83 d1in4a2 Probab=96.92   E-value=0.031  Score=33.03  Aligned_columns=201  Identities=21%

Q ss_pred             HCCCCHHHHHHHHHHHHHCC--CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHH
Q ss_conf             30049699999999998437--7789879999888888689999999999850346894499987733788658999999
Q batch____        22 EDRYGFGNIAENISRSILTL--PLEASNVVGIEGAWGSGKTSLLNLILRNLALKKDAHTHVLHISPWLSGGSPVEALFLP   99 (741)
Q Consensus        22 ~D~lgr~~~a~~la~~I~~~--~~~~~~vIgl~G~WGsGKTS~ln~~~~~L~~~~~~~~~vi~fnpW~~~~~~~~~l~~~   99 (741)
                      +|..|.....+.|...+...  ....+..+=++||=|+|||++.+.+.+++      +..++..++-....         
T Consensus         9 ~~iiG~~~~~~~l~~~i~~~~~~~~~~~~iLl~GppG~GKT~la~~ia~~l------~~~~~~~~~~~~~~---------   73 (223)
T d1in4a2           9 DEFIGQENVKKKLSLALEAAKMRGEVLDHVLLAGPPGLGKTTLAHIIASEL------QTNIHVTSGPVLVK---------   73 (223)
T ss_dssp             GGCCSCHHHHHHHHHHHHHHHHHTCCCCCEEEESSTTSSHHHHHHHHHHHH------TCCEEEEETTTCCS---------
T ss_pred             HHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHH------CCCEEEEEECCEEE---------
T ss_conf             780360999999999999987368757738997589978647999999984------89879984100011---------


Q ss_pred             HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
Q ss_conf             99999852012221246777888778888898898888877764201577787655577776555666666553046122
Q batch____       100 VATVIQQEMEIRYPPKGFKKLWRKYLLSPEAQKVIEYAQDTSSRVLPLVQYIGQFSSIINWIAGGIKVFSDSRLAVDQKT  179 (741)
Q Consensus       100 ~~~~L~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (741)
                                                                                                      
T Consensus        74 --------------------------------------------------------------------------------   73 (223)
T d1in4a2          74 --------------------------------------------------------------------------------   73 (223)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
T ss_conf             --------------------------------------------------------------------------------


Q ss_pred             HHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCCHHHHHHH
Q ss_conf             89999999999863298089997071138868999999999986268981799942989999998742366647889986
Q batch____       180 TTKLRAEIAGQLVSLDLKFIVVMDDLDRLEPSQVAEVFRLVRAVADLPRFTHILCYDRQIITHAVEHALNIEDGSRYLQK  259 (741)
Q Consensus       180 ~~~~k~~l~~~l~~~~~~iVViIDDLDRl~~~~i~~il~~Ik~~~d~pnvvfila~D~~~v~~al~~~~~~~~g~~YLeK  259 (741)
                          ...............++++|+++....+..-.+++.+.....-...++++....           .......=...
T Consensus        74 ----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~-----------~~~~~~~~~~~  138 (223)
T d1in4a2          74 ----QGDMAAILTSLERGDVLFIDEIHRLNKAVEELLYSAIEDFQIDIQPFTLVGATT-----------RSGLLSSPLRS  138 (223)
T ss_dssp             ----HHHHHHHHHHCCTTCEEEEETGGGCCHHHHHHHHHHHHTSCCCCCCCEEEEEES-----------CGGGSCHHHHT
T ss_pred             ----ECCCHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECC-----------CCCCCCCHHHH
T ss_conf             ----000012355530355011000002488899999999840100227806999606-----------85323402332


Q ss_pred             HCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH-CCCC
Q ss_conf             537637536889677999999999998753147873067877899999986454299899999988898774232-4867
Q batch____       260 IIQLSFKLPRPEAFDLRNEFRQRAEALYQQINNQPPDSGMVRDLIAVTDTYGAALSTPREIHQAINSLIFLYPGM-RDFV  338 (741)
Q Consensus       260 iIqv~~~lP~~~~~~l~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~i~tpR~ikr~~N~l~~~~~~~-~~eV  338 (741)
                      .....+.+++|...+...++...+..     .+...+.+....+.....+      ++|.+.+.+-.+....... .+++
T Consensus       139 ~~~~~~~~~~~~~~~~~~il~~~~~~-----~~~~~~~~~l~~i~~~~~g------~~R~~~~~l~~~~~~a~~~~~~~i  207 (223)
T d1in4a2         139 RFGIILELDFYTVKELKEIIKRAASL-----MDVEIEDAAAEMIAKRSRG------TPRIAIRLTKRVRDMLTVVKADRI  207 (223)
T ss_dssp             TCSEEEECCCCCHHHHHHHHHHHHHH-----TTCCBCHHHHHHHHHTSTT------CHHHHHHHHHHHHHHHHHHTCSSB
T ss_pred             HHHCCCCCCCCCHHHHHHHHHHHHHH-----CCCCCCHHHHHHHHHHCCC------CHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             10000224699989999999999986-----2899876899999997199------989999999999999997088987


Q ss_pred             CHHHH
Q ss_conf             88898
Q batch____       339 YFPDL  343 (741)
Q Consensus       339 ~~~dl  343 (741)
                      ...+.
T Consensus       208 t~~~v  212 (223)
T d1in4a2         208 NTDIV  212 (223)
T ss_dssp             CHHHH
T ss_pred             CHHHH
T ss_conf             98999