126 c1vmaA_ Probab=97.54   E-value=0.00074  Score=41.45  Aligned_columns=130  Identities=18%

Q ss_pred             EEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEECCEECCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             54011353335320122234578999998414433389667986615449976850484138842438688699999844
Q batch____       347 HVNFAVKRGEIFGLLGPNGAGKSTTFKMMCGLLVPTSGQALVLGMDLKESSGKARQHLGYMAQKFSLYGNLTVEQNLRFF  426 (578)
Q Consensus       347 ~is~~i~~ge~~~l~G~nG~GKsTLl~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~l~~~~tv~~~l~~~  426 (578)
                      .+.+.-.+..+++++|+||+||||.+.-|+..+.-..-++.+-..|....                              
T Consensus        84 ~~~~~~~~~~vi~~~Gp~G~GKTTt~aklA~~~~~~g~~v~li~~D~~R~------------------------------  133 (294)
T c1vmaA_          84 KLNVPPEPPFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADTFRA------------------------------  133 (294)
T ss_dssp             CCCCCSSSCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEECTTCH------------------------------
T ss_pred             CCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCH------------------------------
T ss_conf             00235789669999806887602489999999996799489997587686------------------------------


Q ss_pred             HHHCCCCHHHHHHHHHHHHHHCCCHHHCCCCHHHCCHHHHHHHHHHHHHHCCCCEEEEECC-CCCCCHHHHHHHHHHHHH
Q ss_conf             7853999689999999998754893560355031783679999999998439989999387-548898999999999999
Q batch____       427 SGVYGLRGRAQNEKISRMSEAFGLKSIASHATDELPLGFKQRLALACSLMHEPDILFLDEP-TSGVDPLTRREFWLHINS  505 (578)
Q Consensus       427 ~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGq~~rl~la~al~~~p~ililDEP-t~~LD~~~~~~i~~~l~~  505 (578)
                               ...++...+.+.+|++-.....+..++.=-++-+..|+  ..+-+++|+|-| -++-|.....++..+.+.
T Consensus       134 ---------gA~eQL~~~a~~~~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~d~IlIDTaGr~~~d~~~~~el~~~~~~  202 (294)
T c1vmaA_         134 ---------AAIEQLKIWGERVGATVISHSEGADPAAVAFDAVAHAL--ARNKDVVIIDTAGRLHTKKNLMEELRKVHRV  202 (294)
T ss_dssp             ---------HHHHHHHHHHHHHTCEEECCSTTCCHHHHHHHHHHHHH--HTTCSEEEEEECCCCSCHHHHHHHHHHHHHH
T ss_pred             ---------HHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHH--HCCCCEEEECCCCCCCCCHHHHHHHHHHHHH
T ss_conf             ---------47999999997619828974883698999999999999--7799899981888987857999999999999


Q ss_pred             HHH-----CCCEEEEEE
Q ss_conf             997-----698799992
Q batch____       506 MVE-----KGVTVMVTT  517 (578)
Q Consensus       506 l~~-----~g~tvi~vs  517 (578)
                      ...     ...++++++
T Consensus       203 ~~~~~~~~p~~~~LVl~  219 (294)
T c1vmaA_         203 VKKKIPDAPHETLLVID  219 (294)
T ss_dssp             GGGTCTTCCSEEEEEEE
T ss_pred             HHHCCCCCCCEEEEEEE
T ss_conf             63035668853999811