141 c1a1vA_ Probab=81.66   E-value=1.4  Score=24.48  Aligned_columns=127  Identities=17%

Q ss_pred             HHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHCCCEEEECCCCCCCCCCCC---
Q ss_conf             41004597399997499853089999999997099849999981389874068778645980999266744577789---
Q batch____        22 AQAQDERGIIIVFTGNGKGKTTAAFGTATRAVGHGKKVGVVQFIKGTWPNGERNLLEPHGVEFQVMATGFTWDTQNR---   98 (196)
Q Consensus        22 ~~~~~e~Gli~iytG~GKGKTTAAlG~alRA~G~G~rV~iiQFlKg~~~~gE~~~l~~~g~~~~~~~~g~~~~~~~~---   98 (196)
                      +....+.=...+-.-.|-||||+..-..+.   .|.+|++++=.+---..=...+-+.++........+.......+   
T Consensus         2 ~~~~~~~q~~il~apTGsGKT~~~~~~~~~---~g~~vlvl~P~r~La~~~~~~l~~~~g~~~~~~~~~~~~~~~~~I~v   78 (429)
T c1a1vA_           2 PAVPQSFQVAHLHAPTGSGKSTKVPAAYAA---QGYKVLVLNPSVAATLGFGAYMSKAHGVDPNIRTGVRTITTGSPITY   78 (429)
T ss_dssp             CCCCSSCEEEEEECCTTSCTTTHHHHHHHT---TTCCEEEEESCHHHHHHHHHHHHHHHSCCCEEECSSCEECCCCSEEE
T ss_pred             CCCCCCCCEEEEECCCCCCHHHHHHHHHHH---CCCEEEEECCHHHHHHHHHHHHHHHHCCCHHHHCCCEEEECCCCEEE
T ss_conf             874001976999858988788999999997---79779998463899899999999751845012216476147986899


Q ss_pred             -HHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEE
Q ss_conf             -8999999999999999953689988973345999738985799999999709977579997
Q batch____        99 -ESDTAACREVWQHAKRMLADSSLDMVLLDELTYMVAYDYLPLEEVVQALNERPHQQTVIIT  159 (196)
Q Consensus        99 -~e~~~~~~~~~~~a~~~i~~~~~dlvILDEi~~A~~~gli~~eev~~~L~~rp~~~evVLT  159 (196)
                       ..+        ........-..+++||+||+=..-..+.+-.......+..++...-|.+|
T Consensus        79 ~T~~--------~ll~~~~~l~~~~~VIiDEaH~~~~~~~~~~~~~~~~~~~~~~~~~i~~S  132 (429)
T c1a1vA_          79 STYG--------KFLADGGSGGAYDIIICDECHSTDATSILGIGTVLDQAETAGARLVVLAT  132 (429)
T ss_dssp             EEHH--------HHHHTTCCCCCCSEEEEETTTCCSHHHHHHHHHHHHHTTTTTCSEEEEEE
T ss_pred             ECCC--------HHHCCCCCCCCCCEEEECHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEE
T ss_conf             9711--------87437420267317983045203422212568888763118883799981