124 c3dm5A_ Probab=98.14   E-value=0.00014  Score=47.05  Aligned_columns=143  Identities=12%

Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEHHHCCCCCHHH----------
Q ss_conf             9999999888788614446566661899857983058999999999734888865885512304410135----------
Q batch____       575 EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVS----------  644 (857)
Q Consensus       575 ~a~~~i~~~~~~~~~~~~~~~~p~~~~Ll~Gp~G~GKT~la~aLA~~~~~~~~~liri~~se~~~~~~~~----------  644 (857)
                      .++......+.............+..++|+||+|+|||+.+.-||..+...+.+..-+..--|.-.....          
T Consensus        77 ~~v~~eL~~~l~~~~~~~~~~~~p~vI~~vG~~G~GKTTT~aKLA~~~~~~g~kv~li~aDt~R~aA~eQL~~~a~~~~v  156 (416)
T c3dm5A_          77 KIVYEELTKFLGTEAKPIEIKEKPTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPGAYHQLRQLLDRYHI  156 (416)
T ss_dssp             HHHHHHHHHHTTSSCCCCCCCSSSEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSSTHHHHHHHHHHGGGTC
T ss_pred             HHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCC
T ss_conf             99999999861776433334689649999705887734689999999995699189996188670169999999886099


Q ss_pred             HHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECHH--HCCHHHHHHHHHHHHCCEEECCCCCCCCCCCEEEEEECCCCH
Q ss_conf             530466643100111268999960899889993305--669899999999962370561588320456769998238861
Q batch____       645 RLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVE--KAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGS  722 (857)
Q Consensus       645 ~~~g~~~g~~~~~~~~~l~~~~~~~~~~vi~lDei~--~~~~~v~~~l~~~l~~g~~~d~~g~~~~~~~~iii~tsn~~~  722 (857)
                      .+++...+.--......-.+.++...+.+|++|-..  ..+....+-|.++.          ..+.+..+++++-+..|.
T Consensus       157 p~~~~~~~~d~~~i~~~ai~~~~~~~~DvIlIDTaGR~~~d~~lm~EL~~i~----------~~~~p~~vllV~dA~~gq  226 (416)
T c3dm5A_         157 EVFGNPQEKDAIKLAKEGVDYFKSKGVDIIIVDTAGRHKEDKALIEEMKQIS----------NVIHPHEVILVIDGTIGQ  226 (416)
T ss_dssp             EEECCTTCCCHHHHHHHHHHHHHHTTCSEEEEECCCCSSCCHHHHHHHHHHH----------HHHCCSEEEEEEEGGGGG
T ss_pred             CEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHH----------HHCCCCEEEEEECCCCCH
T ss_conf             1585488578899999999999967998999818888799889999999998----------414842199982267878


Q ss_pred             HHHHH
Q ss_conf             56554
Q batch____       723 DLIQE  727 (857)
Q Consensus       723 ~~~~~  727 (857)
                      +....
T Consensus       227 ~a~~~  231 (416)
T c3dm5A_         227 QAYNQ  231 (416)
T ss_dssp             GHHHH
T ss_pred             HHHHH
T ss_conf             89999