36 c1in8A_ Probab=97.82   E-value=0.0029  Score=40.18  Aligned_columns=201  Identities=21%

Q ss_pred             HCCCCHHHHHHHHHHHHHCC---CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHH
Q ss_conf             30049699999999998437---778987999988888868999999999985034689449998773378865899999
Q batch____        22 EDRYGFGNIAENISRSILTL---PLEASNVVGIEGAWGSGKTSLLNLILRNLALKKDAHTHVLHISPWLSGGSPVEALFL   98 (741)
Q Consensus        22 ~D~lgr~~~a~~la~~I~~~---~~~~~~vIgl~G~WGsGKTS~ln~~~~~L~~~~~~~~~vi~fnpW~~~~~~~~~l~~   98 (741)
                      +|..|+...-+.|...|...   ..+.+.++ |+||=|+|||++.+.+.+.+      +..+++++.-....        
T Consensus         9 ~d~iG~e~~~~~L~~~i~~~~~~~~~~~~il-l~GppGtGKT~la~~ia~~l------~~~~~~i~~~~~~~--------   73 (298)
T c1in8A_           9 DEFIGQENVKKKLSLALEAAKMRGEVLDHVL-LAGPPGLGKTTLAHIIASEL------QTNIHVTSGPVLVK--------   73 (298)
T ss_dssp             GGCCSCHHHHHHHHHHHHHHHHHTCCCCCEE-EESSTTSSHHHHHHHHHHHH------TCCEEEEETTTCCS--------
T ss_pred             HHHCCHHHHHHHHHHHHHHHHHCCCCCCCEE-EECCCCCCHHHHHHHHHHHC------CCCEEEEECCCCCC--------
T ss_conf             7812709999999999999863388888579-98698898889999999970------99799994155332--------


Q ss_pred             HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
Q ss_conf             99999985201222124677788877888889889888887776420157778765557777655566666655304612
Q batch____        99 PVATVIQQEMEIRYPPKGFKKLWRKYLLSPEAQKVIEYAQDTSSRVLPLVQYIGQFSSIINWIAGGIKVFSDSRLAVDQK  178 (741)
Q Consensus        99 ~~~~~L~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (741)
                                                                                                      
T Consensus        74 --------------------------------------------------------------------------------   73 (298)
T c1in8A_          74 --------------------------------------------------------------------------------   73 (298)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
T ss_conf             --------------------------------------------------------------------------------


Q ss_pred             HHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCCHHHHHH
Q ss_conf             28999999999986329808999707113886899999999998626898179994298999999874236664788998
Q batch____       179 TTTKLRAEIAGQLVSLDLKFIVVMDDLDRLEPSQVAEVFRLVRAVADLPRFTHILCYDRQIITHAVEHALNIEDGSRYLQ  258 (741)
Q Consensus       179 ~~~~~k~~l~~~l~~~~~~iVViIDDLDRl~~~~i~~il~~Ik~~~d~pnvvfila~D~~~v~~al~~~~~~~~g~~YLe  258 (741)
                           ...+.........+-|+++|++|++.++..-.++..+-..........+....           ........-..
T Consensus        74 -----~~~~~~~~~~~~~~~il~~dei~~l~~~~~~~l~~~l~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~  137 (298)
T c1in8A_          74 -----QGDMAAILTSLERGDVLFIDEIHRLNKAVEELLYSAIEDFQIDIQPFTLVGAT-----------VRSGLLSSPLR  137 (298)
T ss_dssp             -----HHHHHHHHHTCCTTCEEEEETGGGCCHHHHHHHHHHHHHSCCCCCCCEEEEEE-----------SCGGGSCHHHH
T ss_pred             -----CHHHHHHHHHHCCCCEEEEEEHHHCCHHHHHHHHHHHHCCCCCCCEEEECCCC-----------CCHHHCCCHHH
T ss_conf             -----01245668851379989994236769899999999970553344406652654-----------58563146433


Q ss_pred             HHCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             65376375368896779999999999987531478730678778999999864542998999999888987742324867
Q batch____       259 KIIQLSFKLPRPEAFDLRNEFRQRAEALYQQINNQPPDSGMVRDLIAVTDTYGAALSTPREIHQAINSLIFLYPGMRDFV  338 (741)
Q Consensus       259 KiIqv~~~lP~~~~~~l~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~i~tpR~ikr~~N~l~~~~~~~~~eV  338 (741)
                      .-+...+.++++.......++...+..     .+...+......+.....+      +||++.+.+..+.........+.
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~i~~~~~g------~~R~~~~ll~~~~~~~~~~~~~~  206 (298)
T c1in8A_         138 SRFGIILELDFYTVKELKEIIKRAASL-----MDVEIEDAAAEMIAKRSRG------TPRIAIRLTKRVRDMLTVVKADR  206 (298)
T ss_dssp             TTCSEEEECCCCCHHHHHHHHHHHHHH-----TTCCBCHHHHHHHHHTSTT------CHHHHHHHHHHHHHHHHHHTCSS
T ss_pred             HHHHHHCCCCCCCHHHHHHHHHHHHHH-----CCCCCCHHHHHHHHHHCCC------CHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             234431136789899999999999998-----2985588999999998399------98999999999999998529887


Q ss_pred             CHHHHH
Q ss_conf             888988
Q batch____       339 YFPDLC  344 (741)
Q Consensus       339 ~~~dl~  344 (741)
                      -..+.+
T Consensus       207 i~~~~i  212 (298)
T c1in8A_         207 INTDIV  212 (298)
T ss_dssp             BCHHHH
T ss_pred             CCHHHH
T ss_conf             698999