65 d1w5sa2 Probab=99.68   E-value=5.3e-15  Score=114.35  Aligned_columns=237  Identities=14%

Q ss_pred             HCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH------CCCCCCEEEEEHHHCCCCC
Q ss_conf             3047868999999988878861444656666189985798305899999999973------4888865885512304410
Q batch____       568 HRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFM------FDSDEAMVRIDMSEFMEKH  641 (857)
Q Consensus       568 ~~~~~q~~a~~~i~~~~~~~~~~~~~~~~p~~~~Ll~Gp~G~GKT~la~aLA~~~------~~~~~~liri~~se~~~~~  641 (857)
                      +.++|++..++.+...+.....+...+..+..+++|+||||||||++++++++.+      ......++.+++++.....
T Consensus        16 ~~~~gR~~ei~~l~~~l~~~~~~~~~~~~~~~~ill~G~pGtGKT~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   95 (287)
T d1w5sa2          16 PELRVRRGEAEALARIYLNRLLSGAGLSDVNMIYGSIGRVGIGKTTLAKFTVKRVSEAAAKEGLTVKQAYVNAFNAPNLY   95 (287)
T ss_dssp             SSCSSSCHHHHHHHHHHHHHHHTSSCBCCEEEEEECTTCCSSSHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCSHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHH
T ss_conf             65768389999999999999856876445733899976999838999999999974201234478149984045630034


Q ss_pred             HHHHHCCCCCCCCCHHHHHHHHHHHHC--------CCCCEEEEECHHHC------CHHHHHHHHHHHHCCEEECCCCCCC
Q ss_conf             135530466643100111268999960--------89988999330566------9899999999962370561588320
Q batch____       642 SVSRLVGAPPGYVGYEEGGYLTEAVRR--------RPYSVILLDEVEKA------HPDVFNILLQVLDDGRLTDGQGRTV  707 (857)
Q Consensus       642 ~~~~~~g~~~g~~~~~~~~~l~~~~~~--------~~~~vi~lDei~~~------~~~v~~~l~~~l~~g~~~d~~g~~~  707 (857)
                      .....+....+......+......++.        ....++++||+|.+      ...+...+++.+      +......
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iDe~d~l~~~~~~~~~~~~~l~~~~------~~~~~~~  169 (287)
T d1w5sa2          96 TILSLIVRQTGYPIQVRGAPALDILKALVDNLYVENHYLLVILDEFQSMLSSPRIAAEDLYTLLRVH------EEIPSRD  169 (287)
T ss_dssp             HHHHHHHHHHTCCCCCTTCCHHHHHHHHHHHHHHHTCEEEEEEESTHHHHSCTTSCHHHHHHHHTHH------HHSCCTT
T ss_pred             HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCCCCCHHHHHHHHHHHH------HCCCCCC
T ss_conf             5566654310134555677689988999998651168861556420110455531479999999998------4057533


Q ss_pred             CCCCEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             45676999823886156554201232012357778988750895786006819983899989999999999999999988
Q batch____       708 DFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLE  787 (857)
Q Consensus       708 ~~~~~iii~tsn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~i~f~~l~~~~~~~i~~~~l~~~~~~~~  787 (857)
                      ...++++++.+|                   ............+....|+...+.|+|++.+++.+|++..+..      
T Consensus       170 ~~~~~~~i~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~~~il~~~~~~------  224 (287)
T d1w5sa2         170 GVNRIGFLLVAS-------------------DVRALSYMREKIPQVESQIGFKLHLPAYKSRELYTILEQRAEL------  224 (287)
T ss_dssp             SCCBEEEEEEEE-------------------ETHHHHHHHHHCHHHHTTCSCEEECCCCCHHHHHHHHHHHHHH------
T ss_pred             CCCCEEEEECCC-------------------CHHHHHHHHHHCCCHHHCCCEEEEEECCCHHHHHHHHHHHHHH------
T ss_conf             668889996168-------------------8889888532000012117448998129989999999987651------


Q ss_pred             HCCCEEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             44996899889999999626998778337999999999999999996065
Q batch____       788 ERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGE  837 (857)
Q Consensus       788 ~~~~~~~~~~~~~~~l~~~~~~~~~g~r~l~~~i~~~i~~~l~~~~~~~~  837 (857)
                       ......+++++++++++. +....|.++.-|...+.+.........++.
T Consensus       225 -~~~~~~~~~~~~~~i~~~-~~~~~~~~g~~R~a~~ll~~A~~~A~~~g~  272 (287)
T d1w5sa2         225 -GLRDTVWEPRHLELISDV-YGEDKGGDGSARRAIVALKMACEMAEAMGR  272 (287)
T ss_dssp             -HBCTTSCCHHHHHHHHHH-HCGGGTSCCCHHHHHHHHHHHHHHHHHTTC
T ss_pred             -CCCCCCCCHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHCCC
T ss_conf             -047777898999999999-853158999989999999999999996489