HHsearch 1.5 NAME batch____ FAM FILE query COM //bmm/www/servers/phyre2/HH/hhmake -i /bmm/www/servers/phyre2/public_html/phyre2_output/e6613971cde1aac7/query.a3m -o /bmm/www/servers/phyre2/public_html/phyre2_output/e6613971cde1aac7/query.hhm DATE Tue Jan 10 20:58:41 2012 LENG 92 match states, 92 columns in multiple alignment FILT 16 out of 18 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.4 EVD 0.4110 -0.3769 SEQ >ss_pred CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC >ss_conf 96469999999998885238604789998777889999732010132579999999999999999726798368999999999999985059 >Consensus mixefexxlxxxlDxxVxxgsDDELFaxgYLrGHxslavaqxExxgxxxxxxLxxxixxsLxxAxxxxELspxDqxxVxxlWxxLxxxaxxx >batch____ MIAEFESRILALIDGMVDHASDDELFASGYLRGHLTLAIAELESGDDHSAQAVHTTVSQSLEKAIGAGELSPRDQALVTDMWENLFQQASQQ >UniRef50_A6AZW6(1-87:87) YfcL protein n=18 Tax=Vibrionales RepID=A6AZW6_VIBPA E=5e-20 s/c=1.13 id=44% cov=96% MIIEFEEKLLELIDARIENASDDELFAGGYLRGHISLSAASCEEDGINDVEELKSRIANSLEEA--RAELTPADRVIVSDLWQELQSQS--- >UniRef50_Q5QX40(9-93:98) Uncharacterized conserved protein n=2 Tax=Idiomarina RepID=Q5QX40_IDILO E=1e-19 s/c=1.15 id=34% cov=90% ------ERLETVFDDAVVSGTDDELFACGYLRGHFDLVVAQLEMAGETQPERIMPALREAVHKT--RHELSPADQTHINNVLDKLALKAT-- >UniRef50_UPI0000E0E875(8-88:88) hypothetical protein OM2255_21198 n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0E875 E=2e-17 s/c=1.11 id=32% cov=88% ------DTIEAQLDMIVDSGTDDELFIASYFHGHFSLAVSQVPDDVDDKMVFLRQTLIANLNDAFVNRELEDIDQQKIWTLLERLF------ >UniRef50_A1SZB4(1-82:84) Putative uncharacterized protein n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SZB4_PSYIN E=1e-13 s/c=0.94 id=32% cov=86% --------MQAHLNSFIADGSDHELFIASYLHGHFDVAVANVEkliERGEASPiSTLQATLDAQLQEAFDNNELSTEDAGQVTALFNSLF------ >UniRef50_Q47XJ7(12-93:98) Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47XJ7_COLP3 E=0.0009 s/c=0.54 id=27% cov=88% ------EQLYKYLDSLFEQDIDsDTLFASGYLRGLIALTATDFGDEQQSLTTELIQAINHKI--AAAKAELSPQDSVIVSNFWLKLQEK---- >UniRef50_Q15QE7(16-103:103) Putative uncharacterized protein n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15QE7_PSEA6 E=3e-21 s/c=1.16 id=38% cov=97% ---EFVDSTQSYLDGVVVDGSDQELFIASYLTGHFSLVTSNALALDDYSLKAIDTYMQTSLEKAYANNEVEGQDQVQVSALWQSLFAKASR- >UniRef50_A6F8L3(1-76:79) Putative uncharacterized protein n=1 Tax=Moritella sp. PE36 RepID=A6F8L3_9GAMM E=3e-19 s/c=1.26 id=36% cov=84% ---------MERLDGFVEQGTSDQLFAAEYLHSHVTFATAKCENIGKIYPHDIKFQVVHSLRDALVANELTPRKQELVLSMWDAI------- >UniRef50_Q3IJ62(3-91:91) Putative uncharacterized protein n=3 Tax=Alteromonadales RepID=Q3IJ62_PSEHT E=3e-18 s/c=1.04 id=40% cov=96% -LVNYIDAAQHYFDDLVIKATDDELFAGGYLRGHFDLAVgyAQVEKLTIST-DELNETVEQSLVKAYHNGELNEDDKTLVARLWEEVKALA--- >UniRef50_A9KTV4(1-85:94) YfcL protein n=21 Tax=Shewanella RepID=A9KTV4_SHEB9 E=3e-17 s/c=1.05 id=33% cov=93% MLEHYEDALEQWIASVVSHGDDDALFACGYLQGHVAVVLSQLEAQGATDLDALMLKMTDCL--ALARQELNDADYALVEQAWAQLHA----- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * * * * 0 * * * * * * * * * 1 0 * * * * * * 2182 0 0 I 2 * * * * * * * 580 * 1595 * * * * * * * * * * 2 0 * * * * * * 2408 0 0 A 3 1653 * * 2512 * * * 1511 * * * * * * * * * 2682 * * 3 0 * * * * * * 2408 0 0 E 4 * * * 468 * * 2758 * * * * 2951 * * * * * * * * 4 0 * * * * * * 2622 0 0 F 5 * * * * 468 * * * * * * * * * * * * * * 1851 5 0 * * * * * * 2622 0 0 E 6 * * * 470 * * * 2951 * * * * * * * * * 2749 * * 6 0 * * * * * * 2622 0 0 S 7 2857 * 1500 1367 * * * * * * * * * * * 3942 4171 * * * 7 0 * * * * * * 3316 0 0 R 8 2615 * * 3622 * * * * 2328 * * * * 3244 1940 3465 3325 * * * 8 0 * * * * * * 3316 0 0 I 9 3821 * * * * * * 1620 * 1330 2985 * * * * * 3646 * * * 9 0 * * * * * * 3418 0 0 L 10 * * * 1788 * * * * * 1685 3411 * * 2245 * * * * * 3403 10 0 * * * * * * 3572 0 0 A 11 1664 * 4698 2169 * * 3956 * 3403 * * * * 3771 * 3785 3074 * * * 11 0 * * * * * * 3572 0 0 L 12 * * * * * * 3757 * * 1685 * * * 3631 3411 3968 * 3802 3771 2111 12 0 * * * * * * 3572 0 0 I 13 * * * * 2877 * * 1380 * 1060 * * * * * * * * * * 13 0 * * * * * * 3572 0 0 D 14 3771 * 230 * * * * * * * * 3757 * * * * * * * * 14 0 * * * * * * 3572 0 0 G 15 2583 * 2027 * * 2196 * * * * 3631 4411 * * * 2048 * * * * 15 0 * * * * * * 3572 0 0 M 16 3802 * * * 2574 * * 3631 * 2279 3365 * * 3626 3540 * * 2254 * * 16 0 * * * * * * 3572 0 0 V 17 * * * * 3403 * * 2645 * * * * * * * * * 424 * * 17 0 * * * * * * 3572 0 0 D 18 3757 * 2916 1289 * * * 3956 * * * 3968 * * * 3771 * 2452 * * 18 0 * * * * * * 3572 0 0 H 19 * * 2771 * * * 1830 * 3956 * * 3012 * 2407 * 2355 * * * * 19 0 * * * * * * 3572 0 0 A 20 1606 * 3403 * * 793 * * * * * * * * * * * * * * 20 0 * * * * * * 3572 0 0 S 21 * * 3771 * * * * 3403 * * * * * * * 940 1686 * * * 21 0 * * * * * * 3572 0 0 D 22 * * 278 * * * * * * * * * * * * 2916 4558 * * * 22 143 3403 * 0 * * * 3572 1000 0 D 23 * * 229 * * * 3757 * * * * * * 3785 * * * * * * 23 0 * * * * * * 3572 0 0 E 24 3771 * * 438 * * * * * * * * * 3411 * * 3403 * * * 24 0 * * * * * * 3572 0 0 L 25 * * * * * * * * * 0 * * * * * * * * * * 25 0 * * * * * * 3572 0 0 F 26 * * * * 0 * * * * * * * * * * * * * * * 26 0 * * * * * * 3572 0 0 A 27 496 * * * * * * 1781 * * * * * * * * * * * * 27 0 * * * * * * 3572 0 0 S 28 1377 2787 * * * 1854 * * * * * * * * * 2371 * * * * 28 0 * * * * * * 3572 0 0 G 29 * * * 3411 * 702 * * * * * * * * * 1781 * * * * 29 0 * * * * * * 3572 0 0 Y 30 * * * * * * * * * * * * * * * * * * * 0 30 0 * * * * * * 3572 0 0 L 31 * * * * 3631 * * * * 121 * * * * * * * * * * 31 0 * * * * * * 3572 0 0 R 32 * * * * * * 2008 * * * * * * 2866 884 * 3785 * * * 32 0 * * * * * * 3572 0 0 G 33 * * * * * 142 * * * * * * * * * 3411 * * * * 33 0 * * * * * * 3572 0 0 H 34 * * * * * * 143 * * 3403 * * * * * * * * * * 34 0 * * * * * * 3572 0 0 L 35 * * * * 1227 * * 1935 * 2795 * * * * * * * 2580 * * 35 0 * * * * * * 3572 0 0 T 36 2110 * 2251 * * * * * * * * * * * * 1643 2071 * * * 36 0 * * * * * * 3572 0 0 L 37 * * * * 3411 * * * * 622 * * * * * * * 1964 * * 37 0 * * * * * * 3572 0 0 A 38 1280 * * 3968 * * * * * * * * * * * 2236 3403 2201 * * 38 0 * * * * * * 3572 0 0 I 39 1824 * * * * * * 4272 * 3771 * * * * * * 2586 1231 * * 39 96 3956 * 1000 1000 * * 3572 1000 0 A 40 701 * * * * * * * * * * * * * 3968 2143 3403 * * * 40 0 * * * * * * 3572 0 0 E 41 * * 3403 3365 * * * * 3411 * * 2400 * 1053 * 4541 * * * * 41 0 * * * * * * 3572 0 0 L 42 3085 1938 * * 3403 * * * * 1940 * * * * * * * 1910 * * 42 0 * * * * * * 3572 0 0 E 43 * * * 411 * 3403 * * * 3785 * * 3631 * * * * * * * 43 111 3757 * 1585 585 * * 3572 1000 0 S 44 2375 * 2513 1805 * * * * 3956 * 2883 3411 * * * 4272 * * * * 44 0 * * * * * * 3572 0 0 G 45 3802 * 3016 2510 * 4272 4411 3411 * 2868 * 4465 * 3105 2859 * * * * * 45 0 * * * * * * 3572 0 0 D 46 * * 2545 3968 * 929 * * * * * * * 3403 * * 3956 3631 * * 46 0 * * * * * * 3572 0 0 D 47 3771 * 1895 2071 * * * 2404 3411 * * * * 3403 * * * 4558 * * 47 0 * * * * * * 3572 0 0 H 48 2859 * 3631 * * * 3365 3411 * * * 3540 * 4411 * 2653 2146 * * 3785 48 0 * * * * * * 3572 0 0 S 49 * * 2651 3626 * * * * 3631 3403 * * * 3802 * 1932 2674 * * 3411 49 96 * 3956 * * * * 3572 0 0 A 50 3224 * * * * * * 4441 * 1469 3560 * 1965 * * * 3336 4450 * * 50 119 3662 * 0 * 0 * 3506 1000 1000 Q 51 * * 2193 1906 * * 3411 * 3785 * * * * 3340 * 3757 3403 3631 * * 51 0 * * * * * * 3572 0 0 A 52 1787 * 3411 2308 3631 * * 4539 * 3968 * * * * 3802 * 3103 4698 * * 52 0 * * * * * * 3572 0 0 V 53 * * * * 4558 * * 2069 * 583 * * * * * * * 4272 * * 53 0 * * * * * * 3572 0 0 H 54 * * 3785 * * * 2795 3403 1938 * 2787 2962 * 3757 3631 * * * * * 54 0 * * * * * * 3572 0 0 T 55 3047 * * 2962 3411 * * * * 3771 * * 3802 1965 * 3540 3008 4465 * * 55 0 * * * * * * 3572 0 0 T 56 2589 * * * * * 4539 * 2866 * * * * 3411 2209 * 1885 * * 3785 56 0 * * * * * * 3572 0 0 V 57 * * * * * * * 1935 * 2144 2254 * * * * * * 1725 * * 57 0 * * * * * * 3572 0 0 S 58 4541 * 3757 2782 * * * 3631 * 3968 * 2862 * 3064 3802 3365 3771 3411 * * 58 0 * * * * * * 3572 0 0 Q 59 2693 * 2630 2633 * * 2407 * * * * 4541 * 2692 * 3968 3785 * * * 59 0 * * * * * * 3572 0 0 S 60 3802 3771 * * * * * * 3403 * * 3631 * 3757 * 723 * * * * 60 0 * * * * * * 3572 0 0 L 61 * * * * * * * 2838 * 343 * * * * * * * 3802 * * 61 265 * 2575 * * * * 3572 0 0 E 62 * * 4158 1206 * * 3519 * * * * 2746 * 3530 3169 * * 3710 * * 62 0 * * * * * 0 3267 0 1663 K 63 3350 * 2286 2835 * * * * 1456 * * 4179 * 4158 * 3626 * * * * 63 0 * * * * 0 * 3267 0 1663 A 64 107 * * * * * * * * * * * * * * * 3802 * * * 64 393 * 2067 * * * * 3572 0 0 I 65 2979 * * * 1854 * * 2315 * 2192 * * * * * * * * * 2501 65 0 * * * * * 0 3424 0 1767 G 66 1666 * 3410 * * 3876 3511 * 2244 * * * * * * * * 2160 * * 66 0 * * * * 0 * 3424 0 1767 A 67 2778 * * * * * * * 2862 * * 1159 * * 1895 * * * * * 67 0 * * * * * * 3572 0 0 G 68 2862 * * * * 2262 3802 * * * * 1716 * 3771 3631 3012 * * * * 68 0 * * * * * * 3572 0 0 E 69 * * * 0 * * * * * * * * * * * * * * * * 69 0 * * * * * * 3572 0 0 L 70 * * * * * * * * * 109 * * * * * * * 3785 * * 70 0 * * * * * * 3572 0 0 S 71 * * * 2203 * * * * * * * 2861 * * * 976 2868 * * * 71 0 * * * * * * 3572 0 0 P 72 * * 2700 3956 * 3785 * * * * * * 808 * * 3968 3757 * * * 72 0 * * * * * * 3572 0 0 R 73 1681 * 3956 2859 * * * 3631 * * * * 3438 2581 2778 * * * * * 73 0 * * * * * * 3572 0 0 D 74 * * 142 * * * * * 3411 * * * * * * * * * * * 74 0 * * * * * * 3572 0 0 Q 75 2859 * * * * * * * 3956 * * * * 1111 2583 3403 * * * 3771 75 0 * * * * * * 3572 0 0 A 76 1983 * * 3411 * 3757 * 4539 3968 * * * * 3631 * * 2877 1970 * * 76 0 * * * * * * 3572 0 0 L 77 * * * * * * 3802 1935 3631 1412 * * * 2249 * * * * * * 77 0 * * * * * * 3572 0 0 V 78 * * * * * * * 2714 * * * * * * * * * 239 * * 78 0 * * * * * * 3572 0 0 T 79 2087 * * 3771 * * * * 3968 3411 * 3096 * * * 2251 2992 * 3631 * 79 0 * * * * * * 3572 0 0 D 80 2249 * 3400 3616 * 4465 * * * * * 2589 * 2620 3956 3411 3631 * * * 80 0 * * * * * * 3572 0 0 M 81 3771 * * * 3403 * * * * 937 2388 * * * * * * 3074 * * 81 0 * * * * * * 3572 0 0 W 82 * * * * 3757 * * * * 2714 * * * * * * * * 370 * 82 0 * * * * * * 3572 0 0 E 83 2866 * 2260 1790 * * * * * 3403 * 3757 * 2348 * * * * * * 83 0 * * * * * * 3572 0 0 N 84 2826 * * 2733 * * * * 2589 * * 4272 * 2697 2397 2771 * * * * 84 0 * * * * * * 3572 0 0 L 85 * * * * * * * 3411 * 249 * * * * * * * 3956 * * 85 0 * * * * * * 3572 0 0 F 86 2587 * * * 1470 * 3625 * 3821 * * * * 2340 * * * 3827 * 4244 86 0 * * * * * * 3418 0 0 Q 87 1003 * * 3053 * * * * * 3249 * * * 2284 * 3838 * * * * 87 0 * * * * * * 3139 0 0 Q 88 * * * * * * * * 1280 3181 * * * 1065 * * * * * * 88 0 * * * * * * 2839 0 0 A 89 161 * * * * * * * * * * * * * * 3241 * * * * 89 0 * * * * * * 2592 0 0 S 90 * * * * * * * * * * * * * * * 596 1564 * * * 90 0 * * * * * * 1996 0 0 Q 91 * * * * * * * * * * * * * 1000 1000 * * * * * 91 0 * * * * * * 1530 0 0 Q 92 * * * * * * * * * * * * * 0 * * * * * * 92 0 * * 0 * * * 1000 0 0 //