96 c3ncoA_ Probab=87.28   E-value=2  Score=21.59  Aligned_columns=240  Identities=18%

Q ss_pred             CCCCCEEEEE---EHHHCCCC-----CHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Q ss_conf             7774103466---13328887-----989999999981999899863564323343589989999999999970992789
Q batch____         2 LSKQIPLGIY---EKALPAGE-----CWLERLQLAKTLGFDFVEMSVDETDDRLSRLNWSREQRLALVNAIVETGVRVPS   73 (284)
Q Consensus         2 ~~~~~~igi~---~~~~~~~~-----s~~e~i~~a~~~G~~~IEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~i~~   73 (284)
                      +.+.|-.|++   ...-+.+-     ..++-++.++++||..|-+.+.                                
T Consensus         9 ~~~~~~~G~n~~~~~~~~~~~~w~~~~te~d~~~ia~~G~N~vRipi~--------------------------------   56 (313)
T c3ncoA_           9 YNKXIGHGINXGNALEAPVEGSWGVYIEDEYFKIIKERGFDSVRIPIR--------------------------------   56 (313)
T ss_dssp             HHHHHCEEEECCSSTTSSSTTTTSCCCCHHHHHHHHHHTCCEEEECCC--------------------------------
T ss_pred             HHHHHCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECC--------------------------------
T ss_conf             997616971153311267888878838899999999859988998276--------------------------------


Q ss_pred             EECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEE
Q ss_conf             75576777987789989999999999999999987199999907577887899789999999999999999987188384
Q batch____        74 MCLSAHRRFPLGSEDDAVRAQGLEIMRKAIQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLA  153 (284)
Q Consensus        74 ~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lg~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~  153 (284)
                           ...+..........+..++.++++++.|++.|.++|.-........................++...+.+...+.
T Consensus        57 -----w~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~viidlH~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~  131 (313)
T c3ncoA_          57 -----WSAHISEKYPYEIDKFFLDRVKHVVDVALKNDLVVIINCHHFEELYQAPDKYGPVLVEIWKQVAQAFKDYPDKLF  131 (313)
T ss_dssp             -----GGGSBCSSTTCCBCHHHHHHHHHHHHHHHHTTCEEEEECCCCHHHHHCHHHHHHHHHHHHHHHHHHHTTSCTTEE
T ss_pred             -----HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEE
T ss_conf             -----888157888876089999999999999998898899980168643566213579998667999999627993899


Q ss_pred             ECC-CCCCCCCCHHHHHHHHHHH------CCCCCCEEECHHHHHHCCCCHHHHHHHCCHHEEEEEEECCCCCCCCEEECC
Q ss_conf             035-6787467989999998641------124453115468886204785899971100216887513889988611067
Q batch____       154 MEI-MDYPLMSSISKALGYAHYL------NNPWFQLYPDIGNLSAWDNDVQMELQAGIGHIVAVHVKDTKPGVFKNVPFG  226 (284)
Q Consensus       154 ~e~-~~~~~~~~~~~~~~l~~~~------~~~~~~l~~d~~h~~~~~~~~~~~~~~~~~~i~~vHi~D~~~~~~~~~~~G  226 (284)
                      ++. .......+......+.+.+      ..++..+.......................-+..+|.-+...-.++....+
T Consensus       132 ~~l~NEp~~~~~~~~~~~~~~~~~~~ir~~~p~~~iiv~g~~~~~~~~~~~~~~~~~~~v~~~~H~Y~~~~~~~~~~~~~  211 (313)
T c3ncoA_         132 FEIFNEPAQNLTPTKWNELYPKVLGEIRKTNPSRIVIIDVPNWSNYSYVRELKLVDDKNIIVSFHYYEPFNFTHQGAEWV  211 (313)
T ss_dssp             EECCSCCCTTSCHHHHHHHHHHHHHHHHHHCSSCCEEEECSGGGBGGGGGGCCCCSCTTEEEEEEECCSHHHHTTTCTTS
T ss_pred             EECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC
T ss_conf             74344557788988999999999986412478827997278777622001234678971899960476542236666667


Q ss_pred             CCCCC------------------HHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             87369------------------9999999997299821999840888249799999999999999884498
Q batch____       227 EGVVD------------------FERCFETLKQSGYCGPYLIEMWSETAEDPAAEVAKARDWVKARMAKAGM  280 (284)
Q Consensus       227 ~G~id------------------~~~~l~~L~~~gy~G~i~~E~~~~~~~d~~~~i~~~~~~l~~~l~~~g~  280 (284)
                      .-...                  +..+.....+.|  .|+.+.=|.-...++...-.+..+.+.+.+.+.|+
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~Pv~igEfG~~~~~~~~~~~~~~~~~~~~~~~~gi  281 (313)
T c3ncoA_         212 SPTLPIGVKWEGKDWEVEQIRNHFKYVSEWAKKNN--VPIFLGEFGAYSKADXESRVKWTKTVRRIAEEFGF  281 (313)
T ss_dssp             SSCCCSCCCCCCCHHHHHHHHHHHHHHHHHHHHHT--CCEEEEEECCCTTSCHHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCC
T ss_conf             76555555446855569999999999999887449--96999124688689989999999999999997699