66 c1sxjD_ Probab=99.66   E-value=1.9e-15  Score=117.18  Aligned_columns=167  Identities=20%

Q ss_pred             HCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH---CCCCCCEEEEEHHHCCCCCHHH
Q ss_conf             3047868999999988878861444656666189985798305899999999973---4888865885512304410135
Q batch____       568 HRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFM---FDSDEAMVRIDMSEFMEKHSVS  644 (857)
Q Consensus       568 ~~~~~q~~a~~~i~~~~~~~~~~~~~~~~p~~~~Ll~Gp~G~GKT~la~aLA~~~---~~~~~~liri~~se~~~~~~~~  644 (857)
                      +.++||++++..+...+.         .+...++||+||||||||++|+++|+.+   +......+..++..+...+...
T Consensus        12 ~eiiG~e~~~~~l~~~i~---------~~~~~~~Ll~Gp~G~GKT~la~~ia~~l~~~~~~~~~~~~~~~~~~~~~~~~~   82 (328)
T c1sxjD_          12 DEVTAQDHAVTVLKKTLK---------SANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVR   82 (328)
T ss_dssp             TTCCSCCTTHHHHHHHTT---------CTTCCCEEEECSTTSSHHHHHHHHHHHHHHHHHHTTSEEEECSSSCCCHHHHT
T ss_pred             HHHCCCHHHHHHHHHHHH---------CCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHH
T ss_conf             782295899999999997---------49997699977988898999999999960888777762332010000023568


Q ss_pred             HHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECHHHCCHHHHHHHHHHHHCCEEECCCCCCCCCCCEEEEEECCCCHHH
Q ss_conf             53046664310011126899996089988999330566989999999996237056158832045676999823886156
Q batch____       645 RLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDL  724 (857)
Q Consensus       645 ~~~g~~~g~~~~~~~~~l~~~~~~~~~~vi~lDei~~~~~~v~~~l~~~l~~g~~~d~~g~~~~~~~~iii~tsn~~~~~  724 (857)
                      ..++.............+......+++.|+++||+++++...++.++..+++           ...+++||+++|.    
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iiiide~~~~~~~~~~~ll~~~~~-----------~~~~~~~i~~~~~----  147 (328)
T c1sxjD_          83 EKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMET-----------YSGVTRFCLICNY----  147 (328)
T ss_dssp             THHHHHHHSCCCCCCTTHHHHSCCCSCEEEEETTGGGSCHHHHHHHHHHHHH-----------TTTTEEEEEEESC----
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHC-----------CCCCEEEEEECCC----
T ss_conf             9876421366888889876432206861899837432567999775322210-----------7895499994288----


Q ss_pred             HHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf             55420123201235777898875089578600681998389998999999999999
Q batch____       725 IQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLK  780 (857)
Q Consensus       725 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~i~f~~l~~~~~~~i~~~~l~  780 (857)
                                           .....+.+..|. ..+.|..++..++..+......
T Consensus       148 ---------------------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  181 (328)
T c1sxjD_         148 ---------------------VTRIIDPLASQC-SKFRFKALDASNAIDRLRFISE  181 (328)
T ss_dssp             ---------------------GGGSCHHHHHHS-EEEECCCCCHHHHHHHHHHHHH
T ss_pred             ---------------------HHHHHHHHHHHH-HHHHHCCCCHHHHHHHHHHHHH
T ss_conf             ---------------------023245555442-3344224898999999999986