Phyre 2 alignment of P45766 with d1a9xa2

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Job Description | P45766
Confidence | 22.98% | Date | Thu Jan 5 12:03:41 GMT 2012
Rank | 197 | Aligned Residues | 46
% Identity | 13% | Template | d1a9xa2
SCOP info | Methylglyoxal synthase-like | Methylglyoxal synthase-like | Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain
Resolution | 1.80

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 146 | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . |  |  | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | G | A | T | V | C | I | Q | A | G | T | D | T | E | L | N | V | A | D | Y | F | K | A | N | N | M | K | Y | T | P | V | T | F | D | R | . | . | S | D | E | S | A | K | A | L | E | S | G | R | C | D | T | L | A | S
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | G | F | E | L | D | A | T | H | G | T | A | . | . | . | . | . | . | I | V | L | G | E | A | G | I | N | P | R | L | V | N | K | V | H | E | G | R | P | H | I | Q | D | R | I | K | N | G | E | Y | T | Y | I | I | N
Template Known Secondary structure |  | T |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  | T | T | T |  |  |  |  |  |  | B |  | T | T | T |  | S | S | B |  |  |  |  |  |  |  | T |  |  | S |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 968 | . | 970 | . | . | . | . | . | . | . | . |  |  |  |  |  |  | . | 980 | . | . | . | . | . | . | . | . | . | 990 | . | . | . | . | . | . | . | . | . | 1000 | . | . | . | . | . | . | . | . | . | 1010 | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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