Phyre 2 Results for P07021

Email | l.a.kelley@imperial.ac.uk
Description | P07021
Date | Thu Jan 5 11:00:04 GMT 2012
Unique Job ID | ea078c465f12e0ec

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c2l26A_ |
|  | 100.0 | 36 | PDB header:membrane protein Chain: A: PDB Molecule:uncharacterized protein rv0899/mt0922; PDBTitle: rv0899 from mycobacterium tuberculosis contains two separated domains
2 | c2kgwA_ |
|  | 100.0 | 31 | PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein a; PDBTitle: solution structure of the carboxy-terminal domain of ompatb, a pore2 forming protein from mycobacterium tuberculosis
3 | c3td4D_ |
|  | 100.0 | 38 | PDB header:membrane protein,peptide binding protein Chain: D: PDB Molecule:outer membrane protein omp38; PDBTitle: crystal structure of ompa-like domain from acinetobacter baumannii in2 complex with diaminopimelate
4 | d2aizp1 |
|  | 100.0 | 23 | Fold:Bacillus chorismate mutase-like Superfamily:OmpA-like Family:OmpA-like
5 | c2k1sA_ |
|  | 100.0 | 32 | PDB header:lipoprotein Chain: A: PDB Molecule:inner membrane lipoprotein yiad; PDBTitle: solution nmr structure of the folded c-terminal fragment of yiad from2 escherichia coli. northeast structural genomics consortium target3 er553.
6 | c3khnB_ |
|  | 100.0 | 26 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:motb protein, putative; PDBTitle: crystal structure of putative motb like protein dvu_22282 from desulfovibrio vulgaris.
7 | d2hqsc1 |
|  | 100.0 | 24 | Fold:Bacillus chorismate mutase-like Superfamily:OmpA-like Family:OmpA-like
8 | c1r1mA_ |
|  | 100.0 | 36 | PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein class 4; PDBTitle: structure of the ompa-like domain of rmpm from neisseria2 meningitidis
9 | d1r1ma_ |
|  | 100.0 | 36 | Fold:Bacillus chorismate mutase-like Superfamily:OmpA-like Family:OmpA-like
10 | c3cyqM_ |
|  | 100.0 | 22 | PDB header:membrane protein Chain: M: PDB Molecule:chemotaxis protein motb; PDBTitle: the crystal structure of the complex of the c-terminal domain of2 helicobacter pylori motb (residues 125-256) with n-acetylmuramic acid
11 | c2zvyB_ |
|  | 100.0 | 19 | PDB header:membrane protein Chain: B: PDB Molecule:chemotaxis protein motb; PDBTitle: structure of the periplasmic domain of motb from salmonella2 (crystal form ii)
12 | c3ldtA_ |
|  | 100.0 | 21 | PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein, ompa family protein; PDBTitle: crystal structure of an outer membrane protein(ompa)from2 legionella pneumophila
13 | c3oonA_ |
|  | 99.9 | 25 | PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein (tpn50); PDBTitle: the structure of an outer membrance protein from borrelia burgdorferi2 b31
14 | c2zovA_ |
|  | 99.9 | 23 | PDB header:membrane protein Chain: A: PDB Molecule:chemotaxis protein motb; PDBTitle: structure of the periplasmic domain of motb from salmonella2 (crystal form i)
15 | c2zf8A_ |
|  | 99.8 | 18 | PDB header:structural protein Chain: A: PDB Molecule:component of sodium-driven polar flagellar motor; PDBTitle: crystal structure of moty
16 | d1tiba_ |
|  | 56.0 | 17 | Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Fungal lipases
17 | d1tiaa_ |
|  | 49.5 | 19 | Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Fungal lipases
18 | c3ngmB_ |
|  | 45.5 | 23 | PDB header:hydrolase Chain: B: PDB Molecule:extracellular lipase; PDBTitle: crystal structure of lipase from gibberella zeae
19 | c3o0dF_ |
|  | 41.7 | 17 | PDB header:hydrolase Chain: F: PDB Molecule:triacylglycerol lipase; PDBTitle: crystal structure of lip2 lipase from yarrowia lipolytica at 1.7 a2 resolution
20 | d1uwca_ |
|  | 31.8 | 17 | Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Fungal lipases
21 | c3g7nA_ |
| not modelled | 31.0 | 22 | PDB header:hydrolase Chain: A: PDB Molecule:lipase; PDBTitle: crystal structure of a triacylglycerol lipase from2 penicillium expansum at 1.3
22 | d1qy7a_ |
| not modelled | 29.3 | 11 | Fold:Ferredoxin-like Superfamily:GlnB-like Family:Prokaryotic signal transducing protein
23 | c3ds8A_ |
| not modelled | 24.8 | 18 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:lin2722 protein; PDBTitle: the crysatl structure of the gene lin2722 products from listeria2 innocua
24 | d1uzhc1 |
| not modelled | 24.2 | 12 | Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit
25 | d1rbli_ |
| not modelled | 23.9 | 19 | Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit
26 | c1ir6A_ |
| not modelled | 22.3 | 17 | PDB header:hydrolase Chain: A: PDB Molecule:exonuclease recj; PDBTitle: crystal structure of exonuclease recj bound to manganese
27 | d1ir6a_ |
| not modelled | 22.3 | 17 | Fold:DHH phosphoesterases Superfamily:DHH phosphoesterases Family:Exonuclease RecJ
28 | c2rd5D_ |
| not modelled | 22.2 | 17 | PDB header:protein binding Chain: D: PDB Molecule:pii protein; PDBTitle: structural basis for the regulation of n-acetylglutamate kinase by pii2 in arabidopsis thaliana
29 | d1svdm1 |
| not modelled | 22.0 | 4 | Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit
30 | c2r6hC_ |
| not modelled | 19.4 | 33 | PDB header:oxidoreductase Chain: C: PDB Molecule:nadh:ubiquinone oxidoreductase, na translocating, f PDBTitle: crystal structure of the domain comprising the nad binding and the fad2 binding regions of the nadh:ubiquinone oxidoreductase, na3 translocating, f subunit from porphyromonas gingivalis
31 | d8ruci_ |
| not modelled | 18.9 | 12 | Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit
32 | c2oghA_ |
| not modelled | 18.3 | 13 | PDB header:translation Chain: A: PDB Molecule:eukaryotic translation initiation factor eif-1; PDBTitle: solution structure of yeast eif1
33 | d1ej7s_ |
| not modelled | 18.3 | 12 | Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit
34 | d3tgla_ |
| not modelled | 17.7 | 18 | Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Fungal lipases
35 | d1ir1s_ |
| not modelled | 17.1 | 12 | Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit
36 | d2if1a_ |
| not modelled | 17.0 | 13 | Fold:eIF1-like Superfamily:eIF1-like Family:eIF1-like
37 | d1wdds_ |
| not modelled | 16.8 | 12 | Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit
38 | d1bwvs_ |
| not modelled | 16.6 | 9 | Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit
39 | d1lgya_ |
| not modelled | 16.0 | 16 | Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Fungal lipases
40 | d2v6ai1 |
| not modelled | 14.7 | 12 | Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit
41 | d1bxni_ |
| not modelled | 12.7 | 3 | Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit
42 | d1sxra_ |
| not modelled | 12.7 | 11 | Fold:N-acetylmuramoyl-L-alanine amidase-like Superfamily:N-acetylmuramoyl-L-alanine amidase-like Family:N-acetylmuramoyl-L-alanine amidase-like
43 | c1nauA_ |
| not modelled | 12.7 | 18 | PDB header:hormone/growth factor Chain: A: PDB Molecule:glucagon; PDBTitle: nmr solution structure of the glucagon antagonist [deshis1,2 desphe6, glu9]glucagon amide in the presence of3 perdeuterated dodecylphosphocholine micelles
44 | d2ckca1 |
| not modelled | 11.7 | 10 | Fold:GYF/BRK domain-like Superfamily:BRK domain-like Family:BRK domain-like
45 | c2ckcA_ |
| not modelled | 11.7 | 10 | PDB header:hydrolase Chain: A: PDB Molecule:chromodomain-helicase-dna-binding protein 7; PDBTitle: solution structures of the brk domains of the human chromo2 helicase domain 7 and 8, reveals structural similarity3 with gyf domain suggesting a role in protein interaction
46 | d1gvha3 |
| not modelled | 11.1 | 15 | Fold:Ferredoxin reductase-like, C-terminal NADP-linked domain Superfamily:Ferredoxin reductase-like, C-terminal NADP-linked domain Family:Flavohemoglobin, C-terminal domain
47 | d1gk8i_ |
| not modelled | 11.0 | 10 | Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit
48 | d2piia_ |
| not modelled | 10.7 | 17 | Fold:Ferredoxin-like Superfamily:GlnB-like Family:Prokaryotic signal transducing protein
49 | d1uzdc1 |
| not modelled | 10.3 | 10 | Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit
50 | c1s2jA_ |
| not modelled | 10.2 | 10 | PDB header:hydrolase Chain: A: PDB Molecule:peptidoglycan recognition protein sa cg11709-pa; PDBTitle: crystal structure of the drosophila pattern-recognition2 receptor pgrp-sa
51 | d1d4oa_ |
| not modelled | 9.8 | 19 | Fold:DHS-like NAD/FAD-binding domain Superfamily:DHS-like NAD/FAD-binding domain Family:Transhydrogenase domain III (dIII)
52 | d2v0ea1 |
| not modelled | 8.9 | 8 | Fold:GYF/BRK domain-like Superfamily:BRK domain-like Family:BRK domain-like
53 | c1pt9B_ |
| not modelled | 8.9 | 19 | PDB header:oxidoreductase Chain: B: PDB Molecule:nad(p) transhydrogenase, mitochondrial; PDBTitle: crystal structure analysis of the diii component of transhydrogenase2 with a thio-nicotinamide nucleotide analogue
54 | d1tvca2 |
| not modelled | 8.3 | 11 | Fold:Ferredoxin reductase-like, C-terminal NADP-linked domain Superfamily:Ferredoxin reductase-like, C-terminal NADP-linked domain Family:Aromatic dioxygenase reductase-like
55 | c3b9eA_ |
| not modelled | 8.1 | 9 | PDB header:hydrolase Chain: A: PDB Molecule:chitinase a; PDBTitle: crystal structure of inactive mutant e315m chitinase a from2 vibrio harveyi
56 | c3bzqA_ |
| not modelled | 7.2 | 15 | PDB header:signaling protein/transcription Chain: A: PDB Molecule:nitrogen regulatory protein p-ii; PDBTitle: high resolution crystal structure of nitrogen regulatory protein2 (rv2919c) of mycobacterium tuberculosis
57 | c3rxyA_ |
| not modelled | 6.9 | 25 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:nif3 protein; PDBTitle: crystal structure of nif3 superfamily protein from sphaerobacter2 thermophilus
58 | d2gova1 |
| not modelled | 6.6 | 10 | Fold:Probable bacterial effector-binding domain Superfamily:Probable bacterial effector-binding domain Family:SOUL heme-binding protein
59 | c1gvhA_ |
| not modelled | 6.6 | 14 | PDB header:oxidoreductase Chain: A: PDB Molecule:flavohemoprotein; PDBTitle: the x-ray structure of ferric escherichia coli2 flavohemoglobin reveals an unespected geometry of the3 distal heme pocket
60 | c3devB_ |
| not modelled | 6.5 | 4 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:sh1221; PDBTitle: crystal structure of sh1221 protein from staphylococcus haemolyticus,2 northeast structural genomics consortium target shr87
61 | c3mhyC_ |
| not modelled | 6.2 | 13 | PDB header:signaling protein Chain: C: PDB Molecule:pii-like protein pz; PDBTitle: a new pii protein structure
62 | c2ckaA_ |
| not modelled | 6.0 | 8 | PDB header:hydrolase Chain: A: PDB Molecule:chromodomain-helicase-dna-binding protein 8; PDBTitle: solution structures of the brk domains of the human chromo2 helicase domain 7 and 8, reveals structural similarity3 with gyf domain suggesting a role in protein interaction
63 | d2ckaa1 |
| not modelled | 6.0 | 8 | Fold:GYF/BRK domain-like Superfamily:BRK domain-like Family:BRK domain-like
64 | d1zpda1 |
| not modelled | 6.0 | 13 | Fold:DHS-like NAD/FAD-binding domain Superfamily:DHS-like NAD/FAD-binding domain Family:Pyruvate oxidase and decarboxylase, middle domain
65 | d1e32a3 |
| not modelled | 5.8 | 19 | Fold:Cdc48 domain 2-like Superfamily:Cdc48 domain 2-like Family:Cdc48 domain 2-like
66 | c3dmaA_ |
| not modelled | 5.7 | 11 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:exopolyphosphatase-related protein; PDBTitle: crystal structure of an exopolyphosphatase-related protein2 from bacteroides fragilis. northeast structural genomics3 target bfr192
67 | d1cqxa3 |
| not modelled | 5.7 | 17 | Fold:Ferredoxin reductase-like, C-terminal NADP-linked domain Superfamily:Ferredoxin reductase-like, C-terminal NADP-linked domain Family:Flavohemoglobin, C-terminal domain