BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (216 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P0AEW2 Hydrogenase-4 component E n=70 Tax=Bacteria RepI... 429 e-119 UniRef50_Q20XP2 NADH-ubiquinone oxidoreductase, chain 4L n=4 Tax... 220 3e-56 UniRef50_B7R8R0 NADH-ubiquinone/plastoquinone oxidoreductase cha... 193 4e-48 UniRef50_A7GWM9 Hydrogenase-4 component E n=8 Tax=Epsilonproteob... 134 2e-30 UniRef50_A1RWL6 NADH-ubiquinone oxidoreductase, chain 4L n=1 Tax... 100 5e-20 UniRef50_Q2RXM1 NADH-ubiquinone oxidoreductase, chain 4L n=1 Tax... 74 3e-12 UniRef50_Q0W2B7 Hydrogenase, membrane subunit 2-like protein n=1... 72 1e-11 UniRef50_B8I2P7 Hydrogenase, membrane subunit 2-like protein n=2... 68 2e-10 UniRef50_B1ZSF0 Hydrogenase 4 membrane component (E) n=1 Tax=Opi... 62 1e-08 UniRef50_Q609T7 Hydrogenase subunit n=1 Tax=Methylococcus capsul... 61 3e-08 UniRef50_C1XWY5 Hydrogenase 4 membrane component (E) n=1 Tax=Mei... 59 1e-07 UniRef50_Q1PZL6 Similar to membrane-bound [NiFe]-hydrogenase-4, ... 58 2e-07 UniRef50_Q24ST6 Hydrogenase-4 component E n=2 Tax=Desulfitobacte... 54 4e-06 UniRef50_C8W238 Hydrogenase 4, membrane component n=1 Tax=Desulf... 53 9e-06 UniRef50_Q12F18 Hydrogenase 4 membrane component n=30 Tax=Bacter... 52 1e-05 UniRef50_Q5P2G8 Hydrogenase 4 membrane component n=2 Tax=Betapro... 52 2e-05 UniRef50_A7HGW6 NAD-dependent dehydrogenase subunit n=5 Tax=Bact... 52 2e-05 UniRef50_B4UA29 Hydrogenase 4 membrane component (E) n=2 Tax=Aqu... 51 3e-05 UniRef50_A5GBF7 Hydrogenase 4 membrane component (E)-like protei... 51 3e-05 UniRef50_C7LSU7 NAD-dependent dehydrogenase subunit n=2 Tax=Bact... 51 4e-05 UniRef50_A5FYC6 Hydrogenase 4 membrane component (E)-like protei... 49 2e-04 UniRef50_A0LSU3 Hydrogenase subunit n=1 Tax=Acidothermus cellulo... 47 4e-04 UniRef50_C0QBF5 HyfE n=1 Tax=Desulfobacterium autotrophicum HRM2... 46 0.001 UniRef50_C7HZ66 Hydrogenase 4 membrane component (E)-like protei... 46 0.001 UniRef50_P64681 Uncharacterized protein Rv0085/MT0092 n=17 Tax=A... 45 0.002 UniRef50_B0SCU9 Formate hydrogenase, subunit E n=2 Tax=Leptospir... 44 0.006 UniRef50_C8XAS1 Putative uncharacterized protein n=2 Tax=Actinom... 42 0.011 UniRef50_D0L1P2 Hydrogenase 4 membrane component (E) n=3 Tax=Pro... 41 0.024 UniRef50_C4XJS8 Putative hydrogenase-4 component E n=1 Tax=Desul... 41 0.025 UniRef50_B5YKQ7 Putative uncharacterized protein n=1 Tax=Thermod... 40 0.066 UniRef50_Q6APF0 Hypothetical membrane protein n=1 Tax=Desulfotal... 40 0.078 >UniRef50_P0AEW2 Hydrogenase-4 component E n=70 Tax=Bacteria RepID=HYFE_ECO57 Length = 216 Score = 429 bits (1103), Expect = e-119, Method: Compositional matrix adjust. Identities = 216/216 (100%), Positives = 216/216 (100%) Query: 1 MTGSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIW 60 MTGSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIW Sbjct: 1 MTGSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIW 60 Query: 61 SASAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPM 120 SASAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPM Sbjct: 61 SASAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPM 120 Query: 121 ATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIG 180 ATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIG Sbjct: 121 ATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIG 180 Query: 181 IATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 IATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG Sbjct: 181 IATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 >UniRef50_Q20XP2 NADH-ubiquinone oxidoreductase, chain 4L n=4 Tax=Bacteria RepID=Q20XP2_RHOPB Length = 217 Score = 220 bits (560), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 122/217 (56%), Positives = 154/217 (70%), Gaps = 1/217 (0%) Query: 1 MTGSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIW 60 M+G IVN LAGL+++TSL V+ + S FYA QSLVLV++F L A QL IW Sbjct: 1 MSGLQIVNGLAGLLIVTSLLVVVARKPSQSAKFYALQSLVLVAVFVALGSATNAPQLYIW 60 Query: 61 SASAFITKVLLVPLIMTYA-ARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLP 119 +A AF+TKV+LVP+IM + R + + PA+ LLAA++VLLC ++ V LP Sbjct: 61 AAVAFVTKVVLVPVIMARSFGRLSDERLGTGERISPAVTVLLAAVVVLLCTLIISGVTLP 120 Query: 120 MATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEI 179 A G+KPALA++L HF GL CIV+QRNIL+Q+FGYCLMENGSHL LALLA APELVEI Sbjct: 121 AAAGIKPALAISLAHFFFGLACIVTQRNILKQVFGYCLMENGSHLTLALLAGSAPELVEI 180 Query: 180 GIATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 GI TDA+FAV++MV+LA +I R TLD + LT LKG Sbjct: 181 GITTDAVFAVVIMVILATQINRKLATLDADQLTTLKG 217 >UniRef50_B7R8R0 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L family protein n=4 Tax=Firmicutes RepID=B7R8R0_9THEO Length = 238 Score = 193 bits (490), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 98/216 (45%), Positives = 145/216 (67%), Gaps = 1/216 (0%) Query: 1 MTGSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIW 60 M+G+ IVN L+ L++LTS+ V+ + R++ Y QSLVLV+IF +++ A+ L IW Sbjct: 24 MSGTNIVNVLSVLLILTSMLVVETRKLRMAAYMYRFQSLVLVTIFLSIAVFMEAKPLYIW 83 Query: 61 SASAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPM 120 S +A ITK LVP ++ + + E + +LA I+ L VV+P + Sbjct: 84 SITALITKTFLVPYLILKVIERVKEQ-EEGVAIDRKLTIILAVGILALSFAVVEPFHMQA 142 Query: 121 ATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIG 180 L+ ALAV++ HF+LGLLCI++++N L+QI GYCLMENGSHL LA++A+ APE VEIG Sbjct: 143 VLKLRVALAVSIAHFMLGLLCILARKNALKQILGYCLMENGSHLTLAIMAYNAPETVEIG 202 Query: 181 IATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 I TDA+FAV++M ++AR++++ GTLD + LT LKG Sbjct: 203 ILTDAVFAVLIMTIIARRLFKDFGTLDTDKLTLLKG 238 >UniRef50_A7GWM9 Hydrogenase-4 component E n=8 Tax=Epsilonproteobacteria RepID=A7GWM9_CAMC5 Length = 220 Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 80/212 (37%), Positives = 132/212 (62%), Gaps = 1/212 (0%) Query: 6 IVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASAF 65 I++ LA M++TSL V +++ +LS YA Q+L+LVSIF LS F AEQL +W+ AF Sbjct: 9 ILDTLAICMIVTSLAVFGLRNLKLSVIVYAIQTLLLVSIFFLLSKKFDAEQLSMWAIVAF 68 Query: 66 ITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGLK 125 TKV+LVP I+ + + + ++ + G + ++A L + + P+ L + + Sbjct: 69 FTKVILVPGILLWLIKKLNVVSEDEPVGGFFVSPIIAMGFSLALSMSIHPIFLKFSLIKE 128 Query: 126 PALAVALGH-FLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATD 184 + +A G F++G+ + + + ++QI YCL ENG HL LAL+A+ + ELVE+GI TD Sbjct: 129 EIMLIAAGTIFMMGIFGFMLRNSFIKQILAYCLFENGIHLSLALMAYNSHELVELGILTD 188 Query: 185 AIFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 AIFAVI+M +LA + ++ + +LD + + L+G Sbjct: 189 AIFAVIIMSVLAIRFYKAYDSLDTSKASNLRG 220 >UniRef50_A1RWL6 NADH-ubiquinone oxidoreductase, chain 4L n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWL6_THEPD Length = 212 Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 75/210 (35%), Positives = 119/210 (56%), Gaps = 15/210 (7%) Query: 11 AGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIF---ATLSCLFAAEQLLIWSASAFIT 67 A LM+LT+ ++ ++ R + Y Q+L+L SIF +T+ FA +W +A +T Sbjct: 12 AALMVLTASYINEERNLRRATYAYCVQTLLLASIFFMLSTVEWYFA-----LWGLTAILT 66 Query: 68 KVLLVPLIMTYAARNIPQNIPEKALFGP-AMMALLAALIVLLCAFVVQPVKLPMATGLKP 126 K +LVP + + + + E+ G A LL ALI + A + V +G + Sbjct: 67 KAVLVPYFILRTTKRVDAVVEEEPYLGGWASHILLGALIAIGFAIGTRIV-----SGWES 121 Query: 127 A-LAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATDA 185 L+V++ FL+GL +V++R+ L+QI G C ENGSHL LA++A PE VE+G+ TDA Sbjct: 122 VPLSVSVALFLIGLHLMVTRRDALKQILGICHFENGSHLTLAVMAPGLPETVEVGVLTDA 181 Query: 186 IFAVIVMVLLARKIWRTHGTLDVNNLTALK 215 + V+V LLA ++ + GTLD L+ L+ Sbjct: 182 VLLVLVCCLLAEEMKKVVGTLDTGRLSLLR 211 >UniRef50_Q2RXM1 NADH-ubiquinone oxidoreductase, chain 4L n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RXM1_RHORT Length = 221 Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 52/219 (23%), Positives = 103/219 (47%), Gaps = 24/219 (10%) Query: 13 LMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASAFITKVLLV 72 L+++TS V+ + + + Y CQS+++ +F L W+ +A ++K +++ Sbjct: 12 LLIVTSFVVVEWRYLKGAIFTYQCQSVLMALMFVLYGTALDNHALYYWAGTALVSKGVII 71 Query: 73 PLIMTYAARNIPQNIPEKALFGPAMMALLAALI---------------VLLCAFVVQPVK 117 P ++ + + + G A+ +LA ++ V+ + +P + Sbjct: 72 PWLLRQYVNKVGAE-ETRPMMGAALSFILAVVVAALAFWWTFNHHDDLVITAELIGEPYR 130 Query: 118 LPMATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELV 177 L LAVA ++G ++++R+ + + G CL+EN HL LA LA E Sbjct: 131 LN--------LAVAAVVLVIGFYALLTRRDAFKIVIGLCLLENAVHLSLASLAPTIAETA 182 Query: 178 EIGIATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 IG+ TD + +V +M+ + R I+ G+ D N++ L G Sbjct: 183 MIGVVTDVVISVWMMLYVVRSIYGAVGSTDTTNISQLNG 221 >UniRef50_Q0W2B7 Hydrogenase, membrane subunit 2-like protein n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W2B7_UNCMA Length = 220 Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 54/213 (25%), Positives = 103/213 (48%) Query: 3 GSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSA 62 G+ I+N LA ++ LT+ +++ A QSL L + A ++ + + + +A Sbjct: 7 GNNIINGLAVVIFLTTFLIVAHTRLYPWVRTLAIQSLALGLLGAAVAYFTGSPHIYLVAA 66 Query: 63 SAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMAT 122 I K ++P + Y I + + + L+A + +L F+ +P+ + Sbjct: 67 LTIIIKAFIIPRFIEYTMNRINVDREVEMMLNVPASLLVAGGLAILSYFITEPIIAQGSA 126 Query: 123 GLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIA 182 K LA+++ L+G ++S+R + QI G +MENG L ++ P +VEIG+ Sbjct: 127 ITKNCLAISIAVVLIGFFIMISRRKAITQIMGLMVMENGLFLAAISTSYGMPLIVEIGVF 186 Query: 183 TDAIFAVIVMVLLARKIWRTHGTLDVNNLTALK 215 D + V++M + A +I +T T+D L L+ Sbjct: 187 FDILVGVLIMGIFAFQINKTFDTIDTGILRRLR 219 >UniRef50_B8I2P7 Hydrogenase, membrane subunit 2-like protein n=2 Tax=Clostridium RepID=B8I2P7_CLOCE Length = 220 Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 41/149 (27%), Positives = 76/149 (51%) Query: 68 KVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGLKPA 127 KV L+P++M + + + + + L+ +V+LC +VV ++ + Sbjct: 72 KVFLIPMVMRRTSNRVEYKVEKDFFINIPISMLICCGLVVLCWYVVFNIEGITNPATENY 131 Query: 128 LAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATDAIF 187 L +L ++GL ++S++ L QI G+ ++ENG L L P +VE+G+ D + Sbjct: 132 LIYSLSVVMIGLFFMISRKKALGQIIGFLVIENGLFLSAMLTTGGMPMIVELGLFFDLLT 191 Query: 188 AVIVMVLLARKIWRTHGTLDVNNLTALKG 216 A ++M + KI T ++D+N L LKG Sbjct: 192 AFLIMGIFVFKINNTFNSIDINKLKQLKG 220 >UniRef50_B1ZSF0 Hydrogenase 4 membrane component (E) n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZSF0_OPITP Length = 222 Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 59/220 (26%), Positives = 103/220 (46%), Gaps = 12/220 (5%) Query: 2 TGSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWS 61 T S ++ A +M++ L ++ + + +A QSL+L +I A + + A + + + Sbjct: 8 TSSQLITLFASVMLVLQLLIVVQRMLITNIRLFAMQSLLLAAIAAVVGYTYGAWHVYVVA 67 Query: 62 ASAFITKVLLVPLIMTYAARNIPQNIPEKALFG-PAMMALLAALIVLLCAFVVQPV---- 116 + KVL +P + R + + PA M + AL VL C V +P Sbjct: 68 VLTLLGKVLFLPWWLHRLVRQMKVEQEVQPFVNMPASMLICGALTVLACV-VARPFTSLE 126 Query: 117 KLPMATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLV-LALLAWRAPE 175 +L T + G FL+ +++R + Q+ MENG L +AL + P Sbjct: 127 RLGSNTLAVALALLLTGFFLM-----INRRKAITQVLALLTMENGMMLAAIALTTYGMPF 181 Query: 176 LVEIGIATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALK 215 +VEIGI D + AV+V+ +L +I + ++DV+ L LK Sbjct: 182 VVEIGIFFDVVVAVMVLGILVFRIRESFASMDVSKLNKLK 221 >UniRef50_Q609T7 Hydrogenase subunit n=1 Tax=Methylococcus capsulatus RepID=Q609T7_METCA Length = 225 Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 42/150 (28%), Positives = 79/150 (52%), Gaps = 4/150 (2%) Query: 68 KVLLVPLIMTY--AARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGLK 125 KV+L+P ++ ++ ++ L+G MMA AA +V+ +VV+P++ + Sbjct: 74 KVILIPAMLHRLIVRLDMHRDAEPLYLYGYVMMA--AAALVMFSYYVVEPIEHLSTLATR 131 Query: 126 PALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATDA 185 A+AV+L LLG+L ++++R ++ + G+ +ENG P +VE+GIA D Sbjct: 132 NAMAVSLAVVLLGMLLMITRRQVVTHVIGFMAIENGLFFAAVASTQGMPMVVELGIAFDV 191 Query: 186 IFAVIVMVLLARKIWRTHGTLDVNNLTALK 215 + A ++ + I + +LDV+ L L Sbjct: 192 LVAAVIFGVFFFHIRSSIDSLDVDRLNRLS 221 >UniRef50_C1XWY5 Hydrogenase 4 membrane component (E) n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XWY5_9DEIN Length = 193 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 59/108 (54%), Gaps = 6/108 (5%) Query: 109 CAFVVQPVKLPMATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLAL 168 +FV++ +LP A+ VALG LLG+L + S++ + Q+ G+ +ENG L+ Sbjct: 92 SSFVLEGARLP------EAVPVALGLILLGMLSMASRKKAVTQVLGFLALENGVFLLALA 145 Query: 169 LAWRAPELVEIGIATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 P +E+G+A DA AV++ +L +I T G +D + LKG Sbjct: 146 ETHGLPLFIELGVALDAFAAVVLAGVLISRIQSTFGHIDTARMRDLKG 193 >UniRef50_Q1PZL6 Similar to membrane-bound [NiFe]-hydrogenase-4, subunit E n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZL6_9BACT Length = 221 Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 45/215 (20%), Positives = 99/215 (46%) Query: 1 MTGSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIW 60 + S I++ LA LM++T++ +I + A +S +L ++ L + I Sbjct: 6 IVNSQIIDVLAVLMLMTTIILIGTSRLKTCIWASAIRSFLLTLTSGLIAYLSGIHHIYIT 65 Query: 61 SASAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPM 120 + + + KV ++P + Y + ++ + L++ I+L+ + P+ Sbjct: 66 TGISLVLKVFVIPGFLFYIVDKVRIKKEVESYISYTLSLLISCGIILIAYYATLPIIQFE 125 Query: 121 ATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIG 180 ++ L V+L LLG +++++ + QI G ME+G ++ P +VE+G Sbjct: 126 NVFMRHCLPVSLAITLLGFFAMITRKKAITQILGLITMEDGLFFAALSTSYGMPLIVELG 185 Query: 181 IATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALK 215 + D + +VI+M + +I + ++DV L+ Sbjct: 186 VFFDILVSVIIMGVYVYRIKESFDSIDVGFFRELR 220 >UniRef50_Q24ST6 Hydrogenase-4 component E n=2 Tax=Desulfitobacterium hafniense RepID=Q24ST6_DESHY Length = 218 Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 37/115 (32%), Positives = 63/115 (54%) Query: 102 AALIVLLCAFVVQPVKLPMATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENG 161 AA + +L + QP+ + L+ LA+A GLL +V ++ L Q+ G L++NG Sbjct: 104 AAALTILAYAITQPLLSLVEPALRNGLAIAFALLFYGLLLMVIRKVALVQVVGILLIDNG 163 Query: 162 SHLVLALLAWRAPELVEIGIATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 L LL P LVE+G+ D + V+++ +LA+++ +L+V L +LKG Sbjct: 164 IFLAGFLLTSGMPLLVEVGVIFDVLIGVLILGVLAQRMILKFDSLNVERLNSLKG 218 >UniRef50_C8W238 Hydrogenase 4, membrane component n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W238_DESAS Length = 214 Score = 52.8 bits (125), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 47/89 (52%) Query: 128 LAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATDAIF 187 L+ AL LLG ++S+R + Q+ G +MENG L + P ++E+GI D + Sbjct: 126 LSAALSTVLLGCFFMISRRTAISQLIGIVVMENGLFLCAVAVTGGMPLIIELGIFFDVLV 185 Query: 188 AVIVMVLLARKIWRTHGTLDVNNLTALKG 216 +VM ++ +I T TLD L LKG Sbjct: 186 GALVMGIMTYQIRGTFDTLDTKYLNKLKG 214 >UniRef50_Q12F18 Hydrogenase 4 membrane component n=30 Tax=Bacteria RepID=Q12F18_POLSJ Length = 219 Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 48/167 (28%), Positives = 84/167 (50%), Gaps = 14/167 (8%) Query: 56 QLLIWSASAFITKVLLVPLIMTYAAR--NIPQNIPEKALFGPAMMALLAALIVLLCAFVV 113 L I + F+ KVLL+P ++ NI ++ E + P M L ++V++ AF Sbjct: 58 HLYISAGVTFVLKVLLIPYLLHRVIDRLNIRWDV-ETLINIPTTM--LIGIVVVIFAF-- 112 Query: 114 QPVKLPMATGLKPALA-----VALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLAL 168 + +P+A L ALA +AL LL L ++++ + Q+ G+ MENG Sbjct: 113 -DLAMPIAR-LSSALASGTLGIALACVLLSFLMMITRAKAVPQVIGFLAMENGLFFAATS 170 Query: 169 LAWRAPELVEIGIATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALK 215 + P +VE+GIA D + V+++ + +I +LD+++L LK Sbjct: 171 ATYGMPMVVELGIALDVLIGVLILGVFMFQIREQFDSLDISHLEKLK 217 >UniRef50_Q5P2G8 Hydrogenase 4 membrane component n=2 Tax=Betaproteobacteria RepID=Q5P2G8_AZOSE Length = 219 Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 77/163 (47%), Gaps = 1/163 (0%) Query: 54 AEQLLIWSAS-AFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFV 112 + L +SA+ F+ KV+L+P+++ + + LF L+ ++V+ + Sbjct: 55 GQHHLYYSAAMTFVLKVILIPILLHRVIERLNVRWDVETLFNIPTTMLIGIVLVIFAFNL 114 Query: 113 VQPVKLPMATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWR 172 P+ A+ + L +AL LL L ++ + + Q+ G+ MENG Sbjct: 115 AAPIAGLSASIARGTLGIALACVLLSFLMMIVRAKAVPQVIGFLSMENGLFFAATAATSG 174 Query: 173 APELVEIGIATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALK 215 P +VE+GIA D + ++++ + +I +LD+ +L LK Sbjct: 175 MPMIVELGIAFDVLVGILILGVFMFQIREQFDSLDIRHLEKLK 217 >UniRef50_A7HGW6 NAD-dependent dehydrogenase subunit n=5 Tax=Bacteria RepID=A7HGW6_ANADF Length = 215 Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 46/78 (58%) Query: 138 GLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATDAIFAVIVMVLLAR 197 GLL +V+++ + Q+ G+ ++ENG ++ LL+ P +VE G+ D AV VM ++ Sbjct: 137 GLLLVVTRKKAVSQVLGFLVLENGVYVFGLLLSDVMPVMVEAGVLLDLFAAVFVMGIVMF 196 Query: 198 KIWRTHGTLDVNNLTALK 215 I R +LD L+ALK Sbjct: 197 HINREFSSLDTEKLSALK 214 >UniRef50_B4UA29 Hydrogenase 4 membrane component (E) n=2 Tax=Aquificales RepID=B4UA29_HYDS0 Length = 222 Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 16/209 (7%) Query: 18 SLF--VISVKSYRLSCGF--YACQSLVLVSIFATLSCLFAAEQLLIWSAS-AFITKVLLV 72 SLF ++ S+RL Y QS+ L SI LS + + LI SA + K +L+ Sbjct: 18 SLFFAILQTASHRLDFAIKTYTAQSIAL-SITMFLSVFYYFDYELILSAVLTLLIKGILI 76 Query: 73 PLIMTYAARNIPQNIPEKALFGPAM---MALLAALIVLLCAFVVQPVKLPMATG---LKP 126 P +M + I I E P + ++L + +++ +F + +T ++ Sbjct: 77 PFVM----KKITDKIVEDENVKPFINFTYSVLICIFIVIFSFYITSNTFYHSTDNGTMQK 132 Query: 127 ALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATDAI 186 LA+ L +G+ +++++ L QI G+ +ENG L P +VEIG+ D Sbjct: 133 VLAIGLSIIFVGIFLMLARKKALIQIIGFLTLENGIILGATSTVKGLPLIVEIGVFFDVF 192 Query: 187 FAVIVMVLLARKIWRTHGTLDVNNLTALK 215 I+ +L I T ++D + L+ LK Sbjct: 193 VGAIMAGILIFHIKDTLESIDTSKLSDLK 221 >UniRef50_A5GBF7 Hydrogenase 4 membrane component (E)-like protein n=10 Tax=Desulfuromonadales RepID=A5GBF7_GEOUR Length = 214 Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 2/101 (1%) Query: 117 KLPMATGLKPALAV--ALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAP 174 KLP+A + L V ++ + G L + ++R + Q+ GY ++ENG + LL P Sbjct: 113 KLPLAQEHQGLLFVPASIATIITGFLTLTTRRKAISQVIGYLILENGIFIFGLLLTSAMP 172 Query: 175 ELVEIGIATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALK 215 +VE G D + + VM ++ I T+D + LTALK Sbjct: 173 VMVEAGALLDLLVGIFVMGIVINHISNEFSTIDTSRLTALK 213 >UniRef50_C7LSU7 NAD-dependent dehydrogenase subunit n=2 Tax=Bacteria RepID=C7LSU7_DESBD Length = 214 Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 4/150 (2%) Query: 68 KVLLVPLIMTYAAR--NIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGLK 125 K +L+P ++ A R NI + + + P+++ A I + P+ A L Sbjct: 66 KGVLIPFMLIRAMRAANIARELEPYIGYIPSLLLGAAGTIAAVALTRYLPLLPEHAGNLH 125 Query: 126 PALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATDA 185 A+AL L G + ++ + + Q+ GY ++ENG +L LL P LVE GI D Sbjct: 126 VPGAMAL--ILTGFILLIGRTKAISQVCGYLILENGIYLAGLLLIRSTPILVEFGILLDV 183 Query: 186 IFAVIVMVLLARKIWRTHGTLDVNNLTALK 215 + V+ ++ +I R +LD LTAL Sbjct: 184 TVGIFVIGIIVDRIQRAFDSLDTRKLTALH 213 >UniRef50_A5FYC6 Hydrogenase 4 membrane component (E)-like protein n=18 Tax=Bacteria RepID=A5FYC6_ACICJ Length = 229 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 3/93 (3%) Query: 125 KPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRA-PELVEIGIAT 183 + LA+AL L+G+L +V++RN + QI G+ ++ENG L+LA + P +VEI +A Sbjct: 136 REDLALALSVILIGMLMMVTRRNAVSQIAGFMMLENG--LILAAAGAQGMPLVVEISVAF 193 Query: 184 DAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 + A IV+ + +I T+D L A +G Sbjct: 194 SILIAFIVIGVFLFRIRERFDTVDSAALDAFRG 226 >UniRef50_A0LSU3 Hydrogenase subunit n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LSU3_ACIC1 Length = 224 Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 70/151 (46%) Query: 66 ITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGLK 125 + KVL VP ++ R+ +I + G A L A L F + + A + Sbjct: 74 VLKVLAVPAVLRRMLRDTGTDIAGSGVLGVATRTLCALLATAFGFFATAGLPIRAAVLPR 133 Query: 126 PALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATDA 185 AL++A+ L+ + ++ +R+++ Q G+ MEN L ++A P L+E+ + D Sbjct: 134 TALSLAVAAVLVAFILMIFRRDVVSQAVGFFSMENAVSLASLVIAATMPFLLEVVLLFDL 193 Query: 186 IFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 + AV+V L R +L L+ L+G Sbjct: 194 LVAVVVFSALIRIHHNRRQSLSTRKLSGLRG 224 >UniRef50_C0QBF5 HyfE n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QBF5_DESAH Length = 215 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/89 (28%), Positives = 46/89 (51%) Query: 128 LAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATDAIF 187 L V+L GL ++++ + Q+ GY +MENG + +A + P +VE+ + D Sbjct: 126 LPVSLFTMFSGLFMTIARKKAITQVLGYMVMENGIYTFGMAMAIQEPFIVELSVLLDVFV 185 Query: 188 AVIVMVLLARKIWRTHGTLDVNNLTALKG 216 AV++M + I R +D + L+ L+ Sbjct: 186 AVLIMGVAIFHISREFDHMDTDRLSVLRD 214 >UniRef50_C7HZ66 Hydrogenase 4 membrane component (E)-like protein n=1 Tax=Thiomonas intermedia K12 RepID=C7HZ66_THIIN Length = 273 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 42/182 (23%), Positives = 84/182 (46%) Query: 34 YACQSLVLVSIFATLSCLFAAEQLLIWSASAFITKVLLVPLIMTYAARNIPQNIPEKALF 93 +A Q +LV+ ++ +L +A + KV+++PL++ R + + L Sbjct: 90 FAAQGALLVASTVVVAYSTGDAELYQSAALTLLLKVIVLPLVLHKLIRRLHAEWDTETLV 149 Query: 94 GPAMMALLAALIVLLCAFVVQPVKLPMATGLKPALAVALGHFLLGLLCIVSQRNILRQIF 153 + L+ ++V+ + QP+ ++ L +AL LL L ++ +R + Q+ Sbjct: 150 NIPTLQLIGIVLVIFSFVLAQPISRFAGEAMRGTLGIALALVLLAFLMMIVRRKAVAQVV 209 Query: 154 GYCLMENGSHLVLALLAWRAPELVEIGIATDAIFAVIVMVLLARKIWRTHGTLDVNNLTA 213 G+ MENG P +VE+GI D + V ++ + +I +LD+ N+ + Sbjct: 210 GFLAMENGLLFAATSATQGMPMVVELGIGLDVLVGVFILGIFFFQIREQFDSLDLQNMES 269 Query: 214 LK 215 LK Sbjct: 270 LK 271 >UniRef50_P64681 Uncharacterized protein Rv0085/MT0092 n=17 Tax=Actinomycetales RepID=Y085_MYCTU Length = 220 Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust. Identities = 33/114 (28%), Positives = 58/114 (50%), Gaps = 11/114 (9%) Query: 108 LCAF-VVQPVKLPMATGLKPALAV-----ALGHFLLGLLCIVSQRNILRQIFGYCLMENG 161 L AF + QPV L+P + + A L+ L + ++ + + Q G+ +++NG Sbjct: 111 LTAFAITQPV-----VNLEPGVTINAVPAAFAVVLIALFVMTTRLHAVSQAAGFLMLDNG 165 Query: 162 SHLVLALLAWRAPELVEIGIATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALK 215 LL P +VE+G + D +FAVIV+ +L ++ R G D++ L L+ Sbjct: 166 IAATAFLLTAGVPLIVELGASLDVLFAVIVIGVLTGRLRRIFGDADLDKLRELR 219 >UniRef50_B0SCU9 Formate hydrogenase, subunit E n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SCU9_LEPBA Length = 203 Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 54/123 (43%) Query: 68 KVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGLKPA 127 K LL P I+ + A N FG L L ++L + + V L K Sbjct: 63 KALLTPWILNWTANKSKMNESTTPRFGYLATLLFMVLGLVLAVKITEGVSLLSIPVHKIG 122 Query: 128 LAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATDAIF 187 L + +G+LC V +RN L I G+C+ ENG ++ +L P +E G DAI Sbjct: 123 LIYVILLVYVGILCFVVRRNWLALIAGFCVFENGIFVLTMVLDKGLPFGLEFGSFLDAIL 182 Query: 188 AVI 190 ++ Sbjct: 183 VIV 185 >UniRef50_C8XAS1 Putative uncharacterized protein n=2 Tax=Actinomycetales RepID=C8XAS1_NAKMY Length = 220 Score = 42.4 bits (98), Expect = 0.011, Method: Compositional matrix adjust. Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 8/120 (6%) Query: 100 LLAALIVLLCAFVVQPV----KLPMATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGY 155 L+AA + +L V QP+ P + ALAVAL +G +V++R L Q+ G+ Sbjct: 104 LVAAALTMLAYAVAQPLVALDPSPATHAIPAALAVAL----IGFFVLVTRRLALSQLVGF 159 Query: 156 CLMENGSHLVLALLAWRAPELVEIGIATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALK 215 L++NG V L +VE+GI+ D + V+V+ +L +I + G D++ L L Sbjct: 160 LLLDNGITAVGVLTTAELGLVVELGISLDVLLVVLVLQVLKTRIRQAFGRTDIDELRELH 219 >UniRef50_D0L1P2 Hydrogenase 4 membrane component (E) n=3 Tax=Proteobacteria RepID=D0L1P2_HALNC Length = 226 Score = 41.2 bits (95), Expect = 0.024, Method: Compositional matrix adjust. Identities = 46/186 (24%), Positives = 84/186 (45%), Gaps = 3/186 (1%) Query: 34 YACQSLVLVSIFATLSCLFAAEQLLIWSASAFITKVLLVPLIMTYAARNIPQNIPEKALF 93 +A +S V+ ++ A + +L I +A + + ++P+++ R++ N L Sbjct: 41 FAAESWVIAALSAAIGFYGHYPELFIIAALTALLRGTVLPILLLRIIRDLKLNREFTPLL 100 Query: 94 GPAMMALLAALIVLLCAFVVQPV--KLPMATGLKP-ALAVALGHFLLGLLCIVSQRNILR 150 P+ L+ L+V+ + + +L + + AL G L+G L +V + + Sbjct: 101 QPSSSLLVGGLLVVFSYALAHKIGLRLDLVNSIAVLALTTMFGMKLIGFLMLVLRTEAVS 160 Query: 151 QIFGYCLMENGSHLVLALLAWRAPELVEIGIATDAIFAVIVMVLLARKIWRTHGTLDVNN 210 I G ++ENG L +L P L+E+ I D + V LL R + R GT + Sbjct: 161 SILGLLVIENGIFLGSQILVPGMPLLLEMVILFDLLIIVSTFGLLIRYLHREIGTTSSRD 220 Query: 211 LTALKG 216 LT L G Sbjct: 221 LTRLVG 226 >UniRef50_C4XJS8 Putative hydrogenase-4 component E n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XJS8_DESMR Length = 211 Score = 41.2 bits (95), Expect = 0.025, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 40/78 (51%) Query: 138 GLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATDAIFAVIVMVLLAR 197 GL +V++R L Q+ GY ENG L+ LA + +E+ + D AV VM + Sbjct: 133 GLTLVVARRKALTQVIGYLAAENGIFLLGVPLAAQGSVWLELSVLLDVFVAVFVMGIALH 192 Query: 198 KIWRTHGTLDVNNLTALK 215 I +T ++DV +L+ Sbjct: 193 HINKTFESIDVGRFCSLR 210 >UniRef50_B5YKQ7 Putative uncharacterized protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKQ7_THEYD Length = 214 Score = 39.7 bits (91), Expect = 0.066, Method: Compositional matrix adjust. Identities = 18/69 (26%), Positives = 38/69 (55%) Query: 127 ALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATDAI 186 + + L F+ G +S+R+I++ I + ++ENG H ++ + P+ +EI + + I Sbjct: 120 SFSCGLTLFIYGFCLFMSKRDIVKMIISFFIIENGIHFLIISMIPHMPKFIEISLTFNFI 179 Query: 187 FAVIVMVLL 195 A++ V L Sbjct: 180 IAILFFVYL 188 >UniRef50_Q6APF0 Hypothetical membrane protein n=1 Tax=Desulfotalea psychrophila RepID=Q6APF0_DESPS Length = 217 Score = 39.7 bits (91), Expect = 0.078, Method: Compositional matrix adjust. Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 2/113 (1%) Query: 105 IVLLCAFVVQPVKLPMATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHL 164 I+L+ F+ ++ + G + L A+ G ++++ + Q+ GY ++ENG +L Sbjct: 104 IILVSVFITNYLRPSLNGGEEIVLITAITTMASGFFLMMARTKAITQVIGYLMLENGIYL 163 Query: 165 VLALLAWRAPEL--VEIGIATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALK 215 + L + L VE GI D + V+VM ++ I +D L LK Sbjct: 164 IGTALTKHSHTLYIVEFGILLDILVGVMVMGIILHNINSAFDDVDTTLLGRLK 216 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0AEW2 Hydrogenase-4 component E n=70 Tax=Bacteria RepI... 175 6e-43 UniRef50_Q0W2B7 Hydrogenase, membrane subunit 2-like protein n=1... 167 3e-40 UniRef50_B7R8R0 NADH-ubiquinone/plastoquinone oxidoreductase cha... 163 4e-39 UniRef50_Q1PZL6 Similar to membrane-bound [NiFe]-hydrogenase-4, ... 162 6e-39 UniRef50_Q20XP2 NADH-ubiquinone oxidoreductase, chain 4L n=4 Tax... 158 1e-37 UniRef50_A7GWM9 Hydrogenase-4 component E n=8 Tax=Epsilonproteob... 150 4e-35 UniRef50_B1ZSF0 Hydrogenase 4 membrane component (E) n=1 Tax=Opi... 148 1e-34 UniRef50_Q12F18 Hydrogenase 4 membrane component n=30 Tax=Bacter... 145 1e-33 UniRef50_Q5P2G8 Hydrogenase 4 membrane component n=2 Tax=Betapro... 143 5e-33 UniRef50_B8I2P7 Hydrogenase, membrane subunit 2-like protein n=2... 138 1e-31 UniRef50_A1RWL6 NADH-ubiquinone oxidoreductase, chain 4L n=1 Tax... 138 2e-31 UniRef50_Q2RXM1 NADH-ubiquinone oxidoreductase, chain 4L n=1 Tax... 137 4e-31 UniRef50_C7HZ66 Hydrogenase 4 membrane component (E)-like protei... 136 5e-31 UniRef50_Q609T7 Hydrogenase subunit n=1 Tax=Methylococcus capsul... 134 2e-30 UniRef50_B4UA29 Hydrogenase 4 membrane component (E) n=2 Tax=Aqu... 122 1e-26 UniRef50_C8W238 Hydrogenase 4, membrane component n=1 Tax=Desulf... 121 2e-26 UniRef50_A0LSU3 Hydrogenase subunit n=1 Tax=Acidothermus cellulo... 117 4e-25 UniRef50_Q24ST6 Hydrogenase-4 component E n=2 Tax=Desulfitobacte... 116 5e-25 UniRef50_A5FYC6 Hydrogenase 4 membrane component (E)-like protei... 112 7e-24 UniRef50_C0QBF5 HyfE n=1 Tax=Desulfobacterium autotrophicum HRM2... 112 8e-24 UniRef50_C7LSU7 NAD-dependent dehydrogenase subunit n=2 Tax=Bact... 110 4e-23 UniRef50_A7HGW6 NAD-dependent dehydrogenase subunit n=5 Tax=Bact... 109 7e-23 UniRef50_C1XWY5 Hydrogenase 4 membrane component (E) n=1 Tax=Mei... 107 2e-22 UniRef50_A5GBF7 Hydrogenase 4 membrane component (E)-like protei... 105 8e-22 Sequences not found previously or not previously below threshold: UniRef50_B5EKJ5 Hydrogenase 4 membrane component n=4 Tax=Bacteri... 118 9e-26 UniRef50_C5V247 Hydrogenase 4 membrane component n=4 Tax=Proteob... 112 8e-24 UniRef50_P64681 Uncharacterized protein Rv0085/MT0092 n=17 Tax=A... 97 6e-19 UniRef50_C4XJS8 Putative hydrogenase-4 component E n=1 Tax=Desul... 94 2e-18 UniRef50_D0L1P2 Hydrogenase 4 membrane component (E) n=3 Tax=Pro... 88 2e-16 UniRef50_D2L9G8 NAD-dependent dehydrogenase subunit n=1 Tax=Desu... 87 3e-16 UniRef50_Q6APF0 Hypothetical membrane protein n=1 Tax=Desulfotal... 87 4e-16 UniRef50_C8XAS1 Putative uncharacterized protein n=2 Tax=Actinom... 84 3e-15 UniRef50_B8IYV7 NAD-dependent dehydrogenase subunit n=1 Tax=Desu... 81 3e-14 UniRef50_A7I7D2 Hydrogenase-4 component E n=3 Tax=Methanomicrobi... 81 3e-14 UniRef50_B6WWH1 Putative uncharacterized protein n=1 Tax=Desulfo... 79 8e-14 UniRef50_A6Q6W2 Ni-Fe hydrogenase, membrane subunit HyfE n=3 Tax... 74 3e-12 UniRef50_B0SCU9 Formate hydrogenase, subunit E n=2 Tax=Leptospir... 74 4e-12 UniRef50_A6UVJ8 Putative uncharacterized protein n=1 Tax=Methano... 73 5e-12 UniRef50_B5YKQ7 Putative uncharacterized protein n=1 Tax=Thermod... 73 6e-12 UniRef50_C6PUG5 Hydrogenase, membrane subunit 2-like protein n=1... 71 3e-11 UniRef50_Q2FKS7 Putative uncharacterized protein n=1 Tax=Methano... 64 4e-09 UniRef50_A4YGN8 Hydrogenase 4 membrane component (E)-like protei... 63 6e-09 UniRef50_Q3Z679 Hydrogenase subunit, putative n=5 Tax=Dehalococc... 61 3e-08 UniRef50_B5I9E5 Hydrogenase 4 membrane component (E)-like protei... 59 8e-08 UniRef50_C3NHY0 Putative uncharacterized protein n=9 Tax=Sulfolo... 58 2e-07 UniRef50_Q04P28 Formate hydrogenase, subunit E n=4 Tax=Leptospir... 55 2e-06 UniRef50_Q978D8 Putative uncharacterized protein TVG1530142 n=2 ... 50 4e-05 UniRef50_A9FF75 Hypothetical transmembrane protein, probably inv... 48 3e-04 >UniRef50_P0AEW2 Hydrogenase-4 component E n=70 Tax=Bacteria RepID=HYFE_ECO57 Length = 216 Score = 175 bits (445), Expect = 6e-43, Method: Composition-based stats. Identities = 216/216 (100%), Positives = 216/216 (100%) Query: 1 MTGSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIW 60 MTGSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIW Sbjct: 1 MTGSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIW 60 Query: 61 SASAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPM 120 SASAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPM Sbjct: 61 SASAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPM 120 Query: 121 ATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIG 180 ATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIG Sbjct: 121 ATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIG 180 Query: 181 IATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 IATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG Sbjct: 181 IATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 >UniRef50_Q0W2B7 Hydrogenase, membrane subunit 2-like protein n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W2B7_UNCMA Length = 220 Score = 167 bits (422), Expect = 3e-40, Method: Composition-based stats. Identities = 54/214 (25%), Positives = 103/214 (48%) Query: 3 GSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSA 62 G+ I+N LA ++ LT+ +++ A QSL L + A ++ + + + +A Sbjct: 7 GNNIINGLAVVIFLTTFLIVAHTRLYPWVRTLAIQSLALGLLGAAVAYFTGSPHIYLVAA 66 Query: 63 SAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMAT 122 I K ++P + Y I + + + L+A + +L F+ +P+ + Sbjct: 67 LTIIIKAFIIPRFIEYTMNRINVDREVEMMLNVPASLLVAGGLAILSYFITEPIIAQGSA 126 Query: 123 GLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIA 182 K LA+++ L+G ++S+R + QI G +MENG L ++ P +VEIG+ Sbjct: 127 ITKNCLAISIAVVLIGFFIMISRRKAITQIMGLMVMENGLFLAAISTSYGMPLIVEIGVF 186 Query: 183 TDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 D + V++M + A +I +T T+D L L+ Sbjct: 187 FDILVGVLIMGIFAFQINKTFDTIDTGILRRLRD 220 >UniRef50_B7R8R0 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L family protein n=4 Tax=Firmicutes RepID=B7R8R0_9THEO Length = 238 Score = 163 bits (413), Expect = 4e-39, Method: Composition-based stats. Identities = 98/216 (45%), Positives = 144/216 (66%), Gaps = 1/216 (0%) Query: 1 MTGSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIW 60 M+G+ IVN L+ L++LTS+ V+ + R++ Y QSLVLV+IF +++ A+ L IW Sbjct: 24 MSGTNIVNVLSVLLILTSMLVVETRKLRMAAYMYRFQSLVLVTIFLSIAVFMEAKPLYIW 83 Query: 61 SASAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPM 120 S +A ITK LVP ++ + E + +LA I+ L VV+P + Sbjct: 84 SITALITKTFLVPYLILKVIERVK-EQEEGVAIDRKLTIILAVGILALSFAVVEPFHMQA 142 Query: 121 ATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIG 180 L+ ALAV++ HF+LGLLCI++++N L+QI GYCLMENGSHL LA++A+ APE VEIG Sbjct: 143 VLKLRVALAVSIAHFMLGLLCILARKNALKQILGYCLMENGSHLTLAIMAYNAPETVEIG 202 Query: 181 IATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 I TDA+FAV++M ++AR++++ GTLD + LT LKG Sbjct: 203 ILTDAVFAVLIMTIIARRLFKDFGTLDTDKLTLLKG 238 >UniRef50_Q1PZL6 Similar to membrane-bound [NiFe]-hydrogenase-4, subunit E n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZL6_9BACT Length = 221 Score = 162 bits (411), Expect = 6e-39, Method: Composition-based stats. Identities = 45/215 (20%), Positives = 99/215 (46%) Query: 1 MTGSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIW 60 + S I++ LA LM++T++ +I + A +S +L ++ L + I Sbjct: 6 IVNSQIIDVLAVLMLMTTIILIGTSRLKTCIWASAIRSFLLTLTSGLIAYLSGIHHIYIT 65 Query: 61 SASAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPM 120 + + + KV ++P + Y + ++ + L++ I+L+ + P+ Sbjct: 66 TGISLVLKVFVIPGFLFYIVDKVRIKKEVESYISYTLSLLISCGIILIAYYATLPIIQFE 125 Query: 121 ATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIG 180 ++ L V+L LLG +++++ + QI G ME+G ++ P +VE+G Sbjct: 126 NVFMRHCLPVSLAITLLGFFAMITRKKAITQILGLITMEDGLFFAALSTSYGMPLIVELG 185 Query: 181 IATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALK 215 + D + +VI+M + +I + ++DV L+ Sbjct: 186 VFFDILVSVIIMGVYVYRIKESFDSIDVGFFRELR 220 >UniRef50_Q20XP2 NADH-ubiquinone oxidoreductase, chain 4L n=4 Tax=Bacteria RepID=Q20XP2_RHOPB Length = 217 Score = 158 bits (399), Expect = 1e-37, Method: Composition-based stats. Identities = 121/217 (55%), Positives = 154/217 (70%), Gaps = 1/217 (0%) Query: 1 MTGSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIW 60 M+G IVN LAGL+++TSL V+ + S FYA QSLVLV++F L A QL IW Sbjct: 1 MSGLQIVNGLAGLLIVTSLLVVVARKPSQSAKFYALQSLVLVAVFVALGSATNAPQLYIW 60 Query: 61 SASAFITKVLLVPLIMTYAARNI-PQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLP 119 +A AF+TKV+LVP+IM + + + + PA+ LLAA++VLLC ++ V LP Sbjct: 61 AAVAFVTKVVLVPVIMARSFGRLSDERLGTGERISPAVTVLLAAVVVLLCTLIISGVTLP 120 Query: 120 MATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEI 179 A G+KPALA++L HF GL CIV+QRNIL+Q+FGYCLMENGSHL LALLA APELVEI Sbjct: 121 AAAGIKPALAISLAHFFFGLACIVTQRNILKQVFGYCLMENGSHLTLALLAGSAPELVEI 180 Query: 180 GIATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 GI TDA+FAV++MV+LA +I R TLD + LT LKG Sbjct: 181 GITTDAVFAVVIMVILATQINRKLATLDADQLTTLKG 217 >UniRef50_A7GWM9 Hydrogenase-4 component E n=8 Tax=Epsilonproteobacteria RepID=A7GWM9_CAMC5 Length = 220 Score = 150 bits (378), Expect = 4e-35, Method: Composition-based stats. Identities = 80/213 (37%), Positives = 132/213 (61%), Gaps = 1/213 (0%) Query: 5 MIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASA 64 I++ LA M++TSL V +++ +LS YA Q+L+LVSIF LS F AEQL +W+ A Sbjct: 8 EILDTLAICMIVTSLAVFGLRNLKLSVIVYAIQTLLLVSIFFLLSKKFDAEQLSMWAIVA 67 Query: 65 FITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGL 124 F TKV+LVP I+ + + + ++ + G + ++A L + + P+ L + Sbjct: 68 FFTKVILVPGILLWLIKKLNVVSEDEPVGGFFVSPIIAMGFSLALSMSIHPIFLKFSLIK 127 Query: 125 KPALAVALGH-FLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIAT 183 + + +A G F++G+ + + + ++QI YCL ENG HL LAL+A+ + ELVE+GI T Sbjct: 128 EEIMLIAAGTIFMMGIFGFMLRNSFIKQILAYCLFENGIHLSLALMAYNSHELVELGILT 187 Query: 184 DAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 DAIFAVI+M +LA + ++ + +LD + + L+G Sbjct: 188 DAIFAVIIMSVLAIRFYKAYDSLDTSKASNLRG 220 >UniRef50_B1ZSF0 Hydrogenase 4 membrane component (E) n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZSF0_OPITP Length = 222 Score = 148 bits (373), Expect = 1e-34, Method: Composition-based stats. Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 2/215 (0%) Query: 2 TGSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWS 61 T S ++ A +M++ L ++ + + +A QSL+L +I A + + A + + + Sbjct: 8 TSSQLITLFASVMLVLQLLIVVQRMLITNIRLFAMQSLLLAAIAAVVGYTYGAWHVYVVA 67 Query: 62 ASAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMA 121 + KVL +P + R + + L+ + +L V +P Sbjct: 68 VLTLLGKVLFLPWWLHRLVRQMKVEQEVQPFVNMPASMLICGALTVLACVVARPFTSLER 127 Query: 122 TGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVL-ALLAWRAPELVEIG 180 G LAVAL L G ++++R + Q+ MENG L AL + P +VEIG Sbjct: 128 LG-SNTLAVALALLLTGFFLMINRRKAITQVLALLTMENGMMLAAIALTTYGMPFVVEIG 186 Query: 181 IATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALK 215 I D + AV+V+ +L +I + ++DV+ L LK Sbjct: 187 IFFDVVVAVMVLGILVFRIRESFASMDVSKLNKLK 221 >UniRef50_Q12F18 Hydrogenase 4 membrane component n=30 Tax=Bacteria RepID=Q12F18_POLSJ Length = 219 Score = 145 bits (365), Expect = 1e-33, Method: Composition-based stats. Identities = 45/213 (21%), Positives = 92/213 (43%) Query: 4 SMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSAS 63 + VN L ++++ + +I+ + + Q LV + + L I + Sbjct: 6 TQFVNLLGAVLLMLAFAMIAQRRILSLIHLFTMQGATLVLATGVVGYVTNQPHLYISAGV 65 Query: 64 AFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATG 123 F+ KVLL+P ++ + + L L+ ++V+ + P+ + Sbjct: 66 TFVLKVLLIPYLLHRVIDRLNIRWDVETLINIPTTMLIGIVVVIFAFDLAMPIARLSSAL 125 Query: 124 LKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIAT 183 L +AL LL L ++++ + Q+ G+ MENG + P +VE+GIA Sbjct: 126 ASGTLGIALACVLLSFLMMITRAKAVPQVIGFLAMENGLFFAATSATYGMPMVVELGIAL 185 Query: 184 DAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 D + V+++ + +I +LD+++L LK Sbjct: 186 DVLIGVLILGVFMFQIREQFDSLDISHLEKLKD 218 >UniRef50_Q5P2G8 Hydrogenase 4 membrane component n=2 Tax=Betaproteobacteria RepID=Q5P2G8_AZOSE Length = 219 Score = 143 bits (360), Expect = 5e-33, Method: Composition-based stats. Identities = 44/212 (20%), Positives = 93/212 (43%) Query: 4 SMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSAS 63 + +N A ++++ + +I+ + + Q L + + L L +A Sbjct: 6 AQSINLFAVVLLVLAFAMIAQRRILTLIHLFTLQGAALAAATLIVGFLTGQHHLYYSAAM 65 Query: 64 AFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATG 123 F+ KV+L+P+++ + + LF L+ ++V+ + P+ A+ Sbjct: 66 TFVLKVILIPILLHRVIERLNVRWDVETLFNIPTTMLIGIVLVIFAFNLAAPIAGLSASI 125 Query: 124 LKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIAT 183 + L +AL LL L ++ + + Q+ G+ MENG P +VE+GIA Sbjct: 126 ARGTLGIALACVLLSFLMMIVRAKAVPQVIGFLSMENGLFFAATAATSGMPMIVELGIAF 185 Query: 184 DAIFAVIVMVLLARKIWRTHGTLDVNNLTALK 215 D + ++++ + +I +LD+ +L LK Sbjct: 186 DVLVGILILGVFMFQIREQFDSLDIRHLEKLK 217 >UniRef50_B8I2P7 Hydrogenase, membrane subunit 2-like protein n=2 Tax=Clostridium RepID=B8I2P7_CLOCE Length = 220 Score = 138 bits (348), Expect = 1e-31, Method: Composition-based stats. Identities = 52/218 (23%), Positives = 105/218 (48%), Gaps = 5/218 (2%) Query: 4 SMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLF-----AAEQLL 58 + ++N LA L++++S +++ K + QS++L I +S +++ Sbjct: 3 NNVLNLLAILILISSFTLVANKRQNAYITTFRMQSVLLALISLIVSVKSMVESKKFDEVF 62 Query: 59 IWSASAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKL 118 + KV L+P++M + + + + + L+ +V+LC +VV ++ Sbjct: 63 FIFLLIVVFKVFLIPMVMRRTSNRVEYKVEKDFFINIPISMLICCGLVVLCWYVVFNIEG 122 Query: 119 PMATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVE 178 + L +L ++GL ++S++ L QI G+ ++ENG L L P +VE Sbjct: 123 ITNPATENYLIYSLSVVMIGLFFMISRKKALGQIIGFLVIENGLFLSAMLTTGGMPMIVE 182 Query: 179 IGIATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 +G+ D + A ++M + KI T ++D+N L LKG Sbjct: 183 LGLFFDLLTAFLIMGIFVFKINNTFNSIDINKLKQLKG 220 >UniRef50_A1RWL6 NADH-ubiquinone oxidoreductase, chain 4L n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWL6_THEPD Length = 212 Score = 138 bits (347), Expect = 2e-31, Method: Composition-based stats. Identities = 73/210 (34%), Positives = 116/210 (55%), Gaps = 7/210 (3%) Query: 7 VNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASAFI 66 + A LM+LT+ ++ ++ R + Y Q+L+L SIF LS + +W +A + Sbjct: 8 IGACAALMVLTASYINEERNLRRATYAYCVQTLLLASIFFMLSTV--EWYFALWGLTAIL 65 Query: 67 TKVLLVPLIMTYAARNIPQNIPEKALFGP-AMMALLAALIVLLCAFVVQPVKLPMATGLK 125 TK +LVP + + + + E+ G A LL ALI + A + V + Sbjct: 66 TKAVLVPYFILRTTKRVDAVVEEEPYLGGWASHILLGALIAIGFAIGTRIVSGWESV--- 122 Query: 126 PALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATDA 185 L+V++ FL+GL +V++R+ L+QI G C ENGSHL LA++A PE VE+G+ TDA Sbjct: 123 -PLSVSVALFLIGLHLMVTRRDALKQILGICHFENGSHLTLAVMAPGLPETVEVGVLTDA 181 Query: 186 IFAVIVMVLLARKIWRTHGTLDVNNLTALK 215 + V+V LLA ++ + GTLD L+ L+ Sbjct: 182 VLLVLVCCLLAEEMKKVVGTLDTGRLSLLR 211 >UniRef50_Q2RXM1 NADH-ubiquinone oxidoreductase, chain 4L n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RXM1_RHORT Length = 221 Score = 137 bits (344), Expect = 4e-31, Method: Composition-based stats. Identities = 50/214 (23%), Positives = 102/214 (47%), Gaps = 8/214 (3%) Query: 10 LAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASAFITKV 69 ++ L+++TS V+ + + + Y CQS+++ +F L W+ +A ++K Sbjct: 9 ISLLLIVTSFVVVEWRYLKGAIFTYQCQSVLMALMFVLYGTALDNHALYYWAGTALVSKG 68 Query: 70 LLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQP-------VKLPMAT 122 +++P ++ + + + G A+ +LA ++ L + + Sbjct: 69 VIIPWLLRQYVNKVGAE-ETRPMMGAALSFILAVVVAALAFWWTFNHHDDLVITAELIGE 127 Query: 123 GLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIA 182 + LAVA ++G ++++R+ + + G CL+EN HL LA LA E IG+ Sbjct: 128 PYRLNLAVAAVVLVIGFYALLTRRDAFKIVIGLCLLENAVHLSLASLAPTIAETAMIGVV 187 Query: 183 TDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 TD + +V +M+ + R I+ G+ D N++ L G Sbjct: 188 TDVVISVWMMLYVVRSIYGAVGSTDTTNISQLNG 221 >UniRef50_C7HZ66 Hydrogenase 4 membrane component (E)-like protein n=1 Tax=Thiomonas intermedia K12 RepID=C7HZ66_THIIN Length = 273 Score = 136 bits (342), Expect = 5e-31, Method: Composition-based stats. Identities = 42/192 (21%), Positives = 85/192 (44%) Query: 24 VKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASAFITKVLLVPLIMTYAARNI 83 + +A Q +LV+ ++ +L +A + KV+++PL++ R + Sbjct: 80 QRRVVNLVNLFAAQGALLVASTVVVAYSTGDAELYQSAALTLLLKVIVLPLVLHKLIRRL 139 Query: 84 PQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGLKPALAVALGHFLLGLLCIV 143 + L + L+ ++V+ + QP+ ++ L +AL LL L ++ Sbjct: 140 HAEWDTETLVNIPTLQLIGIVLVIFSFVLAQPISRFAGEAMRGTLGIALALVLLAFLMMI 199 Query: 144 SQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATDAIFAVIVMVLLARKIWRTH 203 +R + Q+ G+ MENG P +VE+GI D + V ++ + +I Sbjct: 200 VRRKAVAQVVGFLAMENGLLFAATSATQGMPMVVELGIGLDVLVGVFILGIFFFQIREQF 259 Query: 204 GTLDVNNLTALK 215 +LD+ N+ +LK Sbjct: 260 DSLDLQNMESLK 271 >UniRef50_Q609T7 Hydrogenase subunit n=1 Tax=Methylococcus capsulatus RepID=Q609T7_METCA Length = 225 Score = 134 bits (337), Expect = 2e-30, Method: Composition-based stats. Identities = 49/210 (23%), Positives = 98/210 (46%) Query: 5 MIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASA 64 + +A L++ TS ++ K +A Q +L + A + L I + Sbjct: 11 QAILFIAALVVFTSFLMLGQKRLSGMIHLFAAQGALLAATTALAAYALPYPHLYISALII 70 Query: 65 FITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGL 124 KV+L+P ++ + + + L+ + + AA +V+ +VV+P++ Sbjct: 71 MALKVILIPAMLHRLIVRLDMHRDAEPLYLYGYVMMAAAALVMFSYYVVEPIEHLSTLAT 130 Query: 125 KPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATD 184 + A+AV+L LLG+L ++++R ++ + G+ +ENG P +VE+GIA D Sbjct: 131 RNAMAVSLAVVLLGMLLMITRRQVVTHVIGFMAIENGLFFAAVASTQGMPMVVELGIAFD 190 Query: 185 AIFAVIVMVLLARKIWRTHGTLDVNNLTAL 214 + A ++ + I + +LDV+ L L Sbjct: 191 VLVAAVIFGVFFFHIRSSIDSLDVDRLNRL 220 >UniRef50_B4UA29 Hydrogenase 4 membrane component (E) n=2 Tax=Aquificales RepID=B4UA29_HYDS0 Length = 222 Score = 122 bits (306), Expect = 1e-26, Method: Composition-based stats. Identities = 44/217 (20%), Positives = 88/217 (40%), Gaps = 2/217 (0%) Query: 1 MTGSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIW 60 ++ S V +A L + ++ + + Y QS+ L + +L++ Sbjct: 5 ISLSEFVEFMAALSLFFAILQTASHRLDFAIKTYTAQSIALSITMFLSVFYYFDYELILS 64 Query: 61 SASAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQP--VKL 118 + + K +L+P +M I ++ K L+ IV+ ++ Sbjct: 65 AVLTLLIKGILIPFVMKKITDKIVEDENVKPFINFTYSVLICIFIVIFSFYITSNTFYHS 124 Query: 119 PMATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVE 178 ++ LA+ L +G+ +++++ L QI G+ +ENG L P +VE Sbjct: 125 TDNGTMQKVLAIGLSIIFVGIFLMLARKKALIQIIGFLTLENGIILGATSTVKGLPLIVE 184 Query: 179 IGIATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALK 215 IG+ D I+ +L I T ++D + L+ LK Sbjct: 185 IGVFFDVFVGAIMAGILIFHIKDTLESIDTSKLSDLK 221 >UniRef50_C8W238 Hydrogenase 4, membrane component n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W238_DESAS Length = 214 Score = 121 bits (303), Expect = 2e-26, Method: Composition-based stats. Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 3/213 (1%) Query: 6 IVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAE--QLLIWSAS 63 +V+ LA + +++ L +++ KS + A QSL L S+ + A + + Sbjct: 3 VVDFLAVVFLMSGLLMLAGKSIPNNINLLAVQSLALSSMAFYMGYNQGANGTHMFLVGGL 62 Query: 64 AFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATG 123 + KV+++P ++ ++ + G L+ L++ L PV L G Sbjct: 63 TLLIKVVILPWVLFKLVYSVKVDREASLSVGLIPSILIGILLIGLSYDYAVPVLLEELPG 122 Query: 124 LKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIAT 183 L+ AL LLG ++S+R + Q+ G +MENG L + P ++E+GI Sbjct: 123 GH-LLSAALSTVLLGCFFMISRRTAISQLIGIVVMENGLFLCAVAVTGGMPLIIELGIFF 181 Query: 184 DAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 D + +VM ++ +I T TLD L LKG Sbjct: 182 DVLVGALVMGIMTYQIRGTFDTLDTKYLNKLKG 214 >UniRef50_B5EKJ5 Hydrogenase 4 membrane component n=4 Tax=Bacteria RepID=B5EKJ5_ACIF5 Length = 225 Score = 118 bits (297), Expect = 9e-26, Method: Composition-based stats. Identities = 38/192 (19%), Positives = 83/192 (43%) Query: 24 VKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASAFITKVLLVPLIMTYAARNI 83 + A Q +VL + A ++ L +L +A K +L+P ++ R + Sbjct: 32 QRRLLTLIHLLAWQGVVLATGTALVALLTGQTELWFSAALTLGLKAILIPTVLHRLLRRL 91 Query: 84 PQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGLKPALAVALGHFLLGLLCIV 143 +A+ + L +V+ + P+ + + +AL LL L ++ Sbjct: 92 QVRGDVEAVLNIPLTLLAGIALVIFAFSLAAPITALTGPVTRGMVGIALAAVLLAFLMMI 151 Query: 144 SQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATDAIFAVIVMVLLARKIWRTH 203 ++R + Q+ G+ ++NG P +VE+G+A DA+ +++ + +I T Sbjct: 152 TRRKAISQVVGFLAVDNGLFFAATSATLGMPMIVELGVALDALIGFVILGVFFFQIRETF 211 Query: 204 GTLDVNNLTALK 215 ++D+ NL ++ Sbjct: 212 DSMDLQNLEHIR 223 >UniRef50_A0LSU3 Hydrogenase subunit n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LSU3_ACIC1 Length = 224 Score = 117 bits (292), Expect = 4e-25, Method: Composition-based stats. Identities = 50/211 (23%), Positives = 93/211 (44%) Query: 6 IVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASAF 65 + + +A L++L ++ YA QSL+L + A + L + + Sbjct: 14 VADVIAVLVLLAEFGMLRAALLPAQIRLYAGQSLLLAVLAAIAAQQRNVPDLYALAVLSA 73 Query: 66 ITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGLK 125 + KVL VP ++ R+ +I + G A L A L F + + A + Sbjct: 74 VLKVLAVPAVLRRMLRDTGTDIAGSGVLGVATRTLCALLATAFGFFATAGLPIRAAVLPR 133 Query: 126 PALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATDA 185 AL++A+ L+ + ++ +R+++ Q G+ MEN L ++A P L+E+ + D Sbjct: 134 TALSLAVAAVLVAFILMIFRRDVVSQAVGFFSMENAVSLASLVIAATMPFLLEVVLLFDL 193 Query: 186 IFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 + AV+V L R +L L+ L+G Sbjct: 194 LVAVVVFSALIRIHHNRRQSLSTRKLSGLRG 224 >UniRef50_Q24ST6 Hydrogenase-4 component E n=2 Tax=Desulfitobacterium hafniense RepID=Q24ST6_DESHY Length = 218 Score = 116 bits (291), Expect = 5e-25, Method: Composition-based stats. Identities = 44/203 (21%), Positives = 94/203 (46%) Query: 14 MMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASAFITKVLLVP 73 ++ L+++ + + + Q++ L ++ + ++L + + + K ++P Sbjct: 16 LLALGLYIVGCVKLKKALMGWTWQAVFLSALIFLEGVKESEWEILAIALLSLLVKGGVIP 75 Query: 74 LIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGLKPALAVALG 133 ++ A + + AA + +L + QP+ + L+ LA+A Sbjct: 76 WVLKRTADLSHTQWVGEVFLHRTSSLVAAAALTILAYAITQPLLSLVEPALRNGLAIAFA 135 Query: 134 HFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATDAIFAVIVMV 193 GLL +V ++ L Q+ G L++NG L LL P LVE+G+ D + V+++ Sbjct: 136 LLFYGLLLMVIRKVALVQVVGILLIDNGIFLAGFLLTSGMPLLVEVGVIFDVLIGVLILG 195 Query: 194 LLARKIWRTHGTLDVNNLTALKG 216 +LA+++ +L+V L +LKG Sbjct: 196 VLAQRMILKFDSLNVERLNSLKG 218 >UniRef50_A5FYC6 Hydrogenase 4 membrane component (E)-like protein n=18 Tax=Bacteria RepID=A5FYC6_ACICJ Length = 229 Score = 112 bits (281), Expect = 7e-24, Method: Composition-based stats. Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 1/211 (0%) Query: 6 IVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASAF 65 + + LAG ++L SL ++ A + +L + L A +L I +A A Sbjct: 17 LAHVLAGALVLVSLMMLYQDRLPALVNVLALHAALLGVAVGWQAWLQRAPELYITAAIAI 76 Query: 66 ITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGLK 125 K + +PL + + + + + G ++ L +V L V+ + Sbjct: 77 GFKAVAIPLALHRIIERLDIHREVETVGGISLTMLAGIGLVALSLLVMLRTAAQANALAR 136 Query: 126 PALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATDA 185 LA+AL L+G+L +V++RN + QI G+ ++ENG L A A P +VEI +A Sbjct: 137 EDLALALSVILIGMLMMVTRRNAVSQIAGFMMLENGLILAAAG-AQGMPLVVEISVAFSI 195 Query: 186 IFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 + A IV+ + +I T+D L A +G Sbjct: 196 LIAFIVIGVFLFRIRERFDTVDSAALDAFRG 226 >UniRef50_C0QBF5 HyfE n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QBF5_DESAH Length = 215 Score = 112 bits (281), Expect = 8e-24, Method: Composition-based stats. Identities = 41/213 (19%), Positives = 88/213 (41%) Query: 4 SMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSAS 63 + N L L++L + ++S Q+++L + +L+I Sbjct: 2 TSTFNFLVILLILLNFRLLSSSRLTPCIHILMMQAVILTCVTWLTHQSNMDIRLMILLGV 61 Query: 64 AFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATG 123 K + +P +++ A + + G ++ A ++ + +P+ L Sbjct: 62 NIALKAIAMPWMLSRVAHKTAISRELDPIVGYTASLIIGAFLLGFSVLISRPLYLSHTVV 121 Query: 124 LKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIAT 183 L V+L GL ++++ + Q+ GY +MENG + +A + P +VE+ + Sbjct: 122 ETLFLPVSLFTMFSGLFMTIARKKAITQVLGYMVMENGIYTFGMAMAIQEPFIVELSVLL 181 Query: 184 DAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 D AV++M + I R +D + L+ L+ Sbjct: 182 DVFVAVLIMGVAIFHISREFDHMDTDRLSVLRD 214 >UniRef50_C5V247 Hydrogenase 4 membrane component n=4 Tax=Proteobacteria RepID=C5V247_9PROT Length = 222 Score = 112 bits (281), Expect = 8e-24, Method: Composition-based stats. Identities = 47/212 (22%), Positives = 87/212 (41%) Query: 5 MIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASA 64 VN LA LM+L +++ + +A Q +L ++ A L + Sbjct: 8 QFVNLLASLMLLVVFAMLAQRRILSLINLFAWQGGILALSTFVVAYSTAQHHLYYSAGLT 67 Query: 65 FITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGL 124 I KVLL+P ++ R + + L L+ +V+ + P+ Sbjct: 68 LILKVLLLPWLLHRLIRKLNVRWDVETLINIPTTMLVGIGLVIFSFNLAAPISQLSEGIT 127 Query: 125 KPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATD 184 + + +AL LL LL ++++R + Q+ + +EN P +VE GIA D Sbjct: 128 RGLIGIALASVLLSLLMMLTRRKAVSQVVAFLSLENSLFFAATSATQGMPLVVEFGIALD 187 Query: 185 AIFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 + A + + +I T +LD+ ++ LK Sbjct: 188 VLVATFIFGIFFFQIRETFESLDITHMEKLKD 219 >UniRef50_C7LSU7 NAD-dependent dehydrogenase subunit n=2 Tax=Bacteria RepID=C7LSU7_DESBD Length = 214 Score = 110 bits (274), Expect = 4e-23, Method: Composition-based stats. Identities = 49/212 (23%), Positives = 88/212 (41%) Query: 4 SMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSAS 63 + +N L GL M +L + + A Q ++L + L +L++ + + Sbjct: 2 NDTLNLLIGLAMGFNLLALGTSRLPVLIRAVAIQGVLLGLLPLVLEAHALDWRLVLITLA 61 Query: 64 AFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATG 123 K +L+P ++ A R + G LL A + + + + L Sbjct: 62 TVAGKGVLIPFMLIRAMRAANIARELEPYIGYIPSLLLGAAGTIAAVALTRYLPLLPEHA 121 Query: 124 LKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIAT 183 + A+ L G + ++ + + Q+ GY ++ENG +L LL P LVE GI Sbjct: 122 GNLHVPGAMALILTGFILLIGRTKAISQVCGYLILENGIYLAGLLLIRSTPILVEFGILL 181 Query: 184 DAIFAVIVMVLLARKIWRTHGTLDVNNLTALK 215 D + V+ ++ +I R +LD LTAL Sbjct: 182 DVTVGIFVIGIIVDRIQRAFDSLDTRKLTALH 213 >UniRef50_A7HGW6 NAD-dependent dehydrogenase subunit n=5 Tax=Bacteria RepID=A7HGW6_ANADF Length = 215 Score = 109 bits (272), Expect = 7e-23, Method: Composition-based stats. Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 1/211 (0%) Query: 7 VNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFAT-LSCLFAAEQLLIWSASAF 65 V+ + L+++ LF+++ + A Q +L ++ + L+ + A Sbjct: 5 VDLVFILVVVIDLFLLASSRLGAAIRTVAIQGALLAALPLLLVGEGHHLGHALLLAGGAL 64 Query: 66 ITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGLK 125 K +P +M A R + + G +L + V L + LP A Sbjct: 65 AIKGAFIPWLMFRAIREASIRREMEPIVGFVPSMVLGGVGVALAFAFSSRLPLPSAGAHA 124 Query: 126 PALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATDA 185 + AL GLL +V+++ + Q+ G+ ++ENG ++ LL+ P +VE G+ D Sbjct: 125 FLVPTALSTVWAGLLLVVTRKKAVSQVLGFLVLENGVYVFGLLLSDVMPVMVEAGVLLDL 184 Query: 186 IFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 AV VM ++ I R +LD L+ALK Sbjct: 185 FAAVFVMGIVMFHINREFSSLDTEKLSALKD 215 >UniRef50_C1XWY5 Hydrogenase 4 membrane component (E) n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XWY5_9DEIN Length = 193 Score = 107 bits (268), Expect = 2e-22, Method: Composition-based stats. Identities = 46/196 (23%), Positives = 86/196 (43%), Gaps = 3/196 (1%) Query: 21 VISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASAFITKVLLVPLIMTYAA 80 ++ KS YA ++ L L++ + + K + +P + + Sbjct: 1 MVGRKSLDAWIRLYAL--QNVLLALLALVLAEGERHLVLAGVALLLIKGVFIPRYLFWLL 58 Query: 81 RNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGLKPALAVALGHFLLGLL 140 + + ++ + LL ++V + V L A + A+ VALG LLG+L Sbjct: 59 ERLGISHEVESYLSIPLSLLLGGVLVAVGFRVGSSFVLEGARLPE-AVPVALGLILLGML 117 Query: 141 CIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATDAIFAVIVMVLLARKIW 200 + S++ + Q+ G+ +ENG L+ P +E+G+A DA AV++ +L +I Sbjct: 118 SMASRKKAVTQVLGFLALENGVFLLALAETHGLPLFIELGVALDAFAAVVLAGVLISRIQ 177 Query: 201 RTHGTLDVNNLTALKG 216 T G +D + LKG Sbjct: 178 STFGHIDTARMRDLKG 193 >UniRef50_A5GBF7 Hydrogenase 4 membrane component (E)-like protein n=10 Tax=Desulfuromonadales RepID=A5GBF7_GEOUR Length = 214 Score = 105 bits (263), Expect = 8e-22, Method: Composition-based stats. Identities = 46/215 (21%), Positives = 87/215 (40%), Gaps = 2/215 (0%) Query: 1 MTGSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIW 60 M + + L L+ML + V+ ++ A Q +VL + A + + L+ Sbjct: 1 MIMTEFADQLLVLVMLINFLVLGSSRMAIAIRAVAVQGVVLGVLPAIIHTF--SWHLIAI 58 Query: 61 SASAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPM 120 + K L +P ++ A + + G ++ A+ L + L Sbjct: 59 IVGMILAKGLFIPWLLFGAMNKVQIKREVEPYIGYVSTLIIVAITTALAFVFAAKLPLAQ 118 Query: 121 ATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIG 180 + ++ + G L + ++R + Q+ GY ++ENG + LL P +VE G Sbjct: 119 EHQGLLFVPASIATIITGFLTLTTRRKAISQVIGYLILENGIFIFGLLLTSAMPVMVEAG 178 Query: 181 IATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALK 215 D + + VM ++ I T+D + LTALK Sbjct: 179 ALLDLLVGIFVMGIVINHISNEFSTIDTSRLTALK 213 >UniRef50_P64681 Uncharacterized protein Rv0085/MT0092 n=17 Tax=Actinomycetales RepID=Y085_MYCTU Length = 220 Score = 96.6 bits (239), Expect = 6e-19, Method: Composition-based stats. Identities = 49/214 (22%), Positives = 91/214 (42%), Gaps = 1/214 (0%) Query: 4 SMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSAS 63 S++V+ AG ++L S+ ++ + R A Q L +I L+ + Sbjct: 7 SILVDFAAGGLVLASVLIVWRRDLRAIVRLLAWQGAALAAIPLLRGIRDNDRALIAVGIA 66 Query: 64 AFITKVLLVPLIMTYAARNIPQ-NIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMAT 122 + L++P ++ A L A L+ A + L + QPV Sbjct: 67 VLALRALVLPWLLARAVGAEAAAQREATPLVNTASSLLITAGLTLTAFAITQPVVNLEPG 126 Query: 123 GLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIA 182 A+ A L+ L + ++ + + Q G+ +++NG LL P +VE+G + Sbjct: 127 VTINAVPAAFAVVLIALFVMTTRLHAVSQAAGFLMLDNGIAATAFLLTAGVPLIVELGAS 186 Query: 183 TDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 D +FAVIV+ +L ++ R G D++ L L+ Sbjct: 187 LDVLFAVIVIGVLTGRLRRIFGDADLDKLRELRD 220 >UniRef50_C4XJS8 Putative hydrogenase-4 component E n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XJS8_DESMR Length = 211 Score = 94.3 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 42/195 (21%), Positives = 76/195 (38%), Gaps = 2/195 (1%) Query: 22 ISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASAFITKVLLVPLIMTYAAR 81 ++V + A Q ++L + ++ L+ S + K + P ++ Sbjct: 19 LAVTRLKTLTRITALQGVLLAATPLAIAGPHG--HGLVLSLAVLAIKGIGFPWLVARTLS 76 Query: 82 NIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGLKPALAVALGHFLLGLLC 141 + N + FG M L +L ++ + P AL GL Sbjct: 77 RLEVNPVVEPYFGFNMSLLAGVGGLLFSLWLESRLPFPPGLFPPLLFPAALTSIFSGLTL 136 Query: 142 IVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATDAIFAVIVMVLLARKIWR 201 +V++R L Q+ GY ENG L+ LA + +E+ + D AV VM + I + Sbjct: 137 VVARRKALTQVIGYLAAENGIFLLGVPLAAQGSVWLELSVLLDVFVAVFVMGIALHHINK 196 Query: 202 THGTLDVNNLTALKG 216 T ++DV +L+ Sbjct: 197 TFESIDVGRFCSLRD 211 >UniRef50_D0L1P2 Hydrogenase 4 membrane component (E) n=3 Tax=Proteobacteria RepID=D0L1P2_HALNC Length = 226 Score = 88.1 bits (217), Expect = 2e-16, Method: Composition-based stats. Identities = 50/216 (23%), Positives = 94/216 (43%), Gaps = 3/216 (1%) Query: 4 SMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSAS 63 S I + L + ++ + ++ R +A +S V+ ++ A + +L I +A Sbjct: 11 SSIFSFLVIVALILAFVMLGSHWIRNHVYAFAAESWVIAALSAAIGFYGHYPELFIIAAL 70 Query: 64 AFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLP---M 120 + + ++P+++ R++ N L P+ L+ L+V+ + + L + Sbjct: 71 TALLRGTVLPILLLRIIRDLKLNREFTPLLQPSSSLLVGGLLVVFSYALAHKIGLRLDLV 130 Query: 121 ATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIG 180 + AL G L+G L +V + + I G ++ENG L +L P L+E+ Sbjct: 131 NSIAVLALTTMFGMKLIGFLMLVLRTEAVSSILGLLVIENGIFLGSQILVPGMPLLLEMV 190 Query: 181 IATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 I D + V LL R + R GT +LT L G Sbjct: 191 ILFDLLIIVSTFGLLIRYLHREIGTTSSRDLTRLVG 226 >UniRef50_D2L9G8 NAD-dependent dehydrogenase subunit n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L9G8_9DELT Length = 216 Score = 87.3 bits (215), Expect = 3e-16, Method: Composition-based stats. Identities = 38/215 (17%), Positives = 80/215 (37%), Gaps = 3/215 (1%) Query: 5 MIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLS---CLFAAEQLLIWS 61 + ++ ++ +L +++ R A Q +L + + L S Sbjct: 2 ELFQSVMVALVCVNLAYLAITRLRTLTRLTAVQGALLALVPLLFAGPETGVGHGHALFLS 61 Query: 62 ASAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMA 121 + F K + P ++ + N + G + + +L ++ + P Sbjct: 62 LAVFAIKGVGFPWLLARTLSRLEVNPVVEPYLGFNLSLVAGVAGLLFSLWLETRLPFPPG 121 Query: 122 TGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGI 181 AL GL +++++ L Q+ GY ENG L+ L+ + +E+ + Sbjct: 122 LFPPLLFPAALTTIFTGLTLVIARQKALTQVIGYLAAENGIFLLGTPLSGQGSVWLELSV 181 Query: 182 ATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 D AV VM + I +T ++DV +L+ Sbjct: 182 LLDVFVAVFVMGIALHHISKTFESIDVGRFCSLRD 216 >UniRef50_Q6APF0 Hypothetical membrane protein n=1 Tax=Desulfotalea psychrophila RepID=Q6APF0_DESPS Length = 217 Score = 87.0 bits (214), Expect = 4e-16, Method: Composition-based stats. Identities = 40/215 (18%), Positives = 82/215 (38%), Gaps = 3/215 (1%) Query: 5 MIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLI-WSAS 63 +++L+ +F + + A Q + I L I + Sbjct: 3 NFTEVTLVIILLSVMFSLGTSRLKTLVTIMAWQGAAVSIIPLFLRDHGDFGAGAIGFFLL 62 Query: 64 AFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATG 123 I K +++P ++ A + + + G I+L+ F+ ++ + G Sbjct: 63 MLIVKGIIIPGLLYVALKRVVIKREIVPIIGYHASIFTGLGIILVSVFITNYLRPSLNGG 122 Query: 124 LKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAP--ELVEIGI 181 + L A+ G ++++ + Q+ GY ++ENG +L+ L + +VE GI Sbjct: 123 EEIVLITAITTMASGFFLMMARTKAITQVIGYLMLENGIYLIGTALTKHSHTLYIVEFGI 182 Query: 182 ATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 D + V+VM ++ I +D L LK Sbjct: 183 LLDILVGVMVMGIILHNINSAFDDVDTTLLGRLKD 217 >UniRef50_C8XAS1 Putative uncharacterized protein n=2 Tax=Actinomycetales RepID=C8XAS1_NAKMY Length = 220 Score = 83.9 bits (206), Expect = 3e-15, Method: Composition-based stats. Identities = 50/214 (23%), Positives = 98/214 (45%), Gaps = 1/214 (0%) Query: 4 SMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSAS 63 + ++N G M+L ++ ++ + + Q L L + A L+ A+ QL + + Sbjct: 7 TQLLNVTVGAMLLCAVIILWRRELAAIISVFLVQGLALAATVALLAVQQASAQLGVVAVL 66 Query: 64 AFITKVLLVPLIMTYAARNIPQ-NIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMAT 122 + +V ++P ++ + + L L+AA + +L V QP+ + Sbjct: 67 VLVLRVGVLPALLRRTLAHAGPGQRETRPLVNEIASLLVAAALTMLAYAVAQPLVALDPS 126 Query: 123 GLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIA 182 A+ AL L+G +V++R L Q+ G+ L++NG V L +VE+GI+ Sbjct: 127 PATHAIPAALAVALIGFFVLVTRRLALSQLVGFLLLDNGITAVGVLTTAELGLVVELGIS 186 Query: 183 TDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 D + V+V+ +L +I + G D++ L L Sbjct: 187 LDVLLVVLVLQVLKTRIRQAFGRTDIDELRELHD 220 >UniRef50_B8IYV7 NAD-dependent dehydrogenase subunit n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8IYV7_DESDA Length = 207 Score = 80.8 bits (198), Expect = 3e-14, Method: Composition-based stats. Identities = 37/194 (19%), Positives = 71/194 (36%), Gaps = 7/194 (3%) Query: 23 SVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASAFITKVLLVPLIMTYAARN 82 A Q ++L ++ +L + + + + K +L+P ++ Sbjct: 21 GTTRLMWLIRLTAFQGILLAAMLLSLDHA-------LLAGAVLLIKGVLLPGLLWRTRER 73 Query: 83 IPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGLKPALAVALGHFLLGLLCI 142 + + A+ L ++L ++ + A L AL GL+ + Sbjct: 74 LHARQRMRPRLHVAVGVLAGMGGLVLSLWLEARLLTLPALFPPLLLPTALTTLFCGLILV 133 Query: 143 VSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATDAIFAVIVMVLLARKIWRT 202 V + L Q+ GY + ENG L+ L E+ + D AV VM + I T Sbjct: 134 VGRTTALAQVIGYLVAENGIFLLGMPLMTAGTIWFELALLLDVFVAVFVMGIAINHISNT 193 Query: 203 HGTLDVNNLTALKG 216 ++DV +L+ Sbjct: 194 FESIDVGRFRSLRD 207 >UniRef50_A7I7D2 Hydrogenase-4 component E n=3 Tax=Methanomicrobia RepID=A7I7D2_METB6 Length = 230 Score = 80.8 bits (198), Expect = 3e-14, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 77/183 (42%), Gaps = 5/183 (2%) Query: 6 IVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASAF 65 +V L +++TS ++I+ ++ YA QSL LV+I L+ A LL + Sbjct: 10 LVKILFVCVIVTSAYIITTRNLVSLVRVYALQSLSLVAIALALAWYENAAILLAIALLTL 69 Query: 66 ITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGLK 125 + KV+++P + I + F +LL +L +++ ++ A Sbjct: 70 VFKVIVIPYFIATVQEKIRIKRDIEFHFLSPASSLLISLALMIVVYITLSRVFSPAPAEG 129 Query: 126 PALA----VALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGI 181 + + ++G++ S++ + ++ GY MENG L P ++E I Sbjct: 130 SLFFFGAVIGISLVMMGMMVTFSRKKAITKVLGYLSMENGVLLFGLFATE-LPFIIEFLI 188 Query: 182 ATD 184 D Sbjct: 189 VID 191 >UniRef50_B6WWH1 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WWH1_9DELT Length = 206 Score = 79.3 bits (194), Expect = 8e-14, Method: Composition-based stats. Identities = 35/170 (20%), Positives = 63/170 (37%) Query: 40 VLVSIFATLSCLFAAEQLLIWSASAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMA 99 ++ + L L + + + + K L+P ++ R I + K G + Sbjct: 31 LVTAQGILLGGLLLMHDHALLAVAVLLIKGGLLPWLLHRTRRQIGADPHIKPRLGFGLAV 90 Query: 100 LLAALIVLLCAFVVQPVKLPMATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLME 159 L ++ ++ + + L L GLL +V + L Q+ GY + E Sbjct: 91 LTGLACLVFSLWLEGRLPMTPGLFPPLLLPAGLTTLFCGLLLVVGRATALSQVMGYLVAE 150 Query: 160 NGSHLVLALLAWRAPELVEIGIATDAIFAVIVMVLLARKIWRTHGTLDVN 209 NG L+ L E+ + D AV VM + I T ++DV Sbjct: 151 NGIFLLGIPLMTAGAVWFELTLLLDIFVAVFVMGIAINHISHTFESIDVG 200 >UniRef50_A6Q6W2 Ni-Fe hydrogenase, membrane subunit HyfE n=3 Tax=Epsilonproteobacteria RepID=A6Q6W2_SULNB Length = 197 Score = 74.2 bits (181), Expect = 3e-12, Method: Composition-based stats. Identities = 40/193 (20%), Positives = 81/193 (41%), Gaps = 1/193 (0%) Query: 6 IVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASAF 65 +V+ L GL + + + + +Y+ SL+L + + + +LI + Sbjct: 1 MVDFLIGLFLASLITALFATRLYRLLLWYSLNSLMLGLLALFIGKELDDKAMLITGVATI 60 Query: 66 ITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGLK 125 + K + +P ++ +L I++ ++ P+ M+ Sbjct: 61 LIKAVGIPYFFKNMSQKFHFVRQITPEIKVQYAIMLIPAILVFTFYLADPITHMMSGNA- 119 Query: 126 PALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATDA 185 +A+++ L LL ++ RN+ +I G+ MEN L+ P LVE+GI D Sbjct: 120 NYVAISISSLFLSLLLMMEHRNVAPKIIGFLSMENALFLLGITATDGMPMLVELGIFFDL 179 Query: 186 IFAVIVMVLLARK 198 + A++V+ LL K Sbjct: 180 LMAIVVINLLFHK 192 >UniRef50_B0SCU9 Formate hydrogenase, subunit E n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SCU9_LEPBA Length = 203 Score = 73.9 bits (180), Expect = 4e-12, Method: Composition-based stats. Identities = 50/192 (26%), Positives = 80/192 (41%), Gaps = 3/192 (1%) Query: 5 MIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASA 64 MI + + L++LT + ++ F + Q L+L IF + Q I Sbjct: 1 MIYDFIYLLLLLTGIVILVENRLSRIILFLSFQGLLL--IFPVIQTHEGDWQHAISLIVL 58 Query: 65 FIT-KVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATG 123 + K LL P I+ + A N FG L L ++L + + V L Sbjct: 59 VVLFKALLTPWILNWTANKSKMNESTTPRFGYLATLLFMVLGLVLAVKITEGVSLLSIPV 118 Query: 124 LKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIAT 183 K L + +G+LC V +RN L I G+C+ ENG ++ +L P +E G Sbjct: 119 HKIGLIYVILLVYVGILCFVVRRNWLALIAGFCVFENGIFVLTMVLDKGLPFGLEFGSFL 178 Query: 184 DAIFAVIVMVLL 195 DAI ++ +L Sbjct: 179 DAILVIVSGGIL 190 >UniRef50_A6UVJ8 Putative uncharacterized protein n=1 Tax=Methanococcus aeolicus Nankai-3 RepID=A6UVJ8_META3 Length = 210 Score = 73.5 bits (179), Expect = 5e-12, Method: Composition-based stats. Identities = 33/197 (16%), Positives = 74/197 (37%), Gaps = 2/197 (1%) Query: 14 MMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASAFITKVLLVP 73 ++ T L ++ A QS ++ + + LI + S + + +P Sbjct: 15 IIGTVLLTLNTHRLFSLVKTIAVQSFLVSVLTIIIGGGEITTYGLIIALSTLVIRSFFIP 74 Query: 74 LIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGLKPALAVALG 133 + YA R L G +++ + + L K + Sbjct: 75 SFLMYATRKGNIKRELNPLIGYQTSLFFGLIVIGIASIWSG--YLNFDISEKLLFIGGMT 132 Query: 134 HFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATDAIFAVIVMV 193 + L +++++ + Q+ Y ++ENG +V ++ +VE GI D + V++M Sbjct: 133 TIIPALFLLMARKKAITQVSSYLMLENGISIVGLMIGKNMQYVVEFGILLDILICVMLMT 192 Query: 194 LLARKIWRTHGTLDVNN 210 ++ +I + + T D Sbjct: 193 IIINQINKLYTTEDYKK 209 >UniRef50_B5YKQ7 Putative uncharacterized protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKQ7_THEYD Length = 214 Score = 73.1 bits (178), Expect = 6e-12, Method: Composition-based stats. Identities = 33/197 (16%), Positives = 82/197 (41%), Gaps = 1/197 (0%) Query: 7 VNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASAFI 66 + + ++ + K+ + S SL +V T+ + L + + Sbjct: 1 MEIIYIAILFFTFLTGEAKNLKFSVLSLVPHSLFIVIAVFTIGYINEISSLYLIGILDLV 60 Query: 67 TKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGLKP 126 + +L+P+++ +N I K + L+ +++ + V+ K + Sbjct: 61 VRAILMPILLLKCLKN-RLEIETKPSISHPLSIALSIVVLSVGYHFVEIFKSFYLPYVIS 119 Query: 127 ALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATDAI 186 + + L F+ G +S+R+I++ I + ++ENG H ++ + P+ +EI + + I Sbjct: 120 SFSCGLTLFIYGFCLFMSKRDIVKMIISFFIIENGIHFLIISMIPHMPKFIEISLTFNFI 179 Query: 187 FAVIVMVLLARKIWRTH 203 A++ V L ++ Sbjct: 180 IAILFFVYLIIRLNEVF 196 >UniRef50_C6PUG5 Hydrogenase, membrane subunit 2-like protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PUG5_9CLOT Length = 203 Score = 70.8 bits (172), Expect = 3e-11, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 87/210 (41%), Gaps = 8/210 (3%) Query: 6 IVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASAF 65 ++ L +++L+ + + ++ +L +A QSL + I L I Sbjct: 1 MLQLLLAIVILSGILICGLRRVKLLVLSFAFQSLAITFICIILGYNTKEIHYYIMGLLTL 60 Query: 66 ITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGLK 125 I KV+++P I+ + R + + +L+ +++ + Sbjct: 61 IIKVIIIPYIINKSTRYLKVKRELDLIINAVNSFVLSGFFIIIVCAFFRNYD-------N 113 Query: 126 PALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATDA 185 L A+ L+G ++ ++ + Q+ G+ +ENG L + ++E +A + Sbjct: 114 TYLKTAVFLALVGGTLMIGRKKAITQMIGFLTIENGIILFEMSVVK-LSLILEAWMALEV 172 Query: 186 IFAVIVMVLLARKIWRTHGTLDVNNLTALK 215 + ++M ++ I +T T++ + L+ LK Sbjct: 173 LVLALLMGIMIFNINKTFDTINTDYLSNLK 202 >UniRef50_Q2FKS7 Putative uncharacterized protein n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FKS7_METHJ Length = 230 Score = 63.8 bits (154), Expect = 4e-09, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 83/197 (42%), Gaps = 5/197 (2%) Query: 12 GLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASAFITKVLL 71 L++++ F++S +S + Y QS +LV I L L LL+ +A ++KV Sbjct: 16 ILVLVSGGFLLSSRSLKNLVRTYQFQSFLLVLIALGLVVLEEHTILLLVAALTVVSKVWG 75 Query: 72 VPLIMTYAARNIPQNIPEKALF----GPAMMALLAALIVLLCAFVVQPVKLPMATGLKPA 127 +P + I K + G M+++L L+V +C + ++ Sbjct: 76 IPACIRLIQERIHIQQDLKFSYLRPPGALMLSILIILLVYVCFAQILESLYAASSLFFLG 135 Query: 128 LAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATDAIF 187 + + L+GLL + +R + ++ GY MENG + P +E I D I Sbjct: 136 SVIGVSLVLMGLLAVCIRRMAISKVIGYLSMENGVLAFGLFVTE-LPFFIEFVIVIDLII 194 Query: 188 AVIVMVLLARKIWRTHG 204 V++ ++ I + Sbjct: 195 LVLLTSIMTVGIDSSIE 211 >UniRef50_A4YGN8 Hydrogenase 4 membrane component (E)-like protein n=1 Tax=Metallosphaera sedula DSM 5348 RepID=A4YGN8_METS5 Length = 209 Score = 63.1 bits (152), Expect = 6e-09, Method: Composition-based stats. Identities = 34/192 (17%), Positives = 75/192 (39%), Gaps = 3/192 (1%) Query: 5 MIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASA 64 I+ L+ L+ +T+L++ + + QSL++ +I + +I + Sbjct: 7 EIILLLSFLLPVTALYIQGQAYFNPAIKVVGVQSLIIGTISLVYYLFTDNIEFIILAGII 66 Query: 65 FITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGL 124 F T+V L P I+ + + + + ++ L V V Sbjct: 67 FFTRVFLTPYILLRTVKYREWDREKVKVLSSFVLNL--TFFFSATLLVAYAVFTRAIPTE 124 Query: 125 KPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATD 184 + + + F GL I S+++ + I GY +EN ++ L P L++ + D Sbjct: 125 YEQVIMPMTLFFQGLFLIASRKSTVAHILGYIELENSLVMLGIFLIPP-PILIDATVFLD 183 Query: 185 AIFAVIVMVLLA 196 + V++ ++ Sbjct: 184 VLALVVISSIII 195 >UniRef50_Q3Z679 Hydrogenase subunit, putative n=5 Tax=Dehalococcoides RepID=Q3Z679_DEHE1 Length = 226 Score = 60.8 bits (146), Expect = 3e-08, Method: Composition-based stats. Identities = 40/184 (21%), Positives = 79/184 (42%), Gaps = 4/184 (2%) Query: 24 VKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASAFITKVLLVPLIMTYAARNI 83 +S YA QSL++ + + LL + KV L+P I+ + Sbjct: 28 QRSLTSLFKTYALQSLLVALVALAFFIHDSHLTLLFIALLTLFGKVFLIPRILNRILFQM 87 Query: 84 PQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGLK---PALAVALGHFLLGLL 140 + F + +L+ +++++ + V L + + + L+G++ Sbjct: 88 NIRRDLEFRFLYPVSSLIVSILLVFGVYQVFSSLLGEVMPERLFTLGAVIGVSMALMGMM 147 Query: 141 CIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATDAIFAVIVMVLLARKIW 200 I S++ +L +I GY MENG+ L +A P ++EI + D + V+++ +LA I Sbjct: 148 VIFSRKKMLTKIVGYLSMENGAILFGLFVAE-LPFILEILVLIDLVILVLLLTVLAFGID 206 Query: 201 RTHG 204 T Sbjct: 207 STIE 210 >UniRef50_B5I9E5 Hydrogenase 4 membrane component (E)-like protein n=2 Tax=Aciduliprofundum boonei T469 RepID=B5I9E5_9EURY Length = 208 Score = 59.2 bits (142), Expect = 8e-08, Method: Composition-based stats. Identities = 41/189 (21%), Positives = 81/189 (42%), Gaps = 4/189 (2%) Query: 7 VNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASAFI 66 ++ L L++L +I+ Q+++L + + +L+ + I Sbjct: 8 IDFLGVLILLYGFVIIAENYIHSVIRHLQAQTIILSLLIGIVGFYLRMWELIALAIFTLI 67 Query: 67 TKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGLKP 126 + L+P I+ + + + A +L+A +I + + V + K Sbjct: 68 FRAWLIPNILLKDIKK-ERVWEHREFGAKAKSSLIAGIITAIVGIIAYLVIYNVIGTWKG 126 Query: 127 ALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATDAI 186 + L F L ++ + +RN L QI GY + EN L L ++ + L+E+GI D I Sbjct: 127 MIPFILLLFGLLIIVM--RRNALAQISGYIVEENAL-LYLGIVFYPIGFLLEVGILLDVI 183 Query: 187 FAVIVMVLL 195 AV++ V+L Sbjct: 184 GAVLLAVIL 192 >UniRef50_C3NHY0 Putative uncharacterized protein n=9 Tax=Sulfolobus RepID=C3NHY0_SULIN Length = 213 Score = 58.4 bits (140), Expect = 2e-07, Method: Composition-based stats. Identities = 36/199 (18%), Positives = 83/199 (41%), Gaps = 5/199 (2%) Query: 1 MTGSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIW 60 M S I+ L+ +++++ ++ ++ + A QS ++ + L + +I Sbjct: 1 MINSEILELLSTFILISAFYIQGQAYFKPAIYAQAIQSTLIAILAFHLGISLFSIDYIIL 60 Query: 61 SASAFITKVLLVPLIMTY-AARNIPQNIPEKALFGPAMMALLAALIV---LLCAFVVQPV 116 + + + +L+ + + + P ++ LA I+ ++ FV++ + Sbjct: 61 GITVILLRTVLITIFLFRGLVKEKPGTRESSKGVASELVLNLAFSIIASLVVYYFVLEKI 120 Query: 117 KLPMATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPEL 176 + L A GL I+S+++ + Q G+ EN + L LL P L Sbjct: 121 PISTEINNTLMLLFAFILLFQGLFLIISRKSTIFQFIGFIEEENSTILFGILLLP-IPFL 179 Query: 177 VEIGIATDAIFAVIVMVLL 195 +E+ + D + VI+ +L Sbjct: 180 IEVSVFLDVLGLVIISSIL 198 >UniRef50_Q04P28 Formate hydrogenase, subunit E n=4 Tax=Leptospira RepID=Q04P28_LEPBJ Length = 206 Score = 54.6 bits (130), Expect = 2e-06, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 59/162 (36%), Gaps = 2/162 (1%) Query: 26 SYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASAFITKVLLVPLIMTYAARNIPQ 85 + A QS+ L + L + + KV+L P I+ + AR Sbjct: 22 RLKRLVLLLAFQSVFL--LVPLFEDGGYGTHSLFLAGMIILFKVILTPWILYWTARRTNS 79 Query: 86 NIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGLKPALAVALGHFLLGLLCIVSQ 145 G L + ++ F++ K + + +G++ V + Sbjct: 80 VESTFPKVGYIPTFALLMVGAVVGFFILGFTKFRFGEVNQMSFLYTFLLLYVGMVGFVVR 139 Query: 146 RNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATDAIF 187 R+ + I + + ENG+ L+ +L P +E G DA+F Sbjct: 140 RHWVGVIASFAVFENGTFLLTQILRTELPLGIEFGSFLDAVF 181 >UniRef50_Q978D8 Putative uncharacterized protein TVG1530142 n=2 Tax=Thermoplasmatales RepID=Q978D8_THEVO Length = 217 Score = 50.4 bits (119), Expect = 4e-05, Method: Composition-based stats. Identities = 30/198 (15%), Positives = 66/198 (33%), Gaps = 8/198 (4%) Query: 6 IVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASAF 65 +V ++ L+ +++ ++ + + QS+++ + + + I Sbjct: 7 VVYLISSLIAISAFYIQGQEFIASMIRGQSVQSVLIAVVAFIIGWQERSYDFFILGILII 66 Query: 66 ITKVLLVPLIMTYAARNIPQNIPEK-------ALFGPAMMALLAALIVLLCAFVVQPVKL 118 I + LV + + E+ L + + +I + + Sbjct: 67 ILRAFLVNYFLQKRIPKQKVYLYERKVSLSYLFLLDLIFIVISVFIIYSIAFSGIVLHSF 126 Query: 119 PMATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVE 178 G L L F GL I S+R + GY EN L L P ++E Sbjct: 127 LGNGGNSSVLVFPLTLFFQGLFLIASRRTTFTHVIGYVEEENSLVLFAMFLLP-IPIIIE 185 Query: 179 IGIATDAIFAVIVMVLLA 196 + D + V++ ++ Sbjct: 186 ASVFLDVLALVVISSIVV 203 >UniRef50_A9FF75 Hypothetical transmembrane protein, probably involved in the FHL pathway n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FF75_SORC5 Length = 210 Score = 47.7 bits (112), Expect = 3e-04, Method: Composition-based stats. Identities = 26/144 (18%), Positives = 49/144 (34%), Gaps = 1/144 (0%) Query: 28 RLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASAFITKVLLVPLIMTYAARNIPQNI 87 R S +CQ ++ + L+ + + + L P+ + R+ Sbjct: 22 RTSLAGLSCQGFLMAWVAYRLNPDLGTVGDWVTLGDLVLLRGLAAPIALYRVLRSQNAPR 81 Query: 88 PEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGLKPALAVALGHFLLGLLCIVSQRN 147 + + +A +VLL + + + +AVA LLG L + +Q Sbjct: 82 RNDVISPNLLSWTIALGVVLLAFNFSESLVPEHG-ERRTLVAVAAAGVLLGFLVLSTQSG 140 Query: 148 ILRQIFGYCLMENGSHLVLALLAW 171 Q+ G +EN L A Sbjct: 141 PFSQMVGVLRIENAIALFELSGAH 164 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q0W2B7 Hydrogenase, membrane subunit 2-like protein n=1... 164 2e-39 UniRef50_Q12F18 Hydrogenase 4 membrane component n=30 Tax=Bacter... 157 3e-37 UniRef50_Q1PZL6 Similar to membrane-bound [NiFe]-hydrogenase-4, ... 155 1e-36 UniRef50_Q609T7 Hydrogenase subunit n=1 Tax=Methylococcus capsul... 151 1e-35 UniRef50_B1ZSF0 Hydrogenase 4 membrane component (E) n=1 Tax=Opi... 151 1e-35 UniRef50_Q5P2G8 Hydrogenase 4 membrane component n=2 Tax=Betapro... 149 5e-35 UniRef50_B7R8R0 NADH-ubiquinone/plastoquinone oxidoreductase cha... 148 1e-34 UniRef50_C0QBF5 HyfE n=1 Tax=Desulfobacterium autotrophicum HRM2... 148 2e-34 UniRef50_B8I2P7 Hydrogenase, membrane subunit 2-like protein n=2... 146 5e-34 UniRef50_P0AEW2 Hydrogenase-4 component E n=70 Tax=Bacteria RepI... 143 5e-33 UniRef50_B4UA29 Hydrogenase 4 membrane component (E) n=2 Tax=Aqu... 142 7e-33 UniRef50_C7HZ66 Hydrogenase 4 membrane component (E)-like protei... 142 9e-33 UniRef50_C7LSU7 NAD-dependent dehydrogenase subunit n=2 Tax=Bact... 141 2e-32 UniRef50_A7HGW6 NAD-dependent dehydrogenase subunit n=5 Tax=Bact... 139 6e-32 UniRef50_C8W238 Hydrogenase 4, membrane component n=1 Tax=Desulf... 139 6e-32 UniRef50_Q20XP2 NADH-ubiquinone oxidoreductase, chain 4L n=4 Tax... 137 2e-31 UniRef50_C4XJS8 Putative hydrogenase-4 component E n=1 Tax=Desul... 137 3e-31 UniRef50_A5GBF7 Hydrogenase 4 membrane component (E)-like protei... 136 4e-31 UniRef50_B5EKJ5 Hydrogenase 4 membrane component n=4 Tax=Bacteri... 136 6e-31 UniRef50_A1RWL6 NADH-ubiquinone oxidoreductase, chain 4L n=1 Tax... 133 4e-30 UniRef50_C5V247 Hydrogenase 4 membrane component n=4 Tax=Proteob... 130 3e-29 UniRef50_Q24ST6 Hydrogenase-4 component E n=2 Tax=Desulfitobacte... 130 4e-29 UniRef50_P64681 Uncharacterized protein Rv0085/MT0092 n=17 Tax=A... 130 4e-29 UniRef50_Q2RXM1 NADH-ubiquinone oxidoreductase, chain 4L n=1 Tax... 129 5e-29 UniRef50_D2L9G8 NAD-dependent dehydrogenase subunit n=1 Tax=Desu... 129 6e-29 UniRef50_A7GWM9 Hydrogenase-4 component E n=8 Tax=Epsilonproteob... 129 6e-29 UniRef50_A5FYC6 Hydrogenase 4 membrane component (E)-like protei... 128 1e-28 UniRef50_Q6APF0 Hypothetical membrane protein n=1 Tax=Desulfotal... 125 1e-27 UniRef50_C1XWY5 Hydrogenase 4 membrane component (E) n=1 Tax=Mei... 121 2e-26 UniRef50_A0LSU3 Hydrogenase subunit n=1 Tax=Acidothermus cellulo... 120 4e-26 UniRef50_B8IYV7 NAD-dependent dehydrogenase subunit n=1 Tax=Desu... 118 1e-25 UniRef50_A6UVJ8 Putative uncharacterized protein n=1 Tax=Methano... 117 3e-25 UniRef50_B6WWH1 Putative uncharacterized protein n=1 Tax=Desulfo... 112 9e-24 UniRef50_C8XAS1 Putative uncharacterized protein n=2 Tax=Actinom... 110 4e-23 UniRef50_D0L1P2 Hydrogenase 4 membrane component (E) n=3 Tax=Pro... 109 6e-23 UniRef50_A7I7D2 Hydrogenase-4 component E n=3 Tax=Methanomicrobi... 108 1e-22 UniRef50_B0SCU9 Formate hydrogenase, subunit E n=2 Tax=Leptospir... 106 6e-22 UniRef50_A6Q6W2 Ni-Fe hydrogenase, membrane subunit HyfE n=3 Tax... 103 4e-21 UniRef50_C6PUG5 Hydrogenase, membrane subunit 2-like protein n=1... 102 1e-20 UniRef50_B5YKQ7 Putative uncharacterized protein n=1 Tax=Thermod... 101 1e-20 UniRef50_A4YGN8 Hydrogenase 4 membrane component (E)-like protei... 98 2e-19 UniRef50_Q978D8 Putative uncharacterized protein TVG1530142 n=2 ... 96 1e-18 UniRef50_Q2FKS7 Putative uncharacterized protein n=1 Tax=Methano... 95 2e-18 UniRef50_C3NHY0 Putative uncharacterized protein n=9 Tax=Sulfolo... 94 3e-18 UniRef50_Q04P28 Formate hydrogenase, subunit E n=4 Tax=Leptospir... 94 3e-18 UniRef50_Q3Z679 Hydrogenase subunit, putative n=5 Tax=Dehalococc... 93 5e-18 UniRef50_B5I9E5 Hydrogenase 4 membrane component (E)-like protei... 91 2e-17 UniRef50_A9FF75 Hypothetical transmembrane protein, probably inv... 81 2e-14 Sequences not found previously or not previously below threshold: UniRef50_Q6L0T9 Hypothetical membrane protein n=1 Tax=Picrophilu... 51 3e-05 UniRef50_Q21TB6 Putative uncharacterized protein n=1 Tax=Rhodofe... 49 1e-04 >UniRef50_Q0W2B7 Hydrogenase, membrane subunit 2-like protein n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W2B7_UNCMA Length = 220 Score = 164 bits (416), Expect = 2e-39, Method: Composition-based stats. Identities = 54/214 (25%), Positives = 103/214 (48%) Query: 3 GSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSA 62 G+ I+N LA ++ LT+ +++ A QSL L + A ++ + + + +A Sbjct: 7 GNNIINGLAVVIFLTTFLIVAHTRLYPWVRTLAIQSLALGLLGAAVAYFTGSPHIYLVAA 66 Query: 63 SAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMAT 122 I K ++P + Y I + + + L+A + +L F+ +P+ + Sbjct: 67 LTIIIKAFIIPRFIEYTMNRINVDREVEMMLNVPASLLVAGGLAILSYFITEPIIAQGSA 126 Query: 123 GLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIA 182 K LA+++ L+G ++S+R + QI G +MENG L ++ P +VEIG+ Sbjct: 127 ITKNCLAISIAVVLIGFFIMISRRKAITQIMGLMVMENGLFLAAISTSYGMPLIVEIGVF 186 Query: 183 TDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 D + V++M + A +I +T T+D L L+ Sbjct: 187 FDILVGVLIMGIFAFQINKTFDTIDTGILRRLRD 220 >UniRef50_Q12F18 Hydrogenase 4 membrane component n=30 Tax=Bacteria RepID=Q12F18_POLSJ Length = 219 Score = 157 bits (397), Expect = 3e-37, Method: Composition-based stats. Identities = 45/213 (21%), Positives = 92/213 (43%) Query: 4 SMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSAS 63 + VN L ++++ + +I+ + + Q LV + + L I + Sbjct: 6 TQFVNLLGAVLLMLAFAMIAQRRILSLIHLFTMQGATLVLATGVVGYVTNQPHLYISAGV 65 Query: 64 AFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATG 123 F+ KVLL+P ++ + + L L+ ++V+ + P+ + Sbjct: 66 TFVLKVLLIPYLLHRVIDRLNIRWDVETLINIPTTMLIGIVVVIFAFDLAMPIARLSSAL 125 Query: 124 LKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIAT 183 L +AL LL L ++++ + Q+ G+ MENG + P +VE+GIA Sbjct: 126 ASGTLGIALACVLLSFLMMITRAKAVPQVIGFLAMENGLFFAATSATYGMPMVVELGIAL 185 Query: 184 DAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 D + V+++ + +I +LD+++L LK Sbjct: 186 DVLIGVLILGVFMFQIREQFDSLDISHLEKLKD 218 >UniRef50_Q1PZL6 Similar to membrane-bound [NiFe]-hydrogenase-4, subunit E n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZL6_9BACT Length = 221 Score = 155 bits (392), Expect = 1e-36, Method: Composition-based stats. Identities = 45/215 (20%), Positives = 99/215 (46%) Query: 1 MTGSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIW 60 + S I++ LA LM++T++ +I + A +S +L ++ L + I Sbjct: 6 IVNSQIIDVLAVLMLMTTIILIGTSRLKTCIWASAIRSFLLTLTSGLIAYLSGIHHIYIT 65 Query: 61 SASAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPM 120 + + + KV ++P + Y + ++ + L++ I+L+ + P+ Sbjct: 66 TGISLVLKVFVIPGFLFYIVDKVRIKKEVESYISYTLSLLISCGIILIAYYATLPIIQFE 125 Query: 121 ATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIG 180 ++ L V+L LLG +++++ + QI G ME+G ++ P +VE+G Sbjct: 126 NVFMRHCLPVSLAITLLGFFAMITRKKAITQILGLITMEDGLFFAALSTSYGMPLIVELG 185 Query: 181 IATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALK 215 + D + +VI+M + +I + ++DV L+ Sbjct: 186 VFFDILVSVIIMGVYVYRIKESFDSIDVGFFRELR 220 >UniRef50_Q609T7 Hydrogenase subunit n=1 Tax=Methylococcus capsulatus RepID=Q609T7_METCA Length = 225 Score = 151 bits (383), Expect = 1e-35, Method: Composition-based stats. Identities = 49/210 (23%), Positives = 98/210 (46%) Query: 5 MIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASA 64 + +A L++ TS ++ K +A Q +L + A + L I + Sbjct: 11 QAILFIAALVVFTSFLMLGQKRLSGMIHLFAAQGALLAATTALAAYALPYPHLYISALII 70 Query: 65 FITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGL 124 KV+L+P ++ + + + L+ + + AA +V+ +VV+P++ Sbjct: 71 MALKVILIPAMLHRLIVRLDMHRDAEPLYLYGYVMMAAAALVMFSYYVVEPIEHLSTLAT 130 Query: 125 KPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATD 184 + A+AV+L LLG+L ++++R ++ + G+ +ENG P +VE+GIA D Sbjct: 131 RNAMAVSLAVVLLGMLLMITRRQVVTHVIGFMAIENGLFFAAVASTQGMPMVVELGIAFD 190 Query: 185 AIFAVIVMVLLARKIWRTHGTLDVNNLTAL 214 + A ++ + I + +LDV+ L L Sbjct: 191 VLVAAVIFGVFFFHIRSSIDSLDVDRLNRL 220 >UniRef50_B1ZSF0 Hydrogenase 4 membrane component (E) n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZSF0_OPITP Length = 222 Score = 151 bits (383), Expect = 1e-35, Method: Composition-based stats. Identities = 55/215 (25%), Positives = 98/215 (45%), Gaps = 2/215 (0%) Query: 2 TGSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWS 61 T S ++ A +M++ L ++ + + +A QSL+L +I A + + A + + + Sbjct: 8 TSSQLITLFASVMLVLQLLIVVQRMLITNIRLFAMQSLLLAAIAAVVGYTYGAWHVYVVA 67 Query: 62 ASAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMA 121 + KVL +P + R + + L+ + +L V +P Sbjct: 68 VLTLLGKVLFLPWWLHRLVRQMKVEQEVQPFVNMPASMLICGALTVLACVVARPFTSLER 127 Query: 122 TGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALL-AWRAPELVEIG 180 G LAVAL L G ++++R + Q+ MENG L L + P +VEIG Sbjct: 128 LG-SNTLAVALALLLTGFFLMINRRKAITQVLALLTMENGMMLAAIALTTYGMPFVVEIG 186 Query: 181 IATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALK 215 I D + AV+V+ +L +I + ++DV+ L LK Sbjct: 187 IFFDVVVAVMVLGILVFRIRESFASMDVSKLNKLK 221 >UniRef50_Q5P2G8 Hydrogenase 4 membrane component n=2 Tax=Betaproteobacteria RepID=Q5P2G8_AZOSE Length = 219 Score = 149 bits (378), Expect = 5e-35, Method: Composition-based stats. Identities = 44/212 (20%), Positives = 93/212 (43%) Query: 4 SMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSAS 63 + +N A ++++ + +I+ + + Q L + + L L +A Sbjct: 6 AQSINLFAVVLLVLAFAMIAQRRILTLIHLFTLQGAALAAATLIVGFLTGQHHLYYSAAM 65 Query: 64 AFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATG 123 F+ KV+L+P+++ + + LF L+ ++V+ + P+ A+ Sbjct: 66 TFVLKVILIPILLHRVIERLNVRWDVETLFNIPTTMLIGIVLVIFAFNLAAPIAGLSASI 125 Query: 124 LKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIAT 183 + L +AL LL L ++ + + Q+ G+ MENG P +VE+GIA Sbjct: 126 ARGTLGIALACVLLSFLMMIVRAKAVPQVIGFLSMENGLFFAATAATSGMPMIVELGIAF 185 Query: 184 DAIFAVIVMVLLARKIWRTHGTLDVNNLTALK 215 D + ++++ + +I +LD+ +L LK Sbjct: 186 DVLVGILILGVFMFQIREQFDSLDIRHLEKLK 217 >UniRef50_B7R8R0 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L family protein n=4 Tax=Firmicutes RepID=B7R8R0_9THEO Length = 238 Score = 148 bits (374), Expect = 1e-34, Method: Composition-based stats. Identities = 98/216 (45%), Positives = 144/216 (66%), Gaps = 1/216 (0%) Query: 1 MTGSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIW 60 M+G+ IVN L+ L++LTS+ V+ + R++ Y QSLVLV+IF +++ A+ L IW Sbjct: 24 MSGTNIVNVLSVLLILTSMLVVETRKLRMAAYMYRFQSLVLVTIFLSIAVFMEAKPLYIW 83 Query: 61 SASAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPM 120 S +A ITK LVP ++ + E + +LA I+ L VV+P + Sbjct: 84 SITALITKTFLVPYLILKVIERVK-EQEEGVAIDRKLTIILAVGILALSFAVVEPFHMQA 142 Query: 121 ATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIG 180 L+ ALAV++ HF+LGLLCI++++N L+QI GYCLMENGSHL LA++A+ APE VEIG Sbjct: 143 VLKLRVALAVSIAHFMLGLLCILARKNALKQILGYCLMENGSHLTLAIMAYNAPETVEIG 202 Query: 181 IATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 I TDA+FAV++M ++AR++++ GTLD + LT LKG Sbjct: 203 ILTDAVFAVLIMTIIARRLFKDFGTLDTDKLTLLKG 238 >UniRef50_C0QBF5 HyfE n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QBF5_DESAH Length = 215 Score = 148 bits (373), Expect = 2e-34, Method: Composition-based stats. Identities = 41/214 (19%), Positives = 88/214 (41%) Query: 3 GSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSA 62 + N L L++L + ++S Q+++L + +L+I Sbjct: 1 MTSTFNFLVILLILLNFRLLSSSRLTPCIHILMMQAVILTCVTWLTHQSNMDIRLMILLG 60 Query: 63 SAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMAT 122 K + +P +++ A + + G ++ A ++ + +P+ L Sbjct: 61 VNIALKAIAMPWMLSRVAHKTAISRELDPIVGYTASLIIGAFLLGFSVLISRPLYLSHTV 120 Query: 123 GLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIA 182 L V+L GL ++++ + Q+ GY +MENG + +A + P +VE+ + Sbjct: 121 VETLFLPVSLFTMFSGLFMTIARKKAITQVLGYMVMENGIYTFGMAMAIQEPFIVELSVL 180 Query: 183 TDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 D AV++M + I R +D + L+ L+ Sbjct: 181 LDVFVAVLIMGVAIFHISREFDHMDTDRLSVLRD 214 >UniRef50_B8I2P7 Hydrogenase, membrane subunit 2-like protein n=2 Tax=Clostridium RepID=B8I2P7_CLOCE Length = 220 Score = 146 bits (369), Expect = 5e-34, Method: Composition-based stats. Identities = 52/218 (23%), Positives = 105/218 (48%), Gaps = 5/218 (2%) Query: 4 SMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLF-----AAEQLL 58 + ++N LA L++++S +++ K + QS++L I +S +++ Sbjct: 3 NNVLNLLAILILISSFTLVANKRQNAYITTFRMQSVLLALISLIVSVKSMVESKKFDEVF 62 Query: 59 IWSASAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKL 118 + KV L+P++M + + + + + L+ +V+LC +VV ++ Sbjct: 63 FIFLLIVVFKVFLIPMVMRRTSNRVEYKVEKDFFINIPISMLICCGLVVLCWYVVFNIEG 122 Query: 119 PMATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVE 178 + L +L ++GL ++S++ L QI G+ ++ENG L L P +VE Sbjct: 123 ITNPATENYLIYSLSVVMIGLFFMISRKKALGQIIGFLVIENGLFLSAMLTTGGMPMIVE 182 Query: 179 IGIATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 +G+ D + A ++M + KI T ++D+N L LKG Sbjct: 183 LGLFFDLLTAFLIMGIFVFKINNTFNSIDINKLKQLKG 220 >UniRef50_P0AEW2 Hydrogenase-4 component E n=70 Tax=Bacteria RepID=HYFE_ECO57 Length = 216 Score = 143 bits (361), Expect = 5e-33, Method: Composition-based stats. Identities = 216/216 (100%), Positives = 216/216 (100%) Query: 1 MTGSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIW 60 MTGSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIW Sbjct: 1 MTGSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIW 60 Query: 61 SASAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPM 120 SASAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPM Sbjct: 61 SASAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPM 120 Query: 121 ATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIG 180 ATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIG Sbjct: 121 ATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIG 180 Query: 181 IATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 IATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG Sbjct: 181 IATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 >UniRef50_B4UA29 Hydrogenase 4 membrane component (E) n=2 Tax=Aquificales RepID=B4UA29_HYDS0 Length = 222 Score = 142 bits (359), Expect = 7e-33, Method: Composition-based stats. Identities = 44/217 (20%), Positives = 88/217 (40%), Gaps = 2/217 (0%) Query: 1 MTGSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIW 60 ++ S V +A L + ++ + + Y QS+ L + +L++ Sbjct: 5 ISLSEFVEFMAALSLFFAILQTASHRLDFAIKTYTAQSIALSITMFLSVFYYFDYELILS 64 Query: 61 SASAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKL-- 118 + + K +L+P +M I ++ K L+ IV+ ++ Sbjct: 65 AVLTLLIKGILIPFVMKKITDKIVEDENVKPFINFTYSVLICIFIVIFSFYITSNTFYHS 124 Query: 119 PMATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVE 178 ++ LA+ L +G+ +++++ L QI G+ +ENG L P +VE Sbjct: 125 TDNGTMQKVLAIGLSIIFVGIFLMLARKKALIQIIGFLTLENGIILGATSTVKGLPLIVE 184 Query: 179 IGIATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALK 215 IG+ D I+ +L I T ++D + L+ LK Sbjct: 185 IGVFFDVFVGAIMAGILIFHIKDTLESIDTSKLSDLK 221 >UniRef50_C7HZ66 Hydrogenase 4 membrane component (E)-like protein n=1 Tax=Thiomonas intermedia K12 RepID=C7HZ66_THIIN Length = 273 Score = 142 bits (358), Expect = 9e-33, Method: Composition-based stats. Identities = 46/213 (21%), Positives = 99/213 (46%) Query: 3 GSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSA 62 + +++ +A L++L S +++ + +A Q +LV+ ++ +L +A Sbjct: 59 STQLIHLIAALLLLLSFAMLAQRRVVNLVNLFAAQGALLVASTVVVAYSTGDAELYQSAA 118 Query: 63 SAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMAT 122 + KV+++PL++ R + + L + L+ ++V+ + QP+ Sbjct: 119 LTLLLKVIVLPLVLHKLIRRLHAEWDTETLVNIPTLQLIGIVLVIFSFVLAQPISRFAGE 178 Query: 123 GLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIA 182 ++ L +AL LL L ++ +R + Q+ G+ MENG P +VE+GI Sbjct: 179 AMRGTLGIALALVLLAFLMMIVRRKAVAQVVGFLAMENGLLFAATSATQGMPMVVELGIG 238 Query: 183 TDAIFAVIVMVLLARKIWRTHGTLDVNNLTALK 215 D + V ++ + +I +LD+ N+ +LK Sbjct: 239 LDVLVGVFILGIFFFQIREQFDSLDLQNMESLK 271 >UniRef50_C7LSU7 NAD-dependent dehydrogenase subunit n=2 Tax=Bacteria RepID=C7LSU7_DESBD Length = 214 Score = 141 bits (355), Expect = 2e-32, Method: Composition-based stats. Identities = 49/213 (23%), Positives = 88/213 (41%) Query: 3 GSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSA 62 + +N L GL M +L + + A Q ++L + L +L++ + Sbjct: 1 MNDTLNLLIGLAMGFNLLALGTSRLPVLIRAVAIQGVLLGLLPLVLEAHALDWRLVLITL 60 Query: 63 SAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMAT 122 + K +L+P ++ A R + G LL A + + + + L Sbjct: 61 ATVAGKGVLIPFMLIRAMRAANIARELEPYIGYIPSLLLGAAGTIAAVALTRYLPLLPEH 120 Query: 123 GLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIA 182 + A+ L G + ++ + + Q+ GY ++ENG +L LL P LVE GI Sbjct: 121 AGNLHVPGAMALILTGFILLIGRTKAISQVCGYLILENGIYLAGLLLIRSTPILVEFGIL 180 Query: 183 TDAIFAVIVMVLLARKIWRTHGTLDVNNLTALK 215 D + V+ ++ +I R +LD LTAL Sbjct: 181 LDVTVGIFVIGIIVDRIQRAFDSLDTRKLTALH 213 >UniRef50_A7HGW6 NAD-dependent dehydrogenase subunit n=5 Tax=Bacteria RepID=A7HGW6_ANADF Length = 215 Score = 139 bits (351), Expect = 6e-32, Method: Composition-based stats. Identities = 51/215 (23%), Positives = 93/215 (43%), Gaps = 1/215 (0%) Query: 3 GSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFAT-LSCLFAAEQLLIWS 61 + V+ + L+++ LF+++ + A Q +L ++ + L+ + Sbjct: 1 MASFVDLVFILVVVIDLFLLASSRLGAAIRTVAIQGALLAALPLLLVGEGHHLGHALLLA 60 Query: 62 ASAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMA 121 A K +P +M A R + + G +L + V L + LP A Sbjct: 61 GGALAIKGAFIPWLMFRAIREASIRREMEPIVGFVPSMVLGGVGVALAFAFSSRLPLPSA 120 Query: 122 TGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGI 181 + AL GLL +V+++ + Q+ G+ ++ENG ++ LL+ P +VE G+ Sbjct: 121 GAHAFLVPTALSTVWAGLLLVVTRKKAVSQVLGFLVLENGVYVFGLLLSDVMPVMVEAGV 180 Query: 182 ATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 D AV VM ++ I R +LD L+ALK Sbjct: 181 LLDLFAAVFVMGIVMFHINREFSSLDTEKLSALKD 215 >UniRef50_C8W238 Hydrogenase 4, membrane component n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W238_DESAS Length = 214 Score = 139 bits (351), Expect = 6e-32, Method: Composition-based stats. Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 3/213 (1%) Query: 6 IVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAA--EQLLIWSAS 63 +V+ LA + +++ L +++ KS + A QSL L S+ + A + + Sbjct: 3 VVDFLAVVFLMSGLLMLAGKSIPNNINLLAVQSLALSSMAFYMGYNQGANGTHMFLVGGL 62 Query: 64 AFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATG 123 + KV+++P ++ ++ + G L+ L++ L PV L G Sbjct: 63 TLLIKVVILPWVLFKLVYSVKVDREASLSVGLIPSILIGILLIGLSYDYAVPVLLEELPG 122 Query: 124 LKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIAT 183 L+ AL LLG ++S+R + Q+ G +MENG L + P ++E+GI Sbjct: 123 G-HLLSAALSTVLLGCFFMISRRTAISQLIGIVVMENGLFLCAVAVTGGMPLIIELGIFF 181 Query: 184 DAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 D + +VM ++ +I T TLD L LKG Sbjct: 182 DVLVGALVMGIMTYQIRGTFDTLDTKYLNKLKG 214 >UniRef50_Q20XP2 NADH-ubiquinone oxidoreductase, chain 4L n=4 Tax=Bacteria RepID=Q20XP2_RHOPB Length = 217 Score = 137 bits (346), Expect = 2e-31, Method: Composition-based stats. Identities = 121/217 (55%), Positives = 152/217 (70%), Gaps = 1/217 (0%) Query: 1 MTGSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIW 60 M+G IVN LAGL+++TSL V+ + S FYA QSLVLV++F L A QL IW Sbjct: 1 MSGLQIVNGLAGLLIVTSLLVVVARKPSQSAKFYALQSLVLVAVFVALGSATNAPQLYIW 60 Query: 61 SASAFITKVLLVPLIMTYAARNIPQNI-PEKALFGPAMMALLAALIVLLCAFVVQPVKLP 119 +A AF+TKV+LVP+IM + + PA+ LLAA++VLLC ++ V LP Sbjct: 61 AAVAFVTKVVLVPVIMARSFGRLSDERLGTGERISPAVTVLLAAVVVLLCTLIISGVTLP 120 Query: 120 MATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEI 179 A G+KPALA++L HF GL CIV+QRNIL+Q+FGYCLMENGSHL LALLA APELVEI Sbjct: 121 AAAGIKPALAISLAHFFFGLACIVTQRNILKQVFGYCLMENGSHLTLALLAGSAPELVEI 180 Query: 180 GIATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 GI TDA+FAV++MV+LA +I R TLD + LT LKG Sbjct: 181 GITTDAVFAVVIMVILATQINRKLATLDADQLTTLKG 217 >UniRef50_C4XJS8 Putative hydrogenase-4 component E n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XJS8_DESMR Length = 211 Score = 137 bits (345), Expect = 3e-31, Method: Composition-based stats. Identities = 42/195 (21%), Positives = 76/195 (38%), Gaps = 2/195 (1%) Query: 22 ISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASAFITKVLLVPLIMTYAAR 81 ++V + A Q ++L + ++ L+ S + K + P ++ Sbjct: 19 LAVTRLKTLTRITALQGVLLAATPLAIAGPHG--HGLVLSLAVLAIKGIGFPWLVARTLS 76 Query: 82 NIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGLKPALAVALGHFLLGLLC 141 + N + FG M L +L ++ + P AL GL Sbjct: 77 RLEVNPVVEPYFGFNMSLLAGVGGLLFSLWLESRLPFPPGLFPPLLFPAALTSIFSGLTL 136 Query: 142 IVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATDAIFAVIVMVLLARKIWR 201 +V++R L Q+ GY ENG L+ LA + +E+ + D AV VM + I + Sbjct: 137 VVARRKALTQVIGYLAAENGIFLLGVPLAAQGSVWLELSVLLDVFVAVFVMGIALHHINK 196 Query: 202 THGTLDVNNLTALKG 216 T ++DV +L+ Sbjct: 197 TFESIDVGRFCSLRD 211 >UniRef50_A5GBF7 Hydrogenase 4 membrane component (E)-like protein n=10 Tax=Desulfuromonadales RepID=A5GBF7_GEOUR Length = 214 Score = 136 bits (344), Expect = 4e-31, Method: Composition-based stats. Identities = 46/215 (21%), Positives = 87/215 (40%), Gaps = 2/215 (0%) Query: 1 MTGSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIW 60 M + + L L+ML + V+ ++ A Q +VL + A + + L+ Sbjct: 1 MIMTEFADQLLVLVMLINFLVLGSSRMAIAIRAVAVQGVVLGVLPAII--HTFSWHLIAI 58 Query: 61 SASAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPM 120 + K L +P ++ A + + G ++ A+ L + L Sbjct: 59 IVGMILAKGLFIPWLLFGAMNKVQIKREVEPYIGYVSTLIIVAITTALAFVFAAKLPLAQ 118 Query: 121 ATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIG 180 + ++ + G L + ++R + Q+ GY ++ENG + LL P +VE G Sbjct: 119 EHQGLLFVPASIATIITGFLTLTTRRKAISQVIGYLILENGIFIFGLLLTSAMPVMVEAG 178 Query: 181 IATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALK 215 D + + VM ++ I T+D + LTALK Sbjct: 179 ALLDLLVGIFVMGIVINHISNEFSTIDTSRLTALK 213 >UniRef50_B5EKJ5 Hydrogenase 4 membrane component n=4 Tax=Bacteria RepID=B5EKJ5_ACIF5 Length = 225 Score = 136 bits (343), Expect = 6e-31, Method: Composition-based stats. Identities = 38/192 (19%), Positives = 83/192 (43%) Query: 24 VKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASAFITKVLLVPLIMTYAARNI 83 + A Q +VL + A ++ L +L +A K +L+P ++ R + Sbjct: 32 QRRLLTLIHLLAWQGVVLATGTALVALLTGQTELWFSAALTLGLKAILIPTVLHRLLRRL 91 Query: 84 PQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGLKPALAVALGHFLLGLLCIV 143 +A+ + L +V+ + P+ + + +AL LL L ++ Sbjct: 92 QVRGDVEAVLNIPLTLLAGIALVIFAFSLAAPITALTGPVTRGMVGIALAAVLLAFLMMI 151 Query: 144 SQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATDAIFAVIVMVLLARKIWRTH 203 ++R + Q+ G+ ++NG P +VE+G+A DA+ +++ + +I T Sbjct: 152 TRRKAISQVVGFLAVDNGLFFAATSATLGMPMIVELGVALDALIGFVILGVFFFQIRETF 211 Query: 204 GTLDVNNLTALK 215 ++D+ NL ++ Sbjct: 212 DSMDLQNLEHIR 223 >UniRef50_A1RWL6 NADH-ubiquinone oxidoreductase, chain 4L n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWL6_THEPD Length = 212 Score = 133 bits (336), Expect = 4e-30, Method: Composition-based stats. Identities = 66/209 (31%), Positives = 113/209 (54%), Gaps = 5/209 (2%) Query: 7 VNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASAFI 66 + A LM+LT+ ++ ++ R + Y Q+L+L SIF LS + +W +A + Sbjct: 8 IGACAALMVLTASYINEERNLRRATYAYCVQTLLLASIFFMLSTVE--WYFALWGLTAIL 65 Query: 67 TKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGLKP 126 TK +LVP + + + + E+ G +L ++ + + + + Sbjct: 66 TKAVLVPYFILRTTKRVDAVVEEEPYLGGWASHILLGALIAIGFAIGTRIV---SGWESV 122 Query: 127 ALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATDAI 186 L+V++ FL+GL +V++R+ L+QI G C ENGSHL LA++A PE VE+G+ TDA+ Sbjct: 123 PLSVSVALFLIGLHLMVTRRDALKQILGICHFENGSHLTLAVMAPGLPETVEVGVLTDAV 182 Query: 187 FAVIVMVLLARKIWRTHGTLDVNNLTALK 215 V+V LLA ++ + GTLD L+ L+ Sbjct: 183 LLVLVCCLLAEEMKKVVGTLDTGRLSLLR 211 >UniRef50_C5V247 Hydrogenase 4 membrane component n=4 Tax=Proteobacteria RepID=C5V247_9PROT Length = 222 Score = 130 bits (328), Expect = 3e-29, Method: Composition-based stats. Identities = 47/212 (22%), Positives = 87/212 (41%) Query: 5 MIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASA 64 VN LA LM+L +++ + +A Q +L ++ A L + Sbjct: 8 QFVNLLASLMLLVVFAMLAQRRILSLINLFAWQGGILALSTFVVAYSTAQHHLYYSAGLT 67 Query: 65 FITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGL 124 I KVLL+P ++ R + + L L+ +V+ + P+ Sbjct: 68 LILKVLLLPWLLHRLIRKLNVRWDVETLINIPTTMLVGIGLVIFSFNLAAPISQLSEGIT 127 Query: 125 KPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATD 184 + + +AL LL LL ++++R + Q+ + +EN P +VE GIA D Sbjct: 128 RGLIGIALASVLLSLLMMLTRRKAVSQVVAFLSLENSLFFAATSATQGMPLVVEFGIALD 187 Query: 185 AIFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 + A + + +I T +LD+ ++ LK Sbjct: 188 VLVATFIFGIFFFQIRETFESLDITHMEKLKD 219 >UniRef50_Q24ST6 Hydrogenase-4 component E n=2 Tax=Desulfitobacterium hafniense RepID=Q24ST6_DESHY Length = 218 Score = 130 bits (327), Expect = 4e-29, Method: Composition-based stats. Identities = 45/215 (20%), Positives = 97/215 (45%) Query: 2 TGSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWS 61 T + + ++ L+++ + + + Q++ L ++ + ++L + Sbjct: 4 TLENLQQLVLFALLALGLYIVGCVKLKKALMGWTWQAVFLSALIFLEGVKESEWEILAIA 63 Query: 62 ASAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMA 121 + + K ++P ++ A + + AA + +L + QP+ + Sbjct: 64 LLSLLVKGGVIPWVLKRTADLSHTQWVGEVFLHRTSSLVAAAALTILAYAITQPLLSLVE 123 Query: 122 TGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGI 181 L+ LA+A GLL +V ++ L Q+ G L++NG L LL P LVE+G+ Sbjct: 124 PALRNGLAIAFALLFYGLLLMVIRKVALVQVVGILLIDNGIFLAGFLLTSGMPLLVEVGV 183 Query: 182 ATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 D + V+++ +LA+++ +L+V L +LKG Sbjct: 184 IFDVLIGVLILGVLAQRMILKFDSLNVERLNSLKG 218 >UniRef50_P64681 Uncharacterized protein Rv0085/MT0092 n=17 Tax=Actinomycetales RepID=Y085_MYCTU Length = 220 Score = 130 bits (327), Expect = 4e-29, Method: Composition-based stats. Identities = 49/214 (22%), Positives = 91/214 (42%), Gaps = 1/214 (0%) Query: 4 SMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSAS 63 S++V+ AG ++L S+ ++ + R A Q L +I L+ + Sbjct: 7 SILVDFAAGGLVLASVLIVWRRDLRAIVRLLAWQGAALAAIPLLRGIRDNDRALIAVGIA 66 Query: 64 AFITKVLLVPLIMTYAARNIPQ-NIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMAT 122 + L++P ++ A L A L+ A + L + QPV Sbjct: 67 VLALRALVLPWLLARAVGAEAAAQREATPLVNTASSLLITAGLTLTAFAITQPVVNLEPG 126 Query: 123 GLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIA 182 A+ A L+ L + ++ + + Q G+ +++NG LL P +VE+G + Sbjct: 127 VTINAVPAAFAVVLIALFVMTTRLHAVSQAAGFLMLDNGIAATAFLLTAGVPLIVELGAS 186 Query: 183 TDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 D +FAVIV+ +L ++ R G D++ L L+ Sbjct: 187 LDVLFAVIVIGVLTGRLRRIFGDADLDKLRELRD 220 >UniRef50_Q2RXM1 NADH-ubiquinone oxidoreductase, chain 4L n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RXM1_RHORT Length = 221 Score = 129 bits (326), Expect = 5e-29, Method: Composition-based stats. Identities = 50/214 (23%), Positives = 102/214 (47%), Gaps = 8/214 (3%) Query: 10 LAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASAFITKV 69 ++ L+++TS V+ + + + Y CQS+++ +F L W+ +A ++K Sbjct: 9 ISLLLIVTSFVVVEWRYLKGAIFTYQCQSVLMALMFVLYGTALDNHALYYWAGTALVSKG 68 Query: 70 LLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVK-------LPMAT 122 +++P ++ + + + G A+ +LA ++ L + + Sbjct: 69 VIIPWLLRQYVNKVGAE-ETRPMMGAALSFILAVVVAALAFWWTFNHHDDLVITAELIGE 127 Query: 123 GLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIA 182 + LAVA ++G ++++R+ + + G CL+EN HL LA LA E IG+ Sbjct: 128 PYRLNLAVAAVVLVIGFYALLTRRDAFKIVIGLCLLENAVHLSLASLAPTIAETAMIGVV 187 Query: 183 TDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 TD + +V +M+ + R I+ G+ D N++ L G Sbjct: 188 TDVVISVWMMLYVVRSIYGAVGSTDTTNISQLNG 221 >UniRef50_D2L9G8 NAD-dependent dehydrogenase subunit n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L9G8_9DELT Length = 216 Score = 129 bits (326), Expect = 6e-29, Method: Composition-based stats. Identities = 38/215 (17%), Positives = 80/215 (37%), Gaps = 3/215 (1%) Query: 5 MIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLS---CLFAAEQLLIWS 61 + ++ ++ +L +++ R A Q +L + + L S Sbjct: 2 ELFQSVMVALVCVNLAYLAITRLRTLTRLTAVQGALLALVPLLFAGPETGVGHGHALFLS 61 Query: 62 ASAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMA 121 + F K + P ++ + N + G + + +L ++ + P Sbjct: 62 LAVFAIKGVGFPWLLARTLSRLEVNPVVEPYLGFNLSLVAGVAGLLFSLWLETRLPFPPG 121 Query: 122 TGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGI 181 AL GL +++++ L Q+ GY ENG L+ L+ + +E+ + Sbjct: 122 LFPPLLFPAALTTIFTGLTLVIARQKALTQVIGYLAAENGIFLLGTPLSGQGSVWLELSV 181 Query: 182 ATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 D AV VM + I +T ++DV +L+ Sbjct: 182 LLDVFVAVFVMGIALHHISKTFESIDVGRFCSLRD 216 >UniRef50_A7GWM9 Hydrogenase-4 component E n=8 Tax=Epsilonproteobacteria RepID=A7GWM9_CAMC5 Length = 220 Score = 129 bits (325), Expect = 6e-29, Method: Composition-based stats. Identities = 79/213 (37%), Positives = 130/213 (61%), Gaps = 1/213 (0%) Query: 5 MIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASA 64 I++ LA M++TSL V +++ +LS YA Q+L+LVSIF LS F AEQL +W+ A Sbjct: 8 EILDTLAICMIVTSLAVFGLRNLKLSVIVYAIQTLLLVSIFFLLSKKFDAEQLSMWAIVA 67 Query: 65 FITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGL 124 F TKV+LVP I+ + + + ++ + G + ++A L + + P+ L + Sbjct: 68 FFTKVILVPGILLWLIKKLNVVSEDEPVGGFFVSPIIAMGFSLALSMSIHPIFLKFSLIK 127 Query: 125 KPALAVALGHFLL-GLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIAT 183 + + +A G + G+ + + + ++QI YCL ENG HL LAL+A+ + ELVE+GI T Sbjct: 128 EEIMLIAAGTIFMMGIFGFMLRNSFIKQILAYCLFENGIHLSLALMAYNSHELVELGILT 187 Query: 184 DAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 DAIFAVI+M +LA + ++ + +LD + + L+G Sbjct: 188 DAIFAVIIMSVLAIRFYKAYDSLDTSKASNLRG 220 >UniRef50_A5FYC6 Hydrogenase 4 membrane component (E)-like protein n=18 Tax=Bacteria RepID=A5FYC6_ACICJ Length = 229 Score = 128 bits (323), Expect = 1e-28, Method: Composition-based stats. Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 1/211 (0%) Query: 6 IVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASAF 65 + + LAG ++L SL ++ A + +L + L A +L I +A A Sbjct: 17 LAHVLAGALVLVSLMMLYQDRLPALVNVLALHAALLGVAVGWQAWLQRAPELYITAAIAI 76 Query: 66 ITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGLK 125 K + +PL + + + + + G ++ L +V L V+ + Sbjct: 77 GFKAVAIPLALHRIIERLDIHREVETVGGISLTMLAGIGLVALSLLVMLRTAAQANALAR 136 Query: 126 PALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATDA 185 LA+AL L+G+L +V++RN + QI G+ ++ENG L A A P +VEI +A Sbjct: 137 EDLALALSVILIGMLMMVTRRNAVSQIAGFMMLENGLILAAA-GAQGMPLVVEISVAFSI 195 Query: 186 IFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 + A IV+ + +I T+D L A +G Sbjct: 196 LIAFIVIGVFLFRIRERFDTVDSAALDAFRG 226 >UniRef50_Q6APF0 Hypothetical membrane protein n=1 Tax=Desulfotalea psychrophila RepID=Q6APF0_DESPS Length = 217 Score = 125 bits (315), Expect = 1e-27, Method: Composition-based stats. Identities = 40/215 (18%), Positives = 82/215 (38%), Gaps = 3/215 (1%) Query: 5 MIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLI-WSAS 63 +++L+ +F + + A Q + I L I + Sbjct: 3 NFTEVTLVIILLSVMFSLGTSRLKTLVTIMAWQGAAVSIIPLFLRDHGDFGAGAIGFFLL 62 Query: 64 AFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATG 123 I K +++P ++ A + + + G I+L+ F+ ++ + G Sbjct: 63 MLIVKGIIIPGLLYVALKRVVIKREIVPIIGYHASIFTGLGIILVSVFITNYLRPSLNGG 122 Query: 124 LKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAP--ELVEIGI 181 + L A+ G ++++ + Q+ GY ++ENG +L+ L + +VE GI Sbjct: 123 EEIVLITAITTMASGFFLMMARTKAITQVIGYLMLENGIYLIGTALTKHSHTLYIVEFGI 182 Query: 182 ATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 D + V+VM ++ I +D L LK Sbjct: 183 LLDILVGVMVMGIILHNINSAFDDVDTTLLGRLKD 217 >UniRef50_C1XWY5 Hydrogenase 4 membrane component (E) n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XWY5_9DEIN Length = 193 Score = 121 bits (303), Expect = 2e-26, Method: Composition-based stats. Identities = 46/196 (23%), Positives = 86/196 (43%), Gaps = 3/196 (1%) Query: 21 VISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASAFITKVLLVPLIMTYAA 80 ++ KS YA ++ L L++ + + K + +P + + Sbjct: 1 MVGRKSLDAWIRLYAL--QNVLLALLALVLAEGERHLVLAGVALLLIKGVFIPRYLFWLL 58 Query: 81 RNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGLKPALAVALGHFLLGLL 140 + + ++ + LL ++V + V L A + A+ VALG LLG+L Sbjct: 59 ERLGISHEVESYLSIPLSLLLGGVLVAVGFRVGSSFVLEGARLPE-AVPVALGLILLGML 117 Query: 141 CIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATDAIFAVIVMVLLARKIW 200 + S++ + Q+ G+ +ENG L+ P +E+G+A DA AV++ +L +I Sbjct: 118 SMASRKKAVTQVLGFLALENGVFLLALAETHGLPLFIELGVALDAFAAVVLAGVLISRIQ 177 Query: 201 RTHGTLDVNNLTALKG 216 T G +D + LKG Sbjct: 178 STFGHIDTARMRDLKG 193 >UniRef50_A0LSU3 Hydrogenase subunit n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LSU3_ACIC1 Length = 224 Score = 120 bits (301), Expect = 4e-26, Method: Composition-based stats. Identities = 50/211 (23%), Positives = 93/211 (44%) Query: 6 IVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASAF 65 + + +A L++L ++ YA QSL+L + A + L + + Sbjct: 14 VADVIAVLVLLAEFGMLRAALLPAQIRLYAGQSLLLAVLAAIAAQQRNVPDLYALAVLSA 73 Query: 66 ITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGLK 125 + KVL VP ++ R+ +I + G A L A L F + + A + Sbjct: 74 VLKVLAVPAVLRRMLRDTGTDIAGSGVLGVATRTLCALLATAFGFFATAGLPIRAAVLPR 133 Query: 126 PALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATDA 185 AL++A+ L+ + ++ +R+++ Q G+ MEN L ++A P L+E+ + D Sbjct: 134 TALSLAVAAVLVAFILMIFRRDVVSQAVGFFSMENAVSLASLVIAATMPFLLEVVLLFDL 193 Query: 186 IFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 + AV+V L R +L L+ L+G Sbjct: 194 LVAVVVFSALIRIHHNRRQSLSTRKLSGLRG 224 >UniRef50_B8IYV7 NAD-dependent dehydrogenase subunit n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8IYV7_DESDA Length = 207 Score = 118 bits (297), Expect = 1e-25, Method: Composition-based stats. Identities = 41/214 (19%), Positives = 82/214 (38%), Gaps = 7/214 (3%) Query: 3 GSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSA 62 ++ + L+ML +L ++ A Q ++L ++ +L + + Sbjct: 1 MESLLQSCLFLLMLNNLLMLGTTRLMWLIRLTAFQGILLAAMLLSL-------DHALLAG 53 Query: 63 SAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMAT 122 + + K +L+P ++ + + A+ L ++L ++ + A Sbjct: 54 AVLLIKGVLLPGLLWRTRERLHARQRMRPRLHVAVGVLAGMGGLVLSLWLEARLLTLPAL 113 Query: 123 GLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIA 182 L AL GL+ +V + L Q+ GY + ENG L+ L E+ + Sbjct: 114 FPPLLLPTALTTLFCGLILVVGRTTALAQVIGYLVAENGIFLLGMPLMTAGTIWFELALL 173 Query: 183 TDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 D AV VM + I T ++DV +L+ Sbjct: 174 LDVFVAVFVMGIAINHISNTFESIDVGRFRSLRD 207 >UniRef50_A6UVJ8 Putative uncharacterized protein n=1 Tax=Methanococcus aeolicus Nankai-3 RepID=A6UVJ8_META3 Length = 210 Score = 117 bits (293), Expect = 3e-25, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 75/202 (37%), Gaps = 2/202 (0%) Query: 9 NLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASAFITK 68 + ++ T L ++ A QS ++ + + LI + S + + Sbjct: 10 LIIAAIIGTVLLTLNTHRLFSLVKTIAVQSFLVSVLTIIIGGGEITTYGLIIALSTLVIR 69 Query: 69 VLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGLKPAL 128 +P + YA R L G +++ + + L K Sbjct: 70 SFFIPSFLMYATRKGNIKRELNPLIGYQTSLFFGLIVIGIASIWSG--YLNFDISEKLLF 127 Query: 129 AVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATDAIFA 188 + + L +++++ + Q+ Y ++ENG +V ++ +VE GI D + Sbjct: 128 IGGMTTIIPALFLLMARKKAITQVSSYLMLENGISIVGLMIGKNMQYVVEFGILLDILIC 187 Query: 189 VIVMVLLARKIWRTHGTLDVNN 210 V++M ++ +I + + T D Sbjct: 188 VMLMTIIINQINKLYTTEDYKK 209 >UniRef50_B6WWH1 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WWH1_9DELT Length = 206 Score = 112 bits (281), Expect = 9e-24, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 63/184 (34%), Gaps = 7/184 (3%) Query: 26 SYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASAFITKVLLVPLIMTYAARNIPQ 85 R Q + L L + + + + K L+P ++ R I Sbjct: 24 RLRTLINLVTAQGI-------LLGGLLLMHDHALLAVAVLLIKGGLLPWLLHRTRRQIGA 76 Query: 86 NIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGLKPALAVALGHFLLGLLCIVSQ 145 + K G + L ++ ++ + + L L GLL +V + Sbjct: 77 DPHIKPRLGFGLAVLTGLACLVFSLWLEGRLPMTPGLFPPLLLPAGLTTLFCGLLLVVGR 136 Query: 146 RNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATDAIFAVIVMVLLARKIWRTHGT 205 L Q+ GY + ENG L+ L E+ + D AV VM + I T + Sbjct: 137 ATALSQVMGYLVAENGIFLLGIPLMTAGAVWFELTLLLDIFVAVFVMGIAINHISHTFES 196 Query: 206 LDVN 209 +DV Sbjct: 197 IDVG 200 >UniRef50_C8XAS1 Putative uncharacterized protein n=2 Tax=Actinomycetales RepID=C8XAS1_NAKMY Length = 220 Score = 110 bits (275), Expect = 4e-23, Method: Composition-based stats. Identities = 50/214 (23%), Positives = 98/214 (45%), Gaps = 1/214 (0%) Query: 4 SMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSAS 63 + ++N G M+L ++ ++ + + Q L L + A L+ A+ QL + + Sbjct: 7 TQLLNVTVGAMLLCAVIILWRRELAAIISVFLVQGLALAATVALLAVQQASAQLGVVAVL 66 Query: 64 AFITKVLLVPLIMTYAARNIPQ-NIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMAT 122 + +V ++P ++ + + L L+AA + +L V QP+ + Sbjct: 67 VLVLRVGVLPALLRRTLAHAGPGQRETRPLVNEIASLLVAAALTMLAYAVAQPLVALDPS 126 Query: 123 GLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIA 182 A+ AL L+G +V++R L Q+ G+ L++NG V L +VE+GI+ Sbjct: 127 PATHAIPAALAVALIGFFVLVTRRLALSQLVGFLLLDNGITAVGVLTTAELGLVVELGIS 186 Query: 183 TDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 D + V+V+ +L +I + G D++ L L Sbjct: 187 LDVLLVVLVLQVLKTRIRQAFGRTDIDELRELHD 220 >UniRef50_D0L1P2 Hydrogenase 4 membrane component (E) n=3 Tax=Proteobacteria RepID=D0L1P2_HALNC Length = 226 Score = 109 bits (273), Expect = 6e-23, Method: Composition-based stats. Identities = 50/216 (23%), Positives = 94/216 (43%), Gaps = 3/216 (1%) Query: 4 SMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSAS 63 S I + L + ++ + ++ R +A +S V+ ++ A + +L I +A Sbjct: 11 SSIFSFLVIVALILAFVMLGSHWIRNHVYAFAAESWVIAALSAAIGFYGHYPELFIIAAL 70 Query: 64 AFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKL---PM 120 + + ++P+++ R++ N L P+ L+ L+V+ + + L + Sbjct: 71 TALLRGTVLPILLLRIIRDLKLNREFTPLLQPSSSLLVGGLLVVFSYALAHKIGLRLDLV 130 Query: 121 ATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIG 180 + AL G L+G L +V + + I G ++ENG L +L P L+E+ Sbjct: 131 NSIAVLALTTMFGMKLIGFLMLVLRTEAVSSILGLLVIENGIFLGSQILVPGMPLLLEMV 190 Query: 181 IATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG 216 I D + V LL R + R GT +LT L G Sbjct: 191 ILFDLLIIVSTFGLLIRYLHREIGTTSSRDLTRLVG 226 >UniRef50_A7I7D2 Hydrogenase-4 component E n=3 Tax=Methanomicrobia RepID=A7I7D2_METB6 Length = 230 Score = 108 bits (271), Expect = 1e-22, Method: Composition-based stats. Identities = 42/204 (20%), Positives = 85/204 (41%), Gaps = 5/204 (2%) Query: 6 IVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASAF 65 +V L +++TS ++I+ ++ YA QSL LV+I L+ A LL + Sbjct: 10 LVKILFVCVIVTSAYIITTRNLVSLVRVYALQSLSLVAIALALAWYENAAILLAIALLTL 69 Query: 66 ITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGLK 125 + KV+++P + I + F +LL +L +++ ++ A Sbjct: 70 VFKVIVIPYFIATVQEKIRIKRDIEFHFLSPASSLLISLALMIVVYITLSRVFSPAPAEG 129 Query: 126 PAL----AVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGI 181 + + ++G++ S++ + ++ GY MENG L P ++E I Sbjct: 130 SLFFFGAVIGISLVMMGMMVTFSRKKAITKVLGYLSMENGVLLFGLFATE-LPFIIEFLI 188 Query: 182 ATDAIFAVIVMVLLARKIWRTHGT 205 D + +++ +L I T Sbjct: 189 VIDLVILILLTTILTVGIDSTLED 212 >UniRef50_B0SCU9 Formate hydrogenase, subunit E n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SCU9_LEPBA Length = 203 Score = 106 bits (265), Expect = 6e-22, Method: Composition-based stats. Identities = 50/192 (26%), Positives = 80/192 (41%), Gaps = 3/192 (1%) Query: 5 MIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSA-S 63 MI + + L++LT + ++ F + Q L+L IF + Q I Sbjct: 1 MIYDFIYLLLLLTGIVILVENRLSRIILFLSFQGLLL--IFPVIQTHEGDWQHAISLIVL 58 Query: 64 AFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATG 123 + K LL P I+ + A N FG L L ++L + + V L Sbjct: 59 VVLFKALLTPWILNWTANKSKMNESTTPRFGYLATLLFMVLGLVLAVKITEGVSLLSIPV 118 Query: 124 LKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIAT 183 K L + +G+LC V +RN L I G+C+ ENG ++ +L P +E G Sbjct: 119 HKIGLIYVILLVYVGILCFVVRRNWLALIAGFCVFENGIFVLTMVLDKGLPFGLEFGSFL 178 Query: 184 DAIFAVIVMVLL 195 DAI ++ +L Sbjct: 179 DAILVIVSGGIL 190 >UniRef50_A6Q6W2 Ni-Fe hydrogenase, membrane subunit HyfE n=3 Tax=Epsilonproteobacteria RepID=A6Q6W2_SULNB Length = 197 Score = 103 bits (258), Expect = 4e-21, Method: Composition-based stats. Identities = 40/193 (20%), Positives = 81/193 (41%), Gaps = 1/193 (0%) Query: 6 IVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASAF 65 +V+ L GL + + + + +Y+ SL+L + + + +LI + Sbjct: 1 MVDFLIGLFLASLITALFATRLYRLLLWYSLNSLMLGLLALFIGKELDDKAMLITGVATI 60 Query: 66 ITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGLK 125 + K + +P ++ +L I++ ++ P+ M+ Sbjct: 61 LIKAVGIPYFFKNMSQKFHFVRQITPEIKVQYAIMLIPAILVFTFYLADPITHMMSGNA- 119 Query: 126 PALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATDA 185 +A+++ L LL ++ RN+ +I G+ MEN L+ P LVE+GI D Sbjct: 120 NYVAISISSLFLSLLLMMEHRNVAPKIIGFLSMENALFLLGITATDGMPMLVELGIFFDL 179 Query: 186 IFAVIVMVLLARK 198 + A++V+ LL K Sbjct: 180 LMAIVVINLLFHK 192 >UniRef50_C6PUG5 Hydrogenase, membrane subunit 2-like protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PUG5_9CLOT Length = 203 Score = 102 bits (254), Expect = 1e-20, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 87/210 (41%), Gaps = 8/210 (3%) Query: 6 IVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASAF 65 ++ L +++L+ + + ++ +L +A QSL + I L I Sbjct: 1 MLQLLLAIVILSGILICGLRRVKLLVLSFAFQSLAITFICIILGYNTKEIHYYIMGLLTL 60 Query: 66 ITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGLK 125 I KV+++P I+ + R + + +L+ +++ + Sbjct: 61 IIKVIIIPYIINKSTRYLKVKRELDLIINAVNSFVLSGFFIIIVCAFFRNYD-------N 113 Query: 126 PALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATDA 185 L A+ L+G ++ ++ + Q+ G+ +ENG L + ++E +A + Sbjct: 114 TYLKTAVFLALVGGTLMIGRKKAITQMIGFLTIENGIILFEMSVVK-LSLILEAWMALEV 172 Query: 186 IFAVIVMVLLARKIWRTHGTLDVNNLTALK 215 + ++M ++ I +T T++ + L+ LK Sbjct: 173 LVLALLMGIMIFNINKTFDTINTDYLSNLK 202 >UniRef50_B5YKQ7 Putative uncharacterized protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKQ7_THEYD Length = 214 Score = 101 bits (253), Expect = 1e-20, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 84/207 (40%), Gaps = 1/207 (0%) Query: 7 VNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASAFI 66 + + ++ + K+ + S SL +V T+ + L + + Sbjct: 1 MEIIYIAILFFTFLTGEAKNLKFSVLSLVPHSLFIVIAVFTIGYINEISSLYLIGILDLV 60 Query: 67 TKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGLKP 126 + +L+P+++ +N I K + L+ +++ + V+ K + Sbjct: 61 VRAILMPILLLKCLKN-RLEIETKPSISHPLSIALSIVVLSVGYHFVEIFKSFYLPYVIS 119 Query: 127 ALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATDAI 186 + + L F+ G +S+R+I++ I + ++ENG H ++ + P+ +EI + + I Sbjct: 120 SFSCGLTLFIYGFCLFMSKRDIVKMIISFFIIENGIHFLIISMIPHMPKFIEISLTFNFI 179 Query: 187 FAVIVMVLLARKIWRTHGTLDVNNLTA 213 A++ V L ++ ++ Sbjct: 180 IAILFFVYLIIRLNEVFVKEEIKKFKE 206 >UniRef50_A4YGN8 Hydrogenase 4 membrane component (E)-like protein n=1 Tax=Metallosphaera sedula DSM 5348 RepID=A4YGN8_METS5 Length = 209 Score = 97.5 bits (242), Expect = 2e-19, Method: Composition-based stats. Identities = 34/192 (17%), Positives = 75/192 (39%), Gaps = 3/192 (1%) Query: 5 MIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASA 64 I+ L+ L+ +T+L++ + + QSL++ +I + +I + Sbjct: 7 EIILLLSFLLPVTALYIQGQAYFNPAIKVVGVQSLIIGTISLVYYLFTDNIEFIILAGII 66 Query: 65 FITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGL 124 F T+V L P I+ + + + + ++ L V V Sbjct: 67 FFTRVFLTPYILLRTVKYREWDREKVKVLSSFVLNLT--FFFSATLLVAYAVFTRAIPTE 124 Query: 125 KPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATD 184 + + + F GL I S+++ + I GY +EN ++ L P L++ + D Sbjct: 125 YEQVIMPMTLFFQGLFLIASRKSTVAHILGYIELENSLVMLGIFLIPP-PILIDATVFLD 183 Query: 185 AIFAVIVMVLLA 196 + V++ ++ Sbjct: 184 VLALVVISSIII 195 >UniRef50_Q978D8 Putative uncharacterized protein TVG1530142 n=2 Tax=Thermoplasmatales RepID=Q978D8_THEVO Length = 217 Score = 95.6 bits (237), Expect = 1e-18, Method: Composition-based stats. Identities = 30/198 (15%), Positives = 66/198 (33%), Gaps = 8/198 (4%) Query: 6 IVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASAF 65 +V ++ L+ +++ ++ + + QS+++ + + + I Sbjct: 7 VVYLISSLIAISAFYIQGQEFIASMIRGQSVQSVLIAVVAFIIGWQERSYDFFILGILII 66 Query: 66 ITKVLLVPLIMTYAARNIPQNIPEK-------ALFGPAMMALLAALIVLLCAFVVQPVKL 118 I + LV + + E+ L + + +I + + Sbjct: 67 ILRAFLVNYFLQKRIPKQKVYLYERKVSLSYLFLLDLIFIVISVFIIYSIAFSGIVLHSF 126 Query: 119 PMATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVE 178 G L L F GL I S+R + GY EN L L P ++E Sbjct: 127 LGNGGNSSVLVFPLTLFFQGLFLIASRRTTFTHVIGYVEEENSLVLFAMFLLP-IPIIIE 185 Query: 179 IGIATDAIFAVIVMVLLA 196 + D + V++ ++ Sbjct: 186 ASVFLDVLALVVISSIVV 203 >UniRef50_Q2FKS7 Putative uncharacterized protein n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FKS7_METHJ Length = 230 Score = 94.8 bits (235), Expect = 2e-18, Method: Composition-based stats. Identities = 44/202 (21%), Positives = 84/202 (41%), Gaps = 5/202 (2%) Query: 7 VNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASAFI 66 + L++++ F++S +S + Y QS +LV I L L LL+ +A + Sbjct: 11 IRICLILVLVSGGFLLSSRSLKNLVRTYQFQSFLLVLIALGLVVLEEHTILLLVAALTVV 70 Query: 67 TKVLLVPLIMTYAARNIPQNIPEKALF----GPAMMALLAALIVLLCAFVVQPVKLPMAT 122 +KV +P + I K + G M+++L L+V +C + ++ Sbjct: 71 SKVWGIPACIRLIQERIHIQQDLKFSYLRPPGALMLSILIILLVYVCFAQILESLYAASS 130 Query: 123 GLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIA 182 + + L+GLL + +R + ++ GY MENG + P +E I Sbjct: 131 LFFLGSVIGVSLVLMGLLAVCIRRMAISKVIGYLSMENGVLAFGLFVTE-LPFFIEFVIV 189 Query: 183 TDAIFAVIVMVLLARKIWRTHG 204 D I V++ ++ I + Sbjct: 190 IDLIILVLLTSIMTVGIDSSIE 211 >UniRef50_C3NHY0 Putative uncharacterized protein n=9 Tax=Sulfolobus RepID=C3NHY0_SULIN Length = 213 Score = 94.1 bits (233), Expect = 3e-18, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 83/200 (41%), Gaps = 5/200 (2%) Query: 1 MTGSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIW 60 M S I+ L+ +++++ ++ ++ + A QS ++ + L + +I Sbjct: 1 MINSEILELLSTFILISAFYIQGQAYFKPAIYAQAIQSTLIAILAFHLGISLFSIDYIIL 60 Query: 61 SASAFITKVLLVPLIMTY-AARNIPQNIPEKALFGPAMMALLAALIV---LLCAFVVQPV 116 + + + +L+ + + + P ++ LA I+ ++ FV++ + Sbjct: 61 GITVILLRTVLITIFLFRGLVKEKPGTRESSKGVASELVLNLAFSIIASLVVYYFVLEKI 120 Query: 117 KLPMATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPEL 176 + L A GL I+S+++ + Q G+ EN + L LL P L Sbjct: 121 PISTEINNTLMLLFAFILLFQGLFLIISRKSTIFQFIGFIEEENSTILFGILLLP-IPFL 179 Query: 177 VEIGIATDAIFAVIVMVLLA 196 +E+ + D + VI+ +L Sbjct: 180 IEVSVFLDVLGLVIISSILT 199 >UniRef50_Q04P28 Formate hydrogenase, subunit E n=4 Tax=Leptospira RepID=Q04P28_LEPBJ Length = 206 Score = 94.1 bits (233), Expect = 3e-18, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 67/182 (36%), Gaps = 2/182 (1%) Query: 8 NNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASAFIT 67 +++L + ++ + A QS+ L + L + + Sbjct: 4 EFSYLILLLLGVVILLENRLKRLVLLLAFQSVFL--LVPLFEDGGYGTHSLFLAGMIILF 61 Query: 68 KVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGLKPA 127 KV+L P I+ + AR G L + ++ F++ K + + Sbjct: 62 KVILTPWILYWTARRTNSVESTFPKVGYIPTFALLMVGAVVGFFILGFTKFRFGEVNQMS 121 Query: 128 LAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATDAIF 187 +G++ V +R+ + I + + ENG+ L+ +L P +E G DA+F Sbjct: 122 FLYTFLLLYVGMVGFVVRRHWVGVIASFAVFENGTFLLTQILRTELPLGIEFGSFLDAVF 181 Query: 188 AV 189 + Sbjct: 182 II 183 >UniRef50_Q3Z679 Hydrogenase subunit, putative n=5 Tax=Dehalococcoides RepID=Q3Z679_DEHE1 Length = 226 Score = 93.3 bits (231), Expect = 5e-18, Method: Composition-based stats. Identities = 46/208 (22%), Positives = 92/208 (44%), Gaps = 4/208 (1%) Query: 1 MTGSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIW 60 + + I+ L L+++TS V+ +S YA QSL++ + + LL Sbjct: 5 IPLNDILKILLVLVLVTSALVLWQRSLTSLFKTYALQSLLVALVALAFFIHDSHLTLLFI 64 Query: 61 SASAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPM 120 + KV L+P I+ + + F + +L+ +++++ + V L Sbjct: 65 ALLTLFGKVFLIPRILNRILFQMNIRRDLEFRFLYPVSSLIVSILLVFGVYQVFSSLLGE 124 Query: 121 ATGLKPA---LAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELV 177 + + + L+G++ I S++ +L +I GY MENG+ L +A P ++ Sbjct: 125 VMPERLFTLGAVIGVSMALMGMMVIFSRKKMLTKIVGYLSMENGAILFGLFVAE-LPFIL 183 Query: 178 EIGIATDAIFAVIVMVLLARKIWRTHGT 205 EI + D + V+++ +LA I T Sbjct: 184 EILVLIDLVILVLLLTVLAFGIDSTIED 211 >UniRef50_B5I9E5 Hydrogenase 4 membrane component (E)-like protein n=2 Tax=Aciduliprofundum boonei T469 RepID=B5I9E5_9EURY Length = 208 Score = 91.4 bits (226), Expect = 2e-17, Method: Composition-based stats. Identities = 39/190 (20%), Positives = 78/190 (41%), Gaps = 4/190 (2%) Query: 6 IVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASAF 65 ++ L L++L +I+ Q+++L + + +L+ + Sbjct: 7 TIDFLGVLILLYGFVIIAENYIHSVIRHLQAQTIILSLLIGIVGFYLRMWELIALAIFTL 66 Query: 66 ITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGLK 125 I + L+P I+ + + A +L+A +I + + V + K Sbjct: 67 IFRAWLIPNILLKDIKKERV-WEHREFGAKAKSSLIAGIITAIVGIIAYLVIYNVIGTWK 125 Query: 126 PALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATDA 185 + L F L ++ + +RN L QI GY + EN + + + L+E+GI D Sbjct: 126 GMIPFILLLFGLLIIVM--RRNALAQISGYIVEENALLYLGI-VFYPIGFLLEVGILLDV 182 Query: 186 IFAVIVMVLL 195 I AV++ V+L Sbjct: 183 IGAVLLAVIL 192 >UniRef50_A9FF75 Hypothetical transmembrane protein, probably involved in the FHL pathway n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FF75_SORC5 Length = 210 Score = 81.4 bits (200), Expect = 2e-14, Method: Composition-based stats. Identities = 26/144 (18%), Positives = 49/144 (34%), Gaps = 1/144 (0%) Query: 28 RLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASAFITKVLLVPLIMTYAARNIPQNI 87 R S +CQ ++ + L+ + + + L P+ + R+ Sbjct: 22 RTSLAGLSCQGFLMAWVAYRLNPDLGTVGDWVTLGDLVLLRGLAAPIALYRVLRSQNAPR 81 Query: 88 PEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGLKPALAVALGHFLLGLLCIVSQRN 147 + + +A +VLL + + + +AVA LLG L + +Q Sbjct: 82 RNDVISPNLLSWTIALGVVLLAFNFSESLVPEHGE-RRTLVAVAAAGVLLGFLVLSTQSG 140 Query: 148 ILRQIFGYCLMENGSHLVLALLAW 171 Q+ G +EN L A Sbjct: 141 PFSQMVGVLRIENAIALFELSGAH 164 >UniRef50_Q6L0T9 Hypothetical membrane protein n=1 Tax=Picrophilus torridus RepID=Q6L0T9_PICTO Length = 202 Score = 50.9 bits (121), Expect = 3e-05, Method: Composition-based stats. Identities = 26/178 (14%), Positives = 64/178 (35%), Gaps = 5/178 (2%) Query: 7 VNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASAFI 66 + ++ +M+ +L+V + + R ++++L + + + +I I Sbjct: 4 IYIISAFIMIAALYVQTQQYIRAMIRGIVIEAMLLGILSIYIGIILKEPDFIILGILIVI 63 Query: 67 TKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGLKP 126 + L+ ++ I I + G A +L+ + L+ AF + L Sbjct: 64 LRGFLISYMLERRIPGIK-EIYREKHSGLASSLILSIVFSLVPAFFIYYYIFN---ILSN 119 Query: 127 ALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATD 184 + L L L + +++ + Y EN L+ + ++E + D Sbjct: 120 IIVFPLIILFLALFLFIFRKSTFAHVMAYIEEENAMILLAIFIIPVP-FIIEASVLLD 176 >UniRef50_Q21TB6 Putative uncharacterized protein n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21TB6_RHOFD Length = 202 Score = 49.0 bits (116), Expect = 1e-04, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 58/171 (33%), Gaps = 5/171 (2%) Query: 11 AGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASAFITKVL 70 L ++ ++ + ++ + + Q+L L I T + +L + + Sbjct: 5 LILCLVATVIPVFFGKIHVAPAWLSLQALALGWISMTRH-SELSLHVLALGLEVLLVRAW 63 Query: 71 LVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGLKPALAV 130 LVP ++ A + +A +++L A L V Sbjct: 64 LVPTLLRRALSGHSAARQ-DLMPSNLFAWGVAISLIILAFRFGDG---ARADVRALTLGV 119 Query: 131 ALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGI 181 ++ L + + R + Q+ G MEN L +L+ P V + + Sbjct: 120 VAATVMIAFLILATNREPVAQLVGLLFMENALALFESLMPEPWPLPVHLAV 170 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.323 0.163 0.420 Lambda K H 0.267 0.0495 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,162,234,546 Number of Sequences: 3077464 Number of extensions: 46394808 Number of successful extensions: 279382 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 145 Number of HSP's successfully gapped in prelim test: 703 Number of HSP's that attempted gapping in prelim test: 278438 Number of HSP's gapped (non-prelim): 1236 length of query: 216 length of database: 1,040,396,356 effective HSP length: 123 effective length of query: 93 effective length of database: 661,868,284 effective search space: 61553750412 effective search space used: 61553750412 T: 11 A: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.2 bits) S2: 91 (39.4 bits)