40 c1s3sA_ Probab=97.81   E-value=0.0017  Score=41.67  Aligned_columns=161  Identities=19%

Q ss_pred             HCCCCHHHHHHHHHHHH----------HCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC
Q ss_conf             30049699999999998----------43777898799998888886899999999998503468944999877337886
Q batch____        22 EDRYGFGNIAENISRSI----------LTLPLEASNVVGIEGAWGSGKTSLLNLILRNLALKKDAHTHVLHISPWLSGGS   91 (741)
Q Consensus        22 ~D~lgr~~~a~~la~~I----------~~~~~~~~~vIgl~G~WGsGKTS~ln~~~~~L~~~~~~~~~vi~fnpW~~~~~   91 (741)
                      +|.-|-....+.|.+.+          .....+.+..+=|+||=|+|||++++.+.+++      +.+++.+++...-+.
T Consensus       182 ~dIgGl~~~k~~l~~~i~~pl~~~~~~~~~g~~~~~~~Ll~Gp~G~GKt~l~~~ia~~~------~~~~~~i~~~~l~~~  255 (436)
T c1s3sA_         182 DDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANET------GAFFFLINGPEIMSK  255 (436)
T ss_dssp             GGCCSCHHHHHHHHHHHHHHHHCTTHHHHCCCCCCCEEEEECSTTSSHHHHHHHHHHHH------TCEEEEEEHHHHHTS
T ss_pred             HHHHCHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHC------CCCEEEEEHHHHCCC
T ss_conf             34205499999999999975018898974889987538986799899789999998744------995899730687001


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             58999999999998520122212467778887788888988988888777642015777876555777765556666665
Q batch____        92 PVEALFLPVATVIQQEMEIRYPPKGFKKLWRKYLLSPEAQKVIEYAQDTSSRVLPLVQYIGQFSSIINWIAGGIKVFSDS  171 (741)
Q Consensus        92 ~~~~l~~~~~~~L~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (741)
                      ..                                                                              
T Consensus       256 ~~------------------------------------------------------------------------------  257 (436)
T c1s3sA_         256 LA------------------------------------------------------------------------------  257 (436)
T ss_dssp             CT------------------------------------------------------------------------------
T ss_pred             CC------------------------------------------------------------------------------
T ss_conf             00------------------------------------------------------------------------------


Q ss_pred             HHCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC-----------CHHHHHHHHHHHHHHCCCCCEEEEEECCHHHH
Q ss_conf             5304612289999999999863298089997071138-----------86899999999998626898179994298999
Q batch____       172 RLAVDQKTTTKLRAEIAGQLVSLDLKFIVVMDDLDRL-----------EPSQVAEVFRLVRAVADLPRFTHILCYDRQII  240 (741)
Q Consensus       172 ~~~~~~~~~~~~k~~l~~~l~~~~~~iVViIDDLDRl-----------~~~~i~~il~~Ik~~~d~pnvvfila~D~~~v  240 (741)
                           ..+...++.-+...  ....|-||+|||+|.+           ...-+..++..+...-+.+++++|-+++.   
T Consensus       258 -----g~~e~~l~~~f~~a--~~~~p~ii~lDeid~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vi~tt~~---  327 (436)
T c1s3sA_         258 -----GESESNLRKAFEEA--EKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNR---  327 (436)
T ss_dssp             -----THHHHHHHHHHHHH--HHTCSEEEEEETGGGTCCCSSSCCCTTHHHHHHHHHHHHHHCCGGGCEEEEEEESC---
T ss_pred             -----CHHHHHHHHHHHHH--HHCCCCEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC---
T ss_conf             -----15888899999999--75099489840000321025788745889999999864302224698799984489---


Q ss_pred             HHHHHHHCCCCCHHHHHHHHCCCEEECCCCCHHHHHHHHHHHH
Q ss_conf             9998742366647889986537637536889677999999999
Q batch____       241 THAVEHALNIEDGSRYLQKIIQLSFKLPRPEAFDLRNEFRQRA  283 (741)
Q Consensus       241 ~~al~~~~~~~~g~~YLeKiIqv~~~lP~~~~~~l~~~~~~~l  283 (741)
                      ...+....-....       ++..+.+|.|+..+-..++...+
T Consensus       328 ~~~l~~~l~r~~r-------f~~~i~~~~P~~~~R~~Il~~~~  363 (436)
T c1s3sA_         328 PNSIDPALRRFGR-------FDREVDIGIPDATGRLEILQIHT  363 (436)
T ss_dssp             GGGSCGGGTSTTS-------SCEEEECCCCCHHHHHHHHHHTT
T ss_pred             HHHCCHHHHCCCC-------CEEEEECCCCCHHHHHHHHHHHH
T ss_conf             5888824204240-------30366678989999999999984