15/01/2012 06:20:30 : INFO  : Run start: Sun Jan 15 06:20:29 GMT 2012
15/01/2012 06:20:37 : INFO  : Initialised job
15/01/2012 06:20:39 : INFO  : Renaming log file 'phyre2_20120115_062028.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/ea078c465f12e0ec/phyre_20120115_062028.log'
15/01/2012 06:20:41 : INFO  : Initialised job:
Sequence
>batch____
MIKHLVAPLVFTSLILTGCQSPQGKFTPEQVAAMQSYGFTESAGDWSLGLSDAILFAKND
YKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNYGEDSYNEGLSLKRANVVADAWAMGG
QIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP

15/01/2012 06:20:43 : INFO  : Checked sequence
15/01/2012 06:20:47 : INFO  : Finding homologues with PSI-BLAST
15/01/2012 06:20:49 : INFO  : PSI-BLAST 3 iterations
15/01/2012 06:22:06 : INFO  : PSI-BLAST 5 iterations
15/01/2012 06:23:53 : INFO  : Finished PSI-BLAST
15/01/2012 06:23:57 : INFO  : Running Buildali to generate a3m file
15/01/2012 06:39:23 : INFO  : Converting to HMM
15/01/2012 06:39:26 : INFO  : Calibrating HMM
15/01/2012 06:39:40 : INFO  : Searching HMM database
15/01/2012 06:42:50 : INFO  : Finished buildali
15/01/2012 06:42:52 : INFO  : Predicting secondary structure
15/01/2012 06:43:03 : INFO  : Predicted secondary structure (PSI-Pred)
15/01/2012 06:43:05 : INFO  : Predicting Disordered regions
15/01/2012 06:43:10 : INFO  : Predicted Disorder (Disopred)
15/01/2012 06:43:14 : INFO  : Running memsat_svm check
15/01/2012 06:47:37 : INFO  : Running memsat_svm full
15/01/2012 06:54:35 : INFO  : Predicted Transmembrane (memsat_svm) ID 'ea078c465f12e0ec'
15/01/2012 06:54:37 : INFO  : Initialising fold library search
15/01/2012 06:54:41 : INFO  : Initialised search input
15/01/2012 06:54:45 : INFO  : Building Ensemble models
15/01/2012 06:54:50 : INFO  : Building hh.c2l26A_.model.1.pdb
15/01/2012 06:55:12 : INFO  : Building hh.c2kgwA_.model.2.pdb
15/01/2012 06:55:30 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/ea078c465f12e0ec/hh.c2kgwA_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/ea078c465f12e0ec/c2kgwA_.2.pdb
15/01/2012 06:55:36 : INFO  : Building hh.c3td4D_.model.3.pdb
15/01/2012 06:55:52 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/ea078c465f12e0ec/hh.c3td4D_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/ea078c465f12e0ec/c3td4D_.3.pdb
15/01/2012 06:55:57 : INFO  : Building hh.c2k1sA_.model.4.pdb
15/01/2012 06:56:13 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/ea078c465f12e0ec/hh.c2k1sA_.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/ea078c465f12e0ec/c2k1sA_.5.pdb
15/01/2012 06:56:19 : INFO  : Building hh.c1r1mA_.model.5.pdb
15/01/2012 06:56:38 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/ea078c465f12e0ec/hh.c1r1mA_.model.5.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/ea078c465f12e0ec/c1r1mA_.8.pdb
15/01/2012 06:56:43 : INFO  : Building hh.d1r1ma_.model.6.pdb
15/01/2012 06:57:00 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/ea078c465f12e0ec/hh.d1r1ma_.model.6.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/ea078c465f12e0ec/d1r1ma_.9.pdb
15/01/2012 06:57:06 : INFO  : Building c2l26A_.1.pdb
15/01/2012 06:57:25 : INFO  : Building c2kgwA_.2.pdb
15/01/2012 06:57:45 : INFO  : Building c3td4D_.3.pdb
15/01/2012 06:58:04 : INFO  : Building d2aizp1.4.pdb
15/01/2012 06:58:22 : INFO  : Building c2k1sA_.5.pdb
15/01/2012 06:58:41 : INFO  : Building c3khnB_.6.pdb
15/01/2012 06:59:01 : INFO  : Building d2hqsc1.7.pdb
15/01/2012 06:59:23 : INFO  : Building c1r1mA_.8.pdb
15/01/2012 06:59:44 : INFO  : Building d1r1ma_.9.pdb
15/01/2012 07:00:03 : INFO  : Building c3cyqM_.10.pdb
15/01/2012 07:00:23 : INFO  : Building c2zvyB_.11.pdb
15/01/2012 07:00:46 : INFO  : Building c3ldtA_.12.pdb
15/01/2012 07:01:06 : INFO  : Building c3oonA_.13.pdb
15/01/2012 07:01:24 : INFO  : Building c2zovA_.14.pdb
15/01/2012 07:01:45 : INFO  : Building c2zf8A_.15.pdb
15/01/2012 07:02:06 : INFO  : Building d1tiba_.16.pdb
15/01/2012 07:02:28 : INFO  : Building d1tiaa_.17.pdb
15/01/2012 07:02:42 : INFO  : Building c3ngmB_.18.pdb
15/01/2012 07:03:03 : INFO  : Building c3o0dF_.19.pdb
15/01/2012 07:03:21 : INFO  : Building d1uwca_.20.pdb
15/01/2012 07:05:49 : INFO  : Finished HH model building
15/01/2012 07:05:51 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
15/01/2012 07:07:07 : INFO  : html domain output complete ID 'ea078c465f12e0ec'
15/01/2012 07:27:08 : INFO  : Run end  : Sun Jan 15 07:27:06 GMT 2012
