| Secondary structure and disorder prediction |   |
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1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 |
| Sequence |   |
M | P | L | V | I | V | A | I | G | V | I | L | L | L | L | L | M | I | R | F | K | M | N | G | F | I | A | L | V | L | V | A | L | A | V | G | L | M | Q | G | M | P | L | D | K | V | I | G | S | I | K | A | G | V | G | G | T | L | G | S |
| Secondary structure |   |
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| Disorder |   |
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| Disorder confidence |   |
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. | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 |
| Sequence |   |
L | A | L | I | M | G | F | G | A | M | L | G | K | M | L | A | D | C | G | G | A | Q | R | I | A | T | T | L | I | A | K | F | G | K | K | H | I | Q | W | A | V | V | L | T | G | F | T | V | G | F | A | L | F | Y | E | V | G | F | V | L |
| Secondary structure |   |
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| SS confidence |   |
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| Disorder |   |
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| Disorder confidence |   |
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. | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 |
| Sequence |   |
M | L | P | L | V | F | T | I | A | A | S | A | N | I | P | L | L | Y | V | G | V | P | M | A | A | A | L | S | V | T | H | G | F | L | P | P | H | P | G | P | T | A | I | A | T | I | F | N | A | D | M | G | K | T | L | L | Y | G | T | I |
| Secondary structure |   |
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| Disorder |   |
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| Disorder confidence |   |
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. | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 |
| Sequence |   |
L | A | I | P | T | V | I | L | A | G | P | V | Y | A | R | V | L | K | G | I | D | K | P | I | P | E | G | L | Y | S | A | K | T | F | S | E | E | E | M | P | S | F | G | V | S | V | W | T | S | L | V | P | V | V | L | M | A | M | R | A |
| Secondary structure |   |
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| SS confidence |   |
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| Disorder |   |
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| ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? |
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| Disorder confidence |   |
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. | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 |
| Sequence |   |
I | A | E | M | I | L | P | K | G | H | A | F | L | P | V | A | E | F | L | G | D | P | V | M | A | T | L | I | A | V | L | I | A | M | F | T | F | G | L | N | R | G | R | S | M | D | Q | I | N | D | T | L | V | S | S | I | K | I | I | A |
| Secondary structure |   |
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| SS confidence |   |
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| Disorder |   |
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| Disorder confidence |   |
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. | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 |
| Sequence |   |
M | M | L | L | I | I | G | G | G | G | A | F | K | Q | V | L | V | D | S | G | V | D | K | Y | I | A | S | M | M | H | E | T | N | I | S | P | L | L | M | A | W | S | I | A | A | V | L | R | I | A | L | G | S | A | T | V | A | A | I | T |
| Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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| SS confidence |   |
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| Disorder |   |
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| Disorder confidence |   |
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. | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 |
| Sequence |   |
A | G | G | I | A | A | P | L | I | A | T | T | G | V | S | P | E | L | M | V | I | A | V | G | S | G | S | V | I | F | S | H | V | N | D | P | G | F | W | L | F | K | E | Y | F | N | L | T | I | G | E | T | I | K | S | W | S | M | L | E |
| Secondary structure |   |
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| SS confidence |   |
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. | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . |
| Sequence |   |
T | I | I | S | V | C | G | L | V | G | C | L | L | L | N | M | V | I |
| Secondary structure |   |
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| Disorder confidence |   |
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| Confidence Key |
| High(9) |   |
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Low (0) |
| ? | Disordered |
  | Alpha helix |
  | Beta strand |
Hover over an aligned region to see model and summary info
Please note, only up to the top 20 hits are modelled to reduce computer load
|
| 1 |
|
PDB 2vof chain A
Region: 57 - 100 Aligned: 44 Modelled: 44 Confidence: 8.8% Identity: 18% PDB header:apoptosis Chain: A: PDB Molecule:bcl-2-related protein a1;
PDBTitle: structure of mouse a1 bound to the puma bh3-domain
Phyre2
| 2 |
|
PDB 2knc chain A
Region: 174 - 214 Aligned: 41 Modelled: 41 Confidence: 6.8% Identity: 10% PDB header:cell adhesion Chain: A: PDB Molecule:integrin alpha-iib;
PDBTitle: platelet integrin alfaiib-beta3 transmembrane-cytoplasmic2 heterocomplex
Phyre2
| 3 |
|
PDB 2jln chain A
Region: 178 - 217 Aligned: 40 Modelled: 40 Confidence: 6.5% Identity: 8% PDB header:membrane protein Chain: A: PDB Molecule:mhp1;
PDBTitle: structure of mhp1, a nucleobase-cation-symport-1 family2 transporter
Phyre2
|
| Detailed template information |   |
| Binding site prediction |   |
Due to computational demand, binding site predictions are not run for batch jobs
If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite
| Transmembrane helix prediction |   |
Transmembrane helices have been predicted in your sequence to adopt the topology shown below

Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
| If you use the binding site
predictions from 3DLigandSite, please also cite: |
| 3DLigandSite: predicting ligand-binding sites using similar structures. |
| Wass MN, Kelley LA and Sternberg
MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed] |
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