220 d1r88a_ Probab=98.26   E-value=0.00015  Score=46.00  Aligned_columns=216  Identities=12%

Q ss_pred             EEEEEEECCCCCEEEEECCCCC--CHHHHHHH---HHHHHC-CCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHH-----
Q ss_conf             1689981599974999964899--88899999---998737-988999568789999786421058888766420-----
Q batch____         3 NIWWQTKGQGNVHLVLLHGWGL--NAEVWRCI---DEELSS-HFTLHLVDLPGFGRSRGFGALSLADMAEAVLQQ-----   71 (256)
Q Consensus         3 ~i~y~~~G~g~p~ivllHG~~~--~~~~~~~~---~~~L~~-~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~-----   71 (256)
                      +|.+...-.+.|+|+|+||.++  +...|...   .+.+.+ ++-|+.++....+....................     
T Consensus        17 ~~~~~v~~p~~p~l~lLHG~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~   96 (267)
T d1r88a_          17 DIPVAFLAGGPHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAYSMYTNWEQDGSKQWDTFLSAELPDWL   96 (267)
T ss_dssp             EEEEEEECCSSSEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCCTTSTTSBCSSCTTCBHHHHHHTHHHHHH
T ss_pred             EEEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf             46899981899799998878999883212332108999832894897267887768987445554445889999899988


Q ss_pred             ------CCCCEEEEEECCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
Q ss_conf             ------46630587651434202344442101245038861877767731012444676656777520002789999864
Q batch____        72 ------APDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLA  145 (256)
Q Consensus        72 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (256)
                            ......+.|.|+||..+...+..++......+..++......................                
T Consensus        97 ~~~~~~~~~~~~i~G~S~GG~~Al~la~~~Pd~f~~~~~~sg~~~~~~~~~~~~~~~~~~~~~~----------------  160 (267)
T d1r88a_          97 AANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYPSNTTTNGAIAAGMQQFGG----------------  160 (267)
T ss_dssp             HHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCTTSHHHHHHHHHHHHHHHC----------------
T ss_pred             HHHCCCCCCCEEEEEECHHHHHHHHHHHHCHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHCCC----------------
T ss_conf             8745998585899997878999999999780002301111434455576652002344431022----------------


Q ss_pred             HHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCC--------------
Q ss_conf             311376554136999999985200002577876654310001211013478632678525887468--------------
Q batch____       146 LQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVP--------------  211 (256)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~--------------  211 (256)
                                          ................................++.+..++.|...+              
T Consensus       161 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (267)
T d1r88a_         161 --------------------VDTNGMWGAPQLGRWKWHDPWVHASLLAQNNTRVWVWSPTNPGASDPAAMIGQAAEAMGN  220 (267)
T ss_dssp             --------------------CCTHHHHCCGGGSTTGGGCTTTTHHHHHHTTCEEEEECCSSCCCSSGGGGTTCHHHHHHH
T ss_pred             --------------------CCCHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHH
T ss_conf             --------------------320100377536888641032224442026823897317876656610001013554432


Q ss_pred             --HHHHHHHHHHCCCCEEEEECCCCC-CHHHHCH-HHHHHHHHHHHH
Q ss_conf             --999999999779979999889975-8657189-999999999985
Q batch____       212 --RKVVPMLDKLWPHSESYIFAKAAH-APFISHP-AEFCHLLVALKQ  254 (256)
Q Consensus       212 --~~~~~~~~~~~~~~~~~~i~~~gH-~~~~e~p-~~~~~~i~~fl~  254 (256)
                        ....+.+...-.+.++.++++++| |..+++- .++...|..+|+
T Consensus       221 ~~~~~~~~~~~~g~~~~~~~~~~G~H~w~~W~~~l~~~~~~l~~~l~  267 (267)
T d1r88a_         221 SRMFYNQYRSVGGHNGHFDFPASGDNGWGSWAPQLGAMSGDIVGAIR  267 (267)
T ss_dssp             HHHHHHHHHHTTCCSEEEECCSSCCSSHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf             38999999983899389999886775737889999999999875609