BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (466 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P71298 Putative prophage CP4-6 integrase n=7 Tax=Proteo... 961 0.0 UniRef50_B7D090 Phage integrase family protein n=1 Tax=Burkholde... 423 e-117 UniRef50_Q2SV18 Phage integrase n=20 Tax=Betaproteobacteria RepI... 406 e-112 UniRef50_A4LPJ2 Phage integrase n=2 Tax=Burkholderia pseudomalle... 392 e-107 UniRef50_Q82XM2 Phage integrase n=1 Tax=Nitrosomonas europaea Re... 375 e-102 UniRef50_Q6ARX0 Related to integrase n=5 Tax=Proteobacteria RepI... 349 1e-94 UniRef50_A1WB37 Phage integrase family protein n=5 Tax=Burkholde... 345 2e-93 UniRef50_C6MHB2 Integrase family protein n=1 Tax=Nitrosomonas sp... 345 2e-93 UniRef50_C6MJ55 Integrase family protein n=2 Tax=Betaproteobacte... 307 6e-82 UniRef50_Q12DC0 Phage integrase n=1 Tax=Polaromonas sp. JS666 Re... 279 2e-73 UniRef50_D0S9N1 Phage integrase n=1 Tax=Acinetobacter johnsonii ... 257 6e-67 UniRef50_B9ZR50 Integrase family protein n=2 Tax=Gammaproteobact... 125 3e-27 UniRef50_B7S183 Site-specific recombinase, phage integrase famil... 125 4e-27 UniRef50_C0VG60 Phage integrase n=2 Tax=Acinetobacter RepID=C0VG... 124 7e-27 UniRef50_C6KUG0 Tyrosine recombinase n=1 Tax=uncultured bacteriu... 115 3e-24 UniRef50_Q3J8Z8 Phage integrase n=2 Tax=Nitrosococcus oceani Rep... 112 3e-23 UniRef50_Q5P4X3 Phage-related integrase n=2 Tax=Betaproteobacter... 111 6e-23 UniRef50_Q5ZWK0 Phage related integrase n=15 Tax=Proteobacteria ... 107 1e-21 UniRef50_A1AQX4 Phage integrase family protein n=1 Tax=Pelobacte... 99 4e-19 UniRef50_Q5P749 Similar to phage-related integrase n=3 Tax=Bacte... 95 6e-18 UniRef50_Q129B4 Phage integrase n=1 Tax=Polaromonas sp. JS666 Re... 94 1e-17 UniRef50_A6X736 Phage integrase family protein n=1 Tax=Ochrobact... 92 3e-17 UniRef50_B5S678 Integrase protein n=1 Tax=Ralstonia solanacearum... 92 4e-17 UniRef50_C6BFQ2 Integrase family protein n=4 Tax=Betaproteobacte... 89 4e-16 UniRef50_C6RMM9 Integrase n=1 Tax=Acinetobacter radioresistens S... 87 9e-16 UniRef50_Q5P855 Phage integrase n=5 Tax=Proteobacteria RepID=Q5P... 86 4e-15 UniRef50_C6XR20 Integrase family protein n=1 Tax=Hirschia baltic... 78 6e-13 UniRef50_Q7WFY2 Phage-related integrase n=1 Tax=Bordetella bronc... 77 1e-12 UniRef50_C6I0A6 Phage integrase family protein n=1 Tax=Leptospir... 76 3e-12 UniRef50_B3E293 Integrase family protein n=1 Tax=Geobacter lovle... 75 4e-12 UniRef50_B5K270 Integrase n=1 Tax=Octadecabacter antarcticus 238... 75 5e-12 UniRef50_A1AUY6 Phage integrase family protein n=2 Tax=Desulfuro... 74 8e-12 UniRef50_B3T0I4 Putative Phage integrase family protein n=2 Tax=... 74 1e-11 UniRef50_C0VG59 Putative uncharacterized protein n=1 Tax=Acineto... 74 2e-11 UniRef50_A5G0X2 Phage integrase family protein n=1 Tax=Acidiphil... 73 3e-11 UniRef50_A5FXQ0 Phage integrase family protein n=1 Tax=Acidiphil... 72 3e-11 UniRef50_Q6ALK6 Related to integrase n=1 Tax=Desulfotalea psychr... 72 6e-11 UniRef50_D2LJU9 Integrase family protein n=1 Tax=Rhodomicrobium ... 71 9e-11 UniRef50_C1SPM2 Site-specific recombinase XerD n=1 Tax=Denitrovi... 70 1e-10 UniRef50_A5CCP8 Phage-related integrase n=25 Tax=Orientia tsutsu... 70 1e-10 UniRef50_B8KHE9 Site-specific recombinase, phage integrase famil... 69 4e-10 UniRef50_A3WST9 Probable integrase protein n=2 Tax=Bradyrhizobia... 68 9e-10 UniRef50_Q3SUE5 Phage integrase n=6 Tax=Alphaproteobacteria RepI... 67 1e-09 UniRef50_B1JLZ5 Integrase family protein n=3 Tax=Gammaproteobact... 66 2e-09 UniRef50_A3VQY7 Phage integrase n=1 Tax=Parvularcula bermudensis... 66 2e-09 UniRef50_B5EC35 Integrase family protein n=1 Tax=Geobacter bemid... 66 3e-09 UniRef50_Q1K3L6 Phage integrase n=1 Tax=Desulfuromonas acetoxida... 66 3e-09 UniRef50_Q0TL05 Phage integrase n=6 Tax=Escherichia coli RepID=Q... 66 3e-09 UniRef50_A8TPU7 Phage integrase n=1 Tax=alpha proteobacterium BA... 66 3e-09 UniRef50_A4VJM8 Integrase n=2 Tax=Gammaproteobacteria RepID=A4VJ... 65 4e-09 UniRef50_B1I2A9 Phage integrase family protein n=1 Tax=Candidatu... 65 5e-09 UniRef50_D0LNC0 Integrase family protein n=1 Tax=Haliangium ochr... 65 6e-09 UniRef50_Q89GJ7 Blr6348 protein n=1 Tax=Bradyrhizobium japonicum... 65 6e-09 UniRef50_B8ERI0 Integrase family protein n=1 Tax=Methylocella si... 65 7e-09 UniRef50_Q2GBS0 Phage integrase n=2 Tax=Sphingomonadaceae RepID=... 65 8e-09 UniRef50_Q2NBN1 Site-specific recombinase, phage integrase famil... 64 1e-08 UniRef50_B5J4F2 Site-specific recombinase, phage integrase famil... 64 1e-08 UniRef50_C5DAW2 Integrase family protein n=7 Tax=Bacillaceae Rep... 63 2e-08 UniRef50_B8J4X3 Integrase family protein n=1 Tax=Desulfovibrio d... 63 2e-08 UniRef50_Q2GBL9 Phage integrase n=3 Tax=cellular organisms RepID... 63 2e-08 UniRef50_B5J7N6 Site-specific recombinase, phage integrase famil... 63 2e-08 UniRef50_B2HWC8 Integrase n=6 Tax=Acinetobacter RepID=B2HWC8_ACIBC 62 3e-08 UniRef50_A1TXN0 Phage integrase family protein n=1 Tax=Marinobac... 62 4e-08 UniRef50_B9Z851 Integrase family protein n=1 Tax=Lutiella nitrof... 62 5e-08 UniRef50_Q1RJE3 Integrase n=9 Tax=Rickettsia RepID=Q1RJE3_RICBR 61 7e-08 UniRef50_A6Q4N1 Site-specific recombinase, phage integrase famil... 61 8e-08 UniRef50_B0PGN1 Putative uncharacterized protein n=2 Tax=Clostri... 61 9e-08 UniRef50_Q88UJ5 Prophage Lp3 protein 1, integrase n=1 Tax=Lactob... 61 1e-07 UniRef50_A9W3V7 Integrase family protein n=1 Tax=Methylobacteriu... 60 2e-07 UniRef50_C1SNQ2 Site-specific recombinase XerD n=1 Tax=Denitrovi... 60 2e-07 UniRef50_B4BIA4 Integrase family protein n=2 Tax=Geobacillus Rep... 60 2e-07 UniRef50_B6R5P1 Phage integrase n=1 Tax=Pseudovibrio sp. JE062 R... 60 2e-07 UniRef50_UPI00003841F3 COG0582: Integrase n=1 Tax=Magnetospirill... 60 2e-07 UniRef50_Q5LLE0 Site-specific recombinase, phage integrase famil... 59 3e-07 UniRef50_Q6LTT6 Hypothetical integrase n=1 Tax=Photobacterium pr... 59 5e-07 UniRef50_B3CTI8 Putative integrase n=7 Tax=Orientia tsutsugamush... 58 7e-07 UniRef50_C5SDM2 Integrase family protein n=1 Tax=Allochromatium ... 58 8e-07 UniRef50_Q2RHJ2 Phage integrase n=3 Tax=Firmicutes RepID=Q2RHJ2_... 57 1e-06 UniRef50_A3V904 Phage integrase n=5 Tax=Rhodobacteraceae RepID=A... 57 1e-06 UniRef50_A8L4Q7 Integrase family protein n=9 Tax=Actinomycetales... 57 1e-06 UniRef50_Q1K3L0 Phage integrase n=1 Tax=Desulfuromonas acetoxida... 57 1e-06 UniRef50_UPI0000383F7A COG0582: Integrase n=1 Tax=Magnetospirill... 57 2e-06 UniRef50_Q82ZU2 Site-specific recombinase, phage integrase famil... 57 2e-06 UniRef50_B6ATL3 Phage-related integrase n=1 Tax=Rhodobacterales ... 57 2e-06 UniRef50_A4Y8Q0 Phage integrase family protein n=2 Tax=Shewanell... 57 2e-06 UniRef50_A3D8Y2 Phage integrase family protein n=4 Tax=Shewanell... 57 2e-06 UniRef50_B9MQ70 Integrase family protein n=1 Tax=Anaerocellum th... 57 2e-06 UniRef50_A3UTJ0 Site-specific recombinase XerD-like n=1 Tax=Vibr... 56 2e-06 UniRef50_C0GWH6 Integrase family protein n=3 Tax=Desulfonatronos... 56 2e-06 UniRef50_Q1VBR2 Site-specific recombinase XerD-like protein n=1 ... 56 3e-06 UniRef50_A4U5E9 Phage-related integrase, n=1 Tax=Magnetospirillu... 56 3e-06 UniRef50_C6QLH5 Integrase family protein n=2 Tax=Geobacillus Rep... 56 3e-06 UniRef50_A4SIA1 Phage integrase family protein n=2 Tax=Gammaprot... 56 3e-06 UniRef50_B8IQS5 Integrase family protein n=1 Tax=Methylobacteriu... 55 5e-06 UniRef50_B9EBJ7 Integrase n=1 Tax=Macrococcus caseolyticus JCSC5... 55 5e-06 UniRef50_B5K290 Phage integrase n=2 Tax=Octadecabacter antarctic... 55 5e-06 UniRef50_B0T7J1 Integrase family protein n=4 Tax=Alphaproteobact... 55 5e-06 UniRef50_C8PEA9 Ferredoxin, 4Fe-4S n=1 Tax=Campylobacter gracili... 55 7e-06 UniRef50_C6BZG2 Integrase family protein n=1 Tax=Desulfovibrio s... 55 7e-06 UniRef50_Q64NC0 Tyrosine type site-specific recombinase n=5 Tax=... 54 8e-06 UniRef50_UPI0000383FB1 COG0582: Integrase n=1 Tax=Magnetospirill... 54 9e-06 UniRef50_C9M7U3 Integrase/recombinase XerD n=1 Tax=Jonquetella a... 54 1e-05 UniRef50_C7M6X5 Integrase family protein n=2 Tax=Capnocytophaga ... 54 1e-05 UniRef50_C7IFL0 Integrase family protein n=1 Tax=Clostridium pap... 54 1e-05 UniRef50_C6JH03 Putative uncharacterized protein n=2 Tax=Clostri... 54 1e-05 UniRef50_C7LSP4 Integrase family protein n=1 Tax=Desulfomicrobiu... 54 1e-05 UniRef50_C6HW36 Putative phage integrase n=1 Tax=Leptospirillum ... 54 1e-05 UniRef50_A1B6Q9 Phage integrase family protein n=1 Tax=Paracoccu... 54 1e-05 UniRef50_A0LL76 Phage integrase family protein n=1 Tax=Syntropho... 54 1e-05 UniRef50_B5IBE9 Site-specific recombinase, phage integrase famil... 54 1e-05 UniRef50_B5J7V0 Site-specific recombinase, phage integrase famil... 54 1e-05 UniRef50_C7JF17 Phage DNA recombinase n=8 Tax=Acetobacter pasteu... 54 1e-05 UniRef50_Q88SM0 Prophage Lp4 protein 1, integrase n=1 Tax=Lactob... 54 1e-05 UniRef50_A1AN30 Phage integrase family protein n=1 Tax=Pelobacte... 54 1e-05 UniRef50_A1VGL4 Phage integrase family protein n=1 Tax=Desulfovi... 54 2e-05 UniRef50_Q1NSR7 Phage integrase n=1 Tax=delta proteobacterium ML... 54 2e-05 UniRef50_D2LKM4 Integrase family protein n=1 Tax=Rhodomicrobium ... 54 2e-05 UniRef50_Q2JGT4 Phage integrase n=4 Tax=Frankia RepID=Q2JGT4_FRASC 54 2e-05 UniRef50_Q1R2C9 Integrase-like protein n=9 Tax=root RepID=Q1R2C9... 53 2e-05 UniRef50_C2KW01 Possible tyrosine recombinase n=7 Tax=Clostridia... 53 2e-05 UniRef50_B5J7B6 Site-specific recombinase, phage integrase famil... 53 2e-05 UniRef50_Q5LU39 Site-specific recombinase, phage integrase famil... 53 3e-05 UniRef50_B4WEQ1 Site-specific recombinase, phage integrase famil... 53 3e-05 UniRef50_C6VR10 Prophage Lp2 protein 2, integrase n=2 Tax=Lactob... 53 3e-05 UniRef50_C7TI65 Phage-related integrase n=1 Tax=Lactobacillus rh... 53 3e-05 UniRef50_A5EBE3 Putative phage related integrase n=1 Tax=Bradyrh... 53 3e-05 UniRef50_Q1QKD6 Phage integrase n=1 Tax=Nitrobacter hamburgensis... 52 3e-05 UniRef50_A1K6M5 Site-specific recombinase, phage integrase famil... 52 3e-05 UniRef50_C2EA79 Bacteriophage integrase n=2 Tax=Lactobacillus Re... 52 3e-05 UniRef50_C4XNE8 Site-specific recombinase n=1 Tax=Desulfovibrio ... 52 4e-05 UniRef50_C4Z093 Integrase/recombinase XerC n=18 Tax=Bacteria Rep... 52 4e-05 UniRef50_Q483M1 Site-specific recombinase, phage integrase famil... 52 4e-05 UniRef50_Q1GIK7 Phage integrase n=5 Tax=Rhodobacteraceae RepID=Q... 52 5e-05 UniRef50_C0GET2 Integrase family protein n=1 Tax=Dethiobacter al... 52 5e-05 UniRef50_A8LND4 Putative uncharacterized protein n=1 Tax=Dinoros... 52 5e-05 UniRef50_Q5X3B3 Putative uncharacterized protein n=2 Tax=Gammapr... 52 6e-05 UniRef50_A4TWM2 Phage integrase n=1 Tax=Magnetospirillum gryphis... 52 6e-05 UniRef50_C9RBE5 Integrase family protein n=1 Tax=Ammonifex degen... 52 6e-05 UniRef50_Q1MNY2 Integrase n=1 Tax=Lawsonia intracellularis PHE/M... 52 7e-05 UniRef50_A7ICY0 Integrase family protein n=14 Tax=Alphaproteobac... 52 7e-05 UniRef50_A0LQG0 Phage integrase family protein n=2 Tax=Deltaprot... 52 7e-05 UniRef50_B7H3T9 Phage integrase family protein n=9 Tax=Acinetoba... 52 7e-05 UniRef50_Q2NBN0 Site-specific recombinase, phage integrase famil... 51 7e-05 UniRef50_A7HHG2 Phage integrase family protein n=1 Tax=Anaeromyx... 51 7e-05 UniRef50_B6R7S7 Phage integrase family protein, putative n=1 Tax... 51 7e-05 UniRef50_C9A167 Integrase n=1 Tax=Enterococcus gallinarum EG2 Re... 51 8e-05 UniRef50_B8FGB9 Integrase family protein n=2 Tax=Desulfobacterac... 51 8e-05 UniRef50_B5KC37 Putative phage-related integrase n=1 Tax=Octadec... 51 8e-05 UniRef50_D2L4K8 Integrase family protein n=1 Tax=Desulfovibrio s... 51 8e-05 UniRef50_D2S8K7 Integrase family protein n=1 Tax=Geodermatophilu... 51 9e-05 UniRef50_B0KFC6 Integrase family protein n=5 Tax=Pseudomonas put... 51 9e-05 UniRef50_B9JF62 Tyrosine site-specific integrase/recombinase pro... 51 9e-05 UniRef50_B8D1P6 Phage integrase family protein n=1 Tax=Halotherm... 51 1e-04 UniRef50_A2SD71 Putative uncharacterized protein n=1 Tax=Methyli... 51 1e-04 UniRef50_B0PGN2 Putative uncharacterized protein n=2 Tax=Clostri... 51 1e-04 UniRef50_A5F3U5 Site-specific recombinase, phage integrase famil... 51 1e-04 UniRef50_C7H2F1 Prophage LambdaCh01, site-specific recombinase, ... 51 1e-04 UniRef50_C9MZG6 Integrase n=1 Tax=Leptotrichia hofstadii F0254 R... 51 1e-04 UniRef50_A5VH76 Phage integrase family protein n=1 Tax=Sphingomo... 51 1e-04 UniRef50_B3WDC1 Integrase n=3 Tax=root RepID=B3WDC1_LACCB 51 1e-04 UniRef50_C6XMJ6 Integrase family protein n=1 Tax=Hirschia baltic... 51 1e-04 UniRef50_C0EC03 Putative uncharacterized protein n=1 Tax=Clostri... 51 1e-04 UniRef50_Q38Y39 Site-specific recombinase, prophage lsa1 integra... 50 1e-04 UniRef50_C5SDU6 Integrase family protein n=1 Tax=Allochromatium ... 50 1e-04 UniRef50_A6GYU9 Tyrosine recombinase XerC n=7 Tax=Flavobacteria ... 50 1e-04 UniRef50_B1YGY2 Integrase family protein n=2 Tax=Exiguobacterium... 50 2e-04 UniRef50_A1RWD6 Phage integrase family protein n=1 Tax=Thermofil... 50 2e-04 UniRef50_B7RVJ7 Site-specific recombinase, phage integrase famil... 50 2e-04 UniRef50_Q1J1A0 Phage integrase n=1 Tax=Deinococcus geothermalis... 50 2e-04 UniRef50_Q2SP99 Integrase n=2 Tax=Gammaproteobacteria RepID=Q2SP... 50 2e-04 UniRef50_C6BRQ3 Integrase family protein n=1 Tax=Desulfovibrio s... 50 2e-04 UniRef50_C7T893 Phage integrase n=5 Tax=Lactobacillus RepID=C7T8... 50 2e-04 UniRef50_A3JR07 Phage integrase n=1 Tax=Rhodobacterales bacteriu... 50 2e-04 UniRef50_UPI0001C375B8 hypothetical protein RflaF_20511 n=1 Tax=... 50 2e-04 UniRef50_UPI00016C6969 site-specific tyrosine recombinase XerC n... 50 2e-04 UniRef50_UPI00016BFF50 integrase family protein n=1 Tax=Epulopis... 50 2e-04 UniRef50_D2LD60 Integrase family protein n=1 Tax=Rhodomicrobium ... 50 2e-04 UniRef50_C3WMN8 Phage integrase n=2 Tax=Fusobacterium RepID=C3WM... 50 3e-04 UniRef50_C4SWJ3 Phage integrase n=7 Tax=Gammaproteobacteria RepI... 50 3e-04 UniRef50_Q6MC32 Putative uncharacterized protein n=6 Tax=Parachl... 50 3e-04 UniRef50_A6P1X5 Putative uncharacterized protein n=2 Tax=Bacteri... 49 3e-04 UniRef50_UPI0001C4241D integrase/recombinase n=1 Tax=Bacillus ps... 49 3e-04 UniRef50_B0TQV5 Integrase family protein n=1 Tax=Shewanella hali... 49 3e-04 UniRef50_Q2W780 Integrase n=1 Tax=Magnetospirillum magneticum AM... 49 3e-04 UniRef50_C8X726 Integrase family protein n=1 Tax=Nakamurella mul... 49 3e-04 UniRef50_A3WZM1 Possible phage-related integrase n=1 Tax=Nitroba... 49 3e-04 UniRef50_D1RC05 Putative uncharacterized protein n=1 Tax=Parachl... 49 3e-04 UniRef50_D2RA91 Site-specific tyrosine recombinase XerC n=10 Tax... 49 3e-04 UniRef50_A1WTV4 Phage integrase family protein n=1 Tax=Halorhodo... 49 3e-04 UniRef50_C7Y7Z4 Lj965 prophage integrase n=1 Tax=Lactobacillus c... 49 3e-04 UniRef50_C6LKW3 Tyrosine recombinase XerD n=3 Tax=Clostridiales ... 49 3e-04 UniRef50_Q1VYR3 Putative site-specific recombinase n=1 Tax=Psych... 49 4e-04 UniRef50_C2E2T4 Bacteriophage integrase n=5 Tax=Lactobacillus Re... 49 4e-04 UniRef50_A5WEX8 Phage integrase family protein n=2 Tax=Psychroba... 49 4e-04 UniRef50_UPI0001C41B06 tyrosine recombinase XerC n=1 Tax=Methano... 49 4e-04 UniRef50_Q1MRZ7 Prophage DLP12 integrase (Fragment) n=1 Tax=Laws... 49 4e-04 UniRef50_Q65KT3 Lambda integrase-like protein(Phage related) n=1... 49 4e-04 UniRef50_A2RHC7 Phage integrase n=3 Tax=root RepID=A2RHC7_LACLM 49 4e-04 UniRef50_UPI00016C64E8 integrase/recombinase n=1 Tax=Clostridium... 49 4e-04 UniRef50_A1V9J7 Phage integrase family protein n=1 Tax=Desulfovi... 49 4e-04 UniRef50_A1SRZ5 Phage integrase family protein n=1 Tax=Psychromo... 49 5e-04 UniRef50_Q3JF08 Phage integrase n=2 Tax=Nitrosococcus oceani Rep... 49 5e-04 UniRef50_C7CCC6 Putative phage integrase n=1 Tax=Methylobacteriu... 49 5e-04 UniRef50_B1C1D6 Putative uncharacterized protein n=2 Tax=Clostri... 49 5e-04 UniRef50_Q1AUQ4 Phage integrase n=3 Tax=Rubrobacter xylanophilus... 49 5e-04 UniRef50_A7GRV3 Phage integrase family protein n=18 Tax=Bacillus... 49 5e-04 UniRef50_A0LEB8 Tyrosine recombinase xerC n=1 Tax=Syntrophobacte... 49 5e-04 UniRef50_A3V8A4 Possible phage-related integrase n=2 Tax=Rhodoba... 49 5e-04 UniRef50_A3VLD9 Phage integrase n=1 Tax=Rhodobacterales bacteriu... 49 5e-04 UniRef50_A2BN06 Possible integrase n=1 Tax=Hyperthermus butylicu... 49 6e-04 UniRef50_A3SHG9 Phage integrase n=1 Tax=Roseovarius nubinhibens ... 49 6e-04 UniRef50_C9CCW8 Site-specific recombinase n=1 Tax=Enterococcus f... 49 6e-04 UniRef50_A5ZEI3 Putative uncharacterized protein n=1 Tax=Bactero... 49 6e-04 UniRef50_A2RMC8 IntTn5276 protein n=2 Tax=Lactococcus lactis Rep... 48 6e-04 UniRef50_A9IGA6 Phage-related integrase n=50 Tax=root RepID=A9IG... 48 7e-04 UniRef50_B8J6Z7 Integrase family protein n=1 Tax=Anaeromyxobacte... 48 7e-04 UniRef50_B7R6R4 Site-specific recombinase, phage integrase famil... 48 7e-04 UniRef50_A1ZPB9 Tyrosine recombinase XerD n=4 Tax=Bacteroidetes ... 48 7e-04 UniRef50_B6QXT6 Phage integrase n=2 Tax=Pseudovibrio sp. JE062 R... 48 7e-04 UniRef50_D2LLC2 Integrase family protein n=2 Tax=Aciduliprofundu... 48 7e-04 UniRef50_B9XSZ3 Integrase family protein n=1 Tax=bacterium Ellin... 48 8e-04 UniRef50_B2KEQ8 Integrase family protein n=1 Tax=Elusimicrobium ... 48 8e-04 UniRef50_C1XUI9 Site-specific recombinase XerD n=1 Tax=Meiotherm... 48 9e-04 UniRef50_A6FWH8 Site-specific recombinase XerD-like protein n=1 ... 48 9e-04 UniRef50_B5IC76 Site-specific recombinase, phage integrase famil... 48 0.001 UniRef50_D2BJR0 Site-specific recombinase, phage integrase famil... 48 0.001 UniRef50_Q2W123 Integrase n=1 Tax=Magnetospirillum magneticum AM... 48 0.001 UniRef50_C5NYQ3 Tyrosine recombinase XerC n=1 Tax=Gemella haemol... 47 0.001 UniRef50_C7I5J5 Integrase family protein n=2 Tax=Thiomonas inter... 47 0.001 UniRef50_Q0FPA2 Probable site-specific integrase/recombinase n=2... 47 0.001 UniRef50_B5IZ03 Site-specific recombinase, phage integrase famil... 47 0.001 UniRef50_A8HXQ4 Phage integrase n=1 Tax=Azorhizobium caulinodans... 47 0.001 UniRef50_C2MBI5 Site-specific recombinase, phage integrase famil... 47 0.001 UniRef50_Q1NM52 Phage integrase n=1 Tax=delta proteobacterium ML... 47 0.001 UniRef50_Q2VZX9 Integrase n=1 Tax=Magnetospirillum magneticum AM... 47 0.001 UniRef50_Q6AMU1 Related to integrase/recombinase n=1 Tax=Desulfo... 47 0.001 UniRef50_D2L701 Integrase family protein n=1 Tax=Desulfovibrio s... 47 0.001 UniRef50_Q854V7 Gp41 n=1 Tax=Mycobacterium phage Che9c RepID=Q85... 47 0.001 UniRef50_C3XFN5 Phage integrase n=1 Tax=Helicobacter bilis ATCC ... 47 0.001 UniRef50_D1PRY2 Site-specific recombinase, phage integrase famil... 47 0.001 UniRef50_C6MS46 Integrase family protein n=1 Tax=Geobacter sp. M... 47 0.001 UniRef50_UPI0001BC31E8 phage integrase family protein n=1 Tax=Bu... 47 0.002 UniRef50_Q314D3 Integrase/recombinase n=5 Tax=Deltaproteobacteri... 47 0.002 UniRef50_Q03GP3 Integrase n=1 Tax=Pediococcus pentosaceus ATCC 2... 47 0.002 UniRef50_B0VFS7 Site-specific recombinase, phage integrase famil... 47 0.002 UniRef50_Q2LV83 Phage integrase family protein n=1 Tax=Syntrophu... 47 0.002 UniRef50_A4FXL1 Phage integrase family protein n=2 Tax=Methanoco... 47 0.002 UniRef50_A6CQV2 Integrase-recombinase protein n=1 Tax=Bacillus s... 47 0.002 UniRef50_C9LR41 Toxin-antitoxin system, toxin component, PIN fam... 47 0.002 UniRef50_C0XAL7 Possible bacteriophage integrase n=6 Tax=Lactoba... 47 0.002 >UniRef50_P71298 Putative prophage CP4-6 integrase n=7 Tax=Proteobacteria RepID=INTF_ECOLI Length = 466 Score = 961 bits (2485), Expect = 0.0, Method: Compositional matrix adjust. Identities = 466/466 (100%), Positives = 466/466 (100%) Query: 1 MFIPSIYLHQQLHYCKTAILNWSRKMALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTL 60 MFIPSIYLHQQLHYCKTAILNWSRKMALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTL Sbjct: 1 MFIPSIYLHQQLHYCKTAILNWSRKMALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTL 60 Query: 61 ACRATSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAV 120 ACRATSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAV Sbjct: 61 ACRATSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAV 120 Query: 121 KIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGES 180 KIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGES Sbjct: 121 KIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGES 180 Query: 181 KKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNY 240 KKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNY Sbjct: 181 KKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNY 240 Query: 241 QKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVL 300 QKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVL Sbjct: 241 QKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVL 300 Query: 301 LLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNK 360 LLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNK Sbjct: 301 LLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNK 360 Query: 361 EGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIM 420 EGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIM Sbjct: 361 EGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIM 420 Query: 421 GHKPSALAEKHYRRRPLDLLRKWHEKIETWILNEAGITIKNNVDMR 466 GHKPSALAEKHYRRRPLDLLRKWHEKIETWILNEAGITIKNNVDMR Sbjct: 421 GHKPSALAEKHYRRRPLDLLRKWHEKIETWILNEAGITIKNNVDMR 466 >UniRef50_B7D090 Phage integrase family protein n=1 Tax=Burkholderia pseudomallei 576 RepID=B7D090_BURPS Length = 449 Score = 423 bits (1088), Expect = e-117, Method: Compositional matrix adjust. Identities = 214/440 (48%), Positives = 286/440 (65%), Gaps = 18/440 (4%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIG 87 L+R FT R+R F P KQ F+WD+ L RAT+G+ ++VFQ AG T+R TIG Sbjct: 23 LARINFTAGRVRDFRCPPDAKQIFMWDSGAPGLGLRATAGSVSYVFQGRIAGNTVRTTIG 82 Query: 88 NINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYL 147 + W ID AR +AR LQ LID G DPR+ KA IA ++ + ESR+ + T AW+ Y+ Sbjct: 83 DARTWDIDGARQKARELQKLIDEGKDPRVEKAAAIAVTQARRVESRRHQATLDAAWKSYI 142 Query: 148 QELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRG-QGPTSAGPLASLLNLPLSELTP 206 R+ +S ++ADH +S RGGE +KRG + P G L+SLL++PL +LT Sbjct: 143 DVNRS--------RWSDHHVADHEKVSHRGGEMRKRGRKQPRVRGALSSLLDVPLPDLTA 194 Query: 207 DYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSA 266 D IA WL E ++RPT + A+RLLRA + W Q ++ G++P + + VR+ VP Sbjct: 195 DVIAEWLKRETESRPTQASLAFRLLRACLNWCAEQHEWSGLVPEHVCRTRKVRQNVPKVR 254 Query: 267 SKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMR 326 +K+D CLQ+EQL WF VR + NP+ SA+LQ LLLTGARREE+ L+W+D+DF+W++M Sbjct: 255 AKSD-CLQREQLAPWFDGVRQIANPVVSAFLQALLLTGARREEMNELKWTDLDFRWNTMM 313 Query: 327 IKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRS-NSKSGKIIEPRSAHNRAL 385 ++DK+EG+R IPLTPY+ LL L + + WVF S S SG++ P H L Sbjct: 314 LRDKVEGDRTIPLTPYMGLLLGALPR-------RNEWVFSSVKSGSGRLQAPDDRHRIVL 366 Query: 386 VLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHE 445 A L ++LHGLRRSF TL EW+E P G+VAQIMGHKPSA AEKHY++RP+DLLR WH Sbjct: 367 RAAHLEGLTLHGLRRSFSTLTEWIECPAGVVAQIMGHKPSATAEKHYKQRPIDLLRMWHT 426 Query: 446 KIETWILNEAGITIKNNVDM 465 KIE WILNEAGIT+ M Sbjct: 427 KIEAWILNEAGITLPATQQM 446 >UniRef50_Q2SV18 Phage integrase n=20 Tax=Betaproteobacteria RepID=Q2SV18_BURTA Length = 479 Score = 406 bits (1044), Expect = e-112, Method: Compositional matrix adjust. Identities = 224/465 (48%), Positives = 296/465 (63%), Gaps = 44/465 (9%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTI 86 ++++ FT ER+ + G++QT WD L R T SG K++VF+ GKT+R+TI Sbjct: 1 MTKENFTIERVTGYECTPGRQQTIYWDKKQQGLGLRVTASGVKSYVFEGRLFGKTVRITI 60 Query: 87 GNINDWKID----------------DARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQA 130 G+ N W ++ AR EA RL+ L+D GIDPR +A + AE E+ + Sbjct: 61 GSPNAWPLERHATTDAATGKTIERLGARQEAARLKALMDRGIDPREERAEQRAEHEARKL 120 Query: 131 ESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSA 190 ++ + T S AW YL R+ +S R+ DH L+ GG KRG+G T Sbjct: 121 DALRQNATVSEAWAAYLDAHRS--------KWSGRHYYDHEKLAQAGGLPWKRGRGTTIP 172 Query: 191 GPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPG 250 GPLA+L+ L L++L + +A WL E + RPT T +YR LRAFI+W + +Y G I Sbjct: 173 GPLATLMPLKLTDLNAERVAMWLEAEAEKRPTNTEQSYRKLRAFIRWCEDKPEYSGSIAP 232 Query: 251 DLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEI 310 + VR VP + +K+D CLQ+EQL WF+AVR ++NP+ SAYLQ LLLTGARREE+ Sbjct: 233 NAYAARAVRAAVPRTKAKSD-CLQREQLLVWFTAVRQIDNPVISAYLQGLLLTGARREEL 291 Query: 311 ASLRWSDVDFKWSSMRIKDKIEGE--RIIPLTPYVSELLNVLAQ----SPN----SDVNK 360 A+LRW DVDF+W S+ + DKIEG R IPLTPY++ LL L Q PN + + + Sbjct: 292 AALRWKDVDFRWRSLTMNDKIEGTGGRTIPLTPYLASLLTNLKQMNEIPPNRRQLASLTE 351 Query: 361 EG-------WVFRSN-SKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVP 412 +G WVF SN S+ GKI EPR AHN A+ A LPH++LHGLRRSFGTL+EWVEVP Sbjct: 352 KGKSWSPSEWVFTSNRSEDGKIAEPRKAHNSAIEAAGLPHLTLHGLRRSFGTLSEWVEVP 411 Query: 413 TGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWILNEAGI 457 G+VAQI GHKPSALAEKHYRRRPLDLLR WH+KIE+W+L +AG+ Sbjct: 412 VGVVAQIQGHKPSALAEKHYRRRPLDLLRMWHDKIESWMLQQAGL 456 >UniRef50_A4LPJ2 Phage integrase n=2 Tax=Burkholderia pseudomallei RepID=A4LPJ2_BURPS Length = 437 Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust. Identities = 203/435 (46%), Positives = 277/435 (63%), Gaps = 20/435 (4%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIG 87 ++R FT R+R F P KQ F+WDA + L RAT+G+ +F+FQ AG T+R TIG Sbjct: 1 MARINFTAGRVRDFRCPPDSKQVFMWDAGMPGLGLRATTGSVSFIFQGRIAGNTIRTTIG 60 Query: 88 NINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYL 147 ++ W ID AR +AR L+ LID G DPR+ KA + + + ES++ VT AW+ ++ Sbjct: 61 DVRAWDIDGARQKARELKKLIDEGKDPRVEKAAVLKAVQEQRVESQRRHVTLEDAWKAHI 120 Query: 148 QELRTGISAKTKRPYSTRYIADHINLSSRGGES---KKRGQGPTSAGPLASLLNLPLSEL 204 + R + ++D +S RGG++ KRG AG L LL++PLS L Sbjct: 121 EANRA--------RWGKHTLSDREKVSRRGGDAPKAGKRGGALRVAGALVGLLDVPLSGL 172 Query: 205 TPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPV 264 T D IA WL+ E RPT + A+RLLRA + W +K+ G++P + VR+ VP Sbjct: 173 TADTIADWLARETATRPTQASLAFRLLRACLNWCAEHEKWSGLVPERVCSTRKVRQHVPK 232 Query: 265 SASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSS 324 +K+D CLQ+EQL WFS VR + N S YLQ+LLLTGAR E+ ++W+DVDF+W++ Sbjct: 233 PRAKSD-CLQREQLAPWFSGVRGIGNAHYSTYLQMLLLTGARPGELLEVKWADVDFRWNT 291 Query: 325 MRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSN-SKSGKIIEPRSAHNR 383 + ++DKIEGER IPLTPYVS LL L + +N VF S SK+G++ P H+ Sbjct: 292 LNLRDKIEGERTIPLTPYVSSLLAALPR-----IND--LVFASTRSKTGRMKAPNVPHHA 344 Query: 384 ALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKW 443 L A + ++LHGLRRSF TL EW+E P G+VAQIMGHKPSA AEKHY++RP+DLLR W Sbjct: 345 VLEKAHIEGLTLHGLRRSFATLTEWIECPVGVVAQIMGHKPSATAEKHYKQRPIDLLRMW 404 Query: 444 HEKIETWILNEAGIT 458 H KIETW+LNEAG++ Sbjct: 405 HTKIETWMLNEAGVS 419 >UniRef50_Q82XM2 Phage integrase n=1 Tax=Nitrosomonas europaea RepID=Q82XM2_NITEU Length = 416 Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust. Identities = 206/437 (47%), Positives = 276/437 (63%), Gaps = 29/437 (6%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIG 87 L++ + T R+ T P Q FLWD LA RAT+G +AF+FQ +AGK++R+TIG Sbjct: 2 LTKVRLTPSRIAAHTCPADASQAFLWDTATPGLAVRATAGKRAFIFQGRFAGKSIRITIG 61 Query: 88 NINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYL 147 + W I+ AR AR LQ L+D G DPR+ K KIA ++R T AW DY Sbjct: 62 DTEVWTIEQARQRARELQGLVDQGRDPRLVKQEKIAA----DVQARITDEPALPAWRDY- 116 Query: 148 QELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQ---GP--TSAGPLASLLNLPLS 202 I+A++ + +S + ADH+ ++ GGE RG+ P T G L LL+LPL Sbjct: 117 ------IAARSGK-WSEAHAADHLKMARDGGEPVTRGRRIGAPAYTEKGILRPLLDLPLK 169 Query: 203 ELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMV 262 +T + +A WL E RP A LL F+ W Q Y+ + D +++ + Sbjct: 170 GITREKVAQWLDNEATRRPAQARLALSLLGTFLSWCGNQPAYRNQVNSDAC--AKLKREL 227 Query: 263 PVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKW 322 P ++ D CLQ+EQL SWF+AVRS++NP+ SAYLQ LLLTGARREE+A L W DVDF+W Sbjct: 228 PKPTARTD-CLQREQLASWFAAVRSIDNPVMSAYLQSLLLTGARREELAGLGWEDVDFQW 286 Query: 323 SSMRIKDKIE-GERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSN-SKSGKIIEPRSA 380 ++ + DK+E R IPLTPYVS+LL L + +N+ +VF S +KSG++ EPR A Sbjct: 287 QTIHLADKVEHSGRTIPLTPYVSQLLQSLPK-----INE--FVFASKRAKSGRLQEPRKA 339 Query: 381 HNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLL 440 HN+A+ A LP +S+HGLRRSF TL+EWVE P+GI AQIMGHKPSA+AE+HY+RRP+DLL Sbjct: 340 HNQAIEAAGLPPLSIHGLRRSFATLSEWVEAPSGITAQIMGHKPSAIAERHYKRRPVDLL 399 Query: 441 RKWHEKIETWILNEAGI 457 R WH KIE WIL+ A I Sbjct: 400 RVWHTKIEEWILSNANI 416 >UniRef50_Q6ARX0 Related to integrase n=5 Tax=Proteobacteria RepID=Q6ARX0_DESPS Length = 465 Score = 349 bits (895), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 199/439 (45%), Positives = 264/439 (60%), Gaps = 28/439 (6%) Query: 32 KFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQS---------VYAGKTL 82 + T R+R LP KKQ FLWD D L R T AK F+FQS + T Sbjct: 29 RLTLNRIRNAKLPPNKKQIFLWDEDAKGLGVRITGSAKVFIFQSRMLMPDKNGILKPSTF 88 Query: 83 RMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTK-VTFSV 141 R+ IG + ++DAR ARR + GIDPR A+ + AE E+ + + RK + VT Sbjct: 89 RIKIGGCDSVLLEDARNVARRYAAQVAEGIDPRQARQ-RTAENEATERQERKRQDVTIGK 147 Query: 142 AWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPL 201 AW Y++E R +ST+Y +DH + S GG+ KKRG+G T AGPLAS+ NLPL Sbjct: 148 AWPTYMEERRPN--------WSTKYYSDHERIISPGGKQKKRGKGLTVAGPLASIANLPL 199 Query: 202 SELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKM 261 S +T D I WL+ E+ RPT T A+ +LR F+ W K+Y G+ P + A ++K Sbjct: 200 SSVTADSIKKWLADEQPKRPTETRRAFEMLRTFLNWCEADKRYHGLAPPN-ACSAKIKKD 258 Query: 262 VPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFK 321 + DD LQ+EQL WF++VR N + SAY+Q+L L GARREE+ SL+WSDVDF+ Sbjct: 259 NLTKKNSRDDALQREQLSVWFASVRRYENKVLSAYVQMLFLIGARREELLSLKWSDVDFR 318 Query: 322 WSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSN-SKSGKIIEPRSA 380 W + I K R +PLTPYV+ LL+ L + + WVF S K G++ P A Sbjct: 319 WKKVHILGKGAVPRDLPLTPYVAALLSKLPR-------RNEWVFSSTRGKEGRLQSPTKA 371 Query: 381 HNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLL 440 + + AE+ I+LHGLRRSF TL+EW+E P GIV QI GH+PSA AEKHY++RP+DLL Sbjct: 372 FQKMMSRAEIDDITLHGLRRSFSTLSEWLETPVGIVYQIQGHEPSATAEKHYKKRPVDLL 431 Query: 441 RKWHEKIETWILNEAGITI 459 RKWH KIE WIL EAG+ + Sbjct: 432 RKWHIKIEAWILEEAGVEV 450 >UniRef50_A1WB37 Phage integrase family protein n=5 Tax=Burkholderiales RepID=A1WB37_ACISJ Length = 452 Score = 345 bits (886), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 197/442 (44%), Positives = 267/442 (60%), Gaps = 30/442 (6%) Query: 30 RQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAGKTLRMTIGN 88 R T + R P GK+Q F+ D++ L R T+ GAK+FV+++ +T+R TIG+ Sbjct: 15 RINLTAGAIDRLACPAGKQQAFMRDSEAPGLRVRVTAAGAKSFVYEAKLDRQTIRRTIGD 74 Query: 89 INDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQ 148 + W I+ AR EARRL ++D G DPR + + A+ + +A + VT W YL+ Sbjct: 75 VKLWSIEQARTEARRLAVVLDNGQDPREIERQQQADKAAAKATAAVQAVTVGEVWALYLE 134 Query: 149 ELRTGISAKTKRPY-STRYIADHINLSSRGGESKKRG---QGPTSAGPLASLLNLPLSEL 204 +RP+ R+ ADH+ L GGE KRG +G T AGPL L+ L L +L Sbjct: 135 ---------ARRPHWGARHHADHVKLVQVGGEVSKRGTRGRGVTVAGPLHPLMGLALRDL 185 Query: 205 TPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPG-DLAQDYNVRKMVP 263 T I AW + E Q RPT A+R L+AF+ W Q +Y +P + A+ R+ + Sbjct: 186 TAPVIEAWAAREAQTRPTSARLAWRCLKAFLSWCAEQSEYAPAMPSVNPAKTKKAREALG 245 Query: 264 VSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWS 323 + K D L KEQL +WF+AV+ + NPIA+AYLQVL+LTGAR E+ LRW DV+ KW Sbjct: 246 KAGVK-QDALLKEQLPAWFTAVQQIQNPIAAAYLQVLVLTGARPGEVLGLRWEDVNTKWK 304 Query: 324 SMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIE------P 377 + I+DK+EGER+IPLTPYVS LL+ L + + WVF S ++ GK E P Sbjct: 305 GLTIRDKVEGERVIPLTPYVSHLLHSLPR-------RSDWVFPSTAR-GKDTEGQTLSIP 356 Query: 378 RSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPL 437 R+ H A +A + ++LHGLRRSF +L EW+E+P G+VAQIMGHKPSA AEKHY RPL Sbjct: 357 RAPHTAACAVAGIEGLTLHGLRRSFKSLTEWLEIPAGVVAQIMGHKPSATAEKHYTVRPL 416 Query: 438 DLLRKWHEKIETWILNEAGITI 459 DLLR HE+IE WIL +AGI Sbjct: 417 DLLRVHHERIEAWILEQAGIVF 438 >UniRef50_C6MHB2 Integrase family protein n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MHB2_9PROT Length = 434 Score = 345 bits (885), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 187/433 (43%), Positives = 257/433 (59%), Gaps = 23/433 (5%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTIGNI 89 + FT +R+ F G KQ+ WD + L R T SGAK+++FQ+ +T+R+TIG+ Sbjct: 4 KNFTTDRVAGFKCKPGAKQSIYWDGKIPGLGLRVTASGAKSYIFQTEMHNRTIRLTIGDS 63 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESL----QAESRKTKVTFSVAWED 145 W I DA+ EA RL+ + D IDPR KA E+ +A+ + VT AW++ Sbjct: 64 RAWSISDAQDEATRLKVMTDQSIDPRQVKADAAVAKEAAEVARKAQGNRETVTVGRAWDE 123 Query: 146 YLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 Y+ + K + ++ DH+ GGE + R + T G LA L ++ L +LT Sbjct: 124 YVNVM--------KSTWGALHLHDHVRAMQSGGEQRTRSKKLTEPGTLAPLADMRLIDLT 175 Query: 206 PDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVS 265 + I AW E RP +A LL F+ W Y II + AQ V+K + Sbjct: 176 TERITAWAKVEGTKRPARARNARTLLSTFLNWCITHPTYSAIIASNPAQSKEVKKYLGKP 235 Query: 266 ASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSM 325 +SK +D LQ+EQL +WF+AV+ + NP+ SAYLQ LLLTGAR E+ +L W D+DF+W+S+ Sbjct: 236 SSK-NDALQREQLSAWFNAVKQIQNPVISAYLQTLLLTGARPNELITLCWEDIDFQWNSI 294 Query: 326 RIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRS-NSKSGKIIEPRSAHNRA 384 IKDK+EG R+IPLTPYV LL+ + + + W F S S SG ++EPR AH++A Sbjct: 295 TIKDKVEGLRVIPLTPYVGYLLSAMPR-------RNQWAFSSPTSASGHLVEPRIAHDKA 347 Query: 385 LVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWH 444 +A L ++LHGLRRSF +L EW+E P GI AQI GHKP + EKHY RRPLDLLR WH Sbjct: 348 CKIAGL-DVTLHGLRRSFASLCEWIETPAGIAAQIQGHKPQGVREKHYIRRPLDLLRVWH 406 Query: 445 EKIETWILNEAGI 457 KIE WIL +AGI Sbjct: 407 VKIEEWILEQAGI 419 >UniRef50_C6MJ55 Integrase family protein n=2 Tax=Betaproteobacteria RepID=C6MJ55_9PROT Length = 371 Score = 307 bits (786), Expect = 6e-82, Method: Compositional matrix adjust. Identities = 173/374 (46%), Positives = 236/374 (63%), Gaps = 24/374 (6%) Query: 92 WKIDDARAEARRLQTLIDTGIDPRIAKA----VKIAEAESLQAESRKTKVTFSVAWEDYL 147 W I +A+ EARRLQT+ID G DPR KA K A + +A+ + VT AW++Y+ Sbjct: 4 WTIGNAQIEARRLQTIIDQGNDPREVKADQYAAKTAATAAKKAQEEREIVTVGQAWKEYV 63 Query: 148 QELRTGISAKTKRP-YSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTP 206 ++P +S +I DH + GG+++KR + T G LA+L + L +LTP Sbjct: 64 ---------TARKPLWSELHIRDHEKVMQAGGDARKRSKKLTEPGSLATLAKIRLVDLTP 114 Query: 207 DYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSA 266 + + W TE RPT A RLLRAF+ W Y+ I+ + AQ+ + R+ + + Sbjct: 115 ELVTEWAQTEAMTRPTRARLALRLLRAFLNWCGRHSTYKAIVTSNPAQNNDARESLGKAK 174 Query: 267 SKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMR 326 K D LQ+EQL +WF A++ + NP+ SAYLQ+LLLTGARREEIASLRW D+DF+W S+ Sbjct: 175 VK-HDVLQREQLPAWFKAIKQIQNPVISAYLQILLLTGARREEIASLRWQDIDFQWKSLT 233 Query: 327 IKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNS-KSGKIIEPRSAHNRAL 385 I DK++ RIIPLTPYV+ LL+ L + + WVF S S SG++ +P AH +A Sbjct: 234 INDKVDDFRIIPLTPYVANLLSTLTR-------RNEWVFSSPSAASGRLTDPSIAHRKAC 286 Query: 386 VLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHE 445 +A L ++LHGLRRSF +L EW+E+P+GI AQI GHKP + E++Y RRPLDLLR WH Sbjct: 287 AIAGL-DLTLHGLRRSFASLCEWIEMPSGIAAQIQGHKPQGVREQNYIRRPLDLLRVWHV 345 Query: 446 KIETWILNEAGITI 459 KIE WIL EAGI Sbjct: 346 KIEEWILQEAGINF 359 >UniRef50_Q12DC0 Phage integrase n=1 Tax=Polaromonas sp. JS666 RepID=Q12DC0_POLSJ Length = 440 Score = 279 bits (713), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 169/438 (38%), Positives = 244/438 (55%), Gaps = 22/438 (5%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAK-AFVFQSVYAGKTLRMTI 86 ++R FT R+ F P K Q FLWDA L R T+ K ++VFQ Y KT+R+TI Sbjct: 1 MARIAFTAGRVAGFKCPPEKSQVFLWDAATPGLGLRTTAAGKPSYVFQGRYQEKTIRVTI 60 Query: 87 GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVA---- 142 G+ + W I A+ +AR LQ LID G DPR K +A +A + VA Sbjct: 61 GSPDAWSIPQAQEKARALQRLIDEGRDPRDLKRDAVAAGAERKAAAAAKVQADKVASLTV 120 Query: 143 ---WEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNL 199 W+ YLQE + K + + Y AD +++ GG KKRGQG T GP+ LL L Sbjct: 121 GEVWQTYLQEGKP----KRRDAWKPGYRADLELMATPGGVKKKRGQGLTRQGPIYPLLAL 176 Query: 200 PLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVR 259 ++E+ D + AW E A A+ + + F++W + + Y+ +I D + + Sbjct: 177 QMTEVNEDALKAWFDRESLAGKHQAARAFMMFKGFLRWCSARPAYRSLIDRDAGKAAAIV 236 Query: 260 KMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVD 319 + +P + + D L K Q++ W++ V L+N AS YL+ LLLTGARREE+A+L+W DVD Sbjct: 237 ENLPQATHRTDKLL-KGQVQGWWTGVEQLSNRTASVYLRALLLTGARREEVAALKWGDVD 295 Query: 320 FKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRS 379 F+W + + DK++ R IPL+PY++ +L L + +VF S SKSG I++ R Sbjct: 296 FQWRKLTLADKVDATRTIPLSPYMAHMLAGLPRV-------GAFVFASASKSGHIVDARD 348 Query: 380 AHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDL 439 + +A+ AE+ H++ HGLRR+F V VP GIVAQI GHK SA AE Y R LD Sbjct: 349 SMQKAVTEAEVGHLTFHGLRRTFTQTGRGV-VPAGIVAQIQGHKSSATAEG-YDIRTLDE 406 Query: 440 LRKWHEKIETWILNEAGI 457 L + E+IE IL+ AG+ Sbjct: 407 LSPYLEQIERHILSLAGV 424 >UniRef50_D0S9N1 Phage integrase n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0S9N1_ACIJO Length = 415 Score = 257 bits (657), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 154/428 (35%), Positives = 227/428 (53%), Gaps = 23/428 (5%) Query: 32 KFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTIGNIN 90 K T + R + K TF WD + T K+++FQ + R+ IG+++ Sbjct: 2 KLTKPAIDRIDCSDKDKPTFFWDEKTPGFGVKVTPKNNKSYIFQGRIGLQNRRIKIGDVD 61 Query: 91 DWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQEL 150 WK+DDAR A+ L + GIDP I + +A+ + L + ++ + F W +YL Sbjct: 62 VWKLDDARKYAQELAIMCHKGIDPLIERKKALADNKELLKQEKRKTIKFKDVWFEYL--- 118 Query: 151 RTGISAKTKRP-YSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 K ++P + R DHI LS RGG + TS P+ L LSELT + Sbjct: 119 ------KARQPNWRPRSYQDHIELS-RGGYDPENNSVYTSQ-PIFQLFEYKLSELTAGVV 170 Query: 210 AAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKA 269 WL RPT +A AYRL RAF+ W + Y+ ++P V+ VP +K Sbjct: 171 CDWLD-HNDFRPTTSAKAYRLTRAFLNWCEEHEDYENLVPLKSYNSKKVKDKVPSPKAK- 228 Query: 270 DDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKD 329 +DCL K+ LK WF V L + + +L L+TG R+ E+ SL+W+DVDF+W + +++D Sbjct: 229 NDCLMKQHLKPWFEEVNKLTSRKIAIFLICSLITGCRKNELLSLKWTDVDFRWKTAKVRD 288 Query: 330 KIEGE-RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRS-NSKSGKIIEPRSAHNRALVL 387 KIE E R+IPLT YV L L NSD ++F S +K G I+ P + + Sbjct: 289 KIEDEGRLIPLTAYVESLF--LELRKNSD---SKFIFSSKGAKCGHIVNPYDSLEKICKK 343 Query: 388 AELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKI 447 + ++ HGLRRS+ TLA W ++ G +AQI GHKPSAL E+HY RP+D+LR+ ++ Sbjct: 344 LNI-ELTPHGLRRSYKTLAIWAKINEGSLAQISGHKPSALVERHYIVRPMDMLRETLQEY 402 Query: 448 ETWILNEA 455 E WIL + Sbjct: 403 EDWILQQV 410 >UniRef50_B9ZR50 Integrase family protein n=2 Tax=Gammaproteobacteria RepID=B9ZR50_9GAMM Length = 424 Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 119/443 (26%), Positives = 193/443 (43%), Gaps = 80/443 (18%) Query: 44 PEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEAR 102 P K TF+WD+ V R T+ GAKAFV+Q G++ R+TIG ++ ARAEA+ Sbjct: 17 PPEKGTTFIWDSAVAGFGLRVTAAGAKAFVWQGRVNGRSQRLTIGKPGALTVEKARAEAK 76 Query: 103 RLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPY 162 R+ + +G DPR K + +A +L+ R+ + Sbjct: 77 RIAGEVASGKDPRAEKHARKVKALTLREAVREYR-------------------------- 110 Query: 163 STRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPT 222 R++AD R + L+ + P++E+T D +A ++ P Sbjct: 111 DARHLAD-----------TTRDSFDRAMKALSDWMARPVTEITRDMVARRHRKLGEDSPA 159 Query: 223 VTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKA-------DDCLQK 275 A+R LRA + ++ Y P L D V+++ SA+KA +++ Sbjct: 160 FANLAFRYLRAVLNHASEAHAYPDGRP--LLPDNPVKRL---SATKAWYRVDRRRTYIER 214 Query: 276 EQLKSWFSAVRSLNNP------------------IASAYLQVLLLTGARREEIASLRWSD 317 +L+ W AV+ L +P IA VL+LTG RR E LRW D Sbjct: 215 HELRPWMQAVQGLAHPPEREPGEGKTKPKLRNGAIARDVFMVLVLTGLRRNEALGLRWED 274 Query: 318 VDFKWSSMRIKD-KIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIE 376 V F ++ I D K +PL+ Y+ ELL Q + +VF S++ + Sbjct: 275 VSFAGRTLTIPDPKNYQPHTLPLSDYLVELLKARQQESGGE-----YVF-SDAAGTRFQN 328 Query: 377 PRSAHNRALVLAELPHISL--HGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRR 434 R A +R +AE+ + H LRR+F T+AE ++VP V ++ HK + Y + Sbjct: 329 LRYAVDR---VAEVSGVRAMPHDLRRTFATVAESLDVPAYAVKALLNHKTTGDVTAGYIQ 385 Query: 435 RPLDLLRKWHEKIETWILNEAGI 457 + LR ++I ++L G+ Sbjct: 386 MTPERLRGPMQRITDFMLAAGGL 408 >UniRef50_B7S183 Site-specific recombinase, phage integrase family n=2 Tax=Proteobacteria RepID=B7S183_9GAMM Length = 421 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 125/446 (28%), Positives = 200/446 (44%), Gaps = 63/446 (14%) Query: 30 RQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAGKT---LRMT 85 R FT RL R PEGKK +++D V+ LA TS G K F+ GK ++ Sbjct: 4 RFNFTKSRLERLDCPEGKKLHYVYDEAVSGLAMYVTSAGTKKFLVYRKAKGKGNKPVKRG 63 Query: 86 IGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWED 145 +G +D+ARA A + ++ G +P E+E E+R+ K+T ++ Sbjct: 64 LGKFPAMSVDEARAGAIDAISQLNKGKNPN--------ESER---EARRLKITLDDVFKA 112 Query: 146 YLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 YL E +S T Y +N + +SK+ LS + Sbjct: 113 YLAERGNQLSENTVSNYKG-----VVNKHLKDWKSKQ------------------LSSIN 149 Query: 206 PDYIA---AWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMV 262 D +A A +S E Q+ T R+LRA ++N Y+ L D V+++ Sbjct: 150 RDLVAKKHAKISKESQSAANKTM---RVLRALFNYAN--GAYESSDGRSLFPDNPVQRLT 204 Query: 263 PVSA----SKADDCLQKEQLKSWFSAVRSLNNP------IASAYLQVLLLTGARREEIAS 312 + D+ +++ QL+SWF AV L+ YLQ +LLTG RR E S Sbjct: 205 HTRTWNREERRDNTIKRTQLESWFKAVLKLSESEDEFERTVGDYLQFVLLTGLRRREATS 264 Query: 313 LRWSDVDFKWSSMRIK-DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKS 371 L+ +DVDFK S I K +P++ Y +LL + +++ ++F S Sbjct: 265 LKVADVDFKERSFTIYLTKNHQPLSLPMSDYTLKLLKRRCDTTSTE-----YIFHGTGSS 319 Query: 372 GKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKH 431 G++ +PR N V +E+ ++H LRR+F TLAE ++V + +++ H P Sbjct: 320 GRLNDPRRLINTLRVSSEVD-FTIHDLRRTFITLAESLDVSAYALKRLVNHSPGGDVTAG 378 Query: 432 YRRRPLDLLRKWHEKIETWILNEAGI 457 Y R ++ LRK + I +IL A + Sbjct: 379 YIRMDVERLRKPTQDINDYILKLAKV 404 >UniRef50_C0VG60 Phage integrase n=2 Tax=Acinetobacter RepID=C0VG60_9GAMM Length = 160 Score = 124 bits (311), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 67/157 (42%), Positives = 99/157 (63%), Gaps = 8/157 (5%) Query: 301 LLTGARREEIASLRWSDVDFKWSSMRIKDKIEGE-RIIPLTPYVSELLNVLAQSPNSDVN 359 L+TG R+ E+ SL+W+DVDF+W + +++DKIE E R+IPLT YV L L NSD Sbjct: 5 LITGCRKNELLSLKWTDVDFRWKTAKVRDKIEDEGRLIPLTAYVESLF--LELRKNSD-- 60 Query: 360 KEGWVFRS-NSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQ 418 ++F S +K G I+ P + + + ++ HGLRRS+ TLA W ++ G +AQ Sbjct: 61 -SKFIFSSKGAKCGHIVNPYDSLEKICKKLNI-ELTPHGLRRSYKTLAIWAKINEGSLAQ 118 Query: 419 IMGHKPSALAEKHYRRRPLDLLRKWHEKIETWILNEA 455 I GHKPSAL +HY RP+D+L++ ++ E WIL + Sbjct: 119 ISGHKPSALVVRHYIVRPMDMLQETLQEYEDWILQQV 155 >UniRef50_C6KUG0 Tyrosine recombinase n=1 Tax=uncultured bacterium RepID=C6KUG0_9BACT Length = 427 Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 122/429 (28%), Positives = 188/429 (43%), Gaps = 57/429 (13%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIG 87 ++R + T +R+RR +G Q FL+D D+ LA RAT GAKAFVF+ +T+R+TIG Sbjct: 1 MNRTRLTPDRIRRLACTDG--QAFLFDTDMQRLAVRATKGAKAFVFEGYLNRRTVRITIG 58 Query: 88 NINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKV--------TF 139 + DW +D AR EARRLQTLID G+DPR KA + + +A T Sbjct: 59 AVQDWTLDAARKEARRLQTLIDRGVDPREQKAAEREARAARKAAEAAACRAADEARRYTL 118 Query: 140 SVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNL 199 + Y LR K+ R + + KR P LL Sbjct: 119 GALLDAYTGHLRARGKTKSARDAAGAF---------------KRHLPP-------RLLMQ 156 Query: 200 PLSELTPDYIAAWLSTERQNRPTVTAHAYR--LLRAFIKWSNYQKKYQGIIPGDLAQ--- 254 P +T +AA + ++ T A R LL AF + ++ +P +L Sbjct: 157 PAKGITSRELAAVVRAVHESGKTRMAGVLRSYLLAAF--NAARHAEFDTSLPAELIGFEV 214 Query: 255 DYNVRKMV-PVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASL 313 N ++V P+ + D L +L+++ + + ++P A LL G R ++ L Sbjct: 215 TANPAELVKPIPVGRRDRVLSLAELRAYVAHLG--DDPTDCALRLALLAGGQRMAQL--L 270 Query: 314 RWSDVDFKWSSMRIKD-----KIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSN 368 R + D+ +++R+ D E ++PL P +EL LA S W+F Sbjct: 271 RATVNDWDGATLRLTDPKGRRSTPREHLLPLAPLAAELAGRLATRARS--RGVPWLF--- 325 Query: 369 SKSGKIIEPRSAHNR-ALVLAEL--PHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPS 425 S K ++P + R A + A L L +RR+ TL + V AQ++ H S Sbjct: 326 SHGTKPMDPATPGKRVAEISARLNGEPFDLRDIRRTCETLLAGLGVSRDTRAQLLSHGLS 385 Query: 426 ALAEKHYRR 434 + HY R Sbjct: 386 GVQAAHYDR 394 >UniRef50_Q3J8Z8 Phage integrase n=2 Tax=Nitrosococcus oceani RepID=Q3J8Z8_NITOC Length = 406 Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 117/440 (26%), Positives = 183/440 (41%), Gaps = 55/440 (12%) Query: 25 KMALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGA-KAFVFQSVYAGKTLR 83 K A R K T + R P + Q F WD+ + R ++G K+FV Q G+ R Sbjct: 2 KPAPQRTKLTKTVVDRLPAPT-RGQAFYWDSALPCFGVRVSAGGVKSFVIQKRIQGREKR 60 Query: 84 MTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAW 143 +T+G + AR EA RL I G +P AE QA+ R VT A Sbjct: 61 ITLGKYGHLTLMQARKEAARLLGEIAVGRNPL---------AEKAQAKLRA--VTLGEAL 109 Query: 144 EDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSE 203 E YL T RP R I +G T + + PL+ Sbjct: 110 EHYL----------TSRPLKARTI---------------QGTRHTMGKCFSDWMKRPLTS 144 Query: 204 LTPDYIAA---WLSTERQNRPTVTAHAYRLLRAFIKWS--NYQKKYQGIIPGDLAQDYNV 258 +T D +AA L T ++ + A R LRA ++ +Y + D + Sbjct: 145 ITRDKVAARHKQLGTASKSHANL---AMRYLRAVFNFAMADYTDNEGRPVIADNPVNRLS 201 Query: 259 RKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDV 318 + ++ +LK W AV+ L N A Y ++LLTG RR E +LRW +V Sbjct: 202 EARTWFRVERRRTVIKSHELKPWMQAVQRLENGAARDYFMLVLLTGLRRTEALNLRWQNV 261 Query: 319 DFKWSSMRIKD-KIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEP 377 D +++ ++D K +PL+ Y++E+L + S+ R ++ G + E Sbjct: 262 DLVANTLTVQDTKNHQAHTLPLSDYLTEMLAARLEDTYSEYVFSTSRGRLSNLRGPLAEV 321 Query: 378 RSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPL 437 RS + S+H LRR+F T+A+ ++VP V ++ HK + Y Sbjct: 322 RSYAGISF--------SIHDLRRTFATVADSLDVPGYAVKALLNHKAANDVTAGYIVVDT 373 Query: 438 DLLRKWHEKIETWILNEAGI 457 + LR +KI ++L G+ Sbjct: 374 ERLRAPMQKITDFMLRAGGL 393 >UniRef50_Q5P4X3 Phage-related integrase n=2 Tax=Betaproteobacteria RepID=Q5P4X3_AZOSE Length = 453 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 90/321 (28%), Positives = 156/321 (48%), Gaps = 48/321 (14%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIG 87 + R++ T +R+RRF P+G KQ FLWD LA RAT+GAK+++F++ +T+R TIG Sbjct: 1 MQRERLTPDRIRRFNCPDGTKQAFLWDTVAPRLAVRATAGAKSYIFEAKLNRQTIRRTIG 60 Query: 88 NINDWKIDDARAEARRLQTLIDTGIDPR-----------IAKAVKIAEAESLQAESRKTK 136 ++ W +DDARAEA RLQ L+++G DPR AKA + A + SR T Sbjct: 61 DVRAWNLDDARAEANRLQVLVESGTDPRELDRQEAEAKAAAKAAQEAAKRTADERSRYTL 120 Query: 137 VTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASL 196 A+ +L+ SA R ++ H +++ Sbjct: 121 RALCDAYTGHLERTGKDKSAAATRSAFKCHVFTHETIAA--------------------- 159 Query: 197 LNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWS-NYQKK--YQGIIPGDL- 252 P E+T IAA + R+ R A +LR+++ + N K+ + +P DL Sbjct: 160 --APAREVTSHQIAAMV---RKVREAGKERAAGILRSYLSAAFNAAKRAPFDSAMPADLI 214 Query: 253 --AQDYNVRKMVPVSASKADD-CLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARR-E 308 ++N +P A +A + L ++L+++ +++L + + L++ LL G +R Sbjct: 215 AFGIEHNPVDNIPAIAVQAGNRTLSADELRAY---IKALGDELPDQALRLALLAGGQRMA 271 Query: 309 EIASLRWSDVDFKWSSMRIKD 329 ++ + SD D +++R+ D Sbjct: 272 QLLRAKVSDYDADTATLRLWD 292 >UniRef50_Q5ZWK0 Phage related integrase n=15 Tax=Proteobacteria RepID=Q5ZWK0_LEGPH Length = 414 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 105/412 (25%), Positives = 189/412 (45%), Gaps = 50/412 (12%) Query: 53 WDADVTTLACRATSG-AKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTG 111 +D ++ R TSG AKAF + K R+T+G+ + + A+ +A L I G Sbjct: 28 YDDNLKGFGIRVTSGGAKAFFVEKFINKKRCRITLGHYPELTAEMAKNKALHLLGQIAMG 87 Query: 112 IDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHI 171 IDP IAE ++ + +T + ++DYL +T++ R I ++ Sbjct: 88 IDP-------IAEKKATEVRD----ITLNQVFKDYL---------RTRKNLKPRTIDNYT 127 Query: 172 NLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTAH-AYRL 230 ++ + K P+ +T D IA + A+ A R+ Sbjct: 128 HILDKAFTHWKSK---------------PMLSITRDRIAKYHEKLGNEHGEAYANLAMRI 172 Query: 231 LRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSA----SKADDCLQKEQLKSWFSAVR 286 LRA ++ Q Y+ L D V+++ A K ++ +L +W+++++ Sbjct: 173 LRALFNFAAGQ--YEDNSGHSLFIDNPVKRLSQTRAWYRIEKRKTYIKSHELAAWYTSLQ 230 Query: 287 SLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGE-RIIPLTPYVSE 345 + N YL ++LLTG RR+E A+L+WSD+D K + I E +PL+ ++ + Sbjct: 231 EIQNVTLRDYLLLILLTGLRRQEAATLKWSDLDLKAKTFTINTTKNNESHTLPLSDFLYD 290 Query: 346 LLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTL 405 LL + +D ++F + +G IIEPR + + + H ++H LRR+F T+ Sbjct: 291 LLIARKEKAIND-----YIFPGSGTAGHIIEPRKTMAHVIKNSGV-HFTVHDLRRTFITI 344 Query: 406 AEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWILNEAGI 457 AE +++P + ++M HK S+ Y ++ LRK + I +IL G+ Sbjct: 345 AESLDIPAYALKRLMNHKMSSDVTAGYIIVDVERLRKPMQLITDYILKCVGV 396 >UniRef50_A1AQX4 Phage integrase family protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AQX4_PELPD Length = 389 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 105/425 (24%), Positives = 178/425 (41%), Gaps = 61/425 (14%) Query: 44 PEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEAR 102 P KQ +WDA+ A R + G K F GK +R T+G + +D AR A Sbjct: 17 PVAGKQFDVWDAEQPRFAVRVSPRGRKTFFVMRRVKGKLVRATVGTFPEMNVDTARKMAA 76 Query: 103 RLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQEL-RTG-ISAKTKR 160 + + G++P I E + +A+ + S ++ YL + G I A TK Sbjct: 77 EMLVSMTAGVNPNI-------ERKRERAQQKDKSRLLSAVFDSYLASGGKDGDIKASTKA 129 Query: 161 PYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAW-LSTERQN 219 Y + + +R L L + E+ + + +S + Sbjct: 130 AYRSAF---------------RR---------LEKWQELKIDEIESEMVEQLHVSIVKDC 165 Query: 220 RPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLK 279 H+ LLRA +K++ + G+ A D K P + + E + Sbjct: 166 GGYAANHSIGLLRALMKFAKVE--------GNPAADVAWAKETP-----RREAMPPEAIP 212 Query: 280 SWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERI-IP 338 + A+ L S +VLL TG R+ E LRW D+D + S+ I++ G + IP Sbjct: 213 GFLKALDQLKGDNGSDLFRVLLFTGMRKSEAMGLRWIDIDLENKSLHIEETKTGPPLNIP 272 Query: 339 LTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNR--ALVLAELPHISLH 396 ++ +++ +L + +S WVF SNS+ G + + AL + PH+ Sbjct: 273 ISGHLAAILEKRKERISSP-----WVFPSNSRVGHLTNDQQFCRELAALGVRVYPHL--- 324 Query: 397 GLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWILNEAG 456 LR++F T+A + +P +V + GH P + +HY + LR E + IL+ AG Sbjct: 325 -LRKTFTTIAASL-IPGAMVDCLTGHVPQDVTGRHYTFPSVGQLRPHTEAVTKEILSLAG 382 Query: 457 ITIKN 461 IT ++ Sbjct: 383 ITTRS 387 >UniRef50_Q5P749 Similar to phage-related integrase n=3 Tax=Bacteria RepID=Q5P749_AZOSE Length = 411 Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 112/457 (24%), Positives = 185/457 (40%), Gaps = 81/457 (17%) Query: 29 SRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAF-VFQSVYAGKTLRMTI 86 +R FT ERL P+ K+ D T L R + +G K+F V++ + AG+ R+T+ Sbjct: 6 TRFPFTKERLAALPTPDAGKRDTYHDTKTTGLQLRVSATGVKSFSVYRRLKAGQPERVTL 65 Query: 87 GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQ--AESRKTKVTFSVAWE 144 G ++ AR A + I++G +P K AE + AE +AW Sbjct: 66 GKFPAMTVEQARKAAALVNAEIESGANPAATKRAFKAEPTLTEFFAEYGTRHGEKKLAWP 125 Query: 145 DYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSEL 204 +Q R D++ Q P + N LSE+ Sbjct: 126 ADVQRFR-----------------DYL-------------QKP--------MGNKRLSEI 147 Query: 205 TPDYIAAWLS-TERQNRPTVTAHAYRLLRA-----FIKWSNYQKKYQGIIPGDLAQDYNV 258 IA LS E+ + T R L + ++W D+N Sbjct: 148 DRAMIAKALSDAEKAGKSVATVRNIRALASGVFGKAVEWGRL--------------DFNP 193 Query: 259 RKMVPVSASKA--DDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWS 316 + V V+ K D LQ ++L +F+AV ++ + ++ + LLTGARR + ++ W Sbjct: 194 AQGVKVAGKKVSRDRFLQADELPRFFAAVAEEDDTMRD-FILLALLTGARRANVCAMHWH 252 Query: 317 DVDFKWSSMRIKDKIEGE-RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKII 375 ++D RI GE + + L P +L D G+VF ++G ++ Sbjct: 253 ELDLAAGVWRIPRTKNGEPQTVTLCPEAVMILEA-----RKDATGGGFVFPGTGRTGHVV 307 Query: 376 EPRSAHNRALVLAELPH-------ISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALA 428 EP+ A R + A +P+ +LH LRR+ G+ I+ + + HK S A Sbjct: 308 EPKKAVERVMARAGIPYGRDVPNGATLHDLRRTLGSWQARTGASLAIIGKSLNHK-SQQA 366 Query: 429 EKHYRRRPLDLLRKWHEKIETWILNEAGITIKNNVDM 465 Y R LD +R+ + +L AG +K+ D+ Sbjct: 367 TAIYARLDLDPVRQSVNTATSAMLEAAG--LKDGADV 401 >UniRef50_Q129B4 Phage integrase n=1 Tax=Polaromonas sp. JS666 RepID=Q129B4_POLSJ Length = 387 Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 107/431 (24%), Positives = 183/431 (42%), Gaps = 57/431 (13%) Query: 31 QKFTFERLRRFTLPE---GKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAGKTL-RMT 85 +KF F + R LP GK+ + D + L R +S G K + + G L R+T Sbjct: 3 EKFRFTKPRIEALPPALPGKRDEYR-DEALPGLWLRVSSAGVKTYAVLARKKGGALERVT 61 Query: 86 IGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWED 145 IG + ++AR +A+++ + TG+ + + A +++ + TF+ D Sbjct: 62 IGTADKLTPENARDKAKKIIADLATGV------------SHAASARAKRGETTFAELLTD 109 Query: 146 YLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 YL T + ++ Y Y H+ A L LS+++ Sbjct: 110 YLSN--TTMKPRSLEAYQWLY-KKHVE---------------------ADLGKRKLSDVS 145 Query: 206 PDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVS 265 + I A ++ PT +++A W+ + Y G P +V+K S Sbjct: 146 VERIRALHKKISKDTPTTANRCVSMVKAAFNWALKEGTYTGANPAG-----HVKKNTETS 200 Query: 266 ASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSM 325 ++ LQ +L +F A+ P A ++ + LLTGARR + ++RW+D+ + Sbjct: 201 RTR---YLQPAELAIFFQALEESEEP-AKSFFMLCLLTGARRANVLAMRWADISLEDGIW 256 Query: 326 RI--KDKIEGERI-IPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHN 382 RI D GE + IPL P E + +L + + WVF ++SK+G EP+ A Sbjct: 257 RIPAGDAKAGEEMNIPLVP---EAVTLLTRLKIEVADTSPWVFPADSKTGHYQEPKRAWA 313 Query: 383 RALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRK 442 + L + +H LRR+ G+ T I A+ +GHK A + R +D +R Sbjct: 314 TLRRRSGLADLRIHDLRRTMGSWLVRTGANTAINAKALGHKSMQAAAVYQRIADVDPVRD 373 Query: 443 WHEKIETWILN 453 EK T + Sbjct: 374 AMEKATTAFMG 384 >UniRef50_A6X736 Phage integrase family protein n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X736_OCHA4 Length = 420 Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 97/402 (24%), Positives = 166/402 (41%), Gaps = 39/402 (9%) Query: 49 QTFLWD---ADVTTLACRATSGAKAFVFQSVYAGKTLRMTIGNIND-WKIDDARAEARRL 104 T LWD V R A+ F+ + G++ M+IG W ++ AR EA+RL Sbjct: 14 DTILWDDGRGSVAGFGVRRQRVARVFILKYSVRGRSRWMSIGKYGSPWTVETARLEAKRL 73 Query: 105 QTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTG-ISAKTKRPYS 163 L+ +G DP A+ + S + +T + +DY++ R G I + RP Sbjct: 74 LGLVASGGDPAAARD---------EQRSAEGPLTVAELCDDYMKAARAGAILTRFHRPKK 124 Query: 164 TRYIADHINLSSRGGESKKRGQGPTSAGPLAS-LLNLPLSELTPDYIAAWLSTERQNRPT 222 + + R K G + S ++ + ++T A + T + R Sbjct: 125 ESTLQIDVGRIER---HIKPLIGKKHVIEVDSKVVKRLIHDITVGKTATSIKTGTRGRAI 181 Query: 223 VTAHA------YRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKE 276 VT A LL + W+ +G+I + + VR+ + ++ + Sbjct: 182 VTGGAGSAARVADLLSGIMTWA----VDEGLIRDNPV--HRVRRYRGQPRQRFLSEVELK 235 Query: 277 QLKSWFSAVRSLNNPIASAY----LQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIE 332 QL SA R N Y + +L+LTG R EIASLRWS+VD +R+ D Sbjct: 236 QLGKVLSAGRDCNEKAIHRYALTVVHLLVLTGCRLNEIASLRWSEVDLSQRCLRLGDTKT 295 Query: 333 GERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPH 392 G+ + + +++L+ + + SD WVF G + R AEL + Sbjct: 296 GQSLRAIGSAATKILSNIDKLSGSD-----WVFPGARGDGPYQGTKREAARIFQTAELDN 350 Query: 393 ISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRR 434 ++ H LR ++ + A G +A ++GHK + ++ R Sbjct: 351 VTCHTLRHTYASFASGCGYSDGTIAGLLGHKGRGVTSRYIHR 392 >UniRef50_B5S678 Integrase protein n=1 Tax=Ralstonia solanacearum RepID=B5S678_RALSO Length = 437 Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 91/335 (27%), Positives = 154/335 (45%), Gaps = 42/335 (12%) Query: 30 RQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAGKTLRMTIGN 88 R T + R P+GK Q FL D++ +L R T+ GAK+FVF++ GKT+R TIG Sbjct: 15 RVALTAGHIERLKCPDGKDQAFLRDSEAPSLRVRVTAAGAKSFVFEAKLRGKTIRTTIGA 74 Query: 89 INDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSV-----AW 143 + W I+ ARAEARRL +D GIDPR + + EAE+ + ++RK F++ + Sbjct: 75 VQSWTIEAARAEARRLSVTVDCGIDPR-EQLREAIEAENRERDARKRAEHFTLRRLLTDY 133 Query: 144 EDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSE 203 DYL++ K + +H+ + P + + Sbjct: 134 ADYLEQ-----QGKPSHRDARSIFKNHVFI------------------PWPTTCKMAACI 170 Query: 204 LTPDYIAAWLSTERQNRPTVTAHAYR--LLRAF---IKWSNYQKKYQGIIPGDLAQDYNV 258 +T +A ++ + TA+ R ++ AF I S+ K L + Sbjct: 171 VTHHEVAMFMRKAMDKGHSRTANKLRSFMMAAFQVAITASSNPKTPLCFHGYGLTSNPAA 230 Query: 259 RKMVPVSASKAD-DCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARR-EEIASLRWS 316 + SA++ D + L ++L+S++ A++ L I A L++ LLTG +R E++ +LR + Sbjct: 231 ATVPDDSANQPDKNPLSLQELRSYWQAIKDLEG-IRGAALRLHLLTGGQRIEQLVTLRTA 289 Query: 317 DVDFKWSSMRIKDKIEGE----RIIPLTPYVSELL 347 V ++ G+ +PL P +E L Sbjct: 290 KVAETEITLFDGKGRPGKPPRPHTVPLIPLAAEAL 324 >UniRef50_C6BFQ2 Integrase family protein n=4 Tax=Betaproteobacteria RepID=C6BFQ2_RALP1 Length = 412 Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 103/405 (25%), Positives = 160/405 (39%), Gaps = 61/405 (15%) Query: 33 FTFERLRRFTLPEGKKQTFLWDADVTTLACR-ATSGAKAFVFQSVYAGKTLRMTIGNIND 91 FT + +PE K + +D V+ LA SG + FV K R+ IG D Sbjct: 15 FTKAAIEALPVPE-KGWKYYYDTKVSGLAIGIGASGVRTFVLYRKVNRKPERIKIGRYPD 73 Query: 92 WKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDY----- 146 ++ AR +A L I TG +P K ++ AE +TF ++ Y Sbjct: 74 LTVEKARTQAMALNGEIATGTNPAELKRIRRAE------------MTFGDLFDQYYKNHS 121 Query: 147 LQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSE--L 204 L +T K K D +NL+SR + S +A L E + Sbjct: 122 LPNKKTSDEDKQKFDQYLSSNRDGVNLASRQLSA-------ISKADIAQLFGKISMEHKI 174 Query: 205 TPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWS--NYQKKYQGIIPGDLAQDYNVRKMV 262 T + + A +S+ + I+W N QGI N R Sbjct: 175 TANRVLALVSS--------------IFGKAIEWGIWNQMNPCQGI----RRNRENSR--- 213 Query: 263 PVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKW 322 D L ++L +F V + N Y+ V LLTGARR + ++RW DV+ + Sbjct: 214 -------DRFLHPDELPKFFEHVLAYPNATLRDYMLVSLLTGARRSNVLAMRWEDVNLER 266 Query: 323 SSMRIKDKIEGE-RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAH 381 + RI + G + +PL P LL + P + +VF KSG ++EP+ A Sbjct: 267 AEWRIHETKNGTPQSVPLVPDAVALLRNRQEMP--ECEDSPFVFPGTGKSGHLVEPKKAW 324 Query: 382 NRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSA 426 L A + + LH LRR+ G+ ++ + + HK +A Sbjct: 325 KIVLTQAGIKDLRLHDLRRTMGSWQAGTGANLSVIGRSLNHKSTA 369 >UniRef50_C6RMM9 Integrase n=1 Tax=Acinetobacter radioresistens SK82 RepID=C6RMM9_ACIRA Length = 432 Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 94/383 (24%), Positives = 166/383 (43%), Gaps = 42/383 (10%) Query: 54 DADVTTLACRATSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGID 113 D+++ A R + K ++ + G+T+R T+G + + AR AR + GI+ Sbjct: 39 DSELIGFAVRVNNSYKTYIVEKKVLGRTVRSTLGLHGNITLAQAREMAREKLLQMSQGIN 98 Query: 114 PRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINL 173 P K KI++ E + + K K T A+++Y+ S KT +P + I D+ + Sbjct: 99 PNDEKKKKISD-EDDRVKLEKQKPTVKEAFQNYM-------SLKTLKP---KTIDDYTTV 147 Query: 174 SSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRA 233 + L N L E++ I + +N A R+ RA Sbjct: 148 IDKY---------------LEDWQNFKLDEISRKMIQQKHADLSKNSKAQANMAMRVFRA 192 Query: 234 FIKWS--NY--QKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAV---- 285 +S +Y + +IP + + + +K V + + ++Q+ W A+ Sbjct: 193 VYNFSIEHYLDENDQPILIPYNPVKTLSAKK-VWNKIKRRKTYINEDQIPDWIRAIFDYK 251 Query: 286 -RSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVS 344 R + ++ L+LTG RREE SL WS +D K+ + D GE P T + Sbjct: 252 DRGQSLETNRDFMLTLVLTGFRREECESLPWSSIDLKYGKITSIDPKNGE---PHTLPMG 308 Query: 345 ELLNVLAQSPNSDVNKEGWVFRS-NSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFG 403 + L L + D+ E WVF S S SG I+ ++ L E+ + H LRR+FG Sbjct: 309 DFLWELMKKRRRDIQSE-WVFPSAKSASGHIVNISKVRSKINELCEIK-FTFHDLRRTFG 366 Query: 404 TLAEWVEVPTGIVAQIMGHKPSA 426 ++AE ++ + +++ HK + Sbjct: 367 SIAEGLDYGHYTIKRLLNHKKDS 389 >UniRef50_Q5P855 Phage integrase n=5 Tax=Proteobacteria RepID=Q5P855_AZOSE Length = 432 Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 111/457 (24%), Positives = 177/457 (38%), Gaps = 64/457 (14%) Query: 32 KFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTIGNIN 90 K T + R LPEGK F WD +V R + +G +++ Q G++ R+TIG Sbjct: 3 KLTKTYIDRLALPEGKDGEFHWDTEVKGFGLRVSPTGKVSYLMQGRVHGRSARITIGPHG 62 Query: 91 DWKIDDARAEARRLQTLIDTGIDPR-IAKAVK-IAEAESLQAESRKTKVTFSVAWEDYLQ 148 + +D AR AR + GIDPR +AK K AEAE++ VT + Y+ Sbjct: 63 VFTVDQAREVAREHLRSMRMGIDPREVAKQKKATAEAEAVAG------VTLQEVCDAYVS 116 Query: 149 ---ELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 +L+ + KR +T ++A P+A++ + Sbjct: 117 RPGKLKASTQIEIKRHVATTFVA-------------------WKDKPIAAITEDDCRKRY 157 Query: 206 PDYIAAWLSTERQ-NRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPV 264 + + L +R P + +LRA I ++ Q K P L P Sbjct: 158 REMLTKGLRGDRDGGSPGQANQGFSVLRALINYAARQYKKADGSPLILRN--------PA 209 Query: 265 SASKADDCLQKEQ---------------LKSWFSAVRSLNNPIASAYLQVLLLTGARREE 309 SA K D E+ L+ W + + + + LLLTGAR E Sbjct: 210 SALKDDWVALPERKTRIPESKIGAVWNALQQWRKVAYTRDTESSIDLVTFLLLTGARIGE 269 Query: 310 IASLRWSDVDFKWSSMRIKDKIEGERI-IPLTPYVSELLNVLAQSPNSDVNKEGWVFRSN 368 A+L W V+ + D + +PL+ +ELL + + +VF S Sbjct: 270 AAALEWERVNLDEGWWHLPDPKNRNPVWLPLSTQAAELLKTRRR-----IKDNPFVFTSW 324 Query: 369 SKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLA-EWVEVPTGIVAQIMGHKPSAL 427 + I +PR + +A I+ H LRR+F T V + + H P + Sbjct: 325 GECKHISDPRDTMKKLSAVAGT-KITPHDLRRTFTTFGIAQCSVELHKIELLTNHVPKGV 383 Query: 428 AEKHY-RRRPLDLLRKWHEKIETWILNEAGITIKNNV 463 +HY L L+ ++I WI + I +NV Sbjct: 384 TARHYLETSHLQYLKPEVQRIADWIEEQGRIAKGDNV 420 >UniRef50_C6XR20 Integrase family protein n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XR20_HIRBI Length = 402 Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 110/437 (25%), Positives = 179/437 (40%), Gaps = 60/437 (13%) Query: 32 KFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKA--FVFQSVYA--GKTLRMTIG 87 KFT L+ L +K+ WD+++T R K FV QS + G TL +TIG Sbjct: 4 KFTLSNLK--ALKPSEKRYVCWDSELTGFGARVQPSGKVVFFVRQSRFTETGTTLDITIG 61 Query: 88 NIND-WKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDY 146 + W +AR++A L + GIDPR + ++ +++A Y Sbjct: 62 ALGQPWTPSNARSQATLLLLQLKQGIDPR----------------KKTNEINYTIA--SY 103 Query: 147 LQELRTGISAKTKRPYST--------RYIADHINLSSRGGESKKRGQGPTSAGPLASLLN 198 E+ G + K+P + R+I+ H+ G+ K + T S + Sbjct: 104 F-EVFCGQTNGRKKPRTIKLEESLFKRHISPHL------GKVKLKELNTTHISNFMSKVA 156 Query: 199 LPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNV 258 P + + +PT A+ +L A + N+ K G++ + A+ NV Sbjct: 157 NPDKIIVEKTKPRGKAVVSGGKPTAN-RAHDILSAML---NHAVK-AGLLDKNPAK--NV 209 Query: 259 RKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAY----LQVLLLTGARREEIASLR 314 K K + L + +++ +R + + Y L+VL+ TGAR+ EI SLR Sbjct: 210 AKF---RTEKKERFLTEVEIQRLGQELRQAGSDGTNTYAIEALKVLMFTGARKSEILSLR 266 Query: 315 WSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKI 374 W +D++ S + D + I L V +LN L PN N GWVF SN + Sbjct: 267 WEYIDWQRSLANLPDSKNDMKSIVLPSVVISILNNL---PNKGTN--GWVFPSNDGNTHF 321 Query: 375 IEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRR 434 + NR A L + +H LR +F ++ I+ + + H A ++ Y Sbjct: 322 TGLQKIWNRIRTNANLRDVRIHDLRHTFASVGAAEGKSLYILGKALTHANPATTQR-YAH 380 Query: 435 RPLDLLRKWHEKIETWI 451 D LR E I I Sbjct: 381 LADDPLRHAVEAISNKI 397 >UniRef50_Q7WFY2 Phage-related integrase n=1 Tax=Bordetella bronchiseptica RepID=Q7WFY2_BORBR Length = 424 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 106/443 (23%), Positives = 169/443 (38%), Gaps = 73/443 (16%) Query: 49 QTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEA-RRLQT 106 Q F W + A R T SGAK+++ Q KT R TIG D+AR A RL Sbjct: 22 QAFHWCSVTPGFAVRVTASGAKSYIVQGRVNSKTCRYTIGPCELLGTDEARKRALARLLE 81 Query: 107 LIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRT--GISAKTKRPYST 164 + D G++P++ + + A+ VT EDY++ RT G + + Sbjct: 82 MHD-GMNPQVERKRRQAQG-----------VTLREVMEDYVENKRTKHGTLRDSSQADIK 129 Query: 165 RYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVT 224 R + H LA + P++ +T + PT Sbjct: 130 RCVTQH----------------------LADWADKPVASITREACVKRFRELSATAPTTA 167 Query: 225 AHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWF-- 282 +R LRA W+ + + P Y + + PV + KE + F Sbjct: 168 NQVFRNLRALCNWA----RETNVAPDG---SYPILPINPVVQAFKSVTWNKEVTREEFVP 220 Query: 283 ----------------SAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDV---DFKWS 323 + + + + A+ + L+LTGAR E ++L W DV D S Sbjct: 221 LAKVGAVWNMLAERSNAQIYTTADVTAAHLVMFLILTGARIGEGSALHWKDVRLDDEVPS 280 Query: 324 SMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVF--RSNSKSGKIIEPRSAH 381 + K E IPL+ + LL + D E +VF R+ ++ + + R Sbjct: 281 FTFTQTKNHNEVTIPLSTQLHALLAARYSARRPD---EEYVFPSRTGTREPHMQDARGTM 337 Query: 382 NRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHY-RRRPLDLL 440 R +A L H+ H LRR+F +A V + H P + KHY + R L L Sbjct: 338 QRVSKIAGL-HLHNHDLRRTFLAIAIECGVEMWKAEILTNHLPQTVTLKHYTQTRDLRYL 396 Query: 441 RKWHEKIETWILNEAGITIKNNV 463 + +++ WI +A + NV Sbjct: 397 QADTQRVADWITKQAQVASGQNV 419 >UniRef50_C6I0A6 Phage integrase family protein n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6I0A6_9BACT Length = 453 Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 53/170 (31%), Positives = 78/170 (45%), Gaps = 6/170 (3%) Query: 292 IASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLA 351 I AY +L TG RR E A+L DVD + + KD +R IPL+ + ELL L Sbjct: 271 IVPAYFIFVLFTGCRRNEAATLTRHDVDLENGFVTFKDTKTVDRTIPLSEPLIELLLRLK 330 Query: 352 QSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEV 411 WVF K+G + EP+ + + +H LRR+F T A+ V Sbjct: 331 TETGGP-----WVFPGRGKTGHLTEPKKTLASVIKTHNMKPFCIHDLRRTFITYAKGV-A 384 Query: 412 PTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWILNEAGITIKN 461 P V ++GHK ++ KHY + LR+ E I +L + +K+ Sbjct: 385 PAMAVDNLVGHKTQTVSAKHYEFPTPESLREPMETITAKLLELSMNVVKS 434 >UniRef50_B3E293 Integrase family protein n=1 Tax=Geobacter lovleyi SZ RepID=B3E293_GEOLS Length = 409 Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 90/388 (23%), Positives = 160/388 (41%), Gaps = 60/388 (15%) Query: 49 QTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLR--MTIGNINDWKIDDARAEARRLQT 106 Q +D ++ RAT A F ++ G + + + IG + + ARA+A Sbjct: 21 QVDYFDTELAGFGVRATKEALTFFVRARQRGTSKKPFIHIGAFGLYTCEQARAQATGYLQ 80 Query: 107 LIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVA--WEDYLQELRTGISAKTKRPYST 164 + GI+P + K+ VT +VA Y+ +T ++ T R Y+ Sbjct: 81 KLKEGINPHPDRQPKL--------------VTITVADLHRQYMSTKKT-LAPATIRQYAA 125 Query: 165 RYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLS-TERQNRPTV 223 ++ +H L LP +T + L E N + Sbjct: 126 -WMENHFK----------------------DWLTLPADTITGSMVLERLELMEITNGKSQ 162 Query: 224 TAHAYRLLRAFIKWSNYQKKYQGII---PGDLAQDYNVRKMVPVSASKADDCLQKEQLKS 280 +A +LLR+ ++ + G+I P D ++ VR+ + ++ E L Sbjct: 163 AINAVKLLRSLFRFG--LALHPGVIHRNPVDGVRE--VRERDWAKKKRRITFIKPEDLPI 218 Query: 281 WFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIK------DKIEGE 334 WF AV + +NP Y+ +LL TG RR E A L+WSD+DFK + +K E + Sbjct: 219 WFKAVNAYDNPKGRDYMLLLLYTGLRRNEAARLKWSDIDFKRKAFTFTPEKKRGEKPEDD 278 Query: 335 RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHIS 394 ++ P +L +L + + E ++F + + P + + R ++ A Sbjct: 279 QVT--MPMSEQLYKLLLKRRAAGYENE-YIFPGKHPAPFLSNPDN-YKRDIIAASGVQFC 334 Query: 395 LHGLRRSFGTLAEWVEVPTGIVAQIMGH 422 H LRR+F T+AE ++VP + ++ H Sbjct: 335 FHDLRRTFITIAEGLDVPHYSLKALLNH 362 >UniRef50_B5K270 Integrase n=1 Tax=Octadecabacter antarcticus 238 RepID=B5K270_9RHOB Length = 389 Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 13/176 (7%) Query: 270 DDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI-K 328 D LQ E+L +F A+ + N +A + + LL GAR+ ++RW ++ F + RI + Sbjct: 202 DRFLQPEELPRFFEALSNEPNEVARDFFMISLLAGARKSNTLAMRWDEISFHGETWRIAR 261 Query: 329 DKIEGERIIPLTPYVSELL---NVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRAL 385 K + +I+ L+P E+L + + SP WVF + SG + +P+ A R L Sbjct: 262 TKNDDPQIVHLSPQAMEILKERKLHSLSP--------WVFPGDGASGHLADPKKAWMRIL 313 Query: 386 VLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLR 441 A + + +H LRR+ G+ + I+ + +GH+ S + Y R LD +R Sbjct: 314 KEAGIADLRIHDLRRTLGSWQAATGANSYIIGKSLGHR-SQQSTAVYARLNLDPVR 368 >UniRef50_A1AUY6 Phage integrase family protein n=2 Tax=Desulfuromonadales RepID=A1AUY6_PELPD Length = 402 Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 87/393 (22%), Positives = 157/393 (39%), Gaps = 66/393 (16%) Query: 54 DADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGI 112 D + L R + +G + F + Y G+ + +++G + DAR+ + L+ Sbjct: 38 DIECIGLHLRVSKNGRRFFQHRYRYLGRKMCLSLGEFPAVSVQDARSRVAEHKALLARDK 97 Query: 113 DPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHIN 172 DP + + KV + +E+ +ST++ H Sbjct: 98 DP----------------AAERGKVRADLTFEE----------------FSTQHYLPHAK 125 Query: 173 LSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAY---- 228 + + K Q P+ L L L +TP +A S E++ TA+ Sbjct: 126 AHKQTWDDDK-NQIERRLNPI--LGKLRLQAITPRDVAMVHSKEKERTTACTANHLLATL 182 Query: 229 -RLLRAFIKWSNYQKKYQG----IIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFS 283 R+L +KW +K G G L + Y L KE+L + Sbjct: 183 KRMLNLAVKWGLLEKNPAGGQEKFKEGPLRERY----------------LSKEELPKFLK 226 Query: 284 AVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGE-RIIPLTPY 342 A+ ++ ++ A L++LL TG RREEI SLRW +V + + G R + L Sbjct: 227 ALEDQDDLLSVAALRMLLYTGCRREEIMSLRWENVRLDEERIFLPKTKNGRSRTVHLNAR 286 Query: 343 VSELLNVLAQSPNSDVNKEG--WVF--RSNSKSGKIIEPRSAHNRALVLAELPHISLHGL 398 E++ L + + G +VF R +K G I + R +A + A + + +H L Sbjct: 287 AKEVIQDLQARKDQEDRTRGSEYVFPSRQGTKKGYIYDLRKPFEKACLNAGIDNFRIHDL 346 Query: 399 RRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKH 431 R +F ++A V +++GH+ A+ +++ Sbjct: 347 RHTFASMAVSSGADLYAVQRLLGHQDIAMTQRY 379 >UniRef50_B3T0I4 Putative Phage integrase family protein n=2 Tax=root RepID=B3T0I4_9ZZZZ Length = 422 Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 99/436 (22%), Positives = 177/436 (40%), Gaps = 53/436 (12%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMT 85 +A + R+ + T+ K + +WD +V+ CR +K ++ ++ G+ T Sbjct: 3 LATRHEGNVMARITKRTVDSLKPGSIVWDGEVSGFGCRCQVKSKVYMLKTAIGGRQRWFT 62 Query: 86 IG-NINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWE 144 IG + + W ++ AR A+R+ I G DP + ++ K K T + E Sbjct: 63 IGRHGSPWTVEKARTRAKRIIGNIADGKDP------------AKDRDADKNKPTVAELCE 110 Query: 145 DYLQELRTGISAKTKRPYS----TRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLP 200 YL++ + + K+P S + I +H+ L G E +AS+ Sbjct: 111 RYLEDY----AKEHKKPSSLKSDQKNIENHV-LPLLGREF------------VASVTFAD 153 Query: 201 LSELTPDYIAAWLSTER----QNRPTVTAH---AYRLLRAFIKWSNYQKKYQGIIPGDLA 253 + S ER Q P VT A R L K N +++ G Sbjct: 154 IDRFKRAVKDGKSSRERKPEHQGGPNVTGGKGVANRCLALLSKMFNLAERWGWCSVGS-- 211 Query: 254 QDYNVRKMVPVSASKADDCLQKEQLKSWFSAVR--SLNNPIASAYLQVLLLTGARREEIA 311 R + +K + L ++L + + NP A A +++L+ TGAR EI Sbjct: 212 --NPCRHVDRYPENKREKFLSDKELAALAEVLNKSESENPYAVAAIRMLIFTGARLGEIL 269 Query: 312 SLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKS 371 L W+ VD + + + + D G++ + L+ + L+VLA P+ N V Sbjct: 270 HLEWAHVDMERAMLLLPDPKTGQKAVFLS---APALDVLANLPHMKNNPH--VICGEKDG 324 Query: 372 GKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKH 431 ++ + R A L + LH LR SF ++A + ++ +++GH +A + Sbjct: 325 SHLVNLQKPWGRIRKRAGLEDVRLHDLRHSFASVAASGGLSLPMIGKLLGHTQAATTAR- 383 Query: 432 YRRRPLDLLRKWHEKI 447 Y D L+ +E I Sbjct: 384 YAHLAADPLKAANEAI 399 >UniRef50_C0VG59 Putative uncharacterized protein n=1 Tax=Acinetobacter sp. ATCC 27244 RepID=C0VG59_9GAMM Length = 134 Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 38/102 (37%), Positives = 52/102 (50%), Gaps = 2/102 (1%) Query: 189 SAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGII 248 ++ P+ L LSELT D WL RPT +A AYRL RAF+ W + Y+ ++ Sbjct: 29 TSQPIFQLFEYKLSELTEDVFCDWLD-HNDFRPTTSAKAYRLTRAFLNWCEEHEDYENLV 87 Query: 249 PGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNN 290 P V+ VP +K +DCL K+ LK WF V L + Sbjct: 88 PPKSYNSKKVKDKVPSPKAK-NDCLMKQHLKPWFEEVNKLTS 128 >UniRef50_A5G0X2 Phage integrase family protein n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5G0X2_ACICJ Length = 410 Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 107/437 (24%), Positives = 172/437 (39%), Gaps = 51/437 (11%) Query: 32 KFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIGNIND 91 K +RL + ++ L D L RA G+K++ F+ AG+ M++G + D Sbjct: 3 KTVSKRLNALAITNANREGNLHDGGGLYLRVRA-DGSKSWAFRYTMAGRKHWMSLGPLRD 61 Query: 92 WKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELR 151 + +AR +AR+L+ L+ G DP + E + L AE +T TF Y++ R Sbjct: 62 VSLSEAREQARQLRNLVRDGFDPLAQRR----ERQHLAAE--QTARTFDAVAAAYVEAHR 115 Query: 152 TGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNL-----PLSELTP 206 S +A + S G+ P S SLL++ P+ P Sbjct: 116 AEWSNPKHAQQWENTLATYA--------SPIIGKRPVSE---ISLLDVRRVLDPIWAEKP 164 Query: 207 DYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSA 266 + + T H +R +W PG L Q Y + V A Sbjct: 165 ETASRLRGRVEAVLAYATVHGWRSGDNPARW-----------PGFLDQIYAPK--AKVRA 211 Query: 267 SKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFK---WS 323 K L + ++ + +R +++ L+ +LT R E RW ++DF W Sbjct: 212 VKHHAALDYHDMPAFMAELRE-REAVSARCLEFAILTATRSGEARGARWDEIDFDAAVWV 270 Query: 324 SMRIKDKIEGERIIPLTPYVSELLNVLA-QSPNSDVNKEGWVFRSNSKSGKIIEPRSAHN 382 + K++ E +PL P ELL +A +SP D G +F + + + A Sbjct: 271 IPAPRMKMKKEHRVPLAPRAVELLREMAGRSPRRD----GLIFPGGAPGKPMTDVALAKA 326 Query: 383 RALVLAELPHISLHGLRRSFGT-LAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLR 441 A++ P + HG+R SF AE P I + H E Y+R DLL Sbjct: 327 VAVL---RPGFTAHGMRSSFRDWAAEMTSFPREIAEVALAHINKDRTEAAYQRG--DLLA 381 Query: 442 KWHEKIETWILNEAGIT 458 K + +E W AG+ Sbjct: 382 KRRQLMEAWANYCAGLV 398 >UniRef50_A5FXQ0 Phage integrase family protein n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FXQ0_ACICJ Length = 412 Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 81/333 (24%), Positives = 137/333 (41%), Gaps = 44/333 (13%) Query: 32 KFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAGKTLRMTIGNIN 90 +FT R+ T PEG+K +D ++ R TS G+K ++ Q A R+++G Sbjct: 2 RFTMNRIAALTCPEGRKDALFFDEELPGFGVRVTSTGSKTYLAQYRGATGVRRVSLGKHG 61 Query: 91 DWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQEL 150 + DAR AR + + +G DP + K A Q+E+ T AW QE Sbjct: 62 VISLADARNAARAILGQVASGGDPIAERRAKDEAARQAQSEAAFTVEALIAAWVADRQES 121 Query: 151 RTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIA 210 R A ++ +++ + LA LL +P S +T Sbjct: 122 RR---------------ASYLKVAAAALRTH-----------LAHLLTVPASAMTVRQAV 155 Query: 211 AWLSTERQNRPTVTAHAYRLL---RAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSAS 267 A L + V + RLL RA W+ +++ LA + P Sbjct: 156 AALDRVKAAAGPVAGN--RLLAYARACFGWACKRQR--------LAMNPFAGLERPAREK 205 Query: 268 KADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDV---DFKWSS 324 D L ++ + + A L+ P A + ++L+LT RR+E+AS+RW+++ WS Sbjct: 206 SRDRVLTDAEIGAIWRAAALLDYP-AGQFTRMLMLTLGRRDEVASMRWTEIAADGLTWSL 264 Query: 325 MRIKDKIEGERIIPLTPYVSELLNVLAQSPNSD 357 + K ++ L+ +L+ L + NSD Sbjct: 265 PADRAKNGKSHVVHLSEPARGILSALPRFENSD 297 >UniRef50_Q6ALK6 Related to integrase n=1 Tax=Desulfotalea psychrophila RepID=Q6ALK6_DESPS Length = 406 Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 88/271 (32%), Positives = 126/271 (46%), Gaps = 34/271 (12%) Query: 201 LSELTPDYIAAWLST------ERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGII--PGDL 252 LSE+TPD I W + +R N TA A+R AF+ S+ K I P Sbjct: 143 LSEITPDVILTWRNALLKQKKQRGNDCLSTAMAHR---AFVTLSSIFGKAAANIDNPCSK 199 Query: 253 AQDYNVRKMVPVSASKADDCLQKEQLKSWFSAV-RSLNNPIASAYLQVLLLTGARREEIA 311 Q Y +K + L + LK +FS + + + YL + L TGAR+ I Sbjct: 200 VQRYKEKKRT--------EFLGSDHLKQFFSRLDHEATDELLRDYLLLSLYTGARQANIR 251 Query: 312 SLRWSDVDFK---WSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSN 368 S+RWS++D K W K K +IPL S+ + +LA+ + +VF S+ Sbjct: 252 SMRWSEIDLKTQLWIIPADKSKNAEPMVIPL---ASQAITILAK--RKERYGGDFVFISH 306 Query: 369 -SKSGKIIEPRSAHNRALVLAELP-HISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSA 426 SK+G I EPR + L AELP H +RR+ G+ T I+ +GHK S Sbjct: 307 KSKTGHINEPRRLWKKFLADAELPTSYRFHDIRRTLGSWQAISGSSTKIIGASLGHK-SE 365 Query: 427 LAEKHYRRRPLDLLRKWHEK-IETWILNEAG 456 A HY +D +RK E+ IE ++EAG Sbjct: 366 QATAHYAYLTVDPVRKSVERAIEA--MHEAG 394 >UniRef50_D2LJU9 Integrase family protein n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LJU9_RHOVA Length = 393 Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 88/387 (22%), Positives = 160/387 (41%), Gaps = 53/387 (13%) Query: 52 LWDADVTTLACRATS-GAKAFVFQSVYAGKTLRMTIGNIND-WKIDDARAEARRLQTLID 109 LWD V A +A + G+ +FV ++ G+ +TIG W ++ AR EA RL Sbjct: 20 LWDGQVKGFAAKANANGSVSFVLKTRVNGRQRWVTIGKFGSPWTVETARREALRLLGEAA 79 Query: 110 TGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIAD 169 +G D K K R + F + ++ + +T+ Y T I Sbjct: 80 SGNDIGAEKQAK-----------RAKGLLFGHVADQFIAIHFPKLKPRTRESYGT-IIRL 127 Query: 170 HINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYR 229 H+ K G T P++++ +A + + + P HA Sbjct: 128 HL----------KPAFGAT-----------PIADIRKTSVATFHARHAET-PRNANHALS 165 Query: 230 LLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLN 289 +L + W+ + QG+ P + N+RK +K + L ++L +A+ + Sbjct: 166 VLSKIMNWA----EEQGLRPAESNPCRNIRKY---RETKRERYLSPDELARLGAALAAAE 218 Query: 290 N-----PIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVS 344 + P A +++LLLTGAR EI +LRW+ VD + + D G ++IPL Sbjct: 219 DDKTVDPYIIAAIRLLLLTGARLSEILTLRWTYVDTYRRILNLPDSKTGAKVIPLNQAAL 278 Query: 345 ELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGT 404 +LL L + +N +V + ++ + R A L + +H LR SF + Sbjct: 279 DLLGTLPR-----LNSNPFVLVGRVEGQHLVNLQKPWRRIRKEAGLDDVRIHDLRHSFAS 333 Query: 405 LAEWVEVPTGIVAQIMGHKPSALAEKH 431 ++ + ++ +++GH A ++ Sbjct: 334 VSVGLGGSLPVIGRVLGHSQPATTARY 360 >UniRef50_C1SPM2 Site-specific recombinase XerD n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SPM2_9BACT Length = 397 Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 97/418 (23%), Positives = 172/418 (41%), Gaps = 65/418 (15%) Query: 45 EGKKQTFLWDADVTTLACRATS-GAKAFVFQ-SVYAGKTLRMTIGNINDWKIDDARAEAR 102 +G ++WD ++ A R T K++V + G+ MT+ ++ D+AR +AR Sbjct: 20 QGSGYYYIWDTELKGFALRVTGRPTKSYVIRYRNEEGRQKVMTLFRASNITADEARRKAR 79 Query: 103 RLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQEL----RTGISAKT 158 T G D I K + + ++ + FS E YL+ + + KT Sbjct: 80 TKLTEAQGGTD--ILK----------EKQEKRKAMLFSEFAEIYLEHHARPNNSAGTVKT 127 Query: 159 KRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQ 218 Y R I L + N PL +TP+ A + Sbjct: 128 NESYLERLI-------------------------LPAFGNRPLKSITPEDTAKLHHKIGK 162 Query: 219 NRPTVTAHAYRLLR-AFIKWSNYQKKYQGIIPGDLAQDYN----VRKMVPVSASKADDCL 273 + P + LLR F ++ Q P Q Y R + P + +D L Sbjct: 163 STPVQANRVHALLRKMFTLAETWRYIPQNTNPCVHTQKYKETPVQRFLTPDETKRLEDVL 222 Query: 274 QKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEG 333 +K + K ++SAV +L ++L+ TG R+EEI +L+W ++ + + + I G Sbjct: 223 EKYEEK-YYSAVLAL---------RLLMYTGCRKEEILTLKWENIKNELNLLHIPKSKTG 272 Query: 334 ERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHI 393 E+ +P++ E+L++L + VN+ +V ++ ++I + R A L + Sbjct: 273 EKNVPVS---HEVLDMLENA--YKVNE--YVCFGKFENSRLIGLQKIWERLRKEAGLEDV 325 Query: 394 SLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWI 451 +H LR SF + A + +++++GHK E +Y D L + KI T I Sbjct: 326 RIHDLRHSFASTAISGGINIEFISKLLGHKRITTTEYYYAHVQNDPLHEAANKIATSI 383 >UniRef50_A5CCP8 Phage-related integrase n=25 Tax=Orientia tsutsugamushi RepID=A5CCP8_ORITB Length = 414 Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 83/384 (21%), Positives = 153/384 (39%), Gaps = 48/384 (12%) Query: 32 KFTFERLRRFTLPEGKKQTFLWDADVTTL----ACRATSGA--KAFVFQSVYAGKTLRMT 85 KF LR+ +P+G+K + D D+ L +C G K ++ + Y ++L++ Sbjct: 9 KFINRALRKIKIPKGEKLLIIHDPDIIGLKLKISCTVCGGIVRKTWILEQKYKNQSLKIR 68 Query: 86 IGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTK---VTFSVA 142 I I +AR AR L+TL+ GIDPR K + E + + R+ K +TF Sbjct: 69 IVEFPYLSIKEARKIARELKTLMANGIDPRAVKHQQQIEENENRIKERERKANDITFKEL 128 Query: 143 WEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLS 202 Y++E + K AD ++ ++ KK + + +S Sbjct: 129 CYKYIEEYAKIYTINWKEN------ADRVHTYAQALYEKK-------------ISKIRMS 169 Query: 203 ELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMV 262 ++ P + + + A + IKW G+I + K+ Sbjct: 170 DIEPIFNDISKEGKYATANALLATLRTIFNKAIKW--------GLIENNPTLGIEQHKL- 220 Query: 263 PVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKW 322 + L +++ + + +P+ + + L TGAR+ + + W ++DF+ Sbjct: 221 ----QARERRLSYDEMGRFLQVLCGEASPLIRDFALLALYTGARKSNVLEMEWDNIDFER 276 Query: 323 SSMRIKDKIEGE-RIIPLTPYVSELLNVLAQSPNSDVNKEGWVF-RSNSKSGKIIEPRSA 380 I G+ + IPLT E+L ++ WV S S+SG + P +A Sbjct: 277 KIWHIPKTKNGKAQNIPLTDEAMEILQA-----RKLISTSKWVLPSSTSESGHLSHPNTA 331 Query: 381 HNRALVLAELPHISLHGLRRSFGT 404 A + + +H LRR+F + Sbjct: 332 WKIICEKASIKNFRIHDLRRTFAS 355 >UniRef50_B8KHE9 Site-specific recombinase, phage integrase family n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KHE9_9GAMM Length = 427 Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 71/278 (25%), Positives = 128/278 (46%), Gaps = 22/278 (7%) Query: 193 LASLLNLPLSELTPDYIAAWL------STERQNRPTVTAHAYRLLRAFIKWSNYQKKYQG 246 L ++L+ PL +L P +A + S ++ P+ +L+RA + + Y + Sbjct: 144 LDTILSTPLIKLDPSTLAPIIRRVIAGSEGKRPAPSTADKLIKLIRA-ARTAVYAETLDE 202 Query: 247 IIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGAR 306 D+ + + + + EQL W+SA + +P+ +L+ L+LTG R Sbjct: 203 RFLLDVTTALRRKVAIKPCQPRLHAVIHPEQLPEWWSATEA-EDPLYRDFLRFLVLTGLR 261 Query: 307 REEIASLRWSDVDFKWS-----SMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKE 361 + E A+L W++VD + R K + ER + + +L + + V Sbjct: 262 KMEAAALSWAEVDLNRGLVTIPATRAKSGRDRERALGQATW-----EILLRRRKA-VRGS 315 Query: 362 GWVFRSN-SKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIM 420 WVF ++ + G I++P+ A R + H S H LRR+F + A V + VA ++ Sbjct: 316 CWVFPTSLNGRGHIVDPKKAVARIEKRCSV-HASSHALRRTFVSRAREV-LEREDVAWLV 373 Query: 421 GHKPSALAEKHYRRRPLDLLRKWHEKIETWILNEAGIT 458 GH + + E+HY R + RK+ + E+ +L AG T Sbjct: 374 GHAVAGVTEEHYHARSPEANRKYAQAAESAVLEAAGQT 411 >UniRef50_A3WST9 Probable integrase protein n=2 Tax=Bradyrhizobiaceae RepID=A3WST9_9BRAD Length = 422 Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 97/414 (23%), Positives = 174/414 (42%), Gaps = 81/414 (19%) Query: 51 FLWDADVTTLACRAT-SGAKAFVFQSVYA-GKTLRMTIGNINDWKIDDARAEARRLQTLI 108 F+WD ++ R SGAK+F+ Q A G++ R+T+G +++AR A+ + Sbjct: 20 FVWDDELPGFGLRVKKSGAKSFLVQYRNANGRSRRLTVGRYGVLTVEEARRAAKISLADV 79 Query: 109 DTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIA 168 G+DP AE + L + +T +YL + G+ Sbjct: 80 LKGVDP--------AENKKLD----RGAITIETLCREYLDKAERGL-------------- 113 Query: 169 DHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI-----------------AA 211 + +R GE+K+R T G + + L + T + AA Sbjct: 114 ----ILTRRGEAKRRSTIYTDKGRVERHIVPILGKRTVKDVTTADIRRFQQSVISGKTAA 169 Query: 212 WLSTERQNRPTVT------AHAYRLLRAFIKWS---NYQ--KKYQGII-PGDLAQDYNVR 259 + T+++ R VT A LL + ++ Y+ +GII P D +++ + Sbjct: 170 DIKTKKRGRAIVTGGKGTAARTMGLLGGILSYAVNEGYRPDNPARGIIRPKDETREWRL- 228 Query: 260 KMVPVSASKADDCLQKEQLKSWFSAVRSLNN--PIASAYLQVLLLTGARREEIASLRWSD 317 DD + K +A + N PI ++V+ LTG RR EI L ++ Sbjct: 229 ----------DDAGYRALGKKLTAAEANAVNWQPIL--IMRVIALTGCRRGEIERLLKTE 276 Query: 318 VDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEP 377 +DF S++R+ D G+ I P+ S + VL Q+ +K + +N K + P Sbjct: 277 IDFARSALRLGDSKTGKSIRPIG---SAAIAVLKQACEKSKSKYVFSALTNEKKRYVGLP 333 Query: 378 RSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKH 431 ++ + +V +P ++ HGLR SF + AE + + ++GH ++ E + Sbjct: 334 KALAS--IVGDAVPGLTPHGLRHSFSSTAEDLGFSLPTIKALLGHAGGSVTEGY 385 >UniRef50_Q3SUE5 Phage integrase n=6 Tax=Alphaproteobacteria RepID=Q3SUE5_NITWN Length = 400 Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 87/387 (22%), Positives = 156/387 (40%), Gaps = 55/387 (14%) Query: 47 KKQTFLWDADVTTLACRATSGA-KAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQ 105 +K ++D +V R TSG +AF+ + R+TIG DW + AR EA+RL+ Sbjct: 17 QKNIIVYDEEVVGFGVRITSGGTRAFILTYRIEARERRLTIGAWPDWSVTAAREEAKRLK 76 Query: 106 TLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTR 165 ID G DP +AE + E+R++ + + YL+E + ++ + + Sbjct: 77 REIDQGRDP-------MAERD----EARESPNVRQLI-DRYLEEHASKLAKRNR------ 118 Query: 166 YIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPD-------YIAAWLSTERQ 218 D ++ + E GP A +E+ PD IA +R Sbjct: 119 --DDQASMLRKLVEP---AWGPRKA-----------AEIQPDDVDRLLCQIAGGTLGKRG 162 Query: 219 NRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQL 278 +PT A R+ K N +++ + D + + D L +++ Sbjct: 163 RKPT-PVRANRVGEILRKMFNLAIRWR------IRTDNPAAGFARNAEAPRDRYLSTDEI 215 Query: 279 KSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFK---WSSMRIKDKIEGER 335 +A+ + N A+ ++++LLTGARR E+ RW D W K Sbjct: 216 GRLSAALDAHPNRRAADAVRLILLTGARRGEVLGARWDQFDLDAAVWIKPAATTKQRRLH 275 Query: 336 IIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISL 395 P++ + LL + D WVF +++ + + + AELP + Sbjct: 276 RAPISASAAALLRTIRLRVPKDCE---WVFPGDAEGKPLQDIKRFWEDVRTKAELPAVRT 332 Query: 396 HGLRRSFGTLAEWVEVPTGIVAQIMGH 422 H LR +F +L + ++ +++GH Sbjct: 333 HDLRHTFASLLVSGGMTLPMIGKLLGH 359 >UniRef50_B1JLZ5 Integrase family protein n=3 Tax=Gammaproteobacteria RepID=B1JLZ5_YERPY Length = 476 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 109/450 (24%), Positives = 181/450 (40%), Gaps = 81/450 (18%) Query: 54 DADVTTLACR-ATSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGI 112 D V L R SG K+F GK +R T+G D I++ARA+A L+ L + Sbjct: 27 DTTVNGLILRIGASGVKSFCISRKRNGKFIRETLGRFPDLSIENARAKA--LELLGEVAT 84 Query: 113 DPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYL----QELRTGISAKTKRPYSTRYIA 168 + + V+ A S KVT A + Y+ L+ ++AK R + Sbjct: 85 NGKNPNDVRRVHAMS--------KVTLEDAIQTYIDNRGHRLKP-VTAKQYRSILGNFSG 135 Query: 169 DHI-----NLSSRGGESKKRG--QGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRP 221 D + N+S E++ + QG G SLL + + W Sbjct: 136 DWMNQPMANISRERVEARHKAVTQGSVWFGKDKSLLRAGVGSGSRAQADLW--------- 186 Query: 222 TVTAHAYRLLRAFIKWS-NYQKKYQG--IIPGDLAQDYNVRKMVPVSASKADDCLQKEQL 278 R LRA ++S ++ + +G ++P + ++ + K + ++ L Sbjct: 187 ------ARALRAVYRFSHDHYRDEEGKTLLPDPPTMVLSTKRQWHGTVRKTER-IRTYDL 239 Query: 279 KSWFSAVRSLNNPIASA----------YLQVLLLTGARREEIASLRWSDVDFKWSSMRIK 328 W SAV + N A +++ L TG RR E+ +L W V+ I Sbjct: 240 GRWLSAVDQVRNISADERDDVALSVCDAIEMALFTGLRRSEVFNLTWDRVNIGGRFFWID 299 Query: 329 DKIEGERIIPLT-PYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVL 387 G+ PL P LLN+ + + ++ +VF + G I EPR ++ Sbjct: 300 TTKNGD---PLELPITDTLLNLFRRRLKLKLGEQHYVF--PGQKGIITEPRR------II 348 Query: 388 AELPHISL---------------HGLRRSFGTLAEWVEVPTGIVAQIMGHKP--SALAEK 430 A + +++ H RR+FGT+AE V V + I+ ++M H+ SA + Sbjct: 349 ARITEVTIPSPNPDGLLPIPFKWHDARRTFGTVAELVGVGSYILKRLMNHRTLRSADVTQ 408 Query: 431 HYRRRPLDLLRKWHEKIETWILNEAGITIK 460 Y D L++ K+E IL AG+ K Sbjct: 409 GYLHFGADELQEPARKVERAILEHAGLVEK 438 >UniRef50_A3VQY7 Phage integrase n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VQY7_9PROT Length = 421 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 17/173 (9%) Query: 252 LAQDYNVRKMVPVS-ASKADDCLQK-EQLKSWFSAVRSLNNPIASAYLQVLLLTGARREE 309 LA D + + V+ A + CL + EQ+ + + +++LL+TGAR +E Sbjct: 228 LAPDGKKERYLSVAEAHRLGKCLDEWEQMDRRMTGI---------TIIRLLLMTGARTKE 278 Query: 310 IASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNS 369 I L+WS++DF S R ++ G I P++P V ++L L + + WVF +N+ Sbjct: 279 IEELKWSEIDFDRSFFRFEETKSGRSIRPISPQVLDILKGLPRLHPT------WVFLNNA 332 Query: 370 KSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGH 422 +G ++ A LP + H LR SF + A + ++ ++GH Sbjct: 333 GTGPYCGTQAVWRLVREEAGLPDVRKHDLRHSFASFALANGLSLPVIGTLLGH 385 >UniRef50_B5EC35 Integrase family protein n=1 Tax=Geobacter bemidjiensis Bem RepID=B5EC35_GEOBB Length = 486 Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 62/242 (25%), Positives = 99/242 (40%), Gaps = 38/242 (15%) Query: 218 QNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQ 277 Q R R+LRA + ++ + GI+ + + + RK + + ++ Sbjct: 199 QRREASADGTMRVLRAVLNYTFGDDEELGIVRPNPVRTLS-RKKAWYKVPRRRNLIKNSD 257 Query: 278 LKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGE-RI 336 L +W AV +L N +A YL LL TG RR E A L+W VDF+ I D E Sbjct: 258 LPAWSKAVLALENAVARDYLLFLLHTGLRRNEAACLQWQHVDFEDGCFTIIDTKNKEPHT 317 Query: 337 IPLTPYVSELLN------------------VLAQSPNSDVNKE----------------- 361 +PL+ Y+ LL SP K+ Sbjct: 318 LPLSDYLHTLLEGRKEGLKTELEAAKAALEASLHSPEYLTPKQRQAFRNRVAAAESRLQS 377 Query: 362 GWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMG 421 +VF + ++G I +P+ A A+ A S H LRR+F T+AE +++ + ++ Sbjct: 378 PYVFPGSGRAGYIADPQKALE-AVTQATGIIFSCHDLRRTFATIAESLDLSKYTIKALLN 436 Query: 422 HK 423 HK Sbjct: 437 HK 438 >UniRef50_Q1K3L6 Phage integrase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3L6_DESAC Length = 397 Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 86/363 (23%), Positives = 152/363 (41%), Gaps = 53/363 (14%) Query: 66 SGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEA 125 +G++++ F+ + GK L +TIG + + +A + R + LI GIDPR Sbjct: 46 NGSRSWRFKQKFRGKRLFITIGPYPLFSLQEAIDKTRHFKRLIADGIDPR---------- 95 Query: 126 ESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQ 185 + Q +S+ T F +D+L PY+ ++ + ++ KR Sbjct: 96 QEQQPQSQLTLAQF--VEQDFL-------------PYARKH---YKTFHNQQNMLDKRII 137 Query: 186 GPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQ 245 A PLA + + L + S NR LL + K + Sbjct: 138 KTFGATPLADISKREVM-LFHQQVCDETSGTTGNR------HLSLLSSIFKLA------- 183 Query: 246 GIIPGDLAQDYNVRKMVPVSASKADD-CLQKEQLKSWFSAVRS-LNNPIASAYLQVLLLT 303 + DL + R + +++ D LQ+++ + +++ L+ P A A +L+ Sbjct: 184 --LEYDLLEKNPCRGIKKAKENRSRDRFLQEDEYTRFIQVLQTKLDQPSACAIF-LLIAL 240 Query: 304 GARREEIASLRWSDVDFKWSSMRIKDKIEGE-RIIPLTPYVSELLNVLAQSPNSDVNKEG 362 G R+ E+ SLRW DV + ++D GE R + L LL + Q + Sbjct: 241 GMRKSELLSLRWEDVSLADRHLHLRDTKNGESRYVALNSVSHGLLTKMKQKRKAS---NP 297 Query: 363 WVF--RSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIM 420 WVF R++S+SG + + R +++ + +H LRRS + V IV +I+ Sbjct: 298 WVFPSRTSSESGHLQDVRRTFATVCRESKITGLRIHDLRRSHASHLLNAGVDISIVGKIL 357 Query: 421 GHK 423 GHK Sbjct: 358 GHK 360 >UniRef50_Q0TL05 Phage integrase n=6 Tax=Escherichia coli RepID=Q0TL05_ECOL5 Length = 439 Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 97/391 (24%), Positives = 160/391 (40%), Gaps = 69/391 (17%) Query: 62 CRATSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVK 121 R S K+++++ A K ++T+G+ + AR L+ GIDPR + + Sbjct: 39 VRYGSDNKSWIYRYRIAQKPAKLTLGSYPAMGLAQARKAHADAIELVRKGIDPRHIRKNE 98 Query: 122 IAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESK 181 + E + + +S W+D++ E R KT +P STR +AD+ R E Sbjct: 99 KQKNEQM--------IIYSELWKDWI-EFR-----KTSKPISTRTLADYEGTYHRHLEK- 143 Query: 182 KRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQ 241 +L NL + ELT I LS R+ +L + +N Q Sbjct: 144 -------------ALGNLRIDELTKSVIFEHLSNVRKTSSEAVRKGLIILNMTLDHANLQ 190 Query: 242 KKYQGIIPGDLAQDYNVRKMVPVSASKADD-CLQKEQLKSWFSAVRSL---NNPIASA-- 295 G++ + A+ M S +K + L + +L+ + A+ IAS Sbjct: 191 ----GMLEHNPARLLKP-AMFGASMNKPRERWLPENELRMLWKALDDATVGGGSIASGGY 245 Query: 296 --------------YLQVLLLTGARREEIASLRWSDVDF-KWSSMRIKDKIEGERIIPLT 340 L++++ TG RR E A +RW ++ +W+ K+ I+ L Sbjct: 246 GISSSVVLSHSVANALRLIIFTGVRRSEAAQMRWDQINGERWTIPATKNG--KSHIVTLH 303 Query: 341 PYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRAL------VLAELPHIS 394 PY+ L+ + + +VF S SK I A RAL LAEL S Sbjct: 304 PYMLSLIKT-----QREFTEGAYVFGSTSKPDFPI-TNDALTRALERVRSKYLAELTPFS 357 Query: 395 LHGLRRSFGT-LAEWVEVPTGIVAQIMGHKP 424 H LRRS T AE+++ P ++ ++ H P Sbjct: 358 PHDLRRSVATGCAEYLDAPERLIELLLNHVP 388 >UniRef50_A8TPU7 Phage integrase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TPU7_9PROT Length = 410 Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 100/424 (23%), Positives = 163/424 (38%), Gaps = 77/424 (18%) Query: 45 EGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARR 103 +G+ FLW + R SG K +V Q + R+ IG +D AR A+ Sbjct: 8 DGEGDIFLWCTALPGFGLRVYPSGRKVYVCQVRVGRRQRRLKIGLAETLTLDQARERAKL 67 Query: 104 LQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTG-ISAKTKRPY 162 G DP+ L+ + R+ +T + Y++ G + + RP Sbjct: 68 AIDAASEGRDPQ------------LERQERRAALTVAELCTVYMETAEAGQVRTRFGRPK 115 Query: 163 STRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT-------PDYIAAW--- 212 + +A RG+ PL + N+P LT D IA+ Sbjct: 116 AASTLA------------IDRGRIDRHLVPL--IGNVPAHALTRAAVQRLADDIASGKTA 161 Query: 213 --LSTERQNRPTVTAHA------YRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPV 264 + T+ + VT A LL W+ + + P A + K Sbjct: 162 GRVKTKSRGVAHVTGGAGTAARVIDLLGGIYSWAAKRDLVPTVNP---AHGVDTAK---- 214 Query: 265 SASKADDCLQKEQLKSWFSAVRSLN--NPIASAYLQVLLLTGARREEIASLRWSDVDFKW 322 A D L +++++ A+ + P+A+ L+++ LTG RREE LRW++VD Sbjct: 215 -AGTKDRVLTVDEMQALGKAIEAAQEKQPMAAGALRLIALTGLRREEACGLRWAEVDLDA 273 Query: 323 SSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHN 382 +S+R+ G + PL +LL L P D +VF S+ +PR+ + Sbjct: 274 ASLRLSSTKTGRSLRPLGSPAVDLLRHL---PQLDA---AFVFPSSRSR----DPRTGQS 323 Query: 383 -RALVL----------AELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKH 431 RA L A L H RR+F ++A G + +++GH + H Sbjct: 324 ARAADLKKQLAAIFDAAGLADARSHDCRRTFASVAADEGFGDGTIGELLGHARRGVTAVH 383 Query: 432 YRRR 435 Y RR Sbjct: 384 YVRR 387 >UniRef50_A4VJM8 Integrase n=2 Tax=Gammaproteobacteria RepID=A4VJM8_PSEU5 Length = 467 Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 79/356 (22%), Positives = 147/356 (41%), Gaps = 59/356 (16%) Query: 33 FTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAF-VFQSVYAGKTLRMTIGNIN 90 F+ ERL PE K+ D + L R + SG K F +++ + G+ R+T+G Sbjct: 9 FSKERLLALPPPEAGKRATYHDTKIQGLQLRVSPSGVKTFSLYRRMKGGQPERVTLGRFP 68 Query: 91 DWKIDDARAEARRLQTLIDTGIDPRIAK-AVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 ++ AR A + I+ G +P A+ A+++ + +F ++D+L++ Sbjct: 69 AMTVEQARKHASAVNAEIEAGGNPAAARRAIRVEQ-------------SFGEVFDDFLKK 115 Query: 150 LR----TGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 R T + +TKR YS D + L +++K LS++T Sbjct: 116 KRKRDGTPLGERTKRDYS-----DVLRLYLEPIKARK------------------LSQIT 152 Query: 206 PDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVS 265 I A + + A ++ + ++ + ++G P Q + Sbjct: 153 RADIKAIHAKVTKRSAAQADRALAVVSSVFSYAADMELFEGTSPASRIQKNH-------- 204 Query: 266 ASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSM 325 A D Q +L F A+ S + + LLTGARR + ++ W D+D + Sbjct: 205 APSRDRFAQGVELPYLFEAI---GESSLSDFFLLALLTGARRSNVQAMAWRDLDLEAHVW 261 Query: 326 RIKDKIEGE-RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSA 380 RI G + + L+P +L Q+ ++ +VF + K+G ++EP+ A Sbjct: 262 RIGMTKNGTPQNVTLSPEAVSVLRARKQTSSASA----FVFPGDGKTGHLVEPKKA 313 >UniRef50_B1I2A9 Phage integrase family protein n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I2A9_DESAP Length = 300 Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 60/217 (27%), Positives = 95/217 (43%), Gaps = 16/217 (7%) Query: 212 WLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKM-VPVSASKAD 270 WL ER+ + R+F ++ Q+ IPGD +RK+ P + Sbjct: 63 WLQEERKLKAASLRRKIHCFRSFFRYLAEQE----YIPGD-----PMRKIRPPKEPDRVP 113 Query: 271 DCLQKEQLKSWFSAVRSLNNPIA---SAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI 327 L++E+LK +A L P L +L G RR E+ L W DVD ++R+ Sbjct: 114 IYLKEEELKWLLTAPGHLGGPYHLRDKLILHLLAYCGLRRSELLRLDWDDVDLGAGTLRV 173 Query: 328 KDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVL 387 + K + ER+IPL P + ++L Q+ N+ ++ R + K R R + + Sbjct: 174 RGKGKRERLIPLIPELQQILWEYLQTRLPLENRALFLGREGGRMNKDALTR-LFKRYVRM 232 Query: 388 AELPH--ISLHGLRRSFGTLAEWVEVPTGIVAQIMGH 422 A L I+ H LR SF TL + ++MGH Sbjct: 233 AGLDPAVITPHKLRHSFATLLLEKGTDVFTIQELMGH 269 >UniRef50_D0LNC0 Integrase family protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LNC0_HALO1 Length = 434 Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 69/290 (23%), Positives = 122/290 (42%), Gaps = 53/290 (18%) Query: 201 LSELTPDYIAAWLSTERQ-NRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVR 259 ++E++ D + +L + N PT ++R F W + G + + + R Sbjct: 130 ITEVSRDDLQQYLDEGLETNAPTTMRSYMTVVRCFFNWLEEE--------GWIRFNPSRR 181 Query: 260 KMVPVSASKADDCLQKEQLKSWFSA---VRSLNNPIASAYLQVLLLTGARREEIASLRWS 316 +P + + D L EQ+ A VR P+A A ++L R+ E+ +LR Sbjct: 182 IKLPKAEQRRGDFLMPEQVGPMLDACFRVRPDFAPMAMA----VVLGSFRKGELVNLRRQ 237 Query: 317 DVDF--KWSSM--RIKDKIE-----------GERIIPLTPYVSELLNVLAQSPNSDVNKE 361 DVD +W+ + + D+ E R +PL P + E L + D + Sbjct: 238 DVDLTRRWAFVLENVGDEAEEAAAWSPKTESSRRAVPLHPLLVETLRGVEPVKRPDGSLS 297 Query: 362 GWVFRSNSKSG------------KIIEPRSAHNRA-------LVLAELP---HISLHGLR 399 W+F + + + R A + L LAE +++HGLR Sbjct: 298 PWMFPVSDARKRSRFRNRRGALQRAVGDRRAPDTTFFGRCLKLALAEAGISRPVTMHGLR 357 Query: 400 RSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIET 449 R+FG L + V P ++ Q MGH+P + +HY R ++++W ++IE Sbjct: 358 RTFGVLLQDVGCPDSVIRQAMGHEPIGVTARHYLPRRDAVVQRWVDRIEV 407 >UniRef50_Q89GJ7 Blr6348 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89GJ7_BRAJA Length = 452 Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 105/436 (24%), Positives = 170/436 (38%), Gaps = 75/436 (17%) Query: 41 FTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAE 100 F + +K+TF D+ RA+S +R++IG+ + ARA Sbjct: 35 FVVVGKRKRTFTVQGDLRQRGKRASS---------------IRVSIGDATELTTRAARAI 79 Query: 101 ARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE--LRTGISAKT 158 A+ I G P+ K + E+ S KT T AWE YL+ +R G S KT Sbjct: 80 AKEYLAQISKGQHPKARLDGKPGQTET-DGNSAKTGATLKHAWERYLEAHLIRKGRSEKT 138 Query: 159 KRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTE-- 216 Y DH+ A L+ PL +L D + + Sbjct: 139 ISGYR-----DHVERL------------------FAEWLDTPLLDLATDPASVAEKHDQL 175 Query: 217 -RQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDL---AQDYNVRKMVPVSASKADDC 272 ++N P + + R LRA N+ +K +P D A D+N + D Sbjct: 176 TKENGPYIANGSMRTLRAIY---NHARKTNRSLPRDNPADAVDWNQEERRNTGMGAGD-- 230 Query: 273 LQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIE 332 LK WF + SL+NPI + LL G+R + + ++F+ ++ I Sbjct: 231 -----LKGWFLELASLDNPIRREFHLFTLLCGSRPTALQQAKPEHINFRRRTLHIPKPKG 285 Query: 333 GER---IIPLT-PYVSELLNVLAQSPNSDVNK-EGWVFRSNSKSGKIIEPRSAHNRALVL 387 G + IPL+ V L VL ++ + W+F + S +G + E + +RA+ Sbjct: 286 GSKRAFDIPLSREMVLSLTRVLRFGRQMHPSQAQQWLFPAESATGHLSE--TKEDRAI-- 341 Query: 388 AELPHISLHG--LRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPL--DLLRKW 443 +S G LR++F T+A V +M H + + R L D LR Sbjct: 342 -----LSKWGNDLRQTFRTIATAAGVSEFDAKLLMNHSIPGVNAGYVTRHKLVEDHLRSQ 396 Query: 444 HEKIETWILNEAGITI 459 + I T + + G ++ Sbjct: 397 QQAISTVVFSALGNSL 412 >UniRef50_B8ERI0 Integrase family protein n=1 Tax=Methylocella silvestris BL2 RepID=B8ERI0_METSB Length = 400 Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 85/363 (23%), Positives = 157/363 (43%), Gaps = 48/363 (13%) Query: 66 SGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEA 125 SGAK++ ++ + GK ++TIG+ + AR+ A T + G +P K V Sbjct: 37 SGAKSWAYRFSFEGKPKKLTIGSYPAIDLSRARSIALASATKVANGRNPAAEKKV----- 91 Query: 126 ESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQ 185 + E + + Q + + KT RP S + + + S +R Sbjct: 92 ---EREKARKPSDLDLVDVVVAQFVVKHVEPKT-RPQSAKEMKRILKREILSRWSGRR-- 145 Query: 186 GPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWS-NYQKKY 244 L+E+T I L P + + ++ + I WS + + Sbjct: 146 ---------------LTEITRSDIRDLLEAIADRAPIMANRVFEVISSLINWSISMEMLS 190 Query: 245 QGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTG 304 I G +RK P A + D L +++L + A P S ++VL+L+G Sbjct: 191 ASPIAG-------LRK--PSPAKRRDRILSEKELTDVWQASERAGWPYGS-MIKVLILSG 240 Query: 305 ARREEIASLRWSDVDFK---WSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKE 361 RR E++ + WS++DF+ W+ ++ K IIPL+P + ++L L + ++ Sbjct: 241 QRRSEVSDMTWSEIDFEERSWTLPAVRTKNGKGHIIPLSPTIIDVLLTLPRIG----SES 296 Query: 362 GWVFRSNSKSGKIIEPRSAHNRALVLA--ELPHISLHGLRRSFGTLAEWVEVPTGIVAQI 419 G+VF +N S I + +AL+++ + +LH LRR+F T ++V +V ++ Sbjct: 297 GFVFTTNGFSP--IRNFARRKKALMMSCQSENNWTLHDLRRTFATGMARLKVELPVVEKL 354 Query: 420 MGH 422 + H Sbjct: 355 LNH 357 >UniRef50_Q2GBS0 Phage integrase n=2 Tax=Sphingomonadaceae RepID=Q2GBS0_NOVAD Length = 430 Score = 64.7 bits (156), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 51/191 (26%), Positives = 90/191 (47%), Gaps = 8/191 (4%) Query: 273 LQKEQLKSWFSAVRSLN----NPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIK 328 L ++LK A+ L NP A ++ LTG RR+EIA L+WS+VDF+ + ++ Sbjct: 235 LSMDELKRLGEALDELEKAGVNPKAVNIARLWALTGCRRDEIAGLQWSEVDFETGRLVLQ 294 Query: 329 DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLA 388 D G + PL + LL L + +D +VF + G + +A++ A Sbjct: 295 DTKTGRSVRPLGGAAAILLAKLREGATADAV---FVFPAERGEGFFQGTKRVWAQAILKA 351 Query: 389 ELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIE 448 +LP ++ H LR + G+L +V ++GH +A + Y D R +++ Sbjct: 352 KLPGVTPHILRHTVGSLGASAGEGMLLVGAVLGHS-NARSTLQYMHVASDPARLAADRLT 410 Query: 449 TWILNEAGITI 459 T + + G+ + Sbjct: 411 TPVADALGLPM 421 >UniRef50_Q2NBN1 Site-specific recombinase, phage integrase family protein n=3 Tax=cellular organisms RepID=Q2NBN1_ERYLH Length = 390 Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 92/390 (23%), Positives = 161/390 (41%), Gaps = 60/390 (15%) Query: 40 RFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSV-YAGKTLRMTIGNINDWKIDDAR 98 R LP+ +++ +WD ++ R F F + + GK R+T+G ++ + AR Sbjct: 20 RRKLPQREREYCIWDTELAGFGLRVRPSGNYFWFVRLRHRGKHRRITLGRTDELEAGLAR 79 Query: 99 AEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKT 158 A+ARR+ L +T +D +AV ++ T F A+ D L R + T Sbjct: 80 AQARRI--LAETALDGLPKRAV---------VKATPTMTDFVEAYWDDLS--RVWKPSTT 126 Query: 159 KRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQ 218 KR + A +++ G+++ ++++ P I W Sbjct: 127 KRNWD----AWRLDIKPTFGDTR-------------------VADILPADIHRWRDGCAG 163 Query: 219 NRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQL 278 A +L A +K++ K + PG R M + L + Sbjct: 164 ESEVKFNRAVPVLSALLKYAEALKMRR---PGS----NPCRGMPRYKRQSVERYLTPAEY 216 Query: 279 KSWFSAVRSL--NNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERI 336 + +A+R + P A ++LL TGAR EI +LRW V K + + D G ++ Sbjct: 217 RRIGAALREAEADRPAEVAIARLLLFTGARVGEIKNLRWEWV--KPPRLLLPDSKTGPKV 274 Query: 337 IPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVL---AELPHI 393 I L ++L V+ + +S++ VF +K+GK P + V LP + Sbjct: 275 IWLNSQAQDVLAVIERREDSEL-----VF--PNKTGK--RPVNFDQWWFVFRRRCALPDV 325 Query: 394 SLHGLRRSFGTLAEWVEVPTGIVAQIMGHK 423 +H LR SF + A VP + +++GHK Sbjct: 326 RIHDLRHSFASTAIMENVPLSTIGKLLGHK 355 >UniRef50_B5J4F2 Site-specific recombinase, phage integrase family protein n=19 Tax=Octadecabacter antarcticus RepID=B5J4F2_9RHOB Length = 372 Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 103/415 (24%), Positives = 155/415 (37%), Gaps = 100/415 (24%) Query: 43 LPEGKKQT-FLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEA 101 LP K T WDA++ L +K + FQ G+T R+ IG AR A Sbjct: 22 LPHAKAGTDKYWDAEIKGLVLFVGKRSKTWYFQKDVGGQTKRILIGRFPIISAQAARQTA 81 Query: 102 RRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRP 161 + G KA +I T A E YL A+ K Sbjct: 82 LGFALEMGRGA----GKAAQIGAP------------TLEAAMEGYL--------ARPKLR 117 Query: 162 YSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRP 221 T I LS L + LPL E++ + Q Sbjct: 118 SETNKIGMRAQLSLH----------------LKDWMRLPLDEIS----KGMMVRRHQAMS 157 Query: 222 TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSA----SKADDCLQKEQ 277 + A +LR+F N+ ++ DLA+ P A D E Sbjct: 158 GSPSAANHVLRSFRAIYNHARRT-----CDLAE-------CPTMAIEWFEDKPDGRIIEN 205 Query: 278 LKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERI- 336 L+ W + L NPI + ++LL TG R+ E+ +L+W D+I +RI Sbjct: 206 LRHWRKTIDDLPNPIHRVFYELLLFTGLRKTEVFTLKW-------------DQIHEDRIH 252 Query: 337 IPLT--------PYVSELLNVLAQSPNSDVNKEGWVFRS-NSKSGKIIEP-RSAHNRALV 386 +P+T P + +LA P ++++ WVF S S++G I P R +N Sbjct: 253 LPMTKNGRSFDLPILQLHHEILA--PLRPLSRD-WVFPSPKSETGHITRPERLKYN---- 305 Query: 387 LAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLR 441 PH+ RR+F T+A V IV +++ H P ++ + Y + LD LR Sbjct: 306 ----PHMH----RRTFATVAMEAGVLEEIVGRLLNHTPLSITGQRYVKPSLDALR 352 >UniRef50_C5DAW2 Integrase family protein n=7 Tax=Bacillaceae RepID=C5DAW2_GEOSW Length = 301 Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 61/210 (29%), Positives = 96/210 (45%), Gaps = 23/210 (10%) Query: 228 YRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRS 287 YR + +S Y K + +I D + P + SK + +L+ F + Sbjct: 75 YRRISCLKSFSKYCVK-ENLIDNDFMIGIDT----PKTDSKLPTYMSLSELRKLFHFLEQ 129 Query: 288 LNNPIA---SAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVS 344 N+ +A ++L TG RR EI L W +D +++RI K + ER++PL P V Sbjct: 130 DNSRMAMRNHLLFKLLATTGMRRSEIVELTWEQIDLSNNTIRIYGKGKKERLLPLHPMVV 189 Query: 345 ELLNVLAQS-PNSDVNKEGWVFRSNSKSGKIIEPRSAH---NRALVLAELP--HISLHGL 398 L+ +S ++ VF +K+GK + PR H L A LP SLH L Sbjct: 190 PLMKSYMESLEEYQLHPSQPVFL--NKNGKKLNPRGLHKIFKDILQKAGLPPQRFSLHHL 247 Query: 399 RRSFGTL-----AEWVEVPTGIVAQIMGHK 423 R +F TL E V++ T V +++GH+ Sbjct: 248 RHTFATLLIQENKENVDLRT--VQELLGHE 275 >UniRef50_B8J4X3 Integrase family protein n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J4X3_DESDA Length = 398 Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 14/169 (8%) Query: 271 DCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI-KD 329 + L KE+ + A ++ N A + + TG RR E+ L+W+ +DF+ + I + Sbjct: 206 EMLTKEERARFIEAAKAAPNRKAGQLMLMAYYTGMRRNELFGLKWAHIDFEHGFINIVGE 265 Query: 330 KIEGERI-----IPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRA 384 K EG + IPL+P V ELL + N +VF ++I+ N Sbjct: 266 KQEGAKSNRDERIPLSPPVRELLAEVGD------NGSEYVFPGKDGRSRMIDMNKQVNAI 319 Query: 385 LVLAELPHI--SLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKH 431 A LP LHGLR +F ++A VP V +++ HK L +++ Sbjct: 320 KAAAGLPKDFRPLHGLRHTFASVAVSNGVPLSHVQKLLTHKDPTLTQRY 368 >UniRef50_Q2GBL9 Phage integrase n=3 Tax=cellular organisms RepID=Q2GBL9_NOVAD Length = 417 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 90/385 (23%), Positives = 155/385 (40%), Gaps = 58/385 (15%) Query: 51 FLWDADVTTLACRAT-SGAKAFVFQSVYAGK---TLRMTIG-NINDWKIDDARAEARRLQ 105 FLWD D+ + T +GA ++V Q G+ T R TIG + + W ARAEA RL Sbjct: 22 FLWDTDLKGFGAKITPAGAISYVLQFRMGGREASTRRYTIGAHGSPWTPTTARAEAERLL 81 Query: 106 TLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTR 165 LI G+DP + A+ ++ + +A+ +Y + R R Sbjct: 82 LLIGQGVDP-------------VDADKQRRREAVDLAFANYAERFARSCKGDGWR----R 124 Query: 166 YIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTA 225 + I L KK ++ N+P ++ NR V A Sbjct: 125 LVERAIRLYLTPVLGKKALPAINRTDVVSVFDNMPADQVA-------------NRRNVFA 171 Query: 226 HAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAV 285 +LR +W+ + GDL + P + L ++L+ ++A Sbjct: 172 ----VLRRLFRWA--------VSRGDLDRSPMEGMETPPPVKARERWLSDDELRLIWNAA 219 Query: 286 RSLNNPIASAYLQVLLLTGARREEIASLRWSDV---DFKWSSMRIKDKIEGERIIPLTPY 342 + +++L+ TG RREE++ +RWS++ D W+ + K IPL Sbjct: 220 PECHRCFGP-IVRLLIATGQRREEVSGMRWSELSRTDKLWTLPGDRTKNGEPNTIPLNDL 278 Query: 343 VSELLNVLAQSPNSDVNKEGWVFRSNSKSG--KIIEPRSAHNRALVLAE---LPHISLHG 397 L+ A + ++G VF +++ +G + + +R + LAE LP LH Sbjct: 279 AVAELD--AAAGGDKWPRKGRVFATSTGAGFTGYAKGKDKLDRLIELAEGEPLPPWRLHD 336 Query: 398 LRRSFGTLAEWVEVPTGIVAQIMGH 422 LRR+ T + + V + ++ H Sbjct: 337 LRRTLATNFQRLGVRFEVTEAVLNH 361 >UniRef50_B5J7N6 Site-specific recombinase, phage integrase family protein n=1 Tax=Octadecabacter antarcticus 307 RepID=B5J7N6_9RHOB Length = 376 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 93/429 (21%), Positives = 169/429 (39%), Gaps = 80/429 (18%) Query: 38 LRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTIGNINDWKIDD 96 L+ LPE + T+ WD ++ R + G+K+FV V+ R T+G + Sbjct: 11 LKSLPLPERGQATY-WDETISGFGVRVSQGGSKSFVV--VHGVNRQRETLGRYPTITLKQ 67 Query: 97 ARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISA 156 AR +A++L I G+ + + +A L E+ +TK + Sbjct: 68 ARGQAKKLLAQITLGVQQN--RTISYKDARDLFLEACETK------------------NK 107 Query: 157 KTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWL--- 213 K Y + + H +KR L E+T I + Sbjct: 108 KNTVDYYRKRLDAHFRFG------RKR-----------------LDEITRTDIQTRIRKI 144 Query: 214 --STERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKA-D 270 S+ QN HA+ ++R + W+ +++Y P + M P + +A D Sbjct: 145 KTSSSEQN------HAFVVIRTLMNWA-VREQYVDQSP--------IASMKPPTKPQARD 189 Query: 271 DCLQKEQLKSWFSAVRSLNNPIA-SAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKD 329 L ++L + SL +P + +L+LTG RR E+AS+RW + ++ I Sbjct: 190 HVLTDQELIQAYKV--SLEHPYPFGPIISLLVLTGMRRSEVASMRWDWISHGERTITIPA 247 Query: 330 KIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIE--PRSAHNRALVL 387 + + + PY + VL P + +F S S++G + +S L Sbjct: 248 DVTKNKRVQTLPYADLVEAVLETIPEIGPH----LFPSRSETGTVFNGWGKSKERFDASL 303 Query: 388 AELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGH---KPSALAEKHYRRRPLDLLRKWH 444 + +LH LRR+F T + P + +++ H S +A + R +D +R Sbjct: 304 ENIEPYTLHDLRRTFATTHAKIGTPIHVTEKLLNHISGTISGVAAVYNRHSYMDEMRTAV 363 Query: 445 EKIETWILN 453 + +T++ N Sbjct: 364 TEYDTYLEN 372 >UniRef50_B2HWC8 Integrase n=6 Tax=Acinetobacter RepID=B2HWC8_ACIBC Length = 457 Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 106/448 (23%), Positives = 188/448 (41%), Gaps = 65/448 (14%) Query: 32 KFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIGNIND 91 KFT + L E +KQ F D F + + GK+ R IG Sbjct: 6 KFTKSVIDSIPLSE-EKQIFYRDTVTIGFGLCVGKTKSYFAEKKMPNGKSKRKVIGKHGV 64 Query: 92 WKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKV-TFSVAWEDYLQEL 150 + ++ AR EA+RL L+D G+DP K + A ++Q ++ + V T S A++ Y +L Sbjct: 65 YTLEQARTEAKRLLILMDEGVDP--VKQKRDLRASAIQNDALQKLVPTLSEAYQYY--KL 120 Query: 151 RTGISAKTKRPYS---TRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPD 207 R ++ + Y Y +D +L + TSA + +L LS+ +P Sbjct: 121 RKKLAETSLIAYDGCIENYFSDWKDL---------KLDQITSAMIIDR--HLKLSKASP- 168 Query: 208 YIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRK-MVPVSA 266 R N + HA L I S Y+ + I N++ +V V Sbjct: 169 --------SRANLASKFLHA--LFNHTI--SRYKDESGNKI-------LNIKNPVVIVKE 209 Query: 267 SKADDCLQK-------EQLKSWFSAVRSL------NNPIAS----AYLQVLLLTGARREE 309 KA + +++ +Q ++W AV + NN + +L +L LTG RR E Sbjct: 210 EKAFNKIKRRKGHVRADQREAWALAVATTYWMGEQNNDFRAYTNQDFLFLLALTGFRRSE 269 Query: 310 IASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNS 369 S+ W +VD ++ +++I + E + L P L +++ + +VF + Sbjct: 270 AESVEWKNVDLQFGTIKIINTKNHEDL--LLPMGDTLWHIMRERKKR-AGDNKYVFTDRN 326 Query: 370 KSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAE 429 I + R+A ++ + + + H LRR+FGT+A + + + + +++ H Sbjct: 327 GVSHISDRRAARDKVTENSGIE-FTFHDLRRTFGTIANSLAIGSYTIKRLINHTTDDDDN 385 Query: 430 KH---YRRRPLDLLRKWHEKIETWILNE 454 Y + D L+K IE I++E Sbjct: 386 DVTDGYIQVSFDDLKKAMNMIEDVIISE 413 >UniRef50_A1TXN0 Phage integrase family protein n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TXN0_MARAV Length = 396 Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 64/227 (28%), Positives = 104/227 (45%), Gaps = 25/227 (11%) Query: 245 QGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVR--SLNNPIASAYLQVLLL 302 +G+I + K+ S L ++K ++ A+ SL+ + +A L+ +LL Sbjct: 170 KGLIDENPCYGLQPSKLGASKGSPRSRVLTPSEMKRFWEALEDSSLDTSVRAA-LKAILL 228 Query: 303 TGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEG 362 TG RR EI +WSD+DF + + +I R P + L N+L QS + D Sbjct: 229 TGLRRGEICQAKWSDIDFNTNVWNLPPEITKSRRKHTVPISTALKNLL-QSLDMDGT--- 284 Query: 363 WVFR----------SNSKSGKI-----IEPRSAHNRALVLAELPHISLHGLRRSFGT-LA 406 +VFR SNS + I I+ + + +A + L S+H LRR+ T L Sbjct: 285 YVFRSTRAPWQPIGSNSLTTAIARLQGIKTQQVNEKAPLFG-LERFSVHDLRRTVATGLG 343 Query: 407 EWVEVPTGIVAQIMGHKPSALAEKHYRRRPL-DLLRKWHEKIETWIL 452 E+ E P ++ +I+ H E Y+R L D K E+ TW++ Sbjct: 344 EYCETPPHVIRRILNHLSDDRLEDIYQRATLFDEQAKALERWSTWVM 390 >UniRef50_B9Z851 Integrase family protein n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z851_9NEIS Length = 407 Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 101/445 (22%), Positives = 184/445 (41%), Gaps = 61/445 (13%) Query: 29 SRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAF-VFQSVYAGKTLRMTI 86 +R FT L +P ++ D L R T + K F VF+ V G R++I Sbjct: 3 TRIVFTKAALTNLPVPAAGQRFTFHDTKQPGLQLRVTPNNVKTFAVFKRVAGGSPERVSI 62 Query: 87 GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKV------TFS 140 G + ++ ARA+AR + + TG+ SL A R+ K T Sbjct: 63 GRFPEVTVEQARAKAREVVNALATGV--------------SLSAGKRQAKAKAAAVPTLG 108 Query: 141 VAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLP 200 A +Y++ R K +P STR+ D++ + G KR G L L + Sbjct: 109 DAVREYVERARRA-DGKPLKP-STRH--DYLKMVEPG--VTKRTGRKCKDGMLLKLAEIR 162 Query: 201 LSELTPD-----YIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGD-LAQ 254 + ++T D Y AA ERQ +A ++LRA + + Y +PG ++ Sbjct: 163 IDQITADDIHRVYDAAAAHGERQQ-----TYAMQVLRAVLNF------YGVAVPGSPFSK 211 Query: 255 DYNVRKMVPV-SASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASL 313 D R + + A AD ++ E + W+ A+ + + YL+ L LTG R E + Sbjct: 212 DTPRRNRISLPPAQPADKSIEPEDIGRWWLALSEMEDTPTVRYLKFLALTGCRPSEPLEI 271 Query: 314 RWSDVDFKWSSMRIKD-KIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSG 372 + +D + + D K + ++ Y+S + + ++ + + +F++ Sbjct: 272 KVEKIDAAHRCVVLLDTKTRTDHVL----YLSNQAWGIVERQMANKSADERLFKAAYDFY 327 Query: 373 KIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSA-LAEKH 431 + E R + S LR +F ++AE + V T + ++M H+ + + +H Sbjct: 328 AVAEIREKCG--------VYFSRKMLRSTFASIAEPL-VSTYTLKKMMNHRQAGDITARH 378 Query: 432 YRRRPLDLLRKWHEKIETWILNEAG 456 Y R+ LR + + ++ +A Sbjct: 379 YIRKSEQQLRAGWQAVADYLDQQAA 403 >UniRef50_Q1RJE3 Integrase n=9 Tax=Rickettsia RepID=Q1RJE3_RICBR Length = 388 Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 47/184 (25%), Positives = 88/184 (47%), Gaps = 18/184 (9%) Query: 270 DDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKD 329 D L +E++ +F+A+ N + + + L T R++ + ++RW + F + + D Sbjct: 205 DRYLTREEIPRFFTAISEEQNQVMKDFFLIALYTSVRKDNVLTMRWEQISFADKQLYLPD 264 Query: 330 KIEGE-RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRS-NSKSGKIIEPRSAHNRALVL 387 G+ +PL E+L + +S WVF S S SG + EP+ A R Sbjct: 265 TKNGDPHRLPLLDQAVEILKARKEQSDS-----IWVFPSETSSSGHLQEPKKAWKRICKK 319 Query: 388 AELPHISLHGLRRSFGTLAEWVEVPTG----IVAQIMGHK-PSALAEKHYRRRPLDLLRK 442 A + ++ +H LRR T+ W+ + TG ++ Q++ H+ P + A Y R D R+ Sbjct: 320 AGIENLRIHDLRR---TIPSWMAM-TGANQYVIGQLLNHRDPRSTAV--YTRLATDTARE 373 Query: 443 WHEK 446 + ++ Sbjct: 374 YMQR 377 >UniRef50_A6Q4N1 Site-specific recombinase, phage integrase family n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q4N1_NITSB Length = 412 Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 88/362 (24%), Positives = 142/362 (39%), Gaps = 61/362 (16%) Query: 66 SGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEA 125 +G K F VYAGK TIG+ + AR ++ LI GIDP K + Sbjct: 38 NGRKIFRLDYVYAGKRNTYTIGDYPQISLAQARKIKYEVKELIKNGIDPNRYKQEQ-KRI 96 Query: 126 ESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQ 185 + L+A + T S E ++Q K K R ++IN Sbjct: 97 KELEANKKFT----SFVIERFIQH-------KAKEVSKARLQKNYIN------------- 132 Query: 186 GPTSAGPLASLL-NLPLSELTPDYIAAWLST------ERQNRPTVTAH----AYRLLRAF 234 T A + + + + E+T I + ++ NR T + YRLL++ Sbjct: 133 --TFANYITPFIGEVKIDEVTKQDIIKIVKNTYSTKLQKDNRSTGKTYKAREVYRLLKSL 190 Query: 235 IKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIAS 294 ++ + Q + A ++ ++P + E++K + + SL NP Sbjct: 191 FDFAIHNDYTQT----NPAVGIDIDSLIPKHKPTRHKAVTNERIKEIYQKICSLQNPYFR 246 Query: 295 AYLQVLLLTGARREEIASLRWSDVDFK-----WSSMRIKDKIEGERIIPLTPYVSELLNV 349 LQ + LT R +A+L+W DF + + +K K + R IPLT ++ V Sbjct: 247 LPLQYIALTAVRFGNVANLKWDYKDFDKRVIIYPAEAMKTKNQPFR-IPLT---DAIVKV 302 Query: 350 LAQ-----SPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGT 404 + Q SP S++ VF S + K I + + P LHG R SF T Sbjct: 303 IQQAKAIASPYSEI-----VFGSPINAHKPISDNTLRKVLKIDLNEPEQDLHGFRSSFET 357 Query: 405 LA 406 +A Sbjct: 358 IA 359 >UniRef50_B0PGN1 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0PGN1_9FIRM Length = 402 Score = 61.2 bits (147), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 53/191 (27%), Positives = 78/191 (40%), Gaps = 26/191 (13%) Query: 261 MVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDF 320 +VP + + L KEQ++++ +AV N I + L TG RR EI L W D D Sbjct: 177 VVPKANHRPKQILTKEQMETFLAAVE--RNEIWRDFFYTELTTGLRRGEICGLMWQDFDE 234 Query: 321 KWSSMRIKDKI----------------EGERIIPLTPYVSELLNVLAQSPNSDVNKEGWV 364 K +++I + +G R I L P + L Q S W+ Sbjct: 235 KAGTLKILRSVNVPKAGELEIGETKTSQGRRTIRLPPSTVQRLRERKQHAVSQ-----WI 289 Query: 365 FRSNSKSGKIIEPRSAH---NRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMG 421 F K + P +A+ R L A LP I H LR +F T A V ++ I+G Sbjct: 290 FPEPLAPEKPVRPSAAYYWMKRILREAGLPTIRFHDLRHTFATHALTSGVDAKTLSGILG 349 Query: 422 HKPSALAEKHY 432 H ++ Y Sbjct: 350 HTNASFTLDTY 360 >UniRef50_Q88UJ5 Prophage Lp3 protein 1, integrase n=1 Tax=Lactobacillus plantarum RepID=Q88UJ5_LACPL Length = 385 Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 44/195 (22%), Positives = 84/195 (43%), Gaps = 31/195 (15%) Query: 259 RKMVPV-----SASKADDCLQKEQLKSWFSAVRSLNN-PIASAYLQVLLLTGARREEIAS 312 R +VPV S ++ K +L+ +F + +N P AS + ++ TG R+ E+ Sbjct: 160 RVIVPVNKNDRSRKNLENYFDKAELQHFFECLTDDDNTPQASVFFRLAAFTGMRKSEMLC 219 Query: 313 LRWSDVDFKWSSMRI---KDKIEGERIIPLTPYVSELLNVLAQSPNS-------DVNKEG 362 L WSD+DF ++R+ + + +G R++ P + + P + V+++ Sbjct: 220 LEWSDIDFSNHTIRVNKTQSRGDGARLLVQAPKTARSNRTVYLDPTTIKILQHWQVDQKK 279 Query: 363 WVFR---------------SNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAE 407 W+ R N++ + +PR L +L H+++H R ++ TLA Sbjct: 280 WLLRFGFNINQGNHYVFANENNEMFQPSKPRKWLEHTLTKYDLKHVTVHAFRHTYATLAF 339 Query: 408 WVEVPTGIVAQIMGH 422 V +GH Sbjct: 340 EAHASIKSVQDQLGH 354 >UniRef50_A9W3V7 Integrase family protein n=1 Tax=Methylobacterium extorquens PA1 RepID=A9W3V7_METEP Length = 429 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 40/139 (28%), Positives = 61/139 (43%), Gaps = 5/139 (3%) Query: 293 ASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQ 352 A + +Q+L LTG R EIA+LRW++VDF +R+ + EG I PL LL + + Sbjct: 252 AVSSIQLLCLTGCRMREIANLRWTEVDFAGRCLRLDNTKEGRSIRPLGQAAVALLRQIEE 311 Query: 353 SPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVP 412 +V + G A R A LP I H LR SF + A + Sbjct: 312 RRAGP-----YVLPATRGEGGFGGIPDAIERYSKRAGLPGIGAHTLRHSFASTAADLGCS 366 Query: 413 TGIVAQIMGHKPSALAEKH 431 + ++GH + ++ Sbjct: 367 DSTIGAMLGHAGHGVTSRY 385 >UniRef50_C1SNQ2 Site-specific recombinase XerD n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SNQ2_9BACT Length = 342 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 63/137 (45%), Gaps = 11/137 (8%) Query: 289 NNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI-KDKIEGERIIPLTPYVSELL 347 +NP+ A+ +LTG RR E L W D+DF + I K K R IP+ + ELL Sbjct: 175 DNPLRHAFF-FYVLTGCRRSEALVLTWDDIDFTRMVVHIRKTKNHEARDIPICDSLYELL 233 Query: 348 NVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHN--RALVLAELPHISLHGLRRSFGTL 405 N + +P K+G++F K + + HN L A P + LH LR +F +L Sbjct: 234 NGI--TP-----KQGYLFPGKIKGTHLDKDTMTHNIKDCLTEAGFPDMRLHDLRHTFASL 286 Query: 406 AEWVEVPTGIVAQIMGH 422 + ++GH Sbjct: 287 LALSGETLQTIRDLLGH 303 >UniRef50_B4BIA4 Integrase family protein n=2 Tax=Geobacillus RepID=B4BIA4_9BACI Length = 384 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 58/234 (24%), Positives = 101/234 (43%), Gaps = 30/234 (12%) Query: 251 DLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQV----LLLTGAR 306 D A +++ K+ PV +K +E++ V N I + +++ + TG R Sbjct: 146 DQAVKWSLVKVNPVKNAKPPKVKSEEKITWTVDEVNRFLNLIKDSSMEIPYLLAIFTGMR 205 Query: 307 REEIASLRWSDVDFKWSSMRIKDKI----------------EGERIIPLTPYVSELLNVL 350 R E+ L+W DVDF+ +RIK + + +R I ++ +V +L Sbjct: 206 RGEVLGLKWDDVDFENKKIRIKRSLCFVSGKGLIFKEPKTKKSKRQISISQHVVNVLKKH 265 Query: 351 AQSPNSDVNKEGWVFRSN-----SKSGKIIEPRS---AHNRALVLAELPHISLHGLRRSF 402 Q K G ++ N + GK ++PR+ R + A +P IS H LR + Sbjct: 266 KQKQEFQKEKLGVQYQDNNLIVCTDDGKPLDPRNLLRQFYRLIEEANVPRISFHDLRHTH 325 Query: 403 GT-LAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWILNEA 455 T L + E P +V++ +GH + Y DL + EK E +L ++ Sbjct: 326 ATILMQQGENPK-VVSERLGHSRVGITLDLYSHVSDDLQEQAAEKFENALLKQS 378 >UniRef50_B6R5P1 Phage integrase n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R5P1_9RHOB Length = 365 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 4/164 (2%) Query: 290 NPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNV 349 NP A +++L LTGARR EI L+WS+V + ++ +D G++ IP++ V LL Sbjct: 200 NPKAVKIIKLLALTGARRGEIEQLKWSEVFLEQGTLHFEDSKTGQKSIPISAAVIGLLRE 259 Query: 350 LAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWV 409 Q D +VF S G + + +H LR SF +LA Sbjct: 260 AEQERCIDSP---YVFPSERGDGFYVGATKVWRDLRTKFGDEKLRMHDLRHSFASLAVAG 316 Query: 410 EVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWILN 453 ++ ++GHK +A ++ Y D LR +++ +L Sbjct: 317 GASLPMIGALLGHKDTATTQR-YAHLSADPLRSISDQVGAKLLG 359 >UniRef50_UPI00003841F3 COG0582: Integrase n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI00003841F3 Length = 394 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 29/69 (42%), Positives = 39/69 (56%), Gaps = 1/69 (1%) Query: 47 KKQTFLWDADVTTLACRATS-GAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQ 105 + Q F WDADV R T+ GAK+F+ G+ R+TIG+ DW + AR EA L+ Sbjct: 18 RPQVFFWDADVKGFGLRVTNRGAKSFILDYRIGGRQRRITIGSYPDWSVAAARTEAGNLK 77 Query: 106 TLIDTGIDP 114 +D G DP Sbjct: 78 REVDLGNDP 86 Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust. Identities = 34/154 (22%), Positives = 67/154 (43%), Gaps = 10/154 (6%) Query: 273 LQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFK---WSSMRIKD 329 L E+L +A+ + + P+++ +++L+LTGAR+ E+ W D W+ Sbjct: 204 LSPEELSRLSAALTAHHEPVSADAIRMLMLTGARKSEVLGATWEMFDLDAGVWTKPSAHT 263 Query: 330 KIEGERIIPLTPYVSELLNVLAQSPNSDVNKEG-WVFRSNSKSGKIIEPRSAHNRALVLA 388 K E +P++ LL + ++ EG +VF + + + + A Sbjct: 264 KQRKEHRVPVSANALTLLKRIRET------AEGPYVFPGKGGDQPLTDVKRSWAAVCKAA 317 Query: 389 ELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGH 422 ++ +H LR SF +L I+ ++GH Sbjct: 318 DITGARIHDLRHSFASLLVSGGASLPIIGAMLGH 351 >UniRef50_Q5LLE0 Site-specific recombinase, phage integrase family n=2 Tax=Rhodobacteraceae RepID=Q5LLE0_SILPO Length = 400 Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 80/377 (21%), Positives = 152/377 (40%), Gaps = 71/377 (18%) Query: 64 ATSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIA 123 +TSG K F +GK R+TIG + +AR R++ I+TG Sbjct: 36 STSGTKTFCLHKRISGKMRRLTIGRFGVVSLAEARERVRKVLYEIETG------------ 83 Query: 124 EAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYST---RYIADHINLSSRGGES 180 +ED RTG+ +TK YI H + +R + Sbjct: 84 ------------------RFED-----RTGVEVETKPTLGDVIPDYIEKHAKVHNRDWKR 120 Query: 181 KKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNY 240 K+ A+L + E+ + ++ P A L+ + W Sbjct: 121 KE-----ALLAKFAALHVKRIDEIKRADVVKACDLIHKSAPVSANRALAHLKHLMGWCVE 175 Query: 241 QKKYQGIIPGDLAQDYNVRKMVPVSASKADD-CLQKEQLKSWFSAVRSLNNPIASAYLQV 299 + G+I + M P+S ++ + L ++L + ++A + P +++ Sbjct: 176 R----GMIDAS-----PIAGMKPLSKERSRERVLTDDELGALWTACDAEGYPFGDC-MKL 225 Query: 300 LLLTGARREEIASLRWSDVDFK---WSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNS 356 L+L+G RR E+A +RW+++D + W+ + K + +P+T + ++L + + S Sbjct: 226 LILSGQRRAEVAEMRWTELDLEKRLWTLPSQRAKNGRQHTVPITDAMIDVLRRVPRFLGS 285 Query: 357 DVNKEGWVFRSNSKS-----GKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEV 411 D +VF + KS G++ + ++AL P I +H LRR+ T + V Sbjct: 286 D-----YVFTTTGKSPVSGFGRL---KDRLDKALPEGTEPWI-IHDLRRTMSTNMAMLGV 336 Query: 412 PTGIVAQIMGHKPSALA 428 P + ++ HK ++ Sbjct: 337 PQPVTEALLNHKTGVVS 353 >UniRef50_Q6LTT6 Hypothetical integrase n=1 Tax=Photobacterium profundum RepID=Q6LTT6_PHOPR Length = 446 Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 103/413 (24%), Positives = 175/413 (42%), Gaps = 61/413 (14%) Query: 66 SGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRI---AKAVKI 122 SG+K+F F+ K + + IG + DAR +A+ + G DP+I A+ +I Sbjct: 38 SGSKSFYFRYYKDLKPVFILIGKFPAVSLSDAREKAKIYGAMWSDGKDPKIELQAERERI 97 Query: 123 AEAESL----QAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGG 178 E E++ Q E+ K + + + Y+ EL + KR + AD + S+ Sbjct: 98 -EQETVKLKAQQEAEKRQGSVGQLLDSYINELVLREKSSFKR-VGKAFEADVYGVISKDT 155 Query: 179 ESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYR--LLRAFIK 236 ++K ++TP I+ LS + V ++ R L AF Sbjct: 156 KAK---------------------DITPQDISIVLSKIIKRGAEVQSNKVRSYLHAAF-- 192 Query: 237 WSNYQKKYQGIIPGDLAQD--YNVRKMVPVSASKADDCLQKEQL-KSWF--SAVRSLNNP 291 N+ ++ P +L Q+ +N+ PVS+ L E + +W VR L N Sbjct: 193 --NFGLRHD-YDPKNLGQEVFFNL-SFNPVSSVPKQ--LNAENVGDNWLKMDEVRYLVNA 246 Query: 292 IASAYLQ---------VLLLTGARREEIASLRWSDVDFKWSSMRIK---DKIEGERIIPL 339 S Y L L G R ++A+ WS VDF + + K + +IPL Sbjct: 247 DCSEYFSEEHLLLLKLCLYLGGQRPFDLANSYWSAVDFAERTFEMSMRASKTDKPNLIPL 306 Query: 340 TPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPR--SAHNRALVLAELPHISLHG 397 T +LL +L + + +E ++F + ++SG + R A R + + Sbjct: 307 TETAIKLLKLLRKIHPPKIGQECFLFPAKTESGHLDTNRFGKAVKRFCDDTKFKKFTPRD 366 Query: 398 LRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETW 450 LRR+F TLA +EV I +I H + ++ KHY R + +++ E +E W Sbjct: 367 LRRTFKTLAGALEVSKDIRDRIQNHALNDVSSKHYDR--YEYIKEKREALELW 417 >UniRef50_B3CTI8 Putative integrase n=7 Tax=Orientia tsutsugamushi str. Ikeda RepID=B3CTI8_ORITI Length = 379 Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 72/155 (46%), Gaps = 7/155 (4%) Query: 270 DDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKD 329 D + E++ + +AV NP ++ + L T ARR + S+RW ++ + I + Sbjct: 194 DRYITLEEMPRFLAAVEEDKNPYLKYFVYISLYTAARRNNVLSMRWENIRLEEGVWYIPE 253 Query: 330 KIEGE-RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSK-SGKIIEPRSAHNRALVL 387 GE + +PL + E L + S S+ WVF + SG + A R Sbjct: 254 TKNGESQTVPLINLLIEKLKQYSYSSESE-----WVFPGQRRNSGHLTSINVAWKRVCKR 308 Query: 388 AELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGH 422 A L ++ +H LRR+ G+ +P ++++++ H Sbjct: 309 AGLKNLRIHDLRRTVGSWMAKFGMPIAVISKLLNH 343 >UniRef50_C5SDM2 Integrase family protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SDM2_CHRVI Length = 398 Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 101/420 (24%), Positives = 161/420 (38%), Gaps = 49/420 (11%) Query: 46 GKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRL 104 G ++ +WD D R SG KAFV G+ MTIG +D AR +AR Sbjct: 17 GNERFVVWDDDPPGFGLRIYPSGRKAFVLSYRSQGRKRLMTIGTYGVLTLDQARIQARAE 76 Query: 105 QTLIDT-GIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYS 163 ++T G DP +A + A+ E TF + Y++ R G AK Sbjct: 77 LAKVETQGADP-LAVRQRQAQGE-----------TFRDLCQTYME--RHG-QAKKSGTDD 121 Query: 164 TRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTV 223 R I H+ PL L +P +T +AA S + P Sbjct: 122 QRRIDRHLL-------------------PLWGSLKVP--AVTRADVAALHSKIGKAHPY- 159 Query: 224 TAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFS 283 A R+L K + +++ G +P R + +K D + E+L Sbjct: 160 --EANRVLALLSKMFDLARRW-GFVPE--GHPNPARDIDRFKEAKRDRWVTPEELPRLAQ 214 Query: 284 AVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYV 343 A+ N A L + LLTGAR+ E+ RW DVD+ + +RI D G + P Sbjct: 215 AINEEPNQSARFGLWLYLLTGARKSELLRARWDDVDWTRAELRIPDTKAGR--VHYIPLS 272 Query: 344 SELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFG 403 + L +L + P N + ++ +R A + + +H LRR+ G Sbjct: 273 AAALALLREIPRVAGNPH--ILPGKLDGAHLVNINKPWDRVRRAAGVEDVRVHDLRRTVG 330 Query: 404 TLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWILNEAGITIKNNV 463 + ++ +++ H + Y R D +R E+ I+ AG+T +V Sbjct: 331 SWLAQAGNSLHLIGRVLNHSNQSTTAI-YARFGEDSVRAALEQHGARIIGAAGLTPSADV 389 >UniRef50_Q2RHJ2 Phage integrase n=3 Tax=Firmicutes RepID=Q2RHJ2_MOOTA Length = 390 Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 108/257 (42%), Gaps = 40/257 (15%) Query: 193 LASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDL 252 + +L ++PL +L P I +++ ++ ++ R + + + Q + G+ L Sbjct: 104 IPTLGSIPLKKLQPADIQRLYASKLES--GLSPTRVRYIHVVLHEAMSQARESGL----L 157 Query: 253 AQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIAS 312 Q+ P K L EQ+K + + +P+ A+L + L TG RR EI Sbjct: 158 LQNPTEAAKPPRHPKKKVQPLNPEQVKRFLETAK--QDPLYPAFL-LALGTGLRRGEILG 214 Query: 313 LRWSDVDFKWSSMRIKDKI----EG-----------ERIIPLTPYVSELL---------N 348 LRW D+D + ++++ + EG R IPL P V L N Sbjct: 215 LRWQDLDLQKGILQVRQSLIRTREGLKFEEPKTEKSRRQIPLPPSVVAALKRHKAWVNQN 274 Query: 349 VLAQSPNSDVNKEGWVFRSNSKSGKIIEPRS---AHNRALVLAELPHISLHGLRRSFGTL 405 L P D VF ++G+ +P+ NR L A LPHI LH LR + TL Sbjct: 275 KLILGP--DYEDHDLVF--PVENGRPRDPKGFAEYFNRLLDKAGLPHIRLHDLRHTHATL 330 Query: 406 AEWVEVPTGIVAQIMGH 422 V +V + +GH Sbjct: 331 LLLEGVHPKVVQERLGH 347 >UniRef50_A3V904 Phage integrase n=5 Tax=Rhodobacteraceae RepID=A3V904_9RHOB Length = 445 Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 88/376 (23%), Positives = 139/376 (36%), Gaps = 68/376 (18%) Query: 44 PEGKKQTFLWDADVT--TLACRATSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEA 101 P K++ +D V L R + G ++ + KT + + N+ D + AR Sbjct: 17 PSTKRKEVFFDRRVKGLVLEVRTSGGMTYYMRYTDDRSKTRYIKLANVGDITLPQARGLC 76 Query: 102 RRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRP 161 R+ + + GIDP +AVK + TF D+++E + KR Sbjct: 77 RQHRNKLALGIDPLAERAVK------------RLVPTFG----DFVRERYLPFAQANKRS 120 Query: 162 YSTRYIADHINLSSRGG----------ESKKRGQGPTSAGPLASLLNLPLSELTPDYIAA 211 + T +L+ + G + Q AG + +N L L + A Sbjct: 121 WKTDETLARTHLTPQLGTMHMDEITIEDVLSLQQIGLKAGAAPASINRRLILLRYMFNLA 180 Query: 212 WLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADD 271 W + H RLL K +N +++Y Sbjct: 181 WRDWKIAGVTGNPTHGVRLL----KENNQKERY--------------------------- 209 Query: 272 CLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKI 331 ++ E+L + AV+ N + + LLLTG RR E+ W DVD RI Sbjct: 210 -VRAEELALLYRAVKESQNKMLQHIVAFLLLTGTRRNEVLHATWEDVDLIKGMWRIPQTK 268 Query: 332 EG-ERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGK-IIEPRSAHNRALVLAE 389 G R +PL +L + S ++F N K+GK + A N A V A Sbjct: 269 SGFARHVPLNDGAYAVLQQMQGRSQSH-----YIF-GNPKTGKPYVHVWYAWNSARVKAG 322 Query: 390 LPHISLHGLRRSFGTL 405 LP + LH LR +F +L Sbjct: 323 LPDVRLHDLRHTFASL 338 >UniRef50_A8L4Q7 Integrase family protein n=9 Tax=Actinomycetales RepID=A8L4Q7_FRASN Length = 477 Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 52/200 (26%), Positives = 87/200 (43%), Gaps = 42/200 (21%) Query: 258 VRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSD 317 VR + P A + + L+ E+L++ F+ L+ G RR EI LRWSD Sbjct: 256 VRALRPEEARRLVEVLRGERLEAVFACG---------------LMLGLRRGEILGLRWSD 300 Query: 318 VDFKWSSMRIK---DKIEG------------ERIIPLTPYVSELLNVLAQSPNSDV---- 358 VD +++ ++ +++G R +P+ P + +L + ++ Sbjct: 301 VDLDGATLHVRQTLQRVDGSLMFVPAKTERSHRRLPIPPKLVTILRRHRATQTAERTGLG 360 Query: 359 ---NKEGWVFRSNSKSGKIIEPRSAHNRALVL---AELPHISLHGLRRSFGTLAEWVEVP 412 + G VF S G +EPR+ + R VL A LP + LH LR +F ++ VP Sbjct: 361 DAWTETGLVF--TSSIGTPLEPRNVNRRFDVLRRQAGLPWLRLHDLRHAFASMLFAEGVP 418 Query: 413 TGIVAQIMGHKPSALAEKHY 432 V +++GH L Y Sbjct: 419 ARTVMELLGHSTIQLTMNTY 438 >UniRef50_Q1K3L0 Phage integrase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3L0_DESAC Length = 417 Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 83/373 (22%), Positives = 142/373 (38%), Gaps = 59/373 (15%) Query: 66 SGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEA 125 +G++ F F+ + +T + +G + + + DA +A+ + +I G+DPR Sbjct: 48 NGSRKFHFKMTFLHETTFIALGALGEITLPDAVQKAQLYRQMIQEGLDPR---------- 97 Query: 126 ESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQ 185 +L KT F +Y ++ I K P +R++ L G Sbjct: 98 RTLTERRIKTLEKFC---HEYFEDF---IDQNHKHPKKSRHMLKRWILPVFG-------- 143 Query: 186 GPTSAGPLASLLNLPL----SELTPDYIAAWLST-----ERQNRPTVTAHAYRLLRAFIK 236 ++PL S L +++ L+T ER+ + A LL + Sbjct: 144 ------------HIPLKQIDSRLVSEFVQQILTTVSQKTERRISGSTAKQALSLLSKLFQ 191 Query: 237 WSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAY 296 + Q P D VR+ P + L ++ + A SL + + Sbjct: 192 CAIDQHLVDAN-PCD-----GVRR--PKVNRSRERYLSGDEYPRFIKATMSLIDRPQAKA 243 Query: 297 LQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGE-RIIPLTPYVSELLNVLAQSPN 355 + +L + G R E+ L W DV + + IK GE R + L +LL L + Sbjct: 244 IMILAVLGLRPSEVLGLAWCDVHLIDNRIHIKQAKNGESRFVTLNSVARDLLQQLY---D 300 Query: 356 SDVNKEGWVF--RSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPT 413 + + WVF R S +G + R +AELP +L+ LRRS T V Sbjct: 301 ARKKRAVWVFPSRGKSSTGHLQSVSKTFERICNMAELPEFNLYDLRRSHATFLLQSGVDL 360 Query: 414 GIVAQIMGHKPSA 426 + + + HK A Sbjct: 361 FTIKEALHHKTLA 373 >UniRef50_UPI0000383F7A COG0582: Integrase n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000383F7A Length = 371 Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 6/141 (4%) Query: 291 PIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVL 350 P A +++L LTG RR E +L W +VDF++ +++ D G + +PL +LL + Sbjct: 199 PAAIGVIRLLALTGMRRGEALALDWGEVDFEYGLLQLADSKTGRKSVPLGAAARQLLAAI 258 Query: 351 AQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVE 410 + G VFR S G + R A L + LH LR S+ + Sbjct: 259 PKPEGG-----GLVFRGPS-GGPVGGLPHIWERIRKRAGLDGVRLHDLRHSYAAVGASGG 312 Query: 411 VPTGIVAQIMGHKPSALAEKH 431 I+ I+GH +A +++ Sbjct: 313 QSLPILGAILGHSDTATTQRY 333 >UniRef50_Q82ZU2 Site-specific recombinase, phage integrase family n=2 Tax=Enterococcus faecalis RepID=Q82ZU2_ENTFA Length = 381 Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 44/185 (23%), Positives = 83/185 (44%), Gaps = 29/185 (15%) Query: 275 KEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKI--- 331 K++L +F ++ N A+ ++L TG R+ E+ +L+W D+D S+ I + Sbjct: 178 KQELNHFFDCLKQYGNFKQLAFFRLLAFTGCRKSEVLALQWKDLDITNKSVYIGKTVAQD 237 Query: 332 EGERIIPLTPYVS----------ELLNVLA-----------QSPNSDVNKEGWVFRSNSK 370 E I+ TP + E L ++A Q + ++E ++F +N Sbjct: 238 EFYNILTQTPKTASSTRSISLDNETLQIMAKWRTIQRSDYFQMGFNTSSEEQYIFTNN-- 295 Query: 371 SGKIIEPRSAH---NRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSAL 427 K++ P + N + +LP I+ H R + +L VP VA+ +GH +A+ Sbjct: 296 HNKLLSPNVVNIWLNCLIKKYDLPSITPHHFRHTHASLLLQSGVPIKEVAERLGHTSTAI 355 Query: 428 AEKHY 432 ++ Y Sbjct: 356 TDRIY 360 >UniRef50_B6ATL3 Phage-related integrase n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6ATL3_9RHOB Length = 420 Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 19/173 (10%) Query: 291 PIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI--KDKIEGER-IIPLTPYVSELL 347 PI YL+ ++ T R E A LRW VD S + D E ++PL+ + ++ Sbjct: 245 PIYQRYLRFMISTPLRAGEAAKLRWDQVDADRSELHFTHHDTKNSEHFVMPLSKIAANVI 304 Query: 348 NVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAE-LPHISLHGLRRSFGTL- 405 Q + +VF +S G + S NR + A + H LH LRR+F TL Sbjct: 305 WAFPQ------EQSRFVFPLSSLDGAQMSAWSHFNRCVRKASGIDHFILHDLRRTFSTLM 358 Query: 406 AEWVEVPTGIVAQIMGHKPSAL---AEKHYRR-----RPLDLLRKWHEKIETW 450 AE + I+ ++ HK SA +HY++ + D++ +W + +E W Sbjct: 359 AEHTDTSESIIDSLLNHKQSATRGGVMRHYQKAKNLEKRRDVMAQWGKLLEKW 411 >UniRef50_A4Y8Q0 Phage integrase family protein n=2 Tax=Shewanella RepID=A4Y8Q0_SHEPC Length = 443 Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 85/400 (21%), Positives = 166/400 (41%), Gaps = 87/400 (21%) Query: 66 SGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEA 125 SG K F F+ + GK + +TIG I++AR +A+ + + G++P AK + EA Sbjct: 43 SGKKVFRFRRKHLGKDVTVTIGEFPHLTIENARKQAKHIAVDLAEGVNPNEAKRLAKQEA 102 Query: 126 ESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYI----ADHINLSSRGGESK 181 E +A S + F +++ +++TG +R S + I +HI Sbjct: 103 ERKEALSISVQQLFDSFEAEFMVKIKTG----ERRLNSLKDIQSTWKNHIQ--------- 149 Query: 182 KRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQ 241 + +LP+ +T T A LL+ I ++ Sbjct: 150 ------------PRIAHLPVESIT------------------TVEAENLLKLIITKNSAA 179 Query: 242 KKYQGIIPGDLAQDYNVRKMVP------VSASKADDCLQKEQLKSWFSAVRSLNNPIASA 295 + + + L +N +++ P ++A K + L + ++++ ++ P+ Sbjct: 180 VRNKCLTL--LKSMFNEQQINPFGRIKKLAAVKRERILNQHEVRALLESL-EFEPPLYRD 236 Query: 296 YLQVLLLTGARREEIASLRWSDVDFK---WSSMRIKDKIEGERIIPLTPYVSELLNVLAQ 352 + +LLLTG R+ + S+ W ++D + W K K + +PLT E++ +L + Sbjct: 237 VVMLLLLTGQRKSCVFSMEWREIDHQRGMWIIPTSKIKSKKPHAVPLT---KEVMAILER 293 Query: 353 SPNSDVNKEGWVFRSN-SKSGKIIEP----------------RSAHNRALVLAELPHISL 395 + + +VF + S SG I E RS A A+ ++++ Sbjct: 294 RSHEAAHGVKYVFPAERSHSGHITENAGKGSFWYRITERAGLRSPEKSA--TAKEDNVTI 351 Query: 396 HGLRRSFGTLAEWVEVPTGIV---AQIMGHKPSALAEKHY 432 H LRR T+A W + G + ++++GH ++ Y Sbjct: 352 HDLRR---TIASWSVMRGGNIQTTSKLLGHSDISITASTY 388 >UniRef50_A3D8Y2 Phage integrase family protein n=4 Tax=Shewanella RepID=A3D8Y2_SHEB5 Length = 376 Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 72/311 (23%), Positives = 125/311 (40%), Gaps = 54/311 (17%) Query: 42 TLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAE 100 LP +K T +D RA SG + + + Y G IGN ND +DDAR E Sbjct: 13 NLPTPQKITVFYDKYFPAFFMRAYPSGIRCYYVRFQYQGLRQLHVIGNANDITLDDARLE 72 Query: 101 ARRLQTLIDTGIDPRIAKAVKI-AEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTK 159 AR+ + G+ A ++ + A AE + Y + + ++ Sbjct: 73 ARKHIDALRYGVVREPAPSLTLCAFAEEF--------------FPRYARHWKPSTLLNSQ 118 Query: 160 RPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQN 219 R + TR+IA L ++PL+ LT +I W + Sbjct: 119 RGF-TRHIA-------------------------PVLGDVPLAALTRQHIEQWFDGMHAS 152 Query: 220 RPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLK 279 + A RLL + Y+ AQ + ++ ++ L +E+LK Sbjct: 153 K----GMANRLLPLLSVMMQQAEVYEY----RPAQSNPCKGFKRYKSTHSERYLSEEELK 204 Query: 280 SWFSAVRSLN--NPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERII 337 + A+ S +P+A L++L+LTG R E+ S++W+ D++ + D G + + Sbjct: 205 RLWLALDSHEKASPVAVMVLRLLILTGCRCNEVCSVKWA--DYRQGHWYLPDSKTGAKTV 262 Query: 338 PLTPYVSELLN 348 L+ + ELL+ Sbjct: 263 FLSSFARELLS 273 >UniRef50_B9MQ70 Integrase family protein n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MQ70_ANATD Length = 325 Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 35/209 (16%) Query: 245 QGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTG 304 Q I G + Q+ + +P L EQ+ ++ A ++ + + A+L + L TG Sbjct: 92 QAIKCGYINQNVSEAVALPKVERPEIKTLSSEQVTTFLQAAQT--DSLYPAFL-LELYTG 148 Query: 305 ARREEIASLRWSDVDFKWSSMRIKDKI---------------------EGERIIPLTPYV 343 RR E+ L+W D+DF ++ +K + G R+IP+ +V Sbjct: 149 LRRGELLGLKWDDIDFDNCTIHVKRSLVRVYDHNLKKTTLLLQPPKTKAGYRVIPIPDFV 208 Query: 344 SELLNVLAQS------PNSDVNKEGWVFRSNSKSGKIIEPRSAHNR---ALVLAELPHIS 394 L L + + N +F + G I+PR+ + L A LP+I Sbjct: 209 VAELKELYEEHQRIKLSQPNFNSLNLMFVTTQ--GTPIDPRNFERKFKQLLKKANLPNIR 266 Query: 395 LHGLRRSFGTLAEWVEVPTGIVAQIMGHK 423 LH LR + TL V IV +I+GH+ Sbjct: 267 LHDLRHTVATLLLQQNVHPKIVQEILGHR 295 >UniRef50_A3UTJ0 Site-specific recombinase XerD-like n=1 Tax=Vibrio splendidus 12B01 RepID=A3UTJ0_VIBSP Length = 411 Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 11/155 (7%) Query: 292 IASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERI-IPLTPYVSELLNVL 350 + ++ +L LTG R E+ + +W D+ +M + D G + +PLTP++ EL L Sbjct: 240 VTGNFIALLFLTGCRDSELRTRKWKDISLIDKTMFVPDTKNGSSMTVPLTPFMVELFREL 299 Query: 351 AQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAEL--PH-ISLHGLRRSFGT--L 405 N +VF + I +PR+A R A + PH + H R SF T + Sbjct: 300 L---NMRQKGNPYVFFGRKERSHISQPRNAFARIKERAGIKNPHEVCFHVARHSFATNLI 356 Query: 406 AEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLL 440 V+V T V ++M HK + +K+ + LL Sbjct: 357 ENGVDVLT--VQRLMNHKDLSSTQKYVKHSQQKLL 389 >UniRef50_C0GWH6 Integrase family protein n=3 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GWH6_9DELT Length = 394 Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 80/384 (20%), Positives = 157/384 (40%), Gaps = 70/384 (18%) Query: 53 WDADVTTLACRATSGAKAFVFQSVYA--GKTLRMTIGNINDWKIDDARAEARRLQTLIDT 110 +D+DV S K+ +Q G+ + I ++ +++AR +A+++++ Sbjct: 26 FDSDVPGFIMEVRSTGKSTYYQRYRDKFGRLKQARIAPVDSITLEEARQKAKQIRSQTTM 85 Query: 111 GIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADH 170 G DPR +AE + TF D +YI + Sbjct: 86 GFDPRD------------EAEKNRNTPTFKEFIRD-------------------QYIP-Y 113 Query: 171 INLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRL 230 I + R + + PL N+ +SE+T D + + S Sbjct: 114 IQVHKRSWDQDSK-MLELRVLPLWG--NMKMSEITRDDVQQFQSN--------------F 156 Query: 231 LRAFIKWSNYQKKYQGIIP--GDLAQDYNVRKMVP---VSASKADDC----LQKEQLKSW 281 LRA K + Y ++ +LA+ ++V + P +S + ++C L E+ K Sbjct: 157 LRAGCKPGTVNR-YMALVKYIFNLAEKWDVIEKTPARHISRLEDNNCKERYLSSEETKRL 215 Query: 282 FSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFK---WSSMRIKDKIEGERIIP 338 +++ + + +++L+LTGAR+ E+ +L W ++D K W+ ++K + + IP Sbjct: 216 LGELKNCKSQVVPDIIELLILTGARKSEVVNLPWQELDLKQGLWTIPPERNKAKTRKTIP 275 Query: 339 LTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGL 398 L+ L +L + + N +VF + G I + +R A +P + +H L Sbjct: 276 LS---QGALRILEKRKH---NGSEYVFPNPKTGGPIKHFHNTWDRVRKNAGIPDVRIHDL 329 Query: 399 RRSFGTLAEWVEVPTGIVAQIMGH 422 R +F +L V +++GH Sbjct: 330 RHNFASLLVNSGRSLYEVQKLLGH 353 >UniRef50_Q1VBR2 Site-specific recombinase XerD-like protein n=1 Tax=Vibrio alginolyticus 12G01 RepID=Q1VBR2_VIBAL Length = 396 Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 15/173 (8%) Query: 260 KMVPVSASKADDCLQKEQLKSWFSAVRSLN-NPIASAYLQVLLLTGARREEIASLRWSDV 318 K+ P + ++ + L +++K F +R + PI S ++ +L + G R + + RW ++ Sbjct: 200 KLFPETGAR-ERWLSPQEIKRIFEELRKPDYCPIRSRFIILLFMLGCRERSLRAARWPNI 258 Query: 319 DFKWSSMRI--KDKIEG-ERIIPLTPYVSELLNVLAQSPNSDVNKEG--WVFRSNSKSGK 373 D + MRI +D G + I LTP + L + + K+G +VF + Sbjct: 259 DLENGVMRIPREDSKNGFQHQIQLTPQAIQEFRFLLR-----LKKKGNPYVFPGQKEKSH 313 Query: 374 IIEPRSAHN---RALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHK 423 I +PR N + L+L E I H R S+ + V G++ Q++GHK Sbjct: 314 ISQPRHLFNKIKKELMLKEPEQIVFHTARHSYASSLISAGVDVGVLKQLLGHK 366 >UniRef50_A4U5E9 Phage-related integrase, n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U5E9_9PROT Length = 190 Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 8/129 (6%) Query: 297 LQVLLLTGARREEIASLRWSDVDFKWSSMRI---KDKIEGERIIPLTPYVSELLNVLAQS 353 +++L LTG R EI L W +DF + + K +G + +PL ++ L VL + Sbjct: 30 IRLLCLTGCRLNEILCLEWRAIDFLNRRLMLDQHKTDKKGTKAVPLN---TDALEVLTKL 86 Query: 354 PNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPT 413 P D N +V G +I + R AEL ++ +H LR SF + A VP Sbjct: 87 PRIDGNP--FVIPGRDGIGHLINLQKPWKRLCKAAELENMRIHDLRHSFASTAASAGVPL 144 Query: 414 GIVAQIMGH 422 ++ I+GH Sbjct: 145 QVLGGILGH 153 >UniRef50_C6QLH5 Integrase family protein n=2 Tax=Geobacillus RepID=C6QLH5_9BACI Length = 199 Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 46/182 (25%), Positives = 82/182 (45%), Gaps = 30/182 (16%) Query: 299 VLLLTGARREEIASLRWSDVDFKWSSMRIKDKI---EGE---------------RIIPLT 340 V ++TG RR E+ L+W D+DFK ++ I + +GE R+IP+ Sbjct: 19 VGVVTGIRRGELLGLKWEDIDFKNKTITINGTLYRRKGEGLKYKPKTKTDSSDNRVIPIP 78 Query: 341 PYVSELL-------NVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNR---ALVLAEL 390 + E+L + + + N E +VF ++ GK I+P + + + Sbjct: 79 DAIVEVLRKEKALQDKTREKLGNSYNSENFVFINDK--GKPIDPDYLTRKFRETVKTLNV 136 Query: 391 PHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETW 450 I+LHGLR + TL + V IV+ I+GH + +Y +++R+ ++E Sbjct: 137 KQINLHGLRHTAATLLMKLGVHVKIVSDILGHSRVQVTLDYYSHSNEEMMRQSTNELEQH 196 Query: 451 IL 452 I Sbjct: 197 IF 198 >UniRef50_A4SIA1 Phage integrase family protein n=2 Tax=Gammaproteobacteria RepID=A4SIA1_AERS4 Length = 408 Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 79/357 (22%), Positives = 134/357 (37%), Gaps = 53/357 (14%) Query: 54 DADVTTLACRATSGA--KAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTG 111 D ++ L C G K F+ + ++ G+ + IG D ++ AR A + L+ G Sbjct: 34 DTQISGLKCLVGKGEGNKKFLMRYLWHGRKRAIAIGRFPDVDLNTAREIATEYKRLLSQG 93 Query: 112 IDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHI 171 IDP+ L+ + R+ + + YL PY A H Sbjct: 94 IDPK-----------QLKEDKRQELTLYELFQLHYL-------------PY-----AKHH 124 Query: 172 NLSSRGGESKKRGQ-GPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRL 230 S + E + R P L S +NL + A S Q +P L Sbjct: 125 KRSWQNDEQRFRDHLQPPMGSRLLSEINLEQGQ------ALQTSLMSQCKPATNNRITTL 178 Query: 231 LRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNN 290 L+A + WS + G L Q V ++ L K +++ F A + N Sbjct: 179 LKAILTWS--------VRMGYLEQHPLVYLKTLPENNQRTRFLDKAEIRRLFMAADADEN 230 Query: 291 PIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGE-RIIPLTPYVSELLNV 349 A Y+++LLLTG R++E+ +W +D ++ I G+ RI+ + + V Sbjct: 231 RYAGQYVKLLLLTGLRKDELRLAKWEHIDKVHQTLFIPHTKNGKSRILHMNHMA---MQV 287 Query: 350 LAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELP-HISLHGLRRSFGTL 405 L +P + ++F + NR L A++ + +H R S L Sbjct: 288 LQDTP--VIAGNAYLFPGQKPGQPLNNVTKPFNRMLKRAQIEGQVCIHTCRHSVAAL 342 >UniRef50_B8IQS5 Integrase family protein n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IQS5_METNO Length = 425 Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 53/170 (31%), Positives = 81/170 (47%), Gaps = 24/170 (14%) Query: 270 DDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKD 329 D Q+ L + A+R L +A+A L+TGAR E++ L D D ++ I+ Sbjct: 242 DAAEQQRLLNTCDGALRDL---VATA-----LMTGARFGELSRLMVRDFDRANGTVFIER 293 Query: 330 KIEGE-RIIPLTPYVSELLNVLA--QSPNSDV----NKEGWVFRSNSKSGKIIEPRSAHN 382 G R +PLTP L L+ ++P + + N EGW + +S K Sbjct: 294 SKNGRARHVPLTPGGVALFERLSAGRAPKALLLIRENGEGWGPATYQRSFKT-------- 345 Query: 383 RALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHY 432 AL A+L I+LH LR S+ + P +VA+ +GH + +AEKHY Sbjct: 346 -ALDRAKLESITLHELRHSYASAMVRNGAPLIVVAEALGHSGTRMAEKHY 394 >UniRef50_B9EBJ7 Integrase n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9EBJ7_MACCJ Length = 374 Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 57/227 (25%), Positives = 102/227 (44%), Gaps = 35/227 (15%) Query: 246 GIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYL-QVLLLTG 304 G+I + + Y K V+ K L E +KS+ VR N YL ++++ TG Sbjct: 144 GLIKQNFTE-YVEMKYKEVNMPKEKKYLPLEDIKSFLEHVR--NRSTIQYYLFRLIIETG 200 Query: 305 ARREEIASLRWSDVDFKWSSMRI------KDKIEG------ERIIPLTPYVSELLNVLAQ 352 R E +L + D+D + +++ + K K+ G RI+ +T +++ +N L Q Sbjct: 201 LRVGEACALTYEDIDTENNTLNVTKSYDQKRKVLGPTKTGNNRIVHITQSLAKEINNLIQ 260 Query: 353 SPNS--------DVNKEGWVFRSNSKSGKIIEPRSAHNRAL-----VLAELPHISLHGLR 399 N+ NK ++F + G I + HN + + E H+S+H LR Sbjct: 261 IQNAFKVVNEKVYNNKHNFIFVD--ELGNPIPRSTIHNTMVHITERMYGEGNHLSIHELR 318 Query: 400 RSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEK 446 + +L +VP ++ +GHK + + E+ Y L K+HE+ Sbjct: 319 HTHASLLFQADVPLKAISSRLGHKDTNVTERVYTH----LTDKYHEQ 361 >UniRef50_B5K290 Phage integrase n=2 Tax=Octadecabacter antarcticus 238 RepID=B5K290_9RHOB Length = 426 Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 88/421 (20%), Positives = 167/421 (39%), Gaps = 89/421 (21%) Query: 36 ERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTIGNINDWKI 94 E+ R +PE + ++D ++ L+ R SG+++FV +AG+ RM IG +W Sbjct: 18 EKTVRDMIPEEDRDYQVFDTEIRGLSIRTLRSGSRSFVLDYRFAGRQRRMAIGRWPEWSA 77 Query: 95 DDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGI 154 AR AR L+ ID G DP + + L+ R ++D + Sbjct: 78 TAARERARELRREIDEGRDP-------LGDRSELREAPR---------FKDMID------ 115 Query: 155 SAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLL---------NLPLSELT 205 RY+A+H+ + P +AG ++L N ++++T Sbjct: 116 ----------RYLAEHVPHLA-----------PLNAGDQRAMLTKLVAPHWANKLVADIT 154 Query: 206 PDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDY---NVRKMV 262 P +A L+ Q R + K +N +K QG P + + +RKM Sbjct: 155 PHDVATLLNIIAQGRARPSKE---------KPNNRARKLQGAKPTPIRANRVGEVLRKMF 205 Query: 263 PVSAS---KADD---------------CLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTG 304 ++ S + D+ L +E++ + + + + A+ +++ +LTG Sbjct: 206 TLAISWGWRTDNPATGFKKRVETARERFLSQEEIGRLAAVLDAAEDQRAAGIIRICMLTG 265 Query: 305 ARREEIASLRWSDVDFK---WSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKE 361 +R E+ R+ + + WS K +R I P +++ ++ Q S Sbjct: 266 SRVGEVRQARFEQFNLELCIWSKPAATTK---QRKIHRIPISADVAAIVRQRSVSVPRDN 322 Query: 362 GWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMG 421 W+F + + E R A LP + +H LR +F +L ++ +++G Sbjct: 323 PWLFPGDVPGQPVKEIRRFWINVQREANLPDVRIHDLRHTFASLLVSGGASLEMIGRLLG 382 Query: 422 H 422 H Sbjct: 383 H 383 >UniRef50_B0T7J1 Integrase family protein n=4 Tax=Alphaproteobacteria RepID=B0T7J1_CAUSK Length = 515 Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 80/333 (24%), Positives = 142/333 (42%), Gaps = 60/333 (18%) Query: 69 KAFVFQSVY--AGKTLRMTI--GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAE 124 K+F QS + GK + T+ G+ D +AR +A+ + I G + + Sbjct: 43 KSFTVQSEHWSNGKRVCKTVLVGHAGDMTTREARTQAKLILAQIANG---ELQNSQSKGA 99 Query: 125 AESLQAESRKTK-VTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKR 183 A + S T VT AW YL + K + P + + ADHI Sbjct: 100 AGTTTPASLPTHGVTLRQAWARYLT---AHLERKERSPATIKGYADHIERV--------- 147 Query: 184 GQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNR------PTVTAHAYRLLRAFIKW 237 L+ L+LPL L + + + ER +R P+ A R LRA + Sbjct: 148 ---------LSDWLDLPLQVLGENPV---MVAERHDRMSKDNGPSAANGAMRTLRAI--Y 193 Query: 238 SNYQKKYQGIIPGD--LAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASA 295 ++ +K ++ + P + LA D+N + + + + E L +WF+ R + +PI Sbjct: 194 NHARKSHRELPPENPTLAVDWNRER-------RRNTAMGVEDLPTWFAQARLMRHPIRRE 246 Query: 296 YLQVLLLTGARREEIASLRWSDVDFKWSSMRI-KDKIEGERI--IPLT-PYVSELLNVLA 351 + + LL+G+R + R +++K + I + K +R IPL+ P + L+ + Sbjct: 247 FHLLTLLSGSRPGALLQARVEHINWKDRILHIPRPKGGADRAFDIPLSRPMIRCLIRAMR 306 Query: 352 QS----PNSDVNKEGWVFRSNSKSGKIIEPRSA 380 S P+ + WVF +S+ G ++E + A Sbjct: 307 ASRILFPD---QAQEWVFAGDSQDGHMVEHKEA 336 >UniRef50_C8PEA9 Ferredoxin, 4Fe-4S n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PEA9_9PROT Length = 291 Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 8/148 (5%) Query: 290 NPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNV 349 N SA + LL G R+ E+ SL WSDV+ K + I +I + + EL Sbjct: 124 NEADSADIFFFLLHGRRKNEVLSLCWSDVNLKTKTYVIPFQINKAKRDMVYSMSDELYKR 183 Query: 350 L-----AQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGT 404 L A N+ +N G+VF + + K ++ R + N L LP I LH +R GT Sbjct: 184 LLKRYIAAKQNNQLN--GYVFVNPATGSKFVDLRRSWNSLLKRNNLPKIRLHDIRHLIGT 241 Query: 405 LA-EWVEVPTGIVAQIMGHKPSALAEKH 431 ++++P V+ +GH +K+ Sbjct: 242 YCINYLKLPIEQVSFTLGHTNIITTQKY 269 >UniRef50_C6BZG2 Integrase family protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZG2_DESAD Length = 381 Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 6/174 (3%) Query: 262 VPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFK 321 +P ++ + L +QLK + + + L++ + TG RR EI L D DF+ Sbjct: 189 MPRRDNEVVEYLTSDQLKRFLKVLEEWPSRDVCRMLKIAMFTGMRRGEIFKLEDRDCDFQ 248 Query: 322 WSSMRIKDKIEGERI-IPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSA 380 S + ++ G+ + IP+ V++LL Q N + +VF K G + SA Sbjct: 249 QSLIFLRAPKGGKSVSIPMNGVVTDLLLDQIQWKNETFPESEFVF--PGKKGAMRVNCSA 306 Query: 381 HNRALVLAELPHIS--LHGLRRSFG-TLAEWVEVPTGIVAQIMGHKPSALAEKH 431 NR A LP HGLR F TLA E ++ +++ HK S++ +++ Sbjct: 307 ANRIKKKAILPREFRIFHGLRHHFAVTLANSGEFSLDMIGELLTHKDSSMTKRY 360 >UniRef50_Q64NC0 Tyrosine type site-specific recombinase n=5 Tax=Bacteroides RepID=Q64NC0_BACFR Length = 452 Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 63/266 (23%), Positives = 110/266 (41%), Gaps = 47/266 (17%) Query: 201 LSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRK 260 + EL YI W +QN HA L +K Y + I P A+ ++R Sbjct: 179 IPELLDSYIV-WRKEIKQNSDATINHA---LTPILKACAYASEMSMIDPAVNARIQDMRI 234 Query: 261 MVPVSASKAD-----DCLQKEQLKSWFSAVRSLNNPIASAYLQVLLL----TGARREEIA 311 + VS S+ + L KEQ+ + ++ P +L++ G R ++ Sbjct: 235 VTKVSLSEEEVEFDGKSLAKEQVSALLEYYKTCQEPRRKEFLEMFFFAFHACGLRVVDVM 294 Query: 312 SLRWSDVDFKWSSMR-IKDKIEGERIIPLTP-----------------YVSELLNVLAQS 353 +L+W +DF +R I K +IPLT YV +L+ Sbjct: 295 TLQWKHIDFARKELRKIMIKTNKRHVIPLTEPALRILQQWQEKRAGCRYVFDLVK----- 349 Query: 354 PNSDVNKEGWVFRSNSKSGKIIEPRSAHNRAL-VLAE---LPH-ISLHGLRRSFGTLAEW 408 D++ ++++ + + K I N++L V+ E LP +S+H R SF A Sbjct: 350 ETLDLDDAEALYKARNNATKCI------NQSLAVVGEQIGLPFSLSMHAARHSFAVFALN 403 Query: 409 VEVPTGIVAQIMGHKPSALAEKHYRR 434 + +V++++GH + + EK Y R Sbjct: 404 KGLSMSVVSRLLGHGSTDVTEKVYAR 429 >UniRef50_UPI0000383FB1 COG0582: Integrase n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000383FB1 Length = 450 Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 98/409 (23%), Positives = 170/409 (41%), Gaps = 65/409 (15%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTI 86 + + K T L R P Q DA + RA SGAK F K R+T+ Sbjct: 1 MPKMKLTVAALDRMA-PPAAGQVDYNDATTSGFGVRANYSGAKTFFALLRIGSKLTRITL 59 Query: 87 G----NINDWK-----IDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKV 137 G + D K +++AR +A+ + G DPRI AE E+ A+ Sbjct: 60 GWYPADAVDEKMRRDALEEARTKAKDAMAIASVGKDPRIV----WAEREAANAQ------ 109 Query: 138 TFSVAWEDYLQELRTGISAKTKRPYSTR-YIADHINLSSRGG--ESKKRGQGPTSAGP-L 193 +QE + ++AK P + ++A H+ ++GG +S R G + Sbjct: 110 ---------MQEAQRAVNAKLLFPAVVKDFMAKHVG-QAKGGLRDSTARAYKAALQGTDV 159 Query: 194 ASLLNLPLSELTP-DYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDL 252 A+ + ++E++ D + + + A R F +W + Q +P L Sbjct: 160 AAWTDKMVTEISKRDVLDVLDAITARGALAKAASQRRYFSKFFRWCAERDLIQ--VPPTL 217 Query: 253 AQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIAS 312 V K P +A D L E+L+ ++A ++ +P +++L+LTG R +E+A Sbjct: 218 ----TVPK--PQAAVTKDRVLSVEELRDVWAAADAVGHPFGP-MVKLLILTGQREKEVAE 270 Query: 313 LRWS---DVDFK---WSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFR 366 WS D+D + W+ + K + +IPL + +L L + + W+ Sbjct: 271 AVWSEFADLDGEGPLWTLPGERTKNRRDNLIPLAKTATTILGGLPK-----YRRCPWILT 325 Query: 367 SN--------SKSGKIIEPRSAHNRALVLAE-LPHISLHGLRRSFGTLA 406 + SK+ K I+ A RA + +P + H +RR+F T+A Sbjct: 326 TTTKAPISGFSKAKKRIDTAIAARRAKDERKPMPGWTFHDIRRTFVTMA 374 >UniRef50_C9M7U3 Integrase/recombinase XerD n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M7U3_9BACT Length = 319 Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 46/153 (30%), Positives = 69/153 (45%), Gaps = 9/153 (5%) Query: 297 LQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPY-VSELLNVLAQSPN 355 L++ G R E+ SL+WSD+D + + K ER++P + S L AQ P Sbjct: 161 LELAYSAGLRVAELVSLKWSDLDETERWITVMGKGSKERMVPYGQWAASALAEWKAQCPP 220 Query: 356 SDVNKEGWVFRSNSKSGKIIEPRSAH---NRALVLAELPHISLHGLRRSFGTLAEWVEVP 412 S+ +GWVF K GK + R+ H A LA P S H LR F T Sbjct: 221 SE---KGWVF--PGKGGKSLTERTVHRLVEAASQLAGTPGASPHTLRHCFATHMLEGGAS 275 Query: 413 TGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHE 445 V +++GH+ +++ R P L R + + Sbjct: 276 VKAVQELLGHESLLTTQRYLRISPERLRRSYDD 308 >UniRef50_C7M6X5 Integrase family protein n=2 Tax=Capnocytophaga RepID=C7M6X5_CAPOD Length = 307 Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 49/178 (27%), Positives = 87/178 (48%), Gaps = 11/178 (6%) Query: 276 EQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGER 335 E++ S+FS+ S + A ++ L TG RR E++ L+ SDVDF+ +++ K + ER Sbjct: 121 EKVLSFFSSKDSFDEVRNRAVIETLYATGIRRSELSGLKVSDVDFEQKQIKVLGKGDKER 180 Query: 336 IIPLTPYVS----ELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELP 391 IP+ P + E L + + N ++ ++ K + R ++ V+ Sbjct: 181 YIPIIPELENTLKEYLVLREEVKNEKSQDYLFLVKNGKKIYSTLVYRIINSYFSVVTTKK 240 Query: 392 HISLHGLRRSFGT--LAEWVEVPTGIVAQIMGHKPSALAEKH-YRRRPLDLLRKWHEK 446 +S H LR SF + L ++ T V +++GH S+LA Y L L+K ++K Sbjct: 241 DVSPHVLRHSFASHLLDNGADLYT--VKELLGH--SSLASTQVYTNTSLAELKKQYKK 294 >UniRef50_C7IFL0 Integrase family protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IFL0_9CLOT Length = 297 Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 62/229 (27%), Positives = 104/229 (45%), Gaps = 30/229 (13%) Query: 220 RPTVTAHAYRLLRAFIKWSNYQKKYQ------------GIIPGDLAQDY-NVRKMVPVSA 266 +PTV A LLR + + KKY+ ++Q+Y + M P++A Sbjct: 45 KPTVDAITTPLLRKYTTFLKIDKKYEVETIRRKINSLRSFFSFLISQEYIDKNPMAPITA 104 Query: 267 SKADD----CLQKEQLKSWFSAV--RSLNNPIAS-AYLQVLLLTGARREEIASLRWSDVD 319 K D L+ +++K S S +N + ++ L+ TG RR E+ SL W ++D Sbjct: 105 PKKPDRLPIYLKPDEIKLLISMPMKHSRDNKLRDKCIIETLVFTGLRRSELLSLNWQNID 164 Query: 320 FKWSSMRIKD-KIEGERIIPLT-PYVSELLNVL-AQSPNSDVNKEGWVFRSNSKSGKIIE 376 F +++ + + K + +R++P+T P +S+L L + P D VF S + + Sbjct: 165 FGSNTITVLNGKGKKQRVVPITEPLISDLWAYLQTRLPLHD----NAVFISGNGTRLSTT 220 Query: 377 P-RSAHNRALVLAELP--HISLHGLRRSFGTLAEWVEVPTGIVAQIMGH 422 P R L LA L ++H LR S+GTL + +MGH Sbjct: 221 PLNQLFRRYLKLAGLTGKGYTIHKLRHSYGTLLLQNGADLISIQSLMGH 269 >UniRef50_C6JH03 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C6JH03_9FIRM Length = 312 Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 42/136 (30%), Positives = 66/136 (48%), Gaps = 13/136 (9%) Query: 295 AYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPL-TPYVSELLNVLAQS 353 A +++L TG R E+ SL S +DF + I K ERI+ + V E+L+ + Sbjct: 146 AVIELLFATGVRVSELCSLTLSQIDFTTYKIIINGKGSKERILQIGNEDVKEILSEYYAA 205 Query: 354 PNSDVNKEGWVF------RSNSKSGKIIEPRSAHNRALVLAELP-HISLHGLRRSFGTLA 406 +D++K GW F R + +S RS + L LA + HI+ H R SF TL Sbjct: 206 FKTDISKTGWFFINRLHKRYSEESV-----RSMIVKYLKLAAIDMHITPHMFRHSFATLL 260 Query: 407 EWVEVPTGIVAQIMGH 422 +V + +++GH Sbjct: 261 LESDVDIRYIQRMLGH 276 >UniRef50_C7LSP4 Integrase family protein n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LSP4_DESBD Length = 392 Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 51/188 (27%), Positives = 89/188 (47%), Gaps = 31/188 (16%) Query: 190 AGPLASLLN--LP-LSELTPDYIAAWLSTER-----------QNRPTVTA----HAYRLL 231 A P AS N LP L E TP I L ER + R T++A H LL Sbjct: 110 AKPDASYANRLLPELGEKTPSEIVT-LDLERLRRNLAKTKSPRTRKTLSAQTQKHVLALL 168 Query: 232 RAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNP 291 + ++W+ G + +++ +P ++ + + ++QL ++ A+ +N Sbjct: 169 KRMLRWAADM--------GHIDPPVHLKFRMPTVDNEKTEFMTEDQLSAYLKALDEESNQ 220 Query: 292 IASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKD---KIEGERIIPLTPYVSELLN 348 +A+ ++ LLTG RR + ++ WSDVD + + ++ K E + IPL+P E+L Sbjct: 221 HCAAFFRIALLTGIRRTALLNVMWSDVDLENGFLTLRGATAKNEKTQTIPLSPGAVEVLK 280 Query: 349 VLAQSPNS 356 + + PNS Sbjct: 281 GIVR-PNS 287 >UniRef50_C6HW36 Putative phage integrase n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HW36_9BACT Length = 367 Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 60/238 (25%), Positives = 107/238 (44%), Gaps = 24/238 (10%) Query: 202 SELTPDYIAAWLSTERQNR---PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNV 258 ++LTP + L+ R +R P H + LRA + + G I Q ++ Sbjct: 106 NDLTPSDLRKILNEARDSRDLSPQTINHFFGHLRAALN----EALRDGKIDHSPMQGFS- 160 Query: 259 RKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDV 318 ++P + + E+L+ +R + P ++ +LTG RREE SL WSD+ Sbjct: 161 --LLPTPRGRLRFLTEGEELR-----LREVMTPADFRLVRFAILTGLRREEQFSLTWSDI 213 Query: 319 DFKWSSMRI-KDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEP 377 D + + I + K G R +PL+ E+L + ++ V+ W F S + + I+P Sbjct: 214 DLQNRVLTIPRSKHGGTRHVPLSDEAVEILKAI-RTERRVVS--AWCFPSQNPATH-IDP 269 Query: 378 RSAHNR----ALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKH 431 ++ + R AL A + + H LR + + V V +I+GHK A+ ++ Sbjct: 270 QNFYRRVYLPALEKAGIKDVIWHTLRHTCASRLVMAGVDIRTVQEILGHKTLAMTTRY 327 >UniRef50_A1B6Q9 Phage integrase family protein n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1B6Q9_PARDP Length = 393 Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 5/134 (3%) Query: 289 NNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLN 348 P A+ +++LLLTG R EI +L+W VD++ +R+ D G +++P+ + Sbjct: 219 EEPEAANCIRLLLLTGCRLSEIQTLKWRYVDYRNGLLRLPDSKTGAKLVPIG---KAAIK 275 Query: 349 VLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEW 408 VL P D N +V + + + + R A L + +H LR SF + A Sbjct: 276 VLKTIPKIDGNP--YVITGRMEGQHLTDMQKPWRRLRKRAGLDDLRIHDLRHSFASDALQ 333 Query: 409 VEVPTGIVAQIMGH 422 + ++ +++GH Sbjct: 334 LGQDLTMIGRLLGH 347 >UniRef50_A0LL76 Phage integrase family protein n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LL76_SYNFM Length = 381 Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 85/185 (45%), Gaps = 12/185 (6%) Query: 261 MVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDF 320 M V K +D L ++L A+ N + +++ L TG RR EI LRW+D+D Sbjct: 179 MPRVRNEKTED-LTPDELARLLKALSEEPNTQVAHIVKLALFTGMRRGEILKLRWTDIDL 237 Query: 321 KWSSMRIKDKIEG-ERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRS 379 + I+D G ++ IPL+ +LA P +D +VF + + + + Sbjct: 238 DRGFISIRDPKGGVDQRIPLSESAR---RILANHPKTD---SLFVFPGRNGAQR-TDINK 290 Query: 380 AHNRALVLAELPHI--SLHGLRRSFG-TLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRP 436 + NR AELP LHGLR +F +LA EV + +++ HK + ++ R Sbjct: 291 SLNRIKEAAELPKDFRMLHGLRHAFASSLASSGEVDMYTLQKLLTHKSPTMTARYAHLRD 350 Query: 437 LDLLR 441 L R Sbjct: 351 ESLRR 355 >UniRef50_B5IBE9 Site-specific recombinase, phage integrase family protein n=1 Tax=Aciduliprofundum boonei T469 RepID=B5IBE9_9EURY Length = 310 Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 43/176 (24%), Positives = 86/176 (48%), Gaps = 16/176 (9%) Query: 295 AYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSP 354 Y+ L+ TGAR+ EI +L+W D+ + + + +K K + R + L P + +LL ++ Sbjct: 135 VYIWALVFTGARKSEIQNLKWDDILWDKNQIIVKGKFKKVRTVYLDPRLKKLLEKYKKTH 194 Query: 355 NSDVNKEGWVFRSNS-------KSGKIIEPRSAHNRALVLAE-------LPHISLHGLRR 400 + +N + ++ + K KI+EP N L+ + + H ++ R Sbjct: 195 EAFMNYRLSLGQNITDRLFFLIKRDKIVEP--GENSFLIAIKKRAEKRGIKHFNIKKFRS 252 Query: 401 SFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWILNEAG 456 ++ + + PT VA+ +GH + + K+Y +D+L + H+K+E + E G Sbjct: 253 TYVKIMHDSKTPTEWVARQLGHSSTRITRKYYHDFDVDILEEAHKKVEFFKKIEEG 308 >UniRef50_B5J7V0 Site-specific recombinase, phage integrase family protein n=2 Tax=Octadecabacter antarcticus RepID=B5J7V0_9RHOB Length = 448 Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 62/274 (22%), Positives = 107/274 (39%), Gaps = 48/274 (17%) Query: 49 QTFLWDADVTTLACRATSGAKA-FVFQSVY--AGKTLRMTIGNINDWKIDDARAEARRLQ 105 +TF+WD + ++ +A +V ++ G+ R IG+++ +DDAR++AR + Sbjct: 42 RTFIWDTALVGFGIEVSAKGRASYVCEARIKGTGRKFRQKIGSVDLIPLDDARSDARSML 101 Query: 106 TLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTR 165 GIDPR K E + T A DY+ R +++ T R Y Sbjct: 102 LQAFKGIDPRFEKQ-----------EVEQGPKTVGQAVTDYIDAKRHKLASSTVRDYRV- 149 Query: 166 YIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTE-RQNRPTVT 224 T + L+ +LPL +L +A S Q+ T Sbjct: 150 ----------------------TFSSCLSDWEHLPLGQLNGQMVATRYSKLLGQHSVAYT 187 Query: 225 AHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSA 284 R LRA + Y G+ P + + RK + + + L ++ + Sbjct: 188 NKVMRNLRAALN-------YHGLEPNPVK--FLTRKDLMAVDAPRNRFLSAHEIYIIYGY 238 Query: 285 VRSLNNPIASAYLQVLLLTGARREEIASLRWSDV 318 + +PI+ L +LTG R+ E L W++V Sbjct: 239 FSTFQHPISRVVL-FCILTGVRKNEALKLTWANV 271 >UniRef50_C7JF17 Phage DNA recombinase n=8 Tax=Acetobacter pasteurianus RepID=C7JF17_ACEP3 Length = 443 Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 71/294 (24%), Positives = 112/294 (38%), Gaps = 31/294 (10%) Query: 32 KFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAGKTLRMTIGNIN 90 K T + T P K+ D +V A R TS G+K F+F G++ R+ +G Sbjct: 2 KLTKSGIDLLTCPPEKRDVMFSDDEVKGFAVRVTSKGSKVFLFNYSKNGRSKRVKLGAYG 61 Query: 91 DWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQEL 150 D + AR A L+ + G DP AE + QA++ V Q Sbjct: 62 DLTVAQARKLAETLRGRVIAGEDP--------AEDKKAQAQA--------VEAMLAAQAE 105 Query: 151 RTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSA-GPLASLLNLPLSELTPDYI 209 + A T R+ + + +S + R + P L++LL P L + Sbjct: 106 QAAADALTLGVLIDRWQENSLKDAS----ASYRKEAPQRLRSSLSALLARPAHALKVAEV 161 Query: 210 AAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKA 269 A L Q+ PT RA W+ + +G + R +V Sbjct: 162 QARLDEVAQDHPTNARRIKAYGRAMYGWAEKRNLVEG--------NPFARVIVEGREVSR 213 Query: 270 DDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWS 323 D L +L ++ A + P + Q+L LT RR E+A +RW ++ WS Sbjct: 214 DRVLSDRELGEYWRAAALIPYPFGP-FFQLLALTLQRRTEVAGMRWDEIAPDWS 266 >UniRef50_Q88SM0 Prophage Lp4 protein 1, integrase n=1 Tax=Lactobacillus plantarum RepID=Q88SM0_LACPL Length = 388 Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 47/189 (24%), Positives = 81/189 (42%), Gaps = 29/189 (15%) Query: 271 DCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI-KD 329 D +K +L + NP A + ++L TG RR E +L+WSD++F+ + + + K Sbjct: 180 DFYEKSELLHFLDCASKHENPQAFMFFRLLAFTGLRRGEALALQWSDINFETNELTVNKT 239 Query: 330 KIEGE--RIIPLTPYVSELLNVLAQSPNSDVNKEGWV-----------FRSNSKS----- 371 + G+ R I TP + + P++ W F +N S Sbjct: 240 QAVGKRWRTIIQTPKTNTSYRTIVLDPDTAQWLHKWKMTQARQCFELGFNANDPSQLVFT 299 Query: 372 ---GKIIEPRSAHNRALVLAE---LPHISLHGLRRSFGTLAEWVEVPTGI--VAQIMGHK 423 K++ P + + + + L HI +H R +F TLA E GI V++ +GH Sbjct: 300 NQQNKLMSPSTVNYFNWSICKKYGLRHIKIHAFRHTFCTLA--FEAHAGINEVSKTLGHA 357 Query: 424 PSALAEKHY 432 + E+ Y Sbjct: 358 DLKITEQIY 366 >UniRef50_A1AN30 Phage integrase family protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AN30_PELPD Length = 367 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 8/151 (5%) Query: 301 LLTGARREEIASLRWSDVDFKWSSMRIKDKIEGE-RIIPLTPYVSELLNVLAQSPNSDVN 359 L TG RR EI SL W VD K +RI D GE R IP+ ++++ + + +S Sbjct: 210 LNTGCRRGEILSLTWDHVDLKHGFIRIADSKNGESRDIPINAALADMFKGVVRRIDSP-- 267 Query: 360 KEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQI 419 +VF + + + + + A A + + H LR +F + V V+++ Sbjct: 268 ---YVFTNPDTGTRYQDVKRSFATACRRAAIMNFHFHDLRHTFASHLVMNGVDLTTVSRL 324 Query: 420 MGHKPSALAEKHYRRRPLDLLRKWHEKIETW 450 +GHK + ++ P D L+K E++ TW Sbjct: 325 LGHKSLTMTLRYSHLAP-DHLKKAVERL-TW 353 >UniRef50_A1VGL4 Phage integrase family protein n=1 Tax=Desulfovibrio vulgaris DP4 RepID=A1VGL4_DESVV Length = 417 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 65/270 (24%), Positives = 115/270 (42%), Gaps = 34/270 (12%) Query: 201 LSELTPDYIAAWLSTERQ-------NRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLA 253 L + P+ I L Q +P + LLR I ++ +K I P + Sbjct: 152 LQNMKPEEITTTLVDNLQLSLANSGKKPGTIKNVIELLRRII---SFGEKKGLITPSQIC 208 Query: 254 QDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASL 313 + + P+ ++ + L EQL + +A+ S + A + + L TG RR EI +L Sbjct: 209 AHFEM----PILNNQKTEDLTPEQLNNLIAAIESTKHKKAGQMMLLALYTGMRRGEIFNL 264 Query: 314 RWSDVDFKWSSMRIKDKIEG--------ERIIPLTPYVSELLNVLAQSPNSDVNKEGWVF 365 +W +D+ + I + +G ER IPL +LL + + + +VF Sbjct: 265 KWEHIDWHRGFINIVGRDDGLGAKSGQCER-IPLNDLARQLLLSVPKGQSR------YVF 317 Query: 366 RSNSKSGKIIEPRSAHNRALVLAELPHI--SLHGLRRSFGT-LAEWVEVPTGIVAQIMGH 422 S G++++ R + A LP HGLR + + LA +V + ++M H Sbjct: 318 PGKS-GGRLVDIRKQADALKKEAGLPDSFRPFHGLRHVYASLLASTGKVSMYELQKLMTH 376 Query: 423 KPSALAEKHYRRRPLDLLRKWHEKIETWIL 452 K +A+ +++ R D L+K + IL Sbjct: 377 KSAAMTQRYAHLRD-DALKKASQTASEAIL 405 >UniRef50_Q1NSR7 Phage integrase n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NSR7_9DELT Length = 452 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 86/374 (22%), Positives = 143/374 (38%), Gaps = 53/374 (14%) Query: 50 TFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLID 109 T +WD+++ R T + F+ Q G+T+R +G + D I +A R Q +I Sbjct: 58 TMVWDSELRGFGVRLTPAGRTFIVQGRINGRTIRRALGRLEDGDITPQQA---REQAII- 113 Query: 110 TGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIAD 169 R+A+ K ++ + ++ +T EDY R S+ + + I Sbjct: 114 -----RLAEMRKGIDSGA-PGKATNGPLTLKEWAEDYKAHKRKKNSSLPLKDSTKADIDK 167 Query: 170 HINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYR 229 H+N G + N P+ E+ + + + T A+R Sbjct: 168 HVN------------------GIFKAWSNKPIGEIDREMVLTLYRNGCKRSSAQTCQAFR 209 Query: 230 LLRAFIKWSNYQKK-YQGI--IP----GDLAQDYNV----RKMVPVSASKADDCLQKEQL 278 + RA W+ + GI IP G L ++ +P+ A +EQ Sbjct: 210 VFRALYNWALAKSTGADGIATIPPNPVGALVNEWTTPAPRTNRLPMDKIGAAWLFLREQS 269 Query: 279 KSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKD-KIEGERII 337 +S A + +LLTG R E +L WS VD + R+ D K I+ Sbjct: 270 QSAAFAATRTAADMVC----FMLLTGCRIGEAKNLPWSQVDLDAKTWRLPDPKNRVPIIL 325 Query: 338 PLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHG 397 PL+ ++L Q VN +VF N + G I+ L IS H Sbjct: 326 PLSNLAHQILTHRRQ-----VNS--FVF--NGRQGGHIKDCRGLLENLAKHIGHQISPHD 376 Query: 398 LRRSFGTLAEWVEV 411 LRR+F +A+ ++ Sbjct: 377 LRRTFAAIAKECKI 390 >UniRef50_D2LKM4 Integrase family protein n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LKM4_RHOVA Length = 423 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 56/252 (22%), Positives = 105/252 (41%), Gaps = 32/252 (12%) Query: 66 SGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEA 125 SGAK+FV + + ++T+G+ +D + AR +AR+ L+ GIDP A+ K +A Sbjct: 36 SGAKSFVVRYRLGKRLGKVTLGSASDITLAAAREQARQTMALVRQGIDP--AEHRKTEKA 93 Query: 126 ESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQ 185 + AE + F + EDY+ R +S R + H+ + +G Sbjct: 94 ARIAAEEERKDSLFEIVAEDYI---RRHVSTLKGGHEVERLLRKHVIPAWKGRR------ 144 Query: 186 GPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQ 245 + ++ + ++T I Q H + +RA W+ + Sbjct: 145 -------IETITKRDILKVTDPII-------EQGHGRTANHVFAWMRALFSWA-----LE 185 Query: 246 GIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGA 305 +PG ++ K P S D L + +L+ ++L P ++++L+ T Sbjct: 186 RDLPGLEHSPFDKLK-APAPKSSRDRVLSEAELRLVLRGSQTLETPWRE-FVRLLVYTAT 243 Query: 306 RREEIASLRWSD 317 RR E+A W++ Sbjct: 244 RRNEVACAPWAE 255 >UniRef50_Q2JGT4 Phage integrase n=4 Tax=Frankia RepID=Q2JGT4_FRASC Length = 431 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 58/218 (26%), Positives = 94/218 (43%), Gaps = 32/218 (14%) Query: 257 NVRKMVPVSAS--KADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLR 314 NV K+ VS K L +Q A + ++ + + Y+ L L G RR EI LR Sbjct: 214 NVAKLAKVSGPTYKVHRGLSADQASHLLKA--AAHDRLYALYVLALYL-GLRRGEILGLR 270 Query: 315 WSDVDFKWSSMRIKDKIE---------------GERIIPLTPYVSELLNVL-----AQSP 354 W D+DF+ ++ ++ ++ ER +PL P ++++L A+ Sbjct: 271 WEDIDFEDETLAVRHSLQRVGGHLRVVAPKTRTSERTLPLLPLIAKVLREHQARQDAERE 330 Query: 355 NSDVN--KEGWVFRSNSKSGKIIEPRSAHNRALVLA---ELPHISLHGLRRSFGTLAEWV 409 +DVN + G+VF + G IEP + L L L + H +R + TL Sbjct: 331 TADVNWRETGFVF--TTAIGTPIEPDNLRRSWLPLCGVLGLEGVRFHDIRHTCVTLLLNA 388 Query: 410 EVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKI 447 VP +V +I GH + + Y LD R +K+ Sbjct: 389 GVPPHVVREIAGHSAIDVTMEIYAHASLDDKRAALQKL 426 >UniRef50_Q1R2C9 Integrase-like protein n=9 Tax=root RepID=Q1R2C9_ECOUT Length = 404 Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 109/425 (25%), Positives = 181/425 (42%), Gaps = 64/425 (15%) Query: 47 KKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQ 105 ++ L +D L+ R + G F ++ +AGK R+ IG + +AR E RL+ Sbjct: 15 ERDKVLVKSDRDGLSVRVSPKGRVVFQYRYQWAGKGERLDIGTYPATGLKEAREEVIRLR 74 Query: 106 TLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTR 165 +++ +PR+ K QAE RK +V E ++ K K+ Sbjct: 75 GELESNRNPRLVK----------QAEKRKATEAMTV--ESVIRAWYEAYCVKNKKGSEQI 122 Query: 166 YIADHINLSSRGGESKKRGQGPTSAGPLASLLNL--PLSELTPDYIAAWLSTERQNRPTV 223 + ++L S K G P A L L + PLS TP L +Q Sbjct: 123 LRSFELHLFS------KIGNIPHDAATLHDWLEVLEPLSTKTPAIADRLLINAKQ----- 171 Query: 224 TAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFS 283 AH + R I + + I G +D ++RK + L +++K ++ Sbjct: 172 -AHVWAYKRKLI-----ETRPLSDITG---KDMDIRK------GQKKRFLTHDEIKILYA 216 Query: 284 AVR-SLNNPIASAYLQVLLLTGARREEIASLRWSDVDF---KWSSMRIKDK---IEGERI 336 A+ S P A++++LL G R E+ + R D DF W+ + K I GE + Sbjct: 217 AIDGSRMVPKYRAFIKLLLHFGCRSSELITARVDDFDFINKVWTVPPERHKTGEITGEPL 276 Query: 337 I-PLTPYVSELLN-VLAQSPNSDV--NKEGW---VFRSNSKSGKIIEPRSAHNRALVLAE 389 P+ V EL+ ++ + SD+ KEG V R++ +S + A R + + Sbjct: 277 KRPIIEPVEELIKYAISMNNGSDMLFTKEGSREPVGRTSLQSLPYNLMQYAWRR--LGYQ 334 Query: 390 LPHISLHGLRRSFGTLAEWVEVPTGIVAQIM-GHKPSALAEKHYRRRPLDLLRK----WH 444 PH SLH LRR+ T + P +A+IM GHK + + + + L+ RK W Sbjct: 335 FPHWSLHDLRRTARTNFSDLTAPH--IAEIMLGHKLPGVWQVYDKSDYLEEQRKAYQAWW 392 Query: 445 EKIET 449 E++E+ Sbjct: 393 ERVES 397 >UniRef50_C2KW01 Possible tyrosine recombinase n=7 Tax=Clostridiales RepID=C2KW01_9FIRM Length = 358 Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 19/173 (10%) Query: 269 ADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIK 328 +D +KE+L + VR L A +Q++L TG R E L SDVDF+ +++RI Sbjct: 173 GEDLSKKEKLYHEKNQVRDL------AMMQLMLGTGIRVSECVGLNCSDVDFQNNAIRIH 226 Query: 329 DKIEGERIIPLTPYVSELLNVLAQSPNSDV---NKEGWVF------RSNSKSGKIIEPRS 379 K E I + V + L + S + E +F R + ++ +++ + Sbjct: 227 RKGGKEVSIYFSDEVEQGLRAYMEERKSKIPAAGHENALFLSLQNKRMSVRTVELMVKKY 286 Query: 380 AHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHY 432 A + L HI+ H LR S+GT +VA ++GH +KHY Sbjct: 287 AQK----VTPLKHITPHKLRSSYGTNLYQETGDIYLVADVLGHSDVNTTKKHY 335 >UniRef50_B5J7B6 Site-specific recombinase, phage integrase family protein n=3 Tax=Proteobacteria RepID=B5J7B6_9RHOB Length = 446 Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 52/216 (24%), Positives = 91/216 (42%), Gaps = 26/216 (12%) Query: 257 NVRKMVP----VSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIAS 312 N+ +M+P V+ + L + W++A+R + +A+ L+ L LT AR E+ Sbjct: 213 NLSEMLPKPQRVAKTVHHPALASSDVSVWYAALRGRDG-VAARALEFLALTAARSGEVRG 271 Query: 313 LRWSDVDFK---WSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNS 369 + W++VD W+ + K E +PL+ LL +A +P++D G S Sbjct: 272 MTWAEVDLTTGVWTVPADRMKASREHRVPLSAPAFSLLESMAVAPDADPTDCGRPVFSAP 331 Query: 370 KSGKIIE-PRSAHNRALVLAEL--------------PHISLHGLRRSFGTLAEWVEVPTG 414 + G + + SA R + AE+ P + HGLR +F P Sbjct: 332 RGGVLSDMSLSAVMRRMQQAEIDVGCAGWLDRASGRPAVP-HGLRSTFRDWTAECGYPRD 390 Query: 415 IVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETW 450 + + H + E+ YRR D+L + + W Sbjct: 391 MAEMALAHDVGSAVERAYRRS--DMLERRRAMMAAW 424 >UniRef50_Q5LU39 Site-specific recombinase, phage integrase family n=1 Tax=Ruegeria pomeroyi RepID=Q5LU39_SILPO Length = 375 Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 94/440 (21%), Positives = 171/440 (38%), Gaps = 79/440 (17%) Query: 30 RQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIGNI 89 R + T +++ L E + T+ WD R ++ +K+++ + K R T+G Sbjct: 2 RVRLTDLAVKKLPLSENGQVTY-WDELTPNFGIRCSTRSKSYIV--LLGEKRRRKTLGRY 58 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 D + DAR +A++L + A + E Q V F A +L++ Sbjct: 59 PDLSLADARKQAKQLLS------------ANAMGEG---QVTPHAPVVAFEEAKARFLKD 103 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 +T Y R + H N E ++ +G A+ Sbjct: 104 CEGRNKPRTVADYR-RLLNRHFNFKGDVREVYRQQVMRVVSGLSAT-------------- 148 Query: 210 AAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKA 269 P+ +HAY +R + W G++ D++V + S+ Sbjct: 149 -----------PSEQSHAYVAIRTMMNWC----VRHGLV------DHSVVPPMKQKTSER 187 Query: 270 DDCLQKEQLKSWFSAVRSLNNPIA-SAYLQVLLLTGARREEIASLRWS-----DVDFKWS 323 D L +++L+ + +R+ P A +Q+L+LTG RR EI +R S +V F Sbjct: 188 DRVLSEDELRKVY--LRAQETPFAFGPIVQLLILTGQRRTEIGQMRRSWISHGEVAFPKG 245 Query: 324 SMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNR 383 + K E PL+P + V+A PN+ +F + + K + H + Sbjct: 246 FAKNKR----EHRFPLSPLSQQ---VVADLPNTG----DLLFPAATDFEKAFTTWAWHKK 294 Query: 384 AL--VLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKP---SALAEKHYRRRPLD 438 L + +LH LRR+F T+ + P + +++ H S +A + R D Sbjct: 295 RFDEGLEAVEPYTLHDLRRTFATIHAKIGTPIHVTEKLLNHVSGTISGVAAVYNRHSYAD 354 Query: 439 LLRKWHEKIETWILNEAGIT 458 +R + +T+ L E +T Sbjct: 355 EMRHAASQFDTY-LTELALT 373 >UniRef50_B4WEQ1 Site-specific recombinase, phage integrase family protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WEQ1_9CAUL Length = 429 Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 57/224 (25%), Positives = 96/224 (42%), Gaps = 29/224 (12%) Query: 223 VTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVP-----VSASKADDCLQKEQ 277 + Y LRA W+ + + G P + RK+ P +S ++A D + Sbjct: 197 IADRTYSTLRATFNWAIDKGHFAGPNPCAKVE----RKLRPAVERFLSEAQAQDLIAALD 252 Query: 278 LKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSM-----RIK-DKI 331 + + A ++LLLTGARR EIA LRW++VDF + R K Sbjct: 253 ALEADATISERQG----AVYRLLLLTGARRNEIAGLRWTEVDFDRRRLVLPPSRTKAGGR 308 Query: 332 EGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSA--HNRALVLAE 389 G+R I L +L L ++ + +VF ++ S ++ L A+ Sbjct: 309 TGDRRISLNDMAYGILQRLYKT----RGRSQFVFPASKGDNGYATSESKIWRDKVLPKAK 364 Query: 390 LPHISLHGLRRSFGT--LAEWVEVPTGIVAQIMGHKPSALAEKH 431 L + +H LR SF + LA+ +P ++ + +GH S E++ Sbjct: 365 LEGVRIHDLRHSFASFALADGASLP--MIGKALGHANSRATERY 406 >UniRef50_C6VR10 Prophage Lp2 protein 2, integrase n=2 Tax=Lactobacillus plantarum RepID=C6VR10_LACPJ Length = 387 Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 25/153 (16%) Query: 301 LLTGARREEIASLRWSDVDFKWSSMRIK---DKIEGERI--------IPLTPYVSELLNV 349 L+TG R E+++L WSD+D+K ++RI D + G++ I ELLN Sbjct: 216 LMTGMRVAEVSALTWSDIDWKTKTIRINKSWDYVYGQKFKRTKTESSIRKISVTDELLNH 275 Query: 350 LAQ------SPNSDVNKEGWVFRSNSKSGKIIEPRSAH----NRALVLAELPHISLHGLR 399 L Q N D N + VF +N G+I P + N L E+ IS HGLR Sbjct: 276 LKQLRSLQIQKNLD-NPDHMVFLNN--RGRIPTPGACDLLLKNYHTTL-EIKRISFHGLR 331 Query: 400 RSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHY 432 + + + V +++ +GHK S++ Y Sbjct: 332 HTHASSLLYCGVKMEYISKRLGHKNSSITRNVY 364 >UniRef50_C7TI65 Phage-related integrase n=1 Tax=Lactobacillus rhamnosus Lc 705 RepID=C7TI65_LACRL Length = 382 Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 58/219 (26%), Positives = 95/219 (43%), Gaps = 39/219 (17%) Query: 264 VSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWS 323 V + K+ +Q+ + + + N+P +++ TG RREE+ +L SDV+FK S Sbjct: 166 VGSGKSPVYWDNKQVARFLTCIDPNNDPEKYTMFLLMVSTGIRREELCALNVSDVNFKTS 225 Query: 324 SMRI----------KDKIEGE------RIIPLTPYVSELLN----VLAQSPNSDVNKEGW 363 ++ I K+ I+G R IPLTP V+ L +L S + + Sbjct: 226 TLSINKAYATGLNGKESIKGTKSTAGMRTIPLTPKVTIQLKKWIALLDASKIISIRDDRP 285 Query: 364 VFRSNSKSGKIIEPRSAHNRA------LVLAE--LPHISLHGLRRSFGTLAEWVEVPTGI 415 +F S + E R NR ++ A P I+LHGLR+SF T V Sbjct: 286 LF----PSPQHFEKRLGINRPNKWLKDIIEANHLSPRITLHGLRKSFVTNMIRSGVDVST 341 Query: 416 VAQIMGHKPSALAEKHY-------RRRPLDLLRKWHEKI 447 V ++ GH + + Y R +D L ++ E++ Sbjct: 342 VQRLAGHSTPDVTLRIYAGMNQSDAREGIDKLAEYMERV 380 >UniRef50_A5EBE3 Putative phage related integrase n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EBE3_BRASB Length = 434 Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 18/163 (11%) Query: 294 SAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQS 353 +A L++L+LTGAR EI L+W VDF+ + + D G + I +LNV A + Sbjct: 257 AAALRLLILTGARLREILHLKWDYVDFERGLLLLPDSKTGRKAI--------VLNVPALA 308 Query: 354 PNSDVNKEG-WVFRSNSKSGKIIEPRSAHNRA----LVLAELPHISLHGLRRSFGTLAEW 408 S ++++G +V S + +PR+ NR A+L + LH LR + ++ Sbjct: 309 VLSSLDRKGQYVIFSEQED----KPRADLNRPWRTISARAKLQGVRLHDLRHTHASVGAG 364 Query: 409 VEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWI 451 + I+ +++GH ++ ++ Y D L+K KI I Sbjct: 365 AGLGLPIIGKLLGHTQASTTQR-YAHLDSDPLQKASNKIAASI 406 >UniRef50_Q1QKD6 Phage integrase n=1 Tax=Nitrobacter hamburgensis X14 RepID=Q1QKD6_NITHX Length = 375 Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 99/415 (23%), Positives = 168/415 (40%), Gaps = 96/415 (23%) Query: 60 LACRATSGAKAFVFQSVYAG-----KTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDP 114 L C AT+ K F Q +T+R+ I + + +AR A+ + + I +G+DP Sbjct: 31 LVCHATT--KTFAVQGDVRRNGRHVRTVRVKIDRADRIGLREARNRAKAIMSQIQSGVDP 88 Query: 115 RIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPY------STRYIA 168 A +T +T + A E +L E +P+ S +Y Sbjct: 89 --------------TAGPEETGITVAQALETHLGE----------KPFREATVESYKYNV 124 Query: 169 DHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAY 228 DH R ++++L SE+ Y L T + TV Sbjct: 125 DHYLTRIRN----------------RAVVDLSRSEVRDIY--ERLRTLKGQ--TVAICVM 164 Query: 229 RLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKE----QLKSWFSA 284 R LRA I N + I G+ PV+A + ++E L +W+ A Sbjct: 165 RTLRAVI---NTAMRLDETITGN-----------PVAAIRLPTPKRREVDAIDLTAWWEA 210 Query: 285 VRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFK-----WSSMRIKDKIEGERIIPL 339 +L+ PI + +LTGARR + +R +DVDF+ + M+ D+ + P+ Sbjct: 211 TETLS-PIRRDLHRAFMLTGARRSSLLQVRRNDVDFERGVIVFKHMKTSDQ---AMMFPM 266 Query: 340 TPYVSELLNVLAQSPNSDVNKEGWVFRS-NSKSGKIIEPRSAHNRALVLAELPHISLHGL 398 Y+ ++L ++ ++ +N E W++ S S SGK+ EP+ +LP S H Sbjct: 267 GTYLKDMLKARLET-DAPLNSE-WLWPSPTSASGKVEEPKEPRR------DLP--SPHEY 316 Query: 399 RRSFGTLAEWVEVPTGIVAQIMGHK-PSALAEKHYRRRPLDLLRKWHEKIETWIL 452 R T+ VP A ++G K P A + ++ LR + +ET ++ Sbjct: 317 RHLARTMYIAAGVPYAESALLLGQKLPGASGGYVHAEHLVEHLRPHAQALETKVM 371 >UniRef50_A1K6M5 Site-specific recombinase, phage integrase family n=1 Tax=Azoarcus sp. BH72 RepID=A1K6M5_AZOSB Length = 358 Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 12/157 (7%) Query: 273 LQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIE 332 L ++ + +A R NP + + L TGAR+ EI +LRW VDF ++ ++ E Sbjct: 171 LSDQERAALLTACRESRNPYLYPAVVLALSTGARQAEITTLRWQQVDFARRTIVLR---E 227 Query: 333 GE------RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALV 386 GE R++PLT +LL LA+ + ++ VF S + + A + A+ Sbjct: 228 GETKNGAGRVLPLTGEALDLLRDLAKVRDI---RDDRVFPVASTTRAFNSIKGAWDGAVK 284 Query: 387 LAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHK 423 A + H LR + + + + VA+++GHK Sbjct: 285 RAGISDFRWHDLRHTAASYLTMAGIGSMEVAKVLGHK 321 >UniRef50_C2EA79 Bacteriophage integrase n=2 Tax=Lactobacillus RepID=C2EA79_9LACO Length = 372 Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 60/209 (28%), Positives = 94/209 (44%), Gaps = 33/209 (15%) Query: 271 DCLQKEQLKSWFSAVRSLNNPIASAYLQVL--LLTGARREEIASLRWSDVDFKWSSMRIK 328 D L ++ + + S +P ++Y + ++TG R +EIA+L W D++F W ++ I Sbjct: 167 DYLNVNEINKLAAYLESKLDPRYTSYYMIYTAIMTGMRLQEIAALTWDDINFNWKTIDIN 226 Query: 329 D------------KIEGE-RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKII 375 K E RII + S+LL+++AQ + N G VF + SG I Sbjct: 227 KAWDFVLKKYIPTKTESSTRIIRVN---SKLLDIIAQLKS---NHSGMVF--CNASGTI- 277 Query: 376 EPRSAH-NRAL--VLAEL----PHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALA 428 P SA N+ L L +L P H LR S L + V +++ +GH Sbjct: 278 -PTSAGCNKTLRKSLRQLGINKPSYHFHALRHSHVALLLYKGVDIYAISKRLGHSDLTTT 336 Query: 429 EKHYRRRPLDLLRKWHEKIETWILNEAGI 457 + Y +L +K + IE ILN GI Sbjct: 337 TRRYAYLIDELRQKADDDIEN-ILNNVGI 364 >UniRef50_C4XNE8 Site-specific recombinase n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XNE8_DESMR Length = 398 Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 7/169 (4%) Query: 293 ASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERI-IPLTPYVSELLNVLA 351 A+ L+V + +G RR E+ LR D+DF+ + I+D G+ + +P+ P L Sbjct: 216 AARMLEVAMFSGMRRGEVFKLRIRDLDFRAGLISIRDPKGGKTVSVPMNPITRAALEDQL 275 Query: 352 QSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELP--HISLHGLRRSFG-TLAEW 408 +VF + ++ SA +R A +P HGLR F TLA Sbjct: 276 AWKEEAFPDSSYVFPGKDGAQRVAC--SAASRIKQAAGIPARFRIFHGLRHHFAVTLANS 333 Query: 409 VEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWILNEAGI 457 E ++ +++ HK +A+ ++ + P D ++ +K + N AG+ Sbjct: 334 GEFTLDMIGELLTHKSTAMTRRYGQFLP-DAKKRASDKAAELLTNHAGL 381 >UniRef50_C4Z093 Integrase/recombinase XerC n=18 Tax=Bacteria RepID=C4Z093_EUBE2 Length = 354 Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 46/145 (31%), Positives = 63/145 (43%), Gaps = 9/145 (6%) Query: 295 AYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSE-LLNVLAQS 353 A L ++L TG R E L +DVDF +R+ K E + V E LLN L + Sbjct: 192 ALLTLMLGTGIRVSECVGLDINDVDFDNDRIRVIRKGGSESFVYFGDEVREALLNYLEER 251 Query: 354 PN--SDVNKEGWVFRSNSKSGKIIEPRSAH----NRALVLAELPHISLHGLRRSFGTLAE 407 N D E +F S K K + RS A + + HI+ H LR ++GT Sbjct: 252 KNLTPDEGHENALFISAKK--KRLCVRSVELLVKKYAQTVTTVKHITPHKLRSTYGTNLY 309 Query: 408 WVEVPTGIVAQIMGHKPSALAEKHY 432 +VA ++GHK KHY Sbjct: 310 QESQDIYLVADVLGHKDVNTTRKHY 334 >UniRef50_Q483M1 Site-specific recombinase, phage integrase family n=3 Tax=Gammaproteobacteria RepID=Q483M1_COLP3 Length = 390 Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 102/438 (23%), Positives = 175/438 (39%), Gaps = 78/438 (17%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAK-AFVFQSVYAGKTLRM 84 MALS K LR+ P + AD L+ R + A F ++ + GK R+ Sbjct: 1 MALSDTK-----LRKIKAPYNGEAEL---ADRDGLSVRVSPKALITFNYRFRWEGKQQRI 52 Query: 85 TIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWE 144 +G K+ DAR + + +D G+DPR+ +Q ESR + F E Sbjct: 53 KLGRYPGLKLIDARKKVNEYRHNLDEGLDPRV-----------VQNESRSHNL-FGDMCE 100 Query: 145 DYLQE-LRTGISAKTKRPYST---RYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLP 200 ++ + + T + KT+ Y + +Y+ + N+ ++ Sbjct: 101 AFMTKYVMTELRPKTQTLYKSTFNKYVTPYKNI------------------------DIE 136 Query: 201 LSELTPDYIA--AWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNV 258 + T D+IA W+ E + +A+A +L+ F +N+ K +G I D + Sbjct: 137 RYKYT-DWIAYFDWVKKE-----SSSANAGSVLKRFKAVANWAKA-RGQIKHSHLIDIPI 189 Query: 259 RKMVPVSASKADDCLQ-KEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSD 317 K + K + CL+ E + W S + P +Q+LLLTGAR EI R + Sbjct: 190 -KAIGSHQQKRERCLEWDEVIGLWRQIESSKSTPQCKTCIQLLLLTGARNAEIREARRDE 248 Query: 318 VDFK---WSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKI 374 D W + K + + PL+ V EL+N L D R +G I Sbjct: 249 FDLDKNIWLLPPERSKTKKQVRRPLSTGVIELINKLDLIYGQD--------REYLIAGDI 300 Query: 375 I-EPRSAH------NRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSAL 427 +P + H R + PH H RR+ T +V + +++GH+ + Sbjct: 301 KGKPLTTHAVNRFVQRMNNHLKYPHFVPHDFRRTIVTRLSEHKVELHVTEKMLGHELGGI 360 Query: 428 AEKHYRRRPLDLLRKWHE 445 ++ + +D R+ +E Sbjct: 361 LTRYNKHDWIDEQREAYE 378 >UniRef50_Q1GIK7 Phage integrase n=5 Tax=Rhodobacteraceae RepID=Q1GIK7_SILST Length = 334 Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 57/244 (23%), Positives = 98/244 (40%), Gaps = 28/244 (11%) Query: 230 LLRAFIKWSNYQKKYQGIIPGDL-----AQDYNVRKMV---------PVSASKADDCLQK 275 L R ++ + K QG I +L A + V++ + P + + L+K Sbjct: 101 LCRKYVTNRTAEGKSQGTIHTELGHLRSAMRFAVKERIIDKAPSIERPAKPTPKERYLEK 160 Query: 276 EQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWS--SMRIKDKI-- 331 E++ + A + + +A + +L T R + L W VDF+ ++R+ D Sbjct: 161 EEIAALIDAASAPHIALA---IHLLFATAGRIGAVLDLTWDRVDFQRGIINLRLDDSKTR 217 Query: 332 EGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELP 391 +G I+P+ + L + SD + GK+ R A AEL Sbjct: 218 KGRAIVPMNSGIRAALQTAHDAALSD-------YVVEYAGGKVKNIRKGFEAACRRAELD 270 Query: 392 HISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWI 451 ++LH +R S VP VAQ +GH A+ + Y R D L+ E ++ Sbjct: 271 GVTLHTIRHSSAVAMVSNGVPLEKVAQYLGHSNVAITYQTYARFAPDHLQDAAEILDFVQ 330 Query: 452 LNEA 455 + EA Sbjct: 331 IREA 334 >UniRef50_C0GET2 Integrase family protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GET2_9FIRM Length = 386 Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 48/211 (22%), Positives = 97/211 (45%), Gaps = 37/211 (17%) Query: 273 LQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKD--- 329 L ++ +K++ + + + + AY+ L L G R+ E+ L+W ++DF+ ++ IK+ Sbjct: 179 LTQDDVKAFIATAKE--DKFSVAYILSLAL-GMRKGEVLGLQWENIDFEQKTLTIKNNLT 235 Query: 330 KIEGERIIPLTPYVS----------ELLNVLA-----QSPNSDVNK--------EGW--- 363 +++G+ ++ TP + ++L +L+ Q+ ++ K EG+ Sbjct: 236 RVKGKGLVLTTPKTASSNRVVLLPEKILTLLSEHGRKQAVEREIAKASGKYSEAEGFDNM 295 Query: 364 VFRSNSKSGKIIEPR---SAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIM 420 VF + GK + PR + L A L LH LR S+GTL V + + Sbjct: 296 VF--TYEEGKPVCPRYFERKFKKVLEKAGLSQAGLHSLRHSYGTLQNEAGVNMKAIQATL 353 Query: 421 GHKPSALAEKHYRRRPLDLLRKWHEKIETWI 451 GH ++ Y + +L R+ + ++ W+ Sbjct: 354 GHSKASFTMSVYTQNTTELQREATQAVDKWL 384 >UniRef50_A8LND4 Putative uncharacterized protein n=1 Tax=Dinoroseobacter shibae DFL 12 RepID=A8LND4_DINSH Length = 366 Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%) Query: 286 RSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSM---RIKDKIEGERIIPLTPY 342 R N I + V+ LTG R E + SL W VD + ++ ++K+K+ R +P+ Sbjct: 193 RREKNVIVGTAVAVMFLTGIRSENVCSLSWDQVDLQNKTIHLTKMKNKL--ARTLPVMDT 250 Query: 343 VSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAH-----NRALVLAELPHISLHG 397 V +LL + S + WVF ++S +G I +P+ NR V LPH Sbjct: 251 VVDLLKAIRNSGSE------WVFPASSATGYITDPKGTFAEIDGNRVRVF--LPHDG--- 299 Query: 398 LRRSFGTLAEWVEVPTGIVAQIMGHK--------PSALAEKHYRRRPLDLLRK-WHEKIE 448 RR F A +P + + G K P ++ RR +D + K + E+I+ Sbjct: 300 -RRHFMQAAAEAFLPDYVAHFLRGDKKAGEGSDMPMKYLKRMGNRRAVDEIEKVYFERIK 358 >UniRef50_Q5X3B3 Putative uncharacterized protein n=2 Tax=Gammaproteobacteria RepID=Q5X3B3_LEGPA Length = 353 Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 42/141 (29%), Positives = 68/141 (48%), Gaps = 11/141 (7%) Query: 296 YLQVLLL--TGARREEIASLRWSDVDFKWSSMRIKDKIEGE-RIIPLTPYVSELLNVLAQ 352 YL V+L TG R+ EI L W +VDF S + + + GE R++PLT + +L+ A+ Sbjct: 197 YLAVVLALSTGGRKMEILGLSWKNVDFNRSIITLHETKNGERRVLPLTGHALDLMKQHAK 256 Query: 353 --SPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVE 410 NSD+ G F++ I+ R+ AL A + H LR S + Sbjct: 257 VRHVNSDLVFPGKDFKTP------IDLRTPFETALKRAGITDFRWHDLRHSCASYLAMNG 310 Query: 411 VPTGIVAQIMGHKPSALAEKH 431 +A+I+GHK + +++ Sbjct: 311 ASLAEIAEILGHKTLQMVKRY 331 >UniRef50_A4TWM2 Phage integrase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TWM2_9PROT Length = 387 Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 86/388 (22%), Positives = 147/388 (37%), Gaps = 56/388 (14%) Query: 43 LPEGKKQTFLWDADVTTLACRA--TSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAE 100 LP G+++ + D +VT T G + + AG++ + IG D ++ AR + Sbjct: 16 LPHGQRKLRITDTEVTGFVMEVWPTGGITFWCKYTDPAGRSREVKIGKAADISVEQARRK 75 Query: 101 ARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKR 160 A+ L+ + DP K + + TF ++ E + R Sbjct: 76 AKELRAQVALSGDPAGDK------------DKHRAVPTFKA----FVTEQYLPFAKDRLR 119 Query: 161 PYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNR 220 YS + + L G + L + + EL LS NR Sbjct: 120 SYSDQESMCRLRLIPTWGAKR-----------LDEIRTTDIVELQRRLRDENLSPSTVNR 168 Query: 221 PTVTAHAYRLLRAFIKWSNYQKK--YQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQL 278 A A R+ ++W Y+ + Q + + A+++ + L +++ Sbjct: 169 --HVALAKRVFNLALRWQAYEGRNPCQHV---EFAREHQRERF-----------LTPDEM 212 Query: 279 KSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFK---WSSMRIKDKIEGER 335 + F A+ + A+ + +L LTGAR+ E + R+ D+D W+ + K R Sbjct: 213 RRLFQALDDEPSRSAANCIALLALTGARKSEALNARFDDIDLPNRVWTVPASRSKSGKVR 272 Query: 336 IIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISL 395 IPL+ +LL L P+ W+F + + G I R NR A LP + Sbjct: 273 RIPLSEAAVKLLVGLPPEPDCP-----WLFPNAASDGPIENIRRCWNRLKAAATLPSDTR 327 Query: 396 -HGLRRSFGTLAEWVEVPTGIVAQIMGH 422 H LR SF +L V I+GH Sbjct: 328 PHDLRHSFASLLVGSGQSLYSVQTILGH 355 >UniRef50_C9RBE5 Integrase family protein n=1 Tax=Ammonifex degensii KC4 RepID=C9RBE5_AMMDK Length = 414 Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 66/263 (25%), Positives = 108/263 (41%), Gaps = 43/263 (16%) Query: 193 LASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGII---P 249 L SL ++PL +TP + A ++ ++A RL+ + Q G++ P Sbjct: 133 LPSLGSVPLRSVTPASLQALYNSLSAR--GLSARTVRLVHVVLNACLKQAVKNGLLVRNP 190 Query: 250 GDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREE 309 + + +++ VPV L +E+++++ A R A A + L TG RR E Sbjct: 191 AEATEPPKLKRRVPVRP------LAREEVEAFLKAARGERLYPAFA---LALKTGLRRGE 241 Query: 310 IASLRWSDVDFKWSSMRI-------KDKIEGE--------------RIIPLTPYVSELLN 348 + L+W DVD + +R+ KD G+ R +PLT V LL Sbjct: 242 VLGLKWEDVDLERGVLRVRRSLVEAKDPETGKVRLVFQEPKTEKSRRTVPLTRDVVALLK 301 Query: 349 VLAQSPNSDVNKEGWVFRSN-----SKSGKIIEPRS---AHNRALVLAELPHISLHGLRR 400 N + G + N ++ GK I PR+ A + L A L H LR Sbjct: 302 SHKARQNEEKLYFGEAYEDNGLVFCTELGKPIWPRNFLRAFHSVLKKAGLERHRFHALRH 361 Query: 401 SFGTLAEWVEVPTGIVAQIMGHK 423 +F TL V +++GH+ Sbjct: 362 TFATLLLASGEELKNVQELLGHE 384 >UniRef50_Q1MNY2 Integrase n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=Q1MNY2_LAWIP Length = 383 Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 52/221 (23%), Positives = 103/221 (46%), Gaps = 28/221 (12%) Query: 221 PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKS 280 P H LL+ I + ++ I P +L D +P ++ + L K QLK+ Sbjct: 157 PASIKHILVLLKRLINFG--IQRNLCIKPQNLYID------MPKVDNQKTEILSKNQLKN 208 Query: 281 WFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLT 340 A+ + N A++++ L+TG R+ + +L+WSD DF+ + + + + Sbjct: 209 LLLALDAEPNQSDVAFIRLALVTGMRKSALLALKWSDCDFENNIITLSGNYAKKGKTDYI 268 Query: 341 PYVSELLNVLAQSP--NSDVNKEGWVFRSNSKSGKIIEPRSAHNRALV-----LAELPHI 393 P + ++L P NSD ++F + + + R+ +N+ L+ A+LP Sbjct: 269 PMNNSAKSILLSIPKGNSD-----FIFATRNGT-----KRTTYNQRLIKRIKEKAKLPKD 318 Query: 394 --SLHGLRRSFGT-LAEWVEVPTGIVAQIMGHKPSALAEKH 431 LHGLR +F + LA +V + +++ H+ A+ +++ Sbjct: 319 FRPLHGLRHNFASRLASSGKVDLYTIQRLLTHETPAMTQRY 359 >UniRef50_A7ICY0 Integrase family protein n=14 Tax=Alphaproteobacteria RepID=A7ICY0_XANP2 Length = 452 Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 5/149 (3%) Query: 283 SAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPY 342 +A ++ N ++ ++ + LTG RR E+ +LRW + D S +R+KD EG I P+ Sbjct: 242 TASKNENYRMSVEIIRQIALTGCRRMEMVTLRWDEADTDCSCLRLKDSKEGSSIRPIGLP 301 Query: 343 VSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSF 402 V E L D +VF + + + L IS H LR SF Sbjct: 302 VVEYLERRRNEAIGD-----YVFPGRGGENAFGSFPNHWGKIFANSPLADISPHVLRHSF 356 Query: 403 GTLAEWVEVPTGIVAQIMGHKPSALAEKH 431 ++A + +A ++GH ++ + Sbjct: 357 ASVANDLGFTEVTIAALVGHAKGSVTSNY 385 Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 55/129 (42%), Gaps = 14/129 (10%) Query: 46 GKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRL 104 G K +WD ++ R TSG +++V Q AG++ R TIG W + AR EA+ Sbjct: 15 GAKDYVIWDDELPGFGLRVFTSGKRSYVLQYRSAGRSRRFTIGLHGVWTPERARQEAKAQ 74 Query: 105 QTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTG-ISAKTKRPYS 163 I G DP AE L + +T + YL +L+ G I K RP Sbjct: 75 LGRIAQGDDP--------AEERLLD----RKALTVKELCDLYLADLQAGLILGKGGRPKK 122 Query: 164 TRYIADHIN 172 IA + Sbjct: 123 PGTIASDLG 131 >UniRef50_A0LQG0 Phage integrase family protein n=2 Tax=Deltaproteobacteria RepID=A0LQG0_SYNFM Length = 415 Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 44/163 (26%), Positives = 81/163 (49%), Gaps = 11/163 (6%) Query: 273 LQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIE 332 L ++L A+ N IA+ +++ L TG RR E+ L+WSD+DF+ + I+ Sbjct: 220 LTPDELAKLMDAIEKDENLIAANLMKMALFTGMRRGELFRLKWSDLDFERGFIHIRGPKG 279 Query: 333 G-ERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELP 391 G ++ IP+ ++L ++ NS G+VF +I +S N+ A LP Sbjct: 280 GVDQTIPVNEEARKILQSHRRT-NS-----GFVFPGRGGHQRIDIHKSV-NKIKEAAGLP 332 Query: 392 HI--SLHGLRRSFGT-LAEWVEVPTGIVAQIMGHKPSALAEKH 431 +LHGLR ++ + LA +V + +++ HK + +++ Sbjct: 333 KGFRALHGLRHAYASMLASSGKVDLYTLQRLLTHKSPTMTQRY 375 >UniRef50_B7H3T9 Phage integrase family protein n=9 Tax=Acinetobacter RepID=B7H3T9_ACIB3 Length = 410 Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 83/366 (22%), Positives = 139/366 (37%), Gaps = 59/366 (16%) Query: 54 DADVTTLACRATSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEAR-RLQTLIDTGI 112 D+++ A R + K ++ + GK++R +G+ ++DAR A+ +L+ L D+ Sbjct: 25 DSEIIGFAIRVNNSYKTYIVEKKVKGKSIRCKLGDYEKITVEDARILAQQKLKELTDS-- 82 Query: 113 DPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHIN 172 +P K KI L+ ++ K +PY +IN Sbjct: 83 NPLSIKNNKI---------------------------LKNSLNEKIDQPYLKEAFQVYIN 115 Query: 173 LSSRGGESKKRGQG---PTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYR 229 E K+R L L L L ++T I + Q + R Sbjct: 116 ----HHELKERTLADYREVIEKYLIDLSELKLIDITEQRIEERYTQLSQYSYAKANLSMR 171 Query: 230 LLRAFIKWS--NYQKKYQGII-----PGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWF 282 +LRA ++S YQ K +I P +L + + + +P + D + L W Sbjct: 172 VLRAVYRFSIKYYQNKNCEVIIPRINPVNLLKKKQLWEEIPPRRNYID----VDNLTKWV 227 Query: 283 SAV-----RSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERII 337 A+ R N +L L+LTG R E SL W ++D + ++ + + Sbjct: 228 QAIIEYKGRGQENETNKDFLLTLILTGLFRNECESLHWKNIDLEEGTLSFLNPYNN---V 284 Query: 338 PLTPYVSELLNVLAQSPNSDVNKEGWVFRS-NSKSGKIIEPRSAHNRALVLAELPHISLH 396 Y+ L L + NK WVF S S+SG II + +L + Sbjct: 285 YYKIYMGNFLWHLMKKRRIQ-NKGEWVFPSVKSESGHIINISKFRKKINEQCKLS-FTFQ 342 Query: 397 GLRRSF 402 LRR+F Sbjct: 343 DLRRTF 348 >UniRef50_Q2NBN0 Site-specific recombinase, phage integrase family protein n=3 Tax=Erythrobacter RepID=Q2NBN0_ERYLH Length = 398 Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 78/393 (19%), Positives = 149/393 (37%), Gaps = 66/393 (16%) Query: 43 LPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEA 101 +P+GK +T W R SG ++ Q+ AG+ +TIG + A+ A Sbjct: 26 VPKGKARTTTWLGVEHGFGIRHYPSGRNVYIVQTRMAGRMRTVTIGPTSVLTRYQAQMVA 85 Query: 102 RRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRP 161 RR+ G DP + +I A S + ++ W+ E TG Sbjct: 86 RRVIAYAQVGRDPATERQ-RIRSAPSFADFVTEYWDRWAPRWKASTLETHTG-------- 136 Query: 162 YSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLST-ERQNR 220 Y RY+ D + + + + EL ++ +W + Sbjct: 137 YRRRYLDD-------------------------AFVGVYIDELNEGHVTSWFADLNNLTG 171 Query: 221 PTVTAHAYRLLRAFI-KWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLK 279 P + + +L+ + K ++ + + P R + P + + L ++L Sbjct: 172 PGASNRTFEILKHMLNKAEDWGYRLENTNP--------CRSVRPNRKRQCERFLTNDELA 223 Query: 280 SWFSAVRSL------NNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEG 333 + + +L + A + +LLLTG R+ EI +L W+D+ K + + ++D G Sbjct: 224 RLGAELTNLRASEDRTKQCSGAAITLLLLTGCRKSEILTLEWTDI--KGNRLHLRDSKTG 281 Query: 334 ERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHN----RALVLAE 389 R + L E++ L + + W +R +P N R A Sbjct: 282 PRTVWLGSAAREVIAALPRFER--IPYPFWNYRYR-------KPLRCVNGFWRRLRDEAG 332 Query: 390 LPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGH 422 LP + +H LR +F + A + ++ +++GH Sbjct: 333 LPDVRIHDLRHTFASHAAMNKETLPMIGRLLGH 365 >UniRef50_A7HHG2 Phage integrase family protein n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HHG2_ANADF Length = 365 Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 44/148 (29%), Positives = 68/148 (45%), Gaps = 16/148 (10%) Query: 291 PIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI---KDKIEGERIIPLTPYVSELL 347 P + ++ TG R+ E+ LRW VD +R+ + K R++ LT E+L Sbjct: 191 PTFAPVIEFDYETGLRKTELRFLRWEQVDLGLGCIRLSAKETKTNEARVVYLTSRALEIL 250 Query: 348 NVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHN----RALVLAELPHISLHGLRRSFG 403 + +S +VF N +G+ P S HN RA A I H LRRSF Sbjct: 251 RATPRQLHSP-----YVF-VNPDTGR---PWSEHNKMLRRACERAGYAGIWFHDLRRSFV 301 Query: 404 TLAEWVEVPTGIVAQIMGHKPSALAEKH 431 T A VP +V ++ GHK ++ +++ Sbjct: 302 TNARRSGVPESVVMKLSGHKTRSVFDRY 329 >UniRef50_B6R7S7 Phage integrase family protein, putative n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R7S7_9RHOB Length = 335 Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 9/139 (6%) Query: 297 LQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNS 356 L+ LL+TG R+EE +LRW +D + S+ K GE+ L V + L+ + + Sbjct: 181 LRYLLMTGRRKEEALNLRWDYLDLELGSVSQPTKT-GEKTFRLAQEVVDHLDSVPRVKGC 239 Query: 357 DVNKEGWVFRSNSKSGKIIEPRS---AHNRALVLAELPHISLHGLRRSFGTLAEWVEVPT 413 D +VF S K + + H+ A++ + +H LR++ G+ V Sbjct: 240 D-----YVFASFGKGNTAVNEHTLYGVHSDVCKRADISDLQVHDLRQTEGSHLRLSGVDL 294 Query: 414 GIVAQIMGHKPSALAEKHY 432 +A I+GH +HY Sbjct: 295 ADIADILGHADLTTTRRHY 313 >UniRef50_C9A167 Integrase n=1 Tax=Enterococcus gallinarum EG2 RepID=C9A167_ENTGA Length = 377 Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 29/180 (16%) Query: 264 VSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWS 323 V K + K++LK + +A+ + NN A Y ++L TG R+ E +L+WSD+D + Sbjct: 175 VREDKDMNFYDKDELKKFMAALENNNNFRAFVYFRLLAFTGMRKGESLALKWSDIDLEKQ 234 Query: 324 SMRIKDKIE----GERI-IPLTP-----------YVSELLNVLAQSPNSDVNKEGWVFRS 367 ++ I + G I P TP VS L +SP +G VF+ Sbjct: 235 TLYINKAVSRSATGLYIQTPKTPSSIRRISIDDKTVSILQEYKKESP------DGLVFQ- 287 Query: 368 NSKSGKIIEPRSAHNRALV-LAELP----HISLHGLRRSFGTLAEWVEVPTGIVAQIMGH 422 S+ G I+ P L + LP IS+HG R + +L V +GH Sbjct: 288 -SEDGGILSPAKPRKWYLTAMKNLPDDFKQISIHGFRHTHASLLFEAGASIKDVQSRLGH 346 >UniRef50_B8FGB9 Integrase family protein n=2 Tax=Desulfobacteraceae RepID=B8FGB9_DESAA Length = 373 Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 7/152 (4%) Query: 296 YLQVLLLTGA----RREEIASLRWSDVDFKWSSMRIK---DKIEGERIIPLTPYVSELLN 348 YLQ + G R +EIA L W+ VD + R++ K + R++ L P + E+ Sbjct: 179 YLQGFVTFGYKYGWRFQEIAGLTWAQVDRDRWTARLEVGTTKNKAGRMVFLDPELIEIFK 238 Query: 349 VLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEW 408 + + +N +VF + +GKI+E R A AL A + + H LRR+ Sbjct: 239 TQWKQRSKHINILPYVFPNRRHTGKIVEIRFAWKNALKEAGVSYKLFHDLRRTAVRNMVR 298 Query: 409 VEVPTGIVAQIMGHKPSALAEKHYRRRPLDLL 440 VP + ++ GHK A+ +++ DLL Sbjct: 299 AGVPENVAMRVSGHKTRAVFDRYNIVDERDLL 330 >UniRef50_B5KC37 Putative phage-related integrase n=1 Tax=Octadecabacter antarcticus 238 RepID=B5KC37_9RHOB Length = 385 Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 80/374 (21%), Positives = 145/374 (38%), Gaps = 56/374 (14%) Query: 52 LWDADVTTLACR-ATSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDT 110 L+DA V L R ATSG K++ + G+ LR T G D + +AR +A Sbjct: 26 LFDASVRGLGLRVATSGTKSWFMMRRFNGRMLRTTFGRYPDLTLANARLKA--------- 76 Query: 111 GIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADH 170 P + + ++ L RKT + F V +++L++ + AK K + R Sbjct: 77 ---PNVLADM----SDGLTQGQRKTDL-FKVVLDEWLKKDQ----AKNKSVHQVRVAMYK 124 Query: 171 INLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRL 230 L + G P P+AS+ ++ L + A P Sbjct: 125 HALPAFG---------PM---PVASITKRDVNRLIDKIVDA-------GSPVAANRVLAF 165 Query: 231 LRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADD-CLQKEQLKSWFSAVRSLN 289 + F W + D+ + + P S K D L E++K +++A + Sbjct: 166 TKRFFSWCKER---------DILELSPAEAIRPPSKEKTRDRVLTLEEIKGFWAACDQMG 216 Query: 290 NPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNV 349 P + Q+LLLTGAR E++ W +V ++ + + + +N+ Sbjct: 217 YPWGPIF-QLLLLTGARLREVSQASWGEVSIADGTLNLPARRTKNGRAHQIQLSDQAINI 275 Query: 350 LAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLA-EW 408 + P V + +F +N + + R +++ + H LRRSF T + E Sbjct: 276 IQALPK--VEGQDLIFTTNGTTA-VSGFSKVKKRLDIISGVADWRFHDLRRSFATHSTER 332 Query: 409 VEVPTGIVAQIMGH 422 + + + +I+ H Sbjct: 333 LGISPVVADKILNH 346 >UniRef50_D2L4K8 Integrase family protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L4K8_9DELT Length = 395 Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 22/218 (10%) Query: 221 PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKM---VPVSASKADDCLQKEQ 277 P H L + +++ G+ G L + RK +P ++ + L ++ Sbjct: 153 PQTVKHVLALFKRLVRF--------GVKKG-LCDSPDPRKQTISMPRVDNETTEDLDADE 203 Query: 278 LKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGE-RI 336 L A+ N A+ ++++ + TG RR E+ L W DVDF+ + I+ G+ + Sbjct: 204 LARLVQAIEDEPNIQAANFMRLAMFTGMRRGELFKLEWRDVDFERGFIHIRHPKGGKSQK 263 Query: 337 IPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELP--HIS 394 IPL VLA P+ V +VF ++ + A NR A LP Sbjct: 264 IPLNDAARA---VLASHPH--VENSPYVFPGQGGKQRVTI-QVASNRIKARASLPADFRP 317 Query: 395 LHGLRRSFG-TLAEWVEVPTGIVAQIMGHKPSALAEKH 431 LHGLR F TLA +V + +++ HK + +++ Sbjct: 318 LHGLRHLFASTLASSGQVDLLTLQKLLTHKSPNMTKRY 355 >UniRef50_D2S8K7 Integrase family protein n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S8K7_9ACTO Length = 377 Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 68/263 (25%), Positives = 111/263 (42%), Gaps = 38/263 (14%) Query: 196 LLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGII---PGDL 252 L +LPL L P + A + +R R ++A + R + A ++ + G+I P L Sbjct: 106 LGSLPLDRLRPSNVEALVLAKR--RAGLSASSVRTIYAVLRAALDVAVRDGLIQRNPAAL 163 Query: 253 AQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIAS 312 + P K L +Q ++ AVR + + + Y +V+L TG RR E + Sbjct: 164 VKR-------PAVERKDAGYLSAQQAEALLEAVR--GDRLEALY-RVMLATGLRRGEALA 213 Query: 313 LRWSDVDF-------KWSSMRIKDKIE-GE-------RIIPLTPYVSELLNVLAQSPNSD 357 L W DVD +W+ R +E GE R +PL E L + ++ Sbjct: 214 LHWRDVDLDAAVVRVRWTLSRTSAGLELGEPKTEKSRRTVPLPVPAVETLRAHRKRQAAE 273 Query: 358 VNKEGWVFRSN-----SKSGKIIEPRSAHNRALVLAE---LPHISLHGLRRSFGTLAEWV 409 G +++++ S+ G +EPR+ R LAE L + LH LR S + Sbjct: 274 QLAAGSLWQASGLVFTSEIGTPLEPRNVLRRFEALAERAGLRGVHLHTLRHSAASFLLAA 333 Query: 410 EVPTGIVAQIMGHKPSALAEKHY 432 T +V + +GH A+ Y Sbjct: 334 GTHTKVVQEHLGHSSYAITADIY 356 >UniRef50_B0KFC6 Integrase family protein n=5 Tax=Pseudomonas putida RepID=B0KFC6_PSEPG Length = 436 Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 87/383 (22%), Positives = 158/383 (41%), Gaps = 49/383 (12%) Query: 79 GKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVT 138 GK IG D + +AR AR + + IDP AK KI EA+ L E+R T Sbjct: 75 GKENVYVIGRYPDVGLKEARELARAARNSVANHIDPLKAKKAKI-EAQWLN-EAR----T 128 Query: 139 FSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLN 198 F+ E++++ + +K+ + + +HI L ++ Sbjct: 129 FAYVAEEWMKFKSADLVSKSVAGFRG-ALQNHI---------------------LPAIGE 166 Query: 199 LPLSELTPDYIAAWLSTERQNRPTVTAHAYR-LLRAFIKWSNYQKKYQGIIPGDLAQDYN 257 P+SE+ ++I A ++ R R A R ++R+ + ++ + + + ++ Sbjct: 167 RPVSEIKLEHITAIITELRYKRIMAMARRVRTIIRSILGFAEGRGWVERNVALSNTEELK 226 Query: 258 VRKMV---PVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLR 314 +R +V P AD L + + LN + +++L+L R E+ +R Sbjct: 227 IRHVVTSNPAIERPAD-------LGKFLLRLDDLNLGSVAYAMRLLVLLPVRPGELVKMR 279 Query: 315 WSDVDF-----KWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNS 369 W DVD ++ + K + + I+PL LL L + D GWVF S Sbjct: 280 WEDVDLIGADWRYVVSKTKHLDKSKHIVPLPEQALVLLRELHKDRVVDDAGNGWVFGSPV 339 Query: 370 KSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLA-EWVEVPTGIVAQIMGHK-PSAL 427 G+ I+ S + I+ HG R ++ T+A E + + ++ + H+ P AL Sbjct: 340 YPGRSIDATSILKSLQKVWPEYAITAHGFRATYRTIAHEHLGIDPIVLELSLSHRMPGAL 399 Query: 428 AEKHYRRRPLDLLRKWHEKIETW 450 + R + LL + E + W Sbjct: 400 GAVYARAQ---LLSQRREAAQLW 419 >UniRef50_B9JF62 Tyrosine site-specific integrase/recombinase protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JF62_AGRRK Length = 431 Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 37/146 (25%), Positives = 66/146 (45%), Gaps = 3/146 (2%) Query: 286 RSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSE 345 R++ A A +++ L TG RR EI L WSDVD + + + D G++ + L+P Sbjct: 258 RTVYGEHAIAAIRLYLFTGCRRSEILRLTWSDVDLERGILFLPDSKTGKKPVILSPQAQA 317 Query: 346 LLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTL 405 +L L + + + + I P A R A L + LH LR ++ ++ Sbjct: 318 ILTNLTRVGKYVIAGADAGTKDEAPRADIDRPWKAVTRR---AGLHKLRLHDLRHTYASI 374 Query: 406 AEWVEVPTGIVAQIMGHKPSALAEKH 431 I+ +++GHK A +++ Sbjct: 375 GAGGGQGLPIIGKLLGHKNIATTQRY 400 >UniRef50_B8D1P6 Phage integrase family protein n=1 Tax=Halothermothrix orenii H 168 RepID=B8D1P6_HALOH Length = 391 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 59/221 (26%), Positives = 92/221 (41%), Gaps = 32/221 (14%) Query: 257 NVRKMVPVSASKADDCLQ---KEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASL 313 N+ K V V + + L K+Q+ + A R I YL L TG RR E+ L Sbjct: 165 NICKAVEVPKKQEEKKLHTWNKKQVNIFLKAARDYKYFILH-YLA--LNTGMRRGELLGL 221 Query: 314 RWSDVDFKWSSMRIKDKI---------------EGERIIPLTPYVSELL--NVLAQSP-- 354 +W D+D + + +K ++ G R IP+T V L + + Q Sbjct: 222 QWKDIDMEKKRIEVKRQLARTDEGLIFKKVKTKSGNRTIPITDNVVRELKRHQIKQGEKR 281 Query: 355 ---NSDVNKEGWVFRSNSKSGKIIEPRS-AHNRALVLAE--LPHISLHGLRRSFGTLAEW 408 NK+ + SN G I+PR+ + ++ E LP I H LR +F TL Sbjct: 282 LALGEAYNKKADLVASNG-IGNPIDPRNLVRDFKDIIEETGLPEIRYHDLRHTFATLFLE 340 Query: 409 VEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIET 449 + P + QI+GH + Y ++L + K+ET Sbjct: 341 AKGPIKTLQQILGHSSITVTIDTYSHVTEEMLIEAERKMET 381 >UniRef50_A2SD71 Putative uncharacterized protein n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SD71_METPP Length = 334 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 9/139 (6%) Query: 296 YLQVL--LLTGARREEIASLRWSDVDFKWSSMRIKDKIEGE-RIIPLTPYVSELLNVLAQ 352 YL V+ L TGARR E+ +LRW+DVD + + + G+ +++PL P V + L A Sbjct: 182 YLLVMMGLTTGARRGELEALRWADVDLERAEAAVHRSKNGDKKVLPLVPAVVDELAKHAG 241 Query: 353 SPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVP 412 + N+ VF S + A +RAL A + H LR S + Sbjct: 242 AANA------LVFPSTRRPDIAYNFDPAWDRALKAAGVKSFRFHDLRHSCASALAQNGAT 295 Query: 413 TGIVAQIMGHKPSALAEKH 431 +A+++GH+ ++ +++ Sbjct: 296 LLEIAEVLGHRQLSVTKRY 314 >UniRef50_B0PGN2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0PGN2_9FIRM Length = 526 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 32/214 (14%) Query: 262 VPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLL---TGARREEIASLRWSDV 318 +P + L +E+L+ R L A Y ++ LL TG RR E+ +L+W D+ Sbjct: 179 LPPKRGREMQVLGREELQ------RFLIQAQAEGYFELFLLDLCTGLRRGELLALQWDDL 232 Query: 319 DFKWSSMRIKDK---IEGE------------RIIPLTPYVSELLNVLAQSPNSDVNKEGW 363 DF+ ++ + + ++G R + L P V E+L ++ +S W Sbjct: 233 DFRTGALTVNKQVYEVKGRLQVSVPKTRASIRRLVLPPGVVEVLRAYRETVDSR-----W 287 Query: 364 VFRSNSKSGKIIEPRSAHNRALVLAE---LPHISLHGLRRSFGTLAEWVEVPTGIVAQIM 420 +F S K + P + R ++ E I H LR +F TL+ + ++ ++ Sbjct: 288 MFPSPVKEDVPMTPGAVRRRLQIILERAGCKRIRFHDLRHTFATLSLENGMDVKTLSAML 347 Query: 421 GHKPSALAEKHYRRRPLDLLRKWHEKIETWILNE 454 GH +A Y D+ + KI+ + NE Sbjct: 348 GHVSAATTLDIYTHVTGDMQSEAAAKIDRGLGNE 381 >UniRef50_A5F3U5 Site-specific recombinase, phage integrase family n=5 Tax=Vibrio RepID=A5F3U5_VIBC3 Length = 411 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 101/443 (22%), Positives = 178/443 (40%), Gaps = 79/443 (17%) Query: 38 LRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTIGNINDWKIDD 96 L+ FTL +G L R + G + F+ G + R+ +G+ D + Sbjct: 18 LKVFTLTDGD-----------GLGARVSLQGNVRWQFRYKINGASKRVDLGDYPDLSLLK 66 Query: 97 ARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISA 156 AR EA++ + + G DP++ ++V ++ E+ K V+ A E +L E Sbjct: 67 AREEAQKCREWLAEGHDPKLQRSV-------IRQETLKP-VSVQDALEYWLVE------- 111 Query: 157 KTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTE 216 Y+ S+R K R Q P L L +E T +I + Sbjct: 112 -----YAE---------SNRANADKHRSQFQKHIYPYIGALPLAQTE-THHWIECFDRVR 156 Query: 217 R----QNRPTVTAHAYRLLRA--FIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKAD 270 + + RP A Y L A +++ ++ + DL + +K K D Sbjct: 157 KGIAGKQRPAPVAAGYVLQNAKQALRFCRVRRYATSRVLDDLTVNDVGKKQ-----RKKD 211 Query: 271 DCLQKEQLKSWFSAVRSLNN--PIASAYLQVLLLTGARREEIASLRWSDVDFK---WSSM 325 L ++L ++AV++ N P ++ L++ GAR +E+ +W + DF+ W+ Sbjct: 212 RVLTAQELSDLWNAVQTPNKFLPYYCHLVKFLVVFGARTQEVRLSKWKEWDFEALIWTVP 271 Query: 326 RIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVF------RSNSKSGKIIEPRS 379 + K + E+II P EL+ L Q D +KE + + S+ G+ R Sbjct: 272 KEHSKTD-EKII--RPIPDELVPWLLQL-KEDSDKETLILGEEKSPETVSQQGRFFWQRL 327 Query: 380 AHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDL 439 H A +LH +RR+ T + V +V Q++GH + + R + L Sbjct: 328 GHEEAW--------TLHDIRRTLATRLNELGVAPYVVEQLLGHSLGGVMAIYNRSQYLPE 379 Query: 440 LRKWHEKIETWILNEAGITIKNN 462 R E + W+ + +T K N Sbjct: 380 KR---EALTMWLEHLDIMTNKTN 399 >UniRef50_C7H2F1 Prophage LambdaCh01, site-specific recombinase, phage integrase family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H2F1_9FIRM Length = 475 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 64/271 (23%), Positives = 109/271 (40%), Gaps = 51/271 (18%) Query: 188 TSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQ-G 246 ++A + ++ LPLS+ +++ R N TV H +R+L S + K Q G Sbjct: 182 STAEKVVRVVGLPLSKAFTEHVK---DGGRLNGNTVQ-HYHRMLS-----SVFTKAVQWG 232 Query: 247 IIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGAR 306 ++P + + R P + L+++ + A++ S Q+ L TGAR Sbjct: 233 LVPENPCK----RAEAPKAEEIDVQALEEKDVARLLEALQDAPAQF-SVITQLALFTGAR 287 Query: 307 REEIASLRWSDVDFKWSSMRIKDKIE----------------GERIIPLTPYVSELLNVL 350 R EI LRW DVD ++ I+ ++ R I + P +LL Sbjct: 288 RSEICGLRWCDVDLDAGTLSIERNVQYIPGKGTVFTTPKTKRSRRCIKIGPECVQLLREY 347 Query: 351 AQSPNSDVNKEG--WVFRSNSKSGKIIE--------------PRSAHN---RALVLAELP 391 Q ++ + G WV R +GK++E P++ L +LP Sbjct: 348 RQHQRAERLRMGTAWV-RRVEIAGKMVENDLLFTKWNGAPIDPKTVTTWFPGFLAAHDLP 406 Query: 392 HISLHGLRRSFGTLAEWVEVPTGIVAQIMGH 422 + H LR + +L VP V+ +GH Sbjct: 407 PVHFHSLRHTNASLLIAAHVPVTAVSGRLGH 437 >UniRef50_C9MZG6 Integrase n=1 Tax=Leptotrichia hofstadii F0254 RepID=C9MZG6_9FUSO Length = 326 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 80/185 (43%), Gaps = 29/185 (15%) Query: 275 KEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIE-- 332 +E++K + +++N A L L TG R EI +LRW +VD + I I+ Sbjct: 130 EERMKIFEYIKKNMNCRTAGILL--CLCTGLRIGEICALRWKEVDMARGIISINHTIQRI 187 Query: 333 -------GERII--PLT-------PYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIE 376 E II P T P EL+ VL + + D N +V S + K IE Sbjct: 188 YLSNAKKSEVIISEPKTQSSKRKIPIARELIPVLEKFKSEDGN---YVI---SGTEKYIE 241 Query: 377 PRSAHN---RALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYR 433 PR+ + L E+ + H LR +F T A + + V++I+GH ++ Y Sbjct: 242 PRTYRKFFKKMLGFLEIRKLRFHSLRHTFATQAIELGIDCKTVSEILGHSTVSITLNLYV 301 Query: 434 RRPLD 438 LD Sbjct: 302 HPDLD 306 >UniRef50_A5VH76 Phage integrase family protein n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VH76_SPHWW Length = 450 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 12/144 (8%) Query: 297 LQVLLLTGARREEIASLRWSDV---DFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQS 353 L+ +L R E + WS+V D W+ + K+ E IPL V E+L +A+ Sbjct: 253 LEFTILCATRTNETLRMTWSEVNLDDAVWNVAADRMKMGVEHRIPLPDRVVEILREIAKG 312 Query: 354 PNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVL--AELPHISLHGLRRSF-GTLAEWVE 410 N D +VF KI +P S + +VL +L H ++HG+R +F + E Sbjct: 313 TNCDPGT--FVFEGQ----KIGKPLSQMSMTMVLRRIKLGHYTVHGMRSAFRDYMGEMTN 366 Query: 411 VPTGIVAQIMGHKPSALAEKHYRR 434 P +V Q + H+ + YRR Sbjct: 367 HPESVVEQALAHQIGDETTRAYRR 390 >UniRef50_B3WDC1 Integrase n=3 Tax=root RepID=B3WDC1_LACCB Length = 394 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 44/185 (23%), Positives = 75/185 (40%), Gaps = 36/185 (19%) Query: 275 KEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIK------ 328 K+Q+ S+ A P+ ++ L+ G R E +LRWSD+DF +++ + Sbjct: 181 KDQVGSFIEAAEEDKEPMWLSFFVTLIDCGLRVGEAMALRWSDIDFSKNTLSVNATRIYR 240 Query: 329 ---------------DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVF-------- 365 + +R +T V++LL + S N +G+ F Sbjct: 241 AETGSNAGKIALDRPKTLSSKRTEYMTARVNDLLQQQYERHFSHGNVQGFRFSTSHNNDF 300 Query: 366 ----RSNSKSGKIIEPRS---AHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQ 418 S++K G+ + R+ A NR A LPHI +H LR + L + + Sbjct: 301 VFTYSSDAKFGQPLRSRATTGAFNRITNRAGLPHIRIHDLRHTHAVLMREAGLSLDDIKD 360 Query: 419 IMGHK 423 +GHK Sbjct: 361 DLGHK 365 >UniRef50_C6XMJ6 Integrase family protein n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XMJ6_HIRBI Length = 318 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 66/235 (28%), Positives = 104/235 (44%), Gaps = 25/235 (10%) Query: 201 LSELTPDYIAAWLSTERQN---RPTVTAHAYRLLRAFIKWSNYQ-KKYQGIIPGDLAQDY 256 L LTP + AWL+ R N + T + A +RAF K+ + Q K I A Sbjct: 68 LVNLTPSDVRAWLAFRRANDDLQATSISRALSAVRAFFKYLDRQLDKPNARIQMVKAPKR 127 Query: 257 NVRKMVPVSASKADDCL---QKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASL 313 R PVS A + L + + ++ W +A + A + ++ G R E SL Sbjct: 128 PQRLPRPVSQEIAKNLLKEVENQDVEPWIAARDA-------AMVALMYGAGLRISEALSL 180 Query: 314 RWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGK 373 +DV + +RI+ K R++PL P V + LNV + ++EG +FR GK Sbjct: 181 TDADVPAR-DILRIQGKGNKVRLVPLIPAVRDALNVYYEKRPFLSDEEGPLFR--GVKGK 237 Query: 374 IIEPRSAH---NRALVLAELPHISL-HGLRRSFGT--LAEWVEVPTGIVAQIMGH 422 + PR + + LP + H LR SF T LA ++ + + ++GH Sbjct: 238 KLNPRIIQKLIEKLRISMGLPDTATPHALRHSFATHLLANGADLRS--IQTLLGH 290 >UniRef50_C0EC03 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EC03_9CLOT Length = 440 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 65/256 (25%), Positives = 101/256 (39%), Gaps = 48/256 (18%) Query: 201 LSELTPDYIAAWLSTERQN-RPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVR 259 L +LT I A+ E + +PT H + L+ + ++ + +IP + A + Sbjct: 157 LCDLTKQDILAFYEKELERVKPTTVKHYHALIHGALNYA----VDKNLIPSNPADRIIIS 212 Query: 260 KMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLT---GARREEIASLRWS 316 K P K D L E L + F ++ + V+LLT G RR E+ L+WS Sbjct: 213 KPEPF---KGDYYLDSEVL-NLFEVIKGHKIEL------VVLLTAFYGLRRSEVIGLKWS 262 Query: 317 DVDFKWSSMRIKD-----KIEGERII---------------PLTPYVSE-LLNVLAQSPN 355 DF + I+ ++GER+ PL P++ E LL Q Sbjct: 263 AFDFNHNCFSIRHTVTTCNVKGERVTIKKDKAKNKSSLRTYPLIPFLKERLLEAKKQQEE 322 Query: 356 S------DVNKEGWVFRSNSKSGKIIEPR---SAHNRALVLAELPHISLHGLRRSFGTLA 406 + NKE + G +I+P S + L L HI H LR + +L Sbjct: 323 NRKLCGRAYNKEYLGYVCVDVIGNLIKPNYVSSTFGKLLAKNNLRHIRFHDLRHTCASLL 382 Query: 407 EWVEVPTGIVAQIMGH 422 VP V + +GH Sbjct: 383 LANGVPMEQVKEWLGH 398 >UniRef50_Q38Y39 Site-specific recombinase, prophage lsa1 integrase n=3 Tax=Lactobacillus RepID=Q38Y39_LACSS Length = 385 Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 56/230 (24%), Positives = 96/230 (41%), Gaps = 40/230 (17%) Query: 233 AFIKWSNYQK---KYQGIIPGDLAQDYNVRKMVPVSASKAD--DCLQKEQLKSWFSAVRS 287 +F W NY KY I+ G + + R +P K D + K+QLK++F+ + Sbjct: 131 SFKPWFNYTSAIFKY-AILQGYIKDNPCTRVTMPKKLDKEDTLNFWDKDQLKTFFNGIDP 189 Query: 288 LNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKI---------------- 331 +N+ +VL TG RR E SL W D++ + +++ I + Sbjct: 190 VNDLEKYTLFRVLAFTGIRRGECLSLTWDDLNVQKATLDINKTLTHGDKGRLLIQPTKTK 249 Query: 332 EGERIIPLTPYVSELLNV---------LAQSPNSDVNKEG-WVFRSNSKSGKIIEPRSAH 381 +G R+I L S LL + + ++NK +F ++ + K + S Sbjct: 250 KGTRVISLDE--STLLYLKKWHLEQRRMYLMLGYNINKSNQLIFATSKNTFKSLNTPSKW 307 Query: 382 NRALV------LAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPS 425 RAL+ A LP I++HG R S + V + +GH+ + Sbjct: 308 LRALIDDANKSGANLPSITVHGFRHSHASALFSAGASIKEVQERLGHEDA 357 >UniRef50_C5SDU6 Integrase family protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SDU6_CHRVI Length = 361 Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 63/250 (25%), Positives = 104/250 (41%), Gaps = 20/250 (8%) Query: 194 ASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLA 253 A L +L LS++TP IA ++ T H Y + A + + K++ + +A Sbjct: 97 AELGHLRLSDVTPAKIAGCRDELLTSKAPATVHGYLAVLASV-LTTCVKRWHWVKESPMA 155 Query: 254 QDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLL--LTGARREEIA 311 +V K P A+ L +++L A R+ +P YL V+L TGARR E+ Sbjct: 156 ---HVDK--PSVANGRTRFLSQDELSRLLEACRASESP--DLYLAVVLAITTGARRGELL 208 Query: 312 SLRWSDVDFKWSSMRIKDKIE-----GERIIPLTPYVSELLNV----LAQSPNSDVNKEG 362 LRW DVD + ++ E G R + + V +L + +D+ Sbjct: 209 GLRWRDVDLVKDVLYLRVDNETTTKGGVRAVRIASQVKPILEARQAGYRRGKVADITGAA 268 Query: 363 WVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGH 422 VF S + + ++ R+ AL A + H LR S + + ++GH Sbjct: 269 LVFPSRVSTRQPVDLRTPFRTALRRAGIEGFRWHDLRHSAASFMAAHGASLVEIGAVLGH 328 Query: 423 KPSALAEKHY 432 + SA K Y Sbjct: 329 R-SAQTTKRY 337 >UniRef50_A6GYU9 Tyrosine recombinase XerC n=7 Tax=Flavobacteria RepID=A6GYU9_FLAPJ Length = 298 Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 61/239 (25%), Positives = 109/239 (45%), Gaps = 17/239 (7%) Query: 198 NLPLSELTPDYIAAWLSTERQNRPTVTAHAYRL--LRAFIKWSNYQKKYQGIIPGDLAQD 255 N PL E++ I +W+ + + T+ ++ L+AF K+ K+ + I P + Sbjct: 43 NTPLEEVSYTLIRSWIVSMVDAEMSNTSVNRKIASLKAFYKFLLKTKQIE-INPLSKHKA 101 Query: 256 YNVRK--MVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASL 313 K +P S ++ D L + Q K+ F +R + + TG RR E+ SL Sbjct: 102 LKTPKKIQIPFSEAELDTVLTQIQYKAGFEGMRD------KLIIDLFYTTGIRRSELISL 155 Query: 314 RWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNV-LAQSPNSD--VNKEGWVFRSN-S 369 + S+ + ++++ K ERIIPL P + + + V LA+ V KE + SN + Sbjct: 156 QISNTNLVAGTIKVIGKRNKERIIPLLPVIIKQIKVYLAERKQLSLIVAKENLILLSNGN 215 Query: 370 KSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALA 428 K+ + R ++ ++E S H LR +F T + +++GH S+LA Sbjct: 216 KANETFVYRLINDYFSNVSEKVKKSPHMLRHTFATHMLNHGADLNSIKELLGH--SSLA 272 >UniRef50_B1YGY2 Integrase family protein n=2 Tax=Exiguobacterium RepID=B1YGY2_EXIS2 Length = 347 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 59/241 (24%), Positives = 97/241 (40%), Gaps = 36/241 (14%) Query: 210 AAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIP-GDLAQDYNVRKMVPVSASK 268 A +L+ +QN P+V K S Q ++ +I G L+++ + P A + Sbjct: 95 AEYLALTKQNAPSVINR---------KLSALQSLFRHLIDIGVLSENPVAKINRPKQAKR 145 Query: 269 ADDCLQK---EQLKSWFSAVRSLNNPIASAY----------LQVLLLTGARREEIASLRW 315 L K ++L + +N A+ Y Q+L +G R E+ L W Sbjct: 146 DPVYLTKREWDELMQLLPSNVEMNAREATHYERDRVRDITLFQLLGYSGMRLSEMTQLTW 205 Query: 316 SDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKII 375 + VDF ++R+ K ER+IPL V L A + + +F+ K GK + Sbjct: 206 NAVDFHEGTIRVIGKGNKERVIPLAKPVRVALRKFAAHYSLTMRGPEPIFQ---KQGKAL 262 Query: 376 EPRSAHN----------RALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPS 425 PR+ + L E I+ H LR +F T V + Q++GH+ Sbjct: 263 SPRAVQHILKRHVDRLRPVLPFLERKQITPHKLRHTFATRLATGGVDVLTIQQLLGHESV 322 Query: 426 A 426 A Sbjct: 323 A 323 >UniRef50_A1RWD6 Phage integrase family protein n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWD6_THEPD Length = 295 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 14/154 (9%) Query: 273 LQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIE 332 L+ E++ +A +L + + + +L TG R E+ SLR SDVD + ++R++ K Sbjct: 114 LEAEEVFRMVNAAENLRDKLI---VLLLFTTGLRVSELVSLRVSDVDLEKRTLRVRGKGS 170 Query: 333 GERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPH 392 ER++ YV++LL + NS+ W+F S++ + I + L E Sbjct: 171 KERLVYFPDYVADLLRSYMKGLNSE-----WLF--PSETAEHIHYTTVERVLKRLKEKAG 223 Query: 393 I----SLHGLRRSFGTLAEWVEVPTGIVAQIMGH 422 I + H LR SF TL+ + + +++GH Sbjct: 224 IEKKVTPHTLRHSFATLSLAAGLDIREIQELLGH 257 >UniRef50_B7RVJ7 Site-specific recombinase, phage integrase family n=4 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=B7RVJ7_9GAMM Length = 392 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 82/369 (22%), Positives = 140/369 (37%), Gaps = 93/369 (25%) Query: 78 AGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKV 137 GKT +TIG D + AR AR L+ I+ G DP+ +A+++K + Sbjct: 55 GGKTAYVTIGRSCDISLAGARKRARHLKAQIELGADPQA------------EAKAKKQVL 102 Query: 138 TFSVAWED-YLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASL 196 T++ + D YL ++ + KR + ++ +S+ G Sbjct: 103 TWNAFFTDHYLPHVK-----QHKRSWKNDLEMHNLRISAFIG------------------ 139 Query: 197 LNLPLSELTPDYIAAWLST--ERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQ 254 N L+++T + + ++ E P H +L+R + +LA Sbjct: 140 -NKRLNKITRSEVQRFHASLVEEDLSPATADHHLKLIRQAL---------------NLAV 183 Query: 255 DYNVRKMVPVSASK-------ADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARR 307 D+ + + PV+ K + L E+++ +++ +N + + LL TGAR Sbjct: 184 DWELLEANPVAKVKLFNQDNQVERYLSDEEMQRLLKVLKTDSNRVVCNVILFLLSTGARV 243 Query: 308 EEIASLRWSDVDFK---WSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSD---VNKE 361 E S WSD+D K W K + +R +PL +L+ L D V K Sbjct: 244 SEALSAEWSDIDRKNRVWVIQATNSKSKKKRSVPLNDVAIGVLDALDTEGKHDRLFVGKR 303 Query: 362 G--------WVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPT 413 G W FR S++G L +H LR S+ +L Sbjct: 304 GPLTTINKVW-FRIRSEAG-----------------LEDYRIHDLRHSYASLLVNAGHSL 345 Query: 414 GIVAQIMGH 422 V Q +GH Sbjct: 346 FEVQQALGH 354 >UniRef50_Q1J1A0 Phage integrase n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1J1A0_DEIGD Length = 291 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 58/194 (29%), Positives = 86/194 (44%), Gaps = 23/194 (11%) Query: 166 YIADHINLSSRGGESKKRGQGPTS----AGPLASLLNLPLSE----LTPDYIAAWLST-- 215 ++AD I R E K RG P + L LL LSE LTP ++ L+ Sbjct: 2 HVADAIEEFQR--EHKARGSTPRTVKWYGETLRRLLTDHLSENVEALTPFTLSRALNIAG 59 Query: 216 ERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQK 275 ER RP A+ R LR F W + + ++P D + K PV + Sbjct: 60 ERGIRPATLANYDRALRGFTAWLHGVE----LLPRDPMKA----KKRPVVRWQMKQVATP 111 Query: 276 EQLKSWFSAVRSLNNPI--ASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEG 333 E++++ F R A L +L G R E+ASL+ +DVD+ S++++ K G Sbjct: 112 EEIRTLFELARRDKRYADRNCAILALLAGCGLRAGEVASLKLTDVDWHGSAVKVSGKT-G 170 Query: 334 ERIIPLTPYVSELL 347 ERI+P+ LL Sbjct: 171 ERIVPMDRTTQRLL 184 >UniRef50_Q2SP99 Integrase n=2 Tax=Gammaproteobacteria RepID=Q2SP99_HAHCH Length = 416 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 87/415 (20%), Positives = 167/415 (40%), Gaps = 74/415 (17%) Query: 71 FVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQA 130 F ++ K ++++G+ + AR +A ++ + G+DP+ + K AE+ A Sbjct: 43 FRYRRPATKKPAKLSLGDYPVISLRAARQQAEIMRQQLFEGLDPQYVQ--KEQRAENANA 100 Query: 131 ESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSA 190 +T +E +L K+ + + R +ADH E++ R S Sbjct: 101 ------ITTQQLFESWL------TLQKSAKEVTDRTLADH--------EARWRVHLEKSL 140 Query: 191 GPLAS--LLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKY-QGI 247 GPL + ++ ++ + +A + E T LL+ +++ + + Sbjct: 141 GPLLAKHVIRRQIAAVLDSMVAKGIKEE-------TRKCLCLLKMLFRFAEERHLIKENP 193 Query: 248 IPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLN-NPIASAYLQVLLLTGAR 306 I G A+ + + P D L +L+S++ + S + P + ++L+LTGAR Sbjct: 194 IEGLSAKSFKITAGAP-----RDRALPLSELRSFWRLLDSASITPATANAFKLLILTGAR 248 Query: 307 REEIASLRWSDVDFKWSSMRIKDKIEGERIIP---------LTPYVSELLNVLAQSPNSD 357 R E+ +RWS++D +G ++P T Y+ L L +S Sbjct: 249 RGEVTMMRWSELDL----------TQGMWVLPPERTKNRKAHTLYLPNLAMRLIESMRPI 298 Query: 358 VNKEGWVFRSNSKSGKIIEPRSAHNRALVLAEL-------PHISLHGLRRSFGTL-AEWV 409 +V G I P S + L L PH ++H LRRS T E + Sbjct: 299 SGHGEYVL----SLGNGITPLSTEGLTVTLRRLSTRLESVPHFTVHDLRRSAATAWGEHL 354 Query: 410 EVPTGIVAQIMGHKP-SALAEKHYRRRPLD----LLRKWHEKIETWILNEAGITI 459 + ++ +++ H+P L + R +D + W E +E + N+ G + Sbjct: 355 KTSPHVIEKMLNHQPRDRLVATYQRAAYIDEQKMAWKAWGEMVENHVANDFGNVV 409 >UniRef50_C6BRQ3 Integrase family protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BRQ3_DESAD Length = 439 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 38/149 (25%), Positives = 60/149 (40%), Gaps = 7/149 (4%) Query: 297 LQVLLLTGARREEIASLRWSDVDFKWSSMRI--KDKIEGERIIPLTPYVSELLNVLAQSP 354 L+ TG R+ EI SL+W DV F + +R+ + G R L P V EL +L + Sbjct: 281 LKTFYYTGGRKNEIFSLKWEDVLFDSNQIRLWTNKRKHGNRESNLIPMVKELKRILTEWK 340 Query: 355 NSDVNKEGWVFRSNSKSGKIIEPRSAHNRALV-----LAELPHISLHGLRRSFGTLAEWV 409 + + +VF K R + + + A + HG+R F T Sbjct: 341 KACPCESDYVFIEVRKKAPTYGQRYVYRKGFMERHCDKAGVKRFGFHGIRHLFATTLYNN 400 Query: 410 EVPTGIVAQIMGHKPSALAEKHYRRRPLD 438 P +V ++M HK ++ LD Sbjct: 401 GQPLAVVQKMMRHKNPNTTVRYLHEMGLD 429 >UniRef50_C7T893 Phage integrase n=5 Tax=Lactobacillus RepID=C7T893_LACRG Length = 385 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 45/192 (23%), Positives = 78/192 (40%), Gaps = 40/192 (20%) Query: 264 VSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWS 323 ++ K ++ KEQ+ +F+ + N+ +VL TG RR E+ +L W+DV FK + Sbjct: 170 LAGDKPENFWTKEQMNHFFACIDQENHFDVFIMFRVLAFTGVRRGELLALTWNDVSFKEN 229 Query: 324 SMRIKDKIE----------------GERIIPL----TPYVSE----------LLNVLAQS 353 S+++ + G R IP+ Y+ L + Sbjct: 230 SIKVNKTLTQGDKGHQIVQAPKTRAGRRTIPVDGQTMAYLKRWRRIQQETFLQLGINTMQ 289 Query: 354 PNSDVNKEGWVFRSNSKSG--KIIEP-RSAHNRALVLAELPHISLHGLRRSFGTLAEWVE 410 PN + +N+K+G + P + H P I++HG R SF + Sbjct: 290 PNQ-------LLFTNTKNGYQSLNTPSKRLHKLQDDNGLTPRITIHGFRHSFISNLLIAG 342 Query: 411 VPTGIVAQIMGH 422 VP V +++GH Sbjct: 343 VPVTSVQKLVGH 354 >UniRef50_A3JR07 Phage integrase n=1 Tax=Rhodobacterales bacterium HTCC2150 RepID=A3JR07_9RHOB Length = 412 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 20/163 (12%) Query: 290 NPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNV 349 + + S ++V + +G R EEI LR +DV + ++ G R IP+ +++ + Sbjct: 253 DQLISDVMRVAIHSGMRIEEIFQLRLADVQDQVFLVKSSKTKAGRRSIPVHKDITQTVAR 312 Query: 350 LAQSPNSD--------VNKEGWVFRSNS-KSGKIIEPRSAHNRALVLAELPHISLHGLRR 400 L Q ++D NK G + S S K K++E S + H RR Sbjct: 313 L-QDTSTDGFLVSGQGANKYGQRYSSFSRKFDKLLESESLRGET---------AFHSFRR 362 Query: 401 SFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRP-LDLLRK 442 SF T E +VP VA++MGH+ L+ Y P +++LR+ Sbjct: 363 SFSTALEANQVPQVEVARLMGHEIGGLSHDLYSSGPAIEVLRQ 405 >UniRef50_UPI0001C375B8 hypothetical protein RflaF_20511 n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C375B8 Length = 465 Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 65/152 (42%), Gaps = 35/152 (23%) Query: 304 GARREEIASLRWSDVDFKWSSMRIKDKI------EGE---------------RIIPLTPY 342 G RR EI LRW +DFK ++ I+ KI GE R +PL P+ Sbjct: 229 GLRRCEILGLRWDAIDFKNKTITIQRKIVSDYDDNGEIKIFVETRLKTNSTRRTLPLIPH 288 Query: 343 VSELL-------NVLAQSPNSDVNKE--GWVFRSNSKSGKIIEPR--SAHNRALVLAE-L 390 + E+L ++ NKE G++ R N G +I P + H ++ L Sbjct: 289 IEEMLLEKKKMEVKFKKACGKSYNKEFDGFICRDN--YGNMISPGYVTQHFHYIITRNGL 346 Query: 391 PHISLHGLRRSFGTLAEWVEVPTGIVAQIMGH 422 H+ H LR S +L +VP + + +GH Sbjct: 347 KHLRFHDLRHSCASLLLAHDVPMKAIQEWLGH 378 >UniRef50_UPI00016C6969 site-specific tyrosine recombinase XerC n=1 Tax=Clostridium difficile QCD-37x79 RepID=UPI00016C6969 Length = 323 Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 38/174 (21%), Positives = 73/174 (41%), Gaps = 15/174 (8%) Query: 276 EQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGER 335 E + + ++ N + + +L+ TG R EI + D++F + K + +R Sbjct: 128 ETMNKLYVDNKNYNTCRDNLIINILIFTGMRIHEIEKMNIKDINFSNGDFEVIGKRKLKR 187 Query: 336 IIPLTPYVSELL--------NVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAH---NRA 384 + L V ++ + + N D ++ ++NS+ + RS +A Sbjct: 188 NVGLNEQVLKMYRDFLYFRNQIEGKKDNKDSTNALFLSKNNSR----LTTRSIERLVEKA 243 Query: 385 LVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLD 438 L LAELPH++ H + SF +L V + + G+K +HY + D Sbjct: 244 LKLAELPHVTPHSFKHSFVSLMSETGVKLEEIGKFTGNKSIETMYRHYMHQNKD 297 >UniRef50_UPI00016BFF50 integrase family protein n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016BFF50 Length = 351 Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 6/143 (4%) Query: 295 AYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELL----NVL 350 A + +LL TG R E L +DVDFK++ ++I K E II + V + L + Sbjct: 190 AIICLLLGTGIRVSECVGLNINDVDFKYNGIKITRKGGNESIIYFSKEVEQGLKNYYEIR 249 Query: 351 AQSPNSDVNKEGWVFRSNSK-SGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWV 409 + + D+++ ++ N + S +++E L+ +L I+ H LR ++GT Sbjct: 250 KEKSSKDLDEPLFLSLQNRRISTRMVEVLVKKYAGLI-TKLKTITPHRLRTTYGTRLYEE 308 Query: 410 EVPTGIVAQIMGHKPSALAEKHY 432 +VA I+GHK +K+Y Sbjct: 309 TGDIYLVADILGHKDVNTTKKYY 331 >UniRef50_D2LD60 Integrase family protein n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LD60_RHOVA Length = 427 Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 25/179 (13%) Query: 263 PVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFK- 321 P S D L ++++++ + A + P ++LL T RR+E+A +RWS++DFK Sbjct: 201 PASEKSRDRLLSEDEMRAAWLAFEATGWPFGP-LAKLLLATAQRRDEVADMRWSEIDFKT 259 Query: 322 --WSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPN-SDVNKEGWVFRSNSKSGKIIEPR 378 W+ + K +PL+ +L+ L SD +VF + K+ P Sbjct: 260 RIWTIPAARSKNGQAHEVPLSEAALAILDGLPHVAGVSD-----YVFTTTGKT-----PV 309 Query: 379 SAHNRA---------LVLAE-LPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSAL 427 S +RA L E +P +LH LRR+ + ++ P +V ++ HK + Sbjct: 310 SGFSRAKKAFDEQITRQLGEGIPGWTLHDLRRTAASGMTALKSPPHVVDAVLNHKSGTI 368 >UniRef50_C3WMN8 Phage integrase n=2 Tax=Fusobacterium RepID=C3WMN8_9FUSO Length = 371 Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 48/193 (24%), Positives = 82/193 (42%), Gaps = 44/193 (22%) Query: 284 AVRSLNN-PIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIK---------DKIEG 333 +R+L+ I + TG R E+ L+WSD+ K + ++I DK++ Sbjct: 189 VLRTLDKRDIVDCLIYFTFYTGLRLGEVLGLQWSDI--KDNMVKITRQYRRNVDVDKVDD 246 Query: 334 ERI---------------IPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPR 378 ++ IPL V ELL D+ ++G + SN GK IEP+ Sbjct: 247 RKLTYTFKELKTKNSAREIPLPDKVQELL--------KDIPRQGNLIFSNL--GKPIEPK 296 Query: 379 SAHNRALVLAE---LPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHY--- 432 R + + +PH S H +R S+ T +++P V ++GH A Y Sbjct: 297 KPQRRIASICKKLNIPHRSFHSIRHSYATRLFEMDIPIKTVQVLLGHGDIATTMDIYTHV 356 Query: 433 -RRRPLDLLRKWH 444 + + L++L K + Sbjct: 357 MKEKKLEVLDKLN 369 >UniRef50_C4SWJ3 Phage integrase n=7 Tax=Gammaproteobacteria RepID=C4SWJ3_YERIN Length = 430 Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 32/138 (23%), Positives = 63/138 (45%), Gaps = 12/138 (8%) Query: 291 PIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEG-ERIIPLTPYVSELLNV 349 P L++ L TG R E+ ++ W DVD ++ +++ G ER + L+ + L + Sbjct: 262 PTIKNVLRLTLWTGCRTGEVCNMAWEDVDLNKGTIHLRETKTGVERYVQLSDQAIDFLKI 321 Query: 350 LAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHN-----RALVLAELPHISLHGLRRSFGT 404 L +N + ++F S + I + N + + ++PH + H LRR+ T Sbjct: 322 LR------LNSDKYLFPSQATKKPIQQKYLTENSWRLRESGQMLDIPHWTPHDLRRTVRT 375 Query: 405 LAEWVEVPTGIVAQIMGH 422 ++ P + ++GH Sbjct: 376 GLSRLQCPNEVAEAVLGH 393 >UniRef50_Q6MC32 Putative uncharacterized protein n=6 Tax=Parachlamydiaceae RepID=Q6MC32_PARUW Length = 336 Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 48/156 (30%), Positives = 75/156 (48%), Gaps = 23/156 (14%) Query: 290 NPIASAYLQVLLLTGA----RREEIASLRWSDVDFKWSSMRI-----KDKIEG-ERIIPL 339 N ++ + LLL G RR E+ SL D+ F ++I K EG ERII + Sbjct: 173 NSLSGMRDKALLLLGFVGAFRRSELVSLTIDDIKFVREGLQITLRKSKTDQEGKERIIAI 232 Query: 340 TPYVSELLNVLAQSPNS--DVNK--EGWVFRSNSKSGKIIEPR-SAHNRALVLAELPHI- 393 PY S +L ++ N D +K EG +FR ++ G+I++ ++ + AL++ H+ Sbjct: 233 -PYGSNILTCPVRTLNDWLDCSKISEGLLFRPINRHGQIMDKALTSKSVALIIKRNKHLE 291 Query: 394 ------SLHGLRRSFGTLAEWVEVPTGIVAQIMGHK 423 S H LR F T A VP ++ + GHK Sbjct: 292 NQKNSFSGHSLRAGFATTAAIFGVPEHLIMKQTGHK 327 >UniRef50_A6P1X5 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A6P1X5_9BACE Length = 322 Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 64/266 (24%), Positives = 112/266 (42%), Gaps = 41/266 (15%) Query: 193 LASLLNLPLSELTPDYIAAWLST---------ERQNRPTVTAHAYRLLRAFIKWSNYQKK 243 L L + LSELT + + +L E P + H R + ++ Q Sbjct: 36 LPGLGEIQLSELTVEQVGDFLEERKRFGGHRPESPEYPGLGEHTMRHIHRLLQQCLDQAI 95 Query: 244 YQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLL- 302 G+I + A+ ++ K VSA + L +++ + A L +L + LL Sbjct: 96 RDGLIADNPARAFHHPKPKKVSA----NVLTPAEVEDYLDAAERL------GHLPMFLLA 145 Query: 303 --TGARREEIASLRWSDVDFKWSSMRIKDKIEGE-----------RIIPLTPYVSELLNV 349 G R+ E+ +L+WSD+D K ++ I +K E R + LT V +LL + Sbjct: 146 LTVGLRQGELIALKWSDLDVKARTLTITEKRSVERRELVEYGNDTRTVSLTEEVVKLLRL 205 Query: 350 LAQSPNSDVNKEGWVFRSNSKSGKIIEP---RSAHNRALVLAELPHISLHGLRRSFGTLA 406 ++ ++ +F + + K P R HN + A L HI LR + L+ Sbjct: 206 ----EHAKHSRSPLMF-MHPATQKPYSPQMVRRLHNEIIQEAGLDHIRFADLRHTCAVLS 260 Query: 407 EWVEVPTGIVAQIMGHKPSALAEKHY 432 + T V+Q++GH A+ ++Y Sbjct: 261 LKNGMDTKEVSQMLGHFRIAMTRQNY 286 >UniRef50_UPI0001C4241D integrase/recombinase n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C4241D Length = 321 Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 74/173 (42%), Gaps = 13/173 (7%) Query: 262 VPVSASKADDCLQKEQLKSWFSAVRSLNNPIAS---AYLQVLLLTGARREEIASLRWSDV 318 +P ASK L +E++ F A N P+ A L++L TG R E + L +D+ Sbjct: 124 LPKQASKLPSFLYEEEMDELFKAFEG-NTPLDKRDRAILELLYATGMRVGECSQLDVADI 182 Query: 319 DFKWSSMRIKDKIEGERIIPLTPYVSELLNV--------LAQSPNSDVNKEGWVFRSNSK 370 D + + +K K ER +P+ + + L+ L + NS+ + +R Sbjct: 183 DLRIGTAFVKGKGNKERYVPIGSFACDALHEYIEDARVNLLKKGNSETKRLFLNYRGGPL 242 Query: 371 SGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHK 423 + + I R R + HI H LR SF T +V +++GH+ Sbjct: 243 TDRSIR-RMLAKRVEEASMQKHIRPHDLRHSFATHLLNNGADLRVVQELLGHE 294 >UniRef50_B0TQV5 Integrase family protein n=1 Tax=Shewanella halifaxensis HAW-EB4 RepID=B0TQV5_SHEHH Length = 358 Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 84/397 (21%), Positives = 158/397 (39%), Gaps = 66/397 (16%) Query: 71 FVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQA 130 F ++ + GK R +G+ + + DARA L+ + ++G+D + KA Q Sbjct: 2 FQYRYRFEGKGRRYDLGSYPNLSLSDARACVPELKGITESGMDVKSVKAS--------QK 53 Query: 131 ESRKT--KVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPT 188 +KT K + +L + T + T+R Y RY + Sbjct: 54 VGKKTVLKPKLEDCMDLFLDKYVTSLRESTQRFY--RYTLNKY----------------- 94 Query: 189 SAGPLASLLNLPLSELT-PDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGI 247 + + P+ ++T ++ A + E + P + + L+ + + + Sbjct: 95 ----IPNAFEQPVEDITRKEWYAYFDGVEESSTPHMANSLIKKLKTCLNFCKER------ 144 Query: 248 IPGDLAQDYNVR----KMVPVSASKADDCLQKEQLKSWFSAV-RSLNNPIASAYLQVLLL 302 DL D+++ K V +++ D ++K+ RS + P +++++L Sbjct: 145 ---DLISDHSLNEIRTKSVGSASNTGDRTPSVVEIKAILEEFGRSKSYPTTVNVVRMIVL 201 Query: 303 TGARREEIASLRWSDVDFK---WSSMRIKDKIEGERIIPLTPYVSELL--NVLAQSPNSD 357 TGAR E+ ++ D++F W+ + K K + PL EL+ V SD Sbjct: 202 TGARCGEVRCMQSKDINFDTGIWTVPKEKSKTNTRILRPLGLKALELVKWQVKTFGGFSD 261 Query: 358 VNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHI---SLHGLRRSFGTLAEWVEVPTG 414 +VF S S +I P + + + + I S+H RRS TL VP Sbjct: 262 -----YVFPSASYKNEI-GPATINKMCRTIVKRMDIERWSVHDFRRSLSTLLTEDGVPLH 315 Query: 415 IVAQIMGHKPSALAEKHYRRRPLDLLRK----WHEKI 447 I +++GHK + + + ++ RK W E I Sbjct: 316 ITEKMLGHKLGGILSVYNKSEYIEDQRKAYKVWEEMI 352 >UniRef50_Q2W780 Integrase n=1 Tax=Magnetospirillum magneticum AMB-1 RepID=Q2W780_MAGSA Length = 321 Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 44/162 (27%), Positives = 70/162 (43%), Gaps = 10/162 (6%) Query: 290 NPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGE--RIIPLTPYVSELL 347 +P +L + L TGAR+E I L W VDF + + +K G+ ++P+T + L Sbjct: 166 HPHLVTFLHLALATGARKEAILELTWPQVDFSAGRIFLGNKPGGKARAVVPMT----KSL 221 Query: 348 NVLAQSPNSDVNKEGWVFR-SNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLA 406 + Q+ N G+V +K G I + A A A L ++ H LR + Sbjct: 222 RTVLQAQNQRREDSGYVVEYGGAKVGNI---KKAFATAARNAGLDDVTPHDLRHTAAVWM 278 Query: 407 EWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIE 448 V +AQ +GH + E+ Y R D L+ +E Sbjct: 279 AADGVSMEKIAQYLGHSDHKITERVYARFSPDHLKDAAAALE 320 >UniRef50_C8X726 Integrase family protein n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8X726_NAKMY Length = 371 Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 43/144 (29%), Positives = 67/144 (46%), Gaps = 21/144 (14%) Query: 299 VLLLTGARREEIASLRWSDVDFKWSSMRIK---DKIEGE------------RIIPLTPYV 343 V+LL G RR E+ LRW +VD + ++ + +++G+ R +PL V Sbjct: 199 VMLLLGLRRSEVCGLRWDNVDLENRTLSVTHSVQRVDGKLRELPTKTRRSTRTVPLPAMV 258 Query: 344 SELL--NVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAE---LPHISLHGL 398 + L + A P S E V+ +K G +EPR+ R + LAE + + LH L Sbjct: 259 HQALVTHRAAMMPTSQYLPEP-VYVFGTKIGTPMEPRNLTRRWVTLAERQGIRRVPLHAL 317 Query: 399 RRSFGTLAEWVEVPTGIVAQIMGH 422 R S +L V V +I+GH Sbjct: 318 RHSCVSLLLAQGVHPRTVMEIVGH 341 >UniRef50_A3WZM1 Possible phage-related integrase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WZM1_9BRAD Length = 411 Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 51/194 (26%), Positives = 91/194 (46%), Gaps = 27/194 (13%) Query: 272 CLQKEQLKSWFSAVRSLNNPIA-SAYLQVLLLTGARREEIASLRWSDVDFK-WS--SMRI 327 L ++++ + A+ + + P Y+++LLLT RR E A + ++V+ W+ R Sbjct: 205 VLTDDEIRDIWQALETADVPSCYPRYVKMLLLTMTRRNESADMNAAEVEGDLWTIPGKRY 264 Query: 328 KDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALV- 386 K+K++ +IPL+P L+ + P + +VF ++ GK P S ++A V Sbjct: 265 KNKLD--HVIPLSPDAKALI---GEKPKRFKGNDWFVF--STTDGK--RPFSGFSKAKVS 315 Query: 387 -------------LAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYR 433 A +PH +LH LRR+ TL +VP + MGH + + + R Sbjct: 316 LDLEIAKRRKAEGRARMPHWTLHDLRRTARTLMSRAKVPEDHAERAMGHVIAGVRGTYDR 375 Query: 434 RRPLDLLRKWHEKI 447 LD R+ +K+ Sbjct: 376 YSFLDEKREAFQKL 389 >UniRef50_D1RC05 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1RC05_9CHLA Length = 369 Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 44/179 (24%), Positives = 78/179 (43%), Gaps = 6/179 (3%) Query: 255 DYNVRKMVPVSASKADDCLQKE-QLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASL 313 D R++ + SK D + E + F ++ N + + + TG RR EI L Sbjct: 161 DNPCRRVSKFTESKGRDRIVAENEFTRLFEECKNSRNEHLLPVVVLAVTTGMRRGEILGL 220 Query: 314 RWSDVDFKWSSMRIKDKIEG-ERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSG 372 W ++ ++ +K+ G +R + + ELL Q N + +VF + + G Sbjct: 221 TWDCINLDRQTIILKETKNGKQRTVSIVGEALELLRSHYQKRNPNT---PYVFPAKKRFG 277 Query: 373 KIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKH 431 KI R A + AL A + ++ +H LR +F T A +A MGH+ + ++ Sbjct: 278 KIC-IRKAWDEALKRAGIQNLRIHDLRHTFCTYASETGASILELAAAMGHQTLQMVNRY 335 >UniRef50_D2RA91 Site-specific tyrosine recombinase XerC n=10 Tax=Bifidobacteriaceae RepID=D2RA91_GARVA Length = 322 Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 62/267 (23%), Positives = 108/267 (40%), Gaps = 33/267 (12%) Query: 201 LSELTPDYIAAWLSTE-RQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVR 259 +SELT D + +W++ E R + + A +R F W + + G P ++ ++ Sbjct: 62 ISELTTDDLRSWMADESRSHARSSLARKVVAVRGFFAWCQHVEYISG-NPAEILMTSKIK 120 Query: 260 KMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIAS-------------AYLQVLLLTGAR 306 M+P L + Q +S + V S N S A L++L TG R Sbjct: 121 NMLP-------SVLDEYQAESLMNNVDSKANVSTSCPKNQKAVGLRNAAILELLYATGIR 173 Query: 307 REEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDV----NKEG 362 E+ SL D++F ++++ K +R++P + L+ ++ + E Sbjct: 174 VGELTSLNIQDINFSSHTIKVTGKGNKQRVVPFGVPAYKALSAWISKDGREILLRNSVEE 233 Query: 363 WVFRSNSKSGKIIEPR----SAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQ 418 VF GK I+ R H+ A A +P IS H LR S T V + Sbjct: 234 AVFLGT--RGKRIDQRLVRQIVHDEAKS-AHVPDISPHALRHSAATHMLNGGADLREVQE 290 Query: 419 IMGHKPSALAEKHYRRRPLDLLRKWHE 445 ++GH +++ L RK+ + Sbjct: 291 LLGHSSLNTTQRYTHVSIESLKRKYSQ 317 >UniRef50_A1WTV4 Phage integrase family protein n=1 Tax=Halorhodospira halophila SL1 RepID=A1WTV4_HALHL Length = 379 Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 79/368 (21%), Positives = 142/368 (38%), Gaps = 53/368 (14%) Query: 60 LACRATSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKA 119 + R T A F +AG T + + + DAR+ AR +++ +G DP+ K Sbjct: 31 VEVRPTGSATYFYRYRNHAGLTRSCKLARFREISLKDARSLAREKASIVASGHDPQEEKN 90 Query: 120 VKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGE 179 + A S ++Y +E + KR + T D I L+ Sbjct: 91 TRRA----------------SPTLKEYAEECYLPHAKSYKRSWKT----DEIMLNHHA-- 128 Query: 180 SKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLST--ERQNRPTVTAHAYRLLRAFIKW 237 L +L +S++ + + A ++ R P+ L+ K Sbjct: 129 -------------LPTLGTKKMSDINRNQVEAIMNDMKSRGYAPSTVDRVLTLISYMFKV 175 Query: 238 SNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYL 297 + IPG ++ K PV +K ++ L +E++ A R N+P + + Sbjct: 176 A-----MDNEIPGVVSNPTEKIKR-PVIDNKIENYLTREEVNRMLEAARRRNHPHIYSII 229 Query: 298 QVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSD 357 ++ +LTGAR+ EI S R+ D D I G R + L +++ L + +D Sbjct: 230 RMAVLTGARKAEILSARFEDFDLDNKIWNIPKGKNGSRKVILAEKAVQMVKELPKQEGTD 289 Query: 358 VNKEGWVF---RSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTG 414 + +F ++ I +P A R + E + H LR S+ +L V Sbjct: 290 L-----LFPQPGTDKPYQCIQKPFKAVLRDSGIDE--SVRFHDLRHSYASLLVQGGVNIY 342 Query: 415 IVAQIMGH 422 V +++GH Sbjct: 343 EVKELLGH 350 >UniRef50_C7Y7Z4 Lj965 prophage integrase n=1 Tax=Lactobacillus crispatus MV-1A-US RepID=C7Y7Z4_9LACO Length = 379 Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 39/182 (21%) Query: 276 EQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI------KD 329 ++LK + + +++ + +L +L TG R+ E +L WSD D++ ++ I K Sbjct: 185 DELKLFLDTAKEISDQVYFYFL-ILATTGIRKSEAIALHWSDFDYEHKTIHIQRTTAYKL 243 Query: 330 KIEGE------------------RIIPLTPYVSELLNVLAQSPNSDV--NKEGWVFRSNS 369 KI+G RI+P++ V E+ + N V N +G +RS S Sbjct: 244 KIKGNGEIETNDYGTQIPKGNETRIVPMSDLVYEISLHCRKDLNPLVFHNTKGDYYRS-S 302 Query: 370 KSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAE---WVEVPTGIVAQIMGHKPSA 426 K+ K + N L I++HGLR SF T+A W V V ++GHK Sbjct: 303 KADKWKKQIYEKN-----PNLKKITVHGLRHSFATIANDNGWNMVD---VKNVLGHKSLD 354 Query: 427 LA 428 L Sbjct: 355 LT 356 >UniRef50_C6LKW3 Tyrosine recombinase XerD n=3 Tax=Clostridiales RepID=C6LKW3_9FIRM Length = 305 Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 49/182 (26%), Positives = 81/182 (44%), Gaps = 16/182 (8%) Query: 271 DCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDK 330 DCL+K L + +R + A ++VL TGAR EI+++R V+ +RI K Sbjct: 121 DCLKKNVLTGYKYQLRDI------AVVEVLFATGARVYEISNIREDSVNLNSGQIRIMGK 174 Query: 331 IEGERIIPLTPYVSELLNVLAQSPNSDVN--KEGWVFRSNSKSGKIIEP--RSAHNRALV 386 ER + ++ S +L VL + + N K+ F N++ + E RS + Sbjct: 175 GGKERYVQISN--SSVLAVLRKYYKQNENEIKKSGCFFINNRGNRYTEQSIRSMLKKYAK 232 Query: 387 LAELP-HISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYR---RRPLDLLRK 442 A + +I+ H R SF T V V QI GH + + ++ ++LR+ Sbjct: 233 QAGIARNITPHMFRHSFATYLIEEGVDVSCVQQIRGHSSIKTTQIYIHIAAKKQAEILRE 292 Query: 443 WH 444 H Sbjct: 293 MH 294 >UniRef50_Q1VYR3 Putative site-specific recombinase n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=Q1VYR3_9FLAO Length = 296 Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 54/226 (23%), Positives = 98/226 (43%), Gaps = 18/226 (7%) Query: 208 YIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSAS 267 +I L+ + NR T L+ F K + K Q I + Q +++ +P Sbjct: 60 FIELGLTHKTINRKLST------LKTFFK---FLLKIQVIAVNPMVQHKSLK--LPKRQQ 108 Query: 268 KADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI 327 +A L+ E++ +F V + +++L TG RR+E+ L+ S +D K +++ Sbjct: 109 EAFSVLELEKVSDYFEDV-TFEGLRDHLIIELLYATGMRRQELIDLQLSSLDLKQQQLKV 167 Query: 328 KDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEP----RSAHNR 383 + K ER+IPL +S L+ Q + + + +F ++ GK I P R H+ Sbjct: 168 RGKRNKERLIPLLDSISFLIERYLQERSVLLPQGSQLFVTS--KGKAIYPNLVYRVVHSY 225 Query: 384 ALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAE 429 ++ +S H LR +F T + ++GH A E Sbjct: 226 FEKVSTKKKLSPHLLRHAFATHLLDKGADISAIKDLLGHSSLASTE 271 >UniRef50_C2E2T4 Bacteriophage integrase n=5 Tax=Lactobacillus RepID=C2E2T4_LACJO Length = 386 Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 41/174 (23%), Positives = 72/174 (41%), Gaps = 27/174 (15%) Query: 275 KEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIE-- 332 KE+L + A + NP + ++L TG R+ E +L+WSD+DF+ ++RI + Sbjct: 183 KEELNKYLDACKQKKNPRVYLFFRLLAYTGMRKGEALALKWSDIDFENETIRINKTLSLG 242 Query: 333 --------------GERIIPLTPYVSELLNVLAQSPNSDVNKEGW-------VFRSNSKS 371 R I + L + ++ K G+ + SN + Sbjct: 243 THNSLVIGTPKTKASNRTIQVDEQTIYYLQEWRKRQRKELFKVGFNALTDDQLLFSNG-N 301 Query: 372 GKIIEPRSAH--NRALVL-AELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGH 422 ++I P N+ + A L HI++HG R + +L P V + +GH Sbjct: 302 NQLIRPWLVQYWNKTIAKDARLKHITVHGFRHTHASLLFEAGTPMQDVKERLGH 355 >UniRef50_A5WEX8 Phage integrase family protein n=2 Tax=Psychrobacter RepID=A5WEX8_PSYWF Length = 425 Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 38/136 (27%), Positives = 70/136 (51%), Gaps = 8/136 (5%) Query: 293 ASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEG-ERIIPLTPYVSELLNVLA 351 A + + +LTG R E +L WSDVD + +D G + +PL ++ LL Sbjct: 250 ARDLMLMFMLTGVRLNEGQNLEWSDVDLDNGYIVFRDTKNGSDYDMPLGKILAALLK--E 307 Query: 352 QSPNSDVNKEGWVFRSNSKS--GKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWV 409 + SD ++ WVF S+ + G I + ++ R L + +I+ H LRR+FGT+A + Sbjct: 308 RKRLSDGSR--WVFPSSQSNTDGPITDLTRSYKRIGELNGM-YITPHDLRRTFGTVANSL 364 Query: 410 EVPTGIVAQIMGHKPS 425 + ++ +++ H+ + Sbjct: 365 NINYPVLKRLLNHRET 380 >UniRef50_UPI0001C41B06 tyrosine recombinase XerC n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41B06 Length = 326 Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 9/130 (6%) Query: 297 LQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNS 356 L+ L TG R E+ L+ D+DF ++R++ K E +RI+ +L++ ++ N Sbjct: 176 LEFLYSTGLRISELVKLQKKDIDFDERTIRVRGKGEKDRIVLFDENTRDLIDNYIETQNQ 235 Query: 357 DVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHI----SLHGLRRSFGTLAEWVEVP 412 K ++F +K+G+ + PR AE I + H LR SF T V Sbjct: 236 ---KSEYLFI--NKNGRKLTPRYVQMMIKEYAEKAGIKKKVTPHVLRHSFATHLLKNGVD 290 Query: 413 TGIVAQIMGH 422 ++ Q++GH Sbjct: 291 IRVIQQLLGH 300 >UniRef50_Q1MRZ7 Prophage DLP12 integrase (Fragment) n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=Q1MRZ7_LAWIP Length = 388 Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 39/162 (24%), Positives = 80/162 (49%), Gaps = 8/162 (4%) Query: 273 LQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIE 332 L + QLK+ A+ + + + ++ L++ L+TG R+ + +L W+D+DF+ + ++ K Sbjct: 203 LTETQLKALMEALDAETDQVMASCLRLALVTGMRKGALLALEWTDLDFEQGIITLQGKSA 262 Query: 333 GERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELP- 391 + P +L + P++ +VF N+K K + RS NR A+LP Sbjct: 263 KKGKTAYIPMSEAAKIILEKLPHTSR----YVF-PNTKGEKRSDFRSMPNRIKQKAQLPA 317 Query: 392 -HISLHGLRRSFGT-LAEWVEVPTGIVAQIMGHKPSALAEKH 431 HGLR ++ + LA +V + +++ H + +++ Sbjct: 318 DFRPFHGLRHTYASHLASSGKVDLYTLQKLLTHSSPQMTQRY 359 >UniRef50_Q65KT3 Lambda integrase-like protein(Phage related) n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65KT3_BACLD Length = 379 Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 39/174 (22%), Positives = 72/174 (41%), Gaps = 26/174 (14%) Query: 274 QKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKD---- 329 +K+++K++ S P VL+ TG R+ E+ +L W DVD K ++ IK Sbjct: 178 EKDEIKTFLEKAHSQLAPQDYVMFYVLIFTGMRKGELIALEWKDVDLKEKTINIKQTMFF 237 Query: 330 -----------KIEGERIIPLTPYVSELLN---------VLAQSPNSDVNKEGWVFRSNS 369 K +RII + +++L +L+ S+ + + R + Sbjct: 238 ENGKEVIQTTKKYHSKRIITIDDQTAQILKKWRTQQKEMLLSNGITSEA--KYVLIRGDM 295 Query: 370 KSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHK 423 + ++ P NR + +L I++HG R S ++ V +GHK Sbjct: 296 RPLRLAYPNDLLNRMITKNKLHRITIHGFRHSHASILFEAGASIKEVQARLGHK 349 >UniRef50_A2RHC7 Phage integrase n=3 Tax=root RepID=A2RHC7_LACLM Length = 394 Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 53/228 (23%), Positives = 96/228 (42%), Gaps = 25/228 (10%) Query: 246 GIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSL-----NNPIASAYLQVL 300 G++ + + V K+ S K L EQLK +F + +L N + + ++L Sbjct: 164 GLVKDNPCVNVIVPKVRLESTEKKVKYLTAEQLKIFFEYIGALPKEKYTNELMTGLCRLL 223 Query: 301 LLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLN-VLAQSPNSDVN 359 + +G R E +L WSD+DFK S+ + K +I TP + VL S +V Sbjct: 224 VASGLRIGEAVALSWSDIDFKTGSVSV-SKTTLRAVIQSTPKTDKSNRIVLIDSKAVEVL 282 Query: 360 KEGWVFRSN---------------SKSGKIIEPRSAHN---RALVLAELPHISLHGLRRS 401 K +F++ +++G +++ ++ + L +LP + HG R S Sbjct: 283 KHWELFQAKYFMSIGKGKQELVFPNRTGGVLDYQTMRPFLIKWLRACQLPQVGFHGFRHS 342 Query: 402 FGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIET 449 +L +VP + + +GH + Y D K E+ E+ Sbjct: 343 HASLLLNADVPYKEIQERLGHASIKMTMDTYSHLESDNKIKAVERFES 390 >UniRef50_UPI00016C64E8 integrase/recombinase n=1 Tax=Clostridium difficile QCD-63q42 RepID=UPI00016C64E8 Length = 405 Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 11/135 (8%) Query: 295 AYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERI-IPLTPYVSELLN--VLA 351 A + +TG R +I +L + +D+ +RI + G+ + +PLT V E + +L Sbjct: 239 AMIMTAAVTGIRSVDIINLTFDAIDWINGEIRITQRKTGKTLALPLTTDVGEAIQDYILN 298 Query: 352 QSPNSDVNKEGWVF-RSNSKS---GKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAE 407 P SD+ +VF R+ S + G+ + P N LP + HGLRR+ GT Sbjct: 299 GRPKSDLP---FVFLRAKSPAVQLGRTL-PYQTFNVYRKKLGLPKCTFHGLRRAVGTNMV 354 Query: 408 WVEVPTGIVAQIMGH 422 VP V+Q++GH Sbjct: 355 ISGVPVTTVSQVLGH 369 >UniRef50_A1V9J7 Phage integrase family protein n=1 Tax=Desulfovibrio vulgaris DP4 RepID=A1V9J7_DESVV Length = 400 Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 50/194 (25%), Positives = 91/194 (46%), Gaps = 21/194 (10%) Query: 221 PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKS 280 P H LLR +++ + + +PG ++ + PV +K ++ L EQ ++ Sbjct: 154 PQSVKHVLALLRRVLRYC--EGRGLCSLPGRALLIFD---LPPVDNAKTEN-LTHEQARA 207 Query: 281 WFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKD---KIEGERII 337 A+ + + +A +++ LLTG RR + L+W D+DF+ + + ++ K I Sbjct: 208 LLEALDADPDQNLAAMVRLALLTGMRRGALFGLQWGDLDFRNARITLRGATAKSGKTSSI 267 Query: 338 PLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHI--SL 395 P+T ++L + ++ + +VF GK +E R NR + A LP L Sbjct: 268 PMTDDARKVLLGVQRTESL------YVF-PGRNGGKRVECRRFLNRIRLRAGLPDGFRPL 320 Query: 396 HGLRRSFGTLAEWV 409 HGLR +F A W+ Sbjct: 321 HGLRHTF---ASWL 331 >UniRef50_A1SRZ5 Phage integrase family protein n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SRZ5_PSYIN Length = 337 Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 44/168 (26%), Positives = 71/168 (42%), Gaps = 23/168 (13%) Query: 273 LQKEQLKSWFSAVRSLNNPIASAYLQVLLL------TGARREEIASLRWSDVDFKWSSMR 326 L E+L F+ V+ S + Q+ LL TGARR E+ +L W D++FK + Sbjct: 162 LSDEELSILFAMVKQ------SKWDQLFLLVLMAITTGARRSEMLTLEWDDINFKTKTAH 215 Query: 327 IKDKIEGE-RIIPLT-PYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAH-NR 383 + + GE RI+ LT ++EL+ G+VF H Sbjct: 216 LPNTKNGEQRILTLTGDVITELMKYRCIG--------GYVFPHPDDPTIYFRNFDIHWQS 267 Query: 384 ALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKH 431 AL E+ H LR + +L +AQ++GHK + +++ Sbjct: 268 ALREGEITDFRFHDLRHTCASLLAMNGASLLEIAQVLGHKSITMTQRY 315 >UniRef50_Q3JF08 Phage integrase n=2 Tax=Nitrosococcus oceani RepID=Q3JF08_NITOC Length = 251 Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 4/151 (2%) Query: 282 FSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGE-RIIPLT 340 A R +N + + L TGARR EI +LRW +VD + + + + GE R +PL Sbjct: 82 LKACRGSSNSFLYPAVVLALSTGARRMEIMALRWRNVDLQRGLISLHETKNGERRALPLA 141 Query: 341 PYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRR 400 + + + L++ D + +F SN + ++ R AL A + H LR Sbjct: 142 GHALDCVKRLSKVRQIDTD---LLFPSNHNPQQPLDLRKPWEIALKQAGIEDFRWHDLRH 198 Query: 401 SFGTLAEWVEVPTGIVAQIMGHKPSALAEKH 431 S + +A+++GHK + +++ Sbjct: 199 SAASYLAMNGATLAEIAEVLGHKTLQMVKRY 229 >UniRef50_C7CCC6 Putative phage integrase n=1 Tax=Methylobacterium extorquens DM4 RepID=C7CCC6_METED Length = 451 Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 44/149 (29%), Positives = 68/149 (45%), Gaps = 18/149 (12%) Query: 297 LQVLLLTGARREEIASLRWSDVDFKWSSMRI-KDKIE-GERIIPLTPYVSELLNVLAQSP 354 +++ LLTG R E+ LR DV + RI + K E RI+P+ V ++ S Sbjct: 273 MRLGLLTGCRIGELCQLRVDDVIESQQAFRIPQGKTENARRIMPVHRAVWPIIQRRIAS- 331 Query: 355 NSDVNKEGWVFRSNSKSGK------IIEPRSAHNRALVLAELPHISLHGLRRSFGTLAE- 407 + +GW+F + +G I+ R A R VL + + H RRSF T E Sbjct: 332 ----SSDGWIFSGLTPAGPDGKRSWIVVKRYATFRQAVLGQSGEVDFHSFRRSFATYLER 387 Query: 408 ----WVEVPTGIVAQIMGHKPSALAEKHY 432 + V + ++A++MGH LA Y Sbjct: 388 ASTHSMAVNSSVIAELMGHVKPTLALAVY 416 >UniRef50_B1C1D6 Putative uncharacterized protein n=2 Tax=Clostridium spiroforme DSM 1552 RepID=B1C1D6_9FIRM Length = 317 Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 59/283 (20%), Positives = 123/283 (43%), Gaps = 49/283 (17%) Query: 198 NLPLSELTPDYIAAWLSTERQNRPTVTAHAYRL---LRAFIKWSNYQKKYQGIIPGDLAQ 254 N+ ++E++ + ++ + N+ T+ L L+A + ++ QKKY + Q Sbjct: 43 NMNINEISEKIVISYFNDLLNNKIYATSTIKTLRYVLKAILDYA--QKKYN--FNNNSFQ 98 Query: 255 DYNVRKMVPVSASKADDCLQKEQLKSW-FSAVRSLNNPIASAYLQVLLLT---GARREEI 310 ++K PV K QK+QL+ + F+ ++ Y V++L+ G R E+ Sbjct: 99 YIKLKKSKPVI--KILTLKQKKQLEQYCFNHQKN--------YTLVIILSLYGGFRLGEV 148 Query: 311 ASLRWSDVDFKWSSMRIKDKIE----------------------GERIIPLTPYVSELLN 348 A L+W DVDF+ + I IE +RI+P+ ++ + L Sbjct: 149 AGLKWCDVDFENHCISINRTIERLKTTNSNSKTTLMALDPKTHTSKRIVPMPEFIIDFL- 207 Query: 349 VLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSA--HNRALVLAELPHISLHGLRRSFGTLA 406 + S+ K+ +++ + S KI +PR+ H + + H LR ++ T Sbjct: 208 IKYYKKQSNPKKQNYIY---TNSIKIPDPRNIQYHFHKICNTLEFKCNYHTLRHTYATNC 264 Query: 407 EWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIET 449 ++ +++++GH ++ + Y L+ + K++T Sbjct: 265 VMNDIDIKSLSEMLGHSNVSITLELYVHSSLEFKKSQINKLKT 307 >UniRef50_Q1AUQ4 Phage integrase n=3 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AUQ4_RUBXD Length = 379 Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 56/228 (24%), Positives = 96/228 (42%), Gaps = 43/228 (18%) Query: 223 VTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWF 282 + A +R L ++W G++P ++++ ++ K+V S+ D L E+ + + Sbjct: 137 IHAVLHRALTQALRW--------GLVPRNVSEAVDLPKLV----SEEVDALTPEEARKFL 184 Query: 283 SAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSS----------MRIKD--- 329 A R + + Y+ V ++TG RR E+ LRWSD+D ++ R++D Sbjct: 185 DAARG--DRFEALYV-VAVMTGMRRGELLGLRWSDIDLGQNAPATLRVGRQLQRMRDGSG 241 Query: 330 ------KIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSN-----SKSGKIIEPR 378 K R I L E L + K G ++R S+ G +EP Sbjct: 242 LKFVAPKGGKGRTIRLPSRAVEALKAHRARQAEERLKAGPLYRDEGLVFASEVGTPLEPS 301 Query: 379 SAHNRA----LVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGH 422 + R+ L A LP I H LR + T+ V V +++GH Sbjct: 302 NIDRRSFKPLLKKAGLPDIRFHDLRHTCATVLLSQGVNPKFVQELLGH 349 >UniRef50_A7GRV3 Phage integrase family protein n=18 Tax=Bacillus cereus group RepID=A7GRV3_BACCN Length = 376 Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 24/141 (17%) Query: 301 LLTGARREEIASLRWSDVDFKWSSMRIKDKIE--------GE-------RIIPLTPYVSE 345 L TG R E+ +L+W D+DF+ ++ ++ + GE R+IP+T E Sbjct: 195 LHTGMRIGEVLALQWGDIDFEKKTIHVQRTLTLVDGKYVLGETKTEASNRVIPMT---EE 251 Query: 346 LLNVLAQSPNSDVNKEGWV-FRSNSKSGKIIEPRSAHNRALVLAE---LPHISLHGLRRS 401 L++ L + KE + +++ KI+ P + + L E +P+I H +RR+ Sbjct: 252 LVDELVEY--QKYKKENPLDLLICTRNKKIVHPYTIRYQMKALCEAIDVPYIRFHDIRRT 309 Query: 402 FGTLAEWVEVPTGIVAQIMGH 422 F T+ V +VA+++GH Sbjct: 310 FTTILIDSNVNAKVVAKLLGH 330 >UniRef50_A0LEB8 Tyrosine recombinase xerC n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=XERC_SYNFM Length = 328 Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 75/315 (23%), Positives = 125/315 (39%), Gaps = 62/315 (19%) Query: 135 TKVTFSVAWEDYLQELRT--GISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGP 192 ++ T+S A ++ LR G+SA+T R Y+ ++++ G + R Sbjct: 14 SEATWSEASARFIAHLRHERGLSAETVRAYAGDLDQFREHMNATAGTADPR--------- 64 Query: 193 LASLLNLPLSELTPDYIAAWLSTERQNRP-TVTAHAYRLLRAFIKWSNYQK--------- 242 LS++ D I +L+ + R T A LR+F + N ++ Sbjct: 65 --------LSQVDADAIRGYLAALHKTRKKTSRARKLSTLRSFYHFLNDRELVRENPAAL 116 Query: 243 ----KYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQ 298 K IP L D + ++A A + ++W A + Sbjct: 117 VAYPKLGTKIPSFLGVDDVFHLLDSLNAGAARAGASWRRCRNW-------------ALFE 163 Query: 299 VLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLT----PYVSELLNVL-AQS 353 + TG R E+A + SDVDF +R+ K ERI+P+ V L VL +Q Sbjct: 164 CMYSTGVRVSELAGMDESDVDFHEGMVRVLGKGSKERIVPVGGKALDAVKLYLRVLDSQF 223 Query: 354 PNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAEL------PHISLHGLRRSFGTLAE 407 P + + G N++ G+ + RS H L+ EL H+S HGLR +F T Sbjct: 224 P--EARRMGSALFRNAR-GRRLTTRSVHR--LLRMELRRCGLWQHLSPHGLRHTFATHLL 278 Query: 408 WVEVPTGIVAQIMGH 422 + +++GH Sbjct: 279 NSGADLRAIQEMLGH 293 >UniRef50_A3V8A4 Possible phage-related integrase n=2 Tax=Rhodobacteraceae RepID=A3V8A4_9RHOB Length = 386 Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 19/161 (11%) Query: 270 DDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDF---KWSSMR 326 D L +++L + + + P Q+L+LT RR+E+A +RWS++D +W + Sbjct: 197 DRVLSRDELCAVWETAEQMGFPFGR-ITQLLILTAQRRDEVAGMRWSELDLDRARWIISK 255 Query: 327 IKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRA-L 385 + K I+ L+P LL+ + + D+ +F + +S S ++A Sbjct: 256 ERAKNGKAHIVHLSPQALALLSTIPRQNGVDL-----IFTTTGRSAV-----SGFSKAKA 305 Query: 386 VLAELPHIS---LHGLRRSFGT-LAEWVEVPTGIVAQIMGH 422 L H+S H LRRS T +AE + + +V +I+ H Sbjct: 306 ALDARSHVSDWRFHDLRRSAATFMAEELRITPVVVDRILNH 346 >UniRef50_A3VLD9 Phage integrase n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VLD9_9RHOB Length = 360 Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 93/406 (22%), Positives = 155/406 (38%), Gaps = 87/406 (21%) Query: 52 LWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTG 111 +WD ++ K +Q KT+R +G++ + + AR EA +L+ TG Sbjct: 22 IWDTEIKGFYLVTGKTKKTLYYQKDVNRKTVRHKLGSLPEITVAAARVEAEQLRAEHATG 81 Query: 112 IDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHI 171 A A+ L A T LR RP Sbjct: 82 -----------AVAQRLAASRIPT--------------LRDATDTYLARP---------- 106 Query: 172 NLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT-PDYIA--AWLSTERQNRPTVTAHAY 228 L S +++ R Q L L+L L E+T D +A A L + + A Sbjct: 107 KLRSEHNKNQVRAQ---MENKLTDWLDLRLDEITKADCVAMHARLGADGERA------AN 157 Query: 229 RLLRAFIKWSNYQKKYQGI--IPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVR 286 +L++F N+ ++ + P +A ++ P S DD L +W AV Sbjct: 158 HVLKSFRSIYNHARRVHDLPECP-TMAIEWFPE---PASGKIIDD------LDAWKEAVD 207 Query: 287 SLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERI-IPLT----P 341 L N + A+ + LLLTG R E SLRW D++ + + +PLT P Sbjct: 208 GLENDVHRAFYRFLLLTGLRLSEALSLRW-------------DQVHADHLHLPLTKNGRP 254 Query: 342 YVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRS 401 + LL + + + + +RS+ + P + H L E S H RR+ Sbjct: 255 FDLPLL-----AEHHGILQPMQAYRSD-----YVFPGTRHALHLKSPERIAWSAHAHRRT 304 Query: 402 FGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKI 447 F T+A + + +++ H P ++ HY + + LR E++ Sbjct: 305 FATVAAESGLWEETIGRLLNHTPQSVTGAHYVKVGHEQLRAPMEQV 350 >UniRef50_A2BN06 Possible integrase n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BN06_HYPBU Length = 406 Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 54/205 (26%), Positives = 87/205 (42%), Gaps = 30/205 (14%) Query: 224 TAHAYRL-LRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWF 282 T H Y L LR F+ W L D V + ++ + L +E+++ Sbjct: 97 TMHYYTLFLRGFLAW--------------LGLDVKVPVVKKPRGARVE-ALSREEVEKLL 141 Query: 283 SAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEG-ERII---P 338 +A R +P+ + +L TG R +E LR D+DF+ +R++ G ERI+ P Sbjct: 142 AAAR---DPLDLLIVALLFETGLRAQEAVELRLGDIDFQRREIRVRGAKYGEERIVLYGP 198 Query: 339 LTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGL 398 LT Y ++ L D G + K K + R+ + V PH+ L Sbjct: 199 LTEYAMQIWLQLHPDMKPDDKLLGISYSGLYKRLKTLAKRAGLDPRKV---RPHV----L 251 Query: 399 RRSFGTLAEWVEVPTGIVAQIMGHK 423 R +F T A +P V +++GHK Sbjct: 252 RHTFATEALRRGLPLPAVQRLLGHK 276 >UniRef50_A3SHG9 Phage integrase n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SHG9_9RHOB Length = 412 Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 39/162 (24%), Positives = 69/162 (42%), Gaps = 5/162 (3%) Query: 273 LQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKD--K 330 +E + +A ++L + + + + TG R EEI SL+ S+V K + I D Sbjct: 234 FSREDVVKLLAAAKALPDQQLHDLITIGMWTGCRIEEICSLKLSEV--KNDRLLITDAKS 291 Query: 331 IEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAEL 390 G R+IP+ P ++ L L + + G F + R + + + Sbjct: 292 SAGNRVIPIHPQLAPTLQRLRRDSSDGYVLSGLTFNKYGDRSNAVGKRFSRLKTKMGFGG 351 Query: 391 PHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHY 432 ++ H +R++ TL E VP I A I+GH+ + Y Sbjct: 352 SYV-FHSVRKTVATLLENAGVPENIAADILGHEKQTMTYGLY 392 >UniRef50_C9CCW8 Site-specific recombinase n=1 Tax=Enterococcus faecium 1,230,933 RepID=C9CCW8_ENTFC Length = 378 Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 75/172 (43%), Gaps = 28/172 (16%) Query: 299 VLLLTGARREEIASLRWSDVDFKWSSM-------RIKDKIEGE---RIIPLTPYVS---- 344 V L TG R EI +LRW DV F ++ RI+D+ E RI+ TP + Sbjct: 205 VCLFTGLRVGEICALRWEDVSFSDYTIHVHQTLQRIQDRTNSEYKTRIVVTTPKSACSIR 264 Query: 345 ------ELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHN---RALVLAELPHISL 395 L+ +L S G++ ++ ++ +EPR+ N + L + + + Sbjct: 265 TIPVPHGLMTILTAHKASST---GYILTNSDQNP--LEPRTMQNHFKKVLKNSGITSANY 319 Query: 396 HGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKI 447 H LR +F T + +++I+GH + Y +DL R+ +++ Sbjct: 320 HSLRHTFATRCIELGFDVKSLSEILGHASVNITMNRYVHPSMDLKRENMQRL 371 >UniRef50_A5ZEI3 Putative uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZEI3_9BACE Length = 307 Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 20/140 (14%) Query: 301 LLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNS---- 356 L TG R E+ +L+W DVDF ++ ++ + RI +E ++ ++ NS Sbjct: 138 LCTGMRIGEVCALKWEDVDFAQKTVIVQHTVG--RIYNCELKSTERVHSSPKTKNSCREI 195 Query: 357 DVNKEGW----VFRSNSKSGKII-------EPRSAHN---RALVLAELPHISLHGLRRSF 402 ++K+ + + R S+S ++ EPRS + R L ++PH+ HGLR +F Sbjct: 196 PISKQLFQALKMVRKQSQSPYVVGTSIQSKEPRSYRDYFGRLLKRLDIPHLVFHGLRHTF 255 Query: 403 GTLAEWVEVPTGIVAQIMGH 422 T + V+ I+GH Sbjct: 256 ATRCIESQCDYKTVSVILGH 275 >UniRef50_A2RMC8 IntTn5276 protein n=2 Tax=Lactococcus lactis RepID=A2RMC8_LACLM Length = 379 Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 44/183 (24%), Positives = 74/183 (40%), Gaps = 28/183 (15%) Query: 273 LQKEQLKSWFSAVRSLNNPI-ASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKI 331 L KE++ S +S I + ++ + LTG R E AS+R+ D+DFK +RI + Sbjct: 182 LSKEEMSSVLIFCKSYKKDIRYTLAMEFIFLTGCRFGEFASIRYQDIDFKNKLLRIDHTL 241 Query: 332 EGE------------------RIIPLTPYVSELLNVLAQSPNSD----VNKEGWVFRSNS 369 E R I L+ E+++ ++ D VN G +FR Sbjct: 242 EYRVAKYDDRVIQTPKTVGSIRTISLSNRCLEIIDYFQKNCLDDKFVFVNAVGGIFRQ-- 299 Query: 370 KSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAE 429 + N VL +H LR S +L + VP + + +GH+ ++ Sbjct: 300 ---PVFYKFICDNCQKVLGNERKYGIHLLRHSHVSLLVELGVPIKAIMERVGHRDESITL 356 Query: 430 KHY 432 + Y Sbjct: 357 RIY 359 >UniRef50_A9IGA6 Phage-related integrase n=50 Tax=root RepID=A9IGA6_BORPD Length = 657 Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 2/73 (2%) Query: 46 GKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQ 105 GK+ T L+D D +L A +G K+++F+ + GK RM +G + +ARAE + Q Sbjct: 29 GKRYT-LYDNDCLSLMVSA-AGGKSWMFRYSWLGKQKRMALGGYPALSLREARAERDKAQ 86 Query: 106 TLIDTGIDPRIAK 118 LI GIDP+I + Sbjct: 87 ALIARGIDPQIER 99 >UniRef50_B8J6Z7 Integrase family protein n=1 Tax=Anaeromyxobacter dehalogenans 2CP-1 RepID=B8J6Z7_ANAD2 Length = 414 Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 79/166 (47%), Gaps = 16/166 (9%) Query: 296 YLQVLLLTGARREEIASLRWS---DVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQ 352 ++ V + +GARR E+ +LRW +++ W + + R +P+ L LA Sbjct: 191 WIMVAVYSGARRSEVEALRWDTHVNLETGWLVLPGTKTAKARRSVPI-------LQPLAD 243 Query: 353 SPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVP 412 SD +K+G+V + + G+ + AH A + +S + LRR+F + + Sbjct: 244 ELASDPSKKGFVVEAWANVGRDLRIACAH------AGVARVSPNDLRRTFASWMKQQGED 297 Query: 413 TGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWILNEAGIT 458 + +VA+++GH + + + Y R + LR+ K+ + + G T Sbjct: 298 SAVVAKLLGHASTRMVDLVYGRLNDENLRRAVAKLPSVAVPSVGST 343 >UniRef50_B7R6R4 Site-specific recombinase, phage integrase family n=1 Tax=Carboxydibrachium pacificum DSM 12653 RepID=B7R6R4_9THEO Length = 306 Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 62/261 (23%), Positives = 112/261 (42%), Gaps = 50/261 (19%) Query: 199 LPLSELTPDYIAAWLS---TERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGI------IP 249 L + ++ P +I A+LS E +N H R L+AF NY K + I +P Sbjct: 45 LNIEDVRPYHIKAYLSYRKKELKNNAETINHEIRNLKAFF---NYFVKERVINENPVTVP 101 Query: 250 G-------DLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLL 302 + DY++R+M+ +++Q F A R Y+ +L+L Sbjct: 102 VQKTDTKIETFTDYHIRQMLRYYR-------KQKQRGDNFYAYR--------GYIMILIL 146 Query: 303 --TGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELL---NVLAQSPNSD 357 TG R E+ +LRW D+DF + M + K +R IPLT + + L + + Sbjct: 147 LGTGIRLGEMCNLRWKDIDFVNAKMTVIGKGRRQRTIPLTDNLKKELMEWRFYVEKKLGN 206 Query: 358 VNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPH-----ISLHGLRRSFGTLAEWVEVP 412 V ++ +V +++GK + S L ++ + +S H R +F +W+ Sbjct: 207 VTEDSFVIP--TQTGKRMNENSVKTFFQRLKKIMNFRDVRLSPHTFRHTFA--KQWILSG 262 Query: 413 TGIVA--QIMGHKPSALAEKH 431 + + +I+GH + K+ Sbjct: 263 GDVFSLQRILGHSTIEVTNKY 283 >UniRef50_A1ZPB9 Tyrosine recombinase XerD n=4 Tax=Bacteroidetes RepID=A1ZPB9_9SPHI Length = 299 Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 65/261 (24%), Positives = 115/261 (44%), Gaps = 22/261 (8%) Query: 193 LASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRL--LRAFIKWSNYQKKYQGIIPG 250 +A L LP +E+ D+I +LS + ++ A L ++AF K+ ++ + Sbjct: 41 MAGLSILP-AEVKADHIKKFLSYLAKLGIAASSQARILSGIKAFYKYLMLEETIE----- 94 Query: 251 DLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIAS---AYLQVLLLTGARR 307 +D +V P K D L ++++ AV L+ P + A ++VL +G R Sbjct: 95 ---RDPSVNVHTPRIDRKIPDVLSLQEIEDLL-AVIDLSTPEGARNRAMIEVLYSSGLRV 150 Query: 308 EEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDV----NKEGW 363 E+ L+ S++ +RI K ER +P+ + L ++ S+V N E + Sbjct: 151 TELIELKISNLYLDIGFLRIIGKANKERFVPIGREAARYLISYIENIRSNVPVKPNNEDF 210 Query: 364 VF--RSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMG 421 VF R +K +++ AL+ +IS H R SF T V +++G Sbjct: 211 VFLNRRGTKISRVMVFMIIKEVALLADIKKNISPHTFRHSFATHLILGGANIKAVQEMLG 270 Query: 422 HKPSALAEKHYRRRPLDLLRK 442 H+ E Y+R D+LR+ Sbjct: 271 HENITTTEI-YKRLDQDILRQ 290 >UniRef50_B6QXT6 Phage integrase n=2 Tax=Pseudovibrio sp. JE062 RepID=B6QXT6_9RHOB Length = 416 Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 39/137 (28%), Positives = 69/137 (50%), Gaps = 7/137 (5%) Query: 290 NPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNV 349 NP A L++LL TGAR EIA+L+W +DF+ ++ + + ER P S + + Sbjct: 249 NPRALCCLRLLLYTGARLSEIATLKWKHIDFELATFALPSRKGDER--KPHPVSSSAIEI 306 Query: 350 LAQSPNSDVNK---EGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLA 406 L++ P D + G + S ++IE +A R + A +P + +H LR + GT A Sbjct: 307 LSEFPRVDGSPYVLPGCKDPTQPISIEVIE--NAWQRIRIHANIPDVRIHDLRHTVGTFA 364 Query: 407 EWVEVPTGIVAQIMGHK 423 +++ ++ H+ Sbjct: 365 AQAGSNAFLISHLLRHR 381 >UniRef50_D2LLC2 Integrase family protein n=2 Tax=Aciduliprofundum boonei T469 RepID=D2LLC2_9EURY Length = 270 Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 53/230 (23%), Positives = 100/230 (43%), Gaps = 37/230 (16%) Query: 202 SELTP-DYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRK 260 SELTP +++ + S + + + AY L+ F Y+ ++ ++ Sbjct: 47 SELTPREFLLKYYSDKSK---STIRQAYFALKFF---------YRNVLHERFNEE----- 89 Query: 261 MVPVSASKAD--DCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDV 318 +P++ K L ++++K ++ + + L L G R +E+ ++RW DV Sbjct: 90 -IPLAKKKEKLPVVLSRDEVKRMIYGTHNIKHRLV---LMFLYYAGMRLQEVRNIRWEDV 145 Query: 319 DFKWSSMRIK-DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEP 377 +F+ + IK K + ER++ L P + L + + +G+VF S+ GK P Sbjct: 146 EFEREIIHIKVAKGDKERVVFLHPNLKNTLEIYGRKS------KGYVFM--SQRGKKYSP 197 Query: 378 RSAH----NRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHK 423 +S N A +++ H LR SF T + Q++GHK Sbjct: 198 KSIQLIVKNAARRAKINKNVTPHTLRHSFATHLLEGGADIRYIQQLLGHK 247 >UniRef50_B9XSZ3 Integrase family protein n=1 Tax=bacterium Ellin514 RepID=B9XSZ3_9BACT Length = 379 Score = 48.1 bits (113), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 44/153 (28%), Positives = 68/153 (44%), Gaps = 27/153 (17%) Query: 293 ASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIK-DKIEG-----ERIIPLTPYVSEL 346 S ++ L G R+ E A + W D DF + ++ D + G R +P+ P + L Sbjct: 207 CSDLVRFLAFGGFRKSEAAGITWGDCDFAKGEIMVRGDDLTGTKNWETRRVPMIPDMVNL 266 Query: 347 LNVL----AQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSF 402 LN + AQ P ++ K+ E + A + A +P + H LR F Sbjct: 267 LNQMRANRAQEP------------ADKSVMKVRECQKAIDSACKKLVIPRFTHHDLRHLF 314 Query: 403 GT--LAEWVEVPTGIVAQIMGHKP-SALAEKHY 432 T + V++PT VA+ +GHK ALA K Y Sbjct: 315 ATRCIESGVDIPT--VARSLGHKDGGALAMKVY 345 >UniRef50_B2KEQ8 Integrase family protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KEQ8_ELUMP Length = 337 Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 59/250 (23%), Positives = 99/250 (39%), Gaps = 32/250 (12%) Query: 193 LASLLNLPLSELTPDYIAAWLS-TERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIP-- 249 L+ ++ ++++T + I + + T + P+ + L RA I + K Y+G P Sbjct: 89 LSRFGHMKVADITTEDIQKFYNDTWERTSPSTANRHFSLFRAIINKALNLKLYKGQNPCI 148 Query: 250 GDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREE 309 G + Q N + D KE +KS + PI + +LTG R+ E Sbjct: 149 GVVRQRDNPPR---------DKYFTKEDIKSLLVTAENRLKPI----IAFAVLTGCRKME 195 Query: 310 IASLRWSDVDFKWSSMRIKDKIEGE-RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSN 368 I +LRW DVDF +RI G+ R IPL + +L + +P V Sbjct: 196 ILNLRWKDVDFYGGIIRITMSKSGKPREIPLANDLRPILLAMHTNPQDKV---------- 245 Query: 369 SKSGKIIEP--RSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSA 426 I P + + N+ L H R +F +L + + +I+GH Sbjct: 246 ---FNITVPALKYSFNKLLKKLGFEGYCFHTCRHTFASLYMQNDGNITDLQRILGHATIE 302 Query: 427 LAEKHYRRRP 436 L ++ P Sbjct: 303 LTMRYSHFSP 312 >UniRef50_C1XUI9 Site-specific recombinase XerD n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XUI9_9DEIN Length = 385 Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 67/264 (25%), Positives = 106/264 (40%), Gaps = 33/264 (12%) Query: 195 SLLNLPLSELTPDYIAAWLS--TERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDL 252 +L + PL E+ P +I L ++R + TV RL + F + + Y+ P D Sbjct: 106 ALGSRPLQEVKPAHIREVLDGLSKRYSIRTVKMVRQRLWQVFRDALDMELIYRN--PVD- 162 Query: 253 AQDYNVRKMVPVSASKA--DDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEI 310 VR P SKA L+ ++ + SA+ +P + L+++L G RR E Sbjct: 163 ----PVRIKTPRGQSKAKVGRALEPHEIAALLSALDQHKDPRTALALRLMLACGLRRGEA 218 Query: 311 ASLRWSDVDFKWSSMRI-----KDKIEGERIIPLT-------PYVSELLNVLAQSPN--- 355 L+W D+D ++ + D G +P T P L L Q Sbjct: 219 LGLQWQDLDLGAGTLTVTRAWTDDGKRGVLTLPKTHTSGRTVPIPHATLERLQQYRAWYA 278 Query: 356 ---SDVNKEGWVFRSNSKSGKIIEPRS---AHNRALVLAELPHISLHGLRRSFGTLAEWV 409 D E WVF N S K + P + A R + + +H LR S+G+ Sbjct: 279 ERLGDPRPEAWVFPGNDPS-KPLNPHAPNWALKRITERLGIGPLRVHDLRHSYGSHMLAN 337 Query: 410 EVPTGIVAQIMGHKPSALAEKHYR 433 P +V++ MGH + + YR Sbjct: 338 GAPLELVSERMGHANANITLGVYR 361 >UniRef50_A6FWH8 Site-specific recombinase XerD-like protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FWH8_9RHOB Length = 316 Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 60/256 (23%), Positives = 107/256 (41%), Gaps = 36/256 (14%) Query: 194 ASLLNLPLSELTPDYIAAWLSTERQN---RPTVTAHAY---RLLRAFIKWSNY------Q 241 A L + L ELT + W+ + + R T+ H Y R+L W Q Sbjct: 56 AQLGHYHLDELTNPVLDVWVREQVVSGLQRSTINKHIYLMNRMLNLARHWCLVPAQNPDQ 115 Query: 242 KKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLL 301 + + ++ GD Q + L ++++ +A R ++P ++Q+LL Sbjct: 116 QPLKRLVVGDYKQRF----------------LSADEIQRLIAACRRSSHPYLHHFVQILL 159 Query: 302 LTGARREEIASLRWSDVDFK---WSSMRIKDKIEGERIIPLTPYVSEL--LNVLAQSPNS 356 LTGAR+ E + W DVD W+ R K+ RI+ T V + A+ Sbjct: 160 LTGARKGEARTALWRDVDLDKRIWTVPRSKNG-RSRRILLNTNAVDSFNAIRRTAERLQQ 218 Query: 357 DVNKEGWVFRSNSKSGKIIEP-RSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGI 415 +VF +N ++G+ + +A A A+L + +H LR +F +L V Sbjct: 219 PTLPTSFVF-TNPRTGRAYDSFYAAWYVARDQAKLEDVRIHDLRHTFASLLINKGVSLYE 277 Query: 416 VAQIMGHKPSALAEKH 431 V ++GH + +++ Sbjct: 278 VQTLLGHSSVQMTQRY 293 >UniRef50_B5IC76 Site-specific recombinase, phage integrase family protein n=2 Tax=Aciduliprofundum boonei T469 RepID=B5IC76_9EURY Length = 310 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 69/256 (26%), Positives = 110/256 (42%), Gaps = 34/256 (13%) Query: 193 LASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQG----II 248 + + L L L E + D I + R++ TVT L +++K+ N +++G + Sbjct: 40 IETQLELNLDEASVDEITDRIYELRESGKTVTT-----LNSWVKYLNRYLEFRGDEIKLK 94 Query: 249 PGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARRE 308 Q+ ++ VP K D L +W VR N A L +L TG R Sbjct: 95 YFRHTQNDDLYFFVPTDEEK-DSILAV----TW---VRLDVNARNRALLNLLFATGIRIG 146 Query: 309 EIASLRWSDVDFKWSSMRI----KDKIEGERIIPLTPYVSELLNVLAQS--PNSDVNKEG 362 E +L W+D+D S+ I K E +RI+PL P V ++L + NSD N Sbjct: 147 EAIALNWNDIDLTNPSLPILHIRHGKGEKKRIVPLPPKVLKMLIDYKEKYRINSDPNA-- 204 Query: 363 WVFRSNSKSGKIIEP--RSAHNRALVLAELPHISLHGLR--RSFGTLAEWVEVPTGIVAQ 418 +F + G+I P R A LA +P H R R+ L + V + T + + Sbjct: 205 -IF--TTPHGRITHPFARKICKEAGELAGVPQFHAHAARHWRAIAWLKDGVNLET--IRR 259 Query: 419 IMGHKPSALAEKHYRR 434 +GH +++ RR Sbjct: 260 FLGHSSLKTTQRYIRR 275 >UniRef50_D2BJR0 Site-specific recombinase, phage integrase family n=2 Tax=Dehalococcoides RepID=D2BJR0_DEHSV Length = 385 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 64/272 (23%), Positives = 114/272 (41%), Gaps = 42/272 (15%) Query: 195 SLLNLPLSELTPDYIAAW----LSTERQNRPTVTA----HAYRLLRAFIKWSNYQKKYQG 246 +L + L++L P++I A+ LS R + ++A H +R+L + N+ K+ Sbjct: 101 NLGRIELTQLRPEHIQAYYSKALSGGRVSGGGLSAQTVKHHHRVLSEAL---NHAVKW-- 155 Query: 247 IIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAY---LQVLLLT 303 G LA++ + P + + E + F + Y L T Sbjct: 156 ---GLLARNVAMAVDPPRPEKREMHTIAPEDMSVLFEEAAKMEKNSGLPYELIFMTALHT 212 Query: 304 GARREEIASLRWSDVDFKWSSMRIKDKIE----GE------------RIIPLTPYVSELL 347 G RR EI +LRWSD+D S + ++ ++ GE R++ +TP + E L Sbjct: 213 GMRRGEILALRWSDIDLAKSKIYVRCSLQCLKNGEIIIREPKTPGSRRLVSMTPSLLEKL 272 Query: 348 NVLAQSPNSDVNKEGWVFRSNSK-----SGKIIEPRSAHNRALVLAELP--HISLHGLRR 400 + +S ++++ +G + +S G I P + +A+ ++ LH LR Sbjct: 273 IIHKESSSANMILQGKTLQGDSLVFAHFDGTPINPNTVSPAFAKIAKRAGLNLRLHDLRH 332 Query: 401 SFGTLAEWVEVPTGIVAQIMGHKPSALAEKHY 432 S TL V IV++ +GH A Y Sbjct: 333 SHATLMLTAGVHPKIVSERLGHSTVAFTLDTY 364 >UniRef50_Q2W123 Integrase n=1 Tax=Magnetospirillum magneticum AMB-1 RepID=Q2W123_MAGSA Length = 363 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 72/285 (25%), Positives = 113/285 (39%), Gaps = 43/285 (15%) Query: 187 PTSAGPLASLLNLPLSELTPDYIAAWLSTERQNR-----PTVTAHAYRLLRAFIKWSNYQ 241 P LA + L + P + A + R R P + +A LR Sbjct: 91 PAEQMTLADAIRHYLDAVAPTHKGADVEAARLGRFLREEPDLCRYALSNLRTHHIEDYRD 150 Query: 242 KKYQGIIPGDLAQDYN--------VRKMV-----PVSA-------SKADDCLQKEQLKSW 281 ++ + + PG L ++ N VR+ V PVS + D L ++ Sbjct: 151 RRLEAVAPGSLCREINLLHAVLESVRRRVGLVDNPVSHVRRPKVNDERDVRLSLDEEAQL 210 Query: 282 FSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGE-RIIPLT 340 SA+ + NP ++ V L T RR E+ +LRW VD + + + G+ R +PL+ Sbjct: 211 LSALDATRNPWIKPFVIVALETAMRRGEMLALRWEHVDLVQQTAHLPETKNGKGRTVPLS 270 Query: 341 PYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRR 400 + L L +S G VF + S K A RA A L H LH LR Sbjct: 271 SRAVKTLEALPRSIG------GAVFPVSLDSLK-----HAWTRARDRAGLHHFHLHDLRH 319 Query: 401 SFGT-LAE--WVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRK 442 + LAE W + +A + GH+ + +++ R DL +K Sbjct: 320 EATSRLAERGWNILE---LAAVTGHQDLQMLKRYTNLRAADLAKK 361 >UniRef50_C5NYQ3 Tyrosine recombinase XerC n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYQ3_9BACL Length = 348 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 5/134 (3%) Query: 295 AYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSP 354 A L + L +G R E+A+L+ D+DF S + + K + +T + LN S Sbjct: 194 AILTLFLKSGIRVNELANLKVKDIDFLNSEINVIRKGNKVDTVIITKSALDRLNEYITSL 253 Query: 355 NSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISL--HGLRRSFGT-LAEWVEV 411 + +N+E +VF S +K+G + R+ + + ++ + H LR S+GT LA Sbjct: 254 SFKLNREDYVFISKNKTG--LSIRAIQKLVMKYTDTFNVPMSPHKLRHSYGTKLALKTNG 311 Query: 412 PTGIVAQIMGHKPS 425 I+ MGH S Sbjct: 312 NIPIIMTQMGHSNS 325 >UniRef50_C7I5J5 Integrase family protein n=2 Tax=Thiomonas intermedia K12 RepID=C7I5J5_THIIN Length = 401 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 46/161 (28%), Positives = 67/161 (41%), Gaps = 21/161 (13%) Query: 297 LQVLLLTGARREEIASLRWSDVDFK---WSSMRIKDKIEGERIIPLTPYVSELLNVLAQS 353 LQ +LT R + WS++D + W + K + E +PL+ ELL L + Sbjct: 235 LQFTILTALRTGTVIGTPWSEIDLERRLWVIPAERMKAQVEHRVPLSRQAVELLQALPRQ 294 Query: 354 PNSDVNKEGWVFRSNSKSGKIIEPRSAHNRA---LVLAELPHISLHGLRRSFGT-LAEWV 409 SD WVF K + N A L+ P +++HG R SF AE Sbjct: 295 EGSD-----WVFWGARKP-------TISNMAMLELLRGMRPGLTVHGFRSSFSDWAAEST 342 Query: 410 EVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETW 450 P+ V + H + E YRR DL+ K E ++ W Sbjct: 343 HFPSQTVEMALAHMITNQVEAAYRRG--DLIEKRRELMQAW 381 >UniRef50_Q0FPA2 Probable site-specific integrase/recombinase n=2 Tax=Rhodobacterales RepID=Q0FPA2_9RHOB Length = 341 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 67/263 (25%), Positives = 112/263 (42%), Gaps = 30/263 (11%) Query: 201 LSELTPDYIAAWLSTE-RQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVR 259 LS++TP + + R RP LLR+ + + + + +P NVR Sbjct: 99 LSKVTPQVFSRYRDERLRTVRPGTVIRDLGLLRSIFEVA----RLEWDVPLQNNPLANVR 154 Query: 260 KMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVD 319 K P + + L+ +L +A +S N A + + + TG RR EI S+RW DV Sbjct: 155 K--PKAPDPRERRLRPGELDLLLTACQSYRNDWLRAGIVLAIETGMRRGEILSIRWCDVS 212 Query: 320 FKWSSMRIKDKIEGE-RIIPLTPYVSELL-NVLAQSPNSDVNKEGWVFRSNSKSGKIIEP 377 S++ I++ G R IPLT ++L ++L +S V +F ++ + + Sbjct: 213 MDTSTLTIRETKNGHARRIPLTAVAVDVLRDMLEVCDDSSVR----IFPVSANAFRQCWQ 268 Query: 378 RSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGI--VAQIMGHKPSALAEKHYRRR 435 R A ++ + H LR ++ + E+ + VA I GH R Sbjct: 269 RCKGKVAEDYKQIESLRFHDLRHE--AVSRFFEMGLSVPEVALISGH-----------RD 315 Query: 436 PLDLLRKWHEKIETWIL--NEAG 456 P L R H + E +L N+AG Sbjct: 316 PRMLFRYTHLRAENIVLKFNKAG 338 >UniRef50_B5IZ03 Site-specific recombinase, phage integrase family protein n=3 Tax=Rhodobacteraceae RepID=B5IZ03_9RHOB Length = 431 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 57/219 (26%), Positives = 90/219 (41%), Gaps = 31/219 (14%) Query: 247 IIPGDLAQDYNVRKMVPVSASKA--DD--CLQKEQLKSWFSAVRSLNNPIASAYLQVLLL 302 II DL Q NV + + + + A DD + Q+ A S NP+A A L Sbjct: 224 IIENDLDQ-RNVFQGIKIKGTGASKDDRMTMSDSQMAMLLPAYES--NPLAQALFVTLAD 280 Query: 303 TGARREEIASLRWSDVDFKWSSMRIKDK-------IEGERIIPLTPYVSELLNVLAQSPN 355 TGAR EI L D+D + I+ +R IPL+ +E L V Q+ Sbjct: 281 TGARLAEIVGLEARDLDLGGCCLHIRQNGIRRLKTKSSDRSIPLSSRAAEYLKV-HQAGL 339 Query: 356 SDVNKEGWVFRSNSKSGKIIEPR-SAHNRALVLAEL------PHISLHGLRRSFGTLAEW 408 SD +F K PR S A+++ L P +++H LR Sbjct: 340 SDTTP---IF------AKYARPRGSDAASAMLMKRLRTQITDPKVTIHSLRHRMKDKLRN 390 Query: 409 VEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKI 447 P I I+GH +++A + ++++R+ +K+ Sbjct: 391 TGCPEAISLAILGHSSNSVAANYGSGYAMNVMREHLDKV 429 >UniRef50_A8HXQ4 Phage integrase n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8HXQ4_AZOC5 Length = 471 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 40/176 (22%), Positives = 83/176 (47%), Gaps = 20/176 (11%) Query: 276 EQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDV---DFKWSSMRIKDKIE 332 +++++ F S+ + + + L+G R EEIA L +D+ F + + K Sbjct: 282 DEMRALFGGAPSV---LLRDMMAIAALSGMRVEEIARLTVADIFNGCFDITEAKTK---A 335 Query: 333 GERIIPLTPYVSELLN--VLAQSPNSDVNKEGWVFRSNS---KSGKIIEPRSAHNRALVL 387 G R++P+ P + +++ ++P++ + E + + S +S K+++ +A+ R + + Sbjct: 336 GVRMVPIHPALDGIVSRRTKDKAPSAPLFPELPIPKPGSPIERSQKVVKAFTAYRRKIGV 395 Query: 388 AELP------HISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPL 437 ++P + H RR F T AE P + ++GHK S + Y PL Sbjct: 396 DDVPKAARQSRVDFHSFRRWFVTKAEQAHQPVHFIEALVGHKRSGMTLGRYSEGPL 451 >UniRef50_C2MBI5 Site-specific recombinase, phage integrase family/ribosomal subunit interface protein n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2MBI5_9PORP Length = 403 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/129 (27%), Positives = 54/129 (41%), Gaps = 4/129 (3%) Query: 297 LQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNS 356 ++ + TG RR E+ASL+ VD S+R+ K ERI+P + E + + Sbjct: 146 IETIYQTGLRRAEVASLKTQQVDLTAMSLRVVGKGRKERIVPFGTDLREKMQDYITLRDQ 205 Query: 357 DVNKEGWVF---RSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPT 413 V + F SG + + H V+ LP H LR SF T P Sbjct: 206 KVGTSQYFFVTLECRPLSGADVY-QVVHKALSVVPGLPRRGAHTLRHSFATEMLNAGAPI 264 Query: 414 GIVAQIMGH 422 + +++GH Sbjct: 265 TSIKELLGH 273 >UniRef50_Q1NM52 Phage integrase n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NM52_9DELT Length = 406 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 89/397 (22%), Positives = 157/397 (39%), Gaps = 70/397 (17%) Query: 40 RFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARA 99 RF L +GK L SG ++++ + + GK R+T+G D + AR Sbjct: 17 RFELTDGKGLVLLV----------LPSGRRSWLLRYQFEGKPRRITLGEYPDMSLLQARN 66 Query: 100 EARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTK 159 + +++I G+DP A+K E ++ S + W+ EL+ S K + Sbjct: 67 ASEATRSIIKQGLDP----ALKRTEEKTAHKTSPTVSDLLTEYWD---MELKESPSGKER 119 Query: 160 RPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQN 219 R R + + L ++E+T A L T R Sbjct: 120 R----RLVEKDV---------------------LPPWGKRKVAEITRRDAALLLDTVRAR 154 Query: 220 RPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLK 279 P VT + RL ++ N+ + +G++ +K P S AD +++K Sbjct: 155 AP-VTGN--RLQGVLVRMFNFAAE-RGVLEHSPLMGLRKKKEQPRSRVLAD-----KEIK 205 Query: 280 SWFSAVRSLNNPIASAY------LQVLLLTGARREEIASLRWSDVDFK-WS--SMRIKDK 330 + A+ +L+N Y L+++LLTG R E+ + W ++D W+ + R+K K Sbjct: 206 LLWDAL-ALDNTAMDIYRVSKLALKMILLTGQRPGEVCGMTWDEIDGDTWNIPAERMKSK 264 Query: 331 IEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRAL----V 386 E + P S L ++ Q+ +VF+S+ I P S L Sbjct: 265 -EPHNV----PLGSMALEIIEQARRYSPRGSTFVFKSSHFKEGPITPHSLSKAILRHWQE 319 Query: 387 LAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHK 423 + + H LRR+ T + V + +++GHK Sbjct: 320 MGVTERFTPHDLRRTLRTRLAEIGVDDVVGERVLGHK 356 >UniRef50_Q2VZX9 Integrase n=1 Tax=Magnetospirillum magneticum AMB-1 RepID=Q2VZX9_MAGSA Length = 381 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 1/87 (1%) Query: 32 KFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQ-SVYAGKTLRMTIGNIN 90 K + +L+ T+PEGK ++WD + AK F+ Q + AG+ R IG + Sbjct: 4 KLSAAKLKTLTVPEGKSGEYVWDTSLPGFGVYVGKTAKTFLVQFTTRAGEEKRHKIGRSD 63 Query: 91 DWKIDDARAEARRLQTLIDTGIDPRIA 117 D AR EA R+ + G DP A Sbjct: 64 VLSYDAARQEALRVLGEVQKGADPTAA 90 >UniRef50_Q6AMU1 Related to integrase/recombinase n=1 Tax=Desulfotalea psychrophila RepID=Q6AMU1_DESPS Length = 357 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 23/161 (14%) Query: 286 RSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEG-ERIIPLTPYVS 344 +++ NP ++ +L+ TG R E+A LR D++F+ S+RI + G R +PLT + Sbjct: 185 KNIRNPKFYPFVLLLMHTGMRSSEVARLRPEDINFETLSLRIHETKSGIPRSVPLTTKAA 244 Query: 345 ELLNVLAQSPNSDVNKEGWVF-RSNSKSGKIIEPRSAHNRALVLA-------------EL 390 E+L + SP + G+ F + N + K I R A +A ++ Sbjct: 245 EVLQTV--SPEAT----GYYFLKENHLNQKDI--RLAPAKAFSSCWRSLRKKMEASGHKI 296 Query: 391 PHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKH 431 PH H LR + + V VA I+GH A+ ++ Sbjct: 297 PHFRPHDLRHTAASHLLMAGVDIREVADILGHSTLAMTMRY 337 >UniRef50_D2L701 Integrase family protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L701_9DELT Length = 355 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 41/151 (27%), Positives = 67/151 (44%), Gaps = 11/151 (7%) Query: 293 ASAYLQVLLLT----GARREEIASLRWSDVDFKWSSMRI--KDKIEGERIIPLTPYVSEL 346 A+ +VLLL+ AR+ E+ L W+DVDF S +R+ + + +G P V EL Sbjct: 172 ATGQDRVLLLSMLYLAARKGEVYRLTWADVDFSRSQVRLTTRKRQDGSMEEEWVPMVGEL 231 Query: 347 LNVLAQSPNSDVNKEGWVFRS--NSKSGK-IIEPRSAHNRALVLAELPHISLHGLRRSFG 403 +VL + V + WVF GK E R ++ H +R Sbjct: 232 YDVLL--AHRQVARNEWVFTQTVGRHDGKPYTENRGFPQELCREVKVKPFGCHAIRHLTA 289 Query: 404 TLAEWVEVPTGIVAQIMGHKPSALAEKHYRR 434 ++ +VP ++ I+ HK + E++ RR Sbjct: 290 SILARADVPMVVIQGILRHKKLSTTERYVRR 320 >UniRef50_Q854V7 Gp41 n=1 Tax=Mycobacterium phage Che9c RepID=Q854V7_9CAUD Length = 400 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 42/156 (26%), Positives = 66/156 (42%), Gaps = 23/156 (14%) Query: 300 LLLTGARREEIASLRWSDVDFKWSSM--------RIKDKIE-------GERIIPLTPYVS 344 L L G R EI+ LRW DVD ++ R K +IE R +PL + Sbjct: 218 LALAGFRLAEISGLRWCDVDLDARTVTVQNTRLQRGKKRIEKTPKSRASRRELPLPDDLF 277 Query: 345 ELLNVLAQSPNSDVNKEGWVFRSN-----SKSGKIIEPRSAHNR---ALVLAELPHISLH 396 + +D + G + ++ +++G + P + NR L A L H+ LH Sbjct: 278 AAFKAARKIQAADQLRLGEAYEASGYVVVNEAGTPLTPNAIENRWARVLKAAGLRHVRLH 337 Query: 397 GLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHY 432 R + GTL VPT +++ +GH A + Y Sbjct: 338 DARHTCGTLMHLRGVPTALISAWLGHASKAFTLQTY 373 >UniRef50_C3XFN5 Phage integrase n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XFN5_9HELI Length = 370 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 21/152 (13%) Query: 296 YLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIE-------------GERIIPLTPY 342 Y Q+ LLTG R EI +L++SD++ + +++++ ++ G+R I + P+ Sbjct: 203 YFQLALLTGMRVNEILALKYSDINVEKNTIQVYKSLQQGTNTISTTKTENGKRNIQILPF 262 Query: 343 VSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELP--HISLHGLRR 400 + LL D N G++F N + G I + +L EL +L+ R Sbjct: 263 LKSLL-----KDTLDTNGSGYIF-LNKRGGFISDSTMRKYFKKILQELNIGDRTLYSTRH 316 Query: 401 SFGTLAEWVEVPTGIVAQIMGHKPSALAEKHY 432 +F ++ V++++GHK A Y Sbjct: 317 TFASIMIAYGEDIAWVSKMLGHKDIATTCNFY 348 >UniRef50_D1PRY2 Site-specific recombinase, phage integrase family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRY2_9FIRM Length = 391 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 48/161 (29%), Positives = 82/161 (50%), Gaps = 35/161 (21%) Query: 296 YLQVLLLTGARREEIASLRWSDVDFKWSSMRIKD---KIEGERIIPLTP---------YV 343 Y +++L TG RR E LRWSD+D++ ++ ++ K+ G++I P Y+ Sbjct: 208 YFKLVLATGMRRGEACGLRWSDIDWRHRTIHVQRTVVKLSGQKIFTKEPKTASGNRRVYI 267 Query: 344 S-ELLNVL-----------AQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNR-ALVLAE- 389 S E+ +L Q+ + +E ++FR SG + P + R +L E Sbjct: 268 SKEMCKLLKAWKQECAWQMEQAEGQTLTEEDYLFR--QPSGDPMVPTTFTFRFKKILKEN 325 Query: 390 -LP-HISLHGLRRSFGTL--AEWVEVPTGIVAQIMGH-KPS 425 LP ++S+H LR + +L A+ V+V T VA ++GH +PS Sbjct: 326 GLPQNLSVHSLRHTNASLLIAQGVDVRT--VAGLLGHSQPS 364 >UniRef50_C6MS46 Integrase family protein n=1 Tax=Geobacter sp. M18 RepID=C6MS46_9DELT Length = 356 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 45/151 (29%), Positives = 68/151 (45%), Gaps = 7/151 (4%) Query: 283 SAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPY 342 +A RS NN + L + L TG R EI +L+W D+D K + + D GER P Sbjct: 187 AAKRSCNNCLYPVVL-LALSTGMRFSEIMNLKWKDIDLKRKCLILHDTKNGER--RNVPV 243 Query: 343 VSELLNVLAQSPNSDVNKEG--WVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRR 400 V+ +VL + S V + G VF S S R + A+ A L H LR Sbjct: 244 VNLAHSVLTE--RSKVRRLGTELVFPSISDPTMPSNLRKSWAAAVRDANLEDFRFHDLRH 301 Query: 401 SFGTLAEWVEVPTGIVAQIMGHKPSALAEKH 431 S + +A+++GHK A+ +++ Sbjct: 302 SAASYLAMNGATLAEIAEVLGHKTLAMVKRY 332 >UniRef50_UPI0001BC31E8 phage integrase family protein n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC31E8 Length = 349 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 11/156 (7%) Query: 284 AVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYV 343 A+RS N +A + +L TG R E+ + +D+D++ +S++I K E I+ + Sbjct: 176 AIRS--NLRDTAIIALLGGTGIRVSELVGIDLNDIDWEHNSIKIVRKGGNEDIVYFGEEI 233 Query: 344 SELL-NVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHN--RALVLAELP--HISLHGL 398 S+ + + + KE +F ++ K + RS A +P IS HGL Sbjct: 234 SKYMADYIDNERKPGDKKENALFVASRGEKKRLTVRSVERIVSKYSAASIPSKKISPHGL 293 Query: 399 RRSFGTLAEWVEVPTGI--VAQIMGHKPSALAEKHY 432 RR+FGT + E + + VA +GHK + + HY Sbjct: 294 RRTFGT--NYYEATSDLYAVADALGHKNIQVTKDHY 327 >UniRef50_Q314D3 Integrase/recombinase n=5 Tax=Deltaproteobacteria RepID=Q314D3_DESDG Length = 304 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 58/234 (24%), Positives = 107/234 (45%), Gaps = 37/234 (15%) Query: 209 IAAWLSTERQNRPTVTAHAYRL---LRAFIKWSNYQKKYQGIIPGDLAQDYNVRKM---V 262 +A TE P A +R+ +RAF W++ G++ + A+ + ++ + Sbjct: 66 FSAGAVTESGRGPRSAASLHRMKAAVRAFFAWASEA----GVVDDNPARSIRMHRLPRKL 121 Query: 263 PVSASKADD--CLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDF 320 PV + A+ L++ + ++ FSA+R A ++VLL TG R E+A+L D+D Sbjct: 122 PVFLTTAEKKRLLKELKGRTDFSALRD------RAMIEVLLGTGIRLGELAALDMDDIDL 175 Query: 321 KWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEG-----WVFRSNSKSGKI- 374 +R++ K +P ++ L L + ++ + G +F SN + G++ Sbjct: 176 DAKHLRVRAKGN----VPQVKFIKTDLRTLLRRYLAERRRHGRPEMEALFLSN-RDGRLC 230 Query: 375 ---IEPRSAH--NRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHK 423 I R AH +A + EL + HGLR +F T +V + +GH+ Sbjct: 231 QRQIANRLAHWLRKAGIEKEL---TPHGLRHTFATHLYGATNDLLVVQRALGHR 281 >UniRef50_Q03GP3 Integrase n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03GP3_PEDPA Length = 384 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 50/226 (22%), Positives = 90/226 (39%), Gaps = 39/226 (17%) Query: 232 RAFIKWSNY---------QKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWF 282 +++ KW NY + +Y G P L V++ + K ++ +++L ++F Sbjct: 129 KSYKKWLNYASMIFDYALRAEYVGRNPCTLVTMPRVQEQ---AGEKLENFWTRDELNTFF 185 Query: 283 SAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIE---------- 332 V + +VL +G R+ E+ +L W D++F+ +++R+ + Sbjct: 186 DYVTPERDVEQFTMFRVLAYSGIRKGELLALTWKDINFEDNTLRVNKTLTQGLGGKLIVQ 245 Query: 333 ------GERIIPLTPYVSELL---------NVLAQSPNSDVNKEGWVFRSNSKSGKIIE- 376 G R I L L L N++ N + VF SN + + Sbjct: 246 PPKSRAGRRTIDLDDSTMRYLRQWKGVQRETFLGMGFNTN-NVDQLVFASNRNHFRSMNT 304 Query: 377 PRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGH 422 P N+A+ L HIS+HG R + +L V Q +GH Sbjct: 305 PTKWLNKAIKATGLKHISIHGFRHTHASLLYQSGVGLKETQQRLGH 350 >UniRef50_B0VFS7 Site-specific recombinase, phage integrase family n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFS7_9BACT Length = 298 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 43/164 (26%), Positives = 73/164 (44%), Gaps = 20/164 (12%) Query: 272 CLQKEQLKSWFSAVRSLNNPIA---SAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIK 328 C +E++++ S + ++P A L+ L +G R E+A +R D+D K +R+ Sbjct: 112 CFTEEEVRTLLS-IPDTDSPFGIRNKAILETLYSSGLRISELAGIRLQDIDLKRGLVRVT 170 Query: 329 DKIEGERIIPLTPYVSELLN---------VLAQSPN-SDVNKEGWVFRSNSKSGKIIEPR 378 K +RI+PL Y E +N + SP+ + K G F ++K II R Sbjct: 171 GKGNKQRIVPLGSYAIEAINNYLKVRPQFMRENSPDLLFLTKSGKAF--DTKQLDIILKR 228 Query: 379 SAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGH 422 ++A+ S H LR SF T + +++GH Sbjct: 229 YFE----LVAKAKGYSPHSLRHSFATHLLSRGADLRAIQELLGH 268 >UniRef50_Q2LV83 Phage integrase family protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LV83_SYNAS Length = 364 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 14/150 (9%) Query: 263 PVSASKADDCLQKEQLKSWFSAVRSLNNPIAS-AYLQVLLL----TGARREEIASLRWSD 317 PVS K D K ++ W ++ N S +LQ +++ TG R+ EI L+WS Sbjct: 150 PVSKVKKDRVTNK--IERWLTSEEETNLLKESPKWLQDIIIFAIHTGLRQSEILDLKWSQ 207 Query: 318 VDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRS---NSKSGKI 374 VD K ++ I + + R I P + VL N ++ EG+VF + + K ++ Sbjct: 208 VDMKRRTVTIHE--QKNRCIDTLPLNETAMTVLKNRHNPELPLEGYVFPNTLGDRKGNRL 265 Query: 375 IEPRSAHNRALVLAELPHISLHGLRRSFGT 404 + A AL A + + H LR +F T Sbjct: 266 L--LKAFYVALKKANISNFRFHDLRHTFAT 293 >UniRef50_A4FXL1 Phage integrase family protein n=2 Tax=Methanococcus RepID=A4FXL1_METM5 Length = 333 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 58/229 (25%), Positives = 98/229 (42%), Gaps = 43/229 (18%) Query: 234 FIKWSNYQKKYQGIIPGDLAQDYNVRK----MVPVSASKA--DDCLQKEQL--KSWFSAV 285 F ++ Y +K +G L + YN+ K + +A ++C++++ KS + Sbjct: 78 FKRFFVYLEKKRGCTHQTLVRYYNLLKVFYRLFKFTAFNEFNNECIERKTFSKKSKTRSY 137 Query: 286 RSLNNPIASAYLQ------------------VLLLTGARREEIASLRWSDVDFKWSSMRI 327 +NN I L VL TG RR E+ ++++D DFK +R+ Sbjct: 138 DDVNNEIMDKVLDEILDGNSATKNRDGLMMLVLWETGCRRSEVIRIKYNDFDFKTGQIRL 197 Query: 328 KDKIEGE-RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSN-SKSGKIIEP-------R 378 D GE R + ++ + L+ + S N E ++F+S K GK ++P R Sbjct: 198 TDTKNGEDRYVVVSKKTTNLIREYS-SENILKGPENFIFQSEKGKLGKQVKPGHLSEVFR 256 Query: 379 SAHNRALVLAELP---HISLHGLR--RSFGTLAEWVEVPTGIVAQIMGH 422 A + + E+ LH LR R+ L E V IV +I+GH Sbjct: 257 RAIDNLISKGEIEAGKRYVLHSLRHGRAVALLDEGTSVE--IVKEILGH 303 >UniRef50_A6CQV2 Integrase-recombinase protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CQV2_9BACI Length = 279 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 16/168 (9%) Query: 271 DCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDK 330 +CL Q + V+ N +A + LL TG R E+ +L SD+D + ++ Sbjct: 107 ECLNGSQCATLLKKVKEEGNDRNTAIVYTLLHTGIRVSELCALNQSDIDLDKGRLEVRTS 166 Query: 331 IEGERIIPLTPYVSELLNV-LAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRAL--VL 387 R IPL+ L LA SP D +V R+N + RA+ +L Sbjct: 167 TGHPRTIPLSVEAKYYLECHLATSPVKDA---VFVSRANER---------LTERAIQYIL 214 Query: 388 AELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRR 435 + ++ H LR +F V IV+++ GHK + +++ + R Sbjct: 215 KKFD-VNPHKLRHTFCQQLVDKGVSIEIVSRLAGHKDINVTKRYAKSR 261 >UniRef50_C9LR41 Toxin-antitoxin system, toxin component, PIN family n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR41_9FIRM Length = 375 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 38/162 (23%), Positives = 72/162 (44%), Gaps = 30/162 (18%) Query: 299 VLLLTGARREEIASLRWSDVDFKWSSMRIKDKI----EGERIIPLTPYV----------S 344 +LL TG R E+ +L WSD+D+K + + I + G+ II TP + Sbjct: 196 LLLATGMRAGELGALYWSDIDYKNNVIHITKTVTVNQNGKSIIGTTPKTQKSKRDIPLNA 255 Query: 345 ELLNVLAQSPN--------SDVNKEGWVFRSNSKSGKIIEPRSAHN------RALVLAEL 390 E+ N+L++ N + VF N++ I+ ++ +N + + E+ Sbjct: 256 EIRNILSKQRNFISMWTAERIIKLNDTVF--NAEMQGIVYAKTINNSIKRILKRIEEIEI 313 Query: 391 PHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHY 432 + H R +F ++A +P ++ +IMGH ++ Y Sbjct: 314 KPFTAHAFRSTFASMAVKKGMPLNVLKEIMGHASYSMTADLY 355 >UniRef50_C0XAL7 Possible bacteriophage integrase n=6 Tax=Lactobacillus RepID=C0XAL7_9LACO Length = 394 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 48/218 (22%), Positives = 92/218 (42%), Gaps = 42/218 (19%) Query: 246 GIIPGDLAQDYNVRKMVPVSASKA-----DDCLQKEQLKSWFSAVRSLNNPIASAYLQVL 300 G+ G +A + R ++P ++ + KE+L ++ + +N + AY ++L Sbjct: 148 GMRLGYVADNELSRIIIPKKTTRKRRDTEHNFYSKEELDTFLEVAKEVNIRVY-AYFKLL 206 Query: 301 LLTGARREEIASLRWSDVDFKWSSMRIKDKI----------------EGERIIPLTPYVS 344 TG R+ E +L W D+D +++ + I + +RI+PL+ + Sbjct: 207 SSTGLRKGEALALTWKDIDLINNTISVNKTISFGIGNKQVVNTPKTKQSKRIVPLSANLK 266 Query: 345 ELL---------------NVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRA----L 385 ++L + +A + S W+ +K KI E + N+ + Sbjct: 267 QVLLDYRKSEKILSDKLFHTIAGNYVSLSKPTQWLSEVYAKDHKINEKFAKENKLDENYV 326 Query: 386 VLAELPHISLHGLRRSFGT-LAEWVEVPTGIVAQIMGH 422 + +L HI+LH R +F T L E V V ++GH Sbjct: 327 LNKDLRHITLHRFRHTFTTLLIENTNVKPKTVQMLLGH 364 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P71298 Putative prophage CP4-6 integrase n=7 Tax=Proteo... 618 e-175 UniRef50_B7D090 Phage integrase family protein n=1 Tax=Burkholde... 400 e-110 UniRef50_A4LPJ2 Phage integrase n=2 Tax=Burkholderia pseudomalle... 394 e-108 UniRef50_Q2SV18 Phage integrase n=20 Tax=Betaproteobacteria RepI... 381 e-104 UniRef50_Q82XM2 Phage integrase n=1 Tax=Nitrosomonas europaea Re... 366 1e-99 UniRef50_C6MHB2 Integrase family protein n=1 Tax=Nitrosomonas sp... 365 2e-99 UniRef50_Q6ARX0 Related to integrase n=5 Tax=Proteobacteria RepI... 362 1e-98 UniRef50_A1WB37 Phage integrase family protein n=5 Tax=Burkholde... 359 1e-97 UniRef50_D0S9N1 Phage integrase n=1 Tax=Acinetobacter johnsonii ... 335 2e-90 UniRef50_Q12DC0 Phage integrase n=1 Tax=Polaromonas sp. JS666 Re... 327 4e-88 UniRef50_C6MJ55 Integrase family protein n=2 Tax=Betaproteobacte... 292 1e-77 UniRef50_Q3J8Z8 Phage integrase n=2 Tax=Nitrosococcus oceani Rep... 290 9e-77 UniRef50_C6RMM9 Integrase n=1 Tax=Acinetobacter radioresistens S... 281 4e-74 UniRef50_C6BFQ2 Integrase family protein n=4 Tax=Betaproteobacte... 275 3e-72 UniRef50_B9ZR50 Integrase family protein n=2 Tax=Gammaproteobact... 267 6e-70 UniRef50_Q5P855 Phage integrase n=5 Tax=Proteobacteria RepID=Q5P... 264 6e-69 UniRef50_Q5ZWK0 Phage related integrase n=15 Tax=Proteobacteria ... 264 6e-69 UniRef50_B7S183 Site-specific recombinase, phage integrase famil... 260 1e-67 UniRef50_Q5P749 Similar to phage-related integrase n=3 Tax=Bacte... 256 1e-66 UniRef50_B3T0I4 Putative Phage integrase family protein n=2 Tax=... 255 2e-66 UniRef50_C1SPM2 Site-specific recombinase XerD n=1 Tax=Denitrovi... 255 4e-66 UniRef50_UPI00003841F3 COG0582: Integrase n=1 Tax=Magnetospirill... 254 5e-66 UniRef50_C0GWH6 Integrase family protein n=3 Tax=Desulfonatronos... 252 2e-65 UniRef50_D2LJU9 Integrase family protein n=1 Tax=Rhodomicrobium ... 248 2e-64 UniRef50_Q129B4 Phage integrase n=1 Tax=Polaromonas sp. JS666 Re... 248 4e-64 UniRef50_A5CCP8 Phage-related integrase n=25 Tax=Orientia tsutsu... 248 5e-64 UniRef50_A1AUY6 Phage integrase family protein n=2 Tax=Desulfuro... 248 5e-64 UniRef50_B5K270 Integrase n=1 Tax=Octadecabacter antarcticus 238... 248 5e-64 UniRef50_A1B6Q9 Phage integrase family protein n=1 Tax=Paracoccu... 246 2e-63 UniRef50_C5SDM2 Integrase family protein n=1 Tax=Allochromatium ... 245 3e-63 UniRef50_B5EC35 Integrase family protein n=1 Tax=Geobacter bemid... 243 1e-62 UniRef50_C6XR20 Integrase family protein n=1 Tax=Hirschia baltic... 242 2e-62 UniRef50_A3V904 Phage integrase n=5 Tax=Rhodobacteraceae RepID=A... 241 3e-62 UniRef50_A1AQX4 Phage integrase family protein n=1 Tax=Pelobacte... 241 5e-62 UniRef50_Q7WFY2 Phage-related integrase n=1 Tax=Bordetella bronc... 238 3e-61 UniRef50_Q3SUE5 Phage integrase n=6 Tax=Alphaproteobacteria RepI... 238 3e-61 UniRef50_Q1RJE3 Integrase n=9 Tax=Rickettsia RepID=Q1RJE3_RICBR 238 4e-61 UniRef50_A4VJM8 Integrase n=2 Tax=Gammaproteobacteria RepID=A4VJ... 237 6e-61 UniRef50_A6X736 Phage integrase family protein n=1 Tax=Ochrobact... 236 1e-60 UniRef50_B3E293 Integrase family protein n=1 Tax=Geobacter lovle... 236 2e-60 UniRef50_A4TWM2 Phage integrase n=1 Tax=Magnetospirillum gryphis... 235 3e-60 UniRef50_B3CTI8 Putative integrase n=7 Tax=Orientia tsutsugamush... 234 5e-60 UniRef50_A1WTV4 Phage integrase family protein n=1 Tax=Halorhodo... 231 3e-59 UniRef50_Q1NSR7 Phage integrase n=1 Tax=delta proteobacterium ML... 230 8e-59 UniRef50_A5FXQ0 Phage integrase family protein n=1 Tax=Acidiphil... 229 2e-58 UniRef50_B2HWC8 Integrase n=6 Tax=Acinetobacter RepID=B2HWC8_ACIBC 227 6e-58 UniRef50_C6I0A6 Phage integrase family protein n=1 Tax=Leptospir... 225 3e-57 UniRef50_Q2NBN0 Site-specific recombinase, phage integrase famil... 222 2e-56 UniRef50_Q2VZX9 Integrase n=1 Tax=Magnetospirillum magneticum AM... 222 2e-56 UniRef50_B8ERI0 Integrase family protein n=1 Tax=Methylocella si... 222 3e-56 UniRef50_B5J7N6 Site-specific recombinase, phage integrase famil... 221 3e-56 UniRef50_Q2NBN1 Site-specific recombinase, phage integrase famil... 221 6e-56 UniRef50_A7ICY0 Integrase family protein n=14 Tax=Alphaproteobac... 218 3e-55 UniRef50_B9Z851 Integrase family protein n=1 Tax=Lutiella nitrof... 218 3e-55 UniRef50_Q5LLE0 Site-specific recombinase, phage integrase famil... 218 4e-55 UniRef50_B1JLZ5 Integrase family protein n=3 Tax=Gammaproteobact... 217 9e-55 UniRef50_B7RVJ7 Site-specific recombinase, phage integrase famil... 217 9e-55 UniRef50_B6R5P1 Phage integrase n=1 Tax=Pseudovibrio sp. JE062 R... 217 9e-55 UniRef50_B5KC37 Putative phage-related integrase n=1 Tax=Octadec... 216 2e-54 UniRef50_A4SIA1 Phage integrase family protein n=2 Tax=Gammaprot... 215 4e-54 UniRef50_A4Y8Q0 Phage integrase family protein n=2 Tax=Shewanell... 213 2e-53 UniRef50_C7JF17 Phage DNA recombinase n=8 Tax=Acetobacter pasteu... 211 6e-53 UniRef50_Q1K3L6 Phage integrase n=1 Tax=Desulfuromonas acetoxida... 210 7e-53 UniRef50_A8TPU7 Phage integrase n=1 Tax=alpha proteobacterium BA... 210 9e-53 UniRef50_B5K290 Phage integrase n=2 Tax=Octadecabacter antarctic... 210 9e-53 UniRef50_B4WEQ1 Site-specific recombinase, phage integrase famil... 208 5e-52 UniRef50_B7H3T9 Phage integrase family protein n=9 Tax=Acinetoba... 208 5e-52 UniRef50_A3UTJ0 Site-specific recombinase XerD-like n=1 Tax=Vibr... 208 5e-52 UniRef50_Q1NM52 Phage integrase n=1 Tax=delta proteobacterium ML... 207 7e-52 UniRef50_A3D8Y2 Phage integrase family protein n=4 Tax=Shewanell... 206 1e-51 UniRef50_A3VQY7 Phage integrase n=1 Tax=Parvularcula bermudensis... 204 7e-51 UniRef50_A3WST9 Probable integrase protein n=2 Tax=Bradyrhizobia... 203 1e-50 UniRef50_A5EBE3 Putative phage related integrase n=1 Tax=Bradyrh... 203 1e-50 UniRef50_A5WEX8 Phage integrase family protein n=2 Tax=Psychroba... 203 2e-50 UniRef50_Q2GBL9 Phage integrase n=3 Tax=cellular organisms RepID... 201 5e-50 UniRef50_Q1VBR2 Site-specific recombinase XerD-like protein n=1 ... 201 6e-50 UniRef50_C6KUG0 Tyrosine recombinase n=1 Tax=uncultured bacteriu... 200 9e-50 UniRef50_Q5LU39 Site-specific recombinase, phage integrase famil... 200 1e-49 UniRef50_B9JF62 Tyrosine site-specific integrase/recombinase pro... 198 3e-49 UniRef50_B0TQV5 Integrase family protein n=1 Tax=Shewanella hali... 198 5e-49 UniRef50_A9W3V7 Integrase family protein n=1 Tax=Methylobacteriu... 197 6e-49 UniRef50_Q1K3L0 Phage integrase n=1 Tax=Desulfuromonas acetoxida... 196 1e-48 UniRef50_Q2GBS0 Phage integrase n=2 Tax=Sphingomonadaceae RepID=... 195 3e-48 UniRef50_Q89GJ7 Blr6348 protein n=1 Tax=Bradyrhizobium japonicum... 195 3e-48 UniRef50_B6QXT6 Phage integrase n=2 Tax=Pseudovibrio sp. JE062 R... 194 7e-48 UniRef50_Q6LTT6 Hypothetical integrase n=1 Tax=Photobacterium pr... 193 1e-47 UniRef50_Q0TL05 Phage integrase n=6 Tax=Escherichia coli RepID=Q... 193 1e-47 UniRef50_B5J4F2 Site-specific recombinase, phage integrase famil... 192 2e-47 UniRef50_A5G0X2 Phage integrase family protein n=1 Tax=Acidiphil... 192 3e-47 UniRef50_D2LD60 Integrase family protein n=1 Tax=Rhodomicrobium ... 191 4e-47 UniRef50_C4SWJ3 Phage integrase n=7 Tax=Gammaproteobacteria RepI... 191 5e-47 UniRef50_A3V8A4 Possible phage-related integrase n=2 Tax=Rhodoba... 190 8e-47 UniRef50_UPI0000383FB1 COG0582: Integrase n=1 Tax=Magnetospirill... 189 2e-46 UniRef50_Q483M1 Site-specific recombinase, phage integrase famil... 188 4e-46 UniRef50_A1TXN0 Phage integrase family protein n=1 Tax=Marinobac... 188 6e-46 UniRef50_B5J7V0 Site-specific recombinase, phage integrase famil... 188 6e-46 UniRef50_Q5P4X3 Phage-related integrase n=2 Tax=Betaproteobacter... 187 6e-46 UniRef50_A3VLD9 Phage integrase n=1 Tax=Rhodobacterales bacteriu... 186 1e-45 UniRef50_A5F3U5 Site-specific recombinase, phage integrase famil... 186 2e-45 UniRef50_B0KFC6 Integrase family protein n=5 Tax=Pseudomonas put... 184 5e-45 UniRef50_B8J4X3 Integrase family protein n=1 Tax=Desulfovibrio d... 183 1e-44 UniRef50_Q6ALK6 Related to integrase n=1 Tax=Desulfotalea psychr... 183 1e-44 UniRef50_A3WZM1 Possible phage-related integrase n=1 Tax=Nitroba... 183 2e-44 UniRef50_Q2RHJ2 Phage integrase n=3 Tax=Firmicutes RepID=Q2RHJ2_... 177 8e-43 UniRef50_B5S678 Integrase protein n=1 Tax=Ralstonia solanacearum... 176 2e-42 UniRef50_Q2SP99 Integrase n=2 Tax=Gammaproteobacteria RepID=Q2SP... 176 2e-42 UniRef50_B4BIA4 Integrase family protein n=2 Tax=Geobacillus Rep... 176 2e-42 UniRef50_B0T7J1 Integrase family protein n=4 Tax=Alphaproteobact... 174 6e-42 UniRef50_A0LQG0 Phage integrase family protein n=2 Tax=Deltaprot... 174 7e-42 UniRef50_C6HW36 Putative phage integrase n=1 Tax=Leptospirillum ... 173 1e-41 UniRef50_A1VGL4 Phage integrase family protein n=1 Tax=Desulfovi... 173 2e-41 UniRef50_A6Q4N1 Site-specific recombinase, phage integrase famil... 173 2e-41 UniRef50_D2LKM4 Integrase family protein n=1 Tax=Rhodomicrobium ... 172 3e-41 UniRef50_Q1R2C9 Integrase-like protein n=9 Tax=root RepID=Q1R2C9... 170 1e-40 UniRef50_A1AN30 Phage integrase family protein n=1 Tax=Pelobacte... 170 1e-40 UniRef50_C5DAW2 Integrase family protein n=7 Tax=Bacillaceae Rep... 169 3e-40 UniRef50_C7LSP4 Integrase family protein n=1 Tax=Desulfomicrobiu... 169 3e-40 UniRef50_B9MQ70 Integrase family protein n=1 Tax=Anaerocellum th... 167 7e-40 UniRef50_C5SDU6 Integrase family protein n=1 Tax=Allochromatium ... 167 1e-39 UniRef50_B1I2A9 Phage integrase family protein n=1 Tax=Candidatu... 166 1e-39 UniRef50_C9RBE5 Integrase family protein n=1 Tax=Ammonifex degen... 166 1e-39 UniRef50_A1V9J7 Phage integrase family protein n=1 Tax=Desulfovi... 165 3e-39 UniRef50_A6FWH8 Site-specific recombinase XerD-like protein n=1 ... 165 3e-39 UniRef50_C6MS46 Integrase family protein n=1 Tax=Geobacter sp. M... 165 3e-39 UniRef50_A0LL76 Phage integrase family protein n=1 Tax=Syntropho... 165 4e-39 UniRef50_D2L4K8 Integrase family protein n=1 Tax=Desulfovibrio s... 164 5e-39 UniRef50_A1SRZ5 Phage integrase family protein n=1 Tax=Psychromo... 164 7e-39 UniRef50_Q5X3B3 Putative uncharacterized protein n=2 Tax=Gammapr... 164 7e-39 UniRef50_Q1MNY2 Integrase n=1 Tax=Lawsonia intracellularis PHE/M... 163 2e-38 UniRef50_B6ATL3 Phage-related integrase n=1 Tax=Rhodobacterales ... 162 3e-38 UniRef50_D1RC05 Putative uncharacterized protein n=1 Tax=Parachl... 160 8e-38 UniRef50_C2E2T4 Bacteriophage integrase n=5 Tax=Lactobacillus Re... 159 2e-37 UniRef50_B2KEQ8 Integrase family protein n=1 Tax=Elusimicrobium ... 159 2e-37 UniRef50_B8D1P6 Phage integrase family protein n=1 Tax=Halotherm... 159 2e-37 UniRef50_D2RA91 Site-specific tyrosine recombinase XerC n=10 Tax... 158 3e-37 UniRef50_Q1MRZ7 Prophage DLP12 integrase (Fragment) n=1 Tax=Laws... 158 5e-37 UniRef50_A9IGA6 Phage-related integrase n=50 Tax=root RepID=A9IG... 158 6e-37 Sequences not found previously or not previously below threshold: UniRef50_Q1GLB2 Phage integrase n=12 Tax=Rhodobacterales RepID=Q... 240 1e-61 UniRef50_Q1NPW4 Phage integrase n=5 Tax=Deltaproteobacteria RepI... 233 1e-59 UniRef50_C9CXZ5 Phage integrase n=1 Tax=Silicibacter sp. TrichCH... 228 2e-58 UniRef50_A8LM37 Integrase family protein n=3 Tax=Rhodobacterales... 228 3e-58 UniRef50_B9KV34 Phage integrase n=4 Tax=Rhodobacter RepID=B9KV34... 212 2e-53 UniRef50_A6F6W3 Putative uncharacterized protein n=1 Tax=Moritel... 208 3e-52 UniRef50_B7KUI7 Integrase family protein n=1 Tax=Methylobacteriu... 207 1e-51 UniRef50_A7IMK8 Integrase family protein n=39 Tax=Bacteria RepID... 204 6e-51 UniRef50_A7HPZ7 Integrase family protein n=1 Tax=Parvibaculum la... 203 9e-51 UniRef50_A3VAJ4 Site-specific recombinase, phage integrase famil... 203 9e-51 UniRef50_A4U0F6 Phage integrase n=1 Tax=Magnetospirillum gryphis... 203 2e-50 UniRef50_B0UGI0 Integrase family protein n=1 Tax=Methylobacteriu... 201 4e-50 UniRef50_A6X006 Phage integrase family protein n=2 Tax=Alphaprot... 199 2e-49 UniRef50_Q3A6E0 Site-specific recombinase/integrase n=3 Tax=Pelo... 198 3e-49 UniRef50_D2YQV3 Phage integrase family protein n=2 Tax=Vibrio Re... 197 6e-49 UniRef50_B2HTK9 Integrase n=4 Tax=Acinetobacter RepID=B2HTK9_ACIBC 196 1e-48 UniRef50_A3UV17 Phage integrase n=1 Tax=Vibrio splendidus 12B01 ... 195 3e-48 UniRef50_C5RZC7 Phage integrase family protein n=1 Tax=Actinobac... 195 3e-48 UniRef50_A6X585 Phage integrase family protein n=1 Tax=Ochrobact... 194 4e-48 UniRef50_C3MAV8 DNA integration/recombination/invertion protein ... 193 1e-47 UniRef50_B6JJF3 Phage integrase family protein n=2 Tax=Bradyrhiz... 193 1e-47 UniRef50_A5CFJ0 Phage-related integrase n=19 Tax=Orientia tsutsu... 192 2e-47 UniRef50_A5VCT1 Phage integrase family protein n=3 Tax=Alphaprot... 191 4e-47 UniRef50_A9W5J9 Integrase family protein n=2 Tax=Alphaproteobact... 190 8e-47 UniRef50_Q7MKK6 Integrase n=6 Tax=Proteobacteria RepID=Q7MKK6_VIBVY 190 9e-47 UniRef50_C8QZM9 Integrase family protein n=1 Tax=Desulfurivibrio... 189 2e-46 UniRef50_C6E138 Integrase family protein n=1 Tax=Geobacter sp. M... 188 4e-46 UniRef50_A1ATP4 Phage integrase family protein n=2 Tax=Desulfuro... 188 6e-46 UniRef50_Q1NCW5 Phage integrase n=2 Tax=Sphingomonadaceae RepID=... 186 1e-45 UniRef50_A3X1G8 Probable integrase protein n=1 Tax=Nitrobacter s... 186 1e-45 UniRef50_A6FVR7 Phage integrase n=3 Tax=Roseobacter sp. AzwK-3b ... 186 2e-45 UniRef50_D0CWC5 Phage integrase family protein n=1 Tax=Silicibac... 185 2e-45 UniRef50_B3E8B2 Integrase family protein n=1 Tax=Geobacter lovle... 185 2e-45 UniRef50_Q3J1E6 Possible phage-related integrase n=2 Tax=Rhodoba... 185 3e-45 UniRef50_A5I9N5 Integrase, phage related n=12 Tax=Legionella Rep... 184 5e-45 UniRef50_A3WDG1 Site-specific recombinase, phage integrase famil... 184 5e-45 UniRef50_A4ACH4 Integrase n=2 Tax=Congregibacter litoralis KT71 ... 184 6e-45 UniRef50_A5L0D7 Site-specific recombinase, phage integrase famil... 183 2e-44 UniRef50_C9M987 Xylulose-5-phosphate/fructose-6-phosphate phosph... 182 2e-44 UniRef50_Q0EWR9 Integrative genetic element Gsu32, integrase n=1... 181 5e-44 UniRef50_Q2G674 Phage integrase n=1 Tax=Novosphingobium aromatic... 179 1e-43 UniRef50_C0N6F6 Site-specific recombinase, phage integrase famil... 178 3e-43 UniRef50_A4A7P6 Phage integrase n=1 Tax=Congregibacter litoralis... 178 6e-43 UniRef50_A8UVD2 Phage integrase family protein n=1 Tax=Hydrogeni... 177 1e-42 UniRef50_A8ZUN3 Integrase family protein n=2 Tax=Desulfobacterac... 176 1e-42 UniRef50_A5IH69 Site specific recombinase n=2 Tax=Legionella pne... 176 1e-42 UniRef50_Q39TC0 Phage integrase n=1 Tax=Geobacter metallireducen... 176 2e-42 UniRef50_B9R4Q2 Site-specific recombinase, phage integrase famil... 174 5e-42 UniRef50_A4Y9I4 Phage integrase family protein n=3 Tax=Shewanell... 174 6e-42 UniRef50_B3R9I1 Prophage INTEGRASE PROTEIN n=1 Tax=Cupriavidus t... 174 7e-42 UniRef50_A5L0D6 Site-specific recombinase, phage integrase famil... 173 1e-41 UniRef50_A5G635 Phage integrase family protein n=1 Tax=Geobacter... 173 2e-41 UniRef50_A6VBP4 Site-specific recombinase, phage integrase famil... 173 2e-41 UniRef50_A1AQ50 Phage integrase family protein n=1 Tax=Pelobacte... 172 3e-41 UniRef50_B5YIK4 Site specific recombinase n=1 Tax=Thermodesulfov... 171 6e-41 UniRef50_B2UB26 Integrase family protein n=2 Tax=Ralstonia RepID... 171 6e-41 UniRef50_A5W5R9 Phage integrase family protein n=2 Tax=Pseudomon... 170 1e-40 UniRef50_Q07JG4 Phage integrase family protein n=4 Tax=Bradyrhiz... 169 1e-40 UniRef50_Q083S5 Phage integrase family protein n=3 Tax=Shewanell... 169 2e-40 UniRef50_Q3JXH9 Integrase or site-specific recombinase n=24 Tax=... 169 2e-40 UniRef50_B8J055 Integrase family protein n=3 Tax=Desulfovibrio R... 168 3e-40 UniRef50_B1JZG3 Integrase family protein n=1 Tax=Burkholderia ce... 168 4e-40 UniRef50_Q2W9L7 Integrase n=1 Tax=Magnetospirillum magneticum AM... 168 5e-40 UniRef50_UPI0001AEC0CD phage integrase n=1 Tax=Alteromonas macle... 168 6e-40 UniRef50_Q28N95 Phage integrase n=1 Tax=Jannaschia sp. CCS1 RepI... 167 7e-40 UniRef50_B6AW56 Phage integrase, putative n=1 Tax=Rhodobacterale... 167 7e-40 UniRef50_B7DTD1 Integrase family protein n=2 Tax=Alicyclobacillu... 167 8e-40 UniRef50_A4YBB6 Phage integrase family protein n=8 Tax=Gammaprot... 167 8e-40 UniRef50_B2I529 Integrase family protein n=3 Tax=Proteobacteria ... 167 8e-40 UniRef50_Q3SF40 Putative phage integrase n=5 Tax=Proteobacteria ... 167 1e-39 UniRef50_Q144A9 Putative bacteriophage integrase n=1 Tax=Burkhol... 167 1e-39 UniRef50_B7NKE6 Integrase of prophage n=42 Tax=Enterobacteriacea... 166 2e-39 UniRef50_C4LB72 Integrase family protein n=9 Tax=Gammaproteobact... 166 2e-39 UniRef50_B5JBP0 Site-specific recombinase, phage integrase famil... 166 2e-39 UniRef50_A4F5J8 Putative uncharacterized protein n=1 Tax=uncultu... 166 2e-39 UniRef50_Q1NIG8 Phage integrase n=1 Tax=delta proteobacterium ML... 165 3e-39 UniRef50_A3D8Y1 Phage integrase family protein n=4 Tax=Shewanell... 165 3e-39 UniRef50_A4VPC8 Site-specific recombinase, phage integrase famil... 165 4e-39 UniRef50_A1AE42 Integrase-like protein n=11 Tax=root RepID=A1AE4... 164 5e-39 UniRef50_A8UUR8 Phage integrase family protein n=1 Tax=Hydrogeni... 164 5e-39 UniRef50_B7GVF6 Tyrosine recombinase xerC n=1 Tax=Acinetobacter ... 164 5e-39 UniRef50_A5ELA9 Putative phage-like integrase n=1 Tax=Bradyrhizo... 164 6e-39 UniRef50_A3WKP7 Site-specific recombinase, phage integrase famil... 164 7e-39 UniRef50_D0ADR3 Predicted protein n=2 Tax=Enterococcus faecium R... 164 7e-39 UniRef50_Q74H29 Integrative genetic element Gsu32, integrase n=1... 164 8e-39 UniRef50_D2U1I0 Phage integrase n=1 Tax=Arsenophonus nasoniae Re... 163 9e-39 UniRef50_C6QCE7 Integrase family protein n=1 Tax=Hyphomicrobium ... 163 1e-38 UniRef50_C0QB98 Putative uncharacterized protein n=1 Tax=Desulfo... 163 1e-38 UniRef50_B3AX37 Site-specific recombinase, phage integrase famil... 163 1e-38 UniRef50_C6X804 Integrase family protein n=1 Tax=Methylovorus sp... 163 1e-38 UniRef50_B2TTV9 Site-specific recombinase, phage integrase famil... 162 2e-38 UniRef50_A0EVM1 Integrase n=77 Tax=cellular organisms RepID=A0EV... 161 4e-38 UniRef50_C5SCJ7 Integrase family protein n=1 Tax=Allochromatium ... 161 4e-38 UniRef50_C9NQJ4 Phage integrase n=6 Tax=Gammaproteobacteria RepI... 161 5e-38 UniRef50_D0CYA1 Phage integrase n=1 Tax=Silicibacter lacuscaerul... 161 5e-38 UniRef50_B1RM53 Phage integrase n=4 Tax=Clostridium RepID=B1RM53... 161 5e-38 UniRef50_C0GUW3 Integrase family protein n=1 Tax=Desulfonatronos... 161 7e-38 UniRef50_A9IRV8 Int3 protein n=1 Tax=Bordetella petrii DSM 12804... 160 1e-37 UniRef50_Q2IUV8 Phage integrase n=1 Tax=Rhodopseudomonas palustr... 160 1e-37 UniRef50_B6ALQ5 Integrase n=1 Tax=Leptospirillum sp. Group II '5... 160 1e-37 UniRef50_B7UT12 Predicted P4-family integrase n=26 Tax=Enterobac... 159 1e-37 UniRef50_A8MGP9 Integrase family protein n=1 Tax=Alkaliphilus or... 159 1e-37 UniRef50_B4W813 Site-specific recombinase, phage integrase famil... 159 2e-37 UniRef50_Q93SE7 Integrase n=181 Tax=root RepID=Q93SE7_ECOLX 159 3e-37 UniRef50_A3VU58 Putative uncharacterized protein n=1 Tax=Parvula... 158 3e-37 UniRef50_A6AAK4 Integrase n=2 Tax=Vibrio RepID=A6AAK4_VIBCH 158 4e-37 UniRef50_D1R6D1 Putative uncharacterized protein n=1 Tax=Parachl... 158 4e-37 UniRef50_C6MJ08 Integrase family protein n=1 Tax=Nitrosomonas sp... 158 5e-37 UniRef50_C3NUM0 Phage Integrase n=55 Tax=root RepID=C3NUM0_VIBCJ 158 5e-37 UniRef50_Q1CP24 DNA integration/recombination/inversion protein ... 158 5e-37 UniRef50_C4XTG1 Site-specific recombinase n=1 Tax=Desulfovibrio ... 158 5e-37 UniRef50_P76542 Putative prophage CPZ-55 integrase n=6 Tax=Enter... 158 6e-37 UniRef50_A3M3W1 Phage integrase n=4 Tax=Acinetobacter baumannii ... 158 6e-37 >UniRef50_P71298 Putative prophage CP4-6 integrase n=7 Tax=Proteobacteria RepID=INTF_ECOLI Length = 466 Score = 618 bits (1593), Expect = e-175, Method: Composition-based stats. Identities = 466/466 (100%), Positives = 466/466 (100%) Query: 1 MFIPSIYLHQQLHYCKTAILNWSRKMALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTL 60 MFIPSIYLHQQLHYCKTAILNWSRKMALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTL Sbjct: 1 MFIPSIYLHQQLHYCKTAILNWSRKMALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTL 60 Query: 61 ACRATSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAV 120 ACRATSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAV Sbjct: 61 ACRATSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAV 120 Query: 121 KIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGES 180 KIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGES Sbjct: 121 KIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGES 180 Query: 181 KKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNY 240 KKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNY Sbjct: 181 KKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNY 240 Query: 241 QKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVL 300 QKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVL Sbjct: 241 QKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVL 300 Query: 301 LLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNK 360 LLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNK Sbjct: 301 LLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNK 360 Query: 361 EGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIM 420 EGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIM Sbjct: 361 EGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIM 420 Query: 421 GHKPSALAEKHYRRRPLDLLRKWHEKIETWILNEAGITIKNNVDMR 466 GHKPSALAEKHYRRRPLDLLRKWHEKIETWILNEAGITIKNNVDMR Sbjct: 421 GHKPSALAEKHYRRRPLDLLRKWHEKIETWILNEAGITIKNNVDMR 466 >UniRef50_B7D090 Phage integrase family protein n=1 Tax=Burkholderia pseudomallei 576 RepID=B7D090_BURPS Length = 449 Score = 400 bits (1028), Expect = e-110, Method: Composition-based stats. Identities = 214/440 (48%), Positives = 285/440 (64%), Gaps = 18/440 (4%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIG 87 L+R FT R+R F P KQ F+WD+ L RAT+G+ ++VFQ AG T+R TIG Sbjct: 23 LARINFTAGRVRDFRCPPDAKQIFMWDSGAPGLGLRATAGSVSYVFQGRIAGNTVRTTIG 82 Query: 88 NINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYL 147 + W ID AR +AR LQ LID G DPR+ KA IA ++ + ESR+ + T AW+ Y+ Sbjct: 83 DARTWDIDGARQKARELQKLIDEGKDPRVEKAAAIAVTQARRVESRRHQATLDAAWKSYI 142 Query: 148 QELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRG-QGPTSAGPLASLLNLPLSELTP 206 R+ +S ++ADH +S RGGE +KRG + P G L+SLL++PL +LT Sbjct: 143 DVNRSR--------WSDHHVADHEKVSHRGGEMRKRGRKQPRVRGALSSLLDVPLPDLTA 194 Query: 207 DYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSA 266 D IA WL E ++RPT + A+RLLRA + W Q ++ G++P + + VR+ VP Sbjct: 195 DVIAEWLKRETESRPTQASLAFRLLRACLNWCAEQHEWSGLVPEHVCRTRKVRQNVPKVR 254 Query: 267 SKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMR 326 +K+D CLQ+EQL WF VR + NP+ SA+LQ LLLTGARREE+ L+W+D+DF+W++M Sbjct: 255 AKSD-CLQREQLAPWFDGVRQIANPVVSAFLQALLLTGARREEMNELKWTDLDFRWNTMM 313 Query: 327 IKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRS-NSKSGKIIEPRSAHNRAL 385 ++DK+EG+R IPLTPY+ LL L + WVF S S SG++ P H L Sbjct: 314 LRDKVEGDRTIPLTPYMGLLLGALPRR-------NEWVFSSVKSGSGRLQAPDDRHRIVL 366 Query: 386 VLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHE 445 A L ++LHGLRRSF TL EW+E P G+VAQIMGHKPSA AEKHY++RP+DLLR WH Sbjct: 367 RAAHLEGLTLHGLRRSFSTLTEWIECPAGVVAQIMGHKPSATAEKHYKQRPIDLLRMWHT 426 Query: 446 KIETWILNEAGITIKNNVDM 465 KIE WILNEAGIT+ M Sbjct: 427 KIEAWILNEAGITLPATQQM 446 >UniRef50_A4LPJ2 Phage integrase n=2 Tax=Burkholderia pseudomallei RepID=A4LPJ2_BURPS Length = 437 Score = 394 bits (1011), Expect = e-108, Method: Composition-based stats. Identities = 202/436 (46%), Positives = 275/436 (63%), Gaps = 20/436 (4%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIG 87 ++R FT R+R F P KQ F+WDA + L RAT+G+ +F+FQ AG T+R TIG Sbjct: 1 MARINFTAGRVRDFRCPPDSKQVFMWDAGMPGLGLRATTGSVSFIFQGRIAGNTIRTTIG 60 Query: 88 NINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYL 147 ++ W ID AR +AR L+ LID G DPR+ KA + + + ES++ VT AW+ ++ Sbjct: 61 DVRAWDIDGARQKARELKKLIDEGKDPRVEKAAVLKAVQEQRVESQRRHVTLEDAWKAHI 120 Query: 148 QELRTGISAKTKRPYSTRYIADHINLSSRGGESK---KRGQGPTSAGPLASLLNLPLSEL 204 + R + ++D +S RGG++ KRG AG L LL++PLS L Sbjct: 121 EANRAR--------WGKHTLSDREKVSRRGGDAPKAGKRGGALRVAGALVGLLDVPLSGL 172 Query: 205 TPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPV 264 T D IA WL+ E RPT + A+RLLRA + W +K+ G++P + VR+ VP Sbjct: 173 TADTIADWLARETATRPTQASLAFRLLRACLNWCAEHEKWSGLVPERVCSTRKVRQHVPK 232 Query: 265 SASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSS 324 +K+D CLQ+EQL WFS VR + N S YLQ+LLLTGAR E+ ++W+DVDF+W++ Sbjct: 233 PRAKSD-CLQREQLAPWFSGVRGIGNAHYSTYLQMLLLTGARPGELLEVKWADVDFRWNT 291 Query: 325 MRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRS-NSKSGKIIEPRSAHNR 383 + ++DKIEGER IPLTPYVS LL L + VF S SK+G++ P H+ Sbjct: 292 LNLRDKIEGERTIPLTPYVSSLLAALPRI-------NDLVFASTRSKTGRMKAPNVPHHA 344 Query: 384 ALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKW 443 L A + ++LHGLRRSF TL EW+E P G+VAQIMGHKPSA AEKHY++RP+DLLR W Sbjct: 345 VLEKAHIEGLTLHGLRRSFATLTEWIECPVGVVAQIMGHKPSATAEKHYKQRPIDLLRMW 404 Query: 444 HEKIETWILNEAGITI 459 H KIETW+LNEAG++ Sbjct: 405 HTKIETWMLNEAGVSP 420 >UniRef50_Q2SV18 Phage integrase n=20 Tax=Betaproteobacteria RepID=Q2SV18_BURTA Length = 479 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 222/465 (47%), Positives = 291/465 (62%), Gaps = 44/465 (9%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTI 86 ++++ FT ER+ + G++QT WD L R T SG K++VF+ GKT+R+TI Sbjct: 1 MTKENFTIERVTGYECTPGRQQTIYWDKKQQGLGLRVTASGVKSYVFEGRLFGKTVRITI 60 Query: 87 GNINDWKIDD----------------ARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQA 130 G+ N W ++ AR EA RL+ L+D GIDPR +A + AE E+ + Sbjct: 61 GSPNAWPLERHATTDAATGKTIERLGARQEAARLKALMDRGIDPREERAEQRAEHEARKL 120 Query: 131 ESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSA 190 ++ + T S AW YL R+ +S R+ DH L+ GG KRG+G T Sbjct: 121 DALRQNATVSEAWAAYLDAHRSK--------WSGRHYYDHEKLAQAGGLPWKRGRGTTIP 172 Query: 191 GPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPG 250 GPLA+L+ L L++L + +A WL E + RPT T +YR LRAFI+W + +Y G I Sbjct: 173 GPLATLMPLKLTDLNAERVAMWLEAEAEKRPTNTEQSYRKLRAFIRWCEDKPEYSGSIAP 232 Query: 251 DLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEI 310 + VR VP + +K+D CLQ+EQL WF+AVR ++NP+ SAYLQ LLLTGARREE+ Sbjct: 233 NAYAARAVRAAVPRTKAKSD-CLQREQLLVWFTAVRQIDNPVISAYLQGLLLTGARREEL 291 Query: 311 ASLRWSDVDFKWSSMRIKDKIEGE--RIIPLTPYVSELLNVLAQSPNSDVNK-------- 360 A+LRW DVDF+W S+ + DKIEG R IPLTPY++ LL L Q N+ Sbjct: 292 AALRWKDVDFRWRSLTMNDKIEGTGGRTIPLTPYLASLLTNLKQMNEIPPNRRQLASLTE 351 Query: 361 -------EGWVFRSN-SKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVP 412 WVF SN S+ GKI EPR AHN A+ A LPH++LHGLRRSFGTL+EWVEVP Sbjct: 352 KGKSWSPSEWVFTSNRSEDGKIAEPRKAHNSAIEAAGLPHLTLHGLRRSFGTLSEWVEVP 411 Query: 413 TGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWILNEAGI 457 G+VAQI GHKPSALAEKHYRRRPLDLLR WH+KIE+W+L +AG+ Sbjct: 412 VGVVAQIQGHKPSALAEKHYRRRPLDLLRMWHDKIESWMLQQAGL 456 >UniRef50_Q82XM2 Phage integrase n=1 Tax=Nitrosomonas europaea RepID=Q82XM2_NITEU Length = 416 Score = 366 bits (938), Expect = 1e-99, Method: Composition-based stats. Identities = 202/437 (46%), Positives = 266/437 (60%), Gaps = 29/437 (6%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIG 87 L++ + T R+ T P Q FLWD LA RAT+G +AF+FQ +AGK++R+TIG Sbjct: 2 LTKVRLTPSRIAAHTCPADASQAFLWDTATPGLAVRATAGKRAFIFQGRFAGKSIRITIG 61 Query: 88 NINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYL 147 + W I+ AR AR LQ L+D G DPR+ K KIA ++R T AW DY+ Sbjct: 62 DTEVWTIEQARQRARELQGLVDQGRDPRLVKQEKIAA----DVQARITDEPALPAWRDYI 117 Query: 148 QELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQG-----PTSAGPLASLLNLPLS 202 +S + ADH+ ++ GGE RG+ T G L LL+LPL Sbjct: 118 AARSGK--------WSEAHAADHLKMARDGGEPVTRGRRIGAPAYTEKGILRPLLDLPLK 169 Query: 203 ELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMV 262 +T + +A WL E RP A LL F+ W Q Y+ + D +++ + Sbjct: 170 GITREKVAQWLDNEATRRPAQARLALSLLGTFLSWCGNQPAYRNQVNSDACA--KLKREL 227 Query: 263 PVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKW 322 P ++ D CLQ+EQL SWF+AVRS++NP+ SAYLQ LLLTGARREE+A L W DVDF+W Sbjct: 228 PKPTARTD-CLQREQLASWFAAVRSIDNPVMSAYLQSLLLTGARREELAGLGWEDVDFQW 286 Query: 323 SSMRIKDKIEGE-RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNS-KSGKIIEPRSA 380 ++ + DK+E R IPLTPYVS+LL L + +VF S KSG++ EPR A Sbjct: 287 QTIHLADKVEHSGRTIPLTPYVSQLLQSLPKI-------NEFVFASKRAKSGRLQEPRKA 339 Query: 381 HNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLL 440 HN+A+ A LP +S+HGLRRSF TL+EWVE P+GI AQIMGHKPSA+AE+HY+RRP+DLL Sbjct: 340 HNQAIEAAGLPPLSIHGLRRSFATLSEWVEAPSGITAQIMGHKPSAIAERHYKRRPVDLL 399 Query: 441 RKWHEKIETWILNEAGI 457 R WH KIE WIL+ A I Sbjct: 400 RVWHTKIEEWILSNANI 416 >UniRef50_C6MHB2 Integrase family protein n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MHB2_9PROT Length = 434 Score = 365 bits (937), Expect = 2e-99, Method: Composition-based stats. Identities = 187/436 (42%), Positives = 257/436 (58%), Gaps = 23/436 (5%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTI 86 + + FT +R+ F G KQ+ WD + L R T SGAK+++FQ+ +T+R+TI Sbjct: 1 MKWKNFTTDRVAGFKCKPGAKQSIYWDGKIPGLGLRVTASGAKSYIFQTEMHNRTIRLTI 60 Query: 87 GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAES----LQAESRKTKVTFSVA 142 G+ W I DA+ EA RL+ + D IDPR KA E+ +A+ + VT A Sbjct: 61 GDSRAWSISDAQDEATRLKVMTDQSIDPRQVKADAAVAKEAAEVARKAQGNRETVTVGRA 120 Query: 143 WEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLS 202 W++Y+ + K + ++ DH+ GGE + R + T G LA L ++ L Sbjct: 121 WDEYVNVM--------KSTWGALHLHDHVRAMQSGGEQRTRSKKLTEPGTLAPLADMRLI 172 Query: 203 ELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMV 262 +LT + I AW E RP +A LL F+ W Y II + AQ V+K + Sbjct: 173 DLTTERITAWAKVEGTKRPARARNARTLLSTFLNWCITHPTYSAIIASNPAQSKEVKKYL 232 Query: 263 PVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKW 322 +SK +D LQ+EQL +WF+AV+ + NP+ SAYLQ LLLTGAR E+ +L W D+DF+W Sbjct: 233 GKPSSK-NDALQREQLSAWFNAVKQIQNPVISAYLQTLLLTGARPNELITLCWEDIDFQW 291 Query: 323 SSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSN-SKSGKIIEPRSAH 381 +S+ IKDK+EG R+IPLTPYV LL+ + + W F S S SG ++EPR AH Sbjct: 292 NSITIKDKVEGLRVIPLTPYVGYLLSAMPRR-------NQWAFSSPTSASGHLVEPRIAH 344 Query: 382 NRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLR 441 ++A +A L ++LHGLRRSF +L EW+E P GI AQI GHKP + EKHY RRPLDLLR Sbjct: 345 DKACKIAGL-DVTLHGLRRSFASLCEWIETPAGIAAQIQGHKPQGVREKHYIRRPLDLLR 403 Query: 442 KWHEKIETWILNEAGI 457 WH KIE WIL +AGI Sbjct: 404 VWHVKIEEWILEQAGI 419 >UniRef50_Q6ARX0 Related to integrase n=5 Tax=Proteobacteria RepID=Q6ARX0_DESPS Length = 465 Score = 362 bits (930), Expect = 1e-98, Method: Composition-based stats. Identities = 196/446 (43%), Positives = 259/446 (58%), Gaps = 28/446 (6%) Query: 25 KMALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVY------- 77 + A+ R T R+R LP KKQ FLWD D L R T AK F+FQS Sbjct: 24 EPAMPR--LTLNRIRNAKLPPNKKQIFLWDEDAKGLGVRITGSAKVFIFQSRMLMPDKNG 81 Query: 78 --AGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKT 135 T R+ IG + ++DAR ARR + GIDPR A+ + + E ++ Sbjct: 82 ILKPSTFRIKIGGCDSVLLEDARNVARRYAAQVAEGIDPRQARQRTAENEATERQERKRQ 141 Query: 136 KVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLAS 195 VT AW Y++E R +ST+Y +DH + S GG+ KKRG+G T AGPLAS Sbjct: 142 DVTIGKAWPTYMEERRP--------NWSTKYYSDHERIISPGGKQKKRGKGLTVAGPLAS 193 Query: 196 LLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQD 255 + NLPLS +T D I WL+ E+ RPT T A+ +LR F+ W K+Y G+ P + Sbjct: 194 IANLPLSSVTADSIKKWLADEQPKRPTETRRAFEMLRTFLNWCEADKRYHGLAPPNAC-S 252 Query: 256 YNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRW 315 ++K + DD LQ+EQL WF++VR N + SAY+Q+L L GARREE+ SL+W Sbjct: 253 AKIKKDNLTKKNSRDDALQREQLSVWFASVRRYENKVLSAYVQMLFLIGARREELLSLKW 312 Query: 316 SDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRS-NSKSGKI 374 SDVDF+W + I K R +PLTPYV+ LL+ L + WVF S K G++ Sbjct: 313 SDVDFRWKKVHILGKGAVPRDLPLTPYVAALLSKLPRR-------NEWVFSSTRGKEGRL 365 Query: 375 IEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRR 434 P A + + AE+ I+LHGLRRSF TL+EW+E P GIV QI GH+PSA AEKHY++ Sbjct: 366 QSPTKAFQKMMSRAEIDDITLHGLRRSFSTLSEWLETPVGIVYQIQGHEPSATAEKHYKK 425 Query: 435 RPLDLLRKWHEKIETWILNEAGITIK 460 RP+DLLRKWH KIE WIL EAG+ + Sbjct: 426 RPVDLLRKWHIKIEAWILEEAGVEVP 451 >UniRef50_A1WB37 Phage integrase family protein n=5 Tax=Burkholderiales RepID=A1WB37_ACISJ Length = 452 Score = 359 bits (921), Expect = 1e-97, Method: Composition-based stats. Identities = 193/444 (43%), Positives = 263/444 (59%), Gaps = 26/444 (5%) Query: 30 RQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAGKTLRMTIGN 88 R T + R P GK+Q F+ D++ L R T+ GAK+FV+++ +T+R TIG+ Sbjct: 15 RINLTAGAIDRLACPAGKQQAFMRDSEAPGLRVRVTAAGAKSFVYEAKLDRQTIRRTIGD 74 Query: 89 INDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQ 148 + W I+ AR EARRL ++D G DPR + + A+ + +A + VT W YL+ Sbjct: 75 VKLWSIEQARTEARRLAVVLDNGQDPREIERQQQADKAAAKATAAVQAVTVGEVWALYLE 134 Query: 149 ELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRG---QGPTSAGPLASLLNLPLSELT 205 R + R+ ADH+ L GGE KRG +G T AGPL L+ L L +LT Sbjct: 135 ARRPH--------WGARHHADHVKLVQVGGEVSKRGTRGRGVTVAGPLHPLMGLALRDLT 186 Query: 206 PDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPG-DLAQDYNVRKMVPV 264 I AW + E Q RPT A+R L+AF+ W Q +Y +P + A+ R+ + Sbjct: 187 APVIEAWAAREAQTRPTSARLAWRCLKAFLSWCAEQSEYAPAMPSVNPAKTKKAREALGK 246 Query: 265 SASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSS 324 + K D L KEQL +WF+AV+ + NPIA+AYLQVL+LTGAR E+ LRW DV+ KW Sbjct: 247 AGVKQDALL-KEQLPAWFTAVQQIQNPIAAAYLQVLVLTGARPGEVLGLRWEDVNTKWKG 305 Query: 325 MRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRS-----NSKSGKIIEPRS 379 + I+DK+EGER+IPLTPYVS LL+ L + WVF S +++ + PR+ Sbjct: 306 LTIRDKVEGERVIPLTPYVSHLLHSLPRR-------SDWVFPSTARGKDTEGQTLSIPRA 358 Query: 380 AHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDL 439 H A +A + ++LHGLRRSF +L EW+E+P G+VAQIMGHKPSA AEKHY RPLDL Sbjct: 359 PHTAACAVAGIEGLTLHGLRRSFKSLTEWLEIPAGVVAQIMGHKPSATAEKHYTVRPLDL 418 Query: 440 LRKWHEKIETWILNEAGITIKNNV 463 LR HE+IE WIL +AGI Sbjct: 419 LRVHHERIEAWILEQAGIVFDAKA 442 >UniRef50_D0S9N1 Phage integrase n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0S9N1_ACIJO Length = 415 Score = 335 bits (860), Expect = 2e-90, Method: Composition-based stats. Identities = 150/430 (34%), Positives = 225/430 (52%), Gaps = 21/430 (4%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGA-KAFVFQSVYAGKTLRMTIGNI 89 K T + R + K TF WD + T K+++FQ + R+ IG++ Sbjct: 1 MKLTKPAIDRIDCSDKDKPTFFWDEKTPGFGVKVTPKNNKSYIFQGRIGLQNRRIKIGDV 60 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 + WK+DDAR A+ L + GIDP I + +A+ + L + ++ + F W +YL+ Sbjct: 61 DVWKLDDARKYAQELAIMCHKGIDPLIERKKALADNKELLKQEKRKTIKFKDVWFEYLKA 120 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 + + R DHI LS RGG + TS P+ L LSELT + Sbjct: 121 RQP--------NWRPRSYQDHIELS-RGGYDPENNSVYTSQ-PIFQLFEYKLSELTAGVV 170 Query: 210 AAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKA 269 WL RPT +A AYRL RAF+ W + Y+ ++P V+ VP +K Sbjct: 171 CDWLDH-NDFRPTTSAKAYRLTRAFLNWCEEHEDYENLVPLKSYNSKKVKDKVPSPKAK- 228 Query: 270 DDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKD 329 +DCL K+ LK WF V L + + +L L+TG R+ E+ SL+W+DVDF+W + +++D Sbjct: 229 NDCLMKQHLKPWFEEVNKLTSRKIAIFLICSLITGCRKNELLSLKWTDVDFRWKTAKVRD 288 Query: 330 KIEGE-RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNS-KSGKIIEPRSAHNRALVL 387 KIE E R+IPLT YV L L ++ +S ++F S K G I+ P + + Sbjct: 289 KIEDEGRLIPLTAYVESLFLELRKNSDSK-----FIFSSKGAKCGHIVNPYDSLEKICKK 343 Query: 388 AELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKI 447 + ++ HGLRRS+ TLA W ++ G +AQI GHKPSAL E+HY RP+D+LR+ ++ Sbjct: 344 LNIE-LTPHGLRRSYKTLAIWAKINEGSLAQISGHKPSALVERHYIVRPMDMLRETLQEY 402 Query: 448 ETWILNEAGI 457 E WIL + Sbjct: 403 EDWILQQVRN 412 >UniRef50_Q12DC0 Phage integrase n=1 Tax=Polaromonas sp. JS666 RepID=Q12DC0_POLSJ Length = 440 Score = 327 bits (839), Expect = 4e-88, Method: Composition-based stats. Identities = 166/444 (37%), Positives = 244/444 (54%), Gaps = 22/444 (4%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAK-AFVFQSVYAGKTLRMTI 86 ++R FT R+ F P K Q FLWDA L R T+ K ++VFQ Y KT+R+TI Sbjct: 1 MARIAFTAGRVAGFKCPPEKSQVFLWDAATPGLGLRTTAAGKPSYVFQGRYQEKTIRVTI 60 Query: 87 GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRK-------TKVTF 139 G+ + W I A+ +AR LQ LID G DPR K +A +A + +T Sbjct: 61 GSPDAWSIPQAQEKARALQRLIDEGRDPRDLKRDAVAAGAERKAAAAAKVQADKVASLTV 120 Query: 140 SVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNL 199 W+ YLQE + K + + Y AD +++ GG KKRGQG T GP+ LL L Sbjct: 121 GEVWQTYLQEGK----PKRRDAWKPGYRADLELMATPGGVKKKRGQGLTRQGPIYPLLAL 176 Query: 200 PLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVR 259 ++E+ D + AW E A A+ + + F++W + + Y+ +I D + + Sbjct: 177 QMTEVNEDALKAWFDRESLAGKHQAARAFMMFKGFLRWCSARPAYRSLIDRDAGKAAAIV 236 Query: 260 KMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVD 319 + +P + + D L+ Q++ W++ V L+N AS YL+ LLLTGARREE+A+L+W DVD Sbjct: 237 ENLPQATHRTDKLLKG-QVQGWWTGVEQLSNRTASVYLRALLLTGARREEVAALKWGDVD 295 Query: 320 FKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRS 379 F+W + + DK++ R IPL+PY++ +L L + +VF S SKSG I++ R Sbjct: 296 FQWRKLTLADKVDATRTIPLSPYMAHMLAGLPRV-------GAFVFASASKSGHIVDARD 348 Query: 380 AHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDL 439 + +A+ AE+ H++ HGLRR+F T VP GIVAQI GHK SA AE + R LD Sbjct: 349 SMQKAVTEAEVGHLTFHGLRRTF-TQTGRGVVPAGIVAQIQGHKSSATAEGYDIR-TLDE 406 Query: 440 LRKWHEKIETWILNEAGITIKNNV 463 L + E+IE IL+ AG+ Sbjct: 407 LSPYLEQIERHILSLAGVQFDAGA 430 >UniRef50_C6MJ55 Integrase family protein n=2 Tax=Betaproteobacteria RepID=C6MJ55_9PROT Length = 371 Score = 292 bits (748), Expect = 1e-77, Method: Composition-based stats. Identities = 171/377 (45%), Positives = 234/377 (62%), Gaps = 22/377 (5%) Query: 92 WKIDDARAEARRLQTLIDTGIDPRIAKAVK----IAEAESLQAESRKTKVTFSVAWEDYL 147 W I +A+ EARRLQT+ID G DPR KA + A + +A+ + VT AW++Y+ Sbjct: 4 WTIGNAQIEARRLQTIIDQGNDPREVKADQYAAKTAATAAKKAQEEREIVTVGQAWKEYV 63 Query: 148 QELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPD 207 + +S +I DH + GG+++KR + T G LA+L + L +LTP+ Sbjct: 64 TARKPL--------WSELHIRDHEKVMQAGGDARKRSKKLTEPGSLATLAKIRLVDLTPE 115 Query: 208 YIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSAS 267 + W TE RPT A RLLRAF+ W Y+ I+ + AQ+ + R+ + + Sbjct: 116 LVTEWAQTEAMTRPTRARLALRLLRAFLNWCGRHSTYKAIVTSNPAQNNDARESLGKAKV 175 Query: 268 KADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI 327 K D LQ+EQL +WF A++ + NP+ SAYLQ+LLLTGARREEIASLRW D+DF+W S+ I Sbjct: 176 K-HDVLQREQLPAWFKAIKQIQNPVISAYLQILLLTGARREEIASLRWQDIDFQWKSLTI 234 Query: 328 KDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNS-KSGKIIEPRSAHNRALV 386 DK++ RIIPLTPYV+ LL+ L + WVF S S SG++ +P AH +A Sbjct: 235 NDKVDDFRIIPLTPYVANLLSTLTRR-------NEWVFSSPSAASGRLTDPSIAHRKACA 287 Query: 387 LAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEK 446 +A L ++LHGLRRSF +L EW+E+P+GI AQI GHKP + E++Y RRPLDLLR WH K Sbjct: 288 IAGL-DLTLHGLRRSFASLCEWIEMPSGIAAQIQGHKPQGVREQNYIRRPLDLLRVWHVK 346 Query: 447 IETWILNEAGITIKNNV 463 IE WIL EAGI + Sbjct: 347 IEEWILQEAGINFVSTQ 363 >UniRef50_Q3J8Z8 Phage integrase n=2 Tax=Nitrosococcus oceani RepID=Q3J8Z8_NITOC Length = 406 Score = 290 bits (741), Expect = 9e-77, Method: Composition-based stats. Identities = 111/443 (25%), Positives = 178/443 (40%), Gaps = 49/443 (11%) Query: 25 KMALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGA-KAFVFQSVYAGKTLR 83 K A R K T + R P + Q F WD+ + R ++G K+FV Q G+ R Sbjct: 2 KPAPQRTKLTKTVVDRLPAPT-RGQAFYWDSALPCFGVRVSAGGVKSFVIQKRIQGREKR 60 Query: 84 MTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAW 143 +T+G + AR EA RL I G +P K A+++ VT A Sbjct: 61 ITLGKYGHLTLMQARKEAARLLGEIAVGRNPLAEK-----------AQAKLRAVTLGEAL 109 Query: 144 EDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSE 203 E YL T RP R I G T + + PL+ Sbjct: 110 EHYL----------TSRPLKARTIQ---------------GTRHTMGKCFSDWMKRPLTS 144 Query: 204 LTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWS--NYQKKYQGIIPGDLAQDYNVRKM 261 +T D +AA + A R LRA ++ +Y + D + Sbjct: 145 ITRDKVAARHKQLGTASKSHANLAMRYLRAVFNFAMADYTDNEGRPVIADNPVNRLSEAR 204 Query: 262 VPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFK 321 + ++ +LK W AV+ L N A Y ++LLTG RR E +LRW +VD Sbjct: 205 TWFRVERRRTVIKSHELKPWMQAVQRLENGAARDYFMLVLLTGLRRTEALNLRWQNVDLV 264 Query: 322 WSSMRIKDKIEGE-RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSA 380 +++ ++D + +PL+ Y++E+L + +VF ++ G++ R Sbjct: 265 ANTLTVQDTKNHQAHTLPLSDYLTEMLAARLED-----TYSEYVFSTSR--GRLSNLRGP 317 Query: 381 HNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLL 440 A + S+H LRR+F T+A+ ++VP V ++ HK + Y + L Sbjct: 318 LAEVRSYAGIS-FSIHDLRRTFATVADSLDVPGYAVKALLNHKAANDVTAGYIVVDTERL 376 Query: 441 RKWHEKIETWILNEAGITIKNNV 463 R +KI ++L G+ V Sbjct: 377 RAPMQKITDFMLRAGGLWEGGEV 399 >UniRef50_C6RMM9 Integrase n=1 Tax=Acinetobacter radioresistens SK82 RepID=C6RMM9_ACIRA Length = 432 Score = 281 bits (719), Expect = 4e-74, Method: Composition-based stats. Identities = 99/441 (22%), Positives = 177/441 (40%), Gaps = 49/441 (11%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMT 85 M+ R K T + + L D+++ A R + K ++ + G+T+R T Sbjct: 15 MSTPRVKLTKSFIDQLELTPA----IYRDSELIGFAVRVNNSYKTYIVEKKVLGRTVRST 70 Query: 86 IGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWED 145 +G + + AR AR + GI+P K KI++ E + + K K T A+++ Sbjct: 71 LGLHGNITLAQAREMAREKLLQMSQGINPNDEKKKKISD-EDDRVKLEKQKPTVKEAFQN 129 Query: 146 YLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 Y+ + + + I D+ + + L N L E++ Sbjct: 130 YM----------SLKTLKPKTIDDYTTVIDK---------------YLEDWQNFKLDEIS 164 Query: 206 PDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQG----IIPGDLAQDYNVRKM 261 I + +N A R+ RA +S + +IP + + + +K Sbjct: 165 RKMIQQKHADLSKNSKAQANMAMRVFRAVYNFSIEHYLDENDQPILIPYNPVKTLSAKK- 223 Query: 262 VPVSASKADDCLQKEQLKSWFSAV-----RSLNNPIASAYLQVLLLTGARREEIASLRWS 316 V + + ++Q+ W A+ R + ++ L+LTG RREE SL WS Sbjct: 224 VWNKIKRRKTYINEDQIPDWIRAIFDYKDRGQSLETNRDFMLTLVLTGFRREECESLPWS 283 Query: 317 DVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRS-NSKSGKII 375 +D K+ + D GE P T + + L L + D+ + WVF S S SG I+ Sbjct: 284 SIDLKYGKITSIDPKNGE---PHTLPMGDFLWELMKKRRRDI-QSEWVFPSAKSASGHIV 339 Query: 376 EPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHK---PSALAEKHY 432 ++ L E+ + H LRR+FG++AE ++ + +++ HK Y Sbjct: 340 NISKVRSKINELCEIK-FTFHDLRRTFGSIAEGLDYGHYTIKRLLNHKKDSDDNDVTSGY 398 Query: 433 RRRPLDLLRKWHEKIETWILN 453 + LR +IE +L Sbjct: 399 IQVSDKRLRAAMNEIEDIVLG 419 >UniRef50_C6BFQ2 Integrase family protein n=4 Tax=Betaproteobacteria RepID=C6BFQ2_RALP1 Length = 412 Score = 275 bits (703), Expect = 3e-72, Method: Composition-based stats. Identities = 99/434 (22%), Positives = 165/434 (38%), Gaps = 44/434 (10%) Query: 32 KFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTIGNIN 90 FT + +PE K + +D V+ LA SG + FV K R+ IG Sbjct: 14 NFTKAAIEALPVPE-KGWKYYYDTKVSGLAIGIGASGVRTFVLYRKVNRKPERIKIGRYP 72 Query: 91 DWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQEL 150 D ++ AR +A L I TG +P K ++ AE +TF ++ Y Sbjct: 73 DLTVEKARTQAMALNGEIATGTNPAELKRIRRAE------------MTFGDLFDQY---Y 117 Query: 151 RTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIA 210 + K + D S+R G +L + LS ++ IA Sbjct: 118 KNHSLPNKKTSDEDKQKFDQYLSSNRDGV---------------NLASRQLSAISKADIA 162 Query: 211 AWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKAD 270 L+ + + + + P + + D Sbjct: 163 QLFGKISMEHKITANRVLALVSSIFGKAIEWGIWNQMNPCQGIRRN--------RENSRD 214 Query: 271 DCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDK 330 L ++L +F V + N Y+ V LLTGARR + ++RW DV+ + + RI + Sbjct: 215 RFLHPDELPKFFEHVLAYPNATLRDYMLVSLLTGARRSNVLAMRWEDVNLERAEWRIHET 274 Query: 331 IEG-ERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAE 389 G + +PL P LL + P + +VF KSG ++EP+ A L A Sbjct: 275 KNGTPQSVPLVPDAVALLRNRQEMPECE--DSPFVFPGTGKSGHLVEPKKAWKIVLTQAG 332 Query: 390 LPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIET 449 + + LH LRR+ G+ ++ + + HK +A Y R ++ +R E Sbjct: 333 IKDLRLHDLRRTMGSWQAGTGANLSVIGRSLNHKSTATTA-IYARLWMEPVRSSMETAAA 391 Query: 450 WILNEAGITIKNNV 463 +L+ AGI + + Sbjct: 392 AMLSAAGIESRQDA 405 >UniRef50_B9ZR50 Integrase family protein n=2 Tax=Gammaproteobacteria RepID=B9ZR50_9GAMM Length = 424 Score = 267 bits (683), Expect = 6e-70, Method: Composition-based stats. Identities = 114/459 (24%), Positives = 195/459 (42%), Gaps = 68/459 (14%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAGKTLRMTI 86 ++ K +R+ P K TF+WD+ V R T+ GAKAFV+Q G++ R+TI Sbjct: 1 MAETKKLTKRVCDAATPPEKGTTFIWDSAVAGFGLRVTAAGAKAFVWQGRVNGRSQRLTI 60 Query: 87 GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDY 146 G ++ ARAEA+R+ + +G DPR K + +A +T A +Y Sbjct: 61 GKPGALTVEKARAEAKRIAGEVASGKDPRAEKHARKVKA-----------LTLREAVREY 109 Query: 147 LQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTP 206 R++AD R + L+ + P++E+T Sbjct: 110 RDA---------------RHLAD-----------TTRDSFDRAMKALSDWMARPVTEITR 143 Query: 207 DYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKY---QGIIPGDLAQDYNVRKMVP 263 D +A ++ P A+R LRA + ++ Y + ++P + + + K Sbjct: 144 DMVARRHRKLGEDSPAFANLAFRYLRAVLNHASEAHAYPDGRPLLPDNPVKRLSATK-AW 202 Query: 264 VSASKADDCLQKEQLKSWFSAVRSLNNP------------------IASAYLQVLLLTGA 305 + +++ +L+ W AV+ L +P IA VL+LTG Sbjct: 203 YRVDRRRTYIERHELRPWMQAVQGLAHPPEREPGEGKTKPKLRNGAIARDVFMVLVLTGL 262 Query: 306 RREEIASLRWSDVDFKWSSMRIKDKIE-GERIIPLTPYVSELLNVLAQSPNSDVNKEGWV 364 RR E LRW DV F ++ I D +PL+ Y+ ELL Q + +V Sbjct: 263 RRNEALGLRWEDVSFAGRTLTIPDPKNYQPHTLPLSDYLVELLKARQQE-----SGGEYV 317 Query: 365 FRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKP 424 F S++ + R A +R ++ + + H LRR+F T+AE ++VP V ++ HK Sbjct: 318 F-SDAAGTRFQNLRYAVDRVAEVSGVRAM-PHDLRRTFATVAESLDVPAYAVKALLNHKT 375 Query: 425 SALAEKHYRRRPLDLLRKWHEKIETWILNEAGITIKNNV 463 + Y + + LR ++I ++L G+ +V Sbjct: 376 TGDVTAGYIQMTPERLRGPMQRITDFMLAAGGLRDGADV 414 >UniRef50_Q5P855 Phage integrase n=5 Tax=Proteobacteria RepID=Q5P855_AZOSE Length = 432 Score = 264 bits (674), Expect = 6e-69, Method: Composition-based stats. Identities = 101/445 (22%), Positives = 172/445 (38%), Gaps = 38/445 (8%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAK-AFVFQSVYAGKTLRMTIGNI 89 K T + R LPEGK F WD +V R + K +++ Q G++ R+TIG Sbjct: 2 TKLTKTYIDRLALPEGKDGEFHWDTEVKGFGLRVSPTGKVSYLMQGRVHGRSARITIGPH 61 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 + +D AR AR + GIDPR K A AE+ VT + Y+ Sbjct: 62 GVFTVDQAREVAREHLRSMRMGIDPREVAKQKKATAEAEAV----AGVTLQEVCDAYVSR 117 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 + + I H+ + + K P+A++ + + + Sbjct: 118 ------PGKLKASTQIEIKRHVATTFVAWKDK----------PIAAITEDDCRKRYREML 161 Query: 210 AAWLSTERQNR-PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 L +R P + +LRA I ++ Q K P L + K V+ + Sbjct: 162 TKGLRGDRDGGSPGQANQGFSVLRALINYAARQYKKADGSPLILRNPASALKDDWVALPE 221 Query: 269 ADDCLQKEQLKSWFSAVRSL-------NNPIASAYLQVLLLTGARREEIASLRWSDVDFK 321 + + ++ + ++A++ + + + LLLTGAR E A+L W V+ Sbjct: 222 RKTRIPESKIGAVWNALQQWRKVAYTRDTESSIDLVTFLLLTGARIGEAAALEWERVNLD 281 Query: 322 WSSMRIKDKIEGERI-IPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSA 380 + D + +PL+ +ELL + + +VF S + I +PR Sbjct: 282 EGWWHLPDPKNRNPVWLPLSTQAAELLKTRRR-----IKDNPFVFTSWGECKHISDPRDT 336 Query: 381 HNRALVLAELPHISLHGLRRSFGTLA-EWVEVPTGIVAQIMGHKPSALAEKHYRRRP-LD 438 + +A I+ H LRR+F T V + + H P + +HY L Sbjct: 337 MKKLSAVAGTK-ITPHDLRRTFTTFGIAQCSVELHKIELLTNHVPKGVTARHYLETSHLQ 395 Query: 439 LLRKWHEKIETWILNEAGITIKNNV 463 L+ ++I WI + I +NV Sbjct: 396 YLKPEVQRIADWIEEQGRIAKGDNV 420 >UniRef50_Q5ZWK0 Phage related integrase n=15 Tax=Proteobacteria RepID=Q5ZWK0_LEGPH Length = 414 Score = 264 bits (674), Expect = 6e-69, Method: Composition-based stats. Identities = 104/445 (23%), Positives = 191/445 (42%), Gaps = 55/445 (12%) Query: 31 QKFTFERLRRFTLPEG-----KKQTFLWDADVTTLACRATSG-AKAFVFQSVYAGKTLRM 84 K + LP+ Q +D ++ R TSG AKAF + K R+ Sbjct: 1 MKINKTNVENLPLPQAMEAGKTAQKRYYDDNLKGFGIRVTSGGAKAFFVEKFINKKRCRI 60 Query: 85 TIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWE 144 T+G+ + + A+ +A L I GIDP K +T + ++ Sbjct: 61 TLGHYPELTAEMAKNKALHLLGQIAMGIDPIAEKKATEV-----------RDITLNQVFK 109 Query: 145 DYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSEL 204 DYL +T++ R I ++ ++ + + P+ + Sbjct: 110 DYL---------RTRKNLKPRTIDNYTHILDKAFTH---------------WKSKPMLSI 145 Query: 205 TPDYIAAWLSTER-QNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKM-- 261 T D IA + ++ A R+LRA ++ Q Y+ L D V+++ Sbjct: 146 TRDRIAKYHEKLGNEHGEAYANLAMRILRALFNFAAGQ--YEDNSGHSLFIDNPVKRLSQ 203 Query: 262 --VPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVD 319 K ++ +L +W+++++ + N YL ++LLTG RR+E A+L+WSD+D Sbjct: 204 TRAWYRIEKRKTYIKSHELAAWYTSLQEIQNVTLRDYLLLILLTGLRRQEAATLKWSDLD 263 Query: 320 FKWSSMRIKDKIEGE-RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPR 378 K + I E +PL+ ++ +LL + +D ++F + +G IIEPR Sbjct: 264 LKAKTFTINTTKNNESHTLPLSDFLYDLLIARKEKAIND-----YIFPGSGTAGHIIEPR 318 Query: 379 SAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLD 438 + + + H ++H LRR+F T+AE +++P + ++M HK S+ Y ++ Sbjct: 319 KTMAHVIKNSGV-HFTVHDLRRTFITIAESLDIPAYALKRLMNHKMSSDVTAGYIIVDVE 377 Query: 439 LLRKWHEKIETWILNEAGITIKNNV 463 LRK + I +IL G+ ++ Sbjct: 378 RLRKPMQLITDYILKCVGVVKSADI 402 >UniRef50_B7S183 Site-specific recombinase, phage integrase family n=2 Tax=Proteobacteria RepID=B7S183_9GAMM Length = 421 Score = 260 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 113/448 (25%), Positives = 185/448 (41%), Gaps = 55/448 (12%) Query: 30 RQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAGK---TLRMT 85 R FT RL R PEGKK +++D V+ LA TS G K F+ GK ++ Sbjct: 4 RFNFTKSRLERLDCPEGKKLHYVYDEAVSGLAMYVTSAGTKKFLVYRKAKGKGNKPVKRG 63 Query: 86 IGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWED 145 +G +D+ARA A + ++ G +P + E+R+ K+T ++ Sbjct: 64 LGKFPAMSVDEARAGAIDAISQLNKGKNPN-----------ESEREARRLKITLDDVFKA 112 Query: 146 YLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 YL E +S T Y L + LS + Sbjct: 113 YLAERGNQLSENTVSNYKG-----------------------VVNKHLKDWKSKQLSSIN 149 Query: 206 PDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKY---QGIIPGDLAQDYNVRKMV 262 D +A + + + R+LRA ++N + + + P + Q Sbjct: 150 RDLVAKKHAKISKESQSAANKTMRVLRALFNYANGAYESSDGRSLFPDNPVQRL-THTRT 208 Query: 263 PVSASKADDCLQKEQLKSWFSAV------RSLNNPIASAYLQVLLLTGARREEIASLRWS 316 + D+ +++ QL+SWF AV YLQ +LLTG RR E SL+ + Sbjct: 209 WNREERRDNTIKRTQLESWFKAVLKLSESEDEFERTVGDYLQFVLLTGLRRREATSLKVA 268 Query: 317 DVDFKWSSMRIKDKIEGERI-IPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKII 375 DVDFK S I + + +P++ Y +LL D ++F SG++ Sbjct: 269 DVDFKERSFTIYLTKNHQPLSLPMSDYTLKLLK-----RRCDTTSTEYIFHGTGSSGRLN 323 Query: 376 EPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRR 435 +PR N V +E+ ++H LRR+F TLAE ++V + +++ H P Y R Sbjct: 324 DPRRLINTLRVSSEV-DFTIHDLRRTFITLAESLDVSAYALKRLVNHSPGGDVTAGYIRM 382 Query: 436 PLDLLRKWHEKIETWILNEAGITIKNNV 463 ++ LRK + I +IL A + ++ Sbjct: 383 DVERLRKPTQDINDYILKLAKVKKSADI 410 >UniRef50_Q5P749 Similar to phage-related integrase n=3 Tax=Bacteria RepID=Q5P749_AZOSE Length = 411 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 103/445 (23%), Positives = 171/445 (38%), Gaps = 59/445 (13%) Query: 29 SRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAF-VFQSVYAGKTLRMTI 86 +R FT ERL P+ K+ D T L R ++ G K+F V++ + AG+ R+T+ Sbjct: 6 TRFPFTKERLAALPTPDAGKRDTYHDTKTTGLQLRVSATGVKSFSVYRRLKAGQPERVTL 65 Query: 87 GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDY 146 G ++ AR A + I++G +P K AE T + + +Y Sbjct: 66 GKFPAMTVEQARKAAALVNAEIESGANPAATKRAFKAE------------PTLTEFFAEY 113 Query: 147 LQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTP 206 K P + D++ + N LSE+ Sbjct: 114 ---GTRHGEKKLAWPADVQRFRDYLQ---------------------KPMGNKRLSEIDR 149 Query: 207 DYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSA 266 IA LS + +V R +RA + G + + AQ V Sbjct: 150 AMIAKALSDAEKAGKSVA--TVRNIRALASGVFGKAVEWGRLDFNPAQGVKVAG----KK 203 Query: 267 SKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMR 326 D LQ ++L +F+AV + ++ + LLTGARR + ++ W ++D R Sbjct: 204 VSRDRFLQADELPRFFAAVAEED-DTMRDFILLALLTGARRANVCAMHWHELDLAAGVWR 262 Query: 327 IKDKIEGE-RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRAL 385 I GE + + L P +L D G+VF ++G ++EP+ A R + Sbjct: 263 IPRTKNGEPQTVTLCPEAVMILEA-----RKDATGGGFVFPGTGRTGHVVEPKKAVERVM 317 Query: 386 VLAELP-------HISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLD 438 A +P +LH LRR+ G+ I+ + + HK Y R LD Sbjct: 318 ARAGIPYGRDVPNGATLHDLRRTLGSWQARTGASLAIIGKSLNHKSQQATA-IYARLDLD 376 Query: 439 LLRKWHEKIETWILNEAGITIKNNV 463 +R+ + +L AG+ +V Sbjct: 377 PVRQSVNTATSAMLEAAGLKDGADV 401 >UniRef50_B3T0I4 Putative Phage integrase family protein n=2 Tax=root RepID=B3T0I4_9ZZZZ Length = 422 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 89/432 (20%), Positives = 166/432 (38%), Gaps = 37/432 (8%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMT 85 +A + R+ + T+ K + +WD +V+ CR +K ++ ++ G+ T Sbjct: 3 LATRHEGNVMARITKRTVDSLKPGSIVWDGEVSGFGCRCQVKSKVYMLKTAIGGRQRWFT 62 Query: 86 IGNIND-WKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWE 144 IG W ++ AR A+R+ I G DP + ++ K K T + E Sbjct: 63 IGRHGSPWTVEKARTRAKRIIGNIADGKDPAKDR------------DADKNKPTVAELCE 110 Query: 145 DYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSEL 204 YL++ + + I +H+ G+ ++ A + + Sbjct: 111 RYLEDYAKEHKKPSSLKSDQKNIENHV--------LPLLGREFVASVTFADIDRFK-RAV 161 Query: 205 TPDYIAAWLSTERQNRPTVTAH---AYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKM 261 + E Q P VT A R L K N +++ G R + Sbjct: 162 KDGKSSRERKPEHQGGPNVTGGKGVANRCLALLSKMFNLAERWGWCSVGS----NPCRHV 217 Query: 262 VPVSASKADDCLQKEQLKSWFSAVR--SLNNPIASAYLQVLLLTGARREEIASLRWSDVD 319 +K + L ++L + + NP A A +++L+ TGAR EI L W+ VD Sbjct: 218 DRYPENKREKFLSDKELAALAEVLNKSESENPYAVAAIRMLIFTGARLGEILHLEWAHVD 277 Query: 320 FKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRS 379 + + + + D G++ + L+ ++L L N+ V ++ + Sbjct: 278 MERAMLLLPDPKTGQKAVFLSAPALDVLANLPHMKNNPH-----VICGEKDGSHLVNLQK 332 Query: 380 AHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDL 439 R A L + LH LR SF ++A + ++ +++GH +A + Y D Sbjct: 333 PWGRIRKRAGLEDVRLHDLRHSFASVAASGGLSLPMIGKLLGHTQAATTAR-YAHLAADP 391 Query: 440 LRKWHEKIETWI 451 L+ +E I I Sbjct: 392 LKAANEAIGQRI 403 >UniRef50_C1SPM2 Site-specific recombinase XerD n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SPM2_9BACT Length = 397 Score = 255 bits (650), Expect = 4e-66, Method: Composition-based stats. Identities = 90/436 (20%), Positives = 163/436 (37%), Gaps = 62/436 (14%) Query: 29 SRQKFTFERLRRF-TLPEGKKQTFLWDADVTTLACRATSG-AKAFVFQSV-YAGKTLRMT 85 +++K T +R +G ++WD ++ A R T K++V + G+ MT Sbjct: 3 TKKKLTDAVVRNAKPATQGSGYYYIWDTELKGFALRVTGRPTKSYVIRYRNEEGRQKVMT 62 Query: 86 IGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWED 145 + ++ D+AR +AR T G D K + ++ + FS E Sbjct: 63 LFRASNITADEARRKARTKLTEAQGGTDILKEK------------QEKRKAMLFSEFAEI 110 Query: 146 YLQELRTGISA----KTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPL 201 YL+ ++ KT Y R I L + N PL Sbjct: 111 YLEHHARPNNSAGTVKTNESYLERLI-------------------------LPAFGNRPL 145 Query: 202 SELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSN-YQKKYQGIIPGDLAQDYNVRK 260 +TP+ A ++ P + LLR + ++ Q P Q Y Sbjct: 146 KSITPEDTAKLHHKIGKSTPVQANRVHALLRKMFTLAETWRYIPQNTNPCVHTQKYK--- 202 Query: 261 MVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYL--QVLLLTGARREEIASLRWSDV 318 + L ++ K + SA L ++L+ TG R+EEI +L+W ++ Sbjct: 203 -----ETPVQRFLTPDETKRLEDVLEKYEEKYYSAVLALRLLMYTGCRKEEILTLKWENI 257 Query: 319 DFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPR 378 + + + I GE+ +P++ V ++L + +V ++ ++I + Sbjct: 258 KNELNLLHIPKSKTGEKNVPVSHEVLDMLENAYKV-------NEYVCFGKFENSRLIGLQ 310 Query: 379 SAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLD 438 R A L + +H LR SF + A + +++++GHK E +Y D Sbjct: 311 KIWERLRKEAGLEDVRIHDLRHSFASTAISGGINIEFISKLLGHKRITTTEYYYAHVQND 370 Query: 439 LLRKWHEKIETWILNE 454 L + KI T I Sbjct: 371 PLHEAANKIATSITTA 386 >UniRef50_UPI00003841F3 COG0582: Integrase n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI00003841F3 Length = 394 Score = 254 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 81/414 (19%), Positives = 152/414 (36%), Gaps = 51/414 (12%) Query: 36 ERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAGKTLRMTIGNINDWKI 94 + + + + Q F WDADV R T+ GAK+F+ G+ R+TIG+ DW + Sbjct: 7 DAIAKRVSAGDRPQVFFWDADVKGFGLRVTNRGAKSFILDYRIGGRQRRITIGSYPDWSV 66 Query: 95 DDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGI 154 AR EA L+ +D G DP + + + T W+ Y R + Sbjct: 67 AAARTEAGNLKREVDLGNDPMGERH------------ADRAAPTMRDLWDRY---KRDHL 111 Query: 155 SAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLS 214 K R + + L +L + ++T I A Sbjct: 112 PRKAARSQADETMM-------------------WEKLVLPTLGKHKVGDVTHTDIEALHR 152 Query: 215 TERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQ 274 +R A R++ + N +++ I + + K L Sbjct: 153 DITVSR-GTPVRANRVIEVVRRAFNLAIRWEWI------EKNPASGQLRNPEEKRQRYLS 205 Query: 275 KEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFK---WSSMRIKDKI 331 E+L +A+ + + P+++ +++L+LTGAR+ E+ W D W+ K Sbjct: 206 PEELSRLSAALTAHHEPVSADAIRMLMLTGARKSEVLGATWEMFDLDAGVWTKPSAHTKQ 265 Query: 332 EGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELP 391 E +P++ LL + ++ + +VF + + + + A++ Sbjct: 266 RKEHRVPVSANALTLLKRIRETA-----EGPYVFPGKGGDQPLTDVKRSWAAVCKAADIT 320 Query: 392 HISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHE 445 +H LR SF +L I+ ++GH ++ Y + LR + Sbjct: 321 GARIHDLRHSFASLLVSGGASLPIIGAMLGHTQVQTTQR-YAHLYDEPLRAAAD 373 >UniRef50_C0GWH6 Integrase family protein n=3 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GWH6_9DELT Length = 394 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 78/434 (17%), Positives = 156/434 (35%), Gaps = 53/434 (12%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYA--GKTLRMT 85 + + T + K + +D+DV S K+ +Q G+ + Sbjct: 1 MPKIHLTPSFVSNPPRVRNKAKVDYFDSDVPGFIMEVRSTGKSTYYQRYRDKFGRLKQAR 60 Query: 86 IGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWED 145 I ++ +++AR +A+++++ G DPR AE + TF D Sbjct: 61 IAPVDSITLEEARQKAKQIRSQTTMGFDPRDE------------AEKNRNTPTFKEFIRD 108 Query: 146 -YLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSEL 204 Y+ +I + R + + L N+ +SE+ Sbjct: 109 QYI---------------------PYIQVHKRSWDQDSKMLELRV---LPLWGNMKMSEI 144 Query: 205 TPDYIAAWLST--ERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMV 262 T D + + S +P L++ + +I A+ + + Sbjct: 145 TRDDVQQFQSNFLRAGCKPGTVNRYMALVKYIFNLAEKWD----VIEKTPARHISRLE-- 198 Query: 263 PVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKW 322 + + L E+ K +++ + + +++L+LTGAR+ E+ +L W ++D K Sbjct: 199 --DNNCKERYLSSEETKRLLGELKNCKSQVVPDIIELLILTGARKSEVVNLPWQELDLKQ 256 Query: 323 SSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHN 382 I + + P L +L + + N +VF + G I + + Sbjct: 257 GLWTIPPERNKAKTRKTIPLSQGALRILEKRKH---NGSEYVFPNPKTGGPIKHFHNTWD 313 Query: 383 RALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRK 442 R A +P + +H LR +F +L V +++GH + ++ Y D LR Sbjct: 314 RVRKNAGIPDVRIHDLRHNFASLLVNSGRSLYEVQKLLGHSNISTTQR-YAHLTQDTLRD 372 Query: 443 WHEKIETWILNEAG 456 E + I N G Sbjct: 373 ATELAWSSIQNGQG 386 >UniRef50_D2LJU9 Integrase family protein n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LJU9_RHOVA Length = 393 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 88/444 (19%), Positives = 168/444 (37%), Gaps = 67/444 (15%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTI 86 ++ K T ++ + LWD V A +A +G+ +FV ++ G+ +TI Sbjct: 1 MAGIKITLTGVQAL-----SPGSTLWDGQVKGFAAKANANGSVSFVLKTRVNGRQRWVTI 55 Query: 87 GNIND-WKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWED 145 G W ++ AR EA RL +G D K K A + F + Sbjct: 56 GKFGSPWTVETARREALRLLGEAASGNDIGAEKQAKRA-----------KGLLFGHVADQ 104 Query: 146 YLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 ++ + +T+ Y T I H+ + P++++ Sbjct: 105 FIAIHFPKLKPRTRESYGT-IIRLHLK---------------------PAFGATPIADIR 142 Query: 206 PDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVS 265 +A + + + P HA +L + W+ Q A+ R + Sbjct: 143 KTSVATFHARHAET-PRNANHALSVLSKIMNWAEEQGLR-------PAESNPCRNIRKYR 194 Query: 266 ASKADDCLQKEQLKSWFSAV-----RSLNNPIASAYLQVLLLTGARREEIASLRWSDVDF 320 +K + L ++L +A+ +P A +++LLLTGAR EI +LRW+ VD Sbjct: 195 ETKRERYLSPDELARLGAALAAAEDDKTVDPYIIAAIRLLLLTGARLSEILTLRWTYVDT 254 Query: 321 KWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSA 380 + + D G ++IPL +LL L + +N +V + ++ + Sbjct: 255 YRRILNLPDSKTGAKVIPLNQAALDLLGTLPR-----LNSNPFVLVGRVEGQHLVNLQKP 309 Query: 381 HNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLL 440 R A L + +H LR SF +++ + ++ +++GH A ++ Sbjct: 310 WRRIRKEAGLDDVRIHDLRHSFASVSVGLGGSLPVIGRVLGHSQPATTARYAHV------ 363 Query: 441 RKWHEKIETWILNEAGITIKNNVD 464 +K+ ++ AG I + Sbjct: 364 ---ADKVAAELVEAAGALIGTALQ 384 >UniRef50_Q129B4 Phage integrase n=1 Tax=Polaromonas sp. JS666 RepID=Q129B4_POLSJ Length = 387 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 100/429 (23%), Positives = 170/429 (39%), Gaps = 53/429 (12%) Query: 30 RQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAF-VFQSVYAGKTLRMTIG 87 + +FT R+ K+ D + L R +S G K + V G R+TIG Sbjct: 4 KFRFTKPRIEALPPALPGKRDEYRDEALPGLWLRVSSAGVKTYAVLARKKGGALERVTIG 63 Query: 88 NINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYL 147 + ++AR +A+++ + TG+ + + A +++ + TF+ DYL Sbjct: 64 TADKLTPENARDKAKKIIADLATGV------------SHAASARAKRGETTFAELLTDYL 111 Query: 148 QELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPD 207 T + ++ Y Y H+ A L LS+++ + Sbjct: 112 SN--TTMKPRSLEAYQWLY-KKHVE---------------------ADLGKRKLSDVSVE 147 Query: 208 YIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSAS 267 I A ++ PT +++A W+ + Y G P + + + Sbjct: 148 RIRALHKKISKDTPTTANRCVSMVKAAFNWALKEGTYTGANPAGHVKKN--------TET 199 Query: 268 KADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI 327 LQ +L +F A+ P A ++ + LLTGARR + ++RW+D+ + RI Sbjct: 200 SRTRYLQPAELAIFFQALEESEEP-AKSFFMLCLLTGARRANVLAMRWADISLEDGIWRI 258 Query: 328 KD---KIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRA 384 K E IPL P LL L + WVF ++SK+G EP+ A Sbjct: 259 PAGDAKAGEEMNIPLVPEAVTLLTRL---KIEVADTSPWVFPADSKTGHYQEPKRAWATL 315 Query: 385 LVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWH 444 + L + +H LRR+ G+ T I A+ +GHK A + R +D +R Sbjct: 316 RRRSGLADLRIHDLRRTMGSWLVRTGANTAINAKALGHKSMQAAAVYQRIADVDPVRDAM 375 Query: 445 EKIETWILN 453 EK T + Sbjct: 376 EKATTAFMG 384 >UniRef50_A5CCP8 Phage-related integrase n=25 Tax=Orientia tsutsugamushi RepID=A5CCP8_ORITB Length = 414 Score = 248 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 89/436 (20%), Positives = 167/436 (38%), Gaps = 51/436 (11%) Query: 32 KFTFERLRRFTLPEGKKQTFLWDADVTTLACR----ATSG--AKAFVFQSVYAGKTLRMT 85 KF LR+ +P+G+K + D D+ L + G K ++ + Y ++L++ Sbjct: 9 KFINRALRKIKIPKGEKLLIIHDPDIIGLKLKISCTVCGGIVRKTWILEQKYKNQSLKIR 68 Query: 86 IGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTK---VTFSVA 142 I I +AR AR L+TL+ GIDPR K + E + + R+ K +TF Sbjct: 69 IVEFPYLSIKEARKIARELKTLMANGIDPRAVKHQQQIEENENRIKERERKANDITFKEL 128 Query: 143 WEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLS 202 Y++E + K AD ++ ++ +L +S Sbjct: 129 CYKYIEEYAKIYTINWKEN------ADRVHTYAQ------------------ALYEKKIS 164 Query: 203 ELTPDYIAAWLSTERQNRPTVTAHAY-RLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKM 261 ++ I + + TA+A LR + G+I + K+ Sbjct: 165 KIRMSDIEPIFNDISKEGKYATANALLATLRTIFNKAIKW----GLIENNPTLGIEQHKL 220 Query: 262 VPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFK 321 + L +++ + + +P+ + + L TGAR+ + + W ++DF+ Sbjct: 221 -----QARERRLSYDEMGRFLQVLCGEASPLIRDFALLALYTGARKSNVLEMEWDNIDFE 275 Query: 322 WSSMRIKDKIEGE-RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSN-SKSGKIIEPRS 379 I G+ + IPLT E+L ++ WV S+ S+SG + P + Sbjct: 276 RKIWHIPKTKNGKAQNIPLTDEAMEILQA-----RKLISTSKWVLPSSTSESGHLSHPNT 330 Query: 380 AHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDL 439 A A + + +H LRR+F + ++ + H Y ++L Sbjct: 331 AWKIICEKASIKNFRIHDLRRTFASCMGDAGESQRTISIALNHINPNST-IPYTIACMEL 389 Query: 440 LRKWHEKIETWILNEA 455 +R++ K I A Sbjct: 390 VREYMSKAIQIISECA 405 >UniRef50_A1AUY6 Phage integrase family protein n=2 Tax=Desulfuromonadales RepID=A1AUY6_PELPD Length = 402 Score = 248 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 92/441 (20%), Positives = 168/441 (38%), Gaps = 52/441 (11%) Query: 24 RKMALSRQKFTFERLRRFTLPEGK---KQTFLWDADVTTLACRAT-SGAKAFVFQSVYAG 79 R + FT + + + ++ D + L R + +G + F + Y G Sbjct: 5 RSNTSRKFPFTKKAIEALPAHDPASPSREMEYADIECIGLHLRVSKNGRRFFQHRYRYLG 64 Query: 80 KTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTF 139 + + +++G + DAR+ + L+ DP + A+ +TF Sbjct: 65 RKMCLSLGEFPAVSVQDARSRVAEHKALLARDKDPAAERGKVRAD------------LTF 112 Query: 140 SVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNL 199 +ST++ H + + K L L Sbjct: 113 EE--------------------FSTQHYLPHAKAHKQTWDDDKNQIERRLN---PILGKL 149 Query: 200 PLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVR 259 L +TP +A S E++ T A LL + N K+ G++ + A Sbjct: 150 RLQAITPRDVAMVHSKEKER--TTACTANHLLATLKRMLNLAVKW-GLLEKNPAGGQEKF 206 Query: 260 KMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVD 319 K P+ + L KE+L + A+ ++ ++ A L++LL TG RREEI SLRW +V Sbjct: 207 KEGPL----RERYLSKEELPKFLKALEDQDDLLSVAALRMLLYTGCRREEIMSLRWENVR 262 Query: 320 FKWSSMRIKDKIEGE-RIIPLTPYVSELLNVLAQSPNSD--VNKEGWVFRSN--SKSGKI 374 + + G R + L E++ L + + +VF S +K G I Sbjct: 263 LDEERIFLPKTKNGRSRTVHLNARAKEVIQDLQARKDQEDRTRGSEYVFPSRQGTKKGYI 322 Query: 375 IEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRR 434 + R +A + A + + +H LR +F ++A V +++GH+ A+ ++ Y Sbjct: 323 YDLRKPFEKACLNAGIDNFRIHDLRHTFASMAVSSGADLYAVQRLLGHQDIAMTQR-YAH 381 Query: 435 RPLDLLRKWHEKIETWILNEA 455 D L+K E + A Sbjct: 382 LNADDLKKATEGVSEMFDRAA 402 >UniRef50_B5K270 Integrase n=1 Tax=Octadecabacter antarcticus 238 RepID=B5K270_9RHOB Length = 389 Score = 248 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 90/434 (20%), Positives = 160/434 (36%), Gaps = 54/434 (12%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAGKTLRM 84 MA FT L K+ + +D L T G K+F G+ R+ Sbjct: 1 MASFEINFTKAALTGAAPAAKGKRDYYYDGKEKGLVLAVTPAGGKSFYLYKRIDGRPERL 60 Query: 85 TIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWE 144 +G D +++AR A + I G +P+ AK S + ++TF + Sbjct: 61 LLGKFPDLTVENARKLAASAKGEIAMGENPQKAKR------------SIRDEMTFGALFT 108 Query: 145 DYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSEL 204 +YL++ H + R +R L +S + Sbjct: 109 EYLEK--------------------HSKVHKRSWAYDEREVNKF----LKHWFKRKISSI 144 Query: 205 TPDYIAAWLSTE-RQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVP 263 + + ++N +R+ + + G+ P + Y Sbjct: 145 EKPEVERLHAKVGKENGLYQANRLLERIRSIFSKATDWG-WNGVNPATGIKKY------- 196 Query: 264 VSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWS 323 D LQ E+L +F A+ + N +A + + LL GAR+ ++RW ++ F Sbjct: 197 -REKSRDRFLQPEELPRFFEALSNEPNEVARDFFMISLLAGARKSNTLAMRWDEISFHGE 255 Query: 324 SMRI-KDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHN 382 + RI + K + +I+ L+P E+L + WVF + SG + +P+ A Sbjct: 256 TWRIARTKNDDPQIVHLSPQAMEILKERKLH-----SLSPWVFPGDGASGHLADPKKAWM 310 Query: 383 RALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRK 442 R L A + + +H LRR+ G+ + I+ + +GH+ Y R LD +R Sbjct: 311 RILKEAGIADLRIHDLRRTLGSWQAATGANSYIIGKSLGHRSQQSTA-VYARLNLDPVRD 369 Query: 443 WHEKIETWILNEAG 456 K +L G Sbjct: 370 SVNKATDAMLGYMG 383 >UniRef50_A1B6Q9 Phage integrase family protein n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1B6Q9_PARDP Length = 393 Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 73/414 (17%), Positives = 153/414 (36%), Gaps = 53/414 (12%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNI 89 K T + +++ FLWD ++ R SG K ++ Q G++ R+ IG Sbjct: 2 TKITKRSVDAAA--PAEQEFFLWDEELKGFGLRVYPSGRKMYLAQYRAGGRSRRVNIGLH 59 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 + AR EA + + + G DP + + A Sbjct: 60 GAMTPEMARTEAMKYLSDVRLGADPAGERDRRKASP------------------------ 95 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 T + +S R+++DH+ L + + + + + ++T + Sbjct: 96 --------TIKEFSKRFLSDHVALHCKASTYGEYERSIDLFIN-PRFGSHRIIDITRADV 146 Query: 210 AAWLSTERQNRPTVTAHAYRLLRAFIKWS-NYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 + R + P +L + + + G+ P K+ K Sbjct: 147 VGLHQSMR-HIPYQANRTLGVLSVMFTVAHAWGVRTDGVNPCW--------KVKRYREEK 197 Query: 269 ADDCLQKEQLKSWFSAVR-SLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI 327 + L ++L + + P A+ +++LLLTG R EI +L+W VD++ +R+ Sbjct: 198 RERYLTPDELARLGKVLDCATEEPEAANCIRLLLLTGCRLSEIQTLKWRYVDYRNGLLRL 257 Query: 328 KDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVL 387 D G +++P+ ++L + + ++ +V + + + + R Sbjct: 258 PDSKTGAKLVPIGKAAIKVLKTIPK-----IDGNPYVITGRMEGQHLTDMQKPWRRLRKR 312 Query: 388 AELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLR 441 A L + +H LR SF + A + ++ +++GH + Y D +R Sbjct: 313 AGLDDLRIHDLRHSFASDALQLGQDLTMIGRLLGHTQVQTTAR-YAHLKTDPVR 365 >UniRef50_C5SDM2 Integrase family protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SDM2_CHRVI Length = 398 Score = 245 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 92/436 (21%), Positives = 152/436 (34%), Gaps = 50/436 (11%) Query: 31 QKFTFERLRRFTLP-EGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGN 88 T + + + G ++ +WD D R SG KAFV G+ MTIG Sbjct: 1 MGLTKKTIDALSYQGAGNERFVVWDDDPPGFGLRIYPSGRKAFVLSYRSQGRKRLMTIGT 60 Query: 89 INDWKIDDARAEARRLQTLID-TGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYL 147 +D AR +AR ++ G DP + + TF + Y+ Sbjct: 61 YGVLTLDQARIQARAELAKVETQGADPLAVRQRQ------------AQGETFRDLCQTYM 108 Query: 148 QELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPD 207 + AK R I H+ L +L + +T Sbjct: 109 ERH---GQAKKSGTDDQRRIDRHL---------------------LPLWGSLKVPAVTRA 144 Query: 208 YIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSAS 267 +AA S + P LL + + G +P R + + Sbjct: 145 DVAALHSKIGKAHPYEANRVLALLSKMFDLA----RRWGFVPEGH--PNPARDIDRFKEA 198 Query: 268 KADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI 327 K D + E+L A+ N A L + LLTGAR+ E+ RW DVD+ + +RI Sbjct: 199 KRDRWVTPEELPRLAQAINEEPNQSARFGLWLYLLTGARKSELLRARWDDVDWTRAELRI 258 Query: 328 KDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVL 387 D G + P + L +L + P N + ++ +R Sbjct: 259 PDTKAGR--VHYIPLSAAALALLREIPRVAGNPH--ILPGKLDGAHLVNINKPWDRVRRA 314 Query: 388 AELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKI 447 A + + +H LRR+ G+ ++ +++ H + Y R D +R E+ Sbjct: 315 AGVEDVRVHDLRRTVGSWLAQAGNSLHLIGRVLNHSNQSTTA-IYARFGEDSVRAALEQH 373 Query: 448 ETWILNEAGITIKNNV 463 I+ AG+T +V Sbjct: 374 GARIIGAAGLTPSADV 389 >UniRef50_B5EC35 Integrase family protein n=1 Tax=Geobacter bemidjiensis Bem RepID=B5EC35_GEOBB Length = 486 Score = 243 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 95/474 (20%), Positives = 166/474 (35%), Gaps = 57/474 (12%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIG 87 + T + + P + + +D + R + K + GK +R I Sbjct: 1 MPTIHITKTAIDKLERP-AEGRVDYFDDALRGFGIRVSPSTKTYFVMRRVNGKLVRAKID 59 Query: 88 NINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTK---VTFSVAWE 144 + + AR A + G DP K E + E K VT A + Sbjct: 60 TADKITAEQARKRAEGALADMGRGQDPNEEKRAAKKRTEDARKEEEAQKSQVVTLEDALK 119 Query: 145 DYLQELRTGISA-KTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSE 203 YL++ + T + +++D + L + S Q T + Sbjct: 120 VYLEKRKLKPKTLATYKQLFRLHLSDWLQLPAGEITSTMVAQRHTDIAT----GARNRTA 175 Query: 204 LTPDYIAAWLST---------ERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQ 254 L + + Q R R+LRA + ++ + GI+ + + Sbjct: 176 LKKAVVDKGKGKPKVEKSKVPDSQRREASADGTMRVLRAVLNYTFGDDEELGIVRPNPVR 235 Query: 255 DYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLR 314 + RK + + ++ L +W AV +L N +A YL LL TG RR E A L+ Sbjct: 236 TLS-RKKAWYKVPRRRNLIKNSDLPAWSKAVLALENAVARDYLLFLLHTGLRRNEAACLQ 294 Query: 315 WSDVDFKWSSMRIKDKIEGE-RIIPLTPYVSELLNVLAQSPNSDVN-------------- 359 W VDF+ I D E +PL+ Y+ LL + +++ Sbjct: 295 WQHVDFEDGCFTIIDTKNKEPHTLPLSDYLHTLLEGRKEGLKTELEAAKAALEASLHSPE 354 Query: 360 ---------------------KEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGL 398 + +VF + ++G I +P+ A + S H L Sbjct: 355 YLTPKQRQAFRNRVAAAESRLQSPYVFPGSGRAGYIADPQKALEAVTQATGII-FSCHDL 413 Query: 399 RRSFGTLAEWVEVPTGIVAQIMGHK-PSALAEKHYRRRPLDLLRKWHEKIETWI 451 RR+F T+AE +++ + ++ HK S Y D LR+ +K+ I Sbjct: 414 RRTFATIAESLDLSKYTIKALLNHKEQSGDVTGGYIILNADRLREPMQKMTDAI 467 >UniRef50_C6XR20 Integrase family protein n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XR20_HIRBI Length = 402 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 95/431 (22%), Positives = 158/431 (36%), Gaps = 44/431 (10%) Query: 30 RQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKA--FVFQSVYA--GKTLRMT 85 + KFT L+ +K+ WD+++T R K FV QS + G TL +T Sbjct: 2 KIKFTLSNLKALK--PSEKRYVCWDSELTGFGARVQPSGKVVFFVRQSRFTETGTTLDIT 59 Query: 86 IGNIND-WKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWE 144 IG + W +AR++A L + GIDPR E T ++ + Sbjct: 60 IGALGQPWTPSNARSQATLLLLQLKQGIDPR-----------KKTNEINYTIASYFEVFC 108 Query: 145 DYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSEL 204 + + K + R+I+ H+ G+ K + T S + P ++ Sbjct: 109 GQTNGRKKPRTIKLEESLFKRHISPHL------GKVKLKELNTTHISNFMSKVANP-DKI 161 Query: 205 TPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPV 264 + A+ +L A + + L + + Sbjct: 162 IVEKTKPRGKAVVSGGKPTANRAHDILSAMLNHAVKAG---------LLDKNPAKNVAKF 212 Query: 265 SASKADDCLQKEQLKSWFSAVRSLNNP----IASAYLQVLLLTGARREEIASLRWSDVDF 320 K + L + +++ +R + A L+VL+ TGAR+ EI SLRW +D+ Sbjct: 213 RTEKKERFLTEVEIQRLGQELRQAGSDGTNTYAIEALKVLMFTGARKSEILSLRWEYIDW 272 Query: 321 KWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSA 380 + S + D + I L V +LN L GWVF SN + + Sbjct: 273 QRSLANLPDSKNDMKSIVLPSVVISILNNLPNK-----GTNGWVFPSNDGNTHFTGLQKI 327 Query: 381 HNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLL 440 NR A L + +H LR +F ++ I+ + + H A ++ Y D L Sbjct: 328 WNRIRTNANLRDVRIHDLRHTFASVGAAEGKSLYILGKALTHANPATTQR-YAHLADDPL 386 Query: 441 RKWHEKIETWI 451 R E I I Sbjct: 387 RHAVEAISNKI 397 >UniRef50_A3V904 Phage integrase n=5 Tax=Rhodobacteraceae RepID=A3V904_9RHOB Length = 445 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 88/441 (19%), Positives = 156/441 (35%), Gaps = 51/441 (11%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLA--CRATSGAKAFVFQSVYAGKTLRMT 85 + T + + P K++ +D V L R + G ++ + KT + Sbjct: 1 MPVIDLTAQFVASAVCPSTKRKEVFFDRRVKGLVLEVRTSGGMTYYMRYTDDRSKTRYIK 60 Query: 86 IGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWED 145 + N+ D + AR R+ + + GIDP +AVK + TF D Sbjct: 61 LANVGDITLPQARGLCRQHRNKLALGIDPLAERAVK------------RLVPTFG----D 104 Query: 146 YLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 +++E + KR + T +L+ L + + E+T Sbjct: 105 FVRERYLPFAQANKRSWKTDETLARTHLT-------------------PQLGTMHMDEIT 145 Query: 206 PDYIAAW--LSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVP 263 + + + + + P LLR + K G+ G+ + K Sbjct: 146 IEDVLSLQQIGLKAGAAPASINRRLILLRYMFNLAWRDWKIAGVT-GNPTHGVRLLKE-- 202 Query: 264 VSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWS 323 ++ + ++ E+L + AV+ N + + LLLTG RR E+ W DVD Sbjct: 203 --NNQKERYVRAEELALLYRAVKESQNKMLQHIVAFLLLTGTRRNEVLHATWEDVDLIKG 260 Query: 324 SMRIKDKIEG-ERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHN 382 RI G R +PL +L + S ++F + + A N Sbjct: 261 MWRIPQTKSGFARHVPLNDGAYAVLQQMQGRSQSH-----YIFGNPKTGKPYVHVWYAWN 315 Query: 383 RALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRK 442 A V A LP + LH LR +F +L V +++GH ++ Y + L Sbjct: 316 SARVKAGLPDVRLHDLRHTFASLLINNGRSIYEVQKLLGHTQIKTTQR-YAHLTQETLLD 374 Query: 443 WHEKIETWILNEAGITIKNNV 463 + G+ + NV Sbjct: 375 ASNIGTAAVAATLGMVPQRNV 395 >UniRef50_A1AQX4 Phage integrase family protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AQX4_PELPD Length = 389 Score = 241 bits (614), Expect = 5e-62, Method: Composition-based stats. Identities = 99/437 (22%), Positives = 172/437 (39%), Gaps = 54/437 (12%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAGKTLRMTI 86 + + T +R+ P KQ +WDA+ A R + G K F GK +R T+ Sbjct: 2 PEKIRLTQKRVADLQ-PVAGKQFDVWDAEQPRFAVRVSPRGRKTFFVMRRVKGKLVRATV 60 Query: 87 GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDY 146 G + +D AR A + + G++P I + + +A+ + S ++ Y Sbjct: 61 GTFPEMNVDTARKMAAEMLVSMTAGVNPNIERKRE-------RAQQKDKSRLLSAVFDSY 113 Query: 147 LQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTP 206 L K + R L L + E+ Sbjct: 114 LASGGKDGDIKASTKAAYRSAFRR----------------------LEKWQELKIDEIES 151 Query: 207 DYIAAWL-STERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVS 265 + + S + H+ LLRA +K++ + G+ A D K P Sbjct: 152 EMVEQLHVSIVKDCGGYAANHSIGLLRALMKFAK--------VEGNPAADVAWAKETP-- 201 Query: 266 ASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSM 325 + + E + + A+ L S +VLL TG R+ E LRW D+D + S+ Sbjct: 202 ---RREAMPPEAIPGFLKALDQLKGDNGSDLFRVLLFTGMRKSEAMGLRWIDIDLENKSL 258 Query: 326 RIKDKIEGERI-IPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRA 384 I++ G + IP++ +++ +L + +S WVF SNS+ G + + Sbjct: 259 HIEETKTGPPLNIPISGHLAAILEKRKERISS-----PWVFPSNSRVGHLTNDQQFCREL 313 Query: 385 LVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWH 444 L + H LR++F T+A + +P +V + GH P + +HY + LR Sbjct: 314 AALG--VRVYPHLLRKTFTTIAASL-IPGAMVDCLTGHVPQDVTGRHYTFPSVGQLRPHT 370 Query: 445 EKIETWILNEAGITIKN 461 E + IL+ AGIT ++ Sbjct: 371 EAVTKEILSLAGITTRS 387 >UniRef50_Q1GLB2 Phage integrase n=12 Tax=Rhodobacterales RepID=Q1GLB2_SILST Length = 411 Score = 240 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 77/432 (17%), Positives = 148/432 (34%), Gaps = 59/432 (13%) Query: 32 KFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNIN 90 K T + K FLWD+ + R SGAK + Q G+T R+++G Sbjct: 22 KLTKRTVEALM--PEAKDYFLWDSQIAGFGVRVMPSGAKTYQAQYRKGGRTRRVSVGRHG 79 Query: 91 DWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQEL 150 +D+AR A+ + + G +P + + + T + E + + Sbjct: 80 KITVDEARKLAKEIMGQVAKGENP------------AEEISQHRKAPTVAALCERFFEAH 127 Query: 151 RTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIA 210 + + R I + +L + + ++ IA Sbjct: 128 AKERCKPSTQKEYRRAID---------------------LFIVPALGSFKVVDVERRDIA 166 Query: 211 AWLSTERQNRPTVTAHAYRLLRAFIKWSN-YQKKYQGIIPGDLAQDYNVRKMVPVSASKA 269 R +P +L + + + G P R + K Sbjct: 167 ELHHKFRD-KPHQANRTLGVLSKMFNLAEIWGLRPDGSNPC--------RHVPKYREVKR 217 Query: 270 DDCLQKEQLKSWFSAVRSLNN-----PIASAYLQVLLLTGARREEIASLRWSDVDFKWSS 324 + L + +L+ + + P A ++L+LTG R EI +L+W + + Sbjct: 218 ERFLSQSELQRLGQVLTEVEREGSETPHMVAAFRLLILTGCRLGEIQTLKWGYI--TANG 275 Query: 325 MRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRA 384 M + D G R IPL ++L L ++P +V + + R Sbjct: 276 MELPDSKTGARRIPLPQPARDVLARLPRTP-----GHPYVIEGKLPGQYATDLQHPWRRI 330 Query: 385 LVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWH 444 A L + +H LR ++ + A +P +V +++GH + Y D +R+ Sbjct: 331 RDRAGLCGVRIHDLRHTYASNAVSAGMPIQMVGRLLGHTQIQTTMR-YAHLADDPVRQAA 389 Query: 445 EKIETWILNEAG 456 E+ + + G Sbjct: 390 EENAARLGSMVG 401 >UniRef50_Q7WFY2 Phage-related integrase n=1 Tax=Bordetella bronchiseptica RepID=Q7WFY2_BORBR Length = 424 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 98/454 (21%), Positives = 166/454 (36%), Gaps = 54/454 (11%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTI 86 + +K T + + P Q F W + A R T SGAK+++ Q KT R TI Sbjct: 2 PTVKKLTKQVVDGLPTP-ATGQAFHWCSVTPGFAVRVTASGAKSYIVQGRVNSKTCRYTI 60 Query: 87 GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDY 146 G D+AR A + G++P++ + + A+ VT EDY Sbjct: 61 GPCELLGTDEARKRALARLLEMHDGMNPQVERKRRQAQG-----------VTLREVMEDY 109 Query: 147 LQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTP 206 ++ RT +S + LA + P++ +T Sbjct: 110 VENKRTK--------------------HGTLRDSSQADIKRCVTQHLADWADKPVASITR 149 Query: 207 DYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNV---RKMVP 263 + PT +R LRA W+ L + V + + Sbjct: 150 EACVKRFRELSATAPTTANQVFRNLRALCNWARETNVAPDGSYPILPINPVVQAFKSVTW 209 Query: 264 VSASKADDCLQKEQLKSWFSAVRSLNNP--------IASAYLQVLLLTGARREEIASLRW 315 ++ + ++ + ++ + +N A+ + L+LTGAR E ++L W Sbjct: 210 NKEVTREEFVPLAKVGAVWNMLAERSNAQIYTTADVTAAHLVMFLILTGARIGEGSALHW 269 Query: 316 SDVDFKWSSM---RIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKS- 371 DV + K E IPL+ + LL + D E +VF S + + Sbjct: 270 KDVRLDDEVPSFTFTQTKNHNEVTIPLSTQLHALLAARYSARRPD---EEYVFPSRTGTR 326 Query: 372 -GKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEK 430 + + R R +A L H+ H LRR+F +A V + H P + K Sbjct: 327 EPHMQDARGTMQRVSKIAGL-HLHNHDLRRTFLAIAIECGVEMWKAEILTNHLPQTVTLK 385 Query: 431 HYRR-RPLDLLRKWHEKIETWILNEAGITIKNNV 463 HY + R L L+ +++ WI +A + NV Sbjct: 386 HYTQTRDLRYLQADTQRVADWITKQAQVASGQNV 419 >UniRef50_Q3SUE5 Phage integrase n=6 Tax=Alphaproteobacteria RepID=Q3SUE5_NITWN Length = 400 Score = 238 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 78/427 (18%), Positives = 149/427 (34%), Gaps = 56/427 (13%) Query: 33 FTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGA-KAFVFQSVYAGKTLRMTIGNIND 91 T ++ +K ++D +V R TSG +AF+ + R+TIG D Sbjct: 5 LTERNVKGLQ--PKQKNIIVYDEEVVGFGVRITSGGTRAFILTYRIEARERRLTIGAWPD 62 Query: 92 WKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELR 151 W + AR EA+RL+ ID G DP + + + + YL+E Sbjct: 63 WSVTAAREEAKRLKREIDQGRDPMAER------------DEARESPNVRQLIDRYLEEHA 110 Query: 152 TGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAA 211 + ++ + + ++ + +E+ PD + Sbjct: 111 SKLAKRNRDDQAS----------------------MLRKLVEPAWGPRKAAEIQPDDVDR 148 Query: 212 WL---------STERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMV 262 L R+ P +LR + I + D Sbjct: 149 LLCQIAGGTLGKRGRKPTPVRANRVGEILRKMFNLA---------IRWRIRTDNPAAGFA 199 Query: 263 PVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKW 322 + + D L +++ +A+ + N A+ ++++LLTGARR E+ RW D Sbjct: 200 RNAEAPRDRYLSTDEIGRLSAALDAHPNRRAADAVRLILLTGARRGEVLGARWDQFDLDA 259 Query: 323 SSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHN 382 + +R + P + +L WVF +++ + + + Sbjct: 260 AVWIKPAATTKQRRLHRAPISASAAALLRTIRLRVPKDCEWVFPGDAEGKPLQDIKRFWE 319 Query: 383 RALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRK 442 AELP + H LR +F +L + ++ +++GH ++ Y D LR Sbjct: 320 DVRTKAELPAVRTHDLRHTFASLLVSGGMTLPMIGKLLGHTQVQTTQR-YAHLLDDPLRA 378 Query: 443 WHEKIET 449 E++ Sbjct: 379 GLEQVGD 385 >UniRef50_Q1RJE3 Integrase n=9 Tax=Rickettsia RepID=Q1RJE3_RICBR Length = 388 Score = 238 bits (606), Expect = 4e-61, Method: Composition-based stats. Identities = 86/418 (20%), Positives = 150/418 (35%), Gaps = 55/418 (13%) Query: 33 FTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTIGNIND 91 FT E L+ PE K+ + D L + G+K F V + K R+ IG Sbjct: 13 FTKEMLQEIKAPEAKRDIYK-DTKEKGLLLIVSYGGSKIFYLGVVLSKKYHRIKIGVFPY 71 Query: 92 WKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELR 151 I DAR +A L+ I G +P KA E TF ++ YL E Sbjct: 72 LSIIDARLKASELKGKIAQGYNPIEEKARLSKE------------PTFKEFYDRYLDE-Y 118 Query: 152 TGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAA 211 + I+ K + Y+ +L N +S + I Sbjct: 119 SKINNKRWKDYAASVDRYAKHLY-----------------------NRKISTIQKADIQE 155 Query: 212 WLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADD 271 + + +L + I +L V + D Sbjct: 156 LFNKLTKTGKYGANRFLEVLSPVFSKA---------IEWELLTVNPVIGIKKHKEQSRDR 206 Query: 272 CLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKI 331 L +E++ +F+A+ N + + + L T R++ + ++RW + F + + D Sbjct: 207 YLTREEIPRFFTAISEEQNQVMKDFFLIALYTSVRKDNVLTMRWEQISFADKQLYLPDTK 266 Query: 332 EGE-RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRS-NSKSGKIIEPRSAHNRALVLAE 389 G+ +PL E+L + +S WVF S S SG + EP+ A R A Sbjct: 267 NGDPHRLPLLDQAVEILKARKEQSDSI-----WVFPSETSSSGHLQEPKKAWKRICKKAG 321 Query: 390 LPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKI 447 + ++ +H LRR+ + ++ Q++ H+ Y R D R++ ++ Sbjct: 322 IENLRIHDLRRTIPSWMAMTGANQYVIGQLLNHRDPRSTA-VYTRLATDTAREYMQRA 378 >UniRef50_A4VJM8 Integrase n=2 Tax=Gammaproteobacteria RepID=A4VJM8_PSEU5 Length = 467 Score = 237 bits (605), Expect = 6e-61, Method: Composition-based stats. Identities = 93/490 (18%), Positives = 171/490 (34%), Gaps = 102/490 (20%) Query: 29 SRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAF-VFQSVYAGKTLRMTI 86 + F+ ERL PE K+ D + L R + SG K F +++ + G+ R+T+ Sbjct: 5 THIAFSKERLLALPPPEAGKRATYHDTKIQGLQLRVSPSGVKTFSLYRRMKGGQPERVTL 64 Query: 87 GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDY 146 G ++ AR A + I+ G +P A+ + + + +F ++D+ Sbjct: 65 GRFPAMTVEQARKHASAVNAEIEAGGNPAAARR------------AIRVEQSFGEVFDDF 112 Query: 147 LQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTP 206 L++ R GE KR L + LS++T Sbjct: 113 LKKKRKRDGT-------------------PLGERTKRDYSDVLRLYLEPIKARKLSQITR 153 Query: 207 DYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSA 266 I A + + A ++ + ++ + ++G P Q + A Sbjct: 154 ADIKAIHAKVTKRSAAQADRALAVVSSVFSYAADMELFEGTSPASRIQKNH--------A 205 Query: 267 SKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMR 326 D Q +L F A+ + S + + LLTGARR + ++ W D+D + R Sbjct: 206 PSRDRFAQGVELPYLFEAIGESS---LSDFFLLALLTGARRSNVQAMAWRDLDLEAHVWR 262 Query: 327 IKDKIEG-ERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRAL 385 I G + + L+P +L Q+ ++ +VF + K+G ++EP+ A L Sbjct: 263 IGMTKNGTPQNVTLSPEAVSVLRARKQTSSA----SAFVFPGDGKTGHLVEPKKAWAAIL 318 Query: 386 VLA----------------------------------------------------ELPHI 393 A ++ + Sbjct: 319 RRASMRRLLDCMEELGKLTAEERQQANAEVIVAAAAAEERYRGIADTLNIDPALYDMTDL 378 Query: 394 SLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWILN 453 +H LRR+ G+ I+ + + HK Y R LD +R+ +L Sbjct: 379 RIHDLRRTLGSWQAKTGASLSIIGKSLNHKTHQATA-IYARLDLDPVRQSVNTATQAMLA 437 Query: 454 EAGITIKNNV 463 AG+ +V Sbjct: 438 AAGMKQAASV 447 >UniRef50_A6X736 Phage integrase family protein n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X736_OCHA4 Length = 420 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 96/449 (21%), Positives = 168/449 (37%), Gaps = 49/449 (10%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWD---ADVTTLACRATSGAKAFVFQSVYAGKTLRMTIG 87 T + T T LWD V R A+ F+ + G++ M+IG Sbjct: 1 MPITKNDVDGLT-----PDTILWDDGRGSVAGFGVRRQRVARVFILKYSVRGRSRWMSIG 55 Query: 88 NIND-WKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDY 146 W ++ AR EA+RL L+ +G DP A+ + S + +T + +DY Sbjct: 56 KYGSPWTVETARLEAKRLLGLVASGGDPAAARD---------EQRSAEGPLTVAELCDDY 106 Query: 147 LQELRTG-ISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 ++ R G I + RP + + R K + ++ + ++T Sbjct: 107 MKAARAGAILTRFHRPKKESTLQIDVGRIERHI--KPLIGKKHVIEVDSKVVKRLIHDIT 164 Query: 206 PDYIAAWLSTERQNRP------TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVR 259 A + T + R A LL + W+ + L +D V Sbjct: 165 VGKTATSIKTGTRGRAIVTGGAGSAARVADLLSGIMTWAVDEG---------LIRDNPVH 215 Query: 260 KMVPVSASKADDCLQKEQLKSWFSAV-------RSLNNPIASAYLQVLLLTGARREEIAS 312 ++ L + +LK + + A + +L+LTG R EIAS Sbjct: 216 RVRRYRGQPRQRFLSEVELKQLGKVLSAGRDCNEKAIHRYALTVVHLLVLTGCRLNEIAS 275 Query: 313 LRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSG 372 LRWS+VD +R+ D G+ + + +++L+ + + SD WVF G Sbjct: 276 LRWSEVDLSQRCLRLGDTKTGQSLRAIGSAATKILSNIDKLSGSD-----WVFPGARGDG 330 Query: 373 KIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHY 432 + R AEL +++ H LR ++ + A G +A ++GHK + ++ Sbjct: 331 PYQGTKREAARIFQTAELDNVTCHTLRHTYASFASGCGYSDGTIAGLLGHKGRGVTSRYI 390 Query: 433 RRRPLDLLRKWHEKIETWILNEAGITIKN 461 R LL E + I +T + Sbjct: 391 HRPDSALL-AAAEDVSEHIKGLLNVTSND 418 >UniRef50_B3E293 Integrase family protein n=1 Tax=Geobacter lovleyi SZ RepID=B3E293_GEOLS Length = 409 Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 93/438 (21%), Positives = 170/438 (38%), Gaps = 55/438 (12%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLR--MT 85 + K T L+ P Q +D ++ RAT A F ++ G + + + Sbjct: 1 MPSLKITKANLKEIVKPTA-GQVDYFDTELAGFGVRATKEALTFFVRARQRGTSKKPFIH 59 Query: 86 IGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWED 145 IG + + ARA+A + GI+P + K+ +T + Sbjct: 60 IGAFGLYTCEQARAQATGYLQKLKEGINPHPDRQPKLV------------TITVADLHRQ 107 Query: 146 YLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 Y+ +T ++ T R Y+ ++ +H L LP +T Sbjct: 108 YMSTKKT-LAPATIRQYAA-WMENHFK----------------------DWLTLPADTIT 143 Query: 206 PDYIAAWLS-TERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYN-VRKMVP 263 + L E N + +A +LLR+ ++ + G+I + VR+ Sbjct: 144 GSMVLERLELMEITNGKSQAINAVKLLRSLFRFGL--ALHPGVIHRNPVDGVREVRERDW 201 Query: 264 VSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWS 323 + ++ E L WF AV + +NP Y+ +LL TG RR E A L+WSD+DFK Sbjct: 202 AKKKRRITFIKPEDLPIWFKAVNAYDNPKGRDYMLLLLYTGLRRNEAARLKWSDIDFKRK 261 Query: 324 SMRI-KDKIEGER------IIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIE 376 + +K GE+ +P++ + +LL + + ++F + + Sbjct: 262 AFTFTPEKKRGEKPEDDQVTMPMSEQLYKLL----LKRRAAGYENEYIFPGKHPAPFLSN 317 Query: 377 PRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRP 436 P + + + + H LRR+F T+AE ++VP + ++ H Y + Sbjct: 318 PDNYKRDIIAASGV-QFCFHDLRRTFITIAEGLDVPHYSLKALLNHSMGNDVTGGYIQIT 376 Query: 437 LDLLRKWHEKIETWILNE 454 + LR+ +KI I Sbjct: 377 TERLREPMQKIADRITEL 394 >UniRef50_A4TWM2 Phage integrase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TWM2_9PROT Length = 387 Score = 235 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 81/411 (19%), Positives = 144/411 (35%), Gaps = 57/411 (13%) Query: 30 RQKFTFERLRRFT-LPEGKKQTFLWDADVTTLACRA--TSGAKAFVFQSVYAGKTLRMTI 86 + K T ++ LP G+++ + D +VT T G + + AG++ + I Sbjct: 2 KAKITAALVKAPPPLPHGQRKLRITDTEVTGFVMEVWPTGGITFWCKYTDPAGRSREVKI 61 Query: 87 GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDY 146 G D ++ AR +A+ L+ + DP K + + TF + Sbjct: 62 GKAADISVEQARRKAKELRAQVALSGDPAGDK------------DKHRAVPTFK----AF 105 Query: 147 LQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTP 206 + E + R YS + + L + + L E+ Sbjct: 106 VTEQYLPFAKDRLRSYSDQESMCRLRL-------------------IPTWGAKRLDEIRT 146 Query: 207 DYIAAWLSTERQN--RPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPV 264 I R P+ L + + + Y+G P + Sbjct: 147 TDIVELQRRLRDENLSPSTVNRHVALAKRVFNLALRWQAYEGRNPCQHVEF--------A 198 Query: 265 SASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSS 324 + + L ++++ F A+ + A+ + +L LTGAR+ E + R+ D+D Sbjct: 199 REHQRERFLTPDEMRRLFQALDDEPSRSAANCIALLALTGARKSEALNARFDDIDLPNRV 258 Query: 325 MRI---KDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAH 381 + + K R IPL+ +LL L P+ W+F + + G I R Sbjct: 259 WTVPASRSKSGKVRRIPLSEAAVKLLVGLPPEPDC-----PWLFPNAASDGPIENIRRCW 313 Query: 382 NRALVLAELP-HISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKH 431 NR A LP H LR SF +L V I+GH + ++ Sbjct: 314 NRLKAAATLPSDTRPHDLRHSFASLLVGSGQSLYSVQTILGHASPNMTARY 364 >UniRef50_B3CTI8 Putative integrase n=7 Tax=Orientia tsutsugamushi str. Ikeda RepID=B3CTI8_ORITI Length = 379 Score = 234 bits (597), Expect = 5e-60, Method: Composition-based stats. Identities = 77/425 (18%), Positives = 148/425 (34%), Gaps = 60/425 (14%) Query: 33 FTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTIGNIND 91 FT + + P +K+ D L G K G ++ +GN + Sbjct: 7 FTQIAISKIK-PPKEKRDVYRDTKDKGLFLEVLYGGTKTLYLGITIKGVYRKIKLGNFPN 65 Query: 92 WKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELR 151 ++ AR + L+ I GIDP K T ++ Y+ + Sbjct: 66 ISVNYARKKTLILKGQIAKGIDPL----------------KTKNASTLKEVYDLYINHRK 109 Query: 152 TGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAA 211 S+K L +L + +S + + I Sbjct: 110 LKDSSKIL-------------------------YKGIMNKYLKNLHYIHVSNIRKEDIYK 144 Query: 212 WLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADD 271 + ++ +L++A + + + +I + A + KM D Sbjct: 145 IFNNAKKGGKYSANKTLKLIKAILNIAVELE----LIEKNPANGIKIHKM-----QARDR 195 Query: 272 CLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKI 331 + E++ + +AV NP ++ + L T ARR + S+RW ++ + I + Sbjct: 196 YITLEEMPRFLAAVEEDKNPYLKYFVYISLYTAARRNNVLSMRWENIRLEEGVWYIPETK 255 Query: 332 EGE-RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSK-SGKIIEPRSAHNRALVLAE 389 GE + +PL + E L S ++ WVF + SG + A R A Sbjct: 256 NGESQTVPLINLLIEKLKQY-----SYSSESEWVFPGQRRNSGHLTSINVAWKRVCKRAG 310 Query: 390 LPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIET 449 L ++ +H LRR+ G+ +P ++++++ H K Y +++R +K Sbjct: 311 LKNLRIHDLRRTVGSWMAKFGMPIAVISKLLNHNDHQST-KFYIHLNTNVVRDAIQKFAN 369 Query: 450 WILNE 454 I Sbjct: 370 EIAKC 374 >UniRef50_Q1NPW4 Phage integrase n=5 Tax=Deltaproteobacteria RepID=Q1NPW4_9DELT Length = 465 Score = 233 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 85/432 (19%), Positives = 151/432 (34%), Gaps = 58/432 (13%) Query: 23 SRKMALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYA-GK 80 +R A+ + K + ++ PEGK + +D +T S G K + + GK Sbjct: 82 TRSNAMPKIKLNAKFVKEAVCPEGKAKIDYYDEALTGFILEVRSTGGKTYHLRYRDGHGK 141 Query: 81 TLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFS 140 + IG +D D A+A A RL++ + G DP + K K T Sbjct: 142 LRQHKIGGADDISFDKAQAAATRLRSRVVLGEDPLAERQTK------------KQVPTL- 188 Query: 141 VAWEDYLQELRTGISAKTKRPYSTR--YIADHINLSSRGGESKKRGQGPTSAGPLASLLN 198 E++ E KR + + Y+ +H+ L N Sbjct: 189 ---EEFAAEKYMPYVKGYKRSWKSDFGYLKNHL---------------------LPLFGN 224 Query: 199 LPLSELTPDYIAAWLSTERQNRPTVT--AHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDY 256 L ++ + + + LLR + + IPG + Sbjct: 225 QHLDQIKQAEVIELHHGMKARGYALATCNRQVILLRYIFNLA-----RKWKIPGA-DNNP 278 Query: 257 NVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWS 316 + + + + L +++ +A+ S N + +LLL G R+ E+ + RW Sbjct: 279 TTGVALFEANNGRERYLTEDEAARLKAALESSENTQLKYIVSLLLLLGCRKSELLNSRWE 338 Query: 317 DVDFKWSSMRIK-DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKII 375 D D S RI K R +PL+ E+L + + +V + + Sbjct: 339 DFDLARRSWRIPLSKSGKARYVPLSTAALEVLASIPRL-------SPYVVPNPKTLQPFV 391 Query: 376 EPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRR 435 + + A A LP + +H LR SF + V+Q++GH ++ Y Sbjct: 392 SVFRSWDTARKKAGLPDVRMHDLRHSFASFLVNSGRSIYEVSQLLGHSQLKTTQR-YSHL 450 Query: 436 PLDLLRKWHEKI 447 D L + I Sbjct: 451 SNDTLLAAVDSI 462 >UniRef50_A1WTV4 Phage integrase family protein n=1 Tax=Halorhodospira halophila SL1 RepID=A1WTV4_HALHL Length = 379 Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats. Identities = 79/407 (19%), Positives = 146/407 (35%), Gaps = 52/407 (12%) Query: 51 FLWDADVTTL--ACRATSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLI 108 L D L R T A F +AG T + + + DAR+ AR +++ Sbjct: 20 VLSDRKAPGLIVEVRPTGSATYFYRYRNHAGLTRSCKLARFREISLKDARSLAREKASIV 79 Query: 109 DTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIA 168 +G DP+ K + A S ++Y +E + KR + T I Sbjct: 80 ASGHDPQEEKNTRRA----------------SPTLKEYAEECYLPHAKSYKRSWKTDEIM 123 Query: 169 DHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTE--RQNRPTVTAH 226 + + L +L +S++ + + A ++ R P+ Sbjct: 124 LNHH-------------------ALPTLGTKKMSDINRNQVEAIMNDMKSRGYAPSTVDR 164 Query: 227 AYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVR 286 L+ K + IPG + + + PV +K ++ L +E++ A R Sbjct: 165 VLTLISYMFKVA-----MDNEIPG-VVSNPTEKIKRPVIDNKIENYLTREEVNRMLEAAR 218 Query: 287 SLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSEL 346 N+P + +++ +LTGAR+ EI S R+ D D I G R + L ++ Sbjct: 219 RRNHPHIYSIIRMAVLTGARKAEILSARFEDFDLDNKIWNIPKGKNGSRKVILAEKAVQM 278 Query: 347 LNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAEL-PHISLHGLRRSFGTL 405 + L + +D+ +F + L + + + H LR S+ +L Sbjct: 279 VKELPKQEGTDL-----LFPQPGTDKPYQCIQKPFKAVLRDSGIDESVRFHDLRHSYASL 333 Query: 406 AEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWIL 452 V V +++GH + Y LR ++ I+ Sbjct: 334 LVQGGVNIYEVKELLGHSQITTTMR-YAHLSAQGLRNHSNRLAETII 379 >UniRef50_Q1NSR7 Phage integrase n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NSR7_9DELT Length = 452 Score = 230 bits (586), Expect = 8e-59, Method: Composition-based stats. Identities = 85/450 (18%), Positives = 155/450 (34%), Gaps = 51/450 (11%) Query: 28 LSRQKFTFERLRRFTL-PEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTI 86 + + K T ++ L + T +WD+++ R T + F+ Q G+T+R + Sbjct: 35 IPKIKLTQTTVKALPLYDQSGHXTMVWDSELRGFGVRLTPAGRTFIVQGRINGRTIRRAL 94 Query: 87 GNI--NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWE 144 G + D AR +A + GID ++ +T E Sbjct: 95 GRLEDGDITPQQAREQAIIRLAEMRKGID------------SGAPGKATNGPLTLKEWAE 142 Query: 145 DYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSEL 204 DY R S+ + + I H+N G + N P+ E+ Sbjct: 143 DYKAHKRKKNSSLPLKDSTKADIDKHVN------------------GIFKAWSNKPIGEI 184 Query: 205 TPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPV 264 + + + T A+R+ RA W+ + I Sbjct: 185 DREMVLTLYRNGCKRSSAQTCQAFRVFRALYNWALAKSTGADGIATIPPNPVGALVNEWT 244 Query: 265 SASKADDCLQKEQLKSWFSAVRSLNN-------PIASAYLQVLLLTGARREEIASLRWSD 317 + + + L +++ + + +R + A+ + +LLTG R E +L WS Sbjct: 245 TPAPRTNRLPMDKIGAAWLFLREQSQSAAFAATRTAADMVCFMLLTGCRIGEAKNLPWSQ 304 Query: 318 VDFKWSSMRIKDKIEGERII-PLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIE 376 VD + R+ D II PL+ ++L Q +VF + + G I + Sbjct: 305 VDLDAKTWRLPDPKNRVPIILPLSNLAHQILTHRRQV-------NSFVF-NGRQGGHIKD 356 Query: 377 PRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSA-LAEKHYRRR 435 R IS H LRR+F +A+ ++ ++ H + + HY Sbjct: 357 CRGLLENLAKHIG-HQISPHDLRRTFAAIAKECKIKHTERKLLLNHALAGDVTGIHYDDN 415 Query: 436 PLDLLRKWHEKIETWILNEAGITIKNNVDM 465 + I WI +A + N D+ Sbjct: 416 DHSGMTTEVNLIADWITRQAELAEGNITDI 445 >UniRef50_A5FXQ0 Phage integrase family protein n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FXQ0_ACICJ Length = 412 Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 97/453 (21%), Positives = 170/453 (37%), Gaps = 59/453 (13%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAGKTLRMTIGNI 89 +FT R+ T PEG+K +D ++ R TS G+K ++ Q A R+++G Sbjct: 1 MRFTMNRIAALTCPEGRKDALFFDEELPGFGVRVTSTGSKTYLAQYRGATGVRRVSLGKH 60 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 + DAR AR + + +G DP + K A Q+E+ T AW QE Sbjct: 61 GVISLADARNAARAILGQVASGGDPIAERRAKDEAARQAQSEAAFTVEALIAAWVADRQE 120 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT-PDY 208 R K + LA LL +P S +T Sbjct: 121 SRRASYLKVAAAALRTH--------------------------LAHLLTVPASAMTVRQA 154 Query: 209 IAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 +AA + P RA W+ +++ LA + P Sbjct: 155 VAALDRVKAAAGPVAGNRLLAYARACFGWACKRQR--------LAMNPFAGLERPAREKS 206 Query: 269 ADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVD---FKWSSM 325 D L ++ + + A L+ P A + ++L+LT RR+E+AS+RW+++ WS Sbjct: 207 RDRVLTDAEIGAIWRAAALLDYP-AGQFTRMLMLTLGRRDEVASMRWTEIAADGLTWSLP 265 Query: 326 RIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRAL 385 + K ++ L+ +L+ L + NSD ++F + + + I S A+ Sbjct: 266 ADRAKNGKSHVVHLSEPARGILSALPRFENSD-----FLFTTTGE--RPISGFSGFKLAI 318 Query: 386 VLA-------ELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGH---KPSALAEKHYRRR 435 A + H RR+ T P + +++ H +A + R Sbjct: 319 DRAIEADLGRGIADWRFHDFRRAGVTWLAGAGFPPHVADKLLNHMSGSIQGVAAVYQRAE 378 Query: 436 PLDLLRKWHEKIETWILNEA--GITIKNNVDMR 466 L + + + +++ A G T N + +R Sbjct: 379 FLPERERALDAWASHVISAAAGGTTAGNVIALR 411 >UniRef50_C9CXZ5 Phage integrase n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9CXZ5_9RHOB Length = 391 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 79/433 (18%), Positives = 154/433 (35%), Gaps = 59/433 (13%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAG-----KTLRM 84 K T R+ K T+LWD + + SG K ++++ G +T M Sbjct: 1 MKLTKRRIDTAEYDPAKP-TYLWDDSLAGFGVKVLQSGKKRYIYKYRTHGGGRRAQTRWM 59 Query: 85 TIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWE 144 TIGN + ++ AR A ++ G DP+ K K + + W Sbjct: 60 TIGNYGEIPLETARNIALECAAMVARGQDPQSDKIKK------------REAPSLVDLWG 107 Query: 145 DYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSEL 204 + + + T R Y + +L ++++ Sbjct: 108 RFEESDMKRLKPATIRDYRS----------------------LWKNILEPALGKRRVADI 145 Query: 205 TPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSN-YQKKYQGIIPGDLAQDYNVRKMVP 263 + + + P + +L + + ++ + QG P R + Sbjct: 146 SRADVDRLHRSMSDT-PYQANRSIAVLSKMMTLAEIWEWRDQGTNPC--------RYVTR 196 Query: 264 VSASKADDCLQKEQLKSWFSAVRSLN-----NPIASAYLQVLLLTGARREEIASLRWSDV 318 K + L E+L+ +A+ +L P + ++LLL GARR EI++ W+ + Sbjct: 197 HREGKRERYLSTEELERLGAALTNLVDLGLLWPDMANLFRLLLLVGARRSEISNCEWNWI 256 Query: 319 DFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPR 378 D++ + + D G + + L+ +L + +K +VF + I+ Sbjct: 257 DWERRIIALPDSKTGAKPLFLSNEAITVLQNQKITTRHQSSK--FVFPGAKANKAIVNLS 314 Query: 379 SAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLD 438 AEL ++ +H LR + ++A V I+ +++GH + + Y D Sbjct: 315 KPWKLICEEAELENLRIHDLRHTAASIAVGQGVALPIIGRLLGHTQTQTTAR-YAHVDAD 373 Query: 439 LLRKWHEKIETWI 451 K I I Sbjct: 374 PALKAANAIGQAI 386 >UniRef50_A8LM37 Integrase family protein n=3 Tax=Rhodobacterales RepID=A8LM37_DINSH Length = 388 Score = 228 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 80/433 (18%), Positives = 144/433 (33%), Gaps = 56/433 (12%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYA--GKTLRM 84 + + K + + + G WD + R +SG+K++V Q G++ R Sbjct: 1 MPKVKLSKKLVESAAA--GDGDEVFWDTALPGFGLRVKSSGSKSYVVQYRNRQTGRSRRK 58 Query: 85 TIGNI-NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAW 143 TIG + AR AR G DP ++A++R+ + Sbjct: 59 TIGQHGPLMTLYQAREIARGYLADALRGGDP------------VMEAQARRKAKSMRDLA 106 Query: 144 EDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSE 203 +DY+ + + R + D + L + + E Sbjct: 107 DDYMTNHALP-KKRPRSAAMDRSLLDRV--------------------VLPAFGRQSVDE 145 Query: 204 LTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVP 263 ++ I ++ R P LL + + I L D V+ + Sbjct: 146 VSHKDIQRLHNSLRDT-PYQANRVLALLSKMFELA---------IRWGLRGDNPVKGVPR 195 Query: 264 VSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWS 323 + K L +L A+ + N A+ +++ LLTGAR E+ + +WSD D Sbjct: 196 FAEEKRYRWLSDNELDRLREALDAHPNQRAANAIRLQLLTGARTGEVLTSQWSDFDLDRG 255 Query: 324 SMRIKDKIEGERI---IPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSA 380 ++ +PL+ LL +A D +VF I + + Sbjct: 256 VWVKPSHHTKQKRTEHLPLSAATVALLRSIAHGRTDD---SPFVFPGRKPGHPIKDLKRF 312 Query: 381 HNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLL 440 A L LH R + + IV +++GH ++ Y D L Sbjct: 313 WTSVTSTAGLKDYRLHDNRHTHASHLVSSGHSLPIVGRLLGHTNPMTTQR-YAHLADDPL 371 Query: 441 RKWHEKIETWILN 453 R+ E + + N Sbjct: 372 RQAAEVMGQKLTN 384 >UniRef50_B2HWC8 Integrase n=6 Tax=Acinetobacter RepID=B2HWC8_ACIBC Length = 457 Score = 227 bits (579), Expect = 6e-58, Method: Composition-based stats. Identities = 90/443 (20%), Positives = 162/443 (36%), Gaps = 49/443 (11%) Query: 29 SRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIGN 88 KFT + L E +KQ F D F + + GK+ R IG Sbjct: 3 QHIKFTKSVIDSIPLSE-EKQIFYRDTVTIGFGLCVGKTKSYFAEKKMPNGKSKRKVIGK 61 Query: 89 INDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQ 148 + ++ AR EA+RL L+D G+DP K A A A +K T S A++ Y Sbjct: 62 HGVYTLEQARTEAKRLLILMDEGVDPVKQKRDLRASAIQNDA-LQKLVPTLSEAYQYY-- 118 Query: 149 ELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDY 208 +LR ++ + Y + +L L ++T Sbjct: 119 KLRKKLAETSLIAYDG-----------------------CIENYFSDWKDLKLDQITSAM 155 Query: 209 IAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQG----IIPGDLAQDYNVRKMVPV 264 I + P+ A + L A + + K + + + K Sbjct: 156 IIDRHLKLSKASPSRANLASKFLHALFNHTISRYKDESGNKILNIKNPVVIVKEEKAFNK 215 Query: 265 SASKADDCLQKEQLKSWFSAVRSLNN----------PIASAYLQVLLLTGARREEIASLR 314 + + +Q ++W AV + +L +L LTG RR E S+ Sbjct: 216 IKRRKGHV-RADQREAWALAVATTYWMGEQNNDFRAYTNQDFLFLLALTGFRRSEAESVE 274 Query: 315 WSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKI 374 W +VD ++ +++I + E L + + L + + +VF + I Sbjct: 275 WKNVDLQFGTIKIINTKNHED---LLLPMGDTLWHIMRERKKRAGDNKYVFTDRNGVSHI 331 Query: 375 IEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKH--- 431 + R+A ++ + + + H LRR+FGT+A + + + + +++ H Sbjct: 332 SDRRAARDKVTENSGIE-FTFHDLRRTFGTIANSLAIGSYTIKRLINHTTDDDDNDVTDG 390 Query: 432 YRRRPLDLLRKWHEKIETWILNE 454 Y + D L+K IE I++E Sbjct: 391 YIQVSFDDLKKAMNMIEDVIISE 413 >UniRef50_C6I0A6 Phage integrase family protein n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6I0A6_9BACT Length = 453 Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 98/447 (21%), Positives = 169/447 (37%), Gaps = 61/447 (13%) Query: 30 RQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLR-MTIGN 88 + + T +++ L G KQ + D +V +L R K F G +R +++ + Sbjct: 34 KLRLTDTFIKKLALSSG-KQEYFQDTEVLSLFLRVGKRDKVFCVIKRLKGGNVREISLAS 92 Query: 89 INDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQ 148 + + AR A+ + I G DP + + S K+T A + YL+ Sbjct: 93 ASLLTTEAARLRAKEILLDIALGKDPTQRRQL-----------SEMQKMTLQEALDKYLE 141 Query: 149 ELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDY 208 +S+ ++++ L L ++ +T D Sbjct: 142 ------------------------ISTLKESTRQKTYLYPFQHYLPDWLPDKVTSITGDR 177 Query: 209 IAAWLSTERQN---RPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKM---- 261 + +N R T +R LRA + + K P L + V K+ Sbjct: 178 VVNKYKELTKNNTIRTTTIQGLFRALRAVLNF----IKSDWKGPEPLFTENPVSKLASSN 233 Query: 262 --VPVSASKADDCLQKEQLKSWFSAVRSLNNP-----IASAYLQVLLLTGARREEIASLR 314 + V L + ++ ++ ++ I AY +L TG RR E A+L Sbjct: 234 SRLWVKQEARTRILFEHEVPLLYNYLKERLRDPGSDHIVPAYFIFVLFTGCRRNEAATLT 293 Query: 315 WSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKI 374 DVD + + KD +R IPL+ + ELL L WVF K+G + Sbjct: 294 RHDVDLENGFVTFKDTKTVDRTIPLSEPLIELLLRLKTE-----TGGPWVFPGRGKTGHL 348 Query: 375 IEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRR 434 EP+ + + +H LRR+F T A+ V P V ++GHK ++ KHY Sbjct: 349 TEPKKTLASVIKTHNMKPFCIHDLRRTFITYAKGV-APAMAVDNLVGHKTQTVSAKHYEF 407 Query: 435 RPLDLLRKWHEKIETWILNEAGITIKN 461 + LR+ E I +L + +K+ Sbjct: 408 PTPESLREPMETITAKLLELSMNVVKS 434 >UniRef50_Q2NBN0 Site-specific recombinase, phage integrase family protein n=3 Tax=Erythrobacter RepID=Q2NBN0_ERYLH Length = 398 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 72/417 (17%), Positives = 142/417 (34%), Gaps = 57/417 (13%) Query: 43 LPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEA 101 +P+GK +T W R SG ++ Q+ AG+ +TIG + A+ A Sbjct: 26 VPKGKARTTTWLGVEHGFGIRHYPSGRNVYIVQTRMAGRMRTVTIGPTSVLTRYQAQMVA 85 Query: 102 RRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRP 161 RR+ G DP + + + W+ + + T Sbjct: 86 RRVIAYAQVGRDPATERQRIRSAPSFADF--------VTEYWDRWAPRWKASTLE-THTG 136 Query: 162 YSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQ-NR 220 Y RY+ D + + + + EL ++ +W + Sbjct: 137 YRRRYLDD-------------------------AFVGVYIDELNEGHVTSWFADLNNLTG 171 Query: 221 PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKS 280 P + + +L+ + + L R + P + + L ++L Sbjct: 172 PGASNRTFEILKHMLNKAEDWGYR-------LENTNPCRSVRPNRKRQCERFLTNDELAR 224 Query: 281 W------FSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGE 334 A + A + +LLLTG R+ EI +L W+D+ K + + ++D G Sbjct: 225 LGAELTNLRASEDRTKQCSGAAITLLLLTGCRKSEILTLEWTDI--KGNRLHLRDSKTGP 282 Query: 335 RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHIS 394 R + L E++ L + + F + + R A LP + Sbjct: 283 RTVWLGSAAREVIAALPRFERI-----PYPFWNYRYRKPLRCVNGFWRRLRDEAGLPDVR 337 Query: 395 LHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWI 451 +H LR +F + A + ++ +++GH + Y L + ++I + Sbjct: 338 IHDLRHTFASHAAMNKETLPMIGRLLGHANVQTTAR-YAHFDDGHLLEAAQQIGDLL 393 >UniRef50_Q2VZX9 Integrase n=1 Tax=Magnetospirillum magneticum AMB-1 RepID=Q2VZX9_MAGSA Length = 381 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 72/424 (16%), Positives = 145/424 (34%), Gaps = 50/424 (11%) Query: 30 RQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSV-YAGKTLRMTIGN 88 + K + +L+ T+PEGK ++WD + AK F+ Q AG+ R IG Sbjct: 2 KLKLSAAKLKTLTVPEGKSGEYVWDTSLPGFGVYVGKTAKTFLVQFTTRAGEEKRHKIGR 61 Query: 89 INDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQ 148 + D AR EA R+ + G DP A ++R+ + Sbjct: 62 SDVLSYDAARQEALRVLGEVQKGADPTAAIK-----------QARQEGPLSEELVNWFDS 110 Query: 149 ELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDY 208 + KT R ++ + +L + S +T Sbjct: 111 HTMKDSTRKTWRSVVNNHL-------------------------IPALGSRKPSTITKAD 145 Query: 209 IAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 I A + A +L F + P ++ + + ++ Sbjct: 146 ILAAYRDIQAKSGRQANQAIIILSTFYN----RTTDGKFNPASDFRND--KSIRKHRDAE 199 Query: 269 ADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIK 328 + L ++Q+++ + ++ ++L TGAR EI +LRW V+ ++ + Sbjct: 200 REVVLSQDQVRALLADFDKSPAQQSADAARLLFYTGARIGEILALRWDAVNLTQGTITLA 259 Query: 329 DKIEGE---RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRAL 385 + E + + L+P +L + + +VF + ++ A Sbjct: 260 HTMTKEAKAKTLHLSPRAQAILE---RRQEEALEGAEYVFPGRDGEAHQVVIKAFWKAAC 316 Query: 386 VLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHE 445 + + +H +R ++ T+ V + MGH + + Y R D + Sbjct: 317 KRCGIEGVHIHDIRATYSTILIASGESAKAVGKTMGHADTKTTMR-YERIAQDRAKDIAS 375 Query: 446 KIET 449 K++ Sbjct: 376 KVDD 379 >UniRef50_B8ERI0 Integrase family protein n=1 Tax=Methylocella silvestris BL2 RepID=B8ERI0_METSB Length = 400 Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 91/435 (20%), Positives = 170/435 (39%), Gaps = 49/435 (11%) Query: 32 KFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNIN 90 T + + P+ K+ D L SGAK++ ++ + GK ++TIG+ Sbjct: 4 NLTIKGIAALK-PQAKRCEVP-DGHTRGLYFVVQPSGAKSWAYRFSFEGKPKKLTIGSYP 61 Query: 91 DWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQEL 150 + AR+ A T + G +P K ++ E + + Q + Sbjct: 62 AIDLSRARSIALASATKVANGRNPAAEKK--------VEREKARKPSDLDLVDVVVAQFV 113 Query: 151 RTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIA 210 + KT RP S + + + L+ L+E+T I Sbjct: 114 VKHVEPKT-RPQSAKEMKRILKR-----------------EILSRWSGRRLTEITRSDIR 155 Query: 211 AWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKAD 270 L P + + ++ + I WS + L+ P A + D Sbjct: 156 DLLEAIADRAPIMANRVFEVISSLINWSISMEM--------LSASPIAGLRKPSPAKRRD 207 Query: 271 DCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFK---WSSMRI 327 L +++L + A P S ++VL+L+G RR E++ + WS++DF+ W+ + Sbjct: 208 RILSEKELTDVWQASERAGWPYGS-MIKVLILSGQRRSEVSDMTWSEIDFEERSWTLPAV 266 Query: 328 KDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVL 387 + K IIPL+P + ++L L + ++ G+VF +N S I + +AL++ Sbjct: 267 RTKNGKGHIIPLSPTIIDVLLTLPRI----GSESGFVFTTNGFS--PIRNFARRKKALMM 320 Query: 388 A--ELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHE 445 + + +LH LRR+F T ++V +V +++ H + D + E Sbjct: 321 SCQSENNWTLHDLRRTFATGMARLKVELPVVEKLLNHSSGTFGGVQGVYQQYDFQSEKRE 380 Query: 446 KIETWILNEAGITIK 460 + W IT K Sbjct: 381 AMNLWASYVNKITNK 395 >UniRef50_B5J7N6 Site-specific recombinase, phage integrase family protein n=1 Tax=Octadecabacter antarcticus 307 RepID=B5J7N6_9RHOB Length = 376 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 83/432 (19%), Positives = 153/432 (35%), Gaps = 66/432 (15%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTI 86 + + T L+ LPE + Q WD ++ R + G+K+FV V+ R T+ Sbjct: 1 MPKVILTEITLKSLPLPE-RGQATYWDETISGFGVRVSQGGSKSFVV--VHGVNRQRETL 57 Query: 87 GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDY 146 G + AR +A++L I G+ + +++ A + + Sbjct: 58 GRYPTITLKQARGQAKKLLAQITLGV-------------------QQNRTISYKDARDLF 98 Query: 147 LQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTP 206 L+ T T Y R A L E+T Sbjct: 99 LEACETKNKKNTVDYYRKRLDAH------------------------FRFGRKRLDEITR 134 Query: 207 DYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSA 266 I + + + HA+ ++R + W+ ++ Q P Sbjct: 135 TDIQTRIRKIKTSSSEQ-NHAFVVIRTLMNWAVREQYVD--------QSPIASMKPPTKP 185 Query: 267 SKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMR 326 D L ++L + P + +L+LTG RR E+AS+RW + ++ Sbjct: 186 QARDHVLTDQELIQAYKVSLEHPYPF-GPIISLLVLTGMRRSEVASMRWDWISHGERTIT 244 Query: 327 IKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPR--SAHNRA 384 I + + + PY + VL P + +F S S++G + S Sbjct: 245 IPADVTKNKRVQTLPYADLVEAVLETIPEIGPH----LFPSRSETGTVFNGWGKSKERFD 300 Query: 385 LVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGH---KPSALAEKHYRRRPLDLLR 441 L + +LH LRR+F T + P + +++ H S +A + R +D +R Sbjct: 301 ASLENIEPYTLHDLRRTFATTHAKIGTPIHVTEKLLNHISGTISGVAAVYNRHSYMDEMR 360 Query: 442 KWHEKIETWILN 453 + +T++ N Sbjct: 361 TAVTEYDTYLEN 372 >UniRef50_Q2NBN1 Site-specific recombinase, phage integrase family protein n=3 Tax=cellular organisms RepID=Q2NBN1_ERYLH Length = 390 Score = 221 bits (562), Expect = 6e-56, Method: Composition-based stats. Identities = 88/422 (20%), Positives = 156/422 (36%), Gaps = 55/422 (13%) Query: 39 RRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVF-QSVYAGKTLRMTIGNINDWKIDDA 97 R LP+ +++ +WD ++ R F F + + GK R+T+G ++ + A Sbjct: 19 ARRKLPQREREYCIWDTELAGFGLRVRPSGNYFWFVRLRHRGKHRRITLGRTDELEAGLA 78 Query: 98 RAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAK 157 RA+ARR+ +D +AV A T + E Y +L Sbjct: 79 RAQARRILAETA--LDGLPKRAVVKA------------TPTMTDFVEAYWDDLSRVWKPS 124 Query: 158 TKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTER 217 T KR + + ++++ P I W Sbjct: 125 T----------------------TKRNWDAWRLDIKPTFGDTRVADILPADIHRWRDGCA 162 Query: 218 QNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQ 277 A +L A +K++ K + PG R M + L + Sbjct: 163 GESEVKFNRAVPVLSALLKYAEALKMRR---PGS----NPCRGMPRYKRQSVERYLTPAE 215 Query: 278 LKSWFSAVRSL--NNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGER 335 + +A+R + P A ++LL TGAR EI +LRW V K + + D G + Sbjct: 216 YRRIGAALREAEADRPAEVAIARLLLFTGARVGEIKNLRWEWV--KPPRLLLPDSKTGPK 273 Query: 336 IIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISL 395 +I L ++L V+ + +S++ VF + + + + LP + + Sbjct: 274 VIWLNSQAQDVLAVIERREDSEL-----VFPNKTGK-RPVNFDQWWFVFRRRCALPDVRI 327 Query: 396 HGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWILNEA 455 H LR SF + A VP + +++GHK K Y D++ + E+I + Sbjct: 328 HDLRHSFASTAIMENVPLSTIGKLLGHKLVETTAK-YAHLSDDVIGEAAERISGSLAQAI 386 Query: 456 GI 457 G+ Sbjct: 387 GL 388 >UniRef50_A7ICY0 Integrase family protein n=14 Tax=Alphaproteobacteria RepID=A7ICY0_XANP2 Length = 452 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 95/458 (20%), Positives = 157/458 (34%), Gaps = 69/458 (15%) Query: 32 KFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNIN 90 K T + G K +WD ++ R TSG +++V Q AG++ R TIG Sbjct: 3 KLTKRAVDAAEA--GAKDYVIWDDELPGFGLRVFTSGKRSYVLQYRSAGRSRRFTIGLHG 60 Query: 91 DWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQEL 150 W + AR EA+ I G DP + + + +T + YL +L Sbjct: 61 VWTPERARQEAKAQLGRIAQGDDPAEERLLD------------RKALTVKELCDLYLADL 108 Query: 151 RTGI-SAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 + G+ K RP IA + R + L + + +LT I Sbjct: 109 QAGLILGKGGRPKKPGTIASDLGRIHRH--------------IVPLLGSRRVRDLTKADI 154 Query: 210 AAWLSTER-------------------QNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPG 250 + + LL + ++ GII Sbjct: 155 TRAMKDIMAGKTRISVMTKNLRGRSIVRGGAGTATRTIGLLGGILTYAVEA----GIIET 210 Query: 251 DLAQDYNVRKMVPVSASKADDCLQKEQLKSWFS----AVRSLNNPIASAYLQVLLLTGAR 306 + A P +A L + + + A ++ N ++ ++ + LTG R Sbjct: 211 NPAHGV----RRPKDNVRARR-LSEAEYRVLGDLLKTASKNENYRMSVEIIRQIALTGCR 265 Query: 307 REEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFR 366 R E+ +LRW + D S +R+KD EG I P+ V E L D +VF Sbjct: 266 RMEMVTLRWDEADTDCSCLRLKDSKEGSSIRPIGLPVVEYLERRRNEAIGD-----YVFP 320 Query: 367 SNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSA 426 + + + L IS H LR SF ++A + +A ++GH + Sbjct: 321 GRGGENAFGSFPNHWGKIFANSPLADISPHVLRHSFASVANDLGFTEVTIAALVGHAKGS 380 Query: 427 LAEKHYRRRPLDLLRKWHEKIETWILNEA-GITIKNNV 463 + + L + I +I GI K Sbjct: 381 VTSNYIHTLDT-ALIMAADTISGYIQGLLDGIEFKQTA 417 >UniRef50_B9Z851 Integrase family protein n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z851_9NEIS Length = 407 Score = 218 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 84/434 (19%), Positives = 167/434 (38%), Gaps = 39/434 (8%) Query: 29 SRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAF-VFQSVYAGKTLRMTI 86 +R FT L +P ++ D L R T + K F VF+ V G R++I Sbjct: 3 TRIVFTKAALTNLPVPAAGQRFTFHDTKQPGLQLRVTPNNVKTFAVFKRVAGGSPERVSI 62 Query: 87 GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDY 146 G + ++ ARA+AR + + TG+ ++ + T A +Y Sbjct: 63 GRFPEVTVEQARAKAREVVNALATGV--------SLSAGKRQAKAKAAAVPTLGDAVREY 114 Query: 147 LQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTP 206 ++ R +P D++ + G KR G L L + + ++T Sbjct: 115 VERARRADG----KPLKPSTRHDYLKMVEPG--VTKRTGRKCKDGMLLKLAEIRIDQITA 168 Query: 207 DYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMV--PV 264 D I + +A ++LRA + + Y +PG R+ Sbjct: 169 DDIHRVYDAAAAHGERQQTYAMQVLRAVLNF------YGVAVPGSPFSKDTPRRNRISLP 222 Query: 265 SASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSS 324 A AD ++ E + W+ A+ + + YL+ L LTG R E ++ +D Sbjct: 223 PAQPADKSIEPEDIGRWWLALSEMEDTPTVRYLKFLALTGCRPSEPLEIKVEKIDAAHRC 282 Query: 325 MRIKDKIEG-ERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNR 383 + + D + ++ L+ + + ++ + + +F++ + E R Sbjct: 283 VVLLDTKTRTDHVLYLSNQA----WGIVERQMANKSADERLFKAAYDFYAVAEIR----- 333 Query: 384 ALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSA-LAEKHYRRRPLDLLRK 442 + + S LR +F ++AE + V T + ++M H+ + + +HY R+ LR Sbjct: 334 --EKCGV-YFSRKMLRSTFASIAEPL-VSTYTLKKMMNHRQAGDITARHYIRKSEQQLRA 389 Query: 443 WHEKIETWILNEAG 456 + + ++ +A Sbjct: 390 GWQAVADYLDQQAA 403 >UniRef50_Q5LLE0 Site-specific recombinase, phage integrase family n=2 Tax=Rhodobacteraceae RepID=Q5LLE0_SILPO Length = 400 Score = 218 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 81/434 (18%), Positives = 156/434 (35%), Gaps = 64/434 (14%) Query: 30 RQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGN 88 ++K T + + P K+ D + L R TSG K F +GK R+TIG Sbjct: 2 KRKLTTKFIESQK-PNPSKRLDFRDELMPGLVLRISTSGTKTFCLHKRISGKMRRLTIGR 60 Query: 89 INDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQ 148 + +AR R++ I+TG E +TK T DY++ Sbjct: 61 FGVVSLAEARERVRKVLYEIETGR------------FEDRTGVEVETKPTLGDVIPDYIE 108 Query: 149 ELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDY 208 + H + +R + K+ A+L + E+ Sbjct: 109 K--------------------HAKVHNRDWKRKE-----ALLAKFAALHVKRIDEIKRAD 143 Query: 209 IAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 + ++ P A L+ + W + + M P+S + Sbjct: 144 VVKACDLIHKSAPVSANRALAHLKHLMGWCVERGMIDAS---------PIAGMKPLSKER 194 Query: 269 -ADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI 327 + L ++L + ++A + P +++L+L+G RR E+A +RW+++D + + Sbjct: 195 SRERVLTDDELGALWTACDAEGYPF-GDCMKLLILSGQRRAEVAEMRWTELDLEKRLWTL 253 Query: 328 KD---KIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRA 384 K + +P+T + ++L + + SD +VF + KS + +R Sbjct: 254 PSQRAKNGRQHTVPITDAMIDVLRRVPRFLGSD-----YVFTTTGKS-PVSGFGRLKDRL 307 Query: 385 LVLA--ELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKP---SALAEKHYRRRPLDL 439 +H LRR+ T + VP + ++ HK S +A + D Sbjct: 308 DKALPEGTEPWIIHDLRRTMSTNMAMLGVPQPVTEALLNHKTGVVSGVAAIYNVYSYTDE 367 Query: 440 LRKWHEKIETWILN 453 + E+ + Sbjct: 368 KCEALEQWNRHLTK 381 >UniRef50_B1JLZ5 Integrase family protein n=3 Tax=Gammaproteobacteria RepID=B1JLZ5_YERPY Length = 476 Score = 217 bits (552), Expect = 9e-55, Method: Composition-based stats. Identities = 103/480 (21%), Positives = 171/480 (35%), Gaps = 85/480 (17%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTI 86 ++ KFT + + D V L R SG K+F GK +R T+ Sbjct: 1 MNHFKFTKASIAALPPDPAGGRLEYRDTTVNGLILRIGASGVKSFCISRKRNGKFIRETL 60 Query: 87 GNINDWKIDDARAEARRLQTLID-TGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWED 145 G D I++ARA+A L + G +P + V +KVT A + Sbjct: 61 GRFPDLSIENARAKALELLGEVATNGKNPNDVRRVHAM-----------SKVTLEDAIQT 109 Query: 146 YLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 Y+ + T + Y + +N P++ ++ Sbjct: 110 YIDNRGHRLKPVTAKQYRS-----------------------ILGNFSGDWMNQPMANIS 146 Query: 206 PDYIAAWLSTERQ------------------NRPTVTAHAYRLLRAFIKWSNYQKKYQ-- 245 + + A Q R LRA ++S+ + + Sbjct: 147 RERVEARHKAVTQGSVWFGKDKSLLRAGVGSGSRAQADLWARALRAVYRFSHDHYRDEEG 206 Query: 246 -GIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIA----------S 294 ++P + ++ + K + + L W SAV + N A Sbjct: 207 KTLLPDPPTMVLSTKRQWHGTVRKTERIRTYD-LGRWLSAVDQVRNISADERDDVALSVC 265 Query: 295 AYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPL-TPYVSELLNVLAQS 353 +++ L TG RR E+ +L W V+ I G+ PL P LLN+ + Sbjct: 266 DAIEMALFTGLRRSEVFNLTWDRVNIGGRFFWIDTTKNGD---PLELPITDTLLNLFRRR 322 Query: 354 PNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLA-------ELPHISL--HGLRRSFGT 404 + ++ +VF + G I EPR R + L I H RR+FGT Sbjct: 323 LKLKLGEQHYVFPG--QKGIITEPRRIIARITEVTIPSPNPDGLLPIPFKWHDARRTFGT 380 Query: 405 LAEWVEVPTGIVAQIMGHKP--SALAEKHYRRRPLDLLRKWHEKIETWILNEAGITIKNN 462 +AE V V + I+ ++M H+ SA + Y D L++ K+E IL AG+ K + Sbjct: 381 VAELVGVGSYILKRLMNHRTLRSADVTQGYLHFGADELQEPARKVERAILEHAGLVEKAD 440 >UniRef50_B7RVJ7 Site-specific recombinase, phage integrase family n=4 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=B7RVJ7_9GAMM Length = 392 Score = 217 bits (552), Expect = 9e-55, Method: Composition-based stats. Identities = 81/436 (18%), Positives = 159/436 (36%), Gaps = 63/436 (14%) Query: 30 RQKFTFERLRRFT-LPEGKKQTFLWDADVTTLACR---ATSGAKAFVFQSV-YAGKTLRM 84 + K T + ++ +P K + D + L ++ + GKT + Sbjct: 2 KVKLTNQYIKNPPPVPAHKTKEEHCDTALPGLLWEQRAVNHEWGSYRLRYKSEGGKTAYV 61 Query: 85 TIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWE 144 TIG D + AR AR L+ I+ G DP+ +A+++K +T++ + Sbjct: 62 TIGRSCDISLAGARKRARHLKAQIELGADPQA------------EAKAKKQVLTWNAFFT 109 Query: 145 D-YLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSE 203 D YL ++ + KR + ++ +S+ + N L++ Sbjct: 110 DHYLPHVK-----QHKRSWKNDLEMHNLRISAF-------------------IGNKRLNK 145 Query: 204 LTPDYIAAWLST--ERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKM 261 +T + + ++ E P H +L+R + + + + + + Sbjct: 146 ITRSEVQRFHASLVEEDLSPATADHHLKLIRQALNLAVDWELLEA--------NPVAKVK 197 Query: 262 VPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFK 321 + ++ + L E+++ +++ +N + + LL TGAR E S WSD+D K Sbjct: 198 LFNQDNQVERYLSDEEMQRLLKVLKTDSNRVVCNVILFLLSTGARVSEALSAEWSDIDRK 257 Query: 322 WSSMRIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPR 378 I+ K + +R +PL +L+ L D +F K G + Sbjct: 258 NRVWVIQATNSKSKKKRSVPLNDVAIGVLDALDTEGKHDR-----LFVG--KRGPLTTIN 310 Query: 379 SAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLD 438 R A L +H LR S+ +L V Q +GH + + Y + Sbjct: 311 KVWFRIRSEAGLEDYRIHDLRHSYASLLVNAGHSLFEVQQALGHSDPKVTMR-YAHLSKE 369 Query: 439 LLRKWHEKIETWILNE 454 L++ I Sbjct: 370 SLQRAANSASDKITEA 385 >UniRef50_B6R5P1 Phage integrase n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R5P1_9RHOB Length = 365 Score = 217 bits (552), Expect = 9e-55, Method: Composition-based stats. Identities = 80/375 (21%), Positives = 139/375 (37%), Gaps = 37/375 (9%) Query: 84 MTIGNIND-WKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVA 142 ++IG W ++ARAEA+R+ + G DP A+ ++R+ +T + Sbjct: 17 LSIGRHGSPWTTEEARAEAKRVLGDVAHGGDPMAAR------------QARRKDLTVAEL 64 Query: 143 WEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLS 202 + YL+E A T R + S + + + NLP Sbjct: 65 CDLYLEEGTATKKASTIATDKGRIERHIKPVIGDLLVSDIKANHVRTLLKKVAEGNLPRE 124 Query: 203 ELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMV 262 + P ++ + LL ++N D V + Sbjct: 125 GVGP-------VADKLGGKGTASRTVGLLGGIFSFANELGY---------RTDNPVHGVK 168 Query: 263 PVSASKADDCLQKEQLKSWFSAVRSLN----NPIASAYLQVLLLTGARREEIASLRWSDV 318 K L + +L F + + NP A +++L LTGARR EI L+WS+V Sbjct: 169 RFPDQKNQRYLTQSELTRLFELLEEIEADGANPKAVKIIKLLALTGARRGEIEQLKWSEV 228 Query: 319 DFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPR 378 + ++ +D G++ IP++ V LL Q D +VF S G + Sbjct: 229 FLEQGTLHFEDSKTGQKSIPISAAVIGLLREAEQERCID---SPYVFPSERGDGFYVGAT 285 Query: 379 SAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLD 438 + +H LR SF +LA ++ ++GHK +A ++ Y D Sbjct: 286 KVWRDLRTKFGDEKLRMHDLRHSFASLAVAGGASLPMIGALLGHKDTATTQR-YAHLSAD 344 Query: 439 LLRKWHEKIETWILN 453 LR +++ +L Sbjct: 345 PLRSISDQVGAKLLG 359 >UniRef50_B5KC37 Putative phage-related integrase n=1 Tax=Octadecabacter antarcticus 238 RepID=B5KC37_9RHOB Length = 385 Score = 216 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 76/435 (17%), Positives = 152/435 (34%), Gaps = 67/435 (15%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRM 84 L++Q T +R+ K+ L+DA V L R TSG K++ + G+ LR Sbjct: 2 PKLAQQPLTELAIRKAK--PADKRYDLFDASVRGLGLRVATSGTKSWFMMRRFNGRMLRT 59 Query: 85 TIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWE 144 T G D + +AR +A + + G+ + ++ F V + Sbjct: 60 TFGRYPDLTLANARLKAPNVLADMSDGL-----------------TQGQRKTDLFKVVLD 102 Query: 145 DYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSEL 204 ++L++ + +S + + L + +P++ + Sbjct: 103 EWLKKDQAK------------------------NKSVHQVRVAMYKHALPAFGPMPVASI 138 Query: 205 TPDYIAAWLSTERQ-NRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVP 263 T + + P + F W + + P Sbjct: 139 TKRDVNRLIDKIVDAGSPVAANRVLAFTKRFFSWCKERDILE--------LSPAEAIRPP 190 Query: 264 VSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWS 323 D L E++K +++A + P Q+LLLTGAR E++ W +V Sbjct: 191 SKEKTRDRVLTLEEIKGFWAACDQMGYPW-GPIFQLLLLTGARLREVSQASWGEVSIADG 249 Query: 324 SMRI---KDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSA 380 ++ + + K I L+ ++ L + D+ +F +N + + Sbjct: 250 TLNLPARRTKNGRAHQIQLSDQAINIIQALPKVEGQDL-----IFTTNG-TTAVSGFSKV 303 Query: 381 HNRALVLAELPHISLHGLRRSFGTLA-EWVEVPTGIVAQIMGHKPSAL--AEKHYRRR-P 436 R +++ + H LRRSF T + E + + + +I+ H + Y+ Sbjct: 304 KKRLDIISGVADWRFHDLRRSFATHSTERLGISPVVADKILNHVTGQVRGVAAIYQHGEY 363 Query: 437 LDLLRKWHEKIETWI 451 L+ R +K +I Sbjct: 364 LEERRASLQKWGNFI 378 >UniRef50_A4SIA1 Phage integrase family protein n=2 Tax=Gammaproteobacteria RepID=A4SIA1_AERS4 Length = 408 Score = 215 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 85/437 (19%), Positives = 154/437 (35%), Gaps = 59/437 (13%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTF---LWDADVTTLACRATSG--AKAFVFQSVYAGKTL 82 SR +FT + + ++ D ++ L C G K F+ + ++ G+ Sbjct: 5 PSRFRFTQKAIEALPPNPANAKSTEAEYSDTQISGLKCLVGKGEGNKKFLMRYLWHGRKR 64 Query: 83 RMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVA 142 + IG D ++ AR A + L+ GIDP+ K E ++ ++T Sbjct: 65 AIAIGRFPDVDLNTAREIATEYKRLLSQGIDPKQLK------------EDKRQELTLYEL 112 Query: 143 WE-DYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPL 201 ++ YL A H S + E + R + + L Sbjct: 113 FQLHYLP------------------YAKHHKRSWQNDEQRFRDHLQ------PPMGSRLL 148 Query: 202 SELTPDYIAAW-LSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRK 260 SE+ + A S Q +P LL+A + WS G L Q V Sbjct: 149 SEINLEQGQALQTSLMSQCKPATNNRITTLLKAILTWSVRM--------GYLEQHPLVYL 200 Query: 261 MVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDF 320 ++ L K +++ F A + N A Y+++LLLTG R++E+ +W +D Sbjct: 201 KTLPENNQRTRFLDKAEIRRLFMAADADENRYAGQYVKLLLLTGLRKDELRLAKWEHIDK 260 Query: 321 KWSSMRIKDKIEGE-RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRS 379 ++ I G+ RI+ + ++L + ++F + Sbjct: 261 VHQTLFIPHTKNGKSRILHMNHMAMQVLQD-----TPVIAGNAYLFPGQKPGQPLNNVTK 315 Query: 380 AHNRALVLAELPH-ISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLD 438 NR L A++ + +H R S L V +GH S +++ Y Sbjct: 316 PFNRMLKRAQIEGQVCIHTCRHSVAALIVSSGGTLYDVQAQLGHSSSQSSQR-YAHLHAS 374 Query: 439 LLRKWHEKIETWILNEA 455 LR ++ + Sbjct: 375 RLRHTSAQVANCVEQAL 391 >UniRef50_A4Y8Q0 Phage integrase family protein n=2 Tax=Shewanella RepID=A4Y8Q0_SHEPC Length = 443 Score = 213 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 81/436 (18%), Positives = 163/436 (37%), Gaps = 66/436 (15%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWD----ADVTTLACRA-TSGAKAFVFQSVYAGKTLRMT 85 FT + + G+K+ + D + L SG K F F+ + GK + +T Sbjct: 5 TSFTKRAFEQLEI--GQKRFRIADFGHRDSINGLILDVFPSGKKVFRFRRKHLGKDVTVT 62 Query: 86 IGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWED 145 IG I++AR +A+ + + G++P AK + EAE +A S + F + Sbjct: 63 IGEFPHLTIENARKQAKHIAVDLAEGVNPNEAKRLAKQEAERKEALSISVQQLFDSFEAE 122 Query: 146 YLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 ++ +++TG +HI + +LP+ +T Sbjct: 123 FMVKIKTGERRLNSLKDIQSTWKNHIQ---------------------PRIAHLPVESIT 161 Query: 206 PDYIAAWLS-TERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPV 264 L +N V LL++ Q ++ + Sbjct: 162 TVEAENLLKLIITKNSAAVRNKCLTLLKSMFN---------------EQQINPFGRIKKL 206 Query: 265 SASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSS 324 +A K + L + ++++ ++ P+ + +LLLTG R+ + S+ W ++D + Sbjct: 207 AAVKRERILNQHEVRALLESL-EFEPPLYRDVVMLLLLTGQRKSCVFSMEWREIDHQRGM 265 Query: 325 MRIKDKI---EGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRS-NSKSGKIIEPR-- 378 I + +PLT E++ +L + + + +VF + S SG I E Sbjct: 266 WIIPTSKIKSKKPHAVPLT---KEVMAILERRSHEAAHGVKYVFPAERSHSGHITENAGK 322 Query: 379 -SAHNRALVLAEL-----------PHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSA 426 S R A L ++++H LRR+ + + ++++GH + Sbjct: 323 GSFWYRITERAGLRSPEKSATAKEDNVTIHDLRRTIASWSVMRGGNIQTTSKLLGHSDIS 382 Query: 427 LAEKHYRRRPLDLLRK 442 + Y ++ +R Sbjct: 383 ITASTYAHLDVENVRA 398 >UniRef50_B9KV34 Phage integrase n=4 Tax=Rhodobacter RepID=B9KV34_RHOSK Length = 434 Score = 212 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 75/424 (17%), Positives = 151/424 (35%), Gaps = 25/424 (5%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTI 86 +R++ T E++ R +P + ++DAD+ A G +AF F G+ RMT Sbjct: 11 PNRERLT-EKILRDAVPVPGRDYQIFDADIRGFAVCIYRGGGRAFTFDYRVDGRQRRMTF 69 Query: 87 GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDY 146 +W + AR AR L+ ++D G DP ++ R+ F + Y Sbjct: 70 ARWPEWSVTAARERARELRRMVDAGGDPLGERSR------------RREAPRFQDLIDRY 117 Query: 147 LQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTP 206 L+E ++ + + R ++ + S+ P Sbjct: 118 LKEHVPRLAPVSAADQKSMLAKLVAPYWGRKLVTEITKPDVEKLLAQIAEGRARPSKAKP 177 Query: 207 DYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSA 266 + A L + P +LR + G + A + R P Sbjct: 178 NNRARKLQGPKPT-PVRANRVGEVLRKMFNLAIEW----GWRTDNPANGFFRRIENP--- 229 Query: 267 SKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMR 326 + L K+++ A+ + + A+ +++ +LTGAR E+ R+ D + Sbjct: 230 --RERFLSKDEIDRLAKALDAAEDQRAAGIIRICMLTGARVGEVRQSRFEQFDLEHCLWS 287 Query: 327 IKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALV 386 +R + P ++ ++ Q W+F + + E R R Sbjct: 288 KPAATTKQRRVHRVPISEDVSAIVRQRRLLVPKGSPWLFPGDVPGQPVKEIRRFWIRIQK 347 Query: 387 LAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEK 446 A++ + +H LR +F +L ++ +++GH ++ Y LR + Sbjct: 348 EAQIEGVRIHDLRHTFASLLVSGGASLEMIGKLLGHTQMQTTQR-YAHLMEGPLRAGVDA 406 Query: 447 IETW 450 + + Sbjct: 407 VASV 410 >UniRef50_C7JF17 Phage DNA recombinase n=8 Tax=Acetobacter pasteurianus RepID=C7JF17_ACEP3 Length = 443 Score = 211 bits (536), Expect = 6e-53, Method: Composition-based stats. Identities = 91/467 (19%), Positives = 165/467 (35%), Gaps = 68/467 (14%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAGKTLRMTIGNI 89 K T + T P K+ D +V A R TS G+K F+F G++ R+ +G Sbjct: 1 MKLTKSGIDLLTCPPEKRDVMFSDDEVKGFAVRVTSKGSKVFLFNYSKNGRSKRVKLGAY 60 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAE----SLQAESRKTKVTFSVAWED 145 D + AR A L+ + G DP K + E + ++ +T V + Sbjct: 61 GDLTVAQARKLAETLRGRVIAGEDPAEDKKAQAQAVEAMLAAQAEQAAADALTLGVLIDR 120 Query: 146 YLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 + + SA ++ R L++LL P L Sbjct: 121 WQENSLKDASASYRKEAPQRL-----------------------RSSLSALLARPAHALK 157 Query: 206 PDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVS 265 + A L Q+ PT RA W+ + +G + R +V Sbjct: 158 VAEVQARLDEVAQDHPTNARRIKAYGRAMYGWAEKRNLVEG--------NPFARVIVEGR 209 Query: 266 ASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSM 325 D L +L ++ A + P + Q+L LT RR E+A +RW ++ WS Sbjct: 210 EVSRDRVLSDRELGEYWRAAALIPYPF-GPFFQLLALTLQRRTEVAGMRWDEIAPDWSEW 268 Query: 326 RI---KDKIEGERIIPLTPYVSELLNVLAQSPNSDVNK-EGWVFRSNSKS--------GK 373 I + K ++ L+ +L + + ++ +V K+ K Sbjct: 269 TIPAERTKNGKAHVVHLSDATRRVLAGIHRQVDAKTGHISPFVLSGTGKTPVSGFSVATK 328 Query: 374 IIEPRSAHNRALVLAE-----------LP--HISLHGLRRSFGTLAEWVEVPTGIVAQIM 420 ++ RA AE LP LH LRR+ T+ +++ + +++ Sbjct: 329 RLKALIMLERAENEAEGQKNAGKNPSALPALGWHLHDLRRTGVTVMARLKIGPHVADRVL 388 Query: 421 GH---KPSALAEKHYRRRPLDLLRKWHEKIETWILNEAGITIKNNVD 464 H S + + R + L + ++ W+ + + + V+ Sbjct: 389 NHIEGTISGVTAVYQRH---EFLTERAVALDIWVAHVLRVAESSEVE 432 >UniRef50_Q1K3L6 Phage integrase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3L6_DESAC Length = 397 Score = 210 bits (535), Expect = 7e-53, Method: Composition-based stats. Identities = 86/443 (19%), Positives = 168/443 (37%), Gaps = 65/443 (14%) Query: 28 LSRQK---FTFERLRRFTLPEGKKQTF-----LWDADVTTLACRATSGAKAFVFQSVYAG 79 ++R K T + P +T + LA +G++++ F+ + G Sbjct: 1 MTRTKTKRMTVRVIESLPGPPSNSKTSNIEYSVAQETNLCLAVY-KNGSRSWRFKQKFRG 59 Query: 80 KTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTF 139 K L +TIG + + +A + R + LI GIDPR + + + E Sbjct: 60 KRLFITIGPYPLFSLQEAIDKTRHFKRLIADGIDPRQEQQPQSQLTLAQFVE-------- 111 Query: 140 SVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNL 199 +D+L PY+ ++ + ++ KR + + Sbjct: 112 ----QDFL-------------PYARKH---YKTFHNQQNMLDKR--------IIKTFGAT 143 Query: 200 PLSELTPDYIAAWLSTER-QNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNV 258 PL++++ + + + T LL + K + + DL + Sbjct: 144 PLADISKREVMLFHQQVCDETSGTTGNRHLSLLSSIFKLA---------LEYDLLEKNPC 194 Query: 259 RKMVPVSASK-ADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSD 317 R + ++ D LQ+++ + +++ + ++ + +L+ G R+ E+ SLRW D Sbjct: 195 RGIKKAKENRSRDRFLQEDEYTRFIQVLQTKLDQPSACAIFLLIALGMRKSELLSLRWED 254 Query: 318 VDFKWSSMRIKDKIEGE-RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRS--NSKSGKI 374 V + ++D GE R + L LL + Q + WVF S +S+SG + Sbjct: 255 VSLADRHLHLRDTKNGESRYVALNSVSHGLLTKMKQKRKAS---NPWVFPSRTSSESGHL 311 Query: 375 IEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRR 434 + R +++ + +H LRRS + V IV +I+GHK + + + Sbjct: 312 QDVRRTFATVCRESKITGLRIHDLRRSHASHLLNAGVDISIVGKILGHKSLKSTQIYAKV 371 Query: 435 RPLDLLRK---WHEKIETWILNE 454 L R KIE + Sbjct: 372 ATSSLARTSEIASRKIEEVMNQA 394 >UniRef50_A8TPU7 Phage integrase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TPU7_9PROT Length = 410 Score = 210 bits (534), Expect = 9e-53, Method: Composition-based stats. Identities = 88/424 (20%), Positives = 154/424 (36%), Gaps = 45/424 (10%) Query: 45 EGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARR 103 +G+ FLW + R SG K +V Q + R+ IG +D AR A+ Sbjct: 8 DGEGDIFLWCTALPGFGLRVYPSGRKVYVCQVRVGRRQRRLKIGLAETLTLDQARERAKL 67 Query: 104 LQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTG-ISAKTKRPY 162 G DP++ + + R+ +T + Y++ G + + RP Sbjct: 68 AIDAASEGRDPQLER------------QERRAALTVAELCTVYMETAEAGQVRTRFGRPK 115 Query: 163 STRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQN--- 219 + +A R G P A A++ L ++ A + T+ + Sbjct: 116 AASTLAIDRGRIDRHL-VPLIGNVPAHALTRAAVQRL-ADDIASGKTAGRVKTKSRGVAH 173 Query: 220 ---RPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKE 276 A LL W+ + + P A D L + Sbjct: 174 VTGGAGTAARVIDLLGGIYSWAAKRDLVPTVNPAHGVDT--------AKAGTKDRVLTVD 225 Query: 277 QLKSWFSAVR--SLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGE 334 ++++ A+ P+A+ L+++ LTG RREE LRW++VD +S+R+ G Sbjct: 226 EMQALGKAIEAAQEKQPMAAGALRLIALTGLRREEACGLRWAEVDLDAASLRLSSTKTGR 285 Query: 335 RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSN-------SKSGKIIEPRSAHNRALVL 387 + PL +LL L Q +VF S+ +S + + + Sbjct: 286 SLRPLGSPAVDLLRHLPQL------DAAFVFPSSRSRDPRTGQSARAADLKKQLAAIFDA 339 Query: 388 AELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKI 447 A L H RR+F ++A G + +++GH + HY RR L +++ Sbjct: 340 AGLADARSHDCRRTFASVAADEGFGDGTIGELLGHARRGVTAVHYVRRLDSALIAAADRV 399 Query: 448 ETWI 451 I Sbjct: 400 SRRI 403 >UniRef50_B5K290 Phage integrase n=2 Tax=Octadecabacter antarcticus 238 RepID=B5K290_9RHOB Length = 426 Score = 210 bits (534), Expect = 9e-53, Method: Composition-based stats. Identities = 71/415 (17%), Positives = 143/415 (34%), Gaps = 24/415 (5%) Query: 35 FERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNINDWK 93 E+ R +PE + ++D ++ L+ R SG+++FV +AG+ RM IG +W Sbjct: 17 NEKTVRDMIPEEDRDYQVFDTEIRGLSIRTLRSGSRSFVLDYRFAGRQRRMAIGRWPEWS 76 Query: 94 IDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTG 153 AR AR L+ ID G DP ++ + F + YL E Sbjct: 77 ATAARERARELRREIDEGRDPLGDRS------------ELREAPRFKDMIDRYLAEHVPH 124 Query: 154 ISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWL 213 ++ + + + + + S+ P+ A L Sbjct: 125 LAPLNAGDQRAMLTKLVAPHWANKLVADITPHDVATLLNIIAQGRARPSKEKPNNRARKL 184 Query: 214 STERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCL 273 + P +LR + D + + L Sbjct: 185 QGAKPT-PIRANRVGEVLRKMFTLAISWGW---------RTDNPATGFKKRVETARERFL 234 Query: 274 QKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEG 333 +E++ + + + + A+ +++ +LTG+R E+ R+ + + Sbjct: 235 SQEEIGRLAAVLDAAEDQRAAGIIRICMLTGSRVGEVRQARFEQFNLELCIWSKPAATTK 294 Query: 334 ERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHI 393 +R I P +++ ++ Q S W+F + + E R A LP + Sbjct: 295 QRKIHRIPISADVAAIVRQRSVSVPRDNPWLFPGDVPGQPVKEIRRFWINVQREANLPDV 354 Query: 394 SLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIE 448 +H LR +F +L ++ +++GH ++ Y LR + + Sbjct: 355 RIHDLRHTFASLLVSGGASLEMIGRLLGHTQMQTTQR-YAHLMDSPLRAGVDAVA 408 >UniRef50_A6F6W3 Putative uncharacterized protein n=1 Tax=Moritella sp. PE36 RepID=A6F6W3_9GAMM Length = 401 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 77/445 (17%), Positives = 157/445 (35%), Gaps = 67/445 (15%) Query: 26 MALSRQKFTFERLRRFT---LPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAGKT 81 + + KFT L+ + + + D ++ L C + G K F+ + + G+ Sbjct: 8 ITTKKFKFTNTNLKSLPSNQVNSSSTELEVSDTEIIGLKCLSGKTGNKRFLLRYKFNGRK 67 Query: 82 LRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSV 141 +TIG D I+ AR AR+ + +I G+DP+ + ++ T Sbjct: 68 CSITIGRFPDIDINQARKVARKYKGMIADGVDPKAERDNQVD------------YPTVKS 115 Query: 142 AWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPL 201 + D ++ + K+ + + S S+ N+ Sbjct: 116 FFYD----TYLPLAKRRKKTWGIDEKRFRKHCS--------------------SISNIKY 151 Query: 202 SELTPDYIAAWLSTERQNR-------PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQ 254 +ELT ++ T + + P LL+ K ++ + Sbjct: 152 NELTVSHVMKLHLTLSETKYKGEYYAPATCNRVLALLKTMGKLAHSMLDVDNVAD----- 206 Query: 255 DYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLR 314 R + + ++ K R+ P ++ +L L G R E+ Sbjct: 207 ----RVSLLPENNARTRYCDIDETKRIIKVARAYPKPSIGNFIALLHLIGCREGELRFRV 262 Query: 315 WSDVDFKWSSMRIKDKIEGE-RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGK 373 SD++F+ ++ I G II L+ + E+L + + ++ +VF + K GK Sbjct: 263 HSDINFEKRTLTIPRTKNGTYHIIYLSDLMIEILQSIPK-----ISGNNFVFPAPHKKGK 317 Query: 374 IIE-PRSAHNRALVLAELPH---ISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAE 429 I PR + + +A + + + LH R S + V V +++ HK + Sbjct: 318 PIGAPRYSFDIIKQMAGIENPDEVLLHTARHSVASNLISNGVDISSVQKLLNHKDISSTL 377 Query: 430 KHYRRRPLDLLRKWHEKIETWILNE 454 + Y + R+ I + + Sbjct: 378 R-YAKLSEGKQRETASMISSMVEEL 401 >UniRef50_B4WEQ1 Site-specific recombinase, phage integrase family protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WEQ1_9CAUL Length = 429 Score = 208 bits (528), Expect = 5e-52, Method: Composition-based stats. Identities = 95/452 (21%), Positives = 162/452 (35%), Gaps = 63/452 (13%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSG------------AKAFVFQS 75 +++QK T + +PE + +WD+++ R G K F + Sbjct: 1 MTKQKLTKRVVESAPVPETGEG-RIWDSEIAGFCLRIYPGTETRQGNSAKPVRKIFAIKY 59 Query: 76 VYAGKTLRMTIGNIND----WKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAE 131 G +T+G D D AR EA + GIDP A+ Sbjct: 60 RVRGIQRWLTLGEHGDGPDKLTADRARREAASVVVDARRGIDPGEARR------------ 107 Query: 132 SRKTKVTFSVAWEDYLQELRTGISAKTKRPYS-TRYIADHINLSSRGGESKKRGQGPTSA 190 R +T E YL++ K ++ R + + G + Sbjct: 108 -RIEGLTVKGLIELYLEKGPNDKPTKRDSSWAMDRTNLERHVVPLLGKMALDTVSRDHIT 166 Query: 191 GPLASLLNLPLSELTPDYIAAWLSTER--QNRPTVTAHAYRLLRAFIKWSNYQKKYQGII 248 G + S+ T + + + Y LRA W+ + + G Sbjct: 167 GMIRSITAGK----TAKDVKTKFRGRSIVKGGAGIADRTYSTLRATFNWAIDKGHFAGPN 222 Query: 249 PGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNN-----PIASAYLQVLLLT 303 P + RK+ P + L + Q + +A+ +L A ++LLLT Sbjct: 223 PCAKVE----RKLRPAV----ERFLSEAQAQDLIAALDALEADATISERQGAVYRLLLLT 274 Query: 304 GARREEIASLRWSDVDFKWSSMRIK------DKIEGERIIPLTPYVSELLNVLAQSPNSD 357 GARR EIA LRW++VDF + + G+R I L +L L ++ Sbjct: 275 GARRNEIAGLRWTEVDFDRRRLVLPPSRTKAGGRTGDRRISLNDMAYGILQRLYKTRG-- 332 Query: 358 VNKEGWVFRSNSKSGKI--IEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGI 415 + +VF ++ E + ++ L A+L + +H LR SF + A + Sbjct: 333 --RSQFVFPASKGDNGYATSESKIWRDKVLPKAKLEGVRIHDLRHSFASFALADGASLPM 390 Query: 416 VAQIMGHKPSALAEKHYRRRPLDLLRKWHEKI 447 + + +GH S E+ Y D +R E+I Sbjct: 391 IGKALGHANSRATER-YAHLSDDPVRALAERI 421 >UniRef50_B7H3T9 Phage integrase family protein n=9 Tax=Acinetobacter RepID=B7H3T9_ACIB3 Length = 410 Score = 208 bits (528), Expect = 5e-52, Method: Composition-based stats. Identities = 78/386 (20%), Positives = 140/386 (36%), Gaps = 47/386 (12%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMT 85 M+ SR K T + + L D+++ A R + K ++ + GK++R Sbjct: 1 MSTSRVKLTKSFIDQLELTPA----IYRDSEIIGFAIRVNNSYKTYIVEKKVKGKSIRCK 56 Query: 86 IGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWED 145 +G+ ++DAR A++ + +P K KI + + + A++ Sbjct: 57 LGDYEKITVEDARILAQQKLKELTDS-NPLSIKNNKILKNSLNEKIDQPY---LKEAFQV 112 Query: 146 YLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 Y+ R +AD+ + + L L L L ++T Sbjct: 113 YINHHEL----------KERTLADYREVIEK---------------YLIDLSELKLIDIT 147 Query: 206 PDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQG---IIPGDLAQDYNVRKMV 262 I + Q + R+LRA ++S + + IIP + +K + Sbjct: 148 EQRIEERYTQLSQYSYAKANLSMRVLRAVYRFSIKYYQNKNCEVIIPRINPVNLLKKKQL 207 Query: 263 PVSASKADDCLQKEQLKSWFSAV-----RSLNNPIASAYLQVLLLTGARREEIASLRWSD 317 + + + L W A+ R N +L L+LTG R E SL W + Sbjct: 208 WEEIPPRRNYIDVDNLTKWVQAIIEYKGRGQENETNKDFLLTLILTGLFRNECESLHWKN 267 Query: 318 VDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRS-NSKSGKIIE 376 +D + ++ + + Y+ L L + NK WVF S S+SG II Sbjct: 268 IDLEEGTLSFLNPYNN---VYYKIYMGNFLWHLMKKRRIQ-NKGEWVFPSVKSESGHIIN 323 Query: 377 PRSAHNRALVLAELPHISLHGLRRSF 402 + +L + LRR+F Sbjct: 324 ISKFRKKINEQCKLS-FTFQDLRRTF 348 >UniRef50_A3UTJ0 Site-specific recombinase XerD-like n=1 Tax=Vibrio splendidus 12B01 RepID=A3UTJ0_VIBSP Length = 411 Score = 208 bits (528), Expect = 5e-52, Method: Composition-based stats. Identities = 77/422 (18%), Positives = 143/422 (33%), Gaps = 48/422 (11%) Query: 29 SRQKFTFERLRRFTLPEGKKQTF---LWDADVTTLACRATS-GAKAFVFQSV--YAGKTL 82 ++ KFT + + + + + D +VT L G K F+ + + K Sbjct: 6 NKFKFTPSVINKIPPHDRRSKATNDERSDTEVTGLKLLVGKTGNKRFLLRYISPVTKKKS 65 Query: 83 RMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVA 142 + +G D + R +AR+L+ I GIDP++ + + T Sbjct: 66 SIALGQWPDMDLPTVRNKARKLKVQIADGIDPKLER----------DKQVETQVPTLYDF 115 Query: 143 WEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLS 202 + D + KT R R+ P+ + + L Sbjct: 116 FHDTFIVSKKSKGKKTWRDDIARF----------------EHWKHLHTKPIDKITGVHLH 159 Query: 203 ELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMV 262 ++ +A ++ L++ +K + V + Sbjct: 160 QVQAKLLATEYRPGKKYAAATVDRTIALMKTVLKEAYRLLDI-------PYIGDKVSLIN 212 Query: 263 PVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKW 322 P + L E+ + R + ++ +L LTG R E+ + +W D+ Sbjct: 213 P--DNMRTRYLTMEETAAVIRTSRDYYCRVTGNFIALLFLTGCRDSELRTRKWKDISLID 270 Query: 323 SSMRIKDKIEG-ERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAH 381 +M + D G +PLTP++ EL L +VF + I +PR+A Sbjct: 271 KTMFVPDTKNGSSMTVPLTPFMVELFRELLNMRQ---KGNPYVFFGRKERSHISQPRNAF 327 Query: 382 NRALVLAELPH---ISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLD 438 R A + + + H R SF T V V ++M HK + +K+ + Sbjct: 328 ARIKERAGIKNPHEVCFHVARHSFATNLIENGVDVLTVQRLMNHKDLSSTQKYVKHSQQK 387 Query: 439 LL 440 LL Sbjct: 388 LL 389 >UniRef50_Q1NM52 Phage integrase n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NM52_9DELT Length = 406 Score = 207 bits (526), Expect = 7e-52, Method: Composition-based stats. Identities = 87/445 (19%), Positives = 159/445 (35%), Gaps = 68/445 (15%) Query: 26 MALSRQKFTFERLR--RFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLR 83 M LS + R R RF L +GK L SG ++++ + + GK R Sbjct: 1 MGLSDAQLRKIRPRESRFELTDGKGLVLLV----------LPSGRRSWLLRYQFEGKPRR 50 Query: 84 MTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAW 143 +T+G D + AR + +++I G+DP + + + + + KT T S Sbjct: 51 ITLGEYPDMSLLQARNASEATRSIIKQGLDPALKR--------TEEKTAHKTSPTVSDLL 102 Query: 144 EDYLQ-ELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLS 202 +Y EL+ S K +R + + L ++ Sbjct: 103 TEYWDMELKESPSGKERRRLVEKDV-------------------------LPPWGKRKVA 137 Query: 203 ELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMV 262 E+T A L T R P +L ++ + G++ +K Sbjct: 138 EITRRDAALLLDTVRARAPVTGNRLQGVLVRMFNFAAER----GVLEHSPLMGLRKKKEQ 193 Query: 263 PVSASKADDCLQKEQLKSWFSAVRSLN-----NPIASAYLQVLLLTGARREEIASLRWSD 317 P S L +++K + A+ N ++ L+++LLTG R E+ + W + Sbjct: 194 PRS-----RVLADKEIKLLWDALALDNTAMDIYRVSKLALKMILLTGQRPGEVCGMTWDE 248 Query: 318 VDFK-WSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIE 376 +D W+ + K + +PL L ++ Q+ +VF+S+ I Sbjct: 249 IDGDTWNIPAERMKSKEPHNVPLGSMA---LEIIEQARRYSPRGSTFVFKSSHFKEGPIT 305 Query: 377 PRSAHNRALVLAEL----PHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHY 432 P S L + + H LRR+ T + V + +++GHK + + Sbjct: 306 PHSLSKAILRHWQEMGVTERFTPHDLRRTLRTRLAEIGVDDVVGERVLGHKLQGIMAVYN 365 Query: 433 RRRPLDLLRKWHEKIETWILNEAGI 457 R R+ E + I Sbjct: 366 RHSYDKEKRQALALWERKLREIVAI 390 >UniRef50_B7KUI7 Integrase family protein n=1 Tax=Methylobacterium chloromethanicum CM4 RepID=B7KUI7_METC4 Length = 414 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 80/440 (18%), Positives = 141/440 (32%), Gaps = 50/440 (11%) Query: 33 FTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNIND 91 T + GK++ DA + L +G K++ + AGK ++T+G Sbjct: 4 LTARAVELAKPDPGKRREVP-DAALPGLYLVVQPAGGKSWAVRYRAAGKPRKLTLGPYPR 62 Query: 92 WKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELR 151 + DAR AR + G DP K E ++Q + F DY++ Sbjct: 63 LGLADAREAARTALHAVAEGRDPAGEKQAARVEVAAVQ------TMRFGAVAADYIERYA 116 Query: 152 TGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAA 211 + + + + + + Sbjct: 117 KPRNRSWRE---------------------TESFLTRTLDATDKWQEKDVRAIGRKDVRD 155 Query: 212 WLSTERQNRPTV-TAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKAD 270 L ++ + LR F W+ + GI+ P D Sbjct: 156 ALDAVVARGASIHANRLFAALRRFFAWTVER----GILDASPMAGLKP----PSPEISRD 207 Query: 271 DCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFK---WSSMRI 327 L +L + + A + P +Q+L+LTG RR E+ W + D W+ R Sbjct: 208 RVLTDAELVAVWKAAGEVGYPF-GPVVQLLILTGQRRSEVVEAEWREFDLDGATWTIPRE 266 Query: 328 KDKIEGERIIPLTPYVSELLNVLA----QSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNR 383 + K + ++PL P ++L + +S F SK+ ++ SA Sbjct: 267 RAKNDRAHVVPLAPQAVKILRCIPCVGTRSRLLFTTTGETAFSGVSKATDRLQGLSA-KH 325 Query: 384 ALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKP---SALAEKHYRRRPLDLL 440 E+ LH LRR+F + + V +V + + H S + + R D Sbjct: 326 LPEGIEVEPWRLHDLRRTFASGCARLGVAVHVVEKALNHVSGTHSGIVGVYQRHSYGDER 385 Query: 441 RKWHEKIETWILNEAGITIK 460 R E + G K Sbjct: 386 RCAMELWAAHLDGLVGGAAK 405 >UniRef50_A3D8Y2 Phage integrase family protein n=4 Tax=Shewanella RepID=A3D8Y2_SHEB5 Length = 376 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 78/419 (18%), Positives = 151/419 (36%), Gaps = 59/419 (14%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTI 86 + K + P +K T +D RA SG + + + Y G I Sbjct: 1 MPSIKLQQSMIDNLPTP--QKITVFYDKYFPAFFMRAYPSGIRCYYVRFQYQGLRQLHVI 58 Query: 87 GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDY 146 GN ND +DDAR EAR+ + G+ A ++ + + Y Sbjct: 59 GNANDITLDDARLEARKHIDALRYGVVREPAPSLTLCAFAE-------------EFFPRY 105 Query: 147 LQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTP 206 + + ++R + TR+IA L ++PL+ LT Sbjct: 106 ARHWKPSTLLNSQRGF-TRHIA-------------------------PVLGDVPLAALTR 139 Query: 207 DYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSA 266 +I W ++ + LL ++ + + AQ + + Sbjct: 140 QHIEQWFDGMHASK-GMANRLLPLLSVMMQQAEVYEYR-------PAQSNPCKGFKRYKS 191 Query: 267 SKADDCLQKEQLKSWFSAVRSLNN--PIASAYLQVLLLTGARREEIASLRWSDVDFKWSS 324 + ++ L +E+LK + A+ S P+A L++L+LTG R E+ S++W+ D++ Sbjct: 192 THSERYLSEEELKRLWLALDSHEKASPVAVMVLRLLILTGCRCNEVCSVKWA--DYRQGH 249 Query: 325 MRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRA 384 + D G + + L+ + ELL+ Q + S S+ Sbjct: 250 WYLPDSKTGAKTVFLSSFARELLSDWPQVSEHLFWHQ-----SPSQPFTPARLDRFWRPF 304 Query: 385 LVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKW 443 L + +H LR ++ ++A + + +++GH K+ D+ + Sbjct: 305 RETIHLNDVRIHDLRHTYASIAVKHNINILTIGRLLGHALPETTLKYTHLAKRDVQQAA 363 >UniRef50_A7IMK8 Integrase family protein n=39 Tax=Bacteria RepID=A7IMK8_XANP2 Length = 467 Score = 204 bits (518), Expect = 6e-51, Method: Composition-based stats. Identities = 77/441 (17%), Positives = 140/441 (31%), Gaps = 61/441 (13%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYA-GKTLRMT 85 + + K T + ++ L D + + T G K F+ V G+ + Sbjct: 1 MPKIKLTKTAVDAAN--PQERDYELRDTTIPGFLVKITPTGRKTFMIAYVANNGQRRKPA 58 Query: 86 IGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWED 145 IG + ++ AR A+ + G DP + + ++ K F D Sbjct: 59 IGRYGEITVEQARRIAQDWLAEVRRGADPSAER--------TASRQAPTVKELFDRFITD 110 Query: 146 YLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 Y + + K+ R + R+I L +L ++ + ++T Sbjct: 111 YSESRNKPSTVKSNRGFGKRHI-------------------------LPALGHMKVPDVT 145 Query: 206 PDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSN-YQKKYQGIIPGDLAQDYNVRKMVPV 264 IA + ++ P +R + + + G P R + Sbjct: 146 RSDIANLMKKMSKS-PVNANRVLSAVRKMFNMAEVWGMRPDGTNPC--------RHIPKF 196 Query: 265 SASKADDCLQKEQLKSWFSAVRS-----LNNPIASAYLQVLLLTGARREEIASLRWSDVD 319 + +++ F + L +P +++ AR EI L WS VD Sbjct: 197 PERGKTRLITDAEMRKLFEYLDRAEAEGLEHPFIILAIRLQFEFAARMSEIIELEWSWVD 256 Query: 320 FKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRS 379 F + D G P+ L + +V S K + P + Sbjct: 257 FDNRRVVWPDSKTGGMSKPMNAEALRLFET-----APLLEDSPFVCPSVFDPKKAMSPYT 311 Query: 380 ---AHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRP 436 R L A LPH+ HG+R T VP + + HK + + Y Sbjct: 312 YYQGWKRILKRAGLPHVGTHGIRHRSATDIANSGVPVKVGMALTAHKTVTMFMR-YVHTE 370 Query: 437 LDLLRKWHEKIETWILNEAGI 457 D +R E + +N G+ Sbjct: 371 DDPVRAAAEAVTQRRMNVIGV 391 >UniRef50_A3VQY7 Phage integrase n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VQY7_9PROT Length = 421 Score = 204 bits (518), Expect = 7e-51, Method: Composition-based stats. Identities = 77/453 (16%), Positives = 147/453 (32%), Gaps = 69/453 (15%) Query: 30 RQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYA----GKTLRM 84 + K T + K +WD ++ R +G KA++ K R+ Sbjct: 7 KVKITKRVVDLAD--PKKSPYIIWDKELPGFGLRVAANGRKAYIVSYRVGVGRGAKQRRV 64 Query: 85 TIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWE 144 +I N + AR EA+ G D R + Sbjct: 65 SIAASNTMTCEMARKEAQVYLANARLGEDRREEIDAAAKAKADITVAKA----------- 113 Query: 145 DYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSEL 204 ++ + + +R R + N SR A + ++ N L EL Sbjct: 114 --IEIWHAEAAHRNRRTGKARDPRNIRNEMSR-----------MDAHLIPAIGNKKLREL 160 Query: 205 TPDYIAAWLSTERQNRPT------------------VTAHAYRLLRAFIKWSNYQKKYQG 246 T + R ++ + + K G Sbjct: 161 TRRDVELLRDDITAGRTAVVQKTKKHGVRRATGGTGTAKRTMVSFKSVLAY----MKDIG 216 Query: 247 IIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIAS----AYLQVLLL 302 + ++A + + K + L + + +++LL+ Sbjct: 217 FVDQNVAANLRL-----APDGKKERYLSVAEAHRLGKCLDEWEQMDRRMTGITIIRLLLM 271 Query: 303 TGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEG 362 TGAR +EI L+WS++DF S R ++ G I P++P V ++L L + + Sbjct: 272 TGARTKEIEELKWSEIDFDRSFFRFEETKSGRSIRPISPQVLDILKGLPRLHPT------ 325 Query: 363 WVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGH 422 WVF +N+ +G ++ A LP + H LR SF + A + ++ ++GH Sbjct: 326 WVFLNNAGTGPYCGTQAVWRLVREEAGLPDVRKHDLRHSFASFALANGLSLPVIGTLLGH 385 Query: 423 KPSALAEKHYRRRPLDLLRKWHEKIETWILNEA 455 ++ Y + + + ++N Sbjct: 386 SRPETTQR-YAHLSDRHAMEAAKSVGLAVMNAL 417 >UniRef50_A7HPZ7 Integrase family protein n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HPZ7_PARL1 Length = 389 Score = 203 bits (517), Expect = 9e-51, Method: Composition-based stats. Identities = 84/442 (19%), Positives = 151/442 (34%), Gaps = 71/442 (16%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTIGNI 89 + T L+ P K Q D + R + G K+FV V+ R TIG Sbjct: 1 MRLTDISLKTLQ-PPVKGQVTYADDTLPGFGVRVSQGGVKSFVV--VHGRNRKRTTIGRY 57 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 + DAR A+++ G + F + +L Sbjct: 58 PTISLQDARKAAKQILAERTLGKH-------------------EAPPIDFEAGLKLFLAA 98 Query: 150 LRTGISAKTK-RPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDY 208 K + R + R + H L SL + L + Sbjct: 99 HFPENYPKPRTRAETKRQLEKHF---------------------LPSLRHEKLEHIQARE 137 Query: 209 IAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 I+ + + P HA+ ++R F W+ + G + + R P + Sbjct: 138 ISRIIDKMHKT-PGEARHAFAVIRLFFNWAFRR--------GYVDRSPCERLQAPKQSLP 188 Query: 269 ADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIK 328 D L ++++++ R + S +Q+LLLTG RR EIASL+ +DF ++ + Sbjct: 189 RDRVLTQDEIRTVLGHARERDTTFNS-IVQLLLLTGQRRGEIASLQADWIDFDSRTITLP 247 Query: 329 ---DKIEGERIIPLTPYVSELL-NVLAQSPNSDVNKEGW---------VFRSNSKSGKII 375 K + + P +L L Q+ S + + +F + K Sbjct: 248 ATVTKNKRQHAFPFGEMAEVILKRALLQAQQSREERREYEDADEKALLLFPARGKHTAFD 307 Query: 376 EPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGH---KPSALAEKHY 432 + H +LH LRR+ T + VP + +++ H S + + Sbjct: 308 GWSKGKPNFDKGCPIDHWTLHDLRRTCATNLAALGVPVHVTEKLLNHISGTTSGIVAVYQ 367 Query: 433 RRRPLDLLRKWHEKIETWILNE 454 R +D +R E+ E + ++ Sbjct: 368 RHAYMDEMRDAIERWELHLRSQ 389 >UniRef50_A3VAJ4 Site-specific recombinase, phage integrase family protein n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VAJ4_9RHOB Length = 392 Score = 203 bits (517), Expect = 9e-51, Method: Composition-based stats. Identities = 79/434 (18%), Positives = 143/434 (32%), Gaps = 63/434 (14%) Query: 30 RQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGN 88 +Q T + L P K+ + D V L R T+GAK F G R+ IG Sbjct: 8 KQMLTTKSLDAMP-PATTKRYEVRDQKVNGLHVRVSTTGAKVFYTLVRPNGSRRRIKIGP 66 Query: 89 INDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQ 148 + DAR A + ++ G E E + T +++ Sbjct: 67 YPVVSLADARRRAMEIARDVELG------------EFEKTPEVPEASADTLGEMIPKFIE 114 Query: 149 ELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDY 208 + KR S + L + P+ ++ Sbjct: 115 LHAKPNTKDWKRTESVLH-------------------------KFDGLKDRPIDQIRRQD 149 Query: 209 IAAWLSTERQNR-PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSAS 267 ++ L N PT A ++ + W + GD+ P Sbjct: 150 VSKVLDGIIANGTPTRANRALSAIKKLMNWCVMR--------GDIETSPVALLRPPTREV 201 Query: 268 KADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI 327 + D L ++++ + + + P +L++LL++G RR E+A +RWS+++ + Sbjct: 202 QRDRVLSDAEIRAIWQHSDAEDYPF-GPFLKLLLISGQRRSEVAGMRWSELNLDEGIWEL 260 Query: 328 KD---KIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRA 384 K I+PL ++L L + +SD +VF + +S I R Sbjct: 261 PANRVKNARLHIVPLPVQAVDILRGLHRFLDSD-----FVFTTTGRS-AISGFGRLKERV 314 Query: 385 LVLA--ELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKP---SALAEKHYRRRPLDL 439 P H RR+ T + V ++ + HK S + + R + Sbjct: 315 DTALPEGTPDWRFHDFRRTASTGMAKLGVMPHVIDAVTNHKSGVVSGVGATYNRYTYFNE 374 Query: 440 LRKWHEKIETWILN 453 R+ + I Sbjct: 375 KREALAQWAAHIDE 388 >UniRef50_A3WST9 Probable integrase protein n=2 Tax=Bradyrhizobiaceae RepID=A3WST9_9BRAD Length = 422 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 84/432 (19%), Positives = 160/432 (37%), Gaps = 34/432 (7%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSV-YAGKTLRMTIGN 88 K T + + F+WD ++ R SGAK+F+ Q G++ R+T+G Sbjct: 2 VKITKRVVDAAEASGADR--FVWDDELPGFGLRVKKSGAKSFLVQYRNANGRSRRLTVGR 59 Query: 89 INDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQ 148 +++AR A+ + G+DP K + + +T +YL Sbjct: 60 YGVLTVEEARRAAKISLADVLKGVDPAENKKLD------------RGAITIETLCREYLD 107 Query: 149 ELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDY 208 + G+ + R G+ A + S ++ Sbjct: 108 KAERGLILTRRGEAKRRSTIYTDKGRVERHIVPILGKRTVKDVTTADIRRFQQSVISGKT 167 Query: 209 IAAWLSTERQN-----RPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVP 263 A + +R A LL + ++ +G P + A+ +R Sbjct: 168 AADIKTKKRGRAIVTGGKGTAARTMGLLGGILSYAVN----EGYRPDNPARGI-IRPKDE 222 Query: 264 VSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWS 323 + DD + K +A + N ++V+ LTG RR EI L +++DF S Sbjct: 223 TREWRLDDAGYRALGKKLTAAEANAVNWQPILIMRVIALTGCRRGEIERLLKTEIDFARS 282 Query: 324 SMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRS-NSKSGKIIEPRSAHN 382 ++R+ D G+ I P+ +L + +K +VF + ++ + + A Sbjct: 283 ALRLGDSKTGKSIRPIGSAAIAVLK-----QACEKSKSKYVFSALTNEKKRYVGLPKALA 337 Query: 383 RALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRK 442 + A +P ++ HGLR SF + AE + + ++GH ++ E Y + L Sbjct: 338 SIVGDA-VPGLTPHGLRHSFSSTAEDLGFSLPTIKALLGHAGGSVTEG-YIHKIDTALVA 395 Query: 443 WHEKIETWILNE 454 ++I + I Sbjct: 396 AADRIASHIETA 407 >UniRef50_A5EBE3 Putative phage related integrase n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EBE3_BRASB Length = 434 Score = 203 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 77/469 (16%), Positives = 150/469 (31%), Gaps = 88/469 (18%) Query: 32 KFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTIGNI- 89 K T + + LP +D ++ R SG+ ++ + R+ Sbjct: 7 KRTVDAIAAGPLP-----AIQYDVELRGFGVRIGASGSLSWFIEYRPGAGGRRVAKRRYY 61 Query: 90 ---NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDY 146 ++ + AR A+ L + G DP + + +TFS E Y Sbjct: 62 FGSREFTPEQARQTAKELLANVALGGDPMKDRLH------------ERQSLTFSEFAERY 109 Query: 147 L-QELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 L +E + T Y + H N + L L +++ Sbjct: 110 LSEEAEPKLKPGTVANYRIA-VRRHAN---------------------PEIGKLKLHKIS 147 Query: 206 PDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVS 265 +A + + + + +++ + + Sbjct: 148 NADLARLHTKIGKTSTVNANRTLECVSSIFRYAVTCDIV-------PVGHNPTKGIRAFR 200 Query: 266 ASKADDCLQKEQLKSWFSAVRSLN----------------------------NPIASAYL 297 ++ + L ++L SA+R + +A L Sbjct: 201 ENRRERFLNSDELARLGSAIREAETVGIPYEIDETKPTSKHAPKPENRRTKIDSYTAAAL 260 Query: 298 QVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSD 357 ++L+LTGAR EI L+W VDF+ + + D G + I L +L+ L + Sbjct: 261 RLLILTGARLREILHLKWDYVDFERGLLLLPDSKTGRKAIVLNVPALAVLSSLDR----- 315 Query: 358 VNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVA 417 K +V S + + A+L + LH LR + ++ + I+ Sbjct: 316 --KGQYVIFSEQEDKPRADLNRPWRTISARAKLQGVRLHDLRHTHASVGAGAGLGLPIIG 373 Query: 418 QIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWILNEAGITIKNNVDMR 466 +++GH ++ ++ Y D L+K KI I G + R Sbjct: 374 KLLGHTQASTTQR-YAHLDSDPLQKASNKIAASISAAMGDDAGHVAQSR 421 >UniRef50_A4U0F6 Phage integrase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U0F6_9PROT Length = 427 Score = 203 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 89/462 (19%), Positives = 154/462 (33%), Gaps = 64/462 (13%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTI 86 + + K T + R T P Q +D + R + +G +++ + GK R+TI Sbjct: 1 MPKMKLTALSVARLT-PPESGQVDYFDTVLPAFGVRLSHAGTRSYFVMTRVGGKVARLTI 59 Query: 87 GNI------NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFS 140 G + +AR A L G DPR K Q K TF Sbjct: 60 GKAKARDDSPGLTLAEARKRAGELTEQAGIGHDPRQIKKA------EKQVNEEKAANTFR 113 Query: 141 VAWEDYL-QELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNL 199 VA E ++ Q + ++A TK Y A+ N Sbjct: 114 VAAERFMRQHVEPRLAASTKMDYKWALF----------------------GQDTAAWANK 151 Query: 200 PLSELTPDYIAAWLS-TERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNV 258 P+ +T + L T + P L F W + + + Sbjct: 152 PVDSITRADVRRALDATIERGSPAGANKLLAYLSKFFNWCAERDLLE--------VPPTI 203 Query: 259 RKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDV 318 R P S + L ++ ++A + + ++LLLTG RR E A +R S++ Sbjct: 204 RIKPPSPKSVGERTLNHAEVADVWAAFEAEGG-LFCDLFKLLLLTGQRRTETAGMRLSEI 262 Query: 319 -DFK-----WSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSG 372 D W + K +PL+P V ++ + S Sbjct: 263 SDLDGEKPVWEIPGNRTKNSRPHAVPLSPQVVAIIKGRPIVGDLGFLLTTTGTTGTSGYS 322 Query: 373 KIIEPRSAH-NRALVLAE---LPHISLHGLRRSFGTLAEW-VEVPTGIVAQIMGHKPS-- 425 E A + A +P +LH LRR+ T+ V + +V + H Sbjct: 323 NAKERVDAWIAKRREEAGEQPMPRWTLHDLRRTMVTMMNEHVGIAPHVVEACVNHVSGMA 382 Query: 426 --ALAEKHYRRRPLDLLRKWHEKIETWILNEAGITIKNNVDM 465 +A + + +D R+ E ++ + I+ K+ ++ Sbjct: 383 KAGVAGVYNKALYMDDRRRALEAWAAYL--DGIISPKDTTNV 422 >UniRef50_A5WEX8 Phage integrase family protein n=2 Tax=Psychrobacter RepID=A5WEX8_PSYWF Length = 425 Score = 203 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 84/448 (18%), Positives = 165/448 (36%), Gaps = 52/448 (11%) Query: 30 RQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIGNI 89 + K T + + L E D +T A + +K ++ K R + + Sbjct: 2 KVKLTKKFIDDLPLTE-SGYKIYPDEALTGFALYVGTKSKRYILNRRINKKMYRTLVDEV 60 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 + + AR +A + I G P + + + T A+ +Y +E Sbjct: 61 HMTTLTAAREKATAMMVNIRQGSHP--YEGLHELPEIEDEESKAPQVPTLLEAY-NYFKE 117 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 +++ +S T Y + + G L+ L+ PL+++T I Sbjct: 118 MKSELSDGTITTYDRQIL-----------------------GKLSDWLDKPLNDITKAMI 154 Query: 210 AAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQG---IIPGDLAQDYNVRKMVPVSA 266 + N R LR+ + + II + N +K Sbjct: 155 SKKHKEISANSKAQANATMRALRSVWNYCRDSFLDENEDFIIKEQPIKILNAKKDWNNIK 214 Query: 267 SKADDCLQKEQLKSWFSAV----------RSLNNPIASAYLQVLLLTGARREEIASLRWS 316 + +E L +F + ++ ++ A + + +LTG R E +L WS Sbjct: 215 PRTRHV-AEENLGQFFKTLLKYTDRSSHMQAPHSNNARDLMLMFMLTGVRLNEGQNLEWS 273 Query: 317 DVDFKWSSMRIKDKIEG-ERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSN--SKSGK 373 DVD + +D G + +PL ++L L + + WVF S+ + G Sbjct: 274 DVDLDNGYIVFRDTKNGSDYDMPLG----KILAALLKERKRLSDGSRWVFPSSQSNTDGP 329 Query: 374 IIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKH-- 431 I + ++ R L + +I+ H LRR+FGT+A + + ++ +++ H+ + + Sbjct: 330 ITDLTRSYKRIGELNGM-YITPHDLRRTFGTVANSLNINYPVLKRLLNHRETKATDDVTL 388 Query: 432 -YRRRPLDLLRKWHEKIETWILNEAGIT 458 Y + LR +IE +A +T Sbjct: 389 QYVQVSQKQLRTALNQIEKLYCKQAEMT 416 >UniRef50_B0UGI0 Integrase family protein n=1 Tax=Methylobacterium sp. 4-46 RepID=B0UGI0_METS4 Length = 413 Score = 201 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 81/448 (18%), Positives = 156/448 (34%), Gaps = 69/448 (15%) Query: 33 FTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNIND 91 T + + R+ P +++ + DA + L SG K++ + + + TIG Sbjct: 2 LTVQSVERYK-PNPERRLEIPDATLPGLYLIVQPSGKKSWAIRYRINRQPRKFTIGPYPL 60 Query: 92 WKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELR 151 + + AR AR+ + G+DP K A A + + + T Sbjct: 61 FDLSAARERARQALQMAARGLDPYREKKAAEAAAIEAKDQVSRVVAT------------- 107 Query: 152 TGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAA 211 Y+ H+ + + G + ++ +G L + + ++ + A Sbjct: 108 --------------YVERHLKVKGKPGYA-EQAEGLLRNHVLPHWGHRRIGDIGRADVIA 152 Query: 212 WLSTERQNRPTV-TAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKAD 270 + T + RA ++ + + + P+ D Sbjct: 153 LVDGLTDRGMTTGANRVFATTRALFNFALGRDL--------ITSTPFLGLKPPLPNPSRD 204 Query: 271 DCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFK-WSSMRIKD 329 L +++ + + P +Q+LLLTG RR E + WS++D W+ + Sbjct: 205 RVLSDAEVRWAWLCAERIGFPF-GPMVQLLLLTGTRRNETGEMVWSELDGTVWTIPGART 263 Query: 330 KIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAE 389 K E ++PL P E+L + + + G+VF N + SA R L A Sbjct: 264 KNSLEHVVPLPPAAIEILAAVPRI----AGRPGYVFTRNGST--PASDLSAGKRRLEAAM 317 Query: 390 L-------------------PHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKP---SAL 427 L P +LH LRR+ + + +V ++ H+ S + Sbjct: 318 LTVAQSEAARRGEDPKAVTIPRWTLHDLRRTAASGMARLGTDPHVVEAVLNHRSGTISGV 377 Query: 428 AEKHYRRRPLDLLRKWHEKIETWILNEA 455 A + R L+ R E + + A Sbjct: 378 AAVYNRYAYLNEKRAALETWGKHVTSLA 405 >UniRef50_Q2GBL9 Phage integrase n=3 Tax=cellular organisms RepID=Q2GBL9_NOVAD Length = 417 Score = 201 bits (511), Expect = 5e-50, Method: Composition-based stats. Identities = 89/453 (19%), Positives = 165/453 (36%), Gaps = 63/453 (13%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAGK---TLR 83 ++ K + + FLWD D+ + T GA ++V Q G+ T R Sbjct: 1 MATGKISKRSIDALR--PNASNQFLWDTDLKGFGAKITPAGAISYVLQFRMGGREASTRR 58 Query: 84 MTIGNIND-WKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVA 142 TIG W ARAEA RL LI G+DP + A+ ++ + +A Sbjct: 59 YTIGAHGSPWTPTTARAEAERLLLLIGQGVDP-------------VDADKQRRREAVDLA 105 Query: 143 WEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLS 202 + +Y + R R I ++ L L Sbjct: 106 FANYAERFARSCKGDGWRRLVERAIRLYLT---------------------PVLGKKALP 144 Query: 203 ELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMV 262 + + + ++ + + +LR +W+ + GDL + Sbjct: 145 AINRTDVVSVFDNMPADQVANRRNVFAVLRRLFRWAVSR--------GDLDRSPMEGMET 196 Query: 263 PVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDV---D 319 P + L ++L+ ++A + +++L+ TG RREE++ +RWS++ D Sbjct: 197 PPPVKARERWLSDDELRLIWNAAPECHRCF-GPIVRLLIATGQRREEVSGMRWSELSRTD 255 Query: 320 FKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSG--KIIEP 377 W+ + K IPL L+ A + ++G VF +++ +G + Sbjct: 256 KLWTLPGDRTKNGEPNTIPLNDLAVAELD--AAAGGDKWPRKGRVFATSTGAGFTGYAKG 313 Query: 378 RSAHNRALVLAE---LPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGH---KPSALAEKH 431 + +R + LAE LP LH LRR+ T + + V + ++ H S +A + Sbjct: 314 KDKLDRLIELAEGEPLPPWRLHDLRRTLATNFQRLGVRFEVTEAVLNHVGGSRSGVAGIY 373 Query: 432 YRRRPLDLLRKWHEKIETWILNEAGITIKNNVD 464 R + R+ + + + N Sbjct: 374 QRHDWKEEKRQALDDWNSHLEQILMRPSPGNRQ 406 >UniRef50_Q1VBR2 Site-specific recombinase XerD-like protein n=1 Tax=Vibrio alginolyticus 12G01 RepID=Q1VBR2_VIBAL Length = 396 Score = 201 bits (510), Expect = 6e-50, Method: Composition-based stats. Identities = 75/427 (17%), Positives = 153/427 (35%), Gaps = 54/427 (12%) Query: 30 RQKFTFERLRRFTLPEGKKQTF---LWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMT 85 R KFT ++ + ++ ++++ +G K ++ + G+ ++ Sbjct: 4 RFKFTTNKIASLPPNDPNSRSTEAEYSCSELSGFKVLVGKNGRKKWLVRYTLNGRKGSLS 63 Query: 86 IGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWED 145 +G + + DA +A+R + ++ G+DP+ + + T S Sbjct: 64 LGTFPEVSLADAWKQAQRTKLMVAEGVDPK-------------NSTVKPDIPTVSE---- 106 Query: 146 YLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 Y IS K+ + R ++ L + + Sbjct: 107 YFNNHFIKISKSRKKSW-------------RHDIARFNHCVEIWDISYDQLRVSHIQSMV 153 Query: 206 PDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVS 265 I ++ + LL+ + + IP A+ K+ P + Sbjct: 154 AGLIDKVHLRGKKLSRSTINRVLCLLKLMGRMIEEEY----SIPNVAAR----VKLFPET 205 Query: 266 ASKADDCLQKEQLKSWFSAVRSLN-NPIASAYLQVLLLTGARREEIASLRWSDVDFKWSS 324 ++ + L +++K F +R + PI S ++ +L + G R + + RW ++D + Sbjct: 206 GAR-ERWLSPQEIKRIFEELRKPDYCPIRSRFIILLFMLGCRERSLRAARWPNIDLENGV 264 Query: 325 MRIK--DKIEG-ERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAH 381 MRI D G + I LTP + L + +VF + I +PR Sbjct: 265 MRIPREDSKNGFQHQIQLTPQAIQEFRFLLRLKK---KGNPYVFPGQKEKSHISQPRHLF 321 Query: 382 NRALVLAELP---HISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLD 438 N+ L I H R S+ + V G++ Q++GHK + + Y R + Sbjct: 322 NKIKKELMLKEPEQIVFHTARHSYASSLISAGVDVGVLKQLLGHKSISSTMR-YARAGNE 380 Query: 439 LLRKWHE 445 LR+ + Sbjct: 381 SLRQSSQ 387 >UniRef50_C6KUG0 Tyrosine recombinase n=1 Tax=uncultured bacterium RepID=C6KUG0_9BACT Length = 427 Score = 200 bits (509), Expect = 9e-50, Method: Composition-based stats. Identities = 114/448 (25%), Positives = 179/448 (39%), Gaps = 50/448 (11%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIG 87 ++R + T +R+RR +G Q FL+D D+ LA RAT GAKAFVF+ +T+R+TIG Sbjct: 1 MNRTRLTPDRIRRLACTDG--QAFLFDTDMQRLAVRATKGAKAFVFEGYLNRRTVRITIG 58 Query: 88 NINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKV--------TF 139 + DW +D AR EARRLQTLID G+DPR KA + + +A T Sbjct: 59 AVQDWTLDAARKEARRLQTLIDRGVDPREQKAAEREARAARKAAEAAACRAADEARRYTL 118 Query: 140 SVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNL 199 + Y LR K+ R + + H+ LL Sbjct: 119 GALLDAYTGHLRARGKTKSARDAAGAF-KRHLP---------------------PRLLMQ 156 Query: 200 PLSELTPDYIAAWLSTERQNRPTVTAHAYR-LLRAFIKWSNYQKKYQGIIPGDL----AQ 254 P +T +AA + ++ T A R L A + + + + +P +L Sbjct: 157 PAKGITSRELAAVVRAVHESGKTRMAGVLRSYLLAAFNAARHAE-FDTSLPAELIGFEVT 215 Query: 255 DYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLR 314 + P+ + D L +L+++ + + ++P A LL G R ++ LR Sbjct: 216 ANPAELVKPIPVGRRDRVLSLAELRAYVAHLG--DDPTDCALRLALLAGGQRMAQL--LR 271 Query: 315 WSDVDFKWSSMRIKDKIE-----GERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNS 369 + D+ +++R+ D E ++PL P +EL LA S W+F + Sbjct: 272 ATVNDWDGATLRLTDPKGRRSTPREHLLPLAPLAAELAGRLATRARS--RGVPWLFSHGT 329 Query: 370 KSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAE 429 K P L +RR+ TL + V AQ++ H S + Sbjct: 330 KPMDPATPGKRVAEISARLNGEPFDLRDIRRTCETLLAGLGVSRDTRAQLLSHGLSGVQA 389 Query: 430 KHY-RRRPLDLLRKWHEKIETWILNEAG 456 HY R E + AG Sbjct: 390 AHYDRHSYTAEKHAALLAWERHLTEAAG 417 >UniRef50_Q5LU39 Site-specific recombinase, phage integrase family n=1 Tax=Ruegeria pomeroyi RepID=Q5LU39_SILPO Length = 375 Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 84/433 (19%), Positives = 159/433 (36%), Gaps = 70/433 (16%) Query: 30 RQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIGNI 89 R + T +++ L E Q WD R ++ +K+++ + K R T+G Sbjct: 2 RVRLTDLAVKKLPLSEN-GQVTYWDELTPNFGIRCSTRSKSYIV--LLGEKRRRKTLGRY 58 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 D + DAR +A++L + G Q V F A +L++ Sbjct: 59 PDLSLADARKQAKQLLSANAMG---------------EGQVTPHAPVVAFEEAKARFLKD 103 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 +T Y R + H N + E+ + Sbjct: 104 CEGRNKPRTVADYR-RLLNRHFNFKG------------------------DVREVYRQQV 138 Query: 210 AAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKA 269 +S P+ +HAY +R + W D++V + S+ Sbjct: 139 MRVVSGLSAT-PSEQSHAYVAIRTMMNWCVRHGL----------VDHSVVPPMKQKTSER 187 Query: 270 DDCLQKEQLKSWFSAVRSLNNPIA-SAYLQVLLLTGARREEIASLRWSDVDF-KWSSMRI 327 D L +++L+ + +R+ P A +Q+L+LTG RR EI +R S + + + + Sbjct: 188 DRVLSEDELRKVY--LRAQETPFAFGPIVQLLILTGQRRTEIGQMRRSWISHGEVAFPKG 245 Query: 328 KDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVL 387 K + E PL+P +++ L N +F + + K + H + Sbjct: 246 FAKNKREHRFPLSPLSQQVVADLP-------NTGDLLFPAATDFEKAFTTWAWHKKRFDE 298 Query: 388 A--ELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKP---SALAEKHYRRRPLDLLRK 442 + +LH LRR+F T+ + P + +++ H S +A + R D +R Sbjct: 299 GLEAVEPYTLHDLRRTFATIHAKIGTPIHVTEKLLNHVSGTISGVAAVYNRHSYADEMRH 358 Query: 443 WHEKIETWILNEA 455 + +T++ A Sbjct: 359 AASQFDTYLTELA 371 >UniRef50_A6X006 Phage integrase family protein n=2 Tax=Alphaproteobacteria RepID=A6X006_OCHA4 Length = 426 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 85/464 (18%), Positives = 156/464 (33%), Gaps = 77/464 (16%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSG-AKAFVFQSVYAGKT---LRMTI 86 K T + K WD+++ + T K F+ G T + TI Sbjct: 5 VKLTKSYIDNLR--PTDKDAIYWDSELKGFGVKVTPKNRKVFLVMHRPKGHTGAAKKYTI 62 Query: 87 GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDY 146 G +W + AR AR + T G D + V+ RK+ + +++ Sbjct: 63 GTYGEWTVQQARDRAREVLTEGSKGNDVGAIERVERQ---------RKSSDILTDLVDEF 113 Query: 147 LQELRTGISA--KTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSEL 204 L++ +TKR ++ H + + Sbjct: 114 LKKHAAQNKTHDETKRILERELLSKH--------------------------GKKSIHVV 147 Query: 205 TPDYIAAWLSTERQNR-PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVP 263 T I + L R P + +R F+ W + II A ++ P Sbjct: 148 TKHDILSVLEGIRDRGAPYMANRVLAAIRKFMNWCVSRD----IIAISPANGISL----P 199 Query: 264 VSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWS 323 D L ++ ++ A +S+ P +++L LT RR+E+ +RWS+++ + Sbjct: 200 TREVSRDRVLTADETRAALMAAKSVGYP-YGNIVELLFLTAQRRDEVGDMRWSELNLDKA 258 Query: 324 SMRIKD---KIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKS-------GK 373 + I K + L+ LL+ + + ++D + VF + + K Sbjct: 259 TWTIPAERVKNGKAHDVHLSKDALALLHSIPRFVSADNVESDLVFTTTGNTPFSGYSKSK 318 Query: 374 IIEPRSAHNRALVLAE----------LPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHK 423 + +AE L LH +RR+ T + V + I+ HK Sbjct: 319 TTLDKKMLEVLQKMAEDKGVNPELVKLTPWRLHDIRRTVTTELSKLGVAIHVADAILNHK 378 Query: 424 P---SALAEKHYRRRPLDLLRKWHEKIETWILNEAGITIKNNVD 464 S +A + + + + K LN+ T N VD Sbjct: 379 SGVISGVAAVYQKNAFIQERQDALNKWCDH-LNKICATTPNGVD 421 >UniRef50_Q3A6E0 Site-specific recombinase/integrase n=3 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A6E0_PELCD Length = 482 Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats. Identities = 76/432 (17%), Positives = 147/432 (34%), Gaps = 61/432 (14%) Query: 31 QKFTFERLRRFTL--PEGKKQTFL-WDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTI 86 T + + P G + T + L G K ++F+ G+ + I Sbjct: 94 IPLTKKAIDGLPSHDPAGTQATATEYSTGEPGLHICVNMRGNKRWLFRYRLYGRKKVVAI 153 Query: 87 GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDY 146 G + A+ A +Q + G E +K + TF Y Sbjct: 154 GPYPSIEPPLAKQMANEMQRNLALG------------ERVVSPRAQQKQQKTFGEFARKY 201 Query: 147 LQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTP 206 L+ + +TK+ + Y + + +PL+ LTP Sbjct: 202 LEHAK-----QTKKSWKDDY-------------------NKLTNQIIPKWGEVPLTCLTP 237 Query: 207 DYIAAWLSTERQN-RPTVTAHAYRLLRAFIKWSNYQKKYQGIIP-GDLAQDYNVRKMVPV 264 I +L+ + T Y +L + K+ I P + + + P Sbjct: 238 KEIQGYLNQVKARTSGTNANRHYAVLNVLYNLAV---KWGEIDPWKNPMPGVSKFRDNP- 293 Query: 265 SASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSS 324 L E+ K + +A+ +A+ L++LL TG R E+ +W DV + + Sbjct: 294 ---GRTRYLSMEECKRFLAALEEAPGQLAACALRLLLFTGCRAGEVLKSKWEDVSMEGRT 350 Query: 325 MRIKDKIEGE-RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNR 383 M + + G+ R++ L + L N ++F +S+ + R Sbjct: 351 MLLPETKNGKSRVVHLNSLSLAEIEKLKDFRNPS---NPYLFPGSSEDKPLGTVRKTFEH 407 Query: 384 ALVLAEL--PHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYR------RR 435 AL LA L + +H LR + +L + + +GH + E++ + Sbjct: 408 ALKLAGLQGTDVVIHTLRHTHASLLANLGESLETIKVSLGHSSVKMTERYAHISGSKTKD 467 Query: 436 PLDLLRKWHEKI 447 D L + +++ Sbjct: 468 ASDHLAEQLKEV 479 >UniRef50_B9JF62 Tyrosine site-specific integrase/recombinase protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JF62_AGRRK Length = 431 Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats. Identities = 71/450 (15%), Positives = 135/450 (30%), Gaps = 72/450 (16%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYA--GK---T 81 + K + L G+K +D + + +GAK+++ + G+ Sbjct: 1 MPTIKISRRALAEIE--PGEKPVIYYDNALKGFGLKVMPTGAKSWIIEYRPGAGGRGVSK 58 Query: 82 LRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSV 141 R+ IG + + AR EA R + G DP A+ + + Sbjct: 59 KRIKIGTLATHSPEAAREEASRTLARVTLGSDPAAARTD------------ERKGQVVAA 106 Query: 142 AWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPL 201 E +L+E + +I + Sbjct: 107 VAETWLEEHVLIKRKPKTYNEYKLAVERYIKPVLGSLKFALVEPSDVLRMQ--------- 157 Query: 202 SELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKM 261 I + T+ A L A W+ K V + Sbjct: 158 -----AKIIRGKVNKANGGRTMANRALATLSAIYGWAQDLKIV-------PLGFNPVTSI 205 Query: 262 VPVSASKADDCLQKEQLKSWFSAV----------------------------RSLNNPIA 293 ++ + L E++ S +A+ R++ A Sbjct: 206 ERFKENQIERFLTSEEIGSLATALTEAETIGLPYEVDETKAKAKHANRVENRRTVYGEHA 265 Query: 294 SAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQS 353 A +++ L TG RR EI L WSDVD + + + D G++ + L+P +L L + Sbjct: 266 IAAIRLYLFTGCRRSEILRLTWSDVDLERGILFLPDSKTGKKPVILSPQAQAILTNLTRV 325 Query: 354 PNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPT 413 + + A L + LH LR ++ ++ Sbjct: 326 GKYVIAGAD---AGTKDEAPRADIDRPWKAVTRRAGLHKLRLHDLRHTYASIGAGGGQGL 382 Query: 414 GIVAQIMGHKPSALAEKHYRRRPLDLLRKW 443 I+ +++GHK A +++ + R Sbjct: 383 PIIGKLLGHKNIATTQRYAHLDTNPMKRVA 412 >UniRef50_B0TQV5 Integrase family protein n=1 Tax=Shewanella halifaxensis HAW-EB4 RepID=B0TQV5_SHEHH Length = 358 Score = 198 bits (502), Expect = 5e-49, Method: Composition-based stats. Identities = 67/385 (17%), Positives = 144/385 (37%), Gaps = 38/385 (9%) Query: 71 FVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQA 130 F ++ + GK R +G+ + + DARA L+ + ++G+D + KA + +++ Sbjct: 2 FQYRYRFEGKGRRYDLGSYPNLSLSDARACVPELKGITESGMDVKSVKASQKVGKKTV-- 59 Query: 131 ESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSA 190 K + +L + T + T+R Y T Sbjct: 60 ----LKPKLEDCMDLFLDKYVTSLRESTQRFYR-----------------------YTLN 92 Query: 191 GPLASLLNLPLSELTPDYIAAWLSTERQNR-PTVTAHAYRLLRAFIKWSNYQKKYQGIIP 249 + + P+ ++T A+ ++ P + + L+ + + + Sbjct: 93 KYIPNAFEQPVEDITRKEWYAYFDGVEESSTPHMANSLIKKLKTCLNFCKERDLI----- 147 Query: 250 GDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAV-RSLNNPIASAYLQVLLLTGARRE 308 D + + K V +++ D ++K+ RS + P +++++LTGAR Sbjct: 148 SDHSLNEIRTKSVGSASNTGDRTPSVVEIKAILEEFGRSKSYPTTVNVVRMIVLTGARCG 207 Query: 309 EIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSN 368 E+ ++ D++F + + L P + L ++ + +VF S Sbjct: 208 EVRCMQSKDINFDTGIWTVPKEKSKTNTRILRPLGLKALELVKWQVKTFGGFSDYVFPSA 267 Query: 369 SKSGKI--IEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSA 426 S +I + ++ S+H RRS TL VP I +++GHK Sbjct: 268 SYKNEIGPATINKMCRTIVKRMDIERWSVHDFRRSLSTLLTEDGVPLHITEKMLGHKLGG 327 Query: 427 LAEKHYRRRPLDLLRKWHEKIETWI 451 + + + ++ RK ++ E I Sbjct: 328 ILSVYNKSEYIEDQRKAYKVWEEMI 352 >UniRef50_A9W3V7 Integrase family protein n=1 Tax=Methylobacterium extorquens PA1 RepID=A9W3V7_METEP Length = 429 Score = 197 bits (501), Expect = 6e-49, Method: Composition-based stats. Identities = 88/435 (20%), Positives = 146/435 (33%), Gaps = 48/435 (11%) Query: 32 KFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSV-YAGKTLRMTIGNI 89 K T L FLW +D+ R SG + + AG RM++G Sbjct: 3 KLTKRILDAAGARPT--PYFLWCSDLKGFGVRIFPSGRRVYYADYRTAAGMRRRMSLGEH 60 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 +D+AR A + G DP + R+ +T + YL+ Sbjct: 61 GKLTVDEARRLAITTLGDVIRGDDPIEERVT------------RRKSLTIAELCRRYLEA 108 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 G+ R RG+ PL L + + +LT + Sbjct: 109 AGAGLVLGRGR-----------KPKKATTLVSDRGRIEHHIVPL--LGSRLVRDLTTAEV 155 Query: 210 AAWLSTERQNRPT----VTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQD-----YNVRK 260 ++ + R A L+ + G I + VR Sbjct: 156 QRFVRDVQAGRTAKRYKTKARGMVLVEGGAGAAARTAGLLGGIMSYAIGEGVIALNPVRG 215 Query: 261 MVPVSASKADDCLQKEQLKSWFSAVRSLNNPI----ASAYLQVLLLTGARREEIASLRWS 316 + + K D L E+ ++ + A + +Q+L LTG R EIA+LRW+ Sbjct: 216 VKRPADRKKDRRLSPEEYRALGRVLAEAEGDRESWQAVSSIQLLCLTGCRMREIANLRWT 275 Query: 317 DVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIE 376 +VDF +R+ + EG I PL LL + + +V + G Sbjct: 276 EVDFAGRCLRLDNTKEGRSIRPLGQAAVALLRQIEERR-----AGPYVLPATRGEGGFGG 330 Query: 377 PRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRP 436 A R A LP I H LR SF + A + + ++GH + ++ Sbjct: 331 IPDAIERYSKRAGLPGIGAHTLRHSFASTAADLGCSDSTIGAMLGHAGHGVTSRYIHHLD 390 Query: 437 LDLLRKWHEKIETWI 451 +L +++ T + Sbjct: 391 A-VLIMAADRVTTAM 404 >UniRef50_D2YQV3 Phage integrase family protein n=2 Tax=Vibrio RepID=D2YQV3_VIBMI Length = 402 Score = 197 bits (501), Expect = 6e-49, Method: Composition-based stats. Identities = 83/446 (18%), Positives = 144/446 (32%), Gaps = 60/446 (13%) Query: 26 MALSRQKFTFERLRRFTLPE---GKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKT 81 M + KF +L K+T D + L G K F+F+ G Sbjct: 7 MQSRKFKFNKRQLDSLPPTPRSSKSKETEYTDELCSGLKMIVNRQGRKRFLFRYTLHGTK 66 Query: 82 LRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSV 141 + +G I+ AR A + I G DP+ + + ++ +TF Sbjct: 67 KSIQLGEYPALDINTARQIANDHKREIALGNDPKAIR------------DEKRNVLTFQE 114 Query: 142 AWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPL 201 E + ++ + + K G + PL Sbjct: 115 FSELH-----------------------YLPYAMMNKLTAKSDAGSLKLHFYSKWGKKPL 151 Query: 202 SELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKM 261 +++ I L + R T + R L ++ ++ G + + Q K Sbjct: 152 TDIGQQDIQKLLDGLLEGRKPATVNRLRSL--VLRMFRLAMEW-GYVDSNPGQYIRKLKE 208 Query: 262 VPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWS----D 317 V L + ++ S+ A N S L+ LLTG R EI S +W D Sbjct: 209 NNV----RQRFLSRAEVSSFIKACNEEPNRTQSNALKFALLTGMRIGEITSSKWECLTVD 264 Query: 318 VDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEP 377 D WS K R + L E++N K ++F ++ I P Sbjct: 265 DDGNWSLFLPHTKSGLSRTVLLNHLAKEVIN---DQRRFQQLKNPYIFAGDAPGRPIAHP 321 Query: 378 RSAHNRALVLAEL-PHISLHGLRRSFGTLAEWVE-VPTGIVAQIMGHKPSALAEKHYRRR 435 + A R A + + +H LR SF ++ V ++GH+ + + Y Sbjct: 322 KKAFARIKKAAGITDNFRIHDLRHSFASILINSGNATLYDVQHLLGHQSPQTSTR-YAHL 380 Query: 436 PLDLLRKWHEKIETWILNEAGITIKN 461 LR+ + + G K+ Sbjct: 381 ASSRLRE----VSANVAELVGDVSKS 402 >UniRef50_Q1K3L0 Phage integrase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3L0_DESAC Length = 417 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 78/411 (18%), Positives = 145/411 (35%), Gaps = 61/411 (14%) Query: 57 VTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPR 115 V L +G++ F F+ + +T + +G + + + DA +A+ + +I G+DPR Sbjct: 38 VPNLYLSVWQNGSRKFHFKMTFLHETTFIALGALGEITLPDAVQKAQLYRQMIQEGLDPR 97 Query: 116 IAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSS 175 + + + T +Y ++ I K P +R++ Sbjct: 98 -------------RTLTERRIKTLEKFCHEYFEDF---IDQNHKHPKKSRHMLKRW---- 137 Query: 176 RGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWL---------STERQNRPTVTAH 226 L ++PL ++ ++ ++ TER+ + Sbjct: 138 ----------------ILPVFGHIPLKQIDSRLVSEFVQQILTTVSQKTERRISGSTAKQ 181 Query: 227 AYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVR 286 A LL + + Q ++ + P + L ++ + A Sbjct: 182 ALSLLSKLFQCAIDQH----LVDANPCDGV----RRPKVNRSRERYLSGDEYPRFIKATM 233 Query: 287 SLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGE-RIIPLTPYVSE 345 SL + + + +L + G R E+ L W DV + + IK GE R + L + Sbjct: 234 SLIDRPQAKAIMILAVLGLRPSEVLGLAWCDVHLIDNRIHIKQAKNGESRFVTLNSVARD 293 Query: 346 LLNVLAQSPNSDVNKEGWVFRSNSK--SGKIIEPRSAHNRALVLAELPHISLHGLRRSFG 403 LL L + + WVF S K +G + R +AELP +L+ LRRS Sbjct: 294 LLQQLYDARK---KRAVWVFPSRGKSSTGHLQSVSKTFERICNMAELPEFNLYDLRRSHA 350 Query: 404 TLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWILNE 454 T V + + + HK A Y R + + +E L Sbjct: 351 TFLLQSGVDLFTIKEALHHKTLASTM-VYARVSSESMVNANELAAQRALEA 400 >UniRef50_B2HTK9 Integrase n=4 Tax=Acinetobacter RepID=B2HTK9_ACIBC Length = 420 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 80/438 (18%), Positives = 155/438 (35%), Gaps = 60/438 (13%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIGNIN 90 K + L E K Q DA++ A R T+ +K ++ + + G+ R+TIG Sbjct: 1 MKLNKSTVDAIPLTE-KGQKIYRDAELIGFAVRVTNKSKTYIVERRHEGELYRVTIGKTT 59 Query: 91 DWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQEL 150 D +ARA+A+ + I + + L+ + +T + A + Y+ Sbjct: 60 DIPATNARAKAQMILAKISN---------NEYEKPIKLKNVANPLDITVNEALQIYID-- 108 Query: 151 RTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIA 210 R KT R Y +Y ++ N L +++ + Sbjct: 109 RNDFRPKTIRQY-HKYFDLYL-----------------------GWGNKKLFQISKQEVL 144 Query: 211 AWLSTERQNRPTVTAHAYRLLRAFIKWSN-YQKKYQGIIPGDLAQDYNVRKMVPVSASKA 269 + + A LL K+ + + I D + Sbjct: 145 DRFIEVSEVSESSANGAVSLLGTLWKYIHVLYSTDENPILKSNPVDIISVTRGWNKIASR 204 Query: 270 DDCLQKEQLKSWFSAVRSLNNPIA----------SAYLQVLLLTGARREEIASLRWSDVD 319 D L K+ + +++AV + + + + + TG R++E L+W+DVD Sbjct: 205 DRHLHKDIIHKYYNAVLHYEDELNLENTARSNTHRDIVLMCMYTGCRKQEACCLKWADVD 264 Query: 320 FKWSSMRIKDKIEG-ERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSG----KI 374 K ++ +D G + P+ ++ +L +D WVF + Sbjct: 265 IKNGTLTFRDTKNGSDHTFPIGDHLHSILRERWLLREND-----WVFPATKMPTSWNMHA 319 Query: 375 IEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGH--KPSALAEKHY 432 + + NR + ++S+H RR+F T+ + + +++ H KP Y Sbjct: 320 TKVDTLLNRVGKEVDY-YVSMHDFRRTFATICNLLRFNIYVTKRLLNHTAKPRIDVTGGY 378 Query: 433 RRRPLDLLRKWHEKIETW 450 + P + LR IE Sbjct: 379 VQIPDEELRASMNMIEAV 396 >UniRef50_A3UV17 Phage integrase n=1 Tax=Vibrio splendidus 12B01 RepID=A3UV17_VIBSP Length = 444 Score = 195 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 73/444 (16%), Positives = 160/444 (36%), Gaps = 31/444 (6%) Query: 34 TFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVY---AGKTLRMTIGNI 89 T + + T KK + L G K F ++ GK +++ +G Sbjct: 11 TNKTIEALT---AKKGVLSDSGENRGLRIACGKTGRKTFTYRYRSPESGGKLVQIKLGIF 67 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 D ++ AR + R ++ + + GI P+ + E L R +T + YL+ Sbjct: 68 PDMSLEQARIKLREMKAIRERGICPKADLERQEQERRKLLKTERVNSITLKDVIDHYLEN 127 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 + S +R + +K + +A L + + E+ I Sbjct: 128 YIQDRLTSSGGVISG----------ARKAKGQKEVRRTLYVDIVALLGDRSVMEVGKSDI 177 Query: 210 AAWLSTERQNR-PTVTAHAYRLLRAFIKWSNYQKKYQG--IIPGDLAQDYNVRKMVPVSA 266 + P R L + +++ + P LA + + V ++ Sbjct: 178 TYLIQGIIDRGAPVQAGSVLRELSSAYEYAIGMDYLPENFVNPALLAINKFKKSKVKLTN 237 Query: 267 SKADDCLQKEQLKSWFSAVRSLNNPIA-SAYLQVLLLTGARREEIASLRWSDVDFKWSSM 325 +K L +L + + + + L++ L TG R E+ L W +DF +++ Sbjct: 238 NKGKRVLDHSELSRFIKWLPNSSFSKNIRGILRMTLWTGCRTGEVCDLEWQQIDFDKNTI 297 Query: 326 RIKDKIEGE-RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRA 384 + + G R + L + L + + + +VF ++ +++ + Sbjct: 298 YLTETKNGNSRYVQLPSQAVQWLRKWKEVKS--YPQSIYVFSTSKGGSHVVQKQLTQYTW 355 Query: 385 LVLAE-----LPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDL 439 + + +P + H LRR+ T + PTG+ ++GH + + R Sbjct: 356 RMRRDGLMIDMPLWTPHDLRRTVRTELARMGCPTGVAEAVLGHSVKGIEGTYNLHRYEAE 415 Query: 440 LRKWHEKIETWILNEAGITIKNNV 463 R+W ++ + ++ + +K N+ Sbjct: 416 CREWLQRWADEL--DSIVNVKTNI 437 >UniRef50_Q2GBS0 Phage integrase n=2 Tax=Sphingomonadaceae RepID=Q2GBS0_NOVAD Length = 430 Score = 195 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 87/452 (19%), Positives = 170/452 (37%), Gaps = 41/452 (9%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTL---- 82 + K T + K +WD +++ R SG +++ + G Sbjct: 1 MPTAKLTAAIVENAR--PSIKPYTIWDTELSGFGLRVYPSGKLSWIAKYRVGGGGRNAPV 58 Query: 83 -RMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSV 141 ++G+ DARA A+R G DP ++++ ++T Sbjct: 59 RCPSLGDARKVSAKDARAAAKRELAAAQLGGDPMAV------------IKAQRCEMTVEA 106 Query: 142 AWEDYLQE----LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLL 197 Y +E R +P + +Y + KKR +S + Sbjct: 107 LISLYEKEGCFVQRGIRIGVPMKPLTKKYTLSRLRNHVVPLLGKKRISEVSSQDIESLGR 166 Query: 198 NLPLSELTPDYIAAWLSTER-QNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDY 256 + + + + D + + R L A ++ + G++ + Sbjct: 167 AITIGKTSKDEKVGVRNRVIVKGGEGAARKVIRDLSAVFSFAMRR----GLVKANPVTLA 222 Query: 257 NVRKMVPVSASKADDCLQKEQLKSWFSAVRSLN----NPIASAYLQVLLLTGARREEIAS 312 +VRK + + L ++LK A+ L NP A ++ LTG RR+EIA Sbjct: 223 SVRK----TDNVRVRHLSMDELKRLGEALDELEKAGVNPKAVNIARLWALTGCRRDEIAG 278 Query: 313 LRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSG 372 L+WS+VDF+ + ++D G + PL + LL L + +D +VF + G Sbjct: 279 LQWSEVDFETGRLVLQDTKTGRSVRPLGGAAAILLAKLREGATADAV---FVFPAERGEG 335 Query: 373 KIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHY 432 + +A++ A+LP ++ H LR + G+L +V ++GH + + Y Sbjct: 336 FFQGTKRVWAQAILKAKLPGVTPHILRHTVGSLGASAGEGMLLVGAVLGHSNARSTLQ-Y 394 Query: 433 RRRPLDLLRKWHEKIETWILNEAGITIKNNVD 464 D R +++ T + + G+ + + + Sbjct: 395 MHVASDPARLAADRLTTPVADALGLPMPVSQE 426 >UniRef50_C5RZC7 Phage integrase family protein n=1 Tax=Actinobacillus minor NM305 RepID=C5RZC7_9PAST Length = 420 Score = 195 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 72/426 (16%), Positives = 148/426 (34%), Gaps = 35/426 (8%) Query: 26 MALSRQKFTFERLRRFT--LPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTL 82 + KFT + ++ L + + D + L C SG+K F+F+ + K Sbjct: 10 PKIKPFKFTAQSIKALPQNLSTTSTELEVSDTESKGLKCLVGRSGSKRFLFRYTFKNKKC 69 Query: 83 RMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVA 142 + +G D + + R R+ + L+ G++P+ A + + + F Sbjct: 70 SIALGKFPDISVSEVRNIVRQYRELLCCGVNPKEQLQSNNATGDMNSQSESERVLAFQPM 129 Query: 143 -WEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPL 201 + + + + KR + + + G+ + L L + Sbjct: 130 TVSAFFWSVYLPYAKQRKRSWDKDESRFRLYIEPYIGKV-----------IYSDLKALQI 178 Query: 202 SELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKM 261 ++ D I+ R P LL+ ++ + ++++ ++ Sbjct: 179 YQIQSDMISGNHYP-RAFSPATCNRTIALLKTMGNFAYRLE--------YISENVALKVP 229 Query: 262 VPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFK 321 + ++ E++K+ N A + + +LLLTGARR E+ +W +D Sbjct: 230 LLKENNQRSRYFSLEEMKALLYHAEFYPNKYAGSLIALLLLTGARRNELQQAKWEYLDVN 289 Query: 322 WSSMRIKDKIEGE-RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSA 380 + + + G+ R I L+ LN L + ++F I PR A Sbjct: 290 AQILYVPNTKNGKPREIYLSDEAMYWLNRLERD-----VGNPYIFARKGSVKPISAPRFA 344 Query: 381 HNRALVLAELPH---ISLHGLRRSFGTLAEWVE-VPTGIVAQIMGHKPSALAEKHYRRRP 436 + L A + I H R S TL V + H +++ Y + Sbjct: 345 LKQLLKKAGITDIDGICFHTARHSVATLLISSGKFNLYDVKAQLAHASIQSSQR-YAKLT 403 Query: 437 LDLLRK 442 + R+ Sbjct: 404 ENRQRE 409 >UniRef50_Q89GJ7 Blr6348 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89GJ7_BRAJA Length = 452 Score = 195 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 91/447 (20%), Positives = 158/447 (35%), Gaps = 56/447 (12%) Query: 30 RQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGK-----TLRM 84 R + + + + PE D ++ + F Q + ++R+ Sbjct: 5 RIALSDKAIAQLPTPE-DGWYLARDTELKGFFVVVGKRKRTFTVQGDLRQRGKRASSIRV 63 Query: 85 TIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWE 144 +IG+ + ARA A+ I G P+ K + E+ S KT T AWE Sbjct: 64 SIGDATELTTRAARAIAKEYLAQISKGQHPKARLDGKPGQTET-DGNSAKTGATLKHAWE 122 Query: 145 DYLQEL--RTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLS 202 YL+ R G S KT Y DH+ A L+ PL Sbjct: 123 RYLEAHLIRKGRSEKTISGYR-----DHVERL------------------FAEWLDTPLL 159 Query: 203 EL--TPDYIAAWLSTE-RQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVR 259 +L P +A ++N P + + R LRA + + L +D Sbjct: 160 DLATDPASVAEKHDQLTKENGPYIANGSMRTLRAIYNHARKTNR-------SLPRDNPAD 212 Query: 260 KMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVD 319 + + + + LK WF + SL+NPI + LL G+R + + ++ Sbjct: 213 AVDWNQEERRNTGMGAGDLKGWFLELASLDNPIRREFHLFTLLCGSRPTALQQAKPEHIN 272 Query: 320 FKWSSMRIKDKIEGERI---IPLTPYVSELLNVLAQ--SPNSDVNKEGWVFRSNSKSGKI 374 F+ ++ I G + IPL+ + L + + + W+F + S +G + Sbjct: 273 FRRRTLHIPKPKGGSKRAFDIPLSREMVLSLTRVLRFGRQMHPSQAQQWLFPAESATGHL 332 Query: 375 IEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRR 434 E + LR++F T+A V +M H + + R Sbjct: 333 SETKEDRAILSKWGN-------DLRQTFRTIATAAGVSEFDAKLLMNHSIPGVNAGYVTR 385 Query: 435 RPL--DLLRKWHEKIETWILNEAGITI 459 L D LR + I T + + G ++ Sbjct: 386 HKLVEDHLRSQQQAISTVVFSALGNSL 412 >UniRef50_A6X585 Phage integrase family protein n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X585_OCHA4 Length = 444 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 84/464 (18%), Positives = 170/464 (36%), Gaps = 54/464 (11%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGA-KAFVFQS-VYAGKTLRMT 85 + + + T + ++ + EG ++ L+D L R +G K F F +GK + Sbjct: 1 MPKLELTDKTIKAAKVSEGTRKLDLFDTLARGLCIRVGAGGVKTFYFVYSDASGKRVWNK 60 Query: 86 IGNIND----WKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSV 141 +G + + + AR +A+ L+ + G DP K S + +T Sbjct: 61 LGEYGEHTGQFTLAAARKQAKELRGYVAGGNDPAAEKR------------SERAALTVFD 108 Query: 142 AWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPL 201 E+YL R S ++ + R + S G T++ + + N+ L Sbjct: 109 MVENYLT--RAVASRRSVDEIARRLRKNVSGKDSEGNPLVDDKGKSTASEGV--IGNVKL 164 Query: 202 SELTPDYIAAWLSTERQNRPTV-TAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRK 260 S+L + + + V + +RA ++W+ + GDL ++ Sbjct: 165 SDLHRRDLTKCIDALKDRGAHVEANRLFEDIRAMVRWARGR--------GDLDENLTENM 216 Query: 261 MVPVSASKADDCLQKEQLKSWFSAV-RSLNNPIASAYLQVLLLTGARREEIASLRWSDVD 319 P + + L ++++K + A+ + +++ L+TG R E++ + ++ Sbjct: 217 RKPTETAPRERWLTEDEIKIVWKALPDADMRESTRRIIRLCLITGQRVGEVSGMTREELS 276 Query: 320 FKWSSMRIKD---KIEGERIIPLTPYVSELL-------NVLAQSPNSDVNKEGWVFRSNS 369 + I K + + +PL+ +++ LA DV E +F S Sbjct: 277 DDATLWTIPGERAKNKQQHKVPLSSLAMQIILEQQADVEALAARKGRDVPDE--IFPSPG 334 Query: 370 KSGKI--IEPRSAHNRALVLA---ELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKP 424 G A R V +P + H LRR+ T E + V ++ + H Sbjct: 335 FHGPAGADSIPKALKRLDVNGNVLGVPAWTPHDLRRTCATHMEMLGVSPHVIGHCLNHIS 394 Query: 425 ---SALAEKHYRRRPLDLLRKWHEKIETWILNEAGITIKNNVDM 465 + + Y R D ++ E + W IT + + Sbjct: 395 TTKATVTTAVYAR--YDYAKEKAEALSLWSDRLTAITSGSGAKV 436 >UniRef50_B6QXT6 Phage integrase n=2 Tax=Pseudovibrio sp. JE062 RepID=B6QXT6_9RHOB Length = 416 Score = 194 bits (492), Expect = 7e-48, Method: Composition-based stats. Identities = 82/461 (17%), Positives = 157/461 (34%), Gaps = 86/461 (18%) Query: 32 KFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSV-YAGKTLRMTIGNI 89 T + K+ FLWD+ + + SGAK F+ Q + G++ RM++G Sbjct: 3 NITKRTVD--AASPATKKHFLWDSKLKGFGLQVMPSGAKTFIVQYRTHEGRSRRMSLGRY 60 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 + D AR A + + G DP + + K A T +V + Y+ Sbjct: 61 GELTPDQARDLATNVLATVRNGDDPLLKRENKRAA------------PTVNVLLDIYM-- 106 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 + H+ + ++ K + + L + L+ + I Sbjct: 107 ------------------SKHVQVHNKPKTMKDIERLLKRCVR-SRLGLMKLNSVRRQDI 147 Query: 210 AAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKA 269 A + R P +L + VR + ++ Sbjct: 148 AKLHHSLRAT-PRQANQVLAVLSKAFNLAEVWGLR-------PEHSNPVRLVKRYKENER 199 Query: 270 DDCLQKEQLKSWFSAVRSLNNPIASAYLQV-----------------------------L 300 D L +E+L+ + + ++ L Sbjct: 200 DRFLSEEELQRLGRTLELADQEGLPWIIKAGKRSAKHLPKDVAKRKTPVNPRALCCLRLL 259 Query: 301 LLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERII-PLTPYVSELLNVLAQSPNSDVN 359 L TGAR EIA+L+W +DF+ ++ + + ER P++ E+L+ + V+ Sbjct: 260 LYTGARLSEIATLKWKHIDFELATFALPSRKGDERKPHPVSSSAIEILSEFPR-----VD 314 Query: 360 KEGWVFRSNSKSGKIIEPR---SAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIV 416 +V + I +A R + A +P + +H LR + GT A ++ Sbjct: 315 GSPYVLPGCKDPTQPISIEVIENAWQRIRIHANIPDVRIHDLRHTVGTFAAQAGSNAFLI 374 Query: 417 AQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWILNEAGI 457 + ++ H+ + ++ +R E I I EAG+ Sbjct: 375 SHLLRHRNVTITNRYVNHDAH-PIRVLSEAIGERI--EAGL 412 >UniRef50_C3MAV8 DNA integration/recombination/invertion protein n=1 Tax=Rhizobium sp. NGR234 RepID=C3MAV8_RHISN Length = 429 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 83/453 (18%), Positives = 149/453 (32%), Gaps = 68/453 (15%) Query: 33 FTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNIND 91 T + + +++ + D + L T+G K++ + +AGK +MT+G Sbjct: 7 LTVKSIEAIKAGSSRRE--IPDGALQGLYLIVQTTGVKSWAVRYRHAGKPRKMTLGGFPA 64 Query: 92 WKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELR 151 + DAR EAR+ ++ G DP K AE + L E Sbjct: 65 ISLSDAREEARKALRMVSEGRDPATEK-----------AEQEPKRPAHMDLMPALLDEFV 113 Query: 152 TGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAA 211 T A RP R + + + + +T + Sbjct: 114 TRHVAVKNRPSYVRESKRIVEKNLK-----------------PKWKQKLVKTVTKRDVLK 156 Query: 212 WLSTERQNR-PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKAD 270 L P + LL F W+ + V P D Sbjct: 157 LLDEIVDRGSPIMANRVRALLSKFFAWAMERDIVDA--------SPVVSIKAPSEEKTRD 208 Query: 271 DCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFK-----WSSM 325 L E+++ + A L P +++LLLT RR E++ W +++ + W Sbjct: 209 RILTDEEIRFLWLAAEKLAYPF-GPVVKLLLLTAQRRTEVSDALWDELELEGNNQLWVIS 267 Query: 326 RIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEG--WVFRSNSKSG-------KIIE 376 + K + E +PLT E++ L + ++ K ++F + K+ K Sbjct: 268 VDRAKNKKEHFVPLTASALEIIEGLPKIKPAEDEKAKPIYLFTTTGKTPVSGFSKAKTQL 327 Query: 377 PRSAHNRALVLAE----------LPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSA 426 A AE + + H LRR+ + + VP IV ++ H+ + Sbjct: 328 DGEMLAIARKEAEERGEDPEGISIEPWTYHDLRRTAASGMARLSVPVHIVEAVLNHRSGS 387 Query: 427 ---LAEKHYRRRPLDLLRKWHEKIETWILNEAG 456 +A + R + R +L G Sbjct: 388 IKGVAAVYNRYDYAEEKRAALTAWADEVLRLVG 420 >UniRef50_Q6LTT6 Hypothetical integrase n=1 Tax=Photobacterium profundum RepID=Q6LTT6_PHOPR Length = 446 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 98/450 (21%), Positives = 171/450 (38%), Gaps = 57/450 (12%) Query: 33 FTFERLRRFTLPEGKKQTFLW----DADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIG 87 T ++ K W D L + SG+K+F F+ K + + IG Sbjct: 2 LTTTHIKSLK--PRKSAYSEWENTRDRKSGRLGVKVQPSGSKSFYFRYYKDLKPVFILIG 59 Query: 88 NINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAES------LQAESRKTKVTFSV 141 + DAR +A+ + G DP+I + E Q E+ K + + Sbjct: 60 KFPAVSLSDAREKAKIYGAMWSDGKDPKIELQAERERIEQETVKLKAQQEAEKRQGSVGQ 119 Query: 142 AWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPL 201 + Y+ EL + KR + AD + S+ ++K Sbjct: 120 LLDSYINELVLREKSSFKR-VGKAFEADVYGVISKDTKAK-------------------- 158 Query: 202 SELTPDYIAAWLSTERQNRPTVTAHAYR-LLRAFIKWSNYQKKYQGIIPGDLAQD----- 255 ++TP I+ LS + V ++ R L A + P +L Q+ Sbjct: 159 -DITPQDISIVLSKIIKRGAEVQSNKVRSYLHAAFNFGLRHDY----DPKNLGQEVFFNL 213 Query: 256 -YNVRKMVPV---SASKADDCLQKEQLKSWFSA--VRSLNNPIASAYLQVLLLTGARREE 309 +N VP + + D+ L+ ++++ +A + L L G R + Sbjct: 214 SFNPVSSVPKQLNAENVGDNWLKMDEVRYLVNADCSEYFSEEHLLLLKLCLYLGGQRPFD 273 Query: 310 IASLRWSDVDFKWSSMRIKD---KIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFR 366 +A+ WS VDF + + K + +IPLT +LL +L + + +E ++F Sbjct: 274 LANSYWSAVDFAERTFEMSMRASKTDKPNLIPLTETAIKLLKLLRKIHPPKIGQECFLFP 333 Query: 367 SNSKSGKIIEPR--SAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKP 424 + ++SG + R A R + + LRR+F TLA +EV I +I H Sbjct: 334 AKTESGHLDTNRFGKAVKRFCDDTKFKKFTPRDLRRTFKTLAGALEVSKDIRDRIQNHAL 393 Query: 425 SALAEKHYRR-RPLDLLRKWHEKIETWILN 453 + ++ KHY R + R+ E ET I Sbjct: 394 NDVSSKHYDRYEYIKEKREALELWETSINE 423 >UniRef50_B6JJF3 Phage integrase family protein n=2 Tax=Bradyrhizobiaceae RepID=B6JJF3_OLICO Length = 414 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 77/431 (17%), Positives = 142/431 (32%), Gaps = 60/431 (13%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAG---KTLR 83 + + K T + P WD + T G K FV AG + + Sbjct: 14 MPQVKLTKSAIDALPTPS--HDLVYWDLGCPGFGVKVTPKGRKVFVVMYRTAGSGSRLRK 71 Query: 84 MTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAW 143 TIG ++ AR A+++ G D KA Sbjct: 72 YTIGPYGRVTLNQARVAAQKVFAAKLEGRDLAAEKAAS---------------------- 109 Query: 144 EDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSE 203 R I A +IA H++ + E + + A + + E Sbjct: 110 -------RRRIVADRVEDLLEAFIAQHVSQNRSAREISRMLRREVG----AVWGSRSIHE 158 Query: 204 LTPDYIAAWLSTERQNR-PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMV 262 ++ + A +++ Q P + ++ F +W + L + + Sbjct: 159 ISKRDVIAIVNSIEQRGAPIAANKMLKTIKTFFRWCVGRAL--------LDRSPADGVPL 210 Query: 263 PVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKW 322 P D L ++L A R L P +++L LTG RREE+A W +++ Sbjct: 211 PAKQVARDRVLSDDELVRVILAARQLGGP-YGNIVEMLALTGQRREEVARCTWDEINLTT 269 Query: 323 SSMRI---KDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRS 379 + R+ + K I L+ +L +VF S + + Sbjct: 270 RTWRLPSERTKNGKAHEIYLSDQAVAVLAR-------ATTGTKFVF-SKTGAFAFQGFGP 321 Query: 380 AHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDL 439 A + L+++ LH LRR+ + + V + +I+ H+ ++ + D Sbjct: 322 AKDEIDKLSDVTGWRLHDLRRTCVSGMARLGVAPHVADKILNHQTGTISGVAAVYQRHDF 381 Query: 440 LRKWHEKIETW 450 L + +E W Sbjct: 382 LAERKAALELW 392 >UniRef50_Q0TL05 Phage integrase n=6 Tax=Escherichia coli RepID=Q0TL05_ECOL5 Length = 439 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 94/456 (20%), Positives = 176/456 (38%), Gaps = 69/456 (15%) Query: 38 LRRFTLPEGKKQTFLWDADVTTLA----CRATSGAKAFVFQSVYAGKTLRMTIGNINDWK 93 L T+ + +K+ R S K+++++ A K ++T+G+ Sbjct: 11 LASLTVTKEEKEILFAVKSKAGGGLFIRVRYGSDNKSWIYRYRIAQKPAKLTLGSYPAMG 70 Query: 94 IDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTG 153 + AR L+ GIDPR + + + + + +S W+D+++ Sbjct: 71 LAQARKAHADAIELVRKGIDPRHIRKN--------EKQKNEQMIIYSELWKDWIEFR--- 119 Query: 154 ISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWL 213 KT +P STR +AD+ R E +L NL + ELT I L Sbjct: 120 ---KTSKPISTRTLADYEGTYHRHLEK--------------ALGNLRIDELTKSVIFEHL 162 Query: 214 STERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCL 273 S R+ +L + +N Q G++ + A+ + L Sbjct: 163 SNVRKTSSEAVRKGLIILNMTLDHANLQ----GMLEHNPARLLKPAMFGASMNKPRERWL 218 Query: 274 QKEQLKSWFSAVRS-------------------LNNPIASAYLQVLLLTGARREEIASLR 314 + +L+ + A+ + + + L++++ TG RR E A +R Sbjct: 219 PENELRMLWKALDDATVGGGSIASGGYGISSSVVLSHSVANALRLIIFTGVRRSEAAQMR 278 Query: 315 WSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKI 374 W ++ + ++ K I+ L PY+ L+ + + +VF S SK Sbjct: 279 WDQINGERWTIP-ATKNGKSHIVTLHPYMLSLIKT-----QREFTEGAYVFGSTSKPDFP 332 Query: 375 IEPRSAHN-----RALVLAELPHISLHGLRRSFGT-LAEWVEVPTGIVAQIMGHKPSALA 428 I + R+ LAEL S H LRRS T AE+++ P ++ ++ H P Sbjct: 333 ITNDALTRALERVRSKYLAELTPFSPHDLRRSVATGCAEYLDAPERLIELLLNHVPKDRL 392 Query: 429 EKHYRR-RPLDLLRKWHEKIETWILNEAGITIKNNV 463 + Y+ + + L+ + +I+N IT++ N Sbjct: 393 IRTYQVGQQAEKLKNLFIEWGNFIMNNV-ITVQQNA 427 >UniRef50_B5J4F2 Site-specific recombinase, phage integrase family protein n=19 Tax=Octadecabacter antarcticus RepID=B5J4F2_9RHOB Length = 372 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 85/409 (20%), Positives = 136/409 (33%), Gaps = 74/409 (18%) Query: 42 TLPEGKKQTF-LWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAE 100 LP K T WDA++ L +K + FQ G+T R+ IG AR Sbjct: 21 KLPHAKAGTDKYWDAEIKGLVLFVGKRSKTWYFQKDVGGQTKRILIGRFPIISAQAARQT 80 Query: 101 ARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKR 160 A + G ++ T A E YL + Sbjct: 81 ALGFALEMGRG----------------AGKAAQIGAPTLEAAMEGYLARPKLR------- 117 Query: 161 PYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNR 220 E+ K G + L + LPL E++ + Sbjct: 118 -----------------SETNKIGMRAQLSLHLKDWMRLPLDEISKGMMVRRHQAMS-GS 159 Query: 221 PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKS 280 P+ H R RA + DLA+ + + + E L+ Sbjct: 160 PSAANHVLRSFRAIYNHARRT--------CDLAECPTMA-IEWFEDKPDGRII--ENLRH 208 Query: 281 WFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERI-IPL 339 W + L NPI + ++LL TG R+ E+ +L+W + + + G +P+ Sbjct: 209 WRKTIDDLPNPIHRVFYELLLFTGLRKTEVFTLKWDQIHEDR--IHLPMTKNGRSFDLPI 266 Query: 340 TPYVSELLNVLAQSPNSDVNKEGWVFRSN-SKSGKIIEPRSAHNRALVLAELPHISLHGL 398 E+L L WVF S S++G I P + H Sbjct: 267 LQLHHEILAPLRPLSR------DWVFPSPKSETGHITRPERL-----------KYNPHMH 309 Query: 399 RRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKI 447 RR+F T+A V IV +++ H P ++ + Y + LD LR + + Sbjct: 310 RRTFATVAMEAGVLEEIVGRLLNHTPLSITGQRYVKPSLDALRPSMQSV 358 >UniRef50_A5CFJ0 Phage-related integrase n=19 Tax=Orientia tsutsugamushi RepID=A5CFJ0_ORITB Length = 442 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 78/450 (17%), Positives = 148/450 (32%), Gaps = 56/450 (12%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTF-LWDADVTTLACRAT-SGAKAFVFQSVYAGKTLR 83 M ++ KFT L + +P ++ TF D L + +G + G + Sbjct: 4 MPVTVFKFTQAALNKMQVPTKEENTFQCRDEKERNLVFIISYTGFRRLYLGININGMYYK 63 Query: 84 MTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAV--KIAEAESLQAESRKTKVTFSV 141 + IG+ D + +AR + ++L+ I GI+P + K + + K ++TF Sbjct: 64 IKIGDFPDLTVAEARKKIQQLKRDIAKGINPMDERRKINKERREKREKRLKLKNELTFRQ 123 Query: 142 AWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPL 201 E Y + + H + S + + + L N + Sbjct: 124 VHEKYTE------------------YSSHHHRSWKRTSERVKIYAAF-------LYNKKI 158 Query: 202 SELTPDYIAAWLSTERQNRPT-VTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRK 260 SE+T + I + + L + G+I + K Sbjct: 159 SEITKEDIQKIFDEITARKHYVTANNILMNLSPIFNKAIEW----GLIDKNPVHGIKRHK 214 Query: 261 MVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASA-----------YLQVLLLTGARREE 309 + E+++ + N + +L + L T AR Sbjct: 215 -----QESRSRYVTNEEMERLMKVLVEKENSQLTEEQKQSKISETLFLFIALFTAARSGN 269 Query: 310 IASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNS 369 I ++RW ++ I +L+ VL +K W+ S Sbjct: 270 ILAMRWDEISLSEKIWCIPKTKSKNGKQLYIGLADKLIAVLQNRKLC--SKSEWILPSVK 327 Query: 370 KSGKII---EPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSA 426 + K I A + A +P++++H LRR+F T ++QI+GH + Sbjct: 328 DNSKHISSSTIHRAWAKIRKKAGIPNVTIHDLRRTFATWMINNGETVDTISQILGHSNTN 387 Query: 427 LAEKHYRRRPLDLLRKWHEKIETWILNEAG 456 K Y L + + K+ +L G Sbjct: 388 TT-KIYIIHSLAMAKIATNKVVENMLRIFG 416 >UniRef50_A5G0X2 Phage integrase family protein n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5G0X2_ACICJ Length = 410 Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 93/439 (21%), Positives = 167/439 (38%), Gaps = 49/439 (11%) Query: 32 KFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAGKTLRMTIGNIN 90 K +RL + ++ L D L R + G+K++ F+ AG+ M++G + Sbjct: 3 KTVSKRLNALAITNANREGNLHDGG--GLYLRVRADGSKSWAFRYTMAGRKHWMSLGPLR 60 Query: 91 DWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQEL 150 D + +AR +AR+L+ L+ G DP + + A + +T TF Y++ Sbjct: 61 DVSLSEAREQARQLRNLVRDGFDPLAQRRERQHLA------AEQTARTFDAVAAAYVEAH 114 Query: 151 RTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIA 210 R S +A + + + P+SE++ + Sbjct: 115 RAEWSNPKHAQQWENTLATYAS---------------------PIIGKRPVSEISLLDVR 153 Query: 211 AWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGII----PGDLAQDYNVRKMVPVSA 266 L +P + + A + ++ G PG L Q Y + V A Sbjct: 154 RVLDPIWAEKPETASRLRGRVEAVLAYATVHGWRSGDNPARWPGFLDQIYAPK--AKVRA 211 Query: 267 SKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFK---WS 323 K L + ++ + +R +++ L+ +LT R E RW ++DF W Sbjct: 212 VKHHAALDYHDMPAFMAELREREA-VSARCLEFAILTATRSGEARGARWDEIDFDAAVWV 270 Query: 324 SMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNR 383 + K++ E +PL P ELL +A ++G +F + + + A Sbjct: 271 IPAPRMKMKKEHRVPLAPRAVELLREMA---GRSPRRDGLIFPGGAPGKPMTDVALAKAV 327 Query: 384 ALVLAELPHISLHGLRRSFGTLAEW-VEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRK 442 A++ P + HG+R SF A P I + H E Y+R DLL K Sbjct: 328 AVLR---PGFTAHGMRSSFRDWAAEMTSFPREIAEVALAHINKDRTEAAYQRG--DLLAK 382 Query: 443 WHEKIETWILNEAGITIKN 461 + +E W AG+ ++ Sbjct: 383 RRQLMEAWANYCAGLVEES 401 >UniRef50_D2LD60 Integrase family protein n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LD60_RHOVA Length = 427 Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats. Identities = 72/428 (16%), Positives = 144/428 (33%), Gaps = 54/428 (12%) Query: 33 FTFERLRRFTLPEGKKQTFLWDADVTTLA-CRATSGAKAFVFQSVYAGKTLRMTIGNIND 91 T L G + + D + L SGAK++ + G+T ++T+G Sbjct: 5 LTVRALENMR--PGASRREIPDGIIQGLYFVHQPSGAKSWAVRYRVGGQTRKLTLGTYPA 62 Query: 92 WKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELR 151 + AR A + G D K +A + ++ + +++ Sbjct: 63 IGLKPARDLASTALAAVARGED-----PAKAKKAAKEKEKAAPARDFVEAVAASFIERHS 117 Query: 152 TGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAA 211 + +T + R + I + L ++T + Sbjct: 118 KQKNKETHIRETERILQREI---------------------VPVWKGRKLGDITRADVHE 156 Query: 212 WLSTERQNR-PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKAD 270 L PT+ +R W+ + +A P S D Sbjct: 157 VLDAIVNRGCPTMANRTLSTVRKMCAWAVDRS--------FIAVSPCHGIKAPASEKSRD 208 Query: 271 DCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI--- 327 L ++++++ + A + P ++LL T RR+E+A +RWS++DFK I Sbjct: 209 RLLSEDEMRAAWLAFEATGWPFGPLA-KLLLATAQRRDEVADMRWSEIDFKTRIWTIPAA 267 Query: 328 KDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKS--GKIIEPRSAHNRAL 385 + K +PL+ +L+ L +VF + K+ + A + + Sbjct: 268 RSKNGQAHEVPLSEAALAILDGLP----HVAGVSDYVFTTTGKTPVSGFSRAKKAFDEQI 323 Query: 386 VL---AELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPS---ALAEKHYRRRPLDL 439 +P +LH LRR+ + ++ P +V ++ HK ++ + R Sbjct: 324 TRQLGEGIPGWTLHDLRRTAASGMTALKSPPHVVDAVLNHKSGTIKGVSAVYMRYGYAAE 383 Query: 440 LRKWHEKI 447 R + Sbjct: 384 KRTALDAW 391 >UniRef50_A5VCT1 Phage integrase family protein n=3 Tax=Alphaproteobacteria RepID=A5VCT1_SPHWW Length = 422 Score = 191 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 83/438 (18%), Positives = 147/438 (33%), Gaps = 38/438 (8%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSV-YAGKTLRMT 85 + K T + +P KKQT LWD ++ R SG K F+ Q G R+ Sbjct: 1 MPTSKLTKRAVDAL-VPPSKKQTVLWDTELKGFGVRVLPSGLKTFIVQYRNAEGIKRRIN 59 Query: 86 IGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWED 145 I +D AR +A+ + G DP + + + +T + Sbjct: 60 IARYGVLTVDQARDQAKLKLAAVIGGEDP------------ADEVRQARKGMTVEEMCDW 107 Query: 146 YLQELRTG-ISAKTKRPYSTRYIADHINLSSRGGES--KKRGQGPTSAGPLASLLNLPLS 202 YL E R G I + P + + + KR + + + Sbjct: 108 YLTEARAGNILGRKNLPIKKSSLDMDESRIKTHIKPLLGKRIVKHLTIADVEQMQTDVKD 167 Query: 203 ELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMV 262 T + V A L+A I + ++ L + + Sbjct: 168 GKTAKPRSGGRGGMATGGAGVAARCVGTLQAIIGHAKHKG---------LLDAHPTQGAK 218 Query: 263 PVSASKADDCLQKEQL----KSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDV 318 ++ K L ++ K+ A R+ NP+A L+ LLLTG RREE ++ + V Sbjct: 219 KLAGKKKTRRLNVAEIVLMGKAMAYAERNGENPVALGVLRTLLLTGYRREEGQAMHRAWV 278 Query: 319 DFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPR 378 + + D G +I + P + + + F S G Sbjct: 279 NGAGGYVAFPDTKGGAQIRAIGPAAVKAVE-----SQPVIVGNPHAFPSEVGRGPFTAVS 333 Query: 379 SAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLD 438 + R LA + I+ H LR +FG++A + + ++GH + + + + Sbjct: 334 ACLQRVAKLAGIEGITPHTLRHTFGSVAGDLGFSELTIRAMLGHASQNVTQDYIHID--E 391 Query: 439 LLRKWHEKIETWILNEAG 456 L+ + I Sbjct: 392 ALKLAVRRTSDEIERLLA 409 >UniRef50_C4SWJ3 Phage integrase n=7 Tax=Gammaproteobacteria RepID=C4SWJ3_YERIN Length = 430 Score = 191 bits (485), Expect = 5e-47, Method: Composition-based stats. Identities = 71/406 (17%), Positives = 150/406 (36%), Gaps = 31/406 (7%) Query: 61 ACRAT---SGAKAFVFQSV--YAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPR 115 R T SG K F ++ K ++ IG+ + AR + + L+ + G P Sbjct: 33 GLRVTCGASGIKTFFYRYTSPVTNKLSQVKIGSFPQTSLAMARMKLQELKLIRSEGRCPA 92 Query: 116 IAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSS 175 + + + +T E YL E + + I + Sbjct: 93 SELKDEKQRLLEESQKPKAAVLTVEGLVELYLTERIEDRKSNDGK----------IIPGA 142 Query: 176 RGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRP-TVTAHAYRLLRAF 234 R + +K + +A L +E+T I ++ + + R L + Sbjct: 143 RKKKGQKEVRRTLENDAVAKLGARVAAEITRKDIVELVNGVIERGAKVQAGNLLRELSSA 202 Query: 235 IKWSNYQKKYQGI--IPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVR-SLNNP 291 +++ ++ P LA+ + + ++ + L +++L + + S P Sbjct: 203 YEFAIGLGRFDDNFANPALLAKSSLRQTNIKLTCERGTRILSEKELAKFLHWLPGSAYTP 262 Query: 292 IASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEG-ERIIPLTPYVSELLNVL 350 L++ L TG R E+ ++ W DVD ++ +++ G ER + L+ + L +L Sbjct: 263 TIKNVLRLTLWTGCRTGEVCNMAWEDVDLNKGTIHLRETKTGVERYVQLSDQAIDFLKIL 322 Query: 351 AQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVL-----AELPHISLHGLRRSFGTL 405 +N + ++F S + I + N + ++PH + H LRR+ T Sbjct: 323 R------LNSDKYLFPSQATKKPIQQKYLTENSWRLRESGQMLDIPHWTPHDLRRTVRTG 376 Query: 406 AEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWI 451 ++ P + ++GH + + + RKW + +I Sbjct: 377 LSRLQCPNEVAEAVLGHTRGGVEGIYNLYKYDAECRKWLQLWADYI 422 >UniRef50_A9W5J9 Integrase family protein n=2 Tax=Alphaproteobacteria RepID=A9W5J9_METEP Length = 415 Score = 190 bits (483), Expect = 8e-47, Method: Composition-based stats. Identities = 85/445 (19%), Positives = 156/445 (35%), Gaps = 60/445 (13%) Query: 24 RKMALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQS-VYAGKTL 82 R +A + + T + L G+ + WDA++ R +V + G++ Sbjct: 10 RAVAENLVRLTRSATTKLALVPGQAERVWWDAELPGFGYRLRGERATWVVRPPRGGGRSS 69 Query: 83 RMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVA 142 +T+G DAR AR G D R A+ V+ AE K +T A Sbjct: 70 LITLGAAGLIDATDARRLAREHLLKAALGEDTRSARRVERAER-------TKAALTVKEA 122 Query: 143 WEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLS 202 ++ Y T + + RP + + H++ RG L LPL+ Sbjct: 123 FDLY-----TAAAEERLRPSTLANLRTHLSQHWRG------------------LHALPLA 159 Query: 203 ELTPDYIAAWLSTERQ-----NRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYN 257 + +A L + + P A R L W+ + + + Sbjct: 160 SVRRADVAEQLRKIARPAPDGSGPQAALRARRTLSTVYVWAIGEDLAET--------NPV 211 Query: 258 VRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSD 317 P + + L ++L + + A + S +++L LTGARR+E+A L+W + Sbjct: 212 TGTNPPAVEVRRERVLTDDELSAMWRACPPTGD--YSRIIRLLALTGARRDEVAELQWGE 269 Query: 318 VDFKWSSMRI---KDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKI 374 +D + R+ + K ++ L+ ++L + ++ +VF S G Sbjct: 270 IDTAAAVWRLPAARSKNGRPHVMHLSGPALDILAATPR-----IDGRPYVF--GSGRGPF 322 Query: 375 IEPRSAHNRALVLAEL-PHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKP---SALAEK 430 + R +H LRR+ T + P +V + + H L Sbjct: 323 SGFSKSKARLDRQLGFGEPWVVHDLRRTVATGMARLGTPIEVVEKALNHVSGTFGGLVGI 382 Query: 431 HYRRRPLDLLRKWHEKIETWILNEA 455 + R R + +L A Sbjct: 383 YQRFDYAAERRIALDAWAAHVLKLA 407 >UniRef50_A3V8A4 Possible phage-related integrase n=2 Tax=Rhodobacteraceae RepID=A3V8A4_9RHOB Length = 386 Score = 190 bits (483), Expect = 8e-47, Method: Composition-based stats. Identities = 76/431 (17%), Positives = 143/431 (33%), Gaps = 64/431 (14%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRM 84 LS + T +R ++ ++DA R TSGA ++V + G+ R+ Sbjct: 2 PKLSTVRLTDTFIRSLR--PKDQRYDVFDASQPGFGVRVATSGALSWVLLTRENGRRKRI 59 Query: 85 TIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWE 144 T+G + AR AR + I G R + TF A E Sbjct: 60 TLGGYPAISLSKAREAARLALSEIQEGTFGR-----------------KNAPATFETAVE 102 Query: 145 DYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSEL 204 ++ + K+ + A +++ L L L ++ Sbjct: 103 EWYAR-----EQRAKKSFRQVEQAMRLHV-------------------LPFLGRHQLDQI 138 Query: 205 TPDYIAAWLSTERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVP 263 + + + T + F ++ + L P Sbjct: 139 KKADLMRVIDRVAERGKLTQANRVRAFITRFFNFAIERDL--------LMSSPAAALPRP 190 Query: 264 VSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWS 323 D L +++L + + + P Q+L+LT RR+E+A +RWS++D + Sbjct: 191 AVEISRDRVLSRDELCAVWETAEQMGFPFGR-ITQLLILTAQRRDEVAGMRWSELDLDRA 249 Query: 324 SMRI---KDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSA 380 I + K I+ L+P LL+ + + N +F + +S + A Sbjct: 250 RWIISKERAKNGKAHIVHLSPQALALLSTIPRQ-----NGVDLIFTTTGRS-AVSGFSKA 303 Query: 381 HNRALVLAELPHISLHGLRRSFGT-LAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDL 439 + + H LRRS T +AE + + +V +I+ H + + Sbjct: 304 KAALDARSHVSDWRFHDLRRSAATFMAEELRITPVVVDRILNHVSGTVRGVTAVYLRGEH 363 Query: 440 LRKWHEKIETW 450 L + W Sbjct: 364 LADREAALAAW 374 >UniRef50_Q7MKK6 Integrase n=6 Tax=Proteobacteria RepID=Q7MKK6_VIBVY Length = 402 Score = 190 bits (483), Expect = 9e-47, Method: Composition-based stats. Identities = 78/447 (17%), Positives = 145/447 (32%), Gaps = 78/447 (17%) Query: 30 RQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAGKTLRMTIGN 88 +QK T ++ T+ + + L D +++ R + G + GK +G+ Sbjct: 4 KQKITASSIKNLTIADKR----LNDTEISGFHARISPKGVIKYYLYYRIHGKQRNFLLGS 59 Query: 89 INDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQ 148 N AR A+ + G D + + + ++ +T S E++ Sbjct: 60 ANALTPAQARDLAKEKAGQVAAGEDVQDTRH-------EAKKREQRNSLTLSKFLEEHYS 112 Query: 149 ELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDY 208 I+AKT + L PL E+T Sbjct: 113 AYLMSINAKT-----------------------AQKSLMCIQSNFKHLSTKPLVEITAWD 149 Query: 209 IAAWLSTERQ--NRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSA 266 I W++ + P ++AY LRA + G I + + P Sbjct: 150 IQQWVAERSKAGRAPATISYAYNRLRAVFN----RAVEWGFIDSHSLDNVKI----PRID 201 Query: 267 SKADDCLQKEQLKSWFSAVRSLNNPIASAYLQ-----------------------VLLLT 303 +K L + + ++++ + + LQ + L T Sbjct: 202 NKRIRYLSVSEEAALLESLKARDARLKDEALQRYGKRAQRLVSQRYVDFLEPLIVLALNT 261 Query: 304 GARREEIASLRWSDVDFKWSSMRIKD---KIEGERIIPLTPYVSELLNVLAQSPNSDVNK 360 G R+ EI SL+WS ++ + + I+ K + +R IPL V +L + Sbjct: 262 GMRKGEILSLKWSHINMEDRYLTIRSENAKSKNKRTIPLNNTVYTMLQAWHE----QNPD 317 Query: 361 EGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIM 420 VF N K + + L A + + H LR F + E +V +++ Sbjct: 318 TELVFERNGK--PLDSYQYQWESLLKEAGIENFRFHDLRHHFASKLVMKEADLNVVRELL 375 Query: 421 GHKPSALAEKHYRRRPLDLLRKWHEKI 447 GH + + Y + I Sbjct: 376 GHADLKMTLR-YAHLAPEHKASAVNLI 401 >UniRef50_UPI0000383FB1 COG0582: Integrase n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000383FB1 Length = 450 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 91/461 (19%), Positives = 167/461 (36%), Gaps = 65/461 (14%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTI 86 + + K T L R P Q DA + RA SGAK F K R+T+ Sbjct: 1 MPKMKLTVAALDRMA-PPAAGQVDYNDATTSGFGVRANYSGAKTFFALLRIGSKLTRITL 59 Query: 87 GNINDWK---------IDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRK--T 135 G +++AR +A+ + G DPRI A + A +Q R Sbjct: 60 GWYPADAVDEKMRRDALEEARTKAKDAMAIASVGKDPRIVWAEREAANAQMQEAQRAVNA 119 Query: 136 KVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLAS 195 K+ F +D++ + + + Y + +A+ Sbjct: 120 KLLFPAVVKDFMAKHVGQAKGGLRDSTARAY------------------KAALQGTDVAA 161 Query: 196 LLNLPLSELTPDYIAAWLSTERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQ 254 + ++E++ + L A R F +W + Q Sbjct: 162 WTDKMVTEISKRDVLDVLDAITARGALAKAASQRRYFSKFFRWCAERDLIQ--------V 213 Query: 255 DYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLR 314 + P +A D L E+L+ ++A ++ +P +++L+LTG R +E+A Sbjct: 214 PPTLTVPKPQAAVTKDRVLSVEELRDVWAAADAVGHPF-GPMVKLLILTGQREKEVAEAV 272 Query: 315 WSDV-DFK-----WSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSN 368 WS+ D W+ + K + +IPL + +L L + + W+ + Sbjct: 273 WSEFADLDGEGPLWTLPGERTKNRRDNLIPLAKTATTILGGLPK-----YRRCPWILTTT 327 Query: 369 --------SKSGKIIEPRSAHNRAL-VLAELPHISLHGLRRSFGTLA-EWVEVPTGIVAQ 418 SK+ K I+ A RA +P + H +RR+F T+A + ++ IV Sbjct: 328 TKAPISGFSKAKKRIDTAIAARRAKDERKPMPGWTFHDIRRTFVTMAGDELDADPHIVEA 387 Query: 419 IMGH---KPSALAEKHYRRRPLDLLRKWHEKIETWILNEAG 456 + H + +A + R + L +K + ++ G Sbjct: 388 AVNHISGTKAGVAGVYNRAKYLPQKKKLFADWDAFVAKVVG 428 >UniRef50_C8QZM9 Integrase family protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QZM9_9DELT Length = 409 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 72/444 (16%), Positives = 154/444 (34%), Gaps = 61/444 (13%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNI 89 KF+ ++R P+ KK + + + R SGAK ++F + GK M +G+ Sbjct: 1 MKFSEAKIRNLR-PQSKK---YYLREANGFSVRIMPSGAKTWLFIYTFDGKRKEMNLGHY 56 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 ++ AR + R L + G DP + E R+ S ++Y+ + Sbjct: 57 PAVTLEAARRKYRAAFDLFEQGNDP--------VAMHLEKKEERRRTPFLSDLVDEYINK 108 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 + + KR ++ + Q + + + +++ + Sbjct: 109 H----AMRFKRSWA-------------------KDQAILNRDVVPAWGQRKAVDISKRDV 145 Query: 210 AAWLSTERQNR-PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 L P + + ++++R ++ ++ + +P Sbjct: 146 ILLLEKIVDRGSPGMANNCFQIIRKMFNFAVDREILE--------ISPCTGVKMPAPKMA 197 Query: 269 ADDCLQKEQLKSWFSAVRSLNNPI-ASAYLQVLLLTGARREEIASLRWSDVDFKWSSM-R 326 D L +E+++ +S + ++++L+T R E+ + +S+++ +W ++ Sbjct: 198 RDRVLSEEEIRVLWSGLERAKISHEVQRAIKLILVTAQRPGEVMGMDFSEIEGRWWTIPA 257 Query: 327 IKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRS-----AH 381 + K + LT EL+ N G+VF S S AH Sbjct: 258 DRAKNGKAHRVYLTDTALELIGE---------NTGGFVFPSPRHRENPRPIGSNAMTVAH 308 Query: 382 NRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLR 441 R L + H LRR+ T + ++ I+ H + + + R + Sbjct: 309 RRNKDKIPLEDFTPHDLRRTAATFMAEMGTMDEVIDAILNHSKMGVIRVYNQYRYDTEKQ 368 Query: 442 KWHEKIETWILNEAGITIKNNVDM 465 E E + G K D+ Sbjct: 369 ATLEAWERRLQRILGAEKKEQGDI 392 >UniRef50_C6E138 Integrase family protein n=1 Tax=Geobacter sp. M21 RepID=C6E138_GEOSM Length = 433 Score = 188 bits (477), Expect = 4e-46, Method: Composition-based stats. Identities = 76/457 (16%), Positives = 152/457 (33%), Gaps = 70/457 (15%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRM 84 M+ +R FT +R+ + ++ R SG K++++ GK M Sbjct: 1 MSRARIVFTDTMIRKLKPDTNE----YRKSEGNGFTIRVMPSGFKSWLYLYAINGKRRCM 56 Query: 85 TIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWE 144 +G+ D ++ AR + ++ G+DP AK + E + +T ++ Sbjct: 57 GLGHYPDVTLETARDRFEAAKKMVKNGMDPLDAK--------EEEQEQHRKALTVKQLFD 108 Query: 145 DYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSEL 204 DYL +R K + + +N+ + Sbjct: 109 DYL--VRHAKLNKRESSWREDERLFKVNVE-------------------PEWGKRKAEHI 147 Query: 205 TPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPV 264 L RP + + +L R ++ + + VPV Sbjct: 148 KKRDCIELLDKYAD-RPALCHNVMKLTRKLFNFAVEKDILEH--------TPFTGVKVPV 198 Query: 265 SASKADDCLQKEQLKSWF--SAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKW 322 + L ++K + ++ + +++LLLTG R E+ + ++VD W Sbjct: 199 ELESRERILTDTEIKKLWRTELPKAAISDEVKQIIKLLLLTGQRVGEVCGITVNEVDGNW 258 Query: 323 SSMRIKDKIEGE-RIIPLTPYVSELL------------------NVLAQSPNSDVNKEGW 363 ++ + G+ + LT +LL + + D N + Sbjct: 259 WTIPQERSKNGQTHRVYLTDTAIKLLGKSINGYYFPSPVVKNDSDGKPVFKHIDENAVAY 318 Query: 364 VFRSNSKSGKIIEPRSAHNRAL------VLAELPHISLHGLRRSFGTLAEWVEVPTGIVA 417 R N K + P ++ + H + H LRR+F T + I+ Sbjct: 319 AIRKNLKDYQPRRPIKGDRISMVQVPEEKKMSIAHFTPHDLRRTFSTSLAKLGFNDEIID 378 Query: 418 QIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWILNE 454 +MGHK + + + R + R+ E +L+ Sbjct: 379 AVMGHKKQGVIKIYNRHKYDTEKRQALVAWEKRLLSL 415 >UniRef50_Q483M1 Site-specific recombinase, phage integrase family n=3 Tax=Gammaproteobacteria RepID=Q483M1_COLP3 Length = 390 Score = 188 bits (477), Expect = 4e-46, Method: Composition-based stats. Identities = 74/422 (17%), Positives = 149/422 (35%), Gaps = 51/422 (12%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAK-AFVFQSVYAGKTLRMTIGNI 89 + +LR+ P + AD L+ R + A F ++ + GK R+ +G Sbjct: 1 MALSDTKLRKIKAPYNGEAEL---ADRDGLSVRVSPKALITFNYRFRWEGKQQRIKLGRY 57 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 K+ DAR + + +D G+DPR+ ++ F E ++ + Sbjct: 58 PGLKLIDARKKVNEYRHNLDEGLDPRVV------------QNESRSHNLFGDMCEAFMTK 105 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 + ++ + + D+I Sbjct: 106 YVMTELRPKTQTLYKSTFNKYVTPYKNIDIERYKYT---------------------DWI 144 Query: 210 AAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKA 269 A + ++++ + +A W+ K +G I D + K + K Sbjct: 145 AYFDWVKKESSSANAGSVLKRFKAVANWA----KARGQIKHSHLIDIPI-KAIGSHQQKR 199 Query: 270 DDCLQKEQLKSWFSAVRSLN-NPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI- 327 + CL+ +++ + + S P +Q+LLLTGAR EI R + D + + Sbjct: 200 ERCLEWDEVIGLWRQIESSKSTPQCKTCIQLLLLTGARNAEIREARRDEFDLDKNIWLLP 259 Query: 328 --KDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIE--PRSAHNR 383 + K + + PL+ V EL+N L D ++ + K + R Sbjct: 260 PERSKTKKQVRRPLSTGVIELINKLDLIYGQDR---EYLIAGDIKGKPLTTHAVNRFVQR 316 Query: 384 ALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKW 443 + PH H RR+ T +V + +++GH+ + ++ + +D R+ Sbjct: 317 MNNHLKYPHFVPHDFRRTIVTRLSEHKVELHVTEKMLGHELGGILTRYNKHDWIDEQREA 376 Query: 444 HE 445 +E Sbjct: 377 YE 378 >UniRef50_A1TXN0 Phage integrase family protein n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TXN0_MARAV Length = 396 Score = 188 bits (476), Expect = 6e-46, Method: Composition-based stats. Identities = 89/417 (21%), Positives = 157/417 (37%), Gaps = 55/417 (13%) Query: 59 TLACRAT-SGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIA 117 LA R + G K + ++ + GK +++G + +AR L+ GI+P+ A Sbjct: 8 GLAIRISIRGTKTWFYRFRFRGKQDAVSLGRYPTTSLLEARDVHGDACALLAKGINPKKA 67 Query: 118 KAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRG 177 AE T ++D+++ + S +TKR S + + + R Sbjct: 68 FKESKKVAEQTW--------TGQELFDDWIRVYSSTPSTRTKRTPSEQVVR---QTTWRW 116 Query: 178 GESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQ-NRPTVTAHAYRLLRAFIK 236 + +R +L + + +T A+ +S + N +L Sbjct: 117 NKYLRR-----------TLGQILIPTITKQVAASLISAVSELNSREQARKCLTILNGMFG 165 Query: 237 WSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPI-ASA 295 + +G+I + K+ S L ++K ++ A+ + A Sbjct: 166 LAVA----KGLIDENPCYGLQPSKLGASKGSPRSRVLTPSEMKRFWEALEDSSLDTSVRA 221 Query: 296 YLQVLLLTGARREEIASLRWSDVDFKWSSMRIK---DKIEGERIIPLTPYVSELLNVLAQ 352 L+ +LLTG RR EI +WSD+DF + + K + +P++ + LL L Sbjct: 222 ALKAILLTGLRRGEICQAKWSDIDFNTNVWNLPPEITKSRRKHTVPISTALKNLLQSLDM 281 Query: 353 SPNSDVNKEGWVFRSNSKSGKIIEPRSA--------------HNRALVLAELPHISLHGL 398 +VFRS + I S N L L S+H L Sbjct: 282 -------DGTYVFRSTRAPWQPIGSNSLTTAIARLQGIKTQQVNEKAPLFGLERFSVHDL 334 Query: 399 RRSFGT-LAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPL-DLLRKWHEKIETWILN 453 RR+ T L E+ E P ++ +I+ H E Y+R L D K E+ TW++ Sbjct: 335 RRTVATGLGEYCETPPHVIRRILNHLSDDRLEDIYQRATLFDEQAKALERWSTWVME 391 >UniRef50_A1ATP4 Phage integrase family protein n=2 Tax=Desulfuromonadales RepID=A1ATP4_PELPD Length = 449 Score = 188 bits (476), Expect = 6e-46, Method: Composition-based stats. Identities = 73/463 (15%), Positives = 158/463 (34%), Gaps = 81/463 (17%) Query: 27 ALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMT 85 A+ + FT +R+ E ++ R SG+K +++ + GK +M Sbjct: 8 AMKKTTFTDTMIRKLKPTESD----YTRSEGNGFTIRVMPSGSKTWLYLYAFDGKRRKMN 63 Query: 86 IGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWED 145 +G+ D ++ AR + + IDP QAE R+ T + D Sbjct: 64 LGSYPDVTLETARGRFEDAKRKVKNNIDP--------MAEAEEQAEERRKAPTVADLVHD 115 Query: 146 YLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 Y++ + + KR ++ + + + + + +++T Sbjct: 116 YIERH----AKRFKRSWA-------------------KDEQILNREVVPAWGKRKAADVT 152 Query: 206 PDYIAAWLSTE-RQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPV 264 I L +N P + + ++++R W+ Q Q +P Sbjct: 153 KRDILRLLEEIVNRNAPAMANNTFQIIRKMFNWAVEQDILQH--------TPCTGVKLPS 204 Query: 265 SASKADDCLQKEQLKSWFSAV---RSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFK 321 D L + ++K+ + + + + L+++L T R E+ L S++D Sbjct: 205 PKLSRDRVLSESEIKTLWENLGRPDAGMSDGVRRALRLILTTAQRPGEVTGLHTSELDGC 264 Query: 322 WSSM-RIKDKIEGERIIPLTPYVSELL-NVLAQSPNS-----DVNKEGWVFRSNSKS--- 371 W ++ + K + L+ E++ +AQ+ S D G+VF + KS Sbjct: 265 WWTIPAERAKNGKTHRVYLSGLALEIINQAIAQAKKSRETPYDQEYNGYVFPCHHKSKEK 324 Query: 372 -----------------------GKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEW 408 G + + + H + H LRR+ T Sbjct: 325 PMGDTALAVAVGRALASPLTDDKGNPLFTAAGKPATENRLGIDHFTPHDLRRTTATFMAS 384 Query: 409 VEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWI 451 + ++ ++ H + + + + R ++ E E + Sbjct: 385 MGFMDEVIDAVLNHAKQGVIKVYNQYRYDVEKQQALETWENKL 427 >UniRef50_B5J7V0 Site-specific recombinase, phage integrase family protein n=2 Tax=Octadecabacter antarcticus RepID=B5J7V0_9RHOB Length = 448 Score = 188 bits (476), Expect = 6e-46, Method: Composition-based stats. Identities = 89/448 (19%), Positives = 157/448 (35%), Gaps = 79/448 (17%) Query: 15 CKTAILNWSRKMALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVF 73 C+ +W ++ + K T L +TF+WD + + G ++V Sbjct: 10 CRLKATSWLPAVSAMQTKITQRTLANID--GTGTRTFIWDTALVGFGIEVSAKGRASYVC 67 Query: 74 QSVYAG--KTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAE 131 ++ G + R IG+++ +DDAR++AR + GIDPR K E Sbjct: 68 EARIKGTGRKFRQKIGSVDLIPLDDARSDARSMLLQAFKGIDPRFEKQ-----------E 116 Query: 132 SRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAG 191 + T A DY+ R +++ T R Y T + Sbjct: 117 VEQGPKTVGQAVTDYIDAKRHKLASSTVRDYRV-----------------------TFSS 153 Query: 192 PLASLLNLPLSELTPDYIAAWLST-ERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPG 250 L+ +LPL +L +A S Q+ T R LRA + Y G+ P Sbjct: 154 CLSDWEHLPLGQLNGQMVATRYSKLLGQHSVAYTNKVMRNLRAALN-------YHGLEPN 206 Query: 251 DLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEI 310 + RK + + + L ++ + + +PI+ + +LTG R+ E Sbjct: 207 P--VKFLTRKDLMAVDAPRNRFLSAHEIYIIYGYFSTFQHPISR-VVLFCILTGVRKNEA 263 Query: 311 ASLRWSDVDFKWSSMRIKD--KIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSN 368 L W++V + + D K +P + +L + + + F Sbjct: 264 LKLTWANV-TSQTILFAGDIQKNHKPHHVPRVGLLDSILGDRGEPLDLVFGYTQYSF--- 319 Query: 369 SKSGKIIEPRSAHNRALVLAEL---PHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPS 425 R +R EL + ++H LRR+F + V+ + Sbjct: 320 ---------RKPFDRFKQRPELVGWAYWTMHDLRRTFSEHMNLIGYGASDVSLASNRSDN 370 Query: 426 ALAEKHY-----------RRRPLDLLRK 442 ++ KHY RR DL R+ Sbjct: 371 SVTVKHYLGGQLAKENLLRRMYTDLQRQ 398 >UniRef50_Q5P4X3 Phage-related integrase n=2 Tax=Betaproteobacteria RepID=Q5P4X3_AZOSE Length = 453 Score = 187 bits (475), Expect = 6e-46, Method: Composition-based stats. Identities = 102/449 (22%), Positives = 167/449 (37%), Gaps = 40/449 (8%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIG 87 + R++ T +R+RRF P+G KQ FLWD LA RAT+GAK+++F++ +T+R TIG Sbjct: 1 MQRERLTPDRIRRFNCPDGTKQAFLWDTVAPRLAVRATAGAKSYIFEAKLNRQTIRRTIG 60 Query: 88 NINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYL 147 ++ W +DDARAEA RLQ L+++G DPR + + +A K T Sbjct: 61 DVRAWNLDDARAEANRLQVLVESGTDPRELDRQEAEAKAAAKAAQEAAKRTADE------ 114 Query: 148 QELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPD 207 S T R Y + R ++ P E+T Sbjct: 115 ------RSRYTLRALCDAYTGHLERTGKDKSAAATRSAFKCHVFTHETIAAAPAREVTSH 168 Query: 208 YIAAWLSTERQNRPTVTAHAYR-LLRAFIKWSNYQKKYQGIIPGDL----AQDYNVRKMV 262 IAA + R+ A R L A + + + +P DL + V + Sbjct: 169 QIAAMVRKVREAGKERAAGILRSYLSAAFN-AAKRAPFDSAMPADLIAFGIEHNPVDNIP 227 Query: 263 PVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKW 322 ++ + L ++L+++ A+ A LL G R ++ + SD D Sbjct: 228 AIAVQAGNRTLSADELRAYIKALGDELP--DQALRLALLAGGQRMAQLLRAKVSDYDADT 285 Query: 323 SSMRIKDKIEGERIIPLTPYV------------------SELLNVLAQSPNSDVNKEGWV 364 +++R+ D + E A W+ Sbjct: 286 ATLRLWDGKGKRQSAREHLLPLAPKAAALAAGLVARAKKREQKRAEAAGEAPGDVGGMWL 345 Query: 365 FRSNSKSGKI-IEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHK 423 F ++ K I P V + L +RR+ T+ + + AQ++ H Sbjct: 346 FSTHGKVAMIFTTPGKRAAEISVGMKCEPFDLRDIRRTCETMLAGMGISRDTRAQLLSHG 405 Query: 424 PSALAEKHY-RRRPLDLLRKWHEKIETWI 451 S + HY R D R E + Sbjct: 406 ISGVQAAHYDRHSYTDEKRAALVAWEARL 434 >UniRef50_Q1NCW5 Phage integrase n=2 Tax=Sphingomonadaceae RepID=Q1NCW5_9SPHN Length = 433 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 89/445 (20%), Positives = 150/445 (33%), Gaps = 46/445 (10%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSV-YAGKTLR 83 M + K T + LP +KQT LWD ++ R SG K F+ Q G R Sbjct: 1 MTMPTAKVTKRAVDALELP-AEKQTILWDTEIKGFGVRVLPSGLKTFIIQYRNIEGIKRR 59 Query: 84 MTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAW 143 + +G I+ AR +A+ + G DP + + + + + Sbjct: 60 LNLGRYGVLTIEQARNQAKIKLGAVARGEDP------------AKEVYEARRDMNVAEMC 107 Query: 144 EDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSE 203 YL E R G R + K + T PL L + Sbjct: 108 NWYLVEARAG-----------RILGRKNLPIKASSLDKDESRIKTHIKPL--LGKRIVRH 154 Query: 204 LTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNY-------QKKYQGIIPGDLAQDY 256 LTP I S ++ + R RA S Q L + Sbjct: 155 LTPSDIEQMQSDVKEGKTAKPRGPGRGGRATGGPSAASGCVGTIQAIIGHAKHKGLLAKH 214 Query: 257 NVRKMVPVSASKADDCLQKEQL----KSWFSAVRSLNNPIASAYLQVLLLTGARREEIAS 312 ++ K L ++ K+ A R+ NP+A L+ LLLTG RREE + Sbjct: 215 PTEGAKKLAGRKKTRRLSVIEIEMMGKAMAYAERNGENPVALGALRALLLTGYRREEGQA 274 Query: 313 LRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSG 372 ++ + V + D G +I + P ++ + + F S SG Sbjct: 275 MQRAWVSTAGGYVAFPDTKGGAQIRAIGPAAVRVIESQPEIVGNPHT-----FPSELGSG 329 Query: 373 KIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHY 432 + R LA + ++ H LR +FG++A + + ++GH + + + Sbjct: 330 AFTAVSACLQRVCKLARIEGVTPHTLRHTFGSVAGDLGFSELTIRAMLGHASQNVTQDYI 389 Query: 433 RRRPLDLLRKWHEKIETWILNEAGI 457 + L+ + I + Sbjct: 390 HID--EALKLAVRRTSDEIERLLAL 412 >UniRef50_A3VLD9 Phage integrase n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VLD9_9RHOB Length = 360 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 75/423 (17%), Positives = 130/423 (30%), Gaps = 74/423 (17%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMT 85 MA +++K T + +WD ++ K +Q KT+R Sbjct: 1 MAATKKKLTQTVADK-----AGPNEKIWDTEIKGFYLVTGKTKKTLYYQKDVNRKTVRHK 55 Query: 86 IGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWED 145 +G++ + + AR EA +L+ TG Q + T A + Sbjct: 56 LGSLPEITVAAARVEAEQLRAEHATG--------------AVAQRLAASRIPTLRDATDT 101 Query: 146 YLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 YL + E K L L+L L E+T Sbjct: 102 YLARPKLR------------------------SEHNKNQVRAQMENKLTDWLDLRLDEIT 137 Query: 206 PDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVS 265 A + + H + R+ + + Sbjct: 138 KADCVAMHARLGADGERAANHVLKSFRSIYNHARRVHDLPEC---------PTMAIEWFP 188 Query: 266 ASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSM 325 + + + L +W AV L N + A+ + LLLTG R E SLRW V + Sbjct: 189 EPASGKII--DDLDAWKEAVDGLENDVHRAFYRFLLLTGLRLSEALSLRWDQVHADH--L 244 Query: 326 RIKDKIEGERI-IPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRA 384 + G +PL +L + +VF + + P Sbjct: 245 HLPLTKNGRPFDLPLLAEHHGILQPMQAYR------SDYVFPGTRHALHLKSPERIA--- 295 Query: 385 LVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWH 444 S H RR+F T+A + + +++ H P ++ HY + + LR Sbjct: 296 --------WSAHAHRRTFATVAAESGLWEETIGRLLNHTPQSVTGAHYVKVGHEQLRAPM 347 Query: 445 EKI 447 E++ Sbjct: 348 EQV 350 >UniRef50_A3X1G8 Probable integrase protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X1G8_9BRAD Length = 424 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 78/456 (17%), Positives = 150/456 (32%), Gaps = 83/456 (18%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKT----L 82 ++ Q+ T + G+ +WD +T R +GAK++V Sbjct: 1 MTAQRITKRSVEALQTSGGE--FTVWDDALTGFGVRVRPTGAKSYVVVYRAGSGRGAPVR 58 Query: 83 RMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVA 142 R TI + + ARA A+ + + G DP K + + T + Sbjct: 59 RYTIAAVGKITPERARARAKVILAAVAHGHDPANQK------------TAERGVPTVAEL 106 Query: 143 WEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLS 202 + ++ + + + + ++ Sbjct: 107 ADRFVTDHVRAKRKAGTAEFYRDILDRIVK---------------------PAVGTTKAD 145 Query: 203 ELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMV 262 +LT + S+ P ++ + ++ GI+P ++ R + Sbjct: 146 KLTRLQVGRLHSSLADT-PFQANRVLAVVGSMYAFAGRA----GIVPEGIS---PARGID 197 Query: 263 PVSASKADDCLQKEQLKSWFSAVRSLNN---------------------------PIASA 295 S+ + L E+L+ SA+R P A+A Sbjct: 198 KFKESRRERFLTSEELERLGSAIREAETTGIPWSVDETKPTAKHMPKAKRSTRIAPSAAA 257 Query: 296 YLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPN 355 L++LL TG R EI LRW VDF+ + + D G + I L +L+ + + Sbjct: 258 ALRLLLFTGCRLREILHLRWEHVDFERGCLFLPDSKSGRKTIILNAPALAVLSTMDRL-- 315 Query: 356 SDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGI 415 +V ++ + + + + L + LH LR ++ + + I Sbjct: 316 -----GPYVVPGDNPERPRRDLKRPWDGVTKRSGLTGVRLHDLRHTYASFGAGGGLGLPI 370 Query: 416 VAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWI 451 + +++GH SA + Y D LR E I I Sbjct: 371 IGRLLGHAQSATTAR-YTHLDNDPLRCASEAIAGRI 405 >UniRef50_A5F3U5 Site-specific recombinase, phage integrase family n=5 Tax=Vibrio RepID=A5F3U5_VIBC3 Length = 411 Score = 186 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 82/440 (18%), Positives = 163/440 (37%), Gaps = 63/440 (14%) Query: 33 FTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTIGNIND 91 L+ FTL +G L R + G + F+ G + R+ +G+ D Sbjct: 13 LNKSHLKVFTLTDGD-----------GLGARVSLQGNVRWQFRYKINGASKRVDLGDYPD 61 Query: 92 WKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELR 151 + AR EA++ + + G DP++ ++V E V+ A E +L E Sbjct: 62 LSLLKAREEAQKCREWLAEGHDPKLQRSVIRQETL--------KPVSVQDALEYWLVEYA 113 Query: 152 TGISAKT--KRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 A R ++I +I D + Sbjct: 114 ESNRANADKHRSQFQKHIYPYIGALPLAQTETHHWIECF------------------DRV 155 Query: 210 AAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKA 269 ++ +++ P + + + +++ ++ + DL + V K Sbjct: 156 RKGIAGKQRPAPVAAGYVLQNAKQALRFCRVRRYATSRVLDDLTVND-----VGKKQRKK 210 Query: 270 DDCLQKEQLKSWFSAVRSLNN--PIASAYLQVLLLTGARREEIASLRWSDVDFK---WSS 324 D L ++L ++AV++ N P ++ L++ GAR +E+ +W + DF+ W+ Sbjct: 211 DRVLTAQELSDLWNAVQTPNKFLPYYCHLVKFLVVFGARTQEVRLSKWKEWDFEALIWTV 270 Query: 325 MRIKDKIEGERIIPLTPYVSELLNVLAQSPNSD--VNKEGWVFRSNSKSGKIIEPRSAHN 382 + K + + I P+ + L L + + + + E + S+ G+ R H Sbjct: 271 PKEHSKTDEKIIRPIPDELVPWLLQLKEDSDKETLILGEEKSPETVSQQGRFFWQRLGHE 330 Query: 383 RALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRK 442 A +LH +RR+ T + V +V Q++GH + + R + L R Sbjct: 331 EA--------WTLHDIRRTLATRLNELGVAPYVVEQLLGHSLGGVMAIYNRSQYLPEKR- 381 Query: 443 WHEKIETWILNEAGITIKNN 462 E + W+ + +T K N Sbjct: 382 --EALTMWLEHLDIMTNKTN 399 >UniRef50_A6FVR7 Phage integrase n=3 Tax=Roseobacter sp. AzwK-3b RepID=A6FVR7_9RHOB Length = 390 Score = 186 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 65/427 (15%), Positives = 136/427 (31%), Gaps = 50/427 (11%) Query: 30 RQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIGNI 89 + + T +++ + L D V + F +S GK + +G Sbjct: 2 KARLTDHVIKQHQKQLTNGRATLTDTAVKGFFVEIRRRSATFNLRSSIDGKMRVIKLGCF 61 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 + +DAR + + I G A + + +T +ED+ Sbjct: 62 PELSAEDARQLCLKHKREISVG-------------ASADELAKSTKSITLDQFYEDHYLP 108 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 KT R S + + + + L ++ + Sbjct: 109 WY-----KTYRRASANIVQMY------------------RSNFHLRFGHRQLHSISQTDL 145 Query: 210 AAWLSTERQ--NRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSAS 267 + +Q P +LR ++ ++ + I L + N+ Sbjct: 146 KQLTNEMKQLGYAPGSVNTTVVVLRGMLRRADDWGLCR--IHHSLHKPPNLL----PDTK 199 Query: 268 KADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI 327 + + L +++ + +R + + LL TGAR+ E+ + W ++ RI Sbjct: 200 RHERFLSRDEAQKLQVVLRKRGATPVNLAILFLLYTGARKSEVLNAEWRSINMDRCEWRI 259 Query: 328 KDKIEGE-RIIPLTPYVSELLNVLAQSPNSDVNKEG----WVFRSNSKSGKIIEPRSAHN 382 G+ R + L+ +L K+ VF + Sbjct: 260 PLSKNGQPRTVILSQKAVAILQSARSYQQRHYGKQAKQVSAVFANPQTLLPYHNIWETWK 319 Query: 383 RALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRK 442 R + A+LP + LH LR S+ + V V +++GH A ++ Y + L + Sbjct: 320 RVRIEADLPDLRLHDLRHSYASTLINAGVSIYEVQKLLGHSHIATTQR-YAHLASERLHE 378 Query: 443 WHEKIET 449 + ++ Sbjct: 379 TVKLLDE 385 >UniRef50_D0CWC5 Phage integrase family protein n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CWC5_9RHOB Length = 417 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 88/443 (19%), Positives = 154/443 (34%), Gaps = 62/443 (13%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTI 86 ++R T + + PE ++ D + L SGAK++ + +AG+ ++T+ Sbjct: 1 MAR-ALTTKSVEAVK-PEQNRREIP-DPALAGLYLVVQPSGAKSWALRYRFAGRPKKLTL 57 Query: 87 GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDY 146 G + DARA A ++ G DP AK A Q R T Sbjct: 58 GKWPIMGVADARAAASEAIEALEHGNDPSAAKKKAKAARIEAQLSERDKVKTLLE----- 112 Query: 147 LQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTP 206 +Y H++ G E K+R + L + + E+T Sbjct: 113 ------------------QYAKRHLSKLRSGSEVKRRLETEF----LPRYGDHDIHEVTK 150 Query: 207 DYIAAWLSTERQNRPTVTAHAYRL-LRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVS 265 I L + TA+ RL L F W + IP Q Sbjct: 151 RDILELLEKIADSGRITTANRMRLYLSGFFNWCLERDA----IPISPVQGVKPV----AK 202 Query: 266 ASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSM 325 D L ++++ ++ A P A Q LLLTG R E+ + ++ + Sbjct: 203 EKSRDRVLNDDEIRWFWKACERAGYPWRQAG-QTLLLTGQRLNEVLGMTDDELHGDAWHL 261 Query: 326 RIKDKIEG-ERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRA 384 + G E ++PL+ ++L+ + + + +F + ++ I A NR Sbjct: 262 SAQRTKNGREHLVPLSQAARDVLSSVERIE----SPSRLLFTTTGRT-PICGHFKARNRL 316 Query: 385 LV------------LAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKP---SALAE 429 E+PH + H LRR+ T + +P + ++ H + Sbjct: 317 SRFMAEIAEAETGEAIEIPHWTFHDLRRTAATGMARLGIPVRVTEAVLNHVSGTGGGIVA 376 Query: 430 KHYRRRPLDLLRKWHEKIETWIL 452 + R D RK E ++L Sbjct: 377 VYQRHDFADEKRKALEAWARFVL 399 >UniRef50_B3E8B2 Integrase family protein n=1 Tax=Geobacter lovleyi SZ RepID=B3E8B2_GEOLS Length = 421 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 75/462 (16%), Positives = 144/462 (31%), Gaps = 96/462 (20%) Query: 30 RQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-----------TSGAKAFVFQSVY- 77 ++ E LR + +K + D + + GAK ++ + Sbjct: 2 KENIGVELLRSNKVNSKEKTFEINDTKLKGFTLKIYPDTVSKKGEIIPGAKTYLVRYRLP 61 Query: 78 AGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKV 137 GK R+ IG + AR +A ++ I GI+P++ K Sbjct: 62 GGKQSRIIIGRHTLYTPAQARDKAEKILRNIKDGINPKVEKQ----------------HP 105 Query: 138 TFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLL 197 S ++ +L++ + + ++ + + L Sbjct: 106 KVSHTFKSFLEDEYSPWAEAQRKD--------------------GKATVKRLKSRFSDFL 145 Query: 198 NLPLSELTPDYIAAWLSTERQ--NRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQD 255 LPL+E+TP + W + + RP ++AF+ + +++ + LA+ Sbjct: 146 ELPLTEITPLIVDKWRTGRLKDSKRPATCNRDLTAIKAFLSKAV---EWEHLEHHPLAK- 201 Query: 256 YNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNN------------------------- 290 K + V + L ++ K A+ Sbjct: 202 ---VKPLKVDSVAKVRFLSADEEKRLLKALDDREEVARAERATANLWRKERGYPLYTDLN 258 Query: 291 -----PIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI---KDKIEGERIIPLTPY 342 + V L TG R E+ASL W VD K + + + K K R +PL Sbjct: 259 SVSFADHLKPMILVSLNTGIRWGELASLAWDSVDMKKALVTVIGDKAKSGKTRHVPLNSI 318 Query: 343 VSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSF 402 L + + DV VF + + L A++ + H +R F Sbjct: 319 ALNALKDWKKQSSGDV-----VFPGRDGKKTLDNVNKSWKAVLDAAQIKNFRWHDMRHHF 373 Query: 403 GTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWH 444 + V V +++GH + + Y + Sbjct: 374 ASWLVMAGVDLNTVRELLGHSDLKMTLR-YAHLAPEHKAAAV 414 >UniRef50_Q3J1E6 Possible phage-related integrase n=2 Tax=Rhodobacter sphaeroides RepID=Q3J1E6_RHOS4 Length = 413 Score = 185 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 75/444 (16%), Positives = 149/444 (33%), Gaps = 63/444 (14%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAGKTLRMTIGNI 89 K + + + P K+Q D+ L G K + + + G RM++G Sbjct: 1 MKLSAAGVEKIK-PTDKRQEIP-DSLCVGLYLIVQPTGKKGWQVRYRHGGVHRRMSLGAF 58 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 + AR AR+ G DP VK A+A L + K K + +L + Sbjct: 59 PVLSLAGARERARQTLAAASAGTDPAAE--VKAAKAPKLDGDRDKIKTLIGQFDKRHLSK 116 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 L++G + R + H+ +++ + ++ + Sbjct: 117 LKSGAVVR-------RELERHV---------------------VSAWGERDVHQIGKRDV 148 Query: 210 AAWLSTERQN-RPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 L + R L F W + LA + Sbjct: 149 IDLLDGIADSGRVVTANRVRAYLAKFFGWCVERDI--------LATSPAAGVKPAGKETS 200 Query: 269 ADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFK-WSSMRI 327 L ++++ +++A + P + +VLLLTG R E+A + S++ W Sbjct: 201 RARVLTDDEIRWFWTACEAEGFPW-GPFGKVLLLTGQRLNEVAQMTDSEIRGDLWHLTAD 259 Query: 328 KDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVL 387 + K +PLT V L+ + + + + + ++F + ++ + L Sbjct: 260 RTKNGRAHDVPLTGAVRAALDEVERVTDEE-GRVRFIFTTTGRT--PVSGFFKARAVLAE 316 Query: 388 A-------------ELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKP---SALAEKH 431 A E+P + H LRR+ T + +P + ++ H + + Sbjct: 317 AMVGIAQKERGEPVEIPRWTFHDLRRTAATGMARLGIPVRVTEAVLNHVSGTGGGIVAVY 376 Query: 432 YRRRPLDLLRKWHEKIETWILNEA 455 R D R+ E ++L+ Sbjct: 377 QRHDYADEKRQALEAWARFVLSLV 400 >UniRef50_A5I9N5 Integrase, phage related n=12 Tax=Legionella RepID=A5I9N5_LEGPC Length = 407 Score = 184 bits (468), Expect = 5e-45, Method: Composition-based stats. Identities = 78/433 (18%), Positives = 151/433 (34%), Gaps = 58/433 (13%) Query: 32 KFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTIGNIN 90 FT +R E + + F + R T + K ++++ G T + T+G+ Sbjct: 3 NFTDTYIRNLKAKEKRYEEF----EGGGFGIRITPNNVKTWIYRYKINGVTTKFTLGHYP 58 Query: 91 DWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQEL 150 + +A+ L + G+DP+ +QA+ + T Sbjct: 59 AMSLSNAKRRFLELSQMRREGVDPKTV----------IQAQEEQDNNTVD---------- 98 Query: 151 RTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIA 210 K + T YI H+ + + L L ++ I+ Sbjct: 99 ------KLALNWYTNYIEKHVKRPLV-------IKRQIDNDIIPLLGKKKLDDVQTKDIS 145 Query: 211 AWLSTERQNRPT-VTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKA 269 L T + + ++ ++ +G + A + R + + K Sbjct: 146 DALDTIVKRGARILANRTLSSIKQMFNYA----VSRGYTQFNPASNIRSRDIGGIEKPK- 200 Query: 270 DDCLQKEQLKSWFSAVRSLNNPI---ASAYLQVLLLTGARREEIASLRWSDVDFK---WS 323 + L E++K+ + + S + +++LLLTG R E+ W ++DF+ W+ Sbjct: 201 ERVLTLEEIKALWLFLDSDLTQMSTQTRIAIKLLLLTGVRTVELRLASWHEIDFEASLWT 260 Query: 324 SMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPR--SAH 381 + K + L+ L L +SD +V I E A Sbjct: 261 IPALHSKASIIHKVHLSKLAKSLFLQLKPLSHSD-----YVLTGVDGFHPITENALPRAI 315 Query: 382 NRALVLAELPHISLHGLRRSFGT-LAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLL 440 R +P + H LRR+F T L E +++ ++ + +GHK + + R L Sbjct: 316 KRIQEKLGIPDWTAHDLRRTFATQLGETLQIDPVVIEKCLGHKMPRIMATYNRNEMLPQR 375 Query: 441 RKWHEKIETWILN 453 R+ E+ I N Sbjct: 376 REALERWAVCIEN 388 >UniRef50_A3WDG1 Site-specific recombinase, phage integrase family protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WDG1_9SPHN Length = 392 Score = 184 bits (468), Expect = 5e-45, Method: Composition-based stats. Identities = 75/413 (18%), Positives = 135/413 (32%), Gaps = 55/413 (13%) Query: 32 KFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNIN 90 + E L R + K+ +D + R SG K+FV Q GK +TIG+ Sbjct: 8 RILAEELARIVPGDAGKRRTKFDYVLPGFGERIHPSGKKSFVLQRTMGGKQRLITIGDAA 67 Query: 91 DWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQEL 150 A+ ARRL I+ G +P K K T+ Y + Sbjct: 68 ILTERIAKDVARRLILRIELGQNPAEEKQRG------------KKTPTYVSFLRHYWEVA 115 Query: 151 RTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIA 210 + + H E G+ + E+ Sbjct: 116 AP--------TWKPSTLEIHDIYRRTHLEHAFAGKF--------------IDEIGHADAV 153 Query: 211 AWLSTERQN-RPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKA 269 W ++ ++ P A +L+A + R + K Sbjct: 154 RWHASLTRSAGPGAANRAMEILKAMFGKAEAWGYL-------PEHSNPFRGVKRNRGRKI 206 Query: 270 DDCLQKEQLKSWFSAV--RSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI 327 + L + ++ A+ P A + +L LTG RR EI +L W +V + +++ Sbjct: 207 ERFLSENEMARLGYALARHRAAKPNEVAVISLLALTGCRRGEILNLTWGEV--QGRKLKL 264 Query: 328 KDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVL 387 D G R++ L +++ L + + + V ++ V Sbjct: 265 TDSKTGPRVVWLGKEARAVIDRLPRKRPHECVFQFDVLPVSA-------IEWFWRMLRVE 317 Query: 388 AELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLL 440 A + + LH LR +F +LA ++ +++GH S+ + Y L Sbjct: 318 AGIEDVRLHDLRHNFASLAARSSETLPMIGRLLGHNNSSTTAR-YAHLDDGHL 369 >UniRef50_B0KFC6 Integrase family protein n=5 Tax=Pseudomonas putida RepID=B0KFC6_PSEPG Length = 436 Score = 184 bits (468), Expect = 5e-45, Method: Composition-based stats. Identities = 89/455 (19%), Positives = 166/455 (36%), Gaps = 52/455 (11%) Query: 25 KMALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-------SGAKAFVFQSVY 77 K RQK + +R T D DV L + S ++ + + Sbjct: 19 KPPPFRQKLSDAFIRSLTTSGK-----YADGDVPGLYLQVRASLKPGKSPSRHWRLKYRL 73 Query: 78 AGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKV 137 GK IG D + +AR AR + + IDP AK KI +A+ Sbjct: 74 RGKENVYVIGRYPDVGLKEARELARAARNSVANHIDPLKAKKAKI------EAQWLNEAR 127 Query: 138 TFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLL 197 TF+ E++++ + +K+ + + +HI L ++ Sbjct: 128 TFAYVAEEWMKFKSADLVSKSVAGFRGA-LQNHI---------------------LPAIG 165 Query: 198 NLPLSELTPDYIAAWLSTERQNRPTVTAHAYR-LLRAFIKWSNYQKKYQGIIPGDLAQDY 256 P+SE+ ++I A ++ R R A R ++R+ + ++ + + + ++ Sbjct: 166 ERPVSEIKLEHITAIITELRYKRIMAMARRVRTIIRSILGFAEGRGWVERNVALSNTEEL 225 Query: 257 NVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWS 316 +R +V + + L + + LN + +++L+L R E+ +RW Sbjct: 226 KIRHVVTSNPAIER----PADLGKFLLRLDDLNLGSVAYAMRLLVLLPVRPGELVKMRWE 281 Query: 317 DVDFKWSSMRIKDKIEG-----ERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKS 371 DVD + R + I+PL LL L + D GWVF S Sbjct: 282 DVDLIGADWRYVVSKTKHLDKSKHIVPLPEQALVLLRELHKDRVVDDAGNGWVFGSPVYP 341 Query: 372 GKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLA-EWVEVPTGIVAQIMGHKPSALAEK 430 G+ I+ S + I+ HG R ++ T+A E + + ++ + H+ Sbjct: 342 GRSIDATSILKSLQKVWPEYAITAHGFRATYRTIAHEHLGIDPIVLELSLSHRMPGALGA 401 Query: 431 HYRRRP-LDLLRKWHEKIETWILNEAGITIKNNVD 464 Y R L R+ + ++ T D Sbjct: 402 VYARAQLLSQRREAAQLWANYLDQLRNNTKLALAD 436 >UniRef50_A4ACH4 Integrase n=2 Tax=Congregibacter litoralis KT71 RepID=A4ACH4_9GAMM Length = 440 Score = 184 bits (467), Expect = 6e-45, Method: Composition-based stats. Identities = 93/466 (19%), Positives = 157/466 (33%), Gaps = 62/466 (13%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYA--GKTLR 83 MA S+ + L +T K +LWD + R S G+ R Sbjct: 1 MAKSKSALSKRVLSAWTPTP--KDPYLWDGHLHGFGVRRNSNGTTTALLGYRNKYGQRRR 58 Query: 84 MTIGN-INDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVA 142 +G + + I AR +A L T I G DP K +S + + Sbjct: 59 YKVGRITDTYTITQARDDADDLLTDIGRGADPLGEK------------QSTRNALNIDQL 106 Query: 143 WEDYLQELRTGISAKTKRPYSTRYIADHIN--LSSRGGESKKRGQGPTSAGPLASLLNLP 200 + YL+ + A++ + I H+ L E R + + Sbjct: 107 LDAYLESAKFAGKAESTQYMDKSRIKRHLRPLLGPVKVEQLSRDKVRRLFSDIRDGKTAT 166 Query: 201 LSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRK 260 + + + A ++ +V + +LL A W+ +G+ + + NV Sbjct: 167 VEKTSKKRGKARVT----GGESVARSSVKLLSAIFTWAIE----EGLATENPCKGVNV-- 216 Query: 261 MVPVSASKADDCLQKEQLKSWFSAVRSLN---------------NPIASAYLQVLLLTGA 305 S + EQ KS F A+ + A+ ++VL TGA Sbjct: 217 --GQSGVREAILETPEQYKSLFDALDRMQVSNIDPDDPGEVTPIPDAAANAIRVLAFTGA 274 Query: 306 RREEIASLRWSDVDFKWSSMRIKDK-------IEGERIIPLTPYVSELLNVLAQSPNSDV 358 R+ EI RWS V+ ++ + K ++IPL ++ L + Sbjct: 275 RKSEITEARWSWVNIDAGTLTVPPKSHKSGHITGKPKVIPLPSPARAVIESLTRH----- 329 Query: 359 NKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPH-ISLHGLRRSFGTLAEWVEVPTGIVA 417 ++ +VF + G I P + A LP I+ H LR S GT+ + Sbjct: 330 GEDDFVFPATRGGGGISLPSKMWIQIRKEAGLPDGITNHSLRHSLGTIMAVQGAEAAQIM 389 Query: 418 QIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWILNEAGITIKNNV 463 +GH + ++ Y D EK I A I+ V Sbjct: 390 AALGHSQLSTTQR-YIHIARDARAAMVEKYTAGI--AAAISPTAEV 432 >UniRef50_B8J4X3 Integrase family protein n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J4X3_DESDA Length = 398 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 74/395 (18%), Positives = 135/395 (34%), Gaps = 59/395 (14%) Query: 69 KAFVFQSVYAGKTLRMTIGNIND-WKIDDARAEARRLQTLIDTGID-PRIAKAVKIAEAE 126 K + GK + +G ++ + A+A +++ G+ P + + E Sbjct: 40 KIYYIMYRLDGKKVEEKVGRESERMTV----AKAAKIREQRINGVTLPNTERRRQRLE-- 93 Query: 127 SLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQG 186 +A++ + T W+ Y G Sbjct: 94 --KAQAEAGRWTIGKLWKAYKDNN--------------------------PGLKGIVTDE 125 Query: 187 PTSAGPLASLLNLPLSELTPDYIAAWLSTERQN--RPTVTAHAYRLLRAFIKWSNYQKKY 244 L+ L ELT + ++ + T + LLR I + + Sbjct: 126 NRFKNYLSGFTKLSPEELTTQMVDTLRLKLLKSGKKAGTTKNVLELLRRIINFGVKKGLC 185 Query: 245 QGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTG 304 P L +P + + L KE+ + A ++ N A + + TG Sbjct: 186 AWQDPSRL------HFEMPKLNNVKTEMLTKEERARFIEAAKAAPNRKAGQLMLMAYYTG 239 Query: 305 ARREEIASLRWSDVDFKWSSMRIKD------KIEGERIIPLTPYVSELLNVLAQSPNSDV 358 RR E+ L+W+ +DF+ + I K + IPL+P V ELL + Sbjct: 240 MRRNELFGLKWAHIDFEHGFINIVGEKQEGAKSNRDERIPLSPPVRELLAEV------GD 293 Query: 359 NKEGWVFRSNSKSGKIIEPRSAHNRALVLAELP-HISL-HGLRRSFGTLAEWVEVPTGIV 416 N +VF ++I+ N A LP HGLR +F ++A VP V Sbjct: 294 NGSEYVFPGKDGRSRMIDMNKQVNAIKAAAGLPKDFRPLHGLRHTFASVAVSNGVPLSHV 353 Query: 417 AQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWI 451 +++ HK L ++ Y + L+ + ++ Sbjct: 354 QKLLTHKDPTLTQR-YAHLEDEALKNAANMVGNFL 387 >UniRef50_Q6ALK6 Related to integrase n=1 Tax=Desulfotalea psychrophila RepID=Q6ALK6_DESPS Length = 406 Score = 183 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 107/445 (24%), Positives = 166/445 (37%), Gaps = 65/445 (14%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVY----AGKT 81 M+ ++ FT RL + G K +D + L R + + + ++ K Sbjct: 1 MSDNKFNFTKTRLVKIQNTTG-KDIHFFDTGMKGLMLRVKANGRK-ILRARIWDTSKKKE 58 Query: 82 LRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSV 141 ++ +G + I+DAR + I GID + K + AE + Sbjct: 59 VQENLGEFPELSINDARDIVVARVSDIAKGIDVQERKKQERAEQ------------SLDD 106 Query: 142 AWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPL 201 ++ +L + P R +I L L Sbjct: 107 VFDIWLNTHAKLNIKRW--PEEVRRYELYIKR---------------------RLGKKKL 143 Query: 202 SELTPDYIAAWLSTERQNRPTVTAHAYRL---LRAFIKWSNYQKKYQGIIPGDLAQDYNV 258 SE+TPD I W + + + RAF+ S+ K I D Sbjct: 144 SEITPDVILTWRNALLKQKKQRGNDCLSTAMAHRAFVTLSSIFGKAAANI------DNPC 197 Query: 259 RKMVPVSASKADDCLQKEQLKSWFSAVR-SLNNPIASAYLQVLLLTGARREEIASLRWSD 317 K+ K + L + LK +FS + + + YL + L TGAR+ I S+RWS+ Sbjct: 198 SKVQRYKEKKRTEFLGSDHLKQFFSRLDHEATDELLRDYLLLSLYTGARQANIRSMRWSE 257 Query: 318 VDFK---WSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRS-NSKSGK 373 +D K W K K +IPL +L + D +VF S SK+G Sbjct: 258 IDLKTQLWIIPADKSKNAEPMVIPLASQAITILAKRKERYGGD-----FVFISHKSKTGH 312 Query: 374 IIEPRSAHNRALVLAELP-HISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHY 432 I EPR + L AELP H +RR+ G+ T I+ +GHK HY Sbjct: 313 INEPRRLWKKFLADAELPTSYRFHDIRRTLGSWQAISGSSTKIIGASLGHKSEQATA-HY 371 Query: 433 RRRPLDLLRKWHEK-IETWILNEAG 456 +D +RK E+ IE ++EAG Sbjct: 372 AYLTVDPVRKSVERAIEA--MHEAG 394 >UniRef50_A3WZM1 Possible phage-related integrase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WZM1_9BRAD Length = 411 Score = 183 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 78/426 (18%), Positives = 156/426 (36%), Gaps = 55/426 (12%) Query: 42 TLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAGKTL--RMTIGNINDWKIDDAR 98 + ++ D+ V R T+ G+K +V ++ Y G+ R IG + + ++ DAR Sbjct: 7 PPTTEGGRLWVADSLVPGFGVRVTNKGSKTYVLRTRYPGEASASRREIGKVGEIELTDAR 66 Query: 99 AEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKT 158 +AR LI G +P EA+ + + T + +++ + + ++ Sbjct: 67 DKARGWLKLISEGKNPTHV------EAKKRNVQIERDAATVNALLNAFVKRHVSKLRSE- 119 Query: 159 KRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLST-ER 217 T + ++ + + + +L I L E Sbjct: 120 --DQITAALDRYVR---------------------PRIGDTSIYDLKRRQIVELLDAVED 156 Query: 218 QNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQ 277 + P + +R W + L+ L ++ Sbjct: 157 KAGPVMADRVLAHVRKAFNWQAARD------DDFLSPIVRGMARTKPKERARQRVLTDDE 210 Query: 278 LKSWFSAVRSLNNPIA-SAYLQVLLLTGARREEIASLRWSDVDFK-WSSMRIKDKIEGER 335 ++ + A+ + + P Y+++LLLT RR E A + ++V+ W+ + K + + Sbjct: 211 IRDIWQALETADVPSCYPRYVKMLLLTMTRRNESADMNAAEVEGDLWTIPGKRYKNKLDH 270 Query: 336 IIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSA----------HNRAL 385 +IPL+P L+ + P + +VF + A +A Sbjct: 271 VIPLSPDAKALIG---EKPKRFKGNDWFVFSTTDGKRPFSGFSKAKVSLDLEIAKRRKAE 327 Query: 386 VLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHE 445 A +PH +LH LRR+ TL +VP + MGH + + + R LD R+ + Sbjct: 328 GRARMPHWTLHDLRRTARTLMSRAKVPEDHAERAMGHVIAGVRGTYDRYSFLDEKREAFQ 387 Query: 446 KIETWI 451 K+ + Sbjct: 388 KLADLV 393 >UniRef50_A5L0D7 Site-specific recombinase, phage integrase family protein n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5L0D7_9GAMM Length = 375 Score = 183 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 61/421 (14%), Positives = 144/421 (34%), Gaps = 64/421 (15%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTI 86 + + T + ++ +D V+TL R SG + F + + G + Sbjct: 1 MKKISLTQRFVEHVKPTSTTQE--YYDTKVSTLYLRVYPSGRRVFFVRFQHNGLRRNHKL 58 Query: 87 GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDY 146 G+ D+ + AR EA ++ + + P++ +T +++ Sbjct: 59 GSALDYSLRQARREALQVVQQVRS---PKME---------------TLPSITLQAFGQEF 100 Query: 147 LQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTP 206 + T K+ + L + + + Sbjct: 101 FKRYPRHWKPNTL----------------------KKNESAFRLQIAPYLGDREVQSIVR 138 Query: 207 DYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSA 266 + W + + A LL ++ + R A Sbjct: 139 SDVEQWFTQLSHVK-GSANQALVLLSVMMQQCEAWEYR-------PKNTNPCRGFKRYKA 190 Query: 267 SKADDCLQKEQLKSWFSAVRSL--NNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSS 324 + + L K++L+ + + +L +NP +++L+ TG R E+ +L+W + ++ Sbjct: 191 GEVERYLSKDELRQLWRVLDTLEGDNPAKVMIIRLLIYTGCRSSEVRTLQWKE--YRGGH 248 Query: 325 MRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPR--SAHN 382 + D G + + L V L+ ++ ++F + + I + Sbjct: 249 WHLLDSKTGAKTVYLCSQVRAYLDAWQ-------SESHYLFPAPCNTKPISTNQLGIFWR 301 Query: 383 RALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRK 442 +A LA L + LH LR ++ ++A +V ++++++GH + K+ D+ + Sbjct: 302 QARQLAGLEGVRLHDLRHTYASIAIQSKVNLIVLSRLLGHAEAETTLKYAHLGRDDVCQA 361 Query: 443 W 443 Sbjct: 362 A 362 >UniRef50_C9M987 Xylulose-5-phosphate/fructose-6-phosphate phosphoketolase n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M987_9BACT Length = 391 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 78/427 (18%), Positives = 140/427 (32%), Gaps = 47/427 (11%) Query: 30 RQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLR-MTIGN 88 R K T + P+ + ++D T R A+ F + LR IG+ Sbjct: 2 RIKLTQNLVS--KPPDDLIGSEIFDTATTGFMLRIGKHARTFYAVYRGKTRQLRKFKIGS 59 Query: 89 INDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQ 148 + AR + + I G DP+ + AE T E Y Sbjct: 60 ATYLTLAQARDICKSVLGRIALGQDPQEERL----------AEKTNTISLRKFFEEIYFP 109 Query: 149 ELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDY 208 ++R + R + R + PLAS+ + ++ Sbjct: 110 KIRRE----------------RPKTAQRTETNFLRILKEDLSKPLASISAERIIKIREQL 153 Query: 209 IAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQ---DYNVRKMVPVS 265 + L T +RA + ++ Q + I + + +R + P Sbjct: 154 LRRGL------GLTSVKRYENEIRASLNYAASQGLIEPIKVCEQIKCETTQRIRYLTPDE 207 Query: 266 ASKADDCLQK--EQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWS 323 + L++ E+L+ +R + + L TG RR + L W D+DF Sbjct: 208 EERLQKALKERDEELRKTHKNIRGRYADYLEPLITLSLKTGIRRGAMLRLEWRDIDFAAK 267 Query: 324 SMRIKD---KIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSA 380 ++ ++ K R IPL+P E L + + +VF S + + A Sbjct: 268 TILVRGEICKTGKSRRIPLSPIAFETLKAWREQQPQE---NKYVFPSAYTNQPKKHCKCA 324 Query: 381 HNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLL 440 L+ A + + H LR F + V V +++GH + + Y L Sbjct: 325 WKNLLIRANITNFHWHDLRHDFASKLVMAGVDLNTVRELLGHSTLEMTLR-YAHLAPSKL 383 Query: 441 RKWHEKI 447 E + Sbjct: 384 SAAIETL 390 >UniRef50_Q0EWR9 Integrative genetic element Gsu32, integrase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EWR9_9PROT Length = 391 Score = 181 bits (459), Expect = 5e-44, Method: Composition-based stats. Identities = 73/433 (16%), Positives = 150/433 (34%), Gaps = 55/433 (12%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNI 89 KFT ++ K+ + + T A R T+G K FVF G+ R++ G Sbjct: 1 MKFTDRSIKSIR--PTGKRFEVRETGRTGFAVRVSTTGTKTFVFIYKINGQKKRLSFGTY 58 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 +++A + ++ G DP + KA K ++ K +VT + Y+ + Sbjct: 59 PAMSLNEAHLLYEEAKLELEKGNDPALIKAKK--------SQLEKNEVTIPELIKLYINQ 110 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 + + E +R + L N E+ + Sbjct: 111 --------------------YAKVRKTSWEEDERQ---LNKDILPRWKNRKAIEINKSDV 147 Query: 210 AAWLSTE-RQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 A L T + P +L+ ++ K +G + + + P + + Sbjct: 148 HAVLDTLIERGAPIGANRLLAVLKKVFNYA----KEKGYVTNNPCDEITP----PATETS 199 Query: 269 ADDCLQKEQLKSWFSAVR-SLNNPIASAYLQVLLLTGARREEIASLRWSDVDFK-WSSMR 326 D L ++K+++ + + + L+ L+T RR+E+A RW+D+ W Sbjct: 200 RDRVLTANEIKTFWHQLDCTNMHSSTKNALKFQLITLQRRKEVALARWNDIHGDTWVIPA 259 Query: 327 IKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSG----KIIEPRSAHN 382 K + + L+ + +LL S ++F S +G + A Sbjct: 260 GTAKNKKRHDVHLSQFAKKLLIE----AKSYSKDSPFLFPSPCGAGSKHIRPDALSKAVK 315 Query: 383 RALVLAELPHISLHGLRRSFGTLAEWVE-VPTGIVAQIMGHKPS-ALAEKHYRRRPLDLL 440 R + + S H LRR+ T + +++ ++ H ++ + + Sbjct: 316 RNMETLMVQDFSPHDLRRTAATFLTKSKIANRLVLSLMLNHSQGKSVTAVYDKYEYFTEQ 375 Query: 441 RKWHEKIETWILN 453 +K E + Sbjct: 376 QKAWEAWGVKLEE 388 >UniRef50_Q2G674 Phage integrase n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2G674_NOVAD Length = 423 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 74/452 (16%), Positives = 154/452 (34%), Gaps = 64/452 (14%) Query: 29 SRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTIG 87 ++ T ++ P Q L D V L R SG K ++ + GK L +TIG Sbjct: 3 NKVGLTDAKIAGLKAP-AAGQIELADGIVPGLRLRMGASGIKTYILRKRVQGKWLNVTIG 61 Query: 88 NI-NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDY 146 + + AR +AR L ++ G IA + + K T + +E Y Sbjct: 62 RHGPSFTLAHARKKARDLLVDVEQGK--------SIARKAGAKRKGSKGVGTVAELYETY 113 Query: 147 LQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTP 206 L + G + R +I + + +T Sbjct: 114 LAQQIEGKKRSARE--FDRVFRKYIE---------------------PEIGDRLADSITR 150 Query: 207 DYIAAWLSTERQNRP----TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMV 262 ++ ++ R T+ YR L F W+ + ++ +P + +D Sbjct: 151 SDVSRFVEKIAFERGKETLTMARIVYRHLSTFYTWALTRLEH---MPANPCRD----AWR 203 Query: 263 PVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKW 322 P D L +L + + + P +Q+L+LT RR E+ + DFK Sbjct: 204 PKRNEPRDRVLSDRELAALWQSAVEDGYPF-GHLVQMLILTAQRRGEVLDAACDEFDFKA 262 Query: 323 SSMRIKD---KIEGERIIPLTPYVSELLNVLAQSPNSDVNKEG-----WVFRSNSKSGKI 374 + K ++P++ ++ + ++ D + + + + + Sbjct: 263 KVWTVPGDRAKNGKANVVPISAQALGVITEIFRAAGIDPDDAHKQSQILLASKVTNTNSV 322 Query: 375 IEPRSAHNRALVLAELP------HISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSA-- 426 A R + H ++H +RR+ T + + +P + ++ H+ + Sbjct: 323 SGLSKAWKRIRASVDEKLGYEAGHFTMHDIRRTVATGLQRLGIPLVVSEAVLNHQSGSAM 382 Query: 427 --LAEKHYRRRPLDLLRKWHEKIETWILNEAG 456 +A ++R + + R+ ++ A Sbjct: 383 AGVAGVYHRHQYTNEKREALALWGKEVMQIAA 414 >UniRef50_C0N6F6 Site-specific recombinase, phage integrase family protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6F6_9GAMM Length = 409 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 80/448 (17%), Positives = 139/448 (31%), Gaps = 81/448 (18%) Query: 30 RQKFTFERLRRFTLPEGKKQTFLWDADVTTLAC-RATSGAKAF-VFQSVYAGKTLRMTIG 87 +QK T + + K + D + R TSG F + + G+ LR T+G Sbjct: 4 KQKLTPSLATNMSKTKTDKHFEVTDTVMAGFKLKRYTSGTMTFSLIYTAPDGRRLRYTMG 63 Query: 88 NINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYL 147 N + AR A L + G D + K A K D Sbjct: 64 NFPALSVPAARKMAETLYAQVKLGRDIQREKQ---------TARDVKPVPKLGDFISD-- 112 Query: 148 QELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPD 207 Y +IA H K + L N L ++T Sbjct: 113 -------------TYLPWFIAHH-----------KAPKAKLPFNQFKHLFNKRLDKVTAW 148 Query: 208 YIAAWLSTERQNR--PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVS 265 I +W S ++ + + L+A + + + Q+ + S Sbjct: 149 DIESWRSKRHKDGLSASTSNRYIGTLKAMFNRAVEWEVIE--------QNPITKVKKQKS 200 Query: 266 ASKAD-DCLQKEQLKSWFSAVRSLNNPI-------------------------ASAYLQV 299 ++A L ++ + +++RS + + + + Sbjct: 201 DNRAIIRYLSPDEEERLRASLRSRDRRLTQSNPFYADGRFTRLETILGGFQDHVHPMVLL 260 Query: 300 LLLTGARREEIASLRWSDVDFKWSSMRI---KDKIEGERIIPLTPYVSELLNVLAQSPNS 356 L+ TG RR E+ +LRW DVD + I K R IPL +L + ++ Sbjct: 261 LMNTGMRRGEMFNLRWQDVDLNNKRITIVGNTSKTGQTRYIPLNVEAFNVLQMWSKQTKR 320 Query: 357 DVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIV 416 + VF + + A L A++ LH LR F + + V Sbjct: 321 NAGH---VFVGKNGK-RFTNIDKAWKVLLRDAKIHDFRLHDLRHHFASRLVSAGIDLNSV 376 Query: 417 AQIMGHKPSALAEKHYRRRPLDLLRKWH 444 +++GH + + Y L Sbjct: 377 RELLGHSDIKMTLR-YAHLAPAHLSDAV 403 >UniRef50_A4A7P6 Phage integrase n=1 Tax=Congregibacter litoralis KT71 RepID=A4A7P6_9GAMM Length = 410 Score = 178 bits (450), Expect = 6e-43, Method: Composition-based stats. Identities = 76/447 (17%), Positives = 154/447 (34%), Gaps = 50/447 (11%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSV--YAG--KTL 82 + R K T + + Q +D+ + R T G + ++ + G + Sbjct: 1 MPRVKLTATSVPHLK--TDRTQVDYFDSYLPGFGVRVTRGGTRTYIVMTRELANGHWRKR 58 Query: 83 RMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVA 142 R+ +G ++ + DAR AR + T G +A ++K TF+ Sbjct: 59 RVKLGRTSELTLADARVRARAILTAASEGKH-----LDDVAPPTPRDLLVEQSKQTFAKE 113 Query: 143 WEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLS 202 E +L R + Y + L S ++P+ Sbjct: 114 RERFLSSYRGRGGRRPVESTLGEY------------------RRCLQHNVLESWTDVPVQ 155 Query: 203 ELTPDYIAAWLSTERQ-NRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKM 261 E+T D + L T + Y +L+ W + ++ + Sbjct: 156 EITHDDVKTALQTVMDDGHESRAVKIYTVLKLLFGWLCDENL--------ISISPLSQVK 207 Query: 262 VPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFK 321 P + L +E+L ++ I + +++++LTG RR+E+A + WS+++ Sbjct: 208 RPAHIGVRERVLSEEELILIWNHA---GEGIYANIVRIMMLTGQRRQEVAGMCWSEINLD 264 Query: 322 WSSMRI---KDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPR 378 I + K ++PL+ V +L+ S + VF +N K+ + Sbjct: 265 KRRWDIPGQRTKNHRPHVVPLSSAVISILHYHRSLQASTNMQTDLVFTTNGKAVFAGWSK 324 Query: 379 SAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSA----LAEKHYRR 434 S +A L LRRSF T A + ++ + H + +A + R Sbjct: 325 SKERLDRRVAS-ADWQLRDLRRSFATHANELGYEPHVIESALNHVSGSAKRGIAGVYNRA 383 Query: 435 RPLDLLRKWHEKIETWILNEAGITIKN 461 + + ++ +L ++ Sbjct: 384 TYIRQRIRLIQRWSRHLLLLVAQARRS 410 >UniRef50_Q2RHJ2 Phage integrase n=3 Tax=Firmicutes RepID=Q2RHJ2_MOOTA Length = 390 Score = 177 bits (448), Expect = 8e-43, Method: Composition-based stats. Identities = 80/368 (21%), Positives = 135/368 (36%), Gaps = 41/368 (11%) Query: 106 TLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTR 165 I GID + +S ++ + A S T + R Sbjct: 22 AQITVGIDHEGKQRRLTLYGKS----KKEVLEKLTQALYQQQNGGFIEPSKITVEQWLNR 77 Query: 166 YIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTA 225 ++ D+ R + + + + +L ++PL +L P I +++ ++ + T Sbjct: 78 WLTDYAKPHLRQ-STWESYETVLRLHVIPTLGSIPLKKLQPADIQRLYASKLESGLSPTR 136 Query: 226 HAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAV 285 R + + + Q + G+ L Q+ P K L EQ+K + Sbjct: 137 --VRYIHVVLHEAMSQARESGL----LLQNPTEAAKPPRHPKKKVQPLNPEQVKRFLETA 190 Query: 286 RSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIK---------------DK 330 + P+ A+L + L TG RR EI LRW D+D + ++++ Sbjct: 191 KQD--PLYPAFL-LALGTGLRRGEILGLRWQDLDLQKGILQVRQSLIRTREGLKFEEPKT 247 Query: 331 IEGERIIPLTPYVSELLNVLAQSPN-------SDVNKEGWVFRSNSKSGKIIEPRSA--- 380 + R IPL P V L N D VF ++G+ +P+ Sbjct: 248 EKSRRQIPLPPSVVAALKRHKAWVNQNKLILGPDYEDHDLVFPV--ENGRPRDPKGFAEY 305 Query: 381 HNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLL 440 NR L A LPHI LH LR + TL V +V + +GH ++ Y L Sbjct: 306 FNRLLDKAGLPHIRLHDLRHTHATLLLLEGVHPKVVQERLGHSTVSITLDIYSHILPGLQ 365 Query: 441 RKWHEKIE 448 K E+I+ Sbjct: 366 EKAAERID 373 >UniRef50_A8UVD2 Phage integrase family protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UVD2_9AQUI Length = 361 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 72/384 (18%), Positives = 124/384 (32%), Gaps = 55/384 (14%) Query: 70 AFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQ 129 + F+ Y GKT +G +N+ + A+ A +L+T I Q Sbjct: 23 SHWFRFTYRGKTYTKRLGRVNELPLTSAKHIAGKLRTQI-----------------IENQ 65 Query: 130 AESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTS 189 +K FS E Y + +T + ++ K+ Sbjct: 66 YLEKKEVPLFSEVAEKYFEWYKTERANASR------------RTIRETERRVKKLVEVFG 113 Query: 190 AGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIP 249 L + D I + +P+ +LRA ++ Y G +P Sbjct: 114 DKTLDYFSEFLIDSYKQDRIKEGV------KPSTVNRELNILRAILRKVKEWGMYSGDLP 167 Query: 250 GDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREE 309 R + L E+LK+ A P+ ++ LTG R E Sbjct: 168 ---------RIKTYKVDDERVRYLSPEELKALIDACPDWFKPV----VKFACLTGLRASE 214 Query: 310 IASLRWSDVDFKWSSMRIKDKIEGER---IIPLTPYVSELLNVLAQSPNSDVNKEGWVFR 366 + SL W V+ + + K + IPL P E+L + G+VF Sbjct: 215 LFSLTWDMVNLSEGYITVPAKYSKTKETKRIPLHPKALEVLREVKARQEERWIDYGYVFT 274 Query: 367 SNSKSGKIIE---PRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHK 423 + +E + A A + H LR +F + V V ++M H Sbjct: 275 NRMGKPYSVEGQGYKRVFKTACEKAGIRDFRFHDLRHTFASYLVMSGVDFYTVQELMRHS 334 Query: 424 PSALAEKHYRRRPLDLLRKWHEKI 447 + ++ Y + +RK EK+ Sbjct: 335 SPRMTKR-YAHLSPEHIRKELEKV 357 >UniRef50_A8ZUN3 Integrase family protein n=2 Tax=Desulfobacteraceae RepID=A8ZUN3_DESOH Length = 397 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 78/419 (18%), Positives = 133/419 (31%), Gaps = 72/419 (17%) Query: 38 LRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDA 97 +R K T K + + GK + N +D A Sbjct: 21 IRCIACKTETKLTA---KKCPGCGAAFPVRNKTYKVTVKHGGKKKTKLVDN-----LDLA 72 Query: 98 RAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWE-DYLQELRTGISA 156 R +L+ I G + +++K T W+ DYL +R Sbjct: 73 REIETKLKHDITRG---------------TFHLQTQKQAPTLDAFWDKDYLPWIR----- 112 Query: 157 KTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTE 216 K+ + I +L+ L L +T I LS Sbjct: 113 SNKKSWYEDAINYQTHLA-------------------PKLGQKRLDAITQLDIERLLSGL 153 Query: 217 RQN--------RPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 R+ H LL + KY G P L P ++ Sbjct: 154 RKGTSKRGKPYAAATIKHQIVLLTRMFNVAARWGKYTGPNPCKLIAK-------PRLNNQ 206 Query: 269 ADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIK 328 L ++L + + +++ ++ LL TG RR E+ L W DV+ ++ ++ Sbjct: 207 KTGFLTDDELTRLLDVLEQWPDRMSAGFIAFLLHTGLRRGELFRLTWQDVNMDRQTLTVR 266 Query: 329 DKIEGERII-PLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVL 387 D G + PL+ + LN L + + +VF + + + + R R Sbjct: 267 DPKGGRDTVLPLSEKAIDALNSLPREHET-----PFVFYGRNGAQR-ADFRHPWYRIKQA 320 Query: 388 AELP-HISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHE 445 A LP LH LR F + V ++ HK +A+ ++ Y LR + Sbjct: 321 AALPEGFRLHDLRHHFASALVSAGTNLYTVQALLTHKSAAMTQR-YAHLSDQALRDAVK 378 >UniRef50_A5IH69 Site specific recombinase n=2 Tax=Legionella pneumophila RepID=A5IH69_LEGPC Length = 407 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 71/436 (16%), Positives = 137/436 (31%), Gaps = 74/436 (16%) Query: 42 TLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAE 100 L K+ + D D+ R SG +V Q + ++ +G + AR + Sbjct: 12 KLLPRDKEYEVHDLDLKGFMIRVFPSGTMRYVCQYK---RGKKINLGTVGVMTAAQAREK 68 Query: 101 ARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKR 160 A + + + GI+P K T E + + + + KR Sbjct: 69 AIEVLSNANKGIEPTAQK-------------GINKPKTLQEFIES---DYKPWVLSTHKR 112 Query: 161 PYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNR 220 T + + PL E+TP + W Sbjct: 113 GQET---------------------LAGLIRCYKAFFSKPLGEITPALVEQWRVKRLNEG 151 Query: 221 PTVT--AHAYRLLRAFIKWSNY-----QKKYQGIIPGDLAQDYNVRKMVPVSASKADDCL 273 + +L++ + + + + P + + +R + ++ + L Sbjct: 152 TSQATLNRNISMLKSLMTKAVEWGFLKENALGKLKPYKIDRSPKIRYLSFAEEARLREAL 211 Query: 274 --QKEQLK------SWFSAVRSLN----------NPIASAYLQVLLLTGARREEIASLRW 315 + QL+ + + R + + + + TG RR E+ L W Sbjct: 212 IERDNQLRLMRKNGNLWREKRGYDLLPELSEDNACDYLMPMVLLSINTGLRRGELFHLTW 271 Query: 316 SDVDFKWSSMRIKD---KIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSG 372 V+ S+ + K + R IPL ++L+ L + KEG VF S + Sbjct: 272 DMVNLSEGSLILSGEITKNKHSRYIPLNDEAYKILDNLHKKAE---RKEGLVFPSKNN-Q 327 Query: 373 KIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHY 432 + + L A + H LR F + V V +++GH A+ + Y Sbjct: 328 PFNHVKRSWGSLLKKANITQFRWHDLRHHFASKLVMAGVDLNTVRELLGHSDIAMTLR-Y 386 Query: 433 RRRPLDLLRKWHEKIE 448 + KI+ Sbjct: 387 AHLAPEHKVNAVRKID 402 >UniRef50_B5S678 Integrase protein n=1 Tax=Ralstonia solanacearum RepID=B5S678_RALSO Length = 437 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 96/435 (22%), Positives = 160/435 (36%), Gaps = 49/435 (11%) Query: 29 SRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAGKTLRMTIG 87 R T + R P+GK Q FL D++ +L R T+ GAK+FVF++ GKT+R TIG Sbjct: 14 QRVALTAGHIERLKCPDGKDQAFLRDSEAPSLRVRVTAAGAKSFVFEAKLRGKTIRTTIG 73 Query: 88 NINDWKIDDARAEARRLQTLIDTGIDPRIA-KAVKIAEAESLQAESRKTKVTFSVAWEDY 146 + W I+ ARAEARRL +D GIDPR + AE A R T DY Sbjct: 74 AVQSWTIEAARAEARRLSVTVDCGIDPREQLREAIEAENRERDARKRAEHFTLRRLLTDY 133 Query: 147 LQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTP 206 K + +H+ + P + + +T Sbjct: 134 AD--YLEQQGKPSHRDARSIFKNHVFI------------------PWPTTCKMAACIVTH 173 Query: 207 DYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDL-------AQDYNVR 259 +A ++ + TA+ LR+F+ + P Sbjct: 174 HEVAMFMRKAMDKGHSRTANK---LRSFMMAAFQVAITASSNPKTPLCFHGYGLTSNPAA 230 Query: 260 KMVP--VSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLT-GARREEIASLRWS 316 VP + + L ++L+S++ A++ L I A L++ LLT G R E++ +LR + Sbjct: 231 ATVPDDSANQPDKNPLSLQELRSYWQAIKDLEG-IRGAALRLHLLTGGQRIEQLVTLRTA 289 Query: 317 DVDFKWSSMRI----KDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSG 372 V ++ K +PL P +E L + + + Sbjct: 290 KVAETEITLFDGKGRPGKPPRPHTVPLIPLAAEALREFK-------PSKEYALSTTGGDT 342 Query: 373 KI-IEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKH 431 + SA + A + +R T + + ++ H + + ++H Sbjct: 343 HLAASTLSAWAKETAPATIAGFQAKRIRSGVETALAAARISKDVRGRLQSHGITGVQDRH 402 Query: 432 YR-RRPLDLLRKWHE 445 Y +D R E Sbjct: 403 YDGHEYMDEKRHALE 417 >UniRef50_Q2SP99 Integrase n=2 Tax=Gammaproteobacteria RepID=Q2SP99_HAHCH Length = 416 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 82/447 (18%), Positives = 174/447 (38%), Gaps = 58/447 (12%) Query: 35 FERLRRFTLPEGKKQTFLWDADVTTLACRATSG----AKAFVFQSVY--AGKTLRMTIGN 88 +L + K +T +D L+ R A+ +VF+ K ++++G+ Sbjct: 1 MGKLSDTKIRNAKTETDTCLSDGNGLSLRIYPKRGKIARTWVFRYRRPATKKPAKLSLGD 60 Query: 89 INDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQ 148 + AR +A ++ + G+DP+ + + AE + +T +E +L Sbjct: 61 YPVISLRAARQQAEIMRQQLFEGLDPQYVQKEQRAENANA--------ITTQQLFESWL- 111 Query: 149 ELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLAS--LLNLPLSELTP 206 K+ + + R +ADH E++ R S GPL + ++ ++ + Sbjct: 112 -----TLQKSAKEVTDRTLADH--------EARWRVHLEKSLGPLLAKHVIRRQIAAVLD 158 Query: 207 DYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSA 266 +A + E T LL+ +++ + +I + + + + + Sbjct: 159 SMVAKGIKEE-------TRKCLCLLKMLFRFAEERH----LIKENPIEGLSAKSFKITAG 207 Query: 267 SKADDCLQKEQLKSWFSAVRSLN-NPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSM 325 + D L +L+S++ + S + P + ++L+LTGARR E+ +RWS++D Sbjct: 208 APRDRALPLSELRSFWRLLDSASITPATANAFKLLILTGARRGEVTMMRWSELDLTQGMW 267 Query: 326 RI---KDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIE--PRSA 380 + + K + L L+ + +V + + Sbjct: 268 VLPPERTKNRKAHTLYLPNLAMRLIESM----RPISGHGEYVLSLGNGITPLSTEGLTVT 323 Query: 381 HNRALVLAE-LPHISLHGLRRSFGT-LAEWVEVPTGIVAQIMGHKPSALAEKHYRR-RPL 437 R E +PH ++H LRRS T E ++ ++ +++ H+P Y+R + Sbjct: 324 LRRLSTRLESVPHFTVHDLRRSAATAWGEHLKTSPHVIEKMLNHQPRDRLVATYQRAAYI 383 Query: 438 DLL----RKWHEKIETWILNEAGITIK 460 D + W E +E + N+ G + Sbjct: 384 DEQKMAWKAWGEMVENHVANDFGNVVP 410 >UniRef50_Q39TC0 Phage integrase n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39TC0_GEOMG Length = 414 Score = 176 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 74/460 (16%), Positives = 148/460 (32%), Gaps = 84/460 (18%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-------TSGAKAFVFQSVYAGKTLR 83 +F+ + ++ PE KK + A G K F++ GK Sbjct: 3 TQFSDKFIQNLK-PEAKKYYI---RESRGFAIVVHPSGIKNPKGTKTFLYIYTINGKRKE 58 Query: 84 MTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAW 143 + +GN + + DAR + + G DP ++AE + +TF Sbjct: 59 LKLGNYPEVTLKDARIKHGEAYARLVNGEDP--------VTPPVIKAEPQDENLTFGHFT 110 Query: 144 EDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSE 203 E YLQ + S K D L ++ Sbjct: 111 ELYLQWSKDNHSPKWHNTIKCALNKD----------------------ALPVWEYTLIAS 148 Query: 204 LTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVP 263 + A+L + V ++ + ++ ++ I + + + Sbjct: 149 IKRRDAIAFLENVARRGIQVIN-LHKATSSVFDYALEREY----IESNPMAGLKAKTIPA 203 Query: 264 VSASKADDCLQKEQLKSWFSAVRS-LNNPIASAYLQVLLLTGARREEIASLRWSDVDFK- 321 + + L ++K + A+ L+++++T R E+A++ ++ Sbjct: 204 LKPKARERFLSDSEIKHVWKAIDEGPGYDETKRALKLIMVTAQRPGEVAAMHRREIQTGV 263 Query: 322 -------------WSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSN 368 W+ + K E I LTP EL+ + EG++F S Sbjct: 264 GKPRCKICKRCGWWTIPAERMKNGEEHRIYLTPTALELI----------GDAEGYIFPSP 313 Query: 369 SKSGKIIEPRSAHNRALVLA-------------ELPHISLHGLRRSFGTLAEWVEVPTGI 415 I + + LP + H LRR+ TL V VP Sbjct: 314 QDGQPINRNSLSQLVSRERNNKKPNGEMYPPYYGLPEWTPHDLRRTARTLLARVGVPEEH 373 Query: 416 VAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWILNEA 455 +++ HK L +++ R ++ ++ K+E ++ + Sbjct: 374 AEEVLSHKKEGLVDRYNRHDYMEEKKEALIKLEAELMKLS 413 >UniRef50_B4BIA4 Integrase family protein n=2 Tax=Geobacillus RepID=B4BIA4_9BACI Length = 384 Score = 176 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 69/379 (18%), Positives = 140/379 (36%), Gaps = 42/379 (11%) Query: 108 IDTGIDPRIAKAVKIAEAE-SLQAESRKTKVTFSVAWED--YLQELRTGISAKTKRPYST 164 ID G DP K + + + E++K + +D Y +E S +R ++T Sbjct: 19 IDVGKDPVTGKRKQASFGPFRTKTEAKKELLKIKNQVDDGSYFKESTEDFSMFMERWFNT 78 Query: 165 RYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVT 224 Y +++ E R + ++E+T I ++ + + Sbjct: 79 SYKRTVEITTAKSREYVIRNHIMKY------FQHKKINEITTFDIDSFYVDKLDTGYSGA 132 Query: 225 AHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSA 284 R + + + Q ++ + ++ P S+ +++ + + Sbjct: 133 --YIRQMHNLLNQAFDQAVKWSLVKVNPVKNAKP----PKVKSEEKITWTVDEVNRFLNL 186 Query: 285 VRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI----------------K 328 ++ + I + + TG RR E+ L+W DVDF+ +RI Sbjct: 187 IKDSSMEIPY---LLAIFTGMRRGEVLGLKWDDVDFENKKIRIKRSLCFVSGKGLIFKEP 243 Query: 329 DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNS-----KSGKIIEPRSA--- 380 + +R I ++ +V +L Q K G ++ N+ GK ++PR+ Sbjct: 244 KTKKSKRQISISQHVVNVLKKHKQKQEFQKEKLGVQYQDNNLIVCTDDGKPLDPRNLLRQ 303 Query: 381 HNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLL 440 R + A +P IS H LR + T+ +V++ +GH + Y DL Sbjct: 304 FYRLIEEANVPRISFHDLRHTHATILMQQGENPKVVSERLGHSRVGITLDLYSHVSDDLQ 363 Query: 441 RKWHEKIETWILNEAGITI 459 + EK E +L ++ + Sbjct: 364 EQAAEKFENALLKQSQNPL 382 >UniRef50_B9R4Q2 Site-specific recombinase, phage integrase family protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R4Q2_9RHOB Length = 434 Score = 174 bits (442), Expect = 5e-42, Method: Composition-based stats. Identities = 91/450 (20%), Positives = 157/450 (34%), Gaps = 47/450 (10%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQS-VYAGKTLRMT 85 + T + + P +Q L D V L R T S K++ + GK +RMT Sbjct: 1 MPTLPLTDQHCKALK-PTATRQE-LRDTKVPGLILRCTPSNIKSWSLRYADVTGKHVRMT 58 Query: 86 IGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWED 145 IG + DAR A ++ + TG DP K A+A A T +T D Sbjct: 59 IGRYPAVSLSDARTAALQVLAEVSTGKDP--VADRKAAQAAEKAAREAATALTVEKIGND 116 Query: 146 YLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 Y + G +P + +G + L + +L Sbjct: 117 YFEAAAKGRHRPKGKPKKPSTLG--------------YERGYFDSFVLPKFGKSAIGDLH 162 Query: 206 PDYIAAWLSTERQNRPTVTA-HAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPV 264 + ++ + T + ++LR ++ +Q+ L R + Sbjct: 163 RRAVQTFIDGLADDHNLSTGVQSLKVLRQICAYAEFQE---------LISANPCRFVEAT 213 Query: 265 SASKADDCLQKEQLKSWFSAVRS----LNNPIASAYLQVLLLTGARREEIASLRWSDVDF 320 + L +LK+ + A+ + +NP A+ +++ T RR E+A S++DF Sbjct: 214 DYDSRERVLTDAELKAIWKALENPYAIASNPQAAIAVRICAATAQRRAEVAKAELSELDF 273 Query: 321 KWSSMRI---KDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKII-- 375 + + + K I+PL+ +LL A + + D K VF G + Sbjct: 274 DNAIWTMPGSRRKNGRTHIVPLSDLAVQLLRA-AIALHEDGYKGAAVFPPLRGEGAAMAV 332 Query: 376 -EPRSAHNRALVLAELPHISLHGLRRSFGTLA--EWVEVPTGIVAQIMGHKPS----ALA 428 A A + LH LRR+ T E + + V+ +GH A Sbjct: 333 ENLTRCFAAAAEAAGVKDTRLHDLRRTAATNMTGERLTIARSTVSLCLGHDDGANAAAAT 392 Query: 429 EKHYRRRPLDLLRKWHEKIETWILNEAGIT 458 + R L R+ + +L G T Sbjct: 393 RVYDRYGYLPEKRRALTAWASLLLEIVGET 422 >UniRef50_B0T7J1 Integrase family protein n=4 Tax=Alphaproteobacteria RepID=B0T7J1_CAUSK Length = 515 Score = 174 bits (441), Expect = 6e-42, Method: Composition-based stats. Identities = 94/446 (21%), Positives = 167/446 (37%), Gaps = 52/446 (11%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVY--AGKTLR 83 M + R + + +F L + + + D D+ K+F QS + GK + Sbjct: 1 MTVQRVYLNDKNVFQFPL-AAEGRYIVRDDDLRGFFLIVGRRRKSFTVQSEHWSNGKRVC 59 Query: 84 MTI--GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSV 141 T+ G+ D +AR +A+ + I G K A + A VT Sbjct: 60 KTVLVGHAGDMTTREARTQAKLILAQIANGE--LQNSQSKGAAGTTTPASLPTHGVTLRQ 117 Query: 142 AWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPL 201 AW YL + K + P + + ADHI L+ L+LPL Sbjct: 118 AWARYLTAH---LERKERSPATIKGYADHIERV------------------LSDWLDLPL 156 Query: 202 SEL--TPDYIAAWLSTERQ-NRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNV 258 L P +A + N P+ A R LRA + + LA D+N Sbjct: 157 QVLGENPVMVAERHDRMSKDNGPSAANGAMRTLRAIYNHARKSHRELPPENPTLAVDWN- 215 Query: 259 RKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDV 318 + + + E L +WF+ R + +PI + + LL+G+R + R + Sbjct: 216 ------RERRRNTAMGVEDLPTWFAQARLMRHPIRREFHLLTLLSGSRPGALLQARVEHI 269 Query: 319 DFKWSSMRIKDKIEGERI---IPLT-PYVSELLNVLAQSPNSDVNK-EGWVFRSNSKSGK 373 ++K + I G IPL+ P + L+ + S ++ + WVF +S+ G Sbjct: 270 NWKDRILHIPRPKGGADRAFDIPLSRPMIRCLIRAMRASRILFPDQAQEWVFAGDSQDGH 329 Query: 374 IIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYR 433 ++E + A LR+++ T+ + + + +M H + + Sbjct: 330 MVEHKEARTVLSKWGN-------DLRQTYRTIGQASGLSDVDMHLLMNHSLPGVNAGYIT 382 Query: 434 RRPL--DLLRKWHEKIETWILNEAGI 457 R L LR E + +++ +GI Sbjct: 383 RAKLLRGHLRATQESLSKMMIDASGI 408 >UniRef50_A4Y9I4 Phage integrase family protein n=3 Tax=Shewanella RepID=A4Y9I4_SHEPC Length = 432 Score = 174 bits (441), Expect = 6e-42, Method: Composition-based stats. Identities = 75/423 (17%), Positives = 143/423 (33%), Gaps = 73/423 (17%) Query: 59 TLACRA-TSGAKAFVFQSVYAGKTLRMTI--GNINDWKIDDARAEARRLQTLIDTGIDPR 115 L R T G + + GK M G + +A+AEA +++ L GIDP Sbjct: 33 GLYIRVQTEGVAYWEVRYSVNGKRRSMVPNGGVYPAMSLVEAKAEAAKVKLLAKQGIDPL 92 Query: 116 IAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSS 175 + + + T T + ++D+ ++ Sbjct: 93 AER----------ERQQEITIKTVNDLFDDW------------------------YQCTA 118 Query: 176 RGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTE-RQNRPTVTAHAYRLLRAF 234 + + + ++ L ++++ I A L + NRPTV + Sbjct: 119 PRLKHPEIPMRMYTKDIKPAIGQLKVTDVNARDIRAILHKVVKSNRPTVANKTLLFCKQL 178 Query: 235 IKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIAS 294 + G + A +N + ++ L ++ + F +R+ + Sbjct: 179 FNHACKLDVASG----NPAAAFNTADAGGLEKNRT-RVLSLNEIAAAFPVLRNSRPIFSH 233 Query: 295 A---YLQVLLLTGARREEIASLRWSDVDFK---WSSMRIKDKIEGERIIPLTPYVSELLN 348 + +LL G R+ E+ + +WS+ DF W + + K IPL+ +V E L Sbjct: 234 ENYLAVALLLCLGVRKGELIAAKWSEFDFDQQVWRMPKERSKTGVGITIPLSEFVIEWLK 293 Query: 349 VLAQSPNSDVNKEGWVFRSNSKS--------------------GKIIEPRSAHNRALVLA 388 L +VF + S K + L A Sbjct: 294 EL----KIIACGSEYVFPARKASKRREYIANDTLNHALAKLFGQKHDSNKQPFENLLGKA 349 Query: 389 ELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIE 448 + H ++H LRR+ TL ++VP I + + HK + + L+ R+ +K+ Sbjct: 350 GVEHFTVHDLRRTCRTLLASLKVPPHIAERCLNHKLKGIEGTYNHHDYLEERREALDKLA 409 Query: 449 TWI 451 I Sbjct: 410 ALI 412 >UniRef50_B3R9I1 Prophage INTEGRASE PROTEIN n=1 Tax=Cupriavidus taiwanensis RepID=B3R9I1_CUPTR Length = 412 Score = 174 bits (441), Expect = 7e-42, Method: Composition-based stats. Identities = 72/451 (15%), Positives = 146/451 (32%), Gaps = 65/451 (14%) Query: 32 KFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNIN 90 K + R + K F+ D + L R SG K F + AG +G Sbjct: 3 KLNNRLIERSKIQPKTK--FIADGE--GLYLRLEPSGTKTFCLRYTVAGSRKLKVLGTFP 58 Query: 91 DWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQEL 150 D I AR +A ++ L++ + S + ++ + +T + ++ Sbjct: 59 DMDIAAARKQASEMRELLEV---------HDSLPSASKEVDALTSPITVAQLATEW---E 106 Query: 151 RTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIA 210 + KRP + + + + + +T +++ Sbjct: 107 MRYCRQRYKRPDKELHYLK--------------------SDIVPVIGQELVQNVTGRHVS 146 Query: 211 AWLSTERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKA 269 + T +L++ ++ G I +K + Sbjct: 147 LVIGKIVDRGARTKANRTLCVLKSLFGYAVE----HGYIDATPVAM--TKKGAGGAEKAR 200 Query: 270 DDCLQKEQLKSWFSAVRSLNNPIA---SAYLQVLLLTGARREEIASLRWSDVDFKWSSMR 326 L +++++ + A+ S + A L+++LLT R E +RW DVD Sbjct: 201 SRVLNPKEIETLWHALDSRRRRMNWRTKALLKLILLTAQRPGECCGMRWEDVDLANGIWF 260 Query: 327 IK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNR 383 + K + + ++ L+ +L + + + +VF S K + A R Sbjct: 261 LPAELTKSDRDHVVHLSHMAVSILKMAEK----ETGGSVYVFNSVVKGRDVATTVDALTR 316 Query: 384 ALVL-------AELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRP 436 A+ + + H LRR+ T V I +I+ H+ + + Sbjct: 317 AVARMLANGEFGAMKRFTPHDLRRTASTGMANAGVYPHITEKILNHRMKGVLAVYNHGEY 376 Query: 437 LDLLRKWHE----KIETWILNEAGITIKNNV 463 L + E IE W+ N G + Sbjct: 377 LPERKAAMELWGRLIEGWVGNLVGQVSEVGQ 407 >UniRef50_A0LQG0 Phage integrase family protein n=2 Tax=Deltaproteobacteria RepID=A0LQG0_SYNFM Length = 415 Score = 174 bits (440), Expect = 7e-42, Method: Composition-based stats. Identities = 75/392 (19%), Positives = 136/392 (34%), Gaps = 32/392 (8%) Query: 69 KAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDP-RIAKAVKIAEAES 127 K + GK L +G + AR A ++ G P R + E Sbjct: 26 KVYYILFKQDGKVLEEKVGRQFVDDMTPAR--AAGIRAERIEGKRPSRKEIKEEREAQEH 83 Query: 128 LQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGP 187 E+ + T + WE+Y + G HI + + G Sbjct: 84 AVKEAEANRWTITRLWEEY----KRGTPGLKGIVTDENRFEKHIKPIFGDKQPHELGALD 139 Query: 188 TSAGPLASL--LNLPLSELTPDYIAAWLSTERQN--RPTVTAHAYRLLRAFIKWSNYQKK 243 + L P + TP + + +P + LLR I + Sbjct: 140 VDRLRIGLLKKARKPAVQKTPGDSKPGTVKKSVDPLKPGTVKNVLELLRRIINFG----- 194 Query: 244 YQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLT 303 + +L +P + + L ++L A+ N IA+ +++ L T Sbjct: 195 ----VKKNLCTGAGFAIELPKVNNLRTEDLTPDELAKLMDAIEKDENLIAANLMKMALFT 250 Query: 304 GARREEIASLRWSDVDFKWSSMRIKDKIEG-ERIIPLTPYVSELLNVLAQSPNSDVNKEG 362 G RR E+ L+WSD+DF+ + I+ G ++ IP+ ++L + G Sbjct: 251 GMRRGELFRLKWSDLDFERGFIHIRGPKGGVDQTIPVNEEARKILQSHRR------TNSG 304 Query: 363 WVFRSNSKSGKIIEPRSAHNRALVLAELPH-IS-LHGLRRSFGTLAEWVE-VPTGIVAQI 419 +VF +I + + N+ A LP LHGLR ++ ++ V + ++ Sbjct: 305 FVFPGRGGHQRI-DIHKSVNKIKEAAGLPKGFRALHGLRHAYASMLASSGKVDLYTLQRL 363 Query: 420 MGHKPSALAEKHYRRRPLDLLRKWHEKIETWI 451 + HK + ++ Y LR + I Sbjct: 364 LTHKSPTMTQR-YAHLRDSALRNASDLAGEII 394 >UniRef50_C6HW36 Putative phage integrase n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HW36_9BACT Length = 367 Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 80/399 (20%), Positives = 140/399 (35%), Gaps = 74/399 (18%) Query: 61 ACR-ATSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGI-DPRIAK 118 R G+ + + GK +R +G A+A RL+T G PR K Sbjct: 10 GIREIPPGSGVWWVDLRHEGKRIRRKVGPK-----TAAKAVYERLKTEAREGRLVPREKK 64 Query: 119 AVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGG 178 + E + + + R G++ K + Sbjct: 65 RIFPTVREVVTERASRFS-------------GRQGVNEKRYASWW--------------- 96 Query: 179 ESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNR---PTVTAHAYRLLRAFI 235 + + ++LTP + L+ R +R P H + LRA + Sbjct: 97 --------------IEKIGEKRTNDLTPSDLRKILNEARDSRDLSPQTINHFFGHLRAAL 142 Query: 236 KWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASA 295 + G I Q +++ +P + + E+L+ +R + P Sbjct: 143 NEALR----DGKIDHSPMQGFSL---LPTPRGRLRFLTEGEELR-----LREVMTPADFR 190 Query: 296 YLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEG-ERIIPLTPYVSELLNVLAQSP 354 ++ +LTG RREE SL WSD+D + + I G R +PL+ E+L + Sbjct: 191 LVRFAILTGLRREEQFSLTWSDIDLQNRVLTIPRSKHGGTRHVPLSDEAVEILKAIRTER 250 Query: 355 NSDVNKEGWVFRSNSKSGKIIEPRSAHNR----ALVLAELPHISLHGLRRSFGTLAEWVE 410 W F S + + I +P++ + R AL A + + H LR + + Sbjct: 251 RV---VSAWCFPSQNPATHI-DPQNFYRRVYLPALEKAGIKDVIWHTLRHTCASRLVMAG 306 Query: 411 VPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIET 449 V V +I+GHK A+ + Y L + +I Sbjct: 307 VDIRTVQEILGHKTLAMTTR-YSHLSGAHLTQAVNRISK 344 >UniRef50_A5L0D6 Site-specific recombinase, phage integrase family protein n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5L0D6_9GAMM Length = 434 Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 68/432 (15%), Positives = 135/432 (31%), Gaps = 65/432 (15%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTI 86 + FT + ++ + +WD V L R T G + +V K T+ Sbjct: 1 MKSLLFTSKVIQSLN--SKTRTYTVWDTQVPALGVRVYTDGRRFYVTHLSIPNK----TL 54 Query: 87 GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDY 146 + + R R LQ + E+ + W D Sbjct: 55 AAVGQLTLKKVRQHVRALQA--------------SFLDKETKPIRLIRFDALVKEEWADK 100 Query: 147 LQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTP 206 + + + T + + L P+S + Sbjct: 101 VCKGWKLSTQGTASSALKKNL-------------------------LPEFGRFPVSCIDS 135 Query: 207 DYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSA 266 ++ W Q+ +LR+ K++ Q D + Sbjct: 136 CHVHRWFDELSQSYAGTANRNLDVLRSIFKYAVKQGY---------CIDNPCDGLKQNRK 186 Query: 267 SKADDCLQKEQLKSWFSAV-----RSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFK 321 K + L ++L A+ + L+++LLTG R E+ L+WS V K Sbjct: 187 RKLNRFLSLDELARLHKALTVVSQQGELEACCCQVLELVLLTGCRISEVTGLQWSFV--K 244 Query: 322 WSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKE-GWVF-RSNSKSGKIIEPRS 379 + D G +++ + +LL+ + Q + ++ VF + + Sbjct: 245 GREWHLPDSKTGAKVVYVGKEAQQLLSDIPQQVGAHRSESHDDVFTPLRRFVSRSTKVSM 304 Query: 380 AHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDL 439 + LA + + +H LR +F + A P +V++++GH + + Y Sbjct: 305 VWQQVRALAHIEDVRIHDLRHTFASYAVLEGYPIPMVSKLLGHTRISSTLR-YAHVDDAQ 363 Query: 440 LRKWHEKIETWI 451 + + E I I Sbjct: 364 VSQSAEAIGEVI 375 >UniRef50_A1VGL4 Phage integrase family protein n=1 Tax=Desulfovibrio vulgaris DP4 RepID=A1VGL4_DESVV Length = 417 Score = 173 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 84/411 (20%), Positives = 147/411 (35%), Gaps = 65/411 (15%) Query: 65 TSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAE 124 T + + G+ + IG + A +A ++ + G + Sbjct: 57 TGTERVYYALYKRDGRLIETKIGRQFSDDLTPA--KAALIRAQLIEGR--------RSTR 106 Query: 125 AESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRG 184 E QAE T WE+Y K ++P I D Sbjct: 107 KELRQAEMDNAPWTILTLWEEY----------KRRKPNLKGIITD--------------- 141 Query: 185 QGPTSAGPLASLLNLPLSELTPDYIA--AWLSTERQNRPTVTAHAYRLLRAFIKWSNYQK 242 L L N+ E+T + +P + LLR I + + Sbjct: 142 -QNRFEVHLRHLQNMKPEEITTTLVDNLQLSLANSGKKPGTIKNVIELLRRIISFG---E 197 Query: 243 KYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLL 302 K I P + + + P+ ++ + L EQL + +A+ S + A + + L Sbjct: 198 KKGLITPSQICAHFEM----PILNNQKTEDLTPEQLNNLIAAIESTKHKKAGQMMLLALY 253 Query: 303 TGARREEIASLRWSDVDFKWSSMRIKDKIEG--------ERIIPLTPYVSELLNVLAQSP 354 TG RR EI +L+W +D+ + I + +G ER IPL +LL + + Sbjct: 254 TGMRRGEIFNLKWEHIDWHRGFINIVGRDDGLGAKSGQCER-IPLNDLARQLLLSVPKGQ 312 Query: 355 NSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPH--ISLHGLRRSFGTLAEWVE-V 411 + +VF S G++++ R + A LP HGLR + +L V Sbjct: 313 SR------YVFPGKS-GGRLVDIRKQADALKKEAGLPDSFRPFHGLRHVYASLLASTGKV 365 Query: 412 PTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWILNEAGITIKNN 462 + ++M HK +A+ ++ Y D L+K + IL + + N Sbjct: 366 SMYELQKLMTHKSAAMTQR-YAHLRDDALKKASQTASEAILTALNTSSRIN 415 >UniRef50_A5G635 Phage integrase family protein n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G635_GEOUR Length = 437 Score = 173 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 68/447 (15%), Positives = 160/447 (35%), Gaps = 65/447 (14%) Query: 24 RKMALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTL 82 RK FT ++ PE + + A R +G K + + + GK Sbjct: 13 RKPGP----FTDRFIKSLK-PESEMYQV---REGRGFAIRVLPTGVKTWYYIYTFNGKRR 64 Query: 83 RMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVA 142 ++ +GN D ++DA L+ G+DP ++ R+ +A Sbjct: 65 QLNLGNYPDKSLEDAHKVYLESAALVKNGVDPMDKPVAADPPPPQVELTVRR------LA 118 Query: 143 WEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLS 202 + YL E +S + ++ + +++ A L + + + Sbjct: 119 VDLYLDE------------WSKIHHSERWHYNNK---------KALEADVLPAWGDRLAA 157 Query: 203 ELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMV 262 ++ L + P + + R ++ ++ ++ + D + + + Sbjct: 158 DIRRKDAVEILELVAKRAPGQARNVLKAARGMYTYAVDRE----LLEYNPFTDIKISRTI 213 Query: 263 PVSAS-KADDCLQKEQLKSWFSAVRSLN-NPIASAYLQVLLLTGARREEIASLRWSDVDF 320 P D L ++++K ++A+ + L+++L+TG R E+ + +++ Sbjct: 214 PKMQPMSRDRELSEKEIKHLWNAIDEGGGSDGTKRALKLILITGQRPGEVVGMHRQEIEG 273 Query: 321 KWSSM-----RIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKII 375 KW ++ + + + + + I L+P L+ + +G++F S + Sbjct: 274 KWWTIPWQRIKTRKRRQEDHRIYLSPLAMSLI----------GDGKGFIFSDPSGENSMT 323 Query: 376 EPRSAHNRALVLA--------ELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSAL 427 E +H+ + LP + H LRR+ T + I+ I+ H + Sbjct: 324 ENALSHHVRKDIPDTVKKPYYGLPRWTPHDLRRTAATRLSRIGASDEIIDVILNHAKKGV 383 Query: 428 AEKHYRRRPLDLLRKWHEKIETWILNE 454 + + R + ++W K + Sbjct: 384 SGIYNRNKYDKEKQQWLTKWSQHLEKL 410 >UniRef50_A6VBP4 Site-specific recombinase, phage integrase family n=2 Tax=Pseudomonas RepID=A6VBP4_PSEA7 Length = 404 Score = 173 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 75/454 (16%), Positives = 131/454 (28%), Gaps = 87/454 (19%) Query: 30 RQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTIGN 88 + K T L + D V L R T +G KA+V + + + T+G Sbjct: 2 KAKLTQSLLNSLQTT--GATYEVHDTTVVGLFVRVTANGHKAYVLRW---ARGKKRTLGR 56 Query: 89 INDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQ 148 + +D AR EA + +P T T Sbjct: 57 VGVLTLDQARKEALQDLAEAREHGEPLAV----------ALGRKNSTTPTLRD------- 99 Query: 149 ELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDY 208 +I DH + A +++ L+E+T Sbjct: 100 -----------------FIDDHYSPWMDTHLKSASKTLNLINVGFAEIMSKRLTEITQRD 142 Query: 209 IAAWLST--ERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSA 266 + + N + LR + ++ + +A+ K + Sbjct: 143 LETLRISWQAAGNTDSTANRKMASLRGALS---RAVEWGFLDDHPMAR----LKQIKTDR 195 Query: 267 SKADDCLQKEQLKSWFSAVRSLNNPIASA------------------------------Y 296 + L ++ K A+ I + Sbjct: 196 AGRVRYLLPDEEKRLRQAMEDRQESIRTDRDSANQWRAERKKERLADLREVLFVDHLKPL 255 Query: 297 LQVLLLTGARREEIASLRWSDVDFKWSSMRIKD---KIEGERIIPLTPYVSELLNVLAQS 353 + + L TG RR E+ +L W+D+D + ++ K R IPL E L L Sbjct: 256 VLLSLNTGMRRGEVFNLTWADIDLTNKLVTVEGEGAKSGQTRHIPLN---KEALETLKGW 312 Query: 354 PNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPT 413 G+VF ++ + + L LA + H LR +F + VP Sbjct: 313 RKQHPRNTGYVFPGKDGE-RLDNVKKSWEGLLKLANVTGFRWHDLRHTFASKLVMAGVPL 371 Query: 414 GIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKI 447 V +++GH + + Y D E I Sbjct: 372 NTVRELLGHSDITMTLR-YAHLAPDSKAAAVELI 404 >UniRef50_A6Q4N1 Site-specific recombinase, phage integrase family n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q4N1_NITSB Length = 412 Score = 173 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 83/437 (18%), Positives = 148/437 (33%), Gaps = 55/437 (12%) Query: 38 LRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNINDWKIDD 96 L+ +K L D + L +G K F VYAGK TIG+ + Sbjct: 11 LQLRNAKPKEKNYKLRDGE--GLYILIKPNGRKIFRLDYVYAGKRNTYTIGDYPQISLAQ 68 Query: 97 ARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISA 156 AR ++ LI GIDP K + + L+A + T S E ++Q +S Sbjct: 69 ARKIKYEVKELIKNGIDPNRYKQEQK-RIKELEANKKFT----SFVIERFIQHKAKEVSK 123 Query: 157 KTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWL--- 213 + A++I + + + E+T I + Sbjct: 124 ARLQKNYINTFANYIT---------------------PFIGEVKIDEVTKQDIIKIVKNT 162 Query: 214 -------STERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSA 266 + YRLL++ ++ + Q + A ++ ++P Sbjct: 163 YSTKLQKDNRSTGKTYKAREVYRLLKSLFDFAIHNDYTQT----NPAVGIDIDSLIPKHK 218 Query: 267 SKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMR 326 + E++K + + SL NP LQ + LT R +A+L+W DF + Sbjct: 219 PTRHKAVTNERIKEIYQKICSLQNPYFRLPLQYIALTAVRFGNVANLKWDYKDFDKRVII 278 Query: 327 IK----DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHN 382 IPLT ++ V+ Q+ VF S + K I + Sbjct: 279 YPAEAMKTKNQPFRIPLTD---AIVKVIQQAKAIASPYSEIVFGSPINAHKPISDNTLRK 335 Query: 383 RALVLAELPHISLHGLRRSFGTLAE----WVEVPTGIVAQIMGHKPSA-LAEKHYRRRPL 437 + P LHG R SF T+A + + H + + + + R L Sbjct: 336 VLKIDLNEPEQDLHGFRSSFETIALEHQKEHGCSFEAIEAQLHHNIGSKVTQSYLRSDFL 395 Query: 438 DLLRKWHEKIETWILNE 454 + ++ ++ ++ Sbjct: 396 EDRKELLNWWANYLNSQ 412 >UniRef50_A1AQ50 Phage integrase family protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AQ50_PELPD Length = 427 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 62/452 (13%), Positives = 149/452 (32%), Gaps = 84/452 (18%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTI--G 87 +FT + + + + W + + R SG KA+ F + G+ M + G Sbjct: 5 TRFTDKFIMSLKPADKE----YWKREGQGFSIRVYPSGEKAWYFIYTFDGRKKYMRLKDG 60 Query: 88 NINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYL 147 D + DAR + + GIDP + + + ++++ Sbjct: 61 GYPDVSLADAREAFDIAKVKLKNGIDPLAELEQARLDRKH------------TPFVKEFV 108 Query: 148 QELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPD 207 E + R + + + + L+++ Sbjct: 109 DEFIRIYCKENNRGWKE-------------------IERALKSEIVPRWGKRKLTDIKRR 149 Query: 208 YIAAWLSTERQNR-PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSA 266 + L ++ P + R W+ + + + + P Sbjct: 150 DLVLVLDEIKERGAPVMANRILAYTRKMFSWALERAALE--------VNPFLMMSRPNDE 201 Query: 267 SKADDCLQKEQLKSWFSAVRSL-NNPIASAYLQVLLLTGARREEIASLRWSDVDFKWS-S 324 + + L ++++K+++ + + L+++L+TG R EI + +++D +W Sbjct: 202 TSRERVLSEKEIKTFWHNLDECKMSDSIKRALKLILVTGQRPGEIIGMHRNEIDGEWWEI 261 Query: 325 MRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIE-------- 376 + K + + LT +L+ + G++F S + K E Sbjct: 262 PAARSKNKQAHRVFLTITAKQLI----------GDASGFIFESPANPAKPDETPPKPAKP 311 Query: 377 --------------PRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGH 422 P + H++ + ++PH + H LRR+ T +E+ ++ ++ H Sbjct: 312 YEVRTMTHDIKQNLPHTPHSKVIDRLKVPHFTPHDLRRTAATRWAEMEITGDMIDRLQNH 371 Query: 423 ---KPSALAEKHYRRRPLDLLRKWHEKIETWI 451 + + + R ++ E E + Sbjct: 372 ITRQKQGVGHVYNRYSYAREKQQALEAWEQKL 403 >UniRef50_D2LKM4 Integrase family protein n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LKM4_RHOVA Length = 423 Score = 172 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 84/440 (19%), Positives = 151/440 (34%), Gaps = 58/440 (13%) Query: 36 ERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNINDWKI 94 L L +K+ + D + L SGAK+FV + + ++T+G+ +D + Sbjct: 6 SSLSVTALKPKEKRYEVSDMET-GLGVVVQPSGAKSFVVRYRLGKRLGKVTLGSASDITL 64 Query: 95 DDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGI 154 AR +AR+ L+ GIDP A+ K +A + AE + F + EDY+ R + Sbjct: 65 AAAREQARQTMALVRQGIDP--AEHRKTEKAARIAAEEERKDSLFEIVAEDYI---RRHV 119 Query: 155 SAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLS 214 S R + H+ + + + +T I Sbjct: 120 STLKGGHEVERLLRKHV---------------------IPAWKGRRIETITKRDILKVTD 158 Query: 215 -TERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCL 273 Q H + +RA W+ + L + P S D L Sbjct: 159 PIIEQGHGRTANHVFAWMRALFSWALERDLPG------LEHSPFDKLKAPAPKSSRDRVL 212 Query: 274 QKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDV------DFKWSSMRI 327 + +L+ ++L P ++++L+ T RR E+A W++ D +W Sbjct: 213 SEAELRLVLRGSQTLETPW-REFVRLLVYTATRRNEVACAPWAEFTGLNTADPRWEIPGA 271 Query: 328 KDKIEGERIIPLTPYVSELLNVLAQSPNSD----VNKEGWV--FRSNSKSGKIIEPRSAH 381 + K ++PL + +L + + V E V F + A Sbjct: 272 RTKNGRPLLLPLPLDAARMLAEMPRIGEKGLAFTVTGETPVMGFSDAKERLDAAMLAIAR 331 Query: 382 NRALVLAE-------LPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSA---LAEKH 431 A E LP + H LRR+ T + V ++ ++ H A +A + Sbjct: 332 KEAAERGEDPEKVLPLPRWTWHDLRRTTATGMAGLGVQPHVIEAVLNHVSGAKAGVAGIY 391 Query: 432 YRRRPLDLLRKWHEKIETWI 451 R L + + Sbjct: 392 NRHAYLAEKKAALAIWAKHV 411 >UniRef50_B5YIK4 Site specific recombinase n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIK4_THEYD Length = 345 Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 87/252 (34%), Gaps = 15/252 (5%) Query: 198 NLPLSELTPDYIAAWLSTERQNR-PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDY 256 +P++++T I + R P ++ ++ + Y+ + + Sbjct: 91 KIPINQITTRDIELLQGDLLKGRTPASVNRIIATIKHSLRKA-----YEWELTEEETLKR 145 Query: 257 NVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWS 316 R + L E+ P + L TG R+ EI SL WS Sbjct: 146 VQRVKPLKGEVQRLRFLSLEECHKLIEVAE----PHLKPIIITALNTGMRKGEILSLTWS 201 Query: 317 DVDFKWSSMRIKDKIEGERI-IPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKII 375 +D K + ++ GER IP+ + L L ++ D +VF + ++ Sbjct: 202 QIDLKHGFIHLEKTKNGERRDIPMNDTLKILFRDLIKNRRLD---SDYVFLNPETGKRLT 258 Query: 376 EPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRR 435 + + + A A + H LR +F + V V +++GHK + K Y Sbjct: 259 DIKRSFRTACKRAGITDFRFHDLRHTFASHLIMNGVDLKTVQELLGHKTIKMTLK-YSHL 317 Query: 436 PLDLLRKWHEKI 447 K + Sbjct: 318 SKAHKEKAVNTL 329 >UniRef50_B2UB26 Integrase family protein n=2 Tax=Ralstonia RepID=B2UB26_RALPJ Length = 415 Score = 171 bits (432), Expect = 6e-41, Method: Composition-based stats. Identities = 69/449 (15%), Positives = 161/449 (35%), Gaps = 50/449 (11%) Query: 21 NWSRKMALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGK 80 +++ K+ +R + + + L +G G+KA+ +Q + +GK Sbjct: 3 HFNYKLTPTRINNAKPKEQPYKLTDGGGL----------FVLVHPGGSKAWRYQYMLSGK 52 Query: 81 TLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFS 140 + IG+ + + DAR + +++ G DP + AE ++ ++ + F Sbjct: 53 RRSVLIGSYPEIGVSDARDRHAEYRAMVEQGTDPAEHRRQDKAERKAKESLQEDEGL-FK 111 Query: 141 VAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLP 200 ++ E + + +R + Sbjct: 112 AFSLKWIDERLATKTEGYRSQIKSRL----------------------ERFVWPVIGRKA 149 Query: 201 LSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRK 260 L ++ P ++ + R P +++ ++ + ++ + A +R Sbjct: 150 LEDVKPSHLLEIIEARRAT-PNTAEGVRVIIQQIYNYAIQKL----LVESNPAV--PLRG 202 Query: 261 MVPVSASKADDCLQKEQLKSWFSAV-RSLNNPIASAYLQVLLLTGARREEIASLRWSDVD 319 ++ V ++ L + +L +++ A+ R +P +A ++L+ + R+ E+ +W++ D Sbjct: 203 VITVPKAEHHRHLSESELGAFWRALGRQGAHPATTAAARLLVYSMCRKSEVLRAKWAEFD 262 Query: 320 FK---WSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIE 376 W + K + L+ ELL ++ V +V S + + Sbjct: 263 LDKAQWDIPAERMKSRRPHRVYLSRQAIELLEIMRAISGDGV----YVLPSVKIASVPLA 318 Query: 377 PRSAHNRALVLA-ELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRR 435 + ++ L +P S HG R + TL +V ++ H + Y Sbjct: 319 EATLNHLFKRLDFGVPEFSPHGTRGTAATLLREHGFSRDVVELLLAHTERSQTAASYHHH 378 Query: 436 PLD-LLRKWHEKIETWILNEAGITIKNNV 463 L+ RK + + I +A I+ NV Sbjct: 379 ELEAERRKALQYLADEIDRQAAISAAGNV 407 >UniRef50_A5W5R9 Phage integrase family protein n=2 Tax=Pseudomonas RepID=A5W5R9_PSEP1 Length = 393 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 69/420 (16%), Positives = 143/420 (34%), Gaps = 46/420 (10%) Query: 45 EGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARR 103 +K L D+ L +G K++ F+ + GK R+++G + + +ARA Sbjct: 13 PREKGYTLADS--LGLTLYVAETGVKSWHFRFTWLGKQARISLGTYPEIGLKEARARRDE 70 Query: 104 LQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYS 163 + + G DPR ++ K E + TF +E++L+ + G++ T + S Sbjct: 71 AREDVAQGKDPRESRREKKVERLGAKER------TFRRVYEEWLEFRKGGLTESTVKVIS 124 Query: 164 TRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLST-ERQNRPT 222 D L + + + + + ER+ T Sbjct: 125 NAMELD----------------------VLPAFGLRQIDSIKRADVITLIRRIERRGSIT 162 Query: 223 VTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWF 282 + + +++ G+I + + + L ++ + Sbjct: 163 TAVKTRQWIGQVFRYAVAI----GMIEINPTAEMHAVTEKMAPHKNRP-FLAFTEMPAII 217 Query: 283 SAVRSLNNPI-ASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIK---DKIEGERIIP 338 A+ + + ++L+LT R E+ WS++D ++ I K+ + ++P Sbjct: 218 KAIEESQSGLQLQCATKLLILTACRPAEVRKAEWSEIDLDTATWSIPASKMKMRRDHVVP 277 Query: 339 LTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGL 398 L+ ELL + +VF + + + + I A N S HG Sbjct: 278 LSRQAVELLRSML----PISGGLKYVFPNRTDAVRPIGINYAVNLLDRCGYTGRQSPHGF 333 Query: 399 RRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRR-PLDLLRKWHEKIETWILNEAGI 457 R F T + + + H S+ Y L+ R + +L A + Sbjct: 334 RHLFSTEMNSRGYNKDWIERQLAHADSSAIRDVYNHATYLEQRRDMMQAWADLVLPSAAL 393 >UniRef50_Q1R2C9 Integrase-like protein n=9 Tax=root RepID=Q1R2C9_ECOUT Length = 404 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 90/428 (21%), Positives = 160/428 (37%), Gaps = 58/428 (13%) Query: 43 LPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEA 101 + ++ L +D L+ R + G F ++ +AGK R+ IG + +AR E Sbjct: 11 VVGKERDKVLVKSDRDGLSVRVSPKGRVVFQYRYQWAGKGERLDIGTYPATGLKEAREEV 70 Query: 102 RRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRP 161 RL+ +++ +PR+ K ++ K K T ++ E ++ K K+ Sbjct: 71 IRLRGELESNRNPRLVK------------QAEKRKATEAMTVESVIRAWYEAYCVKNKKG 118 Query: 162 YSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNL--PLSELTPDYIAAWLSTERQN 219 + ++L S K G P A L L + PLS TP L +Q Sbjct: 119 SEQILRSFELHLFS------KIGNIPHDAATLHDWLEVLEPLSTKTPAIADRLLINAKQA 172 Query: 220 RPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLK 279 W+ +K + D+ K + + + L +++K Sbjct: 173 HV---------------WAYKRKLIETRPLSDIT-----GKDMDIRKGQKKRFLTHDEIK 212 Query: 280 SWFSAVR-SLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERII- 337 ++A+ S P A++++LL G R E+ + R D DF + + I Sbjct: 213 ILYAAIDGSRMVPKYRAFIKLLLHFGCRSSELITARVDDFDFINKVWTVPPERHKTGEIT 272 Query: 338 --PLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIE------PRSAHNRALVLAE 389 PL + E + L + S N +F + P + A Sbjct: 273 GEPLKRPIIEPVEELIKYAISMNNGSDMLFTKEGSREPVGRTSLQSLPYNLMQYAWRRLG 332 Query: 390 --LPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRK----W 443 PH SLH LRR+ T + P I ++GHK + + + + L+ RK W Sbjct: 333 YQFPHWSLHDLRRTARTNFSDLTAP-HIAEIMLGHKLPGVWQVYDKSDYLEEQRKAYQAW 391 Query: 444 HEKIETWI 451 E++E+ + Sbjct: 392 WERVESIV 399 >UniRef50_A1AN30 Phage integrase family protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AN30_PELPD Length = 367 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 60/331 (18%), Positives = 115/331 (34%), Gaps = 51/331 (15%) Query: 131 ESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSA 190 +K TF E YL+ + K+K R Sbjct: 60 NRKKYTTTFDQLAEKYLEYCKAQRDYKSKAGRVRRLQR---------------------- 97 Query: 191 GPLASLLNLPLSELTPDYIAAWLSTERQ------------NRPTVTAHAYRLLRAFIKWS 238 + + L ++T + + + S + A R L A Sbjct: 98 ----TFGEMRLIDITLEELERYQSARCTEAKQPKKEGGVSSGAVSPATVNRELTALKNMF 153 Query: 239 NYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQ 298 +++ G+IP + ++ ++ L ++ + + + + Sbjct: 154 TKAEQW-GLIPDSTLKTVRKVRLT-KENNRRLRFLAVAEMTALVDSC----SRGLREIVV 207 Query: 299 VLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGE-RIIPLTPYVSELLNVLAQSPNSD 357 L TG RR EI SL W VD K +RI D GE R IP+ ++++ + + +S Sbjct: 208 FALNTGCRRGEILSLTWDHVDLKHGFIRIADSKNGESRDIPINAALADMFKGVVRRIDS- 266 Query: 358 VNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVA 417 +VF + + + + + A A + + H LR +F + V V+ Sbjct: 267 ----PYVFTNPDTGTRYQDVKRSFATACRRAAIMNFHFHDLRHTFASHLVMNGVDLTTVS 322 Query: 418 QIMGHKPSALAEKHYRRRPLDLLRKWHEKIE 448 +++GHK + + Y D L+K E++ Sbjct: 323 RLLGHKSLTMTLR-YSHLAPDHLKKAVERLT 352 >UniRef50_Q07JG4 Phage integrase family protein n=4 Tax=Bradyrhizobiaceae RepID=Q07JG4_RHOP5 Length = 409 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 81/440 (18%), Positives = 138/440 (31%), Gaps = 69/440 (15%) Query: 38 LRRFTLPEGKKQTFLWDA----DVTTLACRATSGAKAFVFQSVYAGKTLRMTIGNIND-W 92 + T+ +WD V R GA +V + G+ TIG W Sbjct: 3 ITLRTVQSLGPGETIWDTGHREAVRGFGVRRQRGAPVYVVKYRAFGRQRFFTIGPHGSPW 62 Query: 93 KIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRT 152 + AR EA+RL L+ G DP + EA T + YL+ + Sbjct: 63 TPERARKEAKRLLGLVADGKDPADQRTQAALEAAD----------TLRKITDQYLKHAKQ 112 Query: 153 GISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAW 212 KT I L + ++A Sbjct: 113 KQRPKTYSEVERYLITSWKPLHPVSVFL-----------------------IRRRHVATR 149 Query: 213 LSTE-RQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADD 271 ++ + A A L A W+ + IP + N P + Sbjct: 150 VAEMASDHGAVTAARARAALSAMFNWAIREGLD---IPSNPVIGTN----RPTEPKSRER 202 Query: 272 CLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFK---WSSMRIK 328 L +L ++A+ + +++L+LT RREE+ +RW+++D W+ + Sbjct: 203 VLTDIELGQIWAALGDDD---YGRIVKLLILTAQRREEVGGMRWTELDHDTNVWTLPSTR 259 Query: 329 DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWV-------FRSNSKSGKIIEPRSAH 381 K E +PLT L+ S F SKS +++ Sbjct: 260 TKNHREHRVPLTEAAIALIPTPQTSREHVFGAGPRRKGDCHRGFSGWSKSKCVLDAHLFA 319 Query: 382 NRALVLAE------LPHISLHGLRRSFGTLAE-WVEVPTGIVAQIMGHK---PSALAEKH 431 R + +P LH LRR+ T + V I+ ++ H + +A + Sbjct: 320 ARRETVEGSTETKPIPDWRLHDLRRTAATTMADRLGVLPHIIEAVLNHVGGHRAGVAGVY 379 Query: 432 YRRRPLDLLRKWHEKIETWI 451 R +R + + Sbjct: 380 NLARYETEMRAALKSWADHV 399 >UniRef50_Q083S5 Phage integrase family protein n=3 Tax=Shewanella RepID=Q083S5_SHEFN Length = 403 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 61/409 (14%), Positives = 140/409 (34%), Gaps = 49/409 (11%) Query: 55 ADVTTLACRATS-GAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGID 113 AD L+ R ++ G + ++ + R+T+G D K+ +AR L+ + D Sbjct: 23 ADRDGLSVRISNAGTITWQYRFRFRSSVGRLTLGRYPDVKLSEARKFVPELRNALANDTD 82 Query: 114 PRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINL 173 PR+ Q +R+ KV E +L + + + T Y + + Sbjct: 83 PRVY---------WKQRNTRRGKVNVRYCCEQFLLKQGSSLKPGTIATYQSCF------- 126 Query: 174 SSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRA 233 + + + ++T + + + + + L+ Sbjct: 127 ---------------RVHLFDAFDDRLVDDITLGEWIDFFDEKSKVSRVTSGAILKQLKT 171 Query: 234 FIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVR-SLNNPI 292 + WS ++ + + L + +++ L + + + + Sbjct: 172 ILNWSVRRQLIKSVDVLQLRVSD-----IGSASTVGSRVLTVLECGRIWRELDKTRATRT 226 Query: 293 ASAYLQVLLLTGARREEIASLRWSDVDFK---WSSMRIKDKIEGERIIPLTPYVSELLNV 349 + ++ ++TGAR E+ +D D W+ I K P++P + ELL Sbjct: 227 ITNSIKACMMTGARVSELLKSSRADFDLDSMVWTVPVINSKTNQPIRRPISPALLELLQ- 285 Query: 350 LAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHN---RALVLAELPHISLHGLRRSFGTLA 406 +++ W F + + + + S + ++P LH RR+ T Sbjct: 286 ----EQWSLHRSQWTFPAPNDFKRPVGIASVNKLVREIRPRVDIPDWRLHDFRRTISTRL 341 Query: 407 EWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWILNEA 455 + V + +++GH + + + LD ++ +L A Sbjct: 342 SELGVLPHVTEKMLGHVLGGVMAVYNKHDWLDEQAAAYQMWTEKLLLSA 390 >UniRef50_Q3JXH9 Integrase or site-specific recombinase n=24 Tax=cellular organisms RepID=Q3JXH9_BURP1 Length = 414 Score = 169 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 78/436 (17%), Positives = 154/436 (35%), Gaps = 50/436 (11%) Query: 27 ALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTL-RM 84 A+ + R L + + D L TSG+K + ++ GK + Sbjct: 5 AMPKISTPLNDTRIKALKPKAARYTVSDGG--GLVLEVMTSGSKFWRYRYSLHGKQQPVV 62 Query: 85 TIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWE 144 TIG + AR ARR ++ G+ P +SL T E Sbjct: 63 TIGEYPAVSLTAARERARRYAEIVAGGVSPVADARKDRGAVKSLD--------TIHEFAE 114 Query: 145 DYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSEL 204 ++++ G SA+ R D ++ +S++ Sbjct: 115 YWIEQQMMGKSAEYLRTTRRALEKD----------------------IYPAIGGKSVSDV 152 Query: 205 TPDYIAAWLSTERQNRPTVTAHAYR-LLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVP 263 TP + A ++ A + R +L+ +++ ++ ++ + AQ R + Sbjct: 153 TPGDVLAICDRIKKRGAPKMALSTRNILKRIYEYAIARQ----LVTSNPAQAIVARFV-- 206 Query: 264 VSASKADDCLQKEQLKSWFSAVRSLNNPI-ASAYLQVLLLTGARREEIASLRWSDVDFKW 322 + + D L ++ AV + + + +L+LT R+ E+ RW + D Sbjct: 207 ATQASRDRVLSPNEIGRVLRAVYASSIRRPLKLAIHLLVLTMVRKSELIEARWDEFDLDA 266 Query: 323 SSMRI---KDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRS 379 S RI + K + E + L P +L L + S +VF S+ + + I + Sbjct: 267 SIWRIPAERMKKDREHWVYLAPQAVAMLRELHATRTS----HQYVFPSSRGADRPIAKST 322 Query: 380 AHNRALVLA-ELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLD 438 + L ++ H LH RR+ T + P+ + + + H + + R D Sbjct: 323 LNQAVRALDMDVQHFVLHDFRRTASTHLHEMGQPSDAIEKALAHSIKGIKGVYNRAEYAD 382 Query: 439 LLRKWHEKIETWILNE 454 R+ ++ + Sbjct: 383 ERRRITALWADFVDAQ 398 >UniRef50_C5DAW2 Integrase family protein n=7 Tax=Bacillaceae RepID=C5DAW2_GEOSW Length = 301 Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 62/263 (23%), Positives = 110/263 (41%), Gaps = 26/263 (9%) Query: 198 NLPLSELTPDYIAAWLS---TERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQ 254 ++ L+ +T ++ ++ T+ +P L++F K+ + Sbjct: 45 SVQLNNITKTHVRRFIQHQITKENVKPRTIYRRISCLKSFSKYCVKENLIDN-------- 96 Query: 255 DYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIA---SAYLQVLLLTGARREEIA 311 D+ + P + SK + +L+ F + N+ +A ++L TG RR EI Sbjct: 97 DFMIGIDTPKTDSKLPTYMSLSELRKLFHFLEQDNSRMAMRNHLLFKLLATTGMRRSEIV 156 Query: 312 SLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQS-PNSDVNKEGWVFRSNSK 370 L W +D +++RI K + ER++PL P V L+ +S ++ VF +K Sbjct: 157 ELTWEQIDLSNNTIRIYGKGKKERLLPLHPMVVPLMKSYMESLEEYQLHPSQPVFL--NK 214 Query: 371 SGKIIEPR---SAHNRALVLAELP--HISLHGLRRSFGTLAEW---VEVPTGIVAQIMGH 422 +GK + PR L A LP SLH LR +F TL V V +++GH Sbjct: 215 NGKKLNPRGLHKIFKDILQKAGLPPQRFSLHHLRHTFATLLIQENKENVDLRTVQELLGH 274 Query: 423 KPSALAEKHYRRRPLDLLRKWHE 445 + + + Y + +K E Sbjct: 275 ESL-VTTQVYTHVDFEQKKKAIE 296 >UniRef50_C7LSP4 Integrase family protein n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LSP4_DESBD Length = 392 Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 67/390 (17%), Positives = 137/390 (35%), Gaps = 43/390 (11%) Query: 66 SGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEA 125 +G K + + G+ + K A EA+ Q + + + Sbjct: 23 NGEKTYYIRYRLGGRGSKEI--EEPVGKSTSAMTEAKASQARAAR-MTGQTLPNTERRTQ 79 Query: 126 ESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQ 185 E E+ + T W++Y + AK Y+ R + Sbjct: 80 EKAAQEAITGRWTVQKIWDEYDDAHKDRACAKPDASYANRLL------------------ 121 Query: 186 GPTSAGPLASLLNLPLSELTPDYIAAWLSTERQN-RPTVTAHAYRLLRAFIKWSNYQKKY 244 + ++ L L L + R+ H LL+ ++W+ Sbjct: 122 PELGEKTPSEIVTLDLERLRRNLAKTKSPRTRKTLSAQTQKHVLALLKRMLRWAADM--- 178 Query: 245 QGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTG 304 G + +++ +P ++ + + ++QL ++ A+ +N +A+ ++ LLTG Sbjct: 179 -----GHIDPPVHLKFRMPTVDNEKTEFMTEDQLSAYLKALDEESNQHCAAFFRIALLTG 233 Query: 305 ARREEIASLRWSDVDFKWSSMRIKD---KIEGERIIPLTPYVSELLNVLAQSPNSDVNKE 361 RR + ++ WSDVD + + ++ K E + IPL+P E+L + + Sbjct: 234 IRRTALLNVMWSDVDLENGFLTLRGATAKNEKTQTIPLSPGAVEVLKGIVR------PNS 287 Query: 362 GWVFRSNSKSGKIIEPRSAHNRALVLAELP-HISL-HGLRRSFGTLAEWVEVPTGIVAQI 419 +++ + G + R R A LP HGLR F + V + Sbjct: 288 PYIWPGQN-GGAREDMRRMGRRLRDKAGLPADFRPVHGLRHHFASHLASSGASLYEVGTL 346 Query: 420 MGHKPSALAEKHYRRRPLDLLRKWHEKIET 449 + H ++ ++ Y LR+ + Sbjct: 347 LTHGDLSVTKR-YAHLSDQALRRAASLADD 375 >UniRef50_B8J055 Integrase family protein n=3 Tax=Desulfovibrio RepID=B8J055_DESDA Length = 402 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 70/426 (16%), Positives = 144/426 (33%), Gaps = 53/426 (12%) Query: 32 KFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTIGNIN 90 K T ++R K D + L + +G K + + GK R++ G Sbjct: 6 KLTEIKIRNIK--PNGKIERFVDGE--GLYLETSVAGGKHWRMKYRVNGKEKRLSFGPWP 61 Query: 91 DWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQEL 150 D + +AR + + +DP K +A+ + TF +Y++ Sbjct: 62 DISLKEAREMRDEAKRQLRESLDPSAEKK---------KAKQEQAAPTFRDIALEYVEHQ 112 Query: 151 RTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIA 210 R+ +A R R D + P++ +TP I Sbjct: 113 RSVWAASHTRTVEGRLALDVY----------------------PAFGAKPIAAVTPQDIL 150 Query: 211 AWLSTERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKA 269 A L + R + K++ G++ D +D + P + + Sbjct: 151 AMLRKIEERRAFETASRVLGFCSLIFKYA----VTLGLVEADPCRDLRPA-LKPYAKGQL 205 Query: 270 DDCLQKEQLKSWFSAVRSLNNP-IASAYLQVLLLTGARREEIASLRWSDVDF---KWSSM 325 + +++ + A+ + A L LT R EI + W++++F +W+ Sbjct: 206 AAITKPKEVGALMRAIDDYKGSVVVRAALLFSALTFCRPGEIRHVEWAEINFEREEWTIP 265 Query: 326 RIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRAL 385 K K E +PL+ E+L+ + S +VF + + + + + Sbjct: 266 AEKMKGRTEHRVPLSRQALEVLHGIMPYTGS----AKYVFPTPRSNNRPLSENGVLSALR 321 Query: 386 VLA-ELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWH 444 + ++ HG R TL + + + HK + Y R + +++ Sbjct: 322 NMGYTKEQMTAHGFRSMASTLLNELGHRPDAIEAQLAHKGADKIRATYNR--AEYMKERR 379 Query: 445 EKIETW 450 ++ W Sbjct: 380 NLMQAW 385 >UniRef50_B1JZG3 Integrase family protein n=1 Tax=Burkholderia cenocepacia MC0-3 RepID=B1JZG3_BURCC Length = 429 Score = 168 bits (425), Expect = 4e-40, Method: Composition-based stats. Identities = 77/428 (17%), Positives = 144/428 (33%), Gaps = 23/428 (5%) Query: 30 RQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQ-SVYAGKTLRMTIG 87 RQKF +R ++ K D +V + T G + + + GK R +G Sbjct: 2 RQKFKIDRDFLRSIQPTGKYQEFVDFEVRGFGVKVTPTGTVTYTVRWTKPDGKQGRKVVG 61 Query: 88 NINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYL 147 + +AR AR+ +D D E + + ++ D++ Sbjct: 62 YWPNMNPGEARELARKTIRDVDKKGD------TTADVLERRRRQVEAQQIVSGHTLRDFI 115 Query: 148 QELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASL-LNLPLSELTP 206 R + + + + + G P + L+ LS T Sbjct: 116 DTRYRVWMIANNRS-GEATVTRAVRVFADFLDHPLNGFNPWMFESWRAKCLDKGLSTATT 174 Query: 207 DYIAAWLSTERQNR---PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVP 263 + A L V H R ++A + S + L + R+ Sbjct: 175 NRDLAALRGLFSRAVEWGVVAEHPMRTVKALKESSGKVRWLSDDEEDRLRIALDAREERE 234 Query: 264 VSASKADDCLQKEQLKSWFSAVRSLNN-PIASAYLQVLLLTGARREEIASLRWSDVDFKW 322 SA + + +K + +R++ + + L TG R+ E+ LRW VD + Sbjct: 235 RSARDSANVWRKARGYELLEDLRTVPFVDYLKPAVLLSLNTGMRQGELLKLRWGRVDLEN 294 Query: 323 SSMRIKD---KIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRS 379 S + + D K +R IPL L Q ++ VF +S + + + ++ Sbjct: 295 SILTVSDETAKSGKQRHIPLNDEALTALKQWRQQQ----SRFDVVFAGDSGAVR-TDVKT 349 Query: 380 AHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDL 439 A R L A++ H +R F + V V +++GH + + Y + Sbjct: 350 AWARLLKDAQIQDFRWHDMRHHFASRLVMAGVDLNTVRELLGHSDMTMTLR-YAHLAPEH 408 Query: 440 LRKWHEKI 447 K+ Sbjct: 409 KAAAVAKL 416 >UniRef50_Q2W9L7 Integrase n=1 Tax=Magnetospirillum magneticum AMB-1 RepID=Q2W9L7_MAGSA Length = 409 Score = 168 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 71/441 (16%), Positives = 148/441 (33%), Gaps = 56/441 (12%) Query: 33 FTFERLRRFTLPEGKKQTFLW----DADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTIG 87 T ++ ++ W D+ L R + SG K + + + +R TIG Sbjct: 5 LTDSVVKTLK---PERGATTWREISDSGCRGLRLRVSPSGEKVWAVKVTVGAQRVRHTIG 61 Query: 88 NINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYL 147 + +AR A G P + L A R +T ++A +Y+ Sbjct: 62 AYPAVSLGEARKRAEAYLATARDGASP-----------DELDARQRAETMTVTMAHSEYI 110 Query: 148 QELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPD 207 + +R+ + A T H+ + + + Sbjct: 111 EAMRSSLRASTI-SLKKTMFKTHVEGALGKRLIRTVRRSDVVDVV--------------- 154 Query: 208 YIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSAS 267 + P + + A ++W + G+ A+ +VR + Sbjct: 155 -----GGVSAKGFPVQANRVFSEVMALLRWCEQKGYVDGV---PSARKKDVRAATGGAKE 206 Query: 268 -KADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMR 326 L + ++ + ++ + + + +L++LLLTG RR+E+ + W +VD S Sbjct: 207 LARRRVLSEGEIIAVWN-LTANMGDLTGDFLRLLLLTGQRRDEVRLMVWGEVDMDASLWT 265 Query: 327 IKD---KIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNR 383 I K +PL ++L G+V ++ SA R Sbjct: 266 IPASRYKTGYSHTVPLPKQAMDILRSRW-----VEGATGYVLAGRGENKPFNGAASAVRR 320 Query: 384 ALVLAELP-HISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRK 442 +LH +RR+ T + + ++GH P + + + + ++ R Sbjct: 321 LRKELGGKADFTLHDIRRTLRTGLARMGIDETTAEMVIGHIPQGIVKVYDQHDRMEERRT 380 Query: 443 WHEKIETWILNEAGITIKNNV 463 ++ ++ A T+ +NV Sbjct: 381 ALKRWAEYVERVA--TVGSNV 399 >UniRef50_UPI0001AEC0CD phage integrase n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC0CD Length = 395 Score = 168 bits (424), Expect = 6e-40, Method: Composition-based stats. Identities = 70/394 (17%), Positives = 128/394 (32%), Gaps = 58/394 (14%) Query: 60 LACRATSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKA 119 R SG+K+F +++ GK L+ IG+ + + AR A Sbjct: 35 FVVR-PSGSKSFYYRAKKNGKDLKRKIGDASTMSLATARLIADS------------QHSG 81 Query: 120 VKIAEAESLQAESRKTKVTFSVAWEDYLQ-ELRTGISAKTKRPYSTRYIADHINLSSRGG 178 K + S +T + +E Y + EL+ + ++ H+ Sbjct: 82 FKNESQNGVSVPSSIKSLTVNCMFELYRENELKHRRTVAGRKHALEVAYNLHVK------ 135 Query: 179 ESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWS 238 ASL + +++L + ++ A +L+A + Sbjct: 136 ---------------ASLGHRAVAQLDRKEVRSFFRELEDKGYCAHNKAVSVLKAACNYV 180 Query: 239 NYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQ 298 + I+ ++ + L ++ A+ +N + + Sbjct: 181 IDFEDAGLIL-------NPFERIKKMPGVTRSRYLTYQEAGQLMKALEYASNQDVADIYR 233 Query: 299 VLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGER---IIPLTPYVSELLNVLAQSPN 355 + L TGAR + ++ W D++ + I IPL P LL ++ Sbjct: 234 MALFTGARLTNVKTMEWKDINLSNAVWLIPATRTKTNQIYEIPLHPLAVYLLRKRQKTCP 293 Query: 356 SDVNKEGWVFRSNSKS--GKIIEPRSAHNRALVLAELPHI------SLHGLRRSFGTLAE 407 S +VF S KS G I S A+ A L H H LRR+F T Sbjct: 294 S----SHFVFPSKQKSKYGYITGGDSVWKAAIKRAGLYHDNPNIRPRPHDLRRTFATWQI 349 Query: 408 WVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLR 441 +V++ + H Y +D +R Sbjct: 350 QSGADVSVVSKALCHTSLKHTM-VYAYANIDQVR 382 >UniRef50_Q28N95 Phage integrase n=1 Tax=Jannaschia sp. CCS1 RepID=Q28N95_JANSC Length = 391 Score = 167 bits (423), Expect = 7e-40, Method: Composition-based stats. Identities = 78/432 (18%), Positives = 152/432 (35%), Gaps = 61/432 (14%) Query: 30 RQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTL------ 82 ++K T + + PE ++ ++D LA R T G K++ AG+ Sbjct: 2 KKKLTEMAVSKIA-PEAGRRLEVFDTLTPGLALRVTERGKKSWSVMYRVAGRGREGIRGP 60 Query: 83 --RMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFS 140 RMT+G + AR AR L D G DP + ++ +K + F Sbjct: 61 LRRMTLGAYPLIDLKAARERARAAIDLADRGEDPADKRKDEM---------RKKGERVFE 111 Query: 141 VAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLP 200 V +++ + K + + R + + + + P Sbjct: 112 VICARFIELHAKAHTVKWR--DTERLLDTY---------------------AVPAWRGKP 148 Query: 201 LSELTPDYIAAWLSTERQNRPTVTAHAYR-LLRAFIKWSNYQKKYQGIIPGDLAQDYNVR 259 + ++ L T A R + WS + G LA Sbjct: 149 IDQIDRAAAHELLDDIAMEHGTGAAREVRKHITKLFNWSVDR--------GLLAASPVAG 200 Query: 260 KMVPVSA-SKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDV 318 P + + L ++L++ ++A + P +++L+LT RR E+A+L + Sbjct: 201 MRRPELGYTPRERVLTMDELRAVWAAAGKMGYPF-GPMVRLLILTAQRRAEVANLERGWL 259 Query: 319 DFKWSSMRIKD---KIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKII 375 + + K + +++PL+ L+ L + N ++ + + + Sbjct: 260 LPDHQAFEVPASHYKTDRPQVVPLSAPALALVEGLPKW-----NSGDFMLSTTAGKRPVS 314 Query: 376 EPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRR 435 A R L+E+ +LH LRRS T + V + +++GH +A + R Sbjct: 315 GFSKAKARLDKLSEVEGWTLHDLRRSAATHMARLGVAQEHIERVLGHAIEGVAGTYNRYS 374 Query: 436 PLDLLRKWHEKI 447 L R + Sbjct: 375 YLPEKRAALDAW 386 >UniRef50_B9MQ70 Integrase family protein n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MQ70_ANATD Length = 325 Score = 167 bits (423), Expect = 7e-40, Method: Composition-based stats. Identities = 67/340 (19%), Positives = 120/340 (35%), Gaps = 66/340 (19%) Query: 137 VTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASL 196 +TFS + ++ + T + I HI L Sbjct: 11 LTFSQWLDIWMNQFMKIKLRPTTYSSYIQLINKHIK---------------------PKL 49 Query: 197 LNLPLSELTPDYIAAWLSTE--RQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQ 254 ++ L L+P I ++ P + + ++ + +K Q I G + Q Sbjct: 50 GHIQLQNLSPLAIQECYNSLLLENLSPKTVKNIHVIIHSALK--------QAIKCGYINQ 101 Query: 255 DYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLR 314 + + +P L EQ+ ++ A ++ + + L TG RR E+ L+ Sbjct: 102 NVSEAVALPKVERPEIKTLSSEQVTTFLQAAQTDS---LYPAFLLELYTGLRRGELLGLK 158 Query: 315 WSDVDFKWSSMRI---------------------KDKIEGERIIPLTPYVSELLNVLAQS 353 W D+DF ++ + G R+IP+ +V L L + Sbjct: 159 WDDIDFDNCTIHVKRSLVRVYDHNLKKTTLLLQPPKTKAGYRVIPIPDFVVAELKELYEE 218 Query: 354 PN------SDVNKEGWVFRSNSKSGKIIEPRSAHNR---ALVLAELPHISLHGLRRSFGT 404 + N +F + G I+PR+ + L A LP+I LH LR + T Sbjct: 219 HQRIKLSQPNFNSLNLMFVTTQ--GTPIDPRNFERKFKQLLKKANLPNIRLHDLRHTVAT 276 Query: 405 LAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWH 444 L V IV +I+GH+ + Y ++L +K Sbjct: 277 LLLQQNVHPKIVQEILGHRDISTTLDIYSHVNIELKKKAT 316 >UniRef50_B6AW56 Phage integrase, putative n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6AW56_9RHOB Length = 422 Score = 167 bits (423), Expect = 7e-40, Method: Composition-based stats. Identities = 79/415 (19%), Positives = 140/415 (33%), Gaps = 55/415 (13%) Query: 45 EGKKQTFLWDADVTTLACRATSGAK-AFVFQSVYAGKTLR-MTIGNINDWKIDDARAEAR 102 +++ +WD + + ++VF A R +TIG + +AR +A Sbjct: 14 PSEQRMTVWDDTLKGFGIIVRPSSVHSYVFSYRNAANRKRNITIGKVGTLTPTEARKQAE 73 Query: 103 RLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPY 162 + I G DP K T + ++YL+ + A + R Sbjct: 74 LYRFKIINGNDPLEEKYDPT------------KSFTVTNLIDEYLKSVAYLNKADSTRYT 121 Query: 163 STRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI---AAWLSTERQN 219 I HI R + L S T + + + Sbjct: 122 DICRIDRHIKPL-----VGNRLVSSIDMRFVEKLFRDIASGKTKRDKPSGKKFGRSTVRG 176 Query: 220 RPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQ-KEQL 278 RL RA + W ++ ++ + R + K + L E Sbjct: 177 GEGAARSTIRLFRAILSWGEKA----ALVDHNIVRA--ARNVDIGRDGKRETILDDPEAY 230 Query: 279 KSWFSAVRSLNNP------------IASAYLQVLLLTGARREEIASLRWSDVDFKWSSMR 326 + + + L++P A+ ++V++LTGAR+ EI +L W VD + + Sbjct: 231 EQLWHTLDRLSDPDQENENHAPIQQEATDAIKVIMLTGARKGEITNLLWEQVDLESGIIS 290 Query: 327 I-------KDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRS 379 I + RII L E+L+ S + G VF+S +S +I+ Sbjct: 291 IDPHLHKTGRRTGDRRIIGLPQLAIEILSSY-----SVELRAGLVFKSK-RSSDVIDLSK 344 Query: 380 AHNRALVLAELPH-ISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYR 433 R A LP + LHGLR S + + +GH+ +++ Sbjct: 345 IWRRVREEANLPPTLGLHGLRHSLASHMAMDGASASEIMTALGHRDITSTQRYIH 399 >UniRef50_B7DTD1 Integrase family protein n=2 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DTD1_9BACL Length = 379 Score = 167 bits (423), Expect = 8e-40, Method: Composition-based stats. Identities = 64/379 (16%), Positives = 134/379 (35%), Gaps = 33/379 (8%) Query: 98 RAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAK 157 R + +ID G D + K + + E+ K + ++ + + + Sbjct: 6 RKRGNKWCFVIDVGRDENGKRKQKWFSGYATKKEAEK---AMAAKLQEIVSGVYVAENND 62 Query: 158 TKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTER 217 T Y ++ D S + + + + L + LS+L P ++ A + Sbjct: 63 TVETYLRNWLED--KRSQVRPSTYRGYEWLVRVHIIPHLGGIELSDLRPQHLQALYRKLQ 120 Query: 218 QNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQ 277 ++ + + + + G++ ++A + P + E Sbjct: 121 SLDKPLSNRTILHIHLLLHEALDRAVKWGMVARNVADAVDP----PRPEVRRSIVWTPED 176 Query: 278 LKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI---------- 327 ++++ SA +A++ + ++TG R+ EI LRWS++D+ + +RI Sbjct: 177 VRAFLSANEEAEARYYAAFV-LAVMTGMRKGEILGLRWSEIDWDSAVVRINQTLTWTKQG 235 Query: 328 -----KDKIEGERIIPLTPYVSELLNVLAQSP-------NSDVNKEGWVF-RSNSKSGKI 374 R + L+P L ++ VF R N + Sbjct: 236 PILQEPKTDRSRRSVALSPETIVALRRHHALQAQERLLYGTEYKDHDLVFARPNGEPLHP 295 Query: 375 IEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRR 434 +A RAL A +P I H LR + +L V IV++ +GH + Y Sbjct: 296 RTLDNAWYRALKRANVPRIRFHDLRHTHASLLLAQGVHPKIVSERLGHSTINITLDTYSH 355 Query: 435 RPLDLLRKWHEKIETWILN 453 L ++ ++ + I + Sbjct: 356 VLPGLQKQVADRFDEVIFH 374 >UniRef50_A4YBB6 Phage integrase family protein n=8 Tax=Gammaproteobacteria RepID=A4YBB6_SHEPC Length = 420 Score = 167 bits (423), Expect = 8e-40, Method: Composition-based stats. Identities = 82/435 (18%), Positives = 152/435 (34%), Gaps = 58/435 (13%) Query: 42 TLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNINDW------KI 94 L K+ + D + L R +G +VF+ K ++++G + + Sbjct: 14 ALNPQDKEYLIPDKKIEGLNIRVRPTGTMTWVFRFQVGKKHEKISMGRYDKMKPETGMTL 73 Query: 95 DDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGI 154 + AR EA R ++ ++ +P+ + E E + TF A+ + Sbjct: 74 EQARKEAGRFRSWLENNRNPKQELLREQREQEEAK--------TFDDAFVSF-------- 117 Query: 155 SAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLS 214 D LS + S+ R P L N+ L +L + + Sbjct: 118 --------------DEKQLSKQLRGSQARAIYLRDIKPY--LGNIKLVDLRMNDLNKVFD 161 Query: 215 TERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQ 274 + A A + I +I A R + + + L Sbjct: 162 AKADKNGRRMAGAIGVCHKIINQVIKHALALNMIDKHPAPLLRARDVGGGTKITRRN-LS 220 Query: 275 KEQLKSWFSAVRSLNNPIAS-AYLQVLLLTGARREEIASLRWSDVDFKWSSMRIK----- 328 +LK +++ S A+ L LL G R + + WS+VDF + Sbjct: 221 FSELKILLTSLPSWRTDAANIRLLHFLLGCGQRISAVLEMHWSEVDFDEKLWLLPASSEE 280 Query: 329 --DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALV 386 K + R +PL+ Y L+ +L + S + V+ KI EP + + Sbjct: 281 RHTKSQESRKVPLSDY---LIKLLLEQRESVTDNWKLVWPQVGLD-KIQEPSAIRSHIKR 336 Query: 387 L--AELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDL----L 440 + L H S H LRR+F + + + + + +GH+ + + L+ L Sbjct: 337 NLPSNLEHFSPHDLRRTFISRCSEMGLDIVAIEKTVGHQLPGMLRVYNHHDYLNEQLSVL 396 Query: 441 RKWHEKIETWILNEA 455 + W EK+ET ++ Sbjct: 397 QAWGEKLETLMIENV 411 >UniRef50_B2I529 Integrase family protein n=3 Tax=Proteobacteria RepID=B2I529_XYLF2 Length = 410 Score = 167 bits (423), Expect = 8e-40, Method: Composition-based stats. Identities = 70/435 (16%), Positives = 139/435 (31%), Gaps = 56/435 (12%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNI 89 T L+ + + D L+ +G + F+ AG+ ++T+G Sbjct: 1 MPLTDTALKALK--PRDRIYSVADE--RGLSVEVYPTGGIVWRFRYRLAGRYEKLTLGKY 56 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 + +AR + +L+ G P K + A +T E + +E Sbjct: 57 PALSLRNARLKRDEAASLVAMGTSPARQKQLAKVTAADA--------MTVRDFAERFFRE 108 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 + SR + + L + + P+ E+T + I Sbjct: 109 -----------------------IQSRDRKDSTMPRRYLDKDILPFVGDKPMREVTAEEI 145 Query: 210 AAWL-STERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 + + + Q +L+ ++ G++P + +R + A Sbjct: 146 RSLIWRKKEQGFDATAGQIRGVLKRLCDYA----VTCGLMPTNPVLALPMRHV--YKAVS 199 Query: 269 ADDCLQKEQLKSWFSAV-RSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI 327 D L ++++ + AV S L ++LLT R+ E+ RW V + I Sbjct: 200 RDRALSPDEIRLFLRAVWASRIRRQFKLALHLILLTMVRKSELLLARWDHVHLDQAQWHI 259 Query: 328 K---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRA 384 K I+ L+ L L V + + +A N A Sbjct: 260 PAEHSKTGKPHIVYLSRQAVVLFEAL----RVLAGGSALVMPGSGTLTRPF-AHNALNHA 314 Query: 385 LVLA----ELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLL 440 L A + ++H LRR+ T + +V + + H + + R D Sbjct: 315 LGKAMQWQGIHAFTIHDLRRTASTWLHEHGWASDVVEKALNHSIGGVRGVYNRAEYADQR 374 Query: 441 RKWHEKIETWILNEA 455 R+ + +I + Sbjct: 375 RQMLQCWADFIEKQL 389 >UniRef50_C5SDU6 Integrase family protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SDU6_CHRVI Length = 361 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 65/374 (17%), Positives = 128/374 (34%), Gaps = 35/374 (9%) Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 + AR ++ + G R K AE + + E+ + + + E Sbjct: 10 PSGTVYKAR-----VRLIGQDGETSRTFKTRTAAERWARKFEAAALEDRAGL-----IME 59 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 + + Y T + DH + + A L +L LS++TP I Sbjct: 60 GQKHTLKDAIKRYRTEILPDHT-------ATTRPTYAQRLDYWCAELGHLRLSDVTPAKI 112 Query: 210 AAWLSTERQNRPTVTAHAY-RLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 A ++ T H Y +L + + + + + + P A+ Sbjct: 113 AGCRDELLTSKAPATVHGYLAVLASVLTTCVKRWHW-------VKESPMAHVDKPSVANG 165 Query: 269 ADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIK 328 L +++L A R+ +P + + + TGARR E+ LRW DVD + ++ Sbjct: 166 RTRFLSQDELSRLLEACRASESPDLYLAVVLAITTGARRGELLGLRWRDVDLVKDVLYLR 225 Query: 329 -----DKIEGERIIPLTPYVSELLNV----LAQSPNSDVNKEGWVFRSNSKSGKIIEPRS 379 G R + + V +L + +D+ VF S + + ++ R+ Sbjct: 226 VDNETTTKGGVRAVRIASQVKPILEARQAGYRRGKVADITGAALVFPSRVSTRQPVDLRT 285 Query: 380 AHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDL 439 AL A + H LR S + + ++GH+ + ++ Y Sbjct: 286 PFRTALRRAGIEGFRWHDLRHSAASFMAAHGASLVEIGAVLGHRSAQTTKR-YAHLAEQA 344 Query: 440 LRKWHEKIETWILN 453 + + +L Sbjct: 345 AHELVQGTADKVLG 358 >UniRef50_Q3SF40 Putative phage integrase n=5 Tax=Proteobacteria RepID=Q3SF40_THIDA Length = 440 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 59/433 (13%), Positives = 146/433 (33%), Gaps = 23/433 (5%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVY-AGKTLRMTIGN 88 + +LR + ++D L +G + + + GK + +G+ Sbjct: 1 MALSDSKLRTLKPADR----VFSESDGGGLYIEIMPTGKRRWGLKYRIPTGKQETIRLGD 56 Query: 89 INDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQ 148 + + DAR + L G+ P K ++ A + ++ Sbjct: 57 YPAYSLADARTWRDDCKALAGRGLSPMALKRGDPIPEDAAPAAKELAQFFIRNWCMKAVE 116 Query: 149 ELRTGISAKTKRPYSTRYI-ADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPD 207 + + + + + + + + + + ++ + ++++T Sbjct: 117 KAKAKEAEAKAADTVEAFAWRWYAEIVEPANSNPRNIKRILDKDAIPAIGSKQIADVTVT 176 Query: 208 YIAAWLSTERQNRPTVTAHAYR-LLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSA 266 I A + A R +L+ ++ ++K + A + + A Sbjct: 177 DILAITDKIKNRGADQMALQTRNVLKRLFAYAIAREKTT----FNPAAAIEAKFI--AQA 230 Query: 267 SKADDCLQKEQLKSWFSAV-RSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFK---W 322 D L E++ A+ +S L +L+L R+ E+ +W ++D + W Sbjct: 231 KSRDVALSPEEIGRLLRAIYQSSMKRAHKLALHLLILCMVRKSELTEAKWEELDLEKAEW 290 Query: 323 SSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHN 382 + + K + ++PL+ + L + WVF S S K I + + Sbjct: 291 AIPGERMKKDKPHLVPLSRQAVAMFEEL----KGLASGSEWVFPSRSSLKKPIAHNALNT 346 Query: 383 RALVL-AELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLR 441 L A++ +H RR+ T + + + + H+ + + R + D R Sbjct: 347 VVRALEADVRDFVIHDFRRTASTHLHEAGFNSDWIEKALAHETKGIRGVYNRAQYADQRR 406 Query: 442 KWHEKIETWILNE 454 + ++ ++ Sbjct: 407 DMLQWWADFVDSQ 419 >UniRef50_Q144A9 Putative bacteriophage integrase n=1 Tax=Burkholderia xenovorans LB400 RepID=Q144A9_BURXL Length = 444 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 74/449 (16%), Positives = 131/449 (29%), Gaps = 49/449 (10%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSV-YAGKTLRMT 85 ++R T E L + R T +GA +F ++ G+ R T Sbjct: 1 MARINLTRELLDSIRKSGSDGKHRELADIQKGFGARITPNGAISFYYRYTGSNGRHRRQT 60 Query: 86 IGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWED 145 IG + +AR A L ++ D K A + ++ Sbjct: 61 IGAYPAMTVSEARRRALELTQEVEHSNDTASEIVRKRERAHRTEHAAKVVPTIDGFIDGH 120 Query: 146 YLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 Y + LR I + ++ R G G L + + E Sbjct: 121 YGKRLRATIKTAPR------------------TITELRKLGKAFPGTLNRISVQQVLEWA 162 Query: 206 PDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRK----- 260 + + +R P LR + ++ D Sbjct: 163 YAELEKEVGEDRIMCPASVRRKLTSLRGLFSHAIRLDFITANPVAEVMDDNKALFDEGEG 222 Query: 261 ----MVPVSASKADDCLQKEQLK--------------SWFSAVRSLNNPIASAYLQVLLL 302 + P + L + + + + V L Sbjct: 223 RDQWLRPDMEIRLRAALDAREARLRKSHAQIDSDARCDIVYGPDAAYVDHVKPAVLVALG 282 Query: 303 TGARREEIASLRWSDVDFKWSSMRIKD---KIEGERIIPLTPYVSELLNVLAQSPNSDVN 359 TG RR E L+W DVDF +R++ K + R +P+ V ++L S Sbjct: 283 TGLRRGEQMQLQWPDVDFDNERIRVRKATSKGDRTRYVPMCDEVIQVLKAWKAQTCSGPV 342 Query: 360 KEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQI 419 + VF + G++ + L A++ + H LR SF T VP + + Sbjct: 343 QPILVF--GNALGEVRREIGPYRHVLAEAKIDSFTWHDLRHSFATRLAQHGVPIERIGKW 400 Query: 420 MGHKPSALAEKHYRRRPLDLLRKWHEKIE 448 +GH + Y + R ++ Sbjct: 401 LGHSSLQQTMR-YAHHCPEQQRHDIRALD 428 >UniRef50_B1I2A9 Phage integrase family protein n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I2A9_DESAP Length = 300 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 71/291 (24%), Positives = 116/291 (39%), Gaps = 18/291 (6%) Query: 165 RYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAA---WLSTERQNRP 221 RY+ + S + + P + L+ LT + WL ER+ + Sbjct: 13 RYLRAEKDASPETLAAYRSDLRPLEDFLFRERIAPELANLTTPVLRRYFIWLQEERKLKA 72 Query: 222 TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSW 281 R+F ++ Q+ IPGD + + P + L++E+LK Sbjct: 73 ASLRRKIHCFRSFFRYLAEQEY----IPGDPMR----KIRPPKEPDRVPIYLKEEELKWL 124 Query: 282 FSAVRSLNNPI---ASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIP 338 +A L P L +L G RR E+ L W DVD ++R++ K + ER+IP Sbjct: 125 LTAPGHLGGPYHLRDKLILHLLAYCGLRRSELLRLDWDDVDLGAGTLRVRGKGKRERLIP 184 Query: 339 LTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPH--ISLH 396 L P + ++L Q+ N+ ++ R + K R R + +A L I+ H Sbjct: 185 LIPELQQILWEYLQTRLPLENRALFLGREGGRMNKDALTR-LFKRYVRMAGLDPAVITPH 243 Query: 397 GLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKI 447 LR SF TL + ++MGH A + Y LR+ E+I Sbjct: 244 KLRHSFATLLLEKGTDVFTIQELMGHADLAST-RIYAHCSSKRLREAVERI 293 >UniRef50_C9RBE5 Integrase family protein n=1 Tax=Ammonifex degensii KC4 RepID=C9RBE5_AMMDK Length = 414 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 71/380 (18%), Positives = 130/380 (34%), Gaps = 48/380 (12%) Query: 103 RLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPY 162 + + D R + A + + A + T + T + Sbjct: 50 EARASLGYDADGRPVRKSFYARTREEAVKK------LTQALHQASLGVLTAPARLTLGEW 103 Query: 163 STRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPT 222 ++ + R + A L SL ++PL +TP + A ++ Sbjct: 104 LATWLETYKKGKLRPTTL-ANYETVIRAYILPSLGSVPLRSVTPASLQALYNSLSARG-- 160 Query: 223 VTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWF 282 ++A RL+ + Q G++ + A+ K+ + L +E+++++ Sbjct: 161 LSARTVRLVHVVLNACLKQAVKNGLLVRNPAEATEPPKLKRRVPVRP---LAREEVEAFL 217 Query: 283 SAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIK-------------- 328 A R + L TG RR E+ L+W DVD + +R++ Sbjct: 218 KAARG---ERLYPAFALALKTGLRRGEVLGLKWEDVDLERGVLRVRRSLVEAKDPETGKV 274 Query: 329 -------DKIEGERIIPLTPYVSELLNVLAQSPNSD-------VNKEGWVFRSNSKSGKI 374 + R +PLT V LL N + G VF ++ GK Sbjct: 275 RLVFQEPKTEKSRRTVPLTRDVVALLKSHKARQNEEKLYFGEAYEDNGLVF--CTELGKP 332 Query: 375 IEPR---SAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKH 431 I PR A + L A L H LR +F TL V +++GH+ + Sbjct: 333 IWPRNFLRAFHSVLKKAGLERHRFHALRHTFATLLLASGEELKNVQELLGHERISTTADV 392 Query: 432 YRRRPLDLLRKWHEKIETWI 451 Y D +K +++ ++ Sbjct: 393 YAEVLEDAKKKAVTRLDAFL 412 >UniRef50_B7NKE6 Integrase of prophage n=42 Tax=Enterobacteriaceae RepID=B7NKE6_ECO7I Length = 416 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 80/431 (18%), Positives = 151/431 (35%), Gaps = 48/431 (11%) Query: 32 KFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYA-GK---TLRMTI 86 K + +LR+ +K FL D L+ R TSG + F G+ R+ + Sbjct: 14 KLSDTQLRKINGTPAQKTAFLNDGG--NLSVRHSTSGLLTWYFTYRAGTGRGAPPERIKL 71 Query: 87 GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDY 146 GN D + AR +A + + + G +PR + EA VT A + Sbjct: 72 GNYPDLSLKSAREKAAQCRAWLAEGKNPRHELNYTVQEAL--------KPVTVGDALTYW 123 Query: 147 LQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTP 206 L+ Y+ D+ L R + + +PL + Sbjct: 124 LE------------SYAKENRVDYAALKKRLNNH-----------VIQHIGAMPLDKCEL 160 Query: 207 DYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSA 266 + A + P + + +K+ ++ + D++ V Sbjct: 161 RHWLACFDQVAKRTPVTAGFLLQTCKQALKFCRRRRYAISNVLDDMSVAD-----VGKKP 215 Query: 267 SKADDCLQKEQLKSWFSAVRS-LNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSM 325 ++ L ++L A+ + +P A +++L++ G R E+ S+ DF Sbjct: 216 DISERVLSTKELGELLQALDKKIFSPYYIALIRLLIVFGCRTVELRLSEISEWDFTEMLW 275 Query: 326 RIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRAL 385 + + ++ P +L + Q + + + ++ R AH R Sbjct: 276 TVPKEHSKTKVAIFRPIPEAILPFVTQLVEQNRHTGLLLGEVKQETSVSQYGRLAHRRL- 334 Query: 386 VLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHE 445 PH SLH +RR+F T+ + V +V Q+ GH+ + + R LD R + Sbjct: 335 ---NHPHWSLHDIRRTFTTMLSDLGVDPHVVEQLTGHQMPGMQRVYNHSRYLDAKRNALD 391 Query: 446 KIETWILNEAG 456 + AG Sbjct: 392 MWTERLGILAG 402 >UniRef50_C4LB72 Integrase family protein n=9 Tax=Gammaproteobacteria RepID=C4LB72_TOLAT Length = 433 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 77/442 (17%), Positives = 148/442 (33%), Gaps = 49/442 (11%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWD-ADVTT---LACRA-TSGAKAFVFQSVYAGKTLRMT 85 TF +++ + Q + WD L R TSG K F+++ GKT + Sbjct: 5 TGLTFNKIKGLK--PKETQYYEWDVTGKRGQGRLGVRVNTSGEKVFIYRYFVDGKTRFIQ 62 Query: 86 IGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWED 145 +G +D+A + R L+ G+DP+ +++ Q ++ K + E Sbjct: 63 LGLFPAMSLDEAGQKTREFAGLLKAGLDPKNE-LERMSRVREAQEKAEAEKGSIKQLIET 121 Query: 146 YLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 Y+ +++T R AD + + E+T Sbjct: 122 YIWKMKTD---------GKRTYADVLRRLEKDVYPVIPP-------------TKKAKEVT 159 Query: 206 PDYIAAWLSTERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDL-----AQDYNVR 259 I L+ Q + L A ++ + +V Sbjct: 160 SLDIKQILTNMIQRGAIVQSNRVRSYLHAAFQYGLGADLDPANNRESVLFGLTMNPVSVI 219 Query: 260 KMVPVSASKADDCLQKEQLKSWFSAVRSLNN--PIASAYLQVLLLT-GARREEIASLRWS 316 + + L E ++ + + + + L+ T G R E+A+ WS Sbjct: 220 PRQGYAEKAGQNWLSLECVQKLMAIFEDVPKVGSLPAQLLKFCFYTGGQRPYELAASEWS 279 Query: 317 DVDFKWSSMRIKD---KIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGK 373 VD++ ++ + D K + E +IPLT +L L + + N ++F Sbjct: 280 SVDWEQRTLLVIDSISKNKREHLIPLTDSALAILKELHEK---NTNGSRYIFPQKDPEKH 336 Query: 374 IIEPRSAHNRALVLAELPHISL---HGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEK 430 A P S+ +RR+ TL + + + + H + ++ + Sbjct: 337 FRTDSFAQAIIYFRKSHPDFSVFVARDVRRTCKTLMGELGITKELRDRTQNHAQNDVSSR 396 Query: 431 HYRR-RPLDLLRKWHEKIETWI 451 HY R L R+ E E + Sbjct: 397 HYDRYSYLPEKRRALEAWEARL 418 >UniRef50_B5JBP0 Site-specific recombinase, phage integrase family protein n=2 Tax=Octadecabacter antarcticus RepID=B5JBP0_9RHOB Length = 433 Score = 166 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 83/461 (18%), Positives = 158/461 (34%), Gaps = 68/461 (14%) Query: 32 KFTFER---LRRFTLPEGKKQTFLWD--ADVTTLACRATS-GAKAFVFQSVYAGKTLRMT 85 K T R + + PE ++ D R TS G KAFV GK R T Sbjct: 3 KLTSGRGGTIEKAEAPEKGQRFVFDDHRDAPRGFGLRITSAGGKAFVLAYAVEGKQRRAT 62 Query: 86 IGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWED 145 IG+ W ++ ARAEA +++ ID G DP K + E T + D Sbjct: 63 IGSWPTWTLEAARAEASQMRRNIDAGSDPLEEKRTRKIE------------PTVADLASD 110 Query: 146 YLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 +L + + G +S++ + + +L + ++++ Sbjct: 111 WLD------------------------VHATGLKSEQAIRSLIGGDLVKALGKMKVTDVR 146 Query: 206 PDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQ-----GIIPGDLAQDYNVRK 260 + + + P A R + ++ + + G+ PG + K Sbjct: 147 RRDVIEAVEAKAATAPRQAALMLSYARMLLDYATDRDIVRANPVAGLKPGSIKV---AGK 203 Query: 261 MVPVSASKADDCLQKEQLKSWFSAVRSLN-NPIASAYLQVLLLTGARREEIASLRWSDVD 319 P+ L E++KS ++ V S + + L+++L+TG R E+A + ++ Sbjct: 204 RDPLKPVVRLRVLDAEEIKSMWANVESCGLHLLTGLALKLVLVTGQRPGEVAGMHEKEIS 263 Query: 320 FKWSSMRI--KDKIEGERIIPLTPYVSELL-----NVLAQSPNSDVNKEGWVFRSNS--K 370 + ++ + K + + LT +++ + G++F S+ Sbjct: 264 GRLWTIPASRRGKTSTAQTVYLTDTALDIIAVAKAELQRLQGRRKGAPSGYIFESSYGLP 323 Query: 371 SGKIIEPRSAHNRALVLAELPH-----ISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPS 425 PR L + H LRR+ T +V I +GH Sbjct: 324 ITNAALPRGVQRSHEALGAKDDEAWGRWTPHDLRRTMRTGLSASKVAPHIAELTIGHTKR 383 Query: 426 ALAEKHYRRRPLDLLRKWHEKIETWILNEAGITIKNNVDMR 466 + + + R E +L I + D++ Sbjct: 384 GIVATYDQHTFDSERRDAMMAWEARLL---AIVAGRDPDVK 421 >UniRef50_A4F5J8 Putative uncharacterized protein n=1 Tax=uncultured bacterium RepID=A4F5J8_9BACT Length = 390 Score = 166 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 70/422 (16%), Positives = 154/422 (36%), Gaps = 59/422 (13%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIGNIN 90 T + ++ G+K + D D L+ A SG +F F Y + +T+G Sbjct: 1 MALTDKAIKALK--PGEKTYKVADRDGLYLSV-APSGTMSFRFNYRYNNRQQTVTLGKYG 57 Query: 91 DWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQEL 150 + + AR + + + + GI P K + ++ + +FSV + Y +E Sbjct: 58 EITLAQAREKLLKAKADLAAGISPAKKKQ---------EIKNTLAENSFSVWLDKYTEEC 108 Query: 151 RTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIA 210 S K R Y+ I +++ +L + L E+T + + Sbjct: 109 GVADSTKKMRGYA---IDNYLR---------------------PALGKMSLFEITENEVR 144 Query: 211 AWLSTE-RQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKA 269 A +Q P+ +++ +++ + P D + ++ Sbjct: 145 ALAEDLVKQQAPSTALLCRMIIKNVYTFASMHGGPKLKSPTDFVRPSSIHTF-----KSR 199 Query: 270 DDCLQKEQLKSWFSAVRS-LNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI- 327 + ++ + + ++ + + +++LLT R+ E+ + WS++D+ + RI Sbjct: 200 TRAMSPREIGYVLNGIEQSSSDISSKSAFKLILLTLLRKSEVINGVWSEIDWNEKTWRIP 259 Query: 328 --KDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRAL 385 + K + + L+ ++L L K ++F + K + + NR L Sbjct: 260 AERMKTKRPHNVYLSKQAFDILVCLRTLSTC---KSDFIFPAKYGLNKPMATSTP-NRLL 315 Query: 386 VLA---------ELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRP 436 L E+ ++H LRR+ TL E + + + H S + + Sbjct: 316 ELGMANAKKAGIEIEPCTIHDLRRTASTLLNEAEFNSDWIEASLAHVASGVRAVYNVADY 375 Query: 437 LD 438 + Sbjct: 376 RE 377 >UniRef50_Q1NIG8 Phage integrase n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NIG8_9DELT Length = 398 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 68/404 (16%), Positives = 137/404 (33%), Gaps = 54/404 (13%) Query: 69 KAFVFQSVYAGKTLRMTIG-NINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAES 127 + +V + GK+ IG W ++ A+ + L+ G P ++ + A Sbjct: 27 RYYVARFQIDGKSYEEPIGWASEKWTVEAAKEKLAELRKSAKAGG-PATSREARAKAAAE 85 Query: 128 LQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGP 187 ++ ++ + WE L+ ++G + Sbjct: 86 AATKTTFAQL-LAEIWERELRHKKSGKDTRRL---------------------------- 116 Query: 188 TSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGI 247 L + NLP+ + I L Q P V + L ++ + GI Sbjct: 117 LEKDCLPTWGNLPVETIRRREIVLLLDEIEQRAPIVRNRVHGALTRLFNFAAER----GI 172 Query: 248 IPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAY------LQVLL 301 I ++ ++ L +++K+ + A+ +Y L+++L Sbjct: 173 IDDSPCT-----RIRKLAEKGRKRVLTDDEIKTLWEALDPEQVQPMDSYRLTKLALRLIL 227 Query: 302 LTGARREEIASLRWSDVDFK-WSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNK 360 LTG R E+A + W ++D W+ + K +PLT E + + Sbjct: 228 LTGQRPGEVAGMTWDEIDGDTWNIPASRMKNGDPNDVPLTGLALETI----EQARQLSGD 283 Query: 361 EGWVFRSNSKSGKIIE---PRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVA 417 +VFRS + G + R+ + + H LRR+ T + V + Sbjct: 284 SPFVFRSTHRDGAMSAHALSRAIATHWQAIGFKERFTPHDLRRTMRTRLAELGVDDVVAE 343 Query: 418 QIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWILNEAGITIKN 461 + +GH+ + + R R EK E + G+ ++ Sbjct: 344 RCLGHRLQGVLAVYNRHDYAMEKRLALEKWENNLRRIVGLPVEQ 387 >UniRef50_A1V9J7 Phage integrase family protein n=1 Tax=Desulfovibrio vulgaris DP4 RepID=A1V9J7_DESVV Length = 400 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 77/421 (18%), Positives = 144/421 (34%), Gaps = 58/421 (13%) Query: 50 TFLWDADVTTLACRATSGAK-------AFVFQSVYAGKTLRMTIG-NINDWKIDDARAEA 101 T+ + + R K F+ + GK +G W + A+AE Sbjct: 2 TYKYATPAPGIRTREHPARKHGIRRDVYFMLRYTIDGKQRSEGLGWATEGWTLAKAQAEL 61 Query: 102 RRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRP 161 RL+ TG P + E E+ + + T W+ YL+ + + Sbjct: 62 FRLKEAARTGEGP--VTLAEQREQARRAREAERQRRTIGGLWDFYLEAHQERAGTPADKS 119 Query: 162 YSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNR- 220 A LA L + +L ++ A Sbjct: 120 ---------------------------RAKYLAGLFDSYPEDLRTGHVDALRRKIEAQGM 152 Query: 221 -PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLK 279 P H LLR +++ + + + + PV +K ++ L EQ + Sbjct: 153 SPQSVKHVLALLRRVLRYCEGRGLC-----SLPGRALLIFDLPPVDNAKTEN-LTHEQAR 206 Query: 280 SWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKD---KIEGERI 336 + A+ + + +A +++ LLTG RR + L+W D+DF+ + + ++ K Sbjct: 207 ALLEALDADPDQNLAAMVRLALLTGMRRGALFGLQWGDLDFRNARITLRGATAKSGKTSS 266 Query: 337 IPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPH-ISL 395 IP+T ++L + + + +VF + GK +E R NR + A LP Sbjct: 267 IPMTDDARKVLLGVQR------TESLYVFPGRN-GGKRVECRRFLNRIRLRAGLPDGFRP 319 Query: 396 -HGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWILNE 454 HGLR +F + V + ++ H ++ + R I + Sbjct: 320 LHGLRHTFASWLASSGVSLLQIKDLLTHGDYRSTTRYSAFFDHE-QRLAASLIGEHLAQA 378 Query: 455 A 455 Sbjct: 379 V 379 >UniRef50_A3D8Y1 Phage integrase family protein n=4 Tax=Shewanella RepID=A3D8Y1_SHEB5 Length = 451 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 60/429 (13%), Positives = 138/429 (32%), Gaps = 64/429 (14%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGA-KAFVFQSVYAGKTLRMTI 86 + K T +R + + D+ L + +V + +T + Sbjct: 1 MKTVKLTQVFIRSLA--RQTRTYTIQDSLCHGLGVKVMPDKPMQYVISRLIDNRTRTRIL 58 Query: 87 GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDY 146 ++ + AR +A + ++ + E+ + ++ S ++ + Sbjct: 59 APVSALTVKAAREKA--------------------TGQLQAWREENTQPSMSASPRFDVF 98 Query: 147 LQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTP 206 +++ + + +P + R + +N LA PL + Sbjct: 99 VEQTWKPMIFEHWKPSTKRSVLPALNRRL-----------------LAHFGRYPLHMINH 141 Query: 207 DYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSA 266 + AW + R L++ K + Q + Sbjct: 142 RMVQAWFDEISKTRKGAANRNLDTLQSVFKLALRQG---------HCLTNPCIGIRQNKR 192 Query: 267 SKADDCLQKEQLKSWFSAVRSLNN-----PIASAYLQVLLLTGARREEIASLRWSDVDFK 321 + L +++ A+ + L++LLLTG R EI L+ V + Sbjct: 193 RVLNRFLSVAEMQRLSVALDECEEVGGSIAQCADILRLLLLTGCRLSEITFLKGEYV--R 250 Query: 322 WSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAH 381 + + + D G +++ + ++L+ N++ +F + + +S Sbjct: 251 GNELHLPDSKTGAKVLYIGQAAVDILSRYHCKANTE------LFPMKQGASTSL-VQSLW 303 Query: 382 NRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLR 441 R + + LH LR +F + A +VA ++GHK + + Y D + Sbjct: 304 LRLRKQIGIEDVRLHDLRHTFASYAVMDGCSIPMVASLLGHKKVTMTLR-YTHVGDDSVE 362 Query: 442 KWHEKIETW 450 + E I Sbjct: 363 QAAEVIGAV 371 >UniRef50_A6FWH8 Site-specific recombinase XerD-like protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FWH8_9RHOB Length = 316 Score = 165 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 54/307 (17%), Positives = 106/307 (34%), Gaps = 16/307 (5%) Query: 148 QELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPD 207 + T + H+ ++ R A L + L ELT Sbjct: 13 DNSSRSVERVTLSRFFDEQFFPHVRVTKRHFHHDWSIFNTHVR---AQLGHYHLDELTNP 69 Query: 208 YIAAWLSTERQNR--PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVS 265 + W+ + + + L+ + + ++ ++P ++++ V Sbjct: 70 VLDVWVREQVVSGLQRSTINKHIYLMNRMLNLA----RHWCLVPAQNPDQQPLKRL--VV 123 Query: 266 ASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSM 325 L ++++ +A R ++P ++Q+LLLTGAR+ E + W DVD Sbjct: 124 GDYKQRFLSADEIQRLIAACRRSSHPYLHHFVQILLLTGARKGEARTALWRDVDLDKRIW 183 Query: 326 RIKDKIEGE-RIIPLTPYVSE---LLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAH 381 + G R I L + + A+ +VF + +A Sbjct: 184 TVPRSKNGRSRRILLNTNAVDSFNAIRRTAERLQQPTLPTSFVFTNPRTGRAYDSFYAAW 243 Query: 382 NRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLR 441 A A+L + +H LR +F +L V V ++GH + ++ Y D L Sbjct: 244 YVARDQAKLEDVRIHDLRHTFASLLINKGVSLYEVQTLLGHSSVQMTQR-YAHLAPDRLH 302 Query: 442 KWHEKIE 448 E + Sbjct: 303 SRAEIVS 309 >UniRef50_C6MS46 Integrase family protein n=1 Tax=Geobacter sp. M18 RepID=C6MS46_9DELT Length = 356 Score = 165 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 57/329 (17%), Positives = 108/329 (32%), Gaps = 21/329 (6%) Query: 115 RIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLS 174 R+ +K +S E + ++ E ++E R + + K+ + ++ Sbjct: 17 RVLVRLKGYPPQSATFERKTDAKKWAQQTEAAIREGRHFKTREAKKHTVAEMVDKYVKTV 76 Query: 175 SRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQ--------NRPTVTAH 226 K Q + L+++TP I P T Sbjct: 77 LPTKPKSKDTQEGQLLWWKDEIGLYTLADVTPAMIGECRDKLLAGKTKGGGLRSPATTVR 136 Query: 227 AYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK-ADDCLQKEQLKSWFSAV 285 L + + + +D +RK+ + L ++ A Sbjct: 137 YMAALSHAFSVAVNEWGW--------VEDSPMRKVKKPKEPRGRVRFLTDDERNRLLEAA 188 Query: 286 RSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERI-IPLTPYVS 344 + N + + L TG R EI +L+W D+D K + + D GER +P+ Sbjct: 189 KRSCNNCLYPVVLLALSTGMRFSEIMNLKWKDIDLKRKCLILHDTKNGERRNVPVVNLAH 248 Query: 345 ELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGT 404 +L ++ VF S S R + A+ A L H LR S + Sbjct: 249 SVLTERSKVRR---LGTELVFPSISDPTMPSNLRKSWAAAVRDANLEDFRFHDLRHSAAS 305 Query: 405 LAEWVEVPTGIVAQIMGHKPSALAEKHYR 433 +A+++GHK A+ +++ Sbjct: 306 YLAMNGATLAEIAEVLGHKTLAMVKRYAH 334 >UniRef50_A0LL76 Phage integrase family protein n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LL76_SYNFM Length = 381 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 74/400 (18%), Positives = 137/400 (34%), Gaps = 58/400 (14%) Query: 69 KAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESL 128 + + + GK + G + ARA R + R+ E Sbjct: 28 RIYYIRYRRGGKLIEEKAGRQFRDDMSAARAAGIRAK---------RMEGDQPTNEERRE 78 Query: 129 QAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPT 188 K + T + WE+Y + G + HI Sbjct: 79 AEREVKERWTITRLWEEY----KRGTPGLKGIVTDENRFSKHIK---------------- 118 Query: 189 SAGPLASLLNLPLSELTPDYIAAWLSTERQN-RPTVTAHAYRLLRAFIKWSNYQKKYQGI 247 + EL P + + +P +A LLR + + ++ Sbjct: 119 -----PIFGDKEPGELVPLDVDRLRVKMLKTHKPATVRNALELLRRIVNFGVRKQ----- 168 Query: 248 IPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARR 307 L + + +P ++ + L ++L A+ N + +++ L TG RR Sbjct: 169 ----LCPCLSFQIPMPRVRNEKTEDLTPDELARLLKALSEEPNTQVAHIVKLALFTGMRR 224 Query: 308 EEIASLRWSDVDFKWSSMRIKDKIEG-ERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFR 366 EI LRW+D+D + I+D G ++ IPL+ +L ++ +VF Sbjct: 225 GEILKLRWTDIDLDRGFISIRDPKGGVDQRIPLSESARRILANHPKT------DSLFVFP 278 Query: 367 SNSKSGKIIEPRSAHNRALVLAELP-HIS-LHGLRRSFGTLAEWVE-VPTGIVAQIMGHK 423 + + + + + NR AELP LHGLR +F + V + +++ HK Sbjct: 279 GRNGAQR-TDINKSLNRIKEAAELPKDFRMLHGLRHAFASSLASSGEVDMYTLQKLLTHK 337 Query: 424 PSALAEKHYRRRPLDLLRKWHEKIETWILNEAGITIKNNV 463 + + Y + LR+ + I + K+NV Sbjct: 338 SPTMTAR-YAHLRDESLRRASDLAGEIIEKA--VKKKDNV 374 >UniRef50_A4VPC8 Site-specific recombinase, phage integrase family n=6 Tax=Proteobacteria RepID=A4VPC8_PSEU5 Length = 455 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 75/437 (17%), Positives = 147/437 (33%), Gaps = 46/437 (10%) Query: 22 WSRKMALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGK 80 WS + T +++ + L D L +G K + ++ GK Sbjct: 49 WS--PTMPENLLTDAKIKSVK--PTDRDWKLSDGG--GLFLLVKPTGCKLWRWKYRLQGK 102 Query: 81 TLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEA-ESLQAESRKTKVTF 139 IG+ + +AR + + L+ GI P + E+L R + +F Sbjct: 103 ENLFAIGSFPQVSLAEARTAREKARALVKQGIHPAHERQQVKQRNLEALAERKRARESSF 162 Query: 140 SVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNL 199 + + YL E++ + + R +R + Sbjct: 163 AKVAQAYLTEIKPVFAYSSYRTKESR----------------------IRKYLSPKFDGM 200 Query: 200 PLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVR 259 P+S++ I L + + H L A +++ +G++ + Sbjct: 201 PMSDIGVKQIRPLLEECKTHGAWAAIHVKGDLSAIFEFA----VVRGLVEANPIPSLRGL 256 Query: 260 KMVPVSASKADDCLQKEQLKSWFSAVRSL-NNPIASAYLQVLLLTGARREEIASLRWSDV 318 P S SKA + +EQ++ ++ A+R P + L+++ LT R E A W + Sbjct: 257 LRAPASESKA--AMTREQIQKFYQALRGYRGYPETALCLRLIALTACRPGEAADAEWEEF 314 Query: 319 DFK---WSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKII 375 DF+ W K K + I PL+ +L L + ++F S G Sbjct: 315 DFEDAVWRRPAAKMKARRDHISPLSTQAIAVLKGLQRI----TGGGRYLFPHRSGKG-FT 369 Query: 376 EPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGH-KPSALAEKHYRR 434 P + + H R +F T A + + + H + + + + + Sbjct: 370 TPNRLTYAMRDMNLGRGTTPHCWRTTFSTWANENGFRPDAIERQLAHVESNKVRATYNKA 429 Query: 435 RPLDLLRKWHEKIETWI 451 LD R + ++ Sbjct: 430 LLLDQRRSLLQAWAGYL 446 >UniRef50_A1AE42 Integrase-like protein n=11 Tax=root RepID=A1AE42_ECOK1 Length = 418 Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats. Identities = 73/442 (16%), Positives = 153/442 (34%), Gaps = 66/442 (14%) Query: 33 FTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNIND 91 T +L+ K + D D L TSG +F + G+ + IG Sbjct: 2 LTDTKLKNLK--PQDKLYKVSDRD--GLYVAVLTSGTVSFRYDYRINGRRETLVIGQYGR 57 Query: 92 --WKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 + +AR E + L+ G P AK I + + TF+V + Y++ Sbjct: 58 DGISLAEAREELIAAKKLLKAGQSPAAAKRDGI--------KKIRGAETFAVHTDSYMKH 109 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 + S + + Q L L N ++E+T + Sbjct: 110 VILADSTRAMK------------------------QAVIDRDILPVLGNKMMAEITTSMV 145 Query: 210 AAWLSTE-RQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 + A ++ + + +N + + P + ++ P Sbjct: 146 RDLCDRIVERGGRATAVQAREIISSVYRHANDRG-HGLFNPAADIKPSSIAIFKP----- 199 Query: 269 ADDCLQKEQLKSWFSAVRSLNN-PIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI 327 + L E++ +F + ++ L+++L+T R+ E + W ++DFK + I Sbjct: 200 RERTLTPEEIGLFFRTLDAIGAMGTMKMALKLVLITMVRKGEFTNATWDEIDFKKWTWTI 259 Query: 328 ---KDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEP---RSAH 381 + K +I L ++L L ++ K + S Sbjct: 260 PSDRMKGSRAHVIYLPKQAQDILVGLQMC----AGGSEYLVPGRYNFRKPLSNAALNSLI 315 Query: 382 NRALVLAE-----LPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKH----Y 432 +R + + + ++H +RR+ TL P+ + + + H+ + + Y Sbjct: 316 DRTVKIINEDGEHIQDFTVHDMRRTASTLLHEAGYPSDWIEKALAHEQKGVRAVYNKAEY 375 Query: 433 RRRPLDLLRKWHEKIETWILNE 454 R+ +L++W + I++WI E Sbjct: 376 ARQRAYMLQQWADMIDSWINGE 397 >UniRef50_A8UUR8 Phage integrase family protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UUR8_9AQUI Length = 351 Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats. Identities = 72/390 (18%), Positives = 131/390 (33%), Gaps = 61/390 (15%) Query: 66 SGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEA 125 K F F+ +Y G+ IG A+ A +++ I G Sbjct: 10 KRGKVFYFEFMYKGQRYYEKIG---VVSKTVAKEIANEIRSRIIRG-------------- 52 Query: 126 ESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQ 185 E + + RKT TFS A Y++ R +A+ K A + Sbjct: 53 EYIPQKERKT--TFSDAVRVYIEWYRKKSTAREKSKEENIRRARRLEEF----------- 99 Query: 186 GPTSAGPLASLLNLPLSELTPDYIAAWLST--ERQNRPTVTAHAYRLLRAFIKWSNYQKK 243 + LS+++ + ++ E +P +L + ++ + Sbjct: 100 ----------FGSRKLSQISTFLVESYKKKRLEEGVKPQTINMELNILGSILRRAKEAGL 149 Query: 244 YQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLT 303 + G +P + K + L + + + SA P+ + L T Sbjct: 150 FDGELP-------KIEKFRNADRERL-RFLSEREAQRLISACPEWFKPV----VIFALNT 197 Query: 304 GARREEIASLRWSDVDFKWSSMRIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNK 360 G R EI SLRW DVDF+ + ++ K R +P+ V +LL L + + + Sbjct: 198 GLRAGEIFSLRWEDVDFERGVITVREASSKSGKVRKLPMNATVKKLLQGLERKEHGYIFT 257 Query: 361 EGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIM 420 + + R A A + H LR +F + V ++ Sbjct: 258 NRFGLPYKYEDKTY---RRVFKTACEKAGIKDFRFHDLRHTFASWVAMNSKDIYAVQNLL 314 Query: 421 GHKPSALAEKHYRRRPLDLLRKWHEKIETW 450 GH ++ ++ Y D LR E + + Sbjct: 315 GHSSPSVTKR-YAHLTDDYLRSVVESVPNF 343 >UniRef50_D2L4K8 Integrase family protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L4K8_9DELT Length = 395 Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats. Identities = 70/395 (17%), Positives = 125/395 (31%), Gaps = 53/395 (13%) Query: 57 VTTLACRATSGAKAFVFQSVYAGKTLRMTIGNI--NDWKIDDARAEARRLQTLIDTGIDP 114 V A + + GK + G + A+A R++ G P Sbjct: 17 VEGQAVATGKPERIYYVMYRRDGKLIEEKAGRQFQDAMTP----AKAARIRAERIEGKAP 72 Query: 115 RIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLS 174 + EA R T + W +Y + T R YI Sbjct: 73 SNNARREAEEAAKAAEVGRW---TLAKLWTEYASHKPENHALSTDRSRFETYIK------ 123 Query: 175 SRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQ--NRPTVTAHAYRLLR 232 + +E+ + S + P H L + Sbjct: 124 -------------------PAFGEKEPAEVLTLDLDRMRSRLLKQGKSPQTVKHVLALFK 164 Query: 233 AFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPI 292 +++ + P +P ++ + L ++L A+ N Sbjct: 165 RLVRFGVKKGLCDSPDP------RKQTISMPRVDNETTEDLDADELARLVQAIEDEPNIQ 218 Query: 293 ASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGE-RIIPLTPYVSELLNVLA 351 A+ ++++ + TG RR E+ L W DVDF+ + I+ G+ + IPL +L Sbjct: 219 AANFMRLAMFTGMRRGELFKLEWRDVDFERGFIHIRHPKGGKSQKIPLNDAARAVLASHP 278 Query: 352 QSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELP-HISL-HGLRRSFGTLAEWV 409 NS +VF + + + A NR A LP HGLR F + Sbjct: 279 HVENS-----PYVFPGQGGKQR-VTIQVASNRIKARASLPADFRPLHGLRHLFASTLASS 332 Query: 410 E-VPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKW 443 V + +++ HK + ++ Y D L++ Sbjct: 333 GQVDLLTLQKLLTHKSPNMTKR-YSHLRDDALKQA 366 >UniRef50_B7GVF6 Tyrosine recombinase xerC n=1 Tax=Acinetobacter baumannii AB307-0294 RepID=B7GVF6_ACIB3 Length = 398 Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats. Identities = 70/411 (17%), Positives = 139/411 (33%), Gaps = 67/411 (16%) Query: 54 DADVTTLACRATSGAKAFVFQSVYAGKTLRMTIGNIN----DWKIDDARAEARRLQTLID 109 D VT L T + + + GK + ++G + D ++ ++ +R I Sbjct: 28 DLKVTGLRFVVTVQHVRTLARLTFQGKKISKSLGTFSHADFDQNLEKLISQMQRFHQRIA 87 Query: 110 TGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIAD 169 G+ P + E + A Y+ + K+ Y Sbjct: 88 QGLAP-------------FEDEVKPANTLREFALTIYM-----PSAEMRKKSYKDDEAKL 129 Query: 170 HINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVT--AHA 227 +++ L + + P ++ + L+ R T Sbjct: 130 RMHI-------------------LPVIGDYPFEDINAGMLNKLLTELRSKGLTNASINRV 170 Query: 228 YRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSAS-KADDCLQKEQLKSWFSAVR 286 LL + I DL Q V K+ + + + L +++K + Sbjct: 171 RALLSVMFNMA---------INHDLIQVNPVSKVSKFKENNQIERYLNAQEIKRLMDVLN 221 Query: 287 S-----LNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI-KDKIEGERIIPLT 340 + ++N I A ++ LLLTG R+ E ++W+DVD + ++K R I L Sbjct: 222 APHQHGIDNLIIVAIVKFLLLTGVRKREAMDMKWTDVDLTTGVWLLGENKSGKARRITLN 281 Query: 341 PYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRR 400 +L+ L Q ++F + + R + A + +I +H LR Sbjct: 282 QDALAILHSLPQQ-------HAFIFANPMTGQPFNDMRKTFQSIMKAASIRNIRIHDLRH 334 Query: 401 SFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWI 451 +F ++A +V ++GH ++ Y L++ E + I Sbjct: 335 NFASIAVNSGQSLYVVQHLLGHASPQTTQR-YAHLQSSTLKQASEDVAAAI 384 >UniRef50_A5ELA9 Putative phage-like integrase n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5ELA9_BRASB Length = 434 Score = 164 bits (415), Expect = 6e-39, Method: Composition-based stats. Identities = 83/455 (18%), Positives = 164/455 (36%), Gaps = 57/455 (12%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQ-SVYAGKTLRMT 85 +++ T + L G+ + + D+ L SG K + + GK +T Sbjct: 1 MAKGMLTATAV--LKLKPGEHRVEVPDSGAPGLRLVVHPSGRKVWAMRFRRPGGKQGNLT 58 Query: 86 IGNIND-------------WKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAES 132 +G ++ + AR A + ID + E Sbjct: 59 LGPLDTTGDETRAPQIGHPLTLTAARVLANEIARQRAQDIDVIAVQRSDRHRKRLQIEE- 117 Query: 133 RKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGP 192 ++ +F+ A + ++QE T + + R + G + K G Sbjct: 118 -RSANSFADAAKLFIQERTTRKTGEKPRRWIE-------EARLLGWDFSKDEPAIVKGGL 169 Query: 193 LASLLNLPLSELTPDYIAAWLSTERQNR-PTVTA-----------HAYRLLRAFIKWSNY 240 + P+ + D I A ++ R++ P + H L A KW + Sbjct: 170 ADRFRDKPVLDFDGDEIYALIAEARRHGVPGMARRSAAPSDARGRHMAAALSALFKWLHR 229 Query: 241 QKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVL 300 +++ + + + P ++ L ++K +++A +L +P L++L Sbjct: 230 ERRIK--------VNPVLGLSKPPNSPSRRRFLSDAEIKKFWAACTTLGSPF-GPMLKLL 280 Query: 301 LLTGARREEIASLRWSDV-DFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVN 359 LLTG R EIA L +++ D + K +PL+ E+L + + PNS Sbjct: 281 LLTGQRLNEIARLHDTELTDEAIRLPGSRTKNALPHDVPLSSLAKEVLAEVQRVPNSK-- 338 Query: 360 KEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQI 419 +VF +N ++ + A +R L + H LRRS T + + ++ I Sbjct: 339 ---YVFSTNGRA-PVSGFSKAKSRIDDLLNIEPWVFHDLRRSAATGMAEIGIQPHVIEAI 394 Query: 420 MGHKPS---ALAEKHYRRRPLDLLRKWHEKIETWI 451 + H ++A + R + R+ EK + Sbjct: 395 LNHISGHKASVAGIYNRAAYANEKREALEKWAEHL 429 >UniRef50_A1SRZ5 Phage integrase family protein n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SRZ5_PSYIN Length = 337 Score = 164 bits (415), Expect = 7e-39, Method: Composition-based stats. Identities = 49/284 (17%), Positives = 96/284 (33%), Gaps = 19/284 (6%) Query: 167 IADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTER-QNRPTVTA 225 +D + + + ++ +L + ++T + A L P Sbjct: 63 FSDAVKKLLDQDNGRDPSKHQRLRYWVSVFGSLKVGKVTRQQVKAELKRLSNDKAPATLN 122 Query: 226 HAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAV 285 L + ++ + + I + + L E+L F+ V Sbjct: 123 RYKAALGSLYRYLSDEFD----IDYNPVKGIRQY----TENDARTRFLSDEELSILFAMV 174 Query: 286 RSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGE-RIIPLTPYVS 344 + + + + TGARR E+ +L W D++FK + + + GE RI+ LT V Sbjct: 175 KQSKWDQLFLLVLMAITTGARRSEMLTLEWDDINFKTKTAHLPNTKNGEQRILTLTGDVI 234 Query: 345 ELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSA-HNRALVLAELPHISLHGLRRSFG 403 L G+VF AL E+ H LR + Sbjct: 235 TELMKYR-------CIGGYVFPHPDDPTIYFRNFDIHWQSALREGEITDFRFHDLRHTCA 287 Query: 404 TLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKI 447 +L +AQ++GHK + ++ Y ++ K +++ Sbjct: 288 SLLAMNGASLLEIAQVLGHKSITMTQR-YSHLCIEHKAKLTDRV 330 >UniRef50_Q5X3B3 Putative uncharacterized protein n=2 Tax=Gammaproteobacteria RepID=Q5X3B3_LEGPA Length = 353 Score = 164 bits (415), Expect = 7e-39, Method: Composition-based stats. Identities = 64/348 (18%), Positives = 113/348 (32%), Gaps = 21/348 (6%) Query: 115 RIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLS 174 R+ +K + E + E ++E R + + KR I +I Sbjct: 17 RVKIRLKGFPTQHATFERLTDARKWVQQTESAIREGRHFKTTEAKRRTLGEMIDRYIKDV 76 Query: 175 SRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTER--------QNRPTVTAH 226 + + + L L+EL+P IA + P+ Sbjct: 77 IQEKPKNLKNRVLHLNWWKEELGQYSLAELSPAMIAEKRDKLSAGITSRNLKRSPSTVVR 136 Query: 227 AYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVR 286 L + + G L R P L ++ S + Sbjct: 137 YMASLSHAFTIAVKEW-------GWLEDSPMRRVTKPKEPRGRVRFLSDDERARLLSECK 189 Query: 287 SLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERII-PLTPYVSE 345 ++ + + L TG R+ EI L W +VDF S + + + GER + PLT + + Sbjct: 190 KSDSQYLYLAVVLALSTGGRKMEILGLSWKNVDFNRSIITLHETKNGERRVLPLTGHALD 249 Query: 346 LLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTL 405 L+ A+ + + VF I+ R+ AL A + H LR S + Sbjct: 250 LMKQHAKVRHVN---SDLVFPGK-DFKTPIDLRTPFETALKRAGITDFRWHDLRHSCASY 305 Query: 406 AEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWILN 453 +A+I+GHK + ++ Y K ++ I Sbjct: 306 LAMNGASLAEIAEILGHKTLQMVKR-YAHLSEAHTSKVVARMNEKIFG 352 >UniRef50_A3WKP7 Site-specific recombinase, phage integrase family protein n=1 Tax=Idiomarina baltica OS145 RepID=A3WKP7_9GAMM Length = 411 Score = 164 bits (415), Expect = 7e-39, Method: Composition-based stats. Identities = 70/419 (16%), Positives = 149/419 (35%), Gaps = 68/419 (16%) Query: 59 TLACRATSGAKAFVFQSVYAGKTLRMTIGN-INDWKIDDARAEARRLQTLIDTGIDPRIA 117 L R G ++ + YAGK +T+ + + DA+ +A +++ + GIDP++ Sbjct: 23 GLYFRIEQGTASWFVRYTYAGKRKTITLSEGYPNCSLADAKIQAAAIRSKVKNGIDPQLE 82 Query: 118 KAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRG 177 + + A T + D+ R + R +++ Sbjct: 83 RRRETGGAIH----------TVHDLFNDWFD--RAVKNRVKHPGNDERVYRNYLK----- 125 Query: 178 GESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNR-PTVTAHAYRLLRAFIK 236 + L L ++TP + L +Q T ++ A +++ Sbjct: 126 ----------------SRLGKYSLKDITPIDVRNVLDELQQTGNKTTSSRALSIMKRMFN 169 Query: 237 WSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASA- 295 ++ + A + V S + L +++K+ FS R + Sbjct: 170 ----HGIKLNLVSSNPAIYF-TGVDVGQDYSPRERSLSADEIKTAFSVFRKQQDIFTRDN 224 Query: 296 --YLQVLLLTGARREEIASLRWSDVDFKWSSMRIK-DKIEGERIIPLTPYVSELLNVLAQ 352 +LL G R+ EI S RW +D + + +K +P+ + ++ L Sbjct: 225 YLACLLLLHLGCRKSEIISSRWEQIDLEDQTWFFPENKTSKPITVPIPNQMLPVIEELKV 284 Query: 353 SPNSDVNKEGWVFRSNSKS--------------------GKIIEPRSAHNRALVLAELPH 392 +VF S +S K+ + + L A + H Sbjct: 285 R----CAGSEYVFPSRRRSKRRGYISDDTLNHALAKLFGQKVDSKKQPYPNVLGSAGVDH 340 Query: 393 ISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWI 451 ++H LRR++ TL ++VP I + + H+ + + + + L+ R+ + K+ ++ Sbjct: 341 FTVHDLRRTYRTLLAKLKVPDAIAERCLNHELRGVLKVYNQYDYLEERREANAKVADFL 399 >UniRef50_D0ADR3 Predicted protein n=2 Tax=Enterococcus faecium RepID=D0ADR3_ENTFC Length = 382 Score = 164 bits (414), Expect = 7e-39, Method: Composition-based stats. Identities = 56/366 (15%), Positives = 119/366 (32%), Gaps = 33/366 (9%) Query: 111 GIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADH 170 G+DP K V+ + + +T +Y T + +I ++ Sbjct: 23 GVDPLTGKQVRTTRRGFKTKKEAQLALTKLQL--EYENNGLNKTKELTFQEVYDLWIVNY 80 Query: 171 INLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRL 230 K + Q L + ++++T D + + + + Sbjct: 81 EQTVKESSFVKTKEQFANH--ILPAFGAYKINKITIDIAQKFANEKVKK----FVLYREF 134 Query: 231 LRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNN 290 + + +Y K + L + ++ V V + KE+L+ + +V + Sbjct: 135 INNASRICDYAIKLGYLQDNPLKKITVPKRKVSVHEEDTLNFFSKEELEIFLKSVEKKKD 194 Query: 291 PIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI----------------KDKIEGE 334 ++ + L TG R E+ +L W D+DF + ++I + Sbjct: 195 IRMYSFFRTLAFTGMRVGELLALTWKDIDFNDNYIKINKTLARGKNRRLYVEQPKTKNSK 254 Query: 335 RIIPLTPYVSELLNVLAQSPNS--------DVNKEGWVFRS-NSKSGKIIEPRSAHNRAL 385 R IP+ +L ++K VF + ++ ++ +PR + Sbjct: 255 RDIPVDDETMNILKKWRLEQRKWLLTLGINTLSKNQLVFSNQKNEYLQLSKPRKWLEVII 314 Query: 386 VLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHE 445 L I++HGLR + +L V + +GH + Y K Sbjct: 315 KQNNLKRITIHGLRHTHASLLLEAGANIKDVQERLGHSSIQITMDLYIHITDKRKEKTAT 374 Query: 446 KIETWI 451 + +I Sbjct: 375 QFAKYI 380 >UniRef50_Q74H29 Integrative genetic element Gsu32, integrase n=1 Tax=Geobacter sulfurreducens RepID=Q74H29_GEOSL Length = 439 Score = 164 bits (414), Expect = 8e-39, Method: Composition-based stats. Identities = 79/477 (16%), Positives = 158/477 (33%), Gaps = 86/477 (18%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRM 84 MA KF+ + LR +K + + D R SGA++F + + GK + Sbjct: 1 MARQSTKFSDKFLRALK--PQEKPYDIREGD--GFGVRVFPSGARSFFYMYHFDGKRRFL 56 Query: 85 TIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWE 144 +G + DAR + R + GIDP A Q R+ +T + + Sbjct: 57 NLGKYPQLSLADARQKHRDAVSQHAKGIDPLAATQE--------QKRERREAITVADLID 108 Query: 145 DYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSEL 204 +Y++ + R ++ + L ++ Sbjct: 109 EYVKNWAKVYKVERSATEDERALSKDV---------------------LPYWGKRKAKDI 147 Query: 205 TPDYIAAWLSTE-RQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVP 263 A L R+ P + ++ R +++ + KY P + K VP Sbjct: 148 KRTDAIALLERIVRRGSPGQARNILKVGRKMYEFAIER-KYVEANPFS-----RISKAVP 201 Query: 264 VSASK-ADDCLQKEQLKSWFSAVR-SLNNPIASAYLQVLLLTGARREEIASLRWSDVDFK 321 + + L + ++K +SA+ S + L+++L+T R E+ + ++D + Sbjct: 202 ATMPRTRSRVLTESEIKYIWSAIDKSAGSDETKRALKLILVTAQRPGEVIGMHRREIDGE 261 Query: 322 WSSM---RIKDKIEG---------ERIIPLTPYVSELL---------------------- 347 W ++ RIK + + + L+P EL+ Sbjct: 262 WWTIPPERIKTEKDRTRSNSVGPQPHRVYLSPLALELIGDKDGYIFESPRGGAMDSKALS 321 Query: 348 ---NVLAQSPNSDVNKEGWVFRSN------SKSGKIIEPRSAHNRALVLAELPHISLHGL 398 + P + EG VF +++E A+ L + H L Sbjct: 322 HVVHAAPLVPELVRDTEGHVFAGPCGPVAAKALMQLLEKEIAYPDKEKYYGLTRWTPHDL 381 Query: 399 RRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWILNEA 455 RR+ T + +PT +++ H + + + R + K ++ Sbjct: 382 RRTARTRMSAINIPTRHAERVLNHTLPGIQKTYDLYRYDPQKKAALTKWAAYLEELL 438 >UniRef50_D2U1I0 Phage integrase n=1 Tax=Arsenophonus nasoniae RepID=D2U1I0_9ENTR Length = 392 Score = 163 bits (413), Expect = 9e-39, Method: Composition-based stats. Identities = 77/428 (17%), Positives = 147/428 (34%), Gaps = 67/428 (15%) Query: 45 EGKKQTFLWDADVTT----LACRA-TSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARA 99 + + W A + L + SG K F+++ GK +T+G+ + DA + Sbjct: 3 PKQSAYYAWQASSSRGTGRLGVKVYPSGRKTFIYRYFINGKASFITLGDYPALCLSDASS 62 Query: 100 EARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTK 159 + + G + + +++Y+ + R + K Sbjct: 63 RCKEEAQKLQQG------------------QPIISPYASLKMLFKNYITDQRL----RGK 100 Query: 160 RPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQN 219 R Y K + G + P ++TP++I LS + Sbjct: 101 RSY-----------------EKTNNRLKQVLGSQHINGDTPARDITPEHIKKVLSEFIER 143 Query: 220 RP-TVTAHAYRLLRAFIKWS----NYQKKYQGIIPGDLAQDYNVRKMVPVSASKA-DDCL 273 L A + N K G I + + A KA D L Sbjct: 144 GALAGANKVRANLHAVFNFGLFSDNDPAKLGGKILYGITSNPVTVVPSQRGADKALDRFL 203 Query: 274 QKEQLKSWFS------AVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI 327 ++L+ V SLN A + + G R E+ + + D +++ I Sbjct: 204 SWKELRILLETINVPTEVCSLNPDYAQLLMLCIFTGGQRPWELMTNTHDNWDKNNNTLTI 263 Query: 328 K---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKII--EPRSAHN 382 K ++PL P ++L + Q ++F S+++ G ++ E Sbjct: 264 PPHISKTGDYHVVPLCPTAVKILTEMEQR----YPNNTFLFPSDTQEGHLLPSEYAKQLR 319 Query: 383 RALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRK 442 + V + + +RR+F TLA + + + ++ HK ++ +HY R D L++ Sbjct: 320 KFCVREKFTKFTPRDIRRTFKTLAGEMGIRAEMRDRLQNHKMPGVSARHYDR--YDYLKE 377 Query: 443 WHEKIETW 450 E IE W Sbjct: 378 KSEIIELW 385 >UniRef50_C6QCE7 Integrase family protein n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QCE7_9RHIZ Length = 418 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 81/438 (18%), Positives = 152/438 (34%), Gaps = 44/438 (10%) Query: 34 TFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNINDW 92 T RL + KK D L R SGA+++VF+ ++ K + +G+ Sbjct: 4 TTHRLNAISASNIKKPGLYPDGA--GLYLRVKPSGARSWVFRYMHDRKPRYLGLGSAASV 61 Query: 93 KIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRT 152 + AR+ A + +D G DP AK E + +A + +TF E Y+ Sbjct: 62 SLATARSLAGDARRQLDLGQDPIEAKRAAERETAADKARA----MTFKECAEAYMAAHEP 117 Query: 153 GISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAW 212 + ++ + ++ +T + + Sbjct: 118 SWKNAKHCEQWHSTLRRYL---------------------YPKFGGIAVALVTTEMVFEA 156 Query: 213 LSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYN--VRKMVPVSASKAD 270 + + P + + I W+ + + G P + K V+ + Sbjct: 157 IQPIWHSMPETASRVRGRIEVVIDWAKARGAFSGENPARWRGHLANLLPKPSKVAKVEHH 216 Query: 271 DCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFK---WSSMRI 327 + + L + S +R+ + A L+ +LT AR E +WS+ D + W+ + Sbjct: 217 AAMPFDDLPALMSELRAATGLTSRA-LEFTILTAARTTEALGAQWSEFDLEKKIWTVPAV 275 Query: 328 KDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVL 387 + K + +PL+ E++ L V + +VF + L Sbjct: 276 RMKAGKDHRVPLSTRAVEIIKELET-----VKRNEFVFPGEKPGRHLSNMSML--MLLRR 328 Query: 388 AELPHISLHGLRRSFGTLAEW-VEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEK 446 + +++HG R +F A P IV + H + E YRR DLL K Sbjct: 329 LKRGELTVHGFRSTFRDWAAETTSFPNFIVEMALAHAIESKVEGAYRRG--DLLEKRRAL 386 Query: 447 IETWILNEAGITIKNNVD 464 + W+ A ++ D Sbjct: 387 MVAWMQYCAKAKMRPVAD 404 >UniRef50_C0QB98 Putative uncharacterized protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QB98_DESAH Length = 365 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 65/350 (18%), Positives = 125/350 (35%), Gaps = 31/350 (8%) Query: 111 GIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAK----TKRPYSTRY 166 G + R K K+ S K T +A + + I + P Sbjct: 24 GNNLRTNKLFKVRIKLSNGKWKSKQVNTLELAKKVEAKFKTQSIEEDVFNIHRAPVIDGV 83 Query: 167 IADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQN------- 219 + ++ +S S + A L + + ++TP ++ L+ Sbjct: 84 WSKYLTWASLNKRSWIDDRIRWELHISAHLKGMKMDKITPSHVQDILNHMATKDTPKGGH 143 Query: 220 -RPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQL 278 P L++ WS Q YQG P + P+ ++ ++ L K L Sbjct: 144 YAPATIKQVLVLIKRVFNWSMQQGLYQGGNPCKSVEA-------PMFDNRINNPLDKSGL 196 Query: 279 KSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIK---DKIEGER 335 +S S + + NN A ++ L +G R+ E+ SL W VDF+ + ++ K + + Sbjct: 197 RSLMSVLDTWNNERAILVIKFALYSGKRKGEVLSLTWDSVDFENHLLTLQAMNTKSKKAQ 256 Query: 336 IIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISL 395 +PL + +L + SD +VF S + R A + I Sbjct: 257 SLPLNNHCMTILERCRKLKVSD-----YVFPS-TLGNYYNTFDETWKRIRKRAGIS-IRF 309 Query: 396 HGLRRSFGTLAEWVE-VPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWH 444 H LR ++ + V + +++GH + ++ Y +L++ Sbjct: 310 HDLRHTYASYLASSGKVDIYTLKELLGHSTIEMTQR-YAHLVNGVLKRAV 358 >UniRef50_B3AX37 Site-specific recombinase, phage integrase family n=7 Tax=Enterobacteriaceae RepID=B3AX37_ECO57 Length = 440 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 71/419 (16%), Positives = 136/419 (32%), Gaps = 50/419 (11%) Query: 53 WDADVTTLACRATSGAKA----FVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLI 108 +D + F+ +AGK M IG+ + + AR A+ L + Sbjct: 39 FDGKADGNGLYLCYPKNYTMPFWRFRYKFAGKQRAMVIGSYAELSLSRARETAKELSARV 98 Query: 109 DTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIA 168 G D K + AEA + + E+ K + S +Y + Sbjct: 99 ALGYDVAAEKQERKAEALA-KMEAEKNAIRVSELAAEYFERQ------------------ 139 Query: 169 DHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNR-PTVTAHA 227 + + + ++ ++ P +I L PT+ Sbjct: 140 -----ILPRWKHPDILRRRIDKDINPRIGHMKAEDVKPRHIDEMLKAIVDRGAPTIATDV 194 Query: 228 YRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRS 287 R R + + + I P + + S D L +E+L +F A+R+ Sbjct: 195 LRWTRRIFDYGIKRHVLE-INPCSAFEVSDA----GGKESSRDRWLTREELIRFFQAMRT 249 Query: 288 LN--NPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIK--DKIEGERI-IPLTPY 342 + ++LL R+ E+ + RW + D + + G+ I IPL P Sbjct: 250 AKGFSRQNELTFKLLLALCVRKMELCAARWEEFDLDNAVWHLPEERSKNGDPIDIPLVPP 309 Query: 343 VSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIE-------PRSAHNRALVLAELPHISL 395 V E L L WV + ++I P + + E+P ++ Sbjct: 310 VIEWLKEL----RVLSCNSAWVLPARKMQHRMIPHIQESTLPVALAKVRAEMPEVPDFTI 365 Query: 396 HGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWILNE 454 H RR+ T + V + + + H+ + + R + D K +++ Sbjct: 366 HDFRRTARTHLAALGVDPVVAERCLNHRIKGVEGIYNRYQYFDERTSALAKWTNLLVSL 424 >UniRef50_C6X804 Integrase family protein n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X804_METSD Length = 492 Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 87/485 (17%), Positives = 170/485 (35%), Gaps = 58/485 (11%) Query: 25 KMALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVY-AGKTLR 83 K A +R FT + KQ +D++ T L+ + K F Q+ GK + Sbjct: 2 KEANNRISFTKTSIDALPFEPKGKQKIYYDSNPTDLSLIVSQHTKTFYLQARVKNGKKTK 61 Query: 84 MTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAK---------------AVKIAEAESL 128 +++G ++ A+ E +++ ++ GI P + + + + + Sbjct: 62 VSLGKYGAITLNQAKEEVVKVRAKLNAGIHPNLERKKLTNQAEIDRIELEKQQENDRKVA 121 Query: 129 QAESRKTKVTFSVAWEDY-----LQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKR 183 + + +K + +Y ++ S+ S Y +H + E K Sbjct: 122 EFQIQKNIESLDWLLNEYRDEHIIKHKGGSESSINDINDSKFYFKNHTFTFLKMREKTKT 181 Query: 184 GQGPT-----SAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTA-----------HA 227 L + L+ P E+T + A P A A Sbjct: 182 RDKGFDWDFDRNEELPNWLDRPYREITQREVLARFKLLSVALPKNNAGVLKPMTRSYQKA 241 Query: 228 YRLLRAFIKW-------SNYQKKYQGIIPG--DLAQDYNVRKMVPVSASKADDCLQ--KE 276 ++ L A W +K +I D + R + ++ ++ + Sbjct: 242 FKNLGAAYSWILNKTQAFTDEKTSDEMIDSFMDNPVEIITRLKLWTASKPRENFIDFFSY 301 Query: 277 QLKSWFSAVRSLNNP--IASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGE 334 W+ A +A Y+ V LL G R E+A L W D++ +++ + Sbjct: 302 DSYLWWKAADEYRYEGMLARDYIFVSLLQGGRSIEVAPLSWDDINLDSKTIKYDKTKNKQ 361 Query: 335 -RIIPLTPYVSELLNVLAQSPNSDVNKEGWVF-RSNSKSGKIIEPRSAHNRALVLAELPH 392 +P+T V E+L + + + +VF S SK G I++ + + Sbjct: 362 TYEVPMTKLVFEILERRFKEKKPE---DKYVFAFSGSKYGYIVKSARWYFEEIAKISGVK 418 Query: 393 ISLHGLRRSFGTLAEWVEVPTG--IVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETW 450 IS H RR+ +A + + I+ HK + +Y + ++ +KIE Sbjct: 419 ISHHDFRRTITNIALQDGMGIEKITIDHILKHKLQG-TDINYFVKNKRIILNALQKIEDT 477 Query: 451 ILNEA 455 ILN+ Sbjct: 478 ILNQV 482 >UniRef50_Q1MNY2 Integrase n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=Q1MNY2_LAWIP Length = 383 Score = 163 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 58/286 (20%), Positives = 112/286 (39%), Gaps = 30/286 (10%) Query: 179 ESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNR---------PTVTAHAYR 229 E K Q + L+ L++ LT + I + P H Sbjct: 106 EKKSLKQDISRVKYLSDLMHKSPDILTTNDIDTLRKKLTLTKSSKGGASLSPASIKHILV 165 Query: 230 LLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLN 289 LL+ I + + I P +L D +P ++ + L K QLK+ A+ + Sbjct: 166 LLKRLINFGIQRNL--CIKPQNLYID------MPKVDNQKTEILSKNQLKNLLLALDAEP 217 Query: 290 NPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKD---KIEGERIIPLTPYVSEL 346 N A++++ L+TG R+ + +L+WSD DF+ + + + K IP+ + Sbjct: 218 NQSDVAFIRLALVTGMRKSALLALKWSDCDFENNIITLSGNYAKKGKTDYIPMNNSAKSI 277 Query: 347 LNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELP-HISL-HGLRRSFGT 404 L + + ++F + + + + + R A+LP HGLR +F + Sbjct: 278 LLSIPK------GNSDFIFATRNGTKRTTYNQRLIKRIKEKAKLPKDFRPLHGLRHNFAS 331 Query: 405 LAEWVE-VPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIET 449 V + +++ H+ A+ ++ Y D L+K I+ Sbjct: 332 RLASSGKVDLYTIQRLLTHETPAMTQR-YAHLHNDALKKAAAIIDD 376 >UniRef50_B2TTV9 Site-specific recombinase, phage integrase family n=25 Tax=Proteobacteria RepID=B2TTV9_SHIB3 Length = 439 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 73/412 (17%), Positives = 135/412 (32%), Gaps = 48/412 (11%) Query: 55 ADVTTLACRATSGAKA--FVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGI 112 AD L R K + F+ AGK+ M IG+ ++ + AR A+ L + G Sbjct: 43 ADGNGLYLRYREADKTPTWRFRYKLAGKSRAMLIGSYSELSLSKARETAKELSARVALGY 102 Query: 113 DPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHIN 172 D K EA + + E+ K + S +Y + Sbjct: 103 DVAGEKQKHKTEALA-KMEAEKNAMRVSELAAEYFERQ---------------------- 139 Query: 173 LSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNR-PTVTAHAYRLL 231 + + + ++ + ++ P +I L PT+ R Sbjct: 140 -ILPRWKHPDILRRRIDKDINPCIGSMKVEDVKPRHIDDMLKGIVDRGAPTIATDVLRWT 198 Query: 232 RAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNP 291 R + + + I P + + + D L +++L F A+R+ Sbjct: 199 RRIFDYGIKRHALE-INPCSAFEVADA----GGKEAARDRWLTRDELIQLFKAMRTAKGF 253 Query: 292 IASAYLQVLLLTGA--RREEIASLRWSDVDFKWSSMRIK--DKIEGERI-IPLTPYVSEL 346 + LL R+ E+ + RW + D + + G+ I IPL E Sbjct: 254 SRQNEITFKLLLALCVRKMELCAARWEEFDLDGAVWHLPEERSKNGDPIDIPLPSPAVEW 313 Query: 347 LNVLAQSPNSDVNKEGWVFRS----NSKSGKIIEPRSAHNRALVLAELPH---ISLHGLR 399 L L ++ WV + N I E A V AE+P ++H R Sbjct: 314 LREL----HTFSCNSAWVLPARKMQNRMIPHIQESTLPVALAKVRAEMPDVPNFTIHDFR 369 Query: 400 RSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWI 451 R+ T + V + + + H+ + + R + D + + + Sbjct: 370 RTARTHLAALGVDPVVAERCLNHRIKGVEGIYNRHQYFDERKAALAQWADLL 421 >UniRef50_B6ATL3 Phage-related integrase n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6ATL3_9RHOB Length = 420 Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 82/424 (19%), Positives = 153/424 (36%), Gaps = 60/424 (14%) Query: 48 KQTFLWDADVTTLACRATSGAKAFVFQSVYAG--------KTLRMTIGNINDWKIDDARA 99 ++ L D + L + + ++ + G + IG+ +AR Sbjct: 27 ERITLSDQVCSGLKLVINNKSCSWTYAYRKRGYIDGGKRHPQRTIKIGDPMSMSPAEARL 86 Query: 100 EARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTK 159 A +++ I G DP + S +A+ + T S E Y +E K Sbjct: 87 AAETIKSQIRAGEDPALTLRANDQMRRSEEAQKK----TCSQWLERYTREQMKSGQTK-- 140 Query: 160 RPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQN 219 Y + + + + LL+ + +TP ++ L+ + Sbjct: 141 --YKQDEVRNVLFVLQELF-----------------LLDAYPNAITPRHMRD-LADMYRE 180 Query: 220 RPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLK 279 RP + F+ + ++ +++ + ++ EQL Sbjct: 181 RPATGRQRLGAMSRFLDYLLDEEVVTTNSVVAVSKRRKPKPP-----PPRENFFSPEQLA 235 Query: 280 SWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI--KDKIEGERII 337 S + A PI YL+ ++ T R E A LRW VD S + D E + Sbjct: 236 SLWHA--EGLKPIYQRYLRFMISTPLRAGEAAKLRWDQVDADRSELHFTHHDTKNSEHFV 293 Query: 338 -PLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLA-ELPHISL 395 PL+ + ++ Q + +VF +S G + S NR + A + H L Sbjct: 294 MPLSKIAANVIWAFPQEQSR------FVFPLSSLDGAQMSAWSHFNRCVRKASGIDHFIL 347 Query: 396 HGLRRSFGTLAEW-VEVPTGIVAQIMGHKPSAL---AEKHYRR-----RPLDLLRKWHEK 446 H LRR+F TL + I+ ++ HK SA +HY++ + D++ +W + Sbjct: 348 HDLRRTFSTLMAEHTDTSESIIDSLLNHKQSATRGGVMRHYQKAKNLEKRRDVMAQWGKL 407 Query: 447 IETW 450 +E W Sbjct: 408 LEKW 411 >UniRef50_A0EVM1 Integrase n=77 Tax=cellular organisms RepID=A0EVM1_ECOLX Length = 396 Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats. Identities = 80/438 (18%), Positives = 155/438 (35%), Gaps = 66/438 (15%) Query: 33 FTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAGKTLRMTIGNIND 91 T RLR +K + D D L T G +F + G+ +T G Sbjct: 2 LTDTRLRHLK--PKEKLYKVNDRD--GLYVAVTPAGTISFRYNYSINGRQETVTFGRYGV 57 Query: 92 --WKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 + +AR + ++ +G P KA A + + TF E +L+ Sbjct: 58 GGITLAEARERLNEAKKMVASGRSPAREKARDKARIKDAE--------TFGAWAEKWLRG 109 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 + S + R + R +SK Q L+E+T + + Sbjct: 110 YQMAESTRDMRRS----------VYQRELKSKFAQQ--------------KLTEITHEDL 145 Query: 210 AAWLSTE-RQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 A + P HA ++ +W+ + + + P DL + ++ K P Sbjct: 146 RALTDNIVERGAPATAVHAREIVLQVYRWAIERGQ-KVENPSDLVRPASIAKFEP----- 199 Query: 269 ADDCLQKEQLKSWFSAVRSLNN-PIASAYLQVLLLTGARREEIASLRWSDVDFK---WSS 324 D L ++ + + + P A +++LLLT R+ E+ + W +++F W+ Sbjct: 200 RDRALTPVEIGLMYRYMERVGTTPSIRAAVKLLLLTMVRKSELTNATWKEINFSEALWTI 259 Query: 325 MRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHN-- 382 + + K ++ L+ +++ L S ++ S S + + + Sbjct: 260 PKERMKRRNPHLVFLSRQAMDIMIALKTFAGS----SDFILPSRYDSDAPMSSATLNRVL 315 Query: 383 ----RALVLAE--LPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKH----Y 432 R LP H LRR+ TL T + + + H+ + + Y Sbjct: 316 TLTYRLAQKEGDLLPKFGPHDLRRTASTLLHEAGYNTDWIEKCLAHEQKGVRAVYNKAEY 375 Query: 433 RRRPLDLLRKWHEKIETW 450 R + ++L+ W I+ W Sbjct: 376 REQRAEMLQDWANMIDEW 393 >UniRef50_C5SCJ7 Integrase family protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SCJ7_CHRVI Length = 425 Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats. Identities = 78/443 (17%), Positives = 149/443 (33%), Gaps = 65/443 (14%) Query: 33 FTFERLRRFTLPEGKKQTFLWDA---DVTTLACRA-TSGAKAFVFQSVYAGKTLRM-TIG 87 T ++ PE K+ WD R SG K+FV + T R+ TIG Sbjct: 5 LTDRFIKSVEPPEKGKR-IYWDDHRDSPKGFGLRVLASGTKSFVLRYRAKTGTERIQTIG 63 Query: 88 NIND-WKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDY 146 W + AR EA +++ +D G DP + E +T + A E + Sbjct: 64 EYPTPWSLTAARLEAAKIRANVDAGTDPLQRRREVRQE------------LTVADAVERF 111 Query: 147 LQELRTGIS-AKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 + G++ R Y R + L L L + Sbjct: 112 CKARVDGMARGAEVRRYFERDL-------------------------LPVLGRRQLKSVK 146 Query: 206 PDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVS 265 I A + + ++ P A + ++ ++ +I A ++ Sbjct: 147 RSEIIALIEDKAESAPRAAALLLAYTKLLFSYAEDRE----LIEVSPATGIKPGRISSAM 202 Query: 266 AS-KADDCLQKEQLKSWFSAVRSLN-NPIASAYLQVLLLTGARREEIASLRWSDVDFKWS 323 S K L + +++ ++ ++ + + + L+++L+TG R E+ +RW +V+ + Sbjct: 203 KSVKRGRVLDEAEIRDFWIGADAVGVHRLTALALKLILVTGQRPGEVVGMRWDEVEGETW 262 Query: 324 SMRI--KDKIEGERIIPLTPYVSELLNVLAQ-----SPNSDVNKEGWVFRSN-SKSGKII 375 ++ + K + LT +L S G+VF K Sbjct: 263 TIPASRRGKTSTAHSVYLTETARVILEQARAEVARLSERRRWEPSGYVFEHREGKPATTA 322 Query: 376 EPRSAHNRALVLAELPH------ISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAE 429 A +R H LRR+ T + + + +++GH + Sbjct: 323 GLSRALDRYADQLGAKDHPDWGRWHPHDLRRTCRTRLSEIGISEEVAERVIGHTKLGVVA 382 Query: 430 KHYRRRPLDLLRKWHEKIETWIL 452 + + R +R E E +L Sbjct: 383 IYNQHRYSLEIRAALEAWERRLL 405 >UniRef50_C9NQJ4 Phage integrase n=6 Tax=Gammaproteobacteria RepID=C9NQJ4_9VIBR Length = 415 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 70/427 (16%), Positives = 137/427 (32%), Gaps = 50/427 (11%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLR- 83 MA + K T +++ K+ L+D D L R +G+K ++ R Sbjct: 1 MAKTTVKLTPTKIKSSK--PKDKEYNLFDGD--GLRLRIKPNGSKHWILNYYRPSNRKRA 56 Query: 84 -MTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVA 142 +++G D + +AR + L+ GIDP+ + E + + TF Sbjct: 57 NLSLGKYPDLSLANARKMTLEAKELLAQGIDPQEERKRHQLE------QKANHEHTFINV 110 Query: 143 WEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLS 202 + + + ++ D+ R E L ++P+ Sbjct: 111 TTKWFEIKKDDVTP------------DYAVDIWRSLELH----------IFPQLSDVPVR 148 Query: 203 ELTPDYIAAWLS-TERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKM 261 ++T + L E + + L + ++ G++ + Sbjct: 149 DITAPQVIELLKPIEAKGSLETVKRLAQRLNEVMNYATN----CGLVQANPLTGIKAAFK 204 Query: 262 VPVSASKADDCLQKEQLKSWFSAVRSLN-NPIASAYLQVLLLTGARREEIASLRWSDVDF 320 P + L +L A+ + + ++ L T R E + RW ++D+ Sbjct: 205 KPKKEN--MAALTPAELPELMGAIANASIKRTTRCLIEWQLHTMTRPSEASGARWEEIDW 262 Query: 321 KWSSMRI---KDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEP 377 I + K E IPLT + ELL V+ ++F S+ K Sbjct: 263 DEKVWTIPPERMKKRREHRIPLTEQMLELLEVI----KPISGHREFIFPSDRDPKKPCNS 318 Query: 378 RSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPL 437 ++A+ + + HGLR T ++ + H Y R Sbjct: 319 QTANMALKRMGFAGRLVSHGLRSLASTTLNEQGFEPDLIEAALAHADDNQVRSAYNRTDY 378 Query: 438 DLLRKWH 444 R+ Sbjct: 379 LERRRPM 385 >UniRef50_D0CYA1 Phage integrase n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CYA1_9RHOB Length = 479 Score = 161 bits (407), Expect = 5e-38, Method: Composition-based stats. Identities = 82/444 (18%), Positives = 166/444 (37%), Gaps = 66/444 (14%) Query: 29 SRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYA-GKTLRMTI 86 +R+ T +R T+ ++T D L R + G K+F ++ A G +T+ Sbjct: 26 NRKALTDAFVRTVTV---DRRTEFSDTQCPGLKLRVSKTGKKSFALKARDAFGTVQTVTL 82 Query: 87 GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDY 146 G + AR A+ + L+ G + K + AE R T + ++Y Sbjct: 83 GEYPATTLRQARDAAQEARRLLRVGKNFAAEKRTRKAE--------RSRAPTLAELIQEY 134 Query: 147 LQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTP 206 ++ ++ K RP + + + + A LL+ ++ LT Sbjct: 135 --QVVGSVTTKVWRPRA---------------DGRLPEAQSSVQRVFAPLLDKNVTTLTA 177 Query: 207 DYIAAWLSTERQ------NRPTVTAHAYRLLRAFIKWSNYQKKYQ----GIIPG----DL 252 + A ++ R + + A L + W+ +K++ G P D+ Sbjct: 178 EDFADVMANYRPKQRGKVSANGSVSRARSYLSVVMDWAANRKRFGKIGAGRNPALDVVDI 237 Query: 253 AQDYNVRKMVPVSASKADDCLQKEQLKSWFS-----AVRSLNNPIASA------YLQVLL 301 ++ P + L +++L A ++L++ +A+ + +L Sbjct: 238 KLTHDPAISDPSITGGRERVLTEDELALVLPLMTYPAPKALSSRLAAEDHLRPVAHRFIL 297 Query: 302 LTGARREEIASLRWSDVDFKWSSM-RIKDKIEG-----ERIIPLTPYVSELLNVLAQSPN 355 LT AR E+A ++W DVDF+ +I + +PL+ LL L + Sbjct: 298 LTLARLREVAEMKWRDVDFRSGIWTKIPIDKRSAAESRRQRVPLSDAAMHLLKSLPGADT 357 Query: 356 SDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGI 415 +D + VF ++ ++ R + + H LRR+ T+ + P + Sbjct: 358 AD--PDDLVFPNSYGQVEVNWNRGT-EAIKKASGTSGWTRHDLRRTSATILAALGAPIDL 414 Query: 416 VAQIMGHKPSALAEKHYRRRPLDL 439 +A I+GH ++H ++ Sbjct: 415 IADILGHSNR--TKRHGLSGAVEH 436 >UniRef50_B1RM53 Phage integrase n=4 Tax=Clostridium RepID=B1RM53_CLOPE Length = 400 Score = 161 bits (407), Expect = 5e-38, Method: Composition-based stats. Identities = 61/383 (15%), Positives = 127/383 (33%), Gaps = 53/383 (13%) Query: 103 RLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPY 162 + + + G + K ++ + S K + D + L T + Sbjct: 26 KFRGQLTIGYNENGTPKRKSFTGKTKKEVSDK----MKDFYVDNNRGLLPTDDKITLSKW 81 Query: 163 STRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLST---ERQN 219 ++ + + ++ + +S+ + L +L +I A+ ++ E + Sbjct: 82 FYTWLFTYRIHDLKPSSFERYEGLYRNYIESSSIGKIKLMDLRTHHIQAYYNSLVSEERK 141 Query: 220 RPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCL---QKE 276 P+ + L++ + Q + G + ++Y +P + + + E Sbjct: 142 SPSTIKTINKCLKSCLN--------QALKEGYITKNYCTLITLPKGSESPKEIINIFTLE 193 Query: 277 QLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI--------- 327 + +++ + N + L TG R EI +L+W+D++FK + + I Sbjct: 194 EQQTFMKECMNNKN---GMLYILALGTGLRLGEILALKWTDINFKNNYIDINKAIKSTYK 250 Query: 328 ---------------KDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNS--- 369 R +PL + ELL + D + ++ N+ Sbjct: 251 IDSKGNREFQIIEQQPKTKNSIRTVPLNDNLIELLQQHRKKQMIDRDSNIEIYFDNNLVF 310 Query: 370 --KSGKIIE---PRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKP 424 G + R R L L + H LR +F T VP V I+GH Sbjct: 311 STPIGNYLNESNVRKTFKRILNKCNLKELRFHDLRHTFATRLFENGVPPKTVQTILGHSD 370 Query: 425 SALAEKHYRRRPLDLLRKWHEKI 447 + Y D K +K+ Sbjct: 371 ISTTLNIYTHVMKDTKDKAIDKL 393 >UniRef50_C0GUW3 Integrase family protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GUW3_9DELT Length = 414 Score = 161 bits (406), Expect = 7e-38, Method: Composition-based stats. Identities = 79/395 (20%), Positives = 141/395 (35%), Gaps = 51/395 (12%) Query: 69 KAFVFQSVYAGKTLRMTIGNIND-WKIDDARAEARRLQTLIDTG------IDPRIAKAVK 121 K F + GK +G ++ W A E RL+ TG + R + V+ Sbjct: 28 KYFSIRYTLDGKRHEEALGWASEGWSPQSAAEELARLKKAQRTGEGALTLAERREMENVR 87 Query: 122 IAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESK 181 AE L+ E TF++ WE Y ++++ ++ Y + H+ K Sbjct: 88 RAEDIKLKKEQEIASTTFNIIWEKYF------LNSQHEKAYKSWDTERHL--------YK 133 Query: 182 KRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQ 241 K Q + L ++ + A LS P +A ++R +++ Sbjct: 134 KWIQPFIGEVFFTKVTAFHLEKIKKEMRDASLS------PRSIGYALSVVRQVFCYASDH 187 Query: 242 KKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLL 301 ++G+ P L + +P ++ L + + + ++ + L Sbjct: 188 GIFEGVDPVSLVK-------MPHYDNRRIRFLTHSEAEILLDVLC-FSSQNTHDIALIAL 239 Query: 302 LTGARREEIASLRWSDVDFKWSSMRIKDKIEG-ERIIPLTPYVSELLNVLAQSPNSDVNK 360 G R EI SL W D+DF + +D R IP+T V ++L SD Sbjct: 240 HCGPRAGEIFSLTWQDIDFSQGLVTFRDTKNKYVRHIPITKRVRKMLE-----RRSDDRS 294 Query: 361 EGWVFRSNSKSGKIIEPRSAHNRALVLAE--------LPHISLHGLRRSFGTLAEWVEVP 412 VF + G+ + A R + + H LR + + VP Sbjct: 295 SALVFPDRN-GGRRKKVSKAFERTIKELGWNKGIDDPRQKVVFHTLRHTCASWLVMAGVP 353 Query: 413 TGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKI 447 V + +GHK + E+ Y D L++ E + Sbjct: 354 LYTVKEYLGHKQISQTER-YAHLAPDSLKQATEAL 387 >UniRef50_D1RC05 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1RC05_9CHLA Length = 369 Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats. Identities = 65/347 (18%), Positives = 118/347 (34%), Gaps = 33/347 (9%) Query: 108 IDTGIDPRIAKAVKIAEAESLQAE-----SRKTKVTFSVAWEDYLQELRTGISAK----- 157 + GI RI+K ++ ++ KT T A + QE Sbjct: 3 MAEGIQKRISKKNVVSYRVQIRESDGFPPKSKTFPTLQEAKDWQKQEKARRRQGYGSSDL 62 Query: 158 -TKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWL--- 213 T + I + + R + L++++ D IA Sbjct: 63 MTGKKTLIDLIDRYETIILPTKPKDARNMKRHLDWWRNKIGKYGLTKISSDLIAQCRQEL 122 Query: 214 -----STERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 S + + L + GI D R++ + SK Sbjct: 123 AEGVTSKKTKRSHATVNRYLATLSTVFTY--------GINECGWITDNPCRRVSKFTESK 174 Query: 269 -ADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI 327 D + + + F ++ N + + + TG RR EI L W ++ ++ + Sbjct: 175 GRDRIVAENEFTRLFEECKNSRNEHLLPVVVLAVTTGMRRGEILGLTWDCINLDRQTIIL 234 Query: 328 KDKIEGE-RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALV 386 K+ G+ R + + ELL Q N + +VF + + GKI R A + AL Sbjct: 235 KETKNGKQRTVSIVGEALELLRSHYQKRNPNT---PYVFPAKKRFGKIC-IRKAWDEALK 290 Query: 387 LAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYR 433 A + ++ +H LR +F T A +A MGH+ + ++ Sbjct: 291 RAGIQNLRIHDLRHTFCTYASETGASILELAAAMGHQTLQMVNRYTH 337 >UniRef50_A9IRV8 Int3 protein n=1 Tax=Bordetella petrii DSM 12804 RepID=A9IRV8_BORPD Length = 402 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 73/400 (18%), Positives = 136/400 (34%), Gaps = 43/400 (10%) Query: 59 TLACRA-TSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIA 117 L +G++ + ++ GK IG D + +AR + L+ G+ P Sbjct: 32 GLHLLVQPNGSRLWRYKFRLGGKEQVFAIGRYPDVGLAEARERHLAARRLVADGVSPTAQ 91 Query: 118 KAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRG 177 + A + +R TF + + ++ T R R I ++ Sbjct: 92 RRDDRA--RMAEDAARAKAGTFKAVLDSWKATPARALAPATIR-QRDREIDRYLE----- 143 Query: 178 GESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKW 237 L P+ E+T +A L T + P V R LR + Sbjct: 144 ----------------PKLGARPVGEITRRELADLLKTVATDTPEVA----RNLRTHMNS 183 Query: 238 SNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNN-PIASAY 296 G+I G+ + +P + + ++L + +++ + P A Sbjct: 184 IFEHAVDVGLIAGNPTPGP---RALPARKQTSHPAVAMDELGALLASIDASACQPATKAA 240 Query: 297 LQVLLLTGARREEIASLRWSDVDFK---WSSMRIKDKIEGERIIPLTPYVSELLNVLAQS 353 ++LLLT R+ EI S RW ++D W + K +PL+ ELL + Sbjct: 241 FRLLLLTACRKLEITSGRWDEIDLDAGEWLIPADRMKTRTAHWVPLSRQAVELLRAVRAH 300 Query: 354 PNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWV-EVP 412 D +VF K + P + + + +++HG R F T A Sbjct: 301 SGGD-----YVFPHRDKPNTPMSPTALNEMLRRVGYRREMTVHGTRSIFSTWANAQPGAN 355 Query: 413 TGIVAQIMGHKPSA-LAEKHYRRRPLDLLRKWHEKIETWI 451 ++ + + H P + + R D R + + Sbjct: 356 VDVIERCLAHAPRDKVRAAYNRHAYKDERRALLQSWADVL 395 >UniRef50_Q2IUV8 Phage integrase n=1 Tax=Rhodopseudomonas palustris HaA2 RepID=Q2IUV8_RHOP2 Length = 450 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 82/475 (17%), Positives = 152/475 (32%), Gaps = 81/475 (17%) Query: 33 FTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYA----GKTLRMTIG 87 T + + + D L SG K+FVF+ K +R+ +G Sbjct: 8 LTPFAIANAKPKPT--RYEISDGGHAGLRVIVQPSGIKSFVFRYKRGTGEAAKNVRIMLG 65 Query: 88 NI---NDWKIDDARAEARRLQTLIDTGIDP----RIAKAVKIAEAESLQAESRKTKVTFS 140 + AR A + L TG DP R+ +A +A + + E+R+ T + Sbjct: 66 RAAGPGALTLRQAREAADSHRRLKLTGADPADQRRVERAANLARIRAEEIENRRKDDTVA 125 Query: 141 VAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLP 200 + E Y + G+ + R L+ Sbjct: 126 LVLERYFKSHVNGLLS-------------------------ARETKRILTRELSGWARRR 160 Query: 201 LSELTPDYIAAWLSTERQN-RPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVR 259 + ++ L ++ +P + F KW + + + Sbjct: 161 IDHVSRADAVKLLEAIQERDKPILANRTRAHASKFFKWCIEKGLLE--------INPFEH 212 Query: 260 KMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVD 319 D L +L+ A L P Y+ VLL+ G RREE+A +RW +D Sbjct: 213 TTRAAKEIARDRVLSDAELRILLLANDRLEWPW-REYIAVLLMLGQRREEVAGMRWDALD 271 Query: 320 FK-----WSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDV-------NKEGWVFRS 367 W + K +PL V +L + + +++ + +VF + Sbjct: 272 LDCAEPVWLMAASRYKNGQPHAVPLPAAVVSILRSIGRMHFTEIIDGAPTLKESPFVFTT 331 Query: 368 NSKSG-------KIIEPRSAHNRALVLAELPH----------ISLHGLRRSFGTLAEWVE 410 ++ K+ H A A+ LH LRR+ T ++ Sbjct: 332 TGRTAISGFSKAKVQLTGIMHEIACGEAKARGESTATIEKIEWRLHDLRRTMATTMARLK 391 Query: 411 VPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWILNEAGITIKNNVDM 465 + + +++GHK + + R D L + + W + A I ++ Sbjct: 392 INVVTIERVLGHKMQGVMAVYQRY---DYLPEKLHALTVWNDHIARIVAPQQSNV 443 >UniRef50_B6ALQ5 Integrase n=1 Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6ALQ5_9BACT Length = 367 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 65/382 (17%), Positives = 121/382 (31%), Gaps = 72/382 (18%) Query: 71 FVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQA 130 + + + GK +R IG DA+ R++ I G Sbjct: 20 WWVRYTWQGKEIRRKIGRK-----TDAKNYYARVRAQILEGR----------------YE 58 Query: 131 ESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSA 190 + VT +Y++ + T +S +R Y+ + Sbjct: 59 PEKPRVVTLGAWLGEYMETV-TSVSLSQQRGYAKFWTN---------------------- 95 Query: 191 GPLASLLNLPLSELTP---DYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGI 247 +L P++ + + I L + P+ + L+ + G+ Sbjct: 96 ----TLGGRPIASIKTAELERIQVSLREAGKLAPSTINRHFAFLKHTFNIALR----DGL 147 Query: 248 IPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARR 307 I + + + K L + + P Y+++ + TG R+ Sbjct: 148 IKENPVKGVHFFKEP----KGRTVFLSEADEAKLKESFSPEYWP----YVELAIHTGLRQ 199 Query: 308 EEIASLRWSDVDFKWSSMRIKDKIEG-ERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFR 366 E +LRW ++D + + G R +PL +L L V WVF Sbjct: 200 SEQFNLRWENIDMTSRVLTVPVSKSGLTRHVPLNDTALAVLRDLKARQ---VILSPWVFP 256 Query: 367 SNSKSGKIIEPRSAHNR----ALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGH 422 S K + + + + A+ A L + H LR +F + VP V ++ GH Sbjct: 257 SPVDHTKPRDGNAFYKKVFVPAIEKAGLSGVVWHTLRHTFCSRLVQAGVPLTTVQKLAGH 316 Query: 423 KPSALAEKHYRRRPLDLLRKWH 444 K + Y D L + Sbjct: 317 KDYSTTL-IYAHLSPDHLHEAV 337 >UniRef50_B7UT12 Predicted P4-family integrase n=26 Tax=Enterobacteriaceae RepID=B7UT12_ECO27 Length = 411 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 81/422 (19%), Positives = 149/422 (35%), Gaps = 50/422 (11%) Query: 38 LRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVF----------QSVYAGKTLRMTIG 87 L + K + +V L R + ++A+V + L M +G Sbjct: 11 LSGLVVSRLKSEGMYAVGNVDGLYLRIRNQSRAWVLCVAMGTRINNLGRTVPRRLNMGLG 70 Query: 88 NINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYL 147 + + +AR +AR L+ I GI+P K + A E L + K TF+ E+ L Sbjct: 71 PYPEVSLAEARDKARELRKQIRNGINPLQEKHEQKARQEIL----ARKKKTFAECCEEVL 126 Query: 148 QELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPD 207 + + + K + + + +SE+T Sbjct: 127 EVKDSEMKNKKHLAQWRSTLETY---------------------AYPFIGKKAVSEITKV 165 Query: 208 YIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSAS 267 + A L + + + I ++ ++ ++G P P Sbjct: 166 DLLAILEPIWLTKNETASRLRGRIETVIDYAKAKEYFEGDNPAAWKGMLKPLLPQPSKVQ 225 Query: 268 --KADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSM 325 K L Q+ S+ +R + ++ L+ +LT AR EI WS++D + + Sbjct: 226 ITKHHAALPYNQIGSFMKELRERSG-VSPRALEFAILTAARSGEIRGAEWSEIDLEGKTW 284 Query: 326 RI---KDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHN 382 I + K E +PL+ LL L + +VF + K G++ + +A Sbjct: 285 TIPASRMKAAKEHRVPLSDAAVALLKALPRFKGIS-----FVFPATRK-GQLSD--TALL 336 Query: 383 RALVLAELPHISLHGLRRSFGTLA-EWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLR 441 L ++ HG R +F A E P ++ + H+ + AE Y+R L R Sbjct: 337 AVLKRMGYTDLTQHGFRSTFRDWAGETTNYPREVIEHALAHQLADKAEAAYQRGTLWPKR 396 Query: 442 KW 443 Sbjct: 397 VA 398 >UniRef50_A8MGP9 Integrase family protein n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MGP9_ALKOO Length = 369 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 61/368 (16%), Positives = 119/368 (32%), Gaps = 41/368 (11%) Query: 107 LIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRY 166 ++ ID + K + Q E+ K + + T R Y + Sbjct: 14 IVVDSIDENGKRKRKWISGFNTQKEAEKKLP---EILQQLNTNTFVDTNNITLRDYMQLW 70 Query: 167 IADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTE--RQNRPTVT 224 + D+ + K + L N+ L ++ P +I ++ P+ Sbjct: 71 LEDYAKPNVAPTTYDKYTYAANKVSEI--LGNMKLQQIKPIHIQQLVNKLNNSDVTPSTV 128 Query: 225 AHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSA 284 YR+L I K+Q I + V P + L +++++ Sbjct: 129 LSYYRVLNTAIN---QAVKWQ-FIQYNPC----VAVTPPRNTKNKMMILDQDEIQILLDK 180 Query: 285 VRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI---------------KD 329 + + + + LL G RR EI L+W ++DF + + Sbjct: 181 SKDH---VLYPVIVLALLCGLRRGEILGLQWENIDFFSGVIHLENNLVMANNESILKETK 237 Query: 330 KIEGERIIPLTP-------YVSELLNVLAQSPNSDVNKEGWVFR-SNSKSGKIIEPRSAH 381 G R + ++ V + S + +V + + + A Sbjct: 238 TSTGRRAVDISSNVVEVLKKVKKQKMSYKLLYGSSYHDSNFVCTWEDGRPFRPDYIPKAF 297 Query: 382 NRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLR 441 + LV A LP I H LR + ++ + +V + +GH ++ Y L + Sbjct: 298 AKILVSANLPKIRFHDLRHTHASILLKSGIHPKVVQERLGHSSISITLDTYSHLVPSLQK 357 Query: 442 KWHEKIET 449 EK+ T Sbjct: 358 SAAEKMAT 365 >UniRef50_C2E2T4 Bacteriophage integrase n=5 Tax=Lactobacillus RepID=C2E2T4_LACJO Length = 386 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 53/290 (18%), Positives = 103/290 (35%), Gaps = 42/290 (14%) Query: 193 LASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDL 252 L L L + +++ L+ + P + Y L + ++ + DL Sbjct: 106 LPVLGELYVEKISTFRCQKALNKWFSDLPKMYRKVYSLSSKVLDYA---------VNNDL 156 Query: 253 AQDYNVRKMVPVSASKADD----CLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARRE 308 +++++ K KE+L + A + NP + ++L TG R+ Sbjct: 157 IVKNPMKRVIKPKMQKDKREFTNFYSKEELNKYLDACKQKKNPRVYLFFRLLAYTGMRKG 216 Query: 309 EIASLRWSDVDFKWSSMRI----------------KDKIEGERIIPLTPYVSELLNVLAQ 352 E +L+WSD+DF+ ++RI R I + L + Sbjct: 217 EALALKWSDIDFENETIRINKTLSLGTHNSLVIGTPKTKASNRTIQVDEQTIYYLQEWRK 276 Query: 353 SPNSDVNKEGW--------VFRSNSKSGKIIEPR---SAHNRALVLAELPHISLHGLRRS 401 ++ K G+ +F ++ + ++I P + A L HI++HG R + Sbjct: 277 RQRKELFKVGFNALTDDQLLF--SNGNNQLIRPWLVQYWNKTIAKDARLKHITVHGFRHT 334 Query: 402 FGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWI 451 +L P V + +GH Y +K EK ++ Sbjct: 335 HASLLFEAGTPMQDVKERLGHSDITTTMNVYTHVTKSEKKKTAEKFARFM 384 >UniRef50_B2KEQ8 Integrase family protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KEQ8_ELUMP Length = 337 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 71/369 (19%), Positives = 116/369 (31%), Gaps = 68/369 (18%) Query: 70 AFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQ 129 + Y K+ R + A R++ T I G Sbjct: 10 TWGIDYRY--KSKRYK--RVVAITRKLALDIERKILTDIKEGK---------------FF 50 Query: 130 AESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTS 189 + K VTF+ E Y Y T Sbjct: 51 PDLDKQDVTFAEIAERYWSLHGRKTRGAQTFKY-------------------------TF 85 Query: 190 AGPLASLLNLPLSELTPDYIAAWL-STERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGII 248 L+ ++ ++++T + I + T + P+ + L RA I + K Y+G Sbjct: 86 DIILSRFGHMKVADITTEDIQKFYNDTWERTSPSTANRHFSLFRAIINKALNLKLYKGQN 145 Query: 249 PGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARRE 308 P + + D KE +KS + P + +LTG R+ Sbjct: 146 PC-------IGVVRQRDNPPRDKYFTKEDIKSLLVTAENRLKP----IIAFAVLTGCRKM 194 Query: 309 EIASLRWSDVDFKWSSMRIKDKIEGE-RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRS 367 EI +LRW DVDF +RI G+ R IPL + +L + +P VF Sbjct: 195 EILNLRWKDVDFYGGIIRITMSKSGKPREIPLANDLRPILLAMHTNPQDK------VFNI 248 Query: 368 NSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSAL 427 + K N+ L H R +F +L + + +I+GH L Sbjct: 249 TVPALKYS-----FNKLLKKLGFEGYCFHTCRHTFASLYMQNDGNITDLQRILGHATIEL 303 Query: 428 AEKHYRRRP 436 ++ P Sbjct: 304 TMRYSHFSP 312 >UniRef50_B8D1P6 Phage integrase family protein n=1 Tax=Halothermothrix orenii H 168 RepID=B8D1P6_HALOH Length = 391 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 66/374 (17%), Positives = 122/374 (32%), Gaps = 40/374 (10%) Query: 105 QTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYST 164 Q + G DP+ K + + E K + + S + Sbjct: 19 QGAVTIGTDPQTGKQKRKYFYGKTKKEVAKKMTELKMKL---FNGTYSEPSEMKLIDWLH 75 Query: 165 RYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRP--- 221 R+I + + + + L +L + L+ + + Sbjct: 76 RWIEGRKSTLAYSTYRNYKVMINNHLA--DDIGETKLKDLKARQVQELLNDKLEKGKVYG 133 Query: 222 --TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLK 279 ++ + + + + + Q + +IP ++ + V K K K+Q+ Sbjct: 134 EGGLSPRTVKYIYSTLHTALEQAVKENMIPRNICKAVEVPK---KQEEKKLHTWNKKQVN 190 Query: 280 SWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIK----------- 328 + A R I + L TG RR E+ L+W D+D + + +K Sbjct: 191 IFLKAARDYKYFI---LHYLALNTGMRRGELLGLQWKDIDMEKKRIEVKRQLARTDEGLI 247 Query: 329 ----DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVF------RSNSKSGKIIEPR 378 G R IP+T V L G + +++ G I+PR Sbjct: 248 FKKVKTKSGNRTIPITDNVVRELKRHQIKQGEKRLALGEAYNKKADLVASNGIGNPIDPR 307 Query: 379 SA---HNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRR 435 + + LP I H LR +F TL + P + QI+GH + Y Sbjct: 308 NLVRDFKDIIEETGLPEIRYHDLRHTFATLFLEAKGPIKTLQQILGHSSITVTIDTYSHV 367 Query: 436 PLDLLRKWHEKIET 449 ++L + K+ET Sbjct: 368 TEEMLIEAERKMET 381 >UniRef50_B4W813 Site-specific recombinase, phage integrase family protein n=2 Tax=Brevundimonas RepID=B4W813_9CAUL Length = 525 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 86/446 (19%), Positives = 148/446 (33%), Gaps = 62/446 (13%) Query: 43 LPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTI-GNINDWKIDDARAE 100 L K+ + L+ R SG F + G R TI G+ + DAR + Sbjct: 15 LKPLDKRYERRVSGARGLSVRVWPSGLTQFEVRYAVGGGPRRRTILGDYPAVSLADAREK 74 Query: 101 ARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKR 160 A L+ + G+DP + + T E Y G+ +R Sbjct: 75 ATALRLDVLKGVDPVAERIAA--------QRPAPPQETLDQVAETYWAASELGLHGGRRR 126 Query: 161 PYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNR 220 P R IA+ +L R + P L + L TER Sbjct: 127 PKRPRTIANERHLWQRHISASLGATAP-----------RDLKRVEVKTFMRSLVTERHLS 175 Query: 221 PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKS 280 A LL + + + ++ + V P++ D L LK Sbjct: 176 AASAASIGGLLHSILAYCVQEELVDA--------NPVVGLARPLALVSRDRLLDDAGLKL 227 Query: 281 WFS----------------AVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFK--- 321 + + + P+ + +Q+L+LT RR E+A R ++ D Sbjct: 228 VWDIVLDGAQPRPPGYLNIGLAARPEPVMALAIQLLMLTLTRRNEVAGARKAEFDLDAGL 287 Query: 322 WSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIE---PR 378 W + K + ++PL+P +L + +VF S + + I+ Sbjct: 288 WVIPAERAKANHQHVVPLSPQALNVL----TEAFALDPASPFVFPSPRVADQCIDEQAIT 343 Query: 379 SAHNRALVLAELPHISLHGLRRSFGTLAE-WVEVPTGIVAQIMGHKP---SALAEKHYRR 434 +R +LP S H +RR+ T V IV ++GH P +A+ + R Sbjct: 344 RTFSRIFERRKLPLRSPHDVRRTGATTLTGRYGVTRFIVGLVLGHTPKDGAAVTAVYDRY 403 Query: 435 RPLDLLRKWHEKIETWILNEAGITIK 460 + R + W + G+ + Sbjct: 404 TYVPEKRDALVR---WAGHLTGVPVG 426 >UniRef50_Q93SE7 Integrase n=181 Tax=root RepID=Q93SE7_ECOLX Length = 394 Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 72/397 (18%), Positives = 134/397 (33%), Gaps = 44/397 (11%) Query: 65 TSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAE 124 T+G+K + + +AGK ++IG D + DAR + + L+ G DP AK + Sbjct: 32 TNGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKLLAAGGDPGEAKKEEKI- 90 Query: 125 AESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRG 184 A+ K TF ++ Q S + + + D Sbjct: 91 -----AQQMSLKNTFEAIAREWHQSKADRWSLRYRDEIIDTFEKD--------------- 130 Query: 185 QGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYR-LLRAFIKWSNYQKK 243 + P++E+ P + L + R +++ + Sbjct: 131 -------IFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGR 183 Query: 244 YQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNP-IASAYLQVLLL 302 DLA K V L +L + + + I Q+++L Sbjct: 184 ADYNPAPDLASALATPKKVHFP------FLTANELPHFLNDLAGYTGSIITKTATQIIML 237 Query: 303 TGARREEIASLRWSDVDFKWSSMRIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVN 359 TG R +E+ RW D+DF+ I K++ I+PL+ V L L Sbjct: 238 TGVRTQELRFARWEDIDFETKLWEIPAEVMKMKRPHIVPLSEQVIMLFKQLE----PISK 293 Query: 360 KEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQI 419 VF + K I S + +L ++ HG R + T+ + + Sbjct: 294 HHPLVFIGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQ 353 Query: 420 MGHKP-SALAEKHYRRRPLDLLRKWHEKIETWILNEA 455 + H +++ + LD R+ + +I + + Sbjct: 354 LAHVDKNSIRGTYNHALYLDGRREMMQWYADYIDSLS 390 >UniRef50_A3VU58 Putative uncharacterized protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VU58_9PROT Length = 388 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 87/433 (20%), Positives = 151/433 (34%), Gaps = 66/433 (15%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYA---GKTLRMTIG 87 KFT + R E T L+D +V L + ++ + G+ + + IG Sbjct: 3 TKFTQGLVDRAR-DEHPAGTQLYDTEVRGLRLVIGKRSSSYKLVTSVNDGTGRAVSLMIG 61 Query: 88 NINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYL 147 N+ + AR +A + G DPR+ K T A E YL Sbjct: 62 RANEVSLRTARQQAIEANVMARRGEDPRLRKD---------------GIPTLRQALEKYL 106 Query: 148 QELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPD 207 + + KT + Y + + PLA + +LP+ L Sbjct: 107 KARGDDLRPKTHQSYKSLTVGP--------------------KAPLAKIGDLPMHLLDRQ 146 Query: 208 YIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSAS 267 A + R TA+ DL + R + Sbjct: 147 TCAKLHEELAEKRGPATANGALR-------LARLLLNDVARVYDLPPNPVTRGVRFAKDR 199 Query: 268 KADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI 327 D + E + + ++ + ++ Q +L+TG R E S+RW+++D + + Sbjct: 200 TRDWAVPLEGMPTLWARLDAMEKVKKRLCWQTMLMTGLRSNEARSMRWANLD-DQGVLLV 258 Query: 328 KDKIEGERI---IPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRA 384 GE +P+ + E L VL K +VF + +++G I + Sbjct: 259 PSPKGGEERAFRVPIPWSLIEDLGVLR-------GKSEFVFPARTRTGYIDQ-------- 303 Query: 385 LVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPL-DLLRKW 443 L +E S H +R ++ TLA V ++ HK + ++ ++ R L LR Sbjct: 304 LKRSEKFPYSPHMMRHTYRTLALEAGVSVETAMILLNHKTNDISSRYVTRANLTGYLRGE 363 Query: 444 HEKIETWILNEAG 456 EK+ I AG Sbjct: 364 VEKVAATIRKAAG 376 >UniRef50_D2RA91 Site-specific tyrosine recombinase XerC n=10 Tax=Bifidobacteriaceae RepID=D2RA91_GARVA Length = 322 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 64/304 (21%), Positives = 116/304 (38%), Gaps = 36/304 (11%) Query: 169 DHINLSSRGGESKKRGQGPTSAGPLASLLNLP----LSELTPDYIAAWLSTERQNRP-TV 223 D++ + GE ++ LA N +SELT D + +W++ E ++ + Sbjct: 27 DYVRANKGLGERTQKAYASDILQCLA-WCNRHGFNNISELTTDDLRSWMADESRSHARSS 85 Query: 224 TAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFS 283 A +R F W + + G P ++ ++ M+P L + Q +S + Sbjct: 86 LARKVVAVRGFFAWCQHVEYISG-NPAEILMTSKIKNMLPS-------VLDEYQAESLMN 137 Query: 284 AVRSLNNP-------------IASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDK 330 V S N +A L++L TG R E+ SL D++F ++++ K Sbjct: 138 NVDSKANVSTSCPKNQKAVGLRNAAILELLYATGIRVGELTSLNIQDINFSSHTIKVTGK 197 Query: 331 IEGERIIPLTPYVSELLNVLAQSPNSDV----NKEGWVFRSNSKSGKIIEPRSAHNRA-- 384 +R++P + L+ ++ + E VF GK I+ R Sbjct: 198 GNKQRVVPFGVPAYKALSAWISKDGREILLRNSVEEAVFLGTR--GKRIDQRLVRQIVHD 255 Query: 385 -LVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKW 443 A +P IS H LR S T V +++GH +++ L RK+ Sbjct: 256 EAKSAHVPDISPHALRHSAATHMLNGGADLREVQELLGHSSLNTTQRYTHVSIESLKRKY 315 Query: 444 HEKI 447 + Sbjct: 316 SQAF 319 >UniRef50_A6AAK4 Integrase n=2 Tax=Vibrio RepID=A6AAK4_VIBCH Length = 455 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 80/457 (17%), Positives = 150/457 (32%), Gaps = 57/457 (12%) Query: 33 FTFERLRRFTLPEGKKQTFLWD-ADVTT---LACRA-TSGAKAFVFQSVYAGKTLRMTIG 87 T +++ K +LWD + L + TSG K FVF+ K ++IG Sbjct: 2 LTVTKIQS--ATSSKNSYYLWDQSGQRGTGRLGVKIFTSGKKQFVFRYYQHQKEKFISIG 59 Query: 88 ----NINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAW 143 + +AR +A L+ G DP++ + +E + + AES K+ T + Sbjct: 60 LFSARAGSMTLTEAREKAEVFSQLLLGGKDPKLHLEQQESEQKKIDAES-KSLGTIDELF 118 Query: 144 EDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSE 203 Y + + + + R P N + Sbjct: 119 HSYTE---------------------RMKIDGKRTYEDVRNALVREFYPYID-KNTKACD 156 Query: 204 LTPDYIAAWLSTERQNRP-TVTAHAYRLLRAFIKW---SNYQKKYQGIIPGDLAQDYNVR 259 +T D I +S Q T + + A + +Y + + V Sbjct: 157 VTTDDIKYVISMMIQRGAITQSNRVRSYVMAAFNHGMRFDNDPRYFSLESKFGIKYNPVA 216 Query: 260 KMVPVSASKA--DDCLQKEQLKSWFSAVRSLNN--PIASAYLQVL----LLTGARREEIA 311 + + + L+ +L+ +R + PI +L L G R E+ Sbjct: 217 SIPKQKDGERIGERFLEWRELRRLLKDLRENYDLVPIGQDLRHLLQLCIYLGGQRPYEVI 276 Query: 312 SLRWSDVDFKWSSM---RIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSN 368 +L W +VD++ + + + K + + I+PL E+L Q +VF + Sbjct: 277 TLEWWNVDWEERFVCITKERSKNKKDHIVPLNGLAFEIL----QKQYELSGGGRYVFPNP 332 Query: 369 SKSGKIIEPRSAHN---RALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPS 425 + + ++ S R LRR+ TL + + +I H Sbjct: 333 KDAEEPMKTSSICRAVTRYRDAVGFDKFVPKDLRRTCKTLMGACRISKEVRDRIQNHALQ 392 Query: 426 ALAEKHYRR-RPLDLLRKWHEKIETWILNEAGITIKN 461 ++ +HY R D E + + G Sbjct: 393 DVSTRHYDRYDYFDDKLGGLETWSSKLKELIGYVPPA 429 >UniRef50_D1R6D1 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R6D1_9CHLA Length = 464 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 80/461 (17%), Positives = 162/461 (35%), Gaps = 74/461 (16%) Query: 42 TLPEGKKQTFLWDADVTTLACRA-TSGAKAFVF-------QSVYAGKTL---RMTIGNIN 90 L +K ++ D+ V L R +G+K+++F + + + G Sbjct: 38 KLQPKEKPYYVRDSQVKGLVLRVKPTGSKSWIFCYTVPCHKRKWRERKKGLGCFKGGRTG 97 Query: 91 D--WKIDDARAEARRLQTLID-TGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYL 147 + AR EA R++ + G DP K + AE QA ++V +E + Sbjct: 98 VAGVSVKTARTEAERMKHEVRHNGADPVEDKRKRAAEVIREQA----SRVLVKDLFERWA 153 Query: 148 QELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPD 207 D +N +G E+++ + S+ L + E+ Sbjct: 154 N-------------------TDLVNRKDKGAEARRMMLKDV----IPSIGELNIKEVRKG 190 Query: 208 YIAAWLSTERQNRPTVTAHA-YRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSA 266 +I Q A + L+R +++ + ++ D + + + + Sbjct: 191 HITEITDQLLQRGVNRMAKVVFSLIRQMFRFAVTRD----LLEFDPTAAIS-KTTIGGAN 245 Query: 267 SKADDCLQKEQLKSWFSAVRSLN-NPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSM 325 + D L +++++ + S A+ + ++L T R E+ RWS DF Sbjct: 246 VERDRVLSEDEIQELGIKLSSAGMADTATIAIWLVLGTCCRIGELLKARWSHFDFNRKLW 305 Query: 326 RIKD---KIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHN 382 RI K + E II L+ + L L + + W F ++ + P++ Sbjct: 306 RIPSENSKNDREHIIFLSLFTFSLFTQL----KAITGEGEWCFPASRLDDHHVCPKTITK 361 Query: 383 ----RALVLAELPHIS--------------LHGLRRSFGTLAEWVEVPTGIVAQIMGHKP 424 R L L + + H LRR+ TL + V + + + H Sbjct: 362 QITDRQRSLPNLKNRTKNNAALMLSRGLWKPHDLRRTGATLMTALGVLPEVAERCLNHTE 421 Query: 425 SALAEKHYRRRPLD-LLRKWHEKIETWILNEAGITIKNNVD 464 ++ Y+R + ++ EK+ + G+T+ Sbjct: 422 ENRVKRIYQRHTYESEMKMAWEKLGNHLEKLTGVTLSLGAK 462 >UniRef50_C6MJ08 Integrase family protein n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MJ08_9PROT Length = 418 Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 84/445 (18%), Positives = 152/445 (34%), Gaps = 54/445 (12%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNI 89 K T +++ P+ K AD + +GAK + +A K + +G Sbjct: 1 MKLTDTAIKKAK-PQAKPYRI---ADGGGMYIEVKPNGAKYWRMAYRFADKQKTLALGVY 56 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 D + DAR + L+ G DP K + +A+ + S + Sbjct: 57 PDVTLADARDRRNEARKLLANGADPGAVKQSQKKQAKIAASNS--------------FEL 102 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT-PDY 208 + + +ST + AD I R N P+SE+ P Sbjct: 103 IAREFHSLKTPMWSTNHAADWIKTLER--------------EIFPKFGNYPISEIDAPAV 148 Query: 209 IAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 + A + E ++ V A + +RA ++ + + + A + + P K Sbjct: 149 LDAIRAIESRDAHEVAARVLQRVRAVCAYAIATGRAR----HNPASEIK-GALAPQPKIK 203 Query: 269 ADDCLQKEQLKSWFSAVRSLNN-PIASAYLQVLLLTGARREEIASLRWSDVDFK---WSS 324 L +++L + AV + P+ +L+LT R E+ +W + D W Sbjct: 204 HFAALTEKELPDFLRAVAAYPCYPLTKYATALLMLTFVRTGEVRGAKWCEFDLDAKLWKI 263 Query: 325 MRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRA 384 + K I+PL E+L L + +F + + +GK+I + Sbjct: 264 PAERMKSREPHIVPLAKQAIEILGEL----HPLTGHGEHLFPNRTGNGKVISENTVLKVI 319 Query: 385 LVLAELPHISLHGLRRSFGTLAEWVEV-PTGIVAQIMGHKPSALAEKHYRRRPLDLLRKW 443 L ++ HG R T V + ++ + H + Y R R Sbjct: 320 ERLGYKGRMTGHGFRTIASTYLNGVGMIRPDVIEAQLAHTEANATRAAYNRANYMEYRAA 379 Query: 444 HEKIETWILN----EAGITIKNNVD 464 ++ W EAGIT+ D Sbjct: 380 M--MQFWADTLDAMEAGITLPKWTD 402 >UniRef50_C3NUM0 Phage Integrase n=55 Tax=root RepID=C3NUM0_VIBCJ Length = 413 Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 84/428 (19%), Positives = 161/428 (37%), Gaps = 63/428 (14%) Query: 46 GKKQTFLWDADVTTLACRATSGAK-AFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRL 104 + + + AD L+ R + K F F+ + GK R+ IG K+ +AR E RL Sbjct: 14 KEAKETVVKADRDGLSARVSPKGKIVFQFRYRFDGKQQRVDIGTYPLMKLAEARNELDRL 73 Query: 105 QTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYST 164 + ++D G +P++ + A+ + Q +F + D++ + Y Sbjct: 74 RAVLDQGRNPKLYLQQERAKYSANQ--------SFESIFRDWIDSAGKQGLKEKTWHYQK 125 Query: 165 RYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVT 224 R ++ L L PL+++T + L ++ P+ T Sbjct: 126 RSSEIYL---------------------LPRLGKYPLTDITELSLRNCLREVSESSPSNT 164 Query: 225 AHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSA 284 +L F W ++ + + K K L +++ + Sbjct: 165 ERLVSVLHKFYDWLIDEQILEINAAAGITAKKVGGKK-----GKRTRVLNDNEIRILWRY 219 Query: 285 VRSLN-NPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIK--DKIEGERI----- 336 + Y+++LLL G R+ E+ D + + + + +GE+I Sbjct: 220 LHESKITEKNRIYIKLLLLLGGRKGELIQAEKHHFDLQSAMWTVPIEIRKQGEKIGAPIM 279 Query: 337 IPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSK--------SGKIIEPRSAHNRALVLA 388 PL EL+ + Q ++K ++F +N + I R + Sbjct: 280 RPLIKPAIELIELAMQ-----MSKSTYLFPANGQEELATNGFDTTIPNNVKIWARRSLGI 334 Query: 389 ELPHISLHGLRRSFGTLAEWVEVPTGIVAQIM-GHKPSALAEKHYRRRPLDLLRK----W 443 E+ H S+H LRR+ T + T VA++M GH L + + + LD +R W Sbjct: 335 EMEHWSMHDLRRTMRTRMSA--ITTQEVAELMIGHSKKGLDAIYNQYQYLDEMRHAYDVW 392 Query: 444 HEKIETWI 451 ++++ET I Sbjct: 393 YQQLETII 400 >UniRef50_Q1CP24 DNA integration/recombination/inversion protein n=7 Tax=Streptococcus RepID=Q1CP24_STRPF Length = 387 Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 64/375 (17%), Positives = 127/375 (33%), Gaps = 32/375 (8%) Query: 104 LQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYS 163 + I GID K VK + + E + + + ++ + KT + S Sbjct: 21 YRASIYLGIDQMTGKRVKTSITGRTRKEVNQKAKHAQLDFLSNGSTIKRKVVIKTFKELS 80 Query: 164 TRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTV 223 ++ + + P +L N+ + ++T I ++ + Sbjct: 81 HLWLETYKLTVKPQTYDATVTRLNRHIMP--TLGNMKVDKITASDIQMLINRLSKYYVNY 138 Query: 224 TAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFS 283 TA +R+ I+ Q G+I + A+D + + P + K + LKS+ Sbjct: 139 TA-----VRSVIRKVLQQGVLLGLIDYNSARDIILPRKQPNAKKKV-KFIDPSDLKSFLE 192 Query: 284 AVRSLNNPIASAYL-----QVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIE------ 332 + + + + Y Q+LL TG R E +L W D+D + ++ I Sbjct: 193 HLETSQHKRYNLYFDAVLYQLLLSTGLRIGEACALEWGDIDLENGTIAINKTYNKNLKFL 252 Query: 333 -------GERIIPLTPYVSELLNVLAQSPNSDVNKEGW-----VFRSNSKSGKIIEPR-S 379 G R+I + L + N+ G VF + ++ R S Sbjct: 253 STAKTQSGNRVISVDKKTLRSLKLYQMRQRQLFNEVGARVSEVVFATPTRKYFNASVRQS 312 Query: 380 AHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDL 439 A + A + + H R + +L + + +GH ++ Y D Sbjct: 313 ALDTRCKEAGIERFTFHAFRHTHASLLLNAGISYKELQYRLGHANISMTLDTYGHLSKDK 372 Query: 440 LRKWHEKIETWILNE 454 ++ E + N Sbjct: 373 EKEAVLYYEKAMNNL 387 >UniRef50_Q1MRZ7 Prophage DLP12 integrase (Fragment) n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=Q1MRZ7_LAWIP Length = 388 Score = 158 bits (398), Expect = 5e-37, Method: Composition-based stats. Identities = 66/401 (16%), Positives = 143/401 (35%), Gaps = 61/401 (15%) Query: 64 ATSGAKAFVFQSVYAGKTLRMTIGN--INDWKIDDARAEARRLQTLIDTGIDPRIAKAVK 121 A+ K + GK + +G I+D A+A R+++ + G + K Sbjct: 32 ASGSEKVYYVVFKKNGKVIEEKVGRQFIDDMTP----AKASRIRSELIEGK-----RKTK 82 Query: 122 IAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESK 181 E A S + + WE+Y + + ++ + Sbjct: 83 KLAKEEALAASLRKNIH--GIWEEYAKGRPKNKNTDIDLCRYELHLKNIFGHKFP----- 135 Query: 182 KRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNR--PTVTAHAYRLLRAFIKWSN 239 E+T + + + Q+ P + LLR +++ Sbjct: 136 --------------------EEITTNDVRIFKDNLIQSGKSPQTVLNTLALLRRILRFGE 175 Query: 240 YQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQV 299 L + +P + + L + QLK+ A+ + + + ++ L++ Sbjct: 176 KNGF------CTLPDRSQLVFEMPKVDNIKTENLTETQLKALMEALDAETDQVMASCLRL 229 Query: 300 LLLTGARREEIASLRWSDVDFKWSSMRIKD---KIEGERIIPLTPYVSELLNVLAQSPNS 356 L+TG R+ + +L W+D+DF+ + ++ K IP++ +L L + Sbjct: 230 ALVTGMRKGALLALEWTDLDFEQGIITLQGKSAKKGKTAYIPMSEAAKIILEKLPHTSR- 288 Query: 357 DVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELP-HIS-LHGLRRSFGTLAEWVE-VPT 413 +VF N+K K + RS NR A+LP HGLR ++ + V Sbjct: 289 ------YVFP-NTKGEKRSDFRSMPNRIKQKAQLPADFRPFHGLRHTYASHLASSGKVDL 341 Query: 414 GIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWILNE 454 + +++ H + ++ Y + +++ + + + Sbjct: 342 YTLQKLLTHSSPQMTQR-YAHLADEAMKRAARVADDILTSN 381 >UniRef50_C4XTG1 Site-specific recombinase n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XTG1_DESMR Length = 409 Score = 158 bits (398), Expect = 5e-37, Method: Composition-based stats. Identities = 60/385 (15%), Positives = 114/385 (29%), Gaps = 48/385 (12%) Query: 69 KAFVFQSVYAGKTLRMTIGNIND-WKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAES 127 + F + GK + IG ++ W +DA ++ I G P+ + + A Sbjct: 28 RYFSIRYRCRGKNMEEGIGWASEGWTAEDASRILGEIRQNIRRGTGPQSLRDMARAARGE 87 Query: 128 LQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGP 187 A + +TF YL + + K + Sbjct: 88 ADA-AEAAPLTFGELARRYLD-----WAKRNKSSWKEDEY-------------------L 122 Query: 188 TSAGPLASLLNLPLSELTPDYIAAWLSTERQNR---PTVTAHAYRLLRAFIKWSNYQKKY 244 + L + P + LT + P H ++R W+ Sbjct: 123 LAKRVLPLFAHRPATSLTRTDTEQFRDALLDAGGLSPMTIKHHLVVIRRVYNWAASTPVA 182 Query: 245 QGIIPGDL-AQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLT 303 ++ +P+ ++ L +E+ A P + + LLT Sbjct: 183 DDPGHMLFEGRNPVSGIRMPLVDNERIRFLTREEADRLLEAAGE-RLPEMHDIILLALLT 241 Query: 304 GARREEIASLRWSDVDFKWSSMRIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNK 360 G RR+EI L W DVD + I + + R L + +L + S Sbjct: 242 GMRRQEILGLMWQDVDLVNRIISIPARLTRAKRSRKAFLDEETAAMLQARREHAQS---- 297 Query: 361 EGWVFRSNSKSGK-IIEPRSAHNRALVLAEL--------PHISLHGLRRSFGTLAEWVEV 411 +VF + + + L + H LR +F + Sbjct: 298 -PFVFPGAVDGRRDPDHVTRQFDALVNGIGLNNGVTDPKHKVVFHTLRHTFASWLAQAGA 356 Query: 412 PTGIVAQIMGHKPSALAEKHYRRRP 436 + ++ GHK + +++ P Sbjct: 357 DIHHLMELTGHKSISTMQRYAHLMP 381 >UniRef50_A9IGA6 Phage-related integrase n=50 Tax=root RepID=A9IGA6_BORPD Length = 657 Score = 158 bits (398), Expect = 6e-37, Method: Composition-based stats. Identities = 75/428 (17%), Positives = 149/428 (34%), Gaps = 58/428 (13%) Query: 47 KKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQT 106 K+ L+D D +L A +G K+++F+ + GK RM +G + +ARAE + Q Sbjct: 29 GKRYTLYDNDCLSLMVSA-AGGKSWMFRYSWLGKQKRMALGGYPALSLREARAERDKAQA 87 Query: 107 LIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRY 166 LI GIDP+I + + A + TF ++ +++ R + + S Sbjct: 88 LIARGIDPQIERDQRR------HAAKLAGEYTFKNVFDAWVEHRRKELKEGRQSTLS--- 138 Query: 167 IADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTAH 226 + + L +L + + ++ + L+ + + TA Sbjct: 139 ----------------QILRIFNKDVLPTLGKMSIYDIRRPQLLGVLAAIEKRKAFTTAE 182 Query: 227 AYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMV---PVSASKADDCLQKEQLKSWFS 283 R W N +Y +I L + V P + L +L + Sbjct: 183 KVR------TWFNQMFRYALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPELPEFLQ 236 Query: 284 AVRSLNNPIASAYL--QVLLLTGARREEIASLRWSDVDFKWSSMRIK----------DKI 331 +R N L ++L LTG R E+ D I + Sbjct: 237 KLRRYNPRGWQTQLGVRLLFLTGVRTGELRLAEPEQFDLDRGFWIIPPEVVKQLQDEMRK 296 Query: 332 EGER-------IIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRA 384 G+R I+PL+ E++ L + ++ S+ K I + + Sbjct: 297 AGKRPQDVPPYIVPLSLQAIEIVRYLLGVMRP---AQKYLLSHRSELKKRISENTLNKAV 353 Query: 385 LVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSA-LAEKHYRRRPLDLLRKW 443 ++ ++ HG+R + T + P V + H ++ + + ++ R+ Sbjct: 354 QLMGYEGRLTGHGIRGTISTALNEIGYPKIWVDAQLSHSDPNKVSSAYNHAKYVEPRRRM 413 Query: 444 HEKIETWI 451 + + Sbjct: 414 MQDWADRL 421 >UniRef50_P76542 Putative prophage CPZ-55 integrase n=6 Tax=Enterobacteriaceae RepID=INTZ_ECOLI Length = 402 Score = 158 bits (398), Expect = 6e-37, Method: Composition-based stats. Identities = 65/430 (15%), Positives = 137/430 (31%), Gaps = 48/430 (11%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTI 86 +S+ T + + K L D+ L +G+K + F+ + I Sbjct: 1 MSKTPLTAKAIDAAQ--PQDKPYKLTDSLTPGLFLLVHPNGSKYWRFRYWLNKREFLQAI 58 Query: 87 GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDY 146 G + +AR A ++LI GI+P + ++ F ED+ Sbjct: 59 GVYPLITLKEARRRATESRSLIANGINP------VEQARKEKAIDALNMAAGFKKVAEDW 112 Query: 147 LQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTP 206 G S + + D L + ++T Sbjct: 113 FATRVGGWSESYAKQVRSALEKDVY----------------------PVLGKRSIVDITA 150 Query: 207 DYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSA 266 + A L + + P R + K++ + ++ + D + + Sbjct: 151 RDVLALLQKKERTAPEQARKLRRRIGEIFKFAVITE----LVTRNPVADLDTA--LKARR 204 Query: 267 SKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMR 326 + + ++ +++ A+ + +++L+LT R E+ RW ++ + +++ Sbjct: 205 PGHNAWIPISEIPAFYKALERAGSVQIQTAIRLLILTALRTAELRLCRWEWINLEDATIT 264 Query: 327 IK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNR 383 + K ++PL+ ELL Q + +VF + SA + Sbjct: 265 LPAEVMKARRPHVVPLSRQAVELL----QDQFTRSGYSAFVFPGRFMDKPLS--ASAILK 318 Query: 384 ALVLAELPHI-SLHGLRRSFGTLAEWVE-VPTGIVAQIMGHKPSALAEKHYRRRPLDLLR 441 AL I + HG R +F T + + H P + + + L R Sbjct: 319 ALERIGYKSIATGHGWRTTFSTALNESGRYSPDWIEIQLAHVPKGIRGVYNQAAYLKQRR 378 Query: 442 KWHEKIETWI 451 + I Sbjct: 379 AMMQDYADAI 388 >UniRef50_A3M3W1 Phage integrase n=4 Tax=Acinetobacter baumannii RepID=A3M3W1_ACIBT Length = 401 Score = 158 bits (398), Expect = 6e-37, Method: Composition-based stats. Identities = 75/423 (17%), Positives = 152/423 (35%), Gaps = 65/423 (15%) Query: 55 ADVTTLACRATSGAK-AFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGID 113 AD +++ R + K F + +AGK R+ +G + DAR +A +++L+D G++ Sbjct: 23 ADRDSMSVRISPKGKIVFQLRYRFAGKAERLDLGTYPHMSLKDARIKAGEMRSLLDKGMN 82 Query: 114 PRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINL 173 P++ +Q + TF + D+ + + KT H+ Sbjct: 83 PKVEVR--------VQQQKYIDASTFEEVFNDWYESY--CLKKKTSAQQIKNTFEQHV-- 130 Query: 174 SSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRA 233 + + +LP+ +T A L P++ + Sbjct: 131 -------------------IPEVGDLPVDRITLQQWLALLEELADEVPSIADRVLTNAKQ 171 Query: 234 FIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNN-PI 292 +KW+ ++ ++ ++ D ++ + + ++ L E++K A+ N P Sbjct: 172 VLKWAKKRQ----LLEVNVLSDIYAKEDLGIERNRGTRFLSDEEIKMVLMAIEESNILPK 227 Query: 293 ASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIK------DKIEGERII-PLTPYVSE 345 +L++ L+ G R E+ + +D D + K G II P+ P + Sbjct: 228 NKIFLKLCLMFGCRNGELRKAKKTDFDLNRKVWIVPVVNNKTGKKTGREIIRPILPEMEA 287 Query: 346 LLNVLAQSPNSDVNKEGWVFRSNSKSGKIIE------PRSAHNRALVLAE--LPHISLHG 397 L+ + + + ++S+ + P R + + H SLH Sbjct: 288 LI-----VEAFEYSSCEYFLTNDSEETPMSHGSSNSLPAYLMERLRRHHDYYMKHWSLHD 342 Query: 398 LRRSFGTLAEWVEVPTGIVAQIMGHKPSAL--AEKHYRRRPLDLLRKWHEKIETWILNEA 455 LRR+ T + ++GH S +Y + L + E WI Sbjct: 343 LRRTARTN-FSAFTSRDVAQLMIGHVMSGEQGTYDYY-----EYLPQQTEAYAKWIEKLK 396 Query: 456 GIT 458 IT Sbjct: 397 TIT 399 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P71298 Putative prophage CP4-6 integrase n=7 Tax=Proteo... 463 e-129 UniRef50_A4LPJ2 Phage integrase n=2 Tax=Burkholderia pseudomalle... 334 3e-90 UniRef50_B7D090 Phage integrase family protein n=1 Tax=Burkholde... 330 6e-89 UniRef50_Q6ARX0 Related to integrase n=5 Tax=Proteobacteria RepI... 321 5e-86 UniRef50_C6MHB2 Integrase family protein n=1 Tax=Nitrosomonas sp... 318 3e-85 UniRef50_Q2SV18 Phage integrase n=20 Tax=Betaproteobacteria RepI... 316 1e-84 UniRef50_UPI00003841F3 COG0582: Integrase n=1 Tax=Magnetospirill... 314 4e-84 UniRef50_Q82XM2 Phage integrase n=1 Tax=Nitrosomonas europaea Re... 313 8e-84 UniRef50_C6BFQ2 Integrase family protein n=4 Tax=Betaproteobacte... 311 4e-83 UniRef50_A1WB37 Phage integrase family protein n=5 Tax=Burkholde... 307 5e-82 UniRef50_C0GWH6 Integrase family protein n=3 Tax=Desulfonatronos... 306 1e-81 UniRef50_Q1NPW4 Phage integrase n=5 Tax=Deltaproteobacteria RepI... 305 2e-81 UniRef50_C1SPM2 Site-specific recombinase XerD n=1 Tax=Denitrovi... 301 4e-80 UniRef50_A8LM37 Integrase family protein n=3 Tax=Rhodobacterales... 301 5e-80 UniRef50_Q1GLB2 Phage integrase n=12 Tax=Rhodobacterales RepID=Q... 300 6e-80 UniRef50_A1AUY6 Phage integrase family protein n=2 Tax=Desulfuro... 299 1e-79 UniRef50_Q93SE7 Integrase n=181 Tax=root RepID=Q93SE7_ECOLX 298 4e-79 UniRef50_C5SDM2 Integrase family protein n=1 Tax=Allochromatium ... 294 4e-78 UniRef50_D0S9N1 Phage integrase n=1 Tax=Acinetobacter johnsonii ... 292 1e-77 UniRef50_A1B6Q9 Phage integrase family protein n=1 Tax=Paracoccu... 292 1e-77 UniRef50_B5K270 Integrase n=1 Tax=Octadecabacter antarcticus 238... 292 2e-77 UniRef50_Q3J8Z8 Phage integrase n=2 Tax=Nitrosococcus oceani Rep... 291 4e-77 UniRef50_Q3SUE5 Phage integrase n=6 Tax=Alphaproteobacteria RepI... 291 5e-77 UniRef50_C9NQJ4 Phage integrase n=6 Tax=Gammaproteobacteria RepI... 290 8e-77 UniRef50_A5W5R9 Phage integrase family protein n=2 Tax=Pseudomon... 290 8e-77 UniRef50_C6RMM9 Integrase n=1 Tax=Acinetobacter radioresistens S... 289 1e-76 UniRef50_B3T0I4 Putative Phage integrase family protein n=2 Tax=... 289 2e-76 UniRef50_C9CXZ5 Phage integrase n=1 Tax=Silicibacter sp. TrichCH... 289 2e-76 UniRef50_B8J055 Integrase family protein n=3 Tax=Desulfovibrio R... 289 2e-76 UniRef50_B7KUI7 Integrase family protein n=1 Tax=Methylobacteriu... 288 3e-76 UniRef50_A5CCP8 Phage-related integrase n=25 Tax=Orientia tsutsu... 287 6e-76 UniRef50_Q1RJE3 Integrase n=9 Tax=Rickettsia RepID=Q1RJE3_RICBR 286 9e-76 UniRef50_A1ATP4 Phage integrase family protein n=2 Tax=Desulfuro... 286 1e-75 UniRef50_Q1NM52 Phage integrase n=1 Tax=delta proteobacterium ML... 286 2e-75 UniRef50_A3VAJ4 Site-specific recombinase, phage integrase famil... 285 2e-75 UniRef50_A3V904 Phage integrase n=5 Tax=Rhodobacteraceae RepID=A... 285 3e-75 UniRef50_C6MJ08 Integrase family protein n=1 Tax=Nitrosomonas sp... 284 3e-75 UniRef50_P76542 Putative prophage CPZ-55 integrase n=6 Tax=Enter... 284 5e-75 UniRef50_B8ERI0 Integrase family protein n=1 Tax=Methylocella si... 283 8e-75 UniRef50_C8QZM9 Integrase family protein n=1 Tax=Desulfurivibrio... 283 1e-74 UniRef50_Q5LLE0 Site-specific recombinase, phage integrase famil... 282 1e-74 UniRef50_Q5P749 Similar to phage-related integrase n=3 Tax=Bacte... 282 1e-74 UniRef50_D2L516 Integrase family protein n=1 Tax=Desulfovibrio s... 282 2e-74 UniRef50_B4RZR6 Prophage CP4-like integrase n=2 Tax=Proteobacter... 282 2e-74 UniRef50_A5I9N5 Integrase, phage related n=12 Tax=Legionella Rep... 282 2e-74 UniRef50_B5KC37 Putative phage-related integrase n=1 Tax=Octadec... 281 3e-74 UniRef50_A4JAY4 Phage integrase family protein n=22 Tax=Bacteria... 281 4e-74 UniRef50_Q12DC0 Phage integrase n=1 Tax=Polaromonas sp. JS666 Re... 281 4e-74 UniRef50_B7I7W7 Integrase n=4 Tax=Pseudomonadales RepID=B7I7W7_A... 280 6e-74 UniRef50_D2LJU9 Integrase family protein n=1 Tax=Rhodomicrobium ... 280 1e-73 UniRef50_C0GR55 Integrase family protein n=1 Tax=Desulfonatronos... 280 1e-73 UniRef50_B3CTI8 Putative integrase n=7 Tax=Orientia tsutsugamush... 279 1e-73 UniRef50_Q3SF40 Putative phage integrase n=5 Tax=Proteobacteria ... 279 1e-73 UniRef50_Q2T016 Site-specific recombinase, phage integrase famil... 279 1e-73 UniRef50_A4SSF4 Phage integrase n=3 Tax=Proteobacteria RepID=A4S... 279 2e-73 UniRef50_Q5P090 Integrase n=1 Tax=Aromatoleum aromaticum EbN1 Re... 278 2e-73 UniRef50_B2UB26 Integrase family protein n=2 Tax=Ralstonia RepID... 278 3e-73 UniRef50_Q3JXH9 Integrase or site-specific recombinase n=24 Tax=... 277 7e-73 UniRef50_P37317 Integrase n=42 Tax=root RepID=VINT_BPSFV 276 1e-72 UniRef50_C3MAV8 DNA integration/recombination/invertion protein ... 276 1e-72 UniRef50_A4TWM2 Phage integrase n=1 Tax=Magnetospirillum gryphis... 275 2e-72 UniRef50_Q129B4 Phage integrase n=1 Tax=Polaromonas sp. JS666 Re... 275 2e-72 UniRef50_A3UV17 Phage integrase n=1 Tax=Vibrio splendidus 12B01 ... 275 3e-72 UniRef50_D2YQV3 Phage integrase family protein n=2 Tax=Vibrio Re... 274 3e-72 UniRef50_Q5P855 Phage integrase n=5 Tax=Proteobacteria RepID=Q5P... 274 5e-72 UniRef50_B9ZR50 Integrase family protein n=2 Tax=Gammaproteobact... 274 6e-72 UniRef50_B2I529 Integrase family protein n=3 Tax=Proteobacteria ... 274 6e-72 UniRef50_D2LD60 Integrase family protein n=1 Tax=Rhodomicrobium ... 274 6e-72 UniRef50_A7MWW9 Putative uncharacterized protein n=1 Tax=Vibrio ... 273 8e-72 UniRef50_B7RVJ7 Site-specific recombinase, phage integrase famil... 273 8e-72 UniRef50_A1BGX1 Phage integrase family protein n=25 Tax=root Rep... 273 9e-72 UniRef50_C6E138 Integrase family protein n=1 Tax=Geobacter sp. M... 273 1e-71 UniRef50_Q0AH02 Phage integrase family protein n=2 Tax=Nitrosomo... 273 1e-71 UniRef50_A1WTV4 Phage integrase family protein n=1 Tax=Halorhodo... 273 1e-71 UniRef50_C6XR20 Integrase family protein n=1 Tax=Hirschia baltic... 272 2e-71 UniRef50_Q93UI5 Integrase-like gene 1 n=1 Tax=Escherichia coli R... 272 2e-71 UniRef50_B9MGW9 Integrase family protein n=1 Tax=Diaphorobacter ... 272 2e-71 UniRef50_A9IRV8 Int3 protein n=1 Tax=Bordetella petrii DSM 12804... 272 2e-71 UniRef50_B0UGI0 Integrase family protein n=1 Tax=Methylobacteriu... 272 2e-71 UniRef50_A7IMK8 Integrase family protein n=39 Tax=Bacteria RepID... 272 3e-71 UniRef50_A5G0X2 Phage integrase family protein n=1 Tax=Acidiphil... 271 4e-71 UniRef50_C0VMW7 Phage integrase n=2 Tax=Acinetobacter RepID=C0VM... 271 4e-71 UniRef50_P32053 Prophage CP4-57 integrase n=104 Tax=Gammaproteob... 270 7e-71 UniRef50_A4VPC8 Site-specific recombinase, phage integrase famil... 270 8e-71 UniRef50_B4X5T7 Site-specific recombinase, phage integrase famil... 269 1e-70 UniRef50_C5V4I9 Integrase family protein n=1 Tax=Gallionella fer... 269 1e-70 UniRef50_C7JF17 Phage DNA recombinase n=8 Tax=Acetobacter pasteu... 269 2e-70 UniRef50_D1B120 Integrase family protein n=1 Tax=Sulfurospirillu... 268 3e-70 UniRef50_C6QCE7 Integrase family protein n=1 Tax=Hyphomicrobium ... 268 3e-70 UniRef50_A5EXV7 Integrase A2 n=6 Tax=Cardiobacteriaceae RepID=A5... 268 3e-70 UniRef50_A6X585 Phage integrase family protein n=1 Tax=Ochrobact... 268 4e-70 UniRef50_B9KV34 Phage integrase n=4 Tax=Rhodobacter RepID=B9KV34... 267 5e-70 UniRef50_Q5ZWK0 Phage related integrase n=15 Tax=Proteobacteria ... 267 6e-70 UniRef50_Q0EWR9 Integrative genetic element Gsu32, integrase n=1... 267 8e-70 UniRef50_Q6AR70 Probable prophage integrase n=1 Tax=Desulfotalea... 266 1e-69 UniRef50_Q5P707 Phage-related integrase n=2 Tax=Proteobacteria R... 266 1e-69 UniRef50_Q3J1E6 Possible phage-related integrase n=2 Tax=Rhodoba... 266 1e-69 UniRef50_A4VJM8 Integrase n=2 Tax=Gammaproteobacteria RepID=A4VJ... 266 1e-69 UniRef50_A9IGA6 Phage-related integrase n=50 Tax=root RepID=A9IG... 266 1e-69 UniRef50_A5FXQ0 Phage integrase family protein n=1 Tax=Acidiphil... 265 3e-69 UniRef50_B6JJF3 Phage integrase family protein n=2 Tax=Bradyrhiz... 265 3e-69 UniRef50_B7UT12 Predicted P4-family integrase n=26 Tax=Enterobac... 264 4e-69 UniRef50_A4U0F6 Phage integrase n=1 Tax=Magnetospirillum gryphis... 264 5e-69 UniRef50_A6X006 Phage integrase family protein n=2 Tax=Alphaprot... 264 5e-69 UniRef50_A4Y9I4 Phage integrase family protein n=3 Tax=Shewanell... 264 5e-69 UniRef50_A3V8A4 Possible phage-related integrase n=2 Tax=Rhodoba... 264 5e-69 UniRef50_A6QCY9 Site-specific recombinase, phage integrase famil... 264 6e-69 UniRef50_A0KW55 Phage integrase family protein n=30 Tax=Gammapro... 264 6e-69 UniRef50_B5K290 Phage integrase n=2 Tax=Octadecabacter antarctic... 264 7e-69 UniRef50_B7MX56 Integrase from prophage n=96 Tax=Gammaproteobact... 264 7e-69 UniRef50_B3R9I1 Prophage INTEGRASE PROTEIN n=1 Tax=Cupriavidus t... 263 8e-69 UniRef50_C4GIW0 Putative uncharacterized protein n=1 Tax=Kingell... 263 9e-69 UniRef50_B8L9U1 Phage integrase family protein n=1 Tax=Stenotrop... 263 1e-68 UniRef50_C4SWJ3 Phage integrase n=7 Tax=Gammaproteobacteria RepI... 263 1e-68 UniRef50_B5EC35 Integrase family protein n=1 Tax=Geobacter bemid... 262 1e-68 UniRef50_A4SIA1 Phage integrase family protein n=2 Tax=Gammaprot... 262 2e-68 UniRef50_Q1K3L6 Phage integrase n=1 Tax=Desulfuromonas acetoxida... 262 2e-68 UniRef50_A5EBE3 Putative phage related integrase n=1 Tax=Bradyrh... 262 3e-68 UniRef50_A1AE42 Integrase-like protein n=11 Tax=root RepID=A1AE4... 262 3e-68 UniRef50_Q39TC0 Phage integrase n=1 Tax=Geobacter metallireducen... 261 3e-68 UniRef50_D0W4G5 Site-specific recombinase, phage integrase famil... 261 3e-68 UniRef50_B6WV41 Putative uncharacterized protein n=1 Tax=Desulfo... 261 3e-68 UniRef50_B5J7N6 Site-specific recombinase, phage integrase famil... 261 3e-68 UniRef50_A1AQ50 Phage integrase family protein n=1 Tax=Pelobacte... 261 4e-68 UniRef50_B3A9A3 Prophage integrase n=2 Tax=Escherichia coli O157... 261 4e-68 UniRef50_B1JDS4 Integrase family protein n=3 Tax=Pseudomonadacea... 261 4e-68 UniRef50_B2TTV9 Site-specific recombinase, phage integrase famil... 261 4e-68 UniRef50_Q2VZX9 Integrase n=1 Tax=Magnetospirillum magneticum AM... 260 6e-68 UniRef50_Q0I4F8 Integrase n=1 Tax=Haemophilus somnus 129PT RepID... 260 7e-68 UniRef50_Q0BEM8 Phage integrase family protein n=4 Tax=Burkholde... 259 1e-67 UniRef50_B0C8U1 Phage integrase family protein n=1 Tax=Acaryochl... 259 2e-67 UniRef50_Q7MPT5 Site-specific recombinase, phage integrase famil... 259 2e-67 UniRef50_Q3A6E0 Site-specific recombinase/integrase n=3 Tax=Pelo... 259 2e-67 UniRef50_A7ICY0 Integrase family protein n=14 Tax=Alphaproteobac... 258 3e-67 UniRef50_B0RRY6 Complete genome, strain B100 n=3 Tax=Proteobacte... 258 3e-67 UniRef50_B9R4Q2 Site-specific recombinase, phage integrase famil... 258 4e-67 UniRef50_C6RKK3 Phage integrase n=3 Tax=Acinetobacter RepID=C6RK... 257 5e-67 UniRef50_A7ZQ61 Phage integrase family protein n=32 Tax=Gammapro... 257 7e-67 UniRef50_A6F6W3 Putative uncharacterized protein n=1 Tax=Moritel... 256 1e-66 UniRef50_A7JSX8 Bacteriophage integrase n=3 Tax=Pasteurellaceae ... 256 1e-66 UniRef50_Q74H29 Integrative genetic element Gsu32, integrase n=1... 256 1e-66 UniRef50_B1Y4T5 Integrase family protein n=3 Tax=Betaproteobacte... 256 1e-66 UniRef50_B0KFC6 Integrase family protein n=5 Tax=Pseudomonas put... 256 1e-66 UniRef50_D0CWC5 Phage integrase family protein n=1 Tax=Silicibac... 255 2e-66 UniRef50_A1U0R6 Phage integrase family protein n=2 Tax=Gammaprot... 255 2e-66 UniRef50_C5RZC7 Phage integrase family protein n=1 Tax=Actinobac... 255 2e-66 UniRef50_Q5E028 Phage family integrase n=2 Tax=Vibrionaceae RepI... 255 2e-66 UniRef50_B9R123 Site-specific recombinase, phage integrase famil... 255 3e-66 UniRef50_Q2T3P2 Integrase n=31 Tax=pseudomallei group RepID=Q2T3... 255 3e-66 UniRef50_A5CFJ0 Phage-related integrase n=19 Tax=Orientia tsutsu... 255 3e-66 UniRef50_A7HPZ7 Integrase family protein n=1 Tax=Parvibaculum la... 254 4e-66 UniRef50_B3AX37 Site-specific recombinase, phage integrase famil... 254 5e-66 UniRef50_Q7MKK6 Integrase n=6 Tax=Proteobacteria RepID=Q7MKK6_VIBVY 254 7e-66 UniRef50_A1AQX4 Phage integrase family protein n=1 Tax=Pelobacte... 254 8e-66 UniRef50_A6X736 Phage integrase family protein n=1 Tax=Ochrobact... 253 9e-66 UniRef50_Q92LG2 Phage-related integrase n=1 Tax=Sinorhizobium me... 253 9e-66 UniRef50_B7S183 Site-specific recombinase, phage integrase famil... 253 1e-65 UniRef50_B9Z434 Integrase family protein n=2 Tax=Neisseriaceae R... 253 1e-65 UniRef50_B6R5P1 Phage integrase n=1 Tax=Pseudovibrio sp. JE062 R... 253 1e-65 UniRef50_Q1NSR7 Phage integrase n=1 Tax=delta proteobacterium ML... 253 1e-65 UniRef50_B9JF62 Tyrosine site-specific integrase/recombinase pro... 252 1e-65 UniRef50_A6Q4N1 Site-specific recombinase, phage integrase famil... 252 1e-65 UniRef50_A0EVM1 Integrase n=77 Tax=cellular organisms RepID=A0EV... 252 1e-65 UniRef50_A4F5J8 Putative uncharacterized protein n=1 Tax=uncultu... 252 2e-65 UniRef50_D2MI75 Phage integrase family protein n=1 Tax=Candidatu... 252 2e-65 UniRef50_B5QDA8 Phage integrase family protein n=1 Tax=Salmonell... 252 3e-65 UniRef50_B7N6K6 Prophage CP4-57 integrase n=8 Tax=Enterobacteria... 252 3e-65 UniRef50_A1W6C2 Phage integrase family protein n=8 Tax=Burkholde... 251 3e-65 UniRef50_Q2NBN0 Site-specific recombinase, phage integrase famil... 251 4e-65 UniRef50_Q7WFY2 Phage-related integrase n=1 Tax=Bordetella bronc... 251 4e-65 UniRef50_UPI0001AF6377 prophage PSPPH01, site-specific recombina... 251 4e-65 UniRef50_A6F4S5 Putative integrase n=1 Tax=Marinobacter algicola... 251 4e-65 UniRef50_Q48NQ4 Prophage PSPPH01, site-specific recombinase, pha... 250 6e-65 UniRef50_A6VC70 Integrase n=11 Tax=Proteobacteria RepID=A6VC70_P... 250 7e-65 UniRef50_C6MJ55 Integrase family protein n=2 Tax=Betaproteobacte... 250 9e-65 UniRef50_B7XGJ8 Integrase n=9 Tax=root RepID=B7XGJ8_PSEPU 250 9e-65 UniRef50_A3D8Y2 Phage integrase family protein n=4 Tax=Shewanell... 250 1e-64 UniRef50_A9VZC1 Integrase family protein n=3 Tax=Alphaproteobact... 250 1e-64 UniRef50_C7JAN4 Phage integrase n=17 Tax=Acetobacteraceae RepID=... 249 1e-64 UniRef50_A5G635 Phage integrase family protein n=1 Tax=Geobacter... 249 1e-64 UniRef50_A1WLK0 Phage integrase family protein n=4 Tax=Burkholde... 249 1e-64 UniRef50_A4Y8Q0 Phage integrase family protein n=2 Tax=Shewanell... 249 1e-64 UniRef50_B3E293 Integrase family protein n=1 Tax=Geobacter lovle... 249 2e-64 UniRef50_A3VQY7 Phage integrase n=1 Tax=Parvularcula bermudensis... 249 2e-64 UniRef50_Q2G674 Phage integrase n=1 Tax=Novosphingobium aromatic... 249 3e-64 UniRef50_Q2GBL9 Phage integrase n=3 Tax=cellular organisms RepID... 248 3e-64 UniRef50_B6QXT6 Phage integrase n=2 Tax=Pseudovibrio sp. JE062 R... 248 3e-64 UniRef50_B8GNQ7 Phage integrase family protein n=6 Tax=Proteobac... 248 4e-64 UniRef50_C7JFF4 Phage integrase n=8 Tax=Acetobacter pasteurianus... 248 4e-64 UniRef50_B0TQV5 Integrase family protein n=1 Tax=Shewanella hali... 247 5e-64 UniRef50_B5J7B6 Site-specific recombinase, phage integrase famil... 247 6e-64 UniRef50_A1TYD6 Phage integrase family protein n=1 Tax=Marinobac... 246 1e-63 UniRef50_A4SXW8 Phage integrase family protein n=1 Tax=Polynucle... 245 2e-63 UniRef50_B4WEQ1 Site-specific recombinase, phage integrase famil... 245 2e-63 UniRef50_A1TXN0 Phage integrase family protein n=1 Tax=Marinobac... 245 2e-63 UniRef50_A5L0D7 Site-specific recombinase, phage integrase famil... 245 2e-63 UniRef50_B1Y106 Integrase family protein n=1 Tax=Leptothrix chol... 245 3e-63 UniRef50_D2LKM4 Integrase family protein n=1 Tax=Rhodomicrobium ... 245 4e-63 UniRef50_A3WKP7 Site-specific recombinase, phage integrase famil... 244 4e-63 UniRef50_A5WEX8 Phage integrase family protein n=2 Tax=Psychroba... 244 5e-63 UniRef50_A3UTJ0 Site-specific recombinase XerD-like n=1 Tax=Vibr... 244 7e-63 UniRef50_C3XC22 Integrase n=3 Tax=Oxalobacter formigenes RepID=C... 244 7e-63 UniRef50_Q6LTT6 Hypothetical integrase n=1 Tax=Photobacterium pr... 244 7e-63 UniRef50_C6I0A6 Phage integrase family protein n=1 Tax=Leptospir... 244 8e-63 UniRef50_D0SJJ0 Phage integrase n=6 Tax=Acinetobacter RepID=D0SJ... 243 9e-63 UniRef50_B3E8B2 Integrase family protein n=1 Tax=Geobacter lovle... 243 1e-62 UniRef50_D2LIX3 Integrase family protein n=1 Tax=Rhodomicrobium ... 243 1e-62 UniRef50_C8NCE3 Phage integrase family site-specific recombinase... 242 2e-62 UniRef50_Q2N8A1 Symbiosis island integrase n=12 Tax=Bacteria Rep... 242 2e-62 UniRef50_Q0TL05 Phage integrase n=6 Tax=Escherichia coli RepID=Q... 242 2e-62 UniRef50_Q2W9L7 Integrase n=1 Tax=Magnetospirillum magneticum AM... 242 2e-62 UniRef50_B7NKE6 Integrase of prophage n=42 Tax=Enterobacteriacea... 242 2e-62 UniRef50_Q083S5 Phage integrase family protein n=3 Tax=Shewanell... 242 2e-62 UniRef50_Q2NBN1 Site-specific recombinase, phage integrase famil... 242 2e-62 UniRef50_A3WST9 Probable integrase protein n=2 Tax=Bradyrhizobia... 242 2e-62 UniRef50_B2HWC8 Integrase n=6 Tax=Acinetobacter RepID=B2HWC8_ACIBC 242 3e-62 UniRef50_Q1VBR2 Site-specific recombinase XerD-like protein n=1 ... 241 4e-62 UniRef50_Q1Q875 Phage integrase n=3 Tax=Gammaproteobacteria RepI... 241 4e-62 UniRef50_B8F737 Phage integrase family site specific recombinase... 241 5e-62 UniRef50_C7I5J5 Integrase family protein n=2 Tax=Thiomonas inter... 240 7e-62 UniRef50_A6FVR7 Phage integrase n=3 Tax=Roseobacter sp. AzwK-3b ... 240 7e-62 UniRef50_Q21D10 Phage integrase n=3 Tax=Alphaproteobacteria RepI... 240 8e-62 UniRef50_A5F3U5 Site-specific recombinase, phage integrase famil... 240 1e-61 UniRef50_B5JZM6 Site-specfic recombinase, phage integrase family... 240 1e-61 UniRef50_Q8EJS4 Site-specific recombinase, phage integrase famil... 240 1e-61 UniRef50_Q2SP99 Integrase n=2 Tax=Gammaproteobacteria RepID=Q2SP... 240 1e-61 UniRef50_C4LB72 Integrase family protein n=9 Tax=Gammaproteobact... 240 1e-61 Sequences not found previously or not previously below threshold: UniRef50_C0N6F7 Site-specific recombinase, phage integrase famil... 271 4e-71 UniRef50_C8R2J0 Integrase family protein n=1 Tax=Desulfurivibrio... 263 8e-69 UniRef50_C3K287 Putative phage integrase n=1 Tax=Pseudomonas flu... 255 3e-66 UniRef50_A1VQL7 Phage integrase family protein n=2 Tax=Burkholde... 251 3e-65 UniRef50_D0KY10 Integrase family protein n=1 Tax=Halothiobacillu... 250 1e-64 UniRef50_C8KXV2 Prophage CP4-57-like integrase n=1 Tax=Actinobac... 247 6e-64 UniRef50_C7HXY0 Integrase family protein n=1 Tax=Thiomonas inter... 247 1e-63 UniRef50_A1WW57 Phage integrase family protein n=4 Tax=Proteobac... 245 2e-63 UniRef50_B8F555 CP4-57 prophage, integrase n=1 Tax=Haemophilus p... 245 3e-63 UniRef50_Q3JN19 Prophage CP4-like integrase n=62 Tax=Proteobacte... 245 4e-63 UniRef50_B3GXJ8 Prophage CP4-57 integrase n=4 Tax=Pasteurellacea... 244 5e-63 UniRef50_C6RSU9 Phage integrase family protein n=3 Tax=Acinetoba... 244 8e-63 UniRef50_UPI0000E0FEDC DNA integration/recombination/inversion p... 243 1e-62 UniRef50_B6BKY5 DNA integration/recombination/inversion protein ... 243 1e-62 UniRef50_C1TL52 Integrase n=1 Tax=Dethiosulfovibrio peptidovoran... 243 1e-62 UniRef50_Q1QA94 Phage integrase n=1 Tax=Psychrobacter cryohalole... 240 8e-62 UniRef50_B7I6Z3 Site-specific recombinase, phage integrase famil... 240 8e-62 UniRef50_A5V414 Phage integrase family protein n=1 Tax=Sphingomo... 240 9e-62 UniRef50_Q4K6S7 Site-specific recombinase, phage integrase famil... 239 2e-61 UniRef50_A1ANR7 Phage integrase family protein n=1 Tax=Pelobacte... 239 2e-61 UniRef50_D0SZI9 Integrase n=14 Tax=cellular organisms RepID=D0SZ... 239 2e-61 UniRef50_Q4QNN7 Prophage CP4-57-like integrase n=4 Tax=Haemophil... 239 3e-61 UniRef50_A5EQ25 P4-like integrase n=1 Tax=Bradyrhizobium sp. BTA... 238 3e-61 >UniRef50_P71298 Putative prophage CP4-6 integrase n=7 Tax=Proteobacteria RepID=INTF_ECOLI Length = 466 Score = 463 bits (1192), Expect = e-129, Method: Composition-based stats. Identities = 466/466 (100%), Positives = 466/466 (100%) Query: 1 MFIPSIYLHQQLHYCKTAILNWSRKMALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTL 60 MFIPSIYLHQQLHYCKTAILNWSRKMALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTL Sbjct: 1 MFIPSIYLHQQLHYCKTAILNWSRKMALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTL 60 Query: 61 ACRATSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAV 120 ACRATSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAV Sbjct: 61 ACRATSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAV 120 Query: 121 KIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGES 180 KIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGES Sbjct: 121 KIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGES 180 Query: 181 KKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNY 240 KKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNY Sbjct: 181 KKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNY 240 Query: 241 QKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVL 300 QKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVL Sbjct: 241 QKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVL 300 Query: 301 LLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNK 360 LLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNK Sbjct: 301 LLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNK 360 Query: 361 EGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIM 420 EGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIM Sbjct: 361 EGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIM 420 Query: 421 GHKPSALAEKHYRRRPLDLLRKWHEKIETWILNEAGITIKNNVDMR 466 GHKPSALAEKHYRRRPLDLLRKWHEKIETWILNEAGITIKNNVDMR Sbjct: 421 GHKPSALAEKHYRRRPLDLLRKWHEKIETWILNEAGITIKNNVDMR 466 >UniRef50_A4LPJ2 Phage integrase n=2 Tax=Burkholderia pseudomallei RepID=A4LPJ2_BURPS Length = 437 Score = 334 bits (858), Expect = 3e-90, Method: Composition-based stats. Identities = 198/433 (45%), Positives = 267/433 (61%), Gaps = 14/433 (3%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIG 87 ++R FT R+R F P KQ F+WDA + L RAT+G+ +F+FQ AG T+R TIG Sbjct: 1 MARINFTAGRVRDFRCPPDSKQVFMWDAGMPGLGLRATTGSVSFIFQGRIAGNTIRTTIG 60 Query: 88 NINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYL 147 ++ W ID AR +AR L+ LID G DPR+ KA + + + ES++ VT AW+ ++ Sbjct: 61 DVRAWDIDGARQKARELKKLIDEGKDPRVEKAAVLKAVQEQRVESQRRHVTLEDAWKAHI 120 Query: 148 QELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPD 207 + R T ++ KRG AG L LL++PLS LT D Sbjct: 121 EANRARWGKHTLSD-----REKVSRRGGDAPKAGKRGGALRVAGALVGLLDVPLSGLTAD 175 Query: 208 YIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSAS 267 IA WL+ E RPT + A+RLLRA + W +K+ G++P + VR+ VP + Sbjct: 176 TIADWLARETATRPTQASLAFRLLRACLNWCAEHEKWSGLVPERVCSTRKVRQHVPKPRA 235 Query: 268 KADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI 327 K+D CLQ+EQL WFS VR + N S YLQ+LLLTGAR E+ ++W+DVDF+W+++ + Sbjct: 236 KSD-CLQREQLAPWFSGVRGIGNAHYSTYLQMLLLTGARPGELLEVKWADVDFRWNTLNL 294 Query: 328 KDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRS-NSKSGKIIEPRSAHNRALV 386 +DKIEGER IPLTPYVS LL L + VF S SK+G++ P H+ L Sbjct: 295 RDKIEGERTIPLTPYVSSLLAALPRI-------NDLVFASTRSKTGRMKAPNVPHHAVLE 347 Query: 387 LAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEK 446 A + ++LHGLRRSF TL EW+E P G+VAQIMGHKPSA AEKHY++RP+DLLR WH K Sbjct: 348 KAHIEGLTLHGLRRSFATLTEWIECPVGVVAQIMGHKPSATAEKHYKQRPIDLLRMWHTK 407 Query: 447 IETWILNEAGITI 459 IETW+LNEAG++ Sbjct: 408 IETWMLNEAGVSP 420 >UniRef50_B7D090 Phage integrase family protein n=1 Tax=Burkholderia pseudomallei 576 RepID=B7D090_BURPS Length = 449 Score = 330 bits (847), Expect = 6e-89, Method: Composition-based stats. Identities = 213/439 (48%), Positives = 284/439 (64%), Gaps = 18/439 (4%) Query: 29 SRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIGN 88 +R FT R+R F P KQ F+WD+ L RAT+G+ ++VFQ AG T+R TIG+ Sbjct: 24 ARINFTAGRVRDFRCPPDAKQIFMWDSGAPGLGLRATAGSVSYVFQGRIAGNTVRTTIGD 83 Query: 89 INDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQ 148 W ID AR +AR LQ LID G DPR+ KA IA ++ + ESR+ + T AW+ Y+ Sbjct: 84 ARTWDIDGARQKARELQKLIDEGKDPRVEKAAAIAVTQARRVESRRHQATLDAAWKSYID 143 Query: 149 ELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQG-PTSAGPLASLLNLPLSELTPD 207 R+ +S ++ADH +S RGGE +KRG+ P G L+SLL++PL +LT D Sbjct: 144 VNRSR--------WSDHHVADHEKVSHRGGEMRKRGRKQPRVRGALSSLLDVPLPDLTAD 195 Query: 208 YIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSAS 267 IA WL E ++RPT + A+RLLRA + W Q ++ G++P + + VR+ VP + Sbjct: 196 VIAEWLKRETESRPTQASLAFRLLRACLNWCAEQHEWSGLVPEHVCRTRKVRQNVPKVRA 255 Query: 268 KADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI 327 K+D CLQ+EQL WF VR + NP+ SA+LQ LLLTGARREE+ L+W+D+DF+W++M + Sbjct: 256 KSD-CLQREQLAPWFDGVRQIANPVVSAFLQALLLTGARREEMNELKWTDLDFRWNTMML 314 Query: 328 KDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRS-NSKSGKIIEPRSAHNRALV 386 +DK+EG+R IPLTPY+ LL L + WVF S S SG++ P H L Sbjct: 315 RDKVEGDRTIPLTPYMGLLLGALPRR-------NEWVFSSVKSGSGRLQAPDDRHRIVLR 367 Query: 387 LAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEK 446 A L ++LHGLRRSF TL EW+E P G+VAQIMGHKPSA AEKHY++RP+DLLR WH K Sbjct: 368 AAHLEGLTLHGLRRSFSTLTEWIECPAGVVAQIMGHKPSATAEKHYKQRPIDLLRMWHTK 427 Query: 447 IETWILNEAGITIKNNVDM 465 IE WILNEAGIT+ M Sbjct: 428 IEAWILNEAGITLPATQQM 446 >UniRef50_Q6ARX0 Related to integrase n=5 Tax=Proteobacteria RepID=Q6ARX0_DESPS Length = 465 Score = 321 bits (822), Expect = 5e-86, Method: Composition-based stats. Identities = 196/447 (43%), Positives = 257/447 (57%), Gaps = 28/447 (6%) Query: 25 KMALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVY-----AG 79 + A+ R T R+R LP KKQ FLWD D L R T AK F+FQS G Sbjct: 24 EPAMPR--LTLNRIRNAKLPPNKKQIFLWDEDAKGLGVRITGSAKVFIFQSRMLMPDKNG 81 Query: 80 KTL----RMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKT 135 R+ IG + ++DAR ARR + GIDPR A+ + + E ++ Sbjct: 82 ILKPSTFRIKIGGCDSVLLEDARNVARRYAAQVAEGIDPRQARQRTAENEATERQERKRQ 141 Query: 136 KVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLAS 195 VT AW Y++E R S K Y +DH + S GG+ KKRG+G T AGPLAS Sbjct: 142 DVTIGKAWPTYMEERRPNWSTK--------YYSDHERIISPGGKQKKRGKGLTVAGPLAS 193 Query: 196 LLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQD 255 + NLPLS +T D I WL+ E+ RPT T A+ +LR F+ W K+Y G+ P + Sbjct: 194 IANLPLSSVTADSIKKWLADEQPKRPTETRRAFEMLRTFLNWCEADKRYHGLAPPNACSA 253 Query: 256 YNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRW 315 ++K + DD LQ+EQL WF++VR N + SAY+Q+L L GARREE+ SL+W Sbjct: 254 -KIKKDNLTKKNSRDDALQREQLSVWFASVRRYENKVLSAYVQMLFLIGARREELLSLKW 312 Query: 316 SDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRS-NSKSGKI 374 SDVDF+W + I K R +PLTPYV+ LL+ L + WVF S K G++ Sbjct: 313 SDVDFRWKKVHILGKGAVPRDLPLTPYVAALLSKLPRR-------NEWVFSSTRGKEGRL 365 Query: 375 IEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRR 434 P A + + AE+ I+LHGLRRSF TL+EW+E P GIV QI GH+PSA AEKHY++ Sbjct: 366 QSPTKAFQKMMSRAEIDDITLHGLRRSFSTLSEWLETPVGIVYQIQGHEPSATAEKHYKK 425 Query: 435 RPLDLLRKWHEKIETWILNEAGITIKN 461 RP+DLLRKWH KIE WIL EAG+ + Sbjct: 426 RPVDLLRKWHIKIEAWILEEAGVEVPG 452 >UniRef50_C6MHB2 Integrase family protein n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MHB2_9PROT Length = 434 Score = 318 bits (815), Expect = 3e-85, Method: Composition-based stats. Identities = 186/438 (42%), Positives = 256/438 (58%), Gaps = 23/438 (5%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTI 86 + + FT +R+ F G KQ+ WD + L R T SGAK+++FQ+ +T+R+TI Sbjct: 1 MKWKNFTTDRVAGFKCKPGAKQSIYWDGKIPGLGLRVTASGAKSYIFQTEMHNRTIRLTI 60 Query: 87 GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAES----LQAESRKTKVTFSVA 142 G+ W I DA+ EA RL+ + D IDPR KA E+ +A+ + VT A Sbjct: 61 GDSRAWSISDAQDEATRLKVMTDQSIDPRQVKADAAVAKEAAEVARKAQGNRETVTVGRA 120 Query: 143 WEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLS 202 W++Y+ ++ + ++ DH+ GGE + R + T G LA L ++ L Sbjct: 121 WDEYVNVMK--------STWGALHLHDHVRAMQSGGEQRTRSKKLTEPGTLAPLADMRLI 172 Query: 203 ELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMV 262 +LT + I AW E RP +A LL F+ W Y II + AQ V+K + Sbjct: 173 DLTTERITAWAKVEGTKRPARARNARTLLSTFLNWCITHPTYSAIIASNPAQSKEVKKYL 232 Query: 263 PVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKW 322 +SK D LQ+EQL +WF+AV+ + NP+ SAYLQ LLLTGAR E+ +L W D+DF+W Sbjct: 233 GKPSSKND-ALQREQLSAWFNAVKQIQNPVISAYLQTLLLTGARPNELITLCWEDIDFQW 291 Query: 323 SSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSN-SKSGKIIEPRSAH 381 +S+ IKDK+EG R+IPLTPYV LL+ + + W F S S SG ++EPR AH Sbjct: 292 NSITIKDKVEGLRVIPLTPYVGYLLSAMPRR-------NQWAFSSPTSASGHLVEPRIAH 344 Query: 382 NRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLR 441 ++A +A L ++LHGLRRSF +L EW+E P GI AQI GHKP + EKHY RRPLDLLR Sbjct: 345 DKACKIAGL-DVTLHGLRRSFASLCEWIETPAGIAAQIQGHKPQGVREKHYIRRPLDLLR 403 Query: 442 KWHEKIETWILNEAGITI 459 WH KIE WIL +AGI Sbjct: 404 VWHVKIEEWILEQAGIKF 421 >UniRef50_Q2SV18 Phage integrase n=20 Tax=Betaproteobacteria RepID=Q2SV18_BURTA Length = 479 Score = 316 bits (810), Expect = 1e-84, Method: Composition-based stats. Identities = 218/465 (46%), Positives = 286/465 (61%), Gaps = 44/465 (9%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTI 86 ++++ FT ER+ + G++QT WD L R T SG K++VF+ GKT+R+TI Sbjct: 1 MTKENFTIERVTGYECTPGRQQTIYWDKKQQGLGLRVTASGVKSYVFEGRLFGKTVRITI 60 Query: 87 GNINDWKIDD----------------ARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQA 130 G+ N W ++ AR EA RL+ L+D GIDPR +A + AE E+ + Sbjct: 61 GSPNAWPLERHATTDAATGKTIERLGARQEAARLKALMDRGIDPREERAEQRAEHEARKL 120 Query: 131 ESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSA 190 ++ + T S AW YL R+ S R+ DH L+ GG KRG+G T Sbjct: 121 DALRQNATVSEAWAAYLDAHRSKWSG--------RHYYDHEKLAQAGGLPWKRGRGTTIP 172 Query: 191 GPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPG 250 GPLA+L+ L L++L + +A WL E + RPT T +YR LRAFI+W + +Y G I Sbjct: 173 GPLATLMPLKLTDLNAERVAMWLEAEAEKRPTNTEQSYRKLRAFIRWCEDKPEYSGSIAP 232 Query: 251 DLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEI 310 + VR VP + +K+D CLQ+EQL WF+AVR ++NP+ SAYLQ LLLTGARREE+ Sbjct: 233 NAYAARAVRAAVPRTKAKSD-CLQREQLLVWFTAVRQIDNPVISAYLQGLLLTGARREEL 291 Query: 311 ASLRWSDVDFKWSSMRIKDK--IEGERIIPLTPYVSELLNVLAQ---------------S 353 A+LRW DVDF+W S+ + DK G R IPLTPY++ LL L Q Sbjct: 292 AALRWKDVDFRWRSLTMNDKIEGTGGRTIPLTPYLASLLTNLKQMNEIPPNRRQLASLTE 351 Query: 354 PNSDVNKEGWVFRSNS-KSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVP 412 + WVF SN + GKI EPR AHN A+ A LPH++LHGLRRSFGTL+EWVEVP Sbjct: 352 KGKSWSPSEWVFTSNRSEDGKIAEPRKAHNSAIEAAGLPHLTLHGLRRSFGTLSEWVEVP 411 Query: 413 TGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWILNEAGI 457 G+VAQI GHKPSALAEKHYRRRPLDLLR WH+KIE+W+L +AG+ Sbjct: 412 VGVVAQIQGHKPSALAEKHYRRRPLDLLRMWHDKIESWMLQQAGL 456 >UniRef50_UPI00003841F3 COG0582: Integrase n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI00003841F3 Length = 394 Score = 314 bits (806), Expect = 4e-84, Method: Composition-based stats. Identities = 77/427 (18%), Positives = 150/427 (35%), Gaps = 56/427 (13%) Query: 32 KFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAGKTLRMTIGNIN 90 + T + + + Q F WDADV R T+ GAK+F+ G+ R+TIG+ Sbjct: 4 RITD-AIAKRVSAGDRPQVFFWDADVKGFGLRVTNRGAKSFILDYRIGGRQRRITIGSYP 62 Query: 91 DWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQEL 150 DW + AR EA L+ +D G DP + + + T W+ Y ++ Sbjct: 63 DWSVAAARTEAGNLKREVDLGNDPMGERH------------ADRAAPTMRDLWDRYKRDH 110 Query: 151 RTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIA 210 +A+++ + + L +L + ++T I Sbjct: 111 LPRKAARSQADETMMW----------------------EKLVLPTLGKHKVGDVTHTDIE 148 Query: 211 AWLSTE--RQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 A + P ++R + + + + K Sbjct: 149 ALHRDITVSRGTPVRANRVIEVVRRAFNLAIRWEWIE---------KNPASGQLRNPEEK 199 Query: 269 ADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIK 328 L E+L +A+ + + P+++ +++L+LTGAR+ E+ W D Sbjct: 200 RQRYLSPEELSRLSAALTAHHEPVSADAIRMLMLTGARKSEVLGATWEMFDLDAGVWTKP 259 Query: 329 ---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRAL 385 K E +P++ LL + + + +VF + + + + Sbjct: 260 SAHTKQRKEHRVPVSANALTLLKRIRE-----TAEGPYVFPGKGGDQPLTDVKRSWAAVC 314 Query: 386 VLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHE 445 A++ +H LR SF +L I+ ++GH ++ Y + LR + Sbjct: 315 KAADITGARIHDLRHSFASLLVSGGASLPIIGAMLGHTQVQTTQR-YAHLYDEPLRAAAD 373 Query: 446 KIETWIL 452 + I Sbjct: 374 HVGKTID 380 >UniRef50_Q82XM2 Phage integrase n=1 Tax=Nitrosomonas europaea RepID=Q82XM2_NITEU Length = 416 Score = 313 bits (803), Expect = 8e-84, Method: Composition-based stats. Identities = 198/436 (45%), Positives = 256/436 (58%), Gaps = 29/436 (6%) Query: 29 SRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIGN 88 ++ + T R+ T P Q FLWD LA RAT+G +AF+FQ +AGK++R+TIG+ Sbjct: 3 TKVRLTPSRIAAHTCPADASQAFLWDTATPGLAVRATAGKRAFIFQGRFAGKSIRITIGD 62 Query: 89 INDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQ 148 W I+ AR AR LQ L+D G DPR+ K KIA + AW DY+ Sbjct: 63 TEVWTIEQARQRARELQGLVDQGRDPRLVKQEKIAADVQARITDEPALP----AWRDYIA 118 Query: 149 ELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQG-----PTSAGPLASLLNLPLSE 203 +S + ADH+ ++ GGE RG+ T G L LL+LPL Sbjct: 119 ARSGK--------WSEAHAADHLKMARDGGEPVTRGRRIGAPAYTEKGILRPLLDLPLKG 170 Query: 204 LTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVP 263 +T + +A WL E RP A LL F+ W Q Y+ + D P Sbjct: 171 ITREKVAQWLDNEATRRPAQARLALSLLGTFLSWCGNQPAYRNQVNSDACAKLKRELPKP 230 Query: 264 VSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWS 323 + DCLQ+EQL SWF+AVRS++NP+ SAYLQ LLLTGARREE+A L W DVDF+W Sbjct: 231 TA---RTDCLQREQLASWFAAVRSIDNPVMSAYLQSLLLTGARREELAGLGWEDVDFQWQ 287 Query: 324 SMRIKDKI-EGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNS-KSGKIIEPRSAH 381 ++ + DK+ R IPLTPYVS+LL L + +VF S KSG++ EPR AH Sbjct: 288 TIHLADKVEHSGRTIPLTPYVSQLLQSLPKI-------NEFVFASKRAKSGRLQEPRKAH 340 Query: 382 NRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLR 441 N+A+ A LP +S+HGLRRSF TL+EWVE P+GI AQIMGHKPSA+AE+HY+RRP+DLLR Sbjct: 341 NQAIEAAGLPPLSIHGLRRSFATLSEWVEAPSGITAQIMGHKPSAIAERHYKRRPVDLLR 400 Query: 442 KWHEKIETWILNEAGI 457 WH KIE WIL+ A I Sbjct: 401 VWHTKIEEWILSNANI 416 >UniRef50_C6BFQ2 Integrase family protein n=4 Tax=Betaproteobacteria RepID=C6BFQ2_RALP1 Length = 412 Score = 311 bits (797), Expect = 4e-83, Method: Composition-based stats. Identities = 94/434 (21%), Positives = 164/434 (37%), Gaps = 44/434 (10%) Query: 32 KFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTIGNIN 90 FT + +PE + +D V+ LA SG + FV K R+ IG Sbjct: 14 NFTKAAIEALPVPEKGWKY-YYDTKVSGLAIGIGASGVRTFVLYRKVNRKPERIKIGRYP 72 Query: 91 DWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQEL 150 D ++ AR +A L I TG +P K ++ AE +TF ++ Y + Sbjct: 73 DLTVEKARTQAMALNGEIATGTNPAELKRIRRAE------------MTFGDLFDQYYKNH 120 Query: 151 RTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIA 210 + K + +++ + G L + LS ++ IA Sbjct: 121 --SLPNKKTSDEDKQKFDQYLSSNRDGVN----------------LASRQLSAISKADIA 162 Query: 211 AWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKAD 270 L+ + + + + P + + + D Sbjct: 163 QLFGKISMEHKITANRVLALVSSIFGKAIEWGIWNQMNPC--------QGIRRNRENSRD 214 Query: 271 DCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDK 330 L ++L +F V + N Y+ V LLTGARR + ++RW DV+ + + RI + Sbjct: 215 RFLHPDELPKFFEHVLAYPNATLRDYMLVSLLTGARRSNVLAMRWEDVNLERAEWRIHET 274 Query: 331 IEG-ERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAE 389 G + +PL P LL + + +VF KSG ++EP+ A L A Sbjct: 275 KNGTPQSVPLVPDAVALLRNRQEM--PECEDSPFVFPGTGKSGHLVEPKKAWKIVLTQAG 332 Query: 390 LPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIET 449 + + LH LRR+ G+ ++ + + HK +A Y R ++ +R E Sbjct: 333 IKDLRLHDLRRTMGSWQAGTGANLSVIGRSLNHKSTATTA-IYARLWMEPVRSSMETAAA 391 Query: 450 WILNEAGITIKNNV 463 +L+ AGI + + Sbjct: 392 AMLSAAGIESRQDA 405 >UniRef50_A1WB37 Phage integrase family protein n=5 Tax=Burkholderiales RepID=A1WB37_ACISJ Length = 452 Score = 307 bits (787), Expect = 5e-82, Method: Composition-based stats. Identities = 192/444 (43%), Positives = 260/444 (58%), Gaps = 26/444 (5%) Query: 30 RQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAGKTLRMTIGN 88 R T + R P GK+Q F+ D++ L R T+ GAK+FV+++ +T+R TIG+ Sbjct: 15 RINLTAGAIDRLACPAGKQQAFMRDSEAPGLRVRVTAAGAKSFVYEAKLDRQTIRRTIGD 74 Query: 89 INDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQ 148 + W I+ AR EARRL ++D G DPR + + A+ + +A + VT W YL+ Sbjct: 75 VKLWSIEQARTEARRLAVVLDNGQDPREIERQQQADKAAAKATAAVQAVTVGEVWALYLE 134 Query: 149 ELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQG---PTSAGPLASLLNLPLSELT 205 R + R+ ADH+ L GGE KRG T AGPL L+ L L +LT Sbjct: 135 ARRPH--------WGARHHADHVKLVQVGGEVSKRGTRGRGVTVAGPLHPLMGLALRDLT 186 Query: 206 PDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPG-DLAQDYNVRKMVPV 264 I AW + E Q RPT A+R L+AF+ W Q +Y +P + A+ R+ + Sbjct: 187 APVIEAWAAREAQTRPTSARLAWRCLKAFLSWCAEQSEYAPAMPSVNPAKTKKAREALGK 246 Query: 265 SASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSS 324 + K D L KEQL +WF+AV+ + NPIA+AYLQVL+LTGAR E+ LRW DV+ KW Sbjct: 247 AGVKQDALL-KEQLPAWFTAVQQIQNPIAAAYLQVLVLTGARPGEVLGLRWEDVNTKWKG 305 Query: 325 MRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSN-----SKSGKIIEPRS 379 + I+DK+EGER+IPLTPYVS LL+ L + WVF S ++ + PR+ Sbjct: 306 LTIRDKVEGERVIPLTPYVSHLLHSLPRR-------SDWVFPSTARGKDTEGQTLSIPRA 358 Query: 380 AHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDL 439 H A +A + ++LHGLRRSF +L EW+E+P G+VAQIMGHKPSA AEKHY RPLDL Sbjct: 359 PHTAACAVAGIEGLTLHGLRRSFKSLTEWLEIPAGVVAQIMGHKPSATAEKHYTVRPLDL 418 Query: 440 LRKWHEKIETWILNEAGITIKNNV 463 LR HE+IE WIL +AGI Sbjct: 419 LRVHHERIEAWILEQAGIVFDAKA 442 >UniRef50_C0GWH6 Integrase family protein n=3 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GWH6_9DELT Length = 394 Score = 306 bits (784), Expect = 1e-81, Method: Composition-based stats. Identities = 75/436 (17%), Positives = 147/436 (33%), Gaps = 57/436 (13%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAK-AFVFQSVYA-GKTLRMT 85 + + T + K + +D+DV S K + + G+ + Sbjct: 1 MPKIHLTPSFVSNPPRVRNKAKVDYFDSDVPGFIMEVRSTGKSTYYQRYRDKFGRLKQAR 60 Query: 86 IGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWED 145 I ++ +++AR +A+++++ G DPR AE + TF D Sbjct: 61 IAPVDSITLEEARQKAKQIRSQTTMGFDPRDE------------AEKNRNTPTFKEFIRD 108 Query: 146 YLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 +I S + L N+ +SE+T Sbjct: 109 -----------------------QYIPYIQVHKRSWDQDSKMLELRVLPLWGNMKMSEIT 145 Query: 206 PDYIAAWLST--ERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVP 263 D + + S +P L++ + + + Sbjct: 146 RDDVQQFQSNFLRAGCKPGTVNRYMALVKYIFNLAEKWDVIE--------KTPARHISRL 197 Query: 264 VSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWS 323 + + L E+ K +++ + + +++L+LTGAR+ E+ +L W ++D K Sbjct: 198 EDNNCKERYLSSEETKRLLGELKNCKSQVVPDIIELLILTGARKSEVVNLPWQELDLKQG 257 Query: 324 SMRIKDKIEG---ERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSA 380 I + + IPL+ +L N +VF + G I + Sbjct: 258 LWTIPPERNKAKTRKTIPLSQGALRILEKRK------HNGSEYVFPNPKTGGPIKHFHNT 311 Query: 381 HNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLL 440 +R A +P + +H LR +F +L V +++GH + ++ Y D L Sbjct: 312 WDRVRKNAGIPDVRIHDLRHNFASLLVNSGRSLYEVQKLLGHSNISTTQR-YAHLTQDTL 370 Query: 441 RKWHEKIETWILNEAG 456 R E + I N G Sbjct: 371 RDATELAWSSIQNGQG 386 >UniRef50_Q1NPW4 Phage integrase n=5 Tax=Deltaproteobacteria RepID=Q1NPW4_9DELT Length = 465 Score = 305 bits (782), Expect = 2e-81, Method: Composition-based stats. Identities = 79/430 (18%), Positives = 140/430 (32%), Gaps = 54/430 (12%) Query: 23 SRKMALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYA-GK 80 +R A+ + K + ++ PEGK + +D +T S G K + + GK Sbjct: 82 TRSNAMPKIKLNAKFVKEAVCPEGKAKIDYYDEALTGFILEVRSTGGKTYHLRYRDGHGK 141 Query: 81 TLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFS 140 + IG +D D A+A A RL++ + G DP + K T Sbjct: 142 LRQHKIGGADDISFDKAQAAATRLRSRVVLGEDPLAERQTKK------------QVPTLE 189 Query: 141 VAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLP 200 + KR + + + G L N Sbjct: 190 EFAAE----KYMPYVKGYKRSWKSDF-------------------GYLKNHLLPLFGNQH 226 Query: 201 LSELTPDYIAAWLSTERQNRPT--VTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNV 258 L ++ + + LLR + K + Sbjct: 227 LDQIKQAEVIELHHGMKARGYALATCNRQVILLRYIFNLARKWKIPGADN------NPTT 280 Query: 259 RKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDV 318 + + + + L +++ +A+ S N + +LLL G R+ E+ + RW D Sbjct: 281 GVALFEANNGRERYLTEDEAARLKAALESSENTQLKYIVSLLLLLGCRKSELLNSRWEDF 340 Query: 319 DFKWSSMRIK-DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEP 377 D S RI K R +PL+ E+L + + +V + + Sbjct: 341 DLARRSWRIPLSKSGKARYVPLSTAALEVLASIPRL-------SPYVVPNPKTLQPFVSV 393 Query: 378 RSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPL 437 + + A A LP + +H LR SF + V+Q++GH ++ Y Sbjct: 394 FRSWDTARKKAGLPDVRMHDLRHSFASFLVNSGRSIYEVSQLLGHSQLKTTQR-YSHLSN 452 Query: 438 DLLRKWHEKI 447 D L + I Sbjct: 453 DTLLAAVDSI 462 >UniRef50_C1SPM2 Site-specific recombinase XerD n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SPM2_9BACT Length = 397 Score = 301 bits (771), Expect = 4e-80, Method: Composition-based stats. Identities = 82/431 (19%), Positives = 155/431 (35%), Gaps = 52/431 (12%) Query: 29 SRQKFTFERLRRFTL-PEGKKQTFLWDADVTTLACRATSG-AKAFVFQSV-YAGKTLRMT 85 +++K T +R +G ++WD ++ A R T K++V + G+ MT Sbjct: 3 TKKKLTDAVVRNAKPATQGSGYYYIWDTELKGFALRVTGRPTKSYVIRYRNEEGRQKVMT 62 Query: 86 IGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWED 145 + ++ D+AR +AR T G D K ++ + FS E Sbjct: 63 LFRASNITADEARRKARTKLTEAQGGTDILKEKQ------------EKRKAMLFSEFAEI 110 Query: 146 YLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 YL+ ++ + Y+ L + N PL +T Sbjct: 111 YLEHHARPNNSAGTVKTNESYLER---------------------LILPAFGNRPLKSIT 149 Query: 206 PDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVS 265 P+ A ++ P + LLR + + Sbjct: 150 PEDTAKLHHKIGKSTPVQANRVHALLRKMFTLAETWRYI-------PQNTNPCVHTQKYK 202 Query: 266 ASKADDCLQKEQLKSWFSAVRSLNNPIASA--YLQVLLLTGARREEIASLRWSDVDFKWS 323 + L ++ K + SA L++L+ TG R+EEI +L+W ++ + + Sbjct: 203 ETPVQRFLTPDETKRLEDVLEKYEEKYYSAVLALRLLMYTGCRKEEILTLKWENIKNELN 262 Query: 324 SMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNR 383 + I GE+ +P++ V ++L + +V ++ ++I + R Sbjct: 263 LLHIPKSKTGEKNVPVSHEVLDMLENAYKV-------NEYVCFGKFENSRLIGLQKIWER 315 Query: 384 ALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKW 443 A L + +H LR SF + A + +++++GHK E +Y D L + Sbjct: 316 LRKEAGLEDVRIHDLRHSFASTAISGGINIEFISKLLGHKRITTTEYYYAHVQNDPLHEA 375 Query: 444 HEKIETWILNE 454 KI T I Sbjct: 376 ANKIATSITTA 386 >UniRef50_A8LM37 Integrase family protein n=3 Tax=Rhodobacterales RepID=A8LM37_DINSH Length = 388 Score = 301 bits (770), Expect = 5e-80, Method: Composition-based stats. Identities = 76/433 (17%), Positives = 137/433 (31%), Gaps = 56/433 (12%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYA--GKTLRM 84 + + K + + + G WD + R +SG+K++V Q G++ R Sbjct: 1 MPKVKLSKKLVESAAA--GDGDEVFWDTALPGFGLRVKSSGSKSYVVQYRNRQTGRSRRK 58 Query: 85 TIGNI-NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAW 143 TIG + AR AR G DP + A++R+ + Sbjct: 59 TIGQHGPLMTLYQAREIARGYLADALRGGDPVME------------AQARRKAKSMRDLA 106 Query: 144 EDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSE 203 +DY+ + + L + + E Sbjct: 107 DDYMTNHALPKKRPRSAAMDRSLLDRVV---------------------LPAFGRQSVDE 145 Query: 204 LTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVP 263 ++ I ++ R P LL + + D V+ + Sbjct: 146 VSHKDIQRLHNSLRDT-PYQANRVLALLSKMFELAIRWGLRG---------DNPVKGVPR 195 Query: 264 VSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWS 323 + K L +L A+ + N A+ +++ LLTGAR E+ + +WSD D Sbjct: 196 FAEEKRYRWLSDNELDRLREALDAHPNQRAANAIRLQLLTGARTGEVLTSQWSDFDLDRG 255 Query: 324 SMRIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSA 380 K + +PL+ LL +A + +VF I + + Sbjct: 256 VWVKPSHHTKQKRTEHLPLSAATVALLRSIAHGR---TDDSPFVFPGRKPGHPIKDLKRF 312 Query: 381 HNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLL 440 A L LH R + + IV +++GH ++ Y D L Sbjct: 313 WTSVTSTAGLKDYRLHDNRHTHASHLVSSGHSLPIVGRLLGHTNPMTTQR-YAHLADDPL 371 Query: 441 RKWHEKIETWILN 453 R+ E + + N Sbjct: 372 RQAAEVMGQKLTN 384 >UniRef50_Q1GLB2 Phage integrase n=12 Tax=Rhodobacterales RepID=Q1GLB2_SILST Length = 411 Score = 300 bits (769), Expect = 6e-80, Method: Composition-based stats. Identities = 74/431 (17%), Positives = 139/431 (32%), Gaps = 57/431 (13%) Query: 32 KFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNIN 90 K T + K FLWD+ + R SGAK + Q G+T R+++G Sbjct: 22 KLTKRTVEALM--PEAKDYFLWDSQIAGFGVRVMPSGAKTYQAQYRKGGRTRRVSVGRHG 79 Query: 91 DWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQEL 150 +D+AR A+ + + G +P + T + E + + Sbjct: 80 KITVDEARKLAKEIMGQVAKGENPAEE------------ISQHRKAPTVAALCERFFEAH 127 Query: 151 RTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIA 210 + + R I + +L + + ++ IA Sbjct: 128 AKERCKPSTQKEYRRAID---------------------LFIVPALGSFKVVDVERRDIA 166 Query: 211 AWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKAD 270 R +P +L + R + K + Sbjct: 167 ELHHKFRD-KPHQANRTLGVLSKMFNLAEIWGLR-------PDGSNPCRHVPKYREVKRE 218 Query: 271 DCLQKEQLKSWFSAV-----RSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSM 325 L + +L+ + P A ++L+LTG R EI +L+W + + M Sbjct: 219 RFLSQSELQRLGQVLTEVEREGSETPHMVAAFRLLILTGCRLGEIQTLKWGYI--TANGM 276 Query: 326 RIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRAL 385 + D G R IPL ++L L + +V + + R Sbjct: 277 ELPDSKTGARRIPLPQPARDVLARLPR-----TPGHPYVIEGKLPGQYATDLQHPWRRIR 331 Query: 386 VLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHE 445 A L + +H LR ++ + A +P +V +++GH + Y D +R+ E Sbjct: 332 DRAGLCGVRIHDLRHTYASNAVSAGMPIQMVGRLLGHTQIQTTMR-YAHLADDPVRQAAE 390 Query: 446 KIETWILNEAG 456 + + + G Sbjct: 391 ENAARLGSMVG 401 >UniRef50_A1AUY6 Phage integrase family protein n=2 Tax=Desulfuromonadales RepID=A1AUY6_PELPD Length = 402 Score = 299 bits (766), Expect = 1e-79, Method: Composition-based stats. Identities = 79/446 (17%), Positives = 158/446 (35%), Gaps = 54/446 (12%) Query: 20 LNWSRKMALSRQKFTFERLRRFTLPEG---KKQTFLWDADVTTLACRAT-SGAKAFVFQS 75 + R + FT + + + ++ D + L R + +G + F + Sbjct: 1 MKPYRSNTSRKFPFTKKAIEALPAHDPASPSREMEYADIECIGLHLRVSKNGRRFFQHRY 60 Query: 76 VYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKT 135 Y G+ + +++G + DAR+ + L+ DP + + Sbjct: 61 RYLGRKMCLSLGEFPAVSVQDARSRVAEHKALLARDKDPAAER------------GKVRA 108 Query: 136 KVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLAS 195 +TF ++ + ++ + Sbjct: 109 DLTFEEF-----------------------STQHYLPHAKAHKQTWDDDKNQIERRLNPI 145 Query: 196 LLNLPLSELTPDYIAAWLSTERQNRPT-VTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQ 254 L L L +TP +A S E++ H L+ + + + + Sbjct: 146 LGKLRLQAITPRDVAMVHSKEKERTTACTANHLLATLKRMLNLAVKWGLLE--------K 197 Query: 255 DYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLR 314 + + + L KE+L + A+ ++ ++ A L++LL TG RREEI SLR Sbjct: 198 NPAGGQEKFKEGPLRERYLSKEELPKFLKALEDQDDLLSVAALRMLLYTGCRREEIMSLR 257 Query: 315 WSDVDFKWSSMRIKDKIEGE-RIIPLTPYVSELLNVLAQSPNSD--VNKEGWVFRSN--S 369 W +V + + G R + L E++ L + + +VF S + Sbjct: 258 WENVRLDEERIFLPKTKNGRSRTVHLNARAKEVIQDLQARKDQEDRTRGSEYVFPSRQGT 317 Query: 370 KSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAE 429 K G I + R +A + A + + +H LR +F ++A V +++GH+ A+ + Sbjct: 318 KKGYIYDLRKPFEKACLNAGIDNFRIHDLRHTFASMAVSSGADLYAVQRLLGHQDIAMTQ 377 Query: 430 KHYRRRPLDLLRKWHEKIETWILNEA 455 + Y D L+K E + A Sbjct: 378 R-YAHLNADDLKKATEGVSEMFDRAA 402 >UniRef50_Q93SE7 Integrase n=181 Tax=root RepID=Q93SE7_ECOLX Length = 394 Score = 298 bits (763), Expect = 4e-79, Method: Composition-based stats. Identities = 74/432 (17%), Positives = 139/432 (32%), Gaps = 49/432 (11%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNI 89 T +++ K L D + T+G+K + + +AGK ++IG Sbjct: 1 MALTDIKVKTAK--PKDKPYKLADGG--GMYLLINTNGSKYWRMKYRFAGKEKMLSIGVY 56 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 D + DAR + + L+ G DP AK + A+ K TF ++ Q Sbjct: 57 PDVTLADAREKRSEARKLLAAGGDPGEAKKEEKI------AQQMSLKNTFEAIAREWHQS 110 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 S + + + D + P++E+ P + Sbjct: 111 KADRWSLRYRDEIIDTFEKD----------------------IFPYIGKRPIAEIKPMEL 148 Query: 210 AAWLSTERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 L + + +++ + + A D P Sbjct: 149 LEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRAD----YNPAPDLASALATPKKV-- 202 Query: 269 ADDCLQKEQLKSWFSAVRSL-NNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI 327 L +L + + + + I Q+++LTG R +E+ RW D+DF+ I Sbjct: 203 HFPFLTANELPHFLNDLAGYTGSIITKTATQIIMLTGVRTQELRFARWEDIDFETKLWEI 262 Query: 328 K---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRA 384 K++ I+PL+ V L L VF + K I S + Sbjct: 263 PAEVMKMKRPHIVPLSEQVIMLFKQL----EPISKHHPLVFIGRNDPRKPISKESINQVI 318 Query: 385 LVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRR-RPLDLLRKW 443 +L ++ HG R + T+ + + + H Y LD R+ Sbjct: 319 ELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNSIRGTYNHALYLDGRREM 378 Query: 444 HEKIETWILNEA 455 + +I + + Sbjct: 379 MQWYADYIDSLS 390 >UniRef50_C5SDM2 Integrase family protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SDM2_CHRVI Length = 398 Score = 294 bits (754), Expect = 4e-78, Method: Composition-based stats. Identities = 87/437 (19%), Positives = 144/437 (32%), Gaps = 52/437 (11%) Query: 31 QKFTFERLRRFTLPEGK-KQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGN 88 T + + + ++ +WD D R SG KAFV G+ MTIG Sbjct: 1 MGLTKKTIDALSYQGAGNERFVVWDDDPPGFGLRIYPSGRKAFVLSYRSQGRKRLMTIGT 60 Query: 89 INDWKIDDARAEARRLQTLID-TGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYL 147 +D AR +AR ++ G DP + + TF + Y+ Sbjct: 61 YGVLTLDQARIQARAELAKVETQGADPLAVRQRQ------------AQGETFRDLCQTYM 108 Query: 148 QELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPD 207 + + T Q L +L + +T Sbjct: 109 ERHGQAKKSGT------------------------DDQRRIDRHLLPLWGSLKVPAVTRA 144 Query: 208 YIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSAS 267 +AA S + P LL + P R + + Sbjct: 145 DVAALHSKIGKAHPYEANRVLALLSKMFDLARRWGFVPEGHP------NPARDIDRFKEA 198 Query: 268 KADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI 327 K D + E+L A+ N A L + LLTGAR+ E+ RW DVD+ + +RI Sbjct: 199 KRDRWVTPEELPRLAQAINEEPNQSARFGLWLYLLTGARKSELLRARWDDVDWTRAELRI 258 Query: 328 KDKIEGE-RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALV 386 D G IPL+ LL + + + ++ +R Sbjct: 259 PDTKAGRVHYIPLSAAALALLREIPRVA-----GNPHILPGKLDGAHLVNINKPWDRVRR 313 Query: 387 LAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEK 446 A + + +H LRR+ G+ ++ +++ H + Y R D +R E+ Sbjct: 314 AAGVEDVRVHDLRRTVGSWLAQAGNSLHLIGRVLNHSNQSTTA-IYARFGEDSVRAALEQ 372 Query: 447 IETWILNEAGITIKNNV 463 I+ AG+T +V Sbjct: 373 HGARIIGAAGLTPSADV 389 >UniRef50_D0S9N1 Phage integrase n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0S9N1_ACIJO Length = 415 Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 145/430 (33%), Positives = 218/430 (50%), Gaps = 21/430 (4%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAGKTLRMTIGNI 89 K T + R + K TF WD + T K+++FQ + R+ IG++ Sbjct: 1 MKLTKPAIDRIDCSDKDKPTFFWDEKTPGFGVKVTPKNNKSYIFQGRIGLQNRRIKIGDV 60 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 + WK+DDAR A+ L + GIDP I + +A+ + L + ++ + F W +YL+ Sbjct: 61 DVWKLDDARKYAQELAIMCHKGIDPLIERKKALADNKELLKQEKRKTIKFKDVWFEYLKA 120 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 + R DHI LS G ++ P+ L LSELT + Sbjct: 121 RQPNWRP--------RSYQDHIELSRGG--YDPENNSVYTSQPIFQLFEYKLSELTAGVV 170 Query: 210 AAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKA 269 WL RPT +A AYRL RAF+ W + Y+ ++P V+ VP +K Sbjct: 171 CDWLDH-NDFRPTTSAKAYRLTRAFLNWCEEHEDYENLVPLKSYNSKKVKDKVPSPKAKN 229 Query: 270 DDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKD 329 D CL K+ LK WF V L + + +L L+TG R+ E+ SL+W+DVDF+W + +++D Sbjct: 230 D-CLMKQHLKPWFEEVNKLTSRKIAIFLICSLITGCRKNELLSLKWTDVDFRWKTAKVRD 288 Query: 330 KIEGE-RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNS-KSGKIIEPRSAHNRALVL 387 KIE E R+IPLT YV L L + + ++F S K G I+ P + + Sbjct: 289 KIEDEGRLIPLTAYVESLFLELRK-----NSDSKFIFSSKGAKCGHIVNPYDSLEKICKK 343 Query: 388 AELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKI 447 + ++ HGLRRS+ TLA W ++ G +AQI GHKPSAL E+HY RP+D+LR+ ++ Sbjct: 344 LNIE-LTPHGLRRSYKTLAIWAKINEGSLAQISGHKPSALVERHYIVRPMDMLRETLQEY 402 Query: 448 ETWILNEAGI 457 E WIL + Sbjct: 403 EDWILQQVRN 412 >UniRef50_A1B6Q9 Phage integrase family protein n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1B6Q9_PARDP Length = 393 Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 71/413 (17%), Positives = 144/413 (34%), Gaps = 51/413 (12%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNI 89 K T + +++ FLWD ++ R SG K ++ Q G++ R+ IG Sbjct: 2 TKITKRSVDAAA--PAEQEFFLWDEELKGFGLRVYPSGRKMYLAQYRAGGRSRRVNIGLH 59 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 + AR EA + + + G DP + + A T + +L + Sbjct: 60 GAMTPEMARTEAMKYLSDVRLGADPAGERDRRKA------------SPTIKEFSKRFLSD 107 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 + R I IN + + ++T + Sbjct: 108 HVALHCKASTYGEYERSIDLFIN---------------------PRFGSHRIIDITRADV 146 Query: 210 AAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKA 269 + R + P +L ++ + K+ K Sbjct: 147 VGLHQSMR-HIPYQANRTLGVLSVMFTVAHAWGVRTDGV-------NPCWKVKRYREEKR 198 Query: 270 DDCLQKEQLKSWFSAVR-SLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIK 328 + L ++L + + P A+ +++LLLTG R EI +L+W VD++ +R+ Sbjct: 199 ERYLTPDELARLGKVLDCATEEPEAANCIRLLLLTGCRLSEIQTLKWRYVDYRNGLLRLP 258 Query: 329 DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLA 388 D G +++P+ ++L + + + +V + + + + R A Sbjct: 259 DSKTGAKLVPIGKAAIKVLKTIPKI-----DGNPYVITGRMEGQHLTDMQKPWRRLRKRA 313 Query: 389 ELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLR 441 L + +H LR SF + A + ++ +++GH + Y D +R Sbjct: 314 GLDDLRIHDLRHSFASDALQLGQDLTMIGRLLGHTQVQTTAR-YAHLKTDPVR 365 >UniRef50_B5K270 Integrase n=1 Tax=Octadecabacter antarcticus 238 RepID=B5K270_9RHOB Length = 389 Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats. Identities = 85/434 (19%), Positives = 151/434 (34%), Gaps = 54/434 (12%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAGKTLRM 84 MA FT L K+ + +D L T G K+F G+ R+ Sbjct: 1 MASFEINFTKAALTGAAPAAKGKRDYYYDGKEKGLVLAVTPAGGKSFYLYKRIDGRPERL 60 Query: 85 TIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWE 144 +G D +++AR A + I G +P+ AK S + ++TF + Sbjct: 61 LLGKFPDLTVENARKLAASAKGEIAMGENPQKAKR------------SIRDEMTFGALFT 108 Query: 145 DYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSEL 204 +YL++ L +S + Sbjct: 109 EYLEKHSKVHKRSWAYDERE------------------------VNKFLKHWFKRKISSI 144 Query: 205 TPDYIAAWLSTE-RQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVP 263 + + ++N +R+ + + A Sbjct: 145 EKPEVERLHAKVGKENGLYQANRLLERIRSIFSKATDWGW----NGVNPATGIK-----K 195 Query: 264 VSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWS 323 D LQ E+L +F A+ + N +A + + LL GAR+ ++RW ++ F Sbjct: 196 YREKSRDRFLQPEELPRFFEALSNEPNEVARDFFMISLLAGARKSNTLAMRWDEISFHGE 255 Query: 324 SMRI-KDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHN 382 + RI + K + +I+ L+P E+L + WVF + SG + +P+ A Sbjct: 256 TWRIARTKNDDPQIVHLSPQAMEILKERK-----LHSLSPWVFPGDGASGHLADPKKAWM 310 Query: 383 RALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRK 442 R L A + + +H LRR+ G+ + I+ + +GH+ Y R LD +R Sbjct: 311 RILKEAGIADLRIHDLRRTLGSWQAATGANSYIIGKSLGHRSQQSTAV-YARLNLDPVRD 369 Query: 443 WHEKIETWILNEAG 456 K +L G Sbjct: 370 SVNKATDAMLGYMG 383 >UniRef50_Q3J8Z8 Phage integrase n=2 Tax=Nitrosococcus oceani RepID=Q3J8Z8_NITOC Length = 406 Score = 291 bits (745), Expect = 4e-77, Method: Composition-based stats. Identities = 111/443 (25%), Positives = 176/443 (39%), Gaps = 49/443 (11%) Query: 25 KMALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGA-KAFVFQSVYAGKTLR 83 K A R K T + R P Q F WD+ + R ++G K+FV Q G+ R Sbjct: 2 KPAPQRTKLTKTVVDRLPAPTRG-QAFYWDSALPCFGVRVSAGGVKSFVIQKRIQGREKR 60 Query: 84 MTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAW 143 +T+G + AR EA RL I G +P K A+++ VT A Sbjct: 61 ITLGKYGHLTLMQARKEAARLLGEIAVGRNPLAEK-----------AQAKLRAVTLGEAL 109 Query: 144 EDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSE 203 E YL T RP R I +G T + + PL+ Sbjct: 110 EHYL----------TSRPLKARTI---------------QGTRHTMGKCFSDWMKRPLTS 144 Query: 204 LTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIP--GDLAQDYNVRKM 261 +T D +AA + A R LRA ++ P D + Sbjct: 145 ITRDKVAARHKQLGTASKSHANLAMRYLRAVFNFAMADYTDNEGRPVIADNPVNRLSEAR 204 Query: 262 VPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFK 321 + ++ +LK W AV+ L N A Y ++LLTG RR E +LRW +VD Sbjct: 205 TWFRVERRRTVIKSHELKPWMQAVQRLENGAARDYFMLVLLTGLRRTEALNLRWQNVDLV 264 Query: 322 WSSMRIKDKIEGE-RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSA 380 +++ ++D + +PL+ Y++E+L + +VF ++ G++ R Sbjct: 265 ANTLTVQDTKNHQAHTLPLSDYLTEMLAARLE-----DTYSEYVFSTSR--GRLSNLRGP 317 Query: 381 HNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLL 440 A + S+H LRR+F T+A+ ++VP V ++ HK + Y + L Sbjct: 318 LAEVRSYAGIS-FSIHDLRRTFATVADSLDVPGYAVKALLNHKAANDVTAGYIVVDTERL 376 Query: 441 RKWHEKIETWILNEAGITIKNNV 463 R +KI ++L G+ V Sbjct: 377 RAPMQKITDFMLRAGGLWEGGEV 399 >UniRef50_Q3SUE5 Phage integrase n=6 Tax=Alphaproteobacteria RepID=Q3SUE5_NITWN Length = 400 Score = 291 bits (744), Expect = 5e-77, Method: Composition-based stats. Identities = 78/435 (17%), Positives = 155/435 (35%), Gaps = 62/435 (14%) Query: 30 RQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGA-KAFVFQSVYAGKTLRMTIGN 88 + T ++ +K ++D +V R TSG +AF+ + R+TIG Sbjct: 2 KAHLTERNVKGLQ--PKQKNIIVYDEEVVGFGVRITSGGTRAFILTYRIEARERRLTIGA 59 Query: 89 INDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQ 148 DW + AR EA+RL+ ID G DP + + + + YL+ Sbjct: 60 WPDWSVTAAREEAKRLKREIDQGRDPMAER------------DEARESPNVRQLIDRYLE 107 Query: 149 ELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDY 208 E + ++ + + ++ + +E+ PD Sbjct: 108 EHASKLAKRNRDDQASML----------------------RKLVEPAWGPRKAAEIQPDD 145 Query: 209 IAAWL---------STERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVR 259 + L R+ P +LR + + A++ Sbjct: 146 VDRLLCQIAGGTLGKRGRKPTPVRANRVGEILRKMFNLAIRWRIRTDNPAAGFARN---- 201 Query: 260 KMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVD 319 + + D L +++ +A+ + N A+ ++++LLTGARR E+ RW D Sbjct: 202 -----AEAPRDRYLSTDEIGRLSAALDAHPNRRAADAVRLILLTGARRGEVLGARWDQFD 256 Query: 320 FKWSSMRIKDKIEGERII---PLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIE 376 + +R + P++ + LL + WVF +++ + + Sbjct: 257 LDAAVWIKPAATTKQRRLHRAPISASAAALLRTIRLR---VPKDCEWVFPGDAEGKPLQD 313 Query: 377 PRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRP 436 + AELP + H LR +F +L + ++ +++GH ++ Y Sbjct: 314 IKRFWEDVRTKAELPAVRTHDLRHTFASLLVSGGMTLPMIGKLLGHTQVQTTQR-YAHLL 372 Query: 437 LDLLRKWHEKIETWI 451 D LR E++ + Sbjct: 373 DDPLRAGLEQVGDML 387 >UniRef50_C9NQJ4 Phage integrase n=6 Tax=Gammaproteobacteria RepID=C9NQJ4_9VIBR Length = 415 Score = 290 bits (743), Expect = 8e-77, Method: Composition-based stats. Identities = 69/439 (15%), Positives = 133/439 (30%), Gaps = 51/439 (11%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVY--AGKTL 82 MA + K T +++ K+ L+D D L R +G+K ++ K Sbjct: 1 MAKTTVKLTPTKIKSSK--PKDKEYNLFDGD--GLRLRIKPNGSKHWILNYYRPSNRKRA 56 Query: 83 RMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVA 142 +++G D + +AR + L+ GIDP+ + E + + TF Sbjct: 57 NLSLGKYPDLSLANARKMTLEAKELLAQGIDPQEERKRHQLE------QKANHEHTFINV 110 Query: 143 WEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLS 202 + + + ++ L ++P+ Sbjct: 111 TTKWFEIKKDDVTPDYAVDIWRSL----------------------ELHIFPQLSDVPVR 148 Query: 203 ELTPDYIAAWLSTERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKM 261 ++T + L + L + ++ G++ + Sbjct: 149 DITAPQVIELLKPIEAKGSLETVKRLAQRLNEVMNYATN----CGLVQANPLTGIKAAFK 204 Query: 262 VPVSASKADDCLQKEQLKSWFSAVRSLN-NPIASAYLQVLLLTGARREEIASLRWSDVDF 320 P + L +L A+ + + ++ L T R E + RW ++D+ Sbjct: 205 KPKKEN--MAALTPAELPELMGAIANASIKRTTRCLIEWQLHTMTRPSEASGARWEEIDW 262 Query: 321 KWSSMRIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEP 377 I K E IPLT + ELL V+ ++F S+ K Sbjct: 263 DEKVWTIPPERMKKRREHRIPLTEQMLELLEVIK----PISGHREFIFPSDRDPKKPCNS 318 Query: 378 RSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRR-RP 436 ++A+ + + HGLR T ++ + H Y R Sbjct: 319 QTANMALKRMGFAGRLVSHGLRSLASTTLNEQGFEPDLIEAALAHADDNQVRSAYNRTDY 378 Query: 437 LDLLRKWHEKIETWILNEA 455 L+ R I A Sbjct: 379 LERRRPMMCWWSGHIEEAA 397 >UniRef50_A5W5R9 Phage integrase family protein n=2 Tax=Pseudomonas RepID=A5W5R9_PSEP1 Length = 393 Score = 290 bits (743), Expect = 8e-77, Method: Composition-based stats. Identities = 71/433 (16%), Positives = 145/433 (33%), Gaps = 46/433 (10%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIGNIN 90 T R+ +K L D+ TL A +G K++ F+ + GK R+++G Sbjct: 1 MALTDTAARQAK--PREKGYTLADSLGLTLYV-AETGVKSWHFRFTWLGKQARISLGTYP 57 Query: 91 DWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQEL 150 + + +ARA + + G DPR ++ K E + TF +E++L+ Sbjct: 58 EIGLKEARARRDEAREDVAQGKDPRESRREKKVERLGAKER------TFRRVYEEWLEFR 111 Query: 151 RTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIA 210 + G++ T + S D L + + + + Sbjct: 112 KGGLTESTVKVISNAMELD----------------------VLPAFGLRQIDSIKRADVI 149 Query: 211 AWLSTERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKA 269 + + T + + +++ G+I + + + Sbjct: 150 TLIRRIERRGSITTAVKTRQWIGQVFRYAVA----IGMIEINPTAEMHAVTEKMAPHKNR 205 Query: 270 DDCLQKEQLKSWFSAVRSL-NNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIK 328 L ++ + A+ + ++L+LT R E+ WS++D ++ I Sbjct: 206 P-FLAFTEMPAIIKAIEESQSGLQLQCATKLLILTACRPAEVRKAEWSEIDLDTATWSIP 264 Query: 329 ---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRAL 385 K+ + ++PL+ ELL + +VF + + + + I A N Sbjct: 265 ASKMKMRRDHVVPLSRQAVELLRSML----PISGGLKYVFPNRTDAVRPIGINYAVNLLD 320 Query: 386 VLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRR-PLDLLRKWH 444 S HG R F T + + + H S+ Y L+ R Sbjct: 321 RCGYTGRQSPHGFRHLFSTEMNSRGYNKDWIERQLAHADSSAIRDVYNHATYLEQRRDMM 380 Query: 445 EKIETWILNEAGI 457 + +L A + Sbjct: 381 QAWADLVLPSAAL 393 >UniRef50_C6RMM9 Integrase n=1 Tax=Acinetobacter radioresistens SK82 RepID=C6RMM9_ACIRA Length = 432 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 95/443 (21%), Positives = 176/443 (39%), Gaps = 53/443 (11%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMT 85 M+ R K T + + L D+++ A R + K ++ + G+T+R T Sbjct: 15 MSTPRVKLTKSFIDQLELTPA----IYRDSELIGFAVRVNNSYKTYIVEKKVLGRTVRST 70 Query: 86 IGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWED 145 +G + + AR AR + GI+P K K E + + K K T A+++ Sbjct: 71 LGLHGNITLAQAREMAREKLLQMSQGINPNDEKK-KKISDEDDRVKLEKQKPTVKEAFQN 129 Query: 146 YLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 Y+ + + + I D+ + + L N L E++ Sbjct: 130 YM----------SLKTLKPKTIDDYTTVIDK---------------YLEDWQNFKLDEIS 164 Query: 206 PDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQG----IIPGDLAQDYNVRKM 261 I + +N A R+ RA +S + +IP + + + +K+ Sbjct: 165 RKMIQQKHADLSKNSKAQANMAMRVFRAVYNFSIEHYLDENDQPILIPYNPVKTLSAKKV 224 Query: 262 VPVSASKADDCLQKEQLKSWFSAV-----RSLNNPIASAYLQVLLLTGARREEIASLRWS 316 + + ++Q+ W A+ R + ++ L+LTG RREE SL WS Sbjct: 225 -WNKIKRRKTYINEDQIPDWIRAIFDYKDRGQSLETNRDFMLTLVLTGFRREECESLPWS 283 Query: 317 DVDFKWSSMRIKDKIEGE-RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRS-NSKSGKI 374 +D K+ + D GE +P+ ++ EL+ + + WVF S S SG I Sbjct: 284 SIDLKYGKITSIDPKNGEPHTLPMGDFLWELMKKRRR-----DIQSEWVFPSAKSASGHI 338 Query: 375 IEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHK----PSALAEK 430 + ++ L E+ + H LRR+FG++AE ++ + +++ HK + + Sbjct: 339 VNISKVRSKINELCEIK-FTFHDLRRTFGSIAEGLDYGHYTIKRLLNHKKDSDDNDVTSG 397 Query: 431 HYRRRPLDLLRKWHEKIETWILN 453 Y + LR +IE +L Sbjct: 398 -YIQVSDKRLRAAMNEIEDIVLG 419 >UniRef50_B3T0I4 Putative Phage integrase family protein n=2 Tax=root RepID=B3T0I4_9ZZZZ Length = 422 Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats. Identities = 82/454 (18%), Positives = 153/454 (33%), Gaps = 72/454 (15%) Query: 20 LNWSRKMALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAG 79 L +R + T + + +WD +V+ CR +K ++ ++ G Sbjct: 2 LLATRHEGNVMARITKRTVDSLKP-----GSIVWDGEVSGFGCRCQVKSKVYMLKTAIGG 56 Query: 80 KTLRMTIGNIND-WKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVT 138 + TIG W ++ AR A+R+ I G DP + ++ K K T Sbjct: 57 RQRWFTIGRHGSPWTVEKARTRAKRIIGNIADGKDP------------AKDRDADKNKPT 104 Query: 139 FSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLN 198 + E YL++ + + I +H+ L L Sbjct: 105 VAELCERYLEDYAKEHKKPSSLKSDQKNIENHV---------------------LPLLGR 143 Query: 199 LPLSELTPDYIAAWLSTERQN------------------RPTVTAHAYRLLRAFIKWSNY 240 ++ +T I + + V LL + Sbjct: 144 EFVASVTFADIDRFKRAVKDGKSSRERKPEHQGGPNVTGGKGVANRCLALLSKMFNLAER 203 Query: 241 QKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVR--SLNNPIASAYLQ 298 R + +K + L ++L + + NP A A ++ Sbjct: 204 WGWCS-------VGSNPCRHVDRYPENKREKFLSDKELAALAEVLNKSESENPYAVAAIR 256 Query: 299 VLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDV 358 +L+ TGAR EI L W+ VD + + + + D G++ + L+ ++L L N Sbjct: 257 MLIFTGARLGEILHLEWAHVDMERAMLLLPDPKTGQKAVFLSAPALDVLANLPHMKN--- 313 Query: 359 NKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQ 418 V ++ + R A L + LH LR SF ++A + ++ + Sbjct: 314 --NPHVICGEKDGSHLVNLQKPWGRIRKRAGLEDVRLHDLRHSFASVAASGGLSLPMIGK 371 Query: 419 IMGHKPSALAEKHYRRRPLDLLRKWHEKIETWIL 452 ++GH +A + Y D L+ +E I I Sbjct: 372 LLGHTQAATTAR-YAHLAADPLKAANEAIGQRIA 404 >UniRef50_C9CXZ5 Phage integrase n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9CXZ5_9RHOB Length = 391 Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats. Identities = 74/432 (17%), Positives = 148/432 (34%), Gaps = 57/432 (13%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAG-----KTLRM 84 K T R+ K T+LWD + + SG K ++++ G +T M Sbjct: 1 MKLTKRRIDTAEYDPA-KPTYLWDDSLAGFGVKVLQSGKKRYIYKYRTHGGGRRAQTRWM 59 Query: 85 TIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWE 144 TIGN + ++ AR A ++ G DP+ K ++ + W Sbjct: 60 TIGNYGEIPLETARNIALECAAMVARGQDPQSDK------------IKKREAPSLVDLWG 107 Query: 145 DYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSEL 204 + + + T R Y + + +L ++++ Sbjct: 108 RFEESDMKRLKPATIRDYRSLW----------------------KNILEPALGKRRVADI 145 Query: 205 TPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPV 264 + + + P + +L + + + R + Sbjct: 146 SRADVDRLHRSMSDT-PYQANRSIAVLSKMMTLAEIWEWRD-------QGTNPCRYVTRH 197 Query: 265 SASKADDCLQKEQLKSWFSAVRSL-----NNPIASAYLQVLLLTGARREEIASLRWSDVD 319 K + L E+L+ +A+ +L P + ++LLL GARR EI++ W+ +D Sbjct: 198 REGKRERYLSTEELERLGAALTNLVDLGLLWPDMANLFRLLLLVGARRSEISNCEWNWID 257 Query: 320 FKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRS 379 ++ + + D G + + L+ +L + +VF + I+ Sbjct: 258 WERRIIALPDSKTGAKPLFLSNEAITVLQNQKITTRHQS--SKFVFPGAKANKAIVNLSK 315 Query: 380 AHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDL 439 AEL ++ +H LR + ++A V I+ +++GH + + Y D Sbjct: 316 PWKLICEEAELENLRIHDLRHTAASIAVGQGVALPIIGRLLGHTQTQTTAR-YAHVDADP 374 Query: 440 LRKWHEKIETWI 451 K I I Sbjct: 375 ALKAANAIGQAI 386 >UniRef50_B8J055 Integrase family protein n=3 Tax=Desulfovibrio RepID=B8J055_DESDA Length = 402 Score = 289 bits (739), Expect = 2e-76, Method: Composition-based stats. Identities = 68/435 (15%), Positives = 139/435 (31%), Gaps = 52/435 (11%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTI 86 K T ++R K D + L + +G K + + GK R++ Sbjct: 2 PPTNKLTEIKIRNIK--PNGKIERFVDGE--GLYLETSVAGGKHWRMKYRVNGKEKRLSF 57 Query: 87 GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDY 146 G D + +AR + + +DP K +A+ + TF +Y Sbjct: 58 GPWPDISLKEAREMRDEAKRQLRESLDPSAEKK---------KAKQEQAAPTFRDIALEY 108 Query: 147 LQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTP 206 ++ R+ +A R R D + P++ +TP Sbjct: 109 VEHQRSVWAASHTRTVEGRLALD----------------------VYPAFGAKPIAAVTP 146 Query: 207 DYIAAWLSTERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVS 265 I A L + R + K++ G++ D +D P + Sbjct: 147 QDILAMLRKIEERRAFETASRVLGFCSLIFKYAV----TLGLVEADPCRDLRPAL-KPYA 201 Query: 266 ASKADDCLQKEQLKSWFSAVRSLNNP-IASAYLQVLLLTGARREEIASLRWSDVDFKWSS 324 + + +++ + A+ + A L LT R EI + W++++F+ Sbjct: 202 KGQLAAITKPKEVGALMRAIDDYKGSVVVRAALLFSALTFCRPGEIRHVEWAEINFEREE 261 Query: 325 MRIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAH 381 I K E +PL+ E+L+ + +VF + + + + Sbjct: 262 WTIPAEKMKGRTEHRVPLSRQALEVLHGIM----PYTGSAKYVFPTPRSNNRPLSENGVL 317 Query: 382 NRALVLAE-LPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRR-PLDL 439 + + ++ HG R TL + + + HK + Y R + Sbjct: 318 SALRNMGYTKEQMTAHGFRSMASTLLNELGHRPDAIEAQLAHKGADKIRATYNRAEYMKE 377 Query: 440 LRKWHEKIETWILNE 454 R + ++ + Sbjct: 378 RRNLMQAWADYLEDL 392 >UniRef50_B7KUI7 Integrase family protein n=1 Tax=Methylobacterium chloromethanicum CM4 RepID=B7KUI7_METC4 Length = 414 Score = 288 bits (738), Expect = 3e-76, Method: Composition-based stats. Identities = 73/444 (16%), Positives = 135/444 (30%), Gaps = 58/444 (13%) Query: 33 FTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNIND 91 T + GK++ + DA + L +G K++ + AGK ++T+G Sbjct: 4 LTARAVELAKPDPGKRR-EVPDAALPGLYLVVQPAGGKSWAVRYRAAGKPRKLTLGPYPR 62 Query: 92 WKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELR 151 + DAR AR + G DP K E + + F DY++ Sbjct: 63 LGLADAREAARTALHAVAEGRDPAGEKQAARVEV------AAVQTMRFGAVAADYIERYA 116 Query: 152 TGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAA 211 + + + + + + Sbjct: 117 KPRNRSWRET---------------------ESFLTRTLDATDKWQEKDVRAIGRKDVRD 155 Query: 212 WLSTERQNRPTV-TAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKAD 270 L ++ + LR F W+ + P D Sbjct: 156 ALDAVVARGASIHANRLFAALRRFFAWTVERGILDA--------SPMAGLKPPSPEISRD 207 Query: 271 DCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIK-- 328 L +L + + A + P +Q+L+LTG RR E+ W + D ++ I Sbjct: 208 RVLTDAELVAVWKAAGEVGYPF-GPVVQLLILTGQRRSEVVEAEWREFDLDGATWTIPRE 266 Query: 329 -DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRAL-- 385 K + ++PL P ++L + + +F + ++ A +R Sbjct: 267 RAKNDRAHVVPLAPQAVKILRCIP----CVGTRSRLLFTTTGETA-FSGVSKATDRLQGL 321 Query: 386 ------VLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKP---SALAEKHYRRRP 436 E+ LH LRR+F + + V +V + + H S + + R Sbjct: 322 SAKHLPEGIEVEPWRLHDLRRTFASGCARLGVAVHVVEKALNHVSGTHSGIVGVYQRHSY 381 Query: 437 LDLLRKWHEKIETWILNEAGITIK 460 D R E + G K Sbjct: 382 GDERRCAMELWAAHLDGLVGGAAK 405 >UniRef50_A5CCP8 Phage-related integrase n=25 Tax=Orientia tsutsugamushi RepID=A5CCP8_ORITB Length = 414 Score = 287 bits (735), Expect = 6e-76, Method: Composition-based stats. Identities = 85/444 (19%), Positives = 162/444 (36%), Gaps = 53/444 (11%) Query: 26 MALSRQ--KFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT----SG--AKAFVFQSVY 77 M ++ KF LR+ +P+G+K + D D+ L + + G K ++ + Y Sbjct: 1 MIMTSISSKFINRALRKIKIPKGEKLLIIHDPDIIGLKLKISCTVCGGIVRKTWILEQKY 60 Query: 78 AGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAES---LQAESRK 134 ++L++ I I +AR AR L+TL+ GIDPR K + E + E + Sbjct: 61 KNQSLKIRIVEFPYLSIKEARKIARELKTLMANGIDPRAVKHQQQIEENENRIKERERKA 120 Query: 135 TKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLA 194 +TF Y++E + K AD ++ ++ Sbjct: 121 NDITFKELCYKYIEEYAKIYTINWKEN------ADRVHTYAQ------------------ 156 Query: 195 SLLNLPLSELTPDYIAAWLSTERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLA 253 +L +S++ I + + LR + G+I + Sbjct: 157 ALYEKKISKIRMSDIEPIFNDISKEGKYATANALLATLRTIFNKAIKW----GLIENNPT 212 Query: 254 QDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASL 313 K+ + L +++ + + +P+ + + L TGAR+ + + Sbjct: 213 LGIEQHKL-----QARERRLSYDEMGRFLQVLCGEASPLIRDFALLALYTGARKSNVLEM 267 Query: 314 RWSDVDFKWSSMRIKDKIE-GERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFR-SNSKS 371 W ++DF+ I + IPLT E+L ++ WV S S+S Sbjct: 268 EWDNIDFERKIWHIPKTKNGKAQNIPLTDEAMEILQARK-----LISTSKWVLPSSTSES 322 Query: 372 GKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKH 431 G + P +A A + + +H LRR+F + ++ + H Sbjct: 323 GHLSHPNTAWKIICEKASIKNFRIHDLRRTFASCMGDAGESQRTISIALNHINPNST-IP 381 Query: 432 YRRRPLDLLRKWHEKIETWILNEA 455 Y ++L+R++ K I A Sbjct: 382 YTIACMELVREYMSKAIQIISECA 405 >UniRef50_Q1RJE3 Integrase n=9 Tax=Rickettsia RepID=Q1RJE3_RICBR Length = 388 Score = 286 bits (733), Expect = 9e-76, Method: Composition-based stats. Identities = 82/424 (19%), Positives = 145/424 (34%), Gaps = 55/424 (12%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRM 84 M + FT E L+ PE K+ D L + G+K F V + K R+ Sbjct: 6 MPVKSLLFTKEMLQEIKAPEAKRD-IYKDTKEKGLLLIVSYGGSKIFYLGVVLSKKYHRI 64 Query: 85 TIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWE 144 IG I DAR +A L+ I G +P KA + TF ++ Sbjct: 65 KIGVFPYLSIIDARLKASELKGKIAQGYNPIEEKAR------------LSKEPTFKEFYD 112 Query: 145 DYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSEL 204 YL E + + K + + L N +S + Sbjct: 113 RYLDEYSKINNKRWK--DYAASVDRYAK----------------------HLYNRKISTI 148 Query: 205 TPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPV 264 I + + +L + + L V + Sbjct: 149 QKADIQELFNKLTKTGKYGANRFLEVLSPVFSKAIEWE---------LLTVNPVIGIKKH 199 Query: 265 SASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSS 324 D L +E++ +F+A+ N + + + L T R++ + ++RW + F Sbjct: 200 KEQSRDRYLTREEIPRFFTAISEEQNQVMKDFFLIALYTSVRKDNVLTMRWEQISFADKQ 259 Query: 325 MRIKDKIEG-ERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRS-NSKSGKIIEPRSAHN 382 + + D G +PL E+L + + WVF S S SG + EP+ A Sbjct: 260 LYLPDTKNGDPHRLPLLDQAVEILKARKEQ-----SDSIWVFPSETSSSGHLQEPKKAWK 314 Query: 383 RALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRK 442 R A + ++ +H LRR+ + ++ Q++ H+ Y R D R+ Sbjct: 315 RICKKAGIENLRIHDLRRTIPSWMAMTGANQYVIGQLLNHRDPRSTAV-YTRLATDTARE 373 Query: 443 WHEK 446 + ++ Sbjct: 374 YMQR 377 >UniRef50_A1ATP4 Phage integrase family protein n=2 Tax=Desulfuromonadales RepID=A1ATP4_PELPD Length = 449 Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats. Identities = 72/468 (15%), Positives = 150/468 (32%), Gaps = 81/468 (17%) Query: 27 ALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMT 85 A+ + FT +R+ E ++ R SG+K +++ + GK +M Sbjct: 8 AMKKTTFTDTMIRKLKPTESD----YTRSEGNGFTIRVMPSGSKTWLYLYAFDGKRRKMN 63 Query: 86 IGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWED 145 +G+ D ++ AR + + IDP QAE R+ T + D Sbjct: 64 LGSYPDVTLETARGRFEDAKRKVKNNIDPM--------AEAEEQAEERRKAPTVADLVHD 115 Query: 146 YLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 Y++ + + + + + +++T Sbjct: 116 YIERHAKRFKRSWAKD-----------------------EQILNREVVPAWGKRKAADVT 152 Query: 206 PDYIAAWLSTERQN-RPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPV 264 I L P + + ++++R W+ Q Q +P Sbjct: 153 KRDILRLLEEIVNRNAPAMANNTFQIIRKMFNWAVEQDILQ--------HTPCTGVKLPS 204 Query: 265 SASKADDCLQKEQLKSWFSAV---RSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFK 321 D L + ++K+ + + + + L+++L T R E+ L S++D Sbjct: 205 PKLSRDRVLSESEIKTLWENLGRPDAGMSDGVRRALRLILTTAQRPGEVTGLHTSELDGC 264 Query: 322 WSSM-RIKDKIEGERIIPLTPYVSELLNVLAQSPNS------DVNKEGWVFRSNSKSG-K 373 W ++ + K + L+ E++N D G+VF + KS K Sbjct: 265 WWTIPAERAKNGKTHRVYLSGLALEIINQAIAQAKKSRETPYDQEYNGYVFPCHHKSKEK 324 Query: 374 IIEPRS---AHNRALV----------------------LAELPHISLHGLRRSFGTLAEW 408 + + A RAL + H + H LRR+ T Sbjct: 325 PMGDTALAVAVGRALASPLTDDKGNPLFTAAGKPATENRLGIDHFTPHDLRRTTATFMAS 384 Query: 409 VEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWILNEAG 456 + ++ ++ H + + + + R ++ E E + Sbjct: 385 MGFMDEVIDAVLNHAKQGVIKVYNQYRYDVEKQQALETWENKLKTILA 432 >UniRef50_Q1NM52 Phage integrase n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NM52_9DELT Length = 406 Score = 286 bits (731), Expect = 2e-75, Method: Composition-based stats. Identities = 74/440 (16%), Positives = 148/440 (33%), Gaps = 59/440 (13%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNI 89 + +LR+ + + L D L SG ++++ + + GK R+T+G Sbjct: 1 MGLSDAQLRKIR--PRESRFELTDG--KGLVLLVLPSGRRSWLLRYQFEGKPRRITLGEY 56 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 D + AR + +++I G+DP + + + + + KT T S +Y Sbjct: 57 PDMSLLQARNASEATRSIIKQGLDPALKR--------TEEKTAHKTSPTVSDLLTEYWD- 107 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 + + S K + L ++E+T Sbjct: 108 -----------------------MELKESPSGKERRRLVEKDVLPPWGKRKVAEITRRDA 144 Query: 210 AAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKA 269 A L T R P +L ++ + + + + Sbjct: 145 ALLLDTVRARAPVTGNRLQGVLVRMFNFAAERGVLE---------HSPLMGLRKKKEQPR 195 Query: 270 DDCLQKEQLKSWFSAVRSLN-----NPIASAYLQVLLLTGARREEIASLRWSDVDFK-WS 323 L +++K + A+ N ++ L+++LLTG R E+ + W ++D W+ Sbjct: 196 SRVLADKEIKLLWDALALDNTAMDIYRVSKLALKMILLTGQRPGEVCGMTWDEIDGDTWN 255 Query: 324 SMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNR 383 + K + +PL E++ Q+ +VF+S+ I P S Sbjct: 256 IPAERMKSKEPHNVPLGSMALEIIE---QARRYSPRGSTFVFKSSHFKEGPITPHSLSKA 312 Query: 384 ALV---LAEL-PHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDL 439 L + + H LRR+ T + V + +++GHK + + R Sbjct: 313 ILRHWQEMGVTERFTPHDLRRTLRTRLAEIGVDDVVGERVLGHKLQGIMAVYNRHSYDKE 372 Query: 440 LRKWHEKIETWILNEAGITI 459 R+ E + I Sbjct: 373 KRQALALWERKLREIVAIES 392 >UniRef50_A3VAJ4 Site-specific recombinase, phage integrase family protein n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VAJ4_9RHOB Length = 392 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 75/436 (17%), Positives = 138/436 (31%), Gaps = 63/436 (14%) Query: 30 RQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGN 88 +Q T + L P K+ + D V L R T+GAK F G R+ IG Sbjct: 8 KQMLTTKSLDAMP-PATTKRYEVRDQKVNGLHVRVSTTGAKVFYTLVRPNGSRRRIKIGP 66 Query: 89 INDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQ 148 + DAR A + ++ G E E + T +++ Sbjct: 67 YPVVSLADARRRAMEIARDVELG------------EFEKTPEVPEASADTLGEMIPKFIE 114 Query: 149 ELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDY 208 + KR + L + P+ ++ Sbjct: 115 LHAKPNTKDWKRT-------------------------ESVLHKFDGLKDRPIDQIRRQD 149 Query: 209 IAAWLSTERQNR-PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSAS 267 ++ L N PT A ++ + W + D+ P Sbjct: 150 VSKVLDGIIANGTPTRANRALSAIKKLMNWCVMRG--------DIETSPVALLRPPTREV 201 Query: 268 KADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI 327 + D L ++++ + + + P +L++LL++G RR E+A +RWS+++ + Sbjct: 202 QRDRVLSDAEIRAIWQHSDAEDYPF-GPFLKLLLISGQRRSEVAGMRWSELNLDEGIWEL 260 Query: 328 KD---KIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRA 384 K I+PL ++L L + +VF + +S I R Sbjct: 261 PANRVKNARLHIVPLPVQAVDILRGLHR-----FLDSDFVFTTTGRSA-ISGFGRLKERV 314 Query: 385 LVLA--ELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKP---SALAEKHYRRRPLDL 439 P H RR+ T + V ++ + HK S + + R + Sbjct: 315 DTALPEGTPDWRFHDFRRTASTGMAKLGVMPHVIDAVTNHKSGVVSGVGATYNRYTYFNE 374 Query: 440 LRKWHEKIETWILNEA 455 R+ + I Sbjct: 375 KREALAQWAAHIDEIL 390 >UniRef50_A3V904 Phage integrase n=5 Tax=Rhodobacteraceae RepID=A3V904_9RHOB Length = 445 Score = 285 bits (729), Expect = 3e-75, Method: Composition-based stats. Identities = 82/441 (18%), Positives = 144/441 (32%), Gaps = 51/441 (11%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAG-KTLRMT 85 + T + + P K++ +D V L TSG + + KT + Sbjct: 1 MPVIDLTAQFVASAVCPSTKRKEVFFDRRVKGLVLEVRTSGGMTYYMRYTDDRSKTRYIK 60 Query: 86 IGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWED 145 + N+ D + AR R+ + + GIDP +AVK TF + Sbjct: 61 LANVGDITLPQARGLCRQHRNKLALGIDPLAERAVKRL------------VPTFGDFVRE 108 Query: 146 YLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 ++ + S K + L + + E+T Sbjct: 109 -----------------------RYLPFAQANKRSWKTDETLARTHLTPQLGTMHMDEIT 145 Query: 206 PDYIAAWLSTERQNR--PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVP 263 + + + + P LLR + K G+ + + Sbjct: 146 IEDVLSLQQIGLKAGAAPASINRRLILLRYMFNLAWRDWKIAGV-----TGNPTHGVRLL 200 Query: 264 VSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWS 323 ++ + ++ E+L + AV+ N + + LLLTG RR E+ W DVD Sbjct: 201 KENNQKERYVRAEELALLYRAVKESQNKMLQHIVAFLLLTGTRRNEVLHATWEDVDLIKG 260 Query: 324 SMRIKDKIEG-ERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHN 382 RI G R +PL +L + ++F + + A N Sbjct: 261 MWRIPQTKSGFARHVPLNDGAYAVLQQMQGRSQ-----SHYIFGNPKTGKPYVHVWYAWN 315 Query: 383 RALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRK 442 A V A LP + LH LR +F +L V +++GH ++ Y + L Sbjct: 316 SARVKAGLPDVRLHDLRHTFASLLINNGRSIYEVQKLLGHTQIKTTQR-YAHLTQETLLD 374 Query: 443 WHEKIETWILNEAGITIKNNV 463 + G+ + NV Sbjct: 375 ASNIGTAAVAATLGMVPQRNV 395 >UniRef50_C6MJ08 Integrase family protein n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MJ08_9PROT Length = 418 Score = 284 bits (728), Expect = 3e-75, Method: Composition-based stats. Identities = 70/443 (15%), Positives = 135/443 (30%), Gaps = 50/443 (11%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNI 89 K T +++ K + D + +GAK + +A K + +G Sbjct: 1 MKLTDTAIKKAK--PQAKPYRIADGG--GMYIEVKPNGAKYWRMAYRFADKQKTLALGVY 56 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 D + DAR + L+ G DP K + + +F + ++ Sbjct: 57 PDVTLADARDRRNEARKLLANGADPGAVKQSQK------KQAKIAASNSFELIAREFHSL 110 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 S + N P+SE+ + Sbjct: 111 KTPMWSTNHAADWIK----------------------TLEREIFPKFGNYPISEIDAPAV 148 Query: 210 AAWLSTERQN-RPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 + V A + +RA ++ + + ++ P K Sbjct: 149 LDAIRAIESRDAHEVAARVLQRVRAVCAYAIATGRARHNPASEIKGALA-----PQPKIK 203 Query: 269 ADDCLQKEQLKSWFSAVRSLN-NPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI 327 L +++L + AV + P+ +L+LT R E+ +W + D +I Sbjct: 204 HFAALTEKELPDFLRAVAAYPCYPLTKYATALLMLTFVRTGEVRGAKWCEFDLDAKLWKI 263 Query: 328 K---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRA 384 K I+PL E+L L + +F + + +GK+I + Sbjct: 264 PAERMKSREPHIVPLAKQAIEILGEL----HPLTGHGEHLFPNRTGNGKVISENTVLKVI 319 Query: 385 LVLAELPHISLHGLRRSFGTLAEWVE-VPTGIVAQIMGHKPSALAEKHYRRR-PLDLLRK 442 L ++ HG R T V + ++ + H + Y R ++ Sbjct: 320 ERLGYKGRMTGHGFRTIASTYLNGVGMIRPDVIEAQLAHTEANATRAAYNRANYMEYRAA 379 Query: 443 WHEKIETWILN-EAGITIKNNVD 464 + + EAGIT+ D Sbjct: 380 MMQFWADTLDAMEAGITLPKWTD 402 >UniRef50_P76542 Putative prophage CPZ-55 integrase n=6 Tax=Enterobacteriaceae RepID=INTZ_ECOLI Length = 402 Score = 284 bits (727), Expect = 5e-75, Method: Composition-based stats. Identities = 68/435 (15%), Positives = 135/435 (31%), Gaps = 48/435 (11%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTI 86 +S+ T + + K L D+ L +G+K + F+ + I Sbjct: 1 MSKTPLTAKAIDAAQ--PQDKPYKLTDSLTPGLFLLVHPNGSKYWRFRYWLNKREFLQAI 58 Query: 87 GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDY 146 G + +AR A ++LI GI+P + A A F ED+ Sbjct: 59 GVYPLITLKEARRRATESRSLIANGINPVEQARKEKAIDALNMAAG------FKKVAEDW 112 Query: 147 LQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTP 206 G S + + D L + ++T Sbjct: 113 FATRVGGWSESYAKQVRSALEKD----------------------VYPVLGKRSIVDITA 150 Query: 207 DYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSA 266 + A L + + P R + K++ + DL R+ Sbjct: 151 RDVLALLQKKERTAPEQARKLRRRIGEIFKFAVITELVTRNPVADLDTALKARRP----- 205 Query: 267 SKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMR 326 + + ++ +++ A+ + +++L+LT R E+ RW ++ + +++ Sbjct: 206 -GHNAWIPISEIPAFYKALERAGSVQIQTAIRLLILTALRTAELRLCRWEWINLEDATIT 264 Query: 327 IK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNR 383 + K ++PL+ ELL + +VF + SA + Sbjct: 265 LPAEVMKARRPHVVPLSRQAVELLQD----QFTRSGYSAFVFPGRFMDKPLS--ASAILK 318 Query: 384 ALVLAELPHI-SLHGLRRSFGTLAEWVE-VPTGIVAQIMGHKPSALAEKHYRRRPLDLLR 441 AL I + HG R +F T + + H P + + + L R Sbjct: 319 ALERIGYKSIATGHGWRTTFSTALNESGRYSPDWIEIQLAHVPKGIRGVYNQAAYLKQRR 378 Query: 442 KWHEKIETWILNEAG 456 + I + Sbjct: 379 AMMQDYADAIDSILA 393 >UniRef50_B8ERI0 Integrase family protein n=1 Tax=Methylocella silvestris BL2 RepID=B8ERI0_METSB Length = 400 Score = 283 bits (725), Expect = 8e-75, Method: Composition-based stats. Identities = 79/435 (18%), Positives = 165/435 (37%), Gaps = 51/435 (11%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTI 86 +++ T + + K+ + D L SGAK++ ++ + GK ++TI Sbjct: 1 MAK-NLTIKGIAALK--PQAKRCEVPDGHTRGLYFVVQPSGAKSWAYRFSFEGKPKKLTI 57 Query: 87 GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDY 146 G+ + AR+ A T + G +P K V+ Sbjct: 58 GSYPAIDLSRARSIALASATKVANGRNPAAEKKVER------------------------ 93 Query: 147 LQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTP 206 ++ R +++ H+ +R +S K + L+ L+E+T Sbjct: 94 -EKARKPSDLDLVDVVVAQFVVKHVEPKTRP-QSAKEMKRILKREILSRWSGRRLTEITR 151 Query: 207 DYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSA 266 I L P + + ++ + I WS + L+ P A Sbjct: 152 SDIRDLLEAIADRAPIMANRVFEVISSLINWSISMEM--------LSASPIAGLRKPSPA 203 Query: 267 SKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMR 326 + D L +++L + A P + ++VL+L+G RR E++ + WS++DF+ S Sbjct: 204 KRRDRILSEKELTDVWQASERAGWP-YGSMIKVLILSGQRRSEVSDMTWSEIDFEERSWT 262 Query: 327 ---IKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNR 383 ++ K IIPL+P + ++L L + ++ G+VF + + I Sbjct: 263 LPAVRTKNGKGHIIPLSPTIIDVLLTLPRI----GSESGFVF-TTNGFSPIRNFARRKKA 317 Query: 384 ALVLAELPH-ISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKP---SALAEKHYRRRPLDL 439 ++ + + +LH LRR+F T ++V +V +++ H + + + Sbjct: 318 LMMSCQSENNWTLHDLRRTFATGMARLKVELPVVEKLLNHSSGTFGGVQGVYQQYDFQSE 377 Query: 440 LRKWHEKIETWILNE 454 R+ +++ Sbjct: 378 KREAMNLWASYVNKI 392 >UniRef50_C8QZM9 Integrase family protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QZM9_9DELT Length = 409 Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats. Identities = 68/444 (15%), Positives = 147/444 (33%), Gaps = 61/444 (13%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNI 89 KF+ ++R K+ +L + + R SGAK ++F + GK M +G+ Sbjct: 1 MKFSEAKIRNLR--PQSKKYYLR--EANGFSVRIMPSGAKTWLFIYTFDGKRKEMNLGHY 56 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 ++ AR + R L + G DP + E R+ S ++Y+ + Sbjct: 57 PAVTLEAARRKYRAAFDLFEQGNDP--------VAMHLEKKEERRRTPFLSDLVDEYINK 108 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 + + + + + +++ + Sbjct: 109 HAMRFKRSWAKDQA-----------------------ILNRDVVPAWGQRKAVDISKRDV 145 Query: 210 AAWLSTERQNR-PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 L P + + ++++R ++ ++ + +P Sbjct: 146 ILLLEKIVDRGSPGMANNCFQIIRKMFNFAVDREILE--------ISPCTGVKMPAPKMA 197 Query: 269 ADDCLQKEQLKSWFSAVRSLNNPI-ASAYLQVLLLTGARREEIASLRWSDVDFKWSSM-R 326 D L +E+++ +S + ++++L+T R E+ + +S+++ +W ++ Sbjct: 198 RDRVLSEEEIRVLWSGLERAKISHEVQRAIKLILVTAQRPGEVMGMDFSEIEGRWWTIPA 257 Query: 327 IKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRS-----AH 381 + K + LT EL+ N G+VF S S AH Sbjct: 258 DRAKNGKAHRVYLTDTALELIGE---------NTGGFVFPSPRHRENPRPIGSNAMTVAH 308 Query: 382 NRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLR 441 R L + H LRR+ T + ++ I+ H + + + R + Sbjct: 309 RRNKDKIPLEDFTPHDLRRTAATFMAEMGTMDEVIDAILNHSKMGVIRVYNQYRYDTEKQ 368 Query: 442 KWHEKIETWILNEAGITIKNNVDM 465 E E + G K D+ Sbjct: 369 ATLEAWERRLQRILGAEKKEQGDI 392 >UniRef50_Q5LLE0 Site-specific recombinase, phage integrase family n=2 Tax=Rhodobacteraceae RepID=Q5LLE0_SILPO Length = 400 Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 75/435 (17%), Positives = 143/435 (32%), Gaps = 63/435 (14%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTI 86 + R K T + + K+ D + L R TSG K F +GK R+TI Sbjct: 1 MKR-KLTTKFIESQKPNPS-KRLDFRDELMPGLVLRISTSGTKTFCLHKRISGKMRRLTI 58 Query: 87 GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDY 146 G + +AR R++ I+TG E +TK T DY Sbjct: 59 GRFGVVSLAEARERVRKVLYEIETG------------RFEDRTGVEVETKPTLGDVIPDY 106 Query: 147 LQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTP 206 +++ + KR A+L + E+ Sbjct: 107 IEKHAKVHNRDWKR-------------------------KEALLAKFAALHVKRIDEIKR 141 Query: 207 DYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSA 266 + ++ P A L+ + W + Sbjct: 142 ADVVKACDLIHKSAPVSANRALAHLKHLMGWCVERGMIDA--------SPIAGMKPLSKE 193 Query: 267 SKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMR 326 + L ++L + ++A + P +++L+L+G RR E+A +RW+++D + Sbjct: 194 RSRERVLTDDELGALWTACDAEGYPF-GDCMKLLILSGQRRAEVAEMRWTELDLEKRLWT 252 Query: 327 IKD---KIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNR 383 + K + +P+T + ++L + + +VF + KS + +R Sbjct: 253 LPSQRAKNGRQHTVPITDAMIDVLRRVPR-----FLGSDYVFTTTGKS-PVSGFGRLKDR 306 Query: 384 ALVLA--ELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKP---SALAEKHYRRRPLD 438 +H LRR+ T + VP + ++ HK S +A + D Sbjct: 307 LDKALPEGTEPWIIHDLRRTMSTNMAMLGVPQPVTEALLNHKTGVVSGVAAIYNVYSYTD 366 Query: 439 LLRKWHEKIETWILN 453 + E+ + Sbjct: 367 EKCEALEQWNRHLTK 381 >UniRef50_Q5P749 Similar to phage-related integrase n=3 Tax=Bacteria RepID=Q5P749_AZOSE Length = 411 Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 96/447 (21%), Positives = 162/447 (36%), Gaps = 63/447 (14%) Query: 29 SRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAF-VFQSVYAGKTLRMTI 86 +R FT ERL P+ K+ D T L R ++ G K+F V++ + AG+ R+T+ Sbjct: 6 TRFPFTKERLAALPTPDAGKRDTYHDTKTTGLQLRVSATGVKSFSVYRRLKAGQPERVTL 65 Query: 87 GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDY 146 G ++ AR A + I++G +P K AE T + + +Y Sbjct: 66 GKFPAMTVEQARKAAALVNAEIESGANPAATKRAFKAE------------PTLTEFFAEY 113 Query: 147 LQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTP 206 + + N LSE+ Sbjct: 114 ------------------------GTRHGEKKLAWPADVQRFRDYLQKPMGNKRLSEIDR 149 Query: 207 DYIAAWLSTERQNRP--TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPV 264 IA LS + + L + + + AQ V Sbjct: 150 AMIAKALSDAEKAGKSVATVRNIRALASGVFGKAVEWGRLD----FNPAQGVKVAG---- 201 Query: 265 SASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSS 324 D LQ ++L +F+AV + + ++ + LLTGARR + ++ W ++D Sbjct: 202 KKVSRDRFLQADELPRFFAAV-AEEDDTMRDFILLALLTGARRANVCAMHWHELDLAAGV 260 Query: 325 MRIKDKIEGE-RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNR 383 RI GE + + L P +L D G+VF ++G ++EP+ A R Sbjct: 261 WRIPRTKNGEPQTVTLCPEAVMILEARK-----DATGGGFVFPGTGRTGHVVEPKKAVER 315 Query: 384 ALVLAELP-------HISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRP 436 + A +P +LH LRR+ G+ I+ + + HK Y R Sbjct: 316 VMARAGIPYGRDVPNGATLHDLRRTLGSWQARTGASLAIIGKSLNHKSQQATA-IYARLD 374 Query: 437 LDLLRKWHEKIETWILNEAGITIKNNV 463 LD +R+ + +L AG+ +V Sbjct: 375 LDPVRQSVNTATSAMLEAAGLKDGADV 401 >UniRef50_D2L516 Integrase family protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L516_9DELT Length = 417 Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats. Identities = 70/439 (15%), Positives = 142/439 (32%), Gaps = 51/439 (11%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAGKTLRM 84 M T +R K ++D L + T G K + F+ ++ GK + Sbjct: 1 MPKKTIPLTDVAIRNAKA--ADKPVKMFDGA--GLFLQVTPTGGKLWRFKYLFDGKEKLL 56 Query: 85 TIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWE 144 +G D + AR + L+ G+DP + A+ + ++ + TF+V Sbjct: 57 ALGKWPDVGLKMARQRRDEARALVAQGVDPSEKRKQDRAD---AEGQAVENANTFAVVAR 113 Query: 145 DYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSEL 204 D+ + S R N+P++ L Sbjct: 114 DWHAKQVKVWSEGHAAKILARM----------------------EQHLFPVFGNIPITTL 151 Query: 205 TPDYIAAWLSTERQNR-PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVP 263 I L + A ++ + + DL P Sbjct: 152 RAPAILPTLRDIEDKGNHETAKRLRQYCEAVFTFAISTGIAERNVGADLRGALA-----P 206 Query: 264 VSASKADDCLQKEQLKSWFSAVRSL-NNPIASAYLQVLLLTGARREEIASLRWSDVDFK- 321 A+ + + + A+ +P+ A L++ L R E+ WS++D Sbjct: 207 CRATNRPAIIDPKGVAQLLRAIDGYQGSPVTVAALRLAPLVFVRPGELRQAEWSEIDLDA 266 Query: 322 -----WSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIE 376 WS K K+ + ++PL+ +++ + S ++ ++F N G+ + Sbjct: 267 ADGPRWSIPAEKMKMRRDHVVPLSKQAVDIITEIY----SLTGQDRYLFPCNRTKGRCMS 322 Query: 377 PRSAHNRALVLAELP--HISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPS-ALAEKHYR 433 A N AL + HG R TL + + ++ + + H ++ + R Sbjct: 323 -NMALNAALRRMGYEQGEMCAHGFRAMASTLLNELGWNSDLIERQLAHAERNSIRAAYNR 381 Query: 434 RRPLDLLRKWHEKIETWIL 452 L R+ + ++ Sbjct: 382 AEYLPERRRMMQAWADYLD 400 >UniRef50_B4RZR6 Prophage CP4-like integrase n=2 Tax=Proteobacteria RepID=B4RZR6_ALTMD Length = 412 Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats. Identities = 61/440 (13%), Positives = 136/440 (30%), Gaps = 58/440 (13%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTIGNI 89 T ++++ +W D L +G+K + + + GK + IG Sbjct: 1 MPLTDIQIKQAQASTKD----IWLTDEKGLRLLVKKNGSKYWRLKYRFQGKQKTLAIGVY 56 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 + + DAR + + IDP K K + + E F+ + + Sbjct: 57 PEVSLKDAREAVSEARRQLRDDIDPSAIKQEKKHLSSVSEIE------LFNTQARLWWNK 110 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 + S TR + L +L P+ E+TP I Sbjct: 111 QKGQWSEGHAARIWTRLNDN----------------------ALKTLGKRPIGEITPQDI 148 Query: 210 AAWLSTERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 + V + +R +++ +L+ ++ + Sbjct: 149 IRTVQKIETRGALDVAQRVLQDIRRVCRFAVQTGVLLHNPASELS------GILEKRKTS 202 Query: 269 ADDCLQKEQLKSWFSAVRSLNNP---IASAYLQVLLLTGARREEIASLRWSDVDFKWSSM 325 L +E+L + + + + + +++L+ T R E+A RW + D + Sbjct: 203 HRASLPREELPQFLRDLDAYHQQGRLLTKLAIELLVHTFVRPGELAGARWDEFDLEEKLW 262 Query: 326 RIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHN 382 RI K++ + I+PL+ +L + +VF S K + + Sbjct: 263 RIPAHRMKMKSDHIVPLSRQALAVLEN----TKPFSARFEFVFPSERDRFKQMSDNTMRM 318 Query: 383 RALVLA------ELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRR- 435 + + HG R + ++ + + + H Y Sbjct: 319 AIFRMGYDGETKGKSKANPHGFRATASSILNETGFNPDAIERQLSHMERNGVRAAYTHHA 378 Query: 436 -PLDLLRKWHEKIETWILNE 454 L+ ++ + ++ + Sbjct: 379 RYLEERKEMMQWWSDYLDSL 398 >UniRef50_A5I9N5 Integrase, phage related n=12 Tax=Legionella RepID=A5I9N5_LEGPC Length = 407 Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats. Identities = 71/434 (16%), Positives = 145/434 (33%), Gaps = 58/434 (13%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNI 89 + FT +R +K+ + + R + K ++++ G T + T+G+ Sbjct: 2 KNFTDTYIRNLKA--KEKRYEEF--EGGGFGIRITPNNVKTWIYRYKINGVTTKFTLGHY 57 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 + +A+ L + G+DP+ +QA+ + T ++ Sbjct: 58 PAMSLSNAKRRFLELSQMRREGVDPKTV----------IQAQEEQDNNTVDKLALNW--- 104 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 T YI H+ + + L L ++ I Sbjct: 105 -------------YTNYIEKHVKR-------PLVIKRQIDNDIIPLLGKKKLDDVQTKDI 144 Query: 210 AAWLSTERQNRPTV-TAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 + L T + + ++ ++ + Q + A + R + Sbjct: 145 SDALDTIVKRGARILANRTLSSIKQMFNYAVSRGYTQ----FNPASNIRSRDI-GGIEKP 199 Query: 269 ADDCLQKEQLKSWFSAVRSLNNPI---ASAYLQVLLLTGARREEIASLRWSDVDFKWSSM 325 + L E++K+ + + S + +++LLLTG R E+ W ++DF+ S Sbjct: 200 KERVLTLEEIKALWLFLDSDLTQMSTQTRIAIKLLLLTGVRTVELRLASWHEIDFEASLW 259 Query: 326 RIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPR--SA 380 I K + L+ L L ++ +V I E A Sbjct: 260 TIPALHSKASIIHKVHLSKLAKSLFLQLK-----PLSHSDYVLTGVDGFHPITENALPRA 314 Query: 381 HNRALVLAELPHISLHGLRRSFGTLAEW-VEVPTGIVAQIMGHKPSALAEKHYRRRPLDL 439 R +P + H LRR+F T +++ ++ + +GHK + + R L Sbjct: 315 IKRIQEKLGIPDWTAHDLRRTFATQLGETLQIDPVVIEKCLGHKMPRIMATYNRNEMLPQ 374 Query: 440 LRKWHEKIETWILN 453 R+ E+ I N Sbjct: 375 RREALERWAVCIEN 388 >UniRef50_B5KC37 Putative phage-related integrase n=1 Tax=Octadecabacter antarcticus 238 RepID=B5KC37_9RHOB Length = 385 Score = 281 bits (720), Expect = 3e-74, Method: Composition-based stats. Identities = 72/440 (16%), Positives = 148/440 (33%), Gaps = 67/440 (15%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRM 84 L++Q T +R+ K+ L+DA V L R TSG K++ + G+ LR Sbjct: 2 PKLAQQPLTELAIRKAK--PADKRYDLFDASVRGLGLRVATSGTKSWFMMRRFNGRMLRT 59 Query: 85 TIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWE 144 T G D + +AR +A + + G+ + ++ F V + Sbjct: 60 TFGRYPDLTLANARLKAPNVLADMSDGL-----------------TQGQRKTDLFKVVLD 102 Query: 145 DYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSEL 204 ++L++ + + + + L + +P++ + Sbjct: 103 EWLKKDQAKNKSVH------------------------QVRVAMYKHALPAFGPMPVASI 138 Query: 205 TPDYIAAWLSTERQ-NRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVP 263 T + + P + F W + + P Sbjct: 139 TKRDVNRLIDKIVDAGSPVAANRVLAFTKRFFSWCKERDILE--------LSPAEAIRPP 190 Query: 264 VSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWS 323 D L E++K +++A + P Q+LLLTGAR E++ W +V Sbjct: 191 SKEKTRDRVLTLEEIKGFWAACDQMGYPW-GPIFQLLLLTGARLREVSQASWGEVSIADG 249 Query: 324 SMRIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSA 380 ++ + K I L+ ++ L + + +F + + + + Sbjct: 250 TLNLPARRTKNGRAHQIQLSDQAINIIQALPKVE-----GQDLIF-TTNGTTAVSGFSKV 303 Query: 381 HNRALVLAELPHISLHGLRRSFGTLAEW-VEVPTGIVAQIMGHKPSAL--AEKHYRR-RP 436 R +++ + H LRRSF T + + + + +I+ H + Y+ Sbjct: 304 KKRLDIISGVADWRFHDLRRSFATHSTERLGISPVVADKILNHVTGQVRGVAAIYQHGEY 363 Query: 437 LDLLRKWHEKIETWILNEAG 456 L+ R +K +I Sbjct: 364 LEERRASLQKWGNFIQGLIA 383 >UniRef50_A4JAY4 Phage integrase family protein n=22 Tax=Bacteria RepID=A4JAY4_BURVG Length = 405 Score = 281 bits (719), Expect = 4e-74, Method: Composition-based stats. Identities = 61/435 (14%), Positives = 137/435 (31%), Gaps = 46/435 (10%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIG 87 + + T + R E L+D L R +SG+K + + + GK +T G Sbjct: 1 MKTKPLTDAKCRNARFDEAGGN-KLFDGGGLYLDLR-SSGSKKWRLKYRFNGKENLLTFG 58 Query: 88 NINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYL 147 + + DAR+ + L+ G +P + V+ Q + + TF ++ Sbjct: 59 DYPATSLADARSRRDEAKRLLAEGKNPAFERDVEK------QTRAIAAQNTFEAVALEWY 112 Query: 148 QELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPD 207 + + SA R + + P+S + Sbjct: 113 EAQQATWSASH----------------------ANRVKKQLDREVFPLIGQRPISSIGAP 150 Query: 208 YIAAWLSTERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSA 266 + A + + +++ + + ++R + Sbjct: 151 DLLAVVRRIEGREAFETARKTLQTCGQVFRYAVATSRAERD------PSPDLRGALKAVP 204 Query: 267 SKADDCLQKEQLKSWFSAVRSLNN-PIASAYLQVLLLTGARREEIASLRWSDVDFKWSSM 325 K + + +L ++ S P L+ L LT R E+ W+++D + Sbjct: 205 VKHMARVGESELPELLRSIASYEGEPETRLALRFLALTFVRTIELRQAEWTEIDLERREW 264 Query: 326 RIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHN 382 RI K+ I+PL LL+ L W+F ++ + + + + Sbjct: 265 RIPAEKMKMRRVHIVPLAEQAIALLSELRAL----TGHRRWLFPNSRRPLQQMSENTILY 320 Query: 383 RALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPS-ALAEKHYRRRPLDLLR 441 + ++ HG R T+ + + + + H + + L Sbjct: 321 ALYRMGYRSRMTGHGFRGLASTILNEKGFNSDWIERQLAHSEQDGVRAAYNHAEYLSERH 380 Query: 442 KWHEKIETWILNEAG 456 + + ++ ++G Sbjct: 381 RMMQWWADYLDKQSG 395 >UniRef50_Q12DC0 Phage integrase n=1 Tax=Polaromonas sp. JS666 RepID=Q12DC0_POLSJ Length = 440 Score = 281 bits (719), Expect = 4e-74, Method: Composition-based stats. Identities = 167/444 (37%), Positives = 244/444 (54%), Gaps = 22/444 (4%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAK-AFVFQSVYAGKTLRMTI 86 ++R FT R+ F P K Q FLWDA L R T+ K ++VFQ Y KT+R+TI Sbjct: 1 MARIAFTAGRVAGFKCPPEKSQVFLWDAATPGLGLRTTAAGKPSYVFQGRYQEKTIRVTI 60 Query: 87 GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRK-------TKVTF 139 G+ + W I A+ +AR LQ LID G DPR K +A +A + +T Sbjct: 61 GSPDAWSIPQAQEKARALQRLIDEGRDPRDLKRDAVAAGAERKAAAAAKVQADKVASLTV 120 Query: 140 SVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNL 199 W+ YLQE + K + + Y AD +++ GG KKRGQG T GP+ LL L Sbjct: 121 GEVWQTYLQEGK----PKRRDAWKPGYRADLELMATPGGVKKKRGQGLTRQGPIYPLLAL 176 Query: 200 PLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVR 259 ++E+ D + AW E A A+ + + F++W + + Y+ +I D + + Sbjct: 177 QMTEVNEDALKAWFDRESLAGKHQAARAFMMFKGFLRWCSARPAYRSLIDRDAGKAAAIV 236 Query: 260 KMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVD 319 + +P + + D L K Q++ W++ V L+N AS YL+ LLLTGARREE+A+L+W DVD Sbjct: 237 ENLPQATHRTDKLL-KGQVQGWWTGVEQLSNRTASVYLRALLLTGARREEVAALKWGDVD 295 Query: 320 FKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRS 379 F+W + + DK++ R IPL+PY++ +L L + +VF S SKSG I++ R Sbjct: 296 FQWRKLTLADKVDATRTIPLSPYMAHMLAGLPRV-------GAFVFASASKSGHIVDARD 348 Query: 380 AHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDL 439 + +A+ AE+ H++ HGLRR+F T VP GIVAQI GHK SA AE + R LD Sbjct: 349 SMQKAVTEAEVGHLTFHGLRRTF-TQTGRGVVPAGIVAQIQGHKSSATAEGYDIR-TLDE 406 Query: 440 LRKWHEKIETWILNEAGITIKNNV 463 L + E+IE IL+ AG+ Sbjct: 407 LSPYLEQIERHILSLAGVQFDAGA 430 >UniRef50_B7I7W7 Integrase n=4 Tax=Pseudomonadales RepID=B7I7W7_ACIB5 Length = 427 Score = 280 bits (718), Expect = 6e-74, Method: Composition-based stats. Identities = 74/450 (16%), Positives = 134/450 (29%), Gaps = 49/450 (10%) Query: 13 HYCKTAILNWSRKMALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAF 71 H+ + A + ++ + R+ + L K+ D + L R G KA+ Sbjct: 9 HFVELAGVQAMKRTEIKRRPLSDTVLANLE--PESKEYRELDGE--GLYFRVKPDGKKAW 64 Query: 72 VFQSVY-AGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQA 130 +F+ GK + IG + AR +AR + I G +P I K + + Sbjct: 65 LFRYKKADGKWSWLGIGTYPELSGAGARKKAREIIKDISQGDNPIITKQERK------RQ 118 Query: 131 ESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSA 190 E + TF V ++L T R +G Sbjct: 119 ELEQNNATFEVLAREWLDTKANTWVKDTM----------------------TRNKGALEK 156 Query: 191 GPLASLLNLPLSELTPDYIAAWLSTE--RQNRPTVTAHAYRLLRAFIKWSNYQKKYQGII 248 A + + P L Q + R ++ K G I Sbjct: 157 HIFAIFGKRLYTSIKPIEWMNHLKGIQQHQGIYEQVNRVRAMCRDIYDFA----KVTGRI 212 Query: 249 PGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARRE 308 + + V + + + +++L + A+ S LQ+L + R Sbjct: 213 DYNPLEGLQKFLQQGVKQNMSH--VSEQELPALLRAINSYPTMDVRMGLQLLAMLFCRPT 270 Query: 309 EIASLRWSDVDFKWSSMRIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVF 365 E+ +W + D I K E ++PL +LN L ++F Sbjct: 271 ELREAKWQEFDLNQGIWNIPAERMKKRREHVVPLPRQAITILNELKTYE----TNSEYLF 326 Query: 366 RSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPS 425 S S K + + HG R TL + + H Sbjct: 327 PSRSDKSKPKSDTVFIMALRRMGYEGRQTPHGFRHIASTLLNNRGFDERHIEAALAHVKD 386 Query: 426 ALAEKHYRRRPLDLLRKWHEKIETWILNEA 455 +A + + + LD + + + A Sbjct: 387 GVAGVYNKAQYLDDRKIMLQWYANHLEEIA 416 >UniRef50_D2LJU9 Integrase family protein n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LJU9_RHOVA Length = 393 Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats. Identities = 84/436 (19%), Positives = 158/436 (36%), Gaps = 59/436 (13%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTI 86 ++ K T ++ + + LWD V A +A +G+ +FV ++ G+ +TI Sbjct: 1 MAGIKITLTGVQALSP-----GSTLWDGQVKGFAAKANANGSVSFVLKTRVNGRQRWVTI 55 Query: 87 GNIND-WKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWED 145 G W ++ AR EA RL +G D K K A + F + Sbjct: 56 GKFGSPWTVETARREALRLLGEAASGNDIGAEKQAKRA-----------KGLLFGHVADQ 104 Query: 146 YLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 ++ + +T+ Y + P++++ Sbjct: 105 FIAIHFPKLKPRTRESY----------------------GTIIRLHLKPAFGATPIADIR 142 Query: 206 PDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVS 265 +A + + P HA +L + W+ Q A+ R + Sbjct: 143 KTSVATFHAR-HAETPRNANHALSVLSKIMNWAEEQGLR-------PAESNPCRNIRKYR 194 Query: 266 ASKADDCLQKEQLKSWFSAV-----RSLNNPIASAYLQVLLLTGARREEIASLRWSDVDF 320 +K + L ++L +A+ +P A +++LLLTGAR EI +LRW+ VD Sbjct: 195 ETKRERYLSPDELARLGAALAAAEDDKTVDPYIIAAIRLLLLTGARLSEILTLRWTYVDT 254 Query: 321 KWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSA 380 + + D G ++IPL +LL L + N +V + ++ + Sbjct: 255 YRRILNLPDSKTGAKVIPLNQAALDLLGTLPRL-----NSNPFVLVGRVEGQHLVNLQKP 309 Query: 381 HNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLL 440 R A L + +H LR SF +++ + ++ +++GH A + Y + Sbjct: 310 WRRIRKEAGLDDVRIHDLRHSFASVSVGLGGSLPVIGRVLGHSQPATTAR-YAHVADKVA 368 Query: 441 RKWHEKIETWILNEAG 456 + E I Sbjct: 369 AELVEAAGALIGTALQ 384 >UniRef50_C0GR55 Integrase family protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GR55_9DELT Length = 401 Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats. Identities = 67/433 (15%), Positives = 141/433 (32%), Gaps = 55/433 (12%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAGKTLRMTIGNI 89 T +++ G + + D D + T G K + F+ + GK + +G Sbjct: 1 MSLTDVQVKGLK--PGSTKYRVKDKD--GMYLEVTPAGGKLWRFKYRFNGKNKLLALGKY 56 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 D + AR + + I G DP K ++ AE E TF +++ + Sbjct: 57 PDVSLAKAREKLSIARQQIAEGKDPAYIKKIEKAEKE----------NTFKAITDEWWRA 106 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 ++ + R D L L + P+ E+T I Sbjct: 107 KKSTWTPGHAEKVYRRLEID----------------------VLPYLKDRPIKEITAREI 144 Query: 210 AAWLSTERQNRPT-VTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 L T ++ ++ + + D+++ + Sbjct: 145 LEVLKKAEARGVTDTAYRLAQMCSNIFIFALASGRAEHNPAADISKALTAH-----PKTN 199 Query: 269 ADDCLQKEQLKSWFSAVRSLNNPIASA-YLQVLLLTGARREEIASLRWSDVDFKWSSMRI 327 + +++K A+ L++ +L R E+ W++++F + + Sbjct: 200 RPAITEPDEIKELLLAIDGFTGSYTVLCALKIAILVFVRPGELRQASWAEINFDEALWYV 259 Query: 328 K---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRA 384 K++ E ++PL+ ++L + + +VF S + + + + N A Sbjct: 260 PSQRMKMKREHLVPLSGQAVKILKDI----HPLTGAGHYVFPSIRTNSRPMSENT-LNAA 314 Query: 385 LVLAELP--HISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRR-PLDLLR 441 L P + HG R T + P+ I+ + H Y R LD Sbjct: 315 LRRLGYPQEKLCAHGFRTMASTRLHEMGWPSDIIEFQLAHVDQNKIRGIYNRAEYLDQRT 374 Query: 442 KWHEKIETWILNE 454 K + ++ + Sbjct: 375 KMMQAWADYLDDL 387 >UniRef50_B3CTI8 Putative integrase n=7 Tax=Orientia tsutsugamushi str. Ikeda RepID=B3CTI8_ORITI Length = 379 Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats. Identities = 77/428 (17%), Positives = 148/428 (34%), Gaps = 60/428 (14%) Query: 33 FTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNIND 91 FT + + P +K+ D L G K G ++ +GN + Sbjct: 7 FTQIAISKIK-PPKEKRDVYRDTKDKGLFLEVLYGGTKTLYLGITIKGVYRKIKLGNFPN 65 Query: 92 WKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELR 151 ++ AR + L+ I GIDP K T ++ Y+ + Sbjct: 66 ISVNYARKKTLILKGQIAKGIDPL----------------KTKNASTLKEVYDLYINHRK 109 Query: 152 TGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAA 211 S+K L +L + +S + + I Sbjct: 110 LKDSSK-------------------------ILYKGIMNKYLKNLHYIHVSNIRKEDIYK 144 Query: 212 WLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADD 271 + ++ +L++A + + + +I + A + KM D Sbjct: 145 IFNNAKKGGKYSANKTLKLIKAILNIAVELE----LIEKNPANGIKIHKM-----QARDR 195 Query: 272 CLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKI 331 + E++ + +AV NP ++ + L T ARR + S+RW ++ + I + Sbjct: 196 YITLEEMPRFLAAVEEDKNPYLKYFVYISLYTAARRNNVLSMRWENIRLEEGVWYIPETK 255 Query: 332 EGE-RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRS-NSKSGKIIEPRSAHNRALVLAE 389 GE + +PL + E L S ++ WVF SG + A R A Sbjct: 256 NGESQTVPLINLLIEKLKQY-----SYSSESEWVFPGQRRNSGHLTSINVAWKRVCKRAG 310 Query: 390 LPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIET 449 L ++ +H LRR+ G+ +P ++++++ H K Y +++R +K Sbjct: 311 LKNLRIHDLRRTVGSWMAKFGMPIAVISKLLNHNDHQST-KFYIHLNTNVVRDAIQKFAN 369 Query: 450 WILNEAGI 457 I + Sbjct: 370 EIAKCTNL 377 >UniRef50_Q3SF40 Putative phage integrase n=5 Tax=Proteobacteria RepID=Q3SF40_THIDA Length = 440 Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats. Identities = 56/435 (12%), Positives = 143/435 (32%), Gaps = 23/435 (5%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVY-AGKTLRMTIGN 88 + +LR + ++D L +G + + + GK + +G+ Sbjct: 1 MALSDSKLRTLKPADR----VFSESDGGGLYIEIMPTGKRRWGLKYRIPTGKQETIRLGD 56 Query: 89 INDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQ 148 + + DAR + L G+ P K ++ A + ++ Sbjct: 57 YPAYSLADARTWRDDCKALAGRGLSPMALKRGDPIPEDAAPAAKELAQFFIRNWCMKAVE 116 Query: 149 ELRTGISAKTKRPYSTRY-IADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPD 207 + + + + + + + + + + ++ + ++++T Sbjct: 117 KAKAKEAEAKAADTVEAFAWRWYAEIVEPANSNPRNIKRILDKDAIPAIGSKQIADVTVT 176 Query: 208 YIAAWLSTERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSA 266 I A + + +L+ ++ ++K + A + + A Sbjct: 177 DILAITDKIKNRGADQMALQTRNVLKRLFAYAIAREKT----TFNPAAAIEAKFI--AQA 230 Query: 267 SKADDCLQKEQLKSWFSAV-RSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSM 325 D L E++ A+ +S L +L+L R+ E+ +W ++D + + Sbjct: 231 KSRDVALSPEEIGRLLRAIYQSSMKRAHKLALHLLILCMVRKSELTEAKWEELDLEKAEW 290 Query: 326 RIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHN 382 I K + ++PL+ + L + WVF S S K I + + Sbjct: 291 AIPGERMKKDKPHLVPLSRQAVAMFEELKGLA----SGSEWVFPSRSSLKKPIAHNALNT 346 Query: 383 RALV-LAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLR 441 A++ +H RR+ T + + + + H+ + + R + D R Sbjct: 347 VVRALEADVRDFVIHDFRRTASTHLHEAGFNSDWIEKALAHETKGIRGVYNRAQYADQRR 406 Query: 442 KWHEKIETWILNEAG 456 + ++ ++ Sbjct: 407 DMLQWWADFVDSQIQ 421 >UniRef50_Q2T016 Site-specific recombinase, phage integrase family n=30 Tax=Bacteria RepID=Q2T016_BURTA Length = 438 Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats. Identities = 62/442 (14%), Positives = 135/442 (30%), Gaps = 49/442 (11%) Query: 22 WSRKMALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGK 80 RKM T ++RR ++ L D L + +G++ + + + GK Sbjct: 37 PQRKMPKQTDPLTDLKVRRAK--PAEQPYRLADG--KGLYLQVMPNGSRYWRMKYRFDGK 92 Query: 81 TLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFS 140 + G + + AR + L+ G DP K E +A + + +F Sbjct: 93 EKLASFGVYPEVSLAQARQACLAARKLLAAGTDPTEQKR------EIKRARAIEASSSFE 146 Query: 141 VAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLP 200 ++ + + G + + + + P Sbjct: 147 AVAREWFESQKDGWTE----------------------VYANKVINSLEVDAFPRIGSKP 184 Query: 201 LSELTPDYIAAWLSTERQNR-PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVR 259 L ++ + + + RA ++ + + A D + Sbjct: 185 LRDIEAPDMLEIVRAIEARGVRETAKRVLQRSRAVFQYGIMTGRCS----RNPAADIDAE 240 Query: 260 KMVPV-SASKADDCLQKEQLKSWFSAVRSL-NNPIASAYLQVLLLTGARREEIASLRWSD 317 ++ K ++ ++ + + + + L+ + LT R E+ + W + Sbjct: 241 TVLKKGQGVKHMARVKPVEIPQLMRDIAAYSGDRVTQLALRFMALTFTRTTEMINAEWDE 300 Query: 318 VDFKWSSMRIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKI 374 D + + RI K+ I+PL+ E+L L + + VF S I Sbjct: 301 FDERAAEWRIPPDRMKMRDPHIVPLSRQALEVLAALREL----NGNQRLVFYSVQGRSHI 356 Query: 375 IEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRR 434 + + ++ HG R T+ + +V + + H Y Sbjct: 357 SN-NTMLYALYRMGYKSRMTGHGFRGLAATVLRELGYSRDVVDRQLAHAERNQVTAAYVH 415 Query: 435 R-PLDLLRKWHEKIETWILNEA 455 L RK + ++ A Sbjct: 416 AEYLPERRKMMQHWADYLTQTA 437 >UniRef50_A4SSF4 Phage integrase n=3 Tax=Proteobacteria RepID=A4SSF4_AERS4 Length = 404 Score = 279 bits (713), Expect = 2e-73, Method: Composition-based stats. Identities = 72/432 (16%), Positives = 138/432 (31%), Gaps = 46/432 (10%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIGNIN 90 T R+ L D L K + + + GK ++ +G Sbjct: 1 MPLTDITARQAKWSGKPNGDKLADE--KGLFLLVNKSGKYWKLKYRHGGKEKKLALGVYP 58 Query: 91 DWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQEL 150 + + +ARA+ + +I GIDP + + + + + V ++ Q Sbjct: 59 EVSLREARAKRDEARRVIAEGIDPGLVRKQSKVASRLVSEN------SLEVLAREWHQSQ 112 Query: 151 RTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIA 210 S R L +P++ELT I Sbjct: 113 FALWSPGH----------------------ATRVIESLEVDVFPDLGLVPITELTAPMIL 150 Query: 211 AWLSTERQNRPT-VTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKA 269 L + T + + A ++++ + + AQD R + + + Sbjct: 151 EALRKVEKRGATETAGRILQRVSAIMRYAIQTGRAS----YNPAQDL--RGALKATKQEH 204 Query: 270 DDCLQKEQLKSWFSAVRSLN-NPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIK 328 L + +L +F + + NP L +L+LT R E+ RW + D + + RI Sbjct: 205 RPALPRSELPEFFRRLEAEPLNPATRLALHLLMLTMTRPGEVRFARWDEFDMERAEWRIP 264 Query: 329 ---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRAL 385 K+ E ++PL+ +L+ L Q +F S K + + Sbjct: 265 AARMKMRTEHLVPLSRQALAVLDELHQL----TGHCELLFPSERKLTNPMSENTLSYAMG 320 Query: 386 VLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRR-PLDLLRKWH 444 + + HG R T ++ + + H Y R LD RK Sbjct: 321 RMGYKGIATPHGFRALASTTLNEEGFDPDVIERQLAHAERNKVRAAYHRAEYLDDRRKLL 380 Query: 445 EKIETWILNEAG 456 + + + ++ G Sbjct: 381 QWLADFYDSQRG 392 >UniRef50_Q5P090 Integrase n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P090_AZOSE Length = 402 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 69/431 (16%), Positives = 140/431 (32%), Gaps = 49/431 (11%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAGKTLRMTIGNI 89 + T + +R G K + D L T G K + ++ AGK IG Sbjct: 1 MQLTDKAIRGVK--GGAKPVKMADGG--GLYLEVTPAGGKLWRYRFRLAGKENVFAIGAY 56 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 + DAR + L+ G +P + + QA + TF+ +++ Q Sbjct: 57 PRVSLADARKARDEARDLVKQGFNPSHYRQQ------AKQAVIDENLNTFAPVADEWYQS 110 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 S H+ L + LP+ +T + Sbjct: 111 KVDSWSKGH---------RHHVRTI-------------LDKDILPRIGKLPIRSITSPLL 148 Query: 210 AAWLSTERQNRPTV-TAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 + T A +++ + + + + A+ +++ + ++ Sbjct: 149 HDVMKKIVARGATTRAILARQIMGSVFNLAILTHRADT----NPAE--PLKRQIARCVTE 202 Query: 269 ADDCLQKEQLKSWFSAVRSL-NNPIASAYLQVLLLTGARREEIASLRWSDVDFK---WSS 324 L++ + + + + LQ+L+LT R E+ RW++ D W+ Sbjct: 203 HHRHLEERDVGDFLRKLSDYTGHATTRIALQLLMLTAVRPGEVCGARWAEFDIDGQNWTI 262 Query: 325 MRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRA 384 + + K I+PL+ +LL L ++F S + + +S N Sbjct: 263 PKERMKTRKPHIVPLSNQAVDLLKEL----EPITGDTAFLFPSQGTKTQTMPTQSIRNAV 318 Query: 385 LVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRR-RPLDLLRKW 443 + L S HG R +F T+ + + + + H Y + L RK Sbjct: 319 VKLGYADKFSPHGARGTFSTMLNGRGYNSDWIERQLAHDEGNRVRASYNHMQYLPERRKM 378 Query: 444 HEKIETWILNE 454 ++ + Sbjct: 379 LQEWADLLDEL 389 >UniRef50_B2UB26 Integrase family protein n=2 Tax=Ralstonia RepID=B2UB26_RALPJ Length = 415 Score = 278 bits (712), Expect = 3e-73, Method: Composition-based stats. Identities = 70/439 (15%), Positives = 152/439 (34%), Gaps = 45/439 (10%) Query: 32 KFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNIN 90 K T R+ ++ L D L G+KA+ +Q + +GK + IG+ Sbjct: 7 KLTPTRINNAK--PKEQPYKLTDGG--GLFVLVHPGGSKAWRYQYMLSGKRRSVLIGSYP 62 Query: 91 DWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQEL 150 + + DAR + +++ G DP + AE ++ ++ + F ++ E Sbjct: 63 EIGVSDARDRHAEYRAMVEQGTDPAEHRRQDKAERKAKESLQEDEGL-FKAFSLKWIDER 121 Query: 151 RTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIA 210 + + +R + L ++ P ++ Sbjct: 122 LATKTEGYRSQIKSRL----------------------ERFVWPVIGRKALEDVKPSHLL 159 Query: 211 AWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKAD 270 + R P +++ ++ + ++ + A VP + Sbjct: 160 EIIEARRAT-PNTAEGVRVIIQQIYNYAIQ----KLLVESNPAVPLRGVITVPKAE--HH 212 Query: 271 DCLQKEQLKSWFSAV-RSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFK---WSSMR 326 L + +L +++ A+ R +P +A ++L+ + R+ E+ +W++ D W Sbjct: 213 RHLSESELGAFWRALGRQGAHPATTAAARLLVYSMCRKSEVLRAKWAEFDLDKAQWDIPA 272 Query: 327 IKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALV 386 + K + L+ ELL ++ +V S + + + ++ Sbjct: 273 ERMKSRRPHRVYLSRQAIELLEIMRAI----SGDGVYVLPSVKIASVPLAEATLNHLFKR 328 Query: 387 LA-ELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLD-LLRKWH 444 L +P S HG R + TL +V ++ H + Y L+ RK Sbjct: 329 LDFGVPEFSPHGTRGTAATLLREHGFSRDVVELLLAHTERSQTAASYHHHELEAERRKAL 388 Query: 445 EKIETWILNEAGITIKNNV 463 + + I +A I+ NV Sbjct: 389 QYLADEIDRQAAISAAGNV 407 >UniRef50_Q3JXH9 Integrase or site-specific recombinase n=24 Tax=cellular organisms RepID=Q3JXH9_BURP1 Length = 414 Score = 277 bits (708), Expect = 7e-73, Method: Composition-based stats. Identities = 76/439 (17%), Positives = 153/439 (34%), Gaps = 54/439 (12%) Query: 27 ALSRQ--KFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTL- 82 A+ + R++ + + D L TSG+K + ++ GK Sbjct: 5 AMPKISTPLNDTRIKALK--PKAARYTVSDGG--GLVLEVMTSGSKFWRYRYSLHGKQQP 60 Query: 83 RMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVA 142 +TIG + AR ARR ++ G+ P +SL T Sbjct: 61 VVTIGEYPAVSLTAARERARRYAEIVAGGVSPVADARKDRGAVKSLD--------TIHEF 112 Query: 143 WEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLS 202 E ++++ G SA+ R D ++ +S Sbjct: 113 AEYWIEQQMMGKSAEYLRTTRRALEKD----------------------IYPAIGGKSVS 150 Query: 203 ELTPDYIAAWLSTERQNR-PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKM 261 ++TP + A ++ P + +L+ +++ ++ ++ + AQ R + Sbjct: 151 DVTPGDVLAICDRIKKRGAPKMALSTRNILKRIYEYAIARQ----LVTSNPAQAIVARFV 206 Query: 262 VPVSASKADDCLQKEQLKSWFSAVRSLNNPI-ASAYLQVLLLTGARREEIASLRWSDVDF 320 + + D L ++ AV + + + +L+LT R+ E+ RW + D Sbjct: 207 --ATQASRDRVLSPNEIGRVLRAVYASSIRRPLKLAIHLLVLTMVRKSELIEARWDEFDL 264 Query: 321 KWSSMRIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEP 377 S RI K + E + L P +L L + S +VF S+ + + I Sbjct: 265 DASIWRIPAERMKKDREHWVYLAPQAVAMLRELHATRTS----HQYVFPSSRGADRPIAK 320 Query: 378 RSAHNRALVL-AELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRP 436 + + L ++ H LH RR+ T + P+ + + + H + + R Sbjct: 321 STLNQAVRALDMDVQHFVLHDFRRTASTHLHEMGQPSDAIEKALAHSIKGIKGVYNRAEY 380 Query: 437 LDLLRKWHEKIETWILNEA 455 D R+ ++ + Sbjct: 381 ADERRRITALWADFVDAQI 399 >UniRef50_P37317 Integrase n=42 Tax=root RepID=VINT_BPSFV Length = 385 Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats. Identities = 75/431 (17%), Positives = 142/431 (32%), Gaps = 56/431 (12%) Query: 33 FTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTIGNIND 91 T +++ +K L D + L SG K + + GK +T+G Sbjct: 2 LTVKQIEAAK--PKEKPYRLLDGN--GLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPL 57 Query: 92 WKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELR 151 + +AR +A + I GIDP AK + +FS ++++ + Sbjct: 58 MTLQEARDKAWTARKDISVGIDPVKAKK------------ASSNNNSFSAIYKEWYDHKK 105 Query: 152 TGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAA 211 S + + D L + L + ++ P + Sbjct: 106 QVWSVGYATELAKMFDDD----------------------ILPIIGGLEIQDIEPMQLLE 143 Query: 212 WLSTERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKAD 270 + A R +++ + + DLA + Sbjct: 144 VIRRFEDRGAMERANKARRRCGEVFRYAIVTGRAKYNPAPDLADAMKGYRKKNFP----- 198 Query: 271 DCLQKEQLKSWFSAVRSLNNPIASA-YLQVLLLTGARREEIASLRWSDVDFKWSSMRIK- 328 L +Q+ ++ A+ + + I S +VL T R +E+ S++W +VDF+ + I Sbjct: 199 -FLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRTKELRSMQWKNVDFENRIITIDA 257 Query: 329 --DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALV 386 K ++P++ V ELL L+ +VF + K I + + Sbjct: 258 SVMKGRKIHVVPMSDQVIELLTTLSSITKPV---SEFVFAGRNDKKKPICENAVL-LVIK 313 Query: 387 LAELPHI-SLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRR-RPLDLLRKWH 444 + S HG R F T+ E P + + H Y + LD R+ Sbjct: 314 QIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGSVRGIYNHAQYLDKRREMM 373 Query: 445 EKIETWILNEA 455 + W+ + Sbjct: 374 QWWADWLDEKV 384 >UniRef50_C3MAV8 DNA integration/recombination/invertion protein n=1 Tax=Rhizobium sp. NGR234 RepID=C3MAV8_RHISN Length = 429 Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats. Identities = 78/460 (16%), Positives = 150/460 (32%), Gaps = 70/460 (15%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNI 89 + T + + G + + D + L T+G K++ + +AGK +MT+G Sbjct: 5 KPLTVKSIEAIKA--GSSRREIPDGALQGLYLIVQTTGVKSWAVRYRHAGKPRKMTLGGF 62 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 + DAR EAR+ ++ G DP KA + + ++++ Sbjct: 63 PAISLSDAREEARKALRMVSEGRDPATEKAEQEPKRP-------AHMDLMPALLDEFVTR 115 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 + + S R + ++ + +T + Sbjct: 116 HVAVKNRPSYVRESKRIVEKNLK---------------------PKWKQKLVKTVTKRDV 154 Query: 210 AAWLSTERQNR-PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 L P + LL F W+ + V P Sbjct: 155 LKLLDEIVDRGSPIMANRVRALLSKFFAWAMERDIVDA--------SPVVSIKAPSEEKT 206 Query: 269 ADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFK--WSSMR 326 D L E+++ + A L P +++LLLT RR E++ W +++ + Sbjct: 207 RDRILTDEEIRFLWLAAEKLAYPF-GPVVKLLLLTAQRRTEVSDALWDELELEGNNQLWV 265 Query: 327 I---KDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEG--WVFRSNSKSGKIIEPRSA- 380 I + K + E +PLT E++ L + ++ K ++F + K+ + A Sbjct: 266 ISVDRAKNKKEHFVPLTASALEIIEGLPKIKPAEDEKAKPIYLFTTTGKT-PVSGFSKAK 324 Query: 381 -------HNRALVLAE----------LPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHK 423 A AE + + H LRR+ + + VP IV ++ H+ Sbjct: 325 TQLDGEMLAIARKEAEERGEDPEGISIEPWTYHDLRRTAASGMARLSVPVHIVEAVLNHR 384 Query: 424 PS---ALAEKHYRRRPLDLLRKWHEKIETWILNEAGITIK 460 +A + R + R +L G Sbjct: 385 SGSIKGVAAVYNRYDYAEEKRAALTAWADEVLRLVGRAAP 424 >UniRef50_A4TWM2 Phage integrase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TWM2_9PROT Length = 387 Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats. Identities = 76/416 (18%), Positives = 136/416 (32%), Gaps = 58/416 (13%) Query: 30 RQKFTFERLRRFTL-PEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSV-YAGKTLRMTI 86 + K T ++ P G+++ + D +VT +G F + AG++ + I Sbjct: 2 KAKITAALVKAPPPLPHGQRKLRITDTEVTGFVMEVWPTGGITFWCKYTDPAGRSREVKI 61 Query: 87 GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDY 146 G D ++ AR +A+ L+ + DP K + + TF + Sbjct: 62 GKAADISVEQARRKAKELRAQVALSGDPAGDK------------DKHRAVPTFKAFVTE- 108 Query: 147 LQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTP 206 ++ + S + + + L E+ Sbjct: 109 ----------------------QYLPFAKDRLRSYSDQESMCRLRLIPTWGAKRLDEIRT 146 Query: 207 DYIAAWLSTERQN--RPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPV 264 I R P+ L + + + Y+G P + Sbjct: 147 TDIVELQRRLRDENLSPSTVNRHVALAKRVFNLALRWQAYEGRNPCQHVEF--------A 198 Query: 265 SASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSS 324 + + L ++++ F A+ + A+ + +L LTGAR+ E + R+ D+D Sbjct: 199 REHQRERFLTPDEMRRLFQALDDEPSRSAANCIALLALTGARKSEALNARFDDIDLPNRV 258 Query: 325 MRIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAH 381 + K R IPL+ +LL L W+F + + G I R Sbjct: 259 WTVPASRSKSGKVRRIPLSEAAVKLLVGLP-----PEPDCPWLFPNAASDGPIENIRRCW 313 Query: 382 NRALVLAELP-HISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRP 436 NR A LP H LR SF +L V I+GH + + Y Sbjct: 314 NRLKAAATLPSDTRPHDLRHSFASLLVGSGQSLYSVQTILGHASPNMTAR-YSHLS 368 >UniRef50_Q129B4 Phage integrase n=1 Tax=Polaromonas sp. JS666 RepID=Q129B4_POLSJ Length = 387 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 96/429 (22%), Positives = 163/429 (37%), Gaps = 53/429 (12%) Query: 30 RQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAF-VFQSVYAGKTLRMTIG 87 + +FT R+ K+ D + L R +S G K + V G R+TIG Sbjct: 4 KFRFTKPRIEALPPALPGKRDEYRDEALPGLWLRVSSAGVKTYAVLARKKGGALERVTIG 63 Query: 88 NINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYL 147 + ++AR +A+++ + TG+ + + A +++ + TF+ DYL Sbjct: 64 TADKLTPENARDKAKKIIADLATGV------------SHAASARAKRGETTFAELLTDYL 111 Query: 148 QELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPD 207 + + A L LS+++ + Sbjct: 112 SNTTMKPRSLEAYQWL------------------------YKKHVEADLGKRKLSDVSVE 147 Query: 208 YIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSAS 267 I A ++ PT +++A W+ + Y G P + + Sbjct: 148 RIRALHKKISKDTPTTANRCVSMVKAAFNWALKEGTYTGANPAGHV--------KKNTET 199 Query: 268 KADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI 327 LQ +L +F A+ P A ++ + LLTGARR + ++RW+D+ + RI Sbjct: 200 SRTRYLQPAELAIFFQALEESEEP-AKSFFMLCLLTGARRANVLAMRWADISLEDGIWRI 258 Query: 328 K---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRA 384 K E IPL P LL L + WVF ++SK+G EP+ A Sbjct: 259 PAGDAKAGEEMNIPLVPEAVTLLTRLK---IEVADTSPWVFPADSKTGHYQEPKRAWATL 315 Query: 385 LVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWH 444 + L + +H LRR+ G+ T I A+ +GHK A + R +D +R Sbjct: 316 RRRSGLADLRIHDLRRTMGSWLVRTGANTAINAKALGHKSMQAAAVYQRIADVDPVRDAM 375 Query: 445 EKIETWILN 453 EK T + Sbjct: 376 EKATTAFMG 384 >UniRef50_A3UV17 Phage integrase n=1 Tax=Vibrio splendidus 12B01 RepID=A3UV17_VIBSP Length = 444 Score = 275 bits (703), Expect = 3e-72, Method: Composition-based stats. Identities = 73/452 (16%), Positives = 161/452 (35%), Gaps = 33/452 (7%) Query: 26 MALSR--QKFTFERLRRFTLPEGKKQTFLWD-ADVTTLACRATS-GAKAFVFQSVY---A 78 MA + + T + + T +G L D + L G K F ++ Sbjct: 1 MADKKNIKSITNKTIEALTAKKG----VLSDSGENRGLRIACGKTGRKTFTYRYRSPESG 56 Query: 79 GKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVT 138 GK +++ +G D ++ AR + R ++ + + GI P+ + E L R +T Sbjct: 57 GKLVQIKLGIFPDMSLEQARIKLREMKAIRERGICPKADLERQEQERRKLLKTERVNSIT 116 Query: 139 FSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLN 198 + YL+ + + +R + +K + +A L + Sbjct: 117 LKDVIDHYLENYIQDRLTSSGG----------VISGARKAKGQKEVRRTLYVDIVALLGD 166 Query: 199 LPLSELTPDYIAAWLSTERQNR-PTVTAHAYRLLRAFIKWSNYQKKYQGI--IPGDLAQD 255 + E+ I + P R L + +++ P LA + Sbjct: 167 RSVMEVGKSDITYLIQGIIDRGAPVQAGSVLRELSSAYEYAIGMDYLPENFVNPALLAIN 226 Query: 256 YNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLN-NPIASAYLQVLLLTGARREEIASLR 314 + V ++ +K L +L + + + + + L++ L TG R E+ L Sbjct: 227 KFKKSKVKLTNNKGKRVLDHSELSRFIKWLPNSSFSKNIRGILRMTLWTGCRTGEVCDLE 286 Query: 315 WSDVDFKWSSMRIKDKIEGE-RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGK 373 W +DF +++ + + G R + L + L + + + +VF ++ Sbjct: 287 WQQIDFDKNTIYLTETKNGNSRYVQLPSQAVQWLRKWKEVKS--YPQSIYVFSTSKGGSH 344 Query: 374 IIE---PRSAHNRALV--LAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALA 428 +++ + + ++P + H LRR+ T + PTG+ ++GH + Sbjct: 345 VVQKQLTQYTWRMRRDGLMIDMPLWTPHDLRRTVRTELARMGCPTGVAEAVLGHSVKGIE 404 Query: 429 EKHYRRRPLDLLRKWHEKIETWILNEAGITIK 460 + R R+W ++ + + + Sbjct: 405 GTYNLHRYEAECREWLQRWADELDSIVNVKTN 436 >UniRef50_D2YQV3 Phage integrase family protein n=2 Tax=Vibrio RepID=D2YQV3_VIBMI Length = 402 Score = 274 bits (702), Expect = 3e-72, Method: Composition-based stats. Identities = 77/448 (17%), Positives = 136/448 (30%), Gaps = 62/448 (13%) Query: 25 KMALSRQKFTFERLRRFTLPE---GKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGK 80 M + KF +L K+T D + L G K F+F+ G Sbjct: 6 AMQSRKFKFNKRQLDSLPPTPRSSKSKETEYTDELCSGLKMIVNRQGRKRFLFRYTLHGT 65 Query: 81 TLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFS 140 + +G I+ AR A + I G DP+ + + ++ +TF Sbjct: 66 KKSIQLGEYPALDINTARQIANDHKREIALGNDPKAIR------------DEKRNVLTFQ 113 Query: 141 VAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLP 200 E ++ + + K G + P Sbjct: 114 EFSE-----------------------LHYLPYAMMNKLTAKSDAGSLKLHFYSKWGKKP 150 Query: 201 LSELTPDYIAAWLSTERQ-NRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVR 259 L+++ I L + +P L+ + + + Sbjct: 151 LTDIGQQDIQKLLDGLLEGRKPATVNRLRSLVLRMFRLAMEWGYVDS--------NPGQY 202 Query: 260 KMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWS--- 316 + L + ++ S+ A N S L+ LLTG R EI S +W Sbjct: 203 IRKLKENNVRQRFLSRAEVSSFIKACNEEPNRTQSNALKFALLTGMRIGEITSSKWECLT 262 Query: 317 -DVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKII 375 D D WS K R + L E++N + K ++F ++ I Sbjct: 263 VDDDGNWSLFLPHTKSGLSRTVLLNHLAKEVINDQRRFQQ---LKNPYIFAGDAPGRPIA 319 Query: 376 EPRSAHNRALVLAELPH-ISLHGLRRSFGTLAEWVE-VPTGIVAQIMGHKPSALAEKHYR 433 P+ A R A + +H LR SF ++ V ++GH+ + + Y Sbjct: 320 HPKKAFARIKKAAGITDNFRIHDLRHSFASILINSGNATLYDVQHLLGHQSPQTSTR-YA 378 Query: 434 RRPLDLLRKWHEKIETWILNEAGITIKN 461 LR+ + + G K+ Sbjct: 379 HLASSRLRE----VSANVAELVGDVSKS 402 >UniRef50_Q5P855 Phage integrase n=5 Tax=Proteobacteria RepID=Q5P855_AZOSE Length = 432 Score = 274 bits (701), Expect = 5e-72, Method: Composition-based stats. Identities = 99/453 (21%), Positives = 166/453 (36%), Gaps = 54/453 (11%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAK-AFVFQSVYAGKTLRMTIGNI 89 K T + R LPEGK F WD +V R + K +++ Q G++ R+TIG Sbjct: 2 TKLTKTYIDRLALPEGKDGEFHWDTEVKGFGLRVSPTGKVSYLMQGRVHGRSARITIGPH 61 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 + +D AR AR + GIDPR K A AE+ VT + Y+ Sbjct: 62 GVFTVDQAREVAREHLRSMRMGIDPREVAKQKKATAEA----EAVAGVTLQEVCDAYV-- 115 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 + + I H+ + + + P++ +T D Sbjct: 116 ----SRPGKLKASTQIEIKRHVATT------------------FVAWKDKPIAAITEDDC 153 Query: 210 AAWLSTERQNR---------PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRK 260 P + +LRA I ++ Q K P L + K Sbjct: 154 RKRYREMLTKGLRGDRDGGSPGQANQGFSVLRALINYAARQYKKADGSPLILRNPASALK 213 Query: 261 MVPVSASKADDCLQKEQLKSWFSAVRSL-------NNPIASAYLQVLLLTGARREEIASL 313 V+ + + + ++ + ++A++ + + + LLLTGAR E A+L Sbjct: 214 DDWVALPERKTRIPESKIGAVWNALQQWRKVAYTRDTESSIDLVTFLLLTGARIGEAAAL 273 Query: 314 RWSDVDFKWSSMRIKDKIEGERI-IPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSG 372 W V+ + D + +PL+ +ELL + +VF S + Sbjct: 274 EWERVNLDEGWWHLPDPKNRNPVWLPLSTQAAELLKTRRRIK-----DNPFVFTSWGECK 328 Query: 373 KIIEPRSAHNRALVLAELPHISLHGLRRSFGTLA-EWVEVPTGIVAQIMGHKPSALAEKH 431 I +PR + +A I+ H LRR+F T V + + H P + +H Sbjct: 329 HISDPRDTMKKLSAVAG-TKITPHDLRRTFTTFGIAQCSVELHKIELLTNHVPKGVTARH 387 Query: 432 YRRRP-LDLLRKWHEKIETWILNEAGITIKNNV 463 Y L L+ ++I WI + I +NV Sbjct: 388 YLETSHLQYLKPEVQRIADWIEEQGRIAKGDNV 420 >UniRef50_B9ZR50 Integrase family protein n=2 Tax=Gammaproteobacteria RepID=B9ZR50_9GAMM Length = 424 Score = 274 bits (701), Expect = 6e-72, Method: Composition-based stats. Identities = 112/457 (24%), Positives = 186/457 (40%), Gaps = 69/457 (15%) Query: 30 RQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTIGN 88 +K T T P K TF+WD+ V R T +GAKAFV+Q G++ R+TIG Sbjct: 4 TKKLTKRVCDAAT-PPEKGTTFIWDSAVAGFGLRVTAAGAKAFVWQGRVNGRSQRLTIGK 62 Query: 89 INDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQ 148 ++ ARAEA+R+ + +G DPR K + +T A +Y Sbjct: 63 PGALTVEKARAEAKRIAGEVASGKDPRAEKHARKV-----------KALTLREAVREYRD 111 Query: 149 ELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDY 208 R R + L+ + P++E+T D Sbjct: 112 A--------------------------RHLADTTRDSFDRAMKALSDWMARPVTEITRDM 145 Query: 209 IAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQG---IIPGDLAQDYNVRKMVPVS 265 +A ++ P A+R LRA + ++ Y ++P + + + K Sbjct: 146 VARRHRKLGEDSPAFANLAFRYLRAVLNHASEAHAYPDGRPLLPDNPVKRLSATKA-WYR 204 Query: 266 ASKADDCLQKEQLKSWFSAVRSLNNP------------------IASAYLQVLLLTGARR 307 + +++ +L+ W AV+ L +P IA VL+LTG RR Sbjct: 205 VDRRRTYIERHELRPWMQAVQGLAHPPEREPGEGKTKPKLRNGAIARDVFMVLVLTGLRR 264 Query: 308 EEIASLRWSDVDFKWSSMRIKDKIE-GERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFR 366 E LRW DV F ++ I D +PL+ Y+ ELL Q + +VF Sbjct: 265 NEALGLRWEDVSFAGRTLTIPDPKNYQPHTLPLSDYLVELLKARQQE-----SGGEYVF- 318 Query: 367 SNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSA 426 S++ + R A +R ++ + + H LRR+F T+AE ++VP V ++ HK + Sbjct: 319 SDAAGTRFQNLRYAVDRVAEVSGVRAM-PHDLRRTFATVAESLDVPAYAVKALLNHKTTG 377 Query: 427 LAEKHYRRRPLDLLRKWHEKIETWILNEAGITIKNNV 463 Y + + LR ++I ++L G+ +V Sbjct: 378 DVTAGYIQMTPERLRGPMQRITDFMLAAGGLRDGADV 414 >UniRef50_B2I529 Integrase family protein n=3 Tax=Proteobacteria RepID=B2I529_XYLF2 Length = 410 Score = 274 bits (700), Expect = 6e-72, Method: Composition-based stats. Identities = 65/434 (14%), Positives = 135/434 (31%), Gaps = 54/434 (12%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNI 89 T L+ + AD L+ +G + F+ AG+ ++T+G Sbjct: 1 MPLTDTALKALKP----RDRIYSVADERGLSVEVYPTGGIVWRFRYRLAGRYEKLTLGKY 56 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 + +AR + +L+ G P K + +T E + +E Sbjct: 57 PALSLRNARLKRDEAASLVAMGTSPARQKQLAKVT--------AADAMTVRDFAERFFRE 108 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 + SR + + L + + P+ E+T + I Sbjct: 109 -----------------------IQSRDRKDSTMPRRYLDKDILPFVGDKPMREVTAEEI 145 Query: 210 AAWL-STERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 + + + Q +L+ ++ G++P + +R + A Sbjct: 146 RSLIWRKKEQGFDATAGQIRGVLKRLCDYAV----TCGLMPTNPVLALPMRHV--YKAVS 199 Query: 269 ADDCLQKEQLKSWFSAV-RSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI 327 D L ++++ + AV S L ++LLT R+ E+ RW V + I Sbjct: 200 RDRALSPDEIRLFLRAVWASRIRRQFKLALHLILLTMVRKSELLLARWDHVHLDQAQWHI 259 Query: 328 K---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRA 384 K I+ L+ L L V + + + ++ Sbjct: 260 PAEHSKTGKPHIVYLSRQAVVLFEALR----VLAGGSALVMPGSGTLTRPFAHNALNHAL 315 Query: 385 LVLA---ELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLR 441 + ++H LRR+ T + +V + + H + + R D R Sbjct: 316 GKAMQWQGIHAFTIHDLRRTASTWLHEHGWASDVVEKALNHSIGGVRGVYNRAEYADQRR 375 Query: 442 KWHEKIETWILNEA 455 + + +I + Sbjct: 376 QMLQCWADFIEKQL 389 >UniRef50_D2LD60 Integrase family protein n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LD60_RHOVA Length = 427 Score = 274 bits (700), Expect = 6e-72, Method: Composition-based stats. Identities = 71/439 (16%), Positives = 145/439 (33%), Gaps = 57/439 (12%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLA-CRATSGAKAFVFQSVYAGKTLRMTI 86 +++ T L G + + D + L SGAK++ + G+T ++T+ Sbjct: 1 MTK-ALTVRALENMR--PGASRREIPDGIIQGLYFVHQPSGAKSWAVRYRVGGQTRKLTL 57 Query: 87 GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDY 146 G + AR A + G D K +A + ++ + + Sbjct: 58 GTYPAIGLKPARDLASTALAAVARGED-----PAKAKKAAKEKEKAAPARDFVEAVAASF 112 Query: 147 LQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTP 206 ++ + +T + R + + L ++T Sbjct: 113 IERHSKQKNKETHIRETERILQR---------------------EIVPVWKGRKLGDITR 151 Query: 207 DYIAAWLSTERQNR-PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVS 265 + L PT+ +R W+ + +A P S Sbjct: 152 ADVHEVLDAIVNRGCPTMANRTLSTVRKMCAWAVDR--------SFIAVSPCHGIKAPAS 203 Query: 266 ASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSM 325 D L ++++++ + A + P ++LL T RR+E+A +RWS++DFK Sbjct: 204 EKSRDRLLSEDEMRAAWLAFEATGWPF-GPLAKLLLATAQRRDEVADMRWSEIDFKTRIW 262 Query: 326 RIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHN 382 I K +PL+ +L+ L +VF + K+ + A Sbjct: 263 TIPAARSKNGQAHEVPLSEAALAILDGLP----HVAGVSDYVFTTTGKT-PVSGFSRAKK 317 Query: 383 RALVLA------ELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPS---ALAEKHYR 433 +P +LH LRR+ + ++ P +V ++ HK ++ + R Sbjct: 318 AFDEQITRQLGEGIPGWTLHDLRRTAASGMTALKSPPHVVDAVLNHKSGTIKGVSAVYMR 377 Query: 434 RRPLDLLRKWHEKIETWIL 452 R + ++ Sbjct: 378 YGYAAEKRTALDAWGHFLT 396 >UniRef50_A7MWW9 Putative uncharacterized protein n=1 Tax=Vibrio harveyi ATCC BAA-1116 RepID=A7MWW9_VIBHB Length = 410 Score = 273 bits (699), Expect = 8e-72, Method: Composition-based stats. Identities = 65/443 (14%), Positives = 143/443 (32%), Gaps = 51/443 (11%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVY--AGKTL 82 MA + + +++ + D L R +G K+++F ++ K Sbjct: 1 MAKKIRPLSATQVKNLKSQAKE----FSIGDGDGLLLRIMPNGTKSWLFNYIHPSTKKRK 56 Query: 83 RMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVA 142 + +G D + AR + + ++ L+ GIDP+ + + AE + T Sbjct: 57 NIGLGKYPDVSLATAREQRQTMRELVAKGIDPKTHRDNQQ------TAEKLAAQDTLLHV 110 Query: 143 WEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLS 202 +++ + + +S+ +L LPL Sbjct: 111 AKEWFELKQHSVSSDYADDIWRSL----------------------ELHIFPNLGQLPLR 148 Query: 203 ELTPDYIAAWLSTERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKM 261 E+ + A L + L + ++ K + ++ +++ Sbjct: 149 EILAPTVIAQLRPLEAKGSLETVKRVCQRLNEVMTYAVNCGKVEANPIANI------KQV 202 Query: 262 VPVSASKADDCLQKEQLKSWFSAVRSLNNP-IASAYLQVLLLTGARREEIASLRWSDVDF 320 K + + L ++ +N + + L T R E W+++DF Sbjct: 203 FKKPKVKHMKTITPQDLSFLLESMSKVNIKLVTRCAFEFQLHTLTRPSECVKAEWNEIDF 262 Query: 321 KWSSMRIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEP 377 I K++ + IPL+ V +LL + + +VF S++K+G + Sbjct: 263 AQKLWTIPKDKMKMKRDHKIPLSDPVIKLLQFMK----PISFEHKYVFPSDAKAGSHMNS 318 Query: 378 RSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHY-RRRP 436 +S + + HG+R T + + H Y Sbjct: 319 QSVNAAIKRAGFSGKLVSHGMRSIGSTALNEQGFNKDAIELCLAHVDKNTIRDIYNNAEY 378 Query: 437 LDLLRKWHEKIETWILNEAGITI 459 L+ R + +I++ + T Sbjct: 379 LEERRNVMQWWSEYIISASKNTF 401 >UniRef50_B7RVJ7 Site-specific recombinase, phage integrase family n=4 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=B7RVJ7_9GAMM Length = 392 Score = 273 bits (699), Expect = 8e-72, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 148/442 (33%), Gaps = 61/442 (13%) Query: 30 RQKFTFERLRRFTLPEGKK-QTFLWDADVTTLACR---ATSGAKAFVFQSVY-AGKTLRM 84 + K T + ++ K + D + L ++ + GKT + Sbjct: 2 KVKLTNQYIKNPPPVPAHKTKEEHCDTALPGLLWEQRAVNHEWGSYRLRYKSEGGKTAYV 61 Query: 85 TIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWE 144 TIG D + AR AR L+ I+ G DP+ A+++K +T++ + Sbjct: 62 TIGRSCDISLAGARKRARHLKAQIELGADPQAE------------AKAKKQVLTWNAFFT 109 Query: 145 DYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSEL 204 D ++ + S K + A + N L+++ Sbjct: 110 D-----------------------HYLPHVKQHKRSWKNDLEMHNLRISAFIGNKRLNKI 146 Query: 205 TPDYIAAWLSTE--RQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMV 262 T + + ++ P H +L+R + + + + + + + Sbjct: 147 TRSEVQRFHASLVEEDLSPATADHHLKLIRQALNLAVDWELLEA--------NPVAKVKL 198 Query: 263 PVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKW 322 ++ + L E+++ +++ +N + + LL TGAR E S WSD+D K Sbjct: 199 FNQDNQVERYLSDEEMQRLLKVLKTDSNRVVCNVILFLLSTGARVSEALSAEWSDIDRKN 258 Query: 323 SSMRIKDKI---EGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRS 379 I+ + +R +PL +L+ L K +F G + Sbjct: 259 RVWVIQATNSKSKKKRSVPLNDVAIGVLDAL-----DTEGKHDRLFVGKR--GPLTTINK 311 Query: 380 AHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDL 439 R A L +H LR S+ +L V Q +GH + + Y + Sbjct: 312 VWFRIRSEAGLEDYRIHDLRHSYASLLVNAGHSLFEVQQALGHSDPKVTMR-YAHLSKES 370 Query: 440 LRKWHEKIETWILNEAGITIKN 461 L++ I K Sbjct: 371 LQRAANSASDKITEAMEAAAKA 392 >UniRef50_A1BGX1 Phage integrase family protein n=25 Tax=root RepID=A1BGX1_CHLPD Length = 419 Score = 273 bits (699), Expect = 9e-72, Method: Composition-based stats. Identities = 71/449 (15%), Positives = 145/449 (32%), Gaps = 55/449 (12%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRM 84 M + ++ + +K L D L T SG K + FQ + GK + Sbjct: 1 MPKRILPLSDAQVSKAK--PAEKDYKLSDGG--GLHLLVTTSGGKLWRFQYRFDGKQKLL 56 Query: 85 TIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWE 144 +G + + +AR +TL+ DP AK A +F + Sbjct: 57 ALGQYPEISLANARKRREEARTLLANEQDPSEAKKAAKKAEALKDAS------SFELVAR 110 Query: 145 DYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSEL 204 ++ + S R D ++ + P+SE+ Sbjct: 111 EWFGKNDPVWSPGHALTVMCRLEKD----------------------VFPAIGSKPVSEI 148 Query: 205 TPDYIAAWLSTERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVP 263 T I L + +++ + + D + R++ Sbjct: 149 TASDIRTMLLKIEARGAVETATRIKIMCGQVFRYAVATGRLE----HDPSAALKSREIFR 204 Query: 264 VSASKADDCLQ-KEQLKSWFSAVRSL-NNPIASAYLQVLLLTGARREEIASLRWSDVDFK 321 + + ++L A+ + + LQ+ L R E+ ++ WSD+DF+ Sbjct: 205 KREIRHHAAITDPKELAPLLMAIDEYQGTFVVKSALQLTPLLFVRPGELQNMEWSDIDFE 264 Query: 322 WSSMRIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPR 378 + I K+ ++PL+ +L L + +VF + + Sbjct: 265 EALWSIPAERMKMRQPHLVPLSRQSLSILQGL----HPATGHGRYVFTGRG--SRPMSNN 318 Query: 379 SAHNRALVLAELPH--ISLHGLRRSFGTLAEW-VEVPTGIVAQIMGHKPSALAEKHYRRR 435 S N AL ++ HG R + T+ + + ++ + H + Y R Sbjct: 319 SI-NAALRYLGYDSDTVTGHGFRATARTILDEVLGFRVDLIEHQLAHAVRDPNGRAYNRT 377 Query: 436 P-LDLLRKWHEKIETWILNE-AGITIKNN 462 LD R+ + ++ + AG+ + + Sbjct: 378 SFLDDRRQMMQAWADYLYSLKAGVKMPAS 406 >UniRef50_C6E138 Integrase family protein n=1 Tax=Geobacter sp. M21 RepID=C6E138_GEOSM Length = 433 Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats. Identities = 72/466 (15%), Positives = 143/466 (30%), Gaps = 88/466 (18%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRM 84 M+ +R FT +R+ + ++ R SG K++++ GK M Sbjct: 1 MSRARIVFTDTMIRKLKPDTNE----YRKSEGNGFTIRVMPSGFKSWLYLYAINGKRRCM 56 Query: 85 TIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWE 144 +G+ D ++ AR + ++ G+DP AK + E + +T ++ Sbjct: 57 GLGHYPDVTLETARDRFEAAKKMVKNGMDPLDAK--------EEEQEQHRKALTVKQLFD 108 Query: 145 DYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSEL 204 DYL ++ R + Sbjct: 109 DYLVRHAKLNKRESSWREDERLFK---------------------VNVEPEWGKRKAEHI 147 Query: 205 TPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPV 264 L P + + +L R ++ + + VPV Sbjct: 148 KKRDCIELLDKYADR-PALCHNVMKLTRKLFNFAVEKDILE--------HTPFTGVKVPV 198 Query: 265 SASKADDCLQKEQLKSWFSA--VRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKW 322 + L ++K + ++ + +++LLLTG R E+ + ++VD W Sbjct: 199 ELESRERILTDTEIKKLWRTELPKAAISDEVKQIIKLLLLTGQRVGEVCGITVNEVDGNW 258 Query: 323 SSM-RIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSN--------SKSGK 373 ++ + + K + LT +LL + G+ F S K Sbjct: 259 WTIPQERSKNGQTHRVYLTDTAIKLL---------GKSINGYYFPSPVVKNDSDGKPVFK 309 Query: 374 IIEPRSAHNRALV-------------------------LAELPHISLHGLRRSFGTLAEW 408 I+ + + H + H LRR+F T Sbjct: 310 HIDENAVAYAIRKNLKDYQPRRPIKGDRISMVQVPEEKKMSIAHFTPHDLRRTFSTSLAK 369 Query: 409 VEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWILNE 454 + I+ +MGHK + + + R + R+ E +L+ Sbjct: 370 LGFNDEIIDAVMGHKKQGVIKIYNRHKYDTEKRQALVAWEKRLLSL 415 >UniRef50_Q0AH02 Phage integrase family protein n=2 Tax=Nitrosomonas eutropha C91 RepID=Q0AH02_NITEC Length = 393 Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats. Identities = 60/429 (13%), Positives = 137/429 (31%), Gaps = 47/429 (10%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNI 89 K T +R +KQ L D + L G+K + ++ ++ K +++G Sbjct: 1 MKLTDSAIRAAK--PKEKQYKLTDGN--GLTLLIYPDGSKHWRYRYLFNEKESMLSLGKY 56 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 + + AR+ + ++ GI+P + + +A + +F + Sbjct: 57 PETTLAQARSIHDGYKAILKQGINPSTHRKEEKRKAIV------SVENSFEAVARTWWMH 110 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 + + + R AD + P++ LT + Sbjct: 111 WKHAKTERHVAYTLRRMEAD----------------------IFPFIGAKPVNTLTAMHF 148 Query: 210 AAWLSTERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 + + + + ++++ + + A D ++ Sbjct: 149 IELVYKVQSRGALDIAKRVLTMCGQVMRYAVQHGLSE----RNPAADIKPADILKKRKKV 204 Query: 269 ADDCLQKEQLKSWFSAVRSLNN-PIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI 327 + + +L + + P+ LQ++ LT R E+ RW ++ F + RI Sbjct: 205 NHKRIPESELPDLLQKINQYDGQPLTRLALQLMTLTFIRTSELIGGRWEEISFDNAEWRI 264 Query: 328 K---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRA 384 K+ + I+PL+ +L + + V +F S ++GK + + Sbjct: 265 PPERMKMRSQHIVPLSDQAITVLREIKALNSDPV----LLFPSERRNGKTMSNNTIIYAL 320 Query: 385 LVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRR-RPLDLLRKW 443 + ++ HG R T+ + + H Y L+ RK Sbjct: 321 YRIGYKGRMTGHGFRGLASTVLHEKNFDHKWIELQLAHAERDEVSAAYNHALYLEQRRKM 380 Query: 444 HEKIETWIL 452 + +I Sbjct: 381 MQWWGEYIE 389 >UniRef50_A1WTV4 Phage integrase family protein n=1 Tax=Halorhodospira halophila SL1 RepID=A1WTV4_HALHL Length = 379 Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats. Identities = 71/406 (17%), Positives = 140/406 (34%), Gaps = 52/406 (12%) Query: 51 FLWDADVTTLACRA-TSGAKAFVFQSV-YAGKTLRMTIGNINDWKIDDARAEARRLQTLI 108 L D L +G+ + ++ +AG T + + + DAR+ AR +++ Sbjct: 20 VLSDRKAPGLIVEVRPTGSATYFYRYRNHAGLTRSCKLARFREISLKDARSLAREKASIV 79 Query: 109 DTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIA 168 +G DP+ K +R+ T Y +E + KR + T I Sbjct: 80 ASGHDPQEEK------------NTRRASPTLKE----YAEECYLPHAKSYKRSWKTDEI- 122 Query: 169 DHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNR--PTVTAH 226 + L +L +S++ + + A ++ + P+ Sbjct: 123 ------------------MLNHHALPTLGTKKMSDINRNQVEAIMNDMKSRGYAPSTVDR 164 Query: 227 AYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVR 286 L+ K + + + + + PV +K ++ L +E++ A R Sbjct: 165 VLTLISYMFKVAMDNEIPG------VVSNPTEKIKRPVIDNKIENYLTREEVNRMLEAAR 218 Query: 287 SLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSEL 346 N+P + +++ +LTGAR+ EI S R+ D D I G R + L ++ Sbjct: 219 RRNHPHIYSIIRMAVLTGARKAEILSARFEDFDLDNKIWNIPKGKNGSRKVILAEKAVQM 278 Query: 347 LNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAEL-PHISLHGLRRSFGTL 405 + L + +F + L + + + H LR S+ +L Sbjct: 279 VKELPKQE-----GTDLLFPQPGTDKPYQCIQKPFKAVLRDSGIDESVRFHDLRHSYASL 333 Query: 406 AEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWI 451 V V +++GH + Y LR ++ I Sbjct: 334 LVQGGVNIYEVKELLGHSQITTTMR-YAHLSAQGLRNHSNRLAETI 378 >UniRef50_C6XR20 Integrase family protein n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XR20_HIRBI Length = 402 Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats. Identities = 94/432 (21%), Positives = 158/432 (36%), Gaps = 44/432 (10%) Query: 30 RQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQ---SVYAGKTLRMT 85 + KFT L+ +K+ WD+++T R SG F + G TL +T Sbjct: 2 KIKFTLSNLKALK--PSEKRYVCWDSELTGFGARVQPSGKVVFFVRQSRFTETGTTLDIT 59 Query: 86 IGNIND-WKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWE 144 IG + W +AR++A L + GIDPR E T ++ + Sbjct: 60 IGALGQPWTPSNARSQATLLLLQLKQGIDPR-----------KKTNEINYTIASYFEVFC 108 Query: 145 DYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSEL 204 + + K + R+I+ H+ + S + + E Sbjct: 109 GQTNGRKKPRTIKLEESLFKRHISPHLGKVKLKELNTTHISNFMSKVANP---DKIIVEK 165 Query: 205 TPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPV 264 T A +S A+ +L A + + G++ + A++ Sbjct: 166 TKPRGKAVVS----GGKPTANRAHDILSAMLNHAVKA----GLLDKNPAKNVA-----KF 212 Query: 265 SASKADDCLQKEQLKSWFSAVRSLNNP----IASAYLQVLLLTGARREEIASLRWSDVDF 320 K + L + +++ +R + A L+VL+ TGAR+ EI SLRW +D+ Sbjct: 213 RTEKKERFLTEVEIQRLGQELRQAGSDGTNTYAIEALKVLMFTGARKSEILSLRWEYIDW 272 Query: 321 KWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSA 380 + S + D + I L V +LN L GWVF SN + + Sbjct: 273 QRSLANLPDSKNDMKSIVLPSVVISILNNLPNK-----GTNGWVFPSNDGNTHFTGLQKI 327 Query: 381 HNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLL 440 NR A L + +H LR +F ++ I+ + + H A ++ Y D L Sbjct: 328 WNRIRTNANLRDVRIHDLRHTFASVGAAEGKSLYILGKALTHANPATTQR-YAHLADDPL 386 Query: 441 RKWHEKIETWIL 452 R E I I Sbjct: 387 RHAVEAISNKID 398 >UniRef50_Q93UI5 Integrase-like gene 1 n=1 Tax=Escherichia coli RepID=Q93UI5_ECOLX Length = 401 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 78/431 (18%), Positives = 141/431 (32%), Gaps = 52/431 (12%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTIGNI 89 T ++R T P D + + T SG + + + + GK + G Sbjct: 1 MPLTDLKVRSLTTPGR-----YADGG--GMYLQITASGGRYWRMKYRHGGKEKLLAFGVY 53 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 I +AR + + + G DP K + +AE A TF ED+L Sbjct: 54 PLVGIKEARDKLFYAKQALSRGEDPGATKKLAKFQAEQDAAN------TFKAVAEDWLDH 107 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 A T R + A +L +LP+S +TP + Sbjct: 108 QAGRWEAITL----------------------SRTRASLEADVYPTLGSLPISSITPRQV 145 Query: 210 AAWLSTERQNRPTVTA-HAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 + + + A + +++ ++ ++ + DL +++ + Sbjct: 146 MDVVKKIEKRGASEIATRVLQRIKSIFRYGTTHQRIERNTMADLVPS----EILKPRRVQ 201 Query: 269 ADDCLQKEQLKSWFSAVRSLNN-PIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI 327 L QL + + S P L +L+LT AR E+ RW ++D K RI Sbjct: 202 HRAALAPAQLPEFLKKLASYEGEPHTVNALHLLMLTAARPGEVRGARWDEIDLKAKLWRI 261 Query: 328 K---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRA 384 K+ E ++PL+ + + VF S K + + N A Sbjct: 262 PPERMKMRSEHVVPLSSEAVAAIEAMR----PLSGNRDLVFPSPFYPSKPLSENT-FNSA 316 Query: 385 LVLAELPHI-SLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRR-RPLDLLRK 442 + ++ + HG R F T+A + + + H Y R L K Sbjct: 317 MARMGYKYLATAHGFRALFSTVANESGWSADAIERQLAHAERNQVRAAYDRGVRLPERVK 376 Query: 443 WHEKIETWILN 453 ++ Sbjct: 377 MMNWWAQYLAE 387 >UniRef50_B9MGW9 Integrase family protein n=1 Tax=Diaphorobacter sp. TPSY RepID=B9MGW9_DIAST Length = 428 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 73/460 (15%), Positives = 147/460 (31%), Gaps = 56/460 (12%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIG 87 ++ + +R G + L D + L G + F GK +++G Sbjct: 1 MATMALSDTTIRSVK--PGDPRRQLTDGNGLYLLLYVNGGKHGWRFDYKVQGKRKTISLG 58 Query: 88 NINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKV------TFSV 141 + ARA+A + L+ GIDP + K A + + +++ TF Sbjct: 59 TYPATSLSLARAKANAARELVAAGIDPSADRKSKKAAEKKVHEDAKLVAAGKPLNGTFEA 118 Query: 142 AWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPL 201 ++ + +AK R AD + P+ Sbjct: 119 VAREWFEVRSPEWAAKYAEKVLRRLEAD----------------------VFPHIGIRPV 156 Query: 202 SELTPDYIAAWLSTERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRK 260 ++T + A L A+ +++ +G + DL + Sbjct: 157 GDVTAPELLAVLRRIEDRGVIETAHRAHESCSQIFRFAVGAGLAKGDVARDL------KG 210 Query: 261 MVPVSASKA-DDCLQKEQLKSWFSAVRSL-NNPIASAYLQVLLLTGARREEIASLRWSDV 318 ++ ++ L ++L A + A L + + R E+ RW ++ Sbjct: 211 LLRKPRTRHFPAILCPKRLGELLRACDGYVGTHVVRAALSLAPMLLLRPGELRHARWDEI 270 Query: 319 DFKWSSMRIK---DKIEGE-------RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSN 368 + ++ I K E E I+PL ++L L + + VFR Sbjct: 271 NLNTATWTIPGERMKREREGKLNGMPHIVPLPRQAVQVLREL----HPITGRGELVFRGE 326 Query: 369 SKSGKIIEPRSAHNRALVLA-ELPHISLHGLRRSFGTLA-EWVEVPTGIVAQIMGHKPSA 426 + + + + + ++ HG R + TL E + + + I+ + H Sbjct: 327 RHHHRPMSENTVNAALRAMGFGADEVTGHGFRATARTLLDERLGIASEIIEAQLAHSVKD 386 Query: 427 LAEKHYRR-RPLDLLRKWHEKIETWILNEAGITIKNNVDM 465 + Y R L RK ++ ++ N V M Sbjct: 387 SLGRAYNRTEYLVQRRKMMQQWANYLEALRRGNATNEVQM 426 >UniRef50_A9IRV8 Int3 protein n=1 Tax=Bordetella petrii DSM 12804 RepID=A9IRV8_BORPD Length = 402 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 71/430 (16%), Positives = 140/430 (32%), Gaps = 47/430 (10%) Query: 32 KFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNIN 90 + ++ L D L +G++ + ++ GK IG Sbjct: 9 ALSDRAVKNAR--PKDAPYKLADGG--GLHLLVQPNGSRLWRYKFRLGGKEQVFAIGRYP 64 Query: 91 DWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQEL 150 D + +AR + L+ G+ P + A + +R TF + + Sbjct: 65 DVGLAEARERHLAARRLVADGVSPTAQRRDDRAR--MAEDAARAKAGTFKAVLDSWKATP 122 Query: 151 RTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIA 210 ++ T R R I ++ L P+ E+T +A Sbjct: 123 ARALAPATIR-QRDREIDRYLE---------------------PKLGARPVGEITRRELA 160 Query: 211 AWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKAD 270 L T + P V + + + + + G+I G+ +P + Sbjct: 161 DLLKTVATDTPEVARNLRTHMNSIFEHAVD----VGLIAGNPTPGPRA---LPARKQTSH 213 Query: 271 DCLQKEQLKSWFSAVRSLNN-PIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIK- 328 + ++L + +++ + P A ++LLLT R+ EI S RW ++D I Sbjct: 214 PAVAMDELGALLASIDASACQPATKAAFRLLLLTACRKLEITSGRWDEIDLDAGEWLIPA 273 Query: 329 --DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALV 386 K +PL+ ELL + + +VF K + P + + Sbjct: 274 DRMKTRTAHWVPLSRQAVELLRAVRAH-----SGGDYVFPHRDKPNTPMSPTALNEMLRR 328 Query: 387 LAELPHISLHGLRRSFGTLAEWV-EVPTGIVAQIMGHKPSA-LAEKHYRRRPLDLLRKWH 444 + +++HG R F T A ++ + + H P + + R D R Sbjct: 329 VGYRREMTVHGTRSIFSTWANAQPGANVDVIERCLAHAPRDKVRAAYNRHAYKDERRALL 388 Query: 445 EKIETWILNE 454 + + Sbjct: 389 QSWADVLDAA 398 >UniRef50_B0UGI0 Integrase family protein n=1 Tax=Methylobacterium sp. 4-46 RepID=B0UGI0_METS4 Length = 413 Score = 272 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 73/447 (16%), Positives = 149/447 (33%), Gaps = 67/447 (14%) Query: 33 FTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNIND 91 T + + R+ +++ + DA + L SG K++ + + + TIG Sbjct: 2 LTVQSVERYKPNP-ERRLEIPDATLPGLYLIVQPSGKKSWAIRYRINRQPRKFTIGPYPL 60 Query: 92 WKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELR 151 + + AR AR+ + G+DP K A A + + + T Y++ Sbjct: 61 FDLSAARERARQALQMAARGLDPYREKKAAEAAAIEAKDQVSRVVAT-------YVERHL 113 Query: 152 TGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAA 211 + + +H+ L + + ++ + A Sbjct: 114 KVKGKPGYAEQAEGLLRNHV---------------------LPHWGHRRIGDIGRADVIA 152 Query: 212 WLSTERQNRPTV-TAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKAD 270 + T + RA ++ + + + P+ D Sbjct: 153 LVDGLTDRGMTTGANRVFATTRALFNFALGRDL--------ITSTPFLGLKPPLPNPSRD 204 Query: 271 DCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFK-WSSMRIKD 329 L +++ + + P +Q+LLLTG RR E + WS++D W+ + Sbjct: 205 RVLSDAEVRWAWLCAERIGFPF-GPMVQLLLLTGTRRNETGEMVWSELDGTVWTIPGART 263 Query: 330 KIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLA- 388 K E ++PL P E+L + + G+VF + + S + + R Sbjct: 264 KNSLEHVVPLPPAAIEILAAVPRIAGRP----GYVF-TRNGSTPASDLSAGKRRLEAAML 318 Query: 389 -----------------ELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKP---SALA 428 +P +LH LRR+ + + +V ++ H+ S +A Sbjct: 319 TVAQSEAARRGEDPKAVTIPRWTLHDLRRTAASGMARLGTDPHVVEAVLNHRSGTISGVA 378 Query: 429 EKHYRRRPLDLLRKWHEKIETWILNEA 455 + R L+ R E + + A Sbjct: 379 AVYNRYAYLNEKRAALETWGKHVTSLA 405 >UniRef50_A7IMK8 Integrase family protein n=39 Tax=Bacteria RepID=A7IMK8_XANP2 Length = 467 Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats. Identities = 69/440 (15%), Positives = 132/440 (30%), Gaps = 59/440 (13%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYA-GKTLRMT 85 + + K T + ++ L D + + T G K F+ V G+ + Sbjct: 1 MPKIKLTKTAVDAAN--PQERDYELRDTTIPGFLVKITPTGRKTFMIAYVANNGQRRKPA 58 Query: 86 IGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWED 145 IG + ++ AR A+ + G DP + + + T ++ Sbjct: 59 IGRYGEITVEQARRIAQDWLAEVRRGADPSAER------------TASRQAPTVKELFDR 106 Query: 146 YLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 ++ + + + + K +G L +L ++ + ++T Sbjct: 107 FITDYSESRNKPS---------------------TVKSNRGFGKRHILPALGHMKVPDVT 145 Query: 206 PDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVS 265 IA + + P +R + R + Sbjct: 146 RSDIANLMKKMSK-SPVNANRVLSAVRKMFNMAEVWGMR-------PDGTNPCRHIPKFP 197 Query: 266 ASKADDCLQKEQLKSWFSAVRSL-----NNPIASAYLQVLLLTGARREEIASLRWSDVDF 320 + +++ F + +P +++ AR EI L WS VDF Sbjct: 198 ERGKTRLITDAEMRKLFEYLDRAEAEGLEHPFIILAIRLQFEFAARMSEIIELEWSWVDF 257 Query: 321 KWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSA 380 + D G P+ L + +V S K + P + Sbjct: 258 DNRRVVWPDSKTGGMSKPMNAEALRLFET-----APLLEDSPFVCPSVFDPKKAMSPYTY 312 Query: 381 ---HNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPL 437 R L A LPH+ HG+R T VP + + HK + + Y Sbjct: 313 YQGWKRILKRAGLPHVGTHGIRHRSATDIANSGVPVKVGMALTAHKTVTMFMR-YVHTED 371 Query: 438 DLLRKWHEKIETWILNEAGI 457 D +R E + +N G+ Sbjct: 372 DPVRAAAEAVTQRRMNVIGV 391 >UniRef50_C0N6F7 Site-specific recombinase, phage integrase family protein n=2 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6F7_9GAMM Length = 401 Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats. Identities = 59/437 (13%), Positives = 133/437 (30%), Gaps = 53/437 (12%) Query: 31 QKFTFERLRRFTL------PEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLR 83 T ++++ E K + D+ L G+K + ++ + G + Sbjct: 1 MPLTDKQIKNLKPGIRPDKSETNKPYKVSDS--HGLYIEVPLKGSKRWRYKFYFEGTERK 58 Query: 84 MTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAW 143 +++G + +AR + ++ ID GIDP + K + + T+ Sbjct: 59 LSLGTYPKISLKEARQKRDDIRKKIDAGIDPSYERRKKRL-------NASVSGNTYEEVA 111 Query: 144 EDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSE 203 ++ + + K +R + + + + Sbjct: 112 REWHARNKANWTKKYADLTLSRL----------------------EQNAFPWIGDRQIDK 149 Query: 204 LTPDYIAAWLSTERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMV 262 +T + + RL K++ + L + +K+ Sbjct: 150 ITAPELLTVIKRVFDRGAIETAHRIRRLSNTIFKFAIANGMTETNPAAALEGAFPTQKV- 208 Query: 263 PVSASKADDCLQKEQLKSWFSAVRSL-NNPIASAYLQVLLLTGARREEIASLRWSDVDFK 321 + +++ A+ + L++ L R I + W D+D + Sbjct: 209 ----KHHSAVTEPKKVAELLRAIDGYSGHFATRCALKLSALVMNRPINIRAAEWGDIDLE 264 Query: 322 WSSMRI---KDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPR 378 S RI + K IIPL+ E+L + + +VF + + Sbjct: 265 NSVWRIHMGRMKSRRTHIIPLSRQALEILEEIR----PLTGEGKYVFPCMRSKARPMSEN 320 Query: 379 SAHNRALVLA-ELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPL 437 + + +S HG R TL + V + + H S+ + + L Sbjct: 321 TICAALRRMGFSGEEMSAHGFRGMASTLLHEKGYNSDWVERQLAHIDSSTRSAYNHAQHL 380 Query: 438 DLLRKWHEKIETWILNE 454 D K ++ ++ Sbjct: 381 DDRAKMLQEWADYLDEL 397 >UniRef50_A5G0X2 Phage integrase family protein n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5G0X2_ACICJ Length = 410 Score = 271 bits (693), Expect = 4e-71, Method: Composition-based stats. Identities = 88/434 (20%), Positives = 160/434 (36%), Gaps = 45/434 (10%) Query: 36 ERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAGKTLRMTIGNINDWKI 94 +RL + ++ L D L R + G+K++ F+ AG+ M++G + D + Sbjct: 7 KRLNALAITNANREGNLHDGG--GLYLRVRADGSKSWAFRYTMAGRKHWMSLGPLRDVSL 64 Query: 95 DDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGI 154 +AR +AR+L+ L+ G DP + + A + +T TF Y++ R Sbjct: 65 SEAREQARQLRNLVRDGFDPLAQRRERQHLA------AEQTARTFDAVAAAYVEAHRAEW 118 Query: 155 SAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLS 214 S +A + + + P+SE++ + L Sbjct: 119 SNPKHAQQWENTLATYAS---------------------PIIGKRPVSEISLLDVRRVLD 157 Query: 215 TERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNV--RKMVPVSASKADDC 272 +P + + A + ++ G P + V A K Sbjct: 158 PIWAEKPETASRLRGRVEAVLAYATVHGWRSGDNPARWPGFLDQIYAPKAKVRAVKHHAA 217 Query: 273 LQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIK---D 329 L + ++ + +R A L+ +LT R E RW ++DF + I Sbjct: 218 LDYHDMPAFMAELREREAVSAR-CLEFAILTATRSGEARGARWDEIDFDAAVWVIPAPRM 276 Query: 330 KIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAE 389 K++ E +PL P ELL + ++G +F + + + A A++ Sbjct: 277 KMKKEHRVPLAPRAVELLREM---AGRSPRRDGLIFPGGAPGKPMTDVALAKAVAVLR-- 331 Query: 390 LPHISLHGLRRSFGTLAEWVE-VPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIE 448 P + HG+R SF A + P I + H E Y+R DLL K + +E Sbjct: 332 -PGFTAHGMRSSFRDWAAEMTSFPREIAEVALAHINKDRTEAAYQRG--DLLAKRRQLME 388 Query: 449 TWILNEAGITIKNN 462 W AG+ ++ Sbjct: 389 AWANYCAGLVEESE 402 >UniRef50_C0VMW7 Phage integrase n=2 Tax=Acinetobacter RepID=C0VMW7_9GAMM Length = 419 Score = 271 bits (693), Expect = 4e-71, Method: Composition-based stats. Identities = 61/429 (14%), Positives = 144/429 (33%), Gaps = 52/429 (12%) Query: 33 FTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNIND 91 + ++R+ E KK+ AD L SG + + + + G+ +TIG+ + Sbjct: 22 LSDAQVRKIKPLEKKKRY----ADEKGLYLEVTPSGGRFWRLKYRFNGRESTLTIGSYPE 77 Query: 92 WKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELR 151 + AR + + + IDP K ++ + + F +++++ + Sbjct: 78 ISLAQARRARDEARIQLYSNIDPNAVKNQRL--------QQTDESILFKSLAMEWMEDRK 129 Query: 152 TGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAA 211 I T R +L N+P+ ++ + A Sbjct: 130 AVIKETTY----------------------LRDLSVFEKDLFPALGNMPIDQIKGKDVLA 167 Query: 212 WLSTERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKAD 270 + + L +++ + + ++++ + K Sbjct: 168 CAKKIEARGALEMAKRSIPLTGRIFRFAIRKGIMEND------PTPHLQEALKPRKVKHM 221 Query: 271 DCLQKEQLKSWFSAVRSL-NNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIK- 328 L + + + +P+ +Q++ LT R E+ + W ++DF+ RI Sbjct: 222 ARLDILEFPPFLERMDRYHGSPMIKTAIQLMTLTFVRTAELRMMEWDEIDFETKLWRIPA 281 Query: 329 --DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALV 386 K+ I+PL+ EL+ L + +VF ++S + K + + Sbjct: 282 DKMKMAQPHIVPLSKQAIELIEQLR----PLTGNKQYVFYNHSTA-KPMSSNALLCVIRT 336 Query: 387 LAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSA-LAEKHYRRRPLDLLRKWHE 445 + ++ HG R T + + H+ +++ + + LD K + Sbjct: 337 MGYNGKMTGHGFRGLASTTLHEQGYMHDAIEIQLAHRVGNAVSQAYNHAQHLDYRIKMMQ 396 Query: 446 KIETWILNE 454 + +I Sbjct: 397 EWSDFIDGL 405 >UniRef50_P32053 Prophage CP4-57 integrase n=104 Tax=Gammaproteobacteria RepID=INTA_ECOLI Length = 413 Score = 270 bits (691), Expect = 7e-71, Method: Composition-based stats. Identities = 65/436 (14%), Positives = 137/436 (31%), Gaps = 53/436 (12%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSV--YAGKTL 82 MA + T ++ L+D D L +SG+K + F+ + Sbjct: 1 MARKTKPLTDTEIKAAK--PKDADYQLYDGD--GLTLLIKSSGSKLWQFRYYRPLTKQRT 56 Query: 83 RMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVA 142 + + G + DAR + L+ IDP+ + + ++ TF + Sbjct: 57 KQSFGAYPAVSLSDARKLRAESKVLLAKDIDPQEHQKEQ------VRNSQEAKTNTFLLV 110 Query: 143 WEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLS 202 E + +T ++ D ++ ++ ++ Sbjct: 111 AERWWNVKKTSVTEDYADDIWRSLERD----------------------IFPAIGDISIT 148 Query: 203 ELTPDYIAAWLSTERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKM 261 E+ + + + + + + ++ N+ K Sbjct: 149 EIKAHTLVKAVQPVQARGALETVRRLCQRINEVMIYAQNTGLIDA------VPSVNIGKA 202 Query: 262 VPVSASKADDCLQKEQLKSWFSAVRSLNNPI-ASAYLQVLLLTGARREEIASLRWSDVDF 320 K ++ +QL +R+ + + LLT R E A RW ++DF Sbjct: 203 FEKPQKKNMPSIRPDQLPQLMHTMRTASISMSTRCLFMWQLLTITRPAEAAEARWDEIDF 262 Query: 321 ---KWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEP 377 +W + K+ + +PL+ +L ++ ++F S K + + Sbjct: 263 NASEWKIPAARMKMNRDHTVPLSDGALAILEMMK----PLSGGREFIFPSRIKPNQPMNS 318 Query: 378 RSAHNRALVLAELPHI-SLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRR-R 435 ++ N AL A L + HGLR T P ++ + H + Y R Sbjct: 319 QTV-NAALKRAGLGGVLVSHGLRSIASTALNEEGFPPDVIEAALAHVDKNEVRRAYNRSD 377 Query: 436 PLDLLRKWHEKIETWI 451 L+ R + + Sbjct: 378 YLEQRRPMMQWWADLV 393 >UniRef50_A4VPC8 Site-specific recombinase, phage integrase family n=6 Tax=Proteobacteria RepID=A4VPC8_PSEU5 Length = 455 Score = 270 bits (691), Expect = 8e-71, Method: Composition-based stats. Identities = 72/438 (16%), Positives = 142/438 (32%), Gaps = 44/438 (10%) Query: 21 NWSRKMALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAG 79 + + T +++ + L D L +G K + ++ G Sbjct: 46 SPQWSPTMPENLLTDAKIKSVK--PTDRDWKLSDGG--GLFLLVKPTGCKLWRWKYRLQG 101 Query: 80 KTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKV-T 138 K IG+ + +AR + + L+ GI P + AE ++ + + Sbjct: 102 KENLFAIGSFPQVSLAEARTAREKARALVKQGIHPAHERQQVKQRNLEALAERKRARESS 161 Query: 139 FSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLN 198 F+ + YL E++ + + R +R Sbjct: 162 FAKVAQAYLTEIKPVFAYSSYRTKESR----------------------IRKYLSPKFDG 199 Query: 199 LPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNV 258 +P+S++ I L + + H L A +++ + G++ + Sbjct: 200 MPMSDIGVKQIRPLLEECKTHGAWAAIHVKGDLSAIFEFAVVR----GLVEANPIPSLRG 255 Query: 259 RKMVPVSASKADDCLQKEQLKSWFSAVRSLN-NPIASAYLQVLLLTGARREEIASLRWSD 317 P S SK + +EQ++ ++ A+R P + L+++ LT R E A W + Sbjct: 256 LLRAPASESK--AAMTREQIQKFYQALRGYRGYPETALCLRLIALTACRPGEAADAEWEE 313 Query: 318 VDFKWSSMRIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKI 374 DF+ + R K + I PL+ +L L + ++F S G Sbjct: 314 FDFEDAVWRRPAAKMKARRDHISPLSTQAIAVLKGLQRI----TGGGRYLFPHRSGKG-F 368 Query: 375 IEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYR- 433 P + + H R +F T A + + + H S Y Sbjct: 369 TTPNRLTYAMRDMNLGRGTTPHCWRTTFSTWANENGFRPDAIERQLAHVESNKVRATYNK 428 Query: 434 RRPLDLLRKWHEKIETWI 451 LD R + ++ Sbjct: 429 ALLLDQRRSLLQAWAGYL 446 >UniRef50_B4X5T7 Site-specific recombinase, phage integrase family protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4X5T7_9GAMM Length = 398 Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats. Identities = 65/434 (14%), Positives = 135/434 (31%), Gaps = 47/434 (10%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTI 86 + K + ++R K + D + + G K + F+ + GK R+++ Sbjct: 1 METNKLSDVKIRAAK--PQDKLYSISDGE--GMFLEISPKGGKWWRFKYRFNGKQKRLSL 56 Query: 87 GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDY 146 G + AR + ++ + L+ +G+DP + + E+ TF+ E++ Sbjct: 57 GTYPSTSLKAARDKRQQARELLASGVDPAQQRKTEKLATETALRN------TFAGVAEEW 110 Query: 147 LQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTP 206 Q R D G + L + P+SE+T Sbjct: 111 AQNKVRSEKWTPTTEKKRRIWLD--------------------NGLMPYLGSRPISEITT 150 Query: 207 DYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSA 266 + L ++ + ++ + L V Sbjct: 151 AELWGVLQHTQKTSGYTANRLRGMASEIFNFAMATGRADNNPALPLQGQIAV-----KKE 205 Query: 267 SKADDCLQKEQLKSWFSAVRSLNNP-IASAYLQVLLLTGARREEIASLRWSDVDFKWSSM 325 L+ +++ A+ A ++ L R E+ WS++D K + Sbjct: 206 KHRLAILEPDEVGKMLRAIDGCQAAVTTKAAARLAPLVFVRPGELRHAEWSEIDLKKALW 265 Query: 326 RIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHN 382 I K+ ++PL+ +L + G+VF K G+ I + + Sbjct: 266 SIPAEKMKMRESHVVPLSRQAVAILKEIQ----PLTGSSGYVFEGT-KPGEPISDNTLNK 320 Query: 383 RALVLAELPHISLHGLRRSFGTLAEW-VEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLR 441 L ++ HG R TL + ++V + + H + Y R R Sbjct: 321 LLKALGYKGKMTQHGWRAIARTLLDEVLDVRVDWIEHQLAHSVRDANGRAYNRTSHLEGR 380 Query: 442 -KWHEKIETWILNE 454 + ++ Sbjct: 381 IGMMQLWADYLDKL 394 >UniRef50_C5V4I9 Integrase family protein n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V4I9_9PROT Length = 410 Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats. Identities = 64/452 (14%), Positives = 133/452 (29%), Gaps = 64/452 (14%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTIGNI 89 T ++ K L D L +G K + +A K + +G Sbjct: 1 MALTELAVKNAK--PKDKPYKLSDGG--GLFLLVQINGGKYWRLAYRFADKQKTLALGIY 56 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 D + DAR + + L+ DP K E+ + T +FS ++ + Sbjct: 57 PDISLADARERREQARKLLANDTDPSAIKK------ETKRILQTATVNSFSALAKELHKV 110 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 + + + + + P++E+ P + Sbjct: 111 KAPMWTEGHAKQW----------------------MLNMEKYAFPVIGDRPVAEIEPLEL 148 Query: 210 AAWLSTERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 + + + + K++ K + + A+ P + Sbjct: 149 VGIMRNVEAQGTFETRDRLLQTISSTFKYAIAIGKAK----YNPAEIRLALADRPKVEN- 203 Query: 269 ADDCLQKEQLKSWFSAVRSLNNP-----IASAYLQVLLLTGARREEIASLRWSDVDFKWS 323 CL +++ ++ A IA A ++LLLT R E+ +W+D D Sbjct: 204 -FACLSTDEIPAFLRAFDDYQERGKVSLIAVAAFRLLLLTATRSSEVRFSKWADFDLDAG 262 Query: 324 SMRIKDK---------IEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKI 374 I + +PL+ +L L VF S + G++ Sbjct: 263 CWIIPAEQTGRKGKHGKRKPHAVPLSDQAIAVLRDLY----PVTGHGEHVFPSRNGMGRV 318 Query: 375 IEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRR 434 I + + + + HG R T + ++ ++ H Y R Sbjct: 319 ISENTVNKIIETMGYKGRQTGHGFRSLARTTLGDMGHRWEVLEAMLSHALENQTAAAYVR 378 Query: 435 -RPLDLLRKWHEKIETWILNEAGITIKNNVDM 465 + R +K ++ +K+ + Sbjct: 379 TTYFEERRGIMQKWADYLD-----AVKSGAQV 405 >UniRef50_C7JF17 Phage DNA recombinase n=8 Tax=Acetobacter pasteurianus RepID=C7JF17_ACEP3 Length = 443 Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 88/459 (19%), Positives = 153/459 (33%), Gaps = 67/459 (14%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAGKTLRMTIGNI 89 K T + T P K+ D +V A R TS G+K F+F G++ R+ +G Sbjct: 1 MKLTKSGIDLLTCPPEKRDVMFSDDEVKGFAVRVTSKGSKVFLFNYSKNGRSKRVKLGAY 60 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAE----SLQAESRKTKVTFSVAWED 145 D + AR A L+ + G DP K + E + ++ +T V + Sbjct: 61 GDLTVAQARKLAETLRGRVIAGEDPAEDKKAQAQAVEAMLAAQAEQAAADALTLGVLIDR 120 Query: 146 YLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 + + SA ++ R L++LL P L Sbjct: 121 WQENSLKDASASYRKEAPQRL-----------------------RSSLSALLARPAHALK 157 Query: 206 PDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVS 265 + A L Q+ PT RA W+ + +G + R +V Sbjct: 158 VAEVQARLDEVAQDHPTNARRIKAYGRAMYGWAEKRNLVEG--------NPFARVIVEGR 209 Query: 266 ASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSM 325 D L +L ++ A + P + Q+L LT RR E+A +RW ++ WS Sbjct: 210 EVSRDRVLSDRELGEYWRAAALIPYPF-GPFFQLLALTLQRRTEVAGMRWDEIAPDWSEW 268 Query: 326 RIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNK-EGWVFRSNSKSGKIIEPRSAH 381 I K ++ L+ +L + + ++ +V K+ + A Sbjct: 269 TIPAERTKNGKAHVVHLSDATRRVLAGIHRQVDAKTGHISPFVLSGTGKT-PVSGFSVAT 327 Query: 382 NRALVLAELPH----------------------ISLHGLRRSFGTLAEWVEVPTGIVAQI 419 R L L LH LRR+ T+ +++ + ++ Sbjct: 328 KRLKALIMLERAENEAEGQKNAGKNPSALPALGWHLHDLRRTGVTVMARLKIGPHVADRV 387 Query: 420 MGH---KPSALAEKHYRRRPLDLLRKWHEKIETWILNEA 455 + H S + + R L + +L A Sbjct: 388 LNHIEGTISGVTAVYQRHEFLTERAVALDIWVAHVLRVA 426 >UniRef50_D1B120 Integrase family protein n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B120_SULD5 Length = 419 Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats. Identities = 68/452 (15%), Positives = 147/452 (32%), Gaps = 51/452 (11%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQS-VYAGKTLR 83 M T L++ + E D L +G+K + G Sbjct: 1 MPKKVLPLTDTELKKSKIQEK----TYRLTDGAGLYLLVEPNGSKGWRLDYTRPNGGRNT 56 Query: 84 MTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKA----VKIAEAESLQAESRKTKVTF 139 +++G + +AR + L+ I G+DP + + ++ E E+ AE + + TF Sbjct: 57 ISLGTYPTITLCEAREKRDELKKQIKKGVDPSLERKGVKELQREEKEADHAEEERKQNTF 116 Query: 140 SVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNL 199 D+ + + + K R + N+ Sbjct: 117 EKVARDFFESITIELVPKYHSSKLARL----------------------ENHIFPYMGNI 154 Query: 200 PLSELTPDYIAAWLSTERQ-NRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNV 258 P+ +++ I L + N+ ++ +++ + P ++ D + Sbjct: 155 PIDQVSRLMIIEHLERLKAANKIETARRILNIIEQVYRYAVTHELA----PHNIIADIDK 210 Query: 259 RKMVPVSASKADDCLQ-KEQLKSWFSAVRSLNNPI-ASAYLQVLLLTGARREEIASLRWS 316 R ++ + + ++ + I L++ +LT R I W+ Sbjct: 211 RYVIGKKEVRHFPTITDPVEIGKLVRMIDEYPGDISTKYALKLAILTAQRPYNIRFAEWN 270 Query: 317 DVDFKWSSMRI---KDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGK 373 + D + +I K K++ IIP+ + +L L N+ ++F + + + + Sbjct: 271 EFDLERDVWQISAEKMKMKRPHIIPIILQIKTILRELEPFTK---NRSQYLFPALTSNVR 327 Query: 374 IIEPRSAHNRALVLAE-LPHISLHGLRRSFGTLAE----WVEVPTGIVAQIMGHKPSALA 428 I + + L I HG R F T+A + I+ + + H Sbjct: 328 PISENTMNQALRRLGYTKEEIVSHGFRAMFSTIANEHIPEHGFHSDIIERHLAHSEQNKT 387 Query: 429 EKHYRRR-PLDLLRKWHEKIETWILNEAGITI 459 + Y R L+ R E ++ Sbjct: 388 KGAYNRAEYLNERRGLIEWWANFLDKVRMNKP 419 >UniRef50_C6QCE7 Integrase family protein n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QCE7_9RHIZ Length = 418 Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 141/442 (31%), Gaps = 44/442 (9%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNI 89 T RL + KK D L R SGA+++VF+ ++ K + +G+ Sbjct: 1 MPKTTHRLNAISASNIKKPGLYPDGA--GLYLRVKPSGARSWVFRYMHDRKPRYLGLGSA 58 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 + AR+ A + +D G DP AK AE A + +TF E Y+ Sbjct: 59 ASVSLATARSLAGDARRQLDLGQDPIEAKR----AAERETAADKARAMTFKECAEAYMAA 114 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 + ++ + ++ +T + + Sbjct: 115 HEPSWKNAKHCEQWHSTLRRYL---------------------YPKFGGIAVALVTTEMV 153 Query: 210 AAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVS--AS 267 + + P + + I W+ + + G P P Sbjct: 154 FEAIQPIWHSMPETASRVRGRIEVVIDWAKARGAFSGENPARWRGHLANLLPKPSKVAKV 213 Query: 268 KADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI 327 + + + L + S +R+ + L+ +LT AR E +WS+ D + + Sbjct: 214 EHHAAMPFDDLPALMSELRAATGLTSR-ALEFTILTAARTTEALGAQWSEFDLEKKIWTV 272 Query: 328 K---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRA 384 K + +PL+ E++ L +VF + Sbjct: 273 PAVRMKAGKDHRVPLSTRAVEIIKELETVKR-----NEFVFPGEKPGRHLSNMSMLM--L 325 Query: 385 LVLAELPHISLHGLRRSFGTLAEWVE-VPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKW 443 L + +++HG R +F A P IV + H + E YRR L R+ Sbjct: 326 LRRLKRGELTVHGFRSTFRDWAAETTSFPNFIVEMALAHAIESKVEGAYRRGDLLEKRRA 385 Query: 444 HEKIETWILNEAGITIKNNVDM 465 + W+ A ++ D Sbjct: 386 L--MVAWMQYCAKAKMRPVADF 405 >UniRef50_A5EXV7 Integrase A2 n=6 Tax=Cardiobacteriaceae RepID=A5EXV7_DICNV Length = 401 Score = 268 bits (685), Expect = 3e-70, Method: Composition-based stats. Identities = 68/433 (15%), Positives = 148/433 (34%), Gaps = 46/433 (10%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTIGNI 89 + T + ++ P +L D L+ + T G+ + F+ G+ M++G Sbjct: 10 MRLTDKIIQTAKKPSRG---YLRLTDGDGLSLKITDRGSYFWNFRYYINGRERNMSLGRY 66 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 I+ AR EA L+ + G+DP + K A AE + K TF ++ Q Sbjct: 67 PAMSIEAARGEALELRYHLRQGLDPLAERKKKQAAYL---AEEKTQKETFEFVAREWYQL 123 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 R + + + P+S ++P + Sbjct: 124 KRPEWKNEKHAQQVITTLE---------------------QFVFPFIGKKPISRISPPEL 162 Query: 210 AAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKA 269 + P + + +RA ++ + + A ++ + Sbjct: 163 LKVMEKLYDR-PETASRVKQRIRAVFDYAIQTDRLS----RNPAIALPKIFRSTIAKQPS 217 Query: 270 DDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDF-KWSSMRIK 328 L +L +F + + NP + L++L+LT R E+ +W ++ +W + Sbjct: 218 ---LPARELGIFFKQLDTYGNPKTALALRLLILTMTRSGELRFGQWQELQGNEWHIPAER 274 Query: 329 DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLA 388 K+ I+PL+ + E+L+ L N + F + +++ + + + + A+ Sbjct: 275 MKMNRPHIVPLSDWALEILDELRSLRR---NNSPY-FVTGNRNTPLSD--TTLSLAMKRL 328 Query: 389 EL-PHISLHGLRRSFGTLAEWVE-VPTGIVAQIMGHKPSALAEKHYRRR-PLDLLRKWHE 445 HG R + T + + + H Y R L+ + + Sbjct: 329 GYAGRAVPHGFRATASTAMNESGLWNPDAIERQLAHTDENAVRAAYNRAEYLEERHRMMQ 388 Query: 446 KIETWILNEAGIT 458 +I + ++ Sbjct: 389 WWADYIRKKIRVS 401 >UniRef50_A6X585 Phage integrase family protein n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X585_OCHA4 Length = 444 Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats. Identities = 80/465 (17%), Positives = 164/465 (35%), Gaps = 56/465 (12%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGA-KAFVFQSVYA-GKTLRMT 85 + + + T + ++ + EG ++ L+D L R +G K F F A GK + Sbjct: 1 MPKLELTDKTIKAAKVSEGTRKLDLFDTLARGLCIRVGAGGVKTFYFVYSDASGKRVWNK 60 Query: 86 IGNIND----WKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSV 141 +G + + + AR +A+ L+ + G DP K S + +T Sbjct: 61 LGEYGEHTGQFTLAAARKQAKELRGYVAGGNDPAAEKR------------SERAALTVFD 108 Query: 142 AWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPL 201 E+YL R S ++ + R + S G T++ + + N+ L Sbjct: 109 MVENYLT--RAVASRRSVDEIARRLRKNVSGKDSEGNPLVDDKGKSTASEGV--IGNVKL 164 Query: 202 SELTPDYIAAWLSTERQNRPTV-TAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRK 260 S+L + + + V + +RA ++W+ + DL ++ Sbjct: 165 SDLHRRDLTKCIDALKDRGAHVEANRLFEDIRAMVRWARGRG--------DLDENLTENM 216 Query: 261 MVPVSASKADDCLQKEQLKSWFSAV-RSLNNPIASAYLQVLLLTGARREEIASLRWSDVD 319 P + + L ++++K + A+ + +++ L+TG R E++ + ++ Sbjct: 217 RKPTETAPRERWLTEDEIKIVWKALPDADMRESTRRIIRLCLITGQRVGEVSGMTREELS 276 Query: 320 FKWSSMRIKD---KIEGERIIPLTPYVSELL-------NVLAQSPNSDVNKEGWVFRSNS 369 + I K + + +PL+ +++ LA DV E +F S Sbjct: 277 DDATLWTIPGERAKNKQQHKVPLSSLAMQIILEQQADVEALAARKGRDVPDE--IFPSPG 334 Query: 370 KSGKI--IEPRSAHNRALVLA---ELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKP 424 G A R V +P + H LRR+ T E + V ++ + H Sbjct: 335 FHGPAGADSIPKALKRLDVNGNVLGVPAWTPHDLRRTCATHMEMLGVSPHVIGHCLNHIS 394 Query: 425 ----SALAEKHYRRRPLDLLRKWHEKIETWILNEAGITIKNNVDM 465 + + R + + IT + + Sbjct: 395 TTKATVTTAVYARYDYAKEKAEALSLWSDRLT---AITSGSGAKV 436 >UniRef50_B9KV34 Phage integrase n=4 Tax=Rhodobacter RepID=B9KV34_RHOSK Length = 434 Score = 267 bits (684), Expect = 5e-70, Method: Composition-based stats. Identities = 71/445 (15%), Positives = 144/445 (32%), Gaps = 67/445 (15%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTI 86 +R++ T + LR G + ++DAD+ A G +AF F G+ RMT Sbjct: 11 PNRERLTEKILRDAVPVPG-RDYQIFDADIRGFAVCIYRGGGRAFTFDYRVDGRQRRMTF 69 Query: 87 GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDY 146 +W + AR AR L+ ++D G DP ++ R+ F + Y Sbjct: 70 ARWPEWSVTAARERARELRRMVDAGGDPLGERSR------------RREAPRFQDLIDRY 117 Query: 147 LQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTP 206 L+E ++ + + ++E+T Sbjct: 118 LKEHVPRLAPVSAADQKSMLAKLVA----------------------PYWGRKLVTEITK 155 Query: 207 DYIAAWLSTERQNR---------------------PTVTAHAYRLLRAFIKWSNYQKKYQ 245 + L+ + R P +LR + Sbjct: 156 PDVEKLLAQIAEGRARPSKAKPNNRARKLQGPKPTPVRANRVGEVLRKMFNLAIEWGWR- 214 Query: 246 GIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGA 305 D + + L K+++ A+ + + A+ +++ +LTGA Sbjct: 215 --------TDNPANGFFRRIENPRERFLSKDEIDRLAKALDAAEDQRAAGIIRICMLTGA 266 Query: 306 RREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVF 365 R E+ R+ D + +R + P ++ ++ Q W+F Sbjct: 267 RVGEVRQSRFEQFDLEHCLWSKPAATTKQRRVHRVPISEDVSAIVRQRRLLVPKGSPWLF 326 Query: 366 RSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPS 425 + + E R R A++ + +H LR +F +L ++ +++GH Sbjct: 327 PGDVPGQPVKEIRRFWIRIQKEAQIEGVRIHDLRHTFASLLVSGGASLEMIGKLLGHTQM 386 Query: 426 ALAEKHYRRRPLDLLRKWHEKIETW 450 ++ Y LR + + + Sbjct: 387 QTTQR-YAHLMEGPLRAGVDAVASV 410 >UniRef50_Q5ZWK0 Phage related integrase n=15 Tax=Proteobacteria RepID=Q5ZWK0_LEGPH Length = 414 Score = 267 bits (683), Expect = 6e-70, Method: Composition-based stats. Identities = 101/445 (22%), Positives = 186/445 (41%), Gaps = 55/445 (12%) Query: 31 QKFTFERLRRFTLP-----EGKKQTFLWDADVTTLACRATSGA-KAFVFQSVYAGKTLRM 84 K + LP Q +D ++ R TSG KAF + K R+ Sbjct: 1 MKINKTNVENLPLPQAMEAGKTAQKRYYDDNLKGFGIRVTSGGAKAFFVEKFINKKRCRI 60 Query: 85 TIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWE 144 T+G+ + + A+ +A L I GIDP K +T + ++ Sbjct: 61 TLGHYPELTAEMAKNKALHLLGQIAMGIDPIAEKKAT-----------EVRDITLNQVFK 109 Query: 145 DYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSEL 204 DYL +T++ R I ++ ++ + + P+ + Sbjct: 110 DYL---------RTRKNLKPRTIDNYTHILDKA---------------FTHWKSKPMLSI 145 Query: 205 TPDYIAAWLSTER-QNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRK--- 260 T D IA + ++ A R+LRA ++ +Y+ L D V++ Sbjct: 146 TRDRIAKYHEKLGNEHGEAYANLAMRILRALFNFA--AGQYEDNSGHSLFIDNPVKRLSQ 203 Query: 261 -MVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVD 319 K ++ +L +W+++++ + N YL ++LLTG RR+E A+L+WSD+D Sbjct: 204 TRAWYRIEKRKTYIKSHELAAWYTSLQEIQNVTLRDYLLLILLTGLRRQEAATLKWSDLD 263 Query: 320 FKWSSMRIKDKIEGE-RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPR 378 K + I E +PL+ ++ +LL + ++F + +G IIEPR Sbjct: 264 LKAKTFTINTTKNNESHTLPLSDFLYDLLIARKEKAI-----NDYIFPGSGTAGHIIEPR 318 Query: 379 SAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLD 438 + + + H ++H LRR+F T+AE +++P + ++M HK S+ Y ++ Sbjct: 319 KTMAHVIKNSGV-HFTVHDLRRTFITIAESLDIPAYALKRLMNHKMSSDVTAGYIIVDVE 377 Query: 439 LLRKWHEKIETWILNEAGITIKNNV 463 LRK + I +IL G+ ++ Sbjct: 378 RLRKPMQLITDYILKCVGVVKSADI 402 >UniRef50_Q0EWR9 Integrative genetic element Gsu32, integrase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EWR9_9PROT Length = 391 Score = 267 bits (682), Expect = 8e-70, Method: Composition-based stats. Identities = 67/438 (15%), Positives = 145/438 (33%), Gaps = 59/438 (13%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNI 89 KFT ++ K+ + + T A R T+G K FVF G+ R++ G Sbjct: 1 MKFTDRSIKSIR--PTGKRFEVRETGRTGFAVRVSTTGTKTFVFIYKINGQKKRLSFGTY 58 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 +++A + ++ G DP + K + +++ K +VT + Y+ + Sbjct: 59 PAMSLNEAHLLYEEAKLELEKGNDPALIK--------AKKSQLEKNEVTIPELIKLYINQ 110 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 + + + L N E+ + Sbjct: 111 YAKVRKTSWEED-----------------------ERQLNKDILPRWKNRKAIEINKSDV 147 Query: 210 AAWLSTERQNR-PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 A L T + P +L+ ++ + + P + + Sbjct: 148 HAVLDTLIERGAPIGANRLLAVLKKVFNYAKEKGYVTN--------NPCDEITPPATETS 199 Query: 269 ADDCLQKEQLKSWFSAVR-SLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI 327 D L ++K+++ + + + L+ L+T RR+E+A RW+D+ + I Sbjct: 200 RDRVLTANEIKTFWHQLDCTNMHSSTKNALKFQLITLQRRKEVALARWNDIHGD--TWVI 257 Query: 328 K---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSG----KIIEPRSA 380 K + + L+ + +LL S ++F S +G + A Sbjct: 258 PAGTAKNKKRHDVHLSQFAKKLLIE----AKSYSKDSPFLFPSPCGAGSKHIRPDALSKA 313 Query: 381 HNRALVLAELPHISLHGLRRSFGTLAEWVEV-PTGIVAQIMGHKPS-ALAEKHYRRRPLD 438 R + + S H LRR+ T ++ +++ ++ H ++ + + Sbjct: 314 VKRNMETLMVQDFSPHDLRRTAATFLTKSKIANRLVLSLMLNHSQGKSVTAVYDKYEYFT 373 Query: 439 LLRKWHEKIETWILNEAG 456 +K E + Sbjct: 374 EQQKAWEAWGVKLEEIIA 391 >UniRef50_Q6AR70 Probable prophage integrase n=1 Tax=Desulfotalea psychrophila RepID=Q6AR70_DESPS Length = 399 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 61/427 (14%), Positives = 136/427 (31%), Gaps = 44/427 (10%) Query: 38 LRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTIGNINDWKIDD 96 L+ + K L D L+ T SG K ++++ K +G + ++ Sbjct: 4 LKALQVRNAKDPCRLSDG--LGLSFEVTKSGVKRWLYRYRLDDKQQMCVLGRYPELSLEQ 61 Query: 97 ARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESR-KTKVTFSVAWEDYLQELRTGIS 155 AR R + L+ G +P + K E S + R +F ++++ + S Sbjct: 62 ARKIHREARALVREGCNPARERRRKKQEVISKEKAERDDRSKSFEYIALEWIENNKESWS 121 Query: 156 AKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLST 215 ++ ++ N P+ +TP + + Sbjct: 122 PSHQQAVLASL----------------------RNNVFSAFGNTPVDTITPPDVLRTIRA 159 Query: 216 ERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQ 274 + + A +++ + D ++ + + + Sbjct: 160 IENRGSLEIVRKVLQRTNAVFRYAIQTGRATYNPAAD------MQGALKAKTVEHMPAVF 213 Query: 275 KEQLKSWFSAVRSLN--NPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIK---D 329 +L + S + +Q LT R E+ + RW +V+ + I Sbjct: 214 DSELAQLLQDISSNQKIHVTTKLAIQFTALTACRGGEVRNARWQEVNLDTNEWHIPAERM 273 Query: 330 KIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAE 389 K+ I+PL+ +L + ++G+VF S K + + + Sbjct: 274 KMRRAHIVPLSIQALAIL----HRAGALWGEDGFVFPSIRDRSKPMSDNAMGKAFRDMGY 329 Query: 390 LPHISLHGLRRSFGTLAEW-VEVPTGIVAQIMGHKPSALAEKHYRRR-PLDLLRKWHEKI 447 + HG R SF ++A + ++ + + H+ + Y R L+ R+ + Sbjct: 330 RGKATPHGFRSSFSSMAHEQSGFASEVIEKSLAHEEKNKVKGAYNRAEYLEQRRELLQWW 389 Query: 448 ETWILNE 454 + Sbjct: 390 GEKLHRL 396 >UniRef50_Q5P707 Phage-related integrase n=2 Tax=Proteobacteria RepID=Q5P707_AZOSE Length = 415 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 68/427 (15%), Positives = 139/427 (32%), Gaps = 46/427 (10%) Query: 33 FTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIGNINDW 92 T + R K + D+ L R SGAK + ++ A K +G Sbjct: 2 LTDAKCRAVKAT--DKTYRVADSHGLCLEVR-PSGAKFWRYRFRLADKQNMHALGEYPAM 58 Query: 93 KIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRT 152 + DAR + L+ GI+P + ++ AE TF ++++ R Sbjct: 59 GLQDARRARDEARELVRKGINPSHHRGLEKAERILALGS------TFETVTAEWIERNRP 112 Query: 153 GISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAW 212 SA R R D + P+++L ++ A Sbjct: 113 DWSANYIRQVRARMAGD----------------------VFPEIGQYPIADLKAAHVLAM 150 Query: 213 LSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDC 272 L + PT A + +++ ++ + + +R+ V + Sbjct: 151 LRKVEKRSPTQAALVKTWVGGVFRFAVVEQLREDD------PTFPLRRAVKPTQVNHHAI 204 Query: 273 LQKEQLKSWFSAVRSLNNPIA-SAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIK--- 328 L+ +++ ++ A+ + + + ++ T R E+ RW+ +D I Sbjct: 205 LRNDEIGAFLRAIAAAPGEVTVKEAVGLMWATACRINEVTGARWAGIDLDAGLWTIPPGR 264 Query: 329 DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLA 388 K + E ++ LT E+L + VF S + + + + Sbjct: 265 MKAKQEHVVTLTRQAVEILRRVQ----VHTGTLEHVFPHRSDRKRPMSGEAVRDLFRRAG 320 Query: 389 ELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRP-LDLLRKWHEKI 447 + HG+R +F T+A ++ + H+ + Y LD R+ + Sbjct: 321 YAGKFTPHGVRGTFSTIANGAGWRADVIELCLAHQERNQIRRAYNHAQLLDERRELLQWW 380 Query: 448 ETWILNE 454 Sbjct: 381 GDLSDQA 387 >UniRef50_Q3J1E6 Possible phage-related integrase n=2 Tax=Rhodobacter sphaeroides RepID=Q3J1E6_RHOS4 Length = 413 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 66/454 (14%), Positives = 137/454 (30%), Gaps = 61/454 (13%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNI 89 K + + + K+ + D+ L +G K + + + G RM++G Sbjct: 1 MKLSAAGVEKIK--PTDKRQEIPDSLCVGLYLIVQPTGKKGWQVRYRHGGVHRRMSLGAF 58 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 + AR AR+ G DP A + KT Sbjct: 59 PVLSLAGARERARQTLAAASAGTDPAAEVKAAKAPKLDGDRDKIKT-------------- 104 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 I +S + +++ + ++ + Sbjct: 105 ----------------LIGQFDKRHLSKLKSGAVVRRELERHVVSAWGERDVHQIGKRDV 148 Query: 210 AAWLSTERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 L + L F W + LA + Sbjct: 149 IDLLDGIADSGRVVTANRVRAYLAKFFGWCVERDI--------LATSPAAGVKPAGKETS 200 Query: 269 ADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFK-WSSMRI 327 L ++++ +++A + P + +VLLLTG R E+A + S++ W Sbjct: 201 RARVLTDDEIRWFWTACEAEGFPW-GPFGKVLLLTGQRLNEVAQMTDSEIRGDLWHLTAD 259 Query: 328 KDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVL 387 + K +PLT V L+ + + + + + ++F + ++ + A Sbjct: 260 RTKNGRAHDVPLTGAVRAALDEVERVTDEE-GRVRFIFTTTGRT-PVSGFFKARAVLAEA 317 Query: 388 A------------ELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKP---SALAEKHY 432 E+P + H LRR+ T + +P + ++ H + + Sbjct: 318 MVGIAQKERGEPVEIPRWTFHDLRRTAATGMARLGIPVRVTEAVLNHVSGTGGGIVAVYQ 377 Query: 433 RRRPLDLLRKWHEKIETWILNEAGITIKNNVDMR 466 R D R+ E ++L+ N V ++ Sbjct: 378 RHDYADEKRQALEAWARFVLSLVEGEADNVVRLQ 411 >UniRef50_A4VJM8 Integrase n=2 Tax=Gammaproteobacteria RepID=A4VJM8_PSEU5 Length = 467 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 93/490 (18%), Positives = 169/490 (34%), Gaps = 102/490 (20%) Query: 29 SRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAF-VFQSVYAGKTLRMTI 86 + F+ ERL PE K+ D + L R SG K F +++ + G+ R+T+ Sbjct: 5 THIAFSKERLLALPPPEAGKRATYHDTKIQGLQLRVSPSGVKTFSLYRRMKGGQPERVTL 64 Query: 87 GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDY 146 G ++ AR A + I+ G +P A+ E +F ++D+ Sbjct: 65 GRFPAMTVEQARKHASAVNAEIEAGGNPAAARRAIRVEQ------------SFGEVFDDF 112 Query: 147 LQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTP 206 L++ R + GE KR L + LS++T Sbjct: 113 LKKKRK-------------------RDGTPLGERTKRDYSDVLRLYLEPIKARKLSQITR 153 Query: 207 DYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSA 266 I A + + A ++ + ++ + ++G P ++ A Sbjct: 154 ADIKAIHAKVTKRSAAQADRALAVVSSVFSYAADMELFEGTSPAS--------RIQKNHA 205 Query: 267 SKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMR 326 D Q +L F A+ + S + + LLTGARR + ++ W D+D + R Sbjct: 206 PSRDRFAQGVELPYLFEAIGESS---LSDFFLLALLTGARRSNVQAMAWRDLDLEAHVWR 262 Query: 327 IKDKIEG-ERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRAL 385 I G + + L+P +L Q+ ++ +VF + K+G ++EP+ A L Sbjct: 263 IGMTKNGTPQNVTLSPEAVSVLRARKQTSSA----SAFVFPGDGKTGHLVEPKKAWAAIL 318 Query: 386 VLA----------------------------------------------------ELPHI 393 A ++ + Sbjct: 319 RRASMRRLLDCMEELGKLTAEERQQANAEVIVAAAAAEERYRGIADTLNIDPALYDMTDL 378 Query: 394 SLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWILN 453 +H LRR+ G+ I+ + + HK Y R LD +R+ +L Sbjct: 379 RIHDLRRTLGSWQAKTGASLSIIGKSLNHKTHQATA-IYARLDLDPVRQSVNTATQAMLA 437 Query: 454 EAGITIKNNV 463 AG+ +V Sbjct: 438 AAGMKQAASV 447 >UniRef50_A9IGA6 Phage-related integrase n=50 Tax=root RepID=A9IGA6_BORPD Length = 657 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 72/457 (15%), Positives = 152/457 (33%), Gaps = 59/457 (12%) Query: 17 TAILNWSRKMALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSV 76 + R + ++ + +R+ K+ L+D D +L A +G K+++F+ Sbjct: 4 IGPKSLLRSLEMA---LSDLIVRQAKTT--GKRYTLYDNDCLSLMVSA-AGGKSWMFRYS 57 Query: 77 YAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTK 136 + GK RM +G + +ARAE + Q LI GIDP+I + + A + Sbjct: 58 WLGKQKRMALGGYPALSLREARAERDKAQALIARGIDPQIERDQRRH------AAKLAGE 111 Query: 137 VTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASL 196 TF ++ +++ R + + S + L +L Sbjct: 112 YTFKNVFDAWVEHRRKELKEGRQSTLSQ-------------------ILRIFNKDVLPTL 152 Query: 197 LNLPLSELTPDYIAAWLSTERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQD 255 + + ++ + L+ + + T +++ + + A D Sbjct: 153 GKMSIYDIRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRYAL---VIAEGLEVNPAAD 209 Query: 256 YNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNP--IASAYLQVLLLTGARREEIASL 313 +V P + L +L + +R N +++L LTG R E+ Sbjct: 210 LDV-VAEPKPPVAHNPYLHLPELPEFLQKLRRYNPRGWQTQLGVRLLFLTGVRTGELRLA 268 Query: 314 RWSDVDFKWSSMRIK----------DKIEGER-------IIPLTPYVSELLNVLAQSPNS 356 D I + G+R I+PL+ E++ L Sbjct: 269 EPEQFDLDRGFWIIPPEVVKQLQDEMRKAGKRPQDVPPYIVPLSLQAIEIVRYLLGVMRP 328 Query: 357 DVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIV 416 + ++ S+ K I + + ++ ++ HG+R + T + P V Sbjct: 329 ---AQKYLLSHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTALNEIGYPKIWV 385 Query: 417 AQIMGHKPSALAEKHYRRR-PLDLLRKWHEKIETWIL 452 + H Y ++ R+ + + Sbjct: 386 DAQLSHSDPNKVSSAYNHAKYVEPRRRMMQDWADRLD 422 >UniRef50_A5FXQ0 Phage integrase family protein n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FXQ0_ACICJ Length = 412 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 90/453 (19%), Positives = 166/453 (36%), Gaps = 59/453 (13%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAGKTLRMTIGNI 89 +FT R+ T PEG+K +D ++ R TS G+K ++ Q A R+++G Sbjct: 1 MRFTMNRIAALTCPEGRKDALFFDEELPGFGVRVTSTGSKTYLAQYRGATGVRRVSLGKH 60 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 + DAR AR + + +G DP + K A Q+E+ T ++ + Sbjct: 61 GVISLADARNAARAILGQVASGGDPIAERRAKDEAARQAQSEA---AFTVEALIAAWVAD 117 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 + A + LA LL +P S +T Sbjct: 118 RQESRRASYLK-----------------------VAAAALRTHLAHLLTVPASAMTVRQA 154 Query: 210 AAWLSTER-QNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 A L + P RA W+ +++ LA + P Sbjct: 155 VAALDRVKAAAGPVAGNRLLAYARACFGWACKRQR--------LAMNPFAGLERPAREKS 206 Query: 269 ADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDV--D-FKWSSM 325 D L ++ + + A L+ P A + ++L+LT RR+E+AS+RW+++ D WS Sbjct: 207 RDRVLTDAEIGAIWRAAALLDYP-AGQFTRMLMLTLGRRDEVASMRWTEIAADGLTWSLP 265 Query: 326 RIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRAL 385 + K ++ L+ +L+ L + ++F + + + I S A+ Sbjct: 266 ADRAKNGKSHVVHLSEPARGILSALPR-----FENSDFLFTTTGE--RPISGFSGFKLAI 318 Query: 386 VLA-------ELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGH---KPSALAEKHYRRR 435 A + H RR+ T P + +++ H +A + R Sbjct: 319 DRAIEADLGRGIADWRFHDFRRAGVTWLAGAGFPPHVADKLLNHMSGSIQGVAAVYQRAE 378 Query: 436 PLDLLRKWHEKIETWILNEA--GITIKNNVDMR 466 L + + + +++ A G T N + +R Sbjct: 379 FLPERERALDAWASHVISAAAGGTTAGNVIALR 411 >UniRef50_B6JJF3 Phage integrase family protein n=2 Tax=Bradyrhizobiaceae RepID=B6JJF3_OLICO Length = 414 Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats. Identities = 72/436 (16%), Positives = 135/436 (30%), Gaps = 63/436 (14%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAG---KTLR 83 + + K T + P WD + T G K FV AG + + Sbjct: 14 MPQVKLTKSAIDALPTPSHD--LVYWDLGCPGFGVKVTPKGRKVFVVMYRTAGSGSRLRK 71 Query: 84 MTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAW 143 TIG ++ AR A+++ G D KA + + Sbjct: 72 YTIGPYGRVTLNQARVAAQKVFAAKLEGRDLAAEKAASRRRIVADR---------VEDLL 122 Query: 144 EDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSE 203 E ++ + + + A + + E Sbjct: 123 EAFIAQHVSQNRSAR------------------------EISRMLRREVGAVWGSRSIHE 158 Query: 204 LTPDYIAAWLSTERQNR-PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMV 262 ++ + A +++ Q P + ++ F +W + L + + Sbjct: 159 ISKRDVIAIVNSIEQRGAPIAANKMLKTIKTFFRWCVGRAL--------LDRSPADGVPL 210 Query: 263 PVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKW 322 P D L ++L A R L P +++L LTG RREE+A W +++ Sbjct: 211 PAKQVARDRVLSDDELVRVILAARQLGGP-YGNIVEMLALTGQRREEVARCTWDEINLTT 269 Query: 323 SSMRIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRS 379 + R+ K I L+ +L +VF S + + Sbjct: 270 RTWRLPSERTKNGKAHEIYLSDQAVAVLAR-------ATTGTKFVF-SKTGAFAFQGFGP 321 Query: 380 AHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGH---KPSALAEKHYRRRP 436 A + L+++ LH LRR+ + + V + +I+ H S +A + R Sbjct: 322 AKDEIDKLSDVTGWRLHDLRRTCVSGMARLGVAPHVADKILNHQTGTISGVAAVYQRHDF 381 Query: 437 LDLLRKWHEKIETWIL 452 L + E + Sbjct: 382 LAERKAALELWGAHVA 397 >UniRef50_B7UT12 Predicted P4-family integrase n=26 Tax=Enterobacteriaceae RepID=B7UT12_ECO27 Length = 411 Score = 264 bits (676), Expect = 4e-69, Method: Composition-based stats. Identities = 81/440 (18%), Positives = 152/440 (34%), Gaps = 52/440 (11%) Query: 35 FERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVF----QSVYAG------KTLRM 84 + L + K + +V L R + ++A+V + + L M Sbjct: 8 AKELSGLVVSRLKSEGMYAVGNVDGLYLRIRNQSRAWVLCVAMGTRINNLGRTVPRRLNM 67 Query: 85 TIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWE 144 +G + + +AR +AR L+ I GI+P K + A E L + K TF+ E Sbjct: 68 GLGPYPEVSLAEARDKARELRKQIRNGINPLQEKHEQKARQEIL----ARKKKTFAECCE 123 Query: 145 DYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSEL 204 + L+ + + K + + + +SE+ Sbjct: 124 EVLEVKDSEMKNKKHLAQWRSTLETY---------------------AYPFIGKKAVSEI 162 Query: 205 TPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPV 264 T + A L + + + I ++ ++ ++G P P Sbjct: 163 TKVDLLAILEPIWLTKNETASRLRGRIETVIDYAKAKEYFEGDNPAAWKGMLKPLLPQPS 222 Query: 265 SAS--KADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKW 322 K L Q+ S+ +R + ++ L+ +LT AR EI WS++D + Sbjct: 223 KVQITKHHAALPYNQIGSFMKELRERSG-VSPRALEFAILTAARSGEIRGAEWSEIDLEG 281 Query: 323 SSMRIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRS 379 + I K E +PL+ LL L + +VF + K G++ + + Sbjct: 282 KTWTIPASRMKAAKEHRVPLSDAAVALLKALPRFKGIS-----FVFPATRK-GQLSD--T 333 Query: 380 AHNRALVLAELPHISLHGLRRSFGTLAEW-VEVPTGIVAQIMGHKPSALAEKHYRRRPLD 438 A L ++ HG R +F A P ++ + H+ + AE Y+R L Sbjct: 334 ALLAVLKRMGYTDLTQHGFRSTFRDWAGETTNYPREVIEHALAHQLADKAEAAYQRGTLW 393 Query: 439 LLRKWHEKIETWILNEAGIT 458 R ++ W Sbjct: 394 PKRVAL--MDEWSGFCLANV 411 >UniRef50_A4U0F6 Phage integrase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U0F6_9PROT Length = 427 Score = 264 bits (675), Expect = 5e-69, Method: Composition-based stats. Identities = 83/459 (18%), Positives = 146/459 (31%), Gaps = 60/459 (13%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTI 86 + + K T + R T P Q +D + R + +G +++ + GK R+TI Sbjct: 1 MPKMKLTALSVARLT-PPESGQVDYFDTVLPAFGVRLSHAGTRSYFVMTRVGGKVARLTI 59 Query: 87 GNI------NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFS 140 G + +AR A L G DPR K + Q K TF Sbjct: 60 GKAKARDDSPGLTLAEARKRAGELTEQAGIGHDPRQIKKAEK------QVNEEKAANTFR 113 Query: 141 VAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLP 200 VA E ++++ A + + + A+ N P Sbjct: 114 VAAERFMRQHVEPRLAASTKMDYKWAL---------------------FGQDTAAWANKP 152 Query: 201 LSELTPDYIAAWLST-ERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVR 259 + +T + L + P L F W + + +R Sbjct: 153 VDSITRADVRRALDATIERGSPAGANKLLAYLSKFFNWCAERDLLE--------VPPTIR 204 Query: 260 KMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDV- 318 P S + L ++ ++A + + ++LLLTG RR E A +R S++ Sbjct: 205 IKPPSPKSVGERTLNHAEVADVWAAFEAEGG-LFCDLFKLLLLTGQRRTETAGMRLSEIS 263 Query: 319 --DFKWSSMRIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGK 373 D + I K +PL+P V ++ + S Sbjct: 264 DLDGEKPVWEIPGNRTKNSRPHAVPLSPQVVAIIKGRPIVGDLGFLLTTTGTTGTSGYSN 323 Query: 374 IIEPRSAH-NRALVLAE---LPHISLHGLRRSFGTLAEWV-EVPTGIVAQIMGHKPS--- 425 E A + A +P +LH LRR+ T+ + +V + H Sbjct: 324 AKERVDAWIAKRREEAGEQPMPRWTLHDLRRTMVTMMNEHVGIAPHVVEACVNHVSGMAK 383 Query: 426 -ALAEKHYRRRPLDLLRKWHEKIETWILNEAGITIKNNV 463 +A + + +D R+ E ++ NV Sbjct: 384 AGVAGVYNKALYMDDRRRALEAWAAYLDGIISPKDTTNV 422 >UniRef50_A6X006 Phage integrase family protein n=2 Tax=Alphaproteobacteria RepID=A6X006_OCHA4 Length = 426 Score = 264 bits (675), Expect = 5e-69, Method: Composition-based stats. Identities = 77/463 (16%), Positives = 149/463 (32%), Gaps = 73/463 (15%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAGKT---LRMTI 86 K T + K WD+++ + T K F+ G T + TI Sbjct: 5 VKLTKSYIDNLR--PTDKDAIYWDSELKGFGVKVTPKNRKVFLVMHRPKGHTGAAKKYTI 62 Query: 87 GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDY 146 G +W + AR AR + T G D + V+ RK+ + +++ Sbjct: 63 GTYGEWTVQQARDRAREVLTEGSKGNDVGAIERVERQ---------RKSSDILTDLVDEF 113 Query: 147 LQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTP 206 L++ + + L+ + +T Sbjct: 114 LKKHAAQNK------------------------THDETKRILERELLSKHGKKSIHVVTK 149 Query: 207 DYIAAWLSTERQNR-PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVS 265 I + L R P + +R F+ W + +A +P Sbjct: 150 HDILSVLEGIRDRGAPYMANRVLAAIRKFMNWCVSRDI--------IAISPANGISLPTR 201 Query: 266 ASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSM 325 D L ++ ++ A +S+ P +++L LT RR+E+ +RWS+++ ++ Sbjct: 202 EVSRDRVLTADETRAALMAAKSVGYP-YGNIVELLFLTAQRRDEVGDMRWSELNLDKATW 260 Query: 326 RIKD---KIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKS-------GKII 375 I K + L+ LL+ + + ++D + VF + + K Sbjct: 261 TIPAERVKNGKAHDVHLSKDALALLHSIPRFVSADNVESDLVFTTTGNTPFSGYSKSKTT 320 Query: 376 EPRSAHNRALVLA----------ELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKP- 424 + +A +L LH +RR+ T + V + I+ HK Sbjct: 321 LDKKMLEVLQKMAEDKGVNPELVKLTPWRLHDIRRTVTTELSKLGVAIHVADAILNHKSG 380 Query: 425 --SALAEKHYRRRPLDLLRKWHEKIETWILNEAGITIKNNVDM 465 S +A + + + + K + T N VD Sbjct: 381 VISGVAAVYQKNAFIQERQDALNKWCDHLNKICA-TTPNGVDT 422 >UniRef50_A4Y9I4 Phage integrase family protein n=3 Tax=Shewanella RepID=A4Y9I4_SHEPC Length = 432 Score = 264 bits (675), Expect = 5e-69, Method: Composition-based stats. Identities = 76/455 (16%), Positives = 146/455 (32%), Gaps = 79/455 (17%) Query: 34 TFERLRR-FTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTI--GNI 89 ++++ E ++ L R T G + + GK M G Sbjct: 12 NDKQIKSFLKSKELGRKAV-----GDGLYIRVQTEGVAYWEVRYSVNGKRRSMVPNGGVY 66 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 + +A+AEA +++ L GIDP + + + T T + ++D+ Q Sbjct: 67 PAMSLVEAKAEAAKVKLLAKQGIDPLAER----------ERQQEITIKTVNDLFDDWYQC 116 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 + + + ++ L ++++ I Sbjct: 117 TAPRLK------------------------HPEIPMRMYTKDIKPAIGQLKVTDVNARDI 152 Query: 210 AAWLSTERQ-NRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 A L + NRPTV + + G + A +N + + Sbjct: 153 RAILHKVVKSNRPTVANKTLLFCKQLFNHACKLDVASG----NPAAAFNTADAGGLEKN- 207 Query: 269 ADDCLQKEQLKSWFSAVRSLNNPI---ASAYLQVLLLTGARREEIASLRWSDVDFKWSSM 325 L ++ + F +R+ + +LL G R+ E+ + +WS+ DF Sbjct: 208 RTRVLSLNEIAAAFPVLRNSRPIFSHENYLAVALLLCLGVRKGELIAAKWSEFDFDQQVW 267 Query: 326 RIKD---KIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGK--------- 373 R+ K IPL+ +V E L L +VF + S + Sbjct: 268 RMPKERSKTGVGITIPLSEFVIEWLKELK----IIACGSEYVFPARKASKRREYIANDTL 323 Query: 374 -----------IIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGH 422 + L A + H ++H LRR+ TL ++VP I + + H Sbjct: 324 NHALAKLFGQKHDSNKQPFENLLGKAGVEHFTVHDLRRTCRTLLASLKVPPHIAERCLNH 383 Query: 423 KPSALAEKHYRRRPLDLLRKWHEKIETWILNEAGI 457 K + + L+ R+ +K+ I Sbjct: 384 KLKGIEGTYNHHDYLEERREALDKLAALISPIINN 418 >UniRef50_A3V8A4 Possible phage-related integrase n=2 Tax=Rhodobacteraceae RepID=A3V8A4_9RHOB Length = 386 Score = 264 bits (675), Expect = 5e-69, Method: Composition-based stats. Identities = 74/439 (16%), Positives = 138/439 (31%), Gaps = 67/439 (15%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRM 84 LS + T +R ++ ++DA R TSGA ++V + G+ R+ Sbjct: 2 PKLSTVRLTDTFIRSLR--PKDQRYDVFDASQPGFGVRVATSGALSWVLLTRENGRRKRI 59 Query: 85 TIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWE 144 T+G + AR AR + I G + TF A E Sbjct: 60 TLGGYPAISLSKAREAARLALSEIQEG-----------------TFGRKNAPATFETAVE 102 Query: 145 DYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSEL 204 ++ R +S ++ + L L L ++ Sbjct: 103 EWYAR------------------------EQRAKKSFRQVEQAMRLHVLPFLGRHQLDQI 138 Query: 205 TPDYIAAWLSTERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVP 263 + + + T + F ++ + L P Sbjct: 139 KKADLMRVIDRVAERGKLTQANRVRAFITRFFNFAIERDL--------LMSSPAAALPRP 190 Query: 264 VSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWS 323 D L +++L + + + P Q+L+LT RR+E+A +RWS++D + Sbjct: 191 AVEISRDRVLSRDELCAVWETAEQMGFPFGR-ITQLLILTAQRRDEVAGMRWSELDLDRA 249 Query: 324 SMRI---KDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSA 380 I + K I+ L+P LL+ + + N +F + +S + A Sbjct: 250 RWIISKERAKNGKAHIVHLSPQALALLSTIPRQ-----NGVDLIFTTTGRSA-VSGFSKA 303 Query: 381 HNRALVLAELPHISLHGLRRSFGTLAE-WVEVPTGIVAQIMGHKPS---ALAEKHYRRRP 436 + + H LRRS T + + +V +I+ H + + R Sbjct: 304 KAALDARSHVSDWRFHDLRRSAATFMAEELRITPVVVDRILNHVSGTVRGVTAVYLRGEH 363 Query: 437 LDLLRKWHEKIETWILNEA 455 L + N Sbjct: 364 LADREAALAAWGQLVENLV 382 >UniRef50_A6QCY9 Site-specific recombinase, phage integrase family n=2 Tax=Proteobacteria RepID=A6QCY9_SULNB Length = 409 Score = 264 bits (675), Expect = 6e-69, Method: Composition-based stats. Identities = 81/436 (18%), Positives = 160/436 (36%), Gaps = 44/436 (10%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMT 85 MA T + ++ +K+ L+D L+ G K + + + GK R++ Sbjct: 1 MARITNPLTDKEIKAAK--PKEKEYKLFDGGGLYLSI-TPKGQKWWRLKYRFDGKEKRIS 57 Query: 86 IGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWED 145 +G + + DAR + +T I GIDP + K E+++AE K++ TF + Sbjct: 58 LGVYPNTSLQDARQQREDFKTQIAKGIDPSRERKEKK---EAVKAEVFKSRNTFKSICLE 114 Query: 146 YLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 +++ R ++ T Y D A L + ++++T Sbjct: 115 WIELQRPQMAEATLSKYERTLEKD----------------------FYAPLGDKSMNDIT 152 Query: 206 PDYIAAWLSTERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPV 264 + + + L +++ K ++ D + + ++ Sbjct: 153 RHDLITIAQVIQDRGAVETAHRSLGLCNRIWRYALQFDKVG----HNIVSDISKKDVLRS 208 Query: 265 SASKADDCLQKE-QLKSWFSAVRSLNNP-IASAYLQVLLLTGARREEIASLRWSDVDFKW 322 +K+ + E ++ +A+ + + L++L LT R I WS+ D + Sbjct: 209 YKNKSFKTITDEVRIGELMNAIDNYTGEFTTKSALRLLPLTFVRPHNIRYAEWSEFDLEN 268 Query: 323 SSMRIKD---KIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRS 379 I K++ E +PL P ++L + N +VF S K I + Sbjct: 269 GIWTIPAEKMKMKKEHKLPLAPQAVKILKEIY----PYTNDAKYVFHSPISRLKAISENT 324 Query: 380 AHNRALVLAELPHISLHGLRRSFGTLAEWVE-VPTGIVAQIMGHKPSALAEKHYRRRPLD 438 + L I HG R F TLA + ++ ++ H+ + +K Y R D Sbjct: 325 LNMALKRLDFGGEIVSHGFRAMFSTLAYESGKFRSEVIEDLLAHQEANQVKKAYNRAAYD 384 Query: 439 -LLRKWHEKIETWILN 453 R+ E ++ N Sbjct: 385 AEKREIVEWYADYLEN 400 >UniRef50_A0KW55 Phage integrase family protein n=30 Tax=Gammaproteobacteria RepID=A0KW55_SHESA Length = 411 Score = 264 bits (674), Expect = 6e-69, Method: Composition-based stats. Identities = 80/438 (18%), Positives = 136/438 (31%), Gaps = 50/438 (11%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVY--AGKTLR 83 M S K T + + K L D L + K + F+ + K Sbjct: 1 MGRSTNKLTAKAV--LNAKAEAKPYRLSDGGN--LYLYVRTAGKTWEFRYIRPSTSKPTY 56 Query: 84 MTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAW 143 +G+ D + +AR +A + + GIDP++ K +A + A+ T Sbjct: 57 FGLGSYPDVSLAEARDKALEARKNLAEGIDPQLLKVENKLKAATENAQ------TLKHIA 110 Query: 144 EDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSE 203 + ++ + I KT + L ++ +S Sbjct: 111 QMWMDSKQGSIKPKTIEGNWRKL----------------------ELYAFPKLGSIAISR 148 Query: 204 LTPDYIAAWLSTERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMV 262 LT A L Q +LL + +S G I + R++ Sbjct: 149 LTAPIAIAALKPLEQKGHLETVKRTAQLLNEIMNFSVN----SGYIHANPLSGI--REVF 202 Query: 263 PVSASKADDCLQKEQLKSWFSAVRSLN-NPIASAYLQVLLLTGARREEIASLRWSDVDFK 321 S + L+ +L + + N ++ L T R E A RW ++DF Sbjct: 203 RKSKVEHLKALKPAELAELLQTIANANLLLTTRCLIEWQLHTMTRPNEAAGARWEEIDFD 262 Query: 322 WSSMRIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPR 378 I K+ E IIPLT + +L + + +VF S+ K +P Sbjct: 263 AKLWTIPESRMKMNREHIIPLTEHTLTILETVK----PISEQSQFVFPSSKDPQKHTDPE 318 Query: 379 SAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLD 438 + + + + HGLR T ++ + H Y R Sbjct: 319 TINKALGRMGLKGRTTGHGLRSLASTTLNEQGFDGDVIEAALAHVDKNQIRSAYNRTTYL 378 Query: 439 LLR-KWHEKIETWILNEA 455 R K E I A Sbjct: 379 ERRTKLMEWWSNHIATAA 396 >UniRef50_B5K290 Phage integrase n=2 Tax=Octadecabacter antarcticus 238 RepID=B5K290_9RHOB Length = 426 Score = 264 bits (674), Expect = 7e-69, Method: Composition-based stats. Identities = 74/442 (16%), Positives = 145/442 (32%), Gaps = 67/442 (15%) Query: 29 SRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIG 87 R + + +R +PE + ++D ++ L+ R SG+++FV +AG+ RM IG Sbjct: 12 KRLRLNEKTVRDM-IPEEDRDYQVFDTEIRGLSIRTLRSGSRSFVLDYRFAGRQRRMAIG 70 Query: 88 NINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYL 147 +W AR AR L+ ID G DP + + F + YL Sbjct: 71 RWPEWSATAARERARELRREIDEGRDPLGDR------------SELREAPRFKDMIDRYL 118 Query: 148 QELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPD 207 E ++ N ++++TP Sbjct: 119 AEHVPHLAPLNAGDQRAMLTKLVA----------------------PHWANKLVADITPH 156 Query: 208 YIAAWLSTERQNR---------------------PTVTAHAYRLLRAFIKWSNYQKKYQG 246 +A L+ Q R P +LR + Sbjct: 157 DVATLLNIIAQGRARPSKEKPNNRARKLQGAKPTPIRANRVGEVLRKMFTLAISWGWR-- 214 Query: 247 IIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGAR 306 D + + L +E++ + + + + A+ +++ +LTG+R Sbjct: 215 -------TDNPATGFKKRVETARERFLSQEEIGRLAAVLDAAEDQRAAGIIRICMLTGSR 267 Query: 307 REEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFR 366 E+ R+ + + +R I P +++ ++ Q S W+F Sbjct: 268 VGEVRQARFEQFNLELCIWSKPAATTKQRKIHRIPISADVAAIVRQRSVSVPRDNPWLFP 327 Query: 367 SNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSA 426 + + E R A LP + +H LR +F +L ++ +++GH Sbjct: 328 GDVPGQPVKEIRRFWINVQREANLPDVRIHDLRHTFASLLVSGGASLEMIGRLLGHTQMQ 387 Query: 427 LAEKHYRRRPLDLLRKWHEKIE 448 ++ Y LR + + Sbjct: 388 TTQR-YAHLMDSPLRAGVDAVA 408 >UniRef50_B7MX56 Integrase from prophage n=96 Tax=Gammaproteobacteria RepID=B7MX56_ECO81 Length = 419 Score = 264 bits (674), Expect = 7e-69, Method: Composition-based stats. Identities = 81/449 (18%), Positives = 152/449 (33%), Gaps = 51/449 (11%) Query: 24 RKMALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVY--AGK 80 R MA T +++ +K+ L D L SG+K + F K Sbjct: 5 RHMARKTHPLTTVQIKAAR--PAQKEYTLQDGG--GLFLLVKPSGSKLWRFSYYRPSDKK 60 Query: 81 TLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFS 140 + ++ G++ D + DAR +TLI G DP+ + K + E+R+ TF Sbjct: 61 RILLSFGSLEDVSLADARKRRSEYRTLISAGTDPQDHERQKR------ETEARRQGNTFE 114 Query: 141 VAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLP 200 + Q + A R + ++ + N P Sbjct: 115 NVAAAWYQVKISQNLAPNTIKDIWRSLDKYV---------------------FPFIGNTP 153 Query: 201 LSELTPDYIAAWLSTERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVR 259 + LT L+ ++ + + + ++ G+I + A + R Sbjct: 154 IDTLTARRFVEVLTPIKERGNLETLKRVLQRVNEVMDYAAN----SGLIDANPAMNV--R 207 Query: 260 KMVPVSASKADDCLQKEQLKSWFSAVR-SLNNPIASAYLQVLLLTGARREEIASLRWSDV 318 K P K ++ EQL A+ S ++ LLT R E +S RW ++ Sbjct: 208 KAFPSPVKKHMPTIRPEQLPELMQALSVSATERQTRLLIEWQLLTVTRPAEASSTRWDEI 267 Query: 319 DFKWSSMRIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKII 375 + I K+ + +IPL+ +L + + +VF S + + Sbjct: 268 NLDAKQWTIPAGRMKMRRDHVIPLSGQAMAVLEAMK----PISHHRNYVFPSLKDPQQPM 323 Query: 376 EPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRR 435 ++A+ + + HGLR F T A ++ + H + + Y R Sbjct: 324 NSQTANAALRRMGFAGVLVSHGLRAIFSTAANEEGFEPDVIEAALAHVDTNEVRRAYNRS 383 Query: 436 PLDLLR-KWHEKIETWILNEA-GITIKNN 462 R ++ A G+T+ + Sbjct: 384 NYIEKRIVLMRWWGEFVEAAATGVTLASG 412 >UniRef50_B3R9I1 Prophage INTEGRASE PROTEIN n=1 Tax=Cupriavidus taiwanensis RepID=B3R9I1_CUPTR Length = 412 Score = 263 bits (673), Expect = 8e-69, Method: Composition-based stats. Identities = 63/449 (14%), Positives = 137/449 (30%), Gaps = 61/449 (13%) Query: 32 KFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNIN 90 K + R + K F+ D + L R SG K F + AG +G Sbjct: 3 KLNNRLIERSKIQPKTK--FIADGE--GLYLRLEPSGTKTFCLRYTVAGSRKLKVLGTFP 58 Query: 91 DWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQEL 150 D I AR +A ++ L++ + S + ++ + +T + ++ Sbjct: 59 DMDIAAARKQASEMRELLEV---------HDSLPSASKEVDALTSPITVAQLATEW---- 105 Query: 151 RTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIA 210 + + + + + + + + +T +++ Sbjct: 106 -------------------EMRYCRQRYKRPDKELHYLKSDIVPVIGQELVQNVTGRHVS 146 Query: 211 AWLSTERQNRPTV-TAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKA 269 + +L++ ++ +K + Sbjct: 147 LVIGKIVDRGARTKANRTLCVLKSLFGYAVEHGYIDATPVA------MTKKGAGGAEKAR 200 Query: 270 DDCLQKEQLKSWFSAVRSLNNP---IASAYLQVLLLTGARREEIASLRWSDVDFKWSSMR 326 L +++++ + A+ S A L+++LLT R E +RW DVD Sbjct: 201 SRVLNPKEIETLWHALDSRRRRMNWRTKALLKLILLTAQRPGECCGMRWEDVDLANGIWF 260 Query: 327 IK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNR 383 + K + + ++ L+ +L + +VF S K + A R Sbjct: 261 LPAELTKSDRDHVVHLSHMAVSILK----MAEKETGGSVYVFNSVVKGRDVATTVDALTR 316 Query: 384 ALVLA-------ELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRP 436 A+ + + H LRR+ T V I +I+ H+ + + Sbjct: 317 AVARMLANGEFGAMKRFTPHDLRRTASTGMANAGVYPHITEKILNHRMKGVLAVYNHGEY 376 Query: 437 LDLLRKWHEKIETWILNEAGITIKNNVDM 465 L + E I G + ++ Sbjct: 377 LPERKAAMELWGRLIEGWVGNLVGQVSEV 405 >UniRef50_C8R2J0 Integrase family protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R2J0_9DELT Length = 420 Score = 263 bits (673), Expect = 8e-69, Method: Composition-based stats. Identities = 61/456 (13%), Positives = 140/456 (30%), Gaps = 66/456 (14%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGK----TLRMT 85 T ++R + ++ L+D L SG K + F+ + G+ R++ Sbjct: 1 MTLTDAQVRNVKAEDKTRR--LFDGG--GLYLEVAPSGGKWWRFKYRFPGQGKIQEKRLS 56 Query: 86 IGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWED 145 +G + +ARA+ ++ I GIDP + +F Sbjct: 57 LGTYPGVGLKEARAKRDEMRRQIAQGIDPANLRRSTRGSG--------ALAGSFEAVARL 108 Query: 146 YLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 + + T + R A L N P+ ++T Sbjct: 109 WHRNNSTDWAPSH----------------------STRLIRRLEAHVFPYLGNRPVGDIT 146 Query: 206 PDYIAAWLSTERQNRPT-VTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPV 264 + L + + T + +++ + + ++ + Sbjct: 147 APDLMNVLERIKNSGHTETARRIQTICGQVFRYAVQKGFAEYD------PSSALKGCLGK 200 Query: 265 SASKADDCLQ-KEQLKSWFSAVRSLNN-PIASAYLQVLLLTGARREEIASLRWSDVDF-- 320 + +K + ++ A+ + LQ+ L R E+ + RW + D Sbjct: 201 TTAKNMATITEPAEVGRLLQAIDEYPGTQVVRCALQLAPLFFVRSGELRNARWDEFDLVN 260 Query: 321 -KWSSMRIKDKIEGE----------RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNS 369 +W + K+ + I+PL ++L + + VF Sbjct: 261 REWKIPVERMKMRQDEKRARQGQVGHIVPLATQAVKILE---EELRPLTGRCALVFPGLR 317 Query: 370 KSGKIIEPRSAHNRALVLAELPH-ISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSA-L 427 + I + N + +++HGLR TL + + ++ + + HK + Sbjct: 318 SRDRAISDATLTNALRRMGYTGDEMTIHGLRHMASTLLHGLGFQSLVIERQLAHKDRNRI 377 Query: 428 AEKHYRRRPLDLLRKWHEKIETWILNEAGITIKNNV 463 + + L+ R+ + ++ + V Sbjct: 378 RGVYNQADYLEERRRMMQSWADYLGQLKAGKAEKVV 413 >UniRef50_C4GIW0 Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC 51147 RepID=C4GIW0_9NEIS Length = 394 Score = 263 bits (673), Expect = 9e-69, Method: Composition-based stats. Identities = 74/431 (17%), Positives = 144/431 (33%), Gaps = 46/431 (10%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNI 89 K T + + T P K L D L + G + + + Y K +G Sbjct: 1 MKLTDNQCKH-TPPPDKGVKQLSDGG--GLYLQIDAKGRRYWRIKYTYNQKQHTQHLGIY 57 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 + AR E +++ L+ GI+P+ + + +AE ++ TF + Sbjct: 58 PAMPLKAARMERDKIKLLLSQGINPKTHQEQQQ------RAEQKRITNTFEHVARKW--- 108 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 + K + + R + L +L ++++ P I Sbjct: 109 ---HTTKAEKGDWKPAH--------------ATRVLRQIELYLIPPLGSLSIADIEPLDI 151 Query: 210 AAWLSTERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 + Y + A ++ K +L + K P Sbjct: 152 LHAIQNVEHTGKIATANKVYDIAHAIFSFAARMKLCPYNAAAELKPELQQAKATPYR--- 208 Query: 269 ADDCLQKEQLKSWFSAVRSL-NNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI 327 +L + A+ +P LQ+ L AR E+ L+W+D+DF+ + Sbjct: 209 --HVTDTGELTALLQAIDGYTGSPQVKVLLQLAPLVFARPSELRLLKWADIDFQAACYHK 266 Query: 328 ---KDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRA 384 + K I+PL+ LL+ L +VF N +GK + +A Sbjct: 267 AAHEMKNGIAHIVPLSRQALALLSSLK----PVTGHYEYVF-HNKAAGKPLSEAAARKAL 321 Query: 385 LVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRR-PLDLLRKW 443 + L ++LHG R + TL + + + + + HK Y L+ R+ Sbjct: 322 SRIGWLDKVTLHGFRHTASTLLHEQQYSSDWIERQLAHKDPNTTRASYNFAKHLEQRRQM 381 Query: 444 HEKIETWILNE 454 ++ ++ + Sbjct: 382 MQEWADFLDSL 392 >UniRef50_B8L9U1 Phage integrase family protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L9U1_9GAMM Length = 399 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 74/432 (17%), Positives = 146/432 (33%), Gaps = 51/432 (11%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNI 89 T ++R +K L D L +G+K + + K + IG++ Sbjct: 1 MALTDFKIRGAK--PAEKPYRLSDGG--GLFLEIRPNGSKLWRYAYRLDSKQRLLAIGSL 56 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 D + DARA R+ ++ + G DP + + + A +E T + ED+ Sbjct: 57 QDVSLADARAAMRQAKSQVKLGQDPVLQRKIAKARSE------ESALNTVAENAEDWYSG 110 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 SA + R + L + P+ E+TP + Sbjct: 111 AEKSWSASHR----------------------DRARRYLDQRILPDIGKWPIREVTPADV 148 Query: 210 AAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKA 269 L + P V + L + + + + D + VR+ + Sbjct: 149 LKLLRKAEKAGPHVAIVTRQTLSSVFEHAIV------NLRADADPTHPVRRAIKKPPVMH 202 Query: 270 DDCLQKEQLKSWFSAVRSLN-NPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIK 328 + + + + N + + +++L LT R +E+ + +W+++D++ S +K Sbjct: 203 AVAHSAATMGKLLAGLDTYPGNRVTAIAIELLALTFVRTKELRTAKWANIDWEAESPLLK 262 Query: 329 -----DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNR 383 K + +PL P LL L + ++F + K + R A N Sbjct: 263 IDAGEMKKRRKHWVPLAPRAVALLRELQEI----TGAGTYLFPNQRDPKKPMS-REAVNM 317 Query: 384 ALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRR-PLDLLRK 442 L + IS H R + T P+ +V + H + Y L K Sbjct: 318 GLKYLGMDEISGHDFRATASTWLHEAGYPSAVVDMQLAHAKTNKTGAAYNHAEFLPDRIK 377 Query: 443 WHEKIETWILNE 454 ++ + + Sbjct: 378 MMDRWADHLAKQ 389 >UniRef50_C4SWJ3 Phage integrase n=7 Tax=Gammaproteobacteria RepID=C4SWJ3_YERIN Length = 430 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 73/442 (16%), Positives = 159/442 (35%), Gaps = 32/442 (7%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSV--YAGKTLRMTIG 87 + + + + + K + L SG K F ++ K ++ IG Sbjct: 8 KPLSSKAIEMMKPTDKNKADT---GENRGLRVTCGASGIKTFFYRYTSPVTNKLSQVKIG 64 Query: 88 NINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYL 147 + + AR + + L+ + G P + + + +T E YL Sbjct: 65 SFPQTSLAMARMKLQELKLIRSEGRCPASELKDEKQRLLEESQKPKAAVLTVEGLVELYL 124 Query: 148 QELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPD 207 E + + I +R + +K + +A L +E+T Sbjct: 125 TERIEDRKSNDGK----------IIPGARKKKGQKEVRRTLENDAVAKLGARVAAEITRK 174 Query: 208 YIAAWLSTERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGI--IPGDLAQDYNVRKMVPV 264 I ++ + + R L + +++ ++ P LA+ + + + Sbjct: 175 DIVELVNGVIERGAKVQAGNLLRELSSAYEFAIGLGRFDDNFANPALLAKSSLRQTNIKL 234 Query: 265 SASKADDCLQKEQLKSWFSAV-RSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWS 323 + + L +++L + + S P L++ L TG R E+ ++ W DVD Sbjct: 235 TCERGTRILSEKELAKFLHWLPGSAYTPTIKNVLRLTLWTGCRTGEVCNMAWEDVDLNKG 294 Query: 324 SMRIKDKIEG-ERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKI----IEPR 378 ++ +++ G ER + L+ + L +L +N + ++F S + I + Sbjct: 295 TIHLRETKTGVERYVQLSDQAIDFLKILR------LNSDKYLFPSQATKKPIQQKYLTEN 348 Query: 379 SAHNRAL-VLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPL 437 S R + ++PH + H LRR+ T ++ P + ++GH + + + Sbjct: 349 SWRLRESGQMLDIPHWTPHDLRRTVRTGLSRLQCPNEVAEAVLGHTRGGVEGIYNLYKYD 408 Query: 438 DLLRKWHEKIETWILNEAGITI 459 RKW + +I + I Sbjct: 409 AECRKWLQLWADYINSLQRIIP 430 >UniRef50_B5EC35 Integrase family protein n=1 Tax=Geobacter bemidjiensis Bem RepID=B5EC35_GEOBB Length = 486 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 93/477 (19%), Positives = 163/477 (34%), Gaps = 59/477 (12%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIG 87 + T + + + + +D + R + K + GK +R I Sbjct: 1 MPTIHITKTAIDKLER-PAEGRVDYFDDALRGFGIRVSPSTKTYFVMRRVNGKLVRAKID 59 Query: 88 NINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTK---VTFSVAWE 144 + + AR A + G DP K E + E K VT A + Sbjct: 60 TADKITAEQARKRAEGALADMGRGQDPNEEKRAAKKRTEDARKEEEAQKSQVVTLEDALK 119 Query: 145 DYLQELRTGISA-KTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSE 203 YL++ + T + +++D + L + S Q T + Sbjct: 120 VYLEKRKLKPKTLATYKQLFRLHLSDWLQLPAGEITSTMVAQRHTDIAT----GARNRTA 175 Query: 204 LTPDYIAAWLST---------ERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQ 254 L + + Q R R+LRA + ++ + GI+ + + Sbjct: 176 LKKAVVDKGKGKPKVEKSKVPDSQRREASADGTMRVLRAVLNYTFGDDEELGIVRPNPVR 235 Query: 255 DYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLR 314 + RK + + ++ L +W AV +L N +A YL LL TG RR E A L+ Sbjct: 236 TLS-RKKAWYKVPRRRNLIKNSDLPAWSKAVLALENAVARDYLLFLLHTGLRRNEAACLQ 294 Query: 315 WSDVDFKWSSMRIKDKIEGE-RIIPLTPYVSELLNVLAQ--------------------- 352 W VDF+ I D E +PL+ Y+ LL + Sbjct: 295 WQHVDFEDGCFTIIDTKNKEPHTLPLSDYLHTLLEGRKEGLKTELEAAKAALEASLHSPE 354 Query: 353 --------------SPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGL 398 + + +VF + ++G I +P+ A + S H L Sbjct: 355 YLTPKQRQAFRNRVAAAESRLQSPYVFPGSGRAGYIADPQKALEAVTQATGII-FSCHDL 413 Query: 399 RRSFGTLAEWVEVPTGIVAQIMGHK--PSALAEKHYRRRPLDLLRKWHEKIETWILN 453 RR+F T+AE +++ + ++ HK + Y D LR+ +K+ I Sbjct: 414 RRTFATIAESLDLSKYTIKALLNHKEQSGDVTGG-YIILNADRLREPMQKMTDAIQE 469 >UniRef50_A4SIA1 Phage integrase family protein n=2 Tax=Gammaproteobacteria RepID=A4SIA1_AERS4 Length = 408 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 76/436 (17%), Positives = 150/436 (34%), Gaps = 57/436 (13%) Query: 28 LSRQKFTFERLRRFTLPE---GKKQTFLWDADVTTLACRATSG--AKAFVFQSVYAGKTL 82 SR +FT + + + D ++ L C G K F+ + ++ G+ Sbjct: 5 PSRFRFTQKAIEALPPNPANAKSTEAEYSDTQISGLKCLVGKGEGNKKFLMRYLWHGRKR 64 Query: 83 RMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVA 142 + IG D ++ AR A + L+ GIDP+ K E ++ ++T Sbjct: 65 AIAIGRFPDVDLNTAREIATEYKRLLSQGIDPKQLK------------EDKRQELTLYEL 112 Query: 143 WEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLS 202 ++ ++ + S + + + + LS Sbjct: 113 FQ-----------------------LHYLPYAKHHKRSWQNDEQRFRDHLQPPMGSRLLS 149 Query: 203 ELTPDYIAAWLST-ERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKM 261 E+ + A ++ Q +P LL+A + WS + Q V Sbjct: 150 EINLEQGQALQTSLMSQCKPATNNRITTLLKAILTWSVRMGYLE--------QHPLVYLK 201 Query: 262 VPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFK 321 ++ L K +++ F A + N A Y+++LLLTG R++E+ +W +D Sbjct: 202 TLPENNQRTRFLDKAEIRRLFMAADADENRYAGQYVKLLLLTGLRKDELRLAKWEHIDKV 261 Query: 322 WSSMRIKDKIEGE-RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSA 380 ++ I G+ RI+ + ++L + ++F + Sbjct: 262 HQTLFIPHTKNGKSRILHMNHMAMQVLQD-----TPVIAGNAYLFPGQKPGQPLNNVTKP 316 Query: 381 HNRALVLAELPH-ISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDL 439 NR L A++ + +H R S L V +GH S +++ Y Sbjct: 317 FNRMLKRAQIEGQVCIHTCRHSVAALIVSSGGTLYDVQAQLGHSSSQSSQR-YAHLHASR 375 Query: 440 LRKWHEKIETWILNEA 455 LR ++ + Sbjct: 376 LRHTSAQVANCVEQAL 391 >UniRef50_Q1K3L6 Phage integrase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3L6_DESAC Length = 397 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 80/445 (17%), Positives = 157/445 (35%), Gaps = 57/445 (12%) Query: 26 MALSRQK-FTFERLRRFTLPEGKKQT---FLWDADVTTLACRA-TSGAKAFVFQSVYAGK 80 M ++ K T + P +T A T L +G++++ F+ + GK Sbjct: 1 MTRTKTKRMTVRVIESLPGPPSNSKTSNIEYSVAQETNLCLAVYKNGSRSWRFKQKFRGK 60 Query: 81 TLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFS 140 L +TIG + + +A + R + LI GIDPR + + +++T + Sbjct: 61 RLFITIGPYPLFSLQEAIDKTRHFKRLIADGIDPRQEQQPQ-------------SQLTLA 107 Query: 141 VAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLP 200 E D + + + ++ Q + + P Sbjct: 108 QFVEQ-----------------------DFLPYARKHYKTFHNQQNMLDKRIIKTFGATP 144 Query: 201 LSELTPDYIAAWLSTERQ-NRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVR 259 L++++ + + T LL + K + + ++ Sbjct: 145 LADISKREVMLFHQQVCDETSGTTGNRHLSLLSSIFKLALEYDLLE--------KNPCRG 196 Query: 260 KMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVD 319 D LQ+++ + +++ + ++ + +L+ G R+ E+ SLRW DV Sbjct: 197 IKKAKENRSRDRFLQEDEYTRFIQVLQTKLDQPSACAIFLLIALGMRKSELLSLRWEDVS 256 Query: 320 FKWSSMRIKDKIEGE-RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSN--SKSGKIIE 376 + ++D GE R + L LL + Q + WVF S S+SG + + Sbjct: 257 LADRHLHLRDTKNGESRYVALNSVSHGLLTKMKQKRKAS---NPWVFPSRTSSESGHLQD 313 Query: 377 PRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRP 436 R +++ + +H LRRS + V IV +I+GHK + Y + Sbjct: 314 VRRTFATVCRESKITGLRIHDLRRSHASHLLNAGVDISIVGKILGHKSLKSTQ-IYAKVA 372 Query: 437 LDLLRKWHEKIETWILNEAGITIKN 461 L + E I + Sbjct: 373 TSSLARTSEIASRKIEEVMNQAPDS 397 >UniRef50_A5EBE3 Putative phage related integrase n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EBE3_BRASB Length = 434 Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats. Identities = 72/473 (15%), Positives = 146/473 (30%), Gaps = 86/473 (18%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTI 86 + K + + +D ++ R SG+ ++ + R+ Sbjct: 1 MP-IKLSKRTVDAIAAGPL--PAIQYDVELRGFGVRIGASGSLSWFIEYRPGAGGRRVAK 57 Query: 87 GNI----NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVA 142 ++ + AR A+ L + G DP + + +TFS Sbjct: 58 RRYYFGSREFTPEQARQTAKELLANVALGGDPMKDRLH------------ERQSLTFSEF 105 Query: 143 WEDYL-QELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPL 201 E YL +E + T Y + + L L Sbjct: 106 AERYLSEEAEPKLKPGTVANY----------------------RIAVRRHANPEIGKLKL 143 Query: 202 SELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKM 261 +++ +A + + + + +++ + + Sbjct: 144 HKISNADLARLHTKIGKTSTVNANRTLECVSSIFRYAVTCDIV-------PVGHNPTKGI 196 Query: 262 VPVSASKADDCLQKEQLKSWFSAVRSLN----------------------------NPIA 293 ++ + L ++L SA+R + Sbjct: 197 RAFRENRRERFLNSDELARLGSAIREAETVGIPYEIDETKPTSKHAPKPENRRTKIDSYT 256 Query: 294 SAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQS 353 +A L++L+LTGAR EI L+W VDF+ + + D G + I L +L+ L + Sbjct: 257 AAALRLLILTGARLREILHLKWDYVDFERGLLLLPDSKTGRKAIVLNVPALAVLSSLDR- 315 Query: 354 PNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPT 413 K +V S + + A+L + LH LR + ++ + Sbjct: 316 ------KGQYVIFSEQEDKPRADLNRPWRTISARAKLQGVRLHDLRHTHASVGAGAGLGL 369 Query: 414 GIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWILNEAGITIKNNVDMR 466 I+ +++GH ++ ++ Y D L+K KI I G + R Sbjct: 370 PIIGKLLGHTQASTTQR-YAHLDSDPLQKASNKIAASISAAMGDDAGHVAQSR 421 >UniRef50_A1AE42 Integrase-like protein n=11 Tax=root RepID=A1AE42_ECOK1 Length = 418 Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats. Identities = 63/437 (14%), Positives = 138/437 (31%), Gaps = 62/437 (14%) Query: 33 FTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNIND 91 T +L+ K + D D L TSG +F + G+ + IG Sbjct: 2 LTDTKLKNLK--PQDKLYKVSDRD--GLYVAVLTSGTVSFRYDYRINGRRETLVIGQYGR 57 Query: 92 --WKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 + +AR E + L+ G P AK I + + TF+V + Y++ Sbjct: 58 DGISLAEAREELIAAKKLLKAGQSPAAAKRDGI--------KKIRGAETFAVHTDSYMKH 109 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 + S + + L L N ++E+T + Sbjct: 110 VILADSTRAMKQ------------------------AVIDRDILPVLGNKMMAEITTSMV 145 Query: 210 AAWLSTE-RQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 + A ++ + + +N + + A D + Sbjct: 146 RDLCDRIVERGGRATAVQAREIISSVYRHANDRGHG----LFNPAADIKPSSIAIFK--P 199 Query: 269 ADDCLQKEQLKSWFSAVRSLNN-PIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI 327 + L E++ +F + ++ L+++L+T R+ E + W ++DFK + I Sbjct: 200 RERTLTPEEIGLFFRTLDAIGAMGTMKMALKLVLITMVRKGEFTNATWDEIDFKKWTWTI 259 Query: 328 K---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRA 384 K +I L ++L L ++ K + + ++ Sbjct: 260 PSDRMKGSRAHVIYLPKQAQDILVGLQM----CAGGSEYLVPGRYNFRKPLSNAALNSLI 315 Query: 385 LVLAEL--------PHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRP 436 ++ ++H +RR+ TL P+ + + + H+ + + + Sbjct: 316 DRTVKIINEDGEHIQDFTVHDMRRTASTLLHEAGYPSDWIEKALAHEQKGVRAVYNKAEY 375 Query: 437 LDLLRKWHEKIETWILN 453 ++ I + Sbjct: 376 ARQRAYMLQQWADMIDS 392 >UniRef50_Q39TC0 Phage integrase n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39TC0_GEOMG Length = 414 Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats. Identities = 71/460 (15%), Positives = 148/460 (32%), Gaps = 84/460 (18%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-------TSGAKAFVFQSVYAGKTLR 83 +F+ + ++ K+ ++ + A G K F++ GK Sbjct: 3 TQFSDKFIQNLK--PEAKKYYIR--ESRGFAIVVHPSGIKNPKGTKTFLYIYTINGKRKE 58 Query: 84 MTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAW 143 + +GN + + DAR + + G DP ++AE + +TF Sbjct: 59 LKLGNYPEVTLKDARIKHGEAYARLVNGEDPVT--------PPVIKAEPQDENLTFGHFT 110 Query: 144 EDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSE 203 E YLQ + S K D L ++ Sbjct: 111 ELYLQWSKDNHSPKWHNTIKCALNKD----------------------ALPVWEYTLIAS 148 Query: 204 LTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVP 263 + A+L + V ++ + ++ ++ I + + + Sbjct: 149 IKRRDAIAFLENVARRGIQVIN-LHKATSSVFDYALEREY----IESNPMAGLKAKTIPA 203 Query: 264 VSASKADDCLQKEQLKSWFSAVRS-LNNPIASAYLQVLLLTGARREEIASLRWSDVDFK- 321 + + L ++K + A+ L+++++T R E+A++ ++ Sbjct: 204 LKPKARERFLSDSEIKHVWKAIDEGPGYDETKRALKLIMVTAQRPGEVAAMHRREIQTGV 263 Query: 322 -------------WSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSN 368 W+ + K E I LTP EL+ + EG++F S Sbjct: 264 GKPRCKICKRCGWWTIPAERMKNGEEHRIYLTPTALELI----------GDAEGYIFPSP 313 Query: 369 SKSGKIIEPRSAHNRALVL-------------AELPHISLHGLRRSFGTLAEWVEVPTGI 415 I + + LP + H LRR+ TL V VP Sbjct: 314 QDGQPINRNSLSQLVSRERNNKKPNGEMYPPYYGLPEWTPHDLRRTARTLLARVGVPEEH 373 Query: 416 VAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWILNEA 455 +++ HK L +++ R ++ ++ K+E ++ + Sbjct: 374 AEEVLSHKKEGLVDRYNRHDYMEEKKEALIKLEAELMKLS 413 >UniRef50_D0W4G5 Site-specific recombinase, phage integrase family n=4 Tax=Neisseria RepID=D0W4G5_NEICI Length = 428 Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats. Identities = 71/443 (16%), Positives = 133/443 (30%), Gaps = 56/443 (12%) Query: 24 RKMALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTL 82 RK + K ++R +K L D L TSG K + F GK Sbjct: 17 RKKNTVKMKLNDRQIRNAK--PAEKPYKLNDG--KGLYLYINTSGGKLWRFDFACNGKRK 72 Query: 83 RMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVA 142 ++IG + +AR A + ++ G DP AK + E TF Sbjct: 73 TLSIGKYPTVSLAEARETAETARRMLAAGQDPSEAKQQEKEER------KAAALNTFESI 126 Query: 143 WEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLS 202 + + T R + +P+ Sbjct: 127 ARRWHTDNLTRWKENHAA----------------------RVLRYFETDVFPVVGAMPIQ 164 Query: 203 ELTPDYIAAWLSTERQNR-PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKM 261 E+ ++I L + A ++ + + + +R+ Sbjct: 165 EIRVNHIKTLLDSVMARGVNNTAEKIREWAGAVFDYAALLELTESN------PAHVLRRY 218 Query: 262 VPVSASKADDCLQKEQLKSWF-SAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDF 320 +P + L +E+L +F + + P L +++L R E+ RW ++DF Sbjct: 219 IPSVPAGNRPALPREELTEFFCRLLLADIEPQNRIALMLIMLVFVRNTELRGGRWDEIDF 278 Query: 321 KWSSMRIK---DKIEG-----ERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSG 372 I K E +PL + ELL L ++F S +K Sbjct: 279 DARLWVIPAERMKHEKTAPKPPHTVPLADWTLELLAELKAI----TGDTPYLFPSRTKKD 334 Query: 373 KIIEPRSAHNRALVLAELPHI-SLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSA-LAEK 430 I + + + I + HG R ++ + + + H + Sbjct: 335 GFISENT-LGKIMNNMGYKGIATPHGFRALASSVLNEQGFNPDAIERQLAHVEENRIRAA 393 Query: 431 HYRRRPLDLLRKWHEKIETWILN 453 + R + R+ E ++ Sbjct: 394 YNRADYMTERREMMEWYSGYLRE 416 >UniRef50_B6WV41 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WV41_9DELT Length = 401 Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats. Identities = 64/435 (14%), Positives = 138/435 (31%), Gaps = 51/435 (11%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTI 86 + + K T +R +K + D+ L G K + + + GK I Sbjct: 1 MPK-KLTDTAIRTAK--PKEKPYKMADSG--GLYVLVNPGGGKLWRLKYRFEGKERLFAI 55 Query: 87 GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDY 146 G + +ARA A + +I G+DP A ++ +AE+ TF V ++ Sbjct: 56 GTYPAVSLKEARARAVTAKEMIARGVDP-------CAARKAAKAEAIARSRTFEVVAREW 108 Query: 147 LQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTP 206 ++ G + R R L + P++EL Sbjct: 109 HKKKLAGWTPNHARQIIRRL----------------------ETLAFPDLGSRPIAELGA 146 Query: 207 DYIAAWLSTERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVS 265 A L + ++ +++ + G+I D A Sbjct: 147 PDFLAVLGKVERQGHLETARRLAQICGQVTRYA----RLAGMIVADPASHLTEALTT-KP 201 Query: 266 ASKADDCLQKEQLKSWFSAVRSLNNPIASA-YLQVLLLTGARREEIASLRWSDVDFKWSS 324 + ++ + A+ ++ + L+++ R E+ W+++D + Sbjct: 202 VRLHAAITEPREIGALLRAIDDYPGDVSVSFALKIMPYVFVRSSELRRATWAEIDLDRAE 261 Query: 325 MRIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAH 381 I K+ ++PL V + L ++ VF + + I Sbjct: 262 WLIPAERMKMRRPHLVPLARQVVGMFRAL----HAITGNRELVFPGTASVTRCISDVGLL 317 Query: 382 NRALVLA-ELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRR-RPLDL 439 N L +++HG R T + ++ + H Y R + ++ Sbjct: 318 NALRRLGYGRDEMTVHGFRSMASTRLNEMGYRPDVIEAQLAHAERNSVRDAYNRAQYVEE 377 Query: 440 LRKWHEKIETWILNE 454 R+ ++ ++ + Sbjct: 378 RRRMMQEWADYLDSL 392 >UniRef50_B5J7N6 Site-specific recombinase, phage integrase family protein n=1 Tax=Octadecabacter antarcticus 307 RepID=B5J7N6_9RHOB Length = 376 Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats. Identities = 80/437 (18%), Positives = 151/437 (34%), Gaps = 72/437 (16%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTI 86 + + T L+ LPE Q WD ++ R + G+K+FV R T+ Sbjct: 1 MPKVILTEITLKSLPLPERG-QATYWDETISGFGVRVSQGGSKSFVVVHGVN--RQRETL 57 Query: 87 GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDY 146 G + AR +A++L I G+ + +++ A + + Sbjct: 58 GRYPTITLKQARGQAKKLLAQITLGV-------------------QQNRTISYKDARDLF 98 Query: 147 LQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTP 206 L+ T T Y R A L E+T Sbjct: 99 LEACETKNKKNTVDYYRKRLDAHF------------------------RFGRKRLDEITR 134 Query: 207 DYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSA 266 I + + + HA+ ++R + W+ ++ Q P Sbjct: 135 TDIQTRIRKIKTSSSEQ-NHAFVVIRTLMNWAVREQYVD--------QSPIASMKPPTKP 185 Query: 267 SKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMR 326 D L ++L + P + +L+LTG RR E+AS+RW + ++ Sbjct: 186 QARDHVLTDQELIQAYKVSLEHPYPF-GPIISLLVLTGMRRSEVASMRWDWISHGERTIT 244 Query: 327 IK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPR-SAHN 382 I K + + +P V +L + + +F S S++G + + Sbjct: 245 IPADVTKNKRVQTLPYADLVEAVLETIPEI-------GPHLFPSRSETGTVFNGWGKSKE 297 Query: 383 RALVLA-ELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGH---KPSALAEKHYRRRPLD 438 R + +LH LRR+F T + P + +++ H S +A + R +D Sbjct: 298 RFDASLENIEPYTLHDLRRTFATTHAKIGTPIHVTEKLLNHISGTISGVAAVYNRHSYMD 357 Query: 439 LLRKWHEKIETWILNEA 455 +R + +T++ N + Sbjct: 358 EMRTAVTEYDTYLENIS 374 >UniRef50_A1AQ50 Phage integrase family protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AQ50_PELPD Length = 427 Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats. Identities = 64/464 (13%), Positives = 148/464 (31%), Gaps = 84/464 (18%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTI--G 87 +FT + + + + W + + R SG KA+ F + G+ M + G Sbjct: 5 TRFTDKFIMSLKPADKE----YWKREGQGFSIRVYPSGEKAWYFIYTFDGRKKYMRLKDG 60 Query: 88 NINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYL 147 D + DAR + + GIDP + + Y Sbjct: 61 GYPDVSLADAREAFDIAKVKLKNGIDPLAELEQARLDRKHTPFVKEF----VDEFIRIYC 116 Query: 148 QELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPD 207 +E G + + + L+++ Sbjct: 117 KENNRGWKE---------------------------IERALKSEIVPRWGKRKLTDIKRR 149 Query: 208 YIAAWLSTERQNR-PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSA 266 + L ++ P + R W+ + + + + P Sbjct: 150 DLVLVLDEIKERGAPVMANRILAYTRKMFSWALERAALE--------VNPFLMMSRPNDE 201 Query: 267 SKADDCLQKEQLKSWFSAVRSLN-NPIASAYLQVLLLTGARREEIASLRWSDVDFKWS-S 324 + + L ++++K+++ + + L+++L+TG R EI + +++D +W Sbjct: 202 TSRERVLSEKEIKTFWHNLDECKMSDSIKRALKLILVTGQRPGEIIGMHRNEIDGEWWEI 261 Query: 325 MRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIE-------- 376 + K + + LT +L+ + G++F S + K E Sbjct: 262 PAARSKNKQAHRVFLTITAKQLI----------GDASGFIFESPANPAKPDETPPKPAKP 311 Query: 377 --------------PRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGH 422 P + H++ + ++PH + H LRR+ T +E+ ++ ++ H Sbjct: 312 YEVRTMTHDIKQNLPHTPHSKVIDRLKVPHFTPHDLRRTAATRWAEMEITGDMIDRLQNH 371 Query: 423 ---KPSALAEKHYRRRPLDLLRKWHEKIETWILNEAGITIKNNV 463 + + + R ++ E E + + ++V Sbjct: 372 ITRQKQGVGHVYNRYSYAREKQQALEAWEQKLNSIITSIGSDSV 415 >UniRef50_B3A9A3 Prophage integrase n=2 Tax=Escherichia coli O157:H7 RepID=B3A9A3_ECO57 Length = 412 Score = 261 bits (667), Expect = 4e-68, Method: Composition-based stats. Identities = 67/448 (14%), Positives = 132/448 (29%), Gaps = 52/448 (11%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSV--YAGKTLRM 84 +S + T ++ +K ++D L + G K + F+ K Sbjct: 1 MSVKPLTVTEVKGMK--PREKDYAVYDG--FGLLLNVSKAGGKVWRFRYSHPITKKRQTY 56 Query: 85 TIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWE 144 TIG ++ + +AR L+ +I G+DP K + E + TF Sbjct: 57 TIGRFPEFSLAEAREVRDELRRMIARGVDPVTEKKNRKIEMSLKNLQ------TFEAVAN 110 Query: 145 DYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSEL 204 + + K + + + + ++ Sbjct: 111 AWFAFKKGSELRKP---------------------TLYNIEYEVYKYLVPFFGKYSIEKI 149 Query: 205 TPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPV 264 T L L + ++ G + + Sbjct: 150 TAPVAINALDAVSDKNALQ-KKLISRLNEIMNYAVN----CGALKANPLLKIKTAFTGKK 204 Query: 265 SASKADDCLQKEQLKSWFSAVRSLNN--PIASAYLQVLLLTGARREEIASLRWSDVDFKW 322 +K+ L E+L + S S+ + IA L +LT R E WS++DF Sbjct: 205 --NKSLAALPVERLPEFLSWWDSVPHTYQIAHNALLFQILTMVRPGEAIKAEWSEIDFDS 262 Query: 323 SSMRIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRS 379 I K E ++PL+ +L + + +VF S+ + + Sbjct: 263 GLWIIPAHKMKCHREHVVPLSSQAISILRTMQEIKR-----GRYVFFSSRTKDAPMGRNT 317 Query: 380 AHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRR-PLD 438 ++LHG R + TL ++ + HK Y R L+ Sbjct: 318 IKTPIAASKFKGIVTLHGFRSMWSTLLNEEGFNPDVIEAALAHKSGDKIRDIYNRTIYLE 377 Query: 439 LLRKWHEKIETWILNEAGITIKNNVDMR 466 + + + + + I + M+ Sbjct: 378 QRKIMMQWVGDFFDDARKGVINRSGGMK 405 >UniRef50_B1JDS4 Integrase family protein n=3 Tax=Pseudomonadaceae RepID=B1JDS4_PSEPW Length = 402 Score = 261 bits (667), Expect = 4e-68, Method: Composition-based stats. Identities = 60/435 (13%), Positives = 123/435 (28%), Gaps = 47/435 (10%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTIGNI 89 T +R K + DA L T +G K + + + GK + +G Sbjct: 1 MALTDTAIRTAR--PRDKLYRIADA--QGLCLEVTTAGGKLWRLRYRFEGKAKMLGLGTY 56 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 + AR + L+ GIDP + +A + +T ++ Sbjct: 57 PSVTLAHARERRDAARKLLSQGIDPSAY-------KQQEKAAAEAQALTLETLAREWYDY 109 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 + + T + + + P +E+ + Sbjct: 110 NQPRWAPAT----------------------ASKALQYLESDIFPLIGKRPAAEVQRPEL 147 Query: 210 AAWLSTERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 + Q V + L ++ +G++ G+ A D +V Sbjct: 148 VDLVRKIEQREAFNVARKVRQWLSQIFRF----GLAKGVVAGNPATDLDVVAAHAPRTRH 203 Query: 269 ADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIK 328 + E + + + + +++LLLT R E+ W + D + ++ I Sbjct: 204 HPHVSEAELPELLEKLEAAQCDFTSKIAIRLLLLTAVRPGELRLAPWDEFDLESATWTIP 263 Query: 329 ---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRAL 385 K I+PL LL L + F + + + + + Sbjct: 264 AARMKARRPHIVPLPRQAVNLLRALHEL----TGTYPLAFPGRNDRSRPMSENTVNKALS 319 Query: 386 VLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRR-RPLDLLRKWH 444 + + HG R T + + + H Y L+ R+ Sbjct: 320 TMGYEGRQTGHGFRHLLSTSLNTRGYNRDWIERQLAHGDQDSIRDTYNHAHYLEQRREMM 379 Query: 445 EKIETWILNEAGITI 459 + + A T Sbjct: 380 QTWADHVDALAEQTS 394 >UniRef50_B2TTV9 Site-specific recombinase, phage integrase family n=25 Tax=Proteobacteria RepID=B2TTV9_SHIB3 Length = 439 Score = 261 bits (667), Expect = 4e-68, Method: Composition-based stats. Identities = 71/443 (16%), Positives = 145/443 (32%), Gaps = 55/443 (12%) Query: 24 RKMALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKA--FVFQSVYAGKT 81 RKM K T ++R + + G++ D + L R K + F+ AGK+ Sbjct: 19 RKMP----KLTDMQIRAW-IKSGERFEGRADGN--GLYLRYREADKTPTWRFRYKLAGKS 71 Query: 82 LRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSV 141 M IG+ ++ + AR A+ L + G D K EA + E+ K + S Sbjct: 72 RAMLIGSYSELSLSKARETAKELSARVALGYDVAGEKQKHKTEAL-AKMEAEKNAMRVSE 130 Query: 142 AWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPL 201 +Y + + + + ++ + Sbjct: 131 LAAEYFE-----------------------RQILPRWKHPDILRRRIDKDINPCIGSMKV 167 Query: 202 SELTPDYIAAWLSTERQNRPTVTAH-AYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRK 260 ++ P +I L A R R + + + + + V Sbjct: 168 EDVKPRHIDDMLKGIVDRGAPTIATDVLRWTRRIFDYGIKRHALE----INPCSAFEVAD 223 Query: 261 MVPVSASKADDCLQKEQLKSWFSAVRSLN--NPIASAYLQVLLLTGARREEIASLRWSDV 318 + D L +++L F A+R+ + ++LL R+ E+ + RW + Sbjct: 224 AGGK-EAARDRWLTRDELIQLFKAMRTAKGFSRQNEITFKLLLALCVRKMELCAARWEEF 282 Query: 319 DFKWSSMRIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKII 375 D + + K IPL E L L ++ WV + ++I Sbjct: 283 DLDGAVWHLPEERSKNGDPIDIPLPSPAVEWLREL----HTFSCNSAWVLPARKMQNRMI 338 Query: 376 E-------PRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALA 428 P + + ++P+ ++H RR+ T + V + + + H+ + Sbjct: 339 PHIQESTLPVALAKVRAEMPDVPNFTIHDFRRTARTHLAALGVDPVVAERCLNHRIKGVE 398 Query: 429 EKHYRRRPLDLLRKWHEKIETWI 451 + R + D + + + Sbjct: 399 GIYNRHQYFDERKAALAQWADLL 421 >UniRef50_Q2VZX9 Integrase n=1 Tax=Magnetospirillum magneticum AMB-1 RepID=Q2VZX9_MAGSA Length = 381 Score = 260 bits (666), Expect = 6e-68, Method: Composition-based stats. Identities = 74/425 (17%), Positives = 145/425 (34%), Gaps = 52/425 (12%) Query: 30 RQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSV-YAGKTLRMTIGN 88 + K + +L+ T+PEGK ++WD + AK F+ Q AG+ R IG Sbjct: 2 KLKLSAAKLKTLTVPEGKSGEYVWDTSLPGFGVYVGKTAKTFLVQFTTRAGEEKRHKIGR 61 Query: 89 INDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQ 148 + D AR EA R+ + G DP A ++R+ + Sbjct: 62 SDVLSYDAARQEALRVLGEVQKGADPTAAIK-----------QARQEGPLSEELVNWFDS 110 Query: 149 ELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDY 208 + KT R ++ + +L + S +T Sbjct: 111 HTMKDSTRKTWRSVVNNHL-------------------------IPALGSRKPSTITKAD 145 Query: 209 IAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPV-SAS 267 I A + A +L F + A D+ K + + Sbjct: 146 ILAAYRDIQAKSGRQANQAIIILSTFYN-------RTTDGKFNPASDFRNDKSIRKHRDA 198 Query: 268 KADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI 327 + + L ++Q+++ + ++ ++L TGAR EI +LRW V+ ++ + Sbjct: 199 EREVVLSQDQVRALLADFDKSPAQQSADAARLLFYTGARIGEILALRWDAVNLTQGTITL 258 Query: 328 KDKIEGE---RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRA 384 + E + + L+P +L + + +VF + ++ A Sbjct: 259 AHTMTKEAKAKTLHLSPRAQAILE---RRQEEALEGAEYVFPGRDGEAHQVVIKAFWKAA 315 Query: 385 LVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWH 444 + + +H +R ++ T+ V + MGH + + Y R D + Sbjct: 316 CKRCGIEGVHIHDIRATYSTILIASGESAKAVGKTMGHADTKTTMR-YERIAQDRAKDIA 374 Query: 445 EKIET 449 K++ Sbjct: 375 SKVDD 379 >UniRef50_Q0I4F8 Integrase n=1 Tax=Haemophilus somnus 129PT RepID=Q0I4F8_HAES1 Length = 413 Score = 260 bits (665), Expect = 7e-68, Method: Composition-based stats. Identities = 68/437 (15%), Positives = 141/437 (32%), Gaps = 51/437 (11%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVF-QSVYAGKTLR 83 MA + T ++ K L D L ++G+K + F K Sbjct: 1 MARQIIQLTNTKI--LNAKPKDKDYTLSDG--QGLYLLVKSNGSKLWRFNYYDLLKKRKL 56 Query: 84 MTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAW 143 +++G+ + + DAR + + L+ I+P+ + +A Q T Sbjct: 57 ISLGSYPETSLLDARTKRDEYRALLAKDIEPQDYIFKQKEQAIFNQ------CNTLIGVA 110 Query: 144 EDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSE 203 +D+ + + + A T + L N+P+S+ Sbjct: 111 KDWREMKSSKVEADTMKDQWR----------------------LLELHLFPHLGNMPISD 148 Query: 204 LTPDYIAAWLSTERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMV 262 +T + L ++ + R L ++++ Q +L + + Sbjct: 149 ITAPFTRMKLQKLADDKKFEMLKKVIRGLNEIMRFAVNAGLIQFNPTANLQE------LF 202 Query: 263 PVSASKADDCLQKEQLKSWFSAVRSLNNP-IASAYLQVLLLTGARREEIASLRWSDVDFK 321 P + + ++L + +V N L+ LLT R E A W ++DF+ Sbjct: 203 PSGEVQHRPSIHPDKLPKFLESVNKANIQLQTRCLLEWQLLTMVRPSEAAGTMWREIDFE 262 Query: 322 WSSMRIK---DK-IEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEP 377 + I K + ++PL+ +LN++ +VF N + Sbjct: 263 NKTWLIPKDRMKGKKRSHLVPLSQQAINILNIMR----PITGNCDFVFPKNGDLTTNMSS 318 Query: 378 RSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPL 437 + + + + HG R T E I+ ++ H Y R Sbjct: 319 ETINKALRKMGYQGILCAHGFRSIASTALNENEFNVEIIEALLSHVKGDKVRTAYDRSTY 378 Query: 438 D-LLRKWHEKIETWILN 453 + R++ E ++ Sbjct: 379 EKQKRQYIEWWGNFVEK 395 >UniRef50_Q0BEM8 Phage integrase family protein n=4 Tax=Burkholderia ambifaria RepID=Q0BEM8_BURCM Length = 414 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 71/431 (16%), Positives = 143/431 (33%), Gaps = 52/431 (12%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNI 89 T ++R+ G K T L D + L SG+K + ++ AGK IG Sbjct: 1 MPLTDIKIRQAKA--GNKPTKLTDGN--GLYLLVKPSGSKLWRYKYRIAGKENVFAIGEY 56 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 + AR + L+ G+ P A+ E L A + K TF +++L++ Sbjct: 57 PTTSLQAARVARDDARELVKKGLHPSHARQ------EVLSARINEGKATFRAVSDEWLEK 110 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 R + + AD + N P+ +T + Sbjct: 111 KRKTWTERHFGEILRMLEAD----------------------AYPYIGNRPMRSITAHDV 148 Query: 210 AAWLSTERQNR-PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 A + + P+V + + +++ + +R V ++ Sbjct: 149 LALMRRVEKRGSPSVAIKLRQYVSNVFQYAVITLRADTDPAS------VLRGAVLKPPTE 202 Query: 269 ADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIK 328 L +E+LK+ F + + + +++L++ R E+ RW ++D + R+ Sbjct: 203 HARPLSREELKALFRQLPLYKSKRTTIAIRLLMMLFPRTVELCRARWEEIDLAAAEWRVP 262 Query: 329 D---KIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFR--SNSKSGKIIEPRSAHNR 383 K I+PL LL L + G++ +++ + + + Sbjct: 263 PEKIKSRRLHIVPLPTQAISLLRELQEIH----GNRGYILPILHSNRKRPHMSRATINRA 318 Query: 384 ALVLA--ELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRR-PLDLL 440 + I+ H R + T + +V + HK Y L Sbjct: 319 LDSMMPNNPEPITGHDFRATASTNLHEMGWKDEVVEMQLSHKDKDRTRSTYNHAKYLPER 378 Query: 441 RKWHEKIETWI 451 R+ + W+ Sbjct: 379 REMMQSWADWL 389 >UniRef50_B0C8U1 Phage integrase family protein n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C8U1_ACAM1 Length = 399 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 69/434 (15%), Positives = 142/434 (32%), Gaps = 46/434 (10%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAGKTLRMTI 86 ++ + T ++R L D L + T G K + ++ GK +I Sbjct: 1 MATNRLTDLQVRNAK--PKTGSYRLSDGG--GLFLQITPAGGKHWKYRYRIQGKESTFSI 56 Query: 87 GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDY 146 G+ + + +ARA+ + L+ G++P + Q TF +++ Sbjct: 57 GSYPELGLGEARAKHLEARRLVAQGLNPTTEAKRLQLSLQLAQ------GNTFEFVADEW 110 Query: 147 LQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTP 206 + G S + R D SL P++E+T Sbjct: 111 FSQKNAGWSESYRGIVRNRLNRD----------------------LNPSLGPRPVTEITA 148 Query: 207 DYIAAWLSTERQNRPTVTAHA-YRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVS 265 + A + AH ++R + ++ + + DL PV Sbjct: 149 PEVLAVIRAVEARGANALAHKCLSIVRMVLGYAVATGRCDRNVVNDLGGALA-----PVD 203 Query: 266 ASKADDCLQKEQLKSWFSAVRSLNNPI-ASAYLQVLLLTGARREEIASLRWSDVDFKWSS 324 A +++ + + A +++ LT R E+ +++WS +++ Sbjct: 204 AKHRAAITDPKRVGELMRMIADYRGSMVVRAAMRMGALTFVRPGELRTMQWSQINWNTKE 263 Query: 325 MRIKDKIEG-ERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNR 383 R + + I+PL E+L L +VF S + + + + Sbjct: 264 WRFQVSKTETDHIVPLATQAIEILQTLQLITG--NGTSRYVFPSANSMTRHMSNNAVLAA 321 Query: 384 ALVLAELPH-ISLHGLRRSFGTL-AEWVEVPTGIVAQIMGHKPSALAEKHYRR-RPLDLL 440 + +S HG R TL AE + ++ + H + Y R L+ Sbjct: 322 LRAMGITKDEMSGHGFRAMARTLIAEELHYRPELIEHQLAHAVRGPLGRAYNRTEFLEER 381 Query: 441 RKWHEKIETWILNE 454 R+ + ++ Sbjct: 382 REMMQAWADYLDEL 395 >UniRef50_Q7MPT5 Site-specific recombinase, phage integrase family n=14 Tax=Gammaproteobacteria RepID=Q7MPT5_VIBVY Length = 434 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 76/473 (16%), Positives = 148/473 (31%), Gaps = 72/473 (15%) Query: 13 HYCKTAILNWSRKMALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFV 72 HYC L++ ++ K T +++ ++ + KK D + R G+ ++ Sbjct: 5 HYCP---LHYFSNYGVNMGKLTAKQVIAYSKADPKK---YSDGEGLYFCVR-KQGSPYWM 57 Query: 73 FQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAES 132 + A T+G + DAR A + + GIDP + K Sbjct: 58 IRYTTAKGRREATLGQFPLMSLADARIAAAYFRKEVRDGIDPLLEKQKI----------E 107 Query: 133 RKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGP 192 T + D+ + SR + K + Sbjct: 108 LPDIETVDQLFHDW-----------------------YRTDLSRRLKHPKIPYRVYTKDI 144 Query: 193 LASLLNLPLSELTPDYIAAWLSTERQ-NRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGD 251 + ++E+T + L R+ NRPT+ ++ + + + Sbjct: 145 SPVIGIKCIAEVTARDVREVLERIRESNRPTIANDTLMYMKQLFRHAIKLDLTLN----N 200 Query: 252 LAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASA---YLQVLLLTGARRE 308 A + V S D L KE++ FS + N + L+ G R+ Sbjct: 201 PAAAFTVDDA-GGVESSKDRMLSKEEIHYAFSVFHTHINSFGRDNYLACCLFLVLGVRKS 259 Query: 309 EIASLRWSDVDFKWSSMRIKD---KIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVF 365 E+ W ++D + K IPL N L +VF Sbjct: 260 ELCEAMWREMDLTTGVWDLPKERSKTGVPISIPLPRQAIAWFNELQIRA----CGSPYVF 315 Query: 366 RSNSKSGKI-IEPRSAHNRALV---------------LAELPHISLHGLRRSFGTLAEWV 409 + S + + P + + + +L H ++H LRR+F +LA + Sbjct: 316 PARRASHRPHMGPDTLNRAISKLFGREPGRKKQPPNKMGKLEHFTVHDLRRTFRSLAASL 375 Query: 410 EVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWILNEAGITIKNN 462 + + + + HK + + R + R H+ + + + Sbjct: 376 GIAGNVAERCLNHKLKGVEGIYDRHDYFEERRIAHQTVADVVEPLVNFEPASQ 428 >UniRef50_Q3A6E0 Site-specific recombinase/integrase n=3 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A6E0_PELCD Length = 482 Score = 259 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 71/440 (16%), Positives = 139/440 (31%), Gaps = 56/440 (12%) Query: 24 RKMALS--RQKFTFERLRRFT---LPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVY 77 R MA + T + + + + L G K ++F+ Sbjct: 85 RTMANTNRSIPLTKKAIDGLPSHDPAGTQATATEYSTGEPGLHICVNMRGNKRWLFRYRL 144 Query: 78 AGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKV 137 G+ + IG + A+ A +Q + G E +K + Sbjct: 145 YGRKKVVAIGPYPSIEPPLAKQMANEMQRNLALG------------ERVVSPRAQQKQQK 192 Query: 138 TFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLL 197 TF YL+ + TK+ + Y + + Sbjct: 193 TFGEFARKYLEHAKQ-----TKKSWKDDYNK-------------------LTNQIIPKWG 228 Query: 198 NLPLSELTPDYIAAWLSTERQNRPTV-TAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDY 256 +PL+ LTP I +L+ + Y +L + + D ++ Sbjct: 229 EVPLTCLTPKEIQGYLNQVKARTSGTNANRHYAVLNVLYNLAVKWGEI------DPWKNP 282 Query: 257 NVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWS 316 L E+ K + +A+ +A+ L++LL TG R E+ +W Sbjct: 283 MPGVSKFRDNPGRTRYLSMEECKRFLAALEEAPGQLAACALRLLLFTGCRAGEVLKSKWE 342 Query: 317 DVDFKWSSMRIKDKIEGE-RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKII 375 DV + +M + + G+ R++ L + L N ++F +S+ + Sbjct: 343 DVSMEGRTMLLPETKNGKSRVVHLNSLSLAEIEKLKDFRNPS---NPYLFPGSSEDKPLG 399 Query: 376 EPRSAHNRALVLAEL--PHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYR 433 R AL LA L + +H LR + +L + + +GH + E+ Y Sbjct: 400 TVRKTFEHALKLAGLQGTDVVIHTLRHTHASLLANLGESLETIKVSLGHSSVKMTER-YA 458 Query: 434 RRPLDLLRKWHEKIETWILN 453 + + + + Sbjct: 459 HISGSKTKDASDHLAEQLKE 478 >UniRef50_A7ICY0 Integrase family protein n=14 Tax=Alphaproteobacteria RepID=A7ICY0_XANP2 Length = 452 Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats. Identities = 85/457 (18%), Positives = 147/457 (32%), Gaps = 67/457 (14%) Query: 32 KFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNIN 90 K T + G K +WD ++ R TSG +++V Q AG++ R TIG Sbjct: 3 KLTKRAVDAAEA--GAKDYVIWDDELPGFGLRVFTSGKRSYVLQYRSAGRSRRFTIGLHG 60 Query: 91 DWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQEL 150 W + AR EA+ I G DP + + + +T + YL +L Sbjct: 61 VWTPERARQEAKAQLGRIAQGDDPAEERLLD------------RKALTVKELCDLYLADL 108 Query: 151 RTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIA 210 + G+ + + G + L + + +LT I Sbjct: 109 QAGLILGK-------------GGRPKKPGTIASDLGRIHRHIVPLLGSRRVRDLTKADIT 155 Query: 211 AWLSTER-------------------QNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGD 251 + + LL + ++ + Sbjct: 156 RAMKDIMAGKTRISVMTKNLRGRSIVRGGAGTATRTIGLLGGILTYAVEAGIIE------ 209 Query: 252 LAQDYNVRKMVPVSASKADDCLQKEQ---LKSWFS-AVRSLNNPIASAYLQVLLLTGARR 307 + + L + + L A ++ N ++ ++ + LTG RR Sbjct: 210 ---TNPAHGVRRPKDNVRARRLSEAEYRVLGDLLKTASKNENYRMSVEIIRQIALTGCRR 266 Query: 308 EEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRS 367 E+ +LRW + D S +R+KD EG I P+ V E L +VF Sbjct: 267 MEMVTLRWDEADTDCSCLRLKDSKEGSSIRPIGLPVVEYLERRRNEAI-----GDYVFPG 321 Query: 368 NSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSAL 427 + + + L IS H LR SF ++A + +A ++GH ++ Sbjct: 322 RGGENAFGSFPNHWGKIFANSPLADISPHVLRHSFASVANDLGFTEVTIAALVGHAKGSV 381 Query: 428 AEKHYRRRPLDLLRKWHEKIETWILNEA-GITIKNNV 463 Y L + I +I GI K Sbjct: 382 TSN-YIHTLDTALIMAADTISGYIQGLLDGIEFKQTA 417 >UniRef50_B0RRY6 Complete genome, strain B100 n=3 Tax=Proteobacteria RepID=B0RRY6_XANCB Length = 409 Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats. Identities = 70/444 (15%), Positives = 140/444 (31%), Gaps = 49/444 (11%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSV--YAGKTLRMTIGN 88 T +RR L D + L R GA+ + + GK ++ G Sbjct: 1 MPLTDTAIRRAK--PAATPQKLRDGNGLYLLLR-PDGARWWRYDYRRPVTGKRNTLSFGT 57 Query: 89 INDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQ 148 + + DAR + L+ IDP + A E+ +F V ++ Sbjct: 58 YPEVSLADARERLAEARRLVAAKIDPGEQRKAVKAAGEAA------AANSFEVVAREWFA 111 Query: 149 ELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDY 208 + + S + R +D + + P++ +T Sbjct: 112 KQQKEWSPQYAEKIIRRLQSD----------------------IFPWIGSSPIAAITAPE 149 Query: 209 IAAWLSTERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSAS 267 + L Q A + A +++ + + G L + +P +A+ Sbjct: 150 LLKHLERIEQRGAIETAHRALQTCGAVFRYAVRTGRAEADPTGALKGALTPWRSMPFAAA 209 Query: 268 KADDCLQKEQLKSWFSAVR-SLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMR 326 E+ + + S + P+ + L++ L AR E+ +RW+++D R Sbjct: 210 T-----TSEEATTVLRKIDISTSRPVVRSALRLAPLLFARPGELVRMRWTELDLDAGQWR 264 Query: 327 -IKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRAL 385 K + I L+ E+L L + + +VF K + + A Sbjct: 265 YFVTKTKRTHIAALSTQAIEILRDL----HPLTGRGEFVFPGGRDPRKHMSGNAIL-VAA 319 Query: 386 VLAELPHI--SLHGLRRSFGTLAEWVE-VPTGIVAQIMGHKPSALAEKHYRRRPLDLLRK 442 + ++HG R TL + + + HK + + + + LD RK Sbjct: 320 RRCGIEKDESTIHGFRHMASTLLNEMGHWNPDAIESALTHKMPGVRGIYNQAQYLDERRK 379 Query: 443 WHEKIETWILNEAGITIKNNVDMR 466 + + V + Sbjct: 380 MMQSWADNLDTLKADAANKVVPFK 403 >UniRef50_B9R4Q2 Site-specific recombinase, phage integrase family protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R4Q2_9RHOB Length = 434 Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats. Identities = 88/460 (19%), Positives = 155/460 (33%), Gaps = 49/460 (10%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGA-KAFVFQS-VYAGKTLRMT 85 + T + + + L D V L R T K++ + GK +RMT Sbjct: 1 MPTLPLTDQHCKALK--PTATRQELRDTKVPGLILRCTPSNIKSWSLRYADVTGKHVRMT 58 Query: 86 IGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWED 145 IG + DAR A ++ + TG DP K A+A A T +T D Sbjct: 59 IGRYPAVSLSDARTAALQVLAEVSTGKDPVA--DRKAAQAAEKAAREAATALTVEKIGND 116 Query: 146 YLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 Y + G +P + +G + L + +L Sbjct: 117 YFEAAAKGRHRPKGKPKKPSTL--------------GYERGYFDSFVLPKFGKSAIGDLH 162 Query: 206 PDYIAAWLSTERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPV 264 + ++ + + + ++LR ++ +Q +I + + Sbjct: 163 RRAVQTFIDGLADDHNLSTGVQSLKVLRQICAYAE----FQELISANPCRFVEATDY--- 215 Query: 265 SASKADDCLQKEQLKSWFSAVRS----LNNPIASAYLQVLLLTGARREEIASLRWSDVDF 320 + L +LK+ + A+ + +NP A+ +++ T RR E+A S++DF Sbjct: 216 --DSRERVLTDAELKAIWKALENPYAIASNPQAAIAVRICAATAQRRAEVAKAELSELDF 273 Query: 321 KWSSMRIKD---KIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKII-- 375 + + K I+PL+ +LL + D K VF G + Sbjct: 274 DNAIWTMPGSRRKNGRTHIVPLSDLAVQLLRAAIAL-HEDGYKGAAVFPPLRGEGAAMAV 332 Query: 376 -EPRSAHNRALVLAELPHISLHGLRRSFGTLA--EWVEVPTGIVAQIMGHKPS----ALA 428 A A + LH LRR+ T E + + V+ +GH A Sbjct: 333 ENLTRCFAAAAEAAGVKDTRLHDLRRTAATNMTGERLTIARSTVSLCLGHDDGANAAAAT 392 Query: 429 EKHYRRRPLDLLRKWHEKIETWILNEAGITI--KNNVDMR 466 + R L R+ + +L G T N V +R Sbjct: 393 RVYDRYGYLPEKRRALTAWASLLLEIVGETEALGNVVALR 432 >UniRef50_C6RKK3 Phage integrase n=3 Tax=Acinetobacter RepID=C6RKK3_ACIRA Length = 426 Score = 257 bits (658), Expect = 5e-67, Method: Composition-based stats. Identities = 69/460 (15%), Positives = 144/460 (31%), Gaps = 65/460 (14%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGK----- 80 M ++ + + + V L ++ ++ ++V + Sbjct: 1 MPKKSKELSALSVAKIKNTGR-----HSVGGVDGLCLNVEGNSRVWILRAVVGKRLDKDG 55 Query: 81 -----TLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKT 135 + IG + + +ARA+A L+ I +GIDP K ++ + + + Sbjct: 56 KLKPHRRDIGIGPYPEVSLAEARAKATELRLQIRSGIDPIAHKQEQLEKLYVQKLRDK-- 113 Query: 136 KVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLAS 195 TF + + + + T + + + Sbjct: 114 --TFMECAKVVIANKTRELKNEKHIGQWTSTLETY---------------------IYPT 150 Query: 196 LLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQD 255 L ++ + +T IA L + + ++ ++G P + + Sbjct: 151 LGDISIGTITKVDIAEVLRPIWIKKNETAKRIRGRIETIFDYAKAMGYFEGDNPAEWKGN 210 Query: 256 YNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRW 315 S+ L EQ+ + +R I+ L+ +LT R EI +W Sbjct: 211 LEPIFGNIKQESRPHPSLPYEQVAGFIQHLRQKKG-ISPKALEFAILTACRSGEIFGAKW 269 Query: 316 SDVDFKWSSMRIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSG 372 ++DFK I K E +PL+ LL + + + ++F + Sbjct: 270 QEIDFKNKVWIIPKERMKANKEHRVPLSQEAVNLLKSIQEYTQP----QDFIFPAPRNGA 325 Query: 373 KIIE------PRSAHNRALVLAELPH--------ISLHGLRRSFGTL-AEWVEVPTGIVA 417 + + + H + L L + I+ HG R +F A+ + P + Sbjct: 326 MLSDMSLTILIKRMHEQKLKENGLGYIDPKQNRVITTHGFRSTFRDWSADKTDYPREVCE 385 Query: 418 QIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWILNEAGI 457 ++ HK E Y R RK + W + Sbjct: 386 HVLAHKLPDEVEAAYLRGAYLEKRKGL--MADWAEFCSAN 423 >UniRef50_A7ZQ61 Phage integrase family protein n=32 Tax=Gammaproteobacteria RepID=A7ZQ61_ECO24 Length = 436 Score = 257 bits (657), Expect = 7e-67, Method: Composition-based stats. Identities = 73/447 (16%), Positives = 150/447 (33%), Gaps = 55/447 (12%) Query: 23 SRKMALSRQ--KFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS----GAKAFVFQSV 76 SR +++ K T ++ +K+ L+D D L R G K + F+ Sbjct: 23 SRVPNMAKIAKKLTDTEIKSTK--PAEKEVNLFDGD--GLLLRIAPLAKGGKKNWYFRYA 78 Query: 77 Y--AGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRK 134 K ++++G + ARA +L+ GIDP ++ + A Sbjct: 79 VPVTKKRTKVSLGTYPHLTLAKARALRDEYLSLLTNGIDP------QVHNNQKANALKDA 132 Query: 135 TKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLA 194 T+ TF + +L E + S + + Sbjct: 133 TEHTFQAVAKKWLDEK--------------------VKTSGISQDHANDIWRSLERNIFS 172 Query: 195 SLLNLPLSELTPDYIAAWLSTERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLA 253 +L + P+ E+ P + L + L +++ ++ +I + A Sbjct: 173 TLGDTPIKEIRPKMLKQHLEPIEKRGVLETLRRIISRLNEIFRYAATEE----LIEFNPA 228 Query: 254 QDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPI-ASAYLQVLLLTGARREEIAS 312 + R P + L +L + A+ + + + ++ LLT R E Sbjct: 229 DNLGQRFSKPKKQN--MPALPPSELPRFLVALNNASIRLETRLLIEWQLLTWVRPGEAVR 286 Query: 313 LRWSDVDFKWSSMRIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNS 369 RWSD+D + I K++ +PL+ +L+++ WVF S Sbjct: 287 TRWSDIDIETGMWNIPAEFMKMKKPHKVPLSKEALRVLDLMK----VISGHREWVFPSIK 342 Query: 370 KSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVE-VPTGIVAQIMGHKPSA-L 427 + ++A+ + + + HG+R T AE T ++ + H + Sbjct: 343 APLNHMHEQTANAAIIRMGFGGELVAHGMRSIARTAAEESGKFRTDVLEAALAHSKKDEI 402 Query: 428 AEKHYRRRPLDLLRKWHEKIETWILNE 454 + R L + ++ ++ Sbjct: 403 IAAYNRAEYLTERVVLMQWWSDYVSSQ 429 >UniRef50_A6F6W3 Putative uncharacterized protein n=1 Tax=Moritella sp. PE36 RepID=A6F6W3_9GAMM Length = 401 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 76/448 (16%), Positives = 157/448 (35%), Gaps = 67/448 (14%) Query: 23 SRKMALSRQKFTFERLRRFT---LPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYA 78 + + + KFT L+ + + + D ++ L C + G K F+ + + Sbjct: 5 NPTITTKKFKFTNTNLKSLPSNQVNSSSTELEVSDTEIIGLKCLSGKTGNKRFLLRYKFN 64 Query: 79 GKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVT 138 G+ +TIG D I+ AR AR+ + +I G+DP+ + ++ T Sbjct: 65 GRKCSITIGRFPDIDINQARKVARKYKGMIADGVDPKAERDNQV------------DYPT 112 Query: 139 FSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLN 198 + ++ L+ R ++ + +S+ N Sbjct: 113 VKSFF-----------------------YDTYLPLAKRRKKTWGIDEKRFRKHC-SSISN 148 Query: 199 LPLSELTPDYIAAWLSTERQNR-------PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGD 251 + +ELT ++ T + + P LL+ K ++ Sbjct: 149 IKYNELTVSHVMKLHLTLSETKYKGEYYAPATCNRVLALLKTMGKLAHSMLDVD------ 202 Query: 252 LAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIA 311 + R + + ++ K R+ P ++ +L L G R E+ Sbjct: 203 ---NVADRVSLLPENNARTRYCDIDETKRIIKVARAYPKPSIGNFIALLHLIGCREGELR 259 Query: 312 SLRWSDVDFKWSSMRIKDKIEGE-RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSK 370 SD++F+ ++ I G II L+ + E+L + + + +VF + K Sbjct: 260 FRVHSDINFEKRTLTIPRTKNGTYHIIYLSDLMIEILQSIPKI-----SGNNFVFPAPHK 314 Query: 371 SGKIIE-PRSAHNRALVLAELPH---ISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSA 426 GK I PR + + +A + + + LH R S + V V +++ HK + Sbjct: 315 KGKPIGAPRYSFDIIKQMAGIENPDEVLLHTARHSVASNLISNGVDISSVQKLLNHKDIS 374 Query: 427 LAEKHYRRRPLDLLRKWHEKIETWILNE 454 + Y + R+ I + + Sbjct: 375 STLR-YAKLSEGKQRETASMISSMVEEL 401 >UniRef50_A7JSX8 Bacteriophage integrase n=3 Tax=Pasteurellaceae RepID=A7JSX8_PASHA Length = 413 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 68/448 (15%), Positives = 143/448 (31%), Gaps = 57/448 (12%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA---TSGAKAFVFQSVYAGKTL 82 MA + + ++ K+ L D D L R G+K ++F Sbjct: 1 MARTTKALNKTQIENAK--SKDKEYILSDGD--GLNLRVKPLPKGSKIWIFNYTNPQTKN 56 Query: 83 R--MTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFS 140 R +TIG + +AR ++LI+ GIDP+ K EAE + TF Sbjct: 57 RTNLTIGRYPLITLAEARTICDGYRSLIEKGIDPQEEKKRLQQEAE------NRVNDTFR 110 Query: 141 VAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLP 200 E Y + + ++++ + + Sbjct: 111 NVAESYFNGIYKEKAKNPI--------------------TREKNWIRLENHIFPYIGDKH 150 Query: 201 LSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRK 260 + E+ + S ++L+ A + + Q + +++ ++ Sbjct: 151 VEEIKVKALVDIYSKVADKSN-TLKKLHQLVSAVMDHAITQGIIESHNCRLAVKNFYIKP 209 Query: 261 MVPVSASKADDCLQKEQLKSWFSAVRSLN-NPIASAYLQVLLLTGARREEIASLRWSDVD 319 P ++ E+L F+ + + + A + LT R E + W ++D Sbjct: 210 STPNP------TIELEELPQLFTDLHNAKLSKQTYALVCWSFLTALRPNEAVNAEWKEID 263 Query: 320 FKWSSMRIKDKI-------EGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSG 372 F+ I + + +PL+ ++L ++ NS +VF S + Sbjct: 264 FEKKLWNIPKEKMKGKADKKRPHSVPLSSQALKILEMMKMHSNS----SPFVFPGRSSNS 319 Query: 373 KIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSA---LAE 429 K + + ++ ++ HG+R T +V + I+ H L Sbjct: 320 KPMSNATVNSTLKRNGYKDRLTAHGIRAFVKTFLSSRKVDRHVSESILSHLLEGGDDLEN 379 Query: 430 KHYRRRPLDLLRKWHEKIETWILNEAGI 457 + R L+ + + + Sbjct: 380 TYNRYDFLEERVPVMQLLGDYCEQCGMN 407 >UniRef50_Q74H29 Integrative genetic element Gsu32, integrase n=1 Tax=Geobacter sulfurreducens RepID=Q74H29_GEOSL Length = 439 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 70/476 (14%), Positives = 148/476 (31%), Gaps = 84/476 (17%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRM 84 MA KF+ + LR +K + + D R SGA++F + + GK + Sbjct: 1 MARQSTKFSDKFLRALK--PQEKPYDIREGD--GFGVRVFPSGARSFFYMYHFDGKRRFL 56 Query: 85 TIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWE 144 +G + DAR + R + GIDP A + R+ +T + + Sbjct: 57 NLGKYPQLSLADARQKHRDAVSQHAKGIDPLAATQEQK--------RERREAITVADLID 108 Query: 145 DYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSEL 204 +Y++ + R ++ L ++ Sbjct: 109 EYVKNWAKVYKVERSATEDERALSK---------------------DVLPYWGKRKAKDI 147 Query: 205 TPDYIAAWLSTERQNR-PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVP 263 A L + P + ++ R +++ +K + +++ Sbjct: 148 KRTDAIALLERIVRRGSPGQARNILKVGRKMYEFAIERKYVEANPFSRISKAVPATMP-- 205 Query: 264 VSASKADDCLQKEQLKSWFSAVR-SLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKW 322 L + ++K +SA+ S + L+++L+T R E+ + ++D +W Sbjct: 206 ---RTRSRVLTESEIKYIWSAIDKSAGSDETKRALKLILVTAQRPGEVIGMHRREIDGEW 262 Query: 323 SSM---RIKDKIEG---------ERIIPLTPYVSELL----------------------- 347 ++ RIK + + + L+P EL+ Sbjct: 263 WTIPPERIKTEKDRTRSNSVGPQPHRVYLSPLALELIGDKDGYIFESPRGGAMDSKALSH 322 Query: 348 --NVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRAL------VLAELPHISLHGLR 399 + P + EG VF + + L + H LR Sbjct: 323 VVHAAPLVPELVRDTEGHVFAGPCGPVAAKALMQLLEKEIAYPDKEKYYGLTRWTPHDLR 382 Query: 400 RSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWILNEA 455 R+ T + +PT +++ H + + + R + K ++ Sbjct: 383 RTARTRMSAINIPTRHAERVLNHTLPGIQKTYDLYRYDPQKKAALTKWAAYLEELL 438 >UniRef50_B1Y4T5 Integrase family protein n=3 Tax=Betaproteobacteria RepID=B1Y4T5_LEPCP Length = 427 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 58/422 (13%), Positives = 123/422 (29%), Gaps = 53/422 (12%) Query: 33 FTFERLRRFTLPEGKKQTFLWDADVTTLACRA-------TSGAKAFVFQSVYAGKTLRMT 85 T R PEG+ L DA L SG+K + ++ + GK + Sbjct: 2 LTDTECRNAKCPEGRAFVRLADAG--GLYLEVKPPGAKTPSGSKLWRWKYRHGGKEKLLA 59 Query: 86 IGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWED 145 IG + AR E + + L+D G DP A+ E+ A+ + + +F Sbjct: 60 IGAYPAVSVAGARREQAKARALLDAGTDPGEARK------EAKYAKLNEHETSFEAVARQ 113 Query: 146 YLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 + + + + R D + P++ LT Sbjct: 114 WWAGWKANKTERYAEYVLRRLELD----------------------AFPVIGAKPVAGLT 151 Query: 206 PDYIAAWLSTERQNR-PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPV 264 + ++W+ + + D ++ Sbjct: 152 APDFVRMAKKIEARGVGELARRIMETSGQVMRWAVAHGLTE----RNPTADVKPGDILKP 207 Query: 265 SASKADDCLQKEQLKSWFSAVRSLNNPI-ASAYLQVLLLTGARREEIASLRWSDVDFKWS 323 + + +L + + + + LQ++ LT R E+ +W + D + Sbjct: 208 RTVENFARVGAAELPDLMRHINAYDGSVFTRLALQLMALTFVRTSELIGAQWQEFDLDAA 267 Query: 324 SMRIK----DKIEGE-----RIIPLTPYVSELLNVLAQSPNSDVNKEG-WVFRSNSKSGK 373 I + + ++PL P +L +L + +D + +F + Sbjct: 268 EWTIPPDRIGRKGRQGERRAHLVPLAPQALAVLRLLQSARGADRCRGPALLFPGERDHER 327 Query: 374 IIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYR 433 + + + ++ HG R T + ++ + H Y Sbjct: 328 PMSNNTMLKALERMGYKGKMTGHGFRGIASTALNEMGFRFDVIEAQLSHIEGNRVRAAYN 387 Query: 434 RR 435 Sbjct: 388 HA 389 >UniRef50_B0KFC6 Integrase family protein n=5 Tax=Pseudomonas putida RepID=B0KFC6_PSEPG Length = 436 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 87/455 (19%), Positives = 164/455 (36%), Gaps = 52/455 (11%) Query: 25 KMALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-------SGAKAFVFQSVY 77 K RQK + +R T D DV L + S ++ + + Sbjct: 19 KPPPFRQKLSDAFIRSLTTSGK-----YADGDVPGLYLQVRASLKPGKSPSRHWRLKYRL 73 Query: 78 AGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKV 137 GK IG D + +AR AR + + IDP AK KI +A Sbjct: 74 RGKENVYVIGRYPDVGLKEARELARAARNSVANHIDPLKAKKAKIEAQWLNEAR------ 127 Query: 138 TFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLL 197 TF+ E++++ + +K+ + +G L ++ Sbjct: 128 TFAYVAEEWMKFKSADLVSKSVAGF----------------------RGALQNHILPAIG 165 Query: 198 NLPLSELTPDYIAAWLSTER-QNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDY 256 P+SE+ ++I A ++ R + + ++R+ + ++ + + + ++ Sbjct: 166 ERPVSEIKLEHITAIITELRYKRIMAMARRVRTIIRSILGFAEGRGWVERNVALSNTEEL 225 Query: 257 NVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWS 316 +R +V S + L + + LN + +++L+L R E+ +RW Sbjct: 226 KIRHVV-TSNPAIER---PADLGKFLLRLDDLNLGSVAYAMRLLVLLPVRPGELVKMRWE 281 Query: 317 DVDF---KWSSMRIKDKI--EGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKS 371 DVD W + K K + + I+PL LL L + D GWVF S Sbjct: 282 DVDLIGADWRYVVSKTKHLDKSKHIVPLPEQALVLLRELHKDRVVDDAGNGWVFGSPVYP 341 Query: 372 GKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEW-VEVPTGIVAQIMGHKPSALAEK 430 G+ I+ S + I+ HG R ++ T+A + + ++ + H+ Sbjct: 342 GRSIDATSILKSLQKVWPEYAITAHGFRATYRTIAHEHLGIDPIVLELSLSHRMPGALGA 401 Query: 431 HYRRRP-LDLLRKWHEKIETWILNEAGITIKNNVD 464 Y R L R+ + ++ T D Sbjct: 402 VYARAQLLSQRREAAQLWANYLDQLRNNTKLALAD 436 >UniRef50_D0CWC5 Phage integrase family protein n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CWC5_9RHOB Length = 417 Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 79/456 (17%), Positives = 144/456 (31%), Gaps = 62/456 (13%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTI 86 ++R T + + + + + D + L SGAK++ + +AG+ ++T+ Sbjct: 1 MAR-ALTTKSVEAVK--PEQNRREIPDPALAGLYLVVQPSGAKSWALRYRFAGRPKKLTL 57 Query: 87 GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDY 146 G + DARA A ++ G DP AK A Q R T Sbjct: 58 GKWPIMGVADARAAASEAIEALEHGNDPSAAKKKAKAARIEAQLSERDKVKTL------- 110 Query: 147 LQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTP 206 + + S + L + + E+T Sbjct: 111 --------------------LEQYAKRHLSKLRSGSEVKRRLETEFLPRYGDHDIHEVTK 150 Query: 207 DYIAAWLSTERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVS 265 I L + T L F W + IP Q Sbjct: 151 RDILELLEKIADSGRITTANRMRLYLSGFFNWCLERD----AIPISPVQGVKPV----AK 202 Query: 266 ASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSM 325 D L ++++ ++ A P Q LLLTG R E+ + ++ + Sbjct: 203 EKSRDRVLNDDEIRWFWKACERAGYPW-RQAGQTLLLTGQRLNEVLGMTDDELHGDAWHL 261 Query: 326 RI-KDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRA 384 + K E ++PL+ ++L+ + + + +F + ++ I A NR Sbjct: 262 SAQRTKNGREHLVPLSQAARDVLSSVERIESP----SRLLFTTTGRT-PICGHFKARNRL 316 Query: 385 LV------------LAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKP---SALAE 429 E+PH + H LRR+ T + +P + ++ H + Sbjct: 317 SRFMAEIAEAETGEAIEIPHWTFHDLRRTAATGMARLGIPVRVTEAVLNHVSGTGGGIVA 376 Query: 430 KHYRRRPLDLLRKWHEKIETWILNEAGITIKNNVDM 465 + R D RK E ++L N V + Sbjct: 377 VYQRHDFADEKRKALEAWARFVLVLVEGGADNVVQI 412 >UniRef50_A1U0R6 Phage integrase family protein n=2 Tax=Gammaproteobacteria RepID=A1U0R6_MARAV Length = 432 Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 78/461 (16%), Positives = 146/461 (31%), Gaps = 60/461 (13%) Query: 28 LSRQK--FTFERLRRFTL-----PEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAG 79 + + + ++R T + V+ L R SG++ ++ ++ Sbjct: 1 MPKIAKELSALEVKRLTCRIDPETGEATEVRYPVGGVSGLLLRITPSGSRQWILRAKVGN 60 Query: 80 KTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTF 139 + M +G + + AR +AR ++ I +GIDP K + Q + +TF Sbjct: 61 RRPDMGLGPYPEISLAQARDKAREMKEKIRSGIDPLEEKRTLKRALLAEQI----STLTF 116 Query: 140 SVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNL 199 A E Y++ + T + + + L L Sbjct: 117 QKAMEKYIKMKAKEFRNPRQEKQWTNSLNTY---------------------AIPHLGKL 155 Query: 200 PLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVR 259 P+ E+ +I L + + + + W P + Sbjct: 156 PVREIDLPHIKQVLDPIWETKTETANRVRARIENILGWCAIHGYRSAENPARWQGYLDEV 215 Query: 260 KMVPVSASKADDC--LQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEI------- 310 P K L + + + ++ A L+ L+LT +R E+ Sbjct: 216 YPSPEKIKKRGHFAALPVDDMPEFMRDLKKRTGTAAR-ALEFLILTASRTNEVIGDKRIG 274 Query: 311 -ASLRWSDVDFKWSSMRIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFR 366 A + W ++D + K E +PLT ELL + + + E +F Sbjct: 275 KAGVTWQEIDLARKVWTVPADRMKSEKIHRVPLTDSAIELLKGM-----GEGSPEDLIFP 329 Query: 367 SNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQI-MGHKPS 425 + L E P I+ HG R +F A V+++ + H S Sbjct: 330 GPKGGIP---SNNFLTALLKRMERP-ITAHGFRSTFKDWARERTAYADEVSELALAHVNS 385 Query: 426 ALAEKHYRRRPL-DLLRKWHEKIETWILNEAGITIKNNVDM 465 Y R L D R E + ++ G T K + + Sbjct: 386 DATRAAYARSELIDKRRLMMADWEQFCMH--GETKKESGKV 424 >UniRef50_C5RZC7 Phage integrase family protein n=1 Tax=Actinobacillus minor NM305 RepID=C5RZC7_9PAST Length = 420 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 70/437 (16%), Positives = 141/437 (32%), Gaps = 47/437 (10%) Query: 21 NWSRKMALSRQKFTFERLRRFT--LPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVY 77 + + KFT + ++ L + + D + L C SG+K F+F+ + Sbjct: 5 HPLSNPKIKPFKFTAQSIKALPQNLSTTSTELEVSDTESKGLKCLVGRSGSKRFLFRYTF 64 Query: 78 AGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKV 137 K + +G D + + R R+ + L+ G++P+ A + + + Sbjct: 65 KNKKCSIALGKFPDISVSEVRNIVRQYRELLCCGVNPKEQLQSNNATGDMNSQSESERVL 124 Query: 138 TFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLL 197 F T + + R + + + + Sbjct: 125 AFQ---------------PMTVSAFFWSVYLPYAKQRKRSWD---KDESRFRLYIEPYIG 166 Query: 198 NLPLSELTPDYIAAWLSTE-------RQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPG 250 + S+L I S R P LL+ ++ + Sbjct: 167 KVIYSDLKALQIYQIQSDMISGNHYPRAFSPATCNRTIALLKTMGNFAYRLEY------- 219 Query: 251 DLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEI 310 ++++ ++ + ++ E++K+ N A + + +LLLTGARR E+ Sbjct: 220 -ISENVALKVPLLKENNQRSRYFSLEEMKALLYHAEFYPNKYAGSLIALLLLTGARRNEL 278 Query: 311 ASLRWSDVDFKWSSMRIKDKIE-GERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNS 369 +W +D + + + R I L+ LN L + ++F Sbjct: 279 QQAKWEYLDVNAQILYVPNTKNGKPREIYLSDEAMYWLNRLER-----DVGNPYIFARKG 333 Query: 370 KSGKIIEPRSAHNRALVLAELPH---ISLHGLRRSFGTLAEWVE-VPTGIVAQIMGHKPS 425 I PR A + L A + I H R S TL V + H Sbjct: 334 SVKPISAPRFALKQLLKKAGITDIDGICFHTARHSVATLLISSGKFNLYDVKAQLAHASI 393 Query: 426 ALAEKHYRRRPLDLLRK 442 +++ Y + + R+ Sbjct: 394 QSSQR-YAKLTENRQRE 409 >UniRef50_Q5E028 Phage family integrase n=2 Tax=Vibrionaceae RepID=Q5E028_VIBF1 Length = 399 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 75/441 (17%), Positives = 143/441 (32%), Gaps = 53/441 (12%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSV--YAGKTL 82 MA + T +++ K+ L D + L R +GAK++ F+ K Sbjct: 1 MARQVIRLTDRKIKSAA--PTGKEFTLSDGE--GLQLRVRPTGAKSWQFKFSDPVTRKIQ 56 Query: 83 RMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVA 142 ++ +G + + +AR++ +TL+ I+P+ + K EA R TF V Sbjct: 57 KIALGPYPELSLANARSKTTEYRTLLAQKINPKSFEQSKELEA------KRVQTSTFIVV 110 Query: 143 WEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLS 202 E + + + +S R + +P++ Sbjct: 111 AEQWFERKKETVSPAH----------------------SYREWRTLEKYIFPHMSKIPVA 148 Query: 203 ELTPDYIAAWLSTERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKM 261 +T L + + + L + +S G+I + + K+ Sbjct: 149 TITAVETIDVLRPLEKEGKYSTVKRICQSLNQIMDYSVNH----GLIHANPLA--KIIKV 202 Query: 262 VPVSASKADDCLQKEQLKSWFSAVRSLNNPIAS--AYLQVLLLTGARREEIASLRWSDVD 319 + ++ EQL + + S + + L T R +E A+ RW D+D Sbjct: 203 FRKNTVLHMPTIRPEQLPDFLKRLHSCSTIQTKTKLLILWQLHTMTRPKEAATTRWIDID 262 Query: 320 FKWSSMRIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIE 376 + I K E IPLT +LN + + +VF + Sbjct: 263 LEKGVWTIPAENMKRRKEHRIPLTSQAINILNQIRLQSK----RCDYVFPGERDINSHVS 318 Query: 377 PRSAHNRALVLAELPH-ISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRR- 434 +A+ L + HGLR T + ++ + H Y R Sbjct: 319 LFTANAAIKRSLGLKDELVAHGLRAIASTALHEYGFDSLLIEACLSHADQNEVRASYNRS 378 Query: 435 RPLDLLRKWHEKIETWILNEA 455 L+ ++ +I A Sbjct: 379 DYLEQRKEIMCWWSNYIDEAA 399 >UniRef50_B9R123 Site-specific recombinase, phage integrase family protein n=3 Tax=Alphaproteobacteria RepID=B9R123_9RHOB Length = 451 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 80/460 (17%), Positives = 151/460 (32%), Gaps = 60/460 (13%) Query: 28 LSRQK--FTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRM 84 + + T ++R + V+ LA + +SG K ++ ++ K + Sbjct: 22 MPKAARELTPLEVKRLKNSGRGGNELHFVGGVSGLAIQLLSSGGKTWILRTTVGYKRRDI 81 Query: 85 TIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWE 144 +G D + AR AR + LI G+DP + ++ + Q ++FS A + Sbjct: 82 GLGGYPDVSLAQARERARETKELIRQGVDPIEHRKSLQSQLVASQMR----GLSFSDAVD 137 Query: 145 DYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSEL 204 YL + + + + + L L + + + Sbjct: 138 RYLSVKSAELRNEKHKEQWASTLQTY---------------------ALPHLGKMLVDNI 176 Query: 205 TPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPV 264 T I L ++ + + A + WS G P A + P Sbjct: 177 TTQDILLVLQPIWTDKTETASRLRGRIEAVLSWSTVSGHRTGENPARWAGNLKELLPSPS 236 Query: 265 SASKADDC--LQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKW 322 +K+ + + + SWF +R L + A+ L+ L L +R E+ WS++D K Sbjct: 237 KIAKSGNWPAIALVEADSWFEGLR-LRDGTAARALEFLALCASRSGEVRKATWSEIDHKQ 295 Query: 323 SSMRIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRS 379 + I K+ + +PL+ + ++F + G + + Sbjct: 296 KTWVIPGERMKVGKDHRVPLSAT-----ALALLDALPKREDSPFIFPAPRG-GPLSD--M 347 Query: 380 AHNRALVLA-------ELPHIS---------LHGLRRSFGTLAEWVEVPTGIVAQIMGHK 423 A + + P HGLR +F A + + H Sbjct: 348 ALSAVMRRMHSVELDNGRPGWRDPRNGHPAVPHGLRSTFRDWAAESGFARDMAEIALSHS 407 Query: 424 PSALAEKHYRRRPLDLLRKWHEKIETWILNEAGITIKNNV 463 + E+ YRR L R+ + W G T N V Sbjct: 408 VGSEVERAYRRSDLIERRRGM--MSAWAEFLRGATASNIV 445 >UniRef50_Q2T3P2 Integrase n=31 Tax=pseudomallei group RepID=Q2T3P2_BURTA Length = 409 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 67/437 (15%), Positives = 130/437 (29%), Gaps = 46/437 (10%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQS-VYAGKTLRMT 85 + + R ++ L D LA +G K + F+ G+ + Sbjct: 1 MPESLLRDLQCRSAK--PRERVYRLSDGG--GLALLVKPNGLKYWQFRYMKPDGREGLIQ 56 Query: 86 IGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWED 145 IG ++ ARA + + G DP + + A + A + + F Sbjct: 57 IGPYPRITLEAARAARNEHRVAVQGGDDPATLRKQEKARRKIDAARA----LNFKQCATA 112 Query: 146 YLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 +++ T ++ + + L +++ Sbjct: 113 FIEARSAEWVNPKHTQQWTNTLSTY---------------------AYPIIGALRPADID 151 Query: 206 PDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVS 265 D + L + + + + + W+ + G P + + P Sbjct: 152 TDLVRKVLEPIWLTKNETASRVRGRIESVLDWAKVRGLRDGENPARWSGHLDQLLAAPGK 211 Query: 266 --ASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWS 323 K L ++ ++ + +R + A L+ +LT R E+ R + D Sbjct: 212 VQKPKHHAALPFTEIGAFVAELRGMVGTAAR-ALEFTILTAMRTGEVIGARHDEFDADAQ 270 Query: 324 SMRIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSA 380 + K + +PL+ ELL L VF + A Sbjct: 271 LWTVPAERMKAKRAHRVPLSSSALELLKTLPT-----SADSPVVFEGMRARRPLSN--MA 323 Query: 381 HNRALVLAELPHISLHGLRRSFGTLAEWVE-VPTGIVAQIMGHKPSALAEKHYRRRPL-D 438 + L + +++HG R +F A +V + H E YRR L D Sbjct: 324 MLQVLERMKRGALTVHGFRSTFRDWAAECTPFSNEVVEMALAHAIRDKTEAAYRRGDLFD 383 Query: 439 LLRKWHEKIETWILNEA 455 R + I NE Sbjct: 384 KRRTLMQAWADHIENEV 400 >UniRef50_A5CFJ0 Phage-related integrase n=19 Tax=Orientia tsutsugamushi RepID=A5CFJ0_ORITB Length = 442 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 79/454 (17%), Positives = 148/454 (32%), Gaps = 62/454 (13%) Query: 25 KMALSRQKFTFERLRRFTLPEGKKQTF-LWDADVTTLACRAT-SGAKAFVFQSVYAGKTL 82 M ++ KFT L + +P ++ TF D L + +G + G Sbjct: 3 NMPVTVFKFTQAALNKMQVPTKEENTFQCRDEKERNLVFIISYTGFRRLYLGININGMYY 62 Query: 83 RMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAV--KIAEAESLQAESRKTKVTFS 140 ++ IG+ D + +AR + ++L+ I GI+P + K + + K ++TF Sbjct: 63 KIKIGDFPDLTVAEARKKIQQLKRDIAKGINPMDERRKINKERREKREKRLKLKNELTFR 122 Query: 141 VAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLP 200 E Y + Y + H R E K A L N Sbjct: 123 QVHEKYTE-----------------YSSHHHRSWKRTSERVKIYA--------AFLYNKK 157 Query: 201 LSELTPDYIAAWLSTERQNR-PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVR 259 +SE+T + I + + L + G+I + Sbjct: 158 ISEITKEDIQKIFDEITARKHYVTANNILMNLSPIFNKAIEW----GLIDKNPVHGIKRH 213 Query: 260 KMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIAS-----------AYLQVLLLTGARRE 308 + E+++ + N + +L + L T AR Sbjct: 214 -----KQESRSRYVTNEEMERLMKVLVEKENSQLTEEQKQSKISETLFLFIALFTAARSG 268 Query: 309 EIASLRWSDVDFKWSSMRIKDKI---EGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVF 365 I ++RW ++ I + I L + +L +K W+ Sbjct: 269 NILAMRWDEISLSEKIWCIPKTKSKNGKQLYIGLADKLIAVLQNRK-----LCSKSEWIL 323 Query: 366 RSNSKSGKIIE---PRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGH 422 S + K I A + A +P++++H LRR+F T ++QI+GH Sbjct: 324 PSVKDNSKHISSSTIHRAWAKIRKKAGIPNVTIHDLRRTFATWMINNGETVDTISQILGH 383 Query: 423 KPSALAEKHYRRRPLDLLRKWHEKIETWILNEAG 456 + + + L + + K+ +L G Sbjct: 384 SNTNTTKIYIIH-SLAMAKIATNKVVENMLRIFG 416 >UniRef50_C3K287 Putative phage integrase n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K287_PSEFS Length = 401 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 54/440 (12%), Positives = 133/440 (30%), Gaps = 57/440 (12%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNI 89 R K L+D L +G + + + + GK R+ +G Sbjct: 1 MPLKDTNCRNAK--PQDKPYRLYDE--QGLYLEVQPNGGRYWRLKYRFLGKEKRLALGVY 56 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 + + +AR + + + +G DP + + + ++ TF +L Sbjct: 57 PEVGLQEARRKRDDARVQLASGQDPSLQRRMAKVVSQLDHQ------HTFESVATQWLNI 110 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 + + R R L LP+S ++ + Sbjct: 111 RESSWDPEYTRTVRQRL----------------------ELNAFPWLGKLPISSISTPML 148 Query: 210 AAWLSTERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 L + ++ + +++ G+L++ +++ +A Sbjct: 149 VENLQRIIKRGARETARRVAQIYKQIFEFAEAAGITPPNQIGNLSRTLPAKRVKHFAAVT 208 Query: 269 ADDCLQKEQLKSWFSAVRSLNNPI-ASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI 327 E+L + A+ S + L++ L R ++ + WS+V+ I Sbjct: 209 -----DPEKLGALLKALDSYAGTMPVCCALKLAPLLFCRPGDLRHMEWSEVNLDAGEWLI 263 Query: 328 KDKIEG----------ERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEP 377 + ++PL+ +L+ L + + F S + + Sbjct: 264 PGHKMKGLTATKQDRPDHLVPLSQQAIAVLHELK----PLTGRHRYAFPSARGGDRPMSN 319 Query: 378 RSAHNRALVL-AELPHISLHGLRRSFGTLAEW-VEVPTGIVAQIMGHKPSALAEKHYRRR 435 + + + ++ HG R + T+ + ++ + H + Y R Sbjct: 320 NAVLSALRRMDISGDEMTGHGFRATARTIGAEVLGFRPDLLEHQLAHTVKNPLGRAYDRT 379 Query: 436 P-LDLLRKWHEKIETWILNE 454 L R+ + ++ + Sbjct: 380 SFLPERREMMQIWADFLDSI 399 >UniRef50_A7HPZ7 Integrase family protein n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HPZ7_PARL1 Length = 389 Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats. Identities = 80/442 (18%), Positives = 147/442 (33%), Gaps = 71/442 (16%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGA-KAFVFQSVYAGK-TLRMTIGN 88 + T L+ P K Q D + R + G K+FV G+ R TIG Sbjct: 1 MRLTDISLKTLQ-PPVKGQVTYADDTLPGFGVRVSQGGVKSFVV---VHGRNRKRTTIGR 56 Query: 89 INDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQ 148 + DAR A+++ G + F + +L Sbjct: 57 YPTISLQDARKAAKQILAERTLGKH-------------------EAPPIDFEAGLKLFLA 97 Query: 149 ELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDY 208 K + ++ + L SL + L + Sbjct: 98 AHFPENYPKPR--------------------TRAETKRQLEKHFLPSLRHEKLEHIQARE 137 Query: 209 IAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 I+ + + P HA+ ++R F W+ + + R P + Sbjct: 138 ISRIIDKMHKT-PGEARHAFAVIRLFFNWAFRRGYVD--------RSPCERLQAPKQSLP 188 Query: 269 ADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIK 328 D L ++++++ R + S +Q+LLLTG RR EIASL+ +DF ++ + Sbjct: 189 RDRVLTQDEIRTVLGHARERDTTFNS-IVQLLLLTGQRRGEIASLQADWIDFDSRTITLP 247 Query: 329 ---DKIEGERIIPLTPYVSELL-NVLAQSPNSDVNKEGW---------VFRSNSKSGKII 375 K + + P +L L Q+ S + + +F + K Sbjct: 248 ATVTKNKRQHAFPFGEMAEVILKRALLQAQQSREERREYEDADEKALLLFPARGKHTAFD 307 Query: 376 EPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGH---KPSALAEKHY 432 + H +LH LRR+ T + VP + +++ H S + + Sbjct: 308 GWSKGKPNFDKGCPIDHWTLHDLRRTCATNLAALGVPVHVTEKLLNHISGTTSGIVAVYQ 367 Query: 433 RRRPLDLLRKWHEKIETWILNE 454 R +D +R E+ E + ++ Sbjct: 368 RHAYMDEMRDAIERWELHLRSQ 389 >UniRef50_B3AX37 Site-specific recombinase, phage integrase family n=7 Tax=Enterobacteriaceae RepID=B3AX37_ECO57 Length = 440 Score = 254 bits (649), Expect = 5e-66, Method: Composition-based stats. Identities = 74/441 (16%), Positives = 138/441 (31%), Gaps = 57/441 (12%) Query: 32 KFTFERLRR-FTLPEGKKQTFLWDA--DVTTLACRATSGAK--AFVFQSVYAGKTLRMTI 86 K T ++R E +D D L + F+ +AGK M I Sbjct: 23 KLTDIQIRAWIKADER------FDGKADGNGLYLCYPKNYTMPFWRFRYKFAGKQRAMVI 76 Query: 87 GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDY 146 G+ + + AR A+ L + G D K + AEA + E+ K + S +Y Sbjct: 77 GSYAELSLSRARETAKELSARVALGYDVAAEKQERKAEAL-AKMEAEKNAIRVSELAAEY 135 Query: 147 LQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTP 206 + + + + ++ ++ P Sbjct: 136 FE-----------------------RQILPRWKHPDILRRRIDKDINPRIGHMKAEDVKP 172 Query: 207 DYIAAWLSTERQNRPTVTAH-AYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVS 265 +I L A R R + + + + + V Sbjct: 173 RHIDEMLKAIVDRGAPTIATDVLRWTRRIFDYGIKRHVLE----INPCSAFEVSDAGGK- 227 Query: 266 ASKADDCLQKEQLKSWFSAVRSLN--NPIASAYLQVLLLTGARREEIASLRWSDVDFKWS 323 S D L +E+L +F A+R+ + ++LL R+ E+ + RW + D + Sbjct: 228 ESSRDRWLTREELIRFFQAMRTAKGFSRQNELTFKLLLALCVRKMELCAARWEEFDLDNA 287 Query: 324 SMRIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIE---- 376 + K IPL P V E L L WV + ++I Sbjct: 288 VWHLPEERSKNGDPIDIPLVPPVIEWLKELR----VLSCNSAWVLPARKMQHRMIPHIQE 343 Query: 377 ---PRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYR 433 P + + E+P ++H RR+ T + V + + + H+ + + R Sbjct: 344 STLPVALAKVRAEMPEVPDFTIHDFRRTARTHLAALGVDPVVAERCLNHRIKGVEGIYNR 403 Query: 434 RRPLDLLRKWHEKIETWILNE 454 + D K +++ Sbjct: 404 YQYFDERTSALAKWTNLLVSL 424 >UniRef50_Q7MKK6 Integrase n=6 Tax=Proteobacteria RepID=Q7MKK6_VIBVY Length = 402 Score = 254 bits (648), Expect = 7e-66, Method: Composition-based stats. Identities = 72/448 (16%), Positives = 137/448 (30%), Gaps = 78/448 (17%) Query: 30 RQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGN 88 +QK T ++ T+ + L D +++ R G + GK +G+ Sbjct: 4 KQKITASSIKNLTIADK----RLNDTEISGFHARISPKGVIKYYLYYRIHGKQRNFLLGS 59 Query: 89 INDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQ 148 N AR A+ + G D + + + ++ +T S E++ Sbjct: 60 ANALTPAQARDLAKEKAGQVAAGEDVQDTR-------HEAKKREQRNSLTLSKFLEEHYS 112 Query: 149 ELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDY 208 I+AKT + L PL E+T Sbjct: 113 AYLMSINAKTAQ-----------------------KSLMCIQSNFKHLSTKPLVEITAWD 149 Query: 209 IAAWLSTERQ--NRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSA 266 I W++ + P ++AY LRA + + +P Sbjct: 150 IQQWVAERSKAGRAPATISYAYNRLRAVFNRAVEWGFIDSHSLDN--------VKIPRID 201 Query: 267 SKADDCLQKEQLKSWFSAVRSLNNP-----------------------IASAYLQVLLLT 303 +K L + + ++++ + + + L T Sbjct: 202 NKRIRYLSVSEEAALLESLKARDARLKDEALQRYGKRAQRLVSQRYVDFLEPLIVLALNT 261 Query: 304 GARREEIASLRWSDVDFKWSSMRIKD---KIEGERIIPLTPYVSELLNVLAQSPNSDVNK 360 G R+ EI SL+WS ++ + + I+ K + +R IPL V +L + Sbjct: 262 GMRKGEILSLKWSHINMEDRYLTIRSENAKSKNKRTIPLNNTVYTMLQAWHEQ----NPD 317 Query: 361 EGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIM 420 VF + + L A + + H LR F + E +V +++ Sbjct: 318 TELVF--ERNGKPLDSYQYQWESLLKEAGIENFRFHDLRHHFASKLVMKEADLNVVRELL 375 Query: 421 GHKPSALAEKHYRRRPLDLLRKWHEKIE 448 GH + + Y + I Sbjct: 376 GHADLKMTLR-YAHLAPEHKASAVNLIG 402 >UniRef50_A1AQX4 Phage integrase family protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AQX4_PELPD Length = 389 Score = 254 bits (648), Expect = 8e-66, Method: Composition-based stats. Identities = 95/440 (21%), Positives = 170/440 (38%), Gaps = 59/440 (13%) Query: 28 LS-RQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAGKTLRMT 85 + + + T +R+ P KQ +WDA+ A R + G K F GK +R T Sbjct: 1 MPEKIRLTQKRVADLQ-PVAGKQFDVWDAEQPRFAVRVSPRGRKTFFVMRRVKGKLVRAT 59 Query: 86 IGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWED 145 +G + +D AR A + + G++P I + + A+ + S ++ Sbjct: 60 VGTFPEMNVDTARKMAAEMLVSMTAGVNPNIERKRER-------AQQKDKSRLLSAVFDS 112 Query: 146 YLQELRTG--ISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSE 203 YL I A TK Y + + L L + E Sbjct: 113 YLASGGKDGDIKASTKAAYRSAFRR------------------------LEKWQELKIDE 148 Query: 204 LTPDYIAAWLSTE-RQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMV 262 + + + + + H+ LLRA +K++ + + Sbjct: 149 IESEMVEQLHVSIVKDCGGYAANHSIGLLRALMKFAK-------------VEGNPAADVA 195 Query: 263 PVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKW 322 + + + E + + A+ L S +VLL TG R+ E LRW D+D + Sbjct: 196 WAKETPRREAMPPEAIPGFLKALDQLKGDNGSDLFRVLLFTGMRKSEAMGLRWIDIDLEN 255 Query: 323 SSMRIKDKIEGERI-IPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAH 381 S+ I++ G + IP++ +++ +L + WVF SNS+ G + + Sbjct: 256 KSLHIEETKTGPPLNIPISGHLAAILEKRKER-----ISSPWVFPSNSRVGHLTNDQQFC 310 Query: 382 NRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLR 441 L + H LR++F T+A + +P +V + GH P + +HY + LR Sbjct: 311 RELAALG--VRVYPHLLRKTFTTIAASL-IPGAMVDCLTGHVPQDVTGRHYTFPSVGQLR 367 Query: 442 KWHEKIETWILNEAGITIKN 461 E + IL+ AGIT ++ Sbjct: 368 PHTEAVTKEILSLAGITTRS 387 >UniRef50_A6X736 Phage integrase family protein n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X736_OCHA4 Length = 420 Score = 253 bits (647), Expect = 9e-66, Method: Composition-based stats. Identities = 91/449 (20%), Positives = 165/449 (36%), Gaps = 49/449 (10%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWD---ADVTTLACRATSGAKAFVFQSVYAGKTLRMTIG 87 T + T T LWD V R A+ F+ + G++ M+IG Sbjct: 1 MPITKNDVDGLTP-----DTILWDDGRGSVAGFGVRRQRVARVFILKYSVRGRSRWMSIG 55 Query: 88 NIND-WKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDY 146 W ++ AR EA+RL L+ +G DP A+ + + + +T + +DY Sbjct: 56 KYGSPWTVETARLEAKRLLGLVASGGDPAAARDEQRSA---------EGPLTVAELCDDY 106 Query: 147 LQELRTG-ISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 ++ R G I + RP + + R + + + ++ + ++T Sbjct: 107 MKAARAGAILTRFHRPKKESTLQIDVGRIERHIKPLIGKKHVIEVD--SKVVKRLIHDIT 164 Query: 206 PDYIAAWL------STERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVR 259 A + A LL + W+ + L +D V Sbjct: 165 VGKTATSIKTGTRGRAIVTGGAGSAARVADLLSGIMTWAVDEG---------LIRDNPVH 215 Query: 260 KMVPVSASKADDCLQKEQLKSWFSAV-------RSLNNPIASAYLQVLLLTGARREEIAS 312 ++ L + +LK + + A + +L+LTG R EIAS Sbjct: 216 RVRRYRGQPRQRFLSEVELKQLGKVLSAGRDCNEKAIHRYALTVVHLLVLTGCRLNEIAS 275 Query: 313 LRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSG 372 LRWS+VD +R+ D G+ + + +++L+ + + + WVF G Sbjct: 276 LRWSEVDLSQRCLRLGDTKTGQSLRAIGSAATKILSNIDKL-----SGSDWVFPGARGDG 330 Query: 373 KIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHY 432 + R AEL +++ H LR ++ + A G +A ++GHK + + Y Sbjct: 331 PYQGTKREAARIFQTAELDNVTCHTLRHTYASFASGCGYSDGTIAGLLGHKGRGVTSR-Y 389 Query: 433 RRRPLDLLRKWHEKIETWILNEAGITIKN 461 RP L E + I +T + Sbjct: 390 IHRPDSALLAAAEDVSEHIKGLLNVTSND 418 >UniRef50_Q92LG2 Phage-related integrase n=1 Tax=Sinorhizobium meliloti RepID=Q92LG2_RHIME Length = 409 Score = 253 bits (647), Expect = 9e-66, Method: Composition-based stats. Identities = 71/450 (15%), Positives = 140/450 (31%), Gaps = 57/450 (12%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTI 86 + K T +++R P D L R +G+K+F+ ++ K TI Sbjct: 1 MPINKLTDKQVRGIKKPGNHP-------DGGNLYLRVRENGSKSFIVKATIDKKQREWTI 53 Query: 87 GNIND----WKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVA 142 G+ + + +AR + +I G K + F Sbjct: 54 GSYGSEEHHFSLAEARKRRDEIMAVIRAGG--ISEPTGKSVTQSVEPESTTFPAPLFGPF 111 Query: 143 WEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLS 202 + +Q++ G R + + + Sbjct: 112 SIELIQQIEGGFRNAKHRAQWRSTLETYCKSIW----------------------EKRVD 149 Query: 203 ELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMV 262 +T D + A L + + + + + + G P + Sbjct: 150 RITTDDVLAILRPIWSTKAETASRVRGRIERVLNAAKVRGFRSGENPAAWQGHLQLLLPK 209 Query: 263 PVS-ASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFK 321 L + L + + + S++ IASA LQ L+LT AR E+ +W + D + Sbjct: 210 RQKLQRGHHPALPFQDLPTLWQKLTSIDT-IASAALQFLILTAARSGELRGAKWEEFDLE 268 Query: 322 WSSMRIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKI--IE 376 I K E ++PL+ E+L + + + +VF + + + Sbjct: 269 KRLWTIPASRMKAAREHLVPLSDSCIEILKRMQKIRH-----SDFVFPGTREHAPLSDMT 323 Query: 377 PRSAHNRALVLAELPHISLHGLRRSFGTLAEW-VEVPTGIVAQIMGHKPSALAEKHYRRR 435 + ++HG R +F + + H + E+ YRR Sbjct: 324 LSKVLHGLCK-----GYTVHGFRSTFRDWCGEKTDFSREHAEACLAHTIGSAVERAYRRG 378 Query: 436 -PLDLLRKWHEKIETWILNEAGITIKNNVD 464 L+ R+ E +I G + ++ VD Sbjct: 379 NSLEPRRRIMTAWEAFI--LTGRSPEDQVD 406 >UniRef50_B7S183 Site-specific recombinase, phage integrase family n=2 Tax=Proteobacteria RepID=B7S183_9GAMM Length = 421 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 113/448 (25%), Positives = 184/448 (41%), Gaps = 55/448 (12%) Query: 30 RQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAGK---TLRMT 85 R FT RL R PEGKK +++D V+ LA TS G K F+ GK ++ Sbjct: 4 RFNFTKSRLERLDCPEGKKLHYVYDEAVSGLAMYVTSAGTKKFLVYRKAKGKGNKPVKRG 63 Query: 86 IGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWED 145 +G +D+ARA A + ++ G +P + E+R+ K+T ++ Sbjct: 64 LGKFPAMSVDEARAGAIDAISQLNKGKNPNE-----------SEREARRLKITLDDVFKA 112 Query: 146 YLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 YL E +S T Y L + LS + Sbjct: 113 YLAERGNQLSENTVSNYKG-----------------------VVNKHLKDWKSKQLSSIN 149 Query: 206 PDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQG---IIPGDLAQDYNVRKMV 262 D +A + + + R+LRA ++N + + P + Q Sbjct: 150 RDLVAKKHAKISKESQSAANKTMRVLRALFNYANGAYESSDGRSLFPDNPVQRL-THTRT 208 Query: 263 PVSASKADDCLQKEQLKSWFSAV------RSLNNPIASAYLQVLLLTGARREEIASLRWS 316 + D+ +++ QL+SWF AV YLQ +LLTG RR E SL+ + Sbjct: 209 WNREERRDNTIKRTQLESWFKAVLKLSESEDEFERTVGDYLQFVLLTGLRRREATSLKVA 268 Query: 317 DVDFKWSSMRIKDKIEGERI-IPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKII 375 DVDFK S I + + +P++ Y +LL D ++F SG++ Sbjct: 269 DVDFKERSFTIYLTKNHQPLSLPMSDYTLKLLK-----RRCDTTSTEYIFHGTGSSGRLN 323 Query: 376 EPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRR 435 +PR N V +E+ ++H LRR+F TLAE ++V + +++ H P Y R Sbjct: 324 DPRRLINTLRVSSEV-DFTIHDLRRTFITLAESLDVSAYALKRLVNHSPGGDVTAGYIRM 382 Query: 436 PLDLLRKWHEKIETWILNEAGITIKNNV 463 ++ LRK + I +IL A + ++ Sbjct: 383 DVERLRKPTQDINDYILKLAKVKKSADI 410 >UniRef50_B9Z434 Integrase family protein n=2 Tax=Neisseriaceae RepID=B9Z434_9NEIS Length = 395 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 71/429 (16%), Positives = 144/429 (33%), Gaps = 48/429 (11%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQS-VYAGKTLRMTIGNI 89 + ++R T K L D L R +GAK + ++ K TIG Sbjct: 1 MPLSDVKIR--TSKPLDKPYKLQDGKGLYLEIR-PTGAKFWRYRYWTSPTKDGIYTIGEY 57 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 D + +ARAE R++ L+ G +P K + ++ A T +V E++ Sbjct: 58 PDVSLAEARAERERVRALVKEGKNPTAEKKLDKLRSQKETA------TTLAVVAEEWKVV 111 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 S ++ D L LP+ E+T + Sbjct: 112 NWPHWSETYRKQVEKHLQRD----------------------LLDEYGELPIREVTSAQL 149 Query: 210 AAWLSTERQNR-PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 A +S + P++ + + + + + D Y +R + + ++ Sbjct: 150 LAAISKIDERGAPSIARLVRQWAGSIFRHAIATLR------ADSDPTYPLRGALRMPPTR 203 Query: 269 ADDCLQKEQLKSWFSAVRSLNNP-IASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI 327 + L ++L + A+ + + + + +LT R +E+ W++ D + RI Sbjct: 204 HNAHLSADELPGFLKALDAYKGFGLTRLAVNLQMLTLVRTQELRLAEWAEFDLDAAEWRI 263 Query: 328 K---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRA 384 K+ I+PL ++ L + WVF + + + Sbjct: 264 PPEKMKMRDPHIVPLPKQAVAIMREL----EPLTGRRRWVFPNVRNHDTGMTNTTILRVI 319 Query: 385 LVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRR-PLDLLRKW 443 +L + HG R + T+ T I+ + + H + Y L R+ Sbjct: 320 EILGYKGRATGHGFRATASTILHEQGWNTDIIERQLAHLERNKVKAAYNHAGYLKERREM 379 Query: 444 HEKIETWIL 452 + ++ Sbjct: 380 LQAWADYLD 388 >UniRef50_B6R5P1 Phage integrase n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R5P1_9RHOB Length = 365 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 81/390 (20%), Positives = 141/390 (36%), Gaps = 67/390 (17%) Query: 84 MTIGNIND-WKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVA 142 ++IG W ++ARAEA+R+ + G DP A+ +R+ +T + Sbjct: 17 LSIGRHGSPWTTEEARAEAKRVLGDVAHGGDPMAARQ------------ARRKDLTVAEL 64 Query: 143 WEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLS 202 + YL+E A T R I HI + +L +S Sbjct: 65 CDLYLEEGTATKKASTIATDKGR-IERHIK---------------------PVIGDLLVS 102 Query: 203 ELTPDYIAAWLSTERQN---------------RPTVTAHAYRLLRAFIKWSNYQKKYQGI 247 ++ +++ L + + LL ++N Sbjct: 103 DIKANHVRTLLKKVAEGNLPREGVGPVADKLGGKGTASRTVGLLGGIFSFANELGYR--- 159 Query: 248 IPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLN----NPIASAYLQVLLLT 303 D V + K L + +L F + + NP A +++L LT Sbjct: 160 ------TDNPVHGVKRFPDQKNQRYLTQSELTRLFELLEEIEADGANPKAVKIIKLLALT 213 Query: 304 GARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGW 363 GARR EI L+WS+V + ++ +D G++ IP++ V LL Q D + Sbjct: 214 GARRGEIEQLKWSEVFLEQGTLHFEDSKTGQKSIPISAAVIGLLREAEQERCID---SPY 270 Query: 364 VFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHK 423 VF S G + + +H LR SF +LA ++ ++GHK Sbjct: 271 VFPSERGDGFYVGATKVWRDLRTKFGDEKLRMHDLRHSFASLAVAGGASLPMIGALLGHK 330 Query: 424 PSALAEKHYRRRPLDLLRKWHEKIETWILN 453 +A ++ Y D LR +++ +L Sbjct: 331 DTATTQR-YAHLSADPLRSISDQVGAKLLG 359 >UniRef50_Q1NSR7 Phage integrase n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NSR7_9DELT Length = 452 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 84/451 (18%), Positives = 155/451 (34%), Gaps = 51/451 (11%) Query: 27 ALSRQKFTFERLRRFTLPEGKK-QTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMT 85 + + K T ++ L + T +WD+++ R T + F+ Q G+T+R Sbjct: 34 PIPKIKLTQTTVKALPLYDQSGHXTMVWDSELRGFGVRLTPAGRTFIVQGRINGRTIRRA 93 Query: 86 IGNI--NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAW 143 +G + D AR +A + GID ++ +T Sbjct: 94 LGRLEDGDITPQQAREQAIIRLAEMRKGID------------SGAPGKATNGPLTLKEWA 141 Query: 144 EDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSE 203 EDY R S+ + + I H+N G + N P+ E Sbjct: 142 EDYKAHKRKKNSSLPLKDSTKADIDKHVN------------------GIFKAWSNKPIGE 183 Query: 204 LTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVP 263 + + + + T A+R+ RA W+ + I Sbjct: 184 IDREMVLTLYRNGCKRSSAQTCQAFRVFRALYNWALAKSTGADGIATIPPNPVGALVNEW 243 Query: 264 VSASKADDCLQKEQLKSWFSAVRSLN-------NPIASAYLQVLLLTGARREEIASLRWS 316 + + + L +++ + + +R + A+ + +LLTG R E +L WS Sbjct: 244 TTPAPRTNRLPMDKIGAAWLFLREQSQSAAFAATRTAADMVCFMLLTGCRIGEAKNLPWS 303 Query: 317 DVDFKWSSMRIKDKIEG-ERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKII 375 VD + R+ D I+PL+ ++L Q +VF + + G I Sbjct: 304 QVDLDAKTWRLPDPKNRVPIILPLSNLAHQILTHRRQV-------NSFVF-NGRQGGHIK 355 Query: 376 EPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSA-LAEKHYRR 434 + R IS H LRR+F +A+ ++ ++ H + + HY Sbjct: 356 DCRGLLENLAKHIG-HQISPHDLRRTFAAIAKECKIKHTERKLLLNHALAGDVTGIHYDD 414 Query: 435 RPLDLLRKWHEKIETWILNEAGITIKNNVDM 465 + I WI +A + N D+ Sbjct: 415 NDHSGMTTEVNLIADWITRQAELAEGNITDI 445 >UniRef50_B9JF62 Tyrosine site-specific integrase/recombinase protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JF62_AGRRK Length = 431 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 76/474 (16%), Positives = 145/474 (30%), Gaps = 87/474 (18%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYA--GK---T 81 + K + L G+K +D + + +GAK+++ + G+ Sbjct: 1 MPTIKISRRALAEIE--PGEKPVIYYDNALKGFGLKVMPTGAKSWIIEYRPGAGGRGVSK 58 Query: 82 LRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSV 141 R+ IG + + AR EA R + G DP A+ + + Sbjct: 59 KRIKIGTLATHSPEAAREEASRTLARVTLGSDPAAARTD------------ERKGQVVAA 106 Query: 142 AWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPL 201 E +L+E + +I L +L Sbjct: 107 VAETWLEEHVLIKRKPKTYNEYKLAVERYIK---------------------PVLGSLKF 145 Query: 202 SELTPDYIAAWLSTE-------RQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQ 254 + + P + + T+ A L A W+ K Sbjct: 146 ALVEPSDVLRMQAKIIRGKVNKANGGRTMANRALATLSAIYGWAQDLKIV-------PLG 198 Query: 255 DYNVRKMVPVSASKADDCLQKEQLKSWFSAV----------------------------R 286 V + ++ + L E++ S +A+ R Sbjct: 199 FNPVTSIERFKENQIERFLTSEEIGSLATALTEAETIGLPYEVDETKAKAKHANRVENRR 258 Query: 287 SLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSEL 346 ++ A A +++ L TG RR EI L WSDVD + + + D G++ + L+P + Sbjct: 259 TVYGEHAIAAIRLYLFTGCRRSEILRLTWSDVDLERGILFLPDSKTGKKPVILSPQAQAI 318 Query: 347 LNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLA 406 L L + + + A L + LH LR ++ ++ Sbjct: 319 LTNLTRVGKYVIAGAD---AGTKDEAPRADIDRPWKAVTRRAGLHKLRLHDLRHTYASIG 375 Query: 407 EWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWILNEAGITIK 460 I+ +++GHK A ++ Y + +++ I I T Sbjct: 376 AGGGQGLPIIGKLLGHKNIATTQR-YAHLDTNPMKRVAGFIGDHISQAMEDTNG 428 >UniRef50_A6Q4N1 Site-specific recombinase, phage integrase family n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q4N1_NITSB Length = 412 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 83/449 (18%), Positives = 150/449 (33%), Gaps = 57/449 (12%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRM 84 M S + +LR +K L D + L +G K F VYAGK Sbjct: 1 MPKSIRPLNDLQLRNAK--PKEKNYKLRDGE--GLYILIKPNGRKIFRLDYVYAGKRNTY 56 Query: 85 TIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWE 144 TIG+ + AR ++ LI GIDP K + + E+ K +F E Sbjct: 57 TIGDYPQISLAQARKIKYEVKELIKNGIDPNRYKQEQK---RIKELEANKKFTSF--VIE 111 Query: 145 DYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSEL 204 ++Q +S + A++I + + + E+ Sbjct: 112 RFIQHKAKEVSKARLQKNYINTFANYIT---------------------PFIGEVKIDEV 150 Query: 205 TPDYIAAWL----------STERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQ 254 T I + + YRLL++ ++ + Q + A Sbjct: 151 TKQDIIKIVKNTYSTKLQKDNRSTGKTYKAREVYRLLKSLFDFAIHNDYTQT----NPAV 206 Query: 255 DYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLR 314 ++ ++P + E++K + + SL NP LQ + LT R +A+L+ Sbjct: 207 GIDIDSLIPKHKPTRHKAVTNERIKEIYQKICSLQNPYFRLPLQYIALTAVRFGNVANLK 266 Query: 315 WSDVDFKWSSMRIK----DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSK 370 W DF + IPLT + +++ + VF S Sbjct: 267 WDYKDFDKRVIIYPAEAMKTKNQPFRIPLTDAIVKVIQQAKAIASPY---SEIVFGSPIN 323 Query: 371 SGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAE----WVEVPTGIVAQIMGHKPSA 426 + K I + + P LHG R SF T+A + + H + Sbjct: 324 AHKPISDNTLRKVLKIDLNEPEQDLHGFRSSFETIALEHQKEHGCSFEAIEAQLHHNIGS 383 Query: 427 -LAEKHYRRRPLDLLRKWHEKIETWILNE 454 + + + R L+ ++ ++ ++ Sbjct: 384 KVTQSYLRSDFLEDRKELLNWWANYLNSQ 412 >UniRef50_A0EVM1 Integrase n=77 Tax=cellular organisms RepID=A0EVM1_ECOLX Length = 396 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 71/437 (16%), Positives = 143/437 (32%), Gaps = 62/437 (14%) Query: 33 FTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAGKTLRMTIGNIND 91 T RLR +K + D D L T G +F + G+ +T G Sbjct: 2 LTDTRLRHLK--PKEKLYKVNDRD--GLYVAVTPAGTISFRYNYSINGRQETVTFGRYGV 57 Query: 92 --WKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 + +AR + ++ +G P KA A + + TF E +L+ Sbjct: 58 GGITLAEARERLNEAKKMVASGRSPAREKARDKARIKDAE--------TFGAWAEKWLRG 109 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 + S + R + + L+E+T + + Sbjct: 110 YQMAESTRDMR------------------------RSVYQRELKSKFAQQKLTEITHEDL 145 Query: 210 AAWLSTERQNR-PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 A + P HA ++ +W+ + + + P DL + ++ K P Sbjct: 146 RALTDNIVERGAPATAVHAREIVLQVYRWAIERGQ-KVENPSDLVRPASIAKFEP----- 199 Query: 269 ADDCLQKEQLKSWFSAVRSLNN-PIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI 327 D L ++ + + + P A +++LLLT R+ E+ + W +++F + I Sbjct: 200 RDRALTPVEIGLMYRYMERVGTTPSIRAAVKLLLLTMVRKSELTNATWKEINFSEALWTI 259 Query: 328 K---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHN-- 382 K ++ L+ +++ L S ++ S S + + + Sbjct: 260 PKERMKRRNPHLVFLSRQAMDIMIALKTFAGS----SDFILPSRYDSDAPMSSATLNRVL 315 Query: 383 ----RALVLAE--LPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRP 436 R LP H LRR+ TL T + + + H+ + + + Sbjct: 316 TLTYRLAQKEGDLLPKFGPHDLRRTASTLLHEAGYNTDWIEKCLAHEQKGVRAVYNKAEY 375 Query: 437 LDLLRKWHEKIETWILN 453 + + + I Sbjct: 376 REQRAEMLQDWANMIDE 392 >UniRef50_A4F5J8 Putative uncharacterized protein n=1 Tax=uncultured bacterium RepID=A4F5J8_9BACT Length = 390 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 65/421 (15%), Positives = 142/421 (33%), Gaps = 57/421 (13%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIGNIN 90 T + ++ G+K + D D L+ A SG +F F Y + +T+G Sbjct: 1 MALTDKAIKALK--PGEKTYKVADRDGLYLSV-APSGTMSFRFNYRYNNRQQTVTLGKYG 57 Query: 91 DWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQEL 150 + + AR + + + + GI P K +FSV + Y +E Sbjct: 58 EITLAQAREKLLKAKADLAAGISPAKKKQEIKNTLAE---------NSFSVWLDKYTEEC 108 Query: 151 RTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIA 210 S K R Y+ +L + L E+T + + Sbjct: 109 GVADSTKKMRGYAIDNYLR------------------------PALGKMSLFEITENEVR 144 Query: 211 AWLSTE-RQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKA 269 A +Q P+ +++ +++ + P D + ++ Sbjct: 145 ALAEDLVKQQAPSTALLCRMIIKNVYTFASMHGGPKLKSPTDFVRPSSIHTF-----KSR 199 Query: 270 DDCLQKEQLKSWFSAVRS-LNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIK 328 + ++ + + ++ + + +++LLT R+ E+ + WS++D+ + RI Sbjct: 200 TRAMSPREIGYVLNGIEQSSSDISSKSAFKLILLTLLRKSEVINGVWSEIDWNEKTWRIP 259 Query: 329 ---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRA- 384 K + + L+ ++L L K ++F + K + + + Sbjct: 260 AERMKTKRPHNVYLSKQAFDILVCLRTLS---TCKSDFIFPAKYGLNKPMATSTPNRLLE 316 Query: 385 -----LVLAE--LPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPL 437 A + ++H LRR+ TL E + + + H S + + Sbjct: 317 LGMANAKKAGIEIEPCTIHDLRRTASTLLNEAEFNSDWIEASLAHVASGVRAVYNVADYR 376 Query: 438 D 438 + Sbjct: 377 E 377 >UniRef50_D2MI75 Phage integrase family protein n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MI75_9BACT Length = 398 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 71/430 (16%), Positives = 135/430 (31%), Gaps = 51/430 (11%) Query: 32 KFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNIN 90 K TF +LR P D L + G+K++V + GK + +G Sbjct: 3 KLTFGKLRALNEPG-----LYGDGGT--LFLKVSPGGSKSWVQRFTIKGKRHDVGLGGWP 55 Query: 91 DWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQEL 150 + +AR A + + G DP K +A TF Y +E Sbjct: 56 VVSLQEARERAFDNRRAVAHGRDPLAEKQ---------KASKAAAVPTFRAVARKYYEEN 106 Query: 151 RTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIA 210 A + + + ++P+ + + + Sbjct: 107 LPRWKAGRHTDRWLQVVEKY---------------------AFPVFGDVPVDRVGREDVL 145 Query: 211 AWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKAD 270 L+ +P +R + W I G + S + Sbjct: 146 RMLTPIWTAKPEYARKLRHRVRLILDWCQAHGYVHTNIAG---EQIGGALPSMPSVKEHH 202 Query: 271 DCLQKEQLKSWFSAVRSLNNPI-ASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIK- 328 L ++ + + + A L+ L+LT R E + W +++++ + I Sbjct: 203 RSLPYAEVSQALDLIEASGASLSAKLCLRFLILTAVRPGEARNATWEEINWETKTWTIPA 262 Query: 329 --DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALV 386 K + E +PL+ ++L ++ + +F S+ K K + + Sbjct: 263 GKMKAKAEHRVPLSREAMQVLERASRVR----GESPLIFPSSLKRAKPLSDMTLTKLLRD 318 Query: 387 LAELPHISLHGLRRSFGTLAEWV-EVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKW-H 444 + HG R SF T A PT ++ + H EK Y R L R+ Sbjct: 319 VGLREKTVPHGFRSSFRTWAGEQTNSPTPVIELCLAHSVGNAIEKAYTRSDLLQKRQRLM 378 Query: 445 EKIETWILNE 454 ++ ++ E Sbjct: 379 QEWGRYVTGE 388 >UniRef50_B5QDA8 Phage integrase family protein n=1 Tax=Salmonella enterica subsp. enterica serovar Virchow str. SL491 RepID=B5QDA8_SALVI Length = 403 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 65/435 (14%), Positives = 142/435 (32%), Gaps = 52/435 (11%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNI 89 +LRR + D L+ R G F ++ + GK +R+ +G Sbjct: 1 MPLNDTKLRRIDGKPYDGPVEIPDGG--GLSVRISPKGLITFQYRYRFNGKPVRLKLGVY 58 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 I +AR + + G +P + + L + + + ++L Sbjct: 59 GSMSIKEARDAVEVCKKWLSEGKNPAVYRK--------LDKKKKTESPDIATLVNEWLDT 110 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 K Y R + H+ L + ++ P + Sbjct: 111 PSAKDLVKY--EYWKRMLKLHVTDLY---------------------GQLIVDDMDPTHW 147 Query: 210 AAWLSTERQNR-PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 ++ P + ++ IK++ +K+ I + + + + Sbjct: 148 EKIFLAITKSGSPVQAGNVLVKMKQVIKYALRRKR----ITSNSLMLLELTDVGKLPED- 202 Query: 269 ADDCLQKEQLKSWFSAVRSLNNPI-ASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI 327 + L ++ ++ A+ +++LLLTG R E+ R D D + I Sbjct: 203 GERFLNDVEIGKFWLAIDKTRMSWQNKMVMRLLLLTGCRGVELRLARKVDFDLEGRVWVI 262 Query: 328 KDKIEGERIIP---LTPYVSELLNVLAQSPNSDVNKEGWVFR-SNSKSGKIIEPRSAH-- 381 + R L+ E L + + VF + + + + + Sbjct: 263 PKENSKTRKRFVRGLSELSVECLKQVFEV----YPGNSIVFPPATLQEDRPMAAGTIISL 318 Query: 382 -NRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLL 440 + + + PH S H LRR+ T + V + +I+GHK + + + + + Sbjct: 319 AEQVETMMDCPHWSAHDLRRTCKTKMAELGVAPHVSEKILGHKLTGMLAVYDQYDYIPEQ 378 Query: 441 RKWHEKIETWILNEA 455 ++ +K +L+ A Sbjct: 379 QEAADKWAQKVLDCA 393 >UniRef50_B7N6K6 Prophage CP4-57 integrase n=8 Tax=Enterobacteriaceae RepID=B7N6K6_ECOLU Length = 415 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 78/438 (17%), Positives = 148/438 (33%), Gaps = 50/438 (11%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVY--AGKTL 82 M + T + L D + L TSG KA+ F+ + K Sbjct: 1 MPKQLKPLTNVEIAGAK--PRSTDYELRDGE--GLYLLVKTSGRKAWHFEYYHPVTKKRT 56 Query: 83 RMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVA 142 + ++G + AR + + L+ GIDPR A + + + + T Sbjct: 57 KTSLGPYPVVTLAMARETRTKYRRLLWQGIDPRQH------LAGIAEEKRLQNECTLEKV 110 Query: 143 WEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLS 202 E +L+E + ++ DH R SL + P++ Sbjct: 111 AEQWLKEKKR----------TSDLSEDHAKDVWRS----------LEMHVFPSLGSTPVT 150 Query: 203 ELTPDYIAAWLSTERQNR-PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKM 261 E+ P + L+ + L +++ ++ +I + A + R Sbjct: 151 EIRPKMLKEHLTPLEEQGILETLRRVISRLNEIFRFAISEE----LIEFNPADNLVARFK 206 Query: 262 VPVSASKADDCLQKEQLKSWFSAVRSLNNPI-ASAYLQVLLLTGARREEIASLRWSDVDF 320 P + L +L A+++ + ++ LLT R E S RW D+D Sbjct: 207 KPKKQN--MPALPPSELGRLMLALQNASIRKETRCLIEWELLTWVRPGEAVSARWCDIDM 264 Query: 321 KWSSMRIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEP 377 K + RI K+ +PL+ +L ++ WVF S K + + Sbjct: 265 KKAEWRIPDTFMKMNRSHTVPLSKQALRVLQIM----EPVSRHRPWVFPSIRKPLEHMHQ 320 Query: 378 RSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRR-RP 436 ++A+ + + + HG+R T A P ++ + H+ E Y R Sbjct: 321 QTANAALIRMGFGGELVAHGMRSIART-AGAGHFPREVLESALAHQKEDEIEAAYNRSDY 379 Query: 437 LDLLRKWHEKIETWILNE 454 L+ R + ++ Sbjct: 380 LEQRRPLMQWWGNYVDAA 397 >UniRef50_A1VQL7 Phage integrase family protein n=2 Tax=Burkholderiales RepID=A1VQL7_POLNA Length = 413 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 64/441 (14%), Positives = 120/441 (27%), Gaps = 57/441 (12%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIGNIN 90 T + D + T K + +AGK + +G Sbjct: 1 MPLTDIFTKNTKHSGAPAGDKHTDGG--GMYLLVTKAGKYWRMNYRFAGKRKTLALGVYP 58 Query: 91 DWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQEL 150 + +AR + + L+ IDP AK QA + TF ++ Sbjct: 59 AVSLAEARQGRDKARKLLAQDIDPSAAKQEDR------QATATAAANTFEAVAREFHALK 112 Query: 151 RTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIA 210 G S + + LPLS + + Sbjct: 113 AGGWSEGHATKWLRM----------------------NELYLFPHIGTLPLSTIKAPTLL 150 Query: 211 AWLSTERQNRPTVTAHAYRLL-RAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKA 269 A L + TA + + ++ + + DL +A Sbjct: 151 AALRKVEKKGILSTAQDLQAMAGQVFRYGVQTGRCESNPGVDLKGALQPHIAKHFAA--- 207 Query: 270 DDCLQKEQLKSWFSAVRSL-NNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIK 328 L + + A+ + P A L++ L R I ++ W+ +D + I Sbjct: 208 --ILDPVEAGAMLRAIDAYTGQPETLAALKLSALFFQRPGNIRAMEWAWIDLDGQMLTIP 265 Query: 329 DK----------IEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPR 378 K +PL ++L + Q +VF + + Sbjct: 266 AKSMKSSKHEKANGKPHTVPLARQALDVLKSIKQL----TGHGRYVFPGARTGERPMSDG 321 Query: 379 SAHNRALVL--AELPHISLHGLRRSFGTLAEW--VEVPTGIVAQIMGHKPSALAEKHYRR 434 + + L H+ HG R T+ +P +V +GH Y R Sbjct: 322 TINAALRRLDYGNNEHV-AHGFRAMARTMMAERLSGIPQDMVEAQLGHGKKGPLGSAYDR 380 Query: 435 R-PLDLLRKWHEKIETWILNE 454 L ++ + ++ Sbjct: 381 SEYLPQRQQMMQTWADYLDKL 401 >UniRef50_A1W6C2 Phage integrase family protein n=8 Tax=Burkholderiales RepID=A1W6C2_ACISJ Length = 459 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 72/422 (17%), Positives = 143/422 (33%), Gaps = 44/422 (10%) Query: 37 RLRRFTLPEGKKQTFLWDADVTTLACRATSG-AKAFVFQSVYAGKTLRMTIGNINDWKID 95 +L + K D + L + T K+++F+ M IG ++ + Sbjct: 6 KLTALKVTRLSKPGRYSDGN--GLYLQITKALVKSWIFRYARGTGEHFMGIGPVHTVNLA 63 Query: 96 DARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGIS 155 +AR +AR+ + L+ G+DP + +A +A+A+++QA ++ F ++Y++ + Sbjct: 64 EAREQARKARLLLRDGVDPLMHRAEALAKAKAVQASNKI----FRDCMDEYIKSHKESWR 119 Query: 156 AKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLST 215 + + + ++ + + + + L Sbjct: 120 NEKHQKQWEATLVEY---------------------ACPVFGKMHVRLINTPLVLQVLEP 158 Query: 216 ERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPV--SASKADDCL 273 + + + + + W+ Q +G P P + L Sbjct: 159 IWKTKTETASRVRERIERVLAWATTQGFREGENPARWRGHLQELLPKPSKLKKVRHHPSL 218 Query: 274 QKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIK---DK 330 + ++ + IA+ LQ +LT R E+ +W+++D I K Sbjct: 219 PYGHVGAFVRLLAREKG-IAARALQFTILTACRTGEVIFAKWNEIDLDAKVWIIPKERMK 277 Query: 331 IEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAEL 390 E +PL LL L WVF ++ + A L + Sbjct: 278 AHKEHRVPLVRDAVTLLERLR------GLDPVWVFPGAKQNRPMSN--MAMANVLERMQR 329 Query: 391 PHISLHGLRRSFGTLAEWVE-VPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKW-HEKIE 448 I++HG R +F T A P + + HK E+ YRR L R+ Sbjct: 330 SDITVHGFRSTFRTWAAERTLYPKEMPEMALAHKVGTEVEEAYRRTDLFERRRALMRDWA 389 Query: 449 TW 450 W Sbjct: 390 EW 391 >UniRef50_Q2NBN0 Site-specific recombinase, phage integrase family protein n=3 Tax=Erythrobacter RepID=Q2NBN0_ERYLH Length = 398 Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats. Identities = 74/421 (17%), Positives = 144/421 (34%), Gaps = 63/421 (14%) Query: 43 LPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEA 101 +P+GK +T W R SG ++ Q+ AG+ +TIG + A+ A Sbjct: 26 VPKGKARTTTWLGVEHGFGIRHYPSGRNVYIVQTRMAGRMRTVTIGPTSVLTRYQAQMVA 85 Query: 102 RRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRP 161 RR+ G DP + ++ +F+ +Y A T Sbjct: 86 RRVIAYAQVGRDPATERQR------------IRSAPSFADFVTEYWDRWAPRWKASTLET 133 Query: 162 ---YSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQ 218 Y RY+ D + + + + EL ++ +W + Sbjct: 134 HTGYRRRYLDD-------------------------AFVGVYIDELNEGHVTSWFADLNN 168 Query: 219 -NRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQ 277 P + + +L+ + + L R + P + + L ++ Sbjct: 169 LTGPGASNRTFEILKHMLNKAEDWGYR-------LENTNPCRSVRPNRKRQCERFLTNDE 221 Query: 278 LKSW------FSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKI 331 L A + A + +LLLTG R+ EI +L W+D+ K + + ++D Sbjct: 222 LARLGAELTNLRASEDRTKQCSGAAITLLLLTGCRKSEILTLEWTDI--KGNRLHLRDSK 279 Query: 332 EGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELP 391 G R + L E++ L + + F + + R A LP Sbjct: 280 TGPRTVWLGSAAREVIAALPRFERI-----PYPFWNYRYRKPLRCVNGFWRRLRDEAGLP 334 Query: 392 HISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWI 451 + +H LR +F + A + ++ +++GH + Y L + ++I + Sbjct: 335 DVRIHDLRHTFASHAAMNKETLPMIGRLLGHANVQTTAR-YAHFDDGHLLEAAQQIGDLL 393 Query: 452 L 452 Sbjct: 394 E 394 >UniRef50_Q7WFY2 Phage-related integrase n=1 Tax=Bordetella bronchiseptica RepID=Q7WFY2_BORBR Length = 424 Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats. Identities = 95/455 (20%), Positives = 160/455 (35%), Gaps = 55/455 (12%) Query: 28 LSRQK-FTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMT 85 + K T + + Q F W + A R T SGAK+++ Q KT R T Sbjct: 1 MPTVKKLTKQVVDGLP-TPATGQAFHWCSVTPGFAVRVTASGAKSYIVQGRVNSKTCRYT 59 Query: 86 IGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWED 145 IG D+AR A + G++P++ + + A VT ED Sbjct: 60 IGPCELLGTDEARKRALARLLEMHDGMNPQVERKRRQA-----------QGVTLREVMED 108 Query: 146 YLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 Y++ RT +S + LA + P++ +T Sbjct: 109 YVENKRTK--------------------HGTLRDSSQADIKRCVTQHLADWADKPVASIT 148 Query: 206 PDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNV---RKMV 262 + PT +R LRA W+ L + V + + Sbjct: 149 REACVKRFRELSATAPTTANQVFRNLRALCNWARETNVAPDGSYPILPINPVVQAFKSVT 208 Query: 263 PVSASKADDCLQKEQLKSWFSAVRSLNNP--------IASAYLQVLLLTGARREEIASLR 314 ++ + ++ + ++ + +N A+ + L+LTGAR E ++L Sbjct: 209 WNKEVTREEFVPLAKVGAVWNMLAERSNAQIYTTADVTAAHLVMFLILTGARIGEGSALH 268 Query: 315 WSDVDFKWSSMRIKDKIEGER---IIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKS 371 W DV IPL+ + LL + D E +VF S + + Sbjct: 269 WKDVRLDDEVPSFTFTQTKNHNEVTIPLSTQLHALLAARYSARRPD---EEYVFPSRTGT 325 Query: 372 G--KIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAE 429 + + R R +A L H+ H LRR+F +A V + H P + Sbjct: 326 REPHMQDARGTMQRVSKIAGL-HLHNHDLRRTFLAIAIECGVEMWKAEILTNHLPQTVTL 384 Query: 430 KHYRR-RPLDLLRKWHEKIETWILNEAGITIKNNV 463 KHY + R L L+ +++ WI +A + NV Sbjct: 385 KHYTQTRDLRYLQADTQRVADWITKQAQVASGQNV 419 >UniRef50_UPI0001AF6377 prophage PSPPH01, site-specific recombinase phage integrase family protein n=1 Tax=Pseudomonas syringae pv. oryzae str. 1_6 RepID=UPI0001AF6377 Length = 393 Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats. Identities = 74/435 (17%), Positives = 132/435 (30%), Gaps = 52/435 (11%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGA-KAFVFQSVYAGKTLRMTIGNI 89 T ++R L D+ L T G K + ++ AGK IG+ Sbjct: 1 MPLTAVKIRHAKPGPA--PIKLTDSG--GLFLEVTPGGNKLWRYRFRLAGKENTYAIGSY 56 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 D + DARAE + L+ G +P + A + + TF V E+++++ Sbjct: 57 PDLSLSDARAERDAARELVKLGRNPAHVRQTVKA------QQLSENSNTFKVVAEEWIEK 110 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 + K + ++ D + PL E+T I Sbjct: 111 RLANRTLKYRDQIRRAFVND----------------------VYPKIGRFPLREITAAQI 148 Query: 210 AAWLSTERQNRPTVTAH-AYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 ++ + T A + + + + + VR + Sbjct: 149 LVIITQMDKRDATTLALMVRQWISSVFCYGVVTLRADSDPAA------AVRGAISRKDVN 202 Query: 269 ADDCLQKEQLKSWFSAVRSL-NNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI 327 + E+L +F AV + L +L L R E+ WS+ D + I Sbjct: 203 HSRPMNLEELAEYFLAVGKYGGHRGTVIALYLLPLLFVRTVELRLAEWSEFDLDKAIWII 262 Query: 328 K---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRA 384 K + ++PL LL L + +F + I + NRA Sbjct: 263 PSGRMKRKRPHMVPLPERAIALLRELR-----SLTAGNLLFPGMKHPSQPIS-ATTLNRA 316 Query: 385 LVLAELPHISLHGLRRSFGTLAEWVE-VPTGIVAQIMGHKPSALAEKHYRRR-PLDLLRK 442 L +L H R + T + + + + HK S + Y D K Sbjct: 317 LEYMDLRGWHCHDFRATASTHLYESQLWRSEAIEMQLSHKESDKTKAAYNHAKYWDERSK 376 Query: 443 WHEKIETWILNEAGI 457 + + Sbjct: 377 MMVWWGHRLEPLIAV 391 >UniRef50_A6F4S5 Putative integrase n=1 Tax=Marinobacter algicola DG893 RepID=A6F4S5_9ALTE Length = 437 Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 76/433 (17%), Positives = 136/433 (31%), Gaps = 53/433 (12%) Query: 33 FTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNIND 91 T + R+ K T AD LA SG+K + ++ GK T+G Sbjct: 2 ITDTKARKAKA----KDTTYRLADSGGLALEIRPSGSKFWRYRYRLHGKAGMYTVGEYPT 57 Query: 92 WKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELR 151 I +ARA + + G P K ++AE + QA T ++++ + Sbjct: 58 ITISEARAIRDWAKKCVANGEAPAEVKKRELAERRAEQAN------TLEEVGKEWIARNK 111 Query: 152 TGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAA 211 G S R + AD +L + ++TP + A Sbjct: 112 AGWSVYYHRQVTRMLEAD----------------------IWPNLGKKGIRDITPAQMLA 149 Query: 212 WLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADD 271 L + PTV + + L A + + + +R + +K Sbjct: 150 ELQRVEERAPTVAVNLKQWLAAIYRHAIATLRADNDPTA------PLRGAIKKPKAKHKP 203 Query: 272 CLQKEQLKSWFSAV----RSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFK--WSSM 325 ++ A+ ++ I +++L LT AR E+ S RW D + + Sbjct: 204 SYNLDEFGKLCRAIWPKEGAIAYRITEIAIRLLALTMARTVEVRSARWDQFDLESEEPTW 263 Query: 326 RIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHN 382 I K ++PL+ ELL L + F + + + + + + Sbjct: 264 TIPGEKMKRGVTHLVPLSSQAVELLREL----EGLTGNRPYCFPNLRQPTEPMSATTINR 319 Query: 383 RALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRR-PLDLLR 441 L S H R + TL V + + H + Y L R Sbjct: 320 VLERLGYGGLFSGHAFRTTASTLLNNYGFDGDWVERQLAHTEENKSRASYNHAEYLYQRR 379 Query: 442 KWHEKIETWILNE 454 + + Sbjct: 380 IMLQWWADLVDTL 392 >UniRef50_Q48NQ4 Prophage PSPPH01, site-specific recombinase, phage integrase family n=2 Tax=Pseudomonas RepID=Q48NQ4_PSE14 Length = 391 Score = 250 bits (640), Expect = 6e-65, Method: Composition-based stats. Identities = 69/429 (16%), Positives = 142/429 (33%), Gaps = 52/429 (12%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTIGNI 89 T ++R+ GK + L D+ L T G+K + ++ AGK IG Sbjct: 1 MALTDLKIRQAK--PGKTSSKLTDSG--GLYLEVTTGGSKLWRYRFRLAGKENTYAIGAY 56 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 + + DAR E + L+ +G +P + + A + + + TF + ++++++ Sbjct: 57 PEVSLSDARTERDAARDLVKSGRNPAHVRQTEKA------QQLTENRNTFKIVSQEWIEK 110 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 + K + ++ D + LPL E+T + Sbjct: 111 RLAQRTQKYRDQIERAFVND----------------------VYPRIGRLPLREITAAQV 148 Query: 210 AAWLSTERQNRPTV-TAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 ++ + T + + A + + VR + + Sbjct: 149 LEIITAMDRRNATTLALMVRQWISAVFCYGVATLRADSDPAS------AVRGAIRRNEVN 202 Query: 269 ADDCLQKEQLKSWFSAVRSL-NNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI 327 + +L+ +F AV++ + L +L + R E+ WS+ D + I Sbjct: 203 HSRPMSLIELREYFRAVKTYGGHRRTVIALYLLPILFVRTIELRLAEWSEFDLDAALWTI 262 Query: 328 K---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRA 384 K ++PL LL L + +F + I + NRA Sbjct: 263 PARRMKKRKIHLVPLPESALALLRELREI-----TAGNLLFPGMRHPKEPIS-ATTLNRA 316 Query: 385 LVLAELPHISLHGLRRSFGTLAEWVE-VPTGIVAQIMGHKPSALAEKHYRR-RPLDLLRK 442 L +L H R + T E + ++ + H ++ Y L + Sbjct: 317 LEYMDLKGWHCHDFRATASTHLYESELWSSDVIEFQLAHVEQKKSKAAYNHASYLPARKA 376 Query: 443 WHEKIETWI 451 + + +I Sbjct: 377 LMQWWDNYI 385 >UniRef50_A6VC70 Integrase n=11 Tax=Proteobacteria RepID=A6VC70_PSEA7 Length = 395 Score = 250 bits (639), Expect = 7e-65, Method: Composition-based stats. Identities = 74/427 (17%), Positives = 140/427 (32%), Gaps = 51/427 (11%) Query: 33 FTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNIND 91 T R ++ L D L +G KA+ ++ AGK +G+ Sbjct: 2 LTDAHCRAAK--PKEQLYRLND--FRGLYLEVKPNGVKAWRYRFKLAGKGSWFALGDYPS 57 Query: 92 WKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELR 151 + DAR + + L+ GI+P + V+ + E A TF +++L Sbjct: 58 VSLADARDKCEEARKLVKQGINPVQNRQVERIKREQDSAN------TFEAVAKEWLA--- 108 Query: 152 TGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAA 211 + + +++ R S+ +P+ ++TP ++ Sbjct: 109 -------LKDWEEVTKRRRLDMLQR--------------VVFPSIGKMPVRQITPAHVLD 147 Query: 212 WLSTERQNR-PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKAD 270 LS + PTV A A R + + + + + VRK +P + ++ Sbjct: 148 ILSKTAKRGAPTVAAEAKRTMSGIFELAVATLRADND------PVWPVRKALPANKTQHK 201 Query: 271 DCLQKEQLKSWFSAVRSLNNPIASAY-LQVLLLTGARREEIASLRWSDVDFKWSSMRIK- 328 L Q+ + + + +Q++ T AR E A W++ D + I Sbjct: 202 TALTTAQIGKLLTDFDNHRCGYQVNFCIQLMWWTLARPGEAAEAEWAEFDLDKALWSIPA 261 Query: 329 --DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALV 386 K E ++PL E+L L ++ +F K + S Sbjct: 262 RRMKARREHLVPLPRQAVEMLRRLHAISGDRMH----LFPGRDDRNKPMSAHSIRQALKA 317 Query: 387 LAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRR-PLDLLRKWHE 445 L S HG R + T + + + H + Y LD R+ + Sbjct: 318 LGWSGTYSPHGTRTTGSTRLNEMGYRPDAIEAQLAHAEPNSVRRTYNHATYLDERREMMQ 377 Query: 446 KIETWIL 452 + Sbjct: 378 AWADKLE 384 >UniRef50_C6MJ55 Integrase family protein n=2 Tax=Betaproteobacteria RepID=C6MJ55_9PROT Length = 371 Score = 250 bits (639), Expect = 9e-65, Method: Composition-based stats. Identities = 171/377 (45%), Positives = 234/377 (62%), Gaps = 22/377 (5%) Query: 92 WKIDDARAEARRLQTLIDTGIDPRIAKAVK----IAEAESLQAESRKTKVTFSVAWEDYL 147 W I +A+ EARRLQT+ID G DPR KA + A + +A+ + VT AW++Y+ Sbjct: 4 WTIGNAQIEARRLQTIIDQGNDPREVKADQYAAKTAATAAKKAQEEREIVTVGQAWKEYV 63 Query: 148 QELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPD 207 + +S +I DH + GG+++KR + T G LA+L + L +LTP+ Sbjct: 64 TARKP--------LWSELHIRDHEKVMQAGGDARKRSKKLTEPGSLATLAKIRLVDLTPE 115 Query: 208 YIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSAS 267 + W TE RPT A RLLRAF+ W Y+ I+ + AQ+ + R+ + + Sbjct: 116 LVTEWAQTEAMTRPTRARLALRLLRAFLNWCGRHSTYKAIVTSNPAQNNDARESLGKAKV 175 Query: 268 KADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI 327 K D LQ+EQL +WF A++ + NP+ SAYLQ+LLLTGARREEIASLRW D+DF+W S+ I Sbjct: 176 KHD-VLQREQLPAWFKAIKQIQNPVISAYLQILLLTGARREEIASLRWQDIDFQWKSLTI 234 Query: 328 KDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNS-KSGKIIEPRSAHNRALV 386 DK++ RIIPLTPYV+ LL+ L + WVF S S SG++ +P AH +A Sbjct: 235 NDKVDDFRIIPLTPYVANLLSTLTRR-------NEWVFSSPSAASGRLTDPSIAHRKACA 287 Query: 387 LAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEK 446 +A L ++LHGLRRSF +L EW+E+P+GI AQI GHKP + E++Y RRPLDLLR WH K Sbjct: 288 IAGL-DLTLHGLRRSFASLCEWIEMPSGIAAQIQGHKPQGVREQNYIRRPLDLLRVWHVK 346 Query: 447 IETWILNEAGITIKNNV 463 IE WIL EAGI + Sbjct: 347 IEEWILQEAGINFVSTQ 363 >UniRef50_B7XGJ8 Integrase n=9 Tax=root RepID=B7XGJ8_PSEPU Length = 419 Score = 250 bits (639), Expect = 9e-65, Method: Composition-based stats. Identities = 83/442 (18%), Positives = 159/442 (35%), Gaps = 52/442 (11%) Query: 32 KFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSG-AKAFVFQSVYAGKTLRMTIGNIN 90 K T + ++ P + D L R ++ K++VF+ + A + + +G Sbjct: 3 KLTPKFVKDVDQPGSYQ-------DGRGLILRVSATLRKSWVFRYMLAKQRHDLALGTFP 55 Query: 91 DWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQEL 150 + DAR EA + + I G+DP +A A +A T TF + E Y++ Sbjct: 56 ALSLRDARLEADKYRLDIARGVDPAAERAKVKA----AKASRTTTSHTFRASAERYIRTH 111 Query: 151 RTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIA 210 + S K + + Q + ++ ++E+ D I Sbjct: 112 SSSWSKKHHQQW----------------------QNSLTKHVYPAIGGFRIAEVDTDDIL 149 Query: 211 AWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKAD 270 L+ P + + + K QG P + K++P + Sbjct: 150 DVLTPIWSKIPVTANRVRNRIELVLDAAKALKLRQGENPARWRGHLD--KLLPKQSHTVV 207 Query: 271 DCLQKEQLK--SWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIK 328 L+ + + SL+ A ++ +LT R +E++ +W ++D++ I Sbjct: 208 PFPSPTPLRTAELLARLDSLDGSAAR-AVEFAILTATRNQEVSGAQWPEIDWEEKIWYIP 266 Query: 329 ---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRAL 385 K +PLT + E+L + W+F ++ ++G I P +A R L Sbjct: 267 AERMKAGKAHRVPLTEQMLEVLR------QQVGKHDKWIFLNSWRTGPI--PGNAMARVL 318 Query: 386 VLAELPHISLHGLRRSFGTLAEWVEVPTGIV-AQIMGHKPSALAEKHYRRRP-LDLLRKW 443 ++ + HG R +F T A V + H ++ E Y R LD R Sbjct: 319 DQLQVDGVVPHGFRSTFRTWAAEETDHQREVCEMALAHTLNSKVEAAYNRGDLLDKRRAL 378 Query: 444 HEKIETWILNEAGITIKNNVDM 465 + +++ A D+ Sbjct: 379 MKDWGDFLVANAPQVQGEVSDL 400 >UniRef50_A3D8Y2 Phage integrase family protein n=4 Tax=Shewanella RepID=A3D8Y2_SHEB5 Length = 376 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 77/430 (17%), Positives = 144/430 (33%), Gaps = 60/430 (13%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTI 86 + K + P +K T +D RA SG + + + Y G I Sbjct: 1 MPSIKLQQSMIDNLPTP--QKITVFYDKYFPAFFMRAYPSGIRCYYVRFQYQGLRQLHVI 58 Query: 87 GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDY 146 GN ND +DDAR EAR+ + G+ +T E++ Sbjct: 59 GNANDITLDDARLEARKHIDALRYGV-----------------VREPAPSLTLCAFAEEF 101 Query: 147 LQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTP 206 T Q + L ++PL+ LT Sbjct: 102 FPRYARHWKPSTL----------------------LNSQRGFTRHIAPVLGDVPLAALTR 139 Query: 207 DYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSA 266 +I W + LL ++ + + AQ + + Sbjct: 140 QHIEQWFDGMHA-SKGMANRLLPLLSVMMQQAEVYEYR-------PAQSNPCKGFKRYKS 191 Query: 267 SKADDCLQKEQLKSWFSAVRSLN--NPIASAYLQVLLLTGARREEIASLRWSDVDFKWSS 324 + ++ L +E+LK + A+ S +P+A L++L+LTG R E+ S++W+ D++ Sbjct: 192 THSERYLSEEELKRLWLALDSHEKASPVAVMVLRLLILTGCRCNEVCSVKWA--DYRQGH 249 Query: 325 MRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRA 384 + D G + + L+ + ELL+ Q + S S+ Sbjct: 250 WYLPDSKTGAKTVFLSSFARELLSDWPQVSEHLFWHQ-----SPSQPFTPARLDRFWRPF 304 Query: 385 LVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWH 444 L + +H LR ++ ++A + + +++GH K Y +++ Sbjct: 305 RETIHLNDVRIHDLRHTYASIAVKHNINILTIGRLLGHALPETTLK-YTHLAKRDVQQAA 363 Query: 445 EKIETWILNE 454 + I E Sbjct: 364 NVVSQLIAGE 373 >UniRef50_A9VZC1 Integrase family protein n=3 Tax=Alphaproteobacteria RepID=A9VZC1_METEP Length = 412 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 67/432 (15%), Positives = 139/432 (32%), Gaps = 56/432 (12%) Query: 29 SRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIG 87 + T ++R +P D + L SG+K ++ +++ G+ + +G Sbjct: 18 PDKALTTVQVRALKVPGR-----YADGN--GLYLVVEPSGSKRWLLRTIVQGRRRDIGLG 70 Query: 88 NINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYL 147 + +AR +A + L G DP + ++R T TF+ A E Sbjct: 71 GAGLVTLAEAREKALAYRKLARDGGDPLAERR-----------KARATVPTFAEAAEQVH 119 Query: 148 QELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPD 207 +E + + + N L + ++ Sbjct: 120 EEHKASWKNPKHAAQWITTLRTYAN---------------------PHLGARRVDQIETP 158 Query: 208 YIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSAS 267 + LS + + + + W+ G + + Sbjct: 159 DVLRALSPIWLTKGETARRVRQRIGTVLDWAKAAGHRTGD---NPVESVAKGLPKQGERD 215 Query: 268 KADDCLQKEQLKSWFSAVRSLNN-PIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMR 326 + L ++ ++ + ++S ++ A + L+LT AR E+ W ++D + Sbjct: 216 EHHAALPYAEVPAFVTRLQSSDHGEAARLAFEFLILTAARTSEVLRAEWREIDEAEALWT 275 Query: 327 IK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNR 383 + K E +PL+ E++ ++F S + Sbjct: 276 VPAARMKAGREHRVPLSKRSLEIVR----RAKLLAGDSAFIFPGRSTGKPMSN--MVFLM 329 Query: 384 ALVLAELPHISLHGLRRSFGTLAEWVE-VPTGIVAQIMGHKPSALAEKHYRRRP-LDLLR 441 AL +L ++ HG R SF A +P + + H E YRR L R Sbjct: 330 ALRRMKLT-VTAHGFRSSFRDWAAEATSLPREVAEMALAHTIENRVEAAYRRGDLLAKRR 388 Query: 442 KWHEKIETWILN 453 + E+ T++ + Sbjct: 389 EMMEQWSTFVAS 400 >UniRef50_D0KY10 Integrase family protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KY10_HALNC Length = 427 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 63/433 (14%), Positives = 130/433 (30%), Gaps = 30/433 (6%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAGKTLRMTIGNI 89 T ++ K + D L T G K + + GK + +G Sbjct: 1 MALTDTAIKALK--PESKPYKVTDE--KGLYLFVTPAGGKLWRLDYRFEGKRKTLALGGY 56 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 D + AR + LI G DP + + + E + E +Q Sbjct: 57 PDVNLKQARVYRDEARQLIANGTDPAELRKAEKTTITESRREEAEAVK-----IEAMIQA 111 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 + ++ ++ + + + + + A L P++++T + Sbjct: 112 GEA--LPGSFEEIGDEWVNMYL--ADKSEKYRNKVINRLKAEVYPYLGRAPVADVTAPMV 167 Query: 210 AAWLSTERQNR-PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 L + + ++++ + + D+ N Sbjct: 168 LKVLQRIEARGIIESAHRVKQNIGQILRYAIATGRRE---LFDVTMALNKAIAPMPKDKN 224 Query: 269 ADDCLQKEQLKSWFSAVRSLN-NPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI 327 + + + + +PI A L + R E+ ++W+D+DF+ R Sbjct: 225 HAAPTEPKDIAPLLRIMAGYRGSPITRAALTIAPCVFVRIGELRHMQWADIDFETFEWRY 284 Query: 328 KDKIEG-ERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALV 386 G E I+PL V L L +VF + + + N AL Sbjct: 285 TASKTGQEHIVPLARQVVAALIELQ----PLTGHSRYVFTGARSDTRPMSENTV-NGALK 339 Query: 387 LAELP---HISLHGLRRSFGTLAEW-VEVPTGIVAQIMGHKPSALAEKHYRRR-PLDLLR 441 + ++ HG R T+ E ++ + H + Y R L+ R Sbjct: 340 RLGIDTQTELTGHGFRAMARTVLEEVHNFRPEVIELQLAHAVRDPLGRAYNRTKHLETRR 399 Query: 442 KWHEKIETWILNE 454 K + ++ Sbjct: 400 KMMQVWADYLDEL 412 >UniRef50_C7JAN4 Phage integrase n=17 Tax=Acetobacteraceae RepID=C7JAN4_ACEP3 Length = 404 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 69/428 (16%), Positives = 139/428 (32%), Gaps = 48/428 (11%) Query: 33 FTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSV--YAGKTLRMTIGNIN 90 T ++ L D L A AK++ F+ + M +G+++ Sbjct: 9 LTARQVSALKGGS------LCDGG--GLWLVAQGAAKSWFFRFTSPISNTRREMGLGSVH 60 Query: 91 DWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQEL 150 D + + R +A + L+ G+DP + A+ +++ +TFS + Y++E+ Sbjct: 61 DLSLAEVRRKATEARHLVAAGLDPIDERRKLKAQR------KKESGLTFSDIAKRYVKEM 114 Query: 151 RTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIA 210 G T + H+ ++ +SE+ + + Sbjct: 115 APGWRNARSSTVWTSSLERHV---------------------FPAMGGKLVSEIETEDVL 153 Query: 211 AWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVS--ASK 268 A L + + + ++ G P P + ++ Sbjct: 154 AVLRPIWKTTTETADRVRGRIERILDFARTHGWRDGENPARWRGHLANILPKPSAVAKAR 213 Query: 269 ADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIK 328 + ++ + + + I+ ++ LT AR E+ WS++D I Sbjct: 214 HLPAVNRKDIGKVMAKLAQAEG-ISPKAVRFACLTAARSGEVRQAVWSEIDLVTKIWTIP 272 Query: 329 ---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRAL 385 K E +PL+ +L + D VF K G+ + Sbjct: 273 AHKMKAGKEHRVPLSAGAIAVLQEVLPFR--DKRAGDLVFPG-GKRGRPLSDVVLSKALH 329 Query: 386 VLAELPHISLHGLRRSFGTLAE-WVEVPTGIVAQIMGHKPSALAEKHYRRRPL-DLLRKW 443 A +++HGLR +F A + P + + H S E YRR L + R+ Sbjct: 330 SAAGTKDVTVHGLRSTFRDWAAEETDYPGEVAEMALAHTISDKVEAAYRRGDLFNKRREM 389 Query: 444 HEKIETWI 451 + Sbjct: 390 MTAWNDKM 397 >UniRef50_A5G635 Phage integrase family protein n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G635_GEOUR Length = 437 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 65/441 (14%), Positives = 149/441 (33%), Gaps = 63/441 (14%) Query: 32 KFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNIN 90 FT ++ + + + A R +G K + + + GK ++ +GN Sbjct: 17 PFTDRFIKSLK--PESEMYQVR--EGRGFAIRVLPTGVKTWYYIYTFNGKRRQLNLGNYP 72 Query: 91 DWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAW-EDYLQE 149 D ++DA L+ G+DP + + + ++T + YL E Sbjct: 73 DKSLEDAHKVYLESAALVKNGVDPMD-------KPVAADPPPPQVELTVRRLAVDLYLDE 125 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 ++ + A L + + +++ Sbjct: 126 WSKIHHSERWH---------------------YNNKKALEADVLPAWGDRLAADIRRKDA 164 Query: 210 AAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSAS-K 268 L + P + + R ++ ++ + + D + + +P Sbjct: 165 VEILELVAKRAPGQARNVLKAARGMYTYAVDRELLE----YNPFTDIKISRTIPKMQPMS 220 Query: 269 ADDCLQKEQLKSWFSAVRSLN-NPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSM-- 325 D L ++++K ++A+ + L+++L+TG R E+ + +++ KW ++ Sbjct: 221 RDRELSEKEIKHLWNAIDEGGGSDGTKRALKLILITGQRPGEVVGMHRQEIEGKWWTIPW 280 Query: 326 -RIKDKIEG--ERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHN 382 RIK + + I L+P L+ + +G++F S + E +H+ Sbjct: 281 QRIKTRKRRQEDHRIYLSPLAMSLI----------GDGKGFIFSDPSGENSMTENALSHH 330 Query: 383 RALV--------LAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRR 434 LP + H LRR+ T + I+ I+ H ++ + R Sbjct: 331 VRKDIPDTVKKPYYGLPRWTPHDLRRTAATRLSRIGASDEIIDVILNHAKKGVSGIYNRN 390 Query: 435 RPLDLLRKWHEKIETWILNEA 455 + ++W K + Sbjct: 391 KYDKEKQQWLTKWSQHLEKLI 411 >UniRef50_A1WLK0 Phage integrase family protein n=4 Tax=Burkholderiales RepID=A1WLK0_VEREI Length = 421 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 68/439 (15%), Positives = 136/439 (30%), Gaps = 57/439 (12%) Query: 33 FTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNIND 91 T + + P K++ L DA L SG+K + ++ + G+ R+ +G D Sbjct: 2 LTDKHCKNALCPADKQRVRLSDAA--GLYLEVSPSGSKRWFWKYRFDGREKRLALGVYPD 59 Query: 92 WKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELR 151 + DAR + G+DP + + ++ S TF V ++ + Sbjct: 60 VPLKDARTARDDARKQHQRGVDPVLERQLERLSNRSDPEA------TFEVVAREFHTTKK 113 Query: 152 TGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAA 211 S + R + R D L LPL +++ + Sbjct: 114 RSWSLEYARRWLERLEKD----------------------IFPWLGKLPLKQISAPMLLQ 151 Query: 212 WLSTERQNRPTVTAH-AYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKAD 270 L H ++ + DL PV Sbjct: 152 ALRRVEARGARELPHSLLEACGQTFRYGIATGRCDRNSAADLRGAL-----RPVLTKHMA 206 Query: 271 DCLQKEQLKSWFSAVRSLNNP-IASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKD 329 L+ ++++ A+R + L + L R I + W +VD + S +I Sbjct: 207 AILEPKEVRELMLAIRGYDGQLTTRVALYLSALLFQRPGNIRQMEWEEVDLEASMWKIPS 266 Query: 330 KI----------EGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRS 379 + ++PL +L L + +VF + + + + Sbjct: 267 EKMKRKKSEKLNGRPHLVPLARQAVAVLRDLQ----PLTGRGRYVFPAVVSPKRPMSENT 322 Query: 380 AHNRALVLAELPH--ISLHGLRRSFGTLAEW-VEVPTGIVAQIMGHKPSALAEKHYRRRP 436 AL + ++ HG R TL + + + ++ + H+ S Y R Sbjct: 323 V-RVALRRMGFDNDTMTPHGFRAMARTLLVEWLNISSDVIEVQLAHRKSGPLGSAYDRAE 381 Query: 437 LDLLRK-WHEKIETWILNE 454 + R+ + ++ Sbjct: 382 FMVQRQTMMQSWADYLDAL 400 >UniRef50_A4Y8Q0 Phage integrase family protein n=2 Tax=Shewanella RepID=A4Y8Q0_SHEPC Length = 443 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 81/434 (18%), Positives = 161/434 (37%), Gaps = 66/434 (15%) Query: 33 FTFERLRRFTLPEGKKQTFLWD----ADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIG 87 FT + + G+K+ + D + L SG K F F+ + GK + +TIG Sbjct: 7 FTKRAFEQLEI--GQKRFRIADFGHRDSINGLILDVFPSGKKVFRFRRKHLGKDVTVTIG 64 Query: 88 NINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYL 147 I++AR +A+ + + G++P AK + EAE +A S + F +++ Sbjct: 65 EFPHLTIENARKQAKHIAVDLAEGVNPNEAKRLAKQEAERKEALSISVQQLFDSFEAEFM 124 Query: 148 QELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPD 207 +++TG +HI + +LP+ +T Sbjct: 125 VKIKTGERRLNSLKDIQSTWKNHIQ---------------------PRIAHLPVESITTV 163 Query: 208 YIAAWLS-TERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSA 266 L +N V LL++ Q ++ ++A Sbjct: 164 EAENLLKLIITKNSAAVRNKCLTLLKSMFN---------------EQQINPFGRIKKLAA 208 Query: 267 SKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMR 326 K + L + ++++ ++ P+ + +LLLTG R+ + S+ W ++D + Sbjct: 209 VKRERILNQHEVRALLESL-EFEPPLYRDVVMLLLLTGQRKSCVFSMEWREIDHQRGMWI 267 Query: 327 IKDKI---EGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRS-NSKSGKIIEPR---S 379 I + +PLT V +L + + + +VF + S SG I E S Sbjct: 268 IPTSKIKSKKPHAVPLTKEVMAILE---RRSHEAAHGVKYVFPAERSHSGHITENAGKGS 324 Query: 380 AHNRALVLAEL-----------PHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALA 428 R A L ++++H LRR+ + + ++++GH ++ Sbjct: 325 FWYRITERAGLRSPEKSATAKEDNVTIHDLRRTIASWSVMRGGNIQTTSKLLGHSDISIT 384 Query: 429 EKHYRRRPLDLLRK 442 Y ++ +R Sbjct: 385 ASTYAHLDVENVRA 398 >UniRef50_B3E293 Integrase family protein n=1 Tax=Geobacter lovleyi SZ RepID=B3E293_GEOLS Length = 409 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 92/440 (20%), Positives = 168/440 (38%), Gaps = 55/440 (12%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAG--KTLRMT 85 + K T L+ + Q +D ++ RAT A F ++ G K + Sbjct: 1 MPSLKITKANLKEI-VKPTAGQVDYFDTELAGFGVRATKEALTFFVRARQRGTSKKPFIH 59 Query: 86 IGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWED 145 IG + + ARA+A + GI+P + K+ +T + Sbjct: 60 IGAFGLYTCEQARAQATGYLQKLKEGINPHPDRQPKLV------------TITVADLHRQ 107 Query: 146 YLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 Y+ +T ++ T R Y+ ++ +H L LP +T Sbjct: 108 YMSTKKT-LAPATIRQYA-AWMENH----------------------FKDWLTLPADTIT 143 Query: 206 PDYIAAWLSTER-QNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYN-VRKMVP 263 + L N + +A +LLR+ ++ + G+I + VR+ Sbjct: 144 GSMVLERLELMEITNGKSQAINAVKLLRSLFRFGL--ALHPGVIHRNPVDGVREVRERDW 201 Query: 264 VSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWS 323 + ++ E L WF AV + +NP Y+ +LL TG RR E A L+WSD+DFK Sbjct: 202 AKKKRRITFIKPEDLPIWFKAVNAYDNPKGRDYMLLLLYTGLRRNEAARLKWSDIDFKRK 261 Query: 324 SMRI-KDKIEGER------IIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIE 376 + +K GE+ +P++ + +LL + + ++F + + Sbjct: 262 AFTFTPEKKRGEKPEDDQVTMPMSEQLYKLL----LKRRAAGYENEYIFPGKHPAPFLSN 317 Query: 377 PRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRP 436 P + + + + H LRR+F T+AE ++VP + ++ H Y + Sbjct: 318 PDNYKRDIIAASGVQ-FCFHDLRRTFITIAEGLDVPHYSLKALLNHSMGNDVTGGYIQIT 376 Query: 437 LDLLRKWHEKIETWILNEAG 456 + LR+ +KI I Sbjct: 377 TERLREPMQKIADRITELIA 396 >UniRef50_A3VQY7 Phage integrase n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VQY7_9PROT Length = 421 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 77/454 (16%), Positives = 142/454 (31%), Gaps = 69/454 (15%) Query: 29 SRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYA----GKTLR 83 + K T + K +WD ++ R +G KA++ K R Sbjct: 6 KKVKITKRVVDLA--DPKKSPYIIWDKELPGFGLRVAANGRKAYIVSYRVGVGRGAKQRR 63 Query: 84 MTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAW 143 ++I N + AR EA+ G D R A K +T + A Sbjct: 64 VSIAASNTMTCEMARKEAQVYLANARLGEDRREE---------IDAAAKAKADITVAKAI 114 Query: 144 EDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSE 203 E + E K R + + A + ++ N L E Sbjct: 115 EIWHAEAAHRNRRTGKA---------------RDPRNIRNEMSRMDAHLIPAIGNKKLRE 159 Query: 204 LTPDYIAAWLSTE------------------RQNRPTVTAHAYRLLRAFIKWSNYQKKYQ 245 LT + ++ + + Sbjct: 160 LTRRDVELLRDDITAGRTAVVQKTKKHGVRRATGGTGTAKRTMVSFKSVLAYMKDIGFVD 219 Query: 246 GIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASA----YLQVLL 301 + +L K + L + + +++LL Sbjct: 220 QNVAANLRLAP---------DGKKERYLSVAEAHRLGKCLDEWEQMDRRMTGITIIRLLL 270 Query: 302 LTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKE 361 +TGAR +EI L+WS++DF S R ++ G I P++P V ++L L + + Sbjct: 271 MTGARTKEIEELKWSEIDFDRSFFRFEETKSGRSIRPISPQVLDILKGLPRLHPT----- 325 Query: 362 GWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMG 421 WVF +N+ +G ++ A LP + H LR SF + A + ++ ++G Sbjct: 326 -WVFLNNAGTGPYCGTQAVWRLVREEAGLPDVRKHDLRHSFASFALANGLSLPVIGTLLG 384 Query: 422 HKPSALAEKHYRRRPLDLLRKWHEKIETWILNEA 455 H ++ Y + + + ++N Sbjct: 385 HSRPETTQR-YAHLSDRHAMEAAKSVGLAVMNAL 417 >UniRef50_Q2G674 Phage integrase n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2G674_NOVAD Length = 423 Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 71/452 (15%), Positives = 149/452 (32%), Gaps = 64/452 (14%) Query: 29 SRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTIG 87 ++ T ++ Q L D V L R SG K ++ + GK L +TIG Sbjct: 3 NKVGLTDAKIAGLKA-PAAGQIELADGIVPGLRLRMGASGIKTYILRKRVQGKWLNVTIG 61 Query: 88 NI-NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDY 146 + + AR +AR L ++ G IA + + K T + +E Y Sbjct: 62 RHGPSFTLAHARKKARDLLVDVEQGK--------SIARKAGAKRKGSKGVGTVAELYETY 113 Query: 147 LQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTP 206 L + G + R +I + + +T Sbjct: 114 LAQQIEGKKRSARE--FDRVFRKYIE---------------------PEIGDRLADSITR 150 Query: 207 DYIAAWLSTER-QNRPTV---TAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMV 262 ++ ++ + YR L F W+ + ++ +P + +D Sbjct: 151 SDVSRFVEKIAFERGKETLTMARIVYRHLSTFYTWALTRLEH---MPANPCRD----AWR 203 Query: 263 PVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKW 322 P D L +L + + + P +Q+L+LT RR E+ + DFK Sbjct: 204 PKRNEPRDRVLSDRELAALWQSAVEDGYPF-GHLVQMLILTAQRRGEVLDAACDEFDFKA 262 Query: 323 SSMRIKD---KIEGERIIPLTPYVSELLNVLAQSPNSDVNKEG-----WVFRSNSKSGKI 374 + K ++P++ ++ + ++ D + + + + + Sbjct: 263 KVWTVPGDRAKNGKANVVPISAQALGVITEIFRAAGIDPDDAHKQSQILLASKVTNTNSV 322 Query: 375 IEPRSAHNRAL----VLAELP--HISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPS--- 425 A R H ++H +RR+ T + + +P + ++ H+ Sbjct: 323 SGLSKAWKRIRASVDEKLGYEAGHFTMHDIRRTVATGLQRLGIPLVVSEAVLNHQSGSAM 382 Query: 426 -ALAEKHYRRRPLDLLRKWHEKIETWILNEAG 456 +A ++R + + R+ ++ A Sbjct: 383 AGVAGVYHRHQYTNEKREALALWGKEVMQIAA 414 >UniRef50_Q2GBL9 Phage integrase n=3 Tax=cellular organisms RepID=Q2GBL9_NOVAD Length = 417 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 85/453 (18%), Positives = 160/453 (35%), Gaps = 63/453 (13%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAGK---TLR 83 ++ K + + FLWD D+ + T GA ++V Q G+ T R Sbjct: 1 MATGKISKRSIDALR--PNASNQFLWDTDLKGFGAKITPAGAISYVLQFRMGGREASTRR 58 Query: 84 MTIGNIND-WKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVA 142 TIG W ARAEA RL LI G+DP + A+ ++ + +A Sbjct: 59 YTIGAHGSPWTPTTARAEAERLLLLIGQGVDP-------------VDADKQRRREAVDLA 105 Query: 143 WEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLS 202 + +Y + R R I ++ L L Sbjct: 106 FANYAERFARSCKGDGWRRLVERAIRLYLT---------------------PVLGKKALP 144 Query: 203 ELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMV 262 + + + ++ + + +LR +W+ + DL + Sbjct: 145 AINRTDVVSVFDNMPADQVANRRNVFAVLRRLFRWAVSRG--------DLDRSPMEGMET 196 Query: 263 PVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKW 322 P + L ++L+ ++A + +++L+ TG RREE++ +RWS++ Sbjct: 197 PPPVKARERWLSDDELRLIWNAAPEC-HRCFGPIVRLLIATGQRREEVSGMRWSELSRTD 255 Query: 323 SSMRIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSG--KIIEP 377 + K IPL L+ + ++G VF +++ +G + Sbjct: 256 KLWTLPGDRTKNGEPNTIPLNDLAVAELDA--AAGGDKWPRKGRVFATSTGAGFTGYAKG 313 Query: 378 RSAHNRALVLAE---LPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGH---KPSALAEKH 431 + +R + LAE LP LH LRR+ T + + V + ++ H S +A + Sbjct: 314 KDKLDRLIELAEGEPLPPWRLHDLRRTLATNFQRLGVRFEVTEAVLNHVGGSRSGVAGIY 373 Query: 432 YRRRPLDLLRKWHEKIETWILNEAGITIKNNVD 464 R + R+ + + + N Sbjct: 374 QRHDWKEEKRQALDDWNSHLEQILMRPSPGNRQ 406 >UniRef50_B6QXT6 Phage integrase n=2 Tax=Pseudovibrio sp. JE062 RepID=B6QXT6_9RHOB Length = 416 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 76/456 (16%), Positives = 151/456 (33%), Gaps = 84/456 (18%) Query: 32 KFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSV-YAGKTLRMTIGNI 89 T + K+ FLWD+ + + SGAK F+ Q + G++ RM++G Sbjct: 3 NITKRTVDAA--SPATKKHFLWDSKLKGFGLQVMPSGAKTFIVQYRTHEGRSRRMSLGRY 60 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 + D AR A + + G DP + + E+++ T +V + Y+ + Sbjct: 61 GELTPDQARDLATNVLATVRNGDDPLLKR------------ENKRAAPTVNVLLDIYMSK 108 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 + R + + + L + L+ + I Sbjct: 109 HVQVHNKPKTMKDIERLLKRCVR---------------------SRLGLMKLNSVRRQDI 147 Query: 210 AAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKA 269 A + R P +L + VR + ++ Sbjct: 148 AKLHHSLRAT-PRQANQVLAVLSKAFNLAEVWGLR-------PEHSNPVRLVKRYKENER 199 Query: 270 DDCLQKEQLKSWFSAVRSLNNPIASAYLQV-----------------------------L 300 D L +E+L+ + + ++ L Sbjct: 200 DRFLSEEELQRLGRTLELADQEGLPWIIKAGKRSAKHLPKDVAKRKTPVNPRALCCLRLL 259 Query: 301 LLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERI-IPLTPYVSELLNVLAQSPNSDVN 359 L TGAR EIA+L+W +DF+ ++ + + ER P++ E+L+ + + Sbjct: 260 LYTGARLSEIATLKWKHIDFELATFALPSRKGDERKPHPVSSSAIEILSEFPRV-----D 314 Query: 360 KEGWVFRSNSKSGKIIEPR---SAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIV 416 +V + I +A R + A +P + +H LR + GT A ++ Sbjct: 315 GSPYVLPGCKDPTQPISIEVIENAWQRIRIHANIPDVRIHDLRHTVGTFAAQAGSNAFLI 374 Query: 417 AQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWIL 452 + ++ H+ + ++ +R E I I Sbjct: 375 SHLLRHRNVTITNRYVNHDAH-PIRVLSEAIGERIE 409 >UniRef50_B8GNQ7 Phage integrase family protein n=6 Tax=Proteobacteria RepID=B8GNQ7_THISH Length = 422 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 71/445 (15%), Positives = 140/445 (31%), Gaps = 51/445 (11%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMT 85 MA++ + ++ P K+ +L D L SG+K + ++ GK Sbjct: 1 MAMN--LLSARKVETI--PSQKEPYWLKDGGSLFLYV-TPSGSKLWRYRYRLGGKPAIYA 55 Query: 86 IGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWED 145 IG ++ AR E R + L+ G+ P + K V I+ + K + TF Sbjct: 56 IGKYPQVSLEAARTERDRARELVKKGVHPVVEKRVNIST------QLEKNENTFEPVARR 109 Query: 146 YLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 ++ + AD + + LP+S + Sbjct: 110 WMASNV----------QWSEGYADQVK-------------RTLENDVFPKVGKLPVSSIR 146 Query: 206 PDYIAAWLSTERQNR-PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPV 264 ++ + + PTV +L ++ ++ L + Sbjct: 147 TAHLRPVIKDVAERGAPTVAILIRQLCSQIFAYAAGEELCDSDPTALLKRSV------KR 200 Query: 265 SASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSS 324 + L +++ + S V + L+++ LT R E+ WS+ D + Sbjct: 201 PRVRHHPPLPWQEIPKFLSRVDDAGYRVTVIALRLMALTYVRTAELRKAHWSEFDLDSAM 260 Query: 325 MRIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAH 381 + K+ I+PL+ LL L ++ +F K G ++ + + Sbjct: 261 WTVPAGRMKMRDPHIVPLSKQAIVLLKEL----HTLTGGGKVLFPGFRKPGTVMSATTLN 316 Query: 382 NRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPS--ALAEKHYRRR-PLD 438 + S HG R + TL + P V + H + Y + Sbjct: 317 KVLERMGYGGQFSSHGFRSTATTLLGLLSYPENRVDLQLAHSKRKKDSSRAPYDHTKYIA 376 Query: 439 LLRKWHEKIETWILNEAGITIKNNV 463 + + + A N V Sbjct: 377 SRKIIMQDWADILDAMARGDSMNEV 401 >UniRef50_C7JFF4 Phage integrase n=8 Tax=Acetobacter pasteurianus RepID=C7JFF4_ACEP3 Length = 434 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 71/427 (16%), Positives = 147/427 (34%), Gaps = 43/427 (10%) Query: 32 KFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSV--YAGKTLRMTIGNI 89 + +L + K L D L T G++ + F+ GK +M++G+ Sbjct: 38 RLPPNQLSALKVS-RHKSGDLCDGG--GLWLVVTGGSRLWEFRFKSPVTGKRRQMSLGSA 94 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 + DAR +A + + + + +DP I + + A A + +TF+ Y++ Sbjct: 95 YSLSLADAREKAAKCRGMTENRLDPIIEREKEKA------ARELEKGLTFAEVAAQYIKA 148 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 T + H+ + ++ + Sbjct: 149 QTPAWKDHRSPAVWTSSLTQHV---------------------FPIFGEKSVRDVDTQDV 187 Query: 210 AAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVS--AS 267 L + + + + ++ Q+ +G P +V P Sbjct: 188 LTALRPIWTEKTETSGRIRGRIERILDYARVQQWREGENPARWRGHLSVMLPAPSKITKV 247 Query: 268 KADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI 327 + + + + A++S+N +A+ ++ LT AR E+ + WS++D + + Sbjct: 248 QHHKAAEWKDISEIMKALQSING-MAAKAVRFCCLTAARSGEVRNAVWSEIDLSEALWVV 306 Query: 328 K---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRA 384 K E +PL+ ++L + P+ D +F K G+ + + Sbjct: 307 PAEKMKAGREHRVPLSGDAVKVLQEV--LPHRDAVSGDLLFPGA-KRGRPLSDVAVSKAL 363 Query: 385 LVLAELPHISLHGLRRSFGTLAEWVEV-PTGIVAQIMGHKPSALAEKHYRRRP-LDLLRK 442 A +++HGLR +F A +V + + H + E Y R LDL R Sbjct: 364 HHAAGTKEVTVHGLRSTFRDWAGETKVCSREVAEAALAHAGKSKVEAAYFRSDLLDLRRP 423 Query: 443 WHEKIET 449 E+ Sbjct: 424 LMEEWAA 430 >UniRef50_B0TQV5 Integrase family protein n=1 Tax=Shewanella halifaxensis HAW-EB4 RepID=B0TQV5_SHEHH Length = 358 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 66/385 (17%), Positives = 141/385 (36%), Gaps = 38/385 (9%) Query: 71 FVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQA 130 F ++ + GK R +G+ + + DARA L+ + ++G+D + KA + Sbjct: 2 FQYRYRFEGKGRRYDLGSYPNLSLSDARACVPELKGITESGMDVKSVKASQKV------G 55 Query: 131 ESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSA 190 + K + +L + T + T+R Y T Sbjct: 56 KKTVLKPKLEDCMDLFLDKYVTSLRESTQRFY-----------------------RYTLN 92 Query: 191 GPLASLLNLPLSELTPDYIAAWLSTERQNR-PTVTAHAYRLLRAFIKWSNYQKKYQGIIP 249 + + P+ ++T A+ ++ P + + L+ + + + Sbjct: 93 KYIPNAFEQPVEDITRKEWYAYFDGVEESSTPHMANSLIKKLKTCLNFCKERDLI----- 147 Query: 250 GDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAV-RSLNNPIASAYLQVLLLTGARRE 308 D + + K V +++ D ++K+ RS + P +++++LTGAR Sbjct: 148 SDHSLNEIRTKSVGSASNTGDRTPSVVEIKAILEEFGRSKSYPTTVNVVRMIVLTGARCG 207 Query: 309 EIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSN 368 E+ ++ D++F + + L P + L ++ + +VF S Sbjct: 208 EVRCMQSKDINFDTGIWTVPKEKSKTNTRILRPLGLKALELVKWQVKTFGGFSDYVFPSA 267 Query: 369 SKSGK--IIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSA 426 S + + ++ S+H RRS TL VP I +++GHK Sbjct: 268 SYKNEIGPATINKMCRTIVKRMDIERWSVHDFRRSLSTLLTEDGVPLHITEKMLGHKLGG 327 Query: 427 LAEKHYRRRPLDLLRKWHEKIETWI 451 + + + ++ RK ++ E I Sbjct: 328 ILSVYNKSEYIEDQRKAYKVWEEMI 352 >UniRef50_C8KXV2 Prophage CP4-57-like integrase n=1 Tax=Actinobacillus minor 202 RepID=C8KXV2_9PAST Length = 406 Score = 247 bits (632), Expect = 6e-64, Method: Composition-based stats. Identities = 72/439 (16%), Positives = 152/439 (34%), Gaps = 52/439 (11%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSV--YAGKTL 82 MA +++ K + D L + G+K++ F + K Sbjct: 1 MAKKVHPLVDTEIKKAK--PEDKPYTMTDG--QGLFLIVSPTGSKSWRFNYYRPISKKRA 56 Query: 83 RMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVA 142 ++ +G + ARA + L+ GIDP+ + + T Sbjct: 57 KIALGMYPAITLSKARALRDEYKHLLANGIDPQEHCKQLELQKLQFKQN------TLFAI 110 Query: 143 WEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLS 202 E + Q+ T + KT +P L +LP+S Sbjct: 111 AEKWKQKKETEVKEKTLKPRWRML----------------------EKYIFPELGDLPIS 148 Query: 203 ELTPDYIAAWLSTERQNRPTVTAHA-YRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKM 261 E++P ++ + T +++ + ++ + ++A +NV Sbjct: 149 EISPLRLSNTIRPVFDRGIANTGLVIIQMVNEIMVFAVNLGIIEFNKCSNVASTFNV--- 205 Query: 262 VPVSASKADDCLQKEQLKSWFSAVRSLN-NPIASAYLQVLLLTGARREEIASLRWSDVDF 320 +K ++ E+L + SA+R + + ++ LLT R E A+ +W +++F Sbjct: 206 --KKTTKHQPTIRPEKLPEFMSALRDSAVDLVVKLLIEFSLLTMVRPNEAANAKWDEINF 263 Query: 321 KWSSMRIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEP 377 + I K++ +PL+ +LLN L Q + ++F+S K + Sbjct: 264 DDALWHIPAERMKMKKAFTVPLSSQAIKLLNKLKQI----TGRSRFIFQSPRAPQKPMSS 319 Query: 378 RSAHNRALVLAELPHISLHGLRRSFGTLAEW--VEVPTGIVAQIMGHKPSALAEKHYRRR 435 +A+ + ++ HGLR T +++ I+ + H+ Y R Sbjct: 320 VTANAAIRRIGYNGKLTSHGLRSIASTYLSEKFIDINVEIIEACLSHQGKNPIRNAYNRS 379 Query: 436 -PLDLLRKWHEKIETWILN 453 L+ + ++ Sbjct: 380 TYLEQRKLLMADWGQFVEE 398 >UniRef50_B5J7B6 Site-specific recombinase, phage integrase family protein n=3 Tax=Proteobacteria RepID=B5J7B6_9RHOB Length = 446 Score = 247 bits (631), Expect = 6e-64, Method: Composition-based stats. Identities = 78/451 (17%), Positives = 143/451 (31%), Gaps = 61/451 (13%) Query: 33 FTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNIND 91 + +R P D L R SG++ +V + V +G+ + +G Sbjct: 28 LSAAFVRTVRDPGK-----YHDGGGLGLMLRVEPSGSRRWVQRIVISGRRREIGLGTPPV 82 Query: 92 WKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELR 151 + AR A + G DP + +T +TF+ A E + Sbjct: 83 VTLAAAREAALDNMRTVQAGNDPVAIRRN------------ARTFLTFATAAEHAIAAKS 130 Query: 152 TGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAA 211 + + R + + L L LP+ ++ + Sbjct: 131 SEFRSDKHRKQWRSTLDTY---------------------ALPILGALPVGKVNTADVLR 169 Query: 212 WLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK--A 269 L + + + A + W+ +G + + P +K Sbjct: 170 VLEPIWTEKTETASRLRGRIEAILSWATAAGHREGENAARWKGNLSEMLPKPQRVAKTVH 229 Query: 270 DDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIK- 328 L + W++A+R + +A+ L+ L LT AR E+ + W++VD + Sbjct: 230 HPALASSDVSVWYAALRGRDG-VAARALEFLALTAARSGEVRGMTWAEVDLTTGVWTVPA 288 Query: 329 --DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEG-WVFRSNSKS-GKIIEPRSAHNRA 384 K E +PL+ LL +A +P++D G VF + + + R Sbjct: 289 DRMKASREHRVPLSAPAFSLLESMAVAPDADPTDCGRPVFSAPRGGVLSDMSLSAVMRRM 348 Query: 385 ------------LVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHY 432 L A HGLR +F P + + H + E+ Y Sbjct: 349 QQAEIDVGCAGWLDRASGRPAVPHGLRSTFRDWTAECGYPRDMAEMALAHDVGSAVERAY 408 Query: 433 RRRPLDLLRKWHEKIETWILNEAGITIKNNV 463 RR + R+ + W G +V Sbjct: 409 RRSDMLERRRAM--MAAWSDFLDGRVETGDV 437 >UniRef50_C7HXY0 Integrase family protein n=1 Tax=Thiomonas intermedia K12 RepID=C7HXY0_THIIN Length = 392 Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 59/430 (13%), Positives = 123/430 (28%), Gaps = 54/430 (12%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIGNIN 90 T + + ++ L D L A +G K++ GK T G Sbjct: 1 MSLTVKAVDAAK--PQERPYKLTDGGGLYLFV-APTGLKSWRANYELNGKQRTRTYGRYP 57 Query: 91 DWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQEL 150 + AR + ++ + K TF E +L+ Sbjct: 58 AMTLAQAREAHTQAKS---------------TPAEAATVTPIAKVAPTFKAITEQWLKIK 102 Query: 151 RTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIA 210 +S + + ++ LP+ ++ + Sbjct: 103 LPSLSNGKHQGQVAGTLER---------------------FAYPAIGKLPIDQIPRTKLV 141 Query: 211 AWLSTERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKA 269 + ++ + A ++ + L VR + P K Sbjct: 142 EVVQAVQKGGRVETAHRVAGRIAAVFDYAQDVGYIESHGAAGL-----VRVLQPRKVKKP 196 Query: 270 DDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIK- 328 + + + +A+ P+ LQ+L LT R E+ +RWS++ + + Sbjct: 197 MASIPPGEAGALLAAIDGYEEPVTRLGLQLLALTFVRVGEMRGMRWSELREDGTVWVVPA 256 Query: 329 --DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALV 386 K ++PL+ +L L V S + G + + Sbjct: 257 DRMKAGLPHVVPLSQQARAVLEQLR----VLTGDRNLVLDSPLRPGHALSENTFLFALYR 312 Query: 387 LAELPHISLHGLRRSFGTLAEW-VEVPTGIVAQIMGHKPSALAEKHYRR-RPLDLLRKWH 444 L ++ HG R T+ ++ + + H+ + Y R + LD R Sbjct: 313 LGYRGRMTAHGFRALASTVLNEQSGFAHDVIERQLAHRETDTVRAAYNRAQYLDQRRGLM 372 Query: 445 EKIETWILNE 454 + W+ + Sbjct: 373 QWWADWLDRQ 382 >UniRef50_A1TYD6 Phage integrase family protein n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TYD6_MARAV Length = 412 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 79/436 (18%), Positives = 148/436 (33%), Gaps = 47/436 (10%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMT 85 M + K T ++ T + K+T L D L + + + Y GK + Sbjct: 1 MTRAANKLTETAVKHATFSKYGKRTKLADGA--GLYLDIQKAGRYWRLKYRYGGKEKLLA 58 Query: 86 IGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWED 145 +G D + +ARA+ + L+ IDP + + AE A TF + Sbjct: 59 LGVYPDVSLKEARAKRDEAKRLLADNIDPVTHRQREKAERVEATA------TTFKGIALE 112 Query: 146 YLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 +L+ + T P + R + + L P++E+ Sbjct: 113 WLEHVHKKNVGATTYPKNKRRLEMY---------------------AYPKLGRRPMAEIE 151 Query: 206 PDYIAAWLSTERQNRPT-VTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPV 264 P + A L L+ +++ + + DL R ++P Sbjct: 152 PPDVLAILREIEGKGHVDNAHRLKTLIGQVFRYAVSTGRATRDVTADL------RGILPA 205 Query: 265 SASKAD-DCLQKEQLKSWFSAVRSL-NNPIASAYLQVLLLTGARREEIASLRWSDVDFKW 322 K +++ + + +P L++ R + +RW ++D+ Sbjct: 206 PNVKHHAAVTTPDEIADMLKKIDTYWGSPTVCLALKLSPYLFLRPGNLRHMRWEEIDWDA 265 Query: 323 SSMRIKDKIEGER-IIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAH 381 ++ GE ++PL +LL L + WVF S + G+ + A Sbjct: 266 ATWTTDTTKNGEPLVVPLARQAIDLLKELQEL----NGNREWVFPSGAGKGRPMSEN-AI 320 Query: 382 NRALVLAELPHI-SLHGLRRSFGTLAEW-VEVPTGIVAQIMGHKPSALAEKHYRRRP-LD 438 AL EL I S HG R T+ + T I+ M H+ + + Y R L Sbjct: 321 TGALNRLELQGIMSAHGFRAMAKTVLTERLGFRTEIIEMQMAHRVRDVHGRAYNRTTWLP 380 Query: 439 LLRKWHEKIETWILNE 454 + ++ ++ N Sbjct: 381 ERQAMMQQWADYLDNL 396 >UniRef50_A1WW57 Phage integrase family protein n=4 Tax=Proteobacteria RepID=A1WW57_HALHL Length = 412 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 70/437 (16%), Positives = 130/437 (29%), Gaps = 47/437 (10%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYA-GKTLR 83 M K T + R PEGK+Q L D L ++G K + F+ G+ Sbjct: 1 MGRGTNKLTDRQCRTAKPPEGKQQLKLTDGG--GLVLLVKSNGGKQWQFRYRRPSGREAT 58 Query: 84 MTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAW 143 M +G D + AR + L+ GIDP + + + A + +F Sbjct: 59 MGLGVYPDVPLSKARERRDEARALLADGIDPIDQRKAQRS------AAASADTHSFEAVA 112 Query: 144 EDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSE 203 ++ ++ R L P+S Sbjct: 113 REWWDA---------------------VHRHKVVASHANRNLRRLEQYAFPKLGRRPVSA 151 Query: 204 LTPDYIAAWLSTERQ-NRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMV 262 + P + L L+ +++ + DL R M+ Sbjct: 152 IEPPDVLEALRRIEALEHVETAHRVKTLIGQVCRYAIATGRGSRDPTADL------RGML 205 Query: 263 PVSASKADDCLQ-KEQLKSWFSAVRSLNN-PIASAYLQVLLLTGARREEIASLRWSDVDF 320 ++ + +L A+ P A LQ+ + R E+ + W D Sbjct: 206 RSPKTRHLPAITEPAELGPLLRAIDGYRGQPTTRAALQLAPIVFCRPGELRAAEWQAFDL 265 Query: 321 KWSSMRIKDKIEGERII-PLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRS 379 + + +G+ ++ PL +L L S ++F S + I + Sbjct: 266 SSGTWDYQPSKDGDPLVTPLPRQAISILRELEPISRS----SRYLFPSGRTPDRPISDNT 321 Query: 380 AHNRALVLAELPHISLHGLRRSFGTLAEW-VEVPTGIVAQIMGHKPSALAEKHYRRRPLD 438 L + HG R + T+ + IV +GH+ + Y R Sbjct: 322 LTAALKRLDYGGRMVAHGFRAAARTILVERLGWGIEIVEMQLGHRVRDAHGRAYNRTQWI 381 Query: 439 LLR-KWHEKIETWILNE 454 R ++ ++ Sbjct: 382 EQRGVMLQQWADYLDEL 398 >UniRef50_A4SXW8 Phage integrase family protein n=1 Tax=Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 RepID=A4SXW8_POLSQ Length = 434 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 81/460 (17%), Positives = 156/460 (33%), Gaps = 65/460 (14%) Query: 29 SRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSG----AKAFVFQSVYAG--KTL 82 + FT L P + D + L + + G ++++F+ K Sbjct: 5 KKISFTARGLGSIISPG-----YHADPESKGLYIQVSKGVNNFKRSWIFRYTSPTLFKRR 59 Query: 83 RMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVA 142 M +G++ + DAR + L+ L+ GIDP + +A+S + + +TF A Sbjct: 60 EMGLGSLEARSLADARRKTLELRQLVMDGIDPTEDR----CKAKSKRITAINNGITFKEA 115 Query: 143 WEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLS 202 E ++ + + I+ + L + Sbjct: 116 AERCIEGRKAEWKSSKHADQWRNTIST---------------------FAYPEIGELRVD 154 Query: 203 ELTPDYIAAWLSTERQNR------------PTVTAHAYRLLRAFIKWSNYQKKYQGIIPG 250 ++ +IA L E +N+ + + W + +G P Sbjct: 155 QINTSHIAKLLEQEIKNKNGTVEGTFWNVRTETATRVRQRIEVIFDWCKAHEYIKGDNPA 214 Query: 251 DL--AQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARRE 308 L A + + K + L +++ + +R N ++ L++L+LT R Sbjct: 215 RLKGALGHLLPKAKKIQKKSHHPALPFQRIGEFVKDLREHNG-YSALALELLILTATRTS 273 Query: 309 EIASLRWSDVDFKWSSMRIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVF 365 E+ +W++ + + I K E +PL E+L L ++F Sbjct: 274 EVIEAKWTEFNLETKVWVIPAARMKAGKEHRVPLNTRAMEILEHLKTISV-----SSYLF 328 Query: 366 RSN-SKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEW-VEVPTGIVAQIMGHK 423 + K + + + + + HG R +F A + P V + H Sbjct: 329 PGSLHKEESHLSNMALLSMMRKMPKYSGYVPHGFRSTFRDWAAETTDYPNETVELALAHT 388 Query: 424 PSALAEKHYRRRPLDLLRKWHEKIETW--ILNEAGITIKN 461 AE YRR+ D L K +E W I+N A +N Sbjct: 389 IKNKAEAAYRRQ--DQLEKRTVLMEEWGAIVNAAINKNEN 426 >UniRef50_B4WEQ1 Site-specific recombinase, phage integrase family protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WEQ1_9CAUL Length = 429 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 92/470 (19%), Positives = 158/470 (33%), Gaps = 93/470 (19%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSG------------AKAFVFQS 75 +++QK T + +PE + +WD+++ R G K F + Sbjct: 1 MTKQKLTKRVVESAPVPETGEG-RIWDSEIAGFCLRIYPGTETRQGNSAKPVRKIFAIKY 59 Query: 76 VYAGKTLRMTIGNIND----WKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAE 131 G +T+G D D AR EA + GIDP A+ Sbjct: 60 RVRGIQRWLTLGEHGDGPDKLTADRARREAASVVVDARRGIDPGEARR------------ 107 Query: 132 SRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAG 191 R +T E YL++ K ++ + Sbjct: 108 -RIEGLTVKGLIELYLEKGPNDKPTKRDSSWA-------------------MDRTNLERH 147 Query: 192 PLASLLNLPLSELTPDYIAAWLSTER------------------QNRPTVTAHAYRLLRA 233 + L + L ++ D+I + + + + Y LRA Sbjct: 148 VVPLLGKMALDTVSRDHITGMIRSITAGKTAKDVKTKFRGRSIVKGGAGIADRTYSTLRA 207 Query: 234 FIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLN---- 289 W+ + + G P K+ + L + Q + +A+ +L Sbjct: 208 TFNWAIDKGHFAGPNPC--------AKVERKLRPAVERFLSEAQAQDLIAALDALEADAT 259 Query: 290 -NPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEG------ERIIPLTPY 342 + A ++LLLTGARR EIA LRW++VDF + + +R I L Sbjct: 260 ISERQGAVYRLLLLTGARRNEIAGLRWTEVDFDRRRLVLPPSRTKAGGRTGDRRISLNDM 319 Query: 343 VSELLNVLAQSPNSDVNKEGWVFR-SNSKSGKIIEPRSAHN-RALVLAELPHISLHGLRR 400 +L L ++ + +VF S +G + L A+L + +H LR Sbjct: 320 AYGILQRLYKTR----GRSQFVFPASKGDNGYATSESKIWRDKVLPKAKLEGVRIHDLRH 375 Query: 401 SFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETW 450 SF + A ++ + +GH S E+ Y D +R E+I Sbjct: 376 SFASFALADGASLPMIGKALGHANSRATER-YAHLSDDPVRALAERIGER 424 >UniRef50_A1TXN0 Phage integrase family protein n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TXN0_MARAV Length = 396 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 81/419 (19%), Positives = 150/419 (35%), Gaps = 55/419 (13%) Query: 57 VTTLACRAT-SGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPR 115 LA R + G K + ++ + GK +++G + +AR L+ GI+P+ Sbjct: 6 GGGLAIRISIRGTKTWFYRFRFRGKQDAVSLGRYPTTSLLEARDVHGDACALLAKGINPK 65 Query: 116 IAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSS 175 +A + + T ++D+++ + S +TKR Sbjct: 66 --------KAFKESKKVAEQTWTGQELFDDWIRVYSSTPSTRTKRT-------------- 103 Query: 176 RGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQ-NRPTVTAHAYRLLRAF 234 + ++ + +L + + +T A+ +S + N +L Sbjct: 104 PSEQVVRQTTWRWNKYLRRTLGQILIPTITKQVAASLISAVSELNSREQARKCLTILNGM 163 Query: 235 IKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPI-A 293 + +G+I + K+ S L ++K ++ A+ + Sbjct: 164 FGLAVA----KGLIDENPCYGLQPSKLGASKGSPRSRVLTPSEMKRFWEALEDSSLDTSV 219 Query: 294 SAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIK---DKIEGERIIPLTPYVSELLNVL 350 A L+ +LLTG RR EI +WSD+DF + + K + +P++ + LL L Sbjct: 220 RAALKAILLTGLRRGEICQAKWSDIDFNTNVWNLPPEITKSRRKHTVPISTALKNLLQSL 279 Query: 351 AQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALV--------------LAELPHISLH 396 +VFRS + I S L L S+H Sbjct: 280 -------DMDGTYVFRSTRAPWQPIGSNSLTTAIARLQGIKTQQVNEKAPLFGLERFSVH 332 Query: 397 GLRRSFGTLAEW-VEVPTGIVAQIMGHKPSALAEKHYRRRPL-DLLRKWHEKIETWILN 453 LRR+ T E P ++ +I+ H E Y+R L D K E+ TW++ Sbjct: 333 DLRRTVATGLGEYCETPPHVIRRILNHLSDDRLEDIYQRATLFDEQAKALERWSTWVME 391 >UniRef50_A5L0D7 Site-specific recombinase, phage integrase family protein n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5L0D7_9GAMM Length = 375 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 61/422 (14%), Positives = 143/422 (33%), Gaps = 65/422 (15%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTI 86 + + T + ++ +D V+TL R SG + F + + G + Sbjct: 1 MKKISLTQRFVEHVKPTSTTQEY--YDTKVSTLYLRVYPSGRRVFFVRFQHNGLRRNHKL 58 Query: 87 GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDY 146 G+ D+ + AR EA ++ + + P++ +T +++ Sbjct: 59 GSALDYSLRQARREALQVVQQVRS---PKME---------------TLPSITLQAFGQEF 100 Query: 147 LQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTP 206 + T + + + L + + + Sbjct: 101 FKRYPRHWKPNTLK----------------------KNESAFRLQIAPYLGDREVQSIVR 138 Query: 207 DYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSA 266 + W + + A LL ++ + R A Sbjct: 139 SDVEQWFTQLSHVK-GSANQALVLLSVMMQQCEAWEYR-------PKNTNPCRGFKRYKA 190 Query: 267 SKADDCLQKEQLKSWFSAVRSLN--NPIASAYLQVLLLTGARREEIASLRWSDVDFKWSS 324 + + L K++L+ + + +L NP +++L+ TG R E+ +L+W + ++ Sbjct: 191 GEVERYLSKDELRQLWRVLDTLEGDNPAKVMIIRLLIYTGCRSSEVRTLQWKE--YRGGH 248 Query: 325 MRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPR--SAHN 382 + D G + + L V L+ ++ ++F + + I + Sbjct: 249 WHLLDSKTGAKTVYLCSQVRAYLDAWQ-------SESHYLFPAPCNTKPISTNQLGIFWR 301 Query: 383 RALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRK 442 +A LA L + LH LR ++ ++A +V ++++++GH + K Y D + + Sbjct: 302 QARQLAGLEGVRLHDLRHTYASIAIQSKVNLIVLSRLLGHAEAETTLK-YAHLGRDDVCQ 360 Query: 443 WH 444 Sbjct: 361 AA 362 >UniRef50_B8F555 CP4-57 prophage, integrase n=1 Tax=Haemophilus parasuis SH0165 RepID=B8F555_HAEPS Length = 405 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 75/439 (17%), Positives = 154/439 (35%), Gaps = 53/439 (12%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSV--YAGKTL 82 MA + +++ K L D L + +G+K++ F K Sbjct: 1 MAKKVHQLVDTEIKKAKA--KDKPYTLTDGG--GLFLLVSITGSKSWRFNYYQPITKKRT 56 Query: 83 RMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVA 142 +M +G + ARA + L+ IDP+ K E TF Sbjct: 57 KMALGMYPTVNLSKARALRDEYKKLLADDIDPQQYIKNKQQEKLQETQN------TFLAI 110 Query: 143 WEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLS 202 E + Q+ I T + + R +L N+ ++ Sbjct: 111 AEQWKQKKSAEIKPATLKNHWRRL----------------------ELYAFPTLGNISIT 148 Query: 203 ELTPDYIAAWLSTERQNR-PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKM 261 + P + ++ + + + ++++ + + D+A + Sbjct: 149 MIKPLQVTELVTPLFLRGVNSTGVLLLQTINEIMRFAVNRGIIEFNKCADIADTFV---- 204 Query: 262 VPVSASKADDCLQKEQLKSWFSAVRSLNNP-IASAYLQVLLLTGARREEIASLRWSDVDF 320 S S+ ++ E L +F+A+R+ + I + ++ LLT AR E A+ +W+++DF Sbjct: 205 --KSKSEHHPTIRPEHLPEFFAALRNSHADLIIKSLIEFSLLTIARPSEAANAKWAEIDF 262 Query: 321 K---WSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEP 377 + W+ + K++ IPL+ ++L L + ++F+S K + I Sbjct: 263 EQSLWNIPAERMKMKQPFTIPLSIQAVKILKKLQ----VITGRSLYIFQSIKKPSQPIGK 318 Query: 378 RSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPT--GIVAQIMGHKPSALAEKHYRRR 435 + A+N + ++ HGLR T + I+ + HK Y R Sbjct: 319 QIANNTIKQMGYKGKLTSHGLRSIANTYLSEKFIDLNVEIIEACLSHKSQNQVRNAYNRS 378 Query: 436 -PLDLLRKWHEKIETWILN 453 L+ + ++ Sbjct: 379 TYLEQRKPLMNDWGQFVEE 397 >UniRef50_B1Y106 Integrase family protein n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y106_LEPCP Length = 429 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 67/447 (14%), Positives = 144/447 (32%), Gaps = 50/447 (11%) Query: 26 MALSRQKFTFERLRR-FTLPEGKKQTFLWDADVTTLACR--ATSGAKAFVFQSVYAGKTL 82 MA ++ K + LR K+ D L GA + + GK Sbjct: 1 MATAQIK-SDTGLRAELKAIVDGKKPARRIGDGGGLYLLPLVKGGAHGWRLDYTFNGKRK 59 Query: 83 RMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRK-------- 134 +++G D + AR +A +TL+ G DP + E E ++ Sbjct: 60 TLSLGTYPDTGLSLARKKAAEARTLVAEGTDPSEHRKGVKEERERQHLAGQEAAQRAAAG 119 Query: 135 --TKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGP 192 + D+LQ + T+ + Sbjct: 120 LAEPGSLEAVAADWLQHRAGAWTEGTRHNIAGSL----------------------KRYV 157 Query: 193 LASLLNLPLSELTPDYIAAWLSTERQNRPT-VTAHAYRLLRAFIKWSNYQKKYQGIIPGD 251 +L P+ E+ P I + + ++ LRA +++ + ++ D Sbjct: 158 FPTLGRRPVGEIAPGEIRTCVQRIEASGAAETAGRVFQRLRALYRYAVAHE----LVAAD 213 Query: 252 LAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSL-NNPIASAYLQVLLLTGARREEI 310 ++ +K + ++ ++ + +P L +L+LT R E+ Sbjct: 214 PTYPLKPSEIFRPRDTKHRPAMSAQEAPAFLRKLADYGGDPTVRNALLLLVLTAVRPGEL 273 Query: 311 ASLRWSDVDFKWSSMRIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRS 367 + W+++D + RI K++ E ++PL+ +L + + +F S Sbjct: 274 RAAEWTEIDEAAALWRIPAAHMKMKAEHLVPLSVQALAVLEEMRAL----TGTQALIFPS 329 Query: 368 NSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSAL 427 G+ + ++ + + HG+R F T A ++ + + H+ Sbjct: 330 PFYPGRPFSENTMNSALARMGYKGEATAHGMRTLFSTSANEAGHRGDVIERQLAHEERDD 389 Query: 428 AEKHYRRR-PLDLLRKWHEKIETWILN 453 Y R + R+ + + Sbjct: 390 VRGAYNRAEYMAERRRLMTWWGERVDS 416 >UniRef50_D2LKM4 Integrase family protein n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LKM4_RHOVA Length = 423 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 76/448 (16%), Positives = 147/448 (32%), Gaps = 60/448 (13%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNI 89 K + + +K+ + D + T L SGAK+FV + + ++T+G+ Sbjct: 3 IKLSSLSVTALK--PKEKRYEVSDME-TGLGVVVQPSGAKSFVVRYRLGKRLGKVTLGSA 59 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 +D + AR +AR+ L+ GIDP + + A + AE + F + EDY++ Sbjct: 60 SDITLAAAREQARQTMALVRQGIDPAEHRKTEKAARIA--AEEERKDSLFEIVAEDYIRR 117 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 + + + + + + +T I Sbjct: 118 HVSTLKGGH------------------------EVERLLRKHVIPAWKGRRIETITKRDI 153 Query: 210 AAWLSTERQNRPT-VTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 + H + +RA W+ + L + P S Sbjct: 154 LKVTDPIIEQGHGRTANHVFAWMRALFSWALERDLPG------LEHSPFDKLKAPAPKSS 207 Query: 269 ADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDV------DFKW 322 D L + +L+ ++L P ++++L+ T RR E+A W++ D +W Sbjct: 208 RDRVLSEAELRLVLRGSQTLETPW-REFVRLLVYTATRRNEVACAPWAEFTGLNTADPRW 266 Query: 323 SSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNS----DVNKEGWV--FRSNSKSGKIIE 376 + K ++PL + +L + + V E V F + Sbjct: 267 EIPGARTKNGRPLLLPLPLDAARMLAEMPRIGEKGLAFTVTGETPVMGFSDAKERLDAAM 326 Query: 377 PRSAHNRALVLAE-------LPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPS---A 426 A A E LP + H LRR+ T + V ++ ++ H Sbjct: 327 LAIARKEAAERGEDPEKVLPLPRWTWHDLRRTTATGMAGLGVQPHVIEAVLNHVSGAKAG 386 Query: 427 LAEKHYRRRPLDLLRKWHEKIETWILNE 454 +A + R L + + Sbjct: 387 VAGIYNRHAYLAEKKAALAIWAKHVATL 414 >UniRef50_Q3JN19 Prophage CP4-like integrase n=62 Tax=Proteobacteria RepID=Q3JN19_BURP1 Length = 462 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 57/436 (13%), Positives = 117/436 (26%), Gaps = 49/436 (11%) Query: 27 ALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMT 85 + + +R K L D D + +G K + Y GK + Sbjct: 54 GTNDMNLSDLAVRNAK--PQDKPYKLTDGD--GMFLLVQPNGGKYWRLAYRYLGKQKTLA 109 Query: 86 IGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWED 145 +G + + AR + + G DP K A +F V Sbjct: 110 LGVYPEVSLALARQRRAEAREQLAKGADPGETKKADRRAARLA------ADNSFEVVALA 163 Query: 146 YLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 +L+E R + + R L P++++ Sbjct: 164 WLEERRPYVEPRQHE----------------------RTLVRLKNDVFPWLGKRPIADID 201 Query: 206 PDYIAAWLSTERQNRPT-VTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPV 264 I A L + + + + L + + Sbjct: 202 APEILAVLKRIDSRGARFTAHRIRSEIGRVFVYGIKEGHCKANPAASLVKAIPPAQTTHF 261 Query: 265 SASKADDCLQKEQLKSWFSAVRSLNNPIASA-YLQVLLLTGARREEIASLRWSDVDFKWS 323 ++ + Q+ A + L++ + R E+ WS D + + Sbjct: 262 AS-----ITEPAQVGEMLRAFDGFSGTFPVLCALKLAPMLFVRPGELRKAEWSHFDLEKA 316 Query: 324 SMRIKDKIEG-ERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHN 382 R E ++PL ++L L ++ +VF + + + + Sbjct: 317 EWRYLVTKTKTEHLVPLATQAVKILKEL----HAVTGSGQYVFPGARSKQRPMSDAAINA 372 Query: 383 RALVLAE--LPHISLHGLRRSFGTLAE-WVEVPTGIVAQIMGHKPSALAEKHYRRR-PLD 438 L I+ HG R T+ +E ++ + H + Y R + Sbjct: 373 ALRRLGYDTRTEITGHGFRAMARTILHEELEQKPEVIEHQLAHTVPDTLGRAYNRTKFIK 432 Query: 439 LLRKWHEKIETWILNE 454 +K ++ Sbjct: 433 ERCAMMQKWADFLDQL 448 >UniRef50_A3WKP7 Site-specific recombinase, phage integrase family protein n=1 Tax=Idiomarina baltica OS145 RepID=A3WKP7_9GAMM Length = 411 Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats. Identities = 70/447 (15%), Positives = 155/447 (34%), Gaps = 72/447 (16%) Query: 36 ERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIGN-INDWKI 94 +++ + + L R G ++ + YAGK +T+ + + Sbjct: 4 SQIKALVRAGED----VRKSVGDGLYFRIEQGTASWFVRYTYAGKRKTITLSEGYPNCSL 59 Query: 95 DDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGI 154 DA+ +A +++ + GIDP++ + + A T + D+ R Sbjct: 60 ADAKIQAAAIRSKVKNGIDPQLERRRETGGAIH----------TVHDLFNDWFD--RAVK 107 Query: 155 SAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLS 214 + R +++ + L L ++TP + L Sbjct: 108 NRVKHPGNDERVYRNYLK---------------------SRLGKYSLKDITPIDVRNVLD 146 Query: 215 TERQNR-PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCL 273 +Q T ++ A +++ ++ + A + V S + L Sbjct: 147 ELQQTGNKTTSSRALSIMKRMFNH----GIKLNLVSSNPAIYF-TGVDVGQDYSPRERSL 201 Query: 274 QKEQLKSWFSAVRSLNNPIASA---YLQVLLLTGARREEIASLRWSDVDFKWSSMRIK-D 329 +++K+ FS R + +LL G R+ EI S RW +D + + + Sbjct: 202 SADEIKTAFSVFRKQQDIFTRDNYLACLLLLHLGCRKSEIISSRWEQIDLEDQTWFFPEN 261 Query: 330 KIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGK--IIEPRSAHNRALVL 387 K +P+ + ++ L +VF S +S + I + ++ L Sbjct: 262 KTSKPITVPIPNQMLPVIEELKVR----CAGSEYVFPSRRRSKRRGYISDDTLNHALAKL 317 Query: 388 ------------------AELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAE 429 A + H ++H LRR++ TL ++VP I + + H+ + + Sbjct: 318 FGQKVDSKKQPYPNVLGSAGVDHFTVHDLRRTYRTLLAKLKVPDAIAERCLNHELRGVLK 377 Query: 430 KHYRRRPLDLLRKWHEKIETWILNEAG 456 + + L+ R+ + K+ ++ Sbjct: 378 VYNQYDYLEERREANAKVADFLEPLIQ 404 >UniRef50_B3GXJ8 Prophage CP4-57 integrase n=4 Tax=Pasteurellaceae RepID=B3GXJ8_ACTP7 Length = 406 Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats. Identities = 61/442 (13%), Positives = 129/442 (29%), Gaps = 57/442 (12%) Query: 28 LSRQ--KFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSV--YAGKTL 82 + + + + + + +D L R S K ++F + Sbjct: 1 MPKIVKPLNNTEVEKAKIKPAE----YSLSDGYGLYLRVKPSKVKTWIFNYQEPITKRRT 56 Query: 83 RMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVA 142 +TIG+ I +AR + L+ GIDP+ K + + TF Sbjct: 57 NLTIGDYPAISIAEARTIREEYRALLAKGIDPKTNKEEQERQQAEQ------NDNTFLKL 110 Query: 143 WEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLS 202 + + ++ + T R L + + Sbjct: 111 AQLWKEKRSKEVEPLTMAKNWARL----------------------ENHLFPVLGHYAID 148 Query: 203 ELTPDYIAAWLSTERQNR-PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKM 261 ++TP + + L + + G++P + Q+ + Sbjct: 149 KITPPILIKAVKPLNDKGINDTLHRILNLANQILNY----GVTVGVLPFNACQNVS--DA 202 Query: 262 VPVSASKADDCLQKEQLKSWFSAVRSLNNPI-ASAYLQVLLLTGARREEIASLRWSDVDF 320 ++ +L + ++ N + LL+ R E S+ W+++DF Sbjct: 203 YHKETQTHHPAIKPSELPKLIADFQNSNRDFLTKVLFKWQLLSMVRPAEAVSIEWAEIDF 262 Query: 321 KWSSMRIK---DKIEG----ERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGK 373 + I K +PL+ + ++L L +VF S+ K Sbjct: 263 DKNLWFIPAEKMKKTRKGQFPHTVPLSSQMLKILESLR----PITGVNKFVFPHYSQPNK 318 Query: 374 IIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALA-EKHY 432 + + N + HGLR T E V + H+ + + Sbjct: 319 SMSKETITNALRKIGYRGIQDSHGLRSIARTYLEDQAVDFRAAESCLAHRIGNETSQAYN 378 Query: 433 RRRPLDLLRKWHEKIETWILNE 454 R ++L R + + + Sbjct: 379 RAEYIELRRPLMQLWGDYCESC 400 >UniRef50_A5WEX8 Phage integrase family protein n=2 Tax=Psychrobacter RepID=A5WEX8_PSYWF Length = 425 Score = 244 bits (623), Expect = 5e-63, Method: Composition-based stats. Identities = 83/448 (18%), Positives = 160/448 (35%), Gaps = 52/448 (11%) Query: 30 RQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIGNI 89 + K T + + L E D +T A + +K ++ K R + + Sbjct: 2 KVKLTKKFIDDLPLTESG-YKIYPDEALTGFALYVGTKSKRYILNRRINKKMYRTLVDEV 60 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 + + AR +A + I G P + + T A+ Y +E Sbjct: 61 HMTTLTAAREKATAMMVNIRQGSHPYEG--LHELPEIEDEESKAPQVPTLLEAYN-YFKE 117 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 +++ +S T Y + + L+ L+ PL+++T I Sbjct: 118 MKSELSDGTITTYDRQILGK-----------------------LSDWLDKPLNDITKAMI 154 Query: 210 AAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQG---IIPGDLAQDYNVRKMVPVSA 266 + N R LR+ + + II + N +K + Sbjct: 155 SKKHKEISANSKAQANATMRALRSVWNYCRDSFLDENEDFIIKEQPIKILNAKKD-WNNI 213 Query: 267 SKADDCLQKEQLKSWFSAVRSLNNPI----------ASAYLQVLLLTGARREEIASLRWS 316 + +E L +F + + A + + +LTG R E +L WS Sbjct: 214 KPRTRHVAEENLGQFFKTLLKYTDRSSHMQAPHSNNARDLMLMFMLTGVRLNEGQNLEWS 273 Query: 317 DVDFKWSSMRIKDKIEG-ERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRS--NSKSGK 373 DVD + +D G + +PL ++L L + + WVF S ++ G Sbjct: 274 DVDLDNGYIVFRDTKNGSDYDMPLG----KILAALLKERKRLSDGSRWVFPSSQSNTDGP 329 Query: 374 IIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKH-- 431 I + ++ R L + +I+ H LRR+FGT+A + + ++ +++ H+ + + Sbjct: 330 ITDLTRSYKRIGELNGM-YITPHDLRRTFGTVANSLNINYPVLKRLLNHRETKATDDVTL 388 Query: 432 -YRRRPLDLLRKWHEKIETWILNEAGIT 458 Y + LR +IE +A +T Sbjct: 389 QYVQVSQKQLRTALNQIEKLYCKQAEMT 416 >UniRef50_A3UTJ0 Site-specific recombinase XerD-like n=1 Tax=Vibrio splendidus 12B01 RepID=A3UTJ0_VIBSP Length = 411 Score = 244 bits (622), Expect = 7e-63, Method: Composition-based stats. Identities = 78/437 (17%), Positives = 149/437 (34%), Gaps = 49/437 (11%) Query: 29 SRQKFTFERLRRFTLPEGKKQTF---LWDADVTTLACRATS-GAKAFVFQSV--YAGKTL 82 ++ KFT + + + + + D +VT L G K F+ + + K Sbjct: 6 NKFKFTPSVINKIPPHDRRSKATNDERSDTEVTGLKLLVGKTGNKRFLLRYISPVTKKKS 65 Query: 83 RMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVA 142 + +G D + R +AR+L+ I GIDP++ + + T Sbjct: 66 SIALGQWPDMDLPTVRNKARKLKVQIADGIDPKLER----------DKQVETQVPTLYDF 115 Query: 143 WEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLS 202 + D + KT R R+ P+ + + L Sbjct: 116 FHDTFIVSKKSKGKKTWRDDIARF----------------EHWKHLHTKPIDKITGVHLH 159 Query: 203 ELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMV 262 ++ +A ++ L++ +K + V + Sbjct: 160 QVQAKLLATEYRPGKKYAAATVDRTIALMKTVLKEAYRLLDI-------PYIGDKVSLIN 212 Query: 263 PVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKW 322 P + L E+ + R + ++ +L LTG R E+ + +W D+ Sbjct: 213 P--DNMRTRYLTMEETAAVIRTSRDYYCRVTGNFIALLFLTGCRDSELRTRKWKDISLID 270 Query: 323 SSMRIKDKIEG-ERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAH 381 +M + D G +PLTP++ EL L +VF + I +PR+A Sbjct: 271 KTMFVPDTKNGSSMTVPLTPFMVELFRELLNMRQK---GNPYVFFGRKERSHISQPRNAF 327 Query: 382 NRALVLAELPH---ISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLD 438 R A + + + H R SF T V V ++M HK + +K+ + Sbjct: 328 ARIKERAGIKNPHEVCFHVARHSFATNLIENGVDVLTVQRLMNHKDLSSTQKYVKHSQQK 387 Query: 439 LLRKWHEKIETWILNEA 455 LL + + + + +A Sbjct: 388 LL-NSSDTLSSVLKEQA 403 >UniRef50_C3XC22 Integrase n=3 Tax=Oxalobacter formigenes RepID=C3XC22_OXAFO Length = 427 Score = 244 bits (622), Expect = 7e-63, Method: Composition-based stats. Identities = 70/437 (16%), Positives = 152/437 (34%), Gaps = 40/437 (9%) Query: 28 LSRQ--KFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQS-VYAGKTLR 83 +++ + +++ +K L+D L SG+K + + +GK R Sbjct: 1 MAKIIKPLSPIQIKNTK--PKEKAYKLFDGG--GLYLEVLPSGSKLWRLKFQKPSGKESR 56 Query: 84 MTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAW 143 +++G D ++ R + + L+ GIDP + + + F Sbjct: 57 LSLGAYPDVSLEQVRKKREEARRLLAQGIDPSEDRKEQKEAKQEQDVIRA-----FKD-- 109 Query: 144 EDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSE 203 + I+ + R D+ N R ++ ++E Sbjct: 110 ----DRMFERIAMRLYASKKGRTTDDYRNTMLR----------QFELHLFPAIGKKNIAE 155 Query: 204 LTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVR---K 260 + + + + + R +W+ + A + R K Sbjct: 156 IEGRELFTLFKAVSEKLNSKGKPMTYMARKLCQWAAEVYDLANVENSSFALNNPCRSVIK 215 Query: 261 MVPVSASKADDCLQKEQLKSWFSAVRSL-NNPIASAYLQVLLLTGARREEIASLRWSDVD 319 +P ++ + +L + A+ + + + + + +LL TG R+ I +WSD D Sbjct: 216 FLPKHQTEHMARIGFTELPQFIQALEAYGGHILTKSAIWMLLYTGMRQTSIRRAQWSDFD 275 Query: 320 FKWSSM-RIKDKIEGE-RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEP 377 R +K++ IIPL LL + + N E VF S +G++ Sbjct: 276 LNKGIWNRKPEKVDKNIHIIPLPEQAISLLKDIQLL--ATGNSENLVFPSVF-AGQLKMS 332 Query: 378 RSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSA-LAEKHYRRRP 436 +A +A+ ++ HGLR T + +V +GHK + + + Sbjct: 333 EAAIGQAIERMGFQ-MTGHGLRSVVSTGLNELGFTPRLVEVQLGHKKGDAIEAAYNNAQH 391 Query: 437 LDLLRKWHEKIETWILN 453 L+ +K ++ ++ + Sbjct: 392 LEERKKMMQRWANYLNS 408 >UniRef50_Q6LTT6 Hypothetical integrase n=1 Tax=Photobacterium profundum RepID=Q6LTT6_PHOPR Length = 446 Score = 244 bits (622), Expect = 7e-63, Method: Composition-based stats. Identities = 90/446 (20%), Positives = 162/446 (36%), Gaps = 49/446 (10%) Query: 33 FTFERLRRFTLPEGKKQTFLW----DADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIG 87 T ++ K W D L + SG+K+F F+ K + + IG Sbjct: 2 LTTTHIKSLK--PRKSAYSEWENTRDRKSGRLGVKVQPSGSKSFYFRYYKDLKPVFILIG 59 Query: 88 NINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAE------SLQAESRKTKVTFSV 141 + DAR +A+ + G DP+I + E Q E+ K + + Sbjct: 60 KFPAVSLSDAREKAKIYGAMWSDGKDPKIELQAERERIEQETVKLKAQQEAEKRQGSVGQ 119 Query: 142 AWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPL 201 + Y+ EL + KR + AD + S+ + Sbjct: 120 LLDSYINELVLREKSSFKR-VGKAFEADVYGVISK---------------------DTKA 157 Query: 202 SELTPDYIAAWLSTERQNRPT-VTAHAYRLLRAFIKWSNYQKKYQGI----IPGDLAQDY 256 ++TP I+ LS + + L A + + +L+ + Sbjct: 158 KDITPQDISIVLSKIIKRGAEVQSNKVRSYLHAAFNFGLRHDYDPKNLGQEVFFNLSFNP 217 Query: 257 NVRKMVP-VSASKADDCLQKEQLKSWFSA--VRSLNNPIASAYLQVLLLTGARREEIASL 313 + + D+ L+ ++++ +A + L L G R ++A+ Sbjct: 218 VSSVPKQLNAENVGDNWLKMDEVRYLVNADCSEYFSEEHLLLLKLCLYLGGQRPFDLANS 277 Query: 314 RWSDVDFKWSSMRIKD---KIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSK 370 WS VDF + + K + +IPLT +LL +L + + +E ++F + ++ Sbjct: 278 YWSAVDFAERTFEMSMRASKTDKPNLIPLTETAIKLLKLLRKIHPPKIGQECFLFPAKTE 337 Query: 371 SGKIIEPR--SAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALA 428 SG + R A R + + LRR+F TLA +EV I +I H + ++ Sbjct: 338 SGHLDTNRFGKAVKRFCDDTKFKKFTPRDLRRTFKTLAGALEVSKDIRDRIQNHALNDVS 397 Query: 429 EKHY-RRRPLDLLRKWHEKIETWILN 453 KHY R + R+ E ET I Sbjct: 398 SKHYDRYEYIKEKREALELWETSINE 423 >UniRef50_C6RSU9 Phage integrase family protein n=3 Tax=Acinetobacter RepID=C6RSU9_ACIRA Length = 426 Score = 244 bits (622), Expect = 8e-63, Method: Composition-based stats. Identities = 75/449 (16%), Positives = 140/449 (31%), Gaps = 61/449 (13%) Query: 26 MALSRQKFTFERLRRF-----TLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSV--Y 77 M T +++ F + Q + +D L +G + F Sbjct: 1 MPKQVISLTDSKIKAFLRDIKSNNPNGLQKDIRLSDGAGLNLLIRKNGTVMWRFDYTRPV 60 Query: 78 AGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKV 137 + K MT+GN + AR + + L+ G DP++ K + E K + Sbjct: 61 SKKRNTMTVGNYPAMSLAKAREYRDQFRALLAEGKDPQVEKQ------GVEEKERLKQQA 114 Query: 138 TFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLL 197 TF E Y R E+ + + Sbjct: 115 TFKSVAELY-------------------------KSKQRLAEATVKRNDGIFEKLYRDVG 149 Query: 198 NLPLSELTPDYIAAWLST-ERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDY 256 N+P+S++TP +A + E + +++ + + DLA Sbjct: 150 NMPISDITPRDLAKVIEKDENKGHIESAMRIRSKASQVFRFAVKMGLCERDVAQDLAGTI 209 Query: 257 NVRKMVPVSASKADDCLQKE-QLKSWFSAVRSLNNP--IASAYLQVLLLTGARREEIASL 313 R L + + LQ+ L R E+ + Sbjct: 210 TQR------EKNHYSALTDPFDFACLLFDIDHYESQLVHVKLALQLAPLVFVRIGELRNA 263 Query: 314 RWSDVDFKWSSMRIKDKIEG-----ERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSN 368 +WSD++F+ ++ + I+PL+ +L + N +VF S Sbjct: 264 KWSDINFETATWSYTPSKTSAKTGLDHIVPLSTQAIAILKE----ALNFTNNSDFVFPSR 319 Query: 369 SKSGKIIEPRSAHNRALVLA-ELPHISLHGLRRSFGTLAEW-VEVPTGIVAQIMGHKPSA 426 S + I S + + ++ HG R TL + +E P I+ Q + H+ Sbjct: 320 SDKHRPISDMSINMALRRMGYGKEDMTGHGFRAIARTLLDEVLEFPLDIIEQQLAHQVRD 379 Query: 427 LAEKHYRRR-PLDLLRKWHEKIETWILNE 454 + + Y R LD R ++ + Sbjct: 380 MHGRAYNRTKHLDKRRVMMQRWSDYCDEL 408 >UniRef50_C6I0A6 Phage integrase family protein n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6I0A6_9BACT Length = 453 Score = 244 bits (622), Expect = 8e-63, Method: Composition-based stats. Identities = 94/455 (20%), Positives = 168/455 (36%), Gaps = 59/455 (12%) Query: 23 SRKMALSRQK----FTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVY- 77 +R + + K T +++ L G KQ + D +V +L R K F Sbjct: 23 NRGIPMPSIKEKLRLTDTFIKKLALSSG-KQEYFQDTEVLSLFLRVGKRDKVFCVIKRLK 81 Query: 78 AGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKV 137 G +++ + + + AR A+ + I G DP + + S K+ Sbjct: 82 GGNVREISLASASLLTTEAARLRAKEILLDIALGKDPTQRRQL-----------SEMQKM 130 Query: 138 TFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLL 197 T A + YL+ +S+ ++++ L L Sbjct: 131 TLQEALDKYLE------------------------ISTLKESTRQKTYLYPFQHYLPDWL 166 Query: 198 NLPLSELTPDYIAAWLSTERQN---RPTVTAHAYRLLRAFIKWSN-YQKKYQGIIPGDLA 253 ++ +T D + +N R T +R LRA + + K + + + Sbjct: 167 PDKVTSITGDRVVNKYKELTKNNTIRTTTIQGLFRALRAVLNFIKSDWKGPEPLFTENPV 226 Query: 254 QDYNVRK-MVPVSASKADDCLQKEQLKSWFSAVRSL-----NNPIASAYLQVLLLTGARR 307 + V L + ++ ++ ++ ++ I AY +L TG RR Sbjct: 227 SKLASSNSRLWVKQEARTRILFEHEVPLLYNYLKERLRDPGSDHIVPAYFIFVLFTGCRR 286 Query: 308 EEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRS 367 E A+L DVD + + KD +R IPL+ + ELL L WVF Sbjct: 287 NEAATLTRHDVDLENGFVTFKDTKTVDRTIPLSEPLIELLLRLKTE-----TGGPWVFPG 341 Query: 368 NSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGI-VAQIMGHKPSA 426 K+G + EP+ + + +H LRR+F T A V + V ++GHK Sbjct: 342 RGKTGHLTEPKKTLASVIKTHNMKPFCIHDLRRTFITYA--KGVAPAMAVDNLVGHKTQT 399 Query: 427 LAEKHYRRRPLDLLRKWHEKIETWILNEAGITIKN 461 ++ KHY + LR+ E I +L + +K+ Sbjct: 400 VSAKHYEFPTPESLREPMETITAKLLELSMNVVKS 434 >UniRef50_D0SJJ0 Phage integrase n=6 Tax=Acinetobacter RepID=D0SJJ0_ACIJU Length = 406 Score = 243 bits (621), Expect = 9e-63, Method: Composition-based stats. Identities = 65/443 (14%), Positives = 137/443 (30%), Gaps = 64/443 (14%) Query: 33 FTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIGNINDW 92 + +++ +K + DA+ + R +G K + + K +++G Sbjct: 2 LSDTKIKNLK--PQEKMYRILDAERLYIEVR-PTGKKVWRLKYTLHSKEGTISLGEYPSV 58 Query: 93 KIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRT 152 + +AR + ++ L+ GI+P K E TF E+Y+ E Sbjct: 59 SLAEARKKKEEIKVLLKDGINPVQEKRKLHQE------NLIANSNTFKAIAEEYIVEGMK 112 Query: 153 GISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAW 212 S + D ++ + P+ E+T I + Sbjct: 113 YKSKDYIDQFKRSMEKD----------------------IYKAIGHKPIREVTSADILSI 150 Query: 213 LSTERQN---------RPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVP 263 L + +K++ + + D P Sbjct: 151 LKNTITRVRKLSHYGTGEAAANQNRLFISLVMKYAIVTLRAEN----DPTYAVKNAIESP 206 Query: 264 VSASKADDCLQKEQLKSWFSAVRSLNNPIA-SAYLQVLLLTGARREEIASLRWSDVDFKW 322 ++ L K++ + + ++ T R EI ++WS VDF+ Sbjct: 207 --ETEHARPLDKDERIRLRTRLELYGGTTTVRNACLAMMYTMLRASEIRRMQWSYVDFEE 264 Query: 323 SSMRIKD-----------KIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKS 371 + K ++P++ + LL + +VF + K+ Sbjct: 265 RLIEFPKASRRRKQERSNKKNHIHLVPMSDQLFALLKEQFEISQYQT----YVFSAPFKN 320 Query: 372 GKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKH 431 +++ R+ NRALV +P ++ H R + TL + + + H Sbjct: 321 DEML-ARTTLNRALVFIGMPEVTTHDFRATASTLLNEKGYKPDWINKQLAHVEENKTRAT 379 Query: 432 YRRR-PLDLLRKWHEKIETWILN 453 Y L+ RK + + + Sbjct: 380 YNHAKYLESRRKMLQDWADIVDS 402 >UniRef50_UPI0000E0FEDC DNA integration/recombination/inversion protein n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0FEDC Length = 418 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 67/453 (14%), Positives = 134/453 (29%), Gaps = 67/453 (14%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNI 89 T ++ K + D+ L SG K++ + TIG Sbjct: 1 MALTDTAIKNAK--PKTKAYKMSDSG--GLFLLIKPSGYKSWKYDFRINSTRGSYTIGKY 56 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 D + AR E + + L+ GI+P+ K + E FS +L + Sbjct: 57 PDISLKQARQEHLQARELVAQGINPKQIKTQRKVNDELQTKR-------FSYYMNQWLNK 109 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 ++ T + R + L ++E T + Sbjct: 110 QV--LAESTFKDLKQR----------------------IDKNLIPFLDKKNINEYTTADL 145 Query: 210 AAWLSTERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 + + + R + GII + AQ +++P + Sbjct: 146 LKIMLSISDRGAKETAIRLANVARRVFN----EVLILGIIETNPAQGL--AELLPKPDKR 199 Query: 269 AD----DCLQKEQLKSWFSAVRSLNNPIASA---YLQVLLLTGARREEIASLRWSDVDFK 321 D E+LK + + + + A L+++ L R I L+W ++F Sbjct: 200 IDNNFGHITSTEELKILLNQIDAPSARQDFAVTQALKLMPLVFLRPYNIRFLKWEYINFD 259 Query: 322 WSSMRIKD---KIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPR 378 + +++ K +PL +L + Q +VF + + Sbjct: 260 ENIIKLPATELKNNKPLDVPLATQAVTILKQMQQVTGHKT----YVFVTAQGKDTPLSEN 315 Query: 379 SAHNRALVLA--------ELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEK 430 + N + +++ HG R + T+ + I+ + H Sbjct: 316 TTTNALKRIINPTTNKPYGTGYMTSHGFRHTASTMLNELGYEADIIELQLAHTNKDRIRA 375 Query: 431 HYRRRPLDLLRKWHEKIETWILNEAGITIKNNV 463 Y + R ++ W GI N+ Sbjct: 376 TYNKAKWMNKRIAM--MQDWADYLDGIKAGTNI 406 >UniRef50_B6BKY5 DNA integration/recombination/inversion protein n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BKY5_9PROT Length = 400 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 63/440 (14%), Positives = 137/440 (31%), Gaps = 54/440 (12%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRM 84 MA + + T +++ +K L D L +G K + F+ Y K ++ Sbjct: 1 MARTVKPLTETQIKNAKA--KEKTYILSDGA--GLYLEVNINGGKWWRFRYKYNDKIKKV 56 Query: 85 TIGNINDWKIDDARAEARRLQTLIDT-GIDPRIAKAVKIAEAESLQAESRKTKVTFSVAW 143 ++G D + +AR + + ++ DP + + + TF Sbjct: 57 SLGVYPDTTLANARRKRDEARNILANDNRDP--------FIKIVVHKKEEVVQKTFQEWA 108 Query: 144 EDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSE 203 E Y+ E+ T +S R + + +++ Sbjct: 109 EWYITEISTELS----------------------DTHITRTVKGFKKDVYPIIGSKRMND 146 Query: 204 LTPDYIAAWLSTERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMV 262 + I + ++ + + + + I + D + ++ Sbjct: 147 IKARDIIKIMHIMKERGAVESARKTFSSINRVF--AKALSNFPDEIDRNPTADIKLGDIL 204 Query: 263 PVSASKADDCLQ-KEQLKSWFSAVRSLNNPI-ASAYLQVLLLTGARREEIASLRWSDVDF 320 + + ++L + A++ L ++ T R I RW ++DF Sbjct: 205 GAKQTTNYPIITEPKELATLLKAIKEYTGDTSTILALTMIAHTFVRPINIRLARWDEIDF 264 Query: 321 KWSSMRIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEP 377 I K + E I+PL+ V ELL + VF S + Sbjct: 265 NTKQWVIPASKMKTKKELIVPLSKQVIELLKEAK-------SDSALVFPSIRSKTSPMSD 317 Query: 378 RSAHNRALVLAE-LPHISLHGLRRSFGTLAEWVE-VPTGIVAQIMGHKP-SALAEKHYRR 434 + + I H R F T+A ++ + H S++++ + R Sbjct: 318 NALVGALRRMGYSREEIVAHSFRGIFSTIAHEKGIYAHDVIETQLAHTVGSSVSQAYNRA 377 Query: 435 RPLDLLRKWHEKIETWILNE 454 + L+ K + ++ Sbjct: 378 KYLEERTKMMQWWSDYLTTL 397 >UniRef50_B3E8B2 Integrase family protein n=1 Tax=Geobacter lovleyi SZ RepID=B3E8B2_GEOLS Length = 421 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 70/454 (15%), Positives = 134/454 (29%), Gaps = 96/454 (21%) Query: 38 LRRFTLPEGKKQTFLWDADVTTLACRATS-----------GAKAFVFQSVY-AGKTLRMT 85 LR + +K + D + + GAK ++ + GK R+ Sbjct: 10 LRSNKVNSKEKTFEINDTKLKGFTLKIYPDTVSKKGEIIPGAKTYLVRYRLPGGKQSRII 69 Query: 86 IGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWED 145 IG + AR +A ++ I GI+P++ K S ++ Sbjct: 70 IGRHTLYTPAQARDKAEKILRNIKDGINPKVEKQH----------------PKVSHTFKS 113 Query: 146 YLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 +L++ + + ++ + + L LPL+E+T Sbjct: 114 FLEDEYSPWAEAQRKD--------------------GKATVKRLKSRFSDFLELPLTEIT 153 Query: 206 PDYIAAWLSTERQ--NRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVP 263 P + W + + RP ++AF+ + + + K + Sbjct: 154 PLIVDKWRTGRLKDSKRPATCNRDLTAIKAFLSKAVEWEHLEH-------HPLAKVKPLK 206 Query: 264 VSASKADDCLQKEQLKSWFSAVRSLNN------------------------------PIA 293 V + L ++ K A+ Sbjct: 207 VDSVAKVRFLSADEEKRLLKALDDREEVARAERATANLWRKERGYPLYTDLNSVSFADHL 266 Query: 294 SAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI---KDKIEGERIIPLTPYVSELLNVL 350 + V L TG R E+ASL W VD K + + + K K R +PL L Sbjct: 267 KPMILVSLNTGIRWGELASLAWDSVDMKKALVTVIGDKAKSGKTRHVPLNSIALNALKDW 326 Query: 351 AQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVE 410 + + VF + + L A++ + H +R F + Sbjct: 327 KKQSS-----GDVVFPGRDGKKTLDNVNKSWKAVLDAAQIKNFRWHDMRHHFASWLVMAG 381 Query: 411 VPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWH 444 V V +++GH + + Y + Sbjct: 382 VDLNTVRELLGHSDLKMTLR-YAHLAPEHKAAAV 414 >UniRef50_C1TL52 Integrase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL52_9BACT Length = 378 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 55/429 (12%), Positives = 130/429 (30%), Gaps = 60/429 (13%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAGKTLRMTIGNI 89 T ++R +K+ + D++ L T G K + + G+ ++ T+G Sbjct: 1 MALTNVEIKRA--TPREKRYTMRDSE--GLWLEITPAGKKTWKVRFKAQGREIKHTLGRY 56 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 D + +AR + ++ + + TF E++ + Sbjct: 57 PDISLKEARLKRDEIRLELVN--------------------HKSVPEGTFKALAEEWFER 96 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 + R + + L L + P +++ + Sbjct: 97 QVVPV---------------------RTHGHARTIRSRLDRLILPYLGDKPPADIDAPEL 135 Query: 210 AAWLSTERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 A L +++ +++ + + I DL RK Sbjct: 136 LAILRRIEDQGHVETAHRVSQIVGQVLRYGIATGQARHDITADLKGALIPRKPEHFPTLT 195 Query: 269 ADDCLQKEQLKSWFSAVRSLNNP-IASAYLQVLLLTGARREEIASLRWSDVDFK-WSSMR 326 +++ A+++ + + + + T R E+ W ++D W Sbjct: 196 -----DPKKIGGLMRAIQAFSGSVVVRCAMLFQIYTAVRPGEMRKAEWKEIDGDLWKIPA 250 Query: 327 IKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALV 386 + K ++PL+ +L + +F S + I + + Sbjct: 251 ERMKKRRPHLVPLSSQAIGVLEEIR----PLTGGGELIFPSVRSKTRPISDMTVNAALRR 306 Query: 387 LAELPH-ISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRP-LDLLRKWH 444 + + ++ HG R F T+A + P+ ++ + H Y LD R+ Sbjct: 307 MGYAQNELTGHGFRAMFSTIANECQWPSNVIELQLAHVDKNSVRAAYNHAELLDKRRELL 366 Query: 445 EKIETWILN 453 + W+ Sbjct: 367 QWWGDWLDG 375 >UniRef50_D2LIX3 Integrase family protein n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LIX3_RHOVA Length = 392 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 72/429 (16%), Positives = 134/429 (31%), Gaps = 47/429 (10%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIGNIN 90 + ++R T ++ L DAD L R +G+K + + GK + IG Sbjct: 1 MALSDLKIR--TTKPTERDFKLSDADGLYLLVR-PNGSKLWRLNYRHLGKNKTLAIGKYP 57 Query: 91 DWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQEL 150 D + AR + + L+ G+DP K V++A+A+ TF E+YL L Sbjct: 58 DIALSTARDKRAEARRLLAEGVDPSYRKQVEVAKAKVA------AANTFEAVAEEYLASL 111 Query: 151 RTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIA 210 S T R L P++EL P I Sbjct: 112 ARDRSEGTVRA----------------------NSHILRKKVYPLLGRRPIAELRPHEIL 149 Query: 211 AWLSTERQNRPT-VTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKA 269 L + + A L+ + + + P D R + Sbjct: 150 EALQSIEDRGQVDMAHRARTLIGKVFQLAALSDRA----PTDPTVVLRGRLKSWRVQN-R 204 Query: 270 DDCLQKEQLKSWFSAVRSLN-NPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIK 328 ++ + + +P A + L T R E+ WS++D + RI Sbjct: 205 ASVTSEQTFAPLLRRIDTYEGSPNVRAAMLFLAHTFVRTVELRFATWSEIDLEDGVWRIP 264 Query: 329 ---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRAL 385 K+ +PLT +L +A+ ++F S ++ + Sbjct: 265 EERMKMGRPHDVPLTASTRAILRDMAKFRR-----GDYIFVSAHVGKSVLGDGTLRKAMK 319 Query: 386 VLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRR-RPLDLLRKWH 444 + ++ HG R S ++ + ++ + H + Y R + Sbjct: 320 SIGYQGRMTPHGFRSSASSILNERGYRSDVIEMQLAHVEKNAVRRAYNRTLYWNERVSMM 379 Query: 445 EKIETWILN 453 + + Sbjct: 380 QDWSNLVDG 388 >UniRef50_C8NCE3 Phage integrase family site-specific recombinase n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NCE3_9GAMM Length = 401 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 70/439 (15%), Positives = 135/439 (30%), Gaps = 48/439 (10%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAG--KTLRMTIG 87 T + R P+ + +D L + TS G K + G K ++ G Sbjct: 1 MALTETQCRTAAAPDKNVR-KYFDGG--GLCLQVTSDGKKYWRLYYRMPGSKKQQTVSFG 57 Query: 88 NINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYL 147 + AR ++ LI GIDP K+A + Q + + TF+ + +L Sbjct: 58 VYPKVSLKQARQRRDEVKLLIARGIDP------KLAAKQLRQDRTVALENTFADVAKRWL 111 Query: 148 QELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPD 207 + + G + ++ + + + P++E+ P Sbjct: 112 EHRA--------------------EVKKWGKQHQRATRSMLERYMYPRIGDYPVTEIEPT 151 Query: 208 YIAAWLSTERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSA 266 I L + + +++ I + A D + + S Sbjct: 152 QILRVLQELQAAGKIETSHKLLSATTQVFRYAM---ITIRICKYNPAADLSELLVTGKSV 208 Query: 267 SKADDCLQKEQLKSWFSAVRSL-NNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSM 325 ++ A+ +P A ++ L R EI +RW ++DF+ Sbjct: 209 PFRH-ITDPGEIGRLLVALDEYTGSPQARGLARLHPLIFTRPTEIRLMRWDEIDFEQRLW 267 Query: 326 RIKDKIEGERI----IPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAH 381 R D R +P + E++ L + +VF N K + Sbjct: 268 RRSDDETVRRKNVNAVPFSRQAWEIIAGLRLV----TGRTDYVF-CNIHRNKPFSAGAEG 322 Query: 382 NRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRR-RPLDLL 440 + I HG R + TL + + V + +GH Y L+ Sbjct: 323 KVLKSIGYHEKIVPHGWRHTASTLLHNQDYDSIWVEKQLGHTDKNEVRGTYNHADYLEQR 382 Query: 441 RKWHEKIETWILNEAGITI 459 RK ++ ++ Sbjct: 383 RKMLQEWADYLDMLKANVK 401 >UniRef50_Q2N8A1 Symbiosis island integrase n=12 Tax=Bacteria RepID=Q2N8A1_ERYLH Length = 409 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 64/433 (14%), Positives = 135/433 (31%), Gaps = 47/433 (10%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNI 89 T +R+ K L D+ + L +G K + + G+ ++ IG Sbjct: 1 MVLTDVGIRKAKAGP--KAYKLSDS--SGLFLLVERTGGKLWRMKYRIDGREKKLAIGRY 56 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 + + +AR + + G DP K + A A+ + F+ ++ ++ Sbjct: 57 PEIGLAEARRRRDAAREQLAQGKDPSREKQRQKARAKLGAENN------FASLAAEFCEK 110 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 + S + R + +S+ +LP++++ P I Sbjct: 111 RKHDGSRAWAPATAKR-------------------CEYLLSVLNSSIGHLPIADIEPADI 151 Query: 210 AAWLSTE-RQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 + + + +L + +++ + + D +D M P Sbjct: 152 LTAVRRIESKGKLESAKRTLQLAGSVFRYAVATARLK----SDPTRDLRGALMNPTVTHY 207 Query: 269 ADDCLQKEQLKSWFSAVRSLNN-PIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI 327 L A+ PI +Q+ R E+ WS++DF + I Sbjct: 208 G-AVLDPAGAGELLRAIDGYEGQPITKLAMQLAPHVFVRPGELRHAEWSEIDFDEALWTI 266 Query: 328 K---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRA 384 K+ + ++PL+ +L + + D G+VF S + + + + Sbjct: 267 PASKTKMRKDHLVPLSRQAIAILEMAHRLTGPD----GYVFPSVRTRKRPMSDNTINAGL 322 Query: 385 LVLAELPH-ISLHGLRRSFGTLAEWVE-VPTGIVAQIMGHKPSALAEKHYRR-RPLDLLR 441 L ++ HG R TL + + H S Y R Sbjct: 323 RRLGYATDEMTAHGFRAMASTLLNESGKWNPDAIEGALAHGDSDKVRAAYHRGAHWKERV 382 Query: 442 KWHEKIETWILNE 454 K + ++ Sbjct: 383 KMMKWWSDYLDQL 395 >UniRef50_Q0TL05 Phage integrase n=6 Tax=Escherichia coli RepID=Q0TL05_ECOL5 Length = 439 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 92/461 (19%), Positives = 171/461 (37%), Gaps = 70/461 (15%) Query: 35 FERLRRFTLPEGKKQTFLWDA--DVTTLACRATSGA--KAFVFQSVYAGKTLRMTIGNIN 90 +L T+ + +K+ L R G+ K+++++ A K ++T+G+ Sbjct: 8 DRQLASLTVTKEEKEILFAVKSKAGGGLFIRVRYGSDNKSWIYRYRIAQKPAKLTLGSYP 67 Query: 91 DWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQEL 150 + AR L+ GIDPR + + + + + +S W+D+++ Sbjct: 68 AMGLAQARKAHADAIELVRKGIDPRHIRKNEK--------QKNEQMIIYSELWKDWIEFR 119 Query: 151 RTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIA 210 KT +P STR +AD+ R E +L NL + ELT I Sbjct: 120 ------KTSKPISTRTLADYEGTYHRHLEK--------------ALGNLRIDELTKSVIF 159 Query: 211 AWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKAD 270 LS R+ +L + +N QG++ + A+ + Sbjct: 160 EHLSNVRKTSSEAVRKGLIILNMTLDHAN----LQGMLEHNPARLLKPAMFGASMNKPRE 215 Query: 271 DCLQKEQLKSWFSAVRSL-------------------NNPIASAYLQVLLLTGARREEIA 311 L + +L+ + A+ + + L++++ TG RR E A Sbjct: 216 RWLPENELRMLWKALDDATVGGGSIASGGYGISSSVVLSHSVANALRLIIFTGVRRSEAA 275 Query: 312 SLRWSDVDFKWSSMRIKDKIEGE-RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSK 370 +RW ++ + I G+ I+ L PY+ L+ + + +VF S SK Sbjct: 276 QMRWDQINGER--WTIPATKNGKSHIVTLHPYMLSLIKTQRE-----FTEGAYVFGSTSK 328 Query: 371 SGKIIEPRSAHNRALV-----LAELPHISLHGLRRSFGTLAEW-VEVPTGIVAQIMGHKP 424 I + LAEL S H LRRS T ++ P ++ ++ H P Sbjct: 329 PDFPITNDALTRALERVRSKYLAELTPFSPHDLRRSVATGCAEYLDAPERLIELLLNHVP 388 Query: 425 SALAEKHYRR-RPLDLLRKWHEKIETWILNEAGITIKNNVD 464 + Y+ + + L+ + +I+N +N D Sbjct: 389 KDRLIRTYQVGQQAEKLKNLFIEWGNFIMNNVITVQQNAPD 429 >UniRef50_Q2W9L7 Integrase n=1 Tax=Magnetospirillum magneticum AMB-1 RepID=Q2W9L7_MAGSA Length = 409 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 67/442 (15%), Positives = 143/442 (32%), Gaps = 49/442 (11%) Query: 28 LSRQKFTFERLRRFTLP-EGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMT 85 +++ T ++ + D+ L R SG K + + + +R T Sbjct: 1 MAK-ALTDSVVKTLKPERGATTWREISDSGCRGLRLRVSPSGEKVWAVKVTVGAQRVRHT 59 Query: 86 IGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWED 145 IG + +AR A G P + L A R +T ++A + Sbjct: 60 IGAYPAVSLGEARKRAEAYLATARDGASP-----------DELDARQRAETMTVTMAHSE 108 Query: 146 YLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 Y++ +R+ + A T H+ + + + Sbjct: 109 YIEAMRSSLRASTI-SLKKTMFKTHVEGALGKRLIRTVRRSDVVDVVG------------ 155 Query: 206 PDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVS 265 + P + + A ++W + G+ + Sbjct: 156 --------GVSAKGFPVQANRVFSEVMALLRWCEQKGYVDGVPSAR--KKDVRAATGGAK 205 Query: 266 ASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSM 325 L + ++ + ++ + + + +L++LLLTG RR+E+ + W +VD S Sbjct: 206 ELARRRVLSEGEIIAVWN-LTANMGDLTGDFLRLLLLTGQRRDEVRLMVWGEVDMDASLW 264 Query: 326 RIKD---KIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHN 382 I K +PL ++L G+V ++ SA Sbjct: 265 TIPASRYKTGYSHTVPLPKQAMDILRSRW-----VEGATGYVLAGRGENKPFNGAASAVR 319 Query: 383 RALVLAELP-HISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLR 441 R +LH +RR+ T + + ++GH P + + + + ++ R Sbjct: 320 RLRKELGGKADFTLHDIRRTLRTGLARMGIDETTAEMVIGHIPQGIVKVYDQHDRMEERR 379 Query: 442 KWHEKIETWILNEAGITIKNNV 463 ++ ++ A T+ +NV Sbjct: 380 TALKRWAEYVERVA--TVGSNV 399 >UniRef50_B7NKE6 Integrase of prophage n=42 Tax=Enterobacteriaceae RepID=B7NKE6_ECO7I Length = 416 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 72/437 (16%), Positives = 144/437 (32%), Gaps = 48/437 (10%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYA-GK--- 80 M+ + K + +LR+ +K FL D L+ R TSG + F G+ Sbjct: 8 MSRALNKLSDTQLRKINGTPAQKTAFLNDGGN--LSVRHSTSGLLTWYFTYRAGTGRGAP 65 Query: 81 TLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFS 140 R+ +GN D + AR +A + + + G +PR + VT Sbjct: 66 PERIKLGNYPDLSLKSAREKAAQCRAWLAEGKNPRHELNY--------TVQEALKPVTVG 117 Query: 141 VAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLP 200 A +L+ + + + + +P Sbjct: 118 DALTYWLESYAKENRVDYAA-----------------------LKKRLNNHVIQHIGAMP 154 Query: 201 LSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRK 260 L + + A + P + + +K+ ++ ++ D +V Sbjct: 155 LDKCELRHWLACFDQVAKRTPVTAGFLLQTCKQALKFCRRRRYAI----SNVLDDMSVAD 210 Query: 261 MVPVSASKADDCLQKEQLKSWFSAVRSL-NNPIASAYLQVLLLTGARREEIASLRWSDVD 319 + + L ++L A+ +P A +++L++ G R E+ S+ D Sbjct: 211 VGKKPDIS-ERVLSTKELGELLQALDKKIFSPYYIALIRLLIVFGCRTVELRLSEISEWD 269 Query: 320 FKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRS 379 F + + ++ P +L + Q + + + + + Sbjct: 270 FTEMLWTVPKEHSKTKVAIFRPIPEAILPFVTQLVEQNRHTGLLL----GEVKQETSVSQ 325 Query: 380 AHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDL 439 A PH SLH +RR+F T+ + V +V Q+ GH+ + + R LD Sbjct: 326 YGRLAHRRLNHPHWSLHDIRRTFTTMLSDLGVDPHVVEQLTGHQMPGMQRVYNHSRYLDA 385 Query: 440 LRKWHEKIETWILNEAG 456 R + + AG Sbjct: 386 KRNALDMWTERLGILAG 402 >UniRef50_Q083S5 Phage integrase family protein n=3 Tax=Shewanella RepID=Q083S5_SHEFN Length = 403 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 60/430 (13%), Positives = 136/430 (31%), Gaps = 51/430 (11%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAGKTLRMTIGNI 89 + +LR + + D D L+ R ++ G + ++ + R+T+G Sbjct: 1 MSLSDTQLRSINGKPYTGKPEIADRD--GLSVRISNAGTITWQYRFRFRSSVGRLTLGRY 58 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 D K+ +AR L+ + DPR+ Q +R+ KV E +L + Sbjct: 59 PDVKLSEARKFVPELRNALANDTDPRVY---------WKQRNTRRGKVNVRYCCEQFLLK 109 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 + + T Y Q + + + ++T Sbjct: 110 QGSSLKPGTIATY----------------------QSCFRVHLFDAFDDRLVDDITLGEW 147 Query: 210 AAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKA 269 + + + + + L+ + WS ++ + + L + +++ Sbjct: 148 IDFFDEKSKVSRVTSGAILKQLKTILNWSVRRQLIKSVDVLQLRVS-----DIGSASTVG 202 Query: 270 DDCLQKEQLKSWFSAVRSLN-NPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIK 328 L + + + + ++ ++TGAR E+ +D D + Sbjct: 203 SRVLTVLECGRIWRELDKTRATRTITNSIKACMMTGARVSELLKSSRADFDLDSMVWTVP 262 Query: 329 ---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKII---EPRSAHN 382 K P++P + ELL W F + + + + Sbjct: 263 VINSKTNQPIRRPISPALLELLQEQWSLHR-----SQWTFPAPNDFKRPVGIASVNKLVR 317 Query: 383 RALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRK 442 ++P LH RR+ T + V + +++GH + + + LD Sbjct: 318 EIRPRVDIPDWRLHDFRRTISTRLSELGVLPHVTEKMLGHVLGGVMAVYNKHDWLDEQAA 377 Query: 443 WHEKIETWIL 452 ++ +L Sbjct: 378 AYQMWTEKLL 387 >UniRef50_Q2NBN1 Site-specific recombinase, phage integrase family protein n=3 Tax=cellular organisms RepID=Q2NBN1_ERYLH Length = 390 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 82/424 (19%), Positives = 148/424 (34%), Gaps = 55/424 (12%) Query: 39 RRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDA 97 R LP+ +++ +WD ++ R SG + + + GK R+T+G ++ + A Sbjct: 19 ARRKLPQREREYCIWDTELAGFGLRVRPSGNYFWFVRLRHRGKHRRITLGRTDELEAGLA 78 Query: 98 RAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAK 157 RA+ARR+ P + K T + E Y +L Sbjct: 79 RAQARRILAETALDGLP--------------KRAVVKATPTMTDFVEAYWDDLSRVWKPS 124 Query: 158 TKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTER 217 T + + D + + ++++ P I W Sbjct: 125 TTKRNWDAWRLD----------------------IKPTFGDTRVADILPADIHRWRDGCA 162 Query: 218 QNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQ 277 A +L A +K++ K + R M + L + Sbjct: 163 GESEVKFNRAVPVLSALLKYAEALKMRR-------PGSNPCRGMPRYKRQSVERYLTPAE 215 Query: 278 LKSWFSAVRSLNN--PIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGER 335 + +A+R P A ++LL TGAR EI +LRW V K + + D G + Sbjct: 216 YRRIGAALREAEADRPAEVAIARLLLFTGARVGEIKNLRWEWV--KPPRLLLPDSKTGPK 273 Query: 336 IIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISL 395 +I L ++L V+ + VF + + + + LP + + Sbjct: 274 VIWLNSQAQDVLAVIERRE-----DSELVFPNKTG-KRPVNFDQWWFVFRRRCALPDVRI 327 Query: 396 HGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWILNEA 455 H LR SF + A VP + +++GHK K Y D++ + E+I + Sbjct: 328 HDLRHSFASTAIMENVPLSTIGKLLGHKLVETTAK-YAHLSDDVIGEAAERISGSLAQAI 386 Query: 456 GITI 459 G+ Sbjct: 387 GLRP 390 >UniRef50_A3WST9 Probable integrase protein n=2 Tax=Bradyrhizobiaceae RepID=A3WST9_9BRAD Length = 422 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 81/462 (17%), Positives = 160/462 (34%), Gaps = 69/462 (14%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSV-YAGKTLRMTIGN 88 K T + + F+WD ++ R SGAK+F+ Q G++ R+T+G Sbjct: 2 VKITKRVVDAAEASGADR--FVWDDELPGFGLRVKKSGAKSFLVQYRNANGRSRRLTVGR 59 Query: 89 INDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQ 148 +++AR A+ + G+DP K + + +T +YL Sbjct: 60 YGVLTVEEARRAAKISLADVLKGVDPAENKKLD------------RGAITIETLCREYLD 107 Query: 149 ELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDY 208 + G+ + R + +G + L + ++T Sbjct: 108 KAERGLILTRRGEAKRR-------------STIYTDKGRVERHIVPILGKRTVKDVTTAD 154 Query: 209 IAAWL------------------STERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPG 250 I + A LL + ++ + Sbjct: 155 IRRFQQSVISGKTAADIKTKKRGRAIVTGGKGTAARTMGLLGGILSYAVNEGYR------ 208 Query: 251 DLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLN----NPIASAYLQVLLLTGAR 306 D R ++ + L ++ + + N ++V+ LTG R Sbjct: 209 ---PDNPARGIIRPKDETREWRLDDAGYRALGKKLTAAEANAVNWQPILIMRVIALTGCR 265 Query: 307 REEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFR 366 R EI L +++DF S++R+ D G+ I P+ +L + +K +VF Sbjct: 266 RGEIERLLKTEIDFARSALRLGDSKTGKSIRPIGSAAIAVLK-----QACEKSKSKYVFS 320 Query: 367 S-NSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPS 425 + ++ + + A + A +P ++ HGLR SF + AE + + ++GH Sbjct: 321 ALTNEKKRYVGLPKALASIVGDA-VPGLTPHGLRHSFSSTAEDLGFSLPTIKALLGHAGG 379 Query: 426 ALAEKHYRRRPLDLLRKWHEKIETWILNEA-GITIKNNVDMR 466 ++ E Y + L ++I + I G + V +R Sbjct: 380 SVTEG-YIHKIDTALVAAADRIASHIETAMTGKKAEKVVQLR 420 >UniRef50_B2HWC8 Integrase n=6 Tax=Acinetobacter RepID=B2HWC8_ACIBC Length = 457 Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 89/443 (20%), Positives = 158/443 (35%), Gaps = 49/443 (11%) Query: 29 SRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIGN 88 KFT + L E +KQ F D F + + GK+ R IG Sbjct: 3 QHIKFTKSVIDSIPLSE-EKQIFYRDTVTIGFGLCVGKTKSYFAEKKMPNGKSKRKVIGK 61 Query: 89 INDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQ 148 + ++ AR EA+RL L+D G+DP K A A A +K T S A++ Y Sbjct: 62 HGVYTLEQARTEAKRLLILMDEGVDPVKQKRDLRASAIQNDA-LQKLVPTLSEAYQYY-- 118 Query: 149 ELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDY 208 L + E+ + +L L ++T Sbjct: 119 -----------------------KLRKKLAETSLIAYDGCIENYFSDWKDLKLDQITSAM 155 Query: 209 IAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQG----IIPGDLAQDYNVRKMVPV 264 I + P+ A + L A + + K + + + K Sbjct: 156 IIDRHLKLSKASPSRANLASKFLHALFNHTISRYKDESGNKILNIKNPVVIVKEEKAFNK 215 Query: 265 SASKADDCLQKEQLKSWFSAV----------RSLNNPIASAYLQVLLLTGARREEIASLR 314 + + +Q ++W AV +L +L LTG RR E S+ Sbjct: 216 IKRRKGHV-RADQREAWALAVATTYWMGEQNNDFRAYTNQDFLFLLALTGFRRSEAESVE 274 Query: 315 WSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKI 374 W +VD ++ +++I + E L + + L + + +VF + I Sbjct: 275 WKNVDLQFGTIKIINTKNHED---LLLPMGDTLWHIMRERKKRAGDNKYVFTDRNGVSHI 331 Query: 375 IEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKH--- 431 + R+A ++ + + + H LRR+FGT+A + + + + +++ H Sbjct: 332 SDRRAARDKVTENSGIE-FTFHDLRRTFGTIANSLAIGSYTIKRLINHTTDDDDNDVTDG 390 Query: 432 YRRRPLDLLRKWHEKIETWILNE 454 Y + D L+K IE I++E Sbjct: 391 YIQVSFDDLKKAMNMIEDVIISE 413 >UniRef50_Q1VBR2 Site-specific recombinase XerD-like protein n=1 Tax=Vibrio alginolyticus 12G01 RepID=Q1VBR2_VIBAL Length = 396 Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats. Identities = 72/438 (16%), Positives = 147/438 (33%), Gaps = 56/438 (12%) Query: 29 SRQKFTFERLRRFTLPEGKKQ---TFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRM 84 R KFT ++ + + ++++ +G K ++ + G+ + Sbjct: 3 KRFKFTTNKIASLPPNDPNSRSTEAEYSCSELSGFKVLVGKNGRKKWLVRYTLNGRKGSL 62 Query: 85 TIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWE 144 ++G + + DA +A+R + ++ G+DP+ + + T S Sbjct: 63 SLGTFPEVSLADAWKQAQRTKLMVAEGVDPK-------------NSTVKPDIPTVSE--- 106 Query: 145 DYLQELRTGISAKTKRPYSTRYIA-DHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSE 203 Y IS K+ + +H + R + Sbjct: 107 -YFNNHFIKISKSRKKSWRHDIARFNHCVEIWDISYDQLRVS--------------HIQS 151 Query: 204 LTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVP 263 + I ++ + LL+ + + + R + Sbjct: 152 MVAGLIDKVHLRGKKLSRSTINRVLCLLKLMGRMIEEEYSI---------PNVAARVKLF 202 Query: 264 VSASKADDCLQKEQLKSWFSAVRSLNN-PIASAYLQVLLLTGARREEIASLRWSDVDFKW 322 + L +++K F +R + PI S ++ +L + G R + + RW ++D + Sbjct: 203 PETGARERWLSPQEIKRIFEELRKPDYCPIRSRFIILLFMLGCRERSLRAARWPNIDLEN 262 Query: 323 SSMRIK--DKIEG-ERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRS 379 MRI D G + I LTP + L + +VF + I +PR Sbjct: 263 GVMRIPREDSKNGFQHQIQLTPQAIQEFRFLLRLKKK---GNPYVFPGQKEKSHISQPRH 319 Query: 380 AHNRALVLAELPH---ISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRP 436 N+ L I H R S+ + V G++ Q++GHK + + Y R Sbjct: 320 LFNKIKKELMLKEPEQIVFHTARHSYASSLISAGVDVGVLKQLLGHKSISSTMR-YARAG 378 Query: 437 LDLLRKWHEKIETWILNE 454 + LR+ + + I Sbjct: 379 NESLRQSSQVLIQLIDEA 396 >UniRef50_Q1Q875 Phage integrase n=3 Tax=Gammaproteobacteria RepID=Q1Q875_PSYCK Length = 452 Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats. Identities = 63/436 (14%), Positives = 143/436 (32%), Gaps = 59/436 (13%) Query: 33 FTFERLRRFTLPEG---KKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGN 88 + ++R+ + + D L +SG + +V + GK + T+G Sbjct: 2 LSDAKIRKLKPTDKCTPSRPDKYSD--QQGLQLLVRSSGTRTWVSAYRFDGKQQKTTLGT 59 Query: 89 INDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQ 148 + +AR ++ L+ GI+P+ K E + TF+ ++L+ Sbjct: 60 YPQMGLAEARVANADIKALVANGINPKNKKRQDKLANEQAK--------TFNDYAVEWLE 111 Query: 149 ELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDY 208 E + +T + R D + S + L ++T + Sbjct: 112 ERERNVKPRTYQQDYNRMHKD----------------------VIPSFEGIALKDVTFED 149 Query: 209 IAAWLSTERQNR-------PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKM 261 VT L+ ++ + + +I + +++ Sbjct: 150 CKLMADNIESRTNNEGASPREVTRRTIDLVGNILRRAMR----ERLIEVNHTDGL--KEL 203 Query: 262 VPVSASKADDCLQKEQLKSWFSAVRSL-NNPIASAYLQVLLLTGARREEIASLRWSDVDF 320 P + +K ++ +L + + ++ L + R E+ ++W +DF Sbjct: 204 YPKAKTKHMKHVELSELPKLLQDIEGYHGHDQTRLGMKFLAYSFCRTIELRMMKWEHIDF 263 Query: 321 KWSSMRI---KDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEP 377 R+ KI + ++PL+ + +L + + +VF E Sbjct: 264 PNRLWRVDIDNLKIARKHVVPLSDQMLAVLEEMK----HITGQYEYVFYHTGMHQPYSEE 319 Query: 378 RSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGH-KPSALAEKHYRRRP 436 +N +L + HG R T + + + M H K S++ + + Sbjct: 320 F-INNALDILGYGGKQTGHGFRHIASTNLNELGYMGDAIEKQMAHDKKSSIRAVYNHAQH 378 Query: 437 LDLLRKWHEKIETWIL 452 L+ RK + ++ Sbjct: 379 LEERRKIMQVWADFLD 394 >UniRef50_B8F737 Phage integrase family site specific recombinase n=4 Tax=Pasteurellaceae RepID=B8F737_HAEPS Length = 416 Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats. Identities = 75/445 (16%), Positives = 146/445 (32%), Gaps = 54/445 (12%) Query: 30 RQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSV--YAGKTLRMTIG 87 + K ++R+ K L D L R SGAK FVF Y TIG Sbjct: 2 KYKLVGTQIRQAK--PKDKDYPLSDGGGLRLIVR-KSGAKVFVFNYYKPYTKTRTNFTIG 58 Query: 88 NINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYL 147 + + AR E + + L+ IDP + + E ++ + ++TF + Sbjct: 59 EYPEISLIQARKEHAKARALLAQNIDPVRQRELDKQE------QANRLELTFEKMAVKWF 112 Query: 148 QELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPD 207 ++ + +S R D L N P+SE+TP Sbjct: 113 EDRKLK------ADFSERTAKD--------------TWALFKRHILPHFGNYPISEITPL 152 Query: 208 YIAAWLSTERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSA 266 L + + ++++ ++ D+ ++++ Sbjct: 153 IAINALKPLERAGKLETIRKTIAKINEVMRYALHRGLIATNNLSDIGKEFD------KPT 206 Query: 267 SKADDCLQKEQLKSWFSAVRSLNNP-----IASAYLQVLLLTGARREEIASLRWSDVDFK 321 ++ + +Q ++L + A + + ++LLTG R EIA +W D+D K Sbjct: 207 PQSMNTIQPDELAEFLQAFYQKRDKGRFGLNVFYAVMLVLLTGGRPSEIAKAKWEDIDEK 266 Query: 322 WSSMRIKDKIE-------GERIIPLTPYVSELLNVLAQSPNSDVNK--EGWVFRS-NSKS 371 + + I+ L+ ELLN + +VF S SK Sbjct: 267 ERLWAYQVQKGNKNLPEGRTHIVTLSRQSIELLNKMRHFNEVVNANIQSPFVFASVASKK 326 Query: 372 GKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSA-LAEK 430 + + + ++ HG+R F T + + + HK + Sbjct: 327 TGHLSIETMRKAIIKSIGEDRLTTHGIRHLFSTSLNEQNFNADWIERALSHKDRNRIRGS 386 Query: 431 HYRRRPLDLLRKWHEKIETWILNEA 455 + + L+ + ++ A Sbjct: 387 YNKANYLEQRFDMLQHWADYVEELA 411 >UniRef50_C7I5J5 Integrase family protein n=2 Tax=Thiomonas intermedia K12 RepID=C7I5J5_THIIN Length = 401 Score = 240 bits (614), Expect = 7e-62, Method: Composition-based stats. Identities = 74/432 (17%), Positives = 148/432 (34%), Gaps = 53/432 (12%) Query: 28 LSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIG 87 +++ + T + +R+++ +G + T L R G+ + F+ + AGK ++G Sbjct: 1 MAKGQLTAQEVRKWSKVDGLHRV------ATGLYLRVRGGSALWTFRYMVAGKASEQSLG 54 Query: 88 NINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYL 147 I+ + DA A+A ++ I G D + + + S TF Sbjct: 55 PISALTLADALAKAAEVRAKIRRGEDFALRPSATVVPTPSD---------TFEEVALQLW 105 Query: 148 QELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPD 207 + ++ G + + +SE+ + Sbjct: 106 ESMKPGWKNPKHADQWINTLRMY---------------------AFPRFGRKAVSEIGTE 144 Query: 208 YIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMV--PVS 265 + A L+ Q + + + A + + + G P N Sbjct: 145 EVLAALTPIWQTKHETATRLRQRIEAVLSAAKARGLRAGENPAAWRGHLNALLPTISKKR 204 Query: 266 ASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSM 325 K + + ++ ++ + +R N +++ LQ +LT R + WS++D + Sbjct: 205 RVKHFEAMDWREVPAFMAQLRQRAN-MSAWALQFTILTALRTGTVIGTPWSEIDLERRLW 263 Query: 326 RIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHN 382 I K + E +PL+ ELL L + WVF K + Sbjct: 264 VIPAERMKAQVEHRVPLSRQAVELLQALPRQE-----GSDWVFWGARKP----TISNMAM 314 Query: 383 RALVLAELPHISLHGLRRSFGTLAEWV-EVPTGIVAQIMGHKPSALAEKHYRRRPL-DLL 440 L+ P +++HG R SF A P+ V + H + E YRR L + Sbjct: 315 LELLRGMRPGLTVHGFRSSFSDWAAESTHFPSQTVEMALAHMITNQVEAAYRRGDLIEKR 374 Query: 441 RKWHEKIETWIL 452 R+ + ++ Sbjct: 375 RELMQAWGDYLD 386 >UniRef50_A6FVR7 Phage integrase n=3 Tax=Roseobacter sp. AzwK-3b RepID=A6FVR7_9RHOB Length = 390 Score = 240 bits (614), Expect = 7e-62, Method: Composition-based stats. Identities = 58/427 (13%), Positives = 128/427 (29%), Gaps = 50/427 (11%) Query: 30 RQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIGNI 89 + + T +++ + L D V + F +S GK + +G Sbjct: 2 KARLTDHVIKQHQKQLTNGRATLTDTAVKGFFVEIRRRSATFNLRSSIDGKMRVIKLGCF 61 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 + +DAR + + I G A + + +T +ED Sbjct: 62 PELSAEDARQLCLKHKREISVG-------------ASADELAKSTKSITLDQFYED---- 104 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 ++ + + + L ++ + Sbjct: 105 -------------------HYLPWYKTYRRASANIVQMYRSNFHLRFGHRQLHSISQTDL 145 Query: 210 AAWLSTERQNR--PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSAS 267 + +Q P +LR ++ ++ + + + Sbjct: 146 KQLTNEMKQLGYAPGSVNTTVVVLRGMLRRADDWGL------CRIHHSLHKPPNLLPDTK 199 Query: 268 KADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI 327 + + L +++ + +R + + LL TGAR+ E+ + W ++ RI Sbjct: 200 RHERFLSRDEAQKLQVVLRKRGATPVNLAILFLLYTGARKSEVLNAEWRSINMDRCEWRI 259 Query: 328 K-DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEG----WVFRSNSKSGKIIEPRSAHN 382 K R + L+ +L K+ VF + Sbjct: 260 PLSKNGQPRTVILSQKAVAILQSARSYQQRHYGKQAKQVSAVFANPQTLLPYHNIWETWK 319 Query: 383 RALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRK 442 R + A+LP + LH LR S+ + V V +++GH A ++ Y + L + Sbjct: 320 RVRIEADLPDLRLHDLRHSYASTLINAGVSIYEVQKLLGHSHIATTQR-YAHLASERLHE 378 Query: 443 WHEKIET 449 + ++ Sbjct: 379 TVKLLDE 385 >UniRef50_Q21D10 Phage integrase n=3 Tax=Alphaproteobacteria RepID=Q21D10_RHOPB Length = 429 Score = 240 bits (613), Expect = 8e-62, Method: Composition-based stats. Identities = 79/454 (17%), Positives = 152/454 (33%), Gaps = 47/454 (10%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRM 84 MA K T + + ++ D L + G+K+++F+ G+T Sbjct: 1 MARGFGKLTVKTVEHL-----SRRGMHADGG--GLYLQIAEGGSKSWLFRYKLHGRTHWH 53 Query: 85 TIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWE 144 +G++ D +++AR +A + + G DP AK A A A +TF A + Sbjct: 54 GLGSLRDVGLEEAREKATGARKVRRNGGDPIQAKRQAEAAARIEAA----KAITFGEAAK 109 Query: 145 DYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSEL 204 +++ R G + + P+ ++ +LP+ + Sbjct: 110 RFIKANRAGWKNAKHADQWVMTL-----------LGVDQKGKPSKNDYCKTIRDLPIGAI 158 Query: 205 TPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYN--VRKMV 262 + + ++ + I + + ++ G P + + Sbjct: 159 DTTLVLRIIEPIWASKTETATRIRSRIEQVIDAAKAKGEFNGENPARWKGHLDNLLPATS 218 Query: 263 PVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKW 322 V + L QL + +R + A+A L+ +LT R + +W +D + Sbjct: 219 KVRKVRNHPALPYRQLPDFMRKLRERDG-AAAAALEFQILTAVRPGNAVAAKWDQIDRQT 277 Query: 323 SSMRIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRS 379 S I K + E +PL+ +L+ + + + ++F + GK + S Sbjct: 278 SVWTIPAALMKSDAEHRVPLSKAALAVLDRMEATKD----DSEYIFPNTK--GKPLSDAS 331 Query: 380 AHNRALVLAELPH----------ISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAE 429 + EL I HG R SF A + + HK S Sbjct: 332 MAAVIDRMNELERRWIDPKLDREIVPHGFRSSFRDWAAEHGYDDPVAEAALAHKVSDEVV 391 Query: 430 KHYRRRPLDLLRKWHEKIETWILNEAGITIKNNV 463 YRR LR +E W A + + Sbjct: 392 AAYRRTTFLDLRNRM--MEDWADYCARPSSSGDT 423 >UniRef50_Q1QA94 Phage integrase n=1 Tax=Psychrobacter cryohalolentis K5 RepID=Q1QA94_PSYCK Length = 413 Score = 240 bits (613), Expect = 8e-62, Method: Composition-based stats. Identities = 73/434 (16%), Positives = 141/434 (32%), Gaps = 52/434 (11%) Query: 31 QKFTFERLRRFTLP----EGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTI 86 T + + + K+ D + L R T G K+++ + GK +TI Sbjct: 1 MPLTHTVINKLQPSSTSIDTKRPDKHSDGNGLQLWVRYT-GVKSWISAYRWQGKQQTLTI 59 Query: 87 GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDY 146 G + +AR ++ LI G++P+ K + A + L F + + Sbjct: 60 GTYPVMSLQNARQRNIEIKRLIADGVNPKDHKKEQQASQDGLNI--------FDNIAQSW 111 Query: 147 LQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTP 206 E +T ++ T + Y+ D S+ ++++T Sbjct: 112 YAERKTYLAESTFTRNYSAYMRDVK----------------------PSIGQKNINDITA 149 Query: 207 DYIAAWLSTERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVS 265 I A + R + K + DLA+ P Sbjct: 150 PDILAIGKAVESRGANEMARRTIREVGQIFKHAIRNGLATHNPATDLAEAIK-----PHK 204 Query: 266 ASKADDCLQKEQLKSWFSAVRSLNNPIASAY-LQVLLLTGARREEIASLRWSDVDFKWSS 324 + + +QL + + + + L L T R EI + WS++D+K Sbjct: 205 TTNHHR-ITSQQLPKLLTDINAYQGDVLVKLGLWFLCYTFVRTNEIRFMEWSEIDYKHGL 263 Query: 325 MRIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAH 381 RI K + I+PL P +L + + SD +VF + S K + Sbjct: 264 WRIPADKMKAKRLHIVPLAPQAMAILEQIKELGFSD----QYVFFNTSTR-KPYSQSAFI 318 Query: 382 NRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGH-KPSALAEKHYRRRPLDLL 440 N + ++ HG R T E + + H + + ++ + + L Sbjct: 319 NALWNMGYKGKMTGHGFRGLASTTLHEKEFMHEAIELQLAHDRENKISAAYNGAQHLPYR 378 Query: 441 RKWHEKIETWILNE 454 + +I + Sbjct: 379 IDMMHQWANFIDDA 392 >UniRef50_B7I6Z3 Site-specific recombinase, phage integrase family n=3 Tax=Moraxellaceae RepID=B7I6Z3_ACIB5 Length = 414 Score = 240 bits (613), Expect = 8e-62, Method: Composition-based stats. Identities = 69/443 (15%), Positives = 145/443 (32%), Gaps = 54/443 (12%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSV--YAGKTL 82 M + T ++++ E K L D + L + K + F Y K Sbjct: 1 MPKTVVPLTDTKIKKAK-SENGKSLKLSDG--SGLYLLIDKNQNKFWRFDYSRPYTKKRN 57 Query: 83 RMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVA 142 + G+ + + DAR++ +TL+ IDP++ + E + + TF+ Sbjct: 58 TIGFGSYPEVSLADARSKRDEARTLLAQNIDPQVERKRVEQEHINSEKN------TFAAV 111 Query: 143 WEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLS 202 ++ ++K+ ++ I H L + + P+ Sbjct: 112 AAEW----------ESKQDFAESTIRGHKRLLQVINSN---------------IGKKPID 146 Query: 203 ELTPDYIAAWLST-ERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKM 261 ++TP + E+Q + +++ + + + DL R Sbjct: 147 KVTPVEVLNICRIYEKQGKLETAKKVKVKCGQIMRYGVATGRCERDVTQDL------RGA 200 Query: 262 VPVSASKADDCLQKE-QLKSWFSAVRSLNN-PIASAYLQVLLLTGARREEIASLRWSDVD 319 + K L + + + I L++ R E+ +W D+D Sbjct: 201 LKTPKVKHLSALTESNEFAELLYDIDFYEGTFITQMALKIAPYVFVRPGELRYAKWPDID 260 Query: 320 FKWSSMRI--KDKIEG---ERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKI 374 + R + ++P+ V LL + + + +VF S + K Sbjct: 261 LEIDLWRYTPPKTKNKTGVQHLVPIPRQVKVLLLKIKELTYDPDGESEYVFPSMTSKLKP 320 Query: 375 IEPRSAHNRALVLAEL-PHISLHGLRRSFGTLAEW-VEVPTGIVAQIMGHKPSALAEKHY 432 + + + L + HG R S T+ E + P I+ Q + HK + + Y Sbjct: 321 MSENTINQALRRLGYTSEQVCGHGFRASARTILEEVLNYPIEIIEQQLAHKVKDMHGRAY 380 Query: 433 RRR-PLDLLRKWHEKIETWILNE 454 R L+ R+ + + Sbjct: 381 NRTKHLEKRREMMQSWADYCDQI 403 >UniRef50_A5V414 Phage integrase family protein n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V414_SPHWW Length = 417 Score = 240 bits (613), Expect = 9e-62, Method: Composition-based stats. Identities = 57/433 (13%), Positives = 118/433 (27%), Gaps = 48/433 (11%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNI 89 T ++ G L +D L SG+K + + Y GK + +G+ Sbjct: 1 MPLTHIQIAAAKASNGA----LKLSDGRGLTLVVQPSGSKVWRLKYRYEGKQKTLHLGHW 56 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 I +AR + LI+ G DP + K +F E++L++ Sbjct: 57 PKVGISEARIRREDARKLIEEGTDPALVKR----FGPVAAKVKIVAGNSFRAVAEEWLEK 112 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 + + +L + P+ + P Sbjct: 113 CEREGLS----------------------QVTLNKIRWLLDKAYPALGSKPIEVIRPLDA 150 Query: 210 AAWLSTERQNR-PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 A L +L +++ + + + DL Sbjct: 151 LAVLKKLEAEGILESARRLRSVLSRIFRFAVATGRIERDVAADLRGAIATP-----KGKN 205 Query: 269 ADDCLQKEQLKSWFSAVRSL-NNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRI 327 + A+ + + I + L+ R E+ W ++D + I Sbjct: 206 LAAITTAREAGVLLRAIENYSGHEITAIALECSAHLFVRPGELRQAEWPELDADEAIWAI 265 Query: 328 K---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRA 384 K+ +PL+ + E L+ L + ++F + + + Sbjct: 266 PPEKTKMRRPHWVPLSRQMMEKLHRL----HDLTGGGKYLFPCLGNDDMPMSENTVNLAL 321 Query: 385 LVLA-ELPHISLHGLRRSFGTLAEWVE-VPTGIVAQIMGHKPSALAEKHYRR-RPLDLLR 441 L ++ HG R TL + + + H + + Y R Sbjct: 322 RRLGFGQDQMTAHGFRAMAATLLNESGQWHPDAIERQLAHIETNEVRRAYTRGEYWPERV 381 Query: 442 KWHEKIETWILNE 454 + + I Sbjct: 382 RMMQWWSDHIEEL 394 >UniRef50_A5F3U5 Site-specific recombinase, phage integrase family n=5 Tax=Vibrio RepID=A5F3U5_VIBC3 Length = 411 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 78/444 (17%), Positives = 154/444 (34%), Gaps = 60/444 (13%) Query: 32 KFTFERLRRFTLPEGKKQTFLWDADVTTLACRAT-SGAKAFVFQSVYAGKTLRMTIGNIN 90 K + L+ K L D D L R + G + F+ G + R+ +G+ Sbjct: 3 KLYDKHLKAVLNKSHLKVFTLTDGD--GLGARVSLQGNVRWQFRYKINGASKRVDLGDYP 60 Query: 91 DWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQEL 150 D + AR EA++ + + G DP++ ++V + V+ A E +L E Sbjct: 61 DLSLLKAREEAQKCREWLAEGHDPKLQRSVIR--------QETLKPVSVQDALEYWLVEY 112 Query: 151 RTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIA 210 A + + + LPL++ + Sbjct: 113 AESNRAN-----------------------ADKHRSQFQKHIYPYIGALPLAQTETHHWI 149 Query: 211 AWLSTERQN-------RPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVP 263 R+ P + + + +++ ++ + DL + V Sbjct: 150 ECFDRVRKGIAGKQRPAPVAAGYVLQNAKQALRFCRVRRYATSRVLDDLTVN-----DVG 204 Query: 264 VSASKADDCLQKEQLKSWFSAVRSLNN--PIASAYLQVLLLTGARREEIASLRWSDVDFK 321 K D L ++L ++AV++ N P ++ L++ GAR +E+ +W + DF+ Sbjct: 205 KKQRKKDRVLTAQELSDLWNAVQTPNKFLPYYCHLVKFLVVFGARTQEVRLSKWKEWDFE 264 Query: 322 WSSMRIKD--KIEGERII-PLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPR 378 + E+II P+ + L L + D +KE + + + Sbjct: 265 ALIWTVPKEHSKTDEKIIRPIPDELVPWLLQLKE----DSDKETLILGEEKSPETVSQQG 320 Query: 379 SAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLD 438 L +LH +RR+ T + V +V Q++GH + + R + L Sbjct: 321 RFF--WQRLGHEEAWTLHDIRRTLATRLNELGVAPYVVEQLLGHSLGGVMAIYNRSQYLP 378 Query: 439 LLRKWHEKIETWILNEAGITIKNN 462 R+ + + +T K N Sbjct: 379 EKREALTMW---LEHLDIMTNKTN 399 >UniRef50_B5JZM6 Site-specfic recombinase, phage integrase family n=2 Tax=Rhodobacteraceae RepID=B5JZM6_9RHOB Length = 411 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 85/432 (19%), Positives = 138/432 (31%), Gaps = 59/432 (13%) Query: 29 SRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIG 87 + + +R T P D L + TSGAK +V + V GK + +G Sbjct: 21 PNKALSAAFVRTATTPGK-----YNDG--HGLFLKVVTSGAKRWVQRIVVRGKRTEIGLG 73 Query: 88 NINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYL 147 + + + +AR A + L G DP AK A +TF A Sbjct: 74 SASLVSLAEARETALENRKLARAGGDPLQAKRTSEA------------LLTFEEASRKVH 121 Query: 148 QELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPD 207 + K + + + NL +SE+T Sbjct: 122 KIHEPTWRNKKHAAQFLSTLETY---------------------TFPRMSNLKVSEVTTA 160 Query: 208 YIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSAS 267 + A L +P + + +KW+ Q + A + Sbjct: 161 DVLAVLQPIWLEKPETAKRVRQRIGTVMKWAVANGWRQD----NPAGAISQALPKQKQPV 216 Query: 268 KADDCLQKEQLKSWFSAVRSLNNP-IASAYLQVLLLTGARREEIASLRWSDVDFKWSSMR 326 K L +++ AVRS L++ +LT R E+ WS++D + Sbjct: 217 KHRKSLPYDEVSGCLVAVRSSRAFNATKLALELTVLTACRSGEVRLAEWSEIDLAKAEWT 276 Query: 327 IK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNR 383 I K E IPL+ E+L + + G VF S + G + + Sbjct: 277 IPAQRMKASKEHRIPLSGRAVEVLEA----AKALDDGTGLVFPSTT--GNPLSDMTLSKL 330 Query: 384 ALVLAELPHISLHGLRRSFGTLAEWVEVPTGIV-AQIMGHKPSALAEKHYRRRPL-DLLR 441 L + +HG R SF T + V + H AE Y R L + R Sbjct: 331 VKGLGY--DVDVHGFRTSFKTWCQERTTTAREVSEAALAHSIQNKAEAAYARSDLFEKRR 388 Query: 442 KWHEKIETWILN 453 K E+ ++ Sbjct: 389 KLMEQWSCFVAE 400 >UniRef50_Q8EJS4 Site-specific recombinase, phage integrase family n=2 Tax=Gammaproteobacteria RepID=Q8EJS4_SHEON Length = 429 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 76/452 (16%), Positives = 143/452 (31%), Gaps = 68/452 (15%) Query: 29 SRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGA------KAFVFQSVYAGK-- 80 +++ T L T K T L D+ LA RAT ++F+ G+ Sbjct: 3 TKKNMTNTALVSLTNKPLDKPTTLSDSG--GLAARATPAKDGKGNNVLWIFRYRMGGRET 60 Query: 81 -TLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTF 139 + G D K+ AR + R + I G DP+ L+ +T Sbjct: 61 PQRTIVFGKYPDLKLAGAREKRERCKVWIADGKDPKTQ--------LELELSKAVKPLTV 112 Query: 140 SVAWEDYLQELR--TGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLL 197 + ++++ E ++A + R+ + L Sbjct: 113 AEVLDNWISEYANGKRVNASKHKQQFERW-------------------------IVPHLG 147 Query: 198 NLPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYN 257 +LPL+E+ + A L Q P + R L+ +KW D+ D Sbjct: 148 SLPLAEIKKPHWIAALKKRSQKYPVAAGYVLRNLQQALKWCAKSGHEFDRSVFDIDLDDI 207 Query: 258 VRKMVPVSASKADDCLQKEQLKSWFSAVRS-LNNPIASAYLQVLLLTGARREEIASLRWS 316 K + + + ++L + + P L +L+ GAR +E+ Sbjct: 208 GAKHQAKRSQRLVEDDSWQRLIDLLKWIEAGEMLPYYKNLLILLITFGARTQELRLATTK 267 Query: 317 DVDFKWSSMRIKDKIEGER------------IIPLTPYVSELLNVLAQSPNSDVNKEGWV 364 + +F+ + + + P+ + LL L + NK G++ Sbjct: 268 EFNFETGVWTVPAEHNKTQAKDQARGDSGEIKRPIPDSIKPLLVAL-----CEANKGGYL 322 Query: 365 FRSNSKSGKIIEPRSAHNRALVLAELP-HISLHGLRRSFGTLAEWVEVPTGIVAQIMGHK 423 + + + LH LRR+ T + V +V ++GH Sbjct: 323 L---GEFKEPTAVSAWGGNIWKKLGHEQKWRLHDLRRTVATGLNDLGVAPHVVESLLGHS 379 Query: 424 PSALAEKHYRRRPLDLLRKWHEKIETWILNEA 455 +A + R L R+ E + Sbjct: 380 IQGVAGIYNRSHYLPEKRQALELWCNRLDELL 411 >UniRef50_Q2SP99 Integrase n=2 Tax=Gammaproteobacteria RepID=Q2SP99_HAHCH Length = 416 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 79/448 (17%), Positives = 160/448 (35%), Gaps = 57/448 (12%) Query: 32 KFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGA----KAFVFQSVY--AGKTLRMT 85 K + ++R + T L D + L+ R + +VF+ K +++ Sbjct: 3 KLSDTKIRNAK---TETDTCLSDGN--GLSLRIYPKRGKIARTWVFRYRRPATKKPAKLS 57 Query: 86 IGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWED 145 +G+ + AR +A ++ + G+DP+ + + AE +T +E Sbjct: 58 LGDYPVISLRAARQQAEIMRQQLFEGLDPQYVQKEQRAEN--------ANAITTQQLFES 109 Query: 146 YLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELT 205 +L K+ + + R +ADH E L L + Sbjct: 110 WL------TLQKSAKEVTDRTLADHEARWRVHLEKS--------------LGPLLAKHVI 149 Query: 206 PDYIAAWLSTERQNR-PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPV 264 IAA L + T LL+ +++ + +I + + + + Sbjct: 150 RRQIAAVLDSMVAKGIKEETRKCLCLLKMLFRFAEER----HLIKENPIEGLSAKSFKIT 205 Query: 265 SASKADDCLQKEQLKSWFSAVRSLN-NPIASAYLQVLLLTGARREEIASLRWSDVDFKWS 323 + + D L +L+S++ + S + P + ++L+LTGARR E+ +RWS++D Sbjct: 206 AGAPRDRALPLSELRSFWRLLDSASITPATANAFKLLILTGARRGEVTMMRWSELDLTQG 265 Query: 324 SMRIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIE--PR 378 + K + L L+ + +V + + Sbjct: 266 MWVLPPERTKNRKAHTLYLPNLAMRLIESMR----PISGHGEYVLSLGNGITPLSTEGLT 321 Query: 379 SAHNRALVLAE-LPHISLHGLRRSFGT-LAEWVEVPTGIVAQIMGHKPSALAEKHYRR-R 435 R E +PH ++H LRRS T E ++ ++ +++ H+P Y+R Sbjct: 322 VTLRRLSTRLESVPHFTVHDLRRSAATAWGEHLKTSPHVIEKMLNHQPRDRLVATYQRAA 381 Query: 436 PLDLLRKWHEKIETWILNEAGITIKNNV 463 +D + + + N N V Sbjct: 382 YIDEQKMAWKAWGEMVENHVANDFGNVV 409 >UniRef50_C4LB72 Integrase family protein n=9 Tax=Gammaproteobacteria RepID=C4LB72_TOLAT Length = 433 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 77/448 (17%), Positives = 152/448 (33%), Gaps = 50/448 (11%) Query: 28 LSR-QKFTFERLRRFTLPEGKKQTFLWD-ADVTT---LACRA-TSGAKAFVFQSVYAGKT 81 +++ TF +++ + Q + WD L R TSG K F+++ GKT Sbjct: 1 MAKATGLTFNKIKGLK--PKETQYYEWDVTGKRGQGRLGVRVNTSGEKVFIYRYFVDGKT 58 Query: 82 LRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSV 141 + +G +D+A + R L+ G+DP+ +++ Q ++ K + Sbjct: 59 RFIQLGLFPAMSLDEAGQKTREFAGLLKAGLDPKNEL-ERMSRVREAQEKAEAEKGSIKQ 117 Query: 142 AWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPL 201 E Y+ +++T +T R D + Sbjct: 118 LIETYIWKMKTDGK-RTYADVLRRLEKDVYPVIPPT---------------------KKA 155 Query: 202 SELTPDYIAAWLSTERQNRP-TVTAHAYRLLRAFIKWSNYQKKYQGIIPGDL-----AQD 255 E+T I L+ Q + L A ++ + Sbjct: 156 KEVTSLDIKQILTNMIQRGAIVQSNRVRSYLHAAFQYGLGADLDPANNRESVLFGLTMNP 215 Query: 256 YNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLN--NPIASAYLQVLLLT-GARREEIAS 312 +V + + L E ++ + + + + L+ T G R E+A+ Sbjct: 216 VSVIPRQGYAEKAGQNWLSLECVQKLMAIFEDVPKVGSLPAQLLKFCFYTGGQRPYELAA 275 Query: 313 LRWSDVDFKWSSMRIKD---KIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNS 369 WS VD++ ++ + D K + E +IPLT +L L + + N ++F Sbjct: 276 SEWSSVDWEQRTLLVIDSISKNKREHLIPLTDSALAILKELHEK---NTNGSRYIFPQKD 332 Query: 370 KSGKIIEPRSAHNRALVLAELPHISL---HGLRRSFGTLAEWVEVPTGIVAQIMGHKPSA 426 A P S+ +RR+ TL + + + + H + Sbjct: 333 PEKHFRTDSFAQAIIYFRKSHPDFSVFVARDVRRTCKTLMGELGITKELRDRTQNHAQND 392 Query: 427 LAEKHY-RRRPLDLLRKWHEKIETWILN 453 ++ +HY R L R+ E E + + Sbjct: 393 VSSRHYDRYSYLPEKRRALEAWEARLNS 420 >UniRef50_Q4K6S7 Site-specific recombinase, phage integrase family n=4 Tax=Proteobacteria RepID=Q4K6S7_PSEF5 Length = 413 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 64/433 (14%), Positives = 127/433 (29%), Gaps = 47/433 (10%) Query: 29 SRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQS-VYAGKTLRMTI 86 R+ L K+ D + L R G K++ + AG M + Sbjct: 7 KRRPLADTTLTGLE--PEAKEYRELDGN--GLYFRVKPDGGKSWQLRYKRPAGNWAWMGL 62 Query: 87 GNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDY 146 G + AR +A L+ I +GIDP K A ++ + TF A + + Sbjct: 63 GGYPEVSGALAREKAAELRKTISSGIDPLEQKRSAKAAIDAAKTR------TFRAAADAW 116 Query: 147 LQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTP 206 L+ A + Y+ L +L + PL E+T Sbjct: 117 LKAKEEKGLAPSTLNKIRTYLDK---------------------DILPALGDKPLDEITR 155 Query: 207 DYIAAWLSTERQN-RPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVS 265 A ++ V + + + D Sbjct: 156 TDCAELQASIEARDAHNVAEKCRTWINQIFGRAIGLGLTEN----DPGSRLRDIAAQAPK 211 Query: 266 ASKADDCLQKEQLKSWFSAVRSLNNP-IASAYLQVLLLTGARREEIASLRWSDVDFKWSS 324 + L+ +L + +A+++ + A + + T +R + W + D ++ Sbjct: 212 TQQHPHLLEP-ELGEFLTALKNTPSRLTARTAAWLCIWTASRPGMVRLAEWKEFDLDKAT 270 Query: 325 MRIK---DKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAH 381 K+ + + PL L L + + W+F I + + Sbjct: 271 WTTPAAKMKMRRDFVCPLPHQAIAALKEL----HCLTGRSRWLFPGVGAKNPTISENTIN 326 Query: 382 NRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLR 441 + + HG R + TL P V + HK ++ + + + L+ Sbjct: 327 KVFATIGYKGRLVGHGTRHTASTLLREHGWPKEHVEAQLAHKEEGISGVYNKAQYLEQRI 386 Query: 442 KWHEKIETWILNE 454 + + Sbjct: 387 TMMQWYADHLDAL 399 >UniRef50_A1ANR7 Phage integrase family protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ANR7_PELPD Length = 453 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 71/488 (14%), Positives = 148/488 (30%), Gaps = 97/488 (19%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAGKTLRMTIGNI 89 KFT +R +K + + D R SG + FVF AGK +M +G+ Sbjct: 1 MKFTDTGIRNLK--PKEKMYQVREGD--GFGVRVLPSGLRIFVFIYTIAGKRRQMNLGDY 56 Query: 90 NDWKIDDARAEARRLQTLI-DTGIDPRIA------KAVKIAEAESLQAESRKTKVTFSVA 142 + +AR A + ++ DP+ + + + + T Sbjct: 57 PAVSLSEARERAADARKVLSRERTDPQEHGFSWHYSPERERREMAAKEKEELENPTVKQL 116 Query: 143 WEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLS 202 Y++ + + L + Sbjct: 117 ITRYIERYAMKNKKSWQED-----------------------KRILEKDVLPLWGDRKAK 153 Query: 203 ELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMV 262 ++ + L + + + ++++R ++ Q+ +IP + + Sbjct: 154 DVIRRDVIQLLDGMQGRGDGIITNTFKIIRRMFRYGVKQE----LIPTTPCYGFEKGDEL 209 Query: 263 PVSASKADDCLQKEQLKSWFSAVRSLN-NPIASAYLQVLLLTGARREEIASLRWSDVDFK 321 P + SK + L + ++K+++ + + L++ LLTG R E+AS+ S++ + Sbjct: 210 PTTKSK-ERTLTETEIKAFWGGIDRCMISEDVRRILKLTLLTGQRPGEVASMHSSEISGR 268 Query: 322 WSSMRIKDKI-----EGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNS------- 369 W K+ ++ I LT L+ KEG++F S Sbjct: 269 WWEFSPKETKITKEVPRKQRIYLTDMTLSLIRE----------KEGYIFPSPKIRTNVNE 318 Query: 370 -KSGKIIEPRSAHNRAL---------------------------------VLAELPHISL 395 I R+ ++ Sbjct: 319 QPIDTPITERAVAYALRRNLLTHTVKPKPATWKKSSHQSKDKKKFIIPDDKKLDIEKFCP 378 Query: 396 HGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWILNEA 455 H LRR+ T+ + IV ++ H + + + + +K E E + + Sbjct: 379 HDLRRTCATILSEIGFSDEIVDAVLAHLKKGEIKTYNKNKYDKERQKALEAWERKLKSII 438 Query: 456 GITIKNNV 463 N V Sbjct: 439 TGQKDNVV 446 >UniRef50_D0SZI9 Integrase n=14 Tax=cellular organisms RepID=D0SZI9_ACILW Length = 401 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 65/445 (14%), Positives = 133/445 (29%), Gaps = 68/445 (15%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRA-TSGAKAFVFQSVYAG--KTLRMTIG 87 T ++R+ +K FL D D L+ + +G K++ ++ AG K RM +G Sbjct: 1 MSLTEIKVRQAK--SKEKIYFLADDD--GLSLKVEPNGRKSWSYRYSLAGTNKRPRMKLG 56 Query: 88 NINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYL 147 + +AR+ + P K +K TF E++L Sbjct: 57 EYPVMSLKEARSVRDEYKFNNYENK-PLHKKYIK----------------TFQDICEEWL 99 Query: 148 QELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPD 207 + + + ++ +P E+ Sbjct: 100 EFKIKNSFED-----------------EPRCGVIQLAKKCLDQDVYPNIGLMPFIEIKRY 142 Query: 208 YIAAWLSTERQNR-PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSA 266 + + AY L ++ + I L + K+ Sbjct: 143 DLVKIIKKIESRNVKEPVKKAYSYLNQIYDYAVAMGYCEYNIAHGLHKILVNNKIKKNYP 202 Query: 267 SKADDCLQKEQLKSWFSAVRSLN-NPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSM 325 L ++L ++ + + +N +PI L L TG R E+ D Sbjct: 203 H-----LNSDELSNFLAKLNQINTDPIIKKALLFKLYTGVRGGELLLCEPHHFDLDKKIW 257 Query: 326 RIKD---KIEGERI----------IPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSG 372 +I K ++ +PL+ E++ + E +VF S + Sbjct: 258 KIPALHIKQYRRKVILGHDIPDFFVPLSDQALEVVKSALVWSH----GEKYVFSSPRNNN 313 Query: 373 KIIEPRSAHNRALVLAELPH-ISLHGLRRSFGTLAEWVE-VPTGIVAQIMGHKPSALAEK 430 K I + + + + ++ HGLR +F T+ + + + H Sbjct: 314 KPIHFNTLNLIIRKMGYTKNELTSHGLRSTFSTILNESGLFQSNWIEAQLSHTDKNKTRA 373 Query: 431 HYRRR-PLDLLRKWHEKIETWILNE 454 Y + + + +I + Sbjct: 374 SYNHAEYFNQRMEMMQWWGDFIDSC 398 >UniRef50_Q4QNN7 Prophage CP4-57-like integrase n=4 Tax=Haemophilus influenzae RepID=Q4QNN7_HAEI8 Length = 403 Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 70/440 (15%), Positives = 158/440 (35%), Gaps = 53/440 (12%) Query: 26 MALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSV--YAGKTL 82 MA + +++ K L D L + G+K++ F K Sbjct: 1 MAKKVKPLVDTEIKKAKAS--NKPYTLTDGY--GLFLIISPTGSKSWRFNYYRPITKKRA 56 Query: 83 RMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVA 142 ++++G + AR + + L+ IDP+ + ++ TF Sbjct: 57 KISLGLYPAITLSKARELREQYRQLLANKIDPQEYIKQHEL------LQLQRQNNTFFAI 110 Query: 143 WEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLS 202 + Q+ + I + T + R + + L + P++ Sbjct: 111 STQWKQKKVSEIKSVTLKSRW-RTLEKY---------------------AFPYLGDNPIA 148 Query: 203 ELTPDYIAAWLSTERQNRPT-VTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKM 261 E+TP + + + + L+ + ++ + + ++++ +NV Sbjct: 149 EITPQQLHDTVIPLFERGVSHTGKLVIALVNEIMNFAVNKGIIEFNKCINVSKAFNV--- 205 Query: 262 VPVSASKADDCLQKEQLKSWFSAVR-SLNNPIASAYLQVLLLTGARREEIASLRWSDVDF 320 + + ++ E+L + SA+R S + + ++ LLT R E A+ +W+++DF Sbjct: 206 ---NRTTHHPTIRPEKLPEFMSALRHSHIDLMVKYLIEFSLLTITRPSEAANAQWNEIDF 262 Query: 321 K---WSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEP 377 + W+ + K++ IPL+ V ++LN L + ++F+S + + Sbjct: 263 EKSLWNIPAERMKMKKAFTIPLSLQVLKILNKLKNI----SGRSRFIFQSQRYPERPLHS 318 Query: 378 RSAHNRALVLAELPHISLHGLRRSFGTLAEW--VEVPTGIVAQIMGHKPSALAEKHYRRR 435 SA+ + ++ HGLR T E+ I+ + H+ Y R Sbjct: 319 SSANAAIKRVGYKDQLTSHGLRSIASTYLSETFTEMNLEILEACLSHQSKNQVRNAYNRS 378 Query: 436 -PLDLLRKWHEKIETWILNE 454 L+ + ++ Sbjct: 379 TYLEQRKPLMNAWGDFVEEC 398 >UniRef50_A5EQ25 P4-like integrase n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EQ25_BRASB Length = 407 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 62/436 (14%), Positives = 127/436 (29%), Gaps = 53/436 (12%) Query: 31 QKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATS-GAKAFVFQSVYAGKTLRMTIGNI 89 T + R ++ +D L T GAK + + GK + +G Sbjct: 1 MPLTDTKCRNAKGQIKSRKL----SDGGGLHLLITPDGAKYWRLAYRWHGKQRTLALGVY 56 Query: 90 NDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQE 149 + +ARA + I IDP I K + +A T TF ++ + Sbjct: 57 PAVGLIEARASRDDAKRSIAADIDPSIVKRERK------RAAKIATGNTFEAVAREWHEN 110 Query: 150 LRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYI 209 + S R AD ++ ++ L P + Sbjct: 111 WKDARSPYYAAQILRRLEAD----------------------AFPAIGRRSIAALEPPEL 148 Query: 210 AAWLSTERQNR-PTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASK 268 L + +L+ +++ + + DL + Sbjct: 149 LDMLRKVEKRGVNETARRLKQLVGQIFRFAIVTGRAKRDPSVDLKDALRATG-----EPQ 203 Query: 269 ADDCLQKEQLKSWFSAVRSLNN-PIASAYLQVLLLTGARREEIASLRWSDV-DFK----- 321 + +L ++ + S + L+++ LT R E+ + +W+++ + Sbjct: 204 RHRAMPLSELPTFLQKLESYSGEQQTKLALKLVTLTFLRTTELRAGKWNELENLDENSAL 263 Query: 322 WSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAH 381 W + K+ E ++PL+ L L +F S K G + + Sbjct: 264 WRIPAERMKMRLEHLVPLSRQAVAALRELRTL----SGGSPNIFPSPGK-GDCMSSNTML 318 Query: 382 NRALVLAELPHISLHGLRRSFGTLAEWVE-VPTGIVAQIMGHKPSALAEKHY-RRRPLDL 439 + + HG R T+ + + + H + Y + Sbjct: 319 YALYRMGYHGRATTHGFRAVASTILNETNLFNRDWIERQLSHVERNEVRRAYNAAEWMPD 378 Query: 440 LRKWHEKIETWILNEA 455 R+ + I A Sbjct: 379 RRRMMQWWADHITALA 394 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.312 0.152 0.433 Lambda K H 0.267 0.0468 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,670,107,411 Number of Sequences: 3077464 Number of extensions: 119313621 Number of successful extensions: 450920 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 7483 Number of HSP's successfully gapped in prelim test: 4416 Number of HSP's that attempted gapping in prelim test: 417881 Number of HSP's gapped (non-prelim): 14071 length of query: 466 length of database: 1,040,396,356 effective HSP length: 132 effective length of query: 334 effective length of database: 634,171,108 effective search space: 211813150072 effective search space used: 211813150072 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 95 (41.0 bits)