 |
| Job Description | P10805 | | Confidence | 45.65% | Date | Thu Jan 5 11:32:20 GMT 2012 |
| Rank | 424 | Aligned Residues | 46 |
| % Identity | 9% | Template | d1hw1a1 |
| SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| GntR-like transcriptional regulators
|
| Resolution | 1.50 |
|
|   |   |
140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | |
|
|
. | 160 | . | . | . | |
. | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . |
|
|
|
|
| . |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
M | Y | I | L | R | S | S | V | R | D | S | V | C | R | I | I | Q | S | D | . |
. |
. |
I | Q | H | Y | W | . |
N | L | R | I | V | A | S | S | L | C | L | S | P | S | L | L | K | K | K | L | K | N |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   | . | . | . |   |   |   |   |   | . |
|
|   |   |
|
|   |   |   |   |   |
|   |   |   |
|   |
|   |
|
|   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |
|   |   |
|
|
|   |   |   |
|
|   |   |   |   |
|
|   |   |
|
|
|   |
|
|   |   |
| Template Sequence |   |
A | Q | S | P | A | G | F | A | E | E | Y | I | I | E | S | I | W | N | N | R | F | P | P | G | T | I | L | P | A | E | R | E | L | S | E | L | I | G | V | T | R | T | T | L | R | E | V | L | Q | R |
| Template Known Secondary structure |   |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S |
| T | T | S | B |
|
|
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|