BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (252 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P16433 Formate hydrogenlyase subunit 7 n=169 Tax=Bacter... 309 7e-83 UniRef50_C6ANV6 Hydrogenase-4 component I n=6 Tax=Gammaproteobac... 301 1e-80 UniRef50_C7MLM8 Ni,Fe-hydrogenase III small subunit n=20 Tax=Bac... 283 5e-75 UniRef50_B2N3C8 Hydrogenase-4 component I n=2 Tax=Enterobacteria... 247 3e-64 UniRef50_UPI0001B52F0A hydrogenase 4, Fe-S subunit n=1 Tax=Shige... 238 1e-61 UniRef50_A7GWN3 HsdS n=9 Tax=Proteobacteria RepID=A7GWN3_CAMC5 222 1e-56 UniRef50_B1ZSE5 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 150 6e-35 UniRef50_A1RWL1 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 148 2e-34 UniRef50_Q0W2C0 Hydrogenase, small subunit-like protein (HycG-li... 144 2e-33 UniRef50_A1ASR2 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 144 3e-33 UniRef50_A3DKH2 NADH-quinone oxidoreductase, B subunit n=5 Tax=c... 143 7e-33 UniRef50_B8J1E3 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 139 8e-32 UniRef50_C8W241 Hydrogenase, small subunit-like protein n=1 Tax=... 138 2e-31 UniRef50_B6YU96 Membrane bound hydrogenase, NiFe-hydrogenase sma... 136 6e-31 UniRef50_C7IG01 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 135 2e-30 UniRef50_B6IT61 Hydrogenase-4 component I n=4 Tax=Bacteria RepID... 134 3e-30 UniRef50_A6UVJ5 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 131 2e-29 UniRef50_B9L8U0 Hydrogenase-4 component I n=2 Tax=Epsilonproteob... 130 4e-29 UniRef50_B6YWP9 NADH dehydrogenase (Ubiquinone), 20 kDa subunit ... 130 5e-29 UniRef50_B2V8R1 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 129 1e-28 UniRef50_B2A054 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 127 3e-28 UniRef50_B6YT72 Hydrogenase 4, component I or formate hydrogen l... 126 8e-28 UniRef50_C7NUN9 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 124 3e-27 UniRef50_A9KS72 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 123 7e-27 UniRef50_B2IID4 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 121 2e-26 UniRef50_Q12F15 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 120 3e-26 UniRef50_C5A2Q7 Formate hydrogenlyase II subunit H (Mhy2H) n=3 T... 119 7e-26 UniRef50_Q24ST9 Formate hydrogenlyase subunit 7 n=2 Tax=Desulfit... 118 2e-25 UniRef50_A7I7C9 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 117 3e-25 UniRef50_D0L1N9 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 116 7e-25 UniRef50_A4EBM2 Putative uncharacterized protein n=1 Tax=Collins... 115 1e-24 UniRef50_Q2T5T7 Formate hydrogenlyase subunit 7 n=21 Tax=Bacteri... 115 2e-24 UniRef50_C6PUG1 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 115 2e-24 UniRef50_Q57936 Uncharacterized protein MJ0516 n=21 Tax=Euryarch... 114 3e-24 UniRef50_Q0W6T1 [NiFe]-hydrogenase, small subunit (EchC-like) n=... 113 5e-24 UniRef50_Q39SF9 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 113 6e-24 UniRef50_C5CEV5 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 113 7e-24 UniRef50_B6YTX0 Hydrogenase 4, component I or formate hydrogen l... 112 9e-24 UniRef50_B5E8B5 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 112 1e-23 UniRef50_B8IYV4 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 111 2e-23 UniRef50_A1SQ82 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 109 7e-23 UniRef50_A3PKI1 NADH-quinone oxidoreductase subunit B 2 n=6 Tax=... 107 5e-22 UniRef50_A5FW47 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 105 1e-21 UniRef50_A6Q6W5 Ni-Fe hydrogenase, small subunit HycG n=3 Tax=Ep... 105 2e-21 UniRef50_D1B297 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 103 4e-21 UniRef50_C1XWY8 Ni,Fe-hydrogenase III small subunit n=1 Tax=Meio... 103 5e-21 UniRef50_B6GAA3 Putative uncharacterized protein n=1 Tax=Collins... 102 8e-21 UniRef50_Q9DC70 NADH dehydrogenase [ubiquinone] iron-sulfur prot... 102 1e-20 UniRef50_C7JEU9 NADH-ubiquinone oxidoreductase 20 kDa subunit n=... 101 2e-20 UniRef50_A5UXK1 NADH-quinone oxidoreductase subunit B 1 n=13 Tax... 101 2e-20 UniRef50_O75251 NADH dehydrogenase [ubiquinone] iron-sulfur prot... 100 4e-20 UniRef50_Q58758 Uncharacterized protein MJ1363 n=17 Tax=Euryarch... 100 5e-20 UniRef50_Q0BSK3 NADH-quinone oxidoreductase subunit B n=31 Tax=c... 100 8e-20 UniRef50_A6LXQ4 NADH-quinone oxidoreductase subunit B n=4 Tax=Ba... 99 1e-19 UniRef50_C5GDP9 NADH-ubiquinone oxidoreductase 20 kDa subunit n=... 99 1e-19 UniRef50_B8HLE8 NAD(P)H-quinone oxidoreductase subunit K 2 n=94 ... 99 2e-19 UniRef50_B9L626 NADH-ubiquinone oxidoreductase 20 kDa subunit n=... 98 2e-19 UniRef50_Q1AVI4 NADH-quinone oxidoreductase subunit B n=15 Tax=B... 98 2e-19 UniRef50_A4J659 NADH-quinone oxidoreductase subunit B n=34 Tax=F... 97 4e-19 UniRef50_Q3A825 NADH-quinone oxidoreductase subunit B/C/D n=103 ... 96 9e-19 UniRef50_A9A345 NADH-quinone oxidoreductase, B subunit n=1 Tax=N... 96 1e-18 UniRef50_B3QY47 NADH-quinone oxidoreductase subunit B 2 n=8 Tax=... 96 1e-18 UniRef50_C5U7Y6 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 96 1e-18 UniRef50_C1A8Z3 NADH-quinone oxidoreductase chain B n=1 Tax=Gemm... 96 1e-18 UniRef50_O21272 NADH-ubiquinone oxidoreductase 20 kDa subunit n=... 96 1e-18 UniRef50_B5YKI3 NADH-quinone oxidoreductase subunit B 1 n=1 Tax=... 96 1e-18 UniRef50_D2EGC1 NADH-quinone oxidoreductase, B subunit n=1 Tax=C... 96 2e-18 UniRef50_C9RKY2 NADH-quinone oxidoreductase, B subunit n=2 Tax=c... 95 2e-18 UniRef50_A6DAC3 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 95 2e-18 UniRef50_A5TDF9 NADH-quinone oxidoreductase, B subunit n=2 Tax=p... 95 2e-18 UniRef50_A0RY66 NADH-ubiquinone oxidoreductase, subunit B n=3 Ta... 94 3e-18 UniRef50_A3ETD3 Putative hydrogenase-3 (HycG) n=3 Tax=Leptospiri... 94 5e-18 UniRef50_B0TH78 NADH-quinone oxidoreductase subunit B n=5 Tax=Ba... 94 5e-18 UniRef50_Q8DKZ4 NAD(P)H-quinone oxidoreductase subunit K n=21 Ta... 94 5e-18 UniRef50_C7IWD0 Os01g0791600 protein n=3 Tax=Oryza sativa Japoni... 94 5e-18 UniRef50_Q978D5 Formate hydrogenlyase subunit 2 n=2 Tax=Thermopl... 94 5e-18 UniRef50_B1W4V9 NADH-quinone oxidoreductase subunit B 2 n=27 Tax... 94 5e-18 UniRef50_B5ZJ00 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 94 6e-18 UniRef50_A0B811 F420H2 dehydrogenase subunit B n=6 Tax=Archaea R... 93 1e-17 UniRef50_B1ZSE7 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 92 1e-17 UniRef50_D2R6Y4 NADH-quinone oxidoreductase, B subunit n=1 Tax=P... 92 1e-17 UniRef50_A6L170 NADH-quinone oxidoreductase subunit B n=35 Tax=B... 91 3e-17 UniRef50_Q21TB3 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 91 3e-17 UniRef50_C6X0Z2 NADH-ubiquinone oxidoreductase chain B n=2 Tax=F... 91 4e-17 UniRef50_A8M069 NADH-quinone oxidoreductase subunit B 1 n=6 Tax=... 90 7e-17 UniRef50_Q3ZXS0 NADH-quinone oxidoreductase subunit B n=5 Tax=De... 90 7e-17 UniRef50_Q1IZX2 NADH-quinone oxidoreductase subunit B n=16 Tax=c... 90 9e-17 UniRef50_A8MBS9 NADH-quinone oxidoreductase, B subunit n=5 Tax=T... 90 9e-17 UniRef50_A0LSU0 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 89 1e-16 UniRef50_A9G9S9 NADH-quinone oxidoreductase subunit B 2 n=2 Tax=... 89 1e-16 UniRef50_A1RZ48 NADH-quinone oxidoreductase, B subunit n=3 Tax=T... 89 1e-16 UniRef50_A2BJ94 NAD(P)H-quinone oxidoreductase chain K n=10 Tax=... 89 1e-16 UniRef50_A4YGN5 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 89 2e-16 UniRef50_Q1IPE7 NADH-quinone oxidoreductase subunit B 1 n=10 Tax... 88 2e-16 UniRef50_B4U8H3 NADH-quinone oxidoreductase subunit B n=4 Tax=Ba... 88 2e-16 UniRef50_Q492H7 NADH-quinone oxidoreductase subunit B n=225 Tax=... 88 2e-16 UniRef50_A9GUX6 NADH-quinone oxidoreductase subunit B 1 n=10 Tax... 88 3e-16 UniRef50_C7PSH0 NADH-quinone oxidoreductase, B subunit n=4 Tax=S... 87 4e-16 UniRef50_C1ZCK3 NADH dehydrogenase subunit B n=1 Tax=Planctomyce... 87 4e-16 UniRef50_D2PJN5 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 86 9e-16 UniRef50_C1VB41 NADH dehydrogenase subunit B n=1 Tax=Halogeometr... 86 1e-15 UniRef50_A9BJL8 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 86 1e-15 UniRef50_B3TC56 Putative NADH ubiquinone oxidoreductase, 20 Kd s... 86 1e-15 UniRef50_A3THJ2 NADH dehydrogenase beta subunit n=2 Tax=Bacteria... 86 1e-15 UniRef50_Q26783 NADH dehydrogenase [ubiquinone] iron-sulfur prot... 85 2e-15 UniRef50_Q1IL91 NADH-quinone oxidoreductase subunit B 2 n=4 Tax=... 85 2e-15 UniRef50_B0SFT5 NADH-quinone oxidoreductase subunit B n=13 Tax=c... 84 4e-15 UniRef50_B1KJU9 NADH-quinone oxidoreductase subunit B n=8 Tax=Pr... 83 7e-15 UniRef50_C5A4Q2 Membrane bound oxidoreductase, MbxJ subunit (Mbx... 83 8e-15 UniRef50_UPI00016C3AA7 NADH-quinone oxidoreductase, B subunit n=... 83 8e-15 UniRef50_B1L7S0 F420H2 dehydrogenase subunit n=3 Tax=Archaea Rep... 83 9e-15 UniRef50_B0R3U2 NADH dehydrogenase-like complex subunit B n=11 T... 83 9e-15 UniRef50_Q2S5J2 NADH-quinone oxidoreductase subunit B n=4 Tax=Ba... 82 1e-14 UniRef50_A5FW77 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 82 2e-14 UniRef50_Q1D8S3 NADH-quinone oxidoreductase subunit B n=2 Tax=Cy... 81 3e-14 UniRef50_B1ZUJ0 NADH-quinone oxidoreductase subunit B 2 n=13 Tax... 81 4e-14 UniRef50_C0QR84 NADH-quinone oxidoreductase chain b (Nadh dehydr... 80 4e-14 UniRef50_B6YR59 NADH-quinone oxidoreductase subunit B n=5 Tax=Ba... 80 5e-14 UniRef50_Q0RRW7 NADH-quinone oxidoreductase subunit B n=5 Tax=Ba... 80 8e-14 UniRef50_A3DM92 NADH-quinone oxidoreductase, B subunit n=1 Tax=S... 79 1e-13 UniRef50_Q5FU78 Putative uncharacterized protein n=1 Tax=Glucono... 79 2e-13 UniRef50_B0SCU6 Metal (Ni/Fe) hydrogenase, small subunit n=2 Tax... 79 2e-13 UniRef50_C7DI98 NADH-quinone oxidoreductase, B subunit n=1 Tax=C... 77 4e-13 UniRef50_A0L9R6 Membrane bound protein complex subunit mbxJ n=1 ... 77 6e-13 UniRef50_Q6L0U2 Formate hydrogenlyase subunit 7 n=1 Tax=Picrophi... 77 7e-13 UniRef50_D2R5G9 NADH-quinone oxidoreductase, B subunit n=2 Tax=P... 75 2e-12 UniRef50_B5ICA0 NADH ubiquinone oxidoreductase, 20 Kd subunit fa... 75 2e-12 UniRef50_B1ZRT2 NADH-quinone oxidoreductase subunit B 1 n=4 Tax=... 74 4e-12 UniRef50_Q04P25 Metal (Ni/Fe) hydrogenase, small subunit n=4 Tax... 74 4e-12 UniRef50_C9RJJ6 NADH-quinone oxidoreductase, B subunit n=1 Tax=F... 74 5e-12 UniRef50_A4WJL4 NADH-quinone oxidoreductase, B subunit n=6 Tax=T... 73 1e-11 UniRef50_Q64DY8 F420H2-quinone oxidoreductase 45 kD subunit n=8 ... 72 1e-11 UniRef50_Q6C2Q1 YALI0F06050p n=1 Tax=Yarrowia lipolytica RepID=Q... 71 3e-11 UniRef50_Q2WGH7 NADH dehydrogenase subunit K (Fragment) n=1 Tax=... 71 3e-11 UniRef50_UPI0001C31273 NADH-quinone oxidoreductase, B subunit n=... 71 4e-11 UniRef50_D2RET0 NADH-quinone oxidoreductase, B subunit n=1 Tax=A... 63 1e-08 UniRef50_B8D5A0 NADH-quinone oxidoreductase, B subunit n=1 Tax=D... 63 1e-08 UniRef50_Q0BPG7 Formate hydrogenlyase subunit 7 n=1 Tax=Granulib... 62 1e-08 UniRef50_B9SD17 NADH-ubiquinone oxidoreductase I subunit j, puta... 60 8e-08 UniRef50_UPI0000EC9F96 NADH dehydrogenase [ubiquinone] iron-sulf... 56 1e-06 UniRef50_UPI0000E81815 PREDICTED: hypothetical protein n=1 Tax=G... 55 2e-06 UniRef50_A8A9X3 NADH-quinone oxidoreductase, B subunit n=1 Tax=I... 52 1e-05 UniRef50_Q2H7B9 Putative uncharacterized protein n=1 Tax=Chaetom... 47 9e-04 UniRef50_Q9H3K5 My017 protein n=3 Tax=Eukaryota RepID=Q9H3K5_HUMAN 46 0.001 UniRef50_B7QG38 NADH-plastoquinone oxidoreductase, putative n=1 ... 45 0.002 UniRef50_UPI000194DF39 PREDICTED: similar to NADH-ubiquinone oxi... 45 0.003 UniRef50_C5A2R7 Coenzyme F420 hydrogenase subunit gamma (FrhG) n... 42 0.013 UniRef50_A5UWN9 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 41 0.030 UniRef50_B6YTV9 Coenzyme F420 hydrogenase gamma subunit n=1 Tax=... 41 0.035 >UniRef50_P16433 Formate hydrogenlyase subunit 7 n=169 Tax=Bacteria RepID=HYCG_ECOLI Length = 255 Score = 309 bits (791), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 156/251 (62%), Positives = 184/251 (73%), Gaps = 8/251 (3%) Query: 1 MSPVLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFD 60 + P + P+T+DE MK LL+ I+RSAYVYRVDCGGCN CEIEIFA ++P+FD Sbjct: 5 LGPRDANGIPVPMTVDESIASMKASLLKKIKRSAYVYRVDCGGCNGCEIEIFATLSPLFD 64 Query: 61 AERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHD 120 AERFGIKVV SPRHADILLFTGAVTRAMR PALRA++SAPD KIC+SYGACG GGIFHD Sbjct: 65 AERFGIKVVPSPRHADILLFTGAVTRAMRSPALRAWQSAPDPKICISYGACGNSGGIFHD 124 Query: 121 LYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQP-- 178 LY VWGG+D IVP+DV+IPGCPPTPAAT++GFA+ALGLL+QKIHA R P + QP Sbjct: 125 LYCVWGGTDKIVPVDVYIPGCPPTPAATLYGFAMALGLLEQKIHA---RGPGELDEQPAE 181 Query: 179 -LWPQIPPSQRIAIEREARRLAGYRQGREICDRLLRHLSDDPTGNRVNTWLRDADDPRLN 237 L + R+ ++REARRLAGYR GR+I D L L +V WL +DPRLN Sbjct: 182 ILHGDMVQPLRVKVDREARRLAGYRYGRQIADDYLTQLGQGE--EQVARWLEAENDPRLN 239 Query: 238 SIVQQLFRVLR 248 IV L V+ Sbjct: 240 EIVSHLNHVVE 250 >UniRef50_C6ANV6 Hydrogenase-4 component I n=6 Tax=Gammaproteobacteria RepID=C6ANV6_AGGAN Length = 258 Score = 301 bits (772), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 153/244 (62%), Positives = 189/244 (77%), Gaps = 3/244 (1%) Query: 3 PVLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAE 62 P+ +S P ++DE KMK+ LL++I+RSAYVYRVDCGGCN CEIEIF+ ITPVFDAE Sbjct: 6 PMPVNGISTPFSIDENIAKMKQALLKNIQRSAYVYRVDCGGCNGCEIEIFSTITPVFDAE 65 Query: 63 RFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLY 122 RFGIKVV+SPRHADILLFTG+VTRAMR PA+RAY++APD KIC++YGACG GGGIFHDLY Sbjct: 66 RFGIKVVASPRHADILLFTGSVTRAMRTPAMRAYQAAPDPKICIAYGACGCGGGIFHDLY 125 Query: 123 SVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQ 182 VWGGSD IVP+DV+IPGCPPTPAATI+GFA+ALGLL QK+ + + +P Sbjct: 126 CVWGGSDQIVPVDVYIPGCPPTPAATIYGFAMALGLLDQKLKGKQEKADPNAEAKLRFPT 185 Query: 183 IPPSQRIAIEREARRLAGYRQGREICDRLLRHLSDD---PTGNRVNTWLRDADDPRLNSI 239 IP RI++EREARRLAGYRQG I ++ + +S+D P G R+ +L DPRL+ I Sbjct: 186 IPLDLRISLEREARRLAGYRQGGNIANQFMAMMSEDDKVPFGVRLGEYLEREADPRLSEI 245 Query: 240 VQQL 243 + +L Sbjct: 246 INRL 249 >UniRef50_C7MLM8 Ni,Fe-hydrogenase III small subunit n=20 Tax=Bacteria RepID=C7MLM8_CRYCD Length = 283 Score = 283 bits (723), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 135/243 (55%), Positives = 171/243 (70%), Gaps = 2/243 (0%) Query: 7 QHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGI 66 Q+ +P LD++ + K LL DI+RS Y+YRVDCGGCN CEIEIF +TPVFDAERFGI Sbjct: 32 QYQLEPKVLDQKIAEAKAALLNDIKRSVYIYRVDCGGCNGCEIEIFGTLTPVFDAERFGI 91 Query: 67 KVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWG 126 K ++SPRHADIL++TGAVTRAMR+PALRAYE+APD K+ VSYGACG GGIFHD Y VWG Sbjct: 92 KNMASPRHADILVYTGAVTRAMRLPALRAYEAAPDPKLIVSYGACGCTGGIFHDNYCVWG 151 Query: 127 GSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPS 186 G+D + P+DV+IPGCPP+PA TI+GFA+ALGLL QK+H + G ++ IP Sbjct: 152 GTDKLFPVDVYIPGCPPSPAQTIYGFAMALGLLGQKLHEKHLVEGEGEQAPIMFADIPYK 211 Query: 187 QRIAIEREARRLAGYRQGREICDRLLRHL--SDDPTGNRVNTWLRDADDPRLNSIVQQLF 244 R +EREARR+AGY GR++ D ++ L D V+ + DPR I L Sbjct: 212 LRCELEREARRMAGYVYGRDLVDTFMQALEPEDGKVLTSVDALIEAESDPRKVEIYADLK 271 Query: 245 RVL 247 ++L Sbjct: 272 QIL 274 >UniRef50_B2N3C8 Hydrogenase-4 component I n=2 Tax=Enterobacteriaceae RepID=B2N3C8_ECOLX Length = 124 Score = 247 bits (630), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 119/119 (100%), Positives = 119/119 (100%) Query: 134 IDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIER 193 IDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIER Sbjct: 6 IDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIER 65 Query: 194 EARRLAGYRQGREICDRLLRHLSDDPTGNRVNTWLRDADDPRLNSIVQQLFRVLRGLHD 252 EARRLAGYRQGREICDRLLRHLSDDPTGNRVNTWLRDADDPRLNSIVQQLFRVLRGLHD Sbjct: 66 EARRLAGYRQGREICDRLLRHLSDDPTGNRVNTWLRDADDPRLNSIVQQLFRVLRGLHD 124 >UniRef50_UPI0001B52F0A hydrogenase 4, Fe-S subunit n=1 Tax=Shigella sp. D9 RepID=UPI0001B52F0A Length = 173 Score = 238 bits (607), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 119/142 (83%), Positives = 126/142 (88%), Gaps = 3/142 (2%) Query: 1 MSPVLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFD 60 MSPVLTQHVSQPITLDEQTQKMK+HLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFD Sbjct: 1 MSPVLTQHVSQPITLDEQTQKMKQHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFD 60 Query: 61 AERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHD 120 AERFGIKV+SSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACG GGG F Sbjct: 61 AERFGIKVISSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGAGGG-FST 119 Query: 121 LYSVWGGSDTIVPIDVWIPGCP 142 + + G + T P+ + G P Sbjct: 120 ISTASGAAAT--PLSPLMFGSP 139 >UniRef50_A7GWN3 HsdS n=9 Tax=Proteobacteria RepID=A7GWN3_CAMC5 Length = 274 Score = 222 bits (565), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 116/238 (48%), Positives = 156/238 (65%), Gaps = 26/238 (10%) Query: 14 TLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPR 73 T ++ T K++ L++I+RS VYR+DCG CN CEIEIFAAITP++D ERFG K+V++PR Sbjct: 12 TANDLTAKLEH--LKNIKRSFSVYRIDCGSCNGCEIEIFAAITPMWDPERFGFKLVANPR 69 Query: 74 HADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVP 133 HADIL+ +G VTR M P LRAYE+APD KI V++GACG GGIFHD YSVWGG D I+P Sbjct: 70 HADILICSGPVTRQMYYPLLRAYEAAPDPKIVVAFGACGSSGGIFHDAYSVWGGIDKIIP 129 Query: 134 IDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQR----- 188 +DV+IPGCPP PA+ I+G +ALG++ QK+H Y D + + PP ++ Sbjct: 130 VDVYIPGCPPHPASVIYGLGMALGIIDQKLHKKSYEDDSTLP--------PPVEKSVIGD 181 Query: 189 IAIER----EARRLAGYRQGREICDRLL---RHLSD--DPTGNRVNTW--LRDADDPR 235 I ER E++RL Y GR + D+ + + SD DP R ++ +DPR Sbjct: 182 ILFERDLQAESKRLMSYIFGRALFDKYMSAIKTASDVHDPNSARTAMLEAIKKEEDPR 239 >UniRef50_B1ZSE5 NADH ubiquinone oxidoreductase 20 kDa subunit n=14 Tax=Bacteria RepID=B1ZSE5_OPITP Length = 279 Score = 150 bits (378), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 68/150 (45%), Positives = 100/150 (66%), Gaps = 4/150 (2%) Query: 17 EQTQKMKRHLLQDIR----RSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSP 72 E+T+ + R L I RS ++ VD G CN CE+EI A P++D ERFGI +V+SP Sbjct: 130 EKTEALGRELQNRIHSLLGRSLHIREVDAGSCNGCEVEINALSGPIYDLERFGIHLVASP 189 Query: 73 RHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIV 132 RHAD+LL TG VTR M + + Y++ P+ ++ V+ GACG GG+F Y+ G D+++ Sbjct: 190 RHADMLLVTGPVTRNMELALRKTYDATPEPRLVVAVGACGCSGGMFGRNYATCGSVDSVL 249 Query: 133 PIDVWIPGCPPTPAATIHGFAVALGLLQQK 162 P+DV+IPGCPP P A +HG +A+G L+++ Sbjct: 250 PVDVYIPGCPPNPFALLHGILLAVGRLEKR 279 >UniRef50_A1RWL1 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWL1_THEPD Length = 245 Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 93/221 (42%), Positives = 129/221 (58%), Gaps = 26/221 (11%) Query: 23 KRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTG 82 K+ ++RS Y+ RVD G CN C+IE+F A+TP FD ER G+K+V SPR AD++L TG Sbjct: 6 KQKAYDALKRSVYLLRVDSGSCNGCDIEVFDALTPYFDVERLGVKLVLSPRMADVILVTG 65 Query: 83 AVTRAMRMPALRA-YESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGC 141 VTR +P L+A YE+AP + V+ GAC GGGI++D Y GG D ++P+DV+IPGC Sbjct: 66 PVTRQF-LPVLKATYEAAPKPCVVVACGACACGGGIWYDTYGTAGGVDKVIPVDVYIPGC 124 Query: 142 PPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQRI--------AIER 193 PP P A +HG AVAL +L+QK+ R T + P +P + A++ Sbjct: 125 PPRPHAILHGVAVALDILEQKVK----RSETKADAESFKPALPSLEGAINSWELYRALKL 180 Query: 194 EARRLAGYRQG-REICDRLLRHLSDDPTGNRVNTWLRDADD 233 E + GYR G R +CD L R++ +D DD Sbjct: 181 ELYKHLGYRIGYRVLCDLL-----------RISKGSKDLDD 210 >UniRef50_Q0W2C0 Hydrogenase, small subunit-like protein (HycG-like) n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W2C0_UNCMA Length = 247 Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 63/158 (39%), Positives = 98/158 (62%) Query: 5 LTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERF 64 L ++ +++++ + + RS + VD G CN CE+E+ + ++D ERF Sbjct: 88 LASKAKPDFDVESSGRELEKKIKKAFGRSLAIREVDAGSCNGCEVEVNSLSNAIYDIERF 147 Query: 65 GIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSV 124 G+ +V+SPRHAD LL TG VTR M +++Y + PD K+ ++ GAC + GGIF D Y+V Sbjct: 148 GLHIVASPRHADALLVTGPVTRNMERGLMQSYNATPDPKMVIAMGACAITGGIFRDSYAV 207 Query: 125 WGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQK 162 + G D +VP+DV+IPGCPP P A I G +A+ ++K Sbjct: 208 YNGVDALVPVDVYIPGCPPRPQAIIQGIMLAIDRWEEK 245 >UniRef50_A1ASR2 NADH ubiquinone oxidoreductase, 20 kDa subunit n=3 Tax=cellular organisms RepID=A1ASR2_PELPD Length = 179 Score = 144 bits (363), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 68/162 (41%), Positives = 101/162 (62%), Gaps = 1/162 (0%) Query: 22 MKRHLLQDI-RRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLF 80 M ++L Q + RS +VY + GGCN C+IE+ +TP +D ERFGIK+V SPRHAD++L Sbjct: 1 MLKNLCQKVFGRSLWVYHANSGGCNGCDIEVLNVLTPYYDVERFGIKLVGSPRHADVMLC 60 Query: 81 TGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPG 140 G R+ RAY + P K+ + G+C GGGI+HD Y+V G + ++P++ ++PG Sbjct: 61 QGPAMRSTGKALQRAYAAMPGPKLVFAIGSCACGGGIWHDSYAVHGPVEKLIPVNYYVPG 120 Query: 141 CPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQ 182 CPP P A I G AVA GL+ +K V+++ + M P+ Sbjct: 121 CPPRPEAIIWGVAVAAGLVDKKTAPVEFKQVSDFPMPRYHPE 162 >UniRef50_A3DKH2 NADH-quinone oxidoreductase, B subunit n=5 Tax=cellular organisms RepID=A3DKH2_STAMF Length = 165 Score = 143 bits (360), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 63/132 (47%), Positives = 87/132 (65%) Query: 30 IRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMR 89 IR + ++ + G CN C+IE+ AAITP++D ERFGIK+ S RHADIL+ TGAVT+ Sbjct: 27 IRYTPWLIHFNTGACNGCDIEVLAAITPLYDPERFGIKLAPSIRHADILVVTGAVTKKAA 86 Query: 90 MPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATI 149 R YE PD K V+ GAC + GG+FH+ YSV G+D ++P+D+++PGCPP P A + Sbjct: 87 ERLKRLYEQMPDPKFVVAVGACAISGGVFHNSYSVLAGTDKVIPVDIYVPGCPPRPEAIL 146 Query: 150 HGFAVALGLLQQ 161 G L L+ Sbjct: 147 DGIVKLLKRLES 158 >UniRef50_B8J1E3 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J1E3_DESDA Length = 185 Score = 139 bits (350), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 59/132 (44%), Positives = 85/132 (64%) Query: 32 RSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMP 91 +S ++ DCG CN C+IE+ A +TP++D ERFG+ +P+HAD+LL TG V R Sbjct: 14 KSPWIVHFDCGSCNGCDIEVLACLTPMYDVERFGVVNAGNPKHADVLLVTGTVNHRNRHV 73 Query: 92 ALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHG 151 + YE P K +S GAC + GG+F D Y+V G+ ++P+DV++PGCPP P A I G Sbjct: 74 LKQIYEQMPSPKAVISLGACNLSGGVFKDTYNVLNGAHNVIPVDVFVPGCPPKPEAIIDG 133 Query: 152 FAVALGLLQQKI 163 ALG+L+ K+ Sbjct: 134 VVEALGVLKAKM 145 >UniRef50_C8W241 Hydrogenase, small subunit-like protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W241_DESAS Length = 236 Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 64/157 (40%), Positives = 97/157 (61%), Gaps = 4/157 (2%) Query: 3 PVLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAE 62 PVLT P + ++ + ++ + + RS ++ VD G CN C+ EI + PV+D + Sbjct: 84 PVLTA----PASAEDLGRALREKIKKICHRSLHIRYVDAGACNGCDFEINSMTNPVYDIQ 139 Query: 63 RFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLY 122 ++G+ V+SPRHAD+LL TG VTR + + + YE+ P + V+ GAC GGG+F + Y Sbjct: 140 QYGVDFVASPRHADMLLVTGVVTRNLEIALHKTYEACPRPALVVAVGACACGGGVFKEAY 199 Query: 123 SVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLL 159 + GG D +P+DV++PGCPPTPA I G A+G L Sbjct: 200 ASGGGVDKFLPVDVYVPGCPPTPAQIIKGILTAIGRL 236 >UniRef50_B6YU96 Membrane bound hydrogenase, NiFe-hydrogenase small subunit n=13 Tax=cellular organisms RepID=B6YU96_THEON Length = 175 Score = 136 bits (343), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 65/145 (44%), Positives = 90/145 (62%) Query: 17 EQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHAD 76 E +K L + I RS +V+ V+ G CN C+IEI AA+TP +DAERFG+K+V SPRHAD Sbjct: 20 EMLEKRIAQLCRFIGRSPWVFHVNSGSCNGCDIEIIAALTPRYDAERFGVKLVGSPRHAD 79 Query: 77 ILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDV 136 +LL TG VT YE PD KI ++ G+C GG +F++ I+P+DV Sbjct: 80 VLLVTGPVTDQSLERVKLVYEQTPDPKIVIAVGSCPTGGSVFYESPFTNAPLSNIIPVDV 139 Query: 137 WIPGCPPTPAATIHGFAVALGLLQQ 161 ++PGCPP P A ++G +AL L + Sbjct: 140 YVPGCPPRPEAILYGVVLALEKLAK 164 >UniRef50_C7IG01 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IG01_9CLOT Length = 266 Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 64/140 (45%), Positives = 85/140 (60%) Query: 20 QKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILL 79 +K+ + + RS + VD G CN C+ EI A P D ERFGI V+SPRHAD+LL Sbjct: 127 KKLNEKVAKKFGRSLNIREVDAGSCNGCDYEIQALNGPYNDIERFGIHFVASPRHADMLL 186 Query: 80 FTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIP 139 TG V+R M ++ Y + P K+ V+ GAC GG+F D Y+ G DTI+P+DV+IP Sbjct: 187 VTGCVSRNMEEALVKTYNATPSPKLVVAAGACACSGGLFKDSYAGRNGIDTILPVDVYIP 246 Query: 140 GCPPTPAATIHGFAVALGLL 159 GCPP P A I+G +G L Sbjct: 247 GCPPRPQALIYGILKGIGRL 266 >UniRef50_B6IT61 Hydrogenase-4 component I n=4 Tax=Bacteria RepID=B6IT61_RHOCS Length = 196 Score = 134 bits (337), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 66/143 (46%), Positives = 87/143 (60%), Gaps = 4/143 (2%) Query: 7 QHVSQPITLDEQTQKMKRHLLQDIRR----SAYVYRVDCGGCNACEIEIFAAITPVFDAE 62 + ++ P D + + R L RR S + +VD G CNACE+EI A PV+D E Sbjct: 14 RTIAGPAPADATVEALARRLDTASRRRLGRSLAIRQVDAGSCNACEMEIHALNNPVYDLE 73 Query: 63 RFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLY 122 RFG V+SPRHAD+LL TG VT MR L+ +E+ PD K V+ G C + GG F D Y Sbjct: 74 RFGFSFVASPRHADVLLVTGPVTTNMREALLKTWEATPDPKWVVALGQCAIDGGPFADSY 133 Query: 123 SVWGGSDTIVPIDVWIPGCPPTP 145 +V GG + +VP+D+ IPGCPP P Sbjct: 134 AVVGGVEKVVPVDLMIPGCPPRP 156 >UniRef50_A6UVJ5 NADH ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=cellular organisms RepID=A6UVJ5_META3 Length = 246 Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 59/139 (42%), Positives = 85/139 (61%) Query: 14 TLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPR 73 TL E + + + +S Y+ V GGCNAC+ +I TPV+D RFGIK V+SPR Sbjct: 103 TLKEPDTSSLKSIKKLFGKSVYLREVCAGGCNACDADINVLNTPVYDLSRFGIKFVASPR 162 Query: 74 HADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVP 133 HAD L+ TG VT+ M + ++ Y++ P K ++ G C + GGIF + V GG D I+P Sbjct: 163 HADGLVITGPVTKNMELALMKTYDATPSPKFVIAVGTCAISGGIFRENEEVVGGVDKILP 222 Query: 134 IDVWIPGCPPTPAATIHGF 152 +D++IPGCPP P ++ F Sbjct: 223 VDLYIPGCPPHPFTNLYAF 241 >UniRef50_B9L8U0 Hydrogenase-4 component I n=2 Tax=Epsilonproteobacteria RepID=B9L8U0_NAUPA Length = 164 Score = 130 bits (328), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 60/138 (43%), Positives = 84/138 (60%) Query: 31 RRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRM 90 ++S ++ + GGCN C+IEI AA+ P +D ERFG+ +P+ +DILL TG VT+ R Sbjct: 9 KKSPWILHYNTGGCNGCDIEILAALAPKYDIERFGMLNRGNPKQSDILLVTGPVTKRCRD 68 Query: 91 PALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIH 150 R Y P+ K+ V+ GAC GGGIF D Y V G D I+P+DVWIPGC P A I Sbjct: 69 VLRRLYLEMPEPKVVVAMGACAHGGGIFRDFYHVENGVDNIIPVDVWIPGCAPRVEAVID 128 Query: 151 GFAVALGLLQQKIHAVDY 168 G A+ + ++K ++ Sbjct: 129 GMVEAVKIWEKKTKEKEF 146 >UniRef50_B6YWP9 NADH dehydrogenase (Ubiquinone), 20 kDa subunit n=4 Tax=Archaea RepID=B6YWP9_THEON Length = 191 Score = 130 bits (326), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 64/153 (41%), Positives = 89/153 (58%), Gaps = 11/153 (7%) Query: 30 IRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMR 89 ++ S +V+ ++ G CN C+IEI P D ER GIK+V SPRHAD + FTG +TR Sbjct: 2 VKNSLWVFHLNSGSCNGCDIEILNIFAPRNDVERLGIKLVGSPRHADAIAFTGPITRECL 61 Query: 90 MPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIV-----------PIDVWI 138 + A ++ P+ K+ ++ GAC GGGI++D YSV GG + P V+I Sbjct: 62 PKVIDALKAVPEPKVVLAIGACACGGGIWYDTYSVIGGVKELYRILKEEYNMEPPATVFI 121 Query: 139 PGCPPTPAATIHGFAVALGLLQQKIHAVDYRDP 171 PGCPP P A I+G AVA G+L+ K Y +P Sbjct: 122 PGCPPKPEAIIYGVAVASGMLESKQKKTVYVEP 154 >UniRef50_B2V8R1 NADH ubiquinone oxidoreductase 20 kDa subunit n=3 Tax=Aquificales RepID=B2V8R1_SULSY Length = 173 Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 60/146 (41%), Positives = 84/146 (57%), Gaps = 4/146 (2%) Query: 16 DEQTQKMKRHLLQDIRR----SAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSS 71 DE + + + L + I + S + VD G CNACE EI A P +D ERFG+K V+S Sbjct: 22 DENVEILGKQLKEKIDKYFQGSFAIREVDSGSCNACEYEISALSNPYYDIERFGVKFVAS 81 Query: 72 PRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTI 131 P+HAD ++ TG +TR M ++AYE+ P+ K ++ G C + GG F Y+V G Sbjct: 82 PKHADAIMITGCLTRNMYEAVMKAYENVPNPKFIIAVGDCALDGGTFKGSYAVMDGIKDK 141 Query: 132 VPIDVWIPGCPPTPAATIHGFAVALG 157 +PID+WI GCPP P I G + L Sbjct: 142 LPIDIWIKGCPPEPIDIISGLLILLN 167 >UniRef50_B2A054 NADH ubiquinone oxidoreductase 20 kDa subunit n=54 Tax=cellular organisms RepID=B2A054_OPITP Length = 338 Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 80/133 (60%) Query: 30 IRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMR 89 +R+S ++ D CN C+IE A +TP++D ER G+ +P+HADI L TGAV + Sbjct: 4 LRKSPWIIHYDASSCNGCDIETLACLTPLYDVERLGVINTGNPKHADIFLVTGAVNEQSK 63 Query: 90 MPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATI 149 Y P+ K+ V+ G C GGIF D Y++ GG D ++P+DV++PGC P A I Sbjct: 64 EVIRNIYHQLPEPKVVVAIGVCASSGGIFRDCYNIAGGVDRVIPVDVYVPGCAARPEAII 123 Query: 150 HGFAVALGLLQQK 162 G ALG+L++K Sbjct: 124 DGVVQALGVLERK 136 >UniRef50_B6YT72 Hydrogenase 4, component I or formate hydrogen lyase, subunit 7 n=3 Tax=cellular organisms RepID=B6YT72_THEON Length = 266 Score = 126 bits (316), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 73/202 (36%), Positives = 110/202 (54%), Gaps = 24/202 (11%) Query: 32 RSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMP 91 +S +V+ VD G CN C+IEI +TP +DAER GIK+V SPRHAD LL +G +TR Sbjct: 5 KSVWVFHVDSGSCNGCDIEILDVLTPYYDAERLGIKLVPSPRHADALLVSGPLTRQTYYA 64 Query: 92 ALRAYESAPDH-KICVSYGACGVGGGIFHDLYSVWG-----GSDTI-------------V 132 AYE+ P +I V+ G C GGIF++ Y ++ GSD + Sbjct: 65 VKAAYEAMPPKPRIVVAIGTCASSGGIFYNGYPIYNPNPERGSDRLRTGGIEVLLAEYGK 124 Query: 133 PIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIE 192 D++IPGCPP+P ++G A LGL ++K+ Y ++ + P+ P +RI + Sbjct: 125 KPDMYIPGCPPSPEEILYGLAQLLGLKEKKMKGEYY---YADEIEFVLPERPIEERIYLT 181 Query: 193 -REA-RRLAGYRQGREICDRLL 212 RE+ RR+ GY ++ + + Sbjct: 182 LRESLRRVVGYFDREKVLEDFM 203 >UniRef50_C7NUN9 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Halorhabdus utahensis DSM 12940 RepID=C7NUN9_HALUD Length = 183 Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 54/135 (40%), Positives = 81/135 (60%) Query: 31 RRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRM 90 RS ++ ++CG CN C+IE A+ P +D ERFGI+ +PRHAD+L+ TG VT+ M Sbjct: 10 NRSPWILHMNCGSCNGCDIETLDALMPRYDVERFGIQQKDTPRHADVLVATGPVTKQMAP 69 Query: 91 PALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIH 150 R YE P+ K+ ++ G+C GG+F D Y+ G D ++P+D+++PGCP +P I Sbjct: 70 RLERIYEQMPEPKLVIAAGSCAATGGVFQDCYNCHEGIDDVIPVDMYVPGCPISPETLID 129 Query: 151 GFAVALGLLQQKIHA 165 G L Q+ A Sbjct: 130 GIVALLEEAGQEAKA 144 >UniRef50_A9KS72 NADH ubiquinone oxidoreductase 20 kDa subunit n=3 Tax=cellular organisms RepID=A9KS72_CLOPH Length = 144 Score = 123 bits (308), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 56/137 (40%), Positives = 86/137 (62%), Gaps = 2/137 (1%) Query: 27 LQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTR 86 ++ +++S ++ D CN C+IE+ A +TP++D ERFGI +P+HADILL TG+V Sbjct: 1 MKFVKKSPWIIHYDGSSCNGCDIEVLACLTPLYDVERFGIINTGNPKHADILLITGSVNE 60 Query: 87 AMRMPALRA-YESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTP 145 +P ++ YE + KI V+ G C GGIF + Y+V GG D ++P+DV++PGC P Sbjct: 61 -QNIPVVKQIYEQMAEPKIVVAVGICANSGGIFAECYNVSGGVDKVLPVDVYVPGCAARP 119 Query: 146 AATIHGFAVALGLLQQK 162 A I G L +L++K Sbjct: 120 EAIIDGVVKGLAILEEK 136 >UniRef50_B2IID4 NADH ubiquinone oxidoreductase 20 kDa subunit n=9 Tax=Bacteria RepID=B2IID4_BEII9 Length = 177 Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 56/124 (45%), Positives = 78/124 (62%), Gaps = 1/124 (0%) Query: 30 IRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMR 89 + RS + VD G CN CE+EI A +D ERFG++ V+SPRHAD+LL TG VT MR Sbjct: 39 LGRSLAIREVDAGSCNGCELEINALGNAFYDLERFGLRFVASPRHADVLLVTGPVTHNMR 98 Query: 90 MPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVW-GGSDTIVPIDVWIPGCPPTPAAT 148 LR Y++ P+ K V+ G C +G G+F + Y+ GG ++ +D++IPGCPPTP Sbjct: 99 EALLRTYDATPNPKWVVAAGTCALGEGVFAESYACQKGGVSAVIAVDLYIPGCPPTPTDL 158 Query: 149 IHGF 152 + G Sbjct: 159 LKGL 162 >UniRef50_Q12F15 NADH ubiquinone oxidoreductase, 20 kDa subunit n=15 Tax=Proteobacteria RepID=Q12F15_POLSJ Length = 181 Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 57/137 (41%), Positives = 83/137 (60%) Query: 20 QKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILL 79 +++ R +L + ++ + VD G CN CE+EI A P ++ E GIK V+SPRHAD+LL Sbjct: 30 ERIHRDILLILGQALTIRAVDAGSCNGCELEIHALNNPYYNIEGLGIKFVASPRHADMLL 89 Query: 80 FTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIP 139 TG V+R M R Y++ P+ K+ V+ G CG GGIF D Y+ G ++P+DV +P Sbjct: 90 VTGPVSRHMDEALRRTYDATPEPKLVVAVGDCGCTGGIFGDSYASCGRVANVIPVDVTVP 149 Query: 140 GCPPTPAATIHGFAVAL 156 GCPP P + G A+ Sbjct: 150 GCPPPPIEILRGILTAV 166 >UniRef50_C5A2Q7 Formate hydrogenlyase II subunit H (Mhy2H) n=3 Tax=Thermococcus RepID=C5A2Q7_THEGJ Length = 283 Score = 119 bits (299), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 72/252 (28%), Positives = 127/252 (50%), Gaps = 34/252 (13%) Query: 32 RSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMP 91 RS YV+ +D G CN CEIE+F +TP +DAER G+++ +SPRHA + TG +TR Sbjct: 4 RSLYVFHLDTGACNGCEIELFDILTPYYDAERLGVRLAASPRHAHAMAATGPLTRQAYYA 63 Query: 92 ALRAYESAPDH-KICVSYGACGVGGGIFHDLYSVW---------------GG-------- 127 A A ++ P +I V+ G C GGIF++ Y ++ GG Sbjct: 64 AKEAIKAMPPKPRIIVAIGTCACSGGIFYNGYPIYRRPESGREGQEYPRRGGIFELVQDL 123 Query: 128 ---SDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIP 184 + + P+ V+IPGCPP P ++G A+ALGL+++++ Y + G + P +P I Sbjct: 124 RDEGEYVGPV-VYIPGCPPRPEEILYGVALALGLVEKQVKGEYYTEEVGFEL-PEYP-IE 180 Query: 185 PSQRIAIEREARRLAGYRQGREICDRLLRHLSDDPTGNRVNTWLR----DADDPRLNSIV 240 R+++ + + GY ++ + + ++ + ++ ++ DPR++ + Sbjct: 181 ERIRLSLRERLKYVVGYFDREKVLEDFMELVAKAKSAEELHGLIQGYCLKNPDPRVSLAM 240 Query: 241 QQLFRVLRGLHD 252 + L R L + Sbjct: 241 RVLEREFLRLKE 252 >UniRef50_Q24ST9 Formate hydrogenlyase subunit 7 n=2 Tax=Desulfitobacterium hafniense RepID=Q24ST9_DESHY Length = 155 Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 51/131 (38%), Positives = 82/131 (62%) Query: 15 LDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRH 74 L E+ + L+ +R+S ++ +DCG CN C+ E+ A + P++D +RFG+ V+SPRH Sbjct: 14 LSEKRLEQGEAHLRSLRQSWHIRHLDCGSCNGCDWEMSALLNPIYDLQRFGLDFVASPRH 73 Query: 75 ADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPI 134 ADIL+ TG ++ + AL YE P+ K ++ G C + GG+F + Y+ G +P+ Sbjct: 74 ADILMCTGPMSTHLIQAALATYEGTPNPKRIIAVGDCALDGGMFKEAYAAHNGVGEALPV 133 Query: 135 DVWIPGCPPTP 145 D+ IPGCPP+P Sbjct: 134 DIKIPGCPPSP 144 >UniRef50_A7I7C9 NADH ubiquinone oxidoreductase, 20 kDa subunit n=9 Tax=cellular organisms RepID=A7I7C9_METB6 Length = 172 Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 62/157 (39%), Positives = 92/157 (58%), Gaps = 5/157 (3%) Query: 1 MSPVLTQHVSQPITL-DEQTQKMKRHLLQDIR----RSAYVYRVDCGGCNACEIEIFAAI 55 +S +L + V+ P+ + DE+ +++ R + ++I RS + +D G NA EIEI Sbjct: 5 VSCMLGKKVTGPLPVRDEELERIGREIRREINARFGRSLAIRELDAGSDNAAEIEINNLS 64 Query: 56 TPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGG 115 +D ERFGI V+SPRHAD+LL TGA+T M + A + Y++ P K V+ G G Sbjct: 65 NAYYDVERFGISFVASPRHADVLLVTGAITCNMAIAAQKTYDAMPSPKFVVAVGDDACDG 124 Query: 116 GIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGF 152 GI+ Y+V GG+D I P+D+ IPG PP P + G Sbjct: 125 GIYKGTYAVLGGADAIFPVDLKIPGNPPAPIQILTGL 161 >UniRef50_D0L1N9 NADH ubiquinone oxidoreductase 20 kDa subunit n=3 Tax=Proteobacteria RepID=D0L1N9_HALNC Length = 274 Score = 116 bits (290), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 62/157 (39%), Positives = 90/157 (57%) Query: 9 VSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKV 68 +++P T D++ ++ + L RS ++ VD G CN CE EI A + P ++ R G+ Sbjct: 113 LARPATPDKKLEEKWQKSLAGFGRSLHIRHVDAGSCNGCESEISALLNPFYNLHRLGVFF 172 Query: 69 VSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGS 128 SPR AD+LL TG VT MR P LR +E+ P+ + ++ G C GGG Y+ G Sbjct: 173 TPSPRFADLLLVTGPVTEVMREPLLRTFEAMPEPRWVMALGTCATGGGTNGGGYACHQGL 232 Query: 129 DTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHA 165 D I+P+D+W+PGCPP PAA I V L Q++H Sbjct: 233 DGILPVDIWLPGCPPNPAAIIEALLVLLDRRPQQVHG 269 >UniRef50_A4EBM2 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBM2_9ACTN Length = 195 Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 79/134 (58%), Gaps = 2/134 (1%) Query: 30 IRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMR 89 + RS +V D CN C+IE+ A++TP+FDAERFG+ +P+HADI L TG+V A Sbjct: 5 MSRSPWVIHYDGSSCNGCDIEVLASLTPLFDAERFGVVNTGNPKHADIFLVTGSV-NAQN 63 Query: 90 MPALRA-YESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAAT 148 +P +R Y + K V+ G C GG+F D Y+V GG D +P+DV+ PGC P Sbjct: 64 LPVVRQIYNQMLEPKCVVACGICACSGGVFRDAYNVIGGVDRAIPVDVYAPGCAIRPETV 123 Query: 149 IHGFAVALGLLQQK 162 I A G+L QK Sbjct: 124 IDAIVEACGILDQK 137 >UniRef50_Q2T5T7 Formate hydrogenlyase subunit 7 n=21 Tax=Bacteria RepID=Q2T5T7_BURTA Length = 174 Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 57/138 (41%), Positives = 82/138 (59%) Query: 19 TQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADIL 78 Q +++ +L + R+ + +D G CN CE+E+ A P ++ E GIK V+SPRHAD+L Sbjct: 29 AQPIRQEILDILGRALCIRAIDAGSCNGCELELNALGNPYYNIEGLGIKFVASPRHADML 88 Query: 79 LFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWI 138 L TG +T MR AY++ P K+ V+ G C GG+F Y+V G +T+VP+DV I Sbjct: 89 LITGPLTLNMRDAVRLAYDATPAPKLVVAAGDCACTGGVFAGSYAVCGPVETLVPVDVAI 148 Query: 139 PGCPPTPAATIHGFAVAL 156 GCPP P + G AL Sbjct: 149 AGCPPRPIDLLRGIRGAL 166 >UniRef50_C6PUG1 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PUG1_9CLOT Length = 242 Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 52/143 (36%), Positives = 83/143 (58%) Query: 20 QKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILL 79 Q++K + +RS + VD G CN C +E+ +D R+GIK +SPRHAD ++ Sbjct: 100 QEVKEKIYSKFKRSLVLRSVDTGSCNGCMMEVSNTQNTYYDLSRYGIKFAASPRHADGIV 159 Query: 80 FTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIP 139 TG VT M+ ++ Y++ D KI ++ G+C GGIF D YSV + I+ +++ IP Sbjct: 160 VTGPVTLNMKEALIKTYDAISDPKIVIAVGSCAYSGGIFKDGYSVCEDLNEILKVNLVIP 219 Query: 140 GCPPTPAATIHGFAVALGLLQQK 162 GCPP+P A ++G + L ++ Sbjct: 220 GCPPSPQAILYGMLKIINKLDEE 242 >UniRef50_Q57936 Uncharacterized protein MJ0516 n=21 Tax=Euryarchaeota RepID=Y516_METJA Length = 148 Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 58/129 (44%), Positives = 80/129 (62%), Gaps = 3/129 (2%) Query: 22 MKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFT 81 M + L + +RS +V V+ GGCN C+IEI A + P +D E++GI V ++PR AD+LL T Sbjct: 1 MMKELFR--KRSIHVCVVNTGGCNGCDIEIVACLAPRYDIEQYGIYVHNNPREADVLLVT 58 Query: 82 GAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGC 141 G VT YE P+ KI V+ GAC + GGIF + + V GG D ++P+D IPGC Sbjct: 59 GPVTLQWAERLKEIYEKTPEPKIVVAVGACALSGGIFKEGHVV-GGVDKVIPVDAKIPGC 117 Query: 142 PPTPAATIH 150 PP P+ I Sbjct: 118 PPRPSEIIE 126 >UniRef50_Q0W6T1 [NiFe]-hydrogenase, small subunit (EchC-like) n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W6T1_UNCMA Length = 135 Score = 113 bits (283), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 57/132 (43%), Positives = 79/132 (59%), Gaps = 2/132 (1%) Query: 27 LQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTR 86 + I+RS +VY GGC C+IE+ A++ P +D ER G+++V SPR+AD+LL TG V Sbjct: 1 MNMIKRSPWVYHAHAGGCVGCDIELVASMGPRYDLERLGVRLVPSPRYADVLLVTGPVPL 60 Query: 87 AMRMPALRAYESAPDHKICVSYGACGVGGGIFHD--LYSVWGGSDTIVPIDVWIPGCPPT 144 + R Y P+ K ++ GACG G+F D YS+ G D I+P+DV IPGCPP Sbjct: 61 HTKPFLERVYAQTPEPKRVIAIGACGCSCGVFIDDENYSIAGPVDKIIPVDVKIPGCPPK 120 Query: 145 PAATIHGFAVAL 156 P A + G L Sbjct: 121 PEAIMEGIIKVL 132 >UniRef50_Q39SF9 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39SF9_GEOMG Length = 244 Score = 113 bits (282), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 63/133 (47%), Positives = 77/133 (57%), Gaps = 4/133 (3%) Query: 24 RHLLQDIRR----SAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILL 79 R L D+RR S V GGCNACE + T +D RFGI+ V+SPRHAD L Sbjct: 103 RPLPPDLRRLFGRSLKFREVSAGGCNACEADTNVLSTIGWDLGRFGIQFVASPRHADGLW 162 Query: 80 FTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIP 139 TG VT M L YE+ PD KI V+ GAC + GG + D V G D+IVP+D++IP Sbjct: 163 VTGPVTEHMAKALLTTYEAIPDPKIVVACGACAINGGPYIDTPQVCNGVDSIVPVDLYIP 222 Query: 140 GCPPTPAATIHGF 152 GCPP PA + G Sbjct: 223 GCPPHPATILDGL 235 >UniRef50_C5CEV5 NADH ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=cellular organisms RepID=C5CEV5_KOSOT Length = 137 Score = 113 bits (282), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 56/130 (43%), Positives = 75/130 (57%) Query: 30 IRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMR 89 ++RS +V+ V CN C+IEI +TP +D ERFGIK+V S RHAD+LL TG + Sbjct: 8 LKRSLWVFHVSASPCNNCDIEILDMLTPRYDLERFGIKLVGSVRHADVLLVTGMGGCKVS 67 Query: 90 MPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATI 149 +R Y AP ++ G C V G F + Y+ G D VP+D++IPGCPP P I Sbjct: 68 ERVIRIYNQAPKPVFVIAVGTCPVAGATFKESYTRCGPLDRFVPVDLYIPGCPPKPETMI 127 Query: 150 HGFAVALGLL 159 G + LG L Sbjct: 128 AGLSELLGRL 137 >UniRef50_B6YTX0 Hydrogenase 4, component I or formate hydrogen lyase, subunit 7 n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YTX0_THEON Length = 273 Score = 112 bits (281), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 69/211 (32%), Positives = 107/211 (50%), Gaps = 35/211 (16%) Query: 32 RSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMP 91 RS +V+ ++ G CN C+IEI +TP +D ERFGIK+V SPRHA LL +G +TR Sbjct: 8 RSIWVFHLNTGSCNGCDIEIIDVLTPFYDVERFGIKLVGSPRHAHALLVSGPLTRQAYYG 67 Query: 92 ALRAYESA-PDHKICVSYGACGVGGGIFHDLYSVW---------------GG-------- 127 A ++ P+ ++ V+ G C GGIF++ Y V+ GG Sbjct: 68 AKETIKAMPPEPRVIVAIGTCTCSGGIFYNGYPVYRRPESGREGSEYPRRGGIAELIADL 127 Query: 128 ---SDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRD---PTGVTMQPLWP 181 + + P+ ++IPGCPP P I+G A +GL+++K+ +Y D P + PL Sbjct: 128 RDEGEKVGPV-IYIPGCPPRPEEIIYGIAQLVGLVEKKLSYQEYSDELVPFKLPEGPLEE 186 Query: 182 QIPPSQRIAIEREARRLAGYRQGREICDRLL 212 +I R+ + R L GY +I + + Sbjct: 187 RI----RLTLMERLRHLVGYLDREKILEDFM 213 >UniRef50_B5E8B5 NADH ubiquinone oxidoreductase 20 kDa subunit n=13 Tax=Bacteria RepID=B5E8B5_GEOBB Length = 332 Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 72/210 (34%), Positives = 103/210 (49%), Gaps = 18/210 (8%) Query: 36 VYRVDCGGCNACEIEI-FAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALR 94 ++R++ G CN C++E+ A FD E+ G + P ADILL TG +T R ALR Sbjct: 15 LFRINTGSCNGCDVELAVTAAVDEFDVEQLGCRYTEEPHEADILLITGPLTVRARNEALR 74 Query: 95 AYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAV 154 Y AP+ K+ V+ G C V GG+F D Y+V G +P+D+ +PGCPP P A + G A Sbjct: 75 LYAEAPETKVTVAVGVCPVSGGVFRDSYAVDGPVQRYLPVDLNVPGCPPRPQALLAGIAQ 134 Query: 155 ALGLLQQKIHAVD---YRDPTGVTMQPLWPQIPPSQRIAIEREARRLAGYRQGREIC--- 208 A L + + VD P Q P R++ + +A R R +C Sbjct: 135 ARDLWRARSKGVDAVFAAPPLAKPADEPAQQFPIRGRMSFDPKA--CVDCRMCRHVCAAG 192 Query: 209 --------DRLLRHL-SDDPTGNRVNTWLR 229 D+ RHL S P+GN+ + LR Sbjct: 193 AIHFDIKGDKGDRHLRSQSPSGNKEDRHLR 222 >UniRef50_B8IYV4 NADH ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=Desulfovibrio RepID=B8IYV4_DESDA Length = 254 Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 52/123 (42%), Positives = 74/123 (60%) Query: 30 IRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMR 89 RRS + +V GCNACE + T VFD RFGI V+SPRHAD ++ TG V+ MR Sbjct: 127 FRRSLKLRQVSAAGCNACEADCNVLGTLVFDLPRFGIDFVASPRHADGIVLTGPVSENMR 186 Query: 90 MPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATI 149 + A+ Y + P+ ++ V+ GAC + GG+F D G I+P+D+++PGCPP P + Sbjct: 187 LAAIDTYNATPEPRLVVAVGACAISGGLFRDAPQCNNGIADILPVDLFVPGCPPNPWTIL 246 Query: 150 HGF 152 G Sbjct: 247 DGL 249 >UniRef50_A1SQ82 NADH ubiquinone oxidoreductase, 20 kDa subunit n=15 Tax=Actinomycetales RepID=A1SQ82_NOCSJ Length = 162 Score = 109 bits (273), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 52/117 (44%), Positives = 70/117 (59%) Query: 33 SAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPA 92 S + VD G CN CEIE+ A PV+DAER+G ++V+SPRHAD++L TG VT M P Sbjct: 37 SVQIRHVDAGSCNGCEIEVGGAFGPVYDAERYGARLVASPRHADVVLVTGVVTHNMLEPL 96 Query: 93 LRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATI 149 R E+ P ++ ++ G C G F Y V G V +D+ +PGCPP PAA + Sbjct: 97 RRTVEATPRPRLVLAVGDCARNCGAFKGGYGVAGAVHDAVDVDLEVPGCPPEPAAIV 153 >UniRef50_A3PKI1 NADH-quinone oxidoreductase subunit B 2 n=6 Tax=Proteobacteria RepID=NUOB2_RHOS1 Length = 205 Score = 107 bits (266), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 66/157 (42%), Positives = 92/157 (58%), Gaps = 10/157 (6%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVV-SSPRHADILLFTGAVTRAMRMPALRAYESAPD 101 G + C +E+ A+TPV+D RFG +V+ S+PR AD+L+ +G V R M +P R Y + Sbjct: 44 GLSCCYVEMATALTPVYDQARFGAEVIRSTPRQADLLIVSGTVFRKMAVPLYRLYSQMRE 103 Query: 102 HKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQ 161 + +S GAC GG++ D+YSV G D+ +P+DV++PGCPP P A + AL LLQ Sbjct: 104 PRWVISMGACANSGGMY-DIYSVVQGVDSFLPVDVYVPGCPPRPEALME----ALVLLQS 158 Query: 162 KIHAVDYRDPTGVTMQPLWPQIP--PSQRIAIEREAR 196 KI A + R P + M P P P R REAR Sbjct: 159 KI-ATEAR-PLQIRMGETGPARPFDPIPRRDALREAR 193 >UniRef50_A5FW47 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FW47_ACICJ Length = 264 Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 56/138 (40%), Positives = 76/138 (55%), Gaps = 1/138 (0%) Query: 28 QDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRA 87 + RRS +V VD G CN CE E+ A P ++ R GI SPR AD+LL TG VTRA Sbjct: 122 RGFRRSLHVRHVDAGSCNGCESELQALNNPFYNLHRLGIFFTPSPRFADLLLVTGPVTRA 181 Query: 88 MRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAA 147 M P R +E+ P + ++ G C V GGI G + +P+D+++PGCPP PAA Sbjct: 182 MLEPLRRTWEAMPAPRWVMASGTCAVSGGIAPG-GPCLSGLEEALPVDLYLPGCPPNPAA 240 Query: 148 TIHGFAVALGLLQQKIHA 165 I + LG Q++ Sbjct: 241 IIEALLMFLGRRAQRVRG 258 >UniRef50_A6Q6W5 Ni-Fe hydrogenase, small subunit HycG n=3 Tax=Epsilonproteobacteria RepID=A6Q6W5_SULNB Length = 168 Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 53/148 (35%), Positives = 81/148 (54%), Gaps = 4/148 (2%) Query: 9 VSQPITLDEQTQKMKRHLLQDIRR----SAYVYRVDCGGCNACEIEIFAAITPVFDAERF 64 +++ LD++ + +KR + +++++ S + VD G CNACE E A P +D ER Sbjct: 14 LTEDTALDKELEAIKREIKENVKKKFAGSLAIRMVDSGSCNACEAECNALSNPYYDLERL 73 Query: 65 GIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSV 124 GI V+SPRHAD++L G +T M L AY+ P+ K ++ GAC V F ++V Sbjct: 74 GIYFVASPRHADVMLLNGLMTFNMTPHVLDAYKQIPEPKWVITLGACPVMEAPFEKTFAV 133 Query: 125 WGGSDTIVPIDVWIPGCPPTPAATIHGF 152 + +P+ IPGCPP P I G Sbjct: 134 KAPAADHLPVAHHIPGCPPEPLEIIRGL 161 >UniRef50_D1B297 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B297_SULD5 Length = 138 Score = 103 bits (258), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 56/138 (40%), Positives = 80/138 (57%), Gaps = 3/138 (2%) Query: 30 IRRSAYVYRVDCGGCNACEIEIFAAIT-PVFDAERFGIKVVSSPRHADILLFTGAVTRAM 88 + + YVYR++ G CN C++EI A++ P F + G + P A+ILL TGA+T A Sbjct: 1 MNDTLYVYRINTGSCNGCDVEILASVLLPKFGFDALGCVYTNDPTLANILLVTGAIT-AR 59 Query: 89 RMPALRA-YESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAA 147 P L+A + P KI V+ G C + GG+F D Y++ G DT V +DV I GCPP+P Sbjct: 60 STPYLQAALKQLPSKKIVVALGICPISGGVFRDSYAITGPLDTFVDVDVNISGCPPSPKE 119 Query: 148 TIHGFAVALGLLQQKIHA 165 G A A L +++ HA Sbjct: 120 IAQGLAQACELWRERYHA 137 >UniRef50_C1XWY8 Ni,Fe-hydrogenase III small subunit n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XWY8_9DEIN Length = 290 Score = 103 bits (257), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 52/125 (41%), Positives = 72/125 (57%) Query: 39 VDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYES 98 V G + E+ A P D RFG VV+SPRHAD LL TG V++ MR R Y++ Sbjct: 133 VSAGNTGLDDTEVALAGNPFHDMSRFGFSVVASPRHADALLVTGPVSQNMREALWRTYQA 192 Query: 99 APDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGL 158 P+ K V+ G +GG IF + +V GG D +VP+DV++PG P PA+ +HG + G Sbjct: 193 TPEPKGVVAVGNEAIGGEIFAESAAVVGGVDQVVPVDVYVPGSPARPASILHGLLLLSGQ 252 Query: 159 LQQKI 163 QQ + Sbjct: 253 TQQVL 257 >UniRef50_B6GAA3 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GAA3_9ACTN Length = 228 Score = 102 bits (255), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 56/168 (33%), Positives = 87/168 (51%), Gaps = 3/168 (1%) Query: 32 RSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMP 91 +S ++ D CN C+IE+ ++ P++D ERFGI +P+HADI L TG+V A + Sbjct: 6 KSPWLIHYDGSSCNGCDIEVLDSMMPLYDIERFGIINTGNPKHADIFLVTGSV-NAQNIE 64 Query: 92 ALR-AYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIH 150 +R Y+ + K+ V+ G C GG+F D Y+V GG D +P+DV+ PGC P I Sbjct: 65 VVRHIYDQMLEPKVVVACGICACTGGVFRDCYNVIGGVDKAIPVDVYAPGCAVRPETIID 124 Query: 151 GFAVALGLLQQKIHAVDY-RDPTGVTMQPLWPQIPPSQRIAIEREARR 197 A+ +L +K + +DP + L P+ + E R Sbjct: 125 AVLKAVEILDEKAKLMAAGKDPATAPRKGLLPRKGCAASCGAEETGRE 172 >UniRef50_Q9DC70 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial n=57 Tax=cellular organisms RepID=NDUS7_MOUSE Length = 224 Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 51/122 (41%), Positives = 73/122 (59%), Gaps = 6/122 (4%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALR-AYESAPD 101 G C +E+ P +D +RFG+ +SPR AD+++ G +T M PALR Y+ P+ Sbjct: 96 GLACCAVEMMHMAAPRYDMDRFGVVFRASPRQADVMIVAGTLTNKM-APALRKVYDQMPE 154 Query: 102 HKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQ 161 + VS G+C GGG +H YSV G D IVP+D+++PGCPPT A ++G LQ+ Sbjct: 155 PRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGIL----QLQR 210 Query: 162 KI 163 KI Sbjct: 211 KI 212 >UniRef50_C7JEU9 NADH-ubiquinone oxidoreductase 20 kDa subunit n=8 Tax=Acetobacter pasteurianus RepID=C7JEU9_ACEP3 Length = 165 Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 54/138 (39%), Positives = 78/138 (56%) Query: 20 QKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILL 79 Q M+R R ++ VD GGC C +E+ A +D E G V+SPR+AD+LL Sbjct: 14 QDMRRMKPVGPRWPLLLFHVDTGGCGGCGMELQALRYAPYDMEGAGFGFVTSPRNADVLL 73 Query: 80 FTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIP 139 TGA+TRAM A+++ P K ++ G+C + GG+F + Y+V GG + V ID+ IP Sbjct: 74 ITGALTRAMAPVLEAAWQAMPTPKGLIAVGSCALDGGMFPENYTVLGGLERRVSIDLKIP 133 Query: 140 GCPPTPAATIHGFAVALG 157 GCPP P ++G G Sbjct: 134 GCPPAPQDVLNGLCSLFG 151 >UniRef50_A5UXK1 NADH-quinone oxidoreductase subunit B 1 n=13 Tax=Bacteria RepID=NUOB1_ROSS1 Length = 268 Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 52/124 (41%), Positives = 72/124 (58%), Gaps = 5/124 (4%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVV-SSPRHADILLFTGAVTRAMRMPALRAYESAPD 101 G C IE+ A FD RFG ++ +SPR AD+++ G VT+ M +R Y P+ Sbjct: 39 GLACCAIEMMATGLARFDLARFGAEMFRASPRQADLMIVAGTVTKKMAPQVVRLYNQMPE 98 Query: 102 HKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQ 161 + +S GAC GG F D Y+V G D ++P+DV+IPGCPP P A +H AL LQ+ Sbjct: 99 PRYVISMGACATSGGPFRDGYNVLRGIDLLIPVDVYIPGCPPRPEALLH----ALMTLQK 154 Query: 162 KIHA 165 +I A Sbjct: 155 QIDA 158 >UniRef50_O75251 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial n=638 Tax=cellular organisms RepID=NDUS7_HUMAN Length = 213 Score = 100 bits (250), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 51/123 (41%), Positives = 73/123 (59%), Gaps = 6/123 (4%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALR-AYESAPD 101 G C +E+ P +D +RFG+ +SPR +D+++ G +T M PALR Y+ P+ Sbjct: 85 GLACCAVEMMHMAAPRYDMDRFGVVFRASPRQSDVMIVAGTLTNKM-APALRKVYDQMPE 143 Query: 102 HKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQ 161 + VS G+C GGG +H YSV G D IVP+D++IPGCPPT A ++G LQ+ Sbjct: 144 PRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYIPGCPPTAEALLYGIL----QLQR 199 Query: 162 KIH 164 KI Sbjct: 200 KIK 202 >UniRef50_Q58758 Uncharacterized protein MJ1363 n=17 Tax=Euryarchaeota RepID=Y1363_METJA Length = 151 Score = 100 bits (249), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 52/134 (38%), Positives = 78/134 (58%), Gaps = 8/134 (5%) Query: 31 RRSAYVYRVDCGGCNACEIEIFAAI-TPVFDAERFGIKVVSSPRHADILLFTGAVTRAMR 89 ++ +V V GGCNAC+IE+ AI +P +DAE++ + + +PR ADIL+ TG VT+ + Sbjct: 11 KKCIHVMLVYTGGCNACDIEVVNAIFSPFYDAEQYNVFLTFNPREADILVVTGCVTKVVA 70 Query: 90 MPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSD-------TIVPIDVWIPGCP 142 + YE P+ K V+ GAC + GG++ ++ G SD I+P+DV +PGC Sbjct: 71 ESLRKIYEKIPEPKAVVAVGACALMGGVYKNIGGDLGTSDFVAGPVENIIPVDVKVPGCA 130 Query: 143 PTPAATIHGFAVAL 156 P P I G AL Sbjct: 131 PRPEDIIAGIVKAL 144 >UniRef50_Q0BSK3 NADH-quinone oxidoreductase subunit B n=31 Tax=cellular organisms RepID=NUOB_GRABC Length = 194 Score = 99.8 bits (247), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 48/121 (39%), Positives = 71/121 (58%), Gaps = 4/121 (3%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDH 102 G C +E+ A P +D +RFG+ +SPR +D+++ G +T M R Y+ P+ Sbjct: 69 GLACCAVEMIHAYMPRYDLDRFGVIPRASPRQSDVMIVAGTLTNKMAPALRRVYDQMPEP 128 Query: 103 KICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQK 162 + +S G+C GGG +H YSV G D IVP+DV++PGCPPT A ++G LQ+K Sbjct: 129 RWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALVYGIM----QLQKK 184 Query: 163 I 163 I Sbjct: 185 I 185 >UniRef50_A6LXQ4 NADH-quinone oxidoreductase subunit B n=4 Tax=Bacteria RepID=NUOB_CLOB8 Length = 169 Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 51/123 (41%), Positives = 72/123 (58%), Gaps = 4/123 (3%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVV-SSPRHADILLFTGAVTRAMRMPALRAYESAPD 101 G C IE+ AA +D RFG +V +SPR AD+++ G +T M + Y+ P+ Sbjct: 42 GLACCAIEMMAAGGARYDIARFGYEVFRASPRQADLMIVAGTITEKMAPIVKKIYDQMPE 101 Query: 102 HKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQ 161 K ++ G+C GG F D Y+V G+DT +P+DV+IPGCPP P A IHG L L ++ Sbjct: 102 PKWVIAMGSCATSGGPFVDSYNVVPGADTFLPVDVYIPGCPPRPEALIHGL---LTLKEK 158 Query: 162 KIH 164 IH Sbjct: 159 IIH 161 >UniRef50_C5GDP9 NADH-ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=Ajellomyces dermatitidis RepID=C5GDP9_AJEDR Length = 245 Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 57/146 (39%), Positives = 81/146 (55%), Gaps = 10/146 (6%) Query: 16 DEQTQKMKRHLLQDIR------RSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVV 69 DE+T M H L I R A ++ + G C +E+ A P +D +R G Sbjct: 85 DEKTGTMG-HFLGSIDAVANWGRQASLWPISLG-LACCGLEMMAVSMPRYDQDRLGTIFR 142 Query: 70 SSPRHADILLFTGAVTRAMRMPALR-AYESAPDHKICVSYGACGVGGGIFHDLYSVWGGS 128 +SPR +D+L+ G VT M PALR Y+ PD K +S G+C GGG +H YSV G Sbjct: 143 ASPRQSDLLIVAGTVTNKM-APALRLVYDQMPDPKWVISMGSCANGGGYYHYSYSVVRGV 201 Query: 129 DTIVPIDVWIPGCPPTPAATIHGFAV 154 D ++P+DV++PGCPPT A ++ +V Sbjct: 202 DRLLPVDVYLPGCPPTAEALMYAISV 227 >UniRef50_B8HLE8 NAD(P)H-quinone oxidoreductase subunit K 2 n=94 Tax=cellular organisms RepID=NDHK2_CYAP4 Length = 259 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 60/170 (35%), Positives = 90/170 (52%), Gaps = 11/170 (6%) Query: 1 MSPVLTQHVSQPITLDEQTQKMKRHL----LQDIRRSAYVYRVD--CGGCNACEIEIFAA 54 MS L + PI+ E ++ ++ L DI A + + G C IE A Sbjct: 1 MSTPLDHSIRNPISSAEVPPELSENIILTSLDDIYNWARISSIYPLMYGTACCFIEFAAM 60 Query: 55 ITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVG 114 I FD ERFG+ +SPR AD+++ G +T M +P R Y+ P+ K ++ GAC + Sbjct: 61 IASRFDMERFGMFPRASPRQADLIILAGTLTMQMAVPTRRLYDQMPEPKYVIAMGACMIT 120 Query: 115 GGIFH-DLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKI 163 GG+F D + G+D ++PIDV+IPGCPP P A + A+ L++KI Sbjct: 121 GGMFSADSPTALRGADKLLPIDVYIPGCPPRPEAILD----AVTKLRKKI 166 >UniRef50_B9L626 NADH-ubiquinone oxidoreductase 20 kDa subunit n=3 Tax=Epsilonproteobacteria RepID=B9L626_NAUPA Length = 157 Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 51/143 (35%), Positives = 77/143 (53%), Gaps = 9/143 (6%) Query: 41 CGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAP 100 C GC C +E+ AA+ P +D ER+G + +PR ADI+ TG V++ + LR YE P Sbjct: 22 CSGC--CSLEMLAAMGPRYDWERYGYIMTPTPRQADIMFITGLVSKKILPALLRTYEQMP 79 Query: 101 DHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQ 160 + + V+ GAC GG ++D SV I+P DV++ GCPP P A I G L+ Sbjct: 80 EPRYVVAIGACAYDGGPYNDSVSVIKNMTEILPADVFVAGCPPRPEAIIAG-------LE 132 Query: 161 QKIHAVDYRDPTGVTMQPLWPQI 183 + + +P+ + LW Q+ Sbjct: 133 ELKEKIKRGEPSASSQGGLWKQM 155 >UniRef50_Q1AVI4 NADH-quinone oxidoreductase subunit B n=15 Tax=Bacteria RepID=NUOB_RUBXD Length = 251 Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 53/133 (39%), Positives = 72/133 (54%), Gaps = 8/133 (6%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVVS-SPRHADILLFTGAVTRAMRMPALRAYESAPD 101 G C IE+ + D ERFG + SPR AD+++ +G V+ M R YE P+ Sbjct: 35 GLACCAIEMMSTGMAHNDLERFGAGFFAGSPRQADVMIVSGTVSTKMAERMTRLYEQMPE 94 Query: 102 HKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQ 161 K ++ GAC + GG F D YSV G+D ++P+DV++PGCPP P A I G LQ+ Sbjct: 95 PKWVIAMGACAISGGPFLDGYSVLMGADRVIPVDVYVPGCPPRPEALIFGIMT----LQK 150 Query: 162 KI---HAVDYRDP 171 KI V Y P Sbjct: 151 KIEREQQVGYEKP 163 >UniRef50_A4J659 NADH-quinone oxidoreductase subunit B n=34 Tax=Firmicutes RepID=NUOB_DESRM Length = 196 Score = 97.4 bits (241), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 50/112 (44%), Positives = 67/112 (59%), Gaps = 2/112 (1%) Query: 43 GCNACEIE-IFAAITPVFDAERFGIKVV-SSPRHADILLFTGAVTRAMRMPALRAYESAP 100 G C IE + AA FD RFG +V+ +SPR AD++L G VT+ +R YE Sbjct: 66 GLACCAIEGLMAANMARFDLARFGYEVMRASPRQADVMLVCGTVTKKAAPFVVRLYEQMA 125 Query: 101 DHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGF 152 + K ++ G+C + GG F D YSV G D ++P+DV+IPGC P P A IHGF Sbjct: 126 EPKYVIAMGSCAISGGPFVDSYSVVPGVDKLIPVDVYIPGCAPRPDAVIHGF 177 >UniRef50_Q3A825 NADH-quinone oxidoreductase subunit B/C/D n=103 Tax=cellular organisms RepID=NUBCD_PELCD Length = 794 Score = 96.3 bits (238), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 48/122 (39%), Positives = 74/122 (60%), Gaps = 6/122 (4%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVV-SSPRHADILLFTGAVTRAMRMPALRAYESAPD 101 G + C +E+ ++TP FD RFG +V+ +PR AD+++ G + M LR YE + Sbjct: 32 GLSCCFVEMMGSMTPRFDLARFGAEVLRGTPREADLMVIAGTPFKKMAASMLRVYEEMAN 91 Query: 102 HKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQ 161 K ++ G+C GG++ D+YSV G + ++P+DV+IPGCPP P A + G L LQ+ Sbjct: 92 PKWVIAMGSCANSGGMY-DVYSVMQGVNQVLPVDVYIPGCPPRPEAFMQG----LMTLQE 146 Query: 162 KI 163 KI Sbjct: 147 KI 148 >UniRef50_A9A345 NADH-quinone oxidoreductase, B subunit n=1 Tax=Nitrosopumilus maritimus SCM1 RepID=A9A345_NITMS Length = 174 Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 51/125 (40%), Positives = 74/125 (59%), Gaps = 7/125 (5%) Query: 47 CEIEIFAAITPVFDAERFGI-KVVSSPRHADILLFTGAVTRAMRMPALR-AYESAPDHKI 104 C +E AA +P +D ERFGI + S R D+++ G +TR M P LR Y+ P+ K Sbjct: 52 CSVEFGAASSPRYDVERFGIIEAFGSLRQCDLVVVQGTITRKM-APRLRLVYDQMPEPKY 110 Query: 105 CVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIH 164 ++ GAC + GG++ D Y+V G D ++P+DV++PGCPP P I G LLQ+KI Sbjct: 111 VIAMGACAITGGLYFDSYNVLPGIDGVIPVDVYVPGCPPRPETLIQGCI----LLQEKIK 166 Query: 165 AVDYR 169 + R Sbjct: 167 RMKAR 171 >UniRef50_B3QY47 NADH-quinone oxidoreductase subunit B 2 n=8 Tax=Bacteria RepID=NUOB2_CHLT3 Length = 195 Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 54/154 (35%), Positives = 82/154 (53%), Gaps = 5/154 (3%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDH 102 G C IE+ A +D ERFGI SSPR +D+++ G VT M +R YE P+ Sbjct: 36 GLACCAIEMMATNASNYDLERFGIFPRSSPRQSDLMIVAGTVTFKMAERVVRLYEQMPEP 95 Query: 103 KICVSYGAC-GVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQ 161 + +S G+C GG + Y V G D I+P+DV++PGCPP P A I G L+++ Sbjct: 96 RYVLSMGSCSNCGGPYWEHGYHVVKGVDRIIPVDVYVPGCPPRPEALIGGLMKVQELIRE 155 Query: 162 KIHAVDYRDPTGVTMQPLWPQIPPSQRIAIEREA 195 + A D R+ ++ L P+ ++ + +E A Sbjct: 156 EKFAGDRRE----AIERLKPKKVKAEDVIVETSA 185 >UniRef50_C5U7Y6 NADH ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=Euryarchaeota RepID=C5U7Y6_9EURY Length = 154 Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 47/140 (33%), Positives = 80/140 (57%), Gaps = 8/140 (5%) Query: 31 RRSAYVYRVDCGGCNACEIE-IFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMR 89 ++ +V V GGCN C+IE + A +P +DAE++ + + +PR DIL+ +G VT+ ++ Sbjct: 15 KKCIHVMLVYTGGCNGCDIEAVNAVFSPYYDAEQYNVFLTFNPRETDILIVSGCVTKFVK 74 Query: 90 MPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSD-------TIVPIDVWIPGCP 142 + YE P+ K V+ G+C + GG++ ++ G SD I+P+DV +PGC Sbjct: 75 ESLRKIYEKIPEPKAVVAIGSCALTGGVYKNIGGDLGTSDFVAGPVENIIPVDVKVPGCA 134 Query: 143 PTPAATIHGFAVALGLLQQK 162 P P I G A+ L+ ++ Sbjct: 135 PRPEDIISGIVKAIPLVVER 154 >UniRef50_C1A8Z3 NADH-quinone oxidoreductase chain B n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8Z3_GEMAT Length = 212 Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 55/131 (41%), Positives = 74/131 (56%), Gaps = 6/131 (4%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVVS-SPRHADILLFTGAVTRAMRMPALRAYESAPD 101 G C IE A FD RFG++ +S SPR AD+LL G V + R Y+ P Sbjct: 49 GTACCAIEFMATAASRFDLSRFGMERLSYSPRQADVLLCAGRVPLKLAPVLRRIYQQMPQ 108 Query: 102 HKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQ 161 K +S GAC GG+F D Y+V G DTI+P+DV++PGCPP P A +H A+ +LQ+ Sbjct: 109 PKWVISMGACASTGGMF-DNYAVVQGIDTIIPVDVYVPGCPPRPEALMH----AIIMLQK 163 Query: 162 KIHAVDYRDPT 172 K+ +D T Sbjct: 164 KVMQERLKDST 174 >UniRef50_O21272 NADH-ubiquinone oxidoreductase 20 kDa subunit n=5 Tax=Eukaryota RepID=NDUS7_RECAM Length = 182 Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 50/123 (40%), Positives = 72/123 (58%), Gaps = 6/123 (4%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALR-AYESAPD 101 G C +E+ + +D +RFGI SPR +D+++ G +T M PALR Y+ + Sbjct: 54 GLACCAVEMMHSAASRYDLDRFGIIFRPSPRQSDVMIVAGTLTNKM-APALRKVYDQMSE 112 Query: 102 HKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQ 161 + VS G+C GGG +H YSV G D IVP+D+++PGCPPT A ++G L LQ+ Sbjct: 113 PRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYG----LLQLQK 168 Query: 162 KIH 164 KI Sbjct: 169 KIK 171 >UniRef50_B5YKI3 NADH-quinone oxidoreductase subunit B 1 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=NUOB1_THEYD Length = 199 Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 49/121 (40%), Positives = 70/121 (57%), Gaps = 5/121 (4%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDH 102 G C IE+ A +D +RFGI + ++PR AD+++ G VT+ M + Y P+ Sbjct: 49 GLACCAIEMMATAASHYDLDRFGIIMRATPRQADVMIIAGTVTKKMAPVIVNLYHQMPEP 108 Query: 103 KICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQK 162 + ++ G+C GGIF + YS G D I+P+DV+IPGCPP P A I G L LQ+K Sbjct: 109 RYVIAMGSCACSGGIF-NTYSTVQGVDEILPVDVYIPGCPPRPEALIEG----LLKLQEK 163 Query: 163 I 163 I Sbjct: 164 I 164 >UniRef50_D2EGC1 NADH-quinone oxidoreductase, B subunit n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EGC1_9EURY Length = 172 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 45/121 (37%), Positives = 67/121 (55%), Gaps = 1/121 (0%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVVS-SPRHADILLFTGAVTRAMRMPALRAYESAPD 101 G + C IE+ DA+R G+ SPR +D++L +G +T+ M L YE PD Sbjct: 42 GTSCCAIEMMTFGATKVDADRLGVLFNGDSPRQSDLILVSGTITKKMARRLLNVYEQIPD 101 Query: 102 HKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQ 161 K ++ GAC V GG++HD Y+ G D I+P+D +IPGCPP P + V L+++ Sbjct: 102 PKYVIAVGACNVSGGLYHDSYNTIEGIDRIMPVDAFIPGCPPRPEEFLDAVRVLQKLIKE 161 Query: 162 K 162 Sbjct: 162 N 162 >UniRef50_C9RKY2 NADH-quinone oxidoreductase, B subunit n=2 Tax=cellular organisms RepID=C9RKY2_FIBSS Length = 419 Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 51/131 (38%), Positives = 74/131 (56%), Gaps = 6/131 (4%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVV-SSPRHADILLFTGAVTRAMRMPALRAYESAPD 101 G + C IE+ ++ +D RFG +V SSPR AD+ + G +TR M +E P Sbjct: 42 GTSCCAIEMMSSSMARYDIARFGSEVFRSSPRQADLFILAGTITRRMAPAIQMLWEQIPG 101 Query: 102 HKICVSYGACGVGGGIF-HDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQ 160 K ++ GAC + GG F +D YSV G+ ++P+DV++PGCPP P A HG L L+ Sbjct: 102 PKYVIAMGACTISGGPFIYDNYSVVRGAQNLIPVDVFVPGCPPRPEALFHG----LLTLR 157 Query: 161 QKIHAVDYRDP 171 +KI R+P Sbjct: 158 EKILKETCRNP 168 >UniRef50_A6DAC3 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DAC3_9PROT Length = 140 Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 48/135 (35%), Positives = 79/135 (58%), Gaps = 7/135 (5%) Query: 36 VYRVDCGGCNACEIEIFAAI-TPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALR 94 ++R++ G CN C++EI A++ + FD ++ G + + + ADI + TG VT A +P L+ Sbjct: 9 IFRINTGSCNGCDVEIAASVMSSRFDLQKLGCEYIETSEDADIFMITGPVT-ARSLPFLK 67 Query: 95 AYESAPDHK---ICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHG 151 E +HK + +S G C V GIF D Y + G D+ V +DV + GCPP P A + G Sbjct: 68 --EVIKNHKKPYVVISLGTCSVTCGIFRDSYPILGPVDSYVNVDVNVAGCPPRPQAILEG 125 Query: 152 FAVALGLLQQKIHAV 166 A+ +L++K + + Sbjct: 126 VKTAIDILKRKNNEI 140 >UniRef50_A5TDF9 NADH-quinone oxidoreductase, B subunit n=2 Tax=pseudomallei group RepID=A5TDF9_BURMA Length = 293 Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 47/121 (38%), Positives = 69/121 (57%), Gaps = 4/121 (3%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDH 102 G C +E+ A +D +RFG+ +SPR D+++ G +T M R Y+ + Sbjct: 162 GLACCAVEMMHAAGARYDMDRFGMIPRASPRQCDLMIVAGTLTNKMAPAMRRVYDQMAEP 221 Query: 103 KICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQK 162 + VS G+C GGG +H YSV G D IVP+DV++PGCPPT A ++G L LQ+K Sbjct: 222 RYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALVYG----LMQLQRK 277 Query: 163 I 163 + Sbjct: 278 V 278 >UniRef50_A0RY66 NADH-ubiquinone oxidoreductase, subunit B n=3 Tax=Thaumarchaeota RepID=A0RY66_CENSY Length = 160 Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 51/125 (40%), Positives = 73/125 (58%), Gaps = 7/125 (5%) Query: 47 CEIEIFAAITPVFDAERFGI-KVVSSPRHADILLFTGAVTRAMRMPALR-AYESAPDHKI 104 C +E AA P +D ERFGI + S R D+++ G +TR M P LR Y+ P+ K Sbjct: 38 CSVEFGAASGPKYDVERFGIIEAFGSLRQCDLIVVQGTITRKM-APRLRLVYDQMPEPKY 96 Query: 105 CVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIH 164 ++ GAC + GG++ D Y+V G D ++P+DV++PGCPP P I G LLQ+KI Sbjct: 97 VIAMGACAITGGLYFDSYNVLPGIDGVLPVDVYVPGCPPRPETLIQGCM----LLQEKIK 152 Query: 165 AVDYR 169 + R Sbjct: 153 RMRAR 157 >UniRef50_A3ETD3 Putative hydrogenase-3 (HycG) n=3 Tax=Leptospirillum RepID=A3ETD3_9BACT Length = 169 Score = 94.0 bits (232), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 47/114 (41%), Positives = 65/114 (57%) Query: 33 SAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPA 92 S + VD G CNACE+E+ A + ER GI+ V+SPRHAD+LL TG V+ M P Sbjct: 35 SLSIRHVDAGSCNACELELHAMNGSYYAPERDGIRFVASPRHADLLLVTGPVSCQMEQPL 94 Query: 93 LRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPA 146 L +E+ K ++ G C GG+F +V G D + P +PGCPP+P+ Sbjct: 95 LDTHEAMASPKTVLAVGDCACQGGVFRGSPAVRNGVDGLFPEARKVPGCPPSPS 148 >UniRef50_B0TH78 NADH-quinone oxidoreductase subunit B n=5 Tax=Bacteria RepID=NUOB_HELMI Length = 175 Score = 94.0 bits (232), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 46/111 (41%), Positives = 63/111 (56%), Gaps = 1/111 (0%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVV-SSPRHADILLFTGAVTRAMRMPALRAYESAPD 101 G C IE+ A FD RFG +V SPR AD+++ G +T M R YE P+ Sbjct: 46 GLACCAIEMMATGASRFDMARFGYEVFRPSPRQADLIIIAGTLTWKMAPAIQRVYEQMPE 105 Query: 102 HKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGF 152 K ++ G+C GG F D Y+V G D ++P+DV++PGCPP P A + GF Sbjct: 106 PKWIIAMGSCACTGGPFADSYAVVPGVDKVIPVDVYVPGCPPRPEALLDGF 156 >UniRef50_Q8DKZ4 NAD(P)H-quinone oxidoreductase subunit K n=21 Tax=cellular organisms RepID=NDHK_THEEB Length = 237 Score = 94.0 bits (232), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 56/165 (33%), Positives = 87/165 (52%), Gaps = 7/165 (4%) Query: 2 SPVLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRV--DCGGCNACEIEIFAAITPVF 59 SP + +++P E + + L D+ A + + G C IE A I F Sbjct: 6 SPAILNPIARPEVPQELAENIILTSLNDVYDWARLSSLWPLMYGTACCFIEFAAMIGSRF 65 Query: 60 DAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIF- 118 D +RFG+ +SPR AD+++ +G +T M +R YE P K ++ GAC + GG+F Sbjct: 66 DFDRFGLVPRNSPRQADLIITSGTITMKMAPALVRLYEQMPSPKYVIAMGACTITGGMFS 125 Query: 119 HDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKI 163 D YS G D ++P+DV++PGCPP P A + A+ L++KI Sbjct: 126 SDSYSAVRGVDKLIPVDVYLPGCPPRPEAIMD----AIVKLRKKI 166 >UniRef50_C7IWD0 Os01g0791600 protein n=3 Tax=Oryza sativa Japonica Group RepID=C7IWD0_ORYSJ Length = 379 Score = 94.0 bits (232), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 45/101 (44%), Positives = 61/101 (60%), Gaps = 1/101 (0%) Query: 59 FDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIF 118 FD +R+G+ SSPR AD++L G VT M +R YE P+ K ++ GAC + GG+F Sbjct: 153 FDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMF 212 Query: 119 H-DLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGL 158 D YS G D ++P+DV++PGCPP P A I LGL Sbjct: 213 STDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDALTKLLGL 253 >UniRef50_Q978D5 Formate hydrogenlyase subunit 2 n=2 Tax=Thermoplasmatales RepID=Q978D5_THEVO Length = 222 Score = 93.6 bits (231), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 49/132 (37%), Positives = 72/132 (54%), Gaps = 16/132 (12%) Query: 30 IRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMR 89 RRS +V+ +D G C AC +E + +P +DA R GI +V++PR+AD L+ G +T M+ Sbjct: 85 FRRSFHVFPIDSGACGACNMEFLSIFSPQYDANRLGIFMVNTPRYADALIVMGVMTPGMK 144 Query: 90 MPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPID-----VWIPGCPPT 144 RAYE+ P+ K+ ++ GAC V GGI + P+D V I GCPP+ Sbjct: 145 EALDRAYEAMPEPKLVIAMGACAVTGGIMGE-----------NPLDREKYNVEIAGCPPS 193 Query: 145 PAATIHGFAVAL 156 P I A+ Sbjct: 194 PYTLIAALNAAM 205 >UniRef50_B1W4V9 NADH-quinone oxidoreductase subunit B 2 n=27 Tax=Bacteria RepID=NUOB2_STRGG Length = 235 Score = 93.6 bits (231), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 61/159 (38%), Positives = 80/159 (50%), Gaps = 10/159 (6%) Query: 20 QKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFG-IKVVSSPRHADIL 78 + MK L R S +V+ G C IE AA D R G I PR AD++ Sbjct: 40 EPMKVVLNWGRRYSLWVFNF---GLACCAIEFIAASMARHDFIRLGVIPFAPGPRQADLM 96 Query: 79 LFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWI 138 + +G VT M R YE P+ K +S+GAC GG + D YSV G D I+P+DV++ Sbjct: 97 IVSGTVTDKMAPAVKRLYEQMPEPKYVISFGACSNCGGPYWDSYSVTKGVDQIIPVDVYV 156 Query: 139 PGCPPTPAATIHGFAVALGLLQQKI--HAVDYRDPTGVT 175 PGCPP P A + G LQ+KI ++ R TG T Sbjct: 157 PGCPPRPEALLQGILK----LQEKIARESLAERYATGAT 191 >UniRef50_B5ZJ00 NADH ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZJ00_GLUDA Length = 166 Score = 93.6 bits (231), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 47/122 (38%), Positives = 71/122 (58%) Query: 32 RSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMP 91 R V+ V+ GGC C +E+ A + GI V++PR A++LL TG +TRAM Sbjct: 23 RPLAVFHVETGGCEGCAMEVAALDGAAYGLPATGIAFVATPRLAEVLLVTGPLTRAMAPV 82 Query: 92 ALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHG 151 A+ + P+ + V+ GAC + GG F + Y+V GG + +D+ +PGCPP+PAA + G Sbjct: 83 LEAAWHAMPEPRALVAVGACAIDGGPFPENYAVLGGLEGRATLDMTVPGCPPSPAAILAG 142 Query: 152 FA 153 A Sbjct: 143 LA 144 >UniRef50_A0B811 F420H2 dehydrogenase subunit B n=6 Tax=Archaea RepID=A0B811_METTP Length = 190 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 48/142 (33%), Positives = 82/142 (57%), Gaps = 8/142 (5%) Query: 24 RHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGA 83 +++L R+++ + + GC E+ +F P +D +RFGI ++PR AD+++ +G Sbjct: 48 KNVLNWGRKNSLWFLMQPMGCCGVEMLVFGC--PHYDCDRFGIIPRATPRQADVMIISGY 105 Query: 84 VTRAMRMPALRA-YESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCP 142 +TR +PA++ +E + K C++ G C + GG F+D Y++ + PIDV++PGCP Sbjct: 106 ITRKY-LPAIKNLWEQMLEPKWCIAVGECAISGGPFYDSYNIIQNTSDFFPIDVYVPGCP 164 Query: 143 PTPAATIHGFAVALGLLQQKIH 164 P P I GF LQ+KI Sbjct: 165 PRPEQFIKGFVE----LQEKIK 182 >UniRef50_B1ZSE7 NADH ubiquinone oxidoreductase 20 kDa subunit n=19 Tax=Bacteria RepID=B1ZSE7_OPITP Length = 285 Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 53/139 (38%), Positives = 77/139 (55%), Gaps = 7/139 (5%) Query: 7 QHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGI 66 + V LDE+ +KM RS + +V GG A E ++ T +D RFGI Sbjct: 134 EEVRLAAALDEKLRKM-------FGRSLRLRQVSAGGSGAEEADLNVLGTIGWDLGRFGI 186 Query: 67 KVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWG 126 + V+SPRHAD L+ TG V++ M + + +E+ P KI ++ GA + GG+F V Sbjct: 187 QFVASPRHADGLVVTGPVSKGMELALRKTWEAMPAPKIVIAVGAEAISGGVFAGHPQVRN 246 Query: 127 GSDTIVPIDVWIPGCPPTP 145 G D IVP+D++IPG PP P Sbjct: 247 GVDAIVPVDLYIPGWPPHP 265 >UniRef50_D2R6Y4 NADH-quinone oxidoreductase, B subunit n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R6Y4_9PLAN Length = 227 Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 55/135 (40%), Positives = 72/135 (53%), Gaps = 8/135 (5%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVV-SSPRHADILLFTGAVTRAMRMPALRAYESAPD 101 G C IE+ AA +D +RFG ++PR AD+++ G VT M R Y PD Sbjct: 57 GLACCAIEMMAAGASRYDMDRFGAGAFRATPRQADLMIVAGTVTYKMASRVRRLYNMMPD 116 Query: 102 HKICVSYGACGVGGG-IFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQ 160 K ++ GAC VGGG F Y V G D +VP+DV+IPGCPP P A + G L +Q Sbjct: 117 PKFVIAMGACTVGGGPYFKWGYHVVKGVDLVVPVDVYIPGCPPRPEALLEG----LMRIQ 172 Query: 161 QKI--HAVDYRDPTG 173 KI H + + TG Sbjct: 173 DKIKGHRIAKKKSTG 187 >UniRef50_A6L170 NADH-quinone oxidoreductase subunit B n=35 Tax=Bacteroidales RepID=NUOB_BACV8 Length = 198 Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 51/141 (36%), Positives = 72/141 (51%), Gaps = 7/141 (4%) Query: 45 NACEIEIFAAITPVFDAERFGIKVV-SSPRHADILLFTGAVTRAMRMPALRAYESAPDHK 103 + C IE A +D RFG +V +SPR AD+++ G +T M R Y+ D K Sbjct: 61 SCCGIEFMAVGAARYDFARFGFEVARASPRQADMIMVAGTITHKMAPVLKRLYDQMADPK 120 Query: 104 ICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKI 163 ++ G C + GG F Y V G D I+P+DV+IPGCPP P A ++G LQ+K+ Sbjct: 121 YVIAVGGCAISGGPFKKSYHVLNGVDKILPVDVYIPGCPPRPEALLYGMI----QLQRKV 176 Query: 164 HAVDYRDPTGVTMQPLWPQIP 184 + GV + PQ P Sbjct: 177 KLEKFFG--GVNRKENEPQNP 195 >UniRef50_Q21TB3 NADH ubiquinone oxidoreductase, 20 kDa subunit n=2 Tax=Proteobacteria RepID=Q21TB3_RHOFD Length = 254 Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 50/139 (35%), Positives = 77/139 (55%), Gaps = 2/139 (1%) Query: 21 KMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLF 80 K+ + L + RS + V GGC+ CE+EI A FD R+GI +V+SPRHAD L+ Sbjct: 115 KVSKALHKRFGRSLKLRSVSAGGCSGCEMEINALSNVNFDLGRYGIDIVASPRHADALVL 174 Query: 81 TGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSV-WGGSDTIVPIDVWIP 139 +G +TR M +++ P+ K+ ++ GAC + GG+F D ++ D P +++P Sbjct: 175 SGPITRNMAQALQICWDAIPEPKLVIAVGACAISGGVFADSDALDRQFLDNFKPA-LYVP 233 Query: 140 GCPPTPAATIHGFAVALGL 158 GCP P I G LG+ Sbjct: 234 GCPAHPLTFISGIMDLLGI 252 >UniRef50_C6X0Z2 NADH-ubiquinone oxidoreductase chain B n=2 Tax=Flavobacteriaceae RepID=C6X0Z2_FLAB3 Length = 185 Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 45/108 (41%), Positives = 64/108 (59%), Gaps = 2/108 (1%) Query: 45 NACEIEIFAAITPVFDAERFGIKVVS-SPRHADILLFTGAVTRAMRMPALRAYESAPDHK 103 + C IE A + P +DA RFG++ S SPR AD+L+ G +++ + + Y + + Sbjct: 48 SCCGIEFMAVLNPTYDASRFGMERNSFSPRQADMLMVCGTISKKLGPVLKQVYTQMAEPR 107 Query: 104 ICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHG 151 V+ GAC GGIF D YSV G D I+P+DV++PGCPP P I G Sbjct: 108 WVVAVGACASSGGIF-DTYSVLQGIDKIIPVDVYVPGCPPRPEQIIEG 154 >UniRef50_A8M069 NADH-quinone oxidoreductase subunit B 1 n=6 Tax=Actinomycetales RepID=NUOB1_SALAI Length = 188 Score = 90.1 bits (222), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 53/136 (38%), Positives = 71/136 (52%), Gaps = 8/136 (5%) Query: 31 RRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFG-IKVVSSPRHADILLFTGAVTRAMR 89 R S +V+ G C IE A D R G I PR AD+++ +G VT M Sbjct: 20 RYSLWVFNF---GLACCAIEFIATSMSRHDFMRLGVIPFAHGPRQADLMVVSGTVTDKMA 76 Query: 90 MPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATI 149 R Y+ P+ K +S+GAC GG + D YSV G D ++P+DV++PGCPP P A + Sbjct: 77 PAIKRLYDQMPEPKYVISFGACSNCGGPYWDSYSVTKGVDQLIPVDVYVPGCPPRPEALL 136 Query: 150 HGFAVALGLLQQKIHA 165 HG LQ+KI A Sbjct: 137 HGIL----RLQEKIAA 148 >UniRef50_Q3ZXS0 NADH-quinone oxidoreductase subunit B n=5 Tax=Dehalococcoides RepID=NUOB_DEHSC Length = 200 Score = 90.1 bits (222), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 43/110 (39%), Positives = 63/110 (57%), Gaps = 1/110 (0%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVV-SSPRHADILLFTGAVTRAMRMPALRAYESAPD 101 G C IE+ +D RFG+ + +SPR AD+++ G +T M R Y+ P+ Sbjct: 75 GLACCAIEMMCMAASRWDLARFGMDIFRASPRQADLMIVAGTLTWKMAPWLKRIYDQMPE 134 Query: 102 HKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHG 151 K ++ GACG GG+F D YSV G + +VP+DV++PGCPP P A + Sbjct: 135 PKWVLAMGACGTSGGLFRDSYSVVPGFNLVVPVDVYVPGCPPRPEALMRA 184 >UniRef50_Q1IZX2 NADH-quinone oxidoreductase subunit B n=16 Tax=cellular organisms RepID=NUOB_DEIGD Length = 178 Score = 89.7 bits (221), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 48/127 (37%), Positives = 73/127 (57%), Gaps = 6/127 (4%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVV-SSPRHADILLFTGAVTRAMRMPALRAYESAPD 101 G C IE+ ++ D RFG +V +SPR AD+++ G +++ M R Y+ PD Sbjct: 42 GLACCAIEMMSSTDGRNDLSRFGSEVFRASPRQADVMIVAGRLSKKMAPIMRRVYDQMPD 101 Query: 102 HKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQ 161 K +S GAC GG+F++ Y+V D +VP+DV++PGCPP P A I+ A+ LQ+ Sbjct: 102 PKWVISMGACASSGGMFNN-YAVVQNVDHVVPVDVFVPGCPPRPEALIY----AVMQLQK 156 Query: 162 KIHAVDY 168 K+ Y Sbjct: 157 KVRGEAY 163 >UniRef50_A8MBS9 NADH-quinone oxidoreductase, B subunit n=5 Tax=Thermoproteaceae RepID=A8MBS9_CALMQ Length = 374 Score = 89.7 bits (221), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 54/155 (34%), Positives = 81/155 (52%), Gaps = 12/155 (7%) Query: 47 CEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICV 106 C +E A P +DAER+G + PR + ++ G VTR M AYE P K + Sbjct: 46 CGVEFAHASAPGYDAERWGFLPIFGPRQTNSIVIEGTVTRKMARIVKTAYEQMPYPKFVI 105 Query: 107 SYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAV 166 + G+C + GG+F + Y V + IVP+D W+ GCPPTP A I A+ ++Q KI Sbjct: 106 AMGSCAMEGGVFWNSYHV-VRVNEIVPVDAWVMGCPPTPEAVIR----AIRMVQSKIEGK 160 Query: 167 DYR-----DPTGVT--MQPLWPQIPPSQRIAIERE 194 + + +P ++ ++P PQ PP+ IE E Sbjct: 161 EVKPNIRPNPVDLSKVLKPDKPQRPPNPPHRIEFE 195 >UniRef50_A0LSU0 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LSU0_ACIC1 Length = 269 Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 55/146 (37%), Positives = 76/146 (52%), Gaps = 18/146 (12%) Query: 33 SAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPA 92 S +V VD G A E E+ A + PV+D R GI +SPRHAD+LL TG +R M P Sbjct: 124 SIHVRHVDAGSDGADEWEVLALLNPVYDIHRLGIFFTASPRHADVLLVTGVGSRGMAAPL 183 Query: 93 LRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGG-SDTI-----------------VPI 134 R ++AP + ++ G + GG+ H Y+ GG D I V + Sbjct: 184 ARTLQAAPRPLVVIAAGTDAISGGLVHPTYATSGGIGDLIAATPDSAGATGAADGDPVRV 243 Query: 135 DVWIPGCPPTPAATIHGFAVALGLLQ 160 D+W+PG PPTP A +H +A+G LQ Sbjct: 244 DIWVPGSPPTPFALLHALLLAMGRLQ 269 >UniRef50_A9G9S9 NADH-quinone oxidoreductase subunit B 2 n=2 Tax=Myxococcales RepID=NUOB2_SORC5 Length = 182 Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 69/134 (51%), Gaps = 7/134 (5%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDH 102 G C IE+ P D ERFG SPR +D+ + G +T M R Y+ + Sbjct: 52 GLACCAIELMQTGGPRGDLERFGAAPRPSPRSSDLFIIAGTLTYKMATRVKRLYDQMSEP 111 Query: 103 KICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQK 162 + +S G+C GG+F YSV G D I+P+DV++PGCPP P A + G L +Q+K Sbjct: 112 RFVISMGSCSNCGGLFQYAYSVCKGVDQIIPVDVYVPGCPPRPEALLEG----LLKIQEK 167 Query: 163 IH---AVDYRDPTG 173 I A+ R TG Sbjct: 168 IKSERALGRRGATG 181 >UniRef50_A1RZ48 NADH-quinone oxidoreductase, B subunit n=3 Tax=Thermoprotei RepID=A1RZ48_THEPD Length = 171 Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 45/126 (35%), Positives = 72/126 (57%), Gaps = 5/126 (3%) Query: 45 NACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKI 104 + C E A P FDAERFG +SPR ++++ G +T+ M A Y+ P K Sbjct: 50 SCCGAEFAATSAPRFDAERFGFLPFNSPRQTNLMVIEGTLTKKMGEAAKIVYDQMPWPKF 109 Query: 105 CVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIH 164 ++ GAC + GG+F++ Y++ D I+P++ +IPGCPP P A A A+ +LQ+K+ Sbjct: 110 VIAMGACAIDGGLFYNSYNIVRPKD-ILPVEYFIPGCPPRPEAV----AQAIIMLQEKVR 164 Query: 165 AVDYRD 170 ++R Sbjct: 165 KGEWRK 170 >UniRef50_A2BJ94 NAD(P)H-quinone oxidoreductase chain K n=10 Tax=Thermoprotei RepID=A2BJ94_HYPBU Length = 209 Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 5/125 (4%) Query: 45 NACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKI 104 + C E A P +D+ER G + PR+ ++LL G +TR M A +E P K Sbjct: 53 SCCGAEFAAVYDPKYDSERLGSLPFTHPRNTNVLLVEGTLTRKMARAARLVWEQMPWPKF 112 Query: 105 CVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIH 164 ++ GAC + GGIF++ Y++ + I+P+D ++PGCPPTP A A AL LQ+K+ Sbjct: 113 VIAMGACAITGGIFYNSYNI-VRVNQILPVDYYVPGCPPTPEAV----ANALIKLQEKVR 167 Query: 165 AVDYR 169 +++ Sbjct: 168 KGEWK 172 >UniRef50_A4YGN5 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Metallosphaera sedula DSM 5348 RepID=A4YGN5_METS5 Length = 203 Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 45/128 (35%), Positives = 66/128 (51%), Gaps = 8/128 (6%) Query: 30 IRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMR 89 +RS Y+Y +D G C C +E+ +P +D RFGI ++P+HAD LL G + + M Sbjct: 80 FKRSFYLYPLDAGSCGGCNLELRLISSPQYDMTRFGIFFTNTPKHADALLIMGNLGKRME 139 Query: 90 MPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATI 149 RAY+ P K+ + G C + GG+ + G DV +PGCPPTPA+ + Sbjct: 140 EVIRRAYDVIPSPKLVILLGTCAISGGVTGIPPDIRG--------DVIVPGCPPTPASIL 191 Query: 150 HGFAVALG 157 A G Sbjct: 192 DALIKAKG 199 >UniRef50_Q1IPE7 NADH-quinone oxidoreductase subunit B 1 n=10 Tax=Bacteria RepID=NUOB1_ACIBL Length = 213 Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 49/141 (34%), Positives = 79/141 (56%), Gaps = 8/141 (5%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVVS-SPRHADILLFTGAVTRAMRMPALR-AYESAP 100 G C IE+ + FD RFG +V SPR +D+++ G V++ M P +R Y P Sbjct: 79 GLACCAIEMMSMGASRFDIARFGAEVFRPSPRQSDLMIIAGRVSQKM-APVIRHLYLQMP 137 Query: 101 DHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQ 160 + K +S GAC GG+F++ Y++ G + +P+D+++PGCPP P I+ A+ LLQ Sbjct: 138 EPKWVISMGACATSGGVFNN-YALVQGVNQYIPVDIYVPGCPPRPEQLIY----AITLLQ 192 Query: 161 QKIHAVDYRDPTGVTMQPLWP 181 +KI A + ++P+ P Sbjct: 193 EKIQAERGSFRRALNLEPVTP 213 >UniRef50_B4U8H3 NADH-quinone oxidoreductase subunit B n=4 Tax=Bacteria RepID=NUOB_HYDS0 Length = 177 Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 51/123 (41%), Positives = 68/123 (55%), Gaps = 7/123 (5%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALR-AYESAPD 101 G C IE+ A FD +R G+ +SPR AD+L+ G V + P L+ ++ P+ Sbjct: 33 GLACCAIEMMHAAASRFDIDRLGMIFRASPRQADVLIVAGTVVNKV-APMLKLVWDQMPE 91 Query: 102 HKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQ 161 K C+S G C GG F YS G D I+P+DV+IPGCPPTP I+G L LQ+ Sbjct: 92 PKWCISMGGCASAGGPFPT-YSTLQGIDRIIPVDVYIPGCPPTPQGLIYG----LLELQR 146 Query: 162 KIH 164 KI Sbjct: 147 KIR 149 >UniRef50_Q492H7 NADH-quinone oxidoreductase subunit B n=225 Tax=Bacteria RepID=NUOB_BLOPB Length = 236 Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 48/123 (39%), Positives = 70/123 (56%), Gaps = 6/123 (4%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVV-SSPRHADILLFTGAVTRAMRMPALRAYESAPD 101 G + C +E+ A T + D RFG +V+ +SPR AD ++ G M R Y+ + Sbjct: 65 GLSCCYVEMTTAFTAIHDVARFGSEVLRASPRQADFMVIAGTPFLKMVPVIQRLYDQMLE 124 Query: 102 HKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQ 161 K +S GAC GG++ D+YSV G D +P+D++IPGCPP P A I G L LL++ Sbjct: 125 PKWVISMGACANSGGMY-DIYSVVQGVDKFLPVDLYIPGCPPRPEAYIQG----LLLLKK 179 Query: 162 KIH 164 I+ Sbjct: 180 SIN 182 >UniRef50_A9GUX6 NADH-quinone oxidoreductase subunit B 1 n=10 Tax=Bacteria RepID=NUOB1_SORC5 Length = 194 Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 61/158 (38%), Positives = 85/158 (53%), Gaps = 18/158 (11%) Query: 47 CEIEIFAAITPVFDAERFGIKVVS-SPRHADILLFTGAVTRAMRMPAL-RAYESAPDHKI 104 C +E A +P FD RFG +V SPR AD+L G +++ + PAL R YE D K Sbjct: 48 CGMEYMAMASPRFDMARFGAEVPRFSPRQADLLWVVGTISQ-RQAPALKRIYEQMADPKW 106 Query: 105 CVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIH 164 +++G C GG F+D Y+ G D ++P DV++PGCPP P A + G L LLQ KI Sbjct: 107 VLAFGTCASCGG-FYDNYTTVAGIDKVIPCDVYVPGCPPRPEAVLDG----LMLLQDKIA 161 Query: 165 AVDYRDPTGVTMQPLWPQIPPSQR----IAIEREARRL 198 D R P V P+ P+Q + ++R+ R L Sbjct: 162 RGD-RTPAIVK-----PREDPAQTTEHLVTLQRKERSL 193 >UniRef50_C7PSH0 NADH-quinone oxidoreductase, B subunit n=4 Tax=Sphingobacteriales RepID=C7PSH0_CHIPD Length = 187 Score = 87.4 bits (215), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 46/120 (38%), Positives = 68/120 (56%), Gaps = 4/120 (3%) Query: 45 NACEIEIFAAITPVFDAERFGI-KVVSSPRHADILLFTGAVTRAMRMPALR-AYESAPDH 102 + C IE A + +D RFG ++ +PR D+L+ G +++ M P LR Y + Sbjct: 50 SCCGIEFMATMASTYDMSRFGSERMAFTPRQCDLLMVMGTISKKM-APVLRQVYLQMAEP 108 Query: 103 KICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQK 162 + V+ GAC GG+F D YSV G D ++P+DV++PGCPP P A I GF L+ Q+ Sbjct: 109 RWVVAVGACASSGGVF-DTYSVLQGIDQVIPVDVYVPGCPPRPEAIIDGFMRVQDLVGQE 167 >UniRef50_C1ZCK3 NADH dehydrogenase subunit B n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZCK3_PLALI Length = 225 Score = 87.4 bits (215), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 49/125 (39%), Positives = 67/125 (53%), Gaps = 6/125 (4%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVV-SSPRHADILLFTGAVTRAMRMPALRAYESAPD 101 G C +E+ A +D +RFG ++PR AD+++ G VT M R Y+ PD Sbjct: 59 GIACCAMEMMATGMSKYDLDRFGSGAFRATPRQADLMIVAGTVTYKMASRIRRLYDQMPD 118 Query: 102 HKICVSYGACGVGGG-IFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQ 160 K ++ GAC +GGG F Y V G D +VP+DV+IPGCPP P A + G +Q Sbjct: 119 PKYVIAMGACTIGGGPYFKYGYHVVKGVDLVVPVDVYIPGCPPRPEALLEGVM----RIQ 174 Query: 161 QKIHA 165 KI A Sbjct: 175 DKIRA 179 >UniRef50_D2PJN5 NADH ubiquinone oxidoreductase, 20 kDa subunit n=9 Tax=Sulfolobus RepID=D2PJN5_SULIS Length = 201 Score = 86.3 bits (212), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 44/130 (33%), Positives = 66/130 (50%), Gaps = 12/130 (9%) Query: 30 IRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMR 89 +RS Y+Y +D G C C +E+ +P +D RF I ++PRHAD L+ G +T M+ Sbjct: 81 FKRSFYLYPIDSGTCGGCNMELKLISSPEYDMTRFSIFFTNTPRHADALVVMGVMTEKMK 140 Query: 90 MPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPID--VWIPGCPPTPAA 147 +AYE+ P+ K+ + GAC + GGI + VP++ V I GCPP P Sbjct: 141 EVLKKAYEAMPEPKVVILLGACAISGGIIGEG----------VPLEAVVEISGCPPNPFT 190 Query: 148 TIHGFAVALG 157 + G Sbjct: 191 ILEALMKVKG 200 >UniRef50_C1VB41 NADH dehydrogenase subunit B n=1 Tax=Halogeometricum borinquense DSM 11551 RepID=C1VB41_9EURY Length = 236 Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 44/122 (36%), Positives = 66/122 (54%), Gaps = 5/122 (4%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVV-SSPRHADILLFTGAVTRAMRMPALRAYESAPD 101 G C IE+ + D +RF V +SPR AD+++ G + R Y+ P+ Sbjct: 70 GIACCSIEMMHTYSVKHDLDRFAAGVPRASPRQADVIIVPGTIVSKFAPRMKRVYDQMPE 129 Query: 102 HKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQ 161 K V G+C V GG F + Y+V G++ ++P+D+ +PGCPP P A I+G A LQQ Sbjct: 130 PKFVVGMGSCTVSGGPFQEGYNVIKGAEEVIPVDIHVPGCPPRPEALIYGVA----KLQQ 185 Query: 162 KI 163 +I Sbjct: 186 RI 187 >UniRef50_A9BJL8 NADH ubiquinone oxidoreductase 20 kDa subunit n=8 Tax=cellular organisms RepID=A9BJL8_PETMO Length = 195 Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 40/121 (33%), Positives = 67/121 (55%), Gaps = 2/121 (1%) Query: 41 CGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAP 100 C GC A +E+ +T FD ER G+ +++PR AD+LL TG ++ + YE Sbjct: 42 CTGCGA--VELPPTMTARFDMERLGMGPMATPRQADVLLITGYLSVKTLRRVIYTYEQMM 99 Query: 101 DHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQ 160 K V +G+C + GGI++D Y+V D +P+D+++ GC P P A ++ F ++ Sbjct: 100 TPKYLVGFGSCTINGGIYYDSYAVINRLDYYLPVDLYVAGCMPRPEAIMNTFKTLENMIT 159 Query: 161 Q 161 + Sbjct: 160 K 160 >UniRef50_B3TC56 Putative NADH ubiquinone oxidoreductase, 20 Kd subunit n=1 Tax=uncultured marine microorganism HF4000_APKG10H11 RepID=B3TC56_9ZZZZ Length = 182 Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 47/133 (35%), Positives = 70/133 (52%), Gaps = 7/133 (5%) Query: 31 RRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRM 90 + S +V + G C+ E A +D ERFG V+++ R DIL+ G V M Sbjct: 43 KNSLWVVHLTTGCCSP---EFAALAGAGYDMERFGPLVMAAMRQCDILIIEGQVADKMAE 99 Query: 91 PALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIH 150 R Y+ PD K ++ G C + GG + D YS+ G D I+P+DV++PGCPP P I Sbjct: 100 VVKRTYDQMPDPKYVIAVGNCAISGGFYWDSYSMVMGIDKIIPVDVYVPGCPPRPEDWID 159 Query: 151 GFAVALGLLQQKI 163 A+ L+Q ++ Sbjct: 160 ----AIRLVQTRM 168 >UniRef50_A3THJ2 NADH dehydrogenase beta subunit n=2 Tax=Bacteria RepID=A3THJ2_9MICO Length = 198 Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 40/111 (36%), Positives = 65/111 (58%), Gaps = 2/111 (1%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVVS-SPRHADILLFTGAVTRAMRMPALRAYESAPD 101 G C IE+ A TP +D RFG++ S +PR AD+++ G V+ M + Y+ P+ Sbjct: 34 GLACCAIEMMAVGTPDYDIARFGMERFSATPRQADLMIVAGRVSNKMAPVVRQVYDQMPN 93 Query: 102 HKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGF 152 K +S G C GG+F++ Y++ G D I+P+D+++PGCPP P ++ Sbjct: 94 PKWVISMGVCASSGGMFNN-YAIVQGVDHIIPVDIYLPGCPPRPEMLLNAI 143 >UniRef50_Q26783 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial n=7 Tax=Trypanosomatidae RepID=NDUS7_TRYBB Length = 202 Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 46/122 (37%), Positives = 67/122 (54%), Gaps = 6/122 (4%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRA-YESAPD 101 G C +E+ A +D +RFGI +PR A+I++ +G VT M P LR Y + Sbjct: 74 GLACCAVEMMHAYASRYDLDRFGIVPRPTPRQAEIIIVSGTVTNKM-APILRNIYVQMVN 132 Query: 102 HKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQ 161 K +S G+C GGG +H Y+V G + +P+D WIPGCPP+ + + L LQ+ Sbjct: 133 PKWVISMGSCANGGGYYHFSYAVLRGCERAIPVDFWIPGCPPSAESLV----FCLHTLQK 188 Query: 162 KI 163 KI Sbjct: 189 KI 190 >UniRef50_Q1IL91 NADH-quinone oxidoreductase subunit B 2 n=4 Tax=Bacteria RepID=NUOB2_ACIBL Length = 202 Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 53/136 (38%), Positives = 71/136 (52%), Gaps = 7/136 (5%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVV-SSPRHADILLFTGAVTRAMRMPALRAYESAPD 101 G C IE+ A T +D RFG +V SPR +D+++ G VT M R YE P+ Sbjct: 35 GLACCAIEMITASTARYDIARFGSEVFRPSPRQSDLMIVAGTVTLKMAPVVQRIYEQMPE 94 Query: 102 HKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQ 161 K ++ GAC GG F+ Y+ G D IVP+DV++ GCPP P +G L LQ Sbjct: 95 PKWVMAMGACASVGGPFNT-YATLQGVDKIVPVDVYVVGCPPRPENLFYG----LLKLQD 149 Query: 162 KI-HAVDYRDPTGVTM 176 KI H + PT V + Sbjct: 150 KIDHMTLAKRPTDVRL 165 >UniRef50_B0SFT5 NADH-quinone oxidoreductase subunit B n=13 Tax=cellular organisms RepID=NUOB_LEPBA Length = 186 Score = 84.0 bits (206), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 50/121 (41%), Positives = 68/121 (56%), Gaps = 8/121 (6%) Query: 47 CEIEIFAAITPVFDAERFGIKVVS-SPRHADILLFTGAVTRAMRMPALRA-YESAPDHKI 104 C IE + +D RFG + S SPR AD++L G +T M P LR Y+ + K Sbjct: 45 CGIEYMSTACADYDIARFGAERPSFSPRQADMILVLGTITYKM-APVLRQIYDQLAEPKF 103 Query: 105 CVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIH 164 +S GAC GG+FH Y V G D I+P+DV++PGCPP P A + AL LQ+K+ Sbjct: 104 VISVGACASSGGMFHT-YGVLQGVDRILPVDVYVPGCPPRPEAILD----ALVKLQKKVQ 158 Query: 165 A 165 + Sbjct: 159 S 159 >UniRef50_B1KJU9 NADH-quinone oxidoreductase subunit B n=8 Tax=Proteobacteria RepID=NUOB_SHEWM Length = 213 Score = 83.2 bits (204), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 44/123 (35%), Positives = 71/123 (57%), Gaps = 6/123 (4%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVV-SSPRHADILLFTGAVTRAMRMPALRAYESAPD 101 G + C +E+ + T D RFG +V+ ++PR AD+++ +G V M Y+ + Sbjct: 49 GLSCCYVEMATSFTSRHDIARFGSEVIRATPREADLIVISGTVFLKMAPVIKHLYDQMLE 108 Query: 102 HKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQ 161 K + G+C GG++ D+YSV G+D +PID+++PGCPP P A ++G L LLQ+ Sbjct: 109 PKWVICMGSCANSGGMY-DVYSVVQGADRFLPIDLYVPGCPPRPEALMYG----LTLLQE 163 Query: 162 KIH 164 I Sbjct: 164 AIK 166 >UniRef50_C5A4Q2 Membrane bound oxidoreductase, MbxJ subunit (MbxJ) n=11 Tax=cellular organisms RepID=C5A4Q2_THEGJ Length = 194 Score = 83.2 bits (204), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 49/139 (35%), Positives = 70/139 (50%), Gaps = 2/139 (1%) Query: 13 ITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSP 72 I+ + Q K+ L + R+ + C GC E+ A T +D ERFGI +P Sbjct: 8 ISYELQEFKLFEPLFRWARKKSLWIVAFCTGCGGIEMPPLA--TARYDFERFGIMPNPAP 65 Query: 73 RHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIV 132 R AD+ L TG VT + YE D K +++G+C + GG++ D Y+V D + Sbjct: 66 RMADLFLITGYVTPKTLKRIIITYEMMQDPKYVLAHGSCPINGGVYWDSYNVVKQLDKYI 125 Query: 133 PIDVWIPGCPPTPAATIHG 151 PIDV I GC P P A + G Sbjct: 126 PIDVAIAGCMPRPEAVMDG 144 >UniRef50_UPI00016C3AA7 NADH-quinone oxidoreductase, B subunit n=2 Tax=Bacteria RepID=UPI00016C3AA7 Length = 201 Score = 83.2 bits (204), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 48/128 (37%), Positives = 69/128 (53%), Gaps = 9/128 (7%) Query: 47 CEIEIFAAITPVFDAERFGIKVVS-SPRHADILLFTGAVTRAMRMPALRAYESAPDHKIC 105 C IE+ A + +D RFG + + SPR D+++ G V M R + P+ K C Sbjct: 37 CGIELMATASSRYDIARFGSEAMRFSPRQCDVMIVAGRVAMKMVPVMQRIWLQMPEPKWC 96 Query: 106 VSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIH- 164 +S GAC GG+F D Y+V G D +P+DV++PGCPP P I A+ LQ+KI Sbjct: 97 ISMGACASSGGVF-DTYAVVQGIDRFIPVDVYVPGCPPRPEQLIR----AVLDLQEKIQK 151 Query: 165 --AVDYRD 170 +D R+ Sbjct: 152 TGTIDARE 159 >UniRef50_B1L7S0 F420H2 dehydrogenase subunit n=3 Tax=Archaea RepID=B1L7S0_KORCO Length = 174 Score = 82.8 bits (203), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 47/127 (37%), Positives = 68/127 (53%), Gaps = 8/127 (6%) Query: 47 CEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICV 106 C E A+ P +DAER G R ++L G +++ M A+ YE P+ K + Sbjct: 53 CGAEFAASAAPKYDAERLGFLPFIGIRQCNVLFIEGTLSKKMAEAAIWVYEQMPEPKFVI 112 Query: 107 SYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKI--- 163 GAC + GGIF + Y++ D I+P++V+IPGCPP P A A A+ +LQ+KI Sbjct: 113 GMGACAIDGGIFWNSYNIVRPMD-ILPVNVFIPGCPPRPEAV----AQAIIMLQRKIRKG 167 Query: 164 HAVDYRD 170 V Y D Sbjct: 168 ELVKYED 174 >UniRef50_B0R3U2 NADH dehydrogenase-like complex subunit B n=11 Tax=Halobacteriaceae RepID=B0R3U2_HALS3 Length = 235 Score = 82.8 bits (203), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 5/122 (4%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVV-SSPRHADILLFTGAVTRAMRMPALRAYESAPD 101 G C IE+ + D +RF V +SPR AD+++ G + R Y+ P+ Sbjct: 69 GIACCSIEMMHTYSVKHDLDRFHAGVPRASPRQADVMIVPGTIVSKFAPRMKRVYDQMPE 128 Query: 102 HKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQ 161 K V+ G C GG F + Y+V G++ ++P+D+ IPGCPP P A ++G A LQ+ Sbjct: 129 PKFVVNMGNCSTSGGPFQEGYNVVKGAEEVIPVDIHIPGCPPRPEALVYGVA----KLQE 184 Query: 162 KI 163 +I Sbjct: 185 RI 186 >UniRef50_Q2S5J2 NADH-quinone oxidoreductase subunit B n=4 Tax=Bacteria RepID=NUOB_SALRD Length = 213 Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 45/122 (36%), Positives = 66/122 (54%), Gaps = 6/122 (4%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVVS-SPRHADILLFTGAVTRAMRMPALRAYESAPD 101 G C IE+ P +D+ RFG + + SPR AD+++ G + M R ++ D Sbjct: 35 GLACCAIEMMGFAGPKYDSARFGSEAMRFSPRQADLMIVAGWCSYKMSHAIRRVWDQMGD 94 Query: 102 HKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQ 161 K C++ GAC GG+ H Y V G D +P+DV+I GCPP P + +H AL +Q+ Sbjct: 95 PKWCIAMGACASTGGM-HRCYGVVQGVDNFLPVDVYISGCPPRPESVLH----ALMDIQE 149 Query: 162 KI 163 KI Sbjct: 150 KI 151 >UniRef50_A5FW77 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FW77_ACICJ Length = 164 Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 44/121 (36%), Positives = 59/121 (48%) Query: 32 RSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMP 91 RS V VD G C CEIEI A GI +V R ADILL TG TR + Sbjct: 24 RSLAVRHVDAGSCGGCEIEIAACRRLRGGMAAHGIAMVEDLRAADILLVTGVATRNLAEA 83 Query: 92 ALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHG 151 ++ + V+ G C + GG+F + +V GG ++P+D+ I GCPP P + G Sbjct: 84 VRKSLAGMAPPRFVVAAGDCALDGGVFKGVPAVLGGVQAVIPVDLLIAGCPPAPRQILAG 143 Query: 152 F 152 Sbjct: 144 L 144 >UniRef50_Q1D8S3 NADH-quinone oxidoreductase subunit B n=2 Tax=Cystobacterineae RepID=NUOB_MYXXD Length = 187 Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 46/142 (32%), Positives = 67/142 (47%), Gaps = 7/142 (4%) Query: 35 YVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVS-SPRHADILLFTGAVTRAMRMPAL 93 Y Y C C +E + D RFG + SPR AD+L+ G + Sbjct: 40 YPYATAC-----CGMEYMSVAASRHDISRFGAEFPRFSPRQADLLMVVGTINLKQAPILK 94 Query: 94 RAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFA 153 R YE + K V++G C GG F+D Y+V G D I+P+DV+IPGCPP P + G Sbjct: 95 RVYEQMAEPKWVVAFGVCASSGG-FYDNYAVLQGIDRIIPVDVYIPGCPPRPEQVLDGLM 153 Query: 154 VALGLLQQKIHAVDYRDPTGVT 175 + + ++H + R+ T Sbjct: 154 LLQDKIGNQVHRIAEREEANPT 175 >UniRef50_B1ZUJ0 NADH-quinone oxidoreductase subunit B 2 n=13 Tax=Bacteria RepID=NUOB2_OPITP Length = 191 Score = 80.9 bits (198), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 43/112 (38%), Positives = 59/112 (52%), Gaps = 3/112 (2%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVV-SSPRHADILLFTGAVTRAMRMPALRAYESAPD 101 G C IE+ AA FD RFG +V SPR AD+++ G V + M Y+ + Sbjct: 59 GLACCAIEMMAAGMARFDISRFGAEVFRPSPRQADVMIVAGTVNKKMAPAVKLLYDQMLE 118 Query: 102 HKICVSYGACGVGGGIFH--DLYSVWGGSDTIVPIDVWIPGCPPTPAATIHG 151 K ++ G C + GG F Y+V G D + P+DV++PGCPP P A I G Sbjct: 119 PKWVIAMGQCAISGGPFKYPGQYAVVEGVDQLFPVDVYVPGCPPRPEALIEG 170 >UniRef50_C0QR84 NADH-quinone oxidoreductase chain b (Nadh dehydrogenasei, chain b) (Ndh-1, chain b) n=1 Tax=Persephonella marina EX-H1 RepID=C0QR84_PERMH Length = 181 Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 41/110 (37%), Positives = 56/110 (50%), Gaps = 1/110 (0%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDH 102 G C IE+ FD +R GI SPR +D+L+ G V + Y+ PD Sbjct: 32 GLACCAIEMMHTAASRFDTDRLGIIFRGSPRQSDVLIVAGTVVNKVAPMLKLIYDQMPDP 91 Query: 103 KICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGF 152 K ++ G C GG F Y+ G D I+P+DV++PGCPPTP A + G Sbjct: 92 KWVIAMGGCSSAGGPFPT-YATLQGVDRIIPVDVYVPGCPPTPQALLWGI 140 >UniRef50_B6YR59 NADH-quinone oxidoreductase subunit B n=5 Tax=Bacteroidales RepID=NUOB_AZOPC Length = 191 Score = 80.5 bits (197), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 1/108 (0%) Query: 45 NACEIEIFAAITPVFDAERFGIKVV-SSPRHADILLFTGAVTRAMRMPALRAYESAPDHK 103 + C IE +D RFG +V +SPR AD++ G + M R Y+ + K Sbjct: 51 SCCGIEFMCLGAARYDFARFGWEVTRNSPRQADVVFCCGTIVHKMAPVLKRLYDQMSEPK 110 Query: 104 ICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHG 151 ++ G+C + GG F Y G D I+P+DV+IPGCPP P A I+G Sbjct: 111 YVIALGSCAISGGPFKSSYHTIMGIDKIIPVDVYIPGCPPRPDAMIYG 158 >UniRef50_Q0RRW7 NADH-quinone oxidoreductase subunit B n=5 Tax=Bacteria RepID=NUOB_FRAAA Length = 281 Score = 79.7 bits (195), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 42/105 (40%), Positives = 65/105 (61%), Gaps = 4/105 (3%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVV-SSPRHADILLFTGAVTRAMRMPALRA-YESAP 100 G C IE+ + +D RFG++V +SPR AD+++ G V++ M P LR Y+ P Sbjct: 34 GLACCAIEMMSTGAGRYDLSRFGMEVFRASPRQADLMIVAGRVSQKM-APVLRQIYDQMP 92 Query: 101 DHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTP 145 + K +S G C GG+F++ Y++ G D IVP+D+++PGCPP P Sbjct: 93 EPKWVLSMGVCASSGGMFNN-YAIVQGVDHIVPVDMYLPGCPPRP 136 >UniRef50_A3DM92 NADH-quinone oxidoreductase, B subunit n=1 Tax=Staphylothermus marinus F1 RepID=A3DM92_STAMF Length = 179 Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 40/110 (36%), Positives = 57/110 (51%), Gaps = 1/110 (0%) Query: 44 CNAC-EIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDH 102 C+AC IE+ + DAER+GI SPR AD+L+ G VT+ +R Y P+ Sbjct: 26 CSACGAIELPPNMMAPLDAERWGIMPAPSPRQADVLVIMGYVTKKTLKVLMRLYHQMPEP 85 Query: 103 KICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGF 152 + + C GG++ D YS D +P+DVW+PGC P + GF Sbjct: 86 RYVMVGCNCPATGGLYWDSYSTVKAVDEFLPVDVWVPGCMPRAEDWLQGF 135 >UniRef50_Q5FU78 Putative uncharacterized protein n=1 Tax=Gluconobacter oxydans RepID=Q5FU78_GLUOX Length = 161 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 42/110 (38%), Positives = 58/110 (52%) Query: 36 VYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRA 95 +Y ++ GGC C +EI + F E+ G VS P AD LL TGAVTR R Sbjct: 39 LYVLEAGGCEGCFMEIESLNGSAFALEQAGFVCVSDPADADWLLLTGAVTRVCAEMVDRV 98 Query: 96 YESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTP 145 + + P + ++ GAC V GG F Y+ GG + + P+ I GCPP+P Sbjct: 99 WRAMPPGRSLIAVGACAVDGGPFPAGYATLGGLEALTPVRRSIAGCPPSP 148 >UniRef50_B0SCU6 Metal (Ni/Fe) hydrogenase, small subunit n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SCU6_LEPBA Length = 273 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 51/165 (30%), Positives = 84/165 (50%), Gaps = 16/165 (9%) Query: 5 LTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYR-VDCGGCNACEIEIFAAITPVFDAER 63 + ++ TL E Q+ R L ++ ++YR V GG N E E+ A+ VFD+ER Sbjct: 113 MEKNSQSNFTLSE-NQRQFRDL---TKKRGFLYREVAAGGNNTVESELNASFNSVFDSER 168 Query: 64 FGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYS 123 GI+ V+SP+HAD ++F+G ++ M P A++ + + ++ G V GG+F Sbjct: 169 EGIRCVASPKHADTIVFSGPISEQMEGPLQTAWDVLSEPRALIACGTEAVSGGLFPK--- 225 Query: 124 VWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALG----LLQQKIH 164 G P D++I G PP P + GF + +G Q+ +H Sbjct: 226 ---GKIPKEP-DLYISGDPPRPDVILQGFRLLIGRFSFQFQEALH 266 >UniRef50_C7DI98 NADH-quinone oxidoreductase, B subunit n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI98_9EURY Length = 206 Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 5/122 (4%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVV-SSPRHADILLFTGAVTRAMRMPALRAYESAPD 101 G C IE+ DAER G + +PR D+++ G VT++M R YE Sbjct: 65 GLACCAIELMDFGAARIDAERKGYLLFRGTPRQCDVMIVAGWVTKSMVPRVKRLYEQMAS 124 Query: 102 HKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQ 161 K V+YG C GG +++ Y++ G D ++P+DV+ GCPP P AL LQ+ Sbjct: 125 PKYVVAYGECATAGGPWYESYNIVKGIDQVLPVDVYAIGCPPKP----ENLFAALMKLQE 180 Query: 162 KI 163 K+ Sbjct: 181 KV 182 >UniRef50_A0L9R6 Membrane bound protein complex subunit mbxJ n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9R6_MAGSM Length = 213 Score = 77.0 bits (188), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 39/136 (28%), Positives = 74/136 (54%), Gaps = 3/136 (2%) Query: 27 LQDIRRSAYVYRVDCG-GCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVT 85 L + RS ++ + G GC A IE+ +TP FDA R+G++ ++PR +++ + +G ++ Sbjct: 46 LFNWARSNSIWVLGFGTGCGA--IEMRPLMTPRFDAYRYGVQWRATPRQSNLFIVSGYLS 103 Query: 86 RAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTP 145 +RAYE K + G+C + GG++ D Y+ D +P+D+++ GC P P Sbjct: 104 VKTLKRVVRAYEQMQSPKYVMGLGSCTINGGMYWDSYNTIKQLDDYLPVDLYVTGCMPRP 163 Query: 146 AATIHGFAVALGLLQQ 161 A + G ++++ Sbjct: 164 EALLSGIEALKKIIRE 179 >UniRef50_Q6L0U2 Formate hydrogenlyase subunit 7 n=1 Tax=Picrophilus torridus RepID=Q6L0U2_PICTO Length = 202 Score = 76.6 bits (187), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 39/125 (31%), Positives = 60/125 (48%), Gaps = 8/125 (6%) Query: 28 QDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRA 87 + R+S +Y +D G C AC E+F+ P +D R+ I ++PRHAD ++ +G + Sbjct: 81 KKFRKSLNIYSIDSGTCGACNSELFSISIPEYDLTRYHIFFTNTPRHADAIILSGIYNES 140 Query: 88 MRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAA 147 M+ A + P + GAC + GGI GS + + IPGCPP P Sbjct: 141 MKDVIDNALGAMPKPGYLILLGACALSGGII--------GSGHEIKAVLEIPGCPPNPYT 192 Query: 148 TIHGF 152 + G Sbjct: 193 ILKGL 197 >UniRef50_D2R5G9 NADH-quinone oxidoreductase, B subunit n=2 Tax=Planctomycetaceae RepID=D2R5G9_9PLAN Length = 192 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 41/101 (40%), Positives = 58/101 (57%), Gaps = 4/101 (3%) Query: 47 CEIEIFAAITPVFDAERFGIKVVS-SPRHADILLFTGAVTRAMRMPAL-RAYESAPDHKI 104 C IE+ A D RFG +V SPR D+++ G V M +P L R ++ + K Sbjct: 36 CGIELMATGASRHDLARFGAEVFRFSPRQCDLMIVAGRVVMKM-LPVLQRIWQQMHEPKW 94 Query: 105 CVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTP 145 C+S GAC GG+F D Y+V G D +P+D+++PGCPP P Sbjct: 95 CISMGACASTGGVF-DTYAVVQGIDRFIPVDMYVPGCPPRP 134 >UniRef50_B5ICA0 NADH ubiquinone oxidoreductase, 20 Kd subunit family n=2 Tax=Aciduliprofundum boonei T469 RepID=B5ICA0_9EURY Length = 179 Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 68/143 (47%), Gaps = 14/143 (9%) Query: 16 DEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHA 75 +E+ K++ +S +++ +D G C++C EI +P +D R G PRHA Sbjct: 46 EERDDKIEVRRKIPFNKSVHIFVLDVGSCSSCNREISLLNSPQYDLHRLGFFFTPVPRHA 105 Query: 76 DILLFTGAVTRAMRMPALR-AYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPI 134 DILL G T M +P L+ AYE P+ KI ++ GAC + I+ + Sbjct: 106 DILLVIGEPTEKM-IPVLKEAYEQMPEPKIVMTAGACAN------------EKIEKIIKV 152 Query: 135 DVWIPGCPPTPAATIHGFAVALG 157 D + GCPP P A + + G Sbjct: 153 DARVSGCPPQPIAILKALLMLTG 175 >UniRef50_B1ZRT2 NADH-quinone oxidoreductase subunit B 1 n=4 Tax=Bacteria RepID=NUOB1_OPITP Length = 171 Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 46/123 (37%), Positives = 62/123 (50%), Gaps = 6/123 (4%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVVS-SPRHADILLFTGAVTRAMRMPALRAYESAPD 101 G C IE+ FD RFG +V+ SPR +D ++ G+VT M R Y+ Sbjct: 41 GLACCAIELMQVGNGRFDIARFGAEVMRFSPRQSDCMIVAGSVTYKMAPQIRRIYDQMMS 100 Query: 102 HKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQ 161 K ++ GAC GG++ Y+ G D I+P+DV+I GCPP P G AL LQ Sbjct: 101 PKWVIAMGACASSGGMYRS-YAHMQGVDRILPVDVYISGCPPRP----EGILDALMKLQA 155 Query: 162 KIH 164 KI Sbjct: 156 KIR 158 >UniRef50_Q04P25 Metal (Ni/Fe) hydrogenase, small subunit n=4 Tax=Leptospira RepID=Q04P25_LEPBJ Length = 273 Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 48/141 (34%), Positives = 75/141 (53%), Gaps = 9/141 (6%) Query: 18 QTQKMKRHLLQDIRRSAYVYR-VDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHAD 76 +T+++KR + +++ + +R V G N E EI A+ +FD+E I+VV+SP+HAD Sbjct: 120 ETEEVKR-FRKTTKKTGFQFREVAASGNNTTEAEINASFNALFDSEASKIRVVASPKHAD 178 Query: 77 ILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDV 136 L+++G V M P A+E+ P K V+ G+ V GG+F G P D+ Sbjct: 179 ALVYSGPVGPNMEEPLNTAWETMPSPKALVACGSEAVSGGLFK------LGKLPKEP-DL 231 Query: 137 WIPGCPPTPAATIHGFAVALG 157 +I G PP P I F +G Sbjct: 232 FIGGDPPRPDVIISAFRYLMG 252 >UniRef50_C9RJJ6 NADH-quinone oxidoreductase, B subunit n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJJ6_FIBSS Length = 211 Score = 73.6 bits (179), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 44/123 (35%), Positives = 62/123 (50%), Gaps = 6/123 (4%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVVS-SPRHADILLFTGAVTRAMRMPALRAYESAPD 101 G C IE + +D R G + V +PR +D+LL G +T R YE + Sbjct: 33 GTACCAIEFMSTEVGRYDLSRIGSEYVRFTPRQSDVLLVAGTITYKQAPILKRIYEQMAE 92 Query: 102 HKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQ 161 + ++ GAC GG F+D Y G D I+P+DV+I GCPP P A F A+ LQ+ Sbjct: 93 PRWVIAMGACASSGG-FYDCYCTVPGIDHIIPVDVYIGGCPPRPEA----FFDAMFDLQK 147 Query: 162 KIH 164 K+ Sbjct: 148 KVK 150 >UniRef50_A4WJL4 NADH-quinone oxidoreductase, B subunit n=6 Tax=Thermoproteaceae RepID=A4WJL4_PYRAR Length = 196 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 49/149 (32%), Positives = 78/149 (52%), Gaps = 12/149 (8%) Query: 15 LDEQTQKMKRHLLQDIRRSAYVYRVDCGGC-----------NACEIEIFAAITPVFDAER 63 +D+ T M + L + + + A + ++ G + C +E+ P FDAER Sbjct: 1 MDKPTTSMSQALREFLLKKAKLEKIFNWGVRWSLWPVHLVTSCCGVEVAHTSGPGFDAER 60 Query: 64 FGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYS 123 +G+ + R ++++L G +TR M YE P+ K ++ GAC V GG+F + Y Sbjct: 61 WGVLPFHTMRQSNVILVEGTITRKMAKVLKMVYEQMPEPKFVLAMGACAVRGGLFWNSYH 120 Query: 124 VWGGSDTIVPIDVWIPGCPPTPAATIHGF 152 V DT+VP+DV+I GCPPTP A + F Sbjct: 121 V-VQVDTVVPVDVYIAGCPPTPEAVVRAF 148 >UniRef50_Q64DY8 F420H2-quinone oxidoreductase 45 kD subunit n=8 Tax=Archaea RepID=Q64DY8_9ARCH Length = 788 Score = 72.4 bits (176), Expect = 1e-11, Method: Composition-based stats. Identities = 42/123 (34%), Positives = 61/123 (49%), Gaps = 5/123 (4%) Query: 45 NACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKI 104 + C +E+ +D ER G + R A+ ++ G +TR M +E PD K Sbjct: 38 SCCGVELAHTGACGYDMERLGTLNMGISRQANFIMVEGTITRKMARALRIVWEQMPDPKF 97 Query: 105 CVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIH 164 G CG GGIF + Y++ SD IVP+D +IPGCP TP + + G +Q+KI Sbjct: 98 VNVIGTCGQRGGIFWNSYNITRPSD-IVPVDFFIPGCPITPESLLRGVRA----VQEKIE 152 Query: 165 AVD 167 D Sbjct: 153 GRD 155 >UniRef50_Q6C2Q1 YALI0F06050p n=1 Tax=Yarrowia lipolytica RepID=Q6C2Q1_YARLI Length = 216 Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 2/93 (2%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALR-AYESAPD 101 G C +E+ P +D +R GI +SPR +DI++ G +T M P LR Y+ P+ Sbjct: 82 GLACCAVEMMHVSAPRYDQDRLGIIFRASPRQSDIMIVAGTLTNKM-APVLRQVYDQMPE 140 Query: 102 HKICVSYGACGVGGGIFHDLYSVWGGSDTIVPI 134 + +S G+C GGG +H YSV G D IVP+ Sbjct: 141 PRWVISMGSCANGGGYYHFSYSVVRGCDRIVPV 173 >UniRef50_Q2WGH7 NADH dehydrogenase subunit K (Fragment) n=1 Tax=Selaginella uncinata RepID=Q2WGH7_SELUN Length = 215 Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 2/129 (1%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDH 102 G + C E I D++R G SSPR AD+++ G T M +R+YE P+ Sbjct: 65 GTSCCFTEFAPLIGSRSDSDRHGSVPRSSPRQADLIITAGTATTKMAPSLVRSYEQTPEP 124 Query: 103 KICVSYGACGVGGGIFH-DLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQ 161 K ++ GAC V GG+ D +S G D +P D + PG PP P A + + + Sbjct: 125 KHAIAMGACTVTGGMLSTDPHSTVRGVDKSIPADTYPPGRPPKPEAIVDATIKPREKVSR 184 Query: 162 KIHAVDYRD 170 + + +YRD Sbjct: 185 ETYD-NYRD 192 >UniRef50_UPI0001C31273 NADH-quinone oxidoreductase, B subunit n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31273 Length = 229 Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 43/124 (34%), Positives = 64/124 (51%), Gaps = 7/124 (5%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVV-SSPRHADILLFTGAVTRAMRMPALRAYESAPD 101 G C IE+ + D RFG + +SPR AD+L+ +G V+ M R Y+ + Sbjct: 71 GLACCAIEMMSLPGARLDIGRFGFEAFRASPRQADMLILSGRVSIKMAPIVRRIYDQMLE 130 Query: 102 HKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQ 161 + +S GAC G+F++ V +D +PIDV +PGCPP P A H A+ L+ Sbjct: 131 PRWAISMGACCSSMGVFNNYALV--PADKFMPIDVHVPGCPPRPEALAH----AILKLRS 184 Query: 162 KIHA 165 K+H Sbjct: 185 KVHG 188 >UniRef50_D2RET0 NADH-quinone oxidoreductase, B subunit n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RET0_ARCPR Length = 709 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 12/187 (6%) Query: 47 CEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICV 106 C +E+ A +DAER G R ++++ GA+TR M +E P+ K + Sbjct: 21 CGVELAHAYACGYDAERIGSLNYGICRQTNLIIVEGAITRKMARVLRITWEQMPNPKFVI 80 Query: 107 SYGACGVGGGIFHDLYSV---WGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKI 163 GACG+ GG+F + Y + W V +PGCPPTP A I G ++ K Sbjct: 81 VMGACGIKGGLFKNSYHMVRPWDVVPVDVF----VPGCPPTPEALIRGIVALQKKIEGKE 136 Query: 164 HAVDYRDPTGVTMQPLWPQIPPSQRIAIEREARRLAGYRQGREICDRLLRHLSDDPTGNR 223 + + + + ++PP + +E A + +GR+ + L +D G R Sbjct: 137 DFDKFEEVSIEVEKGKVRKLPPLKEFRVENPA-VVPNVERGRDDYAKTL----EDVLGVR 191 Query: 224 VNTWLRD 230 V T +D Sbjct: 192 VYTVGKD 198 >UniRef50_B8D5A0 NADH-quinone oxidoreductase, B subunit n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D5A0_DESK1 Length = 337 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 6/124 (4%) Query: 26 LLQDIRRSAYVYRV----DCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFT 81 +L+ I R AY + C C A +E + D ER+G SPR +D+ + Sbjct: 1 MLERIARWAYARSLWMIHYCSACGA--VEFPPLVMAPLDWERYGYMPTPSPRQSDLYIGM 58 Query: 82 GAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGC 141 G +T+ L Y P+ K+ ++ C GG + D Y+ + D + ++ W+PGC Sbjct: 59 GYLTKKTVKLVLNMYRQMPEPKLVLAGCNCTSTGGPYWDSYATYKRLDDFIEVEGWVPGC 118 Query: 142 PPTP 145 P P Sbjct: 119 MPMP 122 >UniRef50_Q0BPG7 Formate hydrogenlyase subunit 7 n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BPG7_GRABC Length = 174 Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 1/117 (0%) Query: 36 VYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRA 95 + V+ GG +AC +E+ A R G++ V+SP HADILL TG + +A Sbjct: 48 ILHVESGGGSACLLELEALRAAPGLLARHGLRFVTSPLHADILLITGDGCHNLTSAIHQA 107 Query: 96 YESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGF 152 +E+ P + ++ G G G+ Y+ G + I P D+ IPG PP + G Sbjct: 108 WEAMPGPRWAIAVGDGAAGDGLLRGSYASTGNMEEI-PFDLVIPGSPPAADTILSGL 163 >UniRef50_B9SD17 NADH-ubiquinone oxidoreductase I subunit j, putative n=1 Tax=Ricinus communis RepID=B9SD17_RICCO Length = 188 Score = 60.1 bits (144), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 5/79 (6%) Query: 93 LRAYESAPDHKICVSYGACGVGGGIFH-DLYSVWGGSDTIVPIDVWIPGCPPTPAATIHG 151 +R YE P+ K ++ GAC + GG+F D YS G D ++P+D ++ GCPP P A I Sbjct: 6 VRLYEQIPEPKYVIAMGACTITGGMFSTDSYSTIRGVDKLIPVDAYLSGCPPKPEAVID- 64 Query: 152 FAVALGLLQQKIHAVDYRD 170 A+ L++K+ Y D Sbjct: 65 ---AITKLRKKLSREIYED 80 >UniRef50_UPI0000EC9F96 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (NADH-ubiquinone oxidoreductase 20 kDa subunit) (Complex I-20kD) (CI-20kD) (PSST subunit). n=1 Tax=Gallus gallus RepID=UPI0000EC9F96 Length = 176 Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 4/56 (7%) Query: 108 YGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKI 163 + +C GGG +H YSV G D IVP+D+++PGCPPT A ++G LQ+KI Sbjct: 113 FCSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGIL----QLQKKI 164 >UniRef50_UPI0000E81815 PREDICTED: hypothetical protein n=1 Tax=Gallus gallus RepID=UPI0000E81815 Length = 187 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 26/53 (49%), Positives = 34/53 (64%), Gaps = 4/53 (7%) Query: 111 CGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKI 163 C GGG +H YSV G D IVP+D+++PGCPPT A ++G LQ+KI Sbjct: 127 CANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGIL----QLQKKI 175 >UniRef50_A8A9X3 NADH-quinone oxidoreductase, B subunit n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8A9X3_IGNH4 Length = 207 Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 32/129 (24%), Positives = 51/129 (39%), Gaps = 10/129 (7%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDH 102 G C IE+ A D ER G+ ++PR D++L G V R + R + P Sbjct: 38 GIMCCAIEMMQAAFAFHDFERLGVLARATPRQVDVILINGPVNRKLAERLRRLFMQTPGP 97 Query: 103 KICVSYGACGVGGGIFHDLYSVWGGSDTIV---PID-------VWIPGCPPTPAATIHGF 152 + + G C + GG + V G ++ P + V + GCPP P + Sbjct: 98 RFVIVMGECAINGGPWWQSDYVLDGIHEVIESLPEEYRKDVHVVNLAGCPPRPEGLLRAI 157 Query: 153 AVALGLLQQ 161 L+ + Sbjct: 158 LKMEELINE 166 >UniRef50_Q2H7B9 Putative uncharacterized protein n=1 Tax=Chaetomium globosum RepID=Q2H7B9_CHAGB Length = 189 Score = 46.6 bits (109), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 33/123 (26%), Positives = 49/123 (39%), Gaps = 48/123 (39%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDH 102 G C IE+ P +D +R GI +SPR +D+++ Sbjct: 104 GLACCAIEMMHLSMPRYDNDRQGIIFRASPRQSDVMI----------------------- 140 Query: 103 KICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQK 162 V GG D IVP+D+++PGCPPT A +G + LQ+K Sbjct: 141 ---------------------VAGGVDRIVPVDIYVPGCPPTAEALQYG----IFQLQKK 175 Query: 163 IHA 165 + A Sbjct: 176 MAA 178 >UniRef50_Q9H3K5 My017 protein n=3 Tax=Eukaryota RepID=Q9H3K5_HUMAN Length = 214 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPD 101 G C +E+ P +D +RFG+ +SPR +D+++ G +T M PALR PD Sbjct: 85 GLACCAVEMMHMAAPRYDMDRFGVVFRASPRQSDVMIVAGTLTNKM-APALRKSPPRPD 142 >UniRef50_B7QG38 NADH-plastoquinone oxidoreductase, putative n=1 Tax=Ixodes scapularis RepID=B7QG38_IXOSC Length = 162 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 30/47 (63%) Query: 94 RAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPG 140 + Y+ + + +S G+C GGG +H YSV G D I+P+D+++PG Sbjct: 79 KVYDQMLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPG 125 >UniRef50_UPI000194DF39 PREDICTED: similar to NADH-ubiquinone oxidoreductase Fe-S protein 7 n=1 Tax=Taeniopygia guttata RepID=UPI000194DF39 Length = 183 Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust. Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 1/52 (1%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALR 94 G C +E+ P +D +RFG+ +SPR AD+++ G +T M PALR Sbjct: 94 GLACCAVEMMHMAAPRYDMDRFGVVFRASPRQADVMIVAGTLTNKM-APALR 144 >UniRef50_C5A2R7 Coenzyme F420 hydrogenase subunit gamma (FrhG) n=1 Tax=Thermococcus gammatolerans EJ3 RepID=C5A2R7_THEGJ Length = 229 Score = 42.4 bits (98), Expect = 0.013, Method: Compositional matrix adjust. Identities = 36/128 (28%), Positives = 54/128 (42%), Gaps = 23/128 (17%) Query: 36 VYRVDCGGCNACEIEIFAAITPVFDAERFGIKVV--SSPRHA--DILLFTGAVTRAMRMP 91 V VD GC C + I A + + I + S ++ D+ L TG M P Sbjct: 9 VLHVDFAGCEGCNVSIIRAYPKLMNEIDLDISYLRDGSCQYGEYDVALITGGA--CMNEP 66 Query: 92 AL--RAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSD------------TIVPIDVW 137 + E ++ V++G+C GGI L GG + +++P+D Sbjct: 67 RILEELKEIREKARVVVAFGSCASLGGI---LRFARGGQEPRPDHRNFQPINSVIPVDYS 123 Query: 138 IPGCPPTP 145 IPGCPPTP Sbjct: 124 IPGCPPTP 131 >UniRef50_A5UWN9 NADH ubiquinone oxidoreductase, 20 kDa subunit n=2 Tax=Roseiflexus RepID=A5UWN9_ROSS1 Length = 127 Score = 41.2 bits (95), Expect = 0.030, Method: Compositional matrix adjust. Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 16/121 (13%) Query: 36 VYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRA 95 VYR + G C C++E+ AA+ D ++P AD+LL TG +T + A A Sbjct: 4 VYRFNTGSCGGCDLEVIAALAAAADI-----DWAATPHEADVLLLTGPLTTDTKK-AFMA 57 Query: 96 YESAPDHKI-CVSYGACGVGGGIFHDLYSVWGGSDTIVP---IDVWIPGCPPTPAATIHG 151 DH+ ++ G C + G F G ++P + + + GCPPTP + Sbjct: 58 LLQELDHRAPIIAVGRCAIDGHPF------GRGGVAVIPNLTVHLSLDGCPPTPTQIVEA 111 Query: 152 F 152 Sbjct: 112 I 112 >UniRef50_B6YTV9 Coenzyme F420 hydrogenase gamma subunit n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YTV9_THEON Length = 225 Score = 41.2 bits (95), Expect = 0.035, Method: Compositional matrix adjust. Identities = 34/128 (26%), Positives = 48/128 (37%), Gaps = 23/128 (17%) Query: 36 VYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPR----HADILLFTGAVTRAMRMP 91 V VD GGC C + I A + D I + D+ + TG M P Sbjct: 6 VLHVDVGGCEGCNVSIIRAYPKLMDLIELDISYLRKDECKLDEYDVAIITGGA--CMNEP 63 Query: 92 AL--RAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSD------------TIVPIDVW 137 + E V++G+C GI L GG + +++ +D Sbjct: 64 RILEELKEIREKAHTVVAFGSCATFSGI---LRFCRGGQEPRPDHRNFQPINSVIKVDYS 120 Query: 138 IPGCPPTP 145 IPGCPPTP Sbjct: 121 IPGCPPTP 128 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P16433 Formate hydrogenlyase subunit 7 n=169 Tax=Bacter... 309 6e-83 UniRef50_C7MLM8 Ni,Fe-hydrogenase III small subunit n=20 Tax=Bac... 298 1e-79 UniRef50_C6ANV6 Hydrogenase-4 component I n=6 Tax=Gammaproteobac... 288 2e-76 UniRef50_A7GWN3 HsdS n=9 Tax=Proteobacteria RepID=A7GWN3_CAMC5 264 2e-69 UniRef50_Q0W2C0 Hydrogenase, small subunit-like protein (HycG-li... 227 2e-58 UniRef50_B6YT72 Hydrogenase 4, component I or formate hydrogen l... 226 4e-58 UniRef50_C5A2Q7 Formate hydrogenlyase II subunit H (Mhy2H) n=3 T... 224 2e-57 UniRef50_C7IG01 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 221 2e-56 UniRef50_A1ASR2 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 219 9e-56 UniRef50_B1ZSE5 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 218 2e-55 UniRef50_B6YU96 Membrane bound hydrogenase, NiFe-hydrogenase sma... 217 2e-55 UniRef50_A3DKH2 NADH-quinone oxidoreductase, B subunit n=5 Tax=c... 217 3e-55 UniRef50_B9L8U0 Hydrogenase-4 component I n=2 Tax=Epsilonproteob... 214 3e-54 UniRef50_B6IT61 Hydrogenase-4 component I n=4 Tax=Bacteria RepID... 209 5e-53 UniRef50_A6UVJ5 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 209 6e-53 UniRef50_O21272 NADH-ubiquinone oxidoreductase 20 kDa subunit n=... 209 6e-53 UniRef50_B6GAA3 Putative uncharacterized protein n=1 Tax=Collins... 209 7e-53 UniRef50_B0TH78 NADH-quinone oxidoreductase subunit B n=5 Tax=Ba... 209 7e-53 UniRef50_C8W241 Hydrogenase, small subunit-like protein n=1 Tax=... 209 8e-53 UniRef50_A6L170 NADH-quinone oxidoreductase subunit B n=35 Tax=B... 209 8e-53 UniRef50_B3QY47 NADH-quinone oxidoreductase subunit B 2 n=8 Tax=... 209 9e-53 UniRef50_A9KS72 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 208 2e-52 UniRef50_Q9DC70 NADH dehydrogenase [ubiquinone] iron-sulfur prot... 207 3e-52 UniRef50_B5YKI3 NADH-quinone oxidoreductase subunit B 1 n=1 Tax=... 207 3e-52 UniRef50_B6YTX0 Hydrogenase 4, component I or formate hydrogen l... 207 3e-52 UniRef50_B2IID4 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 205 8e-52 UniRef50_A6LXQ4 NADH-quinone oxidoreductase subunit B n=4 Tax=Ba... 205 1e-51 UniRef50_C7NUN9 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 205 1e-51 UniRef50_B8J1E3 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 205 1e-51 UniRef50_C6PUG1 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 205 1e-51 UniRef50_B2A054 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 204 2e-51 UniRef50_Q8DKZ4 NAD(P)H-quinone oxidoreductase subunit K n=21 Ta... 203 5e-51 UniRef50_O75251 NADH dehydrogenase [ubiquinone] iron-sulfur prot... 202 1e-50 UniRef50_Q1AVI4 NADH-quinone oxidoreductase subunit B n=15 Tax=B... 202 1e-50 UniRef50_Q0BSK3 NADH-quinone oxidoreductase subunit B n=31 Tax=c... 201 1e-50 UniRef50_A7I7C9 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 199 5e-50 UniRef50_A5UXK1 NADH-quinone oxidoreductase subunit B 1 n=13 Tax... 199 6e-50 UniRef50_D2R6Y4 NADH-quinone oxidoreductase, B subunit n=1 Tax=P... 199 9e-50 UniRef50_A1RWL1 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 197 2e-49 UniRef50_C5GDP9 NADH-ubiquinone oxidoreductase 20 kDa subunit n=... 197 3e-49 UniRef50_B8HLE8 NAD(P)H-quinone oxidoreductase subunit K 2 n=94 ... 197 3e-49 UniRef50_B2V8R1 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 197 3e-49 UniRef50_D0L1N9 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 196 7e-49 UniRef50_B4U8H3 NADH-quinone oxidoreductase subunit B n=4 Tax=Ba... 196 7e-49 UniRef50_C1ZCK3 NADH dehydrogenase subunit B n=1 Tax=Planctomyce... 195 8e-49 UniRef50_A5TDF9 NADH-quinone oxidoreductase, B subunit n=2 Tax=p... 195 9e-49 UniRef50_B1W4V9 NADH-quinone oxidoreductase subunit B 2 n=27 Tax... 195 1e-48 UniRef50_A8M069 NADH-quinone oxidoreductase subunit B 1 n=6 Tax=... 195 1e-48 UniRef50_Q39SF9 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 194 3e-48 UniRef50_Q3ZXS0 NADH-quinone oxidoreductase subunit B n=5 Tax=De... 194 4e-48 UniRef50_Q1IL91 NADH-quinone oxidoreductase subunit B 2 n=4 Tax=... 193 4e-48 UniRef50_B6YR59 NADH-quinone oxidoreductase subunit B n=5 Tax=Ba... 193 5e-48 UniRef50_A9A345 NADH-quinone oxidoreductase, B subunit n=1 Tax=N... 193 5e-48 UniRef50_Q12F15 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 192 7e-48 UniRef50_A8MBS9 NADH-quinone oxidoreductase, B subunit n=5 Tax=T... 192 9e-48 UniRef50_A4EBM2 Putative uncharacterized protein n=1 Tax=Collins... 192 9e-48 UniRef50_Q1IPE7 NADH-quinone oxidoreductase subunit B 1 n=10 Tax... 192 9e-48 UniRef50_A9G9S9 NADH-quinone oxidoreductase subunit B 2 n=2 Tax=... 192 1e-47 UniRef50_Q1IZX2 NADH-quinone oxidoreductase subunit B n=16 Tax=c... 191 1e-47 UniRef50_B5E8B5 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 191 2e-47 UniRef50_A5FW47 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 191 2e-47 UniRef50_Q492H7 NADH-quinone oxidoreductase subunit B n=225 Tax=... 190 3e-47 UniRef50_Q24ST9 Formate hydrogenlyase subunit 7 n=2 Tax=Desulfit... 190 4e-47 UniRef50_A0RY66 NADH-ubiquinone oxidoreductase, subunit B n=3 Ta... 190 4e-47 UniRef50_C0QR84 NADH-quinone oxidoreductase chain b (Nadh dehydr... 189 6e-47 UniRef50_Q1D8S3 NADH-quinone oxidoreductase subunit B n=2 Tax=Cy... 189 7e-47 UniRef50_B3TC56 Putative NADH ubiquinone oxidoreductase, 20 Kd s... 189 8e-47 UniRef50_B6YWP9 NADH dehydrogenase (Ubiquinone), 20 kDa subunit ... 188 1e-46 UniRef50_A0B811 F420H2 dehydrogenase subunit B n=6 Tax=Archaea R... 188 1e-46 UniRef50_C5CEV5 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 187 2e-46 UniRef50_D2RET0 NADH-quinone oxidoreductase, B subunit n=1 Tax=A... 187 2e-46 UniRef50_Q2T5T7 Formate hydrogenlyase subunit 7 n=21 Tax=Bacteri... 187 3e-46 UniRef50_A3THJ2 NADH dehydrogenase beta subunit n=2 Tax=Bacteria... 187 3e-46 UniRef50_A6Q6W5 Ni-Fe hydrogenase, small subunit HycG n=3 Tax=Ep... 187 3e-46 UniRef50_A3PKI1 NADH-quinone oxidoreductase subunit B 2 n=6 Tax=... 187 4e-46 UniRef50_D2R5G9 NADH-quinone oxidoreductase, B subunit n=2 Tax=P... 186 6e-46 UniRef50_C9RKY2 NADH-quinone oxidoreductase, B subunit n=2 Tax=c... 186 7e-46 UniRef50_C9RJJ6 NADH-quinone oxidoreductase, B subunit n=1 Tax=F... 186 7e-46 UniRef50_Q57936 Uncharacterized protein MJ0516 n=21 Tax=Euryarch... 186 8e-46 UniRef50_B9L626 NADH-ubiquinone oxidoreductase 20 kDa subunit n=... 185 1e-45 UniRef50_C7PSH0 NADH-quinone oxidoreductase, B subunit n=4 Tax=S... 185 1e-45 UniRef50_Q26783 NADH dehydrogenase [ubiquinone] iron-sulfur prot... 185 1e-45 UniRef50_C1A8Z3 NADH-quinone oxidoreductase chain B n=1 Tax=Gemm... 184 2e-45 UniRef50_B1ZUJ0 NADH-quinone oxidoreductase subunit B 2 n=13 Tax... 184 2e-45 UniRef50_Q3A825 NADH-quinone oxidoreductase subunit B/C/D n=103 ... 184 3e-45 UniRef50_D2EGC1 NADH-quinone oxidoreductase, B subunit n=1 Tax=C... 184 3e-45 UniRef50_A4J659 NADH-quinone oxidoreductase subunit B n=34 Tax=F... 182 7e-45 UniRef50_UPI00016C3AA7 NADH-quinone oxidoreductase, B subunit n=... 182 7e-45 UniRef50_Q0W6T1 [NiFe]-hydrogenase, small subunit (EchC-like) n=... 182 8e-45 UniRef50_B0SFT5 NADH-quinone oxidoreductase subunit B n=13 Tax=c... 182 9e-45 UniRef50_A1RZ48 NADH-quinone oxidoreductase, B subunit n=3 Tax=T... 181 2e-44 UniRef50_A2BJ94 NAD(P)H-quinone oxidoreductase chain K n=10 Tax=... 181 2e-44 UniRef50_C1VB41 NADH dehydrogenase subunit B n=1 Tax=Halogeometr... 181 2e-44 UniRef50_A9GUX6 NADH-quinone oxidoreductase subunit B 1 n=10 Tax... 179 9e-44 UniRef50_B1ZRT2 NADH-quinone oxidoreductase subunit B 1 n=4 Tax=... 179 1e-43 UniRef50_B1KJU9 NADH-quinone oxidoreductase subunit B n=8 Tax=Pr... 179 1e-43 UniRef50_Q0RRW7 NADH-quinone oxidoreductase subunit B n=5 Tax=Ba... 179 1e-43 UniRef50_B0R3U2 NADH dehydrogenase-like complex subunit B n=11 T... 178 2e-43 UniRef50_C5A4Q2 Membrane bound oxidoreductase, MbxJ subunit (Mbx... 177 3e-43 UniRef50_Q2S5J2 NADH-quinone oxidoreductase subunit B n=4 Tax=Ba... 176 5e-43 UniRef50_C6X0Z2 NADH-ubiquinone oxidoreductase chain B n=2 Tax=F... 175 1e-42 UniRef50_Q21TB3 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 174 3e-42 UniRef50_C7IWD0 Os01g0791600 protein n=3 Tax=Oryza sativa Japoni... 174 3e-42 UniRef50_C7JEU9 NADH-ubiquinone oxidoreductase 20 kDa subunit n=... 173 5e-42 UniRef50_B8IYV4 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 173 7e-42 UniRef50_C7DI98 NADH-quinone oxidoreductase, B subunit n=1 Tax=C... 172 1e-41 UniRef50_B1L7S0 F420H2 dehydrogenase subunit n=3 Tax=Archaea Rep... 172 1e-41 UniRef50_UPI0001B52F0A hydrogenase 4, Fe-S subunit n=1 Tax=Shige... 172 1e-41 UniRef50_A9BJL8 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 170 3e-41 UniRef50_A1SQ82 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 168 1e-40 UniRef50_C5U7Y6 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 168 2e-40 UniRef50_B2N3C8 Hydrogenase-4 component I n=2 Tax=Enterobacteria... 167 3e-40 UniRef50_Q64DY8 F420H2-quinone oxidoreductase 45 kD subunit n=8 ... 167 3e-40 UniRef50_A0L9R6 Membrane bound protein complex subunit mbxJ n=1 ... 167 3e-40 UniRef50_Q58758 Uncharacterized protein MJ1363 n=17 Tax=Euryarch... 167 3e-40 UniRef50_C1XWY8 Ni,Fe-hydrogenase III small subunit n=1 Tax=Meio... 166 5e-40 UniRef50_B1ZSE7 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 165 2e-39 UniRef50_A4WJL4 NADH-quinone oxidoreductase, B subunit n=6 Tax=T... 163 4e-39 UniRef50_A3DM92 NADH-quinone oxidoreductase, B subunit n=1 Tax=S... 163 4e-39 UniRef50_A3ETD3 Putative hydrogenase-3 (HycG) n=3 Tax=Leptospiri... 163 5e-39 UniRef50_B5ZJ00 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 160 3e-38 UniRef50_UPI0001C31273 NADH-quinone oxidoreductase, B subunit n=... 159 6e-38 UniRef50_D2PJN5 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 158 1e-37 UniRef50_D1B297 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 158 1e-37 UniRef50_Q978D5 Formate hydrogenlyase subunit 2 n=2 Tax=Thermopl... 158 1e-37 UniRef50_A4YGN5 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 157 2e-37 UniRef50_Q6C2Q1 YALI0F06050p n=1 Tax=Yarrowia lipolytica RepID=Q... 157 4e-37 UniRef50_B5ICA0 NADH ubiquinone oxidoreductase, 20 Kd subunit fa... 155 1e-36 UniRef50_A8A9X3 NADH-quinone oxidoreductase, B subunit n=1 Tax=I... 154 3e-36 UniRef50_A6DAC3 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 150 4e-35 UniRef50_A5FW77 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 149 9e-35 UniRef50_Q2WGH7 NADH dehydrogenase subunit K (Fragment) n=1 Tax=... 147 4e-34 UniRef50_B8D5A0 NADH-quinone oxidoreductase, B subunit n=1 Tax=D... 145 1e-33 UniRef50_Q6L0U2 Formate hydrogenlyase subunit 7 n=1 Tax=Picrophi... 142 1e-32 UniRef50_B0SCU6 Metal (Ni/Fe) hydrogenase, small subunit n=2 Tax... 140 5e-32 UniRef50_A0LSU0 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 138 2e-31 UniRef50_Q5FU78 Putative uncharacterized protein n=1 Tax=Glucono... 136 9e-31 UniRef50_Q0BPG7 Formate hydrogenlyase subunit 7 n=1 Tax=Granulib... 135 2e-30 UniRef50_Q04P25 Metal (Ni/Fe) hydrogenase, small subunit n=4 Tax... 125 1e-27 UniRef50_B9SD17 NADH-ubiquinone oxidoreductase I subunit j, puta... 117 4e-25 UniRef50_Q2H7B9 Putative uncharacterized protein n=1 Tax=Chaetom... 109 1e-22 UniRef50_Q9H3K5 My017 protein n=3 Tax=Eukaryota RepID=Q9H3K5_HUMAN 95 2e-18 UniRef50_UPI0000EC9F96 NADH dehydrogenase [ubiquinone] iron-sulf... 89 1e-16 UniRef50_UPI0000E81815 PREDICTED: hypothetical protein n=1 Tax=G... 84 5e-15 Sequences not found previously or not previously below threshold: UniRef50_UPI000194DF39 PREDICTED: similar to NADH-ubiquinone oxi... 105 2e-21 UniRef50_B7QG38 NADH-plastoquinone oxidoreductase, putative n=1 ... 88 2e-16 UniRef50_C1GND6 NADH-ubiquinone oxidoreductase 20 kDa subunit n=... 82 2e-14 UniRef50_Q6A6I9 NADH dehydrogenase subunit n=2 Tax=Propionibacte... 76 1e-12 UniRef50_A5UWN9 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 73 6e-12 UniRef50_C7J5D7 Os07g0116900 protein n=3 Tax=Oryza sativa RepID=... 70 9e-11 UniRef50_P80491 Coenzyme F420 hydrogenase subunit gamma n=27 Tax... 70 1e-10 UniRef50_A6UVU9 Coenzyme F420 hydrogenase n=2 Tax=Euryarchaeota ... 66 1e-09 UniRef50_C5A2R7 Coenzyme F420 hydrogenase subunit gamma (FrhG) n... 64 4e-09 UniRef50_C7MNR7 Hydrogenase (NiFe) small subunit HydA n=4 Tax=Co... 58 3e-07 UniRef50_B8G3U7 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 58 3e-07 UniRef50_B6YTV9 Coenzyme F420 hydrogenase gamma subunit n=1 Tax=... 57 4e-07 UniRef50_A0LLU1 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 57 4e-07 UniRef50_B5YB68 NAD-reducing hydrogenase HoxS delta subunit n=2 ... 57 5e-07 UniRef50_A9B2V8 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 55 2e-06 UniRef50_Q58591 F420-non-reducing hydrogenase vhu subunit G n=13... 55 3e-06 UniRef50_Q00393 Coenzyme F420 hydrogenase subunit gamma n=3 Tax=... 55 3e-06 UniRef50_B9L8N0 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 54 4e-06 UniRef50_Q58136 Uncharacterized protein MJ0726 n=3 Tax=Methanoca... 53 9e-06 UniRef50_C6YT65 Predicted protein n=2 Tax=Francisella philomirag... 53 1e-05 UniRef50_Q85WY3 ORF82a n=1 Tax=Pinus koraiensis RepID=Q85WY3_PINKO 52 2e-05 UniRef50_C8X546 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 52 3e-05 UniRef50_A0LP54 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 52 3e-05 UniRef50_Q21RP8 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 51 3e-05 UniRef50_C1DUF2 Quinone-reactive Ni/Fe-hydrogenase small chain (... 51 4e-05 UniRef50_Q3M430 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 50 5e-05 UniRef50_Q8TYW2 Coenzyme F420-reducing hydrogenase, gamma subuni... 50 6e-05 UniRef50_B1L5Y5 Coenzyme F420-reducing hydrogenase, gamma subuni... 50 8e-05 UniRef50_Q8TXX1 Coenzyme F420-reducing hydrogenase, gamma subuni... 50 9e-05 UniRef50_C6A155 NiFe hydrogenase I, subunit delta n=1 Tax=Thermo... 50 1e-04 UniRef50_A1SU83 Hydrogen dehydrogenase n=23 Tax=Proteobacteria R... 49 2e-04 UniRef50_A7IHL6 Ni Fe-hydrogenase III large subunit-like protein... 48 2e-04 UniRef50_D2BHA4 Nickel-dependent hydrogenase, group 3, small sub... 48 2e-04 UniRef50_C0QEJ1 HynB n=4 Tax=Deltaproteobacteria RepID=C0QEJ1_DESAH 47 5e-04 UniRef50_B6YU80 Cytosolic NiFe-hydrogenase, delta subunit n=9 Ta... 47 5e-04 UniRef50_B4SFA2 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 47 7e-04 UniRef50_UPI0001C420D3 coenzyme F420 hydrogenase gamma subunit F... 47 9e-04 UniRef50_Q2LYD8 Nickel-dependent hydrogenase, small chain n=2 Ta... 46 0.001 UniRef50_A5UM99 Coenzyme F420-reducing hydrogenase, gamma subuni... 45 0.002 UniRef50_C1DUT4 Putative [NiFe] hydrogenase, delta subunit n=1 T... 45 0.002 UniRef50_Q1AZS0 Ni Fe-hydrogenase III large subunit-like protein... 45 0.002 UniRef50_D1U6F3 Hydrogenase (NiFe) small subunit HydA n=1 Tax=De... 45 0.002 UniRef50_B8FWY3 Hydrogenase (NiFe) small subunit HydA n=2 Tax=De... 45 0.002 UniRef50_P13061 Periplasmic [NiFe] hydrogenase small subunit n=6... 45 0.003 UniRef50_Q3ABV6 [Ni/Fe] hydrogenase, small subunit n=3 Tax=Clost... 45 0.003 UniRef50_B6YSK0 Sulfhydrogenase II, delta chain n=6 Tax=Thermoco... 45 0.003 UniRef50_O28898 Methylviologen-reducing hydrogenase, subunit gam... 44 0.004 UniRef50_A7BI79 Ni,Fe-hydrogenase small subunit n=2 Tax=Aquifica... 44 0.005 UniRef50_D0NDQ9 Putative uncharacterized protein n=1 Tax=Phytoph... 43 0.006 UniRef50_C8QXK1 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 43 0.006 UniRef50_Q59113 Hydrogenase small beta subunit n=2 Tax=Bacteria ... 43 0.007 UniRef50_A6DCC1 NI/FE-HYDROGENASE SMALL SUBUNIT n=1 Tax=Caminiba... 43 0.009 UniRef50_Q2J4E9 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 42 0.014 UniRef50_A9E0C1 Putative uncharacterized protein n=1 Tax=Oceanib... 42 0.016 UniRef50_A8UU12 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 42 0.016 UniRef50_Q0W2X8 Coenzyme F420-reducing hydrogenase, gamma subuni... 42 0.020 UniRef50_B2TM84 [Ni/Fe] hydrogenase, small subunit n=2 Tax=Clost... 42 0.022 UniRef50_Q0FXV5 Putative uncharacterized protein n=1 Tax=Fulvima... 41 0.025 UniRef50_C7NPL1 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 41 0.027 UniRef50_B1ZXG1 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 41 0.033 UniRef50_P61429 Periplasmic [NiFe] hydrogenase small subunit 2 n... 41 0.037 UniRef50_Q39QE2 F420-non-reducing hydrogenase subunit G n=5 Tax=... 41 0.040 UniRef50_D1Z1F3 Coenzyme F420 hydrogenase subunit gamma n=1 Tax=... 40 0.054 UniRef50_A5GFC8 Hydrogenase (NiFe) small subunit HydA n=6 Tax=Pr... 40 0.082 UniRef50_Q2KJQ3 HoxY n=4 Tax=Proteobacteria RepID=Q2KJQ3_CHRVI 40 0.086 >UniRef50_P16433 Formate hydrogenlyase subunit 7 n=169 Tax=Bacteria RepID=HYCG_ECOLI Length = 255 Score = 309 bits (791), Expect = 6e-83, Method: Composition-based stats. Identities = 152/248 (61%), Positives = 181/248 (72%), Gaps = 2/248 (0%) Query: 1 MSPVLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFD 60 + P + P+T+DE MK LL+ I+RSAYVYRVDCGGCN CEIEIFA ++P+FD Sbjct: 5 LGPRDANGIPVPMTVDESIASMKASLLKKIKRSAYVYRVDCGGCNGCEIEIFATLSPLFD 64 Query: 61 AERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHD 120 AERFGIKVV SPRHADILLFTGAVTRAMR PALRA++SAPD KIC+SYGACG GGIFHD Sbjct: 65 AERFGIKVVPSPRHADILLFTGAVTRAMRSPALRAWQSAPDPKICISYGACGNSGGIFHD 124 Query: 121 LYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLW 180 LY VWGG+D IVP+DV+IPGCPPTPAAT++GFA+ALGLL+QKIHA + + L Sbjct: 125 LYCVWGGTDKIVPVDVYIPGCPPTPAATLYGFAMALGLLEQKIHARGPGELDEQPAEILH 184 Query: 181 PQIPPSQRIAIEREARRLAGYRQGREICDRLLRHLSDDPTGNRVNTWLRDADDPRLNSIV 240 + R+ ++REARRLAGYR GR+I D L L +V WL +DPRLN IV Sbjct: 185 GDMVQPLRVKVDREARRLAGYRYGRQIADDYLTQLGQGE--EQVARWLEAENDPRLNEIV 242 Query: 241 QQLFRVLR 248 L V+ Sbjct: 243 SHLNHVVE 250 >UniRef50_C7MLM8 Ni,Fe-hydrogenase III small subunit n=20 Tax=Bacteria RepID=C7MLM8_CRYCD Length = 283 Score = 298 bits (763), Expect = 1e-79, Method: Composition-based stats. Identities = 135/243 (55%), Positives = 171/243 (70%), Gaps = 2/243 (0%) Query: 7 QHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGI 66 Q+ +P LD++ + K LL DI+RS Y+YRVDCGGCN CEIEIF +TPVFDAERFGI Sbjct: 32 QYQLEPKVLDQKIAEAKAALLNDIKRSVYIYRVDCGGCNGCEIEIFGTLTPVFDAERFGI 91 Query: 67 KVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWG 126 K ++SPRHADIL++TGAVTRAMR+PALRAYE+APD K+ VSYGACG GGIFHD Y VWG Sbjct: 92 KNMASPRHADILVYTGAVTRAMRLPALRAYEAAPDPKLIVSYGACGCTGGIFHDNYCVWG 151 Query: 127 GSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPS 186 G+D + P+DV+IPGCPP+PA TI+GFA+ALGLL QK+H + G ++ IP Sbjct: 152 GTDKLFPVDVYIPGCPPSPAQTIYGFAMALGLLGQKLHEKHLVEGEGEQAPIMFADIPYK 211 Query: 187 QRIAIEREARRLAGYRQGREICDRLLRHL--SDDPTGNRVNTWLRDADDPRLNSIVQQLF 244 R +EREARR+AGY GR++ D ++ L D V+ + DPR I L Sbjct: 212 LRCELEREARRMAGYVYGRDLVDTFMQALEPEDGKVLTSVDALIEAESDPRKVEIYADLK 271 Query: 245 RVL 247 ++L Sbjct: 272 QIL 274 >UniRef50_C6ANV6 Hydrogenase-4 component I n=6 Tax=Gammaproteobacteria RepID=C6ANV6_AGGAN Length = 258 Score = 288 bits (736), Expect = 2e-76, Method: Composition-based stats. Identities = 153/247 (61%), Positives = 190/247 (76%), Gaps = 3/247 (1%) Query: 3 PVLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAE 62 P+ +S P ++DE KMK+ LL++I+RSAYVYRVDCGGCN CEIEIF+ ITPVFDAE Sbjct: 6 PMPVNGISTPFSIDENIAKMKQALLKNIQRSAYVYRVDCGGCNGCEIEIFSTITPVFDAE 65 Query: 63 RFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLY 122 RFGIKVV+SPRHADILLFTG+VTRAMR PA+RAY++APD KIC++YGACG GGGIFHDLY Sbjct: 66 RFGIKVVASPRHADILLFTGSVTRAMRTPAMRAYQAAPDPKICIAYGACGCGGGIFHDLY 125 Query: 123 SVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQ 182 VWGGSD IVP+DV+IPGCPPTPAATI+GFA+ALGLL QK+ + + +P Sbjct: 126 CVWGGSDQIVPVDVYIPGCPPTPAATIYGFAMALGLLDQKLKGKQEKADPNAEAKLRFPT 185 Query: 183 IPPSQRIAIEREARRLAGYRQGREICDRLLRHLSDD---PTGNRVNTWLRDADDPRLNSI 239 IP RI++EREARRLAGYRQG I ++ + +S+D P G R+ +L DPRL+ I Sbjct: 186 IPLDLRISLEREARRLAGYRQGGNIANQFMAMMSEDDKVPFGVRLGEYLEREADPRLSEI 245 Query: 240 VQQLFRV 246 + +L + Sbjct: 246 INRLHAI 252 >UniRef50_A7GWN3 HsdS n=9 Tax=Proteobacteria RepID=A7GWN3_CAMC5 Length = 274 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 111/242 (45%), Positives = 152/242 (62%), Gaps = 10/242 (4%) Query: 14 TLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPR 73 T ++ T K+ L++I+RS VYR+DCG CN CEIEIFAAITP++D ERFG K+V++PR Sbjct: 12 TANDLTAKL--EHLKNIKRSFSVYRIDCGSCNGCEIEIFAAITPMWDPERFGFKLVANPR 69 Query: 74 HADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVP 133 HADIL+ +G VTR M P LRAYE+APD KI V++GACG GGIFHD YSVWGG D I+P Sbjct: 70 HADILICSGPVTRQMYYPLLRAYEAAPDPKIVVAFGACGSSGGIFHDAYSVWGGIDKIIP 129 Query: 134 IDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQI-PPSQRIAIE 192 +DV+IPGCPP PA+ I+G +ALG++ QK+H Y D + + I ++ Sbjct: 130 VDVYIPGCPPHPASVIYGLGMALGIIDQKLHKKSYEDDSTLPPPVEKSVIGDILFERDLQ 189 Query: 193 REARRLAGYRQGREICDRLLRHLS-----DDPTGNRVNTW--LRDADDPRLNSIVQQLFR 245 E++RL Y GR + D+ + + DP R ++ +DPR + L Sbjct: 190 AESKRLMSYIFGRALFDKYMSAIKTASDVHDPNSARTAMLEAIKKEEDPRYAECMALLHN 249 Query: 246 VL 247 + Sbjct: 250 DV 251 >UniRef50_Q0W2C0 Hydrogenase, small subunit-like protein (HycG-like) n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W2C0_UNCMA Length = 247 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 63/160 (39%), Positives = 98/160 (61%) Query: 5 LTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERF 64 L ++ +++++ + + RS + VD G CN CE+E+ + ++D ERF Sbjct: 88 LASKAKPDFDVESSGRELEKKIKKAFGRSLAIREVDAGSCNGCEVEVNSLSNAIYDIERF 147 Query: 65 GIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSV 124 G+ +V+SPRHAD LL TG VTR M +++Y + PD K+ ++ GAC + GGIF D Y+V Sbjct: 148 GLHIVASPRHADALLVTGPVTRNMERGLMQSYNATPDPKMVIAMGACAITGGIFRDSYAV 207 Query: 125 WGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIH 164 + G D +VP+DV+IPGCPP P A I G +A+ ++K Sbjct: 208 YNGVDALVPVDVYIPGCPPRPQAIIQGIMLAIDRWEEKRK 247 >UniRef50_B6YT72 Hydrogenase 4, component I or formate hydrogen lyase, subunit 7 n=3 Tax=cellular organisms RepID=B6YT72_THEON Length = 266 Score = 226 bits (577), Expect = 4e-58, Method: Composition-based stats. Identities = 77/250 (30%), Positives = 120/250 (48%), Gaps = 32/250 (12%) Query: 32 RSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMP 91 +S +V+ VD G CN C+IEI +TP +DAER GIK+V SPRHAD LL +G +TR Sbjct: 5 KSVWVFHVDSGSCNGCDIEILDVLTPYYDAERLGIKLVPSPRHADALLVSGPLTRQTYYA 64 Query: 92 ALRAYESAPD-HKICVSYGACGVGGGIFHDLYSVWG-----GSDTI----VPI------- 134 AYE+ P +I V+ G C GGIF++ Y ++ GSD + + + Sbjct: 65 VKAAYEAMPPKPRIVVAIGTCASSGGIFYNGYPIYNPNPERGSDRLRTGGIEVLLAEYGK 124 Query: 135 --DVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQRI--A 190 D++IPGCPP+P ++G A LGL ++K+ Y ++ + P+ P +RI Sbjct: 125 KPDMYIPGCPPSPEEILYGLAQLLGLKEKKMKGEYY---YADEIEFVLPERPIEERIYLT 181 Query: 191 IEREARRLAGYRQGREICDRLLRHLSDDPTGNR--------VNTWLRDADDPRLNSIVQQ 242 + RR+ GY ++ + + + V + D R+ ++ Sbjct: 182 LRESLRRVVGYFDREKVLEDFMALVEKAQESENPRERLHELVIGYFLREKDSRVKFAIRF 241 Query: 243 LFRVLRGLHD 252 L L D Sbjct: 242 LENEYWRLKD 251 >UniRef50_C5A2Q7 Formate hydrogenlyase II subunit H (Mhy2H) n=3 Tax=Thermococcus RepID=C5A2Q7_THEGJ Length = 283 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 71/252 (28%), Positives = 124/252 (49%), Gaps = 34/252 (13%) Query: 32 RSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMP 91 RS YV+ +D G CN CEIE+F +TP +DAER G+++ +SPRHA + TG +TR Sbjct: 4 RSLYVFHLDTGACNGCEIELFDILTPYYDAERLGVRLAASPRHAHAMAATGPLTRQAYYA 63 Query: 92 ALRAYESAPD-HKICVSYGACGVGGGIFHDLYSVW---------------GGSDTIV--- 132 A A ++ P +I V+ G C GGIF++ Y ++ GG +V Sbjct: 64 AKEAIKAMPPKPRIIVAIGTCACSGGIFYNGYPIYRRPESGREGQEYPRRGGIFELVQDL 123 Query: 133 --------PIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIP 184 P+ V+IPGCPP P ++G A+ALGL+++++ Y + G + I Sbjct: 124 RDEGEYVGPV-VYIPGCPPRPEEILYGVALALGLVEKQVKGEYYTEEVGFELPEY--PIE 180 Query: 185 PSQRIAIEREARRLAGYRQGREICDRLLRHLSDDPTGNRVNTWLR----DADDPRLNSIV 240 R+++ + + GY ++ + + ++ + ++ ++ DPR++ + Sbjct: 181 ERIRLSLRERLKYVVGYFDREKVLEDFMELVAKAKSAEELHGLIQGYCLKNPDPRVSLAM 240 Query: 241 QQLFRVLRGLHD 252 + L R L + Sbjct: 241 RVLEREFLRLKE 252 >UniRef50_C7IG01 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IG01_9CLOT Length = 266 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 64/147 (43%), Positives = 86/147 (58%) Query: 13 ITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSP 72 + +K+ + + RS + VD G CN C+ EI A P D ERFGI V+SP Sbjct: 120 TDYELIGKKLNEKVAKKFGRSLNIREVDAGSCNGCDYEIQALNGPYNDIERFGIHFVASP 179 Query: 73 RHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIV 132 RHAD+LL TG V+R M ++ Y + P K+ V+ GAC GG+F D Y+ G DTI+ Sbjct: 180 RHADMLLVTGCVSRNMEEALVKTYNATPSPKLVVAAGACACSGGLFKDSYAGRNGIDTIL 239 Query: 133 PIDVWIPGCPPTPAATIHGFAVALGLL 159 P+DV+IPGCPP P A I+G +G L Sbjct: 240 PVDVYIPGCPPRPQALIYGILKGIGRL 266 >UniRef50_A1ASR2 NADH ubiquinone oxidoreductase, 20 kDa subunit n=3 Tax=cellular organisms RepID=A1ASR2_PELPD Length = 179 Score = 219 bits (557), Expect = 9e-56, Method: Composition-based stats. Identities = 68/162 (41%), Positives = 100/162 (61%), Gaps = 1/162 (0%) Query: 22 MKRHLLQD-IRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLF 80 M ++L Q RS +VY + GGCN C+IE+ +TP +D ERFGIK+V SPRHAD++L Sbjct: 1 MLKNLCQKVFGRSLWVYHANSGGCNGCDIEVLNVLTPYYDVERFGIKLVGSPRHADVMLC 60 Query: 81 TGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPG 140 G R+ RAY + P K+ + G+C GGGI+HD Y+V G + ++P++ ++PG Sbjct: 61 QGPAMRSTGKALQRAYAAMPGPKLVFAIGSCACGGGIWHDSYAVHGPVEKLIPVNYYVPG 120 Query: 141 CPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQ 182 CPP P A I G AVA GL+ +K V+++ + M P+ Sbjct: 121 CPPRPEAIIWGVAVAAGLVDKKTAPVEFKQVSDFPMPRYHPE 162 >UniRef50_B1ZSE5 NADH ubiquinone oxidoreductase 20 kDa subunit n=14 Tax=Bacteria RepID=B1ZSE5_OPITP Length = 279 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 68/150 (45%), Positives = 100/150 (66%), Gaps = 4/150 (2%) Query: 17 EQTQKMKRHLLQDI----RRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSP 72 E+T+ + R L I RS ++ VD G CN CE+EI A P++D ERFGI +V+SP Sbjct: 130 EKTEALGRELQNRIHSLLGRSLHIREVDAGSCNGCEVEINALSGPIYDLERFGIHLVASP 189 Query: 73 RHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIV 132 RHAD+LL TG VTR M + + Y++ P+ ++ V+ GACG GG+F Y+ G D+++ Sbjct: 190 RHADMLLVTGPVTRNMELALRKTYDATPEPRLVVAVGACGCSGGMFGRNYATCGSVDSVL 249 Query: 133 PIDVWIPGCPPTPAATIHGFAVALGLLQQK 162 P+DV+IPGCPP P A +HG +A+G L+++ Sbjct: 250 PVDVYIPGCPPNPFALLHGILLAVGRLEKR 279 >UniRef50_B6YU96 Membrane bound hydrogenase, NiFe-hydrogenase small subunit n=13 Tax=cellular organisms RepID=B6YU96_THEON Length = 175 Score = 217 bits (554), Expect = 2e-55, Method: Composition-based stats. Identities = 66/164 (40%), Positives = 94/164 (57%) Query: 3 PVLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAE 62 P + + E +K L + I RS +V+ V+ G CN C+IEI AA+TP +DAE Sbjct: 6 PADQNRTNGTTSEREMLEKRIAQLCRFIGRSPWVFHVNSGSCNGCDIEIIAALTPRYDAE 65 Query: 63 RFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLY 122 RFG+K+V SPRHAD+LL TG VT YE PD KI ++ G+C GG +F++ Sbjct: 66 RFGVKLVGSPRHADVLLVTGPVTDQSLERVKLVYEQTPDPKIVIAVGSCPTGGSVFYESP 125 Query: 123 SVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAV 166 I+P+DV++PGCPP P A ++G +AL L + + Sbjct: 126 FTNAPLSNIIPVDVYVPGCPPRPEAILYGVVLALEKLAKILKGE 169 >UniRef50_A3DKH2 NADH-quinone oxidoreductase, B subunit n=5 Tax=cellular organisms RepID=A3DKH2_STAMF Length = 165 Score = 217 bits (552), Expect = 3e-55, Method: Composition-based stats. Identities = 64/145 (44%), Positives = 90/145 (62%) Query: 17 EQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHAD 76 E + + IR + ++ + G CN C+IE+ AAITP++D ERFGIK+ S RHAD Sbjct: 14 ESPKDGGDSKYKIIRYTPWLIHFNTGACNGCDIEVLAAITPLYDPERFGIKLAPSIRHAD 73 Query: 77 ILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDV 136 IL+ TGAVT+ R YE PD K V+ GAC + GG+FH+ YSV G+D ++P+D+ Sbjct: 74 ILVVTGAVTKKAAERLKRLYEQMPDPKFVVAVGACAISGGVFHNSYSVLAGTDKVIPVDI 133 Query: 137 WIPGCPPTPAATIHGFAVALGLLQQ 161 ++PGCPP P A + G L L+ Sbjct: 134 YVPGCPPRPEAILDGIVKLLKRLES 158 >UniRef50_B9L8U0 Hydrogenase-4 component I n=2 Tax=Epsilonproteobacteria RepID=B9L8U0_NAUPA Length = 164 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 60/141 (42%), Positives = 85/141 (60%) Query: 28 QDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRA 87 + ++S ++ + GGCN C+IEI AA+ P +D ERFG+ +P+ +DILL TG VT+ Sbjct: 6 KFRKKSPWILHYNTGGCNGCDIEILAALAPKYDIERFGMLNRGNPKQSDILLVTGPVTKR 65 Query: 88 MRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAA 147 R R Y P+ K+ V+ GAC GGGIF D Y V G D I+P+DVWIPGC P A Sbjct: 66 CRDVLRRLYLEMPEPKVVVAMGACAHGGGIFRDFYHVENGVDNIIPVDVWIPGCAPRVEA 125 Query: 148 TIHGFAVALGLLQQKIHAVDY 168 I G A+ + ++K ++ Sbjct: 126 VIDGMVEAVKIWEKKTKEKEF 146 >UniRef50_B6IT61 Hydrogenase-4 component I n=4 Tax=Bacteria RepID=B6IT61_RHOCS Length = 196 Score = 209 bits (533), Expect = 5e-53, Method: Composition-based stats. Identities = 68/183 (37%), Positives = 96/183 (52%), Gaps = 5/183 (2%) Query: 7 QHVSQPITLDEQTQKMKRHL----LQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAE 62 + ++ P D + + R L + + RS + +VD G CNACE+EI A PV+D E Sbjct: 14 RTIAGPAPADATVEALARRLDTASRRRLGRSLAIRQVDAGSCNACEMEIHALNNPVYDLE 73 Query: 63 RFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLY 122 RFG V+SPRHAD+LL TG VT MR L+ +E+ PD K V+ G C + GG F D Y Sbjct: 74 RFGFSFVASPRHADVLLVTGPVTTNMREALLKTWEATPDPKWVVALGQCAIDGGPFADSY 133 Query: 123 SVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALG-LLQQKIHAVDYRDPTGVTMQPLWP 181 +V GG + +VP+D+ IPGCPP P + + + P G + P Sbjct: 134 AVVGGVEKVVPVDLMIPGCPPRPVDILAALVALIEAEARPPSRPAASGTPAGAPRERREP 193 Query: 182 QIP 184 + Sbjct: 194 TLD 196 >UniRef50_A6UVJ5 NADH ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=cellular organisms RepID=A6UVJ5_META3 Length = 246 Score = 209 bits (533), Expect = 6e-53, Method: Composition-based stats. Identities = 59/141 (41%), Positives = 85/141 (60%) Query: 14 TLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPR 73 TL E + + + +S Y+ V GGCNAC+ +I TPV+D RFGIK V+SPR Sbjct: 103 TLKEPDTSSLKSIKKLFGKSVYLREVCAGGCNACDADINVLNTPVYDLSRFGIKFVASPR 162 Query: 74 HADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVP 133 HAD L+ TG VT+ M + ++ Y++ P K ++ G C + GGIF + V GG D I+P Sbjct: 163 HADGLVITGPVTKNMELALMKTYDATPSPKFVIAVGTCAISGGIFRENEEVVGGVDKILP 222 Query: 134 IDVWIPGCPPTPAATIHGFAV 154 +D++IPGCPP P ++ F Sbjct: 223 VDLYIPGCPPHPFTNLYAFVK 243 >UniRef50_O21272 NADH-ubiquinone oxidoreductase 20 kDa subunit n=5 Tax=Eukaryota RepID=NDUS7_RECAM Length = 182 Score = 209 bits (533), Expect = 6e-53, Method: Composition-based stats. Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 7/145 (4%) Query: 21 KMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLF 80 KM + + S + G C +E+ + +D +RFGI SPR +D+++ Sbjct: 35 KMDELVNWARKGSLWPMTF---GLACCAVEMMHSAASRYDLDRFGIIFRPSPRQSDVMIV 91 Query: 81 TGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPG 140 G +T M + Y+ + + VS G+C GGG +H YSV G D IVP+D+++PG Sbjct: 92 AGTLTNKMAPALRKVYDQMSEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPG 151 Query: 141 CPPTPAATIHGFAVALGLLQQKIHA 165 CPPT A ++G LQ+KI Sbjct: 152 CPPTAEALLYGLL----QLQKKIKR 172 >UniRef50_B6GAA3 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GAA3_9ACTN Length = 228 Score = 209 bits (532), Expect = 7e-53, Method: Composition-based stats. Identities = 54/167 (32%), Positives = 83/167 (49%), Gaps = 1/167 (0%) Query: 32 RSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMP 91 +S ++ D CN C+IE+ ++ P++D ERFGI +P+HADI L TG+V Sbjct: 6 KSPWLIHYDGSSCNGCDIEVLDSMMPLYDIERFGIINTGNPKHADIFLVTGSVNAQNIEV 65 Query: 92 ALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHG 151 Y+ + K+ V+ G C GG+F D Y+V GG D +P+DV+ PGC P I Sbjct: 66 VRHIYDQMLEPKVVVACGICACTGGVFRDCYNVIGGVDKAIPVDVYAPGCAVRPETIIDA 125 Query: 152 FAVALGLLQQKIHAVDY-RDPTGVTMQPLWPQIPPSQRIAIEREARR 197 A+ +L +K + +DP + L P+ + E R Sbjct: 126 VLKAVEILDEKAKLMAAGKDPATAPRKGLLPRKGCAASCGAEETGRE 172 >UniRef50_B0TH78 NADH-quinone oxidoreductase subunit B n=5 Tax=Bacteria RepID=NUOB_HELMI Length = 175 Score = 209 bits (532), Expect = 7e-53, Method: Composition-based stats. Identities = 47/142 (33%), Positives = 68/142 (47%), Gaps = 4/142 (2%) Query: 20 QKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIK-VVSSPRHADIL 78 ++ S + G C IE+ A FD RFG + SPR AD++ Sbjct: 26 TSLEAVFNWARGNSLWPL---SSGLACCAIEMMATGASRFDMARFGYEVFRPSPRQADLI 82 Query: 79 LFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWI 138 + G +T M R YE P+ K ++ G+C GG F D Y+V G D ++P+DV++ Sbjct: 83 IIAGTLTWKMAPAIQRVYEQMPEPKWIIAMGSCACTGGPFADSYAVVPGVDKVIPVDVYV 142 Query: 139 PGCPPTPAATIHGFAVALGLLQ 160 PGCPP P A + GF +Q Sbjct: 143 PGCPPRPEALLDGFLKLKAKIQ 164 >UniRef50_C8W241 Hydrogenase, small subunit-like protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W241_DESAS Length = 236 Score = 209 bits (532), Expect = 8e-53, Method: Composition-based stats. Identities = 60/151 (39%), Positives = 95/151 (62%) Query: 9 VSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKV 68 ++ P + ++ + ++ + + RS ++ VD G CN C+ EI + PV+D +++G+ Sbjct: 86 LTAPASAEDLGRALREKIKKICHRSLHIRYVDAGACNGCDFEINSMTNPVYDIQQYGVDF 145 Query: 69 VSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGS 128 V+SPRHAD+LL TG VTR + + + YE+ P + V+ GAC GGG+F + Y+ GG Sbjct: 146 VASPRHADMLLVTGVVTRNLEIALHKTYEACPRPALVVAVGACACGGGVFKEAYASGGGV 205 Query: 129 DTIVPIDVWIPGCPPTPAATIHGFAVALGLL 159 D +P+DV++PGCPPTPA I G A+G L Sbjct: 206 DKFLPVDVYVPGCPPTPAQIIKGILTAIGRL 236 >UniRef50_A6L170 NADH-quinone oxidoreductase subunit B n=35 Tax=Bacteroidales RepID=NUOB_BACV8 Length = 198 Score = 209 bits (532), Expect = 8e-53, Method: Composition-based stats. Identities = 54/159 (33%), Positives = 79/159 (49%), Gaps = 8/159 (5%) Query: 27 LQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKV-VSSPRHADILLFTGAVT 85 L + RS ++ + + C IE A +D RFG +V +SPR AD+++ G +T Sbjct: 44 LINWGRSNSLWPL-TFATSCCGIEFMAVGAARYDFARFGFEVARASPRQADMIMVAGTIT 102 Query: 86 RAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTP 145 M R Y+ D K ++ G C + GG F Y V G D I+P+DV+IPGCPP P Sbjct: 103 HKMAPVLKRLYDQMADPKYVIAVGGCAISGGPFKKSYHVLNGVDKILPVDVYIPGCPPRP 162 Query: 146 AATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIP 184 A ++G LQ+K+ + GV + PQ P Sbjct: 163 EALLYGMI----QLQRKVKLEKFFG--GVNRKENEPQNP 195 >UniRef50_B3QY47 NADH-quinone oxidoreductase subunit B 2 n=8 Tax=Bacteria RepID=NUOB2_CHLT3 Length = 195 Score = 209 bits (531), Expect = 9e-53, Method: Composition-based stats. Identities = 54/154 (35%), Positives = 83/154 (53%), Gaps = 5/154 (3%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDH 102 G C IE+ A +D ERFGI SSPR +D+++ G VT M +R YE P+ Sbjct: 36 GLACCAIEMMATNASNYDLERFGIFPRSSPRQSDLMIVAGTVTFKMAERVVRLYEQMPEP 95 Query: 103 KICVSYGACGVGGGIFHD-LYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQ 161 + +S G+C GG + + Y V G D I+P+DV++PGCPP P A I G L+++ Sbjct: 96 RYVLSMGSCSNCGGPYWEHGYHVVKGVDRIIPVDVYVPGCPPRPEALIGGLMKVQELIRE 155 Query: 162 KIHAVDYRDPTGVTMQPLWPQIPPSQRIAIEREA 195 + A D R+ ++ L P+ ++ + +E A Sbjct: 156 EKFAGDRREA----IERLKPKKVKAEDVIVETSA 185 >UniRef50_A9KS72 NADH ubiquinone oxidoreductase 20 kDa subunit n=3 Tax=cellular organisms RepID=A9KS72_CLOPH Length = 144 Score = 208 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 55/144 (38%), Positives = 85/144 (59%) Query: 27 LQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTR 86 ++ +++S ++ D CN C+IE+ A +TP++D ERFGI +P+HADILL TG+V Sbjct: 1 MKFVKKSPWIIHYDGSSCNGCDIEVLACLTPLYDVERFGIINTGNPKHADILLITGSVNE 60 Query: 87 AMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPA 146 + YE + KI V+ G C GGIF + Y+V GG D ++P+DV++PGC P Sbjct: 61 QNIPVVKQIYEQMAEPKIVVAVGICANSGGIFAECYNVSGGVDKVLPVDVYVPGCAARPE 120 Query: 147 ATIHGFAVALGLLQQKIHAVDYRD 170 A I G L +L++K ++ Sbjct: 121 AIIDGVVKGLAILEEKQKYARKKN 144 >UniRef50_Q9DC70 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial n=57 Tax=cellular organisms RepID=NDUS7_MOUSE Length = 224 Score = 207 bits (527), Expect = 3e-52, Method: Composition-based stats. Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 2/157 (1%) Query: 12 PITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSS 71 P + E L+ RRS+ G C +E+ P +D +RFG+ +S Sbjct: 67 PRSRAEYVVTKLDDLINWARRSSLWPMTF--GLACCAVEMMHMAAPRYDMDRFGVVFRAS 124 Query: 72 PRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTI 131 PR AD+++ G +T M + Y+ P+ + VS G+C GGG +H YSV G D I Sbjct: 125 PRQADVMIVAGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRI 184 Query: 132 VPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDY 168 VP+D+++PGCPPT A ++G ++++ + Sbjct: 185 VPVDIYVPGCPPTAEALLYGILQLQRKIKREQKLKIW 221 >UniRef50_B5YKI3 NADH-quinone oxidoreductase subunit B 1 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=NUOB1_THEYD Length = 199 Score = 207 bits (527), Expect = 3e-52, Method: Composition-based stats. Identities = 52/177 (29%), Positives = 84/177 (47%), Gaps = 18/177 (10%) Query: 30 IRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMR 89 R + ++ + G C IE+ A +D +RFGI + ++PR AD+++ G VT+ M Sbjct: 37 WGRCSSLWPL-TFGLACCAIEMMATAASHYDLDRFGIIMRATPRQADVMIIAGTVTKKMA 95 Query: 90 MPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATI 149 + Y P+ + ++ G+C GGIF + YS G D I+P+DV+IPGCPP P A I Sbjct: 96 PVIVNLYHQMPEPRYVIAMGSCACSGGIF-NTYSTVQGVDEILPVDVYIPGCPPRPEALI 154 Query: 150 HGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIEREARRLAGYRQGRE 206 G LQ+KI + + + +++R Y R+ Sbjct: 155 EGLL----KLQEKIKT------------EPHKKTGCLSGVCLIDKSQRRCSYESCRD 195 >UniRef50_B6YTX0 Hydrogenase 4, component I or formate hydrogen lyase, subunit 7 n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YTX0_THEON Length = 273 Score = 207 bits (526), Expect = 3e-52, Method: Composition-based stats. Identities = 76/259 (29%), Positives = 121/259 (46%), Gaps = 43/259 (16%) Query: 32 RSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMP 91 RS +V+ ++ G CN C+IEI +TP +D ERFGIK+V SPRHA LL +G +TR Sbjct: 8 RSIWVFHLNTGSCNGCDIEIIDVLTPFYDVERFGIKLVGSPRHAHALLVSGPLTRQAYYG 67 Query: 92 ALRAYESA-PDHKICVSYGACGVGGGIFHDLYSVW---------------GGSDTIV--- 132 A ++ P+ ++ V+ G C GGIF++ Y V+ GG ++ Sbjct: 68 AKETIKAMPPEPRVIVAIGTCTCSGGIFYNGYPVYRRPESGREGSEYPRRGGIAELIADL 127 Query: 133 --------PIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRD---PTGVTMQPLWP 181 P+ ++IPGCPP P I+G A +GL+++K+ +Y D P + PL Sbjct: 128 RDEGEKVGPV-IYIPGCPPRPEEIIYGIAQLVGLVEKKLSYQEYSDELVPFKLPEGPLEE 186 Query: 182 QIPPSQRIAIEREARRLAGYRQGREICDRLLRHLSDDPTG----NRVNTWLRDAD----D 233 +I R+ + R L GY +I + + + + + ++D D Sbjct: 187 RI----RLTLMERLRHLVGYLDREKILEDFMGLVKEAEKSENPREELARLVKDYAAKCGD 242 Query: 234 PRLNSIVQQLFRVLRGLHD 252 RL + L R + D Sbjct: 243 VRLGFCMMLLEREYWRVKD 261 >UniRef50_B2IID4 NADH ubiquinone oxidoreductase 20 kDa subunit n=9 Tax=Bacteria RepID=B2IID4_BEII9 Length = 177 Score = 205 bits (523), Expect = 8e-52, Method: Composition-based stats. Identities = 59/157 (37%), Positives = 86/157 (54%), Gaps = 1/157 (0%) Query: 3 PVLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAE 62 P LT+ + ++ + RS + VD G CN CE+EI A +D E Sbjct: 12 PPLTEAGPTDGEIAALAAELDHLARSRLGRSLAIREVDAGSCNGCELEINALGNAFYDLE 71 Query: 63 RFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLY 122 RFG++ V+SPRHAD+LL TG VT MR LR Y++ P+ K V+ G C +G G+F + Y Sbjct: 72 RFGLRFVASPRHADVLLVTGPVTHNMREALLRTYDATPNPKWVVAAGTCALGEGVFAESY 131 Query: 123 SV-WGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGL 158 + GG ++ +D++IPGCPPTP + G + Sbjct: 132 ACQKGGVSAVIAVDLYIPGCPPTPTDLLKGLLALITK 168 >UniRef50_A6LXQ4 NADH-quinone oxidoreductase subunit B n=4 Tax=Bacteria RepID=NUOB_CLOB8 Length = 169 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 50/155 (32%), Positives = 76/155 (49%), Gaps = 4/155 (2%) Query: 6 TQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFG 65 + + + I + K+ L S + G C IE+ AA +D RFG Sbjct: 8 DKEIQEQIEKNIILTKLDDTLNYFRAHSFWPL---TFGLACCAIEMMAAGGARYDIARFG 64 Query: 66 IK-VVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSV 124 + +SPR AD+++ G +T M + Y+ P+ K ++ G+C GG F D Y+V Sbjct: 65 YEVFRASPRQADLMIVAGTITEKMAPIVKKIYDQMPEPKWVIAMGSCATSGGPFVDSYNV 124 Query: 125 WGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLL 159 G+DT +P+DV+IPGCPP P A IHG + Sbjct: 125 VPGADTFLPVDVYIPGCPPRPEALIHGLLTLKEKI 159 >UniRef50_C7NUN9 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Halorhabdus utahensis DSM 12940 RepID=C7NUN9_HALUD Length = 183 Score = 205 bits (521), Expect = 1e-51, Method: Composition-based stats. Identities = 56/146 (38%), Positives = 84/146 (57%) Query: 22 MKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFT 81 M R + RS ++ ++CG CN C+IE A+ P +D ERFGI+ +PRHAD+L+ T Sbjct: 1 MGRIIDWARNRSPWILHMNCGSCNGCDIETLDALMPRYDVERFGIQQKDTPRHADVLVAT 60 Query: 82 GAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGC 141 G VT+ M R YE P+ K+ ++ G+C GG+F D Y+ G D ++P+D+++PGC Sbjct: 61 GPVTKQMAPRLERIYEQMPEPKLVIAAGSCAATGGVFQDCYNCHEGIDDVIPVDMYVPGC 120 Query: 142 PPTPAATIHGFAVALGLLQQKIHAVD 167 P +P I G L Q+ A Sbjct: 121 PISPETLIDGIVALLEEAGQEAKAER 146 >UniRef50_B8J1E3 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J1E3_DESDA Length = 185 Score = 205 bits (521), Expect = 1e-51, Method: Composition-based stats. Identities = 59/142 (41%), Positives = 89/142 (62%) Query: 22 MKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFT 81 + + + + +S ++ DCG CN C+IE+ A +TP++D ERFG+ +P+HAD+LL T Sbjct: 4 VDKMIKRSRLKSPWIVHFDCGSCNGCDIEVLACLTPMYDVERFGVVNAGNPKHADVLLVT 63 Query: 82 GAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGC 141 G V R + YE P K +S GAC + GG+F D Y+V G+ ++P+DV++PGC Sbjct: 64 GTVNHRNRHVLKQIYEQMPSPKAVISLGACNLSGGVFKDTYNVLNGAHNVIPVDVFVPGC 123 Query: 142 PPTPAATIHGFAVALGLLQQKI 163 PP P A I G ALG+L+ K+ Sbjct: 124 PPKPEAIIDGVVEALGVLKAKM 145 >UniRef50_C6PUG1 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PUG1_9CLOT Length = 242 Score = 205 bits (521), Expect = 1e-51, Method: Composition-based stats. Identities = 52/150 (34%), Positives = 86/150 (57%) Query: 13 ITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSP 72 +++ Q++K + +RS + VD G CN C +E+ +D R+GIK +SP Sbjct: 93 ASIEILGQEVKEKIYSKFKRSLVLRSVDTGSCNGCMMEVSNTQNTYYDLSRYGIKFAASP 152 Query: 73 RHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIV 132 RHAD ++ TG VT M+ ++ Y++ D KI ++ G+C GGIF D YSV + I+ Sbjct: 153 RHADGIVVTGPVTLNMKEALIKTYDAISDPKIVIAVGSCAYSGGIFKDGYSVCEDLNEIL 212 Query: 133 PIDVWIPGCPPTPAATIHGFAVALGLLQQK 162 +++ IPGCPP+P A ++G + L ++ Sbjct: 213 KVNLVIPGCPPSPQAILYGMLKIINKLDEE 242 >UniRef50_B2A054 NADH ubiquinone oxidoreductase 20 kDa subunit n=54 Tax=cellular organisms RepID=B2A054_OPITP Length = 338 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 55/140 (39%), Positives = 81/140 (57%) Query: 29 DIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAM 88 +R+S ++ D CN C+IE A +TP++D ER G+ +P+HADI L TGAV Sbjct: 3 GLRKSPWIIHYDASSCNGCDIETLACLTPLYDVERLGVINTGNPKHADIFLVTGAVNEQS 62 Query: 89 RMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAAT 148 + Y P+ K+ V+ G C GGIF D Y++ GG D ++P+DV++PGC P A Sbjct: 63 KEVIRNIYHQLPEPKVVVAIGVCASSGGIFRDCYNIAGGVDRVIPVDVYVPGCAARPEAI 122 Query: 149 IHGFAVALGLLQQKIHAVDY 168 I G ALG+L++K + Sbjct: 123 IDGVVQALGVLERKQSEMSA 142 >UniRef50_Q8DKZ4 NAD(P)H-quinone oxidoreductase subunit K n=21 Tax=cellular organisms RepID=NDHK_THEEB Length = 237 Score = 203 bits (516), Expect = 5e-51, Method: Composition-based stats. Identities = 52/161 (32%), Positives = 81/161 (50%), Gaps = 3/161 (1%) Query: 2 SPVLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRV--DCGGCNACEIEIFAAITPVF 59 SP + +++P E + + L D+ A + + G C IE A I F Sbjct: 6 SPAILNPIARPEVPQELAENIILTSLNDVYDWARLSSLWPLMYGTACCFIEFAAMIGSRF 65 Query: 60 DAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIF- 118 D +RFG+ +SPR AD+++ +G +T M +R YE P K ++ GAC + GG+F Sbjct: 66 DFDRFGLVPRNSPRQADLIITSGTITMKMAPALVRLYEQMPSPKYVIAMGACTITGGMFS 125 Query: 119 HDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLL 159 D YS G D ++P+DV++PGCPP P A + + Sbjct: 126 SDSYSAVRGVDKLIPVDVYLPGCPPRPEAIMDAIVKLRKKI 166 >UniRef50_O75251 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial n=638 Tax=cellular organisms RepID=NDUS7_HUMAN Length = 213 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 54/166 (32%), Positives = 81/166 (48%), Gaps = 6/166 (3%) Query: 3 PVLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAE 62 P +P + E L+ RRS+ G C +E+ P +D + Sbjct: 47 PKARAVAPKPSSRGEYVVAKLDDLVNWARRSSLWPMTF--GLACCAVEMMHMAAPRYDMD 104 Query: 63 RFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLY 122 RFG+ +SPR +D+++ G +T M + Y+ P+ + VS G+C GGG +H Y Sbjct: 105 RFGVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSY 164 Query: 123 SVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDY 168 SV G D IVP+D++IPGCPPT A ++G LQ+KI Sbjct: 165 SVVRGCDRIVPVDIYIPGCPPTAEALLYGIL----QLQRKIKRERR 206 >UniRef50_Q1AVI4 NADH-quinone oxidoreductase subunit B n=15 Tax=Bacteria RepID=NUOB_RUBXD Length = 251 Score = 202 bits (513), Expect = 1e-50, Method: Composition-based stats. Identities = 56/196 (28%), Positives = 89/196 (45%), Gaps = 8/196 (4%) Query: 5 LTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERF 64 L Q +P + T K+ + S + + G C IE+ + D ERF Sbjct: 3 LMQKFDEPNIITTSTDKL---FNWARKNSLWPLQF---GLACCAIEMMSTGMAHNDLERF 56 Query: 65 GIKVVS-SPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYS 123 G + SPR AD+++ +G V+ M R YE P+ K ++ GAC + GG F D YS Sbjct: 57 GAGFFAGSPRQADVMIVSGTVSTKMAERMTRLYEQMPEPKWVIAMGACAISGGPFLDGYS 116 Query: 124 VWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRD-PTGVTMQPLWPQ 182 V G+D ++P+DV++PGCPP P A I G ++++ + P V + + Sbjct: 117 VLMGADRVIPVDVYVPGCPPRPEALIFGIMTLQKKIEREQQVGYEKPRPALVDEEGNIRE 176 Query: 183 IPPSQRIAIEREARRL 198 P + E + Sbjct: 177 YLPEREYRQISEGKAH 192 >UniRef50_Q0BSK3 NADH-quinone oxidoreductase subunit B n=31 Tax=cellular organisms RepID=NUOB_GRABC Length = 194 Score = 201 bits (512), Expect = 1e-50, Method: Composition-based stats. Identities = 46/135 (34%), Positives = 76/135 (56%), Gaps = 1/135 (0%) Query: 27 LQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTR 86 L + R+ ++ + G C +E+ A P +D +RFG+ +SPR +D+++ G +T Sbjct: 54 LVNWARTGSLWPM-TFGLACCAVEMIHAYMPRYDLDRFGVIPRASPRQSDVMIVAGTLTN 112 Query: 87 AMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPA 146 M R Y+ P+ + +S G+C GGG +H YSV G D IVP+DV++PGCPPT Sbjct: 113 KMAPALRRVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAE 172 Query: 147 ATIHGFAVALGLLQQ 161 A ++G +++ Sbjct: 173 ALVYGIMQLQKKIRR 187 >UniRef50_A7I7C9 NADH ubiquinone oxidoreductase, 20 kDa subunit n=9 Tax=cellular organisms RepID=A7I7C9_METB6 Length = 172 Score = 199 bits (507), Expect = 5e-50, Method: Composition-based stats. Identities = 61/168 (36%), Positives = 93/168 (55%), Gaps = 5/168 (2%) Query: 1 MSPVLTQHVSQPITL-DEQTQKMKRHLLQ----DIRRSAYVYRVDCGGCNACEIEIFAAI 55 +S +L + V+ P+ + DE+ +++ R + + RS + +D G NA EIEI Sbjct: 5 VSCMLGKKVTGPLPVRDEELERIGREIRREINARFGRSLAIRELDAGSDNAAEIEINNLS 64 Query: 56 TPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGG 115 +D ERFGI V+SPRHAD+LL TGA+T M + A + Y++ P K V+ G G Sbjct: 65 NAYYDVERFGISFVASPRHADVLLVTGAITCNMAIAAQKTYDAMPSPKFVVAVGDDACDG 124 Query: 116 GIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKI 163 GI+ Y+V GG+D I P+D+ IPG PP P + G + ++ Sbjct: 125 GIYKGTYAVLGGADAIFPVDLKIPGNPPAPIQILTGLLALMRSAGKRT 172 >UniRef50_A5UXK1 NADH-quinone oxidoreductase subunit B 1 n=13 Tax=Bacteria RepID=NUOB1_ROSS1 Length = 268 Score = 199 bits (507), Expect = 6e-50, Method: Composition-based stats. Identities = 49/140 (35%), Positives = 72/140 (51%), Gaps = 3/140 (2%) Query: 24 RHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIK-VVSSPRHADILLFTG 82 + RRS ++ + G C IE+ A FD RFG + +SPR AD+++ G Sbjct: 22 QRFYNWGRRS-SIWPLSFG-LACCAIEMMATGLARFDLARFGAEMFRASPRQADLMIVAG 79 Query: 83 AVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCP 142 VT+ M +R Y P+ + +S GAC GG F D Y+V G D ++P+DV+IPGCP Sbjct: 80 TVTKKMAPQVVRLYNQMPEPRYVISMGACATSGGPFRDGYNVLRGIDLLIPVDVYIPGCP 139 Query: 143 PTPAATIHGFAVALGLLQQK 162 P P A +H + + Sbjct: 140 PRPEALLHALMTLQKQIDAQ 159 >UniRef50_D2R6Y4 NADH-quinone oxidoreductase, B subunit n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R6Y4_9PLAN Length = 227 Score = 199 bits (506), Expect = 9e-50, Method: Composition-based stats. Identities = 54/190 (28%), Positives = 82/190 (43%), Gaps = 4/190 (2%) Query: 4 VLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAER 63 +L ++E + R + ++ + G C IE+ AA +D +R Sbjct: 19 MLASQPWIEARVEENVFTTSVEQAINWARQSSIWPM-TFGLACCAIEMMAAGASRYDMDR 77 Query: 64 FGI-KVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGI-FHDL 121 FG ++PR AD+++ G VT M R Y PD K ++ GAC VGGG F Sbjct: 78 FGAGAFRATPRQADLMIVAGTVTYKMASRVRRLYNMMPDPKFVIAMGACTVGGGPYFKWG 137 Query: 122 YSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQ-KIHAVDYRDPTGVTMQPLW 180 Y V G D +VP+DV+IPGCPP P A + G ++ +I +T+ Sbjct: 138 YHVVKGVDLVVPVDVYIPGCPPRPEALLEGLMRIQDKIKGHRIAKKKSTGSGFLTVGEKV 197 Query: 181 PQIPPSQRIA 190 P + Sbjct: 198 EDELPIPHHS 207 >UniRef50_A1RWL1 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWL1_THEPD Length = 245 Score = 197 bits (502), Expect = 2e-49, Method: Composition-based stats. Identities = 90/232 (38%), Positives = 123/232 (53%), Gaps = 17/232 (7%) Query: 23 KRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTG 82 K+ ++RS Y+ RVD G CN C+IE+F A+TP FD ER G+K+V SPR AD++L TG Sbjct: 6 KQKAYDALKRSVYLLRVDSGSCNGCDIEVFDALTPYFDVERLGVKLVLSPRMADVILVTG 65 Query: 83 AVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCP 142 VTR YE+AP + V+ GAC GGGI++D Y GG D ++P+DV+IPGCP Sbjct: 66 PVTRQFLPVLKATYEAAPKPCVVVACGACACGGGIWYDTYGTAGGVDKVIPVDVYIPGCP 125 Query: 143 PTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQR--------IAIERE 194 P P A +HG AVAL +L+QK+ R T + P +P + A++ E Sbjct: 126 PRPHAILHGVAVALDILEQKVK----RSETKADAESFKPALPSLEGAINSWELYRALKLE 181 Query: 195 ARRLAGYRQGREICDRLLRHLS-----DDPTGNRVNTWLRDADDPRLNSIVQ 241 + GYR G + LLR DD D R+ V+ Sbjct: 182 LYKHLGYRIGYRVLCDLLRISKGSKDLDDFAAKAEKAVSEKYHDARITEAVR 233 >UniRef50_C5GDP9 NADH-ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=Ajellomyces dermatitidis RepID=C5GDP9_AJEDR Length = 245 Score = 197 bits (501), Expect = 3e-49, Method: Composition-based stats. Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 6/161 (3%) Query: 4 VLTQHVSQPITLDEQTQKMKRHL-----LQDIRRSAYVYRVDCGGCNACEIEIFAAITPV 58 + + S + DE+T M L + + R A ++ + G C +E+ A P Sbjct: 73 RMERSSSLLPSQDEKTGTMGHFLGSIDAVANWGRQASLWPISLG-LACCGLEMMAVSMPR 131 Query: 59 FDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIF 118 +D +R G +SPR +D+L+ G VT M Y+ PD K +S G+C GGG + Sbjct: 132 YDQDRLGTIFRASPRQSDLLIVAGTVTNKMAPALRLVYDQMPDPKWVISMGSCANGGGYY 191 Query: 119 HDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLL 159 H YSV G D ++P+DV++PGCPPT A ++ +V L Sbjct: 192 HYSYSVVRGVDRLLPVDVYLPGCPPTAEALMYAISVVRRKL 232 >UniRef50_B8HLE8 NAD(P)H-quinone oxidoreductase subunit K 2 n=94 Tax=cellular organisms RepID=NDHK2_CYAP4 Length = 259 Score = 197 bits (501), Expect = 3e-49, Method: Composition-based stats. Identities = 60/183 (32%), Positives = 93/183 (50%), Gaps = 11/183 (6%) Query: 1 MSPVLTQHVSQPITLDEQTQKMKRHL----LQDIRRSAYVYRVD--CGGCNACEIEIFAA 54 MS L + PI+ E ++ ++ L DI A + + G C IE A Sbjct: 1 MSTPLDHSIRNPISSAEVPPELSENIILTSLDDIYNWARISSIYPLMYGTACCFIEFAAM 60 Query: 55 ITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVG 114 I FD ERFG+ +SPR AD+++ G +T M +P R Y+ P+ K ++ GAC + Sbjct: 61 IASRFDMERFGMFPRASPRQADLIILAGTLTMQMAVPTRRLYDQMPEPKYVIAMGACMIT 120 Query: 115 GGIF-HDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTG 173 GG+F D + G+D ++PIDV+IPGCPP P A + A+ L++KI ++ Sbjct: 121 GGMFSADSPTALRGADKLLPIDVYIPGCPPRPEAILD----AVTKLRKKIANESPQERQN 176 Query: 174 VTM 176 + Sbjct: 177 LQQ 179 >UniRef50_B2V8R1 NADH ubiquinone oxidoreductase 20 kDa subunit n=3 Tax=Aquificales RepID=B2V8R1_SULSY Length = 173 Score = 197 bits (500), Expect = 3e-49, Method: Composition-based stats. Identities = 60/147 (40%), Positives = 84/147 (57%), Gaps = 4/147 (2%) Query: 16 DEQTQKMKRHLLQDIRR----SAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSS 71 DE + + + L + I + S + VD G CNACE EI A P +D ERFG+K V+S Sbjct: 22 DENVEILGKQLKEKIDKYFQGSFAIREVDSGSCNACEYEISALSNPYYDIERFGVKFVAS 81 Query: 72 PRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTI 131 P+HAD ++ TG +TR M ++AYE+ P+ K ++ G C + GG F Y+V G Sbjct: 82 PKHADAIMITGCLTRNMYEAVMKAYENVPNPKFIIAVGDCALDGGTFKGSYAVMDGIKDK 141 Query: 132 VPIDVWIPGCPPTPAATIHGFAVALGL 158 +PID+WI GCPP P I G + L Sbjct: 142 LPIDIWIKGCPPEPIDIISGLLILLNK 168 >UniRef50_D0L1N9 NADH ubiquinone oxidoreductase 20 kDa subunit n=3 Tax=Proteobacteria RepID=D0L1N9_HALNC Length = 274 Score = 196 bits (498), Expect = 7e-49, Method: Composition-based stats. Identities = 62/164 (37%), Positives = 90/164 (54%) Query: 4 VLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAER 63 +++P T D++ ++ + L RS ++ VD G CN CE EI A + P ++ R Sbjct: 108 ADLSRLARPATPDKKLEEKWQKSLAGFGRSLHIRHVDAGSCNGCESEISALLNPFYNLHR 167 Query: 64 FGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYS 123 G+ SPR AD+LL TG VT MR P LR +E+ P+ + ++ G C GGG Y+ Sbjct: 168 LGVFFTPSPRFADLLLVTGPVTEVMREPLLRTFEAMPEPRWVMALGTCATGGGTNGGGYA 227 Query: 124 VWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVD 167 G D I+P+D+W+PGCPP PAA I V L Q++H Sbjct: 228 CHQGLDGILPVDIWLPGCPPNPAAIIEALLVLLDRRPQQVHGGR 271 >UniRef50_B4U8H3 NADH-quinone oxidoreductase subunit B n=4 Tax=Bacteria RepID=NUOB_HYDS0 Length = 177 Score = 196 bits (498), Expect = 7e-49, Method: Composition-based stats. Identities = 51/165 (30%), Positives = 76/165 (46%), Gaps = 5/165 (3%) Query: 19 TQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADIL 78 T + L R + + + G C IE+ A FD +R G+ +SPR AD+L Sbjct: 12 TTTVDELLSWGRRNALWPVTI---GLACCAIEMMHAAASRFDIDRLGMIFRASPRQADVL 68 Query: 79 LFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWI 138 + G V + ++ P+ K C+S G C GG F YS G D I+P+DV+I Sbjct: 69 IVAGTVVNKVAPMLKLVWDQMPEPKWCISMGGCASAGGPFP-TYSTLQGIDRIIPVDVYI 127 Query: 139 PGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQI 183 PGCPPTP I+G +++K Y + L P++ Sbjct: 128 PGCPPTPQGLIYGLLELQRKIREK-KVTRYEKAFEEFKKDLSPEL 171 >UniRef50_C1ZCK3 NADH dehydrogenase subunit B n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZCK3_PLALI Length = 225 Score = 195 bits (497), Expect = 8e-49, Method: Composition-based stats. Identities = 50/141 (35%), Positives = 69/141 (48%), Gaps = 6/141 (4%) Query: 43 GCNACEIEIFAAITPVFDAERFGI-KVVSSPRHADILLFTGAVTRAMRMPALRAYESAPD 101 G C +E+ A +D +RFG ++PR AD+++ G VT M R Y+ PD Sbjct: 59 GIACCAMEMMATGMSKYDLDRFGSGAFRATPRQADLMIVAGTVTYKMASRIRRLYDQMPD 118 Query: 102 HKICVSYGACGVGGGI-FHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQ 160 K ++ GAC +GGG F Y V G D +VP+DV+IPGCPP P A + G +Q Sbjct: 119 PKYVIAMGACTIGGGPYFKYGYHVVKGVDLVVPVDVYIPGCPPRPEALLEGVM----RIQ 174 Query: 161 QKIHAVDYRDPTGVTMQPLWP 181 KI A T + Sbjct: 175 DKIRARKLGRNTVSQLPVPHR 195 >UniRef50_A5TDF9 NADH-quinone oxidoreductase, B subunit n=2 Tax=pseudomallei group RepID=A5TDF9_BURMA Length = 293 Score = 195 bits (497), Expect = 9e-49, Method: Composition-based stats. Identities = 47/154 (30%), Positives = 77/154 (50%), Gaps = 6/154 (3%) Query: 12 PITLDEQ---TQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKV 68 P+TL++ + + + S + G C +E+ A +D +RFG+ Sbjct: 131 PLTLEKDGFIVTTLDAAMAAAQKNSLWYMTF---GLACCAVEMMHAAGARYDMDRFGMIP 187 Query: 69 VSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGS 128 +SPR D+++ G +T M R Y+ + + VS G+C GGG +H YSV G Sbjct: 188 RASPRQCDLMIVAGTLTNKMAPAMRRVYDQMAEPRYVVSMGSCANGGGYYHYSYSVVRGC 247 Query: 129 DTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQK 162 D IVP+DV++PGCPPT A ++G + ++ Sbjct: 248 DRIVPVDVYVPGCPPTAEALVYGLMQLQRKVAER 281 >UniRef50_B1W4V9 NADH-quinone oxidoreductase subunit B 2 n=27 Tax=Bacteria RepID=NUOB2_STRGG Length = 235 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 61/187 (32%), Positives = 81/187 (43%), Gaps = 14/187 (7%) Query: 2 SPVLTQHVSQPIT------LDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAI 55 SP V P + MK L R S +V+ G C IE AA Sbjct: 16 SPPPADPVLLPEPKRLGVLSRLAPEPMKVVLNWGRRYSLWVFNF---GLACCAIEFIAAS 72 Query: 56 TPVFDAERFGIKVVS-SPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVG 114 D R G+ + PR AD+++ +G VT M R YE P+ K +S+GAC Sbjct: 73 MARHDFIRLGVIPFAPGPRQADLMIVSGTVTDKMAPAVKRLYEQMPEPKYVISFGACSNC 132 Query: 115 GGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGV 174 GG + D YSV G D I+P+DV++PGCPP P A + G LQ+KI + Sbjct: 133 GGPYWDSYSVTKGVDQIIPVDVYVPGCPPRPEALLQGIL----KLQEKIARESLAERYAT 188 Query: 175 TMQPLWP 181 P Sbjct: 189 GATGGGP 195 >UniRef50_A8M069 NADH-quinone oxidoreductase subunit B 1 n=6 Tax=Actinomycetales RepID=NUOB1_SALAI Length = 188 Score = 195 bits (495), Expect = 1e-48, Method: Composition-based stats. Identities = 53/179 (29%), Positives = 80/179 (44%), Gaps = 7/179 (3%) Query: 20 QKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVS-SPRHADIL 78 + ++ L R S +V+ G C IE A D R G+ + PR AD++ Sbjct: 9 EPIRFVLNWGRRYSLWVFNF---GLACCAIEFIATSMSRHDFMRLGVIPFAHGPRQADLM 65 Query: 79 LFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWI 138 + +G VT M R Y+ P+ K +S+GAC GG + D YSV G D ++P+DV++ Sbjct: 66 VVSGTVTDKMAPAIKRLYDQMPEPKYVISFGACSNCGGPYWDSYSVTKGVDQLIPVDVYV 125 Query: 139 PGCPPTPAATIHGFAVALGLLQQK---IHAVDYRDPTGVTMQPLWPQIPPSQRIAIERE 194 PGCPP P A +HG + + + V D P+ S + R Sbjct: 126 PGCPPRPEALLHGILRLQEKIAAEGAGVGGVSRPDALASPTGGAAPRSADSLTAPLVRP 184 >UniRef50_Q39SF9 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39SF9_GEOMG Length = 244 Score = 194 bits (493), Expect = 3e-48, Method: Composition-based stats. Identities = 65/160 (40%), Positives = 85/160 (53%), Gaps = 9/160 (5%) Query: 1 MSPVLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFD 60 + P H ++P+ D L + RS V GGCNACE + T +D Sbjct: 93 VHPGSEHHHARPLPPD---------LRRLFGRSLKFREVSAGGCNACEADTNVLSTIGWD 143 Query: 61 AERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHD 120 RFGI+ V+SPRHAD L TG VT M L YE+ PD KI V+ GAC + GG + D Sbjct: 144 LGRFGIQFVASPRHADGLWVTGPVTEHMAKALLTTYEAIPDPKIVVACGACAINGGPYID 203 Query: 121 LYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQ 160 V G D+IVP+D++IPGCPP PA + G L ++ Sbjct: 204 TPQVCNGVDSIVPVDLYIPGCPPHPATILDGLLRILNKIK 243 >UniRef50_Q3ZXS0 NADH-quinone oxidoreductase subunit B n=5 Tax=Dehalococcoides RepID=NUOB_DEHSC Length = 200 Score = 194 bits (492), Expect = 4e-48, Method: Composition-based stats. Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 4/144 (2%) Query: 19 TQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGI-KVVSSPRHADI 77 +++ L S + G C IE+ +D RFG+ +SPR AD+ Sbjct: 54 ITSVEKVLNWSRHYSLWPVMF---GLACCAIEMMCMAASRWDLARFGMDIFRASPRQADL 110 Query: 78 LLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVW 137 ++ G +T M R Y+ P+ K ++ GACG GG+F D YSV G + +VP+DV+ Sbjct: 111 MIVAGTLTWKMAPWLKRIYDQMPEPKWVLAMGACGTSGGLFRDSYSVVPGFNLVVPVDVY 170 Query: 138 IPGCPPTPAATIHGFAVALGLLQQ 161 +PGCPP P A + + + Sbjct: 171 VPGCPPRPEALMRAIMDIHEKIDK 194 >UniRef50_Q1IL91 NADH-quinone oxidoreductase subunit B 2 n=4 Tax=Bacteria RepID=NUOB2_ACIBL Length = 202 Score = 193 bits (491), Expect = 4e-48, Method: Composition-based stats. Identities = 49/151 (32%), Positives = 72/151 (47%), Gaps = 6/151 (3%) Query: 29 DIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIK-VVSSPRHADILLFTGAVTRA 87 + R + V+ + G C IE+ A T +D RFG + SPR +D+++ G VT Sbjct: 22 NWARKSSVWPM-TFGLACCAIEMITASTARYDIARFGSEVFRPSPRQSDLMIVAGTVTLK 80 Query: 88 MRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAA 147 M R YE P+ K ++ GAC GG F + Y+ G D IVP+DV++ GCPP P Sbjct: 81 MAPVVQRIYEQMPEPKWVMAMGACASVGGPF-NTYATLQGVDKIVPVDVYVVGCPPRPEN 139 Query: 148 TIHGFAVALGLLQQKIHAVDYRDPTGVTMQP 178 +G + H + PT V + Sbjct: 140 LFYGLLKLQDKID---HMTLAKRPTDVRLDE 167 >UniRef50_B6YR59 NADH-quinone oxidoreductase subunit B n=5 Tax=Bacteroidales RepID=NUOB_AZOPC Length = 191 Score = 193 bits (490), Expect = 5e-48, Method: Composition-based stats. Identities = 47/143 (32%), Positives = 70/143 (48%), Gaps = 6/143 (4%) Query: 27 LQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKV-VSSPRHADILLFTGAVT 85 L + RS V+ + + C IE +D RFG +V +SPR AD++ G + Sbjct: 34 LINWGRSNSVWPL-TFATSCCGIEFMCLGAARYDFARFGWEVTRNSPRQADVVFCCGTIV 92 Query: 86 RAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTP 145 M R Y+ + K ++ G+C + GG F Y G D I+P+DV+IPGCPP P Sbjct: 93 HKMAPVLKRLYDQMSEPKYVIALGSCAISGGPFKSSYHTIMGIDKIIPVDVYIPGCPPRP 152 Query: 146 AATIHGFAVALGLLQQKIHAVDY 168 A I+G L +KI ++ Sbjct: 153 DAMIYGMI----QLARKIKVQNF 171 >UniRef50_A9A345 NADH-quinone oxidoreductase, B subunit n=1 Tax=Nitrosopumilus maritimus SCM1 RepID=A9A345_NITMS Length = 174 Score = 193 bits (490), Expect = 5e-48, Method: Composition-based stats. Identities = 49/153 (32%), Positives = 78/153 (50%), Gaps = 8/153 (5%) Query: 19 TQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGI-KVVSSPRHADI 77 + + + S + ++ C +E AA +P +D ERFGI + S R D+ Sbjct: 27 DKPLGYAINWGRIWSLWPVHIET---ACCSVEFGAASSPRYDVERFGIIEAFGSLRQCDL 83 Query: 78 LLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVW 137 ++ G +TR M Y+ P+ K ++ GAC + GG++ D Y+V G D ++P+DV+ Sbjct: 84 VVVQGTITRKMAPRLRLVYDQMPEPKYVIAMGACAITGGLYFDSYNVLPGIDGVIPVDVY 143 Query: 138 IPGCPPTPAATIHGFAVALGLLQQKIHAVDYRD 170 +PGCPP P I G LLQ+KI + R Sbjct: 144 VPGCPPRPETLIQGCI----LLQEKIKRMKARK 172 >UniRef50_Q12F15 NADH ubiquinone oxidoreductase, 20 kDa subunit n=15 Tax=Proteobacteria RepID=Q12F15_POLSJ Length = 181 Score = 192 bits (489), Expect = 7e-48, Method: Composition-based stats. Identities = 57/142 (40%), Positives = 84/142 (59%) Query: 19 TQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADIL 78 +++ R +L + ++ + VD G CN CE+EI A P ++ E GIK V+SPRHAD+L Sbjct: 29 IERIHRDILLILGQALTIRAVDAGSCNGCELEIHALNNPYYNIEGLGIKFVASPRHADML 88 Query: 79 LFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWI 138 L TG V+R M R Y++ P+ K+ V+ G CG GGIF D Y+ G ++P+DV + Sbjct: 89 LVTGPVSRHMDEALRRTYDATPEPKLVVAVGDCGCTGGIFGDSYASCGRVANVIPVDVTV 148 Query: 139 PGCPPTPAATIHGFAVALGLLQ 160 PGCPP P + G A+ + Sbjct: 149 PGCPPPPIEILRGILTAVRQRR 170 >UniRef50_A8MBS9 NADH-quinone oxidoreductase, B subunit n=5 Tax=Thermoproteaceae RepID=A8MBS9_CALMQ Length = 374 Score = 192 bits (488), Expect = 9e-48, Method: Composition-based stats. Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 16/212 (7%) Query: 28 QDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRA 87 + S + + C +E A P +DAER+G + PR + ++ G VTR Sbjct: 30 WGTKFSIWPAHLVT---ACCGVEFAHASAPGYDAERWGFLPIFGPRQTNSIVIEGTVTRK 86 Query: 88 MRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAA 147 M AYE P K ++ G+C + GG+F + Y V + IVP+D W+ GCPPTP A Sbjct: 87 MARIVKTAYEQMPYPKFVIAMGSCAMEGGVFWNSYHVVR-VNEIVPVDAWVMGCPPTPEA 145 Query: 148 TIHGFAVALGLLQ-QKIHAVDYRDPTGVT--MQPLWPQIPPSQRIAIEREARRLAG---- 200 I + ++ +++ +P ++ ++P PQ PP+ IE E + Sbjct: 146 VIRAIRMVQSKIEGKEVKPNIRPNPVDLSKVLKPDKPQRPPNPPHRIEFELIKDINVCKP 205 Query: 201 -----YRQGREICDRLLRHLSDDPTGNRVNTW 227 + G+++ D L D V Sbjct: 206 AANVKWELGQKLIDGFKESLKDGVKNTAVRGV 237 >UniRef50_A4EBM2 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBM2_9ACTN Length = 195 Score = 192 bits (488), Expect = 9e-48, Method: Composition-based stats. Identities = 55/134 (41%), Positives = 75/134 (55%) Query: 29 DIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAM 88 + RS +V D CN C+IE+ A++TP+FDAERFG+ +P+HADI L TG+V Sbjct: 4 KMSRSPWVIHYDGSSCNGCDIEVLASLTPLFDAERFGVVNTGNPKHADIFLVTGSVNAQN 63 Query: 89 RMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAAT 148 + Y + K V+ G C GG+F D Y+V GG D +P+DV+ PGC P Sbjct: 64 LPVVRQIYNQMLEPKCVVACGICACSGGVFRDAYNVIGGVDRAIPVDVYAPGCAIRPETV 123 Query: 149 IHGFAVALGLLQQK 162 I A G+L QK Sbjct: 124 IDAIVEACGILDQK 137 >UniRef50_Q1IPE7 NADH-quinone oxidoreductase subunit B 1 n=10 Tax=Bacteria RepID=NUOB1_ACIBL Length = 213 Score = 192 bits (488), Expect = 9e-48, Method: Composition-based stats. Identities = 47/164 (28%), Positives = 79/164 (48%), Gaps = 9/164 (5%) Query: 19 TQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIK-VVSSPRHADI 77 + + + S + G C IE+ + FD RFG + SPR +D+ Sbjct: 58 LTTLDNAVNWIRKNSIWPMTF---GLACCAIEMMSMGASRFDIARFGAEVFRPSPRQSDL 114 Query: 78 LLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVW 137 ++ G V++ M Y P+ K +S GAC GG+F + Y++ G + +P+D++ Sbjct: 115 MIIAGRVSQKMAPVIRHLYLQMPEPKWVISMGACATSGGVF-NNYALVQGVNQYIPVDIY 173 Query: 138 IPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWP 181 +PGCPP P I+ A+ LLQ+KI A + ++P+ P Sbjct: 174 VPGCPPRPEQLIY----AITLLQEKIQAERGSFRRALNLEPVTP 213 >UniRef50_A9G9S9 NADH-quinone oxidoreductase subunit B 2 n=2 Tax=Myxococcales RepID=NUOB2_SORC5 Length = 182 Score = 192 bits (487), Expect = 1e-47, Method: Composition-based stats. Identities = 51/149 (34%), Positives = 73/149 (48%), Gaps = 5/149 (3%) Query: 27 LQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTR 86 L + RS V+ + G C IE+ P D ERFG SPR +D+ + G +T Sbjct: 37 LLNWGRSNSVWYMLFG-LACCAIELMQTGGPRGDLERFGAAPRPSPRSSDLFIIAGTLTY 95 Query: 87 AMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPA 146 M R Y+ + + +S G+C GG+F YSV G D I+P+DV++PGCPP P Sbjct: 96 KMATRVKRLYDQMSEPRFVISMGSCSNCGGLFQYAYSVCKGVDQIIPVDVYVPGCPPRPE 155 Query: 147 ATIHGFAVALGLLQQKIHAVDYRDPTGVT 175 A + G +Q+KI + G T Sbjct: 156 ALLEGLL----KIQEKIKSERALGRRGAT 180 >UniRef50_Q1IZX2 NADH-quinone oxidoreductase subunit B n=16 Tax=cellular organisms RepID=NUOB_DEIGD Length = 178 Score = 191 bits (486), Expect = 1e-47, Method: Composition-based stats. Identities = 49/145 (33%), Positives = 74/145 (51%), Gaps = 7/145 (4%) Query: 25 HLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIK-VVSSPRHADILLFTGA 83 L RS ++ G C IE+ ++ D RFG + +SPR AD+++ G Sbjct: 25 EKLVAWGRSNSLWP-ATFGLACCAIEMMSSTDGRNDLSRFGSEVFRASPRQADVMIVAGR 83 Query: 84 VTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPP 143 +++ M R Y+ PD K +S GAC GG+F + Y+V D +VP+DV++PGCPP Sbjct: 84 LSKKMAPIMRRVYDQMPDPKWVISMGACASSGGMF-NNYAVVQNVDHVVPVDVFVPGCPP 142 Query: 144 TPAATIHGFAVALGLLQQKIHAVDY 168 P A I+ LQ+K+ Y Sbjct: 143 RPEALIYAVM----QLQKKVRGEAY 163 >UniRef50_B5E8B5 NADH ubiquinone oxidoreductase 20 kDa subunit n=13 Tax=Bacteria RepID=B5E8B5_GEOBB Length = 332 Score = 191 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 72/227 (31%), Positives = 106/227 (46%), Gaps = 18/227 (7%) Query: 22 MKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITP-VFDAERFGIKVVSSPRHADILLF 80 M+ + + ++R++ G CN C++E+ FD E+ G + P ADILL Sbjct: 1 MQDQVKETPAEPVRLFRINTGSCNGCDVELAVTAAVDEFDVEQLGCRYTEEPHEADILLI 60 Query: 81 TGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPG 140 TG +T R ALR Y AP+ K+ V+ G C V GG+F D Y+V G +P+D+ +PG Sbjct: 61 TGPLTVRARNEALRLYAEAPETKVTVAVGVCPVSGGVFRDSYAVDGPVQRYLPVDLNVPG 120 Query: 141 CPPTPAATIHGFAVALGLLQQKIHAVD---YRDPTGVTMQPLWPQIPPSQRIAIEREARR 197 CPP P A + G A A L + + VD P Q P R++ + +A Sbjct: 121 CPPRPQALLAGIAQARDLWRARSKGVDAVFAAPPLAKPADEPAQQFPIRGRMSFDPKA-- 178 Query: 198 LAGYRQGREIC-----------DRLLRHL-SDDPTGNRVNTWLRDAD 232 R R +C D+ RHL S P+GN+ + LR Sbjct: 179 CVDCRMCRHVCAAGAIHFDIKGDKGDRHLRSQSPSGNKEDRHLRSLS 225 >UniRef50_A5FW47 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FW47_ACICJ Length = 264 Score = 191 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 56/140 (40%), Positives = 76/140 (54%), Gaps = 1/140 (0%) Query: 28 QDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRA 87 + RRS +V VD G CN CE E+ A P ++ R GI SPR AD+LL TG VTRA Sbjct: 122 RGFRRSLHVRHVDAGSCNGCESELQALNNPFYNLHRLGIFFTPSPRFADLLLVTGPVTRA 181 Query: 88 MRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAA 147 M P R +E+ P + ++ G C V GGI G + +P+D+++PGCPP PAA Sbjct: 182 MLEPLRRTWEAMPAPRWVMASGTCAVSGGIAPGGP-CLSGLEEALPVDLYLPGCPPNPAA 240 Query: 148 TIHGFAVALGLLQQKIHAVD 167 I + LG Q++ Sbjct: 241 IIEALLMFLGRRAQRVRGGR 260 >UniRef50_Q492H7 NADH-quinone oxidoreductase subunit B n=225 Tax=Bacteria RepID=NUOB_BLOPB Length = 236 Score = 190 bits (484), Expect = 3e-47, Method: Composition-based stats. Identities = 47/169 (27%), Positives = 84/169 (49%), Gaps = 5/169 (2%) Query: 1 MSPVLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFD 60 ++ L +++ + + + + + + + S + Y G + C +E+ A T + D Sbjct: 26 VTDPLEKNIQRNVFFGKLSAFLHKIVNWGRGNSLWPYNF---GLSCCYVEMTTAFTAIHD 82 Query: 61 AERFGIKV-VSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFH 119 RFG +V +SPR AD ++ G M R Y+ + K +S GAC GG++ Sbjct: 83 VARFGSEVLRASPRQADFMVIAGTPFLKMVPVIQRLYDQMLEPKWVISMGACANSGGMY- 141 Query: 120 DLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDY 168 D+YSV G D +P+D++IPGCPP P A I G + + ++ + + Sbjct: 142 DIYSVVQGVDKFLPVDLYIPGCPPRPEAYIQGLLLLKKSINEERRPLSW 190 >UniRef50_Q24ST9 Formate hydrogenlyase subunit 7 n=2 Tax=Desulfitobacterium hafniense RepID=Q24ST9_DESHY Length = 155 Score = 190 bits (483), Expect = 4e-47, Method: Composition-based stats. Identities = 51/141 (36%), Positives = 83/141 (58%) Query: 15 LDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRH 74 L E+ + L+ +R+S ++ +DCG CN C+ E+ A + P++D +RFG+ V+SPRH Sbjct: 14 LSEKRLEQGEAHLRSLRQSWHIRHLDCGSCNGCDWEMSALLNPIYDLQRFGLDFVASPRH 73 Query: 75 ADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPI 134 ADIL+ TG ++ + AL YE P+ K ++ G C + GG+F + Y+ G +P+ Sbjct: 74 ADILMCTGPMSTHLIQAALATYEGTPNPKRIIAVGDCALDGGMFKEAYAAHNGVGEALPV 133 Query: 135 DVWIPGCPPTPAATIHGFAVA 155 D+ IPGCPP+P + Sbjct: 134 DIKIPGCPPSPDELLKVLLQL 154 >UniRef50_A0RY66 NADH-ubiquinone oxidoreductase, subunit B n=3 Tax=Thaumarchaeota RepID=A0RY66_CENSY Length = 160 Score = 190 bits (483), Expect = 4e-47, Method: Composition-based stats. Identities = 49/155 (31%), Positives = 77/155 (49%), Gaps = 8/155 (5%) Query: 19 TQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGI-KVVSSPRHADI 77 + + + S + ++ C +E AA P +D ERFGI + S R D+ Sbjct: 13 DKPLGYAINWGRIWSLWPVHIET---ACCSVEFGAASGPKYDVERFGIIEAFGSLRQCDL 69 Query: 78 LLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVW 137 ++ G +TR M Y+ P+ K ++ GAC + GG++ D Y+V G D ++P+DV+ Sbjct: 70 IVVQGTITRKMAPRLRLVYDQMPEPKYVIAMGACAITGGLYFDSYNVLPGIDGVLPVDVY 129 Query: 138 IPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPT 172 +PGCPP P I G LLQ+KI + R Sbjct: 130 VPGCPPRPETLIQG----CMLLQEKIKRMRARKEV 160 >UniRef50_C0QR84 NADH-quinone oxidoreductase chain b (Nadh dehydrogenasei, chain b) (Ndh-1, chain b) n=1 Tax=Persephonella marina EX-H1 RepID=C0QR84_PERMH Length = 181 Score = 189 bits (481), Expect = 6e-47, Method: Composition-based stats. Identities = 48/170 (28%), Positives = 73/170 (42%), Gaps = 4/170 (2%) Query: 19 TQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADIL 78 ++ L R S + V G C IE+ FD +R GI SPR +D+L Sbjct: 11 LTTVEEVLSWGRRNSLWPASV---GLACCAIEMMHTAASRFDTDRLGIIFRGSPRQSDVL 67 Query: 79 LFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWI 138 + G V + Y+ PD K ++ G C GG F Y+ G D I+P+DV++ Sbjct: 68 IVAGTVVNKVAPMLKLIYDQMPDPKWVIAMGGCSSAGGPFP-TYATLQGVDRIIPVDVYV 126 Query: 139 PGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQR 188 PGCPPTP A + G ++ K + + + IP ++ Sbjct: 127 PGCPPTPQALLWGILELQKKIKAKKEGKVWEEIPVREVPTASQPIPIKEK 176 >UniRef50_Q1D8S3 NADH-quinone oxidoreductase subunit B n=2 Tax=Cystobacterineae RepID=NUOB_MYXXD Length = 187 Score = 189 bits (481), Expect = 7e-47, Method: Composition-based stats. Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 5/158 (3%) Query: 22 MKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKV-VSSPRHADILLF 80 + + L + S + Y C +E + D RFG + SPR AD+L+ Sbjct: 25 VSKGLGWARKYSLFTYPYAT---ACCGMEYMSVAASRHDISRFGAEFPRFSPRQADLLMV 81 Query: 81 TGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPG 140 G + R YE + K V++G C GG F+D Y+V G D I+P+DV+IPG Sbjct: 82 VGTINLKQAPILKRVYEQMAEPKWVVAFGVCASSGG-FYDNYAVLQGIDRIIPVDVYIPG 140 Query: 141 CPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQP 178 CPP P + G + + ++H + R+ T Sbjct: 141 CPPRPEQVLDGLMLLQDKIGNQVHRIAEREEANPTAAR 178 >UniRef50_B3TC56 Putative NADH ubiquinone oxidoreductase, 20 Kd subunit n=1 Tax=uncultured marine microorganism HF4000_APKG10H11 RepID=B3TC56_9ZZZZ Length = 182 Score = 189 bits (480), Expect = 8e-47, Method: Composition-based stats. Identities = 45/146 (30%), Positives = 72/146 (49%), Gaps = 3/146 (2%) Query: 17 EQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHAD 76 ++ +K+ + + S +V + G C E A +D ERFG V+++ R D Sbjct: 29 KKVPLVKKLITWGRKNSLWVVHLTTG---CCSPEFAALAGAGYDMERFGPLVMAAMRQCD 85 Query: 77 ILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDV 136 IL+ G V M R Y+ PD K ++ G C + GG + D YS+ G D I+P+DV Sbjct: 86 ILIIEGQVADKMAEVVKRTYDQMPDPKYVIAVGNCAISGGFYWDSYSMVMGIDKIIPVDV 145 Query: 137 WIPGCPPTPAATIHGFAVALGLLQQK 162 ++PGCPP P I + + ++ Sbjct: 146 YVPGCPPRPEDWIDAIRLVQTRMDKE 171 >UniRef50_B6YWP9 NADH dehydrogenase (Ubiquinone), 20 kDa subunit n=4 Tax=Archaea RepID=B6YWP9_THEON Length = 191 Score = 188 bits (478), Expect = 1e-46, Method: Composition-based stats. Identities = 64/162 (39%), Positives = 89/162 (54%), Gaps = 11/162 (6%) Query: 30 IRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMR 89 ++ S +V+ ++ G CN C+IEI P D ER GIK+V SPRHAD + FTG +TR Sbjct: 2 VKNSLWVFHLNSGSCNGCDIEILNIFAPRNDVERLGIKLVGSPRHADAIAFTGPITRECL 61 Query: 90 MPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIV-----------PIDVWI 138 + A ++ P+ K+ ++ GAC GGGI++D YSV GG + P V+I Sbjct: 62 PKVIDALKAVPEPKVVLAIGACACGGGIWYDTYSVIGGVKELYRILKEEYNMEPPATVFI 121 Query: 139 PGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLW 180 PGCPP P A I+G AVA G+L+ K Y +P Sbjct: 122 PGCPPKPEAIIYGVAVASGMLESKQKKTVYVEPEESVANEKL 163 >UniRef50_A0B811 F420H2 dehydrogenase subunit B n=6 Tax=Archaea RepID=A0B811_METTP Length = 190 Score = 188 bits (478), Expect = 1e-46, Method: Composition-based stats. Identities = 44/145 (30%), Positives = 77/145 (53%), Gaps = 2/145 (1%) Query: 24 RHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGA 83 +++L R+++ + + GC C +E+ P +D +RFGI ++PR AD+++ +G Sbjct: 48 KNVLNWGRKNSLWFLMQPMGC--CGVEMLVFGCPHYDCDRFGIIPRATPRQADVMIISGY 105 Query: 84 VTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPP 143 +TR +E + K C++ G C + GG F+D Y++ + PIDV++PGCPP Sbjct: 106 ITRKYLPAIKNLWEQMLEPKWCIAVGECAISGGPFYDSYNIIQNTSDFFPIDVYVPGCPP 165 Query: 144 TPAATIHGFAVALGLLQQKIHAVDY 168 P I GF ++Q+ Y Sbjct: 166 RPEQFIKGFVELQEKIKQRKDKRGY 190 >UniRef50_C5CEV5 NADH ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=cellular organisms RepID=C5CEV5_KOSOT Length = 137 Score = 187 bits (476), Expect = 2e-46, Method: Composition-based stats. Identities = 56/132 (42%), Positives = 76/132 (57%) Query: 28 QDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRA 87 + ++RS +V+ V CN C+IEI +TP +D ERFGIK+V S RHAD+LL TG Sbjct: 6 KILKRSLWVFHVSASPCNNCDIEILDMLTPRYDLERFGIKLVGSVRHADVLLVTGMGGCK 65 Query: 88 MRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAA 147 + +R Y AP ++ G C V G F + Y+ G D VP+D++IPGCPP P Sbjct: 66 VSERVIRIYNQAPKPVFVIAVGTCPVAGATFKESYTRCGPLDRFVPVDLYIPGCPPKPET 125 Query: 148 TIHGFAVALGLL 159 I G + LG L Sbjct: 126 MIAGLSELLGRL 137 >UniRef50_D2RET0 NADH-quinone oxidoreductase, B subunit n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RET0_ARCPR Length = 709 Score = 187 bits (476), Expect = 2e-46, Method: Composition-based stats. Identities = 57/222 (25%), Positives = 96/222 (43%), Gaps = 15/222 (6%) Query: 28 QDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRA 87 + S + + C +E+ A +DAER G R ++++ GA+TR Sbjct: 5 WGTKWSLWPVHLVT---ACCGVELAHAYACGYDAERIGSLNYGICRQTNLIIVEGAITRK 61 Query: 88 MRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAA 147 M +E P+ K + GACG+ GG+F + Y + D + +DV++PGCPPTP A Sbjct: 62 MARVLRITWEQMPNPKFVIVMGACGIKGGLFKNSYHMVRPWDVVP-VDVFVPGCPPTPEA 120 Query: 148 TIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIEREARRLAGYRQGREI 207 I G ++ K + + + + ++PP + +E A + +GR+ Sbjct: 121 LIRGIVALQKKIEGKEDFDKFEEVSIEVEKGKVRKLPPLKEFRVENPA-VVPNVERGRDD 179 Query: 208 CDRLLRHLSDDPTGNRVNTWLRD------ADDPRLNSIVQQL 243 + L +D G RV T +D D R I+ L Sbjct: 180 YAKTL----EDVLGVRVYTVGKDHYYAFVDDVKRSAEILAHL 217 >UniRef50_Q2T5T7 Formate hydrogenlyase subunit 7 n=21 Tax=Bacteria RepID=Q2T5T7_BURTA Length = 174 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 59/155 (38%), Positives = 87/155 (56%), Gaps = 5/155 (3%) Query: 11 QPITLDEQT-----QKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFG 65 +P E Q +++ +L + R+ + +D G CN CE+E+ A P ++ E G Sbjct: 16 EPAPAGEPAWQRDAQPIRQEILDILGRALCIRAIDAGSCNGCELELNALGNPYYNIEGLG 75 Query: 66 IKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVW 125 IK V+SPRHAD+LL TG +T MR AY++ P K+ V+ G C GG+F Y+V Sbjct: 76 IKFVASPRHADMLLITGPLTLNMRDAVRLAYDATPAPKLVVAAGDCACTGGVFAGSYAVC 135 Query: 126 GGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQ 160 G +T+VP+DV I GCPP P + G AL ++ Sbjct: 136 GPVETLVPVDVAIAGCPPRPIDLLRGIRGALERVR 170 >UniRef50_A3THJ2 NADH dehydrogenase beta subunit n=2 Tax=Bacteria RepID=A3THJ2_9MICO Length = 198 Score = 187 bits (475), Expect = 3e-46, Method: Composition-based stats. Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 2/119 (1%) Query: 43 GCNACEIEIFAAITPVFDAERFGIK-VVSSPRHADILLFTGAVTRAMRMPALRAYESAPD 101 G C IE+ A TP +D RFG++ ++PR AD+++ G V+ M + Y+ P+ Sbjct: 34 GLACCAIEMMAVGTPDYDIARFGMERFSATPRQADLMIVAGRVSNKMAPVVRQVYDQMPN 93 Query: 102 HKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQ 160 K +S G C GG+F + Y++ G D I+P+D+++PGCPP P ++ +Q Sbjct: 94 PKWVISMGVCASSGGMF-NNYAIVQGVDHIIPVDIYLPGCPPRPEMLLNAIIELHDQIQ 151 >UniRef50_A6Q6W5 Ni-Fe hydrogenase, small subunit HycG n=3 Tax=Epsilonproteobacteria RepID=A6Q6W5_SULNB Length = 168 Score = 187 bits (474), Expect = 3e-46, Method: Composition-based stats. Identities = 54/155 (34%), Positives = 83/155 (53%), Gaps = 4/155 (2%) Query: 9 VSQPITLDEQTQKMKRHLLQDIRR----SAYVYRVDCGGCNACEIEIFAAITPVFDAERF 64 +++ LD++ + +KR + +++++ S + VD G CNACE E A P +D ER Sbjct: 14 LTEDTALDKELEAIKREIKENVKKKFAGSLAIRMVDSGSCNACEAECNALSNPYYDLERL 73 Query: 65 GIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSV 124 GI V+SPRHAD++L G +T M L AY+ P+ K ++ GAC V F ++V Sbjct: 74 GIYFVASPRHADVMLLNGLMTFNMTPHVLDAYKQIPEPKWVITLGACPVMEAPFEKTFAV 133 Query: 125 WGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLL 159 + +P+ IPGCPP P I G L + Sbjct: 134 KAPAADHLPVAHHIPGCPPEPLEIIRGLLEFLKKI 168 >UniRef50_A3PKI1 NADH-quinone oxidoreductase subunit B 2 n=6 Tax=Proteobacteria RepID=NUOB2_RHOS1 Length = 205 Score = 187 bits (474), Expect = 4e-46, Method: Composition-based stats. Identities = 63/172 (36%), Positives = 90/172 (52%), Gaps = 13/172 (7%) Query: 31 RRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKV-VSSPRHADILLFTGAVTRAMR 89 + S + + G + C +E+ A+TPV+D RFG +V S+PR AD+L+ +G V R M Sbjct: 35 KHSLWPFNF---GLSCCYVEMATALTPVYDQARFGAEVIRSTPRQADLLIVSGTVFRKMA 91 Query: 90 MPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATI 149 +P R Y + + +S GAC GG++ D+YSV G D+ +P+DV++PGCPP P A + Sbjct: 92 VPLYRLYSQMREPRWVISMGACANSGGMY-DIYSVVQGVDSFLPVDVYVPGCPPRPEALM 150 Query: 150 HGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIP--PSQRIAIEREARRLA 199 LLQ KI P + M P P P R REAR Sbjct: 151 EALV----LLQSKIATEAR--PLQIRMGETGPARPFDPIPRRDALREARMAV 196 >UniRef50_D2R5G9 NADH-quinone oxidoreductase, B subunit n=2 Tax=Planctomycetaceae RepID=D2R5G9_9PLAN Length = 192 Score = 186 bits (473), Expect = 6e-46, Method: Composition-based stats. Identities = 43/180 (23%), Positives = 74/180 (41%), Gaps = 7/180 (3%) Query: 9 VSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIK- 67 ++ + + K+ + S + C IE+ A D RFG + Sbjct: 1 MAIDLPENVMVTKLDELANWCRKNSLWPMPFAT---ACCGIELMATGASRHDLARFGAEV 57 Query: 68 VVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGG 127 SPR D+++ G V M R ++ + K C+S GAC GG+F D Y+V G Sbjct: 58 FRFSPRQCDLMIVAGRVVMKMLPVLQRIWQQMHEPKWCISMGACASTGGVF-DTYAVVQG 116 Query: 128 SDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQK--IHAVDYRDPTGVTMQPLWPQIPP 185 D +P+D+++PGCPP P +Q++ I ++ + ++P Sbjct: 117 IDRFIPVDMYVPGCPPRPEQLTQAIIDLQDKIQREGTITGEEFETAARQERKRALQELPI 176 >UniRef50_C9RKY2 NADH-quinone oxidoreductase, B subunit n=2 Tax=cellular organisms RepID=C9RKY2_FIBSS Length = 419 Score = 186 bits (472), Expect = 7e-46, Method: Composition-based stats. Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 7/145 (4%) Query: 29 DIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIK-VVSSPRHADILLFTGAVTRA 87 + R+ ++ + G + C IE+ ++ +D RFG + SSPR AD+ + G +TR Sbjct: 29 NWARANSIWPL-TYGTSCCAIEMMSSSMARYDIARFGSEVFRSSPRQADLFILAGTITRR 87 Query: 88 MRMPALRAYESAPDHKICVSYGACGVGGGIF-HDLYSVWGGSDTIVPIDVWIPGCPPTPA 146 M +E P K ++ GAC + GG F +D YSV G+ ++P+DV++PGCPP P Sbjct: 88 MAPAIQMLWEQIPGPKYVIAMGACTISGGPFIYDNYSVVRGAQNLIPVDVFVPGCPPRPE 147 Query: 147 ATIHGFAVALGLLQQKIHAVDYRDP 171 A HG L++KI R+P Sbjct: 148 ALFHGLLT----LREKILKETCRNP 168 >UniRef50_C9RJJ6 NADH-quinone oxidoreductase, B subunit n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJJ6_FIBSS Length = 211 Score = 186 bits (472), Expect = 7e-46, Method: Composition-based stats. Identities = 52/197 (26%), Positives = 87/197 (44%), Gaps = 14/197 (7%) Query: 25 HLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVS-SPRHADILLFTGA 83 L + RS ++ G C IE + +D R G + V +PR +D+LL G Sbjct: 16 DFLVNWGRSNSLWPF-PYGTACCAIEFMSTEVGRYDLSRIGSEYVRFTPRQSDVLLVAGT 74 Query: 84 VTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPP 143 +T R YE + + ++ GAC GG F+D Y G D I+P+DV+I GCPP Sbjct: 75 ITYKQAPILKRIYEQMAEPRWVIAMGACASSGG-FYDCYCTVPGIDHIIPVDVYIGGCPP 133 Query: 144 TPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIEREARRLAGYRQ 203 P A F A+ LQ+K+ + +++ ++ + +REA A Sbjct: 134 RPEA----FFDAMFDLQKKVKDESFMKQRAESVKEQL-EMIKVKTAEAKREAAACA---- 184 Query: 204 GREICD--RLLRHLSDD 218 ++ D ++ ++ Sbjct: 185 REKVVDIKDFMKEKQEN 201 >UniRef50_Q57936 Uncharacterized protein MJ0516 n=21 Tax=Euryarchaeota RepID=Y516_METJA Length = 148 Score = 186 bits (472), Expect = 8e-46, Method: Composition-based stats. Identities = 60/150 (40%), Positives = 87/150 (58%), Gaps = 7/150 (4%) Query: 22 MKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFT 81 M + L + +RS +V V+ GGCN C+IEI A + P +D E++GI V ++PR AD+LL T Sbjct: 1 MMKELFR--KRSIHVCVVNTGGCNGCDIEIVACLAPRYDIEQYGIYVHNNPREADVLLVT 58 Query: 82 GAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGC 141 G VT YE P+ KI V+ GAC + GGIF + V GG D ++P+D IPGC Sbjct: 59 GPVTLQWAERLKEIYEKTPEPKIVVAVGACALSGGIFKEG-HVVGGVDKVIPVDAKIPGC 117 Query: 142 PPTPAATIHGFA----VALGLLQQKIHAVD 167 PP P+ I A+ + ++++ D Sbjct: 118 PPRPSEIIETILKVAPKAIAMREKRLKNKD 147 >UniRef50_B9L626 NADH-ubiquinone oxidoreductase 20 kDa subunit n=3 Tax=Epsilonproteobacteria RepID=B9L626_NAUPA Length = 157 Score = 185 bits (470), Expect = 1e-45, Method: Composition-based stats. Identities = 52/152 (34%), Positives = 80/152 (52%), Gaps = 10/152 (6%) Query: 32 RSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMP 91 +S ++ G C +E+ AA+ P +D ER+G + +PR ADI+ TG V++ + Sbjct: 14 KSPWIVHFCSG---CCSLEMLAAMGPRYDWERYGYIMTPTPRQADIMFITGLVSKKILPA 70 Query: 92 ALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHG 151 LR YE P+ + V+ GAC GG ++D SV I+P DV++ GCPP P A I G Sbjct: 71 LLRTYEQMPEPRYVVAIGACAYDGGPYNDSVSVIKNMTEILPADVFVAGCPPRPEAIIAG 130 Query: 152 FAVALGLLQQKIHAVDYRDPTGVTMQPLWPQI 183 L++KI +P+ + LW Q+ Sbjct: 131 L----EELKEKIKRG---EPSASSQGGLWKQM 155 >UniRef50_C7PSH0 NADH-quinone oxidoreductase, B subunit n=4 Tax=Sphingobacteriales RepID=C7PSH0_CHIPD Length = 187 Score = 185 bits (470), Expect = 1e-45, Method: Composition-based stats. Identities = 46/145 (31%), Positives = 75/145 (51%), Gaps = 9/145 (6%) Query: 31 RRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVS-SPRHADILLFTGAVTRAMR 89 + S + + C IE A + +D RFG + ++ +PR D+L+ G +++ M Sbjct: 39 KNSIWPLPFAT---SCCGIEFMATMASTYDMSRFGSERMAFTPRQCDLLMVMGTISKKMA 95 Query: 90 MPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATI 149 + Y + + V+ GAC GG+F D YSV G D ++P+DV++PGCPP P A I Sbjct: 96 PVLRQVYLQMAEPRWVVAVGACASSGGVF-DTYSVLQGIDQVIPVDVYVPGCPPRPEAII 154 Query: 150 HGFAVALGLLQQ----KIHAVDYRD 170 GF L+ Q + H+ Y++ Sbjct: 155 DGFMRVQDLVGQESLRRRHSDKYKE 179 >UniRef50_Q26783 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial n=7 Tax=Trypanosomatidae RepID=NDUS7_TRYBB Length = 202 Score = 185 bits (470), Expect = 1e-45, Method: Composition-based stats. Identities = 43/122 (35%), Positives = 63/122 (51%), Gaps = 4/122 (3%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDH 102 G C +E+ A +D +RFGI +PR A+I++ +G VT M Y + Sbjct: 74 GLACCAVEMMHAYASRYDLDRFGIVPRPTPRQAEIIIVSGTVTNKMAPILRNIYVQMVNP 133 Query: 103 KICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQK 162 K +S G+C GGG +H Y+V G + +P+D WIPGCPP+ + L LQ+K Sbjct: 134 KWVISMGSCANGGGYYHFSYAVLRGCERAIPVDFWIPGCPPSAESL----VFCLHTLQKK 189 Query: 163 IH 164 I Sbjct: 190 IR 191 >UniRef50_C1A8Z3 NADH-quinone oxidoreductase chain B n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8Z3_GEMAT Length = 212 Score = 184 bits (468), Expect = 2e-45, Method: Composition-based stats. Identities = 57/163 (34%), Positives = 79/163 (48%), Gaps = 3/163 (1%) Query: 25 HLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVS-SPRHADILLFTGA 83 L + R+ ++ + G C IE A FD RFG++ +S SPR AD+LL G Sbjct: 32 DFLVNWGRAGSLWPMPFG-TACCAIEFMATAASRFDLSRFGMERLSYSPRQADVLLCAGR 90 Query: 84 VTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPP 143 V + R Y+ P K +S GAC GG+F D Y+V G DTI+P+DV++PGCPP Sbjct: 91 VPLKLAPVLRRIYQQMPQPKWVISMGACASTGGMF-DNYAVVQGIDTIIPVDVYVPGCPP 149 Query: 144 TPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPS 186 P A +H + + Q+ R IPPS Sbjct: 150 RPEALMHAIIMLQKKVMQERLKDSTRHVEIDPDPTSQLYIPPS 192 >UniRef50_B1ZUJ0 NADH-quinone oxidoreductase subunit B 2 n=13 Tax=Bacteria RepID=NUOB2_OPITP Length = 191 Score = 184 bits (467), Expect = 2e-45, Method: Composition-based stats. Identities = 43/123 (34%), Positives = 60/123 (48%), Gaps = 3/123 (2%) Query: 43 GCNACEIEIFAAITPVFDAERFGIK-VVSSPRHADILLFTGAVTRAMRMPALRAYESAPD 101 G C IE+ AA FD RFG + SPR AD+++ G V + M Y+ + Sbjct: 59 GLACCAIEMMAAGMARFDISRFGAEVFRPSPRQADVMIVAGTVNKKMAPAVKLLYDQMLE 118 Query: 102 HKICVSYGACGVGGGIFH--DLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLL 159 K ++ G C + GG F Y+V G D + P+DV++PGCPP P A I G + Sbjct: 119 PKWVIAMGQCAISGGPFKYPGQYAVVEGVDQLFPVDVYVPGCPPRPEALIEGILKLEEKI 178 Query: 160 QQK 162 K Sbjct: 179 TGK 181 >UniRef50_Q3A825 NADH-quinone oxidoreductase subunit B/C/D n=103 Tax=cellular organisms RepID=NUBCD_PELCD Length = 794 Score = 184 bits (467), Expect = 3e-45, Method: Composition-based stats. Identities = 52/197 (26%), Positives = 89/197 (45%), Gaps = 7/197 (3%) Query: 9 VSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKV 68 +S+ I + + + + S + G + C +E+ ++TP FD RFG +V Sbjct: 1 MSESIPKNIILTTLDDAINWGRKNSMWPMFF---GLSCCFVEMMGSMTPRFDLARFGAEV 57 Query: 69 -VSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGG 127 +PR AD+++ G + M LR YE + K ++ G+C GG++ D+YSV G Sbjct: 58 LRGTPREADLMVIAGTPFKKMAASMLRVYEEMANPKWVIAMGSCANSGGMY-DVYSVMQG 116 Query: 128 SDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQ 187 + ++P+DV+IPGCPP P A + G + +K R + +P Sbjct: 117 VNQVLPVDVYIPGCPPRPEAFMQGLMTLQEKIARK--ESPARPVLNLRGGNEGTTVPILI 174 Query: 188 RIAIEREARRLAGYRQG 204 + + R GY Sbjct: 175 DGSSKTRDTRGPGYGHC 191 >UniRef50_D2EGC1 NADH-quinone oxidoreductase, B subunit n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EGC1_9EURY Length = 172 Score = 184 bits (466), Expect = 3e-45, Method: Composition-based stats. Identities = 47/134 (35%), Positives = 73/134 (54%), Gaps = 2/134 (1%) Query: 29 DIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVS-SPRHADILLFTGAVTRA 87 + RS ++ + G + C IE+ DA+R G+ SPR +D++L +G +T+ Sbjct: 29 NWGRSNSLWPL-TFGTSCCAIEMMTFGATKVDADRLGVLFNGDSPRQSDLILVSGTITKK 87 Query: 88 MRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAA 147 M L YE PD K ++ GAC V GG++HD Y+ G D I+P+D +IPGCPP P Sbjct: 88 MARRLLNVYEQIPDPKYVIAVGACNVSGGLYHDSYNTIEGIDRIMPVDAFIPGCPPRPEE 147 Query: 148 TIHGFAVALGLLQQ 161 + V L+++ Sbjct: 148 FLDAVRVLQKLIKE 161 >UniRef50_A4J659 NADH-quinone oxidoreductase subunit B n=34 Tax=Firmicutes RepID=NUOB_DESRM Length = 196 Score = 182 bits (463), Expect = 7e-45, Method: Composition-based stats. Identities = 55/161 (34%), Positives = 84/161 (52%), Gaps = 6/161 (3%) Query: 4 VLTQHVSQPITLDEQTQKMKR---HLLQDIRRSAYVYRVDCGGCNACEIE-IFAAITPVF 59 L + ++P + E + + L ++ R+ ++ + G C IE + AA F Sbjct: 25 RLKKLGAEPAVIGEVARTVSVGPLEKLLNLARANSLWPMGFG-LACCAIEGLMAANMARF 83 Query: 60 DAERFGIKV-VSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIF 118 D RFG +V +SPR AD++L G VT+ +R YE + K ++ G+C + GG F Sbjct: 84 DLARFGYEVMRASPRQADVMLVCGTVTKKAAPFVVRLYEQMAEPKYVIAMGSCAISGGPF 143 Query: 119 HDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLL 159 D YSV G D ++P+DV+IPGC P P A IHGF + Sbjct: 144 VDSYSVVPGVDKLIPVDVYIPGCAPRPDAVIHGFMKLKEKI 184 >UniRef50_UPI00016C3AA7 NADH-quinone oxidoreductase, B subunit n=2 Tax=Bacteria RepID=UPI00016C3AA7 Length = 201 Score = 182 bits (463), Expect = 7e-45, Method: Composition-based stats. Identities = 43/132 (32%), Positives = 64/132 (48%), Gaps = 5/132 (3%) Query: 31 RRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIK-VVSSPRHADILLFTGAVTRAMR 89 + S + C IE+ A + +D RFG + + SPR D+++ G V M Sbjct: 24 KHSLWPMPFAT---ACCGIELMATASSRYDIARFGSEAMRFSPRQCDVMIVAGRVAMKMV 80 Query: 90 MPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATI 149 R + P+ K C+S GAC GG+F D Y+V G D +P+DV++PGCPP P I Sbjct: 81 PVMQRIWLQMPEPKWCISMGACASSGGVF-DTYAVVQGIDRFIPVDVYVPGCPPRPEQLI 139 Query: 150 HGFAVALGLLQQ 161 +Q+ Sbjct: 140 RAVLDLQEKIQK 151 >UniRef50_Q0W6T1 [NiFe]-hydrogenase, small subunit (EchC-like) n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W6T1_UNCMA Length = 135 Score = 182 bits (463), Expect = 8e-45, Method: Composition-based stats. Identities = 57/134 (42%), Positives = 80/134 (59%), Gaps = 2/134 (1%) Query: 27 LQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTR 86 + I+RS +VY GGC C+IE+ A++ P +D ER G+++V SPR+AD+LL TG V Sbjct: 1 MNMIKRSPWVYHAHAGGCVGCDIELVASMGPRYDLERLGVRLVPSPRYADVLLVTGPVPL 60 Query: 87 AMRMPALRAYESAPDHKICVSYGACGVGGGIFHD--LYSVWGGSDTIVPIDVWIPGCPPT 144 + R Y P+ K ++ GACG G+F D YS+ G D I+P+DV IPGCPP Sbjct: 61 HTKPFLERVYAQTPEPKRVIAIGACGCSCGVFIDDENYSIAGPVDKIIPVDVKIPGCPPK 120 Query: 145 PAATIHGFAVALGL 158 P A + G L + Sbjct: 121 PEAIMEGIIKVLRM 134 >UniRef50_B0SFT5 NADH-quinone oxidoreductase subunit B n=13 Tax=cellular organisms RepID=NUOB_LEPBA Length = 186 Score = 182 bits (462), Expect = 9e-45, Method: Composition-based stats. Identities = 45/153 (29%), Positives = 67/153 (43%), Gaps = 5/153 (3%) Query: 33 SAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIK-VVSSPRHADILLFTGAVTRAMRMP 91 S + Y C IE + +D RFG + SPR AD++L G +T M Sbjct: 34 SLWPYPFAT---ACCGIEYMSTACADYDIARFGAERPSFSPRQADMILVLGTITYKMAPV 90 Query: 92 ALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHG 151 + Y+ + K +S GAC GG+FH Y V G D I+P+DV++PGCPP P A + Sbjct: 91 LRQIYDQLAEPKFVISVGACASSGGMFH-TYGVLQGVDRILPVDVYVPGCPPRPEAILDA 149 Query: 152 FAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIP 184 +Q + ++ + P Sbjct: 150 LVKLQKKVQSQGLEARRQEVMRKIEEINERNKP 182 >UniRef50_A1RZ48 NADH-quinone oxidoreductase, B subunit n=3 Tax=Thermoprotei RepID=A1RZ48_THEPD Length = 171 Score = 181 bits (459), Expect = 2e-44, Method: Composition-based stats. Identities = 46/138 (33%), Positives = 74/138 (53%), Gaps = 8/138 (5%) Query: 33 SAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPA 92 S + + C E A P FDAERFG +SPR ++++ G +T+ M A Sbjct: 41 SLWPVHFTT---SCCGAEFAATSAPRFDAERFGFLPFNSPRQTNLMVIEGTLTKKMGEAA 97 Query: 93 LRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGF 152 Y+ P K ++ GAC + GG+F++ Y++ D I+P++ +IPGCPP P A Sbjct: 98 KIVYDQMPWPKFVIAMGACAIDGGLFYNSYNIVRPKD-ILPVEYFIPGCPPRPEAV---- 152 Query: 153 AVALGLLQQKIHAVDYRD 170 A A+ +LQ+K+ ++R Sbjct: 153 AQAIIMLQEKVRKGEWRK 170 >UniRef50_A2BJ94 NAD(P)H-quinone oxidoreductase chain K n=10 Tax=Thermoprotei RepID=A2BJ94_HYPBU Length = 209 Score = 181 bits (459), Expect = 2e-44, Method: Composition-based stats. Identities = 56/196 (28%), Positives = 94/196 (47%), Gaps = 11/196 (5%) Query: 4 VLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAER 63 L + ++ + + + +K L I S + + + C E A P +D+ER Sbjct: 15 RLEEAAAKAMKWLLERKPIKSLLDWGISFSLWPVHLTT---SCCGAEFAAVYDPKYDSER 71 Query: 64 FGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYS 123 G + PR+ ++LL G +TR M A +E P K ++ GAC + GGIF++ Y+ Sbjct: 72 LGSLPFTHPRNTNVLLVEGTLTRKMARAARLVWEQMPWPKFVIAMGACAITGGIFYNSYN 131 Query: 124 VWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQI 183 + + I+P+D ++PGCPPTP A A AL LQ+K+ +++ + L + Sbjct: 132 IVR-VNQILPVDYYVPGCPPTPEAV----ANALIKLQEKVRKGEWKPRDIEDKKFLEELM 186 Query: 184 PP---SQRIAIEREAR 196 P R +E AR Sbjct: 187 APHYEKARRHLELLAR 202 >UniRef50_C1VB41 NADH dehydrogenase subunit B n=1 Tax=Halogeometricum borinquense DSM 11551 RepID=C1VB41_9EURY Length = 236 Score = 181 bits (459), Expect = 2e-44, Method: Composition-based stats. Identities = 44/136 (32%), Positives = 68/136 (50%), Gaps = 5/136 (3%) Query: 43 GCNACEIEIFAAITPVFDAERFGI-KVVSSPRHADILLFTGAVTRAMRMPALRAYESAPD 101 G C IE+ + D +RF +SPR AD+++ G + R Y+ P+ Sbjct: 70 GIACCSIEMMHTYSVKHDLDRFAAGVPRASPRQADVIIVPGTIVSKFAPRMKRVYDQMPE 129 Query: 102 HKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQ 161 K V G+C V GG F + Y+V G++ ++P+D+ +PGCPP P A I+G A LQQ Sbjct: 130 PKFVVGMGSCTVSGGPFQEGYNVIKGAEEVIPVDIHVPGCPPRPEALIYGVA----KLQQ 185 Query: 162 KIHAVDYRDPTGVTMQ 177 +I + T + Sbjct: 186 RIAEGESSPVTVKPYE 201 >UniRef50_A9GUX6 NADH-quinone oxidoreductase subunit B 1 n=10 Tax=Bacteria RepID=NUOB1_SORC5 Length = 194 Score = 179 bits (454), Expect = 9e-44, Method: Composition-based stats. Identities = 55/182 (30%), Positives = 81/182 (44%), Gaps = 11/182 (6%) Query: 19 TQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIK-VVSSPRHADI 77 T ++ L + S + Y C +E A +P FD RFG + SPR AD+ Sbjct: 23 TTRVDALLNWAKKYSLFQYPFVT---ACCGMEYMAMASPRFDMARFGAEVPRFSPRQADL 79 Query: 78 LLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVW 137 L G +++ R YE D K +++G C GG F+D Y+ G D ++P DV+ Sbjct: 80 LWVVGTISQRQAPALKRIYEQMADPKWVLAFGTCASCGG-FYDNYTTVAGIDKVIPCDVY 138 Query: 138 IPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIEREARR 197 +PGCPP P A + G LLQ KI D + P + ++R+ R Sbjct: 139 VPGCPPRPEAVLDGLM----LLQDKIARGDRTPAIVKPRED--PAQTTEHLVTLQRKERS 192 Query: 198 LA 199 L Sbjct: 193 LP 194 >UniRef50_B1ZRT2 NADH-quinone oxidoreductase subunit B 1 n=4 Tax=Bacteria RepID=NUOB1_OPITP Length = 171 Score = 179 bits (453), Expect = 1e-43, Method: Composition-based stats. Identities = 46/127 (36%), Positives = 61/127 (48%), Gaps = 6/127 (4%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKV-VSSPRHADILLFTGAVTRAMRMPALRAYESAPD 101 G C IE+ FD RFG +V SPR +D ++ G+VT M R Y+ Sbjct: 41 GLACCAIELMQVGNGRFDIARFGAEVMRFSPRQSDCMIVAGSVTYKMAPQIRRIYDQMMS 100 Query: 102 HKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQ 161 K ++ GAC GG++ Y+ G D I+P+DV+I GCPP P G AL LQ Sbjct: 101 PKWVIAMGACASSGGMYR-SYAHMQGVDRILPVDVYISGCPPRPE----GILDALMKLQA 155 Query: 162 KIHAVDY 168 KI Sbjct: 156 KIRTERA 162 >UniRef50_B1KJU9 NADH-quinone oxidoreductase subunit B n=8 Tax=Proteobacteria RepID=NUOB_SHEWM Length = 213 Score = 179 bits (453), Expect = 1e-43, Method: Composition-based stats. Identities = 50/196 (25%), Positives = 92/196 (46%), Gaps = 10/196 (5%) Query: 3 PVLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAE 62 P TQ + + + + +++ + S + + G + C +E+ + T D Sbjct: 12 PTSTQTMQEVVEKNLLVTRLEDLVAWGRSNSLWPFNF---GLSCCYVEMATSFTSRHDIA 68 Query: 63 RFGIKV-VSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDL 121 RFG +V ++PR AD+++ +G V M Y+ + K + G+C GG++ D+ Sbjct: 69 RFGSEVIRATPREADLIVISGTVFLKMAPVIKHLYDQMLEPKWVICMGSCANSGGMY-DV 127 Query: 122 YSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWP 181 YSV G+D +PID+++PGCPP P A ++G LLQ+ I R + + P Sbjct: 128 YSVVQGADRFLPIDLYVPGCPPRPEALMYGLT----LLQEAIKDGAPRQARPLNRT-ITP 182 Query: 182 QIPPSQRIAIEREARR 197 + + R+ + Sbjct: 183 EEIQAFACRNMRDEKH 198 >UniRef50_Q0RRW7 NADH-quinone oxidoreductase subunit B n=5 Tax=Bacteria RepID=NUOB_FRAAA Length = 281 Score = 179 bits (453), Expect = 1e-43, Method: Composition-based stats. Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 8/159 (5%) Query: 24 RHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIK-VVSSPRHADILLFTG 82 L RRS+ G C IE+ + +D RFG++ +SPR AD+++ G Sbjct: 17 EKLANWSRRSSLW--PATFGLACCAIEMMSTGAGRYDLSRFGMEVFRASPRQADLMIVAG 74 Query: 83 AVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCP 142 V++ M + Y+ P+ K +S G C GG+F + Y++ G D IVP+D+++PGCP Sbjct: 75 RVSQKMAPVLRQIYDQMPEPKWVLSMGVCASSGGMF-NNYAIVQGVDHIVPVDMYLPGCP 133 Query: 143 PTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWP 181 P P + L +KI A T T P Sbjct: 134 PRPEMLMDAII----KLHEKILAGPVTGRTAHTESGSSP 168 >UniRef50_B0R3U2 NADH dehydrogenase-like complex subunit B n=11 Tax=Halobacteriaceae RepID=B0R3U2_HALS3 Length = 235 Score = 178 bits (451), Expect = 2e-43, Method: Composition-based stats. Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 1/158 (0%) Query: 43 GCNACEIEIFAAITPVFDAERFGI-KVVSSPRHADILLFTGAVTRAMRMPALRAYESAPD 101 G C IE+ + D +RF +SPR AD+++ G + R Y+ P+ Sbjct: 69 GIACCSIEMMHTYSVKHDLDRFHAGVPRASPRQADVMIVPGTIVSKFAPRMKRVYDQMPE 128 Query: 102 HKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQ 161 K V+ G C GG F + Y+V G++ ++P+D+ IPGCPP P A ++G A + Sbjct: 129 PKFVVNMGNCSTSGGPFQEGYNVVKGAEEVIPVDIHIPGCPPRPEALVYGVAKLQERIAN 188 Query: 162 KIHAVDYRDPTGVTMQPLWPQIPPSQRIAIEREARRLA 199 + P + + ++A + + L Sbjct: 189 GESSPVTVKPYELEEFGDLERDEIVDKLAADIDEESLV 226 >UniRef50_C5A4Q2 Membrane bound oxidoreductase, MbxJ subunit (MbxJ) n=11 Tax=cellular organisms RepID=C5A4Q2_THEGJ Length = 194 Score = 177 bits (449), Expect = 3e-43, Method: Composition-based stats. Identities = 49/148 (33%), Positives = 73/148 (49%), Gaps = 2/148 (1%) Query: 13 ITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSP 72 I+ + Q K+ L + R+ + C GC IE+ T +D ERFGI +P Sbjct: 8 ISYELQEFKLFEPLFRWARKKSLWIVAFCTGCGG--IEMPPLATARYDFERFGIMPNPAP 65 Query: 73 RHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIV 132 R AD+ L TG VT + YE D K +++G+C + GG++ D Y+V D + Sbjct: 66 RMADLFLITGYVTPKTLKRIIITYEMMQDPKYVLAHGSCPINGGVYWDSYNVVKQLDKYI 125 Query: 133 PIDVWIPGCPPTPAATIHGFAVALGLLQ 160 PIDV I GC P P A + G + ++ Sbjct: 126 PIDVAIAGCMPRPEAVMDGIMEIMRKIE 153 >UniRef50_Q2S5J2 NADH-quinone oxidoreductase subunit B n=4 Tax=Bacteria RepID=NUOB_SALRD Length = 213 Score = 176 bits (447), Expect = 5e-43, Method: Composition-based stats. Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 4/168 (2%) Query: 29 DIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIK-VVSSPRHADILLFTGAVTRA 87 + RS + + G C IE+ P +D+ RFG + + SPR AD+++ G + Sbjct: 22 NWARSNSLMPM-PMGLACCAIEMMGFAGPKYDSARFGSEAMRFSPRQADLMIVAGWCSYK 80 Query: 88 MRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAA 147 M R ++ D K C++ GAC GG+ H Y V G D +P+DV+I GCPP P + Sbjct: 81 MSHAIRRVWDQMGDPKWCIAMGACASTGGM-HRCYGVVQGVDNFLPVDVYISGCPPRPES 139 Query: 148 TIHGFAVALGLLQQKIHAV-DYRDPTGVTMQPLWPQIPPSQRIAIERE 194 +H ++ + V DY P+ P+ +E+ Sbjct: 140 VLHALMDIQEKIRNEYSVVQDYEFGKARERAPIMPENTNRFPGQLEKP 187 >UniRef50_C6X0Z2 NADH-ubiquinone oxidoreductase chain B n=2 Tax=Flavobacteriaceae RepID=C6X0Z2_FLAB3 Length = 185 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 47/129 (36%), Positives = 68/129 (52%), Gaps = 5/129 (3%) Query: 31 RRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVS-SPRHADILLFTGAVTRAMR 89 + S + + C IE A + P +DA RFG++ S SPR AD+L+ G +++ + Sbjct: 37 KYSLWPLPFAT---SCCGIEFMAVLNPTYDASRFGMERNSFSPRQADMLMVCGTISKKLG 93 Query: 90 MPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATI 149 + Y + + V+ GAC GGIF D YSV G D I+P+DV++PGCPP P I Sbjct: 94 PVLKQVYTQMAEPRWVVAVGACASSGGIF-DTYSVLQGIDKIIPVDVYVPGCPPRPEQII 152 Query: 150 HGFAVALGL 158 G L Sbjct: 153 EGVMQVQAL 161 >UniRef50_Q21TB3 NADH ubiquinone oxidoreductase, 20 kDa subunit n=2 Tax=Proteobacteria RepID=Q21TB3_RHOFD Length = 254 Score = 174 bits (441), Expect = 3e-42, Method: Composition-based stats. Identities = 50/139 (35%), Positives = 77/139 (55%), Gaps = 2/139 (1%) Query: 21 KMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLF 80 K+ + L + RS + V GGC+ CE+EI A FD R+GI +V+SPRHAD L+ Sbjct: 115 KVSKALHKRFGRSLKLRSVSAGGCSGCEMEINALSNVNFDLGRYGIDIVASPRHADALVL 174 Query: 81 TGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSV-WGGSDTIVPIDVWIP 139 +G +TR M +++ P+ K+ ++ GAC + GG+F D ++ D P +++P Sbjct: 175 SGPITRNMAQALQICWDAIPEPKLVIAVGACAISGGVFADSDALDRQFLDNFKPA-LYVP 233 Query: 140 GCPPTPAATIHGFAVALGL 158 GCP P I G LG+ Sbjct: 234 GCPAHPLTFISGIMDLLGI 252 >UniRef50_C7IWD0 Os01g0791600 protein n=3 Tax=Oryza sativa Japonica Group RepID=C7IWD0_ORYSJ Length = 379 Score = 174 bits (440), Expect = 3e-42, Method: Composition-based stats. Identities = 45/104 (43%), Positives = 61/104 (58%), Gaps = 1/104 (0%) Query: 56 TPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGG 115 FD +R+G+ SSPR AD++L G VT M +R YE P+ K ++ GAC + G Sbjct: 150 GSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITG 209 Query: 116 GIFH-DLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGL 158 G+F D YS G D ++P+DV++PGCPP P A I LGL Sbjct: 210 GMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDALTKLLGL 253 >UniRef50_C7JEU9 NADH-ubiquinone oxidoreductase 20 kDa subunit n=8 Tax=Acetobacter pasteurianus RepID=C7JEU9_ACEP3 Length = 165 Score = 173 bits (439), Expect = 5e-42, Method: Composition-based stats. Identities = 54/139 (38%), Positives = 78/139 (56%) Query: 20 QKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILL 79 Q M+R R ++ VD GGC C +E+ A +D E G V+SPR+AD+LL Sbjct: 14 QDMRRMKPVGPRWPLLLFHVDTGGCGGCGMELQALRYAPYDMEGAGFGFVTSPRNADVLL 73 Query: 80 FTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIP 139 TGA+TRAM A+++ P K ++ G+C + GG+F + Y+V GG + V ID+ IP Sbjct: 74 ITGALTRAMAPVLEAAWQAMPTPKGLIAVGSCALDGGMFPENYTVLGGLERRVSIDLKIP 133 Query: 140 GCPPTPAATIHGFAVALGL 158 GCPP P ++G G Sbjct: 134 GCPPAPQDVLNGLCSLFGK 152 >UniRef50_B8IYV4 NADH ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=Desulfovibrio RepID=B8IYV4_DESDA Length = 254 Score = 173 bits (438), Expect = 7e-42, Method: Composition-based stats. Identities = 57/154 (37%), Positives = 83/154 (53%), Gaps = 6/154 (3%) Query: 4 VLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAER 63 V + V+QP T + RRS + +V GCNACE + T VFD R Sbjct: 107 VPGKPVTQPATPPVPGK------FAIFRRSLKLRQVSAAGCNACEADCNVLGTLVFDLPR 160 Query: 64 FGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYS 123 FGI V+SPRHAD ++ TG V+ MR+ A+ Y + P+ ++ V+ GAC + GG+F D Sbjct: 161 FGIDFVASPRHADGIVLTGPVSENMRLAAIDTYNATPEPRLVVAVGACAISGGLFRDAPQ 220 Query: 124 VWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALG 157 G I+P+D+++PGCPP P + G + Sbjct: 221 CNNGIADILPVDLFVPGCPPNPWTILDGLLMLRE 254 >UniRef50_C7DI98 NADH-quinone oxidoreductase, B subunit n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI98_9EURY Length = 206 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 39/136 (28%), Positives = 60/136 (44%), Gaps = 1/136 (0%) Query: 43 GCNACEIEIFAAITPVFDAERFGIK-VVSSPRHADILLFTGAVTRAMRMPALRAYESAPD 101 G C IE+ DAER G +PR D+++ G VT++M R YE Sbjct: 65 GLACCAIELMDFGAARIDAERKGYLLFRGTPRQCDVMIVAGWVTKSMVPRVKRLYEQMAS 124 Query: 102 HKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQ 161 K V+YG C GG +++ Y++ G D ++P+DV+ GCPP P + Sbjct: 125 PKYVVAYGECATAGGPWYESYNIVKGIDQVLPVDVYAIGCPPKPENLFAALMKLQEKVGG 184 Query: 162 KIHAVDYRDPTGVTMQ 177 K+ + R + Sbjct: 185 KVAGSEERTIAENPRR 200 >UniRef50_B1L7S0 F420H2 dehydrogenase subunit n=3 Tax=Archaea RepID=B1L7S0_KORCO Length = 174 Score = 172 bits (435), Expect = 1e-41, Method: Composition-based stats. Identities = 47/163 (28%), Positives = 75/163 (46%), Gaps = 8/163 (4%) Query: 5 LTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERF 64 L + + + ++ I S + C E A+ P +DAER Sbjct: 14 LERSARKAAAWLVNKRPIRDIRDWGIAFSLWPVHFTT---ACCGAEFAASAAPKYDAERL 70 Query: 65 GIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSV 124 G R ++L G +++ M A+ YE P+ K + GAC + GGIF + Y++ Sbjct: 71 GFLPFIGIRQCNVLFIEGTLSKKMAEAAIWVYEQMPEPKFVIGMGACAIDGGIFWNSYNI 130 Query: 125 WGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVD 167 D I+P++V+IPGCPP P A A A+ +LQ+KI + Sbjct: 131 VRPMD-ILPVNVFIPGCPPRPEAV----AQAIIMLQRKIRKGE 168 >UniRef50_UPI0001B52F0A hydrogenase 4, Fe-S subunit n=1 Tax=Shigella sp. D9 RepID=UPI0001B52F0A Length = 173 Score = 172 bits (435), Expect = 1e-41, Method: Composition-based stats. Identities = 113/116 (97%), Positives = 115/116 (99%) Query: 1 MSPVLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFD 60 MSPVLTQHVSQPITLDEQTQKMK+HLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFD Sbjct: 1 MSPVLTQHVSQPITLDEQTQKMKQHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFD 60 Query: 61 AERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGG 116 AERFGIKV+SSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACG GGG Sbjct: 61 AERFGIKVISSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGAGGG 116 >UniRef50_A9BJL8 NADH ubiquinone oxidoreductase 20 kDa subunit n=8 Tax=cellular organisms RepID=A9BJL8_PETMO Length = 195 Score = 170 bits (432), Expect = 3e-41, Method: Composition-based stats. Identities = 41/140 (29%), Positives = 72/140 (51%), Gaps = 4/140 (2%) Query: 23 KRHLLQDIR-RSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFT 81 + R +S ++ C GC +E+ +T FD ER G+ +++PR AD+LL T Sbjct: 24 WEKIKNIFRGKSLWMLH-YCTGCG--AVELPPTMTARFDMERLGMGPMATPRQADVLLIT 80 Query: 82 GAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGC 141 G ++ + YE K V +G+C + GGI++D Y+V D +P+D+++ GC Sbjct: 81 GYLSVKTLRRVIYTYEQMMTPKYLVGFGSCTINGGIYYDSYAVINRLDYYLPVDLYVAGC 140 Query: 142 PPTPAATIHGFAVALGLLQQ 161 P P A ++ F ++ + Sbjct: 141 MPRPEAIMNTFKTLENMITK 160 >UniRef50_A1SQ82 NADH ubiquinone oxidoreductase, 20 kDa subunit n=15 Tax=Actinomycetales RepID=A1SQ82_NOCSJ Length = 162 Score = 168 bits (426), Expect = 1e-40, Method: Composition-based stats. Identities = 53/126 (42%), Positives = 71/126 (56%) Query: 33 SAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPA 92 S + VD G CN CEIE+ A PV+DAER+G ++V+SPRHAD++L TG VT M P Sbjct: 37 SVQIRHVDAGSCNGCEIEVGGAFGPVYDAERYGARLVASPRHADVVLVTGVVTHNMLEPL 96 Query: 93 LRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGF 152 R E+ P ++ ++ G C G F Y V G V +D+ +PGCPP PAA + Sbjct: 97 RRTVEATPRPRLVLAVGDCARNCGAFKGGYGVAGAVHDAVDVDLEVPGCPPEPAAIVDAL 156 Query: 153 AVALGL 158 G Sbjct: 157 RRVTGR 162 >UniRef50_C5U7Y6 NADH ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=Euryarchaeota RepID=C5U7Y6_9EURY Length = 154 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 46/140 (32%), Positives = 79/140 (56%), Gaps = 8/140 (5%) Query: 31 RRSAYVYRVDCGGCNACEIE-IFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMR 89 ++ +V V GGCN C+IE + A +P +DAE++ + + +PR DIL+ +G VT+ ++ Sbjct: 15 KKCIHVMLVYTGGCNGCDIEAVNAVFSPYYDAEQYNVFLTFNPRETDILIVSGCVTKFVK 74 Query: 90 MPALRAYESAPDHKICVSYGACGVGGGIFHD-------LYSVWGGSDTIVPIDVWIPGCP 142 + YE P+ K V+ G+C + GG++ + V G + I+P+DV +PGC Sbjct: 75 ESLRKIYEKIPEPKAVVAIGSCALTGGVYKNIGGDLGTSDFVAGPVENIIPVDVKVPGCA 134 Query: 143 PTPAATIHGFAVALGLLQQK 162 P P I G A+ L+ ++ Sbjct: 135 PRPEDIISGIVKAIPLVVER 154 >UniRef50_B2N3C8 Hydrogenase-4 component I n=2 Tax=Enterobacteriaceae RepID=B2N3C8_ECOLX Length = 124 Score = 167 bits (424), Expect = 3e-40, Method: Composition-based stats. Identities = 119/119 (100%), Positives = 119/119 (100%) Query: 134 IDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIER 193 IDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIER Sbjct: 6 IDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIER 65 Query: 194 EARRLAGYRQGREICDRLLRHLSDDPTGNRVNTWLRDADDPRLNSIVQQLFRVLRGLHD 252 EARRLAGYRQGREICDRLLRHLSDDPTGNRVNTWLRDADDPRLNSIVQQLFRVLRGLHD Sbjct: 66 EARRLAGYRQGREICDRLLRHLSDDPTGNRVNTWLRDADDPRLNSIVQQLFRVLRGLHD 124 >UniRef50_Q64DY8 F420H2-quinone oxidoreductase 45 kD subunit n=8 Tax=Archaea RepID=Q64DY8_9ARCH Length = 788 Score = 167 bits (424), Expect = 3e-40, Method: Composition-based stats. Identities = 48/195 (24%), Positives = 79/195 (40%), Gaps = 10/195 (5%) Query: 27 LQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTR 86 + S + + C +E+ +D ER G + R A+ ++ G +TR Sbjct: 23 RWATKWSLWPCHFLT---SCCGVELAHTGACGYDMERLGTLNMGISRQANFIMVEGTITR 79 Query: 87 AMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPA 146 M +E PD K G CG GGIF + Y++ SD IVP+D +IPGCP TP Sbjct: 80 KMARALRIVWEQMPDPKFVNVIGTCGQRGGIFWNSYNITRPSD-IVPVDFFIPGCPITPE 138 Query: 147 ATIHGFAVALGLLQQK----IHAVDYRDPTGVTMQPLWPQIPP--SQRIAIEREARRLAG 200 + + G ++ + I P+G + P P + + + R Sbjct: 139 SLLRGVRAVQEKIEGRDNTTIRFKHVELPSGDGEENRAPTTPKIFAPTPLVRVDVPRDVD 198 Query: 201 YRQGREICDRLLRHL 215 + G+++ L L Sbjct: 199 WAFGKDLVKNLKAQL 213 >UniRef50_A0L9R6 Membrane bound protein complex subunit mbxJ n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9R6_MAGSM Length = 213 Score = 167 bits (423), Expect = 3e-40, Method: Composition-based stats. Identities = 36/135 (26%), Positives = 71/135 (52%), Gaps = 1/135 (0%) Query: 27 LQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTR 86 L + RS ++ + G IE+ +TP FDA R+G++ ++PR +++ + +G ++ Sbjct: 46 LFNWARSNSIWVLGFG-TGCGAIEMRPLMTPRFDAYRYGVQWRATPRQSNLFIVSGYLSV 104 Query: 87 AMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPA 146 +RAYE K + G+C + GG++ D Y+ D +P+D+++ GC P P Sbjct: 105 KTLKRVVRAYEQMQSPKYVMGLGSCTINGGMYWDSYNTIKQLDDYLPVDLYVTGCMPRPE 164 Query: 147 ATIHGFAVALGLLQQ 161 A + G ++++ Sbjct: 165 ALLSGIEALKKIIRE 179 >UniRef50_Q58758 Uncharacterized protein MJ1363 n=17 Tax=Euryarchaeota RepID=Y1363_METJA Length = 151 Score = 167 bits (423), Expect = 3e-40, Method: Composition-based stats. Identities = 50/137 (36%), Positives = 77/137 (56%), Gaps = 8/137 (5%) Query: 31 RRSAYVYRVDCGGCNACEIEI-FAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMR 89 ++ +V V GGCNAC+IE+ A +P +DAE++ + + +PR ADIL+ TG VT+ + Sbjct: 11 KKCIHVMLVYTGGCNACDIEVVNAIFSPFYDAEQYNVFLTFNPREADILVVTGCVTKVVA 70 Query: 90 MPALRAYESAPDHKICVSYGACGVGGGIFHD-------LYSVWGGSDTIVPIDVWIPGCP 142 + YE P+ K V+ GAC + GG++ + V G + I+P+DV +PGC Sbjct: 71 ESLRKIYEKIPEPKAVVAVGACALMGGVYKNIGGDLGTSDFVAGPVENIIPVDVKVPGCA 130 Query: 143 PTPAATIHGFAVALGLL 159 P P I G AL + Sbjct: 131 PRPEDIIAGIVKALPKV 147 >UniRef50_C1XWY8 Ni,Fe-hydrogenase III small subunit n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XWY8_9DEIN Length = 290 Score = 166 bits (421), Expect = 5e-40, Method: Composition-based stats. Identities = 52/139 (37%), Positives = 74/139 (53%) Query: 33 SAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPA 92 + V G + E+ A P D RFG VV+SPRHAD LL TG V++ MR Sbjct: 127 TLAFREVSAGNTGLDDTEVALAGNPFHDMSRFGFSVVASPRHADALLVTGPVSQNMREAL 186 Query: 93 LRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGF 152 R Y++ P+ K V+ G +GG IF + +V GG D +VP+DV++PG P PA+ +HG Sbjct: 187 WRTYQATPEPKGVVAVGNEAIGGEIFAESAAVVGGVDQVVPVDVYVPGSPARPASILHGL 246 Query: 153 AVALGLLQQKIHAVDYRDP 171 + G QQ + + Sbjct: 247 LLLSGQTQQVLVGGRLHEE 265 >UniRef50_B1ZSE7 NADH ubiquinone oxidoreductase 20 kDa subunit n=19 Tax=Bacteria RepID=B1ZSE7_OPITP Length = 285 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 53/148 (35%), Positives = 78/148 (52%), Gaps = 7/148 (4%) Query: 1 MSPVLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFD 60 + + V LDE+ +KM RS + +V GG A E ++ T +D Sbjct: 128 LGAPGQEEVRLAAALDEKLRKM-------FGRSLRLRQVSAGGSGAEEADLNVLGTIGWD 180 Query: 61 AERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHD 120 RFGI+ V+SPRHAD L+ TG V++ M + + +E+ P KI ++ GA + GG+F Sbjct: 181 LGRFGIQFVASPRHADGLVVTGPVSKGMELALRKTWEAMPAPKIVIAVGAEAISGGVFAG 240 Query: 121 LYSVWGGSDTIVPIDVWIPGCPPTPAAT 148 V G D IVP+D++IPG PP P Sbjct: 241 HPQVRNGVDAIVPVDLYIPGWPPHPLTI 268 >UniRef50_A4WJL4 NADH-quinone oxidoreductase, B subunit n=6 Tax=Thermoproteaceae RepID=A4WJL4_PYRAR Length = 196 Score = 163 bits (414), Expect = 4e-39, Method: Composition-based stats. Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 4/145 (2%) Query: 18 QTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADI 77 + K+++ +R S + + + C +E+ P FDAER+G+ + R +++ Sbjct: 18 KKAKLEKIFNWGVRWSLWPVHLVT---SCCGVEVAHTSGPGFDAERWGVLPFHTMRQSNV 74 Query: 78 LLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVW 137 +L G +TR M YE P+ K ++ GAC V GG+F + Y V + V+ Sbjct: 75 ILVEGTITRKMAKVLKMVYEQMPEPKFVLAMGACAVRGGLFWNSYHVVQVDTVVPVD-VY 133 Query: 138 IPGCPPTPAATIHGFAVALGLLQQK 162 I GCPPTP A + F + ++ K Sbjct: 134 IAGCPPTPEAVVRAFIMLHNKIKGK 158 >UniRef50_A3DM92 NADH-quinone oxidoreductase, B subunit n=1 Tax=Staphylothermus marinus F1 RepID=A3DM92_STAMF Length = 179 Score = 163 bits (413), Expect = 4e-39, Method: Composition-based stats. Identities = 51/172 (29%), Positives = 78/172 (45%), Gaps = 12/172 (6%) Query: 32 RSAYVYRVDCGGCNAC-EIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRM 90 RS ++ C+AC IE+ + DAER+GI SPR AD+L+ G VT+ Sbjct: 18 RSIWMIHY----CSACGAIELPPNMMAPLDAERWGIMPAPSPRQADVLVIMGYVTKKTLK 73 Query: 91 PALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIH 150 +R Y P+ + + C GG++ D YS D +P+DVW+PGC P + Sbjct: 74 VLMRLYHQMPEPRYVMVGCNCPATGGLYWDSYSTVKAVDEFLPVDVWVPGCMPRAEDWLQ 133 Query: 151 GFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIEREARRLAGYR 202 GF L++KI +P V ++ + IE + +A R Sbjct: 134 GFL----KLRKKISEGRIVNPRPVEEPGELEELIYRE---IEMREKMMAKVR 178 >UniRef50_A3ETD3 Putative hydrogenase-3 (HycG) n=3 Tax=Leptospirillum RepID=A3ETD3_9BACT Length = 169 Score = 163 bits (412), Expect = 5e-39, Method: Composition-based stats. Identities = 50/155 (32%), Positives = 72/155 (46%), Gaps = 6/155 (3%) Query: 1 MSPVLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFD 60 + L P+ D + S + VD G CNACE+E+ A + Sbjct: 9 LKTGLLTEARPPLPPDASAP------FLPVGGSLSIRHVDAGSCNACELELHAMNGSYYA 62 Query: 61 AERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHD 120 ER GI+ V+SPRHAD+LL TG V+ M P L +E+ K ++ G C GG+F Sbjct: 63 PERDGIRFVASPRHADLLLVTGPVSCQMEQPLLDTHEAMASPKTVLAVGDCACQGGVFRG 122 Query: 121 LYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVA 155 +V G D + P +PGCPP+P+ + Sbjct: 123 SPAVRNGVDGLFPEARKVPGCPPSPSDILRALRGL 157 >UniRef50_B5ZJ00 NADH ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZJ00_GLUDA Length = 166 Score = 160 bits (406), Expect = 3e-38, Method: Composition-based stats. Identities = 49/134 (36%), Positives = 73/134 (54%) Query: 25 HLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAV 84 L R V+ V+ GGC C +E+ A + GI V++PR A++LL TG + Sbjct: 16 RLPVTGARPLAVFHVETGGCEGCAMEVAALDGAAYGLPATGIAFVATPRLAEVLLVTGPL 75 Query: 85 TRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPT 144 TRAM A+ + P+ + V+ GAC + GG F + Y+V GG + +D+ +PGCPP+ Sbjct: 76 TRAMAPVLEAAWHAMPEPRALVAVGACAIDGGPFPENYAVLGGLEGRATLDMTVPGCPPS 135 Query: 145 PAATIHGFAVALGL 158 PAA + G A L Sbjct: 136 PAAILAGLARVLER 149 >UniRef50_UPI0001C31273 NADH-quinone oxidoreductase, B subunit n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31273 Length = 229 Score = 159 bits (403), Expect = 6e-38, Method: Composition-based stats. Identities = 43/145 (29%), Positives = 67/145 (46%), Gaps = 11/145 (7%) Query: 43 GCNACEIEIFAAITPVFDAERFGIK-VVSSPRHADILLFTGAVTRAMRMPALRAYESAPD 101 G C IE+ + D RFG + +SPR AD+L+ +G V+ M R Y+ + Sbjct: 71 GLACCAIEMMSLPGARLDIGRFGFEAFRASPRQADMLILSGRVSIKMAPIVRRIYDQMLE 130 Query: 102 HKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGL--- 158 + +S GAC G+F + Y++ +D +PIDV +PGCPP P A H Sbjct: 131 PRWAISMGACCSSMGVF-NNYALV-PADKFMPIDVHVPGCPPRPEALAHAILKLRSKVHG 188 Query: 159 -----LQQKIHAVDYRDPTGVTMQP 178 +++ AV + G +P Sbjct: 189 NPPAGWRERYEAVGTEEVVGAADRP 213 >UniRef50_D2PJN5 NADH ubiquinone oxidoreductase, 20 kDa subunit n=9 Tax=Sulfolobus RepID=D2PJN5_SULIS Length = 201 Score = 158 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 44/131 (33%), Positives = 66/131 (50%), Gaps = 12/131 (9%) Query: 30 IRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMR 89 +RS Y+Y +D G C C +E+ +P +D RF I ++PRHAD L+ G +T M+ Sbjct: 81 FKRSFYLYPIDSGTCGGCNMELKLISSPEYDMTRFSIFFTNTPRHADALVVMGVMTEKMK 140 Query: 90 MPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPID--VWIPGCPPTPAA 147 +AYE+ P+ K+ + GAC + GGI + VP++ V I GCPP P Sbjct: 141 EVLKKAYEAMPEPKVVILLGACAISGGIIGEG----------VPLEAVVEISGCPPNPFT 190 Query: 148 TIHGFAVALGL 158 + G Sbjct: 191 ILEALMKVKGK 201 >UniRef50_D1B297 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B297_SULD5 Length = 138 Score = 158 bits (400), Expect = 1e-37, Method: Composition-based stats. Identities = 53/137 (38%), Positives = 76/137 (55%), Gaps = 1/137 (0%) Query: 30 IRRSAYVYRVDCGGCNACEIEIFAA-ITPVFDAERFGIKVVSSPRHADILLFTGAVTRAM 88 + + YVYR++ G CN C++EI A+ + P F + G + P A+ILL TGA+T Sbjct: 1 MNDTLYVYRINTGSCNGCDVEILASVLLPKFGFDALGCVYTNDPTLANILLVTGAITARS 60 Query: 89 RMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAAT 148 A + P KI V+ G C + GG+F D Y++ G DT V +DV I GCPP+P Sbjct: 61 TPYLQAALKQLPSKKIVVALGICPISGGVFRDSYAITGPLDTFVDVDVNISGCPPSPKEI 120 Query: 149 IHGFAVALGLLQQKIHA 165 G A A L +++ HA Sbjct: 121 AQGLAQACELWRERYHA 137 >UniRef50_Q978D5 Formate hydrogenlyase subunit 2 n=2 Tax=Thermoplasmatales RepID=Q978D5_THEVO Length = 222 Score = 158 bits (400), Expect = 1e-37, Method: Composition-based stats. Identities = 52/159 (32%), Positives = 82/159 (51%), Gaps = 7/159 (4%) Query: 14 TLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPR 73 T D++ +K+ RRS +V+ +D G C AC +E + +P +DA R GI +V++PR Sbjct: 70 TGDQRIFTIKKT-EDTFRRSFHVFPIDSGACGACNMEFLSIFSPQYDANRLGIFMVNTPR 128 Query: 74 HADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVP 133 +AD L+ G +T M+ RAYE+ P+ K+ ++ GAC V GGI + D Sbjct: 129 YADALIVMGVMTPGMKEALDRAYEAMPEPKLVIAMGACAVTGGIMGE-----NPLDR-EK 182 Query: 134 IDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPT 172 +V I GCPP+P I A+ ++ + R Sbjct: 183 YNVEIAGCPPSPYTLIAALNAAMKDKRKADYFESKRQEV 221 >UniRef50_A4YGN5 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Metallosphaera sedula DSM 5348 RepID=A4YGN5_METS5 Length = 203 Score = 157 bits (398), Expect = 2e-37, Method: Composition-based stats. Identities = 46/141 (32%), Positives = 67/141 (47%), Gaps = 8/141 (5%) Query: 17 EQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHAD 76 E +RS Y+Y +D G C C +E+ +P +D RFGI ++P+HAD Sbjct: 67 ETLTPRVERSDVTFKRSFYLYPLDAGSCGGCNLELRLISSPQYDMTRFGIFFTNTPKHAD 126 Query: 77 ILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDV 136 LL G + + M RAY+ P K+ + G C + GG+ + G DV Sbjct: 127 ALLIMGNLGKRMEEVIRRAYDVIPSPKLVILLGTCAISGGVTGIPPDIRG--------DV 178 Query: 137 WIPGCPPTPAATIHGFAVALG 157 +PGCPPTPA+ + A G Sbjct: 179 IVPGCPPTPASILDALIKAKG 199 >UniRef50_Q6C2Q1 YALI0F06050p n=1 Tax=Yarrowia lipolytica RepID=Q6C2Q1_YARLI Length = 216 Score = 157 bits (397), Expect = 4e-37, Method: Composition-based stats. Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 3/131 (2%) Query: 4 VLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAER 63 L +D + + S + G C +E+ P +D +R Sbjct: 46 PLPSQQKPNSAVDYTLTTLDAVANWARQGSFWPVTF---GLACCAVEMMHVSAPRYDQDR 102 Query: 64 FGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYS 123 GI +SPR +DI++ G +T M + Y+ P+ + +S G+C GGG +H YS Sbjct: 103 LGIIFRASPRQSDIMIVAGTLTNKMAPVLRQVYDQMPEPRWVISMGSCANGGGYYHFSYS 162 Query: 124 VWGGSDTIVPI 134 V G D IVP+ Sbjct: 163 VVRGCDRIVPV 173 >UniRef50_B5ICA0 NADH ubiquinone oxidoreductase, 20 Kd subunit family n=2 Tax=Aciduliprofundum boonei T469 RepID=B5ICA0_9EURY Length = 179 Score = 155 bits (392), Expect = 1e-36, Method: Composition-based stats. Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 12/144 (8%) Query: 16 DEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHA 75 +E+ K++ +S +++ +D G C++C EI +P +D R G PRHA Sbjct: 46 EERDDKIEVRRKIPFNKSVHIFVLDVGSCSSCNREISLLNSPQYDLHRLGFFFTPVPRHA 105 Query: 76 DILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPID 135 DILL G T M AYE P+ KI ++ GAC + I+ +D Sbjct: 106 DILLVIGEPTEKMIPVLKEAYEQMPEPKIVMTAGACAN------------EKIEKIIKVD 153 Query: 136 VWIPGCPPTPAATIHGFAVALGLL 159 + GCPP P A + + G Sbjct: 154 ARVSGCPPQPIAILKALLMLTGRW 177 >UniRef50_A8A9X3 NADH-quinone oxidoreductase, B subunit n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8A9X3_IGNH4 Length = 207 Score = 154 bits (389), Expect = 3e-36, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 62/155 (40%), Gaps = 13/155 (8%) Query: 17 EQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHAD 76 +++ +K L R S ++ + G C IE+ A D ER G+ ++PR D Sbjct: 15 KKSAPVKEALKWSRRNSLWLLHL---GIMCCAIEMMQAAFAFHDFERLGVLARATPRQVD 71 Query: 77 ILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIV---P 133 ++L G V R + R + P + + G C + GG + V G ++ P Sbjct: 72 VILINGPVNRKLAERLRRLFMQTPGPRFVIVMGECAINGGPWWQSDYVLDGIHEVIESLP 131 Query: 134 I----DVWI---PGCPPTPAATIHGFAVALGLLQQ 161 DV + GCPP P + L+ + Sbjct: 132 EEYRKDVHVVNLAGCPPRPEGLLRAILKMEELINE 166 >UniRef50_A6DAC3 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DAC3_9PROT Length = 140 Score = 150 bits (379), Expect = 4e-35, Method: Composition-based stats. Identities = 42/134 (31%), Positives = 71/134 (52%), Gaps = 1/134 (0%) Query: 34 AYVYRVDCGGCNACEIEIFAAITP-VFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPA 92 ++R++ G CN C++EI A++ FD ++ G + + + ADI + TG VT Sbjct: 7 PKIFRINTGSCNGCDVEIAASVMSSRFDLQKLGCEYIETSEDADIFMITGPVTARSLPFL 66 Query: 93 LRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGF 152 ++ + +S G C V GIF D Y + G D+ V +DV + GCPP P A + G Sbjct: 67 KEVIKNHKKPYVVISLGTCSVTCGIFRDSYPILGPVDSYVNVDVNVAGCPPRPQAILEGV 126 Query: 153 AVALGLLQQKIHAV 166 A+ +L++K + + Sbjct: 127 KTAIDILKRKNNEI 140 >UniRef50_A5FW77 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FW77_ACICJ Length = 164 Score = 149 bits (376), Expect = 9e-35, Method: Composition-based stats. Identities = 44/128 (34%), Positives = 61/128 (47%) Query: 30 IRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMR 89 + RS V VD G C CEIEI A GI +V R ADILL TG TR + Sbjct: 22 LGRSLAVRHVDAGSCGGCEIEIAACRRLRGGMAAHGIAMVEDLRAADILLVTGVATRNLA 81 Query: 90 MPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATI 149 ++ + V+ G C + GG+F + +V GG ++P+D+ I GCPP P + Sbjct: 82 EAVRKSLAGMAPPRFVVAAGDCALDGGVFKGVPAVLGGVQAVIPVDLLIAGCPPAPRQIL 141 Query: 150 HGFAVALG 157 G + Sbjct: 142 AGLVALVE 149 >UniRef50_Q2WGH7 NADH dehydrogenase subunit K (Fragment) n=1 Tax=Selaginella uncinata RepID=Q2WGH7_SELUN Length = 215 Score = 147 bits (370), Expect = 4e-34, Method: Composition-based stats. Identities = 44/140 (31%), Positives = 66/140 (47%), Gaps = 2/140 (1%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDH 102 G + C E I D++R G SSPR AD+++ G T M +R+YE P+ Sbjct: 65 GTSCCFTEFAPLIGSRSDSDRHGSVPRSSPRQADLIITAGTATTKMAPSLVRSYEQTPEP 124 Query: 103 KICVSYGACGVGGGIFH-DLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQ 161 K ++ GAC V GG+ D +S G D +P D + PG PP P A + + + Sbjct: 125 KHAIAMGACTVTGGMLSTDPHSTVRGVDKSIPADTYPPGRPPKPEAIVDATIKPREKVSR 184 Query: 162 KIHAVDYRDPTGVTMQPLWP 181 + + +YRD + L P Sbjct: 185 ETY-DNYRDKLREGNRFLTP 203 >UniRef50_B8D5A0 NADH-quinone oxidoreductase, B subunit n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D5A0_DESK1 Length = 337 Score = 145 bits (367), Expect = 1e-33, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 74/193 (38%), Gaps = 15/193 (7%) Query: 22 MKRHLLQDIRRSAYVYRVDCGGCNAC-EIEIFAAITPVFDAERFGIKVVSSPRHADILLF 80 ++R RS ++ C+AC +E + D ER+G SPR +D+ + Sbjct: 2 LERIARWAYARSLWMIHY----CSACGAVEFPPLVMAPLDWERYGYMPTPSPRQSDLYIG 57 Query: 81 TGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPG 140 G +T+ L Y P+ K+ ++ C GG + D Y+ + D + ++ W+PG Sbjct: 58 MGYLTKKTVKLVLNMYRQMPEPKLVLAGCNCTSTGGPYWDSYATYKRLDDFIEVEGWVPG 117 Query: 141 CPPTPAATIHGFAVALGLLQQ--------KIHAVDYRDPTGVTMQPLWPQIPPSQRIAIE 192 C P P + L + KI ++ + + ++I + Sbjct: 118 CMPMPDDYLSMIEYVRKDLGKRPLNAYVSKIKPDAFKKISEWEELEKQWRKEYEEKI--K 175 Query: 193 REARRLAGYRQGR 205 ++ + Y Sbjct: 176 EDSSKPVSYEFKE 188 >UniRef50_Q6L0U2 Formate hydrogenlyase subunit 7 n=1 Tax=Picrophilus torridus RepID=Q6L0U2_PICTO Length = 202 Score = 142 bits (358), Expect = 1e-32, Method: Composition-based stats. Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 8/135 (5%) Query: 22 MKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFT 81 + + + R+S +Y +D G C AC E+F+ P +D R+ I ++PRHAD ++ + Sbjct: 75 ISGSIDKKFRKSLNIYSIDSGTCGACNSELFSISIPEYDLTRYHIFFTNTPRHADAIILS 134 Query: 82 GAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGC 141 G +M+ A + P + GAC + GGI GS + + IPGC Sbjct: 135 GIYNESMKDVIDNALGAMPKPGYLILLGACALSGGII--------GSGHEIKAVLEIPGC 186 Query: 142 PPTPAATIHGFAVAL 156 PP P + G + Sbjct: 187 PPNPYTILKGLRRLM 201 >UniRef50_B0SCU6 Metal (Ni/Fe) hydrogenase, small subunit n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SCU6_LEPBA Length = 273 Score = 140 bits (352), Expect = 5e-32, Method: Composition-based stats. Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 14/165 (8%) Query: 5 LTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERF 64 + ++ TL E Q+ R L + +R V GG N E E+ A+ VFD+ER Sbjct: 113 MEKNSQSNFTLSEN-QRQFRDLTK--KRGFLYREVAAGGNNTVESELNASFNSVFDSERE 169 Query: 65 GIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSV 124 GI+ V+SP+HAD ++F+G ++ M P A++ + + ++ G V GG+F Sbjct: 170 GIRCVASPKHADTIVFSGPISEQMEGPLQTAWDVLSEPRALIACGTEAVSGGLFP----- 224 Query: 125 WGGSDTIVPIDVWIPGCPPTPAATIHGFAVALG----LLQQKIHA 165 G P D++I G PP P + GF + +G Q+ +H Sbjct: 225 -KGKIPKEP-DLYISGDPPRPDVILQGFRLLIGRFSFQFQEALHK 267 >UniRef50_A0LSU0 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LSU0_ACIC1 Length = 269 Score = 138 bits (348), Expect = 2e-31, Method: Composition-based stats. Identities = 52/146 (35%), Positives = 75/146 (51%), Gaps = 18/146 (12%) Query: 33 SAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPA 92 S +V VD G A E E+ A + PV+D R GI +SPRHAD+LL TG +R M P Sbjct: 124 SIHVRHVDAGSDGADEWEVLALLNPVYDIHRLGIFFTASPRHADVLLVTGVGSRGMAAPL 183 Query: 93 LRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIV------------------PI 134 R ++AP + ++ G + GG+ H Y+ GG ++ + Sbjct: 184 ARTLQAAPRPLVVIAAGTDAISGGLVHPTYATSGGIGDLIAATPDSAGATGAADGDPVRV 243 Query: 135 DVWIPGCPPTPAATIHGFAVALGLLQ 160 D+W+PG PPTP A +H +A+G LQ Sbjct: 244 DIWVPGSPPTPFALLHALLLAMGRLQ 269 >UniRef50_Q5FU78 Putative uncharacterized protein n=1 Tax=Gluconobacter oxydans RepID=Q5FU78_GLUOX Length = 161 Score = 136 bits (342), Expect = 9e-31, Method: Composition-based stats. Identities = 43/124 (34%), Positives = 60/124 (48%) Query: 32 RSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMP 91 R +Y ++ GGC C +EI + F E+ G VS P AD LL TGAVTR Sbjct: 35 RPIGLYVLEAGGCEGCFMEIESLNGSAFALEQAGFVCVSDPADADWLLLTGAVTRVCAEM 94 Query: 92 ALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHG 151 R + + P + ++ GAC V GG F Y+ GG + + P+ I GCPP+P + Sbjct: 95 VDRVWRAMPPGRSLIAVGACAVDGGPFPAGYATLGGLEALTPVRRSIAGCPPSPDDILRA 154 Query: 152 FAVA 155 Sbjct: 155 LQEL 158 >UniRef50_Q0BPG7 Formate hydrogenlyase subunit 7 n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BPG7_GRABC Length = 174 Score = 135 bits (339), Expect = 2e-30, Method: Composition-based stats. Identities = 39/151 (25%), Positives = 67/151 (44%), Gaps = 1/151 (0%) Query: 6 TQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFG 65 T + T+ + + + ++ + V+ GG +AC +E+ A R G Sbjct: 18 TASLPHAETVAALIARRRSSARPKLGQALSILHVESGGGSACLLELEALRAAPGLLARHG 77 Query: 66 IKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVW 125 ++ V+SP HADILL TG + +A+E+ P + ++ G G G+ Y+ Sbjct: 78 LRFVTSPLHADILLITGDGCHNLTSAIHQAWEAMPGPRWAIAVGDGAAGDGLLRGSYAST 137 Query: 126 GGSDTIVPIDVWIPGCPPTPAATIHGFAVAL 156 G + I P D+ IPG PP + G + Sbjct: 138 GNMEEI-PFDLVIPGSPPAADTILSGLRALV 167 >UniRef50_Q04P25 Metal (Ni/Fe) hydrogenase, small subunit n=4 Tax=Leptospira RepID=Q04P25_LEPBJ Length = 273 Score = 125 bits (315), Expect = 1e-27, Method: Composition-based stats. Identities = 47/150 (31%), Positives = 71/150 (47%), Gaps = 7/150 (4%) Query: 11 QPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVS 70 + +T+++KR + V G N E EI A+ +FD+E I+VV+ Sbjct: 113 PDEKPEMETEEVKRFRKTTKKTGFQFREVAASGNNTTEAEINASFNALFDSEASKIRVVA 172 Query: 71 SPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDT 130 SP+HAD L+++G V M P A+E+ P K V+ G+ V GG+F G Sbjct: 173 SPKHADALVYSGPVGPNMEEPLNTAWETMPSPKALVACGSEAVSGGLFK------LGKLP 226 Query: 131 IVPIDVWIPGCPPTPAATIHGFAVALGLLQ 160 P D++I G PP P I F +G + Sbjct: 227 KEP-DLFIGGDPPRPDVIISAFRYLMGTRE 255 >UniRef50_B9SD17 NADH-ubiquinone oxidoreductase I subunit j, putative n=1 Tax=Ricinus communis RepID=B9SD17_RICCO Length = 188 Score = 117 bits (293), Expect = 4e-25, Method: Composition-based stats. Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 4/123 (3%) Query: 88 MRMPALRAYESAPDHKICVSYGACGVGGGIFH-DLYSVWGGSDTIVPIDVWIPGCPPTPA 146 M +R YE P+ K ++ GAC + GG+F D YS G D ++P+D ++ GCPP P Sbjct: 1 MAPSLVRLYEQIPEPKYVIAMGACTITGGMFSTDSYSTIRGVDKLIPVDAYLSGCPPKPE 60 Query: 147 ATIHGFAVALGLLQQKIHAVDYR-DPTGVTMQPLWPQIPPSQRI--AIEREARRLAGYRQ 203 A I L ++I+ R P + L + RI I++ Sbjct: 61 AVIDAITKLRKKLSREIYEDRIRSQPENRSSGGLLASVYHLTRIEYGIDQPEEVCIKVFA 120 Query: 204 GRE 206 R+ Sbjct: 121 PRK 123 >UniRef50_Q2H7B9 Putative uncharacterized protein n=1 Tax=Chaetomium globosum RepID=Q2H7B9_CHAGB Length = 189 Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats. Identities = 37/160 (23%), Positives = 58/160 (36%), Gaps = 52/160 (32%) Query: 10 SQPITLDEQTQKMKRHLLQDIRR-SAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKV 68 +P ++ E L+ R+ S + G C IE+ P +D +R GI Sbjct: 73 KRPNSVTEYALSTLDGLINWARQGSLWPMSF---GLACCAIEMMHLSMPRYDNDRQGIIF 129 Query: 69 VSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGS 128 +SPR +D+++ G G Sbjct: 130 RASPRQSDVMIVAG--------------------------------------------GV 145 Query: 129 DTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDY 168 D IVP+D+++PGCPPT A +G LQ+K+ A Sbjct: 146 DRIVPVDIYVPGCPPTAEALQYGIF----QLQKKMAAGQR 181 >UniRef50_UPI000194DF39 PREDICTED: similar to NADH-ubiquinone oxidoreductase Fe-S protein 7 n=1 Tax=Taeniopygia guttata RepID=UPI000194DF39 Length = 183 Score = 105 bits (261), Expect = 2e-21, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 54/167 (32%), Gaps = 45/167 (26%) Query: 2 SPVLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDA 61 S V+ + P + E L+ RRS+ G C +E+ P +D Sbjct: 55 SAVVPRKSYVPSSRGEYVIAKLDDLVNWARRSSLWPMTF--GLACCAVEMMHMAAPRYDM 112 Query: 62 ERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDL 121 +RFG+ +SPR AD+++ G +T M + Sbjct: 113 DRFGVVFRASPRQADVMIVAGTLTNKMAPALRKK-------------------------- 146 Query: 122 YSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDY 168 G CPPT A ++G LQ+KI Sbjct: 147 PPCRGR-------------CPPTAEALLYGIL----QLQRKIKREKR 176 >UniRef50_Q9H3K5 My017 protein n=3 Tax=Eukaryota RepID=Q9H3K5_HUMAN Length = 214 Score = 95.0 bits (235), Expect = 2e-18, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 2/92 (2%) Query: 3 PVLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAE 62 P +P + E L+ RRS+ G C +E+ P +D + Sbjct: 47 PKARAVAPKPSSRGEYVVAKLDDLVNWARRSSLWPMTF--GLACCAVEMMHMAAPRYDMD 104 Query: 63 RFGIKVVSSPRHADILLFTGAVTRAMRMPALR 94 RFG+ +SPR +D+++ G +T M + Sbjct: 105 RFGVVFRASPRQSDVMIVAGTLTNKMAPALRK 136 >UniRef50_UPI0000EC9F96 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (NADH-ubiquinone oxidoreductase 20 kDa subunit) (Complex I-20kD) (CI-20kD) (PSST subunit). n=1 Tax=Gallus gallus RepID=UPI0000EC9F96 Length = 176 Score = 89.3 bits (220), Expect = 1e-16, Method: Composition-based stats. Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 4/68 (5%) Query: 100 PDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLL 159 P+ + +C GGG +H YSV G D IVP+D+++PGCPPT A ++G L Sbjct: 105 PELCFTNIFCSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGIL----QL 160 Query: 160 QQKIHAVD 167 Q+KI Sbjct: 161 QKKIKRER 168 >UniRef50_B7QG38 NADH-plastoquinone oxidoreductase, putative n=1 Tax=Ixodes scapularis RepID=B7QG38_IXOSC Length = 162 Score = 88.5 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 30/48 (62%) Query: 93 LRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPG 140 + Y+ + + +S G+C GGG +H YSV G D I+P+D+++PG Sbjct: 78 RKVYDQMLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPG 125 >UniRef50_UPI0000E81815 PREDICTED: hypothetical protein n=1 Tax=Gallus gallus RepID=UPI0000E81815 Length = 187 Score = 83.9 bits (206), Expect = 5e-15, Method: Composition-based stats. Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 4/57 (7%) Query: 111 CGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVD 167 C GGG +H YSV G D IVP+D+++PGCPPT A ++G LQ+KI Sbjct: 127 CANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGIL----QLQKKIKRER 179 >UniRef50_C1GND6 NADH-ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Paracoccidioides brasiliensis Pb01 RepID=C1GND6_PARBA Length = 159 Score = 81.9 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 3/77 (3%) Query: 16 DEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHA 75 +E+ + + + S + G C +E+ A P +D +R G +SPR + Sbjct: 36 EEKNGSIDKVVNWAREGSLWPLSF---GLACCNMEMMAVSMPRYDQDRLGTIFRASPRQS 92 Query: 76 DILLFTGAVTRAMRMPA 92 D+++ AVT+ Sbjct: 93 DVIIVADAVTKQDGPRL 109 >UniRef50_Q6A6I9 NADH dehydrogenase subunit n=2 Tax=Propionibacterium acnes RepID=Q6A6I9_PROAC Length = 132 Score = 76.2 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 3/75 (4%) Query: 77 ILLFTGAVTRAMRMPALRAYESAPD--HKICVSYGACGVGGGIFHDLYSVWGGS-DTIVP 133 ++L +G VT + V++GAC GG + D V G D V Sbjct: 47 VVLVSGTVTTGLAPVVSDTVHELKRNHPVDVVAFGACACAGGPYWDSAGVVAGLPDAGVD 106 Query: 134 IDVWIPGCPPTPAAT 148 D WIPGCPP P Sbjct: 107 ADHWIPGCPPGPETL 121 >UniRef50_A5UWN9 NADH ubiquinone oxidoreductase, 20 kDa subunit n=2 Tax=Roseiflexus RepID=A5UWN9_ROSS1 Length = 127 Score = 73.5 bits (179), Expect = 6e-12, Method: Composition-based stats. Identities = 30/133 (22%), Positives = 50/133 (37%), Gaps = 10/133 (7%) Query: 36 VYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRA 95 VYR + G C C++E+ AA+ I ++P AD+LL TG +T + + Sbjct: 4 VYRFNTGSCGGCDLEVIAALAAA-----ADIDWAATPHEADVLLLTGPLTTDTKKAFMAL 58 Query: 96 YESAPDHKICVSYGACGVGGGIF-HDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAV 154 + ++ G C + G F +V + +D GCPPTP + Sbjct: 59 LQELDHRAPIIAVGRCAIDGHPFGRGGVAVIPNLTVHLSLD----GCPPTPTQIVEAIRT 114 Query: 155 ALGLLQQKIHAVD 167 + Sbjct: 115 IAMDREDGAAGER 127 >UniRef50_C7J5D7 Os07g0116900 protein n=3 Tax=Oryza sativa RepID=C7J5D7_ORYSJ Length = 114 Score = 69.6 bits (169), Expect = 9e-11, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 23/52 (44%) Query: 44 CNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRA 95 C +E+ A +D +RF + SPR +D ++ G +T M + Sbjct: 58 LAYCAVEMMHAGASCYDFDRFRVIFRPSPRQSDCMIIVGTLTNKMGPALGKT 109 >UniRef50_P80491 Coenzyme F420 hydrogenase subunit gamma n=27 Tax=Euryarchaeota RepID=FRHG_METBF Length = 259 Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 57/170 (33%), Gaps = 25/170 (14%) Query: 32 RSAYVYRVDCGGCNACEIEIFA-------AITPVFDAERFGIKVVSSPRH---ADILLFT 81 + V GC C + + + D ++ RH D+ L Sbjct: 3 NKIKIGHVHMSGCTGCLVSLADNNLGLIKILDDYADL--VYCLTLADVRHIPEMDVALVE 60 Query: 82 GAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDL---------YSVWGGSDTIV 132 G+V E+ KI V+ G+C G I + + ++ Sbjct: 61 GSVCLQDHESVEDIKETRKKSKIVVALGSCACYGNITRFSRGGQHNQPQHESYLPIGDLI 120 Query: 133 PIDVWIPGCPPTPAAT----IHGFAVALGLLQQKIHAVDYRDPTGVTMQP 178 +DV+IPGCPP+P + + + G +QK A Y P + Sbjct: 121 DVDVYIPGCPPSPELIRNVAVMAYLLLEGNEEQKELAGKYLKPLMDLAKR 170 >UniRef50_A6UVU9 Coenzyme F420 hydrogenase n=2 Tax=Euryarchaeota RepID=A6UVU9_META3 Length = 227 Score = 66.2 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 36/138 (26%), Positives = 51/138 (36%), Gaps = 21/138 (15%) Query: 36 VYRVDCGGCNACEIEIFAAITPVFDAERFGIK------VVSSPRH---ADILLFTGAVTR 86 V V C C + + + D G ++ R ADI+L G+V Sbjct: 4 VAHVQLSSCCGCLVSLTDTYEKLLDV--LGAIDLVYSQTIADAREIPEADIILVEGSVCL 61 Query: 87 AMRMPALRAYESAPDHKICVSYGACGVGGGIF---------HDLYSVWGGSDTIVPIDVW 137 A + KI V+ GAC GGI ++S + +V D+ Sbjct: 62 DDHHAMEIAQDVGKKAKILVALGACAATGGITRFCRGGQMSKPIHSSFSPITEVVKCDLA 121 Query: 138 IPGCPPTPAATIHGFAVA 155 IPGCPP+P I G A Sbjct: 122 IPGCPPSPE-IIVGLITA 138 >UniRef50_C5A2R7 Coenzyme F420 hydrogenase subunit gamma (FrhG) n=1 Tax=Thermococcus gammatolerans EJ3 RepID=C5A2R7_THEGJ Length = 229 Score = 63.8 bits (154), Expect = 4e-09, Method: Composition-based stats. Identities = 32/131 (24%), Positives = 47/131 (35%), Gaps = 19/131 (14%) Query: 34 AYVYRVDCGGCNACEIEIFAAI---TPVFDAE----RFGIKVVSSPRHADILLFTGAVTR 86 V VD GC C + I A D + R G D+ L TG Sbjct: 7 LKVLHVDFAGCEGCNVSIIRAYPKLMNEIDLDISYLRDGSCQYG---EYDVALITGGACM 63 Query: 87 AMRMPALRAYESAPDHKICVSYGACGVGGGIFHDL---------YSVWGGSDTIVPIDVW 137 E ++ V++G+C GGI + + ++++P+D Sbjct: 64 NEPRILEELKEIREKARVVVAFGSCASLGGILRFARGGQEPRPDHRNFQPINSVIPVDYS 123 Query: 138 IPGCPPTPAAT 148 IPGCPPTP Sbjct: 124 IPGCPPTPQML 134 >UniRef50_C7MNR7 Hydrogenase (NiFe) small subunit HydA n=4 Tax=Coriobacteriaceae RepID=C7MNR7_CRYCD Length = 439 Score = 58.1 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 32/116 (27%), Positives = 47/116 (40%), Gaps = 21/116 (18%) Query: 77 ILLFTGAVTRAMRMPALRA---------YESAPDHKICVSYGACGVGGGIFHDLYSVWG- 126 IL++ GAV ALR E+AP V+ G+C V GG + G Sbjct: 125 ILIYEGAVLEKWGGEALRVAGKPGTEHLLEAAPSANAVVALGSCAVNGGWMGANPNSAGA 184 Query: 127 -GSDTI-------VPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGV 174 G + VP+ V IPGCP P + + + K+ A+DY + + Sbjct: 185 VGVEKFLKESGINVPV-VNIPGCPANPEWLVAVLVDVVMM--NKLPALDYENKPAL 237 >UniRef50_B8G3U7 NADH ubiquinone oxidoreductase 20 kDa subunit n=6 Tax=Bacteria RepID=B8G3U7_CHLAD Length = 177 Score = 58.1 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 36/164 (21%), Positives = 54/164 (32%), Gaps = 60/164 (36%) Query: 42 GGCNACE----------IEIFA----AITPVFDAERFGIKVVSSPRHADILLFTGAVTRA 87 GGC+ C IE+ A +P+ D +RF P H D+ L GA+ Sbjct: 12 GGCSGCHMSLLDLDEWLIELAAQADLVYSPIADVKRF-------PSHVDVTLIEGAIANN 64 Query: 88 MRMPALRAYESAPDHKICVSYGACGVGG-------------------------------- 115 A+ + + KI VS+G C V G Sbjct: 65 --EHLELAHIARRNSKIIVSFGDCAVSGNVTALRNPLGSPEQLLQQVYIEHSDPRGKIPH 122 Query: 116 --GIFHDLYSVWGGSDTIVPIDVWIPGCPPTP---AATIHGFAV 154 GI L ++P+D ++ GCPP+ A + Sbjct: 123 EPGIVPVLLDKVMPVHQVIPVDYYLSGCPPSAPRIRALLEALLT 166 >UniRef50_B6YTV9 Coenzyme F420 hydrogenase gamma subunit n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YTV9_THEON Length = 225 Score = 57.3 bits (137), Expect = 4e-07, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 44/128 (34%), Gaps = 13/128 (10%) Query: 34 AYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPR----HADILLFTGAVTRAMR 89 V VD GGC C + I A + D I + D+ + TG Sbjct: 4 LKVLHVDVGGCEGCNVSIIRAYPKLMDLIELDISYLRKDECKLDEYDVAIITGGACMNEP 63 Query: 90 MPALRAYESAPDHKICVSYGACGVGGGIFHDL---------YSVWGGSDTIVPIDVWIPG 140 E V++G+C GI + + ++++ +D IPG Sbjct: 64 RILEELKEIREKAHTVVAFGSCATFSGILRFCRGGQEPRPDHRNFQPINSVIKVDYSIPG 123 Query: 141 CPPTPAAT 148 CPPTP Sbjct: 124 CPPTPQML 131 >UniRef50_A0LLU1 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LLU1_SYNFM Length = 184 Score = 57.3 bits (137), Expect = 4e-07, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 48/163 (29%), Gaps = 56/163 (34%) Query: 42 GGCNACEIEIFAA--------------ITPVFDAERFGIKVVSSPRHADILLFTGAVTRA 87 GGC C + + +PV D + F P D+ L GA Sbjct: 17 GGCAGCHMSLLDLDERLIDVVGLVDIVYSPVADIKVF-------PEGVDVTLVEGACCN- 68 Query: 88 MRMPALRAYESAPDHKICVSYGACGVGG---------------------GIFHDLYSVWG 126 A+E KI +++G C V G G + Sbjct: 69 -DENVHLAHEVRERSKIVIAFGDCAVTGNVPSMRNRLDRDQMINSVYFEGPGKPPPTSVL 127 Query: 127 G------------SDTIVPIDVWIPGCPPTPAATIHGFAVALG 157 G ++P+D+++PGCPP P L Sbjct: 128 GHFLPTLIPKVLPLHQVIPVDIFLPGCPPDPERIWAAIVALLK 170 >UniRef50_B5YB68 NAD-reducing hydrogenase HoxS delta subunit n=2 Tax=Dictyoglomus RepID=B5YB68_DICT6 Length = 180 Score = 57.3 bits (137), Expect = 5e-07, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 58/184 (31%), Gaps = 57/184 (30%) Query: 34 AYVYRVDCGGCNACEIEIFAAITPVFDAERF------GIKVVSSP--------RHADILL 79 V V C GC+ C + ER G+++ ++P DI + Sbjct: 4 IKVASVWCEGCSGCHMSFLDMD------ERLVELINKGLEINATPITDLKIPDEGTDIGI 57 Query: 80 FTGAV-TRAMRMPALRAYESAPDHKICVSYGACGVGGGI----------------FHDLY 122 GAV T E KI V+ G C V GGI + Sbjct: 58 IEGAVATDHHEEEVKMMRERC---KIIVALGDCAVFGGIPTMRNYIPREELLERGYITTE 114 Query: 123 SVWGG-----------------SDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHA 165 S G + ++ +D+++PGCPP+ A + L K+ Sbjct: 115 STVDGKIPTSPEIGKHLPKTKAVNEVIKVDLYVPGCPPSADAIYYVLKEVLEGRIPKLEG 174 Query: 166 VDYR 169 + Sbjct: 175 ELLK 178 >UniRef50_A9B2V8 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B2V8_HERA2 Length = 124 Score = 55.4 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 31/136 (22%), Positives = 49/136 (36%), Gaps = 21/136 (15%) Query: 34 AYVYRVDCGGCNACEIEI----FAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMR 89 VY ++ G IE+ A + + ++P HADI + TG + +R Sbjct: 2 IAVYHLNAGSTG---IEVRILAEAIRSAR------NLTWAATPAHADIFVLTGPIPLLLR 52 Query: 90 MPALRAY-ESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTI--VPIDVWIPGCPPTPA 146 + + D ++ G + G F GG + + + I G PPT A Sbjct: 53 PALSNVWRDFIADRAPLIALGRASIDGHPFG-----RGGLAELPEIQVAAKIDGDPPTVA 107 Query: 147 ATIHGFAVALGLLQQK 162 A G AL K Sbjct: 108 AIQAGIVQALNARTAK 123 >UniRef50_Q58591 F420-non-reducing hydrogenase vhu subunit G n=13 Tax=Methanococcales RepID=VHUG_METJA Length = 288 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 62/213 (29%), Gaps = 63/213 (29%) Query: 43 GCNACEI----------EIFAAITPVFDAERFGIKVVSSPRHA----DILLFTGAVTRAM 88 GC+ C I E+ + V+ +++ P+ D+ L G + Sbjct: 15 GCSGCHISLLDLHDKLLEVLPNLEIVY------APIIADPKEIPEGIDVFLVEGGIRNEH 68 Query: 89 RMPALRAYESAPDHKICVSYGACGVGGGI------------FHDLYSV------------ 124 +E KI +++G C GGI + +YS Sbjct: 69 DEHL--IHEIREKSKIVIAWGTCAAYGGIPGLGNLYKKEELLNYVYSTDSTENKGEIPSE 126 Query: 125 --------WGGSDTIVPIDVWIPGCPPTPAATIHGFAVALG----LLQQKIHAVDY---- 168 + +D IPGCPPTP L L KI + Sbjct: 127 EIPPLEEYVKPIKDFIKVDYTIPGCPPTPKMIADAIIALLNGEEPKLPTKIVCDECPRKK 186 Query: 169 RDPTGVTMQPLWPQIPPSQRIAIEREARRLAGY 201 + T + P +R E + G+ Sbjct: 187 ENVFPETFKRTHEGRPDPERCLFE-QGYTCLGF 218 >UniRef50_Q00393 Coenzyme F420 hydrogenase subunit gamma n=3 Tax=Methanococcus RepID=FRHG_METVO Length = 243 Score = 54.6 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 36/92 (39%), Gaps = 10/92 (10%) Query: 76 DILLFTGAVTRAMRMPALRAYESAPD-HKICVSYGACGVGGGIFH---------DLYSVW 125 DI L G+V + + K V+ GAC GG+ ++ + Sbjct: 66 DIALVEGSVCLDDHHSMDDILTTRKNSKKSLVALGACAASGGVTRFRRVGQMSQPSHASF 125 Query: 126 GGSDTIVPIDVWIPGCPPTPAATIHGFAVALG 157 ++ +D+ +PGCPP+ + + AL Sbjct: 126 VPIGDVIKVDLALPGCPPSTESIVKLLTAALE 157 >UniRef50_B9L8N0 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Nautilia profundicola AmH RepID=B9L8N0_NAUPA Length = 288 Score = 54.2 bits (129), Expect = 4e-06, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 42/115 (36%), Gaps = 20/115 (17%) Query: 73 RHADILLFTGAVTRAMRMPALRAYESAPDH-----KICVSYGACGVGGGIFHDL--YSVW 125 + D+L+ GA+ + + K ++ G C V GG+F + Y+ Sbjct: 51 KQCDLLIVEGAL-KNNYPRLGYSLNELISKLFFKAKKVLALGTCAVYGGMFGEGLMYNKE 109 Query: 126 GGS------DTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGV 174 D I+ +PGCPP P F + + +KI D P + Sbjct: 110 QKGHYYKCRDKII----NLPGCPPHPDWI--AFVLDMISENKKIALDDLNRPKDI 158 >UniRef50_Q58136 Uncharacterized protein MJ0726 n=3 Tax=Methanocaldococcus RepID=Y726_METJA Length = 216 Score = 53.1 bits (126), Expect = 9e-06, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 39/111 (35%), Gaps = 7/111 (6%) Query: 76 DILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGG-------S 128 DI+L GAV + E + K+ ++ G+C V GG L + G Sbjct: 26 DIVLVGGAVNLDDEEEVKKIMEIRKNSKVLIAVGSCAVSGGFQRMLIGLENGFPQRFVRI 85 Query: 129 DTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPL 179 +V +D I GCPP + ++ + + P V Sbjct: 86 GDVVKVDYAIIGCPPDEEEVERIVKAVIEKDKEIVDSYLILKPYEVIAGKP 136 >UniRef50_C6YT65 Predicted protein n=2 Tax=Francisella philomiragia RepID=C6YT65_9GAMM Length = 268 Score = 52.7 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 25/117 (21%), Positives = 36/117 (30%), Gaps = 32/117 (27%) Query: 76 DILLFTGAV-TRAMRMPALRAYESAPDHKICVSYGACGVGGG------------------ 116 DI G+V T + E A K ++ GAC V GG Sbjct: 63 DIAFIEGSVNTHHDIPRLQKIREKA---KYVIAIGACAVAGGIQALRNYTNAAELLEWQK 119 Query: 117 ---------IFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQ-QKI 163 I + S V +D I GCP T + L ++ +K+ Sbjct: 120 AVYPQDTDVIIKEDLSTAKAIKEYVNVDFEISGCPITTEQILKAIRQLLFGVEPEKV 176 >UniRef50_Q85WY3 ORF82a n=1 Tax=Pinus koraiensis RepID=Q85WY3_PINKO Length = 82 Score = 51.9 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 7/55 (12%) Query: 111 CGVGGGIFH-------DLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGL 158 C G +++ D YS D ++P+DV+ P CP P I Sbjct: 21 CSCPGSMYYHIEMFGTDSYSTVHEVDKLIPVDVYSPDCPTEPEVIIDAITKLRER 75 >UniRef50_C8X546 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X546_DESRD Length = 334 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 54/238 (22%), Positives = 75/238 (31%), Gaps = 68/238 (28%) Query: 41 CGGCNACEI----------EIFAAITPVF-----DAERFGIKVVSSPRHADILLFTGAV- 84 G C C++ E+ A V+ D +R ++ + + DI LF G V Sbjct: 12 AGACGGCDVSLLDTQGKLLELTAVADVVYWPVALDYKRSDLEALPE-KSVDIGLFNGVVR 70 Query: 85 TRAMRMPALRAYESAPDHKICVSYGACGVGGGI------------FHDLY---------- 122 T A R E ++ V+YGAC GGI F Y Sbjct: 71 TSEQAEDARRLRERC---RVLVAYGACACHGGIPGLANQSDREEIFRVAYQDTVSTDNPD 127 Query: 123 --------SVWGG-------------SDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQ 161 V GG +V +D ++PGCPPTP + LG++Q Sbjct: 128 QIRPQQRTPVPGGEVTLPAFHDSVRALHQVVDVDYFLPGCPPTPERILD----LLGVVQA 183 Query: 162 KIHAVDYRDPTGVTMQPLWPQIPPSQRIAIEREARRLAGYRQGREICDRLLRHLSDDP 219 D P G + P R R R YR + D L Sbjct: 184 YNAGDDL-PPAGSILAPEATLCQECPRAETRRAGRMPRLYRPHEIVADPETCFLEQGV 240 >UniRef50_A0LP54 NADH ubiquinone oxidoreductase, 20 kDa subunit n=7 Tax=Deltaproteobacteria RepID=A0LP54_SYNFM Length = 324 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 32/157 (20%), Positives = 46/157 (29%), Gaps = 56/157 (35%) Query: 42 GGCNACEIEIFAAITPV---------------FDAERFGIK----VVSSPRHADILLFTG 82 C CEI + FD + FG + P ADI + +G Sbjct: 11 SSCAGCEISMLNMGGLFLELLKEIRIVHMPLLFDHKYFGQAGEENFIGIP-EADIGIVSG 69 Query: 83 AV-TRAMRMPALRAYESAPDHKICVSYGACGVGGGI------------FHDLYSVWGGSD 129 + AL+ +I V+ G C GGI F Y ++ Sbjct: 70 GIRNEEQLEVALKVRAQC---RILVALGTCATHGGIPALMNRYSDEDLFRRYYRTSETTE 126 Query: 130 TIVP--------------------IDVWIPGCPPTPA 146 P +DV++ GCPP P Sbjct: 127 AAAPPNEVVPRFLDRTYALDEKARVDVYMAGCPPHPD 163 >UniRef50_Q21RP8 NADH ubiquinone oxidoreductase, 20 kDa subunit n=4 Tax=Proteobacteria RepID=Q21RP8_RHOFD Length = 188 Score = 51.1 bits (121), Expect = 3e-05, Method: Composition-based stats. Identities = 38/176 (21%), Positives = 58/176 (32%), Gaps = 44/176 (25%) Query: 22 MKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSP----RH--- 74 M + R V V GC C + +FD I+ SP + Sbjct: 1 MMAPAMSPTPRKLKVATVSLAGCFGCHMSFLDIDERLFDLIEH-IEFDRSPLTDIKQVGA 59 Query: 75 ADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGG------------IFHDLY 122 DI L G + A + LR + + K V+ GAC + GG + ++Y Sbjct: 60 CDIGLIEGGLCNAENVQVLREFRA--HCKTLVAVGACAITGGLPAQRNHLDLGQLLTEVY 117 Query: 123 SVWGGS--------DTIVP--------------IDVWIPGCPPTPAATIHGFAVAL 156 G D +P +D +PGCPP+ A H + + Sbjct: 118 RSRPGLSAGGAIPNDPELPLLLNKVHPIREVVHVDYSLPGCPPSADAFWHFLSDLM 173 >UniRef50_C1DUF2 Quinone-reactive Ni/Fe-hydrogenase small chain (Membrane-bound hydrogenase small subunit) (Hydrogen:quinoneoxidoreductase) n=3 Tax=Bacteria RepID=C1DUF2_SULAA Length = 416 Score = 50.7 bits (120), Expect = 4e-05, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 33/88 (37%), Gaps = 16/88 (18%) Query: 77 ILLFTGAVTRAMRMP----------ALRAYESAPDHKICVSYGACGVGGGI---FHDLYS 123 +L G++ M R A D K ++ GAC GG+ + + Sbjct: 166 LLFVEGSIPVKMEYAFTTGRHPETGVQRVRRLAKDAKAVIAVGACASFGGVPAAYPNPTG 225 Query: 124 VWGGSDTI--VPIDVWIPGCPPTPAATI 149 G D + VP+ V IP CP P + Sbjct: 226 AVGVMDVVSGVPV-VNIPACPANPVNIV 252 >UniRef50_Q3M430 NADH ubiquinone oxidoreductase, 20 kDa subunit n=46 Tax=Bacteria RepID=Q3M430_ANAVT Length = 181 Score = 50.4 bits (119), Expect = 5e-05, Method: Composition-based stats. Identities = 32/157 (20%), Positives = 49/157 (31%), Gaps = 45/157 (28%) Query: 42 GGCNACEIEIFAAITPVFDAERFGIKVVSSP--------RHADILLFTGAVTRAMRMPAL 93 GGC+ C + + D VV SP D++L GA+ + + Sbjct: 12 GGCSGCHMSFLDLDEWLIDLAAQ-ADVVFSPFADIKEYPEGVDVVLVEGAIANEEHLTTI 70 Query: 94 RAYESAPDHKICVSYGACGVGG----------------------------------GIFH 119 + I +S+G C V G GI Sbjct: 71 KIVRERSQ--ILISFGDCAVTGNVTALRNPLGSAEPVLQRCYIQAVDINPQIPQEPGIVP 128 Query: 120 DLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVAL 156 L +IVP+D+++PGCPP+ L Sbjct: 129 PLLDRVTPVHSIVPVDIYLPGCPPSATRIRAALEPLL 165 >UniRef50_Q8TYW2 Coenzyme F420-reducing hydrogenase, gamma subunit n=2 Tax=Methanopyrus kandleri RepID=Q8TYW2_METKA Length = 305 Score = 50.4 bits (119), Expect = 6e-05, Method: Composition-based stats. Identities = 24/170 (14%), Positives = 47/170 (27%), Gaps = 43/170 (25%) Query: 72 PRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGI-------------- 117 P H ++ + G++ + A D I V+ G C GG+ Sbjct: 51 PEHVNVAVIEGSIRNEEDLEVAEELREAAD--IVVAVGTCACYGGVHGLANLYQLDDILE 108 Query: 118 --FHDLYSV-----------------WGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGL 158 F + + ++ +D +PGCPP P + L Sbjct: 109 WVFKETPTTDDEGETPEEVVPELFGYVRPLPEVIDVDYMLPGCPPKPESIAEVITAILED 168 Query: 159 LQQKIHAV--------DYRDPTGVTMQPLWPQIPPSQRIAIEREARRLAG 200 + ++ + D ++ Q P + + G Sbjct: 169 REPELPTTNLCEECPREKEDIPIEEIKFRTGQGRPDPDKCLLEQGYPCMG 218 >UniRef50_B1L5Y5 Coenzyme F420-reducing hydrogenase, gamma subunit n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L5Y5_KORCO Length = 319 Score = 50.0 bits (118), Expect = 8e-05, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 46/158 (29%), Gaps = 60/158 (37%) Query: 76 DILLFTGAVT----RAMRMPALRAYESAPDHKICVSYGACGVGGGI-------------- 117 D+ + G + M R K+ ++YG+C GGI Sbjct: 60 DVAIINGGIRTSEHEEMVKLLRRKS------KLVIAYGSCAHMGGIPALANAYTRESILK 113 Query: 118 --FHDLYSVWGG---------------------------SDTIVPIDVWIPGCPPTPA-- 146 + + +V D ++ +D +IPGCPPTP Sbjct: 114 YVYEEAPTVTNPEGKRPKTRVSVDGMDFELPEFLEYLDPLDAVIDVDYYIPGCPPTPEIT 173 Query: 147 -----ATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPL 179 + + G G + A+ Y P T Sbjct: 174 WEAVSSILSGNLPPKGHVFGSDRALCYECPLNETKPEK 211 >UniRef50_Q8TXX1 Coenzyme F420-reducing hydrogenase, gamma subunit n=1 Tax=Methanopyrus kandleri RepID=Q8TXX1_METKA Length = 238 Score = 49.6 bits (117), Expect = 9e-05, Method: Composition-based stats. Identities = 31/141 (21%), Positives = 44/141 (31%), Gaps = 14/141 (9%) Query: 75 ADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFH--------DLYS-VW 125 ADIL GAV A + E+A VS G+C GG D Y Sbjct: 43 ADILFVEGAVDFADAETLEKLEEAASAVSTVVSLGSCAATGGFERHVIGMRDPDRYHFTV 102 Query: 126 GGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIH-----AVDYRDPTGVTMQPLW 180 + V D I GCPPT + ++ + D+ T P+ Sbjct: 103 FPAAKFVETDYAINGCPPTTDVIASFLRALEEENEDELRPYEVLSGDFHGLTPELSAPVT 162 Query: 181 PQIPPSQRIAIEREARRLAGY 201 P + + + G Sbjct: 163 GPTVPVEDVLLTSNKDLCLGC 183 >UniRef50_C6A155 NiFe hydrogenase I, subunit delta n=1 Tax=Thermococcus sibiricus MM 739 RepID=C6A155_THESM Length = 267 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 37/105 (35%), Gaps = 23/105 (21%) Query: 73 RHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGI------------FHD 120 + DI G+V+ + ++ KI ++ G+C V GG+ + Sbjct: 57 KEVDIAFIEGSVSTQEEVELVKKIREKA--KIVIAVGSCAVHGGVQSWDKDKEFNELWKT 114 Query: 121 LYS---------VWGGSDTIVPIDVWIPGCPPTPAATIHGFAVAL 156 +Y + + + +D + GCPP ++ L Sbjct: 115 VYGDAHVKFEPKMAEPVEKYIKVDYKLYGCPPEKKDFLYALGTLL 159 >UniRef50_A1SU83 Hydrogen dehydrogenase n=23 Tax=Proteobacteria RepID=A1SU83_PSYIN Length = 433 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 51/165 (30%), Gaps = 56/165 (33%) Query: 31 RRSAYVYRVDCGGCNACEIEIFAAITPVFD------AERFGIKVVSSPR--------HAD 76 ++ + GC C + D ER +++ SP D Sbjct: 255 KKKLKLATCSLAGCFGCHMSFLDM-----DERLIELLER--VELSRSPLNDIKTCAPDCD 307 Query: 77 ILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGI----------------FHD 120 + L GAV + LR + KI ++ G+C + GG+ + + Sbjct: 308 LGLIEGAVCNTENIAVLRHFRE--SCKIIIAVGSCAINGGVPSLRNNIDVKDCLDEAYLN 365 Query: 121 LYSVWG-----------------GSDTIVPIDVWIPGCPPTPAAT 148 + ++ +D ++PGCPP A Sbjct: 366 GIGLVNPKVPIDKELPYLLEKVYPIHEVIKVDYFLPGCPPPADAF 410 >UniRef50_A7IHL6 Ni Fe-hydrogenase III large subunit-like protein n=4 Tax=Proteobacteria RepID=A7IHL6_XANP2 Length = 110 Score = 48.4 bits (114), Expect = 2e-04, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 22/56 (39%) Query: 54 AITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYG 109 A+ D R G+ PR A++LL + M A AY P + + G Sbjct: 41 ALAAGLDLSRAGLTEADGPRQANVLLVMLPLPAPMLKAATVAYAQMPRPRTVLVLG 96 >UniRef50_D2BHA4 Nickel-dependent hydrogenase, group 3, small subunit n=5 Tax=Dehalococcoides RepID=D2BHA4_DEHSV Length = 312 Score = 48.4 bits (114), Expect = 2e-04, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 39/116 (33%), Gaps = 35/116 (30%) Query: 74 HADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGI------------FHDL 121 AD+ + TG + A E K+ V+ G C GGI + Sbjct: 60 EADLGIITGGIRNEENREL--ALEMRKKCKLIVALGTCACFGGIPALANLSTTEDMLKQV 117 Query: 122 YSVWGG---------------------SDTIVPIDVWIPGCPPTPAATIHGFAVAL 156 +S G D I+ +D+ +PGCPPTPA + L Sbjct: 118 FSKEKGTDPASPPGDKSLPKMLDRVYAVDEIITVDIHLPGCPPTPAHIVELLTAVL 173 >UniRef50_C0QEJ1 HynB n=4 Tax=Deltaproteobacteria RepID=C0QEJ1_DESAH Length = 330 Score = 47.3 bits (111), Expect = 5e-04, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 33/100 (33%), Gaps = 5/100 (5%) Query: 97 ESAPDHKICVSYGACGVGGGI--FHDLYSVWGGSDTIVPID-VWIPGCPPTPAATIHGFA 153 + P + ++ G C GGI + G + + + I GCPP P + Sbjct: 165 DVIPKAAVTIALGTCAAYGGIPSAAPNPGGYKGVKDAIGVATINISGCPPNPLNLLSTIV 224 Query: 154 VALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIER 193 L + I + P + + + P + + Sbjct: 225 KYLNK--ETIELDELGRPLFAYAETVHDRCPRLKHFENDE 262 >UniRef50_B6YU80 Cytosolic NiFe-hydrogenase, delta subunit n=9 Tax=Thermococcaceae RepID=B6YU80_THEON Length = 265 Score = 47.3 bits (111), Expect = 5e-04, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 36/103 (34%), Gaps = 25/103 (24%) Query: 76 DILLFTGAV-TRAMRMPALRAYESAPDHKICVSYGACGVGGGI------------FHDLY 122 DI G+V T + E+A KI V+ GAC GG+ + +Y Sbjct: 54 DIAFIEGSVSTEEEVELVKKIRENA---KIVVAVGACATQGGVQSWEKDKSLEELWKAVY 110 Query: 123 S---------VWGGSDTIVPIDVWIPGCPPTPAATIHGFAVAL 156 + + + +D I GCPP I+ L Sbjct: 111 GDGKVKFEPKMAEPLENYIKVDYRIYGCPPEKKDFIYAIGTFL 153 >UniRef50_B4SFA2 NADH ubiquinone oxidoreductase 20 kDa subunit n=10 Tax=Chlorobiaceae RepID=B4SFA2_PELPB Length = 258 Score = 46.5 bits (109), Expect = 7e-04, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 23/87 (26%) Query: 76 DILLFTGAVTRAMR-MPALRAYESAPDHKICVSYGACGVGGGI--FHDLYSVWGGSDTIV 132 DI L G+++R L+ + A KI V++G C GGI + + D + Sbjct: 63 DIALIEGSISRQDEVERLLKIRQQA---KILVAFGTCACFGGINSLKNRFPAREMIDAVY 119 Query: 133 P-----------------IDVWIPGCP 142 P +D+ IPGCP Sbjct: 120 PGMPIETLPVRKISDVVKVDLSIPGCP 146 >UniRef50_UPI0001C420D3 coenzyme F420 hydrogenase gamma subunit FrhG n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C420D3 Length = 319 Score = 46.5 bits (109), Expect = 9e-04, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 30/93 (32%), Gaps = 13/93 (13%) Query: 76 DILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWG--------- 126 D+ L G+V E + ++G+C + G Y+ G Sbjct: 141 DLALVEGSVCLQDEHSVKELMEVREKAGLVCAFGSCAMTGCFTR--YARGGQLAQPKHES 198 Query: 127 --GSDTIVPIDVWIPGCPPTPAATIHGFAVALG 157 +V +D IPGCP +P + Sbjct: 199 FVPISDLVKVDCAIPGCPASPEIIAKVVVALIN 231 >UniRef50_Q2LYD8 Nickel-dependent hydrogenase, small chain n=2 Tax=Bacteria RepID=Q2LYD8_SYNAS Length = 253 Score = 45.7 bits (107), Expect = 0.001, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 51/158 (32%), Gaps = 40/158 (25%) Query: 22 MKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHA------ 75 M+R L++ V D C C++++ + D G V R Sbjct: 1 MERMLMK-----PKVAFFDFACCEGCQLQVANLGEALLDI--LGAIDVVEFREVMSEKWD 53 Query: 76 ---DILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGI--------------- 117 D+ + G++T +R + ++YG+C GG+ Sbjct: 54 KNYDVAIVEGSITDEHAEQRIRKIRDRSA--VLIAYGSCATIGGVNGMKNSFVLDEIRQS 111 Query: 118 -FHDLYSV-----WGGSDTIVPIDVWIPGCPP-TPAAT 148 + Y + +V +D +I GCP P Sbjct: 112 VYGKDYQLFDSKKTRPIHQVVKVDYFINGCPVYHPEVI 149 >UniRef50_A5UM99 Coenzyme F420-reducing hydrogenase, gamma subunit, FrhG n=3 Tax=Methanobacteriaceae RepID=A5UM99_METS3 Length = 276 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 31/93 (33%), Gaps = 13/93 (13%) Query: 76 DILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWG--------- 126 D+ L G+V E+ + ++G+C + G Y+ G Sbjct: 98 DLCLIEGSVCLQDEHSVHELLEAREKSALICAFGSCALNG--CFTTYARGGQQAQPKHES 155 Query: 127 --GSDTIVPIDVWIPGCPPTPAATIHGFAVALG 157 ++V +DV +PGCP P Sbjct: 156 FLPISSLVKVDVALPGCPVAPEMIAKTVVALCN 188 >UniRef50_C1DUT4 Putative [NiFe] hydrogenase, delta subunit n=1 Tax=Sulfurihydrogenibium azorense Az-Fu1 RepID=C1DUT4_SULAA Length = 249 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 44/128 (34%), Gaps = 29/128 (22%) Query: 42 GGCNACEIEIFAAITPVFDAERFGIKV------VSSPRHADILLFTGAVTRAMRMPALRA 95 C+ C++ + + E F I V++ + D G+V+ R Sbjct: 9 SSCDGCQLSFINLSGELAELENFSIDYFLEGQSVNNYEYFDFSFVEGSVS--TTEEIERI 66 Query: 96 YESAPDHKICVSYGACGVGGGI-----FHDL------YSVWG----------GSDTIVPI 134 + K+ V GAC V GG+ F ++ Y+ +V + Sbjct: 67 KDIRERSKVLVGIGACAVSGGVQSIRNFRNIDDIKTVYNTVDITKNVLENALPISQVVKV 126 Query: 135 DVWIPGCP 142 D I GCP Sbjct: 127 DFEIRGCP 134 >UniRef50_Q1AZS0 Ni Fe-hydrogenase III large subunit-like protein n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AZS0_RUBXD Length = 540 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 24/51 (47%) Query: 60 DAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGA 110 D E G+ + PRHA +LL G + A+R A Y + ++ GA Sbjct: 42 DVEAAGLGMTGVPRHASVLLVVGELPAALRRAAAVVYAQMMRPRAVLAAGA 92 >UniRef50_D1U6F3 Hydrogenase (NiFe) small subunit HydA n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U6F3_9DELT Length = 328 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 24/57 (42%), Gaps = 4/57 (7%) Query: 106 VSYGACGVGGGIFH--DLYSVWGGSDTIVPID--VWIPGCPPTPAATIHGFAVALGL 158 ++YG C GG+ + G D + P + +PGCPP P + + + Sbjct: 164 ITYGTCASYGGVQKAAPNPTACKGVDELFPGKPIINVPGCPPNPYSLVGTIVYYVTK 220 >UniRef50_B8FWY3 Hydrogenase (NiFe) small subunit HydA n=2 Tax=Desulfitobacterium hafniense RepID=B8FWY3_DESHD Length = 375 Score = 45.0 bits (105), Expect = 0.002, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 19/57 (33%), Gaps = 4/57 (7%) Query: 103 KICVSYGACGVGGGIFHDLYSVWG--GSDTIVPID--VWIPGCPPTPAATIHGFAVA 155 K V+ G C GG + G I+P + + GCP P + Sbjct: 145 KYVVAVGHCATYGGPVAGYPNPTQSTGVQNILPERRVINVSGCPAHPDWIMGTLLHL 201 >UniRef50_P13061 Periplasmic [NiFe] hydrogenase small subunit n=63 Tax=Proteobacteria RepID=PHNS_DESDA Length = 315 Score = 44.6 bits (104), Expect = 0.003, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 29/86 (33%), Gaps = 20/86 (23%) Query: 99 APDHKICVSYGACGVGGGI------------FHDLYSVWGGSDTIVPIDVWIPGCPPTPA 146 P K VS G C GGI +D Y+ G + +PGCPP P Sbjct: 151 LPKAKAVVSIGTCACYGGIQAAKPNPTAAKGINDCYADLGVKA------INVPGCPPNPL 204 Query: 147 ATIHGFAVALGLLQQKIHAVDYRDPT 172 + L QKI + P Sbjct: 205 NMVGTLVAFLK--GQKIELDEVGRPV 228 >UniRef50_Q3ABV6 [Ni/Fe] hydrogenase, small subunit n=3 Tax=Clostridia RepID=Q3ABV6_CARHZ Length = 354 Score = 44.6 bits (104), Expect = 0.003, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 29/89 (32%), Gaps = 5/89 (5%) Query: 103 KICVSYGACGVGGGIFHDLYSVWGGSDTIVPID----VWIPGCPPTPAATIHGFAVALGL 158 K ++ G C GGI + G ID + IPGCPP P G + L Sbjct: 146 KAVIAIGTCAAFGGIPAADPNPTGCVPVTEVIDPKKVLNIPGCPPHPD-WFVGSLAHVLL 204 Query: 159 LQQKIHAVDYRDPTGVTMQPLWPQIPPSQ 187 + + P + P Q Sbjct: 205 YNELPKTDKFGRPKMFYEGIIHDNCPRRQ 233 >UniRef50_B6YSK0 Sulfhydrogenase II, delta chain n=6 Tax=Thermococcaceae RepID=B6YSK0_THEON Length = 246 Score = 44.6 bits (104), Expect = 0.003, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 42/126 (33%), Gaps = 29/126 (23%) Query: 44 CNACEIEIFAAITPVFDAERF----GIKVVSSPR---HADILLFTGAVTRAMRMPALRAY 96 C C + I +FD F + +S H D+ L TG V+ + L+ Sbjct: 15 CGGCALNILFLYEKLFDLLEFYEITEFHMATSLSEGSHYDVALVTGTVSSQRDLALLK-- 72 Query: 97 ESAPDHKICVSYGACGVGGG---------------IFHDLYSVWGGSD-----TIVPIDV 136 E+ ++ G C G ++ D + D V +D Sbjct: 73 EARNHSDYLIALGTCATHGSVQASVEGSIREKLKRVYGDEGNPMRALDSKPVVEYVAVDF 132 Query: 137 WIPGCP 142 +PGCP Sbjct: 133 ALPGCP 138 >UniRef50_O28898 Methylviologen-reducing hydrogenase, subunit gamma (VhuG) n=1 Tax=Archaeoglobus fulgidus RepID=O28898_ARCFU Length = 293 Score = 44.2 bits (103), Expect = 0.004, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 27/81 (33%), Gaps = 28/81 (34%) Query: 105 CVSYGACGVGGGI----------------FHDLYSVWG------------GSDTIVPIDV 136 V++G C GGI F S G D++V +D Sbjct: 79 LVAFGICASCGGIMGLANLHSKEEILEDVFGSAKSSVGDLRIPEMLEFVKPLDSVVEVDC 138 Query: 137 WIPGCPPTPAATIHGFAVALG 157 +I GCPPTP + F Sbjct: 139 YIGGCPPTPEQIYNAFKAIFE 159 >UniRef50_A7BI79 Ni,Fe-hydrogenase small subunit n=2 Tax=Aquificaceae RepID=A7BI79_HYDTH Length = 345 Score = 43.8 bits (102), Expect = 0.005, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 21/84 (25%) Query: 77 ILLFTGAVTRAMRMP---------ALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGG 127 IL+ G+V+ + E+A + + ++ G+C GGI H + G Sbjct: 114 ILIVEGSVSPRNKGVYCTVSGKSNVELLKEAAQNAGLVIAVGSCASWGGIPHAEPNPTGA 173 Query: 128 SDTIVPID--------VWIPGCPP 143 P+ V IPGCPP Sbjct: 174 V----PVSQILGDRQVVNIPGCPP 193 >UniRef50_D0NDQ9 Putative uncharacterized protein n=1 Tax=Phytophthora infestans T30-4 RepID=D0NDQ9_PHYIN Length = 62 Score = 43.4 bits (101), Expect = 0.006, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 3/45 (6%) Query: 88 MRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIV 132 M + ++ PD V G+C GGG +H Y+ G + V Sbjct: 1 MALGMRSVHDLMPD---VVFMGSCADGGGYYHYSYAEVYGYNRFV 42 >UniRef50_C8QXK1 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QXK1_9DELT Length = 178 Score = 43.4 bits (101), Expect = 0.006, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 36/114 (31%), Gaps = 34/114 (29%) Query: 76 DILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGI------------------ 117 D+ L GAV+ R + ++ V+ G C G + Sbjct: 54 DLALLEGAVSTPEDEAKARLVRAHS--RLVVALGDCACQGNVPALRNRLDNEQLLDLVYR 111 Query: 118 -FHDLYSVWGG-------------SDTIVPIDVWIPGCPPTPAATIHGFAVALG 157 D + ++ +D+++PGCPP PAA + L Sbjct: 112 QQADGPAAAPPDRNVPPLLTHSLPLHRVIAVDLFLPGCPPPPAAIVRALTAVLD 165 >UniRef50_Q59113 Hydrogenase small beta subunit n=2 Tax=Bacteria RepID=Q59113_9BACT Length = 179 Score = 43.4 bits (101), Expect = 0.007, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 28/88 (31%), Gaps = 34/88 (38%) Query: 103 KICVSYGACGVGGGI----------------FHDLYSVWG------------------GS 128 K V++G C V GGI + + S Sbjct: 77 KYLVAWGDCAVFGGINCMRNFIPKDVVLREGYIETASTVNPQGIVPSEDIPELLPRALPI 136 Query: 129 DTIVPIDVWIPGCPPTPAATIHGFAVAL 156 D V +DV++PGCPP + F L Sbjct: 137 DYEVKVDVYVPGCPPDADTIYYVFKELL 164 >UniRef50_A6DCC1 NI/FE-HYDROGENASE SMALL SUBUNIT n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DCC1_9PROT Length = 369 Score = 43.0 bits (100), Expect = 0.009, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 7/53 (13%) Query: 103 KICVSYGACGVGGGIFHDLYSVWG-----GSDTI-VPIDVWIPGCPPTPAATI 149 K ++ G C GG+ + G G D I VPI + +P CP P I Sbjct: 168 KAIIAVGNCASFGGVVAANPNPTGATGVMGVDGINVPI-INLPACPVNPETMI 219 >UniRef50_Q2J4E9 NADH ubiquinone oxidoreductase, 20 kDa subunit n=29 Tax=Bacteria RepID=Q2J4E9_FRASC Length = 278 Score = 42.3 bits (98), Expect = 0.014, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 35/109 (32%), Gaps = 23/109 (21%) Query: 76 DILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGI------------------ 117 D+ L G+VT R ++ + V+ GAC GGI Sbjct: 67 DLSLVEGSVT--TEQDVERIHQVRAASRRLVTIGACATAGGIQALRNFADVGDFLAAVYA 124 Query: 118 ---FHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKI 163 + + T V +D + GCP P + + L + I Sbjct: 125 TPAYVSTLATSTPISTHVRVDFELQGCPINPRQLLEVISAFLARRRPNI 173 >UniRef50_A9E0C1 Putative uncharacterized protein n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9E0C1_9RHOB Length = 340 Score = 42.3 bits (98), Expect = 0.016, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 21/39 (53%) Query: 65 GIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHK 103 G++VV +PR A +LL G + A+ R ++ P + Sbjct: 36 GLRVVETPRAAAVLLVVGTIPEALIPQLHRLHDQLPHPR 74 >UniRef50_A8UU12 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UU12_9AQUI Length = 252 Score = 42.3 bits (98), Expect = 0.016, Method: Composition-based stats. Identities = 25/101 (24%), Positives = 35/101 (34%), Gaps = 23/101 (22%) Query: 76 DILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGI-----------FHDLYS- 123 DI G+V+ ++ E ++ V+ GAC GGI F +Y Sbjct: 50 DIAFVEGSVSTQEEAEFIK--EVREKARLLVTIGACATSGGIQALRNFGSLEEFSSVYPK 107 Query: 124 -----VWG---GSDTIVPIDVWIPGCPPTPAATIHGFAVAL 156 V V +D I GCP P + F AL Sbjct: 108 PEFIKVLKRSTPISEHVKVDYEIYGCPINPH-ILENFVKAL 147 >UniRef50_Q0W2X8 Coenzyme F420-reducing hydrogenase, gamma subunit n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W2X8_UNCMA Length = 232 Score = 41.9 bits (97), Expect = 0.020, Method: Composition-based stats. Identities = 24/128 (18%), Positives = 39/128 (30%), Gaps = 24/128 (18%) Query: 39 VDCGGCNACEIEIFA--------AITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRM 90 V C+ CEI D P+ D+L GA + Sbjct: 9 VHLAACSGCEISFLDNFERVLDMMDMVDIDYMTLIADATEIPK-VDLLFVDGAACLQSKE 67 Query: 91 PALRAYESAPDHKICVSYGACGVG--------GG----IFHDLYSVWGGSDTIVPIDVWI 138 ++ + V++G C GG H+ + +V +D ++ Sbjct: 68 SVESLKKARENTGFLVAWGGCSSTATINNFSRGGQSPQPQHESFP---QISRLVKVDAFV 124 Query: 139 PGCPPTPA 146 PG PP P Sbjct: 125 PGSPPGPE 132 >UniRef50_B2TM84 [Ni/Fe] hydrogenase, small subunit n=2 Tax=Clostridium botulinum RepID=B2TM84_CLOBB Length = 313 Score = 41.9 bits (97), Expect = 0.022, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 31/87 (35%), Gaps = 18/87 (20%) Query: 77 ILLFTGAVTRAM--RMPALRAYE------------SAPDHKICVSYGACGVGGGIFHDLY 122 ILL GA+ L Y+ +A K +S G C GG Sbjct: 115 ILLVCGAIPINADGLYTVLATYQGRKITAMELVKQAAQKAKYIISIGTCACYGGPTAAKP 174 Query: 123 SVWGGS---DTIVPID-VWIPGCPPTP 145 +V + ++ D + IPGCP P Sbjct: 175 NVSQALSVKEYLMRNDIINIPGCPANP 201 >UniRef50_Q0FXV5 Putative uncharacterized protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0FXV5_9RHIZ Length = 391 Score = 41.5 bits (96), Expect = 0.025, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 2/46 (4%) Query: 59 FDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKI 104 F+ RF +SPRHA I L G + R R ++ P ++ Sbjct: 19 FNDARF--VRAASPRHAAIFLIAGRMRLEDREDLRRLHDQMPHPRV 62 >UniRef50_C7NPL1 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Halorhabdus utahensis DSM 12940 RepID=C7NPL1_HALUD Length = 266 Score = 41.5 bits (96), Expect = 0.027, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 23/76 (30%), Gaps = 22/76 (28%) Query: 104 ICVSYGACGVGGGIFH----------------------DLYSVWGGSDTIVPIDVWIPGC 141 + V+ G+C GGI Y + + ++ ++ IPGC Sbjct: 81 VVVALGSCAAFGGINALRNHQDFETVKERVYGEDADSITSYPIARPIEDVIEVEYEIPGC 140 Query: 142 PPTPAATIHGFAVALG 157 P + + Sbjct: 141 PIDREEFLGAVTALVN 156 >UniRef50_B1ZXG1 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZXG1_OPITP Length = 334 Score = 41.1 bits (95), Expect = 0.033, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 29/115 (25%), Gaps = 49/115 (42%) Query: 86 RAMRMPALRAYESAPDHKICVSYGACGVGGGI---------------------------- 117 M R + ++YGAC GGI Sbjct: 74 EEMAQLLRRKSQ------FLIAYGACAHLGGIPGLANQFDREQLLSYVYEQTPTIDNPTH 127 Query: 118 ---------------FHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALG 157 + D +V +D +IPGCPPTP T L Sbjct: 128 VRPQPAHQNNGHSLTLPEFRHTVRSLDQVVAVDYYIPGCPPTPKITKAAITALLE 182 >UniRef50_P61429 Periplasmic [NiFe] hydrogenase small subunit 2 n=9 Tax=Desulfovibrio RepID=PHNS2_DESVH Length = 324 Score = 41.1 bits (95), Expect = 0.037, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 22/62 (35%), Gaps = 6/62 (9%) Query: 103 KICVSYGACGVGGGIFHDLYSVWGGS---DTIVPID---VWIPGCPPTPAATIHGFAVAL 156 K ++ G C GGI + G + + P + I GCPP P I L Sbjct: 156 KAVIAMGTCASFGGIQAAAPNPSGAIGVREALAPFGIQPINIAGCPPNPVNYIGTVVHLL 215 Query: 157 GL 158 Sbjct: 216 TK 217 >UniRef50_Q39QE2 F420-non-reducing hydrogenase subunit G n=5 Tax=Geobacter RepID=Q39QE2_GEOMG Length = 316 Score = 40.7 bits (94), Expect = 0.040, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 27/86 (31%), Gaps = 32/86 (37%) Query: 104 ICVSYGACGVGGGIFHDL--------------------------------YSVWGGSDTI 131 + +++G+C V GGI D++ Sbjct: 79 LIIAWGSCAVYGGIAGAGNVHSRQEIIDAVYIGNKTTATHAPPTKEVSALEPSVSPLDSV 138 Query: 132 VPIDVWIPGCPPTPAATIHGFAVALG 157 + +D+++PGC P PA L Sbjct: 139 IDVDLYLPGCAPHPAFVFDALLALLE 164 >UniRef50_D1Z1F3 Coenzyme F420 hydrogenase subunit gamma n=1 Tax=Methanocella paludicola SANAE RepID=D1Z1F3_METPS Length = 235 Score = 40.3 bits (93), Expect = 0.054, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 16/123 (13%) Query: 39 VDCGGCNACEIEIFAAITPVFDA-ERFGIKVVSSPRHA------DILLFTGAVTRAMRMP 91 V C+ CEI + D + I+ ++ + A DI+ GA Sbjct: 9 VHLAACSGCEISFLDNFERLLDMMDMVDIEYMTLIKDATDIPKVDIVFVDGAACLQSEDA 68 Query: 92 ALRAYESAPDHKICVSYGACGVG--------GGIFHDLYS-VWGGSDTIVPIDVWIPGCP 142 ++ + V++G C GG + +V +D +PG P Sbjct: 69 VETLKKARENATYLVAWGGCSSTATINNFSRGGQLPQPQHESFPPIKRLVKVDASVPGSP 128 Query: 143 PTP 145 P P Sbjct: 129 PGP 131 >UniRef50_A5GFC8 Hydrogenase (NiFe) small subunit HydA n=6 Tax=Proteobacteria RepID=A5GFC8_GEOUR Length = 378 Score = 40.0 bits (92), Expect = 0.082, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 6/53 (11%) Query: 109 GACGVGGGIFHDLYSVWG--GSDTIV---PIDVWIPGCPPTPAATIHGFAVAL 156 G C GGI + G G IV PI + IPGCPP+P + L Sbjct: 159 GTCASYGGIQSVGPNPTGAVGVRDIVKDKPI-INIPGCPPSPYNLLSTVMYYL 210 >UniRef50_Q2KJQ3 HoxY n=4 Tax=Proteobacteria RepID=Q2KJQ3_CHRVI Length = 180 Score = 40.0 bits (92), Expect = 0.086, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 49/158 (31%), Gaps = 52/158 (32%) Query: 43 GCNACEIEIFAAITPVFDAERF-----GIKVVSSP--------RHADILLFTGAVTRAMR 89 GC+ C + ER +++V SP D+ + G+++ Sbjct: 16 GCSGCHMSFLDLD------ERLIELVEHVEIVYSPLVDTKELPARVDVGILEGSISSEDD 69 Query: 90 MPALRAYESAPDHKICVSYGACGVGGGI------------FHDLY--------------- 122 + R + VS G C V G + F Y Sbjct: 70 LEKARLFRERCT--RLVSLGDCAVTGNVPAMRNHFKLADVFDRAYRENVTLQPQIPTRRV 127 Query: 123 ----SVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVAL 156 + V +DV++PGCPP+ A H + + Sbjct: 128 PALLTPVKPVHGEVKVDVFVPGCPPSADAIWHVLSELI 165 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P16433 Formate hydrogenlyase subunit 7 n=169 Tax=Bacter... 286 4e-76 UniRef50_C7MLM8 Ni,Fe-hydrogenase III small subunit n=20 Tax=Bac... 273 6e-72 UniRef50_C6ANV6 Hydrogenase-4 component I n=6 Tax=Gammaproteobac... 262 6e-69 UniRef50_A7GWN3 HsdS n=9 Tax=Proteobacteria RepID=A7GWN3_CAMC5 258 2e-67 UniRef50_B6YT72 Hydrogenase 4, component I or formate hydrogen l... 239 4e-62 UniRef50_B6YTX0 Hydrogenase 4, component I or formate hydrogen l... 223 4e-57 UniRef50_O21272 NADH-ubiquinone oxidoreductase 20 kDa subunit n=... 219 7e-56 UniRef50_Q9DC70 NADH dehydrogenase [ubiquinone] iron-sulfur prot... 219 8e-56 UniRef50_Q0W2C0 Hydrogenase, small subunit-like protein (HycG-li... 218 1e-55 UniRef50_O75251 NADH dehydrogenase [ubiquinone] iron-sulfur prot... 216 5e-55 UniRef50_B5YKI3 NADH-quinone oxidoreductase subunit B 1 n=1 Tax=... 216 5e-55 UniRef50_B0TH78 NADH-quinone oxidoreductase subunit B n=5 Tax=Ba... 216 8e-55 UniRef50_B6YU96 Membrane bound hydrogenase, NiFe-hydrogenase sma... 215 1e-54 UniRef50_C5A2Q7 Formate hydrogenlyase II subunit H (Mhy2H) n=3 T... 214 2e-54 UniRef50_A6LXQ4 NADH-quinone oxidoreductase subunit B n=4 Tax=Ba... 213 5e-54 UniRef50_A8MBS9 NADH-quinone oxidoreductase, B subunit n=5 Tax=T... 212 1e-53 UniRef50_Q1AVI4 NADH-quinone oxidoreductase subunit B n=15 Tax=B... 212 1e-53 UniRef50_Q0BSK3 NADH-quinone oxidoreductase subunit B n=31 Tax=c... 211 2e-53 UniRef50_A3DKH2 NADH-quinone oxidoreductase, B subunit n=5 Tax=c... 211 2e-53 UniRef50_A1ASR2 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 211 2e-53 UniRef50_C7NUN9 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 209 5e-53 UniRef50_C7IG01 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 209 5e-53 UniRef50_D2R6Y4 NADH-quinone oxidoreductase, B subunit n=1 Tax=P... 208 1e-52 UniRef50_A6L170 NADH-quinone oxidoreductase subunit B n=35 Tax=B... 208 1e-52 UniRef50_B4U8H3 NADH-quinone oxidoreductase subunit B n=4 Tax=Ba... 208 1e-52 UniRef50_A5UXK1 NADH-quinone oxidoreductase subunit B 1 n=13 Tax... 206 4e-52 UniRef50_B9L8U0 Hydrogenase-4 component I n=2 Tax=Epsilonproteob... 206 4e-52 UniRef50_B2IID4 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 206 7e-52 UniRef50_B3QY47 NADH-quinone oxidoreductase subunit B 2 n=8 Tax=... 205 1e-51 UniRef50_B6IT61 Hydrogenase-4 component I n=4 Tax=Bacteria RepID... 205 1e-51 UniRef50_B1ZSE5 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 205 1e-51 UniRef50_B1W4V9 NADH-quinone oxidoreductase subunit B 2 n=27 Tax... 205 1e-51 UniRef50_Q3A825 NADH-quinone oxidoreductase subunit B/C/D n=103 ... 204 2e-51 UniRef50_B8J1E3 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 204 2e-51 UniRef50_C5GDP9 NADH-ubiquinone oxidoreductase 20 kDa subunit n=... 204 3e-51 UniRef50_D2R5G9 NADH-quinone oxidoreductase, B subunit n=2 Tax=P... 204 3e-51 UniRef50_Q3ZXS0 NADH-quinone oxidoreductase subunit B n=5 Tax=De... 203 3e-51 UniRef50_Q8DKZ4 NAD(P)H-quinone oxidoreductase subunit K n=21 Ta... 203 4e-51 UniRef50_A8M069 NADH-quinone oxidoreductase subunit B 1 n=6 Tax=... 203 5e-51 UniRef50_A1RWL1 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 203 5e-51 UniRef50_A9KS72 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 202 1e-50 UniRef50_B6GAA3 Putative uncharacterized protein n=1 Tax=Collins... 202 1e-50 UniRef50_C0QR84 NADH-quinone oxidoreductase chain b (Nadh dehydr... 201 2e-50 UniRef50_Q492H7 NADH-quinone oxidoreductase subunit B n=225 Tax=... 201 2e-50 UniRef50_C1ZCK3 NADH dehydrogenase subunit B n=1 Tax=Planctomyce... 201 2e-50 UniRef50_Q1IPE7 NADH-quinone oxidoreductase subunit B 1 n=10 Tax... 201 2e-50 UniRef50_B2A054 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 200 3e-50 UniRef50_C9RJJ6 NADH-quinone oxidoreductase, B subunit n=1 Tax=F... 200 3e-50 UniRef50_B6YR59 NADH-quinone oxidoreductase subunit B n=5 Tax=Ba... 199 5e-50 UniRef50_A5TDF9 NADH-quinone oxidoreductase, B subunit n=2 Tax=p... 199 6e-50 UniRef50_C1A8Z3 NADH-quinone oxidoreductase chain B n=1 Tax=Gemm... 199 7e-50 UniRef50_C6PUG1 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 198 1e-49 UniRef50_Q1IZX2 NADH-quinone oxidoreductase subunit B n=16 Tax=c... 197 2e-49 UniRef50_C8W241 Hydrogenase, small subunit-like protein n=1 Tax=... 197 2e-49 UniRef50_Q1IL91 NADH-quinone oxidoreductase subunit B 2 n=4 Tax=... 197 3e-49 UniRef50_A9G9S9 NADH-quinone oxidoreductase subunit B 2 n=2 Tax=... 197 3e-49 UniRef50_A6UVJ5 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 197 4e-49 UniRef50_D2RET0 NADH-quinone oxidoreductase, B subunit n=1 Tax=A... 196 6e-49 UniRef50_B1ZUJ0 NADH-quinone oxidoreductase subunit B 2 n=13 Tax... 195 1e-48 UniRef50_B8HLE8 NAD(P)H-quinone oxidoreductase subunit K 2 n=94 ... 195 2e-48 UniRef50_A9A345 NADH-quinone oxidoreductase, B subunit n=1 Tax=N... 194 3e-48 UniRef50_A2BJ94 NAD(P)H-quinone oxidoreductase chain K n=10 Tax=... 194 3e-48 UniRef50_Q39SF9 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 194 3e-48 UniRef50_A1RZ48 NADH-quinone oxidoreductase, B subunit n=3 Tax=T... 194 3e-48 UniRef50_B3TC56 Putative NADH ubiquinone oxidoreductase, 20 Kd s... 193 3e-48 UniRef50_UPI00016C3AA7 NADH-quinone oxidoreductase, B subunit n=... 192 7e-48 UniRef50_Q1D8S3 NADH-quinone oxidoreductase subunit B n=2 Tax=Cy... 192 8e-48 UniRef50_B0SFT5 NADH-quinone oxidoreductase subunit B n=13 Tax=c... 191 2e-47 UniRef50_Q64DY8 F420H2-quinone oxidoreductase 45 kD subunit n=8 ... 191 2e-47 UniRef50_A0RY66 NADH-ubiquinone oxidoreductase, subunit B n=3 Ta... 191 2e-47 UniRef50_A0B811 F420H2 dehydrogenase subunit B n=6 Tax=Archaea R... 191 2e-47 UniRef50_A3THJ2 NADH dehydrogenase beta subunit n=2 Tax=Bacteria... 191 2e-47 UniRef50_B1KJU9 NADH-quinone oxidoreductase subunit B n=8 Tax=Pr... 190 3e-47 UniRef50_B1ZRT2 NADH-quinone oxidoreductase subunit B 1 n=4 Tax=... 190 4e-47 UniRef50_A7I7C9 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 190 4e-47 UniRef50_C7PSH0 NADH-quinone oxidoreductase, B subunit n=4 Tax=S... 190 4e-47 UniRef50_B1L7S0 F420H2 dehydrogenase subunit n=3 Tax=Archaea Rep... 189 5e-47 UniRef50_C9RKY2 NADH-quinone oxidoreductase, B subunit n=2 Tax=c... 189 6e-47 UniRef50_A4J659 NADH-quinone oxidoreductase subunit B n=34 Tax=F... 189 7e-47 UniRef50_Q26783 NADH dehydrogenase [ubiquinone] iron-sulfur prot... 189 8e-47 UniRef50_B0R3U2 NADH dehydrogenase-like complex subunit B n=11 T... 189 9e-47 UniRef50_Q0RRW7 NADH-quinone oxidoreductase subunit B n=5 Tax=Ba... 188 1e-46 UniRef50_A4EBM2 Putative uncharacterized protein n=1 Tax=Collins... 188 2e-46 UniRef50_D0L1N9 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 187 2e-46 UniRef50_A3PKI1 NADH-quinone oxidoreductase subunit B 2 n=6 Tax=... 187 3e-46 UniRef50_B2V8R1 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 187 4e-46 UniRef50_Q12F15 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 187 4e-46 UniRef50_D2EGC1 NADH-quinone oxidoreductase, B subunit n=1 Tax=C... 187 4e-46 UniRef50_Q2S5J2 NADH-quinone oxidoreductase subunit B n=4 Tax=Ba... 186 5e-46 UniRef50_A9GUX6 NADH-quinone oxidoreductase subunit B 1 n=10 Tax... 186 6e-46 UniRef50_C1VB41 NADH dehydrogenase subunit B n=1 Tax=Halogeometr... 186 8e-46 UniRef50_C5CEV5 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 185 1e-45 UniRef50_A5FW47 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 184 3e-45 UniRef50_C7DI98 NADH-quinone oxidoreductase, B subunit n=1 Tax=C... 182 6e-45 UniRef50_Q2T5T7 Formate hydrogenlyase subunit 7 n=21 Tax=Bacteri... 182 9e-45 UniRef50_B5E8B5 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 182 9e-45 UniRef50_B9L626 NADH-ubiquinone oxidoreductase 20 kDa subunit n=... 182 1e-44 UniRef50_B6YWP9 NADH dehydrogenase (Ubiquinone), 20 kDa subunit ... 182 1e-44 UniRef50_Q24ST9 Formate hydrogenlyase subunit 7 n=2 Tax=Desulfit... 181 2e-44 UniRef50_C6X0Z2 NADH-ubiquinone oxidoreductase chain B n=2 Tax=F... 180 5e-44 UniRef50_Q57936 Uncharacterized protein MJ0516 n=21 Tax=Euryarch... 179 6e-44 UniRef50_Q0W6T1 [NiFe]-hydrogenase, small subunit (EchC-like) n=... 179 8e-44 UniRef50_A6Q6W5 Ni-Fe hydrogenase, small subunit HycG n=3 Tax=Ep... 177 2e-43 UniRef50_C5A4Q2 Membrane bound oxidoreductase, MbxJ subunit (Mbx... 173 4e-42 UniRef50_A0L9R6 Membrane bound protein complex subunit mbxJ n=1 ... 173 5e-42 UniRef50_A4WJL4 NADH-quinone oxidoreductase, B subunit n=6 Tax=T... 172 9e-42 UniRef50_A3DM92 NADH-quinone oxidoreductase, B subunit n=1 Tax=S... 172 1e-41 UniRef50_C7JEU9 NADH-ubiquinone oxidoreductase 20 kDa subunit n=... 170 4e-41 UniRef50_B8IYV4 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 170 5e-41 UniRef50_A9BJL8 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 169 5e-41 UniRef50_Q6C2Q1 YALI0F06050p n=1 Tax=Yarrowia lipolytica RepID=Q... 169 7e-41 UniRef50_C7IWD0 Os01g0791600 protein n=3 Tax=Oryza sativa Japoni... 168 2e-40 UniRef50_Q21TB3 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 167 3e-40 UniRef50_B8D5A0 NADH-quinone oxidoreductase, B subunit n=1 Tax=D... 165 8e-40 UniRef50_UPI0001C31273 NADH-quinone oxidoreductase, B subunit n=... 164 2e-39 UniRef50_A3ETD3 Putative hydrogenase-3 (HycG) n=3 Tax=Leptospiri... 164 2e-39 UniRef50_A1SQ82 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 163 5e-39 UniRef50_C1XWY8 Ni,Fe-hydrogenase III small subunit n=1 Tax=Meio... 162 9e-39 UniRef50_C5U7Y6 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 160 3e-38 UniRef50_Q58758 Uncharacterized protein MJ1363 n=17 Tax=Euryarch... 160 3e-38 UniRef50_B5ZJ00 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 158 2e-37 UniRef50_D1B297 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 158 2e-37 UniRef50_Q978D5 Formate hydrogenlyase subunit 2 n=2 Tax=Thermopl... 157 3e-37 UniRef50_B1ZSE7 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 157 3e-37 UniRef50_A4YGN5 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 156 7e-37 UniRef50_D2PJN5 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 155 1e-36 UniRef50_A8A9X3 NADH-quinone oxidoreductase, B subunit n=1 Tax=I... 154 4e-36 UniRef50_A6DAC3 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 152 9e-36 UniRef50_UPI0001B52F0A hydrogenase 4, Fe-S subunit n=1 Tax=Shige... 149 1e-34 UniRef50_B5ICA0 NADH ubiquinone oxidoreductase, 20 Kd subunit fa... 148 2e-34 UniRef50_A5FW77 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 147 2e-34 UniRef50_Q2WGH7 NADH dehydrogenase subunit K (Fragment) n=1 Tax=... 146 7e-34 UniRef50_B2N3C8 Hydrogenase-4 component I n=2 Tax=Enterobacteria... 140 3e-32 UniRef50_Q0BPG7 Formate hydrogenlyase subunit 7 n=1 Tax=Granulib... 139 8e-32 UniRef50_Q6L0U2 Formate hydrogenlyase subunit 7 n=1 Tax=Picrophi... 138 1e-31 UniRef50_Q5FU78 Putative uncharacterized protein n=1 Tax=Glucono... 136 7e-31 UniRef50_A0LSU0 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 129 6e-29 UniRef50_B0SCU6 Metal (Ni/Fe) hydrogenase, small subunit n=2 Tax... 127 4e-28 UniRef50_Q04P25 Metal (Ni/Fe) hydrogenase, small subunit n=4 Tax... 125 2e-27 UniRef50_B9SD17 NADH-ubiquinone oxidoreductase I subunit j, puta... 122 1e-26 UniRef50_UPI000194DF39 PREDICTED: similar to NADH-ubiquinone oxi... 120 3e-26 UniRef50_Q2H7B9 Putative uncharacterized protein n=1 Tax=Chaetom... 120 4e-26 UniRef50_P80491 Coenzyme F420 hydrogenase subunit gamma n=27 Tax... 119 9e-26 UniRef50_Q9H3K5 My017 protein n=3 Tax=Eukaryota RepID=Q9H3K5_HUMAN 114 3e-24 UniRef50_B6YTV9 Coenzyme F420 hydrogenase gamma subunit n=1 Tax=... 107 3e-22 UniRef50_C5A2R7 Coenzyme F420 hydrogenase subunit gamma (FrhG) n... 103 5e-21 UniRef50_Q58591 F420-non-reducing hydrogenase vhu subunit G n=13... 101 2e-20 UniRef50_UPI0000EC9F96 NADH dehydrogenase [ubiquinone] iron-sulf... 100 4e-20 UniRef50_A6UVU9 Coenzyme F420 hydrogenase n=2 Tax=Euryarchaeota ... 100 7e-20 UniRef50_C1GND6 NADH-ubiquinone oxidoreductase 20 kDa subunit n=... 100 7e-20 UniRef50_C8X546 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 96 9e-19 UniRef50_A5UWN9 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 93 6e-18 UniRef50_Q8TYW2 Coenzyme F420-reducing hydrogenase, gamma subuni... 92 1e-17 UniRef50_B5YB68 NAD-reducing hydrogenase HoxS delta subunit n=2 ... 92 2e-17 UniRef50_Q00393 Coenzyme F420 hydrogenase subunit gamma n=3 Tax=... 92 2e-17 UniRef50_Q21RP8 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 91 3e-17 UniRef50_A0LLU1 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 91 3e-17 UniRef50_UPI0000E81815 PREDICTED: hypothetical protein n=1 Tax=G... 87 7e-16 UniRef50_Q3M430 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 87 7e-16 UniRef50_A1SU83 Hydrogen dehydrogenase n=23 Tax=Proteobacteria R... 86 1e-15 UniRef50_Q8TXX1 Coenzyme F420-reducing hydrogenase, gamma subuni... 85 1e-15 UniRef50_B8G3U7 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 85 2e-15 UniRef50_Q2LYD8 Nickel-dependent hydrogenase, small chain n=2 Ta... 85 3e-15 UniRef50_B7QG38 NADH-plastoquinone oxidoreductase, putative n=1 ... 83 9e-15 UniRef50_Q58136 Uncharacterized protein MJ0726 n=3 Tax=Methanoca... 82 1e-14 UniRef50_Q6A6I9 NADH dehydrogenase subunit n=2 Tax=Propionibacte... 80 6e-14 UniRef50_A5UM99 Coenzyme F420-reducing hydrogenase, gamma subuni... 78 2e-13 UniRef50_C1DUT4 Putative [NiFe] hydrogenase, delta subunit n=1 T... 78 4e-13 UniRef50_UPI0001C420D3 coenzyme F420 hydrogenase gamma subunit F... 77 4e-13 UniRef50_C0QEJ1 HynB n=4 Tax=Deltaproteobacteria RepID=C0QEJ1_DESAH 75 2e-12 UniRef50_B1L5Y5 Coenzyme F420-reducing hydrogenase, gamma subuni... 74 4e-12 UniRef50_A0LP54 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 74 4e-12 UniRef50_B9L8N0 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 74 6e-12 UniRef50_C6A155 NiFe hydrogenase I, subunit delta n=1 Tax=Thermo... 74 6e-12 UniRef50_A9B2V8 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 73 7e-12 UniRef50_D2BHA4 Nickel-dependent hydrogenase, group 3, small sub... 73 9e-12 UniRef50_B4SFA2 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 73 9e-12 UniRef50_C7J5D7 Os07g0116900 protein n=3 Tax=Oryza sativa RepID=... 71 3e-11 UniRef50_C6YT65 Predicted protein n=2 Tax=Francisella philomirag... 70 5e-11 UniRef50_C7MNR7 Hydrogenase (NiFe) small subunit HydA n=4 Tax=Co... 70 6e-11 UniRef50_B6YU80 Cytosolic NiFe-hydrogenase, delta subunit n=9 Ta... 65 2e-09 UniRef50_C1DUF2 Quinone-reactive Ni/Fe-hydrogenase small chain (... 62 2e-08 UniRef50_Q85WY3 ORF82a n=1 Tax=Pinus koraiensis RepID=Q85WY3_PINKO 61 3e-08 UniRef50_A7IHL6 Ni Fe-hydrogenase III large subunit-like protein... 55 2e-06 Sequences not found previously or not previously below threshold: UniRef50_Q0W6J6 Coenzyme F420-non-reducing hydrogenase (Methyl v... 75 2e-12 UniRef50_D2REQ3 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 73 8e-12 UniRef50_Q59113 Hydrogenase small beta subunit n=2 Tax=Bacteria ... 73 9e-12 UniRef50_Q50782 F420-non-reducing hydrogenase subunit G n=15 Tax... 73 1e-11 UniRef50_O28898 Methylviologen-reducing hydrogenase, subunit gam... 71 4e-11 UniRef50_C8QXK1 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 69 1e-10 UniRef50_B8ERX2 Hydrogen dehydrogenase n=1 Tax=Methylocella silv... 68 3e-10 UniRef50_C7NU23 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 68 3e-10 UniRef50_Q0W2X8 Coenzyme F420-reducing hydrogenase, gamma subuni... 68 4e-10 UniRef50_B1I576 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 67 4e-10 UniRef50_B5YFX1 F420-non-reducing hydrogenase subunit G n=1 Tax=... 67 5e-10 UniRef50_A0LKF2 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 67 7e-10 UniRef50_C7NPL1 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 66 1e-09 UniRef50_D1Z1F3 Coenzyme F420 hydrogenase subunit gamma n=1 Tax=... 65 1e-09 UniRef50_Q39QE2 F420-non-reducing hydrogenase subunit G n=5 Tax=... 65 2e-09 UniRef50_Q2KJQ3 HoxY n=4 Tax=Proteobacteria RepID=Q2KJQ3_CHRVI 65 3e-09 UniRef50_C8S807 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 64 4e-09 UniRef50_A8UU12 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 63 7e-09 UniRef50_B6YSK0 Sulfhydrogenase II, delta chain n=6 Tax=Thermoco... 61 3e-08 UniRef50_C9R9W3 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 61 3e-08 UniRef50_D2BG44 Ni/Fe hydrogenase, small subunit n=5 Tax=Dehaloc... 61 4e-08 UniRef50_P13061 Periplasmic [NiFe] hydrogenase small subunit n=6... 61 4e-08 UniRef50_B8FWY3 Hydrogenase (NiFe) small subunit HydA n=2 Tax=De... 60 8e-08 UniRef50_B1L3Q1 Coenzyme F420-reducing hydrogenase, gamma subuni... 60 8e-08 UniRef50_C0QP84 Putative [NiFe] hydrogenase, delta subunit n=1 T... 59 1e-07 UniRef50_P22319 NAD-reducing hydrogenase hoxS subunit delta n=6 ... 59 2e-07 UniRef50_Q06173 Periplasmic [NiFe] hydrogenase small subunit 1 n... 59 2e-07 UniRef50_B9KFD7 Quinone-reactive Ni/Fe-hydrogenase, small subuni... 58 2e-07 UniRef50_Q3ABV6 [Ni/Fe] hydrogenase, small subunit n=3 Tax=Clost... 58 3e-07 UniRef50_Q2IH66 Methyl-viologen-reducing hydrogenase, delta subu... 58 3e-07 UniRef50_Q2J4E9 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 58 3e-07 UniRef50_Q6ARY6 Related to periplasmic [NiFeSe] hydrogenase, sma... 57 7e-07 UniRef50_C5S9B0 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 56 1e-06 UniRef50_C8WGI4 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 55 2e-06 UniRef50_B4U5S1 Hydrogenase (NiFe) small subunit HydA n=1 Tax=Hy... 55 2e-06 UniRef50_B5EBV9 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 55 2e-06 UniRef50_Q1NJF2 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 55 2e-06 UniRef50_C0GED7 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 55 2e-06 UniRef50_Q0W6U0 Coenzyme F420-non-reducing hydrogenase (Methyl v... 55 2e-06 UniRef50_A4YF94 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 55 3e-06 UniRef50_B5IEA4 NADH ubiquinone oxidoreductase, 20 Kd subunit fa... 54 4e-06 UniRef50_C3XGH6 Ni/Fe-hydrogenase small subunit n=8 Tax=Proteoba... 54 5e-06 UniRef50_C2KSS0 Hydrogenase (Acceptor) n=3 Tax=Bacteria RepID=C2... 54 5e-06 UniRef50_B2TM84 [Ni/Fe] hydrogenase, small subunit n=2 Tax=Clost... 54 5e-06 UniRef50_D2LGK5 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 54 6e-06 UniRef50_B5EQ53 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 53 8e-06 UniRef50_B1ZXG1 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 53 1e-05 UniRef50_O33405 Uptake hydrogenase small subunit n=221 Tax=Bacte... 53 1e-05 UniRef50_A6QAV6 Ni-Fe hydrogenase, small subunit HupS n=3 Tax=Ep... 53 1e-05 UniRef50_Q30QL6 Ni-Fe hydrogenase, small subunit n=2 Tax=Campylo... 53 1e-05 UniRef50_A6DCC1 NI/FE-HYDROGENASE SMALL SUBUNIT n=1 Tax=Caminiba... 52 2e-05 UniRef50_B9L9V0 Hydrogenase n=1 Tax=Nautilia profundicola AmH Re... 51 3e-05 UniRef50_D1U6F3 Hydrogenase (NiFe) small subunit HydA n=1 Tax=De... 51 3e-05 UniRef50_D2QHS8 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 51 4e-05 UniRef50_Q31DZ5 Ni,Fe-hydrogenase small subunit n=4 Tax=Proteoba... 51 4e-05 UniRef50_P12635 Uptake hydrogenase small subunit n=8 Tax=Bacteri... 51 4e-05 UniRef50_A5GFC8 Hydrogenase (NiFe) small subunit HydA n=6 Tax=Pr... 51 4e-05 UniRef50_A0L609 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 50 5e-05 UniRef50_B0TDW1 Uptake [ni/fe] hydrogenase small subunit n=11 Ta... 50 7e-05 UniRef50_C3XE47 Quinone-reactive Ni/Fe hydrogenase n=1 Tax=Helic... 50 8e-05 UniRef50_A7BI79 Ni,Fe-hydrogenase small subunit n=2 Tax=Aquifica... 50 8e-05 UniRef50_A5I2W4 Hydrogenase small subunit n=13 Tax=Firmicutes Re... 50 9e-05 UniRef50_Q7VJP5 Putative uncharacterized protein n=3 Tax=Helicob... 50 1e-04 UniRef50_Q5HT18 Hydrogenase, (NiFe)/(NiFeSe) small subunit famil... 49 2e-04 UniRef50_P61429 Periplasmic [NiFe] hydrogenase small subunit 2 n... 49 2e-04 UniRef50_Q24VQ2 Ni,Fe-hydrogenase small subunit n=2 Tax=Desulfit... 49 2e-04 >UniRef50_P16433 Formate hydrogenlyase subunit 7 n=169 Tax=Bacteria RepID=HYCG_ECOLI Length = 255 Score = 286 bits (733), Expect = 4e-76, Method: Composition-based stats. Identities = 152/248 (61%), Positives = 181/248 (72%), Gaps = 2/248 (0%) Query: 1 MSPVLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFD 60 + P + P+T+DE MK LL+ I+RSAYVYRVDCGGCN CEIEIFA ++P+FD Sbjct: 5 LGPRDANGIPVPMTVDESIASMKASLLKKIKRSAYVYRVDCGGCNGCEIEIFATLSPLFD 64 Query: 61 AERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHD 120 AERFGIKVV SPRHADILLFTGAVTRAMR PALRA++SAPD KIC+SYGACG GGIFHD Sbjct: 65 AERFGIKVVPSPRHADILLFTGAVTRAMRSPALRAWQSAPDPKICISYGACGNSGGIFHD 124 Query: 121 LYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLW 180 LY VWGG+D IVP+DV+IPGCPPTPAAT++GFA+ALGLL+QKIHA + + L Sbjct: 125 LYCVWGGTDKIVPVDVYIPGCPPTPAATLYGFAMALGLLEQKIHARGPGELDEQPAEILH 184 Query: 181 PQIPPSQRIAIEREARRLAGYRQGREICDRLLRHLSDDPTGNRVNTWLRDADDPRLNSIV 240 + R+ ++REARRLAGYR GR+I D L L +V WL +DPRLN IV Sbjct: 185 GDMVQPLRVKVDREARRLAGYRYGRQIADDYLTQLGQGE--EQVARWLEAENDPRLNEIV 242 Query: 241 QQLFRVLR 248 L V+ Sbjct: 243 SHLNHVVE 250 >UniRef50_C7MLM8 Ni,Fe-hydrogenase III small subunit n=20 Tax=Bacteria RepID=C7MLM8_CRYCD Length = 283 Score = 273 bits (697), Expect = 6e-72, Method: Composition-based stats. Identities = 135/243 (55%), Positives = 171/243 (70%), Gaps = 2/243 (0%) Query: 7 QHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGI 66 Q+ +P LD++ + K LL DI+RS Y+YRVDCGGCN CEIEIF +TPVFDAERFGI Sbjct: 32 QYQLEPKVLDQKIAEAKAALLNDIKRSVYIYRVDCGGCNGCEIEIFGTLTPVFDAERFGI 91 Query: 67 KVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWG 126 K ++SPRHADIL++TGAVTRAMR+PALRAYE+APD K+ VSYGACG GGIFHD Y VWG Sbjct: 92 KNMASPRHADILVYTGAVTRAMRLPALRAYEAAPDPKLIVSYGACGCTGGIFHDNYCVWG 151 Query: 127 GSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPS 186 G+D + P+DV+IPGCPP+PA TI+GFA+ALGLL QK+H + G ++ IP Sbjct: 152 GTDKLFPVDVYIPGCPPSPAQTIYGFAMALGLLGQKLHEKHLVEGEGEQAPIMFADIPYK 211 Query: 187 QRIAIEREARRLAGYRQGREICDRLLRHL--SDDPTGNRVNTWLRDADDPRLNSIVQQLF 244 R +EREARR+AGY GR++ D ++ L D V+ + DPR I L Sbjct: 212 LRCELEREARRMAGYVYGRDLVDTFMQALEPEDGKVLTSVDALIEAESDPRKVEIYADLK 271 Query: 245 RVL 247 ++L Sbjct: 272 QIL 274 >UniRef50_C6ANV6 Hydrogenase-4 component I n=6 Tax=Gammaproteobacteria RepID=C6ANV6_AGGAN Length = 258 Score = 262 bits (670), Expect = 6e-69, Method: Composition-based stats. Identities = 153/247 (61%), Positives = 190/247 (76%), Gaps = 3/247 (1%) Query: 3 PVLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAE 62 P+ +S P ++DE KMK+ LL++I+RSAYVYRVDCGGCN CEIEIF+ ITPVFDAE Sbjct: 6 PMPVNGISTPFSIDENIAKMKQALLKNIQRSAYVYRVDCGGCNGCEIEIFSTITPVFDAE 65 Query: 63 RFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLY 122 RFGIKVV+SPRHADILLFTG+VTRAMR PA+RAY++APD KIC++YGACG GGGIFHDLY Sbjct: 66 RFGIKVVASPRHADILLFTGSVTRAMRTPAMRAYQAAPDPKICIAYGACGCGGGIFHDLY 125 Query: 123 SVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQ 182 VWGGSD IVP+DV+IPGCPPTPAATI+GFA+ALGLL QK+ + + +P Sbjct: 126 CVWGGSDQIVPVDVYIPGCPPTPAATIYGFAMALGLLDQKLKGKQEKADPNAEAKLRFPT 185 Query: 183 IPPSQRIAIEREARRLAGYRQGREICDRLLRHLSDD---PTGNRVNTWLRDADDPRLNSI 239 IP RI++EREARRLAGYRQG I ++ + +S+D P G R+ +L DPRL+ I Sbjct: 186 IPLDLRISLEREARRLAGYRQGGNIANQFMAMMSEDDKVPFGVRLGEYLEREADPRLSEI 245 Query: 240 VQQLFRV 246 + +L + Sbjct: 246 INRLHAI 252 >UniRef50_A7GWN3 HsdS n=9 Tax=Proteobacteria RepID=A7GWN3_CAMC5 Length = 274 Score = 258 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 111/243 (45%), Positives = 153/243 (62%), Gaps = 10/243 (4%) Query: 14 TLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPR 73 T ++ T K++ L++I+RS VYR+DCG CN CEIEIFAAITP++D ERFG K+V++PR Sbjct: 12 TANDLTAKLEH--LKNIKRSFSVYRIDCGSCNGCEIEIFAAITPMWDPERFGFKLVANPR 69 Query: 74 HADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVP 133 HADIL+ +G VTR M P LRAYE+APD KI V++GACG GGIFHD YSVWGG D I+P Sbjct: 70 HADILICSGPVTRQMYYPLLRAYEAAPDPKIVVAFGACGSSGGIFHDAYSVWGGIDKIIP 129 Query: 134 IDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQI-PPSQRIAIE 192 +DV+IPGCPP PA+ I+G +ALG++ QK+H Y D + + I ++ Sbjct: 130 VDVYIPGCPPHPASVIYGLGMALGIIDQKLHKKSYEDDSTLPPPVEKSVIGDILFERDLQ 189 Query: 193 REARRLAGYRQGREICDRLLRHLS-----DDPTGNRVNTW--LRDADDPRLNSIVQQLFR 245 E++RL Y GR + D+ + + DP R ++ +DPR + L Sbjct: 190 AESKRLMSYIFGRALFDKYMSAIKTASDVHDPNSARTAMLEAIKKEEDPRYAECMALLHN 249 Query: 246 VLR 248 + Sbjct: 250 DVY 252 >UniRef50_B6YT72 Hydrogenase 4, component I or formate hydrogen lyase, subunit 7 n=3 Tax=cellular organisms RepID=B6YT72_THEON Length = 266 Score = 239 bits (611), Expect = 4e-62, Method: Composition-based stats. Identities = 76/250 (30%), Positives = 119/250 (47%), Gaps = 32/250 (12%) Query: 32 RSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMP 91 +S +V+ VD G CN C+IEI +TP +DAER GIK+V SPRHAD LL +G +TR Sbjct: 5 KSVWVFHVDSGSCNGCDIEILDVLTPYYDAERLGIKLVPSPRHADALLVSGPLTRQTYYA 64 Query: 92 ALRAYESA-PDHKICVSYGACGVGGGIFHDLYSVW-------------GGSDTIV----- 132 AYE+ P +I V+ G C GGIF++ Y ++ GG + ++ Sbjct: 65 VKAAYEAMPPKPRIVVAIGTCASSGGIFYNGYPIYNPNPERGSDRLRTGGIEVLLAEYGK 124 Query: 133 PIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQRI--A 190 D++IPGCPP+P ++G A LGL ++K+ Y ++ + P+ P +RI Sbjct: 125 KPDMYIPGCPPSPEEILYGLAQLLGLKEKKMKGEYY---YADEIEFVLPERPIEERIYLT 181 Query: 191 IEREARRLAGYRQGREICDRLLRHLSDDPTGNR--------VNTWLRDADDPRLNSIVQQ 242 + RR+ GY ++ + + + V + D R+ ++ Sbjct: 182 LRESLRRVVGYFDREKVLEDFMALVEKAQESENPRERLHELVIGYFLREKDSRVKFAIRF 241 Query: 243 LFRVLRGLHD 252 L L D Sbjct: 242 LENEYWRLKD 251 >UniRef50_B6YTX0 Hydrogenase 4, component I or formate hydrogen lyase, subunit 7 n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YTX0_THEON Length = 273 Score = 223 bits (568), Expect = 4e-57, Method: Composition-based stats. Identities = 73/256 (28%), Positives = 117/256 (45%), Gaps = 37/256 (14%) Query: 32 RSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMP 91 RS +V+ ++ G CN C+IEI +TP +D ERFGIK+V SPRHA LL +G +TR Sbjct: 8 RSIWVFHLNTGSCNGCDIEIIDVLTPFYDVERFGIKLVGSPRHAHALLVSGPLTRQAYYG 67 Query: 92 ALRAYESA-PDHKICVSYGACGVGGGIFHDLYSV---------------WGGSDTIV--- 132 A ++ P+ ++ V+ G C GGIF++ Y V GG ++ Sbjct: 68 AKETIKAMPPEPRVIVAIGTCTCSGGIFYNGYPVYRRPESGREGSEYPRRGGIAELIADL 127 Query: 133 --------PIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIP 184 P+ ++IPGCPP P I+G A +GL+++K+ +Y D V + + Sbjct: 128 RDEGEKVGPV-IYIPGCPPRPEEIIYGIAQLVGLVEKKLSYQEYSDEL-VPFKLPEGPLE 185 Query: 185 PSQRIAIEREARRLAGYRQGREICDRLLRHLSDDPTG----NRVNTWLRDAD----DPRL 236 R+ + R L GY +I + + + + + ++D D RL Sbjct: 186 ERIRLTLMERLRHLVGYLDREKILEDFMGLVKEAEKSENPREELARLVKDYAAKCGDVRL 245 Query: 237 NSIVQQLFRVLRGLHD 252 + L R + D Sbjct: 246 GFCMMLLEREYWRVKD 261 >UniRef50_O21272 NADH-ubiquinone oxidoreductase 20 kDa subunit n=5 Tax=Eukaryota RepID=NDUS7_RECAM Length = 182 Score = 219 bits (558), Expect = 7e-56, Method: Composition-based stats. Identities = 44/152 (28%), Positives = 74/152 (48%), Gaps = 3/152 (1%) Query: 19 TQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADIL 78 KM + + S + G C +E+ + +D +RFGI SPR +D++ Sbjct: 33 VSKMDELVNWARKGSLWPMTF---GLACCAVEMMHSAASRYDLDRFGIIFRPSPRQSDVM 89 Query: 79 LFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWI 138 + G +T M + Y+ + + VS G+C GGG +H YSV G D IVP+D+++ Sbjct: 90 IVAGTLTNKMAPALRKVYDQMSEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYV 149 Query: 139 PGCPPTPAATIHGFAVALGLLQQKIHAVDYRD 170 PGCPPT A ++G +++ + + Sbjct: 150 PGCPPTAEALLYGLLQLQKKIKRSRKTLYWLQ 181 >UniRef50_Q9DC70 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial n=57 Tax=cellular organisms RepID=NDUS7_MOUSE Length = 224 Score = 219 bits (557), Expect = 8e-56, Method: Composition-based stats. Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 4/168 (2%) Query: 2 SPVLTQHVSQPITLDEQT-QKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFD 60 V+ + P + E K+ + R S + G C +E+ P +D Sbjct: 57 GAVVPKLSHLPRSRAEYVVTKLDDLINWARRSSLWPMTF---GLACCAVEMMHMAAPRYD 113 Query: 61 AERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHD 120 +RFG+ +SPR AD+++ G +T M + Y+ P+ + VS G+C GGG +H Sbjct: 114 MDRFGVVFRASPRQADVMIVAGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHY 173 Query: 121 LYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDY 168 YSV G D IVP+D+++PGCPPT A ++G ++++ + Sbjct: 174 SYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQRKIKREQKLKIW 221 >UniRef50_Q0W2C0 Hydrogenase, small subunit-like protein (HycG-like) n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W2C0_UNCMA Length = 247 Score = 218 bits (555), Expect = 1e-55, Method: Composition-based stats. Identities = 63/160 (39%), Positives = 98/160 (61%) Query: 5 LTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERF 64 L ++ +++++ + + RS + VD G CN CE+E+ + ++D ERF Sbjct: 88 LASKAKPDFDVESSGRELEKKIKKAFGRSLAIREVDAGSCNGCEVEVNSLSNAIYDIERF 147 Query: 65 GIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSV 124 G+ +V+SPRHAD LL TG VTR M +++Y + PD K+ ++ GAC + GGIF D Y+V Sbjct: 148 GLHIVASPRHADALLVTGPVTRNMERGLMQSYNATPDPKMVIAMGACAITGGIFRDSYAV 207 Query: 125 WGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIH 164 + G D +VP+DV+IPGCPP P A I G +A+ ++K Sbjct: 208 YNGVDALVPVDVYIPGCPPRPQAIIQGIMLAIDRWEEKRK 247 >UniRef50_O75251 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial n=638 Tax=cellular organisms RepID=NDUS7_HUMAN Length = 213 Score = 216 bits (551), Expect = 5e-55, Method: Composition-based stats. Identities = 49/163 (30%), Positives = 80/163 (49%), Gaps = 4/163 (2%) Query: 3 PVLTQHVSQPITLDEQT-QKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDA 61 P +P + E K+ + R S + G C +E+ P +D Sbjct: 47 PKARAVAPKPSSRGEYVVAKLDDLVNWARRSSLWPMTF---GLACCAVEMMHMAAPRYDM 103 Query: 62 ERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDL 121 +RFG+ +SPR +D+++ G +T M + Y+ P+ + VS G+C GGG +H Sbjct: 104 DRFGVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYS 163 Query: 122 YSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIH 164 YSV G D IVP+D++IPGCPPT A ++G ++++ Sbjct: 164 YSVVRGCDRIVPVDIYIPGCPPTAEALLYGILQLQRKIKRERR 206 >UniRef50_B5YKI3 NADH-quinone oxidoreductase subunit B 1 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=NUOB1_THEYD Length = 199 Score = 216 bits (551), Expect = 5e-55, Method: Composition-based stats. Identities = 49/202 (24%), Positives = 84/202 (41%), Gaps = 20/202 (9%) Query: 5 LTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERF 64 + Q + + + + S + G C IE+ A +D +RF Sbjct: 14 IEQGIKIVPAANTIITTLDKIASWGRCSSLWPLTF---GLACCAIEMMATAASHYDLDRF 70 Query: 65 GIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSV 124 GI + ++PR AD+++ G VT+ M + Y P+ + ++ G+C GGIF + YS Sbjct: 71 GIIMRATPRQADVMIIAGTVTKKMAPVIVNLYHQMPEPRYVIAMGSCACSGGIF-NTYST 129 Query: 125 WGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIP 184 G D I+P+DV+IPGCPP P A I G ++ + Sbjct: 130 VQGVDEILPVDVYIPGCPPRPEALIEGLLKLQEKIK----------------TEPHKKTG 173 Query: 185 PSQRIAIEREARRLAGYRQGRE 206 + + +++R Y R+ Sbjct: 174 CLSGVCLIDKSQRRCSYESCRD 195 >UniRef50_B0TH78 NADH-quinone oxidoreductase subunit B n=5 Tax=Bacteria RepID=NUOB_HELMI Length = 175 Score = 216 bits (549), Expect = 8e-55, Method: Composition-based stats. Identities = 49/171 (28%), Positives = 74/171 (43%), Gaps = 4/171 (2%) Query: 1 MSPVLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFD 60 + + V + I + ++ S + G C IE+ A FD Sbjct: 7 VDTLSEGQVDELIKKNIIMTSLEAVFNWARGNSLWPL---SSGLACCAIEMMATGASRFD 63 Query: 61 AERFGIK-VVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFH 119 RFG + SPR AD+++ G +T M R YE P+ K ++ G+C GG F Sbjct: 64 MARFGYEVFRPSPRQADLIIIAGTLTWKMAPAIQRVYEQMPEPKWIIAMGSCACTGGPFA 123 Query: 120 DLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRD 170 D Y+V G D ++P+DV++PGCPP P A + GF +Q Sbjct: 124 DSYAVVPGVDKVIPVDVYVPGCPPRPEALLDGFLKLKAKIQNPAKVGLKHG 174 >UniRef50_B6YU96 Membrane bound hydrogenase, NiFe-hydrogenase small subunit n=13 Tax=cellular organisms RepID=B6YU96_THEON Length = 175 Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats. Identities = 66/169 (39%), Positives = 94/169 (55%) Query: 3 PVLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAE 62 P + + E +K L + I RS +V+ V+ G CN C+IEI AA+TP +DAE Sbjct: 6 PADQNRTNGTTSEREMLEKRIAQLCRFIGRSPWVFHVNSGSCNGCDIEIIAALTPRYDAE 65 Query: 63 RFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLY 122 RFG+K+V SPRHAD+LL TG VT YE PD KI ++ G+C GG +F++ Sbjct: 66 RFGVKLVGSPRHADVLLVTGPVTDQSLERVKLVYEQTPDPKIVIAVGSCPTGGSVFYESP 125 Query: 123 SVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDP 171 I+P+DV++PGCPP P A ++G +AL L + + Sbjct: 126 FTNAPLSNIIPVDVYVPGCPPRPEAILYGVVLALEKLAKILKGEVPEGE 174 >UniRef50_C5A2Q7 Formate hydrogenlyase II subunit H (Mhy2H) n=3 Tax=Thermococcus RepID=C5A2Q7_THEGJ Length = 283 Score = 214 bits (545), Expect = 2e-54, Method: Composition-based stats. Identities = 71/252 (28%), Positives = 123/252 (48%), Gaps = 34/252 (13%) Query: 32 RSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMP 91 RS YV+ +D G CN CEIE+F +TP +DAER G+++ +SPRHA + TG +TR Sbjct: 4 RSLYVFHLDTGACNGCEIELFDILTPYYDAERLGVRLAASPRHAHAMAATGPLTRQAYYA 63 Query: 92 ALRAYESA-PDHKICVSYGACGVGGGIFHDLYSV---------------WGGSDTIV--- 132 A A ++ P +I V+ G C GGIF++ Y + GG +V Sbjct: 64 AKEAIKAMPPKPRIIVAIGTCACSGGIFYNGYPIYRRPESGREGQEYPRRGGIFELVQDL 123 Query: 133 --------PIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIP 184 P+ V+IPGCPP P ++G A+ALGL+++++ Y + G + I Sbjct: 124 RDEGEYVGPV-VYIPGCPPRPEEILYGVALALGLVEKQVKGEYYTEEVGFELPEY--PIE 180 Query: 185 PSQRIAIEREARRLAGYRQGREICDRLLRHLSDDPTGNRVNTWLR----DADDPRLNSIV 240 R+++ + + GY ++ + + ++ + ++ ++ DPR++ + Sbjct: 181 ERIRLSLRERLKYVVGYFDREKVLEDFMELVAKAKSAEELHGLIQGYCLKNPDPRVSLAM 240 Query: 241 QQLFRVLRGLHD 252 + L R L + Sbjct: 241 RVLEREFLRLKE 252 >UniRef50_A6LXQ4 NADH-quinone oxidoreductase subunit B n=4 Tax=Bacteria RepID=NUOB_CLOB8 Length = 169 Score = 213 bits (542), Expect = 5e-54, Method: Composition-based stats. Identities = 50/155 (32%), Positives = 76/155 (49%), Gaps = 4/155 (2%) Query: 6 TQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFG 65 + + + I + K+ L S + G C IE+ AA +D RFG Sbjct: 8 DKEIQEQIEKNIILTKLDDTLNYFRAHSFWPLTF---GLACCAIEMMAAGGARYDIARFG 64 Query: 66 IK-VVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSV 124 + +SPR AD+++ G +T M + Y+ P+ K ++ G+C GG F D Y+V Sbjct: 65 YEVFRASPRQADLMIVAGTITEKMAPIVKKIYDQMPEPKWVIAMGSCATSGGPFVDSYNV 124 Query: 125 WGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLL 159 G+DT +P+DV+IPGCPP P A IHG + Sbjct: 125 VPGADTFLPVDVYIPGCPPRPEALIHGLLTLKEKI 159 >UniRef50_A8MBS9 NADH-quinone oxidoreductase, B subunit n=5 Tax=Thermoproteaceae RepID=A8MBS9_CALMQ Length = 374 Score = 212 bits (539), Expect = 1e-53, Method: Composition-based stats. Identities = 57/217 (26%), Positives = 90/217 (41%), Gaps = 16/217 (7%) Query: 23 KRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTG 82 + S + + C +E A P +DAER+G + PR + ++ G Sbjct: 25 DSLASWGTKFSIWPAHLVT---ACCGVEFAHASAPGYDAERWGFLPIFGPRQTNSIVIEG 81 Query: 83 AVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCP 142 VTR M AYE P K ++ G+C + GG+F + Y V + IVP+D W+ GCP Sbjct: 82 TVTRKMARIVKTAYEQMPYPKFVIAMGSCAMEGGVFWNSYHVVR-VNEIVPVDAWVMGCP 140 Query: 143 PTPAATIHGFAVALGLLQQK-IHAVDYRDPTGVTM--QPLWPQIPPSQRIAIEREARRL- 198 PTP A I + ++ K + +P ++ +P PQ PP+ IE E + Sbjct: 141 PTPEAVIRAIRMVQSKIEGKEVKPNIRPNPVDLSKVLKPDKPQRPPNPPHRIEFELIKDI 200 Query: 199 --------AGYRQGREICDRLLRHLSDDPTGNRVNTW 227 + G+++ D L D V Sbjct: 201 NVCKPAANVKWELGQKLIDGFKESLKDGVKNTAVRGV 237 >UniRef50_Q1AVI4 NADH-quinone oxidoreductase subunit B n=15 Tax=Bacteria RepID=NUOB_RUBXD Length = 251 Score = 212 bits (539), Expect = 1e-53, Method: Composition-based stats. Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 5/186 (2%) Query: 15 LDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGI-KVVSSPR 73 + T + + S + + G C IE+ + D ERFG SPR Sbjct: 10 PNIITTSTDKLFNWARKNSLWPLQF---GLACCAIEMMSTGMAHNDLERFGAGFFAGSPR 66 Query: 74 HADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVP 133 AD+++ +G V+ M R YE P+ K ++ GAC + GG F D YSV G+D ++P Sbjct: 67 QADVMIVSGTVSTKMAERMTRLYEQMPEPKWVIAMGACAISGGPFLDGYSVLMGADRVIP 126 Query: 134 IDVWIPGCPPTPAATIHGFAVALGLLQQKIH-AVDYRDPTGVTMQPLWPQIPPSQRIAIE 192 +DV++PGCPP P A I G ++++ + P V + + P + Sbjct: 127 VDVYVPGCPPRPEALIFGIMTLQKKIEREQQVGYEKPRPALVDEEGNIREYLPEREYRQI 186 Query: 193 REARRL 198 E + Sbjct: 187 SEGKAH 192 >UniRef50_Q0BSK3 NADH-quinone oxidoreductase subunit B n=31 Tax=cellular organisms RepID=NUOB_GRABC Length = 194 Score = 211 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 45/143 (31%), Positives = 74/143 (51%), Gaps = 3/143 (2%) Query: 19 TQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADIL 78 + + + S + G C +E+ A P +D +RFG+ +SPR +D++ Sbjct: 48 VANLDKLVNWARTGSLWPMTF---GLACCAVEMIHAYMPRYDLDRFGVIPRASPRQSDVM 104 Query: 79 LFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWI 138 + G +T M R Y+ P+ + +S G+C GGG +H YSV G D IVP+DV++ Sbjct: 105 IVAGTLTNKMAPALRRVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYV 164 Query: 139 PGCPPTPAATIHGFAVALGLLQQ 161 PGCPPT A ++G +++ Sbjct: 165 PGCPPTAEALVYGIMQLQKKIRR 187 >UniRef50_A3DKH2 NADH-quinone oxidoreductase, B subunit n=5 Tax=cellular organisms RepID=A3DKH2_STAMF Length = 165 Score = 211 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 64/144 (44%), Positives = 90/144 (62%) Query: 17 EQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHAD 76 E + + IR + ++ + G CN C+IE+ AAITP++D ERFGIK+ S RHAD Sbjct: 14 ESPKDGGDSKYKIIRYTPWLIHFNTGACNGCDIEVLAAITPLYDPERFGIKLAPSIRHAD 73 Query: 77 ILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDV 136 IL+ TGAVT+ R YE PD K V+ GAC + GG+FH+ YSV G+D ++P+D+ Sbjct: 74 ILVVTGAVTKKAAERLKRLYEQMPDPKFVVAVGACAISGGVFHNSYSVLAGTDKVIPVDI 133 Query: 137 WIPGCPPTPAATIHGFAVALGLLQ 160 ++PGCPP P A + G L L+ Sbjct: 134 YVPGCPPRPEAILDGIVKLLKRLE 157 >UniRef50_A1ASR2 NADH ubiquinone oxidoreductase, 20 kDa subunit n=3 Tax=cellular organisms RepID=A1ASR2_PELPD Length = 179 Score = 211 bits (536), Expect = 2e-53, Method: Composition-based stats. Identities = 66/161 (40%), Positives = 98/161 (60%) Query: 22 MKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFT 81 +K + RS +VY + GGCN C+IE+ +TP +D ERFGIK+V SPRHAD++L Sbjct: 2 LKNLCQKVFGRSLWVYHANSGGCNGCDIEVLNVLTPYYDVERFGIKLVGSPRHADVMLCQ 61 Query: 82 GAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGC 141 G R+ RAY + P K+ + G+C GGGI+HD Y+V G + ++P++ ++PGC Sbjct: 62 GPAMRSTGKALQRAYAAMPGPKLVFAIGSCACGGGIWHDSYAVHGPVEKLIPVNYYVPGC 121 Query: 142 PPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQ 182 PP P A I G AVA GL+ +K V+++ + M P+ Sbjct: 122 PPRPEAIIWGVAVAAGLVDKKTAPVEFKQVSDFPMPRYHPE 162 >UniRef50_C7NUN9 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Halorhabdus utahensis DSM 12940 RepID=C7NUN9_HALUD Length = 183 Score = 209 bits (533), Expect = 5e-53, Method: Composition-based stats. Identities = 57/157 (36%), Positives = 86/157 (54%) Query: 22 MKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFT 81 M R + RS ++ ++CG CN C+IE A+ P +D ERFGI+ +PRHAD+L+ T Sbjct: 1 MGRIIDWARNRSPWILHMNCGSCNGCDIETLDALMPRYDVERFGIQQKDTPRHADVLVAT 60 Query: 82 GAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGC 141 G VT+ M R YE P+ K+ ++ G+C GG+F D Y+ G D ++P+D+++PGC Sbjct: 61 GPVTKQMAPRLERIYEQMPEPKLVIAAGSCAATGGVFQDCYNCHEGIDDVIPVDMYVPGC 120 Query: 142 PPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQP 178 P +P I G L Q+ A +Q Sbjct: 121 PISPETLIDGIVALLEEAGQEAKAERLAAAKPEIVQG 157 >UniRef50_C7IG01 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IG01_9CLOT Length = 266 Score = 209 bits (533), Expect = 5e-53, Method: Composition-based stats. Identities = 64/145 (44%), Positives = 86/145 (59%) Query: 15 LDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRH 74 + +K+ + + RS + VD G CN C+ EI A P D ERFGI V+SPRH Sbjct: 122 YELIGKKLNEKVAKKFGRSLNIREVDAGSCNGCDYEIQALNGPYNDIERFGIHFVASPRH 181 Query: 75 ADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPI 134 AD+LL TG V+R M ++ Y + P K+ V+ GAC GG+F D Y+ G DTI+P+ Sbjct: 182 ADMLLVTGCVSRNMEEALVKTYNATPSPKLVVAAGACACSGGLFKDSYAGRNGIDTILPV 241 Query: 135 DVWIPGCPPTPAATIHGFAVALGLL 159 DV+IPGCPP P A I+G +G L Sbjct: 242 DVYIPGCPPRPQALIYGILKGIGRL 266 >UniRef50_D2R6Y4 NADH-quinone oxidoreductase, B subunit n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R6Y4_9PLAN Length = 227 Score = 208 bits (530), Expect = 1e-52, Method: Composition-based stats. Identities = 55/192 (28%), Positives = 84/192 (43%), Gaps = 8/192 (4%) Query: 4 VLTQHVSQPITLDEQ--TQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDA 61 +L ++E T +++ + + S + G C IE+ AA +D Sbjct: 19 MLASQPWIEARVEENVFTTSVEQAINWARQSSIWPMTF---GLACCAIEMMAAGASRYDM 75 Query: 62 ERFGI-KVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGI-FH 119 +RFG ++PR AD+++ G VT M R Y PD K ++ GAC VGGG F Sbjct: 76 DRFGAGAFRATPRQADLMIVAGTVTYKMASRVRRLYNMMPDPKFVIAMGACTVGGGPYFK 135 Query: 120 DLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQ-KIHAVDYRDPTGVTMQP 178 Y V G D +VP+DV+IPGCPP P A + G ++ +I +T+ Sbjct: 136 WGYHVVKGVDLVVPVDVYIPGCPPRPEALLEGLMRIQDKIKGHRIAKKKSTGSGFLTVGE 195 Query: 179 LWPQIPPSQRIA 190 P + Sbjct: 196 KVEDELPIPHHS 207 >UniRef50_A6L170 NADH-quinone oxidoreductase subunit B n=35 Tax=Bacteroidales RepID=NUOB_BACV8 Length = 198 Score = 208 bits (530), Expect = 1e-52, Method: Composition-based stats. Identities = 52/165 (31%), Positives = 76/165 (46%), Gaps = 10/165 (6%) Query: 22 MKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKV-VSSPRHADILLF 80 + + S + + C IE A +D RFG +V +SPR AD+++ Sbjct: 41 LDDLINWGRSNSLWPLTFAT---SCCGIEFMAVGAARYDFARFGFEVARASPRQADMIMV 97 Query: 81 TGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPG 140 G +T M R Y+ D K ++ G C + GG F Y V G D I+P+DV+IPG Sbjct: 98 AGTITHKMAPVLKRLYDQMADPKYVIAVGGCAISGGPFKKSYHVLNGVDKILPVDVYIPG 157 Query: 141 CPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPP 185 CPP P A ++G LQ+K+ + GV + PQ P Sbjct: 158 CPPRPEALLYGMI----QLQRKVKLEKFFG--GVNRKENEPQNPE 196 >UniRef50_B4U8H3 NADH-quinone oxidoreductase subunit B n=4 Tax=Bacteria RepID=NUOB_HYDS0 Length = 177 Score = 208 bits (530), Expect = 1e-52, Method: Composition-based stats. Identities = 51/165 (30%), Positives = 76/165 (46%), Gaps = 5/165 (3%) Query: 19 TQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADIL 78 T + L R + + + G C IE+ A FD +R G+ +SPR AD+L Sbjct: 12 TTTVDELLSWGRRNALWPVTI---GLACCAIEMMHAAASRFDIDRLGMIFRASPRQADVL 68 Query: 79 LFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWI 138 + G V + ++ P+ K C+S G C GG F YS G D I+P+DV+I Sbjct: 69 IVAGTVVNKVAPMLKLVWDQMPEPKWCISMGGCASAGGPFP-TYSTLQGIDRIIPVDVYI 127 Query: 139 PGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQI 183 PGCPPTP I+G +++K Y + L P++ Sbjct: 128 PGCPPTPQGLIYGLLELQRKIREK-KVTRYEKAFEEFKKDLSPEL 171 >UniRef50_A5UXK1 NADH-quinone oxidoreductase subunit B 1 n=13 Tax=Bacteria RepID=NUOB1_ROSS1 Length = 268 Score = 206 bits (525), Expect = 4e-52, Method: Composition-based stats. Identities = 50/153 (32%), Positives = 72/153 (47%), Gaps = 4/153 (2%) Query: 11 QPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIK-VV 69 + M+R R S + G C IE+ A FD RFG + Sbjct: 10 EAEKHGVFLTTMQRFYNWGRRSSIWPLSF---GLACCAIEMMATGLARFDLARFGAEMFR 66 Query: 70 SSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSD 129 +SPR AD+++ G VT+ M +R Y P+ + +S GAC GG F D Y+V G D Sbjct: 67 ASPRQADLMIVAGTVTKKMAPQVVRLYNQMPEPRYVISMGACATSGGPFRDGYNVLRGID 126 Query: 130 TIVPIDVWIPGCPPTPAATIHGFAVALGLLQQK 162 ++P+DV+IPGCPP P A +H + + Sbjct: 127 LLIPVDVYIPGCPPRPEALLHALMTLQKQIDAQ 159 >UniRef50_B9L8U0 Hydrogenase-4 component I n=2 Tax=Epsilonproteobacteria RepID=B9L8U0_NAUPA Length = 164 Score = 206 bits (525), Expect = 4e-52, Method: Composition-based stats. Identities = 60/145 (41%), Positives = 85/145 (58%) Query: 26 LLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVT 85 + ++S ++ + GGCN C+IEI AA+ P +D ERFG+ +P+ +DILL TG VT Sbjct: 4 FTKFRKKSPWILHYNTGGCNGCDIEILAALAPKYDIERFGMLNRGNPKQSDILLVTGPVT 63 Query: 86 RAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTP 145 + R R Y P+ K+ V+ GAC GGGIF D Y V G D I+P+DVWIPGC P Sbjct: 64 KRCRDVLRRLYLEMPEPKVVVAMGACAHGGGIFRDFYHVENGVDNIIPVDVWIPGCAPRV 123 Query: 146 AATIHGFAVALGLLQQKIHAVDYRD 170 A I G A+ + ++K ++ Sbjct: 124 EAVIDGMVEAVKIWEKKTKEKEFMR 148 >UniRef50_B2IID4 NADH ubiquinone oxidoreductase 20 kDa subunit n=9 Tax=Bacteria RepID=B2IID4_BEII9 Length = 177 Score = 206 bits (523), Expect = 7e-52, Method: Composition-based stats. Identities = 59/158 (37%), Positives = 86/158 (54%), Gaps = 1/158 (0%) Query: 2 SPVLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDA 61 P LT+ + ++ + RS + VD G CN CE+EI A +D Sbjct: 11 KPPLTEAGPTDGEIAALAAELDHLARSRLGRSLAIREVDAGSCNGCELEINALGNAFYDL 70 Query: 62 ERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDL 121 ERFG++ V+SPRHAD+LL TG VT MR LR Y++ P+ K V+ G C +G G+F + Sbjct: 71 ERFGLRFVASPRHADVLLVTGPVTHNMREALLRTYDATPNPKWVVAAGTCALGEGVFAES 130 Query: 122 YSV-WGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGL 158 Y+ GG ++ +D++IPGCPPTP + G + Sbjct: 131 YACQKGGVSAVIAVDLYIPGCPPTPTDLLKGLLALITK 168 >UniRef50_B3QY47 NADH-quinone oxidoreductase subunit B 2 n=8 Tax=Bacteria RepID=NUOB2_CHLT3 Length = 195 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 56/178 (31%), Positives = 87/178 (48%), Gaps = 8/178 (4%) Query: 19 TQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADIL 78 + L S + G C IE+ A +D ERFGI SSPR +D++ Sbjct: 15 ITAAENVLNWARLSSLWPMGF---GLACCAIEMMATNASNYDLERFGIFPRSSPRQSDLM 71 Query: 79 LFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHD-LYSVWGGSDTIVPIDVW 137 + G VT M +R YE P+ + +S G+C GG + + Y V G D I+P+DV+ Sbjct: 72 IVAGTVTFKMAERVVRLYEQMPEPRYVLSMGSCSNCGGPYWEHGYHVVKGVDRIIPVDVY 131 Query: 138 IPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIEREA 195 +PGCPP P A I G L++++ A D R+ ++ L P+ ++ + +E A Sbjct: 132 VPGCPPRPEALIGGLMKVQELIREEKFAGDRREA----IERLKPKKVKAEDVIVETSA 185 >UniRef50_B6IT61 Hydrogenase-4 component I n=4 Tax=Bacteria RepID=B6IT61_RHOCS Length = 196 Score = 205 bits (521), Expect = 1e-51, Method: Composition-based stats. Identities = 65/177 (36%), Positives = 93/177 (52%), Gaps = 1/177 (0%) Query: 8 HVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIK 67 T++ +++ + + RS + +VD G CNACE+EI A PV+D ERFG Sbjct: 19 PAPADATVEALARRLDTASRRRLGRSLAIRQVDAGSCNACEMEIHALNNPVYDLERFGFS 78 Query: 68 VVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGG 127 V+SPRHAD+LL TG VT MR L+ +E+ PD K V+ G C + GG F D Y+V GG Sbjct: 79 FVASPRHADVLLVTGPVTTNMREALLKTWEATPDPKWVVALGQCAIDGGPFADSYAVVGG 138 Query: 128 SDTIVPIDVWIPGCPPTPAATIHGFAVALG-LLQQKIHAVDYRDPTGVTMQPLWPQI 183 + +VP+D+ IPGCPP P + + + P G + P + Sbjct: 139 VEKVVPVDLMIPGCPPRPVDILAALVALIEAEARPPSRPAASGTPAGAPRERREPTL 195 >UniRef50_B1ZSE5 NADH ubiquinone oxidoreductase 20 kDa subunit n=14 Tax=Bacteria RepID=B1ZSE5_OPITP Length = 279 Score = 205 bits (521), Expect = 1e-51, Method: Composition-based stats. Identities = 63/150 (42%), Positives = 99/150 (66%) Query: 13 ITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSP 72 + ++++ + + RS ++ VD G CN CE+EI A P++D ERFGI +V+SP Sbjct: 130 EKTEALGRELQNRIHSLLGRSLHIREVDAGSCNGCEVEINALSGPIYDLERFGIHLVASP 189 Query: 73 RHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIV 132 RHAD+LL TG VTR M + + Y++ P+ ++ V+ GACG GG+F Y+ G D+++ Sbjct: 190 RHADMLLVTGPVTRNMELALRKTYDATPEPRLVVAVGACGCSGGMFGRNYATCGSVDSVL 249 Query: 133 PIDVWIPGCPPTPAATIHGFAVALGLLQQK 162 P+DV+IPGCPP P A +HG +A+G L+++ Sbjct: 250 PVDVYIPGCPPNPFALLHGILLAVGRLEKR 279 >UniRef50_B1W4V9 NADH-quinone oxidoreductase subunit B 2 n=27 Tax=Bacteria RepID=NUOB2_STRGG Length = 235 Score = 205 bits (521), Expect = 1e-51, Method: Composition-based stats. Identities = 59/174 (33%), Positives = 78/174 (44%), Gaps = 10/174 (5%) Query: 2 SPVLTQHVSQPITLDE------QTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAI 55 SP V P + MK L R S +V+ G C IE AA Sbjct: 16 SPPPADPVLLPEPKRLGVLSRLAPEPMKVVLNWGRRYSLWVFNF---GLACCAIEFIAAS 72 Query: 56 TPVFDAERFG-IKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVG 114 D R G I PR AD+++ +G VT M R YE P+ K +S+GAC Sbjct: 73 MARHDFIRLGVIPFAPGPRQADLMIVSGTVTDKMAPAVKRLYEQMPEPKYVISFGACSNC 132 Query: 115 GGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDY 168 GG + D YSV G D I+P+DV++PGCPP P A + G + ++ A Y Sbjct: 133 GGPYWDSYSVTKGVDQIIPVDVYVPGCPPRPEALLQGILKLQEKIARESLAERY 186 >UniRef50_Q3A825 NADH-quinone oxidoreductase subunit B/C/D n=103 Tax=cellular organisms RepID=NUBCD_PELCD Length = 794 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 52/197 (26%), Positives = 89/197 (45%), Gaps = 7/197 (3%) Query: 9 VSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKV 68 +S+ I + + + + S + G + C +E+ ++TP FD RFG +V Sbjct: 1 MSESIPKNIILTTLDDAINWGRKNSMWPMFF---GLSCCFVEMMGSMTPRFDLARFGAEV 57 Query: 69 -VSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGG 127 +PR AD+++ G + M LR YE + K ++ G+C GG++ D+YSV G Sbjct: 58 LRGTPREADLMVIAGTPFKKMAASMLRVYEEMANPKWVIAMGSCANSGGMY-DVYSVMQG 116 Query: 128 SDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQ 187 + ++P+DV+IPGCPP P A + G + +K R + +P Sbjct: 117 VNQVLPVDVYIPGCPPRPEAFMQGLMTLQEKIARKESP--ARPVLNLRGGNEGTTVPILI 174 Query: 188 RIAIEREARRLAGYRQG 204 + + R GY Sbjct: 175 DGSSKTRDTRGPGYGHC 191 >UniRef50_B8J1E3 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J1E3_DESDA Length = 185 Score = 204 bits (519), Expect = 2e-51, Method: Composition-based stats. Identities = 60/161 (37%), Positives = 91/161 (56%) Query: 22 MKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFT 81 + + + + +S ++ DCG CN C+IE+ A +TP++D ERFG+ +P+HAD+LL T Sbjct: 4 VDKMIKRSRLKSPWIVHFDCGSCNGCDIEVLACLTPMYDVERFGVVNAGNPKHADVLLVT 63 Query: 82 GAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGC 141 G V R + YE P K +S GAC + GG+F D Y+V G+ ++P+DV++PGC Sbjct: 64 GTVNHRNRHVLKQIYEQMPSPKAVISLGACNLSGGVFKDTYNVLNGAHNVIPVDVFVPGC 123 Query: 142 PPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQ 182 PP P A I G ALG+L+ K+ T + Sbjct: 124 PPKPEAIIDGVVEALGVLKAKMGMGPVPQATFMPGDEDGTP 164 >UniRef50_C5GDP9 NADH-ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=Ajellomyces dermatitidis RepID=C5GDP9_AJEDR Length = 245 Score = 204 bits (518), Expect = 3e-51, Method: Composition-based stats. Identities = 53/172 (30%), Positives = 80/172 (46%), Gaps = 10/172 (5%) Query: 3 PVLTQHVSQPITLDEQTQKMKRHL-------LQDIRRSAYVYRVDCGGCNACEIEIFAAI 55 + + S + DE+T M L + S + + G C +E+ A Sbjct: 72 ARMERSSSLLPSQDEKTGTMGHFLGSIDAVANWGRQASLWPISL---GLACCGLEMMAVS 128 Query: 56 TPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGG 115 P +D +R G +SPR +D+L+ G VT M Y+ PD K +S G+C GG Sbjct: 129 MPRYDQDRLGTIFRASPRQSDLLIVAGTVTNKMAPALRLVYDQMPDPKWVISMGSCANGG 188 Query: 116 GIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVD 167 G +H YSV G D ++P+DV++PGCPPT A ++ +V L K Sbjct: 189 GYYHYSYSVVRGVDRLLPVDVYLPGCPPTAEALMYAISVVRRKLIVKSRTTR 240 >UniRef50_D2R5G9 NADH-quinone oxidoreductase, B subunit n=2 Tax=Planctomycetaceae RepID=D2R5G9_9PLAN Length = 192 Score = 204 bits (518), Expect = 3e-51, Method: Composition-based stats. Identities = 43/180 (23%), Positives = 74/180 (41%), Gaps = 7/180 (3%) Query: 9 VSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIK- 67 ++ + + K+ + S + C IE+ A D RFG + Sbjct: 1 MAIDLPENVMVTKLDELANWCRKNSLWPMPFAT---ACCGIELMATGASRHDLARFGAEV 57 Query: 68 VVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGG 127 SPR D+++ G V M R ++ + K C+S GAC GG+F D Y+V G Sbjct: 58 FRFSPRQCDLMIVAGRVVMKMLPVLQRIWQQMHEPKWCISMGACASTGGVF-DTYAVVQG 116 Query: 128 SDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQK--IHAVDYRDPTGVTMQPLWPQIPP 185 D +P+D+++PGCPP P +Q++ I ++ + ++P Sbjct: 117 IDRFIPVDMYVPGCPPRPEQLTQAIIDLQDKIQREGTITGEEFETAARQERKRALQELPI 176 >UniRef50_Q3ZXS0 NADH-quinone oxidoreductase subunit B n=5 Tax=Dehalococcoides RepID=NUOB_DEHSC Length = 200 Score = 203 bits (517), Expect = 3e-51, Method: Composition-based stats. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 4/152 (2%) Query: 11 QPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGI-KVV 69 + +++ L S + G C IE+ +D RFG+ Sbjct: 46 EEPPPGVFITSVEKVLNWSRHYSLWPVMF---GLACCAIEMMCMAASRWDLARFGMDIFR 102 Query: 70 SSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSD 129 +SPR AD+++ G +T M R Y+ P+ K ++ GACG GG+F D YSV G + Sbjct: 103 ASPRQADLMIVAGTLTWKMAPWLKRIYDQMPEPKWVLAMGACGTSGGLFRDSYSVVPGFN 162 Query: 130 TIVPIDVWIPGCPPTPAATIHGFAVALGLLQQ 161 +VP+DV++PGCPP P A + + + Sbjct: 163 LVVPVDVYVPGCPPRPEALMRAIMDIHEKIDK 194 >UniRef50_Q8DKZ4 NAD(P)H-quinone oxidoreductase subunit K n=21 Tax=cellular organisms RepID=NDHK_THEEB Length = 237 Score = 203 bits (517), Expect = 4e-51, Method: Composition-based stats. Identities = 50/167 (29%), Positives = 77/167 (46%), Gaps = 9/167 (5%) Query: 2 SPVLTQHVSQPITLDEQ-----TQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAIT 56 SP + +++P E + S + G C IE A I Sbjct: 6 SPAILNPIARPEVPQELAENIILTSLNDVYDWARLSSLWPLMY---GTACCFIEFAAMIG 62 Query: 57 PVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGG 116 FD +RFG+ +SPR AD+++ +G +T M +R YE P K ++ GAC + GG Sbjct: 63 SRFDFDRFGLVPRNSPRQADLIITSGTITMKMAPALVRLYEQMPSPKYVIAMGACTITGG 122 Query: 117 IF-HDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQK 162 +F D YS G D ++P+DV++PGCPP P A + + + Sbjct: 123 MFSSDSYSAVRGVDKLIPVDVYLPGCPPRPEAIMDAIVKLRKKIANE 169 >UniRef50_A8M069 NADH-quinone oxidoreductase subunit B 1 n=6 Tax=Actinomycetales RepID=NUOB1_SALAI Length = 188 Score = 203 bits (516), Expect = 5e-51, Method: Composition-based stats. Identities = 53/184 (28%), Positives = 80/184 (43%), Gaps = 7/184 (3%) Query: 15 LDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVS-SPR 73 + ++ L R S +V+ G C IE A D R G+ + PR Sbjct: 4 PAVLGEPIRFVLNWGRRYSLWVFNF---GLACCAIEFIATSMSRHDFMRLGVIPFAHGPR 60 Query: 74 HADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVP 133 AD+++ +G VT M R Y+ P+ K +S+GAC GG + D YSV G D ++P Sbjct: 61 QADLMVVSGTVTDKMAPAIKRLYDQMPEPKYVISFGACSNCGGPYWDSYSVTKGVDQLIP 120 Query: 134 IDVWIPGCPPTPAATIHGFAVALGLLQQK---IHAVDYRDPTGVTMQPLWPQIPPSQRIA 190 +DV++PGCPP P A +HG + + + V D P+ S Sbjct: 121 VDVYVPGCPPRPEALLHGILRLQEKIAAEGAGVGGVSRPDALASPTGGAAPRSADSLTAP 180 Query: 191 IERE 194 + R Sbjct: 181 LVRP 184 >UniRef50_A1RWL1 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWL1_THEPD Length = 245 Score = 203 bits (516), Expect = 5e-51, Method: Composition-based stats. Identities = 90/233 (38%), Positives = 123/233 (52%), Gaps = 17/233 (7%) Query: 23 KRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTG 82 K+ ++RS Y+ RVD G CN C+IE+F A+TP FD ER G+K+V SPR AD++L TG Sbjct: 6 KQKAYDALKRSVYLLRVDSGSCNGCDIEVFDALTPYFDVERLGVKLVLSPRMADVILVTG 65 Query: 83 AVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCP 142 VTR YE+AP + V+ GAC GGGI++D Y GG D ++P+DV+IPGCP Sbjct: 66 PVTRQFLPVLKATYEAAPKPCVVVACGACACGGGIWYDTYGTAGGVDKVIPVDVYIPGCP 125 Query: 143 PTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQR--------IAIERE 194 P P A +HG AVAL +L+QK+ R T + P +P + A++ E Sbjct: 126 PRPHAILHGVAVALDILEQKVK----RSETKADAESFKPALPSLEGAINSWELYRALKLE 181 Query: 195 ARRLAGYRQGREICDRLLRHLS-----DDPTGNRVNTWLRDADDPRLNSIVQQ 242 + GYR G + LLR DD D R+ V+ Sbjct: 182 LYKHLGYRIGYRVLCDLLRISKGSKDLDDFAAKAEKAVSEKYHDARITEAVRL 234 >UniRef50_A9KS72 NADH ubiquinone oxidoreductase 20 kDa subunit n=3 Tax=cellular organisms RepID=A9KS72_CLOPH Length = 144 Score = 202 bits (513), Expect = 1e-50, Method: Composition-based stats. Identities = 55/144 (38%), Positives = 85/144 (59%) Query: 27 LQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTR 86 ++ +++S ++ D CN C+IE+ A +TP++D ERFGI +P+HADILL TG+V Sbjct: 1 MKFVKKSPWIIHYDGSSCNGCDIEVLACLTPLYDVERFGIINTGNPKHADILLITGSVNE 60 Query: 87 AMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPA 146 + YE + KI V+ G C GGIF + Y+V GG D ++P+DV++PGC P Sbjct: 61 QNIPVVKQIYEQMAEPKIVVAVGICANSGGIFAECYNVSGGVDKVLPVDVYVPGCAARPE 120 Query: 147 ATIHGFAVALGLLQQKIHAVDYRD 170 A I G L +L++K ++ Sbjct: 121 AIIDGVVKGLAILEEKQKYARKKN 144 >UniRef50_B6GAA3 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GAA3_9ACTN Length = 228 Score = 202 bits (513), Expect = 1e-50, Method: Composition-based stats. Identities = 54/166 (32%), Positives = 83/166 (50%), Gaps = 1/166 (0%) Query: 32 RSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMP 91 +S ++ D CN C+IE+ ++ P++D ERFGI +P+HADI L TG+V Sbjct: 6 KSPWLIHYDGSSCNGCDIEVLDSMMPLYDIERFGIINTGNPKHADIFLVTGSVNAQNIEV 65 Query: 92 ALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHG 151 Y+ + K+ V+ G C GG+F D Y+V GG D +P+DV+ PGC P I Sbjct: 66 VRHIYDQMLEPKVVVACGICACTGGVFRDCYNVIGGVDKAIPVDVYAPGCAVRPETIIDA 125 Query: 152 FAVALGLLQQKIHAVDY-RDPTGVTMQPLWPQIPPSQRIAIEREAR 196 A+ +L +K + +DP + L P+ + E R Sbjct: 126 VLKAVEILDEKAKLMAAGKDPATAPRKGLLPRKGCAASCGAEETGR 171 >UniRef50_C0QR84 NADH-quinone oxidoreductase chain b (Nadh dehydrogenasei, chain b) (Ndh-1, chain b) n=1 Tax=Persephonella marina EX-H1 RepID=C0QR84_PERMH Length = 181 Score = 201 bits (511), Expect = 2e-50, Method: Composition-based stats. Identities = 48/176 (27%), Positives = 74/176 (42%), Gaps = 4/176 (2%) Query: 16 DEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHA 75 ++ L R S + V G C IE+ FD +R GI SPR + Sbjct: 8 GIILTTVEEVLSWGRRNSLWPASV---GLACCAIEMMHTAASRFDTDRLGIIFRGSPRQS 64 Query: 76 DILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPID 135 D+L+ G V + Y+ PD K ++ G C GG F Y+ G D I+P+D Sbjct: 65 DVLIVAGTVVNKVAPMLKLIYDQMPDPKWVIAMGGCSSAGGPFP-TYATLQGVDRIIPVD 123 Query: 136 VWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQRIAI 191 V++PGCPPTP A + G ++ K + + + IP ++ + Sbjct: 124 VYVPGCPPTPQALLWGILELQKKIKAKKEGKVWEEIPVREVPTASQPIPIKEKSPL 179 >UniRef50_Q492H7 NADH-quinone oxidoreductase subunit B n=225 Tax=Bacteria RepID=NUOB_BLOPB Length = 236 Score = 201 bits (511), Expect = 2e-50, Method: Composition-based stats. Identities = 47/169 (27%), Positives = 84/169 (49%), Gaps = 5/169 (2%) Query: 1 MSPVLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFD 60 ++ L +++ + + + + + + + S + Y G + C +E+ A T + D Sbjct: 26 VTDPLEKNIQRNVFFGKLSAFLHKIVNWGRGNSLWPYNF---GLSCCYVEMTTAFTAIHD 82 Query: 61 AERFGIKV-VSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFH 119 RFG +V +SPR AD ++ G M R Y+ + K +S GAC GG++ Sbjct: 83 VARFGSEVLRASPRQADFMVIAGTPFLKMVPVIQRLYDQMLEPKWVISMGACANSGGMY- 141 Query: 120 DLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDY 168 D+YSV G D +P+D++IPGCPP P A I G + + ++ + + Sbjct: 142 DIYSVVQGVDKFLPVDLYIPGCPPRPEAYIQGLLLLKKSINEERRPLSW 190 >UniRef50_C1ZCK3 NADH dehydrogenase subunit B n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZCK3_PLALI Length = 225 Score = 201 bits (510), Expect = 2e-50, Method: Composition-based stats. Identities = 48/173 (27%), Positives = 79/173 (45%), Gaps = 5/173 (2%) Query: 16 DEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGI-KVVSSPRH 74 + +++ + S + G C +E+ A +D +RFG ++PR Sbjct: 35 NLIVTTLEQAMNWGQLSSVWPLTF---GIACCAMEMMATGMSKYDLDRFGSGAFRATPRQ 91 Query: 75 ADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGI-FHDLYSVWGGSDTIVP 133 AD+++ G VT M R Y+ PD K ++ GAC +GGG F Y V G D +VP Sbjct: 92 ADLMIVAGTVTYKMASRIRRLYDQMPDPKYVIAMGACTIGGGPYFKYGYHVVKGVDLVVP 151 Query: 134 IDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPS 186 +DV+IPGCPP P A + G ++ + + V + + ++ P Sbjct: 152 VDVYIPGCPPRPEALLEGVMRIQDKIRARKLGRNTVSQLPVPHRSGYGKLAPV 204 >UniRef50_Q1IPE7 NADH-quinone oxidoreductase subunit B 1 n=10 Tax=Bacteria RepID=NUOB1_ACIBL Length = 213 Score = 201 bits (510), Expect = 2e-50, Method: Composition-based stats. Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 7/158 (4%) Query: 19 TQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIK-VVSSPRHADI 77 + + + S + G C IE+ + FD RFG + SPR +D+ Sbjct: 58 LTTLDNAVNWIRKNSIWPMTF---GLACCAIEMMSMGASRFDIARFGAEVFRPSPRQSDL 114 Query: 78 LLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVW 137 ++ G V++ M Y P+ K +S GAC GG+F + Y++ G + +P+D++ Sbjct: 115 MIIAGRVSQKMAPVIRHLYLQMPEPKWVISMGACATSGGVF-NNYALVQGVNQYIPVDIY 173 Query: 138 IPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVT 175 +PGCPP P I+ + +Q + +R + Sbjct: 174 VPGCPPRPEQLIYAITLLQEKIQAE--RGSFRRALNLE 209 >UniRef50_B2A054 NADH ubiquinone oxidoreductase 20 kDa subunit n=54 Tax=cellular organisms RepID=B2A054_OPITP Length = 338 Score = 200 bits (509), Expect = 3e-50, Method: Composition-based stats. Identities = 55/141 (39%), Positives = 82/141 (58%) Query: 27 LQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTR 86 + +R+S ++ D CN C+IE A +TP++D ER G+ +P+HADI L TGAV Sbjct: 1 MLGLRKSPWIIHYDASSCNGCDIETLACLTPLYDVERLGVINTGNPKHADIFLVTGAVNE 60 Query: 87 AMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPA 146 + Y P+ K+ V+ G C GGIF D Y++ GG D ++P+DV++PGC P Sbjct: 61 QSKEVIRNIYHQLPEPKVVVAIGVCASSGGIFRDCYNIAGGVDRVIPVDVYVPGCAARPE 120 Query: 147 ATIHGFAVALGLLQQKIHAVD 167 A I G ALG+L++K + Sbjct: 121 AIIDGVVQALGVLERKQSEMS 141 >UniRef50_C9RJJ6 NADH-quinone oxidoreductase, B subunit n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJJ6_FIBSS Length = 211 Score = 200 bits (509), Expect = 3e-50, Method: Composition-based stats. Identities = 48/211 (22%), Positives = 86/211 (40%), Gaps = 16/211 (7%) Query: 11 QPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKV-V 69 + + T + + S + + G C IE + +D R G + Sbjct: 4 EAEKPNIITSSLDFLVNWGRSNSLWPFPY---GTACCAIEFMSTEVGRYDLSRIGSEYVR 60 Query: 70 SSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSD 129 +PR +D+LL G +T R YE + + ++ GAC GG F+D Y G D Sbjct: 61 FTPRQSDVLLVAGTITYKQAPILKRIYEQMAEPRWVIAMGACASSGG-FYDCYCTVPGID 119 Query: 130 TIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQRI 189 I+P+DV+I GCPP P A + LQ+K+ + +++ ++ + Sbjct: 120 HIIPVDVYIGGCPPRPEAFFDA----MFDLQKKVKDESFMKQRAESVKEQL-EMIKVKTA 174 Query: 190 AIEREARRLAGYRQGREICD--RLLRHLSDD 218 +REA A ++ D ++ ++ Sbjct: 175 EAKREAAACA----REKVVDIKDFMKEKQEN 201 >UniRef50_B6YR59 NADH-quinone oxidoreductase subunit B n=5 Tax=Bacteroidales RepID=NUOB_AZOPC Length = 191 Score = 199 bits (507), Expect = 5e-50, Method: Composition-based stats. Identities = 42/146 (28%), Positives = 65/146 (44%), Gaps = 4/146 (2%) Query: 16 DEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKV-VSSPRH 74 + K+ + S + + C IE +D RFG +V +SPR Sbjct: 25 NIAIAKLNDLINWGRSNSVWPLTFAT---SCCGIEFMCLGAARYDFARFGWEVTRNSPRQ 81 Query: 75 ADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPI 134 AD++ G + M R Y+ + K ++ G+C + GG F Y G D I+P+ Sbjct: 82 ADVVFCCGTIVHKMAPVLKRLYDQMSEPKYVIALGSCAISGGPFKSSYHTIMGIDKIIPV 141 Query: 135 DVWIPGCPPTPAATIHGFAVALGLLQ 160 DV+IPGCPP P A I+G ++ Sbjct: 142 DVYIPGCPPRPDAMIYGMIQLARKIK 167 >UniRef50_A5TDF9 NADH-quinone oxidoreductase, B subunit n=2 Tax=pseudomallei group RepID=A5TDF9_BURMA Length = 293 Score = 199 bits (507), Expect = 6e-50, Method: Composition-based stats. Identities = 47/157 (29%), Positives = 78/157 (49%), Gaps = 6/157 (3%) Query: 9 VSQPITLDE---QTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFG 65 + P+TL++ + + + S + G C +E+ A +D +RFG Sbjct: 128 ANHPLTLEKDGFIVTTLDAAMAAAQKNSLWYMTF---GLACCAVEMMHAAGARYDMDRFG 184 Query: 66 IKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVW 125 + +SPR D+++ G +T M R Y+ + + VS G+C GGG +H YSV Sbjct: 185 MIPRASPRQCDLMIVAGTLTNKMAPAMRRVYDQMAEPRYVVSMGSCANGGGYYHYSYSVV 244 Query: 126 GGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQK 162 G D IVP+DV++PGCPPT A ++G + ++ Sbjct: 245 RGCDRIVPVDVYVPGCPPTAEALVYGLMQLQRKVAER 281 >UniRef50_C1A8Z3 NADH-quinone oxidoreductase chain B n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8Z3_GEMAT Length = 212 Score = 199 bits (506), Expect = 7e-50, Method: Composition-based stats. Identities = 57/177 (32%), Positives = 80/177 (45%), Gaps = 5/177 (2%) Query: 19 TQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVS-SPRHADI 77 T ++ + S + G C IE A FD RFG++ +S SPR AD+ Sbjct: 28 TTRLDFLVNWGRAGSLWPMPF---GTACCAIEFMATAASRFDLSRFGMERLSYSPRQADV 84 Query: 78 LLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVW 137 LL G V + R Y+ P K +S GAC GG+F D Y+V G DTI+P+DV+ Sbjct: 85 LLCAGRVPLKLAPVLRRIYQQMPQPKWVISMGACASTGGMF-DNYAVVQGIDTIIPVDVY 143 Query: 138 IPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIERE 194 +PGCPP P A +H + + Q+ R IPPS+ + Sbjct: 144 VPGCPPRPEALMHAIIMLQKKVMQERLKDSTRHVEIDPDPTSQLYIPPSRIDELSEP 200 >UniRef50_C6PUG1 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PUG1_9CLOT Length = 242 Score = 198 bits (504), Expect = 1e-49, Method: Composition-based stats. Identities = 52/150 (34%), Positives = 86/150 (57%) Query: 13 ITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSP 72 +++ Q++K + +RS + VD G CN C +E+ +D R+GIK +SP Sbjct: 93 ASIEILGQEVKEKIYSKFKRSLVLRSVDTGSCNGCMMEVSNTQNTYYDLSRYGIKFAASP 152 Query: 73 RHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIV 132 RHAD ++ TG VT M+ ++ Y++ D KI ++ G+C GGIF D YSV + I+ Sbjct: 153 RHADGIVVTGPVTLNMKEALIKTYDAISDPKIVIAVGSCAYSGGIFKDGYSVCEDLNEIL 212 Query: 133 PIDVWIPGCPPTPAATIHGFAVALGLLQQK 162 +++ IPGCPP+P A ++G + L ++ Sbjct: 213 KVNLVIPGCPPSPQAILYGMLKIINKLDEE 242 >UniRef50_Q1IZX2 NADH-quinone oxidoreductase subunit B n=16 Tax=cellular organisms RepID=NUOB_DEIGD Length = 178 Score = 197 bits (502), Expect = 2e-49, Method: Composition-based stats. Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 5/168 (2%) Query: 10 SQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIK-V 68 + + +++ + S + G C IE+ ++ D RFG + Sbjct: 12 QELESEGVLFSTLEKLVAWGRSNSLWPATF---GLACCAIEMMSSTDGRNDLSRFGSEVF 68 Query: 69 VSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGS 128 +SPR AD+++ G +++ M R Y+ PD K +S GAC GG+F + Y+V Sbjct: 69 RASPRQADVMIVAGRLSKKMAPIMRRVYDQMPDPKWVISMGACASSGGMF-NNYAVVQNV 127 Query: 129 DTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTM 176 D +VP+DV++PGCPP P A I+ ++ + + V Sbjct: 128 DHVVPVDVFVPGCPPRPEALIYAVMQLQKKVRGEAYDARGEQLPMVEA 175 >UniRef50_C8W241 Hydrogenase, small subunit-like protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W241_DESAS Length = 236 Score = 197 bits (502), Expect = 2e-49, Method: Composition-based stats. Identities = 60/151 (39%), Positives = 95/151 (62%) Query: 9 VSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKV 68 ++ P + ++ + ++ + + RS ++ VD G CN C+ EI + PV+D +++G+ Sbjct: 86 LTAPASAEDLGRALREKIKKICHRSLHIRYVDAGACNGCDFEINSMTNPVYDIQQYGVDF 145 Query: 69 VSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGS 128 V+SPRHAD+LL TG VTR + + + YE+ P + V+ GAC GGG+F + Y+ GG Sbjct: 146 VASPRHADMLLVTGVVTRNLEIALHKTYEACPRPALVVAVGACACGGGVFKEAYASGGGV 205 Query: 129 DTIVPIDVWIPGCPPTPAATIHGFAVALGLL 159 D +P+DV++PGCPPTPA I G A+G L Sbjct: 206 DKFLPVDVYVPGCPPTPAQIIKGILTAIGRL 236 >UniRef50_Q1IL91 NADH-quinone oxidoreductase subunit B 2 n=4 Tax=Bacteria RepID=NUOB2_ACIBL Length = 202 Score = 197 bits (500), Expect = 3e-49, Method: Composition-based stats. Identities = 49/187 (26%), Positives = 74/187 (39%), Gaps = 9/187 (4%) Query: 18 QTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIK-VVSSPRHAD 76 + + S + G C IE+ A T +D RFG + SPR +D Sbjct: 13 LLSSVDYVFNWARKSSVWPMTF---GLACCAIEMITASTARYDIARFGSEVFRPSPRQSD 69 Query: 77 ILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDV 136 +++ G VT M R YE P+ K ++ GAC GG F + Y+ G D IVP+DV Sbjct: 70 LMIVAGTVTLKMAPVVQRIYEQMPEPKWVMAMGACASVGGPF-NTYATLQGVDKIVPVDV 128 Query: 137 WIPGCPPTPAATIHGFAVALGLLQ----QKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIE 192 ++ GCPP P +G + K D T + +I + + Sbjct: 129 YVVGCPPRPENLFYGLLKLQDKIDHMTLAKRPTDVRLDETMLDEFRKSVRIAQAGSTVVI 188 Query: 193 REARRLA 199 + A Sbjct: 189 QPAAPPV 195 >UniRef50_A9G9S9 NADH-quinone oxidoreductase subunit B 2 n=2 Tax=Myxococcales RepID=NUOB2_SORC5 Length = 182 Score = 197 bits (500), Expect = 3e-49, Method: Composition-based stats. Identities = 46/155 (29%), Positives = 71/155 (45%), Gaps = 3/155 (1%) Query: 16 DEQTQKMKRHLLQ--DIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPR 73 T + + + + RS V+ + G C IE+ P D ERFG SPR Sbjct: 24 GVITTSVDQTVNWLLNWGRSNSVWYM-LFGLACCAIELMQTGGPRGDLERFGAAPRPSPR 82 Query: 74 HADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVP 133 +D+ + G +T M R Y+ + + +S G+C GG+F YSV G D I+P Sbjct: 83 SSDLFIIAGTLTYKMATRVKRLYDQMSEPRFVISMGSCSNCGGLFQYAYSVCKGVDQIIP 142 Query: 134 IDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDY 168 +DV++PGCPP P A + G ++ + Sbjct: 143 VDVYVPGCPPRPEALLEGLLKIQEKIKSERALGRR 177 >UniRef50_A6UVJ5 NADH ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=cellular organisms RepID=A6UVJ5_META3 Length = 246 Score = 197 bits (500), Expect = 4e-49, Method: Composition-based stats. Identities = 59/144 (40%), Positives = 85/144 (59%) Query: 14 TLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPR 73 TL E + + + +S Y+ V GGCNAC+ +I TPV+D RFGIK V+SPR Sbjct: 103 TLKEPDTSSLKSIKKLFGKSVYLREVCAGGCNACDADINVLNTPVYDLSRFGIKFVASPR 162 Query: 74 HADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVP 133 HAD L+ TG VT+ M + ++ Y++ P K ++ G C + GGIF + V GG D I+P Sbjct: 163 HADGLVITGPVTKNMELALMKTYDATPSPKFVIAVGTCAISGGIFRENEEVVGGVDKILP 222 Query: 134 IDVWIPGCPPTPAATIHGFAVALG 157 +D++IPGCPP P ++ F Sbjct: 223 VDLYIPGCPPHPFTNLYAFVKFFK 246 >UniRef50_D2RET0 NADH-quinone oxidoreductase, B subunit n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RET0_ARCPR Length = 709 Score = 196 bits (498), Expect = 6e-49, Method: Composition-based stats. Identities = 54/222 (24%), Positives = 90/222 (40%), Gaps = 15/222 (6%) Query: 28 QDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRA 87 + S + + C +E+ A +DAER G R ++++ GA+TR Sbjct: 5 WGTKWSLWPVHLVT---ACCGVELAHAYACGYDAERIGSLNYGICRQTNLIIVEGAITRK 61 Query: 88 MRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAA 147 M +E P+ K + GACG+ GG+F + Y + D + GCPPTP A Sbjct: 62 MARVLRITWEQMPNPKFVIVMGACGIKGGLFKNSYHMVRPWDVVPVDVFVP-GCPPTPEA 120 Query: 148 TIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIEREARRLAGYRQGREI 207 I G ++ K + + + + ++PP + +E A + +GR+ Sbjct: 121 LIRGIVALQKKIEGKEDFDKFEEVSIEVEKGKVRKLPPLKEFRVENPA-VVPNVERGRDD 179 Query: 208 CDRLLRHLSDDPTGNRVNTWLRD------ADDPRLNSIVQQL 243 + L +D G RV T +D D R I+ L Sbjct: 180 YAKTL----EDVLGVRVYTVGKDHYYAFVDDVKRSAEILAHL 217 >UniRef50_B1ZUJ0 NADH-quinone oxidoreductase subunit B 2 n=13 Tax=Bacteria RepID=NUOB2_OPITP Length = 191 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 47/164 (28%), Positives = 70/164 (42%), Gaps = 6/164 (3%) Query: 4 VLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAER 63 T + ++ + K+ L S + G C IE+ AA FD R Sbjct: 23 PSTPEIPPEVSQIARFAKLDDLLALGRANSLWPLTF---GLACCAIEMMAAGMARFDISR 79 Query: 64 FGIK-VVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDL- 121 FG + SPR AD+++ G V + M Y+ + K ++ G C + GG F Sbjct: 80 FGAEVFRPSPRQADVMIVAGTVNKKMAPAVKLLYDQMLEPKWVIAMGQCAISGGPFKYPG 139 Query: 122 -YSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIH 164 Y+V G D + P+DV++PGCPP P A I G + K Sbjct: 140 QYAVVEGVDQLFPVDVYVPGCPPRPEALIEGILKLEEKITGKRR 183 >UniRef50_B8HLE8 NAD(P)H-quinone oxidoreductase subunit K 2 n=94 Tax=cellular organisms RepID=NDHK2_CYAP4 Length = 259 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 54/177 (30%), Positives = 81/177 (45%), Gaps = 13/177 (7%) Query: 1 MSPVLTQHVSQPITLDEQTQKMKRHL---------LQDIRRSAYVYRVDCGGCNACEIEI 51 MS L + PI+ E ++ ++ S Y G C IE Sbjct: 1 MSTPLDHSIRNPISSAEVPPELSENIILTSLDDIYNWARISSIYPLMY---GTACCFIEF 57 Query: 52 FAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGAC 111 A I FD ERFG+ +SPR AD+++ G +T M +P R Y+ P+ K ++ GAC Sbjct: 58 AAMIASRFDMERFGMFPRASPRQADLIILAGTLTMQMAVPTRRLYDQMPEPKYVIAMGAC 117 Query: 112 GVGGGIF-HDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVD 167 + GG+F D + G+D ++PIDV+IPGCPP P A + + + Sbjct: 118 MITGGMFSADSPTALRGADKLLPIDVYIPGCPPRPEAILDAVTKLRKKIANESPQER 174 >UniRef50_A9A345 NADH-quinone oxidoreductase, B subunit n=1 Tax=Nitrosopumilus maritimus SCM1 RepID=A9A345_NITMS Length = 174 Score = 194 bits (493), Expect = 3e-48, Method: Composition-based stats. Identities = 43/144 (29%), Positives = 74/144 (51%), Gaps = 4/144 (2%) Query: 19 TQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGI-KVVSSPRHADI 77 + + + S + ++ C +E AA +P +D ERFGI + S R D+ Sbjct: 27 DKPLGYAINWGRIWSLWPVHIET---ACCSVEFGAASSPRYDVERFGIIEAFGSLRQCDL 83 Query: 78 LLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVW 137 ++ G +TR M Y+ P+ K ++ GAC + GG++ D Y+V G D ++P+DV+ Sbjct: 84 VVVQGTITRKMAPRLRLVYDQMPEPKYVIAMGACAITGGLYFDSYNVLPGIDGVIPVDVY 143 Query: 138 IPGCPPTPAATIHGFAVALGLLQQ 161 +PGCPP P I G + +++ Sbjct: 144 VPGCPPRPETLIQGCILLQEKIKR 167 >UniRef50_A2BJ94 NAD(P)H-quinone oxidoreductase chain K n=10 Tax=Thermoprotei RepID=A2BJ94_HYPBU Length = 209 Score = 194 bits (492), Expect = 3e-48, Method: Composition-based stats. Identities = 53/196 (27%), Positives = 92/196 (46%), Gaps = 11/196 (5%) Query: 4 VLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAER 63 L + ++ + + + +K L I S + + + C E A P +D+ER Sbjct: 15 RLEEAAAKAMKWLLERKPIKSLLDWGISFSLWPVHLTT---SCCGAEFAAVYDPKYDSER 71 Query: 64 FGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYS 123 G + PR+ ++LL G +TR M A +E P K ++ GAC + GGIF++ Y+ Sbjct: 72 LGSLPFTHPRNTNVLLVEGTLTRKMARAARLVWEQMPWPKFVIAMGACAITGGIFYNSYN 131 Query: 124 VWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQI 183 + + I+P+D ++PGCPPTP A + LQ+K+ +++ + L + Sbjct: 132 IVR-VNQILPVDYYVPGCPPTPEAVANALI----KLQEKVRKGEWKPRDIEDKKFLEELM 186 Query: 184 PP---SQRIAIEREAR 196 P R +E AR Sbjct: 187 APHYEKARRHLELLAR 202 >UniRef50_Q39SF9 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39SF9_GEOMG Length = 244 Score = 194 bits (492), Expect = 3e-48, Method: Composition-based stats. Identities = 65/160 (40%), Positives = 85/160 (53%), Gaps = 9/160 (5%) Query: 1 MSPVLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFD 60 + P H ++P+ D L + RS V GGCNACE + T +D Sbjct: 93 VHPGSEHHHARPLPPD---------LRRLFGRSLKFREVSAGGCNACEADTNVLSTIGWD 143 Query: 61 AERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHD 120 RFGI+ V+SPRHAD L TG VT M L YE+ PD KI V+ GAC + GG + D Sbjct: 144 LGRFGIQFVASPRHADGLWVTGPVTEHMAKALLTTYEAIPDPKIVVACGACAINGGPYID 203 Query: 121 LYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQ 160 V G D+IVP+D++IPGCPP PA + G L ++ Sbjct: 204 TPQVCNGVDSIVPVDLYIPGCPPHPATILDGLLRILNKIK 243 >UniRef50_A1RZ48 NADH-quinone oxidoreductase, B subunit n=3 Tax=Thermoprotei RepID=A1RZ48_THEPD Length = 171 Score = 194 bits (492), Expect = 3e-48, Method: Composition-based stats. Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 4/158 (2%) Query: 4 VLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAER 63 L + + + ++ I S + + C E A P FDAER Sbjct: 12 RLEESARKAAQWLVEKTPIRSLRDWAITFSLWPVHFTT---SCCGAEFAATSAPRFDAER 68 Query: 64 FGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYS 123 FG +SPR ++++ G +T+ M A Y+ P K ++ GAC + GG+F++ Y+ Sbjct: 69 FGFLPFNSPRQTNLMVIEGTLTKKMGEAAKIVYDQMPWPKFVIAMGACAIDGGLFYNSYN 128 Query: 124 VWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQ 161 + D I+P++ +IPGCPP P A + +++ Sbjct: 129 IVRPKD-ILPVEYFIPGCPPRPEAVAQAIIMLQEKVRK 165 >UniRef50_B3TC56 Putative NADH ubiquinone oxidoreductase, 20 Kd subunit n=1 Tax=uncultured marine microorganism HF4000_APKG10H11 RepID=B3TC56_9ZZZZ Length = 182 Score = 193 bits (491), Expect = 3e-48, Method: Composition-based stats. Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 5/159 (3%) Query: 17 EQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHAD 76 ++ +K+ + + S +V + G C E A +D ERFG V+++ R D Sbjct: 29 KKVPLVKKLITWGRKNSLWVVHLTTG---CCSPEFAALAGAGYDMERFGPLVMAAMRQCD 85 Query: 77 ILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDV 136 IL+ G V M R Y+ PD K ++ G C + GG + D YS+ G D I+P+DV Sbjct: 86 ILIIEGQVADKMAEVVKRTYDQMPDPKYVIAVGNCAISGGFYWDSYSMVMGIDKIIPVDV 145 Query: 137 WIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVT 175 ++PGCPP P I + + ++ +D P V Sbjct: 146 YVPGCPPRPEDWIDAIRLVQTRMDKE--GLDRERPLLVE 182 >UniRef50_UPI00016C3AA7 NADH-quinone oxidoreductase, B subunit n=2 Tax=Bacteria RepID=UPI00016C3AA7 Length = 201 Score = 192 bits (489), Expect = 7e-48, Method: Composition-based stats. Identities = 44/167 (26%), Positives = 68/167 (40%), Gaps = 5/167 (2%) Query: 15 LDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIK-VVSSPR 73 D + + S + C IE+ A + +D RFG + + SPR Sbjct: 8 PDFMIAPLDYLANMARKHSLWPMPFAT---ACCGIELMATASSRYDIARFGSEAMRFSPR 64 Query: 74 HADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVP 133 D+++ G V M R + P+ K C+S GAC GG+F D Y+V G D +P Sbjct: 65 QCDVMIVAGRVAMKMVPVMQRIWLQMPEPKWCISMGACASSGGVF-DTYAVVQGIDRFIP 123 Query: 134 IDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLW 180 +DV++PGCPP P I +Q+ + + Sbjct: 124 VDVYVPGCPPRPEQLIRAVLDLQEKIQKTGTIDAREFASRTAYEGPT 170 >UniRef50_Q1D8S3 NADH-quinone oxidoreductase subunit B n=2 Tax=Cystobacterineae RepID=NUOB_MYXXD Length = 187 Score = 192 bits (488), Expect = 8e-48, Method: Composition-based stats. Identities = 46/172 (26%), Positives = 74/172 (43%), Gaps = 5/172 (2%) Query: 8 HVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIK 67 + ++ + + L + S + Y C +E + D RFG + Sbjct: 11 TTRRDESMGWLQSIVSKGLGWARKYSLFTYPYAT---ACCGMEYMSVAASRHDISRFGAE 67 Query: 68 V-VSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWG 126 SPR AD+L+ G + R YE + K V++G C GG F+D Y+V Sbjct: 68 FPRFSPRQADLLMVVGTINLKQAPILKRVYEQMAEPKWVVAFGVCASSGG-FYDNYAVLQ 126 Query: 127 GSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQP 178 G D I+P+DV+IPGCPP P + G + + ++H + R+ T Sbjct: 127 GIDRIIPVDVYIPGCPPRPEQVLDGLMLLQDKIGNQVHRIAEREEANPTAAR 178 >UniRef50_B0SFT5 NADH-quinone oxidoreductase subunit B n=13 Tax=cellular organisms RepID=NUOB_LEPBA Length = 186 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 46/168 (27%), Positives = 70/168 (41%), Gaps = 5/168 (2%) Query: 18 QTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIK-VVSSPRHAD 76 Q + + S + Y C IE + +D RFG + SPR AD Sbjct: 19 QVATLDNVVQWGQSFSLWPYPFAT---ACCGIEYMSTACADYDIARFGAERPSFSPRQAD 75 Query: 77 ILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDV 136 ++L G +T M + Y+ + K +S GAC GG+FH Y V G D I+P+DV Sbjct: 76 MILVLGTITYKMAPVLRQIYDQLAEPKFVISVGACASSGGMFH-TYGVLQGVDRILPVDV 134 Query: 137 WIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIP 184 ++PGCPP P A + +Q + ++ + P Sbjct: 135 YVPGCPPRPEAILDALVKLQKKVQSQGLEARRQEVMRKIEEINERNKP 182 >UniRef50_Q64DY8 F420H2-quinone oxidoreductase 45 kD subunit n=8 Tax=Archaea RepID=Q64DY8_9ARCH Length = 788 Score = 191 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 48/195 (24%), Positives = 79/195 (40%), Gaps = 10/195 (5%) Query: 27 LQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTR 86 + S + + C +E+ +D ER G + R A+ ++ G +TR Sbjct: 23 RWATKWSLWPCHFLT---SCCGVELAHTGACGYDMERLGTLNMGISRQANFIMVEGTITR 79 Query: 87 AMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPA 146 M +E PD K G CG GGIF + Y++ SD IVP+D +IPGCP TP Sbjct: 80 KMARALRIVWEQMPDPKFVNVIGTCGQRGGIFWNSYNITRPSD-IVPVDFFIPGCPITPE 138 Query: 147 ATIHGFAVALGLLQQK----IHAVDYRDPTGVTMQPLWPQIPP--SQRIAIEREARRLAG 200 + + G ++ + I P+G + P P + + + R Sbjct: 139 SLLRGVRAVQEKIEGRDNTTIRFKHVELPSGDGEENRAPTTPKIFAPTPLVRVDVPRDVD 198 Query: 201 YRQGREICDRLLRHL 215 + G+++ L L Sbjct: 199 WAFGKDLVKNLKAQL 213 >UniRef50_A0RY66 NADH-ubiquinone oxidoreductase, subunit B n=3 Tax=Thaumarchaeota RepID=A0RY66_CENSY Length = 160 Score = 191 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 4/144 (2%) Query: 19 TQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGI-KVVSSPRHADI 77 + + + S + ++ C +E AA P +D ERFGI + S R D+ Sbjct: 13 DKPLGYAINWGRIWSLWPVHIET---ACCSVEFGAASGPKYDVERFGIIEAFGSLRQCDL 69 Query: 78 LLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVW 137 ++ G +TR M Y+ P+ K ++ GAC + GG++ D Y+V G D ++P+DV+ Sbjct: 70 IVVQGTITRKMAPRLRLVYDQMPEPKYVIAMGACAITGGLYFDSYNVLPGIDGVLPVDVY 129 Query: 138 IPGCPPTPAATIHGFAVALGLLQQ 161 +PGCPP P I G + +++ Sbjct: 130 VPGCPPRPETLIQGCMLLQEKIKR 153 >UniRef50_A0B811 F420H2 dehydrogenase subunit B n=6 Tax=Archaea RepID=A0B811_METTP Length = 190 Score = 191 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 3/148 (2%) Query: 21 KMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLF 80 +K L + S + G C +E+ P +D +RFGI ++PR AD+++ Sbjct: 46 PIKNVLNWGRKNSLWFLMQPMG---CCGVEMLVFGCPHYDCDRFGIIPRATPRQADVMII 102 Query: 81 TGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPG 140 +G +TR +E + K C++ G C + GG F+D Y++ + PIDV++PG Sbjct: 103 SGYITRKYLPAIKNLWEQMLEPKWCIAVGECAISGGPFYDSYNIIQNTSDFFPIDVYVPG 162 Query: 141 CPPTPAATIHGFAVALGLLQQKIHAVDY 168 CPP P I GF ++Q+ Y Sbjct: 163 CPPRPEQFIKGFVELQEKIKQRKDKRGY 190 >UniRef50_A3THJ2 NADH dehydrogenase beta subunit n=2 Tax=Bacteria RepID=A3THJ2_9MICO Length = 198 Score = 191 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 41/153 (26%), Positives = 74/153 (48%), Gaps = 5/153 (3%) Query: 9 VSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIK- 67 + + + ++ + S + G C IE+ A TP +D RFG++ Sbjct: 3 LEEKLPAGFVLTTLESVAGYMRKASIWPATF---GLACCAIEMMAVGTPDYDIARFGMER 59 Query: 68 VVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGG 127 ++PR AD+++ G V+ M + Y+ P+ K +S G C GG+F + Y++ G Sbjct: 60 FSATPRQADLMIVAGRVSNKMAPVVRQVYDQMPNPKWVISMGVCASSGGMF-NNYAIVQG 118 Query: 128 SDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQ 160 D I+P+D+++PGCPP P ++ +Q Sbjct: 119 VDHIIPVDIYLPGCPPRPEMLLNAIIELHDQIQ 151 >UniRef50_B1KJU9 NADH-quinone oxidoreductase subunit B n=8 Tax=Proteobacteria RepID=NUOB_SHEWM Length = 213 Score = 190 bits (483), Expect = 3e-47, Method: Composition-based stats. Identities = 48/196 (24%), Positives = 91/196 (46%), Gaps = 10/196 (5%) Query: 3 PVLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAE 62 P TQ + + + + +++ + S + + G + C +E+ + T D Sbjct: 12 PTSTQTMQEVVEKNLLVTRLEDLVAWGRSNSLWPFNF---GLSCCYVEMATSFTSRHDIA 68 Query: 63 RFGIKV-VSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDL 121 RFG +V ++PR AD+++ +G V M Y+ + K + G+C GG++ D+ Sbjct: 69 RFGSEVIRATPREADLIVISGTVFLKMAPVIKHLYDQMLEPKWVICMGSCANSGGMY-DV 127 Query: 122 YSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWP 181 YSV G+D +PID+++PGCPP P A ++G + Q+ I R + + P Sbjct: 128 YSVVQGADRFLPIDLYVPGCPPRPEALMYGLTLL----QEAIKDGAPRQARPLNR-TITP 182 Query: 182 QIPPSQRIAIEREARR 197 + + R+ + Sbjct: 183 EEIQAFACRNMRDEKH 198 >UniRef50_B1ZRT2 NADH-quinone oxidoreductase subunit B 1 n=4 Tax=Bacteria RepID=NUOB1_OPITP Length = 171 Score = 190 bits (483), Expect = 4e-47, Method: Composition-based stats. Identities = 43/164 (26%), Positives = 67/164 (40%), Gaps = 5/164 (3%) Query: 10 SQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIK-V 68 S I K + S + + G C IE+ FD RFG + + Sbjct: 11 SSAIEGGIVVSKADAVINWIRTNSMWPMPM---GLACCAIELMQVGNGRFDIARFGAEVM 67 Query: 69 VSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGS 128 SPR +D ++ G+VT M R Y+ K ++ GAC GG++ Y+ G Sbjct: 68 RFSPRQSDCMIVAGSVTYKMAPQIRRIYDQMMSPKWVIAMGACASSGGMYR-SYAHMQGV 126 Query: 129 DTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPT 172 D I+P+DV+I GCPP P + ++ + + T Sbjct: 127 DRILPVDVYISGCPPRPEGILDALMKLQAKIRTERAGQNLFKAT 170 >UniRef50_A7I7C9 NADH ubiquinone oxidoreductase, 20 kDa subunit n=9 Tax=cellular organisms RepID=A7I7C9_METB6 Length = 172 Score = 190 bits (482), Expect = 4e-47, Method: Composition-based stats. Identities = 59/168 (35%), Positives = 91/168 (54%), Gaps = 5/168 (2%) Query: 1 MSPVLTQHVSQPITL-----DEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAI 55 +S +L + V+ P+ + + ++++R + RS + +D G NA EIEI Sbjct: 5 VSCMLGKKVTGPLPVRDEELERIGREIRREINARFGRSLAIRELDAGSDNAAEIEINNLS 64 Query: 56 TPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGG 115 +D ERFGI V+SPRHAD+LL TGA+T M + A + Y++ P K V+ G G Sbjct: 65 NAYYDVERFGISFVASPRHADVLLVTGAITCNMAIAAQKTYDAMPSPKFVVAVGDDACDG 124 Query: 116 GIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKI 163 GI+ Y+V GG+D I P+D+ IPG PP P + G + ++ Sbjct: 125 GIYKGTYAVLGGADAIFPVDLKIPGNPPAPIQILTGLLALMRSAGKRT 172 >UniRef50_C7PSH0 NADH-quinone oxidoreductase, B subunit n=4 Tax=Sphingobacteriales RepID=C7PSH0_CHIPD Length = 187 Score = 190 bits (482), Expect = 4e-47, Method: Composition-based stats. Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 5/157 (3%) Query: 19 TQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIK-VVSSPRHADI 77 + + + S + + C IE A + +D RFG + + +PR D+ Sbjct: 27 ATTFDQVIGLARKNSIWPLPFAT---SCCGIEFMATMASTYDMSRFGSERMAFTPRQCDL 83 Query: 78 LLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVW 137 L+ G +++ M + Y + + V+ GAC GG+F D YSV G D ++P+DV+ Sbjct: 84 LMVMGTISKKMAPVLRQVYLQMAEPRWVVAVGACASSGGVF-DTYSVLQGIDQVIPVDVY 142 Query: 138 IPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGV 174 +PGCPP P A I GF L+ Q+ + D Sbjct: 143 VPGCPPRPEAIIDGFMRVQDLVGQESLRRRHSDKYKE 179 >UniRef50_B1L7S0 F420H2 dehydrogenase subunit n=3 Tax=Archaea RepID=B1L7S0_KORCO Length = 174 Score = 189 bits (481), Expect = 5e-47, Method: Composition-based stats. Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 4/157 (2%) Query: 5 LTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERF 64 L + + + ++ I S + C E A+ P +DAER Sbjct: 14 LERSARKAAAWLVNKRPIRDIRDWGIAFSLWPVHFTT---ACCGAEFAASAAPKYDAERL 70 Query: 65 GIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSV 124 G R ++L G +++ M A+ YE P+ K + GAC + GGIF + Y++ Sbjct: 71 GFLPFIGIRQCNVLFIEGTLSKKMAEAAIWVYEQMPEPKFVIGMGACAIDGGIFWNSYNI 130 Query: 125 WGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQ 161 D I+P++V+IPGCPP P A + +++ Sbjct: 131 VRPMD-ILPVNVFIPGCPPRPEAVAQAIIMLQRKIRK 166 >UniRef50_C9RKY2 NADH-quinone oxidoreductase, B subunit n=2 Tax=cellular organisms RepID=C9RKY2_FIBSS Length = 419 Score = 189 bits (481), Expect = 6e-47, Method: Composition-based stats. Identities = 50/195 (25%), Positives = 85/195 (43%), Gaps = 6/195 (3%) Query: 5 LTQHVSQPITLDEQTQ-KMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAER 63 L + PI + + + S + G + C IE+ ++ +D R Sbjct: 6 LAPKILDPIPGGKYVVNAIDYVVNWARANSIWPL---TYGTSCCAIEMMSSSMARYDIAR 62 Query: 64 FGIK-VVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIF-HDL 121 FG + SSPR AD+ + G +TR M +E P K ++ GAC + GG F +D Sbjct: 63 FGSEVFRSSPRQADLFILAGTITRRMAPAIQMLWEQIPGPKYVIAMGACTISGGPFIYDN 122 Query: 122 YSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWP 181 YSV G+ ++P+DV++PGCPP P A HG + ++ + + + + Sbjct: 123 YSVVRGAQNLIPVDVFVPGCPPRPEALFHGLLTLREKILKETCRNPWHEGEPKDVSTMDR 182 Query: 182 QIPPSQRIAIEREAR 196 ++ A E + Sbjct: 183 YREAAKTWAALEEMK 197 >UniRef50_A4J659 NADH-quinone oxidoreductase subunit B n=34 Tax=Firmicutes RepID=NUOB_DESRM Length = 196 Score = 189 bits (480), Expect = 7e-47, Method: Composition-based stats. Identities = 54/163 (33%), Positives = 81/163 (49%), Gaps = 10/163 (6%) Query: 4 VLTQHVSQPITLDEQTQ-----KMKRHLLQDIRRSAYVYRVDCGGCNACEIE-IFAAITP 57 L + ++P + E + +++ L S + G C IE + AA Sbjct: 25 RLKKLGAEPAVIGEVARTVSVGPLEKLLNLARANSLWPMGF---GLACCAIEGLMAANMA 81 Query: 58 VFDAERFGIK-VVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGG 116 FD RFG + + +SPR AD++L G VT+ +R YE + K ++ G+C + GG Sbjct: 82 RFDLARFGYEVMRASPRQADVMLVCGTVTKKAAPFVVRLYEQMAEPKYVIAMGSCAISGG 141 Query: 117 IFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLL 159 F D YSV G D ++P+DV+IPGC P P A IHGF + Sbjct: 142 PFVDSYSVVPGVDKLIPVDVYIPGCAPRPDAVIHGFMKLKEKI 184 >UniRef50_Q26783 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial n=7 Tax=Trypanosomatidae RepID=NDUS7_TRYBB Length = 202 Score = 189 bits (480), Expect = 8e-47, Method: Composition-based stats. Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 3/153 (1%) Query: 8 HVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIK 67 L + + S + G C +E+ A +D +RFGI Sbjct: 42 TSKPNNALQYAQMTLHDLTEWCLAYSPWPLTF---GLACCAVEMMHAYASRYDLDRFGIV 98 Query: 68 VVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGG 127 +PR A+I++ +G VT M Y + K +S G+C GGG +H Y+V G Sbjct: 99 PRPTPRQAEIIIVSGTVTNKMAPILRNIYVQMVNPKWVISMGSCANGGGYYHFSYAVLRG 158 Query: 128 SDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQ 160 + +P+D WIPGCPP+ + + ++ Sbjct: 159 CERAIPVDFWIPGCPPSAESLVFCLHTLQKKIR 191 >UniRef50_B0R3U2 NADH dehydrogenase-like complex subunit B n=11 Tax=Halobacteriaceae RepID=B0R3U2_HALS3 Length = 235 Score = 189 bits (479), Expect = 9e-47, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 77/182 (42%), Gaps = 4/182 (2%) Query: 19 TQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGI-KVVSSPRHADI 77 K + + S ++ + G C IE+ + D +RF +SPR AD+ Sbjct: 48 LTKFDKFMNWVRGSSMFMLQF---GIACCSIEMMHTYSVKHDLDRFHAGVPRASPRQADV 104 Query: 78 LLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVW 137 ++ G + R Y+ P+ K V+ G C GG F + Y+V G++ ++P+D+ Sbjct: 105 MIVPGTIVSKFAPRMKRVYDQMPEPKFVVNMGNCSTSGGPFQEGYNVVKGAEEVIPVDIH 164 Query: 138 IPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIEREARR 197 IPGCPP P A ++G A + + P + + ++A + + Sbjct: 165 IPGCPPRPEALVYGVAKLQERIANGESSPVTVKPYELEEFGDLERDEIVDKLAADIDEES 224 Query: 198 LA 199 L Sbjct: 225 LV 226 >UniRef50_Q0RRW7 NADH-quinone oxidoreductase subunit B n=5 Tax=Bacteria RepID=NUOB_FRAAA Length = 281 Score = 188 bits (478), Expect = 1e-46, Method: Composition-based stats. Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 5/152 (3%) Query: 9 VSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIK- 67 + + + +++ R S + G C IE+ + +D RFG++ Sbjct: 3 LEEKLPGGVLLASVEKLANWSRRSSLWPATF---GLACCAIEMMSTGAGRYDLSRFGMEV 59 Query: 68 VVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGG 127 +SPR AD+++ G V++ M + Y+ P+ K +S G C GG+F + Y++ G Sbjct: 60 FRASPRQADLMIVAGRVSQKMAPVLRQIYDQMPEPKWVLSMGVCASSGGMF-NNYAIVQG 118 Query: 128 SDTIVPIDVWIPGCPPTPAATIHGFAVALGLL 159 D IVP+D+++PGCPP P + + Sbjct: 119 VDHIVPVDMYLPGCPPRPEMLMDAIIKLHEKI 150 >UniRef50_A4EBM2 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBM2_9ACTN Length = 195 Score = 188 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 55/136 (40%), Positives = 75/136 (55%) Query: 32 RSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMP 91 RS +V D CN C+IE+ A++TP+FDAERFG+ +P+HADI L TG+V Sbjct: 7 RSPWVIHYDGSSCNGCDIEVLASLTPLFDAERFGVVNTGNPKHADIFLVTGSVNAQNLPV 66 Query: 92 ALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHG 151 + Y + K V+ G C GG+F D Y+V GG D +P+DV+ PGC P I Sbjct: 67 VRQIYNQMLEPKCVVACGICACSGGVFRDAYNVIGGVDRAIPVDVYAPGCAIRPETVIDA 126 Query: 152 FAVALGLLQQKIHAVD 167 A G+L QK + Sbjct: 127 IVEACGILDQKEAVMR 142 >UniRef50_D0L1N9 NADH ubiquinone oxidoreductase 20 kDa subunit n=3 Tax=Proteobacteria RepID=D0L1N9_HALNC Length = 274 Score = 187 bits (476), Expect = 2e-46, Method: Composition-based stats. Identities = 62/164 (37%), Positives = 90/164 (54%) Query: 4 VLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAER 63 +++P T D++ ++ + L RS ++ VD G CN CE EI A + P ++ R Sbjct: 108 ADLSRLARPATPDKKLEEKWQKSLAGFGRSLHIRHVDAGSCNGCESEISALLNPFYNLHR 167 Query: 64 FGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYS 123 G+ SPR AD+LL TG VT MR P LR +E+ P+ + ++ G C GGG Y+ Sbjct: 168 LGVFFTPSPRFADLLLVTGPVTEVMREPLLRTFEAMPEPRWVMALGTCATGGGTNGGGYA 227 Query: 124 VWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVD 167 G D I+P+D+W+PGCPP PAA I V L Q++H Sbjct: 228 CHQGLDGILPVDIWLPGCPPNPAAIIEALLVLLDRRPQQVHGGR 271 >UniRef50_A3PKI1 NADH-quinone oxidoreductase subunit B 2 n=6 Tax=Proteobacteria RepID=NUOB2_RHOS1 Length = 205 Score = 187 bits (475), Expect = 3e-46, Method: Composition-based stats. Identities = 57/200 (28%), Positives = 91/200 (45%), Gaps = 9/200 (4%) Query: 1 MSPVLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFD 60 + + + ++ + + S + + G + C +E+ A+TPV+D Sbjct: 5 IGRPDAEAPEDRMAASHLFTRLDDLVAWSRKHSLWPFNF---GLSCCYVEMATALTPVYD 61 Query: 61 AERFGIKV-VSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFH 119 RFG +V S+PR AD+L+ +G V R M +P R Y + + +S GAC GG++ Sbjct: 62 QARFGAEVIRSTPRQADLLIVSGTVFRKMAVPLYRLYSQMREPRWVISMGACANSGGMY- 120 Query: 120 DLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPL 179 D+YSV G D+ +P+DV++PGCPP P A + + Q KI + Sbjct: 121 DIYSVVQGVDSFLPVDVYVPGCPPRPEALMEALVLL----QSKIATEARPLQIRMGETGP 176 Query: 180 WPQIPPSQRIAIEREARRLA 199 P R REAR Sbjct: 177 ARPFDPIPRRDALREARMAV 196 >UniRef50_B2V8R1 NADH ubiquinone oxidoreductase 20 kDa subunit n=3 Tax=Aquificales RepID=B2V8R1_SULSY Length = 173 Score = 187 bits (474), Expect = 4e-46, Method: Composition-based stats. Identities = 57/148 (38%), Positives = 85/148 (57%) Query: 11 QPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVS 70 + ++ +++K + + + S + VD G CNACE EI A P +D ERFG+K V+ Sbjct: 21 RDENVEILGKQLKEKIDKYFQGSFAIREVDSGSCNACEYEISALSNPYYDIERFGVKFVA 80 Query: 71 SPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDT 130 SP+HAD ++ TG +TR M ++AYE+ P+ K ++ G C + GG F Y+V G Sbjct: 81 SPKHADAIMITGCLTRNMYEAVMKAYENVPNPKFIIAVGDCALDGGTFKGSYAVMDGIKD 140 Query: 131 IVPIDVWIPGCPPTPAATIHGFAVALGL 158 +PID+WI GCPP P I G + L Sbjct: 141 KLPIDIWIKGCPPEPIDIISGLLILLNK 168 >UniRef50_Q12F15 NADH ubiquinone oxidoreductase, 20 kDa subunit n=15 Tax=Proteobacteria RepID=Q12F15_POLSJ Length = 181 Score = 187 bits (474), Expect = 4e-46, Method: Composition-based stats. Identities = 57/149 (38%), Positives = 85/149 (57%) Query: 19 TQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADIL 78 +++ R +L + ++ + VD G CN CE+EI A P ++ E GIK V+SPRHAD+L Sbjct: 29 IERIHRDILLILGQALTIRAVDAGSCNGCELEIHALNNPYYNIEGLGIKFVASPRHADML 88 Query: 79 LFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWI 138 L TG V+R M R Y++ P+ K+ V+ G CG GGIF D Y+ G ++P+DV + Sbjct: 89 LVTGPVSRHMDEALRRTYDATPEPKLVVAVGDCGCTGGIFGDSYASCGRVANVIPVDVTV 148 Query: 139 PGCPPTPAATIHGFAVALGLLQQKIHAVD 167 PGCPP P + G A+ + + Sbjct: 149 PGCPPPPIEILRGILTAVRQRRPGTAGDN 177 >UniRef50_D2EGC1 NADH-quinone oxidoreductase, B subunit n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EGC1_9EURY Length = 172 Score = 187 bits (474), Expect = 4e-46, Method: Composition-based stats. Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 4/141 (2%) Query: 22 MKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVS-SPRHADILLF 80 + L S + G + C IE+ DA+R G+ SPR +D++L Sbjct: 24 INTVLNWGRSNSLWPLTF---GTSCCAIEMMTFGATKVDADRLGVLFNGDSPRQSDLILV 80 Query: 81 TGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPG 140 +G +T+ M L YE PD K ++ GAC V GG++HD Y+ G D I+P+D +IPG Sbjct: 81 SGTITKKMARRLLNVYEQIPDPKYVIAVGACNVSGGLYHDSYNTIEGIDRIMPVDAFIPG 140 Query: 141 CPPTPAATIHGFAVALGLLQQ 161 CPP P + V L+++ Sbjct: 141 CPPRPEEFLDAVRVLQKLIKE 161 >UniRef50_Q2S5J2 NADH-quinone oxidoreductase subunit B n=4 Tax=Bacteria RepID=NUOB_SALRD Length = 213 Score = 186 bits (473), Expect = 5e-46, Method: Composition-based stats. Identities = 48/178 (26%), Positives = 77/178 (43%), Gaps = 6/178 (3%) Query: 19 TQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIK-VVSSPRHADI 77 T ++ L S + G C IE+ P +D+ RFG + + SPR AD+ Sbjct: 14 TTRVDTFLNWARSNSLMPMPM---GLACCAIEMMGFAGPKYDSARFGSEAMRFSPRQADL 70 Query: 78 LLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVW 137 ++ G + M R ++ D K C++ GAC GG+ H Y V G D +P+DV+ Sbjct: 71 MIVAGWCSYKMSHAIRRVWDQMGDPKWCIAMGACASTGGM-HRCYGVVQGVDNFLPVDVY 129 Query: 138 IPGCPPTPAATIHGFAVALGLLQQKIH-AVDYRDPTGVTMQPLWPQIPPSQRIAIERE 194 I GCPP P + +H ++ + DY P+ P+ +E+ Sbjct: 130 ISGCPPRPESVLHALMDIQEKIRNEYSVVQDYEFGKARERAPIMPENTNRFPGQLEKP 187 >UniRef50_A9GUX6 NADH-quinone oxidoreductase subunit B 1 n=10 Tax=Bacteria RepID=NUOB1_SORC5 Length = 194 Score = 186 bits (472), Expect = 6e-46, Method: Composition-based stats. Identities = 52/182 (28%), Positives = 79/182 (43%), Gaps = 11/182 (6%) Query: 19 TQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIK-VVSSPRHADI 77 T ++ L + S + Y C +E A +P FD RFG + SPR AD+ Sbjct: 23 TTRVDALLNWAKKYSLFQYPFVT---ACCGMEYMAMASPRFDMARFGAEVPRFSPRQADL 79 Query: 78 LLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVW 137 L G +++ R YE D K +++G C GG F+D Y+ G D ++P DV+ Sbjct: 80 LWVVGTISQRQAPALKRIYEQMADPKWVLAFGTCASCGG-FYDNYTTVAGIDKVIPCDVY 138 Query: 138 IPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIEREARR 197 +PGCPP P A + G + Q KI D + + ++R+ R Sbjct: 139 VPGCPPRPEAVLDGLMLL----QDKIARGDRTPAIVKPREDPAQTTEHL--VTLQRKERS 192 Query: 198 LA 199 L Sbjct: 193 LP 194 >UniRef50_C1VB41 NADH dehydrogenase subunit B n=1 Tax=Halogeometricum borinquense DSM 11551 RepID=C1VB41_9EURY Length = 236 Score = 186 bits (471), Expect = 8e-46, Method: Composition-based stats. Identities = 45/182 (24%), Positives = 77/182 (42%), Gaps = 4/182 (2%) Query: 19 TQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGI-KVVSSPRHADI 77 K + S ++ + G C IE+ + D +RF +SPR AD+ Sbjct: 49 LTKFDNFMNWVRGSSMFMLQF---GIACCSIEMMHTYSVKHDLDRFAAGVPRASPRQADV 105 Query: 78 LLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVW 137 ++ G + R Y+ P+ K V G+C V GG F + Y+V G++ ++P+D+ Sbjct: 106 IIVPGTIVSKFAPRMKRVYDQMPEPKFVVGMGSCTVSGGPFQEGYNVIKGAEEVIPVDIH 165 Query: 138 IPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIEREARR 197 +PGCPP P A I+G A + + + P + Q +A + + Sbjct: 166 VPGCPPRPEALIYGVAKLQQRIAEGESSPVTVKPYELEQFGDLEQDELIDHLADQIDEED 225 Query: 198 LA 199 L Sbjct: 226 LV 227 >UniRef50_C5CEV5 NADH ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=cellular organisms RepID=C5CEV5_KOSOT Length = 137 Score = 185 bits (470), Expect = 1e-45, Method: Composition-based stats. Identities = 56/132 (42%), Positives = 76/132 (57%) Query: 28 QDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRA 87 + ++RS +V+ V CN C+IEI +TP +D ERFGIK+V S RHAD+LL TG Sbjct: 6 KILKRSLWVFHVSASPCNNCDIEILDMLTPRYDLERFGIKLVGSVRHADVLLVTGMGGCK 65 Query: 88 MRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAA 147 + +R Y AP ++ G C V G F + Y+ G D VP+D++IPGCPP P Sbjct: 66 VSERVIRIYNQAPKPVFVIAVGTCPVAGATFKESYTRCGPLDRFVPVDLYIPGCPPKPET 125 Query: 148 TIHGFAVALGLL 159 I G + LG L Sbjct: 126 MIAGLSELLGRL 137 >UniRef50_A5FW47 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FW47_ACICJ Length = 264 Score = 184 bits (467), Expect = 3e-45, Method: Composition-based stats. Identities = 56/140 (40%), Positives = 76/140 (54%), Gaps = 1/140 (0%) Query: 28 QDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRA 87 + RRS +V VD G CN CE E+ A P ++ R GI SPR AD+LL TG VTRA Sbjct: 122 RGFRRSLHVRHVDAGSCNGCESELQALNNPFYNLHRLGIFFTPSPRFADLLLVTGPVTRA 181 Query: 88 MRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAA 147 M P R +E+ P + ++ G C V GGI G + +P+D+++PGCPP PAA Sbjct: 182 MLEPLRRTWEAMPAPRWVMASGTCAVSGGIAPGGP-CLSGLEEALPVDLYLPGCPPNPAA 240 Query: 148 TIHGFAVALGLLQQKIHAVD 167 I + LG Q++ Sbjct: 241 IIEALLMFLGRRAQRVRGGR 260 >UniRef50_C7DI98 NADH-quinone oxidoreductase, B subunit n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI98_9EURY Length = 206 Score = 182 bits (463), Expect = 6e-45, Method: Composition-based stats. Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 4/159 (2%) Query: 26 LLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFG-IKVVSSPRHADILLFTGAV 84 + S + G C IE+ DAER G + +PR D+++ G V Sbjct: 51 VKWSRSNSMWPMLF---GLACCAIELMDFGAARIDAERKGYLLFRGTPRQCDVMIVAGWV 107 Query: 85 TRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPT 144 T++M R YE K V+YG C GG +++ Y++ G D ++P+DV+ GCPP Sbjct: 108 TKSMVPRVKRLYEQMASPKYVVAYGECATAGGPWYESYNIVKGIDQVLPVDVYAIGCPPK 167 Query: 145 PAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQI 183 P + K+ + R + ++ Sbjct: 168 PENLFAALMKLQEKVGGKVAGSEERTIAENPRRAENERV 206 >UniRef50_Q2T5T7 Formate hydrogenlyase subunit 7 n=21 Tax=Bacteria RepID=Q2T5T7_BURTA Length = 174 Score = 182 bits (462), Expect = 9e-45, Method: Composition-based stats. Identities = 57/157 (36%), Positives = 85/157 (54%) Query: 4 VLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAER 63 + Q +++ +L + R+ + +D G CN CE+E+ A P ++ E Sbjct: 14 PDEPAPAGEPAWQRDAQPIRQEILDILGRALCIRAIDAGSCNGCELELNALGNPYYNIEG 73 Query: 64 FGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYS 123 GIK V+SPRHAD+LL TG +T MR AY++ P K+ V+ G C GG+F Y+ Sbjct: 74 LGIKFVASPRHADMLLITGPLTLNMRDAVRLAYDATPAPKLVVAAGDCACTGGVFAGSYA 133 Query: 124 VWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQ 160 V G +T+VP+DV I GCPP P + G AL ++ Sbjct: 134 VCGPVETLVPVDVAIAGCPPRPIDLLRGIRGALERVR 170 >UniRef50_B5E8B5 NADH ubiquinone oxidoreductase 20 kDa subunit n=13 Tax=Bacteria RepID=B5E8B5_GEOBB Length = 332 Score = 182 bits (462), Expect = 9e-45, Method: Composition-based stats. Identities = 72/227 (31%), Positives = 106/227 (46%), Gaps = 18/227 (7%) Query: 22 MKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITP-VFDAERFGIKVVSSPRHADILLF 80 M+ + + ++R++ G CN C++E+ FD E+ G + P ADILL Sbjct: 1 MQDQVKETPAEPVRLFRINTGSCNGCDVELAVTAAVDEFDVEQLGCRYTEEPHEADILLI 60 Query: 81 TGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPG 140 TG +T R ALR Y AP+ K+ V+ G C V GG+F D Y+V G +P+D+ +PG Sbjct: 61 TGPLTVRARNEALRLYAEAPETKVTVAVGVCPVSGGVFRDSYAVDGPVQRYLPVDLNVPG 120 Query: 141 CPPTPAATIHGFAVALGLLQQKIHAVDYR---DPTGVTMQPLWPQIPPSQRIAIEREARR 197 CPP P A + G A A L + + VD P Q P R++ + +A Sbjct: 121 CPPRPQALLAGIAQARDLWRARSKGVDAVFAAPPLAKPADEPAQQFPIRGRMSFDPKA-- 178 Query: 198 LAGYRQGREIC-----------DRLLRHL-SDDPTGNRVNTWLRDAD 232 R R +C D+ RHL S P+GN+ + LR Sbjct: 179 CVDCRMCRHVCAAGAIHFDIKGDKGDRHLRSQSPSGNKEDRHLRSLS 225 >UniRef50_B9L626 NADH-ubiquinone oxidoreductase 20 kDa subunit n=3 Tax=Epsilonproteobacteria RepID=B9L626_NAUPA Length = 157 Score = 182 bits (461), Expect = 1e-44, Method: Composition-based stats. Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 10/163 (6%) Query: 21 KMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLF 80 K+ +S ++ G C +E+ AA+ P +D ER+G + +PR ADI+ Sbjct: 3 KVLDFFNYARSKSPWIVHFCSG---CCSLEMLAAMGPRYDWERYGYIMTPTPRQADIMFI 59 Query: 81 TGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPG 140 TG V++ + LR YE P+ + V+ GAC GG ++D SV I+P DV++ G Sbjct: 60 TGLVSKKILPALLRTYEQMPEPRYVVAIGACAYDGGPYNDSVSVIKNMTEILPADVFVAG 119 Query: 141 CPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQI 183 CPP P A I G +++ +P+ + LW Q+ Sbjct: 120 CPPRPEAIIAGLEELKEKIKR-------GEPSASSQGGLWKQM 155 >UniRef50_B6YWP9 NADH dehydrogenase (Ubiquinone), 20 kDa subunit n=4 Tax=Archaea RepID=B6YWP9_THEON Length = 191 Score = 182 bits (461), Expect = 1e-44, Method: Composition-based stats. Identities = 64/161 (39%), Positives = 88/161 (54%), Gaps = 11/161 (6%) Query: 31 RRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRM 90 + S +V+ ++ G CN C+IEI P D ER GIK+V SPRHAD + FTG +TR Sbjct: 3 KNSLWVFHLNSGSCNGCDIEILNIFAPRNDVERLGIKLVGSPRHADAIAFTGPITRECLP 62 Query: 91 PALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTI-----------VPIDVWIP 139 + A ++ P+ K+ ++ GAC GGGI++D YSV GG + P V+IP Sbjct: 63 KVIDALKAVPEPKVVLAIGACACGGGIWYDTYSVIGGVKELYRILKEEYNMEPPATVFIP 122 Query: 140 GCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLW 180 GCPP P A I+G AVA G+L+ K Y +P Sbjct: 123 GCPPKPEAIIYGVAVASGMLESKQKKTVYVEPEESVANEKL 163 >UniRef50_Q24ST9 Formate hydrogenlyase subunit 7 n=2 Tax=Desulfitobacterium hafniense RepID=Q24ST9_DESHY Length = 155 Score = 181 bits (458), Expect = 2e-44, Method: Composition-based stats. Identities = 52/151 (34%), Positives = 86/151 (56%) Query: 5 LTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERF 64 L + + L E+ + L+ +R+S ++ +DCG CN C+ E+ A + P++D +RF Sbjct: 4 LLKRSLKMGRLSEKRLEQGEAHLRSLRQSWHIRHLDCGSCNGCDWEMSALLNPIYDLQRF 63 Query: 65 GIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSV 124 G+ V+SPRHADIL+ TG ++ + AL YE P+ K ++ G C + GG+F + Y+ Sbjct: 64 GLDFVASPRHADILMCTGPMSTHLIQAALATYEGTPNPKRIIAVGDCALDGGMFKEAYAA 123 Query: 125 WGGSDTIVPIDVWIPGCPPTPAATIHGFAVA 155 G +P+D+ IPGCPP+P + Sbjct: 124 HNGVGEALPVDIKIPGCPPSPDELLKVLLQL 154 >UniRef50_C6X0Z2 NADH-ubiquinone oxidoreductase chain B n=2 Tax=Flavobacteriaceae RepID=C6X0Z2_FLAB3 Length = 185 Score = 180 bits (456), Expect = 5e-44, Method: Composition-based stats. Identities = 47/145 (32%), Positives = 72/145 (49%), Gaps = 5/145 (3%) Query: 19 TQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIK-VVSSPRHADI 77 K+ + + S + + C IE A + P +DA RFG++ SPR AD+ Sbjct: 25 ATKLSSVIGMARKYSLWPLPFAT---SCCGIEFMAVLNPTYDASRFGMERNSFSPRQADM 81 Query: 78 LLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVW 137 L+ G +++ + + Y + + V+ GAC GGIF D YSV G D I+P+DV+ Sbjct: 82 LMVCGTISKKLGPVLKQVYTQMAEPRWVVAVGACASSGGIF-DTYSVLQGIDKIIPVDVY 140 Query: 138 IPGCPPTPAATIHGFAVALGLLQQK 162 +PGCPP P I G L + + Sbjct: 141 VPGCPPRPEQIIEGVMQVQALCEGE 165 >UniRef50_Q57936 Uncharacterized protein MJ0516 n=21 Tax=Euryarchaeota RepID=Y516_METJA Length = 148 Score = 179 bits (455), Expect = 6e-44, Method: Composition-based stats. Identities = 58/142 (40%), Positives = 84/142 (59%), Gaps = 5/142 (3%) Query: 30 IRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMR 89 +RS +V V+ GGCN C+IEI A + P +D E++GI V ++PR AD+LL TG VT Sbjct: 7 RKRSIHVCVVNTGGCNGCDIEIVACLAPRYDIEQYGIYVHNNPREADVLLVTGPVTLQWA 66 Query: 90 MPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATI 149 YE P+ KI V+ GAC + GGIF + + V GG D ++P+D IPGCPP P+ I Sbjct: 67 ERLKEIYEKTPEPKIVVAVGACALSGGIFKEGH-VVGGVDKVIPVDAKIPGCPPRPSEII 125 Query: 150 HGFA----VALGLLQQKIHAVD 167 A+ + ++++ D Sbjct: 126 ETILKVAPKAIAMREKRLKNKD 147 >UniRef50_Q0W6T1 [NiFe]-hydrogenase, small subunit (EchC-like) n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W6T1_UNCMA Length = 135 Score = 179 bits (454), Expect = 8e-44, Method: Composition-based stats. Identities = 57/134 (42%), Positives = 80/134 (59%), Gaps = 2/134 (1%) Query: 27 LQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTR 86 + I+RS +VY GGC C+IE+ A++ P +D ER G+++V SPR+AD+LL TG V Sbjct: 1 MNMIKRSPWVYHAHAGGCVGCDIELVASMGPRYDLERLGVRLVPSPRYADVLLVTGPVPL 60 Query: 87 AMRMPALRAYESAPDHKICVSYGACGVGGGIFHD--LYSVWGGSDTIVPIDVWIPGCPPT 144 + R Y P+ K ++ GACG G+F D YS+ G D I+P+DV IPGCPP Sbjct: 61 HTKPFLERVYAQTPEPKRVIAIGACGCSCGVFIDDENYSIAGPVDKIIPVDVKIPGCPPK 120 Query: 145 PAATIHGFAVALGL 158 P A + G L + Sbjct: 121 PEAIMEGIIKVLRM 134 >UniRef50_A6Q6W5 Ni-Fe hydrogenase, small subunit HycG n=3 Tax=Epsilonproteobacteria RepID=A6Q6W5_SULNB Length = 168 Score = 177 bits (450), Expect = 2e-43, Method: Composition-based stats. Identities = 54/155 (34%), Positives = 79/155 (50%) Query: 5 LTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERF 64 LT+ + L+ +++K ++ + S + VD G CNACE E A P +D ER Sbjct: 14 LTEDTALDKELEAIKREIKENVKKKFAGSLAIRMVDSGSCNACEAECNALSNPYYDLERL 73 Query: 65 GIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSV 124 GI V+SPRHAD++L G +T M L AY+ P+ K ++ GAC V F ++V Sbjct: 74 GIYFVASPRHADVMLLNGLMTFNMTPHVLDAYKQIPEPKWVITLGACPVMEAPFEKTFAV 133 Query: 125 WGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLL 159 + +P+ IPGCPP P I G L + Sbjct: 134 KAPAADHLPVAHHIPGCPPEPLEIIRGLLEFLKKI 168 >UniRef50_C5A4Q2 Membrane bound oxidoreductase, MbxJ subunit (MbxJ) n=11 Tax=cellular organisms RepID=C5A4Q2_THEGJ Length = 194 Score = 173 bits (439), Expect = 4e-42, Method: Composition-based stats. Identities = 50/168 (29%), Positives = 77/168 (45%), Gaps = 6/168 (3%) Query: 13 ITLDEQTQKMKRHL-LQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSS 71 I+ + Q K+ L ++S ++ G C IE+ T +D ERFGI + Sbjct: 8 ISYELQEFKLFEPLFRWARKKSLWIVAFCTG-CGG--IEMPPLATARYDFERFGIMPNPA 64 Query: 72 PRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTI 131 PR AD+ L TG VT + YE D K +++G+C + GG++ D Y+V D Sbjct: 65 PRMADLFLITGYVTPKTLKRIIITYEMMQDPKYVLAHGSCPINGGVYWDSYNVVKQLDKY 124 Query: 132 VPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAV--DYRDPTGVTMQ 177 +PIDV I GC P P A + G + ++ YR+ + Sbjct: 125 IPIDVAIAGCMPRPEAVMDGIMEIMRKIENGEADGWKRYRENYEWYRK 172 >UniRef50_A0L9R6 Membrane bound protein complex subunit mbxJ n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9R6_MAGSM Length = 213 Score = 173 bits (438), Expect = 5e-42, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 73/154 (47%), Gaps = 3/154 (1%) Query: 8 HVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIK 67 + + E Q ++ S +V G IE+ +TP FDA R+G++ Sbjct: 29 EATPTVQTGEYLQIVEDLFNWARSNSIWVLGF---GTGCGAIEMRPLMTPRFDAYRYGVQ 85 Query: 68 VVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGG 127 ++PR +++ + +G ++ +RAYE K + G+C + GG++ D Y+ Sbjct: 86 WRATPRQSNLFIVSGYLSVKTLKRVVRAYEQMQSPKYVMGLGSCTINGGMYWDSYNTIKQ 145 Query: 128 SDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQ 161 D +P+D+++ GC P P A + G ++++ Sbjct: 146 LDDYLPVDLYVTGCMPRPEALLSGIEALKKIIRE 179 >UniRef50_A4WJL4 NADH-quinone oxidoreductase, B subunit n=6 Tax=Thermoproteaceae RepID=A4WJL4_PYRAR Length = 196 Score = 172 bits (436), Expect = 9e-42, Method: Composition-based stats. Identities = 44/162 (27%), Positives = 73/162 (45%), Gaps = 4/162 (2%) Query: 1 MSPVLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFD 60 M T + K+++ +R S + + + C +E+ P FD Sbjct: 1 MDKPTTSMSQALREFLLKKAKLEKIFNWGVRWSLWPVHLVT---SCCGVEVAHTSGPGFD 57 Query: 61 AERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHD 120 AER+G+ + R ++++L G +TR M YE P+ K ++ GAC V GG+F + Sbjct: 58 AERWGVLPFHTMRQSNVILVEGTITRKMAKVLKMVYEQMPEPKFVLAMGACAVRGGLFWN 117 Query: 121 LYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQK 162 Y V + V+I GCPPTP A + F + ++ K Sbjct: 118 SYHVVQVDTVVPVD-VYIAGCPPTPEAVVRAFIMLHNKIKGK 158 >UniRef50_A3DM92 NADH-quinone oxidoreductase, B subunit n=1 Tax=Staphylothermus marinus F1 RepID=A3DM92_STAMF Length = 179 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 51/176 (28%), Positives = 78/176 (44%), Gaps = 12/176 (6%) Query: 28 QDIRRSAYVYRVDCGGCNAC-EIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTR 86 RS ++ C+AC IE+ + DAER+GI SPR AD+L+ G VT+ Sbjct: 14 WVRSRSIWMIHY----CSACGAIELPPNMMAPLDAERWGIMPAPSPRQADVLVIMGYVTK 69 Query: 87 AMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPA 146 +R Y P+ + + C GG++ D YS D +P+DVW+PGC P Sbjct: 70 KTLKVLMRLYHQMPEPRYVMVGCNCPATGGLYWDSYSTVKAVDEFLPVDVWVPGCMPRAE 129 Query: 147 ATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIEREARRLAGYR 202 + GF L++KI +P V ++ + IE + +A R Sbjct: 130 DWLQGFL----KLRKKISEGRIVNPRPVEEPGELEELIYRE---IEMREKMMAKVR 178 >UniRef50_C7JEU9 NADH-ubiquinone oxidoreductase 20 kDa subunit n=8 Tax=Acetobacter pasteurianus RepID=C7JEU9_ACEP3 Length = 165 Score = 170 bits (431), Expect = 4e-41, Method: Composition-based stats. Identities = 54/139 (38%), Positives = 78/139 (56%) Query: 20 QKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILL 79 Q M+R R ++ VD GGC C +E+ A +D E G V+SPR+AD+LL Sbjct: 14 QDMRRMKPVGPRWPLLLFHVDTGGCGGCGMELQALRYAPYDMEGAGFGFVTSPRNADVLL 73 Query: 80 FTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIP 139 TGA+TRAM A+++ P K ++ G+C + GG+F + Y+V GG + V ID+ IP Sbjct: 74 ITGALTRAMAPVLEAAWQAMPTPKGLIAVGSCALDGGMFPENYTVLGGLERRVSIDLKIP 133 Query: 140 GCPPTPAATIHGFAVALGL 158 GCPP P ++G G Sbjct: 134 GCPPAPQDVLNGLCSLFGK 152 >UniRef50_B8IYV4 NADH ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=Desulfovibrio RepID=B8IYV4_DESDA Length = 254 Score = 170 bits (430), Expect = 5e-41, Method: Composition-based stats. Identities = 57/154 (37%), Positives = 83/154 (53%), Gaps = 6/154 (3%) Query: 4 VLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAER 63 V + V+QP T + RRS + +V GCNACE + T VFD R Sbjct: 107 VPGKPVTQPATPPVPGK------FAIFRRSLKLRQVSAAGCNACEADCNVLGTLVFDLPR 160 Query: 64 FGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYS 123 FGI V+SPRHAD ++ TG V+ MR+ A+ Y + P+ ++ V+ GAC + GG+F D Sbjct: 161 FGIDFVASPRHADGIVLTGPVSENMRLAAIDTYNATPEPRLVVAVGACAISGGLFRDAPQ 220 Query: 124 VWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALG 157 G I+P+D+++PGCPP P + G + Sbjct: 221 CNNGIADILPVDLFVPGCPPNPWTILDGLLMLRE 254 >UniRef50_A9BJL8 NADH ubiquinone oxidoreductase 20 kDa subunit n=8 Tax=cellular organisms RepID=A9BJL8_PETMO Length = 195 Score = 169 bits (429), Expect = 5e-41, Method: Composition-based stats. Identities = 40/155 (25%), Positives = 74/155 (47%), Gaps = 5/155 (3%) Query: 13 ITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNAC-EIEIFAAITPVFDAERFGIKVVSS 71 L++ ++ +S ++ C C +E+ +T FD ER G+ +++ Sbjct: 15 EDLNDTITFWEKIKNIFRGKSLWMLHY----CTGCGAVELPPTMTARFDMERLGMGPMAT 70 Query: 72 PRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTI 131 PR AD+LL TG ++ + YE K V +G+C + GGI++D Y+V D Sbjct: 71 PRQADVLLITGYLSVKTLRRVIYTYEQMMTPKYLVGFGSCTINGGIYYDSYAVINRLDYY 130 Query: 132 VPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAV 166 +P+D+++ GC P P A ++ F ++ + Sbjct: 131 LPVDLYVAGCMPRPEAIMNTFKTLENMITKGEANG 165 >UniRef50_Q6C2Q1 YALI0F06050p n=1 Tax=Yarrowia lipolytica RepID=Q6C2Q1_YARLI Length = 216 Score = 169 bits (428), Expect = 7e-41, Method: Composition-based stats. Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 3/131 (2%) Query: 4 VLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAER 63 L +D + + S + G C +E+ P +D +R Sbjct: 46 PLPSQQKPNSAVDYTLTTLDAVANWARQGSFWPVTF---GLACCAVEMMHVSAPRYDQDR 102 Query: 64 FGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYS 123 GI +SPR +DI++ G +T M + Y+ P+ + +S G+C GGG +H YS Sbjct: 103 LGIIFRASPRQSDIMIVAGTLTNKMAPVLRQVYDQMPEPRWVISMGSCANGGGYYHFSYS 162 Query: 124 VWGGSDTIVPI 134 V G D IVP+ Sbjct: 163 VVRGCDRIVPV 173 >UniRef50_C7IWD0 Os01g0791600 protein n=3 Tax=Oryza sativa Japonica Group RepID=C7IWD0_ORYSJ Length = 379 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 45/104 (43%), Positives = 61/104 (58%), Gaps = 1/104 (0%) Query: 56 TPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGG 115 FD +R+G+ SSPR AD++L G VT M +R YE P+ K ++ GAC + G Sbjct: 150 GSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITG 209 Query: 116 GIFH-DLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGL 158 G+F D YS G D ++P+DV++PGCPP P A I LGL Sbjct: 210 GMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDALTKLLGL 253 >UniRef50_Q21TB3 NADH ubiquinone oxidoreductase, 20 kDa subunit n=2 Tax=Proteobacteria RepID=Q21TB3_RHOFD Length = 254 Score = 167 bits (423), Expect = 3e-40, Method: Composition-based stats. Identities = 50/144 (34%), Positives = 77/144 (53%), Gaps = 2/144 (1%) Query: 15 LDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRH 74 + K+ + L + RS + V GGC+ CE+EI A FD R+GI +V+SPRH Sbjct: 109 PNLDPIKVSKALHKRFGRSLKLRSVSAGGCSGCEMEINALSNVNFDLGRYGIDIVASPRH 168 Query: 75 ADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSV-WGGSDTIVP 133 AD L+ +G +TR M +++ P+ K+ ++ GAC + GG+F D ++ D P Sbjct: 169 ADALVLSGPITRNMAQALQICWDAIPEPKLVIAVGACAISGGVFADSDALDRQFLDNFKP 228 Query: 134 IDVWIPGCPPTPAATIHGFAVALG 157 +++PGCP P I G LG Sbjct: 229 A-LYVPGCPAHPLTFISGIMDLLG 251 >UniRef50_B8D5A0 NADH-quinone oxidoreductase, B subunit n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D5A0_DESK1 Length = 337 Score = 165 bits (419), Expect = 8e-40, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 74/193 (38%), Gaps = 15/193 (7%) Query: 22 MKRHLLQDIRRSAYVYRVDCGGCNAC-EIEIFAAITPVFDAERFGIKVVSSPRHADILLF 80 ++R RS ++ C+AC +E + D ER+G SPR +D+ + Sbjct: 2 LERIARWAYARSLWMIHY----CSACGAVEFPPLVMAPLDWERYGYMPTPSPRQSDLYIG 57 Query: 81 TGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPG 140 G +T+ L Y P+ K+ ++ C GG + D Y+ + D + ++ W+PG Sbjct: 58 MGYLTKKTVKLVLNMYRQMPEPKLVLAGCNCTSTGGPYWDSYATYKRLDDFIEVEGWVPG 117 Query: 141 CPPTPAATIHGFAVALGLLQQ--------KIHAVDYRDPTGVTMQPLWPQIPPSQRIAIE 192 C P P + L + KI ++ + + ++ I+ Sbjct: 118 CMPMPDDYLSMIEYVRKDLGKRPLNAYVSKIKPDAFKKISEWEELEKQWRKEYEEK--IK 175 Query: 193 REARRLAGYRQGR 205 ++ + Y Sbjct: 176 EDSSKPVSYEFKE 188 >UniRef50_UPI0001C31273 NADH-quinone oxidoreductase, B subunit n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31273 Length = 229 Score = 164 bits (416), Expect = 2e-39, Method: Composition-based stats. Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 6/155 (3%) Query: 6 TQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFG 65 + + Q + T + + S + G C IE+ + D RFG Sbjct: 37 DRELEQYVEERVLTTTLDKVTAWARGNSMFPATF---GLACCAIEMMSLPGARLDIGRFG 93 Query: 66 IK-VVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSV 124 + +SPR AD+L+ +G V+ M R Y+ + + +S GAC G+F + Y++ Sbjct: 94 FEAFRASPRQADMLILSGRVSIKMAPIVRRIYDQMLEPRWAISMGACCSSMGVF-NNYAL 152 Query: 125 WGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLL 159 +D +PIDV +PGCPP P A H + Sbjct: 153 V-PADKFMPIDVHVPGCPPRPEALAHAILKLRSKV 186 >UniRef50_A3ETD3 Putative hydrogenase-3 (HycG) n=3 Tax=Leptospirillum RepID=A3ETD3_9BACT Length = 169 Score = 164 bits (416), Expect = 2e-39, Method: Composition-based stats. Identities = 50/155 (32%), Positives = 73/155 (47%), Gaps = 6/155 (3%) Query: 1 MSPVLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFD 60 + L P+ D + + S + VD G CNACE+E+ A + Sbjct: 9 LKTGLLTEARPPLPPDASAPFL------PVGGSLSIRHVDAGSCNACELELHAMNGSYYA 62 Query: 61 AERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHD 120 ER GI+ V+SPRHAD+LL TG V+ M P L +E+ K ++ G C GG+F Sbjct: 63 PERDGIRFVASPRHADLLLVTGPVSCQMEQPLLDTHEAMASPKTVLAVGDCACQGGVFRG 122 Query: 121 LYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVA 155 +V G D + P +PGCPP+P+ + Sbjct: 123 SPAVRNGVDGLFPEARKVPGCPPSPSDILRALRGL 157 >UniRef50_A1SQ82 NADH ubiquinone oxidoreductase, 20 kDa subunit n=15 Tax=Actinomycetales RepID=A1SQ82_NOCSJ Length = 162 Score = 163 bits (413), Expect = 5e-39, Method: Composition-based stats. Identities = 53/126 (42%), Positives = 71/126 (56%) Query: 33 SAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPA 92 S + VD G CN CEIE+ A PV+DAER+G ++V+SPRHAD++L TG VT M P Sbjct: 37 SVQIRHVDAGSCNGCEIEVGGAFGPVYDAERYGARLVASPRHADVVLVTGVVTHNMLEPL 96 Query: 93 LRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGF 152 R E+ P ++ ++ G C G F Y V G V +D+ +PGCPP PAA + Sbjct: 97 RRTVEATPRPRLVLAVGDCARNCGAFKGGYGVAGAVHDAVDVDLEVPGCPPEPAAIVDAL 156 Query: 153 AVALGL 158 G Sbjct: 157 RRVTGR 162 >UniRef50_C1XWY8 Ni,Fe-hydrogenase III small subunit n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XWY8_9DEIN Length = 290 Score = 162 bits (410), Expect = 9e-39, Method: Composition-based stats. Identities = 52/140 (37%), Positives = 74/140 (52%) Query: 33 SAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPA 92 + V G + E+ A P D RFG VV+SPRHAD LL TG V++ MR Sbjct: 127 TLAFREVSAGNTGLDDTEVALAGNPFHDMSRFGFSVVASPRHADALLVTGPVSQNMREAL 186 Query: 93 LRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGF 152 R Y++ P+ K V+ G +GG IF + +V GG D +VP+DV++PG P PA+ +HG Sbjct: 187 WRTYQATPEPKGVVAVGNEAIGGEIFAESAAVVGGVDQVVPVDVYVPGSPARPASILHGL 246 Query: 153 AVALGLLQQKIHAVDYRDPT 172 + G QQ + + Sbjct: 247 LLLSGQTQQVLVGGRLHEER 266 >UniRef50_C5U7Y6 NADH ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=Euryarchaeota RepID=C5U7Y6_9EURY Length = 154 Score = 160 bits (406), Expect = 3e-38, Method: Composition-based stats. Identities = 46/146 (31%), Positives = 79/146 (54%), Gaps = 8/146 (5%) Query: 25 HLLQDIRRSAYVYRVDCGGCNACEIE-IFAAITPVFDAERFGIKVVSSPRHADILLFTGA 83 ++ +V V GGCN C+IE + A +P +DAE++ + + +PR DIL+ +G Sbjct: 9 MKKISRKKCIHVMLVYTGGCNGCDIEAVNAVFSPYYDAEQYNVFLTFNPRETDILIVSGC 68 Query: 84 VTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHD-------LYSVWGGSDTIVPIDV 136 VT+ ++ + YE P+ K V+ G+C + GG++ + V G + I+P+DV Sbjct: 69 VTKFVKESLRKIYEKIPEPKAVVAIGSCALTGGVYKNIGGDLGTSDFVAGPVENIIPVDV 128 Query: 137 WIPGCPPTPAATIHGFAVALGLLQQK 162 +PGC P P I G A+ L+ ++ Sbjct: 129 KVPGCAPRPEDIISGIVKAIPLVVER 154 >UniRef50_Q58758 Uncharacterized protein MJ1363 n=17 Tax=Euryarchaeota RepID=Y1363_METJA Length = 151 Score = 160 bits (405), Expect = 3e-38, Method: Composition-based stats. Identities = 50/143 (34%), Positives = 78/143 (54%), Gaps = 8/143 (5%) Query: 27 LQDIRRSAYVYRVDCGGCNACEIEI-FAAITPVFDAERFGIKVVSSPRHADILLFTGAVT 85 ++ +V V GGCNAC+IE+ A +P +DAE++ + + +PR ADIL+ TG VT Sbjct: 7 KIARKKCIHVMLVYTGGCNACDIEVVNAIFSPFYDAEQYNVFLTFNPREADILVVTGCVT 66 Query: 86 RAMRMPALRAYESAPDHKICVSYGACGVGGGIFHD-------LYSVWGGSDTIVPIDVWI 138 + + + YE P+ K V+ GAC + GG++ + V G + I+P+DV + Sbjct: 67 KVVAESLRKIYEKIPEPKAVVAVGACALMGGVYKNIGGDLGTSDFVAGPVENIIPVDVKV 126 Query: 139 PGCPPTPAATIHGFAVALGLLQQ 161 PGC P P I G AL + + Sbjct: 127 PGCAPRPEDIIAGIVKALPKVIE 149 >UniRef50_B5ZJ00 NADH ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZJ00_GLUDA Length = 166 Score = 158 bits (399), Expect = 2e-37, Method: Composition-based stats. Identities = 49/134 (36%), Positives = 73/134 (54%) Query: 25 HLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAV 84 L R V+ V+ GGC C +E+ A + GI V++PR A++LL TG + Sbjct: 16 RLPVTGARPLAVFHVETGGCEGCAMEVAALDGAAYGLPATGIAFVATPRLAEVLLVTGPL 75 Query: 85 TRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPT 144 TRAM A+ + P+ + V+ GAC + GG F + Y+V GG + +D+ +PGCPP+ Sbjct: 76 TRAMAPVLEAAWHAMPEPRALVAVGACAIDGGPFPENYAVLGGLEGRATLDMTVPGCPPS 135 Query: 145 PAATIHGFAVALGL 158 PAA + G A L Sbjct: 136 PAAILAGLARVLER 149 >UniRef50_D1B297 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B297_SULD5 Length = 138 Score = 158 bits (399), Expect = 2e-37, Method: Composition-based stats. Identities = 53/134 (39%), Positives = 74/134 (55%), Gaps = 1/134 (0%) Query: 33 SAYVYRVDCGGCNACEIEIFA-AITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMP 91 + YVYR++ G CN C++EI A + P F + G + P A+ILL TGA+T Sbjct: 4 TLYVYRINTGSCNGCDVEILASVLLPKFGFDALGCVYTNDPTLANILLVTGAITARSTPY 63 Query: 92 ALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHG 151 A + P KI V+ G C + GG+F D Y++ G DT V +DV I GCPP+P G Sbjct: 64 LQAALKQLPSKKIVVALGICPISGGVFRDSYAITGPLDTFVDVDVNISGCPPSPKEIAQG 123 Query: 152 FAVALGLLQQKIHA 165 A A L +++ HA Sbjct: 124 LAQACELWRERYHA 137 >UniRef50_Q978D5 Formate hydrogenlyase subunit 2 n=2 Tax=Thermoplasmatales RepID=Q978D5_THEVO Length = 222 Score = 157 bits (398), Expect = 3e-37, Method: Composition-based stats. Identities = 52/159 (32%), Positives = 82/159 (51%), Gaps = 7/159 (4%) Query: 14 TLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPR 73 T D++ +K+ RRS +V+ +D G C AC +E + +P +DA R GI +V++PR Sbjct: 70 TGDQRIFTIKKT-EDTFRRSFHVFPIDSGACGACNMEFLSIFSPQYDANRLGIFMVNTPR 128 Query: 74 HADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVP 133 +AD L+ G +T M+ RAYE+ P+ K+ ++ GAC V GGI + D Sbjct: 129 YADALIVMGVMTPGMKEALDRAYEAMPEPKLVIAMGACAVTGGIMGEN-----PLDR-EK 182 Query: 134 IDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPT 172 +V I GCPP+P I A+ ++ + R Sbjct: 183 YNVEIAGCPPSPYTLIAALNAAMKDKRKADYFESKRQEV 221 >UniRef50_B1ZSE7 NADH ubiquinone oxidoreductase 20 kDa subunit n=19 Tax=Bacteria RepID=B1ZSE7_OPITP Length = 285 Score = 157 bits (397), Expect = 3e-37, Method: Composition-based stats. Identities = 53/148 (35%), Positives = 78/148 (52%), Gaps = 7/148 (4%) Query: 1 MSPVLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFD 60 + + V LDE+ +KM RS + +V GG A E ++ T +D Sbjct: 128 LGAPGQEEVRLAAALDEKLRKM-------FGRSLRLRQVSAGGSGAEEADLNVLGTIGWD 180 Query: 61 AERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHD 120 RFGI+ V+SPRHAD L+ TG V++ M + + +E+ P KI ++ GA + GG+F Sbjct: 181 LGRFGIQFVASPRHADGLVVTGPVSKGMELALRKTWEAMPAPKIVIAVGAEAISGGVFAG 240 Query: 121 LYSVWGGSDTIVPIDVWIPGCPPTPAAT 148 V G D IVP+D++IPG PP P Sbjct: 241 HPQVRNGVDAIVPVDLYIPGWPPHPLTI 268 >UniRef50_A4YGN5 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Metallosphaera sedula DSM 5348 RepID=A4YGN5_METS5 Length = 203 Score = 156 bits (394), Expect = 7e-37, Method: Composition-based stats. Identities = 46/149 (30%), Positives = 69/149 (46%), Gaps = 8/149 (5%) Query: 13 ITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSP 72 E +RS Y+Y +D G C C +E+ +P +D RFGI ++P Sbjct: 63 SPTGETLTPRVERSDVTFKRSFYLYPLDAGSCGGCNLELRLISSPQYDMTRFGIFFTNTP 122 Query: 73 RHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIV 132 +HAD LL G + + M RAY+ P K+ + G C + GG+ + G Sbjct: 123 KHADALLIMGNLGKRMEEVIRRAYDVIPSPKLVILLGTCAISGGVTGIPPDIRG------ 176 Query: 133 PIDVWIPGCPPTPAATIHGFAVALGLLQQ 161 DV +PGCPPTPA+ + A G ++ Sbjct: 177 --DVIVPGCPPTPASILDALIKAKGGDRK 203 >UniRef50_D2PJN5 NADH ubiquinone oxidoreductase, 20 kDa subunit n=9 Tax=Sulfolobus RepID=D2PJN5_SULIS Length = 201 Score = 155 bits (391), Expect = 1e-36, Method: Composition-based stats. Identities = 42/129 (32%), Positives = 64/129 (49%), Gaps = 8/129 (6%) Query: 30 IRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMR 89 +RS Y+Y +D G C C +E+ +P +D RF I ++PRHAD L+ G +T M+ Sbjct: 81 FKRSFYLYPIDSGTCGGCNMELKLISSPEYDMTRFSIFFTNTPRHADALVVMGVMTEKMK 140 Query: 90 MPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATI 149 +AYE+ P+ K+ + GAC + GGI + + + V I GCPP P + Sbjct: 141 EVLKKAYEAMPEPKVVILLGACAISGGIIGEGV----PLEAV----VEISGCPPNPFTIL 192 Query: 150 HGFAVALGL 158 G Sbjct: 193 EALMKVKGK 201 >UniRef50_A8A9X3 NADH-quinone oxidoreductase, B subunit n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8A9X3_IGNH4 Length = 207 Score = 154 bits (388), Expect = 4e-36, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 13/155 (8%) Query: 17 EQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHAD 76 +++ +K L R S ++ + G C IE+ A D ER G+ ++PR D Sbjct: 15 KKSAPVKEALKWSRRNSLWLLHL---GIMCCAIEMMQAAFAFHDFERLGVLARATPRQVD 71 Query: 77 ILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPI-- 134 ++L G V R + R + P + + G C + GG + V G ++ Sbjct: 72 VILINGPVNRKLAERLRRLFMQTPGPRFVIVMGECAINGGPWWQSDYVLDGIHEVIESLP 131 Query: 135 -----DVWI---PGCPPTPAATIHGFAVALGLLQQ 161 DV + GCPP P + L+ + Sbjct: 132 EEYRKDVHVVNLAGCPPRPEGLLRAILKMEELINE 166 >UniRef50_A6DAC3 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DAC3_9PROT Length = 140 Score = 152 bits (384), Expect = 9e-36, Method: Composition-based stats. Identities = 42/130 (32%), Positives = 69/130 (53%), Gaps = 1/130 (0%) Query: 34 AYVYRVDCGGCNACEIEIFA-AITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPA 92 ++R++ G CN C++EI A ++ FD ++ G + + + ADI + TG VT Sbjct: 7 PKIFRINTGSCNGCDVEIAASVMSSRFDLQKLGCEYIETSEDADIFMITGPVTARSLPFL 66 Query: 93 LRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGF 152 ++ + +S G C V GIF D Y + G D+ V +DV + GCPP P A + G Sbjct: 67 KEVIKNHKKPYVVISLGTCSVTCGIFRDSYPILGPVDSYVNVDVNVAGCPPRPQAILEGV 126 Query: 153 AVALGLLQQK 162 A+ +L++K Sbjct: 127 KTAIDILKRK 136 >UniRef50_UPI0001B52F0A hydrogenase 4, Fe-S subunit n=1 Tax=Shigella sp. D9 RepID=UPI0001B52F0A Length = 173 Score = 149 bits (375), Expect = 1e-34, Method: Composition-based stats. Identities = 113/117 (96%), Positives = 115/117 (98%) Query: 1 MSPVLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFD 60 MSPVLTQHVSQPITLDEQTQKMK+HLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFD Sbjct: 1 MSPVLTQHVSQPITLDEQTQKMKQHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFD 60 Query: 61 AERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGI 117 AERFGIKV+SSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACG GGG Sbjct: 61 AERFGIKVISSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGAGGGF 117 >UniRef50_B5ICA0 NADH ubiquinone oxidoreductase, 20 Kd subunit family n=2 Tax=Aciduliprofundum boonei T469 RepID=B5ICA0_9EURY Length = 179 Score = 148 bits (373), Expect = 2e-34, Method: Composition-based stats. Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 12/145 (8%) Query: 16 DEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHA 75 +E+ K++ +S +++ +D G C++C EI +P +D R G PRHA Sbjct: 46 EERDDKIEVRRKIPFNKSVHIFVLDVGSCSSCNREISLLNSPQYDLHRLGFFFTPVPRHA 105 Query: 76 DILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPID 135 DILL G T M AYE P+ KI ++ GAC + I+ +D Sbjct: 106 DILLVIGEPTEKMIPVLKEAYEQMPEPKIVMTAGACAN------------EKIEKIIKVD 153 Query: 136 VWIPGCPPTPAATIHGFAVALGLLQ 160 + GCPP P A + + G Sbjct: 154 ARVSGCPPQPIAILKALLMLTGRWN 178 >UniRef50_A5FW77 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FW77_ACICJ Length = 164 Score = 147 bits (372), Expect = 2e-34, Method: Composition-based stats. Identities = 44/162 (27%), Positives = 69/162 (42%) Query: 9 VSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKV 68 + + + + ++ + RS V VD G C CEIEI A GI + Sbjct: 1 MDEDDPVRVLSARLAASGQALLGRSLAVRHVDAGSCGGCEIEIAACRRLRGGMAAHGIAM 60 Query: 69 VSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGS 128 V R ADILL TG TR + ++ + V+ G C + GG+F + +V GG Sbjct: 61 VEDLRAADILLVTGVATRNLAEAVRKSLAGMAPPRFVVAAGDCALDGGVFKGVPAVLGGV 120 Query: 129 DTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRD 170 ++P+D+ I GCPP P + G + ++ Sbjct: 121 QAVIPVDLLIAGCPPAPRQILAGLVALVEANAREPRRARVEP 162 >UniRef50_Q2WGH7 NADH dehydrogenase subunit K (Fragment) n=1 Tax=Selaginella uncinata RepID=Q2WGH7_SELUN Length = 215 Score = 146 bits (368), Expect = 7e-34, Method: Composition-based stats. Identities = 44/140 (31%), Positives = 66/140 (47%), Gaps = 2/140 (1%) Query: 43 GCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDH 102 G + C E I D++R G SSPR AD+++ G T M +R+YE P+ Sbjct: 65 GTSCCFTEFAPLIGSRSDSDRHGSVPRSSPRQADLIITAGTATTKMAPSLVRSYEQTPEP 124 Query: 103 KICVSYGACGVGGGIFH-DLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQ 161 K ++ GAC V GG+ D +S G D +P D + PG PP P A + + + Sbjct: 125 KHAIAMGACTVTGGMLSTDPHSTVRGVDKSIPADTYPPGRPPKPEAIVDATIKPREKVSR 184 Query: 162 KIHAVDYRDPTGVTMQPLWP 181 + + +YRD + L P Sbjct: 185 ETY-DNYRDKLREGNRFLTP 203 >UniRef50_B2N3C8 Hydrogenase-4 component I n=2 Tax=Enterobacteriaceae RepID=B2N3C8_ECOLX Length = 124 Score = 140 bits (354), Expect = 3e-32, Method: Composition-based stats. Identities = 119/119 (100%), Positives = 119/119 (100%) Query: 134 IDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIER 193 IDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIER Sbjct: 6 IDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIER 65 Query: 194 EARRLAGYRQGREICDRLLRHLSDDPTGNRVNTWLRDADDPRLNSIVQQLFRVLRGLHD 252 EARRLAGYRQGREICDRLLRHLSDDPTGNRVNTWLRDADDPRLNSIVQQLFRVLRGLHD Sbjct: 66 EARRLAGYRQGREICDRLLRHLSDDPTGNRVNTWLRDADDPRLNSIVQQLFRVLRGLHD 124 >UniRef50_Q0BPG7 Formate hydrogenlyase subunit 7 n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BPG7_GRABC Length = 174 Score = 139 bits (350), Expect = 8e-32, Method: Composition-based stats. Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 1/152 (0%) Query: 5 LTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERF 64 T + T+ + + + ++ + V+ GG +AC +E+ A R Sbjct: 17 DTASLPHAETVAALIARRRSSARPKLGQALSILHVESGGGSACLLELEALRAAPGLLARH 76 Query: 65 GIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSV 124 G++ V+SP HADILL TG + +A+E+ P + ++ G G G+ Y+ Sbjct: 77 GLRFVTSPLHADILLITGDGCHNLTSAIHQAWEAMPGPRWAIAVGDGAAGDGLLRGSYAS 136 Query: 125 WGGSDTIVPIDVWIPGCPPTPAATIHGFAVAL 156 G + +P D+ IPG PP + G + Sbjct: 137 TGNMEE-IPFDLVIPGSPPAADTILSGLRALV 167 >UniRef50_Q6L0U2 Formate hydrogenlyase subunit 7 n=1 Tax=Picrophilus torridus RepID=Q6L0U2_PICTO Length = 202 Score = 138 bits (348), Expect = 1e-31, Method: Composition-based stats. Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 8/135 (5%) Query: 22 MKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFT 81 + + + R+S +Y +D G C AC E+F+ P +D R+ I ++PRHAD ++ + Sbjct: 75 ISGSIDKKFRKSLNIYSIDSGTCGACNSELFSISIPEYDLTRYHIFFTNTPRHADAIILS 134 Query: 82 GAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGC 141 G +M+ A + P + GAC + GGI + + + IPGC Sbjct: 135 GIYNESMKDVIDNALGAMPKPGYLILLGACALSGGIIGSGHE--------IKAVLEIPGC 186 Query: 142 PPTPAATIHGFAVAL 156 PP P + G + Sbjct: 187 PPNPYTILKGLRRLM 201 >UniRef50_Q5FU78 Putative uncharacterized protein n=1 Tax=Gluconobacter oxydans RepID=Q5FU78_GLUOX Length = 161 Score = 136 bits (342), Expect = 7e-31, Method: Composition-based stats. Identities = 43/126 (34%), Positives = 60/126 (47%) Query: 30 IRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMR 89 R +Y ++ GGC C +EI + F E+ G VS P AD LL TGAVTR Sbjct: 33 RERPIGLYVLEAGGCEGCFMEIESLNGSAFALEQAGFVCVSDPADADWLLLTGAVTRVCA 92 Query: 90 MPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATI 149 R + + P + ++ GAC V GG F Y+ GG + + P+ I GCPP+P + Sbjct: 93 EMVDRVWRAMPPGRSLIAVGACAVDGGPFPAGYATLGGLEALTPVRRSIAGCPPSPDDIL 152 Query: 150 HGFAVA 155 Sbjct: 153 RALQEL 158 >UniRef50_A0LSU0 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LSU0_ACIC1 Length = 269 Score = 129 bits (325), Expect = 6e-29, Method: Composition-based stats. Identities = 52/146 (35%), Positives = 75/146 (51%), Gaps = 18/146 (12%) Query: 33 SAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPA 92 S +V VD G A E E+ A + PV+D R GI +SPRHAD+LL TG +R M P Sbjct: 124 SIHVRHVDAGSDGADEWEVLALLNPVYDIHRLGIFFTASPRHADVLLVTGVGSRGMAAPL 183 Query: 93 LRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIV------------------PI 134 R ++AP + ++ G + GG+ H Y+ GG ++ + Sbjct: 184 ARTLQAAPRPLVVIAAGTDAISGGLVHPTYATSGGIGDLIAATPDSAGATGAADGDPVRV 243 Query: 135 DVWIPGCPPTPAATIHGFAVALGLLQ 160 D+W+PG PPTP A +H +A+G LQ Sbjct: 244 DIWVPGSPPTPFALLHALLLAMGRLQ 269 >UniRef50_B0SCU6 Metal (Ni/Fe) hydrogenase, small subunit n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SCU6_LEPBA Length = 273 Score = 127 bits (319), Expect = 4e-28, Method: Composition-based stats. Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 10/155 (6%) Query: 4 VLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAER 63 + ++ TL E ++ + +R V GG N E E+ A+ VFD+ER Sbjct: 112 KMEKNSQSNFTLSENQRQFRDL---TKKRGFLYREVAAGGNNTVESELNASFNSVFDSER 168 Query: 64 FGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYS 123 GI+ V+SP+HAD ++F+G ++ M P A++ + + ++ G V GG+F Sbjct: 169 EGIRCVASPKHADTIVFSGPISEQMEGPLQTAWDVLSEPRALIACGTEAVSGGLFP---- 224 Query: 124 VWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGL 158 G P D++I G PP P + GF + +G Sbjct: 225 --KGKIPKEP-DLYISGDPPRPDVILQGFRLLIGR 256 >UniRef50_Q04P25 Metal (Ni/Fe) hydrogenase, small subunit n=4 Tax=Leptospira RepID=Q04P25_LEPBJ Length = 273 Score = 125 bits (313), Expect = 2e-27, Method: Composition-based stats. Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 7/150 (4%) Query: 11 QPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVS 70 + +T+++KR + V G N E EI A+ +FD+E I+VV+ Sbjct: 113 PDEKPEMETEEVKRFRKTTKKTGFQFREVAASGNNTTEAEINASFNALFDSEASKIRVVA 172 Query: 71 SPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDT 130 SP+HAD L+++G V M P A+E+ P K V+ G+ V GG+F Sbjct: 173 SPKHADALVYSGPVGPNMEEPLNTAWETMPSPKALVACGSEAVSGGLFKLGKLPKEP--- 229 Query: 131 IVPIDVWIPGCPPTPAATIHGFAVALGLLQ 160 D++I G PP P I F +G + Sbjct: 230 ----DLFIGGDPPRPDVIISAFRYLMGTRE 255 >UniRef50_B9SD17 NADH-ubiquinone oxidoreductase I subunit j, putative n=1 Tax=Ricinus communis RepID=B9SD17_RICCO Length = 188 Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats. Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 4/123 (3%) Query: 88 MRMPALRAYESAPDHKICVSYGACGVGGGIFH-DLYSVWGGSDTIVPIDVWIPGCPPTPA 146 M +R YE P+ K ++ GAC + GG+F D YS G D ++P+D ++ GCPP P Sbjct: 1 MAPSLVRLYEQIPEPKYVIAMGACTITGGMFSTDSYSTIRGVDKLIPVDAYLSGCPPKPE 60 Query: 147 ATIHGFAVALGLLQQKIHAVDYR-DPTGVTMQPLWPQIPPSQRIA--IEREARRLAGYRQ 203 A I L ++I+ R P + L + RI I++ Sbjct: 61 AVIDAITKLRKKLSREIYEDRIRSQPENRSSGGLLASVYHLTRIEYGIDQPEEVCIKVFA 120 Query: 204 GRE 206 R+ Sbjct: 121 PRK 123 >UniRef50_UPI000194DF39 PREDICTED: similar to NADH-ubiquinone oxidoreductase Fe-S protein 7 n=1 Tax=Taeniopygia guttata RepID=UPI000194DF39 Length = 183 Score = 120 bits (302), Expect = 3e-26, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 53/164 (32%), Gaps = 43/164 (26%) Query: 2 SPVLTQHVSQPITLDEQ-TQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFD 60 S V+ + P + E K+ + R S + G C +E+ P +D Sbjct: 55 SAVVPRKSYVPSSRGEYVIAKLDDLVNWARRSSLWPMTF---GLACCAVEMMHMAAPRYD 111 Query: 61 AERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHD 120 +RFG+ +SPR AD+++ G +T M + Sbjct: 112 MDRFGVVFRASPRQADVMIVAGTLTNKMAPALRKK------------------------- 146 Query: 121 LYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIH 164 G CPPT A ++G ++++ Sbjct: 147 -PPCRGR-------------CPPTAEALLYGILQLQRKIKREKR 176 >UniRef50_Q2H7B9 Putative uncharacterized protein n=1 Tax=Chaetomium globosum RepID=Q2H7B9_CHAGB Length = 189 Score = 120 bits (301), Expect = 4e-26, Method: Composition-based stats. Identities = 31/159 (19%), Positives = 52/159 (32%), Gaps = 48/159 (30%) Query: 10 SQPITLDEQ-TQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKV 68 +P ++ E + + + S + G C IE+ P +D +R GI Sbjct: 73 KRPNSVTEYALSTLDGLINWARQGSLWPMSF---GLACCAIEMMHLSMPRYDNDRQGIIF 129 Query: 69 VSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGS 128 +SPR +D+++ G G Sbjct: 130 RASPRQSDVMIVAG--------------------------------------------GV 145 Query: 129 DTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVD 167 D IVP+D+++PGCPPT A +G + Sbjct: 146 DRIVPVDIYVPGCPPTAEALQYGIFQLQKKMAAGQRFTR 184 >UniRef50_P80491 Coenzyme F420 hydrogenase subunit gamma n=27 Tax=Euryarchaeota RepID=FRHG_METBF Length = 259 Score = 119 bits (298), Expect = 9e-26, Method: Composition-based stats. Identities = 35/196 (17%), Positives = 60/196 (30%), Gaps = 26/196 (13%) Query: 32 RSAYVYRVDCGGCNACEIEIFA-------AITPVFDAERFGIKVVSSPRH---ADILLFT 81 + V GC C + + + D ++ RH D+ L Sbjct: 3 NKIKIGHVHMSGCTGCLVSLADNNLGLIKILDDYADL--VYCLTLADVRHIPEMDVALVE 60 Query: 82 GAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDL---------YSVWGGSDTIV 132 G+V E+ KI V+ G+C G I + + ++ Sbjct: 61 GSVCLQDHESVEDIKETRKKSKIVVALGSCACYGNITRFSRGGQHNQPQHESYLPIGDLI 120 Query: 133 PIDVWIPGCPPTPAAT----IHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQR 188 +DV+IPGCPP+P + + + G +QK A Y P + Sbjct: 121 DVDVYIPGCPPSPELIRNVAVMAYLLLEGNEEQKELAGKYLKPLMDLAKRGTSGCFCDLM 180 Query: 189 IAIEREARRLAGYRQG 204 + + G Sbjct: 181 YDVINQG-LCMGCGTC 195 >UniRef50_Q9H3K5 My017 protein n=3 Tax=Eukaryota RepID=Q9H3K5_HUMAN Length = 214 Score = 114 bits (285), Expect = 3e-24, Method: Composition-based stats. Identities = 29/179 (16%), Positives = 60/179 (33%), Gaps = 35/179 (19%) Query: 3 PVLTQHVSQPITLDEQT-QKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDA 61 P +P + E K+ + R S + G C +E+ P +D Sbjct: 47 PKARAVAPKPSSRGEYVVAKLDDLVNWARRSSLWPMTF---GLACCAVEMMHMAAPRYDM 103 Query: 62 ERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDL 121 +RFG+ +SPR +D+++ G +T M ++ + G L Sbjct: 104 DRFGVVFRASPRQSDVMIVAGTLTNKMAPALRKS-----PPR--------PDAGAALRGL 150 Query: 122 YSVWGGSDTIVPIDVWIPG----------------CPPTPAATIHGFAVALGLLQQKIH 164 + ++P +++ G P T A ++G ++++ Sbjct: 151 HGELRQRGRLLP--LFLLGGEGLRPHRARGHLHPRLPTTAEALLYGILQLQRKIKRERR 207 >UniRef50_B6YTV9 Coenzyme F420 hydrogenase gamma subunit n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YTV9_THEON Length = 225 Score = 107 bits (268), Expect = 3e-22, Method: Composition-based stats. Identities = 30/145 (20%), Positives = 50/145 (34%), Gaps = 13/145 (8%) Query: 33 SAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPR----HADILLFTGAVTRAM 88 V VD GGC C + I A + D I + D+ + TG Sbjct: 3 KLKVLHVDVGGCEGCNVSIIRAYPKLMDLIELDISYLRKDECKLDEYDVAIITGGACMNE 62 Query: 89 RMPALRAYESAPDHKICVSYGACGVGGGIFHDL---------YSVWGGSDTIVPIDVWIP 139 E V++G+C GI + + ++++ +D IP Sbjct: 63 PRILEELKEIREKAHTVVAFGSCATFSGILRFCRGGQEPRPDHRNFQPINSVIKVDYSIP 122 Query: 140 GCPPTPAATIHGFAVALGLLQQKIH 164 GCPPTP F + ++++ Sbjct: 123 GCPPTPQMLQSFFKFYINGDERRLR 147 >UniRef50_C5A2R7 Coenzyme F420 hydrogenase subunit gamma (FrhG) n=1 Tax=Thermococcus gammatolerans EJ3 RepID=C5A2R7_THEGJ Length = 229 Score = 103 bits (258), Expect = 5e-21, Method: Composition-based stats. Identities = 33/148 (22%), Positives = 52/148 (35%), Gaps = 19/148 (12%) Query: 33 SAYVYRVDCGGCNACEIEIFAAI---TPVFDAE----RFGIKVVSSPRHADILLFTGAVT 85 V VD GC C + I A D + R G D+ L TG Sbjct: 6 KLKVLHVDFAGCEGCNVSIIRAYPKLMNEIDLDISYLRDGSCQYG---EYDVALITGGAC 62 Query: 86 RAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDL---------YSVWGGSDTIVPIDV 136 E ++ V++G+C GGI + + ++++P+D Sbjct: 63 MNEPRILEELKEIREKARVVVAFGSCASLGGILRFARGGQEPRPDHRNFQPINSVIPVDY 122 Query: 137 WIPGCPPTPAATIHGFAVALGLLQQKIH 164 IPGCPPTP F + + ++ Sbjct: 123 SIPGCPPTPQMLQSFFKFFMAGNESRLR 150 >UniRef50_Q58591 F420-non-reducing hydrogenase vhu subunit G n=13 Tax=Methanococcales RepID=VHUG_METJA Length = 288 Score = 101 bits (252), Expect = 2e-20, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 63/220 (28%), Gaps = 51/220 (23%) Query: 33 SAYVYRVDCGGCNACEIEIFAAITPVFD----AERFGIKVVSSPRHA----DILLFTGAV 84 + V + GC+ C I + + + E +++ P+ D+ L G + Sbjct: 5 AVKVGMIQLCGCSGCHISLLDLHDKLLEVLPNLEIVYAPIIADPKEIPEGIDVFLVEGGI 64 Query: 85 TRAMRMPALRAYESAPDHKICVSYGACGVGGGI------------FHDLYSV-------- 124 +E KI +++G C GGI + +YS Sbjct: 65 RNEHDEHL--IHEIREKSKIVIAWGTCAAYGGIPGLGNLYKKEELLNYVYSTDSTENKGE 122 Query: 125 ------------WGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAV------ 166 + +D IPGCPPTP L + K+ Sbjct: 123 IPSEEIPPLEEYVKPIKDFIKVDYTIPGCPPTPKMIADAIIALLNGEEPKLPTKIVCDEC 182 Query: 167 --DYRDPTGVTMQPLWPQIPPSQRIAIEREARRLAGYRQG 204 + T + P +R E + G+ Sbjct: 183 PRKKENVFPETFKRTHEGRPDPERCLFE-QGYTCLGFATR 221 >UniRef50_UPI0000EC9F96 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (NADH-ubiquinone oxidoreductase 20 kDa subunit) (Complex I-20kD) (CI-20kD) (PSST subunit). n=1 Tax=Gallus gallus RepID=UPI0000EC9F96 Length = 176 Score = 100 bits (249), Expect = 4e-20, Method: Composition-based stats. Identities = 35/165 (21%), Positives = 64/165 (38%), Gaps = 6/165 (3%) Query: 2 SPVLTQHVSQPITLDEQT-QKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFD 60 S V+ + P + E K+ + RR+ + + + + Sbjct: 9 SAVVPKKSYVPTSRGEYIVTKLDDLINWARRRAC----FWTECFHCVASNMGYLLWKSHE 64 Query: 61 AERFG-IKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFH 119 FG I++ + + L + A P+ + +C GGG +H Sbjct: 65 RSSFGLIQLTAHMPMSTACLPARPHENHLSPHLTSAAGLGPELCFTNIFCSCANGGGYYH 124 Query: 120 DLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIH 164 YSV G D IVP+D+++PGCPPT A ++G ++++ Sbjct: 125 YSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKIKRERK 169 >UniRef50_A6UVU9 Coenzyme F420 hydrogenase n=2 Tax=Euryarchaeota RepID=A6UVU9_META3 Length = 227 Score = 100 bits (248), Expect = 7e-20, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 58/185 (31%), Gaps = 23/185 (12%) Query: 36 VYRVDCGGCNACEIEIFAAITPVFD----AERFGIKVVSSPRH---ADILLFTGAVTRAM 88 V V C C + + + D + + ++ R ADI+L G+V Sbjct: 4 VAHVQLSSCCGCLVSLTDTYEKLLDVLGAIDLVYSQTIADAREIPEADIILVEGSVCLDD 63 Query: 89 RMPALRAYESAPDHKICVSYGACGVGGGIFHDL---------YSVWGGSDTIVPIDVWIP 139 A + KI V+ GAC GGI +S + +V D+ IP Sbjct: 64 HHAMEIAQDVGKKAKILVALGACAATGGITRFCRGGQMSKPIHSSFSPITEVVKCDLAIP 123 Query: 140 GCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIEREARRLA 199 GCPP+P + A+ ++Y P + I Sbjct: 124 GCPPSPEIIVGLITAAIEG------DMEYLAPFSEFAKNNTEACGCDV-IEKVVNKSLCM 176 Query: 200 GYRQG 204 G Sbjct: 177 GCGCC 181 >UniRef50_C1GND6 NADH-ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Paracoccidioides brasiliensis Pb01 RepID=C1GND6_PARBA Length = 159 Score = 99.7 bits (247), Expect = 7e-20, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 3/83 (3%) Query: 16 DEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHA 75 +E+ + + + S + G C +E+ A P +D +R G +SPR + Sbjct: 36 EEKNGSIDKVVNWAREGSLWPLSF---GLACCNMEMMAVSMPRYDQDRLGTIFRASPRQS 92 Query: 76 DILLFTGAVTRAMRMPALRAYES 98 D+++ AVT+ Sbjct: 93 DVIIVADAVTKQDGPRLAVTRGQ 115 >UniRef50_C8X546 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X546_DESRD Length = 334 Score = 96.3 bits (238), Expect = 9e-19, Method: Composition-based stats. Identities = 50/246 (20%), Positives = 72/246 (29%), Gaps = 66/246 (26%) Query: 32 RSAYVYRVDCGGCNACEI----------EIFAAITPVF-----DAERFGIKVVSSPRHAD 76 R + G C C++ E+ A V+ D +R ++ + + D Sbjct: 3 RRMSIAMNWAGACGGCDVSLLDTQGKLLELTAVADVVYWPVALDYKRSDLEALPE-KSVD 61 Query: 77 ILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGI------------FHDLYS- 123 I LF G V A A ++ V+YGAC GGI F Y Sbjct: 62 IGLFNGVV--RTSEQAEDARRLRERCRVLVAYGACACHGGIPGLANQSDREEIFRVAYQD 119 Query: 124 ------------------------------VWGGSDTIVPIDVWIPGCPPTPAATIHGFA 153 +V +D ++PGCPPTP + Sbjct: 120 TVSTDNPDQIRPQQRTPVPGGEVTLPAFHDSVRALHQVVDVDYFLPGCPPTPERILD--- 176 Query: 154 VALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIEREARRLAGYRQGREICDRLLR 213 LG++Q D P G + P R R R YR + D Sbjct: 177 -LLGVVQAYNAGDDL-PPAGSILAPEATLCQECPRAETRRAGRMPRLYRPHEIVADPETC 234 Query: 214 HLSDDP 219 L Sbjct: 235 FLEQGV 240 >UniRef50_A5UWN9 NADH ubiquinone oxidoreductase, 20 kDa subunit n=2 Tax=Roseiflexus RepID=A5UWN9_ROSS1 Length = 127 Score = 93.2 bits (230), Expect = 6e-18, Method: Composition-based stats. Identities = 30/135 (22%), Positives = 50/135 (37%), Gaps = 10/135 (7%) Query: 34 AYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPAL 93 VYR + G C C++E+ AA+ I ++P AD+LL TG +T + + Sbjct: 2 IQVYRFNTGSCGGCDLEVIAALAAA-----ADIDWAATPHEADVLLLTGPLTTDTKKAFM 56 Query: 94 RAYESAPDHKICVSYGACGVGGGIF-HDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGF 152 + ++ G C + G F +V + +D GCPPTP + Sbjct: 57 ALLQELDHRAPIIAVGRCAIDGHPFGRGGVAVIPNLTVHLSLD----GCPPTPTQIVEAI 112 Query: 153 AVALGLLQQKIHAVD 167 + Sbjct: 113 RTIAMDREDGAAGER 127 >UniRef50_Q8TYW2 Coenzyme F420-reducing hydrogenase, gamma subunit n=2 Tax=Methanopyrus kandleri RepID=Q8TYW2_METKA Length = 305 Score = 92.4 bits (228), Expect = 1e-17, Method: Composition-based stats. Identities = 28/215 (13%), Positives = 57/215 (26%), Gaps = 52/215 (24%) Query: 36 VYRVDCGGCNACEIEIFAAITPVFDAERFGIKV---------VSSPRHADILLFTGAVTR 86 + C C + + + D I++ P H ++ + G++ Sbjct: 6 IATAQLSSCVGCHVSLLDLHEKLLDLLEDAIEIEYCYVLVDQKEIPEHVNVAVIEGSIRN 65 Query: 87 AMRMPALRAYESAPDHKICVSYGACGVGGGI----------------FHDLYSV------ 124 + A D I V+ G C GG+ F + + Sbjct: 66 EEDLEVAEELREAAD--IVVAVGTCACYGGVHGLANLYQLDDILEWVFKETPTTDDEGET 123 Query: 125 -----------WGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIH--------A 165 ++ +D +PGCPP P + L + ++ Sbjct: 124 PEEVVPELFGYVRPLPEVIDVDYMLPGCPPKPESIAEVITAILEDREPELPTTNLCEECP 183 Query: 166 VDYRDPTGVTMQPLWPQIPPSQRIAIEREARRLAG 200 + D ++ Q P + + G Sbjct: 184 REKEDIPIEEIKFRTGQGRPDPDKCLLEQGYPCMG 218 >UniRef50_B5YB68 NAD-reducing hydrogenase HoxS delta subunit n=2 Tax=Dictyoglomus RepID=B5YB68_DICT6 Length = 180 Score = 92.0 bits (227), Expect = 2e-17, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 58/179 (32%), Gaps = 45/179 (25%) Query: 33 SAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSP--------RHADILLFTGAV 84 V V C GC+ C + + + G+++ ++P DI + GAV Sbjct: 3 KIKVASVWCEGCSGCHMSFLDMDERLVELINKGLEINATPITDLKIPDEGTDIGIIEGAV 62 Query: 85 -TRAMRMPALRAYESAPDHKICVSYGACGVGGGI----------------FHDLYSVWGG 127 T E KI V+ G C V GGI + S G Sbjct: 63 ATDHHEEEVKMMRE---RCKIIVALGDCAVFGGIPTMRNYIPREELLERGYITTESTVDG 119 Query: 128 -----------------SDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYR 169 + ++ +D+++PGCPP+ A + L K+ + Sbjct: 120 KIPTSPEIGKHLPKTKAVNEVIKVDLYVPGCPPSADAIYYVLKEVLEGRIPKLEGELLK 178 >UniRef50_Q00393 Coenzyme F420 hydrogenase subunit gamma n=3 Tax=Methanococcus RepID=FRHG_METVO Length = 243 Score = 91.7 bits (226), Expect = 2e-17, Method: Composition-based stats. Identities = 31/209 (14%), Positives = 59/209 (28%), Gaps = 43/209 (20%) Query: 34 AYVYRVDCGGCNACEIEIFAAITPVFDAERFG------------------------IKVV 69 + + GC C I + + D G + Sbjct: 2 VKIAHIHMSGCTGCLISLTDTYEKLLDI--LGSVELVYALTLTGEKTEITETDDKILIER 59 Query: 70 SSPRHADILLFTGAVTRAMRMPALRAYESAPDHK-ICVSYGACGVGGGIFH--------- 119 P DI L G+V + + K V+ GAC GG+ Sbjct: 60 DIPGGIDIALVEGSVCLDDHHSMDDILTTRKNSKKSLVALGACAASGGVTRFRRVGQMSQ 119 Query: 120 DLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPL 179 ++ + ++ +D+ +PGCPP+ + + AL ++Y +P + Sbjct: 120 PSHASFVPIGDVIKVDLALPGCPPSTESIVKLLTAALEG------DMEYLEPFAEIAKYG 173 Query: 180 WPQIPPSQRIAIEREARRLAGYRQGREIC 208 + ++ G C Sbjct: 174 KDACGCDVIKEVINKS-LCMGCGTCAAAC 201 >UniRef50_Q21RP8 NADH ubiquinone oxidoreductase, 20 kDa subunit n=4 Tax=Proteobacteria RepID=Q21RP8_RHOFD Length = 188 Score = 91.3 bits (225), Expect = 3e-17, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 50/176 (28%), Gaps = 44/176 (25%) Query: 22 MKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSP----RH--- 74 M + R V V GC C + +FD I+ SP + Sbjct: 1 MMAPAMSPTPRKLKVATVSLAGCFGCHMSFLDIDERLFDLIEH-IEFDRSPLTDIKQVGA 59 Query: 75 ADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGG----------------IF 118 DI L G + E K V+ GAC + GG ++ Sbjct: 60 CDIGLIEGGLCN--AENVQVLREFRAHCKTLVAVGACAITGGLPAQRNHLDLGQLLTEVY 117 Query: 119 HDLY------------------SVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVAL 156 + +V +D +PGCPP+ A H + + Sbjct: 118 RSRPGLSAGGAIPNDPELPLLLNKVHPIREVVHVDYSLPGCPPSADAFWHFLSDLM 173 >UniRef50_A0LLU1 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LLU1_SYNFM Length = 184 Score = 90.9 bits (224), Expect = 3e-17, Method: Composition-based stats. Identities = 32/173 (18%), Positives = 49/173 (28%), Gaps = 56/173 (32%) Query: 32 RSAYVYRVDCGGCNACEIEIFAA--------------ITPVFDAERFGIKVVSSPRHADI 77 + GGC C + + +PV D + F P D+ Sbjct: 7 NKVRLATAWFGGCAGCHMSLLDLDERLIDVVGLVDIVYSPVADIKVF-------PEGVDV 59 Query: 78 LLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGG---------------------G 116 L GA A+E KI +++G C V G G Sbjct: 60 TLVEGACCN--DENVHLAHEVRERSKIVIAFGDCAVTGNVPSMRNRLDRDQMINSVYFEG 117 Query: 117 IFHDLYSVWGG------------SDTIVPIDVWIPGCPPTPAATIHGFAVALG 157 + G ++P+D+++PGCPP P L Sbjct: 118 PGKPPPTSVLGHFLPTLIPKVLPLHQVIPVDIFLPGCPPDPERIWAAIVALLK 170 >UniRef50_UPI0000E81815 PREDICTED: hypothetical protein n=1 Tax=Gallus gallus RepID=UPI0000E81815 Length = 187 Score = 86.6 bits (213), Expect = 7e-16, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 53/164 (32%), Gaps = 50/164 (30%) Query: 2 SPVLTQHVSQPITLDEQT-QKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFD 60 S V+ + P + E K+ + R S + + C Sbjct: 66 SAVVPKKSYVPTSRGEYIVTKLDDLINWARRTSLWPSMLAQQNC---------------- 109 Query: 61 AERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHD 120 + L + P+ C GGG +H Sbjct: 110 --------------------------HLHPALLGLSAAEPED-------GCANGGGYYHY 136 Query: 121 LYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIH 164 YSV G D IVP+D+++PGCPPT A ++G ++++ Sbjct: 137 SYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKIKRERK 180 >UniRef50_Q3M430 NADH ubiquinone oxidoreductase, 20 kDa subunit n=46 Tax=Bacteria RepID=Q3M430_ANAVT Length = 181 Score = 86.6 bits (213), Expect = 7e-16, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 49/165 (29%), Gaps = 45/165 (27%) Query: 34 AYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSP--------RHADILLFTGAVT 85 + V GGC+ C + + D VV SP D++L GA+ Sbjct: 4 LKLATVWLGGCSGCHMSFLDLDEWLIDLAAQ-ADVVFSPFADIKEYPEGVDVVLVEGAIA 62 Query: 86 RAMRMPALRAYESAPDHKICVSYGACGVGG------------------------------ 115 +I +S+G C V G Sbjct: 63 NE--EHLTTIKIVRERSQILISFGDCAVTGNVTALRNPLGSAEPVLQRCYIQAVDINPQI 120 Query: 116 ----GIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVAL 156 GI L +IVP+D+++PGCPP+ L Sbjct: 121 PQEPGIVPPLLDRVTPVHSIVPVDIYLPGCPPSATRIRAALEPLL 165 >UniRef50_A1SU83 Hydrogen dehydrogenase n=23 Tax=Proteobacteria RepID=A1SU83_PSYIN Length = 433 Score = 86.3 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 55/181 (30%), Gaps = 46/181 (25%) Query: 31 RRSAYVYRVDCGGCNACEIEIFAAITPVFDA-ERFGIKVVSSPR--------HADILLFT 81 ++ + GC C + + + ER +++ SP D+ L Sbjct: 255 KKKLKLATCSLAGCFGCHMSFLDMDERLIELLER--VELSRSPLNDIKTCAPDCDLGLIE 312 Query: 82 GAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGI--FHDLYSV--------------- 124 GAV + LR + KI ++ G+C + GG+ + V Sbjct: 313 GAVCNTENIAVLRHFRE--SCKIIIAVGSCAINGGVPSLRNNIDVKDCLDEAYLNGIGLV 370 Query: 125 ----------------WGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDY 168 ++ +D ++PGCPP A L + ++ Sbjct: 371 NPKVPIDKELPYLLEKVYPIHEVIKVDYFLPGCPPPADAFWKILNDLLDGKEPELPYDLL 430 Query: 169 R 169 Sbjct: 431 H 431 >UniRef50_Q8TXX1 Coenzyme F420-reducing hydrogenase, gamma subunit n=1 Tax=Methanopyrus kandleri RepID=Q8TXX1_METKA Length = 238 Score = 85.5 bits (210), Expect = 1e-15, Method: Composition-based stats. Identities = 31/141 (21%), Positives = 43/141 (30%), Gaps = 14/141 (9%) Query: 75 ADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFH--------DLYS-VW 125 ADIL GAV A + E+A VS G+C GG D Y Sbjct: 43 ADILFVEGAVDFADAETLEKLEEAASAVSTVVSLGSCAATGGFERHVIGMRDPDRYHFTV 102 Query: 126 GGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHA-----VDYRDPTGVTMQPLW 180 + V D I GCPPT + ++ D+ T P+ Sbjct: 103 FPAAKFVETDYAINGCPPTTDVIASFLRALEEENEDELRPYEVLSGDFHGLTPELSAPVT 162 Query: 181 PQIPPSQRIAIEREARRLAGY 201 P + + + G Sbjct: 163 GPTVPVEDVLLTSNKDLCLGC 183 >UniRef50_B8G3U7 NADH ubiquinone oxidoreductase 20 kDa subunit n=6 Tax=Bacteria RepID=B8G3U7_CHLAD Length = 177 Score = 85.1 bits (209), Expect = 2e-15, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 56/179 (31%), Gaps = 57/179 (31%) Query: 34 AYVYRVDCGGCNACEIEIFAA--------------ITPVFDAERFGIKVVSSPRHADILL 79 + + GGC+ C + + +P+ D +RF P H D+ L Sbjct: 4 IRIATIWLGGCSGCHMSLLDLDEWLIELAAQADLVYSPIADVKRF-------PSHVDVTL 56 Query: 80 FTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGG------------------------ 115 GA+ A+ + + KI VS+G C V G Sbjct: 57 IEGAIANN--EHLELAHIARRNSKIIVSFGDCAVSGNVTALRNPLGSPEQLLQQVYIEHS 114 Query: 116 ----------GIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIH 164 GI L ++P+D ++ GCPP+ L + ++ Sbjct: 115 DPRGKIPHEPGIVPVLLDKVMPVHQVIPVDYYLSGCPPSAPRIRALLEALLTGRKPEVD 173 >UniRef50_Q2LYD8 Nickel-dependent hydrogenase, small chain n=2 Tax=Bacteria RepID=Q2LYD8_SYNAS Length = 253 Score = 84.7 bits (208), Expect = 3e-15, Method: Composition-based stats. Identities = 32/210 (15%), Positives = 64/210 (30%), Gaps = 52/210 (24%) Query: 22 MKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHA------ 75 M+R L++ V D C C++++ + D G V R Sbjct: 1 MERMLMK-----PKVAFFDFACCEGCQLQVANLGEALLDI--LGAIDVVEFREVMSEKWD 53 Query: 76 ---DILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGI--------------- 117 D+ + G++T R + + ++YG+C GG+ Sbjct: 54 KNYDVAIVEGSITDEHAE--QRIRKIRDRSAVLIAYGSCATIGGVNGMKNSFVLDEIRQS 111 Query: 118 -FHDLYSVW-----GGSDTIVPIDVWIPGCPP-TPAATIHGFAVALGLLQQKIHAVDYRD 170 + Y ++ +V +D +I GCP P + + Sbjct: 112 VYGKDYQLFDSKKTRPIHQVVKVDYFINGCPVYHPEVI------------EVLKCALRGV 159 Query: 171 PTGVTMQPLWPQIPPSQRIAIEREARRLAG 200 P V P+ + ++ + + G Sbjct: 160 PYAVPDNPVCSECKLNENVCMYDRGVACLG 189 >UniRef50_B7QG38 NADH-plastoquinone oxidoreductase, putative n=1 Tax=Ixodes scapularis RepID=B7QG38_IXOSC Length = 162 Score = 82.8 bits (203), Expect = 9e-15, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 30/48 (62%) Query: 93 LRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPG 140 + Y+ + + +S G+C GGG +H YSV G D I+P+D+++PG Sbjct: 78 RKVYDQMLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPG 125 >UniRef50_Q58136 Uncharacterized protein MJ0726 n=3 Tax=Methanocaldococcus RepID=Y726_METJA Length = 216 Score = 82.4 bits (202), Expect = 1e-14, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 46/140 (32%), Gaps = 8/140 (5%) Query: 73 RHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGG----- 127 + DI+L GAV + E + K+ ++ G+C V GG L + G Sbjct: 23 KEKDIVLVGGAVNLDDEEEVKKIMEIRKNSKVLIAVGSCAVSGGFQRMLIGLENGFPQRF 82 Query: 128 --SDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTM-QPLWPQIP 184 +V +D I GCPP + ++ + + P V +P+ Sbjct: 83 VRIGDVVKVDYAIIGCPPDEEEVERIVKAVIEKDKEIVDSYLILKPYEVIAGKPIIDAYM 142 Query: 185 PSQRIAIEREARRLAGYRQG 204 + + G Sbjct: 143 KVNDVLLTSNKELCLGCDDK 162 >UniRef50_Q6A6I9 NADH dehydrogenase subunit n=2 Tax=Propionibacterium acnes RepID=Q6A6I9_PROAC Length = 132 Score = 80.1 bits (196), Expect = 6e-14, Method: Composition-based stats. Identities = 34/132 (25%), Positives = 47/132 (35%), Gaps = 17/132 (12%) Query: 23 KRHLLQDIRRSAYVYRVDCGGCNACEIEIFAA---ITPVFDAERFGIKVVSSPRHADILL 79 + + S YV + C +E AA PV + G + ++L Sbjct: 1 MKFIDWFADGSVYVVDLA---LACCGVESGAAVLANAPVREEIPDGAPI--------VVL 49 Query: 80 FTGAVTRAMRMPALRAYESAP--DHKICVSYGACGVGGGIFHDLYSVWGGS-DTIVPIDV 136 +G VT + V++GAC GG + D V G D V D Sbjct: 50 VSGTVTTGLAPVVSDTVHELKRNHPVDVVAFGACACAGGPYWDSAGVVAGLPDAGVDADH 109 Query: 137 WIPGCPPTPAAT 148 WIPGCPP P Sbjct: 110 WIPGCPPGPETL 121 >UniRef50_A5UM99 Coenzyme F420-reducing hydrogenase, gamma subunit, FrhG n=3 Tax=Methanobacteriaceae RepID=A5UM99_METS3 Length = 276 Score = 78.2 bits (191), Expect = 2e-13, Method: Composition-based stats. Identities = 26/175 (14%), Positives = 51/175 (29%), Gaps = 29/175 (16%) Query: 6 TQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDA---- 61 Q + ++E + + + + GC + + T +D Sbjct: 20 KQKIESAPEVEETAAPVAETKQETATNKPRIGYIHLSGCTGDGMSL----TENYDILDVV 75 Query: 62 ------ERFGIKVVS--SPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGV 113 +G +V D+ L G+V E+ + ++G+C + Sbjct: 76 LTEMVDIVYGQTLVDLWEMPEMDLCLIEGSVCLQDEHSVHELLEAREKSALICAFGSCAL 135 Query: 114 GGGIFHDLYSVWG-----------GSDTIVPIDVWIPGCPPTPAATIHGFAVALG 157 G Y+ G ++V +DV +PGCP P Sbjct: 136 NGCFT--TYARGGQQAQPKHESFLPISSLVKVDVALPGCPVAPEMIAKTVVALCN 188 >UniRef50_C1DUT4 Putative [NiFe] hydrogenase, delta subunit n=1 Tax=Sulfurihydrogenibium azorense Az-Fu1 RepID=C1DUT4_SULAA Length = 249 Score = 77.8 bits (190), Expect = 4e-13, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 46/145 (31%), Gaps = 29/145 (20%) Query: 39 VDCGGCNACEIEIFAAITPVFDAERFGIKV------VSSPRHADILLFTGAVTRAMRMPA 92 C+ C++ + + E F I V++ + D G+V+ Sbjct: 6 FKFSSCDGCQLSFINLSGELAELENFSIDYFLEGQSVNNYEYFDFSFVEGSVS--TTEEI 63 Query: 93 LRAYESAPDHKICVSYGACGVGGGI-----FHD------LYSVWG----------GSDTI 131 R + K+ V GAC V GG+ F + +Y+ + Sbjct: 64 ERIKDIRERSKVLVGIGACAVSGGVQSIRNFRNIDDIKTVYNTVDITKNVLENALPISQV 123 Query: 132 VPIDVWIPGCPPTPAATIHGFAVAL 156 V +D I GCP + L Sbjct: 124 VKVDFEIRGCPVSTDVVKDFINSIL 148 >UniRef50_UPI0001C420D3 coenzyme F420 hydrogenase gamma subunit FrhG n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C420D3 Length = 319 Score = 77.4 bits (189), Expect = 4e-13, Method: Composition-based stats. Identities = 22/142 (15%), Positives = 42/142 (29%), Gaps = 17/142 (11%) Query: 33 SAYVYRVDCGGCNACEIEIFA----AITPVFDA--ERFGIKVVS--SPRHADILLFTGAV 84 + + GC + + T + D +G +V D+ L G+V Sbjct: 90 KPKIGYIHMSGCTGDGMSLTENYDILSTLLTDMVDIVYGTTLVDLWEMPEMDLALVEGSV 149 Query: 85 TRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDL---------YSVWGGSDTIVPID 135 E + ++G+C + G + + +V +D Sbjct: 150 CLQDEHSVKELMEVREKAGLVCAFGSCAMTGCFTRYARGGQLAQPKHESFVPISDLVKVD 209 Query: 136 VWIPGCPPTPAATIHGFAVALG 157 IPGCP +P + Sbjct: 210 CAIPGCPASPEIIAKVVVALIN 231 >UniRef50_C0QEJ1 HynB n=4 Tax=Deltaproteobacteria RepID=C0QEJ1_DESAH Length = 330 Score = 75.5 bits (184), Expect = 2e-12, Method: Composition-based stats. Identities = 34/223 (15%), Positives = 59/223 (26%), Gaps = 36/223 (16%) Query: 3 PVLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIF------AAIT 56 V+T + + Q R S G C C A I Sbjct: 44 TVMTASMGLSASCVGQVASSIEKAASGTRPSVVWLHF--GECTGCSEAFLRTPNVGAIIL 101 Query: 57 PVFDAERFGIKVVSSPRHAD--------------ILLFTGAVTRAMRMP---------AL 93 E + +S A+ I + G++ A Sbjct: 102 ETISVEYHETIMAASGHQAEKSLEQAIKTHKGKFICVVEGSIATAYNGAYGKVGGRTFLE 161 Query: 94 RAYESAPDHKICVSYGACGVGGGI--FHDLYSVWGGSDTIVPID-VWIPGCPPTPAATIH 150 A + P + ++ G C GGI + G + + + I GCPP P + Sbjct: 162 IANDVIPKAAVTIALGTCAAYGGIPSAAPNPGGYKGVKDAIGVATINISGCPPNPLNLLS 221 Query: 151 GFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIER 193 L + I + P + + + P + + Sbjct: 222 TIVKYLNK--ETIELDELGRPLFAYAETVHDRCPRLKHFENDE 262 >UniRef50_Q0W6J6 Coenzyme F420-non-reducing hydrogenase (Methyl viologen-reducing hydrogenase), gamma subunit n=2 Tax=Euryarchaeota RepID=Q0W6J6_UNCMA Length = 305 Score = 75.1 bits (183), Expect = 2e-12, Method: Composition-based stats. Identities = 37/218 (16%), Positives = 62/218 (28%), Gaps = 53/218 (24%) Query: 33 SAYVYRVDCGGCNACEIEIFA---AITPVFDAERFGIKVV-----SSPRHADILLFTGAV 84 V G C CEI + A+ P+ D F V P+ A + + +G V Sbjct: 3 KVKVAETWIGACAGCEISVLDTHEALLPILDKIEFVYIPVLMDTKHIPK-ATVGIVSGCV 61 Query: 85 TRAMRMPALRAYESAPDHKICVSYGACGVGGG---------------------------- 116 + E + I V+ G+C GG Sbjct: 62 RNSDN--LHELLEMRKNVDILVALGSCACFGGTPGMANLYTPEQLLEEVYVTTKSTKNEI 119 Query: 117 ---IFHDLYSVW----GGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHA---- 165 + D V +D IPGC P PA LG + K+ Sbjct: 120 QRHPYMDGLPTLLPDAKPLSDYVKVDAMIPGCGPRPAMIAQAILSLLGAAEYKLSTKSVC 179 Query: 166 -VDYRDPTGVTMQPLWPQIP--PSQRIAIEREARRLAG 200 R+ + ++ + ++ + + +G Sbjct: 180 DECAREKSERNLKKILRPFEGTIDEKKCLFEQGYLCSG 217 >UniRef50_B1L5Y5 Coenzyme F420-reducing hydrogenase, gamma subunit n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L5Y5_KORCO Length = 319 Score = 73.9 bits (180), Expect = 4e-12, Method: Composition-based stats. Identities = 35/228 (15%), Positives = 62/228 (27%), Gaps = 66/228 (28%) Query: 35 YVYRVDCGGCNACEIEIFAAITPVFDA-ERFGIKVVSSPRHA-------------DILLF 80 + C C CE +FD E I + D+ + Sbjct: 5 KIAFYWCASCGGCEEAQVDLADKLFDLIEAADIVLWPVAMDFKKEDVEKVGDGSIDVAII 64 Query: 81 TGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGI----------------FHDLYSV 124 G + + ++ K+ ++YG+C GGI + + +V Sbjct: 65 NGGIRTSEHEEMVKLLRR--KSKLVIAYGSCAHMGGIPALANAYTRESILKYVYEEAPTV 122 Query: 125 WGG---------------------------SDTIVPIDVWIPGCPPTPA-------ATIH 150 D ++ +D +IPGCPPTP + + Sbjct: 123 TNPEGKRPKTRVSVDGMDFELPEFLEYLDPLDAVIDVDYYIPGCPPTPEITWEAVSSILS 182 Query: 151 GFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIEREARRL 198 G G + A+ Y P T + E + + Sbjct: 183 GNLPPKGHVFGSDRALCYECPLNETKPEKVTIDTIKRVHQTELDPNKC 230 >UniRef50_A0LP54 NADH ubiquinone oxidoreductase, 20 kDa subunit n=7 Tax=Deltaproteobacteria RepID=A0LP54_SYNFM Length = 324 Score = 73.9 bits (180), Expect = 4e-12, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 49/169 (28%), Gaps = 54/169 (31%) Query: 40 DCGGCNACEIEIFAAITP---------------VFDAERFGIK----VVSSPRHADILLF 80 C CEI + +FD + FG + P ADI + Sbjct: 9 SLSSCAGCEISMLNMGGLFLELLKEIRIVHMPLLFDHKYFGQAGEENFIGIP-EADIGIV 67 Query: 81 TGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGI------------FHDLYSVWG-- 126 +G + A + +I V+ G C GGI F Y Sbjct: 68 SGGIRNE--EQLEVALKVRAQCRILVALGTCATHGGIPALMNRYSDEDLFRRYYRTSETT 125 Query: 127 ----GSDTIVP--------------IDVWIPGCPPTPAATIHGFAVALG 157 + +VP +DV++ GCPP P F L Sbjct: 126 EAAAPPNEVVPRFLDRTYALDEKARVDVYMAGCPPHPDYLGAMFRTLLD 174 >UniRef50_B9L8N0 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Nautilia profundicola AmH RepID=B9L8N0_NAUPA Length = 288 Score = 73.5 bits (179), Expect = 6e-12, Method: Composition-based stats. Identities = 33/194 (17%), Positives = 57/194 (29%), Gaps = 25/194 (12%) Query: 33 SAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVS-------SPRHADILLFTGAVT 85 V +D C C E+ + + D+L+ GA+ Sbjct: 4 KLNVIWIDAVTCYGCTHSFLNYKEISSLFEKVNFEYHPLFLSNDLEIKQCDLLIVEGAL- 62 Query: 86 RAMRMPALRAYESAP-----DHKICVSYGACGVGGGIFHDL--YSVWGGSDTIVPID--V 136 + + K ++ G C V GG+F + Y+ D + Sbjct: 63 KNNYPRLGYSLNELISKLFFKAKKVLALGTCAVYGGMFGEGLMYNKEQKGHYYKCRDKII 122 Query: 137 WIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIEREAR 196 +PGCPP P F + + +KI D P + ++ + +A Sbjct: 123 NLPGCPPHPDWI--AFVLDMISENKKIALDDLNRPKDIFAYTSHMGCTRNEYFEWKIDAE 180 Query: 197 R------LAGYRQG 204 Y QG Sbjct: 181 NFGTKEGCLFYFQG 194 >UniRef50_C6A155 NiFe hydrogenase I, subunit delta n=1 Tax=Thermococcus sibiricus MM 739 RepID=C6A155_THESM Length = 267 Score = 73.5 bits (179), Expect = 6e-12, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 47/152 (30%), Gaps = 30/152 (19%) Query: 33 SAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKV-----VSSP--RHADILLFTGAVT 85 + C C+++ + ++ I+ S + DI G+V+ Sbjct: 10 KVKIGFYALTSCYGCQLQFAMMDEVLQLLDKANIECWFMLERGSDEDKEVDIAFIEGSVS 69 Query: 86 RAMRMPALRAYESAPDHKICVSYGACGVGGGI------------FHDLYS---------V 124 + KI ++ G+C V GG+ + +Y + Sbjct: 70 TQ--EEVELVKKIREKAKIVIAVGSCAVHGGVQSWDKDKEFNELWKTVYGDAHVKFEPKM 127 Query: 125 WGGSDTIVPIDVWIPGCPPTPAATIHGFAVAL 156 + + +D + GCPP ++ L Sbjct: 128 AEPVEKYIKVDYKLYGCPPEKKDFLYALGTLL 159 >UniRef50_A9B2V8 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B2V8_HERA2 Length = 124 Score = 73.2 bits (178), Expect = 7e-12, Method: Composition-based stats. Identities = 30/132 (22%), Positives = 48/132 (36%), Gaps = 13/132 (9%) Query: 34 AYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPAL 93 VY ++ G IE+ + + ++P HADI + TG + +R Sbjct: 2 IAVYHLNAGSTG---IEVRILAEAI--RSARNLTWAATPAHADIFVLTGPIPLLLRPALS 56 Query: 94 RAY-ESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTI--VPIDVWIPGCPPTPAATIH 150 + + D ++ G + G F GG + + + I G PPT AA Sbjct: 57 NVWRDFIADRAPLIALGRASIDGHPFG-----RGGLAELPEIQVAAKIDGDPPTVAAIQA 111 Query: 151 GFAVALGLLQQK 162 G AL K Sbjct: 112 GIVQALNARTAK 123 >UniRef50_D2REQ3 NADH ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=cellular organisms RepID=D2REQ3_ARCPR Length = 321 Score = 73.2 bits (178), Expect = 8e-12, Method: Composition-based stats. Identities = 38/244 (15%), Positives = 68/244 (27%), Gaps = 79/244 (32%) Query: 33 SAYVYRVDCGGCNACEIEIFAAITPVFD-AERFGIKV-------------VSSPRHA-DI 77 + + + GGC C++ + + D E I + P + D+ Sbjct: 2 ALKLAYLLVGGCGGCDMAVVDLSEKLVDALEHLEIVFWAPTVADVKYKDLEAMPDQSIDL 61 Query: 78 LLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGI------------FHDLY--- 122 L +G V ++ KI V++G C GGI F + Y Sbjct: 62 GLISGMVRNKENEHLVKVMRQ--KCKIIVAFGICAALGGIPGMANMHKNEELFENAYIKS 119 Query: 123 ----------------------------SVWGGSDTIVPIDVWIPGCPPT-------PAA 147 D ++ +D ++ GCPP A Sbjct: 120 PSTDNPNNVIPQPVSKEGEFELTLPEFLDRVKPIDEVIEVDYYVGGCPPHHDHVAKVVEA 179 Query: 148 TIHGFAVALGLL---QQKIHAVDYRDPT--------GVTMQPLWPQIPPSQRIAIEREAR 196 I G G + + V R+P ++ + IP + + + Sbjct: 180 VITGNLPPKGSWITNGKAVCDVCARNPAVKGKTREFVKEVKRMHEGIPDEEECLL-NQGY 238 Query: 197 RLAG 200 G Sbjct: 239 LCLG 242 >UniRef50_D2BHA4 Nickel-dependent hydrogenase, group 3, small subunit n=5 Tax=Dehalococcoides RepID=D2BHA4_DEHSV Length = 312 Score = 72.8 bits (177), Expect = 9e-12, Method: Composition-based stats. Identities = 37/166 (22%), Positives = 52/166 (31%), Gaps = 57/166 (34%) Query: 44 CNACEIEIFAAITPVFDA--------------------ERFGIKVVSSPRHADILLFTGA 83 C CE+ I P+ D + GIK P AD+ + TG Sbjct: 12 CGGCELSILDIGEPLLDVLPNLKIVHMPVLMDHKLLGQKGDGIKY-EIP-EADLGIITGG 69 Query: 84 VTRAMRMPALRAYESAPDHKICVSYGACGVGGGI------------FHDLYSVWGG---- 127 + A E K+ V+ G C GGI ++S G Sbjct: 70 IRNEENREL--ALEMRKKCKLIVALGTCACFGGIPALANLSTTEDMLKQVFSKEKGTDPA 127 Query: 128 -----------------SDTIVPIDVWIPGCPPTPAATIHGFAVAL 156 D I+ +D+ +PGCPPTPA + L Sbjct: 128 SPPGDKSLPKMLDRVYAVDEIITVDIHLPGCPPTPAHIVELLTAVL 173 >UniRef50_Q59113 Hydrogenase small beta subunit n=2 Tax=Bacteria RepID=Q59113_9BACT Length = 179 Score = 72.8 bits (177), Expect = 9e-12, Method: Composition-based stats. Identities = 30/173 (17%), Positives = 52/173 (30%), Gaps = 44/173 (25%) Query: 35 YVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSP-------RHADILLFTGAVTRA 87 V C C + + D + ++++ SP + D+ + +G + Sbjct: 5 KVATFWLEACAGCHMSFLDLDERLIDLFQ-NVEILFSPIVDAKDIPNIDVGVLSGGLGN- 62 Query: 88 MRMPALRAYESAPDHKICVSYGACGVGGGI------------FHDLY------------- 122 A + K V++G C V GGI + Y Sbjct: 63 -VEEVELAKKMRERCKYLVAWGDCAVFGGINCMRNFIPKDVVLREGYIETASTVNPQGIV 121 Query: 123 ---------SVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAV 166 D V +DV++PGCPP + F L K+ + Sbjct: 122 PSEDIPELLPRALPIDYEVKVDVYVPGCPPDADTIYYVFKELLAGRVPKVPSE 174 >UniRef50_B4SFA2 NADH ubiquinone oxidoreductase 20 kDa subunit n=10 Tax=Chlorobiaceae RepID=B4SFA2_PELPB Length = 258 Score = 72.8 bits (177), Expect = 9e-12, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 48/136 (35%), Gaps = 31/136 (22%) Query: 34 AYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRH--------ADILLFTGAVT 85 + D C C++++ + + D + + + R DI L G+++ Sbjct: 15 LKIASFDFTCCEGCQLQLANRESTLADF--LNLLDIRNFRELSSEQHDDYDIALIEGSIS 72 Query: 86 RAMRMPALRAYESAPDHKICVSYGACGVGGGI--FHDLYSVWGGSD-------------- 129 R R + KI V++G C GGI + + D Sbjct: 73 RQDE--VERLLKIRQQAKILVAFGTCACFGGINSLKNRFPAREMIDAVYPGMPIETLPVR 130 Query: 130 ---TIVPIDVWIPGCP 142 +V +D+ IPGCP Sbjct: 131 KISDVVKVDLSIPGCP 146 >UniRef50_Q50782 F420-non-reducing hydrogenase subunit G n=15 Tax=Euryarchaeota RepID=MVHG_METTH Length = 308 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 29/200 (14%), Positives = 53/200 (26%), Gaps = 47/200 (23%) Query: 33 SAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSP----------RHADILLFTG 82 + + GGC+ C + I + D SP D+++ G Sbjct: 4 KIKIGTMWLGGCSGCHLSIADFHEKIIDVMEH-ADFEFSPVLMDTKYDEIPELDVVIIEG 62 Query: 83 AVTRAMRMPALRAYESAPDHKICVSYGACGVGGGI----------------FHDLYSV-- 124 + E K +SYG C V GGI + + + Sbjct: 63 GIVNDENREFAE--ELREKAKFVISYGTCAVYGGIPGLRNLWDKDEVIEEAYINSITTPN 120 Query: 125 ----------------WGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDY 168 ++ +D +PGCPP L + ++ + Sbjct: 121 EEGVIPSEDVPHLEGRVKPLGEVIDVDFEVPGCPPRSDVAAEAVMALLTGEEIELPETNL 180 Query: 169 RDPTGVTMQPLWPQIPPSQR 188 + P + +R Sbjct: 181 CEVCPREKPPEGLAMDFIKR 200 >UniRef50_C7J5D7 Os07g0116900 protein n=3 Tax=Oryza sativa RepID=C7J5D7_ORYSJ Length = 114 Score = 71.2 bits (173), Expect = 3e-11, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 23/52 (44%) Query: 44 CNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRA 95 C +E+ A +D +RF + SPR +D ++ G +T M + Sbjct: 58 LAYCAVEMMHAGASCYDFDRFRVIFRPSPRQSDCMIIVGTLTNKMGPALGKT 109 >UniRef50_O28898 Methylviologen-reducing hydrogenase, subunit gamma (VhuG) n=1 Tax=Archaeoglobus fulgidus RepID=O28898_ARCFU Length = 293 Score = 70.9 bits (172), Expect = 4e-11, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 46/160 (28%), Gaps = 42/160 (26%) Query: 36 VYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVS----------SPRHADILLFTGAVT 85 V GC+ C + + + D R + + P D G + Sbjct: 4 VAFYIAHGCSGCTMSMLDLGERMNDF-RMRVAWAAPTLGDGKYDRIP-EVDYAFIEGGIG 61 Query: 86 RAMRMPALRAYESAPDHKICVSYGACGVGGGI----------------FHDLYSVWG--- 126 + E + V++G C GGI F S G Sbjct: 62 LS--EHVEIVRELREKSETLVAFGICASCGGIMGLANLHSKEEILEDVFGSAKSSVGDLR 119 Query: 127 ---------GSDTIVPIDVWIPGCPPTPAATIHGFAVALG 157 D++V +D +I GCPPTP + F Sbjct: 120 IPEMLEFVKPLDSVVEVDCYIGGCPPTPEQIYNAFKAIFE 159 >UniRef50_C6YT65 Predicted protein n=2 Tax=Francisella philomiragia RepID=C6YT65_9GAMM Length = 268 Score = 70.5 bits (171), Expect = 5e-11, Method: Composition-based stats. Identities = 28/174 (16%), Positives = 50/174 (28%), Gaps = 38/174 (21%) Query: 24 RHLLQDIRRSAYVYRVDCGGCNACEIEIFA------AITPVFDAERFG-IKVVSSPRHAD 76 + L+++ + C+ C++ + + + D F + D Sbjct: 4 QDKLKNLAPRPKIAVHKFSSCDGCQLALINDAVSLLTLAEMVDIVHFAEAGPLDEFADVD 63 Query: 77 ILLFTGAV-TRAMRMPALRAYESAPDHKICVSYGACGVGGGI------------------ 117 I G+V T + E K ++ GAC V GGI Sbjct: 64 IAFIEGSVNTHHDIPRLQKIRE---KAKYVIAIGACAVAGGIQALRNYTNAAELLEWQKA 120 Query: 118 ---------FHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQK 162 + S V +D I GCP T + L ++ + Sbjct: 121 VYPQDTDVIIKEDLSTAKAIKEYVNVDFEISGCPITTEQILKAIRQLLFGVEPE 174 >UniRef50_C7MNR7 Hydrogenase (NiFe) small subunit HydA n=4 Tax=Coriobacteriaceae RepID=C7MNR7_CRYCD Length = 439 Score = 70.1 bits (170), Expect = 6e-11, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 53/156 (33%), Gaps = 31/156 (19%) Query: 77 ILLFTGAVTRAM---------RMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWG- 126 IL++ GAV + E+AP V+ G+C V GG + G Sbjct: 125 ILIYEGAVLEKWGGEALRVAGKPGTEHLLEAAPSANAVVALGSCAVNGGWMGANPNSAGA 184 Query: 127 -GSDTI-------VPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYR-DPTGVTMQ 177 G + VP+ V IPGCP P + + + K+ A+DY P + + Sbjct: 185 VGVEKFLKESGINVPV-VNIPGCPANPEWLVAVLVDVVMM--NKLPALDYENKPALIFDE 241 Query: 178 PLWPQIPPSQRIAI---------EREARRLAGYRQG 204 + E EA+ Y G Sbjct: 242 TIHDNCERRGHFENGEFVYQFGSEEEAKNYCLYAMG 277 >UniRef50_C8QXK1 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QXK1_9DELT Length = 178 Score = 69.3 bits (168), Expect = 1e-10, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 48/163 (29%), Gaps = 41/163 (25%) Query: 34 AYVYRVDCGGCNACEIEI------FAAITPVFDAERFGIKVVSS-PRHADILLFTGAVTR 86 V V GC+ C + + P + + P D+ L GAV+ Sbjct: 5 LRVATVWLDGCSGCHMSFLDMDELLLELAPRLELAYSPLVDRKEFPDRVDLALLEGAVST 64 Query: 87 AMRMPALRAYESAPDHKICVSYGACGVGGGI-------------------FHDLYSVWG- 126 R + ++ V+ G C G + D + Sbjct: 65 PEDEAKARLVRA--HSRLVVALGDCACQGNVPALRNRLDNEQLLDLVYRQQADGPAAAPP 122 Query: 127 ------------GSDTIVPIDVWIPGCPPTPAATIHGFAVALG 157 ++ +D+++PGCPP PAA + L Sbjct: 123 DRNVPPLLTHSLPLHRVIAVDLFLPGCPPPPAAIVRALTAVLD 165 >UniRef50_B8ERX2 Hydrogen dehydrogenase n=1 Tax=Methylocella silvestris BL2 RepID=B8ERX2_METSB Length = 190 Score = 68.2 bits (165), Expect = 3e-10, Method: Composition-based stats. Identities = 27/165 (16%), Positives = 43/165 (26%), Gaps = 43/165 (26%) Query: 33 SAYVYRVDCGGCNACEIEIFAAIT---PVFDAERFGIKVVSS----PRHADILLFTGAVT 85 + GC C + + + D + R D+ G + Sbjct: 13 KPRLATCSLTGCFGCHMSLLDIDERILELIDLVDLDVSPFDDKKSFDRPVDVGFVEGGCS 72 Query: 86 RAMRMPALRAYESAPDHKICVSYGACGVGGGI--FHDLYSVWG----------------- 126 E +I VS GAC + GG+ + + Sbjct: 73 NE--YNVKELIEFRKHCRILVSVGACAINGGVPAMRNTVGLRECLEAVYLHGVSLEGGGM 130 Query: 127 ---------------GSDTIVPIDVWIPGCPPTPAATIHGFAVAL 156 S +V ID ++PGCPP+ A L Sbjct: 131 IPNDEDLPLLLDRVYPSHEVVKIDYFLPGCPPSGDAIWAALKALL 175 >UniRef50_C7NU23 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Halorhabdus utahensis DSM 12940 RepID=C7NU23_HALUD Length = 191 Score = 67.8 bits (164), Expect = 3e-10, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 51/177 (28%), Gaps = 47/177 (26%) Query: 36 VYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSS---------PRHADILLFTGAVTR 86 V V GGC+ C +E + D + +V+S P AD+ + G VT Sbjct: 17 VATVCLGGCSGCHMEFLNVDHGLVDLVEE-VDIVASHMIVDEKGVP-EADVGIAEGVVTN 74 Query: 87 AMRMPALRAYESAPDHKICVSYGACGVGGGI----------------------------F 118 + + V++G C GI F Sbjct: 75 EENVEVAEELRE--NCDTVVAWGDCAALRGIMSLRNYQDRDEMLEETFMGEADDESEVPF 132 Query: 119 HDLYSV------WGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYR 169 D V D + +DV++PGCPP +I + Sbjct: 133 GDDEGVPKLLEDARPLDEYIDVDVYVPGCPPDAEVMKESLEALARGETPEIEGDKLQ 189 >UniRef50_Q0W2X8 Coenzyme F420-reducing hydrogenase, gamma subunit n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W2X8_UNCMA Length = 232 Score = 67.8 bits (164), Expect = 4e-10, Method: Composition-based stats. Identities = 24/142 (16%), Positives = 43/142 (30%), Gaps = 18/142 (12%) Query: 33 SAYVYRVDCGGCNACEIEIFAAITPVFDA-ERFGIKV-------VSSPRHADILLFTGAV 84 V C+ CEI V D + I P+ D+L GA Sbjct: 3 KPKFAYVHLAACSGCEISFLDNFERVLDMMDMVDIDYMTLIADATEIPK-VDLLFVDGAA 61 Query: 85 TRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDL---------YSVWGGSDTIVPID 135 + ++ + V++G C I + + + +V +D Sbjct: 62 CLQSKESVESLKKARENTGFLVAWGGCSSTATINNFSRGGQSPQPQHESFPQISRLVKVD 121 Query: 136 VWIPGCPPTPAATIHGFAVALG 157 ++PG PP P + + Sbjct: 122 AFVPGSPPGPEMAYNVIRAFVE 143 >UniRef50_B1I576 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I576_DESAP Length = 317 Score = 67.4 bits (163), Expect = 4e-10, Method: Composition-based stats. Identities = 35/243 (14%), Positives = 63/243 (25%), Gaps = 69/243 (28%) Query: 33 SAYVYRVDCGGCNACEIEIFAAITPVFDAER-FGIKVVS---SPRHADI----------L 78 + C C++ I + D I ++AD+ Sbjct: 3 KLKLASYWAAACGGCDVAILDIHEKIVDVAAVADIVFWPIAVDFKYADVEGYEDGFIDVC 62 Query: 79 LFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGI--------------------- 117 LF GA+ + + K+ V++G+C + GGI Sbjct: 63 LFHGAIRNSEGEHVAKLL--RKKSKVMVAFGSCAISGGIPGLANFKQKNDIFYRVYIESQ 120 Query: 118 ----------------------FHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVA 155 + Y +V +D ++PGCPPT A Sbjct: 121 STQNPEKVYPQTHYAVPEGVLELPEFYKEVKSLSDVVDVDYFMPGCPPTSAQIWAVI--- 177 Query: 156 LGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIEREARRLAGYRQGREICDRLLRHL 215 Q I + R +++ ++ Y+ + I D L Sbjct: 178 -----QVIASGALPPKGAFVGCENQTLCNTCTRTKTDKKVKKF--YQPYQIITDPEKCLL 230 Query: 216 SDD 218 Sbjct: 231 EQG 233 >UniRef50_B5YFX1 F420-non-reducing hydrogenase subunit G n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YFX1_THEYD Length = 318 Score = 67.0 bits (162), Expect = 5e-10, Method: Composition-based stats. Identities = 38/243 (15%), Positives = 65/243 (26%), Gaps = 77/243 (31%) Query: 33 SAYVYRVDCGGCNACEIEIFAAITPVFDAE-----RFGIKVVSSPRH----------ADI 77 + GGC C+I + + D F V+ ++ D+ Sbjct: 3 KPKLAYYLAGGCGGCDIAVVDISEMLVDVALAVDIVFWAPTVADVKYKDLEAMPDGSIDV 62 Query: 78 LLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGI----------------FHDL 121 LFTG V + + + K+ +++G C GGI + + Sbjct: 63 GLFTGNVRNSEHEHIAKVLRN--KCKVLIAFGICAACGGIKGLVNLHTTDELLDKAYVNT 120 Query: 122 YSV---------------------------WGGSDTIVPIDVWIPGCPPTPAATIHGFAV 154 +S D +V +D +I GCPP F Sbjct: 121 FSTDNPNKELPQTTCVVDGKYELTLPTLMYARPLDEVVKVDYYIGGCPPHYEHVKAAFTA 180 Query: 155 ALG----------LLQQKIHAVDYRDPTGVTMQPLWPQIP-------PSQRIAIEREARR 197 L + + + V R+P PS+ + E Sbjct: 181 LLSGQLPPPGSWITMGKAVCEVCDRNPVLKGKPKKLATEVKRTIDGAPSEDGCLLEEGYL 240 Query: 198 LAG 200 G Sbjct: 241 CLG 243 >UniRef50_A0LKF2 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LKF2_SYNFM Length = 300 Score = 66.6 bits (161), Expect = 7e-10, Method: Composition-based stats. Identities = 40/220 (18%), Positives = 65/220 (29%), Gaps = 66/220 (30%) Query: 44 CNACEIEIFAAITPVFD-AERFGI------------------KVVSSPRHADILLFTGAV 84 C CE+ I + D ER I VVS PR AD+ + +G + Sbjct: 14 CAGCEVAILDQGELLLDILERISIVHAPILMDSKYRDPAGDSDVVSIPR-ADVGIVSGGI 72 Query: 85 TRAMRMPALRAYESAPDHKICVSYGACGVGGGI--------------------------- 117 + +A I ++ G+C GGI Sbjct: 73 RTEHGLAVAKA--VRESCDILIANGSCACMGGIPSLANLVPPDVLKQGVPNLEHGVEDGD 130 Query: 118 --FHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLL--------------QQ 161 L + + +VP+D+++PGCPP L + Sbjct: 131 FELPPLTARVAAINEVVPVDIFLPGCPPPTHLFAAALQAVLEGRSFDLPEDTVCNECSKT 190 Query: 162 KIHAVDYRDPTGVTMQPLWP-QIPPSQRIAIEREARRLAG 200 K + D + L P + PP + + + G Sbjct: 191 KEKRTVFADNGLQFPEMLRPLETPPLDKRCLIEQGFFCMG 230 >UniRef50_C7NPL1 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Halorhabdus utahensis DSM 12940 RepID=C7NPL1_HALUD Length = 266 Score = 66.2 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 50/161 (31%), Gaps = 34/161 (21%) Query: 33 SAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHA--------DILLFTGAV 84 V D GC ++++ + D + V S R A +I G V Sbjct: 6 KPRVAFFDFTGCEGDQLQVINLEDRLLDLVE--VVEVVSFREAMTEHSDEYEIAFVEGGV 63 Query: 85 TRAMRMPALRAYESAPDHKICVSYGACGVGGGI----------------FHD------LY 122 A R + + + V+ G+C GGI + + Y Sbjct: 64 ATAHDE--RRLTDIRDNADVVVALGSCAAFGGINALRNHQDFETVKERVYGEDADSITSY 121 Query: 123 SVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKI 163 + + ++ ++ IPGCP + + + I Sbjct: 122 PIARPIEDVIEVEYEIPGCPIDREEFLGAVTALVNGAEPSI 162 >UniRef50_D1Z1F3 Coenzyme F420 hydrogenase subunit gamma n=1 Tax=Methanocella paludicola SANAE RepID=D1Z1F3_METPS Length = 235 Score = 65.5 bits (158), Expect = 1e-09, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 45/141 (31%), Gaps = 16/141 (11%) Query: 33 SAYVYRVDCGGCNACEIEIFAAITPVFDA-ERFGIKVVSSPRHA------DILLFTGAVT 85 V C+ CEI + D + I+ ++ + A DI+ GA Sbjct: 3 KPKFAYVHLAACSGCEISFLDNFERLLDMMDMVDIEYMTLIKDATDIPKVDIVFVDGAAC 62 Query: 86 RAMRMPALRAYESAPDHKICVSYGACGV---------GGGIFHDLYSVWGGSDTIVPIDV 136 ++ + V++G C GG + + + +V +D Sbjct: 63 LQSEDAVETLKKARENATYLVAWGGCSSTATINNFSRGGQLPQPQHESFPPIKRLVKVDA 122 Query: 137 WIPGCPPTPAATIHGFAVALG 157 +PG PP P + + Sbjct: 123 SVPGSPPGPGMAYNVIRAFVE 143 >UniRef50_Q39QE2 F420-non-reducing hydrogenase subunit G n=5 Tax=Geobacter RepID=Q39QE2_GEOMG Length = 316 Score = 65.5 bits (158), Expect = 2e-09, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 45/166 (27%), Gaps = 42/166 (25%) Query: 75 ADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDL------------- 121 A + L +GA+ A A E + +++G+C V GGI Sbjct: 52 AKLGLVSGAIRTEHDRHA--AIEMRKSCDLIIAWGSCAVYGGIAGAGNVHSRQEIIDAVY 109 Query: 122 -------------------YSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQK 162 D+++ +D+++PGC P PA L + Sbjct: 110 IGNKTTATHAPPTKEVSALEPSVSPLDSVIDVDLYLPGCAPHPAFVFDALLALLEGRSPR 169 Query: 163 IHAV--------DYRDPTGVTMQPLWPQIPPSQRIAIEREARRLAG 200 + T V + P + G Sbjct: 170 TATGESVCARCRRKMEKTEVDRIRKNSEGVPDPDRCFLSQGYLCMG 215 >UniRef50_B6YU80 Cytosolic NiFe-hydrogenase, delta subunit n=9 Tax=Thermococcaceae RepID=B6YU80_THEON Length = 265 Score = 65.1 bits (157), Expect = 2e-09, Method: Composition-based stats. Identities = 41/269 (15%), Positives = 83/269 (30%), Gaps = 56/269 (20%) Query: 33 SAYVYRVDCGGCNACEIEIFAAITPV-----------FDAERFGIKVVSSPRHADILLFT 81 + C C++ + + +R + DI Sbjct: 4 KVRIGFYALTSCYGCQLRFAMMDEILQLLPNAEIVCWYMLDRDSSEDEP----VDIAFIE 59 Query: 82 GAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGI------------FHDLYS------ 123 G+V+ + + KI V+ GAC GG+ + +Y Sbjct: 60 GSVS--TEEEVELVKKIRENAKIVVAVGACATQGGVQSWEKDKSLEELWKAVYGDGKVKF 117 Query: 124 ---VWGGSDTIVPIDVWIPGCPPTPAATIHGFAV-ALGLLQQKIHAV-----DYRDPTGV 174 + + + +D I GCPP I+ +G + I + T + Sbjct: 118 EPKMAEPLENYIKVDYRIYGCPPEKKDFIYAIGTFLVGSWPEDIDYPVCLECRLKGNTCI 177 Query: 175 TMQPLWPQIPPSQRIAIERE----ARRLAGYR--QGREIC--DRLLRHLSDDPTGNR--- 223 ++ P + P R + G R G ++ D L R + Sbjct: 178 LIEKGEPCLGPITRAGCDARCPSYGIACIGCRGAIGYDVAWFDSLARTFKEKGLTKEEIL 237 Query: 224 VNTWLRDADDPRLNSIVQQLFRVLRGLHD 252 + +A +P+L +V ++F+ +G+ + Sbjct: 238 ERMKIFNAHNPKLEEMVDKVFQ-FQGVKE 265 >UniRef50_Q2KJQ3 HoxY n=4 Tax=Proteobacteria RepID=Q2KJQ3_CHRVI Length = 180 Score = 64.7 bits (156), Expect = 3e-09, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 51/163 (31%), Gaps = 42/163 (25%) Query: 33 SAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSP--------RHADILLFTGAV 84 V GC+ C + + + +++V SP D+ + G++ Sbjct: 6 KITVATAWLDGCSGCHMSFLDLDERLIELVEH-VEIVYSPLVDTKELPARVDVGILEGSI 64 Query: 85 TRAMRMPALRAYESAPDHKICVSYGACGVGGGI----------------FHDLYSV---- 124 + + R + VS G C V G + + + ++ Sbjct: 65 SSEDDLEKARLFRER--CTRLVSLGDCAVTGNVPAMRNHFKLADVFDRAYRENVTLQPQI 122 Query: 125 -----------WGGSDTIVPIDVWIPGCPPTPAATIHGFAVAL 156 V +DV++PGCPP+ A H + + Sbjct: 123 PTRRVPALLTPVKPVHGEVKVDVFVPGCPPSADAIWHVLSELI 165 >UniRef50_C8S807 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8S807_FERPL Length = 299 Score = 63.9 bits (154), Expect = 4e-09, Method: Composition-based stats. Identities = 23/169 (13%), Positives = 49/169 (28%), Gaps = 50/169 (29%) Query: 32 RSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHA-----------DILLF 80 + + GC+ C + F +ERF + ++ D+ Sbjct: 2 KKIRLAFYTASGCSGCILSFFDLEEFFLSSERFSVVWAPMFTNSKLEDLEKIERIDLTFI 61 Query: 81 TGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGI--FHDLYS--------------- 123 G++ + ++ + V+ G C V GG+ + YS Sbjct: 62 EGSIRLSEHEEIVKILREKSEK--VVALGTCAVFGGVPGLSNFYSDEEILSDVFDSDENA 119 Query: 124 --------------------VWGGSDTIVPIDVWIPGCPPTPAATIHGF 152 + ++ +D ++PGCPP+ + Sbjct: 120 PKPRTLLDGKYELTLPEFKDEMKRVEEVIEVDHFVPGCPPSKNQLLKII 168 >UniRef50_A8UU12 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UU12_9AQUI Length = 252 Score = 63.1 bits (152), Expect = 7e-09, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 47/158 (29%), Gaps = 27/158 (17%) Query: 30 IRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRH----ADILLFTGAVT 85 ++ V C+ C+ +++ F + + DI G+V+ Sbjct: 1 MKNKLRVGVFKLSSCDGCQAIFLDL-PSLWEHLDFRYWFLGKSENKLEPIDIAFVEGSVS 59 Query: 86 RAMRMPALRAYESAPDHKICVSYGACGVGGGI-----------FHDLYSVWG-------- 126 A E ++ V+ GAC GGI F +Y Sbjct: 60 TQ--EEAEFIKEVREKARLLVTIGACATSGGIQALRNFGSLEEFSSVYPKPEFIKVLKRS 117 Query: 127 -GSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKI 163 V +D I GCP P + L + +I Sbjct: 118 TPISEHVKVDYEIYGCPINPHILENFVKALLHSRRPEI 155 >UniRef50_C1DUF2 Quinone-reactive Ni/Fe-hydrogenase small chain (Membrane-bound hydrogenase small subunit) (Hydrogen:quinoneoxidoreductase) n=3 Tax=Bacteria RepID=C1DUF2_SULAA Length = 416 Score = 62.0 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 40/132 (30%), Gaps = 21/132 (15%) Query: 77 ILLFTGAVTRAMRMP----------ALRAYESAPDHKICVSYGACGVGGGI---FHDLYS 123 +L G++ M R A D K ++ GAC GG+ + + Sbjct: 166 LLFVEGSIPVKMEYAFTTGRHPETGVQRVRRLAKDAKAVIAVGACASFGGVPAAYPNPTG 225 Query: 124 VWGGSDTI--VPIDVWIPGCPPTPAATIHGFA--VALGLLQQKIHAVDYRDPTGVTMQPL 179 G D + VP+ V IP CP P + V G L + + P + Sbjct: 226 AVGVMDVVSGVPV-VNIPACPANPVNIVGVIMHYVLTGSLPE---LDSLKRPKFAFGYRI 281 Query: 180 WPQIPPSQRIAI 191 Sbjct: 282 HDNCERRAHFDA 293 >UniRef50_Q85WY3 ORF82a n=1 Tax=Pinus koraiensis RepID=Q85WY3_PINKO Length = 82 Score = 61.2 bits (147), Expect = 3e-08, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 7/55 (12%) Query: 111 CGVGGGIFH-------DLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGL 158 C G +++ D YS D ++P+DV+ P CP P I Sbjct: 21 CSCPGSMYYHIEMFGTDSYSTVHEVDKLIPVDVYSPDCPTEPEVIIDAITKLRER 75 >UniRef50_B6YSK0 Sulfhydrogenase II, delta chain n=6 Tax=Thermococcaceae RepID=B6YSK0_THEON Length = 246 Score = 61.2 bits (147), Expect = 3e-08, Method: Composition-based stats. Identities = 28/173 (16%), Positives = 48/173 (27%), Gaps = 31/173 (17%) Query: 33 SAYVYRVDCGGCNACEIEIFAAITPVFDAERFG-------IKVVSSPRHADILLFTGAVT 85 + + C C + I +FD F +S H D+ L TG V+ Sbjct: 4 KLKLAVFELTDCGGCALNILFLYEKLFDLLEFYEITEFHMATSLSEGSHYDVALVTGTVS 63 Query: 86 RAMRMPALRAYESAPDHKICVSYGACGVGGGI-----------FHDLYSVWG-------- 126 + L+ E+ ++ G C G + +Y G Sbjct: 64 SQRDLALLK--EARNHSDYLIALGTCATHGSVQASVEGSIREKLKRVYGDEGNPMRALDS 121 Query: 127 -GSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQ--QKIHAVDYRDPTGVTM 176 V +D +PGCP ++ +K + V Sbjct: 122 KPVVEYVAVDFALPGCPYDKNEVYQVLMDIAKGIEPVKKDYPVCVECKLNEYE 174 >UniRef50_C9R9W3 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Ammonifex degensii KC4 RepID=C9R9W3_AMMDK Length = 319 Score = 61.2 bits (147), Expect = 3e-08, Method: Composition-based stats. Identities = 35/243 (14%), Positives = 65/243 (26%), Gaps = 69/243 (28%) Query: 33 SAYVYRVDCGGCNACEIEIFAAITPVFDA-ERFGIKVVSS------------PR-HADIL 78 + C C++ I D + I + P + D+ Sbjct: 4 KLKIASYWAADCGGCDVAILDTHEKFLDIVQAADIVFMPIAVDIKEKDVEAFPDGYIDVC 63 Query: 79 LFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGG----------------IFHDLY 122 F GA+ + + K+ V++G+C + GG ++ + Sbjct: 64 FFHGAIRNSENEHMAKLLRR--KSKVLVAFGSCAMMGGVPGLANFKDREGILSRVYFESP 121 Query: 123 SVWGG---------------------------SDTIVPIDVWIPGCPPTPAATIHGFAVA 155 S +V +D ++PGCPP ++ F Sbjct: 122 STDNPDKVLPQTETQVREGVLTLPAFYEEVKTLADVVDVDYFMPGCPPASHQIVNVF--- 178 Query: 156 LGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIEREARRLAGYRQGREICDRLLRHL 215 Q I A + P ++ + + I+ YR I D L Sbjct: 179 -----QAIVAGNL--PPKGSIVGASTKSVCEECSRIKENKTIKRFYRVHEIIPDPERCLL 231 Query: 216 SDD 218 Sbjct: 232 EQG 234 >UniRef50_D2BG44 Ni/Fe hydrogenase, small subunit n=5 Tax=Dehalococcoides RepID=D2BG44_DEHSV Length = 354 Score = 60.8 bits (146), Expect = 4e-08, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 38/137 (27%), Gaps = 24/137 (17%) Query: 77 ILLFTGAVTRAMRMP--------------ALRAYESAPDHKICVSYGACGVGGGIFH--D 120 +L+ G+V AP V+ G C GGI Sbjct: 112 VLVIEGSVPLKDDGVYAEIGEKDGEGITMLEHVLNLAPKALAVVAAGTCSAFGGITASAP 171 Query: 121 LYSVWGGSDTIV-------PIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTG 173 + I+ P+ V +PGCPP P + A L + D P Sbjct: 172 NPTGAKAVSEILKEHNITTPV-VNLPGCPPHPDWVVGTLATVLMSGLDALDLDDMGRPKA 230 Query: 174 VTMQPLWPQIPPSQRIA 190 + L Q P Sbjct: 231 YYGKLLHDQCPRRGHYE 247 >UniRef50_P13061 Periplasmic [NiFe] hydrogenase small subunit n=63 Tax=Proteobacteria RepID=PHNS_DESDA Length = 315 Score = 60.8 bits (146), Expect = 4e-08, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 55/201 (27%), Gaps = 44/201 (21%) Query: 30 IRRSAYVYRVDCGGCNACEIEIFAAITPVFD---AERFGIKV------------------ 68 R V + C C + P D + + Sbjct: 52 TGRRPSVVYLHAAECTGCSEALLRTYQPFIDTLILDTISLDYHETIMAAAGEAAEEALQA 111 Query: 69 -VSSPRHAD--ILLFTGAVTRAM-----RMPALRAYESA----PDHKICVSYGACGVGGG 116 V+ P D I L GA+ M + Y+ P K VS G C GG Sbjct: 112 AVNGP---DGFICLVEGAIPTGMDNKYGYIAGHTMYDICKNILPKAKAVVSIGTCACYGG 168 Query: 117 IF--HDLYSVWGGSDTI---VPI-DVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRD 170 I + G + + + + +PGCPP P + L QKI + Sbjct: 169 IQAAKPNPTAAKGINDCYADLGVKAINVPGCPPNPLNMVGTLVAFLK--GQKIELDEVGR 226 Query: 171 PTGVTMQPLWPQIPPSQRIAI 191 P Q + + Sbjct: 227 PVMFFGQSVHDLCERRKHFDA 247 >UniRef50_B8FWY3 Hydrogenase (NiFe) small subunit HydA n=2 Tax=Desulfitobacterium hafniense RepID=B8FWY3_DESHD Length = 375 Score = 59.7 bits (143), Expect = 8e-08, Method: Composition-based stats. Identities = 30/212 (14%), Positives = 56/212 (26%), Gaps = 42/212 (19%) Query: 15 LDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITP------------VFDAE 62 + T ++++ L Q + V+ G C I + +P +D Sbjct: 21 ISLVTPELEKALAQGEINKLPIIMVETGTCTGDSISLDNIWSPTLSDIFTNITEWRYDWT 80 Query: 63 --------RFGIKVVSSPRHAD--ILLFTGAVTRAMRMP--------------ALRAYES 98 + + + A +LL G++ R Sbjct: 81 MMQSQGELAYDVLLEIEKNQAHEFVLLVQGSMIRRDGGHYNYAGLENGQLITGLDLVRRL 140 Query: 99 APDHKICVSYGACGVGGGIFHDLYSVWG--GSDTIVPID--VWIPGCPPTPAATIHGFAV 154 K V+ G C GG + G I+P + + GCP P + Sbjct: 141 GLKAKYVVAVGHCATYGGPVAGYPNPTQSTGVQNILPERRVINVSGCPAHPDWIMGTLLH 200 Query: 155 ALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPS 186 L + + P + + P Sbjct: 201 LA--LYGEPELEKFGRPKMFFGETIHNNCPRR 230 >UniRef50_B1L3Q1 Coenzyme F420-reducing hydrogenase, gamma subunit n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L3Q1_KORCO Length = 258 Score = 59.7 bits (143), Expect = 8e-08, Method: Composition-based stats. Identities = 40/250 (16%), Positives = 69/250 (27%), Gaps = 44/250 (17%) Query: 40 DCGGCNACEIEIFAAIT---------PVFDAERFGIKVVSSPRH----ADILLFTGAVTR 86 C+ E + + D F + +S + DI G+V+ Sbjct: 7 AFYSLTGCQGEYLTILGMEDILLDLLSLVDIAEFKL---ASSKEYDGKVDIAFVEGSVS- 62 Query: 87 AMRMPALRAYESAPDHKICVSYGACGVGGGIF-------------------HDLYSVWG- 126 + KI V+ G C V GGI +LY G Sbjct: 63 -TERDLEYIKRIRGNSKILVALGDCAVWGGIQASTSGQDPKELMRSVYKTEKNLYGFLGE 121 Query: 127 --GSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDY---RDPTGVTMQPLWP 181 G +VP+D I GCP + ++ ++ + + Sbjct: 122 HKGISEVVPVDYEIQGCPIEGKEFARVLIDLVRDVKPELPDYPVCIECKVREIPCLIVER 181 Query: 182 QIPPSQRIAIEREARRLAGYRQGREICDRLLRHLSDDPTGNRVNTWLRDADDPRLNSIVQ 241 +P I + R Y C +R + G + D R+ ++ Sbjct: 182 GLPCLGPITVAGCDARCPSYNTACIGCRGPIRD-EANVAGELEMLLRKGYDRERILDLMS 240 Query: 242 QLFRVLRGLH 251 +GL Sbjct: 241 LFGARYKGLR 250 >UniRef50_C0QP84 Putative [NiFe] hydrogenase, delta subunit n=1 Tax=Persephonella marina EX-H1 RepID=C0QP84_PERMH Length = 249 Score = 58.9 bits (141), Expect = 1e-07, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 40/143 (27%), Gaps = 32/143 (22%) Query: 39 VDCGGCNACEIEIFAAITPVFDAE---RFGIKV----VSSPRHADILLFTGAV-TRAMRM 90 C+ C+I F + E R + + DI G+V T Sbjct: 7 FKFASCDGCQISFFDISEMLSHLEEKVRIKYFIEGQDRNEFERFDISFIEGSVSTPEQEE 66 Query: 91 PALRAYESAPDHKICVSYGACGVGGGI--------FHDLYSVW-------------GGSD 129 + + + V+ GAC GGI + D+ Sbjct: 67 KVKKIRDV---SEYVVTIGACSSSGGIQSVRNFSDYKDIVCSVYPKPEMIKSLERSRPVS 123 Query: 130 TIVPIDVWIPGCPPTPAATIHGF 152 + +D I GCP A + Sbjct: 124 DYIDVDFEIRGCPINKEALLEVI 146 >UniRef50_P22319 NAD-reducing hydrogenase hoxS subunit delta n=6 Tax=Bacteria RepID=HOXY_RALEH Length = 209 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 49/188 (26%), Gaps = 45/188 (23%) Query: 13 ITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSS- 71 + + M L + V + GC C + + + SS Sbjct: 10 ASHELPATPMDPALAANREGKIKVATIGLCGCWGCTLSFLDMDERLLPLLEKVTLLRSSL 69 Query: 72 ------PRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGI-------- 117 P I G V+ + I +S GAC V GG+ Sbjct: 70 TDIKRIPERCAIGFVEGGVSSE--ENIETLEHFRENCDILISVGACAVWGGVPAMRNVFE 127 Query: 118 --------FHDLYSVWGGSDTIVPI--------------------DVWIPGCPPTPAATI 149 + + + G+ +VP D +IPGCPP A Sbjct: 128 LKDCLAEAYVNSATAVPGAKAVVPFHPDIPRITTKVYPCHEVVKMDYFIPGCPPDGDAIF 187 Query: 150 HGFAVALG 157 + Sbjct: 188 KVLDDLVN 195 >UniRef50_Q06173 Periplasmic [NiFe] hydrogenase small subunit 1 n=17 Tax=Bacteria RepID=PHNS1_DESVH Length = 317 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 31/199 (15%), Positives = 55/199 (27%), Gaps = 43/199 (21%) Query: 32 RSAYVYRVDCGGCNACEIEIFAAITPVFD---AERFGIKV-------------------V 69 R V + C C + A P D + + V Sbjct: 55 RRPSVVYLHNAECTGCSESVLRAFQPYLDELILDTISLDYHETIMAAAGDAAEAALHQAV 114 Query: 70 SSPRHAD--ILLFTGAVTRAM---------RMPALRAYESAPDHKICVSYGACGVGGGIF 118 ++P D I + GA+ A + P K ++YG C GG+ Sbjct: 115 ANP---DGFICIVEGAIPTADNGIYGKVANHTMLSICSDIVPKAKAVIAYGTCATFGGVQ 171 Query: 119 --HDLYSVWGGSDTIVP---ID-VWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPT 172 + G + + ++ + + GCPP P + L ++ P Sbjct: 172 AAKPNPTGAKGLNDALKHLGVNAINLAGCPPNPYNLVGTLVYYL-KNNAAPEMDEFNRPL 230 Query: 173 GVTMQPLWPQIPPSQRIAI 191 Q + P + Sbjct: 231 MFFGQSVHDNCPRLKHFDA 249 >UniRef50_B9KFD7 Quinone-reactive Ni/Fe-hydrogenase, small subunit n=2 Tax=Campylobacter RepID=B9KFD7_CAMLR Length = 544 Score = 58.1 bits (139), Expect = 2e-07, Method: Composition-based stats. Identities = 36/196 (18%), Positives = 56/196 (28%), Gaps = 44/196 (22%) Query: 33 SAYVYRVDCGGCNACEIEIFAAITP-----VFD---AERFGIKVVSSPRHA--------- 75 S + C C + P +FD E + +S A Sbjct: 62 SLIWLHLSE--CTGCSESLLRTSLPDFLDLIFDFISLEYHETFMSASGHQAESHLEEVLE 119 Query: 76 --DILL-FTGAVT-------------RAMRMPALRAYESAPDHKICVSYGACGVGGGIF- 118 D LL G V + A + K + G C GGI Sbjct: 120 KKDFLLAVEGGVCAIDPFYLTIGAHGENGYEILQKC---AKNAKTIFAMGTCSSFGGIQA 176 Query: 119 -HDLYSVWGGSDTIV--PIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVT 175 H + G ++ + + IPGCPP+ A I + L +Q + D P + Sbjct: 177 AHPNPTKSIGISKVLEEKV-INIPGCPPSDANIIAALCFYI-LFEQDMALDDQNRPLALY 234 Query: 176 MQPLWPQIPPSQRIAI 191 + L + Sbjct: 235 GKCLHDLCERKAKFEA 250 >UniRef50_Q3ABV6 [Ni/Fe] hydrogenase, small subunit n=3 Tax=Clostridia RepID=Q3ABV6_CARHZ Length = 354 Score = 58.1 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 63/216 (29%), Gaps = 47/216 (21%) Query: 15 LDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRH 74 L + ++ L + V + C C + + ++ P D + +++++ H Sbjct: 22 LSQSVPEVAYALENAAKGQPPVIWIQGASCTGCSVSLLNSVHP--DIKEILLEIINLKFH 79 Query: 75 ADI------------------------LLFTGAVTRA--------------MRMPALRAY 96 +I L+ GAV + Sbjct: 80 PNISAATGHVAVEAFLGEAEKNKGKFFLVVEGAVPTKDNGVYCSIGEKDGRELYFSEVVK 139 Query: 97 ESAPDHKICVSYGACGVGGGIFHDLYSVWG--GSDTIV---PIDVWIPGCPPTPAATIHG 151 E K ++ G C GGI + G ++ + + IPGCPP P + Sbjct: 140 ELGEKAKAVIAIGTCAAFGGIPAADPNPTGCVPVTEVIDPKKV-LNIPGCPPHPDWFVGS 198 Query: 152 FAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQ 187 A L L + + P + P Q Sbjct: 199 LAHVL-LYNELPKTDKFGRPKMFYEGIIHDNCPRRQ 233 >UniRef50_Q2IH66 Methyl-viologen-reducing hydrogenase, delta subunit n=4 Tax=Anaeromyxobacter RepID=Q2IH66_ANADE Length = 491 Score = 58.1 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 41/245 (16%), Positives = 58/245 (23%), Gaps = 71/245 (28%) Query: 33 SAYVYRVDCGGCNACEIEIFAAITPVF---------------DAERFGIKVVSSPRHADI 77 V C CE + D +R ++ + D+ Sbjct: 168 KPRVAFYWNASCGGCEEAVVDLGDGFAGLLERVEVVLWPVATDHKRADVEALPD-GGIDL 226 Query: 78 LLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGI----------------FHDL 121 GAV + R + V++GAC GG+ + Sbjct: 227 AFVNGAVRLDEQEEWARLLRR--KARTVVAFGACAHLGGVVGLGNLSEPEALLEAAYRAP 284 Query: 122 YSVWGG---------------------------SDTIVPIDVWIPGCPPTPAATIHGFAV 154 SV +V +D IPGCPP+PA Sbjct: 285 PSVSNPEAPLPGGPVRADGATLSLPVLLPRTLTLADVVSVDYTIPGCPPSPAVVQAALDA 344 Query: 155 ALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIE-REARRLAGYRQGREICDRLLR 213 LG D P G + P R A R D L Sbjct: 345 LLG---------DAPPPRGAVLAPDVSLCEDCPRKGSRPERIELHALRRLATSAVDPELC 395 Query: 214 HLSDD 218 L+ Sbjct: 396 FLAQG 400 >UniRef50_Q2J4E9 NADH ubiquinone oxidoreductase, 20 kDa subunit n=29 Tax=Bacteria RepID=Q2J4E9_FRASC Length = 278 Score = 57.8 bits (138), Expect = 3e-07, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 47/155 (30%), Gaps = 34/155 (21%) Query: 41 CGGCNACEIEIFAA------ITPVFDAERF---GIKVVSSPRHADILLFTGAVTRAMRMP 91 C+ C++ + + D F V P D+ L G+VT Sbjct: 25 FASCDGCQLTLLDCEDELLSLAGEIDVSYFLEASSATVDGP--YDLSLVEGSVTTEQD-- 80 Query: 92 ALRAYESAPDHKICVSYGACGVGGGI---------------------FHDLYSVWGGSDT 130 R ++ + V+ GAC GGI + + T Sbjct: 81 VERIHQVRAASRRLVTIGACATAGGIQALRNFADVGDFLAAVYATPAYVSTLATSTPIST 140 Query: 131 IVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHA 165 V +D + GCP P + + L + I + Sbjct: 141 HVRVDFELQGCPINPRQLLEVISAFLARRRPNISS 175 >UniRef50_Q6ARY6 Related to periplasmic [NiFeSe] hydrogenase, small subunit [Precursor] n=1 Tax=Desulfotalea psychrophila RepID=Q6ARY6_DESPS Length = 300 Score = 56.6 bits (135), Expect = 7e-07, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 58/225 (25%), Gaps = 43/225 (19%) Query: 18 QTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPV-FDAERFGI---------- 66 Q + L + ++ C+ C I + + +P + I Sbjct: 29 QVAEALEALTTGRSKVLWL---QAQSCSGCSISMLDSESPGPAELLTQYISLLFHHTLSA 85 Query: 67 --------KVVSSPRHAD-ILLFTGAVTRAMRMPALR--------AYESAPDHKICVSYG 109 V S + IL+ G++ M + ++A ++ G Sbjct: 86 ATGESCMHIVRKSVQQGGYILVVEGSIPAGMPEACMMGGIPVGELIKQAAERADYVIALG 145 Query: 110 ACGVGGGI--FHDLYSVWGGSDTIVPID------VWIPGCPPTPAATIHGFAVALGLLQQ 161 C GGI + + + + IPGCP P + Sbjct: 146 TCAAFGGIPAAEGNPTGAVPLGPFLQANKIKTPIINIPGCPSHPDWLVGTLVHLCK--FG 203 Query: 162 KIHAVDYRDPTGVTMQPLWPQIPPSQRIAIEREARR--LAGYRQG 204 + R P + P E AR+ G Sbjct: 204 LPPCDEQRRPKMFFASKNHDKCPRFSDYEQENFARKFSDPGCLFK 248 >UniRef50_C5S9B0 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S9B0_CHRVI Length = 251 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 46/161 (28%), Gaps = 35/161 (21%) Query: 33 SAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHA------D--ILLFTGAV 84 V + C C++ + + E + + R A D I G+ Sbjct: 2 KPKVAFFEFTSCEGCQLTVLDTLQRH--PELLEVIEIVQFREAMSERGEDYQIAFIEGSC 59 Query: 85 TRAMRMPALRAYESAPDHKICVSYGACGVGGGI----------------------FHDLY 122 TR + E +I V+ GAC GGI + + Y Sbjct: 60 TRPSDEA--KIREIREQAQIVVALGACAHLGGINAIRNRMPLEQTREYVYGDKKDWFETY 117 Query: 123 SVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKI 163 ++ +D IPGCP L + I Sbjct: 118 P-ARPLSAVIEVDAVIPGCPIDRKEFATAVTHLLQGRKPAI 157 >UniRef50_A7IHL6 Ni Fe-hydrogenase III large subunit-like protein n=4 Tax=Proteobacteria RepID=A7IHL6_XANP2 Length = 110 Score = 55.4 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 24/68 (35%) Query: 54 AITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGV 113 A+ D R G+ PR A++LL + M A AY P + + G + Sbjct: 41 ALAAGLDLSRAGLTEADGPRQANVLLVMLPLPAPMLKAATVAYAQMPRPRTVLVLGEGVI 100 Query: 114 GGGIFHDL 121 D Sbjct: 101 APLPEPDS 108 >UniRef50_C8WGI4 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WGI4_EGGLE Length = 261 Score = 55.4 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 45/154 (29%), Gaps = 34/154 (22%) Query: 33 SAYVYRVDCGGCNACEIEIFAAITPVFDAERFG-IKVV--------SSPRHADILLFTGA 83 + V V C C+++I A + D G I + P D+ + GA Sbjct: 14 APRVVVVGLASCFGCQLQITNAEAHLLDV--LGQIDLRYWQLASSDPMPEDFDVAIIEGA 71 Query: 84 VTRAMRMPALRAYESAPDHKICVSYGACGVGGGI-------FHDLYSVW----------- 125 VT +R+ ++ GAC GI F + Sbjct: 72 VTTEESEATVRSLRE--KAGAIIAVGACATTAGIPGMAAEGFLERPGQVYDRVPSACGDM 129 Query: 126 ---GGSDTIVPIDVWIPGCPPTPAATIHGFAVAL 156 ++ +D + CP I AL Sbjct: 130 VAPRAVGAVIDVDFEVRACPIDSYDFIDVLQRAL 163 >UniRef50_B4U5S1 Hydrogenase (NiFe) small subunit HydA n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U5S1_HYDS0 Length = 320 Score = 55.4 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 31/173 (17%), Positives = 57/173 (32%), Gaps = 38/173 (21%) Query: 25 HLLQDIRRSAYVYRVDCGG--CNACEIEIFAAITPVF------------DAERFGI---- 66 ++ +++ + + G C C + + +PVF D Sbjct: 38 DIINALKQKPRIPVLWFHGLECTCCSESLMRSSSPVFSDMVSLISLEYDDLISASCGENL 97 Query: 67 -----KVVSSPRHADILLFTGAVTRAMRMPA---------LRAYESAPDHKICVSYGACG 112 K++ + IL G++T E+A K +++G+C Sbjct: 98 LNYKKKIIEQYKGNYILAIEGSITEFEDGACCMVGGRSFNEELLEAAEGAKAIIAWGSCA 157 Query: 113 VGGGIF--HDLYSVWGGSDTIV---PIDVWIPGCPPTPAATIHGFAVALGLLQ 160 G + + + DTI+ PI V +PGCPP P L + Sbjct: 158 SFGCVQVAYPNPTKSSSVDTIIKNKPI-VKVPGCPPIPEVMASVIVYMLLKDE 209 >UniRef50_B5EBV9 NADH ubiquinone oxidoreductase 20 kDa subunit n=5 Tax=Geobacter RepID=B5EBV9_GEOBB Length = 251 Score = 55.1 bits (131), Expect = 2e-06, Method: Composition-based stats. Identities = 24/151 (15%), Positives = 40/151 (26%), Gaps = 45/151 (29%) Query: 43 GCNACEIEIFAA------ITPVFDAERF--------GIKVVSSPRHADILLFTGAVTRAM 88 C+ C++ + + FD F G D + GAV+ Sbjct: 13 ACSGCQLTLLNCEDELAQVAARFDLVSFPMAESVEGGAPF-------DAAIVEGAVS--T 63 Query: 89 RMPALRAYESAPDHKICVSYGACGVGGGI-----------------FHDLYSVWG----- 126 + ++ V+ G C + GG+ + D Sbjct: 64 PGDLANLFRLRNSSRLLVALGTCAIFGGVAAMNNGVSTREELVAAVYGDGEKTVESFAPA 123 Query: 127 GSDTIVPIDVWIPGCPPTPAATIHGFAVALG 157 V +D I GCPP + L Sbjct: 124 PLTNFVSVDFSITGCPPEKQEVMALLCALLN 154 >UniRef50_Q1NJF2 NADH ubiquinone oxidoreductase, 20 kDa subunit n=3 Tax=delta proteobacterium MLMS-1 RepID=Q1NJF2_9DELT Length = 366 Score = 55.1 bits (131), Expect = 2e-06, Method: Composition-based stats. Identities = 41/235 (17%), Positives = 65/235 (27%), Gaps = 71/235 (30%) Query: 33 SAYVYRVDCGGCNACEI----------EIFAAITPVF-----DAERFGIKVVSSPRHADI 77 + C CEI E+ AA F D ++ I+ ++ A + Sbjct: 4 KPKLAIYWAAACGGCEIAVVNLHEKILELDAAFELFFCPCLLDTKKGDIEALADGEIA-V 62 Query: 78 LLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGI-------------------- 117 LF GA+ + + + +++G+C V G I Sbjct: 63 TLFNGAIRTSENEEMAQLLRR--KSQTLIAFGSCAVEGCIPGLANLYDRTAIFNTVYLDN 120 Query: 118 -----------------------FHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAV 154 + Y +V +D +IPGCPP P Sbjct: 121 PSLDNPAGILPQTRSQVPEGELRLPEFYDRVQTLADVVAVDFFIPGCPPEPPRIWQAVES 180 Query: 155 ALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIEREARRLAGYRQGREICD 209 L D P V R E++ +R YR + I D Sbjct: 181 LLN--------GDPPPPDQVLGAGKLAVCHECPRKIEEKKIKRF--YRNHQMISD 225 >UniRef50_C0GED7 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GED7_9FIRM Length = 254 Score = 55.1 bits (131), Expect = 2e-06, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 46/163 (28%), Gaps = 37/163 (22%) Query: 34 AYVYRVDCGGCNACEIEIFAA-----------ITPVFDAERFGIKVVSSPRHADILLFTG 82 V C+ C++E F R + P DI G Sbjct: 5 PKVAIFKFASCSGCQLEFLNLEPVLLDLLGLVDLTHFVMAR--RENKPGP--YDIGFVEG 60 Query: 83 AVTRAMRMPALRAYESAPDHKICVSYGACGVGGGI---------------FHDLYSVWG- 126 ++ R ++ D + V+ GAC GG+ ++ + Sbjct: 61 SIVNP--EDIERLKQARRDCGLLVAIGACACHGGLQSLNNGTPQREVEARVYEHPAEVSS 118 Query: 127 ----GSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHA 165 D V ID + GCP + AL + +I Sbjct: 119 LKSYPVDEYVDIDAKLSGCPINKNELVEFVKSALLGVTPRIRP 161 >UniRef50_Q0W6U0 Coenzyme F420-non-reducing hydrogenase (Methyl viologen-reducing hydrogenase), gamma subunit n=3 Tax=Euryarchaeota RepID=Q0W6U0_UNCMA Length = 306 Score = 55.1 bits (131), Expect = 2e-06, Method: Composition-based stats. Identities = 20/151 (13%), Positives = 41/151 (27%), Gaps = 39/151 (25%) Query: 89 RMPALRAYESAPDHKICVSYGACGVGGG------------IFHDLYSVWGG--------- 127 + R + K +++G C GG I + +Y+ G Sbjct: 63 KENMERVKKLRQRAKTVIAFGTCACYGGVSGLSILHSRDEILNGVYTNRQGTTTNVIPNQ 122 Query: 128 -----------SDTIVPIDVWIPGCPPTPAATIHGFAVALG----LLQQKIHAVDYRDPT 172 ++ +D +I GCPP + LQ+K + Sbjct: 123 DIPDLLYRGYAVGDVIKVDYYITGCPPKEFFLRQILLPLIEGRIPDLQKKSVCSECDREM 182 Query: 173 GVTMQPLWPQI---PPSQRIAIEREARRLAG 200 + + P ++ + + G Sbjct: 183 VLVKDWKIKRRYEGVPEEKTCLLGQGYICLG 213 >UniRef50_A4YF94 NADH ubiquinone oxidoreductase, 20 kDa subunit n=8 Tax=cellular organisms RepID=A4YF94_METS5 Length = 322 Score = 54.7 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 42/142 (29%), Gaps = 31/142 (21%) Query: 76 DILLFTGAV--------TRAM---RMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSV 124 DILLF G++ T M + E AP V+ G C GGI + Sbjct: 67 DILLFEGSIVRGPAGKGTFNMFAGKPMMWWVREIAPQANYIVAVGDCASFGGIPAADPNP 126 Query: 125 WG---------------GSD----TIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHA 165 G D + +P+ + + GCP P I + L + Sbjct: 127 TESTGLQFHRKEMSGFLGKDFRCKSGLPV-INLSGCPVHPEWLITTLTLILRGEMNQEML 185 Query: 166 VDYRDPTGVTMQPLWPQIPPSQ 187 ++ P P Sbjct: 186 DEFNRPRIFYATTTQFGCPRQP 207 >UniRef50_B5IEA4 NADH ubiquinone oxidoreductase, 20 Kd subunit family n=2 Tax=Aciduliprofundum boonei T469 RepID=B5IEA4_9EURY Length = 248 Score = 54.3 bits (129), Expect = 4e-06, Method: Composition-based stats. Identities = 26/189 (13%), Positives = 50/189 (26%), Gaps = 42/189 (22%) Query: 39 VDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHA--------DILLFTGAVTRAMRM 90 C C ++ + E +++ R A +I G T Sbjct: 6 FSLSCCEGCSVQFLNLENEI--LEILKYMGINNFRLAKEINEWPVEIAFVEGTPTNRDE- 62 Query: 91 PALRAYESAPDHKICVSYGACGVGGGI--------FHDLYSVWGGSDTIVP--------- 133 ++ + KI V+ G C GG+ + ++ G +P Sbjct: 63 -IIKLLKIRKYSKILVALGTCAATGGVPAIVNTLEKKEAMKIYNGVPPKIPIDAKQLKYY 121 Query: 134 --IDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQRIAI 191 +D + GCP + L L + Y + + + + Sbjct: 122 VDVDYILYGCPFSKEELKELITSVL--LGKGFRNKRYS---------VCVECTLRENGCL 170 Query: 192 EREARRLAG 200 E G Sbjct: 171 LEEGYLCMG 179 >UniRef50_C3XGH6 Ni/Fe-hydrogenase small subunit n=8 Tax=Proteobacteria RepID=C3XGH6_9HELI Length = 425 Score = 53.9 bits (128), Expect = 5e-06, Method: Composition-based stats. Identities = 22/189 (11%), Positives = 45/189 (23%), Gaps = 39/189 (20%) Query: 39 VDCGGCNACEIEIFAAITPVFD--------AERFGIKVVSSPRHAD-------------- 76 + C C + + P D E + +S A+ Sbjct: 125 LHMAECTGCSESLLRSEDPCIDSIIFDYVSMEYHETIMAASGYQAEKSLEDAVKKYDGRY 184 Query: 77 ILLFTGAVTRAMRMPA----------LRAYESAPDHKICVSYGACGVGGGIFH--DLYSV 124 +++ G + + A + G C GG+ + Sbjct: 185 VMMVEGGIPKDTEYFLTIGASGRTGAEECRHVAKHAAAIFAIGTCSSFGGVQAAAPNPTN 244 Query: 125 WGGSDTIV--PIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQ 182 I+ + + +PGCPP + +L + + P + Sbjct: 245 AHPLSDIIDKKV-INVPGCPPNEKNIVGTLM--QHILFGDMALDAFHRPKWAYGHRIHDL 301 Query: 183 IPPSQRIAI 191 R Sbjct: 302 CERRGRFDA 310 >UniRef50_C2KSS0 Hydrogenase (Acceptor) n=3 Tax=Bacteria RepID=C2KSS0_9ACTO Length = 423 Score = 53.9 bits (128), Expect = 5e-06, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 40/132 (30%), Gaps = 16/132 (12%) Query: 74 HADILLFTGAVTRAM---------RMPALRAYESAPDHKICVSYGACGVGGGIF--HDLY 122 IL+ G++ + ESA + + ++ GAC V G + Sbjct: 142 QDHILVVNGSIPVKDGGIYCTIGGKSAQQVLEESAENASMILAVGACAVYGSVQAARPNP 201 Query: 123 SVWGGSDTIV---PIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPL 179 + G D I+ P+ + + GCPP A L + P Q + Sbjct: 202 TGAVGVDEIIKDKPV-INVAGCPPIGEVITATLAYILTK-GKAPELDAEGRPLFAYGQRI 259 Query: 180 WPQIPPSQRIAI 191 P Sbjct: 260 HDSCPRRPHFDA 271 >UniRef50_B2TM84 [Ni/Fe] hydrogenase, small subunit n=2 Tax=Clostridium botulinum RepID=B2TM84_CLOBB Length = 313 Score = 53.9 bits (128), Expect = 5e-06, Method: Composition-based stats. Identities = 33/211 (15%), Positives = 59/211 (27%), Gaps = 43/211 (20%) Query: 17 EQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITP--------VFDAERFGIKV 68 E K + + ++ GC I + + P + + FG Sbjct: 34 EMIDKATEEIKARNKEKINAIWLETSGCFGEVISLLNSEMPDLPFVLKNLVNMTFFGSIC 93 Query: 69 --------------VSSPRHADILLFTGAVTRAMR--------------MPALRAYESAP 100 ++S + ILL GA+ ++A Sbjct: 94 GDQGEKAYERILDTLNSDKEY-ILLVCGAIPINADGLYTVLATYQGRKITAMELVKQAAQ 152 Query: 101 DHKICVSYGACGVGGGIFHDLYSVWGGS---DTIVPID-VWIPGCPPTPAATIHGFAVAL 156 K +S G C GG +V + ++ D + IPGCP P T+ + Sbjct: 153 KAKYIISIGTCACYGGPTAAKPNVSQALSVKEYLMRNDIINIPGCPANPVWTLGTVGYLI 212 Query: 157 GLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQ 187 I + P + + P + Sbjct: 213 N--YGTIDLDEEGRPVAFYGKTIHEICPKRK 241 >UniRef50_D2LGK5 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LGK5_RHOVA Length = 358 Score = 53.5 bits (127), Expect = 6e-06, Method: Composition-based stats. Identities = 36/243 (14%), Positives = 61/243 (25%), Gaps = 58/243 (23%) Query: 13 ITLDEQTQKMKRHLLQDIRRS--AYVYRVDCGGCNACEIEIFAAITP----VFDAERFGI 66 + D ++ R + + GGC C + + A +P D R + Sbjct: 1 MARDLPCDPVRNVARDATGRPARLSLLWLQSGGCGGCSMSLLNADSPDLFAALDLGRIDV 60 Query: 67 KVVSSPRHA-------------------DILLFTGAVTRAM-------------RMPALR 94 S A DIL GA+ R + Sbjct: 61 LAHPSLSEASGEDYHALIARILSGQQPLDILCVEGAILRGPNGTGRFHLQPGTGKPVMQL 120 Query: 95 AYESAPDHKICVSYGACGVGGGIFHDLYSVW------------GGS-------DTIVPID 135 E A ++ G+C GG+ +V GG + +P Sbjct: 121 VAELAACAGHVIAIGSCTAYGGVSAAGDNVTEACGLAFEGAEPGGLLGPGFRSHSGLPA- 179 Query: 136 VWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIEREA 195 + I GCP P + Y P + ++ + A Sbjct: 180 INIAGCPTHPGWIVETLVQLGDGTFSASDLDTYGRPRFYADHLVHHGCTRNEFYEYKASA 239 Query: 196 RRL 198 + Sbjct: 240 KEP 242 >UniRef50_B5EQ53 NADH ubiquinone oxidoreductase 20 kDa subunit n=10 Tax=Proteobacteria RepID=B5EQ53_ACIF5 Length = 265 Score = 53.1 bits (126), Expect = 8e-06, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 44/159 (27%), Gaps = 38/159 (23%) Query: 41 CGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHA-----------DILLFTGAVTRAMR 89 C+ C++ D R ++V A DI G+V+ Sbjct: 13 FSSCDGCQLAFLNLGE---DLLRL-AELVEIVHFAEAGPVDPDAVVDIAFVEGSVSTPED 68 Query: 90 MPALRAYESAPDHKICVSYGACGVGGG----------------IFHD-----LYSVWGGS 128 R + + + +S GAC GG I+ + Sbjct: 69 EE--RIQKIRKNSRHLISIGACATAGGLQALRNLADGPGWIAEIYAQPEHIHSLATSTPI 126 Query: 129 DTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVD 167 VP+D+ + GCP + L + + Sbjct: 127 AAHVPVDLELWGCPVNGRQVLGAVRALLFEVVPALEKDK 165 >UniRef50_B1ZXG1 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZXG1_OPITP Length = 334 Score = 52.7 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 45/182 (24%), Gaps = 59/182 (32%) Query: 33 SAYVYRVDCGGCNACEIEIFAAITPVFD-AERFGIKVVSSP-----RHADIL-------- 78 V C C CE I + E I + D L Sbjct: 3 KPKVAFYWCAACGGCEEAIVDFAEDILGVIEAVDIVFWPVAMDFKKKDVDALPDQGITAT 62 Query: 79 LFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGI--------------------- 117 GA+ + + + + ++YGAC GGI Sbjct: 63 FLNGAIRTSEQEEMAQLLRR--KSQFLIAYGACAHLGGIPGLANQFDREQLLSYVYEQTP 120 Query: 118 ----------------------FHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVA 155 + D +V +D +IPGCPPTP T Sbjct: 121 TIDNPTHVRPQPAHQNNGHSLTLPEFRHTVRSLDQVVAVDYYIPGCPPTPKITKAAITAL 180 Query: 156 LG 157 L Sbjct: 181 LE 182 >UniRef50_O33405 Uptake hydrogenase small subunit n=221 Tax=Bacteria RepID=MBHS_OLICO Length = 360 Score = 52.7 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 19/129 (14%), Positives = 36/129 (27%), Gaps = 16/129 (12%) Query: 77 ILLFTGAVTRAM---------RMPALRAYESAPDHKICVSYGACGVGGGIF--HDLYSVW 125 IL G + + +A K +S+G+C G + + Sbjct: 117 ILAVEGNPPLNEDGMFCIIGGKPFVDQLRYAAKHAKAIISWGSCASHGCVQAARPNPTRA 176 Query: 126 GGSDTIV---PIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQ 182 ++ PI + +PGCPP + G + + P Q + + Sbjct: 177 TPVHQVITDKPI-IKVPGCPPIAE-VMTGVITYMLTFGKLPELDRTGRPKMFYSQRIHDK 234 Query: 183 IPPSQRIAI 191 Sbjct: 235 CYRRPHFDA 243 >UniRef50_A6QAV6 Ni-Fe hydrogenase, small subunit HupS n=3 Tax=Epsilonproteobacteria RepID=A6QAV6_SULNB Length = 298 Score = 52.7 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 48/155 (30%), Gaps = 29/155 (18%) Query: 75 ADILLFTGAVTRA-------MRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYS---- 123 D+L+ GA L+ Y A K +S G C GGIF + Sbjct: 61 CDLLIVEGAFKEEGFLKSGVEVSSVLKKY--ADKAKYIISAGTCATFGGIFKENDPEEIS 118 Query: 124 --VWGGSDTIVPIDVW------IPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVT 175 + G + + + +PGCP P + + K+ P + Sbjct: 119 GFCFDGEEKTPRYESYASKLISLPGCPIHPRWLSYLLLMIAS--GNKVPLDTLHRPVELY 176 Query: 176 MQPLWPQIPPSQRIAIEREARR------LAGYRQG 204 + ++ + +A++ Y QG Sbjct: 177 GYTVHTGCTRNEYFEWKIDAKQFGVKEGCLFYEQG 211 >UniRef50_Q30QL6 Ni-Fe hydrogenase, small subunit n=2 Tax=Campylobacterales RepID=Q30QL6_SULDN Length = 293 Score = 52.7 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 22/157 (14%), Positives = 50/157 (31%), Gaps = 18/157 (11%) Query: 54 AITPVFDAERFGIKVVSSPRHADILLFTGAVTRAM----RMPALRAYESAPDHKICVSYG 109 PV D++ ++VS+ ++L+ GA++ + + ++ G Sbjct: 38 IYHPVIDSKYSLQEIVSNEIECEVLIIEGAISEEFQRGGVPIFEIIKNYSKRVQKILTVG 97 Query: 110 ACGVGGGIFHDL-YSVWGGSD-----------TIVPIDVWIPGCPPTPAATIHGFAVALG 157 C GGIF + Y G + + I GCP P ++ Sbjct: 98 TCATFGGIFRESDYKDTAGMHFDQDRALHNFSDFLDKTISISGCPIHPEVLVNTLYAIKK 157 Query: 158 LLQQKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIERE 194 + + ++ P + ++ + + Sbjct: 158 SVL--LRVDNFLRPKEFYAYTVHNGCTRNEYFEYKVD 192 >UniRef50_A6DCC1 NI/FE-HYDROGENASE SMALL SUBUNIT n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DCC1_9PROT Length = 369 Score = 52.0 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 38/132 (28%), Gaps = 19/132 (14%) Query: 77 ILLFTGAVTRAMRMPA-----------LRAYESAPDHKICVSYGACGVGGGIFHDLYSVW 125 +L G++ A A K ++ G C GG+ + Sbjct: 131 LLFVEGSIPLADNGVYGTIGPSGETYKDHLLRLASKAKAIIAVGNCASFGGVVAANPNPT 190 Query: 126 G-----GSDTI-VPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPL 179 G G D I VPI + +P CP P I G + L + + P + Sbjct: 191 GATGVMGVDGINVPI-INLPACPVNPETMI-GVLIMYALTGELPELDSLKRPLFAYASRI 248 Query: 180 WPQIPPSQRIAI 191 + Sbjct: 249 HDRCERRVHFDA 260 >UniRef50_B9L9V0 Hydrogenase n=1 Tax=Nautilia profundicola AmH RepID=B9L9V0_NAUPA Length = 306 Score = 51.2 bits (121), Expect = 3e-05, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 51/154 (33%), Gaps = 36/154 (23%) Query: 39 VDCGGCNACEIEIFAAITPVFD-AERF-GIKVVSSPRHAD----------------ILLF 80 + C+ C + A PV + RF I + +D IL+ Sbjct: 43 LQALSCDGCSVNFLNAEIPVTEILNRFANIVFHPTIMASDGKEAMDILMNYKSDNMILVV 102 Query: 81 TGAVTRAMRMPALR--------AYESAPDHKICVSYGACGVGGGI--FHDLYSVWGGSDT 130 GA+ AM + + A + K V+ G C GI ++Y+ G Sbjct: 103 EGAIPTAMPHACMMGEMFVNDIILKKAKEAKAIVAAGTCATFAGICDMKNMYTKAGSVKY 162 Query: 131 IV-------PIDVWIPGCPPTPAATIHGFAVALG 157 + P+ V +P CP P ++ + Sbjct: 163 FLETNNINTPV-VNLPTCPMKPKHLLYTLFYYIK 195 >UniRef50_D1U6F3 Hydrogenase (NiFe) small subunit HydA n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U6F3_9DELT Length = 328 Score = 51.2 bits (121), Expect = 3e-05, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 35/106 (33%), Gaps = 6/106 (5%) Query: 92 ALRAYESAPDHKICVSYGACGVGGGIFH--DLYSVWGGSDTIVPID--VWIPGCPPTPAA 147 + ++YG C GG+ + G D + P + +PGCPP P + Sbjct: 150 LENTTKVVEKALATITYGTCASYGGVQKAAPNPTACKGVDELFPGKPIINVPGCPPNPYS 209 Query: 148 TIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIER 193 + + ++ P + + P + +++ Sbjct: 210 LVGTIVYYVTKGVPEL--DSVGRPVAFYGESVHDNCPRQEFFNMDQ 253 >UniRef50_D2QHS8 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QHS8_9SPHI Length = 326 Score = 51.2 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 40/155 (25%), Gaps = 37/155 (23%) Query: 74 HADILLFTGAV--------TRA---MRMPALRAYESAPDHKICVSYGACGVGGGI----- 117 DIL++ G++ T R + + V+ G C GGI Sbjct: 65 QCDILVYEGSIIQGPNGTGTMNYFADRPMQDWVRDLSKVVGYVVAIGDCATWGGIPAVAP 124 Query: 118 -----------------FHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQ 160 F V G +P+ + IPGCP P Sbjct: 125 NPSESTGMQFLKKAKGGFLGSDYVSKGG---LPV-INIPGCPAHPDWITQILVAIATGRI 180 Query: 161 QKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIEREA 195 + +Y P + A + + Sbjct: 181 GDVLIDEYHRPKTFFTDFVQTGCTNVVSFAQKVDG 215 >UniRef50_Q31DZ5 Ni,Fe-hydrogenase small subunit n=4 Tax=Proteobacteria RepID=Q31DZ5_THICR Length = 813 Score = 51.2 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 37/130 (28%), Gaps = 16/130 (12%) Query: 77 ILLFTGAVTRAMRMPALRA-----------YESAPDHKICVSYGACGVGGGIFHDLYSVW 125 IL+ GAV M LR A ++ G+C GG+ + Sbjct: 606 ILIVEGAVPLGMGGNFLRIGPQGETGEALLKRVAQHASAVMAVGSCAFDGGVVAAAPNPT 665 Query: 126 G--GSDTIVPID--VWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWP 181 G G + D + +PGCP P + + + + D P + Sbjct: 666 GAVGVSEALGRDDIINLPGCPVNPINVVGTLLHYI-MFAEMPELGDNNKPVWAYAPRVHD 724 Query: 182 QIPPSQRIAI 191 Sbjct: 725 NCERRGHYDA 734 >UniRef50_P12635 Uptake hydrogenase small subunit n=8 Tax=Bacteria RepID=MBHS_BRAJA Length = 363 Score = 50.8 bits (120), Expect = 4e-05, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 36/129 (27%), Gaps = 16/129 (12%) Query: 77 ILLFTGAVTRAM---------RMPALRAYESAPDHKICVSYGACGVGGGIF--HDLYSVW 125 IL G + + A D +++GAC G + + Sbjct: 118 ILAVEGNPPLNEGGMFCIDGGKPFVEKLKMMAEDAMAIIAWGACASWGCVQAAKPNPTQA 177 Query: 126 GGSDTIV---PIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQ 182 D ++ PI + +PGCPP + G + + P Q + + Sbjct: 178 TPIDKVITNKPI-IKVPGCPPIAE-VMTGVVTFITTFGKLPELDRQGRPKMFYSQRIHDK 235 Query: 183 IPPSQRIAI 191 Sbjct: 236 CYRRPHFDA 244 >UniRef50_A5GFC8 Hydrogenase (NiFe) small subunit HydA n=6 Tax=Proteobacteria RepID=A5GFC8_GEOUR Length = 378 Score = 50.8 bits (120), Expect = 4e-05, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 42/134 (31%), Gaps = 16/134 (11%) Query: 77 ILLFTGAVTRAM---------RMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWG- 126 +L+ GA+ + +A + +S G C GGI + G Sbjct: 118 LLVVEGAIPTKESGIYCKVGGKTALESLQHAASNAAAIISIGTCASYGGIQSVGPNPTGA 177 Query: 127 -GSDTIVPID---VWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQ 182 G IV D + IPGCPP+P + L ++ P + + Sbjct: 178 VGVRDIVK-DKPIINIPGCPPSPYNLLSTVMYYLT-FKKIPELDALGRPKFAYGRKIHEH 235 Query: 183 IPPSQRIAIEREAR 196 R A+ Sbjct: 236 CERRPHFDAGRFAK 249 >UniRef50_A0L609 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L609_MAGSM Length = 282 Score = 50.4 bits (119), Expect = 5e-05, Method: Composition-based stats. Identities = 30/200 (15%), Positives = 53/200 (26%), Gaps = 43/200 (21%) Query: 32 RSAYVYRVDCGGCNACEIEIFAAITPVFDAE-RFGI--KVVSSPRHAD------ILLFTG 82 + V GC ++ I T + R I +++S + +D + + G Sbjct: 10 KKLRVGIYSFTGCAGDQLAILNDTTVLLGLAQRAEICSFIMASSQESDQEGRLDLAIVEG 69 Query: 83 AVTRAMRMPALRAYESAPDHKICVSYGACGVGGG-----------------IFHDL---- 121 ++ AL D ++ G C V GG ++ D Sbjct: 70 SICSEQERTALEKLRQRSDA--LMALGTCAVWGGLPAMNAKTIPIHTMKEQVYGDSTVFP 127 Query: 122 -YSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLW 180 V +D + GCP L ++ P Sbjct: 128 GAREAEPLSRFVKVDYAVTGCPIEIDEFAQVVTAILNGVR----------PVQTDASVCS 177 Query: 181 PQIPPSQRIAIEREARRLAG 200 R ++ E R G Sbjct: 178 ECRIAENRCLVQAERRVCCG 197 >UniRef50_B0TDW1 Uptake [ni/fe] hydrogenase small subunit n=11 Tax=Bacteria RepID=B0TDW1_HELMI Length = 395 Score = 50.1 bits (118), Expect = 7e-05, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 37/121 (30%), Gaps = 16/121 (13%) Query: 77 ILLFTGAVTRAM---------RMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWG- 126 IL GA+ R E A K +++G+C V G + + G Sbjct: 141 ILAVEGAIPVKDGGIYCCIAGRTAVDMLKEEAKHAKAIIAWGSCAVNGCVQAANPNPTGA 200 Query: 127 -GSDTIVPID---VWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQ 182 I+ D + +PGCP + G + ++ P + + Sbjct: 201 VPVQDIIK-DKPIINVPGCPAIAE-VMAGVITHVLTFERLPELDSQGRPKAFYGHRIHDK 258 Query: 183 I 183 Sbjct: 259 C 259 >UniRef50_C3XE47 Quinone-reactive Ni/Fe hydrogenase n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XE47_9HELI Length = 593 Score = 50.1 bits (118), Expect = 8e-05, Method: Composition-based stats. Identities = 27/152 (17%), Positives = 46/152 (30%), Gaps = 32/152 (21%) Query: 34 AYVYRVDCGGCNACEIEIFAAITPVFDAERFGIK---------------VVSSPRHAD-- 76 V + C C + TP F+ F I V++ HA+ Sbjct: 65 LKVVWLHLQECTGCSESLLRTETPSFEVLLFDIFKIVYHDLVMVSSGHGAVAALEHANSH 124 Query: 77 ---ILLFTGAVTRAMRMPALRA-----YESAPD----HKICVSYGACGVGGGIFHDLYSV 124 +LL G++ + Y+ + + G C GGI + Sbjct: 125 EKYVLLVEGSIPMGFAKDYITLGDRNGYDEISHLIHNAEAVFAIGTCSSFGGIQSAYPNP 184 Query: 125 WGG--SDTIVPIDV-WIPGCPPTPAATIHGFA 153 G I ++ +PGCPP+ + Sbjct: 185 TNGHALSEIFEREIINVPGCPPSDKNIVATLL 216 >UniRef50_A7BI79 Ni,Fe-hydrogenase small subunit n=2 Tax=Aquificaceae RepID=A7BI79_HYDTH Length = 345 Score = 49.7 bits (117), Expect = 8e-05, Method: Composition-based stats. Identities = 24/125 (19%), Positives = 43/125 (34%), Gaps = 16/125 (12%) Query: 77 ILLFTGAVTRAMRMP---------ALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWG- 126 IL+ G+V+ + E+A + + ++ G+C GGI H + G Sbjct: 114 ILIVEGSVSPRNKGVYCTVSGKSNVELLKEAAQNAGLVIAVGSCASWGGIPHAEPNPTGA 173 Query: 127 -GSDTIV---PIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQ 182 I+ + V IPGCPP + A + + + P Q + + Sbjct: 174 VPVSQILGDRQV-VNIPGCPPISDVMVAVIAGFV-ITGKPPELDSMGRPKTFYGQTIHDR 231 Query: 183 IPPSQ 187 Sbjct: 232 CYRRP 236 >UniRef50_A5I2W4 Hydrogenase small subunit n=13 Tax=Firmicutes RepID=A5I2W4_CLOBH Length = 290 Score = 49.7 bits (117), Expect = 9e-05, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 32/97 (32%), Gaps = 17/97 (17%) Query: 77 ILLFTGAVTRAM--RMPALRAYESAP------------DHKICVSYGACGVGGGI--FHD 120 ILL GAV+ + Y P K V+ G C GGI Sbjct: 97 ILLVDGAVSTKENGYYNIIANYRGRPVTALEAIKMAGEKAKYVVTVGTCSSYGGISAAKP 156 Query: 121 LYSVWGGSDTIV-PIDVWIPGCPPTPAATIHGFAVAL 156 S D ++ + +PGCP P + A + Sbjct: 157 NPSGSKSVDAVINKEVIKLPGCPCHPDWVVGTLAHLV 193 >UniRef50_Q7VJP5 Putative uncharacterized protein n=3 Tax=Helicobacter RepID=Q7VJP5_HELHP Length = 552 Score = 49.7 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 39/128 (30%), Gaps = 15/128 (11%) Query: 77 ILLFTGAVTR-AMRMPA----------LRAYESAPDHKICVSYGACGVGGGIFHDLYSVW 125 IL+ G V+ E A + + G C GG+ + Sbjct: 122 ILVIEGGVSLGNHAHFLTSGADSITGEEECKEVAQKAQAIFAVGTCSSFGGVQAAYPNPT 181 Query: 126 G--GSDTIVPIDV-WIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQ 182 G D+ + + IPGCPP+ A I + LLQ+ P + L Sbjct: 182 QSIGIDSFLSQRIINIPGCPPSEANIIGSILYYI-LLQELPPTDSLHRPIWSYGKNLHDM 240 Query: 183 IPPSQRIA 190 + Sbjct: 241 CERKAKFE 248 >UniRef50_Q5HT18 Hydrogenase, (NiFe)/(NiFeSe) small subunit family n=14 Tax=Campylobacter RepID=Q5HT18_CAMJR Length = 497 Score = 48.5 bits (114), Expect = 2e-04, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 49/170 (28%), Gaps = 36/170 (21%) Query: 16 DEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFD---AERFGIKVVSSP 72 +E +R + + C C + A P FD + F ++ + Sbjct: 47 NEIPALAQRFFQIAPKTKLVWLHLCE--CTGCSESLLRADLPSFDELVFDFFSLEYHETL 104 Query: 73 RHAD----------------ILLFTGAVTR---------AMRMPALRAYES-APDHKICV 106 A+ IL G V A E A K Sbjct: 105 MAANGTKAEELLEYVLEEDFILAVEGGVAAIDTFFLTIGAQGESGYEILEKLAAKAKAIF 164 Query: 107 SYGACGVGGGIF--HDLYSVWGGSDTIV--PIDVWIPGCPPTPAATIHGF 152 + G C GGI + S G ++ + V IPGCPP+ I Sbjct: 165 AVGTCSSYGGIQAAYPNPSKTCGISEVLSQKV-VNIPGCPPSDINIIATL 213 >UniRef50_P61429 Periplasmic [NiFe] hydrogenase small subunit 2 n=9 Tax=Desulfovibrio RepID=PHNS2_DESVH Length = 324 Score = 48.5 bits (114), Expect = 2e-04, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 30/103 (29%), Gaps = 8/103 (7%) Query: 97 ESAPDHKICVSYGACGVGGGIFHDLYSVWGGS---DTIVPID---VWIPGCPPTPAATIH 150 A K ++ G C GGI + G + + P + I GCPP P I Sbjct: 150 RVASGAKAVIAMGTCASFGGIQAAAPNPSGAIGVREALAPFGIQPINIAGCPPNPVNYIG 209 Query: 151 GFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIER 193 L ++ P + Q + + Sbjct: 210 TVVHLLTKGMPEL--DSAGRPKMFYGTTVHDQCERRKHFNADE 250 >UniRef50_Q24VQ2 Ni,Fe-hydrogenase small subunit n=2 Tax=Desulfitobacterium hafniense RepID=Q24VQ2_DESHY Length = 319 Score = 48.5 bits (114), Expect = 2e-04, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 33/95 (34%), Gaps = 13/95 (13%) Query: 65 GIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSV 124 G + R+ G + + +A + ++ G+C GGI ++ Sbjct: 128 GSIPTADSRYC---FVEG------KPFIEQFKLAAEKAEAVIAVGSCACYGGIPRAGFTG 178 Query: 125 WGGSDTI---VPIDVWIPGCPPTPAATIHGFAVAL 156 G+ + V + V +P CP P + L Sbjct: 179 AAGAQEVLEGVKV-VNLPSCPVKPDRLVGLLLYYL 212 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.309 0.135 0.375 Lambda K H 0.267 0.0413 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,440,035,710 Number of Sequences: 3077464 Number of extensions: 65226376 Number of successful extensions: 200716 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 506 Number of HSP's successfully gapped in prelim test: 141 Number of HSP's that attempted gapping in prelim test: 199426 Number of HSP's gapped (non-prelim): 741 length of query: 252 length of database: 1,040,396,356 effective HSP length: 126 effective length of query: 126 effective length of database: 652,635,892 effective search space: 82232122392 effective search space used: 82232122392 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (20.7 bits) S2: 91 (39.7 bits)