50 c2vp8A_ Probab=96.27   E-value=0.092  Score=30.64  Aligned_columns=169  Identities=16%

Q ss_pred             EECCEEECCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCH
Q ss_conf             85227877998579998068998999999998731599899998133068999899999999999852899589996566
Q batch____         5 TVKDLVIGTGAPKIIVSLMAKDIASVKSEALAYREADFDILEWRVDHYADLSNVESVMAAAKILRETMPEKPLLFTFRSA   84 (252)
Q Consensus         5 ~v~~~~~g~~~pkI~v~i~~~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~l~~~~~~l~~~~~~~PiI~T~R~~   84 (252)
                      .+.+..++..+|.|-..|-   -.-....+++....|||++.+=-..    .+.+.+.+.+..+++..++.|+=+     
T Consensus         5 ~~~g~~~~~~r~~imGIlN---dsf~~~~a~~~i~~GAdiIDIG~~s----tE~~rl~~vi~~l~~~~~~~~iSI-----   72 (233)
T c2vp8A_           5 TLCGRPVAGDRALIMAIVN---DAAARDAVHRAVADGADVIDVGDVD----TEITRLVPFIEWLRGAYPDQLISV-----   72 (233)
T ss_dssp             EETTEEECSSSCEEEEEEC---CHHHHHHHHHHHHTTCSEEEECCHH----HHHHHHHHHHHHHHHHSTTCEEEE-----
T ss_pred             CCCCEECCCCCCEEEEEEC---CCCCHHHHHHHHHCCCCEEEECCHH----HHHHHHHHHHHHHHHHCCCCEEEE-----
T ss_conf             4466151589987999974---6311179999998599799987824----669999999999997528986999-----


Q ss_pred             HHCCCCCCCHHHHHHHHHHHHHCCCCCEE-EEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCC------HHHHHHH
Q ss_conf             76785368989999999999854999699-9863486388999999756469889999425889758------8999999
Q batch____        85 KEGGEQAISTEAYIALNRAAIDSGLVDMI-DLELFTGDDQVKETVAYAHAHDVKVVMSNHDFHKTPE------AEEIIAR  157 (252)
Q Consensus        85 ~EGG~~~~~~~~~~~ll~~~~~~~~~d~i-DiEl~~~~~~~~~l~~~~~~~~~~iI~S~H~f~~TP~------~~~l~~~  157 (252)
                               +..+.+..+.+++.| +++| ||--...++...    .+..+++.+|+ -|.-..+.+      .+.+.+.
T Consensus        73 ---------DT~~~~v~eaal~~G-~~iINdisg~~d~~m~~----lva~~~~~vVl-mh~~g~~~~~~~~~~~~~~~~~  137 (233)
T c2vp8A_          73 ---------DTWRAQVAKAACAAG-ADLINDTWGGVDPAMPE----VAAEFGAGLVC-AHTYGTTTRGVVDAVISQVTAA  137 (233)
T ss_dssp             ---------ECSCHHHHHHHHHHT-CCEEEETTSSSSTTHHH----HHHHHTCEEEE-ECCCCSCHHHHHHHHHHHHHHH
T ss_pred             ---------ECCCHHHHHHHHHCC-CCEEEECCCCCCHHHHH----HHHHCCCCEEE-ECCCCCCCCCHHHHHHHHHHHH
T ss_conf             ---------779989999999659-97999377788865899----99852997999-6689898555699999999999


Q ss_pred             HHHHHHCCCCEEEEEEEC-----CCHHHHHHHHHHHHHHHHHCCCCCEEE
Q ss_conf             999997089889999800-----898999999999999996138998999
Q batch____       158 LRKMQSFDADIPKIALMP-----QSTSDVLTLLAATLEMQEQYADRPIIT  202 (252)
Q Consensus       158 ~~~~~~~gaDivKia~~~-----~~~~D~l~ll~~~~~~~~~~~~~P~I~  202 (252)
                      ++.+.+.|-+--+|..-|     .+.++++.+++...+++..  +.|+..
T Consensus       138 ~~~~~~~Gi~~~~IilDPGiGFgk~~~~nl~~l~~~~~l~~l--g~Pil~  185 (233)
T c2vp8A_         138 AERAVAAGVAREKVLIDPAHDFGKNTFHGLLLLRHVADLVMT--GWPVLM  185 (233)
T ss_dssp             HHHHHHTTCCGGGEEEETTTTCCTTSHHHHHHHHTHHHHHTT--SSCBEE
T ss_pred             HHHHHHCCCCHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHC--CCCEEE
T ss_conf             999997599864599916888888988899999989987627--997899