50 d1in4a2 Probab=99.78   E-value=8.7e-16  Score=119.41  Aligned_columns=194  Identities=18%

Q ss_pred             HCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEHHHCCCCCHHHHHC
Q ss_conf             30478689999999888788614446566661899857983058999999999734888865885512304410135530
Q batch____       568 HRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLV  647 (857)
Q Consensus       568 ~~~~~q~~a~~~i~~~~~~~~~~~~~~~~p~~~~Ll~Gp~G~GKT~la~aLA~~~~~~~~~liri~~se~~~~~~~~~~~  647 (857)
                      ..++||+++++.+...+...+..    .+++.++||+||||||||++|+++|+.+   +.+++.++.+....        
T Consensus         9 ~~iiG~~~~~~~l~~~i~~~~~~----~~~~~~iLl~GppG~GKT~la~~ia~~l---~~~~~~~~~~~~~~--------   73 (223)
T d1in4a2           9 DEFIGQENVKKKLSLALEAAKMR----GEVLDHVLLAGPPGLGKTTLAHIIASEL---QTNIHVTSGPVLVK--------   73 (223)
T ss_dssp             GGCCSCHHHHHHHHHHHHHHHHH----TCCCCCEEEESSTTSSHHHHHHHHHHHH---TCCEEEEETTTCCS--------
T ss_pred             HHHCCCHHHHHHHHHHHHHHHHC----CCCCCEEEEECCCCCCHHHHHHHHHHHH---CCCEEEEEECCEEE--------
T ss_conf             78036099999999999998736----8757738997589978647999999984---89879984100011--------


Q ss_pred             CCCCCCCCHHHHHHHHHHHHCCCCCEEEEECHHHCCHHHHHHHHHHHHCCEEECCCCCCCCCCCEEEEEECCCCHHHHHH
Q ss_conf             46664310011126899996089988999330566989999999996237056158832045676999823886156554
Q batch____       648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE  727 (857)
Q Consensus       648 g~~~g~~~~~~~~~l~~~~~~~~~~vi~lDei~~~~~~v~~~l~~~l~~g~~~d~~g~~~~~~~~iii~tsn~~~~~~~~  727 (857)
                                ..-.........++.++++||++......++.++..+++        .......+.+|++++.       
T Consensus        74 ----------~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~l~~--------~~~~~~~~~~i~~~~~-------  128 (223)
T d1in4a2          74 ----------QGDMAAILTSLERGDVLFIDEIHRLNKAVEELLYSAIED--------FQIDIQPFTLVGATTR-------  128 (223)
T ss_dssp             ----------HHHHHHHHHHCCTTCEEEEETGGGCCHHHHHHHHHHHHT--------SCCCCCCCEEEEEESC-------
T ss_pred             ----------ECCCHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHC--------CCCCCCCEEEEEECCC-------
T ss_conf             ----------000012355530355011000002488899999999840--------1002278069996068-------


Q ss_pred             HHCCCCHHHHHHHHHHHHHHHCCHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHCC
Q ss_conf             20123201235777898875089578600681998389998999999999999999998844996899889999999626
Q batch____       728 RFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENG  807 (857)
Q Consensus       728 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~i~f~~l~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~  807 (857)
                                        .....+.+..|+...+.|.+++.+++..|++..+..         ..+.++++++.+|++.+
T Consensus       129 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~---------~~~~~~~~~l~~i~~~~  181 (223)
T d1in4a2         129 ------------------SGLLSSPLRSRFGIILELDFYTVKELKEIIKRAASL---------MDVEIEDAAAEMIAKRS  181 (223)
T ss_dssp             ------------------GGGSCHHHHTTCSEEEECCCCCHHHHHHHHHHHHHH---------TTCCBCHHHHHHHHHTS
T ss_pred             ------------------CCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH---------CCCCCCHHHHHHHHHHC
T ss_conf             ------------------532340233210000224699989999999999986---------28998768999999971


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             998778337999999999999999
Q batch____       808 YDPVYGARPLKRAIQQQIENPLAQ  831 (857)
Q Consensus       808 ~~~~~g~r~l~~~i~~~i~~~l~~  831 (857)
                      -   ..+|...+.++.........
T Consensus       182 ~---g~~R~~~~~l~~~~~~a~~~  202 (223)
T d1in4a2         182 R---GTPRIAIRLTKRVRDMLTVV  202 (223)
T ss_dssp             T---TCHHHHHHHHHHHHHHHHHH
T ss_pred             C---CCHHHHHHHHHHHHHHHHHH
T ss_conf             9---99899999999999999970


