BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (131 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q46864 Uncharacterized HTH-type transcriptional regulat... 273 1e-72 UniRef50_Q2Y6W9 Transcriptional regulator, XRE family n=2 Tax=Ni... 134 6e-31 UniRef50_C6P435 Transcriptional regulator, XRE family n=1 Tax=Si... 106 2e-22 UniRef50_B9W0T3 Transcriptional regulator n=2 Tax=Shewanella Rep... 103 2e-21 UniRef50_A5GA93 Helix-turn-helix domain protein n=1 Tax=Geobacte... 101 6e-21 UniRef50_C7RJM0 Transcriptional regulator, XRE family n=1 Tax=Ca... 100 1e-20 UniRef50_C6MW82 Transcriptional regulator, XRE family n=1 Tax=Ge... 96 2e-19 UniRef50_B8GT54 Transcriptional regulator, XRE family n=1 Tax=Th... 94 1e-18 UniRef50_C6N7W9 Transcriptional regulator n=1 Tax=Legionella dra... 88 8e-17 UniRef50_Q58KB7 ORF170 n=2 Tax=Bacteria RepID=Q58KB7_9BACT 87 1e-16 UniRef50_A7BW93 Transcriptional regulator, XRE family n=1 Tax=Be... 87 1e-16 UniRef50_A4U5T1 Transcriptional regulator, XRE family n=1 Tax=Ma... 87 1e-16 UniRef50_A1BG77 Transcriptional regulator, XRE family n=7 Tax=Ch... 83 3e-15 UniRef50_Q1IJ02 Transcriptional regulator, XRE family n=2 Tax=Ba... 80 2e-14 UniRef50_Q07J16 Transcriptional regulator, XRE family n=2 Tax=Pr... 79 6e-14 UniRef50_C4XJ50 Xre family DNA-binding protein n=3 Tax=Desulfovi... 78 7e-14 UniRef50_Q1QEY5 Transcriptional regulator, XRE family n=1 Tax=Ni... 70 2e-11 UniRef50_C0GU77 Transcriptional regulator with HTH domain protei... 69 5e-11 UniRef50_A7BUF7 Transcriptional regulator, Cro/CI family n=1 Tax... 66 4e-10 UniRef50_Q2LYD1 Transcriptional regulator with HTH domain n=1 Ta... 64 2e-09 UniRef50_A7BYA6 Transcriptional regulator protein n=1 Tax=Beggia... 64 2e-09 UniRef50_C3K4N6 Putative uncharacterized protein n=1 Tax=Pseudom... 62 6e-09 UniRef50_A5G9X9 Putative uncharacterized protein n=1 Tax=Geobact... 60 2e-08 UniRef50_Q4KHV0 Putative uncharacterized protein n=1 Tax=Pseudom... 59 5e-08 UniRef50_Q1N9W5 Transcriptional regulator, XRE family protein n=... 56 3e-07 UniRef50_C9KLV8 Toxin-antitoxin system, antitoxin component, Xre... 55 7e-07 UniRef50_UPI0001907A5F XRE family transcriptional regulator n=1 ... 54 2e-06 UniRef50_Q0A690 Putative uncharacterized protein n=1 Tax=Alkalil... 50 3e-05 UniRef50_C5V7T9 Putative uncharacterized protein n=1 Tax=Gallion... 50 3e-05 UniRef50_C9P136 Putative uncharacterized protein n=1 Tax=Vibrio ... 49 7e-05 UniRef50_Q1YRR7 Helix-turn-helix motif protein n=2 Tax=gamma pro... 45 5e-04 UniRef50_A3TSK6 Putative uncharacterized protein n=1 Tax=Oceanic... 45 7e-04 UniRef50_D0SHI7 Transcriptional regulator n=1 Tax=Acinetobacter ... 45 0.001 UniRef50_C8PU52 Transcriptional regulator, XRE family n=2 Tax=En... 45 0.001 UniRef50_A4XM96 Helix-turn-helix domain protein n=2 Tax=Clostrid... 45 0.001 UniRef50_A2RP91 Predicted helix-turn-helix containing protein n=... 44 0.001 UniRef50_A4E6W9 Putative uncharacterized protein n=1 Tax=Collins... 44 0.002 UniRef50_A7HUI5 Helix-turn-helix domain protein n=1 Tax=Parvibac... 43 0.003 UniRef50_B6IPE3 DNA-binding protein, putative n=1 Tax=Rhodospiri... 43 0.003 UniRef50_A1U7F0 Virulence gene repressor RsaL n=4 Tax=Proteobact... 43 0.003 UniRef50_B2UKR2 Transcriptional regulator, XRE family n=1 Tax=Ak... 43 0.003 UniRef50_C3JZL6 Putative uncharacterized protein n=1 Tax=Pseudom... 42 0.005 UniRef50_C6HUS9 Helix-turn-helix domain protein n=2 Tax=Leptospi... 41 0.009 UniRef50_C5CDA8 Transcriptional regulator, XRE family n=1 Tax=Ko... 40 0.016 UniRef50_A6Q854 Putative uncharacterized protein n=1 Tax=Sulfuro... 40 0.017 UniRef50_A4J0H7 Putative uncharacterized protein n=1 Tax=Desulfo... 40 0.026 UniRef50_Q2RPT5 Transcriptional regulator, XRE family n=3 Tax=Al... 40 0.030 UniRef50_P11408 Modification methylase MspI n=3 Tax=Proteobacter... 40 0.030 UniRef50_UPI0001AF457D hypothetical protein Psyrpo1_28742 n=1 Ta... 39 0.048 UniRef50_C4Z706 Putative uncharacterized protein n=3 Tax=Clostri... 39 0.054 UniRef50_A8GWH9 Putative transcriptional regulator n=2 Tax=Ricke... 39 0.059 UniRef50_Q9KMA5 Antitoxin higA-2 n=32 Tax=Proteobacteria RepID=H... 38 0.077 >UniRef50_Q46864 Uncharacterized HTH-type transcriptional regulator ygiT n=58 Tax=Proteobacteria RepID=YGIT_ECOLI Length = 131 Score = 273 bits (698), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 131/131 (100%), Positives = 131/131 (100%) Query: 1 MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAF 60 MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAF Sbjct: 1 MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAF 60 Query: 61 RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVL 120 RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVL Sbjct: 61 RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVL 120 Query: 121 DKHPELLNEIR 131 DKHPELLNEIR Sbjct: 121 DKHPELLNEIR 131 >UniRef50_Q2Y6W9 Transcriptional regulator, XRE family n=2 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y6W9_NITMU Length = 157 Score = 134 bits (338), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 67/135 (49%), Positives = 90/135 (66%), Gaps = 6/135 (4%) Query: 1 MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKE-ESDAFMAQVKA 59 M+C +C +GE+V+G +D+P+T++G+KT +K I G YC C E E + D MA + Sbjct: 1 MRCSLCGKGEVVAGTRDVPFTYKGQKTFIKNIRGEYCNRCGEGYYGPEHDGDILMAGYRE 60 Query: 60 FRASVNAETVAPE---FIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKL 116 FR V+ TV E F+ +VRKKL L Q+EA EIFGGGVNAFSRYE G + S ++L Sbjct: 61 FREKVD--TVLAEQATFVEQVRKKLGLDQREAGEIFGGGVNAFSRYETGKVRTPVSVMQL 118 Query: 117 LRVLDKHPELLNEIR 131 +LD+HPELL EIR Sbjct: 119 FTLLDRHPELLEEIR 133 >UniRef50_C6P435 Transcriptional regulator, XRE family n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P435_9PROT Length = 132 Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 51/128 (39%), Positives = 78/128 (60%), Gaps = 2/128 (1%) Query: 3 CPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRA 62 C C +G+MV KD +RG + +++ + G +C C E +E + ++ R Sbjct: 5 CLNCEKGDMVRTKKDSEIEYRGHRAIVRALDGWHCPECGEVEFAGKEGVRYAEALEKLRL 64 Query: 63 SVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 ++AE A + ++RKKL L+Q+ A+ I GGGVNAFSRYE G A+P + + L R+L+K Sbjct: 65 KIDAEESAE--LARIRKKLKLSQRRAAAIAGGGVNAFSRYENGKARPVAAVVNLFRLLEK 122 Query: 123 HPELLNEI 130 HPELL+EI Sbjct: 123 HPELLDEI 130 >UniRef50_B9W0T3 Transcriptional regulator n=2 Tax=Shewanella RepID=B9W0T3_9GAMM Length = 135 Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 52/128 (40%), Positives = 77/128 (60%), Gaps = 2/128 (1%) Query: 3 CPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRA 62 CP C +G + KD Y ++G T+L G+YC CEE+I+ A ++ FRA Sbjct: 9 CPFCGEGHLNLSTKDKEYNYQGH-TLLIPQPGIYCDVCEEAILEPSHLKATRVDLQEFRA 67 Query: 63 SVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 ++ V P I K+RK++ L Q+EA+ + GGG NAFSRYE+G P + +LL++ DK Sbjct: 68 RIDG-IVGPRAIRKIRKQIGLNQQEAALLLGGGKNAFSRYEQGELSPPKAVSQLLKLFDK 126 Query: 123 HPELLNEI 130 HPEL+ E+ Sbjct: 127 HPELVKEL 134 >UniRef50_A5GA93 Helix-turn-helix domain protein n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5GA93_GEOUR Length = 140 Score = 101 bits (252), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 53/130 (40%), Positives = 79/130 (60%), Gaps = 5/130 (3%) Query: 3 CPVCHQGEMVSGIKDIPYTFRGRKTVLK-GIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 CP C QG + +K + +R +L+ G +C C E I+ +E+ A + + F Sbjct: 10 CPACFQGTLEHRVKRTQFEYR--SNILEYDQEGAWCGTCGEGIVTGKEAAAAESLLDDFI 67 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 A V+ E + + ++RKKL L QKEA+ I GGG NAFSRYE+G A+P + + L R+LD Sbjct: 68 ARVDKEEASE--LARIRKKLGLNQKEAAMIAGGGHNAFSRYERGEARPVAAVVNLFRLLD 125 Query: 122 KHPELLNEIR 131 +HPELLNE++ Sbjct: 126 RHPELLNELK 135 >UniRef50_C7RJM0 Transcriptional regulator, XRE family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RJM0_9PROT Length = 136 Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 51/130 (39%), Positives = 72/130 (55%), Gaps = 3/130 (2%) Query: 3 CPVCHQGEMVS-GIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 C C G ++ G +D+ T G + + G +C C + E F A + A R Sbjct: 7 CLQCDDGSVLQHGAQDMMITIDGMSQTVPAVVGWHCPTCGTCEFDDGEGKRFSATLAALR 66 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 NA+ A + +RKKL L Q +A +FGGG +AFS YE+G QPH ST+ LL++LD Sbjct: 67 QLANAQRAAS--LRAIRKKLGLRQADAGRLFGGGASAFSEYERGKTQPHKSTVLLLKLLD 124 Query: 122 KHPELLNEIR 131 +HPELL E+R Sbjct: 125 RHPELLEELR 134 >UniRef50_C6MW82 Transcriptional regulator, XRE family n=1 Tax=Geobacter sp. M18 RepID=C6MW82_9DELT Length = 154 Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 48/135 (35%), Positives = 81/135 (60%), Gaps = 11/135 (8%) Query: 1 MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEE----SDAFMAQ 56 M+CP C Q EMV+ ++D T+ G+ L + G +C C+E I + + ++A A Sbjct: 1 MRCPACGQ-EMVAEVRDETLTYGGQSLTLHAMQGEFCTGCDEGIWDAQSYRRYTEAQSAL 59 Query: 57 VKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKL 116 V+ + ++++ I ++RK L LTQ E ++ FG G AFSRYE+G +P +KL Sbjct: 60 VRTVKGDISSD------IRRIRKNLKLTQTELADAFGVGKVAFSRYERGETRPPAPLVKL 113 Query: 117 LRVLDKHPELLNEIR 131 L+++++HPELL E++ Sbjct: 114 LKLIERHPELLKEMQ 128 >UniRef50_B8GT54 Transcriptional regulator, XRE family n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GT54_THISH Length = 132 Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 48/125 (38%), Positives = 73/125 (58%), Gaps = 1/125 (0%) Query: 6 CHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRASVN 65 C G M I+D+ G + GI G++C C+E +S A A+V + Sbjct: 3 CETGSMTEDIRDVVVELDGLSRTVPGIRGMFCDTCKEIEFCDGDSAARYAEVMDALIAER 62 Query: 66 AETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPE 125 +A E + +RKKL LTQ++AS IFGGG+NAFSRYE+G +P + + LL V+++HPE Sbjct: 63 KTALALE-VRNLRKKLKLTQRQASMIFGGGINAFSRYERGVTEPSRAVMTLLHVMERHPE 121 Query: 126 LLNEI 130 + +E+ Sbjct: 122 IRDEL 126 >UniRef50_C6N7W9 Transcriptional regulator n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N7W9_9GAMM Length = 147 Score = 88.2 bits (217), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 46/129 (35%), Positives = 77/129 (59%), Gaps = 4/129 (3%) Query: 3 CPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRA 62 CP+C + + Y ++G + L+C C E +++ E++ A +++ R+ Sbjct: 6 CPICGELAASHEERSTTYHYKGHAFCIMQ-PALWCDSCGEGVISPEDNKATALEIQGHRS 64 Query: 63 SVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKG-NAQPHPSTIKLLRVLD 121 ++ + P I K+RK L+L QK+AS +FGGG+N+F+RYE+G N P P ++ LL +LD Sbjct: 65 RIDG-ILTPNEIAKIRKHLNLNQKDASRLFGGGINSFNRYERGTNPIPKPLSM-LLVLLD 122 Query: 122 KHPELLNEI 130 KHPE L E+ Sbjct: 123 KHPEQLQEL 131 >UniRef50_Q58KB7 ORF170 n=2 Tax=Bacteria RepID=Q58KB7_9BACT Length = 170 Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 42/119 (35%), Positives = 63/119 (52%) Query: 1 MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAF 60 MKCP C E++ +D+P ++G T++ + G +C CEE I+N+E + + F Sbjct: 1 MKCPCCGAAELIHDTRDMPTLYKGENTMIPAVTGDFCPACEEVILNREHGARYSELIGQF 60 Query: 61 RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRV 119 VNA V P +I KVRKKL L Q++A+E FGG + S + P + L V Sbjct: 61 HRQVNAAYVDPGYIAKVRKKLDLDQRQAAEDFGGLASMPSHATRTARPSRPCCSRCLNV 119 >UniRef50_A7BW93 Transcriptional regulator, XRE family n=1 Tax=Beggiatoa sp. PS RepID=A7BW93_9GAMM Length = 139 Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 74/129 (57%), Gaps = 2/129 (1%) Query: 2 KCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 +CP+C G + YT++G ++ G +C C+E I+N + +A Q++ F+ Sbjct: 4 ECPLCKTGFLERKTIKEMYTYKGHSIEIEQ-PGEFCNVCDEGILNSTDLNATEKQIRDFQ 62 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 + ++ A E I KVR+KL L+Q EA+EI G N FSRYE+G P S LL +L+ Sbjct: 63 SKIDGLLTASE-IRKVRQKLKLSQFEAAEICGNDPNTFSRYERGEEIPQRSISNLLMILN 121 Query: 122 KHPELLNEI 130 HPELL E+ Sbjct: 122 NHPELLLEL 130 >UniRef50_A4U5T1 Transcriptional regulator, XRE family n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U5T1_9PROT Length = 136 Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 47/132 (35%), Positives = 74/132 (56%), Gaps = 5/132 (3%) Query: 1 MKCPVCHQ--GEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVK 58 M CH+ EMV I+ + +T++G ++ G YC C E ++ E+S A+ Sbjct: 1 MTMATCHECGAEMVRDIRPMEFTYKGHTLTVQQ-PGWYCA-CGEGVLTPEDSAVTQAEYV 58 Query: 59 AFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLR 118 AFR V+ + P + ++RK+L L QK+A + GGG +AF +YE+ + +P + LLR Sbjct: 59 AFRDQVDG-ILPPAEVRRIRKRLGLQQKQAGVVLGGGASAFGKYERKDGKPSLAMSNLLR 117 Query: 119 VLDKHPELLNEI 130 +LDK P L EI Sbjct: 118 LLDKDPSRLQEI 129 >UniRef50_A1BG77 Transcriptional regulator, XRE family n=7 Tax=Chlorobiaceae RepID=A1BG77_CHLPD Length = 136 Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 2/129 (1%) Query: 2 KCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 +CP C M+ + + T+ G+ L +HG +C C E I ++E + + Sbjct: 7 QCPSCGHKGMIDKVLEETLTYGGKSMTLHDMHGRFCPECGEGIWDEESCRRYTEAQEGLV 66 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 ++ + A I ++R+KL LTQ + + FG G AFSRYE+G +P +KLL+++D Sbjct: 67 RAIKGDPAAD--IRRIRRKLKLTQAQLASSFGVGKVAFSRYERGETRPPAPLLKLLKLID 124 Query: 122 KHPELLNEI 130 +HP+LLNEI Sbjct: 125 RHPDLLNEI 133 >UniRef50_Q1IJ02 Transcriptional regulator, XRE family n=2 Tax=Bacteria RepID=Q1IJ02_ACIBL Length = 155 Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 4/132 (3%) Query: 2 KCPVCHQGEMVSGIKDIPYTFR--GRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKA 59 KC C +++ +T + T + G+ G CV C E + + + A A Sbjct: 4 KCVSCASAKVMVPFSSETFTIKYGAATTKISGLSGWKCVACGEVEFDARSAKRYAAAGDA 63 Query: 60 FRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRV 119 + E + E + ++R+KL LTQ A+ + GGG NAFSRYE+G P S + L R+ Sbjct: 64 LVIAQRKE-LGTE-LRRIRRKLGLTQASAARLTGGGHNAFSRYERGEVIPMSSVVNLFRL 121 Query: 120 LDKHPELLNEIR 131 LDKHPELL +++ Sbjct: 122 LDKHPELLKDLK 133 >UniRef50_Q07J16 Transcriptional regulator, XRE family n=2 Tax=Proteobacteria RepID=Q07J16_RHOP5 Length = 134 Score = 78.6 bits (192), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 48/132 (36%), Positives = 71/132 (53%), Gaps = 7/132 (5%) Query: 3 CPVCHQG--EMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAF 60 PVC + MV + + T++G+ + + G YC ESI D +A Sbjct: 4 APVCPETGLPMVRDTRPMTITYKGQSATI-AMPGWYCDESGESIHT---GDDMQVSDEAL 59 Query: 61 RASVN-AETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRV 119 R N A+ + I ++RKK+ LTQ+EA IFGGG NAF +YE+G+ + LLRV Sbjct: 60 RDLKNKADILDGAEIRRIRKKIGLTQREAGAIFGGGPNAFQKYEQGSVTVSKAMSNLLRV 119 Query: 120 LDKHPELLNEIR 131 L+KHPE + E++ Sbjct: 120 LEKHPEEVEELK 131 >UniRef50_C4XJ50 Xre family DNA-binding protein n=3 Tax=Desulfovibrio RepID=C4XJ50_DESMR Length = 135 Score = 78.2 bits (191), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 41/129 (31%), Positives = 71/129 (55%), Gaps = 4/129 (3%) Query: 5 VCHQG--EMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRA 62 +CH+ EMV ++ + ++++G +T+ + G YC C E + + + + A +A Sbjct: 1 MCHEDGIEMVRDVRPVEFSYKG-QTMTVAMPGWYCPKCGEGLYTRADMKVSDRALNAMKA 59 Query: 63 SVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 P+ + ++RKKL LTQ A ++ GGG AF++YEKG+A + LL+VLD Sbjct: 60 RCEGLLDGPQ-VKRIRKKLGLTQAAAGDLIGGGPKAFTKYEKGDALTSRAVTNLLKVLDA 118 Query: 123 HPELLNEIR 131 P+ L +R Sbjct: 119 VPDALTILR 127 >UniRef50_Q1QEY5 Transcriptional regulator, XRE family n=1 Tax=Nitrobacter hamburgensis X14 RepID=Q1QEY5_NITHX Length = 142 Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 38/118 (32%), Positives = 69/118 (58%), Gaps = 2/118 (1%) Query: 14 GIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRASVNAETVAPEF 73 G++ + T++G K++ + G Y + ++ I ++ A ++ + + +P Sbjct: 24 GVRPLIVTYKG-KSITVELPGYYPDNGDDGIHVGDDMAITDAALRILKEEIEG-IPSPAT 81 Query: 74 IVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEIR 131 I +VR+KL L+Q+EA + G NAF +YE+G +P T +LLR+LD+HPELL ++R Sbjct: 82 IRRVREKLKLSQREAGGLLKVGENAFDKYERGLVEPSGPTSQLLRLLDQHPELLEDLR 139 >UniRef50_C0GU77 Transcriptional regulator with HTH domain protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GU77_9DELT Length = 167 Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 1/130 (0%) Query: 1 MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAF 60 M CPVC +G + +K + ++G+ ++ L C CEE ++ E+S F ++ AF Sbjct: 7 MSCPVCGKGYIQRHLKREEFEYKGQAKIIDDYPLLICDACEEEFVSAEDSRLFDKELTAF 66 Query: 61 RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVL 120 + V+ + P+ I +R+KL Q + + G F+RYE G + L+R+L Sbjct: 67 QRKVDG-LLTPDEIRSIREKLGYNQTSFARLLKVGEKNFARYETGVSPQSRYLDWLMRIL 125 Query: 121 DKHPELLNEI 130 + +PE + I Sbjct: 126 NDYPETIKTI 135 >UniRef50_A7BUF7 Transcriptional regulator, Cro/CI family n=1 Tax=Beggiatoa sp. PS RepID=A7BUF7_9GAMM Length = 140 Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 67/130 (51%), Gaps = 1/130 (0%) Query: 2 KCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 +CP+C +++ Y ++G L I C C ++ +S A+++ Sbjct: 7 RCPMCESADLIPKKIIEHYCYKGHDFSLADIEYAECPKCHSEVITPGQSTRNEARIRDEH 66 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 ++ E I+++R++L +TQ +A++IFG VNAFS+YE G A + + KL+++ Sbjct: 67 RKIDGLFTRAE-IIQLREQLKITQNQAAQIFGEHVNAFSKYESGEATQNKAMDKLMKLAL 125 Query: 122 KHPELLNEIR 131 P+ E+R Sbjct: 126 NMPQCFEELR 135 >UniRef50_Q2LYD1 Transcriptional regulator with HTH domain n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LYD1_SYNAS Length = 182 Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 1/130 (0%) Query: 2 KCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 KC +C + + + ++G+K + C C E+I++ +K F+ Sbjct: 12 KCSICGAESLTRKVGTESFEYKGKKKEIPNYVTYECSECGEAIVDSATLKESGKILKDFQ 71 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 V+ P+ I +R KL LTQ++ + I GGG+ + +RYE G LLR+LD Sbjct: 72 REVDGLLTGPQ-IKAIRIKLGLTQEQLANIIGGGLKSVARYESGQVCQSKGMDNLLRILD 130 Query: 122 KHPELLNEIR 131 +P+ L I+ Sbjct: 131 AYPQTLKIIQ 140 >UniRef50_A7BYA6 Transcriptional regulator protein n=1 Tax=Beggiatoa sp. PS RepID=A7BYA6_9GAMM Length = 179 Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/94 (35%), Positives = 55/94 (58%), Gaps = 1/94 (1%) Query: 37 CVHCEESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGV 96 C C ++K++ A+++ + S++ + E I RKKL LTQ++AS++FGGG Sbjct: 37 CNRCGREFISKQQIINNDARMRDAKRSLDGLMTSSE-IYDARKKLGLTQEQASKVFGGGK 95 Query: 97 NAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEI 130 NAFS+YE+ + KL+R+ KHP + E+ Sbjct: 96 NAFSKYERSEVSQSVAMDKLIRICLKHPNVFREM 129 >UniRef50_C3K4N6 Putative uncharacterized protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K4N6_PSEFS Length = 163 Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 37/117 (31%), Positives = 60/117 (51%), Gaps = 11/117 (9%) Query: 21 TFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRASVNAETVAPEFIV----- 75 + +G + + G C C + + + + A+ +A T+A ++ Sbjct: 26 SIKGMDRRVDELSGWECKVCGDGFWDPDND-----STDRYDAAKDALTLAARKMIGTEMK 80 Query: 76 KVRKKLSLTQKEASEIF-GGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEIR 131 + R+KL LTQKEA E+ GGG NAFSRYE+G + L+R+LD+HP LL + + Sbjct: 81 RTRRKLHLTQKEAVELLSGGGHNAFSRYERGELLAPKPLVLLMRLLDRHPHLLADAK 137 >UniRef50_A5G9X9 Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G9X9_GEOUR Length = 168 Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 2/129 (1%) Query: 2 KCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 +CP+C G++ +T++G++ G C C E + K+ A +++ F Sbjct: 10 QCPLCI-GKLKETSVTEKFTYKGKELEYPGYIVHECDRCGEQFVGKKTMKASAKRLRDFY 68 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 V+ + + I ++R KL L Q ASE+ GGG +F+RYE + + LLRVL Sbjct: 69 REVDGLLTSCQ-IKEIRLKLGLNQGAASELLGGGAKSFARYENCDVIQSEAMDNLLRVLK 127 Query: 122 KHPELLNEI 130 P+LL I Sbjct: 128 DSPDLLKVI 136 >UniRef50_Q4KHV0 Putative uncharacterized protein n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KHV0_PSEF5 Length = 160 Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 39/116 (33%), Positives = 65/116 (56%), Gaps = 13/116 (11%) Query: 21 TFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQ----VKAFRASVNAETVAPEFIVK 76 +R + L G+ G C C E + ++ + A ++ +R V A+ + + Sbjct: 26 DYRHLQRHLHGLAGWECQECGEIEFDAASAERYAAAGDQLLEDYRQIVAAD------MKR 79 Query: 77 VRKKLSLTQKEASEIF-GGGVNAFSRYEKGN-AQPHPSTIKLLRVLDKHPELLNEI 130 +R+KL L+QKEA + GGG NAFSRYE+G P P + L+R+LD+HP+L+ ++ Sbjct: 80 IRRKLHLSQKEAVRLLSGGGHNAFSRYERGEVGAPQPLYM-LMRLLDRHPQLMKDV 134 >UniRef50_Q1N9W5 Transcriptional regulator, XRE family protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N9W5_9SPHN Length = 137 Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 7/101 (6%) Query: 32 IHGLYCVHCEESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRK-KLSLTQKEASE 90 + G Y +SI + E+ +AFR + + + ++RK KL LTQ+EA Sbjct: 34 VPGWYPDDESDSIHSGED---LAESDRAFR---DLKAAYGAHVRRIRKDKLKLTQEEAGR 87 Query: 91 IFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEIR 131 + GGG AF +YE G+ P + + L+ +LD+HPE + +R Sbjct: 88 LIGGGRRAFQKYESGSTPPSDAAVGLIELLDRHPEEVEFLR 128 >UniRef50_C9KLV8 Toxin-antitoxin system, antitoxin component, Xre family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KLV8_9FIRM Length = 134 Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 2/121 (1%) Query: 10 EMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRASVNAETV 69 E+V ++ + ++ G + + G Y +E ++ + + +A + + Sbjct: 15 ELVRDVRPMTISYAGHQMTF-SMPGWYPKDNDEGTFTDDDMKVYDKALNQLKAE-SEHLL 72 Query: 70 APEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNE 129 P I +RKKL LTQ +A I GGG AF +YE P + LLRVL P LL Sbjct: 73 KPMEIRAIRKKLKLTQVQAGTILGGGKKAFQKYESDEILPSRAISNLLRVLAVQPSLLQT 132 Query: 130 I 130 I Sbjct: 133 I 133 >UniRef50_UPI0001907A5F XRE family transcriptional regulator n=1 Tax=Rhizobium etli GR56 RepID=UPI0001907A5F Length = 79 Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 1/55 (1%) Query: 77 VRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEIR 131 VR S+ K + + GGG NAFSRYE G P P+ + L R+LD+HP+ + E+R Sbjct: 24 VRNSASIRLKHRA-LTGGGHNAFSRYETGKVSPPPAVVNLFRMLDRHPDDIKELR 77 >UniRef50_Q0A690 Putative uncharacterized protein n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A690_ALHEH Length = 204 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 35/126 (27%), Positives = 53/126 (42%), Gaps = 2/126 (1%) Query: 3 CPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRA 62 CP C +G + G + +H C C + E+ A + AFR Sbjct: 12 CPACGEGRLEPRQTTQRAEHAGLSEAIP-LHYAVCDTCGSELAEAPEAKANKRAMTAFRK 70 Query: 63 SVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 + + + + RK L LTQ +A+++FGGG AFSRYE + + L+RV Sbjct: 71 RADGLLTGAQ-MRQARKALGLTQAQAAKLFGGGQVAFSRYENDDITQSEAMDSLVRVCLA 129 Query: 123 HPELLN 128 P L Sbjct: 130 QPANLT 135 >UniRef50_C5V7T9 Putative uncharacterized protein n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V7T9_9PROT Length = 188 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 12/127 (9%) Query: 3 CPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVK---- 58 C +C +G + + ++ P ++G L +YC C S+ E++ A + Sbjct: 8 CQICGEGHLSALVEINPVEYKGVSKELD----MYCSIC--SVCGSEQASANDVRTNKRAM 61 Query: 59 -AFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLL 117 AF+ V+ + + +R K + Q AS IFGGG AFS+YE + + KLL Sbjct: 62 MAFKKEVDGLLTGVQ-VRALRDKFGINQTYASLIFGGGPVAFSKYESDDVAQSEAMDKLL 120 Query: 118 RVLDKHP 124 R+ D P Sbjct: 121 RLADAVP 127 >UniRef50_C9P136 Putative uncharacterized protein n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P136_VIBME Length = 178 Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 16/135 (11%) Query: 3 CPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHC-------EESIMNKEESDAFMA 55 CP+C QG + + + I G++ + C C E + NK AF Sbjct: 6 CPICEQGRLSNQEEIIHVEHMGQQGSISSQFST-CDVCGSEQATPENARFNKRAMIAFKK 64 Query: 56 QVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIK 115 QV+ + + ++RK + +Q++A++IFGGG AFS+YE + + + Sbjct: 65 QVQGLLTGME--------VRELRKDWNFSQEDAAKIFGGGPVAFSKYESDDVMQSEAMDR 116 Query: 116 LLRVLDKHPELLNEI 130 L+R+ P L+++ Sbjct: 117 LIRIARDVPASLDKL 131 >UniRef50_Q1YRR7 Helix-turn-helix motif protein n=2 Tax=gamma proteobacterium HTCC2207 RepID=Q1YRR7_9GAMM Length = 93 Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 5/91 (5%) Query: 45 MNKEESDAFMA---QVKAFRASVNAETVAPE--FIVKVRKKLSLTQKEASEIFGGGVNAF 99 M K+ SDA A V A + A+ PE ++ VRK+L +Q +++ G V Sbjct: 1 MAKKMSDAGQALSDDVLGINAGMPAKIWFPEQLLVIAVRKQLQKSQPGFAKLLGIPVGTL 60 Query: 100 SRYEKGNAQPHPSTIKLLRVLDKHPELLNEI 130 +E+G QP + + L++V HPE+L + Sbjct: 61 RDWEQGRKQPDSAAVTLIKVAQSHPEVLANL 91 >UniRef50_A3TSK6 Putative uncharacterized protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TSK6_9RHOB Length = 76 Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 3/54 (5%) Query: 81 LSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHP---ELLNEIR 131 + LTQ EA I GGG AF +YEKG P + + LL +L P E+L +R Sbjct: 1 MRLTQSEAGNIVGGGPRAFQKYEKGVMPPSDAAVGLLEILKDDPGKIEILKRLR 54 >UniRef50_D0SHI7 Transcriptional regulator n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SHI7_ACIJO Length = 193 Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 33/54 (61%) Query: 74 IVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELL 127 I ++R+ L L+Q EAS IFGGG AFS+YE + S L+ ++ P+LL Sbjct: 75 IKEIREGLRLSQTEASAIFGGGKVAFSKYENDDVIQSKSMNTLIGAANRIPDLL 128 >UniRef50_C8PU52 Transcriptional regulator, XRE family n=2 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PU52_9GAMM Length = 110 Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 35/57 (61%) Query: 74 IVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEI 130 + +VR+K L+Q + ++ G VN +E+G +P S LL++L K PEL++EI Sbjct: 50 VSQVRQKTGLSQSQFAKSLGISVNTLKSWEQGQRKPSGSAQVLLKLLGKKPELIDEI 106 >UniRef50_A4XM96 Helix-turn-helix domain protein n=2 Tax=Clostridia RepID=A4XM96_CALS8 Length = 341 Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/118 (24%), Positives = 59/118 (50%), Gaps = 6/118 (5%) Query: 3 CPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKE-ESDAFMAQVKAFR 61 CP C + + K++ ++G + ++ H +C C+ ++ + E++ + +R Sbjct: 7 CPECKKHVEIKVEKNLVKEYKGVQVNVEE-HAPHCSECDTELLVPDIENENLKRLYQRYR 65 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGN--AQPHPSTIKLL 117 + PE I K+R+K L+Q+E +I G G +RYE+G ++ H +KL+ Sbjct: 66 ELTGL--ITPEEIQKIREKYGLSQRELGQILGWGKMTINRYERGALPSKSHSDILKLI 121 >UniRef50_A2RP91 Predicted helix-turn-helix containing protein n=4 Tax=Enterobacteriaceae RepID=A2RP91_SALTI Length = 96 Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 33/55 (60%) Query: 77 VRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEIR 131 +R K L Q E +++ G + +E+ P S++KLLRV++KHP++LN R Sbjct: 40 IRTKAKLKQNEFAQVVGVSPSLVQAWEQQKRTPTGSSLKLLRVIEKHPDMLNLFR 94 >UniRef50_A4E6W9 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6W9_9ACTN Length = 167 Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 2/105 (1%) Query: 22 FRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKL 81 +RG K +KGI C C M E+ +A A + + E ++P I +R L Sbjct: 18 YRGEKITVKGIEHYVC-ECGNDEMTTTEATK-LAHALASQYAKAHELLSPSDIKDLRSDL 75 Query: 82 SLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPEL 126 LTQ E + G SR+E G +Q + L++++ PE+ Sbjct: 76 GLTQHEFESLLGVSKPTASRWENGASQQSITANNLMKLIRDVPEV 120 >UniRef50_A7HUI5 Helix-turn-helix domain protein n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HUI5_PARL1 Length = 102 Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust. Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 3/90 (3%) Query: 40 CEESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAF 99 +E I + EE+ + + + V TVAP + K RK L +TQ + + + G V+ Sbjct: 5 AKELISSMEEA---LEHARGGKTGVRVHTVAPVDVKKARKALKMTQPDFARLVGTSVSGL 61 Query: 100 SRYEKGNAQPHPSTIKLLRVLDKHPELLNE 129 ++E+G QP + L+ ++ + PE + + Sbjct: 62 QKWEQGKRQPGGAARTLITLIMRAPEAVRD 91 >UniRef50_B6IPE3 DNA-binding protein, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6IPE3_RHOCS Length = 110 Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 1/81 (1%) Query: 48 EESDAFMAQVKAFRASVNAETVAPEFIVK-VRKKLSLTQKEASEIFGGGVNAFSRYEKGN 106 E++ A + ++ + T P V+ VR++L LTQ+E + FG + +E+ Sbjct: 19 EDAAALVDSLRGLGVAAVRRTAPPAPDVRRVRERLGLTQREFAATFGIELGTLRNWEQNR 78 Query: 107 AQPHPSTIKLLRVLDKHPELL 127 P LLRVL++HPE++ Sbjct: 79 NPPDAPGRLLLRVLERHPEIV 99 >UniRef50_A1U7F0 Virulence gene repressor RsaL n=4 Tax=Proteobacteria RepID=A1U7F0_MARAV Length = 95 Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust. Identities = 17/54 (31%), Positives = 32/54 (59%) Query: 77 VRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEI 130 +R KL+++Q + + G V +E+G +P + LLR+ ++HPE+ NE+ Sbjct: 41 IRLKLNMSQSAFAGLMGVSVRTLQDWEQGRREPQGPAVALLRIAEQHPEVFNEL 94 >UniRef50_B2UKR2 Transcriptional regulator, XRE family n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UKR2_AKKM8 Length = 147 Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust. Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 5/69 (7%) Query: 60 FRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRV 119 FR + N +++A ++RK ++QK+ + + G + ++E G +P + KLL + Sbjct: 83 FRETGNEKSIA-----RLRKSQGMSQKDFAAVLGVSPSTLVKWEHGLRRPCGPSAKLLDL 137 Query: 120 LDKHPELLN 128 ++KHPEL+N Sbjct: 138 IEKHPELIN 146 >UniRef50_C3JZL6 Putative uncharacterized protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3JZL6_PSEFS Length = 260 Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust. Identities = 19/44 (43%), Positives = 29/44 (65%) Query: 76 KVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRV 119 + R KL LTQ EA++IFGGG N+F++YE + + L+R+ Sbjct: 89 EARTKLGLTQVEAAKIFGGGKNSFAKYEADDVTQSEAMDNLVRL 132 >UniRef50_C6HUS9 Helix-turn-helix domain protein n=2 Tax=Leptospirillum RepID=C6HUS9_9BACT Length = 102 Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 31/54 (57%) Query: 76 KVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNE 129 +VR+ L+Q E +EI G V +E+G +P + LL++ +K+P LL E Sbjct: 45 RVRQATGLSQVEFAEILGVSVRTLQDWEQGRRKPSGAAATLLKIAEKNPALLRE 98 >UniRef50_C5CDA8 Transcriptional regulator, XRE family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CDA8_KOSOT Length = 331 Score = 40.4 bits (93), Expect = 0.016, Method: Compositional matrix adjust. Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 6/123 (4%) Query: 1 MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAF 60 MKCP C + I++ +F+GR+ L + C CE+S ++ + +V Sbjct: 1 MKCPKCGRELYKKQIRE-KQSFKGREVEL-SYNVFVCPQCEDSFVDSASLEQAWKKVWDD 58 Query: 61 RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVL 120 N +PE + + R KL LT +E S+I G + S+ E G+ + S LL++ Sbjct: 59 YEKEN-HIPSPETLREARMKLKLTAEELSKIIGRTKSLISKLENGSRRLSES---LLKIY 114 Query: 121 DKH 123 + H Sbjct: 115 ENH 117 >UniRef50_A6Q854 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q854_SULNB Length = 109 Score = 40.4 bits (93), Expect = 0.017, Method: Compositional matrix adjust. Identities = 18/52 (34%), Positives = 32/52 (61%) Query: 77 VRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLN 128 +RK L L+Q +++ +++ ++E+G P ST+ LL +L + PELLN Sbjct: 50 IRKSLKLSQSVFAKLLNVSLSSVRQWEQGIRTPSGSTMVLLELLQREPELLN 101 >UniRef50_A4J0H7 Putative uncharacterized protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J0H7_DESRM Length = 334 Score = 40.0 bits (92), Expect = 0.026, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 9/107 (8%) Query: 3 CPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHG--LYCVHCEESIMNKEESDAFMAQVKAF 60 C C + E++ K+ + + R V K I+G L+C C + ++E +A Q AF Sbjct: 6 CGNCEK-EVLGITKEDYFEYPVRNLVYK-INGKRLFCPDCGNELFHREYDEA--NQRAAF 61 Query: 61 RASVNAET--VAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKG 105 ET ++P+ I +R+K LTQ+E S + G G SRYE+G Sbjct: 62 DL-YRKETGIISPKEIKDIREKYELTQREFSYLLGFGEITVSRYERG 107 >UniRef50_Q2RPT5 Transcriptional regulator, XRE family n=3 Tax=Alphaproteobacteria RepID=Q2RPT5_RHORT Length = 98 Score = 39.7 bits (91), Expect = 0.030, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 31/56 (55%) Query: 70 APEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPE 125 AP + +R KL +TQ++ + FG VN +E+G QP + L V+D+ P+ Sbjct: 34 APIDVRAIRAKLGMTQEQFAGRFGFSVNTLRHWEQGKRQPEGPSRAYLLVIDRAPD 89 >UniRef50_P11408 Modification methylase MspI n=3 Tax=Proteobacteria RepID=MTM1_MORSP Length = 418 Score = 39.7 bits (91), Expect = 0.030, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 27/48 (56%) Query: 71 PEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLR 118 PE + +R KL LTQK+ASEI + ++E G + HP+ L+ Sbjct: 3 PEILKLIRSKLDLTQKQASEIIEVSDKTWQQWESGKTEMHPAYYSFLQ 50 >UniRef50_UPI0001AF457D hypothetical protein Psyrpo1_28742 n=1 Tax=Pseudomonas syringae pv. oryzae str. 1_6 RepID=UPI0001AF457D Length = 239 Score = 38.9 bits (89), Expect = 0.048, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 12/133 (9%) Query: 2 KCPVCHQGEMVSGIKDIPYTFRGRK----TVLKGIHGLYCVHCEESIMNKE---ESDAFM 54 +CP+C ++ ++ + Y F R +V + C C E + E ++ A + Sbjct: 4 QCPICAS---LNALQRVKYIFIARPMPGHSVELELPAFECCVCGEQVETPELVVQNSAMI 60 Query: 55 AQVK-AFRASVNAETVAPEFIVK-VRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPS 112 ++ K A+ A + A ++VK +R ++QKE S + G N+ S+YE + P Sbjct: 61 SEAKLAWLADHESSDRAIGYLVKELRNNFGVSQKEFSIMTGATGNSISKYESHSIVPSAL 120 Query: 113 TIKLLRVLDKHPE 125 KL VL K E Sbjct: 121 ARKLFTVLAKSKE 133 >UniRef50_C4Z706 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=C4Z706_EUBE2 Length = 178 Score = 38.9 bits (89), Expect = 0.054, Method: Compositional matrix adjust. Identities = 19/64 (29%), Positives = 35/64 (54%) Query: 67 ETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPEL 126 + + E I +RK L LTQKE + + G R+EK NA+ + L ++++ +P+ Sbjct: 6 DYITSEDIKNLRKNLGLTQKEFASLVGTSKPTIERWEKENAKITGPIVLLSKMINDYPDY 65 Query: 127 LNEI 130 +N + Sbjct: 66 VNRL 69 >UniRef50_A8GWH9 Putative transcriptional regulator n=2 Tax=Rickettsia bellii RepID=A8GWH9_RICB8 Length = 97 Score = 38.5 bits (88), Expect = 0.059, Method: Compositional matrix adjust. Identities = 17/54 (31%), Positives = 29/54 (53%) Query: 74 IVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELL 127 I+ +RK L L+Q + + + V +E+G +P I LL++ KHPE+ Sbjct: 39 IIDIRKHLHLSQVDFAALMHINVRTLQEWEQGRRRPRGPAISLLKIASKHPEIF 92 >UniRef50_Q9KMA5 Antitoxin higA-2 n=32 Tax=Proteobacteria RepID=HIGA2_VIBCH Length = 104 Score = 38.1 bits (87), Expect = 0.077, Method: Compositional matrix adjust. Identities = 14/62 (22%), Positives = 36/62 (58%) Query: 69 VAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLN 128 ++P+ IV +R++ ++++ + + +E+G + P+ + LL+++ +HPE L+ Sbjct: 40 ISPDEIVSIREQFNMSRGVFARLLHTSSRTLENWEQGRSVPNGQAVTLLKLVQRHPETLS 99 Query: 129 EI 130 I Sbjct: 100 HI 101 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q46864 Uncharacterized HTH-type transcriptional regulat... 184 7e-46 UniRef50_B9W0T3 Transcriptional regulator n=2 Tax=Shewanella Rep... 160 1e-38 UniRef50_C0GU77 Transcriptional regulator with HTH domain protei... 159 3e-38 UniRef50_Q2Y6W9 Transcriptional regulator, XRE family n=2 Tax=Ni... 159 3e-38 UniRef50_Q07J16 Transcriptional regulator, XRE family n=2 Tax=Pr... 158 6e-38 UniRef50_A7BW93 Transcriptional regulator, XRE family n=1 Tax=Be... 154 1e-36 UniRef50_C6P435 Transcriptional regulator, XRE family n=1 Tax=Si... 149 2e-35 UniRef50_C6N7W9 Transcriptional regulator n=1 Tax=Legionella dra... 149 3e-35 UniRef50_A4U5T1 Transcriptional regulator, XRE family n=1 Tax=Ma... 148 5e-35 UniRef50_C6MW82 Transcriptional regulator, XRE family n=1 Tax=Ge... 148 6e-35 UniRef50_C7RJM0 Transcriptional regulator, XRE family n=1 Tax=Ca... 146 2e-34 UniRef50_C4XJ50 Xre family DNA-binding protein n=3 Tax=Desulfovi... 146 3e-34 UniRef50_A5GA93 Helix-turn-helix domain protein n=1 Tax=Geobacte... 145 4e-34 UniRef50_Q2LYD1 Transcriptional regulator with HTH domain n=1 Ta... 144 9e-34 UniRef50_Q58KB7 ORF170 n=2 Tax=Bacteria RepID=Q58KB7_9BACT 144 1e-33 UniRef50_A7BUF7 Transcriptional regulator, Cro/CI family n=1 Tax... 140 1e-32 UniRef50_A1BG77 Transcriptional regulator, XRE family n=7 Tax=Ch... 139 3e-32 UniRef50_A5G9X9 Putative uncharacterized protein n=1 Tax=Geobact... 137 8e-32 UniRef50_Q1IJ02 Transcriptional regulator, XRE family n=2 Tax=Ba... 137 1e-31 UniRef50_C9KLV8 Toxin-antitoxin system, antitoxin component, Xre... 136 3e-31 UniRef50_Q1QEY5 Transcriptional regulator, XRE family n=1 Tax=Ni... 135 4e-31 UniRef50_B8GT54 Transcriptional regulator, XRE family n=1 Tax=Th... 131 5e-30 UniRef50_Q0A690 Putative uncharacterized protein n=1 Tax=Alkalil... 128 6e-29 UniRef50_C9P136 Putative uncharacterized protein n=1 Tax=Vibrio ... 127 1e-28 UniRef50_C5V7T9 Putative uncharacterized protein n=1 Tax=Gallion... 124 9e-28 UniRef50_A7BYA6 Transcriptional regulator protein n=1 Tax=Beggia... 123 2e-27 UniRef50_C3K4N6 Putative uncharacterized protein n=1 Tax=Pseudom... 119 3e-26 UniRef50_Q4KHV0 Putative uncharacterized protein n=1 Tax=Pseudom... 109 4e-23 UniRef50_Q1N9W5 Transcriptional regulator, XRE family protein n=... 109 4e-23 UniRef50_D0SHI7 Transcriptional regulator n=1 Tax=Acinetobacter ... 109 5e-23 UniRef50_A4XM96 Helix-turn-helix domain protein n=2 Tax=Clostrid... 103 2e-21 UniRef50_C8PU52 Transcriptional regulator, XRE family n=2 Tax=En... 79 6e-14 UniRef50_Q1YRR7 Helix-turn-helix motif protein n=2 Tax=gamma pro... 78 8e-14 UniRef50_UPI0001907A5F XRE family transcriptional regulator n=1 ... 73 4e-12 UniRef50_A2RP91 Predicted helix-turn-helix containing protein n=... 72 6e-12 UniRef50_A3TSK6 Putative uncharacterized protein n=1 Tax=Oceanic... 64 1e-09 Sequences not found previously or not previously below threshold: UniRef50_C3JZL6 Putative uncharacterized protein n=1 Tax=Pseudom... 112 5e-24 UniRef50_B2AJ70 Putative uncharacterized protein n=1 Tax=Cupriav... 102 4e-21 UniRef50_A4E6W9 Putative uncharacterized protein n=1 Tax=Collins... 81 9e-15 UniRef50_A0LH57 Transcriptional regulator, XRE family n=1 Tax=Sy... 77 2e-13 UniRef50_C6LB00 Toxin-antitoxin system, antitoxin component, Xre... 77 2e-13 UniRef50_A4J0H7 Putative uncharacterized protein n=1 Tax=Desulfo... 75 6e-13 UniRef50_A6TLM4 Putative uncharacterized protein n=1 Tax=Alkalip... 72 6e-12 UniRef50_C5CDA8 Transcriptional regulator, XRE family n=1 Tax=Ko... 72 8e-12 UniRef50_C6Q836 Transcriptional regulator, XRE family n=1 Tax=Th... 71 1e-11 UniRef50_A5G3N3 Putative uncharacterized protein n=1 Tax=Geobact... 70 3e-11 UniRef50_UPI0000382ADF COG2944: Predicted transcriptional regula... 69 5e-11 UniRef50_C2HQE2 Phage-like transcriptional regulator protein n=5... 68 7e-11 UniRef50_B0KAX5 Transcriptional regulator, XRE family n=5 Tax=Th... 67 2e-10 UniRef50_D2C8D5 Transcriptional regulator, XRE family n=1 Tax=Th... 67 2e-10 UniRef50_B6IPE3 DNA-binding protein, putative n=1 Tax=Rhodospiri... 67 2e-10 UniRef50_Q2L0I8 Putative DNA-binding protein n=2 Tax=Proteobacte... 67 2e-10 UniRef50_A6Q854 Putative uncharacterized protein n=1 Tax=Sulfuro... 66 3e-10 UniRef50_D2QQQ8 Transcriptional regulator, XRE family n=1 Tax=Sp... 66 3e-10 UniRef50_UPI0001AF457D hypothetical protein Psyrpo1_28742 n=1 Ta... 66 3e-10 UniRef50_A1U7F0 Virulence gene repressor RsaL n=4 Tax=Proteobact... 66 4e-10 UniRef50_Q39YW3 Transcriptional regulator, XRE family n=10 Tax=P... 65 5e-10 UniRef50_C0XBS2 Phage associated protein n=1 Tax=Lactobacillus g... 65 6e-10 UniRef50_C2D085 Transcriptional regulator phage-related n=1 Tax=... 65 8e-10 UniRef50_B8G1P7 Helix-turn-helix domain-containing protein n=2 T... 64 1e-09 UniRef50_A1BCL4 Helix-turn-helix domain protein n=2 Tax=Chlorobi... 64 2e-09 UniRef50_A5G7I8 Helix-turn-helix domain protein n=2 Tax=Proteoba... 64 2e-09 UniRef50_C6HUS9 Helix-turn-helix domain protein n=2 Tax=Leptospi... 64 2e-09 UniRef50_C8W2H4 Putative phage-associated protein n=1 Tax=Desulf... 63 3e-09 UniRef50_C0GQR0 Transcriptional regulator, XRE family n=1 Tax=De... 62 4e-09 UniRef50_C6VTF5 Helix-turn-helix domain-containing protein n=1 T... 62 4e-09 UniRef50_C2CWL5 Prophage ps3 protein 01 n=1 Tax=Gardnerella vagi... 62 4e-09 UniRef50_A3DFY7 Uncharacterized phage-associated protein-like pr... 62 4e-09 UniRef50_A7HHQ8 Helix-turn-helix domain protein n=1 Tax=Anaeromy... 62 6e-09 UniRef50_C8WN21 Transcriptional regulator, XRE family n=1 Tax=Eg... 62 7e-09 UniRef50_Q2RPT5 Transcriptional regulator, XRE family n=3 Tax=Al... 62 8e-09 UniRef50_C8Q118 Transcriptional regulator, XRE family n=1 Tax=En... 61 9e-09 UniRef50_A8GWH9 Putative transcriptional regulator n=2 Tax=Ricke... 61 1e-08 UniRef50_A1VJ81 Helix-turn-helix domain protein n=11 Tax=Proteob... 60 2e-08 UniRef50_A6W266 Helix-turn-helix domain protein n=2 Tax=Gammapro... 60 2e-08 UniRef50_B2UKR2 Transcriptional regulator, XRE family n=1 Tax=Ak... 60 2e-08 UniRef50_Q5P4X5 DNA-binding protein n=8 Tax=Proteobacteria RepID... 60 2e-08 UniRef50_Q7N0B1 Similar to unknown protein n=6 Tax=Enterobacteri... 60 2e-08 UniRef50_Q2IEG7 Transcriptional regulator, XRE family n=1 Tax=An... 60 2e-08 UniRef50_Q3B427 Transcriptional regulator, XRE family n=6 Tax=Ba... 60 3e-08 UniRef50_A7HUI5 Helix-turn-helix domain protein n=1 Tax=Parvibac... 60 3e-08 UniRef50_B0BVA4 Transcriptional repressor n=9 Tax=spotted fever ... 60 3e-08 UniRef50_B0P3V7 Putative uncharacterized protein n=1 Tax=Clostri... 60 3e-08 UniRef50_C6N0S5 XRE family transcriptional regulator n=1 Tax=Leg... 59 3e-08 UniRef50_C2EVP3 Phage associated protein n=10 Tax=Lactobacillus ... 59 4e-08 UniRef50_Q1DFX0 Conserved domain protein n=1 Tax=Myxococcus xant... 59 5e-08 UniRef50_A9BHQ9 Helix-turn-helix domain protein n=1 Tax=Petrotog... 59 5e-08 UniRef50_A1WP30 Transcriptional regulator, XRE family n=4 Tax=Pr... 59 6e-08 UniRef50_A7BVU4 Putative uncharacterized protein n=1 Tax=Beggiat... 59 6e-08 UniRef50_C7JIU1 Transcriptional regulator Xre n=8 Tax=Acetobacte... 58 7e-08 UniRef50_A0S0K2 Helix-turn-helix motif protein n=1 Tax=Acinetoba... 58 9e-08 UniRef50_B5EAM0 Putative uncharacterized protein n=1 Tax=Geobact... 58 9e-08 UniRef50_B1TDU4 Putative uncharacterized protein n=1 Tax=Burkhol... 58 1e-07 UniRef50_A8V2S1 Putative uncharacterized protein n=1 Tax=Hydroge... 58 1e-07 UniRef50_C4Z706 Putative uncharacterized protein n=3 Tax=Clostri... 57 1e-07 UniRef50_Q1NLC9 Helix-turn-helix motif n=12 Tax=cellular organis... 57 1e-07 UniRef50_D1AHE8 Putative uncharacterized protein n=1 Tax=Sebalde... 57 1e-07 UniRef50_C6S831 Putative transcriptional regulator n=2 Tax=Neiss... 57 1e-07 UniRef50_B8ILW2 Transcriptional regulator, XRE family n=1 Tax=Me... 57 1e-07 UniRef50_B0T885 Transcriptional regulator, XRE family n=2 Tax=Al... 57 1e-07 UniRef50_A3XE19 Transcriptional regulator, XRE family protein n=... 57 1e-07 UniRef50_Q2RXN6 Transcriptional regulator, XRE family n=1 Tax=Rh... 57 2e-07 UniRef50_C8WL78 Transcriptional regulator, XRE family n=1 Tax=Eg... 57 2e-07 UniRef50_D1RWL1 Putative uncharacterized protein n=1 Tax=Serrati... 57 2e-07 UniRef50_C4KSU6 Transcriptional regulator, XRE family n=19 Tax=p... 57 2e-07 UniRef50_Q2SMC7 Predicted transcriptional regulator n=1 Tax=Hahe... 56 3e-07 UniRef50_A3V8Z5 Transcriptional regulator, XRE family n=2 Tax=Ba... 56 3e-07 UniRef50_Q1YM79 Putative uncharacterized protein n=1 Tax=Auranti... 56 3e-07 UniRef50_C6MUZ5 Transcriptional regulator, XRE family n=1 Tax=Ge... 56 4e-07 UniRef50_A1U433 Helix-turn-helix domain protein n=2 Tax=Gammapro... 56 4e-07 UniRef50_B3EG51 Transcriptional regulator, XRE family n=5 Tax=Ch... 56 4e-07 UniRef50_C7JJ64 Transcriptional regulator Xre n=8 Tax=Acetobacte... 55 6e-07 UniRef50_Q01NF8 Transcriptional regulator, XRE family n=1 Tax=Ca... 55 6e-07 UniRef50_B4TA30 DNA-binding protein n=47 Tax=Proteobacteria RepI... 55 6e-07 UniRef50_Q0AU89 Putative uncharacterized protein n=1 Tax=Syntrop... 55 7e-07 UniRef50_Q9KMA5 Antitoxin higA-2 n=32 Tax=Proteobacteria RepID=H... 55 7e-07 UniRef50_B1ZE25 Transcriptional regulator, XRE family n=8 Tax=Ba... 55 9e-07 UniRef50_Q9JXT5 Helix-turn-helix family protein n=1 Tax=Neisseri... 55 9e-07 UniRef50_A6Q853 Putative uncharacterized protein n=1 Tax=Sulfuro... 54 1e-06 UniRef50_B6WV39 Putative uncharacterized protein n=1 Tax=Desulfo... 54 1e-06 UniRef50_B1ZSG3 Transcriptional regulator, XRE family n=1 Tax=Op... 54 1e-06 UniRef50_C0VJ40 Helix-turn-helix XRE family protein n=1 Tax=Acin... 54 1e-06 UniRef50_C6N1Q6 Putative uncharacterized protein n=1 Tax=Legione... 54 2e-06 UniRef50_Q73NN7 DNA-binding protein, putative n=1 Tax=Treponema ... 54 2e-06 UniRef50_B8F4C3 Predicted helix-turn-helix containing protein n=... 54 2e-06 UniRef50_Q6MB64 Putative uncharacterized protein n=2 Tax=Candida... 53 3e-06 UniRef50_B9ZKV2 Transcriptional regulator, XRE family n=1 Tax=Th... 53 3e-06 UniRef50_B3QWV0 Transcriptional regulator, XRE family n=3 Tax=Ba... 53 3e-06 UniRef50_Q6MCF7 Putative uncharacterized protein n=2 Tax=Candida... 53 3e-06 UniRef50_Q0G0M0 DNA-binding protein n=1 Tax=Fulvimarina pelagi H... 53 4e-06 UniRef50_C2LEY4 Regulatory protein n=4 Tax=Enterobacteriaceae Re... 52 4e-06 UniRef50_Q5HXG4 Putative uncharacterized protein n=2 Tax=Alphapr... 52 4e-06 UniRef50_Q3B4L5 Transcriptional regulator, XRE family n=2 Tax=Ch... 52 4e-06 UniRef50_B5UX67 Prophage ps3 protein 01, putative n=10 Tax=Firmi... 52 4e-06 UniRef50_B2FJQ1 Putative DNA-binding protein n=1 Tax=Stenotropho... 52 5e-06 UniRef50_B2ICD7 Transcriptional regulator, XRE family n=2 Tax=Rh... 52 5e-06 UniRef50_A8GG35 Transcriptional regulator, XRE family n=2 Tax=Pr... 52 6e-06 UniRef50_B5W498 Transcriptional regulator, XRE family n=2 Tax=Ar... 52 6e-06 UniRef50_A6DKJ3 Transcriptional regulator-like protein n=1 Tax=L... 52 6e-06 UniRef50_B1Z950 Putative uncharacterized protein n=1 Tax=Methylo... 52 6e-06 UniRef50_B8FKT9 Putative transcriptional regulator, XRE family n... 52 7e-06 UniRef50_D0IHU8 Putative uncharacterized protein n=1 Tax=Vibrio ... 52 8e-06 UniRef50_A1AZA3 Transcriptional regulator, XRE family n=3 Tax=Ba... 51 1e-05 UniRef50_D2BLB0 Phage protein, transcriptional regulator, Cro/CI... 51 1e-05 UniRef50_P0A9V7 Uncharacterized HTH-type transcriptional regulat... 51 1e-05 UniRef50_Q88NK9 Transcriptional regulator, Cro/CI family n=56 Ta... 51 1e-05 UniRef50_C1AE28 Xre family DNA binding protein n=1 Tax=Gemmatimo... 51 1e-05 UniRef50_C8WG12 Transcriptional regulator, XRE family n=2 Tax=Zy... 51 1e-05 UniRef50_C1TS72 Predicted transcriptional regulator, COG2944 n=1... 51 1e-05 UniRef50_B8IBQ3 Transcriptional regulator, XRE family n=1 Tax=Me... 50 1e-05 UniRef50_Q1I9J8 Putative transcriptional regulator n=1 Tax=Pseud... 50 2e-05 UniRef50_D2LEA3 Transcriptional regulator, XRE family n=1 Tax=Rh... 50 2e-05 UniRef50_A9IKE0 Putative DNA-binding protein n=1 Tax=Bartonella ... 50 2e-05 UniRef50_D1Y8M5 Helix-turn-helix domain protein n=1 Tax=Pyramido... 50 2e-05 UniRef50_C3QME8 Helix-turn-helix domain-containing protein n=2 T... 50 2e-05 UniRef50_C2XDJ5 Prophage ps3 protein 01 n=1 Tax=Bacillus cereus ... 50 2e-05 UniRef50_C7BSN7 Putative uncharacterized protein n=1 Tax=Photorh... 50 2e-05 UniRef50_C0GWH0 Transcriptional regulator, XRE family n=4 Tax=Pr... 50 2e-05 UniRef50_A5V2L1 Transcriptional regulator, XRE family n=31 Tax=B... 50 2e-05 UniRef50_A8HTF6 Putative transcriptional regulator n=1 Tax=Azorh... 50 2e-05 UniRef50_C1A4Y5 Putative uncharacterized protein n=1 Tax=Gemmati... 50 2e-05 UniRef50_Q1WR49 Putative uncharacterized protein n=1 Tax=Lactoba... 50 3e-05 UniRef50_Q1QKM4 Transcriptional regulator, XRE family n=3 Tax=Br... 50 3e-05 UniRef50_Q6FBH4 Putative uncharacterized protein n=1 Tax=Acineto... 50 3e-05 UniRef50_C4ZEX8 Putative uncharacterized protein n=2 Tax=Clostri... 50 3e-05 UniRef50_Q2IXH5 Transcriptional regulator, XRE family n=6 Tax=Br... 50 3e-05 UniRef50_Q1NRF9 Virulence gene repressor RsaL n=9 Tax=Proteobact... 50 3e-05 UniRef50_Q6RGN8 SLV.32 n=1 Tax=Streptomyces lavendulae RepID=Q6R... 49 4e-05 UniRef50_B5ZMC0 Putative uncharacterized protein n=1 Tax=Glucona... 49 4e-05 UniRef50_B8HYF2 Transcriptional regulator, XRE family n=1 Tax=Cy... 49 4e-05 UniRef50_UPI0001A43291 hypothetical protein PcarcW_16193 n=2 Tax... 49 5e-05 UniRef50_B4S2A5 DNA-binding protein n=2 Tax=Gammaproteobacteria ... 49 5e-05 UniRef50_Q1Q5F4 Putative uncharacterized protein n=1 Tax=Candida... 49 5e-05 UniRef50_C7H8I0 SOS-response transcriptional repressor n=4 Tax=R... 49 5e-05 UniRef50_A7ZY95 Helix-turn-helix DNA-binding domain protein n=17... 49 5e-05 UniRef50_Q203Z2 PQC542.18 n=1 Tax=Streptomyces lividans RepID=Q2... 49 5e-05 UniRef50_C1D7U6 Virulence gene repressor RsaL n=6 Tax=Proteobact... 49 5e-05 UniRef50_C9KJV6 Toxin-antitoxin system, antitoxin component, Xre... 49 6e-05 UniRef50_C0VMX9 Possible transcriptional regulator n=1 Tax=Acine... 49 7e-05 UniRef50_A0L322 Transcriptional regulator, XRE family n=1 Tax=Sh... 49 7e-05 UniRef50_Q1NR99 Helix-turn-helix motif n=1 Tax=delta proteobacte... 48 7e-05 UniRef50_Q2Y8T7 Transcriptional regulator, XRE family n=1 Tax=Ni... 48 8e-05 UniRef50_A9EN56 Transcriptional Regulator, XRE family protein n=... 48 8e-05 UniRef50_C1TL47 Predicted transcriptional regulator n=1 Tax=Deth... 48 8e-05 UniRef50_B3GN69 Putative HTH_XRE family transcription factor n=1... 48 9e-05 UniRef50_C8WKY9 Transcriptional regulator, XRE family n=1 Tax=Eg... 48 1e-04 UniRef50_B7UKA8 Predicted protein n=15 Tax=Enterobacteriaceae Re... 48 1e-04 UniRef50_A0KB55 Transcriptional regulator-like protein n=17 Tax=... 48 1e-04 UniRef50_B8HJX4 Transcriptional regulator, XRE family n=2 Tax=Cy... 48 1e-04 UniRef50_A7VY66 Putative uncharacterized protein n=1 Tax=Clostri... 48 1e-04 UniRef50_C7N355 Uncharacterized conserved protein n=1 Tax=Slacki... 48 1e-04 UniRef50_Q8VR10 Cytosine-specific methyltransferase n=1 Tax=Bact... 48 1e-04 UniRef50_A9BTE8 Transcriptional regulator, XRE family n=1 Tax=De... 47 1e-04 UniRef50_UPI000197C515 hypothetical protein PretD1_18434 n=1 Tax... 47 1e-04 UniRef50_B4W2P1 Helix-turn-helix domain protein n=2 Tax=Microcol... 47 1e-04 UniRef50_A4SL74 Transcriptional regulator, XRE family n=15 Tax=G... 47 1e-04 UniRef50_A9N8E3 DNA-binding protein n=19 Tax=Bacteria RepID=A9N8... 47 1e-04 UniRef50_Q2RI62 Putative uncharacterized protein n=1 Tax=Moorell... 47 1e-04 UniRef50_Q849G7 Putative regulatory protein n=1 Tax=Streptomyces... 47 1e-04 UniRef50_A7NG24 Transcriptional regulator, XRE family n=2 Tax=Ro... 47 1e-04 UniRef50_C4SSE5 Predicted transcriptional regulator n=1 Tax=Yers... 47 1e-04 UniRef50_A8STQ9 Putative uncharacterized protein n=1 Tax=Coproco... 47 2e-04 UniRef50_O28162 Inosine monophosphate dehydrogenase (GuaB-2) n=2... 47 2e-04 UniRef50_C0QSB5 Transcriptional regulator, xre family n=1 Tax=Pe... 47 2e-04 UniRef50_C0CY08 Putative uncharacterized protein n=1 Tax=Clostri... 47 2e-04 UniRef50_B7GM93 Predicted transcriptional regulator, xre family ... 47 2e-04 UniRef50_Q89JN3 Bll5250 protein n=3 Tax=Bradyrhizobium RepID=Q89... 47 2e-04 UniRef50_Q2G4Q6 Transcriptional regulator, XRE family n=1 Tax=No... 47 2e-04 UniRef50_B2I5D4 Transcriptional regulator, XRE family n=8 Tax=Xy... 47 2e-04 UniRef50_B7KUC3 Transcriptional regulator, XRE family n=6 Tax=Ba... 47 2e-04 UniRef50_B7QUY4 Putative uncharacterized protein n=1 Tax=Ruegeri... 47 2e-04 UniRef50_Q6ALK0 Putative uncharacterized protein n=1 Tax=Desulfo... 47 2e-04 UniRef50_Q044U0 Transcriptional regulator, xre family n=3 Tax=ro... 47 2e-04 UniRef50_A8YX20 Phage associated protein n=3 Tax=Lactobacillus R... 47 2e-04 UniRef50_Q24LF2 Putative uncharacterized protein n=1 Tax=Clostri... 47 2e-04 UniRef50_A7B1I5 Putative uncharacterized protein n=1 Tax=Ruminoc... 47 2e-04 UniRef50_Q3M3V5 Transcriptional regulator, XRE family n=3 Tax=Ba... 47 2e-04 UniRef50_C9KLU7 Toxin-antitoxin system, antitoxin component, Xre... 47 2e-04 UniRef50_B9Y5F9 Putative uncharacterized protein n=1 Tax=Holdema... 47 2e-04 UniRef50_A9L1Q6 DNA-binding protein n=7 Tax=Proteobacteria RepID... 47 2e-04 UniRef50_C4Z4H6 Putative uncharacterized protein n=1 Tax=Eubacte... 47 3e-04 UniRef50_B2J239 Transcriptional regulator, XRE family n=3 Tax=Cy... 47 3e-04 UniRef50_A8RCT6 Putative uncharacterized protein n=1 Tax=Eubacte... 47 3e-04 UniRef50_B0MKY5 Putative uncharacterized protein n=1 Tax=Eubacte... 47 3e-04 UniRef50_B4SF25 Putative uncharacterized protein n=1 Tax=Pelodic... 46 3e-04 UniRef50_P69202 Repressor protein C2 n=23 Tax=root RepID=RPC2_BPP22 46 3e-04 UniRef50_C7N7P9 Predicted transcriptional regulator n=1 Tax=Slac... 46 3e-04 UniRef50_B7KUW4 Transcriptional regulator, XRE family n=3 Tax=Me... 46 3e-04 UniRef50_A8SNW9 Putative uncharacterized protein n=1 Tax=Coproco... 46 3e-04 UniRef50_Q46NP6 Helix-turn-helix motif n=1 Tax=Ralstonia eutroph... 46 3e-04 UniRef50_A9KUS5 Transcriptional regulator, XRE family n=1 Tax=Sh... 46 3e-04 UniRef50_C0EBZ8 Putative uncharacterized protein n=2 Tax=Clostri... 46 3e-04 UniRef50_A0YJB7 Putative uncharacterized protein n=4 Tax=Lyngbya... 46 3e-04 UniRef50_C6VMP8 Transcription regulator n=4 Tax=Lactobacillus pl... 46 3e-04 UniRef50_B4B443 Transcriptional regulator, XRE family n=1 Tax=Cy... 46 4e-04 UniRef50_UPI0001C3E5CC protein of unknown function DUF955 n=1 Ta... 46 4e-04 UniRef50_C8WMU4 Transcriptional regulator, XRE family n=1 Tax=Eg... 46 4e-04 UniRef50_B2V2D3 Transcriptional regulator n=1 Tax=Clostridium bo... 46 4e-04 UniRef50_A1SIU0 Helix-turn-helix domain protein n=1 Tax=Nocardio... 46 4e-04 UniRef50_B9K2R1 Putative uncharacterized protein n=1 Tax=Agrobac... 46 4e-04 UniRef50_B7KHR6 Transcriptional regulator, XRE family n=2 Tax=Cy... 46 4e-04 UniRef50_C8Q2C3 Transcriptional regulator, XRE family n=1 Tax=Pa... 46 4e-04 UniRef50_A7HZA9 DNA-binding protein n=24 Tax=Bacteria RepID=A7HZ... 46 4e-04 UniRef50_UPI0001C37439 XRE family transcriptional regulator n=1 ... 46 4e-04 UniRef50_A8R7R1 Putative uncharacterized protein n=1 Tax=Eubacte... 46 4e-04 UniRef50_A5ZTD7 Putative uncharacterized protein n=1 Tax=Ruminoc... 46 4e-04 UniRef50_C7GBK6 Transcriptional regulator of NagC/XylR family, s... 46 5e-04 UniRef50_O69899 Putative transcriptional regulator n=1 Tax=Strep... 45 5e-04 UniRef50_D2QEV1 Transcriptional regulator, XRE family n=2 Tax=Sp... 45 5e-04 UniRef50_C9L4G8 Toxin-antitoxin system, antitoxin component, Xre... 45 5e-04 >UniRef50_Q46864 Uncharacterized HTH-type transcriptional regulator ygiT n=58 Tax=Proteobacteria RepID=YGIT_ECOLI Length = 131 Score = 184 bits (467), Expect = 7e-46, Method: Composition-based stats. Identities = 131/131 (100%), Positives = 131/131 (100%) Query: 1 MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAF 60 MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAF Sbjct: 1 MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAF 60 Query: 61 RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVL 120 RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVL Sbjct: 61 RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVL 120 Query: 121 DKHPELLNEIR 131 DKHPELLNEIR Sbjct: 121 DKHPELLNEIR 131 >UniRef50_B9W0T3 Transcriptional regulator n=2 Tax=Shewanella RepID=B9W0T3_9GAMM Length = 135 Score = 160 bits (404), Expect = 1e-38, Method: Composition-based stats. Identities = 50/129 (38%), Positives = 76/129 (58%), Gaps = 2/129 (1%) Query: 2 KCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 CP C +G + KD Y ++G ++ G+YC CEE+I+ A ++ FR Sbjct: 8 TCPFCGEGHLNLSTKDKEYNYQGHTLLIPQ-PGIYCDVCEEAILEPSHLKATRVDLQEFR 66 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 A ++ V P I K+RK++ L Q+EA+ + GGG NAFSRYE+G P + +LL++ D Sbjct: 67 ARIDG-IVGPRAIRKIRKQIGLNQQEAALLLGGGKNAFSRYEQGELSPPKAVSQLLKLFD 125 Query: 122 KHPELLNEI 130 KHPEL+ E+ Sbjct: 126 KHPELVKEL 134 >UniRef50_C0GU77 Transcriptional regulator with HTH domain protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GU77_9DELT Length = 167 Score = 159 bits (402), Expect = 3e-38, Method: Composition-based stats. Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 1/130 (0%) Query: 1 MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAF 60 M CPVC +G + +K + ++G+ ++ L C CEE ++ E+S F ++ AF Sbjct: 7 MSCPVCGKGYIQRHLKREEFEYKGQAKIIDDYPLLICDACEEEFVSAEDSRLFDKELTAF 66 Query: 61 RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVL 120 + V+ P+ I +R+KL Q + + G F+RYE G + L+R+L Sbjct: 67 QRKVDGLLT-PDEIRSIREKLGYNQTSFARLLKVGEKNFARYETGVSPQSRYLDWLMRIL 125 Query: 121 DKHPELLNEI 130 + +PE + I Sbjct: 126 NDYPETIKTI 135 >UniRef50_Q2Y6W9 Transcriptional regulator, XRE family n=2 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y6W9_NITMU Length = 157 Score = 159 bits (401), Expect = 3e-38, Method: Composition-based stats. Identities = 64/133 (48%), Positives = 87/133 (65%), Gaps = 2/133 (1%) Query: 1 MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKE-ESDAFMAQVKA 59 M+C +C +GE+V+G +D+P+T++G+KT +K I G YC C E E + D MA + Sbjct: 1 MRCSLCGKGEVVAGTRDVPFTYKGQKTFIKNIRGEYCNRCGEGYYGPEHDGDILMAGYRE 60 Query: 60 FRASVNAETVA-PEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLR 118 FR V+ F+ +VRKKL L Q+EA EIFGGGVNAFSRYE G + S ++L Sbjct: 61 FREKVDTVLAEQATFVEQVRKKLGLDQREAGEIFGGGVNAFSRYETGKVRTPVSVMQLFT 120 Query: 119 VLDKHPELLNEIR 131 +LD+HPELL EIR Sbjct: 121 LLDRHPELLEEIR 133 >UniRef50_Q07J16 Transcriptional regulator, XRE family n=2 Tax=Proteobacteria RepID=Q07J16_RHOP5 Length = 134 Score = 158 bits (399), Expect = 6e-38, Method: Composition-based stats. Identities = 43/132 (32%), Positives = 70/132 (53%), Gaps = 5/132 (3%) Query: 2 KCPVCHQG--EMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKA 59 PVC + MV + + T++G+ + + G YC ESI ++ ++ Sbjct: 3 TAPVCPETGLPMVRDTRPMTITYKGQSATI-AMPGWYCDESGESIHTGDDMQVSDEALRD 61 Query: 60 FRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRV 119 + + + I ++RKK+ LTQ+EA IFGGG NAF +YE+G+ + LLRV Sbjct: 62 LKNKAD--ILDGAEIRRIRKKIGLTQREAGAIFGGGPNAFQKYEQGSVTVSKAMSNLLRV 119 Query: 120 LDKHPELLNEIR 131 L+KHPE + E++ Sbjct: 120 LEKHPEEVEELK 131 >UniRef50_A7BW93 Transcriptional regulator, XRE family n=1 Tax=Beggiatoa sp. PS RepID=A7BW93_9GAMM Length = 139 Score = 154 bits (388), Expect = 1e-36, Method: Composition-based stats. Identities = 49/129 (37%), Positives = 74/129 (57%), Gaps = 2/129 (1%) Query: 2 KCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 +CP+C G + YT++G ++ G +C C+E I+N + +A Q++ F+ Sbjct: 4 ECPLCKTGFLERKTIKEMYTYKGHSIEIEQ-PGEFCNVCDEGILNSTDLNATEKQIRDFQ 62 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 + ++ A E I KVR+KL L+Q EA+EI G N FSRYE+G P S LL +L+ Sbjct: 63 SKIDGLLTASE-IRKVRQKLKLSQFEAAEICGNDPNTFSRYERGEEIPQRSISNLLMILN 121 Query: 122 KHPELLNEI 130 HPELL E+ Sbjct: 122 NHPELLLEL 130 >UniRef50_C6P435 Transcriptional regulator, XRE family n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P435_9PROT Length = 132 Score = 149 bits (376), Expect = 2e-35, Method: Composition-based stats. Identities = 50/128 (39%), Positives = 77/128 (60%), Gaps = 2/128 (1%) Query: 3 CPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRA 62 C C +G+MV KD +RG + +++ + G +C C E +E + ++ R Sbjct: 5 CLNCEKGDMVRTKKDSEIEYRGHRAIVRALDGWHCPECGEVEFAGKEGVRYAEALEKLRL 64 Query: 63 SVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 ++AE + ++RKKL L+Q+ A+ I GGGVNAFSRYE G A+P + + L R+L+K Sbjct: 65 KIDAEE--SAELARIRKKLKLSQRRAAAIAGGGVNAFSRYENGKARPVAAVVNLFRLLEK 122 Query: 123 HPELLNEI 130 HPELL+EI Sbjct: 123 HPELLDEI 130 >UniRef50_C6N7W9 Transcriptional regulator n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N7W9_9GAMM Length = 147 Score = 149 bits (376), Expect = 3e-35, Method: Composition-based stats. Identities = 43/128 (33%), Positives = 72/128 (56%), Gaps = 2/128 (1%) Query: 3 CPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRA 62 CP+C + + Y ++G + L+C C E +++ E++ A +++ R+ Sbjct: 6 CPICGELAASHEERSTTYHYKGHAFCIMQ-PALWCDSCGEGVISPEDNKATALEIQGHRS 64 Query: 63 SVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 ++ + P I K+RK L+L QK+AS +FGGG+N+F+RYE+G LL +LDK Sbjct: 65 RIDG-ILTPNEIAKIRKHLNLNQKDASRLFGGGINSFNRYERGTNPIPKPLSMLLVLLDK 123 Query: 123 HPELLNEI 130 HPE L E+ Sbjct: 124 HPEQLQEL 131 >UniRef50_A4U5T1 Transcriptional regulator, XRE family n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U5T1_9PROT Length = 136 Score = 148 bits (373), Expect = 5e-35, Method: Composition-based stats. Identities = 47/132 (35%), Positives = 73/132 (55%), Gaps = 5/132 (3%) Query: 1 MKCPVCHQ--GEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVK 58 M CH+ EMV I+ + +T++G + G YC C E ++ E+S A+ Sbjct: 1 MTMATCHECGAEMVRDIRPMEFTYKGHTLTV-QQPGWYC-ACGEGVLTPEDSAVTQAEYV 58 Query: 59 AFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLR 118 AFR V+ + P + ++RK+L L QK+A + GGG +AF +YE+ + +P + LLR Sbjct: 59 AFRDQVDG-ILPPAEVRRIRKRLGLQQKQAGVVLGGGASAFGKYERKDGKPSLAMSNLLR 117 Query: 119 VLDKHPELLNEI 130 +LDK P L EI Sbjct: 118 LLDKDPSRLQEI 129 >UniRef50_C6MW82 Transcriptional regulator, XRE family n=1 Tax=Geobacter sp. M18 RepID=C6MW82_9DELT Length = 154 Score = 148 bits (373), Expect = 6e-35, Method: Composition-based stats. Identities = 47/131 (35%), Positives = 76/131 (58%), Gaps = 3/131 (2%) Query: 1 MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAF 60 M+CP C Q EMV+ ++D T+ G+ L + G +C C+E I + + + A Sbjct: 1 MRCPACGQ-EMVAEVRDETLTYGGQSLTLHAMQGEFCTGCDEGIWDAQSYRRYTEAQSAL 59 Query: 61 RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVL 120 +V + + I ++RK L LTQ E ++ FG G AFSRYE+G +P +KLL+++ Sbjct: 60 VRTVKGDISS--DIRRIRKNLKLTQTELADAFGVGKVAFSRYERGETRPPAPLVKLLKLI 117 Query: 121 DKHPELLNEIR 131 ++HPELL E++ Sbjct: 118 ERHPELLKEMQ 128 >UniRef50_C7RJM0 Transcriptional regulator, XRE family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RJM0_9PROT Length = 136 Score = 146 bits (368), Expect = 2e-34, Method: Composition-based stats. Identities = 51/130 (39%), Positives = 71/130 (54%), Gaps = 3/130 (2%) Query: 3 CPVCHQGE-MVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 C C G + G +D+ T G + + G +C C + E F A + A R Sbjct: 7 CLQCDDGSVLQHGAQDMMITIDGMSQTVPAVVGWHCPTCGTCEFDDGEGKRFSATLAALR 66 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 NA+ A + +RKKL L Q +A +FGGG +AFS YE+G QPH ST+ LL++LD Sbjct: 67 QLANAQRAAS--LRAIRKKLGLRQADAGRLFGGGASAFSEYERGKTQPHKSTVLLLKLLD 124 Query: 122 KHPELLNEIR 131 +HPELL E+R Sbjct: 125 RHPELLEELR 134 >UniRef50_C4XJ50 Xre family DNA-binding protein n=3 Tax=Desulfovibrio RepID=C4XJ50_DESMR Length = 135 Score = 146 bits (367), Expect = 3e-34, Method: Composition-based stats. Identities = 40/129 (31%), Positives = 70/129 (54%), Gaps = 4/129 (3%) Query: 5 VCHQG--EMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRA 62 +CH+ EMV ++ + ++++G+ + + G YC C E + + + + A +A Sbjct: 1 MCHEDGIEMVRDVRPVEFSYKGQTMTV-AMPGWYCPKCGEGLYTRADMKVSDRALNAMKA 59 Query: 63 SVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 P+ + ++RKKL LTQ A ++ GGG AF++YEKG+A + LL+VLD Sbjct: 60 RCEGLLDGPQ-VKRIRKKLGLTQAAAGDLIGGGPKAFTKYEKGDALTSRAVTNLLKVLDA 118 Query: 123 HPELLNEIR 131 P+ L +R Sbjct: 119 VPDALTILR 127 >UniRef50_A5GA93 Helix-turn-helix domain protein n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5GA93_GEOUR Length = 140 Score = 145 bits (366), Expect = 4e-34, Method: Composition-based stats. Identities = 52/130 (40%), Positives = 76/130 (58%), Gaps = 3/130 (2%) Query: 2 KCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 CP C QG + +K + +R G +C C E I+ +E+ A + + F Sbjct: 9 TCPACFQGTLEHRVKRTQFEYRSNILEY-DQEGAWCGTCGEGIVTGKEAAAAESLLDDFI 67 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 A V+ E + + ++RKKL L QKEA+ I GGG NAFSRYE+G A+P + + L R+LD Sbjct: 68 ARVDKEEAS--ELARIRKKLGLNQKEAAMIAGGGHNAFSRYERGEARPVAAVVNLFRLLD 125 Query: 122 KHPELLNEIR 131 +HPELLNE++ Sbjct: 126 RHPELLNELK 135 >UniRef50_Q2LYD1 Transcriptional regulator with HTH domain n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LYD1_SYNAS Length = 182 Score = 144 bits (363), Expect = 9e-34, Method: Composition-based stats. Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 1/130 (0%) Query: 2 KCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 KC +C + + + ++G+K + C C E+I++ +K F+ Sbjct: 12 KCSICGAESLTRKVGTESFEYKGKKKEIPNYVTYECSECGEAIVDSATLKESGKILKDFQ 71 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 V+ P+ I +R KL LTQ++ + I GGG+ + +RYE G LLR+LD Sbjct: 72 REVDGLLTGPQ-IKAIRIKLGLTQEQLANIIGGGLKSVARYESGQVCQSKGMDNLLRILD 130 Query: 122 KHPELLNEIR 131 +P+ L I+ Sbjct: 131 AYPQTLKIIQ 140 >UniRef50_Q58KB7 ORF170 n=2 Tax=Bacteria RepID=Q58KB7_9BACT Length = 170 Score = 144 bits (362), Expect = 1e-33, Method: Composition-based stats. Identities = 42/119 (35%), Positives = 63/119 (52%) Query: 1 MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAF 60 MKCP C E++ +D+P ++G T++ + G +C CEE I+N+E + + F Sbjct: 1 MKCPCCGAAELIHDTRDMPTLYKGENTMIPAVTGDFCPACEEVILNREHGARYSELIGQF 60 Query: 61 RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRV 119 VNA V P +I KVRKKL L Q++A+E FGG + S + P + L V Sbjct: 61 HRQVNAAYVDPGYIAKVRKKLDLDQRQAAEDFGGLASMPSHATRTARPSRPCCSRCLNV 119 >UniRef50_A7BUF7 Transcriptional regulator, Cro/CI family n=1 Tax=Beggiatoa sp. PS RepID=A7BUF7_9GAMM Length = 140 Score = 140 bits (353), Expect = 1e-32, Method: Composition-based stats. Identities = 35/130 (26%), Positives = 67/130 (51%), Gaps = 1/130 (0%) Query: 2 KCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 +CP+C +++ Y ++G L I C C ++ +S A+++ Sbjct: 7 RCPMCESADLIPKKIIEHYCYKGHDFSLADIEYAECPKCHSEVITPGQSTRNEARIRDEH 66 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 ++ E I+++R++L +TQ +A++IFG VNAFS+YE G A + + KL+++ Sbjct: 67 RKIDGLFTRAE-IIQLREQLKITQNQAAQIFGEHVNAFSKYESGEATQNKAMDKLMKLAL 125 Query: 122 KHPELLNEIR 131 P+ E+R Sbjct: 126 NMPQCFEELR 135 >UniRef50_A1BG77 Transcriptional regulator, XRE family n=7 Tax=Chlorobiaceae RepID=A1BG77_CHLPD Length = 136 Score = 139 bits (350), Expect = 3e-32, Method: Composition-based stats. Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 2/129 (1%) Query: 2 KCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 +CP C M+ + + T+ G+ L +HG +C C E I ++E + + Sbjct: 7 QCPSCGHKGMIDKVLEETLTYGGKSMTLHDMHGRFCPECGEGIWDEESCRRYTEAQEGLV 66 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 ++ + A I ++R+KL LTQ + + FG G AFSRYE+G +P +KLL+++D Sbjct: 67 RAIKGDPAA--DIRRIRRKLKLTQAQLASSFGVGKVAFSRYERGETRPPAPLLKLLKLID 124 Query: 122 KHPELLNEI 130 +HP+LLNEI Sbjct: 125 RHPDLLNEI 133 >UniRef50_A5G9X9 Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G9X9_GEOUR Length = 168 Score = 137 bits (346), Expect = 8e-32, Method: Composition-based stats. Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 2/129 (1%) Query: 2 KCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 +CP+C G++ +T++G++ G C C E + K+ A +++ F Sbjct: 10 QCPLCI-GKLKETSVTEKFTYKGKELEYPGYIVHECDRCGEQFVGKKTMKASAKRLRDFY 68 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 V+ + + I ++R KL L Q ASE+ GGG +F+RYE + + LLRVL Sbjct: 69 REVDGLLTSCQ-IKEIRLKLGLNQGAASELLGGGAKSFARYENCDVIQSEAMDNLLRVLK 127 Query: 122 KHPELLNEI 130 P+LL I Sbjct: 128 DSPDLLKVI 136 >UniRef50_Q1IJ02 Transcriptional regulator, XRE family n=2 Tax=Bacteria RepID=Q1IJ02_ACIBL Length = 155 Score = 137 bits (344), Expect = 1e-31, Method: Composition-based stats. Identities = 44/132 (33%), Positives = 67/132 (50%), Gaps = 4/132 (3%) Query: 2 KCPVCHQGEMVSGIKDIPYT--FRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKA 59 KC C +++ +T + T + G+ G CV C E + + + A A Sbjct: 4 KCVSCASAKVMVPFSSETFTIKYGAATTKISGLSGWKCVACGEVEFDARSAKRYAAAGDA 63 Query: 60 FRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRV 119 + E + ++R+KL LTQ A+ + GGG NAFSRYE+G P S + L R+ Sbjct: 64 LVIAQRKEL--GTELRRIRRKLGLTQASAARLTGGGHNAFSRYERGEVIPMSSVVNLFRL 121 Query: 120 LDKHPELLNEIR 131 LDKHPELL +++ Sbjct: 122 LDKHPELLKDLK 133 >UniRef50_C9KLV8 Toxin-antitoxin system, antitoxin component, Xre family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KLV8_9FIRM Length = 134 Score = 136 bits (342), Expect = 3e-31, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 2/121 (1%) Query: 10 EMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRASVNAETV 69 E+V ++ + ++ G + + G Y +E ++ + + +A + Sbjct: 15 ELVRDVRPMTISYAGHQMTF-SMPGWYPKDNDEGTFTDDDMKVYDKALNQLKAESE-HLL 72 Query: 70 APEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNE 129 P I +RKKL LTQ +A I GGG AF +YE P + LLRVL P LL Sbjct: 73 KPMEIRAIRKKLKLTQVQAGTILGGGKKAFQKYESDEILPSRAISNLLRVLAVQPSLLQT 132 Query: 130 I 130 I Sbjct: 133 I 133 >UniRef50_Q1QEY5 Transcriptional regulator, XRE family n=1 Tax=Nitrobacter hamburgensis X14 RepID=Q1QEY5_NITHX Length = 142 Score = 135 bits (340), Expect = 4e-31, Method: Composition-based stats. Identities = 39/131 (29%), Positives = 72/131 (54%), Gaps = 3/131 (2%) Query: 1 MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAF 60 M P + + G++ + T++G+ + + G Y + ++ I ++ A ++ Sbjct: 12 MVSPETGE-TLRRGVRPLIVTYKGKSITV-ELPGYYPDNGDDGIHVGDDMAITDAALRIL 69 Query: 61 RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVL 120 + + +P I +VR+KL L+Q+EA + G NAF +YE+G +P T +LLR+L Sbjct: 70 KEEIEG-IPSPATIRRVREKLKLSQREAGGLLKVGENAFDKYERGLVEPSGPTSQLLRLL 128 Query: 121 DKHPELLNEIR 131 D+HPELL ++R Sbjct: 129 DQHPELLEDLR 139 >UniRef50_B8GT54 Transcriptional regulator, XRE family n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GT54_THISH Length = 132 Score = 131 bits (330), Expect = 5e-30, Method: Composition-based stats. Identities = 48/125 (38%), Positives = 73/125 (58%), Gaps = 1/125 (0%) Query: 6 CHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRASVN 65 C G M I+D+ G + GI G++C C+E +S A A+V + Sbjct: 3 CETGSMTEDIRDVVVELDGLSRTVPGIRGMFCDTCKEIEFCDGDSAARYAEVMDALIAER 62 Query: 66 AETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPE 125 +A E + +RKKL LTQ++AS IFGGG+NAFSRYE+G +P + + LL V+++HPE Sbjct: 63 KTALALE-VRNLRKKLKLTQRQASMIFGGGINAFSRYERGVTEPSRAVMTLLHVMERHPE 121 Query: 126 LLNEI 130 + +E+ Sbjct: 122 IRDEL 126 >UniRef50_Q0A690 Putative uncharacterized protein n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A690_ALHEH Length = 204 Score = 128 bits (321), Expect = 6e-29, Method: Composition-based stats. Identities = 35/128 (27%), Positives = 54/128 (42%), Gaps = 2/128 (1%) Query: 3 CPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRA 62 CP C +G + G + +H C C + E+ A + AFR Sbjct: 12 CPACGEGRLEPRQTTQRAEHAGLSEAIP-LHYAVCDTCGSELAEAPEAKANKRAMTAFRK 70 Query: 63 SVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 + + + + RK L LTQ +A+++FGGG AFSRYE + + L+RV Sbjct: 71 RADGLLTGAQ-MRQARKALGLTQAQAAKLFGGGQVAFSRYENDDITQSEAMDSLVRVCLA 129 Query: 123 HPELLNEI 130 P L + Sbjct: 130 QPANLTLL 137 >UniRef50_C9P136 Putative uncharacterized protein n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P136_VIBME Length = 178 Score = 127 bits (318), Expect = 1e-28, Method: Composition-based stats. Identities = 31/128 (24%), Positives = 59/128 (46%), Gaps = 2/128 (1%) Query: 3 CPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRA 62 CP+C QG + + + I G++ + C C E + + AF+ Sbjct: 6 CPICEQGRLSNQEEIIHVEHMGQQGSISSQFST-CDVCGSEQATPENARFNKRAMIAFKK 64 Query: 63 SVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 V + ++RK + +Q++A++IFGGG AFS+YE + + +L+R+ Sbjct: 65 QVQGLLTG-MEVRELRKDWNFSQEDAAKIFGGGPVAFSKYESDDVMQSEAMDRLIRIARD 123 Query: 123 HPELLNEI 130 P L+++ Sbjct: 124 VPASLDKL 131 >UniRef50_C5V7T9 Putative uncharacterized protein n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V7T9_9PROT Length = 188 Score = 124 bits (311), Expect = 9e-28, Method: Composition-based stats. Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 2/122 (1%) Query: 3 CPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRA 62 C +C +G + + ++ P ++G L ++ C C + + + AF+ Sbjct: 8 CQICGEGHLSALVEINPVEYKGVSKEL-DMYCSICSVCGSEQASANDVRTNKRAMMAFKK 66 Query: 63 SVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 V+ + + +R K + Q AS IFGGG AFS+YE + + KLLR+ D Sbjct: 67 EVDGLLTGVQ-VRALRDKFGINQTYASLIFGGGPVAFSKYESDDVAQSEAMDKLLRLADA 125 Query: 123 HP 124 P Sbjct: 126 VP 127 >UniRef50_A7BYA6 Transcriptional regulator protein n=1 Tax=Beggiatoa sp. PS RepID=A7BYA6_9GAMM Length = 179 Score = 123 bits (309), Expect = 2e-27, Method: Composition-based stats. Identities = 36/128 (28%), Positives = 66/128 (51%), Gaps = 2/128 (1%) Query: 3 CPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRA 62 C +C + +++G + + + C C ++K++ A+++ + Sbjct: 4 CKLCKSDNISQFNDQEIISYKGTELSV-SMEYSICNRCGREFISKQQIINNDARMRDAKR 62 Query: 63 SVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 S++ + E I RKKL LTQ++AS++FGGG NAFS+YE+ + KL+R+ K Sbjct: 63 SLDGLMTSSE-IYDARKKLGLTQEQASKVFGGGKNAFSKYERSEVSQSVAMDKLIRICLK 121 Query: 123 HPELLNEI 130 HP + E+ Sbjct: 122 HPNVFREM 129 >UniRef50_C3K4N6 Putative uncharacterized protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K4N6_PSEFS Length = 163 Score = 119 bits (298), Expect = 3e-26, Method: Composition-based stats. Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 7/134 (5%) Query: 3 CPVCHQ--GEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKE--ESDAFMAQVK 58 C +C G + + +G + + G C C + + + +D + A Sbjct: 6 CYICGAPRGLTYFEGRSETISIKGMDRRVDELSGWECKVCGDGFWDPDNDSTDRYDAAKD 65 Query: 59 AFRASVNAETVAPEFIVKVRKKLSLTQKEASEIF-GGGVNAFSRYEKGNAQPHPSTIKLL 117 A + + + R+KL LTQKEA E+ GGG NAFSRYE+G + L+ Sbjct: 66 ALTLAARKMI--GTEMKRTRRKLHLTQKEAVELLSGGGHNAFSRYERGELLAPKPLVLLM 123 Query: 118 RVLDKHPELLNEIR 131 R+LD+HP LL + + Sbjct: 124 RLLDRHPHLLADAK 137 >UniRef50_C3JZL6 Putative uncharacterized protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3JZL6_PSEFS Length = 260 Score = 112 bits (279), Expect = 5e-24, Method: Composition-based stats. Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 2/123 (1%) Query: 2 KCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 CP+C +G + + P G K + C C + + + + AF Sbjct: 17 TCPICGEGGLHETAHNRPVEIDGHKGFVYSRSS-ECDVCGCVQASPTQLRDNLRAMTAFE 75 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 + + + R KL LTQ EA++IFGGG N+F++YE + + L+R+ Sbjct: 76 KEAAGRLTGKQ-MREARTKLGLTQVEAAKIFGGGKNSFAKYEADDVTQSEAMDNLVRLAI 134 Query: 122 KHP 124 + P Sbjct: 135 EVP 137 >UniRef50_Q4KHV0 Putative uncharacterized protein n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KHV0_PSEF5 Length = 160 Score = 109 bits (271), Expect = 4e-23, Method: Composition-based stats. Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 13/136 (9%) Query: 2 KCPVCHQ--GEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDA----FMA 55 +C C G + + +R + L G+ G C C E + ++ Sbjct: 5 QCYSCGAPTGMLAFEQRSELIDYRHLQRHLHGLAGWECQECGEIEFDAASAERYAAAGDQ 64 Query: 56 QVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIF-GGGVNAFSRYEKGNAQPHPSTI 114 ++ +R V A+ + ++R+KL L+QKEA + GGG NAFSRYE+G Sbjct: 65 LLEDYRQIVAAD------MKRIRRKLHLSQKEAVRLLSGGGHNAFSRYERGEVGAPQPLY 118 Query: 115 KLLRVLDKHPELLNEI 130 L+R+LD+HP+L+ ++ Sbjct: 119 MLMRLLDRHPQLMKDV 134 >UniRef50_Q1N9W5 Transcriptional regulator, XRE family protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N9W5_9SPHN Length = 137 Score = 109 bits (271), Expect = 4e-23, Method: Composition-based stats. Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 8/122 (6%) Query: 11 MVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRASVNAETVA 70 + ++ F + + G Y +SI + E+ + +A+ Sbjct: 14 LRRDVRKQVVAFGSLSRAV-DVPGWYPDDESDSIHSGEDLAESDRAFRDLKAA------Y 66 Query: 71 PEFIVKVRK-KLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNE 129 + ++RK KL LTQ+EA + GGG AF +YE G+ P + + L+ +LD+HPE + Sbjct: 67 GAHVRRIRKDKLKLTQEEAGRLIGGGRRAFQKYESGSTPPSDAAVGLIELLDRHPEEVEF 126 Query: 130 IR 131 +R Sbjct: 127 LR 128 >UniRef50_D0SHI7 Transcriptional regulator n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SHI7_ACIJO Length = 193 Score = 109 bits (271), Expect = 5e-23, Method: Composition-based stats. Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 2/126 (1%) Query: 2 KCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 C +C +G ++ F+G+ + H L C C ++ E + + Sbjct: 5 TCVMCDEGLLIKKTVIDNVDFKGQVLKVPNTH-LECNLCGCIELDNEYMKVNNRALNIEK 63 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 + I ++R+ L L+Q EAS IFGGG AFS+YE + S L+ + Sbjct: 64 KKA-LDLFTGSEIKEIREGLRLSQTEASAIFGGGKVAFSKYENDDVIQSKSMNTLIGAAN 122 Query: 122 KHPELL 127 + P+LL Sbjct: 123 RIPDLL 128 >UniRef50_A4XM96 Helix-turn-helix domain protein n=2 Tax=Clostridia RepID=A4XM96_CALS8 Length = 341 Score = 103 bits (256), Expect = 2e-21, Method: Composition-based stats. Identities = 29/119 (24%), Positives = 59/119 (49%), Gaps = 5/119 (4%) Query: 3 CPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKE-ESDAFMAQVKAFR 61 CP C + + K++ ++G + ++ H +C C+ ++ + E++ + +R Sbjct: 7 CPECKKHVEIKVEKNLVKEYKGVQVNVEE-HAPHCSECDTELLVPDIENENLKRLYQRYR 65 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVL 120 + PE I K+R+K L+Q+E +I G G +RYE+G P S +L+++ Sbjct: 66 ELTG--LITPEEIQKIREKYGLSQRELGQILGWGKMTINRYERGAL-PSKSHSDILKLI 121 >UniRef50_B2AJ70 Putative uncharacterized protein n=1 Tax=Cupriavidus taiwanensis RepID=B2AJ70_CUPTR Length = 252 Score = 102 bits (254), Expect = 4e-21, Method: Composition-based stats. Identities = 30/128 (23%), Positives = 50/128 (39%), Gaps = 2/128 (1%) Query: 3 CPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRA 62 C VC +G + S +G + + +C C + + V R Sbjct: 7 CDVCGEGHVASVYGQNEIEHKGATFSVPFVMS-HCEECGSDYASASDMRQNKRAVVELRK 65 Query: 63 SVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 + + + +R L + +A +IFGGG AFS+YE + S KL+RV + Sbjct: 66 KLECLLTG-QEVHAIRVGAGLKKVQAVKIFGGGPVAFSKYEADDVTQSASMDKLIRVAAQ 124 Query: 123 HPELLNEI 130 P L + Sbjct: 125 VPTALAWL 132 >UniRef50_A4E6W9 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6W9_9ACTN Length = 167 Score = 81.3 bits (199), Expect = 9e-15, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 3/121 (2%) Query: 6 CHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRASVN 65 C + EM + +RG K +KGI C C M E+ + + A + Sbjct: 3 CGK-EMQFTTAPMTEIYRGEKITVKGIEHYVC-ECGNDEMTTTEATKLAHALASQYAKAH 60 Query: 66 AETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPE 125 E ++P I +R L LTQ E + G SR+E G +Q + L++++ PE Sbjct: 61 -ELLSPSDIKDLRSDLGLTQHEFESLLGVSKPTASRWENGASQQSITANNLMKLIRDVPE 119 Query: 126 L 126 + Sbjct: 120 V 120 >UniRef50_C8PU52 Transcriptional regulator, XRE family n=2 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PU52_9GAMM Length = 110 Score = 78.6 bits (192), Expect = 6e-14, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 40/85 (47%) Query: 46 NKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKG 105 + + + K+ + +VR+K L+Q + ++ G VN +E+G Sbjct: 22 DPDAIVIKDSLAKSLSQLREGRYAPVSEVSQVRQKTGLSQSQFAKSLGISVNTLKSWEQG 81 Query: 106 NAQPHPSTIKLLRVLDKHPELLNEI 130 +P S LL++L K PEL++EI Sbjct: 82 QRKPSGSAQVLLKLLGKKPELIDEI 106 >UniRef50_Q1YRR7 Helix-turn-helix motif protein n=2 Tax=gamma proteobacterium HTCC2207 RepID=Q1YRR7_9GAMM Length = 93 Score = 78.2 bits (191), Expect = 8e-14, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 2/86 (2%) Query: 47 KEESDAFMAQVKAFRASVNAETVAPEF--IVKVRKKLSLTQKEASEIFGGGVNAFSRYEK 104 + A V A + A+ PE ++ VRK+L +Q +++ G V +E+ Sbjct: 6 SDAGQALSDDVLGINAGMPAKIWFPEQLLVIAVRKQLQKSQPGFAKLLGIPVGTLRDWEQ 65 Query: 105 GNAQPHPSTIKLLRVLDKHPELLNEI 130 G QP + + L++V HPE+L + Sbjct: 66 GRKQPDSAAVTLIKVAQSHPEVLANL 91 >UniRef50_A0LH57 Transcriptional regulator, XRE family n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LH57_SYNFM Length = 167 Score = 77.1 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 33/136 (24%), Positives = 56/136 (41%), Gaps = 7/136 (5%) Query: 2 KCPVCHQGEMVSGIKDIPYTFRG-RKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAF 60 CP C E++ + G L C C E I++ S M + A Sbjct: 11 TCPTCGSTEIIFKRGHHHFLESGLENIHLSNADIWRCNACGEEIVSIPRSMELMKSI-AE 69 Query: 61 RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVL 120 + +++ I RK L + KE S++ G SR+E G+ +P S +L+R+ Sbjct: 70 SILLKPISLSGAEIRFFRKNLGMKIKEFSQLLGVDRVTVSRWENGHEKPSKSADRLIRLT 129 Query: 121 ----DKHPE-LLNEIR 131 K PE ++ ++R Sbjct: 130 YAVEAKVPEAVMEQLR 145 >UniRef50_C6LB00 Toxin-antitoxin system, antitoxin component, Xre family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LB00_9FIRM Length = 326 Score = 77.1 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 55/129 (42%), Gaps = 7/129 (5%) Query: 7 HQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRASVNA 66 + E+ + + + F+ K LYC EE M++++ ++K Sbjct: 2 EEHEVKTVLAEEQAVFKDVKIDYDAY-YLYCDAAEELYMDEQQMKDNDVRLKDAYRKKEG 60 Query: 67 ETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPE- 125 + E I +R+K ++Q++ S + G G +RYE + +LR L + PE Sbjct: 61 LLTSSE-ISGIREKYGISQRDLSTLLGWGGKTITRYESHQV-QDRAHDTILRKLAQDPEW 118 Query: 126 ---LLNEIR 131 LL+E + Sbjct: 119 FLALLDEAK 127 >UniRef50_A4J0H7 Putative uncharacterized protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J0H7_DESRM Length = 334 Score = 75.1 bits (183), Expect = 6e-13, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 57/118 (48%), Gaps = 6/118 (5%) Query: 3 CPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHG--LYCVHCEESIMNKEESDAFMAQVKAF 60 C C + E++ K+ + + + ++ I+G L+C C + ++E +A Sbjct: 6 CGNCEK-EVLGITKEDYFEYP-VRNLVYKINGKRLFCPDCGNELFHREYDEANQRAAFDL 63 Query: 61 RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLR 118 ++P+ I +R+K LTQ+E S + G G SRYE+G + P + ++++ Sbjct: 64 YRKETG-IISPKEIKDIREKYELTQREFSYLLGFGEITVSRYERG-SLPTIAQSQIIK 119 >UniRef50_UPI0001907A5F XRE family transcriptional regulator n=1 Tax=Rhizobium etli GR56 RepID=UPI0001907A5F Length = 79 Score = 72.8 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 1/55 (1%) Query: 77 VRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEIR 131 VR S+ K + + GGG NAFSRYE G P P+ + L R+LD+HP+ + E+R Sbjct: 24 VRNSASIRLKHRA-LTGGGHNAFSRYETGKVSPPPAVVNLFRMLDRHPDDIKELR 77 >UniRef50_A6TLM4 Putative uncharacterized protein n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TLM4_ALKMQ Length = 338 Score = 72.0 bits (175), Expect = 6e-12, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 53/129 (41%), Gaps = 4/129 (3%) Query: 3 CPVCHQGEMVSGIK-DIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 C +C + V ++ T++ ++ YC + +E + +E A +K Sbjct: 11 CLMCMEEHGVDTVEVIDEETYKSKEVSFNA-TYEYCANADEYLETEEMIKANSLMMKDAY 69 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 + E I+ +R K L+QK+ SEI G +RYE + +LR ++ Sbjct: 70 RKKVGLLTSDE-IINIRAKYGLSQKDFSEILDWGKATITRYENHQV-QDRAHDDVLRKIN 127 Query: 122 KHPELLNEI 130 P+ E+ Sbjct: 128 SDPKWFLEM 136 >UniRef50_A2RP91 Predicted helix-turn-helix containing protein n=4 Tax=Enterobacteriaceae RepID=A2RP91_SALTI Length = 96 Score = 72.0 bits (175), Expect = 6e-12, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 34/58 (58%) Query: 74 IVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEIR 131 + +R K L Q E +++ G + +E+ P S++KLLRV++KHP++LN R Sbjct: 37 VKAIRTKAKLKQNEFAQVVGVSPSLVQAWEQQKRTPTGSSLKLLRVIEKHPDMLNLFR 94 >UniRef50_C5CDA8 Transcriptional regulator, XRE family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CDA8_KOSOT Length = 331 Score = 71.7 bits (174), Expect = 8e-12, Method: Composition-based stats. Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 6/123 (4%) Query: 1 MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAF 60 MKCP C + E+ +F+GR+ L + C CE+S ++ + +V Sbjct: 1 MKCPKCGR-ELYKKQIREKQSFKGREVEL-SYNVFVCPQCEDSFVDSASLEQAWKKVWDD 58 Query: 61 RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVL 120 N +PE + + R KL LT +E S+I G + S+ E G+ + S LL++ Sbjct: 59 YEKEN-HIPSPETLREARMKLKLTAEELSKIIGRTKSLISKLENGSRRLSES---LLKIY 114 Query: 121 DKH 123 + H Sbjct: 115 ENH 117 >UniRef50_C6Q836 Transcriptional regulator, XRE family n=1 Tax=Thermoanaerobacter mathranii subsp. mathranii str. A3 RepID=C6Q836_9THEO Length = 194 Score = 70.5 bits (171), Expect = 1e-11, Method: Composition-based stats. Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 5/129 (3%) Query: 3 CPVCHQGEMVSGIKDIPY-TFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 CPVC + + I+ T RG + C C E + ++E + + +V Sbjct: 5 CPVCGKEQETKVIEKEEISTVRGDEIKALAKI-RVCSVCGEELFDEELEEENIQRVYDIY 63 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 + ++P+ I +R+ L+Q+ +++ G G + +RYE G P S ++ +L Sbjct: 64 RKKHG-ILSPDEIRNIRESYRLSQRAFAKLLGIGEASIARYETGAL-PEKSLSNMIMLL- 120 Query: 122 KHPELLNEI 130 K PE + ++ Sbjct: 121 KDPENMEKL 129 >UniRef50_A5G3N3 Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G3N3_GEOUR Length = 295 Score = 69.7 bits (169), Expect = 3e-11, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 50/126 (39%), Gaps = 2/126 (1%) Query: 1 MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAF 60 M C C + E + ++ T VL + C C E +S + A Sbjct: 1 MICTNCFEAEYRAAKTELTITVNDESHVLHDLDCEICPACGEVTFTHAQSLEIDKKRIAM 60 Query: 61 RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLL-RV 119 + + PE + +R+ L + E ++ G N + R+E+G PS L+ + Sbjct: 61 EFGL-KPLLTPEQLKTLRRVLDMKLDEICDLLQIGRNTYGRWERGEVAITPSMNLLVHNL 119 Query: 120 LDKHPE 125 ++K P+ Sbjct: 120 IEKVPD 125 >UniRef50_UPI0000382ADF COG2944: Predicted transcriptional regulator n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000382ADF Length = 198 Score = 69.0 bits (167), Expect = 5e-11, Method: Composition-based stats. Identities = 20/122 (16%), Positives = 39/122 (31%), Gaps = 2/122 (1%) Query: 3 CPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRA 62 C C + ++ G+K + + C C + A Sbjct: 6 CQACEGISVSERVEPFVVERSGKKVTFEDRR-MVCAACGNVSYRGSQISQHEFAHAAAVR 64 Query: 63 SVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 + ++ E + +R K L Q + I G ++R+E+G + +R L Sbjct: 65 ELEG-LLSAEELCAIRLKYKLRQTDMELILSTGPKTWTRWERGKVPQSKVADRYIRALAS 123 Query: 123 HP 124 P Sbjct: 124 DP 125 >UniRef50_C2HQE2 Phage-like transcriptional regulator protein n=5 Tax=Lactobacillus RepID=C2HQE2_LACAC Length = 136 Score = 68.2 bits (165), Expect = 7e-11, Method: Composition-based stats. Identities = 27/115 (23%), Positives = 52/115 (45%), Gaps = 5/115 (4%) Query: 17 DIPYTFRGRKTVLKGIHGLYCVHCEESIMNKE-ESDAFMAQVKAFRASVNAETVAPEFIV 75 Y RG + + + E I + E + A ++ FR + V+PE + Sbjct: 17 TNTYDIRGHEIEITA-PARFDDRTHEVIPDLELDDQAVKLALEKFRKIYD--VVSPEQMK 73 Query: 76 KVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEI 130 +RKK L+Q++ +++ G + + YE G P +LL++L K +++ E Sbjct: 74 ALRKKWHLSQRKFAKVLGWSSSTVALYEAGAV-PTNGNNRLLKILIKDDKVMKEF 127 >UniRef50_B0KAX5 Transcriptional regulator, XRE family n=5 Tax=Thermoanaerobacter RepID=B0KAX5_THEP3 Length = 193 Score = 67.0 bits (162), Expect = 2e-10, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 55/128 (42%), Gaps = 3/128 (2%) Query: 3 CPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRA 62 CPVC + I+ + + C C E + ++E + + +V Sbjct: 5 CPVCGIEQETEIIEKEEASNVRGDEIKALARIRVCSVCGEELFDEELEEGNIKRVYDIYR 64 Query: 63 SVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 + ++ + I +R+ L+Q+ +++ G G + +RYE G P S LL +L K Sbjct: 65 EKHG-ILSTKEIRNIRENYGLSQRAFAKLLGIGEASIARYETGAL-PEKSLSNLLMLL-K 121 Query: 123 HPELLNEI 130 P+ + ++ Sbjct: 122 DPKNMEKL 129 >UniRef50_D2C8D5 Transcriptional regulator, XRE family n=1 Tax=Thermotoga naphthophila RKU-10 RepID=D2C8D5_THENR Length = 330 Score = 67.0 bits (162), Expect = 2e-10, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 53/129 (41%), Gaps = 5/129 (3%) Query: 3 CPVCHQ-GEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 C C++ + +K+ Y RG + +K C C + + D + + Sbjct: 13 CENCNKFVDYEVILKEDIYNVRGEEIKIKAKI-PVCKVCGGELFDIHLEDENLREAYRMY 71 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 A + + PE I +R+ L+Q+ + I G G +RYE G + P + L++ Sbjct: 72 AKKHGLVL-PEEIKNIRENYGLSQETFARILGIGRATLARYENG-SLPSEAISSLIK-RS 128 Query: 122 KHPELLNEI 130 K P L + Sbjct: 129 KDPNFLLSL 137 >UniRef50_B6IPE3 DNA-binding protein, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6IPE3_RHOCS Length = 110 Score = 67.0 bits (162), Expect = 2e-10, Method: Composition-based stats. Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 1/81 (1%) Query: 48 EESDAFMAQVKAF-RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGN 106 E++ A + ++ A+V + +VR++L LTQ+E + FG + +E+ Sbjct: 19 EDAAALVDSLRGLGVAAVRRTAPPAPDVRRVRERLGLTQREFAATFGIELGTLRNWEQNR 78 Query: 107 AQPHPSTIKLLRVLDKHPELL 127 P LLRVL++HPE++ Sbjct: 79 NPPDAPGRLLLRVLERHPEIV 99 >UniRef50_Q2L0I8 Putative DNA-binding protein n=2 Tax=Proteobacteria RepID=Q2L0I8_BORA1 Length = 79 Score = 67.0 bits (162), Expect = 2e-10, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 33/69 (47%) Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 A++ A I + R ++ L Q E +++ G V +E+G P + LLRV Sbjct: 4 AALPARRWPASRISEARNRVGLPQAEFADLLGVSVRTLQDWEQGRRNPSGAAQTLLRVAI 63 Query: 122 KHPELLNEI 130 HPE L ++ Sbjct: 64 LHPETLRDL 72 >UniRef50_A6Q854 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q854_SULNB Length = 109 Score = 66.3 bits (160), Expect = 3e-10, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 39/76 (51%) Query: 53 FMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPS 112 ++K + T+ I +RK L L+Q +++ +++ ++E+G P S Sbjct: 26 TKKELKRMGVEIAPVTITAGEIKIIRKSLKLSQSVFAKLLNVSLSSVRQWEQGIRTPSGS 85 Query: 113 TIKLLRVLDKHPELLN 128 T+ LL +L + PELLN Sbjct: 86 TMVLLELLQREPELLN 101 >UniRef50_D2QQQ8 Transcriptional regulator, XRE family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QQQ8_9SPHI Length = 333 Score = 66.3 bits (160), Expect = 3e-10, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 51/130 (39%), Gaps = 5/130 (3%) Query: 1 MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAF 60 M P+ M + FR + H C E ++ QV Sbjct: 1 MNSPLTGS-PMELRTRPETRFFRREPFQIVH-HFYLCEETGEEFTDEHTDSVNQKQVLN- 57 Query: 61 RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVL 120 + V P+ I +R K L+ + +E+ G GVN++ +YE G P S +L+++ Sbjct: 58 QYRVAHNLPFPDEIAAIRTKYGLSASKMAEVLGFGVNSYRQYETGEI-PSDSNARLIQLA 116 Query: 121 DKHPELLNEI 130 K PE ++ Sbjct: 117 -KDPEEFKKL 125 >UniRef50_UPI0001AF457D hypothetical protein Psyrpo1_28742 n=1 Tax=Pseudomonas syringae pv. oryzae str. 1_6 RepID=UPI0001AF457D Length = 239 Score = 66.3 bits (160), Expect = 3e-10, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 51/140 (36%), Gaps = 16/140 (11%) Query: 2 KCPVCHQGEMVSGI------KDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMA 55 +CP+C + + + +P G L + C C E + E A Sbjct: 4 QCPICASLNALQRVKYIFIARPMP----GHSVEL-ELPAFECCVCGEQVETPELVVQNSA 58 Query: 56 QVKAFR-----ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPH 110 + + +++ + ++R ++QKE S + G N+ S+YE + P Sbjct: 59 MISEAKLAWLADHESSDRAIGYLVKELRNNFGVSQKEFSIMTGATGNSISKYESHSIVPS 118 Query: 111 PSTIKLLRVLDKHPELLNEI 130 KL VL K E + Sbjct: 119 ALARKLFTVLAKSKESRQIL 138 >UniRef50_A1U7F0 Virulence gene repressor RsaL n=4 Tax=Proteobacteria RepID=A1U7F0_MARAV Length = 95 Score = 65.9 bits (159), Expect = 4e-10, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 34/64 (53%) Query: 67 ETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPEL 126 E P +R KL+++Q + + G V +E+G +P + LLR+ ++HPE+ Sbjct: 31 ELSDPSPPKVIRLKLNMSQSAFAGLMGVSVRTLQDWEQGRREPQGPAVALLRIAEQHPEV 90 Query: 127 LNEI 130 NE+ Sbjct: 91 FNEL 94 >UniRef50_Q39YW3 Transcriptional regulator, XRE family n=10 Tax=Proteobacteria RepID=Q39YW3_GEOMG Length = 103 Score = 65.5 bits (158), Expect = 5e-10, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 43/97 (44%), Gaps = 7/97 (7%) Query: 41 EESIMNKEESDAF--MAQVKAFRASVNAE-----TVAPEFIVKVRKKLSLTQKEASEIFG 93 +E + ++ ++A R + T+ I R+K+ L+Q+E +++ G Sbjct: 4 DEKELLARDAKRNIGEELLQAVRDIKAGKVGRVSTLEISPIAAARQKIGLSQREFAKMLG 63 Query: 94 GGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEI 130 + +E+G P + L+ + K PE++ E+ Sbjct: 64 VSLRTLQEWEQGRRTPSGAAKSLITIAIKKPEVIKEL 100 >UniRef50_C0XBS2 Phage associated protein n=1 Tax=Lactobacillus gasseri JV-V03 RepID=C0XBS2_9LACO Length = 131 Score = 65.1 bits (157), Expect = 6e-10, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 48/114 (42%), Gaps = 3/114 (2%) Query: 17 DIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVK 76 + +G++ + + + I + E D + + V P I K Sbjct: 9 TNTFDIKGKEITVTD-PARFEKNTYRLINDNEFDDQAVEIAQEIYRQKYG-FVGPADIKK 66 Query: 77 VRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEI 130 +RKK L+Q++ + + G + + YE G P +LL VL K+P+++ + Sbjct: 67 LRKKWKLSQRQLASVLGWSPSTIALYEVGEI-PTVGNNRLLNVLIKNPQVMKDF 119 >UniRef50_C2D085 Transcriptional regulator phage-related n=1 Tax=Lactobacillus brevis subsp. gravesensis ATCC 27305 RepID=C2D085_LACBR Length = 114 Score = 64.7 bits (156), Expect = 8e-10, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 47/112 (41%), Gaps = 3/112 (2%) Query: 10 EMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRASVNAETV 69 +M + D YT RG K ++ ++ K + A A+R + + Sbjct: 6 KMDVKLIDEVYTIRGEKIAIRSSARFDSQTNKQVFDEKLDDQAVNEAFDAYRVKHD--VI 63 Query: 70 APEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 +P+ I +R K L Q++ + + G + YE G P S ++L+ L+ Sbjct: 64 SPDRIKALRHKYGLNQRDFATLLGWSPTTIATYETGAL-PSKSNDRILKSLE 114 >UniRef50_B8G1P7 Helix-turn-helix domain-containing protein n=2 Tax=Desulfitobacterium hafniense RepID=B8G1P7_DESHD Length = 332 Score = 64.3 bits (155), Expect = 1e-09, Method: Composition-based stats. Identities = 29/131 (22%), Positives = 54/131 (41%), Gaps = 9/131 (6%) Query: 3 CPVCH-QGEMVSGIKDIPYTFRGRKT-VLKGIHGLYCVHCEESIMNKE-ESDAFMAQVKA 59 C +C + E K ++ RG + + I C C + ++E ++ +A Sbjct: 5 CDICQCEQETQVDNKRETFSVRGEEIETVSDIR--ICSICRNELFDEELDTKNLERVYQA 62 Query: 60 FRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRV 119 +R N ++P I ++R+ + + + + + G F RYE G +LLR Sbjct: 63 YRNKHN--LLSPFEIKQIRESIG-SGRTVASLLGWSQATFVRYEGGAIPSASHHEQLLR- 118 Query: 120 LDKHPELLNEI 130 L P LN + Sbjct: 119 LKNDPTYLNYL 129 >UniRef50_A3TSK6 Putative uncharacterized protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TSK6_9RHOB Length = 76 Score = 64.3 bits (155), Expect = 1e-09, Method: Composition-based stats. Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 3/54 (5%) Query: 81 LSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHP---ELLNEIR 131 + LTQ EA I GGG AF +YEKG P + + LL +L P E+L +R Sbjct: 1 MRLTQSEAGNIVGGGPRAFQKYEKGVMPPSDAAVGLLEILKDDPGKIEILKRLR 54 >UniRef50_A1BCL4 Helix-turn-helix domain protein n=2 Tax=Chlorobium/Pelodictyon group RepID=A1BCL4_CHLPD Length = 335 Score = 64.0 bits (154), Expect = 2e-09, Method: Composition-based stats. Identities = 29/132 (21%), Positives = 56/132 (42%), Gaps = 9/132 (6%) Query: 1 MKCPVCH-QGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQV-K 58 MK P+ + ++ + + + + H +C ++ + E + + QV Sbjct: 1 MKSPMSGREMTLIKEARTMIFRKKEYPVC---YHVYHCNDTQQQFTSTELDEINLVQVYN 57 Query: 59 AFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLR 118 +R N PE I +R+ L+ + +E+ G G N + YE+G P S +L++ Sbjct: 58 QYRDEHN--LPFPEEIRSIREAYGLSAAKMAEVLGLGTNTYRNYEQGEV-PSESNARLIQ 114 Query: 119 VLDKHPELLNEI 130 V PE +I Sbjct: 115 VAQD-PEEFRKI 125 >UniRef50_A5G7I8 Helix-turn-helix domain protein n=2 Tax=Proteobacteria RepID=A5G7I8_GEOUR Length = 130 Score = 63.6 bits (153), Expect = 2e-09, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 28/59 (47%) Query: 72 EFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEI 130 + R L+Q +++ G V +E+G P + LL+V +HPE+L E+ Sbjct: 70 ALVATARAATGLSQAAFAKLLGVSVRTLQEWEQGRKMPSGAAATLLKVASRHPEVLQEL 128 >UniRef50_C6HUS9 Helix-turn-helix domain protein n=2 Tax=Leptospirillum RepID=C6HUS9_9BACT Length = 102 Score = 63.6 bits (153), Expect = 2e-09, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 31/55 (56%) Query: 75 VKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNE 129 +VR+ L+Q E +EI G V +E+G +P + LL++ +K+P LL E Sbjct: 44 ARVRQATGLSQVEFAEILGVSVRTLQDWEQGRRKPSGAAATLLKIAEKNPALLRE 98 >UniRef50_C8W2H4 Putative phage-associated protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W2H4_DESAS Length = 339 Score = 63.2 bits (152), Expect = 3e-09, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 48/133 (36%), Gaps = 12/133 (9%) Query: 3 CPVCHQG-EMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIM----NKEESDAFMAQV 57 C C + + K I +G + YC C E+I + E + Sbjct: 7 CYYCDENVSFIIQEKIITENIKGIEFDYVANIA-YCKECGEAIYIAELDDENVKRANKKY 65 Query: 58 KAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLL 117 + + + I + K ++ QK +++ G G +RY +G + +L Sbjct: 66 RQLH-----DIIQVNEIEEFLNKYNIGQKPLAKLLGWGETTITRYLQGLTPSREYSDRLR 120 Query: 118 RVLDKHPELLNEI 130 +L+ P + E+ Sbjct: 121 ELLND-PVKMREL 132 >UniRef50_C0GQR0 Transcriptional regulator, XRE family n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GQR0_9DELT Length = 272 Score = 62.4 bits (150), Expect = 4e-09, Method: Composition-based stats. Identities = 25/117 (21%), Positives = 36/117 (30%), Gaps = 4/117 (3%) Query: 2 KCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 KCP C M F+G G C C + + + Sbjct: 5 KCPACSSL-MEFKELKKKKVFKGLDIEYSGNF-FVCPGCSLEAGDAGSAGEVQRAIADAY 62 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLR 118 + I ++R LTQ++ S GV + R+E G S LLR Sbjct: 63 REKAGLLTG-QEIRELRDSKGLTQEQLSRALNVGVASIKRWESGMV-QSRSMDGLLR 117 >UniRef50_C6VTF5 Helix-turn-helix domain-containing protein n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VTF5_DYAFD Length = 328 Score = 62.4 bits (150), Expect = 4e-09, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 51/127 (40%), Gaps = 5/127 (3%) Query: 1 MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAF 60 MK P+ + ++ FR + + H C E + + + QV Sbjct: 1 MKSPITGKEMLLRHEAS-KVAFRKEEFSIVS-HYYECGDSGERFTDDRLDELSIVQVHNQ 58 Query: 61 RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVL 120 P+ I ++R++ ++ + SEI G G N++ YE G P + +L+ + Sbjct: 59 YREKYG-IPFPDEIRRIRERYGISASKMSEILGLGANSYRLYESGEV-PSVAIGRLIMSI 116 Query: 121 DKHPELL 127 ++PE Sbjct: 117 -RNPETF 122 >UniRef50_C2CWL5 Prophage ps3 protein 01 n=1 Tax=Gardnerella vaginalis ATCC 14019 RepID=C2CWL5_GARVA Length = 369 Score = 62.4 bits (150), Expect = 4e-09, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 48/121 (39%), Gaps = 3/121 (2%) Query: 3 CPVCHQG-EMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 C C E + + + +G++ G +C C ++ E DA + + Sbjct: 8 CEECRNNVEYSTKSVPMTASIKGKQYSYTGTEA-HCKECGSAVYVPEIIDANLRALYDEY 66 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 N + + I ++ K S+ ++ S + G G FSR+ G+ + LLR+ + Sbjct: 67 RKEN-NIIPLDKINEIPAKYSIGKRPLSLLLGWGEQTFSRFADGDIPSKQYSDILLRIYN 125 Query: 122 K 122 Sbjct: 126 D 126 >UniRef50_A3DFY7 Uncharacterized phage-associated protein-like protein n=6 Tax=Firmicutes RepID=A3DFY7_CLOTH Length = 332 Score = 62.4 bits (150), Expect = 4e-09, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 51/136 (37%), Gaps = 18/136 (13%) Query: 3 CPVC--------HQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFM 54 C C + +K Y + G+K + C C + + D + Sbjct: 8 CEECRRDVEYMVETATIKGKLKGEEYEYTGKKAI--------CTECGSEVYVADIEDENL 59 Query: 55 AQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTI 114 + N ++ E I+++ +K ++ ++ S + G G FSRY +G+ + Sbjct: 60 KALYDTYRQKNG-IISLEKILEIPQKYNIGKRPLSLLLGWGEMTFSRYCEGDMPTKQYSD 118 Query: 115 KLLRVLDKHPELLNEI 130 L ++ D P E+ Sbjct: 119 ILQKIYDD-PAYYKEL 133 >UniRef50_A7HHQ8 Helix-turn-helix domain protein n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HHQ8_ANADF Length = 157 Score = 62.0 bits (149), Expect = 6e-09, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 39/113 (34%), Gaps = 3/113 (2%) Query: 2 KCPVCHQGEMVSGIKDIPYTF-RGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAF 60 +C C + + + R T + C C E ++ + F + A Sbjct: 7 RCSRCGDTTLRDETETLSVKLPRSDVTASVAVPARRCPACGEVHLDGTLAQRFQ--LAAC 64 Query: 61 RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPST 113 +A E + +RK L L E + + S +E G A+P+ + Sbjct: 65 SELADAGVDTGEALRHMRKVLGLRAAELARLLDVTPETISHWETGKARPNRAA 117 >UniRef50_C8WN21 Transcriptional regulator, XRE family n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WN21_EGGLE Length = 306 Score = 61.6 bits (148), Expect = 7e-09, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 40/102 (39%), Gaps = 14/102 (13%) Query: 31 GIHGLYCVHCEESI-MNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEAS 89 I L C C SI + F +A+R + + PE IV +RKK +Q+ + Sbjct: 6 DIEHLICPKCGNSIGWAPLVDEGFDKLYRAYREKMG--IMQPEEIVALRKKYGFSQRVFA 63 Query: 90 EIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEIR 131 G+ + RYE G+ D H +LL R Sbjct: 64 AALDIGIASLQRYESGSLAS-----------DSHAQLLANAR 94 >UniRef50_Q2RPT5 Transcriptional regulator, XRE family n=3 Tax=Alphaproteobacteria RepID=Q2RPT5_RHORT Length = 98 Score = 61.6 bits (148), Expect = 8e-09, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 32/63 (50%) Query: 67 ETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPEL 126 AP + +R KL +TQ++ + FG VN +E+G QP + L V+D+ P+ Sbjct: 31 HIPAPIDVRAIRAKLGMTQEQFAGRFGFSVNTLRHWEQGKRQPEGPSRAYLLVIDRAPDA 90 Query: 127 LNE 129 + Sbjct: 91 VQN 93 >UniRef50_C8Q118 Transcriptional regulator, XRE family n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8Q118_9GAMM Length = 109 Score = 61.3 bits (147), Expect = 9e-09, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 36/87 (41%), Gaps = 2/87 (2%) Query: 43 SIMNKEESDAFMAQVKAFRASVNAETVAP--EFIVKVRKKLSLTQKEASEIFGGGVNAFS 100 E + V+ +A P ++ R+ + L+Q+E +EI G V Sbjct: 18 EFTGDELGALLLESVRQAKAGQGVVREQPIVNEAIEARQNVGLSQREFAEILGVSVRTLQ 77 Query: 101 RYEKGNAQPHPSTIKLLRVLDKHPELL 127 +E+G P + LL++ P++L Sbjct: 78 AWEQGKRYPSKAASVLLKIAKVEPQVL 104 >UniRef50_A8GWH9 Putative transcriptional regulator n=2 Tax=Rickettsia bellii RepID=A8GWH9_RICB8 Length = 97 Score = 60.9 bits (146), Expect = 1e-08, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 37/90 (41%), Gaps = 8/90 (8%) Query: 38 VHCEESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVN 97 E + + ++ A + + I+ +RK L L+Q + + + V Sbjct: 11 DIGAEILQSIKDIKAGKGLTQKIETKTD--------IIDIRKHLHLSQVDFAALMHINVR 62 Query: 98 AFSRYEKGNAQPHPSTIKLLRVLDKHPELL 127 +E+G +P I LL++ KHPE+ Sbjct: 63 TLQEWEQGRRRPRGPAISLLKIASKHPEIF 92 >UniRef50_A1VJ81 Helix-turn-helix domain protein n=11 Tax=Proteobacteria RepID=A1VJ81_POLNA Length = 201 Score = 60.5 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 6/88 (6%) Query: 47 KEESDAFMAQVKAFRASVNAETVAPEFIVKV------RKKLSLTQKEASEIFGGGVNAFS 100 E + F + A + A A +V + R K+ ++Q E + + G V Sbjct: 111 DAEMEQFQNDLLASVRQMKAGKAARTTVVALTPAADARAKVGMSQSEFAALLGVSVRTLQ 170 Query: 101 RYEKGNAQPHPSTIKLLRVLDKHPELLN 128 +E+G +P + LLR+ + PE + Sbjct: 171 DWEQGRREPSGAAKTLLRIAARTPEAVR 198 >UniRef50_A6W266 Helix-turn-helix domain protein n=2 Tax=Gammaproteobacteria RepID=A6W266_MARMS Length = 96 Score = 60.5 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 32/88 (36%), Gaps = 7/88 (7%) Query: 45 MNKEESDAFMAQVKAFRASVNAETVAPE-------FIVKVRKKLSLTQKEASEIFGGGVN 97 MN + + V+ + + A + +R K L+Q + + G Sbjct: 1 MNDGMFNELLESVQQADNIIKGQATATRITEFADPEVKAIRTKTGLSQSRFANLLGVSKR 60 Query: 98 AFSRYEKGNAQPHPSTIKLLRVLDKHPE 125 +E+G P LL+++D PE Sbjct: 61 TLENWEQGRRHPTGPARALLKIVDADPE 88 >UniRef50_B2UKR2 Transcriptional regulator, XRE family n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UKR2_AKKM8 Length = 147 Score = 60.1 bits (144), Expect = 2e-08, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 34/55 (61%) Query: 74 IVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLN 128 I ++RK ++QK+ + + G + ++E G +P + KLL +++KHPEL+N Sbjct: 92 IARLRKSQGMSQKDFAAVLGVSPSTLVKWEHGLRRPCGPSAKLLDLIEKHPELIN 146 >UniRef50_Q5P4X5 DNA-binding protein n=8 Tax=Proteobacteria RepID=Q5P4X5_AZOSE Length = 95 Score = 60.1 bits (144), Expect = 2e-08, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 32/59 (54%) Query: 71 PEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNE 129 P + +R K+ +TQ++ + FG +E+G+ PH + LL V+D++P + E Sbjct: 33 PVDVKALRAKVGMTQEQFAARFGFSTATLRHWERGDRTPHGPALVLLNVIDRNPAAVIE 91 >UniRef50_Q7N0B1 Similar to unknown protein n=6 Tax=Enterobacteriaceae RepID=Q7N0B1_PHOLL Length = 98 Score = 60.1 bits (144), Expect = 2e-08, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 33/57 (57%) Query: 74 IVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEI 130 + +R+ L Q E +E G + +E+ P S++KLL++L+++P L+NE+ Sbjct: 39 VKNLRETFGLKQSEFAEAVGVSTSLIQSWEQHRRIPSGSSLKLLKMLERNPALINEL 95 >UniRef50_Q2IEG7 Transcriptional regulator, XRE family n=1 Tax=Anaeromyxobacter dehalogenans 2CP-C RepID=Q2IEG7_ANADE Length = 104 Score = 60.1 bits (144), Expect = 2e-08, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 4/84 (4%) Query: 48 EESDAFMAQVKAF-RASVNAETVAP---EFIVKVRKKLSLTQKEASEIFGGGVNAFSRYE 103 E++ AF A + V + AP + ++ VR ++ ++Q + I +E Sbjct: 19 EDAIAFHAGDRQLTVRDVELKPPAPMGAKEVLAVRTRMRVSQAAFARILNVSPRTVQAWE 78 Query: 104 KGNAQPHPSTIKLLRVLDKHPELL 127 +P + +KLL V HPE+L Sbjct: 79 TDARRPSDAALKLLAVAKAHPEVL 102 >UniRef50_Q3B427 Transcriptional regulator, XRE family n=6 Tax=Bacteria RepID=Q3B427_PELLD Length = 102 Score = 59.7 bits (143), Expect = 3e-08, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 31/57 (54%) Query: 71 PEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELL 127 P + VR+K LTQ+ + FG V +E+G+ +PH + LL ++ K P+ + Sbjct: 33 PIDVKVVREKTGLTQERFAAAFGISVATLRHWERGDRKPHGPALVLLDLVRKAPDTV 89 >UniRef50_A7HUI5 Helix-turn-helix domain protein n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HUI5_PARL1 Length = 102 Score = 59.7 bits (143), Expect = 3e-08, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 38/72 (52%) Query: 58 KAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLL 117 + + V TVAP + K RK L +TQ + + + G V+ ++E+G QP + L+ Sbjct: 20 RGGKTGVRVHTVAPVDVKKARKALKMTQPDFARLVGTSVSGLQKWEQGKRQPGGAARTLI 79 Query: 118 RVLDKHPELLNE 129 ++ + PE + + Sbjct: 80 TLIMRAPEAVRD 91 >UniRef50_B0BVA4 Transcriptional repressor n=9 Tax=spotted fever group RepID=B0BVA4_RICRO Length = 142 Score = 59.7 bits (143), Expect = 3e-08, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 31/57 (54%) Query: 74 IVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEI 130 + + R KL LTQ++ + FG V +E+G P + LL++++K P ++ + Sbjct: 83 VHEARDKLKLTQQQFATTFGVSVATLRNWEQGRRLPTGAAKLLLKIIEKEPNVVKRV 139 >UniRef50_B0P3V7 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P3V7_9CLOT Length = 357 Score = 59.7 bits (143), Expect = 3e-08, Method: Composition-based stats. Identities = 19/122 (15%), Positives = 45/122 (36%), Gaps = 5/122 (4%) Query: 3 CPVCHQGEMVSGI--KDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAF 60 C C + + I + + + + + +G C +C+ + +D +++ Sbjct: 28 CSKCRK-RVSYKIFKRPVKVKIKDMELEYEEYYG-ICDNCKSELFVPGVTDQNEERIEEL 85 Query: 61 RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVL 120 E I K+ K ++ ++ S++ G G +RY G + L +L Sbjct: 86 YRKRKNLITISE-IKKILNKYNIEKRPLSKLLGMGELTITRYMDGQLPSKKYSDYLYEIL 144 Query: 121 DK 122 + Sbjct: 145 ND 146 >UniRef50_C6N0S5 XRE family transcriptional regulator n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N0S5_9GAMM Length = 101 Score = 59.3 bits (142), Expect = 3e-08, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 32/57 (56%) Query: 74 IVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEI 130 + ++R+ L L++KE ++ FG +E+G+ PH S LL +L + P + +I Sbjct: 41 VREIRENLKLSRKEFADSFGFSSRTLQHWEQGDRVPHGSAKILLLLLQREPATIAKI 97 >UniRef50_C2EVP3 Phage associated protein n=10 Tax=Lactobacillus RepID=C2EVP3_9LACO Length = 307 Score = 59.3 bits (142), Expect = 4e-08, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 50/113 (44%), Gaps = 3/113 (2%) Query: 17 DIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVK 76 YT G + + L+ ++ +E D A++ + ++P+ + + Sbjct: 8 TTTYTINGHEYTVTA-PALF-DSNTNELIPDKELDDQAAEIARQQYRDEMGLLSPQELKQ 65 Query: 77 VRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNE 129 R K+ L+Q+ +E+ G N + YE G P + +LL+ L + ++L + Sbjct: 66 YRAKVGLSQRNLAELTGLSPNTIALYEAGAF-PTKANNRLLKSLIANDDVLQQ 117 >UniRef50_Q1DFX0 Conserved domain protein n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1DFX0_MYXXD Length = 168 Score = 58.9 bits (141), Expect = 5e-08, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 45/121 (37%), Gaps = 2/121 (1%) Query: 1 MKCPVCHQGEMVSGIKDIPYTFRG-RKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKA 59 MKC C + + + + G +L G+ C C E + + Sbjct: 1 MKCESCGGELLETRLDSYHFDESGLEDVILVGVIERRCEKCNEREVVIPRLKELHRTIAK 60 Query: 60 FRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRV 119 A+ N+ P + +RK L +Q + ++ A SR+E G + LLR+ Sbjct: 61 ALAAKNSLLT-PLEVRFLRKHLGFSQADFAKRINVRSEAVSRWETGAEEFSWHFELLLRL 119 Query: 120 L 120 + Sbjct: 120 M 120 >UniRef50_A9BHQ9 Helix-turn-helix domain protein n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BHQ9_PETMO Length = 339 Score = 58.9 bits (141), Expect = 5e-08, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 46/119 (38%), Gaps = 5/119 (4%) Query: 3 CPVCHQGEMVSGIKDIPYTFRGRKTVLK-GIHGLYCVHCEESIMNKE-ESDAFMAQVKAF 60 C C + IK + + ++ C C ++ E++ A + + Sbjct: 13 CEQCGKLVGYKTIKKKE-NYNVKNYPIEVERTVAICEECGAELLEPYYENENLKAAYRKY 71 Query: 61 RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRV 119 N V PE I ++R K +++Q + I G G RYE G+ ++ + RV Sbjct: 72 AELNN--LVLPEEIKEIRSKYNVSQTLFALILGLGEATIQRYEMGSLPTKVNSDLIKRV 128 >UniRef50_A1WP30 Transcriptional regulator, XRE family n=4 Tax=Proteobacteria RepID=A1WP30_VEREI Length = 107 Score = 58.6 bits (140), Expect = 6e-08, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Query: 66 AETVAPEF--IVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKH 123 PE + + R+K LTQ +E V +E+G P + LLR+L KH Sbjct: 38 GRVTTPEQLLVRRAREKSGLTQAAFAERIATPVATLRDWEQGRFVPPGGVLCLLRLLVKH 97 Query: 124 PELLNEI 130 PEL E+ Sbjct: 98 PELSQEL 104 >UniRef50_A7BVU4 Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BVU4_9GAMM Length = 173 Score = 58.6 bits (140), Expect = 6e-08, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 43/135 (31%), Gaps = 13/135 (9%) Query: 3 CPVCH-QGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 C C + + + + T RG C C E + DA + +R Sbjct: 5 CLTCDYEEALELKRESVIITVRGETIEATE-ELYQCPACGEKFTSSHGHDALEEAYREYR 63 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPS--------- 112 N V PE I R+ LT E S + +R+E+G Q Sbjct: 64 RRHN--LVQPEDIRHWREHYGLTLTELSHLLEWDEATLNRFEQGALQEVSEDKWLKFIMI 121 Query: 113 TIKLLRVLDKHPELL 127 LL ++ PE Sbjct: 122 PQNLLYLIVSKPETF 136 >UniRef50_C7JIU1 Transcriptional regulator Xre n=8 Tax=Acetobacter pasteurianus RepID=C7JIU1_ACEP3 Length = 98 Score = 58.2 bits (139), Expect = 7e-08, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 28/57 (49%) Query: 74 IVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEI 130 + +R + L+Q + ++ G +E G QP LL +LDK P L++E+ Sbjct: 37 VAAIRTRTGLSQAQFAKSIGVAKGTLLNWEHGRRQPTGPAQVLLAMLDKRPSLVSEL 93 >UniRef50_A0S0K2 Helix-turn-helix motif protein n=1 Tax=Acinetobacter venetianus RepID=A0S0K2_9GAMM Length = 104 Score = 58.2 bits (139), Expect = 9e-08, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 35/92 (38%), Gaps = 8/92 (8%) Query: 38 VHCEESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVN 97 E + ++ A A + + + R+K LTQ + ++I G Sbjct: 18 DIEAEILQGIDDMLANNAAKRTVITETD--------VALARRKAQLTQDQFAKILGVSRR 69 Query: 98 AFSRYEKGNAQPHPSTIKLLRVLDKHPELLNE 129 +E+G +P + L+R+ P+ + E Sbjct: 70 TLESWEQGARRPSGAATSLIRLFIVDPKFVKE 101 >UniRef50_B5EAM0 Putative uncharacterized protein n=1 Tax=Geobacter bemidjiensis Bem RepID=B5EAM0_GEOBB Length = 159 Score = 58.2 bits (139), Expect = 9e-08, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 46/119 (38%), Gaps = 2/119 (1%) Query: 1 MKCPVCHQGEMVSGIKDIPYTFRG-RKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKA 59 M+CP C + E++ +++ Y G L GI C C + + + Sbjct: 1 MRCPTCDRSELIESVENYHYRECGLENITLSGITVRKCPECGVVMPKIRNIEGLHDCIAK 60 Query: 60 FRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLR 118 F +APE IV +RK L + + ++ S++E G + S L R Sbjct: 61 FLVKKEERLLAPE-IVFLRKSLGWSSSDLAKNLQIDKTQVSKWEHGRVEMSKSNELLFR 118 >UniRef50_B1TDU4 Putative uncharacterized protein n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1TDU4_9BURK Length = 81 Score = 57.8 bits (138), Expect = 1e-07, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 25/50 (50%) Query: 82 SLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEIR 131 + Q + + G V + +E+G P + LLRV +HPE L +++ Sbjct: 29 GIAQSAFASLLGVSVRTYQDWEQGRRNPTGAAQTLLRVAVQHPEALQDLQ 78 >UniRef50_A8V2S1 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V2S1_9AQUI Length = 128 Score = 57.8 bits (138), Expect = 1e-07, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 3/60 (5%) Query: 70 APEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNE 129 + I ++RKKL LTQ+E +++ G G +R+E G ++P L L+K L+ E Sbjct: 2 TGKEIRELRKKLGLTQEEFAQLLGVGFTTVNRWENGKSEPRGQA---LEALEKLRTLIEE 58 >UniRef50_C4Z706 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=C4Z706_EUBE2 Length = 178 Score = 57.4 bits (137), Expect = 1e-07, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 35/65 (53%) Query: 66 AETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPE 125 + + E I +RK L LTQKE + + G R+EK NA+ + L ++++ +P+ Sbjct: 5 KDYITSEDIKNLRKNLGLTQKEFASLVGTSKPTIERWEKENAKITGPIVLLSKMINDYPD 64 Query: 126 LLNEI 130 +N + Sbjct: 65 YVNRL 69 >UniRef50_Q1NLC9 Helix-turn-helix motif n=12 Tax=cellular organisms RepID=Q1NLC9_9DELT Length = 96 Score = 57.4 bits (137), Expect = 1e-07, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 29/58 (50%) Query: 69 VAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPEL 126 VAP + VR+K+ L+Q E + + + +E+ P + LL+++ P+L Sbjct: 32 VAPPDVKAVREKIGLSQSEFARLMHVSIKTLQNWEQHRRTPTGPAVALLKIVSTAPDL 89 >UniRef50_D1AHE8 Putative uncharacterized protein n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AHE8_SEBTE Length = 214 Score = 57.4 bits (137), Expect = 1e-07, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 43/120 (35%), Gaps = 3/120 (2%) Query: 12 VSGIKDIPYTFRGRKTVLKGIHGLYCV-HCEESIMNKEESDAFMAQVKAFRASVNAETVA 70 + I T++ + + I E I + + +V + + Sbjct: 3 IEKIVSKKKTYKVKNLDITFIEQTKINIETGEEIFDSKLEKENGIRVTDEYKNQVGLLTS 62 Query: 71 PEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEI 130 + K+R K ++Q E + + G +RYE G + S L+R++ + L + Sbjct: 63 -NELKKIRNKYKISQIEFALLLDLGEKNITRYENG-MIQNKSIDSLIRLMKNNMNFLTLL 120 >UniRef50_C6S831 Putative transcriptional regulator n=2 Tax=Neisseria meningitidis RepID=C6S831_NEIML Length = 217 Score = 57.4 bits (137), Expect = 1e-07, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 3/92 (3%) Query: 42 ESIMNKEESDAFMAQVKAFRASVN---AETVAPEFIVKVRKKLSLTQKEASEIFGGGVNA 98 E + E+ ++A A + A ++PE I +R+ L+ +Q + V Sbjct: 123 EGLEAAEQYLQGKITLRAIEAEIPENGAAAISPEEIRAIRESLNFSQAVFARKLRCSVRT 182 Query: 99 FSRYEKGNAQPHPSTIKLLRVLDKHPELLNEI 130 + +E+G +P+P L R++ K P+ I Sbjct: 183 YQGWEQGKTRPNPQAALLRRMVQKSPKTFKTI 214 >UniRef50_B8ILW2 Transcriptional regulator, XRE family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8ILW2_METNO Length = 120 Score = 57.4 bits (137), Expect = 1e-07, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 29/57 (50%) Query: 69 VAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPE 125 + + + RK LSLTQ+ + G + +E+G +P P+ L+R++ PE Sbjct: 54 LFARDVRRTRKSLSLTQEGFAAALGIPLGTLRNWEQGRVRPDPALRALIRLVKDDPE 110 >UniRef50_B0T885 Transcriptional regulator, XRE family n=2 Tax=Alphaproteobacteria RepID=B0T885_CAUSK Length = 99 Score = 57.4 bits (137), Expect = 1e-07, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 2/69 (2%) Query: 62 ASVNAETVAPEFI--VKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRV 119 SV A AP + +R++L L+Q + FG +A +E+ +P + LL V Sbjct: 25 RSVPARVHAPAEVDVRAIRQRLGLSQNAFAARFGFSASAVKDWEQHRRRPEAAARILLTV 84 Query: 120 LDKHPELLN 128 +D+ P + Sbjct: 85 IDREPAAVE 93 >UniRef50_A3XE19 Transcriptional regulator, XRE family protein n=5 Tax=Rhodobacterales RepID=A3XE19_9RHOB Length = 97 Score = 57.4 bits (137), Expect = 1e-07, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 34/70 (48%) Query: 61 RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVL 120 A V+ +VA + +VR++ L+Q E ++ G +E G QP LL ++ Sbjct: 24 NAKVHEVSVAEVDVAQVRQRTGLSQAEFAKSIGVAKGTLLNWEHGRRQPTGPAQVLLALI 83 Query: 121 DKHPELLNEI 130 K P ++ ++ Sbjct: 84 AKKPSVVQDL 93 >UniRef50_Q2RXN6 Transcriptional regulator, XRE family n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RXN6_RHORT Length = 96 Score = 57.4 bits (137), Expect = 2e-07, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 40/86 (46%) Query: 44 IMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYE 103 ++ ++ A+ +T A + +R+ L L+Q E + FG ++ +E Sbjct: 7 LIGMRQAVAYARGEAVGVRETTVKTPASVDVKAIREGLGLSQSEFARQFGFSTSSIRNWE 66 Query: 104 KGNAQPHPSTIKLLRVLDKHPELLNE 129 +G+ P LL+V++ PE++ + Sbjct: 67 QGHRYPEGPARVLLKVIEIDPEVVRK 92 >UniRef50_C8WL78 Transcriptional regulator, XRE family n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WL78_EGGLE Length = 189 Score = 57.0 bits (136), Expect = 2e-07, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 69 VAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 + + I ++R+K LTQ+ + + G G + RYE G P + L+R D Sbjct: 5 LTAQDIKRIRRKYGLTQQGFARLLGLGEASVVRYENGQ-TPSKANANLIRAADN 57 >UniRef50_D1RWL1 Putative uncharacterized protein n=1 Tax=Serratia odorifera 4Rx13 RepID=D1RWL1_SEROD Length = 147 Score = 56.6 bits (135), Expect = 2e-07, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 2/76 (2%) Query: 50 SDAFMAQVKAFRAS--VNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNA 107 +++F S V E + P+ I +R++L L+Q + ++ ++E G Sbjct: 66 GAISQETMRSFDESCLVPLEELQPKEIKALREQLHLSQPVFARYLNTSLSTIQKWESGAK 125 Query: 108 QPHPSTIKLLRVLDKH 123 P ++KLL ++ KH Sbjct: 126 LPGGPSLKLLSIVQKH 141 >UniRef50_C4KSU6 Transcriptional regulator, XRE family n=19 Tax=pseudomallei group RepID=C4KSU6_BURPS Length = 103 Score = 56.6 bits (135), Expect = 2e-07, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 31/85 (36%), Gaps = 4/85 (4%) Query: 17 DIPYTFRGRKT--VLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRASVNAETVAPEFI 74 + +T R + G+ C C+ + + A I Sbjct: 6 NESFTIRHETFGAPVPGLSDWRCKACDAVEFDPRSALRHAEDGDALVLQAREH--TQREI 63 Query: 75 VKVRKKLSLTQKEASEIFGGGVNAF 99 ++RKK +Q +A+ + GGG NAF Sbjct: 64 HRMRKKPHPSQVQAARLTGGGHNAF 88 >UniRef50_Q2SMC7 Predicted transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SMC7_HAHCH Length = 191 Score = 56.2 bits (134), Expect = 3e-07, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 27/57 (47%) Query: 73 FIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNE 129 I R K L+Q++ ++ V +E+ P S L+++ KHPE++ E Sbjct: 5 EISGARLKAGLSQRDFAKALQISVRTLQEWEQNRRSPSGSAKALVKIAIKHPEIIRE 61 >UniRef50_A3V8Z5 Transcriptional regulator, XRE family n=2 Tax=Bacteria RepID=A3V8Z5_9RHOB Length = 107 Score = 56.2 bits (134), Expect = 3e-07, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 32/66 (48%) Query: 60 FRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRV 119 + A A ++ ++R++L LTQ + + ++ +E+G P LL++ Sbjct: 33 LEDDLAALADAGDYARQIRRRLGLTQVQLATKLDVPIDTLRNWEQGKRYPTGPAKALLKI 92 Query: 120 LDKHPE 125 LD+ PE Sbjct: 93 LDRAPE 98 >UniRef50_Q1YM79 Putative uncharacterized protein n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YM79_MOBAS Length = 123 Score = 56.2 bits (134), Expect = 3e-07, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 7/81 (8%) Query: 49 ESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQ 108 + D V ++ V + ++R+KL LTQ + + G + +E+G Sbjct: 38 QGDDSQVTVHRYKIEVP-------DVARLRRKLKLTQADFALKIGVPIATLRNWEQGRRY 90 Query: 109 PHPSTIKLLRVLDKHPELLNE 129 P LL VL + PEL+ E Sbjct: 91 PTGPARVLLNVLARRPELVME 111 >UniRef50_C6MUZ5 Transcriptional regulator, XRE family n=1 Tax=Geobacter sp. M18 RepID=C6MUZ5_9DELT Length = 272 Score = 55.9 bits (133), Expect = 4e-07, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 48/117 (41%), Gaps = 4/117 (3%) Query: 2 KCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 +C C+ ++ +K +F+ R+ + + C +C+ + +++ + Sbjct: 4 ECLDCNVKLILEKVK-KSVSFKDRQLEI-EYNVEVCPNCKIEYASVDQASDIQFALAEAY 61 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLR 118 + + A E + R + L+Q +E+ GV + R+E G S LL+ Sbjct: 62 KKQSNKMTAAE-MKSQRAEKHLSQTGLAELLNVGVASIKRWESGLV-QSRSMDNLLK 116 >UniRef50_A1U433 Helix-turn-helix domain protein n=2 Tax=Gammaproteobacteria RepID=A1U433_MARAV Length = 107 Score = 55.9 bits (133), Expect = 4e-07, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 31/60 (51%) Query: 63 SVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 ++ + PE I +R + ++Q + I V+ ++E G +P +++KLL ++ + Sbjct: 40 RTDSRELPPEEIRNIRSQTRMSQAVFAAILNVSVSTVQKWETGEKKPAGASLKLLNLVRR 99 >UniRef50_B3EG51 Transcriptional regulator, XRE family n=5 Tax=Chlorobium/Pelodictyon group RepID=B3EG51_CHLL2 Length = 96 Score = 55.9 bits (133), Expect = 4e-07, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 30/63 (47%) Query: 66 AETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPE 125 A + +R+ L LTQ E S FG V A +E+ QP + LL+V+ + PE Sbjct: 29 AHVPDEVDVKAIRQSLGLTQPEFSLRFGFDVRAVQDWEQKRRQPDRAARVLLKVIAREPE 88 Query: 126 LLN 128 + Sbjct: 89 AVQ 91 >UniRef50_C7JJ64 Transcriptional regulator Xre n=8 Tax=Acetobacter pasteurianus RepID=C7JJ64_ACEP3 Length = 99 Score = 55.1 bits (131), Expect = 6e-07, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 35/94 (37%), Gaps = 10/94 (10%) Query: 47 KEESDAFMAQVKAFRASV--------NAETVAPEFI--VKVRKKLSLTQKEASEIFGGGV 96 E+ + + + +V P I +RK+ L+Q + +G Sbjct: 2 AEQMNIADELLTSMEQAVGIAAGTVKPGRIWTPPEINVADIRKRTGLSQVRFAARYGFSA 61 Query: 97 NAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEI 130 A +E+ P + LL ++DK P+ + + Sbjct: 62 AAVRDWEQKRRTPEKAARTLLMLIDKEPQAVERV 95 >UniRef50_Q01NF8 Transcriptional regulator, XRE family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NF8_SOLUE Length = 124 Score = 55.1 bits (131), Expect = 6e-07, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 34/82 (41%), Gaps = 2/82 (2%) Query: 48 EESDAFMAQVKAFRASVNAETVAPEF--IVKVRKKLSLTQKEASEIFGGGVNAFSRYEKG 105 + A ++ P + +R+KL L+Q + + +FG V + +E+G Sbjct: 36 DSLKELQAHLRGEIRLTETLYHVPPETDVRALRQKLGLSQSDFAALFGFNVRSLQDWEQG 95 Query: 106 NAQPHPSTIKLLRVLDKHPELL 127 +P L V+ + P+ + Sbjct: 96 RRRPEIPIRAYLAVIQRDPQAV 117 >UniRef50_B4TA30 DNA-binding protein n=47 Tax=Proteobacteria RepID=B4TA30_SALHS Length = 107 Score = 55.1 bits (131), Expect = 6e-07, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 30/55 (54%) Query: 69 VAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKH 123 + P I +R+KL+++Q + V+ ++E G +P ++KLL V+ KH Sbjct: 47 LQPLEIKALREKLNVSQPVFARYLNTSVSTVQKWESGAKRPSGMSLKLLNVVQKH 101 >UniRef50_Q0AU89 Putative uncharacterized protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AU89_SYNWW Length = 336 Score = 55.1 bits (131), Expect = 7e-07, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 45/118 (38%), Gaps = 3/118 (2%) Query: 3 CPVCHQGEMVSGIKDIPY-TFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 C +C Q V+ K+ T +G + YC C + +DA + ++ Sbjct: 6 CYLCDQSSEVTVKKEEEIHTIKGTPVKC-EVENAYCGQCGSKVYIPALNDANLDRMDHTY 64 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRV 119 N + + I ++ ++ ++ K + + G G RY KG + LL + Sbjct: 65 RRQNG-IITVQEIEEILRQYNIGAKPLAAMLGWGEVTILRYLKGQIPDRAHSNTLLSL 121 >UniRef50_Q9KMA5 Antitoxin higA-2 n=32 Tax=Proteobacteria RepID=HIGA2_VIBCH Length = 104 Score = 55.1 bits (131), Expect = 7e-07, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 37/67 (55%) Query: 64 VNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKH 123 V ++P+ IV +R++ ++++ + + +E+G + P+ + LL+++ +H Sbjct: 35 VGELNISPDEIVSIREQFNMSRGVFARLLHTSSRTLENWEQGRSVPNGQAVTLLKLVQRH 94 Query: 124 PELLNEI 130 PE L+ I Sbjct: 95 PETLSHI 101 >UniRef50_B1ZE25 Transcriptional regulator, XRE family n=8 Tax=Bacteria RepID=B1ZE25_METPB Length = 108 Score = 54.7 bits (130), Expect = 9e-07, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 36/80 (45%), Gaps = 5/80 (6%) Query: 43 SIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRY 102 ++K F E + PE I ++R+ S++Q ++ + S++ Sbjct: 27 GAIDKATMRRF-----DLSCLTPVEPLEPEAIRQIREASSMSQAVFAKALNVTASLVSQW 81 Query: 103 EKGNAQPHPSTIKLLRVLDK 122 E+G +P ++KLL + ++ Sbjct: 82 ERGEKKPSGPSLKLLNLAER 101 >UniRef50_Q9JXT5 Helix-turn-helix family protein n=1 Tax=Neisseria meningitidis serogroup B RepID=Q9JXT5_NEIMB Length = 103 Score = 54.7 bits (130), Expect = 9e-07, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 2/75 (2%) Query: 50 SDAFMAQVKAFRASV--NAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNA 107 ++ F S + ++ I +R+K +L+Q + G N S +E+G Sbjct: 22 GAIDKKTMRDFDKSCLTEIKPLSGGDIKAIREKEALSQAAFAIYLNVGKNHVSAWERGVK 81 Query: 108 QPHPSTIKLLRVLDK 122 +P + +KLL ++ Sbjct: 82 KPSGAALKLLTIVKN 96 >UniRef50_A6Q853 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q853_SULNB Length = 104 Score = 54.3 bits (129), Expect = 1e-06, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 39/87 (44%), Gaps = 4/87 (4%) Query: 48 EESDAFMAQVKAFRAS----VNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYE 103 E++ AF + + ++ + I +R+K ++++ + ++E Sbjct: 15 EDAKAFEQDKLTLKTISITPKERKVLSADEIRSIREKYNMSRALFANFLHISPRTLEKWE 74 Query: 104 KGNAQPHPSTIKLLRVLDKHPELLNEI 130 G ++P+ LL + DK+P+++ + Sbjct: 75 LGTSRPNEQASTLLALTDKYPDMIERL 101 >UniRef50_B6WV39 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WV39_9DELT Length = 104 Score = 54.3 bits (129), Expect = 1e-06, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 30/55 (54%) Query: 74 IVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLN 128 + +R+KL L+Q + FG + +E+G QP P+ LRV++ P+++ Sbjct: 44 VKAIRQKLGLSQAVFAAAFGLSLYTLRNWEQGRRQPDPAARAYLRVIEVAPDVVR 98 >UniRef50_B1ZSG3 Transcriptional regulator, XRE family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZSG3_OPITP Length = 181 Score = 54.3 bits (129), Expect = 1e-06, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Query: 54 MAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPST 113 ++A +A + P+ + +R++L LTQK ++ G +++R+E G +P S Sbjct: 53 EELIEATKARHMGLLL-PDQLRTLRERLGLTQKAIGDLLQIGAKSWTRWETGTQRPSRSL 111 Query: 114 IKLLR 118 LLR Sbjct: 112 NLLLR 116 >UniRef50_C0VJ40 Helix-turn-helix XRE family protein n=1 Tax=Acinetobacter sp. ATCC 27244 RepID=C0VJ40_9GAMM Length = 100 Score = 53.9 bits (128), Expect = 1e-06, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 29/56 (51%) Query: 74 IVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNE 129 + KVR+K L+Q+E + V +E P S + LLR+LD PEL+ E Sbjct: 45 VKKVREKTYLSQEEFAARLHIDVKKLQSWESRKRSPTGSVLLLLRILDIQPELVFE 100 >UniRef50_C6N1Q6 Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N1Q6_9GAMM Length = 90 Score = 53.9 bits (128), Expect = 2e-06, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 29/57 (50%) Query: 67 ETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKH 123 E + P+ I +R K ++Q + I + + ++E+G P + +KLLR+ H Sbjct: 27 EELLPDEIKAMRSKEKISQSVMARILNVTTSTYQKWERGEVHPKGANLKLLRLAYDH 83 >UniRef50_Q73NN7 DNA-binding protein, putative n=1 Tax=Treponema denticola RepID=Q73NN7_TREDE Length = 102 Score = 53.6 bits (127), Expect = 2e-06, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 32/60 (53%) Query: 71 PEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEI 130 P I K+R K + TQ+E + + + +E+G +P + + LL+++ +P+ + + Sbjct: 40 PLDIAKIRSKTNKTQEEFASMLNISIGTLRNWEQGRRKPDGAALSLLKIVSANPQYVESV 99 >UniRef50_B8F4C3 Predicted helix-turn-helix containing protein n=2 Tax=Haemophilus parasuis RepID=B8F4C3_HAEPS Length = 98 Score = 53.6 bits (127), Expect = 2e-06, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 38/96 (39%), Gaps = 9/96 (9%) Query: 45 MNKEESDAFMAQVKAFRASVNAETVAPEF---------IVKVRKKLSLTQKEASEIFGGG 95 M KE + M + A E P + +R + + Q E + + G Sbjct: 1 MEKELFERLMESAREMVAIEKGEIEVPPHRIHIHKIPNVKAIRTQHQMKQAEFASLLGVS 60 Query: 96 VNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEIR 131 N +E G P+ + KLL ++++ P L+ ++ Sbjct: 61 QNLVQSWEIGRRTPNGAARKLLAIIEQQPNLVPVLQ 96 >UniRef50_Q6MB64 Putative uncharacterized protein n=2 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MB64_PARUW Length = 106 Score = 53.2 bits (126), Expect = 3e-06, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 24/52 (46%) Query: 71 PEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 + I ++RKK +Q ++I +E G P ++LL ++DK Sbjct: 43 AQDIKRIRKKCHYSQVVFAKILNVSPRTIQSWESGQRVPSHVALRLLEIVDK 94 >UniRef50_B9ZKV2 Transcriptional regulator, XRE family n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZKV2_9GAMM Length = 96 Score = 53.2 bits (126), Expect = 3e-06, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 26/54 (48%) Query: 74 IVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELL 127 + +R+K ++Q+ FG + +E+G P LL+V++ PE + Sbjct: 36 VKAIREKTGMSQQRFCAAFGISIGTLRHWEQGLRAPRGPARVLLKVVENDPEAV 89 >UniRef50_B3QWV0 Transcriptional regulator, XRE family n=3 Tax=Bacteria RepID=B3QWV0_CHLT3 Length = 101 Score = 53.2 bits (126), Expect = 3e-06, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 34/53 (64%) Query: 70 APEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 +P+ I ++RK+ +L+Q + +F + ++E+GN +P ++ KLL ++++ Sbjct: 42 SPKKITEIRKRFNLSQAALASVFNISTSTVQKWEQGNKKPTGASRKLLDIMER 94 >UniRef50_Q6MCF7 Putative uncharacterized protein n=2 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MCF7_PARUW Length = 118 Score = 53.2 bits (126), Expect = 3e-06, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 34/60 (56%) Query: 71 PEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEI 130 + I ++R KL+ +Q + +N +E+G+ +P+ + ++LL ++D+ P+ L + Sbjct: 47 AKDIKQLRNKLNCSQSLLAAYLNISLNTIQAWEQGSRRPNHAALRLLEIMDRGPQFLASL 106 >UniRef50_Q0G0M0 DNA-binding protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G0M0_9RHIZ Length = 111 Score = 52.8 bits (125), Expect = 4e-06, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 2/70 (2%) Query: 61 RASVNAETVAPEFI--VKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLR 118 A + A PE I VR+ L L+Q + + FG +E+G ++P+ + + LL Sbjct: 36 NAGIEARKHGPEPISARAVREALHLSQAQFALRFGLEEATVKNWEQGKSKPNATAMTLLW 95 Query: 119 VLDKHPELLN 128 + ++PE + Sbjct: 96 TIHRNPEAVA 105 >UniRef50_C2LEY4 Regulatory protein n=4 Tax=Enterobacteriaceae RepID=C2LEY4_PROMI Length = 106 Score = 52.4 bits (124), Expect = 4e-06, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 42/85 (49%), Gaps = 3/85 (3%) Query: 41 EESIMNKEESDAFMAQVKAFRASVNAETVAP---EFIVKVRKKLSLTQKEASEIFGGGVN 97 + + + + A++KA + P E I ++R++ +++Q + I Sbjct: 17 DAGVTDGSTTKRIAARIKAKELQAKYKHPTPMTGEDIKRIREQNNISQSSLALILNMTKE 76 Query: 98 AFSRYEKGNAQPHPSTIKLLRVLDK 122 + S++E+ +P+ + ++LL ++DK Sbjct: 77 SVSKWERNEIKPNGAALRLLHLIDK 101 >UniRef50_Q5HXG4 Putative uncharacterized protein n=2 Tax=Alphaproteobacteria RepID=Q5HXG4_GLUOX Length = 109 Score = 52.4 bits (124), Expect = 4e-06, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 3/83 (3%) Query: 46 NKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKG 105 + D + +P VR+ L LTQK+ + + G V + +E+G Sbjct: 25 TDGDIDRQAKEDGTDVELPGLAAPSPAT---VRRHLKLTQKDIAALAGVPVATWRNWEQG 81 Query: 106 NAQPHPSTIKLLRVLDKHPELLN 128 + P+ LLRVL + P+ + Sbjct: 82 RVRLDPAVRTLLRVLWREPDAVR 104 >UniRef50_Q3B4L5 Transcriptional regulator, XRE family n=2 Tax=Chlorobium/Pelodictyon group RepID=Q3B4L5_PELLD Length = 100 Score = 52.4 bits (124), Expect = 4e-06, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 26/52 (50%) Query: 71 PEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 PE I ++R ++Q + I G G ++E+G P + +LL V+ + Sbjct: 42 PEEIREIRISNHVSQAAFAAIIGVGKTTVQQWEQGQKHPGGAAKRLLDVISR 93 >UniRef50_B5UX67 Prophage ps3 protein 01, putative n=10 Tax=Firmicutes RepID=B5UX67_BACCE Length = 334 Score = 52.4 bits (124), Expect = 4e-06, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 41/116 (35%), Gaps = 9/116 (7%) Query: 15 IKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRASVNAETVAPEFI 74 I+ Y + G++ C C+ I D + Q+ E I Sbjct: 25 IRGKQYHYVGKEAN--------CEECKSEIFVPNIHDYNLEQLDHAYRQQEQLVTISE-I 75 Query: 75 VKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEI 130 +V +K + ++ S + G G +RY G+ + L R+ +L+ + Sbjct: 76 REVLEKYKIGKRPLSLLLGWGEVTLTRYVNGDIPTKQYSDILKRLGRDQSFMLDIL 131 >UniRef50_B2FJQ1 Putative DNA-binding protein n=1 Tax=Stenotrophomonas maltophilia K279a RepID=B2FJQ1_STRMK Length = 110 Score = 52.4 bits (124), Expect = 5e-06, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 27/53 (50%) Query: 70 APEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 + I +R L L+Q + + V+ +E+G +P ++KLL ++D+ Sbjct: 51 SSAQIRALRTSLELSQPVFAGVLNTSVSTVRSWEQGEKKPSGPSLKLLNLIDR 103 >UniRef50_B2ICD7 Transcriptional regulator, XRE family n=2 Tax=Rhizobiales RepID=B2ICD7_BEII9 Length = 92 Score = 52.4 bits (124), Expect = 5e-06, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 5/85 (5%) Query: 46 NKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKG 105 + + + F +A A I K R L L+Q E + F V +E+ Sbjct: 11 DPADIEDFDVSPEAMDRGQRARM-----IRKTRTALGLSQAEFASRFRVPVGTLRDWEQA 65 Query: 106 NAQPHPSTIKLLRVLDKHPELLNEI 130 A I +RV+ HP+L+ ++ Sbjct: 66 RATAPDFAIAYIRVIGMHPDLVAKV 90 >UniRef50_A8GG35 Transcriptional regulator, XRE family n=2 Tax=Proteobacteria RepID=A8GG35_SERP5 Length = 100 Score = 52.0 bits (123), Expect = 6e-06, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 29/53 (54%) Query: 70 APEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 P I +R++ +++Q + A ++E+G A P+ + +KLL ++D+ Sbjct: 41 TPADIRALRERENVSQPVFALHLNVSKKAVQKWERGEAVPNSAAMKLLSLVDR 93 >UniRef50_B5W498 Transcriptional regulator, XRE family n=2 Tax=Arthrospira RepID=B5W498_SPIMA Length = 150 Score = 52.0 bits (123), Expect = 6e-06, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 33/61 (54%) Query: 71 PEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEI 130 P+ + ++R L L+Q E ++ G +R+E G++QP +I L++ + L +I Sbjct: 17 PQLLRQLRGDLELSQAEMAQFLGVSAQTINRWENGHSQPSAISINLMQHKLSSLDSLKDI 76 Query: 131 R 131 + Sbjct: 77 K 77 >UniRef50_A6DKJ3 Transcriptional regulator-like protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DKJ3_9BACT Length = 105 Score = 52.0 bits (123), Expect = 6e-06, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 31/53 (58%) Query: 70 APEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 P I+++RK L ++Q+ + + G S++E+G +QP + L+VL+K Sbjct: 46 TPSKIIQLRKSLRVSQQVFANVVGVTSGTVSKWERGESQPEKVACRFLKVLEK 98 >UniRef50_B1Z950 Putative uncharacterized protein n=1 Tax=Methylobacterium populi BJ001 RepID=B1Z950_METPB Length = 127 Score = 52.0 bits (123), Expect = 6e-06, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 25/51 (49%) Query: 75 VKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPE 125 VR++ LTQ + G + +E+G P PS L+R++ + PE Sbjct: 54 RAVREQFGLTQAAFAAWIGVPLATLRNWEQGRTSPDPSARALMRMMAREPE 104 >UniRef50_B8FKT9 Putative transcriptional regulator, XRE family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FKT9_DESAA Length = 128 Score = 51.6 bits (122), Expect = 7e-06, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 40/120 (33%), Gaps = 3/120 (2%) Query: 3 CPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRA 62 CP C M K+ FRGR+ + + C C E++ A + Sbjct: 8 CPGCG-ASMPLCTKEATIQFRGREITV-EVACHVCPDCGLEAGTPEQACTIQAAIAEAYR 65 Query: 63 SVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 I + R L+Q+E +E G + +E G Q L ++L Sbjct: 66 FQEGMMTG-REITETRWSKGLSQEELAEKTGFPLREIQCWEAGAIQSREQDDLLRQILTD 124 >UniRef50_D0IHU8 Putative uncharacterized protein n=1 Tax=Vibrio sp. RC586 RepID=D0IHU8_9VIBR Length = 223 Score = 51.6 bits (122), Expect = 8e-06, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 2/55 (3%) Query: 69 VAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKH 123 + VR +L L Q + + G + SRYE+G P L R+++ + Sbjct: 11 TFGGRLKSVRTQLGLNQSQMAGQIGVSKDTLSRYERGELTPS--IDVLKRIIESY 63 >UniRef50_A1AZA3 Transcriptional regulator, XRE family n=3 Tax=Bacteria RepID=A1AZA3_PARDP Length = 97 Score = 51.2 bits (121), Expect = 1e-05, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 36/82 (43%) Query: 43 SIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRY 102 S ++ A + + A P +VR + LTQ + + + G ++ + ++ Sbjct: 7 STFGEDLIQAMGEALAHAKGEGTAILHEPVDPREVRMRAKLTQAQMAPLMGMSLSGYRKW 66 Query: 103 EKGNAQPHPSTIKLLRVLDKHP 124 E+G + LLRV++K P Sbjct: 67 EQGQRRVSGPAATLLRVIEKEP 88 >UniRef50_D2BLB0 Phage protein, transcriptional regulator, Cro/CI family n=4 Tax=root RepID=D2BLB0_LACLK Length = 306 Score = 51.2 bits (121), Expect = 1e-05, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 43/111 (38%), Gaps = 2/111 (1%) Query: 12 VSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRASVNAETVAP 71 + +T RG + + L+ E + ++E D + + V P Sbjct: 4 IKKDYKQIFTIRGEEFEVTA-PALFDDSTNELLYDEELDDKAIEMANDLYREAHG-FVYP 61 Query: 72 EFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 I K R+KLS++ ++ + + G YE G ++ KL +++ Sbjct: 62 SEIKKFREKLSISGRDLAALIGFSPTTIVMYENGALPTESNSRKLKDLINN 112 >UniRef50_P0A9V7 Uncharacterized HTH-type transcriptional regulator yiaG n=106 Tax=Enterobacteriaceae RepID=YIAG_ECO57 Length = 96 Score = 50.9 bits (120), Expect = 1e-05, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 30/63 (47%) Query: 68 TVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELL 127 T + I ++RK L + + + G V +E +P + +KL+R++ +P L Sbjct: 32 TTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALS 91 Query: 128 NEI 130 ++ Sbjct: 92 KQL 94 >UniRef50_Q88NK9 Transcriptional regulator, Cro/CI family n=56 Tax=Gammaproteobacteria RepID=Q88NK9_PSEPK Length = 98 Score = 50.9 bits (120), Expect = 1e-05, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 27/78 (34%) Query: 48 EESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNA 107 E + R V + K+R+ L+Q ++ V +E+G Sbjct: 14 ESMTQMDEIDRGERQPSREFHVDALQVKKIRQATGLSQAAFAKRIDVAVGTLRNWEQGRR 73 Query: 108 QPHPSTIKLLRVLDKHPE 125 +P LLR + PE Sbjct: 74 EPEGPARALLRAIHNDPE 91 >UniRef50_C1AE28 Xre family DNA binding protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AE28_GEMAT Length = 103 Score = 50.9 bits (120), Expect = 1e-05, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 31/82 (37%) Query: 48 EESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNA 107 E A + R A P + VR L +Q E + + G V +E+G Sbjct: 11 ESVRQAGAIRRGERKPARARQFKPTDVKAVRADLGQSQAEFALMIGVSVATLRNWEQGRR 70 Query: 108 QPHPSTIKLLRVLDKHPELLNE 129 P + LL+V +P + E Sbjct: 71 MPEGPALALLQVAAHNPAAVVE 92 >UniRef50_C8WG12 Transcriptional regulator, XRE family n=2 Tax=Zymomonas mobilis subsp. mobilis RepID=C8WG12_ZYMMN Length = 93 Score = 50.9 bits (120), Expect = 1e-05, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 5/84 (5%) Query: 46 NKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKG 105 + + + F +A A I K R L L+QK+ + F V +E+ Sbjct: 11 DPADEEDFNVTKEAMERGQRARL-----IRKARSALGLSQKDFASRFKISVGTLRDWEQT 65 Query: 106 NAQPHPSTIKLLRVLDKHPELLNE 129 + I ++V+ HPE++ E Sbjct: 66 RSTAPDYAIAYVKVISLHPEMVAE 89 >UniRef50_C1TS72 Predicted transcriptional regulator, COG2944 n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TS72_9BACT Length = 100 Score = 50.9 bits (120), Expect = 1e-05, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 27/53 (50%) Query: 70 APEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 +PE I +R L+QK + + ++ ++E G +P + KLL VL+ Sbjct: 41 SPENIKHIRSLYDLSQKNLAFLLNVSLSTLQKWETGAKKPAGAARKLLNVLES 93 >UniRef50_B8IBQ3 Transcriptional regulator, XRE family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IBQ3_METNO Length = 119 Score = 50.5 bits (119), Expect = 1e-05, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 29/52 (55%) Query: 74 IVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPE 125 + +R++L++TQ ++ G V +E+G QP P+ LL ++ + PE Sbjct: 53 VTTIRERLNMTQTVFAQALGVPVATIRNWEQGRKQPDPAARSLLTIVAREPE 104 >UniRef50_Q1I9J8 Putative transcriptional regulator n=1 Tax=Pseudomonas entomophila L48 RepID=Q1I9J8_PSEE4 Length = 93 Score = 50.5 bits (119), Expect = 2e-05, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 32/77 (41%), Gaps = 2/77 (2%) Query: 48 EESDAFMAQVKAFRASVNA--ETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKG 105 + ++ F A A + E I ++R+ L+ +Q + + ++E+G Sbjct: 10 QAGAVGKITLRDFEALCPAPVRAFSAEDIKRLREALNFSQPVFALHLHTSASTVRKWEQG 69 Query: 106 NAQPHPSTIKLLRVLDK 122 +P +KLL ++ Sbjct: 70 ETRPAGPALKLLNLIAD 86 >UniRef50_D2LEA3 Transcriptional regulator, XRE family n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LEA3_RHOVA Length = 127 Score = 50.5 bits (119), Expect = 2e-05, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 28/57 (49%) Query: 74 IVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEI 130 + ++R L L+Q E + +G ++ +E+G P + L+ ++ P L+ I Sbjct: 57 VRQLRDTLGLSQAEFASRYGLDLSTLRGWEQGRRTPDKANRTLIEAIEVSPGLMANI 113 >UniRef50_A9IKE0 Putative DNA-binding protein n=1 Tax=Bartonella tribocorum CIP 105476 RepID=A9IKE0_BART1 Length = 104 Score = 50.5 bits (119), Expect = 2e-05, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 36/91 (39%) Query: 38 VHCEESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVN 97 I+ A+ +A A + K+RK + LTQ + + FG V Sbjct: 5 NKAGSRILQGAREALAYAKGEADVTKFGIHIPANVDVKKIRKHIGLTQTQFAARFGFSVG 64 Query: 98 AFSRYEKGNAQPHPSTIKLLRVLDKHPELLN 128 +E+G S+ LL +++ PE ++ Sbjct: 65 RIRDWEQGRYSIDTSSRLLLSIIENEPEAID 95 >UniRef50_D1Y8M5 Helix-turn-helix domain protein n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y8M5_9BACT Length = 99 Score = 50.5 bits (119), Expect = 2e-05, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 2/66 (3%) Query: 56 QVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIK 115 Q++A R+ V T AP+ I +R +Q + + ++ ++E G +P ++ K Sbjct: 28 QIEALRSEVP--TYAPDKIKALRASTKFSQTAFASLLNVSLSTVQKWEAGVKKPDGASRK 85 Query: 116 LLRVLD 121 LL +L+ Sbjct: 86 LLHLLE 91 >UniRef50_C3QME8 Helix-turn-helix domain-containing protein n=2 Tax=Bacteroides RepID=C3QME8_9BACE Length = 331 Score = 50.5 bits (119), Expect = 2e-05, Method: Composition-based stats. Identities = 33/130 (25%), Positives = 48/130 (36%), Gaps = 5/130 (3%) Query: 1 MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAF 60 MK P + K + FR + H C E E M QV Sbjct: 1 MKSPFTGGDAALCHEK-QSFEFRKDNFEIV-YHFYRCKDTNEEFTTTELDQLNMNQVYNL 58 Query: 61 RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVL 120 A P+ I +VR+ ++ S++ G G N + +YE+G P S K++ L Sbjct: 59 YRQKYA-IPFPDEIKRVRELYGISALRMSKLLGFGDNQYRKYEEGE-TPSVSNGKMISAL 116 Query: 121 DKHPELLNEI 130 K P EI Sbjct: 117 -KDPHFFLEI 125 >UniRef50_C2XDJ5 Prophage ps3 protein 01 n=1 Tax=Bacillus cereus F65185 RepID=C2XDJ5_BACCE Length = 352 Score = 50.5 bits (119), Expect = 2e-05, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 40/112 (35%), Gaps = 6/112 (5%) Query: 3 CPVCHQ-GEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDA-FMAQVKAF 60 C C + + I G + C C + N E +D + + + Sbjct: 8 CVHCFERTPVEHKIVKDKVELHGETIIYDAER-YECTKCGQYTDNDELTDRNYNKIYRKY 66 Query: 61 RASVNAETVAPEFIVKVRKKL-SLTQKEASEIFGGGVNAFSRYEKGNAQPHP 111 + + + E VRK+L ++ + +++ G SRYE G+ Q Sbjct: 67 QEKKD--MLKAEDFYYVRKELYQVSTRVMAKLIGWSPATISRYEHGSLQTKK 116 >UniRef50_C7BSN7 Putative uncharacterized protein n=1 Tax=Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949 RepID=C7BSN7_PHOAA Length = 108 Score = 50.1 bits (118), Expect = 2e-05, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 31/58 (53%) Query: 65 NAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 +++ + E I K+R+ +++Q + N+ ++E+ P + +KLL +++K Sbjct: 44 SSDVMTGERIRKIREYYNISQGALATAINMSANSVQKWERDETHPTGAALKLLMIIEK 101 >UniRef50_C0GWH0 Transcriptional regulator, XRE family n=4 Tax=Proteobacteria RepID=C0GWH0_9DELT Length = 95 Score = 50.1 bits (118), Expect = 2e-05, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 28/58 (48%) Query: 69 VAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPEL 126 V+ + +R+++ L+Q E + + V +E+ +P LL ++ K P++ Sbjct: 32 VSSTDVKSLRERVGLSQSEFARLMRVSVKTLQNWEQHRRKPSGPAAALLTIVSKAPDV 89 >UniRef50_A5V2L1 Transcriptional regulator, XRE family n=31 Tax=Bacteria RepID=A5V2L1_SPHWW Length = 110 Score = 50.1 bits (118), Expect = 2e-05, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Query: 51 DAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPH 110 A M + AF E ++P I +R++ ++Q + +A S++E+G +P Sbjct: 33 KATMREFDAF-CLTPVEPLSPAEIRSLREREHVSQPVFAHYLNVRKDAVSKWERGEKKPD 91 Query: 111 PSTIKLLRVLDK 122 ++KLL ++ Sbjct: 92 GPSLKLLNLVRA 103 >UniRef50_A8HTF6 Putative transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8HTF6_AZOC5 Length = 301 Score = 50.1 bits (118), Expect = 2e-05, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 33/76 (43%), Gaps = 4/76 (5%) Query: 48 EESDAFMAQVKAFRAS--VNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKG 105 ++ + A ++ FR + I ++RK L + Q E + G + S++E Sbjct: 38 RQASSGAAPLRVFRNANMRRGMPNYARRIREIRKNLGMNQAEFAAALGVSQGSVSKWEAA 97 Query: 106 NAQPHPSTIKLLRVLD 121 QP + LL++ + Sbjct: 98 KEQPRTTA--LLKIAE 111 >UniRef50_C1A4Y5 Putative uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A4Y5_GEMAT Length = 173 Score = 50.1 bits (118), Expect = 2e-05, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 42/119 (35%), Gaps = 6/119 (5%) Query: 6 CHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCE-ESIMNKEESDAFMAQVKAFRASV 64 C G + + G + C C E + A A + RA+ Sbjct: 14 CG-GRYALQTEQVTVRLSGMAAEVTREFYR-CEKCGHEQRTIDQRDSAEKAATEQIRAAN 71 Query: 65 NAETVAPEFIVKVRKKLSLTQKEASEIF-GGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 + +AP I ++R+ L LT + +E+ G +EKG + L+R L Sbjct: 72 D--LLAPRAIRQLRESLGLTVPQFAELIYGTPKGILEGWEKGRYLQNREADALIRSLAD 128 >UniRef50_Q1WR49 Putative uncharacterized protein n=1 Tax=Lactobacillus salivarius UCC118 RepID=Q1WR49_LACS1 Length = 221 Score = 49.7 bits (117), Expect = 3e-05, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 42/108 (38%), Gaps = 7/108 (6%) Query: 17 DIPYTFRGRKTVLKGIH-GLYCVHCEESIMNKEESDAF-MAQVKAFRASVNAETVAPEFI 74 + T + K +H V E + + D + +RA + ++ + I Sbjct: 24 NETVTVK--DLTFKNMHTYWKSVTTGELYLPFNDPDINLNSDYDRYRAE--KKLLSTKDI 79 Query: 75 VKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 + +RKK L+ + +++ G G + S+ E G LLR+ Sbjct: 80 INIRKKYKLSLRSFAKVLGIGYSTLSKIENGAL-QSNEHDALLRLASD 126 >UniRef50_Q1QKM4 Transcriptional regulator, XRE family n=3 Tax=Bradyrhizobiaceae RepID=Q1QKM4_NITHX Length = 121 Score = 49.7 bits (117), Expect = 3e-05, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 24/55 (43%) Query: 73 FIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELL 127 + +R++ LTQ E + G V +E+G P LL V+ PE + Sbjct: 57 EVRDLRQRARLTQIEFAARLGVPVETIRNWEQGKRAPRGPARALLAVIAHAPETV 111 >UniRef50_Q6FBH4 Putative uncharacterized protein n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6FBH4_ACIAD Length = 85 Score = 49.7 bits (117), Expect = 3e-05, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 24/47 (51%) Query: 73 FIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRV 119 +V++R+ L+++Q + + G +E+G P S L+R+ Sbjct: 26 HMVRIRRALNISQAQLASKLGISARTLESWERGVRHPSSSAQALIRL 72 >UniRef50_C4ZEX8 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C4ZEX8_EUBR3 Length = 101 Score = 49.7 bits (117), Expect = 3e-05, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 34/83 (40%), Gaps = 4/83 (4%) Query: 48 EESDAFMAQVKAFRAS----VNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYE 103 EE+ A+ A R + + + + I +R K +TQ + G + +E Sbjct: 13 EEAIAYEKGYGAGRVKTYMILPVKEYSGKEIRDIRTKAGMTQSVFASYMGVSIKTVEAWE 72 Query: 104 KGNAQPHPSTIKLLRVLDKHPEL 126 G P +LL +L K+ E+ Sbjct: 73 GGRTHPTGPVFRLLDILSKNEEM 95 >UniRef50_Q2IXH5 Transcriptional regulator, XRE family n=6 Tax=Bradyrhizobiaceae RepID=Q2IXH5_RHOP2 Length = 133 Score = 49.7 bits (117), Expect = 3e-05, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 26/54 (48%) Query: 74 IVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELL 127 + +R++ LTQ E ++ G V+ +E+G P LL V+ P+ + Sbjct: 65 VRDLRRRARLTQTEFADRLGVPVDTIRNWEQGKRLPRGPARALLSVIAHAPDTV 118 >UniRef50_Q1NRF9 Virulence gene repressor RsaL n=9 Tax=Proteobacteria RepID=Q1NRF9_9DELT Length = 104 Score = 49.7 bits (117), Expect = 3e-05, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 42/90 (46%), Gaps = 1/90 (1%) Query: 42 ESIMNKEESDAFMAQVKAFRASVN-AETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFS 100 E E ++ + + A ++ + ++ +R++L L++ + + Sbjct: 12 EGFDALAEERTGKRTLRTYDVELKLAPEISADEVIALRERLHLSRSVFARYLRTNLRTLE 71 Query: 101 RYEKGNAQPHPSTIKLLRVLDKHPELLNEI 130 +E+G A+P+ LLR++ ++P+ ++ + Sbjct: 72 NWEQGRAKPNAQAALLLRLVQRYPDTVDRL 101 >UniRef50_Q6RGN8 SLV.32 n=1 Tax=Streptomyces lavendulae RepID=Q6RGN8_STRLA Length = 73 Score = 49.3 bits (116), Expect = 4e-05, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 5/63 (7%) Query: 68 TVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHP----STIKLLR-VLDK 122 APE ++R+ TQ + ++ G G +R+E G A P + +LLR ++ + Sbjct: 3 LPAPEMRGRLRRAAGFTQAQVAQALGVGRVQVARWETGYADPSGVRRTAYSRLLRELMRQ 62 Query: 123 HPE 125 HPE Sbjct: 63 HPE 65 >UniRef50_B5ZMC0 Putative uncharacterized protein n=1 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZMC0_GLUDA Length = 175 Score = 49.3 bits (116), Expect = 4e-05, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 35/88 (39%), Gaps = 8/88 (9%) Query: 42 ESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSR 101 E+++ A RA V+ + +RK+L L++++ + +G Sbjct: 90 EAVIADLGRAGIRAVHNDHRAEVD--------VAAIRKRLKLSRRQFALWYGLEEETIKG 141 Query: 102 YEKGNAQPHPSTIKLLRVLDKHPELLNE 129 +E G P + LR + PE + E Sbjct: 142 WESGERTPDTAARSYLRAIANQPEAVRE 169 >UniRef50_B8HYF2 Transcriptional regulator, XRE family n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HYF2_CYAP4 Length = 239 Score = 49.3 bits (116), Expect = 4e-05, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 27/55 (49%) Query: 64 VNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLR 118 V E + +R++L LTQ + + G + SR+EKG +P + L++ Sbjct: 159 VPTEPSTARLLQTLRQRLGLTQSQFAATLGVTLMTISRWEKGRGKPKRRFMPLIK 213 >UniRef50_UPI0001A43291 hypothetical protein PcarcW_16193 n=2 Tax=Pectobacterium carotovorum RepID=UPI0001A43291 Length = 109 Score = 48.9 bits (115), Expect = 5e-05, Method: Composition-based stats. Identities = 12/71 (16%), Positives = 32/71 (45%), Gaps = 1/71 (1%) Query: 52 AFMAQVKAFRASVN-AETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPH 110 + FR + A ++ I +R + ++Q + V + S++E+ +P Sbjct: 30 NNRVAAREFRERIEQAHAMSGAEIQNMRSRYKMSQSSLAYALNMSVESVSKWERNEKKPS 89 Query: 111 PSTIKLLRVLD 121 + ++LL +++ Sbjct: 90 GAALRLLNIIN 100 >UniRef50_B4S2A5 DNA-binding protein n=2 Tax=Gammaproteobacteria RepID=B4S2A5_ALTMD Length = 101 Score = 48.9 bits (115), Expect = 5e-05, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 45/98 (45%), Gaps = 5/98 (5%) Query: 25 RKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLT 84 ++++L +H E +M+K+ F A + + I +R+K ++ Sbjct: 2 KESILDVVHSTAKDLSEAGVMDKQTMHQFDALCLPKLKQYDG-----QRIKAIREKARVS 56 Query: 85 QKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 Q + + ++E+G+ +P +++KLL ++++ Sbjct: 57 QAVFAAYLNITPSTIKQWEQGSKKPRGTSLKLLSLVEQ 94 >UniRef50_Q1Q5F4 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q5F4_9BACT Length = 121 Score = 48.9 bits (115), Expect = 5e-05, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 23/41 (56%) Query: 70 APEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPH 110 + I ++R+KL TQ E ++ G + SR+E G +QP Sbjct: 2 GAKEIKELREKLGATQSEFAKALGISFSTVSRWESGISQPD 42 >UniRef50_C7H8I0 SOS-response transcriptional repressor n=4 Tax=Ruminococcaceae RepID=C7H8I0_9FIRM Length = 209 Score = 48.9 bits (115), Expect = 5e-05, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 68 TVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTI-KLLRVLD 121 PE + + RK+ ++Q E + + G A ++E G + P P+T+ KL +LD Sbjct: 1 MSFPELLRQCRKQKHMSQAELASLLGVTQQAVGKWESGKSSPDPTTVAKLAEILD 55 >UniRef50_A7ZY95 Helix-turn-helix DNA-binding domain protein n=17 Tax=Escherichia coli RepID=A7ZY95_ECOHS Length = 109 Score = 48.9 bits (115), Expect = 5e-05, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 40/93 (43%), Gaps = 8/93 (8%) Query: 43 SIMNKEESDAFMAQVKAFRASVNAETV-----APEFIVKVRKKLSLTQKEASEIFGGGVN 97 +M+ E DA VKA V+A E I +R + ++Q + G Sbjct: 19 GLMSDSEVDAIAVMVKA--REVSARIAKVKSMTGEEIKAIRTRYGMSQSVLAHTMGMSKE 76 Query: 98 AFSRYEKGNAQPHPSTIKLLR-VLDKHPELLNE 129 + S++E+ +P +++L + K PE+ + Sbjct: 77 SVSKWERNEIKPSGPALRILNTLAIKGPEVFAK 109 >UniRef50_Q203Z2 PQC542.18 n=1 Tax=Streptomyces lividans RepID=Q203Z2_STRLI Length = 88 Score = 48.9 bits (115), Expect = 5e-05, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 6/78 (7%) Query: 56 QVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHP---- 111 V A A +A PE ++RK LTQ+E + + G AF+R+E G A+P Sbjct: 7 AVDALLARPDA-LPPPEVRARLRKADDLTQQEVARVLGVTRVAFNRWEVGAAKPRRRHLE 65 Query: 112 STIKLL-RVLDKHPELLN 128 + +LL KHP + Sbjct: 66 AYTRLLAGWAAKHPNAVA 83 >UniRef50_C1D7U6 Virulence gene repressor RsaL n=6 Tax=Proteobacteria RepID=C1D7U6_LARHH Length = 103 Score = 48.9 bits (115), Expect = 5e-05, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 45/89 (50%), Gaps = 2/89 (2%) Query: 42 ESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSR 101 +++ ++ E + Q A R A TV+ + ++ +R +L L++ + Sbjct: 14 DALRDEREGKVTLRQHTAERKE--APTVSAQEVLALRTRLHLSRPVFARYLRTNERTLEN 71 Query: 102 YEKGNAQPHPSTIKLLRVLDKHPELLNEI 130 +E+G A+P+ L+R+++++P+ + + Sbjct: 72 WEQGRAKPNAQAALLIRMVERYPDTVQRL 100 >UniRef50_C9KJV6 Toxin-antitoxin system, antitoxin component, Xre family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJV6_9FIRM Length = 143 Score = 48.5 bits (114), Expect = 6e-05, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 27/51 (52%) Query: 69 VAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRV 119 + + + +RK+ L+Q E + I G A+++YE G + P +L ++ Sbjct: 3 LTAQRLRALRKREGLSQTEVARILGITRTAYNKYESGASAPSRKLRELAQL 53 >UniRef50_C0VMX9 Possible transcriptional regulator n=1 Tax=Acinetobacter sp. ATCC 27244 RepID=C0VMX9_9GAMM Length = 149 Score = 48.5 bits (114), Expect = 7e-05, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 30/54 (55%) Query: 69 VAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 ++ + +RK+++L+Q +EI G ++ +E ++ + +LLRV+ K Sbjct: 52 LSGAEVRFLRKEMNLSQNGLAEILGVSESSVRAWETHRSKIPKPSDRLLRVMYK 105 >UniRef50_A0L322 Transcriptional regulator, XRE family n=1 Tax=Shewanella sp. ANA-3 RepID=A0L322_SHESA Length = 103 Score = 48.5 bits (114), Expect = 7e-05, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 37/77 (48%) Query: 46 NKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKG 105 N M ++ A S + + E I +R++ ++Q + I + ++E+G Sbjct: 19 NGTMDQLTMRKIDALALSAKLDEMTAERIKNLREREHISQGVLATILNMSNESVQKWEQG 78 Query: 106 NAQPHPSTIKLLRVLDK 122 ++P + ++LL ++DK Sbjct: 79 KSKPQGAALRLLNMIDK 95 >UniRef50_Q1NR99 Helix-turn-helix motif n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NR99_9DELT Length = 107 Score = 48.2 bits (113), Expect = 7e-05, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 24/47 (51%) Query: 81 LSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELL 127 L L+Q E SE V +E+G P + LL+VLDK PE L Sbjct: 60 LGLSQVEFSERIDVSVGTIRNWEQGKHCPTGAAKTLLKVLDKTPEAL 106 >UniRef50_Q2Y8T7 Transcriptional regulator, XRE family n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y8T7_NITMU Length = 189 Score = 48.2 bits (113), Expect = 8e-05, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 6/58 (10%) Query: 71 PEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLN 128 I + R+KL L Q E +E+ G A ++E G QP + L+K E+L Sbjct: 9 ARIIREGREKLKLNQSELAELVGVSPQAVQQWESGATQPRG------KRLNKIAEVLK 60 >UniRef50_A9EN56 Transcriptional Regulator, XRE family protein n=2 Tax=Phaeobacter gallaeciensis RepID=A9EN56_9RHOB Length = 120 Score = 48.2 bits (113), Expect = 8e-05, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 36/90 (40%), Gaps = 5/90 (5%) Query: 46 NKEESDAFMAQVKAFRASVNAETVAPEFI-----VKVRKKLSLTQKEASEIFGGGVNAFS 100 ++ A ET+A + V++RK L ++Q+ FG + + Sbjct: 26 ADRDAIALQQMQDDISGKAPLETMASREVPMVDVVRLRKTLGMSQERFCSHFGFRLGSVR 85 Query: 101 RYEKGNAQPHPSTIKLLRVLDKHPELLNEI 130 +E+G P LLR+++ PE + Sbjct: 86 NWEQGRRLPERPARILLRMIEDDPERVERF 115 >UniRef50_C1TL47 Predicted transcriptional regulator n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL47_9BACT Length = 148 Score = 48.2 bits (113), Expect = 8e-05, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 9/66 (13%) Query: 74 IVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHP----STIKLLRV-----LDKHP 124 + K+RK+ TQK+ ++ G A+ YE G+ + P + KL +V L P Sbjct: 8 LKKIRKRSGFTQKQVAKHLGISERAYQHYEAGDRKISPEKLLAMAKLFQVSADYLLGNSP 67 Query: 125 ELLNEI 130 LL + Sbjct: 68 GLLKGL 73 >UniRef50_B3GN69 Putative HTH_XRE family transcription factor n=1 Tax=Zymomonas mobilis subsp. mobilis RepID=B3GN69_ZYMMO Length = 116 Score = 48.2 bits (113), Expect = 9e-05, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 41/83 (49%) Query: 45 MNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEK 104 M E+ + +A +N + I +R+KL ++QK +E F ++A +E+ Sbjct: 26 MTDEDIEQQIADNPDAAPLLNEKQQIGGMIQIIRRKLEMSQKAFAENFHLSIHALRDWEQ 85 Query: 105 GNAQPHPSTIKLLRVLDKHPELL 127 G +P T+ L V+ +P+++ Sbjct: 86 GRRKPEQGTLNYLYVIRDNPDIV 108 >UniRef50_C8WKY9 Transcriptional regulator, XRE family n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WKY9_EGGLE Length = 141 Score = 47.8 bits (112), Expect = 1e-04, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 39/107 (36%), Gaps = 14/107 (13%) Query: 22 FRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKL 81 ++G + G C + S+ A + E + ++RK Sbjct: 6 YKGAYST-----GYACDM-------GKSSEKNTPAYHDPLVQQYAFILG-ENLRQLRKAQ 52 Query: 82 SLTQKEASEIFGGGVNAFSRYEKGNAQPH-PSTIKLLRVLDKHPELL 127 LTQ+ + G G + S E+G P P IKL R L+ P L Sbjct: 53 GLTQERLGLMIGTGHSRISNIERGRVVPSVPDMIKLCRALEADPVEL 99 >UniRef50_B7UKA8 Predicted protein n=15 Tax=Enterobacteriaceae RepID=B7UKA8_ECO27 Length = 98 Score = 47.8 bits (112), Expect = 1e-04, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 29/58 (50%) Query: 74 IVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEIR 131 + +R+ L Q++ + G + +E QP + KLL +L +P ++N+++ Sbjct: 39 VKAIREATGLRQQDFAVAVGVSYDLVKSWETKRRQPTGAPRKLLLLLQANPFIINQLK 96 >UniRef50_A0KB55 Transcriptional regulator-like protein n=17 Tax=Burkholderiaceae RepID=A0KB55_BURCH Length = 106 Score = 47.8 bits (112), Expect = 1e-04, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 31/54 (57%) Query: 70 APEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKH 123 PE I ++RK ++++Q + + ++E+G+ +P ++L++++KH Sbjct: 47 DPEAIARIRKSVNVSQSVFALYLNTTTSTIRQWEQGDKRPSGIAARMLQIVEKH 100 >UniRef50_B8HJX4 Transcriptional regulator, XRE family n=2 Tax=Cyanothece sp. PCC 7425 RepID=B8HJX4_CYAP4 Length = 99 Score = 47.8 bits (112), Expect = 1e-04, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 24/42 (57%) Query: 74 IVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIK 115 I ++R+ + LTQ++ + + G +R+E + QP P +K Sbjct: 25 IRQIRQGMGLTQEQFAMVLGVTYTTVNRWENAHMQPSPLALK 66 >UniRef50_A7VY66 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VY66_9CLOT Length = 99 Score = 47.8 bits (112), Expect = 1e-04, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 6/62 (9%) Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 + I ++R+K TQK+ SE+ G + ++ YE G +P LRVL Sbjct: 2 RLEDEPLTFRFKIRQLREKYGYTQKKMSELLGVERSTYTYYETGKTEPS------LRVLR 55 Query: 122 KH 123 K Sbjct: 56 KM 57 >UniRef50_C7N355 Uncharacterized conserved protein n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N355_SLAHD Length = 436 Score = 47.8 bits (112), Expect = 1e-04, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 28/51 (54%) Query: 67 ETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLL 117 + +I +RK+ LTQ E +++ G A S++E G ++P +++ L Sbjct: 3 DYAFGNYIFHLRKQAGLTQAELAKLVGVTNKAVSKWEVGKSKPSVESVRKL 53 >UniRef50_Q8VR10 Cytosine-specific methyltransferase n=1 Tax=Bacteroides coprosuis RepID=Q8VR10_9BACE Length = 401 Score = 47.8 bits (112), Expect = 1e-04, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 4/57 (7%) Query: 72 EFIVKVRKKLSLTQKEASEIFG---GGVNAFSRYEKGNAQPHPSTIKLLRVLD-KHP 124 E++ RKKL +TQK+ S + G G +E G +P + IK L+ L+ HP Sbjct: 8 EYVRSKRKKLGVTQKQLSLLLGMKEVGERTVRSWEIGEHKPSKARIKRLQELNINHP 64 >UniRef50_A9BTE8 Transcriptional regulator, XRE family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BTE8_DELAS Length = 214 Score = 47.4 bits (111), Expect = 1e-04, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 3/73 (4%) Query: 46 NKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKG 105 + + F +V F ++ + + + RK+L L+Q+ + + G N S YE G Sbjct: 4 DAVDFAQFFGKVNRFTKKMDE---FSQRLREERKRLGLSQEAFASLGGVSKNTQSNYETG 60 Query: 106 NAQPHPSTIKLLR 118 P + +R Sbjct: 61 ANLPDVGYLNTIR 73 >UniRef50_UPI000197C515 hypothetical protein PretD1_18434 n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197C515 Length = 109 Score = 47.4 bits (111), Expect = 1e-04, Method: Composition-based stats. Identities = 11/61 (18%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Query: 68 TVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD-KHPEL 126 ++ I ++R + ++Q + G + S++E+ +P +++L +++ + PE+ Sbjct: 47 MMSGAQIKQLRAQYGMSQAMLALALGMSKESVSKWEREEKKPSGPALRMLHLIEQRGPEI 106 Query: 127 L 127 L Sbjct: 107 L 107 >UniRef50_B4W2P1 Helix-turn-helix domain protein n=2 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4W2P1_9CYAN Length = 165 Score = 47.4 bits (111), Expect = 1e-04, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 26/59 (44%) Query: 61 RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRV 119 + + E I +R+ + LTQ E ++ G S +E G +P ST K L + Sbjct: 90 QRVGDTVLWNAELIKALRRHMGLTQAEFAQRMGVRQKTVSNWEIGLYEPPLSTSKHLEL 148 >UniRef50_A4SL74 Transcriptional regulator, XRE family n=15 Tax=Gammaproteobacteria RepID=A4SL74_AERS4 Length = 94 Score = 47.4 bits (111), Expect = 1e-04, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 30/59 (50%) Query: 72 EFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEI 130 + +R L+++Q+E ++ G V+ +E P K+L ++ + P+L +E+ Sbjct: 33 ADVKAIRLALNVSQQEFAQALGTSVDTVKSWETRRRNPTGLAAKVLTLMQEKPDLYSEL 91 >UniRef50_A9N8E3 DNA-binding protein n=19 Tax=Bacteria RepID=A9N8E3_COXBR Length = 113 Score = 47.4 bits (111), Expect = 1e-04, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 35/82 (42%), Gaps = 5/82 (6%) Query: 41 EESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFS 100 + +++ F A ++P I ++R ++Q ++ V+ Sbjct: 30 DAGVIDATTMHEFDALCLTPVRE-----LSPREIKRIRIHEKVSQAVFAKYLNTSVSTVK 84 Query: 101 RYEKGNAQPHPSTIKLLRVLDK 122 ++E G P +++KLL ++D+ Sbjct: 85 QWELGEKHPRGTSLKLLNLVDR 106 >UniRef50_Q2RI62 Putative uncharacterized protein n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RI62_MOOTA Length = 84 Score = 47.4 bits (111), Expect = 1e-04, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Query: 3 CPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVK 58 CPVC G + + + + ++GR V++G+ C C E +++ S + Sbjct: 8 CPVCG-GTLEEKLIQLDFRYKGRLIVIEGVPAQVCKDCGEQLISARTSKDIDVLLD 62 >UniRef50_Q849G7 Putative regulatory protein n=1 Tax=Streptomyces violaceoruber RepID=Q849G7_STRVN Length = 78 Score = 47.4 bits (111), Expect = 1e-04, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 6/73 (8%) Query: 64 VNAETVAPEFIVK-VRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHP-----STIKLL 117 V+A + + + +R LTQ E ++ G A +R+E G +PH L Sbjct: 2 VDANILPSPHVRQQLRVAAGLTQAEVADAIGVQRVAVARWEAGLTRPHRTNRLKYAHFLR 61 Query: 118 RVLDKHPELLNEI 130 R+ +K+P + E+ Sbjct: 62 RLAEKYPAAVQEV 74 >UniRef50_A7NG24 Transcriptional regulator, XRE family n=2 Tax=Roseiflexus RepID=A7NG24_ROSCS Length = 110 Score = 47.4 bits (111), Expect = 1e-04, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 27/59 (45%) Query: 61 RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRV 119 R PE I +R+ + LTQ+E +++ S +E G PH ST K L + Sbjct: 8 RRRRATYVWKPEMIRALREHMDLTQRELADLLEVRQQTISEWETGLHTPHRSTQKTLSM 66 >UniRef50_C4SSE5 Predicted transcriptional regulator n=1 Tax=Yersinia frederiksenii ATCC 33641 RepID=C4SSE5_YERFR Length = 117 Score = 47.4 bits (111), Expect = 1e-04, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 34/93 (36%), Gaps = 12/93 (12%) Query: 34 GLYCVHCEESIMNKEESDAFMAQVKAFRASVNAET------VAPEFIVKVRKKLSLTQKE 87 G +C + + V ++ +A + I +R +++++QK Sbjct: 17 GYHCDVIDGEQFTSID------DVDGLHRLIDKIFVNRCNPLAADEIRFIRIEMNMSQKA 70 Query: 88 ASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVL 120 + + G V +R+EK + LR L Sbjct: 71 LAALLGVDVQTVARWEKEQTNLPRTAEVSLRAL 103 >UniRef50_A8STQ9 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8STQ9_9FIRM Length = 172 Score = 47.4 bits (111), Expect = 2e-04, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 2/78 (2%) Query: 53 FMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPS 112 + Q + + + + F+ K+RK+ +TQ+E + FG + SR+E GN P + Sbjct: 2 YDNQQRKEKTEMIDQVKIGNFLRKLRKEKGMTQEEIATKFGVSSRSVSRWENGNTMPDLA 61 Query: 113 TIKLLRVLDKHPELLNEI 130 L+ + D + + EI Sbjct: 62 I--LVELADYYDVDIREI 77 >UniRef50_O28162 Inosine monophosphate dehydrogenase (GuaB-2) n=2 Tax=Archaeoglobaceae RepID=O28162_ARCFU Length = 183 Score = 47.4 bits (111), Expect = 2e-04, Method: Composition-based stats. Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Query: 72 EFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTI-KLLRVLD 121 E I + RKKL L+QK+ +E+ G +R E G P S + K+LRVL+ Sbjct: 6 EEIRRKRKKLGLSQKKLAELVGVSQPLIARIEAGKFDPKLSLVKKMLRVLE 56 >UniRef50_C0QSB5 Transcriptional regulator, xre family n=1 Tax=Persephonella marina EX-H1 RepID=C0QSB5_PERMH Length = 159 Score = 47.0 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 71 PEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLL 117 + I ++RK L L+Q+E +E G + A +E P ST++L+ Sbjct: 5 GQRIKQLRKMLGLSQREFAEKIGKSLRAVQNWEYEQRTPDESTLRLI 51 >UniRef50_C0CY08 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CY08_9CLOT Length = 179 Score = 47.0 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 27/50 (54%) Query: 68 TVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLL 117 E + ++RK+ L+Q++ +E+ A S++E+G P T+ LL Sbjct: 1 MSFAEHLRQIRKEKGLSQEDLAELLDVSRQAVSKWEQGAGYPEVETLLLL 50 >UniRef50_B7GM93 Predicted transcriptional regulator, xre family n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GM93_ANOFW Length = 162 Score = 47.0 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 12/73 (16%) Query: 71 PEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHP----STIKLLRV-----LD 121 E I ++R TQ++ ++ + S++E G P L RV L Sbjct: 31 GEQIRRLRNAHDWTQEQLAQRLNVSRSKVSKWENGEVLPDLQSIIDMSDLFRVSTDFLLG 90 Query: 122 KHP---ELLNEIR 131 KHP +LL E+R Sbjct: 91 KHPTDEQLLQEVR 103 >UniRef50_Q89JN3 Bll5250 protein n=3 Tax=Bradyrhizobium RepID=Q89JN3_BRAJA Length = 100 Score = 47.0 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 24/59 (40%) Query: 69 VAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELL 127 + +R++ LTQ E + G V +E+G P LL V+ P+ + Sbjct: 35 TGSLAVRDLRRRACLTQMEFAAKLGVPVETIRNWEQGKRAPRGPARALLAVIAHAPDTV 93 >UniRef50_Q2G4Q6 Transcriptional regulator, XRE family n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2G4Q6_NOVAD Length = 166 Score = 47.0 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 50/109 (45%), Gaps = 11/109 (10%) Query: 18 IPYTFRGRKTVLKGIHGLY-CVHCEESIMNKE-----ESDAFMAQVKAFRASVNAETVAP 71 P +RG G+ G+Y C E ++ E + + +V A + + +T+AP Sbjct: 18 EPLLYRGC-----GLDGIYLCNGYEIEEIDGETFTYVQDREGLHKVIALNLAEHRKTLAP 72 Query: 72 EFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVL 120 + I +R + TQ +++ G +R+EKG + ++LRV+ Sbjct: 73 KEIRFMRVAIDHTQSSLAKVLGVSSQTVARWEKGQVEIPGPADRMLRVM 121 >UniRef50_B2I5D4 Transcriptional regulator, XRE family n=8 Tax=Xylella fastidiosa RepID=B2I5D4_XYLF2 Length = 110 Score = 47.0 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 28/53 (52%) Query: 68 TVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVL 120 T++ I +RK+L L+Q E + G + +E+G A + K++RVL Sbjct: 51 TLSGAEIRFMRKELELSQPEFAACLGTTTQTLAAWEEGRAALPDAADKMIRVL 103 >UniRef50_B7KUC3 Transcriptional regulator, XRE family n=6 Tax=Bacteria RepID=B7KUC3_METC4 Length = 111 Score = 47.0 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 29/57 (50%) Query: 73 FIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNE 129 + +R+ L L+Q+E + F + +E+G +P + L V+ ++P ++E Sbjct: 49 QVRIIRRALGLSQEEFASRFQIPLGTLRDWEQGRKEPDAAARAYLVVIGRNPRAVSE 105 >UniRef50_B7QUY4 Putative uncharacterized protein n=1 Tax=Ruegeria sp. R11 RepID=B7QUY4_9RHOB Length = 122 Score = 47.0 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 29/57 (50%) Query: 74 IVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEI 130 +V++RK L ++Q+ FG + + +E+G P LLR+++ PE + Sbjct: 61 VVRLRKSLGMSQERFCSHFGFRLGSVRNWEQGRRLPERPARILLRMIEDDPERVERF 117 >UniRef50_Q6ALK0 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6ALK0_DESPS Length = 206 Score = 46.6 bits (109), Expect = 2e-04, Method: Composition-based stats. Identities = 16/137 (11%), Positives = 42/137 (30%), Gaps = 18/137 (13%) Query: 1 MKCPVCHQGEMVSGIKDIPYTFRGRKTVLK-GIHGLYCVHCE-ESIMNKEESDAFMAQVK 58 + CP C + + C C + + + + + Sbjct: 4 LTCPACGSHNITQQKEIKKIFTDHLDKETHIETLYEECQECGMDGEFSIDNDEIINNALA 63 Query: 59 AFRASVNAETVAP----EFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTI 114 R+ ++ + + + + L L Q+ S+++ G +P S Sbjct: 64 DTRSETISKILTELSNHHSLAGIERSLDLPQR-----------TLSKWKNG-TKPTRSGT 111 Query: 115 KLLRVLDKHPELLNEIR 131 L++++ P L+ + Sbjct: 112 TLVKLIAIFPWLIKIAQ 128 >UniRef50_Q044U0 Transcriptional regulator, xre family n=3 Tax=root RepID=Q044U0_LACGA Length = 74 Score = 46.6 bits (109), Expect = 2e-04, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 4/52 (7%) Query: 72 EFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHP----STIKLLRV 119 + +R LTQ E ++ G SR+E+G A P P + KL + Sbjct: 3 RELKSLRVGAGLTQTELAKRLGVTNVTVSRWERGEAIPKPKYIKAMAKLFNI 54 >UniRef50_A8YX20 Phage associated protein n=3 Tax=Lactobacillus RepID=A8YX20_LACH4 Length = 244 Score = 46.6 bits (109), Expect = 2e-04, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 36/65 (55%), Gaps = 1/65 (1%) Query: 65 NAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHP 124 + ++P+ + K R K+ ++Q++ +EI G N + YE G P + ++L+ L + Sbjct: 16 DMGLISPKDLKKYRSKVGISQRDLAEITGLSPNTIALYEAGEF-PAVANNRMLKSLFSND 74 Query: 125 ELLNE 129 ++L E Sbjct: 75 DVLKE 79 >UniRef50_Q24LF2 Putative uncharacterized protein n=1 Tax=Clostridium phage phi CD119 RepID=Q24LF2_9CAUD Length = 72 Score = 46.6 bits (109), Expect = 2e-04, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 30/46 (65%) Query: 72 EFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLL 117 + I VRK++++TQK+ + +FG A+ YE G+ +P+ T+ L+ Sbjct: 6 DNIKLVRKQMNMTQKQFASLFGISERAYQYYEAGSREPNLETLILI 51 >UniRef50_A7B1I5 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B1I5_RUMGN Length = 120 Score = 46.6 bits (109), Expect = 2e-04, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 22/51 (43%) Query: 74 IVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHP 124 I ++RKKL LTQ E G S+YE G+ + L + P Sbjct: 12 IAELRKKLGLTQTRLGEEIGVSQQTISKYENGDENIPGDMLLALSKFFRVP 62 >UniRef50_Q3M3V5 Transcriptional regulator, XRE family n=3 Tax=Bacteria RepID=Q3M3V5_ANAVT Length = 82 Score = 46.6 bits (109), Expect = 2e-04, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 1/53 (1%) Query: 71 PEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLR-VLDK 122 +FI ++R + LTQ+E + I G +R+E G+ +P I+ + +LDK Sbjct: 15 GQFIQEIRLVMGLTQEEFAVILGVTFPTVNRWENGHTKPSKLAIQQIEALLDK 67 >UniRef50_C9KLU7 Toxin-antitoxin system, antitoxin component, Xre family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KLU7_9FIRM Length = 189 Score = 46.6 bits (109), Expect = 2e-04, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 23/43 (53%) Query: 68 TVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPH 110 V + + +RKK LTQ E S+ G G +A YE G +P+ Sbjct: 1 MVFADRLRALRKKSGLTQDEFSKQTGIGRSAVGMYESGKREPN 43 >UniRef50_B9Y5F9 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y5F9_9FIRM Length = 353 Score = 46.6 bits (109), Expect = 2e-04, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 4/51 (7%) Query: 72 EFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPH----PSTIKLLR 118 E I + RK+L LTQ +E+ G A +++E GN+ P P +LL+ Sbjct: 5 EVIRQRRKELGLTQDRVAELLGVSAPAVNKWENGNSYPDITLLPPLARLLK 55 >UniRef50_A9L1Q6 DNA-binding protein n=7 Tax=Proteobacteria RepID=A9L1Q6_SHEB9 Length = 101 Score = 46.6 bits (109), Expect = 2e-04, Method: Composition-based stats. Identities = 10/81 (12%), Positives = 29/81 (35%) Query: 43 SIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRY 102 + + + + + I ++R +++Q + V++ ++ Sbjct: 14 GLHDAGVMKTSTMREFDELCLPEIKVLTAAEIKRIRVANNVSQPVFAHCLNVSVSSVQKW 73 Query: 103 EKGNAQPHPSTIKLLRVLDKH 123 E+G P + LL ++ K Sbjct: 74 EQGTRHPDGPALTLLNLVKKQ 94 >UniRef50_C4Z4H6 Putative uncharacterized protein n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z4H6_EUBE2 Length = 294 Score = 46.6 bits (109), Expect = 3e-04, Method: Composition-based stats. Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Query: 70 APEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTI-KLLRVLD 121 E I R K TQ E ++ G A SR+EKG++ P S I +L RVLD Sbjct: 6 TGELIKSARIKKGYTQVELGDLLGVTNKAISRWEKGDSFPDISVIEELSRVLD 58 >UniRef50_B2J239 Transcriptional regulator, XRE family n=3 Tax=Cyanobacteria RepID=B2J239_NOSP7 Length = 84 Score = 46.6 bits (109), Expect = 3e-04, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 27/48 (56%) Query: 71 PEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLR 118 + I ++R++L L+Q++ + G + +R+E G+ P +KL+ Sbjct: 10 SDLIRELRQQLDLSQEKFAAKLGVSLRTVNRWENGSTVPSQMALKLIE 57 >UniRef50_A8RCT6 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RCT6_9FIRM Length = 110 Score = 46.6 bits (109), Expect = 3e-04, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 60 FRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPH-PSTIKLLR 118 ++ + + E + VRK+ L+Q ++ G S +E G ++P+ + KL Sbjct: 3 LKSIIRKIIMFNEKLKAVRKQKGLSQAALGKLLGVQTQTISNWENGKSEPNLKTINKLCE 62 Query: 119 VLD 121 LD Sbjct: 63 ALD 65 >UniRef50_B0MKY5 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MKY5_9FIRM Length = 159 Score = 46.6 bits (109), Expect = 3e-04, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Query: 72 EFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 E + ++RK LTQ + +EI G ++++ +YE+ P L ++ D Sbjct: 3 EQLQQLRKSRGLTQDDLAEILGISLSSYQKYERDAISPS--YETLCKIAD 50 >UniRef50_B4SF25 Putative uncharacterized protein n=1 Tax=Pelodictyon phaeoclathratiforme BU-1 RepID=B4SF25_PELPB Length = 70 Score = 46.2 bits (108), Expect = 3e-04, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 21/71 (29%), Gaps = 1/71 (1%) Query: 1 MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAF 60 M C C G M GI +G L I C C E ++ E +A + Sbjct: 1 MNCMYC-SGNMERGIAPFHTDRKGYHITLDRIPAWVCAQCGEVYFDEPEVEAIQEVLCTL 59 Query: 61 RASVNAETVAP 71 + Sbjct: 60 DQRTEKLVKSA 70 >UniRef50_P69202 Repressor protein C2 n=23 Tax=root RepID=RPC2_BPP22 Length = 216 Score = 46.2 bits (108), Expect = 3e-04, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Query: 69 VAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPS-TIKLLRVLDKHPELL 127 + E I RKKL + Q ++ G A S++E+ +P+ + L + L P+ L Sbjct: 5 LMGERIRARRKKLKIRQAALGKMVGVSNVAISQWERSETEPNGENLLALSKALQCSPDYL 64 >UniRef50_C7N7P9 Predicted transcriptional regulator n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N7P9_SLAHD Length = 141 Score = 46.2 bits (108), Expect = 3e-04, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 5/64 (7%) Query: 71 PEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKH---PELL 127 E I +R+ LTQKE + G +A YE G P +L + D PE L Sbjct: 4 GERIRALRRSAGLTQKELAASIGLTESAVRNYELGLRTPSD--DQLAAMADSIGVAPEAL 61 Query: 128 NEIR 131 +IR Sbjct: 62 MDIR 65 >UniRef50_B7KUW4 Transcriptional regulator, XRE family n=3 Tax=Methylobacterium RepID=B7KUW4_METC4 Length = 97 Score = 46.2 bits (108), Expect = 3e-04, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 27/56 (48%) Query: 74 IVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNE 129 + VR+ +L+Q + G V +E+ +P LL +L+K+P L+ E Sbjct: 38 VAAVRRASALSQDAFARRIGVAVGTLRNWEQRRRRPEGPARVLLALLEKNPRLVEE 93 >UniRef50_A8SNW9 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SNW9_9FIRM Length = 242 Score = 46.2 bits (108), Expect = 3e-04, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 68 TVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 + I + RKK L Q+E +E G A S++E+ A P +L+ + + Sbjct: 2 LLIGSRIQEYRKKAGLNQEEFAEKMGVSRQAVSKWERDKAYPD--LDRLVCICE 53 >UniRef50_Q46NP6 Helix-turn-helix motif n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46NP6_RALEJ Length = 113 Score = 46.2 bits (108), Expect = 3e-04, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 33/90 (36%), Gaps = 12/90 (13%) Query: 45 MNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEK 104 M + R + ET E + R+ +TQ+E +E+ A SR E+ Sbjct: 4 WTNHLIKKRMVALAGVRRDMKLETAFGEAVKIKRRAAGMTQEEFAEVLEMNQQAISRLER 63 Query: 105 GNAQPHPSTI------------KLLRVLDK 122 G P + + LLR+ ++ Sbjct: 64 GVVSPSLTMVARVAVALRTRPSTLLRLAER 93 >UniRef50_A9KUS5 Transcriptional regulator, XRE family n=1 Tax=Shewanella baltica OS195 RepID=A9KUS5_SHEB9 Length = 204 Score = 46.2 bits (108), Expect = 3e-04, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 28/58 (48%) Query: 71 PEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLN 128 E + K+RK L +TQ + +++ + + E+G+ + + L + L PE L Sbjct: 4 AERVRKLRKALGMTQYQLADLVSTAQTSIQKLERGDTKNPRNIEALAKALQTTPEFLR 61 >UniRef50_C0EBZ8 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0EBZ8_9CLOT Length = 172 Score = 46.2 bits (108), Expect = 3e-04, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 4/57 (7%) Query: 71 PEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPH----PSTIKLLRVLDKH 123 PE I + RKK+ L+Q++ +E G A +++E G A P S + +V + Sbjct: 11 PEKIQRERKKMGLSQEKLAEKIGVSRQAITKWENGLASPELEKIVSLSECFKVSTDY 67 >UniRef50_A0YJB7 Putative uncharacterized protein n=4 Tax=Lyngbya sp. PCC 8106 RepID=A0YJB7_9CYAN Length = 92 Score = 46.2 bits (108), Expect = 3e-04, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 30/55 (54%) Query: 64 VNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLR 118 +N + P I+ +RK+L L+Q++ + G +R+E+G QP ++ ++ Sbjct: 6 INMKKSIPILILTLRKRLGLSQEKLATQLGVSFQTVNRWERGRTQPSHLALQAIK 60 >UniRef50_C6VMP8 Transcription regulator n=4 Tax=Lactobacillus plantarum RepID=C6VMP8_LACPJ Length = 195 Score = 46.2 bits (108), Expect = 3e-04, Method: Composition-based stats. Identities = 9/59 (15%), Positives = 29/59 (49%) Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVL 120 + V + ++R+ ++Q + +++ V +E+ + QP + ++L+++L Sbjct: 43 SEVMKMKTTATILKEIRQHYQISQAKLAKLLNTSVRTVQHWEQADYQPSGTAVRLIQIL 101 >UniRef50_B4B443 Transcriptional regulator, XRE family n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B443_9CHRO Length = 83 Score = 46.2 bits (108), Expect = 4e-04, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 32/63 (50%), Gaps = 5/63 (7%) Query: 74 IVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVL-----DKHPELLN 128 I +R +L +TQ++ + G +R+E G+ QP ++L+ L ++ E L Sbjct: 18 IRSIRLELGMTQEQFAAYLGVVYPTVNRWENGHTQPSLMALRLIEKLLIDLGERGQEFLQ 77 Query: 129 EIR 131 +++ Sbjct: 78 QLQ 80 >UniRef50_UPI0001C3E5CC protein of unknown function DUF955 n=1 Tax=Zymomonas mobilis subsp. mobilis ZM4 RepID=UPI0001C3E5CC Length = 401 Score = 46.2 bits (108), Expect = 4e-04, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 40/76 (52%) Query: 49 ESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQ 108 E++ ++ + R++ + + PE + RK + L+Q+E + G A S++E+G+ Sbjct: 3 ETNDNVSDILTARSNKDRRFLIPERLKDARKFMRLSQEELGKEIGVSRQAISQFERGDRN 62 Query: 109 PHPSTIKLLRVLDKHP 124 P T+ ++ + K P Sbjct: 63 PDARTLVGIQSVLKQP 78 >UniRef50_C8WMU4 Transcriptional regulator, XRE family n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WMU4_EGGLE Length = 64 Score = 46.2 bits (108), Expect = 4e-04, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 21/48 (43%) Query: 68 TVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIK 115 E + RK+LS+TQ E ++ G +R+E G P K Sbjct: 1 MTFGEMVKYARKQLSMTQTELAKALGVSFATVNRWENGQVNPSSLAQK 48 >UniRef50_B2V2D3 Transcriptional regulator n=1 Tax=Clostridium botulinum E3 str. Alaska E43 RepID=B2V2D3_CLOBA Length = 134 Score = 45.8 bits (107), Expect = 4e-04, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 20/44 (45%) Query: 68 TVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHP 111 + I +RK LTQ + I G G S YE GN+ P+ Sbjct: 2 FTLADRIKDLRKSKKLTQTDLGRILGVGKTTISMYENGNSTPND 45 >UniRef50_A1SIU0 Helix-turn-helix domain protein n=1 Tax=Nocardioides sp. JS614 RepID=A1SIU0_NOCSJ Length = 146 Score = 45.8 bits (107), Expect = 4e-04, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 4/56 (7%) Query: 69 VAPEFIVKVRKKLSLTQKEASEIFG--GGVNAFSRYEKGNAQPHPS-TIKLLRVLD 121 + P + R+K LTQ E + + G GG SR+E G + P P +KL R LD Sbjct: 5 LDPSVLRAAREKAGLTQHELARLVGAAGGER-ISRWELGASVPRPDFLVKLARALD 59 >UniRef50_B9K2R1 Putative uncharacterized protein n=1 Tax=Agrobacterium vitis S4 RepID=B9K2R1_AGRVS Length = 64 Score = 45.8 bits (107), Expect = 4e-04, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 74 IVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLL-RVLDKH 123 + +R L +TQ E + G + S++E G A+P S L+ ++ ++H Sbjct: 7 VKAIRADLKMTQAEFASEVGVSQSMVSQWETGTAKPRGSATILIGQLRERH 57 >UniRef50_B7KHR6 Transcriptional regulator, XRE family n=2 Tax=Cyanothece RepID=B7KHR6_CYAP7 Length = 87 Score = 45.8 bits (107), Expect = 4e-04, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 40/70 (57%), Gaps = 12/70 (17%) Query: 74 IVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLL------------RVLD 121 I +R++++LTQ++ + + G +R+EKG+A P P IK++ ++++ Sbjct: 18 IRNLRQEMNLTQEQFAMMVGVVFTTVNRWEKGHANPSPMAIKMISMKLQQLGEKGEKLIE 77 Query: 122 KHPELLNEIR 131 K+ + +EIR Sbjct: 78 KYAAVASEIR 87 >UniRef50_C8Q2C3 Transcriptional regulator, XRE family n=1 Tax=Pantoea sp. At-9b RepID=C8Q2C3_9ENTR Length = 109 Score = 45.8 bits (107), Expect = 4e-04, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 2/76 (2%) Query: 55 AQVKAFRASVNA-ETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPST 113 Q++ RAS+ E + E I +R + L+Q + V S++E+G +P+ + Sbjct: 33 VQLRELRASLPVIEEMNGEAIRSLRDRFHLSQAMLALYVNMSVVTVSKWERGEKKPNGAA 92 Query: 114 IKLLR-VLDKHPELLN 128 +++L + K P++ Sbjct: 93 LRVLNTMAIKGPDVFA 108 >UniRef50_A7HZA9 DNA-binding protein n=24 Tax=Bacteria RepID=A7HZA9_PARL1 Length = 107 Score = 45.8 bits (107), Expect = 4e-04, Method: Composition-based stats. Identities = 12/81 (14%), Positives = 31/81 (38%) Query: 42 ESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSR 101 E + + D ++P I +R++ ++Q + Sbjct: 20 EGLFRRGLIDKTTMSGFDVLCLEPVRDLSPRKIKSLRERHKVSQPVFAAYLNVSAATVKA 79 Query: 102 YEKGNAQPHPSTIKLLRVLDK 122 +E+G +P ++KLL ++++ Sbjct: 80 WEQGAKKPAGPSLKLLNLIER 100 >UniRef50_UPI0001C37439 XRE family transcriptional regulator n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37439 Length = 223 Score = 45.8 bits (107), Expect = 4e-04, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 26/48 (54%) Query: 70 APEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLL 117 + I ++R +L +TQK+ +E A S++E+GN P S + L Sbjct: 28 TGQLIKRLRTELGMTQKQLAERINVSDKAVSKWERGNGCPDVSLLSAL 75 >UniRef50_A8R7R1 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8R7R1_9FIRM Length = 227 Score = 45.8 bits (107), Expect = 4e-04, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 9/58 (15%) Query: 73 FIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPST---------IKLLRVLD 121 FI RK+ LTQ++ E+ G + S++E G + P PS I L+ + D Sbjct: 10 FIATCRKEKGLTQEQLGELLGVTNKSISKWENGKSLPDPSLYKPLCDILEINLIELFD 67 >UniRef50_A5ZTD7 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZTD7_9FIRM Length = 349 Score = 45.8 bits (107), Expect = 4e-04, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 33/58 (56%) Query: 60 FRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLL 117 S ++ + I+K+R+ L+Q++ +EI G A SR+E G + P+ +T+ L+ Sbjct: 1 MNRSKDSNQNIAKTILKIRQDNKLSQEQFAEIVGVTRQAVSRWEMGISAPNINTLILM 58 >UniRef50_C7GBK6 Transcriptional regulator of NagC/XylR family, sugar n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GBK6_9FIRM Length = 403 Score = 45.8 bits (107), Expect = 5e-04, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 18/43 (41%) Query: 68 TVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPH 110 E I R K L Q E +E G A S++E G + P Sbjct: 26 MTMAENIKTYRNKRGLNQYEFAEKLGISPQAVSKWECGQSCPS 68 >UniRef50_O69899 Putative transcriptional regulator n=1 Tax=Streptomyces coelicolor RepID=O69899_STRCO Length = 71 Score = 45.5 bits (106), Expect = 5e-04, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 64 VNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 + A T +P+ + ++R++ +TQ + + G A S YE G+ +P L + D Sbjct: 1 MPARTFSPDALRQIRRQRGVTQYKLAASLGVHNTAISHYENGHRRPD--VETLATIAD 56 >UniRef50_D2QEV1 Transcriptional regulator, XRE family n=2 Tax=Spirosoma linguale DSM 74 RepID=D2QEV1_9SPHI Length = 68 Score = 45.5 bits (106), Expect = 5e-04, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Query: 65 NAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 + + + I RK LTQKE +E G + ++YE G + + L+++ + Sbjct: 3 DIKQITSTQIRDARKAKGLTQKELAEKLGVSESTVNQYESGK--QNLTIDTLVKIANA 58 >UniRef50_C9L4G8 Toxin-antitoxin system, antitoxin component, Xre family n=2 Tax=Clostridiales RepID=C9L4G8_RUMHA Length = 86 Score = 45.5 bits (106), Expect = 5e-04, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Query: 72 EFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPS-TIKLLRVLDK 122 E + K+R+ L+Q + +E G V + +YE+G+ + LLR+ Sbjct: 12 EKLQKLRQAAGLSQSQLAEAAGVNVRMYQKYEQGDRDISKAQLSTLLRICKA 63 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q46864 Uncharacterized HTH-type transcriptional regulat... 145 3e-34 UniRef50_C6MW82 Transcriptional regulator, XRE family n=1 Tax=Ge... 135 4e-31 UniRef50_C0GU77 Transcriptional regulator with HTH domain protei... 134 8e-31 UniRef50_B9W0T3 Transcriptional regulator n=2 Tax=Shewanella Rep... 132 3e-30 UniRef50_Q07J16 Transcriptional regulator, XRE family n=2 Tax=Pr... 129 3e-29 UniRef50_A1BG77 Transcriptional regulator, XRE family n=7 Tax=Ch... 127 1e-28 UniRef50_Q2LYD1 Transcriptional regulator with HTH domain n=1 Ta... 125 5e-28 UniRef50_Q2Y6W9 Transcriptional regulator, XRE family n=2 Tax=Ni... 123 1e-27 UniRef50_A7BW93 Transcriptional regulator, XRE family n=1 Tax=Be... 123 2e-27 UniRef50_C7RJM0 Transcriptional regulator, XRE family n=1 Tax=Ca... 123 2e-27 UniRef50_C6P435 Transcriptional regulator, XRE family n=1 Tax=Si... 121 9e-27 UniRef50_C4XJ50 Xre family DNA-binding protein n=3 Tax=Desulfovi... 120 2e-26 UniRef50_C6N7W9 Transcriptional regulator n=1 Tax=Legionella dra... 119 3e-26 UniRef50_A5GA93 Helix-turn-helix domain protein n=1 Tax=Geobacte... 118 5e-26 UniRef50_A4U5T1 Transcriptional regulator, XRE family n=1 Tax=Ma... 117 1e-25 UniRef50_Q1IJ02 Transcriptional regulator, XRE family n=2 Tax=Ba... 117 2e-25 UniRef50_A5G9X9 Putative uncharacterized protein n=1 Tax=Geobact... 116 3e-25 UniRef50_A7BUF7 Transcriptional regulator, Cro/CI family n=1 Tax... 115 3e-25 UniRef50_Q1QEY5 Transcriptional regulator, XRE family n=1 Tax=Ni... 115 5e-25 UniRef50_B8GT54 Transcriptional regulator, XRE family n=1 Tax=Th... 108 5e-23 UniRef50_A7BYA6 Transcriptional regulator protein n=1 Tax=Beggia... 107 1e-22 UniRef50_C5V7T9 Putative uncharacterized protein n=1 Tax=Gallion... 106 2e-22 UniRef50_C3K4N6 Putative uncharacterized protein n=1 Tax=Pseudom... 105 3e-22 UniRef50_C9KLV8 Toxin-antitoxin system, antitoxin component, Xre... 105 4e-22 UniRef50_C9P136 Putative uncharacterized protein n=1 Tax=Vibrio ... 105 7e-22 UniRef50_Q0A690 Putative uncharacterized protein n=1 Tax=Alkalil... 104 7e-22 UniRef50_D0SHI7 Transcriptional regulator n=1 Tax=Acinetobacter ... 103 1e-21 UniRef50_A4E6W9 Putative uncharacterized protein n=1 Tax=Collins... 103 1e-21 UniRef50_C3JZL6 Putative uncharacterized protein n=1 Tax=Pseudom... 103 2e-21 UniRef50_A0LH57 Transcriptional regulator, XRE family n=1 Tax=Sy... 102 4e-21 UniRef50_Q4KHV0 Putative uncharacterized protein n=1 Tax=Pseudom... 98 8e-20 UniRef50_Q58KB7 ORF170 n=2 Tax=Bacteria RepID=Q58KB7_9BACT 98 1e-19 UniRef50_A4XM96 Helix-turn-helix domain protein n=2 Tax=Clostrid... 96 3e-19 UniRef50_B2AJ70 Putative uncharacterized protein n=1 Tax=Cupriav... 94 1e-18 UniRef50_D2C8D5 Transcriptional regulator, XRE family n=1 Tax=Th... 92 5e-18 UniRef50_D2QQQ8 Transcriptional regulator, XRE family n=1 Tax=Sp... 92 6e-18 UniRef50_C6LB00 Toxin-antitoxin system, antitoxin component, Xre... 90 2e-17 UniRef50_C6VTF5 Helix-turn-helix domain-containing protein n=1 T... 89 4e-17 UniRef50_A1BCL4 Helix-turn-helix domain protein n=2 Tax=Chlorobi... 89 5e-17 UniRef50_C0XBS2 Phage associated protein n=1 Tax=Lactobacillus g... 89 5e-17 UniRef50_C8PU52 Transcriptional regulator, XRE family n=2 Tax=En... 89 6e-17 UniRef50_A4J0H7 Putative uncharacterized protein n=1 Tax=Desulfo... 89 6e-17 UniRef50_Q1N9W5 Transcriptional regulator, XRE family protein n=... 89 6e-17 UniRef50_C5CDA8 Transcriptional regulator, XRE family n=1 Tax=Ko... 88 8e-17 UniRef50_A6TLM4 Putative uncharacterized protein n=1 Tax=Alkalip... 88 9e-17 UniRef50_A5G3N3 Putative uncharacterized protein n=1 Tax=Geobact... 88 1e-16 UniRef50_C8W2H4 Putative phage-associated protein n=1 Tax=Desulf... 85 5e-16 UniRef50_A1VJ81 Helix-turn-helix domain protein n=11 Tax=Proteob... 85 7e-16 UniRef50_Q2L0I8 Putative DNA-binding protein n=2 Tax=Proteobacte... 85 9e-16 UniRef50_A6W266 Helix-turn-helix domain protein n=2 Tax=Gammapro... 84 1e-15 UniRef50_B8G1P7 Helix-turn-helix domain-containing protein n=2 T... 84 1e-15 UniRef50_UPI0001AF457D hypothetical protein Psyrpo1_28742 n=1 Ta... 84 1e-15 UniRef50_UPI0000382ADF COG2944: Predicted transcriptional regula... 84 1e-15 UniRef50_C2D085 Transcriptional regulator phage-related n=1 Tax=... 84 2e-15 UniRef50_B5EAM0 Putative uncharacterized protein n=1 Tax=Geobact... 84 2e-15 UniRef50_C2CWL5 Prophage ps3 protein 01 n=1 Tax=Gardnerella vagi... 83 2e-15 UniRef50_Q1DFX0 Conserved domain protein n=1 Tax=Myxococcus xant... 83 3e-15 UniRef50_C2HQE2 Phage-like transcriptional regulator protein n=5... 83 3e-15 UniRef50_A7HHQ8 Helix-turn-helix domain protein n=1 Tax=Anaeromy... 83 3e-15 UniRef50_Q2RXN6 Transcriptional regulator, XRE family n=1 Tax=Rh... 82 6e-15 UniRef50_C3QME8 Helix-turn-helix domain-containing protein n=2 T... 81 8e-15 UniRef50_A1U7F0 Virulence gene repressor RsaL n=4 Tax=Proteobact... 81 9e-15 UniRef50_C6Q836 Transcriptional regulator, XRE family n=1 Tax=Th... 81 1e-14 UniRef50_D2BLB0 Phage protein, transcriptional regulator, Cro/CI... 80 1e-14 UniRef50_Q5P4X5 DNA-binding protein n=8 Tax=Proteobacteria RepID... 80 2e-14 UniRef50_Q2RPT5 Transcriptional regulator, XRE family n=3 Tax=Al... 80 2e-14 UniRef50_B6WV39 Putative uncharacterized protein n=1 Tax=Desulfo... 80 2e-14 UniRef50_C2EVP3 Phage associated protein n=10 Tax=Lactobacillus ... 79 4e-14 UniRef50_A2RP91 Predicted helix-turn-helix containing protein n=... 79 4e-14 UniRef50_B6IPE3 DNA-binding protein, putative n=1 Tax=Rhodospiri... 79 5e-14 UniRef50_B0KAX5 Transcriptional regulator, XRE family n=5 Tax=Th... 79 5e-14 UniRef50_C0GQR0 Transcriptional regulator, XRE family n=1 Tax=De... 79 6e-14 UniRef50_A9BHQ9 Helix-turn-helix domain protein n=1 Tax=Petrotog... 79 6e-14 UniRef50_Q1YRR7 Helix-turn-helix motif protein n=2 Tax=gamma pro... 79 6e-14 UniRef50_B8FKT9 Putative transcriptional regulator, XRE family n... 78 8e-14 UniRef50_C1AE28 Xre family DNA binding protein n=1 Tax=Gemmatimo... 78 9e-14 UniRef50_B0BVA4 Transcriptional repressor n=9 Tax=spotted fever ... 78 1e-13 UniRef50_C6HUS9 Helix-turn-helix domain protein n=2 Tax=Leptospi... 78 1e-13 UniRef50_A6Q854 Putative uncharacterized protein n=1 Tax=Sulfuro... 77 2e-13 UniRef50_Q39YW3 Transcriptional regulator, XRE family n=10 Tax=P... 77 2e-13 UniRef50_A5G7I8 Helix-turn-helix domain protein n=2 Tax=Proteoba... 77 3e-13 UniRef50_Q1NLC9 Helix-turn-helix motif n=12 Tax=cellular organis... 76 3e-13 UniRef50_A3DFY7 Uncharacterized phage-associated protein-like pr... 76 3e-13 UniRef50_A3XE19 Transcriptional regulator, XRE family protein n=... 76 3e-13 UniRef50_Q7N0B1 Similar to unknown protein n=6 Tax=Enterobacteri... 76 4e-13 UniRef50_B4TA30 DNA-binding protein n=47 Tax=Proteobacteria RepI... 75 5e-13 UniRef50_Q1QKM4 Transcriptional regulator, XRE family n=3 Tax=Br... 75 6e-13 UniRef50_D1RWL1 Putative uncharacterized protein n=1 Tax=Serrati... 75 7e-13 UniRef50_B0P3V7 Putative uncharacterized protein n=1 Tax=Clostri... 75 7e-13 UniRef50_Q3B427 Transcriptional regulator, XRE family n=6 Tax=Ba... 75 8e-13 UniRef50_B1ZE25 Transcriptional regulator, XRE family n=8 Tax=Ba... 74 1e-12 UniRef50_A7HZA9 DNA-binding protein n=24 Tax=Bacteria RepID=A7HZ... 74 1e-12 UniRef50_Q1YM79 Putative uncharacterized protein n=1 Tax=Auranti... 74 1e-12 UniRef50_B9ZKV2 Transcriptional regulator, XRE family n=1 Tax=Th... 74 1e-12 UniRef50_B2FJQ1 Putative DNA-binding protein n=1 Tax=Stenotropho... 74 1e-12 UniRef50_B1TDU4 Putative uncharacterized protein n=1 Tax=Burkhol... 74 1e-12 UniRef50_C6N0S5 XRE family transcriptional regulator n=1 Tax=Leg... 74 1e-12 UniRef50_A7HUI5 Helix-turn-helix domain protein n=1 Tax=Parvibac... 74 1e-12 UniRef50_A9L1Q6 DNA-binding protein n=7 Tax=Proteobacteria RepID... 74 1e-12 UniRef50_B2UKR2 Transcriptional regulator, XRE family n=1 Tax=Ak... 74 1e-12 UniRef50_Q9KMA5 Antitoxin higA-2 n=32 Tax=Proteobacteria RepID=H... 74 1e-12 UniRef50_A8GWH9 Putative transcriptional regulator n=2 Tax=Ricke... 74 2e-12 UniRef50_Q0AU89 Putative uncharacterized protein n=1 Tax=Syntrop... 74 2e-12 UniRef50_C1TS72 Predicted transcriptional regulator, COG2944 n=1... 74 2e-12 UniRef50_C7JIU1 Transcriptional regulator Xre n=8 Tax=Acetobacte... 74 2e-12 UniRef50_D1AHE8 Putative uncharacterized protein n=1 Tax=Sebalde... 73 2e-12 UniRef50_A8GG35 Transcriptional regulator, XRE family n=2 Tax=Pr... 73 2e-12 UniRef50_B0T885 Transcriptional regulator, XRE family n=2 Tax=Al... 73 3e-12 UniRef50_C6MUZ5 Transcriptional regulator, XRE family n=1 Tax=Ge... 73 3e-12 UniRef50_A7BVU4 Putative uncharacterized protein n=1 Tax=Beggiat... 73 3e-12 UniRef50_A9IKE0 Putative DNA-binding protein n=1 Tax=Bartonella ... 73 3e-12 UniRef50_A3V8Z5 Transcriptional regulator, XRE family n=2 Tax=Ba... 73 3e-12 UniRef50_C0GWH0 Transcriptional regulator, XRE family n=4 Tax=Pr... 73 3e-12 UniRef50_Q1I9J8 Putative transcriptional regulator n=1 Tax=Pseud... 73 4e-12 UniRef50_C6S831 Putative transcriptional regulator n=2 Tax=Neiss... 73 4e-12 UniRef50_B3EG51 Transcriptional regulator, XRE family n=5 Tax=Ch... 72 4e-12 UniRef50_B8IBQ3 Transcriptional regulator, XRE family n=1 Tax=Me... 72 4e-12 UniRef50_C8Q118 Transcriptional regulator, XRE family n=1 Tax=En... 72 4e-12 UniRef50_Q6MCF7 Putative uncharacterized protein n=2 Tax=Candida... 72 4e-12 UniRef50_Q01NF8 Transcriptional regulator, XRE family n=1 Tax=Ca... 72 5e-12 UniRef50_Q88NK9 Transcriptional regulator, Cro/CI family n=56 Ta... 72 5e-12 UniRef50_A1WP30 Transcriptional regulator, XRE family n=4 Tax=Pr... 72 5e-12 UniRef50_B3GN69 Putative HTH_XRE family transcription factor n=1... 72 6e-12 UniRef50_Q73NN7 DNA-binding protein, putative n=1 Tax=Treponema ... 72 7e-12 UniRef50_C8WN21 Transcriptional regulator, XRE family n=1 Tax=Eg... 72 7e-12 UniRef50_C4Z706 Putative uncharacterized protein n=3 Tax=Clostri... 72 8e-12 UniRef50_B4S2A5 DNA-binding protein n=2 Tax=Gammaproteobacteria ... 71 9e-12 UniRef50_Q2SMC7 Predicted transcriptional regulator n=1 Tax=Hahe... 71 1e-11 UniRef50_A9N8E3 DNA-binding protein n=19 Tax=Bacteria RepID=A9N8... 71 1e-11 UniRef50_C4SSE5 Predicted transcriptional regulator n=1 Tax=Yers... 71 1e-11 UniRef50_B8ILW2 Transcriptional regulator, XRE family n=1 Tax=Me... 71 1e-11 UniRef50_A8V2S1 Putative uncharacterized protein n=1 Tax=Hydroge... 71 1e-11 UniRef50_Q89JN3 Bll5250 protein n=3 Tax=Bradyrhizobium RepID=Q89... 71 1e-11 UniRef50_B8F4C3 Predicted helix-turn-helix containing protein n=... 71 1e-11 UniRef50_Q2IXH5 Transcriptional regulator, XRE family n=6 Tax=Br... 70 1e-11 UniRef50_Q9JXT5 Helix-turn-helix family protein n=1 Tax=Neisseri... 70 2e-11 UniRef50_C4ZEX8 Putative uncharacterized protein n=2 Tax=Clostri... 70 2e-11 UniRef50_A7ZY95 Helix-turn-helix DNA-binding domain protein n=17... 70 2e-11 UniRef50_Q6ALK0 Putative uncharacterized protein n=1 Tax=Desulfo... 70 2e-11 UniRef50_B5UX67 Prophage ps3 protein 01, putative n=10 Tax=Firmi... 70 2e-11 UniRef50_Q0G0M0 DNA-binding protein n=1 Tax=Fulvimarina pelagi H... 70 3e-11 UniRef50_B1Z950 Putative uncharacterized protein n=1 Tax=Methylo... 70 3e-11 UniRef50_C7JJ64 Transcriptional regulator Xre n=8 Tax=Acetobacte... 70 3e-11 UniRef50_B2ICD7 Transcriptional regulator, XRE family n=2 Tax=Rh... 69 3e-11 UniRef50_A6Q853 Putative uncharacterized protein n=1 Tax=Sulfuro... 69 4e-11 UniRef50_A0KB55 Transcriptional regulator-like protein n=17 Tax=... 69 5e-11 UniRef50_D2LEA3 Transcriptional regulator, XRE family n=1 Tax=Rh... 69 5e-11 UniRef50_A0S0K2 Helix-turn-helix motif protein n=1 Tax=Acinetoba... 69 6e-11 UniRef50_A1AZA3 Transcriptional regulator, XRE family n=3 Tax=Ba... 69 6e-11 UniRef50_A1U433 Helix-turn-helix domain protein n=2 Tax=Gammapro... 69 6e-11 UniRef50_Q3B4L5 Transcriptional regulator, XRE family n=2 Tax=Ch... 69 6e-11 UniRef50_Q2IEG7 Transcriptional regulator, XRE family n=1 Tax=An... 69 6e-11 UniRef50_A9EN56 Transcriptional Regulator, XRE family protein n=... 68 8e-11 UniRef50_B7KUC3 Transcriptional regulator, XRE family n=6 Tax=Ba... 68 8e-11 UniRef50_C1A4Y5 Putative uncharacterized protein n=1 Tax=Gemmati... 68 1e-10 UniRef50_B3QWV0 Transcriptional regulator, XRE family n=3 Tax=Ba... 68 1e-10 UniRef50_Q1WR49 Putative uncharacterized protein n=1 Tax=Lactoba... 68 1e-10 UniRef50_C2XDJ5 Prophage ps3 protein 01 n=1 Tax=Bacillus cereus ... 68 1e-10 UniRef50_A5V2L1 Transcriptional regulator, XRE family n=31 Tax=B... 67 1e-10 UniRef50_B6IPD8 Transcriptional regulatory protein TyrR n=1 Tax=... 67 1e-10 UniRef50_Q6MB64 Putative uncharacterized protein n=2 Tax=Candida... 67 1e-10 UniRef50_B7KUW4 Transcriptional regulator, XRE family n=3 Tax=Me... 67 2e-10 UniRef50_B5ZMC0 Putative uncharacterized protein n=1 Tax=Glucona... 67 2e-10 UniRef50_B7UR20 Predicted regulatory protein n=20 Tax=Gammaprote... 67 2e-10 UniRef50_A0LNU8 Transcriptional regulator, XRE family n=2 Tax=Pr... 67 2e-10 UniRef50_Q5HXG4 Putative uncharacterized protein n=2 Tax=Alphapr... 67 3e-10 UniRef50_A0L322 Transcriptional regulator, XRE family n=1 Tax=Sh... 67 3e-10 UniRef50_B0T0J0 Transcriptional regulator, XRE family n=2 Tax=Al... 66 3e-10 UniRef50_C6N1Q6 Putative uncharacterized protein n=1 Tax=Legione... 66 3e-10 UniRef50_C8WG12 Transcriptional regulator, XRE family n=2 Tax=Zy... 66 3e-10 UniRef50_Q1Q5F4 Putative uncharacterized protein n=1 Tax=Candida... 66 3e-10 UniRef50_C0VJ40 Helix-turn-helix XRE family protein n=1 Tax=Acin... 66 3e-10 UniRef50_B4B443 Transcriptional regulator, XRE family n=1 Tax=Cy... 66 3e-10 UniRef50_B4SDH0 Transcriptional regulator, XRE family n=1 Tax=Pe... 66 4e-10 UniRef50_B7QUY4 Putative uncharacterized protein n=1 Tax=Ruegeri... 66 4e-10 UniRef50_Q2G4Q6 Transcriptional regulator, XRE family n=1 Tax=No... 65 5e-10 UniRef50_D1Y8M5 Helix-turn-helix domain protein n=1 Tax=Pyramido... 65 6e-10 UniRef50_B6JDP2 Transcriptional regulator of XRE family n=1 Tax=... 65 7e-10 UniRef50_C2LEY4 Regulatory protein n=4 Tax=Enterobacteriaceae Re... 65 7e-10 UniRef50_Q1NRF9 Virulence gene repressor RsaL n=9 Tax=Proteobact... 65 7e-10 UniRef50_C8Q2C3 Transcriptional regulator, XRE family n=1 Tax=Pa... 65 9e-10 UniRef50_A8HTF6 Putative transcriptional regulator n=1 Tax=Azorh... 65 9e-10 UniRef50_A0B4W6 Transcriptional regulator, XRE family n=3 Tax=Bu... 65 9e-10 UniRef50_Q1NR99 Helix-turn-helix motif n=1 Tax=delta proteobacte... 64 1e-09 UniRef50_C1D7U6 Virulence gene repressor RsaL n=6 Tax=Proteobact... 64 1e-09 UniRef50_A4SL74 Transcriptional regulator, XRE family n=15 Tax=G... 64 1e-09 UniRef50_UPI000197C515 hypothetical protein PretD1_18434 n=1 Tax... 64 1e-09 UniRef50_B7UKA8 Predicted protein n=15 Tax=Enterobacteriaceae Re... 64 2e-09 UniRef50_C7BSN7 Putative uncharacterized protein n=1 Tax=Photorh... 64 2e-09 UniRef50_C0CY08 Putative uncharacterized protein n=1 Tax=Clostri... 63 4e-09 UniRef50_Q6FBH4 Putative uncharacterized protein n=1 Tax=Acineto... 62 4e-09 UniRef50_C8WL78 Transcriptional regulator, XRE family n=1 Tax=Eg... 62 4e-09 UniRef50_B2J239 Transcriptional regulator, XRE family n=3 Tax=Cy... 62 5e-09 UniRef50_C6XH36 Putative uncharacterized protein n=1 Tax=Candida... 62 5e-09 UniRef50_A8STQ9 Putative uncharacterized protein n=1 Tax=Coproco... 62 5e-09 UniRef50_C7H8I0 SOS-response transcriptional repressor n=4 Tax=R... 62 5e-09 UniRef50_B8HYF2 Transcriptional regulator, XRE family n=1 Tax=Cy... 62 5e-09 UniRef50_C0VMX9 Possible transcriptional regulator n=1 Tax=Acine... 62 5e-09 UniRef50_A6DKJ3 Transcriptional regulator-like protein n=1 Tax=L... 62 6e-09 UniRef50_A0YQ49 Putative uncharacterized protein n=1 Tax=Lyngbya... 62 6e-09 UniRef50_B4W2P1 Helix-turn-helix domain protein n=2 Tax=Microcol... 62 7e-09 UniRef50_A9BTE8 Transcriptional regulator, XRE family n=1 Tax=De... 62 8e-09 UniRef50_B5W498 Transcriptional regulator, XRE family n=2 Tax=Ar... 62 8e-09 UniRef50_C8WKY9 Transcriptional regulator, XRE family n=1 Tax=Eg... 61 1e-08 UniRef50_B1ZSG3 Transcriptional regulator, XRE family n=1 Tax=Op... 61 1e-08 UniRef50_C8WMU4 Transcriptional regulator, XRE family n=1 Tax=Eg... 61 1e-08 UniRef50_Q3M3V5 Transcriptional regulator, XRE family n=3 Tax=Ba... 61 1e-08 UniRef50_C5ESI5 Predicted protein n=1 Tax=Clostridiales bacteriu... 61 1e-08 UniRef50_P0A9V7 Uncharacterized HTH-type transcriptional regulat... 61 1e-08 UniRef50_C6VMP8 Transcription regulator n=4 Tax=Lactobacillus pl... 61 1e-08 UniRef50_A8RCT6 Putative uncharacterized protein n=1 Tax=Eubacte... 60 1e-08 UniRef50_B8HJX4 Transcriptional regulator, XRE family n=2 Tax=Cy... 60 2e-08 UniRef50_UPI0001A43291 hypothetical protein PcarcW_16193 n=2 Tax... 60 2e-08 UniRef50_C7N0U4 Predicted transcriptional regulator n=1 Tax=Slac... 60 2e-08 UniRef50_C7N2T6 Predicted transcriptional regulator n=1 Tax=Slac... 60 2e-08 UniRef50_B6WXX6 Putative uncharacterized protein n=1 Tax=Desulfo... 60 2e-08 UniRef50_A6LU60 Prophage ps3 protein 01, putative n=1 Tax=Clostr... 60 2e-08 UniRef50_A8ZRN8 N-6 DNA methylase n=14 Tax=cellular organisms Re... 60 2e-08 UniRef50_Q1NQ27 Helix-turn-helix motif n=1 Tax=delta proteobacte... 60 2e-08 UniRef50_B4B219 Transcriptional regulator, XRE family n=1 Tax=Cy... 60 2e-08 UniRef50_B2I5D4 Transcriptional regulator, XRE family n=8 Tax=Xy... 60 3e-08 UniRef50_A0YJB7 Putative uncharacterized protein n=4 Tax=Lyngbya... 60 3e-08 UniRef50_B1I2S9 Helix-turn-helix domain protein n=3 Tax=Clostrid... 60 3e-08 UniRef50_B9K2R1 Putative uncharacterized protein n=1 Tax=Agrobac... 60 3e-08 UniRef50_Q3R7W9 Helix-turn-helix motif n=1 Tax=Xylella fastidios... 60 3e-08 UniRef50_D0IHU8 Putative uncharacterized protein n=1 Tax=Vibrio ... 59 4e-08 UniRef50_C1FA11 DNA-binding protein n=1 Tax=Acidobacterium capsu... 59 4e-08 UniRef50_A5ZTD7 Putative uncharacterized protein n=1 Tax=Ruminoc... 59 4e-08 UniRef50_Q24LF2 Putative uncharacterized protein n=1 Tax=Clostri... 59 4e-08 UniRef50_A7NG24 Transcriptional regulator, XRE family n=2 Tax=Ro... 59 4e-08 UniRef50_A7H3K3 Transcriptional regulator, Cro/CI family n=1 Tax... 59 5e-08 UniRef50_D2TX49 Phage transcriptional regulator n=1 Tax=Arsenoph... 59 5e-08 Sequences not found previously or not previously below threshold: UniRef50_A4VWF1 Putative uncharacterized protein n=8 Tax=Lactoba... 64 2e-09 UniRef50_B0A9T9 Putative uncharacterized protein n=3 Tax=Firmicu... 63 4e-09 UniRef50_C9L3X9 Toxin-antitoxin system, antitoxin component, Xre... 62 7e-09 UniRef50_C7H5C0 Putative prophage ps3 protein 01 n=1 Tax=Faecali... 62 7e-09 UniRef50_C8PQ89 Transcriptional regulator, XRE family n=1 Tax=Tr... 61 1e-08 UniRef50_A1WQC3 Transcriptional regulator, XRE family n=1 Tax=Ve... 60 2e-08 UniRef50_C9A4E1 Predicted protein n=3 Tax=Enterococcus casselifl... 60 2e-08 UniRef50_Q12J32 Transciptional regulator n=10 Tax=Shewanella Rep... 60 2e-08 UniRef50_C6JC03 Transcriptional regulator n=9 Tax=Clostridiales ... 60 2e-08 UniRef50_Q2G3X3 Putative prophage repressor n=1 Tax=Novosphingob... 60 2e-08 UniRef50_C0C2T3 Putative uncharacterized protein n=1 Tax=Clostri... 60 2e-08 UniRef50_B6GBG4 Putative uncharacterized protein n=2 Tax=Collins... 60 2e-08 UniRef50_C0BEF9 Putative uncharacterized protein n=2 Tax=Clostri... 60 3e-08 UniRef50_B7C7R8 Putative uncharacterized protein n=2 Tax=Erysipe... 60 3e-08 UniRef50_D1N218 Transcriptional regulator, XRE family n=1 Tax=Vi... 59 4e-08 UniRef50_C0WMN7 Possible XRE family transcriptional regulator n=... 59 4e-08 UniRef50_A8U6K1 Possible transcriptional regulator n=1 Tax=Carno... 59 5e-08 UniRef50_Q8UI35 Transcriptional regulator n=2 Tax=Rhizobium/Agro... 59 5e-08 >UniRef50_Q46864 Uncharacterized HTH-type transcriptional regulator ygiT n=58 Tax=Proteobacteria RepID=YGIT_ECOLI Length = 131 Score = 145 bits (367), Expect = 3e-34, Method: Composition-based stats. Identities = 131/131 (100%), Positives = 131/131 (100%) Query: 1 MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAF 60 MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAF Sbjct: 1 MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAF 60 Query: 61 RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVL 120 RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVL Sbjct: 61 RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVL 120 Query: 121 DKHPELLNEIR 131 DKHPELLNEIR Sbjct: 121 DKHPELLNEIR 131 >UniRef50_C6MW82 Transcriptional regulator, XRE family n=1 Tax=Geobacter sp. M18 RepID=C6MW82_9DELT Length = 154 Score = 135 bits (340), Expect = 4e-31, Method: Composition-based stats. Identities = 47/131 (35%), Positives = 76/131 (58%), Gaps = 3/131 (2%) Query: 1 MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAF 60 M+CP C Q EMV+ ++D T+ G+ L + G +C C+E I + + + A Sbjct: 1 MRCPACGQ-EMVAEVRDETLTYGGQSLTLHAMQGEFCTGCDEGIWDAQSYRRYTEAQSAL 59 Query: 61 RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVL 120 +V + + I ++RK L LTQ E ++ FG G AFSRYE+G +P +KLL+++ Sbjct: 60 VRTVKGDISS--DIRRIRKNLKLTQTELADAFGVGKVAFSRYERGETRPPAPLVKLLKLI 117 Query: 121 DKHPELLNEIR 131 ++HPELL E++ Sbjct: 118 ERHPELLKEMQ 128 >UniRef50_C0GU77 Transcriptional regulator with HTH domain protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GU77_9DELT Length = 167 Score = 134 bits (337), Expect = 8e-31, Method: Composition-based stats. Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 1/130 (0%) Query: 1 MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAF 60 M CPVC +G + +K + ++G+ ++ L C CEE ++ E+S F ++ AF Sbjct: 7 MSCPVCGKGYIQRHLKREEFEYKGQAKIIDDYPLLICDACEEEFVSAEDSRLFDKELTAF 66 Query: 61 RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVL 120 + V+ P+ I +R+KL Q + + G F+RYE G + L+R+L Sbjct: 67 QRKVDGLL-TPDEIRSIREKLGYNQTSFARLLKVGEKNFARYETGVSPQSRYLDWLMRIL 125 Query: 121 DKHPELLNEI 130 + +PE + I Sbjct: 126 NDYPETIKTI 135 >UniRef50_B9W0T3 Transcriptional regulator n=2 Tax=Shewanella RepID=B9W0T3_9GAMM Length = 135 Score = 132 bits (332), Expect = 3e-30, Method: Composition-based stats. Identities = 50/129 (38%), Positives = 76/129 (58%), Gaps = 2/129 (1%) Query: 2 KCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 CP C +G + KD Y ++G ++ G+YC CEE+I+ A ++ FR Sbjct: 8 TCPFCGEGHLNLSTKDKEYNYQGHTLLIPQ-PGIYCDVCEEAILEPSHLKATRVDLQEFR 66 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 A ++ V P I K+RK++ L Q+EA+ + GGG NAFSRYE+G P + +LL++ D Sbjct: 67 ARIDG-IVGPRAIRKIRKQIGLNQQEAALLLGGGKNAFSRYEQGELSPPKAVSQLLKLFD 125 Query: 122 KHPELLNEI 130 KHPEL+ E+ Sbjct: 126 KHPELVKEL 134 >UniRef50_Q07J16 Transcriptional regulator, XRE family n=2 Tax=Proteobacteria RepID=Q07J16_RHOP5 Length = 134 Score = 129 bits (324), Expect = 3e-29, Method: Composition-based stats. Identities = 42/129 (32%), Positives = 68/129 (52%), Gaps = 4/129 (3%) Query: 3 CPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRA 62 CP MV + + T++G+ + + G YC ESI ++ ++ + Sbjct: 7 CPETG-LPMVRDTRPMTITYKGQSATI-AMPGWYCDESGESIHTGDDMQVSDEALRDLKN 64 Query: 63 SVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 + + I ++RKK+ LTQ+EA IFGGG NAF +YE+G+ + LLRVL+K Sbjct: 65 KAD--ILDGAEIRRIRKKIGLTQREAGAIFGGGPNAFQKYEQGSVTVSKAMSNLLRVLEK 122 Query: 123 HPELLNEIR 131 HPE + E++ Sbjct: 123 HPEEVEELK 131 >UniRef50_A1BG77 Transcriptional regulator, XRE family n=7 Tax=Chlorobiaceae RepID=A1BG77_CHLPD Length = 136 Score = 127 bits (318), Expect = 1e-28, Method: Composition-based stats. Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 2/129 (1%) Query: 2 KCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 +CP C M+ + + T+ G+ L +HG +C C E I ++E + + Sbjct: 7 QCPSCGHKGMIDKVLEETLTYGGKSMTLHDMHGRFCPECGEGIWDEESCRRYTEAQEGLV 66 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 ++ + A I ++R+KL LTQ + + FG G AFSRYE+G +P +KLL+++D Sbjct: 67 RAIKGDPAA--DIRRIRRKLKLTQAQLASSFGVGKVAFSRYERGETRPPAPLLKLLKLID 124 Query: 122 KHPELLNEI 130 +HP+LLNEI Sbjct: 125 RHPDLLNEI 133 >UniRef50_Q2LYD1 Transcriptional regulator with HTH domain n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LYD1_SYNAS Length = 182 Score = 125 bits (314), Expect = 5e-28, Method: Composition-based stats. Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 1/130 (0%) Query: 2 KCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 KC +C + + + ++G+K + C C E+I++ +K F+ Sbjct: 12 KCSICGAESLTRKVGTESFEYKGKKKEIPNYVTYECSECGEAIVDSATLKESGKILKDFQ 71 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 V+ P+ I +R KL LTQ++ + I GGG+ + +RYE G LLR+LD Sbjct: 72 REVDGLLTGPQ-IKAIRIKLGLTQEQLANIIGGGLKSVARYESGQVCQSKGMDNLLRILD 130 Query: 122 KHPELLNEIR 131 +P+ L I+ Sbjct: 131 AYPQTLKIIQ 140 >UniRef50_Q2Y6W9 Transcriptional regulator, XRE family n=2 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y6W9_NITMU Length = 157 Score = 123 bits (310), Expect = 1e-27, Method: Composition-based stats. Identities = 64/133 (48%), Positives = 87/133 (65%), Gaps = 2/133 (1%) Query: 1 MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKE-ESDAFMAQVKA 59 M+C +C +GE+V+G +D+P+T++G+KT +K I G YC C E E + D MA + Sbjct: 1 MRCSLCGKGEVVAGTRDVPFTYKGQKTFIKNIRGEYCNRCGEGYYGPEHDGDILMAGYRE 60 Query: 60 FRASVNAETVAPE-FIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLR 118 FR V+ F+ +VRKKL L Q+EA EIFGGGVNAFSRYE G + S ++L Sbjct: 61 FREKVDTVLAEQATFVEQVRKKLGLDQREAGEIFGGGVNAFSRYETGKVRTPVSVMQLFT 120 Query: 119 VLDKHPELLNEIR 131 +LD+HPELL EIR Sbjct: 121 LLDRHPELLEEIR 133 >UniRef50_A7BW93 Transcriptional regulator, XRE family n=1 Tax=Beggiatoa sp. PS RepID=A7BW93_9GAMM Length = 139 Score = 123 bits (309), Expect = 2e-27, Method: Composition-based stats. Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 2/129 (1%) Query: 2 KCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 +CP+C G + YT++G + G +C C+E I+N + +A Q++ F+ Sbjct: 4 ECPLCKTGFLERKTIKEMYTYKGHSIEI-EQPGEFCNVCDEGILNSTDLNATEKQIRDFQ 62 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 + ++ A E I KVR+KL L+Q EA+EI G N FSRYE+G P S LL +L+ Sbjct: 63 SKIDGLLTASE-IRKVRQKLKLSQFEAAEICGNDPNTFSRYERGEEIPQRSISNLLMILN 121 Query: 122 KHPELLNEI 130 HPELL E+ Sbjct: 122 NHPELLLEL 130 >UniRef50_C7RJM0 Transcriptional regulator, XRE family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RJM0_9PROT Length = 136 Score = 123 bits (308), Expect = 2e-27, Method: Composition-based stats. Identities = 51/130 (39%), Positives = 71/130 (54%), Gaps = 3/130 (2%) Query: 3 CPVCHQGE-MVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 C C G + G +D+ T G + + G +C C + E F A + A R Sbjct: 7 CLQCDDGSVLQHGAQDMMITIDGMSQTVPAVVGWHCPTCGTCEFDDGEGKRFSATLAALR 66 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 NA+ A + +RKKL L Q +A +FGGG +AFS YE+G QPH ST+ LL++LD Sbjct: 67 QLANAQRAAS--LRAIRKKLGLRQADAGRLFGGGASAFSEYERGKTQPHKSTVLLLKLLD 124 Query: 122 KHPELLNEIR 131 +HPELL E+R Sbjct: 125 RHPELLEELR 134 >UniRef50_C6P435 Transcriptional regulator, XRE family n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P435_9PROT Length = 132 Score = 121 bits (303), Expect = 9e-27, Method: Composition-based stats. Identities = 51/128 (39%), Positives = 78/128 (60%), Gaps = 2/128 (1%) Query: 3 CPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRA 62 C C +G+MV KD +RG + +++ + G +C C E +E + ++ R Sbjct: 5 CLNCEKGDMVRTKKDSEIEYRGHRAIVRALDGWHCPECGEVEFAGKEGVRYAEALEKLRL 64 Query: 63 SVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 ++AE A + ++RKKL L+Q+ A+ I GGGVNAFSRYE G A+P + + L R+L+K Sbjct: 65 KIDAEESA--ELARIRKKLKLSQRRAAAIAGGGVNAFSRYENGKARPVAAVVNLFRLLEK 122 Query: 123 HPELLNEI 130 HPELL+EI Sbjct: 123 HPELLDEI 130 >UniRef50_C4XJ50 Xre family DNA-binding protein n=3 Tax=Desulfovibrio RepID=C4XJ50_DESMR Length = 135 Score = 120 bits (300), Expect = 2e-26, Method: Composition-based stats. Identities = 40/129 (31%), Positives = 70/129 (54%), Gaps = 4/129 (3%) Query: 5 VCHQG--EMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRA 62 +CH+ EMV ++ + ++++G+ + + G YC C E + + + + A +A Sbjct: 1 MCHEDGIEMVRDVRPVEFSYKGQTMTV-AMPGWYCPKCGEGLYTRADMKVSDRALNAMKA 59 Query: 63 SVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 P+ + ++RKKL LTQ A ++ GGG AF++YEKG+A + LL+VLD Sbjct: 60 RCEGLLDGPQ-VKRIRKKLGLTQAAAGDLIGGGPKAFTKYEKGDALTSRAVTNLLKVLDA 118 Query: 123 HPELLNEIR 131 P+ L +R Sbjct: 119 VPDALTILR 127 >UniRef50_C6N7W9 Transcriptional regulator n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N7W9_9GAMM Length = 147 Score = 119 bits (299), Expect = 3e-26, Method: Composition-based stats. Identities = 43/128 (33%), Positives = 72/128 (56%), Gaps = 2/128 (1%) Query: 3 CPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRA 62 CP+C + + Y ++G + L+C C E +++ E++ A +++ R+ Sbjct: 6 CPICGELAASHEERSTTYHYKGHAFCIMQ-PALWCDSCGEGVISPEDNKATALEIQGHRS 64 Query: 63 SVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 ++ + P I K+RK L+L QK+AS +FGGG+N+F+RYE+G LL +LDK Sbjct: 65 RIDG-ILTPNEIAKIRKHLNLNQKDASRLFGGGINSFNRYERGTNPIPKPLSMLLVLLDK 123 Query: 123 HPELLNEI 130 HPE L E+ Sbjct: 124 HPEQLQEL 131 >UniRef50_A5GA93 Helix-turn-helix domain protein n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5GA93_GEOUR Length = 140 Score = 118 bits (296), Expect = 5e-26, Method: Composition-based stats. Identities = 52/130 (40%), Positives = 76/130 (58%), Gaps = 3/130 (2%) Query: 2 KCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 CP C QG + +K + +R G +C C E I+ +E+ A + + F Sbjct: 9 TCPACFQGTLEHRVKRTQFEYRSNILEY-DQEGAWCGTCGEGIVTGKEAAAAESLLDDFI 67 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 A V+ E + + ++RKKL L QKEA+ I GGG NAFSRYE+G A+P + + L R+LD Sbjct: 68 ARVDKEEAS--ELARIRKKLGLNQKEAAMIAGGGHNAFSRYERGEARPVAAVVNLFRLLD 125 Query: 122 KHPELLNEIR 131 +HPELLNE++ Sbjct: 126 RHPELLNELK 135 >UniRef50_A4U5T1 Transcriptional regulator, XRE family n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U5T1_9PROT Length = 136 Score = 117 bits (294), Expect = 1e-25, Method: Composition-based stats. Identities = 46/129 (35%), Positives = 71/129 (55%), Gaps = 4/129 (3%) Query: 2 KCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 C C EMV I+ + +T++G + G YC C E ++ E+S A+ AFR Sbjct: 5 TCHECG-AEMVRDIRPMEFTYKGHTLTV-QQPGWYC-ACGEGVLTPEDSAVTQAEYVAFR 61 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 V+ + P + ++RK+L L QK+A + GGG +AF +YE+ + +P + LLR+LD Sbjct: 62 DQVDG-ILPPAEVRRIRKRLGLQQKQAGVVLGGGASAFGKYERKDGKPSLAMSNLLRLLD 120 Query: 122 KHPELLNEI 130 K P L EI Sbjct: 121 KDPSRLQEI 129 >UniRef50_Q1IJ02 Transcriptional regulator, XRE family n=2 Tax=Bacteria RepID=Q1IJ02_ACIBL Length = 155 Score = 117 bits (292), Expect = 2e-25, Method: Composition-based stats. Identities = 44/132 (33%), Positives = 67/132 (50%), Gaps = 4/132 (3%) Query: 2 KCPVCHQGEMVSGIKDIPYTFR--GRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKA 59 KC C +++ +T + T + G+ G CV C E + + + A A Sbjct: 4 KCVSCASAKVMVPFSSETFTIKYGAATTKISGLSGWKCVACGEVEFDARSAKRYAAAGDA 63 Query: 60 FRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRV 119 + E + ++R+KL LTQ A+ + GGG NAFSRYE+G P S + L R+ Sbjct: 64 LVIAQRKEL--GTELRRIRRKLGLTQASAARLTGGGHNAFSRYERGEVIPMSSVVNLFRL 121 Query: 120 LDKHPELLNEIR 131 LDKHPELL +++ Sbjct: 122 LDKHPELLKDLK 133 >UniRef50_A5G9X9 Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G9X9_GEOUR Length = 168 Score = 116 bits (290), Expect = 3e-25, Method: Composition-based stats. Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 2/129 (1%) Query: 2 KCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 +CP+C G++ +T++G++ G C C E + K+ A +++ F Sbjct: 10 QCPLC-IGKLKETSVTEKFTYKGKELEYPGYIVHECDRCGEQFVGKKTMKASAKRLRDFY 68 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 V+ + + I ++R KL L Q ASE+ GGG +F+RYE + + LLRVL Sbjct: 69 REVDGLLTSCQ-IKEIRLKLGLNQGAASELLGGGAKSFARYENCDVIQSEAMDNLLRVLK 127 Query: 122 KHPELLNEI 130 P+LL I Sbjct: 128 DSPDLLKVI 136 >UniRef50_A7BUF7 Transcriptional regulator, Cro/CI family n=1 Tax=Beggiatoa sp. PS RepID=A7BUF7_9GAMM Length = 140 Score = 115 bits (289), Expect = 3e-25, Method: Composition-based stats. Identities = 34/130 (26%), Positives = 66/130 (50%), Gaps = 1/130 (0%) Query: 2 KCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 +CP+C +++ Y ++G L I C C ++ +S A+++ Sbjct: 7 RCPMCESADLIPKKIIEHYCYKGHDFSLADIEYAECPKCHSEVITPGQSTRNEARIRDEH 66 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 ++ I+++R++L +TQ +A++IFG VNAFS+YE G A + + KL+++ Sbjct: 67 RKIDGL-FTRAEIIQLREQLKITQNQAAQIFGEHVNAFSKYESGEATQNKAMDKLMKLAL 125 Query: 122 KHPELLNEIR 131 P+ E+R Sbjct: 126 NMPQCFEELR 135 >UniRef50_Q1QEY5 Transcriptional regulator, XRE family n=1 Tax=Nitrobacter hamburgensis X14 RepID=Q1QEY5_NITHX Length = 142 Score = 115 bits (287), Expect = 5e-25, Method: Composition-based stats. Identities = 39/131 (29%), Positives = 72/131 (54%), Gaps = 3/131 (2%) Query: 1 MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAF 60 M P + + G++ + T++G+ + + G Y + ++ I ++ A ++ Sbjct: 12 MVSPETGE-TLRRGVRPLIVTYKGKSITV-ELPGYYPDNGDDGIHVGDDMAITDAALRIL 69 Query: 61 RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVL 120 + + +P I +VR+KL L+Q+EA + G NAF +YE+G +P T +LLR+L Sbjct: 70 KEEIEG-IPSPATIRRVREKLKLSQREAGGLLKVGENAFDKYERGLVEPSGPTSQLLRLL 128 Query: 121 DKHPELLNEIR 131 D+HPELL ++R Sbjct: 129 DQHPELLEDLR 139 >UniRef50_B8GT54 Transcriptional regulator, XRE family n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GT54_THISH Length = 132 Score = 108 bits (271), Expect = 5e-23, Method: Composition-based stats. Identities = 48/125 (38%), Positives = 73/125 (58%), Gaps = 1/125 (0%) Query: 6 CHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRASVN 65 C G M I+D+ G + GI G++C C+E +S A A+V + Sbjct: 3 CETGSMTEDIRDVVVELDGLSRTVPGIRGMFCDTCKEIEFCDGDSAARYAEVMDALIAER 62 Query: 66 AETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPE 125 +A E + +RKKL LTQ++AS IFGGG+NAFSRYE+G +P + + LL V+++HPE Sbjct: 63 KTALALE-VRNLRKKLKLTQRQASMIFGGGINAFSRYERGVTEPSRAVMTLLHVMERHPE 121 Query: 126 LLNEI 130 + +E+ Sbjct: 122 IRDEL 126 >UniRef50_A7BYA6 Transcriptional regulator protein n=1 Tax=Beggiatoa sp. PS RepID=A7BYA6_9GAMM Length = 179 Score = 107 bits (266), Expect = 1e-22, Method: Composition-based stats. Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 2/129 (1%) Query: 2 KCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 C +C + +++G + + + C C ++K++ A+++ + Sbjct: 3 NCKLCKSDNISQFNDQEIISYKGTELSV-SMEYSICNRCGREFISKQQIINNDARMRDAK 61 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 S++ + E I RKKL LTQ++AS++FGGG NAFS+YE+ + KL+R+ Sbjct: 62 RSLDGLMTSSE-IYDARKKLGLTQEQASKVFGGGKNAFSKYERSEVSQSVAMDKLIRICL 120 Query: 122 KHPELLNEI 130 KHP + E+ Sbjct: 121 KHPNVFREM 129 >UniRef50_C5V7T9 Putative uncharacterized protein n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V7T9_9PROT Length = 188 Score = 106 bits (265), Expect = 2e-22, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 2/128 (1%) Query: 3 CPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRA 62 C +C +G + + ++ P ++G L ++ C C + + + AF+ Sbjct: 8 CQICGEGHLSALVEINPVEYKGVSKEL-DMYCSICSVCGSEQASANDVRTNKRAMMAFKK 66 Query: 63 SVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 V+ + + +R K + Q AS IFGGG AFS+YE + + KLLR+ D Sbjct: 67 EVDGLLTGVQ-VRALRDKFGINQTYASLIFGGGPVAFSKYESDDVAQSEAMDKLLRLADA 125 Query: 123 HPELLNEI 130 P + Sbjct: 126 VPAAYAHL 133 >UniRef50_C3K4N6 Putative uncharacterized protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K4N6_PSEFS Length = 163 Score = 105 bits (263), Expect = 3e-22, Method: Composition-based stats. Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 3/132 (2%) Query: 3 CPVCH--QGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAF 60 C +C +G + + +G + + G C C + + + Sbjct: 6 CYICGAPRGLTYFEGRSETISIKGMDRRVDELSGWECKVCGDGFWDPDNDSTDRYDAAKD 65 Query: 61 RASVNAETVAPEFIVKVRKKLSLTQKEASEIF-GGGVNAFSRYEKGNAQPHPSTIKLLRV 119 ++ A + + + R+KL LTQKEA E+ GGG NAFSRYE+G + L+R+ Sbjct: 66 ALTLAARKMIGTEMKRTRRKLHLTQKEAVELLSGGGHNAFSRYERGELLAPKPLVLLMRL 125 Query: 120 LDKHPELLNEIR 131 LD+HP LL + + Sbjct: 126 LDRHPHLLADAK 137 >UniRef50_C9KLV8 Toxin-antitoxin system, antitoxin component, Xre family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KLV8_9FIRM Length = 134 Score = 105 bits (263), Expect = 4e-22, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 2/122 (1%) Query: 9 GEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRASVNAET 68 E+V ++ + ++ G + + G Y +E ++ + + +A Sbjct: 14 EELVRDVRPMTISYAGHQMTF-SMPGWYPKDNDEGTFTDDDMKVYDKALNQLKAESEHLL 72 Query: 69 VAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLN 128 E I +RKKL LTQ +A I GGG AF +YE P + LLRVL P LL Sbjct: 73 KPME-IRAIRKKLKLTQVQAGTILGGGKKAFQKYESDEILPSRAISNLLRVLAVQPSLLQ 131 Query: 129 EI 130 I Sbjct: 132 TI 133 >UniRef50_C9P136 Putative uncharacterized protein n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P136_VIBME Length = 178 Score = 105 bits (261), Expect = 7e-22, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 60/128 (46%), Gaps = 2/128 (1%) Query: 3 CPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRA 62 CP+C QG + + + I G++ + C C E + + AF+ Sbjct: 6 CPICEQGRLSNQEEIIHVEHMGQQGSISSQFST-CDVCGSEQATPENARFNKRAMIAFKK 64 Query: 63 SVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 V E + ++RK + +Q++A++IFGGG AFS+YE + + +L+R+ Sbjct: 65 QVQGLLTGME-VRELRKDWNFSQEDAAKIFGGGPVAFSKYESDDVMQSEAMDRLIRIARD 123 Query: 123 HPELLNEI 130 P L+++ Sbjct: 124 VPASLDKL 131 >UniRef50_Q0A690 Putative uncharacterized protein n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A690_ALHEH Length = 204 Score = 104 bits (260), Expect = 7e-22, Method: Composition-based stats. Identities = 35/128 (27%), Positives = 54/128 (42%), Gaps = 2/128 (1%) Query: 3 CPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRA 62 CP C +G + G + +H C C + E+ A + AFR Sbjct: 12 CPACGEGRLEPRQTTQRAEHAGLSEAIP-LHYAVCDTCGSELAEAPEAKANKRAMTAFRK 70 Query: 63 SVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 + + + + RK L LTQ +A+++FGGG AFSRYE + + L+RV Sbjct: 71 RADGLLTGAQ-MRQARKALGLTQAQAAKLFGGGQVAFSRYENDDITQSEAMDSLVRVCLA 129 Query: 123 HPELLNEI 130 P L + Sbjct: 130 QPANLTLL 137 >UniRef50_D0SHI7 Transcriptional regulator n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SHI7_ACIJO Length = 193 Score = 103 bits (258), Expect = 1e-21, Method: Composition-based stats. Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 2/129 (1%) Query: 2 KCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 C +C +G ++ F+G+ + H L C C ++ E + Sbjct: 5 TCVMCDEGLLIKKTVIDNVDFKGQVLKVPNTH-LECNLCGCIELDNEYMKVNNRALN-IE 62 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 + I ++R+ L L+Q EAS IFGGG AFS+YE + S L+ + Sbjct: 63 KKKALDLFTGSEIKEIREGLRLSQTEASAIFGGGKVAFSKYENDDVIQSKSMNTLIGAAN 122 Query: 122 KHPELLNEI 130 + P+LL + Sbjct: 123 RIPDLLPYL 131 >UniRef50_A4E6W9 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6W9_9ACTN Length = 167 Score = 103 bits (258), Expect = 1e-21, Method: Composition-based stats. Identities = 31/125 (24%), Positives = 51/125 (40%), Gaps = 3/125 (2%) Query: 6 CHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRASVN 65 C + EM + +RG K +KGI C C M E+ + + A + Sbjct: 3 CGK-EMQFTTAPMTEIYRGEKITVKGIEHYVC-ECGNDEMTTTEATKLAHALASQYAKAH 60 Query: 66 AETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPE 125 +P I +R L LTQ E + G SR+E G +Q + L++++ PE Sbjct: 61 ELL-SPSDIKDLRSDLGLTQHEFESLLGVSKPTASRWENGASQQSITANNLMKLIRDVPE 119 Query: 126 LLNEI 130 + + Sbjct: 120 VRTYL 124 >UniRef50_C3JZL6 Putative uncharacterized protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3JZL6_PSEFS Length = 260 Score = 103 bits (256), Expect = 2e-21, Method: Composition-based stats. Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 2/125 (1%) Query: 2 KCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 CP+C +G + + P G K + C C + + + + AF Sbjct: 17 TCPICGEGGLHETAHNRPVEIDGHKGFVYS-RSSECDVCGCVQASPTQLRDNLRAMTAFE 75 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 + + + R KL LTQ EA++IFGGG N+F++YE + + L+R+ Sbjct: 76 KEAAGRLTGKQ-MREARTKLGLTQVEAAKIFGGGKNSFAKYEADDVTQSEAMDNLVRLAI 134 Query: 122 KHPEL 126 + P Sbjct: 135 EVPAA 139 >UniRef50_A0LH57 Transcriptional regulator, XRE family n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LH57_SYNFM Length = 167 Score = 102 bits (254), Expect = 4e-21, Method: Composition-based stats. Identities = 33/133 (24%), Positives = 53/133 (39%), Gaps = 6/133 (4%) Query: 2 KCPVCHQGEMVSGIKDIPYTFRG-RKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAF 60 CP C E++ + G L C C E I++ S M + A Sbjct: 11 TCPTCGSTEIIFKRGHHHFLESGLENIHLSNADIWRCNACGEEIVSIPRSMELMKSI-AE 69 Query: 61 RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVL 120 + +++ I RK L + KE S++ G SR+E G+ +P S +L+R+ Sbjct: 70 SILLKPISLSGAEIRFFRKNLGMKIKEFSQLLGVDRVTVSRWENGHEKPSKSADRLIRLT 129 Query: 121 ----DKHPELLNE 129 K PE + E Sbjct: 130 YAVEAKVPEAVME 142 >UniRef50_Q4KHV0 Putative uncharacterized protein n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KHV0_PSEF5 Length = 160 Score = 97.8 bits (242), Expect = 8e-20, Method: Composition-based stats. Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 5/132 (3%) Query: 2 KCPVCH--QGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKA 59 +C C G + + +R + L G+ G C C E + ++ + A Sbjct: 5 QCYSCGAPTGMLAFEQRSELIDYRHLQRHLHGLAGWECQECGEIEFDAASAERYAAAGDQ 64 Query: 60 FRASVNAETVAPEFIVKVRKKLSLTQKEASEIF-GGGVNAFSRYEKGNAQPHPSTIKLLR 118 + + + ++R+KL L+QKEA + GGG NAFSRYE+G L+R Sbjct: 65 L--LEDYRQIVAADMKRIRRKLHLSQKEAVRLLSGGGHNAFSRYERGEVGAPQPLYMLMR 122 Query: 119 VLDKHPELLNEI 130 +LD+HP+L+ ++ Sbjct: 123 LLDRHPQLMKDV 134 >UniRef50_Q58KB7 ORF170 n=2 Tax=Bacteria RepID=Q58KB7_9BACT Length = 170 Score = 97.8 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 42/119 (35%), Positives = 63/119 (52%) Query: 1 MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAF 60 MKCP C E++ +D+P ++G T++ + G +C CEE I+N+E + + F Sbjct: 1 MKCPCCGAAELIHDTRDMPTLYKGENTMIPAVTGDFCPACEEVILNREHGARYSELIGQF 60 Query: 61 RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRV 119 VNA V P +I KVRKKL L Q++A+E FGG + S + P + L V Sbjct: 61 HRQVNAAYVDPGYIAKVRKKLDLDQRQAAEDFGGLASMPSHATRTARPSRPCCSRCLNV 119 >UniRef50_A4XM96 Helix-turn-helix domain protein n=2 Tax=Clostridia RepID=A4XM96_CALS8 Length = 341 Score = 96.3 bits (238), Expect = 3e-19, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 57/118 (48%), Gaps = 3/118 (2%) Query: 3 CPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRA 62 CP C + + K++ ++G + ++ H +C C+ ++ + + + ++ Sbjct: 7 CPECKKHVEIKVEKNLVKEYKGVQVNVEE-HAPHCSECDTELLVPDIENENLKRLYQRYR 65 Query: 63 SVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVL 120 + PE I K+R+K L+Q+E +I G G +RYE+G P S +L+++ Sbjct: 66 ELTGLI-TPEEIQKIREKYGLSQRELGQILGWGKMTINRYERGAL-PSKSHSDILKLI 121 >UniRef50_B2AJ70 Putative uncharacterized protein n=1 Tax=Cupriavidus taiwanensis RepID=B2AJ70_CUPTR Length = 252 Score = 94.3 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 30/128 (23%), Positives = 50/128 (39%), Gaps = 2/128 (1%) Query: 3 CPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRA 62 C VC +G + S +G + + +C C + + V R Sbjct: 7 CDVCGEGHVASVYGQNEIEHKGATFSVPFVMS-HCEECGSDYASASDMRQNKRAVVELRK 65 Query: 63 SVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 + + + +R L + +A +IFGGG AFS+YE + S KL+RV + Sbjct: 66 KLECLL-TGQEVHAIRVGAGLKKVQAVKIFGGGPVAFSKYEADDVTQSASMDKLIRVAAQ 124 Query: 123 HPELLNEI 130 P L + Sbjct: 125 VPTALAWL 132 >UniRef50_D2C8D5 Transcriptional regulator, XRE family n=1 Tax=Thermotoga naphthophila RKU-10 RepID=D2C8D5_THENR Length = 330 Score = 92.0 bits (227), Expect = 5e-18, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 53/129 (41%), Gaps = 5/129 (3%) Query: 3 CPVCHQ-GEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 C C++ + +K+ Y RG + +K C C + + D + + Sbjct: 13 CENCNKFVDYEVILKEDIYNVRGEEIKIKAKI-PVCKVCGGELFDIHLEDENLREAYRMY 71 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 A + + PE I +R+ L+Q+ + I G G +RYE G + P + L++ Sbjct: 72 AKKHGLVL-PEEIKNIRENYGLSQETFARILGIGRATLARYENG-SLPSEAISSLIK-RS 128 Query: 122 KHPELLNEI 130 K P L + Sbjct: 129 KDPNFLLSL 137 >UniRef50_D2QQQ8 Transcriptional regulator, XRE family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QQQ8_9SPHI Length = 333 Score = 91.6 bits (226), Expect = 6e-18, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 50/130 (38%), Gaps = 5/130 (3%) Query: 1 MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAF 60 M P+ M + FR + H C E ++ QV Sbjct: 1 MNSPLTGS-PMELRTRPETRFFRREPFQIVH-HFYLCEETGEEFTDEHTDSVNQKQVLNQ 58 Query: 61 RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVL 120 V P+ I +R K L+ + +E+ G GVN++ +YE G P S +L+++ Sbjct: 59 YR-VAHNLPFPDEIAAIRTKYGLSASKMAEVLGFGVNSYRQYETGEI-PSDSNARLIQLA 116 Query: 121 DKHPELLNEI 130 K PE ++ Sbjct: 117 -KDPEEFKKL 125 >UniRef50_C6LB00 Toxin-antitoxin system, antitoxin component, Xre family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LB00_9FIRM Length = 326 Score = 90.1 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 52/124 (41%), Gaps = 3/124 (2%) Query: 7 HQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRASVNA 66 + E+ + + + F+ K LYC EE M++++ ++K Sbjct: 2 EEHEVKTVLAEEQAVFKDVKIDYDAY-YLYCDAAEELYMDEQQMKDNDVRLKDAYRKKEG 60 Query: 67 ETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPEL 126 + E I +R+K ++Q++ S + G G +RYE Q + +LR L + PE Sbjct: 61 LLTSSE-ISGIREKYGISQRDLSTLLGWGGKTITRYESHQVQ-DRAHDTILRKLAQDPEW 118 Query: 127 LNEI 130 + Sbjct: 119 FLAL 122 >UniRef50_C6VTF5 Helix-turn-helix domain-containing protein n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VTF5_DYAFD Length = 328 Score = 88.9 bits (219), Expect = 4e-17, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 51/127 (40%), Gaps = 5/127 (3%) Query: 1 MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAF 60 MK P+ + ++ FR + + H C E + + + QV Sbjct: 1 MKSPITGKEMLLRHEAS-KVAFRKEEFSIVS-HYYECGDSGERFTDDRLDELSIVQVHNQ 58 Query: 61 RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVL 120 P+ I ++R++ ++ + SEI G G N++ YE G P + +L+ + Sbjct: 59 YREKYG-IPFPDEIRRIRERYGISASKMSEILGLGANSYRLYESGEV-PSVAIGRLIMSI 116 Query: 121 DKHPELL 127 ++PE Sbjct: 117 -RNPETF 122 >UniRef50_A1BCL4 Helix-turn-helix domain protein n=2 Tax=Chlorobium/Pelodictyon group RepID=A1BCL4_CHLPD Length = 335 Score = 88.9 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 27/131 (20%), Positives = 53/131 (40%), Gaps = 7/131 (5%) Query: 1 MKCPVCH-QGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKA 59 MK P+ + ++ + + + + H +C ++ + E + + QV Sbjct: 1 MKSPMSGREMTLIKEARTMIFRKKEYPVCY---HVYHCNDTQQQFTSTELDEINLVQVYN 57 Query: 60 FRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRV 119 PE I +R+ L+ + +E+ G G N + YE+G P S +L++V Sbjct: 58 QYRD-EHNLPFPEEIRSIREAYGLSAAKMAEVLGLGTNTYRNYEQGEV-PSESNARLIQV 115 Query: 120 LDKHPELLNEI 130 PE +I Sbjct: 116 AQD-PEEFRKI 125 >UniRef50_C0XBS2 Phage associated protein n=1 Tax=Lactobacillus gasseri JV-V03 RepID=C0XBS2_9LACO Length = 131 Score = 88.6 bits (218), Expect = 5e-17, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 47/117 (40%), Gaps = 3/117 (2%) Query: 14 GIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRASVNAETVAPEF 73 + +G++ + + + I + E D + + P Sbjct: 6 KNYTNTFDIKGKEITVTD-PARFEKNTYRLINDNEFDDQAVEIAQEIYRQKYGFV-GPAD 63 Query: 74 IVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEI 130 I K+RKK L+Q++ + + G + + YE G P +LL VL K+P+++ + Sbjct: 64 IKKLRKKWKLSQRQLASVLGWSPSTIALYEVGEI-PTVGNNRLLNVLIKNPQVMKDF 119 >UniRef50_C8PU52 Transcriptional regulator, XRE family n=2 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PU52_9GAMM Length = 110 Score = 88.6 bits (218), Expect = 6e-17, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 40/85 (47%) Query: 46 NKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKG 105 + + + K+ + +VR+K L+Q + ++ G VN +E+G Sbjct: 22 DPDAIVIKDSLAKSLSQLREGRYAPVSEVSQVRQKTGLSQSQFAKSLGISVNTLKSWEQG 81 Query: 106 NAQPHPSTIKLLRVLDKHPELLNEI 130 +P S LL++L K PEL++EI Sbjct: 82 QRKPSGSAQVLLKLLGKKPELIDEI 106 >UniRef50_A4J0H7 Putative uncharacterized protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J0H7_DESRM Length = 334 Score = 88.6 bits (218), Expect = 6e-17, Method: Composition-based stats. Identities = 29/117 (24%), Positives = 54/117 (46%), Gaps = 4/117 (3%) Query: 3 CPVCHQGEMVSGIKDIPYTFRGRKTVLK-GIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 C C + E++ K+ + + R V K L+C C + ++E +A Sbjct: 6 CGNCEK-EVLGITKEDYFEYPVRNLVYKINGKRLFCPDCGNELFHREYDEANQRAAFDLY 64 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLR 118 ++P+ I +R+K LTQ+E S + G G SRYE+G + P + ++++ Sbjct: 65 RK-ETGIISPKEIKDIREKYELTQREFSYLLGFGEITVSRYERG-SLPTIAQSQIIK 119 >UniRef50_Q1N9W5 Transcriptional regulator, XRE family protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N9W5_9SPHN Length = 137 Score = 88.6 bits (218), Expect = 6e-17, Method: Composition-based stats. Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 9/129 (6%) Query: 4 PVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRAS 63 P + + ++ F + + G Y +SI + E+ + +A+ Sbjct: 8 PETGK-TLRRDVRKQVVAFGSLSRAV-DVPGWYPDDESDSIHSGEDLAESDRAFRDLKAA 65 Query: 64 VNAETVAPEFIVKVRK-KLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 A + ++RK KL LTQ+EA + GGG AF +YE G+ P + + L+ +LD+ Sbjct: 66 YGAH------VRRIRKDKLKLTQEEAGRLIGGGRRAFQKYESGSTPPSDAAVGLIELLDR 119 Query: 123 HPELLNEIR 131 HPE + +R Sbjct: 120 HPEEVEFLR 128 >UniRef50_C5CDA8 Transcriptional regulator, XRE family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CDA8_KOSOT Length = 331 Score = 88.2 bits (217), Expect = 8e-17, Method: Composition-based stats. Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 6/123 (4%) Query: 1 MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAF 60 MKCP C + E+ +F+GR+ L + C CE+S ++ + +V Sbjct: 1 MKCPKCGR-ELYKKQIREKQSFKGREVEL-SYNVFVCPQCEDSFVDSASLEQAWKKVWDD 58 Query: 61 RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVL 120 N +PE + + R KL LT +E S+I G + S+ E G+ + S LL++ Sbjct: 59 YEKEN-HIPSPETLREARMKLKLTAEELSKIIGRTKSLISKLENGSRRLSES---LLKIY 114 Query: 121 DKH 123 + H Sbjct: 115 ENH 117 >UniRef50_A6TLM4 Putative uncharacterized protein n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TLM4_ALKMQ Length = 338 Score = 87.8 bits (216), Expect = 9e-17, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 54/129 (41%), Gaps = 4/129 (3%) Query: 3 CPVCHQGEMVSGIK-DIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 C +C + V ++ T++ ++ YC + +E + +E A +K Sbjct: 11 CLMCMEEHGVDTVEVIDEETYKSKEVSFNA-TYEYCANADEYLETEEMIKANSLMMKDAY 69 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 + + I+ +R K L+QK+ SEI G +RYE Q + +LR ++ Sbjct: 70 RKKVGLLTS-DEIINIRAKYGLSQKDFSEILDWGKATITRYENHQVQ-DRAHDDVLRKIN 127 Query: 122 KHPELLNEI 130 P+ E+ Sbjct: 128 SDPKWFLEM 136 >UniRef50_A5G3N3 Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G3N3_GEOUR Length = 295 Score = 87.8 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 27/131 (20%), Positives = 50/131 (38%), Gaps = 2/131 (1%) Query: 1 MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAF 60 M C C + E + ++ T VL + C C E +S + A Sbjct: 1 MICTNCFEAEYRAAKTELTITVNDESHVLHDLDCEICPACGEVTFTHAQSLEIDKKRIAM 60 Query: 61 RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLL-RV 119 + PE + +R+ L + E ++ G N + R+E+G PS L+ + Sbjct: 61 EFGLKPLL-TPEQLKTLRRVLDMKLDEICDLLQIGRNTYGRWERGEVAITPSMNLLVHNL 119 Query: 120 LDKHPELLNEI 130 ++K P+ + Sbjct: 120 IEKVPDARVNL 130 >UniRef50_C8W2H4 Putative phage-associated protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W2H4_DESAS Length = 339 Score = 85.5 bits (210), Expect = 5e-16, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 49/129 (37%), Gaps = 4/129 (3%) Query: 3 CPVCHQG-EMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 C C + + K I +G + C C E+I E D + + Sbjct: 7 CYYCDENVSFIIQEKIITENIKGIEFDYVANIAY-CKECGEAIYIAELDDENVKRANKKY 65 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 ++ + + I + K ++ QK +++ G G +RY +G + +L +L+ Sbjct: 66 RQLH-DIIQVNEIEEFLNKYNIGQKPLAKLLGWGETTITRYLQGLTPSREYSDRLRELLN 124 Query: 122 KHPELLNEI 130 P + E+ Sbjct: 125 D-PVKMREL 132 >UniRef50_A1VJ81 Helix-turn-helix domain protein n=11 Tax=Proteobacteria RepID=A1VJ81_POLNA Length = 201 Score = 85.1 bits (209), Expect = 7e-16, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 6/88 (6%) Query: 47 KEESDAFMAQVKAFRASVNAETVAPEFIVKV------RKKLSLTQKEASEIFGGGVNAFS 100 E + F + A + A A +V + R K+ ++Q E + + G V Sbjct: 111 DAEMEQFQNDLLASVRQMKAGKAARTTVVALTPAADARAKVGMSQSEFAALLGVSVRTLQ 170 Query: 101 RYEKGNAQPHPSTIKLLRVLDKHPELLN 128 +E+G +P + LLR+ + PE + Sbjct: 171 DWEQGRREPSGAAKTLLRIAARTPEAVR 198 >UniRef50_Q2L0I8 Putative DNA-binding protein n=2 Tax=Proteobacteria RepID=Q2L0I8_BORA1 Length = 79 Score = 84.7 bits (208), Expect = 9e-16, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 33/69 (47%) Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 A++ A I + R ++ L Q E +++ G V +E+G P + LLRV Sbjct: 4 AALPARRWPASRISEARNRVGLPQAEFADLLGVSVRTLQDWEQGRRNPSGAAQTLLRVAI 63 Query: 122 KHPELLNEI 130 HPE L ++ Sbjct: 64 LHPETLRDL 72 >UniRef50_A6W266 Helix-turn-helix domain protein n=2 Tax=Gammaproteobacteria RepID=A6W266_MARMS Length = 96 Score = 84.3 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 28/79 (35%) Query: 48 EESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNA 107 E +K + A + +R K L+Q + + G +E+G Sbjct: 11 ESVQQADNIIKGQATATRITEFADPEVKAIRTKTGLSQSRFANLLGVSKRTLENWEQGRR 70 Query: 108 QPHPSTIKLLRVLDKHPEL 126 P LL+++D PE Sbjct: 71 HPTGPARALLKIVDADPEY 89 >UniRef50_B8G1P7 Helix-turn-helix domain-containing protein n=2 Tax=Desulfitobacterium hafniense RepID=B8G1P7_DESHD Length = 332 Score = 84.3 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 26/129 (20%), Positives = 49/129 (37%), Gaps = 5/129 (3%) Query: 3 CPVCH-QGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 C +C + E K ++ RG + C C + ++E + +V Sbjct: 5 CDICQCEQETQVDNKRETFSVRGEEIETVS-DIRICSICRNELFDEELDTKNLERVYQAY 63 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 + + +P I ++R+ + + + + + G F RYE G +LLR L Sbjct: 64 RNKHNLL-SPFEIKQIRESIG-SGRTVASLLGWSQATFVRYEGGAIPSASHHEQLLR-LK 120 Query: 122 KHPELLNEI 130 P LN + Sbjct: 121 NDPTYLNYL 129 >UniRef50_UPI0001AF457D hypothetical protein Psyrpo1_28742 n=1 Tax=Pseudomonas syringae pv. oryzae str. 1_6 RepID=UPI0001AF457D Length = 239 Score = 84.3 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 30/136 (22%), Positives = 52/136 (38%), Gaps = 8/136 (5%) Query: 2 KCPVCHQGEMVSGIKDIPYTFR--GRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKA 59 +CP+C + +K I G L + C C E + E A + Sbjct: 4 QCPICASLNALQRVKYIFIARPMPGHSVEL-ELPAFECCVCGEQVETPELVVQNSAMISE 62 Query: 60 FRASVNAETVAPEF-----IVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTI 114 + + A+ + + + ++R ++QKE S + G N+ S+YE + P Sbjct: 63 AKLAWLADHESSDRAIGYLVKELRNNFGVSQKEFSIMTGATGNSISKYESHSIVPSALAR 122 Query: 115 KLLRVLDKHPELLNEI 130 KL VL K E + Sbjct: 123 KLFTVLAKSKESRQIL 138 >UniRef50_UPI0000382ADF COG2944: Predicted transcriptional regulator n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000382ADF Length = 198 Score = 83.9 bits (206), Expect = 1e-15, Method: Composition-based stats. Identities = 20/122 (16%), Positives = 38/122 (31%), Gaps = 2/122 (1%) Query: 3 CPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRA 62 C C + ++ G+K + + C C + A Sbjct: 6 CQACEGISVSERVEPFVVERSGKKVTFEDRR-MVCAACGNVSYRGSQISQHEFAHAAAVR 64 Query: 63 SVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 + + E + +R K L Q + I G ++R+E+G + +R L Sbjct: 65 ELEGLL-SAEELCAIRLKYKLRQTDMELILSTGPKTWTRWERGKVPQSKVADRYIRALAS 123 Query: 123 HP 124 P Sbjct: 124 DP 125 >UniRef50_C2D085 Transcriptional regulator phage-related n=1 Tax=Lactobacillus brevis subsp. gravesensis ATCC 27305 RepID=C2D085_LACBR Length = 114 Score = 83.5 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 49/113 (43%), Gaps = 3/113 (2%) Query: 9 GEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRASVNAET 68 +M + D YT RG K ++ + + + +++ D + + V + Sbjct: 5 EKMDVKLIDEVYTIRGEKIAIRS-SARFDSQTNKQVFDEKLDDQAVNEAFDAYR-VKHDV 62 Query: 69 VAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 ++P+ I +R K L Q++ + + G + YE G P S ++L+ L+ Sbjct: 63 ISPDRIKALRHKYGLNQRDFATLLGWSPTTIATYETGAL-PSKSNDRILKSLE 114 >UniRef50_B5EAM0 Putative uncharacterized protein n=1 Tax=Geobacter bemidjiensis Bem RepID=B5EAM0_GEOBB Length = 159 Score = 83.5 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 46/119 (38%), Gaps = 2/119 (1%) Query: 1 MKCPVCHQGEMVSGIKDIPYTFRG-RKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKA 59 M+CP C + E++ +++ Y G L GI C C + + + Sbjct: 1 MRCPTCDRSELIESVENYHYRECGLENITLSGITVRKCPECGVVMPKIRNIEGLHDCIAK 60 Query: 60 FRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLR 118 F +APE IV +RK L + + ++ S++E G + S L R Sbjct: 61 FLVKKEERLLAPE-IVFLRKSLGWSSSDLAKNLQIDKTQVSKWEHGRVEMSKSNELLFR 118 >UniRef50_C2CWL5 Prophage ps3 protein 01 n=1 Tax=Gardnerella vaginalis ATCC 14019 RepID=C2CWL5_GARVA Length = 369 Score = 83.2 bits (204), Expect = 2e-15, Method: Composition-based stats. Identities = 25/129 (19%), Positives = 52/129 (40%), Gaps = 4/129 (3%) Query: 3 CPVCHQG-EMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 C C E + + + +G++ G +C C ++ E DA + + Sbjct: 8 CEECRNNVEYSTKSVPMTASIKGKQYSYTGTEA-HCKECGSAVYVPEIIDANLRALYDEY 66 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 N + + I ++ K S+ ++ S + G G FSR+ G+ + LLR+ + Sbjct: 67 RKEN-NIIPLDKINEIPAKYSIGKRPLSLLLGWGEQTFSRFADGDIPSKQYSDILLRIYN 125 Query: 122 KHPELLNEI 130 P+ ++ Sbjct: 126 D-PKYYLQL 133 >UniRef50_Q1DFX0 Conserved domain protein n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1DFX0_MYXXD Length = 168 Score = 83.2 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 45/121 (37%), Gaps = 2/121 (1%) Query: 1 MKCPVCHQGEMVSGIKDIPYTFRG-RKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKA 59 MKC C + + + + G +L G+ C C E + + Sbjct: 1 MKCESCGGELLETRLDSYHFDESGLEDVILVGVIERRCEKCNEREVVIPRLKELHRTIAK 60 Query: 60 FRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRV 119 A+ N+ E + +RK L +Q + ++ A SR+E G + LLR+ Sbjct: 61 ALAAKNSLLTPLE-VRFLRKHLGFSQADFAKRINVRSEAVSRWETGAEEFSWHFELLLRL 119 Query: 120 L 120 + Sbjct: 120 M 120 >UniRef50_C2HQE2 Phage-like transcriptional regulator protein n=5 Tax=Lactobacillus RepID=C2HQE2_LACAC Length = 136 Score = 83.2 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 49/114 (42%), Gaps = 3/114 (2%) Query: 17 DIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVK 76 Y RG + + + E I + E D + + + V+PE + Sbjct: 17 TNTYDIRGHEIEITA-PARFDDRTHEVIPDLELDDQAVKLALEKFRKIY-DVVSPEQMKA 74 Query: 77 VRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEI 130 +RKK L+Q++ +++ G + + YE G P +LL++L K +++ E Sbjct: 75 LRKKWHLSQRKFAKVLGWSSSTVALYEAGAV-PTNGNNRLLKILIKDDKVMKEF 127 >UniRef50_A7HHQ8 Helix-turn-helix domain protein n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HHQ8_ANADF Length = 157 Score = 82.8 bits (203), Expect = 3e-15, Method: Composition-based stats. Identities = 19/113 (16%), Positives = 37/113 (32%), Gaps = 3/113 (2%) Query: 2 KCPVCHQGEMVSGIKDIPYTFRGRKTVLK-GIHGLYCVHCEESIMNKEESDAFMAQVKAF 60 +C C + + + + C C E ++ + F + A Sbjct: 7 RCSRCGDTTLRDETETLSVKLPRSDVTASVAVPARRCPACGEVHLDGTLAQRFQ--LAAC 64 Query: 61 RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPST 113 +A E + +RK L L E + + S +E G A+P+ + Sbjct: 65 SELADAGVDTGEALRHMRKVLGLRAAELARLLDVTPETISHWETGKARPNRAA 117 >UniRef50_Q2RXN6 Transcriptional regulator, XRE family n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RXN6_RHORT Length = 96 Score = 82.0 bits (201), Expect = 6e-15, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 40/86 (46%) Query: 44 IMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYE 103 ++ ++ A+ +T A + +R+ L L+Q E + FG ++ +E Sbjct: 7 LIGMRQAVAYARGEAVGVRETTVKTPASVDVKAIREGLGLSQSEFARQFGFSTSSIRNWE 66 Query: 104 KGNAQPHPSTIKLLRVLDKHPELLNE 129 +G+ P LL+V++ PE++ + Sbjct: 67 QGHRYPEGPARVLLKVIEIDPEVVRK 92 >UniRef50_C3QME8 Helix-turn-helix domain-containing protein n=2 Tax=Bacteroides RepID=C3QME8_9BACE Length = 331 Score = 81.2 bits (199), Expect = 8e-15, Method: Composition-based stats. Identities = 33/130 (25%), Positives = 48/130 (36%), Gaps = 5/130 (3%) Query: 1 MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAF 60 MK P + K + FR + H C E E M QV Sbjct: 1 MKSPFTGGDAALCHEK-QSFEFRKDNFEIV-YHFYRCKDTNEEFTTTELDQLNMNQVYNL 58 Query: 61 RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVL 120 A P+ I +VR+ ++ S++ G G N + +YE+G P S K++ L Sbjct: 59 YRQKYA-IPFPDEIKRVRELYGISALRMSKLLGFGDNQYRKYEEGET-PSVSNGKMISAL 116 Query: 121 DKHPELLNEI 130 K P EI Sbjct: 117 -KDPHFFLEI 125 >UniRef50_A1U7F0 Virulence gene repressor RsaL n=4 Tax=Proteobacteria RepID=A1U7F0_MARAV Length = 95 Score = 81.2 bits (199), Expect = 9e-15, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 4/91 (4%) Query: 41 EESIMNK-EESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAF 99 I++ E A R ++ P +R KL+++Q + + G V Sbjct: 7 GAEILDGINEIKQLKKGKLALRTHELSDPSPP---KVIRLKLNMSQSAFAGLMGVSVRTL 63 Query: 100 SRYEKGNAQPHPSTIKLLRVLDKHPELLNEI 130 +E+G +P + LLR+ ++HPE+ NE+ Sbjct: 64 QDWEQGRREPQGPAVALLRIAEQHPEVFNEL 94 >UniRef50_C6Q836 Transcriptional regulator, XRE family n=1 Tax=Thermoanaerobacter mathranii subsp. mathranii str. A3 RepID=C6Q836_9THEO Length = 194 Score = 80.8 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 5/129 (3%) Query: 3 CPVCHQGEMVSGIKDIPY-TFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 CPVC + + I+ T RG + C C E + ++E + + +V Sbjct: 5 CPVCGKEQETKVIEKEEISTVRGDEIKALAKI-RVCSVCGEELFDEELEEENIQRVYDIY 63 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 + ++P+ I +R+ L+Q+ +++ G G + +RYE G P S ++ +L Sbjct: 64 RKKHG-ILSPDEIRNIRESYRLSQRAFAKLLGIGEASIARYETGAL-PEKSLSNMIMLL- 120 Query: 122 KHPELLNEI 130 K PE + ++ Sbjct: 121 KDPENMEKL 129 >UniRef50_D2BLB0 Phage protein, transcriptional regulator, Cro/CI family n=4 Tax=root RepID=D2BLB0_LACLK Length = 306 Score = 80.5 bits (197), Expect = 1e-14, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 42/111 (37%), Gaps = 2/111 (1%) Query: 12 VSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRASVNAETVAP 71 + +T RG + + L+ E + ++E D + + Sbjct: 4 IKKDYKQIFTIRGEEFEVTA-PALFDDSTNELLYDEELDDKAIEMANDLYREAHGFVYPS 62 Query: 72 EFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 E I K R+KLS++ ++ + + G YE G ++ KL +++ Sbjct: 63 E-IKKFREKLSISGRDLAALIGFSPTTIVMYENGALPTESNSRKLKDLINN 112 >UniRef50_Q5P4X5 DNA-binding protein n=8 Tax=Proteobacteria RepID=Q5P4X5_AZOSE Length = 95 Score = 80.1 bits (196), Expect = 2e-14, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 36/92 (39%), Gaps = 6/92 (6%) Query: 38 VHCEESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVN 97 + +M + A + +R K+ +TQ++ + FG Sbjct: 6 DSIKRGLMEAIDHAEGRAPATRVHRPRPV------DVKALRAKVGMTQEQFAARFGFSTA 59 Query: 98 AFSRYEKGNAQPHPSTIKLLRVLDKHPELLNE 129 +E+G+ PH + LL V+D++P + E Sbjct: 60 TLRHWERGDRTPHGPALVLLNVIDRNPAAVIE 91 >UniRef50_Q2RPT5 Transcriptional regulator, XRE family n=3 Tax=Alphaproteobacteria RepID=Q2RPT5_RHORT Length = 98 Score = 80.1 bits (196), Expect = 2e-14, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 32/62 (51%) Query: 67 ETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPEL 126 AP + +R KL +TQ++ + FG VN +E+G QP + L V+D+ P+ Sbjct: 31 HIPAPIDVRAIRAKLGMTQEQFAGRFGFSVNTLRHWEQGKRQPEGPSRAYLLVIDRAPDA 90 Query: 127 LN 128 + Sbjct: 91 VQ 92 >UniRef50_B6WV39 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WV39_9DELT Length = 104 Score = 80.1 bits (196), Expect = 2e-14, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 31/76 (40%) Query: 54 MAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPST 113 A + +R+KL L+Q + FG + +E+G QP P+ Sbjct: 24 DRAQYGVHDFPPASAPERVDVKAIRQKLGLSQAVFAAAFGLSLYTLRNWEQGRRQPDPAA 83 Query: 114 IKLLRVLDKHPELLNE 129 LRV++ P+++ Sbjct: 84 RAYLRVIEVAPDVVRR 99 >UniRef50_C2EVP3 Phage associated protein n=10 Tax=Lactobacillus RepID=C2EVP3_9LACO Length = 307 Score = 79.3 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 48/113 (42%), Gaps = 3/113 (2%) Query: 17 DIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVK 76 YT G + + L+ + E I +KE D + +P+ + + Sbjct: 8 TTTYTINGHEYTVTA-PALFDSNTNELIPDKELDDQAAEIARQQYRDEMGLL-SPQELKQ 65 Query: 77 VRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNE 129 R K+ L+Q+ +E+ G N + YE G P + +LL+ L + ++L + Sbjct: 66 YRAKVGLSQRNLAELTGLSPNTIALYEAGAF-PTKANNRLLKSLIANDDVLQQ 117 >UniRef50_A2RP91 Predicted helix-turn-helix containing protein n=4 Tax=Enterobacteriaceae RepID=A2RP91_SALTI Length = 96 Score = 79.3 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 2/91 (2%) Query: 43 SIMNK--EESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFS 100 + + E + +A + A T + +R K L Q E +++ G + Sbjct: 4 ELFDDLIESVNEAVAIKRGLVAPARVTTFEMPDVKAIRTKAKLKQNEFAQVVGVSPSLVQ 63 Query: 101 RYEKGNAQPHPSTIKLLRVLDKHPELLNEIR 131 +E+ P S++KLLRV++KHP++LN R Sbjct: 64 AWEQQKRTPTGSSLKLLRVIEKHPDMLNLFR 94 >UniRef50_B6IPE3 DNA-binding protein, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6IPE3_RHOCS Length = 110 Score = 78.9 bits (193), Expect = 5e-14, Method: Composition-based stats. Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 1/81 (1%) Query: 48 EESDAFMAQVKAF-RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGN 106 E++ A + ++ A+V + +VR++L LTQ+E + FG + +E+ Sbjct: 19 EDAAALVDSLRGLGVAAVRRTAPPAPDVRRVRERLGLTQREFAATFGIELGTLRNWEQNR 78 Query: 107 AQPHPSTIKLLRVLDKHPELL 127 P LLRVL++HPE++ Sbjct: 79 NPPDAPGRLLLRVLERHPEIV 99 >UniRef50_B0KAX5 Transcriptional regulator, XRE family n=5 Tax=Thermoanaerobacter RepID=B0KAX5_THEP3 Length = 193 Score = 78.9 bits (193), Expect = 5e-14, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 57/129 (44%), Gaps = 5/129 (3%) Query: 3 CPVCHQGEMVSGIKDIPYT-FRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 CPVC + I+ + RG + C C E + ++E + + +V Sbjct: 5 CPVCGIEQETEIIEKEEASNVRGDEIKALA-RIRVCSVCGEELFDEELEEGNIKRVYDIY 63 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 + ++ + I +R+ L+Q+ +++ G G + +RYE G P S LL +L Sbjct: 64 REKHG-ILSTKEIRNIRENYGLSQRAFAKLLGIGEASIARYETGAL-PEKSLSNLLMLL- 120 Query: 122 KHPELLNEI 130 K P+ + ++ Sbjct: 121 KDPKNMEKL 129 >UniRef50_C0GQR0 Transcriptional regulator, XRE family n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GQR0_9DELT Length = 272 Score = 78.5 bits (192), Expect = 6e-14, Method: Composition-based stats. Identities = 25/117 (21%), Positives = 37/117 (31%), Gaps = 4/117 (3%) Query: 2 KCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 KCP C M F+G G + C C + + + Sbjct: 5 KCPAC-SSLMEFKELKKKKVFKGLDIEYSG-NFFVCPGCSLEAGDAGSAGEVQRAIADAY 62 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLR 118 + I ++R LTQ++ S GV + R+E G S LLR Sbjct: 63 REKAGLL-TGQEIRELRDSKGLTQEQLSRALNVGVASIKRWESG-MVQSRSMDGLLR 117 >UniRef50_A9BHQ9 Helix-turn-helix domain protein n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BHQ9_PETMO Length = 339 Score = 78.5 bits (192), Expect = 6e-14, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 47/130 (36%), Gaps = 4/130 (3%) Query: 3 CPVCHQGEMVSGIKDIP-YTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 C C + IK Y + + C C ++ + + Sbjct: 13 CEQCGKLVGYKTIKKKENYNVKNYPIEV-ERTVAICEECGAELLEPYYENENLKAAYRKY 71 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 A +N + PE I ++R K +++Q + I G G RYE G + P L++ + Sbjct: 72 AELNNLVL-PEEIKEIRSKYNVSQTLFALILGLGEATIQRYEMG-SLPTKVNSDLIKRVS 129 Query: 122 KHPELLNEIR 131 + E ++ Sbjct: 130 EPIEFYKILK 139 >UniRef50_Q1YRR7 Helix-turn-helix motif protein n=2 Tax=gamma proteobacterium HTCC2207 RepID=Q1YRR7_9GAMM Length = 93 Score = 78.5 bits (192), Expect = 6e-14, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 2/86 (2%) Query: 47 KEESDAFMAQVKAFRASVNAETVAPEF--IVKVRKKLSLTQKEASEIFGGGVNAFSRYEK 104 + A V A + A+ PE ++ VRK+L +Q +++ G V +E+ Sbjct: 6 SDAGQALSDDVLGINAGMPAKIWFPEQLLVIAVRKQLQKSQPGFAKLLGIPVGTLRDWEQ 65 Query: 105 GNAQPHPSTIKLLRVLDKHPELLNEI 130 G QP + + L++V HPE+L + Sbjct: 66 GRKQPDSAAVTLIKVAQSHPEVLANL 91 >UniRef50_B8FKT9 Putative transcriptional regulator, XRE family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FKT9_DESAA Length = 128 Score = 78.2 bits (191), Expect = 8e-14, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 41/121 (33%), Gaps = 3/121 (2%) Query: 3 CPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRA 62 CP C M K+ FRGR+ + + C C E++ A + Sbjct: 8 CPGCG-ASMPLCTKEATIQFRGREITV-EVACHVCPDCGLEAGTPEQACTIQAAIAEAYR 65 Query: 63 SVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 + I + R L+Q+E +E G + +E G Q L ++L Sbjct: 66 FQEG-MMTGREITETRWSKGLSQEELAEKTGFPLREIQCWEAGAIQSREQDDLLRQILTD 124 Query: 123 H 123 Sbjct: 125 E 125 >UniRef50_C1AE28 Xre family DNA binding protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AE28_GEMAT Length = 103 Score = 78.2 bits (191), Expect = 9e-14, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 31/82 (37%) Query: 48 EESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNA 107 E A + R A P + VR L +Q E + + G V +E+G Sbjct: 11 ESVRQAGAIRRGERKPARARQFKPTDVKAVRADLGQSQAEFALMIGVSVATLRNWEQGRR 70 Query: 108 QPHPSTIKLLRVLDKHPELLNE 129 P + LL+V +P + E Sbjct: 71 MPEGPALALLQVAAHNPAAVVE 92 >UniRef50_B0BVA4 Transcriptional repressor n=9 Tax=spotted fever group RepID=B0BVA4_RICRO Length = 142 Score = 77.8 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 37/71 (52%) Query: 60 FRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRV 119 +A+ + ++ + + R KL LTQ++ + FG V +E+G P + LL++ Sbjct: 69 LKANKHDIKLSNIDVHEARDKLKLTQQQFATTFGVSVATLRNWEQGRRLPTGAAKLLLKI 128 Query: 120 LDKHPELLNEI 130 ++K P ++ + Sbjct: 129 IEKEPNVVKRV 139 >UniRef50_C6HUS9 Helix-turn-helix domain protein n=2 Tax=Leptospirillum RepID=C6HUS9_9BACT Length = 102 Score = 77.8 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 31/55 (56%) Query: 75 VKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNE 129 +VR+ L+Q E +EI G V +E+G +P + LL++ +K+P LL E Sbjct: 44 ARVRQATGLSQVEFAEILGVSVRTLQDWEQGRRKPSGAAATLLKIAEKNPALLRE 98 >UniRef50_A6Q854 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q854_SULNB Length = 109 Score = 77.0 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 39/76 (51%) Query: 53 FMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPS 112 ++K + T+ I +RK L L+Q +++ +++ ++E+G P S Sbjct: 26 TKKELKRMGVEIAPVTITAGEIKIIRKSLKLSQSVFAKLLNVSLSSVRQWEQGIRTPSGS 85 Query: 113 TIKLLRVLDKHPELLN 128 T+ LL +L + PELLN Sbjct: 86 TMVLLELLQREPELLN 101 >UniRef50_Q39YW3 Transcriptional regulator, XRE family n=10 Tax=Proteobacteria RepID=Q39YW3_GEOMG Length = 103 Score = 77.0 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 38/82 (46%), Gaps = 2/82 (2%) Query: 51 DAFMAQVKAFRASVNAETVAPE--FIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQ 108 + + V+ +A E I R+K+ L+Q+E +++ G + +E+G Sbjct: 19 EELLQAVRDIKAGKVGRVSTLEISPIAAARQKIGLSQREFAKMLGVSLRTLQEWEQGRRT 78 Query: 109 PHPSTIKLLRVLDKHPELLNEI 130 P + L+ + K PE++ E+ Sbjct: 79 PSGAAKSLITIAIKKPEVIKEL 100 >UniRef50_A5G7I8 Helix-turn-helix domain protein n=2 Tax=Proteobacteria RepID=A5G7I8_GEOUR Length = 130 Score = 76.6 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 30/84 (35%) Query: 47 KEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGN 106 + + + R L+Q +++ G V +E+G Sbjct: 45 DGSVRRIITRRDGTIEKDEIIPAEKALVATARAATGLSQAAFAKLLGVSVRTLQEWEQGR 104 Query: 107 AQPHPSTIKLLRVLDKHPELLNEI 130 P + LL+V +HPE+L E+ Sbjct: 105 KMPSGAAATLLKVASRHPEVLQEL 128 >UniRef50_Q1NLC9 Helix-turn-helix motif n=12 Tax=cellular organisms RepID=Q1NLC9_9DELT Length = 96 Score = 76.2 bits (186), Expect = 3e-13, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 35/85 (41%), Gaps = 2/85 (2%) Query: 44 IMNK--EESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSR 101 + + + A K + VAP + VR+K+ L+Q E + + + Sbjct: 5 LFDDLVQSLKEAKAIAKGHAPASRRFEVAPPDVKAVREKIGLSQSEFARLMHVSIKTLQN 64 Query: 102 YEKGNAQPHPSTIKLLRVLDKHPEL 126 +E+ P + LL+++ P+L Sbjct: 65 WEQHRRTPTGPAVALLKIVSTAPDL 89 >UniRef50_A3DFY7 Uncharacterized phage-associated protein-like protein n=6 Tax=Firmicutes RepID=A3DFY7_CLOTH Length = 332 Score = 76.2 bits (186), Expect = 3e-13, Method: Composition-based stats. Identities = 25/129 (19%), Positives = 50/129 (38%), Gaps = 4/129 (3%) Query: 3 CPVCHQG-EMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 C C + E + I +G + G C C + + D + + Sbjct: 8 CEECRRDVEYMVETATIKGKLKGEEYEYTGKKA-ICTECGSEVYVADIEDENLKALYDTY 66 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 N ++ E I+++ +K ++ ++ S + G G FSRY +G+ + L ++ D Sbjct: 67 RQKNG-IISLEKILEIPQKYNIGKRPLSLLLGWGEMTFSRYCEGDMPTKQYSDILQKIYD 125 Query: 122 KHPELLNEI 130 P E+ Sbjct: 126 D-PAYYKEL 133 >UniRef50_A3XE19 Transcriptional regulator, XRE family protein n=5 Tax=Rhodobacterales RepID=A3XE19_9RHOB Length = 97 Score = 76.2 bits (186), Expect = 3e-13, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 34/71 (47%) Query: 60 FRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRV 119 A V+ +VA + +VR++ L+Q E ++ G +E G QP LL + Sbjct: 23 ANAKVHEVSVAEVDVAQVRQRTGLSQAEFAKSIGVAKGTLLNWEHGRRQPTGPAQVLLAL 82 Query: 120 LDKHPELLNEI 130 + K P ++ ++ Sbjct: 83 IAKKPSVVQDL 93 >UniRef50_Q7N0B1 Similar to unknown protein n=6 Tax=Enterobacteriaceae RepID=Q7N0B1_PHOLL Length = 98 Score = 75.8 bits (185), Expect = 4e-13, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 34/67 (50%) Query: 64 VNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKH 123 N + +R+ L Q E +E G + +E+ P S++KLL++L+++ Sbjct: 29 ENIHYHRLPDVKNLRETFGLKQSEFAEAVGVSTSLIQSWEQHRRIPSGSSLKLLKMLERN 88 Query: 124 PELLNEI 130 P L+NE+ Sbjct: 89 PALINEL 95 >UniRef50_B4TA30 DNA-binding protein n=47 Tax=Proteobacteria RepID=B4TA30_SALHS Length = 107 Score = 75.5 bits (184), Expect = 5e-13, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 36/82 (43%) Query: 42 ESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSR 101 + + + + + + + P I +R+KL+++Q + V+ + Sbjct: 20 SGLFSVDAIPQETMRSFDTACLSSIKDLQPLEIKALREKLNVSQPVFARYLNTSVSTVQK 79 Query: 102 YEKGNAQPHPSTIKLLRVLDKH 123 +E G +P ++KLL V+ KH Sbjct: 80 WESGAKRPSGMSLKLLNVVQKH 101 >UniRef50_Q1QKM4 Transcriptional regulator, XRE family n=3 Tax=Bradyrhizobiaceae RepID=Q1QKM4_NITHX Length = 121 Score = 75.1 bits (183), Expect = 6e-13, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 24/55 (43%) Query: 73 FIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELL 127 + +R++ LTQ E + G V +E+G P LL V+ PE + Sbjct: 57 EVRDLRQRARLTQIEFAARLGVPVETIRNWEQGKRAPRGPARALLAVIAHAPETV 111 >UniRef50_D1RWL1 Putative uncharacterized protein n=1 Tax=Serratia odorifera 4Rx13 RepID=D1RWL1_SEROD Length = 147 Score = 75.1 bits (183), Expect = 7e-13, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 34/82 (41%) Query: 42 ESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSR 101 E + + V E + P+ I +R++L L+Q + ++ + Sbjct: 60 EGLHQVGAISQETMRSFDESCLVPLEELQPKEIKALREQLHLSQPVFARYLNTSLSTIQK 119 Query: 102 YEKGNAQPHPSTIKLLRVLDKH 123 +E G P ++KLL ++ KH Sbjct: 120 WESGAKLPGGPSLKLLSIVQKH 141 >UniRef50_B0P3V7 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P3V7_9CLOT Length = 357 Score = 75.1 bits (183), Expect = 7e-13, Method: Composition-based stats. Identities = 17/130 (13%), Positives = 48/130 (36%), Gaps = 3/130 (2%) Query: 3 CPVCHQG-EMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 C C + + + + + + +G C +C+ + +D +++ Sbjct: 28 CSKCRKRVSYKIFKRPVKVKIKDMELEYEEYYG-ICDNCKSELFVPGVTDQNEERIEELY 86 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 + I K+ K ++ ++ S++ G G +RY G + L +L+ Sbjct: 87 RK-RKNLITISEIKKILNKYNIEKRPLSKLLGMGELTITRYMDGQLPSKKYSDYLYEILN 145 Query: 122 KHPELLNEIR 131 ++ + ++ Sbjct: 146 DEQKMKSIVK 155 >UniRef50_Q3B427 Transcriptional regulator, XRE family n=6 Tax=Bacteria RepID=Q3B427_PELLD Length = 102 Score = 74.7 bits (182), Expect = 8e-13, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 35/77 (45%) Query: 51 DAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPH 110 + +A + P + VR+K LTQ+ + FG V +E+G+ +PH Sbjct: 13 EEAIAYMGGEDVGARVYRPRPIDVKVVREKTGLTQERFAAAFGISVATLRHWERGDRKPH 72 Query: 111 PSTIKLLRVLDKHPELL 127 + LL ++ K P+ + Sbjct: 73 GPALVLLDLVRKAPDTV 89 >UniRef50_B1ZE25 Transcriptional regulator, XRE family n=8 Tax=Bacteria RepID=B1ZE25_METPB Length = 108 Score = 74.3 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 34/73 (46%) Query: 50 SDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQP 109 D + E + PE I ++R+ S++Q ++ + S++E+G +P Sbjct: 29 IDKATMRRFDLSCLTPVEPLEPEAIRQIREASSMSQAVFAKALNVTASLVSQWERGEKKP 88 Query: 110 HPSTIKLLRVLDK 122 ++KLL + ++ Sbjct: 89 SGPSLKLLNLAER 101 >UniRef50_A7HZA9 DNA-binding protein n=24 Tax=Bacteria RepID=A7HZA9_PARL1 Length = 107 Score = 74.3 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 12/84 (14%), Positives = 31/84 (36%) Query: 39 HCEESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNA 98 E + + D ++P I +R++ ++Q + Sbjct: 17 ETAEGLFRRGLIDKTTMSGFDVLCLEPVRDLSPRKIKSLRERHKVSQPVFAAYLNVSAAT 76 Query: 99 FSRYEKGNAQPHPSTIKLLRVLDK 122 +E+G +P ++KLL ++++ Sbjct: 77 VKAWEQGAKKPAGPSLKLLNLIER 100 >UniRef50_Q1YM79 Putative uncharacterized protein n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YM79_MOBAS Length = 123 Score = 74.3 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 43/106 (40%), Gaps = 13/106 (12%) Query: 37 CVHCEESIMNKEESDAFMAQV-------------KAFRASVNAETVAPEFIVKVRKKLSL 83 C CE + ++ + A + + +V+ + + ++R+KL L Sbjct: 6 CSDCERVMKARKTQEEADAHMLESLEQALKWFQGDDSQVTVHRYKIEVPDVARLRRKLKL 65 Query: 84 TQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNE 129 TQ + + G + +E+G P LL VL + PEL+ E Sbjct: 66 TQADFALKIGVPIATLRNWEQGRRYPTGPARVLLNVLARRPELVME 111 >UniRef50_B9ZKV2 Transcriptional regulator, XRE family n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZKV2_9GAMM Length = 96 Score = 74.3 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 32/83 (38%), Gaps = 1/83 (1%) Query: 45 MNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEK 104 + + +DA V + +R+K ++Q+ FG + +E+ Sbjct: 8 IAEGLADAIDHARGDPSGIVEHRPETL-DVKAIREKTGMSQQRFCAAFGISIGTLRHWEQ 66 Query: 105 GNAQPHPSTIKLLRVLDKHPELL 127 G P LL+V++ PE + Sbjct: 67 GLRAPRGPARVLLKVVENDPEAV 89 >UniRef50_B2FJQ1 Putative DNA-binding protein n=1 Tax=Stenotrophomonas maltophilia K279a RepID=B2FJQ1_STRMK Length = 110 Score = 74.3 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 30/80 (37%) Query: 43 SIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRY 102 + D + + I +R L L+Q + + V+ + Sbjct: 24 GLYASGFIDKRRMSMYEALCLEPVPEYSSAQIRALRTSLELSQPVFAGVLNTSVSTVRSW 83 Query: 103 EKGNAQPHPSTIKLLRVLDK 122 E+G +P ++KLL ++D+ Sbjct: 84 EQGEKKPSGPSLKLLNLIDR 103 >UniRef50_B1TDU4 Putative uncharacterized protein n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1TDU4_9BURK Length = 81 Score = 74.3 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 25/50 (50%) Query: 82 SLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEIR 131 + Q + + G V + +E+G P + LLRV +HPE L +++ Sbjct: 29 GIAQSAFASLLGVSVRTYQDWEQGRRNPTGAAQTLLRVAVQHPEALQDLQ 78 >UniRef50_C6N0S5 XRE family transcriptional regulator n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N0S5_9GAMM Length = 101 Score = 74.3 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 39/89 (43%) Query: 42 ESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSR 101 E I ++ ++ E + ++R+ L L++KE ++ FG Sbjct: 9 EIIQGMTDAIEYIRGNSGTAKINKVEIPNVIDVREIRENLKLSRKEFADSFGFSSRTLQH 68 Query: 102 YEKGNAQPHPSTIKLLRVLDKHPELLNEI 130 +E+G+ PH S LL +L + P + +I Sbjct: 69 WEQGDRVPHGSAKILLLLLQREPATIAKI 97 >UniRef50_A7HUI5 Helix-turn-helix domain protein n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HUI5_PARL1 Length = 102 Score = 74.3 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 40/81 (49%) Query: 49 ESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQ 108 + + + + V TVAP + K RK L +TQ + + + G V+ ++E+G Q Sbjct: 11 SMEEALEHARGGKTGVRVHTVAPVDVKKARKALKMTQPDFARLVGTSVSGLQKWEQGKRQ 70 Query: 109 PHPSTIKLLRVLDKHPELLNE 129 P + L+ ++ + PE + + Sbjct: 71 PGGAARTLITLIMRAPEAVRD 91 >UniRef50_A9L1Q6 DNA-binding protein n=7 Tax=Proteobacteria RepID=A9L1Q6_SHEB9 Length = 101 Score = 73.9 bits (180), Expect = 1e-12, Method: Composition-based stats. Identities = 10/81 (12%), Positives = 29/81 (35%) Query: 43 SIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRY 102 + + + + + I ++R +++Q + V++ ++ Sbjct: 14 GLHDAGVMKTSTMREFDELCLPEIKVLTAAEIKRIRVANNVSQPVFAHCLNVSVSSVQKW 73 Query: 103 EKGNAQPHPSTIKLLRVLDKH 123 E+G P + LL ++ K Sbjct: 74 EQGTRHPDGPALTLLNLVKKQ 94 >UniRef50_B2UKR2 Transcriptional regulator, XRE family n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UKR2_AKKM8 Length = 147 Score = 73.9 bits (180), Expect = 1e-12, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 35/58 (60%) Query: 71 PEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLN 128 + I ++RK ++QK+ + + G + ++E G +P + KLL +++KHPEL+N Sbjct: 89 EKSIARLRKSQGMSQKDFAAVLGVSPSTLVKWEHGLRRPCGPSAKLLDLIEKHPELIN 146 >UniRef50_Q9KMA5 Antitoxin higA-2 n=32 Tax=Proteobacteria RepID=HIGA2_VIBCH Length = 104 Score = 73.9 bits (180), Expect = 1e-12, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 37/67 (55%) Query: 64 VNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKH 123 V ++P+ IV +R++ ++++ + + +E+G + P+ + LL+++ +H Sbjct: 35 VGELNISPDEIVSIREQFNMSRGVFARLLHTSSRTLENWEQGRSVPNGQAVTLLKLVQRH 94 Query: 124 PELLNEI 130 PE L+ I Sbjct: 95 PETLSHI 101 >UniRef50_A8GWH9 Putative transcriptional regulator n=2 Tax=Rickettsia bellii RepID=A8GWH9_RICB8 Length = 97 Score = 73.9 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 30/61 (49%) Query: 67 ETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPEL 126 + I+ +RK L L+Q + + + V +E+G +P I LL++ KHPE+ Sbjct: 32 KIETKTDIIDIRKHLHLSQVDFAALMHINVRTLQEWEQGRRRPRGPAISLLKIASKHPEI 91 Query: 127 L 127 Sbjct: 92 F 92 >UniRef50_Q0AU89 Putative uncharacterized protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AU89_SYNWW Length = 336 Score = 73.5 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 45/118 (38%), Gaps = 3/118 (2%) Query: 3 CPVCHQGEMVSGIKDIPY-TFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 C +C Q V+ K+ T +G + YC C + +DA + ++ Sbjct: 6 CYLCDQSSEVTVKKEEEIHTIKGTPVKC-EVENAYCGQCGSKVYIPALNDANLDRMDHTY 64 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRV 119 N + + I ++ ++ ++ K + + G G RY KG + LL + Sbjct: 65 RRQNG-IITVQEIEEILRQYNIGAKPLAAMLGWGEVTILRYLKGQIPDRAHSNTLLSL 121 >UniRef50_C1TS72 Predicted transcriptional regulator, COG2944 n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TS72_9BACT Length = 100 Score = 73.5 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 29/78 (37%) Query: 44 IMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYE 103 + Q +PE I +R L+QK + + ++ ++E Sbjct: 15 LYEAGSFSKNQMQNFDVMCLPKVPNYSPENIKHIRSLYDLSQKNLAFLLNVSLSTLQKWE 74 Query: 104 KGNAQPHPSTIKLLRVLD 121 G +P + KLL VL+ Sbjct: 75 TGAKKPAGAARKLLNVLE 92 >UniRef50_C7JIU1 Transcriptional regulator Xre n=8 Tax=Acetobacter pasteurianus RepID=C7JIU1_ACEP3 Length = 98 Score = 73.5 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 28/58 (48%) Query: 73 FIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEI 130 + +R + L+Q + ++ G +E G QP LL +LDK P L++E+ Sbjct: 36 NVAAIRTRTGLSQAQFAKSIGVAKGTLLNWEHGRRQPTGPAQVLLAMLDKRPSLVSEL 93 >UniRef50_D1AHE8 Putative uncharacterized protein n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AHE8_SEBTE Length = 214 Score = 73.1 bits (178), Expect = 2e-12, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 44/120 (36%), Gaps = 3/120 (2%) Query: 12 VSGIKDIPYTFRGRKTVLKGIHGLYCV-HCEESIMNKEESDAFMAQVKAFRASVNAETVA 70 + I T++ + + I E I + + +V + + Sbjct: 3 IEKIVSKKKTYKVKNLDITFIEQTKINIETGEEIFDSKLEKENGIRVTDEYKNQVGLLTS 62 Query: 71 PEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEI 130 E + K+R K ++Q E + + G +RYE G + S L+R++ + L + Sbjct: 63 NE-LKKIRNKYKISQIEFALLLDLGEKNITRYENG-MIQNKSIDSLIRLMKNNMNFLTLL 120 >UniRef50_A8GG35 Transcriptional regulator, XRE family n=2 Tax=Proteobacteria RepID=A8GG35_SERP5 Length = 100 Score = 73.1 bits (178), Expect = 2e-12, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 36/82 (43%) Query: 42 ESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSR 101 + + DA + + P I +R++ +++Q + A + Sbjct: 13 QELHQAGFVDASTMRTFDMLCLRPVKQYTPADIRALRERENVSQPVFALHLNVSKKAVQK 72 Query: 102 YEKGNAQPHPSTIKLLRVLDKH 123 +E+G A P+ + +KLL ++D++ Sbjct: 73 WERGEAVPNSAAMKLLSLVDRN 94 >UniRef50_B0T885 Transcriptional regulator, XRE family n=2 Tax=Alphaproteobacteria RepID=B0T885_CAUSK Length = 99 Score = 73.1 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 2/70 (2%) Query: 62 ASVNAETVAPEFI--VKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRV 119 SV A AP + +R++L L+Q + FG +A +E+ +P + LL V Sbjct: 25 RSVPARVHAPAEVDVRAIRQRLGLSQNAFAARFGFSASAVKDWEQHRRRPEAAARILLTV 84 Query: 120 LDKHPELLNE 129 +D+ P + Sbjct: 85 IDREPAAVER 94 >UniRef50_C6MUZ5 Transcriptional regulator, XRE family n=1 Tax=Geobacter sp. M18 RepID=C6MUZ5_9DELT Length = 272 Score = 73.1 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 49/117 (41%), Gaps = 4/117 (3%) Query: 2 KCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 +C C+ ++ +K +F+ R+ + + C +C+ + +++ + Sbjct: 4 ECLDCNVKLILEKVKK-SVSFKDRQLEI-EYNVEVCPNCKIEYASVDQASDIQFALAEAY 61 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLR 118 + + A E + R + L+Q +E+ GV + R+E G Q S LL+ Sbjct: 62 KKQSNKMTAAE-MKSQRAEKHLSQTGLAELLNVGVASIKRWESGLVQ-SRSMDNLLK 116 >UniRef50_A7BVU4 Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BVU4_9GAMM Length = 173 Score = 73.1 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 43/135 (31%), Gaps = 13/135 (9%) Query: 3 CPVCH-QGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 C C + + + + T RG C C E + DA + +R Sbjct: 5 CLTCDYEEALELKRESVIITVRGETIEATE-ELYQCPACGEKFTSSHGHDALEEAYREYR 63 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPS--------- 112 N V PE I R+ LT E S + +R+E+G Q Sbjct: 64 RRHN--LVQPEDIRHWREHYGLTLTELSHLLEWDEATLNRFEQGALQEVSEDKWLKFIMI 121 Query: 113 TIKLLRVLDKHPELL 127 LL ++ PE Sbjct: 122 PQNLLYLIVSKPETF 136 >UniRef50_A9IKE0 Putative DNA-binding protein n=1 Tax=Bartonella tribocorum CIP 105476 RepID=A9IKE0_BART1 Length = 104 Score = 73.1 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 36/92 (39%) Query: 38 VHCEESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVN 97 I+ A+ +A A + K+RK + LTQ + + FG V Sbjct: 5 NKAGSRILQGAREALAYAKGEADVTKFGIHIPANVDVKKIRKHIGLTQTQFAARFGFSVG 64 Query: 98 AFSRYEKGNAQPHPSTIKLLRVLDKHPELLNE 129 +E+G S+ LL +++ PE ++ Sbjct: 65 RIRDWEQGRYSIDTSSRLLLSIIENEPEAIDR 96 >UniRef50_A3V8Z5 Transcriptional regulator, XRE family n=2 Tax=Bacteria RepID=A3V8Z5_9RHOB Length = 107 Score = 72.8 bits (177), Expect = 3e-12, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 32/67 (47%) Query: 60 FRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRV 119 + A A ++ ++R++L LTQ + + ++ +E+G P LL++ Sbjct: 33 LEDDLAALADAGDYARQIRRRLGLTQVQLATKLDVPIDTLRNWEQGKRYPTGPAKALLKI 92 Query: 120 LDKHPEL 126 LD+ PE Sbjct: 93 LDRAPEA 99 >UniRef50_C0GWH0 Transcriptional regulator, XRE family n=4 Tax=Proteobacteria RepID=C0GWH0_9DELT Length = 95 Score = 72.8 bits (177), Expect = 3e-12, Method: Composition-based stats. Identities = 13/88 (14%), Positives = 32/88 (36%), Gaps = 2/88 (2%) Query: 41 EESIMNK--EESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNA 98 E+ + + V+ + +R+++ L+Q E + + V Sbjct: 2 EQQLFDDLVSSLKEAKKISHGESQPSRRFEVSSTDVKSLRERVGLSQSEFARLMRVSVKT 61 Query: 99 FSRYEKGNAQPHPSTIKLLRVLDKHPEL 126 +E+ +P LL ++ K P++ Sbjct: 62 LQNWEQHRRKPSGPAAALLTIVSKAPDV 89 >UniRef50_Q1I9J8 Putative transcriptional regulator n=1 Tax=Pseudomonas entomophila L48 RepID=Q1I9J8_PSEE4 Length = 93 Score = 72.8 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 11/65 (16%), Positives = 26/65 (40%) Query: 58 KAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLL 117 + E I ++R+ L+ +Q + + ++E+G +P +KLL Sbjct: 22 FEALCPAPVRAFSAEDIKRLREALNFSQPVFALHLHTSASTVRKWEQGETRPAGPALKLL 81 Query: 118 RVLDK 122 ++ Sbjct: 82 NLIAD 86 >UniRef50_C6S831 Putative transcriptional regulator n=2 Tax=Neisseria meningitidis RepID=C6S831_NEIML Length = 217 Score = 72.8 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 37/82 (45%) Query: 49 ESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQ 108 + + ++A A ++PE I +R+ L+ +Q + V + +E+G + Sbjct: 133 QGKITLRAIEAEIPENGAAAISPEEIRAIRESLNFSQAVFARKLRCSVRTYQGWEQGKTR 192 Query: 109 PHPSTIKLLRVLDKHPELLNEI 130 P+P L R++ K P+ I Sbjct: 193 PNPQAALLRRMVQKSPKTFKTI 214 >UniRef50_B3EG51 Transcriptional regulator, XRE family n=5 Tax=Chlorobium/Pelodictyon group RepID=B3EG51_CHLL2 Length = 96 Score = 72.4 bits (176), Expect = 4e-12, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 30/64 (46%) Query: 66 AETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPE 125 A + +R+ L LTQ E S FG V A +E+ QP + LL+V+ + PE Sbjct: 29 AHVPDEVDVKAIRQSLGLTQPEFSLRFGFDVRAVQDWEQKRRQPDRAARVLLKVIAREPE 88 Query: 126 LLNE 129 + Sbjct: 89 AVQR 92 >UniRef50_B8IBQ3 Transcriptional regulator, XRE family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IBQ3_METNO Length = 119 Score = 72.4 bits (176), Expect = 4e-12, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 36/89 (40%) Query: 38 VHCEESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVN 97 + +++ M + + + +R++L++TQ ++ G V Sbjct: 17 DQAKIEATTEKDIRRHMIEDGQNPDAEPTGYRPVLSVTTIRERLNMTQTVFAQALGVPVA 76 Query: 98 AFSRYEKGNAQPHPSTIKLLRVLDKHPEL 126 +E+G QP P+ LL ++ + PE Sbjct: 77 TIRNWEQGRKQPDPAARSLLTIVAREPEA 105 >UniRef50_C8Q118 Transcriptional regulator, XRE family n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8Q118_9GAMM Length = 109 Score = 72.4 bits (176), Expect = 4e-12, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 40/91 (43%), Gaps = 4/91 (4%) Query: 43 SIMNKEESDAFMAQVKAFRAS---VNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAF 99 E + V+ +A V + + E I + R+ + L+Q+E +EI G V Sbjct: 18 EFTGDELGALLLESVRQAKAGQGVVREQPIVNEAI-EARQNVGLSQREFAEILGVSVRTL 76 Query: 100 SRYEKGNAQPHPSTIKLLRVLDKHPELLNEI 130 +E+G P + LL++ P++L + Sbjct: 77 QAWEQGKRYPSKAASVLLKIAKVEPQVLLRV 107 >UniRef50_Q6MCF7 Putative uncharacterized protein n=2 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MCF7_PARUW Length = 118 Score = 72.4 bits (176), Expect = 4e-12, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 35/64 (54%) Query: 67 ETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPEL 126 + + I ++R KL+ +Q + +N +E+G+ +P+ + ++LL ++D+ P+ Sbjct: 43 KEYQAKDIKQLRNKLNCSQSLLAAYLNISLNTIQAWEQGSRRPNHAALRLLEIMDRGPQF 102 Query: 127 LNEI 130 L + Sbjct: 103 LASL 106 >UniRef50_Q01NF8 Transcriptional regulator, XRE family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NF8_SOLUE Length = 124 Score = 72.0 bits (175), Expect = 5e-12, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 34/82 (41%), Gaps = 2/82 (2%) Query: 48 EESDAFMAQVKAFRASVNAETVAPEF--IVKVRKKLSLTQKEASEIFGGGVNAFSRYEKG 105 + A ++ P + +R+KL L+Q + + +FG V + +E+G Sbjct: 36 DSLKELQAHLRGEIRLTETLYHVPPETDVRALRQKLGLSQSDFAALFGFNVRSLQDWEQG 95 Query: 106 NAQPHPSTIKLLRVLDKHPELL 127 +P L V+ + P+ + Sbjct: 96 RRRPEIPIRAYLAVIQRDPQAV 117 >UniRef50_Q88NK9 Transcriptional regulator, Cro/CI family n=56 Tax=Gammaproteobacteria RepID=Q88NK9_PSEPK Length = 98 Score = 72.0 bits (175), Expect = 5e-12, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 28/80 (35%) Query: 48 EESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNA 107 E + R V + K+R+ L+Q ++ V +E+G Sbjct: 14 ESMTQMDEIDRGERQPSREFHVDALQVKKIRQATGLSQAAFAKRIDVAVGTLRNWEQGRR 73 Query: 108 QPHPSTIKLLRVLDKHPELL 127 +P LLR + PE + Sbjct: 74 EPEGPARALLRAIHNDPEHV 93 >UniRef50_A1WP30 Transcriptional regulator, XRE family n=4 Tax=Proteobacteria RepID=A1WP30_VEREI Length = 107 Score = 72.0 bits (175), Expect = 5e-12, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 40/105 (38%), Gaps = 5/105 (4%) Query: 26 KTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQ 85 K ++ + E + + ++ A T + + R+K LTQ Sbjct: 5 KIDIEKVATAIEADAGEVLPDLRQALAEAKAGIG-----RVTTPEQLLVRRAREKSGLTQ 59 Query: 86 KEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEI 130 +E V +E+G P + LLR+L KHPEL E+ Sbjct: 60 AAFAERIATPVATLRDWEQGRFVPPGGVLCLLRLLVKHPELSQEL 104 >UniRef50_B3GN69 Putative HTH_XRE family transcription factor n=1 Tax=Zymomonas mobilis subsp. mobilis RepID=B3GN69_ZYMMO Length = 116 Score = 72.0 bits (175), Expect = 6e-12, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 41/83 (49%) Query: 45 MNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEK 104 M E+ + +A +N + I +R+KL ++QK +E F ++A +E+ Sbjct: 26 MTDEDIEQQIADNPDAAPLLNEKQQIGGMIQIIRRKLEMSQKAFAENFHLSIHALRDWEQ 85 Query: 105 GNAQPHPSTIKLLRVLDKHPELL 127 G +P T+ L V+ +P+++ Sbjct: 86 GRRKPEQGTLNYLYVIRDNPDIV 108 >UniRef50_Q73NN7 DNA-binding protein, putative n=1 Tax=Treponema denticola RepID=Q73NN7_TREDE Length = 102 Score = 71.6 bits (174), Expect = 7e-12, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 37/91 (40%), Gaps = 7/91 (7%) Query: 45 MNKEESDAFMAQVKAFRASVNAETVAPE-------FIVKVRKKLSLTQKEASEIFGGGVN 97 M+ E + VK E I K+R K + TQ+E + + + Sbjct: 7 MSDEMFAELLQSVKEAVLIEKGEIPPARVFEIEPLDIAKIRSKTNKTQEEFASMLNISIG 66 Query: 98 AFSRYEKGNAQPHPSTIKLLRVLDKHPELLN 128 +E+G +P + + LL+++ +P+ + Sbjct: 67 TLRNWEQGRRKPDGAALSLLKIVSANPQYVE 97 >UniRef50_C8WN21 Transcriptional regulator, XRE family n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WN21_EGGLE Length = 306 Score = 71.6 bits (174), Expect = 7e-12, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 38/99 (38%), Gaps = 5/99 (5%) Query: 30 KGIHGLYCVHCEESI-MNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEA 88 I L C C SI + F +A+R + + PE IV +RKK +Q+ Sbjct: 5 VDIEHLICPKCGNSIGWAPLVDEGFDKLYRAYREKMG--IMQPEEIVALRKKYGFSQRVF 62 Query: 89 SEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELL 127 + G+ + RYE G+ L + P L Sbjct: 63 AAALDIGIASLQRYESGSLASDSHAQLLAN--ARDPRFL 99 >UniRef50_C4Z706 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=C4Z706_EUBE2 Length = 178 Score = 71.6 bits (174), Expect = 8e-12, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 35/65 (53%) Query: 66 AETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPE 125 + + E I +RK L LTQKE + + G R+EK NA+ + L ++++ +P+ Sbjct: 5 KDYITSEDIKNLRKNLGLTQKEFASLVGTSKPTIERWEKENAKITGPIVLLSKMINDYPD 64 Query: 126 LLNEI 130 +N + Sbjct: 65 YVNRL 69 >UniRef50_B4S2A5 DNA-binding protein n=2 Tax=Gammaproteobacteria RepID=B4S2A5_ALTMD Length = 101 Score = 71.2 bits (173), Expect = 9e-12, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 45/98 (45%), Gaps = 5/98 (5%) Query: 25 RKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLT 84 ++++L +H E +M+K+ F A + + I +R+K ++ Sbjct: 2 KESILDVVHSTAKDLSEAGVMDKQTMHQFDAL-----CLPKLKQYDGQRIKAIREKARVS 56 Query: 85 QKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 Q + + ++E+G+ +P +++KLL ++++ Sbjct: 57 QAVFAAYLNITPSTIKQWEQGSKKPRGTSLKLLSLVEQ 94 >UniRef50_Q2SMC7 Predicted transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SMC7_HAHCH Length = 191 Score = 71.2 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 28/61 (45%) Query: 69 VAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLN 128 + I R K L+Q++ ++ V +E+ P S L+++ KHPE++ Sbjct: 1 MMNSEISGARLKAGLSQRDFAKALQISVRTLQEWEQNRRSPSGSAKALVKIAIKHPEIIR 60 Query: 129 E 129 E Sbjct: 61 E 61 >UniRef50_A9N8E3 DNA-binding protein n=19 Tax=Bacteria RepID=A9N8E3_COXBR Length = 113 Score = 71.2 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 33/80 (41%) Query: 43 SIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRY 102 + + DA ++P I ++R ++Q ++ V+ ++ Sbjct: 27 GLYDAGVIDATTMHEFDALCLTPVRELSPREIKRIRIHEKVSQAVFAKYLNTSVSTVKQW 86 Query: 103 EKGNAQPHPSTIKLLRVLDK 122 E G P +++KLL ++D+ Sbjct: 87 ELGEKHPRGTSLKLLNLVDR 106 >UniRef50_C4SSE5 Predicted transcriptional regulator n=1 Tax=Yersinia frederiksenii ATCC 33641 RepID=C4SSE5_YERFR Length = 117 Score = 71.2 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 39/102 (38%), Gaps = 1/102 (0%) Query: 19 PYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVR 78 YT G + +G +C + + + ++ +A + I +R Sbjct: 3 HYTESGLT-TVWLANGYHCDVIDGEQFTSIDDVDGLHRLIDKIFVNRCNPLAADEIRFIR 61 Query: 79 KKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVL 120 +++++QK + + G V +R+EK + LR L Sbjct: 62 IEMNMSQKALAALLGVDVQTVARWEKEQTNLPRTAEVSLRAL 103 >UniRef50_B8ILW2 Transcriptional regulator, XRE family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8ILW2_METNO Length = 120 Score = 71.2 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 29/63 (46%) Query: 63 SVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 + + + RK LSLTQ+ + G + +E+G +P P+ L+R++ Sbjct: 48 EEIERGLFARDVRRTRKSLSLTQEGFAAALGIPLGTLRNWEQGRVRPDPALRALIRLVKD 107 Query: 123 HPE 125 PE Sbjct: 108 DPE 110 >UniRef50_A8V2S1 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V2S1_9AQUI Length = 128 Score = 70.8 bits (172), Expect = 1e-11, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 3/61 (4%) Query: 69 VAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLN 128 + + I ++RKKL LTQ+E +++ G G +R+E G ++P L L+K L+ Sbjct: 1 MTGKEIRELRKKLGLTQEEFAQLLGVGFTTVNRWENGKSEPRGQA---LEALEKLRTLIE 57 Query: 129 E 129 E Sbjct: 58 E 58 >UniRef50_Q89JN3 Bll5250 protein n=3 Tax=Bradyrhizobium RepID=Q89JN3_BRAJA Length = 100 Score = 70.8 bits (172), Expect = 1e-11, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 24/54 (44%) Query: 74 IVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELL 127 + +R++ LTQ E + G V +E+G P LL V+ P+ + Sbjct: 40 VRDLRRRACLTQMEFAAKLGVPVETIRNWEQGKRAPRGPARALLAVIAHAPDTV 93 >UniRef50_B8F4C3 Predicted helix-turn-helix containing protein n=2 Tax=Haemophilus parasuis RepID=B8F4C3_HAEPS Length = 98 Score = 70.8 bits (172), Expect = 1e-11, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 35/90 (38%) Query: 42 ESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSR 101 E +M + + + + +R + + Q E + + G N Sbjct: 7 ERLMESAREMVAIEKGEIEVPPHRIHIHKIPNVKAIRTQHQMKQAEFASLLGVSQNLVQS 66 Query: 102 YEKGNAQPHPSTIKLLRVLDKHPELLNEIR 131 +E G P+ + KLL ++++ P L+ ++ Sbjct: 67 WEIGRRTPNGAARKLLAIIEQQPNLVPVLQ 96 >UniRef50_Q2IXH5 Transcriptional regulator, XRE family n=6 Tax=Bradyrhizobiaceae RepID=Q2IXH5_RHOP2 Length = 133 Score = 70.4 bits (171), Expect = 1e-11, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 26/54 (48%) Query: 74 IVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELL 127 + +R++ LTQ E ++ G V+ +E+G P LL V+ P+ + Sbjct: 65 VRDLRRRARLTQTEFADRLGVPVDTIRNWEQGKRLPRGPARALLSVIAHAPDTV 118 >UniRef50_Q9JXT5 Helix-turn-helix family protein n=1 Tax=Neisseria meningitidis serogroup B RepID=Q9JXT5_NEIMB Length = 103 Score = 70.4 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 33/81 (40%) Query: 42 ESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSR 101 E N D + + ++ I +R+K +L+Q + G N S Sbjct: 16 EGAYNIGAIDKKTMRDFDKSCLTEIKPLSGGDIKAIREKEALSQAAFAIYLNVGKNHVSA 75 Query: 102 YEKGNAQPHPSTIKLLRVLDK 122 +E+G +P + +KLL ++ Sbjct: 76 WERGVKKPSGAALKLLTIVKN 96 >UniRef50_C4ZEX8 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C4ZEX8_EUBR3 Length = 101 Score = 70.1 bits (170), Expect = 2e-11, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 34/83 (40%), Gaps = 4/83 (4%) Query: 48 EESDAFMAQVKAFRAS----VNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYE 103 EE+ A+ A R + + + + I +R K +TQ + G + +E Sbjct: 13 EEAIAYEKGYGAGRVKTYMILPVKEYSGKEIRDIRTKAGMTQSVFASYMGVSIKTVEAWE 72 Query: 104 KGNAQPHPSTIKLLRVLDKHPEL 126 G P +LL +L K+ E+ Sbjct: 73 GGRTHPTGPVFRLLDILSKNEEM 95 >UniRef50_A7ZY95 Helix-turn-helix DNA-binding domain protein n=17 Tax=Escherichia coli RepID=A7ZY95_ECOHS Length = 109 Score = 70.1 bits (170), Expect = 2e-11, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 40/91 (43%), Gaps = 4/91 (4%) Query: 43 SIMNKEESDAFMAQVKAFR---ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAF 99 +M+ E DA VKA +++ E I +R + ++Q + G + Sbjct: 19 GLMSDSEVDAIAVMVKAREVSARIAKVKSMTGEEIKAIRTRYGMSQSVLAHTMGMSKESV 78 Query: 100 SRYEKGNAQPHPSTIKLLR-VLDKHPELLNE 129 S++E+ +P +++L + K PE+ + Sbjct: 79 SKWERNEIKPSGPALRILNTLAIKGPEVFAK 109 >UniRef50_Q6ALK0 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6ALK0_DESPS Length = 206 Score = 70.1 bits (170), Expect = 2e-11, Method: Composition-based stats. Identities = 16/137 (11%), Positives = 42/137 (30%), Gaps = 18/137 (13%) Query: 1 MKCPVCHQGEMVSGIKDIPYTFRGRKTVLK-GIHGLYCVHCE-ESIMNKEESDAFMAQVK 58 + CP C + + C C + + + + + Sbjct: 4 LTCPACGSHNITQQKEIKKIFTDHLDKETHIETLYEECQECGMDGEFSIDNDEIINNALA 63 Query: 59 AFRASVNAETVAP----EFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTI 114 R+ ++ + + + + L L Q+ S+++ G +P S Sbjct: 64 DTRSETISKILTELSNHHSLAGIERSLDLPQR-----------TLSKWKNG-TKPTRSGT 111 Query: 115 KLLRVLDKHPELLNEIR 131 L++++ P L+ + Sbjct: 112 TLVKLIAIFPWLIKIAQ 128 >UniRef50_B5UX67 Prophage ps3 protein 01, putative n=10 Tax=Firmicutes RepID=B5UX67_BACCE Length = 334 Score = 70.1 bits (170), Expect = 2e-11, Method: Composition-based stats. Identities = 23/129 (17%), Positives = 44/129 (34%), Gaps = 3/129 (2%) Query: 3 CPVCHQG-EMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 C C + + RG++ G C C+ I D + Q+ Sbjct: 5 CEFCRDMVKYSTKDVSKVTVIRGKQYHYVGKEA-NCEECKSEIFVPNIHDYNLEQLDHAY 63 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 + V I +V +K + ++ S + G G +RY G+ + L R+ Sbjct: 64 RQQE-QLVTISEIREVLEKYKIGKRPLSLLLGWGEVTLTRYVNGDIPTKQYSDILKRLGR 122 Query: 122 KHPELLNEI 130 +L+ + Sbjct: 123 DQSFMLDIL 131 >UniRef50_Q0G0M0 DNA-binding protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G0M0_9RHIZ Length = 111 Score = 69.7 bits (169), Expect = 3e-11, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 41/93 (44%), Gaps = 3/93 (3%) Query: 39 HCEESIMNKEESDAFMAQVKAFR-ASVNAETVAPEFI--VKVRKKLSLTQKEASEIFGGG 95 E+ + + ++ A + A PE I VR+ L L+Q + + FG Sbjct: 13 DTGEAFVEVPKVESLGQLKSELENAGIEARKHGPEPISARAVREALHLSQAQFALRFGLE 72 Query: 96 VNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLN 128 +E+G ++P+ + + LL + ++PE + Sbjct: 73 EATVKNWEQGKSKPNATAMTLLWTIHRNPEAVA 105 >UniRef50_B1Z950 Putative uncharacterized protein n=1 Tax=Methylobacterium populi BJ001 RepID=B1Z950_METPB Length = 127 Score = 69.7 bits (169), Expect = 3e-11, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 25/55 (45%) Query: 75 VKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNE 129 VR++ LTQ + G + +E+G P PS L+R++ + PE Sbjct: 54 RAVREQFGLTQAAFAAWIGVPLATLRNWEQGRTSPDPSARALMRMMAREPEAARR 108 >UniRef50_C7JJ64 Transcriptional regulator Xre n=8 Tax=Acetobacter pasteurianus RepID=C7JJ64_ACEP3 Length = 99 Score = 69.7 bits (169), Expect = 3e-11, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 30/79 (37%), Gaps = 2/79 (2%) Query: 54 MAQVKAFRASVNAETVAPEFI--VKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHP 111 A A P I +RK+ L+Q + +G A +E+ P Sbjct: 17 QAVGIAAGTVKPGRIWTPPEINVADIRKRTGLSQVRFAARYGFSAAAVRDWEQKRRTPEK 76 Query: 112 STIKLLRVLDKHPELLNEI 130 + LL ++DK P+ + + Sbjct: 77 AARTLLMLIDKEPQAVERV 95 >UniRef50_B2ICD7 Transcriptional regulator, XRE family n=2 Tax=Rhizobiales RepID=B2ICD7_BEII9 Length = 92 Score = 69.3 bits (168), Expect = 3e-11, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 5/85 (5%) Query: 46 NKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKG 105 + + + F +A A I K R L L+Q E + F V +E+ Sbjct: 11 DPADIEDFDVSPEAMDRGQRARM-----IRKTRTALGLSQAEFASRFRVPVGTLRDWEQA 65 Query: 106 NAQPHPSTIKLLRVLDKHPELLNEI 130 A I +RV+ HP+L+ ++ Sbjct: 66 RATAPDFAIAYIRVIGMHPDLVAKV 90 >UniRef50_A6Q853 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q853_SULNB Length = 104 Score = 68.9 bits (167), Expect = 4e-11, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 39/87 (44%), Gaps = 4/87 (4%) Query: 48 EESDAFMAQVKAFRA----SVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYE 103 E++ AF + + ++ + I +R+K ++++ + ++E Sbjct: 15 EDAKAFEQDKLTLKTISITPKERKVLSADEIRSIREKYNMSRALFANFLHISPRTLEKWE 74 Query: 104 KGNAQPHPSTIKLLRVLDKHPELLNEI 130 G ++P+ LL + DK+P+++ + Sbjct: 75 LGTSRPNEQASTLLALTDKYPDMIERL 101 >UniRef50_A0KB55 Transcriptional regulator-like protein n=17 Tax=Burkholderiaceae RepID=A0KB55_BURCH Length = 106 Score = 68.9 bits (167), Expect = 5e-11, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 36/82 (43%) Query: 42 ESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSR 101 + + D + A PE I ++RK ++++Q + + + Sbjct: 19 SGLYRAQLIDKKTMREYDDLCIEAAPQFDPEAIARIRKSVNVSQSVFALYLNTTTSTIRQ 78 Query: 102 YEKGNAQPHPSTIKLLRVLDKH 123 +E+G+ +P ++L++++KH Sbjct: 79 WEQGDKRPSGIAARMLQIVEKH 100 >UniRef50_D2LEA3 Transcriptional regulator, XRE family n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LEA3_RHOVA Length = 127 Score = 68.9 bits (167), Expect = 5e-11, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 33/89 (37%), Gaps = 4/89 (4%) Query: 42 ESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSR 101 E + + A + + ++R L L+Q E + +G ++ Sbjct: 29 EQYFRDKLVGGDGESLSASVKKAD----FGVRVRQLRDTLGLSQAEFASRYGLDLSTLRG 84 Query: 102 YEKGNAQPHPSTIKLLRVLDKHPELLNEI 130 +E+G P + L+ ++ P L+ I Sbjct: 85 WEQGRRTPDKANRTLIEAIEVSPGLMANI 113 >UniRef50_A0S0K2 Helix-turn-helix motif protein n=1 Tax=Acinetobacter venetianus RepID=A0S0K2_9GAMM Length = 104 Score = 68.5 bits (166), Expect = 6e-11, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 33/88 (37%) Query: 42 ESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSR 101 E+ + E + + + R+K LTQ + ++I G Sbjct: 14 EATRDIEAEILQGIDDMLANNAAKRTVITETDVALARRKAQLTQDQFAKILGVSRRTLES 73 Query: 102 YEKGNAQPHPSTIKLLRVLDKHPELLNE 129 +E+G +P + L+R+ P+ + E Sbjct: 74 WEQGARRPSGAATSLIRLFIVDPKFVKE 101 >UniRef50_A1AZA3 Transcriptional regulator, XRE family n=3 Tax=Bacteria RepID=A1AZA3_PARDP Length = 97 Score = 68.5 bits (166), Expect = 6e-11, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 36/85 (42%) Query: 45 MNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEK 104 ++ A + + A P +VR + LTQ + + + G ++ + ++E+ Sbjct: 9 FGEDLIQAMGEALAHAKGEGTAILHEPVDPREVRMRAKLTQAQMAPLMGMSLSGYRKWEQ 68 Query: 105 GNAQPHPSTIKLLRVLDKHPELLNE 129 G + LLRV++K P + Sbjct: 69 GQRRVSGPAATLLRVIEKEPGAVQR 93 >UniRef50_A1U433 Helix-turn-helix domain protein n=2 Tax=Gammaproteobacteria RepID=A1U433_MARAV Length = 107 Score = 68.5 bits (166), Expect = 6e-11, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 31/65 (47%) Query: 58 KAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLL 117 ++ + PE I +R + ++Q + I V+ ++E G +P +++KLL Sbjct: 35 YEELCRTDSRELPPEEIRNIRSQTRMSQAVFAAILNVSVSTVQKWETGEKKPAGASLKLL 94 Query: 118 RVLDK 122 ++ + Sbjct: 95 NLVRR 99 >UniRef50_Q3B4L5 Transcriptional regulator, XRE family n=2 Tax=Chlorobium/Pelodictyon group RepID=Q3B4L5_PELLD Length = 100 Score = 68.5 bits (166), Expect = 6e-11, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 30/80 (37%) Query: 43 SIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRY 102 + D + + PE I ++R ++Q + I G G ++ Sbjct: 14 GLFEVGAMDEVTLREVEALGLPKKKAFKPEEIREIRISNHVSQAAFAAIIGVGKTTVQQW 73 Query: 103 EKGNAQPHPSTIKLLRVLDK 122 E+G P + +LL V+ + Sbjct: 74 EQGQKHPGGAAKRLLDVISR 93 >UniRef50_Q2IEG7 Transcriptional regulator, XRE family n=1 Tax=Anaeromyxobacter dehalogenans 2CP-C RepID=Q2IEG7_ANADE Length = 104 Score = 68.5 bits (166), Expect = 6e-11, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 35/84 (41%), Gaps = 4/84 (4%) Query: 48 EESDAFMAQVKAF----RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYE 103 E++ AF A + + + ++ VR ++ ++Q + I +E Sbjct: 19 EDAIAFHAGDRQLTVRDVELKPPAPMGAKEVLAVRTRMRVSQAAFARILNVSPRTVQAWE 78 Query: 104 KGNAQPHPSTIKLLRVLDKHPELL 127 +P + +KLL V HPE+L Sbjct: 79 TDARRPSDAALKLLAVAKAHPEVL 102 >UniRef50_A9EN56 Transcriptional Regulator, XRE family protein n=2 Tax=Phaeobacter gallaeciensis RepID=A9EN56_9RHOB Length = 120 Score = 68.1 bits (165), Expect = 8e-11, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 5/89 (5%) Query: 47 KEESDAFMAQVKAFRASVNAETVAPEFI-----VKVRKKLSLTQKEASEIFGGGVNAFSR 101 ++ A ET+A + V++RK L ++Q+ FG + + Sbjct: 27 DRDAIALQQMQDDISGKAPLETMASREVPMVDVVRLRKTLGMSQERFCSHFGFRLGSVRN 86 Query: 102 YEKGNAQPHPSTIKLLRVLDKHPELLNEI 130 +E+G P LLR+++ PE + Sbjct: 87 WEQGRRLPERPARILLRMIEDDPERVERF 115 >UniRef50_B7KUC3 Transcriptional regulator, XRE family n=6 Tax=Bacteria RepID=B7KUC3_METC4 Length = 111 Score = 68.1 bits (165), Expect = 8e-11, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 29/63 (46%) Query: 67 ETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPEL 126 + +R+ L L+Q+E + F + +E+G +P + L V+ ++P Sbjct: 43 RMPRTPQVRIIRRALGLSQEEFASRFQIPLGTLRDWEQGRKEPDAAARAYLVVIGRNPRA 102 Query: 127 LNE 129 ++E Sbjct: 103 VSE 105 >UniRef50_C1A4Y5 Putative uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A4Y5_GEMAT Length = 173 Score = 67.8 bits (164), Expect = 1e-10, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 40/118 (33%), Gaps = 4/118 (3%) Query: 6 CHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRASVN 65 C G + + G + C C ++ D+ + N Sbjct: 14 CG-GRYALQTEQVTVRLSGMAAEVT-REFYRCEKCGHEQRTIDQRDSAEKAATEQIRAAN 71 Query: 66 AETVAPEFIVKVRKKLSLTQKEASEIF-GGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 + +AP I ++R+ L LT + +E+ G +EKG + L+R L Sbjct: 72 -DLLAPRAIRQLRESLGLTVPQFAELIYGTPKGILEGWEKGRYLQNREADALIRSLAD 128 >UniRef50_B3QWV0 Transcriptional regulator, XRE family n=3 Tax=Bacteria RepID=B3QWV0_CHLT3 Length = 101 Score = 67.8 bits (164), Expect = 1e-10, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 39/85 (45%), Gaps = 5/85 (5%) Query: 38 VHCEESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVN 97 + +++ + +P+ I ++RK+ +L+Q + +F + Sbjct: 15 DLNKSGLVDDITLRNIEKL-----CLPEVKDYSPKKITEIRKRFNLSQAALASVFNISTS 69 Query: 98 AFSRYEKGNAQPHPSTIKLLRVLDK 122 ++E+GN +P ++ KLL ++++ Sbjct: 70 TVQKWEQGNKKPTGASRKLLDIMER 94 >UniRef50_Q1WR49 Putative uncharacterized protein n=1 Tax=Lactobacillus salivarius UCC118 RepID=Q1WR49_LACS1 Length = 221 Score = 67.8 bits (164), Expect = 1e-10, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 42/107 (39%), Gaps = 5/107 (4%) Query: 17 DIPYTFRGRKTVLKGIH-GLYCVHCEESIMNKEESDAFMAQVKAFRASVNAETVAPEFIV 75 + T + K +H V E + + D + R + ++ + I+ Sbjct: 24 NETVTVK--DLTFKNMHTYWKSVTTGELYLPFNDPDINLNSDYD-RYRAEKKLLSTKDII 80 Query: 76 KVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 +RKK L+ + +++ G G + S+ E G Q + LLR+ Sbjct: 81 NIRKKYKLSLRSFAKVLGIGYSTLSKIENGALQSNEH-DALLRLASD 126 >UniRef50_C2XDJ5 Prophage ps3 protein 01 n=1 Tax=Bacillus cereus F65185 RepID=C2XDJ5_BACCE Length = 352 Score = 67.8 bits (164), Expect = 1e-10, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 39/112 (34%), Gaps = 4/112 (3%) Query: 3 CPVCHQ-GEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 C C + + I G + C C + N E +D ++ + Sbjct: 8 CVHCFERTPVEHKIVKDKVELHGETIIYDAER-YECTKCGQYTDNDELTDRNYNKIYR-K 65 Query: 62 ASVNAETVAPEFIVKVRKKL-SLTQKEASEIFGGGVNAFSRYEKGNAQPHPS 112 + + E VRK+L ++ + +++ G SRYE G+ Q Sbjct: 66 YQEKKDMLKAEDFYYVRKELYQVSTRVMAKLIGWSPATISRYEHGSLQTKKH 117 >UniRef50_A5V2L1 Transcriptional regulator, XRE family n=31 Tax=Bacteria RepID=A5V2L1_SPHWW Length = 110 Score = 67.4 bits (163), Expect = 1e-10, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 32/72 (44%) Query: 51 DAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPH 110 D + E ++P I +R++ ++Q + +A S++E+G +P Sbjct: 32 DKATMREFDAFCLTPVEPLSPAEIRSLREREHVSQPVFAHYLNVRKDAVSKWERGEKKPD 91 Query: 111 PSTIKLLRVLDK 122 ++KLL ++ Sbjct: 92 GPSLKLLNLVRA 103 >UniRef50_B6IPD8 Transcriptional regulatory protein TyrR n=1 Tax=Rhodospirillum centenum SW RepID=B6IPD8_RHOCS Length = 126 Score = 67.4 bits (163), Expect = 1e-10, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 27/53 (50%) Query: 73 FIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPE 125 + +R +L L+Q + +G V ++E+G A+P L+V+ + P+ Sbjct: 58 DLKVLRARLGLSQTAFARAYGLSVWTLRQWEQGTAEPDGPARAYLKVIGQDPD 110 >UniRef50_Q6MB64 Putative uncharacterized protein n=2 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MB64_PARUW Length = 106 Score = 67.4 bits (163), Expect = 1e-10, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 30/81 (37%), Gaps = 1/81 (1%) Query: 42 ESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSR 101 E + + A+ A + I ++RKK +Q ++I Sbjct: 15 EEAFAYAQGKITLKSEIIEIPDAPADYKA-QDIKRIRKKCHYSQVVFAKILNVSPRTIQS 73 Query: 102 YEKGNAQPHPSTIKLLRVLDK 122 +E G P ++LL ++DK Sbjct: 74 WESGQRVPSHVALRLLEIVDK 94 >UniRef50_B7KUW4 Transcriptional regulator, XRE family n=3 Tax=Methylobacterium RepID=B7KUW4_METC4 Length = 97 Score = 67.4 bits (163), Expect = 2e-10, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 32/87 (36%) Query: 43 SIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRY 102 + + A A + + VR+ +L+Q + G V + Sbjct: 7 QELTRSLEQAAAHARGETVAGLQVHVPHDIDVAAVRRASALSQDAFARRIGVAVGTLRNW 66 Query: 103 EKGNAQPHPSTIKLLRVLDKHPELLNE 129 E+ +P LL +L+K+P L+ E Sbjct: 67 EQRRRRPEGPARVLLALLEKNPRLVEE 93 >UniRef50_B5ZMC0 Putative uncharacterized protein n=1 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZMC0_GLUDA Length = 175 Score = 67.0 bits (162), Expect = 2e-10, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 33/85 (38%) Query: 45 MNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEK 104 +A +V+ + A + +RK+L L++++ + +G +E Sbjct: 85 HTDTVEAVIADLGRAGIRAVHNDHRAEVDVAAIRKRLKLSRRQFALWYGLEEETIKGWES 144 Query: 105 GNAQPHPSTIKLLRVLDKHPELLNE 129 G P + LR + PE + E Sbjct: 145 GERTPDTAARSYLRAIANQPEAVRE 169 >UniRef50_B7UR20 Predicted regulatory protein n=20 Tax=Gammaproteobacteria RepID=B7UR20_ECO27 Length = 94 Score = 66.6 bits (161), Expect = 2e-10, Method: Composition-based stats. Identities = 12/82 (14%), Positives = 32/82 (39%) Query: 49 ESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQ 108 + + + + + +R++L+++Q E ++ G V+ +E Sbjct: 10 SLEEAVEIKQGLKEPARVTRYEIADVKAIREQLNVSQSEMAKALGTSVDTIKSWESKRRN 69 Query: 109 PHPSTIKLLRVLDKHPELLNEI 130 P K+L + ++P E+ Sbjct: 70 PTGLAAKVLATIKENPAFFREL 91 >UniRef50_A0LNU8 Transcriptional regulator, XRE family n=2 Tax=Proteobacteria RepID=A0LNU8_SYNFM Length = 112 Score = 66.6 bits (161), Expect = 2e-10, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 37/84 (44%) Query: 38 VHCEESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVN 97 + +++KE + + + E ++ + I +R+K ++Q + + V Sbjct: 21 DMGQAGLLDKEAYEKITMRHLGVKERAKLEPLSGDDIRALREKAHMSQAVFAHVLNLTVG 80 Query: 98 AFSRYEKGNAQPHPSTIKLLRVLD 121 S+ E+G +P + + LL V+ Sbjct: 81 YVSQLERGLKRPAGAVLALLNVIR 104 >UniRef50_Q5HXG4 Putative uncharacterized protein n=2 Tax=Alphaproteobacteria RepID=Q5HXG4_GLUOX Length = 109 Score = 66.6 bits (161), Expect = 3e-10, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 35/85 (41%), Gaps = 3/85 (3%) Query: 45 MNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEK 104 + D + +P + R+ L LTQK+ + + G V + +E+ Sbjct: 24 TTDGDIDRQAKEDGTDVELPGLAAPSPATV---RRHLKLTQKDIAALAGVPVATWRNWEQ 80 Query: 105 GNAQPHPSTIKLLRVLDKHPELLNE 129 G + P+ LLRVL + P+ + Sbjct: 81 GRVRLDPAVRTLLRVLWREPDAVRR 105 >UniRef50_A0L322 Transcriptional regulator, XRE family n=1 Tax=Shewanella sp. ANA-3 RepID=A0L322_SHESA Length = 103 Score = 66.6 bits (161), Expect = 3e-10, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 37/77 (48%) Query: 46 NKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKG 105 N M ++ A S + + E I +R++ ++Q + I + ++E+G Sbjct: 19 NGTMDQLTMRKIDALALSAKLDEMTAERIKNLREREHISQGVLATILNMSNESVQKWEQG 78 Query: 106 NAQPHPSTIKLLRVLDK 122 ++P + ++LL ++DK Sbjct: 79 KSKPQGAALRLLNMIDK 95 >UniRef50_B0T0J0 Transcriptional regulator, XRE family n=2 Tax=Alphaproteobacteria RepID=B0T0J0_CAUSK Length = 106 Score = 66.2 bits (160), Expect = 3e-10, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 29/65 (44%) Query: 66 AETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPE 125 A + +R++L +TQ + +E F + +E+ + P LL + + PE Sbjct: 36 ARFKRVNAVKDIRRRLDMTQAQFAEAFRLPLATVRDWEQERSYPDAPARALLTAIARDPE 95 Query: 126 LLNEI 130 + ++ Sbjct: 96 TMRQL 100 >UniRef50_C6N1Q6 Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N1Q6_9GAMM Length = 90 Score = 66.2 bits (160), Expect = 3e-10, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 29/59 (49%) Query: 65 NAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKH 123 E + P+ I +R K ++Q + I + + ++E+G P + +KLLR+ H Sbjct: 25 EVEELLPDEIKAMRSKEKISQSVMARILNVTTSTYQKWERGEVHPKGANLKLLRLAYDH 83 >UniRef50_C8WG12 Transcriptional regulator, XRE family n=2 Tax=Zymomonas mobilis subsp. mobilis RepID=C8WG12_ZYMMN Length = 93 Score = 66.2 bits (160), Expect = 3e-10, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 5/84 (5%) Query: 46 NKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKG 105 + + + F +A A I K R L L+QK+ + F V +E+ Sbjct: 11 DPADEEDFNVTKEAMERGQRARL-----IRKARSALGLSQKDFASRFKISVGTLRDWEQT 65 Query: 106 NAQPHPSTIKLLRVLDKHPELLNE 129 + I ++V+ HPE++ E Sbjct: 66 RSTAPDYAIAYVKVISLHPEMVAE 89 >UniRef50_Q1Q5F4 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q5F4_9BACT Length = 121 Score = 66.2 bits (160), Expect = 3e-10, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 4/67 (5%) Query: 69 VAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPH----PSTIKLLRVLDKHP 124 + + I ++R+KL TQ E ++ G + SR+E G +QP I L +++D Sbjct: 1 MGAKEIKELREKLGATQSEFAKALGISFSTVSRWESGISQPDYTQEEQLIALKQLVDNKD 60 Query: 125 ELLNEIR 131 ++R Sbjct: 61 VDQKKLR 67 >UniRef50_C0VJ40 Helix-turn-helix XRE family protein n=1 Tax=Acinetobacter sp. ATCC 27244 RepID=C0VJ40_9GAMM Length = 100 Score = 66.2 bits (160), Expect = 3e-10, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 29/57 (50%) Query: 73 FIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNE 129 + KVR+K L+Q+E + V +E P S + LLR+LD PEL+ E Sbjct: 44 DVKKVREKTYLSQEEFAARLHIDVKKLQSWESRKRSPTGSVLLLLRILDIQPELVFE 100 >UniRef50_B4B443 Transcriptional regulator, XRE family n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B443_9CHRO Length = 83 Score = 66.2 bits (160), Expect = 3e-10, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 32/63 (50%), Gaps = 5/63 (7%) Query: 74 IVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVL-----DKHPELLN 128 I +R +L +TQ++ + G +R+E G+ QP ++L+ L ++ E L Sbjct: 18 IRSIRLELGMTQEQFAAYLGVVYPTVNRWENGHTQPSLMALRLIEKLLIDLGERGQEFLQ 77 Query: 129 EIR 131 +++ Sbjct: 78 QLQ 80 >UniRef50_B4SDH0 Transcriptional regulator, XRE family n=1 Tax=Pelodictyon phaeoclathratiforme BU-1 RepID=B4SDH0_PELPB Length = 96 Score = 65.8 bits (159), Expect = 4e-10, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 35/88 (39%), Gaps = 2/88 (2%) Query: 41 EESIMNK--EESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNA 98 EE + ++ + + + + + VR+++ L+Q E + + V Sbjct: 2 EEILFSELLKSLKEANDIAEGMSEASRRFEITLPDVQSVREQIGLSQDEFASMMRVSVRT 61 Query: 99 FSRYEKGNAQPHPSTIKLLRVLDKHPEL 126 +EK P S LL+++ P++ Sbjct: 62 LQNWEKHRRNPTGSAAALLKIVVAAPDV 89 >UniRef50_B7QUY4 Putative uncharacterized protein n=1 Tax=Ruegeria sp. R11 RepID=B7QUY4_9RHOB Length = 122 Score = 65.8 bits (159), Expect = 4e-10, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 29/58 (50%) Query: 73 FIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEI 130 +V++RK L ++Q+ FG + + +E+G P LLR+++ PE + Sbjct: 60 DVVRLRKSLGMSQERFCSHFGFRLGSVRNWEQGRRLPERPARILLRMIEDDPERVERF 117 >UniRef50_Q2G4Q6 Transcriptional regulator, XRE family n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2G4Q6_NOVAD Length = 166 Score = 65.4 bits (158), Expect = 5e-10, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 44/104 (42%), Gaps = 1/104 (0%) Query: 18 IPYTFRGRKTV-LKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVK 76 P +RG + +G + + + +V A + + +T+AP+ I Sbjct: 18 EPLLYRGCGLDGIYLCNGYEIEEIDGETFTYVQDREGLHKVIALNLAEHRKTLAPKEIRF 77 Query: 77 VRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVL 120 +R + TQ +++ G +R+EKG + ++LRV+ Sbjct: 78 MRVAIDHTQSSLAKVLGVSSQTVARWEKGQVEIPGPADRMLRVM 121 >UniRef50_D1Y8M5 Helix-turn-helix domain protein n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y8M5_9BACT Length = 99 Score = 65.4 bits (158), Expect = 6e-10, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 2/66 (3%) Query: 56 QVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIK 115 Q++A R+ V AP+ I +R +Q + + ++ ++E G +P ++ K Sbjct: 28 QIEALRSEVPT--YAPDKIKALRASTKFSQTAFASLLNVSLSTVQKWEAGVKKPDGASRK 85 Query: 116 LLRVLD 121 LL +L+ Sbjct: 86 LLHLLE 91 >UniRef50_B6JDP2 Transcriptional regulator of XRE family n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JDP2_OLICO Length = 117 Score = 65.1 bits (157), Expect = 7e-10, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 36/80 (45%), Gaps = 2/80 (2%) Query: 45 MNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEK 104 + ++ +A+ + V + + +R++L++TQ++ S G V +E+ Sbjct: 26 TDDDDIARQIAEDEDTAPEVTLDMLIAP--ANLRRRLNMTQEQFSLALGVPVATLRNWEQ 83 Query: 105 GNAQPHPSTIKLLRVLDKHP 124 G P+ LL ++ + P Sbjct: 84 GRNAIDPAARSLLLLVARDP 103 >UniRef50_C2LEY4 Regulatory protein n=4 Tax=Enterobacteriaceae RepID=C2LEY4_PROMI Length = 106 Score = 65.1 bits (157), Expect = 7e-10, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 42/85 (49%), Gaps = 3/85 (3%) Query: 41 EESIMNKEESDAFMAQVKAFRASVNAETVAP---EFIVKVRKKLSLTQKEASEIFGGGVN 97 + + + + A++KA + P E I ++R++ +++Q + I Sbjct: 17 DAGVTDGSTTKRIAARIKAKELQAKYKHPTPMTGEDIKRIREQNNISQSSLALILNMTKE 76 Query: 98 AFSRYEKGNAQPHPSTIKLLRVLDK 122 + S++E+ +P+ + ++LL ++DK Sbjct: 77 SVSKWERNEIKPNGAALRLLHLIDK 101 >UniRef50_Q1NRF9 Virulence gene repressor RsaL n=9 Tax=Proteobacteria RepID=Q1NRF9_9DELT Length = 104 Score = 65.1 bits (157), Expect = 7e-10, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 42/90 (46%), Gaps = 1/90 (1%) Query: 42 ESIMNKEESDAFMAQVKAFRASVN-AETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFS 100 E E ++ + + A ++ + ++ +R++L L++ + + Sbjct: 12 EGFDALAEERTGKRTLRTYDVELKLAPEISADEVIALRERLHLSRSVFARYLRTNLRTLE 71 Query: 101 RYEKGNAQPHPSTIKLLRVLDKHPELLNEI 130 +E+G A+P+ LLR++ ++P+ ++ + Sbjct: 72 NWEQGRAKPNAQAALLLRLVQRYPDTVDRL 101 >UniRef50_C8Q2C3 Transcriptional regulator, XRE family n=1 Tax=Pantoea sp. At-9b RepID=C8Q2C3_9ENTR Length = 109 Score = 64.7 bits (156), Expect = 9e-10, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 43/91 (47%), Gaps = 4/91 (4%) Query: 43 SIMNKEESDAFMAQVK--AFRASVNA-ETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAF 99 +++ + A+V+ RAS+ E + E I +R + L+Q + V Sbjct: 19 GVISDDLVKHIDARVQLRELRASLPVIEEMNGEAIRSLRDRFHLSQAMLALYVNMSVVTV 78 Query: 100 SRYEKGNAQPHPSTIKLLR-VLDKHPELLNE 129 S++E+G +P+ + +++L + K P++ Sbjct: 79 SKWERGEKKPNGAALRVLNTMAIKGPDVFAI 109 >UniRef50_A8HTF6 Putative transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8HTF6_AZOC5 Length = 301 Score = 64.7 bits (156), Expect = 9e-10, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 24/57 (42%), Gaps = 2/57 (3%) Query: 65 NAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 I ++RK L + Q E + G + S++E QP + LL++ + Sbjct: 57 RGMPNYARRIREIRKNLGMNQAEFAAALGVSQGSVSKWEAAKEQPRTTA--LLKIAE 111 >UniRef50_A0B4W6 Transcriptional regulator, XRE family n=3 Tax=Burkholderia RepID=A0B4W6_BURCH Length = 240 Score = 64.7 bits (156), Expect = 9e-10, Method: Composition-based stats. Identities = 23/129 (17%), Positives = 43/129 (33%), Gaps = 22/129 (17%) Query: 1 MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESI-MNKEESDAFMAQVKA 59 ++C C + T+ G + C C E+ + +ES+A Sbjct: 12 IRCGACG---YRGDTRRPDGTYHGEAVL--------CPRCGEATGLEWDESEALAGLTPG 60 Query: 60 F----------RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQP 109 F R + E + ++R + TQ + + G R+E G Sbjct: 61 FAGDPLGPGATRPADKGPAPTAEALRQLRLRHGRTQVDVAACVGVTERQVQRWEAGQGSM 120 Query: 110 HPSTIKLLR 118 ++ +LLR Sbjct: 121 PIASWQLLR 129 >UniRef50_Q1NR99 Helix-turn-helix motif n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NR99_9DELT Length = 107 Score = 64.3 bits (155), Expect = 1e-09, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 24/47 (51%) Query: 81 LSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELL 127 L L+Q E SE V +E+G P + LL+VLDK PE L Sbjct: 60 LGLSQVEFSERIDVSVGTIRNWEQGKHCPTGAAKTLLKVLDKTPEAL 106 >UniRef50_C1D7U6 Virulence gene repressor RsaL n=6 Tax=Proteobacteria RepID=C1D7U6_LARHH Length = 103 Score = 64.3 bits (155), Expect = 1e-09, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 43/89 (48%), Gaps = 2/89 (2%) Query: 42 ESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSR 101 +++ ++ E + Q A R V+ + ++ +R +L L++ + Sbjct: 14 DALRDEREGKVTLRQHTAERKEAPT--VSAQEVLALRTRLHLSRPVFARYLRTNERTLEN 71 Query: 102 YEKGNAQPHPSTIKLLRVLDKHPELLNEI 130 +E+G A+P+ L+R+++++P+ + + Sbjct: 72 WEQGRAKPNAQAALLIRMVERYPDTVQRL 100 >UniRef50_A4SL74 Transcriptional regulator, XRE family n=15 Tax=Gammaproteobacteria RepID=A4SL74_AERS4 Length = 94 Score = 63.9 bits (154), Expect = 1e-09, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 34/84 (40%) Query: 47 KEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGN 106 K + + + + +R L+++Q+E ++ G V+ +E Sbjct: 8 KASLEEAVEIKQGLLEPAARTRYEVADVKAIRLALNVSQQEFAQALGTSVDTVKSWETRR 67 Query: 107 AQPHPSTIKLLRVLDKHPELLNEI 130 P K+L ++ + P+L +E+ Sbjct: 68 RNPTGLAAKVLTLMQEKPDLYSEL 91 >UniRef50_UPI000197C515 hypothetical protein PretD1_18434 n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197C515 Length = 109 Score = 63.9 bits (154), Expect = 1e-09, Method: Composition-based stats. Identities = 11/61 (18%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Query: 68 TVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD-KHPEL 126 ++ I ++R + ++Q + G + S++E+ +P +++L +++ + PE+ Sbjct: 47 MMSGAQIKQLRAQYGMSQAMLALALGMSKESVSKWEREEKKPSGPALRMLHLIEQRGPEI 106 Query: 127 L 127 L Sbjct: 107 L 107 >UniRef50_B7UKA8 Predicted protein n=15 Tax=Enterobacteriaceae RepID=B7UKA8_ECO27 Length = 98 Score = 63.9 bits (154), Expect = 2e-09, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 32/68 (47%) Query: 64 VNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKH 123 + T + + +R+ L Q++ + G + +E QP + KLL +L + Sbjct: 29 EHVHTFSEIDVKAIREATGLRQQDFAVAVGVSYDLVKSWETKRRQPTGAPRKLLLLLQAN 88 Query: 124 PELLNEIR 131 P ++N+++ Sbjct: 89 PFIINQLK 96 >UniRef50_C7BSN7 Putative uncharacterized protein n=1 Tax=Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949 RepID=C7BSN7_PHOAA Length = 108 Score = 63.5 bits (153), Expect = 2e-09, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 29/56 (51%) Query: 67 ETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 + + E I K+R+ +++Q + N+ ++E+ P + +KLL +++K Sbjct: 46 DVMTGERIRKIREYYNISQGALATAINMSANSVQKWERDETHPTGAALKLLMIIEK 101 >UniRef50_A4VWF1 Putative uncharacterized protein n=8 Tax=Lactobacillales RepID=A4VWF1_STRSY Length = 178 Score = 63.5 bits (153), Expect = 2e-09, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 21/55 (38%) Query: 63 SVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLL 117 E + I +RKK LTQ++ + A S +E P + L+ Sbjct: 16 RKEKEMNFGQQIKDLRKKKGLTQEQFALKLNVTRQAVSNWENDKNLPDLELLILM 70 >UniRef50_C0CY08 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CY08_9CLOT Length = 179 Score = 62.7 bits (151), Expect = 4e-09, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 27/50 (54%) Query: 68 TVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLL 117 E + ++RK+ L+Q++ +E+ A S++E+G P T+ LL Sbjct: 1 MSFAEHLRQIRKEKGLSQEDLAELLDVSRQAVSKWEQGAGYPEVETLLLL 50 >UniRef50_B0A9T9 Putative uncharacterized protein n=3 Tax=Firmicutes RepID=B0A9T9_9CLOT Length = 139 Score = 62.7 bits (151), Expect = 4e-09, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Query: 71 PEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEI 130 E + ++RK L+Q+E + S++EKG + P L+++ D ++E+ Sbjct: 3 NENLKQLRKSKGLSQEELAIRLNVVRQTISKWEKGLSVPD--ADMLIKIADIFEVSVSEL 60 >UniRef50_Q6FBH4 Putative uncharacterized protein n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6FBH4_ACIAD Length = 85 Score = 62.4 bits (150), Expect = 4e-09, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 24/49 (48%) Query: 71 PEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRV 119 +V++R+ L+++Q + + G +E+G P S L+R+ Sbjct: 24 SHHMVRIRRALNISQAQLASKLGISARTLESWERGVRHPSSSAQALIRL 72 >UniRef50_C8WL78 Transcriptional regulator, XRE family n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WL78_EGGLE Length = 189 Score = 62.4 bits (150), Expect = 4e-09, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 70 APEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNE 129 + I ++R+K LTQ+ + + G G + RYE G P + L+R D +P + + Sbjct: 6 TAQDIKRIRRKYGLTQQGFARLLGLGEASVVRYENGQT-PSKANANLIRAAD-NPAFMRD 63 >UniRef50_B2J239 Transcriptional regulator, XRE family n=3 Tax=Cyanobacteria RepID=B2J239_NOSP7 Length = 84 Score = 62.4 bits (150), Expect = 5e-09, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 28/56 (50%) Query: 63 SVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLR 118 + + I ++R++L L+Q++ + G + +R+E G+ P +KL+ Sbjct: 2 ELKKPLKISDLIRELRQQLDLSQEKFAAKLGVSLRTVNRWENGSTVPSQMALKLIE 57 >UniRef50_C6XH36 Putative uncharacterized protein n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XH36_LIBAP Length = 205 Score = 62.4 bits (150), Expect = 5e-09, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 32/85 (37%), Gaps = 3/85 (3%) Query: 44 IMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYE 103 I + E D V + + +RK ++Q E ++ G + S YE Sbjct: 90 IYDGEVIDRRYEDVTNKKRLDPYAI--GARLKSIRKDKGMSQIEFGKLLGMPNSTLSNYE 147 Query: 104 KGNAQPH-PSTIKLLRVLDKHPELL 127 +G P K+ +V KH + + Sbjct: 148 QGRTIPEIKPARKIKQVTKKHLDWI 172 >UniRef50_A8STQ9 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8STQ9_9FIRM Length = 172 Score = 62.0 bits (149), Expect = 5e-09, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 2/78 (2%) Query: 53 FMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPS 112 + Q + + + + F+ K+RK+ +TQ+E + FG + SR+E GN P + Sbjct: 2 YDNQQRKEKTEMIDQVKIGNFLRKLRKEKGMTQEEIATKFGVSSRSVSRWENGNTMPDLA 61 Query: 113 TIKLLRVLDKHPELLNEI 130 L+ + D + + EI Sbjct: 62 I--LVELADYYDVDIREI 77 >UniRef50_C7H8I0 SOS-response transcriptional repressor n=4 Tax=Ruminococcaceae RepID=C7H8I0_9FIRM Length = 209 Score = 62.0 bits (149), Expect = 5e-09, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%) Query: 68 TVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHP-STIKLLRVLDKHPEL 126 PE + + RK+ ++Q E + + G A ++E G + P P + KL +LD + Sbjct: 1 MSFPELLRQCRKQKHMSQAELASLLGVTQQAVGKWESGKSSPDPTTVAKLAEILDTTADY 60 Query: 127 L 127 L Sbjct: 61 L 61 >UniRef50_B8HYF2 Transcriptional regulator, XRE family n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HYF2_CYAP4 Length = 239 Score = 62.0 bits (149), Expect = 5e-09, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 34/105 (32%), Gaps = 16/105 (15%) Query: 27 TVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAF-------------RASVNAETVAPEF 73 K + C N V+ +V E Sbjct: 112 VTFKTVISWEKERC---QPNPRLMAQIERLVQQLGDRGTDLLQLYFPHPTVPTEPSTARL 168 Query: 74 IVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLR 118 + +R++L LTQ + + G + SR+EKG +P + L++ Sbjct: 169 LQTLRQRLGLTQSQFAATLGVTLMTISRWEKGRGKPKRRFMPLIK 213 Score = 52.7 bits (125), Expect = 3e-06, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 60 FRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQP-HPSTIKLLR 118 +A + E I+ +R++ T++E ++ G + +E+G QP S + L + Sbjct: 2 LQALPSYTNFWAELILTLRQRTGWTKEEFAQRLGVSLQTIINWEQGKCQPMSRSILSLQQ 61 Query: 119 VLD 121 ++ Sbjct: 62 LMQ 64 Score = 48.1 bits (113), Expect = 8e-05, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 40/83 (48%), Gaps = 7/83 (8%) Query: 48 EESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNA 107 E+++ ++ + +A++ E I+ +R ++ L+Q E + + G +EK Sbjct: 67 EDAEDLLSAYFS-QATLGQEPSLAHLILTLRHRMGLSQVEFAALLGVTFKTVISWEKERC 125 Query: 108 QPHPSTIKLLRVLDKHPELLNEI 130 QP+P R++ + L+ ++ Sbjct: 126 QPNP------RLMAQIERLVQQL 142 >UniRef50_C0VMX9 Possible transcriptional regulator n=1 Tax=Acinetobacter sp. ATCC 27244 RepID=C0VMX9_9GAMM Length = 149 Score = 62.0 bits (149), Expect = 5e-09, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 35/74 (47%) Query: 49 ESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQ 108 E + +V + ++ + +RK+++L+Q +EI G ++ +E ++ Sbjct: 32 EDVEGLHRVIGINLVTHKPRLSGAEVRFLRKEMNLSQNGLAEILGVSESSVRAWETHRSK 91 Query: 109 PHPSTIKLLRVLDK 122 + +LLRV+ K Sbjct: 92 IPKPSDRLLRVMYK 105 >UniRef50_A6DKJ3 Transcriptional regulator-like protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DKJ3_9BACT Length = 105 Score = 62.0 bits (149), Expect = 6e-09, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 34/75 (45%) Query: 49 ESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQ 108 + + M P I+++RK L ++Q+ + + G S++E+G +Q Sbjct: 25 DYEKMMKLTARDVKIPEPVKFTPSKIIQLRKSLRVSQQVFANVVGVTSGTVSKWERGESQ 84 Query: 109 PHPSTIKLLRVLDKH 123 P + L+VL+K Sbjct: 85 PEKVACRFLKVLEKE 99 >UniRef50_A0YQ49 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YQ49_9CYAN Length = 84 Score = 62.0 bits (149), Expect = 6e-09, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 34/73 (46%), Gaps = 3/73 (4%) Query: 61 RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPH---PSTIKLL 117 + + E V + K+R +L ++Q+E + G SR+E G+ P P L Sbjct: 3 QRRPSREGVGESPLKKLRDELGMSQEELARQLGISSRTVSRWEAGDNVPTFTIPQIKALA 62 Query: 118 RVLDKHPELLNEI 130 R+L+ + + ++ Sbjct: 63 RLLESKGKTIEDL 75 >UniRef50_C9L3X9 Toxin-antitoxin system, antitoxin component, Xre family n=2 Tax=Clostridiales RepID=C9L3X9_RUMHA Length = 215 Score = 61.6 bits (148), Expect = 7e-09, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 6/62 (9%) Query: 68 TVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELL 127 E I +RKK L+Q + + +F S +E G + P L ++ K + Sbjct: 1 MNIGEQINNLRKKHGLSQDDFANLFNVSRQTVSNWENGKSYPD------LEMIIKISDYF 54 Query: 128 NE 129 Sbjct: 55 KI 56 >UniRef50_B4W2P1 Helix-turn-helix domain protein n=2 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4W2P1_9CYAN Length = 165 Score = 61.6 bits (148), Expect = 7e-09, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 28/62 (45%) Query: 61 RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVL 120 + + E I +R+ + LTQ E ++ G S +E G +P ST K L ++ Sbjct: 90 QRVGDTVLWNAELIKALRRHMGLTQAEFAQRMGVRQKTVSNWEIGLYEPPLSTSKHLELV 149 Query: 121 DK 122 + Sbjct: 150 AQ 151 >UniRef50_C7H5C0 Putative prophage ps3 protein 01 n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H5C0_9FIRM Length = 340 Score = 61.6 bits (148), Expect = 7e-09, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 41/129 (31%), Gaps = 4/129 (3%) Query: 3 CPVCH-QGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 C C + I T R ++ I +C C + D + ++ Sbjct: 17 CTECRRETSYTLRKIKINQTIREKEYTF-EITAAFCNECGGEMGIPGLMDYNVKEMDEQY 75 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 E + E I ++ K ++ + S G G +RY G + +L L Sbjct: 76 RKAE-EIITVEDIERLMKLYNIGKAPLSLALGFGEVTITRYLAGQVPSKEYSDIMLHALA 134 Query: 122 KHPELLNEI 130 + E+ Sbjct: 135 SA-SYMKEL 142 >UniRef50_A9BTE8 Transcriptional regulator, XRE family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BTE8_DELAS Length = 214 Score = 61.6 bits (148), Expect = 8e-09, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 32/75 (42%), Gaps = 3/75 (4%) Query: 44 IMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYE 103 + + + F +V F ++ + + + RK+L L+Q+ + + G N S YE Sbjct: 2 LQDAVDFAQFFGKVNRFTKKMDE---FSQRLREERKRLGLSQEAFASLGGVSKNTQSNYE 58 Query: 104 KGNAQPHPSTIKLLR 118 G P + +R Sbjct: 59 TGANLPDVGYLNTIR 73 >UniRef50_B5W498 Transcriptional regulator, XRE family n=2 Tax=Arthrospira RepID=B5W498_SPIMA Length = 150 Score = 61.6 bits (148), Expect = 8e-09, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 33/68 (48%) Query: 64 VNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKH 123 P+ + ++R L L+Q E ++ G +R+E G++QP +I L++ Sbjct: 10 EKNLQDIPQLLRQLRGDLELSQAEMAQFLGVSAQTINRWENGHSQPSAISINLMQHKLSS 69 Query: 124 PELLNEIR 131 + L +I+ Sbjct: 70 LDSLKDIK 77 >UniRef50_C8WKY9 Transcriptional regulator, XRE family n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WKY9_EGGLE Length = 141 Score = 61.2 bits (147), Expect = 1e-08, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 38/107 (35%), Gaps = 14/107 (13%) Query: 22 FRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKL 81 ++G + G C + S+ A + E + ++RK Sbjct: 6 YKGAYST-----GYACDM-------GKSSEKNTPAYHDPLVQQYAFILG-ENLRQLRKAQ 52 Query: 82 SLTQKEASEIFGGGVNAFSRYEKGNAQPHPS-TIKLLRVLDKHPELL 127 LTQ+ + G G + S E+G P IKL R L+ P L Sbjct: 53 GLTQERLGLMIGTGHSRISNIERGRVVPSVPDMIKLCRALEADPVEL 99 >UniRef50_C8PQ89 Transcriptional regulator, XRE family n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PQ89_9SPIO Length = 104 Score = 61.2 bits (147), Expect = 1e-08, Method: Composition-based stats. Identities = 11/62 (17%), Positives = 24/62 (38%) Query: 61 RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVL 120 + I +R + +TQ + G + +EKG +P + +L+ +L Sbjct: 30 YEIQPIKKYNNIEIKHIRNSVGMTQVLFANYMGVSLKTVEAWEKGTNRPTGTACRLISML 89 Query: 121 DK 122 + Sbjct: 90 EN 91 >UniRef50_B1ZSG3 Transcriptional regulator, XRE family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZSG3_OPITP Length = 181 Score = 61.2 bits (147), Expect = 1e-08, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 1/80 (1%) Query: 41 EESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFS 100 +E I + ++A +A + P+ + +R++L LTQK ++ G +++ Sbjct: 40 DEDIGVWTLTAEAEELIEATKARHMGLLL-PDQLRTLRERLGLTQKAIGDLLQIGAKSWT 98 Query: 101 RYEKGNAQPHPSTIKLLRVL 120 R+E G +P S LLR + Sbjct: 99 RWETGTQRPSRSLNLLLRAV 118 >UniRef50_C8WMU4 Transcriptional regulator, XRE family n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WMU4_EGGLE Length = 64 Score = 60.8 bits (146), Expect = 1e-08, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 21/48 (43%) Query: 68 TVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIK 115 E + RK+LS+TQ E ++ G +R+E G P K Sbjct: 1 MTFGEMVKYARKQLSMTQTELAKALGVSFATVNRWENGQVNPSSLAQK 48 >UniRef50_Q3M3V5 Transcriptional regulator, XRE family n=3 Tax=Bacteria RepID=Q3M3V5_ANAVT Length = 82 Score = 60.8 bits (146), Expect = 1e-08, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 31/66 (46%) Query: 57 VKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKL 116 + + + + +FI ++R + LTQ+E + I G +R+E G+ +P I+ Sbjct: 1 MSRQKKIIFEQPKIGQFIQEIRLVMGLTQEEFAVILGVTFPTVNRWENGHTKPSKLAIQQ 60 Query: 117 LRVLDK 122 + L Sbjct: 61 IEALLD 66 >UniRef50_C5ESI5 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ESI5_9FIRM Length = 73 Score = 60.8 bits (146), Expect = 1e-08, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 25/51 (49%) Query: 68 TVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLR 118 I +R K ++Q E +E G +R+E G ++P+ T+KL+ Sbjct: 1 MSFSNDIKMIRHKCLMSQTEFAEALGVSFATVNRWESGRSKPNFKTMKLIN 51 >UniRef50_P0A9V7 Uncharacterized HTH-type transcriptional regulator yiaG n=106 Tax=Enterobacteriaceae RepID=YIAG_ECO57 Length = 96 Score = 60.8 bits (146), Expect = 1e-08, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 37/82 (45%) Query: 49 ESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQ 108 + + + + + ++ T + I ++RK L + + + G V +E + Sbjct: 13 SLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVK 72 Query: 109 PHPSTIKLLRVLDKHPELLNEI 130 P + +KL+R++ +P L ++ Sbjct: 73 PSSAELKLMRLIQANPALSKQL 94 >UniRef50_C6VMP8 Transcription regulator n=4 Tax=Lactobacillus plantarum RepID=C6VMP8_LACPJ Length = 195 Score = 60.8 bits (146), Expect = 1e-08, Method: Composition-based stats. Identities = 9/71 (12%), Positives = 31/71 (43%) Query: 60 FRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRV 119 + V + ++R+ ++Q + +++ V +E+ + QP + ++L+++ Sbjct: 41 IVSEVMKMKTTATILKEIRQHYQISQAKLAKLLNTSVRTVQHWEQADYQPSGTAVRLIQI 100 Query: 120 LDKHPELLNEI 130 L + + Sbjct: 101 LATDDAVYTAL 111 >UniRef50_A8RCT6 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RCT6_9FIRM Length = 110 Score = 60.4 bits (145), Expect = 1e-08, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 60 FRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPH-PSTIKLLR 118 ++ + + E + VRK+ L+Q ++ G S +E G ++P+ + KL Sbjct: 3 LKSIIRKIIMFNEKLKAVRKQKGLSQAALGKLLGVQTQTISNWENGKSEPNLKTINKLCE 62 Query: 119 VLD 121 LD Sbjct: 63 ALD 65 >UniRef50_A1WQC3 Transcriptional regulator, XRE family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WQC3_VEREI Length = 96 Score = 60.4 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 30/83 (36%), Gaps = 3/83 (3%) Query: 45 MNKEESDAFMAQVKAFR---ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSR 101 + + V + V + +R +L ++Q+ + + + Sbjct: 5 FGDDLIEGLNQAVAHAKGQSKDARVHVVHVPNVRSLRARLKMSQQLFASTYHIPLATLKG 64 Query: 102 YEKGNAQPHPSTIKLLRVLDKHP 124 +E+G QP + L V++K P Sbjct: 65 WEQGRRQPDATAAAYLSVIEKMP 87 >UniRef50_B8HJX4 Transcriptional regulator, XRE family n=2 Tax=Cyanothece sp. PCC 7425 RepID=B8HJX4_CYAP4 Length = 99 Score = 60.4 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 26/50 (52%) Query: 66 AETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIK 115 A+ I ++R+ + LTQ++ + + G +R+E + QP P +K Sbjct: 17 AQPQISHLIRQIRQGMGLTQEQFAMVLGVTYTTVNRWENAHMQPSPLALK 66 >UniRef50_UPI0001A43291 hypothetical protein PcarcW_16193 n=2 Tax=Pectobacterium carotovorum RepID=UPI0001A43291 Length = 109 Score = 60.4 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 36/80 (45%), Gaps = 3/80 (3%) Query: 45 MNKEESDAFMAQVKA--FRASVN-AETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSR 101 + + +V A FR + A ++ I +R + ++Q + V + S+ Sbjct: 21 ITDTTMERINNRVAAREFRERIEQAHAMSGAEIQNMRSRYKMSQSSLAYALNMSVESVSK 80 Query: 102 YEKGNAQPHPSTIKLLRVLD 121 +E+ +P + ++LL +++ Sbjct: 81 WERNEKKPSGAALRLLNIIN 100 >UniRef50_C9A4E1 Predicted protein n=3 Tax=Enterococcus casseliflavus RepID=C9A4E1_ENTCA Length = 207 Score = 60.4 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 2/63 (3%) Query: 68 TVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELL 127 + I + RK+L +TQ+E ++ +A S +E G P L+ + + L Sbjct: 1 MAFHQMIRERRKQLGMTQEELAKELNVSRSAISNWEIGRNYPD--ITTLIELAQMYQVSL 58 Query: 128 NEI 130 +E+ Sbjct: 59 DEL 61 >UniRef50_C7N0U4 Predicted transcriptional regulator n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N0U4_SLAHD Length = 459 Score = 60.4 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Query: 72 EFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEI 130 E + ++R+ L+Q+E + G A S++E+ + P T L+ + + L+E+ Sbjct: 7 ERLAELRRAKGLSQEELAHELGLSRQAVSKWERAESSPD--TDNLIALAKLYGMTLDEL 63 >UniRef50_C7N2T6 Predicted transcriptional regulator n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N2T6_SLAHD Length = 272 Score = 60.4 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 26/56 (46%) Query: 71 PEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPEL 126 E I RK+ LTQ++ + A SR+E G ++P KLL + P + Sbjct: 4 SEAIQNARKEAGLTQEQLAAKVYVTRQAVSRWETGESEPSIDMRKLLASVLGVPAV 59 >UniRef50_B6WXX6 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WXX6_9DELT Length = 183 Score = 60.4 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 26/55 (47%) Query: 64 VNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLR 118 + I++ RK + +TQ+E + G + +++E G + P + LLR Sbjct: 6 TEGRIRLGQEILRRRKAMGMTQEELASRMGVSRQSVAKWETGQSSPDIDRLSLLR 60 >UniRef50_A6LU60 Prophage ps3 protein 01, putative n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LU60_CLOB8 Length = 336 Score = 60.4 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 39/121 (32%), Gaps = 3/121 (2%) Query: 3 CPVCHQGEMVSGIKDIPYTF-RGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 C C K + + + K C C I + + + + Sbjct: 7 CEYCFSEREYQVYKVRRTSILKEEEVSYKAKEA-VCNVCGNEIFVSDICEYNLMNLYKEY 65 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 N ++ + I KV+ K S+ + S I G RY G+ ++ L +V + Sbjct: 66 RR-NYNIISTDEIEKVKIKYSINSEALSLILGWNSKTIERYLDGDMIGVSNSDLLRKVYE 124 Query: 122 K 122 Sbjct: 125 N 125 >UniRef50_Q12J32 Transciptional regulator n=10 Tax=Shewanella RepID=Q12J32_SHEDO Length = 229 Score = 60.4 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Query: 69 VAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTI-KLLRVLDKHPELL 127 + E I + RK+L LTQ ++ G S +E G+ P + L + L PE L Sbjct: 1 MMNERIKQRRKELGLTQPSIAKTIGLTKATISLWESGSTSPKGENLHALAKALRCAPEFL 60 >UniRef50_A8ZRN8 N-6 DNA methylase n=14 Tax=cellular organisms RepID=A8ZRN8_DEIGD Length = 610 Score = 60.4 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 26/60 (43%) Query: 64 VNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKH 123 + P + +R L LTQ++ +E G +R+E G +P + + + L + Sbjct: 4 MPPPIDFPALLRTIRSALDLTQEQLAERLGVSFATVNRWEGGGNKPQRAAQETILALARE 63 >UniRef50_C6JC03 Transcriptional regulator n=9 Tax=Clostridiales RepID=C6JC03_9FIRM Length = 313 Score = 60.4 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 2/57 (3%) Query: 74 IVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEI 130 + + RK+ +LTQ++ +E FG SR+E G P S L+++ + + + E+ Sbjct: 10 LKQCRKEKNLTQEQLAEKFGVSARTVSRWETGINMPDLSI--LVQLAEYYDVEMREL 64 >UniRef50_Q2G3X3 Putative prophage repressor n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2G3X3_NOVAD Length = 227 Score = 60.4 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 2/68 (2%) Query: 54 MAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPST 113 MA F + + E + +RK+ LTQ + +E G R+E+G +P Sbjct: 1 MAVPLKFASGQDIPMGYLERLAALRKRKGLTQVDLAERMGVEQPTIQRWERGQREPK--F 58 Query: 114 IKLLRVLD 121 +L R+ + Sbjct: 59 EQLFRLAE 66 >UniRef50_C0C2T3 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2T3_9CLOT Length = 262 Score = 60.0 bits (144), Expect = 2e-08, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 29/61 (47%) Query: 55 AQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTI 114 A F A+ E + K+RK +LTQ++ +EI A S++E G P ++ Sbjct: 49 ADKLTFGEEGMAKLEFNEKLQKLRKSKNLTQEQLAEILSVSRTAISKWESGRGYPSIDSL 108 Query: 115 K 115 K Sbjct: 109 K 109 >UniRef50_Q1NQ27 Helix-turn-helix motif n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NQ27_9DELT Length = 109 Score = 60.0 bits (144), Expect = 2e-08, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Query: 68 TVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTI-KLLRVLDKHPEL 126 + I R+ L L+Q+E + G A R+E+G P T+ +LL +L+ + Sbjct: 1 MNVGQRIRSRRQVLGLSQRELAARLGITFQAIQRWERGETFPRKETLPQLLAILEVGADW 60 Query: 127 L 127 L Sbjct: 61 L 61 >UniRef50_B6GBG4 Putative uncharacterized protein n=2 Tax=Collinsella RepID=B6GBG4_9ACTN Length = 320 Score = 60.0 bits (144), Expect = 2e-08, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 32/68 (47%), Gaps = 2/68 (2%) Query: 63 SVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 + ++ +R ++TQ++ + + G A S++E G + P +L+R+ + Sbjct: 4 KERDTMSFRDNLLYLRDARNMTQEQLAMLLGVTRQAVSKWESGASTPD--MDRLVRLCEI 61 Query: 123 HPELLNEI 130 L+++ Sbjct: 62 FEVDLDDL 69 >UniRef50_B4B219 Transcriptional regulator, XRE family n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B219_9CHRO Length = 129 Score = 60.0 bits (144), Expect = 2e-08, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 26/70 (37%), Gaps = 2/70 (2%) Query: 63 SVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPH--PSTIKLLRVL 120 + VR L LTQ+ ++ G SR+E G P +KL ++L Sbjct: 53 QQPTVNFKKLQLKDVRNLLGLTQESFAQALGVKRETVSRWENGKDDPEFLEPAVKLYKLL 112 Query: 121 DKHPELLNEI 130 + ++ Sbjct: 113 QEINRSFEDL 122 >UniRef50_B2I5D4 Transcriptional regulator, XRE family n=8 Tax=Xylella fastidiosa RepID=B2I5D4_XYLF2 Length = 110 Score = 59.7 bits (143), Expect = 3e-08, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 26/53 (49%) Query: 70 APEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 + I +RK+L L+Q E + G + +E+G A + K++RVL Sbjct: 53 SGAEIRFMRKELELSQPEFAACLGTTTQTLAAWEEGRAALPDAADKMIRVLIN 105 >UniRef50_A0YJB7 Putative uncharacterized protein n=4 Tax=Lyngbya sp. PCC 8106 RepID=A0YJB7_9CYAN Length = 92 Score = 59.7 bits (143), Expect = 3e-08, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 26/45 (57%) Query: 74 IVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLR 118 I+ +RK+L L+Q++ + G +R+E+G QP ++ ++ Sbjct: 16 ILTLRKRLGLSQEKLATQLGVSFQTVNRWERGRTQPSHLALQAIK 60 >UniRef50_B1I2S9 Helix-turn-helix domain protein n=3 Tax=Clostridia RepID=B1I2S9_DESAP Length = 123 Score = 59.7 bits (143), Expect = 3e-08, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 30/64 (46%), Gaps = 2/64 (3%) Query: 67 ETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPEL 126 E + ++R ++ L Q + + + G + + +E+G QP L+++ + Sbjct: 1 MNRFGETLKRLRHRMGLRQNDVAGMLGVERSTVANWERGVKQPS--LDTLIKLSETFGVS 58 Query: 127 LNEI 130 L+E+ Sbjct: 59 LDEL 62 >UniRef50_C0BEF9 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0BEF9_9FIRM Length = 319 Score = 59.7 bits (143), Expect = 3e-08, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%) Query: 72 EFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEI 130 EF+ +RK+ LTQ++ +EI SR+E G P S L+++ + + + EI Sbjct: 8 EFLKVLRKERGLTQEQLAEILLVSGRTISRWETGTNMPDLSI--LIKMAEFYNVEVKEI 64 >UniRef50_B7C7R8 Putative uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=B7C7R8_9FIRM Length = 333 Score = 59.7 bits (143), Expect = 3e-08, Method: Composition-based stats. Identities = 19/128 (14%), Positives = 39/128 (30%), Gaps = 4/128 (3%) Query: 3 CPVCHQ-GEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 61 C C + + + RG I C C + D + ++ Sbjct: 8 CVECREMSSYSLQKRCVTKNIRGENLTF-EITCAVCDTCGGFMSAPGIIDLNVHEIDEQY 66 Query: 62 ASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 + + E I + + ++ + S + G G +RY G P ++R Sbjct: 67 RKLKGLV-SIEDIHTLMELYNIGKAPLSIVLGFGEITITRYLLGQV-PSKEYSNIIRNAL 124 Query: 122 KHPELLNE 129 P + + Sbjct: 125 SSPVYMEQ 132 >UniRef50_B9K2R1 Putative uncharacterized protein n=1 Tax=Agrobacterium vitis S4 RepID=B9K2R1_AGRVS Length = 64 Score = 59.7 bits (143), Expect = 3e-08, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 73 FIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLL-RVLDKH 123 + +R L +TQ E + G + S++E G A+P S L+ ++ ++H Sbjct: 6 DVKAIRADLKMTQAEFASEVGVSQSMVSQWETGTAKPRGSATILIGQLRERH 57 >UniRef50_Q3R7W9 Helix-turn-helix motif n=1 Tax=Xylella fastidiosa subsp. sandyi Ann-1 RepID=Q3R7W9_XYLFA Length = 148 Score = 59.7 bits (143), Expect = 3e-08, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 29/59 (49%) Query: 64 VNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDK 122 + ++ I +RK++ ++Q + + G V + +EKG A+ K+LR L K Sbjct: 49 MKPGKLSGTEIRFMRKEIEMSQSSLAALLGTNVQTLAAWEKGKAKISGPADKMLRFLVK 107 >UniRef50_D0IHU8 Putative uncharacterized protein n=1 Tax=Vibrio sp. RC586 RepID=D0IHU8_9VIBR Length = 223 Score = 59.3 bits (142), Expect = 4e-08, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 2/51 (3%) Query: 73 FIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKH 123 + VR +L L Q + + G + SRYE+G P L R+++ + Sbjct: 15 RLKSVRTQLGLNQSQMAGQIGVSKDTLSRYERGELTPS--IDVLKRIIESY 63 >UniRef50_C1FA11 DNA-binding protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1FA11_ACIC5 Length = 363 Score = 59.3 bits (142), Expect = 4e-08, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 29/69 (42%) Query: 43 SIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRY 102 + + Q K+ S + I +R++L ++Q+ + G + SR+ Sbjct: 82 EYADHHNACMHKGQGKSVSGSAKQLDQVAKNIKALRERLEMSQQRFALALGVDQGSVSRW 141 Query: 103 EKGNAQPHP 111 E+G +P P Sbjct: 142 ERGKIRPTP 150 >UniRef50_A5ZTD7 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZTD7_9FIRM Length = 349 Score = 59.3 bits (142), Expect = 4e-08, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 33/58 (56%) Query: 60 FRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLL 117 S ++ + I+K+R+ L+Q++ +EI G A SR+E G + P+ +T+ L+ Sbjct: 1 MNRSKDSNQNIAKTILKIRQDNKLSQEQFAEIVGVTRQAVSRWEMGISAPNINTLILM 58 >UniRef50_Q24LF2 Putative uncharacterized protein n=1 Tax=Clostridium phage phi CD119 RepID=Q24LF2_9CAUD Length = 72 Score = 59.3 bits (142), Expect = 4e-08, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 31/51 (60%) Query: 67 ETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLL 117 T + I VRK++++TQK+ + +FG A+ YE G+ +P+ T+ L+ Sbjct: 1 MTKFKDNIKLVRKQMNMTQKQFASLFGISERAYQYYEAGSREPNLETLILI 51 >UniRef50_A7NG24 Transcriptional regulator, XRE family n=2 Tax=Roseiflexus RepID=A7NG24_ROSCS Length = 110 Score = 59.3 bits (142), Expect = 4e-08, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 28/61 (45%) Query: 61 RASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVL 120 R PE I +R+ + LTQ+E +++ S +E G PH ST K L ++ Sbjct: 8 RRRRATYVWKPEMIRALREHMDLTQRELADLLEVRQQTISEWETGLHTPHRSTQKTLSMV 67 Query: 121 D 121 Sbjct: 68 A 68 >UniRef50_D1N218 Transcriptional regulator, XRE family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N218_9BACT Length = 73 Score = 59.3 bits (142), Expect = 4e-08, Method: Composition-based stats. Identities = 10/52 (19%), Positives = 24/52 (46%) Query: 64 VNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIK 115 + + E + +R++ +Q++ + G + +R+E G A+P K Sbjct: 1 MPSMENIAEQLKALRRQRGWSQEDLARELGVSFSTVNRWENGKAKPSRLAQK 52 >UniRef50_C0WMN7 Possible XRE family transcriptional regulator n=1 Tax=Lactobacillus buchneri ATCC 11577 RepID=C0WMN7_LACBU Length = 75 Score = 58.9 bits (141), Expect = 4e-08, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 20/50 (40%) Query: 68 TVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLL 117 + + R K+ LTQ+E S S +E G + P + LL Sbjct: 1 MKFSDKVKVCRNKMGLTQEELSVKLNVSRKTVSAWENGRSYPDIQMLILL 50 >UniRef50_A8U6K1 Possible transcriptional regulator n=1 Tax=Carnobacterium sp. AT7 RepID=A8U6K1_9LACT Length = 104 Score = 58.9 bits (141), Expect = 5e-08, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 30/67 (44%), Gaps = 9/67 (13%) Query: 73 FIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLL---------RVLDKH 123 + + R L +TQ+E +E S +E G P +++ L+ +++ Sbjct: 6 RLKQRRNTLKMTQEEVAEKIHVSRQTISNWENGRNLPDINSLILISEIYAISLDKLMKGD 65 Query: 124 PELLNEI 130 P+++ ++ Sbjct: 66 PKMVKKL 72 >UniRef50_A7H3K3 Transcriptional regulator, Cro/CI family n=1 Tax=Campylobacter jejuni subsp. doylei 269.97 RepID=A7H3K3_CAMJD Length = 95 Score = 58.9 bits (141), Expect = 5e-08, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Query: 74 IVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQP-HPSTIKLLRVLDKHPELL 127 I ++R++L+LTQ E ++ SRYE P I+L++ + +P + Sbjct: 3 IKELRERLNLTQSEFAKNLNINQAIVSRYENKKLTPTSEFIIRLIKTFNANPNFI 57 >UniRef50_D2TX49 Phage transcriptional regulator n=1 Tax=Arsenophonus nasoniae RepID=D2TX49_9ENTR Length = 237 Score = 58.9 bits (141), Expect = 5e-08, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 64 VNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLL-RVLDK 122 + T I RK+L LTQ E ++ G + +++E G+ +P + +L +VL Sbjct: 15 MKTSTSISNRIRDRRKELRLTQNEIAKALGVSRVSVTKWENGDTKPDGENLHILTKVLAC 74 Query: 123 HPELL 127 + E L Sbjct: 75 NIEWL 79 >UniRef50_Q8UI35 Transcriptional regulator n=2 Tax=Rhizobium/Agrobacterium group RepID=Q8UI35_AGRT5 Length = 152 Score = 58.9 bits (141), Expect = 5e-08, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 40/108 (37%), Gaps = 3/108 (2%) Query: 15 IKDIPYTFRG-RKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRASVNAETVAPEF 73 + + YT G + GI +E I+ ++ ++ + Sbjct: 3 VVEHHYTECGLMNVFISGIEVQTDDDGDEVIIVPAVNELHHVIATGIVNHPKG--ISGDE 60 Query: 74 IVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLD 121 + +R ++ LTQ E S + + R+E+G + + L+R L Sbjct: 61 LRFLRTEMGLTQSELSGLVHRDKQSIGRWERGEVEIDSPSETLIRRLA 108 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.312 0.137 0.413 Lambda K H 0.267 0.0421 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 717,499,106 Number of Sequences: 3077464 Number of extensions: 24774551 Number of successful extensions: 155602 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 4558 Number of HSP's successfully gapped in prelim test: 855 Number of HSP's that attempted gapping in prelim test: 150438 Number of HSP's gapped (non-prelim): 5624 length of query: 131 length of database: 1,040,396,356 effective HSP length: 96 effective length of query: 35 effective length of database: 744,959,812 effective search space: 26073593420 effective search space used: 26073593420 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 87 (38.1 bits)