BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (259 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P45753 Uncharacterized protein yrfD n=83 Tax=Enterobact... 526 e-148 UniRef50_A4WFI3 Putative uncharacterized protein n=2 Tax=Enterob... 254 2e-66 UniRef50_B5XTU1 HofM protein n=5 Tax=Klebsiella RepID=B5XTU1_KLEP3 213 6e-54 UniRef50_C9Y279 Uncharacterized protein yrfD n=2 Tax=Cronobacter... 181 2e-44 UniRef50_C6C803 Putative uncharacterized protein n=5 Tax=Enterob... 99 1e-19 UniRef50_D0FX05 Conserved uncharacterized protein n=4 Tax=Entero... 92 2e-17 UniRef50_C6CH35 Putative uncharacterized protein n=3 Tax=Enterob... 80 8e-14 UniRef50_Q1CCN3 Type IV pilus biogenesis protein PilM n=35 Tax=E... 63 8e-09 UniRef50_Q7NA51 Similar to unknown protein YrfD of Escherichia c... 61 3e-08 UniRef50_B2Q5V1 Putative uncharacterized protein n=4 Tax=Provide... 54 6e-06 UniRef50_C5BGR0 Putative uncharacterized protein n=2 Tax=Edwards... 54 7e-06 >UniRef50_P45753 Uncharacterized protein yrfD n=83 Tax=Enterobacteriaceae RepID=YRFD_ECOLI Length = 259 Score = 526 bits (1356), Expect = e-148, Method: Compositional matrix adjust. Identities = 259/259 (100%), Positives = 259/259 (100%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL Sbjct: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 Query: 61 PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD 120 PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD Sbjct: 61 PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD 120 Query: 121 YSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLAW 180 YSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLAW Sbjct: 121 YSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLAW 180 Query: 181 RDNEQWLWATRYSWGRKLAVGMTSAKELAAALSVDPESVAICGEGGFDPWEAVSVRQPPL 240 RDNEQWLWATRYSWGRKLAVGMTSAKELAAALSVDPESVAICGEGGFDPWEAVSVRQPPL Sbjct: 181 RDNEQWLWATRYSWGRKLAVGMTSAKELAAALSVDPESVAICGEGGFDPWEAVSVRQPPL 240 Query: 241 PPPGGDFAIALGLALGKAY 259 PPPGGDFAIALGLALGKAY Sbjct: 241 PPPGGDFAIALGLALGKAY 259 >UniRef50_A4WFI3 Putative uncharacterized protein n=2 Tax=Enterobacter RepID=A4WFI3_ENT38 Length = 260 Score = 254 bits (649), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 123/256 (48%), Positives = 173/256 (67%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 MAFK W+ G+H+QQ +AV + + L+RWW++PL II+DG+I++ +QL L Sbjct: 1 MAFKTWRTGVHIQQDRVLAVCLTKERTGWNLRRWWQIPLHPGIIRDGQIIEPEQLVAALR 60 Query: 61 PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD 120 WS+ LPQ H I LAFPA+RTLQ++ P P+++L E EQ +W++ M+REL+M PD+L FD Sbjct: 61 AWSKVLPQHHRIFLAFPAARTLQKALPCPALNLRESEQASWIASAMSRELEMAPDALCFD 120 Query: 121 YSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLAW 180 Y +D+L+ +++VTAAQ+KE+A LLTLA+ LR+HV+AITPDA AL L L C W Sbjct: 121 YVQDTLTRSFHVTAAQNKEVAALLTLAKTLRLHVAAITPDAGALVNLLLLLAPPAHCAVW 180 Query: 181 RDNEQWLWATRYSWGRKLAVGMTSAKELAAALSVDPESVAICGEGGFDPWEAVSVRQPPL 240 RD+ WLWATR+ WGRK + +L+A L++ PE +A+ DP+ VS P L Sbjct: 181 RDDHHWLWATRHQWGRKPLTEAGTVADLSAILALKPEDMALFAADNLDPFTLVSRNLPSL 240 Query: 241 PPPGGDFAIALGLALG 256 P G DF +AL LA+G Sbjct: 241 PDSGADFTVALALAMG 256 >UniRef50_B5XTU1 HofM protein n=5 Tax=Klebsiella RepID=B5XTU1_KLEP3 Length = 266 Score = 213 bits (542), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 113/264 (42%), Positives = 153/264 (57%), Gaps = 8/264 (3%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 MAF+ W+IG+H+QQ VA++ L+RWWR+PL +++ G +VD L L Sbjct: 1 MAFRNWRIGMHIQQDSIAIVALLHERSHWALRRWWRIPLPPGLVRQGMVVDVSALGAQLS 60 Query: 61 PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD 120 W RELP +H + +AFPA RTLQ+ P P +L +REQ W++ M ++L M SL D Sbjct: 61 AWRRELPVQHQVSIAFPAVRTLQKRLPYPQFALRDREQATWIASAMTQQLAMPAASLSID 120 Query: 121 YSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLAW 180 Y+ S + VTAAQ ++ L LA RLR+ V+AI PDASAL F+P L Q LAW Sbjct: 121 YAPTSRDDGWQVTAAQRLDINVLRALAGRLRLRVAAIVPDASALGAFVPLLNPQSQGLAW 180 Query: 181 RDNEQWLWATRYSWGRKLAVGMTSAKELAAALSVDPESVAICGEGG-----FDPWEAVSV 235 RD WLWAT+ +WG + S +LA L V + +C + G D W+ + Sbjct: 181 RDENHWLWATQEAWGCVTCDEVKSLSQLAEQLQV---PLRLCADAGDEARNLDVWQVIHR 237 Query: 236 RQPPLPPPGGDFAIALGLALGKAY 259 RQPPLP G +AIALGLALG + Sbjct: 238 RQPPLPVDGDRYAIALGLALGSEH 261 >UniRef50_C9Y279 Uncharacterized protein yrfD n=2 Tax=Cronobacter RepID=C9Y279_CROTZ Length = 260 Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 110/260 (42%), Positives = 143/260 (55%), Gaps = 12/260 (4%) Query: 6 WQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRE 65 WQIGLH+Q ++VA+ QRWW LPL + R Q L + L PW + Sbjct: 6 WQIGLHIQPDIVISVALTPKRGGWRQQRWWALPLAPYHDDEQR---RQALIEALTPWRAQ 62 Query: 66 LPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDS 125 LP+ I L FPA RTLQR PRP +L E E AWL AR+L + PD+L FDY+E Sbjct: 63 LPRYSSIRLGFPAQRTLQRELPRPVTALCEPECEAWLGAVAARQLSLPPDALAFDYTES- 121 Query: 126 LSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLAWRDNEQ 185 Y VTAA++ E+A L A LR +A+TPDASAL F P++ + + + + Q Sbjct: 122 -QEGYAVTAARAVEVAELTACARALRFTPAALTPDASALACFFPYVDNTCKVIVAQAGAQ 180 Query: 186 WLWATRYSWGRKLAVGMTSAKELAAALSVDPESVAICG----EGG---FDPWEAVSVRQP 238 WLWATR WG G L L+V + + +CG EG FDPW+A++ P Sbjct: 181 WLWATRDRWGVCATPGAEGLLSLGVQLNVPAQEITLCGAIREEGDWQRFDPWQAITWPCP 240 Query: 239 PLPPPGGDFAIALGLALGKA 258 PLP G FA+A+GLALG A Sbjct: 241 PLPDERGRFAVAIGLALGAA 260 >UniRef50_C6C803 Putative uncharacterized protein n=5 Tax=Enterobacteriaceae RepID=C6C803_DICDC Length = 283 Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 88/285 (30%), Positives = 130/285 (45%), Gaps = 37/285 (12%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 MA+ +WQIG+ +Q A+A+ R L++WW+LPL D ++ G + + L L Sbjct: 1 MAYPVWQIGMDVQNGVLRALAVQRRRHGWQLRQWWQLPLPGDTLRGGSLHNPAALCAVLQ 60 Query: 61 PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD 120 W RELP + LAFPA R LQ+ P L E E+ ++ A++L + D+L FD Sbjct: 61 RWKRELPHYVSLRLAFPADRVLQQRLSEPDGRLREPERGWYIEKMAAKKLPVSSDALIFD 120 Query: 121 YSED-SLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLA 179 Y D +++ + VTAA+ ELA L + + A+ AL+ +HQ LA Sbjct: 121 YRIDPAVADSVLVTAARKAELALWLDCFRHAGLQLDAVDITPCALRCM-----AHQAGLA 175 Query: 180 ------WRDNEQWLWATRYSWGRKLAVG---MTSAKELAAALS-VDPESVAICGEGGF-- 227 R ++WLW + S LA G + A + +A LS V + E + Sbjct: 176 SDNMLVHRFEDRWLWIS--SLNAPLAFGTVHVDDAADFSALLSYVSAHYEPMASEPIYLS 233 Query: 228 -----------------DPWEAVSVRQPPLPPPGGDFAIALGLAL 255 P A S +QPPLP F IA GLA+ Sbjct: 234 TSAPDFLPEASSSFTLWSPLPAFSQQQPPLPAFPSAFVIAGGLAI 278 >UniRef50_D0FX05 Conserved uncharacterized protein n=4 Tax=Enterobacteriaceae RepID=D0FX05_ERWPY Length = 275 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 79/276 (28%), Positives = 125/276 (45%), Gaps = 27/276 (9%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 MAF+ WQ+GL +Q + A+ I R L+ WW+ L D +++G + L L Sbjct: 1 MAFETWQVGLDIQNGQLCALGIQRRRNGWQLRHWWQHALPQDTLRNGLVQRPDALVPLLK 60 Query: 61 PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD 120 W ++LP R + + FP +QR RP+ +L E +++ ++ R M P+ L D Sbjct: 61 LWRKQLPSRISLRVGFPPQLVMQRQLARPTAALREPDRSHYIIAAARRFFPMAPEELALD 120 Query: 121 Y-SEDSLSPAYNVTAAQSKELATLLTLAERLRV--HVSAITPDA-SALQRFLPFLPSHQQ 176 Y + + + +TAA+ + L + L +++ + V +TP A AL R L S Sbjct: 121 YRTGGDANGSLYLTAARQEALQSWLGCLQQVSLTPDVLELTPAALFALARSLGVDAS--A 178 Query: 177 CLAWRDNEQWLWAT----RYSWG-------------RKLAVGMTSAKELAAALSVDPESV 219 L R ++ WLW WG R+ +G +S ++AL+ Sbjct: 179 ALVHRLSDHWLWYAPQQHDRPWGWCPYAEAEDFHQLRQRFLGNSSTIWYSSALT----EA 234 Query: 220 AICGEGGFDPWEAVSVRQPPLPPPGGDFAIALGLAL 255 G P A+ QPPLP G FA+A GLAL Sbjct: 235 LPAGASALSPLAALRCYQPPLPAYDGAFALATGLAL 270 >UniRef50_C6CH35 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=C6CH35_DICZE Length = 292 Score = 80.1 bits (196), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 69/257 (26%), Positives = 110/257 (42%), Gaps = 32/257 (12%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 MA+ IWQ+GL +Q A+A+ R L+ WW+LPL + ++ G + +L L Sbjct: 1 MAYPIWQVGLDIQNGFIRAMAVQRRRYGWQLRHWWQLPLPDGTLRGGSLHHPTELCTVLR 60 Query: 61 PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD 120 W +ELP+ + L FPA R LQ+ P L E ++ ++ + L + D L D Sbjct: 61 QWRQELPRFVSLRLGFPAPRVLQQRLAMPDRRLREPQRGDYIRKMAVKALPVSGDDLALD 120 Query: 121 YSEDSLSPAY-NVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLA 179 Y D +P VTAA+ EL L + + + PDA + P +C+A Sbjct: 121 YRPDPQTPNMLLVTAARQTELDVWLHC-----LRDAGLQPDAVDIT------PCALRCMA 169 Query: 180 WRD------------NEQWLWATRYSWGRKLAVGMTSAKELAAA---LSVDPE---SVAI 221 R ++ WLW + LA G ++A + V+P+ V+ Sbjct: 170 ARAGLADDRLLLHRFDDHWLWVSPLK--APLAFGTFHPDDMADGATDIQVEPDLIKYVST 227 Query: 222 CGEGGFDPWEAVSVRQP 238 C + P +S P Sbjct: 228 CYQKEVPPVAYLSASTP 244 >UniRef50_Q1CCN3 Type IV pilus biogenesis protein PilM n=35 Tax=Enterobacteriaceae RepID=Q1CCN3_YERPN Length = 298 Score = 63.2 bits (152), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 37/141 (26%), Positives = 73/141 (51%), Gaps = 1/141 (0%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 M + WQ+GL +Q + A+A++R L+ WW L + ++++G + L++ L Sbjct: 1 MYSQYWQVGLDIQMEAIRALAVIRRRNGWQLRYWWHKILPSGVLREGILHQPDILSEQLK 60 Query: 61 PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD 120 ++LP+ + +A PA R LQ + P L E E+ ++ + +R ++ +L D Sbjct: 61 LLRKQLPRHISLRIALPAQRILQHTIHVPDRRLREPERDGFIKASASRLFPVNSQALALD 120 Query: 121 YSEDSL-SPAYNVTAAQSKEL 140 Y +++ S +TAA+ E+ Sbjct: 121 YCRETVASSELLITAARQSEV 141 >UniRef50_Q7NA51 Similar to unknown protein YrfD of Escherichia coli n=2 Tax=Photorhabdus RepID=Q7NA51_PHOLL Length = 276 Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 68/269 (25%), Positives = 116/269 (43%), Gaps = 22/269 (8%) Query: 6 WQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRE 65 W +GL +Q AVA ++ L+ W+ L + ++ +GR+ + L L W +E Sbjct: 6 WYVGLDIQNGILRAVAAIKRRDGWQLRHCWQYLLSDAVMPEGRLQRPEILCDILNQWRQE 65 Query: 66 LPQRHHIMLAFPASRTLQRSFPR-PSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSED 124 LP++ LA P +TLQ+S P ++L E EQ +++ + ++ + L DY Sbjct: 66 LPKKISFRLALPVQQTLQKSLILPPDINLKEPEQGWFINASAEKQFPFNTRELALDYRII 125 Query: 125 SLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPF--LPSHQQCLAWRD 182 + AY ++AA+ K+L L + + AI AL+ + +P+ L R Sbjct: 126 EQN-AY-ISAARQKDLNLWLQCLAQAGIFPDAIDIAPCALRYIAQYAGVPADSWLLH-RQ 182 Query: 183 NEQWLWAT----RYSWGRKLAVGMTSAKELAAALSVDP------------ESVAICGEGG 226 WLW + +++ A S +++ LS + G Sbjct: 183 QSGWLWVSPANAPFAYDLVSANTAVSPQQIIRQLSASSMAEQPVYYSSYQQEALPEGTYS 242 Query: 227 FDPWEAVSVRQPPLPPPGGDFAIALGLAL 255 +D A QPPLP ++ IA GLAL Sbjct: 243 WDMLTAFRHYQPPLPIQLMEYVIAGGLAL 271 >UniRef50_B2Q5V1 Putative uncharacterized protein n=4 Tax=Providencia RepID=B2Q5V1_PROST Length = 286 Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 67/276 (24%), Positives = 112/276 (40%), Gaps = 27/276 (9%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 M + W IG+ L Q VA + K +L W+ + N+I + L K L+ Sbjct: 7 MYSQKWNIGIDLCQASIQLVATKQNRKRRYLCECWQHNIPNEITSQSEHDRYEMLLKILI 66 Query: 61 PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMAREL-DMDPDSLRF 119 W R+LP+ + +AF A RTL++ P ++ + W + A +L + + L Sbjct: 67 QWRRKLPKNCQVSMAFSALRTLKQQVTLPEQVTLKQPELGWYLQSCAEKLFPLSSEDLVI 126 Query: 120 DYSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPF--LPSHQQC 177 DY + AY + + E+ L ++AI L+ + LP Sbjct: 127 DYRVID-NRAY-LNGVRKSEIVFWQNLLHDSGFLLTAIDVAPCVLRYIARYAGLPDESWL 184 Query: 178 LAWRDNEQWLWATRYS----WGRKLAVGMTSAKELAAALSVD--PESVAICGEGGFDPWE 231 + +R E WLW S + + +T+ ++ A L+ + P + + G + Sbjct: 185 IHYRQGE-WLWTGPVSQPATYNQIQENDITTLPQIIALLNENNGPLKLPLYYIGDHHKSQ 243 Query: 232 AV------------SVRQPPLPPPGGDFAIALGLAL 255 AV +VR LP GDF +A GLAL Sbjct: 244 AVHSWSLLQAFHNHTVR---LPHQLGDFVVATGLAL 276 >UniRef50_C5BGR0 Putative uncharacterized protein n=2 Tax=Edwardsiella RepID=C5BGR0_EDWI9 Length = 276 Score = 53.5 bits (127), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 72/272 (26%), Positives = 111/272 (40%), Gaps = 22/272 (8%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 M W++G+ +Q + VAVA+ L+ WWRLPL D +DG + L TL Sbjct: 1 MGGGHWRLGIDIQPAQLVAVALSARRDGIQLRGWWRLPLTADPDRDGL---SPSLPATLT 57 Query: 61 PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD 120 LP+R + AFPA R ++ P ++ L ++ L R+L + L D Sbjct: 58 TLRARLPRRLSVRAAFPAERAIRDMLPGSTLPLTPWQRHRLLLAQGERQLMLPAHQLACD 117 Query: 121 YSEDSLSPA-YNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFL-PSHQQCL 178 ++ + V A + L + + + +T AL+R S L Sbjct: 118 FAPAPEGGGRWQVCAVHRAQRDRWCALFDSAGLPLQRLTLAPCALRRLARLAGESPAAPL 177 Query: 179 AWRDNEQWLWATRYSWGRKLAVGMTSAKE-----LAAALSVDPESVA------ICG-EGG 226 + D ++ W WG L G S + A A++ P VA CG + G Sbjct: 178 IYGDGYRFCWIA--PWGSPLQYGFVSLSDGPEAACAQAVAALPPGVADGVAPLHCGSDSG 235 Query: 227 FDPWEAV-SVRQ--PPLPPPGGDFAIALGLAL 255 W + +VR PLP F +ALGLA+ Sbjct: 236 HRGWSGLRAVRHLVSPLPADPAAFCLALGLAV 267 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P45753 Uncharacterized protein yrfD n=83 Tax=Enterobact... 309 5e-83 UniRef50_A4WFI3 Putative uncharacterized protein n=2 Tax=Enterob... 285 9e-76 UniRef50_B5XTU1 HofM protein n=5 Tax=Klebsiella RepID=B5XTU1_KLEP3 272 7e-72 UniRef50_C9Y279 Uncharacterized protein yrfD n=2 Tax=Cronobacter... 256 5e-67 UniRef50_Q7NA51 Similar to unknown protein YrfD of Escherichia c... 256 7e-67 UniRef50_C6C803 Putative uncharacterized protein n=5 Tax=Enterob... 255 1e-66 UniRef50_B2Q5V1 Putative uncharacterized protein n=4 Tax=Provide... 250 5e-65 UniRef50_C6CH35 Putative uncharacterized protein n=3 Tax=Enterob... 245 2e-63 UniRef50_D0FX05 Conserved uncharacterized protein n=4 Tax=Entero... 236 7e-61 UniRef50_Q1CCN3 Type IV pilus biogenesis protein PilM n=35 Tax=E... 228 1e-58 UniRef50_C5BGR0 Putative uncharacterized protein n=2 Tax=Edwards... 209 1e-52 Sequences not found previously or not previously below threshold: UniRef50_D2U382 Putative uncharacterized protein n=1 Tax=Arsenop... 152 1e-35 UniRef50_B4F032 Putative uncharacterized protein n=4 Tax=Proteus... 74 4e-12 UniRef50_C9NLF2 Type IV pilus biogenesis protein PilM n=1 Tax=Vi... 70 7e-11 UniRef50_Q31KD6 Type IV pilus assembly protein PilM n=2 Tax=Syne... 67 7e-10 UniRef50_Q7NZT8 Type 4 fimbrial biogenesis protein PilM n=2 Tax=... 66 1e-09 UniRef50_A9GGQ6 Tfp pilus assembly protein, ATPase PilM n=1 Tax=... 65 3e-09 UniRef50_A6FBL4 Type IV pilus biogenesis protein PilM n=1 Tax=Mo... 64 6e-09 UniRef50_Q1IRM9 Type IV pilus assembly protein PilM n=1 Tax=Cand... 63 8e-09 UniRef50_A1SRB1 Type IV pilus assembly protein PilM n=2 Tax=Psyc... 63 1e-08 UniRef50_D0M6E3 Type IV pilus biogenesis protein PilM n=20 Tax=V... 62 2e-08 UniRef50_Q1IGB2 Putative type IV pili biogenesis protein PilM n=... 61 4e-08 UniRef50_B7VLK2 Tfp pilus assembly protein, ATPase PilM n=32 Tax... 61 4e-08 UniRef50_A0LUH5 Type IV pilus assembly protein PilM n=2 Tax=Acti... 61 4e-08 UniRef50_Q1AW01 Type IV pilus assembly protein PilM n=1 Tax=Rubr... 61 5e-08 UniRef50_A6GHB3 Type IV pilus biogenesis protein PilM n=1 Tax=Pl... 60 6e-08 UniRef50_Q0AZI1 Tfp pilus assembly protein ATPase PilM-like prot... 60 7e-08 UniRef50_A5WAB6 Tfp pilus assembly protein ATPase PilM-like prot... 60 7e-08 UniRef50_A6T3G1 PilM type IV pilus assembly protein n=24 Tax=cel... 58 3e-07 UniRef50_Q0EXA2 Type IV pilus biogenesis protein PilM n=1 Tax=Ma... 57 4e-07 UniRef50_B8D2D5 Tfp pilus assembly protein, ATPase PilM n=1 Tax=... 57 7e-07 UniRef50_C6CY61 Fimbrial assembly family protein n=1 Tax=Paeniba... 57 7e-07 UniRef50_C0GE60 Type IV pilus assembly protein PilM n=1 Tax=Deth... 57 7e-07 UniRef50_Q3JEG9 Type IV pilus assembly protein PilM n=57 Tax=Gam... 57 8e-07 UniRef50_Q60BY8 Type 4 fimbrial biogenesis protein PilM n=10 Tax... 57 9e-07 UniRef50_B3E9T0 Type IV pilus assembly protein PilM n=8 Tax=Delt... 56 1e-06 UniRef50_A5D357 Tfp pilus assembly protein, ATPase PilM n=1 Tax=... 55 2e-06 UniRef50_B7GH54 Tfp pilus assembly protein, ATPase PilM n=8 Tax=... 55 2e-06 UniRef50_Q1NMN0 Type IV pilus assembly protein PilM n=2 Tax=Delt... 55 3e-06 UniRef50_B7J635 Type IV pilus assembly protein PilM n=2 Tax=Acid... 54 4e-06 UniRef50_D0Z1J0 Type IV pilus biogenesis protein PilM n=5 Tax=Ph... 54 4e-06 UniRef50_Q5E2F4 Pili assembly protein PilM n=4 Tax=Gammaproteoba... 54 5e-06 UniRef50_A6D0C0 Fimbrial assembly protein PilM, putative n=1 Tax... 54 7e-06 UniRef50_C0DV42 Putative uncharacterized protein n=1 Tax=Eikenel... 53 8e-06 UniRef50_B9ZRR4 Type IV pilus assembly protein PilM n=1 Tax=Thio... 53 1e-05 UniRef50_Q7NHV1 Glr2434 protein n=1 Tax=Gloeobacter violaceus Re... 53 1e-05 UniRef50_Q1QZY8 Type IV pilus assembly protein PilM n=1 Tax=Chro... 52 2e-05 UniRef50_Q72IW8 Pilus-associated protein pilM n=6 Tax=cellular o... 52 2e-05 UniRef50_B1I3G2 Type IV pilus assembly protein PilM n=1 Tax=Cand... 51 4e-05 UniRef50_A1SFR2 Type IV pilus assembly protein PilM n=1 Tax=Noca... 51 4e-05 UniRef50_C6IYF3 Predicted protein n=1 Tax=Paenibacillus sp. oral... 49 1e-04 UniRef50_A4J3B9 Type IV pilus assembly protein PilM n=1 Tax=Desu... 49 1e-04 UniRef50_B5WSN7 Putative uncharacterized protein n=10 Tax=Burkho... 49 1e-04 UniRef50_Q1IXL4 Type IV pilus assembly protein PilM n=5 Tax=Dein... 49 2e-04 UniRef50_A0LFN4 Type IV pilus assembly protein PilM n=1 Tax=Synt... 49 2e-04 UniRef50_Q1Q8Q3 Type IV pilus assembly protein PilM n=3 Tax=Mora... 48 2e-04 UniRef50_A5GWJ6 Putative uncharacterized protein SynRCC307_2352 ... 48 3e-04 UniRef50_B6J4A0 Putative uncharacterized protein n=6 Tax=Coxiell... 48 4e-04 UniRef50_A0KN34 Type IV pilus biogenesis protein PilM n=3 Tax=Ae... 47 4e-04 UniRef50_Q1D0B0 Type IV pilus biogenesis protein PilM n=7 Tax=My... 47 5e-04 UniRef50_Q6AS38 Related to fimbrial assembly protein PilM n=1 Ta... 47 5e-04 UniRef50_B2I0J8 Tfp pilus assembly protein, ATPase PilM n=10 Tax... 47 5e-04 UniRef50_UPI0001C16347 Type IV pilus assembly protein PilM n=2 T... 47 7e-04 UniRef50_B0JRP3 Type IV pilus assembly protein n=26 Tax=Cyanobac... 46 0.001 UniRef50_C9R931 Type IV pilus assembly protein PilM n=1 Tax=Ammo... 46 0.002 UniRef50_A5KSX7 Type IV pilus assembly protein PilM n=3 Tax=cand... 45 0.002 UniRef50_A8VZF1 Cyclic nucleotide-binding n=1 Tax=Bacillus selen... 45 0.002 UniRef50_D0L236 Type IV pilus assembly protein PilM n=1 Tax=Halo... 44 0.004 UniRef50_Q4KJJ4 Type IV pilus biogenesis protein PilM n=1 Tax=Ps... 44 0.005 UniRef50_B8FQ80 Fimbrial assembly family protein n=2 Tax=Desulfi... 44 0.005 UniRef50_Q2B6I7 Putative uncharacterized protein n=1 Tax=Bacillu... 44 0.007 UniRef50_Q061N4 Putative uncharacterized protein n=1 Tax=Synecho... 43 0.008 UniRef50_P31768 Competence protein A n=18 Tax=Haemophilus influe... 43 0.010 UniRef50_C1ZJR3 Tfp pilus assembly protein, ATPase PilM n=1 Tax=... 43 0.012 UniRef50_C8WRG1 Tfp pilus assembly protein ATPase PilM-like prot... 43 0.013 UniRef50_Q2BLX5 Type IV pilus assembly protein PilM n=1 Tax=Nept... 42 0.014 UniRef50_Q3A898 Putative uncharacterized protein n=1 Tax=Pelobac... 42 0.016 UniRef50_A6FZH9 Fimbrial assembly protein n=1 Tax=Plesiocystis p... 42 0.017 UniRef50_B3E8R7 Tfp pilus assembly protein ATPase PilM-like prot... 41 0.040 UniRef50_D0I3T9 Type IV pilus biogenesis protein PilM n=1 Tax=Gr... 41 0.040 UniRef50_A6VM68 Competence protein A n=1 Tax=Actinobacillus succ... 40 0.088 >UniRef50_P45753 Uncharacterized protein yrfD n=83 Tax=Enterobacteriaceae RepID=YRFD_ECOLI Length = 259 Score = 309 bits (792), Expect = 5e-83, Method: Composition-based stats. Identities = 259/259 (100%), Positives = 259/259 (100%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL Sbjct: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 Query: 61 PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD 120 PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD Sbjct: 61 PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD 120 Query: 121 YSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLAW 180 YSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLAW Sbjct: 121 YSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLAW 180 Query: 181 RDNEQWLWATRYSWGRKLAVGMTSAKELAAALSVDPESVAICGEGGFDPWEAVSVRQPPL 240 RDNEQWLWATRYSWGRKLAVGMTSAKELAAALSVDPESVAICGEGGFDPWEAVSVRQPPL Sbjct: 181 RDNEQWLWATRYSWGRKLAVGMTSAKELAAALSVDPESVAICGEGGFDPWEAVSVRQPPL 240 Query: 241 PPPGGDFAIALGLALGKAY 259 PPPGGDFAIALGLALGKAY Sbjct: 241 PPPGGDFAIALGLALGKAY 259 >UniRef50_A4WFI3 Putative uncharacterized protein n=2 Tax=Enterobacter RepID=A4WFI3_ENT38 Length = 260 Score = 285 bits (730), Expect = 9e-76, Method: Composition-based stats. Identities = 123/256 (48%), Positives = 173/256 (67%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 MAFK W+ G+H+QQ +AV + + L+RWW++PL II+DG+I++ +QL L Sbjct: 1 MAFKTWRTGVHIQQDRVLAVCLTKERTGWNLRRWWQIPLHPGIIRDGQIIEPEQLVAALR 60 Query: 61 PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD 120 WS+ LPQ H I LAFPA+RTLQ++ P P+++L E EQ +W++ M+REL+M PD+L FD Sbjct: 61 AWSKVLPQHHRIFLAFPAARTLQKALPCPALNLRESEQASWIASAMSRELEMAPDALCFD 120 Query: 121 YSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLAW 180 Y +D+L+ +++VTAAQ+KE+A LLTLA+ LR+HV+AITPDA AL L L C W Sbjct: 121 YVQDTLTRSFHVTAAQNKEVAALLTLAKTLRLHVAAITPDAGALVNLLLLLAPPAHCAVW 180 Query: 181 RDNEQWLWATRYSWGRKLAVGMTSAKELAAALSVDPESVAICGEGGFDPWEAVSVRQPPL 240 RD+ WLWATR+ WGRK + +L+A L++ PE +A+ DP+ VS P L Sbjct: 181 RDDHHWLWATRHQWGRKPLTEAGTVADLSAILALKPEDMALFAADNLDPFTLVSRNLPSL 240 Query: 241 PPPGGDFAIALGLALG 256 P G DF +AL LA+G Sbjct: 241 PDSGADFTVALALAMG 256 >UniRef50_B5XTU1 HofM protein n=5 Tax=Klebsiella RepID=B5XTU1_KLEP3 Length = 266 Score = 272 bits (696), Expect = 7e-72, Method: Composition-based stats. Identities = 113/261 (43%), Positives = 151/261 (57%), Gaps = 2/261 (0%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 MAF+ W+IG+H+QQ VA++ L+RWWR+PL +++ G +VD L L Sbjct: 1 MAFRNWRIGMHIQQDSIAIVALLHERSHWALRRWWRIPLPPGLVRQGMVVDVSALGAQLS 60 Query: 61 PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD 120 W RELP +H + +AFPA RTLQ+ P P +L +REQ W++ M ++L M SL D Sbjct: 61 AWRRELPVQHQVSIAFPAVRTLQKRLPYPQFALRDREQATWIASAMTQQLAMPAASLSID 120 Query: 121 YSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLAW 180 Y+ S + VTAAQ ++ L LA RLR+ V+AI PDASAL F+P L Q LAW Sbjct: 121 YAPTSRDDGWQVTAAQRLDINVLRALAGRLRLRVAAIVPDASALGAFVPLLNPQSQGLAW 180 Query: 181 RDNEQWLWATRYSWGRKLAVGMTSAKELAAALSVDPESVAICGEG--GFDPWEAVSVRQP 238 RD WLWAT+ +WG + S +LA L V A G+ D W+ + RQP Sbjct: 181 RDENHWLWATQEAWGCVTCDEVKSLSQLAEQLQVPLRLCADAGDEARNLDVWQVIHRRQP 240 Query: 239 PLPPPGGDFAIALGLALGKAY 259 PLP G +AIALGLALG + Sbjct: 241 PLPVDGDRYAIALGLALGSEH 261 >UniRef50_C9Y279 Uncharacterized protein yrfD n=2 Tax=Cronobacter RepID=C9Y279_CROTZ Length = 260 Score = 256 bits (654), Expect = 5e-67, Method: Composition-based stats. Identities = 108/265 (40%), Positives = 141/265 (53%), Gaps = 12/265 (4%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 M WQIGLH+Q ++VA+ QRWW LPL + Q L + L Sbjct: 1 MIGAQWQIGLHIQPDIVISVALTPKRGGWRQQRWWALPLAPYHDDE---QRRQALIEALT 57 Query: 61 PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD 120 PW +LP+ I L FPA RTLQR PRP +L E E AWL AR+L + PD+L FD Sbjct: 58 PWRAQLPRYSSIRLGFPAQRTLQRELPRPVTALCEPECEAWLGAVAARQLSLPPDALAFD 117 Query: 121 YSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLAW 180 Y+E Y VTAA++ E+A L A LR +A+TPDASAL F P++ + + + Sbjct: 118 YTES--QEGYAVTAARAVEVAELTACARALRFTPAALTPDASALACFFPYVDNTCKVIVA 175 Query: 181 RDNEQWLWATRYSWGRKLAVGMTSAKELAAALSVDPESVAICGE-------GGFDPWEAV 233 + QWLWATR WG G L L+V + + +CG FDPW+A+ Sbjct: 176 QAGAQWLWATRDRWGVCATPGAEGLLSLGVQLNVPAQEITLCGAIREEGDWQRFDPWQAI 235 Query: 234 SVRQPPLPPPGGDFAIALGLALGKA 258 + PPLP G FA+A+GLALG A Sbjct: 236 TWPCPPLPDERGRFAVAIGLALGAA 260 >UniRef50_Q7NA51 Similar to unknown protein YrfD of Escherichia coli n=2 Tax=Photorhabdus RepID=Q7NA51_PHOLL Length = 276 Score = 256 bits (653), Expect = 7e-67, Method: Composition-based stats. Identities = 67/274 (24%), Positives = 115/274 (41%), Gaps = 22/274 (8%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 M W +GL +Q AVA ++ L+ W+ L + ++ +GR+ + L L Sbjct: 1 MYSPKWYVGLDIQNGILRAVAAIKRRDGWQLRHCWQYLLSDAVMPEGRLQRPEILCDILN 60 Query: 61 PWSRELPQRHHIMLAFPASRTLQRSFPR-PSMSLGEREQTAWLSGTMARELDMDPDSLRF 119 W +ELP++ LA P +TLQ+S P ++L E EQ +++ + ++ + L Sbjct: 61 QWRQELPKKISFRLALPVQQTLQKSLILPPDINLKEPEQGWFINASAEKQFPFNTRELAL 120 Query: 120 DYSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPF--LPSHQQC 177 DY + ++AA+ K+L L + + AI AL+ + +P+ Sbjct: 121 DYRIIEQNA--YISAARQKDLNLWLQCLAQAGIFPDAIDIAPCALRYIAQYAGVPADSWL 178 Query: 178 LAWRDNEQWLWAT----RYSWGRKLAVGMTSAKELAAALSVDP------------ESVAI 221 L R WLW + +++ A S +++ LS + Sbjct: 179 LH-RQQSGWLWVSPANAPFAYDLVSANTAVSPQQIIRQLSASSMAEQPVYYSSYQQEALP 237 Query: 222 CGEGGFDPWEAVSVRQPPLPPPGGDFAIALGLAL 255 G +D A QPPLP ++ IA GLAL Sbjct: 238 EGTYSWDMLTAFRHYQPPLPIQLMEYVIAGGLAL 271 >UniRef50_C6C803 Putative uncharacterized protein n=5 Tax=Enterobacteriaceae RepID=C6C803_DICDC Length = 283 Score = 255 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 85/280 (30%), Positives = 125/280 (44%), Gaps = 27/280 (9%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 MA+ +WQIG+ +Q A+A+ R L++WW+LPL D ++ G + + L L Sbjct: 1 MAYPVWQIGMDVQNGVLRALAVQRRRHGWQLRQWWQLPLPGDTLRGGSLHNPAALCAVLQ 60 Query: 61 PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD 120 W RELP + LAFPA R LQ+ P L E E+ ++ A++L + D+L FD Sbjct: 61 RWKRELPHYVSLRLAFPADRVLQQRLSEPDGRLREPERGWYIEKMAAKKLPVSSDALIFD 120 Query: 121 YSEDS-LSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLP-SHQQCL 178 Y D ++ + VTAA+ ELA L + + A+ AL+ + L Sbjct: 121 YRIDPAVADSVLVTAARKAELALWLDCFRHAGLQLDAVDITPCALRCMAHQAGLASDNML 180 Query: 179 AWRDNEQWLWATRYSWGRKLAVGMTS---AKELAAALS-VDPESVAICGEGG-------- 226 R ++WLW + S LA G A + +A LS V + E Sbjct: 181 VHRFEDRWLWIS--SLNAPLAFGTVHVDDAADFSALLSYVSAHYEPMASEPIYLSTSAPD 238 Query: 227 -----------FDPWEAVSVRQPPLPPPGGDFAIALGLAL 255 + P A S +QPPLP F IA GLA+ Sbjct: 239 FLPEASSSFTLWSPLPAFSQQQPPLPAFPSAFVIAGGLAI 278 >UniRef50_B2Q5V1 Putative uncharacterized protein n=4 Tax=Providencia RepID=B2Q5V1_PROST Length = 286 Score = 250 bits (637), Expect = 5e-65, Method: Composition-based stats. Identities = 64/273 (23%), Positives = 108/273 (39%), Gaps = 21/273 (7%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 M + W IG+ L Q VA + K +L W+ + N+I + L K L+ Sbjct: 7 MYSQKWNIGIDLCQASIQLVATKQNRKRRYLCECWQHNIPNEITSQSEHDRYEMLLKILI 66 Query: 61 PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMAREL-DMDPDSLRF 119 W R+LP+ + +AF A RTL++ P ++ + W + A +L + + L Sbjct: 67 QWRRKLPKNCQVSMAFSALRTLKQQVTLPEQVTLKQPELGWYLQSCAEKLFPLSSEDLVI 126 Query: 120 DYSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPF--LPSHQQC 177 DY + AY + + E+ L ++AI L+ + LP Sbjct: 127 DYRVID-NRAY-LNGVRKSEIVFWQNLLHDSGFLLTAIDVAPCVLRYIARYAGLPDESWL 184 Query: 178 LAWRDNEQWLWATRYS----WGRKLAVGMTSAKELAAALSVD--PESVAICGEGGFDP-- 229 + +R E WLW S + + +T+ ++ A L+ + P + + G Sbjct: 185 IHYRQGE-WLWTGPVSQPATYNQIQENDITTLPQIIALLNENNGPLKLPLYYIGDHHKSQ 243 Query: 230 -------WEAVSVRQPPLPPPGGDFAIALGLAL 255 +A LP GDF +A GLAL Sbjct: 244 AVHSWSLLQAFHNHTVRLPHQLGDFVVATGLAL 276 >UniRef50_C6CH35 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=C6CH35_DICZE Length = 292 Score = 245 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 67/246 (27%), Positives = 107/246 (43%), Gaps = 10/246 (4%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 MA+ IWQ+GL +Q A+A+ R L+ WW+LPL + ++ G + +L L Sbjct: 1 MAYPIWQVGLDIQNGFIRAMAVQRRRYGWQLRHWWQLPLPDGTLRGGSLHHPTELCTVLR 60 Query: 61 PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD 120 W +ELP+ + L FPA R LQ+ P L E ++ ++ + L + D L D Sbjct: 61 QWRQELPRFVSLRLGFPAPRVLQQRLAMPDRRLREPQRGDYIRKMAVKALPVSGDDLALD 120 Query: 121 YSEDSLSPAY-NVTAAQSKELATLLTLAERLRVHVSAITPDASALQRF-LPFLPSHQQCL 178 Y D +P VTAA+ EL L + A+ AL+ + + L Sbjct: 121 YRPDPQTPNMLLVTAARQTELDVWLHCLRDAGLQPDAVDITPCALRCMAARAGLADDRLL 180 Query: 179 AWRDNEQWLWATRYSWGRKLAVGMTSAKELAAA---LSVDPE---SVAICGEGGFDPWEA 232 R ++ WLW + LA G ++A + V+P+ V+ C + P Sbjct: 181 LHRFDDHWLWVSPLK--APLAFGTFHPDDMADGATDIQVEPDLIKYVSTCYQKEVPPVAY 238 Query: 233 VSVRQP 238 +S P Sbjct: 239 LSASTP 244 >UniRef50_D0FX05 Conserved uncharacterized protein n=4 Tax=Enterobacteriaceae RepID=D0FX05_ERWPY Length = 275 Score = 236 bits (601), Expect = 7e-61, Method: Composition-based stats. Identities = 73/274 (26%), Positives = 119/274 (43%), Gaps = 23/274 (8%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 MAF+ WQ+GL +Q + A+ I R L+ WW+ L D +++G + L L Sbjct: 1 MAFETWQVGLDIQNGQLCALGIQRRRNGWQLRHWWQHALPQDTLRNGLVQRPDALVPLLK 60 Query: 61 PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD 120 W ++LP R + + FP +QR RP+ +L E +++ ++ R M P+ L D Sbjct: 61 LWRKQLPSRISLRVGFPPQLVMQRQLARPTAALREPDRSHYIIAAARRFFPMAPEELALD 120 Query: 121 YS-EDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLP-SHQQCL 178 Y + + +TAA+ + L + L +++ + + +AL L L Sbjct: 121 YRTGGDANGSLYLTAARQEALQSWLGCLQQVSLTPDVLELTPAALFALARSLGVDASAAL 180 Query: 179 AWRDNEQWLWATR----YSWG-------------RKLAVGMTSAKELAAALSVDPESVAI 221 R ++ WLW WG R+ +G +S ++AL+ Sbjct: 181 VHRLSDHWLWYAPQQHDRPWGWCPYAEAEDFHQLRQRFLGNSSTIWYSSALT----EALP 236 Query: 222 CGEGGFDPWEAVSVRQPPLPPPGGDFAIALGLAL 255 G P A+ QPPLP G FA+A GLAL Sbjct: 237 AGASALSPLAALRCYQPPLPAYDGAFALATGLAL 270 >UniRef50_Q1CCN3 Type IV pilus biogenesis protein PilM n=35 Tax=Enterobacteriaceae RepID=Q1CCN3_YERPN Length = 298 Score = 228 bits (581), Expect = 1e-58, Method: Composition-based stats. Identities = 64/289 (22%), Positives = 116/289 (40%), Gaps = 32/289 (11%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 M + WQ+GL +Q + A+A++R L+ WW L + ++++G + L++ L Sbjct: 1 MYSQYWQVGLDIQMEAIRALAVIRRRNGWQLRYWWHKILPSGVLREGILHQPDILSEQLK 60 Query: 61 PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD 120 ++LP+ + +A PA R LQ + P L E E+ ++ + +R ++ +L D Sbjct: 61 LLRKQLPRHISLRIALPAQRILQHTIHVPDRRLREPERDGFIKASASRLFPVNSQALALD 120 Query: 121 YSEDSLSPA-YNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPF--LPSHQQC 177 Y ++++ + +TAA+ E+ E+ + I AL+ L Sbjct: 121 YCRETVASSELLITAARQSEVQQWQACLEQAGLSSQVIDIAPCALRYMATATGLSGPYW- 179 Query: 178 LAWRDNEQWLWAT----RYSWG--------RKLAVGMTSAKELAAALSVDP--------- 216 L R +WLW + + G R + L A L++ Sbjct: 180 LVHRLANEWLWVSSSDMPFHSGVVAIETECRTQENDIRLLSALLAQLNMRGAGEDGAPLP 239 Query: 217 -------ESVAICGEGGFDPWEAVSVRQPPLPPPGGDFAIALGLALGKA 258 + + P A + QPPLP F +A GLA+ A Sbjct: 240 VYYSSVVKESLPENTRSWSPLTAFAHYQPPLPALPAAFTLAGGLAVRAA 288 >UniRef50_C5BGR0 Putative uncharacterized protein n=2 Tax=Edwardsiella RepID=C5BGR0_EDWI9 Length = 276 Score = 209 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 71/272 (26%), Positives = 108/272 (39%), Gaps = 22/272 (8%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 M W++G+ +Q + VAVA+ L+ WWRLPL D +DG + L TL Sbjct: 1 MGGGHWRLGIDIQPAQLVAVALSARRDGIQLRGWWRLPLTADPDRDGL---SPSLPATLT 57 Query: 61 PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD 120 LP+R + AFPA R ++ P ++ L ++ L R+L + L D Sbjct: 58 TLRARLPRRLSVRAAFPAERAIRDMLPGSTLPLTPWQRHRLLLAQGERQLMLPAHQLACD 117 Query: 121 YSEDSLSPA-YNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFL-PSHQQCL 178 ++ + V A + L + + + +T AL+R S L Sbjct: 118 FAPAPEGGGRWQVCAVHRAQRDRWCALFDSAGLPLQRLTLAPCALRRLARLAGESPAAPL 177 Query: 179 AWRDNEQWLWATRYSWGRKLAVGMTSAKE-----LAAALSVDPESVA------ICGEG-- 225 + D ++ W WG L G S + A A++ P VA CG Sbjct: 178 IYGDGYRFCWIAP--WGSPLQYGFVSLSDGPEAACAQAVAALPPGVADGVAPLHCGSDSG 235 Query: 226 --GFDPWEAVSVRQPPLPPPGGDFAIALGLAL 255 G+ AV PLP F +ALGLA+ Sbjct: 236 HRGWSGLRAVRHLVSPLPADPAAFCLALGLAV 267 >UniRef50_D2U382 Putative uncharacterized protein n=1 Tax=Arsenophonus nasoniae RepID=D2U382_9ENTR Length = 291 Score = 152 bits (383), Expect = 1e-35, Method: Composition-based stats. Identities = 54/275 (19%), Positives = 93/275 (33%), Gaps = 23/275 (8%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIV--DAQQLAKT 58 M + WQIGL + + VA + L+ W+ L +D L Sbjct: 15 MFLQKWQIGLDIHHNKIQLVAATQHRHGWQLRECWQHSLPITKTQDTETQNIRITTLKNI 74 Query: 59 LLPWSRELPQRHHIMLAFPASRTLQRSFPRPS-MSLGEREQTAWLSGTMARELDMDPDSL 117 L W ++LP + + L+ F P ++L E E + MD L Sbjct: 75 LQQWHKKLPNNCDARFSLSTLQILKSHFLLPEKITLTEPELGWLVHSKAETLFPMDIREL 134 Query: 118 RFDYSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFL--PFLPSHQ 175 DY + A + ++ L + +S I +AL+ +P + Sbjct: 135 ILDYRI--YQKQIYLCATRRSDIVFWSELLHEVGFSLSVIDISPNALRYLAHKASIPDNT 192 Query: 176 QCLAWRDNEQWLWATRY----SWGRKLAVGMTSAKELAAALSVDPESVA--ICGEGG--- 226 L +R ++W+ A + + S ++L L + + I G Sbjct: 193 W-LIYRRQQEWICAGPLYQSIHYQPLEITEVDSIEKLVLLLPKETQQQPNTIYYLGNDIK 251 Query: 227 ------FDPWEAVSVRQPPLPPPGGDFAIALGLAL 255 + ++ LP +FAIA GLAL Sbjct: 252 HHHFSTWSLLDSFQYYSIKLPKDFHNFAIAAGLAL 286 >UniRef50_B4F032 Putative uncharacterized protein n=4 Tax=Proteus RepID=B4F032_PROMH Length = 274 Score = 74.0 bits (180), Expect = 4e-12, Method: Composition-based stats. Identities = 43/194 (22%), Positives = 79/194 (40%), Gaps = 15/194 (7%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLE-NDIIKDGRIVDAQQLAKTL 59 M +QIG+ + AV + + K+ + +W+ PL ND I D L L Sbjct: 1 MKTDNYQIGIEININHINAVLVFQQNKQWKINAFWQFPLPLNDNIDD------INLRTIL 54 Query: 60 LPWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGERE---QTAWLSGTMARELDMDPDS 116 W + LP + + LA P + + ++ + A L T ++ + + Sbjct: 55 KRWQQSLPPINRVALALPDTVASYHTIALSNLISLTPAAYYRLAQLRATSHQQ--VTKQA 112 Query: 117 LRFDYSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLP-SHQ 175 ++FDY + + A ++ + T + L ++ + ++AI A AL+ L S Sbjct: 113 VQFDYRQHNQHLAIHLH--NKTLIETYIALFAKINLTITAIDIPACALRYVATHLNISPH 170 Query: 176 QCLAWRDNEQWLWA 189 L + N Q LW Sbjct: 171 SILIFCQNNQMLWV 184 >UniRef50_C9NLF2 Type IV pilus biogenesis protein PilM n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NLF2_9VIBR Length = 305 Score = 70.1 bits (170), Expect = 7e-11, Method: Composition-based stats. Identities = 37/206 (17%), Positives = 73/206 (35%), Gaps = 11/206 (5%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELP 67 G+ + Q AV + L + ++P+E DI D ++ Q++ K L + LP Sbjct: 7 TGIDISHQSIKAVVLKPEKDTFALVGYHQMPVEADIFTDNYRLNYQKIVKKLKELRKALP 66 Query: 68 QRHH-IMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL 126 + L+ P S + + +L + E ++ AR+ +D ++L D++ S Sbjct: 67 LFSRKVCLSVPDSSVISKQLQI-DSNLSDAECQFAITQAFARQSSVDVEALYLDFTSLSH 125 Query: 127 SPA--YNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLAWRDNE 184 A Y V A + + + + + + I P + L + Sbjct: 126 DKAQDYQVYAVRKGCVDSRVAPCLKAGMEPVLINPYSHNLAQLWRRAAKQY------QQS 179 Query: 185 QWLWATRYSWGRKLAVGMTSAKELAA 210 WL ++W L Sbjct: 180 NWLLI-DFNWHSIALYCEAEPLRLID 204 >UniRef50_Q31KD6 Type IV pilus assembly protein PilM n=2 Tax=Synechococcus elongatus RepID=Q31KD6_SYNE7 Length = 359 Score = 66.7 bits (161), Expect = 7e-10, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 61/172 (35%), Gaps = 9/172 (5%) Query: 7 QIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL-PWSRE 65 ++G+ + + I R LQ + + L + + +DGR++D+ L+ L + Sbjct: 15 RLGVEITPERINLAHIGRKGNRLQLQDFVSVELPDGLFQDGRVLDSFSLSDLLRTAINDN 74 Query: 66 LPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDY---- 121 + + A P + R P P+ + ++ A L + DY Sbjct: 75 RIRTKRVSTAVPGREVITRLLPMPAELDDAELRETLINQEAALFLPFPREEADIDYLKLD 134 Query: 122 ----SEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLP 169 +++ + A + + L L + + + + AL R + Sbjct: 135 YFLDADEVEKLHVLLVATRRQVTDVYLDLFAQAGLTPDIVEVGSFALIRTIR 186 >UniRef50_Q7NZT8 Type 4 fimbrial biogenesis protein PilM n=2 Tax=Chromobacterium group RepID=Q7NZT8_CHRVO Length = 370 Score = 66.3 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 65/164 (39%), Gaps = 9/164 (5%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLP-WSREL 66 +GL + V + R + ++R+ PL D + DG +VD + +A+ L W R Sbjct: 27 LGLDISSTAIKLVELSRNGRNIQVERYVIEPLPKDAVNDGNLVDIEGIAEALRRGWKRLG 86 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL 126 + +A P + + P+ + ++ + + + D + D+ Sbjct: 87 SPIRSVAIAIPTPMAIYKKLLVPASQTEDMDE--LIESEANQIIPFPLDEVNLDHQVLGP 144 Query: 127 SPA------YNVTAAQSKELATLLTLAERLRVHVSAITPDASAL 164 SP+ + AA+ +++ + + E + + ++ A+ Sbjct: 145 SPSSMDDLEVLLCAARKEKVEERVAVVEMAGLRAHVVDVESFAM 188 >UniRef50_A9GGQ6 Tfp pilus assembly protein, ATPase PilM n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GGQ6_SORC5 Length = 353 Score = 64.7 bits (156), Expect = 3e-09, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 63/177 (35%), Gaps = 10/177 (5%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTL- 59 M+ IG+ + I G + L R PL I DG +++AQ + + L Sbjct: 1 MSEGKNLIGVDIGSSAIKIAQIKEGRRGYGLVRLGYAPLAPQAIVDGHVMNAQAIVEALG 60 Query: 60 LPWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGE-REQTAWLSGTMARELDMDPDSLR 118 +S ++ I L+ + R P M+ E EQ W + + D + Sbjct: 61 RAFSEAKIRQREIALSISGQAVIIRKITVPLMTAAELDEQIQW---EAEQHIPFDIKDVH 117 Query: 119 FDY-----SEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPF 170 DY ++ + AA+ E+ +A ++ + DA +Q Sbjct: 118 VDYEVLRRRPEAGQMDLLLVAAKRDEINDYTQIARTAKLKPMVVDIDAFTVQNLFEV 174 >UniRef50_A6FBL4 Type IV pilus biogenesis protein PilM n=1 Tax=Moritella sp. PE36 RepID=A6FBL4_9GAMM Length = 355 Score = 63.6 bits (153), Expect = 6e-09, Method: Composition-based stats. Identities = 21/166 (12%), Positives = 53/166 (31%), Gaps = 8/166 (4%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELP 67 IG+ A+A+ + ++ + + + D ++ D + L L ++ P Sbjct: 14 IGVDFGSSSVKALALSKRSEHYVVDMVSEVSTPKGCVVDHQLQDIEALTNVLQQVRQDFP 73 Query: 68 -QRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL 126 + A + + + L E + + D + D+ + Sbjct: 74 FRYKQAATAVSGTNVITK-IIYVDTDLSGPELEMHIELEAESLIPFPLDEISLDFEILGI 132 Query: 127 SP------AYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQR 166 + ++A +++ + +L E + A AL R Sbjct: 133 NDNNPGKHNVLLSATRTESVTSLAGCLEENDFIPQIVDVAAHALAR 178 >UniRef50_Q1IRM9 Type IV pilus assembly protein PilM n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IRM9_ACIBL Length = 350 Score = 63.2 bits (152), Expect = 8e-09, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 60/168 (35%), Gaps = 7/168 (4%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELP 67 +GL + AV + + + PL +DI+ D IVD+ +A + E Sbjct: 11 VGLDIGSSSIKAVELKKSRNGVEVAHMAMEPLSSDIVVDSMIVDSGSVASAITKIFTESG 70 Query: 68 QRHH-IMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL 126 + + + + + P +MS + E + + A+ + D + DY S Sbjct: 71 IKTRAVATSVSGHSVIVKRIPMSTMS--DSELSGIIQTEAAQHIPFDISDVSIDYQILSD 128 Query: 127 SPA----YNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPF 170 + + A + ++ + + + DA ALQ + Sbjct: 129 TGGSTMDVLLVAVKKDKILNYTNVLSLAGKSPAVVDIDAFALQNCYEY 176 >UniRef50_A1SRB1 Type IV pilus assembly protein PilM n=2 Tax=Psychromonas RepID=A1SRB1_PSYIN Length = 354 Score = 62.8 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 23/171 (13%), Positives = 61/171 (35%), Gaps = 8/171 (4%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELP 67 IG+ A+A+ + + + +E +I D R + +L + + ++ P Sbjct: 14 IGIDFGSSAIKAIALSKRKGTFQIDAVAEIAVEKGVIVDHRFENIAKLTEIIKQLCKKFP 73 Query: 68 -QRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL 126 ++ +A + + + P + +L ++ + + D + D+ + Sbjct: 74 ASYQNVAIAVSGADVITKVIPM-NTNLNDQSLEYQVEIEAENSIPFPLDEIFLDFEIIRI 132 Query: 127 SPA------YNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFL 171 + V+AA+ + + + E + V + + L R L Sbjct: 133 NANNPDLKDVLVSAARKDTVLSQVHCIEEAGLQVKIVDIASHTLARACNLL 183 >UniRef50_D0M6E3 Type IV pilus biogenesis protein PilM n=20 Tax=Vibrionales RepID=D0M6E3_VIBSE Length = 338 Score = 62.0 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 23/175 (13%), Positives = 59/175 (33%), Gaps = 12/175 (6%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELP 67 G+ + AV + L + + L+ I+ + ++ Q++ KTL +ELP Sbjct: 7 TGIDIGHNSLKAVVLKPTGNNYALLGYKEILLKEGIVAENNTINHQEIVKTLKLIKKELP 66 Query: 68 ---QRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSED 124 ++ I + P + + + +L + E + + + + L D+ Sbjct: 67 FGAKKVAISV--PDNSVISKKLQI-EQNLEDSEVEFAVIQAFSHQSPFPVEELSLDFVRL 123 Query: 125 SLSPA------YNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPS 173 Y V A + + + + ++ + + + +L Sbjct: 124 RAEDGLRGTDNYQVFATRKDVVDSRVDALQKSGLKPVLVDVHSQSLGHIWKLTAD 178 >UniRef50_Q1IGB2 Putative type IV pili biogenesis protein PilM n=1 Tax=Pseudomonas entomophila L48 RepID=Q1IGB2_PSEE4 Length = 291 Score = 60.9 bits (146), Expect = 4e-08, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 62/184 (33%), Gaps = 14/184 (7%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELP 67 +G+ + + + R + W P+ G + L + P Sbjct: 13 LGVEIASDTIRMLQLRRQRGHWRVAAWACEPI---TRPMGHSQLPEALREAHR--RCGTP 67 Query: 68 QRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSLS 127 QR + LA P+S+ + + P+ + + L + D L D+ +S Sbjct: 68 QR-RVALALPSSQVICKVCQLPAETARFDAEVR-LLAQAEQLFPFPLDDLALDFQVLGVS 125 Query: 128 PA------YNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPF-LPSHQQCLAW 180 V A + +L L + + + V+A+ D+ AL R + P+ L Sbjct: 126 AGSPAHIDVLVAACRQSQLDPLEHMFNQAGMQVAAMEVDSFALLRAMGVEAPADLALLQL 185 Query: 181 RDNE 184 E Sbjct: 186 EAGE 189 >UniRef50_B7VLK2 Tfp pilus assembly protein, ATPase PilM n=32 Tax=Vibrio RepID=B7VLK2_VIBSL Length = 349 Score = 60.9 bits (146), Expect = 4e-08, Method: Composition-based stats. Identities = 26/172 (15%), Positives = 58/172 (33%), Gaps = 9/172 (5%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELP 67 G+ + AV + + L + LP+ +DI ++ Q+ K L + LP Sbjct: 15 TGIDINHHSIKAVVLKPVGELYALVGYKELPISDDIFTANHTLEYQKTVKKLKELRKGLP 74 Query: 68 QRHH-IMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDS- 125 + ++ P + + + L +RE+ + T A + + L D+ + Sbjct: 75 FGCRNVAISVPDNTVISKVLQI-ESDLEDREKEFSIYQTFAHQSPFPIEELSLDFVKLED 133 Query: 126 ------LSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFL 171 + +Y + A + + + + + I A L Sbjct: 134 KRFGKGSTSSYQIYATRKEVVDSRADALNKAGFKPVVIDTQAHGLLNIWQLA 185 >UniRef50_A0LUH5 Type IV pilus assembly protein PilM n=2 Tax=Actinomycetales RepID=A0LUH5_ACIC1 Length = 354 Score = 60.9 bits (146), Expect = 4e-08, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 56/168 (33%), Gaps = 11/168 (6%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLP-WSREL 66 +GL + V + R+ ++ L ++DG + D +A L WS Sbjct: 7 VGLDIGTSCVRGVEASIARGSVRIDRFGQVALPVGAVRDGEVADVDLVAAALRRLWSEVG 66 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL 126 + + L R + R P M L E ++ L +A L M + D+ Sbjct: 67 FKSRKVALGVSNQRVVVRQVDLPWMELAELRKS--LGYQVADFLPMPVEQAILDFYPVEE 124 Query: 127 --------SPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQR 166 + + A + + + R + +++ AL R Sbjct: 125 YLNEAGARTLRVLIVAGAREMITNAVEAVRRAGLKPASVDLTPFALIR 172 >UniRef50_Q1AW01 Type IV pilus assembly protein PilM n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AW01_RUBXD Length = 379 Score = 60.5 bits (145), Expect = 5e-08, Method: Composition-based stats. Identities = 26/170 (15%), Positives = 54/170 (31%), Gaps = 10/170 (5%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELP 67 IG+ + + AV + L+ L +I G + D + LA L + Sbjct: 16 IGMDIDRSAIKAVQLSGSPGGYVLEHVGYRRLPEGVISGGEVSDPELLAAELRSFRETHA 75 Query: 68 -QRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYS---E 123 + ++L + + R P + E L+ + + + D++ Sbjct: 76 FRGRSVLLGVANEQVVVRFVSFP--RMEPGELAGALAFQAQDYIPVPLEEAVLDHAVLGP 133 Query: 124 DSLSPA---YNVTAAQSKELATLLTLAERLRVHVSAITPDA-SALQRFLP 169 +P + AA+ + + L + A L+ LP Sbjct: 134 SPENPGEDRVLLVAARKEMVRRLTAAVRSGGFRPVGVDVKALCLLRSALP 183 >UniRef50_A6GHB3 Type IV pilus biogenesis protein PilM n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GHB3_9DELT Length = 351 Score = 60.1 bits (144), Expect = 6e-08, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 65/169 (38%), Gaps = 16/169 (9%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELP 67 IGL + V I + + LQ + PL + I +G IVD + ++ +L + + Sbjct: 6 IGLDIGSSSVKLVQIKKSRRGTSLQNFGIEPLPPEAIVEGTIVDQEAVSNAILGLKKRIS 65 Query: 68 -QRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMA----RELDMDPDSLRFDY- 121 + I +A + + R P+M + A L+ M + + D + D+ Sbjct: 66 LKGKDIAMAVSGNSVIIRRLHIPAM------EGAALAEQMEWEVRQNIPFARDEVIVDWE 119 Query: 122 ----SEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQR 166 + AA+ + + +++ + + + DA A+Q Sbjct: 120 VLVERTPDEQMEVCLVAAKKEIVEQYVSVVSAAGFNPAVVDTDAFAMQN 168 >UniRef50_Q0AZI1 Tfp pilus assembly protein ATPase PilM-like protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AZI1_SYNWW Length = 353 Score = 60.1 bits (144), Expect = 7e-08, Method: Composition-based stats. Identities = 35/175 (20%), Positives = 65/175 (37%), Gaps = 10/175 (5%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 M F+ IGL + ++ + + K L + +P N +I+ G+I+ +L K + Sbjct: 24 MLFRATGIGLDIGSKKIKLARVKKVKKGLELMDFASMPTPNGVIEYGKIIAPVELGKAIS 83 Query: 61 PWSRELP-QRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRF 119 +E+ + ++ A +F P M+ E + A + L D F Sbjct: 84 SLVKEMGWKGQKVISALSNQEIFFDNFILPRMNRRESRKAALYQSSS--FLPFPLDEAAF 141 Query: 120 D---YSEDS----LSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRF 167 D E AAQS ++ L + + ++ + A AL R Sbjct: 142 DIFFLREIENGQGRKREVFFAAAQSLQVEHLKKVCTLAGLRLTVVEIPALALNRL 196 >UniRef50_A5WAB6 Tfp pilus assembly protein ATPase PilM-like protein n=4 Tax=Pseudomonas putida RepID=A5WAB6_PSEP1 Length = 293 Score = 60.1 bits (144), Expect = 7e-08, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 59/168 (35%), Gaps = 7/168 (4%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELP 67 +G+ + + + + + + + + + D + +A R Sbjct: 13 VGVEITPDAVRIMQLQQRNRLWRVMGSAQELFQAPLADDWAEAPGEVVAALQRACRRSGL 72 Query: 68 QRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSLS 127 ++ + LA PAS+ + + P G + + L R + L D+ S Sbjct: 73 RQRRVALALPASQVICKLCHLPVEQSGAQLEAQ-LLADAERLFPFPLEDLALDFQVMGAS 131 Query: 128 ------PAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLP 169 V A + LA+L ++ E + + A+ D AL R LP Sbjct: 132 HDQPGCSEVMVAACRQSALASLESVVEEAGLQLEAVEVDTIALCRMLP 179 >UniRef50_A6T3G1 PilM type IV pilus assembly protein n=24 Tax=cellular organisms RepID=A6T3G1_JANMA Length = 360 Score = 57.8 bits (138), Expect = 3e-07, Method: Composition-based stats. Identities = 31/182 (17%), Positives = 64/182 (35%), Gaps = 13/182 (7%) Query: 8 IGLHLQQQEAVAVAIV-RGAKECFLQRWWRLPLENDIIKDGRIVDAQQLA-KTLLPWSRE 65 IGL + V + G E L+ + PL + DG I + Q++ L W + Sbjct: 17 IGLDISSSGVKLVELSEAGKNELRLECFASEPLPRGAVVDGNIENIDQVSDAVLRVWKKS 76 Query: 66 LPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSED- 124 + + P + + + PS L E + ++ + D +R D+ Sbjct: 77 GTRAKFAAMGMPPASVITKKIILPSG-LSEESLELQVETEASQYIPFALDEVRLDFDVIG 135 Query: 125 -----SLSPAYNVTAAQSKELATLLTLAERLRVHVSAITP----DASALQRFLPFLPSHQ 175 + A + +++ + +AE + + + SA+ R +P+ Sbjct: 136 LVENSPDDVEVMLAATRKEKVEDRVAVAEAAGLKPTIMDIESYAARSAIARLTEQMPNRA 195 Query: 176 QC 177 Q Sbjct: 196 QG 197 >UniRef50_Q0EXA2 Type IV pilus biogenesis protein PilM n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EXA2_9PROT Length = 350 Score = 57.4 bits (137), Expect = 4e-07, Method: Composition-based stats. Identities = 30/186 (16%), Positives = 64/186 (34%), Gaps = 12/186 (6%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL-PWSREL 66 +G+ + V + R L +PL D I + I+D+ + + L+ + Sbjct: 2 LGIDISSTGIKLVELARNRSGFELVALAMIPLPRDAIVENTIIDSTAVTQALVDAVEQAR 61 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDY----- 121 P ++ LA + + ++ P E E + + + D D + D+ Sbjct: 62 PASKNVALAVSGNAVIIKTIAVPVA--TEFELEPQIEFEADQHVPYDIDDVFLDFHIQGM 119 Query: 122 -SEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLAW 180 +ED + A + + + + + V + AL+ HQ +A Sbjct: 120 NAEDPEQMDVVLVACKREVVEDYQLVLGNAGLDVKCMDCAVFALENAAETTDEHQPPVA- 178 Query: 181 RDNEQW 186 + W Sbjct: 179 --GDDW 182 >UniRef50_B8D2D5 Tfp pilus assembly protein, ATPase PilM n=1 Tax=Halothermothrix orenii H 168 RepID=B8D2D5_HALOH Length = 352 Score = 57.0 bits (136), Expect = 7e-07, Method: Composition-based stats. Identities = 35/174 (20%), Positives = 63/174 (36%), Gaps = 6/174 (3%) Query: 1 MAFKIWQI-GLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTL 59 M F I + + AV + G + L + G I D +++ L Sbjct: 1 MFFGNKTITAVDIGSYAIKAVKMRAGKNGLNIITAGSRILPEKAVNQGEIQDYAVVSRIL 60 Query: 60 LPWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRF 119 E+ +I+ A P + R+ P +S E E T + L + F Sbjct: 61 KDVLEEINGSKYIITAVPGKNLIIRNMEMPLIS--EEELTEAIKWEADDYLPFPVEQAMF 118 Query: 120 DY---SEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPF 170 DY S+D + + + AA+ K + L+ + + + + + I AL L Sbjct: 119 DYILLSKDEENMSVLLVAAERKTINGLVKIFDNIGLKPAVINAQPMALISLLKI 172 >UniRef50_C6CY61 Fimbrial assembly family protein n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CY61_PAESJ Length = 500 Score = 56.7 bits (135), Expect = 7e-07, Method: Composition-based stats. Identities = 31/173 (17%), Positives = 69/173 (39%), Gaps = 8/173 (4%) Query: 7 QIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPW-SRE 65 ++GL L + + K +++ LP + +I + + + ++L +L W +E Sbjct: 7 RVGLTLDHGGVRYARVRKRKKGWEIEKTGFLPFADGVILEDQFTNMEELRSSLKDWVKKE 66 Query: 66 LPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSE-- 123 I L+ P S+ + R +++ E +Q ++ + L + + +DY Sbjct: 67 RLNGTSITLSIPTSQIIIRKLQIGTVNTKELDQ--LINLEVETALHLPFEDPVYDYIAAG 124 Query: 124 -DSLSPAYNVTAAQSKELATLLTLAERLRVHV--SAITPDASALQRFLPFLPS 173 + S V A+ + L + L E + V + + A A ++ S Sbjct: 125 SEEQSTNVLVYASPQRWLKQCIELLESTGLKVKYAELASTAFARAIQARYIDS 177 >UniRef50_C0GE60 Type IV pilus assembly protein PilM n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GE60_9FIRM Length = 335 Score = 56.7 bits (135), Expect = 7e-07, Method: Composition-based stats. Identities = 27/170 (15%), Positives = 60/170 (35%), Gaps = 10/170 (5%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTL-LPWSREL 66 +GL AV + + ++P+ + + DG + + + +A L WS+ Sbjct: 10 VGLEFDTGLIRAVEVRGKNGSAKVVAGGQVPVPDSAVSDGIVQEPEVVADALQKLWSKAG 69 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSE--- 123 +++L + R P + + EQ L + + D++ Sbjct: 70 IGSKNVVLGMFNQGVIMRLINFPKVPKDKLEQA--LRLQAGEYFPIPLSQMILDFAVVGE 127 Query: 124 ----DSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLP 169 + + AA+ + L ++ +++V + AL R LP Sbjct: 128 VENNGAEQYEVLLVAAKKTHMEPSLEALKKAKLNVDVVDATPLALMRALP 177 >UniRef50_Q3JEG9 Type IV pilus assembly protein PilM n=57 Tax=Gammaproteobacteria RepID=Q3JEG9_NITOC Length = 372 Score = 56.7 bits (135), Expect = 8e-07, Method: Composition-based stats. Identities = 23/174 (13%), Positives = 67/174 (38%), Gaps = 8/174 (4%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTL-LPWSREL 66 +G+ + + + R + ++ + L + + +I + + L +T+ R Sbjct: 31 LGIDISSSAIKLLELSRKGERICVENYAIEALPPHTVVENKIENVEALGETIKRAVKRSG 90 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSE--- 123 + + A S + ++ P+ +L RE + + + + + + D++ Sbjct: 91 TRTKKVAAAVTGSAVITKTISVPN-ALSNRELESHIELEAGQYIPYPLEEVNLDFAVLGP 149 Query: 124 ---DSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSH 174 DS + A +S+ + + + E + + I +A A+++ P + Sbjct: 150 SEKDSERVDVLLAACRSENIESRVASLELAGLTPAVIDVEAYAMEKVFPLIAGQ 203 >UniRef50_Q60BY8 Type 4 fimbrial biogenesis protein PilM n=10 Tax=Bacteria RepID=Q60BY8_METCA Length = 380 Score = 56.7 bits (135), Expect = 9e-07, Method: Composition-based stats. Identities = 22/179 (12%), Positives = 67/179 (37%), Gaps = 10/179 (5%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRE-- 65 +G+ + + + R ++ + +PL + + D + + ++ + ++ Sbjct: 39 LGIDISAAAVKLLELSRKNGGYQVESYGVVPLPRNTVVDNTLAEPDNVSAAVRAVVKQSG 98 Query: 66 LPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDS 125 RH + +A P S + + P+ +L E A + + + + + D+ Sbjct: 99 TALRHAV-VAVPGSVVITKRIALPA-NLEGDELEAQIELEADQYIPHAREEVSLDFEVLG 156 Query: 126 LSP------AYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCL 178 +P + A + + + +++ E + V + ++ A++R + L Sbjct: 157 KNPKNPDLLDVLLVATRRENVEDRVSVLENAGLGVEIVDVESYAIERAFELVRDQLPPL 215 >UniRef50_B3E9T0 Type IV pilus assembly protein PilM n=8 Tax=Deltaproteobacteria RepID=B3E9T0_GEOLS Length = 352 Score = 56.3 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 25/171 (14%), Positives = 58/171 (33%), Gaps = 11/171 (6%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELP 67 +G+ + V + + L +PL + I D ++D + + L Sbjct: 12 VGIDIGSSSVKLVQLWQTRDGYQLLNAAIMPLPPEAIVDNSLMDTAAVVDAVKNLVASLG 71 Query: 68 QRHH-IMLAFPASRTLQRSFPRPSMSLGERE-QTAWLSGTMARELDMDPDSLRFDY---- 121 + + + + + R P M+ E E Q +W + + D + D+ Sbjct: 72 IKSKDVACSISGNAVIIRKIILPVMTSEELEDQISW---EAEQYIPFDIKDVHIDFQILG 128 Query: 122 --SEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPF 170 S D + A++ + + L + ++ + D+ A+Q Sbjct: 129 QDSIDPSKIQVLLVASKKDIINDYVALFNDAGLSLNVMDVDSFAVQNAFEL 179 >UniRef50_A5D357 Tfp pilus assembly protein, ATPase PilM n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D357_PELTS Length = 348 Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 29/170 (17%), Positives = 56/170 (32%), Gaps = 10/170 (5%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL-PWSREL 66 +GL + AV + + L R+ + +++G + D + +A L W Sbjct: 10 VGLDIDAGVIRAVELKGRTRAAALAAAGRIEIPAGAVEEGAVADVEVVAGALKELWKDAR 69 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL 126 +++ L R P + + E+ + + + L D+ Sbjct: 70 IGSRDVIVGVSNQVVLMRIARLPKVPANKLEKV--VRFQAGDYFPIPLEQLVLDFFLIGE 127 Query: 127 SPA-------YNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLP 169 + AA+ + L LL + AI + AL R LP Sbjct: 128 VEGGDGPEMEVLLVAARRENLGGLLDALSAASLRPLAIDASSLALLRTLP 177 >UniRef50_B7GH54 Tfp pilus assembly protein, ATPase PilM n=8 Tax=Bacillaceae RepID=B7GH54_ANOFW Length = 322 Score = 55.1 bits (131), Expect = 2e-06, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 55/164 (33%), Gaps = 12/164 (7%) Query: 12 LQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLP----WSRELP 67 ++ V + + L PL I++DG+IVD +QL + W Sbjct: 15 IKDHVIRYVELKQKQP-LVLHTCEEWPLPEGIVRDGKIVDEEQLTHIMEQCVDMWKM--- 70 Query: 68 QRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSLS 127 + I P + R+ P P E ++ A + + + FDY+ + Sbjct: 71 KHRRIRFLVPDPLVVVRNIPLPKDIAHEDIRSYLFMEIGA-SIPLPFEDAVFDYTVLEKT 129 Query: 128 PA---YNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFL 168 + AA + + L E +++ +L R Sbjct: 130 KEALHVLLFAAPETNVMQYVELFETVKLKPIVADISPLSLYRLF 173 >UniRef50_Q1NMN0 Type IV pilus assembly protein PilM n=2 Tax=Deltaproteobacteria RepID=Q1NMN0_9DELT Length = 376 Score = 54.7 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 24/174 (13%), Positives = 59/174 (33%), Gaps = 9/174 (5%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSREL- 66 +GL + A + G L+ + + I DG +V+ + +A + L Sbjct: 35 LGLDIGSHAVKACELRHGPAGYHLETLGSALMPPEAIDDGALVEPEAVAGVISGLLTNLK 94 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL 126 + + ++ + + P + E ++ + + D D + D + Sbjct: 95 SKNRRVAISVSGYSVIVKRVTLP--VMEPAELENYIHDEAEQYIPFDIDDVYLDCHDLQT 152 Query: 127 SPA------YNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSH 174 + A + AA+ + + L + + L + + DA +L+ Sbjct: 153 NSAGEEYTDVMLVAAKKELVDGYLEMLDSLGLTTVVVDVDAFSLENAFEAAADP 206 >UniRef50_B7J635 Type IV pilus assembly protein PilM n=2 Tax=Acidithiobacillus RepID=B7J635_ACIF2 Length = 354 Score = 54.3 bits (129), Expect = 4e-06, Method: Composition-based stats. Identities = 26/175 (14%), Positives = 58/175 (33%), Gaps = 8/175 (4%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLP-WSREL 66 +GL + V + + ++ L + D I+DA+ + + + R Sbjct: 10 LGLDISPDAVKLVELSKPRGGIRVEHADSEALPPGAVNDRDILDAEAVRRAVRAILERSR 69 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYS---E 123 + + A PA+ + + P L E + + + D++ FD++ Sbjct: 70 IRTKAVATALPANAAIVKVIALPE-DLDEVGMEEQIRFESGQYIPYSIDAVNFDFAVLGP 128 Query: 124 DSLSPAY---NVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQ 175 D+ Y + A + + + + E + + AL L S Sbjct: 129 DANRRGYNHILLVACKKEAVEDRAAVLEEAGLKPKIVDVKPFALWLLYEHLASVS 183 >UniRef50_D0Z1J0 Type IV pilus biogenesis protein PilM n=5 Tax=Photobacterium RepID=D0Z1J0_LISDA Length = 332 Score = 54.3 bits (129), Expect = 4e-06, Method: Composition-based stats. Identities = 31/189 (16%), Positives = 65/189 (34%), Gaps = 16/189 (8%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELP 67 +G+ + AV + + ++ L + + L + D V++ L + + LP Sbjct: 8 VGIDIGSHSIKAVVVQQKKEQLELAAFAEIVLSTPAVNDQHSVNSTVLLSAMRKLKKHLP 67 Query: 68 QRH-HIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL 126 + ++LA P S + + SL + E +S + D L D+ + Sbjct: 68 RAAKRVVLALPDSAVISKIVQL-DTSLSDDETEFAISQALGASSPFPLDELWLDFYPLNN 126 Query: 127 SP---------AYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQC 177 S + + AA+ ++ L +A++ + + L L Sbjct: 127 SDRFQDIGSTVPFQIFAARRDTISARLEVAKKAGFKTQVMELQTNGLLWLAEHLTEMS-- 184 Query: 178 LAWRDNEQW 186 EQW Sbjct: 185 ---GLQEQW 190 >UniRef50_Q5E2F4 Pili assembly protein PilM n=4 Tax=Gammaproteobacteria RepID=Q5E2F4_VIBF1 Length = 333 Score = 54.0 bits (128), Expect = 5e-06, Method: Composition-based stats. Identities = 27/185 (14%), Positives = 58/185 (31%), Gaps = 14/185 (7%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELP 67 GL + AV++ + L + + L + D ++ ++L L ++L Sbjct: 7 TGLDVGHHSIKAVSVRLKKGQLDLVSSFEVLLPESVFVDTNNLNVEELKPYLSRIKKQL- 65 Query: 68 QRHHIMLAFP-ASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDS- 125 + + +AF ++ + L ERE ++ + D L DY Sbjct: 66 KLNQKQVAFSIPDSSITSKVVQIDSQLDERETEFAIAHNFEQHSSFSSDDLNIDYVASEH 125 Query: 126 ------LSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASAL-----QRFLPFLPSH 174 + Y V A + + + E + ++AL + + Sbjct: 126 RGTGSLQTITYQVFATRKDLVNSRQRCFESAGLKPVLADAHSNALLTLWQRAIAVYPDKK 185 Query: 175 QQCLA 179 L Sbjct: 186 NWMLI 190 >UniRef50_A6D0C0 Fimbrial assembly protein PilM, putative n=1 Tax=Vibrio shilonii AK1 RepID=A6D0C0_9VIBR Length = 327 Score = 53.6 bits (127), Expect = 7e-06, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 61/181 (33%), Gaps = 12/181 (6%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 MA + W G+ + AV + + + L I D + Q+ K L Sbjct: 1 MA-RKWITGIDIGHHSTKAVVLAYEGSDIKIVNQLELNGCAAIFADPYTLKHQETVKKLK 59 Query: 61 PWSRELPQ-RHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRF 119 + +P R +A P S + + L E + M+ + D ++L Sbjct: 60 ILRKIVPIFRKQAAIAIPESTVVSKVINL-DARLVNDELEYAVHQAMSYQTPYDSEALAI 118 Query: 120 DYS---------EDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPF 170 DY + + AY V A+ + + + + L I+ + AL+ Sbjct: 119 DYVAVPPQNEPHPNQETAAYQVHVARHNIIDNRIQVVKALGFKPQLISTNIHALRSVQKL 178 Query: 171 L 171 + Sbjct: 179 V 179 >UniRef50_C0DV42 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DV42_EIKCO Length = 351 Score = 53.2 bits (126), Expect = 8e-06, Method: Composition-based stats. Identities = 30/193 (15%), Positives = 66/193 (34%), Gaps = 18/193 (9%) Query: 8 IGLHLQQQEAVAVAIVRGAKE-CFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSREL 66 +G+ + V + L+ + PL +I +G I D QL L ++L Sbjct: 9 LGVDITPTAINMVHLAGSVPGNLRLENYAIQPLPKGVIINGNIEDHDQLVSYLQQAYQQL 68 Query: 67 PQRHH-IMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDS 125 + A P + T ++ + ++ ++ + D+L +D+ + Sbjct: 69 GSSCKNVTAALPQALTNIQTITY-DARSSDLPVDEFVELEASQ--TIGSDNLSYDFQVTA 125 Query: 126 --LSPAYN---VTAAQSKELATLLTLAERLRVHVSAITPDASALQR--------FLPFLP 172 + + AA+ ++ L + +S + D A+ F P L Sbjct: 126 ELQNGNVQEIVMAAAKRDDVDLRTDLFADADIPLSQLDVDTFAVVNAFSVWIDQFAPDLE 185 Query: 173 SHQQCLAWRDNEQ 185 + + D +Q Sbjct: 186 HQKLAIFHVDEDQ 198 >UniRef50_B9ZRR4 Type IV pilus assembly protein PilM n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZRR4_9GAMM Length = 355 Score = 52.8 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 22/164 (13%), Positives = 62/164 (37%), Gaps = 8/164 (4%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTL-LPWSREL 66 +G+ + + + R K ++ + PL + ++ D D + + L R Sbjct: 12 LGVDVSSAAVKVLELARQGKGYRVEAFAVEPLPDGVMVDKVCQDTEAVGSALARAVKRSG 71 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL 126 + H +A P+S + ++ + L + E + + + + + D+ Sbjct: 72 TKLKHCAMAVPSSAVITKTIQMSAT-LSDTELEGQVFVEADQYIPYTLEEVNLDFQVLGK 130 Query: 127 SP------AYNVTAAQSKELATLLTLAERLRVHVSAITPDASAL 164 + V A++ + + + + +AE ++ + +A A+ Sbjct: 131 NEKNPQLVDVLVVASRRENVDSRVAIAESAKLTPELVDVEAYAI 174 >UniRef50_Q7NHV1 Glr2434 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NHV1_GLOVI Length = 343 Score = 52.8 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 27/175 (15%), Positives = 58/175 (33%), Gaps = 17/175 (9%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELP 67 +G+ + ++ + + K L+ P + GR+ + + +A+ L R+L Sbjct: 18 MGVEIAPEQITIAQLEKRGKGLGLKHLVTAPTPAGAVAGGRVEEPEAVAEVL----RDLI 73 Query: 68 QRHHIM-----LAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYS 122 H + A P + R P+ + + L+ L + D+ Sbjct: 74 ADHRLKPGPVATAIPGREAVIRLIRLPADLQADELREVVLNQEAELYLPFSRNDAFVDFQ 133 Query: 123 EDSLS--------PAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLP 169 + + + AAQ + + L R + + + AL R L Sbjct: 134 PLAAAVDPDGVKRQEVLLVAAQLSVVNSYLEALRRAGLTARVVDIASFALVRALR 188 >UniRef50_Q1QZY8 Type IV pilus assembly protein PilM n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QZY8_CHRSD Length = 356 Score = 52.4 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 66/171 (38%), Gaps = 8/171 (4%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTL-LPWSREL 66 +G+ + + + + + PL + + RI D ++A TL Sbjct: 14 VGVDITSATVKLIELESSGAGHRIASYAVRPLHEGAVVERRIRDLDEVANTLTRAVEHAR 73 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL 126 P + A PAS + ++ P+ SL + E A + R + + + FD+ L Sbjct: 74 PHSRRAVAAVPASAAITKTLTYPA-SLTDDEIEARIQLESERHIPFPLNEVAFDFQRLGL 132 Query: 127 SPAY------NVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFL 171 + Y + A + +++ L + R + +A+ + A++R L Sbjct: 133 NARYPDQQDILLVACRLQDVDRLADVLRRAGLEPAAVDVETFAMERAAGEL 183 >UniRef50_Q72IW8 Pilus-associated protein pilM n=6 Tax=cellular organisms RepID=Q72IW8_THET2 Length = 377 Score = 52.0 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 47/135 (34%), Gaps = 11/135 (8%) Query: 38 PLENDIIKDGRIVDAQQLAKTLLPWSREL-PQRHHIMLAFPASRTLQRSFPRPSMSLGER 96 P ++ +G + + LA+ + E ++ +++ A + R P M L E Sbjct: 44 PTPPGLLMEGMVAEPAALAQEIKELLLEARTRKRYVVTALSNLAVILRPIQVPKMPLKEM 103 Query: 97 EQTAWLSGTMARELDMDPDSLRFDYSEDS--------LSPAYNVTAAQSKELATLLTLAE 148 E+ + R + D + D++ + V AA+ + +A +L Sbjct: 104 EEA--VRWEAERYIPFPIDEVVLDFAPLTPLSEVQEGEQVQVMVAAARQEAVAGVLEALR 161 Query: 149 RLRVHVSAITPDASA 163 + + A Sbjct: 162 GAGLVPVVLDVKPFA 176 >UniRef50_B1I3G2 Type IV pilus assembly protein PilM n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I3G2_DESAP Length = 345 Score = 50.9 bits (120), Expect = 4e-05, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 65/210 (30%), Gaps = 13/210 (6%) Query: 34 WWRLPLENDIIKDGRIVDAQQLAKTL-LPWSRELPQRHHIMLAFPASRTLQRSFPRPSMS 92 W R+ L + DG + + + K L WS ++L L R P M Sbjct: 39 WGRVSLPPGAVVDGMVSQPELVGKALAELWSAGRITSREVVLGVVNREVLVRFAVVPVMP 98 Query: 93 LGEREQTAWLSGTMARELDMDPDSLRFDYSEDSLSPA-------YNVTAAQSKELATLLT 145 + + L + D+ +DY+ P + AA+ + L L Sbjct: 99 RTK--LFGVIRHHARDLLPIPLDTAVWDYTVIGERPGLESRMFELLLVAARREMLDGFLL 156 Query: 146 LAERLRVHVSAITPDASALQRFLPFLPSHQQCLAWRDNEQWLWATRYSWGRKLAVGMTSA 205 R+ I + AL R +P P+ + + G S Sbjct: 157 ALAFARLEPRDIDVASLALLRVMPPSPADGAVVLVDLGNGSSTVLVIARGMLRLARFVSV 216 Query: 206 K-ELAAALSVDPESVAICGEGG--FDPWEA 232 E AA + A+ G GG W A Sbjct: 217 SLEAAAGMLGCSVEEALAGPGGTAHRQWPA 246 >UniRef50_A1SFR2 Type IV pilus assembly protein PilM n=1 Tax=Nocardioides sp. JS614 RepID=A1SFR2_NOCSJ Length = 383 Score = 50.9 bits (120), Expect = 4e-05, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 59/172 (34%), Gaps = 15/172 (8%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL-PWSREL 66 +GL + A V G + L+R+ +LPL + +++ G + D + L + L WS+ Sbjct: 6 VGLDIGSSGVRAAEFVPGRRRPTLRRFAQLPLPSGVVRAGVVADGEALTEALKELWSKGK 65 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL 126 ++ L + L R M + + L + L D D+ Sbjct: 66 FGSRNVALGVANAGVLVRQLDLDWMPPADFRKA--LRYQVQDVLPFSVDEANLDHHLLEE 123 Query: 127 SPAY------------NVTAAQSKELATLLTLAERLRVHVSAITPDASALQR 166 + AA + + A R R+ + + AL R Sbjct: 124 LDVVGEDGTARRVARILLVAASRDMVDAFVDSARRARLRIQTVDLLPFALLR 175 >UniRef50_C6IYF3 Predicted protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IYF3_9BACL Length = 319 Score = 49.3 bits (116), Expect = 1e-04, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 66/169 (39%), Gaps = 13/169 (7%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPW--SRE 65 IG+ + + V ++R LP++ ++ +DG + D + + W R Sbjct: 18 IGITIDEDGIRFVKFDAKRG--IVERAGLLPVDAELNEDG-VPDVSGFTEMVKRWANRRG 74 Query: 66 LPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDY---- 121 L + + LA P S++ R P +S ++ + L + L + DY Sbjct: 75 LAGK-KVRLAAPTSQSFIRLLQVPKVSKRQQRRVTELEIEGSIRLPF--EDPVIDYHWIE 131 Query: 122 -SEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLP 169 E+ + V A + +++ E+ + + A+ A AL R L Sbjct: 132 EREEGEALLTFVAAVPRPIIQEMVSSLEQAGLRLEAVDLAAIALSRILR 180 >UniRef50_A4J3B9 Type IV pilus assembly protein PilM n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J3B9_DESRM Length = 348 Score = 49.0 bits (115), Expect = 1e-04, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 59/178 (33%), Gaps = 12/178 (6%) Query: 1 MAF--KIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKT 58 MAF +GL + V + A+ L ++ + + + DG +VD Q +A+ Sbjct: 1 MAFFKPAGAVGLQIDTGIIRVVELKGTARFASLVTAGQIDIPDHAVVDGIVVDVQTVAQA 60 Query: 59 LL-PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSL 117 + W R + ++L R P + + Q L +D L Sbjct: 61 IRDLWERHNIKDREVVLGICNQGVFMRYTTFPKIPDKKLAQA--LRFQAGEYFPIDNSQL 118 Query: 118 RFDYSEDSLSP-------AYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFL 168 FDY+ + AA+ L L E + + AL R L Sbjct: 119 VFDYAVLGEDKKANNIKLKVLLVAARKDLLDISLRTLEAAHLQPKVVDISYLALLRTL 176 >UniRef50_B5WSN7 Putative uncharacterized protein n=10 Tax=Burkholderia RepID=B5WSN7_9BURK Length = 331 Score = 49.0 bits (115), Expect = 1e-04, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 67/187 (35%), Gaps = 22/187 (11%) Query: 9 GLHLQQQEAVAVAIVRGAKEC---FLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRE 65 G+ + Q V + + ++ L+ ++PL + IVD Q +A+ L + Sbjct: 21 GIDVGSQNVRLVVLSQRSRAWGELHLEYMSKVPLAAGAMAGTEIVDRQAVARALRDAFAD 80 Query: 66 LPQRH-----HIMLAFPASRTLQRSFPRPSMSL---GEREQTAW--------LSGTMARE 109 LP+ +A PAS TL + P ++ E + R Sbjct: 81 LPRVCAAHALRCAMAVPASATLTTTVPLARLAAQSDCAEEDGGVALAGLAPAVMSEAERI 140 Query: 110 LDMDPDSLRFDYSEDSLS---PAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQR 166 ++ +L D+ D + + + A + L + A + + AI + A R Sbjct: 141 AGLERHALAVDWYVDEIPSPVRSVRIAATARQHLEARIECAATAGISLCAIDGEPHAALR 200 Query: 167 FLPFLPS 173 + + S Sbjct: 201 AMRYAAS 207 >UniRef50_Q1IXL4 Type IV pilus assembly protein PilM n=5 Tax=Deinococci RepID=Q1IXL4_DEIGD Length = 392 Score = 48.6 bits (114), Expect = 2e-04, Method: Composition-based stats. Identities = 31/173 (17%), Positives = 58/173 (33%), Gaps = 16/173 (9%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELP 67 IG+ + VA+ G LQ +P ++DG +++ Q +A L E Sbjct: 16 IGVEIGTSTIKVVALRPGTPPV-LQHAVMVPTPIGSMRDGLVIEPQAVANELKNLLAE-- 72 Query: 68 QRHHIM---LAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDY--- 121 R A P + R+ P M + ++ + R L D + D+ Sbjct: 73 HRITARHAVTAVPNQSAVTRNIMVPRMERKDLQEA--IKWEAERYLPYPIDEVNLDFDLL 130 Query: 122 -----SEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLP 169 + + AA S+ +A + + + + + A R L Sbjct: 131 DDPATIPEDGQMEAVIAAAPSEAVARQVEVLRLAGLEPIIVDLKSFAALRALR 183 >UniRef50_A0LFN4 Type IV pilus assembly protein PilM n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LFN4_SYNFM Length = 350 Score = 48.6 bits (114), Expect = 2e-04, Method: Composition-based stats. Identities = 19/168 (11%), Positives = 54/168 (32%), Gaps = 9/168 (5%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELP 67 +GL + + L +P+ + +GR+ ++ + + L Sbjct: 9 LGLDIGSHSVKLTQLKAKEGRLTLANVGLVPVPREAFNEGRVNKPDLVSNCIKHLTSHLK 68 Query: 68 -QRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL 126 + + A + + P+M E E + + + + + + + + DY + Sbjct: 69 VKERTVATAVSGYEVMIKKIELPTM--TEEELDSRMHAELGQYIPYNIEEVDVDYQVLDV 126 Query: 127 SP------AYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFL 168 + + AA+ + + + + + + D AL Sbjct: 127 AKDRPNYMGVLLVAAKKESIGDCVGIVRAAGLDTDVVDVDFFALSNAF 174 >UniRef50_Q1Q8Q3 Type IV pilus assembly protein PilM n=3 Tax=Moraxellaceae RepID=Q1Q8Q3_PSYCK Length = 351 Score = 48.2 bits (113), Expect = 2e-04, Method: Composition-based stats. Identities = 24/173 (13%), Positives = 58/173 (33%), Gaps = 8/173 (4%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPW-SREL 66 IG+ + V I R L+ + L ++ D IVD + + T+ R Sbjct: 12 IGVDICTTSVKLVDIQRQQGVFHLRSYGTEILPEGVVIDKLIVDTEVVGNTIAGLARRCQ 71 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYS---E 123 A S + + M L + E+ A + + + + + D+ Sbjct: 72 AAGSSAATAVSGSAVITKIIDM-DMVLSDVEREAQIRLDADQYIPYPLEDVNLDFEVLGP 130 Query: 124 DSLSPAY---NVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPS 173 ++ + A++S+ + + + + ++ A++R + Sbjct: 131 SLINDDMVQVLLAASRSENVDQRVDALTFGGLQTKVMDIESHAIERAFGLMAD 183 >UniRef50_A5GWJ6 Putative uncharacterized protein SynRCC307_2352 n=1 Tax=Synechococcus sp. RCC307 RepID=A5GWJ6_SYNR3 Length = 308 Score = 48.2 bits (113), Expect = 3e-04, Method: Composition-based stats. Identities = 36/221 (16%), Positives = 71/221 (32%), Gaps = 18/221 (8%) Query: 7 QIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQL----AKTLLPW 62 ++ + ++ +A + LQ W + PL + +++ G + + L LL Sbjct: 24 RVAVAMEADALTLLAYQTIGGQLQLQSWQQAPLPSGVVEAGVPLLTEALGDLIGDVLLQG 83 Query: 63 SRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGT-MARELDMDPDSLRFDY 121 + P P + RS P+ + E WL G A L + Sbjct: 84 GLQAP---GARALLPPEAVVLRSLKLPAGRQPDAEIIPWLMGQEAALALPFPLAEAAVSW 140 Query: 122 SEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLAWR 181 + + + +++L + + + + P A++R LP Q W Sbjct: 141 QQ--RGDHWLLACMPNEQLDRWIDTFAIAGLDLHGLEPSVLAVERLLPAPLQQQDPQQWT 198 Query: 182 -----DNEQW---LWATRYSWGRKLAVGMTSAKELAAALSV 214 E W LW + + EL A ++ Sbjct: 199 GSLDVRGESWQLLLWRGAVPLRQLSLASASGLDELQAVIAE 239 >UniRef50_B6J4A0 Putative uncharacterized protein n=6 Tax=Coxiella burnetii RepID=B6J4A0_COXB1 Length = 264 Score = 47.8 bits (112), Expect = 4e-04, Method: Composition-based stats. Identities = 27/179 (15%), Positives = 66/179 (36%), Gaps = 20/179 (11%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 MA QIG+ ++ E AV + R ++ +P++ D+ Q L + Sbjct: 1 MASS--QIGIEIETHEIRAVKVRRREDCLHIEGRAIIPIKTDLT--------QALLELQT 50 Query: 61 PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGE-REQTAWLSGTMARELDMDPDSLRF 119 W P +++ + ++ P S + + L + + + + Sbjct: 51 QW----PGLAKAVVSLDYQKVFSKTIPFDSTLTKNGWQCS--LQHQLQSLFGLSAEEVYC 104 Query: 120 DY---SEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQ 175 DY + P ++ A + E+ + + + ++ + A+ + A R + F+ + Sbjct: 105 DYYCLTTAQKPPTCHLFAVKKSEVDEITSACRKAKIRLIAVDINILACTRLIYFVNAKA 163 >UniRef50_A0KN34 Type IV pilus biogenesis protein PilM n=3 Tax=Aeromonadaceae RepID=A0KN34_AERHH Length = 356 Score = 47.4 bits (111), Expect = 4e-04, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 61/174 (35%), Gaps = 7/174 (4%) Query: 9 GLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELPQ 68 G+ Q AV I + L+ + + D ++ D ++++++L R + Sbjct: 19 GIDFGSQTIKAVTITGRPGKLHLESVAEVATPKGTLVDYQLQDIERVSQSLKALKRLISG 78 Query: 69 RHH-IMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSE---- 123 + A S + + +LGE E + + + D + D+ Sbjct: 79 SSQYVATAVTGSNVITKVIQV-DAALGENELENQVQLEAEQLIPFPLDEVSLDFEILGKV 137 Query: 124 -DSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQ 176 D ++AA+++ ++ +T + + A AL R + Q Sbjct: 138 NDQERREVLLSAARTESVSGRVTALAEADMTTKVVDVGAHALGRAVLACLPELQ 191 >UniRef50_Q1D0B0 Type IV pilus biogenesis protein PilM n=7 Tax=Myxococcales RepID=Q1D0B0_MYXXD Length = 395 Score = 47.4 bits (111), Expect = 5e-04, Method: Composition-based stats. Identities = 24/166 (14%), Positives = 53/166 (31%), Gaps = 14/166 (8%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKE----CFLQRWWRLPLENDIIKDGRIVDAQQLA 56 MA +GL + + + K LQ + PL + I DG ++++ + Sbjct: 36 MAKGKLVLGLDIGSTSIKMILLKEQRKRGEVIYALQSFGMKPLPPEAIVDGALMNSTAIV 95 Query: 57 KTLLPWSRELPQRHH-IMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPD 115 + + EL + + + + + P MS E E++ + + + D Sbjct: 96 QAVQDLMSELKVKGKDVAIGVSGHSVIIKKIQMPRMSQDELEES--IQWEAEQYIPFDVK 153 Query: 116 SLRFDYSEDSLSPA-------YNVTAAQSKELATLLTLAERLRVHV 154 + D + AA+ + T+ + Sbjct: 154 DVNIDTQILDGGGNDATGQMDVLLVAAKKDMINDYTTVVSEAGLAP 199 >UniRef50_Q6AS38 Related to fimbrial assembly protein PilM n=1 Tax=Desulfotalea psychrophila RepID=Q6AS38_DESPS Length = 354 Score = 47.4 bits (111), Expect = 5e-04, Method: Composition-based stats. Identities = 20/180 (11%), Positives = 55/180 (30%), Gaps = 11/180 (6%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELP 67 +G+ + + + L L + DG + + + + + + L Sbjct: 15 VGIDIGSHSVKICQLKKNGSRYSLLSLGTALLPEGAVDDGILNEPSLVGEIVKNLLQNLR 74 Query: 68 -QRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYS---- 122 + I + + + +M E+ + + + D D + D+ Sbjct: 75 IRNKKIGFSISGYSVIVKKIVLDAMEDALLEEH--ILAEAEQYIPFDQDDVYLDFQDLKT 132 Query: 123 ---EDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLA 179 + V AA+ + + L + E + + D A + +++ +A Sbjct: 133 NTDPQDRTDIMLV-AAKKEVVQDYLFMFEEQGLTPVLVDVDGFAFENAFEHAHPNEKDVA 191 >UniRef50_B2I0J8 Tfp pilus assembly protein, ATPase PilM n=10 Tax=Gammaproteobacteria RepID=B2I0J8_ACIBC Length = 352 Score = 47.0 bits (110), Expect = 5e-04, Method: Composition-based stats. Identities = 20/173 (11%), Positives = 66/173 (38%), Gaps = 8/173 (4%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTL-LPWSREL 66 +G+ + + + + +++ + +PL + + + I++ + +A+ L + Sbjct: 13 MGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLAN 72 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSE--- 123 PQ H +A P S + ++ + + E+ + + + D + D+ Sbjct: 73 PQTTHAAIAVPTSTVIHKTIEM-DADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPD 131 Query: 124 ---DSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPS 173 + + A +++ + T + + E ++ ++ A++R Sbjct: 132 RLTNPNRVNVLLVATRTENVETRVEVLELADLNPKLADVESYAVERAFSVFAD 184 >UniRef50_UPI0001C16347 Type IV pilus assembly protein PilM n=2 Tax=Nostocaceae RepID=UPI0001C16347 Length = 360 Score = 46.6 bits (109), Expect = 7e-04, Method: Composition-based stats. Identities = 39/247 (15%), Positives = 77/247 (31%), Gaps = 27/247 (10%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELP 67 +G+ L + R + ++ P+ II +G I D ++ + + E Sbjct: 25 VGVELTGDRINIAQLHRVRQGLRIESLSTFPVPEGIIVNGEICDCPRMGEIISQAIVESK 84 Query: 68 -QRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD-----Y 121 + I P + R P P G+ ++++ L + D Y Sbjct: 85 IKTTQIRTCIPEKHAIVRIIPAPLELEGQELYDSFINQEAGLYLPYPREEADIDCQKLGY 144 Query: 122 SEDS---LSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCL 178 D + A + + + + + + + + A+ R + +Q L Sbjct: 145 FIDQDGIEKAQILLVATRREITDSYIHTFALAGLKIEVLEIKSFAIIRTI-----QKQLL 199 Query: 179 AWRDNEQWLWATRYSWGRKLAVGMTSAKELAAALSVDPESVAICGEGGFDPWEAVSV--- 235 R E L E+A ++ P+ G G F A+S Sbjct: 200 ILRPEE----------AVVLVNIEFDHTEVAVIINGVPQFSRTIGIGTFQLETAISTPIS 249 Query: 236 RQPPLPP 242 R+ LP Sbjct: 250 REISLPV 256 >UniRef50_B0JRP3 Type IV pilus assembly protein n=26 Tax=Cyanobacteria RepID=B0JRP3_MICAN Length = 371 Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 24/172 (13%), Positives = 60/172 (34%), Gaps = 11/172 (6%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELP 67 +GL + + I + + L + + I ++G+IVD+ LA+ + +E Sbjct: 16 VGLEITPERINIAQIAKQGQNYKLVKCCSSDIPEGIFEEGKIVDSPALAELIQEVLKE-N 74 Query: 68 QRHHIMLAFPASRTLQRSFPRPSMSLGEREQTA--WLSGTMARELDMDPDSLRFDYSE-- 123 + + +A P S + ++ L+ + L + + DY + Sbjct: 75 KINSKRVATAVPMRESIIRIIPIPSELDDQELRNLVLNHEASLYLPYPREEVDLDYQKLG 134 Query: 124 ------DSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLP 169 + A + + + ++ + V + ++ AL R + Sbjct: 135 YFQDEDGIEKVQVLLVATRREITDAYMETFQQAGLQVDVLEINSFALIRTIR 186 >UniRef50_C9R931 Type IV pilus assembly protein PilM n=1 Tax=Ammonifex degensii KC4 RepID=C9R931_AMMDK Length = 334 Score = 45.9 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 52/167 (31%), Gaps = 12/167 (7%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELP 67 +G+ + E I + RLP + G + D ++L L P Sbjct: 15 VGIDVGTAETKMAEIRVTNGGPEVLALRRLPSPPGVW--GDVFDEEKLIGVLRELE---P 69 Query: 68 QRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLR-----FDYS 122 ++ P + + R P MS EREQ + + R L D L + Sbjct: 70 GTREVISCLPGDKVVSRILRLPPMSDREREQA--VRLEVERFLPTPVDELIIRSVWLEDK 127 Query: 123 EDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLP 169 + A + + L R + + + A AL R Sbjct: 128 AGGEGRRCLILAVPAALVYRYHALFSRAGLVLGVLDLPAFALHRLFQ 174 >UniRef50_A5KSX7 Type IV pilus assembly protein PilM n=3 Tax=candidate division TM7 RepID=A5KSX7_9BACT Length = 348 Score = 45.5 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 70/179 (39%), Gaps = 11/179 (6%) Query: 10 LHLQQQEAVAVAIVRGAKE-CFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELPQ 68 L + V + G+ + L ++ P++ I Q+L + + + Sbjct: 13 LDIGTTAIRVVQLSHGSNDTWNLVKYGHAPVDIKISTSDSAQAQQKLGEVITTAIGQSGV 72 Query: 69 RHH-IMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSE---- 123 + ++L P+S++ P ++ E+E + + + M PD + D++ Sbjct: 73 KTKDVVLGIPSSKSFTTVVEVP--NMSEQELRGTIKYQADQYIPMSPDEAKVDWALLGQS 130 Query: 124 --DSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASAL-QRFLPFLPSHQQCLA 179 D+ + + + + + L L E L ++V A PD+ A+ + LP + L Sbjct: 131 LHDAQKMEVLLASVANNYIESRLDLVEGLGLNVIAAEPDSIAMVRSLLPAGITDAWLLI 189 >UniRef50_A8VZF1 Cyclic nucleotide-binding n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VZF1_9BACI Length = 327 Score = 45.1 bits (105), Expect = 0.002, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 52/136 (38%), Gaps = 9/136 (6%) Query: 39 LENDIIKDGRIVDAQQLAKTLLPWSRELP-QRHHIMLAFPASRTLQRSFPRPSMSLGERE 97 L I+ G I + + + R+ + + + P L R P+ + + E Sbjct: 41 LPPGTIEGGVIKETETFQAIIGELKRQYKMAKGELYITLPNETNLIRRHQVPA-DVPDHE 99 Query: 98 QTAWLSGTMARELDMDPDSLRFDYSEDSLSPA-----YNVTAAQSKELATLLTLAERLRV 152 ++ + +EL + + FD S A +TA + + + L L L++ Sbjct: 100 LKGYIFNQLGKELHLPMEDPVFDLCIMSEQNAEKDLLLFITA--QEIIDSYLRLFYELKL 157 Query: 153 HVSAITPDASALQRFL 168 + A +L+RF+ Sbjct: 158 EPVVLDYAAISLERFI 173 >UniRef50_D0L236 Type IV pilus assembly protein PilM n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L236_HALNC Length = 365 Score = 44.3 bits (103), Expect = 0.004, Method: Composition-based stats. Identities = 29/202 (14%), Positives = 67/202 (33%), Gaps = 25/202 (12%) Query: 2 AFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTL-L 60 + K ++G+ + + + + + P+ ++D I D +A L Sbjct: 7 SSKNPRLGVDISSTAVKVLLLEKHRNGYRPVGFAIEPISPGAVQDKTITDTDVVAGALSR 66 Query: 61 PWSRELPQRHHIMLAFPASRTLQRSF----PRPSMSLGEREQTAWLSGTMARELDMDPDS 116 SR + HI++A P S +L R P L E+ + + + D Sbjct: 67 ALSRSRAKTKHIVMAVPTSASLSRVLNISNPGNEFELEEQ-----VRMESDQYIPFPIDE 121 Query: 117 LRFDYSE---------------DSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDA 161 + D+ + + + A ++ + + +AE + V + ++ Sbjct: 122 VSLDFEPLRPEAGSKQKKRQPNEDSTMQVIMAATRTTNVEARVAVAEAAGLSVDVMDVES 181 Query: 162 SALQRFLPFLPSHQQCLAWRDN 183 A+Q + + R Sbjct: 182 FAIQNAFTEIIAPTLTAEDRAQ 203 >UniRef50_Q4KJJ4 Type IV pilus biogenesis protein PilM n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KJJ4_PSEF5 Length = 353 Score = 43.9 bits (102), Expect = 0.005, Method: Composition-based stats. Identities = 21/161 (13%), Positives = 54/161 (33%), Gaps = 8/161 (4%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTL-LPWSREL 66 +G+ + +A+ R + ++ + R PL + + D I D + LA L W + Sbjct: 13 MGIDINATSVTLLALGRQGQGYRVEAYAREPLAPNTVLDQHIADPEALAAALSRAWLKTG 72 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSE--- 123 + +A + + P+ L E + + + + + D+ Sbjct: 73 SRLKGAAVAVVGEAVISKLIEMPAG-LHTDELEQQVRLEAGQYIPYPLEDVALDFEVQGP 131 Query: 124 ---DSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDA 161 + + A +++ + L T+ + + Sbjct: 132 VPGNPQRVQVLLVACRNERVEALETVLGLAGLTARVVDTQP 172 >UniRef50_B8FQ80 Fimbrial assembly family protein n=2 Tax=Desulfitobacterium hafniense RepID=B8FQ80_DESHD Length = 489 Score = 43.9 bits (102), Expect = 0.005, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 55/159 (34%), Gaps = 13/159 (8%) Query: 38 PLENDIIKDGRIVDAQQLAKTLLPWSRE------LPQRHHIMLAFPASRTLQRSFPRPSM 91 PL +IK G+++ L + + LP+ I + P R + P Sbjct: 41 PLPKGLIKQGKVLHLDTFLSILKGYLEQYKIDFQLPRNPKIDIGLPLQNQFIREYHLP-- 98 Query: 92 SLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSLSP-----AYNVTAAQSKELATLLTL 146 + +R +T L E+ + + L +DY + ++ ++ L+ ++ Sbjct: 99 WVKKRNRTGLLRYLAEEEIPIPEEELVYDYFLEEEKGPSRRLRVILSGIRNSVLSPVIFC 158 Query: 147 AERLRVHVSAITPDASALQRFLPFLPSHQQCLAWRDNEQ 185 + ++ + A R L F P D Q Sbjct: 159 FRKAGFEINKVCFSQLAWGRVLGFGPEGNTLFLREDEGQ 197 >UniRef50_Q2B6I7 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B6I7_9BACI Length = 326 Score = 43.6 bits (101), Expect = 0.007, Method: Composition-based stats. Identities = 32/170 (18%), Positives = 59/170 (34%), Gaps = 17/170 (10%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTL----LPWS 63 I + ++ + + L+ R L N II++G+I DA+ L L W Sbjct: 13 INITVKDHVVRMAELKNNKEPHVLRSEERY-LPNGIIREGKIQDAETLTAILEECVSEWK 71 Query: 64 RELPQRHHIMLAF--PASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDY 121 + +AF P + R P E E +L + + + + FDY Sbjct: 72 IK-----GKEIAFLVPDPVIIIRKLSIPQDVSAE-EIKGYLYMELGTSIHLPFEDPVFDY 125 Query: 122 SEDSLSPA----YNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRF 167 + + + AA + + +++ E R+ AL R Sbjct: 126 TILETGESGMKEILLFAAPEEIVHEYVSVFEEARLKPVLADISCLALYRL 175 >UniRef50_Q061N4 Putative uncharacterized protein n=1 Tax=Synechococcus sp. BL107 RepID=Q061N4_9SYNE Length = 579 Score = 43.2 bits (100), Expect = 0.008, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 52/167 (31%), Gaps = 14/167 (8%) Query: 27 KECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELP-QRHHIMLAFPASRTLQRS 85 L R+ L + ++ G D +++A L E + H + + P QR Sbjct: 21 NGIQLNHISRVQLPPEALERGVPTDPRKMAGLLQQICAEKKIRAHRVAVVLPPEVGFQRI 80 Query: 86 FPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSLSPA---------YNVTAAQ 136 P+ + + ++ FD S Y +TA Sbjct: 81 VELPTALSTDEARGYVQDAKNCIQIPFPLAQTDFDLSPVPFPGDTNSHGDHSPYLLTAIP 140 Query: 137 SKELATLLTLAERLRVHVSAITP-DASALQRFLP---FLPSHQQCLA 179 + ++ + + + ++S L+ LPSHQ L Sbjct: 141 QLLVDRIIETLQIADFELQLLELGNSSQLRAMALDFTVLPSHQVDLV 187 >UniRef50_P31768 Competence protein A n=18 Tax=Haemophilus influenzae RepID=COMA_HAEIN Length = 265 Score = 43.2 bits (100), Expect = 0.010, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 42/108 (38%), Gaps = 5/108 (4%) Query: 70 HHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSLSPA 129 + + PA T + P L +E + +EL + + L FDY L Sbjct: 64 LQFVASIPAHLTWSKVLMLP-QVLNAQECHQQCKFVIEKELPIFLEELWFDYRSTPLKQG 122 Query: 130 Y--NVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQ 175 + VTA + T L + +++ + ++A+ R +L + Q Sbjct: 123 FRLEVTAIRKSSAQTYLQDFQP--FNINILDVASNAVLRAFQYLLNEQ 168 >UniRef50_C1ZJR3 Tfp pilus assembly protein, ATPase PilM n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZJR3_PLALI Length = 415 Score = 42.8 bits (99), Expect = 0.012, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 57/175 (32%), Gaps = 10/175 (5%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPW-SREL 66 +GL LQ A+ + + L + D + + + L W L Sbjct: 12 VGLLLQAGSVRAIQL--DRSG-RVCGAAVENLASQT-SDSPLDYERAVIAILKRWWRNRL 67 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL 126 + ++L P+ + P + E Q A +D LR + D Sbjct: 68 FRGWQVVLGIPSHELWIHNARLPQVPSEELPQVARFEAEERLPYAVDEAELRLIVAGDVK 127 Query: 127 SPAYN-----VTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQ 176 + + A + + + + E + AI ++ AL RF + + ++ Sbjct: 128 QDGVSKHEVILLACRKTAIQQQIQICEHAGLVPQAIDTESHALIRFQRAVDNSEK 182 >UniRef50_C8WRG1 Tfp pilus assembly protein ATPase PilM-like protein n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WRG1_ALIAD Length = 322 Score = 42.8 bits (99), Expect = 0.013, Method: Composition-based stats. Identities = 27/182 (14%), Positives = 59/182 (32%), Gaps = 27/182 (14%) Query: 8 IGLHLQQQEAVAVAIVRGA---------KECFLQRWWRLPLENDIIKDGRIVDAQQLAKT 58 +G+ + + G L + R P + A L+ Sbjct: 14 VGVEICDAGLRIAEVEPGKPLRVSRLETAPWDLSQTVRDPYPTFAL-------ASILSHA 66 Query: 59 LLPWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLR 118 R ++ + +A P+ T+ R P ++GE+E + + + + + D Sbjct: 67 FDANRR---RKLTVHVALPSRFTVIRQLTLP--AVGEKELQSAIELQIQHNIHLPFDEAA 121 Query: 119 FDYS----EDSLSPAYNV--TAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLP 172 +DY + + + +V AA + ++ + + I A AL R + Sbjct: 122 YDYVRCEPPEDEADSVSVLLVAADKSRVNDVIQGFRAVGIRPKTIDIHALALYRLIRRFR 181 Query: 173 SH 174 Sbjct: 182 PD 183 >UniRef50_Q2BLX5 Type IV pilus assembly protein PilM n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLX5_9GAMM Length = 353 Score = 42.4 bits (98), Expect = 0.014, Method: Composition-based stats. Identities = 22/173 (12%), Positives = 56/173 (32%), Gaps = 6/173 (3%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELP 67 +G+ + VA+ + L+ + + L + DG I D ++ T+ + Sbjct: 13 VGVDVGSSSVKLVALSKSGNGFSLEAYAVVSLPPTAVIDGNIQDVIEVTTTIEKAVKVAG 72 Query: 68 QRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSE---D 124 + +A + + S + E E + + + D + D+ Sbjct: 73 GKMSSAVAAVPASAVITKKIEMSNAFTEFELEDQIKVEADQFIPYPLDEVALDFEVQGKV 132 Query: 125 SLSPAY---NVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSH 174 + + + A + ++ + + D A++R P L + Sbjct: 133 PNNDSLNKILLVACRKSDVEQREDAIGGAGLKCLVVDVDTYAVERAFPLLINE 185 >UniRef50_Q3A898 Putative uncharacterized protein n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A898_PELCD Length = 306 Score = 42.4 bits (98), Expect = 0.016, Method: Composition-based stats. Identities = 32/187 (17%), Positives = 58/187 (31%), Gaps = 16/187 (8%) Query: 8 IGLHLQQQEAVAVAIVRGAK-----ECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPW 62 +GL L + AV + R K + W + L+ D + + + + Sbjct: 7 VGLSLCEDGLRAVMVRRSRKQTQIIGWQSRSWPSVCLKPDYQRLNILEEDSFVNTVRETL 66 Query: 63 SR--ELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD 120 + R + L+ + + P R+ L + L +DP+ +R D Sbjct: 67 RSLGIINGRVALSLSDAVGKIVITDLNEPLK--RGRDGINLLKWQVREHLLLDPEEIRLD 124 Query: 121 YSEDSLSPA----YNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFL---PFLPS 173 + P V AA + L L + + D+ L F L Sbjct: 125 FQVLGTEPGGKTRVLVAAAAKEVLDQYENLLAAAGAIPALVLFDSLNLMHFYHSKRILTC 184 Query: 174 HQQCLAW 180 +AW Sbjct: 185 DHLLVAW 191 >UniRef50_A6FZH9 Fimbrial assembly protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FZH9_9DELT Length = 634 Score = 42.0 bits (97), Expect = 0.017, Method: Composition-based stats. Identities = 28/173 (16%), Positives = 55/173 (31%), Gaps = 12/173 (6%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDA---QQLAKTLLPWSR 64 +G+ L + I G + + W + + G D L Sbjct: 6 VGVDLGNRRVKIAVITSGFRGAQVMHVWEKSVSGTPGEGGDPTDPAIDTALKMIEERGLA 65 Query: 65 ELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSED 124 LP + + R L +FP R+ ++ + + + L D+ Sbjct: 66 GLPTGVCLPGGSGSYRVL--TFPFED----PRQIAQAVTFEADGQFPLPIEELAVDHLTI 119 Query: 125 SLSPA---YNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSH 174 V AA+ + + E ++++ +T A AL + L LP+ Sbjct: 120 KRGDGQGRALVVAAKRTTIQHVTARFELAKLNLKLVTTSALALAQALSTLPAP 172 >UniRef50_B3E8R7 Tfp pilus assembly protein ATPase PilM-like protein n=1 Tax=Geobacter lovleyi SZ RepID=B3E8R7_GEOLS Length = 306 Score = 40.9 bits (94), Expect = 0.040, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 54/161 (33%), Gaps = 13/161 (8%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDI----IKDGRIVDAQQLAKTLLPWS 63 IG+ + AV + A LQR R L + +K+ +++ +L Sbjct: 9 IGIEISHGGIAAVMLSCPAGRIVLQRATRTALPANTLQPSLKEAQVLQPAAFVNSLREAW 68 Query: 64 REL---PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD 120 L +R + L A L P E T L +A+ L M+P+ L+ D Sbjct: 69 GSLNLSTRRIALSLPDNAGLLLLTRLDEPWK--TRDEATGMLRWKLAKRLGMEPELLQLD 126 Query: 121 Y----SEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAI 157 + + S V + L + + + I Sbjct: 127 FHLLERKPDGSTDLLVALVHRTVIQQYEDLFQEAGLQPARI 167 >UniRef50_D0I3T9 Type IV pilus biogenesis protein PilM n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I3T9_VIBHO Length = 291 Score = 40.9 bits (94), Expect = 0.040, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 44/126 (34%), Gaps = 11/126 (8%) Query: 51 DAQQLAKTLLPWSRELPQRHHIMLAFPASRTL---------QRSFPRPSMSLGEREQTAW 101 + L + L ++L + +P + + +R P + E EQ Sbjct: 20 HSMSLEEALNTVKKQLRKACRAPWQWPVRQIMGVAQSNVATKRFPTSPD--ITENEQYVQ 77 Query: 102 LSGTMARELDMDPDSLRFDYSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDA 161 + ++ L + D L +DY S A + L +L+ + + ++ I Sbjct: 78 VGLQLSESLGLPMDDLLYDYRPLPGSDGVEAYACRKPMLKEILSALDAVGYKLTVIELQT 137 Query: 162 SALQRF 167 AL R Sbjct: 138 HALMRL 143 >UniRef50_A6VM68 Competence protein A n=1 Tax=Actinobacillus succinogenes 130Z RepID=A6VM68_ACTSZ Length = 278 Score = 39.7 bits (91), Expect = 0.088, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 54/141 (38%), Gaps = 13/141 (9%) Query: 57 KTLLPW------SRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMAREL 110 + L W +++ P R + +++ + ++ P L +E ++ T+ +EL Sbjct: 44 EFLTAWFIEHLTTKKRPLRFNYVVSLLPNHIWCKTLILP-QVLNTQECEQQVTATIEKEL 102 Query: 111 DMDPDSLRFDYSEDSLSPAY--NVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFL 168 + + L FDY + L ++ + + L + + VS + A A+ R Sbjct: 103 PLPLEQLWFDYRSEMLKQGMKLEISVVIQETAKSWLE--QYAPLSVSVLDNTAHAVFRAF 160 Query: 169 PFLPS--HQQCLAWRDNEQWL 187 +L L +E + Sbjct: 161 RYLKPELPNNTLYLYHDEHFC 181 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P45753 Uncharacterized protein yrfD n=83 Tax=Enterobact... 255 1e-66 UniRef50_B5XTU1 HofM protein n=5 Tax=Klebsiella RepID=B5XTU1_KLEP3 242 6e-63 UniRef50_Q7NA51 Similar to unknown protein YrfD of Escherichia c... 242 8e-63 UniRef50_A4WFI3 Putative uncharacterized protein n=2 Tax=Enterob... 236 5e-61 UniRef50_Q1CCN3 Type IV pilus biogenesis protein PilM n=35 Tax=E... 231 2e-59 UniRef50_C6CH35 Putative uncharacterized protein n=3 Tax=Enterob... 226 4e-58 UniRef50_C6C803 Putative uncharacterized protein n=5 Tax=Enterob... 226 5e-58 UniRef50_B2Q5V1 Putative uncharacterized protein n=4 Tax=Provide... 222 6e-57 UniRef50_C9Y279 Uncharacterized protein yrfD n=2 Tax=Cronobacter... 221 2e-56 UniRef50_D2U382 Putative uncharacterized protein n=1 Tax=Arsenop... 218 1e-55 UniRef50_D0FX05 Conserved uncharacterized protein n=4 Tax=Entero... 218 1e-55 UniRef50_C5BGR0 Putative uncharacterized protein n=2 Tax=Edwards... 189 8e-47 UniRef50_UPI0001C16347 Type IV pilus assembly protein PilM n=2 T... 176 6e-43 UniRef50_Q3JEG9 Type IV pilus assembly protein PilM n=57 Tax=Gam... 174 3e-42 UniRef50_B3E9T0 Type IV pilus assembly protein PilM n=8 Tax=Delt... 174 3e-42 UniRef50_Q60BY8 Type 4 fimbrial biogenesis protein PilM n=10 Tax... 169 1e-40 UniRef50_Q7NZT8 Type 4 fimbrial biogenesis protein PilM n=2 Tax=... 164 3e-39 UniRef50_B2I0J8 Tfp pilus assembly protein, ATPase PilM n=10 Tax... 164 3e-39 UniRef50_B9ZRR4 Type IV pilus assembly protein PilM n=1 Tax=Thio... 164 4e-39 UniRef50_Q1IRM9 Type IV pilus assembly protein PilM n=1 Tax=Cand... 164 4e-39 UniRef50_Q6AS38 Related to fimbrial assembly protein PilM n=1 Ta... 164 4e-39 UniRef50_A9GGQ6 Tfp pilus assembly protein, ATPase PilM n=1 Tax=... 163 5e-39 UniRef50_Q0EXA2 Type IV pilus biogenesis protein PilM n=1 Tax=Ma... 163 6e-39 UniRef50_A6T3G1 PilM type IV pilus assembly protein n=24 Tax=cel... 159 6e-38 UniRef50_Q1Q8Q3 Type IV pilus assembly protein PilM n=3 Tax=Mora... 158 1e-37 UniRef50_Q1NMN0 Type IV pilus assembly protein PilM n=2 Tax=Delt... 158 2e-37 UniRef50_A0LFN4 Type IV pilus assembly protein PilM n=1 Tax=Synt... 158 2e-37 UniRef50_Q31KD6 Type IV pilus assembly protein PilM n=2 Tax=Syne... 157 3e-37 UniRef50_B7VLK2 Tfp pilus assembly protein, ATPase PilM n=32 Tax... 157 4e-37 UniRef50_A1SRB1 Type IV pilus assembly protein PilM n=2 Tax=Psyc... 157 4e-37 UniRef50_C9NLF2 Type IV pilus biogenesis protein PilM n=1 Tax=Vi... 157 4e-37 UniRef50_A6GHB3 Type IV pilus biogenesis protein PilM n=1 Tax=Pl... 157 4e-37 UniRef50_D0M6E3 Type IV pilus biogenesis protein PilM n=20 Tax=V... 155 1e-36 UniRef50_B7J635 Type IV pilus assembly protein PilM n=2 Tax=Acid... 155 1e-36 UniRef50_B8D2D5 Tfp pilus assembly protein, ATPase PilM n=1 Tax=... 155 2e-36 UniRef50_A6FBL4 Type IV pilus biogenesis protein PilM n=1 Tax=Mo... 153 6e-36 UniRef50_Q1D0B0 Type IV pilus biogenesis protein PilM n=7 Tax=My... 152 2e-35 UniRef50_A0KN34 Type IV pilus biogenesis protein PilM n=3 Tax=Ae... 150 3e-35 UniRef50_B0JRP3 Type IV pilus assembly protein n=26 Tax=Cyanobac... 149 9e-35 UniRef50_D0Z1J0 Type IV pilus biogenesis protein PilM n=5 Tax=Ph... 146 6e-34 UniRef50_Q5E2F4 Pili assembly protein PilM n=4 Tax=Gammaproteoba... 144 3e-33 UniRef50_B1I3G2 Type IV pilus assembly protein PilM n=1 Tax=Cand... 143 4e-33 UniRef50_A4J3B9 Type IV pilus assembly protein PilM n=1 Tax=Desu... 143 4e-33 UniRef50_Q0AZI1 Tfp pilus assembly protein ATPase PilM-like prot... 143 7e-33 UniRef50_C0GE60 Type IV pilus assembly protein PilM n=1 Tax=Deth... 142 8e-33 UniRef50_A0LUH5 Type IV pilus assembly protein PilM n=2 Tax=Acti... 138 2e-31 UniRef50_Q1QZY8 Type IV pilus assembly protein PilM n=1 Tax=Chro... 137 5e-31 UniRef50_Q1IXL4 Type IV pilus assembly protein PilM n=5 Tax=Dein... 136 7e-31 UniRef50_Q7NHV1 Glr2434 protein n=1 Tax=Gloeobacter violaceus Re... 135 1e-30 UniRef50_Q72IW8 Pilus-associated protein pilM n=6 Tax=cellular o... 134 2e-30 UniRef50_A5D357 Tfp pilus assembly protein, ATPase PilM n=1 Tax=... 134 3e-30 UniRef50_B4F032 Putative uncharacterized protein n=4 Tax=Proteus... 134 3e-30 UniRef50_B7GH54 Tfp pilus assembly protein, ATPase PilM n=8 Tax=... 132 1e-29 UniRef50_Q1IGB2 Putative type IV pili biogenesis protein PilM n=... 132 1e-29 UniRef50_A5WAB6 Tfp pilus assembly protein ATPase PilM-like prot... 131 3e-29 UniRef50_Q1AW01 Type IV pilus assembly protein PilM n=1 Tax=Rubr... 130 3e-29 UniRef50_A1SFR2 Type IV pilus assembly protein PilM n=1 Tax=Noca... 130 3e-29 UniRef50_C0DV42 Putative uncharacterized protein n=1 Tax=Eikenel... 127 3e-28 UniRef50_A6D0C0 Fimbrial assembly protein PilM, putative n=1 Tax... 127 5e-28 UniRef50_C6CY61 Fimbrial assembly family protein n=1 Tax=Paeniba... 127 6e-28 UniRef50_A5KSX7 Type IV pilus assembly protein PilM n=3 Tax=cand... 122 2e-26 UniRef50_C9R931 Type IV pilus assembly protein PilM n=1 Tax=Ammo... 120 5e-26 UniRef50_A5GWJ6 Putative uncharacterized protein SynRCC307_2352 ... 116 6e-25 UniRef50_C6IYF3 Predicted protein n=1 Tax=Paenibacillus sp. oral... 109 1e-22 UniRef50_B6J4A0 Putative uncharacterized protein n=6 Tax=Coxiell... 107 3e-22 UniRef50_B5WSN7 Putative uncharacterized protein n=10 Tax=Burkho... 106 7e-22 Sequences not found previously or not previously below threshold: UniRef50_Q3A2N0 Tfp pilus assembly protein, ATPase PilM n=4 Tax=... 158 1e-37 UniRef50_D0SXT7 Tfp pilus assembly protein n=4 Tax=Acinetobacter... 156 6e-37 UniRef50_B8FH96 Type IV pilus assembly protein PilM n=1 Tax=Desu... 153 4e-36 UniRef50_C0QLC5 PilM n=1 Tax=Desulfobacterium autotrophicum HRM2... 153 4e-36 UniRef50_Q2LWT8 Pili assembly protein n=1 Tax=Syntrophus aciditr... 152 1e-35 UniRef50_A0L248 Type IV pilus assembly protein PilM n=25 Tax=Alt... 152 2e-35 UniRef50_A8ZSX9 Type IV pilus assembly protein PilM n=1 Tax=Desu... 148 1e-34 UniRef50_Q0AF41 Type IV pilus assembly protein PilM n=14 Tax=Bet... 147 4e-34 UniRef50_B3TAD8 Putative MreB/Mbl protein n=2 Tax=environmental ... 145 1e-33 UniRef50_Q5ZX06 Type IV pilus biogenesis protein PilM n=6 Tax=Le... 143 6e-33 UniRef50_Q2BLX5 Type IV pilus assembly protein PilM n=1 Tax=Nept... 140 4e-32 UniRef50_Q2JP21 Type IV pilus assembly protein PilM n=2 Tax=Syne... 139 7e-32 UniRef50_D0L236 Type IV pilus assembly protein PilM n=1 Tax=Halo... 135 1e-30 UniRef50_Q6MPJ0 Fimbrial assembly membrane protein n=1 Tax=Bdell... 134 3e-30 UniRef50_Q15Y38 Type IV pilus assembly protein PilM n=1 Tax=Pseu... 130 4e-29 UniRef50_C1ABF4 Putative type IV pilus assembly protein PilM n=1... 128 1e-28 UniRef50_B4S0G1 Putative Type IV pilus biogenesis protein PilM n... 128 2e-28 UniRef50_Q48PH6 Type IV pilus biogenesis protein PilM n=9 Tax=Ba... 128 2e-28 UniRef50_C8W5I8 Type IV pilus assembly protein PilM n=1 Tax=Desu... 123 4e-27 UniRef50_Q46WI8 Type IV pilus assembly protein PilM n=12 Tax=cel... 123 5e-27 UniRef50_Q4KJJ4 Type IV pilus biogenesis protein PilM n=1 Tax=Ps... 122 1e-26 UniRef50_A1HQ14 Type IV pilus assembly protein PilM n=1 Tax=Ther... 120 4e-26 UniRef50_UPI0000E0EF0E Type IV pilus assembly protein PilM n=1 T... 117 3e-25 UniRef50_B2A7F8 Type IV pilus assembly protein PilM n=1 Tax=Natr... 115 1e-24 UniRef50_B5YJ54 Putative uncharacterized protein n=1 Tax=Thermod... 114 3e-24 UniRef50_B0TEF6 Type iv pilus assembly protein pilm n=1 Tax=Heli... 114 3e-24 UniRef50_C1SLD1 Type IV pilus assembly protein PilM n=1 Tax=Deni... 113 5e-24 UniRef50_A4AFF7 Pilus-associated protein pilM n=1 Tax=marine act... 112 9e-24 UniRef50_Q2B6I7 Putative uncharacterized protein n=1 Tax=Bacillu... 112 1e-23 UniRef50_C1PAI3 Tfp pilus assembly protein ATPase PilM-like prot... 112 2e-23 UniRef50_B8I5K3 Type IV pilus assembly protein PilM n=2 Tax=Clos... 111 2e-23 UniRef50_C7LNA3 Type IV pilus assembly protein PilM n=1 Tax=Desu... 110 6e-23 UniRef50_A6CN92 Putative uncharacterized protein n=2 Tax=Bacillu... 109 9e-23 UniRef50_A4J3B1 Type IV pilus assembly protein PilM n=1 Tax=Desu... 108 2e-22 UniRef50_UPI0001743B82 type IV pilus assembly protein PilM n=1 T... 108 2e-22 UniRef50_C7R4D8 Type IV pilus assembly protein PilM n=3 Tax=Micr... 107 3e-22 UniRef50_B0VJ47 Putative type IV pilus biogenesis protein PilM n... 106 7e-22 UniRef50_C0GNB8 Type IV pilus assembly protein PilM n=1 Tax=Desu... 106 7e-22 UniRef50_D2MKD1 Type IV pilus assembly protein PilM (Fragment) n... 105 2e-21 UniRef50_A5GFB0 Tfp pilus assembly protein ATPase PilM-like prot... 105 2e-21 UniRef50_D2LRV4 Tfp pilus assembly protein ATPase PilM-like prot... 103 4e-21 UniRef50_A9M1V0 Type IV pilus assembly protein PilM n=27 Tax=Nei... 103 5e-21 UniRef50_A5FPX8 Tfp pilus assembly protein ATPase PilM-like prot... 103 6e-21 UniRef50_B6SE76 PilM n=2 Tax=Kingella RepID=B6SE76_9NEIS 103 7e-21 UniRef50_B9XEZ8 Type IV pilus assembly protein PilM n=1 Tax=bact... 102 1e-20 UniRef50_B5YDZ3 Putative uncharacterized protein n=2 Tax=Dictyog... 100 4e-20 UniRef50_B1I3B3 Type IV pilus assembly protein PilM n=1 Tax=Cand... 100 6e-20 UniRef50_B2T709 Putative uncharacterized protein n=5 Tax=Burkhol... 98 2e-19 UniRef50_UPI00016B26A1 type IV pilus assembly protein PilM n=1 T... 97 6e-19 UniRef50_A3DD62 Type IV pilus assembly protein PilM n=9 Tax=Clos... 97 7e-19 UniRef50_B4D6S1 Type IV pilus assembly protein PilM n=1 Tax=Chth... 95 2e-18 UniRef50_B1XUD2 Fimbrial assembly family protein n=1 Tax=Polynuc... 95 3e-18 UniRef50_C8WIS0 Tfp pilus assembly protein ATPase PilM-like prot... 94 7e-18 UniRef50_A5WCG0 Tfp pilus assembly protein ATPase PilM-like prot... 92 1e-17 UniRef50_C8NAT6 Putative uncharacterized protein n=1 Tax=Cardiob... 92 2e-17 UniRef50_Q0SQR2 Type IV pilus assembly protein PilM n=9 Tax=Clos... 91 3e-17 UniRef50_UPI0001743286 hypothetical protein cdivTM_12464 n=1 Tax... 91 4e-17 UniRef50_A6DSU3 Type IV pilus biogenesis protein PilM n=1 Tax=Le... 90 5e-17 UniRef50_C8X4Z0 Type IV pilus assembly protein PilM n=1 Tax=Desu... 90 7e-17 UniRef50_B2A558 Tfp pilus assembly protein ATPase PilM-like prot... 89 1e-16 UniRef50_A5KTJ9 Cell division protein FtsA n=3 Tax=candidate div... 89 1e-16 UniRef50_C1ZC69 Type IV pilus assembly protein PilM n=1 Tax=Plan... 89 2e-16 UniRef50_UPI0001C4213B Tfp pilus assembly protein, ATPase PilM n... 89 2e-16 UniRef50_Q2RI85 Pilus-associated protein pilM n=1 Tax=Moorella t... 88 4e-16 UniRef50_B0K9B9 Tfp pilus assembly protein ATPase PilM-like prot... 87 4e-16 UniRef50_C4Z597 Type IV pilus assembly protein PilM n=1 Tax=Euba... 87 5e-16 UniRef50_C1ZJR3 Tfp pilus assembly protein, ATPase PilM n=1 Tax=... 87 5e-16 UniRef50_A5D349 Tfp pilus assembly protein, ATPase PilM n=1 Tax=... 87 6e-16 UniRef50_A8PP58 Putative uncharacterized protein n=1 Tax=Rickett... 87 6e-16 UniRef50_A7A8R7 Putative uncharacterized protein n=3 Tax=Bifidob... 87 7e-16 UniRef50_Q3AED9 Type IV pilus assembly protein PilM n=1 Tax=Carb... 87 7e-16 UniRef50_C1I9R2 Type IV pilus assembly protein PilM n=1 Tax=Clos... 87 7e-16 UniRef50_Q1PWM9 Putative uncharacterized protein n=1 Tax=Candida... 86 1e-15 UniRef50_UPI0001BC3080 type IV pilus assembly protein PilM n=1 T... 86 1e-15 UniRef50_A3CR64 Fimbrial assembly protein, putative n=1 Tax=Stre... 85 2e-15 UniRef50_B7ATN9 Putative uncharacterized protein n=1 Tax=Bactero... 85 2e-15 UniRef50_A8MGF3 Type IV pilus assembly protein PilM n=1 Tax=Alka... 85 2e-15 UniRef50_A6M145 Type IV pilus assembly protein PilM n=6 Tax=Clos... 85 3e-15 UniRef50_UPI0001699188 Type IV pilus assembly protein PilM n=1 T... 84 4e-15 UniRef50_C8WRG1 Tfp pilus assembly protein ATPase PilM-like prot... 83 6e-15 UniRef50_C0D961 Putative uncharacterized protein n=1 Tax=Clostri... 83 9e-15 UniRef50_A6FZH9 Fimbrial assembly protein n=1 Tax=Plesiocystis p... 83 1e-14 UniRef50_D2QZ79 Type IV pilus assembly protein PilM n=1 Tax=Pire... 83 1e-14 UniRef50_C6E2S2 Tfp pilus assembly protein ATPase PilM-like prot... 82 1e-14 UniRef50_D2QWD9 Tfp pilus assembly protein ATPase PilM-like prot... 82 2e-14 UniRef50_B1I3E2 Type IV pilus assembly protein PilM n=1 Tax=Cand... 82 2e-14 UniRef50_Q0PQA6 Fimbrial assembly membrane protein type IV pilus... 82 2e-14 UniRef50_A3ZL52 Probable fimbrial assembly protein PilM n=1 Tax=... 82 2e-14 UniRef50_Q1V0H0 Type II Secretion n=4 Tax=root RepID=Q1V0H0_PELUB 82 2e-14 UniRef50_UPI0001746041 type IV pilus assembly protein PilM n=1 T... 82 2e-14 UniRef50_A3ZWV9 Spectrin alpha chain-like protein n=1 Tax=Blasto... 81 4e-14 UniRef50_A7VJ09 Putative uncharacterized protein n=2 Tax=Clostri... 80 5e-14 UniRef50_UPI00016C5933 probable fimbrial assembly protein PilM n... 80 5e-14 UniRef50_A6TTT4 Type IV pilus assembly protein PilM n=1 Tax=Alka... 80 5e-14 UniRef50_A6C2R8 Type IV pilus assembly protein PilM n=1 Tax=Plan... 80 6e-14 UniRef50_A6C8P9 Probable fimbrial assembly protein PilM n=1 Tax=... 80 7e-14 UniRef50_A3ZUU3 Type IV pilus biogenesis protein PilM n=1 Tax=Bl... 78 2e-13 UniRef50_B2UR42 Cell division protein FtsA n=1 Tax=Akkermansia m... 78 3e-13 UniRef50_B8JD40 Fimbrial assembly family protein n=4 Tax=Anaerom... 78 4e-13 UniRef50_C4ZCH3 Type IV pilus assembly protein PilM n=1 Tax=Euba... 78 4e-13 UniRef50_Q061N4 Putative uncharacterized protein n=1 Tax=Synecho... 78 4e-13 UniRef50_B1YJT3 Fimbrial assembly family protein n=1 Tax=Exiguob... 77 4e-13 UniRef50_C0AA00 Fimbrial assembly family protein n=1 Tax=Opituta... 77 4e-13 UniRef50_Q7UV57 Probable fimbrial assembly protein PilM n=1 Tax=... 77 5e-13 UniRef50_A4XIE8 Tfp pilus assembly protein ATPase PilM-like prot... 77 6e-13 UniRef50_A8ZWZ1 Fimbrial assembly family protein n=1 Tax=Desulfo... 77 7e-13 UniRef50_A8VZF1 Cyclic nucleotide-binding n=1 Tax=Bacillus selen... 76 9e-13 UniRef50_B1BAN2 Type IV pilus assembly protein PilM n=2 Tax=Clos... 76 1e-12 UniRef50_C9RKD6 Tfp pilus assembly protein ATPase PilM-like prot... 76 1e-12 UniRef50_D2QZ99 Type IV pilus assembly protein PilM n=1 Tax=Pire... 76 1e-12 UniRef50_C5A9J9 Putative uncharacterized protein n=1 Tax=Burkhol... 76 1e-12 UniRef50_D1B5I8 Tfp pilus assembly protein ATPase PilM-like prot... 75 2e-12 UniRef50_A5EW40 Type IV fimbrial biogenesis protein PilM n=1 Tax... 75 2e-12 UniRef50_D1N631 Type IV pilus assembly protein PilM n=1 Tax=Vict... 75 2e-12 UniRef50_Q7UG76 Similar to spectrin alpha chain n=1 Tax=Rhodopir... 73 8e-12 UniRef50_B3E8R7 Tfp pilus assembly protein ATPase PilM-like prot... 72 1e-11 UniRef50_Q6MMP1 Putative type 4 fimbrial biogenesis protein PilM... 72 2e-11 UniRef50_A1ARQ4 Putative type IV pilus assembly protein PilM n=1... 72 2e-11 UniRef50_UPI0001C36943 type IV pilus assembly protein PilM n=1 T... 71 4e-11 UniRef50_Q3A898 Putative uncharacterized protein n=1 Tax=Pelobac... 70 7e-11 UniRef50_C1TME3 Putative uncharacterized protein n=1 Tax=Dethios... 70 1e-10 UniRef50_Q1Q6D7 Putative uncharacterized protein n=1 Tax=Candida... 69 2e-10 UniRef50_Q2SU67 Putative uncharacterized protein n=37 Tax=pseudo... 69 2e-10 UniRef50_A9GDP5 Putative general secretion pathway protein L n=1... 68 2e-10 UniRef50_D0I3T9 Type IV pilus biogenesis protein PilM n=1 Tax=Gr... 68 2e-10 UniRef50_C0QK71 GspL n=1 Tax=Desulfobacterium autotrophicum HRM2... 68 2e-10 UniRef50_Q3A3Y1 Putative uncharacterized protein n=1 Tax=Pelobac... 67 4e-10 UniRef50_Q2LVK0 General secretory pathway protein L n=1 Tax=Synt... 67 5e-10 UniRef50_C8W184 Tfp pilus assembly protein ATPase PilM-like prot... 67 8e-10 UniRef50_Q01NT7 Fimbrial assembly family protein n=1 Tax=Candida... 66 1e-09 UniRef50_B9M0Z1 Tfp pilus assembly protein ATPase PilM-like prot... 65 2e-09 UniRef50_D1Y3M7 Putative uncharacterized protein n=1 Tax=Pyramid... 65 3e-09 UniRef50_C0QLU1 Putative general secretion pathway protein L n=1... 64 4e-09 UniRef50_Q1D9F0 Putative general secretion pathway protein L n=2... 64 5e-09 UniRef50_A5GC15 General secretion pathway protein L n=5 Tax=Geob... 64 5e-09 UniRef50_C0QUJ1 Putative uncharacterized protein n=1 Tax=Perseph... 63 6e-09 UniRef50_B9Y7Z5 Putative uncharacterized protein n=1 Tax=Holdema... 63 7e-09 UniRef50_C4L4L8 Fimbrial assembly family protein n=1 Tax=Exiguob... 63 8e-09 UniRef50_Q24UU7 Putative uncharacterized protein n=1 Tax=Desulfi... 63 9e-09 UniRef50_B0MQV2 Putative uncharacterized protein n=1 Tax=Eubacte... 63 1e-08 UniRef50_B8HI66 Tfp pilus assembly protein ATPase PilM-like prot... 63 1e-08 UniRef50_Q3A7K3 MshA biogenesis protein MshI-1 n=1 Tax=Pelobacte... 62 1e-08 UniRef50_C6VT50 Cell division protein FtsA n=1 Tax=Dyadobacter f... 62 2e-08 UniRef50_Q2BKX0 Tfp pilus assembly protein ATPase PilM-like n=1 ... 62 2e-08 UniRef50_Q6M9N6 Putative uncharacterized protein n=1 Tax=Candida... 62 2e-08 UniRef50_C8X4Q2 Tfp pilus assembly protein ATPase PilM-like prot... 62 2e-08 UniRef50_B2V6U3 Tfp pilus assembly protein ATPase PilM-like prot... 62 3e-08 UniRef50_D2L7F4 Tfp pilus assembly protein ATPase PilM-like prot... 60 5e-08 UniRef50_B8FD58 Putative uncharacterized protein n=1 Tax=Desulfa... 60 6e-08 UniRef50_Q02D04 Putative uncharacterized protein n=1 Tax=Candida... 60 7e-08 UniRef50_B8FQA6 Tfp pilus assembly protein ATPase PilM-like prot... 60 9e-08 UniRef50_D0RPC5 Fimbrial assembly protein n=1 Tax=alpha proteoba... 60 9e-08 UniRef50_B8FQ80 Fimbrial assembly family protein n=2 Tax=Desulfi... 59 2e-07 UniRef50_Q3JD25 General secretion pathway protein L n=2 Tax=Nitr... 59 2e-07 UniRef50_Q1IRC1 Putative uncharacterized protein n=1 Tax=Candida... 58 2e-07 UniRef50_C1F522 Putative uncharacterized protein n=1 Tax=Acidoba... 58 2e-07 UniRef50_B4D1D7 Tfp pilus assembly protein ATPase PilM-like prot... 58 2e-07 UniRef50_P31768 Competence protein A n=18 Tax=Haemophilus influe... 58 3e-07 UniRef50_D1R6G2 Putative uncharacterized protein n=1 Tax=Parachl... 58 4e-07 UniRef50_B0MCL1 Putative uncharacterized protein n=1 Tax=Anaeros... 57 5e-07 UniRef50_B5YEE0 Fimbrial assembly protein (PilN) n=2 Tax=Dictyog... 57 5e-07 UniRef50_A6VM68 Competence protein A n=1 Tax=Actinobacillus succ... 57 5e-07 UniRef50_C9A711 Predicted protein n=1 Tax=Enterococcus casselifl... 57 9e-07 UniRef50_Q1NII5 Tfp pilus assembly protein ATPase PilM-like n=3 ... 56 1e-06 UniRef50_A3YUA4 Putative uncharacterized protein n=1 Tax=Synecho... 56 1e-06 UniRef50_B9XBV3 Type IV pilus assembly protein PilM n=1 Tax=bact... 55 2e-06 UniRef50_A6FG30 Hypothetical biogenesis protein MshI n=1 Tax=Mor... 55 2e-06 UniRef50_Q2S971 Putative uncharacterized protein n=1 Tax=Hahella... 55 2e-06 UniRef50_C0GW01 Fimbrial assembly family protein n=1 Tax=Desulfo... 55 3e-06 UniRef50_B5JF45 Putative uncharacterized protein n=1 Tax=Verruco... 54 5e-06 UniRef50_B1ZX78 Fimbrial assembly family protein n=1 Tax=Opitutu... 54 5e-06 UniRef50_Q04SY3 Actin-like ATPase n=4 Tax=Leptospira RepID=Q04SY... 54 6e-06 UniRef50_Q9CLJ9 ComA n=1 Tax=Pasteurella multocida RepID=Q9CLJ9_... 53 6e-06 UniRef50_A1WZA6 Putative uncharacterized protein n=1 Tax=Halorho... 53 8e-06 UniRef50_C6P871 Tfp pilus assembly protein ATPase PilM-like prot... 53 8e-06 UniRef50_A9BA90 Tfp pilus assembly protein, ATPase PilM n=1 Tax=... 53 8e-06 UniRef50_B3PKD3 Putative MSHA biogenesis protein MshI n=1 Tax=Ce... 53 9e-06 UniRef50_B2GB80 Cell division protein FtsA n=20 Tax=Lactobacillu... 53 1e-05 UniRef50_UPI00016C4016 hypothetical protein GobsU_21055 n=1 Tax=... 53 1e-05 UniRef50_C8NFI0 Cell division protein FtsA n=7 Tax=Firmicutes Re... 53 1e-05 UniRef50_A8VWS1 Cell division protein FtsA n=3 Tax=Bacillus RepI... 52 2e-05 UniRef50_O07672 Cell division protein ftsA n=87 Tax=Lactobacilla... 52 2e-05 UniRef50_B8FE40 Fimbrial assembly family protein n=1 Tax=Desulfa... 52 2e-05 UniRef50_O07111 Cell division protein ftsA n=22 Tax=Enterococcus... 52 3e-05 >UniRef50_P45753 Uncharacterized protein yrfD n=83 Tax=Enterobacteriaceae RepID=YRFD_ECOLI Length = 259 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 259/259 (100%), Positives = 259/259 (100%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL Sbjct: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 Query: 61 PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD 120 PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD Sbjct: 61 PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD 120 Query: 121 YSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLAW 180 YSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLAW Sbjct: 121 YSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLAW 180 Query: 181 RDNEQWLWATRYSWGRKLAVGMTSAKELAAALSVDPESVAICGEGGFDPWEAVSVRQPPL 240 RDNEQWLWATRYSWGRKLAVGMTSAKELAAALSVDPESVAICGEGGFDPWEAVSVRQPPL Sbjct: 181 RDNEQWLWATRYSWGRKLAVGMTSAKELAAALSVDPESVAICGEGGFDPWEAVSVRQPPL 240 Query: 241 PPPGGDFAIALGLALGKAY 259 PPPGGDFAIALGLALGKAY Sbjct: 241 PPPGGDFAIALGLALGKAY 259 >UniRef50_B5XTU1 HofM protein n=5 Tax=Klebsiella RepID=B5XTU1_KLEP3 Length = 266 Score = 242 bits (619), Expect = 6e-63, Method: Composition-based stats. Identities = 113/261 (43%), Positives = 150/261 (57%), Gaps = 2/261 (0%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 MAF+ W+IG+H+QQ VA++ L+RWWR+PL +++ G +VD L L Sbjct: 1 MAFRNWRIGMHIQQDSIAIVALLHERSHWALRRWWRIPLPPGLVRQGMVVDVSALGAQLS 60 Query: 61 PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD 120 W RELP +H + +AFPA RTLQ+ P P +L +REQ W++ M ++L M SL D Sbjct: 61 AWRRELPVQHQVSIAFPAVRTLQKRLPYPQFALRDREQATWIASAMTQQLAMPAASLSID 120 Query: 121 YSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLAW 180 Y+ S + VTAAQ ++ L LA RLR+ V+AI PDASAL F+P L Q LAW Sbjct: 121 YAPTSRDDGWQVTAAQRLDINVLRALAGRLRLRVAAIVPDASALGAFVPLLNPQSQGLAW 180 Query: 181 RDNEQWLWATRYSWGRKLAVGMTSAKELAAALSVDPESVAICG--EGGFDPWEAVSVRQP 238 RD WLWAT+ +WG + S +LA L V A G D W+ + RQP Sbjct: 181 RDENHWLWATQEAWGCVTCDEVKSLSQLAEQLQVPLRLCADAGDEARNLDVWQVIHRRQP 240 Query: 239 PLPPPGGDFAIALGLALGKAY 259 PLP G +AIALGLALG + Sbjct: 241 PLPVDGDRYAIALGLALGSEH 261 >UniRef50_Q7NA51 Similar to unknown protein YrfD of Escherichia coli n=2 Tax=Photorhabdus RepID=Q7NA51_PHOLL Length = 276 Score = 242 bits (618), Expect = 8e-63, Method: Composition-based stats. Identities = 67/275 (24%), Positives = 114/275 (41%), Gaps = 22/275 (8%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 M W +GL +Q AVA ++ L+ W+ L + ++ +GR+ + L L Sbjct: 1 MYSPKWYVGLDIQNGILRAVAAIKRRDGWQLRHCWQYLLSDAVMPEGRLQRPEILCDILN 60 Query: 61 PWSRELPQRHHIMLAFPASRTLQRSFPR-PSMSLGEREQTAWLSGTMARELDMDPDSLRF 119 W +ELP++ LA P +TLQ+S P ++L E EQ +++ + ++ + L Sbjct: 61 QWRQELPKKISFRLALPVQQTLQKSLILPPDINLKEPEQGWFINASAEKQFPFNTRELAL 120 Query: 120 DYSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFL--PSHQQC 177 DY + ++AA+ K+L L + + AI AL+ + P+ Sbjct: 121 DYRIIEQNA--YISAARQKDLNLWLQCLAQAGIFPDAIDIAPCALRYIAQYAGVPADSWL 178 Query: 178 LAWRDNEQWLWAT----RYSWGRKLAVGMTSAKELAAALSVDP------------ESVAI 221 L R WLW + +++ A S +++ LS + Sbjct: 179 L-HRQQSGWLWVSPANAPFAYDLVSANTAVSPQQIIRQLSASSMAEQPVYYSSYQQEALP 237 Query: 222 CGEGGFDPWEAVSVRQPPLPPPGGDFAIALGLALG 256 G +D A QPPLP ++ IA GLAL Sbjct: 238 EGTYSWDMLTAFRHYQPPLPIQLMEYVIAGGLALR 272 >UniRef50_A4WFI3 Putative uncharacterized protein n=2 Tax=Enterobacter RepID=A4WFI3_ENT38 Length = 260 Score = 236 bits (603), Expect = 5e-61, Method: Composition-based stats. Identities = 123/256 (48%), Positives = 173/256 (67%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 MAFK W+ G+H+QQ +AV + + L+RWW++PL II+DG+I++ +QL L Sbjct: 1 MAFKTWRTGVHIQQDRVLAVCLTKERTGWNLRRWWQIPLHPGIIRDGQIIEPEQLVAALR 60 Query: 61 PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD 120 WS+ LPQ H I LAFPA+RTLQ++ P P+++L E EQ +W++ M+REL+M PD+L FD Sbjct: 61 AWSKVLPQHHRIFLAFPAARTLQKALPCPALNLRESEQASWIASAMSRELEMAPDALCFD 120 Query: 121 YSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLAW 180 Y +D+L+ +++VTAAQ+KE+A LLTLA+ LR+HV+AITPDA AL L L C W Sbjct: 121 YVQDTLTRSFHVTAAQNKEVAALLTLAKTLRLHVAAITPDAGALVNLLLLLAPPAHCAVW 180 Query: 181 RDNEQWLWATRYSWGRKLAVGMTSAKELAAALSVDPESVAICGEGGFDPWEAVSVRQPPL 240 RD+ WLWATR+ WGRK + +L+A L++ PE +A+ DP+ VS P L Sbjct: 181 RDDHHWLWATRHQWGRKPLTEAGTVADLSAILALKPEDMALFAADNLDPFTLVSRNLPSL 240 Query: 241 PPPGGDFAIALGLALG 256 P G DF +AL LA+G Sbjct: 241 PDSGADFTVALALAMG 256 >UniRef50_Q1CCN3 Type IV pilus biogenesis protein PilM n=35 Tax=Enterobacteriaceae RepID=Q1CCN3_YERPN Length = 298 Score = 231 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 65/289 (22%), Positives = 112/289 (38%), Gaps = 32/289 (11%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 M + WQ+GL +Q + A+A++R L+ WW L + ++++G + L++ L Sbjct: 1 MYSQYWQVGLDIQMEAIRALAVIRRRNGWQLRYWWHKILPSGVLREGILHQPDILSEQLK 60 Query: 61 PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD 120 ++LP+ + +A PA R LQ + P L E E+ ++ + +R ++ +L D Sbjct: 61 LLRKQLPRHISLRIALPAQRILQHTIHVPDRRLREPERDGFIKASASRLFPVNSQALALD 120 Query: 121 Y-SEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPF--LPSHQQC 177 Y E S +TAA+ E+ E+ + I AL+ L Sbjct: 121 YCRETVASSELLITAARQSEVQQWQACLEQAGLSSQVIDIAPCALRYMATATGLSGPYW- 179 Query: 178 LAWRDNEQWLWAT----RYSWGRK--------LAVGMTSAKELAAALSVDP--------- 216 L R +WLW + + G + L A L++ Sbjct: 180 LVHRLANEWLWVSSSDMPFHSGVVAIETECRTQENDIRLLSALLAQLNMRGAGEDGAPLP 239 Query: 217 -------ESVAICGEGGFDPWEAVSVRQPPLPPPGGDFAIALGLALGKA 258 + + P A + QPPLP F +A GLA+ A Sbjct: 240 VYYSSVVKESLPENTRSWSPLTAFAHYQPPLPALPAAFTLAGGLAVRAA 288 >UniRef50_C6CH35 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=C6CH35_DICZE Length = 292 Score = 226 bits (577), Expect = 4e-58, Method: Composition-based stats. Identities = 77/290 (26%), Positives = 120/290 (41%), Gaps = 34/290 (11%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 MA+ IWQ+GL +Q A+A+ R L+ WW+LPL + ++ G + +L L Sbjct: 1 MAYPIWQVGLDIQNGFIRAMAVQRRRYGWQLRHWWQLPLPDGTLRGGSLHHPTELCTVLR 60 Query: 61 PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD 120 W +ELP+ + L FPA R LQ+ P L E ++ ++ + L + D L D Sbjct: 61 QWRQELPRFVSLRLGFPAPRVLQQRLAMPDRRLREPQRGDYIRKMAVKALPVSGDDLALD 120 Query: 121 YSEDSLSPAYNVT-AAQSKELATLLTLAERLRVHVSAITPDASALQR-FLPFLPSHQQCL 178 Y D +P + AA+ EL L + A+ AL+ + + L Sbjct: 121 YRPDPQTPNMLLVTAARQTELDVWLHCLRDAGLQPDAVDITPCALRCMAARAGLADDRLL 180 Query: 179 AWRDNEQWLWATRYSWGRKLAVGMTSAKELAAA---LSVDP---ESVAICGEGG------ 226 R ++ WLW + LA G ++A + V+P + V+ C + Sbjct: 181 LHRFDDHWLWVSPLK--APLAFGTFHPDDMADGATDIQVEPDLIKYVSTCYQKEVPPVAY 238 Query: 227 ------------------FDPWEAVSVRQPPLPPPGGDFAIALGLALGKA 258 + P A S +QPPLP FAIA GLA+ Sbjct: 239 LSASTPAGLQHTSASLAAWSPLTAFSQQQPPLPAFPAAFAIAGGLAIRPE 288 >UniRef50_C6C803 Putative uncharacterized protein n=5 Tax=Enterobacteriaceae RepID=C6C803_DICDC Length = 283 Score = 226 bits (577), Expect = 5e-58, Method: Composition-based stats. Identities = 82/283 (28%), Positives = 121/283 (42%), Gaps = 27/283 (9%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 MA+ +WQIG+ +Q A+A+ R L++WW+LPL D ++ G + + L L Sbjct: 1 MAYPVWQIGMDVQNGVLRALAVQRRRHGWQLRQWWQLPLPGDTLRGGSLHNPAALCAVLQ 60 Query: 61 PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD 120 W RELP + LAFPA R LQ+ P L E E+ ++ A++L + D+L FD Sbjct: 61 RWKRELPHYVSLRLAFPADRVLQQRLSEPDGRLREPERGWYIEKMAAKKLPVSSDALIFD 120 Query: 121 YSEDSL-SPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFL-PFLPSHQQCL 178 Y D + + VTAA+ ELA L + + A+ AL+ + L Sbjct: 121 YRIDPAVADSVLVTAARKAELALWLDCFRHAGLQLDAVDITPCALRCMAHQAGLASDNML 180 Query: 179 AWRDNEQWLWATRYSWGRKLAVGMTSAKELAAALS----VDPESVAICGEGG-------- 226 R ++WLW + S LA G + A + V + E Sbjct: 181 VHRFEDRWLWIS--SLNAPLAFGTVHVDDAADFSALLSYVSAHYEPMASEPIYLSTSAPD 238 Query: 227 -----------FDPWEAVSVRQPPLPPPGGDFAIALGLALGKA 258 + P A S +QPPLP F IA GLA+ Sbjct: 239 FLPEASSSFTLWSPLPAFSQQQPPLPAFPSAFVIAGGLAIRPE 281 >UniRef50_B2Q5V1 Putative uncharacterized protein n=4 Tax=Providencia RepID=B2Q5V1_PROST Length = 286 Score = 222 bits (567), Expect = 6e-57, Method: Composition-based stats. Identities = 62/274 (22%), Positives = 106/274 (38%), Gaps = 21/274 (7%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 M + W IG+ L Q VA + K +L W+ + N+I + L K L+ Sbjct: 7 MYSQKWNIGIDLCQASIQLVATKQNRKRRYLCECWQHNIPNEITSQSEHDRYEMLLKILI 66 Query: 61 PWSRELPQRHHIMLAFPASRTLQRSFPRPS-MSLGEREQTAWLSGTMARELDMDPDSLRF 119 W R+LP+ + +AF A RTL++ P ++L + E +L + + + L Sbjct: 67 QWRRKLPKNCQVSMAFSALRTLKQQVTLPEQVTLKQPELGWYLQSCAEKLFPLSSEDLVI 126 Query: 120 DYSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPF--LPSHQQC 177 DY + + E+ L ++AI L+ + LP Sbjct: 127 DYRVIDNRA--YLNGVRKSEIVFWQNLLHDSGFLLTAIDVAPCVLRYIARYAGLPDESWL 184 Query: 178 LAWRDNEQWLWATRYS----WGRKLAVGMTSAKELAAALSVD--PESVAICGEG------ 225 + +R E WLW S + + +T+ ++ A L+ + P + + G Sbjct: 185 IHYRQGE-WLWTGPVSQPATYNQIQENDITTLPQIIALLNENNGPLKLPLYYIGDHHKSQ 243 Query: 226 ---GFDPWEAVSVRQPPLPPPGGDFAIALGLALG 256 + +A LP GDF +A GLAL Sbjct: 244 AVHSWSLLQAFHNHTVRLPHQLGDFVVATGLALR 277 >UniRef50_C9Y279 Uncharacterized protein yrfD n=2 Tax=Cronobacter RepID=C9Y279_CROTZ Length = 260 Score = 221 bits (562), Expect = 2e-56, Method: Composition-based stats. Identities = 108/265 (40%), Positives = 141/265 (53%), Gaps = 12/265 (4%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 M WQIGLH+Q ++VA+ QRWW LPL + Q L + L Sbjct: 1 MIGAQWQIGLHIQPDIVISVALTPKRGGWRQQRWWALPLAPYHDDE---QRRQALIEALT 57 Query: 61 PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD 120 PW +LP+ I L FPA RTLQR PRP +L E E AWL AR+L + PD+L FD Sbjct: 58 PWRAQLPRYSSIRLGFPAQRTLQRELPRPVTALCEPECEAWLGAVAARQLSLPPDALAFD 117 Query: 121 YSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLAW 180 Y+E Y VTAA++ E+A L A LR +A+TPDASAL F P++ + + + Sbjct: 118 YTESQE--GYAVTAARAVEVAELTACARALRFTPAALTPDASALACFFPYVDNTCKVIVA 175 Query: 181 RDNEQWLWATRYSWGRKLAVGMTSAKELAAALSVDPESVAICGE-------GGFDPWEAV 233 + QWLWATR WG G L L+V + + +CG FDPW+A+ Sbjct: 176 QAGAQWLWATRDRWGVCATPGAEGLLSLGVQLNVPAQEITLCGAIREEGDWQRFDPWQAI 235 Query: 234 SVRQPPLPPPGGDFAIALGLALGKA 258 + PPLP G FA+A+GLALG A Sbjct: 236 TWPCPPLPDERGRFAVAIGLALGAA 260 >UniRef50_D2U382 Putative uncharacterized protein n=1 Tax=Arsenophonus nasoniae RepID=D2U382_9ENTR Length = 291 Score = 218 bits (556), Expect = 1e-55, Method: Composition-based stats. Identities = 54/276 (19%), Positives = 94/276 (34%), Gaps = 23/276 (8%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVD--AQQLAKT 58 M + WQIGL + + VA + L+ W+ L +D + L Sbjct: 15 MFLQKWQIGLDIHHNKIQLVAATQHRHGWQLRECWQHSLPITKTQDTETQNIRITTLKNI 74 Query: 59 LLPWSRELPQRHHIMLAFPASRTLQRSFPRP-SMSLGEREQTAWLSGTMARELDMDPDSL 117 L W ++LP + + L+ F P ++L E E + MD L Sbjct: 75 LQQWHKKLPNNCDARFSLSTLQILKSHFLLPEKITLTEPELGWLVHSKAETLFPMDIREL 134 Query: 118 RFDYSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLP--FLPSHQ 175 DY + A + ++ L + +S I +AL+ +P + Sbjct: 135 ILDYRI--YQKQIYLCATRRSDIVFWSELLHEVGFSLSVIDISPNALRYLAHKASIPDNT 192 Query: 176 QCLAWRDNEQWLWATR----YSWGRKLAVGMTSAKELAAALSVDPESVA--ICGEGG--- 226 L +R ++W+ A + + S ++L L + + I G Sbjct: 193 W-LIYRRQQEWICAGPLYQSIHYQPLEITEVDSIEKLVLLLPKETQQQPNTIYYLGNDIK 251 Query: 227 ------FDPWEAVSVRQPPLPPPGGDFAIALGLALG 256 + ++ LP +FAIA GLAL Sbjct: 252 HHHFSTWSLLDSFQYYSIKLPKDFHNFAIAAGLALR 287 >UniRef50_D0FX05 Conserved uncharacterized protein n=4 Tax=Enterobacteriaceae RepID=D0FX05_ERWPY Length = 275 Score = 218 bits (556), Expect = 1e-55, Method: Composition-based stats. Identities = 69/273 (25%), Positives = 111/273 (40%), Gaps = 15/273 (5%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 MAF+ WQ+GL +Q + A+ I R L+ WW+ L D +++G + L L Sbjct: 1 MAFETWQVGLDIQNGQLCALGIQRRRNGWQLRHWWQHALPQDTLRNGLVQRPDALVPLLK 60 Query: 61 PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD 120 W ++LP R + + FP +QR RP+ +L E +++ ++ R M P+ L D Sbjct: 61 LWRKQLPSRISLRVGFPPQLVMQRQLARPTAALREPDRSHYIIAAARRFFPMAPEELALD 120 Query: 121 YSEDSL-SPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLP-SHQQCL 178 Y + + +TAA+ + L + L +++ + + +AL L L Sbjct: 121 YRTGGDANGSLYLTAARQEALQSWLGCLQQVSLTPDVLELTPAALFALARSLGVDASAAL 180 Query: 179 AWRDNEQWLWATR----YSWGRKLAVGMTSAKELAAALSVDPE---------SVAICGEG 225 R ++ WLW WG +L + G Sbjct: 181 VHRLSDHWLWYAPQQHDRPWGWCPYAEAEDFHQLRQRFLGNSSTIWYSSALTEALPAGAS 240 Query: 226 GFDPWEAVSVRQPPLPPPGGDFAIALGLALGKA 258 P A+ QPPLP G FA+A GLAL Sbjct: 241 ALSPLAALRCYQPPLPAYDGAFALATGLALRPE 273 >UniRef50_C5BGR0 Putative uncharacterized protein n=2 Tax=Edwardsiella RepID=C5BGR0_EDWI9 Length = 276 Score = 189 bits (480), Expect = 8e-47, Method: Composition-based stats. Identities = 69/272 (25%), Positives = 106/272 (38%), Gaps = 22/272 (8%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 M W++G+ +Q + VAVA+ L+ WWRLPL D +DG + L TL Sbjct: 1 MGGGHWRLGIDIQPAQLVAVALSARRDGIQLRGWWRLPLTADPDRDGL---SPSLPATLT 57 Query: 61 PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD 120 LP+R + AFPA R ++ P ++ L ++ L R+L + L D Sbjct: 58 TLRARLPRRLSVRAAFPAERAIRDMLPGSTLPLTPWQRHRLLLAQGERQLMLPAHQLACD 117 Query: 121 YSEDSLSPA-YNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFL-PSHQQCL 178 ++ + V A + L + + + +T AL+R S L Sbjct: 118 FAPAPEGGGRWQVCAVHRAQRDRWCALFDSAGLPLQRLTLAPCALRRLARLAGESPAAPL 177 Query: 179 AWRDNEQWLWATRYSWGRKLAVGMTSAKE---------LAAALSVDPESVAI------CG 223 + D ++ W WG L G S + +AA + VA G Sbjct: 178 IYGDGYRFCWIAP--WGSPLQYGFVSLSDGPEAACAQAVAALPPGVADGVAPLHCGSDSG 235 Query: 224 EGGFDPWEAVSVRQPPLPPPGGDFAIALGLAL 255 G+ AV PLP F +ALGLA+ Sbjct: 236 HRGWSGLRAVRHLVSPLPADPAAFCLALGLAV 267 >UniRef50_UPI0001C16347 Type IV pilus assembly protein PilM n=2 Tax=Nostocaceae RepID=UPI0001C16347 Length = 360 Score = 176 bits (447), Expect = 6e-43, Method: Composition-based stats. Identities = 36/247 (14%), Positives = 75/247 (30%), Gaps = 27/247 (10%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLP-WSREL 66 +G+ L + R + ++ P+ II +G I D ++ + + Sbjct: 25 VGVELTGDRINIAQLHRVRQGLRIESLSTFPVPEGIIVNGEICDCPRMGEIISQAIVESK 84 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDS- 125 + I P + R P P G+ ++++ L + D + Sbjct: 85 IKTTQIRTCIPEKHAIVRIIPAPLELEGQELYDSFINQEAGLYLPYPREEADIDCQKLGY 144 Query: 126 -------LSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCL 178 + A + + + + + + + + A+ R + +Q L Sbjct: 145 FIDQDGIEKAQILLVATRREITDSYIHTFALAGLKIEVLEIKSFAIIRTI-----QKQLL 199 Query: 179 AWRDNEQWLWATRYSWGRKLAVGMTSAKELAAALSVDPESVAICGEGGFDPWEAVSV--- 235 R E L E+A ++ P+ G G F A+S Sbjct: 200 ILRPEE----------AVVLVNIEFDHTEVAVIINGVPQFSRTIGIGTFQLETAISTPIS 249 Query: 236 RQPPLPP 242 R+ LP Sbjct: 250 REISLPV 256 >UniRef50_Q3JEG9 Type IV pilus assembly protein PilM n=57 Tax=Gammaproteobacteria RepID=Q3JEG9_NITOC Length = 372 Score = 174 bits (441), Expect = 3e-42, Method: Composition-based stats. Identities = 21/174 (12%), Positives = 64/174 (36%), Gaps = 8/174 (4%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLP-WSREL 66 +G+ + + + R + ++ + L + + +I + + L +T+ R Sbjct: 31 LGIDISSSAIKLLELSRKGERICVENYAIEALPPHTVVENKIENVEALGETIKRAVKRSG 90 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDS- 125 + + A S + ++ P+ L RE + + + + + + D++ Sbjct: 91 TRTKKVAAAVTGSAVITKTISVPNA-LSNRELESHIELEAGQYIPYPLEEVNLDFAVLGP 149 Query: 126 -----LSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSH 174 + A +S+ + + + E + + I +A A+++ P + Sbjct: 150 SEKDSERVDVLLAACRSENIESRVASLELAGLTPAVIDVEAYAMEKVFPLIAGQ 203 >UniRef50_B3E9T0 Type IV pilus assembly protein PilM n=8 Tax=Deltaproteobacteria RepID=B3E9T0_GEOLS Length = 352 Score = 174 bits (440), Expect = 3e-42, Method: Composition-based stats. Identities = 21/170 (12%), Positives = 54/170 (31%), Gaps = 9/170 (5%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSREL- 66 +G+ + V + + L +PL + I D ++D + + L Sbjct: 12 VGIDIGSSSVKLVQLWQTRDGYQLLNAAIMPLPPEAIVDNSLMDTAAVVDAVKNLVASLG 71 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL 126 + + + + + R P M+ E +S + + D + D+ Sbjct: 72 IKSKDVACSISGNAVIIRKIILPVMTS--EELEDQISWEAEQYIPFDIKDVHIDFQILGQ 129 Query: 127 SP------AYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPF 170 + A++ + + L + ++ + D+ A+Q Sbjct: 130 DSIDPSKIQVLLVASKKDIINDYVALFNDAGLSLNVMDVDSFAVQNAFEL 179 >UniRef50_Q60BY8 Type 4 fimbrial biogenesis protein PilM n=10 Tax=Bacteria RepID=Q60BY8_METCA Length = 380 Score = 169 bits (427), Expect = 1e-40, Method: Composition-based stats. Identities = 21/179 (11%), Positives = 65/179 (36%), Gaps = 8/179 (4%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPW-SREL 66 +G+ + + + R ++ + +PL + + D + + ++ + + Sbjct: 39 LGIDISAAAVKLLELSRKNGGYQVESYGVVPLPRNTVVDNTLAEPDNVSAAVRAVVKQSG 98 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL 126 H ++A P S + + P+ +L E A + + + + + D+ Sbjct: 99 TALRHAVVAVPGSVVITKRIALPA-NLEGDELEAQIELEADQYIPHAREEVSLDFEVLGK 157 Query: 127 SP------AYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLA 179 +P + A + + + +++ E + V + ++ A++R + L Sbjct: 158 NPKNPDLLDVLLVATRRENVEDRVSVLENAGLGVEIVDVESYAIERAFELVRDQLPPLL 216 >UniRef50_Q7NZT8 Type 4 fimbrial biogenesis protein PilM n=2 Tax=Chromobacterium group RepID=Q7NZT8_CHRVO Length = 370 Score = 164 bits (415), Expect = 3e-39, Method: Composition-based stats. Identities = 27/176 (15%), Positives = 65/176 (36%), Gaps = 9/176 (5%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLP-WSREL 66 +GL + V + R + ++R+ PL D + DG +VD + +A+ L W R Sbjct: 27 LGLDISSTAIKLVELSRNGRNIQVERYVIEPLPKDAVNDGNLVDIEGIAEALRRGWKRLG 86 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL 126 + +A P + + P+ + ++ + + + D + D+ Sbjct: 87 SPIRSVAIAIPTPMAIYKKLLVPASQTEDMDE--LIESEANQIIPFPLDEVNLDHQVLGP 144 Query: 127 SP------AYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQ 176 SP + AA+ +++ + + E + + ++ A+ + Sbjct: 145 SPSSMDDLEVLLCAARKEKVEERVAVVEMAGLRAHVVDVESFAMMTAFEQIQQQLP 200 >UniRef50_B2I0J8 Tfp pilus assembly protein, ATPase PilM n=10 Tax=Gammaproteobacteria RepID=B2I0J8_ACIBC Length = 352 Score = 164 bits (415), Expect = 3e-39, Method: Composition-based stats. Identities = 20/180 (11%), Positives = 65/180 (36%), Gaps = 8/180 (4%) Query: 5 IWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTL-LPWS 63 +G+ + + + + +++ + +PL + + + I++ + +A+ L + Sbjct: 10 KGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMN 69 Query: 64 RELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSE 123 PQ H +A P S + ++ + + E+ + + + D + D+ Sbjct: 70 LANPQTTHAAIAVPTSTVIHKTIEM-DADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEV 128 Query: 124 D------SLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQC 177 + A +++ + T + + E ++ ++ A++R Sbjct: 129 LPDRLTNPNRVNVLLVATRTENVETRVEVLELADLNPKLADVESYAVERAFSVFADSLPM 188 >UniRef50_B9ZRR4 Type IV pilus assembly protein PilM n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZRR4_9GAMM Length = 355 Score = 164 bits (414), Expect = 4e-39, Method: Composition-based stats. Identities = 24/179 (13%), Positives = 65/179 (36%), Gaps = 8/179 (4%) Query: 3 FKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTL-LP 61 K +G+ + + + R K ++ + PL + ++ D D + + L Sbjct: 7 SKQGLLGVDVSSAAVKVLELARQGKGYRVEAFAVEPLPDGVMVDKVCQDTEAVGSALARA 66 Query: 62 WSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDY 121 R + H +A P+S + ++ + L + E + + + + + D+ Sbjct: 67 VKRSGTKLKHCAMAVPSSAVITKTIQMSAT-LSDTELEGQVFVEADQYIPYTLEEVNLDF 125 Query: 122 SEDSLSP------AYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSH 174 + V A++ + + + + +AE ++ + +A A++ L Sbjct: 126 QVLGKNEKNPQLVDVLVVASRRENVDSRVAIAESAKLTPELVDVEAYAIEHASERLVEQ 184 >UniRef50_Q1IRM9 Type IV pilus assembly protein PilM n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IRM9_ACIBL Length = 350 Score = 164 bits (414), Expect = 4e-39, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 59/168 (35%), Gaps = 7/168 (4%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRE-L 66 +GL + AV + + + PL +DI+ D IVD+ +A + E Sbjct: 11 VGLDIGSSSIKAVELKKSRNGVEVAHMAMEPLSSDIVVDSMIVDSGSVASAITKIFTESG 70 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSED-- 124 + + + + + P +MS + E + + A+ + D + DY Sbjct: 71 IKTRAVATSVSGHSVIVKRIPMSTMS--DSELSGIIQTEAAQHIPFDISDVSIDYQILSD 128 Query: 125 --SLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPF 170 + + A + ++ + + + DA ALQ + Sbjct: 129 TGGSTMDVLLVAVKKDKILNYTNVLSLAGKSPAVVDIDAFALQNCYEY 176 >UniRef50_Q6AS38 Related to fimbrial assembly protein PilM n=1 Tax=Desulfotalea psychrophila RepID=Q6AS38_DESPS Length = 354 Score = 164 bits (414), Expect = 4e-39, Method: Composition-based stats. Identities = 18/183 (9%), Positives = 54/183 (29%), Gaps = 9/183 (4%) Query: 5 IWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSR 64 +G+ + + + L L + DG + + + + + + Sbjct: 12 KLVVGIDIGSHSVKICQLKKNGSRYSLLSLGTALLPEGAVDDGILNEPSLVGEIVKNLLQ 71 Query: 65 EL-PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSE 123 L + I + + + +M + + + + D D + D+ + Sbjct: 72 NLRIRNKKIGFSISGYSVIVKKIVLDAM--EDALLEEHILAEAEQYIPFDQDDVYLDFQD 129 Query: 124 D------SLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQC 177 + AA+ + + L + E + + D A + +++ Sbjct: 130 LKTNTDPQDRTDIMLVAAKKEVVQDYLFMFEEQGLTPVLVDVDGFAFENAFEHAHPNEKD 189 Query: 178 LAW 180 +A Sbjct: 190 VAL 192 >UniRef50_A9GGQ6 Tfp pilus assembly protein, ATPase PilM n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GGQ6_SORC5 Length = 353 Score = 163 bits (413), Expect = 5e-39, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 61/176 (34%), Gaps = 8/176 (4%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTL- 59 M+ IG+ + I G + L R PL I DG +++AQ + + L Sbjct: 1 MSEGKNLIGVDIGSSAIKIAQIKEGRRGYGLVRLGYAPLAPQAIVDGHVMNAQAIVEALG 60 Query: 60 LPWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRF 119 +S ++ I L+ + R P M+ E + + + D + Sbjct: 61 RAFSEAKIRQREIALSISGQAVIIRKITVPLMTAA--ELDEQIQWEAEQHIPFDIKDVHV 118 Query: 120 DY-----SEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPF 170 DY ++ + AA+ E+ +A ++ + DA +Q Sbjct: 119 DYEVLRRRPEAGQMDLLLVAAKRDEINDYTQIARTAKLKPMVVDIDAFTVQNLFEV 174 >UniRef50_Q0EXA2 Type IV pilus biogenesis protein PilM n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EXA2_9PROT Length = 350 Score = 163 bits (412), Expect = 6e-39, Method: Composition-based stats. Identities = 29/186 (15%), Positives = 62/186 (33%), Gaps = 12/186 (6%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL-PWSREL 66 +G+ + V + R L +PL D I + I+D+ + + L+ + Sbjct: 2 LGIDISSTGIKLVELARNRSGFELVALAMIPLPRDAIVENTIIDSTAVTQALVDAVEQAR 61 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSE--- 123 P ++ LA + + ++ P E E + + + D D + D+ Sbjct: 62 PASKNVALAVSGNAVIIKTIAVPVA--TEFELEPQIEFEADQHVPYDIDDVFLDFHIQGM 119 Query: 124 ---DSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLAW 180 D + A + + + + + V + AL+ HQ +A Sbjct: 120 NAEDPEQMDVVLVACKREVVEDYQLVLGNAGLDVKCMDCAVFALENAAETTDEHQPPVA- 178 Query: 181 RDNEQW 186 + W Sbjct: 179 --GDDW 182 >UniRef50_A6T3G1 PilM type IV pilus assembly protein n=24 Tax=cellular organisms RepID=A6T3G1_JANMA Length = 360 Score = 159 bits (403), Expect = 6e-38, Method: Composition-based stats. Identities = 30/187 (16%), Positives = 65/187 (34%), Gaps = 13/187 (6%) Query: 8 IGLHLQQQEAVAVAIV-RGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKT-LLPWSRE 65 IGL + V + G E L+ + PL + DG I + Q++ L W + Sbjct: 17 IGLDISSSGVKLVELSEAGKNELRLECFASEPLPRGAVVDGNIENIDQVSDAVLRVWKKS 76 Query: 66 LPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDS 125 + + P + + + PS L E + ++ + D +R D+ Sbjct: 77 GTRAKFAAMGMPPASVITKKIILPSG-LSEESLELQVETEASQYIPFALDEVRLDFDVIG 135 Query: 126 ------LSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDAS----ALQRFLPFLPSHQ 175 + A + +++ + +AE + + + ++ A+ R +P+ Sbjct: 136 LVENSPDDVEVMLAATRKEKVEDRVAVAEAAGLKPTIMDIESYAARSAIARLTEQMPNRA 195 Query: 176 QCLAWRD 182 Q Sbjct: 196 QGQILGL 202 >UniRef50_Q1Q8Q3 Type IV pilus assembly protein PilM n=3 Tax=Moraxellaceae RepID=Q1Q8Q3_PSYCK Length = 351 Score = 158 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 26/178 (14%), Positives = 58/178 (32%), Gaps = 8/178 (4%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPW-SREL 66 IG+ + V I R L+ + L ++ D IVD + + T+ R Sbjct: 12 IGVDICTTSVKLVDIQRQQGVFHLRSYGTEILPEGVVIDKLIVDTEVVGNTIAGLARRCQ 71 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL 126 A S + + M L + E+ A + + + + + D+ Sbjct: 72 AAGSSAATAVSGSAVITKIIDM-DMVLSDVEREAQIRLDADQYIPYPLEDVNLDFEVLGP 130 Query: 127 S------PAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCL 178 S + A++S+ + + + + ++ A++R + L Sbjct: 131 SLINDDMVQVLLAASRSENVDQRVDALTFGGLQTKVMDIESHAIERAFGLMADSLPNL 188 >UniRef50_Q3A2N0 Tfp pilus assembly protein, ATPase PilM n=4 Tax=Desulfuromonadales RepID=Q3A2N0_PELCD Length = 354 Score = 158 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 23/179 (12%), Positives = 60/179 (33%), Gaps = 9/179 (5%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPW-SREL 66 +G+ + + V + + + L L I D I+D +A+ + + Sbjct: 13 VGIDIGTRSIKLVQLKQVKGKYQLVNLGIAQLPTSAIVDHAIMDLAAVAECVRSLVESQS 72 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL 126 Q ++ + + R+ P+MS + E + + + + + D+ Sbjct: 73 VQTKNVATSVSGHSVIIRNIFLPTMS--DDEVEVSIEWEAEQYIPFELSDVNLDFQILGP 130 Query: 127 SP------AYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLA 179 P + AA+ + L++ ++ + D AL+ ++ + Sbjct: 131 DPKDPSQIKVLLVAAKKDFIDEFLSVFNECGLNPVVMDIDCFALENVFQANYEQEEAVV 189 >UniRef50_Q1NMN0 Type IV pilus assembly protein PilM n=2 Tax=Deltaproteobacteria RepID=Q1NMN0_9DELT Length = 376 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 25/182 (13%), Positives = 61/182 (33%), Gaps = 9/182 (4%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSREL- 66 +GL + A + G L+ + + I DG +V+ + +A + L Sbjct: 35 LGLDIGSHAVKACELRHGPAGYHLETLGSALMPPEAIDDGALVEPEAVAGVISGLLTNLK 94 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL 126 + + ++ + + P M E ++ + + D D + D + Sbjct: 95 SKNRRVAISVSGYSVIVKRVTLPVM--EPAELENYIHDEAEQYIPFDIDDVYLDCHDLQT 152 Query: 127 SP------AYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLAW 180 + + AA+ + + L + + L + + DA +L+ + + Sbjct: 153 NSAGEEYTDVMLVAAKKELVDGYLEMLDSLGLTTVVVDVDAFSLENAFEAAADPHENVIL 212 Query: 181 RD 182 D Sbjct: 213 AD 214 >UniRef50_A0LFN4 Type IV pilus assembly protein PilM n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LFN4_SYNFM Length = 350 Score = 158 bits (399), Expect = 2e-37, Method: Composition-based stats. Identities = 21/176 (11%), Positives = 56/176 (31%), Gaps = 9/176 (5%) Query: 2 AFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLP 61 A K +GL + + L +P+ + +GR+ ++ + Sbjct: 3 AKKENLLGLDIGSHSVKLTQLKAKEGRLTLANVGLVPVPREAFNEGRVNKPDLVSNCIKH 62 Query: 62 WSRELP-QRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD 120 + L + + A + + P+M E E + + + + + + + + D Sbjct: 63 LTSHLKVKERTVATAVSGYEVMIKKIELPTM--TEEELDSRMHAELGQYIPYNIEEVDVD 120 Query: 121 YSEDSLS------PAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPF 170 Y ++ + AA+ + + + + + + D AL Sbjct: 121 YQVLDVAKDRPNYMGVLLVAAKKESIGDCVGIVRAAGLDTDVVDVDFFALSNAFEA 176 >UniRef50_Q31KD6 Type IV pilus assembly protein PilM n=2 Tax=Synechococcus elongatus RepID=Q31KD6_SYNE7 Length = 359 Score = 157 bits (397), Expect = 3e-37, Method: Composition-based stats. Identities = 32/229 (13%), Positives = 67/229 (29%), Gaps = 24/229 (10%) Query: 7 QIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL-PWSRE 65 ++G+ + + I R LQ + + L + + +DGR++D+ L+ L + Sbjct: 15 RLGVEITPERINLAHIGRKGNRLQLQDFVSVELPDGLFQDGRVLDSFSLSDLLRTAINDN 74 Query: 66 LPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDS 125 + + A P + R P P+ + ++ A L + DY + Sbjct: 75 RIRTKRVSTAVPGREVITRLLPMPAELDDAELRETLINQEAALFLPFPREEADIDYLKLD 134 Query: 126 --------LSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQC 177 + A + + L L + + + + AL R + Sbjct: 135 YFLDADEVEKLHVLLVATRRQVTDVYLDLFAQAGLTPDIVEVGSFALIRTIREALRQ--- 191 Query: 178 LAWRDNEQWLWATRYSWGRKLAVGMTSAKELAAALSVDPESVAICGEGG 226 + E L E+ + P G Sbjct: 192 --YGLQE----------AVILLNVEYDLTEIVIIVGGVPRFSRTIAMGT 228 >UniRef50_B7VLK2 Tfp pilus assembly protein, ATPase PilM n=32 Tax=Vibrio RepID=B7VLK2_VIBSL Length = 349 Score = 157 bits (397), Expect = 4e-37, Method: Composition-based stats. Identities = 28/190 (14%), Positives = 61/190 (32%), Gaps = 14/190 (7%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELP 67 G+ + AV + + L + LP+ +DI ++ Q+ K L + LP Sbjct: 15 TGIDINHHSIKAVVLKPVGELYALVGYKELPISDDIFTANHTLEYQKTVKKLKELRKGLP 74 Query: 68 QRHH-IMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL 126 + ++ P + + + L +RE+ + T A + + L D+ + Sbjct: 75 FGCRNVAISVPDNTVISKVLQI-ESDLEDREKEFSIYQTFAHQSPFPIEELSLDFVKLED 133 Query: 127 SP-------AYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLA 179 +Y + A + + + + + I A L Sbjct: 134 KRFGKGSTSSYQIYATRKEVVDSRADALNKAGFKPVVIDTQAHGLLNIWQLASR-----L 188 Query: 180 WRDNEQWLWA 189 + + WL Sbjct: 189 YPEKSNWLLV 198 >UniRef50_A1SRB1 Type IV pilus assembly protein PilM n=2 Tax=Psychromonas RepID=A1SRB1_PSYIN Length = 354 Score = 157 bits (397), Expect = 4e-37, Method: Composition-based stats. Identities = 23/171 (13%), Positives = 61/171 (35%), Gaps = 8/171 (4%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELP 67 IG+ A+A+ + + + +E +I D R + +L + + ++ P Sbjct: 14 IGIDFGSSAIKAIALSKRKGTFQIDAVAEIAVEKGVIVDHRFENIAKLTEIIKQLCKKFP 73 Query: 68 -QRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL 126 ++ +A + + + P + +L ++ + + D + D+ + Sbjct: 74 ASYQNVAIAVSGADVITKVIPM-NTNLNDQSLEYQVEIEAENSIPFPLDEIFLDFEIIRI 132 Query: 127 SPA------YNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFL 171 + V+AA+ + + + E + V + + L R L Sbjct: 133 NANNPDLKDVLVSAARKDTVLSQVHCIEEAGLQVKIVDIASHTLARACNLL 183 >UniRef50_C9NLF2 Type IV pilus biogenesis protein PilM n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NLF2_9VIBR Length = 305 Score = 157 bits (397), Expect = 4e-37, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 73/206 (35%), Gaps = 11/206 (5%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELP 67 G+ + Q AV + L + ++P+E DI D ++ Q++ K L + LP Sbjct: 7 TGIDISHQSIKAVVLKPEKDTFALVGYHQMPVEADIFTDNYRLNYQKIVKKLKELRKALP 66 Query: 68 Q-RHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSED-- 124 + L+ P S + + +L + E ++ AR+ +D ++L D++ Sbjct: 67 LFSRKVCLSVPDSSVISKQLQI-DSNLSDAECQFAITQAFARQSSVDVEALYLDFTSLSH 125 Query: 125 SLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLAWRDNE 184 + Y V A + + + + + + I P + L + Q Sbjct: 126 DKAQDYQVYAVRKGCVDSRVAPCLKAGMEPVLINPYSHNLAQLWRRAAKQYQ------QS 179 Query: 185 QWLWATRYSWGRKLAVGMTSAKELAA 210 WL ++W L Sbjct: 180 NWLLI-DFNWHSIALYCEAEPLRLID 204 >UniRef50_A6GHB3 Type IV pilus biogenesis protein PilM n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GHB3_9DELT Length = 351 Score = 157 bits (396), Expect = 4e-37, Method: Composition-based stats. Identities = 32/207 (15%), Positives = 71/207 (34%), Gaps = 11/207 (5%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELP 67 IGL + V I + + LQ + PL + I +G IVD + ++ +L + + Sbjct: 6 IGLDIGSSSVKLVQIKKSRRGTSLQNFGIEPLPPEAIVEGTIVDQEAVSNAILGLKKRIS 65 Query: 68 -QRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSED-- 124 + I +A + + R P+M + + + + D + D+ Sbjct: 66 LKGKDIAMAVSGNSVIIRRLHIPAM--EGAALAEQMEWEVRQNIPFARDEVIVDWEVLVE 123 Query: 125 ---SLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPF---LPSHQQCL 178 + AA+ + + +++ + + + DA A+Q + ++ Sbjct: 124 RTPDEQMEVCLVAAKKEIVEQYVSVVSAAGFNPAVVDTDAFAMQNAVETSVGFSPNETVA 183 Query: 179 AWRDNEQWLWATRYSWGRKLAVGMTSA 205 Q+ G + SA Sbjct: 184 VINIGSQFSTIAIIHNGNPVFHRNLSA 210 >UniRef50_D0SXT7 Tfp pilus assembly protein n=4 Tax=Acinetobacter RepID=D0SXT7_ACILW Length = 352 Score = 156 bits (395), Expect = 6e-37, Method: Composition-based stats. Identities = 18/180 (10%), Positives = 55/180 (30%), Gaps = 8/180 (4%) Query: 5 IWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTL-LPWS 63 IG+ + + + + +++ + +PL + + + I++ + +A L + Sbjct: 10 KGLIGVDISSTSVKVLELSVKSGRYWVESYALIPLSENSVVEKNILNPEAVADALGRAIN 69 Query: 64 RELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSE 123 Q + A P S + + + + E+ + + + D D+ Sbjct: 70 LGNTQSNQAAFAIPTSMVITKIIEM-DADMSDDEREVQIREDAEQYIPFPLDEASLDFEV 128 Query: 124 D------SLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQC 177 + A + + + + E + ++ AL+ Sbjct: 129 LPDRLSNPNRVNVLLVATRIENVEARSEVLEISSLMPKIADVESFALENAFKVFSDTLPM 188 >UniRef50_D0M6E3 Type IV pilus biogenesis protein PilM n=20 Tax=Vibrionales RepID=D0M6E3_VIBSE Length = 338 Score = 155 bits (392), Expect = 1e-36, Method: Composition-based stats. Identities = 22/173 (12%), Positives = 59/173 (34%), Gaps = 8/173 (4%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELP 67 G+ + AV + L + + L+ I+ + ++ Q++ KTL +ELP Sbjct: 7 TGIDIGHNSLKAVVLKPTGNNYALLGYKEILLKEGIVAENNTINHQEIVKTLKLIKKELP 66 Query: 68 -QRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL 126 + ++ P + + + +L + E + + + + L D+ Sbjct: 67 FGAKKVAISVPDNSVISKKLQI-EQNLEDSEVEFAVIQAFSHQSPFPVEELSLDFVRLRA 125 Query: 127 ------SPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPS 173 + Y V A + + + + ++ + + + +L Sbjct: 126 EDGLRGTDNYQVFATRKDVVDSRVDALQKSGLKPVLVDVHSQSLGHIWKLTAD 178 >UniRef50_B7J635 Type IV pilus assembly protein PilM n=2 Tax=Acidithiobacillus RepID=B7J635_ACIF2 Length = 354 Score = 155 bits (392), Expect = 1e-36, Method: Composition-based stats. Identities = 24/177 (13%), Positives = 55/177 (31%), Gaps = 8/177 (4%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLP-WSREL 66 +GL + V + + ++ L + D I+DA+ + + + R Sbjct: 10 LGLDISPDAVKLVELSKPRGGIRVEHADSEALPPGAVNDRDILDAEAVRRAVRAILERSR 69 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL 126 + + A PA+ + + P L E + + + D++ FD++ Sbjct: 70 IRTKAVATALPANAAIVKVIALPE-DLDEVGMEEQIRFESGQYIPYSIDAVNFDFAVLGP 128 Query: 127 SPA------YNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQC 177 + A + + + + E + + AL L S Sbjct: 129 DANRRGYNHILLVACKKEAVEDRAAVLEEAGLKPKIVDVKPFALWLLYEHLASVSPP 185 >UniRef50_B8D2D5 Tfp pilus assembly protein, ATPase PilM n=1 Tax=Halothermothrix orenii H 168 RepID=B8D2D5_HALOH Length = 352 Score = 155 bits (391), Expect = 2e-36, Method: Composition-based stats. Identities = 35/173 (20%), Positives = 63/173 (36%), Gaps = 6/173 (3%) Query: 1 MAFKIWQI-GLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTL 59 M F I + + AV + G + L + G I D +++ L Sbjct: 1 MFFGNKTITAVDIGSYAIKAVKMRAGKNGLNIITAGSRILPEKAVNQGEIQDYAVVSRIL 60 Query: 60 LPWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRF 119 E+ +I+ A P + R+ P +S E E T + L + F Sbjct: 61 KDVLEEINGSKYIITAVPGKNLIIRNMEMPLIS--EEELTEAIKWEADDYLPFPVEQAMF 118 Query: 120 DY---SEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLP 169 DY S+D + + + AA+ K + L+ + + + + + I AL L Sbjct: 119 DYILLSKDEENMSVLLVAAERKTINGLVKIFDNIGLKPAVINAQPMALISLLK 171 >UniRef50_B8FH96 Type IV pilus assembly protein PilM n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FH96_DESAA Length = 351 Score = 153 bits (388), Expect = 4e-36, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 68/189 (35%), Gaps = 12/189 (6%) Query: 1 MAFKIWQ---IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAK 57 MA Q +GL + I + L ++ + L I+DG I D +++A+ Sbjct: 1 MALFKKQEGLVGLDIGSAAIKIAEIEERKQSRVLAKFGLMELSEGAIEDGVIKDHEKVAE 60 Query: 58 TLLPWSREL-PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDS 116 T+ R ++ + ++ + ++ +M E E +S + L D Sbjct: 61 TIKDLCRAFNIKQLNAAISIAGYSVIIKNITVKTM--TEEEMQESISVEAEQYLPFDIQD 118 Query: 117 LRFDYSEDSLS------PAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPF 170 + D+ S + AA+ + +++ E +H + DA A+Q Sbjct: 119 VYLDFHIVGNSSERDGHMDVVLVAAKKDLVDEYVSVVEMAGLHPVVMDVDAFAVQNIYEL 178 Query: 171 LPSHQQCLA 179 L + Sbjct: 179 LSDVDDEIV 187 >UniRef50_C0QLC5 PilM n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QLC5_DESAH Length = 352 Score = 153 bits (388), Expect = 4e-36, Method: Composition-based stats. Identities = 27/181 (14%), Positives = 65/181 (35%), Gaps = 11/181 (6%) Query: 1 MAFKI--WQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKT 58 M F+ +GL + I +K L+++ ++ I +G I D + +A+ Sbjct: 1 MLFRKRDHLVGLDIGSSLVKVAEIRESSKGPVLKKFGITRIDPGAIVEGVIHDVEGVAEA 60 Query: 59 LLPWSR-ELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSL 117 + + + +I ++ + ++ P++S E+ + + + D + + Sbjct: 61 IRALFKTHRIKEKNIAISTGGYSVVIKTISLPTVS--EKVLQDSIRFEAEQYIPYDIEDV 118 Query: 118 RFDYSEDS------LSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFL 171 D+ + A + +A+ + L R ++ I D ALQ Sbjct: 119 NIDFQILGTSAFSPDQMNVLLVAVKKDLVASYMELTRRAGLNPCIIDVDTFALQNIYETA 178 Query: 172 P 172 Sbjct: 179 D 179 >UniRef50_A6FBL4 Type IV pilus biogenesis protein PilM n=1 Tax=Moritella sp. PE36 RepID=A6FBL4_9GAMM Length = 355 Score = 153 bits (386), Expect = 6e-36, Method: Composition-based stats. Identities = 21/166 (12%), Positives = 53/166 (31%), Gaps = 8/166 (4%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELP 67 IG+ A+A+ + ++ + + + D ++ D + L L ++ P Sbjct: 14 IGVDFGSSSVKALALSKRSEHYVVDMVSEVSTPKGCVVDHQLQDIEALTNVLQQVRQDFP 73 Query: 68 -QRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL 126 + A + + + L E + + D + D+ + Sbjct: 74 FRYKQAATAVSGTNVITKIIYV-DTDLSGPELEMHIELEAESLIPFPLDEISLDFEILGI 132 Query: 127 SP------AYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQR 166 + ++A +++ + +L E + A AL R Sbjct: 133 NDNNPGKHNVLLSATRTESVTSLAGCLEENDFIPQIVDVAAHALAR 178 >UniRef50_Q2LWT8 Pili assembly protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LWT8_SYNAS Length = 367 Score = 152 bits (383), Expect = 1e-35, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 58/171 (33%), Gaps = 11/171 (6%) Query: 8 IGLHLQQQEAVAVAI-VRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSREL 66 +GL + + L R+ +L L II DG + + L + + + Sbjct: 22 VGLDIGSSSLKLAEVVDDPRGGYLLNRFSQLSLPRGIIVDGILHETSLLTEKVKELFKTS 81 Query: 67 PQRHH-IMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMD-PDSLRFDYSED 124 R I+ + + + P+M E E + A+ L D D + FD+ Sbjct: 82 GNRRKGIVTSLSGHSVIIKKVDFPTM--EEEEMRDMIRDDAAQYLPFDNMDEVNFDFQIL 139 Query: 125 SLS------PAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLP 169 + + AA+ + + + + V + D+ AL+ Sbjct: 140 GENEYNPNLMEVLLVAARKDIINSYTDALKAAGLTVVIMDVDSFALETVYE 190 >UniRef50_A0L248 Type IV pilus assembly protein PilM n=25 Tax=Alteromonadales RepID=A0L248_SHESA Length = 359 Score = 152 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 29/189 (15%), Positives = 68/189 (35%), Gaps = 14/189 (7%) Query: 1 MAFKIWQ------IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQ 54 M +W+ +G+ + E A+ + + A + +P++ I D I DA Sbjct: 1 MLSNLWKRQAPQMVGIDIGSHEVKAILLSKTADGYKILSHAAVPVKKGAINDHDIRDADA 60 Query: 55 LAKTLLPWSRELPQR-HHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMD 113 + + L R LP+ + +A S + + SL E E A + + Sbjct: 61 VVECLKQIKRILPKSVKYAAVAVSGSAVMTKVIYM-DASLSEEEMEAQIEIEADNLIPYS 119 Query: 114 PDSLRFDYSEDSLSP------AYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRF 167 D + D+ +++ ++A ++ + + + + + + + AL R Sbjct: 120 LDEVSIDFETLNVNSTDPSKVDVLLSACRTDNIDARVDALDEVELETKVVDVEGYALGRA 179 Query: 168 LPFLPSHQQ 176 + + Sbjct: 180 VELVLGQLP 188 >UniRef50_Q1D0B0 Type IV pilus biogenesis protein PilM n=7 Tax=Myxococcales RepID=Q1D0B0_MYXXD Length = 395 Score = 152 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 24/167 (14%), Positives = 53/167 (31%), Gaps = 14/167 (8%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKE----CFLQRWWRLPLENDIIKDGRIVDAQQLA 56 MA +GL + + + K LQ + PL + I DG ++++ + Sbjct: 36 MAKGKLVLGLDIGSTSIKMILLKEQRKRGEVIYALQSFGMKPLPPEAIVDGALMNSTAIV 95 Query: 57 KTLLPWSRELP-QRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPD 115 + + EL + + + + + P MS E E++ + + + D Sbjct: 96 QAVQDLMSELKVKGKDVAIGVSGHSVIIKKIQMPRMSQDELEES--IQWEAEQYIPFDVK 153 Query: 116 SLRFDYSEDSL-------SPAYNVTAAQSKELATLLTLAERLRVHVS 155 + D + AA+ + T+ + Sbjct: 154 DVNIDTQILDGGGNDATGQMDVLLVAAKKDMINDYTTVVSEAGLAPV 200 >UniRef50_A0KN34 Type IV pilus biogenesis protein PilM n=3 Tax=Aeromonadaceae RepID=A0KN34_AERHH Length = 356 Score = 150 bits (380), Expect = 3e-35, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 60/174 (34%), Gaps = 7/174 (4%) Query: 9 GLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELPQ 68 G+ Q AV I + L+ + + D ++ D ++++++L R + Sbjct: 19 GIDFGSQTIKAVTITGRPGKLHLESVAEVATPKGTLVDYQLQDIERVSQSLKALKRLISG 78 Query: 69 RHH-IMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDS-- 125 + A S + + +LGE E + + + D + D+ Sbjct: 79 SSQYVATAVTGSNVITKVIQV-DAALGENELENQVQLEAEQLIPFPLDEVSLDFEILGKV 137 Query: 126 ---LSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQ 176 ++AA+++ ++ +T + + A AL R + Q Sbjct: 138 NDQERREVLLSAARTESVSGRVTALAEADMTTKVVDVGAHALGRAVLACLPELQ 191 >UniRef50_B0JRP3 Type IV pilus assembly protein n=26 Tax=Cyanobacteria RepID=B0JRP3_MICAN Length = 371 Score = 149 bits (376), Expect = 9e-35, Method: Composition-based stats. Identities = 36/237 (15%), Positives = 78/237 (32%), Gaps = 24/237 (10%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSREL- 66 +GL + + I + + L + + I ++G+IVD+ LA+ + +E Sbjct: 16 VGLEITPERINIAQIAKQGQNYKLVKCCSSDIPEGIFEEGKIVDSPALAELIQEVLKENK 75 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDS- 125 + A P ++ R P PS + + L+ + L + + DY + Sbjct: 76 INSKRVATAVPMRESIIRIIPIPSELDDQELRNLVLNHEASLYLPYPREEVDLDYQKLGY 135 Query: 126 -------LSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCL 178 + A + + + ++ + V + ++ AL R + + Sbjct: 136 FQDEDGIEKVQVLLVATRREITDAYMETFQQAGLQVDVLEINSFALIRTIR-----EHLR 190 Query: 179 AWRDNEQWLWATRYSWGRKLAVGMTSAKELAAALSVDPESVAICGEGGFDPWEAVSV 235 + NE + E+A + P+ G F A+S Sbjct: 191 QFSSNE----------AAVIVDIEFDNTEIAIVVDGVPQFSRTVPIGTFQLQNALSR 237 >UniRef50_A8ZSX9 Type IV pilus assembly protein PilM n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZSX9_DESOH Length = 351 Score = 148 bits (375), Expect = 1e-34, Method: Composition-based stats. Identities = 26/179 (14%), Positives = 60/179 (33%), Gaps = 11/179 (6%) Query: 1 MAFKIW--QIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKT 58 M F +GL + + + L R+ L + I + I D + +A T Sbjct: 1 MLFGKKDHLVGLDIGSSVVKVAEVAVSSSGRSLLRFGTLEMPAGAIVEEGIKDPEVVAAT 60 Query: 59 LLPW-SRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSL 117 + S + + ++ + + S+ E + ++ + + D +++ Sbjct: 61 IKELFSLYNIKEDRVAISIGGYSVIVKKINV--QSMSEEQLQEVIAVEAEQYIPFDINNV 118 Query: 118 RFDYSEDSLSPA------YNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPF 170 D+ + + AA+ + + L + + + I DA ALQ Sbjct: 119 NLDFQILGDNDQNPNQIDVMLVAAKKETVNDYLNVIDIAGLTPVIIDVDAFALQNIYEV 177 >UniRef50_Q0AF41 Type IV pilus assembly protein PilM n=14 Tax=Betaproteobacteria RepID=Q0AF41_NITEC Length = 374 Score = 147 bits (370), Expect = 4e-34, Method: Composition-based stats. Identities = 29/178 (16%), Positives = 65/178 (36%), Gaps = 12/178 (6%) Query: 1 MAFKIWQ-IGLHLQQQEAVAVAIVRGAK---ECFLQRWWRLPLENDIIKDGRIVDAQQLA 56 M + +G+ + V + R + L+R+ PL D ++DG I +Q++ Sbjct: 19 MLTGTSRMLGVDIGASSIKLVELSRKSGAPESYRLERYVIEPLPMDALQDGGINQIEQVS 78 Query: 57 KTLL-PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPD 115 +L R ++ I++A P + + + P+ L E + + + + D Sbjct: 79 DSLQHALKRMGTRQRKIVMALPLTSVITKRINVPAG-LREDDLVFQVETEANQYVPFAMD 137 Query: 116 SLRFDYSEDS------LSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRF 167 + D+ + AA+ ++ + A + V + + A Q Sbjct: 138 EVNLDFQVIGPAPDCPEEVEVLLAAARKDKVEDRVATAMSAGLKVMVMDIEQFAAQAI 195 >UniRef50_D0Z1J0 Type IV pilus biogenesis protein PilM n=5 Tax=Photobacterium RepID=D0Z1J0_LISDA Length = 332 Score = 146 bits (369), Expect = 6e-34, Method: Composition-based stats. Identities = 32/196 (16%), Positives = 66/196 (33%), Gaps = 16/196 (8%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 M +G+ + AV + + ++ L + + L + D V++ L + Sbjct: 1 MFRNPLSVGIDIGSHSIKAVVVQQKKEQLELAAFAEIVLSTPAVNDQHSVNSTVLLSAMR 60 Query: 61 PWSRELPQ-RHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRF 119 + LP+ ++LA P S + + SL + E +S + D L Sbjct: 61 KLKKHLPRAAKRVVLALPDSAVISKIVQL-DTSLSDDETEFAISQALGASSPFPLDELWL 119 Query: 120 DYSEDSLSPA---------YNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPF 170 D+ + S + + AA+ ++ L +A++ + + L Sbjct: 120 DFYPLNNSDRFQDIGSTVPFQIFAARRDTISARLEVAKKAGFKTQVMELQTNGLLWLAEH 179 Query: 171 LPSHQQCLAWRDNEQW 186 L EQW Sbjct: 180 LTEMS-----GLQEQW 190 >UniRef50_B3TAD8 Putative MreB/Mbl protein n=2 Tax=environmental samples RepID=B3TAD8_9ARCH Length = 384 Score = 145 bits (367), Expect = 1e-33, Method: Composition-based stats. Identities = 27/219 (12%), Positives = 57/219 (26%), Gaps = 44/219 (20%) Query: 1 MAFKIWQ--IGLHLQQQEAVAVAIVRGAKE-CFLQRWWRLPLENDIIKDGRIVDAQQLAK 57 M + + + V + + + L + +PL + I +G I +++A Sbjct: 1 MFLSKKTQLVAIDIGSSSIKLVQLSKIKEGEFELTHFGMMPLAEEWIVEGVIKQPERVAG 60 Query: 58 TLLPWSR-ELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDS 116 L + E Q H+ + A + P M E E + ++ + + D D Sbjct: 61 ALKNLIKAEKIQSHYAVSAVAGEAVFVKKIKVPVML--EGELSEKITQEAEQYIPFDIDE 118 Query: 117 LRFDYS--------------------------------------EDSLSPAYNVTAAQSK 138 + D+ D + A Q Sbjct: 119 VALDFQLLGTVKVEKAKESDSLQGSEFNEESQNNDPQQEDSDEETDGEMMEVLLVAVQRA 178 Query: 139 ELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQC 177 + + + + I + AL Sbjct: 179 IIDERTDILLEAGLKPAIIDLNVFALMNAAQLTNDLSSM 217 >UniRef50_Q5E2F4 Pili assembly protein PilM n=4 Tax=Gammaproteobacteria RepID=Q5E2F4_VIBF1 Length = 333 Score = 144 bits (364), Expect = 3e-33, Method: Composition-based stats. Identities = 28/192 (14%), Positives = 57/192 (29%), Gaps = 15/192 (7%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 M + GL + AV++ + L + + L + D ++ ++L L Sbjct: 1 MIYPT-ITGLDVGHHSIKAVSVRLKKGQLDLVSSFEVLLPESVFVDTNNLNVEELKPYLS 59 Query: 61 PWSRELP-QRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRF 119 ++L + + + P S + L ERE ++ + D L Sbjct: 60 RIKKQLKLNQKQVAFSIPDSSITSKVVQI-DSQLDERETEFAIAHNFEQHSSFSSDDLNI 118 Query: 120 DYSEDS-------LSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLP--- 169 DY + Y V A + + + E + ++AL Sbjct: 119 DYVASEHRGTGSLQTITYQVFATRKDLVNSRQRCFESAGLKPVLADAHSNALLTLWQRAI 178 Query: 170 --FLPSHQQCLA 179 + L Sbjct: 179 AVYPDKKNWMLI 190 >UniRef50_B1I3G2 Type IV pilus assembly protein PilM n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I3G2_DESAP Length = 345 Score = 143 bits (362), Expect = 4e-33, Method: Composition-based stats. Identities = 49/239 (20%), Positives = 75/239 (31%), Gaps = 16/239 (6%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQR---WWRLPLENDIIKDGRIVDAQQLAKTL-LPWS 63 +GL L EA AV + A W R+ L + DG + + + K L WS Sbjct: 10 VGLELDTVEARAVELRGKAGAAGAATLTAWGRVSLPPGAVVDGMVSQPELVGKALAELWS 69 Query: 64 RELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSE 123 ++L L R P M + + L + D+ +DY+ Sbjct: 70 AGRITSREVVLGVVNREVLVRFAVVPVMPRTK--LFGVIRHHARDLLPIPLDTAVWDYTV 127 Query: 124 DSLSPAY-------NVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQ 176 P + AA+ + L L R+ I + AL R +P P+ Sbjct: 128 IGERPGLESRMFELLLVAARREMLDGFLLALAFARLEPRDIDVASLALLRVMPPSPADGA 187 Query: 177 CLAWRDNEQWLWATRYSWGRKLAVGMTSAK-ELAAALSVDPESVAICGEGG--FDPWEA 232 + + G S E AA + A+ G GG W A Sbjct: 188 VVLVDLGNGSSTVLVIARGMLRLARFVSVSLEAAAGMLGCSVEEALAGPGGTAHRQWPA 246 >UniRef50_A4J3B9 Type IV pilus assembly protein PilM n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J3B9_DESRM Length = 348 Score = 143 bits (362), Expect = 4e-33, Method: Composition-based stats. Identities = 37/216 (17%), Positives = 63/216 (29%), Gaps = 12/216 (5%) Query: 1 MAF--KIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKT 58 MAF +GL + V + A+ L ++ + + + DG +VD Q +A+ Sbjct: 1 MAFFKPAGAVGLQIDTGIIRVVELKGTARFASLVTAGQIDIPDHAVVDGIVVDVQTVAQA 60 Query: 59 LLP-WSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSL 117 + W R + ++L R P + + Q L +D L Sbjct: 61 IRDLWERHNIKDREVVLGICNQGVFMRYTTFPKIPDKKLAQA--LRFQAGEYFPIDNSQL 118 Query: 118 RFDYSEDSLSP-------AYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPF 170 FDY+ + AA+ L L E + + AL R L Sbjct: 119 VFDYAVLGEDKKANNIKLKVLLVAARKDLLDISLRTLEAAHLQPKVVDISYLALLRTLTR 178 Query: 171 LPSHQQCLAWRDNEQWLWATRYSWGRKLAVGMTSAK 206 + G + S Sbjct: 179 EQLSDSLVLVDLANGLTTIQLVHEGIPRFSRVISHS 214 >UniRef50_Q5ZX06 Type IV pilus biogenesis protein PilM n=6 Tax=Legionella RepID=Q5ZX06_LEGPH Length = 354 Score = 143 bits (360), Expect = 6e-33, Method: Composition-based stats. Identities = 22/177 (12%), Positives = 62/177 (35%), Gaps = 8/177 (4%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELP 67 +G+ + + I ++ ++ + R + ++ I D +A + L Sbjct: 13 LGIDISSSAVKILEISGSGEDICVEGYGREEIPASALEGNIIKDVDVVANCIKKLVERLK 72 Query: 68 -QRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL 126 ++ LA P S + + + L + E + + + D + D+ Sbjct: 73 FTSKNVALAVPDSAVISKVVQI-NEGLTDLEMEELVVIEADKYIPYPIDEINLDFEVLGH 131 Query: 127 SP------AYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQC 177 S + A++++ + T + A R + + ++ A++R + + Sbjct: 132 SAKSSSLLDVLIVASRAENVNTRVEAAHRAGLEPKVVDVESYAVERSVQQIAQELPA 188 >UniRef50_Q0AZI1 Tfp pilus assembly protein ATPase PilM-like protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AZI1_SYNWW Length = 353 Score = 143 bits (360), Expect = 7e-33, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 70/211 (33%), Gaps = 10/211 (4%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 M F+ IGL + ++ + + K L + +P N +I+ G+I+ +L K + Sbjct: 24 MLFRATGIGLDIGSKKIKLARVKKVKKGLELMDFASMPTPNGVIEYGKIIAPVELGKAIS 83 Query: 61 PWSRELP-QRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRF 119 +E+ + ++ A +F P M+ E + A + L D F Sbjct: 84 SLVKEMGWKGQKVISALSNQEIFFDNFILPRMNRRESRKAAL--YQSSSFLPFPLDEAAF 141 Query: 120 DYSED-------SLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLP 172 D AAQS ++ L + + ++ + A AL R Sbjct: 142 DIFFLREIENGQGRKREVFFAAAQSLQVEHLKKVCTLAGLRLTVVEIPALALNRLWNNNN 201 Query: 173 SHQQCLAWRDNEQWLWATRYSWGRKLAVGMT 203 + + + + + L Sbjct: 202 GKDLTVFLNIGYSYACFSVFQQEKLLFQRSF 232 >UniRef50_C0GE60 Type IV pilus assembly protein PilM n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GE60_9FIRM Length = 335 Score = 142 bits (359), Expect = 8e-33, Method: Composition-based stats. Identities = 28/177 (15%), Positives = 61/177 (34%), Gaps = 10/177 (5%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTL- 59 + K +GL AV + + ++P+ + + DG + + + +A L Sbjct: 3 LFGKGGVVGLEFDTGLIRAVEVRGKNGSAKVVAGGQVPVPDSAVSDGIVQEPEVVADALQ 62 Query: 60 LPWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRF 119 WS+ +++L + R P + + EQ L + + Sbjct: 63 KLWSKAGIGSKNVVLGMFNQGVIMRLINFPKVPKDKLEQA--LRLQAGEYFPIPLSQMIL 120 Query: 120 DYSEDS-------LSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLP 169 D++ + AA+ + L ++ +++V + AL R LP Sbjct: 121 DFAVVGEVENNGAEQYEVLLVAAKKTHMEPSLEALKKAKLNVDVVDATPLALMRALP 177 >UniRef50_Q2BLX5 Type IV pilus assembly protein PilM n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLX5_9GAMM Length = 353 Score = 140 bits (353), Expect = 4e-32, Method: Composition-based stats. Identities = 25/175 (14%), Positives = 57/175 (32%), Gaps = 8/175 (4%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTL-LPWSREL 66 +G+ + VA+ + L+ + + L + DG I D ++ T+ Sbjct: 13 VGVDVGSSSVKLVALSKSGNGFSLEAYAVVSLPPTAVIDGNIQDVIEVTTTIEKAVKVAG 72 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL 126 + + A PAS + + + E E + + + D + D+ Sbjct: 73 GKMSSAVAAVPASAVITKKIEMSNA-FTEFELEDQIKVEADQFIPYPLDEVALDFEVQGK 131 Query: 127 SPA------YNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQ 175 P + A + ++ + + D A++R P L + + Sbjct: 132 VPNNDSLNKILLVACRKSDVEQREDAIGGAGLKCLVVDVDTYAVERAFPLLINEE 186 >UniRef50_Q2JP21 Type IV pilus assembly protein PilM n=2 Tax=Synechococcus RepID=Q2JP21_SYNJB Length = 372 Score = 139 bits (351), Expect = 7e-32, Method: Composition-based stats. Identities = 28/239 (11%), Positives = 70/239 (29%), Gaps = 26/239 (10%) Query: 8 IGLHLQQQEAVAVAIVRGAKE-CFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRE- 65 +G+ + + + + L + + + + +GRI+D + L+ E Sbjct: 14 LGVDINPERIAVAQLKKQGNGRYRLAHYHSVDMPEGAMVEGRILDPSTVGLILMNLLNEN 73 Query: 66 -LPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSED 124 +P A P + R P+ + + L + D DY Sbjct: 74 KVPTNLPAATAVPVREAIVRLIRLPADLPADELRRVVLEQEAELYIPYPRDQADVDYQPL 133 Query: 125 S--------LSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQ 176 + A + + L + + + V + + +L R + Q Sbjct: 134 GLDLSQDGIERIEVLLVAIPKEVVDNYLEVLQAANLQVRCVELASFSLIRTIR-----DQ 188 Query: 177 CLAWRDNEQWLWATRYSWGRKLAVGMTSAKELAAALSVDPESVAICGEGGFDPWEAVSV 235 + + E L+ + E++ ++ P+ G + ++ Sbjct: 189 LIQYGPQE----------AVLLSSIGYDSSEISILVNGIPQFTRTVNIGTIHMRQVLAQ 237 >UniRef50_A0LUH5 Type IV pilus assembly protein PilM n=2 Tax=Actinomycetales RepID=A0LUH5_ACIC1 Length = 354 Score = 138 bits (348), Expect = 2e-31, Method: Composition-based stats. Identities = 31/176 (17%), Positives = 59/176 (33%), Gaps = 12/176 (6%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 MA + +GL + V + R+ ++ L ++DG + D +A L Sbjct: 1 MAGRA-PVGLDIGTSCVRGVEASIARGSVRIDRFGQVALPVGAVRDGEVADVDLVAAALR 59 Query: 61 P-WSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRF 119 WS + + L R + R P M L E ++ L +A L M + Sbjct: 60 RLWSEVGFKSRKVALGVSNQRVVVRQVDLPWMELAELRKS--LGYQVADFLPMPVEQAIL 117 Query: 120 DYSEDSL--------SPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRF 167 D+ + + A + + + R + +++ AL R Sbjct: 118 DFYPVEEYLNEAGARTLRVLIVAGAREMITNAVEAVRRAGLKPASVDLTPFALIRA 173 >UniRef50_Q1QZY8 Type IV pilus assembly protein PilM n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QZY8_CHRSD Length = 356 Score = 137 bits (344), Expect = 5e-31, Method: Composition-based stats. Identities = 31/176 (17%), Positives = 67/176 (38%), Gaps = 8/176 (4%) Query: 3 FKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTL-LP 61 + +G+ + + + + + PL + + RI D ++A TL Sbjct: 9 SQKGLVGVDITSATVKLIELESSGAGHRIASYAVRPLHEGAVVERRIRDLDEVANTLTRA 68 Query: 62 WSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDY 121 P + A PAS + ++ P+ SL + E A + R + + + FD+ Sbjct: 69 VEHARPHSRRAVAAVPASAAITKTLTYPA-SLTDDEIEARIQLESERHIPFPLNEVAFDF 127 Query: 122 SEDSLSPAY------NVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFL 171 L+ Y + A + +++ L + R + +A+ + A++R L Sbjct: 128 QRLGLNARYPDQQDILLVACRLQDVDRLADVLRRAGLEPAAVDVETFAMERAAGEL 183 >UniRef50_Q1IXL4 Type IV pilus assembly protein PilM n=5 Tax=Deinococci RepID=Q1IXL4_DEIGD Length = 392 Score = 136 bits (343), Expect = 7e-31, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 59/171 (34%), Gaps = 12/171 (7%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRE-L 66 IG+ + VA+ G LQ +P ++DG +++ Q +A L E Sbjct: 16 IGVEIGTSTIKVVALRPGTP-PVLQHAVMVPTPIGSMRDGLVIEPQAVANELKNLLAEHR 74 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDY----- 121 H + A P + R+ P M + ++ + R L D + D+ Sbjct: 75 ITARHAVTAVPNQSAVTRNIMVPRMERKDLQEA--IKWEAERYLPYPIDEVNLDFDLLDD 132 Query: 122 ---SEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLP 169 + + AA S+ +A + + + + + A R L Sbjct: 133 PATIPEDGQMEAVIAAAPSEAVARQVEVLRLAGLEPIIVDLKSFAALRALR 183 >UniRef50_D0L236 Type IV pilus assembly protein PilM n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L236_HALNC Length = 365 Score = 135 bits (341), Expect = 1e-30, Method: Composition-based stats. Identities = 28/198 (14%), Positives = 65/198 (32%), Gaps = 17/198 (8%) Query: 2 AFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTL-L 60 + K ++G+ + + + + + P+ ++D I D +A L Sbjct: 7 SSKNPRLGVDISSTAVKVLLLEKHRNGYRPVGFAIEPISPGAVQDKTITDTDVVAGALSR 66 Query: 61 PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD 120 SR + HI++A P S +L R + E E + + + D + D Sbjct: 67 ALSRSRAKTKHIVMAVPTSASLSRVLNISN-PGNEFELEEQVRMESDQYIPFPIDEVSLD 125 Query: 121 YSED---------------SLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQ 165 + + + A ++ + + +AE + V + ++ A+Q Sbjct: 126 FEPLRPEAGSKQKKRQPNEDSTMQVIMAATRTTNVEARVAVAEAAGLSVDVMDVESFAIQ 185 Query: 166 RFLPFLPSHQQCLAWRDN 183 + + R Sbjct: 186 NAFTEIIAPTLTAEDRAQ 203 >UniRef50_Q7NHV1 Glr2434 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NHV1_GLOVI Length = 343 Score = 135 bits (340), Expect = 1e-30, Method: Composition-based stats. Identities = 24/179 (13%), Positives = 55/179 (30%), Gaps = 9/179 (5%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSR-EL 66 +G+ + ++ + + K L+ P + GR+ + + +A+ L Sbjct: 18 MGVEIAPEQITIAQLEKRGKGLGLKHLVTAPTPAGAVAGGRVEEPEAVAEVLRDLIADHR 77 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDS- 125 + + A P + R P+ + + L+ L + D+ + Sbjct: 78 LKPGPVATAIPGREAVIRLIRLPADLQADELREVVLNQEAELYLPFSRNDAFVDFQPLAA 137 Query: 126 -------LSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQC 177 + AAQ + + L R + + + AL R L + Sbjct: 138 AVDPDGVKRQEVLLVAAQLSVVNSYLEALRRAGLTARVVDIASFALVRALREPLAQVPP 196 >UniRef50_Q72IW8 Pilus-associated protein pilM n=6 Tax=cellular organisms RepID=Q72IW8_THET2 Length = 377 Score = 134 bits (338), Expect = 2e-30, Method: Composition-based stats. Identities = 36/234 (15%), Positives = 69/234 (29%), Gaps = 17/234 (7%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRE-L 66 +GL + V + L+ P ++ +G + + LA+ + E Sbjct: 16 LGLEIGASALKLVEVS--GNPPALKALASRPTPPGLLMEGMVAEPAALAQEIKELLLEAR 73 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSED-- 124 ++ +++ A + R P M L E E+ + R + D + D++ Sbjct: 74 TRKRYVVTALSNLAVILRPIQVPKMPLKEMEEA--VRWEAERYIPFPIDEVVLDFAPLTP 131 Query: 125 ------SLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCL 178 V AA+ + +A +L + + A L + + Sbjct: 132 LSEVQEGEQVQVMVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLAEEPDR 191 Query: 179 AWRDNEQWLWATRYSWGRKLAVGMTSAKELAAALSVDPESVAICGEGGFDPWEA 232 + L S L G LS + AI D A Sbjct: 192 VFLV----LDIGAESTSLVLLRGDKPLAVRVLTLSGKDFTEAIARSFNLDLLAA 241 >UniRef50_Q6MPJ0 Fimbrial assembly membrane protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MPJ0_BDEBA Length = 351 Score = 134 bits (337), Expect = 3e-30, Method: Composition-based stats. Identities = 25/177 (14%), Positives = 52/177 (29%), Gaps = 9/177 (5%) Query: 1 MAFK-IWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTL 59 M FK IGL + + K L + P + + G IVD + + Sbjct: 1 MFFKSKKVIGLDIGSSSIKLAEMDVSGKGAQLLSFGFAPTPPNAVSGGEIVDIASVGIAI 60 Query: 60 LPWSRELPQRHH-IMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLR 118 E+ + I A + + + P M + + + D +++ Sbjct: 61 QQLINEVKTKRKIIATAMWGTAVIVKKITIPKMDRK--LIKDQIRFEAEQYIPFDINNIS 118 Query: 119 FDYSED-----SLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPF 170 + + + AAQ++ + + E + + AL Sbjct: 119 LAHHILNSSASPDAMDILLIAAQNELVTQYTQVIEVSGLTCGVLDVSGFALANAFEL 175 >UniRef50_A5D357 Tfp pilus assembly protein, ATPase PilM n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D357_PELTS Length = 348 Score = 134 bits (337), Expect = 3e-30, Method: Composition-based stats. Identities = 29/170 (17%), Positives = 56/170 (32%), Gaps = 10/170 (5%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLP-WSREL 66 +GL + AV + + L R+ + +++G + D + +A L W Sbjct: 10 VGLDIDAGVIRAVELKGRTRAAALAAAGRIEIPAGAVEEGAVADVEVVAGALKELWKDAR 69 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL 126 +++ L R P + + E+ + + + L D+ Sbjct: 70 IGSRDVIVGVSNQVVLMRIARLPKVPANKLEK--VVRFQAGDYFPIPLEQLVLDFFLIGE 127 Query: 127 -------SPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLP 169 + AA+ + L LL + AI + AL R LP Sbjct: 128 VEGGDGPEMEVLLVAARRENLGGLLDALSAASLRPLAIDASSLALLRTLP 177 >UniRef50_B4F032 Putative uncharacterized protein n=4 Tax=Proteus RepID=B4F032_PROMH Length = 274 Score = 134 bits (337), Expect = 3e-30, Method: Composition-based stats. Identities = 56/278 (20%), Positives = 101/278 (36%), Gaps = 34/278 (12%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 M +QIG+ + AV + + K+ + +W+ PL + D +D L L Sbjct: 1 MKTDNYQIGIEININHINAVLVFQQNKQWKINAFWQFPLP---LNDN--IDDINLRTILK 55 Query: 61 PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGERE---QTAWLSGTMARELDMDPDSL 117 W + LP + + LA P + + ++ + A L T ++ + ++ Sbjct: 56 RWQQSLPPINRVALALPDTVASYHTIALSNLISLTPAAYYRLAQLRATSHQQ--VTKQAV 113 Query: 118 RFDYSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLP-SHQQ 176 +FDY + + A ++ + T + L ++ + ++AI A AL+ L S Sbjct: 114 QFDYRQHNQHLAIHLH--NKTLIETYIALFAKINLTITAIDIPACALRYVATHLNISPHS 171 Query: 177 CLAWRDNEQWLWATRY----SWGRKLAVGMTSAKELAAALSVD---PESVAICGEGGFDP 229 L + N Q LW +G ++ L + P+ C G D Sbjct: 172 ILIFCQNNQMLWVCADKEMPHYGTLSYQDHQEQEKQLQQLLIKHHWPQEQ--CYFSG-DN 228 Query: 230 WEAVSVRQPPLPPPGGDF-----------AIALGLALG 256 E + P P IA+GLAL Sbjct: 229 AEYFRQQMPIWPTQKERLFMSIPPKKTLPLIAIGLALR 266 >UniRef50_B7GH54 Tfp pilus assembly protein, ATPase PilM n=8 Tax=Bacillaceae RepID=B7GH54_ANOFW Length = 322 Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 68/212 (32%), Gaps = 16/212 (7%) Query: 1 MAFKIWQIG-LHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTL 59 + ++G + ++ V + + L PL I++DG+IVD +QL + Sbjct: 3 LFTMKNKVGNIVIKDHVIRYVELKQKQP-LVLHTCEEWPLPEGIVRDGKIVDEEQLTHIM 61 Query: 60 LP----WSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPD 115 W + I P + R+ P P E ++ + + + + Sbjct: 62 EQCVDMWKM---KHRRIRFLVPDPLVVVRNIPLPKDIAHEDIRSYLFM-EIGASIPLPFE 117 Query: 116 SLRFDYSEDSLSPA---YNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPF-- 170 FDY+ + + AA + + L E +++ +L R Sbjct: 118 DAVFDYTVLEKTKEALHVLLFAAPETNVMQYVELFETVKLKPIVADISPLSLYRLFYHFH 177 Query: 171 -LPSHQQCLAWRDNEQWLWATRYSWGRKLAVG 201 L + + L + + R L Sbjct: 178 LANDVDHFLFVQFDLSSLNVSVFYQHRPLFTR 209 >UniRef50_Q1IGB2 Putative type IV pili biogenesis protein PilM n=1 Tax=Pseudomonas entomophila L48 RepID=Q1IGB2_PSEE4 Length = 291 Score = 132 bits (332), Expect = 1e-29, Method: Composition-based stats. Identities = 30/184 (16%), Positives = 61/184 (33%), Gaps = 14/184 (7%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELP 67 +G+ + + + R + W P+ G + L + R Sbjct: 13 LGVEIASDTIRMLQLRRQRGHWRVAAWACEPI---TRPMGHSQLPEALREAHR---RCGT 66 Query: 68 QRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSLS 127 + + LA P+S+ + + P+ + + L + D L D+ +S Sbjct: 67 PQRRVALALPSSQVICKVCQLPAETARFDAEVRLL-AQAEQLFPFPLDDLALDFQVLGVS 125 Query: 128 PA------YNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPF-LPSHQQCLAW 180 V A + +L L + + + V+A+ D+ AL R + P+ L Sbjct: 126 AGSPAHIDVLVAACRQSQLDPLEHMFNQAGMQVAAMEVDSFALLRAMGVEAPADLALLQL 185 Query: 181 RDNE 184 E Sbjct: 186 EAGE 189 >UniRef50_A5WAB6 Tfp pilus assembly protein ATPase PilM-like protein n=4 Tax=Pseudomonas putida RepID=A5WAB6_PSEP1 Length = 293 Score = 131 bits (329), Expect = 3e-29, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 60/178 (33%), Gaps = 7/178 (3%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELP 67 +G+ + + + + + + + + + D + +A R Sbjct: 13 VGVEITPDAVRIMQLQQRNRLWRVMGSAQELFQAPLADDWAEAPGEVVAALQRACRRSGL 72 Query: 68 QRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSLS 127 ++ + LA PAS+ + + P G + A L R + L D+ S Sbjct: 73 RQRRVALALPASQVICKLCHLPVEQSG-AQLEAQLLADAERLFPFPLEDLALDFQVMGAS 131 Query: 128 ------PAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLA 179 V A + LA+L ++ E + + A+ D AL R LP L Sbjct: 132 HDQPGCSEVMVAACRQSALASLESVVEEAGLQLEAVEVDTIALCRMLPQGGLEGAALL 189 >UniRef50_Q1AW01 Type IV pilus assembly protein PilM n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AW01_RUBXD Length = 379 Score = 130 bits (328), Expect = 3e-29, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 52/168 (30%), Gaps = 9/168 (5%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSR-EL 66 IG+ + + AV + L+ L +I G + D + LA L + Sbjct: 16 IGMDIDRSAIKAVQLSGSPGGYVLEHVGYRRLPEGVISGGEVSDPELLAAELRSFRETHA 75 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL 126 + ++L + + R P M E L+ + + + D++ Sbjct: 76 FRGRSVLLGVANEQVVVRFVSFPRM--EPGELAGALAFQAQDYIPVPLEEAVLDHAVLGP 133 Query: 127 SPA------YNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFL 168 SP + AA+ + + L + A L R Sbjct: 134 SPENPGEDRVLLVAARKEMVRRLTAAVRSGGFRPVGVDVKALCLLRSA 181 >UniRef50_A1SFR2 Type IV pilus assembly protein PilM n=1 Tax=Nocardioides sp. JS614 RepID=A1SFR2_NOCSJ Length = 383 Score = 130 bits (328), Expect = 3e-29, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 61/184 (33%), Gaps = 15/184 (8%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLP-WSREL 66 +GL + A V G + L+R+ +LPL + +++ G + D + L + L WS+ Sbjct: 6 VGLDIGSSGVRAAEFVPGRRRPTLRRFAQLPLPSGVVRAGVVADGEALTEALKELWSKGK 65 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL 126 ++ L + L R M + + L + L D D+ Sbjct: 66 FGSRNVALGVANAGVLVRQLDLDWMPPADFRKA--LRYQVQDVLPFSVDEANLDHHLLEE 123 Query: 127 SPAY------------NVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSH 174 + AA + + A R R+ + + AL R + Sbjct: 124 LDVVGEDGTARRVARILLVAASRDMVDAFVDSARRARLRIQTVDLLPFALLRARTPMVQD 183 Query: 175 QQCL 178 + Sbjct: 184 GPAV 187 >UniRef50_Q15Y38 Type IV pilus assembly protein PilM n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15Y38_PSEA6 Length = 376 Score = 130 bits (327), Expect = 4e-29, Method: Composition-based stats. Identities = 23/178 (12%), Positives = 55/178 (30%), Gaps = 8/178 (4%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSREL- 66 IGL + + AV + + + + P+ + + + D + L++ L L Sbjct: 14 IGLDIGTRYVKAVLLEQTKQSTTVLAIACEPINGNAFAEREVKDYEALSQALKKVKLSLK 73 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSED-- 124 + +++A + + L + E + + + + + D+ Sbjct: 74 TKVKQVVIAVSGPAVINK-LAYMDDDLTDVELESQIELEADSLIPYPLEEIYLDFERLAP 132 Query: 125 ----SLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCL 178 S ++A L + LTL + + AL L + Sbjct: 133 SVNYSGKVEVLLSAVHKDMLDSRLTLLNEVGFEPKISDVEVYALANALMHFSHQPSPV 190 >UniRef50_C1ABF4 Putative type IV pilus assembly protein PilM n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1ABF4_GEMAT Length = 404 Score = 128 bits (323), Expect = 1e-28, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 62/172 (36%), Gaps = 8/172 (4%) Query: 4 KIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLP-W 62 K +GL + AV I + L + PL + I +G ++D +A + Sbjct: 64 KKLTVGLDVGSGLVKAVVIDHSSGTPELAKVVITPLNDTAIVEGEVMDHGIVADAIRQTL 123 Query: 63 SRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYS 122 S + HI+ A + + + E + + + + D DS+ D+ Sbjct: 124 SATGIKTKHIVTAVGGRDVIVKKITM--ERVKEAQARELMRWEAEQHVPFDMDSVELDFQ 181 Query: 123 E-----DSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLP 169 D L + + AA+ + + + +L + S I DA AL Sbjct: 182 VLDPDSDGLDMSVLLVAAKRELVESKQSLLQEAGATASVIDVDAFALHNAFE 233 >UniRef50_B4S0G1 Putative Type IV pilus biogenesis protein PilM n=1 Tax=Alteromonas macleodii 'Deep ecotype' RepID=B4S0G1_ALTMD Length = 355 Score = 128 bits (322), Expect = 2e-28, Method: Composition-based stats. Identities = 24/175 (13%), Positives = 58/175 (33%), Gaps = 8/175 (4%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELP 67 +GL + ++ AV + + + LQ + P+ + I D + ++ L + L Sbjct: 13 VGLDIGTRQIKAVWLEQSKEGFVLQGYACEPINKIAFSERDIKDYESVSIALKKIRKSLK 72 Query: 68 QRHHIM-LAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL 126 + + +A + + + + + + + + + D+ E Sbjct: 73 TKLKLANVAVAGTSVISKIVYM-EPEQNDYDLENQIEIEADSLIPYPLEEVYLDFEEMGP 131 Query: 127 SP------AYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQ 175 S +TAA + + L LA + + A+ L F + Sbjct: 132 SATHTGKVNVLLTAAHKDLVDSRLLLAREANFEPKIVDMENYAIGNALDFFHTPH 186 >UniRef50_Q48PH6 Type IV pilus biogenesis protein PilM n=9 Tax=Bacteria RepID=Q48PH6_PSE14 Length = 354 Score = 128 bits (321), Expect = 2e-28, Method: Composition-based stats. Identities = 17/177 (9%), Positives = 54/177 (30%), Gaps = 8/177 (4%) Query: 5 IWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSR 64 +G+ + + + R ++ + PL + + + I + + + + L Sbjct: 10 NTLLGIDISSTSVKLLELSRSGTRYKVESYAVEPLPANAVVEKNIAELEGVGQALSRVLA 69 Query: 65 ELPQRHHIMLAFPASRT-LQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSE 123 + I+ A + ++ L + + L + + + + D+ Sbjct: 70 KAKTSVKIVAVAVAGSAVITKTIEM-DAGLSDDDMENQLKLEADQYIPYPLEEVAIDFEV 128 Query: 124 ------DSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSH 174 + + A + + + + + +A AL+R L + Sbjct: 129 QGYSVRNPERVEVLLAACRKENVEVREAALALAGLTARVVDVEAYALERSFGLLAAQ 185 >UniRef50_C0DV42 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DV42_EIKCO Length = 351 Score = 127 bits (320), Expect = 3e-28, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 68/201 (33%), Gaps = 19/201 (9%) Query: 1 MAFK-IWQIGLHLQQQEAVAVAIVRG-AKECFLQRWWRLPLENDIIKDGRIVDAQQLAKT 58 M+F +G+ + V + L+ + PL +I +G I D QL Sbjct: 1 MSFGSKGCLGVDITPTAINMVHLAGSVPGNLRLENYAIQPLPKGVIINGNIEDHDQLVSY 60 Query: 59 LLPWSRELPQRHH-IMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSL 117 L ++L + A P + T ++ + ++ ++ + D+L Sbjct: 61 LQQAYQQLGSSCKNVTAALPQALTNIQTITY-DARSSDLPVDEFVELEASQTIG--SDNL 117 Query: 118 RFDYSEDSL--SPAYN---VTAAQSKELATLLTLAERLRVHVSAITPDASALQRFL---- 168 +D+ + + + AA+ ++ L + +S + D A+ Sbjct: 118 SYDFQVTAELQNGNVQEIVMAAAKRDDVDLRTDLFADADIPLSQLDVDTFAVVNAFSVWI 177 Query: 169 ----PFLPSHQQCLAWRDNEQ 185 P L + + D +Q Sbjct: 178 DQFAPDLEHQKLAIFHVDEDQ 198 >UniRef50_A6D0C0 Fimbrial assembly protein PilM, putative n=1 Tax=Vibrio shilonii AK1 RepID=A6D0C0_9VIBR Length = 327 Score = 127 bits (318), Expect = 5e-28, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 62/186 (33%), Gaps = 12/186 (6%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 MA + W G+ + AV + + + L I D + Q+ K L Sbjct: 1 MA-RKWITGIDIGHHSTKAVVLAYEGSDIKIVNQLELNGCAAIFADPYTLKHQETVKKLK 59 Query: 61 PWSRELPQ-RHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRF 119 + +P R +A P S + + L E + M+ + D ++L Sbjct: 60 ILRKIVPIFRKQAAIAIPESTVVSKVINL-DARLVNDELEYAVHQAMSYQTPYDSEALAI 118 Query: 120 DY---------SEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPF 170 DY + + AY V A+ + + + + L I+ + AL+ Sbjct: 119 DYVAVPPQNEPHPNQETAAYQVHVARHNIIDNRIQVVKALGFKPQLISTNIHALRSVQKL 178 Query: 171 LPSHQQ 176 + + Sbjct: 179 VLTTYP 184 >UniRef50_C6CY61 Fimbrial assembly family protein n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CY61_PAESJ Length = 500 Score = 127 bits (318), Expect = 6e-28, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 72/189 (38%), Gaps = 9/189 (4%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 M ++GL L + + K +++ LP + +I + + + ++L +L Sbjct: 1 MLDSSKRVGLTLDHGGVRYARVRKRKKGWEIEKTGFLPFADGVILEDQFTNMEELRSSLK 60 Query: 61 PW-SRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRF 119 W +E I L+ P S+ + R +++ E +Q ++ + L + + + Sbjct: 61 DWVKKERLNGTSITLSIPTSQIIIRKLQIGTVNTKELDQ--LINLEVETALHLPFEDPVY 118 Query: 120 DYSE---DSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRF--LPFLPS- 173 DY + S V A+ + L + L E + V ++A R ++ S Sbjct: 119 DYIAAGSEEQSTNVLVYASPQRWLKQCIELLESTGLKVKYAELASTAFARAIQARYIDSL 178 Query: 174 HQQCLAWRD 182 L D Sbjct: 179 DNTMLIHLD 187 >UniRef50_C8W5I8 Type IV pilus assembly protein PilM n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W5I8_DESAS Length = 350 Score = 123 bits (310), Expect = 4e-27, Method: Composition-based stats. Identities = 28/207 (13%), Positives = 55/207 (26%), Gaps = 10/207 (4%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLP-WSREL 66 +GL V + A L ++ + ++ + +G + D +A L W++ Sbjct: 11 VGLEFDTGVIRFVKLKGSAPPFTLVGAGQIEIPDNAVAEGIVEDVPAVAGALEELWNKSQ 70 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL 126 + L L R P + + + + L D++ Sbjct: 71 VGSREVTLGIFNQGVLFRRAVFPKLEQKK--LAQVVRYQSDDYFPVPVSELVLDFAVVGE 128 Query: 127 -------SPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLA 179 + + A Q + L L + + I AL R +P L Sbjct: 129 LEGENGPALDVLLVAVQREILEKSLHVLTAAGLRPLVIDASPLALARTVPRTRLAGTVLV 188 Query: 180 WRDNEQWLWATRYSWGRKLAVGMTSAK 206 S G + Sbjct: 189 IDIANGLTTLFLVSGGVPMLARSLPHS 215 >UniRef50_Q46WI8 Type IV pilus assembly protein PilM n=12 Tax=cellular organisms RepID=Q46WI8_RALEJ Length = 367 Score = 123 bits (310), Expect = 5e-27, Method: Composition-based stats. Identities = 29/173 (16%), Positives = 67/173 (38%), Gaps = 10/173 (5%) Query: 4 KIWQIGLHLQQQEAVAVAIV--RGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLP 61 + +G+ + V + ++ L++ L+ + + DG +++ + + L Sbjct: 17 RRTTVGVDIGSSSVKVVELSVGGSKQDYRLEKCASELLDRNAVADGNVINIEAVGIALKR 76 Query: 62 -WSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD 120 + + ++L P+ T ++ P +L E E + + R ++ FD Sbjct: 77 ALGKAGIRSKDVVLGVPSMLTESQTVSLPD-NLSEDELYSQVESEAHRLYP-PSQTVNFD 134 Query: 121 YSEDSLSP-----AYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFL 168 ++ S VTAA S + +T AE + + + A+QR + Sbjct: 135 FAVIGPSETEGGIGVRVTAANSDRVQERVTAAEMAGLRPQVMDVEEYAVQRTI 187 >UniRef50_Q4KJJ4 Type IV pilus biogenesis protein PilM n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KJJ4_PSEF5 Length = 353 Score = 122 bits (306), Expect = 1e-26, Method: Composition-based stats. Identities = 21/161 (13%), Positives = 54/161 (33%), Gaps = 8/161 (4%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTL-LPWSREL 66 +G+ + +A+ R + ++ + R PL + + D I D + LA L W + Sbjct: 13 MGIDINATSVTLLALGRQGQGYRVEAYAREPLAPNTVLDQHIADPEALAAALSRAWLKTG 72 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSE--- 123 + +A + + P+ L E + + + + + D+ Sbjct: 73 SRLKGAAVAVVGEAVISKLIEMPAG-LHTDELEQQVRLEAGQYIPYPLEDVALDFEVQGP 131 Query: 124 ---DSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDA 161 + + A +++ + L T+ + + Sbjct: 132 VPGNPQRVQVLLVACRNERVEALETVLGLAGLTARVVDTQP 172 >UniRef50_A5KSX7 Type IV pilus assembly protein PilM n=3 Tax=candidate division TM7 RepID=A5KSX7_9BACT Length = 348 Score = 122 bits (305), Expect = 2e-26, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 67/179 (37%), Gaps = 11/179 (6%) Query: 10 LHLQQQEAVAVAIVRG-AKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL-PWSRELP 67 L + V + G L ++ P++ I Q+L + + + Sbjct: 13 LDIGTTAIRVVQLSHGSNDTWNLVKYGHAPVDIKISTSDSAQAQQKLGEVITTAIGQSGV 72 Query: 68 QRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL- 126 + ++L P+S++ P+MS E+E + + + M PD + D++ Sbjct: 73 KTKDVVLGIPSSKSFTTVVEVPNMS--EQELRGTIKYQADQYIPMSPDEAKVDWALLGQS 130 Query: 127 -----SPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQR-FLPFLPSHQQCLA 179 + + + + + L L E L ++V A PD+ A+ R LP + L Sbjct: 131 LHDAQKMEVLLASVANNYIESRLDLVEGLGLNVIAAEPDSIAMVRSLLPAGITDAWLLI 189 >UniRef50_A1HQ14 Type IV pilus assembly protein PilM n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQ14_9FIRM Length = 382 Score = 120 bits (302), Expect = 4e-26, Method: Composition-based stats. Identities = 33/204 (16%), Positives = 69/204 (33%), Gaps = 11/204 (5%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSR-EL 66 +G+ + A +V + + + L + I+++G I D+ L +TL Sbjct: 43 LGIDIGTGAAKLAEVVCRRGQPLVMAVGMVDLPDGIMENGYINDSAMLTQTLRQLLAVSG 102 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL 126 + + A R P+M E E + + + + +PDS +D++ Sbjct: 103 ARGRDAVFAVGGKSIYVREMLFPTM--TEEELREAIKWDIEKYVPYEPDSYYYDFAVVGP 160 Query: 127 SPA-----YNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLAWR 181 + A + ++ +A+ L + AI + AL R L + L Sbjct: 161 GKNEREIKVLLVAVPRPIVDSITAVAKELGLRPVAIDIEPLALYRT---LAEAENALVID 217 Query: 182 DNEQWLWATRYSWGRKLAVGMTSA 205 Q + + G + Sbjct: 218 IGCQLSQVSVFQQGSLAVTRAIAV 241 >UniRef50_C9R931 Type IV pilus assembly protein PilM n=1 Tax=Ammonifex degensii KC4 RepID=C9R931_AMMDK Length = 334 Score = 120 bits (301), Expect = 5e-26, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 52/167 (31%), Gaps = 12/167 (7%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELP 67 +G+ + E I + RLP + G + D ++L L P Sbjct: 15 VGIDVGTAETKMAEIRVTNGGPEVLALRRLPSPPGVW--GDVFDEEKLIGVLRELE---P 69 Query: 68 QRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLR-----FDYS 122 ++ P + + R P MS EREQ + + R L D L + Sbjct: 70 GTREVISCLPGDKVVSRILRLPPMSDREREQA--VRLEVERFLPTPVDELIIRSVWLEDK 127 Query: 123 EDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLP 169 + A + + L R + + + A AL R Sbjct: 128 AGGEGRRCLILAVPAALVYRYHALFSRAGLVLGVLDLPAFALHRLFQ 174 >UniRef50_UPI0000E0EF0E Type IV pilus assembly protein PilM n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0EF0E Length = 356 Score = 117 bits (294), Expect = 3e-25, Method: Composition-based stats. Identities = 24/176 (13%), Positives = 56/176 (31%), Gaps = 10/176 (5%) Query: 8 IGLHLQQQEAVAVAIVRGAK--ECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRE 65 +G+ + AV + G + E Q + K+ I+D + TL + Sbjct: 14 LGIDIGTTFIKAVLLAPGKQPSEWQCQGIACELIPTSAFKERDILDFDSIVITLKQIMLK 73 Query: 66 LPQRHHI-MLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSED 124 L + ++A S + + P L + + + + + +D+ Sbjct: 74 LSLKQQATVIAVSGSAVISKMIRMPK-QLNDLHLEEHIHIEADSLIPYQLEHVYWDFERV 132 Query: 125 SLS------PAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSH 174 +T A + + +T+ + + + AL+ + F H Sbjct: 133 PQRSTHSHFDNVLLTVAHKQLVDNRMTVVREAGLKPVIVDTELDALENLVLFNNDH 188 >UniRef50_A5GWJ6 Putative uncharacterized protein SynRCC307_2352 n=1 Tax=Synechococcus sp. RCC307 RepID=A5GWJ6_SYNR3 Length = 308 Score = 116 bits (291), Expect = 6e-25, Method: Composition-based stats. Identities = 33/228 (14%), Positives = 70/228 (30%), Gaps = 12/228 (5%) Query: 4 KIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLP-W 62 ++ ++ + ++ +A + LQ W + PL + +++ G + + L + Sbjct: 21 RMGRVAVAMEADALTLLAYQTIGGQLQLQSWQQAPLPSGVVEAGVPLLTEALGDLIGDVL 80 Query: 63 SRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLS-GTMARELDMDPDSLRFDY 121 + Q P + RS P+ + E WL A L + Sbjct: 81 LQGGLQAPGARALLPPEAVVLRSLKLPAGRQPDAEIIPWLMGQEAALALPFPLAEAAVSW 140 Query: 122 SEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLAWR 181 + + +++L + + + + P A++R LP Q W Sbjct: 141 Q--QRGDHWLLACMPNEQLDRWIDTFAIAGLDLHGLEPSVLAVERLLPAPLQQQDPQQWT 198 Query: 182 -----DNEQW---LWATRYSWGRKLAVGMTSAKELAAALSVDPESVAI 221 E W LW + + EL A ++ Sbjct: 199 GSLDVRGESWQLLLWRGAVPLRQLSLASASGLDELQAVIAELDGQQPT 246 >UniRef50_B2A7F8 Type IV pilus assembly protein PilM n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A7F8_NATTJ Length = 347 Score = 115 bits (288), Expect = 1e-24, Method: Composition-based stats. Identities = 25/173 (14%), Positives = 59/173 (34%), Gaps = 7/173 (4%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLP-WSREL 66 +G+ L + V + + + L+R+ +G +Q+ + L + Sbjct: 13 LGIDLGRSSIKIVELSKLRSKFVLKRFTIEEFSVPQDDEGDNQ-GEQIGQYLRECLDKYK 71 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL 126 + + LA + R+ P M E + + M + D+ Sbjct: 72 IKNKNAYLAIKNDDVVIRTISFPPMPQS--ELAQAVDYEADNYIMMPKNQANVDWHILKQ 129 Query: 127 SPA---YNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQ 176 + AA+ + + E + + A+ + +L+R + FL +H + Sbjct: 130 DEHGITVLLLAARKDLINKYHEVCETAGIKLKALDVEVFSLKRLVDFLETHNK 182 >UniRef50_B5YJ54 Putative uncharacterized protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YJ54_THEYD Length = 312 Score = 114 bits (285), Expect = 3e-24, Method: Composition-based stats. Identities = 30/170 (17%), Positives = 58/170 (34%), Gaps = 12/170 (7%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWS-REL 66 +G+ ++ + + L +W L N + IVD+ L KTLL + Sbjct: 3 LGIEIEPSSIRIAQMSKK---YELVQWEIFELPNGVFGSEGIVDSDTLIKTLLKIPPKFN 59 Query: 67 PQRHHIMLAFPASR-TLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDS 125 + + LA T + P ++ + E L + + + + +D+ Sbjct: 60 IKDLKVALAISGPTYTAVKILQVPYIN--KDEIALNLPLELDKYIPFSVKEVYYDFHILE 117 Query: 126 LSP-----AYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPF 170 S V A + + + + ER + + AI A AL Sbjct: 118 QSKNRNSAELLVAVANKQIVDEYVNIFERAGITLVAIDIGALALYNIYEV 167 >UniRef50_B0TEF6 Type iv pilus assembly protein pilm n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TEF6_HELMI Length = 377 Score = 114 bits (285), Expect = 3e-24, Method: Composition-based stats. Identities = 31/182 (17%), Positives = 61/182 (33%), Gaps = 10/182 (5%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 M +G+ + V + R + + + P + Q L + Sbjct: 4 MFGPTITLGVEIASTAVRMVEVSRRNQRFAIVAALKQPFSPPAGEINSDAYYQALEAAIE 63 Query: 61 PWSRELPQR-HHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRF 119 L ++ +LAFP+ + R P M + E A L + + + + D + Sbjct: 64 KCLAGLRKKAKRAVLAFPSRHLISRQIRMPHMP--DDEMRASLRWELEKYVPLSADDYVY 121 Query: 120 DY-------SEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLP 172 DY E + A +E+ +R+ + V+A+ + AL R L + Sbjct: 122 DYLHQGVIDVEGDRMAQLLLVALPKEEVLRHHACLKRVGLTVTAVEISSFALSRLLNVMR 181 Query: 173 SH 174 Sbjct: 182 EK 183 >UniRef50_C1SLD1 Type IV pilus assembly protein PilM n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SLD1_9BACT Length = 340 Score = 113 bits (283), Expect = 5e-24, Method: Composition-based stats. Identities = 29/179 (16%), Positives = 59/179 (32%), Gaps = 8/179 (4%) Query: 4 KIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLP-W 62 G+ + V + + LP G + D LAK+L Sbjct: 2 SKLLTGVDIGASNIKIVGLKEKKDSFVVSSINILPTPAGAFSGGTVADTDVLAKSLSECV 61 Query: 63 SRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD-- 120 + I L+ + + + P G T + + + M + FD Sbjct: 62 KKCRGAEKDIALSLKGADVVVKRIALPWNGKGHF--TEQFLWSAEQYIGMSSERASFDAQ 119 Query: 121 ---YSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQ 176 Y ++ + + AA ++A +L LA + ++ + ++ AL + F Q+ Sbjct: 120 LLHYDRETQTADAVLAAASKVKVADMLDLASQSGLNPVVLDIESLALVNLVTFFKGPQK 178 >UniRef50_A4AFF7 Pilus-associated protein pilM n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AFF7_9ACTN Length = 346 Score = 112 bits (281), Expect = 9e-24, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 60/174 (34%), Gaps = 11/174 (6%) Query: 4 KIWQIGLHLQQQEAVAVAIV-RGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL-P 61 +GL + AV + + R+ +PL ++ G ++D+ + ++ Sbjct: 2 GKKLVGLDIGSTAIRAVEVENPQQPRPTILRFGEVPLPEGAVRAGEVIDSATVTASIRKL 61 Query: 62 WSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDY 121 W++ + ++L S+ L R P + L + ++ L + L + D+ Sbjct: 62 WTQSGIRTRDVVLGVGNSKVLARDIKVPRLPLNQVRES--LPFQVQDLLPVPATEALLDF 119 Query: 122 SEDSLSPAY-------NVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFL 168 S + + AA + + A V+ + AL R Sbjct: 120 YPASEADGETGPLLSGMLVAAIKAPVLVNVNAAIAAGVNPENVDLSPFALTRLF 173 >UniRef50_Q2B6I7 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B6I7_9BACI Length = 326 Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 58/176 (32%), Gaps = 7/176 (3%) Query: 2 AFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLP 61 K I + ++ + KE + R L N II++G+I DA+ L L Sbjct: 7 FGKNRVINITVKDHVVRMAELK-NNKEPHVLRSEERYLPNGIIREGKIQDAETLTAILEE 65 Query: 62 WSRE-LPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD 120 E + I P + R P E E +L + + + + FD Sbjct: 66 CVSEWKIKGKEIAFLVPDPVIIIRKLSIPQDVSAE-EIKGYLYMELGTSIHLPFEDPVFD 124 Query: 121 YSEDSLS----PAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLP 172 Y+ + AA + + +++ E R+ AL R L Sbjct: 125 YTILETGESGMKEILLFAAPEEIVHEYVSVFEEARLKPVLADISCLALYRLYYELD 180 >UniRef50_C1PAI3 Tfp pilus assembly protein ATPase PilM-like protein n=1 Tax=Bacillus coagulans 36D1 RepID=C1PAI3_BACCO Length = 333 Score = 112 bits (279), Expect = 2e-23, Method: Composition-based stats. Identities = 31/205 (15%), Positives = 65/205 (31%), Gaps = 14/205 (6%) Query: 12 LQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLA----KTLLPWSRELP 67 ++ + + + + + L +I+ G+I DA+ LA + L W L Sbjct: 18 IKDHVIRFLELRQT-DPPVVAKMGERYLPEGLIRGGKIADAETLAMIAEECLGDW--GLK 74 Query: 68 QRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSLS 127 +H + A P + + R P + E +++ + + + D FD++ S Sbjct: 75 GKHPVRFAVPDNFVVVRQIAVPDEIAMD-EMEGYITLELGSTIHLPFDDPVFDFALLGES 133 Query: 128 ---PAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPF---LPSHQQCLAWR 181 + AA + +R+ A R L + L + Sbjct: 134 NQEKQVLLFAAPRDVVEDYAGFFNDIRLSPVAADISPLCAYRSFYHLNTLNAMDHLLLLQ 193 Query: 182 DNEQWLWATRYSWGRKLAVGMTSAK 206 + + AT + L Sbjct: 194 FDLSMVNATIFHRHFPLLARELEVD 218 >UniRef50_B8I5K3 Type IV pilus assembly protein PilM n=2 Tax=Clostridium RepID=B8I5K3_CLOCE Length = 351 Score = 111 bits (278), Expect = 2e-23, Method: Composition-based stats. Identities = 28/173 (16%), Positives = 61/173 (35%), Gaps = 6/173 (3%) Query: 4 KIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL-PW 62 + + L + V+ K + + + + + DG I+D L+K + Sbjct: 3 RKNLLALDIGNDTIKVVSGSANKKNIVINEYGIVKTPAECVNDGMIIDTAVLSKVISEAV 62 Query: 63 SRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYS 122 +++ + + R P E+E L + +D D+ Sbjct: 63 KTHKIGGGALVMTVTGTGVITRDIVLPK--STEQEIEKMLEFEAQQYFPVDLKDYTVDFK 120 Query: 123 EDSL---SPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLP 172 V AA +K++ T + L + L+ ++AI ++ + + L F P Sbjct: 121 VMENMGDQIRVLVVAAPNKQIETYINLTKLLKQQLAAIDIPSNCVLKLLSFSP 173 >UniRef50_C7LNA3 Type IV pilus assembly protein PilM n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LNA3_DESBD Length = 350 Score = 110 bits (274), Expect = 6e-23, Method: Composition-based stats. Identities = 26/169 (15%), Positives = 58/169 (34%), Gaps = 13/169 (7%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL-PWSREL 66 +GL L + V I G + L+ R P + G + + AK + WS+ L Sbjct: 14 VGLDLGSEWLKMVKIRPGKGDFILESIARSPWQP-----GDLDNNSATAKKIAGLWSQLL 68 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDS- 125 + + + + + S + + + + D + + D+ Sbjct: 69 LKDQVVASSMAGHAVIVKRVTF--ESDSPKTLGDTVHKDARQYIPFDINDVYLDFQVLGP 126 Query: 126 ----LSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPF 170 S + A++ K + L + + + +S I D+ A+ + Sbjct: 127 GAKEKSYDVLLVASKKKVVQNLSDVITQSGLSLSVIDVDSFAICNSFEY 175 >UniRef50_A6CN92 Putative uncharacterized protein n=2 Tax=Bacillus RepID=A6CN92_9BACI Length = 320 Score = 109 bits (273), Expect = 9e-23, Method: Composition-based stats. Identities = 35/252 (13%), Positives = 82/252 (32%), Gaps = 14/252 (5%) Query: 1 MAFKIWQIG-LHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTL 59 + K ++ L + + + L + L +I DG+I++ L L Sbjct: 5 LFGKNKRVANLVITDTAIRYADLKMDSP-LILHNYGEKLLPQGVITDGKIIEYDTLVMIL 63 Query: 60 LPWSRELPQRHH-IMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLR 118 E + P++ + + P + E E ++ + + + + Sbjct: 64 EECISEWGITKRPVRFIVPSTSIIVKRVLVP-TDIKEDELKGYIFMEIGTSIHLPFEDPL 122 Query: 119 FDYSEDSLSP---AYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPF---LP 172 FD V A+ + + + + E +++ AL R+ + Sbjct: 123 FDVVLLGEKGDKQEILVVASPEEVIHSYRDILEEVKLKPMVADISPLALYRYFYHNDMVR 182 Query: 173 SHQQCLAWRDNEQWLWATRYSWGRKLAVGMTSAK---ELAAALSVDPESVAICGEGGF-D 228 S + + +E+ L + + + + + S + ELA L + E F + Sbjct: 183 STDHEMLLQFDEKLLTISIFHNNQPIFLRPISLQGDLELAEPLENQSGGLLFYLEDTFKE 242 Query: 229 PWEAVSVRQPPL 240 + S + L Sbjct: 243 IEKVFSFYKYSL 254 >UniRef50_C6IYF3 Predicted protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IYF3_9BACL Length = 319 Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 65/168 (38%), Gaps = 11/168 (6%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPW-SREL 66 IG+ + + V ++R LP++ ++ +DG + D + + W +R Sbjct: 18 IGITIDEDGIRFVKFDAKRG--IVERAGLLPVDAELNEDG-VPDVSGFTEMVKRWANRRG 74 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDY----- 121 + LA P S++ R P +S ++ + L + L + DY Sbjct: 75 LAGKKVRLAAPTSQSFIRLLQVPKVSKRQQRRVTELEIEGSIRLPF--EDPVIDYHWIEE 132 Query: 122 SEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLP 169 E+ + V A + +++ E+ + + A+ A AL R L Sbjct: 133 REEGEALLTFVAAVPRPIIQEMVSSLEQAGLRLEAVDLAAIALSRILR 180 >UniRef50_A4J3B1 Type IV pilus assembly protein PilM n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J3B1_DESRM Length = 343 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 18/166 (10%), Positives = 47/166 (28%), Gaps = 9/166 (5%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELP 67 + + V + + + +P ++G++ + + Sbjct: 16 TAVDIGTHSLKLVKVKDSQRVPIITTCASIPAPPS--REGKLAEQETAQAIGRLVEIAGI 73 Query: 68 QRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSLS 127 ++ A S+ + R P M ++ + A+ + + + L Y + Sbjct: 74 NDKKVITAIAGSKVITRQIKLPFM--EDKALADTVEAEAAKYIPLPVEDLIIRYVKLGRE 131 Query: 128 PA-----YNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFL 168 + AA + + + + AI A L R Sbjct: 132 GGTDLLNIMLIAAPISLVEQYYYIFLMAGLTIKAIDLQAFGLWRLF 177 >UniRef50_UPI0001743B82 type IV pilus assembly protein PilM n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI0001743B82 Length = 347 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 22/184 (11%), Positives = 62/184 (33%), Gaps = 10/184 (5%) Query: 10 LHLQQQEAVAVAIVRGAKE-CFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL-PWSRELP 67 L + + V + + L + ++ II ++L + + + Sbjct: 12 LDIGTKAIRVVQLTPQGDDSWSLLHAGYMAVDPKIIASDSDESRKKLGQAIKSAVVQAGI 71 Query: 68 QRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDS-- 125 + ++ +SR+ P M + E+++ L + + + D + D+ Sbjct: 72 SATNCVIGIESSRSFVTMIQLPKM--TDSERSSILKYQADKYIPIPVDDAKIDWVVLGDS 129 Query: 126 ----LSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLAWR 181 + + + L+ + + L +V A+ P++ ++ R S + Sbjct: 130 PDNPQQDEVMLASVTQDYIEGLVDMIDSLGFNVIAVEPNSISMLRAALAANSTSTNMVIN 189 Query: 182 DNEQ 185 E+ Sbjct: 190 VGER 193 >UniRef50_B6J4A0 Putative uncharacterized protein n=6 Tax=Coxiella burnetii RepID=B6J4A0_COXB1 Length = 264 Score = 107 bits (268), Expect = 3e-22, Method: Composition-based stats. Identities = 28/183 (15%), Positives = 66/183 (36%), Gaps = 20/183 (10%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 MA QIG+ ++ E AV + R ++ +P++ D+ Q L + Sbjct: 1 MASS--QIGIEIETHEIRAVKVRRREDCLHIEGRAIIPIKTDL--------TQALLELQT 50 Query: 61 PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGE-REQTAWLSGTMARELDMDPDSLRF 119 W P +++ + ++ P S + + L + + + + Sbjct: 51 QW----PGLAKAVVSLDYQKVFSKTIPFDSTLTKNGWQCS--LQHQLQSLFGLSAEEVYC 104 Query: 120 DYSED---SLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQ 176 DY P ++ A + E+ + + + ++ + A+ + A R + F+ + Sbjct: 105 DYYCLTTAQKPPTCHLFAVKKSEVDEITSACRKAKIRLIAVDINILACTRLIYFVNAKAD 164 Query: 177 CLA 179 A Sbjct: 165 IFA 167 >UniRef50_C7R4D8 Type IV pilus assembly protein PilM n=3 Tax=Micrococcineae RepID=C7R4D8_JONDD Length = 353 Score = 107 bits (268), Expect = 3e-22, Method: Composition-based stats. Identities = 30/180 (16%), Positives = 62/180 (34%), Gaps = 16/180 (8%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKEC-----FLQRWWRLPLENDIIKDGRIVDAQQL 55 MA + IGL + A + G+ L + +LPL +++DG +V+ ++ Sbjct: 1 MA-RTSTIGLDIGSTAVRAAQLEFGSGGPGSTPPTLSAYAQLPLPAGVMQDGVVVEPDKV 59 Query: 56 AKTLLP-WSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDP 114 A + W H +++ + R + +++ L L + Sbjct: 60 ASAVKALWQVGKFSAHDVVMGVGNQHVIVREADLAWQPMNVLKKS--LPYQAQDLLPVAS 117 Query: 115 DSLRFDYSEDSL-------SPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRF 167 FD+ + + AA ++ + AE V + + A+QR Sbjct: 118 GDAVFDFVPTGEFESEEGRRMSGLLVAAIRDMVSANVRAAEAGGVRPLMVDLNPLAIQRA 177 >UniRef50_B0VJ47 Putative type IV pilus biogenesis protein PilM n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VJ47_9BACT Length = 356 Score = 106 bits (265), Expect = 7e-22, Method: Composition-based stats. Identities = 24/215 (11%), Positives = 63/215 (29%), Gaps = 33/215 (15%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLP--------LENDIIKDGRIVDAQQLAKTL 59 +G+ + V + + + L + P + +D++ + L + L Sbjct: 13 VGIDIGTHSIKIVHLKKLHEGFKLLNYEISPTVATGTEYVPSDLLPERY---GPVLCEML 69 Query: 60 LPWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRF 119 + H++ + T + ++ L + E + L + + + + Sbjct: 70 NTLKINPKRIQHLVTSIGGDNTSIKQIK--TIFLPDEELESALFFEAKKHIPISGTDMIL 127 Query: 120 DYSEDS-----LSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQR-------- 166 DY S + + A + L + + + + D+ A+ Sbjct: 128 DYQVISLEEKTNNMNILLAATSKEVLNEHTNVLMTAGLAPNIVDIDSLAVVNSFILNTFV 187 Query: 167 ------FLPFLPSHQQCLAWRDNEQWLWATRYSWG 195 L + W + L+A +G Sbjct: 188 EDGVYILLNLGAHRTNMIIWGPGAK-LFARDIPYG 221 >UniRef50_B5WSN7 Putative uncharacterized protein n=10 Tax=Burkholderia RepID=B5WSN7_9BURK Length = 331 Score = 106 bits (265), Expect = 7e-22, Method: Composition-based stats. Identities = 33/187 (17%), Positives = 66/187 (35%), Gaps = 22/187 (11%) Query: 9 GLHLQQQEAVAVAIVRGAKEC---FLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRE 65 G+ + Q V + + ++ L+ ++PL + IVD Q +A+ L + Sbjct: 21 GIDVGSQNVRLVVLSQRSRAWGELHLEYMSKVPLAAGAMAGTEIVDRQAVARALRDAFAD 80 Query: 66 LPQRH-----HIMLAFPASRTLQRSFPRPSMSLGER-----------EQTAWLSGTMARE 109 LP+ +A PAS TL + P ++ + R Sbjct: 81 LPRVCAAHALRCAMAVPASATLTTTVPLARLAAQSDCAEEDGGVALAGLAPAVMSEAERI 140 Query: 110 LDMDPDSLRFDYSEDSLS---PAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQR 166 ++ +L D+ D + + + A + L + A + + AI + A R Sbjct: 141 AGLERHALAVDWYVDEIPSPVRSVRIAATARQHLEARIECAATAGISLCAIDGEPHAALR 200 Query: 167 FLPFLPS 173 + + S Sbjct: 201 AMRYAAS 207 >UniRef50_C0GNB8 Type IV pilus assembly protein PilM n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GNB8_9DELT Length = 354 Score = 106 bits (265), Expect = 7e-22, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 55/167 (32%), Gaps = 13/167 (7%) Query: 10 LHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL-PWSRELPQ 68 L L A V + R +E L R R+ + D Q + + W + + Sbjct: 19 LDLGSTWAKTVRLARKGREPQLDRVARI-----VWSAAEHKDFQSKGRRIKEAWGQLGLK 73 Query: 69 RHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDS--- 125 ++ + + + G+ E + ++ + + D + DY Sbjct: 74 DKSVISSLAGHSVIVKRVFLEKSDSGDLE--SKINEEAGQYIPFDISDVHLDYHILEPDP 131 Query: 126 --LSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPF 170 + + A + K + L + + + +S + DA AL F Sbjct: 132 ESENQEVILVATKKKVVQDLTQVMDHSGLGLSIVDVDAFALSNCFEF 178 >UniRef50_D2MKD1 Type IV pilus assembly protein PilM (Fragment) n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MKD1_9BACT Length = 194 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 24/168 (14%), Positives = 58/168 (34%), Gaps = 11/168 (6%) Query: 10 LHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSREL-PQ 68 + + + + + A L+R+ LE+D++++G + +L L RE Sbjct: 1 MDIGSSTIKLIELEQHAARYRLKRFGVRRLESDVVEEGASHHSHRLKAALRDLLREFELL 60 Query: 69 RHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSLSP 128 + ++ + + + + +L+ + + + FDY Sbjct: 61 GSPVAISVSGPSVMVKRIRVSGV--EQDALDEYLTWEGHQYIPHAMSDVCFDYWILPPPR 118 Query: 129 --------AYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFL 168 + AA+ + + + L E + VH D AL + + Sbjct: 119 PQSVSTETDLLLVAAKQQMVESRKALLEEIGVHPIVCDVDGLALMKTI 166 >UniRef50_A5GFB0 Tfp pilus assembly protein ATPase PilM-like protein n=3 Tax=Geobacter RepID=A5GFB0_GEOUR Length = 308 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 26/270 (9%), Positives = 62/270 (22%), Gaps = 15/270 (5%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDII----KDGRIVDAQQLA 56 M F +G+ + + + L + L D I ++ +++ Sbjct: 1 MLFPKKALGVEICSEGVKMALVEGRQNALRLDAYTASSLPADTIKFALREQNVLNPSVFV 60 Query: 57 KTLLP-WSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPD 115 + + R L + H+ ++ P + + E + + + + Sbjct: 61 NIIRETYLRLLTKTKHVSVSLPDTTGRVILLDLETRFKSRDEGADIIRWKLKKSFPFNIS 120 Query: 116 SLRFDYSEDSLSP----AYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFL--P 169 DY + V+ + + L + + I L R Sbjct: 121 DAHLDYQLLEEKDSGEISLLVSIIARQVVNQYEDLFVEAGLEPNCIDFTTFNLYRLFSGR 180 Query: 170 FLPSHQQCLAWRDNEQWLWATRYSWGRKLAVGMTSAKELAAALSVDPES---VAICGEGG 226 S + + G ++ + + Sbjct: 181 LSISENAAFMTFYG-GMVTILVFYAGVLSFYRSKEIPGGTLEINRAYREINSSLLVYQDM 239 Query: 227 FDPWEAVSVRQPPLPPPGGDFAIALGLALG 256 V F +G A G Sbjct: 240 HPSHTINEVFCVATGDDAEAFRAIVGEATG 269 >UniRef50_D2LRV4 Tfp pilus assembly protein ATPase PilM-like protein n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LRV4_BACS4 Length = 323 Score = 103 bits (258), Expect = 4e-21, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 71/216 (32%), Gaps = 17/216 (7%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLP-WSREL 66 +G+H++ V++ RG+ ++ + L +I+ G+IV A + +L + Sbjct: 10 VGIHIKDHVIRFVSM-RGSSLANVESFGEKYLPKGVIEKGKIVQADVFEEMMLDCVKKWN 68 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDS- 125 + +M P S R P+ + E E +L+ + + + D FDY Sbjct: 69 LKNKEVMFFVPDSSVFFRKLSIPA-DIKEEEIRGYLNFEIGASIHLPFDEAYFDYHVLET 127 Query: 126 ----LSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLAWR 181 A + E +++ A +L RF Sbjct: 128 NEADEKRQILFFATPELLIKDYAKRLESVKLKPIAADISGLSLYRFFQQNSE------AG 181 Query: 182 DNEQWLWATRYSWGRKLAVGMTSAKELAAALSVDPE 217 D + +L+ W ++ + P+ Sbjct: 182 DRDHFLFI---EWDVTSINLSIFHDDIPVFMRHIPQ 214 >UniRef50_A9M1V0 Type IV pilus assembly protein PilM n=27 Tax=Neisseria RepID=A9M1V0_NEIM0 Length = 371 Score = 103 bits (258), Expect = 5e-21, Method: Composition-based stats. Identities = 27/175 (15%), Positives = 61/175 (34%), Gaps = 6/175 (3%) Query: 8 IGLHLQQQEAVAVAIVRGA-KECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSREL 66 IG+ + Q V + + + L+++ L +II+ ++ + QL L +L Sbjct: 30 IGIDIDQHSIKMVQLSGRSLNQIQLEKYVIAKLPKNIIQGNKVQNYDQLVTYLQQAYAKL 89 Query: 67 PQRHH-IMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDS 125 I+ + P + E + ++ +++ + + +DY S Sbjct: 90 GTSCKNIIASVPQNLATIEQLTYTD-KDAELDLQGFVESSISEVSSISLEEANYDYQVLS 148 Query: 126 LSPA---YNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQC 177 S A A++ E+ L+ + +SA+ D +H Sbjct: 149 QSAAGEAVLAVASRKDEIEPLIDAFNAAGMKLSALDVDIFGQYNAYALWINHFAP 203 >UniRef50_A5FPX8 Tfp pilus assembly protein ATPase PilM-like protein n=4 Tax=Dehalococcoides RepID=A5FPX8_DEHSB Length = 485 Score = 103 bits (257), Expect = 6e-21, Method: Composition-based stats. Identities = 22/163 (13%), Positives = 55/163 (33%), Gaps = 10/163 (6%) Query: 12 LQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPW-SRELPQRH 70 ++ E + +++W PLE ++ DG I D ++++ + SRE Sbjct: 9 IEDAEIKVLV----NNGKKIEKWASSPLETGLVIDGLIQDETKVSEAIKTLFSREKIPAG 64 Query: 71 HIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSLSPA- 129 ++ A +++ R P++ + + R + D Y + + Sbjct: 65 RVVAAMSGLKSIFRIVTLPAVP--KNILDEAIKNEANRVIPTPMDQNYLSYQILPSAQSE 122 Query: 130 --YNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPF 170 + A +++ + + + + AL R Sbjct: 123 TKVFIVAHPKNTTDSVVRTINKAGLRLEVLDIAPLALCRCANL 165 >UniRef50_B6SE76 PilM n=2 Tax=Kingella RepID=B6SE76_9NEIS Length = 367 Score = 103 bits (257), Expect = 7e-21, Method: Composition-based stats. Identities = 35/229 (15%), Positives = 82/229 (35%), Gaps = 16/229 (6%) Query: 3 FKIWQIGLHLQQQEAVAVAIVRGA-KECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLP 61 IGL + Q V + + + L+++ + L +++I +VD +QL L Sbjct: 19 SGRSVIGLDIGQGGIRMVQLSGRSLSQVQLEKYAMVTLPSNVISGTEVVDFEQLVSHLQQ 78 Query: 62 WSRELPQRHH-IMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD 120 +L + ++ P S R + E + ++R DS+ +D Sbjct: 79 CYSKLKTNCKQVNISLPTSSVTIEDDVRFNPEESEISLQEMVESEVSRVG--ALDSMNYD 136 Query: 121 YSEDSLSP-----AYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLP--- 172 + E S + V AA+++++ L + + + + + D A+ + Sbjct: 137 WYEMSQNAKTGEQRILVVAAKTEDVDRCSDLLDEIGLQATNVDVDLFAIANAFAYADQGE 196 Query: 173 --SHQQCLAWRDNEQWLWATRYSWGRKLAVGMTS--AKELAAALSVDPE 217 + + L + + A G L + ++L + + + Sbjct: 197 QFADSKVLLVDVGDVNMRALVVEKGTILFRHESHLGLEQLVQLVQRNYQ 245 >UniRef50_B9XEZ8 Type IV pilus assembly protein PilM n=1 Tax=bacterium Ellin514 RepID=B9XEZ8_9BACT Length = 639 Score = 102 bits (254), Expect = 1e-20, Method: Composition-based stats. Identities = 19/176 (10%), Positives = 47/176 (26%), Gaps = 10/176 (5%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGA-KECFLQRWWRLPLENDIIKDGRIVDAQQLAKTL 59 M + + L+++ PL + + K L Sbjct: 1 MLNSKSFLTVDFGAGSLKLAEFEINEAGGLRLKQYGLKPL--GLEGSKEETREAAMLKAL 58 Query: 60 LPWSRE-LPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLR 118 E + + + P + P + + Q + + + + Sbjct: 59 QEVLAEKGIKAKDVNVCAPGFHVFSKFVKLPPVDTSKVTQI--IQYEAQQNVPFPLSEVV 116 Query: 119 FDYSEDSLSP----AYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPF 170 +DY S + A +S+ + L + E+ + + +AL + Sbjct: 117 WDYQILGSSASGELEVLLVAIKSEIVEGLFRVTEKAGLRLQLADVSPAALCNAFRY 172 >UniRef50_B5YDZ3 Putative uncharacterized protein n=2 Tax=Dictyoglomus RepID=B5YDZ3_DICT6 Length = 329 Score = 100 bits (250), Expect = 4e-20, Method: Composition-based stats. Identities = 24/154 (15%), Positives = 58/154 (37%), Gaps = 10/154 (6%) Query: 23 VRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELP-QRHHIMLAFPASRT 81 R K+ ++ + L ++I+ G++ + L + L + + +++ PA Sbjct: 26 KRKDKKVVIKNFALETLPPEVIQGGQLNNPDYLLEVLKGILKRFKVKSGKTLISIPAQNV 85 Query: 82 LQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSE-------DSLSPAYNVTA 134 + R F P M E E + + R + + P+ + +D D+ + A Sbjct: 86 VVRFFNFPYMP--ENELRESIKWELERYIPLSPEDVNYDIQVVDVVDKGDTKESRIMLVA 143 Query: 135 AQSKELATLLTLAERLRVHVSAITPDASALQRFL 168 + L L + ++L + + + R + Sbjct: 144 VSKEILNPYLDVIKKLNLEPELVDVSVFSAVRMM 177 >UniRef50_B1I3B3 Type IV pilus assembly protein PilM n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I3B3_DESAP Length = 361 Score = 100 bits (249), Expect = 6e-20, Method: Composition-based stats. Identities = 28/169 (16%), Positives = 51/169 (30%), Gaps = 10/169 (5%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDG-RIVDAQQLAKTLLPWSREL 66 G+ L E V + + +P + G + + L + Sbjct: 19 TGVDLGTHEIKVVRMAHNGNRPVVLGCASVPAPSGAQPGGPNRPEMAAALEEALQAAGAA 78 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL 126 + ++ A R + R+ P M ERE A + R + + PD L + Sbjct: 79 EGANGLVTAIGGGRVIARNILLPVMP--EREFEAAVRWEAERHIPVPPDELVIRHVRLGE 136 Query: 127 -------SPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFL 168 + A K + TL ++A+ + AL R Sbjct: 137 VVTDGVAQFHVLLVGAPRKLVQDYDTLFRETGRVLNAVDLQSLALWRLF 185 >UniRef50_B2T709 Putative uncharacterized protein n=5 Tax=Burkholderia RepID=B2T709_BURPP Length = 330 Score = 98.1 bits (243), Expect = 2e-19, Method: Composition-based stats. Identities = 30/186 (16%), Positives = 62/186 (33%), Gaps = 21/186 (11%) Query: 9 GLHLQQQEAVAVAIVRG---AKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRE 65 G+ + Q V + + ++ +PL + I D +A+ L + Sbjct: 21 GIDVGSQTVRLVVLSQRARSRGALHIEYASTVPLVAGAMAGSEIADRHAVARALRDAFAD 80 Query: 66 LPQRH-----HIMLAFPASRTLQRSFPRPSMSLGE----------REQTAWLSGTMAREL 110 LP +A PAS T+ + P ++ E + + R Sbjct: 81 LPHACATQALRCAMALPASATMTTTVPLTRLAAQSGCSEDGGHQLAELEPAVMSEVERIA 140 Query: 111 DMDPDSLRFDYSEDSL---SPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRF 167 ++ +L D+ D + + A + L + A + ++AI + A R Sbjct: 141 GLERHALAVDWYLDEAYAPVRSVTIAATARQHLEARIECAAIAGISLTAIDGEPHAALRA 200 Query: 168 LPFLPS 173 + + S Sbjct: 201 MRYAAS 206 >UniRef50_UPI00016B26A1 type IV pilus assembly protein PilM n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B26A1 Length = 303 Score = 97.0 bits (240), Expect = 6e-19, Method: Composition-based stats. Identities = 29/189 (15%), Positives = 66/189 (34%), Gaps = 12/189 (6%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 + IGL + + +AI + + + + N+ + L L Sbjct: 5 LYKDKALIGLDISTSDIKVMAINNKKD---VIGYGAIDISNEKFHKSLEENDDYLLLQLK 61 Query: 61 PWSRELPQRH----HIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDS 116 E H + ++ P S+T R+F P+ + + + +++ + + S Sbjct: 62 KLFSEKIHGHLPSPQVAVSIPTSKTYSRTFSVPASTKKNLREA--IELEISQYIPIPVTS 119 Query: 117 LRFDYSED---SLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPS 173 L DY + V+AA + ++ R+ + V+ + P +++ R L + Sbjct: 120 LYVDYEIISESEENINVLVSAAPRLLIDKIVDACSRVNLTVNLVEPGINSIARLLRDIEE 179 Query: 174 HQQCLAWRD 182 D Sbjct: 180 GDLPTVIVD 188 >UniRef50_A3DD62 Type IV pilus assembly protein PilM n=9 Tax=Clostridium thermocellum RepID=A3DD62_CLOTH Length = 368 Score = 96.6 bits (239), Expect = 7e-19, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 62/168 (36%), Gaps = 11/168 (6%) Query: 10 LHLQQQEAVAVAIV-RGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELP- 67 + + + V + + F++ + +P D IK+G I D ++ + RE Sbjct: 15 IDVGYRNIKVVEVAVKKNNNIFIENYGIVPTPPDCIKNGAIYDVDRVLSVIKSVIREQNM 74 Query: 68 QRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDS-- 125 + + + + + R GE E + +M + L +D D+ R DY Sbjct: 75 KAKNAKIIMSGTNIITR-IYLIDKVQGESE-DFTVKNSMPQFLPIDIDNYRVDYKILQTI 132 Query: 126 -----LSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFL 168 VTA L + + + + L + A+ A++ +F Sbjct: 133 KEKGSEKYKVFVTAVPKNILQSYVDVLQGLDLKPLAVDIPANSTAKFF 180 >UniRef50_B4D6S1 Type IV pilus assembly protein PilM n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6S1_9BACT Length = 579 Score = 95.4 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 24/176 (13%), Positives = 52/176 (29%), Gaps = 10/176 (5%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIV-RGAKECFLQRWW-RLPLENDIIKDGRIVDAQQLAKT 58 MA + L L Q L + R L + R+ + + Sbjct: 1 MAASTRILSLSLGTQTIGLAEFKTGQNGGLILSAYETRELLADPAADATRLAQTKLVLDE 60 Query: 59 LLPWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLR 118 + + + + A + R PS+ GE + + + + D + Sbjct: 61 I--VQKRKLKGGKVNYAVSSQSVFTRFVKLPSV--GEEQVDQIVGFEAQQNVPYPIDEVV 116 Query: 119 FDYSE----DSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPF 170 +DY D+ + A ++ L + E+ + + + AL + Sbjct: 117 WDYQLVDSGDASQVEVVIVAVKADLLDDINDSVEQTGLKTTLVDVAPMALYNAFRY 172 >UniRef50_B1XUD2 Fimbrial assembly family protein n=1 Tax=Polynucleobacter necessarius subsp. necessarius STIR1 RepID=B1XUD2_POLNS Length = 571 Score = 94.7 bits (234), Expect = 3e-18, Method: Composition-based stats. Identities = 25/251 (9%), Positives = 72/251 (28%), Gaps = 22/251 (8%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWS-REL 66 +G+ + + L++ + + D + L Sbjct: 27 VGVDITPNYIRVAQLSENPDGWLLEKMGFKQVADGATLDDVRDSQDDYVQKLRELIITAN 86 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMA----RELDMDPDSLRFDYS 122 + + ++ P + + R+ P MS + E + + +L+ + + Sbjct: 87 LETANAAISIPITSAIVRTVTMPLMS--DEEIESTIQYDSLWNNILQLEEKLEEYSIFWQ 144 Query: 123 ED-----SLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPF----LPS 173 + A++ E+ + +A R ++ + A++ L Sbjct: 145 VIRRNTAENTMELLFVASKLSEINQYVQIATRAGLNSVVVDVRCFAIRNALKAQKGGAQG 204 Query: 174 HQQCLAWRDNEQWLWA----TRYSWGRKLAVGMTSAKELAAALSVDPESVAICGEGGFDP 229 + + NE ++ T + + ++ + E + + C G Sbjct: 205 TTALIEFGPNENYVLIVTDDTPFIYDIYISEADCALIESGQLEGEQGDRLYDCFAG--QV 262 Query: 230 WEAVSVRQPPL 240 +A + L Sbjct: 263 LQAFRAYEIKL 273 >UniRef50_C8WIS0 Tfp pilus assembly protein ATPase PilM-like protein n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WIS0_EGGLE Length = 331 Score = 93.5 bits (231), Expect = 7e-18, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 52/174 (29%), Gaps = 16/174 (9%) Query: 4 KIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWS 63 G+ + + + + L ++ DGRIV +A + Sbjct: 2 GKTYTGVDIGDSSIKLAV----SDGQSVSKVAIEMLPEGLVADGRIVSHDAMADFIKSVV 57 Query: 64 RELPQ-RHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYS 122 R + + P+S +L R P+M+ E L + D +DY+ Sbjct: 58 RSIGGVSKDVAFVVPSSDSLFRRLSLPAMTEKELRLN--LPYEFRDYISQGKDRYVYDYA 115 Query: 123 EDS---------LSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRF 167 AA + +A + R + + P+ +A Q Sbjct: 116 MLGMRNDADGQPEGMDLLAVAAPKQAIADYTEMFRRAGLKLKVALPEQAAYQNL 169 >UniRef50_A5WCG0 Tfp pilus assembly protein ATPase PilM-like protein n=1 Tax=Psychrobacter sp. PRwf-1 RepID=A5WCG0_PSYWF Length = 332 Score = 92.4 bits (228), Expect = 1e-17, Method: Composition-based stats. Identities = 15/117 (12%), Positives = 34/117 (29%), Gaps = 7/117 (5%) Query: 64 RELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSE 123 R Q +A P S L + P+ L E E A + + + + D+ Sbjct: 2 RIGSQSKQAAIALPTSLALTKIIEMPAE-LTEDEIEAQIHIDADQHIPYPLSQVCLDFQI 60 Query: 124 DSLSP------AYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSH 174 + + AA+ + + ++ + ++ A + Sbjct: 61 QGPADTDDSMQQVLLVAARLEHVEQQADSLTFAQLQPKVVDLESHAQICAFQLAWDN 117 >UniRef50_C8NAT6 Putative uncharacterized protein n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NAT6_9GAMM Length = 345 Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 24/174 (13%), Positives = 48/174 (27%), Gaps = 6/174 (3%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 M K IG+ + Q I + K + ++ V ++ Sbjct: 1 MLGKPEIIGVDIGQYSIKVAQIKQSGKAFTANHLAYEVIPPEVRLQRDRVTLSKIVAA-- 58 Query: 61 PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD 120 ++ + ++L + R SL E + + + D + FD Sbjct: 59 TLKKQKVNKGQVVLHVNTGDVIMREVNV-DASLRGNELEGAIELELNDAIPFGMDQVYFD 117 Query: 121 YSEDSLSPAYNV-TAAQSKELATLLTLAERL--RVHVSAITPDASALQRFLPFL 171 + E + + L L + DA A R L ++ Sbjct: 118 FDEVPSKKGTRLAVVVRRDVADEKTALLNNLPKTFSKPQVDVDAFAFTRVLKYV 171 >UniRef50_Q0SQR2 Type IV pilus assembly protein PilM n=9 Tax=Clostridium perfringens RepID=Q0SQR2_CLOPS Length = 371 Score = 91.2 bits (225), Expect = 3e-17, Method: Composition-based stats. Identities = 18/178 (10%), Positives = 58/178 (32%), Gaps = 10/178 (5%) Query: 5 IWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSR 64 I + + + + + + + D I DG I D LA+ + Sbjct: 34 KKAISIDIGSNNTKIIVGRYHKNKVIIDKAFSFNTPKDSIDDGHIKDIDSLARAITDALD 93 Query: 65 ELP-QRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSE 123 + +++ ++ + R+ P ++ E E + + + + L ++ + Y+ Sbjct: 94 SNNVKNDNVIFTTNSTSVINRTIIIPRVN--EDEIESVIKYEVQQYLPINLEDHMIQYNV 151 Query: 124 DSLSP-------AYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSH 174 + +K + + L ++ A+ + ++ ++ + Sbjct: 152 LEEKVIDGNEKLEVLIVVYPNKMVYSYAELVNKIGGKPYALDLNYNSKRKAYYVMNPE 209 >UniRef50_UPI0001743286 hypothetical protein cdivTM_12464 n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI0001743286 Length = 171 Score = 90.8 bits (224), Expect = 4e-17, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 59/166 (35%), Gaps = 12/166 (7%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 + IGL + + +AI + + + + N+ + L L Sbjct: 5 LYKDKALIGLDISTSDIKVMAINNKKD---VIGYGAIDISNEKFHKSLEENDDYLLLQLK 61 Query: 61 PWSRELPQRH----HIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDS 116 E H + ++ P S+T R+F P+ + + + +++ + + S Sbjct: 62 KLFSEKIHGHLPSPQVAVSIPTSKTYSRTFSVPASTKKNLREA--IELEISQYIPIPVTS 119 Query: 117 LRFDYSED---SLSPAYNVTAAQSKELATLLTLAERLRVHVSAITP 159 L DY + V+AA + ++ R+ + V+ + P Sbjct: 120 LYVDYEIISESEENINVLVSAAPRLLIDKIVDACSRVNLTVNLVEP 165 >UniRef50_A6DSU3 Type IV pilus biogenesis protein PilM n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DSU3_9BACT Length = 591 Score = 90.4 bits (223), Expect = 5e-17, Method: Composition-based stats. Identities = 20/175 (11%), Positives = 53/175 (30%), Gaps = 9/175 (5%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 MA + + + + K L+R+ + + L TL Sbjct: 1 MASES-VVTIDVGASSVKLGEFKVDHKVITLERFGHREYDE---VQTESNRSALLKSTLS 56 Query: 61 PWSRELP-QRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRF 119 +E Q ++ A + P + ++ + + + + + + + Sbjct: 57 KVMQERGVQAKKAYISLSAQMAFTKFVKLPPVGDDAQKIRQVVEFEARQNVPFEMNEVIW 116 Query: 120 DYS----EDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPF 170 DY D+ A +++ + L++ E + V + S+ + Sbjct: 117 DYQLISSPDAEEVEVMFVAIKNEIVEELVSAVEECGLKVEIVDIATSSSYNAIRV 171 >UniRef50_C8X4Z0 Type IV pilus assembly protein PilM n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X4Z0_DESRD Length = 325 Score = 90.0 bits (222), Expect = 7e-17, Method: Composition-based stats. Identities = 21/154 (13%), Positives = 50/154 (32%), Gaps = 14/154 (9%) Query: 24 RGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELPQRHHIMLA-FPASRTL 82 G L+R R+P +D DA+ + L + L + ++ + + Sbjct: 3 PGKAGPQLERLGRVPWPR---QDNEATDAKA--ERLRQLWQALELKDKVVTSSMAGHAVI 57 Query: 83 QRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSLSPA------YNVTAAQ 136 + + A + + + D + + D+ + + A++ Sbjct: 58 VKRVRFAKDRIRH--LAAEVQKEAKQYIPFDINDVYLDFQDLGPESEQAGFHQVLLVASK 115 Query: 137 SKELATLLTLAERLRVHVSAITPDASALQRFLPF 170 K + + + + +S + DA AL F Sbjct: 116 KKMVHEVQNVLSAAGLGLSVLDVDAFALTNCFTF 149 >UniRef50_B2A558 Tfp pilus assembly protein ATPase PilM-like protein n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A558_NATTJ Length = 323 Score = 89.3 bits (220), Expect = 1e-16, Method: Composition-based stats. Identities = 21/175 (12%), Positives = 68/175 (38%), Gaps = 5/175 (2%) Query: 3 FKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPW 62 F IG++ V + + + ++ + +++ +D ++ + + Sbjct: 10 FDQNAIGVNFDSHGLKIVQLGKRGNKIICKKIEDINIQDQGNQDTVDFLQSRIDRLREYF 69 Query: 63 SRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYS 122 + I A + + ++ P+MS + + + + +L + D++ D+ Sbjct: 70 VANSLTKKQIYFAIKSKDIIIKTIQLPNMSKKD--IDSAIKLRIETQLILPWDNVVVDWF 127 Query: 123 EDSL---SPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSH 174 + + + AAQ +++ + + + +SA+ D ++ R + + S+ Sbjct: 128 ILNRSETNTKVLIVAAQKEQINDYCRVFKDAGLIISALEVDVFSILRMVNYTYSN 182 >UniRef50_A5KTJ9 Cell division protein FtsA n=3 Tax=candidate division TM7 RepID=A5KTJ9_9BACT Length = 351 Score = 89.3 bits (220), Expect = 1e-16, Method: Composition-based stats. Identities = 32/183 (17%), Positives = 62/183 (33%), Gaps = 12/183 (6%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDG-RIVDAQQLAKTLLPWSREL 66 +GL Q A++I + + + L+ +++ + L+ +L +E Sbjct: 12 VGLDFSQTSLKAMSIDPKR--VSVLGYGSIDLDPARVQEALETGNPAYLSSSLSTLLQEK 69 Query: 67 ----PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYS 122 +H +++ P RT RSF P E + + + + L DY Sbjct: 70 LIGKISSNHAVMSIPTPRTYTRSFTLP--LDAEGHLHDAIVLEAEQYIPVPLSQLYTDYE 127 Query: 123 EDSLSP---AYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLA 179 S + + A + + A ++ + V I P SA+ R L Sbjct: 128 IIERSKDKISVLLCAVPQRIVDVCTAAARKVGLRVVMIEPSISAVARLLTHTEEGHLPTV 187 Query: 180 WRD 182 D Sbjct: 188 IVD 190 >UniRef50_C1ZC69 Type IV pilus assembly protein PilM n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZC69_PLALI Length = 749 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 22/179 (12%), Positives = 60/179 (33%), Gaps = 13/179 (7%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQL-AKTL 59 MA G+ + Q A+ + + + + + D +L ++ L Sbjct: 1 MAELKSAWGIEIGQAGLKAIKLRYAEASNQVFAVAFDYVPHPKLLSQPDADPDELISEAL 60 Query: 60 LP-WSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLR 118 SR Q + ++ P S++L + P + E + + +++ + + Sbjct: 61 KTFLSRNQIQGDLLGISLPGSKSLLKFIQLP--PVEESKVAEIVRYEARQQIPFPLEDVI 118 Query: 119 FDYSEDSLS---------PAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFL 168 +D+ S + A + ++ + + ++ + + A+ FL Sbjct: 119 WDFQPMGSSSVEGGFMLDAEVGLFAMKRDDIEHQMYPFNQRKLELELVQIAPLAVYNFL 177 >UniRef50_UPI0001C4213B Tfp pilus assembly protein, ATPase PilM n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C4213B Length = 326 Score = 88.5 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 22/161 (13%), Positives = 48/161 (29%), Gaps = 6/161 (3%) Query: 12 LQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRE-LPQRH 70 ++ + + + + L I+ +G+I D L E +R Sbjct: 16 IKDHVIRYIG-SKQPDLLQITQIKERYLPLGIVVNGQIEDMTTFVTILTECVEEWKLKRQ 74 Query: 71 HIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDS---LS 127 I P T+ R+ ++ + E L + L + D FD+ Sbjct: 75 RIQFCLPQQHTIIRT-HFIDGTIPDEEVKGQLYLDLGESLLLPFDDPIFDFKVIGMHDGQ 133 Query: 128 PAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFL 168 + A++ L + + + +A + R Sbjct: 134 KEVLLFASRESVLNQYIDAFSEVHLKPNAADLSTLSAYRLF 174 >UniRef50_Q2RI85 Pilus-associated protein pilM n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RI85_MOOTA Length = 300 Score = 87.7 bits (216), Expect = 4e-16, Method: Composition-based stats. Identities = 33/238 (13%), Positives = 64/238 (26%), Gaps = 25/238 (10%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 + + +G+ L L +P + D + + A Sbjct: 5 LFKRRHYLGVDLGATAIRTAVYRGR----ELLT-ATVPAPPGGLNDPQALVAALAEAA-- 57 Query: 61 PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD 120 SR + A R + R P M+ E A ++ + L + D Sbjct: 58 --SRTGWHGRQAVTAITGERVVVRYLRLPQMA--PAELKAGMAYELENYLPTGARDMVVD 113 Query: 121 YSEDS-------LSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPS 173 ++ + AA +++ L + + + + AI AL R L S Sbjct: 114 WTILDDRSGRNNNQMPVLLAAAPREQVTQLYNIFQGAGLDLVAIDLVPLALCRALAATIS 173 Query: 174 HQQCLAWRDNEQWLWATRYSWGRKLAVGMTSAKELAAALSVDPESVAICGEGGFDPWE 231 ++W G+ L + A + + I G Sbjct: 174 -GAVTLLDIGDRWSHLVLTRSGQPLF------SRVIAMGAGELARPGIAGTSRLSELT 224 >UniRef50_B0K9B9 Tfp pilus assembly protein ATPase PilM-like protein n=10 Tax=Thermoanaerobacteraceae RepID=B0K9B9_THEP3 Length = 319 Score = 87.4 bits (215), Expect = 4e-16, Method: Composition-based stats. Identities = 26/172 (15%), Positives = 64/172 (37%), Gaps = 12/172 (6%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLP-WSREL 66 +G+ + + + K + + +++I +G+I+D LA + R Sbjct: 2 LGIEIGNFNTKLLIGEKKNKFFG--KRLMINTPSNVITNGKIIDINSLADVINETLKRNN 59 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDS- 125 + + +S + R P M E E L + + + +D ++ DY Sbjct: 60 IKEKQVCFTISSSNNIIRDLELPLM--KEDEVEKALYYEIEQYI-LDTENYVIDYRYLPN 116 Query: 126 -----LSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLP 172 + + ++ + + LAE L++ V AI ++++ + + Sbjct: 117 IAEKNKTIRVLIASSPKDIIEKYVKLAEMLKLKVEAIDIYSNSIYKACKKVN 168 >UniRef50_C4Z597 Type IV pilus assembly protein PilM n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z597_EUBE2 Length = 542 Score = 87.4 bits (215), Expect = 5e-16, Method: Composition-based stats. Identities = 22/204 (10%), Positives = 63/204 (30%), Gaps = 10/204 (4%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLP-WSREL 66 + + + + I + K + + +P +DG ++D L+KT+ Sbjct: 19 VSIVINNEYIKICEITKSGKNSTVHKTVTIPAPEGCYEDGILIDIDTLSKTIKGVLVEHR 78 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL 126 + + + + R + P++ + E+ + ++ D ++ Sbjct: 79 FNSNSVAFSISSPRLATKEVLIPNVKANKIEKI--VQANATEYFPVNMDEYIIQHTVLQE 136 Query: 127 -------SPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLA 179 V A S+ + + LA+ L + V+ + ++ + + + L Sbjct: 137 IEDQGQKKLKIMVAAVPSEVVESYYDLAKALGLKVAFVDYAGNSTYQIMKQQIGEEVSLV 196 Query: 180 WRDNEQWLWATRYSWGRKLAVGMT 203 + + M Sbjct: 197 IQVENDGTVINIFKENVLQLQRMV 220 >UniRef50_C1ZJR3 Tfp pilus assembly protein, ATPase PilM n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZJR3_PLALI Length = 415 Score = 87.0 bits (214), Expect = 5e-16, Method: Composition-based stats. Identities = 30/174 (17%), Positives = 56/174 (32%), Gaps = 14/174 (8%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPW-SREL 66 +GL LQ A+ + R + L + D + + + L W L Sbjct: 12 VGLLLQAGSVRAIQLDRSG---RVCGAAVENLASQT-SDSPLDYERAVIAILKRWWRNRL 67 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRF------D 120 + ++L P+ + P + E Q A L D D Sbjct: 68 FRGWQVVLGIPSHELWIHNARLPQVPSEELPQVA--RFEAEERLPYAVDEAELRLIVAGD 125 Query: 121 YSEDSLSP-AYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPS 173 +D +S + A + + + + E + AI ++ AL RF + + Sbjct: 126 VKQDGVSKHEVILLACRKTAIQQQIQICEHAGLVPQAIDTESHALIRFQRAVDN 179 >UniRef50_A5D349 Tfp pilus assembly protein, ATPase PilM n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D349_PELTS Length = 302 Score = 87.0 bits (214), Expect = 6e-16, Method: Composition-based stats. Identities = 28/172 (16%), Positives = 53/172 (30%), Gaps = 13/172 (7%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL-PWSREL 66 + L V + + LQ W LP++ I+ D + + LAK + Sbjct: 12 TAVALGADCIRVVELAVRGRSQDLQAWSSLPVDPGIMTDPD-KNKEGLAKLIRKAVELAG 70 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELD-------MDPDSLRF 119 + + ++ A P R + P M L E + + R M + Sbjct: 71 AEGNRVVSALPHGRVITVVVDMPKMPL--DELSQAVKWEAFRRFPESGRAGEMVLRHVVL 128 Query: 120 DYSEDSLSPA--YNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLP 169 D + + A+ + +L + + A+ AL R Sbjct: 129 DELNNGRQKQFRVLLALARESFIRAYYSLFSLAGLDLIALELQGLALWRVFR 180 >UniRef50_A8PP58 Putative uncharacterized protein n=1 Tax=Rickettsiella grylli RepID=A8PP58_9COXI Length = 313 Score = 87.0 bits (214), Expect = 6e-16, Method: Composition-based stats. Identities = 23/170 (13%), Positives = 50/170 (29%), Gaps = 16/170 (9%) Query: 4 KIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWS 63 IGL + + V + + L+ + + I ++A L Sbjct: 14 PQETIGLDIGSRMIKWVCLD---ENHVLKHYAIHAIPFPITAA---HREAKMASCLKETL 67 Query: 64 RELPQRHHIMLAFPASRTLQR--SFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDY 121 E + +L P S PS + + + + + L FDY Sbjct: 68 LEREFIKNCILNIPDSLIFSYWVEIDYPSSQT----IHEVIEWLVGKSILCPVNELYFDY 123 Query: 122 SE----DSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRF 167 + A + + L + + + + + ++ AL+R Sbjct: 124 QIFDLSHQNQCNVLIVACRKEHLDFRVNIVHEAHLIPTVVEVNSHALERA 173 >UniRef50_A7A8R7 Putative uncharacterized protein n=3 Tax=Bifidobacterium RepID=A7A8R7_BIFAD Length = 349 Score = 86.6 bits (213), Expect = 7e-16, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 56/172 (32%), Gaps = 14/172 (8%) Query: 8 IGLHLQQQEAVAVAIV-RGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSR-- 64 L + A I ++ + LPL + DG +VDA+ + L + Sbjct: 5 TALSIASDAIRAAVIADPYTDSPTIKHFQALPLPVGAVVDGEVVDAEVVTGLLKTLVQRF 64 Query: 65 ELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSED 124 + P+ + I L + + R + R P MSL + + L + + + D+ Sbjct: 65 KFPRENTI-LVYSSRRMVFRETDFPYMSLADLR--STLPFQAKGMIPLPIEESELDFVPL 121 Query: 125 --------SLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFL 168 + A L AE +++I AL R Sbjct: 122 SVVDDEQNGKQLHGILVATLRGGLEKTAYTAEEAGFVITSIDAGPFALARLF 173 >UniRef50_Q3AED9 Type IV pilus assembly protein PilM n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AED9_CARHZ Length = 343 Score = 86.6 bits (213), Expect = 7e-16, Method: Composition-based stats. Identities = 25/175 (14%), Positives = 55/175 (31%), Gaps = 14/175 (8%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 M + + + AV + K+ L + + + ++ + D + K LL Sbjct: 1 MGKNRYILAFDAGVRYFKAVLLKADKKQPELLKTVTYQMPVE-FQENTVRDY--IPKYLL 57 Query: 61 PWSREL-PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRF 119 +E + ++ P ++ + R P M+ E A+L + L + Sbjct: 58 AAKKEFNIGKAKVITTLPGNKIISRIIKVPLMNQK--ELNAYLDLEAEQYLPVPVKDSVL 115 Query: 120 DYSEDS--------LSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQR 166 ++AA + + L +++ I AL R Sbjct: 116 ASVILENAEADDGTKQMNVLLSAASREIIMDLYDTVVSTGLNLDVIDLPFLALYR 170 >UniRef50_C1I9R2 Type IV pilus assembly protein PilM n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I9R2_9CLOT Length = 382 Score = 86.6 bits (213), Expect = 7e-16, Method: Composition-based stats. Identities = 22/171 (12%), Positives = 56/171 (32%), Gaps = 10/171 (5%) Query: 10 LHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRE-LPQ 68 + L V L + ++P I DG++++ Q + L +E + Sbjct: 43 VDLGTNSIKLVEGKFQKNRLSLNKVIQIPTPEGCITDGKVMNLQGVIDVLDFIIKENGIK 102 Query: 69 RHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL-- 126 ++ +S + R P + E E + + + L ++ D + Sbjct: 103 AKDVIFTTNSSSIINRDILIPLVQ--EEEIETVIRYEIQQYLPINLDDYIIQFIVLDEIV 160 Query: 127 -----SPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLP 172 NVT+ + ++ L ++ A+ +++ + + Sbjct: 161 DDVGAKLKINVTSFPERMAFAYYSVVNSLELNPYALDVTYNSVNKIANYAE 211 >UniRef50_Q1PWM9 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PWM9_9BACT Length = 611 Score = 85.8 bits (211), Expect = 1e-15, Method: Composition-based stats. Identities = 19/171 (11%), Positives = 63/171 (36%), Gaps = 11/171 (6%) Query: 5 IWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPW-- 62 +GL + AV I++ E + + + + + +++++ + + + Sbjct: 68 KTVLGLDIGNNALKAVKIIKKNNEVTVVDFDIIEYPA-ALPNTKLLESHHIRDAIKIFLS 126 Query: 63 SRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDY- 121 ++ ++++ P L R P +S + + +S +++ D + +DY Sbjct: 127 KHTFSKKTDVVVSVPGQLALSRFSTIPLVSKK--QLKSLVSFEAQQQIPFDLKDVVWDYH 184 Query: 122 -----SEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRF 167 + + A++ + L +++ +++ I A+ Sbjct: 185 RLSGRTPNEEGIEIGFFASKRETLDSIINNISFPEFNLTGILSSPLAIYNL 235 >UniRef50_UPI0001BC3080 type IV pilus assembly protein PilM n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC3080 Length = 525 Score = 85.8 bits (211), Expect = 1e-15, Method: Composition-based stats. Identities = 25/208 (12%), Positives = 67/208 (32%), Gaps = 13/208 (6%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWW-RLPLENDIIKDGRIVDAQQLAKTL 59 MA + + + ++ + + +P D ++DG+I D ++LA + Sbjct: 1 MAS--TVLAITVGNDTTKISEVMYSSHRIVRVSYSNTIPTPKDCVEDGQIRDPKELATAI 58 Query: 60 L-PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLR 118 + ++ A +++ + + P M E ++ ++ D Sbjct: 59 RDELRKGEIITKDVIFAIQSNKIISKEIVAPYM--KEARLMEYIVTNATEYFPVNIDEYV 116 Query: 119 FDYSEDSLSPAY-------NVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFL 171 F YS V AA + +A+ L + V + ++ + + Sbjct: 117 FTYSILENIIDVSEKKYRLMVMAAPMGIVERYYDVADMLELRVLDLDYVGNSTLQLMRLQ 176 Query: 172 PSHQQCLAWRDNEQWLWATRYSWGRKLA 199 L+ + ++ + ++ Sbjct: 177 IDDSPTLSIQMGDEATIISIFNKNVLQL 204 >UniRef50_A3CR64 Fimbrial assembly protein, putative n=1 Tax=Streptococcus sanguinis SK36 RepID=A3CR64_STRSV Length = 470 Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 25/176 (14%), Positives = 59/176 (33%), Gaps = 10/176 (5%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPW-SREL 66 + + + V + E + + L ++ + IVD L + + Sbjct: 131 MAIDFTDESVYLVVARQKRNELEIIKMASANLPEGVVLNSEIVDPITLKNIIGDLMEQHA 190 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSE--- 123 + A + + RS + + + +S + + LD+DP S + E Sbjct: 191 ITAKYAFFALGNTNIIARSVDVAASVQNDEDIEGLVSYELQQYLDIDPTSYVIQFQEQES 250 Query: 124 ------DSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPS 173 D + + V A + L LA L++ ++ +++L + + Sbjct: 251 NSAFPLDEDTRSLMVYAVPKGVVEQYLGLANNLKLTPYVFDLQSNTFEKWLERVQA 306 >UniRef50_B7ATN9 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7ATN9_9BACE Length = 575 Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 25/242 (10%), Positives = 66/242 (27%), Gaps = 14/242 (5%) Query: 1 MA-FKIWQIGLHLQQQEAVAVAIVRGAKECF-LQRWWRLPLENDIIKDGRIVDAQQLAKT 58 MA + + + + + R + + + +P DG I D +LAK Sbjct: 1 MANKGNRTLSISINNEYIKICELSRKNNKLTTIHKAVTVPTPPRCYNDGTIRDRAELAKA 60 Query: 59 LL-PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSL 117 + + + + +S+ + P ++ + + + ++ D Sbjct: 61 IKVAIDSNRMESTKAIFSIASSKVATKEVIIP--NVKNNKIADIIMTNASEYFPVNLDEY 118 Query: 118 RFDYSEDSL--------SPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLP 169 ++ V A + LA L + V AI ++ + L Sbjct: 119 IINFEVLEKLEYENQDTKIKVLVMAMPEAMINAYYDLAGSLGLEVKAIDYVGNSTYQTLK 178 Query: 170 FLPSHQQCLAWRDNEQWLWATRYSWGRKLAVGMTSAKELAAALSVDPESVAICGEGGFDP 229 + + + + ++ +S+ I + Sbjct: 179 LQVDNSPSIVIQVENDATIVNILDNNVLQLQRTI-PYGKSVVVNALMDSMRIKYDPALKM 237 Query: 230 WE 231 + Sbjct: 238 LQ 239 >UniRef50_A8MGF3 Type IV pilus assembly protein PilM n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MGF3_ALKOO Length = 424 Score = 85.0 bits (209), Expect = 2e-15, Method: Composition-based stats. Identities = 22/174 (12%), Positives = 55/174 (31%), Gaps = 10/174 (5%) Query: 4 KIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTL-LPW 62 + + ++ + + LPLE +DG + + + + Sbjct: 77 PRKILSIDFGSKDIKIIEGKYSKNNIQVLNAITLPLEPHFYRDGVLFEKSMVTTLMNKAL 136 Query: 63 SRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYS 122 + +S+ + R P ++ E E A +S + L +DP+ ++ Sbjct: 137 KENRFSTDSTHVIINSSQIITREIIIPKVN--ENEIAAIISFQIEDFLPIDPEEYEMNHL 194 Query: 123 EDS-------LSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLP 169 + A K + L L + L + + ++A+ + + Sbjct: 195 LIGNRVDDGIEKMEILLIAVPKKIVVAHLELIKDLGLSPLVLDFQSNAICKLVK 248 >UniRef50_A6M145 Type IV pilus assembly protein PilM n=6 Tax=Clostridium RepID=A6M145_CLOB8 Length = 392 Score = 84.7 bits (208), Expect = 3e-15, Method: Composition-based stats. Identities = 23/176 (13%), Positives = 56/176 (31%), Gaps = 10/176 (5%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELP 67 + + V + +E + ++ + + DG I +++L L +E Sbjct: 53 VAFDIGSSMIKIVEGMYYKEELTIDKYITMKTPKGAVVDGEIKRSEELFNKLGQVLKENG 112 Query: 68 QRHHIMLAFPASRTLQ-RSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL 126 + + S + R P + E E + + + L ++ + S Sbjct: 113 IKAKYGICTTNSTLIINREILVPKV--EEEEMDTVVRYEIQQYLPINLEDYILQVQVLSE 170 Query: 127 -------SPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQ 175 V A K L +L + A+ + +A+ +F+ + + Sbjct: 171 EEINESKKLNVRVIAYPDKIARGYYDLLIKLDLKPYALDVNYNAINKFINCVDKNN 226 >UniRef50_UPI0001699188 Type IV pilus assembly protein PilM n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001699188 Length = 162 Score = 84.3 bits (207), Expect = 4e-15, Method: Composition-based stats. Identities = 7/84 (8%), Positives = 27/84 (32%), Gaps = 6/84 (7%) Query: 99 TAWLSGTMARELDMDPDSLRFDYSEDS------LSPAYNVTAAQSKELATLLTLAERLRV 152 + + + + + + D+ + A++S+ + + + E + Sbjct: 2 ESQIQLEADQYIPYPLEEVNIDFEVLGTSEKNPELMDVLLAASRSENVDDRVAVLELAGL 61 Query: 153 HVSAITPDASALQRFLPFLPSHQQ 176 + + +A A++ L Sbjct: 62 TAAIVDVEAYAMENACSQLVDQLP 85 >UniRef50_C8WRG1 Tfp pilus assembly protein ATPase PilM-like protein n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WRG1_ALIAD Length = 322 Score = 83.5 bits (205), Expect = 6e-15, Method: Composition-based stats. Identities = 28/183 (15%), Positives = 64/183 (34%), Gaps = 13/183 (7%) Query: 2 AFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLE-NDIIKDGRIVDAQQLAKTLL 60 + + +G+ + + G + R P + + ++D LA L Sbjct: 8 SSRSTSVGVEICDAGLRIAEVEPGKP-LRVSRLETAPWDLSQTVRDPYP--TFALASILS 64 Query: 61 PWSRELPQRH-HIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRF 119 +R + +A P+ T+ R P++ GE+E + + + + + D + Sbjct: 65 HAFDANRRRKLTVHVALPSRFTVIRQLTLPAV--GEKELQSAIELQIQHNIHLPFDEAAY 122 Query: 120 DY------SEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPS 173 DY +++ S + + AA + ++ + + I A AL R + Sbjct: 123 DYVRCEPPEDEADSVSVLLVAADKSRVNDVIQGFRAVGIRPKTIDIHALALYRLIRRFRP 182 Query: 174 HQQ 176 Sbjct: 183 DLP 185 >UniRef50_C0D961 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D961_9CLOT Length = 333 Score = 83.1 bits (204), Expect = 9e-15, Method: Composition-based stats. Identities = 23/180 (12%), Positives = 55/180 (30%), Gaps = 16/180 (8%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLP-WSREL 66 G+ + ++ + + R PL ++ + G IV + +++ L + Sbjct: 6 TGIEIGSRQVKMTQCEDNS----VLRVALEPLPDNYVNRGTIVSMEAMSEFLKEMAKKHR 61 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL 126 L P S + P+M++ L ++ FDY + Sbjct: 62 FTDKKCALVLPNSVAFSKRLTMPAMTV--EHLKINLPYEFHDFINESRKKYVFDYCLLEM 119 Query: 127 ---------SPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQC 177 S AA ++L + + ++ P+ A + + ++ Sbjct: 120 HYNDGGKPFSMDLMAAAAPKEKLQEYTLMLKHAGFKLTIAAPEIFAYSNIIRAYEAEEKP 179 >UniRef50_A6FZH9 Fimbrial assembly protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FZH9_9DELT Length = 634 Score = 82.7 bits (203), Expect = 1e-14, Method: Composition-based stats. Identities = 25/173 (14%), Positives = 52/173 (30%), Gaps = 6/173 (3%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELP 67 +G+ L + I G + + W + + G D + L Sbjct: 6 VGVDLGNRRVKIAVITSGFRGAQVMHVWEKSVSGTPGEGGDPTDP-AIDTALKMIEERGL 64 Query: 68 QRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSLS 127 + P R P R+ ++ + + + L D+ Sbjct: 65 AGLPTGVCLPGGSGSYRVLTFPFE--DPRQIAQAVTFEADGQFPLPIEELAVDHLTIKRG 122 Query: 128 PA---YNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQC 177 V AA+ + + E ++++ +T A AL + L LP+ + Sbjct: 123 DGQGRALVVAAKRTTIQHVTARFELAKLNLKLVTTSALALAQALSTLPAPELP 175 >UniRef50_D2QZ79 Type IV pilus assembly protein PilM n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QZ79_9PLAN Length = 928 Score = 82.7 bits (203), Expect = 1e-14, Method: Composition-based stats. Identities = 19/180 (10%), Positives = 55/180 (30%), Gaps = 13/180 (7%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 MA G+ + + A+ + + ++ Q + + L Sbjct: 1 MAKPSGVWGIDIGRCALKALRCRMDGDAVVADGFDYIEYPK-LLTQSDADAPQLVKEALE 59 Query: 61 P-WSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRF 119 SR + + ++ P L R F P + + + + +++ + + + Sbjct: 60 QFLSRNSLRGDKVAVSVPGESGLARFFKPPPVDVKK--IADIVKYEARQQIPFALEDVIW 117 Query: 120 DYSEDSLSPAYN---------VTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPF 170 DY + + A + ++++ + + V I A ++ + Sbjct: 118 DYQRMPGGQEVDGFALDTEIGLFAMKREQVSKAMQPFLNAGIEVDIIQLSPIACYNYISY 177 >UniRef50_C6E2S2 Tfp pilus assembly protein ATPase PilM-like protein n=3 Tax=Geobacter RepID=C6E2S2_GEOSM Length = 305 Score = 82.3 bits (202), Expect = 1e-14, Method: Composition-based stats. Identities = 34/267 (12%), Positives = 69/267 (25%), Gaps = 15/267 (5%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDII----KDGRIVDAQQLA 56 M +GL + + G K ++ +P ++ ++ + D + Sbjct: 1 MLTTRTGLGLEISAGGLNFAMVT-GGKTPKVETGLSVPFAPGMLTLSRREPNVNDPKGFV 59 Query: 57 KTLLP-WSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPD 115 L + R L + + ++ P + + E + + + L D Sbjct: 60 TALREGYLRLLTRERSVSVSVPDAVGRVVLLDLEARFRNREEGLDVIRWKLKKSLPFDIG 119 Query: 116 SLRFDYSEDSLSPA----YNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFL-PF 170 ++ DY + V+ + L + + I + L R P Sbjct: 120 TVHLDYQTLEEKESGAVSLLVSLVSRAVVTQYEELLIQAGLEPKQIDFTSFNLYRLFAPR 179 Query: 171 LPSHQQCLAWRDNEQWLWATRYSWGRKLAVGMTSAKELAAALSVDPESVAICGEGGFDPW 230 L + + + G L + S + F Sbjct: 180 LDISDDGAFVTFYQGAMTVLIFHAGVLSFYRTKEGVGDVQNLYREVNSSFLVYGDRFPGQ 239 Query: 231 EAVSVRQPPLPPPGGDF----AIALGL 253 V P F A A GL Sbjct: 240 AVGEVLCMAAPADAEAFRALVAEAAGL 266 >UniRef50_D2QWD9 Tfp pilus assembly protein ATPase PilM-like protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QWD9_9PLAN Length = 339 Score = 82.0 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 28/173 (16%), Positives = 63/173 (36%), Gaps = 15/173 (8%) Query: 9 GLHLQQQEAVAVAIVR--GAKECFLQRWWRLPLENDII-KDGRIVDAQQLAKTLLP-WSR 64 G+ L + AV + R K L++ +P + + D + + + TL SR Sbjct: 19 GIDLSEYALKAVKLTRDPKTKIVKLEQAEFIPHSSPLTHPDAELDRNELMQATLKDFLSR 78 Query: 65 ELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSED 124 + +++A P R L R F P + + + ++ ++ + L + + Sbjct: 79 ADLKGAKVVIAVPGHRVLGRFFELPPLPAKK--VAGAVQYETKHQIPINLEELCWSHYIL 136 Query: 125 SLSPA---------YNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFL 168 A V AA+ + L + + ++V + + A+ + Sbjct: 137 DERDAKTADEFPRRIMVVAAREVHVQERLAIFKTAGINVDIVQSECIAIHNAM 189 >UniRef50_B1I3E2 Type IV pilus assembly protein PilM n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I3E2_DESAP Length = 374 Score = 82.0 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 55/171 (32%), Gaps = 17/171 (9%) Query: 8 IGLHLQQQEAVAVAIVRGAKE---CFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSR 64 + + + + L R + L ND +G +L++ Sbjct: 18 TAVDYGTRAIKVATVSLAGPQPTLLQLVRTAQPELGNDETDEG-----ARLSRLAEAVDA 72 Query: 65 ELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSED 124 + H+ A A + + R P M E+E + +S + + + L Y + Sbjct: 73 AGIKGQHVFAALGADKVITRLVRVPRMP--EKELASAVSFEAEKSIPIPLSDLIVRYVKL 130 Query: 125 SLSPA-------YNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFL 168 + + A ++ + L + V +SA+ AL R L Sbjct: 131 GETEGEDGTQQQLLLAAVPAQVVHDFYELFVQAGVTISALDLQPLALWRVL 181 >UniRef50_Q0PQA6 Fimbrial assembly membrane protein type IV pilus biogenesis protein (Fragment) n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=Q0PQA6_9GAMM Length = 148 Score = 82.0 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 12/97 (12%), Positives = 31/97 (31%), Gaps = 8/97 (8%) Query: 1 MAFKIWQ---IGLHLQQQEAVAVAIVRGAKE----CFLQRWWRLPLENDIIKDGRIVDAQ 53 M F + +G+ + + + A ++ + PL + + + I D Sbjct: 10 MFFGRKKPPLVGIDISSTTVKLLELSSNAGRGGAMYRVEAYGVEPLPPNAVVEKNIADVD 69 Query: 54 QLAKTLLP-WSRELPQRHHIMLAFPASRTLQRSFPRP 89 + + + R + +A S + + P Sbjct: 70 AVGEAIKAVLRRSASKAKQAAVAVSGSAVITKVISMP 106 >UniRef50_A3ZL52 Probable fimbrial assembly protein PilM n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZL52_9PLAN Length = 766 Score = 82.0 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 23/189 (12%), Positives = 52/189 (27%), Gaps = 29/189 (15%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQR----WWRLP----LENDIIKDGRIVDA 52 MA + + A+ +L + P L + + Sbjct: 1 MAAGKGVWSIDIGHAAIKALRCTVHDDGFWLVADAFDYIEYPKLLTLPD--------ANP 52 Query: 53 QQ-LAKTLLP-WSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMAREL 110 +Q + L SR + + ++ P L R F P + + +++ Sbjct: 53 EQMIRDALKEFLSRNELKNDKVAISVPGQAGLARFFKAPPVEAK--RIPDIVKYEAKQQI 110 Query: 111 DMDPDSLRFDYSEDSLS---------PAYNVTAAQSKELATLLTLAERLRVHVSAITPDA 161 D + +D+ + + A + ++ L + V + Sbjct: 111 PFPLDEVVWDFQAMPGAHVDEGISLETEIGIFAMKRDQVFRSLQPFLDAGIDVDYVQLSP 170 Query: 162 SALQRFLPF 170 AL F+ Sbjct: 171 VALYNFVSH 179 >UniRef50_Q1V0H0 Type II Secretion n=4 Tax=root RepID=Q1V0H0_PELUB Length = 977 Score = 81.6 bits (200), Expect = 2e-14, Method: Composition-based stats. Identities = 25/172 (14%), Positives = 58/172 (33%), Gaps = 22/172 (12%) Query: 8 IGLHLQQQEAVAVAIVRGA-KECFLQRWWRLPLENDIIKDGRIVD-----AQQLAKTLLP 61 IG+ L +E V + + L++ P+ DI D +D +++L + Sbjct: 458 IGIELANKEIRIVQVSSNKANQWVLEKLHIHPV--DITDDSTPIDNADKFSEELVLAIQK 515 Query: 62 WSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLS----GTMARELDMDPDSL 117 + P + +A P + + R P M E E + +L + Sbjct: 516 YKITSP---NAAIAIPVTSAIIRVVTAPLM--KEDELNKAIETNSLWENLVQLTDSLEDY 570 Query: 118 RFDYSEDSLSP-----AYNVTAAQSKELATLLTLAERLRVHVSAITPDASAL 164 + + + A++ ++ + ++ + ++ I AL Sbjct: 571 SIFHQVINRNDKENTMDILFVASKLTDINSYTSIIKNAGLNPVIIDVKCFAL 622 >UniRef50_UPI0001746041 type IV pilus assembly protein PilM n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001746041 Length = 584 Score = 81.6 bits (200), Expect = 2e-14, Method: Composition-based stats. Identities = 22/179 (12%), Positives = 50/179 (27%), Gaps = 9/179 (5%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKE-CFLQRWWRLPLENDIIKDGRIVDAQQLAKTL 59 MA + + L+L Q + L+ + + D + Q L Sbjct: 1 MADSSFAV-LNLGSQRVGGAVFSKARNGDLVLKAFDFAEMHGDPSVE-ATRLPQLRVAIL 58 Query: 60 LPWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRF 119 + + + A P R P + +Q + + + + + + Sbjct: 59 ELADKLKLKGKTVWYAIPGHSVFTRFVKLPPFDTEKADQI--VEFEARQNVPFPINEVIW 116 Query: 120 DYS----EDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSH 174 DY E + A ++ L + E + + V+ + A + Sbjct: 117 DYEFIGDEGGSEREVALVAIKADALNDVNDQVESVGIKVAGVDLAPLAAFNAFRYAYPD 175 >UniRef50_A3ZWV9 Spectrin alpha chain-like protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZWV9_9PLAN Length = 858 Score = 80.8 bits (198), Expect = 4e-14, Method: Composition-based stats. Identities = 30/190 (15%), Positives = 57/190 (30%), Gaps = 27/190 (14%) Query: 4 KIWQIGLHLQQQEAVAVAIVRGA----KECFLQRWWR--------LPLENDIIKDGRIVD 51 + W G+ L AV + + + + PL D R + Sbjct: 534 RAW--GIDLSNSGLKAVLLSKRKLGEKENAKVVVVAEDCFQCDHKRPLSRADDADRRGLI 591 Query: 52 AQQLAKTLLPWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELD 111 + + K + + + L PAS + R P + + E+T + ++ Sbjct: 592 QESVEKLIAHLGEGGFKDAIVALGQPASELIGRFLKLPPVDQKKLEKT--IQYEARNQIP 649 Query: 112 MDPDSLRFDYSE-----------DSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPD 160 + L Y + S A + +L L +RL + + D Sbjct: 650 FPLEELSTGYHVWDSPPKDEDTIEEPSREVAFIATRLLQLQERLAFLKRLGISPHIVQAD 709 Query: 161 ASALQRFLPF 170 AL + F Sbjct: 710 PIALHNYFQF 719 >UniRef50_A7VJ09 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A7VJ09_9CLOT Length = 539 Score = 80.4 bits (197), Expect = 5e-14, Method: Composition-based stats. Identities = 19/179 (10%), Positives = 56/179 (31%), Gaps = 12/179 (6%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVR-GAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTL 59 MA + + + + + K + D +DG I D +++A+ + Sbjct: 1 MASNKKVLTIDITNESITITEVTASEKKTSTVHNAIIFETPEDSYEDGFIRDKERIAEAI 60 Query: 60 L-PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLR 118 + + +++ + R P + E + ++ + ++ + Sbjct: 61 RSQLAANGITNKDAIFVLTSTKIVNREVLVPFV--KENKIKGIINANSSEYFPVNIEDYT 118 Query: 119 FDYSEDS--------LSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLP 169 +S AA + + + +A + V A+ +A+ + + Sbjct: 119 VSHSVLETVTDEENNKQLRVLAVAAPTSMVRSYYEVAALAGLKVVALDYIGNAMLQLIK 177 >UniRef50_UPI00016C5933 probable fimbrial assembly protein PilM n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C5933 Length = 823 Score = 80.4 bits (197), Expect = 5e-14, Method: Composition-based stats. Identities = 25/185 (13%), Positives = 56/185 (30%), Gaps = 23/185 (12%) Query: 1 MAFKIWQIGLHLQQQEAVAVAI-----VRGAKECFLQRWWRLPLENDIIKDGRIVDAQQL 55 MA G+ + Q A+ + A ++ + D D I Sbjct: 1 MAVAKGYWGIDIGQCALKALRLELIDGKPTATAFDYVEHSKILSQPDADVDLLI------ 54 Query: 56 AKTL-LPWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDP 114 + L SR + + + L R P + E++ + +++ Sbjct: 55 REALDKFLSRNSVKTDEVAIGIAGQSGLARFVKLP--PVEEKKIAEIVKFEAKQQIPFPL 112 Query: 115 DSLRFDYSEDSLSPAYN---------VTAAQSKELATLLTLAERLRVHVSAITPDASALQ 165 D + +D+ + A + + A + ++ + ++ V I AL Sbjct: 113 DEVEWDFQKIGGGEAVDGFALETEIGLFAMKRDVISRYMGYFAGSKIEVHLIQMSPLALV 172 Query: 166 RFLPF 170 F + Sbjct: 173 NFATY 177 >UniRef50_A6TTT4 Type IV pilus assembly protein PilM n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TTT4_ALKMQ Length = 390 Score = 80.4 bits (197), Expect = 5e-14, Method: Composition-based stats. Identities = 19/167 (11%), Positives = 56/167 (33%), Gaps = 10/167 (5%) Query: 10 LHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLP-WSRELPQ 68 + + V + + + + D +DG+I++ +L + L Sbjct: 18 MDIGNYSIKLVTGKFADSKVSIDKAVTILTPQDCFEDGKIINMLELKEVLKRALEENKID 77 Query: 69 RHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL-- 126 + + +++ L R PS+S + ++ ++ + L ++ D + Sbjct: 78 IKSTISSIESTQILTREIVLPSVSPEDMKE--MINYEIGEYLPIELDKYVVQFKVIEEFI 135 Query: 127 -----SPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFL 168 V A ++ L + L ++ A+ ++ + + Sbjct: 136 EEDVTKQKILVAAVPAEIALNHFELIDFLGLNPVALDIHSNVISKLF 182 >UniRef50_A6C2R8 Type IV pilus assembly protein PilM n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C2R8_9PLAN Length = 356 Score = 80.4 bits (197), Expect = 6e-14, Method: Composition-based stats. Identities = 23/171 (13%), Positives = 45/171 (26%), Gaps = 15/171 (8%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDA--QQLAKTLLP-WSR 64 IGL L V + + + + D +D ++A + S Sbjct: 12 IGLQLGPNSVTLVQLTGPRNNRVVHAIAQEQFD---FDDKLTLDERDAKIAGEIRRILSD 68 Query: 65 ELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSED 124 + + + ++ P + E T ++ L + Sbjct: 69 HHFKGRRAISCLGSQELFIQNIRLPQLPT--EELTKVVAWEAEERLPYPVVDAEIRHLPA 126 Query: 125 SL-------SPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFL 168 + A L L L E+ ++ AI + SA R Sbjct: 127 GQVRQEANTKQEVILLACHKGILERHLNLLEQSGLNAVAIDVEPSATLRCF 177 >UniRef50_A6C8P9 Probable fimbrial assembly protein PilM n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C8P9_9PLAN Length = 709 Score = 80.0 bits (196), Expect = 7e-14, Method: Composition-based stats. Identities = 23/179 (12%), Positives = 52/179 (29%), Gaps = 13/179 (7%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLE-NDIIKDGRIVDAQQLAKTL 59 MA G+ + Q A+ + + + I+ V + + + L Sbjct: 1 MAENQAVWGIEIGQAGLKAIRLRYAEAADQVIAVAFDYIPHPKILSQPDAVPDELIGQAL 60 Query: 60 -LPWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLR 118 SR I ++ P +L R P + + + +++ + + Sbjct: 61 DTFLSRNETNGDLIAISVPGQTSLARFIQLPPVQSNRVPEI--VKYEAKQQIPFALEDVI 118 Query: 119 FDYSEDSL---------SPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFL 168 +DY + A + ++ L + ++ V I L L Sbjct: 119 WDYQPLGGGIEESGYMLDAEVGIFAMKRDQVLHALQPFLKRKIEVELIQIAPLGLYNTL 177 >UniRef50_A3ZUU3 Type IV pilus biogenesis protein PilM n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZUU3_9PLAN Length = 348 Score = 78.5 bits (192), Expect = 2e-13, Method: Composition-based stats. Identities = 19/167 (11%), Positives = 42/167 (25%), Gaps = 14/167 (8%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSREL- 66 IG+ + + V + L + L + + + L L Sbjct: 12 IGVDIGSRSIKMVQFTADRQ--QLFEYANYDLPGGGAE--SVPTGESLQAALKQCMEGRR 67 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRF------D 120 + ++ ++ P E + A + D Sbjct: 68 FRGKDAIVCVGRRDLFLQNIRIPKNETKPLEL--LVQQEAAGRIPYSVTDAEIRHFATCD 125 Query: 121 YSEDSLSP-AYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQR 166 + ++ V A L L E + A+ + +A+ R Sbjct: 126 VRQGDVAAQEVVVMACHRPTLELRLEAIEASGLRPLAVDVEPAAILR 172 >UniRef50_B2UR42 Cell division protein FtsA n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UR42_AKKM8 Length = 594 Score = 78.1 bits (191), Expect = 3e-13, Method: Composition-based stats. Identities = 18/158 (11%), Positives = 47/158 (29%), Gaps = 11/158 (6%) Query: 23 VRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELPQRHHIM-LAFPASRT 81 L R+ + D +G + ++ + + +EL + ++ + Sbjct: 6 KTSKDALILDRYATRLVVLDPSAEG--LRLTKIGEAIADLVQELNVKGSVVNYSVSGQSV 63 Query: 82 LQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSLS---PAYNVTAAQSK 138 R P++ + EQ + + + D + +DY + A +++ Sbjct: 64 FIRFVKLPALDDTDVEQ--LIRFEAQQHVPFPLDEVVWDYHLLPAKGLEREAILVAIKAE 121 Query: 139 ELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQ 176 +L +L + + AL Sbjct: 122 DLDSLNDEIVSHGLSTGKVD---CALTSLYNAYVDSYP 156 >UniRef50_B8JD40 Fimbrial assembly family protein n=4 Tax=Anaeromyxobacter RepID=B8JD40_ANAD2 Length = 545 Score = 77.7 bits (190), Expect = 4e-13, Method: Composition-based stats. Identities = 26/153 (16%), Positives = 49/153 (32%), Gaps = 5/153 (3%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELP 67 +GL L AV + + + P+ D + A+Q A Sbjct: 6 LGLDLGAHAVKAVLLESTYRGYAVLDTASAPVPAAEGDDAPPLLARQAAAVHQLLGERGW 65 Query: 68 QRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSLS 127 + ++AFP S P EQT + + ++ D ++ +D+ + Sbjct: 66 RVDESVVAFPGSSVSSNVVTLPFTDARRIEQT--IGFEVEGQIPFDLATVAWDWQPLGVR 123 Query: 128 PA---YNVTAAQSKELATLLTLAERLRVHVSAI 157 V + +EL LL + A+ Sbjct: 124 DGKSDLLVGVVRREELGALLAALGHGGLDPRAV 156 >UniRef50_C4ZCH3 Type IV pilus assembly protein PilM n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZCH3_EUBR3 Length = 630 Score = 77.7 bits (190), Expect = 4e-13, Method: Composition-based stats. Identities = 24/177 (13%), Positives = 60/177 (33%), Gaps = 12/177 (6%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTL- 59 MA ++ +G+ + + V I AK + + P +I DG + L Sbjct: 1 MANRV--LGIEIGENLTRVVEIDYKAKNPKIYNMFGFPTPPGMIDDGVVQPDGMFRSILY 58 Query: 60 LPWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRF 119 + + ++R R P + E++ ++ + +D + Sbjct: 59 SKLKEKKISTKKAVFVLNSARIASRDIELPLV--KEKQLKEMIAMNASDYFPVDLSQYKL 116 Query: 120 DYS-------EDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLP 169 + + +V A + + + LA R+ + A+ +A+++ + Sbjct: 117 VHQIIEKIDRPEEKKLRLSVIAVPNDLILSYGALAADCRLQLVALDYSGNAIKQLMR 173 >UniRef50_Q061N4 Putative uncharacterized protein n=1 Tax=Synechococcus sp. BL107 RepID=Q061N4_9SYNE Length = 579 Score = 77.7 bits (190), Expect = 4e-13, Method: Composition-based stats. Identities = 28/187 (14%), Positives = 51/187 (27%), Gaps = 14/187 (7%) Query: 10 LHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSREL-PQ 68 L L R+ L + ++ G D +++A L E + Sbjct: 4 LEFGSDFLRLSESSITPNGIQLNHISRVQLPPEALERGVPTDPRKMAGLLQQICAEKKIR 63 Query: 69 RHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSE----- 123 H + + P QR P+ + + ++ FD S Sbjct: 64 AHRVAVVLPPEVGFQRIVELPTALSTDEARGYVQDAKNCIQIPFPLAQTDFDLSPVPFPG 123 Query: 124 ----DSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRF----LPFLPSHQ 175 Y +TA + ++ + + + S+ R LPSHQ Sbjct: 124 DTNSHGDHSPYLLTAIPQLLVDRIIETLQIADFELQLLELGNSSQLRAMALDFTVLPSHQ 183 Query: 176 QCLAWRD 182 L Sbjct: 184 VDLVLEL 190 >UniRef50_B1YJT3 Fimbrial assembly family protein n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YJT3_EXIS2 Length = 583 Score = 77.3 bits (189), Expect = 4e-13, Method: Composition-based stats. Identities = 25/157 (15%), Positives = 50/157 (31%), Gaps = 8/157 (5%) Query: 31 LQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSREL--PQRHHIMLAFPASRTLQRSFPR 88 ++R + L ++ G + L +L P+ +LA S L R Sbjct: 30 IKRRGVVSLPPGTLQGGWLQPEASLDLIFDSLLAKLKVPRGSQAVLAIDGSLVLARKLEI 89 Query: 89 PSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL--SPAYNVTAAQSKELATLLTL 146 P + + + + + + FDY+ + AA ++ L + L Sbjct: 90 PETVETNQIRGYLFM-ELGHSIVLPFEEPYFDYTLLEEDGKREIMLYAAPNEALKQYMEL 148 Query: 147 AERLRVHVSAITPDASAL---QRFLPFLPSHQQCLAW 180 + + + A P A L + + L W Sbjct: 149 FRKKHIRLVAAEPQPLATFFGLDALYEVEADSNLLIW 185 >UniRef50_C0AA00 Fimbrial assembly family protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0AA00_9BACT Length = 567 Score = 77.3 bits (189), Expect = 4e-13, Method: Composition-based stats. Identities = 25/177 (14%), Positives = 55/177 (31%), Gaps = 15/177 (8%) Query: 1 MAFKIWQIGLHLQQQEAVAVAI--VRGAKECFLQRWWRLPLENDIIK--DGRIVDAQQLA 56 MA + + A + L+R D + D + + L Sbjct: 1 MASPR-VLAVDCGAGHV-ACGLFTKDKTGRLTLERLAVETFNPDAAQEADWPLFFGESLT 58 Query: 57 KTLLPWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDS 116 + + + LA P TL + P++ +RE+ ++ + + Sbjct: 59 EIVRRERFSGA----VTLALPGHHTLSKFVKTPAVDKSKRERI--IAFEAQQNIPYPLSE 112 Query: 117 LRFDYSE---DSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPF 170 + +D+ D L + AA+ ++ + V +T +A+ R Sbjct: 113 VVWDHVTVSDDGLDMEVMLAAAKLDIAESICAAVAEAGLTVEKVTASTTAVLRCFRA 169 >UniRef50_Q7UV57 Probable fimbrial assembly protein PilM n=1 Tax=Rhodopirellula baltica RepID=Q7UV57_RHOBA Length = 719 Score = 77.3 bits (189), Expect = 5e-13, Method: Composition-based stats. Identities = 25/181 (13%), Positives = 54/181 (29%), Gaps = 15/181 (8%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQL-AKTL 59 MA G+ + Q A+ V+ E + + I D QL A L Sbjct: 1 MAGSGGVWGIEIGQSALKALHCVKQGDEIVADAFDLIEYPK--ILGQADADPDQLIADAL 58 Query: 60 LPWSRELPQRH-HIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLR 118 + + ++ P L + F P + L + + ++ + + Sbjct: 59 DQLMQRNDAIRDRVCISVPGQSGLAKFFKPPPVELKK--IHDIVKYEAKTQIPFELSDVV 116 Query: 119 FDYSEDSLS---------PAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLP 169 +DY + + A + ++ L + + V + AL + Sbjct: 117 WDYQTMPGATIQEGYALESEVGLFAMKREQAYRQLAPFKDADIEVDMVQLTPIALYNMVA 176 Query: 170 F 170 + Sbjct: 177 Y 177 >UniRef50_A4XIE8 Tfp pilus assembly protein ATPase PilM-like protein n=2 Tax=Clostridia RepID=A4XIE8_CALS8 Length = 320 Score = 76.9 bits (188), Expect = 6e-13, Method: Composition-based stats. Identities = 20/169 (11%), Positives = 57/169 (33%), Gaps = 11/169 (6%) Query: 10 LHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPW-SRELPQ 68 + + + + R++ L+++IIK+ VD L L ++ Sbjct: 7 VEIGKNYVRVAEGKFQNSSIEINRFFEKNLDDNIIKEDIKVDDVLLQIELRSLFNQNKVG 66 Query: 69 RHHIMLAFPA-SRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDS-- 125 + ++ + F S L R P ++ + + + + ++ DS DY + Sbjct: 67 KKNVNVIFSGISNILIRELEMPYVA--DDKIYNMIRHEARQYFPINIDSYVLDYKQLKIF 124 Query: 126 -----LSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLP 169 + + ++ + + +S I + +++ + Sbjct: 125 DEGKIKKQKILIVGVHRFLIEGVINAFKNAGIKISKIDIEPNSIVKLFK 173 >UniRef50_A8ZWZ1 Fimbrial assembly family protein n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZWZ1_DESOH Length = 486 Score = 76.6 bits (187), Expect = 7e-13, Method: Composition-based stats. Identities = 23/180 (12%), Positives = 45/180 (25%), Gaps = 17/180 (9%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELP 67 +G+ + AV + G ++ + D + Q L L Sbjct: 6 LGIDIGNTTVCAVLVGPGESGLRIEAHAHAAMGKD------VSPWQVLPGVLDALGHRAD 59 Query: 68 QRHHIMLA-FPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSED-- 124 +A FP + R P + E+ ++ + L P L D+ Sbjct: 60 WSGAACVATFPDRQVSYRRIHMPFADPRKIEK--VIAYELEPLLPFAPADLFIDFVVLFP 117 Query: 125 ------SLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCL 178 A +++ + + I P A L + Sbjct: 118 AVSQENEAGVEVLAAAVHKEKVKEWIDGFAGAGLQPEMIVPRGWAAAAVLSADIEEALLV 177 >UniRef50_A8VZF1 Cyclic nucleotide-binding n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VZF1_9BACI Length = 327 Score = 76.2 bits (186), Expect = 9e-13, Method: Composition-based stats. Identities = 24/165 (14%), Positives = 53/165 (32%), Gaps = 12/165 (7%) Query: 12 LQQQEAVAVAIVRGAKECFLQRWWRLP---LENDIIKDGRIVDAQQLAKTLLPWSRELPQ 68 + V + L + L I+ G I + + + R+ Sbjct: 15 IHDHVIRYV----KGRGSTLDDLKVVRNRFLPPGTIEGGVIKETETFQAIIGELKRQYKM 70 Query: 69 RH-HIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSLS 127 + + P L R P+ + + E ++ + +EL + + FD S Sbjct: 71 AKGELYITLPNETNLIRRHQVPA-DVPDHELKGYIFNQLGKELHLPMEDPVFDLCIMSEQ 129 Query: 128 ---PAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLP 169 + + + + L L L++ + A +L+RF+ Sbjct: 130 NAEKDLLLFITAQEIIDSYLRLFYELKLEPVVLDYAAISLERFIE 174 >UniRef50_B1BAN2 Type IV pilus assembly protein PilM n=2 Tax=Clostridium RepID=B1BAN2_CLOBO Length = 352 Score = 76.2 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 22/176 (12%), Positives = 58/176 (32%), Gaps = 11/176 (6%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 M + I + + V + + + + I DG I+D +A+++ Sbjct: 1 MFKRK-VISFDIGNRNIKLVEGKCDGDKVIVTNMDSIETPRNTINDGNIIDVNLIAESIR 59 Query: 61 PWS-RELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRF 119 + + +++ ++ + R+ P E+ + + + + L +D + Sbjct: 60 KLLDKAATKTKNVIFTSQSTSIITRTVEIPWA--KEKAMKSMIKYDIEQYLPIDLEEYII 117 Query: 120 DYSEDSL--SPAYNVTAA-----QSKELATLLTLAERLRVHVSAITPDASALQRFL 168 + + A K L + L + A+ SA+++ L Sbjct: 118 KHKVIEEFQKEEVKMVRANVVVYPKKMAKMYWNLVKELELKPIALEVSLSAMEKVL 173 >UniRef50_C9RKD6 Tfp pilus assembly protein ATPase PilM-like protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKD6_FIBSS Length = 382 Score = 75.8 bits (185), Expect = 1e-12, Method: Composition-based stats. Identities = 29/196 (14%), Positives = 50/196 (25%), Gaps = 30/196 (15%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQR-WWRLPLENDIIKDGRIVDAQ------------- 53 +G+ + V + A + R P+ I +G I Sbjct: 16 VGIDVGHYSIKYVKVYHDANGKRIVREVDLEPVPAGSIINGLIQRRDTDDLSTEKGAKKE 75 Query: 54 -----QLAKTLLPWSRELPQRHHIMLAFPAS------RTLQRSFPRPSMSLGEREQTAWL 102 +L + P ++ + + L + A + Sbjct: 76 KDGFDKLGEAFSKLLLRHPIDENVDVVASVNCGAGEGGVLVDRLSI--KVPKNGNEAAII 133 Query: 103 SGTMARELDMDPDSLRFDYSE---DSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITP 159 T D DY + NV AA+S L + R V +SA+ Sbjct: 134 VQTAQSRPPFDDQDNVLDYEVVSREGDEVKVNVVAAKSSMLDSWAQFFTRKGVRLSALDV 193 Query: 160 DASALQRFLPFLPSHQ 175 D L S + Sbjct: 194 DIFGLLNSFVMTASDE 209 >UniRef50_D2QZ99 Type IV pilus assembly protein PilM n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QZ99_9PLAN Length = 361 Score = 75.8 bits (185), Expect = 1e-12, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 55/175 (31%), Gaps = 16/175 (9%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELP 67 IG+ L + V + L R L D + + +AK+ + Sbjct: 13 IGIDLGSRSVKLVQLSADRS--NLIDASRWDLPAQSTADSAKMSPEAIAKSQADLYSQAI 70 Query: 68 ---------QRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLR 118 + +++ + +S P + E++ + +R Sbjct: 71 EQALMGRAFKGREVVICLGDKQLSLQSVRVPRDEGAQLERSVLQETAGRLSYPITEAEVR 130 Query: 119 F----DYSEDSLS-PAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFL 168 F D + + V A Q K + L + + LR+ AI + +AL R Sbjct: 131 FIPASDVRQGEQTLKEVIVFAVQKKVIDNTLAMLDALRLEPVAIDVEPAALARAY 185 >UniRef50_C5A9J9 Putative uncharacterized protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5A9J9_BURGB Length = 316 Score = 75.8 bits (185), Expect = 1e-12, Method: Composition-based stats. Identities = 25/180 (13%), Positives = 50/180 (27%), Gaps = 11/180 (6%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 MA + G+ + Q + R ++R PL+ G D + + L Sbjct: 8 MAGRRLAAGIDVGQDVVRVAFVSRRGSVIGIERLECEPLDASHDVAGG--DWAAVTRALA 65 Query: 61 PW----SRELPQRHH-IMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPD 115 LP +A + + + R M D Sbjct: 66 RVAGRAGARLPVGRMPAAMALSCREVAMSM--LDARLAADGPLEPAVLVEAERATGMARD 123 Query: 116 SLRFDYSEDS--LSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPS 173 SL D+ + + + + + A ++AI + A R + + + Sbjct: 124 SLAIDWCVNDILHPGRVMIASTDRARIDVRVEAAAAAGFGLTAIDGEPHAALRAIRQVAA 183 >UniRef50_D1B5I8 Tfp pilus assembly protein ATPase PilM-like protein n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B5I8_THEAS Length = 315 Score = 75.4 bits (184), Expect = 2e-12, Method: Composition-based stats. Identities = 22/170 (12%), Positives = 56/170 (32%), Gaps = 11/170 (6%) Query: 9 GLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELPQ 68 GL + + +A+ ++ + L+ + D L LL +E+ Sbjct: 12 GLFVFGDKMQYLALDGKRGSLSVKAMVEVGLDMAPTQRDVWSDPVALEGHLLKLKKEMGG 71 Query: 69 R--HHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSED-- 124 + +L + + + P M + ++ + FD + Sbjct: 72 KWPGSAVLGIQSKDVMVKVVQVPRMDERDMKEAF--KFEFDKHFPFPSQEAVFDLAMIDH 129 Query: 125 -----SLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLP 169 + A++S+ + + L + + + + ++ P A A+ R L Sbjct: 130 PLDSGGETAFAVAAASRSRPVESFLQVCNKAGLMIQSVEPSAVAMLRALQ 179 >UniRef50_A5EW40 Type IV fimbrial biogenesis protein PilM n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EW40_DICNV Length = 337 Score = 75.4 bits (184), Expect = 2e-12, Method: Composition-based stats. Identities = 28/172 (16%), Positives = 53/172 (30%), Gaps = 10/172 (5%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTL-LPWSREL 66 +G+ + Q + K + +DI D L L W Sbjct: 4 VGVDIGQYAIKIAKAKKSGKVFVCDFLISEVIPSDI---REKKDKLALKNLLNRIWKEYK 60 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL 126 + ++ A T+ R SL E + +A + + + FDY+E Sbjct: 61 LSSYTPVIHVHAGDTIMRQVHV-DESLSGNELEGAMELDLAPAIPFGIEQVYFDYAEKPD 119 Query: 127 -SPAYNVTAAQSKELATLLTLA----ERLRVHVSAITPDASALQRFLPFLPS 173 + AA+ + L + + D A +R + +LP+ Sbjct: 120 ANGDRLAVAARRDLIDPKTDLFVDPKKPKAKIKPMVDVDVFAYERLVSYLPN 171 >UniRef50_D1N631 Type IV pilus assembly protein PilM n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N631_9BACT Length = 622 Score = 75.0 bits (183), Expect = 2e-12, Method: Composition-based stats. Identities = 15/193 (7%), Positives = 46/193 (23%), Gaps = 27/193 (13%) Query: 1 MAFKIWQIGLHLQQQEAVAVA-IVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTL 59 MA + + + + + L+++ LE ++G + Sbjct: 1 MAKENTVLTIDVGGDNLKMAEFVFPPGGAIMLRKFAFRKLEE---QEGMTPEEVFARNYR 57 Query: 60 LPWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRF 119 + + L+ + R P + + + + + + + + Sbjct: 58 EMLAEGGFVAKSVRLSLSGQSSFSRLSKLPPLMGNKSAINKIVEYEARQTVPYPMNEVVW 117 Query: 120 DYSEDS-----------------------LSPAYNVTAAQSKELATLLTLAERLRVHVSA 156 DY A ++ ++ + E + + Sbjct: 118 DYQLIRHEWEDTRVETQEDGSTLEIADSHEEYEALFVAVKTDQITCYTDVIEDSGKEILS 177 Query: 157 ITPDASALQRFLP 169 + AL Sbjct: 178 VEIAPVALFNAAK 190 >UniRef50_Q7UG76 Similar to spectrin alpha chain n=1 Tax=Rhodopirellula baltica RepID=Q7UG76_RHOBA Length = 731 Score = 73.1 bits (178), Expect = 8e-12, Method: Composition-based stats. Identities = 23/171 (13%), Positives = 58/171 (33%), Gaps = 11/171 (6%) Query: 9 GLHLQQQEAVAVAIV--RGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSREL 66 G+ + A+ + +G+ + ++ R+ L+N + G ++ + + + E+ Sbjct: 402 GIDVGASGINAIKMRVEKGSDQPIVEAAHRVELKNPTCRGGSKSASELIPEAITRLMEEI 461 Query: 67 PQRHHIMLA-FPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDS 125 + A PA + R P + + E+ + + + + + L Sbjct: 462 DVSDSKVYANLPACEGIARFCELPPVKDKDAER--LIETEVKTRIPISTEDLALITWVAP 519 Query: 126 LSPA------YNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPF 170 L + AA ++ + L + + + P AL F Sbjct: 520 LQKGSTVGRPVVMAAATKLTVSRRVDLLGIGGLKLDGLVPSPIALANFAAH 570 >UniRef50_B3E8R7 Tfp pilus assembly protein ATPase PilM-like protein n=1 Tax=Geobacter lovleyi SZ RepID=B3E8R7_GEOLS Length = 306 Score = 72.3 bits (176), Expect = 1e-11, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 53/163 (32%), Gaps = 9/163 (5%) Query: 4 KIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIK----DGRIVDAQQLAKTL 59 + IG+ + AV + A LQR R L + ++ + +++ +L Sbjct: 5 QRKAIGIEISHGGIAAVMLSCPAGRIVLQRATRTALPANTLQPSLKEAQVLQPAAFVNSL 64 Query: 60 L-PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLR 118 W I L+ P + L E T L +A+ L M+P+ L+ Sbjct: 65 REAWGSLNLSTRRIALSLPDNAGLLLLTRLDEPWKTRDEATGMLRWKLAKRLGMEPELLQ 124 Query: 119 FDYSEDSLSPA----YNVTAAQSKELATLLTLAERLRVHVSAI 157 D+ P V + L + + + I Sbjct: 125 LDFHLLERKPDGSTDLLVALVHRTVIQQYEDLFQEAGLQPARI 167 >UniRef50_Q6MMP1 Putative type 4 fimbrial biogenesis protein PilM n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MMP1_BDEBA Length = 657 Score = 71.9 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 53/162 (32%), Gaps = 12/162 (7%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSREL- 66 +G+ + V + +K + ++ PL I G + + L + L S Sbjct: 106 LGIDIGSSSIKVVEVQSTSKGFQVTQFMEHPL---GISPGADQELEIL-EYLRDLSSLYD 161 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSED-- 124 P + A P +R R+ P + ++ L+ + +L D+ FD Sbjct: 162 PAQTRFNFALPQNRVAMRNKFFPFNDRIKISKS--LAFELEEDLPFSSDNAIFDAKIIRT 219 Query: 125 -SLSPAYNVTAAQSKELATLLTLAERLRVHVSAI--TPDASA 163 AA + L+ A+ + I + A Sbjct: 220 VGSGAEVLACAAPKIHVQNLIQRAQDSNMDPFIISSEGTSFA 261 >UniRef50_A1ARQ4 Putative type IV pilus assembly protein PilM n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ARQ4_PELPD Length = 315 Score = 71.9 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 23/177 (12%), Positives = 49/177 (27%), Gaps = 11/177 (6%) Query: 3 FKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIK----DGRIVDAQQLAKT 58 F+ +G+ + A + + L+R PL ++ + I D Q Sbjct: 10 FRRKSLGVEIGPAGAAFALLGGSSTNPCLERVAFRPLAPGALRPSLREANITDPQAFCDC 69 Query: 59 LLPWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAW--LSGTMARELDMDPDS 116 L +L Q ML+ + R + + + + + +D Sbjct: 70 LREAHSQLLQGGT-MLSVTLPDAVGRVLLMDVEGRFKNRAEGLDIIRWKLKKSMPLDVGD 128 Query: 117 LRFDYS---EDSLSPAYNVTA-AQSKELATLLTLAERLRVHVSAITPDASALQRFLP 169 DY + + + + L + + I + L R Sbjct: 129 THLDYQKLRVSENNDMLLLVSLVSRSVIGQYEDLIAAAGLVPARIDLNLFNLYRTFE 185 >UniRef50_UPI0001C36943 type IV pilus assembly protein PilM n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36943 Length = 492 Score = 70.8 bits (172), Expect = 4e-11, Method: Composition-based stats. Identities = 24/175 (13%), Positives = 59/175 (33%), Gaps = 11/175 (6%) Query: 7 QIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSREL 66 ++ ++L + E V + R K + + L+ + + + + + + L + Sbjct: 2 RLSVYLGENEIRTV-LGRSGKTIEIMDCLNVRLKEGALINDVVTEEAAVKEVLNGIRKRY 60 Query: 67 PQRHH-IMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMAREL-DMDPDSLRFDYSE- 123 + + L ++ + + P + + + ++ + + D +DYS Sbjct: 61 GKYRRHVYLTMGGNQIITKVLSAPRLPRC--QMMELVRRELSDLILPSEKDGYVYDYSIV 118 Query: 124 -----DSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPS 173 D A + + TL + + AI L + FLPS Sbjct: 119 RKKNKDHKGRTILCVAMKRSVIHEYQTLFSECGMKLKAIDVAVDGLNSLVDFLPS 173 >UniRef50_Q3A898 Putative uncharacterized protein n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A898_PELCD Length = 306 Score = 70.0 bits (170), Expect = 7e-11, Method: Composition-based stats. Identities = 30/186 (16%), Positives = 54/186 (29%), Gaps = 12/186 (6%) Query: 8 IGLHLQQQEAVAVAIVRGAK-----ECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPW 62 +GL L + AV + R K + W + L+ D + + + + Sbjct: 7 VGLSLCEDGLRAVMVRRSRKQTQIIGWQSRSWPSVCLKPDYQRLNILEEDSFVNTVRETL 66 Query: 63 SRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYS 122 + L+ + R+ L + L +DP+ +R D+ Sbjct: 67 RSLGIINGRVALSLSDAVGKIVITDLNEPLKRGRDGINLLKWQVREHLLLDPEEIRLDFQ 126 Query: 123 EDSLSPA----YNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFL---PFLPSHQ 175 P V AA + L L + + D+ L F L Sbjct: 127 VLGTEPGGKTRVLVAAAAKEVLDQYENLLAAAGAIPALVLFDSLNLMHFYHSKRILTCDH 186 Query: 176 QCLAWR 181 +AW Sbjct: 187 LLVAWT 192 >UniRef50_C1TME3 Putative uncharacterized protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TME3_9BACT Length = 314 Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 29/206 (14%), Positives = 66/206 (32%), Gaps = 15/206 (7%) Query: 9 GLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELPQ 68 GL + + ++R + + R+ + + +K +VD ++ + + S + Sbjct: 15 GLAIMSNGIYYLELLRSDTDLAVNRYEFVSYSHGAVKQDSLVDQEEAVRAIGELSDRIGG 74 Query: 69 RH-HIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSED--- 124 + L P+ + ++ P M L E + A L + D +D Sbjct: 75 FGFDVALGIPSRDVMIKNVEFPDMDL-EMAKDA-LHWNFDKNFPYDASEALYDADVIELP 132 Query: 125 --SLSPAYNVT--AAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLAW 180 ++ A + ++ L V +S++ P+ A R + S + Sbjct: 133 DGGKQDRVHLVVAAVRRFKIQGFLERLRGDGVPLSSMEPNNVAAFRAISRGMS-----IY 187 Query: 181 RDNEQWLWATRYSWGRKLAVGMTSAK 206 L S + +S Sbjct: 188 DHGYIVLIIAAESLQMMIGYRESSLL 213 >UniRef50_Q1Q6D7 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q6D7_9BACT Length = 422 Score = 68.9 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 53/135 (39%), Gaps = 11/135 (8%) Query: 43 IIKDGRIVDAQQLAKTLLPWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWL 102 ++KD I D+QQL L+ + I+L+ P + R P ++ E + L Sbjct: 42 VVKDFLIKDSQQLKPILVQQKKFAG---EIILSVPRELCIIREIEFPYANIKELREA--L 96 Query: 103 SGTMARELDMDPDSLRFDYSEDSLSPA---YNVTAAQSKELATLLTLAERLRVHVSAITP 159 S + + + + + FD S + + A + + L +L + L + S + Sbjct: 97 SYQLDSFIPFNNEDVYFDIHLLSRNRHNSKVLIVAVKKEALDDILLRLKALEIMPSRVII 156 Query: 160 DASALQRFLPFLPSH 174 A F+P + Sbjct: 157 TPFA---FIPLIADK 168 >UniRef50_Q2SU67 Putative uncharacterized protein n=37 Tax=pseudomallei group RepID=Q2SU67_BURTA Length = 316 Score = 68.9 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 83/300 (27%), Gaps = 49/300 (16%) Query: 9 GLHLQQQEAVAVAIVRGAKE--CFLQRWWRLPLENDIIKDGRIVD--------AQQLAKT 58 G+ + ++ + R L+ PL + D L + Sbjct: 16 GIDVSRRAVRIAVLSRRVGGGTVRLEALDAEPLPAGAFAEPADADWTAVAAAMTAALGRA 75 Query: 59 LLPWSRELPQRHHI-MLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSL 117 L +R ++A P + PS + R + D+L Sbjct: 76 PQVRPAGLARRTMAGVMALPEGAFSSSTLAWPSAETAAAAIEPAVRAAAERLTGLARDAL 135 Query: 118 RFDYSED--SLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPS-- 173 D+ + SP A L + A V + AI + A R + + + Sbjct: 136 AVDWCVNDAGASPEVAFATAAHVHLDARIEAAASAGVELVAIDGEPPAALRAIRHVAARE 195 Query: 174 -----HQQCLAWRDNEQWLW-ATRYSWGRKLAVGMTSAKELAAAL-----SVDPESVAIC 222 + + + W + + ++ +LA AL + P I Sbjct: 196 VDDGEPYLGVWIGEGGVYGWLVSADTVAAQIRYPAPEHADLADALRELARAGAPRCAFIA 255 Query: 223 GEGGFDPWEAVSVR-------QPPLPPPGGD----------------FAIALGLALGKAY 259 G+ + +S+ LP FA+A GLAL Y Sbjct: 256 GDPEWLGGAQISLADVGDLLGCIVLPFECAAGGTLGAVDDGFARSPGFAVAFGLALRGVY 315 >UniRef50_A9GDP5 Putative general secretion pathway protein L n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GDP5_SORC5 Length = 504 Score = 68.5 bits (166), Expect = 2e-10, Method: Composition-based stats. Identities = 20/176 (11%), Positives = 53/176 (30%), Gaps = 19/176 (10%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELP 67 +G+ + A I + F++ + + + +A+ + + L Sbjct: 5 LGIDAGKSVVRAALIRTTYRRVFVEALGEAAVTDG------VSEAEAIRAAV-----GLH 53 Query: 68 QRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSLS 127 + +A ++ R P+ + E E L + + + + FD+ Sbjct: 54 RPDAAAIALSGEKSFYRRLDLPAAAQKEVE--NVLGFELEATVPFEMEDAVFDHRLLKRP 111 Query: 128 PA-----YNVTAAQSKELATLLTLAERL-RVHVSAITPDASALQRFLPFLPSHQQC 177 P A++ ++ + + + + A AL +P Sbjct: 112 PGVETLPVFAAVARADDVRERIAVVKEALGFEPERVALGAVALANLEAVMPELAAP 167 >UniRef50_D0I3T9 Type IV pilus biogenesis protein PilM n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I3T9_VIBHO Length = 291 Score = 68.5 bits (166), Expect = 2e-10, Method: Composition-based stats. Identities = 22/123 (17%), Positives = 42/123 (34%), Gaps = 9/123 (7%) Query: 54 QLAKTLLPWSRELPQRHHI--------MLAFPASRTLQRSFPRPSMSLGEREQTAWLSGT 105 L + L ++L + ++ S + FP + E EQ + Sbjct: 23 SLEEALNTVKKQLRKACRAPWQWPVRQIMGVAQSNVATKRFPTSP-DITENEQYVQVGLQ 81 Query: 106 MARELDMDPDSLRFDYSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQ 165 ++ L + D L +DY S A + L +L+ + + ++ I AL Sbjct: 82 LSESLGLPMDDLLYDYRPLPGSDGVEAYACRKPMLKEILSALDAVGYKLTVIELQTHALM 141 Query: 166 RFL 168 R Sbjct: 142 RLY 144 >UniRef50_C0QK71 GspL n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QK71_DESAH Length = 465 Score = 68.1 bits (165), Expect = 2e-10, Method: Composition-based stats. Identities = 33/230 (14%), Positives = 68/230 (29%), Gaps = 15/230 (6%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPL-ENDIIKDGRIVDAQQLAKTL 59 M F+ IG+ +++ + + + K L L + + ++ + A+ + + + Sbjct: 1 MFFQN-SIGIDIRENSIIVLRLKSSFKGIRLVAHNEFVLQKKETLEQNLVSAAEFVGEWI 59 Query: 60 LPWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRF 119 + P+ I L P S + + P L M + + + D + F Sbjct: 60 DQ---DTPESALIHLGIPRSLAILKFIELPFAVKEN--LGTTLKYEMDKHVPIPVDDIDF 114 Query: 120 DYSEDSLSP-----AYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPS- 173 DY + + K L L + L V + +SA L + Sbjct: 115 DYQILEADEKRNLLRVLLVVVKKKSLRPYLNFIKGLGQKVLGVEITSSAFFNCFCHLSNG 174 Query: 174 --HQQCLAWRDNEQWLWATRYSWGRKLAVGMTSAKELAAALSVDPESVAI 221 + + L G + E + ES Sbjct: 175 AFKGRQAFVGLTSELLEIGIVEHGLLTSSRSFPLAEYDGEVQGLIESELH 224 >UniRef50_Q3A3Y1 Putative uncharacterized protein n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A3Y1_PELCD Length = 295 Score = 67.3 bits (163), Expect = 4e-10, Method: Composition-based stats. Identities = 32/241 (13%), Positives = 66/241 (27%), Gaps = 15/241 (6%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRG-AKECFLQRWWRLPLENDIIKDGRIVDAQQ----- 54 M + + IG+ L + R K L + D+ + + + Sbjct: 1 MKRRRY-IGIDLHDGNMRIAGMHRRWRKGAQLFASRIENMPKDMTLESLKQASPEAEQVF 59 Query: 55 LAKTLLPWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDP 114 + + + L+ P + + +E ++ + + L Sbjct: 60 VNSLHKLLLPIASKERRLALSLPDRCGYVMTMDVAGFTRSRKESREVVAWQLRKLLP-GI 118 Query: 115 DSLRFDYSEDSLSPA----YNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPF 170 L FDY + V A + + L TL ++ + + + R + Sbjct: 119 ADLHFDYQVLKRTGGGKAHLLVVAMEKQALDRYETLFQKAGFILHTVGFFGLNIYRHWRY 178 Query: 171 -LPSHQQCLAWRDNEQWLWATRYSWGRKLAVGMTSA-KELAAALSVDPESVAICGEGGFD 228 L + NE + Y + ++ L VA C F Sbjct: 179 RLDPEGDAILLAMNEDGIIVQTYRDSVLSYYRAGAVGSRISHQLQELHRIVAGC-AQDFS 237 Query: 229 P 229 P Sbjct: 238 P 238 >UniRef50_Q2LVK0 General secretory pathway protein L n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LVK0_SYNAS Length = 509 Score = 66.9 bits (162), Expect = 5e-10, Method: Composition-based stats. Identities = 26/199 (13%), Positives = 60/199 (30%), Gaps = 20/199 (10%) Query: 5 IWQIGLHLQQQEAVAVAIV---RGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLP 61 IG+ + AV++ + K + + L+ DG Q+L Sbjct: 3 KKTIGIDIGTACLKAVSLTFDYKSRK--SIAASALIDLDA---ADGLEQALQKL------ 51 Query: 62 WSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDY 121 ++ + + + + PA R+ P E+ ++ M + +++ D Sbjct: 52 FTDKHFKEGECVFSIPAGSCSFRNLSLPFT--EEKTIDEIITYEMEPHIPDPIETVLVDS 109 Query: 122 SE---DSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCL 178 S AA+ +++ + A + + V A+ L + + Sbjct: 110 LPPRHTPESTTVLAAAARKQDVQERVRYAAGIGMAVVDTDAVPIAM-NLLEKNIPNASGI 168 Query: 179 AWRDNEQWLWATRYSWGRK 197 A + G Sbjct: 169 LLDIGAHASVAVFFQSGSI 187 >UniRef50_C8W184 Tfp pilus assembly protein ATPase PilM-like protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W184_DESAS Length = 332 Score = 66.5 bits (161), Expect = 8e-10, Method: Composition-based stats. Identities = 36/285 (12%), Positives = 81/285 (28%), Gaps = 39/285 (13%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLEN-DIIKDGRIVDAQQLAKTLLPWSREL 66 +G+ ++ + + K +Q + + L DI K G D+ +A R Sbjct: 21 VGIDWGAEKVRSAVLNYKGK-ISVQGLYSINLAERDIKKFGSQDDSWTVAALAQMADRLD 79 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL 126 ++L + R P L ERE + + + + + + Y Sbjct: 80 ITDELVVLGLEVPQISCRHIKIP--ILPERELNGAIKWEVDKYYQEKAEYITYTYLVLGQ 137 Query: 127 SPA-------YNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLA 179 + ++ + ++ + ++++ I + AL L Sbjct: 138 IQEKKNKFYNVLLIVINNEIVDKYRSIFQAAGLNLAKIDLPSLALWNLYKEDNGKNIALV 197 Query: 180 WRDNEQWLWATRYSWGRK----LAVGMTSAKELAAA----------LSVDPESVAIC-GE 224 + + L + + S + L V P I G Sbjct: 198 F-MSSNVLHILIMQYNQIYFSRSLPVFDSHNIVEQLELTFQYLEHFLPVPPVQAVIISGT 256 Query: 225 GGFDPWEAVSVRQPPLPPPGGD------------FAIALGLALGK 257 G + + + + + + +A+GLAL Sbjct: 257 GNYSDLAVLIKEKINIEVKSAEAVLCEGEIVNHGYELAIGLALRS 301 >UniRef50_Q01NT7 Fimbrial assembly family protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NT7_SOLUE Length = 439 Score = 65.8 bits (159), Expect = 1e-09, Method: Composition-based stats. Identities = 31/246 (12%), Positives = 73/246 (29%), Gaps = 30/246 (12%) Query: 8 IGLHLQQQEAVAVAIVRGAKECF------LQRWWRLPLENDIIKDGRIVDAQQLAKTLLP 61 +G+ + + L+ + + P A+ A+ Sbjct: 20 VGIEIGATDLEVAVTRVRPAGIRVLGRLTLENYAQRP------------AAEWGAEYTRF 67 Query: 62 WSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDY 121 +R + P + R P ++ + E + + + + + + Sbjct: 68 LKASGSERISATVLLPRREVIVRQVALPGVASKDIE--GAIRFQLDSLHPYGDEDVVWGW 125 Query: 122 SEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLAWR 181 S + + V + + ++L E + VS+ T A+A+ + Sbjct: 126 SPLAYG-SVLVGITRRVVVDRYVSLFEEAGIAVSSFTFSAAAVHAAIRLNG------IAE 178 Query: 182 DNEQWLWATRYSWGRKLAVGMT-SAKELAAALSVDPESVAICGEGGFD--PWEAVSVRQP 238 + ++ +R + G G + S +A + P+ A P A + Sbjct: 179 LSAGFVALSRTAAGGVEVYGESRSKPVFSAEFDLAPQRAAALALSELRLAPDTASRTLEE 238 Query: 239 PLPPPG 244 LP P Sbjct: 239 ILPKPD 244 >UniRef50_B9M0Z1 Tfp pilus assembly protein ATPase PilM-like protein n=1 Tax=Geobacter sp. FRC-32 RepID=B9M0Z1_GEOSF Length = 290 Score = 65.0 bits (157), Expect = 2e-09, Method: Composition-based stats. Identities = 16/159 (10%), Positives = 42/159 (26%), Gaps = 9/159 (5%) Query: 19 AVAIVRGAKECFLQRWWRLPLENDI----IKDGRIVDAQQLAKTLLPW-SRELPQRHHIM 73 + L + P+ +D+ +K+ +++ + R L + I Sbjct: 1 MAVVDGSRNSLSLAAYNATPIPHDLLKFGMKEQNVLNPSAFVGIIRDAYLRLLTKETVIS 60 Query: 74 LAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSLSP----A 129 L+ P + + + E + + + + DY + Sbjct: 61 LSLPETTGRVMLVDIETRFKSKEEGKEIIRWKLKKNFSFNLSETHLDYQLLEEKDDGAMS 120 Query: 130 YNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFL 168 V+ + L + + I + R Sbjct: 121 LLVSIIAKPVITQFEELFLQAGLEPKFIDFTGFNVYRLF 159 >UniRef50_D1Y3M7 Putative uncharacterized protein n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y3M7_9BACT Length = 306 Score = 64.6 bits (156), Expect = 3e-09, Method: Composition-based stats. Identities = 43/241 (17%), Positives = 72/241 (29%), Gaps = 15/241 (6%) Query: 19 AVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELPQRHHIMLAFPA 78 ++R L ++PL + ++ GR+ + L L + + P+ Sbjct: 28 YAELLREGGRARLVNADKIPLPDGLVSHGRLANGAALGAFLRKKLAFRWGKLPFAVGIPS 87 Query: 79 SRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYS-----EDSLSPAYNVT 133 + L R F P+ L E A ++ + D FD T Sbjct: 88 ADCLFRLFSLPAADLEEAR--ASMTWCFSDYFPFDFGEALFDLCEVAAPPRGGRLNLVGT 145 Query: 134 AAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLAWRDNEQWLWATRYS 193 A ++ L R V A P A R + + ++ L E L Sbjct: 146 ACAKAQILPFLESLRAPRARVFAAEPQIVASTRAFASVVAEERFLLAAKREDSLHCAFVC 205 Query: 194 WGRKLAVGMTSA--------KELAAALSVDPESVAICGEGGFDPWEAVSVRQPPLPPPGG 245 G L + ++ A ++ E VA G P P+ P G Sbjct: 206 EGNGLVFRSVALPAEEFAWSSQICAEINRTLEYVAENFGGAAPPVYIAKDASAPVALPPG 265 Query: 246 D 246 D Sbjct: 266 D 266 >UniRef50_C0QLU1 Putative general secretion pathway protein L n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QLU1_DESAH Length = 477 Score = 64.2 bits (155), Expect = 4e-09, Method: Composition-based stats. Identities = 29/190 (15%), Positives = 56/190 (29%), Gaps = 13/190 (6%) Query: 4 KIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPL----ENDIIKDGRIVDAQQLAKTL 59 K +GL + AV + + K + + + + + Sbjct: 2 KRTILGLDIGNCSIKAVVVEKQLKGFSVLKSLVINFDDFAPQESSPETETESPLFQKAIS 61 Query: 60 LPWSRELPQRH-HIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLR 118 + P+ + +A P+S R+ P S + Q L +A L + Sbjct: 62 TLVEKIDPRDIATVAIALPSSSVSFRNITLPFRSKKKIRQ--VLEFELAANLPLADKRYV 119 Query: 119 FDYSEDSL----SPAYNVTAA-QSKELATLLTLAERLRVHVSAITPDAS-ALQRFLPFLP 172 D+++ +TA+ L T + + IT A + L Sbjct: 120 SDFTDPGRAEKTDENTLLTASIPDNILNAYFTPLGEKGLKPALITIQGYIAAEYILAVED 179 Query: 173 SHQQCLAWRD 182 +Q W D Sbjct: 180 KEKQDALWID 189 >UniRef50_Q1D9F0 Putative general secretion pathway protein L n=2 Tax=Cystobacterineae RepID=Q1D9F0_MYXXD Length = 533 Score = 63.9 bits (154), Expect = 5e-09, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 52/188 (27%), Gaps = 22/188 (11%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELP 67 +GL L V + K + + + A L + +LP Sbjct: 5 LGLDLGSHAVKGVVLEAKTKTHTTHGFAE------VRRAQEGERADTLRAAVQELLGQLP 58 Query: 68 QRH--HIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDS 125 + I++A P S P A L + +L D + +DY Sbjct: 59 PGNVDQIVIALPGPALTTHSLSLPFSDAR--RIEATLPFEVGSQLPFDISDVVYDYQVVG 116 Query: 126 LSPA--------YNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQC 177 L V + +ELA LL L L+V +T Q Sbjct: 117 LKDGEGKEKASDLLVGVVRKEELAELLALLSELKVDPRIVTHPGLTYQNLFQ----QHPG 172 Query: 178 LAWRDNEQ 185 L E Sbjct: 173 LFQGTGEG 180 >UniRef50_A5GC15 General secretion pathway protein L n=5 Tax=Geobacter RepID=A5GC15_GEOUR Length = 445 Score = 63.9 bits (154), Expect = 5e-09, Method: Composition-based stats. Identities = 50/281 (17%), Positives = 84/281 (29%), Gaps = 51/281 (18%) Query: 10 LHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELPQR 69 + +++ E V + E R PL + L + L ++ P Sbjct: 6 VEIKRNELVFATFRKKRGELSFVEAARHPL----------GQEESLPQLLEEFAASAPAE 55 Query: 70 HHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSLSPA 129 ++LA P+++ R P + + L +D D L F+ Sbjct: 56 RRVILAIPSNQLFMRELELPLSDRRKIRELLPLELKGETA--VDTDQLMFEAVPLEEGK- 112 Query: 130 YNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLP-------FLPSHQQCLAWRD 182 A+ L + L + +T Q +P + + LA Sbjct: 113 VLAVWAKRHALEDKIRLMTGKGLEPEIVTASLFNWQCLIPTEVESATVAITDGESLAVFR 172 Query: 183 NEQWLWATRYSWGRKLAVGMTSAK--ELAAALSVDPESVAICGEGGFDPWEAVSVRQ--- 237 N + L+ + G A + E+ L+VD I GG A S Sbjct: 173 NGKPLYFRPMTSGEPDAEVTKTLAALEIGKGLTVD----RIFSHGGRSQQAASSNASADQ 228 Query: 238 -----PPLPPPG-----------------GDFAIALGLALG 256 PPLP G G +A+A +A G Sbjct: 229 ETSPFPPLPVNGEFAEAFAGDTNSARDLAGAYAVARAIATG 269 >UniRef50_C0QUJ1 Putative uncharacterized protein n=1 Tax=Persephonella marina EX-H1 RepID=C0QUJ1_PERMH Length = 317 Score = 63.5 bits (153), Expect = 6e-09, Method: Composition-based stats. Identities = 26/181 (14%), Positives = 56/181 (30%), Gaps = 26/181 (14%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLP-WSREL 66 +G+ L + A + + A + + + D ++ L + Sbjct: 22 VGIQLDKNFARVAVLEKTAGHFSI--------PIMPFELSILEDKEESGHLLKEELEKRD 73 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQ--TAWLSGTMARELDMDPDSL----RFD 120 +++++ P S TL ++ P MS E E+ + D SL +D Sbjct: 74 IHVKNVVVSIPISSTLFKTIKLPKMSPKEIEEAVEWNIRE--------DIKSLKGKTIYD 125 Query: 121 YSEDSLSPAYN---VTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQC 177 Y S V ++ +++ + + + I + AL Sbjct: 126 YDIISEDKDMLTVIVVISKIEDIENVQEILGYAGMEADIIDSEGIALLNLAELRKEKDPK 185 Query: 178 L 178 L Sbjct: 186 L 186 >UniRef50_B9Y7Z5 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y7Z5_9FIRM Length = 474 Score = 63.5 bits (153), Expect = 7e-09, Method: Composition-based stats. Identities = 26/180 (14%), Positives = 57/180 (31%), Gaps = 8/180 (4%) Query: 10 LHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELP-Q 68 LH+ Q+ AV V + +QR + ++ +G I D + A+ EL + Sbjct: 4 LHIMQRHAVVVWGKAKKHKLEVQRTHSCAIPEGLLINGFIQDEEAFAQWAKTMVSELGLK 63 Query: 69 RHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL-- 126 + + ++ + R P + E+ + + AR++ + DY+ Sbjct: 64 GKGVTVIADSTAVIYRQIETPKLKAKALEKNLYFNL--ARQIG-NITENTVDYAILPQAE 120 Query: 127 -SPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRF-LPFLPSHQQCLAWRDNE 184 T + + + AL + + +W +E Sbjct: 121 NGSESLTVVVPQSYGDTYSKALKAAGLKPQRMITSTLALIQAGMRLQEEKTAIYSWCSDE 180 >UniRef50_C4L4L8 Fimbrial assembly family protein n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L4L8_EXISA Length = 523 Score = 63.5 bits (153), Expect = 8e-09, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 49/139 (35%), Gaps = 6/139 (4%) Query: 33 RWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELPQRH--HIMLAFPASRTLQRSFPRPS 90 R + L D DG+I+D + R+L R +A + L R PS Sbjct: 32 RSASVQLAKDAYGDGKILDETAFSLAFDELCRKLKVRRGMTCAIALDETEVLSRKVEIPS 91 Query: 91 MSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSLSP---AYNVTAAQSKELATLLTLA 147 + E +L + + + D + FDY + A + +L Sbjct: 92 SIPKD-EIRGYLFMEIGSSIILPFDDVSFDYEVLGEDGVKTDVMLHAVSIELTKSLRAYM 150 Query: 148 ERLRVHVSAITPDASALQR 166 ++ + + ITP + A+ Sbjct: 151 KKRGLALKKITPRSVAVAN 169 >UniRef50_Q24UU7 Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense Y51 RepID=Q24UU7_DESHY Length = 348 Score = 63.1 bits (152), Expect = 9e-09, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 32/124 (25%), Gaps = 10/124 (8%) Query: 56 AKTLLPW-SRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDP 114 + L W + + + + R P MS + E+ LS + + ++ Sbjct: 43 SPALKSWLRKNKVSVKKLGITLSCPGVITRMVTLPQMSNKDLEK--LLSEQVDQYFTLNI 100 Query: 115 DSLRFDYSEDSL-------SPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRF 167 DY + A E L E + A L R Sbjct: 101 SDYVVDYRILEKVQEEDQVRLRVLLVAVPLDEWEKQWKLWESIGFAPKVADFSADCLCRL 160 Query: 168 LPFL 171 L Sbjct: 161 YHRL 164 >UniRef50_B0MQV2 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MQV2_9FIRM Length = 553 Score = 62.7 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 27/250 (10%), Positives = 77/250 (30%), Gaps = 16/250 (6%) Query: 10 LHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLA-KTLLPWSRELPQ 68 + + ++ V + + +E ++ +G I D +A + + + + Sbjct: 4 IDITDRQIKLVRGTSQGSKIKIDEVDFREIEKGLVSNGYIADVPLVAAEIIDIINTRAIK 63 Query: 69 RHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSLSP 128 +++ +S L + P + TA + + + + + Y+ + Sbjct: 64 EKDTIVSISSSSILYKELMLPKP--KKISNTAAIEAMIGSNMGIS-NDYNISYTIVGETV 120 Query: 129 A--------YNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQ---QC 177 TA + + + L + + + A+ +A+ R + P Sbjct: 121 DENKNPLIKVLATACPQRLVDGYVKLFTHMGLSLKAVNISNNAISRLIQNTPKMSGYMPL 180 Query: 178 LAWRDNEQWLWATRYSWGRKLAVGMTSAKELAAALSVDPESVAICGEGGFDPWEAVSVRQ 237 L + ++++L Y + A + + + F ++ R+ Sbjct: 181 LLVQIDKEFLNINLYEDNVLSFSRYFKI-DPADYNNAEDYVNQAIYDNLFRMFQFFQSRK 239 Query: 238 PPLPPPGGDF 247 P F Sbjct: 240 DMKPIKEMMF 249 >UniRef50_B8HI66 Tfp pilus assembly protein ATPase PilM-like protein n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HI66_ARTCA Length = 350 Score = 62.7 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 21/181 (11%), Positives = 50/181 (27%), Gaps = 17/181 (9%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRI--VDAQQLAKT 58 MA K+ IG+ + + + +PL+ +I G I + + +A Sbjct: 1 MAEKV--IGIDFGSTGLKLAEVSIEKGAVTVVKQAYMPLDPGVISGGGIKADNVELVASE 58 Query: 59 LLP-WSRELPQRHHIMLAF-PASRTLQRSFPRPSMSLGERE--QTAWLSGTMARELDMDP 114 L + ++ A+ P + + L P Sbjct: 59 LKAFLAANKFTSKDAVMGINSAADVYVNRAITPWHEPKNFQTALGFDIIADDGLLLGAPP 118 Query: 115 DSLRFD------YSEDSLSPAY--NVTAAQSKELATLLTLAERLRVHVSAITPDASALQR 166 + D +++ + + K + L + + ++ + A R Sbjct: 119 -EVIIDAVVFKEFTDANEKRKIDALLIGVGQKLVELQLEVLHKAGLNAAGADLAGMASLR 177 Query: 167 F 167 Sbjct: 178 A 178 >UniRef50_Q3A7K3 MshA biogenesis protein MshI-1 n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A7K3_PELCD Length = 318 Score = 62.3 bits (150), Expect = 1e-08, Method: Composition-based stats. Identities = 29/201 (14%), Positives = 54/201 (26%), Gaps = 31/201 (15%) Query: 86 FPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD-YSED-----SLSPAYNVTAAQSKE 139 F + + E + + +D + D + + V A + Sbjct: 81 FQVAPPPVPDAELRDAVRWQVKDLIDYPLEEAVVDVFRVGADARREGTRNAYVVAVKQAV 140 Query: 140 LATLLTLAERLRVHVSAITPDASALQRFLPFLP------------SHQQCLAWRDNEQWL 187 + L L R+ V A+ L+ LP + + + Sbjct: 141 VRQQLDLLRHARLKVDAVDIPELCLRNLAALLPEDPRGVSLLYLGADSGVVIVCRGGRLQ 200 Query: 188 WATRYSWGRKLAVGMT---------SAKELAAALSVDPESVAICGEGGFDPWEAVSVRQP 238 A +G T +E + L++D + E F ++ Sbjct: 201 LARDIPFGFTALSPETGESQPGNIEGLQERLSLLALDIQRSLDFYESSFRQTPVAALYLL 260 Query: 239 ----PLPPPGGDFAIALGLAL 255 PLP D LG A+ Sbjct: 261 PAAKPLPDLLPDLQSRLGTAV 281 >UniRef50_C6VT50 Cell division protein FtsA n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VT50_DYAFD Length = 448 Score = 61.9 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 11/89 (12%), Positives = 30/89 (33%), Gaps = 8/89 (8%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVR---GAKECFLQRWWRLPLENDIIKDGRIVDAQQLAK 57 MA +G+ + + VA + + +P+ + +G + + +Q+ Sbjct: 1 MAHDKIVVGVDIGSTKITVVAAQGSANRRNNIEILGFSEVPVPAGAVVNGSVENIKQVGS 60 Query: 58 TLLPWSRELPQRHH-----IMLAFPASRT 81 + E R + ++F + Sbjct: 61 AIKEALAEAGSRSDLDIGIVNVSFSGTHV 89 >UniRef50_Q2BKX0 Tfp pilus assembly protein ATPase PilM-like n=1 Tax=Neptuniibacter caesariensis RepID=Q2BKX0_9GAMM Length = 305 Score = 61.9 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 22/174 (12%), Positives = 47/174 (27%), Gaps = 17/174 (9%) Query: 12 LQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELPQRHH 71 L I A + L + +P N + + +++ + + Sbjct: 16 LTGDGVSLAHIKNAALQPELDACFHIPTANP------LKEPKKIGDAVSE---QGLAGSQ 66 Query: 72 IMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSED------S 125 ++ P + + E L + + D ++ D+ E Sbjct: 67 AVIVLPEGS--YQVLLVEKPDVPNEELAEALRWRIKDMVSFDIETAVIDFVELPDDAYRG 124 Query: 126 LSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLA 179 S AQ + L E + + + + AL L + LA Sbjct: 125 RSSMVYAVVAQQDNVDELTDWCEEIGLEPAIVDVPEFALLNLTEDLADSEAGLA 178 >UniRef50_Q6M9N6 Putative uncharacterized protein n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6M9N6_PARUW Length = 525 Score = 61.9 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 48/181 (26%), Gaps = 23/181 (12%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELP 67 IGL L ++ L+ + PL +L + Sbjct: 11 IGLELNSNSIKGAEVIERFGRPILKELFTTPL-----------------NSLSNVKQLYI 53 Query: 68 QRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSED-SL 126 Q + + L RS P + E A L L D Sbjct: 54 QHPILTTGLDGMQVLLRSLTIPLTKTKDIE--ATLHFQAEPLLPYPIDQSLLSSQVIKQE 111 Query: 127 SPA--YNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFL-PFLPSHQQCLAWRDN 183 + + A + L T L + ++ +AL +F +LP Q L Sbjct: 112 NDETKLLLFATKKDLLQTHLEQWLSFGIESEKVSCTQAALGQFSKQYLPHDQTFLIIHFE 171 Query: 184 E 184 E Sbjct: 172 E 172 >UniRef50_C8X4Q2 Tfp pilus assembly protein ATPase PilM-like protein n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X4Q2_DESRD Length = 621 Score = 61.9 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 27/178 (15%), Positives = 57/178 (32%), Gaps = 17/178 (9%) Query: 2 AFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLP 61 IG+ +Q V + + + +P +++ +D+ + L Sbjct: 53 FKPKETIGVEIQDTHLNVVRMAQSGHGWEAIQALTIP-----MREEMALDSPEFRSFLKS 107 Query: 62 WSR--ELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRF 119 + E ++ H+ AS+ P M G + R+ D + D + F Sbjct: 108 QLQSIEGIKKAHVWAMLSASQGEIWHTKIPLMKKG---LANAVFWAAKRDNDFEEDKVVF 164 Query: 120 DYSEDSL------SPAYNVTAA-QSKELATLLTLAERLRVHVSAITPDASALQRFLPF 170 DY + + + + + L + + V + IT A +LQ Sbjct: 165 DYRIQNQIADKDVKKYWAMVSTFPKNTVKNLKDVFSKSGVDLEGITLPAFSLQNLFTH 222 >UniRef50_B2V6U3 Tfp pilus assembly protein ATPase PilM-like protein n=3 Tax=Sulfurihydrogenibium RepID=B2V6U3_SULSY Length = 316 Score = 61.5 bits (148), Expect = 3e-08, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 55/167 (32%), Gaps = 18/167 (10%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELP 67 G+ L A + + ++ + +P E + D +Q L Sbjct: 23 TGIELDTDYARVSILEKDGEDLI---FSIMPFEIQLTGDN-----EQDGFILRQELERRG 74 Query: 68 QRHHIM-LAFPASRTLQRSFPRPSMSLGE--REQTAWLSGTMARELDMDPDSLRFDYSED 124 I + P S L ++ P +S E + + +DYS Sbjct: 75 LNVKIANFSIPVSAVLIKNLKLPKVSEKEMIDAIEWNIKEDIENL----KAETVYDYSII 130 Query: 125 SLSPAYN---VTAAQSKELATLLTLAERLRVHVSAITPDASALQRFL 168 + V A++K++ +L +AE ++ V I P A AL Sbjct: 131 HEDKDFYDIVVVIAKNKQINRVLEVAENAKIEVDIIEPSAMALLNLA 177 >UniRef50_D2L7F4 Tfp pilus assembly protein ATPase PilM-like protein n=2 Tax=Desulfovibrio RepID=D2L7F4_9DELT Length = 687 Score = 60.4 bits (145), Expect = 5e-08, Method: Composition-based stats. Identities = 26/169 (15%), Positives = 50/169 (29%), Gaps = 11/169 (6%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELP 67 +G+ + Q + V I + P+ + G L +TL P Sbjct: 59 VGVDISQAQLTCVKIRGQDAGFEVLGTAIAPVPEGVAP-GSPEFVALLRRTLSDLCGPGP 117 Query: 68 QRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL- 126 A A R + P + + + T +++ D S+ FD+ Sbjct: 118 LPRIWAAAQSA-RANLQFVTIPKVPSR--QVDNAVFWTAKKDMAFDEGSVIFDFERRGEV 174 Query: 127 ------SPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLP 169 A + +A + R ++ +T + A Q F Sbjct: 175 AEKGTTRIGAMAYTAPREAVAVVRADFARAGFPLAGLTLEPFAHQNFFR 223 >UniRef50_B8FD58 Putative uncharacterized protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FD58_DESAA Length = 745 Score = 60.4 bits (145), Expect = 6e-08, Method: Composition-based stats. Identities = 25/181 (13%), Positives = 50/181 (27%), Gaps = 20/181 (11%) Query: 17 AVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQ-LAKTLLPWSRELPQRHHIMLA 75 A I +P + + D L +L + + A Sbjct: 76 VKASQISEKR--WRTMGRKIVPYPVGV--NPSSPDFAAFLKSSLSDFC--SGSSVQVWAA 129 Query: 76 FPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL--SPAYNVT 133 P+ R P + E + + T +E D + FD+ + Sbjct: 130 VPSQSVDIRRIFVPKVGRDELPEA--VFWTFKKESPFDDAKVVFDFQVEGEVRDSGVLKI 187 Query: 134 A-----AQSKELATLLTLAERLRVHVSAITPDASALQRFLPF----LPSHQQCLAWRDNE 184 A A E+ L L ++ ++ +T +Q P + + +E Sbjct: 188 AVIAYTADRGEVNGLRDLFDKAGYPLAGLTAPPFFVQNLFRSGWLRAPDDAVAVLYVGDE 247 Query: 185 Q 185 + Sbjct: 248 R 248 >UniRef50_Q02D04 Putative uncharacterized protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02D04_SOLUE Length = 295 Score = 60.0 bits (144), Expect = 7e-08, Method: Composition-based stats. Identities = 19/144 (13%), Positives = 43/144 (29%), Gaps = 9/144 (6%) Query: 37 LPLENDIIKDG----RIVDAQQLAKTLLPW--SRELPQRHHIMLAFPASRTLQRSFPRPS 90 LPL+ + ++D + + S+ +R + L P Sbjct: 39 LPLKPGTLTVSPLKENVLDPDEFVMAVRSLAGSQNARKRKDVALILPDFSARISVLDFDQ 98 Query: 91 MSLGEREQTAWLSGTMARELDMDPDSLRFDY-SEDSLSPAY--NVTAAQSKELATLLTLA 147 +EQ + + + R + D +S Y ++ V A + ++ Sbjct: 99 FPKDAKEQASLIRFRLKRSVPFDVESAALSYWAQPGEKGKVDAVVVLAPLEIVSRYEAPF 158 Query: 148 ERLRVHVSAITPDASALQRFLPFL 171 ++ +T + A P Sbjct: 159 RTAGMNPGLVTTSSLAALELAPEA 182 >UniRef50_B8FQA6 Tfp pilus assembly protein ATPase PilM-like protein n=1 Tax=Desulfitobacterium hafniense DCB-2 RepID=B8FQA6_DESHD Length = 353 Score = 59.6 bits (143), Expect = 9e-08, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 36/118 (30%), Gaps = 10/118 (8%) Query: 59 LLPWS-RELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSL 117 L W+ +E + A + R P +S + E+ L+ + + ++ Sbjct: 72 LKQWADKERIPLKKLNYALSCPGVITRMITLPILSYKDLEK--LLTEQVDQYFTLNISDY 129 Query: 118 RFDYSEDS-------LSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFL 168 DY + A E + + E+L V A +L R Sbjct: 130 LVDYRILERIKEEDQERLRVLLVAIPFSEWSKQWQIWEQLGVTPKVTDFAADSLCRLY 187 >UniRef50_D0RPC5 Fimbrial assembly protein n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RPC5_9RICK Length = 584 Score = 59.6 bits (143), Expect = 9e-08, Method: Composition-based stats. Identities = 22/201 (10%), Positives = 57/201 (28%), Gaps = 16/201 (7%) Query: 4 KIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRI-VDAQQLAKTLLPW 62 +G+ + E + +V K ++ + + I KD I + L+ + Sbjct: 26 GEKILGVAFKDNEIQLIELVYKKKIWQVKDYTYQQI-AGIGKDQDIYSASTYLSDQIKNC 84 Query: 63 SREL-PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARE--LDMDPDSLRF 119 + + + + T + P M + +T L G + + Sbjct: 85 LDSIDTKTKDVAITLDKLSTTFYNLQIPLMDPKDLAETVSLGGFWEQFDETPETLEEFET 144 Query: 120 DYSEDSLS-----PAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPF---- 170 Y S + + + K + + + ++ I + ++ L Sbjct: 145 SYQIISSNEELGVMNVALVTIEKKLVEAYVNIFRLAGLNPIIIDINPASQINALYASLGK 204 Query: 171 --LPSHQQCLAWRDNEQWLWA 189 S + + +L Sbjct: 205 EGFDSPVAIFNYSKDNSYLTV 225 >UniRef50_B8FQ80 Fimbrial assembly family protein n=2 Tax=Desulfitobacterium hafniense RepID=B8FQ80_DESHD Length = 489 Score = 58.8 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 29/199 (14%), Positives = 64/199 (32%), Gaps = 16/199 (8%) Query: 1 MAFKIWQIGLHLQQQEAV---AVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAK 57 M + ++ + L E + + ++ PL +IK G+++ Sbjct: 1 MPTEQGRVCVELTDHELRWLWYIQKGKDKGSLAPAQFEITPLPKGLIKQGKVLHLDTFLS 60 Query: 58 TLLPWSRE------LPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELD 111 L + + LP+ I + P R + P + +T L E+ Sbjct: 61 ILKGYLEQYKIDFQLPRNPKIDIGLPLQNQFIREYHLPWVKKRN--RTGLLRYLAEEEIP 118 Query: 112 MDPDSLRFDYSEDSLSP-----AYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQR 166 + + L +DY + ++ ++ L+ ++ + ++ + A R Sbjct: 119 IPEEELVYDYFLEEEKGPSRRLRVILSGIRNSVLSPVIFCFRKAGFEINKVCFSQLAWGR 178 Query: 167 FLPFLPSHQQCLAWRDNEQ 185 L F P D Q Sbjct: 179 VLGFGPEGNTLFLREDEGQ 197 >UniRef50_Q3JD25 General secretion pathway protein L n=2 Tax=Nitrosococcus oceani RepID=Q3JD25_NITOC Length = 373 Score = 58.8 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 15/106 (14%), Positives = 35/106 (33%), Gaps = 8/106 (7%) Query: 61 PWSRELPQRHHI-MLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRF 119 W + L + + + P + L +S PS + Q L+ M R + + + Sbjct: 88 QWDKILGEEDTVLVFRLPPRQVLSKSLVLPSAAEENLRQ--VLAFEMERHTPFTANQVYY 145 Query: 120 DYSEDSLSPA-----YNVTAAQSKELATLLTLAERLRVHVSAITPD 160 D++ + A ++ + L L + + + Sbjct: 146 DFAIRERNLAARRITVSLIVVPRRILDEWLERLSHWGLQPAVVDVA 191 >UniRef50_Q1IRC1 Putative uncharacterized protein n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IRC1_ACIBL Length = 546 Score = 58.5 bits (140), Expect = 2e-07, Method: Composition-based stats. Identities = 22/215 (10%), Positives = 53/215 (24%), Gaps = 14/215 (6%) Query: 1 MAFKIWQIG-----LHLQQQEAVAVAIVRGAKECFLQRWWRLP--LENDIIKDGRIVDAQ 53 M Q G + + + A + + +P + ++ + DA Sbjct: 1 MLKGNNQGGRPLLACEITRTQVFATRWAEKTTGVEVLQVRTIPGGVSPNLTSQN-VSDAG 59 Query: 54 QLAKTLL-PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDM 112 L + + + L P + ++ ++E A + + + L Sbjct: 60 ALKSVVADALQASGARTKDVTLIVPDAAVRVALLDFDTLPEKKQEADAVVRFRLKKSLPF 119 Query: 113 DPDSLRFDY--SEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPF 170 + D Y + + V + L + + P A L Sbjct: 120 EVDRAAISYHAQPNGTTLRVLVCVMLNSVLHEYESAVRDAGFLPGVVLPSTLA---ALGN 176 Query: 171 LPSHQQCLAWRDNEQWLWATRYSWGRKLAVGMTSA 205 + + + + GR Sbjct: 177 VSVDAPTMVVKIADGTTTIAILDQGRLQLYRTLDH 211 >UniRef50_C1F522 Putative uncharacterized protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F522_ACIC5 Length = 303 Score = 58.5 bits (140), Expect = 2e-07, Method: Composition-based stats. Identities = 23/158 (14%), Positives = 40/158 (25%), Gaps = 10/158 (6%) Query: 34 WWRLPLENDIIKDG----RIVDAQQLAKTLL-PWSRELPQRHHIMLAFPASRTLQRSFPR 88 + PL I G V A L + + + + ++ + P + Sbjct: 44 FHTAPLPPGAIAAGLKTPNCVQAAALTEAVRSALDQTEARTRNVTVIVPDATARIFLLDF 103 Query: 89 PSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL---SPAYNVTAAQSKELATLLT 145 S+ ERE L + + + + D Y V A A + Sbjct: 104 DSLPSREREALPILRFRLRKLVPFEVDDAAISYQILQQLPAQVRTLVVAMPGPVRAEYES 163 Query: 146 LAERLRVHVSAITPDASALQRFLPFLPSHQQCLAWRDN 183 + A+ A L L R Sbjct: 164 VIRAAGYEPGAMMTSTLASLAALQSTEP--ALLVNRSG 199 >UniRef50_B4D1D7 Tfp pilus assembly protein ATPase PilM-like protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1D7_9BACT Length = 345 Score = 58.5 bits (140), Expect = 2e-07, Method: Composition-based stats. Identities = 28/185 (15%), Positives = 49/185 (26%), Gaps = 22/185 (11%) Query: 1 MAF-KIWQIGLHLQQQEAVAVAIVRGA-KECFLQRWWRLPLENDIIKDGRIVDAQQLAKT 58 MA IG+ L + +V + + L + + A LA+ Sbjct: 1 MAKAPNSVIGVDLGRYSLKSVLLQKKGSNRYVLTNFASQVVTAPA------ETADALAQQ 54 Query: 59 LLPWSRELPQRHHI-MLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSL 117 L +E+ +A L R +P + L+G L+ D Sbjct: 55 LKALFKEMGGSAKACAVAVSTPDALIRIIEQPETPPELLREALRLNGMA--LLNQDCREF 112 Query: 118 RFDYSEDS-----------LSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQR 166 D + Y V ++ + + E VSA+ Sbjct: 113 VLDCDRIAPLGSPTELTANGRKRYLVGGLPRSQVNLIGSAVEHAGTDVSAMQLAPICAFN 172 Query: 167 FLPFL 171 F Sbjct: 173 AFEFA 177 >UniRef50_P31768 Competence protein A n=18 Tax=Haemophilus influenzae RepID=COMA_HAEIN Length = 265 Score = 58.1 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 44/122 (36%), Gaps = 8/122 (6%) Query: 59 LLPWSRELPQRH---HIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPD 115 L + + + + PA T + P + L +E + +EL + + Sbjct: 50 LQQLKTQYQGKTFPLQFVASIPAHLTWSKVLMLPQV-LNAQECHQQCKFVIEKELPIFLE 108 Query: 116 SLRFDYS--EDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPS 173 L FDY VTA + T L + +++ + ++A+ R +L + Sbjct: 109 ELWFDYRSTPLKQGFRLEVTAIRKSSAQTYLQDFQP--FNINILDVASNAVLRAFQYLLN 166 Query: 174 HQ 175 Q Sbjct: 167 EQ 168 >UniRef50_D1R6G2 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R6G2_9CHLA Length = 567 Score = 57.7 bits (138), Expect = 4e-07, Method: Composition-based stats. Identities = 30/232 (12%), Positives = 65/232 (28%), Gaps = 16/232 (6%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQR-WWRLPLENDIIKDGRIVDAQQLAKTLLPWSREL 66 +GL ++ + + + + L R + L N + Q TL Sbjct: 11 LGLDIESNKLKGILLTEVKGKPSLIRILFSETLSNGSNSSFFSQETAQTINTLSA----- 65 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL 126 + +A L R P E+E + + L ++ ++++ Sbjct: 66 --NALVGVALKTDEVLIR--PLEVKLKKEQEIASIIDFQSEPLLPFPVENAIVEWTKLGT 121 Query: 127 SPA---YNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQ--QCLAWR 181 + + AA+ + L V ++ +AL F Q + Sbjct: 122 TTDGSKLTIIAARKDYVEKELAKWNTFHVEPELLSCAPAALAAFSSQFCDLSGPQLILHI 181 Query: 182 DNEQWLWATRYSWGRKLAVGM-TSAKELAAALSVDPESVAICGEGGFDPWEA 232 + A + ++L A D + E F ++ Sbjct: 182 GSSGTSCVMAEEGRVIAAQSVPRGIEQLVQAFQQDLLQDPLFKERSFASLKS 233 >UniRef50_B0MCL1 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MCL1_9FIRM Length = 483 Score = 57.3 bits (137), Expect = 5e-07, Method: Composition-based stats. Identities = 22/162 (13%), Positives = 46/162 (28%), Gaps = 9/162 (5%) Query: 12 LQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELPQRHH 71 L + +Q + L + +G I L L Sbjct: 7 LSNHRVQIAVGEAKKSKIKIQNLVQFDLREGSLINGVITSEDGLKHQLEKAWESHGISKK 66 Query: 72 IMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSLSP--- 128 I L +++ + P M+ + +T + +P+ +DY + Sbjct: 67 ISLVIDSTQIAAKLMTIPKMNKKKTLETVRKELSSIE----NPEKYVYDYRVCGMDKKSG 122 Query: 129 --AYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFL 168 A Q L + L + + V V ++ +A + Sbjct: 123 MATVLGAAVQESMLKSYLDVFAAMGVEVESVDIALNAQLKAF 164 >UniRef50_B5YEE0 Fimbrial assembly protein (PilN) n=2 Tax=Dictyoglomus RepID=B5YEE0_DICT6 Length = 463 Score = 57.3 bits (137), Expect = 5e-07, Method: Composition-based stats. Identities = 22/164 (13%), Positives = 52/164 (31%), Gaps = 12/164 (7%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTL- 59 M W G +++ K L+ + + + + + + + + + Sbjct: 1 MISIQWLNG------RLKMARVLKKGKSIELRDYQEMEIPQGDFWNRGLEEKNLVQEKIE 54 Query: 60 LPWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRF 119 + ++L F + R+ PSMSL + E + + D F Sbjct: 55 KFLKENKIKDKEVILLFESKDISIRTSEYPSMSLKDLEMA--ILDDLEEFQAFDESYNSF 112 Query: 120 DYSEDSLSPAYN--VTAA-QSKELATLLTLAERLRVHVSAITPD 160 +S + V A + T + + L + + ++ P Sbjct: 113 TFSVITQDKNKVRSVVATIPKIIIDTWENIFKNLGLTLISLEPS 156 >UniRef50_A6VM68 Competence protein A n=1 Tax=Actinobacillus succinogenes 130Z RepID=A6VM68_ACTSZ Length = 278 Score = 57.3 bits (137), Expect = 5e-07, Method: Composition-based stats. Identities = 22/132 (16%), Positives = 51/132 (38%), Gaps = 7/132 (5%) Query: 64 RELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSE 123 ++ P R + +++ + ++ P + L +E ++ T+ +EL + + L FDY Sbjct: 57 KKRPLRFNYVVSLLPNHIWCKTLILPQV-LNTQECEQQVTATIEKELPLPLEQLWFDYRS 115 Query: 124 --DSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPS--HQQCLA 179 ++ + + L + + VS + A A+ R +L L Sbjct: 116 EMLKQGMKLEISVVIQETAKSWLE--QYAPLSVSVLDNTAHAVFRAFRYLKPELPNNTLY 173 Query: 180 WRDNEQWLWATR 191 +E + A + Sbjct: 174 LYHDEHFCLALQ 185 >UniRef50_C9A711 Predicted protein n=1 Tax=Enterococcus casseliflavus EC20 RepID=C9A711_ENTCA Length = 348 Score = 56.5 bits (135), Expect = 9e-07, Method: Composition-based stats. Identities = 25/208 (12%), Positives = 55/208 (26%), Gaps = 45/208 (21%) Query: 1 MAFKIWQ---IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAK 57 M K +G+ +Q+ + + L + I KD ++ + L Sbjct: 1 MFGKKTIPRLVGIDIQKNCIRYC--TKKGDRLK---YGELVVNGTIFKDDKLRNPDSLEA 55 Query: 58 TLLPWSRELP-QRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDS 116 ++ L + +++ SR L + P M+ E+E +L + + + ++ Sbjct: 56 AFNEIAKRLGLRTMSVVITALNSRLLIKQIPIGKMN-SEKEIREYLYFELGESISLPFEN 114 Query: 117 LRFDYSEDSL-----------------------------------SPAYNVTAAQSKELA 141 FD + V L Sbjct: 115 PIFDLLILGKGNKQKVPKEKKKRANKKGEKAEPQAVVIQRNRFTINGNVPVVVTSEPILI 174 Query: 142 TLLTLAERLRVHVSAITPDASALQRFLP 169 L ++ + + A R Sbjct: 175 QLGDTLKKGGHQLMGVDCSFLAYSRMFQ 202 >UniRef50_Q1NII5 Tfp pilus assembly protein ATPase PilM-like n=3 Tax=delta proteobacterium MLMS-1 RepID=Q1NII5_9DELT Length = 310 Score = 56.1 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 30/209 (14%), Positives = 59/209 (28%), Gaps = 24/209 (11%) Query: 51 DAQQLAKTLLPW--SRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMAR 108 D Q + L W +L + ++ P F ++ E E + + Sbjct: 51 DDQARGRVLSEWVRRHQLARAPTVLTLAPGE---YGMFQVEKPAVNENELRQAVRWRLKD 107 Query: 109 ELDMDPDSLRFD-YSEDSLSPA----YNVTAAQSKELATLLTLAERLRVHVSAITPDASA 163 LD P+ D P AA+ L + + + + +S I A Sbjct: 108 FLDYSPEEAVVDVCQVPPGRPGRPSVIYAAAARRGLLQERIAVIRKAGLQLSRIEIPELA 167 Query: 164 LQRFLP----------FLPSHQQCLAWRDNEQWLWATRYSWG----RKLAVGMTSAKELA 209 L+ L + + L E + A + G R S + Sbjct: 168 LRNIAASQGEETVALLHLVADRGLLLICRGETFFLARNFEHGLQDIRTAVNQDASLGDTG 227 Query: 210 AALSVDPESVAICGEGGFDPWEAVSVRQP 238 ++++ + + F + P Sbjct: 228 ERVTLEIQRTMDFYDNQFAQAPVKRLLLP 256 >UniRef50_A3YUA4 Putative uncharacterized protein n=1 Tax=Synechococcus sp. WH 5701 RepID=A3YUA4_9SYNE Length = 324 Score = 55.8 bits (133), Expect = 1e-06, Method: Composition-based stats. Identities = 37/237 (15%), Positives = 61/237 (25%), Gaps = 19/237 (8%) Query: 7 QIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSREL 66 ++ L L V + L R+PL G L + EL Sbjct: 21 RVWLALDDDAVTVVTTKGLGQPVQLDLLRRVPLPRGACSAGDPQQVMALGDLIGDLLVEL 80 Query: 67 PQRHHIMLAF-PASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDS 125 +LA PA+ R P E A A L D Sbjct: 81 GLVGAEVLAVLPAAACAWRVVQWPFDDWPESADEALRQIDPALGLPYDLSQAYISLLPLE 140 Query: 126 LSPA-------YNVTAAQSKELATLLTLAERLRVHVSAITPD-ASALQRFLPFLPSHQQC 177 + + + + + + + + + V + + L+ P L + Sbjct: 141 GADQQDSGSCSSLLVSVPRQRVLSWIEVFDIAGVQLERLEAAQVCELRALAPLLDGAEPD 200 Query: 178 L---AWRDNEQWLWATRYSWGRKLAVGMT--SAKELAAALSVDPESVAICGEGGFDP 229 L +E+ T G S +L L I G+DP Sbjct: 201 LLEVLVVLDERGARLTLLRHGVPEYGREVKGSLSDLEDELERC-----IAYWRGWDP 252 >UniRef50_B9XBV3 Type IV pilus assembly protein PilM n=1 Tax=bacterium Ellin514 RepID=B9XBV3_9BACT Length = 356 Score = 55.4 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 28/218 (12%), Positives = 68/218 (31%), Gaps = 26/218 (11%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSREL- 66 I + L + A+ + R + LQ + + + + + L++ L + L Sbjct: 18 IAIDLGSRTTKAIHLQRKGEGFALQHYVVMDAP----IYEKSLSIELLSEHLKAVVQALD 73 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDY----- 121 + + LA + ++ R P M + + L L D FD Sbjct: 74 AKTKIVTLAIGVNDSIVRHAELPPMPVEDMRMI--LRNNTKNYLQQDLPGHVFDCHVVVA 131 Query: 122 ----------SEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITP----DASALQRF 167 + V A+ + ++ LL + + + P +AL+ Sbjct: 132 RNGAALESARAVGMQRAKVLVGGAKQQLISDLLQSIKDAGLTADQVIPGLLGPVNALELA 191 Query: 168 LPFLPSHQQCLAWRDNEQWLWATRYSWGRKLAVGMTSA 205 +P + + + + + G+ + + + Sbjct: 192 MPEAFAKEPVALVDIGFKSTTISLLNNGQLILSRVVAI 229 >UniRef50_A6FG30 Hypothetical biogenesis protein MshI n=1 Tax=Moritella sp. PE36 RepID=A6FG30_9GAMM Length = 297 Score = 55.4 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 27/195 (13%), Positives = 63/195 (32%), Gaps = 19/195 (9%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPW-SREL 66 +G+ + +Q A+ G + + L++ D +L KTL S+ Sbjct: 15 LGVFIAKQRVDICALSAGNEAIAV-------LDSSAFND-----VSELIKTLSELISKHN 62 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSL 126 Q + L + ++ + E ++ L ++ D++ FDY Sbjct: 63 LQAATCHVVLSNQ--LYQLLQIDKPNVPDDEISSSLPFIAKEFINEAIDTVVFDYFSVPN 120 Query: 127 SPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSH----QQCLAWRD 182 N+ + ++T ++ ++ + I + A Q L + Sbjct: 121 QNKINLVYCPKNLVELIVTAIQQAKLELVTIGIEELATANLFNTSADDDRKSTQMLIAQQ 180 Query: 183 NEQWLWATRYSWGRK 197 + Q + T + Sbjct: 181 DHQEINLTIIHDNQL 195 >UniRef50_Q2S971 Putative uncharacterized protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S971_HAHCH Length = 309 Score = 55.0 bits (131), Expect = 2e-06, Method: Composition-based stats. Identities = 29/183 (15%), Positives = 49/183 (26%), Gaps = 20/183 (10%) Query: 3 FKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPW 62 K +G+ ++ + ++ D A Q A L + Sbjct: 10 GKKGLVGIEVRPDGMAIAVSEPAGGQSHIRA-----------IDYLDARAAQRAGALKAF 58 Query: 63 SRELPQRHHIM-LAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD- 120 E L P RPS+ E E + + LD D D Sbjct: 59 VNERKLEKMACNLVLPPEMYALHQIERPSV--EESELREAVRWKVKDLLDYAIDDAIIDV 116 Query: 121 -----YSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQ 175 + NV A+ L L+ + + +S+I AL+ Sbjct: 117 FEYPSDALRGRPAQVNVVTARKSLLKELIRVINDSGLVLSSIDITELALRNLAQPFEEDG 176 Query: 176 QCL 178 + L Sbjct: 177 KSL 179 >UniRef50_C0GW01 Fimbrial assembly family protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GW01_9DELT Length = 617 Score = 54.6 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 31/207 (14%), Positives = 58/207 (28%), Gaps = 20/207 (9%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSREL- 66 +GL + + + L + + D VD + L ++L Sbjct: 55 MGLEILRDSLHLALSEQTRSGWRLLHASSVDIPAD-----MTVDTPEFKDFLQNQLQDLD 109 Query: 67 -PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDS 125 + + A PASR S P + G + + +E + DP F++ Sbjct: 110 PRKTAEVWFALPASRGEIWSIRVPRVKKG---MANVVYWSARKEKNFDPQQHIFNFRLGR 166 Query: 126 L-------SPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQ--- 175 + A ++++ L + IT A++L Sbjct: 167 EVDEGGVRKIQAEICLAPAEDIQKYRQLITDTGYRLRGITLPAASLDNLFQHARDDYLDK 226 Query: 176 QCLAWRDNEQWLWATRYSWGRKLAVGM 202 E YS G L + Sbjct: 227 PYAILYIGEDSSCIKFYSAGTVLFSRV 253 >UniRef50_B5JF45 Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JF45_9BACT Length = 558 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 11/100 (11%), Positives = 39/100 (39%), Gaps = 5/100 (5%) Query: 74 LAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSLSP---AY 130 + P L + P +++G+R++ ++ + + + + + Y+ Sbjct: 72 FSIPGHVALCKYLKIPQVAVGKRQKI--VAFEAKQNIPYPIEEVTWAYAVVEEDSLDFDA 129 Query: 131 NVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPF 170 + A +++ + T+ + + + + P +AL + Sbjct: 130 VIGATRTEIVETIARYSRDSEIDLRGVEPSTTALVNAFRY 169 >UniRef50_B1ZX78 Fimbrial assembly family protein n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZX78_OPITP Length = 560 Score = 53.8 bits (128), Expect = 5e-06, Method: Composition-based stats. Identities = 24/166 (14%), Positives = 61/166 (36%), Gaps = 8/166 (4%) Query: 8 IGLHLQQQEAV-AVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSREL 66 + L L A+ + L+ P+ ++ + AQ LA+ + + + Sbjct: 7 LALDLDASRLTCALFASDAQRRLHLEELGSEPVHGELASE--PAGAQDLARAVRALAARV 64 Query: 67 PQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDY---SE 123 R + +A P + + P+++ +R + + + + D + +D+ + Sbjct: 65 RHRGEVRIALPGALAFTKCVRTPAITGAKRRR--VVEFEATQNIPHALDEVWWDHWVIAP 122 Query: 124 DSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLP 169 D+ + AA+ ++ L + + P A+AL + Sbjct: 123 DAADLEILLMAAKRSAISALCAALDVPGWRLERAMPAAAALHGTVR 168 >UniRef50_Q04SY3 Actin-like ATPase n=4 Tax=Leptospira RepID=Q04SY3_LEPBJ Length = 541 Score = 53.8 bits (128), Expect = 6e-06, Method: Composition-based stats. Identities = 19/170 (11%), Positives = 47/170 (27%), Gaps = 12/170 (7%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 M + + V + + + R + + + + + L Sbjct: 1 MFIYDQFLAIDYGTSAIKGVLFQKVLGKLNILRSEIMNISHGEEDEYKH-------NILR 53 Query: 61 PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD 120 + P I+L P SR R F P ++ + + + + +++ Sbjct: 54 FINSYFPGETSIVLNLPLSRLFVREFSIPLTTVKAVRE--VIPFEVENRIPFPMETVEVT 111 Query: 121 ---YSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRF 167 + D +A EL + + + D+ +L Sbjct: 112 GNIWRIDQEKSNVIAYSAHHSELDFITAPFLGSNIVFRGLFVDSVSLASV 161 >UniRef50_Q9CLJ9 ComA n=1 Tax=Pasteurella multocida RepID=Q9CLJ9_PASMU Length = 257 Score = 53.5 bits (127), Expect = 6e-06, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 36/110 (32%), Gaps = 5/110 (4%) Query: 68 QRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSLS 127 ++H+ + A + ++ P L E E + +EL + L FDY + Sbjct: 60 RKHYFVAAISPHQIWSKTILFPH-PLSESECETQCGLLLTQELPIALSQLWFDYCAEQRQ 118 Query: 128 PAYNV--TAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQ 175 + + A Q L + V + AL R FL Sbjct: 119 QGFRLTVFALQRSIAEQYLAPLSHV--DVRVLDNVVYALLRAFQFLLPDA 166 >UniRef50_A1WZA6 Putative uncharacterized protein n=1 Tax=Halorhodospira halophila SL1 RepID=A1WZA6_HALHL Length = 479 Score = 53.5 bits (127), Expect = 8e-06, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 49/169 (28%), Gaps = 7/169 (4%) Query: 9 GLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKD-GRIVDAQQLAKTLLPWSRELP 67 G+ L + VA+ A L+R R + I G L Sbjct: 21 GMPLPSTATIGVAVAGRAVHVCLRRRSRYAYTAETIHAPGANGRRDALRAACRRL---GV 77 Query: 68 QRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSLS 127 R LA P R +R P L E A L + R L + Y S Sbjct: 78 GRSRAALALPEGRVQRRLLALP-TPLRRSEYRAVLRLHVRRALPAPAS--VWRYCLSSEH 134 Query: 128 PAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQ 176 ++ AA+ +L TL + A+ AL P Sbjct: 135 HRPHLLAARHTDLQAGQTLLRDAGLRPVALVASRDALAHAAGAPPQPLP 183 >UniRef50_C6P871 Tfp pilus assembly protein ATPase PilM-like protein n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6P871_CLOTS Length = 239 Score = 53.5 bits (127), Expect = 8e-06, Method: Composition-based stats. Identities = 10/74 (13%), Positives = 27/74 (36%), Gaps = 6/74 (8%) Query: 93 LGEREQTAWLSGTMARELDMDPDSLRFDYSEDSLSPA-----YNVTAAQSKELATLLTLA 147 + + E + L + + + + D DY + + AA ++ + L Sbjct: 4 MKDDELKSALKYEIDQYIP-NSDEYIIDYKQIDNDEDSKKTKVMIVAAPKNMISEYVKLT 62 Query: 148 ERLRVHVSAITPDA 161 + L++ + I + Sbjct: 63 DMLKMRIEVIDVYS 76 >UniRef50_A9BA90 Tfp pilus assembly protein, ATPase PilM n=1 Tax=Prochlorococcus marinus str. MIT 9211 RepID=A9BA90_PROM4 Length = 623 Score = 53.5 bits (127), Expect = 8e-06, Method: Composition-based stats. Identities = 23/180 (12%), Positives = 54/180 (30%), Gaps = 14/180 (7%) Query: 10 LHLQQQEAV-AVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELPQ 68 + + E AVA ++ R+ + + + D +A+ L E Sbjct: 36 IDFRVDEINIAVASSGDKNNINFNKFVRIDIPPEALDKSIPTDTNLMAELLKDVLEENGV 95 Query: 69 -RHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD-----YS 122 + + T R PS ++ + ++ + FD + Sbjct: 96 LSLKCSIVLSSDTTYTRLIDIPSDLNDQQAYKYVSDPSSVLQIPIPLTKSDFDISSTSFH 155 Query: 123 EDSLS----PAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCL 178 +++ Y +++ K T+++ + V I L + +H L Sbjct: 156 PKNINGTTLKKYFLSSIPKKSSDTIISTLFSAGLDVCTID---FNFLCQLRLINNHISSL 212 >UniRef50_B3PKD3 Putative MSHA biogenesis protein MshI n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PKD3_CELJU Length = 341 Score = 53.1 bits (126), Expect = 9e-06, Method: Composition-based stats. Identities = 23/184 (12%), Positives = 48/184 (26%), Gaps = 26/184 (14%) Query: 8 IGLHLQQQEAVAVAI-VRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSREL 66 +G+ I ++ L +P+ A+ L +L Sbjct: 47 LGVEFTPDGVALAHIHRPATQQPHLVHCEFIPVNAG----------DNPAEQLRQRIAKL 96 Query: 67 PQRHHIMLAFPASRTLQ----RSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYS 122 + P + + + + + E L + + D Sbjct: 97 GLQT-----VPCNLVMSVGSYQMLLGEAPKVPREELAEALRYRVKDLVHFPITEAVVDGI 151 Query: 123 EDSLSPA------YNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQ 176 A Q K + TL+ A+ + + AI AL+ + Q+ Sbjct: 152 LLPEDSARGTSRMAYAVVTQKKHIETLVDYAKTAGLELKAIDIPEMALRNLVETCCDTQR 211 Query: 177 CLAW 180 +A Sbjct: 212 GVAL 215 >UniRef50_B2GB80 Cell division protein FtsA n=20 Tax=Lactobacillus RepID=B2GB80_LACF3 Length = 460 Score = 52.7 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 18/195 (9%), Positives = 47/195 (24%), Gaps = 36/195 (18%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 M +GL + A+ E + + G IVD ++ A + Sbjct: 1 MNDSHIYVGLDIGTTSIKALVCEDVKGELRVVGVGTQ--PAGGLSRGVIVDIEKTAHAIQ 58 Query: 61 PW-----SRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSG--------TMA 107 + + +++ PA+ + + ++ M Sbjct: 59 AAVRQATEKSGIKIDKVIVGLPANYLQMTEVHGMITVANQGQPREIINQDVIDVASAAMT 118 Query: 108 RELDMDPD--SLRF------DYSEDSLSPAYNVTAAQ-----------SKELATLLTLAE 148 + L + + L D+++ A + + Sbjct: 119 QNLPPEREVIDLVLRDFAVDDFNKIEDPRGM--VAVRLELRATMYSGPKTIVHNTKKAVA 176 Query: 149 RLRVHVSAITPDASA 163 + + + A Sbjct: 177 LAGLQIQDLVVAPIA 191 >UniRef50_UPI00016C4016 hypothetical protein GobsU_21055 n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4016 Length = 527 Score = 52.7 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 23/187 (12%), Positives = 50/187 (26%), Gaps = 27/187 (14%) Query: 8 IGLHLQQQEAVAVAIVRGAKECFLQRWW-----RLPLENDIIKDGRIVDAQQLAKTLLPW 62 I + L+ AV+ L P + + + L L Sbjct: 5 IAIDLEAGGVYAVSGGTRGGAKVLHALAWTNTDEEP-PPPLSAETAKSFGEALRAKLKD- 62 Query: 63 SRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYS 122 ++++ R + + P + + A + +E+ PD + DY Sbjct: 63 --AGIAPAPVLVSVGRDRVILKELRHPPVPPADEP--AVIRFQAVKEMSESPDDVVLDYV 118 Query: 123 EDSLS---------PAYNVTAAQSKELATLLTLAERLRVHVSAITPDASA----LQRFLP 169 + A + + L + + + ++ TP A L R Sbjct: 119 PIGDTSAGAGERRAMAVML---RKDVLNAITAMTTAAGLKLAGATPRPYAVAAGLGRAFA 175 Query: 170 FLPSHQQ 176 + Sbjct: 176 LGAAPAP 182 >UniRef50_C8NFI0 Cell division protein FtsA n=7 Tax=Firmicutes RepID=C8NFI0_9LACT Length = 442 Score = 52.7 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 17/195 (8%), Positives = 52/195 (26%), Gaps = 28/195 (14%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWW---RLPLENDIIKDGRIVDAQQLAK 57 M + + L + V + + L +I D + + K Sbjct: 1 MKNQGIYVSLDIGTTSIKVVVAEYVRGQLNIIGVGNEKSEGLSRGVIVD-IDETVESIRK 59 Query: 58 TLLPWS-RELPQRHHIMLAFPASRTLQRSFP-RPSMSLGEREQ----------TAWLSGT 105 + + Q +++ P+++ ++S RE A + Sbjct: 60 AVRQAEQKSNIQIKDVIVGIPSNQISIEPCHGMIAVSSENREITDVDVYNVISAAKVRSV 119 Query: 106 M--ARELDMDPDSLRFD-YSEDSLSPAYN-----VTAA----QSKELATLLTLAERLRVH 153 + + P+ D + + A+ + + ++ ++ Sbjct: 120 APEREIISVIPEEFIVDGFDGIKDPRGMIGVRLELFASMITGPKTIVHNIKRCIDKAGLN 179 Query: 154 VSAITPDASALQRFL 168 + + A+ + Sbjct: 180 IEEMVIQPLAISQVA 194 >UniRef50_A8VWS1 Cell division protein FtsA n=3 Tax=Bacillus RepID=A8VWS1_9BACI Length = 721 Score = 51.9 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 27/202 (13%), Positives = 55/202 (27%), Gaps = 46/202 (22%) Query: 9 GLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSREL-- 66 GL + + V + I + + + DG+I + ++A+T+ + L Sbjct: 12 GLDIGTRSIVGLIIQSTETGYHVLDVHSIEHTERSMLDGQIHNVIEVARTITLVKQHLEE 71 Query: 67 --PQRHHIMLAFPASRT----------LQRSFPRPSMSLGEREQTAWLSGTMARELDMDP 114 + +A + +L E +A + Sbjct: 72 RYGPLKKVCVAAAGRSLKTVKAVEELNITGKPIFDRTALLALELSAVQKAQ----FKLAS 127 Query: 115 DS---------------LRFDYSEDSL-----------SPAYNVTAA--QSKELATLLTL 146 D DY D + A V A + +L+ Sbjct: 128 DESGQTNGAVNEYCVGYSVLDYHLDGEKIGSLVDQKGRNAAVEVIATFLPKVVVESLIAA 187 Query: 147 AERLRVHVSAITPDASALQRFL 168 +R + + A+T + A L Sbjct: 188 LQRSDLELEALTLEPIAAINVL 209 >UniRef50_O07672 Cell division protein ftsA n=87 Tax=Lactobacillales RepID=FTSA_ENTHR Length = 442 Score = 51.9 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 23/192 (11%), Positives = 53/192 (27%), Gaps = 30/192 (15%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 MA +GL + V + + +++ I G IVD + + + Sbjct: 1 MAKTGMYVGLDIGTTSVKVVVAEYIDSQMNIIGVGNA--KSEGINRGIIVDIDKTVQAIQ 58 Query: 61 PWSRE-----LPQRHHIMLAFPASRTLQRSFP------RPSMSLGEREQTAWLSGTMARE 109 R+ Q + + PA+ + S + + + S + R Sbjct: 59 RAVRQAEEKAGIQIKGVSVGLPANLLEVENCQGMIAVNGDSKEITDEDVRNVASAALVRS 118 Query: 110 LDMDPDSLRF---DYSEDS-----LSPAY---------NVTAAQSKELATLLTLAERLRV 152 + + + D++ D + + + E + Sbjct: 119 IPPERQIVSILPQDFTVDGFEGIKDPRGMIGVRLEMYGLLFTGPKTIVHNIRKCVENAGL 178 Query: 153 HVSAITPDASAL 164 V+ + AL Sbjct: 179 VVNELVITPLAL 190 >UniRef50_B8FE40 Fimbrial assembly family protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FE40_DESAA Length = 485 Score = 51.5 bits (122), Expect = 2e-05, Method: Composition-based stats. Identities = 21/164 (12%), Positives = 47/164 (28%), Gaps = 20/164 (12%) Query: 4 KIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWS 63 ++GL +Q AV I G + + ++ + LA L Sbjct: 2 PENRLGLDIQSDSVRAVVI-GGGLKPRVAAHAQV----------EVNGQGGLALALNKAL 50 Query: 64 RELPQRHHI-----MLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLR 118 +L + + ++F + T ++ P + Q L + + + Sbjct: 51 EDLGGQTDVDRIPCSVSFGDANTSFKNVVIPFSEAKKIRQ--VLPFELESLIPYKVEEAV 108 Query: 119 FDYSEDSLSP--AYNVTAAQSKELATLLTLAERLRVHVSAITPD 160 DY + E+ L + ++ + P Sbjct: 109 PDYHVIRKGDHTECLAAVTTAFEVGGALEIMANAGLNADILAPS 152 >UniRef50_O07111 Cell division protein ftsA n=22 Tax=Enterococcus faecalis RepID=FTSA_ENTFA Length = 440 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 24/192 (12%), Positives = 51/192 (26%), Gaps = 30/192 (15%) Query: 1 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL 60 MA +GL + V + + ++D + G +VD Q + + Sbjct: 1 MAKTGMYVGLDIGTTSVKVVVAEYIEGQMNIIGVGNA--KSDGLNRGIVVDIDQTVQAIQ 58 Query: 61 PWSRE-----LPQRHHIMLAFPASRTLQRSFPRPSMSLGE-----REQTAWLSGTM-ARE 109 R+ Q + + PA+ S E E ++ R Sbjct: 59 RAVRQAEEKAGIQIKSVNVGLPANLLEVESCQGMIAVSSESKEITDEDVRNVASAALVRS 118 Query: 110 LDMDPDSLRF---DYSEDS-----LSPAYN---------VTAAQSKELATLLTLAERLRV 152 + + D++ D V + + E+ + Sbjct: 119 TPPERQIVAILPQDFTVDGFEGIKDPRGMLGVRMEMFGVVYTGPKTIIHNIRKCVEKAGL 178 Query: 153 HVSAITPDASAL 164 ++ + AL Sbjct: 179 GINELVITPLAL 190 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.310 0.141 0.367 Lambda K H 0.267 0.0437 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,426,334,754 Number of Sequences: 3077464 Number of extensions: 51056895 Number of successful extensions: 189092 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 164 Number of HSP's successfully gapped in prelim test: 295 Number of HSP's that attempted gapping in prelim test: 188280 Number of HSP's gapped (non-prelim): 498 length of query: 259 length of database: 1,040,396,356 effective HSP length: 126 effective length of query: 133 effective length of database: 652,635,892 effective search space: 86800573636 effective search space used: 86800573636 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 92 (40.0 bits)