVGIDLTE 186 Query: 171 RAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIING---- 226 A +G+LD V GR+ EIR ++ L RR K+NP LIGE GVGKTAI EG+AQ + Sbjct: 187 MAREGRLDAVYGRENEIRMCLRTLGRRRKSNPCLIGEAGVGKTAIAEGVAQCLAESLPPL 246 Query: 227 -EVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVG 285 P L+G RV+++DM +LVAG K+RG+FEER++ ++ + ILFIDELHT++G Sbjct: 247 PPCPRALQGFRVVSVDMASLVAGMKFRGDFEERIQNLIKE--ASSTPTILFIDELHTLIG 304 Query: 286 AGKADGA--MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSV 343 AG G M A N++KPALARGE+ +GATT+ EYRQYIEKD ALERRFQ + V EP+V Sbjct: 305 AGGGGGDGGMSAANLMKPALARGEIRVIGATTISEYRQYIEKDGALERRFQPILVNEPTV 364 Query: 344 EDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRM 403 ++ I IL + RYE H V+ T AI AA L+ RYI DR LPDKAIDL+DEA S +++ Sbjct: 365 DEAIEILTAVTPRYEEFHGVRYTPFAIDAAVRLAERYINDRFLPDKAIDLLDEAGSMVKL 424 Query: 404 QIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWK 463 D + ++L + + K D + + + ++ + Sbjct: 425 ADDGEEDDLPDDFFVVTDDNVATVVSEISGIPVGKLDRDEKAKLMRLEADIAKRVKGQDP 484 Query: 464 AEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKT 523 A + + ++ L + G EL K L K Sbjct: 485 AVNSVARAIRRARSGLRDQTKPVATFLFCGPT-------GVGKTELCKALAQTYYGREKD 537 Query: 524 MRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIG---QNEAVDAV 580 ++R +++ ++R G P + E +L + H V+ +A + V Sbjct: 538 --IIRIDMSEYMERFSVSRLVGAPPGYVGYDEGGQLTEAIRRKPHSVVLFDELEKAHEDV 595 Query: 581 SNAIRRSR-AGLADPNRPIGSFL----FLGPTGVGKTELCKALANFMFDSDEAMVRIDMS 635 N + + G + F+ + +G E+ K L+ + EA M+ Sbjct: 596 LNVLLQILDEGSLTDGKGRTVSFKNCIFVMTSNIGSQEILK-LSRGENPTAEAGSSAGMT 654 Query: 636 EFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLD 695 + GA + + + +++ +E + +I + +LD Sbjct: 655 ----------MEGAVKNELEKKMKPEFLNRIDE----IVVFKPLE--DDVLISIAMNILD 698 Query: 696 DG--RLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEF 753 + R Q V +++ +N G+ + K + +S EF Sbjct: 699 ETMKRAASEQDMAVTCTQSLMATVANEGAFSAAQFGARPMRRAAKRFLEDTLSEAIMREF 758 Query: 754 INRIDEVVV 762 ++ DEV+V Sbjct: 759 LSEGDEVIV 767 Score = 356 bits (913), Expect = 2e-96, Method: Composition-based stats. Identities = 160/414 (38%), Positives = 241/414 (58%), Gaps = 12/414 (2%) Query: 451 KERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELE 510 E E E A ++ A+ A R + + + + E Sbjct: 360 NEPTVDEAIEILTAVTPRYEEFHGVRYTPFAIDAAVRLAERYINDRFLPDKAIDLLDEAG 419 Query: 511 KQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRV 570 ++ A E + VTD +A V++ +GIPV ++ E+ KL+R+E ++ RV Sbjct: 420 SMVKLADDGEEDDLPDDFFVVTDDNVATVVSEISGIPVGKLDRDEKAKLMRLEADIAKRV 479 Query: 571 IGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMV 630 GQ+ AV++V+ AIRR+R+GL D +P+ +FLF GPTGVGKTELCKALA + ++ ++ Sbjct: 480 KGQDPAVNSVARAIRRARSGLRDQTKPVATFLFCGPTGVGKTELCKALAQTYYGREKDII 539 Query: 631 RIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNIL 690 RIDMSE+ME+ SVSRLVGAPPGYVGY+EGG LTEA+RR+P+SV+L DE+EKAH DV N+L Sbjct: 540 RIDMSEYMERFSVSRLVGAPPGYVGYDEGGQLTEAIRRKPHSVVLFDELEKAHEDVLNVL 599 Query: 691 LQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDY---------AHMKELV 741 LQ+LD+G LTDG+GRTV F+N + +MTSN+GS I + + M+ V Sbjct: 600 LQILDEGSLTDGKGRTVSFKNCIFVMTSNIGSQEILKLSRGENPTAEAGSSAGMTMEGAV 659 Query: 742 LGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLE-ERGYEIHISDEAL 800 + +PEF+NRIDE+VVF PL + + SIA L KR E+ + + + Sbjct: 660 KNELEKKMKPEFLNRIDEIVVFKPLEDDVLISIAMNILDETMKRAASEQDMAVTCTQSLM 719 Query: 801 KLLSENG--YDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDR 852 ++ G +GARP++RA ++ +E+ L++ I+ L G + +++ + Sbjct: 720 ATVANEGAFSAAQFGARPMRRAAKRFLEDTLSEAIMREFLSEGDEVIVDMANES 773 >UniRef50_A5MZQ1 ClpA n=7 Tax=Clostridium RepID=A5MZQ1_CLOK5 Length = 746 Score = 361 bits (926), Expect = 6e-98, Method: Composition-based stats. Identities = 169/588 (28%), Positives = 284/588 (48%), Gaps = 35/588 (5%) Query: 5 RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDI 64 +L + A + A +++ P H++ A L G ++ S G N ++ D+ Sbjct: 2 KLDKIVNEIITAAYNEARYCKHEYFTPEHVLYAALFFPEGI--DIIESCGGNVKNIKRDL 59 Query: 65 NQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLAD 124 Q N + + + L +L + I ++ + + A Sbjct: 60 LQYFNDNIETT-EKKEPLETIGLQNILTSAGEHVLAAEKEVIKLGDIFISIYDEEQSFAS 118 Query: 125 I-LKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALK-----------KYTIDLTERA 172 L+ G +I I + ED + + + +DLT++A Sbjct: 119 FFLRKQGIRRIDILNYITHGISATMFDYNIEEDSKYLVDEEDTQSVLNIGDFAVDLTQKA 178 Query: 173 EQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGL 232 + G +DP+IGR++ I RTIQVL RR KNNP+ +GEPGVGKTAI EGLA+ I+ +VP L Sbjct: 179 KMGDMDPLIGREDIIYRTIQVLSRRNKNNPIHVGEPGVGKTAITEGLAKLIVENKVPNLL 238 Query: 233 KGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGK-ADG 291 K ++ +LDMG+++AG KYRG+FE+R+K L + K++ ++ +IDE+HT++GAG + G Sbjct: 239 KDSKIYSLDMGSILAGTKYRGDFEDRIKNTLKKIQKEDKPIV-YIDEIHTIIGAGSVSGG 297 Query: 292 AMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILR 351 ++DA N+LKP L G++ +G+TT DEY++ EKD AL RRFQ++ V EPSVEDT +IL Sbjct: 298 SLDAANILKPFLTSGKIKFIGSTTYDEYKKIFEKDRALARRFQRIEVPEPSVEDTYSILS 357 Query: 352 GLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEE 411 G+KE YE H+V + A+ +A LS +YI DR LPDKAID+IDE + +R+ Sbjct: 358 GIKEHYEKFHNVIYKEEALKSAVDLSVKYINDRFLPDKAIDVIDETGAYVRLHSS----- 412 Query: 412 LDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSG 471 D I ++ +E+ D + ++ + +A + + Sbjct: 413 -DDKKIVIDKVHIEKTIAAMAKIPEQTLSQDETKVLKDLDKVLKKKVFGQEEAIDSLVRA 471 Query: 472 TQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKV 531 + + A D ++ L + + K + + + +R + Sbjct: 472 IKRSR------------AGFNEDNKTVASLLFVGPTGVGKTEISKQLAKALNIPFIRFDM 519 Query: 532 TDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDA 579 ++ + +AR G P + E L + ++ + V+ +E A Sbjct: 520 SEYQEKHTVARLVGSPPGYVGYEEGGLLTDVIRKTPYCVLLLDEIEKA 567 Score = 320 bits (820), Expect = 1e-85, Method: Composition-based stats. Identities = 186/797 (23%), Positives = 335/797 (42%), Gaps = 90/797 (11%) Query: 87 LVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAGATTANITQAIEQMRGG 146 + ++ A+ + + E + AAL + DI+++ G NI + + Q Sbjct: 7 VNEIITAAYNEARYCKHEYFTPEHVLYAALFFPEGI-DIIESCGGNVKNIKRDLLQYFND 65 Query: 147 ESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIG 206 ++++ L+ + + + V+ ++E+ + + Sbjct: 66 NI----ETTEKKEPLETIGL---QNILTSAGEHVLAAEKEVIKLGDIFIS---------- 108 Query: 207 EPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALV----AGAKYRGEFEERLKGV 262 L+ + + +D+ + + + EE K + Sbjct: 109 -------------IYDEEQSFASFFLRKQGIRRIDILNYITHGISATMFDYNIEEDSKYL 155 Query: 263 LNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQY 322 +++ ++ +L I + + G MD P + R ++ YR Sbjct: 156 VDE---EDTQSVLNIGDFAVDLTQKAKMGDMD------PLIGREDII---------YRTI 197 Query: 323 IEKDAALERRF--QKVFVAEP-------SVEDTIAILRGLKERYELHHHVQITDPAIVAA 373 L RR + V EP + I+ + D + A Sbjct: 198 QV----LSRRNKNNPIHVGEPGVGKTAITEGLAKLIVENKVPNLLKDSKIYSLDMGSILA 253 Query: 374 ATLS--------HRYIADRQLPDKAIDLIDEAASSIRM------QIDSKPEELDRLDRRI 419 T + Q DK I IDE + I +D+ L Sbjct: 254 GTKYRGDFEDRIKNTLKKIQKEDKPIVYIDEIHTIIGAGSVSGGSLDAANILKPFLTSGK 313 Query: 420 IQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAEL 479 I+ + + L + + E + K + + Sbjct: 314 IKFIGSTTYDEYKKIFEKDRALARRFQRIEVPEPSVEDTYSILSGIKEHYEKFHNVIYKE 373 Query: 480 EQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEV 539 E K A++ + + + + + I E + + + K + + I + Sbjct: 374 EALKSAVDLSVKYINDRFLPDKAIDVIDETGAYVRLHSSDDKKIV------IDKVHIEKT 427 Query: 540 LARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIG 599 +A IP + + E + L +++ L +V GQ EA+D++ AI+RSRAG + N+ + Sbjct: 428 IAAMAKIPEQTLSQDETKVLKDLDKVLKKKVFGQEEAIDSLVRAIKRSRAGFNEDNKTVA 487 Query: 600 SFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEG 659 S LF+GPTGVGKTE+ K LA + + +R DMSE+ EKH+V+RLVG+PPGYVGYEEG Sbjct: 488 SLLFVGPTGVGKTEISKQLAKAL---NIPFIRFDMSEYQEKHTVARLVGSPPGYVGYEEG 544 Query: 660 GYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSN 719 G LT+ +R+ PY V+LLDE+EKAHPDV NILLQ++D LTD G+ DF+NT +IMTSN Sbjct: 545 GLLTDVIRKTPYCVLLLDEIEKAHPDVLNILLQIMDYATLTDNTGKKTDFKNTTIIMTSN 604 Query: 720 LGSDLIQER-FGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQ 778 G+ + + G + K+ + V+ F PEF NR+D+++ F+ + ++ +A+ Sbjct: 605 AGARSVGKALMGFGERIVKKDAISEEVNRIFSPEFRNRLDDIIYFNSMNDKMAYLVAKKV 664 Query: 779 LKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGEL 838 + + K+L + +I+++D+ + LS+ G YGAR + R +QQ I+ ++L + Sbjct: 665 VGQFEKQLLSKDIKINVTDKCYRWLSKKGVSLEYGAREIIRIVQQDIKPYFVDKVLFNDN 724 Query: 839 VPGKVIRLEVNEDRIVA 855 + + ++V D I Sbjct: 725 IENTISIIDVENDSIKI 741 >UniRef50_P05444 ClpA homolog protein n=766 Tax=cellular organisms RepID=CLPA_RHOBL Length = 793 Score = 360 bits (923), Expect = 2e-97, Method: Composition-based stats. Identities = 216/807 (26%), Positives = 349/807 (43%), Gaps = 73/807 (9%) Query: 72 PQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAGA 131 P+ + S L + ++ LA R + E +LA ++ A ++KA Sbjct: 14 PEEQEHAQVPSFSSTLEQAIHAALALANARRHELATLEHLLLALIDEPD-AARVMKACSV 72 Query: 132 TTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEI--RR 189 ++ + + + + + +A+ GR E Sbjct: 73 DLEDLKKTLTDFIDDDLSTLVTSVEGSEAVPTAAFQ-RVIQRAAIHVQSSGRTEVTGANV 131 Query: 190 TIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGA 249 + + R N + E + + V +A + + V GA Sbjct: 132 LVAIFAERESNAAYFLQEQDMTRYDAVNFIAHGVAKDP-----------SYGESRPVQGA 180 Query: 250 KYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELH 309 E + G + A + V L I G +D P + R Sbjct: 181 DEPQETPKAEAGEAKESALSKYCVDLNIK---------ARKGDVD------PLIGR---- 221 Query: 310 CVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPA 369 E + I+ R+ + V +P V T AI GL + ++ A Sbjct: 222 ------EAEVERAIQVLCR-RRKNNPLLVGDPGVGKT-AIAEGLAWKIIKKEVPEVLSGA 273 Query: 370 IVAAATLSH-----RYIADRQLPDKA-----------IDLIDEAASSIRM------QIDS 407 + + + RY D + KA I IDE + I +D+ Sbjct: 274 TIFSLDMGALLAGTRYRGDFEERLKAVVKELEDHPDAILFIDEIHTVIGAGATSGGAMDA 333 Query: 408 KPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKA 467 L ++ + L +++ E + + K Sbjct: 334 SNLLKPALQGGKLRCMGSTTYKEFRQHFEKDRALSRRFQKIDVNEPSVPDAIKILMGLKP 393 Query: 468 SLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLL 527 ++ + K A+E A R + ++ + I E + + K + Sbjct: 394 HFEEHHELRYTADAIKSAVELASRYINDRKLPDSAIDVIDEAGAAQHLVSDSKRKKV--- 450 Query: 528 RNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRS 587 + EI V+A+ IP + + + E L +E+ L V GQ++A++A+S +I+ + Sbjct: 451 ---LGTKEIEAVVAKIARIPPRNVSKDDAETLRDLERTLKRLVFGQDKAIEALSASIKLA 507 Query: 588 RAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLV 647 RAGL +P +PIG++LF GPTGVGKTE+ K LA + ++R DMSE+MEKH+VSRL+ Sbjct: 508 RAGLREPEKPIGNYLFTGPTGVGKTEVAKQLAATL---GVELLRFDMSEYMEKHAVSRLI 564 Query: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTV 707 GAPPGYVG+++GG LT+ V + P+ V+LLDE+EKAHPDV+NILLQV+D G+LTD GR V Sbjct: 565 GAPPGYVGFDQGGMLTDGVDQHPHCVLLLDEIEKAHPDVYNILLQVMDHGKLTDHNGRAV 624 Query: 708 DFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLG 767 DFRN ++IMTSN+G+ + + V F PEF NR+D V+ F PLG Sbjct: 625 DFRNVILIMTSNVGAADMAKEAIGFGRERRTGEDTAAVERTFTPEFRNRLDAVISFAPLG 684 Query: 768 EQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIEN 827 + I + + + +L +L +R I ++ EA L E GYD GARPL R IQ+ I+ Sbjct: 685 REIILQVVEKFVLQLEAQLIDRNVHIELTPEAAAWLGEKGYDDKMGARPLGRVIQEHIKK 744 Query: 828 PLAQQILSGELVPGKVIRLEVNEDRIV 854 PLA+++L G+L G ++++ V +D IV Sbjct: 745 PLAEELLFGKLTKGGLVKVGVKDDAIV 771 Score = 355 bits (910), Expect = 5e-96, Method: Composition-based stats. Identities = 186/578 (32%), Positives = 282/578 (48%), Gaps = 43/578 (7%) Query: 24 HDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQALN---RLPQVEGTGGD 80 ++ HL+ AL+++ + ++ + ++ L+ + ++ G + Sbjct: 43 RRHELATLEHLLLALIDEP--DAARVMKACSVDLEDLKKTLTDFIDDDLSTLVTSVEGSE 100 Query: 81 VQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAG---------- 130 P+ RV+ Q G ++ ++A R + A Sbjct: 101 AVPTAAFQRVIQRAAIHVQSSGRTEVTGANVLVAIFAERESNAAYFLQEQDMTRYDAVNF 160 Query: 131 --------ATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIG 182 + E+ + E + AL KY +DL +A +G +DP+IG Sbjct: 161 IAHGVAKDPSYGESRPVQGADEPQETPKAEAGEAKESALSKYCVDLNIKARKGDVDPLIG 220 Query: 183 RDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDM 242 R+ E+ R IQVL RR KNNP+L+G+PGVGKTAI EGLA +II EVPE L G + +LDM Sbjct: 221 REAEVERAIQVLCRRRKNNPLLVGDPGVGKTAIAEGLAWKIIKKEVPEVLSGATIFSLDM 280 Query: 243 GALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGK-ADGAMDAGNMLKP 301 GAL+AG +YRG+FEERLK V+ +L + ILFIDE+HT++GAG + GAMDA N+LKP Sbjct: 281 GALLAGTRYRGDFEERLKAVVKELEDHP-DAILFIDEIHTVIGAGATSGGAMDASNLLKP 339 Query: 302 ALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHH 361 AL G+L C+G+TT E+RQ+ EKD AL RRFQK+ V EPSV D I IL GLK +E HH Sbjct: 340 ALQGGKLRCMGSTTYKEFRQHFEKDRALSRRFQKIDVNEPSVPDAIKILMGLKPHFEEHH 399 Query: 362 HVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQ 421 ++ T AI +A L+ RYI DR+LPD AID+IDEA ++ + DSK +++ Sbjct: 400 ELRYTADAIKSAVELASRYINDRKLPDSAIDVIDEAGAAQHLVSDSKRKKVLGTKEI--- 456 Query: 422 LKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQ 481 + + K + + E L D ER L + + A ++ Sbjct: 457 ----EAVVAKIARIPPRNVSKDDAETLRDLERTLKRLVFGQDK------AIEALSASIKL 506 Query: 482 AKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLA 541 A+ + + + + E+ KQL A + LLR +++ ++ Sbjct: 507 ARAGLREPEKPIGNYLFTGPTGVGKTEVAKQLAATL-----GVELLRFDMSEYMEKHAVS 561 Query: 542 RWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDA 579 R G P + + L + H V+ +E A Sbjct: 562 RLIGAPPGYVGFDQGGMLTDGVDQHPHCVLLLDEIEKA 599 >UniRef50_C6V4H7 ATP-dependent Clp protease, ATP-binding subunit ClpA n=2 Tax=Neorickettsia RepID=C6V4H7_NEORI Length = 740 Score = 359 bits (921), Expect = 3e-97, Method: Composition-based stats. Identities = 178/581 (30%), Positives = 292/581 (50%), Gaps = 34/581 (5%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 ++ + L +A LA + ++ HL+ AL E VS + +++ +N +LR + Sbjct: 2 ISPSLENTLQNALVLARSFSHSYVTLEHLLLALTEDEE--VSRIASNSSMNFAKLRDSLI 59 Query: 66 QALN------RLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESR 119 L+ R ++P+ L RV+ A I+ ++ + Sbjct: 60 HFLSTAQFFARFSNGCVDIAKIKPTLGLRRVIQRTKIHANIAELGQITGLHVLIELFCEQ 119 Query: 120 GTLA-DILKAAGATTANITQAIEQMRGGESVNDQGAEDQR-------QALKKYTIDLTER 171 + A L + T + + + S + LK+Y D+ E Sbjct: 120 DSYAFSFLTESNITLVELMSHVMRSHKCGSTQSTSTSNTDILRSADLDNLKEYCTDMNEL 179 Query: 172 AEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEG 231 A QGK+D +I R +EI RTI++L RRTKNNP+ +GEPGVGKTAIVEGL I++G VP+ Sbjct: 180 AIQGKIDKLIDRKKEIERTIEILLRRTKNNPIYVGEPGVGKTAIVEGLVHAIVSGNVPQK 239 Query: 232 LKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGK-AD 290 LK RV AL +G+L+AG +YRG+FEER++ V+N+++ + N ILFIDE+HT+VGAG ++ Sbjct: 240 LKNTRVYALKIGSLLAGTRYRGDFEERIRTVMNEISSSK-NTILFIDEIHTIVGAGSTSN 298 Query: 291 GAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAIL 350 G++DAGN+LKP L +G L C+GATT EY + EKDAAL+RRFQ++ + EPS+ DT+ I+ Sbjct: 299 GSIDAGNLLKPFLTKGPLRCIGATTYREYSTHFEKDAALDRRFQRIEIEEPSISDTLNII 358 Query: 351 RGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPE 410 G K YE H V T ++ L+HRYI +R PDKAIDL+D+ + +++ Sbjct: 359 DGTKSYYEDFHRVHYTKASLNEIVNLAHRYIPNRSFPDKAIDLMDDLGA----SYNAELF 414 Query: 411 ELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLS 470 ++ + R I +K ++ L K + + + E L+ ER A + Sbjct: 415 DVKKRRDRKIDIKYVRETLAKRFNIPVAQLNYTVEEILTSLERNLKT------AIFDQDN 468 Query: 471 GTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNK 530 + + L + ++ + + GK EL KQ+ ++ +R Sbjct: 469 VIEQVVYSLRPGLLGLKGEKPLASYLFGGSTGVGK-TELAKQIAKNLCMQ-----FVRID 522 Query: 531 VTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVI 571 +++ ++R G P + + + + + +I Sbjct: 523 MSEYMEGHAVSRLIGAPPGYVGHDKGSFIAEILFKQGSSLI 563 Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats. Identities = 174/796 (21%), Positives = 300/796 (37%), Gaps = 81/796 (10%) Query: 83 PSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAGATTANITQAIEQ 142 S L L LA+ ++++ E +LA E ++ I + A + ++ Sbjct: 2 ISPSLENTLQNALVLARSFSHSYVTLEHLLLALTEDEE-VSRIASNSSMNFAKLRDSLIH 60 Query: 143 MRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNP 202 + + K+ P +G I+RT + N Sbjct: 61 FLSTAQF--------------FARFSNGCVDIAKIKPTLGLRRVIQRT------KIHANI 100 Query: 203 VLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGV 262 +G+ G ++E ++ ++ L M ++ K Sbjct: 101 AELGQI-TGLHVLIELFCEQDSYAFSFLTESNITLVEL-MSHVMRSHKCG---------- 148 Query: 263 LNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQY 322 IL +L + + + + R + E + Sbjct: 149 STQSTSTSNTDILRSADLDNLKEYCTDMNELAIQGKIDKLIDRKK----------EIERT 198 Query: 323 IEKDAALERRF--QKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSH-- 378 IE L RR ++V EP V T AI+ GL + Q V A + Sbjct: 199 IE---ILLRRTKNNPIYVGEPGVGKT-AIVEGLVHAIVSGNVPQKLKNTRVYALKIGSLL 254 Query: 379 ---RY-----------IADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKL 424 RY + + I IDE + + S + K Sbjct: 255 AGTRYRGDFEERIRTVMNEISSSKNTILFIDEIHTIVGAGSTSNGSIDAGNLLKPFLTKG 314 Query: 425 EQQAL------MKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAE 478 + + + LD + + +E S+ K+ + Sbjct: 315 PLRCIGATTYREYSTHFEKDAALDRRFQRIEIEEPSISDTLNIIDGTKSYYEDFHRVHYT 374 Query: 479 LEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAE 538 + A R + + +L A K K+ + E Sbjct: 375 KASLNEIVNLAHRYIPNRSFPDKAIDLMDDLGASYNAELFDVKKRR---DRKIDIKYVRE 431 Query: 539 VLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPI 598 LA+ IPV+++ + E L +E+ L + Q+ ++ V ++R GL +P+ Sbjct: 432 TLAKRFNIPVAQLNYTVEEILTSLERNLKTAIFDQDNVIEQVVYSLRPGLLGLKG-EKPL 490 Query: 599 GSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEE 658 S+LF G TGVGKTEL K +A + VRIDMSE+ME H+VSRL+GAPPGYVG+++ Sbjct: 491 ASYLFGGSTGVGKTELAKQIAKNLC---MQFVRIDMSEYMEGHAVSRLIGAPPGYVGHDK 547 Query: 659 GGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTS 718 G ++ E + ++ S+IL DE+EKAH D NILLQ+LD G +TD G+ F+N +++ T+ Sbjct: 548 GSFIAEILFKQGSSLILFDEIEKAHADFQNILLQILDYGCITDSTGKKSRFKNCIMVCTT 607 Query: 719 NLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQ 778 N+GS I+ K + F E ++R+D +VF+ L + + I Sbjct: 608 NVGSTFIENNSLGFTQDGKKTGKEAQFASFFNKELLDRLDLAIVFNTLDKNSVEKIINKS 667 Query: 779 LKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGEL 838 + LEERG ++ ++DE +K L AR ++R I+ I ++ ++L + Sbjct: 668 ATEIRALLEERGIKLSLTDEVVKSLVARHSSGKISARTIERTIRNDIMQAVSDRMLRSKT 727 Query: 839 VPGKVIRLEVNEDRIV 854 I L + + +V Sbjct: 728 SE---IELTIKDGCLV 740 >UniRef50_A3DES0 ATP-dependent Clp protease ATP-binding subunit ClpA n=4 Tax=Clostridium RepID=A3DES0_CLOTH Length = 776 Score = 359 bits (920), Expect = 4e-97, Method: Composition-based stats. Identities = 185/619 (29%), Positives = 302/619 (48%), Gaps = 63/619 (10%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M RL + L A + A ++F P H++ A L + G ++ + G + Sbjct: 1 MM--RLDDVANKILIAAYNEAKHQKHEFFTPEHILYASLFFDEG--RDIIENCGGKVEDI 56 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG 120 + D+ + R + S + V+ G +I ++A + Sbjct: 57 KKDLLEFF-RNNMPIVENHEPIESLGINSVMQATAYQCIAAGREYIRIGDIIVALYGEKE 115 Query: 121 TLAD-ILKAAGATTANITQAIEQMRGGESVNDQG-------------------------- 153 + A IL+ G ++ + I N + Sbjct: 116 SFASYILQKNGIKKLDVLKYISHGVSLVPKNMETSLKSLETDTYLEAYQYADDWEYDYEY 175 Query: 154 ------------AEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNN 201 + + L+ +TIDLTE+A +GK+DP+IGR++ + RTIQVL RR KNN Sbjct: 176 EDIDEDEDIDEESSSKSNFLEHFTIDLTEKARKGKIDPLIGREDILERTIQVLSRRLKNN 235 Query: 202 PVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKG 261 P+ +G+PGVGKTAI EGLA+ I+ +VP+ LKG ++ LDMG+++AG KYRG+FEER+K Sbjct: 236 PIHVGDPGVGKTAITEGLARLIVEDKVPKSLKGSKIYYLDMGSMLAGTKYRGDFEERIKK 295 Query: 262 VLNDLAKQEGNVILFIDELHTMVGAGK-ADGAMDAGNMLKPALARGELHCVGATTLDEYR 320 VLN++ + + I++IDE+HT+VGAG +DGAMDA N++KP L +G L +G+TT +EY+ Sbjct: 296 VLNEI-QNQPKAIVYIDEIHTIVGAGAVSDGAMDASNIIKPFLTQGTLRFIGSTTYEEYK 354 Query: 321 QYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRY 380 +Y EKD AL RRFQK+ V EPS++DT IL+GLK+RYE +H V+ TD A+ AA LS +Y Sbjct: 355 KYFEKDRALSRRFQKIDVPEPSIDDTFKILKGLKDRYEEYHKVKYTDSALRLAAELSAKY 414 Query: 381 IADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKR 440 I DR LPDKAID+IDE + +R+ + + + ++ +E+ Sbjct: 415 IQDRHLPDKAIDVIDETGAYVRLHAKDEDKVITIKNKD-----IERTVSAIARIPIQSVS 469 Query: 441 LDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSE 500 D +++ + + S + + KA + + + A + ++ Sbjct: 470 RDEISKLKNLDVKLKSTIFGQDKAIDTVVQAIKRSR------------AGFNENEKPVAS 517 Query: 501 LQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLL 560 L + + K A + +R +++ + ++R G P + E L Sbjct: 518 LLFVGPTGVGKTELAKQLSLHLGIPFIRFDMSEYQEKHTVSRLIGAPPGYVGYEEGGLLT 577 Query: 561 RMEQELHHRVIGQNEAVDA 579 ++ H V+ +E A Sbjct: 578 DAIRKTPHCVLLLDEIEKA 596 Score = 336 bits (861), Expect = 2e-90, Method: Composition-based stats. Identities = 184/806 (22%), Positives = 349/806 (43%), Gaps = 66/806 (8%) Query: 82 QPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAGATTANITQAIE 141 + ++L A+ + F + E + A+L DI++ G +I + + Sbjct: 3 RLDDVANKILIAAYNEAKHQKHEFFTPEHILYASLFFDE-GRDIIENCGGKVEDIKKDLL 61 Query: 142 QMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQR--RTK 199 + + + ++ I+ +A I E R ++ K Sbjct: 62 EFFRNNMPI----VENHEPIESLGINSVMQAT---AYQCIAAGREYIRIGDIIVALYGEK 114 Query: 200 NNPV--LIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEE 257 + ++ + G+ K +++ ++ + VP+ ++ + +L+ + +Y ++E Sbjct: 115 ESFASYILQKNGIKKLDVLKYISHGV--SLVPKNME-TSLKSLETDTYLEAYQYADDWEY 171 Query: 258 RLKGVLNDLAKQEGNVIL----FIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGA 313 + D + F++ + G +D P + R + + Sbjct: 172 DYEYEDIDEDEDIDEESSSKSNFLEHFTIDLTEKARKGKID------PLIGRED---ILE 222 Query: 314 TTLDEYRQYIEKDAALERRFQKVFVAEP-------SVEDTIAILRGLKERYELHHHVQIT 366 T+ + ++ + + V +P + I+ + + Sbjct: 223 RTIQVLSRRLKNNP--------IHVGDPGVGKTAITEGLARLIVEDKVPKSLKGSKIYYL 274 Query: 367 DPAIVAAATLS--------HRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRR 418 D + A T + + + Q KAI IDE + + S + Sbjct: 275 DMGSMLAGTKYRGDFEERIKKVLNEIQNQPKAIVYIDEIHTIVGAGAVSDGAMDASNIIK 334 Query: 419 IIQLKLEQQALMKESDEASKKRLDMLN------EELSDKERQYSELEEEWKAEKASLSGT 472 + + + + E KK + +++ E + + K K Sbjct: 335 PFLTQGTLRFIGSTTYEEYKKYFEKDRALSRRFQKIDVPEPSIDDTFKILKGLKDRYEEY 394 Query: 473 QTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVT 532 +K ++A E + + + + I E + + E K + + Sbjct: 395 HKVKYTDSALRLAAELSAKYIQDRHLPDKAIDVIDETGAYVRLHAKDEDKVI-----TIK 449 Query: 533 DAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLA 592 + +I ++ IP+ + E KL ++ +L + GQ++A+D V AI+RSRAG Sbjct: 450 NKDIERTVSAIARIPIQSVSRDEISKLKNLDVKLKSTIFGQDKAIDTVVQAIKRSRAGFN 509 Query: 593 DPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPG 652 + +P+ S LF+GPTGVGKTEL K L+ + +R DMSE+ EKH+VSRL+GAPPG Sbjct: 510 ENEKPVASLLFVGPTGVGKTELAKQLSLHL---GIPFIRFDMSEYQEKHTVSRLIGAPPG 566 Query: 653 YVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNT 712 YVGYEEGG LT+A+R+ P+ V+LLDE+EKAHPD++N+LLQV+D LTD G+ DFRN Sbjct: 567 YVGYEEGGLLTDAIRKTPHCVLLLDEIEKAHPDIYNVLLQVMDYAVLTDNNGKKADFRNV 626 Query: 713 VVIMTSNLGSDLIQERFGELDYAHMKELVL-GVVSHNFRPEFINRIDEVVVFHPLGEQHI 771 ++IMTSN G+ + D ++ + V F PEF NR+D++VVF+ + E+ Sbjct: 627 ILIMTSNAGAREVGRTLIGFDSRNVDRSAMTKEVERIFSPEFRNRLDDIVVFNHINEEMA 686 Query: 772 ASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQ 831 I + + + ++L+ + ++ +++ K +++ G +YGAR + R +Q +I+ Sbjct: 687 LLITKKAINQFKEKLKTKNIKLKVTERCCKWIAQKGLSSIYGAREILRYVQDKIKTYFVD 746 Query: 832 QILSGELVPGKVIRLEVNEDRIVAVQ 857 ++L GEL G ++V + I + Sbjct: 747 EVLFGELSKGGTAIIDVVDGEIKISK 772 >UniRef50_C9PUC6 ATP-dependent Clp protease subunit n=1 Tax=Prevotella sp. oral taxon 472 str. F0295 RepID=C9PUC6_9BACT Length = 753 Score = 358 bits (918), Expect = 6e-97, Method: Composition-based stats. Identities = 176/597 (29%), Positives = 291/597 (48%), Gaps = 29/597 (4%) Query: 7 TNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQ 66 ++ L A + + + N+F+ P HL+ AL NQ+ S+ L ++G + L ++ Sbjct: 7 SHDTDQVLNGALNYCMLYRNEFVTPEHLLMALTNQDNFSI--ALDASGGDTLALMAQLDG 64 Query: 67 ALNRLPQVEGTGGDVQ-PSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADI 125 + ++ + V S L VL+ KLA + V+ + + A Sbjct: 65 VVGKMETMPADWHHVPDNSVLLSEVLSNAQKLAMMADVETLQVPHLVMGLINLENSDAAY 124 Query: 126 L--KAAGATTANI---TQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPV 180 L K G N + S ++ + ++ +P+ Sbjct: 125 LLNKQLGENATNFVAELVELYTNDARMSFFGGEEGEEEENEPWRSLVTCVNDTYKNHNPL 184 Query: 181 IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL 240 IGR+EE++RTIQVL R+ KNNP+ +GEPGVGKT++V GLA I G+VP+ L+G RV + Sbjct: 185 IGREEELQRTIQVLCRKEKNNPLHVGEPGVGKTSLVYGLAAMIERGDVPQRLQGCRVYQM 244 Query: 241 DMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKA-DGAMDAGNML 299 DMG ++AG +YRG+ E+R+K V++ L + EGN IL+IDE+H +VGAG++ +G+MDA NML Sbjct: 245 DMGTMLAGTQYRGDLEKRIKQVMDGLLE-EGNTILYIDEIHNLVGAGRSGEGSMDASNML 303 Query: 300 KPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYEL 359 KP L G++ +G+TT EY +Y K A + RRFQ++ V EP+ E+ I IL GLK +YE Sbjct: 304 KPYLEGGDVRFIGSTTYAEYNRYFAKSAGIVRRFQQIDVPEPTPEEAIKILNGLKGQYEK 363 Query: 360 HHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRI 419 H+V+ + I A S +Y+ DR LPDKAIDLIDEA + Q+ P + ++D+ + Sbjct: 364 FHNVRYSPGVIEFAVRASAKYVNDRHLPDKAIDLIDEAGAY--RQMHPLPTKRQKVDKAL 421 Query: 420 IQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAEL 479 + L + ++ +L E +R ++ + +A + QT KA L Sbjct: 422 VSDVLTKVCKVQAVALKDDGNEALLTLE----KRMKEQIYGQNQAVELVTQAIQTAKAGL 477 Query: 480 EQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEV 539 + + VG + K A + L+R +++ Sbjct: 478 TEEGKPLSAMLFVGPTG------------VGKTEVARVLAHELGIELVRFDMSEYTEKHA 525 Query: 540 LARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNR 596 +A+ G P + + L +++ + V+ +E ++ I + D R Sbjct: 526 VAKLIGSPAGYVGYEDGGLLTDAIRKIPNCVLLLDE-IEKAHADIYNILLQVMDYAR 581 Score = 309 bits (791), Expect = 3e-82, Method: Composition-based stats. Identities = 137/399 (34%), Positives = 223/399 (55%), Gaps = 8/399 (2%) Query: 453 RQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQ 512 R++ +++ + ++ +K + E+ + R S +K Sbjct: 335 RRFQQIDVPEPTPEEAIKILNGLKGQYEKFHNVRYSPGVIEFAVRASAKYVNDRHLPDKA 394 Query: 513 L----EAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHH 568 + EA + + R KV A +++VL + + + + E LL +E+ + Sbjct: 395 IDLIDEAGAYRQMHPLPTKRQKVDKALVSDVLTKVCKVQAVALKDDGNEALLTLEKRMKE 454 Query: 569 RVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEA 628 ++ GQN+AV+ V+ AI+ ++AGL + +P+ + LF+GPTGVGKTE+ + LA+ + Sbjct: 455 QIYGQNQAVELVTQAIQTAKAGLTEEGKPLSAMLFVGPTGVGKTEVARVLAHEL---GIE 511 Query: 629 MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFN 688 +VR DMSE+ EKH+V++L+G+P GYVGYE+GG LT+A+R+ P V+LLDE+EKAH D++N Sbjct: 512 LVRFDMSEYTEKHAVAKLIGSPAGYVGYEDGGLLTDAIRKIPNCVLLLDEIEKAHADIYN 571 Query: 689 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE-RFGELDYAHMKELVLGVVSH 747 ILLQV+D RLTD +G+ DFRN V+IMTSN G+ + G E ++ V Sbjct: 572 ILLQVMDYARLTDNKGQKADFRNVVLIMTSNAGAQFASQANVGFASNVSRGEAMMVQVKK 631 Query: 748 NFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENG 807 F+PEFINR+ VVF + E I + ++ L ++L R E+ + A L G Sbjct: 632 TFKPEFINRLSATVVFRDMDEAMAHLILKKKINALQQQLVARNVELTLDAAAENYLLRLG 691 Query: 808 YDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRL 846 + P+YGAR + R I Q++ L +++L G+L G + Sbjct: 692 FTPLYGAREMDRVIAAQLKPLLTREMLFGKLKKGGKAIV 730 >UniRef50_B7GCV2 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7GCV2_PHATR Length = 683 Score = 357 bits (917), Expect = 7e-97, Method: Composition-based stats. Identities = 165/419 (39%), Positives = 252/419 (60%), Gaps = 20/419 (4%) Query: 452 ERQYSELEEEWKAEKASLSGTQTIKAELEQAK------IAIEQARRVGDLARMSELQYGK 505 ER+ + + + ++ Q +++ E+ A+ A + D K Sbjct: 264 ERRLQPVMVKEPSVVQTIDILQAVQSNYEKHHGVTYTSAALNAAATLSDRYMTDRFLPDK 323 Query: 506 IPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQE 565 +L + A LE + + +VT+ +A V++ W+GIP+ ++ E ++L +E E Sbjct: 324 ALDLLDEAGAIAHLE-EPDEDVTPEVTEHTVAMVISEWSGIPMGKLETQEMDRLQALEGE 382 Query: 566 LHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDS 625 + RV GQ A+ V+ A+RR+R+GL DP RP+ SFLF GPTG GKTELCK LA + S Sbjct: 383 MGRRVKGQGRAIRGVARAVRRARSGLRDPRRPVASFLFCGPTGTGKTELCKTLAETYYGS 442 Query: 626 DEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPD 685 ++ M+RIDMSE+MEKHSVSRL G PPGY+GYEEGG LTEAVRR P+SV+LLDE+EKAH D Sbjct: 443 EKDMIRIDMSEYMEKHSVSRLTGPPPGYIGYEEGGQLTEAVRRAPHSVVLLDELEKAHGD 502 Query: 686 VFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD----------YA 735 V NILLQV++DG LTDG+GRT++F+N++++MTSN+GS I E YA Sbjct: 503 VLNILLQVMEDGMLTDGKGRTINFKNSILVMTSNVGSRRILEVARSGRDSIVQKDHYLYA 562 Query: 736 HMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIH 794 + ++V + +PE +NRIDE++VF PL + IA++ + ++ +R L+E+ E+ Sbjct: 563 ELAQVVKEELEREMKPELLNRIDEIIVFSPLSTGDLWMIAELIVAKISERALKEQKLELK 622 Query: 795 ISDEALKLLSENGY--DPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNED 851 I ++ + G +GARP++RA Q+ +E+ L+ I+ G L G+ + + Sbjct: 623 IDRSVIERVMAEGSANADQFGARPMRRAAQRFVEDSLSDAIIQGFLQEGEGATVSLASK 681 Score = 327 bits (839), Expect = 8e-88, Method: Composition-based stats. Identities = 185/509 (36%), Positives = 260/509 (51%), Gaps = 29/509 (5%) Query: 82 QPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALE-SRGTLADILKAAGATTA------ 134 +DL R L KLA + G + S+ LA LE S G A ++K Sbjct: 1 PFGKDLKRTLVQAGKLADQMGSTTVGSQHVFLALLEYSEGGWAVLVKMNVLDDTVTALDV 60 Query: 135 -----NITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRR 189 E V G + L + +DLT++AE G LDPV GRD+E R Sbjct: 61 CESLLQNMADQPDQARRELVTGAGGSGKMPTLTECGVDLTQQAEDGLLDPVYGRDDETRA 120 Query: 190 TIQVLQRRTKNNPVLIGEP-GVGKTAIVEGLAQRIINGEV-PEGLKGRRVLALDMGALVA 247 ++ L RR KNN LIGEP GVGKTAI EG+AQ +++ ++ P LKG R+ +L++ LVA Sbjct: 121 CVRTLIRRRKNNVCLIGEPVGVGKTAIAEGVAQILVDEKLCPARLKGHRLFSLELSNLVA 180 Query: 248 GAKYRGEFEERLKGVLNDLAKQEGN-VILFIDELHTMVGAGKADGAMDAGNMLKPALARG 306 G KYRGEFEERL+ ++ ++ + ILFIDE+H +VGAG A+G MDA N+LKPALARG Sbjct: 181 GTKYRGEFEERLQSIIKEVTDPKAPPTILFIDEIHNLVGAGAAEGGMDAANLLKPALARG 240 Query: 307 ELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQIT 366 EL +GATT+ EYR+YIEKDAALERR Q V V EPSV TI IL+ ++ YE HH V T Sbjct: 241 ELQLIGATTIMEYRKYIEKDAALERRLQPVMVKEPSVVQTIDILQAVQSNYEKHHGVTYT 300 Query: 367 DPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQ 426 A+ AAATLS RY+ DR LPDKA+DL+DEA + ++ + + + + + E Sbjct: 301 SAALNAAATLSDRYMTDRFLPDKALDLLDEAGAIAHLEEPDEDVTPEVTEHTVAMVISEW 360 Query: 427 QALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAI 486 + E + +D L + R+ K + + + +A+ + Sbjct: 361 SGIPMGKLETQE--MDRLQALEGEMGRRV----------KGQGRAIRGVARAVRRARSGL 408 Query: 487 EQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGI 546 RR EL K L K ++R +++ ++R TG Sbjct: 409 RDPRRPVASFLFCGPTGTGKTELCKTLAETYYGSEKD--MIRIDMSEYMEKHSVSRLTGP 466 Query: 547 PVSRMMESEREKLLRMEQELHHRVIGQNE 575 P + E +L + H V+ +E Sbjct: 467 PPGYIGYEEGGQLTEAVRRAPHSVVLLDE 495 >UniRef50_A6KY28 ATP-dependent Clp protease, ATP-binding subunit ClpA n=11 Tax=Bacteroides RepID=A6KY28_BACV8 Length = 742 Score = 356 bits (914), Expect = 2e-96, Method: Composition-based stats. Identities = 175/591 (29%), Positives = 280/591 (47%), Gaps = 40/591 (6%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M + T+ A A AQS A+ + ++FI P HL+SALL Q L +L Sbjct: 1 MDIPN-TDSVNYAFASAQSQAMQYRHEFITPEHLLSALLEQ--VPFQKALAECFCTPEEL 57 Query: 61 RTDINQALNR--LPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALES 118 I++ L++ + +++ S L +L + V L+ Sbjct: 58 SQSISEYLSKKVERVPQEIEYELEISGQLSELLQYAYMTISHSSAEEMDVPHLVQGMLQL 117 Query: 119 RGTLADIL--KAAGATTANITQA---IEQMRGGESVNDQGAEDQRQALKKYTIDLTERAE 173 + A L + G + + +++ + + Y L E + Sbjct: 118 EDSWAGYLLKETVGEDMPEFLSSLISNYEHMNQFQEETSSEQEKSEPWRNYVTCLNEGLQ 177 Query: 174 QGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLK 233 +P+IGR+ E+ RTIQVL R+ KNNP+ +GEPGVGKTA+V GLA RI G VPE L Sbjct: 178 DR--NPLIGRNVELERTIQVLCRKEKNNPLHVGEPGVGKTALVYGLAARIEAGNVPERLT 235 Query: 234 GRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKA-DGA 292 G R+ LD+G L+AG +YRGEFE+RLK ++ + K EG+ I++IDE+H ++GAG+ DG+ Sbjct: 236 GCRIYELDLGNLLAGTQYRGEFEKRLKAIMEGIRK-EGHAIVYIDEIHNLIGAGRTGDGS 294 Query: 293 MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRG 352 MDA NMLKP L GE+ +G+TT +E+ +Y + L RRFQ++ + EP +E+TI I+ G Sbjct: 295 MDASNMLKPYLEGGEIRFIGSTTYEEFNRYFSRSRGLVRRFQQIDIQEPGIEETIHIVEG 354 Query: 353 LKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEEL 412 LKERYE H V + I A T + RYI+DR LPDKAIDL+DEA + + + Sbjct: 355 LKERYETFHGVVYEEGVIAYAVTAAARYISDRFLPDKAIDLVDEAGAYREIHPTDTETQT 414 Query: 413 DR----LDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKAS 468 D K++ A+ +E + + + ++ ++ +E ++ E + KA Sbjct: 415 VDKALITDILARICKVDVLAMKEEDNATLETLHERISAKIYGQEEAVCQVVEAVQMAKAG 474 Query: 469 LSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLR 528 L ++ L + + K A + L R Sbjct: 475 LLDENKP----------------------LASLLFVGPTGVGKTEVAKVLASELGIALQR 512 Query: 529 NKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDA 579 +++ +A+ G P + + L ++ + V+ +E A Sbjct: 513 FDMSEYTEKHTVAKLIGSPAGYIGYEDGGLLTDAIRKTPNCVLLLDEIEKA 563 Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 193/794 (24%), Positives = 314/794 (39%), Gaps = 80/794 (10%) Query: 80 DVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAGATTANITQA 139 D+ + + A + FI+ E + A L + L T ++Q+ Sbjct: 2 DIPNTDSVNYAFASAQSQAMQYRHEFITPEHLLSALL-EQVPFQKALAECFCTPEELSQS 60 Query: 140 IEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTK 199 I + + + + +L + A + +LQ Sbjct: 61 ISEYLSKKVERVPQEIEYELEISGQLSELLQYAYMTISHSSAEEMDVPHLVQGMLQLED- 119 Query: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259 + L + + ++PE L +L++ ++ +F+E Sbjct: 120 --------------SWAGYLLKETVGEDMPEFL----------SSLISNYEHMNQFQEET 155 Query: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319 + K E T + G D P + R T+ Sbjct: 156 SS---EQEKSEP-----WRNYVTCLNEGLQDRN--------PLIGRN---VELERTIQVL 196 Query: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHH------HVQITDPAIVAA 373 + + + + V EP V T A++ GL R E + +I + + Sbjct: 197 CRKEKNNP--------LHVGEPGVGKT-ALVYGLAARIEAGNVPERLTGCRIYELDLGNL 247 Query: 374 ATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKES 433 + Y + + KAI + ID + + Sbjct: 248 LAGTQ-YRGEFEKRLKAIMEGIRKEGHAIVYIDEIHNLIGAGRTGDGSMDASNMLKPYLE 306 Query: 434 DEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQ----- 488 + EE + + L ++ G + +E K E Sbjct: 307 GGEIRFIGSTTYEEFNRYFSRSRGLVRRFQQIDIQEPGIEETIHIVEGLKERYETFHGVV 366 Query: 489 --------ARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVL 540 A K +L + A ++ V A I ++L Sbjct: 367 YEEGVIAYAVTAAARYISDRFLPDKAIDLVDEAGAYREIHPTDTE--TQTVDKALITDIL 424 Query: 541 ARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGS 600 AR + V M E + L + + + ++ GQ EAV V A++ ++AGL D N+P+ S Sbjct: 425 ARICKVDVLAMKEEDNATLETLHERISAKIYGQEEAVCQVVEAVQMAKAGLLDENKPLAS 484 Query: 601 FLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG 660 LF+GPTGVGKTE+ K LA+ + A+ R DMSE+ EKH+V++L+G+P GY+GYE+GG Sbjct: 485 LLFVGPTGVGKTEVAKVLASEL---GIALQRFDMSEYTEKHTVAKLIGSPAGYIGYEDGG 541 Query: 661 YLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL 720 LT+A+R+ P V+LLDE+EKAHPD+FNILLQV+D LTD +GR D R+ ++IMTSN Sbjct: 542 LLTDAIRKTPNCVLLLDEIEKAHPDIFNILLQVMDYAVLTDNKGRKADCRHVILIMTSNA 601 Query: 721 GSDLIQERF-GELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQL 779 G+ + G E +L V F+PEFINR+ VVFH + + I +L Sbjct: 602 GAQFAHQASIGFSGQITAGEAMLKQVKKTFKPEFINRLSATVVFHDMDYGMASLILNKKL 661 Query: 780 KRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELV 839 L +L R + +S EA K L + G+ YGAR + R I Q++ L ++IL G L Sbjct: 662 NELKNKLSARHVGMELSPEAYKHLLKLGFTKEYGAREMDRVITSQLKPLLMREILFGTLK 721 Query: 840 PGKVIRLEVNEDRI 853 G +R+ + Sbjct: 722 TGGKVRVTAGNGEL 735 >UniRef50_B3ERL7 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ERL7_AMOA5 Length = 573 Score = 354 bits (909), Expect = 6e-96, Method: Composition-based stats. Identities = 189/503 (37%), Positives = 284/503 (56%), Gaps = 33/503 (6%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 LT+K + +A ++ AL + I PLH++ +L E +L + GI +LR Sbjct: 1 MPINLTHKAKEIIALSRKEALKLHSNSIRPLHILLGILQYESCLAYKILFALGIPMEELR 60 Query: 62 TDINQALNRLPQVE----GTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALE 117 + ++ + + + G ++ + ++ +L L + A+ I +E +LAAL+ Sbjct: 61 IALEKSEQQEHEEDMIDNGQVNGIKLTHEIESLLKLTQQYAKALKSEAIGTEHILLAALK 120 Query: 118 SRG-TLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQR------------------ 158 + IL T I + I G + Q E+ R Sbjct: 121 NADVHTKYILDQFNVTYEAIERVIVHRLGQYYIVAQEMEESRDDASENMDDSEDSTTSKH 180 Query: 159 --------QALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGV 210 L ++ DL++ AE+GKLDP+IGR +EI R Q+L RR KNN +LIGEPGV Sbjct: 181 KDIEKTRTPILDNFSRDLSKLAEEGKLDPIIGRKKEIERVAQILSRRRKNNALLIGEPGV 240 Query: 211 GKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQE 270 GKTAI EGLA +I+ G+V + L G+RV++LD+ ALVAG KYRG+FEER+K ++N+L K + Sbjct: 241 GKTAIAEGLALQIMQGKVAKPLLGKRVVSLDVAALVAGTKYRGQFEERIKAIMNELVKSK 300 Query: 271 GNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALE 330 VILFIDELHT+VGAG A G++DA N+LKPALARG++ C+GATTL EYRQYIEKD AL Sbjct: 301 -QVILFIDELHTIVGAGSAAGSLDAANILKPALARGDIQCIGATTLSEYRQYIEKDGALT 359 Query: 331 RRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKA 390 RRFQ V V ++ ++I IL LK+ YE +H V T I A L+ RYI++R LPDKA Sbjct: 360 RRFQSVRVEPTTIVESIEILNNLKDTYEEYHSVTYTPEVIKACVDLADRYISNRLLPDKA 419 Query: 391 IDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESD-EASKKRLDMLNEELS 449 ID++DE +S+ M P ++ +L I +K + ++ E + + D + Sbjct: 420 IDVMDEVGASVHMHNIQVPSKIAKLADNIELIKANKNKAVRNQKYEEAAQLRDQEKKLYE 479 Query: 450 DKERQYSELEEEWKAEKASLSGT 472 E + ++ E+E K+++ ++ Sbjct: 480 KFELEKTKWEQELKSKRYPITTL 502 >UniRef50_C5ZY74 ATP-dependent Clp protease, ATP-binding subunit ClpA n=2 Tax=Helicobacter RepID=C5ZY74_9HELI Length = 746 Score = 354 bits (909), Expect = 6e-96, Method: Composition-based stats. Identities = 177/584 (30%), Positives = 288/584 (49%), Gaps = 34/584 (5%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 ++ ++ + L AQS A ++++ H+ +LL+ + V + G N L+ Sbjct: 1 MIE-ISKELNYILQAAQSRAKHLGHEYLTLEHIFHSLLDSQT--VIKAIQECGGNIKALK 57 Query: 62 TDINQALNRLPQVEGTGGDVQP-SQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG 120 + I + L Q ++ + + RV+ + + + A LE Sbjct: 58 SQIERYLTHFLQSHPDASELPIETLAVTRVIEIMVSHVKGAQRKEAQVGDLLAAILEEDK 117 Query: 121 -TLADILKAAGATTANITQAIEQMRGGESVND--QGAEDQRQALKKYTIDLTERAEQGKL 177 +LKA G T NI + I + + + + Q L+KY I+LT+ A++GK+ Sbjct: 118 AFCTQLLKAQGITRLNILEYITENQDTQQAQKFEKDENKQESILEKYCINLTQEAKEGKI 177 Query: 178 DPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRV 237 DP+IGRD+EI R ++VL RR KNNP+L+GEPGVGKTAI EGLA I+ + L G + Sbjct: 178 DPIIGRDKEIERCLEVLLRRKKNNPLLVGEPGVGKTAIAEGLA--IVLNQENNPLFGNEI 235 Query: 238 LALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKAD-GAMDAG 296 L+MGALVAG KYRG+FE+R+K + ++ +++ NVILFIDE+H ++GAG + G+MDA Sbjct: 236 FMLNMGALVAGTKYRGDFEKRIKALSEEVLERK-NVILFIDEIHMLIGAGATNSGSMDAS 294 Query: 297 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKER 356 N+LKP L G+L C+GA+T EYR +++KD A RRF K+ V EPS E+ + IL+G+K+ Sbjct: 295 NLLKPMLGSGKLRCIGASTYAEYRNFLDKDKAFSRRFAKIDVDEPSQEEAVLILQGVKKY 354 Query: 357 YELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLD 416 YE HH+V + A LS RY+ DR LPDKAID+IDE ++ ++ S L + Sbjct: 355 YEKHHNVIYPLETLRLAVELSSRYLHDRFLPDKAIDVIDEVGAAYKLASKSGKVSLSSIK 414 Query: 417 RRIIQL-KLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTI 475 + + ++ K+ + K+ K L + ++ E+ K +A L Sbjct: 415 QMVAKMAKIPEIEATKDDKNLLKNLQKHLQSRIFGQDLAIKEIVTALKRNRAGLGAPNKP 474 Query: 476 KAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAE 535 + + + K A + + R +++ Sbjct: 475 ----------------------IGSFLFSGPSGVGKTELAKEIAKALGINFERIDMSEYM 512 Query: 536 IAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDA 579 + G P + + L M ++ H ++ +E A Sbjct: 513 EKYSSSGLIGAPAGYVGYDKGGILTEMIKKNPHTLLLLDEIEKA 556 Score = 332 bits (852), Expect = 3e-89, Method: Composition-based stats. Identities = 200/794 (25%), Positives = 340/794 (42%), Gaps = 94/794 (11%) Query: 81 VQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAGATTANITQAI 140 ++ S++L +L A+ G +++ E + L T+ ++ G + I Sbjct: 2 IEISKELNYILQAAQSRAKHLGHEYLTLEHIFHSLL-DSQTVIKAIQECGGNIKALKSQI 60 Query: 141 EQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKN 200 E+ + A + + R I+++ K Sbjct: 61 ERYLTHFLQSHPDASELPIETLA-----------------------VTRVIEIMVSHVKG 97 Query: 201 NPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLK 260 + G AI+E + LK + + L++ +Y E ++ + Sbjct: 98 AQRKEAQVGDLLAAILEE-----DKAFCTQLLKAQGITRLNI------LEYITENQDTQQ 146 Query: 261 GVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYR 320 + + + IL E + + +A + P + R + E Sbjct: 147 AQKFEKDENKQESIL---EKYCINLTQEAKEGK-----IDPIIGRDK----------EIE 188 Query: 321 QYIEKDAALERRF--QKVFVAEPSVEDTIAILRGLKERYELHHHVQITDP-------AIV 371 + +E L RR + V EP V T AI GL ++ + A+V Sbjct: 189 RCLEV---LLRRKKNNPLLVGEPGVGKT-AIAEGLAIVLNQENNPLFGNEIFMLNMGALV 244 Query: 372 AAATLSHRY------IADRQLPDK-------AIDLIDEAASSIRMQIDSKPEELDRLDRR 418 A + +++ L K I ++ A ++ +D+ L Sbjct: 245 AGTKYRGDFEKRIKALSEEVLERKNVILFIDEIHMLIGAGATNSGSMDASNLLKPMLGSG 304 Query: 419 IIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAE 478 ++ + K ++ E E + K + Sbjct: 305 KLRCIGASTYAEYRNFLDKDKAFSRRFAKIDVDEPSQEEAVLILQGVKKYYEKHHNVIYP 364 Query: 479 LEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAE 538 LE ++A+E + R + + I E+ + A++ KV+ + I + Sbjct: 365 LETLRLAVELSSRYLHDRFLPDKAIDVIDEVGAAYKLASK---------SGKVSLSSIKQ 415 Query: 539 VLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPI 598 ++A+ IP + ++ L +++ L R+ GQ+ A+ + A++R+RAGL PN+PI Sbjct: 416 MVAKMAKIPEIEATKDDKNLLKNLQKHLQSRIFGQDLAIKEIVTALKRNRAGLGAPNKPI 475 Query: 599 GSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEE 658 GSFLF GP+GVGKTEL K +A + RIDMSE+MEK+S S L+GAP GYVGY++ Sbjct: 476 GSFLFSGPSGVGKTELAKEIAKAL---GINFERIDMSEYMEKYSSSGLIGAPAGYVGYDK 532 Query: 659 GGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTS 718 GG LTE +++ P++++LLDE+EKAHPDV NI LQV+D+ +LTD G + DF + ++IMTS Sbjct: 533 GGILTEMIKKNPHTLLLLDEIEKAHPDVLNIFLQVMDNAKLTDNNGESADFSSVILIMTS 592 Query: 719 NLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQ 778 N+GS D + NF PEF NR+D +V F+PL E I I + Sbjct: 593 NVGSKEAPTLGFTQDSVA---KFNSAIKDNFTPEFRNRLDAIVAFNPLSETEILKIVEKN 649 Query: 779 LKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGEL 838 + L K++ + I + A + L++ GY+P GARPL IQ++I+NPL+ +L GEL Sbjct: 650 INDLNKQIAPKNIHILLDKSAKEQLAKLGYNPELGARPLGLVIQEKIKNPLSDLMLFGEL 709 Query: 839 VPGKVIRLEVNEDR 852 G + N+ Sbjct: 710 EKGGEVIFSYNKKS 723 >UniRef50_C5LIJ2 ATP-dependent Clp protease, putative n=3 Tax=Perkinsus marinus ATCC 50983 RepID=C5LIJ2_9ALVE Length = 895 Score = 351 bits (899), Expect = 9e-95, Method: Composition-based stats. Identities = 177/559 (31%), Positives = 264/559 (47%), Gaps = 23/559 (4%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 D L++ A+ AQ ++ + L+ L ++ G S LL AG+ +L+ Sbjct: 147 FDALSDSSARAIHRAQEESMNL--ATVPLEGLLIGLASERSGGASKLLREAGVQVAELKH 204 Query: 63 DINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLA-----ALE 117 G V ++V V+ C AQ I++E + Sbjct: 205 LAPLQAAPDLVSWGAVERVPLDDEVVEVIRGCVDKAQGP----ITTEALLEGVIGKMLAR 260 Query: 118 SRGTLADILKAAGATTANITQAIEQMRGGESVN-DQGAEDQRQALKKYTIDLTERAEQGK 176 G +++ + + + E+ V L+ +LT A +GK Sbjct: 261 PAGMEPELMGRLQSVLQRLQEWGEEDAEKIPVGGFVPGTSGGSVLESCGRNLTALAREGK 320 Query: 177 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRR 236 L +GRD EI R IQVL R TKNNPVL+GEPGVGKTA+ EG+A+ I GEVP L G Sbjct: 321 LLKCVGRDAEIGRMIQVLSRMTKNNPVLLGEPGVGKTAVAEGMAELIARGEVPTHLAGVA 380 Query: 237 VLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKA-DGAMDA 295 + + +G+L+AG KYRGEFEERLK ++ + +G +IL IDELHT+VGAG DGA+DA Sbjct: 381 IWDVSIGSLLAGTKYRGEFEERLKRLVKEATDADGKIILLIDELHTIVGAGATGDGAIDA 440 Query: 296 GNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKE 355 N+LKPAL+RGEL +GATT EY +YI KD ALERRFQ V V EP+ + +L G+ Sbjct: 441 ANILKPALSRGELRVIGATTQSEYDKYIAKDPALERRFQPVVVPEPTQAQAVDMLMGVAS 500 Query: 356 RYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRL 415 YE HH V+ TD AI A LS RYI R+LPD A D +DEAA+ R+Q ++P + Sbjct: 501 LYEEHHFVRFTDDAIEACVKLSSRYIPSRRLPDSAFDAMDEAAARKRIQQGARPSSRIEV 560 Query: 416 DRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTI 475 + + Q + + + ++ + L E + K ++++ Sbjct: 561 NANDVA-----QTVAQWTGIPLEELTKDESARLLHMEERLDSRVIGQKRATSAVA----R 611 Query: 476 KAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAE 535 + + +R EL K L E + ++R +++ Sbjct: 612 AIRRARVGVRGIGNKRPTACFLFCGPTGVGKTELSKALSDEYFGE-EGRNMIRLDMSEFM 670 Query: 536 IAEVLARWTGIPVSRMMES 554 +++ G P + Sbjct: 671 ERHSVSKLIGSPPGYVGYD 689 Score = 339 bits (869), Expect = 3e-91, Method: Composition-based stats. Identities = 193/588 (32%), Positives = 288/588 (48%), Gaps = 61/588 (10%) Query: 302 ALAR--GELHCVGATTLDEYRQYIEKDAALERRF---QKVFVAEPSVEDT---IAILRGL 353 ALAR L CVG I + + R V + EP V T + + Sbjct: 314 ALAREGKLLKCVG------RDAEIGRMIQVLSRMTKNNPVLLGEPGVGKTAVAEGMAELI 367 Query: 354 KERYELHH--HVQITDPAIVAAA----------TLSHRYIADRQLPD-KAIDLIDEAASS 400 H V I D +I + R + + D K I LIDE + Sbjct: 368 ARGEVPTHLAGVAIWDVSIGSLLAGTKYRGEFEERLKRLVKEATDADGKIILLIDELHTI 427 Query: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEE 460 + + + E + + + D + ER++ + Sbjct: 428 VGAGATGDGAIDAANILKPALSRGELRVIGATTQSE----YDKYIAKDPALERRFQPVVV 483 Query: 461 EWKAEKASLSGTQTIKAELEQAKI------AIEQARRVGDLARMSELQYGKIPELEKQLE 514 + ++ + + E+ AIE ++ S + + Sbjct: 484 PEPTQAQAVDMLMGVASLYEEHHFVRFTDDAIEACVKLSSRYIPSRRLPDSAFDAMDEAA 543 Query: 515 AATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574 A +++ R +V ++A+ +A+WTGIP+ + + E +LL ME+ L RVIGQ Sbjct: 544 ARKRIQQGARPSSRIEVNANDVAQTVAQWTGIPLEELTKDESARLLHMEERLDSRVIGQK 603 Query: 575 EAVDAVSNAIRRSRAGLAD--PNRPIGSFLFLGPTGVGKTELCKALANFMFDSD-EAMVR 631 A AV+ AIRR+R G+ RP FLF GPTGVGKTEL KAL++ F + M+R Sbjct: 604 RATSAVARAIRRARVGVRGIGNKRPTACFLFCGPTGVGKTELSKALSDEYFGEEGRNMIR 663 Query: 632 IDMSEFMEKHSVSRLVGAPPGYVGYEE--GGYLTEAVRRRPYSVILLDEVEKAHPDVFNI 689 +DMSEFME+HSVS+L+G+PPGYVGY+ GG LT+ VRR+P+S++L+DEVEKAHPDV NI Sbjct: 664 LDMSEFMERHSVSKLIGSPPGYVGYDSNSGGVLTDRVRRQPHSLVLIDEVEKAHPDVLNI 723 Query: 690 LLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNF 749 LLQV+DDGRLTD GR DF N +++MTSN+GS + + +F Sbjct: 724 LLQVMDDGRLTDSHGRLADFSNVILVMTSNVGSS------------------MEDLKRHF 765 Query: 750 RPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERG-YEIHISDEALKLLSENGY 808 RPEFINRIDEV+ F L E+ I I + + RL L+E+ ++ ++D L + GY Sbjct: 766 RPEFINRIDEVIAFDSLTEEDIVRIVGLYVSRLQAALKEQHSIDLKVTDGLTAALGKEGY 825 Query: 809 DPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAV 856 +GAR L R +Q +IE+P+A+ IL E+ G+ + + + +R + V Sbjct: 826 SAEFGARHLNRVMQARIEDPIAELILREEIHRGEELIADYDSERDMIV 873 >UniRef50_C8PIY8 ATP-dependent CLP protease ATP-binding subunit n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PIY8_9PROT Length = 793 Score = 348 bits (893), Expect = 5e-94, Method: Composition-based stats. Identities = 190/800 (23%), Positives = 327/800 (40%), Gaps = 67/800 (8%) Query: 87 LVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAGATTA--NITQAIEQMR 144 L + +A D +I++ V A + ++ NI + + Sbjct: 6 LNKHFEQAISVANDGEDEYITTSHVVYAIFKYNKPFHGLIAKEIPDINYLNILDNLGGLL 65 Query: 145 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204 + A Q K++ +L A++ K E+ +++L + + + Sbjct: 66 DMMPKSSGKAPAQTIEFKQFYTELN-NAKEPK--------NELDFMLKILNDKENDCTKI 116 Query: 205 IGEPGVGKTAIVEGLAQRIINGE-------VPEGLKGRRVLALDMGALVAGAKYRGEFEE 257 + G+ AI E + ++ + + ++ + D+ + Y ++ Sbjct: 117 LNHYGINA-AIFELIVRKYKSAFDHRDEVVSRDEAAAIKLNSYDIDDITHAMNYDESRKQ 175 Query: 258 RLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLD 317 + E + I D + ++ N+ K AL +G Sbjct: 176 WQNTEFEPAFEGEKDAINERD------IKKDSPSSLYTANLNKIALEGKIDPLIG--REK 227 Query: 318 EYRQYIEKDAALERRF--QKVFVAEPSVEDT-------IAILRGLKERYELHHHVQITDP 368 E + ++ L RR + V E V T + I+RG + + D Sbjct: 228 EIEKTLQT---LCRRKKNNPILVGEAGVGKTAIIEGIALKIVRGEVPEKLKNKVIYALDA 284 Query: 369 -AIVAAATLSHRY-------IADRQLPDKAIDLIDEAASSIRMQIDSKPEE--LDRLDRR 418 A++A TL + I + AI IDE + + ++ E + L Sbjct: 285 GALIAGTTLRGEFEERLKDLIDEFSANQNAILFIDEIHTIVGAGTGNRNELDMSNILKPS 344 Query: 419 IIQLKLEQQALMKESDEASKKRLDMLNEELSD---KERQYSELEEEWKAEKASLSGTQTI 475 + +L + S + L+ E + E K + Sbjct: 345 LASGELSVIGATTYGEYRSFSQDKALSRRFCKIDVSEPSIDDSVEILKGVAKKYEEFHGV 404 Query: 476 KAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAE 535 K E + ++ A++ + + I E+ +++ + Sbjct: 405 KFSDEILRDSVTLAKKYQSDKFLPDSAIDLIDEVGASFAFKPHEA-------PLEISKDD 457 Query: 536 IAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPN 595 + L+ I ++ L +E + + GQ+EAV ++ A+ RS AGL + Sbjct: 458 LVNTLSISANIANLSSSVDNKQVLKNLEANIKREIFGQDEAVSSLCKALLRSYAGLGGAS 517 Query: 596 RPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVG 655 PIG FLF G +GVGK+EL K LA + R DMSE+ME HSVSRL+GAPPGYVG Sbjct: 518 SPIGVFLFAGSSGVGKSELAKVLAAQL---GVHFERYDMSEYMEAHSVSRLIGAPPGYVG 574 Query: 656 YEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVI 715 +E GG LT +++ PYSVIL DEVEKAHP + NI L + D+ LTD G T DF+NT++I Sbjct: 575 FENGGILTNNIKKHPYSVILFDEVEKAHPSMTNIFLGIFDNASLTDNNGVTTDFKNTIII 634 Query: 716 MTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIA 775 M+SNLG+ + D ++ V + F PEF NRID+++ F+ L + + I Sbjct: 635 MSSNLGTKEAPQVGFTKDESY---KVDSAIKSFFAPEFRNRIDKIINFNRLSGEILEKIV 691 Query: 776 QIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILS 835 + L +L + +I ++ EA L+ GY +GAR LKR I QI + ++ ++L Sbjct: 692 DKTIGELESQL--KNVKISLNKEAKDLIISRGYSDEFGARNLKREISSQISDHISGELLF 749 Query: 836 GELVPGKVIRLEVNEDRIVA 855 G L G ++ + V + + Sbjct: 750 GALQEGGLVSVSVKDGELSF 769 Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 162/552 (29%), Positives = 254/552 (46%), Gaps = 53/552 (9%) Query: 32 LHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVL 91 L M +LN + + +L GINA + + + + Sbjct: 99 LDFMLKILNDKENDCTKILNHYGINAAIFELIVRKYKSAFDHRDEVV------------- 145 Query: 92 NLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAGATTANITQAIEQMRGGESVND 151 A N + A T+ G + + Sbjct: 146 --SRDEAAAIKLNSYDIDDITHAMNYDESRKQW----------QNTEFEPAFEGEKDAIN 193 Query: 152 QGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVG 211 + + YT +L + A +GK+DP+IGR++EI +T+Q L RR KNNP+L+GE GVG Sbjct: 194 ERDIKKDSPSSLYTANLNKIALEGKIDPLIGREKEIEKTLQTLCRRKKNNPILVGEAGVG 253 Query: 212 KTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEG 271 KTAI+EG+A +I+ GEVPE LK + + ALD GAL+AG RGEFEERLK ++++ + + Sbjct: 254 KTAIIEGIALKIVRGEVPEKLKNKVIYALDAGALIAGTTLRGEFEERLKDLIDEFSANQ- 312 Query: 272 NVILFIDELHTMVGAG-KADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALE 330 N ILFIDE+HT+VGAG +D N+LKP+LA GEL +GATT EYR +D AL Sbjct: 313 NAILFIDEIHTIVGAGTGNRNELDMSNILKPSLASGELSVIGATTYGEYRS-FSQDKALS 371 Query: 331 RRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKA 390 RRF K+ V+EPS++D++ IL+G+ ++YE H V+ +D + + TL+ +Y +D+ LPD A Sbjct: 372 RRFCKIDVSEPSIDDSVEILKGVAKKYEEFHGVKFSDEILRDSVTLAKKYQSDKFLPDSA 431 Query: 391 IDLIDEAASSIRMQIDSKPEELDRLD---RRIIQLKLEQQALMKESDEASKKRLDMLNEE 447 IDLIDE +S + P E+ + D I + + ++ + K + E Sbjct: 432 IDLIDEVGASFAFKPHEAPLEISKDDLVNTLSISANIANLSSSVDNKQVLKNLEANIKRE 491 Query: 448 LSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIP 507 + ++ S L + A L G + + + Sbjct: 492 IFGQDEAVSSLCKALLRSYAGLG----------------------GASSPIGVFLFAGSS 529 Query: 508 ELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELH 567 + K A + R +++ A ++R G P + L ++ Sbjct: 530 GVGKSELAKVLAAQLGVHFERYDMSEYMEAHSVSRLIGAPPGYVGFENGGILTNNIKKHP 589 Query: 568 HRVIGQNEAVDA 579 + VI +E A Sbjct: 590 YSVILFDEVEKA 601 >UniRef50_C4YJT6 Heat shock protein 78, mitochondrial n=1 Tax=Candida albicans RepID=C4YJT6_CANAL Length = 700 Score = 346 bits (888), Expect = 2e-93, Method: Composition-based stats. Identities = 192/458 (41%), Positives = 278/458 (60%), Gaps = 7/458 (1%) Query: 114 AALESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAE 173 A ++ + I + + + D R AL+K+ DLT+ A+ Sbjct: 41 ANELAKPNVFTIHNIPSPCFSQVRNFHSSFPRKLQMQQTEQGDNRPALEKFGSDLTQLAK 100 Query: 174 QGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLK 233 +GKLDPVIGRD EIRRTIQ+L RRTKNNPVLIG G GKTA++EGLAQRII GEVP+ +K Sbjct: 101 EGKLDPVIGRDHEIRRTIQILSRRTKNNPVLIGNAGTGKTAVMEGLAQRIIRGEVPDSMK 160 Query: 234 GRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAM 293 ++++ LD+ +++GAKYRG+FE +LK +L ++ ++ GNVILFIDE H ++G GKA+G++ Sbjct: 161 DKQIITLDLAGIISGAKYRGDFESKLKSILKEVEEKNGNVILFIDEFHLLMGLGKAEGSI 220 Query: 294 DAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGL 353 DA N+LKPALARG+L GATT++EYR+Y+EKDAAL RRF V V EP+VEDTI+ILRGL Sbjct: 221 DASNLLKPALARGKLSMCGATTIEEYRKYVEKDAALARRFSPVTVNEPTVEDTISILRGL 280 Query: 354 KERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELD 413 KERYE+HH V+I D A+V AA S+RYI DR LPDKAIDL+DEA+S++R+Q +S+P+ + Sbjct: 281 KERYEVHHGVRIMDSALVTAALYSNRYITDRFLPDKAIDLVDEASSTLRLQHESRPDAIA 340 Query: 414 RLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQ 473 LDR+I+ +++E ++L KE D+ S R L +EL + ++ Sbjct: 341 TLDRQIMTIEIELESLRKEEDQLSIDRKHKLEKEL-----ELDMNILLRQSVVGQDEAID 395 Query: 474 TIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTD 533 + + + + R EL K L L ++R +++ Sbjct: 396 AVSDAVRLQRAGLTSENRPIASFMFLGPTGTGKTELTKSLAQ--FLFNDKNAVVRFDMSE 453 Query: 534 AEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVI 571 + ++R G P + E +L + + V+ Sbjct: 454 FQEKHTISRLIGSPPGYVGYEESGELTEAVRRKPYSVV 491 Score = 342 bits (877), Expect = 4e-92, Method: Composition-based stats. Identities = 162/420 (38%), Positives = 254/420 (60%), Gaps = 16/420 (3%) Query: 453 RQYSELEEEWKAEKASLSGTQTIKAELEQAK------IAIEQARRVGDLARMSELQYGKI 506 R++S + + ++S + +K E A+ A + K Sbjct: 258 RRFSPVTVNEPTVEDTISILRGLKERYEVHHGVRIMDSALVTAALYSNRYITDRFLPDKA 317 Query: 507 PELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWT------GIPVSRMMESEREKLL 560 +L + + +L+ ++ + + + + + + R + E+E L Sbjct: 318 IDLVDEASSTLRLQHESRPDAIATLDRQIMTIEIELESLRKEEDQLSIDRKHKLEKELEL 377 Query: 561 RMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALAN 620 M L V+GQ+EA+DAVS+A+R RAGL NRPI SF+FLGPTG GKTEL K+LA Sbjct: 378 DMNILLRQSVVGQDEAIDAVSDAVRLQRAGLTSENRPIASFMFLGPTGTGKTELTKSLAQ 437 Query: 621 FMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVE 680 F+F+ A+VR DMSEF EKH++SRL+G+PPGYVGYEE G LTEAVRR+PYSV+L DE E Sbjct: 438 FLFNDKNAVVRFDMSEFQEKHTISRLIGSPPGYVGYEESGELTEAVRRKPYSVVLFDEFE 497 Query: 681 KAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD----YAH 736 KAHPD+ +LLQVLD+G LTD G+ +DF+NT+++MTSN+G +++ + + Sbjct: 498 KAHPDLSKLLLQVLDEGSLTDSHGKKIDFKNTIIVMTSNIGQEILLADKNTYEDGHINSE 557 Query: 737 MKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHIS 796 +K VL + H++ PEF+NRID++VVF+ L + + I I+L+ + RL ++ + ++ Sbjct: 558 VKSQVLENLRHHYAPEFLNRIDDIVVFNRLSKTALKEILDIRLREIGDRLVDKRIILQLT 617 Query: 797 DEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAV 856 DEA LL + GYDP YGARPL R +++++ +PLA +++ G++ + +++EV + +I V Sbjct: 618 DEAKTLLCDMGYDPTYGARPLNRVLRKKLLDPLAMRLIKGQVQENETVKVEVKDHKIYVV 677 >UniRef50_C3XML9 Endopeptidase subunit Clp ATP-binding A n=1 Tax=Helicobacter winghamensis ATCC BAA-430 RepID=C3XML9_9HELI Length = 756 Score = 342 bits (878), Expect = 3e-92, Method: Composition-based stats. Identities = 178/591 (30%), Positives = 290/591 (49%), Gaps = 40/591 (6%) Query: 2 RLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLR 61 + ++ + + L +AQ A ++++ H+ ALL E ++ L G N ++ Sbjct: 1 MFE-ISKELNVVLQNAQKEAKDKGHEYLTLEHIFYALLENEK--ITKTLQDCGGNVEIMK 57 Query: 62 TDINQALNRL----PQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALE 117 I + L + P+ + G Q + + RV+ + + + A LE Sbjct: 58 KQIQRYLKQFLQSYPERQEQGAMPQETLAVTRVIEIMIGHVKGSQRQQAQVSDLLAAILE 117 Query: 118 SRG-TLADILKAAGATTANITQAIEQMRGGESVND-------QGAEDQRQALKKYTIDLT 169 A IL A G T N+ + I + + S N E + AL+ Y +LT Sbjct: 118 EEKAFCAQILNAQGITRLNVLEYITENQENFSFNKSIKEEVKDEGEKRESALEAYCTNLT 177 Query: 170 ERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVP 229 + A +GK++P+IGR+ EIRR +VL R+ KNNP+L+GEPGVGKTA+ EGLA ++I + P Sbjct: 178 QMAREGKIEPLIGREVEIRRCFEVLLRKKKNNPLLVGEPGVGKTAVAEGLALQMIATQSP 237 Query: 230 EGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKA 289 L+ + L+MGALVAG KYRG+FE+R+K + +++ + GNVILFIDE+H ++GAG Sbjct: 238 --LENTEMYMLNMGALVAGTKYRGDFEKRIKTLTDEVLE-LGNVILFIDEIHMLIGAGAT 294 Query: 290 D-GAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIA 348 + G+MDA N+LKP L G+L C+GA+T EYR +++KD AL RRF K+ V EPS E++I Sbjct: 295 NSGSMDASNLLKPMLGNGKLRCIGASTYAEYRSFLDKDKALSRRFAKIEVKEPSREESIL 354 Query: 349 ILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSK 408 IL G+K+ YE +H+V AI LS R++ DR LPDKAID++DE +S ++ S Sbjct: 355 ILEGVKKHYEKYHNVSFNSEAIELIVDLSIRHLHDRFLPDKAIDIMDEVGASYKLDGKSG 414 Query: 409 PEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKAS 468 L + + + + ++ + DK + Sbjct: 415 KVSLQSIKKMVATM----------------AKIPEIEATKDDKAVLKGLEKHLKSRIFGQ 458 Query: 469 LSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLR 528 + + + L++ K + + S EL K+L A + R Sbjct: 459 DNAIVEVVSALKRNKAGLGAPNKPIGSFLFSGPSGVGKTELAKELAKAL-----NINFER 513 Query: 529 NKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDA 579 +++ ++ G + + L M ++ H ++ +E A Sbjct: 514 LDMSEYMERISSSQLIGAAAGYVGYEKGGILTEMIKKNPHTLLLLDEVEKA 564 Score = 328 bits (841), Expect = 5e-88, Method: Composition-based stats. Identities = 197/790 (24%), Positives = 345/790 (43%), Gaps = 76/790 (9%) Query: 82 QPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAGATTANITQAIE 141 + S++L VL K A+ +G +++ E A LE+ L+ G + + I+ Sbjct: 3 EISKELNVVLQNAQKEAKDKGHEYLTLEHIFYALLENEKIT-KTLQDCGGNVEIMKKQIQ 61 Query: 142 QMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNN 201 + + ++Q ++ + R I+++ K + Sbjct: 62 RYLKQFLQSYPERQEQGAMPQETLA--------------------VTRVIEIMIGHVKGS 101 Query: 202 PVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKG 261 + AI+E + L + + L++ + + F + +K Sbjct: 102 QRQQAQVSDLLAAILEE-----EKAFCAQILNAQGITRLNVLEYITENQENFSFNKSIKE 156 Query: 262 -VLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYR 320 V ++ K+E + + L M GK ++P + R E R Sbjct: 157 EVKDEGEKRESALEAYCTNLTQMAREGK----------IEPLIGR----------EVEIR 196 Query: 321 QYIEKDAALERRFQKVFVAEPSVEDTI----AILRGLKER--YELHHHVQITDPAIVAAA 374 + E ++ + V EP V T L+ + + E + A+VA Sbjct: 197 RCFEVLLRKKKN-NPLLVGEPGVGKTAVAEGLALQMIATQSPLENTEMYMLNMGALVAGT 255 Query: 375 TLSHRYIA-------DRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQ 427 + + I IDE I + + + + + Sbjct: 256 KYRGDFEKRIKTLTDEVLELGNVILFIDEIHMLIGAGATNSGSMDASNLLKPMLGNGKLR 315 Query: 428 ALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIE 487 + S A + ++ LS + + E + L G + + E Sbjct: 316 CI-GASTYAEYRSFLDKDKALSRRFAKIEVKEPSREESILILEGVKKHYEKYHNVSFNSE 374 Query: 488 QARRVGDLAR---MSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWT 544 + DL+ K ++ ++ A+ +L+GK+ + V+ I +++A Sbjct: 375 AIELIVDLSIRHLHDRFLPDKAIDIMDEVGASYKLDGKSGK-----VSLQSIKKMVATMA 429 Query: 545 GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFL 604 IP + ++ L +E+ L R+ GQ+ A+ V +A++R++AGL PN+PIGSFLF Sbjct: 430 KIPEIEATKDDKAVLKGLEKHLKSRIFGQDNAIVEVVSALKRNKAGLGAPNKPIGSFLFS 489 Query: 605 GPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTE 664 GP+GVGKTEL K LA + + R+DMSE+ME+ S S+L+GA GYVGYE+GG LTE Sbjct: 490 GPSGVGKTELAKELAKAL---NINFERLDMSEYMERISSSQLIGAAAGYVGYEKGGILTE 546 Query: 665 AVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDL 724 +++ P++++LLDEVEKAHPDV N+ LQV+D GRLTD G ++DF + ++I+TSN+GS Sbjct: 547 MIKKNPHTLLLLDEVEKAHPDVLNVFLQVMDYGRLTDNNGESIDFSSVILILTSNVGSKE 606 Query: 725 IQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYK 784 + D + +F PEF NR+D ++ F+PL + I I + L Sbjct: 607 APVLGFKQDTNLRFS---SAIKDHFSPEFRNRLDAIIAFNPLSHKEILKIVDKNIVDLNN 663 Query: 785 RLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVI 844 ++ E+ EI + + + L++ G+D GARPL IQ++I+N L+ +L GEL G V Sbjct: 664 QILEKKVEIILDKSSKEYLAKIGFDVELGARPLGLVIQKEIKNILSDAMLFGELSKGGVA 723 Query: 845 RLEVNEDRIV 854 + ++ Sbjct: 724 HFTCVKGKLT 733 >UniRef50_D1AUG7 ATP-dependent clp protease ATP-binding subunit n=14 Tax=Rickettsiales RepID=D1AUG7_ANACI Length = 781 Score = 339 bits (868), Expect = 4e-91, Method: Composition-based stats. Identities = 179/618 (28%), Positives = 291/618 (47%), Gaps = 56/618 (9%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 L+ + +L A S+A ++ H L + V +L ++ +LR + Sbjct: 15 LSKNLEASLHRALSIAFDFRHECATLEH--LLLALTDDLDVRRVLYVCRVSIDRLRATLI 72 Query: 66 QAL--NRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLA 123 L + + +V+PS +V++ A G + I+ + + + + Sbjct: 73 NFLRYEMSIAMNQSVTEVRPSMAFEKVVHRAIVHAHASGKDEINGVNVLAEIFLEKDSCS 132 Query: 124 ------------------------DILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQ 159 + L ++ G ++ + Sbjct: 133 VSFLNEHNVKYIDVVSCISSNEHPEELYDQHDLGKDVDFVKRGAVGFPHISKDVVSKDGE 192 Query: 160 ALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGL 219 +L+ Y ++L A+ GK+D VIGR E RTI+VL RR KNNP+ +G+ GVGKTAIVEGL Sbjct: 193 SLEAYCVNLNVLAKNGKIDYVIGRQYEQERTIEVLLRRRKNNPLYVGDSGVGKTAIVEGL 252 Query: 220 AQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDE 279 A RI+ G + LK + +LDMG+L+AG +YRG+FEER+K V+ + + + N +LFIDE Sbjct: 253 ALRIVEGNIVPQLKCVEIYSLDMGSLLAGTRYRGDFEERIKAVIRAI-ENKKNAVLFIDE 311 Query: 280 LHTMVGAGKADGA-MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFV 338 +HT++GAG G+ +DA N+LKPALARG + C+GATT EY EKD AL RR+QK+ V Sbjct: 312 IHTIIGAGSTSGSPLDASNLLKPALARGSIRCIGATTYKEYNSNFEKDRALARRYQKINV 371 Query: 339 AEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAA 398 E +VE+TI IL G+K YE++H V T A+ AA LS RYIA+R LPDKA+D++DEA Sbjct: 372 EESTVEETIQILSGIKSYYEIYHDVHYTSQAVKYAAELSDRYIAERMLPDKAVDVLDEAG 431 Query: 399 SSIRMQIDSKPEELDRLDRRIIQLKLEQ---QALMKESDEASKKRLDMLNEELSDKERQY 455 +++ + + D I ++ + L K + L + + ++ Sbjct: 432 VYAKLRSGENGKVVTGRDIESIISRITEIPCDNLFASDTHKVKNLEENLKQVIFGQDAAI 491 Query: 456 SELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEA 515 S++ + + KA L Q + GK EL KQL Sbjct: 492 SQIVDAIRIAKAGLRSHQK----------------PLASYLLAGPTGVGK-TELVKQL-- 532 Query: 516 ATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNE 575 + M+L+R +++ + +AR G P + + L + V+ +E Sbjct: 533 ---AKNMGMKLVRFDMSEYMESHTVARMIGSPPGYVGYEQGGLLTDTIARNQYSVLLLDE 589 Query: 576 AVDAVSNAIRRSRAGLAD 593 ++ +++ + D Sbjct: 590 -IEKAHSSVYNILLQIMD 606 Score = 305 bits (781), Expect = 5e-81, Method: Composition-based stats. Identities = 145/464 (31%), Positives = 231/464 (49%), Gaps = 12/464 (2%) Query: 391 IDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSD 450 I I A S+ +D+ L R I+ S+ + L ++++ Sbjct: 312 IHTIIGAGSTSGSPLDASNLLKPALARGSIRCIGATTYKEYNSNFEKDRALARRYQKINV 371 Query: 451 KERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELE 510 +E E + K+ + + K A E + R + + + E Sbjct: 372 EESTVEETIQILSGIKSYYEIYHDVHYTSQAVKYAAELSDRYIAERMLPDKAVDVLDEAG 431 Query: 511 KQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRV 570 + + GK VT +I +++R T IP + S+ K+ +E+ L + Sbjct: 432 VYAKLRSGENGK-------VVTGRDIESIISRITEIPCDNLFASDTHKVKNLEENLKQVI 484 Query: 571 IGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMV 630 GQ+ A+ + +AIR ++AGL +P+ S+L GPTGVGKTEL K LA M +V Sbjct: 485 FGQDAAISQIVDAIRIAKAGLRSHQKPLASYLLAGPTGVGKTELVKQLAKNM---GMKLV 541 Query: 631 RIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNIL 690 R DMSE+ME H+V+R++G+PPGYVGYE+GG LT+ + R YSV+LLDE+EKAH V+NIL Sbjct: 542 RFDMSEYMESHTVARMIGSPPGYVGYEQGGLLTDTIARNQYSVLLLDEIEKAHSSVYNIL 601 Query: 691 LQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKEL--VLGVVSHN 748 LQ++D G +TD GR V FRN V+++T+N G+ + D + + Sbjct: 602 LQIMDYGCITDTYGRKVSFRNVVIVLTTNAGAVEFSQNAVGFDRDRTFHIGSERKAIEKI 661 Query: 749 FRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGY 808 F PEF NR+D VV F L + + + L +L +G +I I +++ L++ G Sbjct: 662 FGPEFCNRLDAVVSFSYLSADVMEKVVGKFIAELRDQLSRKGVDISIDKASVEFLTKMGQ 721 Query: 809 DPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDR 852 YGAR + I Q+I+ LA ++L G+L G + + + + Sbjct: 722 QDGYGARKAQSVIAQKIKKHLALEMLFGKLAYGGRVEVRFDPQK 765 >UniRef50_C3XFH5 ATP-dependent Clp protease ClpB n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XFH5_9HELI Length = 763 Score = 336 bits (860), Expect = 3e-90, Method: Composition-based stats. Identities = 169/593 (28%), Positives = 280/593 (47%), Gaps = 26/593 (4%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRT 62 + L + + + H +L G L+ + G N L Sbjct: 1 MGELNSTLSNIFQKTLHFVEDMRHDVLTIEHAFYVMLENPLG--RELVEATGANTKILMD 58 Query: 63 DINQALNRLPQVEGTGGD---VQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESR 119 + L + + + +RV + A+ + F +A ++ Sbjct: 59 SLGAYLEKHIPKGRALKELEAPHQTPAFMRVFDHMISHAKNAQKASVGIGDFFVALMQEE 118 Query: 120 GTL-ADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLD 178 A +LKA G ++ + + E V+ + +D + L+KY +L + A +GK+D Sbjct: 119 DCYCARLLKAQGIQIEDVMR--IVVDFDEHVSREKTKDSQSQLEKYAKNLNQLAIEGKID 176 Query: 179 PVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVL 238 P+IGRD EI + QVL RR KNNP+LIGE GVGK+AIVEGLA RI+ VP L + Sbjct: 177 PLIGRDLEINQIAQVLCRRKKNNPMLIGEAGVGKSAIVEGLALRIVERSVPAKLLNNVIY 236 Query: 239 ALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKAD-GAMDAGN 297 A+D+ ++VAG KYRGEFE R+K +L ++ K + N+I+F DE+H +VGAG+++ G MD N Sbjct: 237 AVDVSSVVAGTKYRGEFETRIKKILAEVEK-DKNIIIFFDEIHMIVGAGQSNSGGMDFSN 295 Query: 298 MLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERY 357 +LKP LA G L C+GATT +Y+ +KD AL RRF ++ V EPS E+ + IL + Y Sbjct: 296 LLKPMLASGRLRCIGATTSHDYKNSFDKDKALARRFTQIKVEEPSEEECLLILEKIAPLY 355 Query: 358 ELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRM--------QIDSKP 409 E H+V + AI A +LS +YI +R LPDKAIDL+DEA + ++ + Sbjct: 356 EKFHNVTYENEAIKACVSLSSKYITERHLPDKAIDLMDEAGAKAQLNEFLCNDERKSETL 415 Query: 410 EELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQ---YSELEEEWKAEK 466 E+L + + K + + + KE E+ + + + + + + + K Sbjct: 416 EKLTKTKKTKKDSKTQHKIITKEHIESLMASITNIPKSTINADESMLLKNLESKLKKRIF 475 Query: 467 ASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRL 526 + + I +++ K + + R + EL K+L ++ Sbjct: 476 SQDKAIEKIVEKIKINKAGLGELHRPIASFLFTGPSGVGKTELSKELAKIL-----GIKF 530 Query: 527 LRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDA 579 R +++ + +++ G P + E L+ + H V+ +E A Sbjct: 531 ERIDMSEYAESHSISKLIGSPAGYVGYEEGGLLINKIRINPHCVLLLDEIEKA 583 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 154/507 (30%), Positives = 251/507 (49%), Gaps = 11/507 (2%) Query: 350 LRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKP 409 ++ + E ++ I I +L+ +S R++ Sbjct: 257 IKKILAEVEKDKNIIIFFDEIHMIVGAGQSNSGGMDF----SNLLKPMLASGRLRCIGAT 312 Query: 410 EELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASL 469 D + L ++ + +E S++ ++ E+++ ++ + E +A KA + Sbjct: 313 TSHDYKNSFDKDKALARRFTQIKVEEPSEEECLLILEKIAPLYEKFHNVTYENEAIKACV 372 Query: 470 SGTQTIKAELEQAKIAIEQARRVGDLARMSELQY-GKIPELEKQLEAATQLEGKTMRLLR 528 S + E AI+ G A+++E + + T+ K + Sbjct: 373 SLSSKYITERHLPDKAIDLMDEAGAKAQLNEFLCNDERKSETLEKLTKTKKTKKDSKTQH 432 Query: 529 NKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSR 588 +T I ++A T IP S + E L +E +L R+ Q++A++ + I+ ++ Sbjct: 433 KIITKEHIESLMASITNIPKSTINADESMLLKNLESKLKKRIFSQDKAIEKIVEKIKINK 492 Query: 589 AGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVG 648 AGL + +RPI SFLF GP+GVGKTEL K LA + RIDMSE+ E HS+S+L+G Sbjct: 493 AGLGELHRPIASFLFTGPSGVGKTELSKELAKIL---GIKFERIDMSEYAESHSISKLIG 549 Query: 649 APPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVD 708 +P GYVGYEEGG L +R P+ V+LLDE+EKAH DV+NILLQ++D LTD Q D Sbjct: 550 SPAGYVGYEEGGLLINKIRINPHCVLLLDEIEKAHSDVYNILLQIMDSATLTDNQNNKAD 609 Query: 709 FRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGE 768 F+N ++IMTSN GS E + V + F PEF +R+D ++ F PLG Sbjct: 610 FKNVILIMTSNAGSK---EGNSVGFLDTSEHRVGMAIKDTFSPEFRSRLDAIIPFMPLGV 666 Query: 769 QHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENP 828 + IAQ + L + L+E+ +++S +A + +++ D GAR +K+ I I+ P Sbjct: 667 NELQKIAQKYITDLNETLKEKHITLNLSTKAAQFIAQQSIDKALGAREIKKTIDSAIKLP 726 Query: 829 LAQQILSGELVPGKVIRLEVNEDRIVA 855 L+ +L GEL G V + V + +V Sbjct: 727 LSNAMLFGELRKGGVAHINVKNNTLVF 753 >UniRef50_B1GUR2 ATP-dependent Clp protease-like protein n=1 Tax=Geobacillus stearothermophilus RepID=B1GUR2_BACST Length = 424 Score = 333 bits (853), Expect = 2e-89, Method: Composition-based stats. Identities = 139/400 (34%), Positives = 221/400 (55%), Gaps = 12/400 (3%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M++ ++ Q +L+ A+ A I+ HL+ L+ + + +L +AGI+ + Sbjct: 1 MKM--FSSDLQNSLSLAKQQAWKFGVSEIKSEHLLWGLIADTKFNSAQILINAGIDLDVV 58 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG 120 + +I L + S++ ++ LA+ N I ++ + + + + Sbjct: 59 KKEIESKLTSIKPGR------MYSENGEKIYKSMLSLAEHHQ-NIIDTQHLLYSLISTDC 111 Query: 121 TLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPV 180 T +I+K G I + GE + L KY IDLT+ + +GKL Sbjct: 112 TGTNIIKKIGGDPLRIKSLCLEYINGE--SLTSTYYNTPNLDKYCIDLTDLSTKGKLSFP 169 Query: 181 IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL 240 +GR++EI VL ++ K N V+ G PGVGKT++VEGLA RI + EV + L ++ +L Sbjct: 170 VGREKEIDILQTVLLKKKKRNIVITGLPGVGKTSLVEGLAIRITSKEVSKKLYNLKIKSL 229 Query: 241 DMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLK 300 + +LVAG K+RGEFEERL G++ +L+ N++LFIDE+HT++GAG G +DA N+LK Sbjct: 230 SLASLVAGTKFRGEFEERLVGIVEELSMYP-NIVLFIDEIHTLIGAGAVPGGLDASNILK 288 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELH 360 P LA G C+GATT +EY +Y +KDAAL+RRFQ++ + EPS +T+ IL L Y + Sbjct: 289 PVLATGNFICIGATTEEEYEKYFKKDAALDRRFQRIPLQEPSKTETLKILSVLSHEYGKY 348 Query: 361 HHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400 H+V + + L+ +Y DR PDKAIDL+D + Sbjct: 349 HNVFYSQEVLEEIVELADKYFPDRYFPDKAIDLLDYVGAK 388 >UniRef50_Q9ZN31 ATP-DEPENDENT PROTEASE,ATP-BINDING SUBUNIT n=17 Tax=Helicobacter RepID=Q9ZN31_HELPJ Length = 742 Score = 331 bits (847), Expect = 1e-88, Method: Composition-based stats. Identities = 177/585 (30%), Positives = 277/585 (47%), Gaps = 35/585 (5%) Query: 3 LDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGS-VSPLLTSAGINAGQLR 61 +D+ L+ A LAL ++ H++ A+L G + L G ++ Sbjct: 1 MDKFNKDLNEVLSHALDLALDFNHVLCTTEHVLLAILEHGIGIRIFNTLEEDG--YHKME 58 Query: 62 TDINQALNRLPQVEGTGGDVQP-SQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG 120 + L + ++ + S L RV + + E ++ LE Sbjct: 59 QILKDYLQQYIPLKNDPTKIPDRSPVLARVFKKMYA----SYLDSVGVEELLIFILEYDD 114 Query: 121 TLA-DILKAAGATTANITQA----IEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQG 175 A +L + G T + A ++ + + LKKYT +L+ A+ Sbjct: 115 CYASKLLDSFGITRSYFKSALLDFDNPNDINDNDINNEEAPKSTPLKKYTKNLSALAQNN 174 Query: 176 KLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGR 235 LDPVIGR+EEI R I++L RR KNNP+LIGE GVGKT+I E LA +I EVPE L+ Sbjct: 175 ALDPVIGREEEILRVIEILGRRKKNNPLLIGEAGVGKTSIAEALALKIAQKEVPEFLQEY 234 Query: 236 RVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKAD-GAMD 294 V +LD+ +VAGAKYRG+FE+RLK L ++ + G +ILFIDE+HT++GAG ++ G++D Sbjct: 235 EVYSLDLALMVAGAKYRGDFEKRLKKTLKEIQQ-NGRIILFIDEIHTLLGAGSSNAGSLD 293 Query: 295 AGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLK 354 A N+LKP L G L C+GATT +EYR EKD A RRF V V EPS E IL+ + Sbjct: 294 AANILKPVLTDGSLKCLGATTFEEYRSVFEKDKAFNRRFSIVNVEEPSKEACYLILKNIA 353 Query: 355 ERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDR 414 YE HH V+ + A L+ Y+ D+ LPDKAI+L+DE S ++ + Sbjct: 354 PLYEEHHQVRYNESVFKACVDLTSYYMHDKFLPDKAIELLDEVGSRKKINPKKGKKISVD 413 Query: 415 LDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQT 474 + + LKL+ + SD+ + R + +++ + +A + + Sbjct: 414 DVQETLALKLKIPKMRLNSDKKALLRNLE--------KSLKNKIFAQTEAINLVSNAIK- 464 Query: 475 IKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDA 534 Q + + VG + GK EL K+L L R +++ Sbjct: 465 -----IQHCGLSAKNKPVGSFLFVGPSGVGK-TELAKELALNLNLH-----FERFDMSEY 513 Query: 535 EIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDA 579 + A +A+ G P + + L+ ++ H ++ +E A Sbjct: 514 KEAHSVAKLIGSPSGYVGFEQGGLLVNAIKKHPHCLLLLDEIEKA 558 Score = 285 bits (728), Expect = 6e-75, Method: Composition-based stats. Identities = 149/578 (25%), Positives = 261/578 (45%), Gaps = 44/578 (7%) Query: 297 NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRF--QKVFVAEPSVEDT-------I 347 N L P + R +E + IE L RR + + E V T + Sbjct: 174 NALDPVIGR----------EEEILRVIE---ILGRRKKNNPLLIGEAGVGKTSIAEALAL 220 Query: 348 AILRGLKERYELHHHVQITDPAIVAAATLS--------HRYIADRQLPDKAIDLIDEAAS 399 I + + + V D A++ A + + + Q + I IDE + Sbjct: 221 KIAQKEVPEFLQEYEVYSLDLALMVAGAKYRGDFEKRLKKTLKEIQQNGRIILFIDEIHT 280 Query: 400 SIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELE 459 + + + + + L + E + + ++ + + + E Sbjct: 281 LLGAGSSNAGSLDAANILKPVLTDGSLKCLGATTFEEYRSVFEK-DKAFNRRFSIVNVEE 339 Query: 460 EEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGD---LARMSELQYGKIPELEKQLEAA 516 +A L + E Q + + D + K EL ++ + Sbjct: 340 PSKEACYLILKNIAPLYEEHHQVRYNESVFKACVDLTSYYMHDKFLPDKAIELLDEVGSR 399 Query: 517 TQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEA 576 ++ K K++ ++ E LA IP R+ ++ L +E+ L +++ Q EA Sbjct: 400 KKINPKKG----KKISVDDVQETLALKLKIPKMRLNSDKKALLRNLEKSLKNKIFAQTEA 455 Query: 577 VDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSE 636 ++ VSNAI+ GL+ N+P+GSFLF+GP+GVGKTEL K LA + + R DMSE Sbjct: 456 INLVSNAIKIQHCGLSAKNKPVGSFLFVGPSGVGKTELAKELALNL---NLHFERFDMSE 512 Query: 637 FMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDD 696 + E HSV++L+G+P GYVG+E+GG L A+++ P+ ++LLDE+EKAHP+V+++LLQV+D+ Sbjct: 513 YKEAHSVAKLIGSPSGYVGFEQGGLLVNAIKKHPHCLLLLDEIEKAHPNVYDLLLQVMDN 572 Query: 697 GRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINR 756 L+D G F++ ++IMTSN+GS + V PE +R Sbjct: 573 ATLSDNLGNKASFKHVILIMTSNVGSKDKDTLGFFSTKNAKYDR---AVKELLTPELRSR 629 Query: 757 IDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARP 816 ID +V F+ L + I ++L +L E+G + E +K +++ Y GAR Sbjct: 630 IDAIVPFNALSLEDFERIVSVELDKLKALALEQGVILKFHKEVVKCIAQKSYQTTLGARE 689 Query: 817 LKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIV 854 +K+ I +I+ L+ +L I + ++++V Sbjct: 690 IKKIIHNEIKTQLSDILLLQSFKKPCKIACLLEKNQLV 727 >UniRef50_B2S440 ATP-dependent Clp protease, subunit A n=2 Tax=Treponema pallidum RepID=B2S440_TREPS Length = 809 Score = 329 bits (843), Expect = 3e-88, Method: Composition-based stats. Identities = 168/629 (26%), Positives = 280/629 (44%), Gaps = 74/629 (11%) Query: 6 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 65 ++ Q+ L A LA +++I H++ + L ++ + + ++++ Sbjct: 5 ISASVQIILDQAFDLARKRRHEYITAEHVLFSALAHPA--ALEIINLCSADIALIHSNLS 62 Query: 66 QALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADI 125 + L V+ S +L + + + +++ L++ A Sbjct: 63 EFLKTQVPVD-LSHTPSQSLGFQHLLKRAVLYCEANKKSALEVGDLLVSLLQAETNYASY 121 Query: 126 -LKAAGATTANITQAI-------------------------------------------- 140 ++ +G +TA + + I Sbjct: 122 YMRMSGMSTARLIEVIARVNGIRHGDKNVSMGSNAQERYSESDDVGESAGHGPPLDGTEG 181 Query: 141 --------EQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQ 192 + L+KYT++LTERA +G+L P+IGR +EI RTIQ Sbjct: 182 DGNTADVHVHYEHCAHKRTDADTHRYTVLEKYTVNLTERARRGELAPLIGRTQEIERTIQ 241 Query: 193 VLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYR 252 +L RR KNNPV +GE GVGKTAI EGLAQRI+ +VPE L+G + +LDM +L+AG K+R Sbjct: 242 ILCRRQKNNPVHVGEAGVGKTAITEGLAQRIVRCDVPEALEGVEIFSLDMTSLLAGTKFR 301 Query: 253 GEFEERLKGVLNDLAKQEGNVILFIDELH-TMVGAGKADGAMDAGNMLKPALARGELHCV 311 G+FEERLK + +L K + ILFIDE+H + G +DA N+LKP L+ G++ C+ Sbjct: 302 GDFEERLKRLAEELEK-KTQAILFIDEIHTVVGTGSGGSGGLDASNLLKPLLSSGKIRCI 360 Query: 312 GATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIV 371 G+TT +EY ++ KD AL RRFQK+ + EPS E+T+ IL G++ YE H V +D A+ Sbjct: 361 GSTTYEEYTKHFRKDQALARRFQKIDIEEPSEEETLRILEGIRTLYEDFHAVHYSDEALA 420 Query: 372 AAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEE-LDRLDRRIIQLKLEQQALM 430 AA LS +YI R LPDKAID+IDEA + ++ E + + ++ + Sbjct: 421 AAVRLSVQYIQGRHLPDKAIDIIDEAGACAKLSRGKHGTEGVCSVIGESDIDEIVAKIAK 480 Query: 431 KESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQAR 490 S ++ L + + L++A++ + Sbjct: 481 IPKQRVSASEIEKLRNFERSISEKI----------FGQGEAIDLVTRTLKRARVGL---- 526 Query: 491 RVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSR 550 ++ L + + K A T + + L R +++ + ++R G P Sbjct: 527 -RVKHKPIANLLFVGATGVGKTELARTLAQELGIVLHRFDMSEYQEKHTVSRLIGSPPGY 585 Query: 551 MMESEREKLLRMEQELHHRVIGQNEAVDA 579 + E L ++ H V+ +E A Sbjct: 586 VGFEEGGLLTDAVRKQPHAVLLLDEIEKA 614 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 178/576 (30%), Positives = 281/576 (48%), Gaps = 45/576 (7%) Query: 305 RGEL-HCVGATTLDEYRQYIEKDAALERRF--QKVFVAEPSVEDTIAILRGLKERY---- 357 RGEL +G T E + I+ L RR V V E V T AI GL +R Sbjct: 223 RGELAPLIGRT--QEIERTIQ---ILCRRQKNNPVHVGEAGVGKT-AITEGLAQRIVRCD 276 Query: 358 --ELHHHVQI---TDPAIVAAATLS-------HRYIADRQLPDKAIDLIDEAASSIRMQI 405 E V+I +++A R + + +AI IDE + + Sbjct: 277 VPEALEGVEIFSLDMTSLLAGTKFRGDFEERLKRLAEELEKKTQAILFIDEIHTVVGTGS 336 Query: 406 DSKPEELDRLDRRII----------QLKLEQQALMKESDEASKKRLDMLNEELSDKERQY 455 + + E+ D+A +R ++ E +E Sbjct: 337 GGSGGLDASNLLKPLLSSGKIRCIGSTTYEEYTKHFRKDQALARRFQKIDIEEPSEEETL 396 Query: 456 SELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEA 515 + + + E A+ + + + + I E + Sbjct: 397 R----ILEGIRTLYEDFHAVHYSDEALAAAVRLSVQYIQGRHLPDKAIDIIDEAGACAKL 452 Query: 516 ATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNE 575 + G + + + +++I E++A+ IP R+ SE EKL E+ + ++ GQ E Sbjct: 453 SRGKHG--TEGVCSVIGESDIDEIVAKIAKIPKQRVSASEIEKLRNFERSISEKIFGQGE 510 Query: 576 AVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMS 635 A+D V+ ++R+R GL ++PI + LF+G TGVGKTEL + LA + + R DMS Sbjct: 511 AIDLVTRTLKRARVGLRVKHKPIANLLFVGATGVGKTELARTLAQEL---GIVLHRFDMS 567 Query: 636 EFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLD 695 E+ EKH+VSRL+G+PPGYVG+EEGG LT+AVR++P++V+LLDE+EKAHPD+FN+LLQV+D Sbjct: 568 EYQEKHTVSRLIGSPPGYVGFEEGGLLTDAVRKQPHAVLLLDEIEKAHPDIFNVLLQVMD 627 Query: 696 DGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGV-VSHNFRPEFI 754 LTD QGR DFRN ++IMTSN G+ + + V+ V F PEF Sbjct: 628 YATLTDNQGRKADFRNVILIMTSNAGARNMGVSLIGFHKGQVGTAVIDEAVERIFSPEFR 687 Query: 755 NRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGA 814 NR+D V+ F L + + IA+ +L + ++L+++ I+D+AL LL+E + GA Sbjct: 688 NRLDAVIRFDALSLETMERIARKELALVCEQLQKKHIRFDITDDALALLAERSHSGGSGA 747 Query: 815 RPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNE 850 R + R ++Q++ N LA +L G + G +R V + Sbjct: 748 RNVARLVEQEVANVLADLMLFGGVAEGDALRCTVKD 783 >UniRef50_A5UYN2 ATPase AAA-2 domain protein n=1 Tax=Roseiflexus sp. RS-1 RepID=A5UYN2_ROSS1 Length = 786 Score = 326 bits (835), Expect = 3e-87, Method: Composition-based stats. Identities = 177/613 (28%), Positives = 296/613 (48%), Gaps = 37/613 (6%) Query: 7 TNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEG------------------GSVSP 48 + L L A + A ++ +EP H+ ALL E G + Sbjct: 4 SPGVSLILVLAVAEAQLTESSHLEPEHIFLALLKSEDISTETVPGMPQVSLAAATGEIQR 63 Query: 49 LL---TSAGINAGQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNF 105 + GI+A +LR + + + + G + SQ + N + LA + + Sbjct: 64 IAAFWQQEGISAKRLRRRLRAIVREMSKSRGEFSGHR-SQRGRELFNKAETLAWQNQRDN 122 Query: 106 ISSELFVLAALESRGTLADIL-KAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKY 164 ++ ++ +LE D+L + + + ++ + Q L KY Sbjct: 123 VTPFDLLVCSLEIESKAIDMLFQEMNLERQKLLERARELLAWTPETQRKEISQEHRLAKY 182 Query: 165 TIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRII 224 DLT A G+L PVIGR EEI++ ++L +R+KNNP+L+G+PGVGKTAI EGLA Sbjct: 183 GRDLTALARAGRLGPVIGRAEEIKQIARILVQRSKNNPLLLGDPGVGKTAIAEGLASYAA 242 Query: 225 NGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMV 284 + L+ + + + AL++GA YRG+FEER++ V+ + A+Q+ N++LF+DE+HT++ Sbjct: 243 SENAVTPLRDFYFVEISVAALLSGAMYRGQFEERVQEVI-ETARQDKNLVLFLDEIHTLM 301 Query: 285 GAGKADGA-MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSV 343 G+G + +DA NMLKPALARG++ C+GATT+DEYR++IE D AL RRFQ V++ EPS Sbjct: 302 GSGAGGSSTLDAANMLKPALARGDIRCIGATTIDEYRKHIEPDGALARRFQIVWIDEPSP 361 Query: 344 EDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRM 403 +T+ ILRGL+ + + HH ++I D A+ A +LS RYI D PDKAI ++DEA + R+ Sbjct: 362 TETLHILRGLRSKMQEHHQIEIPDEALQKAVSLSGRYITDGYQPDKAITVLDEACARRRL 421 Query: 404 QIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWK 463 L + + L E R + E+ + + L E + Sbjct: 422 -----------LTIHVQSSPTQTSHLEVEDIGQVVARRTQIPLEVILQSDEERLLHLEEE 470 Query: 464 AEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKT 523 K L + ++ E +I+ R G + + E + L Sbjct: 471 LGKRVLGQDEAVRTVAEAVRISRVGLRAPGKPIVLMFAGPTGTGKTELAKALSETLFFDP 530 Query: 524 MRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNA 583 RL+ +++ + + +A+ G P + E L+R + + V+ +E ++ + Sbjct: 531 NRLITLDMSEYQESHSVAKLIGSPPGYIGFGEEPYLVRELRLHPYSVVLLDE-IEKAHPS 589 Query: 584 IRRSRAGLADPNR 596 + + D R Sbjct: 590 VLTVFLQVFDEGR 602 Score = 313 bits (801), Expect = 2e-83, Method: Composition-based stats. Identities = 189/800 (23%), Positives = 344/800 (43%), Gaps = 68/800 (8%) Query: 84 SQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAGATTANITQAIEQM 143 S + +L L AQ + + E LA L+S + + + Q Sbjct: 4 SPGVSLILVLAVAEAQLTESSHLEPEHIFLALLKSEDISTETVPGMPQVSLAAATGEIQR 63 Query: 144 RGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPV 203 + + + + + + ++ R E+ + L + + + V Sbjct: 64 IAAFWQQEGISAKRLRRRLRAIVREMSKSRGEFSGHRSQRGRELFNKAETLAWQNQRDNV 123 Query: 204 LIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVL 263 + V + I + + + + L+ L+ ER + +L Sbjct: 124 TPFDLLV--------CSLEIESKAIDMLFQE---MNLERQKLL----------ERARELL 162 Query: 264 NDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALAR-GELHCVGATTLDEYRQY 322 + + I + H + G+ A+ L P + R E+ + R Sbjct: 163 AWTPETQRKEIS---QEHRLAKYGRDLTALARAGRLGPVIGRAEEIKQIA-------RIL 212 Query: 323 IEKDAALERRFQKVFVAEPSVEDTIAILRGLKER---------YELHHHVQITDPAIVAA 373 +++ + + +P V T AI GL + V+I+ A+++ Sbjct: 213 VQRSKN-----NPLLLGDPGVGKT-AIAEGLASYAASENAVTPLRDFYFVEISVAALLSG 266 Query: 374 ATLSHRY-------IADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQ 426 A ++ I + + +DE + + + + + Sbjct: 267 AMYRGQFEERVQEVIETARQDKNLVLFLDEIHTLMGSGAGGSSTLDAANMLKPALARGDI 326 Query: 427 QALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKAS--LSGTQTIKAELEQAKI 484 + + + + +K ++ + + + + L ++E Sbjct: 327 RCIGATTIDEYRKHIEPDGALARRFQIVWIDEPSPTETLHILRGLRSKMQEHHQIEIPDE 386 Query: 485 AIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEG---KTMRLLRNKVTDAEIAEVLA 541 A+++A + Q K + + A +L ++ + + +I +V+A Sbjct: 387 ALQKAVSLSGRYITDGYQPDKAITVLDEACARRRLLTIHVQSSPTQTSHLEVEDIGQVVA 446 Query: 542 RWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSF 601 R T IP+ +++S+ E+LL +E+EL RV+GQ+EAV V+ A+R SR GL P +PI Sbjct: 447 RRTQIPLEVILQSDEERLLHLEEELGKRVLGQDEAVRTVAEAVRISRVGLRAPGKPI-VL 505 Query: 602 LFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGY 661 +F GPTG GKTEL KAL+ +F ++ +DMSE+ E HSV++L+G+PPGY+G+ E Y Sbjct: 506 MFAGPTGTGKTELAKALSETLFFDPNRLITLDMSEYQESHSVAKLIGSPPGYIGFGEEPY 565 Query: 662 LTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLG 721 L +R PYSV+LLDE+EKAHP V + LQV D+GRLTD +GR ++ + I+TSNLG Sbjct: 566 LVRELRLHPYSVVLLDEIEKAHPSVLTVFLQVFDEGRLTDARGRRINCGEAIFILTSNLG 625 Query: 722 SDLIQERFGELDYAHMKEL--------VLGVVSHNFRPEFINRIDEVVVFHPLGEQHIAS 773 + + +R ++ V +++ PE +NR+ VVVF L E+ + + Sbjct: 626 ASIEVKRPIGFQGMEAEQHIAALVEANVKQIIAARLSPELVNRLQAVVVFRSLDEKTLDA 685 Query: 774 IAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQI 833 I + ++ L ++L ER I + A L E GY +GAR LKRA ++ I PL+++I Sbjct: 686 ILDLYVQGLNRQLAERQISIAMDASAKAFLIEQGYSAEFGARHLKRAFERLIAEPLSREI 745 Query: 834 LSGELVPGKVIRLEVNEDRI 853 LSG+L G+ I + ++ Sbjct: 746 LSGKLKAGQQIIFFMEAGQL 765 >UniRef50_D1PH53 ATP-dependent Clp protease, ATP-binding subunit ClpA n=1 Tax=Prevotella copri DSM 18205 RepID=D1PH53_9BACT Length = 761 Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats. Identities = 140/410 (34%), Positives = 235/410 (57%), Gaps = 11/410 (2%) Query: 453 RQYSELEEEWKAEKASLSGTQTIKAELEQA------KIAIEQARRVGDLARMSELQYGKI 506 R++ +++ + E+ ++ + ++ + + K A+E A R + K Sbjct: 354 RRFQQIDIKEPTEEEAIKILEGLQYKYNKFHNVTYRKDALEYAVRASAKYISNRCLPDKA 413 Query: 507 PELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQEL 566 +L + A ++ R R+ VT + I ++L + I + M + + L + Q + Sbjct: 414 IDLMDEAGAYLEVHPVESR-QRSYVTKSIIQQILIKVCKIDAAAMKDENNDALATLRQRI 472 Query: 567 HHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSD 626 ++ GQ++AVD V A+ ++AGL D ++P+ S LF+GPTGVGKTE+ + LA + Sbjct: 473 LDKIYGQDKAVDKVVEAVMMAKAGLTDDDKPLASLLFVGPTGVGKTEVARQLAKEL---G 529 Query: 627 EAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDV 686 +VR DMSE+ EKH+V++L+G+P GYVGYE+GG LT+A+R+ P V+LLDE+EKAH D+ Sbjct: 530 IELVRFDMSEYTEKHTVAKLIGSPAGYVGYEDGGLLTDAIRKTPNCVLLLDEIEKAHSDI 589 Query: 687 FNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE-RFGELDYAHMKELVLGVV 745 +NILLQV+D RLTD +G+ DFRN ++IMTSN G+ G E +L V Sbjct: 590 YNILLQVMDYARLTDNKGQKADFRNVILIMTSNAGAQYASRASVGFNGNVSRGEAMLAQV 649 Query: 746 SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSE 805 F+PEFINR+ ++VVF+ + + I +L++L +L +G + ++D A + L + Sbjct: 650 KKTFKPEFINRLSDMVVFNDMDKHMAELILAKKLRQLDAKLAAKGVTVTLTDAAREQLLK 709 Query: 806 NGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855 G+ YGAR + RAI +++ L + +L G+L G ++ + +V Sbjct: 710 WGFTKEYGAREMDRAIGNRLKPILMKALLFGKLKKGGKAHVDFDGKELVV 759 Score = 320 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 169/622 (27%), Positives = 289/622 (46%), Gaps = 47/622 (7%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M LT + + DA A D++F+ P H++ ALL Q + L G+++ ++ Sbjct: 1 MDSMGLTRYMSVLMDDAMKQARFFDHEFVMPEHMLLALLRQ--YAFCQALQEEGVDSFKM 58 Query: 61 RTDINQALNRLPQVEGTGGD-VQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESR 119 D+ L + +V T +PS + LA ++ FV A + Sbjct: 59 HEDLVGWLAKQERVPETIKYLPEPSSLFKTMFGTACALAAAADRQLVNVPHFVQAMFGLQ 118 Query: 120 GTLADIL--KAAGATTANITQAIEQMR----------------------GGESVNDQGAE 155 + A L K G +++ E +D+ Sbjct: 119 NSEAAFLLCKNVGDRQGEFLASVDSYYPIGEDTGEAGMGMGADFDDDDYANEYDDDEEEG 178 Query: 156 DQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAI 215 ++ + + + + +P+IGR++E+ RTIQVL R KNNP+ IGE GVGKTA+ Sbjct: 179 RRQVVQDWHQLVTCISDKVEEHNPLIGREQELDRTIQVLCRAEKNNPLHIGEAGVGKTAL 238 Query: 216 VEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVIL 275 V GLA+ I +VPE LKG R+ +DMG ++AGA+YRG+FE+R+K V+ K EGN I+ Sbjct: 239 VYGLAKLINENQVPERLKGARIYGMDMGQMLAGAQYRGDFEKRIKMVMEGAVK-EGNTII 297 Query: 276 FIDELHTMVGAGK-ADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ 334 +IDE+H M+GAG+ +DG DA NMLK L G++ +G+TT +EY +Y+ + + RRFQ Sbjct: 298 YIDEIHNMIGAGRGSDGGPDASNMLKQYLEAGDIRFIGSTTYEEYNRYMAQSKGIVRRFQ 357 Query: 335 KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI 394 ++ + EP+ E+ I IL GL+ +Y H+V A+ A S +YI++R LPDKAIDL+ Sbjct: 358 QIDIKEPTEEEAIKILEGLQYKYNKFHNVTYRKDALEYAVRASAKYISNRCLPDKAIDLM 417 Query: 395 DEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQ 454 DEA + + + ++ R + + QQ L+K + D N+ L+ ++ Sbjct: 418 DEAGAYLEV------HPVESRQRSYVTKSIIQQILIKVCKIDAAAMKDENNDALATLRQR 471 Query: 455 YSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLE 514 + + + + +A D ++ L + + K Sbjct: 472 ILDKIYGQDKAVDKVVEA-----------VMMAKAGLTDDDKPLASLLFVGPTGVGKTEV 520 Query: 515 AATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574 A + + L+R +++ +A+ G P + + L ++ + V+ + Sbjct: 521 ARQLAKELGIELVRFDMSEYTEKHTVAKLIGSPAGYVGYEDGGLLTDAIRKTPNCVLLLD 580 Query: 575 EAVDAVSNAIRRSRAGLADPNR 596 E ++ + I + D R Sbjct: 581 E-IEKAHSDIYNILLQVMDYAR 601 >UniRef50_A3A5U3 Putative uncharacterized protein n=2 Tax=Oryza sativa RepID=A3A5U3_ORYSJ Length = 691 Score = 320 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 172/480 (35%), Positives = 259/480 (53%), Gaps = 37/480 (7%) Query: 390 AIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELS 449 A +++ A + R++ + + E++ E S + L Sbjct: 192 ASNMLKPALARGRVRCLGATTHDEYHRYMVRDAAFERRFQKVHVAEPSVDDTVAILRRLK 251 Query: 450 DKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPEL 509 + + S ++ A AR + D + + Q P+ Sbjct: 252 PSYQDHHAWISRTPPSSPPPSSPVATSQAIDLVDEACATARLLMDRRKKKQAQAAVAPK- 310 Query: 510 EKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHR 569 + + +A+WTGIPV+ + E ER+KLL + Q LH R Sbjct: 311 ----------------------DENVGPDHIAQWTGIPVASLGEDERKKLLELPQLLHRR 348 Query: 570 VIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAM 629 VIGQ+EAV AV+ A+ RSR+GL +PN+P GSFLFLGPTGV KTEL KALA +F + + + Sbjct: 349 VIGQDEAVGAVAEAVVRSRSGLGNPNQPSGSFLFLGPTGVSKTELAKALAEQLFGNAKLL 408 Query: 630 VRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNI 689 VRIDMSE++ SV+RL+G+ PG GY++GG LTE VR RPYSV+L DEVEKA VFN+ Sbjct: 409 VRIDMSEYVNASSVTRLIGSAPGTNGYDKGGQLTELVRCRPYSVVLFDEVEKADAAVFNV 468 Query: 690 LLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFG----------ELDYAHMKE 739 LQ+LDDGRLTDGQGRTVDF NT++IMTSNLG+ + + E A K+ Sbjct: 469 FLQILDDGRLTDGQGRTVDFTNTIIIMTSNLGAQHLADAAAADASHKDDATEAAAAAAKQ 528 Query: 740 LVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEA 799 VL V +FRPE I+R+ E+VVF PL + + +A++QL+ + RL E+G + +++ A Sbjct: 529 RVLADVQRHFRPELISRLTEMVVFRPLSGEQLRKVARLQLRGMAARLAEKGIGLDVANAA 588 Query: 800 LKLLSENGYD--PVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVN--EDRIVA 855 L ++ D YGARP+KR +++ + +++ ++ E + +E + ++ +V Sbjct: 589 LDVVLARSSDQVRAYGARPIKRCLEKDVMTRISKMVVQEEADDDCYVTVEADQGKEELVF 648 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 145/460 (31%), Positives = 220/460 (47%), Gaps = 23/460 (5%) Query: 142 QMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNN 201 + + L + DLT A DPV+GR+EEI R + +L R++KN+ Sbjct: 36 HKDPPPPPPPRQPAAAKGTLDAFGRDLTAEAAN--ADPVVGREEEIDRVVCILSRKSKNS 93 Query: 202 PVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKG 261 VL+G GVGKTAI EGLAQRI GEV L+G RV+ L++ A+++G YRG FEER+ G Sbjct: 94 AVLVGAAGVGKTAIAEGLAQRIARGEVSGVLEGARVVELNVAAMISGTSYRGTFEERMTG 153 Query: 262 VL----NDLAKQEGNVILFIDELHTMVGAGKADGA-MDAGNMLKPALARGELHCVGATTL 316 V+ + G V+LF+DE+H ++GAG+ G +DA NMLKPALARG + C+GATT Sbjct: 154 VIAEAEAEADAAAGKVVLFVDEIHMLLGAGRVSGGCIDASNMLKPALARGRVRCLGATTH 213 Query: 317 DEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATL 376 DEY +Y+ +DAA ERRFQKV VAEPSV+DT+AILR LK Y+ HH A ++ Sbjct: 214 DEYHRYMVRDAAFERRFQKVHVAEPSVDDTVAILRRLKPSYQDHH-------AWISRTPP 266 Query: 377 SHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEA 436 S + +AIDL+DEA ++ R+ +D + ++ + + + + + Sbjct: 267 SSPPPSSPVATSQAIDLVDEACATARLLMDRRKKKQAQAAVAPKDENVGPDHIAQWTGIP 326 Query: 437 SKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLA 496 L + ER+ + + + Sbjct: 327 VAS--------LGEDERKKLLELPQLLHRRVIGQDEAVGAVAEAVVRSRSGLGNPNQPSG 378 Query: 497 RMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESER 556 L + + E A QL G L+R +++ A + R G + Sbjct: 379 SFLFLGPTGVSKTELAKALAEQLFGNAKLLVRIDMSEYVNASSVTRLIGSAPGTNGYDKG 438 Query: 557 EKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNR 596 +L + + + V+ +E V+ A+ + D R Sbjct: 439 GQLTELVRCRPYSVVLFDE-VEKADAAVFNVFLQILDDGR 477 >UniRef50_A7H2P9 ATP-dependent Clp protease, ATP-binding subunit ClpA n=16 Tax=Campylobacter RepID=A7H2P9_CAMJD Length = 709 Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats. Identities = 164/564 (29%), Positives = 267/564 (47%), Gaps = 44/564 (7%) Query: 5 RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSA-GINAGQLRTD 63 + Q L +A++L+L + ++F+ H++ ALL + + L T+ Sbjct: 2 KYQENLQKYLDNAKNLSLINHHEFVTCEHVLFALLKLST-DFKDIFEEFSDGDLELLETE 60 Query: 64 INQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLA 123 + +++ +V + S L +L L++ + + + +SR + Sbjct: 61 LKNHISQNNKVIKQEIEPTISVVLDEIL----LLSKNKNNEIKIIDFLEKLIQDSRSYSS 116 Query: 124 DILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGR 183 +LK I + + Q L +T DLT A+ GK+DP+IGR Sbjct: 117 YLLKKHNINLNKIQELQ-------------NHENIQNLSNHTSDLTLLAQNGKIDPLIGR 163 Query: 184 DEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMG 243 E+ R +Q+L RR KNNP+L+GE GVGKTAIVEGLA I +VP+ L+ ++ +LDM Sbjct: 164 KFELERMMQILSRRKKNNPILVGEAGVGKTAIVEGLALAIAEKKVPKNLQNAKIFSLDMA 223 Query: 244 ALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGA-MDAGNMLKPA 302 +++AG KYRG+FE+R+K +LN+L K N ILFIDE+HT+VGAG + D N+LKPA Sbjct: 224 SILAGTKYRGDFEKRIKEILNELEKIP-NAILFIDEIHTIVGAGSTGESHTDFSNLLKPA 282 Query: 303 LARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHH 362 L+ G L C+GATT EY+ +K+ L RRF K+ V EPS E+++ IL+GLK +YE HH Sbjct: 283 LSNGTLKCIGATTFMEYKNTFDKNKPLSRRFAKINVDEPSQEESLQILKGLKNKYEEFHH 342 Query: 363 VQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQID-SKPEELDRLDRRIIQ 421 +++ D + A ++ D+ LPD AIDL+DE +S + K L L + + Sbjct: 343 IKLNDEILQYAVIWGKKFFNDKFLPDCAIDLVDELGASFALNPKAKKNANLKDLKNVLAK 402 Query: 422 LKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQ 481 + + + ++A L ++ ++ L K A + T + Sbjct: 403 MTHHHKMFEFDQNKALMNLKTNLKAKIFGQDEVIDSLVSSLKQSFAGFKNSNTPRG---- 458 Query: 482 AKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLA 541 + + EL K L L L R +++ ++ Sbjct: 459 -------------VFLFTGSSGVGKTELCKALAEFLGL-----NLERFDMSEYAEKHAIS 500 Query: 542 RWTGIPVSRMMESEREKLLRMEQE 565 + G P + E L ++ Sbjct: 501 KLIGSPAGYIGFEEGGLLSNAIRK 524 Score = 289 bits (738), Expect = 4e-76, Method: Composition-based stats. Identities = 130/422 (30%), Positives = 224/422 (53%), Gaps = 21/422 (4%) Query: 431 KESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQAR 490 + ++ +R +N + +E K K IK E + A+ + Sbjct: 303 FDKNKPLSRRFAKINVDEPSQEESLQ----ILKGLKNKYEEFHHIKLNDEILQYAVIWGK 358 Query: 491 RVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSR 550 + + + + + EL + + ++ VLA+ T Sbjct: 359 KFFNDKFLPDCAIDLVDELGASFALNPKAKKNAN--------LKDLKNVLAKMTHH-HKM 409 Query: 551 MMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVG 610 + + L+ ++ L ++ GQ+E +D++ +++++S AG + N P G FLF G +GVG Sbjct: 410 FEFDQNKALMNLKTNLKAKIFGQDEVIDSLVSSLKQSFAGFKNSNTPRGVFLFTGSSGVG 469 Query: 611 KTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRP 670 KTELCKALA F+ + R DMSE+ EKH++S+L+G+P GY+G+EEGG L+ A+R+ P Sbjct: 470 KTELCKALAEFL---GLNLERFDMSEYAEKHAISKLIGSPAGYIGFEEGGLLSNAIRKNP 526 Query: 671 YSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFG 730 +S++L DE+EKAHPD+ N LQ+ D+ LTD G VDF+NT++IMTSNLG E Sbjct: 527 FSLVLFDEIEKAHPDLSNTFLQIFDNAELTDNSGLKVDFKNTIIIMTSNLGLKESNELGF 586 Query: 731 ELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERG 790 + +E + F PEFINRID+++ F+ L + + I + +L + K L Sbjct: 587 ---LSKNEEKSNRAIKDFFAPEFINRIDKILHFNDLNDAILVKIIEKELDEISKNL--NN 641 Query: 791 YEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNE 850 ++ + D+A L++ Y+ +G R LKR I ++I ++ +IL G+L G + ++++ + Sbjct: 642 IKLSVDDKAKIYLAKKAYNKEFGVRLLKRIISEEIGEKISDEILFGKLKKGGIAKIKLGK 701 Query: 851 DR 852 + Sbjct: 702 NG 703 >UniRef50_UPI0001973947 ATP-dependent Clp protease, ATP-binding subunit ClpA n=3 Tax=Clostridiales RepID=UPI0001973947 Length = 801 Score = 318 bits (814), Expect = 7e-85, Method: Composition-based stats. Identities = 170/636 (26%), Positives = 284/636 (44%), Gaps = 84/636 (13%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL 60 M +D + + A A +++ P + + ++ G + G+L Sbjct: 2 MEID---EEVARVFSGAVKEAGERGLEYVTPELFLLKIADEP--MFREAFEECGGDCGEL 56 Query: 61 RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG 120 ++ + + + PS DL +L + Q G I + A Sbjct: 57 KSKLEAYIREQVPASDGKKEPVPSADLNELLFYTELTTQNCGKRSIDLNHLIAAYYHLEN 116 Query: 121 TLA------------DILKAAGATTANITQAIEQMR------------------------ 144 + A ++L + E+ Sbjct: 117 SFALYYLMEQGIEKAELLLELIESGEKWEGEYEEYEVHEGGDNSEEWEEYYAREYELEKR 176 Query: 145 -------------------GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDE 185 G E + E +R+ + Y L + + P+IGR++ Sbjct: 177 REELMRGGGKRTEGKNDDGGEEDIPFGSTEKKREKWRDYVTCLNDSLSD--VSPLIGRED 234 Query: 186 EIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGAL 245 E+ RT+Q+L RR KNNP+ IGEPGVGKTAI GLA+ + +VPE LKG R+ +LD+GA+ Sbjct: 235 ELERTMQILCRREKNNPLHIGEPGVGKTAIAYGLARLLEEEKVPEALKGARIYSLDLGAM 294 Query: 246 VAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGK-ADGAMDAGNMLKPALA 304 +AG +YRGEFE+RLK VL L ++E ++ ++DE+H +VGAG +G+ DA N+LKP LA Sbjct: 295 IAGTQYRGEFEKRLKSVLAGLEREEKPIV-YLDEIHNIVGAGAVGEGSFDASNLLKPYLA 353 Query: 305 RGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQ 364 G + +GATT +EY+++ EK +L RRFQ + ++EP E+T+ IL GL++ YE +H V Sbjct: 354 AGRIRFIGATTHEEYKKHFEKSKSLVRRFQNIEISEPGEEETVKILEGLRKHYEKYHGVS 413 Query: 365 ITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKL 424 + A +S RYI +R LPDKAIDLIDEA + ++ + ++ + ++ Sbjct: 414 YKKGVMEYAVHMSARYINERFLPDKAIDLIDEAGAYRKLHPLPQ-------KKQTVGKEV 466 Query: 425 EQQALMKESDEASKKRLDMLNEELSDKERQYSE-LEEEWKAEKASLSGTQTIKAELEQAK 483 + L K K ++L+ ER+ S + + +A K ++ + +A L +A Sbjct: 467 IDEILSKTCRIPKKVVESGEIKKLAGLERRLSACVFGQDEAIKEVVNAIKFSRAGLSEAG 526 Query: 484 IAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARW 543 + VG + K A + +RL+R +++ E +A+ Sbjct: 527 KPLASFLFVGPTG------------VGKTEIARSLASELGIRLIRFDMSEYEEKHAVAKL 574 Query: 544 TGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDA 579 G P + E L ++ H V+ +E A Sbjct: 575 IGAPAGYVGYEEGGLLTEAVRKNPHAVLLLDEIEKA 610 Score = 313 bits (801), Expect = 2e-83, Method: Composition-based stats. Identities = 220/813 (27%), Positives = 347/813 (42%), Gaps = 69/813 (8%) Query: 82 QPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAGATTANITQAIE 141 + +++ RV + K A +RG +++ ELF+L + + G + +E Sbjct: 3 EIDEEVARVFSGAVKEAGERGLEYVTPELFLLKI-ADEPMFREAFEECGGDCGELKSKLE 61 Query: 142 QMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKL--DPVIGRDEEIRRTIQVLQRRTK 199 + G ++ + DL E +L R ++ I Sbjct: 62 AYIREQVPASDGKKEPVP-----SADLNELLFYTELTTQNCGKRSIDLNHLIAAYYHLEN 116 Query: 200 NNPVL-IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEER 258 + + + E G+ K E L + I +GE EG + + G E+EE Sbjct: 117 SFALYYLMEQGIEK---AELLLELIESGEKWEG-------EYEEYEVHEGGDNSEEWEEY 166 Query: 259 LKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDA---GNMLKPALARGELHCV---- 311 +L K+ L G G D K R + C+ Sbjct: 167 YAREY-ELEKRREE--LMRGGGKRTEGKNDDGGEEDIPFGSTEKKREKWRDYVTCLNDSL 223 Query: 312 -----GATTLDEYRQYIEKDAALERR--FQKVFVAEPSVEDTIAILRGLKERYELHHHVQ 364 DE + ++ L RR + + EP V T AI GL E + Sbjct: 224 SDVSPLIGREDELERTMQ---ILCRREKNNPLHIGEPGVGKT-AIAYGLARLLEEEKVPE 279 Query: 365 ITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKL 424 A + + L IA Q + + + + + + + Sbjct: 280 ALKGARIYSLDLGA-MIAGTQYRGEFEKRLKSVLAGLEREEKPIVYLDEIHNIVGAGAVG 338 Query: 425 EQQ------ALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAE 478 E + + +EE + L ++ + S G + Sbjct: 339 EGSFDASNLLKPYLAAGRIRFIGATTHEEYKKHFEKSKSLVRRFQNIEISEPGEEETVKI 398 Query: 479 LEQAKIAIEQ-------------ARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMR 525 LE + E+ A + K +L + A +L + Sbjct: 399 LEGLRKHYEKYHGVSYKKGVMEYAVHMSARYINERFLPDKAIDLIDEAGAYRKL--HPLP 456 Query: 526 LLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIR 585 + V I E+L++ IP + E +KL +E+ L V GQ+EA+ V NAI+ Sbjct: 457 QKKQTVGKEVIDEILSKTCRIPKKVVESGEIKKLAGLERRLSACVFGQDEAIKEVVNAIK 516 Query: 586 RSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSR 645 SRAGL++ +P+ SFLF+GPTGVGKTE+ ++LA+ + ++R DMSE+ EKH+V++ Sbjct: 517 FSRAGLSEAGKPLASFLFVGPTGVGKTEIARSLASEL---GIRLIRFDMSEYEEKHAVAK 573 Query: 646 LVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGR 705 L+GAP GYVGYEEGG LTEAVR+ P++V+LLDE+EKAH D++NILLQV+D LTD QGR Sbjct: 574 LIGAPAGYVGYEEGGLLTEAVRKNPHAVLLLDEIEKAHSDIYNILLQVMDYATLTDNQGR 633 Query: 706 TVDFRNTVVIMTSNLGSDLIQERF----GELDYAHMKELVLGVVSHNFRPEFINRIDEVV 761 DFRN V+IMTSN G+ + + +++ V+ F+PEF NR+ +V Sbjct: 634 KADFRNIVLIMTSNAGASRLTKARLGFGDGAGADGRGSVIMDEVNRVFQPEFRNRLSRIV 693 Query: 762 VFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAI 821 VF + E+ IA +L+ L L ER E + +A LL++ G YGAR L R I Sbjct: 694 VFDGIDERTAREIAGKKLRELGALLSERQVEFSFTRQAEALLTKKGVSREYGARELTRVI 753 Query: 822 QQQIENPLAQQILSGELVPGKVIRLEVNEDRIV 854 +++I+ LA ++L G L G RL+V + V Sbjct: 754 EREIKPLLADRLLFGSLKRGGFCRLDVKDGAFV 786 >UniRef50_A9FU98 Endopeptidase ATPase with chaperone activity,two ATP-bindingdomains n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FU98_SORC5 Length = 945 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 160/340 (47%), Positives = 209/340 (61%), Gaps = 13/340 (3%) Query: 515 AATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQN 574 A +V AE+AEV++ +PV R++E++RE++L +E L V+G Sbjct: 578 HAAHAALHEPAQPARQVGPAEVAEVVSELADLPVERLLETDRERMLSLETLLAENVVGHG 637 Query: 575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDM 634 EA+ ++ +RR+ AGL RPIGSFL LGPTGVGKTE KA+A +F S +AM R+D Sbjct: 638 EALSRIARVLRRNAAGLR-ARRPIGSFLLLGPTGVGKTETAKAIAEALFHSPDAMTRLDF 696 Query: 635 SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVL 694 SE+ E H+V+RLVGAPPGYVG+E GG LTEAVRRRPY V+LLDE+EKAH DV LQV Sbjct: 697 SEYAESHAVARLVGAPPGYVGHEAGGQLTEAVRRRPYQVVLLDEIEKAHRDVLEAFLQVF 756 Query: 695 DDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK-----------ELVLG 743 D+GRLTDG+GR VDF NTV++MTSNLG+ E + E +L Sbjct: 757 DEGRLTDGRGRRVDFTNTVLVMTSNLGAAEAGALRSERSVGFARSSSAVSPERLGETMLS 816 Query: 744 VVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLL 803 PE NRIDEV+ F PL +A I + L L + LE RG E+ + EA+ L Sbjct: 817 AARAALPPELYNRIDEVLCFAPLTRADVAEITRRLLGGLERELEARGVELEVEPEAIDAL 876 Query: 804 SEN-GYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGK 842 + G+DP GARP+KR I + +E PLA+ IL G+L G Sbjct: 877 LDAGGFDPELGARPMKRTIARLVEAPLAELILRGQLEEGS 916 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 119/452 (26%), Positives = 196/452 (43%), Gaps = 20/452 (4%) Query: 154 AEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKT 213 + AL +L+ A QG+L+P++GR+ EI + + VL +R NNP L+G GVGKT Sbjct: 320 DRARFPALASLGHNLSLAAVQGELEPIVGREHEIEQALDVLAKRHANNPCLLGPAGVGKT 379 Query: 214 AIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNV 273 ++ G+A R+ + + R V+ L L+AG RG ERL + +++ + G V Sbjct: 380 SVARGVAHRLAF----DEREPRVVVELVPSELLAGTGARGALSERLSALRSEVREAGGRV 435 Query: 274 ILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRF 333 ILFID L + G+G D AM +K ALARGEL +G T +EYR+ IE D AL RRF Sbjct: 436 ILFIDGLSELFGSGALDEAM---AEIKLALARGELTMIGTATPEEYRKSIEVDPALARRF 492 Query: 334 QKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDL 393 V + EP ++ +L+ + HH + TD A+ +A S RY+ R LPDKA+ + Sbjct: 493 TIVEIDEPEEDEAFLLLQSVAVGLGAHHGLAFTDEALASAVAWSVRYLPGRALPDKALSI 552 Query: 394 IDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNE------- 446 +D A + R + S + + ++++E Sbjct: 553 LDLAGARTRRRASSASRASRASRTSHAAHAALHEPAQPARQVGPAEVAEVVSELADLPVE 612 Query: 447 --ELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYG 504 +D+ER S + I L + + R +G + G Sbjct: 613 RLLETDRERMLSLETLLAENVVGHGEALSRIARVLRRNAAGLRARRPIGSFLLLGPTGVG 672 Query: 505 KIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQ 564 K + EA + R ++ + +AR G P + +L + Sbjct: 673 KTETAKAIAEALFHSPD---AMTRLDFSEYAESHAVARLVGAPPGYVGHEAGGQLTEAVR 729 Query: 565 ELHHRVIGQNEAVDAVSNAIRRSRAGLADPNR 596 ++V+ +E ++ + + + D R Sbjct: 730 RRPYQVVLLDE-IEKAHRDVLEAFLQVFDEGR 760 >UniRef50_D1Z247 ATP-dependent Clp protease ATP-binding subunit ClpA homolog n=1 Tax=Methanocella paludicola SANAE RepID=D1Z247_METPS Length = 782 Score = 315 bits (806), Expect = 6e-84, Method: Composition-based stats. Identities = 191/633 (30%), Positives = 283/633 (44%), Gaps = 49/633 (7%) Query: 1 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGS--------------V 46 M RLT + A A ++ IE HL +++ + + Sbjct: 1 MDTIRLTAGASRSWDIAAEEASRSRSRVIEKEHLFIGIMSLDKAVDTADPGPIKAEMDAI 60 Query: 47 SPLLTSA---GINAGQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGD 103 +L A A +R + +AL + + + S++ + L+ Sbjct: 61 RNVLEGACDRPSPAAVIRRGVRKALGSADKSQEPRVFHR-SEECKALFRRAGGLS--YAR 117 Query: 104 NFISSELFVLAALESRGTLADI-LKAAGATTANITQA------------------IEQMR 144 N ISS + A LE G + L AG ++ + +E+ Sbjct: 118 NEISSLHLLAAILECPGPAIEAALSGAGIDFRDMMEPAYAWIAILEGGDKQFQRSMEKKE 177 Query: 145 GGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVL 204 +VND L+K+ DLT A G+L P R +E+ + IQVL RR KNNPVL Sbjct: 178 ISSAVNDWLGLKHGGYLEKHGRDLTREAMAGRLGPFSERKKELLQLIQVLGRRAKNNPVL 237 Query: 205 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 264 IGE GVGKTA+VE LA RI G+ L G+R++ L M +LVA KYRG+ EERL GVL+ Sbjct: 238 IGEAGVGKTAVVEALAMRIARGKDAHVLGGKRIIQLSMASLVANTKYRGDLEERLTGVLD 297 Query: 265 DLAKQEGNVILFIDELHTMVGAGKADGA-MDAGNMLKPALARGELHCVGATTLDEYRQYI 323 + G ++LFIDE+HT+VGAG++DG+ +DA N+LKP L RG L C+G +T+ EY ++I Sbjct: 298 EAVADPG-IVLFIDEIHTVVGAGRSDGSALDASNILKPYLVRG-LRCIGTSTIAEYHRHI 355 Query: 324 EKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIAD 383 E D ALERRF+ + V EP E+ +A+L L+ + E HH V+I D A+ A+ LS R+ A+ Sbjct: 356 EADPALERRFETILVEEPCREEALAMLGTLRPKLEEHHGVRILDEALEASVDLSMRFDAE 415 Query: 384 RQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDM 443 LPDKA+DL+D A S R+ + S + + + E A Sbjct: 416 HMLPDKAVDLLDMACSGARIPVLSMGSMDEPRRQVDARSIAETLAGSAGMPLELAASH-- 473 Query: 444 LNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQY 503 E R + L A IE+ R G LA Sbjct: 474 --LEGPTTSRLLGLEGFLRGRLAGQEEAIAKVSKRLMVAYSGIEK--RQGPLAVFLFTGP 529 Query: 504 GKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRME 563 + + E A L G ++R +++ +AR G P + E L+RM Sbjct: 530 TGVGKTETARLLAEFLFGSPSEMIRLDLSEYSEENSVARLIGSPPGYIGYEESGLLVRML 589 Query: 564 QELHHRVIGQNEAVDAVSNAIRRSRAGLADPNR 596 + + V +E V+ + L D R Sbjct: 590 RARPYTVALFDE-VEKAHPRVFDVFLQLFDEGR 621 Score = 305 bits (781), Expect = 4e-81, Method: Composition-based stats. Identities = 149/423 (35%), Positives = 222/423 (52%), Gaps = 24/423 (5%) Query: 452 ERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEK 511 ER++ + E + +L+ T++ +LE+ + +S + +K Sbjct: 362 ERRFETILVEEPCREEALAMLGTLRPKLEEHHGVRILDEALEASVDLSMRFDAEHMLPDK 421 Query: 512 QLEAATQLEGKTMRLL---------RNKVTDAEIAEVLARWTGIPVSR----MMESEREK 558 ++ + R +V IAE LA G+P+ + + Sbjct: 422 AVDLLDMACSGARIPVLSMGSMDEPRRQVDARSIAETLAGSAGMPLELAASHLEGPTTSR 481 Query: 559 LLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL 618 LL +E L R+ GQ EA+ VS + + +G+ P+ FLF GPTGVGKTE + L Sbjct: 482 LLGLEGFLRGRLAGQEEAIAKVSKRLMVAYSGIEKRQGPLAVFLFTGPTGVGKTETARLL 541 Query: 619 ANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDE 678 A F+F S M+R+D+SE+ E++SV+RL+G+PPGY+GYEE G L +R RPY+V L DE Sbjct: 542 AEFLFGSPSEMIRLDLSEYSEENSVARLIGSPPGYIGYEESGLLVRMLRARPYTVALFDE 601 Query: 679 VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMK 738 VEKAHP VF++ LQ+ D+GR+TD +GRT D RN + I+TSNL E G + Y M+ Sbjct: 602 VEKAHPRVFDVFLQLFDEGRITDSKGRTADARNAIFILTSNL------EPGGGVSYEEME 655 Query: 739 ELVLGVVSH----NFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKR-LYKRLEERGYEI 793 E + F+PE INRIDE+V F PL + + + L L + + Sbjct: 656 EGMKRRPRKKGLETFKPELINRIDEIVSFRPLDVDAVRRLLRKTLTETLAELERTHHVAL 715 Query: 794 HISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRI 853 +SDEA L+ GY P YGAR L+R ++Q I PL++ IL+GEL + ++D I Sbjct: 716 RLSDEAEDYLARAGYSPEYGARELRRVVRQFIYVPLSRLILTGELKAHRRWLAVYDDDGI 775 Query: 854 VAV 856 V Sbjct: 776 TIV 778 >UniRef50_A7I2C9 ATP-dependent CLP protease ATP-binding subunit n=3 Tax=Campylobacter RepID=A7I2C9_CAMHC Length = 729 Score = 311 bits (796), Expect = 8e-83, Method: Composition-based stats. Identities = 149/593 (25%), Positives = 267/593 (45%), Gaps = 44/593 (7%) Query: 14 LADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQALNRLPQ 73 + +A + N ++ H++ + + G+ + I Q + P+ Sbjct: 10 FKNGVRVARKYRNNYLTTYHILFSFFRYD--VFKEFFYYYGM-QNDVGETIRQIIENFPK 66 Query: 74 VEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESR------------GT 121 + ++ + +L ++N +++ + + LA + Sbjct: 67 SKN--KKLKMTTELKYLINQINEIGTNKNEYEDIFRFMFLARKMDENYRELFDFITPNDS 124 Query: 122 LADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVI 181 + N EDQR L+ + +L E A GKLD +I Sbjct: 125 YESLSLTFFEWLKRQKSIPMAEFLDSFENQDENEDQRSPLEIWGRNLCEEARLGKLDKLI 184 Query: 182 GRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALD 241 GR++E+ +T+Q L RR KNNP+L+GE GVGKTA+VEG+AQ+I + PE LK + + ++ Sbjct: 185 GREKEVEKTLQTLCRRKKNNPLLVGEAGVGKTAVVEGIAQKIAFNDGPEKLKNKEIYEIN 244 Query: 242 MGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAM-DAGNMLK 300 + +++AG YRG+FE+R+ ++++L K + NVI+F DE+HT++GAG G+ D + LK Sbjct: 245 LTSMLAGTTYRGDFEQRVNDLIDEL-KNKKNVIIFFDEIHTILGAGSTGGSDADLADALK 303 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELH 360 PALA GE+ C+GATT E+R KD AL RRF K+ + EP++ED+ IL+G RYE Sbjct: 304 PALANGEISCIGATTYAEFRD-FGKDKALLRRFNKIDICEPTLEDSFKILKGGAPRYENF 362 Query: 361 HHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRII 420 H V+ +D + LS +Y++D+ LPD A DLIDE +S ++ D + + + Sbjct: 363 HGVKFSDEILNECVRLSKKYLSDKFLPDSAFDLIDEIGASFSLKGRHGEVSQDDVRKILS 422 Query: 421 QLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELE 480 + + + ++ E K L E+ ++ L + A + Sbjct: 423 VM-ANAENINSDNSEILKNLKTNLKSEIFGQDSAVDTLYKALLRSYAGIKDENRPIG--- 478 Query: 481 QAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVL 540 + + EL K L + + LR +++ + Sbjct: 479 --------------VFLFTGNSGVGKTELAKVLANSL-----NVSFLRFDMSEYMEENSV 519 Query: 541 ARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLAD 593 +++ G + + L ++ + V+ +E ++ + I G+ D Sbjct: 520 SKFIGSAPGYVGFEQGGILTNAVKKHPYSVLLFDE-IEKANPTIINIFLGIFD 571 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 125/409 (30%), Positives = 212/409 (51%), Gaps = 19/409 (4%) Query: 447 ELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKI 506 ++ E + + K +K E + +++ + + + I Sbjct: 337 KIDICEPTLEDSFKILKGGAPRYENFHGVKFSDEILNECVRLSKKYLSDKFLPDSAFDLI 396 Query: 507 PELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQEL 566 E+ +++ +V+ ++ ++L+ + E L ++ L Sbjct: 397 DEIGASF---------SLKGRHGEVSQDDVRKILSVMAN--AENINSDNSEILKNLKTNL 445 Query: 567 HHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSD 626 + GQ+ AVD + A+ RS AG+ D NRPIG FLF G +GVGKTEL K LAN + + Sbjct: 446 KSEIFGQDSAVDTLYKALLRSYAGIKDENRPIGVFLFTGNSGVGKTELAKVLANSL---N 502 Query: 627 EAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDV 686 + +R DMSE+ME++SVS+ +G+ PGYVG+E+GG LT AV++ PYSV+L DE+EKA+P + Sbjct: 503 VSFLRFDMSEYMEENSVSKFIGSAPGYVGFEQGGILTNAVKKHPYSVLLFDEIEKANPTI 562 Query: 687 FNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVS 746 NI L + D+ L+D G DF+NT++IM+SNLG+ + D E + V Sbjct: 563 INIFLGIFDNASLSDNLGEKADFKNTIIIMSSNLGTKEAATLGFKRDT---AEKINTAVH 619 Query: 747 HNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSEN 806 F PE RID+++ F+PL + + I +K L +L + + + + A + L + Sbjct: 620 DFFSPELRARIDKIINFNPLNNEILKQIVDKYIKNLENKL--KNVKFDLDENAKEFLIKK 677 Query: 807 GYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855 G + GAR LKR I +I + ++ +IL G+L G +++ +++ Sbjct: 678 GANTESGARNLKRIIDGEISDIISGEILFGKLKNGGTVKISTENEKLTF 726 >UniRef50_A6G5U6 AAA ATPase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G5U6_9DELT Length = 742 Score = 308 bits (789), Expect = 5e-82, Method: Composition-based stats. Identities = 149/385 (38%), Positives = 233/385 (60%), Gaps = 7/385 (1%) Query: 479 LEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAE 538 LEQ + ++ + +L R++E + + L+ +T R R V Sbjct: 359 LEQHGLGLDNDAHLHELTRIAERFLTGLAMPGRALDLLDLSCARTTREGRASVGRDTWLT 418 Query: 539 VLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPI 598 ++ TG+P SR+ S LL ++ L +V+G ++A+++ +RR+RAG + RPI Sbjct: 419 IVCERTGLPRSRVEGSSERDLLDLDAVLARQVVGHEHVLEALASLVRRNRAGFSS-GRPI 477 Query: 599 GSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEE 658 S L LGP+GVGKTE+ KALA+ +++ D+A++R+DMSE+ E H+V+R+VGAPPGYVG+E+ Sbjct: 478 ASVLLLGPSGVGKTEIAKALASALYERDDALLRLDMSEYAEAHAVARVVGAPPGYVGHEQ 537 Query: 659 GGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTS 718 GG LT+ + R P+ V+LLDE+EK+H DV +LLQV D+GRLTDG+GRT+DFR+ VVIMTS Sbjct: 538 GGALTDPLLRNPHRVVLLDEIEKSHRDVHQLLLQVFDEGRLTDGRGRTIDFRHAVVIMTS 597 Query: 719 NLGSDLIQER----FGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASI 774 NLG++L+ + G+ D VL +F E NRI+ +V PL + + +I Sbjct: 598 NLGAELMFDLDLGPNGDGDALPDDAEVLDRARSHFPVELWNRIEAPLVLRPLTREQMLAI 657 Query: 775 AQIQLKRLYKRL-EERGYEIHISDEALKLLSEN-GYDPVYGARPLKRAIQQQIENPLAQQ 832 ++ + KRL +RG + DE L+ L E G DP GARPL+ I +++E+ +A + Sbjct: 658 SRRLIASSSKRLTRDRGIRYRVEDEVLERLIERAGIDPALGARPLRHLIGREVESLVADE 717 Query: 833 ILSGELVPGKVIRLEVNEDRIVAVQ 857 IL G + G+ + + +E + Sbjct: 718 ILRGRVRAGEEVVVRFDERGALICS 742 Score = 98.0 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 83/558 (14%), Positives = 173/558 (31%), Gaps = 68/558 (12%) Query: 35 MSALLNQEGGSVSPLLTSAGINAGQLRTDINQALNRLPQVEGTGGDVQ----------PS 84 + A++ L AG + +LR + + + + T G V+ S Sbjct: 53 LLAIVRSADCHAYQALRLAGADMVRLRKLLIERVRERGRERATRGPVRGRSHPGSPSSSS 112 Query: 85 QDLVRVLNLCDKLAQKRGDNFISSELFVLAALE-SRGTLADILKAAGATTANITQAIEQM 143 + L+ + A + + + Sbjct: 113 PVRMSSTRRSAALSSRPAPPSPRQSHQHGAPYPAQPEPAPSQREPMALRPDASASTLAKA 172 Query: 144 RGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPV 203 V+++ A ++ + G L P++GR+ E+ L RR P+ Sbjct: 173 TPAPEVHERSAPRTQKGPAEL-----RSIHPGSLPPLVGRERELATLADALLRRGPRPPL 227 Query: 204 LIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVL 263 L+GE G G+T + LA+ + R V L+ GE E + Sbjct: 228 LVGEHGSGRTCVATHLARVL----------DRPVFRLEAPHYDEDDNLLGEDLELI---- 273 Query: 264 NDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALAR----GELHCVGATTLDEY 319 E ++ D+L + + D + PALAR G+ + + + Sbjct: 274 -----AEAQGVVVFDDLDRV--------SSDQPPAMLPALARAWATGQPRILTVVSHESR 320 Query: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPA-IVAAATLSH 378 + + + ++ D ++ H + + + A + ++ Sbjct: 321 ARLEAWMPGILDTLDVLPLSALEGGDVHQAVKLAAPAVLEQHGLGLDNDAHLHELTRIAE 380 Query: 379 RYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASK 438 R++ +P +A+DL+D + + + + L + L + + S+ Sbjct: 381 RFLTGLAMPGRALDLLDLSCARTTREGRASVGRDTWLTIVCERTGLPRSRVEGSSERDLL 440 Query: 439 KRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARM 498 +L ++ E L + + + R + + + Sbjct: 441 DLDAVLARQVVGHEHVLEALASL-----------------VRRNRAGFSSGRPIASVLLL 483 Query: 499 SELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREK 558 GK E+ K L +A LLR +++ A +AR G P + + Sbjct: 484 GPSGVGK-TEIAKALASALYERDDA--LLRLDMSEYAEAHAVARVVGAPPGYVGHEQGGA 540 Query: 559 LLRMEQELHHRVIGQNEA 576 L HRV+ +E Sbjct: 541 LTDPLLRNPHRVVLLDEI 558 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.312 0.123 0.298 Lambda K H 0.267 0.0377 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,976,264,189 Number of Sequences: 3077464 Number of extensions: 158853237 Number of successful extensions: 883587 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 1674 Number of HSP's successfully gapped in prelim test: 11485 Number of HSP's that attempted gapping in prelim test: 846144 Number of HSP's gapped (non-prelim): 33672 length of query: 857 length of database: 1,040,396,356 effective HSP length: 138 effective length of query: 719 effective length of database: 615,706,324 effective search space: 442692846956 effective search space used: 442692846956 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 97 (42.1 bits)