34 c1nsfA_ Probab=99.83   E-value=2.5e-19  Score=142.28  Aligned_columns=205  Identities=19%

Q ss_pred             HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCC-CCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEHHHCCC
Q ss_conf             17988643047868999999988878861444656-66618998579830589999999997348888658855123044
Q batch____       561 RMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPN-RPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFME  639 (857)
Q Consensus       561 ~l~~~L~~~~~~q~~a~~~i~~~~~~~~~~~~~~~-~p~~~~Ll~Gp~G~GKT~la~aLA~~~~~~~~~liri~~se~~~  639 (857)
                      .+...+...++++...+..+.+.+........... +|+.++||+||||||||++|++||+.+   +.+++++|+++...
T Consensus        10 ~~~~~~~~~ii~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~iLL~GppGtGKT~la~~ia~~~---~~~~i~i~~~~~~~   86 (247)
T c1nsfA_          10 DYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEES---NFPFIKICSPDKMI   86 (247)
T ss_dssp             CTTTTCTTCCCCCSHHHHHHHHHHHHHHHHHHHCSSCSEEEEEEECSTTSSHHHHHHHHHHHH---CCSEEEEECGGGST
T ss_pred             HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHC---CCCEEEEECHHHHC
T ss_conf             999875278888777899999999999999840488887617997288631899999999971---99899984567710


Q ss_pred             CCHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECHH----------HCCHHHHHHHHHHHHCCEEECCCCCCCCC
Q ss_conf             10135530466643100111268999960899889993305----------66989999999996237056158832045
Q batch____       640 KHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVE----------KAHPDVFNILLQVLDDGRLTDGQGRTVDF  709 (857)
Q Consensus       640 ~~~~~~~~g~~~g~~~~~~~~~l~~~~~~~~~~vi~lDei~----------~~~~~v~~~l~~~l~~g~~~d~~g~~~~~  709 (857)
                      ....+...+..         ..+++.+++++++||||||||          .....+.+.++..++.        .....
T Consensus        87 ~~~~~~~~~~~---------~~~f~~a~~~~p~ii~lDEid~l~~~~~~~~~~~~~~~~~l~~~~~~--------~~~~~  149 (247)
T c1nsfA_          87 GFSETAKCQAM---------KKIFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKK--------APPQG  149 (247)
T ss_dssp             TCCHHHHHHHH---------HHHHHHHHTSSEEEEEECCHHHHTTCBTTTTBCCHHHHHHHHHHTTC--------CCSTT
T ss_pred             CCCHHHHHHHH---------HHHHHHHHHCCCCEEEECHHHHHHHCCCCCHHHHHHHHHHHHHHHCC--------CCCCC
T ss_conf             22001268899---------99999998319978981016772101664025789999999985115--------67688


Q ss_pred             CCEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             67699982388615655420123201235777898875089578600681998389998999999999999999998844
Q batch____       710 RNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEER  789 (857)
Q Consensus       710 ~~~iii~tsn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~i~f~~l~~~~~~~i~~~~l~~~~~~~~~~  789 (857)
                      .+++||+|+|                 .+..+.+..       +.+||+..|++++++..+...++......        
T Consensus       150 ~~v~vi~ttn-----------------~~~~l~~~~-------l~~rf~~~i~~p~~~~~~~i~~~l~~~~~--------  197 (247)
T c1nsfA_         150 RKLLIIGTTS-----------------RKDVLQEME-------MLNAFSTTIHVPNIATGEQLLEALELLGN--------  197 (247)
T ss_dssp             CEEEEEEEES-----------------CHHHHHHTT-------GGGTSSEEEECCCEEEHHHHHHHHHHHTC--------
T ss_pred             CCEEEECCCC-----------------CHHHHHHHH-------HCCCCCEEEEECCCCHHHHHHHHHHHHCC--------
T ss_conf             6178841447-----------------777622025-------31733128860797654689999996137--------


Q ss_pred             CCEEEECHHHHHHHHH--CCCCCCCCCHHHHHHHH
Q ss_conf             9968998899999996--26998778337999999
Q batch____       790 GYEIHISDEALKLLSE--NGYDPVYGARPLKRAIQ  822 (857)
Q Consensus       790 ~~~~~~~~~~~~~l~~--~~~~~~~g~r~l~~~i~  822 (857)
                           +.+..+..+++  .++....+.|.+..+++
T Consensus       198 -----~~~~~~~~ia~~~~~~~~~~~ir~l~~~~e  227 (247)
T c1nsfA_         198 -----FKDKERTTIAQQVKGKKVWIGIKKLLMLIE  227 (247)
T ss_dssp             -----SCHHHHHHHHHHHTTSEEEECHHHHHHHHH
T ss_pred             -----CCHHHHHHHHHHHCCCCCCCCHHHHHHHHH
T ss_conf             -----984569999999629889999899999999