26 c3pfiB_ Probab=99.88   E-value=1.1e-19  Score=144.47  Aligned_columns=185  Identities=17%

Q ss_pred             HCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEHHHCCCCCHHHHHC
Q ss_conf             30478689999999888788614446566661899857983058999999999734888865885512304410135530
Q batch____       568 HRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLV  647 (857)
Q Consensus       568 ~~~~~q~~a~~~i~~~~~~~~~~~~~~~~p~~~~Ll~Gp~G~GKT~la~aLA~~~~~~~~~liri~~se~~~~~~~~~~~  647 (857)
                      ..++||++++..+...+...+.    +.+|+.++||+||||||||++|+++|+.+   +.+++.++++.+.....+...+
T Consensus         4 ~d~iG~e~~~~~l~~~i~~~~~----~~~~~~~iLl~GppGtGKT~la~~ia~~~---~~~~~~~~~~~~~~~~~i~~~~   76 (283)
T c3pfiB_           4 DGYIGQESIKKNLNVFIAAAKK----RNECLDHILFSGPAGLGKTTLANIISYEX---SANIKTTAAPXIEKSGDLAAIL   76 (283)
T ss_dssp             TTCCSCHHHHHHHHHHHHHHHH----TTCCCCCEEEESSTTSSHHHHHHHHHHHT---TCCEEEEEGGGCCSSHHHHHHH
T ss_pred             HHHCCHHHHHHHHHHHHHHHHH----CCCCCCCEEEECCCCCCHHHHHHHHHHHC---CCCEEEEECHHHHHHHHHHHHH
T ss_conf             6813819999999999999863----37888837997499998899999999960---9979999700002289999988


Q ss_pred             CCCCCCCCHHHHHHHHHHHHCCCCCEEEEECHHHCCHHHHHHHHHHHHCCEEECCCCCCCCCCCEEEEEECCCCHHHHHH
Q ss_conf             46664310011126899996089988999330566989999999996237056158832045676999823886156554
Q batch____       648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE  727 (857)
Q Consensus       648 g~~~g~~~~~~~~~l~~~~~~~~~~vi~lDei~~~~~~v~~~l~~~l~~g~~~d~~g~~~~~~~~iii~tsn~~~~~~~~  727 (857)
                                        .....++|+||||||.+++.+++.|+.++++            ..+.++++++|.       
T Consensus        77 ------------------~~~~~~~il~lDEi~~l~~~~~~~l~~~~e~------------~~~~~~i~~t~~-------  119 (283)
T c3pfiB_          77 ------------------TNLSEGDILFIDEIHRLSPAIEEVLYPAXED------------YPKFTLIGATTR-------  119 (283)
T ss_dssp             ------------------HTCCTTCEEEEESGGGCCHHHHHHHHHHHHT------------CCCCEEEEEESC-------
T ss_pred             ------------------HHCCCCCEEEEECHHHCCHHHHHHHHHHHHC------------CCCEEEEEECCC-------
T ss_conf             ------------------7226787899805567599999999997401------------366068421158-------


Q ss_pred             HHCCCCHHHHHHHHHHHHHHHCCHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHCC
Q ss_conf             20123201235777898875089578600681998389998999999999999999998844996899889999999626
Q batch____       728 RFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENG  807 (857)
Q Consensus       728 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~i~f~~l~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~  807 (857)
                                        .....+.+.+|++..+.|.+++.+++..+++..+..         ..+.++++++++|++.+
T Consensus       120 ------------------~~~~~~~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~---------~~~~~~~~~~~~ia~~~  172 (283)
T c3pfiB_         120 ------------------AGXLSNPLRDRFGXQFRLEFYKDSELALILQKAALK---------LNKTCEEKAALEIAKRS  172 (283)
T ss_dssp             ------------------GGGSCHHHHTTCSEEEECCCCCHHHHHHHHHHHHHH---------TTCEECHHHHHHHHHHT
T ss_pred             ------------------HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH---------CCCCCCHHHHHHHHHHC
T ss_conf             ------------------444110001100222103568888999999999998---------38997579999999974


Q ss_pred             CCCCCCCHHHHHHHHHHHH
Q ss_conf             9987783379999999999
Q batch____       808 YDPVYGARPLKRAIQQQIE  826 (857)
Q Consensus       808 ~~~~~g~r~l~~~i~~~i~  826 (857)
                      .   ..+|...+.++....
T Consensus       173 ~---g~~r~~~~~l~~~~~  188 (283)
T c3pfiB_         173 R---STPRIALRLLKRVRD  188 (283)
T ss_dssp             T---TCHHHHHHHHHHHHH
T ss_pred             C---CCHHHHHHHHHHHHH
T ss_conf             9---998999999999999