BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (104 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P39284 Inner membrane protein yjeO n=35 Tax=Enterobacte... 211 7e-54 UniRef50_C7BI67 Putative membrane protein n=1 Tax=Photorhabdus a... 67 2e-10 UniRef50_UPI0001A45049 hypothetical protein PcarcW_04554 n=1 Tax... 54 1e-06 UniRef50_Q8GFB3 Orf22 n=2 Tax=Photorhabdus luminescens RepID=Q8G... 53 2e-06 UniRef50_D0KG47 Putative uncharacterized protein n=2 Tax=Pectoba... 44 0.001 >UniRef50_P39284 Inner membrane protein yjeO n=35 Tax=Enterobacteriaceae RepID=YJEO_ECOLI Length = 104 Score = 211 bits (536), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 104/104 (100%), Positives = 104/104 (100%) Query: 1 MSARMFVLCCIWFIVAFLWITITSALDKEWMIDGRGINNVCDVLMYLEEDDTRDVGVIMT 60 MSARMFVLCCIWFIVAFLWITITSALDKEWMIDGRGINNVCDVLMYLEEDDTRDVGVIMT Sbjct: 1 MSARMFVLCCIWFIVAFLWITITSALDKEWMIDGRGINNVCDVLMYLEEDDTRDVGVIMT 60 Query: 61 LPLFFPFLWFALWRKKRGWFMYATALAIFGYWLWQFFLRYQFCL 104 LPLFFPFLWFALWRKKRGWFMYATALAIFGYWLWQFFLRYQFCL Sbjct: 61 LPLFFPFLWFALWRKKRGWFMYATALAIFGYWLWQFFLRYQFCL 104 >UniRef50_C7BI67 Putative membrane protein n=1 Tax=Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949 RepID=C7BI67_PHOAA Length = 104 Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 31/87 (35%), Positives = 49/87 (56%) Query: 18 LWITITSALDKEWMIDGRGINNVCDVLMYLEEDDTRDVGVIMTLPLFFPFLWFALWRKKR 77 L+I + S +KE+ IDG I N+CDV L DDTRD ++L FP + A ++ + Sbjct: 18 LFIYMMSYFEKEYYIDGIDIKNICDVYNALVVDDTRDFDAPVSLLFLFPLFYHAAKKRFK 77 Query: 78 GWFMYATALAIFGYWLWQFFLRYQFCL 104 F ++ + YW+W+FF+R C+ Sbjct: 78 SLFFNVISVVLLAYWVWRFFIRLIVCI 104 >UniRef50_UPI0001A45049 hypothetical protein PcarcW_04554 n=1 Tax=Pectobacterium carotovorum subsp. carotovorum WPP14 RepID=UPI0001A45049 Length = 111 Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 29/77 (37%), Positives = 40/77 (51%) Query: 28 KEWMIDGRGINNVCDVLMYLEEDDTRDVGVIMTLPLFFPFLWFALWRKKRGWFMYATALA 87 +EW IDG I NVCDVL + DD R+ I TL L P + + + K R + L Sbjct: 33 EEWFIDGDEIKNVCDVLRAIVVDDYRETVAIATLALITPVVIYGAFNKFRIISINIMLLV 92 Query: 88 IFGYWLWQFFLRYQFCL 104 W+W F ++Y+ CL Sbjct: 93 FLFVWIWFFIVKYRNCL 109 >UniRef50_Q8GFB3 Orf22 n=2 Tax=Photorhabdus luminescens RepID=Q8GFB3_PHOLU Length = 102 Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 1/101 (0%) Query: 3 ARMFVLCCIWFIVAFLWITITSALDKEWMIDGRGINNVCDVLMYLEEDDTRDVGVIMTLP 62 ++ VL + I L+I + S L++E I G+ I+N+C V L DD RDV L Sbjct: 2 SKSAVLNITYAIFCALFIYMMSYLEEEHYIGGQDIDNLCTVYRELV-DDNRDVFAPTCLL 60 Query: 63 LFFPFLWFALWRKKRGWFMYATALAIFGYWLWQFFLRYQFC 103 + P ++ + ++ + + A+ GYW+W+FF+R C Sbjct: 61 IMSPLIYATVKKRFKSLSLNIITFALLGYWIWRFFIRLIVC 101 >UniRef50_D0KG47 Putative uncharacterized protein n=2 Tax=Pectobacterium wasabiae WPP163 RepID=D0KG47_PECWW Length = 121 Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 9/93 (9%) Query: 11 IWFIVAFLWITITSALDKEWMIDGRGINNVCDVLMYLEEDDTRDVGVIMTLPLFFPFLWF 70 I+ + F I S + EWMIDG I ++C+V + D I+ +PL PFL Sbjct: 34 IYSALCFFLINAFSTIKYEWMIDGDSIEDLCEV----PKADADGFLSIIIVPLSIPFLLV 89 Query: 71 ALWRKKRGWFMYATALAIFGYWLWQFFLRYQFC 103 KR T LAI Y ++F+ R C Sbjct: 90 -----KRSPPRIITYLAILIYHSYRFYTRISLC 117 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P39284 Inner membrane protein yjeO n=35 Tax=Enterobacte... 113 2e-24 UniRef50_Q8GFB3 Orf22 n=2 Tax=Photorhabdus luminescens RepID=Q8G... 107 2e-22 UniRef50_C7BI67 Putative membrane protein n=1 Tax=Photorhabdus a... 94 2e-18 UniRef50_UPI0001A45049 hypothetical protein PcarcW_04554 n=1 Tax... 80 3e-14 UniRef50_D0KG47 Putative uncharacterized protein n=2 Tax=Pectoba... 77 2e-13 Sequences not found previously or not previously below threshold: UniRef50_C6DJT1 Putative uncharacterized protein n=3 Tax=Pectoba... 64 1e-09 UniRef50_Q6DA10 Putative membrane protein n=1 Tax=Pectobacterium... 49 6e-05 UniRef50_C6CP36 Putative uncharacterized protein n=2 Tax=Dickeya... 46 4e-04 UniRef50_C4UEA5 Integral membrane protein n=9 Tax=Enterobacteria... 46 4e-04 UniRef50_C6DJT0 Putative uncharacterized protein n=2 Tax=Pectoba... 42 0.008 UniRef50_UPI0001A44C23 hypothetical protein PcarcW_20488 n=1 Tax... 40 0.018 >UniRef50_P39284 Inner membrane protein yjeO n=35 Tax=Enterobacteriaceae RepID=YJEO_ECOLI Length = 104 Score = 113 bits (283), Expect = 2e-24, Method: Composition-based stats. Identities = 104/104 (100%), Positives = 104/104 (100%) Query: 1 MSARMFVLCCIWFIVAFLWITITSALDKEWMIDGRGINNVCDVLMYLEEDDTRDVGVIMT 60 MSARMFVLCCIWFIVAFLWITITSALDKEWMIDGRGINNVCDVLMYLEEDDTRDVGVIMT Sbjct: 1 MSARMFVLCCIWFIVAFLWITITSALDKEWMIDGRGINNVCDVLMYLEEDDTRDVGVIMT 60 Query: 61 LPLFFPFLWFALWRKKRGWFMYATALAIFGYWLWQFFLRYQFCL 104 LPLFFPFLWFALWRKKRGWFMYATALAIFGYWLWQFFLRYQFCL Sbjct: 61 LPLFFPFLWFALWRKKRGWFMYATALAIFGYWLWQFFLRYQFCL 104 >UniRef50_Q8GFB3 Orf22 n=2 Tax=Photorhabdus luminescens RepID=Q8GFB3_PHOLU Length = 102 Score = 107 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 1/101 (0%) Query: 3 ARMFVLCCIWFIVAFLWITITSALDKEWMIDGRGINNVCDVLMYLEEDDTRDVGVIMTLP 62 ++ VL + I L+I + S L++E I G+ I+N+C V L DD RDV L Sbjct: 2 SKSAVLNITYAIFCALFIYMMSYLEEEHYIGGQDIDNLCTVYRELV-DDNRDVFAPTCLL 60 Query: 63 LFFPFLWFALWRKKRGWFMYATALAIFGYWLWQFFLRYQFC 103 + P ++ + ++ + + A+ GYW+W+FF+R C Sbjct: 61 IMSPLIYATVKKRFKSLSLNIITFALLGYWIWRFFIRLIVC 101 >UniRef50_C7BI67 Putative membrane protein n=1 Tax=Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949 RepID=C7BI67_PHOAA Length = 104 Score = 93.5 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 34/104 (32%), Positives = 54/104 (51%) Query: 1 MSARMFVLCCIWFIVAFLWITITSALDKEWMIDGRGINNVCDVLMYLEEDDTRDVGVIMT 60 M+ VL + L+I + S +KE+ IDG I N+CDV L DDTRD ++ Sbjct: 1 MNKLSTVLIVGYVFFCVLFIYMMSYFEKEYYIDGIDIKNICDVYNALVVDDTRDFDAPVS 60 Query: 61 LPLFFPFLWFALWRKKRGWFMYATALAIFGYWLWQFFLRYQFCL 104 L FP + A ++ + F ++ + YW+W+FF+R C+ Sbjct: 61 LLFLFPLFYHAAKKRFKSLFFNVISVVLLAYWVWRFFIRLIVCI 104 >UniRef50_UPI0001A45049 hypothetical protein PcarcW_04554 n=1 Tax=Pectobacterium carotovorum subsp. carotovorum WPP14 RepID=UPI0001A45049 Length = 111 Score = 79.7 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 30/104 (28%), Positives = 49/104 (47%) Query: 1 MSARMFVLCCIWFIVAFLWITITSALDKEWMIDGRGINNVCDVLMYLEEDDTRDVGVIMT 60 + + + ++ I+ + + +EW IDG I NVCDVL + DD R+ I T Sbjct: 6 IKSTINIIMVIYSFFVIITCMMGGVFKEEWFIDGDEIKNVCDVLRAIVVDDYRETVAIAT 65 Query: 61 LPLFFPFLWFALWRKKRGWFMYATALAIFGYWLWQFFLRYQFCL 104 L L P + + + K R + L W+W F ++Y+ CL Sbjct: 66 LALITPVVIYGAFNKFRIISINIMLLVFLFVWIWFFIVKYRNCL 109 >UniRef50_D0KG47 Putative uncharacterized protein n=2 Tax=Pectobacterium wasabiae WPP163 RepID=D0KG47_PECWW Length = 121 Score = 76.6 bits (187), Expect = 2e-13, Method: Composition-based stats. Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 9/93 (9%) Query: 11 IWFIVAFLWITITSALDKEWMIDGRGINNVCDVLMYLEEDDTRDVGVIMTLPLFFPFLWF 70 I+ + F I S + EWMIDG I ++C+V + D I+ +PL PFL Sbjct: 34 IYSALCFFLINAFSTIKYEWMIDGDSIEDLCEV----PKADADGFLSIIIVPLSIPFLLV 89 Query: 71 ALWRKKRGWFMYATALAIFGYWLWQFFLRYQFC 103 KR T LAI Y ++F+ R C Sbjct: 90 -----KRSPPRIITYLAILIYHSYRFYTRISLC 117 >UniRef50_C6DJT1 Putative uncharacterized protein n=3 Tax=Pectobacterium RepID=C6DJT1_PECCP Length = 100 Score = 63.9 bits (154), Expect = 1e-09, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 9/92 (9%) Query: 12 WFIVAFLWITITSALDKEWMIDGRGINNVCDVLMYLEEDDTRDVGVIMTLPLFFPFLWFA 71 + + I S ++ EWM+D +++ C+V D + + +PL PFL Sbjct: 15 YSALCLFLINAFSTIEYEWMLDDGSLDSFCEV----PRADADGFLIFIIVPLSIPFLLV- 69 Query: 72 LWRKKRGWFMYATALAIFGYWLWQFFLRYQFC 103 KR T LAI Y ++F+ R C Sbjct: 70 ----KRTPPRIVTYLAILIYHSYRFYTRVSLC 97 >UniRef50_Q6DA10 Putative membrane protein n=1 Tax=Pectobacterium atrosepticum RepID=Q6DA10_ERWCT Length = 76 Score = 48.8 bits (115), Expect = 6e-05, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 4/59 (6%) Query: 11 IWFIVAFLWITITSALDKEWMIDGRGINNVCDVLMYLEEDDTRDVGVIMTLPLFFPFLW 69 + + F I S ++ EWMIDG + + C+V D + +PL P Sbjct: 15 TYAALCFFLINAFSTIEYEWMIDGDSVADFCEV----PRADADAFLNFIIIPLSIPSFL 69 >UniRef50_C6CP36 Putative uncharacterized protein n=2 Tax=Dickeya RepID=C6CP36_DICZE Length = 101 Score = 46.1 bits (108), Expect = 4e-04, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 1/79 (1%) Query: 26 LDKEWMIDGRGINNVCDVLMYLEEDDTRDVGVIMTLPLFFPFLWFA-LWRKKRGWFMYAT 84 +E IDG+ I N C DD RDV ++ F + + + Sbjct: 23 FKEESYIDGKEIINACMAFKTFLVDDIRDVTAPISFIFFILPFFIIISKERFKKISTIIF 82 Query: 85 ALAIFGYWLWQFFLRYQFC 103 +F YWLW+FF+R C Sbjct: 83 ISLLFLYWLWRFFIRLNIC 101 >UniRef50_C4UEA5 Integral membrane protein n=9 Tax=Enterobacteriaceae RepID=C4UEA5_YERAL Length = 69 Score = 45.8 bits (107), Expect = 4e-04, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 28/68 (41%) Query: 36 GINNVCDVLMYLEEDDTRDVGVIMTLPLFFPFLWFALWRKKRGWFMYATALAIFGYWLWQ 95 I N C L DD RD V + + P + K + + ++ + Y LW+ Sbjct: 2 EIKNACIAHRALVVDDIRDFTVTLAILALIPCFIYLKSFKFKNKPLNILSVLLAFYLLWR 61 Query: 96 FFLRYQFC 103 FF+R C Sbjct: 62 FFIRLNIC 69 >UniRef50_C6DJT0 Putative uncharacterized protein n=2 Tax=Pectobacterium RepID=C6DJT0_PECCP Length = 65 Score = 41.5 bits (96), Expect = 0.008, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 9/73 (12%) Query: 31 MIDGRGINNVCDVLMYLEEDDTRDVGVIMTLPLFFPFLWFALWRKKRGWFMYATALAIFG 90 M+DG I N C++ E D+ + +PL PF + K+ T + + Sbjct: 1 MVDGVEIRNRCEI----PEGDSDGFFAFIIIPLSIPFFFV-----KKSMDRIITYIIMLF 51 Query: 91 YWLWQFFLRYQFC 103 Y+LW F++R+ FC Sbjct: 52 YYLWSFYIRFNFC 64 >UniRef50_UPI0001A44C23 hypothetical protein PcarcW_20488 n=1 Tax=Pectobacterium carotovorum subsp. carotovorum WPP14 RepID=UPI0001A44C23 Length = 93 Score = 40.4 bits (93), Expect = 0.018, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 38/93 (40%) Query: 8 LCCIWFIVAFLWITITSALDKEWMIDGRGINNVCDVLMYLEEDDTRDVGVIMTLPLFFPF 67 + + + I S+L +E+ IDG I N+CDV+ DD R + L P Sbjct: 1 MVITYTWLLIFLSLIFSSLKEEFFIDGDEIKNICDVVRVFVVDDHRGPMALSILVASIPA 60 Query: 68 LWFALWRKKRGWFMYATALAIFGYWLWQFFLRY 100 + + + K + + + L F +L+ Sbjct: 61 IAYGIKTKFKSSALIGSLLFFFLNLGLGIYLQI 93 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P39284 Inner membrane protein yjeO n=35 Tax=Enterobacte... 95 6e-19 UniRef50_Q8GFB3 Orf22 n=2 Tax=Photorhabdus luminescens RepID=Q8G... 92 6e-18 UniRef50_C7BI67 Putative membrane protein n=1 Tax=Photorhabdus a... 87 1e-16 UniRef50_UPI0001A45049 hypothetical protein PcarcW_04554 n=1 Tax... 80 3e-14 UniRef50_D0KG47 Putative uncharacterized protein n=2 Tax=Pectoba... 72 6e-12 UniRef50_C6DJT1 Putative uncharacterized protein n=3 Tax=Pectoba... 70 3e-11 UniRef50_C6CP36 Putative uncharacterized protein n=2 Tax=Dickeya... 60 3e-08 UniRef50_C4UEA5 Integral membrane protein n=9 Tax=Enterobacteria... 58 1e-07 UniRef50_Q6DA10 Putative membrane protein n=1 Tax=Pectobacterium... 54 1e-06 Sequences not found previously or not previously below threshold: UniRef50_C6DJT0 Putative uncharacterized protein n=2 Tax=Pectoba... 40 0.019 UniRef50_UPI0001A44C23 hypothetical protein PcarcW_20488 n=1 Tax... 39 0.039 CONVERGED! >UniRef50_P39284 Inner membrane protein yjeO n=35 Tax=Enterobacteriaceae RepID=YJEO_ECOLI Length = 104 Score = 95.1 bits (235), Expect = 6e-19, Method: Composition-based stats. Identities = 104/104 (100%), Positives = 104/104 (100%) Query: 1 MSARMFVLCCIWFIVAFLWITITSALDKEWMIDGRGINNVCDVLMYLEEDDTRDVGVIMT 60 MSARMFVLCCIWFIVAFLWITITSALDKEWMIDGRGINNVCDVLMYLEEDDTRDVGVIMT Sbjct: 1 MSARMFVLCCIWFIVAFLWITITSALDKEWMIDGRGINNVCDVLMYLEEDDTRDVGVIMT 60 Query: 61 LPLFFPFLWFALWRKKRGWFMYATALAIFGYWLWQFFLRYQFCL 104 LPLFFPFLWFALWRKKRGWFMYATALAIFGYWLWQFFLRYQFCL Sbjct: 61 LPLFFPFLWFALWRKKRGWFMYATALAIFGYWLWQFFLRYQFCL 104 >UniRef50_Q8GFB3 Orf22 n=2 Tax=Photorhabdus luminescens RepID=Q8GFB3_PHOLU Length = 102 Score = 92.0 bits (227), Expect = 6e-18, Method: Composition-based stats. Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 1/101 (0%) Query: 3 ARMFVLCCIWFIVAFLWITITSALDKEWMIDGRGINNVCDVLMYLEEDDTRDVGVIMTLP 62 ++ VL + I L+I + S L++E I G+ I+N+C V L DD RDV L Sbjct: 2 SKSAVLNITYAIFCALFIYMMSYLEEEHYIGGQDIDNLCTVYRELV-DDNRDVFAPTCLL 60 Query: 63 LFFPFLWFALWRKKRGWFMYATALAIFGYWLWQFFLRYQFC 103 + P ++ + ++ + + A+ GYW+W+FF+R C Sbjct: 61 IMSPLIYATVKKRFKSLSLNIITFALLGYWIWRFFIRLIVC 101 >UniRef50_C7BI67 Putative membrane protein n=1 Tax=Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949 RepID=C7BI67_PHOAA Length = 104 Score = 87.4 bits (215), Expect = 1e-16, Method: Composition-based stats. Identities = 34/104 (32%), Positives = 54/104 (51%) Query: 1 MSARMFVLCCIWFIVAFLWITITSALDKEWMIDGRGINNVCDVLMYLEEDDTRDVGVIMT 60 M+ VL + L+I + S +KE+ IDG I N+CDV L DDTRD ++ Sbjct: 1 MNKLSTVLIVGYVFFCVLFIYMMSYFEKEYYIDGIDIKNICDVYNALVVDDTRDFDAPVS 60 Query: 61 LPLFFPFLWFALWRKKRGWFMYATALAIFGYWLWQFFLRYQFCL 104 L FP + A ++ + F ++ + YW+W+FF+R C+ Sbjct: 61 LLFLFPLFYHAAKKRFKSLFFNVISVVLLAYWVWRFFIRLIVCI 104 >UniRef50_UPI0001A45049 hypothetical protein PcarcW_04554 n=1 Tax=Pectobacterium carotovorum subsp. carotovorum WPP14 RepID=UPI0001A45049 Length = 111 Score = 79.7 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 30/104 (28%), Positives = 49/104 (47%) Query: 1 MSARMFVLCCIWFIVAFLWITITSALDKEWMIDGRGINNVCDVLMYLEEDDTRDVGVIMT 60 + + + ++ I+ + + +EW IDG I NVCDVL + DD R+ I T Sbjct: 6 IKSTINIIMVIYSFFVIITCMMGGVFKEEWFIDGDEIKNVCDVLRAIVVDDYRETVAIAT 65 Query: 61 LPLFFPFLWFALWRKKRGWFMYATALAIFGYWLWQFFLRYQFCL 104 L L P + + + K R + L W+W F ++Y+ CL Sbjct: 66 LALITPVVIYGAFNKFRIISINIMLLVFLFVWIWFFIVKYRNCL 109 >UniRef50_D0KG47 Putative uncharacterized protein n=2 Tax=Pectobacterium wasabiae WPP163 RepID=D0KG47_PECWW Length = 121 Score = 72.0 bits (175), Expect = 6e-12, Method: Composition-based stats. Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 9/98 (9%) Query: 6 FVLCCIWFIVAFLWITITSALDKEWMIDGRGINNVCDVLMYLEEDDTRDVGVIMTLPLFF 65 + I+ + F I S + EWMIDG I ++C+V + D I+ +PL Sbjct: 29 NIYFYIYSALCFFLINAFSTIKYEWMIDGDSIEDLCEV----PKADADGFLSIIIVPLSI 84 Query: 66 PFLWFALWRKKRGWFMYATALAIFGYWLWQFFLRYQFC 103 PFL KR T LAI Y ++F+ R C Sbjct: 85 PFLLV-----KRSPPRIITYLAILIYHSYRFYTRISLC 117 >UniRef50_C6DJT1 Putative uncharacterized protein n=3 Tax=Pectobacterium RepID=C6DJT1_PECCP Length = 100 Score = 69.6 bits (169), Expect = 3e-11, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 40/98 (40%), Gaps = 9/98 (9%) Query: 6 FVLCCIWFIVAFLWITITSALDKEWMIDGRGINNVCDVLMYLEEDDTRDVGVIMTLPLFF 65 V + + I S ++ EWM+D +++ C+V D + + +PL Sbjct: 9 NVYFYAYSALCLFLINAFSTIEYEWMLDDGSLDSFCEV----PRADADGFLIFIIVPLSI 64 Query: 66 PFLWFALWRKKRGWFMYATALAIFGYWLWQFFLRYQFC 103 PFL KR T LAI Y ++F+ R C Sbjct: 65 PFLLV-----KRTPPRIVTYLAILIYHSYRFYTRVSLC 97 >UniRef50_C6CP36 Putative uncharacterized protein n=2 Tax=Dickeya RepID=C6CP36_DICZE Length = 101 Score = 59.6 bits (143), Expect = 3e-08, Method: Composition-based stats. Identities = 23/80 (28%), Positives = 31/80 (38%), Gaps = 1/80 (1%) Query: 25 ALDKEWMIDGRGINNVCDVLMYLEEDDTRDVGVI-MTLPLFFPFLWFALWRKKRGWFMYA 83 +E IDG+ I N C DD RDV + PF + + Sbjct: 22 VFKEESYIDGKEIINACMAFKTFLVDDIRDVTAPISFIFFILPFFIIISKERFKKISTII 81 Query: 84 TALAIFGYWLWQFFLRYQFC 103 +F YWLW+FF+R C Sbjct: 82 FISLLFLYWLWRFFIRLNIC 101 >UniRef50_C4UEA5 Integral membrane protein n=9 Tax=Enterobacteriaceae RepID=C4UEA5_YERAL Length = 69 Score = 57.7 bits (138), Expect = 1e-07, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 28/68 (41%) Query: 36 GINNVCDVLMYLEEDDTRDVGVIMTLPLFFPFLWFALWRKKRGWFMYATALAIFGYWLWQ 95 I N C L DD RD V + + P + K + + ++ + Y LW+ Sbjct: 2 EIKNACIAHRALVVDDIRDFTVTLAILALIPCFIYLKSFKFKNKPLNILSVLLAFYLLWR 61 Query: 96 FFLRYQFC 103 FF+R C Sbjct: 62 FFIRLNIC 69 >UniRef50_Q6DA10 Putative membrane protein n=1 Tax=Pectobacterium atrosepticum RepID=Q6DA10_ERWCT Length = 76 Score = 54.2 bits (129), Expect = 1e-06, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 4/64 (6%) Query: 6 FVLCCIWFIVAFLWITITSALDKEWMIDGRGINNVCDVLMYLEEDDTRDVGVIMTLPLFF 65 V + + F I S ++ EWMIDG + + C+V D + +PL Sbjct: 10 NVYFYTYAALCFFLINAFSTIEYEWMIDGDSVADFCEV----PRADADAFLNFIIIPLSI 65 Query: 66 PFLW 69 P Sbjct: 66 PSFL 69 >UniRef50_C6DJT0 Putative uncharacterized protein n=2 Tax=Pectobacterium RepID=C6DJT0_PECCP Length = 65 Score = 40.4 bits (93), Expect = 0.019, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 9/73 (12%) Query: 31 MIDGRGINNVCDVLMYLEEDDTRDVGVIMTLPLFFPFLWFALWRKKRGWFMYATALAIFG 90 M+DG I N C++ E D+ + +PL PF + K+ T + + Sbjct: 1 MVDGVEIRNRCEI----PEGDSDGFFAFIIIPLSIPFFFV-----KKSMDRIITYIIMLF 51 Query: 91 YWLWQFFLRYQFC 103 Y+LW F++R+ FC Sbjct: 52 YYLWSFYIRFNFC 64 >UniRef50_UPI0001A44C23 hypothetical protein PcarcW_20488 n=1 Tax=Pectobacterium carotovorum subsp. carotovorum WPP14 RepID=UPI0001A44C23 Length = 93 Score = 39.2 bits (90), Expect = 0.039, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 38/93 (40%) Query: 8 LCCIWFIVAFLWITITSALDKEWMIDGRGINNVCDVLMYLEEDDTRDVGVIMTLPLFFPF 67 + + + I S+L +E+ IDG I N+CDV+ DD R + L P Sbjct: 1 MVITYTWLLIFLSLIFSSLKEEFFIDGDEIKNICDVVRVFVVDDHRGPMALSILVASIPA 60 Query: 68 LWFALWRKKRGWFMYATALAIFGYWLWQFFLRY 100 + + + K + + + L F +L+ Sbjct: 61 IAYGIKTKFKSSALIGSLLFFFLNLGLGIYLQI 93 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.333 0.140 0.401 Lambda K H 0.267 0.0421 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 636,753,515 Number of Sequences: 3077464 Number of extensions: 21483344 Number of successful extensions: 156308 Number of sequences better than 1.0e-01: 16 Number of HSP's better than 0.1 without gapping: 28 Number of HSP's successfully gapped in prelim test: 13 Number of HSP's that attempted gapping in prelim test: 156246 Number of HSP's gapped (non-prelim): 42 length of query: 104 length of database: 1,040,396,356 effective HSP length: 72 effective length of query: 32 effective length of database: 818,818,948 effective search space: 26202206336 effective search space used: 26202206336 T: 11 A: 40 X1: 16 ( 7.7 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 39 (21.6 bits) S2: 87 (38.1 bits)