98 c1mkyA_ Probab=98.18   E-value=2.3e-05  Score=50.55  Aligned_columns=188  Identities=20%

Q ss_pred             EEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCHHH
Q ss_conf             89998899988899999995687587326898786166574678710358815544488987899987105754999899
Q batch____        35 VTGLVGPDGAGKTTLMRMLAGLLKPDSGSATVIGFDPIKNDGALHAVLGYMPQKFGLYEDLTVMENLNLYADLRSVTGEA  114 (578)
Q Consensus        35 ~~~ivG~nGsGKSTLL~~LaG~~~p~~G~v~v~G~~~~~~~~~~~~~ig~v~Q~~~l~~~ltv~e~l~~~~~~~~~~~~~  114 (578)
                      .++|||+.++|||||+|.|.|  ..-.+...+.|..                                            
T Consensus         2 tVaivG~pNvGKStL~N~ltr--~~~~~~~~~~g~~--------------------------------------------   35 (407)
T c1mkyA_           2 TVLIVGRPNVGKSTLFNKLVK--DPVQDTVEWYGKT--------------------------------------------   35 (407)
T ss_dssp             EEEEECCTTSSHHHHHHHHHC--CCSEEEEEETTEE--------------------------------------------
T ss_pred             EEEEECCCCCCHHHHHHHHHC--CCEEEEEEECCEE--------------------------------------------
T ss_conf             299977998888899999849--9639999759989--------------------------------------------


Q ss_pred             HHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHCCCHHH--HHHHHHHHHHHHHCCCEEE
Q ss_conf             99999999997799036245441489899999999999981997858668020799899--9999999999987593999
Q batch____       115 RKQTFARLLEFTSLGPFTGRLAGKLSGGMKQKLGLACTLVGEPKVLLLDEPGVGVDPIS--RRELWQMVHELAGEGMLIL  192 (578)
Q Consensus       115 ~~~~~~~~l~~lgl~~~~~~~~~~LSGGqk~Rv~LA~aL~~~p~iLlLDEPT~~LD~~~--~~~l~~~l~~l~~~g~tvi  192 (578)
                              +..+..+.........+.....+.+..+.   .+.+++++     -+|...  ...-..+++.++..+..++
T Consensus        36 --------~~lvDTpG~~~~~~~~~~~~~~~~~~~~i---~~aDlil~-----VvD~~~~~~~~d~~i~~~Lr~~~k~~i   99 (407)
T c1mkyA_          36 --------FKLVDTCGVFDNPQDIISQKXKEVTLNXI---READLVLF-----VVDGKRGITKEDESLADFLRKSTVDTI   99 (407)
T ss_dssp             --------EEEEECTTTTSSGGGCCCHHHHHHHHHHH---TTCSEEEE-----EEETTTCCCHHHHHHHHHHHHHTCCEE
T ss_pred             --------EEEEECCCCCCCCHHHHHHHHHHHHHHHH---HHCCEEEE-----EECCCCCCCHHHHHHHHHHHHHCCCCC
T ss_conf             --------99995567310787799899999999999---86798999-----971898789879999999986125430


Q ss_pred             EECCCHHHHHHHCHHHHHHCCEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             97776238987270655645866315898999844666899740120123454432013335777655432222100011
Q batch____       193 WSTSYLDEAEQCRDVLLMNEGELLYQGEPKALTQTMAGRSFLMTSPHEGNRKLLQRALKLPQVSDGMIQGKSVRLILKKE  272 (578)
Q Consensus       193 ~vtH~l~~~~~~d~ii~l~~G~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (578)
                      ++-...|...........+-                                             ........-......
T Consensus       100 lv~NK~D~~~~~~~~~~~ef---------------------------------------------~~lg~~~~~~ISA~~  134 (407)
T c1mkyA_         100 LVANKAENLREFEREVKPEL---------------------------------------------YSLGFGEPIPVSAEH  134 (407)
T ss_dssp             EEEESCCSHHHHHHHTHHHH---------------------------------------------GGGSSCSCEECBTTT
T ss_pred             CCCCCCCCCCHHHHHHHHHH---------------------------------------------HHCCCCCEEEEECCC
T ss_conf             01100016672246889999---------------------------------------------836998289986245


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEECC
Q ss_conf             11367887532111000122100000001110112222222223356432220122322023210347884345540113
Q batch____       273 ATPDDIRHADGMPEININETTPRFEDAFIDLLGGAGTSESPLGAILHTVEGTPGETVIEAKELTKKFGDFAATDHVNFAV  352 (578)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~is~~i  352 (578)
                      +.-.......................                                                    ..
T Consensus       135 g~g~~~l~~~i~~~~~~~~~~~~~~~----------------------------------------------------~~  162 (407)
T c1mkyA_         135 NINLDTXLETIIKKLEEKGLDLESKP----------------------------------------------------EI  162 (407)
T ss_dssp             TBSHHHHHHHHHHHHHHTTCCSSSCC----------------------------------------------------CC
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCC----------------------------------------------------CC
T ss_conf             76233210011111111111122122----------------------------------------------------34


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHCCCCC
Q ss_conf             53335320122234578999998414433
Q batch____       353 KRGEIFGLLGPNGAGKSTTFKMMCGLLVP  381 (578)
Q Consensus       353 ~~ge~~~l~G~nG~GKsTLl~~l~g~~~~  381 (578)
                      ...-.++++|..++|||||++.|+|..+.
T Consensus       163 ~~~~~iaiiG~~n~GKSSLin~l~~~~~~  191 (407)
T c1mkyA_         163 TDAIKVAIVGRPNVGKSTLFNAILNKERA  191 (407)
T ss_dssp             CSCEEEEEECSTTSSHHHHHHHHHTSTTE
T ss_pred             CCCCCCCCCCCCCCCHHHHHHHHCCCCEE
T ss_conf             43210002376666526588874088426