Phyre 2 alignment of P07021 with c2ckcA_

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Job Description | P07021
Confidence | 11.73% | Date | Thu Jan 5 11:00:04 GMT 2012
Rank | 45 | Aligned Residues | 42
% Identity | 10% | Template | c2ckcA_
PDB info | PDB header:hydrolase | Chain: A: PDB Molecule:chromodomain-helicase-dna-binding protein 7; | PDBTitle: solution structures of the brk domains of the human chromo2 helicase domain 7 and 8, reveals structural similarity3 with gyf domain suggesting a role in protein interaction
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 51 | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | S | D | A | I | L | F | A | K | N | D | Y | K | L | L | P | E | S | Q | Q | Q | I | Q | T | M | A | A | K | L | A | S | T | G | L | T | H | A | R | M | D | G | H | T
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | R | I | P | V | I | N | L | E | D | G | T | R | L | V | G | E | D | A | P | K | N | K | D | L | V | E | W | L | K | L | H | P | T | Y | T | V | D | M | P | S | Y | V
Template Known Secondary structure |  | B |  |  |  |  |  | T | T | T | T |  |  |  |  | T | T | S | S |  | B |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  | S |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 2568 | . | 2570 | . | . | . | . | . | . | . | . | . | 2580 | . | . | . | . | . | . | . | . | . | 2590 | . | . | . | . | . | . | . | . | . | 2600 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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