18/01/2012 06:32:49 : INFO  : Run start: Wed Jan 18 06:32:49 GMT 2012
18/01/2012 06:32:49 : INFO  : Initialised job
18/01/2012 06:32:49 : INFO  : Renaming log file 'phyre2_20120118_063249.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/e6795bd6e3952764/phyre_20120118_063249.log'
18/01/2012 06:32:49 : INFO  : Initialised job:
Sequence
>batch____
MKKMMIATLAAASVLLAVANQAXAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI
DVDICRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT
GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS
DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS
IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKEGDYGKDLKLDNKWAYNIIK
QVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR

18/01/2012 06:32:49 : INFO  : Checked sequence
18/01/2012 06:32:49 : INFO  : Finding homologues with PSI-BLAST
18/01/2012 06:32:49 : INFO  : PSI-BLAST 3 iterations
18/01/2012 06:34:58 : INFO  : PSI-BLAST 5 iterations
18/01/2012 06:38:16 : INFO  : Finished PSI-BLAST
18/01/2012 06:38:16 : INFO  : Running Buildali to generate a3m file
18/01/2012 06:59:29 : INFO  : Converting to HMM
18/01/2012 06:59:36 : INFO  : Calibrating HMM
18/01/2012 06:59:45 : INFO  : Searching HMM database
18/01/2012 07:06:09 : INFO  : Finished buildali
18/01/2012 07:06:09 : INFO  : Predicting secondary structure
18/01/2012 07:06:09 : INFO  : Predicted secondary structure (PSI-Pred)
18/01/2012 07:06:09 : INFO  : Predicting Disordered regions
18/01/2012 07:06:09 : INFO  : Predicted Disorder (Disopred)
18/01/2012 07:06:09 : INFO  : Running memsat_svm check
18/01/2012 07:08:06 : INFO  : Globular protein
18/01/2012 07:08:06 : INFO  : Predicted Transmembrane (memsat_svm) ID 'e6795bd6e3952764'
18/01/2012 07:08:06 : INFO  : Initialising fold library search
18/01/2012 07:08:06 : INFO  : Initialised search input
18/01/2012 07:08:06 : INFO  : Building Ensemble models
18/01/2012 07:08:06 : INFO  : Building hh.c2vhaB_.model.1.pdb
18/01/2012 07:08:07 : INFO  : Building hh.c2ylnA_.model.2.pdb
18/01/2012 07:08:07 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/e6795bd6e3952764/hh.c2ylnA_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/e6795bd6e3952764/c2ylnA_.2.pdb
18/01/2012 07:08:07 : INFO  : Building hh.c3hv1A_.model.3.pdb
18/01/2012 07:08:08 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/e6795bd6e3952764/hh.c3hv1A_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/e6795bd6e3952764/c3hv1A_.3.pdb
18/01/2012 07:08:08 : INFO  : Building hh.c2v25B_.model.4.pdb
18/01/2012 07:08:08 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/e6795bd6e3952764/hh.c2v25B_.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/e6795bd6e3952764/c2v25B_.4.pdb
18/01/2012 07:08:08 : INFO  : Building hh.c3k4uA_.model.5.pdb
18/01/2012 07:08:09 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/e6795bd6e3952764/hh.c3k4uA_.model.5.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/e6795bd6e3952764/c3k4uA_.5.pdb
18/01/2012 07:08:09 : INFO  : Building hh.c2o1mB_.model.6.pdb
18/01/2012 07:08:09 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/e6795bd6e3952764/hh.c2o1mB_.model.6.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/e6795bd6e3952764/c2o1mB_.6.pdb
18/01/2012 07:08:10 : INFO  : Building c2vhaB_.1.pdb
18/01/2012 07:08:10 : INFO  : Building c2ylnA_.2.pdb
18/01/2012 07:08:10 : INFO  : Building c3hv1A_.3.pdb
18/01/2012 07:08:11 : INFO  : Building c2v25B_.4.pdb
18/01/2012 07:08:11 : INFO  : Building c3k4uA_.5.pdb
18/01/2012 07:08:12 : INFO  : Building c2o1mB_.6.pdb
18/01/2012 07:08:12 : INFO  : Building c1xt8B_.7.pdb
18/01/2012 07:08:13 : INFO  : Building c3kbrA_.8.pdb
18/01/2012 07:08:13 : INFO  : Building c2ieeB_.9.pdb
18/01/2012 07:08:14 : INFO  : Building d2a5sa1.10.pdb
18/01/2012 07:08:14 : INFO  : Building c3kzgB_.11.pdb
18/01/2012 07:08:17 : INFO  : Building c3g41A_.12.pdb
18/01/2012 07:08:19 : INFO  : Building c2yjpB_.13.pdb
18/01/2012 07:08:21 : INFO  : Building c2q89A_.14.pdb
18/01/2012 07:08:23 : INFO  : Building c3r39A_.15.pdb
18/01/2012 07:08:23 : INFO  : Building d1xt8a1.16.pdb
18/01/2012 07:08:24 : INFO  : Building c3i6vA_.17.pdb
18/01/2012 07:08:24 : INFO  : Building d1hsla_.18.pdb
18/01/2012 07:08:25 : INFO  : Building c2q2aD_.19.pdb
18/01/2012 07:08:25 : INFO  : Building d1lsta_.20.pdb
18/01/2012 07:08:34 : INFO  : Finished HH model building
18/01/2012 07:08:34 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
18/01/2012 07:08:40 : INFO  : html domain output complete ID 'e6795bd6e3952764'
18/01/2012 07:09:52 : WARN  : Failed to run assembler on model
18/01/2012 07:16:38 : WARN  : Failed to run assembler on model
18/01/2012 07:17:49 : WARN  : Failed to run assembler on model
18/01/2012 07:18:08 : WARN  : Failed to run assembler on model
18/01/2012 07:19:25 : WARN  : Failed to run assembler on model
18/01/2012 07:30:35 : WARN  : Failed to run assembler on model
18/01/2012 08:05:28 : WARN  : Failed to run assembler on model
18/01/2012 08:07:45 : INFO  : Run end  : Wed Jan 18 08:07:45 GMT 2012
