Phyre 2 alignment of P77173 with c1afoB_

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Job Description | P77173
Confidence | 43.64% | Date | Thu Jan 5 12:25:58 GMT 2012
Rank | 8 | Aligned Residues | 28
% Identity | 36% | Template | c1afoB_
PDB info | PDB header:integral membrane protein | Chain: B: PDB Molecule:glycophorin a; | PDBTitle: dimeric transmembrane domain of human glycophorin a, nmr,2 20 structures
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | Q | D | L | R | L | I | L | I | I | V | G | A | . | . | . | . | I | A | I | I | A | L | L | V | H | G | F | W | T | S | R | K
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | S | E | P | E | I | T | L | I | I | F | G | V | M | A | G | V | I | G | T | I | L | L | I | S | Y | G | I | R | R | L | I | K
Template Known Secondary structure |  |  |  | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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