BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (147 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P28905 DNA polymerase III subunit chi n=172 Tax=Gammapr... 303 9e-82 UniRef50_Q1LTH9 DNA polymerase III, chi subunit n=1 Tax=Baumanni... 161 7e-39 UniRef50_P43749 DNA polymerase III subunit chi n=33 Tax=Pasteure... 153 1e-36 UniRef50_B5F9Q5 DNA polymerase III subunit chi n=6 Tax=Gammaprot... 134 7e-31 UniRef50_Q15PX3 DNA polymerase III, chi subunit n=1 Tax=Pseudoal... 133 2e-30 UniRef50_Q7VQT1 DNA polymerase III, chi subunit n=2 Tax=Candidat... 125 3e-28 UniRef50_A4SSA6 DNA polymerase III, chi subunit n=2 Tax=Aeromona... 122 3e-27 UniRef50_Q3II74 DNA polymerase III, chi subunit n=3 Tax=Alteromo... 118 6e-26 UniRef50_Q0HXF4 DNA polymerase III chi subunit, HolC n=9 Tax=She... 116 2e-25 UniRef50_Q488M5 DNA polymerase III, chi subunit n=1 Tax=Colwelli... 116 2e-25 UniRef50_C3NVA1 DNA polymerase III chi subunit n=40 Tax=Vibrio R... 114 1e-24 UniRef50_C4LA52 DNA polymerase III chi subunit HolC n=1 Tax=Tolu... 111 7e-24 UniRef50_A1SRZ0 DNA polymerase III chi subunit, HolC n=2 Tax=Psy... 109 2e-23 UniRef50_A1RHG9 DNA polymerase III chi subunit, HolC n=12 Tax=Sh... 105 4e-22 UniRef50_Q5QY16 DNA polymerase III chi subunit n=2 Tax=Idiomarin... 103 1e-21 UniRef50_B4RWP0 DNA polymerase III chi subunit n=1 Tax=Alteromon... 103 2e-21 UniRef50_Q7MHG2 DNA polymerase III, chi subunit n=15 Tax=Vibrion... 103 2e-21 UniRef50_C7R5R1 DNA polymerase III chi subunit HolC n=1 Tax=Kang... 100 2e-20 UniRef50_UPI0000E0E595 DNA polymerase III subunit chi n=1 Tax=Rh... 91 8e-18 UniRef50_A4VNZ8 DNA polymerase III, chi subunit n=2 Tax=Pseudomo... 80 1e-14 UniRef50_O68823 DNA polymerase III subunit chi n=20 Tax=Pseudomo... 80 2e-14 UniRef50_Q0VSA6 DNA polymerase III, chi subunit n=2 Tax=Alcanivo... 78 7e-14 UniRef50_Q5ZS87 DNA polymerase III, chi subunit n=6 Tax=Legionel... 77 2e-13 UniRef50_Q1N2A3 DNA polymerase III chi subunit, HolC n=1 Tax=Ber... 76 3e-13 UniRef50_C0N7W1 DNA polymerase III, chi subunit superfamily n=1 ... 75 7e-13 UniRef50_Q3JEC9 DNA polymerase III chi subunit, HolC n=2 Tax=Nit... 71 1e-11 UniRef50_A7C6F2 DNA polymerase III chi subunit, HolC n=1 Tax=Beg... 69 4e-11 UniRef50_A4A3Y4 DNA polymerase III chi subunit, HolC n=5 Tax=unc... 68 1e-10 UniRef50_Q2BIS6 DNA polymerase III chi subunit, HolC n=1 Tax=Nep... 66 4e-10 UniRef50_Q3BP99 DNA polymerase III holoenzyme chi subunit n=25 T... 66 4e-10 UniRef50_C5S9R7 DNA polymerase III chi subunit HolC n=1 Tax=Allo... 65 7e-10 UniRef50_B3PDI9 DNA polymerase III, chi subunit n=1 Tax=Cellvibr... 64 2e-09 UniRef50_Q2SKR1 DNA polymerase III, chi subunit n=1 Tax=Hahella ... 63 3e-09 UniRef50_Q1H4U3 DNA polymerase III, chi subunit n=2 Tax=Methylop... 62 4e-09 UniRef50_B8GTX7 DNA polymerase III chi subunit HolC n=1 Tax=Thio... 62 4e-09 UniRef50_B5EKZ3 DNA polymerase III chi subunit HolC n=2 Tax=Acid... 61 9e-09 UniRef50_C6NVB1 DNA polymerase III chi subunit n=1 Tax=Acidithio... 61 9e-09 UniRef50_Q31ET2 DNA polymerase III, chi subunit n=1 Tax=Thiomicr... 61 1e-08 UniRef50_A0LB28 DNA polymerase III, chi subunit n=1 Tax=Magnetoc... 60 2e-08 UniRef50_Q7R6X2 Cytosol aminopeptidase (Fragment) n=3 Tax=cellul... 60 2e-08 UniRef50_A0YCI5 DNA polymerase III subunit chi n=1 Tax=marine ga... 60 3e-08 UniRef50_Q3A4B4 DNA polymerase III, chi subunit n=2 Tax=Desulfur... 59 3e-08 UniRef50_Q21KZ6 DNA polymerase III chi subunit, HolC n=2 Tax=Alt... 59 3e-08 UniRef50_Q1QTE2 DNA polymerase III chi subunit, HolC n=1 Tax=Chr... 59 4e-08 UniRef50_Q1YRR0 DNA polymerase III, chi subunit n=1 Tax=gamma pr... 59 4e-08 UniRef50_A1WUV2 DNA polymerase III chi subunit, HolC n=1 Tax=Hal... 57 1e-07 UniRef50_C5V3L7 DNA polymerase III chi subunit HolC n=2 Tax=Gall... 56 3e-07 UniRef50_C4KAG2 DNA polymerase III chi subunit HolC n=1 Tax=Thau... 55 9e-07 UniRef50_A5EVT2 DNA polymerase III chi subunit n=1 Tax=Dicheloba... 55 9e-07 UniRef50_Q0AB76 DNA polymerase III chi subunit, HolC n=1 Tax=Alk... 54 1e-06 UniRef50_C8N9I8 DNA polymerase III, chi subunit n=1 Tax=Cardioba... 54 2e-06 UniRef50_A8PP43 DNA polymerase III, chi subunit n=1 Tax=Ricketts... 54 2e-06 UniRef50_C3X5D7 DNA polymerase III chi subunit n=2 Tax=Oxalobact... 53 2e-06 UniRef50_A4BLM8 DNA polymerase III subunit chi n=1 Tax=Nitrococc... 53 2e-06 UniRef50_A9IIK0 DNA polymerase III, chi subunit n=5 Tax=Bordetel... 53 3e-06 UniRef50_Q3SL84 Putative DNA polymerase III chi subunit n=1 Tax=... 53 3e-06 UniRef50_Q0EY83 DNA polymerase III subunit chi n=1 Tax=Mariprofu... 52 6e-06 UniRef50_B9ZL66 DNA polymerase III chi subunit HolC n=1 Tax=Thio... 52 6e-06 UniRef50_C6WT44 DNA polymerase III chi subunit HolC n=1 Tax=Meth... 50 2e-05 UniRef50_Q0AIF4 DNA polymerase III, chi subunit n=3 Tax=Nitrosom... 49 5e-05 UniRef50_C6MGG5 DNA polymerase III chi subunit HolC n=1 Tax=Nitr... 47 1e-04 UniRef50_A0LHL4 DNA polymerase III chi subunit n=1 Tax=Syntropho... 47 2e-04 UniRef50_A1TZ87 DNA polymerase III chi subunit, HolC n=3 Tax=Mar... 47 2e-04 UniRef50_D1R4C3 Putative uncharacterized protein n=1 Tax=Parachl... 46 3e-04 UniRef50_C7I265 DNA polymerase III chi subunit HolC n=1 Tax=Thio... 45 7e-04 UniRef50_B9MJ45 DNA polymerase III chi subunit HolC n=3 Tax=Coma... 45 8e-04 UniRef50_Q5NXM0 DNA polymerase III, chi subunit n=2 Tax=Rhodocyc... 45 0.001 UniRef50_C5TNX8 DNA polymerase III chi subunit n=8 Tax=Neisseria... 45 0.001 UniRef50_B4RJ23 HolC n=19 Tax=Neisseria RepID=B4RJ23_NEIG2 44 0.002 UniRef50_A1VP98 DNA polymerase III, chi subunit n=39 Tax=Burkhol... 43 0.003 UniRef50_A4BBY3 DNA polymerase III subunit chi n=1 Tax=Reinekea ... 42 0.004 UniRef50_A3M1A7 DNA polymerase III chi subunit n=18 Tax=Acinetob... 42 0.008 UniRef50_C8WFB0 DNA polymerase III chi subunit HolC n=3 Tax=Zymo... 41 0.011 UniRef50_B3R662 DNA POLYMERASE III, CHI SUBUNIT n=14 Tax=Burkhol... 41 0.014 UniRef50_Q2G9Y6 DNA polymerase III chi subunit, HolC n=2 Tax=Sph... 40 0.016 UniRef50_A5WBH1 DNA polymerase III, chi subunit n=1 Tax=Psychrob... 40 0.019 UniRef50_C7RP73 DNA polymerase III chi subunit HolC n=1 Tax=Cand... 39 0.040 UniRef50_B0SWN1 DNA polymerase III chi subunit HolC n=6 Tax=Alph... 39 0.044 UniRef50_Q0G6N2 DNA polymerase III subunit chi n=1 Tax=Fulvimari... 39 0.068 >UniRef50_P28905 DNA polymerase III subunit chi n=172 Tax=Gammaproteobacteria RepID=HOLC_ECOLI Length = 147 Score = 303 bits (777), Expect = 9e-82, Method: Compositional matrix adjust. Identities = 147/147 (100%), Positives = 147/147 (100%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP Sbjct: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE Sbjct: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 Query: 121 DSLKQLARERYKAYRVAGFNLNTATWK 147 DSLKQLARERYKAYRVAGFNLNTATWK Sbjct: 121 DSLKQLARERYKAYRVAGFNLNTATWK 147 >UniRef50_Q1LTH9 DNA polymerase III, chi subunit n=1 Tax=Baumannia cicadellinicola str. Hc (Homalodisca coagulata) RepID=Q1LTH9_BAUCH Length = 154 Score = 161 bits (407), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 71/141 (50%), Positives = 94/141 (66%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 MK TFY L+ T + L A+EQL + WR+GKR+LIACE QA ++D LWA+ Sbjct: 1 MKKVTFYRLNKKTIPNWLIAMEQLAYHLVVINWRAGKRILIACESNDQAKKIDHGLWAKT 60 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 +F+PHNL GEGP+ GAPVEI WP + + + RD++I+L DF +F E++DF+P E Sbjct: 61 PTAFIPHNLVGEGPKDGAPVEICWPHQYNYTPRDLIINLLPKCTDFIFSFNEIIDFIPDE 120 Query: 121 DSLKQLARERYKAYRVAGFNL 141 + KQLAR RYKAYR GF L Sbjct: 121 EFFKQLARNRYKAYRNVGFQL 141 >UniRef50_P43749 DNA polymerase III subunit chi n=33 Tax=Pasteurellaceae RepID=HOLC_HAEIN Length = 144 Score = 153 bits (387), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 71/142 (50%), Positives = 98/142 (69%), Gaps = 4/142 (2%) Query: 2 KNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPA 61 K A FY+L + T+ VE++ C +AA WRSGK+VLI+CE E QA +DE LW R Sbjct: 3 KTAQFYILTENCTL----TVEEIACNLAASIWRSGKKVLISCESEAQALEIDERLWQRDP 58 Query: 62 ESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYED 121 FVPHNL+GE + P+EI+W KR+ RRD+LI+L+ DF+ +FT+++DFVP +D Sbjct: 59 NEFVPHNLSGEATQYPTPIEISWLGKRNLQRRDLLINLQQEIPDFSHSFTQIIDFVPKDD 118 Query: 122 SLKQLARERYKAYRVAGFNLNT 143 +LK ARERYK R+ G+NL+T Sbjct: 119 ALKTQARERYKQLRLQGWNLST 140 >UniRef50_B5F9Q5 DNA polymerase III subunit chi n=6 Tax=Gammaproteobacteria RepID=B5F9Q5_VIBFM Length = 147 Score = 134 bits (338), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 65/147 (44%), Positives = 86/147 (58%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M A FY+L+ + + VC++A + RV + +D++QA +DEALW Sbjct: 1 MSQALFYVLEPTSPAATTDGQLKFVCQLAHYYYSQNARVYVLAQDKEQALLIDEALWQYD 60 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 F PHNL GEGP+ G+P+EI W RSS RR +LI+L A FA +F +VVDFVP E Sbjct: 61 VSEFTPHNLVGEGPKSGSPIEIGWGTLRSSGRRHVLINLAQEVASFAVSFAQVVDFVPCE 120 Query: 121 DSLKQLARERYKAYRVAGFNLNTATWK 147 + KQ ARERYK YR AG + T K Sbjct: 121 EKSKQQARERYKIYRNAGRAMQTEILK 147 >UniRef50_Q15PX3 DNA polymerase III, chi subunit n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15PX3_PSEA6 Length = 156 Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 63/144 (43%), Positives = 87/144 (60%), Gaps = 2/144 (1%) Query: 1 MKNATFYLLDNDTTVDGLSAVE-QLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWAR 59 M TFYLL+ + L C++AA+ + + +R ++ C+ + QA + DE LW Sbjct: 1 MSKVTFYLLEQEAEATSQQPAHLALACQLAAQCFSNKQRCVVMCQSQAQAEQFDELLWQL 60 Query: 60 PAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPY 119 P + FVPHNL GEGP+ G PVEI W Q+ S + +LI+L + DF F+ + DFVP Sbjct: 61 PNDRFVPHNLTGEGPQAGTPVEICW-QRPSQFNKPVLINLADNMPDFHGKFSRIYDFVPA 119 Query: 120 EDSLKQLARERYKAYRVAGFNLNT 143 D+LKQ ARERYK YR AG L+T Sbjct: 120 ADALKQQARERYKHYRAAGHQLDT 143 >UniRef50_Q7VQT1 DNA polymerase III, chi subunit n=2 Tax=Candidatus Blochmannia RepID=Q7VQT1_BLOFL Length = 153 Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 62/144 (43%), Positives = 84/144 (58%), Gaps = 2/144 (1%) Query: 2 KNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPA 61 K TFYLL + L+ +EQLVC + WR GK +LI C+ QA +++EALW Sbjct: 4 KQGTFYLLPFIHHKNDLNTIEQLVCHLTKIHWRLGKTILITCDTHDQAKKINEALWNFEK 63 Query: 62 ESFVPHNLAGEGPRGGAPVEIAWPQKRSSSR-RDILISLRTSFADFATAFTEVVDFVPYE 120 SF+PH L + P+ I W Q ++ R+ LI+L +F F E++DFVP E Sbjct: 64 NSFLPHGLFSKNTY-NIPITIYWSQCCYDNKYRNTLINLMQKNKNFFLNFHEIIDFVPNE 122 Query: 121 DSLKQLARERYKAYRVAGFNLNTA 144 D+LK+LAR RYK+YR GFNL T Sbjct: 123 DNLKKLARIRYKSYRSLGFNLKTT 146 >UniRef50_A4SSA6 DNA polymerase III, chi subunit n=2 Tax=Aeromonas RepID=A4SSA6_AERS4 Length = 177 Score = 122 bits (306), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 72/142 (50%), Positives = 85/142 (59%), Gaps = 8/142 (5%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M TFYL++ SAVE+L C++AAE W +G L C+DE QA RLDE LW P Sbjct: 27 MSQVTFYLMNEQDDAQA-SAVERLACQLAAESWGAGHLYLF-CDDEAQALRLDELLWQLP 84 Query: 61 AESFVPHNLAGEGPRGGAPVEIAW-PQKRSSSRRDILISLRTSFADFATAFTEVVDFVPY 119 E FVPH L GE G APVEI P KR +R LI+L FA F +VVDFVP Sbjct: 85 PERFVPHQLQGES--GQAPVEIGHQPPKRRYAR---LINLARETPLFAGHFAQVVDFVPT 139 Query: 120 EDSLKQLARERYKAYRVAGFNL 141 +++ KQ ARERYK YR AG L Sbjct: 140 DETQKQQARERYKHYRQAGHAL 161 >UniRef50_Q3II74 DNA polymerase III, chi subunit n=3 Tax=Alteromonadales RepID=Q3II74_PSEHT Length = 148 Score = 118 bits (296), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 63/142 (44%), Positives = 84/142 (59%), Gaps = 3/142 (2%) Query: 3 NATFYLL-DNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPA 61 NA F++L D ++ L +IAA+++R G+RV I ++E A+ +DE LWA Sbjct: 4 NAQFFVLKQQDESLAKPDDHLALAAQIAADQYRLGQRVFICVDNENTAFAIDETLWAFDP 63 Query: 62 ESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYED 121 +SFVPHNL GEGP+GGAPVEI R +LI+L + DF F +V DFVP E Sbjct: 64 DSFVPHNLQGEGPKGGAPVEIGT--TPPVGNRKVLINLANNLPDFIRRFNQVFDFVPVEA 121 Query: 122 SLKQLARERYKAYRVAGFNLNT 143 KQ ARER+K R G N+ T Sbjct: 122 VAKQAARERFKKLRQLGANITT 143 >UniRef50_Q0HXF4 DNA polymerase III chi subunit, HolC n=9 Tax=Shewanella RepID=Q0HXF4_SHESR Length = 154 Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 81/143 (56%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M A FYLL LS + QL C +A + + + ++V I C+D+ A+ +DE LW Sbjct: 1 MTQALFYLLPPMGVNTALSDMYQLACRLAQQGFINQQQVYIHCQDKNIAFEIDELLWQFE 60 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 +FVPHNL GEGP G+PVEI + + + R +LI+L FA F ++ DFV + Sbjct: 61 PSAFVPHNLKGEGPTTGSPVEIGFDRLGPNKSRQLLINLADQVPPFAVNFGQIFDFVAND 120 Query: 121 DSLKQLARERYKAYRVAGFNLNT 143 D K +ARERY+ YR G L T Sbjct: 121 DQHKAIARERYRQYRGLGIELTT 143 >UniRef50_Q488M5 DNA polymerase III, chi subunit n=1 Tax=Colwellia psychrerythraea 34H RepID=Q488M5_COLP3 Length = 157 Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 62/142 (43%), Positives = 89/142 (62%), Gaps = 7/142 (4%) Query: 6 FYLLDNDTT----VDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPA 61 FYLL +D T D SA+ C A+ +R +RV I +D++ A ++DE LWA + Sbjct: 8 FYLLKDDVTDEKEEDTRSAIYH-ACLQASHFYRQNQRVYIYAKDQQHAEQIDEMLWAFDS 66 Query: 62 ESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYED 121 +SFVPHNL GEGP+ GA VEI + + RR +LI+L ++ +FA F +VDFVP ++ Sbjct: 67 DSFVPHNLVGEGPKQGAMVEIGY--QAPQGRRPVLINLNSAVPNFANQFQFIVDFVPSDE 124 Query: 122 SLKQLARERYKAYRVAGFNLNT 143 +LKQ ARER+K R GF ++ Sbjct: 125 TLKQQARERFKTCRQWGFQVDN 146 >UniRef50_C3NVA1 DNA polymerase III chi subunit n=40 Tax=Vibrio RepID=C3NVA1_VIBCJ Length = 154 Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 78/143 (54%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M ATFYL+ D+ + Q V + G R+ + C+D+ A +L E W Sbjct: 6 MPTATFYLISRDSAQATPEGLAQYVLYLTRHFAAQGARIYLQCQDKPHAEQLAERFWQIE 65 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 E F+ HNL GEGP+ G +EI + S R + I+L + FA FTEVVDFVP Sbjct: 66 PEQFLAHNLVGEGPKSGTAIEIGYVGVSPSWNRQLAINLADNQTTFARTFTEVVDFVPCA 125 Query: 121 DSLKQLARERYKAYRVAGFNLNT 143 ++ KQLARERYK YR AG+ L T Sbjct: 126 ENAKQLARERYKLYRQAGYQLQT 148 >UniRef50_C4LA52 DNA polymerase III chi subunit HolC n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LA52_TOLAT Length = 159 Score = 111 bits (277), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 61/149 (40%), Positives = 83/149 (55%), Gaps = 7/149 (4%) Query: 1 MKNATFYLLDNDTT----VDGLS-AVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEA 55 M TFYLL ++ + DGLS V L C++ ER+R + + + + + QA +LDE Sbjct: 7 MPQVTFYLLPDEASPTQICDGLSHVVAVLACQLTTERFRQNQTLFLLTQTQVQAEQLDEM 66 Query: 56 LWARPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVD 115 LW + SFVPH L+ E APVEI + S R +LI+L FA F +++D Sbjct: 67 LWQQDPHSFVPHGLSDEATVTQAPVEIGTGMPKRS--RQVLINLADGIPAFAGRFAQIID 124 Query: 116 FVPYEDSLKQLARERYKAYRVAGFNLNTA 144 FVP ++ KQ ARERYK YR GF L T Sbjct: 125 FVPADEIQKQQARERYKQYRALGFTLETV 153 >UniRef50_A1SRZ0 DNA polymerase III chi subunit, HolC n=2 Tax=Psychromonas RepID=A1SRZ0_PSYIN Length = 160 Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 58/147 (39%), Positives = 81/147 (55%), Gaps = 4/147 (2%) Query: 1 MKNATFYLLDND--TTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWA 58 M FY+ + ++ +SA C IAA + K+V I + ++ A+ +DE LW Sbjct: 1 MSQVVFYVFTTEEKSSSVAISAHFAYACRIAAFFYAQNKKVFIYTDSKEDAFAVDEYLWQ 60 Query: 59 RPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVP 118 +SFVPHNL GEGP+ G PVEI+W + R ILI+L DFA F +++DFVP Sbjct: 61 FDGDSFVPHNLLGEGPKFGTPVEISW--QVPLHPRPILINLSQKTPDFAINFQKIIDFVP 118 Query: 119 YEDSLKQLARERYKAYRVAGFNLNTAT 145 + + K AR RY YR G L+T T Sbjct: 119 FPEPQKIAARIRYSTYRKMGLTLSTQT 145 >UniRef50_A1RHG9 DNA polymerase III chi subunit, HolC n=12 Tax=Shewanella RepID=A1RHG9_SHESW Length = 176 Score = 105 bits (263), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 50/126 (39%), Positives = 73/126 (57%) Query: 18 LSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPRGG 77 L A+ C++A + + + V I C+D+ A +DE LW +FVPHNL GEGP G Sbjct: 40 LGAMHLFACQLAQQAYIKQQLVYIHCQDKNLALEIDELLWQFEPTAFVPHNLKGEGPITG 99 Query: 78 APVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYEDSLKQLARERYKAYRVA 137 APVEI + + ++ R +LI++ FA F +++DFV +D K +ARERY+ YR Sbjct: 100 APVEIGFDRLGANKSRQLLINIADQAPPFAVNFGQIIDFVANDDQHKAVARERYRQYRDL 159 Query: 138 GFNLNT 143 G L T Sbjct: 160 GIELTT 165 >UniRef50_Q5QY16 DNA polymerase III chi subunit n=2 Tax=Idiomarina RepID=Q5QY16_IDILO Length = 149 Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 53/145 (36%), Positives = 84/145 (57%), Gaps = 6/145 (4%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M +ATF+L+ ++ + +L+C+ A+ +R K++ + +++QA LDE LW +P Sbjct: 1 MSSATFFLMPDEAEDEQ----NRLICDKIAQLYRKHKKLRVWARNQQQAEALDELLWQQP 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRD--ILISLRTSFADFATAFTEVVDFVP 118 +++F+PHNL GEGP GAPVE WP+ + R L +L A ++ D VP Sbjct: 57 SDAFIPHNLHGEGPATGAPVEFCWPEADAVKNRPGYALFNLAEEIPVQAQQSQQLYDIVP 116 Query: 119 YEDSLKQLARERYKAYRVAGFNLNT 143 +D+ K+ ARERYK YR G + T Sbjct: 117 ADDNGKKTARERYKHYRARGCQMQT 141 >UniRef50_B4RWP0 DNA polymerase III chi subunit n=1 Tax=Alteromonas macleodii 'Deep ecotype' RepID=B4RWP0_ALTMD Length = 140 Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 51/142 (35%), Positives = 82/142 (57%), Gaps = 8/142 (5%) Query: 1 MKNATFY-LLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWAR 59 M FY L +D V G ++ E+ A + + +++ + C+ + QA +DE LW Sbjct: 1 MPQVIFYQLTSSDNGVAGRAS------EVIASAFANKQKISVLCDTQAQAEEVDELLWQL 54 Query: 60 PAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPY 119 PA+ FVPHNL GEGP+ G PVEI W + +RR +++++ + +++DFVP Sbjct: 55 PADRFVPHNLYGEGPQSGTPVEICW-RPEQVARRQMVVNVGSGMVPSPNQHRQIIDFVPV 113 Query: 120 EDSLKQLARERYKAYRVAGFNL 141 +++ KQ AR RYK Y+ AG N+ Sbjct: 114 DENAKQAARVRYKNYQQAGCNM 135 >UniRef50_Q7MHG2 DNA polymerase III, chi subunit n=15 Tax=Vibrionales RepID=Q7MHG2_VIBVY Length = 149 Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 75/143 (52%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M+ ATFY++ T V +A + G +V + E ++ A ++ E W Sbjct: 1 MQRATFYIVREHTPQATPEGFAHYVVFLAHHFAKQGAKVYLNGESKRHAEQIAEYFWQVE 60 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 FV HNL GEGP+ +EI + S R ++I+L + FA F EVVDFVP E Sbjct: 61 PAQFVAHNLVGEGPKYATNIEIGHEGVKPSWNRQLVINLAKNETTFANKFAEVVDFVPCE 120 Query: 121 DSLKQLARERYKAYRVAGFNLNT 143 + KQLARERYK YR AG+ L T Sbjct: 121 EKAKQLARERYKIYRQAGYQLQT 143 >UniRef50_C7R5R1 DNA polymerase III chi subunit HolC n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R5R1_KANKD Length = 142 Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 53/142 (37%), Positives = 76/142 (53%), Gaps = 4/142 (2%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M F++L++ G A +LV + ++ G++V I DEKQA+ +DE LWA Sbjct: 1 MTQVEFHILESQP---GEEAYLRLVGQCVKSLYKQGRKVYIHAHDEKQAHAVDEYLWALD 57 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 F+PHN+ GEGP PV+I + Q + D LI+L F + F + + VP E Sbjct: 58 LNEFIPHNMVGEGPAKAPPVQIGFNQP-PEEQHDCLINLSRDVQPFFSYFLKCYEIVPNE 116 Query: 121 DSLKQLARERYKAYRVAGFNLN 142 D K+ ARERYK YR G+ L Sbjct: 117 DEHKESARERYKYYRGHGYPLQ 138 >UniRef50_UPI0000E0E595 DNA polymerase III subunit chi n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0E595 Length = 151 Score = 91.3 bits (225), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 49/142 (34%), Positives = 75/142 (52%), Gaps = 3/142 (2%) Query: 1 MKNATFY-LLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWAR 59 M A FY L + D T S++ L C++ A + KR+ + C D+ QA + LW Sbjct: 1 MTQANFYQLTEQDGTGFDASSIAVLACDLVARCYGEKKRLTVLCTDQAQAEAFSDLLWQH 60 Query: 60 PAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPY 119 P E F+ HN+AGEGP GGA VE+ W + S R I++++ + + DFVP Sbjct: 61 PPERFIAHNIAGEGPHGGAAVEVTWGNQ--SPIRSIVVNVAALQIPNPERYHTIYDFVPV 118 Query: 120 EDSLKQLARERYKAYRVAGFNL 141 ++ K AR+RY ++ AG + Sbjct: 119 AEADKIRARQRYAFFKRAGCQM 140 >UniRef50_A4VNZ8 DNA polymerase III, chi subunit n=2 Tax=Pseudomonas RepID=A4VNZ8_PSEU5 Length = 139 Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 47/140 (33%), Positives = 75/140 (53%), Gaps = 7/140 (5%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY+L +D + L A C++AA+ W+ G +V + C DE Q+ RLDE LW+ Sbjct: 1 MTRIEFYVLPDDNPLGRLRAA----CQLAAKGWQHGLQVFVRCSDEDQSTRLDELLWSFR 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 AE F+PH E + APV I Q+ ++ + +LI+L + + F+ V++ V E Sbjct: 57 AERFIPHEQYAEEVQ--APVVIGLEQEPPTA-QGLLINLAPTLSAHIDRFSRVIEIVNQE 113 Query: 121 DSLKQLARERYKAYRVAGFN 140 L RE ++ YR G++ Sbjct: 114 PQLLTACRENFRLYRRQGYD 133 >UniRef50_O68823 DNA polymerase III subunit chi n=20 Tax=Pseudomonadaceae RepID=HOLC_PSEAE Length = 142 Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 47/142 (33%), Positives = 74/142 (52%), Gaps = 7/142 (4%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY++ + SA Q+ C +A + WR G +V + C DE Q LD LW+ Sbjct: 1 MTRVDFYVIPSADP----SARLQVACRLAEKAWRQGMQVYLHCADEAQRSELDGRLWSFR 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 E+F+PH+LA E APV + + + RD+LI+L F F+ V + V E Sbjct: 57 GEAFIPHSLAEED--AEAPVALGLGEP-PGNHRDLLINLTLEAPGFVPNFSRVAELVVEE 113 Query: 121 DSLKQLARERYKAYRVAGFNLN 142 +++Q AR++++ YR G+ L Sbjct: 114 PAIRQAARDKFRFYREQGYPLQ 135 >UniRef50_Q0VSA6 DNA polymerase III, chi subunit n=2 Tax=Alcanivorax RepID=Q0VSA6_ALCBS Length = 148 Score = 78.2 bits (191), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 73/143 (51%), Gaps = 8/143 (5%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M TFYL ++ G + L IA + + G++V + C++E A +LD W P Sbjct: 10 MTEVTFYL----SSKVGEGVRQALAWRIADKALKQGRQVYVHCQNEAHARQLDAQFWQSP 65 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 F+PH L+ EG APV + + + D+LI+L DF++ F V + + + Sbjct: 66 PTGFLPHALSSEGQ---APVLLGFGDD-PGHQHDVLINLSDGVPDFSSRFQRVAEMISGD 121 Query: 121 DSLKQLARERYKAYRVAGFNLNT 143 ++ +Q RER++ YR GF + T Sbjct: 122 EAERQQGRERFRFYRDRGFPVTT 144 >UniRef50_Q5ZS87 DNA polymerase III, chi subunit n=6 Tax=Legionella RepID=Q5ZS87_LEGPH Length = 144 Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 44/120 (36%), Positives = 68/120 (56%), Gaps = 1/120 (0%) Query: 26 CEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVEIAWP 85 C + + + G + + C++++QA LDE LW +SF+PHNL GEGP PV+I + Sbjct: 24 CRLIEKAYTKGHTIFVFCDNQQQAEYLDELLWTFKDDSFIPHNLQGEGPEPPPPVQIGY- 82 Query: 86 QKRSSSRRDILISLRTSFADFATAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNLNTAT 145 QK DIL++L T+ F T F V++ V + K+++R YK YR G L+T + Sbjct: 83 QKEPRGFTDILLNLSTNIPIFYTRFKRVIELVSNVEHEKEVSRLHYKEYRHKGCELHTHS 142 >UniRef50_Q1N2A3 DNA polymerase III chi subunit, HolC n=1 Tax=Bermanella marisrubri RepID=Q1N2A3_9GAMM Length = 142 Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 43/142 (30%), Positives = 73/142 (51%), Gaps = 6/142 (4%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M + FY+L + LS C +A + ++ G+++ + +DE+QA +LD+ +W Sbjct: 1 MTSIDFYILGHSQQQARLS----FACRLAEKAFKEGRQIYVHAQDEQQAKQLDDLMWEYK 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 ESF+PH + GE VEI W Q S D+LI+L + F + F V++ V + Sbjct: 57 PESFLPHQIVGEQA-SQTQVEIGW-QDHPSHHFDVLINLVSPQPSFFSRFDRVLEIVIQD 114 Query: 121 DSLKQLARERYKAYRVAGFNLN 142 ++ +R YK YR G+ + Sbjct: 115 ETSLAQSRAHYKFYRDRGYEVT 136 >UniRef50_C0N7W1 DNA polymerase III, chi subunit superfamily n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N7W1_9GAMM Length = 142 Score = 75.1 bits (183), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 70/143 (48%), Gaps = 4/143 (2%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M +FY+L + T + A C +A + + G +V I ++ +Q+ LDEALWA Sbjct: 1 MTRVSFYILKS-TQFEKRQA---FACRLAEKAYHQGHQVYIHTDNAEQSAALDEALWAIR 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 ESFVPH + +PV I D+LI+L F + F V + + Sbjct: 57 PESFVPHEVINTDADNQSPVLIGHKDSTPPRLMDVLINLTEQQPLFFSQFDRVAEVIDDN 116 Query: 121 DSLKQLARERYKAYRVAGFNLNT 143 D +KQ R+R++ Y+ G+ L+T Sbjct: 117 DDVKQAGRQRFQFYKQRGYELDT 139 >UniRef50_Q3JEC9 DNA polymerase III chi subunit, HolC n=2 Tax=Nitrosococcus oceani RepID=Q3JEC9_NITOC Length = 143 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 5/143 (3%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FYLL + A ++ C++ + +R G +V I ED+ QA +D+ LW Sbjct: 1 MTKVDFYLLTSRQP----QASKRFTCKLIEKVYRLGHQVYIQVEDQAQAQEMDDLLWTFR 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 SFVPH L G PV I + + ++LI+L F + F V + + + Sbjct: 57 QGSFVPHALVNSEEATGTPVLIGY-DGEPGGKLELLINLGAEVPAFFSRFQRVAEVIGPD 115 Query: 121 DSLKQLARERYKAYRVAGFNLNT 143 ++ + R+RY+ YR G +L T Sbjct: 116 ETHRHAGRQRYRYYRDHGCSLET 138 >UniRef50_A7C6F2 DNA polymerase III chi subunit, HolC n=1 Tax=Beggiatoa sp. PS RepID=A7C6F2_9GAMM Length = 143 Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 41/143 (28%), Positives = 63/143 (44%), Gaps = 5/143 (3%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY+L A ++ C++ + W G R+ I QA +LD LW Sbjct: 1 MPQIDFYILHTQNRY----AKDRFTCQLTDKAWHQGYRIYIQTTSLAQAQQLDNFLWVFK 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 ESF+PH++ E AP+ I + + D+LI+L + F +F + + V Sbjct: 57 EESFLPHDIYPEMSESLAPIRIGYSAQVCEG-MDVLINLTETVPPFFESFQRIAEIVNDT 115 Query: 121 DSLKQLARERYKAYRVAGFNLNT 143 KQ R RY+ YR + L T Sbjct: 116 PYAKQAGRTRYRFYRDKAYVLKT 138 >UniRef50_A4A3Y4 DNA polymerase III chi subunit, HolC n=5 Tax=unclassified Gammaproteobacteria RepID=A4A3Y4_9GAMM Length = 142 Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 47/142 (33%), Positives = 70/142 (49%), Gaps = 9/142 (6%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWA-R 59 M FY+++N T S+ +L + + + G RV I E+E QA LDE LW R Sbjct: 1 MTRVGFYIVENTDT----SSRTRLALRLTEKAHKQGHRVFINSENEAQARELDELLWTFR 56 Query: 60 PAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPY 119 PA SF+PH L + + I W Q+ + D+LI+L+ S DF F V + V Sbjct: 57 PA-SFLPHALCSDD--SSEQICIGWGQE-PAGHDDLLINLQLSVPDFIGRFQRVAELVNQ 112 Query: 120 EDSLKQLARERYKAYRVAGFNL 141 E + + R ++ YR G+ L Sbjct: 113 EPARLEALRHSWRHYRERGYAL 134 >UniRef50_Q2BIS6 DNA polymerase III chi subunit, HolC n=1 Tax=Neptuniibacter caesariensis RepID=Q2BIS6_9GAMM Length = 146 Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 36/139 (25%), Positives = 70/139 (50%), Gaps = 6/139 (4%) Query: 4 ATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAES 63 A FY+L + A + +C + + G ++ I DE++A R+D+ LW E+ Sbjct: 5 ADFYVLPSSDP----DARGRFLCRLVEKIGALGHQIYIQTPDEQEAKRIDQLLWEYRPEA 60 Query: 64 FVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYEDSL 123 F+PH+L G+ + +PV+I W ++R +D+ ++L A F +++ V + + Sbjct: 61 FIPHHLLGDD-KISSPVQIGWNEQR-PEHKDVYVNLNLDIPQDALEFERILEVVVQTEDV 118 Query: 124 KQLARERYKAYRVAGFNLN 142 R+ YK Y+ G ++ Sbjct: 119 LTSTRKNYKTYQSNGIQID 137 >UniRef50_Q3BP99 DNA polymerase III holoenzyme chi subunit n=25 Tax=Xanthomonadaceae RepID=Q3BP99_XANC5 Length = 141 Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 49/143 (34%), Positives = 74/143 (51%), Gaps = 7/143 (4%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M A FYL+ L+ +LVCE+A + + LI D +QA LD+ LWA Sbjct: 1 MPRADFYLI---AKPRFLNEPLRLVCELARKANDANLPTLILARDTQQAEALDDLLWAFD 57 Query: 61 AESFVPHNLAGEGPRGG-APVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPY 119 E++VPH +AG APV IA P+ + S R ++I+LR + A V++ VP Sbjct: 58 DEAYVPHQIAGTDEEDELAPVLIAAPEFAAPS-RPLVINLRDD--PYLGACDRVLEVVPA 114 Query: 120 EDSLKQLARERYKAYRVAGFNLN 142 + + ++ RER+K Y+ G L Sbjct: 115 DPAAREPLRERWKQYKALGLELT 137 >UniRef50_C5S9R7 DNA polymerase III chi subunit HolC n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S9R7_CHRVI Length = 143 Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 44/139 (31%), Positives = 65/139 (46%), Gaps = 5/139 (3%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY L+ D+ D +LV I A+ R VLI C D ++A LD LW Sbjct: 1 MTRVDFYSLEPDSRGDRFILACRLVERIRAQDLR----VLILCPDREEARHLDRLLWTMR 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 ESF+PH L G P+ I+ S +L++L + F + D V + Sbjct: 57 QESFLPHGLVGTVDTDLTPILISL-DGASEHGCPVLLNLSRALPAGLERFERLCDLVDND 115 Query: 121 DSLKQLARERYKAYRVAGF 139 +++Q RER++AYR G+ Sbjct: 116 PAVRQAGRERFRAYRERGY 134 >UniRef50_B3PDI9 DNA polymerase III, chi subunit n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PDI9_CELJU Length = 139 Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 7/143 (4%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY+L T+ A C + + R G +L+A ++ +QA DE LW Sbjct: 1 MTQVDFYVLPETTS----EARWLFACRLIEKVQRMGMDILVAVDNPEQAREFDELLWTFK 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 ESF+PH L + APV+I + Q+ S + + +L++L + + F + + V E Sbjct: 57 PESFIPHQLL--DIQQPAPVQITYNQE-SGNHQGLLLNLSSGIPPYFDRFARLSEIVIQE 113 Query: 121 DSLKQLARERYKAYRVAGFNLNT 143 + + +RER+ Y+ G+ + T Sbjct: 114 EKALKTSRERFSFYKGRGYPIET 136 >UniRef50_Q2SKR1 DNA polymerase III, chi subunit n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SKR1_HAHCH Length = 141 Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 41/145 (28%), Positives = 74/145 (51%), Gaps = 12/145 (8%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M A F+LL + ++ + +C + + +R G R+ I C+D K+ LD+ L++ Sbjct: 1 MPKADFHLLSSG----DIAQRDFYLCRLCEKIYRLGHRIYILCKDSKELEHLDDLLYSFR 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIA--WPQKRSSSRRDILISLRTSFADFATAFTEVVDFVP 118 ESF+PH++ E P PV + P+ S+ +++I+L + D A V++ V Sbjct: 57 PESFIPHSIEPEPPSSDIPVFLCTRLPETIST---EVVINLTEAPPDKA---DRVIELVT 110 Query: 119 YEDSLKQLARERYKAYRVAGFNLNT 143 + + +R+ YK Y+ GF L T Sbjct: 111 GDPGARAKSRKVYKLYKQLGFELQT 135 >UniRef50_Q1H4U3 DNA polymerase III, chi subunit n=2 Tax=Methylophilaceae RepID=Q1H4U3_METFK Length = 154 Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 1/119 (0%) Query: 25 VCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVEIAW 84 V +++ + G+R+++ ++ A +L LW+ P F+PH A PV I W Sbjct: 17 VASLSSRAVQRGRRLMVLASTQQAAEQLGSFLWSSPPTGFLPHCHATHPRAAETPVIIDW 76 Query: 85 PQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNLNT 143 + DILI+L + + F + F +++ V E+ + ARERY+ YR G+ L T Sbjct: 77 -RHEPLPHDDILINLDSQYPPFFSRFRRLIEIVGLEEEDRAAARERYRFYRDRGYELRT 134 >UniRef50_B8GTX7 DNA polymerase III chi subunit HolC n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GTX7_THISH Length = 147 Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 7/142 (4%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY+LD+ L + C + + + G R+ + + +LD+ LW Sbjct: 1 MTRIDFYVLDDTDPGQRL----RTACRLIGKAYGLGHRIHVHTGSRALSMQLDDLLWTFR 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 SF+PH + GE PV+I Q+ ++ DIL++L T F + F V + V + Sbjct: 57 DVSFIPHQVEGEDAE--CPVQICHDQEPQNAG-DILVNLDTQVPLFFSRFERVAEIVNQD 113 Query: 121 DSLKQLARERYKAYRVAGFNLN 142 +++ RERY+ Y+ G++L+ Sbjct: 114 PAIRDAGRERYRFYKDRGYDLS 135 >UniRef50_B5EKZ3 DNA polymerase III chi subunit HolC n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EKZ3_ACIF5 Length = 141 Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 48/150 (32%), Positives = 68/150 (45%), Gaps = 21/150 (14%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQL--VCEIAAERWRSGKRVLIACEDEKQAYRLDEALWA 58 M A+FY L L+A EQ +C + A+ W+ I C D + LD+ LW Sbjct: 1 MPVASFYTLPPTL----LTAHEQRRGMCRVIAKVWQVMGEADILCPDTEAGQTLDDLLWT 56 Query: 59 RPAESFVPHNLAGEGPRG-GAPVEI----AWPQKRSSSRRDILISLRTSFADFATAFTEV 113 A +FVPH RG G PV I AWP + + +L L A + Sbjct: 57 FQAGAFVPHA------RGAGEPVRIHENGAWPLQ---GKALVLCGLDKLPAPLPPC-ERL 106 Query: 114 VDFVPYEDSLKQLARERYKAYRVAGFNLNT 143 +DF+P + L+ ARERY+ + AGF + Sbjct: 107 IDFIPVAEQLRGFARERYRQLKNAGFTMQV 136 >UniRef50_C6NVB1 DNA polymerase III chi subunit n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NVB1_9GAMM Length = 143 Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 15/152 (9%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQ--LVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWA 58 M +A+FY L + L+A EQ VC + A+ W+ +V I C DE+ A +D+ LW Sbjct: 1 MPSASFYRLPANL----LTATEQHRAVCRVVAKAWQVLGQVNILCRDEELAESMDDLLWT 56 Query: 59 RPAESFVPHNLAGEGP---RGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVD 115 A +F PH + P G + P + L+ LR + A ++D Sbjct: 57 YQAGAFTPHGRDPQEPVCLYAGTDASVLRPAPALA-----LVGLRELPGNLPDA-ARLLD 110 Query: 116 FVPYEDSLKQLARERYKAYRVAGFNLNTATWK 147 F+P ++S AR+RY+ R AG+ + T T + Sbjct: 111 FIPPDESGVADARQRYRILREAGYTIQTYTLE 142 >UniRef50_Q31ET2 DNA polymerase III, chi subunit n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31ET2_THICR Length = 146 Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 39/138 (28%), Positives = 70/138 (50%), Gaps = 8/138 (5%) Query: 2 KNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPA 61 K+ FY+L DT + + +LV +I E+ R R A EDE R D +LW Sbjct: 9 KDVIFYVLGTDTAQQREAFMAKLVNKIHREKRRCDIR--FASEDE--MTRFDLSLWQYQP 64 Query: 62 ESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYED 121 E+F+PH++ AP+++ W + ++ +D+L+++ F + ++ + + Sbjct: 65 EAFIPHSVQQTV---QAPIQL-WADQIATPCQDVLLNVHPDFPQNFQLYNRTIEVLDQTE 120 Query: 122 SLKQLARERYKAYRVAGF 139 L Q+ RER+KAY+ G Sbjct: 121 HLIQMGRERWKAYKKEGL 138 >UniRef50_A0LB28 DNA polymerase III, chi subunit n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LB28_MAGSM Length = 157 Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 42/136 (30%), Positives = 65/136 (47%), Gaps = 8/136 (5%) Query: 6 FYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFV 65 FY L D+ E+ + +I + + G RV I ED +QA LDE LW P +SF+ Sbjct: 13 FYQLATDSR-------ERALLKILNKVYGMGLRVCIVVEDRQQAQGLDEHLWRHPPDSFL 65 Query: 66 PHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYEDSLKQ 125 PH + + P+ I+ Q + +++ L + F VVDFVP + K+ Sbjct: 66 PHATSVDPFPEAQPILISE-QPVDPNGATVVVMLTPVPLENLDQFDTVVDFVPDDPQAKR 124 Query: 126 LARERYKAYRVAGFNL 141 +R RYK Y+ A + Sbjct: 125 ASRLRYKHYKDAQCQM 140 >UniRef50_Q7R6X2 Cytosol aminopeptidase (Fragment) n=3 Tax=cellular organisms RepID=Q7R6X2_PLAYO Length = 612 Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 13/143 (9%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLV---CEIAAERWRSGKRVLIACEDEKQAYRLDEALW 57 M FYLL A E L+ C + + +R G V + + + +A +LD+ LW Sbjct: 478 MTRVDFYLL---------PAGESLLSYACRLTEKAYRQGHTVFLVTDTDDEAAQLDDMLW 528 Query: 58 ARPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFV 117 SFVPH A G P +A ++ D++I+L ++ + F V++ V Sbjct: 529 TFRQGSFVPHR-AVTGHTAAGPCPVAVGREPPVGFDDVMINLGSAVPEAFRRFRRVIELV 587 Query: 118 PYEDSLKQLARERYKAYRVAGFN 140 +D+ + L RE ++ YR G N Sbjct: 588 GPDDAARALKREHFRHYRSEGLN 610 >UniRef50_A0YCI5 DNA polymerase III subunit chi n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YCI5_9GAMM Length = 145 Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 7/145 (4%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY+L D++ C +A + ++ G + I D QA LDE LW+ Sbjct: 1 MTKIDFYILPYDSS----EQRHLFACRLAEKAFKLGNEIYIHGSDGDQAKALDELLWSWR 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKR--SSSRRDILISLRTSFADFATAFTEVVDFVP 118 SF+PH + + P+ I + + + S +LI+L +F + F V + V Sbjct: 57 NTSFIPHKI-DDNSTDEQPLHIGFGKDKQMSGDHNGLLINLSDHVPEFFSRFERVSEIVV 115 Query: 119 YEDSLKQLARERYKAYRVAGFNLNT 143 + ++ + R Y+ Y+ G++L+T Sbjct: 116 QDSAVTESTRANYRFYKNRGYHLDT 140 >UniRef50_Q3A4B4 DNA polymerase III, chi subunit n=2 Tax=Desulfuromonadales RepID=Q3A4B4_PELCD Length = 138 Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 7/121 (5%) Query: 25 VCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPH---NLAGEGPRGGAPVE 81 +CE+A + G+RVL+ D+ Q LD +W +F+PH N A + +E Sbjct: 18 LCELAEHFFTQGQRVLVMVCDDNQGVTLDRFMWTWKKGAFIPHVYDNGAVDCLDEPVIIE 77 Query: 82 IAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVP-YEDSLKQLARERYKAYRVAGFN 140 + ++R+ + +LI + DF F V+DF YE LK AR+RY +R GF Sbjct: 78 V---EERNPNNAGVLIMGKPCSLDFIRQFDLVIDFAELYEPQLKVAARKRYAHFRETGFE 134 Query: 141 L 141 + Sbjct: 135 V 135 >UniRef50_Q21KZ6 DNA polymerase III chi subunit, HolC n=2 Tax=Alteromonadales RepID=Q21KZ6_SACD2 Length = 149 Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 9/129 (6%) Query: 23 QLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGE--------GP 74 Q C +A + G +VLIA +DE + +DE LW + ESFVPH++ G+ P Sbjct: 19 QFACRLAEKAVSRGNKVLIATQDEAASRAVDELLWTQRPESFVPHHIVGQNTDGQSSYAP 78 Query: 75 RGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYEDSLKQLARERYKAY 134 PV I D+L+++RT+ + + F + + V + + + R+ Y Y Sbjct: 79 TAKPPVVITH-DLDDIDHHDVLVNIRTTRPEQFSRFDRLAEIVIQQPEVLENTRQSYAFY 137 Query: 135 RVAGFNLNT 143 + G+ + T Sbjct: 138 KQRGYPVQT 146 >UniRef50_Q1QTE2 DNA polymerase III chi subunit, HolC n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QTE2_CHRSD Length = 150 Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 5/142 (3%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY+L DTT+D A C +A R G R+ I EDE A LDE LW Sbjct: 1 MTQVDFYILP-DTTLDARLA---FACRLAETIHRKGYRLHIHTEDETMARELDERLWTFK 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 ES++PH + G+ PV + W + + + +++L ++ + F V + + Sbjct: 57 PESYLPHAVLGDDVSPEPPVTLGW-EAPPAPGVEAMLNLHPEIPEWFSRFERVAEIINQH 115 Query: 121 DSLKQLARERYKAYRVAGFNLN 142 + R ++ Y+ G+ + Sbjct: 116 QDVLTAKRACWQTYKKRGYPVK 137 >UniRef50_Q1YRR0 DNA polymerase III, chi subunit n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YRR0_9GAMM Length = 143 Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 38/142 (26%), Positives = 66/142 (46%), Gaps = 9/142 (6%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M + +FY L D L LVC++ + + ++VL D A +LD+ LW Sbjct: 1 MTSVSFYKLSGD-----LQVALALVCQLTQKAVNAKQQVLCLVPDNDTAEQLDKLLWGFQ 55 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 A +FVPH + E P+ I+ ILI+L+ + + + F V++ + E Sbjct: 56 ASAFVPHGVGIE----HLPIAISADSSDPGEHHGILINLQGAIPTWFSRFERVMEVIYPE 111 Query: 121 DSLKQLARERYKAYRVAGFNLN 142 +Q R+ +K Y+ G+ L+ Sbjct: 112 PDYEQAKRDNFKFYKERGYPLS 133 >UniRef50_A1WUV2 DNA polymerase III chi subunit, HolC n=1 Tax=Halorhodospira halophila SL1 RepID=A1WUV2_HALHL Length = 140 Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 8/138 (5%) Query: 6 FYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFV 65 FY+LD G + E+ C +A + + +G VL+ ED++Q RLD LW SFV Sbjct: 3 FYILDGP----GEAPRERFACRLAEKAYENGYGVLLLTEDDEQTERLDALLWTFRQGSFV 58 Query: 66 PHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYEDSLKQ 125 PH A R G PV + + + +LI+L A + + V +++ + Sbjct: 59 PH--ATLAARDGEPVAVGGDEHAADDA--VLINLTDRTPATWQARQRIAEVVDQREAVLR 114 Query: 126 LARERYKAYRVAGFNLNT 143 +R+RY+ Y+ AG +T Sbjct: 115 ASRQRYRIYKEAGCEPHT 132 >UniRef50_C5V3L7 DNA polymerase III chi subunit HolC n=2 Tax=Gallionellaceae RepID=C5V3L7_9PROT Length = 141 Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 6/132 (4%) Query: 13 TTVD---GLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNL 69 T VD G S + C+++ + + G R +I+ D LD+ LW P +F+PH Sbjct: 2 TKVDFYTGSSDKLRTACQLSHKAMQHGLRTVISLPDAVSCEMLDKLLWQYPDTAFIPHCD 61 Query: 70 AGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYEDSLKQLARE 129 A APV ++ ++ + D+LI+L F + F V++ + ++ + RE Sbjct: 62 ASSP--DSAPVYLSLGEE-NFPHHDMLITLHNECTPFFSRFERVIEIIGTDEDDSRRGRE 118 Query: 130 RYKAYRVAGFNL 141 R+K YR G+ + Sbjct: 119 RFKFYRDRGYEM 130 >UniRef50_C4KAG2 DNA polymerase III chi subunit HolC n=1 Tax=Thauera sp. MZ1T RepID=C4KAG2_THASP Length = 146 Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 55/127 (43%), Gaps = 13/127 (10%) Query: 24 LVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPH-----NLAGEGP--RG 76 L E+AA G++V + C D Q RLD+ALW FVPH LA E P G Sbjct: 17 LAHELAAGAHARGRKVALRCTDATQLRRLDQALWTAVPLDFVPHVGVGSALAAETPVVLG 76 Query: 77 GAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYEDSLKQLARERYKAYRV 136 A WP D+L +L A F VV+ V + + AR R+ AYR Sbjct: 77 AAGEPCPWPHA------DMLFNLADDVPAEAEGFRMVVEIVGRDAAEVHAARLRWAAYRQ 130 Query: 137 AGFNLNT 143 G+ L Sbjct: 131 RGYELKA 137 >UniRef50_A5EVT2 DNA polymerase III chi subunit n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EVT2_DICNV Length = 141 Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 6/139 (4%) Query: 6 FYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFV 65 FY+L++ T ++A VC + + + + + C DE A +L+ LW+ AESF+ Sbjct: 5 FYVLNSQT----IAARLHFVCRLCEKAMAARQHTAVLCADEAMAAQLNALLWSFRAESFI 60 Query: 66 PHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRT-SFADFATAFTEVVDFVPYEDSLK 124 PH L+ + A V + +R +++ ++ I+L D V + V ++ Sbjct: 61 PHALSDDALAAHAAVMLLIAPER-AAQTNVFINLSADELPDIPQGCQRVFEVVDQSPAVL 119 Query: 125 QLARERYKAYRVAGFNLNT 143 + R R+K YR G T Sbjct: 120 AVTRRRFKHYRARGITPET 138 >UniRef50_Q0AB76 DNA polymerase III chi subunit, HolC n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AB76_ALHEH Length = 146 Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 44/135 (32%), Positives = 62/135 (45%), Gaps = 10/135 (7%) Query: 6 FYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKR-VLIACEDEKQAYRLDEALWARPAESF 64 FY+L+ T D + E+ CE+ A+ G R + I D +QA RLD LW ESF Sbjct: 11 FYVLNRAT--DPVQR-ERFACELVAKGLEHGVRHIHIQVHDPQQARRLDTLLWTFRKESF 67 Query: 65 VPHNLAGEGPRGGAPVEIAWPQKRSSSRRD-ILISLRTSFADFATAFTEVVDFVPYEDSL 123 +PH + E PV I R R D +LI+L TAF V + V + + Sbjct: 68 IPHAVQAEA--EDEPVVIG---DRPEPRPDALLINLAADIPPEWTAFGRVFEVVVQDPEI 122 Query: 124 KQLARERYKAYRVAG 138 R ++ Y+ AG Sbjct: 123 LHTTRSHFRTYQQAG 137 >UniRef50_C8N9I8 DNA polymerase III, chi subunit n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N9I8_9GAMM Length = 152 Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 41/121 (33%), Positives = 62/121 (51%), Gaps = 6/121 (4%) Query: 6 FYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFV 65 FY+L + + GL +L C++A + + + LI C DE A +LD ALW A+SF+ Sbjct: 12 FYVLPDGS---GLENRLELACKLAEKAQQERLKTLIICADEHMAAQLDHALWHYRADSFL 68 Query: 66 PHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFA-DFATAFTEVVDFV-PYEDSL 123 H +G+ A V +A P +R +R D+LI+L A D V + V P D L Sbjct: 69 THCRSGDPLEAEAAVLLAVPPER-IARTDVLINLSQETAPDLPRDCARVFEIVTPQPDVL 127 Query: 124 K 124 + Sbjct: 128 Q 128 >UniRef50_A8PP43 DNA polymerase III, chi subunit n=1 Tax=Rickettsiella grylli RepID=A8PP43_9COXI Length = 146 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/122 (24%), Positives = 57/122 (46%), Gaps = 7/122 (5%) Query: 26 CEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNL----AGEGPRGGAPVE 81 C + + + K++ I ++ R DE LW SF+PH + P + Sbjct: 24 CRLIDKAFLQHKKIFIQVNTAEEGQRFDELLWTFRDISFIPHRYLEVDSSIDPLLTVHIA 83 Query: 82 IAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNL 141 + P + + DIL++L T D+ + F+ +++ V E+ K +R++YK Y+ +L Sbjct: 84 VNKPVELHA---DILLNLSTRVPDYFSTFSRIIEVVSEENENKNQSRQKYKFYKTQQCHL 140 Query: 142 NT 143 T Sbjct: 141 MT 142 >UniRef50_C3X5D7 DNA polymerase III chi subunit n=2 Tax=Oxalobacter formigenes RepID=C3X5D7_OXAFO Length = 141 Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 28/105 (26%), Positives = 49/105 (46%) Query: 38 RVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILI 97 R++I D RLD+ALW F+PH + G+ +PV + + + IL+ Sbjct: 32 RIVILSSDRNLLNRLDDALWTFSDSDFLPHAMLGDRLASRSPVLLTYDDQCEMPHHQILV 91 Query: 98 SLRTSFADFATAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNLN 142 +L + F +++ V E + + R+RY YR G+ L+ Sbjct: 92 NLSPAIPACYARFDRLIELVSTETADTEAGRQRYVHYRERGYALH 136 >UniRef50_A4BLM8 DNA polymerase III subunit chi n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BLM8_9GAMM Length = 144 Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 61/133 (45%), Gaps = 8/133 (6%) Query: 6 FYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFV 65 FY+L TTV +A E C + + +R G RV I D+ LD LW A SFV Sbjct: 9 FYVL---TTVAA-AARELFCCRLTEKAYRQGYRVFILTGDKALTQALDLQLWTFRAGSFV 64 Query: 66 PHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYEDSLKQ 125 PH G+ PV + R + D+LI+L + + + + V + + Sbjct: 65 PHATLGQA--DDEPVVLGEQPPRLAV--DLLINLAAHCPNHWQRLSRIAEIVTQQPESLE 120 Query: 126 LARERYKAYRVAG 138 LARER++ YR G Sbjct: 121 LARERFRCYRNDG 133 >UniRef50_A9IIK0 DNA polymerase III, chi subunit n=5 Tax=Bordetella RepID=A9IIK0_BORPD Length = 147 Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 2/120 (1%) Query: 26 CEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVEIAWP 85 C+ A +R+++G+R+++ C D + D LWA SFVPH LA + PV + Sbjct: 20 CQAARKRYQAGQRLVVYCADGARLAAFDRMLWAFDDVSFVPHVLATDPLAADTPVILTAA 79 Query: 86 QKRSSSRRD--ILISLRTSFADFATAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNLNT 143 + ++ D L++L F V++ V + + +Q AR+R++ Y+ AG ++ Sbjct: 80 APQPAAAGDEPWLLNLDDDCPPGYDGFARVLEIVSDDPADRQAARQRWRVYQAAGHTPHS 139 >UniRef50_Q3SL84 Putative DNA polymerase III chi subunit n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SL84_THIDA Length = 143 Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 1/116 (0%) Query: 28 IAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVEIAWPQK 87 +AA+ + GK+V+I D A +D LW PA FVPH + PV I Sbjct: 20 VAAKAYGQGKQVMIYAPDAAVAGAVDRMLWTTPALGFVPHARDSDALAAETPVLIG-ADA 78 Query: 88 RSSSRRDILISLRTSFADFATAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNLNT 143 + D++I+L ++ F +V+ V +D+ ++ R RY+ Y+ G+ L T Sbjct: 79 GALRHADVMINLDSAQPPAFGRFERLVEIVGTDDAEREQGRARYRFYQSRGYALKT 134 >UniRef50_Q0EY83 DNA polymerase III subunit chi n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EY83_9PROT Length = 146 Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 11/138 (7%) Query: 6 FYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFV 65 F LL+N V+G++ + + +L+ C D A +LDE LW ESF+ Sbjct: 9 FELLENPDRVEGIARLLLRRNRLTPS-------LLVLCPDPGFAAQLDERLWTIHPESFL 61 Query: 66 PHNLAGEGPRGGA--PVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVP-YEDS 122 H +AG A P+ +A R ++ +LI+ + F +VDFV +++ Sbjct: 62 AHAVAGNDTAQNARQPILLATSIIRDNNPA-VLINGGLEVPPDISGFAHLVDFVDGWDEG 120 Query: 123 LKQLARERYKAYRVAGFN 140 LKQ ARER++ Y G + Sbjct: 121 LKQAARERFRTYSQMGLD 138 >UniRef50_B9ZL66 DNA polymerase III chi subunit HolC n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZL66_9GAMM Length = 139 Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 61/141 (43%), Gaps = 7/141 (4%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M + +FYLL + A + C +A + G RV I + LDE LW Sbjct: 1 MTHVSFYLLQDPAP----EARLRFTCRLAKKASGQGHRVHIHTGSPELTRTLDEWLWTFE 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 +F+PH+ PV + S R D+LI+L ++ F V D V E Sbjct: 57 DTTFLPHSTDVRN--TDVPVSLHEAHA-PSDRCDVLINLAADVPEYCGRFERVADIVGGE 113 Query: 121 DSLKQLARERYKAYRVAGFNL 141 +S ++ R RY+ ++ G+ L Sbjct: 114 ESEREAGRARYRYFKERGYPL 134 >UniRef50_C6WT44 DNA polymerase III chi subunit HolC n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WT44_METML Length = 140 Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 5/128 (3%) Query: 16 DGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPR 75 D L+ V +L A+R +++ I +D+ + + LW A SF+P G + Sbjct: 12 DKLAKVAELCDRAVAKR----RQLTIFTQDDVMSANVQALLWQHSATSFLPSAYPGSPEQ 67 Query: 76 GGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYEDSLKQLARERYKAYR 135 + I + + DILI+L+ F + F +V+ V +D+ K LAR RYK YR Sbjct: 68 DDVAI-IVDKEGTQLLQDDILINLKAEHPPFFSRFKYLVELVGADDADKALARARYKFYR 126 Query: 136 VAGFNLNT 143 G+ + + Sbjct: 127 DRGYQIKS 134 >UniRef50_Q0AIF4 DNA polymerase III, chi subunit n=3 Tax=Nitrosomonadaceae RepID=Q0AIF4_NITEC Length = 142 Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 7/122 (5%) Query: 24 LVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPV--- 80 + C + ++ + G + ++ D + A R D+ LW SFVPH A + G PV Sbjct: 16 IACRLCSKAVQQGLKTVVYIPDAELANRFDKLLWTFSPTSFVPHCQADDKLAGVTPVILN 75 Query: 81 -EIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYEDSLKQLARERYKAYRVAGF 139 ++ P+ + D+L++L + F VV+ V + K AR+RY+ Y+ G Sbjct: 76 NQLEMPE---VAYFDVLLNLDAAIPSGFEHFKRVVEIVDEIEDSKLHARKRYRRYQELGH 132 Query: 140 NL 141 ++ Sbjct: 133 DI 134 >UniRef50_C6MGG5 DNA polymerase III chi subunit HolC n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MGG5_9PROT Length = 159 Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 1/120 (0%) Query: 23 QLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPH-NLAGEGPRGGAPVE 81 Q C + A+ + RVLI K +LD+ LW + SF+PH N+ + A Sbjct: 28 QTTCRLCAKAIQQHMRVLIYVPASKLLDQLDQLLWTFSSTSFIPHCNILDDAKLVSATPV 87 Query: 82 IAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNL 141 I Q + +S D+LI+L F +++ K ARERY+ Y+ AG+ + Sbjct: 88 ILSGQIQVNSPFDVLINLHDQSPHLFDQFDRLIEIAGTSHEDKLAARERYRFYKNAGYEI 147 >UniRef50_A0LHL4 DNA polymerase III chi subunit n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LHL4_SYNFM Length = 152 Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 4/110 (3%) Query: 23 QLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVE- 81 +L+C I + +G++V + + A +D+ LW SFVPH + P G P+E Sbjct: 18 KLLCNIVEHFYEAGRKVQVVADSTLGAQHIDQMLWTFSDRSFVPHRIL--DPGRGTPLEP 75 Query: 82 -IAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYEDSLKQLARER 130 + +R D ++ DF TAF V FV +D ++L R Sbjct: 76 VVITVGERILDGFDTVVCDAECRLDFMTAFETAVHFVIRDDVDRRLQSRR 125 >UniRef50_A1TZ87 DNA polymerase III chi subunit, HolC n=3 Tax=Marinobacter RepID=A1TZ87_MARAV Length = 169 Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 18/116 (15%) Query: 33 WRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEG------PRG---GAPVEIA 83 W+ G RV + C+ E+QA LD+ LW E+F+PH++A P G P + Sbjct: 53 WQQGDRVCVLCDTEEQALELDDLLWNFTPEAFIPHSIAKAATTPCSDPVGILLYPPAAVD 112 Query: 84 WPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYEDSLKQLARERYKAYRVAGF 139 W D +I L ++ + A + + + ++ AR YK R G Sbjct: 113 W---------DTVIVLSSALPEDADQYRRLALVAHNDPAVLNQARGHYKQLRSLGI 159 >UniRef50_D1R4C3 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R4C3_9CHLA Length = 151 Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 3/110 (2%) Query: 25 VCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVEIAW 84 +CE + + KR+LIA +E+ A L+ LW +P ESF+PH + + + Sbjct: 24 ICETVRQHFAKQKRILIAAPNEEAARYLNALLWKQPEESFLPHIWSESQTEECVAITFS- 82 Query: 85 PQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYEDSLKQLARERYKAY 134 K + ++ +L++L S +F ++ D D KQ A E Y Sbjct: 83 --KNNVNQAAVLLNLCPSVHFEWDSFEQIYDLFDETDPEKQKASESRHVY 130 >UniRef50_C7I265 DNA polymerase III chi subunit HolC n=1 Tax=Thiomonas intermedia K12 RepID=C7I265_THIIN Length = 141 Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 38/120 (31%), Positives = 51/120 (42%), Gaps = 10/120 (8%) Query: 26 CEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPH-----NLAGEGPRGGAPV 80 C + + G RVL+A E LD LW SFVPH LA + P AP+ Sbjct: 19 CGLLRTATQRGARVLVAAP-EPLLTELDPLLWTFQPGSFVPHVWQDDPLADKTPVILAPL 77 Query: 81 EIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYEDSLKQLARERYKAYRVAGFN 140 P + R L++L + V++ V K ARER +AYR AGF+ Sbjct: 78 ----PDLPRAGRVTALVNLGPDLVTGWESLERVIELVSENGPDKPAARERLRAYRAAGFD 133 >UniRef50_B9MJ45 DNA polymerase III chi subunit HolC n=3 Tax=Comamonadaceae RepID=B9MJ45_DIAST Length = 146 Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 54/121 (44%), Gaps = 7/121 (5%) Query: 25 VCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAG---EGPRGGAPVE 81 VC + + R RV + D RLD LWA FV H L E R V Sbjct: 17 VCRLVRKATRQEARVTVTG-DADTLLRLDRQLWALAPSDFVGHCLGDADEEILRASPTVL 75 Query: 82 IAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYED-SLKQLARERYKAYRVAGFN 140 + P R+S RD+L++L + + VV+ V D ++ ARER++ Y G++ Sbjct: 76 VQDP--RTSPNRDVLVNLGNVLPEGFAQYARVVEVVSQADEDDRKRARERWRGYAALGYD 133 Query: 141 L 141 + Sbjct: 134 I 134 >UniRef50_Q5NXM0 DNA polymerase III, chi subunit n=2 Tax=Rhodocyclaceae RepID=Q5NXM0_AZOSE Length = 145 Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 13/119 (10%) Query: 24 LVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVEIA 83 L CE+AA + SG+RV + A LD+ LW+ FVPH +A PV I Sbjct: 16 LACELAARAYASGRRVAVRVPGPAAARELDQLLWSFEPLLFVPHVMADAPLAARTPVVIG 75 Query: 84 -------WPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYEDSLKQLARERYKAYR 135 WP ++L +L F +V+ V +++K AR R+ Y+ Sbjct: 76 DAARTTRWPHA------ELLFNLADDIPPDFERFRMLVEIVGQSEAMKIPARARWAHYK 128 >UniRef50_C5TNX8 DNA polymerase III chi subunit n=8 Tax=Neisseriaceae RepID=C5TNX8_NEIFL Length = 146 Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust. Identities = 42/147 (28%), Positives = 69/147 (46%), Gaps = 16/147 (10%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M ATFY T V +A C + R G ++L+ + +LD LW + Sbjct: 1 MPKATFY-----THVAQPAA---FACRLITRAIRDGGQILVWSDSAAAVQQLDVDLWQQI 52 Query: 61 AESFVPHN--LAGEGPRGGAPVEIAWPQKRSSSRRDI-LISLRTSFADFATAF-TEVVDF 116 ESF+PH L + PV +A+ + +D +++L F A A +++ Sbjct: 53 PESFIPHEVWLPTDPMPSETPVLLAFGNALPNIPQDCTVLNLSADFWSQAPAIPNRILEI 112 Query: 117 VPYEDSLKQL--ARERYKAYRVAGFNL 141 V +SL+ L AR+R++AYR +GF + Sbjct: 113 V--GNSLEDLAEARDRFRAYRQSGFEI 137 >UniRef50_B4RJ23 HolC n=19 Tax=Neisseria RepID=B4RJ23_NEIG2 Length = 166 Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust. Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 16/147 (10%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M TFY T VD + C + A R G R+L+ + + LD+ LW Sbjct: 21 MPKVTFY-----THVD---QIPLFTCRLIARAIRDGGRILVWSDSFGRLQELDKMLWQYE 72 Query: 61 AESFVPHNL--AGEGPRGGAPVEIAWPQKRSSSRRDI-LISLRTSFADFATAF-TEVVDF 116 AESF+PH + E V +A + +++L F + A+ V++ Sbjct: 73 AESFIPHEIWETEEAMPSDTSVLLACGGNLPRIPEGMAVLNLSDGFWNTASVLPARVLEI 132 Query: 117 VPYEDSLKQL--ARERYKAYRVAGFNL 141 V +SL+ L ARER+ AYR +GF + Sbjct: 133 V--GNSLEDLADARERFTAYRRSGFAI 157 >UniRef50_A1VP98 DNA polymerase III, chi subunit n=39 Tax=Burkholderiales RepID=A1VP98_POLNA Length = 146 Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 48/119 (40%), Gaps = 4/119 (3%) Query: 26 CEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPH--NLAGEGPRGGAPVEIA 83 C + + + SG V + E E A LD LW+ A FVPH A G PV +A Sbjct: 18 CRLLRKAYLSGATVAVIAEPEVLA-ELDALLWSFSATEFVPHCTGAASPGTLAATPVVLA 76 Query: 84 WPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNLN 142 RDIL++L F +++ V R+R+K Y G+ L Sbjct: 77 -ASPADCPGRDILVNLGQGVPGGFEGFERLIEVVSIHPEDVPAGRDRWKHYAARGYTLK 134 >UniRef50_A4BBY3 DNA polymerase III subunit chi n=1 Tax=Reinekea blandensis MED297 RepID=A4BBY3_9GAMM Length = 140 Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust. Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 4/123 (3%) Query: 19 SAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPRGGA 78 SA V +A + +VLIA ++ + +ALW+ +SF+ H P Sbjct: 15 SATYHYVARLANKARGKAHQVLIAVNSSEELEPVSQALWSVSPDSFLAHTNCATAP---F 71 Query: 79 PVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYEDSLKQLARERYKAYRVAG 138 P+++ ++ D+LI+L F + F V++ V + Q +R RY+ Y G Sbjct: 72 PLQLTASEE-CGDHHDVLINLCHETPTFFSRFKRVIEVVSQDPIRLQASRSRYRDYSDNG 130 Query: 139 FNL 141 + + Sbjct: 131 YPI 133 >UniRef50_A3M1A7 DNA polymerase III chi subunit n=18 Tax=Acinetobacter RepID=A3M1A7_ACIBT Length = 135 Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust. Identities = 31/142 (21%), Positives = 54/142 (38%), Gaps = 19/142 (13%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M +FYL + SA C + + ++ C D + LDE LW+ Sbjct: 1 MAKVSFYLFETSEERQVDSA-----CRLCRKILLKHSQIWWYCPDVQLQQTLDEKLWSFD 55 Query: 61 AESFVPHNL----AGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDF 116 SF+ H + A P E W ++ + + F+ +++ Sbjct: 56 PTSFIAHGVDQVDAAVCISAKQPSEQGW----------LVFNFNNHALEQVNHFSHIIEI 105 Query: 117 VPYEDSLKQLARERYKAYRVAG 138 V ++ KQ+ RE++K YR G Sbjct: 106 VENNEAAKQIGREKFKMYRRLG 127 >UniRef50_C8WFB0 DNA polymerase III chi subunit HolC n=3 Tax=Zymomonas mobilis RepID=C8WFB0_ZYMMN Length = 148 Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Query: 18 LSA-VEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPRG 76 LSA +E ++ IA + S K++L+ D++QA D+ LW SF+PH G G Sbjct: 11 LSAKLENILPRIAEKTLSSDKKLLVIVPDDQQARYWDDYLWRYEDTSFLPHGRVGGGDEA 70 Query: 77 GAPVEIA 83 PV I+ Sbjct: 71 EHPVLIS 77 >UniRef50_B3R662 DNA POLYMERASE III, CHI SUBUNIT n=14 Tax=Burkholderiales RepID=B3R662_CUPTR Length = 144 Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust. Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 4/119 (3%) Query: 25 VCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVEIAW 84 VC + + + +G++V+I + A LD LW A F+PH E P + Sbjct: 17 VCRLVRKAYGAGQKVVIHGAPAQLA-DLDARLWTFSALDFLPH-CGLESPNAAVTPILLA 74 Query: 85 PQKRSSSRRDILISL-RTSFADFATAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNLN 142 +LI+L + A FA+ F +++ V D+ ++ R+RY+ YR G+ L Sbjct: 75 ATTEGVPHHQLLINLAEEAPAQFAS-FERLIEVVGAGDAAREAGRQRYRFYRERGYPLT 132 >UniRef50_Q2G9Y6 DNA polymerase III chi subunit, HolC n=2 Tax=Sphingomonadales RepID=Q2G9Y6_NOVAD Length = 143 Score = 40.4 bits (93), Expect = 0.016, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 7/66 (10%) Query: 6 FYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFV 65 FY L +D EQ++ IA +G+R+L+ +DE Q R+ EALW R E+F+ Sbjct: 5 FYQLTSDPA-------EQVLPLIARNTLAAGERLLVVSDDEAQLRRVGEALWTRLPETFL 57 Query: 66 PHNLAG 71 + AG Sbjct: 58 ANGRAG 63 >UniRef50_A5WBH1 DNA polymerase III, chi subunit n=1 Tax=Psychrobacter sp. PRwf-1 RepID=A5WBH1_PSYWF Length = 166 Score = 40.4 bits (93), Expect = 0.019, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 8/130 (6%) Query: 21 VEQLVCEIAAERWRSGKRVLIACEDEKQAYR-LDEALWARPAESFVPHNLAGEG---PRG 76 V VC + + + L+ +D+ + + LD LW+ SFV H+ E + Sbjct: 31 VLNFVCRLTQTVLQKSEHSLVIIDDQVERLKQLDTQLWSFDPVSFVAHDFILEEAAVSQL 90 Query: 77 GAPVEIA--WPQKRSSSRRDILIS-LRTSFADFATAFTE-VVDFVPYEDSLKQLARERYK 132 APV + P+ ++ + L S A E V++ + +++ KQL R++Y+ Sbjct: 91 SAPVSLVSTLPKGFDGVILNLAATPLPLSVETTAAVLPERVLEIITPDEAGKQLGRDKYR 150 Query: 133 AYRVAGFNLN 142 AY+ GF LN Sbjct: 151 AYQQLGFELN 160 >UniRef50_C7RP73 DNA polymerase III chi subunit HolC n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RP73_9PROT Length = 141 Score = 39.3 bits (90), Expect = 0.040, Method: Compositional matrix adjust. Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 1/106 (0%) Query: 37 KRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDIL 96 K L+ D + A LD LW P F+PH + G PV IA Q + + L Sbjct: 29 KAALVYAPDAEVAAALDRHLWMHPPTGFLPHVRSDSPLAGETPVLIAS-QLDVVPQDERL 87 Query: 97 ISLRTSFADFATAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNLN 142 +L + F +++ V ++D + R+R + Y+ G+++ Sbjct: 88 FNLAAEVPPGFSRFASLIEVVGHQDEERAAGRQRARFYKDRGYDIT 133 >UniRef50_B0SWN1 DNA polymerase III chi subunit HolC n=6 Tax=Alphaproteobacteria RepID=B0SWN1_CAUSK Length = 153 Score = 39.3 bits (90), Expect = 0.044, Method: Compositional matrix adjust. Identities = 31/120 (25%), Positives = 54/120 (45%) Query: 19 SAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPRGGA 78 SA+EQ++ E+ + G R L+ D + LD LW +SF+PH L E Sbjct: 16 SALEQVLPELLEKTLGRGWRALVRGGDPARLRALDAHLWTWRDDSFLPHGLDDEPMADRQ 75 Query: 79 PVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYEDSLKQLARERYKAYRVAG 138 PV + + + + + D + ++ F ++ +LAR R+KA++ AG Sbjct: 76 PVLLTDKLDNPNGGQALFLLDGAEPGDLSGFERCILLFDGRDEEALRLARGRWKAFKGAG 135 >UniRef50_Q0G6N2 DNA polymerase III subunit chi n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G6N2_9RHIZ Length = 150 Score = 38.5 bits (88), Expect = 0.068, Method: Compositional matrix adjust. Identities = 32/143 (22%), Positives = 56/143 (39%), Gaps = 8/143 (5%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY L S +E + E+ G RV++ C E++ LD LW Sbjct: 1 MAEVLFYHLTE-------SRLEDALPELLQRSLARGWRVVVQCTSEERRDSLDNVLWTFS 53 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSF-ADFATAFTEVVDFVPY 119 ESF+PH E P+ + + +++ D+ + + D V F + Sbjct: 54 EESFLPHGTDAEAHPESQPILLTTRADQFANKPDVRFMVDGATPGDLTGYIRGVYMFDAF 113 Query: 120 EDSLKQLARERYKAYRVAGFNLN 142 + ARE+++ + AG + Sbjct: 114 DTDQMAHAREQWQVEKSAGHEVT 136 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P28905 DNA polymerase III subunit chi n=172 Tax=Gammapr... 205 4e-52 UniRef50_Q0HXF4 DNA polymerase III chi subunit, HolC n=9 Tax=She... 188 4e-47 UniRef50_B5F9Q5 DNA polymerase III subunit chi n=6 Tax=Gammaprot... 186 1e-46 UniRef50_Q3JEC9 DNA polymerase III chi subunit, HolC n=2 Tax=Nit... 181 5e-45 UniRef50_Q15PX3 DNA polymerase III, chi subunit n=1 Tax=Pseudoal... 179 2e-44 UniRef50_A1RHG9 DNA polymerase III chi subunit, HolC n=12 Tax=Sh... 179 2e-44 UniRef50_Q1LTH9 DNA polymerase III, chi subunit n=1 Tax=Baumanni... 179 2e-44 UniRef50_C0N7W1 DNA polymerase III, chi subunit superfamily n=1 ... 175 3e-43 UniRef50_A1SRZ0 DNA polymerase III chi subunit, HolC n=2 Tax=Psy... 172 3e-42 UniRef50_A0YCI5 DNA polymerase III subunit chi n=1 Tax=marine ga... 172 3e-42 UniRef50_B8GTX7 DNA polymerase III chi subunit HolC n=1 Tax=Thio... 171 8e-42 UniRef50_Q1N2A3 DNA polymerase III chi subunit, HolC n=1 Tax=Ber... 170 1e-41 UniRef50_P43749 DNA polymerase III subunit chi n=33 Tax=Pasteure... 169 2e-41 UniRef50_B3PDI9 DNA polymerase III, chi subunit n=1 Tax=Cellvibr... 169 3e-41 UniRef50_C3NVA1 DNA polymerase III chi subunit n=40 Tax=Vibrio R... 169 3e-41 UniRef50_C4LA52 DNA polymerase III chi subunit HolC n=1 Tax=Tolu... 168 4e-41 UniRef50_Q0VSA6 DNA polymerase III, chi subunit n=2 Tax=Alcanivo... 167 1e-40 UniRef50_O68823 DNA polymerase III subunit chi n=20 Tax=Pseudomo... 166 2e-40 UniRef50_Q1QTE2 DNA polymerase III chi subunit, HolC n=1 Tax=Chr... 166 3e-40 UniRef50_A7C6F2 DNA polymerase III chi subunit, HolC n=1 Tax=Beg... 165 4e-40 UniRef50_Q7R6X2 Cytosol aminopeptidase (Fragment) n=3 Tax=cellul... 164 5e-40 UniRef50_A4A3Y4 DNA polymerase III chi subunit, HolC n=5 Tax=unc... 163 2e-39 UniRef50_Q488M5 DNA polymerase III, chi subunit n=1 Tax=Colwelli... 162 3e-39 UniRef50_C7R5R1 DNA polymerase III chi subunit HolC n=1 Tax=Kang... 162 4e-39 UniRef50_Q5ZS87 DNA polymerase III, chi subunit n=6 Tax=Legionel... 161 4e-39 UniRef50_Q7MHG2 DNA polymerase III, chi subunit n=15 Tax=Vibrion... 161 6e-39 UniRef50_A4SSA6 DNA polymerase III, chi subunit n=2 Tax=Aeromona... 161 9e-39 UniRef50_Q3II74 DNA polymerase III, chi subunit n=3 Tax=Alteromo... 158 4e-38 UniRef50_Q7VQT1 DNA polymerase III, chi subunit n=2 Tax=Candidat... 158 5e-38 UniRef50_C5S9R7 DNA polymerase III chi subunit HolC n=1 Tax=Allo... 158 6e-38 UniRef50_Q5QY16 DNA polymerase III chi subunit n=2 Tax=Idiomarin... 157 1e-37 UniRef50_B9ZL66 DNA polymerase III chi subunit HolC n=1 Tax=Thio... 156 1e-37 UniRef50_Q2BIS6 DNA polymerase III chi subunit, HolC n=1 Tax=Nep... 156 3e-37 UniRef50_Q2SKR1 DNA polymerase III, chi subunit n=1 Tax=Hahella ... 154 8e-37 UniRef50_C5V3L7 DNA polymerase III chi subunit HolC n=2 Tax=Gall... 154 8e-37 UniRef50_B4RWP0 DNA polymerase III chi subunit n=1 Tax=Alteromon... 153 2e-36 UniRef50_A4VNZ8 DNA polymerase III, chi subunit n=2 Tax=Pseudomo... 152 3e-36 UniRef50_Q1YRR0 DNA polymerase III, chi subunit n=1 Tax=gamma pr... 151 6e-36 UniRef50_Q21KZ6 DNA polymerase III chi subunit, HolC n=2 Tax=Alt... 151 8e-36 UniRef50_Q3SL84 Putative DNA polymerase III chi subunit n=1 Tax=... 150 2e-35 UniRef50_UPI0000E0E595 DNA polymerase III subunit chi n=1 Tax=Rh... 150 2e-35 UniRef50_Q0AIF4 DNA polymerase III, chi subunit n=3 Tax=Nitrosom... 148 6e-35 UniRef50_Q1H4U3 DNA polymerase III, chi subunit n=2 Tax=Methylop... 147 1e-34 UniRef50_A4BLM8 DNA polymerase III subunit chi n=1 Tax=Nitrococc... 144 1e-33 UniRef50_A1WUV2 DNA polymerase III chi subunit, HolC n=1 Tax=Hal... 143 1e-33 UniRef50_A9IIK0 DNA polymerase III, chi subunit n=5 Tax=Bordetel... 139 2e-32 UniRef50_A8PP43 DNA polymerase III, chi subunit n=1 Tax=Ricketts... 138 4e-32 UniRef50_A5EVT2 DNA polymerase III chi subunit n=1 Tax=Dicheloba... 138 6e-32 UniRef50_C6MGG5 DNA polymerase III chi subunit HolC n=1 Tax=Nitr... 136 2e-31 UniRef50_Q3BP99 DNA polymerase III holoenzyme chi subunit n=25 T... 134 1e-30 UniRef50_C3X5D7 DNA polymerase III chi subunit n=2 Tax=Oxalobact... 133 1e-30 UniRef50_Q5NXM0 DNA polymerase III, chi subunit n=2 Tax=Rhodocyc... 131 5e-30 UniRef50_C4KAG2 DNA polymerase III chi subunit HolC n=1 Tax=Thau... 130 1e-29 UniRef50_Q0AB76 DNA polymerase III chi subunit, HolC n=1 Tax=Alk... 127 9e-29 UniRef50_C6WT44 DNA polymerase III chi subunit HolC n=1 Tax=Meth... 126 2e-28 UniRef50_A0LB28 DNA polymerase III, chi subunit n=1 Tax=Magnetoc... 126 2e-28 UniRef50_C5TNX8 DNA polymerase III chi subunit n=8 Tax=Neisseria... 125 4e-28 UniRef50_B4RJ23 HolC n=19 Tax=Neisseria RepID=B4RJ23_NEIG2 123 1e-27 UniRef50_B5EKZ3 DNA polymerase III chi subunit HolC n=2 Tax=Acid... 123 2e-27 UniRef50_C6NVB1 DNA polymerase III chi subunit n=1 Tax=Acidithio... 121 5e-27 UniRef50_Q31ET2 DNA polymerase III, chi subunit n=1 Tax=Thiomicr... 121 7e-27 UniRef50_C7I265 DNA polymerase III chi subunit HolC n=1 Tax=Thio... 120 2e-26 UniRef50_A1TZ87 DNA polymerase III chi subunit, HolC n=3 Tax=Mar... 116 3e-25 UniRef50_C8N9I8 DNA polymerase III, chi subunit n=1 Tax=Cardioba... 116 3e-25 UniRef50_B9MJ45 DNA polymerase III chi subunit HolC n=3 Tax=Coma... 115 5e-25 UniRef50_Q3A4B4 DNA polymerase III, chi subunit n=2 Tax=Desulfur... 113 2e-24 UniRef50_Q0EY83 DNA polymerase III subunit chi n=1 Tax=Mariprofu... 110 2e-23 UniRef50_D1R4C3 Putative uncharacterized protein n=1 Tax=Parachl... 97 2e-19 UniRef50_A0LHL4 DNA polymerase III chi subunit n=1 Tax=Syntropho... 91 1e-17 Sequences not found previously or not previously below threshold: UniRef50_B3R662 DNA POLYMERASE III, CHI SUBUNIT n=14 Tax=Burkhol... 137 9e-32 UniRef50_Q7NTZ0 DNA polymerase III, chi subunit n=2 Tax=Chromoba... 125 3e-28 UniRef50_A2SH60 DNA polymerase III, chi subunit n=1 Tax=Methylib... 124 1e-27 UniRef50_A4BBY3 DNA polymerase III subunit chi n=1 Tax=Reinekea ... 124 1e-27 UniRef50_Q47BG8 DNA polymerase III chi subunit, HolC n=1 Tax=Dec... 121 7e-27 UniRef50_C7RP73 DNA polymerase III chi subunit HolC n=1 Tax=Cand... 121 8e-27 UniRef50_A1VP98 DNA polymerase III, chi subunit n=39 Tax=Burkhol... 120 1e-26 UniRef50_C9YBH7 Putative uncharacterized protein n=1 Tax=Curviba... 114 8e-25 UniRef50_C1D7G5 HolC n=1 Tax=Laribacter hongkongensis HLHK9 RepI... 109 3e-23 UniRef50_A4SWH8 DNA polymerase III chi subunit, HolC n=18 Tax=Bu... 108 6e-23 UniRef50_C5CLU6 DNA polymerase III subunit chi n=7 Tax=Comamonad... 107 9e-23 UniRef50_B1Y7A4 DNA polymerase III chi subunit HolC n=1 Tax=Lept... 107 1e-22 UniRef50_A3M1A7 DNA polymerase III chi subunit n=18 Tax=Acinetob... 106 3e-22 UniRef50_B0SWN1 DNA polymerase III chi subunit HolC n=6 Tax=Alph... 94 8e-19 UniRef50_A5WBH1 DNA polymerase III, chi subunit n=1 Tax=Psychrob... 93 2e-18 UniRef50_D0L0I9 DNA polymerase III chi subunit HolC n=1 Tax=Halo... 93 3e-18 UniRef50_C5SNX1 DNA polymerase III chi subunit HolC n=1 Tax=Asti... 88 1e-16 UniRef50_Q2RS95 DNA polymerase III, chi subunit n=6 Tax=Alphapro... 85 8e-16 UniRef50_Q4FVP2 DNA polymerase III, chi subunit n=2 Tax=Psychrob... 84 2e-15 UniRef50_B8GVQ9 DNA polymerase III, chi subunit n=3 Tax=Caulobac... 83 3e-15 UniRef50_Q1QKW7 DNA polymerase III, chi subunit n=13 Tax=Alphapr... 82 6e-15 UniRef50_C8WFB0 DNA polymerase III chi subunit HolC n=3 Tax=Zymo... 78 7e-14 UniRef50_Q11HH6 DNA polymerase III, chi subunit n=75 Tax=Alphapr... 77 1e-13 UniRef50_UPI0000E87DA9 DNA polymerase III chi subunit, HolC n=1 ... 76 4e-13 UniRef50_Q0G6N2 DNA polymerase III subunit chi n=1 Tax=Fulvimari... 76 4e-13 UniRef50_C8PWW7 DNA polymerase III, chi subunit n=1 Tax=Enhydrob... 75 5e-13 UniRef50_D2LDM3 DNA polymerase III chi subunit HolC n=1 Tax=Rhod... 75 6e-13 UniRef50_B9KSS8 DNA polymerase III chi subunit n=39 Tax=Rhodobac... 71 2e-11 UniRef50_Q0BNV1 DNA-directed DNA polymerase n=19 Tax=Francisella... 70 2e-11 UniRef50_Q1GS99 DNA polymerase III chi subunit, HolC n=2 Tax=Sph... 69 4e-11 UniRef50_A3JPE3 DNA polymerase III subunit chi n=1 Tax=Rhodobact... 68 8e-11 UniRef50_B6BVC9 Putative uncharacterized protein n=1 Tax=beta pr... 68 8e-11 UniRef50_C6XKP3 DNA polymerase III chi subunit HolC n=1 Tax=Hirs... 68 1e-10 UniRef50_A3UJ95 DNA polymerase III subunit chi n=1 Tax=Oceanicau... 68 1e-10 UniRef50_Q6MCC4 Putative uncharacterized protein n=1 Tax=Candida... 66 5e-10 UniRef50_B3CTW6 DNA polymerase III chi subunit HolC n=2 Tax=Orie... 63 3e-09 UniRef50_C6XHX1 DNA polymerase III subunit chi n=1 Tax=Candidatu... 62 6e-09 UniRef50_Q0BZX6 Putative DNA polymerase III chi subunit n=1 Tax=... 62 6e-09 UniRef50_C6ACN2 DNA polymerase III subunit chi n=3 Tax=Bartonell... 62 7e-09 UniRef50_Q2G9Y6 DNA polymerase III chi subunit, HolC n=2 Tax=Sph... 62 7e-09 UniRef50_Q9ZC94 Uncharacterized protein RP872 n=16 Tax=Rickettsi... 59 4e-08 UniRef50_A5PC15 DNA polymerase III chi subunit n=1 Tax=Erythroba... 57 2e-07 UniRef50_Q6G047 Putative uncharacterized protein n=1 Tax=Bartone... 57 2e-07 UniRef50_B2IFT8 DNA polymerase III chi subunit HolC n=2 Tax=Beij... 56 3e-07 UniRef50_A3VUH0 DNA polymerase III subunit chi n=1 Tax=Parvularc... 56 5e-07 UniRef50_Q2N8X5 DNA polymerase III chi subunit n=1 Tax=Erythroba... 49 4e-05 UniRef50_A5G173 DNA polymerase III chi subunit, HolC n=13 Tax=Rh... 49 5e-05 >UniRef50_P28905 DNA polymerase III subunit chi n=172 Tax=Gammaproteobacteria RepID=HOLC_ECOLI Length = 147 Score = 205 bits (522), Expect = 4e-52, Method: Composition-based stats. Identities = 147/147 (100%), Positives = 147/147 (100%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP Sbjct: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE Sbjct: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 Query: 121 DSLKQLARERYKAYRVAGFNLNTATWK 147 DSLKQLARERYKAYRVAGFNLNTATWK Sbjct: 121 DSLKQLARERYKAYRVAGFNLNTATWK 147 >UniRef50_Q0HXF4 DNA polymerase III chi subunit, HolC n=9 Tax=Shewanella RepID=Q0HXF4_SHESR Length = 154 Score = 188 bits (479), Expect = 4e-47, Method: Composition-based stats. Identities = 58/146 (39%), Positives = 81/146 (55%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M A FYLL LS + QL C +A + + + ++V I C+D+ A+ +DE LW Sbjct: 1 MTQALFYLLPPMGVNTALSDMYQLACRLAQQGFINQQQVYIHCQDKNIAFEIDELLWQFE 60 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 +FVPHNL GEGP G+PVEI + + + R +LI+L FA F ++ DFV + Sbjct: 61 PSAFVPHNLKGEGPTTGSPVEIGFDRLGPNKSRQLLINLADQVPPFAVNFGQIFDFVAND 120 Query: 121 DSLKQLARERYKAYRVAGFNLNTATW 146 D K +ARERY+ YR G L T Sbjct: 121 DQHKAIARERYRQYRGLGIELTTQNL 146 >UniRef50_B5F9Q5 DNA polymerase III subunit chi n=6 Tax=Gammaproteobacteria RepID=B5F9Q5_VIBFM Length = 147 Score = 186 bits (474), Expect = 1e-46, Method: Composition-based stats. Identities = 65/147 (44%), Positives = 86/147 (58%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M A FY+L+ + + VC++A + RV + +D++QA +DEALW Sbjct: 1 MSQALFYVLEPTSPAATTDGQLKFVCQLAHYYYSQNARVYVLAQDKEQALLIDEALWQYD 60 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 F PHNL GEGP+ G+P+EI W RSS RR +LI+L A FA +F +VVDFVP E Sbjct: 61 VSEFTPHNLVGEGPKSGSPIEIGWGTLRSSGRRHVLINLAQEVASFAVSFAQVVDFVPCE 120 Query: 121 DSLKQLARERYKAYRVAGFNLNTATWK 147 + KQ ARERYK YR AG + T K Sbjct: 121 EKSKQQARERYKIYRNAGRAMQTEILK 147 >UniRef50_Q3JEC9 DNA polymerase III chi subunit, HolC n=2 Tax=Nitrosococcus oceani RepID=Q3JEC9_NITOC Length = 143 Score = 181 bits (461), Expect = 5e-45, Method: Composition-based stats. Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 5/146 (3%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FYLL + A ++ C++ + +R G +V I ED+ QA +D+ LW Sbjct: 1 MTKVDFYLLTSRQP----QASKRFTCKLIEKVYRLGHQVYIQVEDQAQAQEMDDLLWTFR 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 SFVPH L G PV I + + + ++LI+L F + F V + + + Sbjct: 57 QGSFVPHALVNSEEATGTPVLIGYDGE-PGGKLELLINLGAEVPAFFSRFQRVAEVIGPD 115 Query: 121 DSLKQLARERYKAYRVAGFNLNTATW 146 ++ + R+RY+ YR G +L T Sbjct: 116 ETHRHAGRQRYRYYRDHGCSLETHEL 141 >UniRef50_Q15PX3 DNA polymerase III, chi subunit n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15PX3_PSEA6 Length = 156 Score = 179 bits (456), Expect = 2e-44, Method: Composition-based stats. Identities = 64/144 (44%), Positives = 88/144 (61%), Gaps = 2/144 (1%) Query: 1 MKNATFYLLDNDTTVDGLS-AVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWAR 59 M TFYLL+ + A L C++AA+ + + +R ++ C+ + QA + DE LW Sbjct: 1 MSKVTFYLLEQEAEATSQQPAHLALACQLAAQCFSNKQRCVVMCQSQAQAEQFDELLWQL 60 Query: 60 PAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPY 119 P + FVPHNL GEGP+ G PVEI W Q+ S + +LI+L + DF F+ + DFVP Sbjct: 61 PNDRFVPHNLTGEGPQAGTPVEICW-QRPSQFNKPVLINLADNMPDFHGKFSRIYDFVPA 119 Query: 120 EDSLKQLARERYKAYRVAGFNLNT 143 D+LKQ ARERYK YR AG L+T Sbjct: 120 ADALKQQARERYKHYRAAGHQLDT 143 >UniRef50_A1RHG9 DNA polymerase III chi subunit, HolC n=12 Tax=Shewanella RepID=A1RHG9_SHESW Length = 176 Score = 179 bits (456), Expect = 2e-44, Method: Composition-based stats. Identities = 56/162 (34%), Positives = 80/162 (49%), Gaps = 16/162 (9%) Query: 1 MKNATFYLLDN----------------DTTVDGLSAVEQLVCEIAAERWRSGKRVLIACE 44 M A FYL+ T L A+ C++A + + + V I C+ Sbjct: 7 MTQALFYLMPPVAQSGHIAIQSAISTVANTNAALGAMHLFACQLAQQAYIKQQLVYIHCQ 66 Query: 45 DEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFA 104 D+ A +DE LW +FVPHNL GEGP GAPVEI + + ++ R +LI++ Sbjct: 67 DKNLALEIDELLWQFEPTAFVPHNLKGEGPITGAPVEIGFDRLGANKSRQLLINIADQAP 126 Query: 105 DFATAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNLNTATW 146 FA F +++DFV +D K +ARERY+ YR G L T Sbjct: 127 PFAVNFGQIIDFVANDDQHKAVARERYRQYRDLGIELTTHNL 168 >UniRef50_Q1LTH9 DNA polymerase III, chi subunit n=1 Tax=Baumannia cicadellinicola str. Hc (Homalodisca coagulata) RepID=Q1LTH9_BAUCH Length = 154 Score = 179 bits (455), Expect = 2e-44, Method: Composition-based stats. Identities = 71/142 (50%), Positives = 94/142 (66%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 MK TFY L+ T + L A+EQL + WR+GKR+LIACE QA ++D LWA+ Sbjct: 1 MKKVTFYRLNKKTIPNWLIAMEQLAYHLVVINWRAGKRILIACESNDQAKKIDHGLWAKT 60 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 +F+PHNL GEGP+ GAPVEI WP + + + RD++I+L DF +F E++DF+P E Sbjct: 61 PTAFIPHNLVGEGPKDGAPVEICWPHQYNYTPRDLIINLLPKCTDFIFSFNEIIDFIPDE 120 Query: 121 DSLKQLARERYKAYRVAGFNLN 142 + KQLAR RYKAYR GF L Sbjct: 121 EFFKQLARNRYKAYRNVGFQLT 142 >UniRef50_C0N7W1 DNA polymerase III, chi subunit superfamily n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N7W1_9GAMM Length = 142 Score = 175 bits (445), Expect = 3e-43, Method: Composition-based stats. Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 4/143 (2%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M +FY+L + + C +A + + G +V I ++ +Q+ LDEALWA Sbjct: 1 MTRVSFYILKST----QFEKRQAFACRLAEKAYHQGHQVYIHTDNAEQSAALDEALWAIR 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 ESFVPH + +PV I D+LI+L F + F V + + Sbjct: 57 PESFVPHEVINTDADNQSPVLIGHKDSTPPRLMDVLINLTEQQPLFFSQFDRVAEVIDDN 116 Query: 121 DSLKQLARERYKAYRVAGFNLNT 143 D +KQ R+R++ Y+ G+ L+T Sbjct: 117 DDVKQAGRQRFQFYKQRGYELDT 139 >UniRef50_A1SRZ0 DNA polymerase III chi subunit, HolC n=2 Tax=Psychromonas RepID=A1SRZ0_PSYIN Length = 160 Score = 172 bits (437), Expect = 3e-42, Method: Composition-based stats. Identities = 58/149 (38%), Positives = 82/149 (55%), Gaps = 4/149 (2%) Query: 1 MKNATFYLL--DNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWA 58 M FY+ + ++ +SA C IAA + K+V I + ++ A+ +DE LW Sbjct: 1 MSQVVFYVFTTEEKSSSVAISAHFAYACRIAAFFYAQNKKVFIYTDSKEDAFAVDEYLWQ 60 Query: 59 RPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVP 118 +SFVPHNL GEGP+ G PVEI+W + R ILI+L DFA F +++DFVP Sbjct: 61 FDGDSFVPHNLLGEGPKFGTPVEISW--QVPLHPRPILINLSQKTPDFAINFQKIIDFVP 118 Query: 119 YEDSLKQLARERYKAYRVAGFNLNTATWK 147 + + K AR RY YR G L+T T + Sbjct: 119 FPEPQKIAARIRYSTYRKMGLTLSTQTVE 147 >UniRef50_A0YCI5 DNA polymerase III subunit chi n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YCI5_9GAMM Length = 145 Score = 172 bits (436), Expect = 3e-42, Method: Composition-based stats. Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 7/149 (4%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY+L D++ C +A + ++ G + I D QA LDE LW+ Sbjct: 1 MTKIDFYILPYDSS----EQRHLFACRLAEKAFKLGNEIYIHGSDGDQAKALDELLWSWR 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQ--KRSSSRRDILISLRTSFADFATAFTEVVDFVP 118 SF+PH + + P+ I + + + S +LI+L +F + F V + V Sbjct: 57 NTSFIPHKI-DDNSTDEQPLHIGFGKDKQMSGDHNGLLINLSDHVPEFFSRFERVSEIVV 115 Query: 119 YEDSLKQLARERYKAYRVAGFNLNTATWK 147 + ++ + R Y+ Y+ G++L+T + Sbjct: 116 QDSAVTESTRANYRFYKNRGYHLDTHDLR 144 >UniRef50_B8GTX7 DNA polymerase III chi subunit HolC n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GTX7_THISH Length = 147 Score = 171 bits (433), Expect = 8e-42, Method: Composition-based stats. Identities = 38/146 (26%), Positives = 68/146 (46%), Gaps = 7/146 (4%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY+LD+ + C + + + G R+ + + +LD+ LW Sbjct: 1 MTRIDFYVLDDTDPGQ----RLRTACRLIGKAYGLGHRIHVHTGSRALSMQLDDLLWTFR 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 SF+PH + GE PV+I Q+ ++ DIL++L T F + F V + V + Sbjct: 57 DVSFIPHQVEGED--AECPVQICHDQEPQNAG-DILVNLDTQVPLFFSRFERVAEIVNQD 113 Query: 121 DSLKQLARERYKAYRVAGFNLNTATW 146 +++ RERY+ Y+ G++L+ Sbjct: 114 PAIRDAGRERYRFYKDRGYDLSHHRL 139 >UniRef50_Q1N2A3 DNA polymerase III chi subunit, HolC n=1 Tax=Bermanella marisrubri RepID=Q1N2A3_9GAMM Length = 142 Score = 170 bits (431), Expect = 1e-41, Method: Composition-based stats. Identities = 43/142 (30%), Positives = 73/142 (51%), Gaps = 6/142 (4%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M + FY+L + LS C +A + ++ G+++ + +DE+QA +LD+ +W Sbjct: 1 MTSIDFYILGHSQQQARLS----FACRLAEKAFKEGRQIYVHAQDEQQAKQLDDLMWEYK 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 ESF+PH + GE VEI W Q S D+LI+L + F + F V++ V + Sbjct: 57 PESFLPHQIVGEQ-ASQTQVEIGW-QDHPSHHFDVLINLVSPQPSFFSRFDRVLEIVIQD 114 Query: 121 DSLKQLARERYKAYRVAGFNLN 142 ++ +R YK YR G+ + Sbjct: 115 ETSLAQSRAHYKFYRDRGYEVT 136 >UniRef50_P43749 DNA polymerase III subunit chi n=33 Tax=Pasteurellaceae RepID=HOLC_HAEIN Length = 144 Score = 169 bits (430), Expect = 2e-41, Method: Composition-based stats. Identities = 71/143 (49%), Positives = 98/143 (68%), Gaps = 4/143 (2%) Query: 2 KNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPA 61 K A FY+L + T+ VE++ C +AA WRSGK+VLI+CE E QA +DE LW R Sbjct: 3 KTAQFYILTENCTLT----VEEIACNLAASIWRSGKKVLISCESEAQALEIDERLWQRDP 58 Query: 62 ESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYED 121 FVPHNL+GE + P+EI+W KR+ RRD+LI+L+ DF+ +FT+++DFVP +D Sbjct: 59 NEFVPHNLSGEATQYPTPIEISWLGKRNLQRRDLLINLQQEIPDFSHSFTQIIDFVPKDD 118 Query: 122 SLKQLARERYKAYRVAGFNLNTA 144 +LK ARERYK R+ G+NL+T Sbjct: 119 ALKTQARERYKQLRLQGWNLSTE 141 >UniRef50_B3PDI9 DNA polymerase III, chi subunit n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PDI9_CELJU Length = 139 Score = 169 bits (428), Expect = 3e-41, Method: Composition-based stats. Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 7/146 (4%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY+L T+ A C + + R G +L+A ++ +QA DE LW Sbjct: 1 MTQVDFYVLPETTS----EARWLFACRLIEKVQRMGMDILVAVDNPEQAREFDELLWTFK 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 ESF+PH L + APV+I + Q+ S + + +L++L + + F + + V E Sbjct: 57 PESFIPHQLL--DIQQPAPVQITYNQE-SGNHQGLLLNLSSGIPPYFDRFARLSEIVIQE 113 Query: 121 DSLKQLARERYKAYRVAGFNLNTATW 146 + + +RER+ Y+ G+ + T Sbjct: 114 EKALKTSRERFSFYKGRGYPIETRKL 139 >UniRef50_C3NVA1 DNA polymerase III chi subunit n=40 Tax=Vibrio RepID=C3NVA1_VIBCJ Length = 154 Score = 169 bits (428), Expect = 3e-41, Method: Composition-based stats. Identities = 59/147 (40%), Positives = 79/147 (53%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M ATFYL+ D+ + Q V + G R+ + C+D+ A +L E W Sbjct: 6 MPTATFYLISRDSAQATPEGLAQYVLYLTRHFAAQGARIYLQCQDKPHAEQLAERFWQIE 65 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 E F+ HNL GEGP+ G +EI + S R + I+L + FA FTEVVDFVP Sbjct: 66 PEQFLAHNLVGEGPKSGTAIEIGYVGVSPSWNRQLAINLADNQTTFARTFTEVVDFVPCA 125 Query: 121 DSLKQLARERYKAYRVAGFNLNTATWK 147 ++ KQLARERYK YR AG+ L T + Sbjct: 126 ENAKQLARERYKLYRQAGYQLQTVEIQ 152 >UniRef50_C4LA52 DNA polymerase III chi subunit HolC n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LA52_TOLAT Length = 159 Score = 168 bits (427), Expect = 4e-41, Method: Composition-based stats. Identities = 57/149 (38%), Positives = 80/149 (53%), Gaps = 7/149 (4%) Query: 1 MKNATFYLLDNDTTVDGL-----SAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEA 55 M TFYLL ++ + + V L C++ ER+R + + + + + QA +LDE Sbjct: 7 MPQVTFYLLPDEASPTQICDGLSHVVAVLACQLTTERFRQNQTLFLLTQTQVQAEQLDEM 66 Query: 56 LWARPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVD 115 LW + SFVPH L+ E APVEI + S R +LI+L FA F +++D Sbjct: 67 LWQQDPHSFVPHGLSDEATVTQAPVEIGTGMPKRS--RQVLINLADGIPAFAGRFAQIID 124 Query: 116 FVPYEDSLKQLARERYKAYRVAGFNLNTA 144 FVP ++ KQ ARERYK YR GF L T Sbjct: 125 FVPADEIQKQQARERYKQYRALGFTLETV 153 >UniRef50_Q0VSA6 DNA polymerase III, chi subunit n=2 Tax=Alcanivorax RepID=Q0VSA6_ALCBS Length = 148 Score = 167 bits (423), Expect = 1e-40, Method: Composition-based stats. Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 8/146 (5%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M TFYL ++ G + L IA + + G++V + C++E A +LD W P Sbjct: 10 MTEVTFYL----SSKVGEGVRQALAWRIADKALKQGRQVYVHCQNEAHARQLDAQFWQSP 65 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 F+PH L+ EG APV + + + D+LI+L DF++ F V + + + Sbjct: 66 PTGFLPHALSSEG---QAPVLLGFGDD-PGHQHDVLINLSDGVPDFSSRFQRVAEMISGD 121 Query: 121 DSLKQLARERYKAYRVAGFNLNTATW 146 ++ +Q RER++ YR GF + T Sbjct: 122 EAERQQGRERFRFYRDRGFPVTTHEL 147 >UniRef50_O68823 DNA polymerase III subunit chi n=20 Tax=Pseudomonadaceae RepID=HOLC_PSEAE Length = 142 Score = 166 bits (420), Expect = 2e-40, Method: Composition-based stats. Identities = 47/146 (32%), Positives = 74/146 (50%), Gaps = 7/146 (4%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY++ + SA Q+ C +A + WR G +V + C DE Q LD LW+ Sbjct: 1 MTRVDFYVIPSADP----SARLQVACRLAEKAWRQGMQVYLHCADEAQRSELDGRLWSFR 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 E+F+PH+LA E APV + + + RD+LI+L F F+ V + V E Sbjct: 57 GEAFIPHSLAEED--AEAPVALGLGEP-PGNHRDLLINLTLEAPGFVPNFSRVAELVVEE 113 Query: 121 DSLKQLARERYKAYRVAGFNLNTATW 146 +++Q AR++++ YR G+ L Sbjct: 114 PAIRQAARDKFRFYREQGYPLQDHRL 139 >UniRef50_Q1QTE2 DNA polymerase III chi subunit, HolC n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QTE2_CHRSD Length = 150 Score = 166 bits (420), Expect = 3e-40, Method: Composition-based stats. Identities = 36/146 (24%), Positives = 62/146 (42%), Gaps = 5/146 (3%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY+L + T L A C +A R G R+ I EDE A LDE LW Sbjct: 1 MTQVDFYILPDTT----LDARLAFACRLAETIHRKGYRLHIHTEDETMARELDERLWTFK 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 ES++PH + G+ PV + W + + + +++L ++ + F V + + Sbjct: 57 PESYLPHAVLGDDVSPEPPVTLGW-EAPPAPGVEAMLNLHPEIPEWFSRFERVAEIINQH 115 Query: 121 DSLKQLARERYKAYRVAGFNLNTATW 146 + R ++ Y+ G+ + Sbjct: 116 QDVLTAKRACWQTYKKRGYPVKANDL 141 >UniRef50_A7C6F2 DNA polymerase III chi subunit, HolC n=1 Tax=Beggiatoa sp. PS RepID=A7C6F2_9GAMM Length = 143 Score = 165 bits (419), Expect = 4e-40, Method: Composition-based stats. Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 5/144 (3%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY+L A ++ C++ + W G R+ I QA +LD LW Sbjct: 1 MPQIDFYILHTQNRY----AKDRFTCQLTDKAWHQGYRIYIQTTSLAQAQQLDNFLWVFK 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 ESF+PH++ E AP+ I + + D+LI+L + F +F + + V Sbjct: 57 EESFLPHDIYPEMSESLAPIRIGYSAQVCEG-MDVLINLTETVPPFFESFQRIAEIVNDT 115 Query: 121 DSLKQLARERYKAYRVAGFNLNTA 144 KQ R RY+ YR + L T Sbjct: 116 PYAKQAGRTRYRFYRDKAYVLKTH 139 >UniRef50_Q7R6X2 Cytosol aminopeptidase (Fragment) n=3 Tax=cellular organisms RepID=Q7R6X2_PLAYO Length = 612 Score = 164 bits (417), Expect = 5e-40, Method: Composition-based stats. Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 7/141 (4%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FYLL ++ C + + +R G V + + + +A +LD+ LW Sbjct: 478 MTRVDFYLLPAG------ESLLSYACRLTEKAYRQGHTVFLVTDTDDEAAQLDDMLWTFR 531 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 SFVPH A G P +A ++ D++I+L ++ + F V++ V + Sbjct: 532 QGSFVPHR-AVTGHTAAGPCPVAVGREPPVGFDDVMINLGSAVPEAFRRFRRVIELVGPD 590 Query: 121 DSLKQLARERYKAYRVAGFNL 141 D+ + L RE ++ YR G N Sbjct: 591 DAARALKREHFRHYRSEGLNP 611 >UniRef50_A4A3Y4 DNA polymerase III chi subunit, HolC n=5 Tax=unclassified Gammaproteobacteria RepID=A4A3Y4_9GAMM Length = 142 Score = 163 bits (413), Expect = 2e-39, Method: Composition-based stats. Identities = 44/146 (30%), Positives = 67/146 (45%), Gaps = 7/146 (4%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY+++N T S+ +L + + + G RV I E+E QA LDE LW Sbjct: 1 MTRVGFYIVENTDT----SSRTRLALRLTEKAHKQGHRVFINSENEAQARELDELLWTFR 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 SF+PH L + + I W Q+ + D+LI+L+ S DF F V + V E Sbjct: 57 PASFLPHALCSDDSSEQ--ICIGWGQE-PAGHDDLLINLQLSVPDFIGRFQRVAELVNQE 113 Query: 121 DSLKQLARERYKAYRVAGFNLNTATW 146 + + R ++ YR G+ L Sbjct: 114 PARLEALRHSWRHYRERGYALEEHRL 139 >UniRef50_Q488M5 DNA polymerase III, chi subunit n=1 Tax=Colwellia psychrerythraea 34H RepID=Q488M5_COLP3 Length = 157 Score = 162 bits (411), Expect = 3e-39, Method: Composition-based stats. Identities = 59/146 (40%), Positives = 86/146 (58%), Gaps = 5/146 (3%) Query: 2 KNATFYLLDNDTTVDGLSAVEQL---VCEIAAERWRSGKRVLIACEDEKQAYRLDEALWA 58 FYLL +D T + C A+ +R +RV I +D++ A ++DE LWA Sbjct: 4 TQVMFYLLKDDVTDEKEEDTRSAIYHACLQASHFYRQNQRVYIYAKDQQHAEQIDEMLWA 63 Query: 59 RPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVP 118 ++SFVPHNL GEGP+ GA VEI + + RR +LI+L ++ +FA F +VDFVP Sbjct: 64 FDSDSFVPHNLVGEGPKQGAMVEIGY--QAPQGRRPVLINLNSAVPNFANQFQFIVDFVP 121 Query: 119 YEDSLKQLARERYKAYRVAGFNLNTA 144 +++LKQ ARER+K R GF ++ Sbjct: 122 SDETLKQQARERFKTCRQWGFQVDNQ 147 >UniRef50_C7R5R1 DNA polymerase III chi subunit HolC n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R5R1_KANKD Length = 142 Score = 162 bits (410), Expect = 4e-39, Method: Composition-based stats. Identities = 53/142 (37%), Positives = 76/142 (53%), Gaps = 4/142 (2%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M F++L++ G A +LV + ++ G++V I DEKQA+ +DE LWA Sbjct: 1 MTQVEFHILESQP---GEEAYLRLVGQCVKSLYKQGRKVYIHAHDEKQAHAVDEYLWALD 57 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 F+PHN+ GEGP PV+I + Q + D LI+L F + F + + VP E Sbjct: 58 LNEFIPHNMVGEGPAKAPPVQIGFNQP-PEEQHDCLINLSRDVQPFFSYFLKCYEIVPNE 116 Query: 121 DSLKQLARERYKAYRVAGFNLN 142 D K+ ARERYK YR G+ L Sbjct: 117 DEHKESARERYKYYRGHGYPLQ 138 >UniRef50_Q5ZS87 DNA polymerase III, chi subunit n=6 Tax=Legionella RepID=Q5ZS87_LEGPH Length = 144 Score = 161 bits (409), Expect = 4e-39, Method: Composition-based stats. Identities = 48/145 (33%), Positives = 76/145 (52%), Gaps = 5/145 (3%) Query: 3 NATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAE 62 FYLL + + + C + + + G + + C++++QA LDE LW + Sbjct: 5 RVDFYLLASSLP----ESRWLVACRLIEKAYTKGHTIFVFCDNQQQAEYLDELLWTFKDD 60 Query: 63 SFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYEDS 122 SF+PHNL GEGP PV+I + QK DIL++L T+ F T F V++ V + Sbjct: 61 SFIPHNLQGEGPEPPPPVQIGY-QKEPRGFTDILLNLSTNIPIFYTRFKRVIELVSNVEH 119 Query: 123 LKQLARERYKAYRVAGFNLNTATWK 147 K+++R YK YR G L+T + + Sbjct: 120 EKEVSRLHYKEYRHKGCELHTHSIE 144 >UniRef50_Q7MHG2 DNA polymerase III, chi subunit n=15 Tax=Vibrionales RepID=Q7MHG2_VIBVY Length = 149 Score = 161 bits (408), Expect = 6e-39, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 76/147 (51%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M+ ATFY++ T V +A + G +V + E ++ A ++ E W Sbjct: 1 MQRATFYIVREHTPQATPEGFAHYVVFLAHHFAKQGAKVYLNGESKRHAEQIAEYFWQVE 60 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 FV HNL GEGP+ +EI + S R ++I+L + FA F EVVDFVP E Sbjct: 61 PAQFVAHNLVGEGPKYATNIEIGHEGVKPSWNRQLVINLAKNETTFANKFAEVVDFVPCE 120 Query: 121 DSLKQLARERYKAYRVAGFNLNTATWK 147 + KQLARERYK YR AG+ L T + Sbjct: 121 EKAKQLARERYKIYRQAGYQLQTIEIE 147 >UniRef50_A4SSA6 DNA polymerase III, chi subunit n=2 Tax=Aeromonas RepID=A4SSA6_AERS4 Length = 177 Score = 161 bits (407), Expect = 9e-39, Method: Composition-based stats. Identities = 68/142 (47%), Positives = 83/142 (58%), Gaps = 6/142 (4%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M TFYL++ SAVE+L C++AAE W +G + + C+DE QA RLDE LW P Sbjct: 27 MSQVTFYLMNEQDDAQA-SAVERLACQLAAESWGAGH-LYLFCDDEAQALRLDELLWQLP 84 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 E FVPH L GE G APVEI + R LI+L FA F +VVDFVP + Sbjct: 85 PERFVPHQLQGE--SGQAPVEIGHQPPKRRYAR--LINLARETPLFAGHFAQVVDFVPTD 140 Query: 121 DSLKQLARERYKAYRVAGFNLN 142 ++ KQ ARERYK YR AG L Sbjct: 141 ETQKQQARERYKHYRQAGHALE 162 >UniRef50_Q3II74 DNA polymerase III, chi subunit n=3 Tax=Alteromonadales RepID=Q3II74_PSEHT Length = 148 Score = 158 bits (401), Expect = 4e-38, Method: Composition-based stats. Identities = 63/143 (44%), Positives = 84/143 (58%), Gaps = 3/143 (2%) Query: 3 NATFYLL-DNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPA 61 NA F++L D ++ L +IAA+++R G+RV I ++E A+ +DE LWA Sbjct: 4 NAQFFVLKQQDESLAKPDDHLALAAQIAADQYRLGQRVFICVDNENTAFAIDETLWAFDP 63 Query: 62 ESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYED 121 +SFVPHNL GEGP+GGAPVEI R +LI+L + DF F +V DFVP E Sbjct: 64 DSFVPHNLQGEGPKGGAPVEIGT--TPPVGNRKVLINLANNLPDFIRRFNQVFDFVPVEA 121 Query: 122 SLKQLARERYKAYRVAGFNLNTA 144 KQ ARER+K R G N+ T Sbjct: 122 VAKQAARERFKKLRQLGANITTQ 144 >UniRef50_Q7VQT1 DNA polymerase III, chi subunit n=2 Tax=Candidatus Blochmannia RepID=Q7VQT1_BLOFL Length = 153 Score = 158 bits (401), Expect = 5e-38, Method: Composition-based stats. Identities = 62/144 (43%), Positives = 84/144 (58%), Gaps = 2/144 (1%) Query: 2 KNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPA 61 K TFYLL + L+ +EQLVC + WR GK +LI C+ QA +++EALW Sbjct: 4 KQGTFYLLPFIHHKNDLNTIEQLVCHLTKIHWRLGKTILITCDTHDQAKKINEALWNFEK 63 Query: 62 ESFVPHNLAGEGPRGGAPVEIAWPQKRSSSR-RDILISLRTSFADFATAFTEVVDFVPYE 120 SF+PH L + P+ I W Q ++ R+ LI+L +F F E++DFVP E Sbjct: 64 NSFLPHGLFSKNTY-NIPITIYWSQCCYDNKYRNTLINLMQKNKNFFLNFHEIIDFVPNE 122 Query: 121 DSLKQLARERYKAYRVAGFNLNTA 144 D+LK+LAR RYK+YR GFNL T Sbjct: 123 DNLKKLARIRYKSYRSLGFNLKTT 146 >UniRef50_C5S9R7 DNA polymerase III chi subunit HolC n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S9R7_CHRVI Length = 143 Score = 158 bits (399), Expect = 6e-38, Method: Composition-based stats. Identities = 42/147 (28%), Positives = 64/147 (43%), Gaps = 5/147 (3%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY L+ D+ D L C + RVLI C D ++A LD LW Sbjct: 1 MTRVDFYSLEPDSRGDRFI----LACRLVERIRAQDLRVLILCPDREEARHLDRLLWTMR 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 ESF+PH L G P+ I+ S +L++L + F + D V + Sbjct: 57 QESFLPHGLVGTVDTDLTPILISLDGA-SEHGCPVLLNLSRALPAGLERFERLCDLVDND 115 Query: 121 DSLKQLARERYKAYRVAGFNLNTATWK 147 +++Q RER++AYR G+ + + Sbjct: 116 PAVRQAGRERFRAYRERGYEPDHHKIR 142 >UniRef50_Q5QY16 DNA polymerase III chi subunit n=2 Tax=Idiomarina RepID=Q5QY16_IDILO Length = 149 Score = 157 bits (397), Expect = 1e-37, Method: Composition-based stats. Identities = 53/148 (35%), Positives = 84/148 (56%), Gaps = 6/148 (4%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M +ATF+L+ ++ + +L+C+ A+ +R K++ + +++QA LDE LW +P Sbjct: 1 MSSATFFLMPDEAEDEQ----NRLICDKIAQLYRKHKKLRVWARNQQQAEALDELLWQQP 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRD--ILISLRTSFADFATAFTEVVDFVP 118 +++F+PHNL GEGP GAPVE WP+ + R L +L A ++ D VP Sbjct: 57 SDAFIPHNLHGEGPATGAPVEFCWPEADAVKNRPGYALFNLAEEIPVQAQQSQQLYDIVP 116 Query: 119 YEDSLKQLARERYKAYRVAGFNLNTATW 146 +D+ K+ ARERYK YR G + T Sbjct: 117 ADDNGKKTARERYKHYRARGCQMQTEPL 144 >UniRef50_B9ZL66 DNA polymerase III chi subunit HolC n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZL66_9GAMM Length = 139 Score = 156 bits (396), Expect = 1e-37, Method: Composition-based stats. Identities = 39/146 (26%), Positives = 62/146 (42%), Gaps = 7/146 (4%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M + +FYLL + A + C +A + G RV I + LDE LW Sbjct: 1 MTHVSFYLLQDPAP----EARLRFTCRLAKKASGQGHRVHIHTGSPELTRTLDEWLWTFE 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 +F+PH + + PV + S R D+LI+L ++ F V D V E Sbjct: 57 DTTFLPH--STDVRNTDVPVSL-HEAHAPSDRCDVLINLAADVPEYCGRFERVADIVGGE 113 Query: 121 DSLKQLARERYKAYRVAGFNLNTATW 146 +S ++ R RY+ ++ G+ L Sbjct: 114 ESEREAGRARYRYFKERGYPLKHHNI 139 >UniRef50_Q2BIS6 DNA polymerase III chi subunit, HolC n=1 Tax=Neptuniibacter caesariensis RepID=Q2BIS6_9GAMM Length = 146 Score = 156 bits (394), Expect = 3e-37, Method: Composition-based stats. Identities = 37/148 (25%), Positives = 72/148 (48%), Gaps = 7/148 (4%) Query: 1 MK-NATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWAR 59 M A FY+L + A + +C + + G ++ I DE++A R+D+ LW Sbjct: 1 MTSKADFYVLPSSDP----DARGRFLCRLVEKIGALGHQIYIQTPDEQEAKRIDQLLWEY 56 Query: 60 PAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPY 119 E+F+PH+L G+ + +PV+I W ++R +D+ ++L A F +++ V Sbjct: 57 RPEAFIPHHLLGDD-KISSPVQIGWNEQRP-EHKDVYVNLNLDIPQDALEFERILEVVVQ 114 Query: 120 EDSLKQLARERYKAYRVAGFNLNTATWK 147 + + R+ YK Y+ G ++ + Sbjct: 115 TEDVLTSTRKNYKTYQSNGIQIDMHDMR 142 >UniRef50_Q2SKR1 DNA polymerase III, chi subunit n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SKR1_HAHCH Length = 141 Score = 154 bits (390), Expect = 8e-37, Method: Composition-based stats. Identities = 39/147 (26%), Positives = 73/147 (49%), Gaps = 8/147 (5%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M A F+LL + ++ + +C + + +R G R+ I C+D K+ LD+ L++ Sbjct: 1 MPKADFHLLSSGD----IAQRDFYLCRLCEKIYRLGHRIYILCKDSKELEHLDDLLYSFR 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 ESF+PH++ E P PV + + + +++I+L + D A V++ V + Sbjct: 57 PESFIPHSIEPEPPSSDIPVFLCT-RLPETISTEVVINLTEAPPDKA---DRVIELVTGD 112 Query: 121 DSLKQLARERYKAYRVAGFNLNTATWK 147 + +R+ YK Y+ GF L T + Sbjct: 113 PGARAKSRKVYKLYKQLGFELQTYNIE 139 >UniRef50_C5V3L7 DNA polymerase III chi subunit HolC n=2 Tax=Gallionellaceae RepID=C5V3L7_9PROT Length = 141 Score = 154 bits (390), Expect = 8e-37, Method: Composition-based stats. Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 11/142 (7%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY G S + C+++ + + G R +I+ D LD+ LW P Sbjct: 1 MTKVDFY--------TGSSDKLRTACQLSHKAMQHGLRTVISLPDAVSCEMLDKLLWQYP 52 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 +F+PH A APV ++ ++ + D+LI+L F + F V++ + + Sbjct: 53 DTAFIPHCDASSP--DSAPVYLSLGEE-NFPHHDMLITLHNECTPFFSRFERVIEIIGTD 109 Query: 121 DSLKQLARERYKAYRVAGFNLN 142 + + RER+K YR G+ + Sbjct: 110 EDDSRRGRERFKFYRDRGYEMR 131 >UniRef50_B4RWP0 DNA polymerase III chi subunit n=1 Tax=Alteromonas macleodii 'Deep ecotype' RepID=B4RWP0_ALTMD Length = 140 Score = 153 bits (387), Expect = 2e-36, Method: Composition-based stats. Identities = 49/142 (34%), Positives = 78/142 (54%), Gaps = 6/142 (4%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY L + A E + A + + +++ + C+ + QA +DE LW P Sbjct: 1 MPQVIFYQLTSSDNGVAGRASE-----VIASAFANKQKISVLCDTQAQAEEVDELLWQLP 55 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 A+ FVPHNL GEGP+ G PVEI W + +RR +++++ + +++DFVP + Sbjct: 56 ADRFVPHNLYGEGPQSGTPVEICW-RPEQVARRQMVVNVGSGMVPSPNQHRQIIDFVPVD 114 Query: 121 DSLKQLARERYKAYRVAGFNLN 142 ++ KQ AR RYK Y+ AG N+ Sbjct: 115 ENAKQAARVRYKNYQQAGCNMQ 136 >UniRef50_A4VNZ8 DNA polymerase III, chi subunit n=2 Tax=Pseudomonas RepID=A4VNZ8_PSEU5 Length = 139 Score = 152 bits (384), Expect = 3e-36, Method: Composition-based stats. Identities = 45/142 (31%), Positives = 73/142 (51%), Gaps = 7/142 (4%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY+L +D + + C++AA+ W+ G +V + C DE Q+ RLDE LW+ Sbjct: 1 MTRIEFYVLPDDNPL----GRLRAACQLAAKGWQHGLQVFVRCSDEDQSTRLDELLWSFR 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 AE F+PH E APV I Q+ +++ +LI+L + + F+ V++ V E Sbjct: 57 AERFIPHEQYAE--EVQAPVVIGLEQEPPTAQ-GLLINLAPTLSAHIDRFSRVIEIVNQE 113 Query: 121 DSLKQLARERYKAYRVAGFNLN 142 L RE ++ YR G++ Sbjct: 114 PQLLTACRENFRLYRRQGYDPQ 135 >UniRef50_Q1YRR0 DNA polymerase III, chi subunit n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YRR0_9GAMM Length = 143 Score = 151 bits (382), Expect = 6e-36, Method: Composition-based stats. Identities = 38/146 (26%), Positives = 66/146 (45%), Gaps = 9/146 (6%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M + +FY L D L LVC++ + + ++VL D A +LD+ LW Sbjct: 1 MTSVSFYKLSGD-----LQVALALVCQLTQKAVNAKQQVLCLVPDNDTAEQLDKLLWGFQ 55 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 A +FVPH + E P+ I+ ILI+L+ + + + F V++ + E Sbjct: 56 ASAFVPHGVGIE----HLPIAISADSSDPGEHHGILINLQGAIPTWFSRFERVMEVIYPE 111 Query: 121 DSLKQLARERYKAYRVAGFNLNTATW 146 +Q R+ +K Y+ G+ L+ Sbjct: 112 PDYEQAKRDNFKFYKERGYPLSFHDL 137 >UniRef50_Q21KZ6 DNA polymerase III chi subunit, HolC n=2 Tax=Alteromonadales RepID=Q21KZ6_SACD2 Length = 149 Score = 151 bits (381), Expect = 8e-36, Method: Composition-based stats. Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 13/154 (8%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY+L + Q C +A + G +VLIA +DE + +DE LW + Sbjct: 1 MTRIDFYVLSASDDK----SRWQFACRLAEKAVSRGNKVLIATQDEAASRAVDELLWTQR 56 Query: 61 AESFVPHNLAGE--------GPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTE 112 ESFVPH++ G+ P PV I +L+++RT+ + + F Sbjct: 57 PESFVPHHIVGQNTDGQSSYAPTAKPPVVITHDLDDIDHHD-VLVNIRTTRPEQFSRFDR 115 Query: 113 VVDFVPYEDSLKQLARERYKAYRVAGFNLNTATW 146 + + V + + + R+ Y Y+ G+ + T Sbjct: 116 LAEIVIQQPEVLENTRQSYAFYKQRGYPVQTHKL 149 >UniRef50_Q3SL84 Putative DNA polymerase III chi subunit n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SL84_THIDA Length = 143 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 9/147 (6%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY D + +AA+ + GK+V+I D A +D LW P Sbjct: 1 MTEIIFYTFAED--------RLDVARRVAAKAYGQGKQVMIYAPDAAVAGAVDRMLWTTP 52 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 A FVPH + PV I + D++I+L ++ F +V+ V + Sbjct: 53 ALGFVPHARDSDALAAETPVLIG-ADAGALRHADVMINLDSAQPPAFGRFERLVEIVGTD 111 Query: 121 DSLKQLARERYKAYRVAGFNLNTATWK 147 D+ ++ R RY+ Y+ G+ L T + Sbjct: 112 DAEREQGRARYRFYQSRGYALKTHDLR 138 >UniRef50_UPI0000E0E595 DNA polymerase III subunit chi n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0E595 Length = 151 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 48/142 (33%), Positives = 74/142 (52%), Gaps = 3/142 (2%) Query: 1 MKNATFYLL-DNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWAR 59 M A FY L + D T S++ L C++ A + KR+ + C D+ QA + LW Sbjct: 1 MTQANFYQLTEQDGTGFDASSIAVLACDLVARCYGEKKRLTVLCTDQAQAEAFSDLLWQH 60 Query: 60 PAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPY 119 P E F+ HN+AGEGP GGA VE+ W + R I++++ + + DFVP Sbjct: 61 PPERFIAHNIAGEGPHGGAAVEVTWGNQSPI--RSIVVNVAALQIPNPERYHTIYDFVPV 118 Query: 120 EDSLKQLARERYKAYRVAGFNL 141 ++ K AR+RY ++ AG + Sbjct: 119 AEADKIRARQRYAFFKRAGCQM 140 >UniRef50_Q0AIF4 DNA polymerase III, chi subunit n=3 Tax=Nitrosomonadaceae RepID=Q0AIF4_NITEC Length = 142 Score = 148 bits (374), Expect = 6e-35, Method: Composition-based stats. Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 9/148 (6%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY G + + C + ++ + G + ++ D + A R D+ LW Sbjct: 1 MTQIDFY--------TGATDRLLIACRLCSKAVQQGLKTVVYIPDAELANRFDKLLWTFS 52 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRS-SSRRDILISLRTSFADFATAFTEVVDFVPY 119 SFVPH A + G PV + + + D+L++L + F VV+ V Sbjct: 53 PTSFVPHCQADDKLAGVTPVILNNQLEMPEVAYFDVLLNLDAAIPSGFEHFKRVVEIVDE 112 Query: 120 EDSLKQLARERYKAYRVAGFNLNTATWK 147 + K AR+RY+ Y+ G ++ + Sbjct: 113 IEDSKLHARKRYRRYQELGHDIRHHRLE 140 >UniRef50_Q1H4U3 DNA polymerase III, chi subunit n=2 Tax=Methylophilaceae RepID=Q1H4U3_METFK Length = 154 Score = 147 bits (371), Expect = 1e-34, Method: Composition-based stats. Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 9/143 (6%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M F+ + V +++ + G+R+++ ++ A +L LW+ P Sbjct: 1 MTRVDFF--------FNVPNKAAHVASLSSRAVQRGRRLMVLASTQQAAEQLGSFLWSSP 52 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 F+PH A PV I W + DILI+L + + F + F +++ V E Sbjct: 53 PTGFLPHCHATHPRAAETPVIIDWRHE-PLPHDDILINLDSQYPPFFSRFRRLIEIVGLE 111 Query: 121 DSLKQLARERYKAYRVAGFNLNT 143 + + ARERY+ YR G+ L T Sbjct: 112 EEDRAAARERYRFYRDRGYELRT 134 >UniRef50_A4BLM8 DNA polymerase III subunit chi n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BLM8_9GAMM Length = 144 Score = 144 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 38/145 (26%), Positives = 58/145 (40%), Gaps = 8/145 (5%) Query: 2 KNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPA 61 FY+L +A E C + + +R G RV I D+ LD LW A Sbjct: 5 PRIDFYVLTT----VAAAARELFCCRLTEKAYRQGYRVFILTGDKALTQALDLQLWTFRA 60 Query: 62 ESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYED 121 SFVPH G+ PV + ++ D+LI+L + + + + V + Sbjct: 61 GSFVPHATLGQA--DDEPVVLG--EQPPRLAVDLLINLAAHCPNHWQRLSRIAEIVTQQP 116 Query: 122 SLKQLARERYKAYRVAGFNLNTATW 146 +LARER++ YR G Sbjct: 117 ESLELARERFRCYRNDGAQPTYHRL 141 >UniRef50_A1WUV2 DNA polymerase III chi subunit, HolC n=1 Tax=Halorhodospira halophila SL1 RepID=A1WUV2_HALHL Length = 140 Score = 143 bits (362), Expect = 1e-33, Method: Composition-based stats. Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 8/143 (5%) Query: 5 TFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESF 64 FY+LD G + E+ C +A + + +G VL+ ED++Q RLD LW SF Sbjct: 2 DFYILDGP----GEAPRERFACRLAEKAYENGYGVLLLTEDDEQTERLDALLWTFRQGSF 57 Query: 65 VPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYEDSLK 124 VPH R G PV + + + +LI+L A + + V +++ Sbjct: 58 VPHATL--AARDGEPVAVGGDEHAADDA--VLINLTDRTPATWQARQRIAEVVDQREAVL 113 Query: 125 QLARERYKAYRVAGFNLNTATWK 147 + +R+RY+ Y+ AG +T + Sbjct: 114 RASRQRYRIYKEAGCEPHTHRIE 136 >UniRef50_A9IIK0 DNA polymerase III, chi subunit n=5 Tax=Bordetella RepID=A9IIK0_BORPD Length = 147 Score = 139 bits (352), Expect = 2e-32, Method: Composition-based stats. Identities = 36/148 (24%), Positives = 66/148 (44%), Gaps = 10/148 (6%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M F G + + C+ A +R+++G+R+++ C D + D LWA Sbjct: 3 MTRIDF--------AFGAADRLRAACQAARKRYQAGQRLVVYCADGARLAAFDRMLWAFD 54 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRD--ILISLRTSFADFATAFTEVVDFVP 118 SFVPH LA + PV + + ++ D L++L F V++ V Sbjct: 55 DVSFVPHVLATDPLAADTPVILTAAAPQPAAAGDEPWLLNLDDDCPPGYDGFARVLEIVS 114 Query: 119 YEDSLKQLARERYKAYRVAGFNLNTATW 146 + + +Q AR+R++ Y+ AG ++ Sbjct: 115 DDPADRQAARQRWRVYQAAGHTPHSHDL 142 >UniRef50_A8PP43 DNA polymerase III, chi subunit n=1 Tax=Rickettsiella grylli RepID=A8PP43_9COXI Length = 146 Score = 138 bits (349), Expect = 4e-32, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 59/144 (40%), Gaps = 5/144 (3%) Query: 2 KNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPA 61 FYLL+ + C + + + K++ I ++ R DE LW Sbjct: 4 TTIDFYLLNT----VFQEDRYRFSCRLIDKAFLQHKKIFIQVNTAEEGQRFDELLWTFRD 59 Query: 62 ESFVPHNLAGEGPRGGAPVEIAWPQKRSSS-RRDILISLRTSFADFATAFTEVVDFVPYE 120 SF+PH + + + DIL++L T D+ + F+ +++ V E Sbjct: 60 ISFIPHRYLEVDSSIDPLLTVHIAVNKPVELHADILLNLSTRVPDYFSTFSRIIEVVSEE 119 Query: 121 DSLKQLARERYKAYRVAGFNLNTA 144 + K +R++YK Y+ +L T Sbjct: 120 NENKNQSRQKYKFYKTQQCHLMTH 143 >UniRef50_A5EVT2 DNA polymerase III chi subunit n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EVT2_DICNV Length = 141 Score = 138 bits (348), Expect = 6e-32, Method: Composition-based stats. Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 6/140 (4%) Query: 6 FYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFV 65 FY+L++ T ++A VC + + + + + C DE A +L+ LW+ AESF+ Sbjct: 5 FYVLNSQT----IAARLHFVCRLCEKAMAARQHTAVLCADEAMAAQLNALLWSFRAESFI 60 Query: 66 PHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISL-RTSFADFATAFTEVVDFVPYEDSLK 124 PH L+ + A V + +R +++ ++ I+L D V + V ++ Sbjct: 61 PHALSDDALAAHAAVMLLIAPER-AAQTNVFINLSADELPDIPQGCQRVFEVVDQSPAVL 119 Query: 125 QLARERYKAYRVAGFNLNTA 144 + R R+K YR G T Sbjct: 120 AVTRRRFKHYRARGITPETV 139 >UniRef50_B3R662 DNA POLYMERASE III, CHI SUBUNIT n=14 Tax=Burkholderiales RepID=B3R662_CUPTR Length = 144 Score = 137 bits (346), Expect = 9e-32, Method: Composition-based stats. Identities = 32/142 (22%), Positives = 57/142 (40%), Gaps = 10/142 (7%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M F+ + V VC + + + +G++V+I Q LD LW Sbjct: 1 MTRIDFH--------SNVPDVLGYVCRLVRKAYGAGQKVVIHGA-PAQLADLDARLWTFS 51 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 A F+PH P+ +A + +LI+L +F +++ V Sbjct: 52 ALDFLPHCGLESPNAAVTPILLAATTEG-VPHHQLLINLAEEAPAQFASFERLIEVVGAG 110 Query: 121 DSLKQLARERYKAYRVAGFNLN 142 D+ ++ R+RY+ YR G+ L Sbjct: 111 DAAREAGRQRYRFYRERGYPLT 132 >UniRef50_C6MGG5 DNA polymerase III chi subunit HolC n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MGG5_9PROT Length = 159 Score = 136 bits (343), Expect = 2e-31, Method: Composition-based stats. Identities = 39/148 (26%), Positives = 60/148 (40%), Gaps = 11/148 (7%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY G + Q C + A+ + RVLI K +LD+ LW Sbjct: 14 MTQILFY--------SGSNNKLQTTCRLCAKAIQQHMRVLIYVPASKLLDQLDQLLWTFS 65 Query: 61 AESFVPHN--LAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVP 118 + SF+PH L PV ++ Q + +S D+LI+L F +++ Sbjct: 66 STSFIPHCNILDDAKLVSATPVILS-GQIQVNSPFDVLINLHDQSPHLFDQFDRLIEIAG 124 Query: 119 YEDSLKQLARERYKAYRVAGFNLNTATW 146 K ARERY+ Y+ AG+ + Sbjct: 125 TSHEDKLAARERYRFYKNAGYEIQHYHL 152 >UniRef50_Q3BP99 DNA polymerase III holoenzyme chi subunit n=25 Tax=Xanthomonadaceae RepID=Q3BP99_XANC5 Length = 141 Score = 134 bits (337), Expect = 1e-30, Method: Composition-based stats. Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 7/145 (4%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M A FYL+ L+ +LVCE+A + + LI D +QA LD+ LWA Sbjct: 1 MPRADFYLI---AKPRFLNEPLRLVCELARKANDANLPTLILARDTQQAEALDDLLWAFD 57 Query: 61 AESFVPHNLAGEGPRGG-APVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPY 119 E++VPH +AG APV IA P+ ++ R ++I+LR + A V++ VP Sbjct: 58 DEAYVPHQIAGTDEEDELAPVLIAAPEF-AAPSRPLVINLRDD--PYLGACDRVLEVVPA 114 Query: 120 EDSLKQLARERYKAYRVAGFNLNTA 144 + + ++ RER+K Y+ G L Sbjct: 115 DPAAREPLRERWKQYKALGLELTKY 139 >UniRef50_C3X5D7 DNA polymerase III chi subunit n=2 Tax=Oxalobacter formigenes RepID=C3X5D7_OXAFO Length = 141 Score = 133 bits (336), Expect = 1e-30, Method: Composition-based stats. Identities = 31/144 (21%), Positives = 56/144 (38%), Gaps = 10/144 (6%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERW--RSGKRVLIACEDEKQAYRLDEALWA 58 M F ++ C + + R++I D RLD+ALW Sbjct: 1 MTKIEF--------RTHIADKINYTCRWVRKAFLNAPDSRIVILSSDRNLLNRLDDALWT 52 Query: 59 RPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVP 118 F+PH + G+ +PV + + + IL++L + F +++ V Sbjct: 53 FSDSDFLPHAMLGDRLASRSPVLLTYDDQCEMPHHQILVNLSPAIPACYARFDRLIELVS 112 Query: 119 YEDSLKQLARERYKAYRVAGFNLN 142 E + + R+RY YR G+ L+ Sbjct: 113 TETADTEAGRQRYVHYRERGYALH 136 >UniRef50_Q5NXM0 DNA polymerase III, chi subunit n=2 Tax=Rhodocyclaceae RepID=Q5NXM0_AZOSE Length = 145 Score = 131 bits (331), Expect = 5e-30, Method: Composition-based stats. Identities = 36/143 (25%), Positives = 54/143 (37%), Gaps = 9/143 (6%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY L CE+AA + SG+RV + A LD+ LW+ Sbjct: 1 MARVQFY--------HNAENPLALACELAARAYASGRRVAVRVPGPAAARELDQLLWSFE 52 Query: 61 AESFVPHNLAGEGPRGGAPVEIAW-PQKRSSSRRDILISLRTSFADFATAFTEVVDFVPY 119 FVPH +A PV I + ++L +L F +V+ V Sbjct: 53 PLLFVPHVMADAPLAARTPVVIGDAARTTRWPHAELLFNLADDIPPDFERFRMLVEIVGQ 112 Query: 120 EDSLKQLARERYKAYRVAGFNLN 142 +++K AR R+ Y+ L Sbjct: 113 SEAMKIPARARWAHYKQRELPLQ 135 >UniRef50_C4KAG2 DNA polymerase III chi subunit HolC n=1 Tax=Thauera sp. MZ1T RepID=C4KAG2_THASP Length = 146 Score = 130 bits (328), Expect = 1e-29, Method: Composition-based stats. Identities = 41/142 (28%), Positives = 55/142 (38%), Gaps = 9/142 (6%) Query: 2 KNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPA 61 FY D L E+AA G++V + C D Q RLD+ALW Sbjct: 3 PRVQFYHNTPD--------RLALAHELAAGAHARGRKVALRCTDATQLRRLDQALWTAVP 54 Query: 62 ESFVPHNLAGEGPRGGAPVEIAW-PQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 FVPH G PV + + D+L +L A F VV+ V + Sbjct: 55 LDFVPHVGVGSALAAETPVVLGAAGEPCPWPHADMLFNLADDVPAEAEGFRMVVEIVGRD 114 Query: 121 DSLKQLARERYKAYRVAGFNLN 142 + AR R+ AYR G+ L Sbjct: 115 AAEVHAARLRWAAYRQRGYELK 136 >UniRef50_Q0AB76 DNA polymerase III chi subunit, HolC n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AB76_ALHEH Length = 146 Score = 127 bits (320), Expect = 9e-29, Method: Composition-based stats. Identities = 40/147 (27%), Positives = 59/147 (40%), Gaps = 8/147 (5%) Query: 2 KNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKR-VLIACEDEKQAYRLDEALWARP 60 FY+L+ T E+ CE+ A+ G R + I D +QA RLD LW Sbjct: 7 PLVRFYVLNRAT---DPVQRERFACELVAKGLEHGVRHIHIQVHDPQQARRLDTLLWTFR 63 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 ESF+PH + E PV I + +LI+L TAF V + V + Sbjct: 64 KESFIPHAVQAEA--EDEPVVIGDRPEPRPDA--LLINLAADIPPEWTAFGRVFEVVVQD 119 Query: 121 DSLKQLARERYKAYRVAGFNLNTATWK 147 + R ++ Y+ AG + Sbjct: 120 PEILHTTRSHFRTYQQAGVTPEKHDVR 146 >UniRef50_C6WT44 DNA polymerase III chi subunit HolC n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WT44_METML Length = 140 Score = 126 bits (318), Expect = 2e-28, Method: Composition-based stats. Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 9/144 (6%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M F+ D L+ V +L A+R +++ I +D+ + + LW Sbjct: 1 MTRVEFFF----NVPDKLAKVAELCDRAVAKR----RQLTIFTQDDVMSANVQALLWQHS 52 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 A SF+P G + + I + + DILI+L+ F + F +V+ V + Sbjct: 53 ATSFLPSAYPGSPEQDDVAI-IVDKEGTQLLQDDILINLKAEHPPFFSRFKYLVELVGAD 111 Query: 121 DSLKQLARERYKAYRVAGFNLNTA 144 D+ K LAR RYK YR G+ + + Sbjct: 112 DADKALARARYKFYRDRGYQIKST 135 >UniRef50_A0LB28 DNA polymerase III, chi subunit n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LB28_MAGSM Length = 157 Score = 126 bits (317), Expect = 2e-28, Method: Composition-based stats. Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 8/140 (5%) Query: 3 NATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAE 62 FY L D+ E+ + +I + + G RV I ED +QA LDE LW P + Sbjct: 10 RVRFYQLATDS-------RERALLKILNKVYGMGLRVCIVVEDRQQAQGLDEHLWRHPPD 62 Query: 63 SFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYEDS 122 SF+PH + + P+ I+ Q + +++ L + F VVDFVP + Sbjct: 63 SFLPHATSVDPFPEAQPILIS-EQPVDPNGATVVVMLTPVPLENLDQFDTVVDFVPDDPQ 121 Query: 123 LKQLARERYKAYRVAGFNLN 142 K+ +R RYK Y+ A + Sbjct: 122 AKRASRLRYKHYKDAQCQME 141 >UniRef50_Q7NTZ0 DNA polymerase III, chi subunit n=2 Tax=Chromobacterium group RepID=Q7NTZ0_CHRVO Length = 141 Score = 125 bits (315), Expect = 3e-28, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 53/144 (36%), Gaps = 9/144 (6%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY ++ + C +A R +R+LI + E+ LW+ Sbjct: 1 MSRIDFY--------TNVADPQAFACRLADTVQRKKERLLIWLDSERSVEVFSNRLWSFG 52 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 FVPH G PV +A S +L++L F +++ V + Sbjct: 53 DTRFVPHCRLGAPEAAETPVWLAASLPDDLSH-PVLLNLGPQLPFEFGRFERILEIVGRD 111 Query: 121 DSLKQLARERYKAYRVAGFNLNTA 144 ARER++AYR G + Sbjct: 112 PESLATARERFRAYREHGCEIEHH 135 >UniRef50_C5TNX8 DNA polymerase III chi subunit n=8 Tax=Neisseriaceae RepID=C5TNX8_NEIFL Length = 146 Score = 125 bits (315), Expect = 4e-28, Method: Composition-based stats. Identities = 39/146 (26%), Positives = 64/146 (43%), Gaps = 12/146 (8%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M ATFY T V +A C + R G ++L+ + +LD LW + Sbjct: 1 MPKATFY-----THVAQPAA---FACRLITRAIRDGGQILVWSDSAAAVQQLDVDLWQQI 52 Query: 61 AESFVPHN--LAGEGPRGGAPVEIAWPQKRSSSRRDI-LISLRTSFADFATAF-TEVVDF 116 ESF+PH L + PV +A+ + +D +++L F A A +++ Sbjct: 53 PESFIPHEVWLPTDPMPSETPVLLAFGNALPNIPQDCTVLNLSADFWSQAPAIPNRILEI 112 Query: 117 VPYEDSLKQLARERYKAYRVAGFNLN 142 V AR+R++AYR +GF + Sbjct: 113 VGNSLEDLAEARDRFRAYRQSGFEIE 138 >UniRef50_A2SH60 DNA polymerase III, chi subunit n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SH60_METPP Length = 144 Score = 124 bits (311), Expect = 1e-27, Method: Composition-based stats. Identities = 27/152 (17%), Positives = 59/152 (38%), Gaps = 14/152 (9%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M F+ G + C + + ++ G RV + ++ +LD LW Sbjct: 1 MTEINFH--------HGAADPLAHACRLLTKAYQRGARVAVTASSSERLAQLDVMLWTYD 52 Query: 61 AESFVPHNL--AGEGPR---GGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVD 115 +FVPH AG P P+ + + + ++L++L +F + + Sbjct: 53 PLAFVPHARLRAGAAPAERLAPTPIWL-LDRAADAPHHEVLVNLGPEVPAGFESFERLFE 111 Query: 116 FVPYEDSLKQLARERYKAYRVAGFNLNTATWK 147 V +D ++ R+R++ + G+ + + Sbjct: 112 IVGKDDEERRAGRQRWRYFESRGYEIRPHEVR 143 >UniRef50_A4BBY3 DNA polymerase III subunit chi n=1 Tax=Reinekea blandensis MED297 RepID=A4BBY3_9GAMM Length = 140 Score = 124 bits (311), Expect = 1e-27, Method: Composition-based stats. Identities = 33/147 (22%), Positives = 62/147 (42%), Gaps = 8/147 (5%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M F++L + SA V +A + +VLIA ++ + +ALW+ Sbjct: 1 MTKIDFHILPS----ADDSATYHYVARLANKARGKAHQVLIAVNSSEELEPVSQALWSVS 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 +SF+ H P P+++ ++ D+LI+L F + F V++ V + Sbjct: 57 PDSFLAHTNCATAPF---PLQLTASEEC-GDHHDVLINLCHETPTFFSRFKRVIEVVSQD 112 Query: 121 DSLKQLARERYKAYRVAGFNLNTATWK 147 Q +R RY+ Y G+ + + Sbjct: 113 PIRLQASRSRYRDYSDNGYPIERFDLR 139 >UniRef50_B4RJ23 HolC n=19 Tax=Neisseria RepID=B4RJ23_NEIG2 Length = 166 Score = 123 bits (310), Expect = 1e-27, Method: Composition-based stats. Identities = 37/151 (24%), Positives = 60/151 (39%), Gaps = 12/151 (7%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M TFY + + C + A R G R+L+ + + LD+ LW Sbjct: 21 MPKVTFY--------THVDQIPLFTCRLIARAIRDGGRILVWSDSFGRLQELDKMLWQYE 72 Query: 61 AESFVPHNL--AGEGPRGGAPVEIAWPQKRSSSRRDI-LISLRTSFADFATAF-TEVVDF 116 AESF+PH + E V +A + +++L F + A+ V++ Sbjct: 73 AESFIPHEIWETEEAMPSDTSVLLACGGNLPRIPEGMAVLNLSDGFWNTASVLPARVLEI 132 Query: 117 VPYEDSLKQLARERYKAYRVAGFNLNTATWK 147 V ARER+ AYR +GF + + Sbjct: 133 VGNSLEDLADARERFTAYRRSGFAIEHHGME 163 >UniRef50_B5EKZ3 DNA polymerase III chi subunit HolC n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EKZ3_ACIF5 Length = 141 Score = 123 bits (309), Expect = 2e-27, Method: Composition-based stats. Identities = 36/147 (24%), Positives = 57/147 (38%), Gaps = 7/147 (4%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M A+FY L +C + A+ W+ I C D + LD+ LW Sbjct: 1 MPVASFYTLPPTLLTAHEQRRG--MCRVIAKVWQVMGEADILCPDTEAGQTLDDLLWTFQ 58 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 A +FVPH G PV I + +++ ++DF+P Sbjct: 59 AGAFVPHARG-----AGEPVRIHENGAWPLQGKALVLCGLDKLPAPLPPCERLIDFIPVA 113 Query: 121 DSLKQLARERYKAYRVAGFNLNTATWK 147 + L+ ARERY+ + AGF + + Sbjct: 114 EQLRGFARERYRQLKNAGFTMQVHPLE 140 >UniRef50_C6NVB1 DNA polymerase III chi subunit n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NVB1_9GAMM Length = 143 Score = 121 bits (305), Expect = 5e-27, Method: Composition-based stats. Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 11/150 (7%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M +A+FY L + + VC + A+ W+ +V I C DE+ A +D+ LW Sbjct: 1 MPSASFYRLPANLLTATEQ--HRAVCRVVAKAWQVLGQVNILCRDEELAESMDDLLWTYQ 58 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRS---SSRRDILISLRTSFADFATAFTEVVDFV 117 A +F PH G PV + S + L+ LR + A ++DF+ Sbjct: 59 AGAFTPH-----GRDPQEPVCLYAGTDASVLRPAPALALVGLRELPGNLPDA-ARLLDFI 112 Query: 118 PYEDSLKQLARERYKAYRVAGFNLNTATWK 147 P ++S AR+RY+ R AG+ + T T + Sbjct: 113 PPDESGVADARQRYRILREAGYTIQTYTLE 142 >UniRef50_Q31ET2 DNA polymerase III, chi subunit n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31ET2_THICR Length = 146 Score = 121 bits (304), Expect = 7e-27, Method: Composition-based stats. Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 8/146 (5%) Query: 2 KNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPA 61 K+ FY+L DT E + ++ + R +R I E + R D +LW Sbjct: 9 KDVIFYVLGTDTAQQ----REAFMAKLVNKIHREKRRCDIRFASEDEMTRFDLSLWQYQP 64 Query: 62 ESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYED 121 E+F+PH++ AP+++ W + ++ +D+L+++ F + ++ + + Sbjct: 65 EAFIPHSVQQTV---QAPIQL-WADQIATPCQDVLLNVHPDFPQNFQLYNRTIEVLDQTE 120 Query: 122 SLKQLARERYKAYRVAGFNLNTATWK 147 L Q+ RER+KAY+ G K Sbjct: 121 HLIQMGRERWKAYKKEGLEPTVHKIK 146 >UniRef50_Q47BG8 DNA polymerase III chi subunit, HolC n=1 Tax=Dechloromonas aromatica RCB RepID=Q47BG8_DECAR Length = 140 Score = 121 bits (304), Expect = 7e-27, Method: Composition-based stats. Identities = 33/142 (23%), Positives = 58/142 (40%), Gaps = 9/142 (6%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY G S C + + + K +L+ + + A +D LW Sbjct: 1 MTEVFFY--------HGASDKIAAACALLSGAYAKKKPMLVYTLEPEVASGIDRMLWTNA 52 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 A SFVPH A P+ IA + + + L++L + F +++ V + Sbjct: 53 ALSFVPHCRADSPLAAETPILIA-DTLETIPQDERLMNLSQEIPPGFSRFHSLIEVVGQD 111 Query: 121 DSLKQLARERYKAYRVAGFNLN 142 +S + AR+R K Y+ G+ + Sbjct: 112 ESDRLAARDRVKFYKDRGYEVR 133 >UniRef50_C7RP73 DNA polymerase III chi subunit HolC n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RP73_9PROT Length = 141 Score = 121 bits (304), Expect = 8e-27, Method: Composition-based stats. Identities = 32/142 (22%), Positives = 55/142 (38%), Gaps = 9/142 (6%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY G S + + + K L+ D + A LD LW P Sbjct: 1 MTQVFFY--------HGASDRIVATATLLGKAFAQKKAALVYAPDAEVAAALDRHLWMHP 52 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 F+PH + G PV IA Q + + L +L + F +++ V ++ Sbjct: 53 PTGFLPHVRSDSPLAGETPVLIA-SQLDVVPQDERLFNLAAEVPPGFSRFASLIEVVGHQ 111 Query: 121 DSLKQLARERYKAYRVAGFNLN 142 D + R+R + Y+ G+++ Sbjct: 112 DEERAAGRQRARFYKDRGYDIT 133 >UniRef50_A1VP98 DNA polymerase III, chi subunit n=39 Tax=Burkholderiales RepID=A1VP98_POLNA Length = 146 Score = 120 bits (302), Expect = 1e-26, Method: Composition-based stats. Identities = 36/148 (24%), Positives = 52/148 (35%), Gaps = 12/148 (8%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M F+ + C + + + SG V + E E A LD LW+ Sbjct: 1 MTEIAFH--------FNVPDKLAYGCRLLRKAYLSGATVAVIAEPEVLAE-LDALLWSFS 51 Query: 61 AESFVPHNL--AGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVP 118 A FVPH A G PV +A RDIL++L F +++ V Sbjct: 52 ATEFVPHCTGAASPGTLAATPVVLA-ASPADCPGRDILVNLGQGVPGGFEGFERLIEVVS 110 Query: 119 YEDSLKQLARERYKAYRVAGFNLNTATW 146 R+R+K Y G+ L Sbjct: 111 IHPEDVPAGRDRWKHYAARGYTLKRHDL 138 >UniRef50_C7I265 DNA polymerase III chi subunit HolC n=1 Tax=Thiomonas intermedia K12 RepID=C7I265_THIIN Length = 141 Score = 120 bits (301), Expect = 2e-26, Method: Composition-based stats. Identities = 37/125 (29%), Positives = 51/125 (40%), Gaps = 2/125 (1%) Query: 18 LSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPRGG 77 L + C + + G RVL+A E LD LW SFVPH + Sbjct: 11 LPDPLRYACGLLRTATQRGARVLVAAP-EPLLTELDPLLWTFQPGSFVPHVWQDDPLADK 69 Query: 78 APVEIA-WPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYEDSLKQLARERYKAYRV 136 PV +A P + R L++L + V++ V K ARER +AYR Sbjct: 70 TPVILAPLPDLPRAGRVTALVNLGPDLVTGWESLERVIELVSENGPDKPAARERLRAYRA 129 Query: 137 AGFNL 141 AGF+ Sbjct: 130 AGFDP 134 >UniRef50_A1TZ87 DNA polymerase III chi subunit, HolC n=3 Tax=Marinobacter RepID=A1TZ87_MARAV Length = 169 Score = 116 bits (290), Expect = 3e-25, Method: Composition-based stats. Identities = 34/143 (23%), Positives = 62/143 (43%), Gaps = 6/143 (4%) Query: 6 FYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFV 65 F++L +T +A ++ + W+ G RV + C+ E+QA LD+ LW E+F+ Sbjct: 30 FHILAQNTH----AARNLHAAKLVDKAWQQGDRVCVLCDTEEQALELDDLLWNFTPEAFI 85 Query: 66 PHNLAGEGPRGGA-PVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYEDSLK 124 PH++A + PV I + D +I L ++ + A + + + ++ Sbjct: 86 PHSIAKAATTPCSDPVGILLYPPAAVD-WDTVIVLSSALPEDADQYRRLALVAHNDPAVL 144 Query: 125 QLARERYKAYRVAGFNLNTATWK 147 AR YK R G + Sbjct: 145 NQARGHYKQLRSLGIEARVHDMR 167 >UniRef50_C8N9I8 DNA polymerase III, chi subunit n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N9I8_9GAMM Length = 152 Score = 116 bits (290), Expect = 3e-25, Method: Composition-based stats. Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 5/127 (3%) Query: 2 KNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPA 61 FY+L + + GL +L C++A + + + LI C DE A +LD ALW A Sbjct: 8 PTVRFYVLPDGS---GLENRLELACKLAEKAQQERLKTLIICADEHMAAQLDHALWHYRA 64 Query: 62 ESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSF-ADFATAFTEVVDFVPYE 120 +SF+ H +G+ A V +A P +R +R D+LI+L D V + V + Sbjct: 65 DSFLTHCRSGDPLEAEAAVLLAVPPER-IARTDVLINLSQETAPDLPRDCARVFEIVTPQ 123 Query: 121 DSLKQLA 127 + Q Sbjct: 124 PDVLQST 130 >UniRef50_B9MJ45 DNA polymerase III chi subunit HolC n=3 Tax=Comamonadaceae RepID=B9MJ45_DIAST Length = 146 Score = 115 bits (288), Expect = 5e-25, Method: Composition-based stats. Identities = 37/145 (25%), Positives = 58/145 (40%), Gaps = 15/145 (10%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M F+ D VC + + R RV + D RLD LWA Sbjct: 1 MTQVAFHFNAPD--------KLAYVCRLVRKATRQEARVTV-TGDADTLLRLDRQLWALA 51 Query: 61 AESFVPHNLAG---EGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFV 117 FV H L E R V + R+S RD+L++L + + VV+ V Sbjct: 52 PSDFVGHCLGDADEEILRASPTVLV--QDPRTSPNRDVLVNLGNVLPEGFAQYARVVEVV 109 Query: 118 PY-EDSLKQLARERYKAYRVAGFNL 141 ++ ++ ARER++ Y G+++ Sbjct: 110 SQADEDDRKRARERWRGYAALGYDI 134 >UniRef50_C9YBH7 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YBH7_9BURK Length = 144 Score = 114 bits (286), Expect = 8e-25, Method: Composition-based stats. Identities = 32/148 (21%), Positives = 58/148 (39%), Gaps = 10/148 (6%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M + F+ G + V + + G R+ + Q LD +LWA Sbjct: 1 MTDIAFH--------FGAPNKLEYVGRLLRKAVARGARLTVLAP-PAQVQYLDASLWATS 51 Query: 61 AESFVPHNLA-GEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPY 119 F+ H + G+ P PV + + +L++L T+ F V++ V Sbjct: 52 PTDFLVHAVDDGQAPHAMCPVVLTSRVHGALKNHSVLVNLTTAVPADFVQFERVIEVVSV 111 Query: 120 EDSLKQLARERYKAYRVAGFNLNTATWK 147 +D + LAR R++ Y + G+ + K Sbjct: 112 DDDDRALARNRWRHYVLQGYEIQRHDLK 139 >UniRef50_Q3A4B4 DNA polymerase III, chi subunit n=2 Tax=Desulfuromonadales RepID=Q3A4B4_PELCD Length = 138 Score = 113 bits (283), Expect = 2e-24, Method: Composition-based stats. Identities = 41/143 (28%), Positives = 61/143 (42%), Gaps = 10/143 (6%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M F + +CE+A + G+RVL+ D+ Q LD +W Sbjct: 1 MTRVEF-------VKIKRPEKAKHLCELAEHFFTQGQRVLVMVCDDNQGVTLDRFMWTWK 53 Query: 61 AESFVPHNLA-GEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVP- 118 +F+PH G PV I ++R+ + +LI + DF F V+DF Sbjct: 54 KGAFIPHVYDNGAVDCLDEPVII-EVEERNPNNAGVLIMGKPCSLDFIRQFDLVIDFAEL 112 Query: 119 YEDSLKQLARERYKAYRVAGFNL 141 YE LK AR+RY +R GF + Sbjct: 113 YEPQLKVAARKRYAHFRETGFEV 135 >UniRef50_Q0EY83 DNA polymerase III subunit chi n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EY83_9PROT Length = 146 Score = 110 bits (275), Expect = 2e-23, Method: Composition-based stats. Identities = 41/143 (28%), Positives = 66/143 (46%), Gaps = 11/143 (7%) Query: 3 NATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAE 62 F LL+N V+G++ + + +L+ C D A +LDE LW E Sbjct: 6 RVHFELLENPDRVEGIARLLLRRNRLTPS-------LLVLCPDPGFAAQLDERLWTIHPE 58 Query: 63 SFVPHNLAGEGPRGGA--PVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVP-Y 119 SF+ H +AG A P+ +A R ++ +LI+ + F +VDFV + Sbjct: 59 SFLAHAVAGNDTAQNARQPILLATSIIRDNNPA-VLINGGLEVPPDISGFAHLVDFVDGW 117 Query: 120 EDSLKQLARERYKAYRVAGFNLN 142 ++ LKQ ARER++ Y G + Sbjct: 118 DEGLKQAARERFRTYSQMGLDPK 140 >UniRef50_C1D7G5 HolC n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D7G5_LARHH Length = 140 Score = 109 bits (272), Expect = 3e-23, Method: Composition-based stats. Identities = 31/140 (22%), Positives = 53/140 (37%), Gaps = 9/140 (6%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY ++ C++ G+R+ + DE D LW+ P Sbjct: 1 MTRVDFY--------HHVADPLSFACKLTRTVIGKGERLTVLFADEAALGAFDTRLWSVP 52 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 A+ FVPH + PV +A +L++L A+ +++ V + Sbjct: 53 AQGFVPHVRLDDPLAAETPVLLATSLPE-VPPTGVLLNLSLGEPAGFPAWPRILEIVGED 111 Query: 121 DSLKQLARERYKAYRVAGFN 140 ARE +AY+ AG + Sbjct: 112 AGQLDRAREVARAYKRAGLD 131 >UniRef50_A4SWH8 DNA polymerase III chi subunit, HolC n=18 Tax=Burkholderiaceae RepID=A4SWH8_POLSQ Length = 155 Score = 108 bits (270), Expect = 6e-23, Method: Composition-based stats. Identities = 32/155 (20%), Positives = 53/155 (34%), Gaps = 21/155 (13%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERW---RSGKRV--LIACEDEKQAYRLDEA 55 M F+ + + VC + + W G V ++ D+ +LD Sbjct: 1 MARIDFH--------SNVGDKLEYVCRLIRKIWSATAEGHPVRQIVIVGDKGDLQKLDSL 52 Query: 56 LWARPAESFVPHNLAGEGPRGGAPVEIAWP----QKRSSSRRDILISLRTSFADFA---- 107 LW F+PH P+ +A D+LI + Sbjct: 53 LWTFSTTDFLPHCSINHEAAAETPIVLADDFASTAFSQIPHADVLIHIGVKMPPDVLGLV 112 Query: 108 TAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNLN 142 F +V+ V ++ + RER+KAYR G L+ Sbjct: 113 ERFPRIVEVVTVNEAERLAGRERFKAYRALGHELH 147 >UniRef50_C5CLU6 DNA polymerase III subunit chi n=7 Tax=Comamonadaceae RepID=C5CLU6_VARPS Length = 147 Score = 107 bits (269), Expect = 9e-23, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 52/148 (35%), Gaps = 12/148 (8%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M F+ L C + + ++ + + +D ALW Sbjct: 1 MTEIGFH--------FNLPDKANYACRLVRKAVSVRGLRVVVVGEPQMLEAVDAALWQLS 52 Query: 61 AESFVPHNLAGEGPR--GGAPVEIAWPQKRSSS--RRDILISLRTSFADFATAFTEVVDF 116 F+ H P +PV + ++ R++L++L + F +VD Sbjct: 53 PCDFIAHCRGDAQPHLVARSPVILCAEGADAAGLAHREMLVNLGPTVPVGFERFERLVDI 112 Query: 117 VPYEDSLKQLARERYKAYRVAGFNLNTA 144 V E +Q+ R R++ Y G+++ Sbjct: 113 VSNETDDRQIGRSRWRHYADRGYSIQPH 140 >UniRef50_B1Y7A4 DNA polymerase III chi subunit HolC n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y7A4_LEPCP Length = 145 Score = 107 bits (267), Expect = 1e-22, Method: Composition-based stats. Identities = 29/133 (21%), Positives = 54/133 (40%), Gaps = 7/133 (5%) Query: 20 AVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPH--NLAGEGPRG- 76 + C + + R+G RV + D LD LW FVPH ++ + Sbjct: 14 QRQDYTCRLLRKACRAGARVAV-TGDSAALGELDRQLWIFDPIDFVPHWRGVSADRLPAR 72 Query: 77 --GAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYEDSLKQLARERYKAY 134 P+ + Q + + D+L++L D A+ F V++ V ++ + AR R++ Y Sbjct: 73 LKATPIVL-LDQAGTQAGHDVLLNLAEQVPDCASQFARVIEVVGRSEADRSQARLRWRHY 131 Query: 135 RVAGFNLNTATWK 147 G + + Sbjct: 132 ASLGAAIERHEVR 144 >UniRef50_A3M1A7 DNA polymerase III chi subunit n=18 Tax=Acinetobacter RepID=A3M1A7_ACIBT Length = 135 Score = 106 bits (265), Expect = 3e-22, Method: Composition-based stats. Identities = 32/146 (21%), Positives = 58/146 (39%), Gaps = 11/146 (7%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M +FYL + S C + + ++ C D + LDE LW+ Sbjct: 1 MAKVSFYLFETSEERQVDS-----ACRLCRKILLKHSQIWWYCPDVQLQQTLDEKLWSFD 55 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 SF+ H + + A V I+ Q S + ++ + + F+ +++ V Sbjct: 56 PTSFIAHGVD----QVDAAVCISAKQ--PSEQGWLVFNFNNHALEQVNHFSHIIEIVENN 109 Query: 121 DSLKQLARERYKAYRVAGFNLNTATW 146 ++ KQ+ RE++K YR G T Sbjct: 110 EAAKQIGREKFKMYRRLGIEPRTFKL 135 >UniRef50_D1R4C3 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R4C3_9CHLA Length = 151 Score = 97.2 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 4/119 (3%) Query: 25 VCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVEIAW 84 +CE + + KR+LIA +E+ A L+ LW +P ESF+PH + + + Sbjct: 24 ICETVRQHFAKQKRILIAAPNEEAARYLNALLWKQPEESFLPHIWSESQTEECVAITFS- 82 Query: 85 PQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYEDSLKQLARE-RYKAYRVAGFNLN 142 K + ++ +L++L S +F ++ D D KQ A E R+ Y G ++ Sbjct: 83 --KNNVNQAAVLLNLCPSVHFEWDSFEQIYDLFDETDPEKQKASESRHVYYTEKGCQIH 139 >UniRef50_B0SWN1 DNA polymerase III chi subunit HolC n=6 Tax=Alphaproteobacteria RepID=B0SWN1_CAUSK Length = 153 Score = 94.5 bits (234), Expect = 8e-19, Method: Composition-based stats. Identities = 34/138 (24%), Positives = 60/138 (43%), Gaps = 9/138 (6%) Query: 6 FYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFV 65 FY L+ SA+EQ++ E+ + G R L+ D + LD LW +SF+ Sbjct: 10 FYHLE-------RSALEQVLPELLEKTLGRGWRALVRGGDPARLRALDAHLWTWRDDSFL 62 Query: 66 PHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVP-YEDSLK 124 PH L E PV + + + + + L + + F + ++ Sbjct: 63 PHGLDDEPMADRQPVLLTDKLDNPNGGQALFL-LDGAEPGDLSGFERCILLFDGRDEEAL 121 Query: 125 QLARERYKAYRVAGFNLN 142 +LAR R+KA++ AG ++ Sbjct: 122 RLARGRWKAFKGAGHPVS 139 >UniRef50_A5WBH1 DNA polymerase III, chi subunit n=1 Tax=Psychrobacter sp. PRwf-1 RepID=A5WBH1_PSYWF Length = 166 Score = 93.3 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 31/158 (19%), Positives = 63/158 (39%), Gaps = 19/158 (12%) Query: 3 NATFYLLDN-----------DTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDE-KQAY 50 +FY+L + AV VC + + + L+ +D+ ++ Sbjct: 2 QISFYVLGERYLNDNAAASSTASAANAEAVLNFVCRLTQTVLQKSEHSLVIIDDQVERLK 61 Query: 51 RLDEALWARPAESFVPHN-LAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADF--- 106 +LD LW+ SFV H+ + E ++ ++++L + Sbjct: 62 QLDTQLWSFDPVSFVAHDFILEEAAVSQLSAPVSLVSTLPKGFDGVILNLAATPLPLSVE 121 Query: 107 ---ATAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNL 141 A V++ + +++ KQL R++Y+AY+ GF L Sbjct: 122 TTAAVLPERVLEIITPDEAGKQLGRDKYRAYQQLGFEL 159 >UniRef50_D0L0I9 DNA polymerase III chi subunit HolC n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L0I9_HALNC Length = 147 Score = 92.6 bits (229), Expect = 3e-18, Method: Composition-based stats. Identities = 30/138 (21%), Positives = 58/138 (42%), Gaps = 7/138 (5%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M F+L+D+ T A E+ A+ ++ V + C + D+ LW Sbjct: 1 MSAVIFHLIDDPDT----EAFWFHAAELCAQAAQAEHMVYVVCANLAHVESFDDYLWGYK 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 ++FVPH E AP+ + ++ D +I+L + ++ + V Sbjct: 57 PDAFVPHTADPED-IAHAPIFLGVD--VAAGGFDYVINLSGKPIERVADRIQLDELVDAN 113 Query: 121 DSLKQLARERYKAYRVAG 138 + ++ AR R++ Y+ AG Sbjct: 114 PANREAARARWRDYQAAG 131 >UniRef50_A0LHL4 DNA polymerase III chi subunit n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LHL4_SYNFM Length = 152 Score = 90.6 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 4/110 (3%) Query: 23 QLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVE- 81 +L+C I + +G++V + + A +D+ LW SFVPH + P G P+E Sbjct: 18 KLLCNIVEHFYEAGRKVQVVADSTLGAQHIDQMLWTFSDRSFVPHRIL--DPGRGTPLEP 75 Query: 82 -IAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYEDSLKQLARER 130 + +R D ++ DF TAF V FV +D ++L R Sbjct: 76 VVITVGERILDGFDTVVCDAECRLDFMTAFETAVHFVIRDDVDRRLQSRR 125 >UniRef50_C5SNX1 DNA polymerase III chi subunit HolC n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SNX1_9CAUL Length = 149 Score = 87.5 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 55/142 (38%), Gaps = 9/142 (6%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY L+ L + + + G + + E LD+ LWA Sbjct: 1 MTQVWFYHLERTPLRAALPD-------LLEKTLQKGWKAYVLGEAGDMLVGLDQHLWAYR 53 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTE-VVDFVPY 119 E+F+PH L E PV + +++ D+L S+ + + ++ F Sbjct: 54 DEAFLPHGLESEPEAARQPVLLGDSGG-NANAADVLFSVSAMNLPELSPYQRCLILFEGQ 112 Query: 120 EDSLKQLARERYKAYRVAGFNL 141 +++ AR ++KA + +L Sbjct: 113 DETHLNWARAQWKALKARNLDL 134 >UniRef50_Q2RS95 DNA polymerase III, chi subunit n=6 Tax=Alphaproteobacteria RepID=Q2RS95_RHORT Length = 160 Score = 84.8 bits (209), Expect = 8e-16, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 55/144 (38%), Gaps = 11/144 (7%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY L T D L + A + +R ++ ++ L+ LW Sbjct: 1 MSRFDFYHLQRSTLEDALP-------RLLARVRKGDQRAVVMAGSPERVDGLNSLLWTFD 53 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSF-ADFATAFTEVVDFVP- 118 A S++PH A +G PV + ++ + ++L+ L F ++ Sbjct: 54 AGSWLPHGTARDGDGADQPVWLTIDEENPNG-AEVLV-LTDGVWPSDPARFARILLLFDG 111 Query: 119 YEDSLKQLARERYKAYRVAGFNLN 142 +DS AR +KA R G L+ Sbjct: 112 GDDSAVARARGHWKAMRENGHELH 135 >UniRef50_Q4FVP2 DNA polymerase III, chi subunit n=2 Tax=Psychrobacter RepID=Q4FVP2_PSYA2 Length = 152 Score = 83.7 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 63/153 (41%), Gaps = 19/153 (12%) Query: 3 NATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKR-VLIAC-EDEKQAYRLDEALWARP 60 +FY+L D L +C++ + +LI +D L+EALW + Sbjct: 2 KISFYVLSESKAQDFLG----FICQLTQTALNKSTQSLLILIEDDAALLSALNEALWTQE 57 Query: 61 AESFVPHNLAGEG-----PRGGAPVEIAWPQKRSSSRRDILISLRTSFADFA------TA 109 A SF+PH + + AP+ ++ ++ + ++++ + Sbjct: 58 ATSFIPHQYLLDADTDINHKTLAPILLS--SYMPANFKGMVLNTTIYPVNTFMAATNNAQ 115 Query: 110 FTEVVDFVPYEDSLKQLARERYKAYRVAGFNLN 142 T V++ + + + Q R +YK+Y+ G+ L Sbjct: 116 PTRVLELIKPDATSVQEGRHKYKSYQQLGYELT 148 >UniRef50_B8GVQ9 DNA polymerase III, chi subunit n=3 Tax=Caulobacter RepID=B8GVQ9_CAUCN Length = 153 Score = 82.5 bits (203), Expect = 3e-15, Method: Composition-based stats. Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 9/141 (6%) Query: 3 NATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAE 62 FY L+ S +E ++ E+ + G + L+ D ++ LD+ LW + Sbjct: 7 EVWFYHLE-------RSPLEAVLPELLEKTLGRGWKALVRGGDPRRIEALDQHLWTWRED 59 Query: 63 SFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVP-YED 121 SF+PH LA E PV + + +S D L + + + + + +D Sbjct: 60 SFLPHGLASEPMAERQPVLLTAAEGNPNSG-DALFLIDGAEPGDLSGVSRCILLFDGRDD 118 Query: 122 SLKQLARERYKAYRVAGFNLN 142 AR R+ ++ AG ++ Sbjct: 119 QALAQARGRWSTFKKAGHPVS 139 >UniRef50_Q1QKW7 DNA polymerase III, chi subunit n=13 Tax=Alphaproteobacteria RepID=Q1QKW7_NITHX Length = 151 Score = 81.8 bits (201), Expect = 6e-15, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 45/143 (31%), Gaps = 8/143 (5%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY L N L + + G R ++ E++A LD LW Sbjct: 1 MTEVLFYHLQNMALESVLPP-------LLEKTIERGWRAVVHTTSEERADALDAYLWTYR 53 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 ++F+PH P+ + + + + A+ +V + Sbjct: 54 DDAFLPHATWRIEDASEQPILLTIDGHNPNRATVRFLIDSAPLPENPEAYERLVLVFDGD 113 Query: 121 DS-LKQLARERYKAYRVAGFNLN 142 D AR + + GF + Sbjct: 114 DGIALDAARSVWTECKARGFEVT 136 >UniRef50_C8WFB0 DNA polymerase III chi subunit HolC n=3 Tax=Zymomonas mobilis RepID=C8WFB0_ZYMMN Length = 148 Score = 78.3 bits (192), Expect = 7e-14, Method: Composition-based stats. Identities = 33/135 (24%), Positives = 58/135 (42%), Gaps = 12/135 (8%) Query: 3 NATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAE 62 FY L + + +E ++ IA + S K++L+ D++QA D+ LW Sbjct: 4 RVDFYHLLS-------AKLENILPRIAEKTLSSDKKLLVIVPDDQQARYWDDYLWRYEDT 56 Query: 63 SFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFA-DFATAFTEVVDFVPYED 121 SF+PH G G PV I+ + + + I+L A F V F ++ Sbjct: 57 SFLPHGRVGGGDEAEHPVLISTAME--AVNQASYIALTDGLWRAEALNFERVFYFF--DE 112 Query: 122 SLKQLARERYKAYRV 136 Q AR+ +++ + Sbjct: 113 IAVQQARQAWRSLKN 127 >UniRef50_Q11HH6 DNA polymerase III, chi subunit n=75 Tax=Alphaproteobacteria RepID=Q11HH6_MESSB Length = 172 Score = 77.1 bits (189), Expect = 1e-13, Method: Composition-based stats. Identities = 32/141 (22%), Positives = 49/141 (34%), Gaps = 9/141 (6%) Query: 3 NATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAE 62 FY L T + L + + G RV I E++ LD LW + Sbjct: 17 EVLFYHLTESTLEEALPP-------LVEKSLERGWRVGIQTASEERRDALDACLWTFRDD 69 Query: 63 SFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTE-VVDFVPYED 121 SFVPH E PV + + I + + + V F ++ Sbjct: 70 SFVPHATDREPHAAEQPVILTTAPANP-NGASIRFLVEGAEPGSLDGYQRAVFLFDGHDT 128 Query: 122 SLKQLARERYKAYRVAGFNLN 142 S AR +KA + AG ++ Sbjct: 129 SQLDAARAHWKAMKAAGHDVT 149 >UniRef50_UPI0000E87DA9 DNA polymerase III chi subunit, HolC n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87DA9 Length = 139 Score = 76.0 bits (186), Expect = 4e-13, Method: Composition-based stats. Identities = 28/144 (19%), Positives = 54/144 (37%), Gaps = 12/144 (8%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M N F + ++ + L+ EI A + + L +D+ L + LW Sbjct: 1 MTNIQF--------IFNVADKQGLIFEIIASSVKKNRSSLTLFDDKALMVSLSDMLWHND 52 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 SF+PH I DILI+ + + + ++ + + + Sbjct: 53 VFSFLPHQTNQSSSINK----ICLSDNGIKYMDDILINATNEKIEGFSRYLKLYELIGLD 108 Query: 121 DSLKQLARERYKAYRVAGFNLNTA 144 + K AR+R+ Y+ G+ L+ Sbjct: 109 ELEKANARKRFTFYKDCGYKLSAT 132 >UniRef50_Q0G6N2 DNA polymerase III subunit chi n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G6N2_9RHIZ Length = 150 Score = 76.0 bits (186), Expect = 4e-13, Method: Composition-based stats. Identities = 32/143 (22%), Positives = 55/143 (38%), Gaps = 8/143 (5%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY L D L E+ G RV++ C E++ LD LW Sbjct: 1 MAEVLFYHLTESRLEDALP-------ELLQRSLARGWRVVVQCTSEERRDSLDNVLWTFS 53 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTE-VVDFVPY 119 ESF+PH E P+ + + +++ D+ + + T + V F + Sbjct: 54 EESFLPHGTDAEAHPESQPILLTTRADQFANKPDVRFMVDGATPGDLTGYIRGVYMFDAF 113 Query: 120 EDSLKQLARERYKAYRVAGFNLN 142 + ARE+++ + AG + Sbjct: 114 DTDQMAHAREQWQVEKSAGHEVT 136 >UniRef50_C8PWW7 DNA polymerase III, chi subunit n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PWW7_9GAMM Length = 155 Score = 75.2 bits (184), Expect = 5e-13, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 52/141 (36%), Gaps = 12/141 (8%) Query: 2 KNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPA 61 +FY+L VC++ + + +I + LD+ LW+ Sbjct: 4 SQISFYILSPQKKQ------LAFVCQLISTVLAKSEDSIIVVAASEILPSLDDRLWSLSD 57 Query: 62 ESFVPHNLAGE-----GPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDF 116 +F+PH + + + A V + + + ++I+L A + +++ Sbjct: 58 VAFIPHQIIQQLDDFYQQKLPASVVLTDNIELITQFDGVVINLTNEAIVDTQA-SRLLEV 116 Query: 117 VPYEDSLKQLARERYKAYRVA 137 + + R++Y+ Y+ Sbjct: 117 IDAAPEQVESGRQKYRVYQAQ 137 >UniRef50_D2LDM3 DNA polymerase III chi subunit HolC n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LDM3_RHOVA Length = 158 Score = 75.2 bits (184), Expect = 6e-13, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 55/138 (39%), Gaps = 9/138 (6%) Query: 6 FYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFV 65 FY L+ L + + G R + ++ +D ALW +SF+ Sbjct: 15 FYHLERQPLQAVLPV-------LVEKTLARGWRASLRFSSAERLDAIDTALWTYREDSFL 67 Query: 66 PHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFV-PYEDSLK 124 PH A +G PV + ++ + + ++L L + F V+ +D K Sbjct: 68 PHGTARDGHADRQPVFLTL-EEANPNNAEVLFLLEGARESEPERFVRVIRLFDDPDDEAK 126 Query: 125 QLARERYKAYRVAGFNLN 142 +ARE ++ + AG ++ Sbjct: 127 AIAREEWRGAKAAGRPVS 144 >UniRef50_B9KSS8 DNA polymerase III chi subunit n=39 Tax=Rhodobacterales RepID=B9KSS8_RHOSK Length = 162 Score = 70.6 bits (172), Expect = 2e-11, Method: Composition-based stats. Identities = 33/136 (24%), Positives = 53/136 (38%), Gaps = 8/136 (5%) Query: 4 ATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAES 63 FY L + D L + G RV++ D + LD ALW P E Sbjct: 14 VMFYHLTRSSAEDTLRL-------LLPRALGQGWRVMLRGTDRARLEALDLALWRVPEEG 66 Query: 64 FVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEV-VDFVPYEDS 122 F+PH + G PV + + ++ +L+ + A A V + F +++ Sbjct: 67 FLPHGMEGGPHDAVQPVLLGTGAIGNGAQALMLLDGAATEAAEAAPLERVWILFDGLDEA 126 Query: 123 LKQLARERYKAYRVAG 138 AR ++KA AG Sbjct: 127 ELGRARGQWKALTGAG 142 >UniRef50_Q0BNV1 DNA-directed DNA polymerase n=19 Tax=Francisella RepID=Q0BNV1_FRATO Length = 146 Score = 70.2 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 35/149 (23%), Positives = 61/149 (40%), Gaps = 11/149 (7%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M F +L L E L+ E+ + + K + I A +LD+ LW Sbjct: 1 MMKIEFKVLQTQDINQML---EVLITEVV-KEYALQKIIAILAP-AGIAKQLDDKLWQDG 55 Query: 61 AESFVPHNLAGEGPRG----GAPVEIAWPQKRSSSRRDILISLRT-SFADFATAFTEVVD 115 +SF+PH+ A P+ I +S D+LI++ + E+ + Sbjct: 56 QDSFIPHHCAINAREYNQYNNIPILIT-DNLFITSGYDVLINIMDVAVDPQRVKVKELKE 114 Query: 116 FVPYEDSLKQLARERYKAYRVAGFNLNTA 144 FV +DS Q +R++Y Y+ + + T Sbjct: 115 FVYQQDSALQASRKKYVYYKKSNLEIITV 143 >UniRef50_Q1GS99 DNA polymerase III chi subunit, HolC n=2 Tax=Sphingomonadaceae RepID=Q1GS99_SPHAL Length = 149 Score = 69.1 bits (168), Expect = 4e-11, Method: Composition-based stats. Identities = 34/138 (24%), Positives = 51/138 (36%), Gaps = 10/138 (7%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY L D L A +AA +G R+L+ Q +D ALW Sbjct: 1 MPRVDFYRLTRDPVERVLPA-------LAARVLGNGDRLLVVAAAAMQRQDIDAALWTAN 53 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFA-DFATAFTEVVDFVPY 119 SF+PH AG P+ ++ S ++L + A AF F + Sbjct: 54 PASFLPHGHAGTPDEAIEPILLSGTLDTSPPNGASRLALADGEWREDALAFDRT--FFLF 111 Query: 120 EDSLKQLARERYKAYRVA 137 ++S AR ++A Sbjct: 112 DNSRIDDARATWRALAAR 129 >UniRef50_A3JPE3 DNA polymerase III subunit chi n=1 Tax=Rhodobacterales bacterium HTCC2150 RepID=A3JPE3_9RHOB Length = 156 Score = 68.3 bits (166), Expect = 8e-11, Method: Composition-based stats. Identities = 30/144 (20%), Positives = 54/144 (37%), Gaps = 9/144 (6%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY L ++ L +I + +G RV++ +++ LD+ LW + Sbjct: 1 MSATYFYHLTHEPLESALP-------KIIVKARAAGWRVVVRGTSDERLDWLDKQLWTQT 53 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDIL-ISLRTSFADFATAFTEV-VDFVP 118 A+ F+PH +G PV + + + ++ I AD F + + F Sbjct: 54 ADGFLPHGRSGGKFDADQPVLLTNSSETPNDAACLIAIDRAAISADDVAKFERICLMFNG 113 Query: 119 YEDSLKQLARERYKAYRVAGFNLN 142 AR ++K GF Sbjct: 114 NNGDALDDARTQWKTLSDQGFEAQ 137 >UniRef50_B6BVC9 Putative uncharacterized protein n=1 Tax=beta proteobacterium KB13 RepID=B6BVC9_9PROT Length = 139 Score = 67.9 bits (165), Expect = 8e-11, Method: Composition-based stats. Identities = 30/144 (20%), Positives = 65/144 (45%), Gaps = 13/144 (9%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M F + + D+ +GL+ + +R++ +R +I C++ + ++ L ++LW P Sbjct: 1 MTQIEF-IYNLDSYKEGLALIL-------DKRYK-NQRTIIFCDNTETSHELSDSLWMNP 51 Query: 61 AESFVPHNLAGEGPRGGA-PVE-IAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVP 118 F P+ + E P E + + +++I++ F + + + ++ V Sbjct: 52 --GFFPNIIWSEKLSSDVQPSENFLIGSQFNKYFDELVINVSGQECSFFSRYEKSIELVL 109 Query: 119 YEDSLKQLARERYKAYRVAGFNLN 142 D+ K ARER K R G+ + Sbjct: 110 KSDNEKASARERLKKIRECGYEVK 133 >UniRef50_C6XKP3 DNA polymerase III chi subunit HolC n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XKP3_HIRBI Length = 169 Score = 67.9 bits (165), Expect = 1e-10, Method: Composition-based stats. Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 17/141 (12%) Query: 6 FYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFV 65 FY L+ + + L + + + RVLI D + +LD LW A+SF+ Sbjct: 20 FYHLERTSLEEALGP-------LLEKCLQKDWRVLI-VGDGDRLPKLDLGLWTWKADSFL 71 Query: 66 PHNLAG---EGPRGGAPVEIAWPQKRSSSRRDILISLR----TSFADFATAFTEVVDFVP 118 PH G E P+ ++ +++ DI++ L + D AT + + Sbjct: 72 PHARLGGRDEIDPMAQPILLS-NTPEPANKADIIVLLDGKRLPNEPDDATQYIRCMVVFD 130 Query: 119 YED-SLKQLARERYKAYRVAG 138 +D + + AR ++K + AG Sbjct: 131 GDDFNARDTARSQFKGAKDAG 151 >UniRef50_A3UJ95 DNA polymerase III subunit chi n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UJ95_9RHOB Length = 149 Score = 67.5 bits (164), Expect = 1e-10, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 8/114 (7%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY L+N + + L E+ + G R ++ ++E + LD LW Sbjct: 1 MAELWFYHLENASVDEALP-------ELLTKLMERGGRAVVCSQEETRLDHLDSHLWTFR 53 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVV 114 ESF+PH A P+ ++ + + + +L L + +A+ VV Sbjct: 54 EESFLPHGRADAEHVEHQPIVLS-DRTDNPNSASMLFCLDGADPGDVSAWDRVV 106 >UniRef50_Q6MCC4 Putative uncharacterized protein n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MCC4_PARUW Length = 150 Score = 65.6 bits (159), Expect = 5e-10, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 50/125 (40%), Gaps = 3/125 (2%) Query: 19 SAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPRGGA 78 A L+C A E + KR+ I + +D LW P +SF+ H L Sbjct: 25 QAKIHLICSKAKESFEQEKRLQILVPTIEAGQYIDSLLWRYPEDSFLTHTLTTN--LSPE 82 Query: 79 PVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYEDSLK-QLARERYKAYRVA 137 + I + + + L++L + + F E+ + K + ++ R+K Y+ Sbjct: 83 WIVITTEETVNLNLAARLLNLCPHPIKYFSLFAEIYELYDESHPQKLENSKLRFKNYQDW 142 Query: 138 GFNLN 142 G L+ Sbjct: 143 GLALS 147 >UniRef50_B3CTW6 DNA polymerase III chi subunit HolC n=2 Tax=Orientia tsutsugamushi RepID=B3CTW6_ORITI Length = 169 Score = 62.9 bits (152), Expect = 3e-09, Method: Composition-based stats. Identities = 20/148 (13%), Positives = 52/148 (35%), Gaps = 17/148 (11%) Query: 2 KNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPA 61 K+ FY Q +C++ + + + + +++K ++ LW+ + Sbjct: 3 KSINFY-------CTLTELFNQTLCKLLEKCYSTSLNTITLVDEKKTEEAINNTLWSFSS 55 Query: 62 ESFVPHNLAGEGPRGGAPVEIAWPQKRSS-SRRDILISLR--------TSFADFATAFTE 112 SF+PH + + P+ I + + ++ +L+ L + + F Sbjct: 56 TSFIPHGCSIDPEPSSQPIYITTNYENPNQAKILVLVILSYNCCNADYDNNISYFQQFER 115 Query: 113 VVDFVPYEDSLKQLARERYKA-YRVAGF 139 ++ D+ Y + G+ Sbjct: 116 ILIIFKENDNKLIDYMNNYYHRLKQDGY 143 >UniRef50_C6XHX1 DNA polymerase III subunit chi n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XHX1_LIBAP Length = 141 Score = 62.1 bits (150), Expect = 6e-09, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 58/147 (39%), Gaps = 13/147 (8%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M+ FY ND + L + + + GKRV + C E+ L+E LW Sbjct: 1 MRTLLFYRFKNDWEYNLLV--------LLQDEYEKGKRVSVQCGSERVRDSLNEYLWTWK 52 Query: 61 AESFVPHNL-AGE--GPRGGAPVEIAWPQKRSSSRR-DILISLRTSFADFATAFTEVVDF 116 + F+PH + G+ PV + +++ L+ + + +VV Sbjct: 53 KDGFLPHGVDVGDEGDFSSFQPVLLTISSLNANTSTIRFLVDEASMHIGDVDYYEKVVFI 112 Query: 117 VPYEDS-LKQLARERYKAYRVAGFNLN 142 + +D + R +++ + +G+ + Sbjct: 113 INTDDQGSLEWGRAHWRSLKNSGYAPD 139 >UniRef50_Q0BZX6 Putative DNA polymerase III chi subunit n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BZX6_HYPNA Length = 156 Score = 61.7 bits (149), Expect = 6e-09, Method: Composition-based stats. Identities = 33/138 (23%), Positives = 53/138 (38%), Gaps = 11/138 (7%) Query: 6 FYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFV 65 FY L SA+E+ + + G RVL ++ +LD LW SF+ Sbjct: 10 FYHLS-------RSALEEAAAPLLQKCLEVGWRVLAVSPRAERLAKLDAVLWTFDDASFL 62 Query: 66 PHNLAGEGPRGGA--PVEIAWPQKRSSSRRDILISLRTSFADFATAFTEV-VDFVPYEDS 122 PH A A PV ++ ++S +++ AF V F + Sbjct: 63 PHGQADAPGLDVARQPVLLSAKLTNANSADALMLMDGVEAPVD-VAFKRCMVMFEDADTG 121 Query: 123 LKQLARERYKAYRVAGFN 140 + AR ++KA + AG Sbjct: 122 TRNKARAQFKAAKDAGLT 139 >UniRef50_C6ACN2 DNA polymerase III subunit chi n=3 Tax=Bartonella RepID=C6ACN2_BARGA Length = 148 Score = 61.7 bits (149), Expect = 7e-09, Method: Composition-based stats. Identities = 31/141 (21%), Positives = 48/141 (34%), Gaps = 11/141 (7%) Query: 4 ATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAES 63 FY L T D L + +V I C E+Q +D LW ES Sbjct: 3 ILFYHLTQSTLKDILPT-------LVERALARFGKVTIQCVSEEQRDSMDMHLWVYADES 55 Query: 64 FVPHNLAGEGPRGGAPVEIAWPQKRSSSRR-DILISLRTSFADFATAFTEVVDFVP-YED 121 F+ H + PV + Q+ + + LI + +V +D Sbjct: 56 FIGHGTECDQYSNFQPVFLTTGQENPNDSKIRFLIEGAVC--SNIDTYQRLVVIFDGRDD 113 Query: 122 SLKQLARERYKAYRVAGFNLN 142 L R ++K Y++ NL Sbjct: 114 EQLSLVRAQWKKYKMENHNLT 134 >UniRef50_Q2G9Y6 DNA polymerase III chi subunit, HolC n=2 Tax=Sphingomonadales RepID=Q2G9Y6_NOVAD Length = 143 Score = 61.7 bits (149), Expect = 7e-09, Method: Composition-based stats. Identities = 31/130 (23%), Positives = 52/130 (40%), Gaps = 12/130 (9%) Query: 3 NATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAE 62 FY L +D L IA +G+R+L+ +DE Q R+ EALW R E Sbjct: 2 RVDFYQLTSDPAEQVLPL-------IARNTLAAGERLLVVSDDEAQLRRVGEALWTRLPE 54 Query: 63 SFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYEDS 122 +F+ + AG P+ ++ + ++ + + L AF V P + Sbjct: 55 TFLANGRAGTAHDERQPILLSDAPEPANGAKFMA--LADGVWRE-GAFERVFLLFP--PA 109 Query: 123 LKQLARERYK 132 AR ++ Sbjct: 110 RIDDARGCWR 119 >UniRef50_Q9ZC94 Uncharacterized protein RP872 n=16 Tax=Rickettsia RepID=Y872_RICPR Length = 165 Score = 59.0 bits (142), Expect = 4e-08, Method: Composition-based stats. Identities = 17/112 (15%), Positives = 44/112 (39%), Gaps = 8/112 (7%) Query: 22 EQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVE 81 + + + + + S + +I D Q L++ LW + F+PH + P+ Sbjct: 26 LKAILRLIEKCYYSNFKSVILTTDVHQQEMLNKNLWTYSRKQFIPHGSKFDPQPAKQPIY 85 Query: 82 IAWPQKRSSSRRDILISLRT-------SFADFATAFTEVVDFVPYEDSLKQL 126 I + ++ + +L+ + ++ F ++ ++LK+L Sbjct: 86 IT-DELQNPNNASVLVIISPTDIAKILQVKEYIKVFKRIIIITDLLENLKEL 136 >UniRef50_A5PC15 DNA polymerase III chi subunit n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PC15_9SPHN Length = 146 Score = 56.7 bits (136), Expect = 2e-07, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 52/136 (38%), Gaps = 12/136 (8%) Query: 3 NATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAE 62 FY L ND V+ V ++A + ++G+R+++ DE+ + + LW + Sbjct: 2 RVDFYQLSND-------PVDVTVAKLARKVLQAGERLVVVAADERLREHISKTLWEQGGG 54 Query: 63 SFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFA-DFATAFTEVVDFVPYED 121 SF+ + A P+ IA + R + L + A+ F + E Sbjct: 55 SFLANGPADGPHAARQPILIAETCAAPNEARMAI--LADGQWREDASGFDRTMLLFDAE- 111 Query: 122 SLKQLARERYKAYRVA 137 + AR ++ Sbjct: 112 -ATEAARGLWRELAAR 126 >UniRef50_Q6G047 Putative uncharacterized protein n=1 Tax=Bartonella quintana RepID=Q6G047_BARQU Length = 153 Score = 56.7 bits (136), Expect = 2e-07, Method: Composition-based stats. Identities = 31/144 (21%), Positives = 52/144 (36%), Gaps = 13/144 (9%) Query: 2 KNAT--FYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWAR 59 K FY L T D L + + RV I C ++++ +D LW Sbjct: 4 KRVDIFFYHLMQSTLEDILPT-------LVERALAAFGRVTIQCVNKERRDAIDMHLWVY 56 Query: 60 PAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRR-DILISLRTSFADFATAFTEVVDFVP 118 E+F+ H + PV + Q+ + + LI + A+ +V Sbjct: 57 ADEAFIGHGTECDQYPNFQPVFLTTGQENPNDSKIRFLI--EGAICSDIDAYQRLVVIFD 114 Query: 119 Y-EDSLKQLARERYKAYRVAGFNL 141 D L R ++K Y++ NL Sbjct: 115 DHSDEQLNLVRAQWKKYKMENHNL 138 >UniRef50_B2IFT8 DNA polymerase III chi subunit HolC n=2 Tax=Beijerinckiaceae RepID=B2IFT8_BEII9 Length = 156 Score = 56.3 bits (135), Expect = 3e-07, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 56/145 (38%), Gaps = 17/145 (11%) Query: 6 FYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFV 65 FY L +E+++ ++ + G R ++ E++ LD+ LW SF+ Sbjct: 7 FYHLQRH-------PIERVLPKLLEKSLEHGWRAIVQARSEERLAVLDQWLWVYSDASFL 59 Query: 66 PHNLAGEGPRGGAPVEIAWPQKRSSSRRDIL-------ISLRTSFADFATAFTE-VVDFV 117 H A +G PV + + R L +SL ++ + +V F Sbjct: 60 AHGRACDGDAVMQPVYLTTEMDNPNGARLRLFIEGADIVSLMQD--PSSSLYARMIVLFN 117 Query: 118 PYEDSLKQLARERYKAYRVAGFNLN 142 +++ +AR +++ + L Sbjct: 118 GHDEEELTIARRQWQDLKARSLPLT 142 >UniRef50_A3VUH0 DNA polymerase III subunit chi n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VUH0_9PROT Length = 145 Score = 55.6 bits (133), Expect = 5e-07, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 35/121 (28%), Gaps = 11/121 (9%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY + L + R ++ DE D+ALW Sbjct: 1 MTEILFYHCERARPEAVLPV-------LLERSLARDWRAVVRLPDEAAVRYWDDALWTYA 53 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISL-RTSFADFATAFTEVVDFVPY 119 +SF+PH P P+ + + R IL SL +V Sbjct: 54 DDSFLPHGAG--PPAADQPIWLTADETLP-PGRQILFSLVAEGVEKGGEGLERIVLLFDE 110 Query: 120 E 120 + Sbjct: 111 D 111 >UniRef50_Q2N8X5 DNA polymerase III chi subunit n=1 Tax=Erythrobacter litoralis HTCC2594 RepID=Q2N8X5_ERYLH Length = 144 Score = 49.4 bits (117), Expect = 4e-05, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 49/131 (37%), Gaps = 11/131 (8%) Query: 3 NATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAE 62 A F+ L D +++V IAA G+R+L+ +D+++ + +ALW E Sbjct: 2 KADFWQLSRD-------PADKVVAMIAARVLDEGERLLVVAKDDEKRAAIAKALWEAKPE 54 Query: 63 SFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYEDS 122 F+ + A P+ + + ++ ++ F D Sbjct: 55 HFLANGEASADHAERQPILLGETCEAANGASHVIF--ADGEWRDPHGFERAFLLFS--DE 110 Query: 123 LKQLARERYKA 133 + AR ++A Sbjct: 111 TLEAARATWRA 121 >UniRef50_A5G173 DNA polymerase III chi subunit, HolC n=13 Tax=Rhodospirillales RepID=A5G173_ACICJ Length = 155 Score = 49.0 bits (116), Expect = 5e-05, Method: Composition-based stats. Identities = 27/123 (21%), Positives = 37/123 (30%), Gaps = 9/123 (7%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY L L A+ +G R ++ D + LD ALW P Sbjct: 1 MAQLGFYHLTRTGLEAALPALLAR-------TLAAGARAVVRGTDPARIEALDAALWLAP 53 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 ++PH A G PV + + R + L F V D Sbjct: 54 GVDWLPHGTAAMGHGPDQPVWLTTGDDVPNDARFLF--LVDGATADLARFERVFDLFDGN 111 Query: 121 DSL 123 D Sbjct: 112 DPD 114 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q0HXF4 DNA polymerase III chi subunit, HolC n=9 Tax=She... 184 5e-46 UniRef50_Q3JEC9 DNA polymerase III chi subunit, HolC n=2 Tax=Nit... 183 1e-45 UniRef50_B8GTX7 DNA polymerase III chi subunit HolC n=1 Tax=Thio... 179 2e-44 UniRef50_B5F9Q5 DNA polymerase III subunit chi n=6 Tax=Gammaprot... 176 1e-43 UniRef50_Q1N2A3 DNA polymerase III chi subunit, HolC n=1 Tax=Ber... 176 2e-43 UniRef50_A1RHG9 DNA polymerase III chi subunit, HolC n=12 Tax=Sh... 176 3e-43 UniRef50_C0N7W1 DNA polymerase III, chi subunit superfamily n=1 ... 175 3e-43 UniRef50_P28905 DNA polymerase III subunit chi n=172 Tax=Gammapr... 175 4e-43 UniRef50_Q15PX3 DNA polymerase III, chi subunit n=1 Tax=Pseudoal... 174 5e-43 UniRef50_A0YCI5 DNA polymerase III subunit chi n=1 Tax=marine ga... 171 5e-42 UniRef50_Q0VSA6 DNA polymerase III, chi subunit n=2 Tax=Alcanivo... 171 9e-42 UniRef50_C5S9R7 DNA polymerase III chi subunit HolC n=1 Tax=Allo... 168 4e-41 UniRef50_Q7R6X2 Cytosol aminopeptidase (Fragment) n=3 Tax=cellul... 168 6e-41 UniRef50_B3PDI9 DNA polymerase III, chi subunit n=1 Tax=Cellvibr... 168 6e-41 UniRef50_O68823 DNA polymerase III subunit chi n=20 Tax=Pseudomo... 167 8e-41 UniRef50_C4LA52 DNA polymerase III chi subunit HolC n=1 Tax=Tolu... 167 1e-40 UniRef50_A1SRZ0 DNA polymerase III chi subunit, HolC n=2 Tax=Psy... 166 2e-40 UniRef50_Q1QTE2 DNA polymerase III chi subunit, HolC n=1 Tax=Chr... 166 2e-40 UniRef50_B3R662 DNA POLYMERASE III, CHI SUBUNIT n=14 Tax=Burkhol... 166 3e-40 UniRef50_Q3SL84 Putative DNA polymerase III chi subunit n=1 Tax=... 165 5e-40 UniRef50_A7C6F2 DNA polymerase III chi subunit, HolC n=1 Tax=Beg... 164 8e-40 UniRef50_A4A3Y4 DNA polymerase III chi subunit, HolC n=5 Tax=unc... 164 9e-40 UniRef50_Q1LTH9 DNA polymerase III, chi subunit n=1 Tax=Baumanni... 163 1e-39 UniRef50_Q0AIF4 DNA polymerase III, chi subunit n=3 Tax=Nitrosom... 163 2e-39 UniRef50_B9ZL66 DNA polymerase III chi subunit HolC n=1 Tax=Thio... 163 2e-39 UniRef50_C5V3L7 DNA polymerase III chi subunit HolC n=2 Tax=Gall... 162 3e-39 UniRef50_C3NVA1 DNA polymerase III chi subunit n=40 Tax=Vibrio R... 162 3e-39 UniRef50_Q5ZS87 DNA polymerase III, chi subunit n=6 Tax=Legionel... 162 4e-39 UniRef50_Q1H4U3 DNA polymerase III, chi subunit n=2 Tax=Methylop... 161 7e-39 UniRef50_Q2SKR1 DNA polymerase III, chi subunit n=1 Tax=Hahella ... 160 1e-38 UniRef50_P43749 DNA polymerase III subunit chi n=33 Tax=Pasteure... 159 2e-38 UniRef50_C7R5R1 DNA polymerase III chi subunit HolC n=1 Tax=Kang... 159 2e-38 UniRef50_Q488M5 DNA polymerase III, chi subunit n=1 Tax=Colwelli... 158 5e-38 UniRef50_Q21KZ6 DNA polymerase III chi subunit, HolC n=2 Tax=Alt... 158 7e-38 UniRef50_Q2BIS6 DNA polymerase III chi subunit, HolC n=1 Tax=Nep... 157 1e-37 UniRef50_Q1YRR0 DNA polymerase III, chi subunit n=1 Tax=gamma pr... 156 2e-37 UniRef50_A9IIK0 DNA polymerase III, chi subunit n=5 Tax=Bordetel... 156 3e-37 UniRef50_Q3II74 DNA polymerase III, chi subunit n=3 Tax=Alteromo... 156 3e-37 UniRef50_A4SSA6 DNA polymerase III, chi subunit n=2 Tax=Aeromona... 155 3e-37 UniRef50_Q7NTZ0 DNA polymerase III, chi subunit n=2 Tax=Chromoba... 153 1e-36 UniRef50_Q7MHG2 DNA polymerase III, chi subunit n=15 Tax=Vibrion... 153 2e-36 UniRef50_A2SH60 DNA polymerase III, chi subunit n=1 Tax=Methylib... 152 3e-36 UniRef50_A4BLM8 DNA polymerase III subunit chi n=1 Tax=Nitrococc... 152 4e-36 UniRef50_A4VNZ8 DNA polymerase III, chi subunit n=2 Tax=Pseudomo... 151 7e-36 UniRef50_Q47BG8 DNA polymerase III chi subunit, HolC n=1 Tax=Dec... 151 9e-36 UniRef50_B4RWP0 DNA polymerase III chi subunit n=1 Tax=Alteromon... 149 2e-35 UniRef50_C7RP73 DNA polymerase III chi subunit HolC n=1 Tax=Cand... 149 2e-35 UniRef50_A1VP98 DNA polymerase III, chi subunit n=39 Tax=Burkhol... 149 3e-35 UniRef50_Q5QY16 DNA polymerase III chi subunit n=2 Tax=Idiomarin... 149 3e-35 UniRef50_C3X5D7 DNA polymerase III chi subunit n=2 Tax=Oxalobact... 148 5e-35 UniRef50_UPI0000E0E595 DNA polymerase III subunit chi n=1 Tax=Rh... 147 1e-34 UniRef50_A4BBY3 DNA polymerase III subunit chi n=1 Tax=Reinekea ... 145 4e-34 UniRef50_Q5NXM0 DNA polymerase III, chi subunit n=2 Tax=Rhodocyc... 145 4e-34 UniRef50_Q7VQT1 DNA polymerase III, chi subunit n=2 Tax=Candidat... 144 7e-34 UniRef50_C9YBH7 Putative uncharacterized protein n=1 Tax=Curviba... 144 8e-34 UniRef50_C4KAG2 DNA polymerase III chi subunit HolC n=1 Tax=Thau... 144 1e-33 UniRef50_A1WUV2 DNA polymerase III chi subunit, HolC n=1 Tax=Hal... 144 1e-33 UniRef50_C6MGG5 DNA polymerase III chi subunit HolC n=1 Tax=Nitr... 143 1e-33 UniRef50_B0SWN1 DNA polymerase III chi subunit HolC n=6 Tax=Alph... 142 2e-33 UniRef50_A8PP43 DNA polymerase III, chi subunit n=1 Tax=Ricketts... 141 5e-33 UniRef50_C6WT44 DNA polymerase III chi subunit HolC n=1 Tax=Meth... 139 3e-32 UniRef50_A5EVT2 DNA polymerase III chi subunit n=1 Tax=Dicheloba... 138 4e-32 UniRef50_C1D7G5 HolC n=1 Tax=Laribacter hongkongensis HLHK9 RepI... 138 5e-32 UniRef50_Q3BP99 DNA polymerase III holoenzyme chi subunit n=25 T... 136 2e-31 UniRef50_B4RJ23 HolC n=19 Tax=Neisseria RepID=B4RJ23_NEIG2 136 3e-31 UniRef50_Q0AB76 DNA polymerase III chi subunit, HolC n=1 Tax=Alk... 135 4e-31 UniRef50_B8GVQ9 DNA polymerase III, chi subunit n=3 Tax=Caulobac... 135 4e-31 UniRef50_A0LB28 DNA polymerase III, chi subunit n=1 Tax=Magnetoc... 135 5e-31 UniRef50_C5CLU6 DNA polymerase III subunit chi n=7 Tax=Comamonad... 134 6e-31 UniRef50_C5SNX1 DNA polymerase III chi subunit HolC n=1 Tax=Asti... 133 2e-30 UniRef50_A4SWH8 DNA polymerase III chi subunit, HolC n=18 Tax=Bu... 132 4e-30 UniRef50_Q2RS95 DNA polymerase III, chi subunit n=6 Tax=Alphapro... 130 1e-29 UniRef50_C5TNX8 DNA polymerase III chi subunit n=8 Tax=Neisseria... 130 1e-29 UniRef50_A3M1A7 DNA polymerase III chi subunit n=18 Tax=Acinetob... 130 1e-29 UniRef50_B5EKZ3 DNA polymerase III chi subunit HolC n=2 Tax=Acid... 129 2e-29 UniRef50_Q1QKW7 DNA polymerase III, chi subunit n=13 Tax=Alphapr... 129 2e-29 UniRef50_B9MJ45 DNA polymerase III chi subunit HolC n=3 Tax=Coma... 129 3e-29 UniRef50_Q11HH6 DNA polymerase III, chi subunit n=75 Tax=Alphapr... 128 5e-29 UniRef50_B1Y7A4 DNA polymerase III chi subunit HolC n=1 Tax=Lept... 128 7e-29 UniRef50_A1TZ87 DNA polymerase III chi subunit, HolC n=3 Tax=Mar... 127 8e-29 UniRef50_Q0G6N2 DNA polymerase III subunit chi n=1 Tax=Fulvimari... 126 2e-28 UniRef50_Q31ET2 DNA polymerase III, chi subunit n=1 Tax=Thiomicr... 126 2e-28 UniRef50_C7I265 DNA polymerase III chi subunit HolC n=1 Tax=Thio... 125 6e-28 UniRef50_C6NVB1 DNA polymerase III chi subunit n=1 Tax=Acidithio... 123 2e-27 UniRef50_D2LDM3 DNA polymerase III chi subunit HolC n=1 Tax=Rhod... 123 2e-27 UniRef50_C8N9I8 DNA polymerase III, chi subunit n=1 Tax=Cardioba... 119 3e-26 UniRef50_Q0EY83 DNA polymerase III subunit chi n=1 Tax=Mariprofu... 119 4e-26 UniRef50_A3JPE3 DNA polymerase III subunit chi n=1 Tax=Rhodobact... 119 4e-26 UniRef50_C6ACN2 DNA polymerase III subunit chi n=3 Tax=Bartonell... 116 2e-25 UniRef50_Q3A4B4 DNA polymerase III, chi subunit n=2 Tax=Desulfur... 116 3e-25 UniRef50_C8WFB0 DNA polymerase III chi subunit HolC n=3 Tax=Zymo... 112 5e-24 UniRef50_UPI0000E87DA9 DNA polymerase III chi subunit, HolC n=1 ... 111 6e-24 UniRef50_Q6G047 Putative uncharacterized protein n=1 Tax=Bartone... 111 1e-23 UniRef50_A5WBH1 DNA polymerase III, chi subunit n=1 Tax=Psychrob... 111 1e-23 UniRef50_D0L0I9 DNA polymerase III chi subunit HolC n=1 Tax=Halo... 110 1e-23 UniRef50_Q4FVP2 DNA polymerase III, chi subunit n=2 Tax=Psychrob... 109 3e-23 UniRef50_B9KSS8 DNA polymerase III chi subunit n=39 Tax=Rhodobac... 108 4e-23 UniRef50_B2IFT8 DNA polymerase III chi subunit HolC n=2 Tax=Beij... 108 5e-23 UniRef50_C6XKP3 DNA polymerase III chi subunit HolC n=1 Tax=Hirs... 108 5e-23 UniRef50_Q0BZX6 Putative DNA polymerase III chi subunit n=1 Tax=... 106 2e-22 UniRef50_D1R4C3 Putative uncharacterized protein n=1 Tax=Parachl... 104 1e-21 UniRef50_A3UJ95 DNA polymerase III subunit chi n=1 Tax=Oceanicau... 104 1e-21 UniRef50_Q1GS99 DNA polymerase III chi subunit, HolC n=2 Tax=Sph... 103 2e-21 UniRef50_B6BVC9 Putative uncharacterized protein n=1 Tax=beta pr... 102 3e-21 UniRef50_C6XHX1 DNA polymerase III subunit chi n=1 Tax=Candidatu... 102 3e-21 UniRef50_C8PWW7 DNA polymerase III, chi subunit n=1 Tax=Enhydrob... 101 8e-21 UniRef50_B3CTW6 DNA polymerase III chi subunit HolC n=2 Tax=Orie... 99 3e-20 UniRef50_A3VUH0 DNA polymerase III subunit chi n=1 Tax=Parvularc... 99 4e-20 UniRef50_Q0BNV1 DNA-directed DNA polymerase n=19 Tax=Francisella... 97 1e-19 UniRef50_A5PC15 DNA polymerase III chi subunit n=1 Tax=Erythroba... 97 1e-19 UniRef50_Q2G9Y6 DNA polymerase III chi subunit, HolC n=2 Tax=Sph... 96 2e-19 UniRef50_A0LHL4 DNA polymerase III chi subunit n=1 Tax=Syntropho... 93 2e-18 UniRef50_Q2N8X5 DNA polymerase III chi subunit n=1 Tax=Erythroba... 90 2e-17 UniRef50_Q9ZC94 Uncharacterized protein RP872 n=16 Tax=Rickettsi... 89 4e-17 UniRef50_A5G173 DNA polymerase III chi subunit, HolC n=13 Tax=Rh... 87 2e-16 UniRef50_Q6MCC4 Putative uncharacterized protein n=1 Tax=Candida... 85 7e-16 Sequences not found previously or not previously below threshold: CONVERGED! >UniRef50_Q0HXF4 DNA polymerase III chi subunit, HolC n=9 Tax=Shewanella RepID=Q0HXF4_SHESR Length = 154 Score = 184 bits (469), Expect = 5e-46, Method: Composition-based stats. Identities = 58/146 (39%), Positives = 81/146 (55%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M A FYLL LS + QL C +A + + + ++V I C+D+ A+ +DE LW Sbjct: 1 MTQALFYLLPPMGVNTALSDMYQLACRLAQQGFINQQQVYIHCQDKNIAFEIDELLWQFE 60 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 +FVPHNL GEGP G+PVEI + + + R +LI+L FA F ++ DFV + Sbjct: 61 PSAFVPHNLKGEGPTTGSPVEIGFDRLGPNKSRQLLINLADQVPPFAVNFGQIFDFVAND 120 Query: 121 DSLKQLARERYKAYRVAGFNLNTATW 146 D K +ARERY+ YR G L T Sbjct: 121 DQHKAIARERYRQYRGLGIELTTQNL 146 >UniRef50_Q3JEC9 DNA polymerase III chi subunit, HolC n=2 Tax=Nitrosococcus oceani RepID=Q3JEC9_NITOC Length = 143 Score = 183 bits (466), Expect = 1e-45, Method: Composition-based stats. Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 5/146 (3%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FYLL + A ++ C++ + +R G +V I ED+ QA +D+ LW Sbjct: 1 MTKVDFYLLTSRQPQ----ASKRFTCKLIEKVYRLGHQVYIQVEDQAQAQEMDDLLWTFR 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 SFVPH L G PV I + + + ++LI+L F + F V + + + Sbjct: 57 QGSFVPHALVNSEEATGTPVLIGYDGE-PGGKLELLINLGAEVPAFFSRFQRVAEVIGPD 115 Query: 121 DSLKQLARERYKAYRVAGFNLNTATW 146 ++ + R+RY+ YR G +L T Sbjct: 116 ETHRHAGRQRYRYYRDHGCSLETHEL 141 >UniRef50_B8GTX7 DNA polymerase III chi subunit HolC n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GTX7_THISH Length = 147 Score = 179 bits (456), Expect = 2e-44, Method: Composition-based stats. Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 7/146 (4%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY+LD+ + C + + + G R+ + + +LD+ LW Sbjct: 1 MTRIDFYVLDDTDPGQ----RLRTACRLIGKAYGLGHRIHVHTGSRALSMQLDDLLWTFR 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 SF+PH + GE PV+I Q+ + DIL++L T F + F V + V + Sbjct: 57 DVSFIPHQVEGED--AECPVQICHDQE-PQNAGDILVNLDTQVPLFFSRFERVAEIVNQD 113 Query: 121 DSLKQLARERYKAYRVAGFNLNTATW 146 +++ RERY+ Y+ G++L+ Sbjct: 114 PAIRDAGRERYRFYKDRGYDLSHHRL 139 >UniRef50_B5F9Q5 DNA polymerase III subunit chi n=6 Tax=Gammaproteobacteria RepID=B5F9Q5_VIBFM Length = 147 Score = 176 bits (448), Expect = 1e-43, Method: Composition-based stats. Identities = 65/147 (44%), Positives = 86/147 (58%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M A FY+L+ + + VC++A + RV + +D++QA +DEALW Sbjct: 1 MSQALFYVLEPTSPAATTDGQLKFVCQLAHYYYSQNARVYVLAQDKEQALLIDEALWQYD 60 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 F PHNL GEGP+ G+P+EI W RSS RR +LI+L A FA +F +VVDFVP E Sbjct: 61 VSEFTPHNLVGEGPKSGSPIEIGWGTLRSSGRRHVLINLAQEVASFAVSFAQVVDFVPCE 120 Query: 121 DSLKQLARERYKAYRVAGFNLNTATWK 147 + KQ ARERYK YR AG + T K Sbjct: 121 EKSKQQARERYKIYRNAGRAMQTEILK 147 >UniRef50_Q1N2A3 DNA polymerase III chi subunit, HolC n=1 Tax=Bermanella marisrubri RepID=Q1N2A3_9GAMM Length = 142 Score = 176 bits (448), Expect = 2e-43, Method: Composition-based stats. Identities = 42/147 (28%), Positives = 73/147 (49%), Gaps = 6/147 (4%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M + FY+L + A C +A + ++ G+++ + +DE+QA +LD+ +W Sbjct: 1 MTSIDFYILGHSQQQ----ARLSFACRLAEKAFKEGRQIYVHAQDEQQAKQLDDLMWEYK 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 ESF+PH + GE VEI W Q S D+LI+L + F + F V++ V + Sbjct: 57 PESFLPHQIVGEQ-ASQTQVEIGW-QDHPSHHFDVLINLVSPQPSFFSRFDRVLEIVIQD 114 Query: 121 DSLKQLARERYKAYRVAGFNLNTATWK 147 ++ +R YK YR G+ + + Sbjct: 115 ETSLAQSRAHYKFYRDRGYEVTHRDLR 141 >UniRef50_A1RHG9 DNA polymerase III chi subunit, HolC n=12 Tax=Shewanella RepID=A1RHG9_SHESW Length = 176 Score = 176 bits (446), Expect = 3e-43, Method: Composition-based stats. Identities = 56/162 (34%), Positives = 80/162 (49%), Gaps = 16/162 (9%) Query: 1 MKNATFYLLDN----------------DTTVDGLSAVEQLVCEIAAERWRSGKRVLIACE 44 M A FYL+ T L A+ C++A + + + V I C+ Sbjct: 7 MTQALFYLMPPVAQSGHIAIQSAISTVANTNAALGAMHLFACQLAQQAYIKQQLVYIHCQ 66 Query: 45 DEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFA 104 D+ A +DE LW +FVPHNL GEGP GAPVEI + + ++ R +LI++ Sbjct: 67 DKNLALEIDELLWQFEPTAFVPHNLKGEGPITGAPVEIGFDRLGANKSRQLLINIADQAP 126 Query: 105 DFATAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNLNTATW 146 FA F +++DFV +D K +ARERY+ YR G L T Sbjct: 127 PFAVNFGQIIDFVANDDQHKAVARERYRQYRDLGIELTTHNL 168 >UniRef50_C0N7W1 DNA polymerase III, chi subunit superfamily n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N7W1_9GAMM Length = 142 Score = 175 bits (445), Expect = 3e-43, Method: Composition-based stats. Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 4/146 (2%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M +FY+L + + C +A + + G +V I ++ +Q+ LDEALWA Sbjct: 1 MTRVSFYILKST----QFEKRQAFACRLAEKAYHQGHQVYIHTDNAEQSAALDEALWAIR 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 ESFVPH + +PV I D+LI+L F + F V + + Sbjct: 57 PESFVPHEVINTDADNQSPVLIGHKDSTPPRLMDVLINLTEQQPLFFSQFDRVAEVIDDN 116 Query: 121 DSLKQLARERYKAYRVAGFNLNTATW 146 D +KQ R+R++ Y+ G+ L+T Sbjct: 117 DDVKQAGRQRFQFYKQRGYELDTFHV 142 >UniRef50_P28905 DNA polymerase III subunit chi n=172 Tax=Gammaproteobacteria RepID=HOLC_ECOLI Length = 147 Score = 175 bits (445), Expect = 4e-43, Method: Composition-based stats. Identities = 147/147 (100%), Positives = 147/147 (100%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP Sbjct: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE Sbjct: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 Query: 121 DSLKQLARERYKAYRVAGFNLNTATWK 147 DSLKQLARERYKAYRVAGFNLNTATWK Sbjct: 121 DSLKQLARERYKAYRVAGFNLNTATWK 147 >UniRef50_Q15PX3 DNA polymerase III, chi subunit n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15PX3_PSEA6 Length = 156 Score = 174 bits (443), Expect = 5e-43, Method: Composition-based stats. Identities = 62/144 (43%), Positives = 87/144 (60%), Gaps = 2/144 (1%) Query: 1 MKNATFYLLDNDTTVD-GLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWAR 59 M TFYLL+ + A L C++AA+ + + +R ++ C+ + QA + DE LW Sbjct: 1 MSKVTFYLLEQEAEATSQQPAHLALACQLAAQCFSNKQRCVVMCQSQAQAEQFDELLWQL 60 Query: 60 PAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPY 119 P + FVPHNL GEGP+ G PVEI W + + + +LI+L + DF F+ + DFVP Sbjct: 61 PNDRFVPHNLTGEGPQAGTPVEICWQRPSQFN-KPVLINLADNMPDFHGKFSRIYDFVPA 119 Query: 120 EDSLKQLARERYKAYRVAGFNLNT 143 D+LKQ ARERYK YR AG L+T Sbjct: 120 ADALKQQARERYKHYRAAGHQLDT 143 >UniRef50_A0YCI5 DNA polymerase III subunit chi n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YCI5_9GAMM Length = 145 Score = 171 bits (435), Expect = 5e-42, Method: Composition-based stats. Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 7/149 (4%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY+L D++ C +A + ++ G + I D QA LDE LW+ Sbjct: 1 MTKIDFYILPYDSS----EQRHLFACRLAEKAFKLGNEIYIHGSDGDQAKALDELLWSWR 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIAW--PQKRSSSRRDILISLRTSFADFATAFTEVVDFVP 118 SF+PH + + P+ I + ++ S +LI+L +F + F V + V Sbjct: 57 NTSFIPHKI-DDNSTDEQPLHIGFGKDKQMSGDHNGLLINLSDHVPEFFSRFERVSEIVV 115 Query: 119 YEDSLKQLARERYKAYRVAGFNLNTATWK 147 + ++ + R Y+ Y+ G++L+T + Sbjct: 116 QDSAVTESTRANYRFYKNRGYHLDTHDLR 144 >UniRef50_Q0VSA6 DNA polymerase III, chi subunit n=2 Tax=Alcanivorax RepID=Q0VSA6_ALCBS Length = 148 Score = 171 bits (433), Expect = 9e-42, Method: Composition-based stats. Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 8/146 (5%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M TFYL ++ G + L IA + + G++V + C++E A +LD W P Sbjct: 10 MTEVTFYL----SSKVGEGVRQALAWRIADKALKQGRQVYVHCQNEAHARQLDAQFWQSP 65 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 F+PH L+ EG APV + + + D+LI+L DF++ F V + + + Sbjct: 66 PTGFLPHALSSEG---QAPVLLGFGDD-PGHQHDVLINLSDGVPDFSSRFQRVAEMISGD 121 Query: 121 DSLKQLARERYKAYRVAGFNLNTATW 146 ++ +Q RER++ YR GF + T Sbjct: 122 EAERQQGRERFRFYRDRGFPVTTHEL 147 >UniRef50_C5S9R7 DNA polymerase III chi subunit HolC n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S9R7_CHRVI Length = 143 Score = 168 bits (427), Expect = 4e-41, Method: Composition-based stats. Identities = 41/147 (27%), Positives = 63/147 (42%), Gaps = 5/147 (3%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY L+ D+ L C + RVLI C D ++A LD LW Sbjct: 1 MTRVDFYSLEPDSRG----DRFILACRLVERIRAQDLRVLILCPDREEARHLDRLLWTMR 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 ESF+PH L G P+ I+ S +L++L + F + D V + Sbjct: 57 QESFLPHGLVGTVDTDLTPILISLDG-ASEHGCPVLLNLSRALPAGLERFERLCDLVDND 115 Query: 121 DSLKQLARERYKAYRVAGFNLNTATWK 147 +++Q RER++AYR G+ + + Sbjct: 116 PAVRQAGRERFRAYRERGYEPDHHKIR 142 >UniRef50_Q7R6X2 Cytosol aminopeptidase (Fragment) n=3 Tax=cellular organisms RepID=Q7R6X2_PLAYO Length = 612 Score = 168 bits (426), Expect = 6e-41, Method: Composition-based stats. Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 7/141 (4%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FYLL ++ C + + +R G V + + + +A +LD+ LW Sbjct: 478 MTRVDFYLLPAG------ESLLSYACRLTEKAYRQGHTVFLVTDTDDEAAQLDDMLWTFR 531 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 SFVPH A G P +A ++ D++I+L ++ + F V++ V + Sbjct: 532 QGSFVPH-RAVTGHTAAGPCPVAVGREPPVGFDDVMINLGSAVPEAFRRFRRVIELVGPD 590 Query: 121 DSLKQLARERYKAYRVAGFNL 141 D+ + L RE ++ YR G N Sbjct: 591 DAARALKREHFRHYRSEGLNP 611 >UniRef50_B3PDI9 DNA polymerase III, chi subunit n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PDI9_CELJU Length = 139 Score = 168 bits (426), Expect = 6e-41, Method: Composition-based stats. Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 7/146 (4%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY+L T+ A C + + R G +L+A ++ +QA DE LW Sbjct: 1 MTQVDFYVLPETTS----EARWLFACRLIEKVQRMGMDILVAVDNPEQAREFDELLWTFK 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 ESF+PH L PV+I + Q+ S + + +L++L + + F + + V E Sbjct: 57 PESFIPHQLLDIQQPA--PVQITYNQE-SGNHQGLLLNLSSGIPPYFDRFARLSEIVIQE 113 Query: 121 DSLKQLARERYKAYRVAGFNLNTATW 146 + + +RER+ Y+ G+ + T Sbjct: 114 EKALKTSRERFSFYKGRGYPIETRKL 139 >UniRef50_O68823 DNA polymerase III subunit chi n=20 Tax=Pseudomonadaceae RepID=HOLC_PSEAE Length = 142 Score = 167 bits (424), Expect = 8e-41, Method: Composition-based stats. Identities = 47/146 (32%), Positives = 74/146 (50%), Gaps = 7/146 (4%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY++ + SA Q+ C +A + WR G +V + C DE Q LD LW+ Sbjct: 1 MTRVDFYVIPSADP----SARLQVACRLAEKAWRQGMQVYLHCADEAQRSELDGRLWSFR 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 E+F+PH+LA E APV + + + RD+LI+L F F+ V + V E Sbjct: 57 GEAFIPHSLAEED--AEAPVALGLG-EPPGNHRDLLINLTLEAPGFVPNFSRVAELVVEE 113 Query: 121 DSLKQLARERYKAYRVAGFNLNTATW 146 +++Q AR++++ YR G+ L Sbjct: 114 PAIRQAARDKFRFYREQGYPLQDHRL 139 >UniRef50_C4LA52 DNA polymerase III chi subunit HolC n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LA52_TOLAT Length = 159 Score = 167 bits (423), Expect = 1e-40, Method: Composition-based stats. Identities = 56/150 (37%), Positives = 78/150 (52%), Gaps = 7/150 (4%) Query: 1 MKNATFYLLDNDTTVDGLSA-----VEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEA 55 M TFYLL ++ + + V L C++ ER+R + + + + + QA +LDE Sbjct: 7 MPQVTFYLLPDEASPTQICDGLSHVVAVLACQLTTERFRQNQTLFLLTQTQVQAEQLDEM 66 Query: 56 LWARPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVD 115 LW + SFVPH L+ E APVEI R +LI+L FA F +++D Sbjct: 67 LWQQDPHSFVPHGLSDEATVTQAPVEIGTG--MPKRSRQVLINLADGIPAFAGRFAQIID 124 Query: 116 FVPYEDSLKQLARERYKAYRVAGFNLNTAT 145 FVP ++ KQ ARERYK YR GF L T Sbjct: 125 FVPADEIQKQQARERYKQYRALGFTLETVP 154 >UniRef50_A1SRZ0 DNA polymerase III chi subunit, HolC n=2 Tax=Psychromonas RepID=A1SRZ0_PSYIN Length = 160 Score = 166 bits (422), Expect = 2e-40, Method: Composition-based stats. Identities = 58/149 (38%), Positives = 82/149 (55%), Gaps = 4/149 (2%) Query: 1 MKNATFYLL--DNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWA 58 M FY+ + ++ +SA C IAA + K+V I + ++ A+ +DE LW Sbjct: 1 MSQVVFYVFTTEEKSSSVAISAHFAYACRIAAFFYAQNKKVFIYTDSKEDAFAVDEYLWQ 60 Query: 59 RPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVP 118 +SFVPHNL GEGP+ G PVEI+W + R ILI+L DFA F +++DFVP Sbjct: 61 FDGDSFVPHNLLGEGPKFGTPVEISW--QVPLHPRPILINLSQKTPDFAINFQKIIDFVP 118 Query: 119 YEDSLKQLARERYKAYRVAGFNLNTATWK 147 + + K AR RY YR G L+T T + Sbjct: 119 FPEPQKIAARIRYSTYRKMGLTLSTQTVE 147 >UniRef50_Q1QTE2 DNA polymerase III chi subunit, HolC n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QTE2_CHRSD Length = 150 Score = 166 bits (420), Expect = 2e-40, Method: Composition-based stats. Identities = 36/146 (24%), Positives = 62/146 (42%), Gaps = 5/146 (3%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY+L + T L A C +A R G R+ I EDE A LDE LW Sbjct: 1 MTQVDFYILPDTT----LDARLAFACRLAETIHRKGYRLHIHTEDETMARELDERLWTFK 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 ES++PH + G+ PV + W + + + +++L ++ + F V + + Sbjct: 57 PESYLPHAVLGDDVSPEPPVTLGW-EAPPAPGVEAMLNLHPEIPEWFSRFERVAEIINQH 115 Query: 121 DSLKQLARERYKAYRVAGFNLNTATW 146 + R ++ Y+ G+ + Sbjct: 116 QDVLTAKRACWQTYKKRGYPVKANDL 141 >UniRef50_B3R662 DNA POLYMERASE III, CHI SUBUNIT n=14 Tax=Burkholderiales RepID=B3R662_CUPTR Length = 144 Score = 166 bits (420), Expect = 3e-40, Method: Composition-based stats. Identities = 32/146 (21%), Positives = 57/146 (39%), Gaps = 10/146 (6%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M F+ + V VC + + + +G++V+I Q LD LW Sbjct: 1 MTRIDFH--------SNVPDVLGYVCRLVRKAYGAGQKVVIHGA-PAQLADLDARLWTFS 51 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 A F+PH P+ +A + +LI+L +F +++ V Sbjct: 52 ALDFLPHCGLESPNAAVTPILLAATTEG-VPHHQLLINLAEEAPAQFASFERLIEVVGAG 110 Query: 121 DSLKQLARERYKAYRVAGFNLNTATW 146 D+ ++ R+RY+ YR G+ L Sbjct: 111 DAAREAGRQRYRFYRERGYPLTHHDI 136 >UniRef50_Q3SL84 Putative DNA polymerase III chi subunit n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SL84_THIDA Length = 143 Score = 165 bits (418), Expect = 5e-40, Method: Composition-based stats. Identities = 37/147 (25%), Positives = 61/147 (41%), Gaps = 9/147 (6%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY + +AA+ + GK+V+I D A +D LW P Sbjct: 1 MTEIIFY--------TFAEDRLDVARRVAAKAYGQGKQVMIYAPDAAVAGAVDRMLWTTP 52 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 A FVPH + PV I + D++I+L ++ F +V+ V + Sbjct: 53 ALGFVPHARDSDALAAETPVLIGAD-AGALRHADVMINLDSAQPPAFGRFERLVEIVGTD 111 Query: 121 DSLKQLARERYKAYRVAGFNLNTATWK 147 D+ ++ R RY+ Y+ G+ L T + Sbjct: 112 DAEREQGRARYRFYQSRGYALKTHDLR 138 >UniRef50_A7C6F2 DNA polymerase III chi subunit, HolC n=1 Tax=Beggiatoa sp. PS RepID=A7C6F2_9GAMM Length = 143 Score = 164 bits (416), Expect = 8e-40, Method: Composition-based stats. Identities = 41/146 (28%), Positives = 63/146 (43%), Gaps = 5/146 (3%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY+L A ++ C++ + W G R+ I QA +LD LW Sbjct: 1 MPQIDFYILHTQNRY----AKDRFTCQLTDKAWHQGYRIYIQTTSLAQAQQLDNFLWVFK 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 ESF+PH++ E AP+ I + + D+LI+L + F +F + + V Sbjct: 57 EESFLPHDIYPEMSESLAPIRIGYSAQV-CEGMDVLINLTETVPPFFESFQRIAEIVNDT 115 Query: 121 DSLKQLARERYKAYRVAGFNLNTATW 146 KQ R RY+ YR + L T Sbjct: 116 PYAKQAGRTRYRFYRDKAYVLKTHDI 141 >UniRef50_A4A3Y4 DNA polymerase III chi subunit, HolC n=5 Tax=unclassified Gammaproteobacteria RepID=A4A3Y4_9GAMM Length = 142 Score = 164 bits (415), Expect = 9e-40, Method: Composition-based stats. Identities = 44/146 (30%), Positives = 67/146 (45%), Gaps = 7/146 (4%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY+++N T S+ +L + + + G RV I E+E QA LDE LW Sbjct: 1 MTRVGFYIVENTDT----SSRTRLALRLTEKAHKQGHRVFINSENEAQARELDELLWTFR 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 SF+PH L + + I W Q+ + D+LI+L+ S DF F V + V E Sbjct: 57 PASFLPHALCSDDSSEQ--ICIGWGQE-PAGHDDLLINLQLSVPDFIGRFQRVAELVNQE 113 Query: 121 DSLKQLARERYKAYRVAGFNLNTATW 146 + + R ++ YR G+ L Sbjct: 114 PARLEALRHSWRHYRERGYALEEHRL 139 >UniRef50_Q1LTH9 DNA polymerase III, chi subunit n=1 Tax=Baumannia cicadellinicola str. Hc (Homalodisca coagulata) RepID=Q1LTH9_BAUCH Length = 154 Score = 163 bits (414), Expect = 1e-39, Method: Composition-based stats. Identities = 71/142 (50%), Positives = 94/142 (66%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 MK TFY L+ T + L A+EQL + WR+GKR+LIACE QA ++D LWA+ Sbjct: 1 MKKVTFYRLNKKTIPNWLIAMEQLAYHLVVINWRAGKRILIACESNDQAKKIDHGLWAKT 60 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 +F+PHNL GEGP+ GAPVEI WP + + + RD++I+L DF +F E++DF+P E Sbjct: 61 PTAFIPHNLVGEGPKDGAPVEICWPHQYNYTPRDLIINLLPKCTDFIFSFNEIIDFIPDE 120 Query: 121 DSLKQLARERYKAYRVAGFNLN 142 + KQLAR RYKAYR GF L Sbjct: 121 EFFKQLARNRYKAYRNVGFQLT 142 >UniRef50_Q0AIF4 DNA polymerase III, chi subunit n=3 Tax=Nitrosomonadaceae RepID=Q0AIF4_NITEC Length = 142 Score = 163 bits (413), Expect = 2e-39, Method: Composition-based stats. Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 9/148 (6%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY G + + C + ++ + G + ++ D + A R D+ LW Sbjct: 1 MTQIDFY--------TGATDRLLIACRLCSKAVQQGLKTVVYIPDAELANRFDKLLWTFS 52 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRS-SSRRDILISLRTSFADFATAFTEVVDFVPY 119 SFVPH A + G PV + + + D+L++L + F VV+ V Sbjct: 53 PTSFVPHCQADDKLAGVTPVILNNQLEMPEVAYFDVLLNLDAAIPSGFEHFKRVVEIVDE 112 Query: 120 EDSLKQLARERYKAYRVAGFNLNTATWK 147 + K AR+RY+ Y+ G ++ + Sbjct: 113 IEDSKLHARKRYRRYQELGHDIRHHRLE 140 >UniRef50_B9ZL66 DNA polymerase III chi subunit HolC n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZL66_9GAMM Length = 139 Score = 163 bits (412), Expect = 2e-39, Method: Composition-based stats. Identities = 39/146 (26%), Positives = 62/146 (42%), Gaps = 7/146 (4%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M + +FYLL + A + C +A + G RV I + LDE LW Sbjct: 1 MTHVSFYLLQDPAP----EARLRFTCRLAKKASGQGHRVHIHTGSPELTRTLDEWLWTFE 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 +F+PH+ + PV + S R D+LI+L ++ F V D V E Sbjct: 57 DTTFLPHST--DVRNTDVPVSL-HEAHAPSDRCDVLINLAADVPEYCGRFERVADIVGGE 113 Query: 121 DSLKQLARERYKAYRVAGFNLNTATW 146 +S ++ R RY+ ++ G+ L Sbjct: 114 ESEREAGRARYRYFKERGYPLKHHNI 139 >UniRef50_C5V3L7 DNA polymerase III chi subunit HolC n=2 Tax=Gallionellaceae RepID=C5V3L7_9PROT Length = 141 Score = 162 bits (411), Expect = 3e-39, Method: Composition-based stats. Identities = 35/146 (23%), Positives = 63/146 (43%), Gaps = 11/146 (7%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY G S + C+++ + + G R +I+ D LD+ LW P Sbjct: 1 MTKVDFY--------TGSSDKLRTACQLSHKAMQHGLRTVISLPDAVSCEMLDKLLWQYP 52 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 +F+PH A PV ++ ++ + D+LI+L F + F V++ + + Sbjct: 53 DTAFIPHCDASSPDSA--PVYLSLGEE-NFPHHDMLITLHNECTPFFSRFERVIEIIGTD 109 Query: 121 DSLKQLARERYKAYRVAGFNLNTATW 146 + + RER+K YR G+ + Sbjct: 110 EDDSRRGRERFKFYRDRGYEMRHFDL 135 >UniRef50_C3NVA1 DNA polymerase III chi subunit n=40 Tax=Vibrio RepID=C3NVA1_VIBCJ Length = 154 Score = 162 bits (410), Expect = 3e-39, Method: Composition-based stats. Identities = 59/147 (40%), Positives = 79/147 (53%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M ATFYL+ D+ + Q V + G R+ + C+D+ A +L E W Sbjct: 6 MPTATFYLISRDSAQATPEGLAQYVLYLTRHFAAQGARIYLQCQDKPHAEQLAERFWQIE 65 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 E F+ HNL GEGP+ G +EI + S R + I+L + FA FTEVVDFVP Sbjct: 66 PEQFLAHNLVGEGPKSGTAIEIGYVGVSPSWNRQLAINLADNQTTFARTFTEVVDFVPCA 125 Query: 121 DSLKQLARERYKAYRVAGFNLNTATWK 147 ++ KQLARERYK YR AG+ L T + Sbjct: 126 ENAKQLARERYKLYRQAGYQLQTVEIQ 152 >UniRef50_Q5ZS87 DNA polymerase III, chi subunit n=6 Tax=Legionella RepID=Q5ZS87_LEGPH Length = 144 Score = 162 bits (410), Expect = 4e-39, Method: Composition-based stats. Identities = 48/145 (33%), Positives = 76/145 (52%), Gaps = 5/145 (3%) Query: 3 NATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAE 62 FYLL + + + C + + + G + + C++++QA LDE LW + Sbjct: 5 RVDFYLLASSLP----ESRWLVACRLIEKAYTKGHTIFVFCDNQQQAEYLDELLWTFKDD 60 Query: 63 SFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYEDS 122 SF+PHNL GEGP PV+I + QK DIL++L T+ F T F V++ V + Sbjct: 61 SFIPHNLQGEGPEPPPPVQIGY-QKEPRGFTDILLNLSTNIPIFYTRFKRVIELVSNVEH 119 Query: 123 LKQLARERYKAYRVAGFNLNTATWK 147 K+++R YK YR G L+T + + Sbjct: 120 EKEVSRLHYKEYRHKGCELHTHSIE 144 >UniRef50_Q1H4U3 DNA polymerase III, chi subunit n=2 Tax=Methylophilaceae RepID=Q1H4U3_METFK Length = 154 Score = 161 bits (408), Expect = 7e-39, Method: Composition-based stats. Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 9/145 (6%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M F+ + V +++ + G+R+++ ++ A +L LW+ P Sbjct: 1 MTRVDFF--------FNVPNKAAHVASLSSRAVQRGRRLMVLASTQQAAEQLGSFLWSSP 52 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 F+PH A PV I W + DILI+L + + F + F +++ V E Sbjct: 53 PTGFLPHCHATHPRAAETPVIIDWRHE-PLPHDDILINLDSQYPPFFSRFRRLIEIVGLE 111 Query: 121 DSLKQLARERYKAYRVAGFNLNTAT 145 + + ARERY+ YR G+ L T Sbjct: 112 EEDRAAARERYRFYRDRGYELRTFD 136 >UniRef50_Q2SKR1 DNA polymerase III, chi subunit n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SKR1_HAHCH Length = 141 Score = 160 bits (405), Expect = 1e-38, Method: Composition-based stats. Identities = 39/147 (26%), Positives = 73/147 (49%), Gaps = 8/147 (5%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M A F+LL + ++ + +C + + +R G R+ I C+D K+ LD+ L++ Sbjct: 1 MPKADFHLLSSGD----IAQRDFYLCRLCEKIYRLGHRIYILCKDSKELEHLDDLLYSFR 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 ESF+PH++ E P PV + + + +++I+L + D A V++ V + Sbjct: 57 PESFIPHSIEPEPPSSDIPVFLCT-RLPETISTEVVINLTEAPPDKA---DRVIELVTGD 112 Query: 121 DSLKQLARERYKAYRVAGFNLNTATWK 147 + +R+ YK Y+ GF L T + Sbjct: 113 PGARAKSRKVYKLYKQLGFELQTYNIE 139 >UniRef50_P43749 DNA polymerase III subunit chi n=33 Tax=Pasteurellaceae RepID=HOLC_HAEIN Length = 144 Score = 159 bits (404), Expect = 2e-38, Method: Composition-based stats. Identities = 71/147 (48%), Positives = 98/147 (66%), Gaps = 5/147 (3%) Query: 1 MKN-ATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWAR 59 M A FY+L + T+ VE++ C +AA WRSGK+VLI+CE E QA +DE LW R Sbjct: 1 MAKTAQFYILTENCTLT----VEEIACNLAASIWRSGKKVLISCESEAQALEIDERLWQR 56 Query: 60 PAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPY 119 FVPHNL+GE + P+EI+W KR+ RRD+LI+L+ DF+ +FT+++DFVP Sbjct: 57 DPNEFVPHNLSGEATQYPTPIEISWLGKRNLQRRDLLINLQQEIPDFSHSFTQIIDFVPK 116 Query: 120 EDSLKQLARERYKAYRVAGFNLNTATW 146 +D+LK ARERYK R+ G+NL+T Sbjct: 117 DDALKTQARERYKQLRLQGWNLSTENV 143 >UniRef50_C7R5R1 DNA polymerase III chi subunit HolC n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R5R1_KANKD Length = 142 Score = 159 bits (404), Expect = 2e-38, Method: Composition-based stats. Identities = 53/143 (37%), Positives = 76/143 (53%), Gaps = 4/143 (2%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M F++L++ G A +LV + ++ G++V I DEKQA+ +DE LWA Sbjct: 1 MTQVEFHILESQP---GEEAYLRLVGQCVKSLYKQGRKVYIHAHDEKQAHAVDEYLWALD 57 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 F+PHN+ GEGP PV+I + Q + D LI+L F + F + + VP E Sbjct: 58 LNEFIPHNMVGEGPAKAPPVQIGFNQP-PEEQHDCLINLSRDVQPFFSYFLKCYEIVPNE 116 Query: 121 DSLKQLARERYKAYRVAGFNLNT 143 D K+ ARERYK YR G+ L Sbjct: 117 DEHKESARERYKYYRGHGYPLQH 139 >UniRef50_Q488M5 DNA polymerase III, chi subunit n=1 Tax=Colwellia psychrerythraea 34H RepID=Q488M5_COLP3 Length = 157 Score = 158 bits (400), Expect = 5e-38, Method: Composition-based stats. Identities = 59/146 (40%), Positives = 86/146 (58%), Gaps = 5/146 (3%) Query: 2 KNATFYLLDNDTTVDGLSAV---EQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWA 58 FYLL +D T + C A+ +R +RV I +D++ A ++DE LWA Sbjct: 4 TQVMFYLLKDDVTDEKEEDTRSAIYHACLQASHFYRQNQRVYIYAKDQQHAEQIDEMLWA 63 Query: 59 RPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVP 118 ++SFVPHNL GEGP+ GA VEI + + RR +LI+L ++ +FA F +VDFVP Sbjct: 64 FDSDSFVPHNLVGEGPKQGAMVEIGY--QAPQGRRPVLINLNSAVPNFANQFQFIVDFVP 121 Query: 119 YEDSLKQLARERYKAYRVAGFNLNTA 144 +++LKQ ARER+K R GF ++ Sbjct: 122 SDETLKQQARERFKTCRQWGFQVDNQ 147 >UniRef50_Q21KZ6 DNA polymerase III chi subunit, HolC n=2 Tax=Alteromonadales RepID=Q21KZ6_SACD2 Length = 149 Score = 158 bits (399), Expect = 7e-38, Method: Composition-based stats. Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 13/154 (8%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY+L Q C +A + G +VLIA +DE + +DE LW + Sbjct: 1 MTRIDFYVLSASDDKS----RWQFACRLAEKAVSRGNKVLIATQDEAASRAVDELLWTQR 56 Query: 61 AESFVPHNLAGE--------GPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTE 112 ESFVPH++ G+ P PV I D+L+++RT+ + + F Sbjct: 57 PESFVPHHIVGQNTDGQSSYAPTAKPPVVITHDLDD-IDHHDVLVNIRTTRPEQFSRFDR 115 Query: 113 VVDFVPYEDSLKQLARERYKAYRVAGFNLNTATW 146 + + V + + + R+ Y Y+ G+ + T Sbjct: 116 LAEIVIQQPEVLENTRQSYAFYKQRGYPVQTHKL 149 >UniRef50_Q2BIS6 DNA polymerase III chi subunit, HolC n=1 Tax=Neptuniibacter caesariensis RepID=Q2BIS6_9GAMM Length = 146 Score = 157 bits (397), Expect = 1e-37, Method: Composition-based stats. Identities = 37/148 (25%), Positives = 71/148 (47%), Gaps = 7/148 (4%) Query: 1 MK-NATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWAR 59 M A FY+L + A + +C + + G ++ I DE++A R+D+ LW Sbjct: 1 MTSKADFYVLPSSDPD----ARGRFLCRLVEKIGALGHQIYIQTPDEQEAKRIDQLLWEY 56 Query: 60 PAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPY 119 E+F+PH+L G+ +PV+I W ++R +D+ ++L A F +++ V Sbjct: 57 RPEAFIPHHLLGDDKIS-SPVQIGWNEQRP-EHKDVYVNLNLDIPQDALEFERILEVVVQ 114 Query: 120 EDSLKQLARERYKAYRVAGFNLNTATWK 147 + + R+ YK Y+ G ++ + Sbjct: 115 TEDVLTSTRKNYKTYQSNGIQIDMHDMR 142 >UniRef50_Q1YRR0 DNA polymerase III, chi subunit n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YRR0_9GAMM Length = 143 Score = 156 bits (394), Expect = 2e-37, Method: Composition-based stats. Identities = 38/146 (26%), Positives = 66/146 (45%), Gaps = 9/146 (6%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M + +FY L D L LVC++ + + ++VL D A +LD+ LW Sbjct: 1 MTSVSFYKLSGD-----LQVALALVCQLTQKAVNAKQQVLCLVPDNDTAEQLDKLLWGFQ 55 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 A +FVPH + E P+ I+ ILI+L+ + + + F V++ + E Sbjct: 56 ASAFVPHGVGIE----HLPIAISADSSDPGEHHGILINLQGAIPTWFSRFERVMEVIYPE 111 Query: 121 DSLKQLARERYKAYRVAGFNLNTATW 146 +Q R+ +K Y+ G+ L+ Sbjct: 112 PDYEQAKRDNFKFYKERGYPLSFHDL 137 >UniRef50_A9IIK0 DNA polymerase III, chi subunit n=5 Tax=Bordetella RepID=A9IIK0_BORPD Length = 147 Score = 156 bits (394), Expect = 3e-37, Method: Composition-based stats. Identities = 36/148 (24%), Positives = 66/148 (44%), Gaps = 10/148 (6%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M F G + + C+ A +R+++G+R+++ C D + D LWA Sbjct: 3 MTRIDF--------AFGAADRLRAACQAARKRYQAGQRLVVYCADGARLAAFDRMLWAFD 54 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRD--ILISLRTSFADFATAFTEVVDFVP 118 SFVPH LA + PV + + ++ D L++L F V++ V Sbjct: 55 DVSFVPHVLATDPLAADTPVILTAAAPQPAAAGDEPWLLNLDDDCPPGYDGFARVLEIVS 114 Query: 119 YEDSLKQLARERYKAYRVAGFNLNTATW 146 + + +Q AR+R++ Y+ AG ++ Sbjct: 115 DDPADRQAARQRWRVYQAAGHTPHSHDL 142 >UniRef50_Q3II74 DNA polymerase III, chi subunit n=3 Tax=Alteromonadales RepID=Q3II74_PSEHT Length = 148 Score = 156 bits (394), Expect = 3e-37, Method: Composition-based stats. Identities = 62/144 (43%), Positives = 83/144 (57%), Gaps = 3/144 (2%) Query: 4 ATFYLL-DNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAE 62 A F++L D ++ L +IAA+++R G+RV I ++E A+ +DE LWA + Sbjct: 5 AQFFVLKQQDESLAKPDDHLALAAQIAADQYRLGQRVFICVDNENTAFAIDETLWAFDPD 64 Query: 63 SFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYEDS 122 SFVPHNL GEGP+GGAPVEI R +LI+L + DF F +V DFVP E Sbjct: 65 SFVPHNLQGEGPKGGAPVEIGT--TPPVGNRKVLINLANNLPDFIRRFNQVFDFVPVEAV 122 Query: 123 LKQLARERYKAYRVAGFNLNTATW 146 KQ ARER+K R G N+ T Sbjct: 123 AKQAARERFKKLRQLGANITTQDI 146 >UniRef50_A4SSA6 DNA polymerase III, chi subunit n=2 Tax=Aeromonas RepID=A4SSA6_AERS4 Length = 177 Score = 155 bits (393), Expect = 3e-37, Method: Composition-based stats. Identities = 68/145 (46%), Positives = 83/145 (57%), Gaps = 6/145 (4%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M TFYL++ SAVE+L C++AAE W +G + + C+DE QA RLDE LW P Sbjct: 27 MSQVTFYLMNEQD-DAQASAVERLACQLAAESWGAGH-LYLFCDDEAQALRLDELLWQLP 84 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 E FVPH L GE G APVEI + R LI+L FA F +VVDFVP + Sbjct: 85 PERFVPHQLQGE--SGQAPVEIGH--QPPKRRYARLINLARETPLFAGHFAQVVDFVPTD 140 Query: 121 DSLKQLARERYKAYRVAGFNLNTAT 145 ++ KQ ARERYK YR AG L Sbjct: 141 ETQKQQARERYKHYRQAGHALEMRD 165 >UniRef50_Q7NTZ0 DNA polymerase III, chi subunit n=2 Tax=Chromobacterium group RepID=Q7NTZ0_CHRVO Length = 141 Score = 153 bits (388), Expect = 1e-36, Method: Composition-based stats. Identities = 33/146 (22%), Positives = 53/146 (36%), Gaps = 9/146 (6%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY ++ + C +A R +R+LI + E+ LW+ Sbjct: 1 MSRIDFY--------TNVADPQAFACRLADTVQRKKERLLIWLDSERSVEVFSNRLWSFG 52 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 FVPH G PV +A S +L++L F +++ V + Sbjct: 53 DTRFVPHCRLGAPEAAETPVWLAASLPDDLSH-PVLLNLGPQLPFEFGRFERILEIVGRD 111 Query: 121 DSLKQLARERYKAYRVAGFNLNTATW 146 ARER++AYR G + Sbjct: 112 PESLATARERFRAYREHGCEIEHHDM 137 >UniRef50_Q7MHG2 DNA polymerase III, chi subunit n=15 Tax=Vibrionales RepID=Q7MHG2_VIBVY Length = 149 Score = 153 bits (387), Expect = 2e-36, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 76/147 (51%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M+ ATFY++ T V +A + G +V + E ++ A ++ E W Sbjct: 1 MQRATFYIVREHTPQATPEGFAHYVVFLAHHFAKQGAKVYLNGESKRHAEQIAEYFWQVE 60 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 FV HNL GEGP+ +EI + S R ++I+L + FA F EVVDFVP E Sbjct: 61 PAQFVAHNLVGEGPKYATNIEIGHEGVKPSWNRQLVINLAKNETTFANKFAEVVDFVPCE 120 Query: 121 DSLKQLARERYKAYRVAGFNLNTATWK 147 + KQLARERYK YR AG+ L T + Sbjct: 121 EKAKQLARERYKIYRQAGYQLQTIEIE 147 >UniRef50_A2SH60 DNA polymerase III, chi subunit n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SH60_METPP Length = 144 Score = 152 bits (385), Expect = 3e-36, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 57/152 (37%), Gaps = 14/152 (9%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M F+ G + C + + ++ G RV + ++ +LD LW Sbjct: 1 MTEINFHH--------GAADPLAHACRLLTKAYQRGARVAVTASSSERLAQLDVMLWTYD 52 Query: 61 AESFVPHNLAGEGPR-----GGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVD 115 +FVPH G P+ + + + ++L++L +F + + Sbjct: 53 PLAFVPHARLRAGAAPAERLAPTPIWL-LDRAADAPHHEVLVNLGPEVPAGFESFERLFE 111 Query: 116 FVPYEDSLKQLARERYKAYRVAGFNLNTATWK 147 V +D ++ R+R++ + G+ + + Sbjct: 112 IVGKDDEERRAGRQRWRYFESRGYEIRPHEVR 143 >UniRef50_A4BLM8 DNA polymerase III subunit chi n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BLM8_9GAMM Length = 144 Score = 152 bits (384), Expect = 4e-36, Method: Composition-based stats. Identities = 38/145 (26%), Positives = 58/145 (40%), Gaps = 8/145 (5%) Query: 2 KNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPA 61 FY+L +A E C + + +R G RV I D+ LD LW A Sbjct: 5 PRIDFYVLTT----VAAAARELFCCRLTEKAYRQGYRVFILTGDKALTQALDLQLWTFRA 60 Query: 62 ESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYED 121 SFVPH G+ PV + ++ D+LI+L + + + + V + Sbjct: 61 GSFVPHATLGQ--ADDEPVVLG--EQPPRLAVDLLINLAAHCPNHWQRLSRIAEIVTQQP 116 Query: 122 SLKQLARERYKAYRVAGFNLNTATW 146 +LARER++ YR G Sbjct: 117 ESLELARERFRCYRNDGAQPTYHRL 141 >UniRef50_A4VNZ8 DNA polymerase III, chi subunit n=2 Tax=Pseudomonas RepID=A4VNZ8_PSEU5 Length = 139 Score = 151 bits (382), Expect = 7e-36, Method: Composition-based stats. Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 7/146 (4%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY+L +D + + C++AA+ W+ G +V + C DE Q+ RLDE LW+ Sbjct: 1 MTRIEFYVLPDDNPL----GRLRAACQLAAKGWQHGLQVFVRCSDEDQSTRLDELLWSFR 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 AE F+PH E APV I Q+ +++ +LI+L + + F+ V++ V E Sbjct: 57 AERFIPHEQYAE--EVQAPVVIGLEQEPPTAQ-GLLINLAPTLSAHIDRFSRVIEIVNQE 113 Query: 121 DSLKQLARERYKAYRVAGFNLNTATW 146 L RE ++ YR G++ Sbjct: 114 PQLLTACRENFRLYRRQGYDPQRVEL 139 >UniRef50_Q47BG8 DNA polymerase III chi subunit, HolC n=1 Tax=Dechloromonas aromatica RCB RepID=Q47BG8_DECAR Length = 140 Score = 151 bits (381), Expect = 9e-36, Method: Composition-based stats. Identities = 33/146 (22%), Positives = 58/146 (39%), Gaps = 9/146 (6%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY G S C + + + K +L+ + + A +D LW Sbjct: 1 MTEVFFYH--------GASDKIAAACALLSGAYAKKKPMLVYTLEPEVASGIDRMLWTNA 52 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 A SFVPH A P+ IA + + + L++L + F +++ V + Sbjct: 53 ALSFVPHCRADSPLAAETPILIADTLETI-PQDERLMNLSQEIPPGFSRFHSLIEVVGQD 111 Query: 121 DSLKQLARERYKAYRVAGFNLNTATW 146 +S + AR+R K Y+ G+ + Sbjct: 112 ESDRLAARDRVKFYKDRGYEVRYFDL 137 >UniRef50_B4RWP0 DNA polymerase III chi subunit n=1 Tax=Alteromonas macleodii 'Deep ecotype' RepID=B4RWP0_ALTMD Length = 140 Score = 149 bits (378), Expect = 2e-35, Method: Composition-based stats. Identities = 49/142 (34%), Positives = 80/142 (56%), Gaps = 6/142 (4%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY L + + V E+ A + + +++ + C+ + QA +DE LW P Sbjct: 1 MPQVIFYQLTSSD-----NGVAGRASEVIASAFANKQKISVLCDTQAQAEEVDELLWQLP 55 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 A+ FVPHNL GEGP+ G PVEI W ++ +RR +++++ + +++DFVP + Sbjct: 56 ADRFVPHNLYGEGPQSGTPVEICWRPEQ-VARRQMVVNVGSGMVPSPNQHRQIIDFVPVD 114 Query: 121 DSLKQLARERYKAYRVAGFNLN 142 ++ KQ AR RYK Y+ AG N+ Sbjct: 115 ENAKQAARVRYKNYQQAGCNMQ 136 >UniRef50_C7RP73 DNA polymerase III chi subunit HolC n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RP73_9PROT Length = 141 Score = 149 bits (377), Expect = 2e-35, Method: Composition-based stats. Identities = 32/146 (21%), Positives = 55/146 (37%), Gaps = 9/146 (6%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY G S + + + K L+ D + A LD LW P Sbjct: 1 MTQVFFYH--------GASDRIVATATLLGKAFAQKKAALVYAPDAEVAAALDRHLWMHP 52 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 F+PH + G PV IA Q + + L +L + F +++ V ++ Sbjct: 53 PTGFLPHVRSDSPLAGETPVLIA-SQLDVVPQDERLFNLAAEVPPGFSRFASLIEVVGHQ 111 Query: 121 DSLKQLARERYKAYRVAGFNLNTATW 146 D + R+R + Y+ G+++ Sbjct: 112 DEERAAGRQRARFYKDRGYDITYVDL 137 >UniRef50_A1VP98 DNA polymerase III, chi subunit n=39 Tax=Burkholderiales RepID=A1VP98_POLNA Length = 146 Score = 149 bits (377), Expect = 3e-35, Method: Composition-based stats. Identities = 34/148 (22%), Positives = 51/148 (34%), Gaps = 12/148 (8%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M F+ + C + + + SG V + E + LD LW+ Sbjct: 1 MTEIAFH--------FNVPDKLAYGCRLLRKAYLSGATVAVIAE-PEVLAELDALLWSFS 51 Query: 61 AESFVPHNL--AGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVP 118 A FVPH A G PV +A RDIL++L F +++ V Sbjct: 52 ATEFVPHCTGAASPGTLAATPVVLAAS-PADCPGRDILVNLGQGVPGGFEGFERLIEVVS 110 Query: 119 YEDSLKQLARERYKAYRVAGFNLNTATW 146 R+R+K Y G+ L Sbjct: 111 IHPEDVPAGRDRWKHYAARGYTLKRHDL 138 >UniRef50_Q5QY16 DNA polymerase III chi subunit n=2 Tax=Idiomarina RepID=Q5QY16_IDILO Length = 149 Score = 149 bits (376), Expect = 3e-35, Method: Composition-based stats. Identities = 53/148 (35%), Positives = 84/148 (56%), Gaps = 6/148 (4%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M +ATF+L+ ++ + +L+C+ A+ +R K++ + +++QA LDE LW +P Sbjct: 1 MSSATFFLMPDEAEDEQ----NRLICDKIAQLYRKHKKLRVWARNQQQAEALDELLWQQP 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRD--ILISLRTSFADFATAFTEVVDFVP 118 +++F+PHNL GEGP GAPVE WP+ + R L +L A ++ D VP Sbjct: 57 SDAFIPHNLHGEGPATGAPVEFCWPEADAVKNRPGYALFNLAEEIPVQAQQSQQLYDIVP 116 Query: 119 YEDSLKQLARERYKAYRVAGFNLNTATW 146 +D+ K+ ARERYK YR G + T Sbjct: 117 ADDNGKKTARERYKHYRARGCQMQTEPL 144 >UniRef50_C3X5D7 DNA polymerase III chi subunit n=2 Tax=Oxalobacter formigenes RepID=C3X5D7_OXAFO Length = 141 Score = 148 bits (374), Expect = 5e-35, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 56/145 (38%), Gaps = 10/145 (6%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERW--RSGKRVLIACEDEKQAYRLDEALWA 58 M F ++ C + + R++I D RLD+ALW Sbjct: 1 MTKIEF--------RTHIADKINYTCRWVRKAFLNAPDSRIVILSSDRNLLNRLDDALWT 52 Query: 59 RPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVP 118 F+PH + G+ +PV + + + IL++L + F +++ V Sbjct: 53 FSDSDFLPHAMLGDRLASRSPVLLTYDDQCEMPHHQILVNLSPAIPACYARFDRLIELVS 112 Query: 119 YEDSLKQLARERYKAYRVAGFNLNT 143 E + + R+RY YR G+ L+ Sbjct: 113 TETADTEAGRQRYVHYRERGYALHH 137 >UniRef50_UPI0000E0E595 DNA polymerase III subunit chi n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0E595 Length = 151 Score = 147 bits (371), Expect = 1e-34, Method: Composition-based stats. Identities = 48/142 (33%), Positives = 74/142 (52%), Gaps = 3/142 (2%) Query: 1 MKNATFYLL-DNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWAR 59 M A FY L + D T S++ L C++ A + KR+ + C D+ QA + LW Sbjct: 1 MTQANFYQLTEQDGTGFDASSIAVLACDLVARCYGEKKRLTVLCTDQAQAEAFSDLLWQH 60 Query: 60 PAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPY 119 P E F+ HN+AGEGP GGA VE+ W + R I++++ + + DFVP Sbjct: 61 PPERFIAHNIAGEGPHGGAAVEVTWGNQSPI--RSIVVNVAALQIPNPERYHTIYDFVPV 118 Query: 120 EDSLKQLARERYKAYRVAGFNL 141 ++ K AR+RY ++ AG + Sbjct: 119 AEADKIRARQRYAFFKRAGCQM 140 >UniRef50_A4BBY3 DNA polymerase III subunit chi n=1 Tax=Reinekea blandensis MED297 RepID=A4BBY3_9GAMM Length = 140 Score = 145 bits (367), Expect = 4e-34, Method: Composition-based stats. Identities = 33/147 (22%), Positives = 62/147 (42%), Gaps = 8/147 (5%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M F++L + SA V +A + +VLIA ++ + +ALW+ Sbjct: 1 MTKIDFHILPSADD----SATYHYVARLANKARGKAHQVLIAVNSSEELEPVSQALWSVS 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 +SF+ H P P+++ ++ D+LI+L F + F V++ V + Sbjct: 57 PDSFLAHTNCATAPF---PLQLTASEEC-GDHHDVLINLCHETPTFFSRFKRVIEVVSQD 112 Query: 121 DSLKQLARERYKAYRVAGFNLNTATWK 147 Q +R RY+ Y G+ + + Sbjct: 113 PIRLQASRSRYRDYSDNGYPIERFDLR 139 >UniRef50_Q5NXM0 DNA polymerase III, chi subunit n=2 Tax=Rhodocyclaceae RepID=Q5NXM0_AZOSE Length = 145 Score = 145 bits (366), Expect = 4e-34, Method: Composition-based stats. Identities = 36/146 (24%), Positives = 54/146 (36%), Gaps = 9/146 (6%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY L CE+AA + SG+RV + A LD+ LW+ Sbjct: 1 MARVQFYH--------NAENPLALACELAARAYASGRRVAVRVPGPAAARELDQLLWSFE 52 Query: 61 AESFVPHNLAGEGPRGGAPVEIA-WPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPY 119 FVPH +A PV I + ++L +L F +V+ V Sbjct: 53 PLLFVPHVMADAPLAARTPVVIGDAARTTRWPHAELLFNLADDIPPDFERFRMLVEIVGQ 112 Query: 120 EDSLKQLARERYKAYRVAGFNLNTAT 145 +++K AR R+ Y+ L Sbjct: 113 SEAMKIPARARWAHYKQRELPLQAFD 138 >UniRef50_Q7VQT1 DNA polymerase III, chi subunit n=2 Tax=Candidatus Blochmannia RepID=Q7VQT1_BLOFL Length = 153 Score = 144 bits (365), Expect = 7e-34, Method: Composition-based stats. Identities = 62/146 (42%), Positives = 83/146 (56%), Gaps = 2/146 (1%) Query: 2 KNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPA 61 K TFYLL + L+ +EQLVC + WR GK +LI C+ QA +++EALW Sbjct: 4 KQGTFYLLPFIHHKNDLNTIEQLVCHLTKIHWRLGKTILITCDTHDQAKKINEALWNFEK 63 Query: 62 ESFVPHNLAGEGPRGGAPVEIAWPQKR-SSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 SF+PH L + P+ I W Q + R+ LI+L +F F E++DFVP E Sbjct: 64 NSFLPHGLFSKNT-YNIPITIYWSQCCYDNKYRNTLINLMQKNKNFFLNFHEIIDFVPNE 122 Query: 121 DSLKQLARERYKAYRVAGFNLNTATW 146 D+LK+LAR RYK+YR GFNL T Sbjct: 123 DNLKKLARIRYKSYRSLGFNLKTTHI 148 >UniRef50_C9YBH7 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YBH7_9BURK Length = 144 Score = 144 bits (364), Expect = 8e-34, Method: Composition-based stats. Identities = 32/148 (21%), Positives = 58/148 (39%), Gaps = 10/148 (6%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M + F+ G + V + + G R+ + Q LD +LWA Sbjct: 1 MTDIAFH--------FGAPNKLEYVGRLLRKAVARGARLTVLAP-PAQVQYLDASLWATS 51 Query: 61 AESFVPHNLA-GEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPY 119 F+ H + G+ P PV + + +L++L T+ F V++ V Sbjct: 52 PTDFLVHAVDDGQAPHAMCPVVLTSRVHGALKNHSVLVNLTTAVPADFVQFERVIEVVSV 111 Query: 120 EDSLKQLARERYKAYRVAGFNLNTATWK 147 +D + LAR R++ Y + G+ + K Sbjct: 112 DDDDRALARNRWRHYVLQGYEIQRHDLK 139 >UniRef50_C4KAG2 DNA polymerase III chi subunit HolC n=1 Tax=Thauera sp. MZ1T RepID=C4KAG2_THASP Length = 146 Score = 144 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 40/147 (27%), Positives = 55/147 (37%), Gaps = 9/147 (6%) Query: 2 KNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPA 61 FY L E+AA G++V + C D Q RLD+ALW Sbjct: 3 PRVQFYH--------NTPDRLALAHELAAGAHARGRKVALRCTDATQLRRLDQALWTAVP 54 Query: 62 ESFVPHNLAGEGPRGGAPVEIA-WPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 FVPH G PV + + D+L +L A F VV+ V + Sbjct: 55 LDFVPHVGVGSALAAETPVVLGAAGEPCPWPHADMLFNLADDVPAEAEGFRMVVEIVGRD 114 Query: 121 DSLKQLARERYKAYRVAGFNLNTATWK 147 + AR R+ AYR G+ L + Sbjct: 115 AAEVHAARLRWAAYRQRGYELKAFDAE 141 >UniRef50_A1WUV2 DNA polymerase III chi subunit, HolC n=1 Tax=Halorhodospira halophila SL1 RepID=A1WUV2_HALHL Length = 140 Score = 144 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 8/143 (5%) Query: 5 TFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESF 64 FY+LD G + E+ C +A + + +G VL+ ED++Q RLD LW SF Sbjct: 2 DFYILDGP----GEAPRERFACRLAEKAYENGYGVLLLTEDDEQTERLDALLWTFRQGSF 57 Query: 65 VPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYEDSLK 124 VPH R G PV + + + +LI+L A + + V +++ Sbjct: 58 VPHATL--AARDGEPVAVGGDEHAADDA--VLINLTDRTPATWQARQRIAEVVDQREAVL 113 Query: 125 QLARERYKAYRVAGFNLNTATWK 147 + +R+RY+ Y+ AG +T + Sbjct: 114 RASRQRYRIYKEAGCEPHTHRIE 136 >UniRef50_C6MGG5 DNA polymerase III chi subunit HolC n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MGG5_9PROT Length = 159 Score = 143 bits (362), Expect = 1e-33, Method: Composition-based stats. Identities = 39/148 (26%), Positives = 60/148 (40%), Gaps = 11/148 (7%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY G + Q C + A+ + RVLI K +LD+ LW Sbjct: 14 MTQILFY--------SGSNNKLQTTCRLCAKAIQQHMRVLIYVPASKLLDQLDQLLWTFS 65 Query: 61 AESFVPHN--LAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVP 118 + SF+PH L PV ++ Q + +S D+LI+L F +++ Sbjct: 66 STSFIPHCNILDDAKLVSATPVILS-GQIQVNSPFDVLINLHDQSPHLFDQFDRLIEIAG 124 Query: 119 YEDSLKQLARERYKAYRVAGFNLNTATW 146 K ARERY+ Y+ AG+ + Sbjct: 125 TSHEDKLAARERYRFYKNAGYEIQHYHL 152 >UniRef50_B0SWN1 DNA polymerase III chi subunit HolC n=6 Tax=Alphaproteobacteria RepID=B0SWN1_CAUSK Length = 153 Score = 142 bits (360), Expect = 2e-33, Method: Composition-based stats. Identities = 32/140 (22%), Positives = 52/140 (37%), Gaps = 9/140 (6%) Query: 4 ATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAES 63 FY L+ L E+ + G R L+ D + LD LW +S Sbjct: 8 IWFYHLERSALEQVLP-------ELLEKTLGRGWRALVRGGDPARLRALDAHLWTWRDDS 60 Query: 64 FVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVP-YEDS 122 F+PH L E PV + + L L + + F + ++ Sbjct: 61 FLPHGLDDEPMADRQPVLLTDKLDNPNGG-QALFLLDGAEPGDLSGFERCILLFDGRDEE 119 Query: 123 LKQLARERYKAYRVAGFNLN 142 +LAR R+KA++ AG ++ Sbjct: 120 ALRLARGRWKAFKGAGHPVS 139 >UniRef50_A8PP43 DNA polymerase III, chi subunit n=1 Tax=Rickettsiella grylli RepID=A8PP43_9COXI Length = 146 Score = 141 bits (357), Expect = 5e-33, Method: Composition-based stats. Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 5/146 (3%) Query: 2 KNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPA 61 FYLL+ + C + + + K++ I ++ R DE LW Sbjct: 4 TTIDFYLLNT----VFQEDRYRFSCRLIDKAFLQHKKIFIQVNTAEEGQRFDELLWTFRD 59 Query: 62 ESFVPHNLAGEGPRGGAPVEIAWPQKRSSS-RRDILISLRTSFADFATAFTEVVDFVPYE 120 SF+PH + + + DIL++L T D+ + F+ +++ V E Sbjct: 60 ISFIPHRYLEVDSSIDPLLTVHIAVNKPVELHADILLNLSTRVPDYFSTFSRIIEVVSEE 119 Query: 121 DSLKQLARERYKAYRVAGFNLNTATW 146 + K +R++YK Y+ +L T Sbjct: 120 NENKNQSRQKYKFYKTQQCHLMTHHI 145 >UniRef50_C6WT44 DNA polymerase III chi subunit HolC n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WT44_METML Length = 140 Score = 139 bits (350), Expect = 3e-32, Method: Composition-based stats. Identities = 34/145 (23%), Positives = 59/145 (40%), Gaps = 9/145 (6%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M F+ + V E+ +++ I +D+ + + LW Sbjct: 1 MTRVEFF--------FNVPDKLAKVAELCDRAVAKRRQLTIFTQDDVMSANVQALLWQHS 52 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 A SF+P G + + I + + DILI+L+ F + F +V+ V + Sbjct: 53 ATSFLPSAYPGSPEQDDVAI-IVDKEGTQLLQDDILINLKAEHPPFFSRFKYLVELVGAD 111 Query: 121 DSLKQLARERYKAYRVAGFNLNTAT 145 D+ K LAR RYK YR G+ + + Sbjct: 112 DADKALARARYKFYRDRGYQIKSTD 136 >UniRef50_A5EVT2 DNA polymerase III chi subunit n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EVT2_DICNV Length = 141 Score = 138 bits (349), Expect = 4e-32, Method: Composition-based stats. Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 6/139 (4%) Query: 6 FYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFV 65 FY+L++ T ++A VC + + + + + C DE A +L+ LW+ AESF+ Sbjct: 5 FYVLNSQT----IAARLHFVCRLCEKAMAARQHTAVLCADEAMAAQLNALLWSFRAESFI 60 Query: 66 PHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISL-RTSFADFATAFTEVVDFVPYEDSLK 124 PH L+ + A V + +R++ + ++ I+L D V + V ++ Sbjct: 61 PHALSDDALAAHAAVMLLIAPERAA-QTNVFINLSADELPDIPQGCQRVFEVVDQSPAVL 119 Query: 125 QLARERYKAYRVAGFNLNT 143 + R R+K YR G T Sbjct: 120 AVTRRRFKHYRARGITPET 138 >UniRef50_C1D7G5 HolC n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D7G5_LARHH Length = 140 Score = 138 bits (348), Expect = 5e-32, Method: Composition-based stats. Identities = 31/146 (21%), Positives = 53/146 (36%), Gaps = 9/146 (6%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY ++ C++ G+R+ + DE D LW+ P Sbjct: 1 MTRVDFYH--------HVADPLSFACKLTRTVIGKGERLTVLFADEAALGAFDTRLWSVP 52 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 A+ FVPH + PV +A +L++L A+ +++ V + Sbjct: 53 AQGFVPHVRLDDPLAAETPVLLATSLPE-VPPTGVLLNLSLGEPAGFPAWPRILEIVGED 111 Query: 121 DSLKQLARERYKAYRVAGFNLNTATW 146 ARE +AY+ AG + Sbjct: 112 AGQLDRAREVARAYKRAGLDTVYHDM 137 >UniRef50_Q3BP99 DNA polymerase III holoenzyme chi subunit n=25 Tax=Xanthomonadaceae RepID=Q3BP99_XANC5 Length = 141 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 47/147 (31%), Positives = 73/147 (49%), Gaps = 7/147 (4%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M A FYL+ L+ +LVCE+A + + LI D +QA LD+ LWA Sbjct: 1 MPRADFYLI---AKPRFLNEPLRLVCELARKANDANLPTLILARDTQQAEALDDLLWAFD 57 Query: 61 AESFVPHNLAGEGPRGG-APVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPY 119 E++VPH +AG APV IA + ++ R ++I+LR + A V++ VP Sbjct: 58 DEAYVPHQIAGTDEEDELAPVLIAA-PEFAAPSRPLVINLRDD--PYLGACDRVLEVVPA 114 Query: 120 EDSLKQLARERYKAYRVAGFNLNTATW 146 + + ++ RER+K Y+ G L Sbjct: 115 DPAAREPLRERWKQYKALGLELTKYDM 141 >UniRef50_B4RJ23 HolC n=19 Tax=Neisseria RepID=B4RJ23_NEIG2 Length = 166 Score = 136 bits (342), Expect = 3e-31, Method: Composition-based stats. Identities = 37/151 (24%), Positives = 60/151 (39%), Gaps = 12/151 (7%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M TFY + + C + A R G R+L+ + + LD+ LW Sbjct: 21 MPKVTFY--------THVDQIPLFTCRLIARAIRDGGRILVWSDSFGRLQELDKMLWQYE 72 Query: 61 AESFVPHNLA--GEGPRGGAPVEIAWPQKRSSSRRDI-LISLRTSFADFATAF-TEVVDF 116 AESF+PH + E V +A + +++L F + A+ V++ Sbjct: 73 AESFIPHEIWETEEAMPSDTSVLLACGGNLPRIPEGMAVLNLSDGFWNTASVLPARVLEI 132 Query: 117 VPYEDSLKQLARERYKAYRVAGFNLNTATWK 147 V ARER+ AYR +GF + + Sbjct: 133 VGNSLEDLADARERFTAYRRSGFAIEHHGME 163 >UniRef50_Q0AB76 DNA polymerase III chi subunit, HolC n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AB76_ALHEH Length = 146 Score = 135 bits (341), Expect = 4e-31, Method: Composition-based stats. Identities = 40/145 (27%), Positives = 59/145 (40%), Gaps = 8/145 (5%) Query: 4 ATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKR-VLIACEDEKQAYRLDEALWARPAE 62 FY+L+ T E+ CE+ A+ G R + I D +QA RLD LW E Sbjct: 9 VRFYVLNRATDPV---QRERFACELVAKGLEHGVRHIHIQVHDPQQARRLDTLLWTFRKE 65 Query: 63 SFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYEDS 122 SF+PH + E PV I + +LI+L TAF V + V + Sbjct: 66 SFIPHAVQAE--AEDEPVVIGDRPEPRPDA--LLINLAADIPPEWTAFGRVFEVVVQDPE 121 Query: 123 LKQLARERYKAYRVAGFNLNTATWK 147 + R ++ Y+ AG + Sbjct: 122 ILHTTRSHFRTYQQAGVTPEKHDVR 146 >UniRef50_B8GVQ9 DNA polymerase III, chi subunit n=3 Tax=Caulobacter RepID=B8GVQ9_CAUCN Length = 153 Score = 135 bits (341), Expect = 4e-31, Method: Composition-based stats. Identities = 31/147 (21%), Positives = 55/147 (37%), Gaps = 13/147 (8%) Query: 1 MK----NATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEAL 56 M FY L+ L E+ + G + L+ D ++ LD+ L Sbjct: 1 MTANPCEVWFYHLERSPLEAVLP-------ELLEKTLGRGWKALVRGGDPRRIEALDQHL 53 Query: 57 WARPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDF 116 W +SF+PH LA E PV + + +S D L + + + + + Sbjct: 54 WTWREDSFLPHGLASEPMAERQPVLLTAAEGNPNSG-DALFLIDGAEPGDLSGVSRCILL 112 Query: 117 VP-YEDSLKQLARERYKAYRVAGFNLN 142 +D AR R+ ++ AG ++ Sbjct: 113 FDGRDDQALAQARGRWSTFKKAGHPVS 139 >UniRef50_A0LB28 DNA polymerase III, chi subunit n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LB28_MAGSM Length = 157 Score = 135 bits (340), Expect = 5e-31, Method: Composition-based stats. Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 8/140 (5%) Query: 3 NATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAE 62 FY L D+ E+ + +I + + G RV I ED +QA LDE LW P + Sbjct: 10 RVRFYQLATDS-------RERALLKILNKVYGMGLRVCIVVEDRQQAQGLDEHLWRHPPD 62 Query: 63 SFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYEDS 122 SF+PH + + P+ I+ + +++ L + F VVDFVP + Sbjct: 63 SFLPHATSVDPFPEAQPILISEQPVDPNGAT-VVVMLTPVPLENLDQFDTVVDFVPDDPQ 121 Query: 123 LKQLARERYKAYRVAGFNLN 142 K+ +R RYK Y+ A + Sbjct: 122 AKRASRLRYKHYKDAQCQME 141 >UniRef50_C5CLU6 DNA polymerase III subunit chi n=7 Tax=Comamonadaceae RepID=C5CLU6_VARPS Length = 147 Score = 134 bits (339), Expect = 6e-31, Method: Composition-based stats. Identities = 26/149 (17%), Positives = 52/149 (34%), Gaps = 12/149 (8%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M F+ L C + + ++ + + +D ALW Sbjct: 1 MTEIGFH--------FNLPDKANYACRLVRKAVSVRGLRVVVVGEPQMLEAVDAALWQLS 52 Query: 61 AESFVPHNLAGEGPR--GGAPVEIAWPQKRSSS--RRDILISLRTSFADFATAFTEVVDF 116 F+ H P +PV + ++ R++L++L + F +VD Sbjct: 53 PCDFIAHCRGDAQPHLVARSPVILCAEGADAAGLAHREMLVNLGPTVPVGFERFERLVDI 112 Query: 117 VPYEDSLKQLARERYKAYRVAGFNLNTAT 145 V E +Q+ R R++ Y G+++ Sbjct: 113 VSNETDDRQIGRSRWRHYADRGYSIQPHD 141 >UniRef50_C5SNX1 DNA polymerase III chi subunit HolC n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SNX1_9CAUL Length = 149 Score = 133 bits (335), Expect = 2e-30, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 55/142 (38%), Gaps = 9/142 (6%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY L+ L + + + G + + E LD+ LWA Sbjct: 1 MTQVWFYHLERTPLRAALPD-------LLEKTLQKGWKAYVLGEAGDMLVGLDQHLWAYR 53 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTE-VVDFVPY 119 E+F+PH L E PV + +++ D+L S+ + + ++ F Sbjct: 54 DEAFLPHGLESEPEAARQPVLLGDSG-GNANAADVLFSVSAMNLPELSPYQRCLILFEGQ 112 Query: 120 EDSLKQLARERYKAYRVAGFNL 141 +++ AR ++KA + +L Sbjct: 113 DETHLNWARAQWKALKARNLDL 134 >UniRef50_A4SWH8 DNA polymerase III chi subunit, HolC n=18 Tax=Burkholderiaceae RepID=A4SWH8_POLSQ Length = 155 Score = 132 bits (333), Expect = 4e-30, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 53/158 (33%), Gaps = 21/158 (13%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERW---RSGKRV--LIACEDEKQAYRLDEA 55 M F+ + + VC + + W G V ++ D+ +LD Sbjct: 1 MARIDFH--------SNVGDKLEYVCRLIRKIWSATAEGHPVRQIVIVGDKGDLQKLDSL 52 Query: 56 LWARPAESFVPHNLAGEGPRGGAPVEIAWP----QKRSSSRRDILISLRTSFADFA---- 107 LW F+PH P+ +A D+LI + Sbjct: 53 LWTFSTTDFLPHCSINHEAAAETPIVLADDFASTAFSQIPHADVLIHIGVKMPPDVLGLV 112 Query: 108 TAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNLNTAT 145 F +V+ V ++ + RER+KAYR G L+ Sbjct: 113 ERFPRIVEVVTVNEAERLAGRERFKAYRALGHELHNFD 150 >UniRef50_Q2RS95 DNA polymerase III, chi subunit n=6 Tax=Alphaproteobacteria RepID=Q2RS95_RHORT Length = 160 Score = 130 bits (328), Expect = 1e-29, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 55/144 (38%), Gaps = 11/144 (7%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY L T D L + A + +R ++ ++ L+ LW Sbjct: 1 MSRFDFYHLQRSTLEDALP-------RLLARVRKGDQRAVVMAGSPERVDGLNSLLWTFD 53 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFAD-FATAFTEVVDFVP- 118 A S++PH A +G PV + ++ + ++L+ L F ++ Sbjct: 54 AGSWLPHGTARDGDGADQPVWLTIDEENPNG-AEVLV-LTDGVWPSDPARFARILLLFDG 111 Query: 119 YEDSLKQLARERYKAYRVAGFNLN 142 +DS AR +KA R G L+ Sbjct: 112 GDDSAVARARGHWKAMRENGHELH 135 >UniRef50_C5TNX8 DNA polymerase III chi subunit n=8 Tax=Neisseriaceae RepID=C5TNX8_NEIFL Length = 146 Score = 130 bits (328), Expect = 1e-29, Method: Composition-based stats. Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 12/148 (8%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M ATFY ++ C + R G ++L+ + +LD LW + Sbjct: 1 MPKATFY--------THVAQPAAFACRLITRAIRDGGQILVWSDSAAAVQQLDVDLWQQI 52 Query: 61 AESFVPHNLA--GEGPRGGAPVEIAWPQKRSSSRRDI-LISLRTSFADFATA-FTEVVDF 116 ESF+PH + + PV +A+ + +D +++L F A A +++ Sbjct: 53 PESFIPHEVWLPTDPMPSETPVLLAFGNALPNIPQDCTVLNLSADFWSQAPAIPNRILEI 112 Query: 117 VPYEDSLKQLARERYKAYRVAGFNLNTA 144 V AR+R++AYR +GF + Sbjct: 113 VGNSLEDLAEARDRFRAYRQSGFEIEHF 140 >UniRef50_A3M1A7 DNA polymerase III chi subunit n=18 Tax=Acinetobacter RepID=A3M1A7_ACIBT Length = 135 Score = 130 bits (327), Expect = 1e-29, Method: Composition-based stats. Identities = 32/146 (21%), Positives = 58/146 (39%), Gaps = 11/146 (7%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M +FYL + S C + + ++ C D + LDE LW+ Sbjct: 1 MAKVSFYLFETSEERQVDS-----ACRLCRKILLKHSQIWWYCPDVQLQQTLDEKLWSFD 55 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 SF+ H + + A V I+ Q S + ++ + + F+ +++ V Sbjct: 56 PTSFIAHGV----DQVDAAVCISAKQ--PSEQGWLVFNFNNHALEQVNHFSHIIEIVENN 109 Query: 121 DSLKQLARERYKAYRVAGFNLNTATW 146 ++ KQ+ RE++K YR G T Sbjct: 110 EAAKQIGREKFKMYRRLGIEPRTFKL 135 >UniRef50_B5EKZ3 DNA polymerase III chi subunit HolC n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EKZ3_ACIF5 Length = 141 Score = 129 bits (326), Expect = 2e-29, Method: Composition-based stats. Identities = 36/147 (24%), Positives = 57/147 (38%), Gaps = 7/147 (4%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M A+FY L +C + A+ W+ I C D + LD+ LW Sbjct: 1 MPVASFYTLPPTLLTAHEQRRG--MCRVIAKVWQVMGEADILCPDTEAGQTLDDLLWTFQ 58 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 A +FVPH G PV I + +++ ++DF+P Sbjct: 59 AGAFVPHARG-----AGEPVRIHENGAWPLQGKALVLCGLDKLPAPLPPCERLIDFIPVA 113 Query: 121 DSLKQLARERYKAYRVAGFNLNTATWK 147 + L+ ARERY+ + AGF + + Sbjct: 114 EQLRGFARERYRQLKNAGFTMQVHPLE 140 >UniRef50_Q1QKW7 DNA polymerase III, chi subunit n=13 Tax=Alphaproteobacteria RepID=Q1QKW7_NITHX Length = 151 Score = 129 bits (326), Expect = 2e-29, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 45/143 (31%), Gaps = 8/143 (5%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY L N L + + G R ++ E++A LD LW Sbjct: 1 MTEVLFYHLQNMALESVLPP-------LLEKTIERGWRAVVHTTSEERADALDAYLWTYR 53 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 ++F+PH P+ + + + + A+ +V + Sbjct: 54 DDAFLPHATWRIEDASEQPILLTIDGHNPNRATVRFLIDSAPLPENPEAYERLVLVFDGD 113 Query: 121 DS-LKQLARERYKAYRVAGFNLN 142 D AR + + GF + Sbjct: 114 DGIALDAARSVWTECKARGFEVT 136 >UniRef50_B9MJ45 DNA polymerase III chi subunit HolC n=3 Tax=Comamonadaceae RepID=B9MJ45_DIAST Length = 146 Score = 129 bits (324), Expect = 3e-29, Method: Composition-based stats. Identities = 34/149 (22%), Positives = 56/149 (37%), Gaps = 13/149 (8%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M F+ VC + + R RV + D RLD LWA Sbjct: 1 MTQVAFH--------FNAPDKLAYVCRLVRKATRQEARVTV-TGDADTLLRLDRQLWALA 51 Query: 61 AESFVPHNLAGEGPR--GGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVP 118 FV H L +P + R+S RD+L++L + + VV+ V Sbjct: 52 PSDFVGHCLGDADEEILRASPTVL-VQDPRTSPNRDVLVNLGNVLPEGFAQYARVVEVVS 110 Query: 119 Y-EDSLKQLARERYKAYRVAGFNLNTATW 146 ++ ++ ARER++ Y G+++ Sbjct: 111 QADEDDRKRARERWRGYAALGYDIVRHDL 139 >UniRef50_Q11HH6 DNA polymerase III, chi subunit n=75 Tax=Alphaproteobacteria RepID=Q11HH6_MESSB Length = 172 Score = 128 bits (323), Expect = 5e-29, Method: Composition-based stats. Identities = 32/141 (22%), Positives = 49/141 (34%), Gaps = 9/141 (6%) Query: 3 NATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAE 62 FY L T + L + + G RV I E++ LD LW + Sbjct: 17 EVLFYHLTESTLEEALPP-------LVEKSLERGWRVGIQTASEERRDALDACLWTFRDD 69 Query: 63 SFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTE-VVDFVPYED 121 SFVPH E PV + + I + + + V F ++ Sbjct: 70 SFVPHATDREPHAAEQPVILTTAPANPNG-ASIRFLVEGAEPGSLDGYQRAVFLFDGHDT 128 Query: 122 SLKQLARERYKAYRVAGFNLN 142 S AR +KA + AG ++ Sbjct: 129 SQLDAARAHWKAMKAAGHDVT 149 >UniRef50_B1Y7A4 DNA polymerase III chi subunit HolC n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y7A4_LEPCP Length = 145 Score = 128 bits (322), Expect = 7e-29, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 58/152 (38%), Gaps = 15/152 (9%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M F+ + + C + + R+G RV + D LD LW Sbjct: 3 MGAVAFH--------FNVPQRQDYTCRLLRKACRAGARVAV-TGDSAALGELDRQLWIFD 53 Query: 61 AESFVPH--NLAGEGPRGG---APVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVD 115 FVPH ++ + P+ + Q + + D+L++L D A+ F V++ Sbjct: 54 PIDFVPHWRGVSADRLPARLKATPIVL-LDQAGTQAGHDVLLNLAEQVPDCASQFARVIE 112 Query: 116 FVPYEDSLKQLARERYKAYRVAGFNLNTATWK 147 V ++ + AR R++ Y G + + Sbjct: 113 VVGRSEADRSQARLRWRHYASLGAAIERHEVR 144 >UniRef50_A1TZ87 DNA polymerase III chi subunit, HolC n=3 Tax=Marinobacter RepID=A1TZ87_MARAV Length = 169 Score = 127 bits (321), Expect = 8e-29, Method: Composition-based stats. Identities = 34/146 (23%), Positives = 62/146 (42%), Gaps = 6/146 (4%) Query: 3 NATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAE 62 F++L +T +A ++ + W+ G RV + C+ E+QA LD+ LW E Sbjct: 27 RYWFHILAQNTH----AARNLHAAKLVDKAWQQGDRVCVLCDTEEQALELDDLLWNFTPE 82 Query: 63 SFVPHNLAGEGPRGGA-PVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYED 121 +F+PH++A + PV I + D +I L ++ + A + + + Sbjct: 83 AFIPHSIAKAATTPCSDPVGILLYPPAAVD-WDTVIVLSSALPEDADQYRRLALVAHNDP 141 Query: 122 SLKQLARERYKAYRVAGFNLNTATWK 147 ++ AR YK R G + Sbjct: 142 AVLNQARGHYKQLRSLGIEARVHDMR 167 >UniRef50_Q0G6N2 DNA polymerase III subunit chi n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G6N2_9RHIZ Length = 150 Score = 126 bits (318), Expect = 2e-28, Method: Composition-based stats. Identities = 32/143 (22%), Positives = 55/143 (38%), Gaps = 8/143 (5%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY L D L E+ G RV++ C E++ LD LW Sbjct: 1 MAEVLFYHLTESRLEDALP-------ELLQRSLARGWRVVVQCTSEERRDSLDNVLWTFS 53 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTE-VVDFVPY 119 ESF+PH E P+ + + +++ D+ + + T + V F + Sbjct: 54 EESFLPHGTDAEAHPESQPILLTTRADQFANKPDVRFMVDGATPGDLTGYIRGVYMFDAF 113 Query: 120 EDSLKQLARERYKAYRVAGFNLN 142 + ARE+++ + AG + Sbjct: 114 DTDQMAHAREQWQVEKSAGHEVT 136 >UniRef50_Q31ET2 DNA polymerase III, chi subunit n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31ET2_THICR Length = 146 Score = 126 bits (318), Expect = 2e-28, Method: Composition-based stats. Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 8/146 (5%) Query: 2 KNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPA 61 K+ FY+L DT E + ++ + R +R I E + R D +LW Sbjct: 9 KDVIFYVLGTDTAQQ----REAFMAKLVNKIHREKRRCDIRFASEDEMTRFDLSLWQYQP 64 Query: 62 ESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYED 121 E+F+PH++ AP+++ W + ++ +D+L+++ F + ++ + + Sbjct: 65 EAFIPHSVQQTV---QAPIQL-WADQIATPCQDVLLNVHPDFPQNFQLYNRTIEVLDQTE 120 Query: 122 SLKQLARERYKAYRVAGFNLNTATWK 147 L Q+ RER+KAY+ G K Sbjct: 121 HLIQMGRERWKAYKKEGLEPTVHKIK 146 >UniRef50_C7I265 DNA polymerase III chi subunit HolC n=1 Tax=Thiomonas intermedia K12 RepID=C7I265_THIIN Length = 141 Score = 125 bits (314), Expect = 6e-28, Method: Composition-based stats. Identities = 35/126 (27%), Positives = 50/126 (39%), Gaps = 2/126 (1%) Query: 17 GLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPRG 76 L + C + + G RVL+A + LD LW SFVPH + Sbjct: 10 NLPDPLRYACGLLRTATQRGARVLVAAPEP-LLTELDPLLWTFQPGSFVPHVWQDDPLAD 68 Query: 77 GAPVEIAWPQKRSSSRR-DILISLRTSFADFATAFTEVVDFVPYEDSLKQLARERYKAYR 135 PV +A + R L++L + V++ V K ARER +AYR Sbjct: 69 KTPVILAPLPDLPRAGRVTALVNLGPDLVTGWESLERVIELVSENGPDKPAARERLRAYR 128 Query: 136 VAGFNL 141 AGF+ Sbjct: 129 AAGFDP 134 >UniRef50_C6NVB1 DNA polymerase III chi subunit n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NVB1_9GAMM Length = 143 Score = 123 bits (309), Expect = 2e-27, Method: Composition-based stats. Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 11/150 (7%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M +A+FY L + + VC + A+ W+ +V I C DE+ A +D+ LW Sbjct: 1 MPSASFYRLPANLLTATEQ--HRAVCRVVAKAWQVLGQVNILCRDEELAESMDDLLWTYQ 58 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRS---SSRRDILISLRTSFADFATAFTEVVDFV 117 A +F PH PV + S + L+ LR ++DF+ Sbjct: 59 AGAFTPHGRD-----PQEPVCLYAGTDASVLRPAPALALVGLR-ELPGNLPDAARLLDFI 112 Query: 118 PYEDSLKQLARERYKAYRVAGFNLNTATWK 147 P ++S AR+RY+ R AG+ + T T + Sbjct: 113 PPDESGVADARQRYRILREAGYTIQTYTLE 142 >UniRef50_D2LDM3 DNA polymerase III chi subunit HolC n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LDM3_RHOVA Length = 158 Score = 123 bits (309), Expect = 2e-27, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 54/142 (38%), Gaps = 9/142 (6%) Query: 2 KNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPA 61 FY L+ L + + G R + ++ +D ALW Sbjct: 11 PEFWFYHLERQPLQAVLPV-------LVEKTLARGWRASLRFSSAERLDAIDTALWTYRE 63 Query: 62 ESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFV-PYE 120 +SF+PH A +G PV + + ++ ++L L + F V+ + Sbjct: 64 DSFLPHGTARDGHADRQPVFLTLEEANPNN-AEVLFLLEGARESEPERFVRVIRLFDDPD 122 Query: 121 DSLKQLARERYKAYRVAGFNLN 142 D K +ARE ++ + AG ++ Sbjct: 123 DEAKAIAREEWRGAKAAGRPVS 144 >UniRef50_C8N9I8 DNA polymerase III, chi subunit n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N9I8_9GAMM Length = 152 Score = 119 bits (298), Expect = 3e-26, Method: Composition-based stats. Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 5/146 (3%) Query: 2 KNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPA 61 FY+L + + GL +L C++A + + + LI C DE A +LD ALW A Sbjct: 8 PTVRFYVLPDGS---GLENRLELACKLAEKAQQERLKTLIICADEHMAAQLDHALWHYRA 64 Query: 62 ESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATA-FTEVVDFVPYE 120 +SF+ H +G+ A V +A P +R + R D+LI+L A V + V + Sbjct: 65 DSFLTHCRSGDPLEAEAAVLLAVPPERIA-RTDVLINLSQETAPDLPRDCARVFEIVTPQ 123 Query: 121 DSLKQLARERYKAYRVAGFNLNTATW 146 + Q R RY AYR T Sbjct: 124 PDVLQSTRRRYAAYRERELEPQTHRL 149 >UniRef50_Q0EY83 DNA polymerase III subunit chi n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EY83_9PROT Length = 146 Score = 119 bits (298), Expect = 4e-26, Method: Composition-based stats. Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 11/143 (7%) Query: 3 NATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAE 62 F LL+N V+G++ + + +L+ C D A +LDE LW E Sbjct: 6 RVHFELLENPDRVEGIARLLLRRNRLTPS-------LLVLCPDPGFAAQLDERLWTIHPE 58 Query: 63 SFVPHNLAGEGPR--GGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPY- 119 SF+ H +AG P+ +A R ++ +LI+ + F +VDFV Sbjct: 59 SFLAHAVAGNDTAQNARQPILLATSIIRDNNPA-VLINGGLEVPPDISGFAHLVDFVDGW 117 Query: 120 EDSLKQLARERYKAYRVAGFNLN 142 ++ LKQ ARER++ Y G + Sbjct: 118 DEGLKQAARERFRTYSQMGLDPK 140 >UniRef50_A3JPE3 DNA polymerase III subunit chi n=1 Tax=Rhodobacterales bacterium HTCC2150 RepID=A3JPE3_9RHOB Length = 156 Score = 119 bits (298), Expect = 4e-26, Method: Composition-based stats. Identities = 30/144 (20%), Positives = 54/144 (37%), Gaps = 9/144 (6%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY L ++ L +I + +G RV++ +++ LD+ LW + Sbjct: 1 MSATYFYHLTHEPLESALP-------KIIVKARAAGWRVVVRGTSDERLDWLDKQLWTQT 53 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDIL-ISLRTSFADFATAFTEV-VDFVP 118 A+ F+PH +G PV + + + ++ I AD F + + F Sbjct: 54 ADGFLPHGRSGGKFDADQPVLLTNSSETPNDAACLIAIDRAAISADDVAKFERICLMFNG 113 Query: 119 YEDSLKQLARERYKAYRVAGFNLN 142 AR ++K GF Sbjct: 114 NNGDALDDARTQWKTLSDQGFEAQ 137 >UniRef50_C6ACN2 DNA polymerase III subunit chi n=3 Tax=Bartonella RepID=C6ACN2_BARGA Length = 148 Score = 116 bits (291), Expect = 2e-25, Method: Composition-based stats. Identities = 30/140 (21%), Positives = 49/140 (35%), Gaps = 9/140 (6%) Query: 4 ATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAES 63 FY L T D L + +V I C E+Q +D LW ES Sbjct: 3 ILFYHLTQSTLKDILPT-------LVERALARFGKVTIQCVSEEQRDSMDMHLWVYADES 55 Query: 64 FVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVP-YEDS 122 F+ H + PV + Q+ + + I + + + +V +D Sbjct: 56 FIGHGTECDQYSNFQPVFLTTGQENPNDSK-IRFLIEGAVCSNIDTYQRLVVIFDGRDDE 114 Query: 123 LKQLARERYKAYRVAGFNLN 142 L R ++K Y++ NL Sbjct: 115 QLSLVRAQWKKYKMENHNLT 134 >UniRef50_Q3A4B4 DNA polymerase III, chi subunit n=2 Tax=Desulfuromonadales RepID=Q3A4B4_PELCD Length = 138 Score = 116 bits (290), Expect = 3e-25, Method: Composition-based stats. Identities = 41/143 (28%), Positives = 61/143 (42%), Gaps = 10/143 (6%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M F + +CE+A + G+RVL+ D+ Q LD +W Sbjct: 1 MTRVEF-------VKIKRPEKAKHLCELAEHFFTQGQRVLVMVCDDNQGVTLDRFMWTWK 53 Query: 61 AESFVPHNLA-GEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVP- 118 +F+PH G PV I ++R+ + +LI + DF F V+DF Sbjct: 54 KGAFIPHVYDNGAVDCLDEPVII-EVEERNPNNAGVLIMGKPCSLDFIRQFDLVIDFAEL 112 Query: 119 YEDSLKQLARERYKAYRVAGFNL 141 YE LK AR+RY +R GF + Sbjct: 113 YEPQLKVAARKRYAHFRETGFEV 135 >UniRef50_C8WFB0 DNA polymerase III chi subunit HolC n=3 Tax=Zymomonas mobilis RepID=C8WFB0_ZYMMN Length = 148 Score = 112 bits (280), Expect = 5e-24, Method: Composition-based stats. Identities = 33/136 (24%), Positives = 54/136 (39%), Gaps = 12/136 (8%) Query: 2 KNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPA 61 FY L + + L IA + S K++L+ D++QA D+ LW Sbjct: 3 ARVDFYHLLSAKLENILP-------RIAEKTLSSDKKLLVIVPDDQQARYWDDYLWRYED 55 Query: 62 ESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFA-DFATAFTEVVDFVPYE 120 SF+PH G G PV I+ + + I+L A F V F + Sbjct: 56 TSFLPHGRVGGGDEAEHPVLISTAMEAVNQAS--YIALTDGLWRAEALNFERVFYFF--D 111 Query: 121 DSLKQLARERYKAYRV 136 + Q AR+ +++ + Sbjct: 112 EIAVQQARQAWRSLKN 127 >UniRef50_UPI0000E87DA9 DNA polymerase III chi subunit, HolC n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87DA9 Length = 139 Score = 111 bits (279), Expect = 6e-24, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 54/145 (37%), Gaps = 12/145 (8%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M N F + ++ + L+ EI A + + L +D+ L + LW Sbjct: 1 MTNIQF--------IFNVADKQGLIFEIIASSVKKNRSSLTLFDDKALMVSLSDMLWHND 52 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 SF+PH I DILI+ + + + ++ + + + Sbjct: 53 VFSFLPHQTNQSSSINK----ICLSDNGIKYMDDILINATNEKIEGFSRYLKLYELIGLD 108 Query: 121 DSLKQLARERYKAYRVAGFNLNTAT 145 + K AR+R+ Y+ G+ L+ Sbjct: 109 ELEKANARKRFTFYKDCGYKLSATD 133 >UniRef50_Q6G047 Putative uncharacterized protein n=1 Tax=Bartonella quintana RepID=Q6G047_BARQU Length = 153 Score = 111 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 52/139 (37%), Gaps = 9/139 (6%) Query: 4 ATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAES 63 FY L T D L + + RV I C ++++ +D LW E+ Sbjct: 8 IFFYHLMQSTLEDILPT-------LVERALAAFGRVTIQCVNKERRDAIDMHLWVYADEA 60 Query: 64 FVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFV-PYEDS 122 F+ H + PV + Q+ + + I + + A+ +V + D Sbjct: 61 FIGHGTECDQYPNFQPVFLTTGQENPNDSK-IRFLIEGAICSDIDAYQRLVVIFDDHSDE 119 Query: 123 LKQLARERYKAYRVAGFNL 141 L R ++K Y++ NL Sbjct: 120 QLNLVRAQWKKYKMENHNL 138 >UniRef50_A5WBH1 DNA polymerase III, chi subunit n=1 Tax=Psychrobacter sp. PRwf-1 RepID=A5WBH1_PSYWF Length = 166 Score = 111 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 19/163 (11%) Query: 3 NATFYLLDNDTTVDGLSA-----------VEQLVCEIAAERWRSGKRVLIACEDE-KQAY 50 +FY+L D +A V VC + + + L+ +D+ ++ Sbjct: 2 QISFYVLGERYLNDNAAASSTASAANAEAVLNFVCRLTQTVLQKSEHSLVIIDDQVERLK 61 Query: 51 RLDEALWARPAESFVPHN-LAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADF--- 106 +LD LW+ SFV H+ + E ++ ++++L + Sbjct: 62 QLDTQLWSFDPVSFVAHDFILEEAAVSQLSAPVSLVSTLPKGFDGVILNLAATPLPLSVE 121 Query: 107 ---ATAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNLNTATW 146 A V++ + +++ KQL R++Y+AY+ GF LN Sbjct: 122 TTAAVLPERVLEIITPDEAGKQLGRDKYRAYQQLGFELNYFPI 164 >UniRef50_D0L0I9 DNA polymerase III chi subunit HolC n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L0I9_HALNC Length = 147 Score = 110 bits (276), Expect = 1e-23, Method: Composition-based stats. Identities = 30/138 (21%), Positives = 58/138 (42%), Gaps = 7/138 (5%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M F+L+D+ T A E+ A+ ++ V + C + D+ LW Sbjct: 1 MSAVIFHLIDDPDT----EAFWFHAAELCAQAAQAEHMVYVVCANLAHVESFDDYLWGYK 56 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 ++FVPH E AP+ + ++ D +I+L + ++ + V Sbjct: 57 PDAFVPHTADPED-IAHAPIFLGVD--VAAGGFDYVINLSGKPIERVADRIQLDELVDAN 113 Query: 121 DSLKQLARERYKAYRVAG 138 + ++ AR R++ Y+ AG Sbjct: 114 PANREAARARWRDYQAAG 131 >UniRef50_Q4FVP2 DNA polymerase III, chi subunit n=2 Tax=Psychrobacter RepID=Q4FVP2_PSYA2 Length = 152 Score = 109 bits (273), Expect = 3e-23, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 61/157 (38%), Gaps = 19/157 (12%) Query: 3 NATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKR-VLIAC-EDEKQAYRLDEALWARP 60 +FY+L +C++ + +LI +D L+EALW + Sbjct: 2 KISFYVLSES----KAQDFLGFICQLTQTALNKSTQSLLILIEDDAALLSALNEALWTQE 57 Query: 61 AESFVPHNLAGEG-----PRGGAPVEIAWPQKRSSSRRDILISLRTSFADFA------TA 109 A SF+PH + + AP+ ++ ++ + ++++ + Sbjct: 58 ATSFIPHQYLLDADTDINHKTLAPILLS--SYMPANFKGMVLNTTIYPVNTFMAATNNAQ 115 Query: 110 FTEVVDFVPYEDSLKQLARERYKAYRVAGFNLNTATW 146 T V++ + + + Q R +YK+Y+ G+ L Sbjct: 116 PTRVLELIKPDATSVQEGRHKYKSYQQLGYELTHFNV 152 >UniRef50_B9KSS8 DNA polymerase III chi subunit n=39 Tax=Rhodobacterales RepID=B9KSS8_RHOSK Length = 162 Score = 108 bits (271), Expect = 4e-23, Method: Composition-based stats. Identities = 33/136 (24%), Positives = 53/136 (38%), Gaps = 8/136 (5%) Query: 4 ATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAES 63 FY L + D L + G RV++ D + LD ALW P E Sbjct: 14 VMFYHLTRSSAEDTLRL-------LLPRALGQGWRVMLRGTDRARLEALDLALWRVPEEG 66 Query: 64 FVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEV-VDFVPYEDS 122 F+PH + G PV + + ++ +L+ + A A V + F +++ Sbjct: 67 FLPHGMEGGPHDAVQPVLLGTGAIGNGAQALMLLDGAATEAAEAAPLERVWILFDGLDEA 126 Query: 123 LKQLARERYKAYRVAG 138 AR ++KA AG Sbjct: 127 ELGRARGQWKALTGAG 142 >UniRef50_B2IFT8 DNA polymerase III chi subunit HolC n=2 Tax=Beijerinckiaceae RepID=B2IFT8_BEII9 Length = 156 Score = 108 bits (271), Expect = 5e-23, Method: Composition-based stats. Identities = 25/145 (17%), Positives = 49/145 (33%), Gaps = 13/145 (8%) Query: 4 ATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAES 63 FY L L ++ + G R ++ E++ LD+ LW S Sbjct: 5 IWFYHLQRHPIERVLP-------KLLEKSLEHGWRAIVQARSEERLAVLDQWLWVYSDAS 57 Query: 64 FVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFA-----DFATAFTE-VVDFV 117 F+ H A +G PV + + R L ++ + +V F Sbjct: 58 FLAHGRACDGDAVMQPVYLTTEMDNPNGARLRLFIEGADIVSLMQDPSSSLYARMIVLFN 117 Query: 118 PYEDSLKQLARERYKAYRVAGFNLN 142 +++ +AR +++ + L Sbjct: 118 GHDEEELTIARRQWQDLKARSLPLT 142 >UniRef50_C6XKP3 DNA polymerase III chi subunit HolC n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XKP3_HIRBI Length = 169 Score = 108 bits (271), Expect = 5e-23, Method: Composition-based stats. Identities = 33/142 (23%), Positives = 60/142 (42%), Gaps = 17/142 (11%) Query: 5 TFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESF 64 FY L+ + + L + + + RVLI D + +LD LW A+SF Sbjct: 19 WFYHLERTSLEEALGP-------LLEKCLQKDWRVLI-VGDGDRLPKLDLGLWTWKADSF 70 Query: 65 VPHNLAG---EGPRGGAPVEIAWPQKRSSSRRDILISLR----TSFADFATAFTEVVDFV 117 +PH G E P+ ++ +++ DI++ L + D AT + + Sbjct: 71 LPHARLGGRDEIDPMAQPILLS-NTPEPANKADIIVLLDGKRLPNEPDDATQYIRCMVVF 129 Query: 118 PYED-SLKQLARERYKAYRVAG 138 +D + + AR ++K + AG Sbjct: 130 DGDDFNARDTARSQFKGAKDAG 151 >UniRef50_Q0BZX6 Putative DNA polymerase III chi subunit n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BZX6_HYPNA Length = 156 Score = 106 bits (265), Expect = 2e-22, Method: Composition-based stats. Identities = 32/139 (23%), Positives = 52/139 (37%), Gaps = 11/139 (7%) Query: 5 TFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESF 64 FY L SA+E+ + + G RVL ++ +LD LW SF Sbjct: 9 WFYHLSR-------SALEEAAAPLLQKCLEVGWRVLAVSPRAERLAKLDAVLWTFDDASF 61 Query: 65 VPHNLAGEG--PRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEV-VDFVPYED 121 +PH A PV ++ ++S +++ AF V F + Sbjct: 62 LPHGQADAPGLDVARQPVLLSAKLTNANSADALMLMDGVEAPVDV-AFKRCMVMFEDADT 120 Query: 122 SLKQLARERYKAYRVAGFN 140 + AR ++KA + AG Sbjct: 121 GTRNKARAQFKAAKDAGLT 139 >UniRef50_D1R4C3 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R4C3_9CHLA Length = 151 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 4/130 (3%) Query: 14 TVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEG 73 + +CE + + KR+LIA +E+ A L+ LW +P ESF+PH + Sbjct: 13 PAKNVREKLTSICETVRQHFAKQKRILIAAPNEEAARYLNALLWKQPEESFLPHIWSESQ 72 Query: 74 PRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYEDSLKQLARE-RYK 132 + + K + ++ +L++L S +F ++ D D KQ A E R+ Sbjct: 73 TEECVAITFS---KNNVNQAAVLLNLCPSVHFEWDSFEQIYDLFDETDPEKQKASESRHV 129 Query: 133 AYRVAGFNLN 142 Y G ++ Sbjct: 130 YYTEKGCQIH 139 >UniRef50_A3UJ95 DNA polymerase III subunit chi n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UJ95_9RHOB Length = 149 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 27/122 (22%), Positives = 46/122 (37%), Gaps = 8/122 (6%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY L+N + + L E+ + G R ++ ++E + LD LW Sbjct: 1 MAELWFYHLENASVDEALP-------ELLTKLMERGGRAVVCSQEETRLDHLDSHLWTFR 53 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 ESF+PH A P+ ++ + +L L + +A+ VV Sbjct: 54 EESFLPHGRADAEHVEHQPIVLSDRTDNPN-SASMLFCLDGADPGDVSAWDRVVVMFEAS 112 Query: 121 DS 122 D Sbjct: 113 DE 114 >UniRef50_Q1GS99 DNA polymerase III chi subunit, HolC n=2 Tax=Sphingomonadaceae RepID=Q1GS99_SPHAL Length = 149 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 34/138 (24%), Positives = 51/138 (36%), Gaps = 10/138 (7%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY L D L A +AA +G R+L+ Q +D ALW Sbjct: 1 MPRVDFYRLTRDPVERVLPA-------LAARVLGNGDRLLVVAAAAMQRQDIDAALWTAN 53 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFA-DFATAFTEVVDFVPY 119 SF+PH AG P+ ++ S ++L + A AF F + Sbjct: 54 PASFLPHGHAGTPDEAIEPILLSGTLDTSPPNGASRLALADGEWREDALAFDRT--FFLF 111 Query: 120 EDSLKQLARERYKAYRVA 137 ++S AR ++A Sbjct: 112 DNSRIDDARATWRALAAR 129 >UniRef50_B6BVC9 Putative uncharacterized protein n=1 Tax=beta proteobacterium KB13 RepID=B6BVC9_9PROT Length = 139 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 31/147 (21%), Positives = 64/147 (43%), Gaps = 13/147 (8%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M F + + D+ +GL+ I +R+ +R +I C++ + ++ L ++LW P Sbjct: 1 MTQIEF-IYNLDSYKEGLAL-------ILDKRY-KNQRTIIFCDNTETSHELSDSLWMNP 51 Query: 61 AESFVPHNLAGEGPRGG-APVE-IAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVP 118 F P+ + E P E + + +++I++ F + + + ++ V Sbjct: 52 --GFFPNIIWSEKLSSDVQPSENFLIGSQFNKYFDELVINVSGQECSFFSRYEKSIELVL 109 Query: 119 YEDSLKQLARERYKAYRVAGFNLNTAT 145 D+ K ARER K R G+ + Sbjct: 110 KSDNEKASARERLKKIRECGYEVKLTD 136 >UniRef50_C6XHX1 DNA polymerase III subunit chi n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XHX1_LIBAP Length = 141 Score = 102 bits (255), Expect = 3e-21, Method: Composition-based stats. Identities = 27/148 (18%), Positives = 56/148 (37%), Gaps = 13/148 (8%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M+ FY ND + L + + + GKRV + C E+ L+E LW Sbjct: 1 MRTLLFYRFKNDWEYNLLV--------LLQDEYEKGKRVSVQCGSERVRDSLNEYLWTWK 52 Query: 61 AESFVPHNL---AGEGPRGGAPVEIAWPQKRSSSRR-DILISLRTSFADFATAFTEVVDF 116 + F+PH + PV + +++ L+ + + +VV Sbjct: 53 KDGFLPHGVDVGDEGDFSSFQPVLLTISSLNANTSTIRFLVDEASMHIGDVDYYEKVVFI 112 Query: 117 VPYEDS-LKQLARERYKAYRVAGFNLNT 143 + +D + R +++ + +G+ + Sbjct: 113 INTDDQGSLEWGRAHWRSLKNSGYAPDV 140 >UniRef50_C8PWW7 DNA polymerase III, chi subunit n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PWW7_9GAMM Length = 155 Score = 101 bits (252), Expect = 8e-21, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 52/141 (36%), Gaps = 12/141 (8%) Query: 2 KNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPA 61 +FY+L VC++ + + +I + LD+ LW+ Sbjct: 4 SQISFYILSPQKKQ------LAFVCQLISTVLAKSEDSIIVVAASEILPSLDDRLWSLSD 57 Query: 62 ESFVPHNLAGE-----GPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDF 116 +F+PH + + + A V + + + ++I+L A + +++ Sbjct: 58 VAFIPHQIIQQLDDFYQQKLPASVVLTDNIELITQFDGVVINLTNEAIVDTQA-SRLLEV 116 Query: 117 VPYEDSLKQLARERYKAYRVA 137 + + R++Y+ Y+ Sbjct: 117 IDAAPEQVESGRQKYRVYQAQ 137 >UniRef50_B3CTW6 DNA polymerase III chi subunit HolC n=2 Tax=Orientia tsutsugamushi RepID=B3CTW6_ORITI Length = 169 Score = 99.5 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 20/148 (13%), Positives = 51/148 (34%), Gaps = 17/148 (11%) Query: 2 KNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPA 61 K+ FY Q +C++ + + + + +++K ++ LW+ + Sbjct: 3 KSINFY-------CTLTELFNQTLCKLLEKCYSTSLNTITLVDEKKTEEAINNTLWSFSS 55 Query: 62 ESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRR-DILISLR--------TSFADFATAFTE 112 SF+PH + + P+ I + + + +L+ L + + F Sbjct: 56 TSFIPHGCSIDPEPSSQPIYITTNYENPNQAKILVLVILSYNCCNADYDNNISYFQQFER 115 Query: 113 VVDFVPYEDSLKQLARERYKA-YRVAGF 139 ++ D+ Y + G+ Sbjct: 116 ILIIFKENDNKLIDYMNNYYHRLKQDGY 143 >UniRef50_A3VUH0 DNA polymerase III subunit chi n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VUH0_9PROT Length = 145 Score = 99.1 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 35/121 (28%), Gaps = 11/121 (9%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY + L + R ++ DE D+ALW Sbjct: 1 MTEILFYHCERARPEAVLPV-------LLERSLARDWRAVVRLPDEAAVRYWDDALWTYA 53 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISL-RTSFADFATAFTEVVDFVPY 119 +SF+PH P P+ + + R IL SL +V Sbjct: 54 DDSFLPHG--AGPPAADQPIWLTADETLP-PGRQILFSLVAEGVEKGGEGLERIVLLFDE 110 Query: 120 E 120 + Sbjct: 111 D 111 >UniRef50_Q0BNV1 DNA-directed DNA polymerase n=19 Tax=Francisella RepID=Q0BNV1_FRATO Length = 146 Score = 97.2 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 32/148 (21%), Positives = 57/148 (38%), Gaps = 11/148 (7%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M F +L L + + + K + I A +LD+ LW Sbjct: 1 MMKIEFKVLQTQDINQMLEVLITE----VVKEYALQKIIAILAP-AGIAKQLDDKLWQDG 55 Query: 61 AESFVPHNLAGEGPRGGA----PVEIAWPQKRSSSRRDILISLRT-SFADFATAFTEVVD 115 +SF+PH+ A P+ I +S D+LI++ + E+ + Sbjct: 56 QDSFIPHHCAINAREYNQYNNIPILIT-DNLFITSGYDVLINIMDVAVDPQRVKVKELKE 114 Query: 116 FVPYEDSLKQLARERYKAYRVAGFNLNT 143 FV +DS Q +R++Y Y+ + + T Sbjct: 115 FVYQQDSALQASRKKYVYYKKSNLEIIT 142 >UniRef50_A5PC15 DNA polymerase III chi subunit n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PC15_9SPHN Length = 146 Score = 97.2 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 50/136 (36%), Gaps = 12/136 (8%) Query: 3 NATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAE 62 FY L ND V ++A + ++G+R+++ DE+ + + LW + Sbjct: 2 RVDFYQLSNDPVDVT-------VAKLARKVLQAGERLVVVAADERLREHISKTLWEQGGG 54 Query: 63 SFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFA-DFATAFTEVVDFVPYED 121 SF+ + A P+ IA + R + L + A+ F + E Sbjct: 55 SFLANGPADGPHAARQPILIAETCAAPNEARMAI--LADGQWREDASGFDRTMLLFDAE- 111 Query: 122 SLKQLARERYKAYRVA 137 + AR ++ Sbjct: 112 -ATEAARGLWRELAAR 126 >UniRef50_Q2G9Y6 DNA polymerase III chi subunit, HolC n=2 Tax=Sphingomonadales RepID=Q2G9Y6_NOVAD Length = 143 Score = 96.4 bits (239), Expect = 2e-19, Method: Composition-based stats. Identities = 31/132 (23%), Positives = 53/132 (40%), Gaps = 12/132 (9%) Query: 3 NATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAE 62 FY L +D L IA +G+R+L+ +DE Q R+ EALW R E Sbjct: 2 RVDFYQLTSDPAEQVLPL-------IARNTLAAGERLLVVSDDEAQLRRVGEALWTRLPE 54 Query: 63 SFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYEDS 122 +F+ + AG P+ ++ + ++ + + +L AF V P + Sbjct: 55 TFLANGRAGTAHDERQPILLSDAPEPANGAKFM--ALADGVWRE-GAFERVFLLFP--PA 109 Query: 123 LKQLARERYKAY 134 AR ++ Sbjct: 110 RIDDARGCWRML 121 >UniRef50_A0LHL4 DNA polymerase III chi subunit n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LHL4_SYNFM Length = 152 Score = 93.3 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 32/146 (21%), Positives = 53/146 (36%), Gaps = 10/146 (6%) Query: 2 KNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPA 61 F + +L+C I + +G++V + + A +D+ LW Sbjct: 4 SRILF-------VETVAAEQRKLLCNIVEHFYEAGRKVQVVADSTLGAQHIDQMLWTFSD 56 Query: 62 ESFVPHNLAGEGPRGG-APVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 SFVPH + G PV I +R D ++ DF TAF V FV + Sbjct: 57 RSFVPHRILDPGRGTPLEPVVITVG-ERILDGFDTVVCDAECRLDFMTAFETAVHFVIRD 115 Query: 121 DSLKQ-LARERYKAYRVAGFNLNTAT 145 D ++ +R + R + Sbjct: 116 DVDRRLQSRRMWTEARDRALAVRHVP 141 >UniRef50_Q2N8X5 DNA polymerase III chi subunit n=1 Tax=Erythrobacter litoralis HTCC2594 RepID=Q2N8X5_ERYLH Length = 144 Score = 89.8 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 48/132 (36%), Gaps = 11/132 (8%) Query: 3 NATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAE 62 A F+ L D ++V IAA G+R+L+ +D+++ + +ALW E Sbjct: 2 KADFWQLSRDPAD-------KVVAMIAARVLDEGERLLVVAKDDEKRAAIAKALWEAKPE 54 Query: 63 SFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYEDS 122 F+ + A P+ + + ++ ++ F D Sbjct: 55 HFLANGEASADHAERQPILLGETCEAANGASHVIF--ADGEWRDPHGFERAFLLFS--DE 110 Query: 123 LKQLARERYKAY 134 + AR ++A Sbjct: 111 TLEAARATWRAL 122 >UniRef50_Q9ZC94 Uncharacterized protein RP872 n=16 Tax=Rickettsia RepID=Y872_RICPR Length = 165 Score = 89.1 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 48/133 (36%), Gaps = 15/133 (11%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M+ + Y N + + + + + S + +I D Q L++ LW Sbjct: 12 MQQFSIYHTSN-------ELFLKAILRLIEKCYYSNFKSVILTTDVHQQEMLNKNLWTYS 64 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRT-------SFADFATAFTEV 113 + F+PH + P+ I + ++ +L+ + ++ F + Sbjct: 65 RKQFIPHGSKFDPQPAKQPIYITDELQNPNN-ASVLVIISPTDIAKILQVKEYIKVFKRI 123 Query: 114 VDFVPYEDSLKQL 126 + ++LK+L Sbjct: 124 IIITDLLENLKEL 136 >UniRef50_A5G173 DNA polymerase III chi subunit, HolC n=13 Tax=Rhodospirillales RepID=A5G173_ACICJ Length = 155 Score = 86.8 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 27/123 (21%), Positives = 37/123 (30%), Gaps = 9/123 (7%) Query: 1 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP 60 M FY L L A+ +G R ++ D + LD ALW P Sbjct: 1 MAQLGFYHLTRTGLEAALPALLART-------LAAGARAVVRGTDPARIEALDAALWLAP 53 Query: 61 AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYE 120 ++PH A G PV + + R + L F V D Sbjct: 54 GVDWLPHGTAAMGHGPDQPVWLTTGDDVPNDARFLF--LVDGATADLARFERVFDLFDGN 111 Query: 121 DSL 123 D Sbjct: 112 DPD 114 >UniRef50_Q6MCC4 Putative uncharacterized protein n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MCC4_PARUW Length = 150 Score = 84.8 bits (209), Expect = 7e-16, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 55/142 (38%), Gaps = 9/142 (6%) Query: 2 KNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPA 61 F+ + ++ A L+C A E + KR+ I + +D LW P Sbjct: 14 SKVYFFNVKDN------QAKIHLICSKAKESFEQEKRLQILVPTIEAGQYIDSLLWRYPE 67 Query: 62 ESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYED 121 +SF+ H L + I + + + L++L + + F E+ + Sbjct: 68 DSFLTHTLTTN--LSPEWIVITTEETVNLNLAARLLNLCPHPIKYFSLFAEIYELYDESH 125 Query: 122 SLK-QLARERYKAYRVAGFNLN 142 K + ++ R+K Y+ G L+ Sbjct: 126 PQKLENSKLRFKNYQDWGLALS 147 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.311 0.163 0.530 Lambda K H 0.267 0.0499 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,095,899,392 Number of Sequences: 3077464 Number of extensions: 49865660 Number of successful extensions: 145813 Number of sequences better than 1.0e-01: 117 Number of HSP's better than 0.1 without gapping: 284 Number of HSP's successfully gapped in prelim test: 35 Number of HSP's that attempted gapping in prelim test: 145088 Number of HSP's gapped (non-prelim): 319 length of query: 147 length of database: 1,040,396,356 effective HSP length: 110 effective length of query: 37 effective length of database: 701,875,316 effective search space: 25969386692 effective search space used: 25969386692 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.0 bits) S2: 88 (38.2 bits)