BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (508 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P77698 Uncharacterized protein ybcK n=22 Tax=Escherichi... 1046 0.0 UniRef50_C6URU6 Putative uncharacterized protein n=2 Tax=Enterob... 743 0.0 UniRef50_B3WZ52 Hypothetical bacteriophage protein n=1 Tax=Shige... 317 9e-85 UniRef50_Q0T5X8 Hypothetical bacteriophage protein n=5 Tax=Enter... 271 6e-71 UniRef50_B3X0B7 Recombinase n=1 Tax=Shigella dysenteriae 1012 Re... 214 6e-54 UniRef50_C7HJH4 Resolvase domain protein n=1 Tax=Clostridium the... 210 1e-52 UniRef50_B8DJ05 Recombinase n=1 Tax=Desulfovibrio vulgaris str. ... 202 2e-50 UniRef50_A6T2W2 Site-specific recombinase n=1 Tax=Janthinobacter... 196 2e-48 UniRef50_Q30XM6 Putative uncharacterized protein n=1 Tax=Desulfo... 194 7e-48 UniRef50_D0XHM7 Putative uncharacterized protein n=1 Tax=Vibrio ... 191 5e-47 UniRef50_B3G100 Recombinase/resolvase n=1 Tax=Pseudomonas aerugi... 185 4e-45 UniRef50_Q87J19 Putative site-specific recombinase n=1 Tax=Vibri... 183 2e-44 UniRef50_Q1V893 Putative uncharacterized protein n=1 Tax=Vibrio ... 182 2e-44 UniRef50_B5EDN9 Recombinase n=1 Tax=Geobacter bemidjiensis Bem R... 182 3e-44 UniRef50_B9M0D0 Recombinase n=1 Tax=Geobacter sp. FRC-32 RepID=B... 182 4e-44 UniRef50_Q1QRV3 Recombinase n=1 Tax=Nitrobacter hamburgensis X14... 181 5e-44 UniRef50_Q39QW8 Resolvase-like:Recombinase n=1 Tax=Geobacter met... 180 1e-43 UniRef50_Q2YCV5 Recombinase n=1 Tax=Nitrosospira multiformis ATC... 179 2e-43 UniRef50_B9M114 Recombinase n=1 Tax=Geobacter sp. FRC-32 RepID=B... 178 4e-43 UniRef50_Q1Z7J0 Site-specific recombinase n=1 Tax=Photobacterium... 176 1e-42 UniRef50_Q3J212 Putative site-specific recombinase n=1 Tax=Rhodo... 174 6e-42 UniRef50_UPI0001BC6B74 site-specific recombinase n=1 Tax=Vibrio ... 174 9e-42 UniRef50_B5XQB9 Site-specific recombinase, resolvase family n=6 ... 174 9e-42 UniRef50_Q98DK0 Site-specific recombinase n=1 Tax=Mesorhizobium ... 174 9e-42 UniRef50_Q88NT6 Recombinase-related protein n=1 Tax=Pseudomonas ... 174 9e-42 UniRef50_C9QK00 Site-specific recombinase n=1 Tax=Vibrio orienta... 173 1e-41 UniRef50_A9W3Z8 Recombinase n=1 Tax=Methylobacterium extorquens ... 171 6e-41 UniRef50_A5L3F9 Putative uncharacterized protein n=1 Tax=Vibrion... 169 2e-40 UniRef50_Q2BR60 Putative uncharacterized protein n=1 Tax=Neptuni... 166 1e-39 UniRef50_Q0F1R0 Recombinase n=2 Tax=Mariprofundus ferrooxydans P... 166 3e-39 UniRef50_A6D403 Resolvase-like:Recombinase protein n=1 Tax=Vibri... 165 3e-39 UniRef50_Q46W15 Recombinase n=1 Tax=Ralstonia eutropha JMP134 Re... 164 8e-39 UniRef50_Q0G2L1 Putative uncharacterized protein n=1 Tax=Fulvima... 162 2e-38 UniRef50_Q2BRM1 Site-specific recombinase n=1 Tax=Neptuniibacter... 159 2e-37 UniRef50_B0T614 Recombinase n=1 Tax=Caulobacter sp. K31 RepID=B0... 159 2e-37 UniRef50_A3SXC7 Hypothetical bacteriophage protein n=1 Tax=Sulfi... 152 2e-35 UniRef50_Q3KAI6 Putative integrase/recombinase n=1 Tax=Pseudomon... 152 2e-35 UniRef50_B9XI16 Resolvase domain protein n=1 Tax=bacterium Ellin... 152 3e-35 UniRef50_A8GC08 Resolvase domain n=1 Tax=Serratia proteamaculans... 150 9e-35 UniRef50_A9APW9 Recombinase n=16 Tax=root RepID=A9APW9_BURM1 145 4e-33 UniRef50_C5TBX4 Resolvase domain protein (Fragment) n=1 Tax=Acid... 145 4e-33 UniRef50_A6D144 Possible recombinase n=1 Tax=Vibrio shilonii AK1... 144 1e-32 UniRef50_Q3Z3B5 Putative uncharacterized protein n=1 Tax=Shigell... 141 7e-32 UniRef50_C7CL55 Putative recombinase n=1 Tax=Methylobacterium ex... 134 1e-29 UniRef50_A7MFZ6 Putative uncharacterized protein n=1 Tax=Cronoba... 131 7e-29 UniRef50_C1D595 Recombinase n=1 Tax=Laribacter hongkongensis HLH... 130 2e-28 UniRef50_Q02Q54 Possible recombinase n=1 Tax=Pseudomonas aerugin... 129 3e-28 UniRef50_UPI0001A445A7 hypothetical protein PcarcW_00494 n=1 Tax... 127 1e-27 UniRef50_B5S6I4 Putative site-specific recombinase (Partial sequ... 121 7e-26 UniRef50_Q883N3 Conserved domain protein n=1 Tax=Pseudomonas syr... 120 8e-26 UniRef50_Q489L6 Putative site-specific recombinase n=1 Tax=Colwe... 118 6e-25 UniRef50_A6D1G1 Recombinase n=2 Tax=Vibrio RepID=A6D1G1_9VIBR 114 9e-24 UniRef50_UPI0001BC7310 putative site-specific recombinase n=1 Ta... 110 1e-22 UniRef50_Q07ZW2 Recombinase n=1 Tax=Shewanella frigidimarina NCI... 108 4e-22 UniRef50_UPI0001905A69 hypothetical protein RetlB5_21195 n=1 Tax... 108 4e-22 UniRef50_A6D0Z7 Putative uncharacterized protein n=1 Tax=Vibrio ... 107 7e-22 UniRef50_UPI00016C36BA Recombinase n=1 Tax=Gemmata obscuriglobus... 107 9e-22 UniRef50_C9QGK9 Recombinase n=1 Tax=Vibrio orientalis CIP 102891... 104 8e-21 UniRef50_B5WBE5 Resolvase domain n=1 Tax=Burkholderia sp. H160 R... 104 9e-21 UniRef50_UPI00016C51D7 putative integrase/recombinase n=1 Tax=Ge... 103 1e-20 UniRef50_C9Q5S8 Putative uncharacterized protein n=1 Tax=Vibrio ... 99 3e-19 UniRef50_UPI00016C4027 recombinase-related protein n=1 Tax=Gemma... 99 5e-19 UniRef50_B1J377 Resolvase domain n=1 Tax=Pseudomonas putida W619... 97 1e-18 UniRef50_Q7U778 Possible site-specific recombinase n=1 Tax=Synec... 94 1e-17 UniRef50_A6FFB9 Putative uncharacterized protein n=1 Tax=Moritel... 94 1e-17 UniRef50_Q7U6I7 Partial homology to phage recombinase n=1 Tax=Sy... 91 8e-17 UniRef50_B5QBH4 Resolvase domain protein n=1 Tax=Salmonella ente... 87 2e-15 UniRef50_A9MR78 Putative uncharacterized protein n=2 Tax=Gammapr... 86 2e-15 UniRef50_B5IL90 Putative phage recombinase n=1 Tax=Cyanobium sp.... 86 4e-15 UniRef50_Q1VBK2 Resolvase-like:Recombinase protein n=1 Tax=Vibri... 85 5e-15 UniRef50_A6LK15 Resolvase, N-terminal domain n=1 Tax=Thermosipho... 77 2e-12 UniRef50_D1AQX9 Recombinase n=1 Tax=Sebaldella termitidis ATCC 3... 75 5e-12 UniRef50_C4F8C7 Putative uncharacterized protein n=1 Tax=Collins... 75 6e-12 UniRef50_A7VUQ9 Putative uncharacterized protein n=2 Tax=Clostri... 74 1e-11 UniRef50_C0FPH3 Putative uncharacterized protein n=2 Tax=Clostri... 74 1e-11 UniRef50_B5IKH1 Recombinase, putative n=1 Tax=Cyanobium sp. PCC ... 72 5e-11 UniRef50_C4ZFI3 Site-specific recombinase n=3 Tax=Clostridiales ... 70 1e-10 UniRef50_C1XY58 Site-specific recombinase, DNA invertase Pin n=2... 70 2e-10 UniRef50_C5VNM7 Site-specific recombinase, resolvase family n=1 ... 69 4e-10 UniRef50_UPI0001BC4A50 recombinase n=2 Tax=Fusobacterium RepID=U... 69 4e-10 UniRef50_B2V2D8 Putative resolvase n=2 Tax=Clostridium RepID=B2V... 69 5e-10 UniRef50_C6JB72 Resolvase domain-containing protein n=1 Tax=Rumi... 68 7e-10 UniRef50_Q5WE11 Site-specific recombinase for integration and ex... 68 8e-10 UniRef50_B0P5W1 Putative uncharacterized protein n=1 Tax=Anaerot... 68 9e-10 UniRef50_C1I4H9 DNA integration/recombination protein n=4 Tax=Cl... 66 3e-09 UniRef50_C2FUQ8 Site-specific recombinase (Fragment) n=2 Tax=Sph... 66 3e-09 UniRef50_B0K4R6 Recombinase n=9 Tax=Clostridia RepID=B0K4R6_THEPX 66 4e-09 UniRef50_UPI00016C576E recombinase-related protein n=1 Tax=Gemma... 65 4e-09 UniRef50_C6JGM7 Putative uncharacterized protein n=1 Tax=Ruminoc... 65 8e-09 UniRef50_Q1J4R9 Site-specific recombinase n=10 Tax=Bacteria RepI... 64 1e-08 UniRef50_UPI00019734DD site-specific recombinase n=1 Tax=Clostri... 63 3e-08 UniRef50_Q187J5 Site-specific recombinase n=2 Tax=Clostridium di... 62 4e-08 UniRef50_D1NLU0 Resolvase domain protein n=3 Tax=Clostridiales R... 62 5e-08 UniRef50_A7AYT5 Putative uncharacterized protein n=4 Tax=Bacteri... 61 9e-08 UniRef50_A8MGG9 Recombinase n=21 Tax=Firmicutes RepID=A8MGG9_ALKOO 61 1e-07 UniRef50_C5UY92 Resolvase n=1 Tax=Clostridium botulinum E1 str. ... 61 1e-07 UniRef50_C2F160 Recombinase n=2 Tax=Lactobacillus reuteri RepID=... 61 1e-07 UniRef50_D2XR37 Site-specific recombinase n=1 Tax=Bacillus phage... 61 1e-07 UniRef50_C0ZHM9 Putative DNA recombinase n=1 Tax=Brevibacillus b... 60 1e-07 UniRef50_UPI0001694CB1 DNA recombinase, putative n=2 Tax=Paeniba... 60 1e-07 UniRef50_Q72WY0 DNA recombinase, putative n=7 Tax=Bacillus cereu... 60 2e-07 UniRef50_A5Z6W6 Putative uncharacterized protein n=2 Tax=Clostri... 60 2e-07 UniRef50_B7JP85 Site-specific recombinase n=9 Tax=Bacillaceae Re... 60 2e-07 UniRef50_C8W0X4 Resolvase domain protein n=1 Tax=Desulfotomaculu... 60 3e-07 UniRef50_A5ZPV0 Putative uncharacterized protein n=1 Tax=Ruminoc... 59 4e-07 UniRef50_Q73I88 Prophage LambdaW1, site-specific recombinase, re... 59 4e-07 UniRef50_Q3Z6A0 Resolvase domain protein n=6 Tax=Dehalococcoides... 59 6e-07 UniRef50_A5FPJ2 Resolvase, N-terminal domain n=8 Tax=root RepID=... 58 9e-07 UniRef50_A7VWP7 Putative uncharacterized protein n=1 Tax=Clostri... 58 9e-07 UniRef50_Q3DFF9 Site-specific recombinase, resolvase family, put... 58 1e-06 UniRef50_C3NXE9 Putative uncharacterized protein n=5 Tax=Vibrio ... 57 1e-06 UniRef50_B0MRU4 Putative uncharacterized protein n=1 Tax=Eubacte... 57 1e-06 UniRef50_C5RQ70 Resolvase domain protein n=4 Tax=Firmicutes RepI... 57 2e-06 UniRef50_C1FRE4 Resolvase n=3 Tax=Clostridium botulinum RepID=C1... 57 2e-06 UniRef50_B7JIH4 Resolvase domain protein n=4 Tax=Bacillus cereus... 57 2e-06 UniRef50_B3CD10 Putative uncharacterized protein n=1 Tax=Bactero... 57 2e-06 UniRef50_B3E518 Resolvase domain n=1 Tax=Geobacter lovleyi SZ Re... 56 2e-06 UniRef50_B0MRT0 Putative uncharacterized protein n=1 Tax=Eubacte... 56 3e-06 UniRef50_A5FQB3 Resolvase, N-terminal domain n=6 Tax=Dehalococco... 56 4e-06 UniRef50_C0M6W3 Putative phage integrase n=1 Tax=Streptococcus e... 55 5e-06 UniRef50_D1N7I8 Resolvase domain protein n=1 Tax=Victivallis vad... 55 6e-06 UniRef50_C9LP68 DNA integration/recombination protein n=1 Tax=Di... 55 8e-06 UniRef50_A7VSK4 Putative uncharacterized protein n=1 Tax=Clostri... 55 8e-06 UniRef50_C5ENX2 Putative uncharacterized protein n=1 Tax=Clostri... 55 8e-06 UniRef50_UPI0001BCECED site-specific recombinase n=1 Tax=Selenom... 54 1e-05 UniRef50_B1HUC4 Cassette chromosome recombinase B n=2 Tax=Firmic... 54 1e-05 UniRef50_UPI0001C37799 recombinase n=1 Tax=Ruminococcus flavefac... 54 1e-05 UniRef50_C8VVS5 Resolvase domain protein n=19 Tax=Firmicutes Rep... 54 1e-05 UniRef50_UPI0001973930 site-specific recombinase n=1 Tax=Clostri... 54 1e-05 UniRef50_Q65CS9 Site-specific DNA recombinase n=1 Tax=Bacillus l... 54 2e-05 UniRef50_A5FSM5 Resolvase, N-terminal domain n=2 Tax=Dehalococco... 54 2e-05 UniRef50_C5UX89 Site-specific recombinase, resolvase family, put... 53 3e-05 UniRef50_C5V7P9 Recombinase (Fragment) n=3 Tax=Gallionella ferru... 53 3e-05 UniRef50_B1IBJ7 Low similarity to site-specific recombinase n=34... 52 4e-05 UniRef50_A6LTU9 Resolvase, N-terminal domain n=1 Tax=Clostridium... 52 5e-05 UniRef50_C6QV50 Resolvase domain protein n=1 Tax=Geobacillus sp.... 52 5e-05 UniRef50_A5TXM5 Possible recombinase n=3 Tax=Fusobacterium RepID... 52 6e-05 UniRef50_A6LN32 Resolvase, N-terminal domain n=1 Tax=Thermosipho... 52 6e-05 UniRef50_A9KQ42 Resolvase domain n=1 Tax=Clostridium phytofermen... 52 7e-05 UniRef50_D1C6M6 Resolvase domain protein n=1 Tax=Sphaerobacter t... 52 8e-05 UniRef50_B3Z2D3 Cassette chromosome recombinase B n=2 Tax=Bacill... 51 1e-04 UniRef50_A7HP92 Resolvase domain n=1 Tax=Parvibaculum lavamentiv... 51 1e-04 UniRef50_A9NFR7 Serine recombinase n=1 Tax=Acholeplasma laidlawi... 50 2e-04 UniRef50_UPI00017F31ED hypothetical protein EscherichcoliO157_20... 50 2e-04 UniRef50_C7HAC5 DNA integration/recombination protein n=4 Tax=Fa... 50 2e-04 UniRef50_A8SCA0 Putative uncharacterized protein n=1 Tax=Faecali... 50 2e-04 UniRef50_C7WYU0 Site-specific recombinase n=2 Tax=Enterococcus f... 50 2e-04 UniRef50_C0E5J2 Putative uncharacterized protein n=1 Tax=Coryneb... 50 2e-04 UniRef50_B8FB35 Resolvase domain protein n=1 Tax=Desulfatibacill... 50 2e-04 UniRef50_C6QTF5 Recombinase n=1 Tax=Geobacillus sp. Y4.1MC1 RepI... 50 2e-04 UniRef50_A3VUU7 Putative uncharacterized protein n=1 Tax=Parvula... 50 2e-04 UniRef50_A5KP69 Putative uncharacterized protein n=2 Tax=Clostri... 50 3e-04 UniRef50_Q97JP5 Site-specific DNA recombinase n=1 Tax=Clostridiu... 49 3e-04 UniRef50_A8RK24 Putative uncharacterized protein n=3 Tax=Clostri... 49 4e-04 UniRef50_A5N4T4 Putative uncharacterized protein n=7 Tax=Bacteri... 49 4e-04 UniRef50_C7IHA5 Resolvase domain protein n=1 Tax=Clostridium pap... 49 4e-04 UniRef50_B5S6I3 Hypothetical site-specific recombinase (Partial ... 49 4e-04 UniRef50_UPI0001C355EF site-specific recombinase n=1 Tax=Clostri... 49 5e-04 UniRef50_C7HT51 TnpX site-specific recombinase n=2 Tax=Clostridi... 49 6e-04 UniRef50_B8FU52 Resolvase domain protein n=2 Tax=Clostridiales R... 48 8e-04 UniRef50_A0LPU3 Recombinase n=6 Tax=Deltaproteobacteria RepID=A0... 48 0.001 UniRef50_C7GH36 Site-specific recombinase, resolvase family n=1 ... 48 0.001 UniRef50_C0W970 Site-specific recombinase n=1 Tax=Acidaminococcu... 48 0.001 UniRef50_A5VBR4 Resolvase, N-terminal domain n=12 Tax=Alphaprote... 48 0.001 UniRef50_D2BJ82 SsrA integrase n=2 Tax=Dehalococcoides RepID=D2B... 47 0.001 UniRef50_Q3K263 Prophage LambdaSa04, site-specific recombinase, ... 47 0.001 UniRef50_Q5XBF4 Site-specific recombinase n=9 Tax=Bacteria RepID... 47 0.001 UniRef50_A3DG42 Recombinase n=7 Tax=root RepID=A3DG42_CLOTH 47 0.001 UniRef50_A5ZMY9 Putative uncharacterized protein n=2 Tax=Clostri... 47 0.001 UniRef50_A7AY22 Putative uncharacterized protein n=1 Tax=Ruminoc... 47 0.002 UniRef50_B1R8L3 Resolvase, N domain family n=1 Tax=Clostridium p... 47 0.002 UniRef50_C0ESV4 Putative uncharacterized protein n=1 Tax=Eubacte... 47 0.002 UniRef50_B1QS28 Site-specific recombinase n=2 Tax=Clostridium bu... 47 0.002 UniRef50_D1AH67 Recombinase n=1 Tax=Sebaldella termitidis ATCC 3... 47 0.002 UniRef50_Q67SM2 Site-specific recombinase n=1 Tax=Symbiobacteriu... 47 0.002 UniRef50_A3DG43 Recombinase n=6 Tax=root RepID=A3DG43_CLOTH 47 0.002 UniRef50_C6CZ76 Resolvase domain protein n=1 Tax=Paenibacillus s... 47 0.002 UniRef50_C2BG59 Phage site-specific recombinase n=1 Tax=Anaeroco... 47 0.002 UniRef50_C6GWI0 Site-specific recombinase n=1 Tax=Streptococcus ... 47 0.002 UniRef50_A7B0Q2 Putative uncharacterized protein n=4 Tax=Clostri... 46 0.003 UniRef50_A5ZV57 Putative uncharacterized protein n=4 Tax=Clostri... 46 0.003 UniRef50_D2R2S5 Resolvase domain protein n=1 Tax=Pirellula stale... 46 0.004 UniRef50_Q0AWY2 Site-specific recombinase, putative n=7 Tax=Clos... 46 0.004 UniRef50_UPI0000F53A4D Resolvase domain protein n=1 Tax=Listeria... 46 0.004 UniRef50_B2IQ45 Site-specific recombinase, resolvase family n=19... 46 0.004 UniRef50_A8SDY9 Putative uncharacterized protein n=2 Tax=Faecali... 45 0.005 UniRef50_C8VVS3 Resolvase domain protein n=1 Tax=Desulfotomaculu... 45 0.005 UniRef50_A5N185 Recombinase-related protein n=6 Tax=Bacteria Rep... 45 0.005 UniRef50_C4XT98 Putative uncharacterized protein n=2 Tax=Desulfo... 45 0.005 UniRef50_C3WED2 Resolvase domain-containing protein n=1 Tax=Fuso... 45 0.005 UniRef50_C4ILC3 Resolvase n=1 Tax=Clostridium butyricum E4 str. ... 45 0.006 UniRef50_D0AKJ5 Resolvase n=9 Tax=Bacilli RepID=D0AKJ5_ENTFC 45 0.006 UniRef50_A5VJN5 Recombinase n=6 Tax=Lactobacillus reuteri RepID=... 45 0.006 UniRef50_C8W5L9 Recombinase n=2 Tax=Clostridiales RepID=C8W5L9_D... 45 0.007 UniRef50_A5Z6W7 Putative uncharacterized protein n=2 Tax=Clostri... 45 0.009 UniRef50_B8I5Z6 Resolvase domain protein n=3 Tax=Clostridium Rep... 44 0.010 UniRef50_A0PZI7 Site-specific recombinases, DNA invertase Pin-li... 44 0.010 UniRef50_UPI0001C355F0 cassette chromosome recombinase B n=1 Tax... 44 0.011 UniRef50_A6P2A2 Putative uncharacterized protein n=1 Tax=Bactero... 44 0.011 UniRef50_C0ECX6 Putative uncharacterized protein n=1 Tax=Clostri... 44 0.012 UniRef50_Q1B4B3 Recombinase n=8 Tax=Mycobacterium RepID=Q1B4B3_M... 44 0.012 UniRef50_Q8LTD8 U153 integrase n=13 Tax=root RepID=Q8LTD8_9VIRU 44 0.014 UniRef50_UPI0001C354FA phage site-specific recombinase n=1 Tax=C... 44 0.015 UniRef50_C0EZ44 Putative uncharacterized protein n=1 Tax=Eubacte... 44 0.015 UniRef50_A5KS58 Recombinase n=2 Tax=candidate division TM7 genom... 44 0.016 UniRef50_C3Q415 Site-specific recombinase n=4 Tax=Bacteroides Re... 44 0.016 UniRef50_C6JGM9 Putative uncharacterized protein n=1 Tax=Ruminoc... 44 0.017 UniRef50_A7GPE0 Resolvase domain n=4 Tax=Bacillus cereus group R... 44 0.017 UniRef50_B8J6W1 Resolvase domain protein n=2 Tax=Anaeromyxobacte... 44 0.017 UniRef50_A7HAK1 Recombinase n=1 Tax=Anaeromyxobacter sp. Fw109-5... 44 0.017 UniRef50_A7GVM1 Resolvase domain n=1 Tax=Bacillus cytotoxicus NV... 44 0.020 UniRef50_C2KNU8 Site-specific recombinase n=2 Tax=Actinomycetale... 44 0.020 UniRef50_B6FLM9 Putative uncharacterized protein n=1 Tax=Clostri... 44 0.021 UniRef50_C6LJI9 Site-specific recombinase, resolvase family n=1 ... 44 0.021 UniRef50_Q3SMV6 Resolvase n=4 Tax=Rhizobiales RepID=Q3SMV6_NITWN 43 0.022 UniRef50_A3J612 Site-specific recombinase n=2 Tax=Flavobacteria ... 43 0.027 UniRef50_B7IUF9 Recombinase n=9 Tax=Bacillus cereus group RepID=... 43 0.028 UniRef50_A1VBU1 Resolvase, N-terminal domain n=1 Tax=Desulfovibr... 43 0.029 UniRef50_B0N9Y5 Putative uncharacterized protein n=1 Tax=Clostri... 43 0.030 UniRef50_C6GWI2 Site-specific recombinase n=1 Tax=Streptococcus ... 43 0.031 UniRef50_A6NXM2 Putative uncharacterized protein n=4 Tax=Bacteri... 42 0.041 UniRef50_A3XTC0 Recombinase-related protein n=1 Tax=Vibrio sp. M... 42 0.044 UniRef50_C8XI68 Resolvase domain protein n=1 Tax=Nakamurella mul... 42 0.050 UniRef50_C7GGZ9 Site-specific recombinase, resolvase family n=4 ... 42 0.054 UniRef50_O05415 TnpX n=7 Tax=Firmicutes RepID=O05415_CLOPE 42 0.062 UniRef50_C0WGL8 Site-specific recombinase n=1 Tax=Corynebacteriu... 42 0.065 UniRef50_Q2JEJ8 Recombinase n=1 Tax=Frankia sp. CcI3 RepID=Q2JEJ... 42 0.075 UniRef50_B0P747 Putative uncharacterized protein n=2 Tax=Bacteri... 41 0.085 UniRef50_C6P9P0 Recombinase n=1 Tax=Thermoanaerobacterium thermo... 41 0.094 UniRef50_C6JA41 Putative uncharacterized protein n=1 Tax=Ruminoc... 41 0.095 >UniRef50_P77698 Uncharacterized protein ybcK n=22 Tax=Escherichia coli RepID=YBCK_ECOLI Length = 508 Score = 1046 bits (2704), Expect = 0.0, Method: Compositional matrix adjust. Identities = 508/508 (100%), Positives = 508/508 (100%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS Sbjct: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY Sbjct: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL Sbjct: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL Sbjct: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 Query: 241 LANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLI 300 LANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLI Sbjct: 241 LANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLI 300 Query: 301 NLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINELLFN 360 NLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINELLFN Sbjct: 301 NLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINELLFN 360 Query: 361 CSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTAIAEKIRLLDKELRRASV 420 CSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTAIAEKIRLLDKELRRASV Sbjct: 361 CSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTAIAEKIRLLDKELRRASV 420 Query: 421 SLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVF 480 SLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVF Sbjct: 421 SLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVF 480 Query: 481 KHYPLMKVISAQQAISALKYMVDGEIYF 508 KHYPLMKVISAQQAISALKYMVDGEIYF Sbjct: 481 KHYPLMKVISAQQAISALKYMVDGEIYF 508 >UniRef50_C6URU6 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=C6URU6_ECO5T Length = 375 Score = 743 bits (1918), Expect = 0.0, Method: Compositional matrix adjust. Identities = 357/358 (99%), Positives = 357/358 (99%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS Sbjct: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY Sbjct: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL Sbjct: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL Sbjct: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 Query: 241 LANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLI 300 LANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLI Sbjct: 241 LANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLI 300 Query: 301 NLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINELL 358 NLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINE L Sbjct: 301 NLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINEFL 358 >UniRef50_B3WZ52 Hypothetical bacteriophage protein n=1 Tax=Shigella dysenteriae 1012 RepID=B3WZ52_SHIDY Length = 464 Score = 317 bits (811), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 179/478 (37%), Positives = 280/478 (58%), Gaps = 22/478 (4%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDT-ITYEDLGLSAFKGKHAQ 59 M++AI+Y+RFSS Q+ GDS+ RQ +L+ +WL N ++YLD+ ++++DLG SAF GKH + Sbjct: 1 MRRAISYIRFSSERQLKGDSVRRQSKLVTDWLDKNPEFYLDSSLSFKDLGKSAFSGKHLK 60 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 G +FL AIE G + G TLL+ESLDRLSR+ + A E L+ IL G+DV+TL D Sbjct: 61 -GGLGDFLTAIEKGLVKAGDTLLIESLDRLSRQDIDIASELLRRILRAGVDVVTLSDGEH 119 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 Y +SL +P +LIK+ILI QRA+EES KS RV+ +W +K++ + G ++ CP WL Sbjct: 120 YTRESLKDPLALIKSILIMQRAHEESLRKSERVQAAWNRKKE-LISEGIKVSRRCPAWLK 178 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDH---AVKNFSGKESAWGPSV 236 L+D R F PD+V+ ++ F LR++ S AI + LND ++ ++ K+ W + Sbjct: 179 LNDDRRTFTIIPDKVEVVKRAFDLRLQGLSFWAITRTLNDEGHLSLNQYTPKQKGWSDTA 238 Query: 237 IEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKN 296 ++KLL N+A+IG P+ G E+ GYYP +IS+ LFY VQ++ +G ++ S N Sbjct: 239 VKKLLRNRAVIGCFTPA------GREEVQGYYPAIISESLFYRVQQLNTGQYGRASVSSN 292 Query: 297 PMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINE 356 P+ +NL R ++KC CG T+++ + G Y CP R +RC +I R D I+ Sbjct: 293 PLSVNLFRGIIKCSECGATIVLGGYALKRFGMYRCPNRSANRCSAKAISRKQTDATILYM 352 Query: 357 LLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTAIAEKIRLLDKELR 416 L C + + EN D ++L+L+ +LQ KI+ + ++T I EK+R + L Sbjct: 353 LAL-CDRFE-TEN-TDTIDSLKLQREDLQRKISKMAELAIELDDMTIITEKLRDMKNALS 409 Query: 417 RASVSL----KTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTC 470 + + + K +K+ S D ID T+K G + L ++I+I+ + C Sbjct: 410 KLNHDIEEETKRIKAITTGSLKD---IDRTTKEGMVETQLLIKGVLKEIVIDAAKRRC 464 >UniRef50_Q0T5X8 Hypothetical bacteriophage protein n=5 Tax=Enterobacteriaceae RepID=Q0T5X8_SHIF8 Length = 312 Score = 271 bits (692), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 136/314 (43%), Positives = 205/314 (65%), Gaps = 12/314 (3%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDT-ITYEDLGLSAFKGKHAQ 59 M++AI+Y+RFSS Q+ GDS+ RQ +L+ +WL N ++YLD+ ++++DLG SAF GKH + Sbjct: 3 MRRAISYIRFSSERQLKGDSVRRQSKLVTDWLDKNPEFYLDSSLSFKDLGKSAFSGKHLK 62 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 G +FL AIE G + G TLL+ESLDRLSR+ + A E L+ IL G+DV+TL D Sbjct: 63 -GGLGDFLTAIEKGLVKAGDTLLIESLDRLSRQDIDIASELLRRILRAGVDVVTLSDGEH 121 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 Y +SL +P +LIK+ILI QRA+EES KS RV+ +W +K++ + G ++ CP WL Sbjct: 122 YTRESLKDPLALIKSILIMQRAHEESLRKSERVQAAWNRKKE-LISEGIKVSRRCPAWLR 180 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDH---AVKNFSGKESAWGPSV 236 L+D R F PD+V+ ++ F LR++ S AI + LND ++ ++ K+ W + Sbjct: 181 LNDDRRTFTIIPDKVEVVKRAFDLRLQGLSFWAITRTLNDEGHLSLNQYTPKQKGWSDTA 240 Query: 237 IEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKN 296 ++KLL N+A+IG P+ G E+ GYYP +IS+ LFY VQ++ +G ++ S N Sbjct: 241 VKKLLRNRAVIGCFTPA------GREEVQGYYPAIISESLFYRVQQLNTGQYGRASVSSN 294 Query: 297 PMLINLLRTVMKCE 310 P+ +NL R ++KCE Sbjct: 295 PLSVNLFRGIIKCE 308 >UniRef50_B3X0B7 Recombinase n=1 Tax=Shigella dysenteriae 1012 RepID=B3X0B7_SHIDY Length = 285 Score = 214 bits (545), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 117/291 (40%), Positives = 174/291 (59%), Gaps = 15/291 (5%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLD-TITYEDLGLSAFKGKH-A 58 M+K +Y+RFSS Q GDS RQ + I +WL + D+ LD ++++EDLG SAF G H Sbjct: 1 MRKVYSYIRFSSTKQAFGDSHRRQSKAIQDWLASHPDHILDESLSFEDLGRSAFHGDHLK 60 Query: 59 QSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNT 118 + GA FL+A++ G I P + LLVESLDR+SR+ + A E ++ IL GI V+TL D Sbjct: 61 EGGALRAFLEAVKQGLIPPDSVLLVESLDRVSRQSISHAQETIRAILEQGITVVTLSDGE 120 Query: 119 VYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWL 178 YN SL++ +LI+ I++ +R++ ES IKS R+K W KRQ + GT +T +CP WL Sbjct: 121 TYNRQSLDDSLALIRMIILQERSHNESVIKSDRIKKVWSHKRQQFEQDGTKITGNCPGWL 180 Query: 179 SLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGK--ESAWGPSV 236 L+ +F P V+TI IF ++ +SL+AIA+ LN + + K ++ W P+ Sbjct: 181 KLNSDGKSFSLIPHHVETIHRIFDEKLSGKSLHAIARDLNLENIPTITNKKVDTGWTPTR 240 Query: 237 IEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAP 287 + LL ++LIG+ G+S+ Y+P IS + F+AVQ I P Sbjct: 241 VRDLLLKESLIGVAY--------GVSD---YFPPAISKEKFHAVQMISKRP 280 >UniRef50_C7HJH4 Resolvase domain protein n=1 Tax=Clostridium thermocellum DSM 2360 RepID=C7HJH4_CLOTM Length = 383 Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 139/372 (37%), Positives = 193/372 (51%), Gaps = 19/372 (5%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 KA +Y+RFSSP Q GDSL RQ +L E+ K + DT+ D GLSAFKG H GA Sbjct: 4 KAYSYIRFSSPEQEKGDSLRRQIQLSEEYCKQHGLILDDTLKLTDRGLSAFKGIHRTKGA 63 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 EFL +E G I PG+ LLVE+LDRLSRE++ +A+ + I+ GI ++TL D Y+ Sbjct: 64 LGEFLRLVEEGKIPPGSVLLVENLDRLSREQILDALNQFTSIIKAGIKIVTLQDGMEYDQ 123 Query: 123 DSLNEPYS-LIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 +S+N+ ++ LI +I RA++ESE KS R+ W+ KR A G +TA P WL L Sbjct: 124 ESINQNWAQLIISITYMARAHDESETKSKRISAVWENKRSKAGNGGEKLTAKAPAWLKLS 183 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLND-----HAVKNFSGKESAWGPSV 236 RT F+ P+ K IELIF+ ++ + IA+ LN+ + K W S Sbjct: 184 QDRTKFILIPEAAKAIELIFRKKLAGKGAERIARELNEDPNIWEPPRTGPKKTGGWRGSY 243 Query: 237 IEKLLANKALIGICVPSYRARGKGIS---EIAGYYPRVISDDLFYAVQ-EIRLAPFGISN 292 I K+L ++A+IG P GK I Y+P VI +LFY VQ +++ N Sbjct: 244 INKILRSRAVIGEFQPHKLVDGKRQPIGDPIPDYFPPVIDKELFYQVQAQLQANAEKKGN 303 Query: 293 S-SKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHG--YYVCPM-RRLHRCDRPSIKRDL 348 + + + NL V+KC CG M G Y VC RRL C I+ Sbjct: 304 AGGRTGKVSNLFTHVIKCGLCGYPMHFINKGKPPKGGKYLVCDASRRLKTCTAKPIR--- 360 Query: 349 VDYNIINELLFN 360 Y +L F+ Sbjct: 361 --YEEFEQLFFD 370 >UniRef50_B8DJ05 Recombinase n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DJ05_DESVM Length = 590 Score = 202 bits (515), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 122/353 (34%), Positives = 184/353 (52%), Gaps = 26/353 (7%) Query: 6 AYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDT-------ITYEDLGLSAFKGKHA 58 +Y+RFSSP QM GDS RQ + + +Y L+ T++D G+SAFKGKH Sbjct: 16 SYIRFSSPEQMKGDSYRRQ-------YEASQNYALEQGLDLDEEFTFKDEGVSAFKGKHT 68 Query: 59 QSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNT 118 + GA +F++A++ G I PG+ L++E+LDRLSRE A L IL+ GI V+ L D+ Sbjct: 69 REGALGKFIEAVDQGAIRPGSYLIIENLDRLSREDPHTAYRLLSGILSRGITVVALQDHQ 128 Query: 119 VYNIDSL-NEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRW 177 +Y +S N+ L+ ++L RA++ES +KS+R+ +W KR+DA G MT++CP+W Sbjct: 129 IYTPESYANDFTQLLVSLLTMHRAHQESVVKSNRLSKAWAHKREDARTQGKAMTSTCPQW 188 Query: 178 LSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVI 237 L LD + DR + + IFK ++ + +A N + F G+ W S I Sbjct: 189 LKLDKTTGRYTVLEDRAEVVRRIFKETLDGKGATMLASQFNVEGIPTF-GRAKGWWNSYI 247 Query: 238 EKLLANKALIGICVPSY--RARGKGI---SEIAGYYPRVISDDLFYAVQEIRLAPFGISN 292 +K+L N+A+ G P + GK + + GYYP ++ + FY Q +RL I Sbjct: 248 KKILTNEAVFGRLQPHTLKQVEGKRVPVGEPVDGYYPAIVDRETFYLAQAMRLGRR-IPG 306 Query: 293 SSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHG--YYVC--PMRRLHRCDR 341 NL ++KC CG TM G Y VC R++ C R Sbjct: 307 GRIVARFSNLFTGLVKCGVCGATMAFDNKGTGRKGGTYLVCSEAKRKVGACQR 359 >UniRef50_A6T2W2 Site-specific recombinase n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T2W2_JANMA Length = 616 Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 146/466 (31%), Positives = 231/466 (49%), Gaps = 45/466 (9%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 M A +Y+RFS+P Q+ GDSL RQ L + + + T+ +DLGLSAF + + Sbjct: 1 MPIAYSYIRFSTPEQLKGDSLRRQTELSEAYAEKHGLQLDTTLKLQDLGLSAFDRSNVEK 60 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 GA FL AIE G I PG+ L+VESLDRLSR +V +A+E I+ GI ++TL D Y Sbjct: 61 GALGAFLKAIEQGRIKPGSFLIVESLDRLSRAQVTDALEVFLSIIRKGITIVTLNDGYEY 120 Query: 121 NIDSLNE-PYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 + ++ E Y L+ +I I QRA EESE K+ R++ +W K +A + +TA C W+ Sbjct: 121 STQTMRENSYKLLISITIMQRAFEESETKAKRLRAAWINKANNA--NVRKITARCGGWMK 178 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEK 239 L D R+ F P RV+ + I ++ ++ + IAK LND V +++G + W S + K Sbjct: 179 LSDDRSEFEFIPGRVEIVREIIQMSLDGMGQSVIAKRLNDRGVVSWTGA-NGWHTSTLAK 237 Query: 240 LLANKALIGICVPSYRARGKGISE---IAGYYPRVISDDLFYAVQEIRLAPFGISNSSKN 296 +L N AL G P + GK + + Y+P +++++ F +++ R + Sbjct: 238 ILNNPALYGAFQPHIKTDGKLLPHGDPVKDYFPALMTEEQFLILKKTRSERLFAGTGRRR 297 Query: 297 PMLINLLRTVMKCEACG-------NTMIVHAVSGSLH----GYYVCP-MRRLHRCDRPSI 344 + NLL + C CG NT +V+ GS VC RR +C Sbjct: 298 NHVPNLLSGIAVCGYCGGSMVLMGNTTLVNKPDGSTERINKKSLVCDNGRRGFKCWALRW 357 Query: 345 KRD-----------LVDYNI-INELLFNCSKIQPVENKKDANETLELKIIELQMKINNLI 392 K + L+D N+ +NE+ S +E D K+ +L K+ N+I Sbjct: 358 KYEHFETSFLTSCRLIDLNLMLNEVEAGTSLQSDIERLNDQITLQTSKLEDLGKKVTNII 417 Query: 393 VAL--------------SVAPEVTAIAEKIRLLDKELRRASVSLKT 424 A+ S+ E++A ++ +L+K+L A+ + KT Sbjct: 418 EAIEDGLASQTLKDRLQSIEQEISAGLDQKAILEKQLTDATFTSKT 463 >UniRef50_Q30XM6 Putative uncharacterized protein n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30XM6_DESDG Length = 644 Score = 194 bits (493), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 131/402 (32%), Positives = 204/402 (50%), Gaps = 18/402 (4%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 KA +Y+RFS+P QM GDS RQ L + + N DT+T++DLG+SAF+GK+A+ G Sbjct: 50 KAYSYLRFSTPDQMKGDSFRRQTELSRMYAEENGLDLDDTLTFQDLGVSAFRGKNAEEGE 109 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F++A++ G + G+ LLVESLDRLSR+ +A + ILN G+ ++TL D VY+ Sbjct: 110 LGAFIEAVDQGKVKRGSFLLVESLDRLSRQSPYKAFLQFSNILNRGLSIVTLQDGKVYSA 169 Query: 123 DSLNEPYS---LIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 S + L+ +I + QRA EES KS R+ WK KR+ A + +T+ CP WL Sbjct: 170 GSNGNDLAFSDLMVSIAVMQRAYEESLTKSRRLSEVWKAKRRKAADGSLKLTSRCPEWLK 229 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEK 239 LD K F +R ++ IF++ ++ IA N +K F G+ W S + K Sbjct: 230 LDKKNNTFHVIEERAAIVQRIFEMTLDGIGKRVIAATFNAEGIKPF-GRGKGWHYSYVTK 288 Query: 240 LLANKALIGICVPSYRARGKG------ISE-IAGYYPRVISDDLFYAVQEIRLAPFGISN 292 +L N+A IG P +G + E I Y+P VIS++ F + +R I+ Sbjct: 289 ILENEATIGRYQPHKMQEVQGKRKRVPVGEPIENYFPAVISEETFLKAKRMR-KERKIAG 347 Query: 293 SSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHG--YYVCPMRRLH-RCDRPSIKRDLV 349 ++ NL + C CG M G Y VC R+ C R S + Sbjct: 348 ANVGNRYSNLFSGLAVCGVCGGVMHFENKGKPPKGGTYLVCSNARMKLGCKRYSWRYPQA 407 Query: 350 DYNIINELL-FNCSKIQPV--ENKKDANETLELKIIELQMKI 388 +I+ L N ++ P E +++ E L+ K++ ++ ++ Sbjct: 408 QAHILMNLTELNYRELFPTLYEKSRESVERLQDKLLVMEERL 449 >UniRef50_D0XHM7 Putative uncharacterized protein n=1 Tax=Vibrio harveyi 1DA3 RepID=D0XHM7_VIBHA Length = 515 Score = 191 bits (485), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 146/446 (32%), Positives = 223/446 (50%), Gaps = 40/446 (8%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 MK I Y RFSS GQ GDSL RQ RL EW K N+ ++ Y D G+S FKGKHA Sbjct: 1 MKNVILYERFSSLGQKKGDSLVRQSRLCDEWCKKNNGKLINA--YVDEGVSGFKGKHAAV 58 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 GA S+ L AIE+GYI T LL+E+LDRLSRE++ A++R IL GI+++TL D V+ Sbjct: 59 GALSKILSAIENGYIERDTYLLIENLDRLSREEISTALDRFSSILRAGINIVTLMDGKVF 118 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 +S N L+ A++ RANEES KS R W KR+ +E G P WL Sbjct: 119 TPESANNLPDLMWALMTMARANEESATKSKRASSVWLSKRK-FVEGGGKPKFKTPNWLDY 177 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 D+K+ + + ++ LIF+L ++ +S+N +A LN+ G W S + + Sbjct: 178 DEKKQEYKLNK-HAASVALIFELYLKGKSINRVAMDLNELKTPPI-GYSKKWSHSTVRWI 235 Query: 241 LANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQ---EIRLAPFGISNSSKNP 297 L +K G+ + +YP IS + FY Q R G + + K P Sbjct: 236 LDSKQTYGVLDAKTMYQDD-------FYPAAISKETFYKAQSELNRRKNKTGRTRNDKTP 288 Query: 298 MLINLLRTVMKCEACGNTMIVHAVSGSLHG------YYVCPMRRL----HRCDRPSIKRD 347 NLL + C CG ++ + + S G Y +C +R C P+ + Sbjct: 289 ---NLLTGLACCGVCGESITMQGKNHSSTGKAGNFKYLMCSTKRYSHVESHCGLPNFRYK 345 Query: 348 LVDYNIINELLFNCSKIQPVENKKD-------ANETLELKIIELQMKINNLIVALSVAPE 400 V+ I+ +L + + + KD E++ ++ +++ +I+NLI AL+V+ + Sbjct: 346 YVEM-ILAVILSSIDTLPKSRDDKDNIVRIKTEIESIGEELEDIEKQIDNLIEALAVS-K 403 Query: 401 VTAIAEKIRLLDK---ELRRASVSLK 423 IA K+ L++ EL+R +L+ Sbjct: 404 SDRIAAKLAQLEQNEAELKRNREALE 429 >UniRef50_B3G100 Recombinase/resolvase n=1 Tax=Pseudomonas aeruginosa RepID=B3G100_PSEAE Length = 543 Score = 185 bits (469), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 145/490 (29%), Positives = 232/490 (47%), Gaps = 37/490 (7%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYE--DLGLSAFKGKHAQ- 59 KA +Y+RFS+P Q GD RQ + E+ + + Y D G+SA++G + Sbjct: 20 KAYSYVRFSTPEQAKGDGRRRQYKAAIEYADKHDLELVKDGNYAFLDAGVSAYRGNNINR 79 Query: 60 -SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNT 118 S + F + ++ G I PG+ LLVESLDRLSRE+V EA+ R +LN GI V+T D T Sbjct: 80 VSSSLGRFYEYVKEGKIEPGSYLLVESLDRLSREQVTEALVRFLDLLNSGIIVVTFGDGT 139 Query: 119 VYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWL 178 VY + EP L+ +I RA+ ES +K RV +W++K+ A G + A+CP+WL Sbjct: 140 VYKKSA--EPMQLVMSISHMSRAHSESSVKGQRVSDAWQQKQALARSEGVPLGAACPQWL 197 Query: 179 SLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSG----KESAWGP 234 S D + A+ P+RV ++ +F+L ++ AI K N+ V F K WG Sbjct: 198 SFDGE--AYKVIPERVCVVKRVFELTVQGYGQRAIVKIFNNEGVPVFGSEKRNKSGLWGS 255 Query: 235 SVIEKLLANKALIGICVPSYRARGK---GISEIAGYYPRVISDDLFYAVQEIRLAPFGIS 291 S I K+L N++++G P+ A G+ I +YP V+ ++L+YA E R + +S Sbjct: 256 SSIAKILGNRSVLGEYQPTVWAEGRRRISGEPIKDFYPAVVDEELYYAALEGR-SSRNVS 314 Query: 292 NSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHG--YYVCPMRRLHRCDRPSIKRDLV 349 ++K N+ V +C C + M + G Y C C SI+ D Sbjct: 315 RATKTSSNFNVWAKVAQCAYCKSPMHLVNKGKPPKGRKYLRCSRSTKGACINRSIRLDQS 374 Query: 350 DYNIINELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVAL-------------S 396 + + E+L +K+ KD + L +I+EL ++ + V L + Sbjct: 375 EI-VFKEIL---AKLNLASLIKDNAQVLRKRIVELDGRLESAKVKLLEVSNLLECHPSRT 430 Query: 397 VAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYK 456 +A + +I L+ E +L + N F +DL S GR L + Sbjct: 431 LAQTAVNVEGEITQLESERDECKATLASEHITDKNEL--FRRLDLDSYEGRFLANQQIQR 488 Query: 457 TFEKIIINTD 466 ++++ D Sbjct: 489 LKVRVLLKHD 498 >UniRef50_Q87J19 Putative site-specific recombinase n=1 Tax=Vibrio parahaemolyticus RepID=Q87J19_VIBPA Length = 575 Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 111/343 (32%), Positives = 187/343 (54%), Gaps = 9/343 (2%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 K A +Y R S+ Q+ G RQR I E + + L T+ DLG+SA+KG +A +G Sbjct: 3 KIAYSYTRLSTEKQIKGHGFTRQREAI-EKVCCQHGWQLSDQTFNDLGVSAWKGANATTG 61 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 A S+F+D + G I P + L+VES+DRLSR++V +++ + +L G+ + TL D+ +Y Sbjct: 62 ALSQFIDLAKKGAIRPNSVLIVESVDRLSRQQVDKSLRLMLELLEVGVSIFTLSDSKLYT 121 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 +S + L+ ++ AQRA+EESEIKS RV+ + KKK ++ + G I+T CP WL++ Sbjct: 122 TNSDSVMLDLMMWLMTAQRAHEESEIKSLRVRAA-KKKNKELIRKGIIVTRKCPEWLTVS 180 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 D ++ F+ + +R + + IF + S IA LN+ + + GK S W I LL Sbjct: 181 DDKSCFLVNNERAEIVRKIFTWYSQGFSTKPIALKLNELGIP-YWGKSSTWSYRHIRSLL 239 Query: 242 ANKALIGICVPSYRARGKGISE---IAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPM 298 ++ +IG R G+ +++ + YYP +I L+ Q+I+ + Sbjct: 240 KHRGVIGEIQLLKRIDGRDVADGDPVEDYYPAIIDRGLWATCQQIKSSKTTAKGRVVERG 299 Query: 299 LINLLRTVMKCEACGNTMIVHA--VSGSLHGYYVCPMRRLHRC 339 + NL R ++KCE CG+ + +++ V G + + C + C Sbjct: 300 MANLFRGLLKCE-CGSGLAINSSTVKGRTYRFLRCSQLKTTGC 341 >UniRef50_Q1V893 Putative uncharacterized protein n=1 Tax=Vibrio alginolyticus 12G01 RepID=Q1V893_VIBAL Length = 550 Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 114/363 (31%), Positives = 194/363 (53%), Gaps = 14/363 (3%) Query: 4 AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAF 63 A +Y+RFSS Q GDS RQ ++ + L T DLGLSA+ G H + GA Sbjct: 6 AYSYVRFSSLEQAKGDSFRRQTEAAQKYC-YEQNLELADFTLRDLGLSAYHGNHVKEGAL 64 Query: 64 SEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNID 123 EF++A++ G I G+ LLVES+DRLSRE++ A++R +L GI+++TL DN V+ ++ Sbjct: 65 GEFINAVQQGQIPKGSYLLVESMDRLSRERISIALQRFMHLLELGINIVTLQDNRVFTVE 124 Query: 124 SLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDK 183 SL+ L+ ++++ RA+EESE KS R++ + K+KR+ A E+ + P W+ L Sbjct: 125 SLDNIGDLMMSLVLMMRAHEESETKSKRLREAHKEKRRLARENLKPTRYNNPHWIKLTSN 184 Query: 184 RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLAN 243 + P+RV I+ IF++ + +I + N+ ++ + ++ W + I+K+L Sbjct: 185 GYELI--PERVAIIKRIFQMTINGMGATSIHRRFNEEGLEPWGRSKTGWHSTYIKKILRA 242 Query: 244 KALIGICVPSYRARGKGISE---IAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLI 300 + ++G P GK + + I G+YP+ I F Q + ++ + ++ Sbjct: 243 RTVLGEYQPHRNEGGKRVEDGDPILGFYPQAIDVSTFKKAQLAIASRTNKTSGIRKSLIN 302 Query: 301 NLLRTVMKCEACGNTM-IVHAVSGSLHGYY-VCPM--RRLH----RCDRPSIKRDLVDYN 352 NL +KC+ CG +M V GS G Y VC ++ H +C S++ +V+ Sbjct: 303 NLFTGFVKCKNCGASMNYVDKGRGSKGGQYLVCSRAKKKTHYDGIKCQYASMRYVVVEAA 362 Query: 353 IIN 355 I+N Sbjct: 363 ILN 365 >UniRef50_B5EDN9 Recombinase n=1 Tax=Geobacter bemidjiensis Bem RepID=B5EDN9_GEOBB Length = 545 Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 118/343 (34%), Positives = 187/343 (54%), Gaps = 18/343 (5%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 M +A +Y+RFS P Q GDSL RQ E+ + LD ++ DLG SA++G HA+ Sbjct: 1 MARAFSYLRFSRPEQRKGDSLRRQTEAAREYAD-RHNLALDDFSFRDLGHSAYRGSHAEI 59 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 G S+FL AI+ G++ PG LL+E+ DRLSR+ + EA + L+ I N GI V+TL D +Y Sbjct: 60 GGLSQFLAAIDTGHVKPGDYLLIENFDRLSRQVLDEAFDLLRTICNKGISVVTLQDGNIY 119 Query: 121 NIDSLNEPY-SLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 + +SL+ + SL+ A+ RA++ES +KS R+ +W KR+D +T P WL Sbjct: 120 DKESLSRNFASLMWALFAFARAHDESAVKSDRLLSTWHNKRKDM--RVKPLTGKLPGWLR 177 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFS-GKESA--WGPSV 236 L ++ V + DR + ++ IF +E +S I LN + V+ + GK+ + W S Sbjct: 178 LSAEKQITVIE-DRAEVVKEIFTRYVEGQSPRTIVNRLNQNNVECWGIGKQKSKKWNSSY 236 Query: 237 IEKLLANKALIGICVPSYRARGKGISE-------IAGYYPRVISDDLFYAVQEIRLAPFG 289 I+K+L N+++IG P ++ +GI + + Y+P +I + F VQE+R Sbjct: 237 IQKILDNESVIGRFTP-HKIMFEGIKKTRVPLETVNDYFPVIIDAETFNRVQEVRTRN-K 294 Query: 290 ISNSSKNPMLINLLRTVMKCEACGNTMI-VHAVSGSLHGYYVC 331 + L N + +C CG+ ++ V+ S S Y VC Sbjct: 295 LGRRKATGGLTNAFSMLFRCPVCGSWLVRVNKNSKSNWQYLVC 337 >UniRef50_B9M0D0 Recombinase n=1 Tax=Geobacter sp. FRC-32 RepID=B9M0D0_GEOSF Length = 619 Score = 182 bits (461), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 121/350 (34%), Positives = 181/350 (51%), Gaps = 14/350 (4%) Query: 5 IAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFS 64 I+Y+RFS+ Q G S+ RQ L ++ + + D ++Y DLG SA+ G H + G F Sbjct: 7 ISYIRFSNVSQSDGSSVERQLELSQKYAEEHGLILDDKLSYRDLGRSAYSGDHVRRGHFG 66 Query: 65 EFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDS 124 EFL+ + G I G+ LLVESLDRLSRE V +A + ++I+ I ++TLCD Y ++ Sbjct: 67 EFLELVRQGSIPTGSVLLVESLDRLSRENVLDAFAQFQVIVGEDIKIVTLCDGMEYTREN 126 Query: 125 LNEPYS-LIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDK 183 LN + LI ++ I RA EES KS R++ + + KRQ+ TA+CP WL L Sbjct: 127 LNSDFGKLIISLTIMARAYEESCRKSERIRAANRFKRQNL--DKVKYTANCPTWLRLIKS 184 Query: 184 RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLAN 243 F DR + IF + E + IA+ LN ++ W S I K+L++ Sbjct: 185 ENRFEVIHDRAAIVNRIFSMSYEGMGIKTIARILNHEKIQP-PRSSLGWCQSSIRKILSS 243 Query: 244 KALIGICVPSY--RARGKGISE---IAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPM 298 +++IG P RA K + E + GY+PR++ D++++AVQ RL G S + Sbjct: 244 RSVIGEYQPHIYNRATKKHVPEGSPVPGYFPRIVEDEVYFAVQ-ARLCN-GTHISGRTAK 301 Query: 299 LINLLRTVMKCEACGNTM--IVHAVSGSLHGYYVCPM-RRLHRCDRPSIK 345 + NL + KC CG M + H + VC RR +C S K Sbjct: 302 IQNLFGGITKCGYCGARMDIVSHKNRNEISRLLVCDQARRGVKCSYISFK 351 >UniRef50_Q1QRV3 Recombinase n=1 Tax=Nitrobacter hamburgensis X14 RepID=Q1QRV3_NITHX Length = 565 Score = 181 bits (459), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 132/434 (30%), Positives = 217/434 (50%), Gaps = 27/434 (6%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 +KK +Y+RFS+P Q GDSL RQ +W +D + DLG+SA+ G + + Sbjct: 6 LKKVYSYIRFSTPEQAKGDSLRRQIDNARQWCS-ERGLVMDE-SLRDLGISAYTGTNRTT 63 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 GA FLD +E G I G+ LLVESLDRLSRE V +A RL ++ GI ++TL D Y Sbjct: 64 GALRSFLDLVESGKIPKGSILLVESLDRLSREAVIDAASRLFDLIRSGITIVTLVDGQEY 123 Query: 121 NIDSLNEPYS-LIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 + + LN +S LI +I + RA+EES K RV +W KK+Q A E G +T CP W+ Sbjct: 124 SAERLNNDWSPLIVSIAVMARAHEESRTKGKRVGEAWAKKKQAAREEGRPLTRRCPAWIQ 183 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNF----SGKESAWGPS 235 + +K+ + P++ + ++ IF++ +E I K LN + F + + W S Sbjct: 184 IANKKYEVI--PEKAQIVQRIFRMAIEGHGSRTILKALNSDGIPTFMVSKKKQNNGWQTS 241 Query: 236 VIEKLLANKALIGICVPS---YRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISN 292 + +LL ++ ++G P + AR + G+YP +I + F+ Q + Sbjct: 242 SLRRLLTSRTVLGEYQPHVGRHWARKPEGDPVKGFYPAIIDEATFWRAQSA-MESRRGRG 300 Query: 293 SSKNPMLINLLRTVMKCEACGNTMIVHAVS-GSL---HGYYVC-PMRRLHRCDRPSIKR- 346 K + +LL+ + KC CG+ M H ++ G L Y+ C RR C R Sbjct: 301 GRKGEGVAHLLQGLAKCGDCGSAM--HIINKGPLPKGGTYFECSAARRKFECSNTERWRV 358 Query: 347 DLVDYNIINELLF-NCSKIQPVENK---KDANETLELKIIELQMKINNLIVALSVAPEVT 402 D ++ ++ L + + + E + D + L+ K+ + + + LIV + + Sbjct: 359 DRIEARLLKALTYIDVDAVVFGEQRDEVSDKVDILQAKLADAEQRRKRLIVLVESGDD-- 416 Query: 403 AIAEKIRLLDKELR 416 A AE+ + + E++ Sbjct: 417 AAAERFQTVAAEVK 430 >UniRef50_Q39QW8 Resolvase-like:Recombinase n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39QW8_GEOMG Length = 622 Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 140/427 (32%), Positives = 212/427 (49%), Gaps = 39/427 (9%) Query: 5 IAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFS 64 I+Y+RFS Q G SL RQ +L + + + D +Y+DLG SAF +H + G F Sbjct: 7 ISYIRFSKATQAEGSSLERQLQLSRTYAEEHGLVLDDKHSYQDLGKSAFTSEHVKEGEFG 66 Query: 65 EFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDS 124 FL+ ++ G + G+ LLVESLDRLSRE V A ++ + IL+ GI ++TL D Y + Sbjct: 67 VFLEFVKQGRVPKGSVLLVESLDRLSRESVLTAFKQFQEILDAGIKIVTLSDKMEYTKEG 126 Query: 125 LNEPY-SLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDK 183 ++ ++ I RANEES KS R+ +W+ KR++ +TA+CP WL L Sbjct: 127 FEANIGNIFISLGIMARANEESLRKSERICAAWRLKRKNL--HNIKLTANCPGWLELTPD 184 Query: 184 RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLAN 243 + F+ DRV+ ++ IF+L + + AI+ LN ++ F K W + + K+L+N Sbjct: 185 KKDFILKEDRVEIVKQIFELSLSGLGVKAISTILNKQKIEPFRSK-IGWYQTTVRKILSN 243 Query: 244 KALIGICVPSY--RARGKGISE---IAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPM 298 A+IG P K + + I Y+P +I D FYAVQ +L G + Sbjct: 244 SAVIGEFQPHVFGSKHSKPVPDGELIKDYFPPIIDTDTFYAVQ-AKLKN-GAHRPGRTAK 301 Query: 299 LINLLRTVMKCEACGNTMIV---HAVSGSLHGYYVC-PMRRLHRCDRPSIKRDLVDYNII 354 + NL +C CG+ M V H V G + Y VC RR +C S+K N I Sbjct: 302 VENLFSGYTRCGYCGSRMDVVARHNVGGEVR-YLVCDSARRGVKCSYISMK-----CNEI 355 Query: 355 NELLFN-CSKIQ-----PVENKKDANETLEL---------KIIELQMKINNLIVALSVAP 399 + F C +I E + D N EL K++++Q +I+ L V L Sbjct: 356 EKAFFEYCREIDIRYVLRAEQQADQNRLNELRKSLTARNGKLMKVQKQIDMLNVFLD--- 412 Query: 400 EVTAIAE 406 ++T AE Sbjct: 413 DITERAE 419 >UniRef50_Q2YCV5 Recombinase n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YCV5_NITMU Length = 544 Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 136/416 (32%), Positives = 205/416 (49%), Gaps = 15/416 (3%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDL---GLSAFKGKH 57 M+KA +Y+R S+ Q+SGDSL RQR ++ K + ++T+ +DL G+S FKG + Sbjct: 1 MRKAYSYIRMSTDKQLSGDSLRRQREASEKYAKAHGLELIETLDGKDLRDIGVSGFKGAN 60 Query: 58 AQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDN 117 ++ G S FL+ + G I + LL+ES DRLSR V +A ILN GI++ITL DN Sbjct: 61 SRRGVLSVFLEHLNDGKIDANSILLIESFDRLSRADVLDAFSLFTNILNKGIEIITLSDN 120 Query: 118 TVYNIDSLN-EPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPR 176 Y DS+ P L I I RANEES KS R W KR +A + +T+ CP Sbjct: 121 QRYTRDSVRVNPGQLFLTIGIMTRANEESVTKSKRGLSVWNNKRDNAQKKP--ITSRCPA 178 Query: 177 WLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSV 236 WL+ + F +R + + LIF+L + +I++YLN H + F G W S Sbjct: 179 WLTYSSESEKFEVIEERARVVRLIFELCAKTSGTWSISRYLNRHNIPVF-GDAQFWQKSY 237 Query: 237 IEKLLANKALIGICVPSYRARGKGI---SEIAGYYPRVISDDLFYAVQEIRLAPFGISNS 293 + K+L+N+A++G P+ R G+ I I YYP +IS F+ R + Sbjct: 238 VNKILSNRAVLGEFQPNSRESGQRIPVGKVIENYYPAIISATEFHLAWAARDRRNKTGSG 297 Query: 294 SKNPMLINLLRTVMKCEACGNTMIV--HAVSGSLHGYYVCPMRRLHR-CDRPSIKRDLVD 350 K NL ++ C CG+ M V V + VC C+ K LV+ Sbjct: 298 RKGINFSNLFSGLVYCGNCGSKMSVRNRGVPPKGGKWLVCQNHLAGAGCEMREWKLPLVE 357 Query: 351 YNIINELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTAIAE 406 + I + L+ + + N K A +E ++ LQ++ L + A E++A E Sbjct: 358 -DAIFKHLYEVDFSELLGN-KSAGFDIEKELFALQVEQKELESKMDQAIEMSAAQE 411 >UniRef50_B9M114 Recombinase n=1 Tax=Geobacter sp. FRC-32 RepID=B9M114_GEOSF Length = 613 Score = 178 bits (452), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 130/358 (36%), Positives = 194/358 (54%), Gaps = 28/358 (7%) Query: 6 AYMRFSSPGQMSGDSLNRQ---RRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 +Y+RFS+ Q+ G SL RQ RL A+ + D +++T +DLGLSAF GKH GA Sbjct: 12 SYIRFSTLEQLKGYSLARQMEKSRLYAQEKGLVLD---ESLTLKDLGLSAFSGKHRTRGA 68 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 EFL+ + G I + LLVESLDRLSR+K+ A ++L+ I ++GI V+TL D + Y Sbjct: 69 LGEFLELAKRGKIPKNSILLVESLDRLSRQKIMTAFDQLREITSYGIIVVTLIDRSEYRH 128 Query: 123 DSLNEPYS-LIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 ++ N+ S + ++ I R+ +ES KS R +WK KR++ E +TA P WL LD Sbjct: 129 ETWNDNISQVFTSLGIMARSYDESLTKSIRHIDNWKAKRENIAEKK--LTARAPAWLKLD 186 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 + + F RV + IF + ++ +IAK LN + + G ++ W PS ++K+L Sbjct: 187 ESKIKFNGIEYRVAIVRRIFNMALQGIGAASIAKKLNTEKIPAWKG-DNGWFPSYVKKIL 245 Query: 242 ANKALIGICVP----SYRARGKGISEIAG-----YYPRVISDDLFYAVQE--IRLAPFGI 290 NKA++G P + G+ + + G YYPR+I+D++FY VQE FG Sbjct: 246 HNKAVLGEFEPHIMVTDEEAGEKVRKPTGEVFSDYYPRIIADEVFYRVQERCKSNKDFG- 304 Query: 291 SNSSKNPMLINLLRTVMKCEACGNTM-IVHAVSGSLHGYY-VCP-MRRLHRCDRPSIK 345 KN L NL + KC CG M V+ + + G Y VC RR C+ S + Sbjct: 305 ---GKNGKLSNLFGGLAKCGYCGKPMQFVNKGNQTKAGMYLVCDNARRKMGCEYHSFR 359 >UniRef50_Q1Z7J0 Site-specific recombinase n=1 Tax=Photobacterium profundum 3TCK RepID=Q1Z7J0_PHOPR Length = 609 Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 122/343 (35%), Positives = 179/343 (52%), Gaps = 18/343 (5%) Query: 1 MKK-AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 MKK A +Y+RFS+P Q GDS RQ ++ + D L + D G+SAFKG++ Q Sbjct: 1 MKKIAYSYLRFSTPRQAKGDSYRRQMEAARKYAE-EKDLSLQEDAFNDFGISAFKGRNVQ 59 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 +GA +FL ++ G I G LLVE+ DRLSR + EA+ +L+ ++ GI V+TL D + Sbjct: 60 NGALGDFLTLVQDGQIPKGAYLLVENHDRLSRTEPEEALHQLQSLVRAGIVVVTLHDGEM 119 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTAS-CPRWL 178 Y ++ L+K+I+ +RA+ ES IKS R K W+K+RQD+L++G + AS P WL Sbjct: 120 YKRGEMD-VMRLMKSIIYMERAHNESMIKSQRGKSIWEKRRQDSLQTGKVCRASRLPSWL 178 Query: 179 SLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNF-SGKESAWGPSVI 237 + ++ V D D+ + + L+FK IA+ LND V F +G E W +VI Sbjct: 179 KWEGEQV--VIDEDKAEAVRLMFKWCAGGAGYQTIARRLNDTRVPTFRTGVE--WRAAVI 234 Query: 238 EKLLANKALIG-ICVPSYRARGKGI---SEIAGYYPRVISDDLFYAVQEIRLAPFGISNS 293 +L N+A IG + K I I YYP ++S F AVQ S Sbjct: 235 AAILKNRAAIGEFQYHQKNSEDKRIPIGEPINNYYPSIVSVSSFQAVQSTIRKRDNHSGQ 294 Query: 294 SKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHG-----YYVC 331 NL +++KC CG+ M V HG ++VC Sbjct: 295 FSKGRAHNLFTSLIKCGNCGSPMTVATKGRKTHGSPASTHFVC 337 >UniRef50_Q3J212 Putative site-specific recombinase n=1 Tax=Rhodobacter sphaeroides 2.4.1 RepID=Q3J212_RHOS4 Length = 509 Score = 174 bits (442), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 138/431 (32%), Positives = 209/431 (48%), Gaps = 37/431 (8%) Query: 10 FSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFSEFLDA 69 SS Q+ GDS RQ A++ + +D DLG+SAFK + +GA F+ Sbjct: 1 MSSAIQIKGDSFRRQAEASAKYAAEHDLDLIDDYKLADLGVSAFKSDNLTTGALGRFVAE 60 Query: 70 IEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDSLNEPY 129 E G I G+ LL+ESLDRLSR+K+ +A IL G+ ++TL D VY+ S ++ Sbjct: 61 CEAGEIEAGSFLLIESLDRLSRDKILDAFSLFARILKTGVKIVTLSDGQVYD-GSSDQVG 119 Query: 130 SLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDKRTAFVP 189 S+ AI + R+N+ES+IKS+R +W +KR+ A E G M++ CP WL L R +++ Sbjct: 120 SIYYAISVMIRSNDESKIKSTRGLANWSQKRKLAAEHGVKMSSQCPAWLKLSVDRKSYLI 179 Query: 190 DPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLANKALIGI 249 D +R K ++ IF+ + N I K LN V F G+ + W + + K L N+A++G Sbjct: 180 DKERAKIVQRIFEASASGKGANLITKELNRDKVPTF-GRGALWAEAFVSKTLRNRAVLGE 238 Query: 250 CVPSYRARGK---GISEIAGYYPRVISDDLFYAVQ---EIRLAPFGISNSSKNPMLINLL 303 P GK I GY+P VI ++LF VQ RL G ++ N+ Sbjct: 239 FQPGQYVSGKRQPAGDPIPGYFPPVIEEELFDIVQASLRGRLLAGGRRGEGQS----NIF 294 Query: 304 RTVMKCEACGNTMIVHAVSGSL------HGYYVCPMR-RLHRCD-RP-----------SI 344 V C CG+ M H GS H Y C R CD +P + Sbjct: 295 THVAFCGYCGSKM-RHRSKGSRVKGNPPHRYLTCFNRFNGPGCDCKPLPYAAFERSFLTF 353 Query: 345 KRDLVDYNIINELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTAI 404 RD VD + E S+ + + ++ NE K+ + +I + ++ + AP++ I Sbjct: 354 VRD-VDLRGLLEGAKRKSEAKTIADRITVNEE---KVRKADERIRDYLIKIEGAPDLAEI 409 Query: 405 -AEKIRLLDKE 414 E+IR L E Sbjct: 410 FMERIRELKAE 420 >UniRef50_UPI0001BC6B74 site-specific recombinase n=1 Tax=Vibrio parahaemolyticus AQ4037 RepID=UPI0001BC6B74 Length = 531 Score = 174 bits (440), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 135/423 (31%), Positives = 222/423 (52%), Gaps = 28/423 (6%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 M A +Y+RFSS Q GDSL RQ +L AE + ++ L T+ DLG+SAF ++Q Sbjct: 1 MAIAYSYIRFSSSQQSQGDSLRRQTQL-AEKYCIENNLTLSDTTFRDLGVSAFHSTNSQE 59 Query: 61 -GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 +FL A+ G I G+ LLVESLDRLSR KV A+ ++ I+ G+ ++TL DN + Sbjct: 60 DSGLGQFLSALNQGRINEGSYLLVESLDRLSRAKVQTALRQMLNIIELGVKIVTLMDNRI 119 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 Y+ +S + LI ++ I +RA+ ES+ KS R+K +W KRQ+ + T +S P WLS Sbjct: 120 YDQES--DTTDLIISLTIMERAHNESKTKSERIKAAWVHKRQNP--TTTNRHSSTPFWLS 175 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEK 239 L+ + + V+ + I++L ++ + I ++LN+ +K + K +W + + + Sbjct: 176 LNPDKKTYKLKEKYVEIVRKIYQLSIDGWGVIKIVRHLNESNIK--APKGGSWATTTVSR 233 Query: 240 LLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFY---AVQEIRLAPFGISNSSKN 296 +L +KA++G P + ++ I YYP +I + +Y Q R P + Sbjct: 234 VLTSKAVLGHYEPMQNRKSLNLT-IEDYYPSIIDEATYYLSRQRQNERSKPEAAGRKTNY 292 Query: 297 PMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINE 356 P N L + KC+ CG++M S SL Y C + C I+ +L+ Y + E Sbjct: 293 P---NPLSQIAKCKLCGSSMYYENKSKSL-KYLTCREFKKGSCTNKPIRIELI-YRFVCE 347 Query: 357 LLFNC-------SKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEV--TAIAEK 407 +FN +K+ NKKD N+ EL+ + + + N L LS++ + T I E+ Sbjct: 348 -VFNSPMYYQYQAKLVEKSNKKDNNKLEELEAKQTEQE-NALRALLSMSNDFSNTIIQEE 405 Query: 408 IRL 410 I++ Sbjct: 406 IKV 408 >UniRef50_B5XQB9 Site-specific recombinase, resolvase family n=6 Tax=Enterobacteriaceae RepID=B5XQB9_KLEP3 Length = 523 Score = 174 bits (440), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 139/457 (30%), Positives = 224/457 (49%), Gaps = 25/457 (5%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 M++ I Y+RFSS Q GDS+ RQ+ L WLK N D + + D G SA+ G H + Sbjct: 1 MRQVITYLRFSSKPQERGDSIRRQKGLFERWLKDNPDAKV-VDEFSDEGASAYHGHHLK- 58 Query: 61 GAFSEFLDAIEHGYILPG-TTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 G F L I+ G L G T LLVES RL+R+K + LI G+DVI L + Sbjct: 59 GDFGRMLQNIQDGKYLSGQTVLLVESETRLNRQKARNTENLVDLITGKGVDVICLESGKI 118 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 Y ++++ + I+ + A A+++S+ KS +V +W+ + Q ALE +T + P W+ Sbjct: 119 YTSTNIDDLDTSIQLKIAAHIAHQQSKEKSIKVSAAWEHRAQLALEGKQQLTKNVPGWID 178 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSV--I 237 D ++ + T+ IF L + SL+ IA+YL + +K+FS +E A G SV + Sbjct: 179 PDTRKLN-----EHSSTVVTIFDLLLSGESLHNIARYLQANNIKSFSRREKANGFSVHSV 233 Query: 238 EKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEI-RLAPFGISNSSKN 296 +L +++ +G S R I YY I F QEI G + +S N Sbjct: 234 RTILRSESTVGTLAASKRNDRPA---IPNYYEPAIDVATFNKAQEILSKNRVGRAPASDN 290 Query: 297 PMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINE 356 P+ INL + +++C+ CG ++ V + G Y C RC+ P+IKR D +++ Sbjct: 291 PITINLFKGIIRCQ-CGASVHPTGVKATYQGVYRCNNVPDGRCNVPTIKRKPFDKWMLDN 349 Query: 357 LLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTAIAEKIRLLDKELR 416 ++ + K E +E +I + K+ L +VT + E+++ L+ + Sbjct: 350 IIGFLERSDGNNTDKRKAE-IEYQISLVTSKLKKAATLLLELDDVTELKEQVKELNIQRI 408 Query: 417 RASVSL------KTLKSKGVNSFSDFYAIDLTSKNGR 447 L +TL K ++ S+ IDLT+K GR Sbjct: 409 NMQSELDDLNQRETLSDKPLHHLSE---IDLTTKAGR 442 >UniRef50_Q98DK0 Site-specific recombinase n=1 Tax=Mesorhizobium loti RepID=Q98DK0_RHILO Length = 578 Score = 174 bits (440), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 108/305 (35%), Positives = 160/305 (52%), Gaps = 7/305 (2%) Query: 15 QMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFSEFLDAIEHGY 74 Q+ GDSL RQ ++ + ++ ED+G+SAFKG + +G +FL+A++ G Sbjct: 6 QLKGDSLRRQTERSKQYADDHDLQLVEDFRLEDIGVSAFKGDNLSTGELGKFLEAVKAGR 65 Query: 75 ILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDSLNEPYSLIKA 134 I G+ LLVES DRLSR+K+ A+ I ++GI+++TL DN +Y E LI + Sbjct: 66 IPKGSYLLVESFDRLSRQKLSAAVPLFFDITSNGINLVTLSDNQLYKAGEA-EFAQLIIS 124 Query: 135 ILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDKRTAFVPDPDRV 194 I + RANEESEIKS R+ +W KR+ A++ +T CP WL L D R F DR Sbjct: 125 IAMMARANEESEIKSQRLSAAWDAKRR-AIDDKK-LTGLCPAWLELSDDRKNFGVLEDRA 182 Query: 195 KTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLANKALIGICVPSY 254 + + IF+ + I + LND F G+ + W S + K+L +A++G P Sbjct: 183 QIVRRIFEDSASGQGSFVITRRLNDLGTHAF-GRSNGWVQSYVTKILQTRAVLGEFQPHT 241 Query: 255 RARGKGI---SEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEA 311 + GK I I GYYP+++ ++LF Q R K L NL + KC Sbjct: 242 KQNGKRIPFGDPIPGYYPKIVDEELFLRAQFARGKRRIEGGGRKGEALRNLFTHLAKCGY 301 Query: 312 CGNTM 316 CG+ M Sbjct: 302 CGSPM 306 >UniRef50_Q88NT6 Recombinase-related protein n=1 Tax=Pseudomonas putida KT2440 RepID=Q88NT6_PSEPK Length = 563 Score = 174 bits (440), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 150/502 (29%), Positives = 236/502 (47%), Gaps = 42/502 (8%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITY--EDLGLSAFKGKH- 57 M K +Y+RFSS Q +GDS RQ + + N D Y D G SAFKGKH Sbjct: 1 MSKVFSYIRFSSAKQSAGDSYARQVKAAKAFCDENGLEMADPREYLFFDKGRSAFKGKHL 60 Query: 58 AQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDN 117 +G + FL +E I PG+ L+VESLDRLSREKV +A+ R +L GI+V T D Sbjct: 61 DDTGELARFLSYVEDSTIPPGSYLVVESLDRLSREKVRDALPRFLDLLAKGINVYTSVDK 120 Query: 118 TVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRW 177 +Y D NE LI +I+ RA+EES +K RV +W++K++ A +G + P W Sbjct: 121 RLYTKD-YNE-LDLIISIISMSRAHEESAVKGGRVSSAWREKQKAARTTGKPLGKLRPLW 178 Query: 178 LSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAV-------KNFSGKES 230 LD +V +PD+ + IF L + IA LN + KNFSG Sbjct: 179 --LDVTPDGYVLNPDKAAVVRRIFDLSTKGHGSRIIAATLNQEGIPAFSAGRKNFSG--- 233 Query: 231 AWGPSVIEKLLANKALIGICVPSYRARGKGISE---IAGYYPRVISDDLFYAVQEIRLA- 286 WG S + +L ++ +G P GK + I Y+P V+++D FY Q R + Sbjct: 234 LWGFSTVRHILDSRTTLGEYQPHIFTDGKRTPDGDPIKDYFPSVVTEDEFYLAQAARTSR 293 Query: 287 -PFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIK 345 ++ ++ N N+L ++ C CG+ M + G YY C CD I Sbjct: 294 KTHSVTKATTN---FNVLAGILNCYKCGSAMHLQGQRG--RKYYKCSKTTRGLCDAGIIS 348 Query: 346 RDLVDYNIINELLFNCSKIQPVENK----KDANETLELKIIELQMKINNLIVALSVAP-E 400 + + E+L + V++ + + + +E +I L+ + ++ + + P Sbjct: 349 APRTE-QVFKEILTKVDSLSLVQDSSGSLQKSLQIVEGRIASLKARQDDAEASHAEFPSR 407 Query: 401 VTA-----IAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYA-IDLTSKNGRELCRTLA 454 +TA + I L+ E R +++ + L S V S DF+ +DL S GR L Sbjct: 408 ITAKLLHELEADIGALESE--RTAIA-EQLASDKVMSKHDFFEKLDLVSFEGRVAANNLI 464 Query: 455 YKTFEKIIINTDNKTCDIYFMN 476 + I + + +T + Y+++ Sbjct: 465 KRLGLFIFASKNGRTDETYWVS 486 >UniRef50_C9QK00 Site-specific recombinase n=1 Tax=Vibrio orientalis CIP 102891 RepID=C9QK00_VIBOR Length = 514 Score = 173 bits (438), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 122/348 (35%), Positives = 182/348 (52%), Gaps = 21/348 (6%) Query: 4 AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHA-QSGA 62 A +Y RFSS Q GDS+ RQ +L ++ + + L T ++EDLG+SA+ ++ + Sbjct: 3 AYSYRRFSSATQSHGDSIRRQIQLAEDYCHKH-NLELSTDSFEDLGVSAYHSNNSLEDAG 61 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 +F+ A+E G I LLVESLDRLSR + EA+++L I N G+ V+TL DN Y Sbjct: 62 LGQFIAALEEGKIPTPCYLLVESLDRLSRANIDEALQQLLAITNQGVIVVTLFDNQTYKK 121 Query: 123 D-SLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 L E I AI+ RANEESE KS R+K W K+R D + T + P WL L Sbjct: 122 GMGLAE---FITAIVTMARANEESETKSKRLKAVWHKRRTDP---NALKTNNKPFWLDLS 175 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 D +T+F+ + + + + I++L + + I+K+LN + + GK WG +VI K+L Sbjct: 176 DDKTSFILN-ESAELVREIYELSIGGMGSHLISKHLNAKGIPSPKGK--TWGDAVITKVL 232 Query: 242 ANKALIGICVPSYRARGKGI---SEIAGYYPRVISDDLFYAVQ-EIRLAPFGISNSSKNP 297 KA++G P+ R K + I +YP VI++ FY Q +I+ + S + Sbjct: 233 NTKAVLGEYQPNQRVNRKSVPIGEPIQDFYPSVINEQTFYLSQAQIKQRAKSLKRGSTSS 292 Query: 298 MLINLLRTVMKCEACGNTMIVHAVSGSLHGYYV-CPMRRLHRCDRPSI 344 L N+L+ V C C + + S H YY CP CD I Sbjct: 293 HL-NILKDVGTCRRCSAPLRLQKQS---HLYYFRCPESLKGTCDSKPI 336 >UniRef50_A9W3Z8 Recombinase n=1 Tax=Methylobacterium extorquens PA1 RepID=A9W3Z8_METEP Length = 585 Score = 171 bits (433), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 134/451 (29%), Positives = 212/451 (47%), Gaps = 37/451 (8%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 M K +Y+RFS P QM GDSL RQ +W N +++T DLG+SA++G + Sbjct: 11 MPKCYSYIRFSRPEQMRGDSLRRQTEAAEKWAAENGMVIDESLT--DLGVSAYRGLNRLK 68 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 GA +FL+ + G + G+ L++ESLDR SRE + I +L G+ ++TL D VY Sbjct: 69 GALGKFLELVAGGQVPKGSYLIIESLDRFSREDALDVISEFSKVLRSGVTIVTLLDGQVY 128 Query: 121 NIDSLN-EPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 + + + EP +L ++++ RA+EES+ K RV +W+KKR+ A S ++TA P WL Sbjct: 129 SRERIKAEPMALFGSLMVMMRAHEESKTKGKRVGEAWEKKRKSA--SDAVLTARVPGWLQ 186 Query: 180 L--DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVI 237 + D R P + + IF + +A+ L + + F ++ W S + Sbjct: 187 VVEDGGRRRIEFKPHGREVVRRIFADTVNGYGKLKVAQRLKEAGFETFEDGKT-WHGSYV 245 Query: 238 EKLLANKALIGICVPSYR-ARGKGI---SEIAGYYPRVISDDLFYAVQEIRLAPFGISNS 293 +K+L N+A G P R G+ + + GYYP +S+ F A + + Sbjct: 246 QKVLRNRATFGEMQPYKRDEEGRRVPAGPPVKGYYPAAVSEADFMRAS----AALALRDK 301 Query: 294 SKNPM----LINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLV 349 S P NLLR + +C CG M G + VC R D + +R + Sbjct: 302 SGGPREATGEANLLRNLARC-TCGGRMRRENKGGKSSAWLVCA--EASRGDCTNTRRWRL 358 Query: 350 DYNIINELLFNCS------KIQPVENKK-DANETL---ELKIIELQMKINNLIVALSVAP 399 D + E L CS K+ E +K DA T+ E K E+ ++ ++ + + Sbjct: 359 D--LAEEKLLGCSARIDFRKLLAAEGEKMDAPPTVADYEAKAAEVSKRLAAIMAVVEMG- 415 Query: 400 EVTAIAEKIRLLDKELRRASVSLKTLKSKGV 430 VTA A + L KE A L ++ G Sbjct: 416 -VTAYAHRAVELQKESDEAEAELARVRRLGA 445 >UniRef50_A5L3F9 Putative uncharacterized protein n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5L3F9_9GAMM Length = 542 Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 125/409 (30%), Positives = 204/409 (49%), Gaps = 20/409 (4%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 M +A +Y+RFS+P Q GDS RQ E+ + L Y+DLG+S FKG + +S Sbjct: 1 MIRAYSYIRFSTPEQFKGDSFRRQTAQAKEYAD-SKGLLLQDFFYKDLGVSGFKGANLKS 59 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 GA +F + + G + + LL+E+ DR SR +A+ + +L+ GI ++TL D +Y Sbjct: 60 GALGKFKEQVRKGVVPKDSWLLIEAWDRFSRMHPKDALREMLELLSLGITIVTLIDGAIY 119 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 D L+ +L+ +++ RA+EES KS RV+ + KK+R+ A E G T CP W+ L Sbjct: 120 KEDELD-TMNLLVCLMLMSRAHEESATKSKRVESAAKKRREKAREEGARFTKICPLWIEL 178 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 + F + KT+ IFK +E AI++ L + + FS W S +EK+ Sbjct: 179 SEDEKNFSLIESKAKTVRDIFKWSIEGLGRIAISRRLVEQGIAPFSKTARTWHTSYVEKI 238 Query: 241 LANKALIGICVPSYRARGKGISE---IAGYYPRVISDDLFYAVQ----EIRLAPFGISNS 293 L N A G + K + + I Y+P I D F A Q E R++P + Sbjct: 239 LKNPAAYGAIQFHTGSGTKRVPDGEPIENYFPAAIDKDTFLAAQYKSSERRISPNKTTYR 298 Query: 294 SKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVC-PMRRLHRCDRPSIKRDLVDYN 352 K + LL C +CG+ M+ + +G YY C ++ C R + K+ D Sbjct: 299 GKAKLFSELLY----C-SCGDKMM-YVNNGRGLVYYKCFNVKEKRGCTRRNFKQGNTDEL 352 Query: 353 IINELLFNCSKIQPVENKKDANETLELKIIELQM-KINNLIVALSVAPE 400 +++ L S++ + ++ + ++EL I+ Q+ ++ N I SVA E Sbjct: 353 LVSALFQFGSRLLAKDTQEAYDFSVELSSIKGQLEEVQNKI---SVAVE 398 >UniRef50_Q2BR60 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BR60_9GAMM Length = 544 Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 140/484 (28%), Positives = 218/484 (45%), Gaps = 50/484 (10%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 KA +Y+RFS Q GDSL RQ I + N + L T T+EDLG+SA+KG +A +GA Sbjct: 2 KAYSYIRFSKQSQAQGDSLRRQTEAIRSYCTKN-NLTLSTQTFEDLGISAWKGANADTGA 60 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F+ E G I +LLVE+LDRLSRE V +A L +L+ + +ITL D VY+ Sbjct: 61 LGAFIKGCESGAIQTPCSLLVENLDRLSREHVRKAFGLLLQLLDLDVTIITLMDEKVYSP 120 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 D + L+ A+ R EES+ KS RV+ + + KR+ L T +CP+WL L+ Sbjct: 121 DC--DQMDLMVALTYMSRGAEESQTKSDRVRKAKQAKREKTLAGEVKFTGNCPKWLKLNK 178 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNF----------------S 226 F P+ V+T++ I+ +R + + I K LN+ ++ F + Sbjct: 179 DTQTFEEIPEFVETLKRIYDMRSKGYGIVKILKTLNEEGIRAFGLKIVKDENGEPVKDKT 238 Query: 227 GK----ESAWGPSVIEKLLANKALIGICVPSYRARGKGI---SEIAGYYPRVISDDLFYA 279 GK S W + + L ++A+IG Y+ + +G+ I Y+P VI +LFY Sbjct: 239 GKVKKVPSKWSQTTVVNYLKSRAVIG----EYQLKERGVPVGDPITDYFPTVIDPELFYR 294 Query: 280 VQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAV---SGSLHG---YYVC-- 331 VQ+ F + N L ++ C CG + V G H Y C Sbjct: 295 VQDT----FTKVTKGRTTTFRNALTGLLSCHVCGGPIKFDHVPPKKGRKHAPNQYLRCKS 350 Query: 332 PMRRLHRCDRPSIKRDLVDYNIINELLF-NCSKIQPVENKKDANETLELKI--IELQMKI 388 R C + I V ++I + N +KI + + + EL+ I+ + K+ Sbjct: 351 TYERKTTCFKGMINYSGVLSSVIAMTAYLNFNKINSEDYEALTAKLAELETNRIDTEAKL 410 Query: 389 NNLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSK-----GVNSFSDFYAIDLTS 443 NNL + + L L + + K+K + ++DL S Sbjct: 411 NNLSAVIQAGVTAPNFVKDANRLSSSLDEIKTDIDSTKAKLSSVEPSEAMKSIDSLDLES 470 Query: 444 KNGR 447 + GR Sbjct: 471 EQGR 474 >UniRef50_Q0F1R0 Recombinase n=2 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F1R0_9PROT Length = 491 Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 93/269 (34%), Positives = 152/269 (56%), Gaps = 5/269 (1%) Query: 50 LSAFKGKHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGI 109 +SA+KGK+A GA +F+ +E G++ G+ L++ESLDRLSR++V A+ +L+ G+ Sbjct: 1 MSAYKGKNATEGALKDFIKLVEDGHVDKGSILILESLDRLSRQQVFTALGLFSSLLSAGV 60 Query: 110 DVITLCDNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTI 169 +++TL D Y +S+N+ L+ +++ R++EES +KS R+ SW+ KR+ A+E Sbjct: 61 EIVTLADGQHYTSESINDVGQLMFSLISMSRSHEESAVKSKRISASWENKRKLAVEFKRP 120 Query: 170 MTASCPRWLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKE 229 MT CP+WL + R+ F R K I IF + IA LN+ V F+G + Sbjct: 121 MTNQCPKWLRISKDRSCFKVIEARAKVIRCIFDQSIAGTGQRKIAAGLNERGVSTFNGGD 180 Query: 230 SAWGPSVIEKLLANKALIGICVPSYRARGKGISE-IAGYYPRVISDDLFYAVQEIRLAPF 288 W S I K++ +K++IG P + +G+ I E I GYYP ++S+ +F Q R++ Sbjct: 181 -MWHSSYIAKIIRSKSVIGEYQP--KQKGEPIGESIPGYYPAIVSEGIFDKAQAARVSRI 237 Query: 289 GISNSS-KNPMLINLLRTVMKCEACGNTM 316 S++ K NL + KC C +T Sbjct: 238 NPSSAGRKGEKFSNLFSGMCKCLECHSTF 266 >UniRef50_A6D403 Resolvase-like:Recombinase protein n=1 Tax=Vibrio shilonii AK1 RepID=A6D403_9VIBR Length = 548 Score = 165 bits (418), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 131/441 (29%), Positives = 218/441 (49%), Gaps = 41/441 (9%) Query: 5 IAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFS 64 I Y+RFSS Q G SL RQ I E+ + N +++ DLGLSA+ KH + G+ Sbjct: 6 IPYVRFSSAEQRKGHSLKRQIERIEEYARKNGYTVDNSLNLRDLGLSAYTAKHIEKGSLG 65 Query: 65 EFLDAIEHGYILPGTT--LLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 FL+AIE I + L +E DRLSR+ V +A IL +++ITL D VY Sbjct: 66 VFLEAIEANLIPRDGSIYLCIEQFDRLSRQNVDDAYGLFSKILKSNVNIITLMDEKVYTK 125 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTAS-CPRWL-SL 180 DSL E S+I ++L+ Q+AN ESE KS RV +K + +D ++ AS P W+ + Sbjct: 126 DSLTEMVSIISSLLLMQQANIESEKKSERVLAVFKDRLKDLQGGNKVVFASMLPGWIENT 185 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHA--------VKNFSGKESAW 232 K++ ++V+T+ +F+L +E +++ IA+ LND KNF+ ++W Sbjct: 186 GTKKSPHFVFNEKVETVREVFRLYIEGKTMGQIARLLNDRKTLQIARKRTKNFT---NSW 242 Query: 233 GPSVIEKLLANKALIGICVPSYRARGKGISEI-AGYYPRVISDDLFYAVQEIRLAPFGIS 291 I LL+N+ +IG + + K E+ YYP IS D + VQ ++ + Sbjct: 243 NSGKISHLLSNQCVIG------QLKIKKSGEVFEDYYPSAISLDDWDVVQSMKRTTATVK 296 Query: 292 NSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSL----HGYYV--CPMRRLHRCDRPSIK 345 + IN+ + + C CGN + + + Y++ C RR H CD +I+ Sbjct: 297 AGGRKS--INIFQGRLFCADCGNKYYFETDTQTTKTKEYRYHLLKCSGRRFHSCDSKTIR 354 Query: 346 RD---LVDYNIINELLFNCSKIQPVENKKDANETLELKIIELQ---MKINNL-----IVA 394 D +D+ I + + V + K+ N+ + ++ EL+ +++N++ I Sbjct: 355 YDDLLEMDHLFIKKHSEKNNDQSLVNDLKEKNKNINKQLRELEKENLELNSMFESGEIST 414 Query: 395 LSVAPEVTAIAEKIRLLDKEL 415 ++ A T KI +L ++L Sbjct: 415 IAFAKASTVTNNKIDVLKRDL 435 >UniRef50_Q46W15 Recombinase n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46W15_RALEJ Length = 589 Score = 164 bits (415), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 137/478 (28%), Positives = 225/478 (47%), Gaps = 34/478 (7%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKV-------NSDYYLDTITYEDLGLSAF 53 M +A Y RFS P Q G S RQ L ++ +V +S+Y T+ D G SAF Sbjct: 1 MPRAYNYTRFSHPSQALGQSEQRQIELCEQYCRVHGLTLVRDSEY-----TFLDRGRSAF 55 Query: 54 KGKHAQSGA-FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVI 112 G H GA S FL +E G I G+ L+ ESLDRLSR+ A++ L I+ GI V+ Sbjct: 56 LGAHLDDGAELSRFLKLVEDGTIPAGSWLICESLDRLSRQDSWTAMKLLGGIVESGITVV 115 Query: 113 TLCDNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTA 172 TL + V+ + + LI A+L + RAN ES KSSR++ +++KKR A + + T Sbjct: 116 TLNNGEVFA--DMKDARKLIMAVLDSSRANSESSHKSSRLRQAYQKKRDAASDGKAVFTK 173 Query: 173 SCPRWLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAW 232 P WL L R+ + P+ V+T+ +IF L + N +A+ LN+ F + W Sbjct: 174 QVPMWLKLKADRSGYDLVPEFVETVRMIFDLTIT-HGKNKVAQLLNEAGRPTFKPSVNGW 232 Query: 233 GPSVIEKLLANKALIGICVP------SYRARGKGISE-IAGYYPRVISDDLFYAVQEIRL 285 G S + +L N+A++G P R + K + E I Y+P +I + +Y Q+ + Sbjct: 233 GTSAVSHVLNNRAVLGEFQPMSKLDDPKRRKRKPVGEPIKKYFPAIIDETTYYRAQDA-V 291 Query: 286 APFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHG--YYVCPMRRLHRCDRPS 343 A + ++K + N+ + V +C CG+ M + + G Y C + R C+ Sbjct: 292 AGRRTAKATKQSVKFNVWQKVARCIHCGSPMHMVNKGRAPKGQTYIECSIGRKGLCESHK 351 Query: 344 IKRDLVDYNIINELLFNCSKIQPVENK--KDANE--TLELKIIELQMKINNLIVALSV-- 397 + R + +L + V + K A + + +I E + K++ + A Sbjct: 352 LIRLDHSEQVFRAILACLDSMSLVRDSGGKLAKDLAAINGRIAEQEAKLSKAVAAFDAEP 411 Query: 398 APEVTAIAEKIRLLDKEL-RRASVSLKTLKSKGVNSFSDFY-AIDLTSKNGRELCRTL 453 +P++ A ++R EL + + L ++ + +F +DL S GR L Sbjct: 412 SPDIAAAVRRMRETLTELTNQREHTQGELAAEDAIDYKEFMRRLDLESPEGRAAANAL 469 >UniRef50_Q0G2L1 Putative uncharacterized protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G2L1_9RHIZ Length = 477 Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 135/419 (32%), Positives = 202/419 (48%), Gaps = 40/419 (9%) Query: 44 TYEDLGLSAFKGKHA-QSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLK 102 T D G SAF+G+ A F+ ++ G + G+ LLVESLDRLSREKV A+ Sbjct: 18 TLRDEGRSAFRGRQRLDDAALGSFIAKVDRGDVPTGSYLLVESLDRLSREKVLVALRLFL 77 Query: 103 LILNHGIDVITLCDNTVYNIDSLNE-PYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQ 161 +L+ GI ++TL D +Y+ DS+ E P+ L+ +I+I RA+EES IK+ RV +W +KRQ Sbjct: 78 TLLDRGIIIVTLGDGRLYSSDSVGERPFELMISIVIMMRAHEESSIKAKRVGAAWDRKRQ 137 Query: 162 DALESGTIMTASCPRWLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHA 221 AL MT CP WL D + +R + IF + ++ AIA LN Sbjct: 138 LALTERKAMTRVCPAWLEKDADGYRLI--AERATVVRRIFAMSIDGMGSRAIAIALNSEK 195 Query: 222 VKNFSGKESAWGPSVIEKLLANKALIGICVPSYRAR-GKGISEIAGYYPRVISDDLFYAV 280 V F G+ W S ++KLL N+A IG VP +R + Y+P V+ + FY Sbjct: 196 VPVF-GRGRYWHDSYVKKLLGNEATIGRFVPGAASRIAPAYQPVDDYFPAVVDERTFY-- 252 Query: 281 QEIRLAPFGISNSSKNPM--LINLLRTVMKCEACGNTMIVHAVSGSLHGYYV--CPMRRL 336 + + S+S ++P + NL+ + C CG M H ++ G V C RL Sbjct: 253 RSLAATRARASSSVRHPAGKVRNLVSGIAFCSECGGGM--HYMNKGRRGMTVLQCGSSRL 310 Query: 337 HRCDRPSIKRDLVDYNII-NELLFNCSKIQPVENKKDANETL-ELKIIELQMKINNLIVA 394 S K DYN++ N L+ CS E +D +E + E + EL ++ +NL Sbjct: 311 KGGCSNSFK---YDYNMLENGLVILCS-----EAFQDRSEKIPEADLGELMVQRDNLAER 362 Query: 395 LSVAPEVTAIAE--------KIRLLDKELRRASVSLKTLKSKG--------VNSFSDFY 437 LS E+ E +I L+ +L+ A +K+ K +F DF+ Sbjct: 363 LSRLIELVETGELAGQQVPRRIADLEAQLKSADAVIKSKKQAAKLLESENSEKAFDDFF 421 >UniRef50_Q2BRM1 Site-specific recombinase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BRM1_9GAMM Length = 618 Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 131/452 (28%), Positives = 222/452 (49%), Gaps = 36/452 (7%) Query: 4 AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAF 63 A+ Y+R+SS Q GDS RQ LI + K N+ ++++ +D +SA+ G + +SG Sbjct: 38 AVYYIRYSSMQQEDGDSERRQLHLIEMYAKANNLRIDESLSAKDRSVSAYHGANMKSG-M 96 Query: 64 SEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNID 123 + L+ I+ G + G LL+E+LDR SR+ + ++ L I+++GI+V+T+ D +++ D Sbjct: 97 GDILNHIKEGRLQDGDYLLLENLDRFSRDHILQSAPTLFQIISNGINVVTVSDGQLFSKD 156 Query: 124 SLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGT---IMTASCPRWLSL 180 +++++I+ RA++ES+ KS R K W KR+ A++ G IMT+ P WL Sbjct: 157 G-TALMTMMQSIMQLSRAHDESKAKSDRGKAVWDAKRE-AIKVGNSNKIMTSVSPNWLKP 214 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 + +T FV +R ++ IF L + +I K LN + F G+ W S I+K+ Sbjct: 215 NKDKTEFVIHEERANIVKRIFDLSDQGIGSVSITKILNGENIPTF-GRAEFWQKSAIDKI 273 Query: 241 LANKALIGICV---------PSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGIS 291 L ++A++G C R GI + YYP+VIS+ LF VQ R + Sbjct: 274 LNSRAVLGECEFYTGQVLENGKKRRVSTGIV-VKDYYPKVISEALFDRVQMKRKSRVTGG 332 Query: 292 NSSKNPMLINLLRTVMKCEACGNTM--IVHAVSGSLHGYYVCPMRRLH----RCDRPSIK 345 K + NL ++KC C +TM I Y C R H RC + + Sbjct: 333 GGRKGSLFSNLFTGIVKCGECNSTMQFINKGKRPKGRTYLKC---RGHEHGTRCKGVNWR 389 Query: 346 RDLVDYNIIN--------ELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSV 397 D V+ +IIN +LL ++ + ++ + +E ++E+ KI+ L+ L Sbjct: 390 YDKVESHIINLMQHLPIQDLLPQEAQETQLMQQEKEVQAMENSVMEINSKISKLLDILDD 449 Query: 398 APE--VTAIAEKIRLLDKELRRASVSLKTLKS 427 + +I E++ +L L LKS Sbjct: 450 CDNSAIKSITERVSTYQNKLDAEQHKLSALKS 481 >UniRef50_B0T614 Recombinase n=1 Tax=Caulobacter sp. K31 RepID=B0T614_CAUSK Length = 571 Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 111/341 (32%), Positives = 168/341 (49%), Gaps = 23/341 (6%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 KA +Y RFSS Q GDSL RQ + +W + LDT + DLG+SA+ G H GA Sbjct: 4 KAYSYARFSSKAQAEGDSLRRQLKAAFDWADKHG-LQLDT-RHRDLGVSAYTGAHRVKGA 61 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 + F+ ++E G I G+ LLV+S+DRLSRE E + L + +GI V+ L +N V + Sbjct: 62 LASFIRSVEDGEITRGSYLLVDSMDRLSRESETEVLHLLLTLTRNGIKVVNLAENHV--L 119 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWL---- 178 D E I+ ++ A R+N ES K +V L + ++ A E G + +AS P WL Sbjct: 120 DEKAEFTDYIRVLIHASRSNAESVEKGRKVGLKRAENKRLAREEGKVWSASGPGWLEAIV 179 Query: 179 --SLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSV 236 + ++ + +R + ++++F AI + LND K+F + W +V Sbjct: 180 TGTKPNRHIEWKVIKERKQVVQMMFDFAEAGLGTVAITQRLNDEGYKSFR-YDRPWQQTV 238 Query: 237 IEKLLANKALIGICVPSYRARGKGI-------SEIAGYYPRVISDDLFYAVQEI---RLA 286 + +L N+A+IG P + G I+GYYP +I + F+ VQ I R Sbjct: 239 VLDMLRNRAVIGEYQPKFATSGSNSYNRPNDGDPISGYYPEIIKPEQFHRVQAIIGARKP 298 Query: 287 PFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHG 327 G S SK + NL + C CG T+ +H V G Sbjct: 299 KQGRSAGSK--VFNNLFIGLGSCHECGGTVGIHVVKAKAEG 337 >UniRef50_A3SXC7 Hypothetical bacteriophage protein n=1 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3SXC7_9RHOB Length = 504 Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 109/336 (32%), Positives = 170/336 (50%), Gaps = 28/336 (8%) Query: 4 AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAF 63 A +Y+RFSS Q G SL RQ +W N Y L T T+ DLG+SAFKG + G Sbjct: 9 AFSYVRFSSASQAKGGSLARQTDAAQKWADENG-YLLSTTTFRDLGVSAFKGDNTSVGRL 67 Query: 64 SEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNID 123 + FLDAI+ G + G LLVE+LDR+SR+K + L+ I+ G+DV+TL +N Y + Sbjct: 68 AAFLDAIDSGAVPKGAVLLVENLDRISRDKYRKGRNILEGIIEAGVDVVTLSNNKRYTLK 127 Query: 124 SLNE-PYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWL---- 178 L++ + I+ IL RA+EES KS RVK W++ E + +++ P WL Sbjct: 128 DLDDNAMTGIEIILTFVRAHEESLTKSKRVKDGWQRNLAKVREGTRLRSSAVPSWLKLVG 187 Query: 179 SLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIE 238 ++D+ F+ PD+V+ ++ +++ + ++ +IAK + + GK A G I Sbjct: 188 TMDEPSFEFI--PDKVEMVQELYRRFADGETVWSIAKGFRERGIPTLRGKTFASGN--IY 243 Query: 239 KLLANKALIGIC-VPSYRARGKGISE-IAGYYPRVISDDLFYAVQEIRLAPFGISNSSKN 296 +++ +KA GI V + I+E I Y+PR++ +++ R + N KN Sbjct: 244 RVVKSKAPFGILEVGRGTKNNRTITEQIVDYFPRIVDEEI------QRRVSLRLDNMGKN 297 Query: 297 PMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCP 332 K EA G+T G L G P Sbjct: 298 ----------AKPEAKGHTSPKRRTHGILTGVIWSP 323 >UniRef50_Q3KAI6 Putative integrase/recombinase n=1 Tax=Pseudomonas fluorescens Pf0-1 RepID=Q3KAI6_PSEPF Length = 532 Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 135/458 (29%), Positives = 218/458 (47%), Gaps = 51/458 (11%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKH-AQ 59 MK+AI+Y+RFSS Q G S+ RQ +IA+WLK + DY + + + DLG S + G+H + Sbjct: 1 MKQAISYVRFSSDRQRHGSSVERQEGMIADWLKRHPDYEMSDLKFSDLGKSGYHGEHIKE 60 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILN----HGIDVITLC 115 +G F + L A+E G+I G +LVE++DR R E ++ L L++N G+ +ITL Sbjct: 61 AGGFGKLLKALEDGFIRAGDVVLVEAIDRTGRL---EPMDMLTLVINPILKAGVSIITLD 117 Query: 116 DNTVYNIDSLN--EPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTAS 173 DNT Y+ +S+N + + L+ I Q A+ S S+RV S+KK+R+DA + G + Sbjct: 118 DNTTYSKESVNTAQIFLLVAKI---QAAHGYSAALSTRVADSYKKRRKDAAKYGIVPRRI 174 Query: 174 CPRWLSLDDK-RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAW 232 P WL+ D R P I+ F+L + + IAK + + V+ + A Sbjct: 175 TPVWLNPDGTVREDVAP------WIKTAFELYVSGVGKSTIAKRMRESGVERLA---KAS 225 Query: 233 GPSVIEKLLANKALIGIC-----VPSYRARGKGISEIAGYYPRVISDDLFYAVQ---EIR 284 GP V E L NKA+IG P ++ I YP +I LFY Q E Sbjct: 226 GPGV-EGWLRNKAVIGKWETLEGTPDHQI-------IDDIYPAIIEPSLFYKAQVHAEKM 277 Query: 285 LAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRC-DRPS 343 I +S L+ L+R C CG IV + G H + + C + Sbjct: 278 KTQRPIKTASH--FLVGLVR----CGECGKNYIVQNLHGKPHSMRCRTRQSQNECTNSHC 331 Query: 344 IKRDLVD----YNIINELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAP 399 + + ++D Y + + + Q N K+ T E +++ + +++ L+ AL+ Sbjct: 332 VPKPVLDAIYRYTSVTAAIEAVQQQQMGVNDKEIV-TREAELLAITKRVDGLVQALTQTG 390 Query: 400 EVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFY 437 + + E ++ E A +L L+S V S + Sbjct: 391 PIPEVIEALKQSRIEREAAESALVILRSTVVPSAGTHW 428 >UniRef50_B9XI16 Resolvase domain protein n=1 Tax=bacterium Ellin514 RepID=B9XI16_9BACT Length = 540 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 128/446 (28%), Positives = 215/446 (48%), Gaps = 33/446 (7%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 +KAI+Y+RFSS Q G SL RQ + ++ + +++T +DLGLSAF+GK+A SG Sbjct: 13 RKAISYIRFSSLKQEEGFSLARQLEGTKGFCSRHNLFLDESLTVKDLGLSAFRGKNADSG 72 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 FL A+ I GT L+VE+LDRL+R + EA L IL GIDV + ++ VY+ Sbjct: 73 NLGVFLAAVRENKIPKGTVLVVEALDRLTRNNIVEASHLLTDILRQGIDVGLVTEDKVYS 132 Query: 122 IDSLNE-PYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 D +N+ P+ I A R +ES +KS R+K +W +K++ +E+ + P WL Sbjct: 133 YDYINKNPFEFIVATTYLIRGGDESRMKSERIKDAWSRKKRCIVETKEAVKIPAPCWLKR 192 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRM-ERRSLNAIAKYLNDHAV---KNFSGKESAWGPSV 236 + ++ + + + K ++ IF + E + +++ +N V N + S W Sbjct: 193 EGQKWSVI--SKKAKVVKEIFAAYLKESLGIWRLSQTMNSQKVPVITNGATPASKWHRIT 250 Query: 237 IEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKN 296 + ++L +KA+IG K + Y+P +I FYAVQ +L + Sbjct: 251 LHRILTDKAVIGTYT-------KLDEPVENYFPAIIPQKDFYAVQA-KLQERRHYRGRHS 302 Query: 297 PMLINLLRTVMKCEACGNTMI-------VHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLV 349 ++LL+ + KC CG+TM + L+ Y C L C +P+ DL Sbjct: 303 LKDVSLLKGICKCGKCGSTMTRITRTRKIKGGGSKLYRYLYCHNSILGLC-KPATSVDLN 361 Query: 350 DYN-IINELLFNCSKIQPV--ENKKDANETLELKIIELQM-----KINNLIVALS--VAP 399 + I +F E K D + EL+ I+ Q+ + + LI + A Sbjct: 362 ELERIFLHYMFTSETALTFLSECKADDSIQTELRTIDGQIEDKAARRDRLIAVIESDAAA 421 Query: 400 EVTAIAEKIRLLDKELRRASVSLKTL 425 +++ E+I L++E++ V +L Sbjct: 422 TPSSVLERIASLEQEIKMLRVKKDSL 447 >UniRef50_A8GC08 Resolvase domain n=1 Tax=Serratia proteamaculans 568 RepID=A8GC08_SERP5 Length = 503 Score = 150 bits (380), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 130/452 (28%), Positives = 227/452 (50%), Gaps = 33/452 (7%) Query: 4 AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFK-GKHAQSGA 62 A +Y+RFSS Q GDSL RQ + E+ + + L + ++DLG+SAF+ GK A + Sbjct: 9 AYSYVRFSSKRQELGDSLRRQTEMAEEY-AIKNGLKLSSKNFQDLGISAFREGKRA---S 64 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 + L AIE G I G+T+++E+LDRLSR + +E +K IL + V++L D + Sbjct: 65 LVDMLAAIEEGQITAGSTIIIEALDRLSRRGIDATLETVKEILRKDVQVVSLSDGLLLTK 124 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 +SLN+ S+I+ + A A++ESE K+ R++ + ++RQ AL SG + P WL + Sbjct: 125 NSLNDLQSVIRIAVAADLAHKESERKAIRLRETKGQQRQAAL-SGKPINKILPFWLQRTE 183 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 AF D+ I +L+ E + N IAK LN + + + W + I K+L Sbjct: 184 TGYAF---SDKAGVARQIVQLKQEGKGSNMIAKALNKLGIAGV--RTAQWNHASITKMLK 238 Query: 243 NKALIGICVPSYRARGKGISE---IAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPML 299 N AL G + + + + + YYP +IS + + +Q + S+ NP Sbjct: 239 NPALYGAYQTGETTKDRELIKLELVEAYYPALISKEEWLLLQSDQSKSKRGRRSADNPY- 297 Query: 300 INLLRTVMKCEACGNTMI--VHAVSGSLHGYYVCPMRRLHRCDRP-SIKR-DLVDYNIIN 355 +++CE CG ++ H V L+ Y+ C + RC + SIK D I+ Sbjct: 298 ----SGLLRCE-CGGALVKRKHTVKEKLYVYHGCLNAKDGRCTQNISIKGLDGALTTILG 352 Query: 356 ELLFNCSKI--QPVENKKDANETLELKIIELQMKINNL-IVALSVAPEVTAIAEKIRLLD 412 L F + Q + ++ + LE +I +L K+ L + LSV + + +++ + Sbjct: 353 RLEFKKKQTLDQSIHQER---QQLEARINDLNSKLQVLDDIPLSVIKSIGTMESRLKEIT 409 Query: 413 KEL---RRASVSLKTLKSKGVNSFSDFYAIDL 441 +++ R ++ +KS+ ++S +D ++L Sbjct: 410 EQIAKDEREQRGIEAVKSEKLSSITDGLELNL 441 >UniRef50_A9APW9 Recombinase n=16 Tax=root RepID=A9APW9_BURM1 Length = 560 Score = 145 bits (366), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 144/525 (27%), Positives = 234/525 (44%), Gaps = 66/525 (12%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLD-TITYEDLGLSAFKGKHAQSG 61 K +Y+RFS P Q +G S +RQ A W D LD T+T D GLSAF +H + G Sbjct: 8 KVYSYLRFSDPKQAAGSSADRQMEYAARW-ATEHDMQLDATLTLRDEGLSAFHQRHIKQG 66 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 A FL AIE G I PG+ L+VE LDRLSR + +A +L I+N GI V+T D YN Sbjct: 67 ALGVFLRAIEDGRIQPGSVLIVEGLDRLSRAEPIQAQAQLAQIINAGITVVTASDGREYN 126 Query: 122 IDSLN-EPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALES---GTIMTASCPRW 177 + L +P L+ ++L+ RA+EES+ KS RVK + +++ + + G I P W Sbjct: 127 RERLKAQPMDLVYSLLVMIRAHEESDTKSKRVKAAIRRQCEGWVAGTWRGIIRNGKDPHW 186 Query: 178 LSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVI 237 + L + F P+RV + + L +E I + L + +N + + Sbjct: 187 VRLGEH-GKFEHVPERVLAVRTMIDLFLEGHGAIEITRRLTE---QNLYVSNAGNYSVHM 242 Query: 238 EKLLANKALIG---ICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSS 294 +++ N+ALIG I V R + GYYP +++ + F +Q+ Sbjct: 243 YRIVRNQALIGEKRISVDGEEFR------LDGYYPPILTREEFAELQQTMSERGRRKGKG 296 Query: 295 KNPMLINLLRTVMKCEACGNTMIVH-----AVSG-SLHGYYVCPMRRLHR-------CDR 341 + P +I L ++ C CG M A G S+ CPM + C+ Sbjct: 297 EIPNIITGL-SITVCGYCGRAMTTQNSKARAPKGKSVVRRLSCPMNSFNEGCPIGGSCES 355 Query: 342 PSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLELKI-------IELQMK--INNLI 392 ++R L+ Y FN S++ ++ A T +L + IE Q++ + L+ Sbjct: 356 EIVERALMRYCSDQ---FNLSRLLEGDDGT-ARRTAQLAVARQRASDIEAQIQRVTDALL 411 Query: 393 VALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSK-------GVNSFSDFYA-----ID 440 AP A + R L+ +L ++ L+ + G+ + ++ +A + Sbjct: 412 SDDGKAP--AAFTRRARELETQLEEQRREIEALEHQIAASSAHGIPAAAEAWAQLVDGVL 469 Query: 441 LTSKNGRELCRTLAYKTFEKIII------NTDNKTCDIYFMNGIV 479 + R R L TF KI++ D+ D + +G + Sbjct: 470 ALDYDARMKARQLVADTFRKIVVYQRGFAPIDDAAADRWKRSGTI 514 >UniRef50_C5TBX4 Resolvase domain protein (Fragment) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TBX4_ACIDE Length = 308 Score = 145 bits (365), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 92/288 (31%), Positives = 148/288 (51%), Gaps = 24/288 (8%) Query: 4 AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAF 63 A +Y+RFS+ Q GDSL RQ + AE L ++Y DLG+SAFK K+ + GA Sbjct: 22 AYSYVRFSTARQELGDSLRRQVEM-AETYCTKHGLDLHPVSYRDLGVSAFKRKNLEKGAL 80 Query: 64 SEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNID 123 + F+DA++ G + G+ L++E DRLSR V A+ L +++ GI ++TL D +++ + Sbjct: 81 AAFIDAVKTGKVPMGSYLVIEQFDRLSRADVDVALRLLLDLVHSGITLVTLVDEKIWDRE 140 Query: 124 SLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGT-IMTASCPRWLSLDD 182 ++ + +LI AI+ RAN ES K++R+ L W +K+ +A G I+T+ CPRWL Sbjct: 141 AIKDVGNLILAIVFMSRANNESTSKATRIGLKWDQKKLNAKTPGARIVTSECPRWLRPTA 200 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHA------------------VKN 224 +T F +R +++ +F +R+ + I ND K Sbjct: 201 DKTGFEIIEERAESVRKVFAMRIGGHGIVGIVSRANDEGWPVPGKKAVRKSGEDKETFKL 260 Query: 225 FSGKESAWGPSVIEKLLANKALIGICVPSYRA----RGKGISEIAGYY 268 S E W S + ++L N+A++G +P R I GYY Sbjct: 261 RSSTEMTWHTSTVGRMLKNRAVLGEYLPHKNGEDGNRIPAAEPILGYY 308 >UniRef50_A6D144 Possible recombinase n=1 Tax=Vibrio shilonii AK1 RepID=A6D144_9VIBR Length = 520 Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 110/329 (33%), Positives = 167/329 (50%), Gaps = 35/329 (10%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 M AI Y+RFSS Q G SL RQ++LI ++LK + L + Y+DLGLS +KGKH ++ Sbjct: 1 MPNAIPYIRFSSSIQQKGSSLERQQKLIDDYLKSRPELTLSNLQYQDLGLSGYKGKHLEN 60 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 + L+A+E G+I G +LVE++DRL R E I L IL HG+ VITL DN Y Sbjct: 61 D-LGKLLEAVESGHIKSGDYILVEAMDRLGRLPELEMIALLHSILKHGVKVITLQDNQEY 119 Query: 121 NIDSLNEPYSLIKAILIA---QRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRW 177 + ++L L+ L+A Q A++ S+ S R+ +W+KKR+ A E G + P W Sbjct: 120 SNEALASNGGLL--YLLAGKVQMAHQHSKQLSQRISAAWEKKRKQA-ELGKGVKRKTPWW 176 Query: 178 LSLDDKRTAF--VPDPDR-VKTIELIFKLR--MERRSLNAIAKYLNDHAVKNFSGKESAW 232 ++ +++ F V D D+ + T + LR ERR I L + K F + Sbjct: 177 ITWNEETECFDTVTDADKQIMTDVFTWYLRGLGERR----ILARLREQFPKKFGTTD--- 229 Query: 233 GPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQ-EIRLAPFGIS 291 P+ +++ NK IG ++I Y IS+ LFY VQ E++ G Sbjct: 230 -PASVKRWFTNKTAIGYW-----------ADIPNVYEAAISEQLFYQVQDELKRRSTG-- 275 Query: 292 NSSKNPMLINLLRTVMKCEACGNTMIVHA 320 + P + L +++C CG + A Sbjct: 276 -KGQTPRSGHYLAGLIQCGECGGNYSMRA 303 >UniRef50_Q3Z3B5 Putative uncharacterized protein n=1 Tax=Shigella sonnei Ss046 RepID=Q3Z3B5_SHISS Length = 414 Score = 141 bits (355), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 98/379 (25%), Positives = 183/379 (48%), Gaps = 33/379 (8%) Query: 131 LIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDKRTAFVPD 190 +IK I+IA+RA++ES +K R+ W K Q A E M P WL L + + ++ D Sbjct: 1 MIKHIIIAERAHQESLVKQKRIAQVWNHKTQLARELKKPMGKQAPGWLELSEDGSYYIVD 60 Query: 191 PDRVKTIELIFKLRMERRSLNAIAKYLNDHA----------VKNFSGKESAWGPSVIEKL 240 D+ + +I+ R+ S+ AI K+LN+ + + W ++ + Sbjct: 61 EDKASLVNIIYDKRLSGMSMFAICKWLNEQGYLTINQRKVRISKTKKPDGNWSALSVKHI 120 Query: 241 LANKALIGICVPSYRARGKGI---SEIAGYYPRVISDDLFYAVQE-IRLAPFGISNSSKN 296 L +++++G + EI G+YP++++D FYAVQ+ + G ++S ++ Sbjct: 121 LTSRSVLGYLPAKISTEDRKTVLREEIEGFYPQIVTDSKFYAVQQLLEETGKGKTSSGEH 180 Query: 297 PMLINLLRTVMKCEACGNTMIVHAVSGSLH-GYYVCPMRRLHRCDRPSIKRDLVDYNIIN 355 + +N+L+ +++C+ CG M + ++ G Y C + RC ++ R L+D + + Sbjct: 181 WLYVNILKGLIRCK-CGLVMTPTGIRKPVYQGTYRCNGNKESRCSYGTVSRKLLDTQLCS 239 Query: 356 ELLFNCSKIQPVENKKDANETLELKIIELQMKINN-------LIVALSVAPEVTAIAEKI 408 L S++ +A +T +L ELQ ++N L L P +T I E + Sbjct: 240 RLFSKLSQLH-----DEATDTAKLD--ELQRRLNTVDGELEKLTETLIQLPNITQIQEAL 292 Query: 409 RLLDKELRRASVSLKTLKS--KGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTD 466 R+ +E V L K+ K V+S D +D+ S GR + + + ++I+++ + Sbjct: 293 RVKQEEKDELIVQLSREKARVKSVSSL-DLSGLDMESVEGRTEAQIIIKRLVKEIVVSGN 351 Query: 467 NKTCDIYFMNGIVFKHYPL 485 K DIY NG + + +PL Sbjct: 352 EKLVDIYLHNGNMIRGFPL 370 >UniRef50_C7CL55 Putative recombinase n=1 Tax=Methylobacterium extorquens DM4 RepID=C7CL55_METED Length = 582 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 105/352 (29%), Positives = 177/352 (50%), Gaps = 32/352 (9%) Query: 4 AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAF 63 ++Y RFS Q +G ++ RQ L+A +L+ N D L + D G+S F+GKHA+ GA Sbjct: 11 GVSYARFSHRKQAAGSTIERQEELLARFLQENPDITLHE-QFSDKGVSGFRGKHAKDGAL 69 Query: 64 SEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV-YNI 122 S L+AI+ G + L++ES+DRLSRE + +A +R +L G+ V +CD + + Sbjct: 70 SRLLEAIKVGRLPTPLVLIIESVDRLSREPMMDAWDRFNTLLKAGVTV-AVCDMRLEIDR 128 Query: 123 DSLNEP----YSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDAL-ESGTIMTASCPRW 177 ++L++ +SLI A+ +RA+ ES KS+ + W K + A I P W Sbjct: 129 EALSKQSWKLHSLINAM---ERAHGESARKSTLITGGWNKSIKAAYARKSAIKGYVGPPW 185 Query: 178 LSLDDKRTAFV-PDPDR--VKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGK------ 228 ++LD++ +V + +R V+T+ IF E + + IAK LN+ V F Sbjct: 186 VTLDEETLRYVITEKNRPTVQTVRRIFDWAAEGATAHGIAKRLNEQQVPLFRAHVAKDHV 245 Query: 229 ESAWGPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPF 288 W I ++L N+ ++G +R RG + I GY+ +IS +LF+ Q+ + Sbjct: 246 RQGWYQGYITEILKNRQVLG----EHRYRGGEV--IEGYFEPIISPELFFRAQQNLVRRP 299 Query: 289 GISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHG-----YYVCPMRR 335 G++ + L NL + C G+ + S + +G Y +C R+ Sbjct: 300 GVAG-RRGQTLSNLFTGLAFCTCGGHMEMTRNRSATENGPEPIKYLMCSNRK 350 >UniRef50_A7MFZ6 Putative uncharacterized protein n=1 Tax=Cronobacter sakazakii ATCC BAA-894 RepID=A7MFZ6_ENTS8 Length = 600 Score = 131 bits (329), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 130/464 (28%), Positives = 214/464 (46%), Gaps = 51/464 (10%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHA-QS 60 +K +Y R+SS Q G + RQ + E+ + N L+ D G+S FK ++ +S Sbjct: 3 QKLYSYQRWSSALQADGTTKARQTKAAEEYAQRNG---LEIEEIVDAGVSGFKSANSDES 59 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 GA +FL A++ G I L VESLDR++R+++ A+E IL GI ++T DN VY Sbjct: 60 GALGQFLRAVDEGLIARNAVLFVESLDRITRDEIDTALELFLGILRRGITIVTGMDNKVY 119 Query: 121 NIDSL-NEPYSLIKAILIAQRANEESEIKSSRVKLSW----KKKRQDALESGTIMTASCP 175 +++ P L+ +IL+ RA+EES+ K +R + + + L S P Sbjct: 120 TREAIKGNPVDLLTSILMFSRAHEESKTKQNRTNGNALALIDRFIKQGLPVNIKSVGSHP 179 Query: 176 RWLSLDDKRT---AFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAW 232 W +DD + A P P +L ME S+ + + LND + GK AW Sbjct: 180 WW--IDDSGSMYEAVKPHPVLWACAQLAMDKFMEGISVFKVTQMLNDRFPHYYKGK--AW 235 Query: 233 GPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIR-----LAP 287 + + KL NKA+ G+ S G + YYP +IS+ F +Q+IR + Sbjct: 236 AMANVRKLRLNKAVYGVREISV---GGKTYVLTDYYPALISEGQFLRLQQIRTTTKYIGK 292 Query: 288 FG----ISNSSKNPML------INLLR--TVMKCEACGNTMIVHAVSGSLHGYYVCPMRR 335 G +++S N + INLL + +C CG TM+ ++ Y+C R Sbjct: 293 VGEGRVVTDSEGNSKVIAERNNINLLSGMKLFRCGHCGGTMMAMRHGDTIR--YLCEKGR 350 Query: 336 --LHRCDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLELKIIELQMKIN---- 389 H C S+ LV++ ++ L+ + I+ + + A +I ++ IN Sbjct: 351 GYHHDCKTWSLPGILVEHTLM--LVTTIAYIELQQKGQGAKADYTQQINAMESTINGYST 408 Query: 390 --NLIVALSVA---PEVTAIAEKIRLLDKELRRASVSLKTLKSK 428 N L++A +V +AE I+ L + A + L+ L+ K Sbjct: 409 QINKATKLAIALDDVDVDELAETIKELKAKRDNAIIELEVLQRK 452 >UniRef50_C1D595 Recombinase n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D595_LARHH Length = 333 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 103/330 (31%), Positives = 158/330 (47%), Gaps = 25/330 (7%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDT-ITYEDLGLSAFKGKHAQ 59 M K +Y RFS Q +GDS+ RQ+ EW + Y +DT + +D G SAF G + + Sbjct: 1 MPKVYSYKRFSHVAQATGDSIRRQKDKTQEWADKHG-YVIDTELQLDDRGKSAFDGTNLR 59 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 +GA +FL G I G+ L +E DRL+R + +A L ++ GI V+T+ D + Sbjct: 60 TGALGQFLTLAREGKIEKGSILAIEVFDRLTRAEPMDAFNLLNDLVQCGISVVTVSDGRL 119 Query: 120 YNIDSLNEPYS-LIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWL 178 Y+ +LN + L+ A ++ R +EES KS ++ + K+R E + + P WL Sbjct: 120 YDSKTLNRDLTALMMAAVMLVRGHEESRRKSEMLQGHYAKRRA---EEASKIGHVPPGWL 176 Query: 179 SLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLN-DHAVKNFSGKESAWGPSVI 237 V P+ T+ IF+L + IA+ N + V K W PS + Sbjct: 177 RPTANGWELV--PEHAATVMEIFELAAKGIGATVIARRFNTEKRVVPSRRKSKGWYPSRV 234 Query: 238 EKLLANKALIGICVPSYRA-RGKGIS------EIAGYYPRVISDDLFYAVQEI--RLAPF 288 KLL K++IG Y+A G+ I YYP I+++LF+ VQ + + AP Sbjct: 235 SKLLRAKSVIG----EYQAFVMDGVKMIPVGPPIPNYYPAAITEELFWKVQSLLSQRAPK 290 Query: 289 GISNSSKNPMLINLLRTVMKCEACGNTMIV 318 G N L ++KCE CG T + Sbjct: 291 GRRTDGG---YRNFLAGMLKCEYCGGTFTL 317 >UniRef50_Q02Q54 Possible recombinase n=1 Tax=Pseudomonas aeruginosa UCBPP-PA14 RepID=Q02Q54_PSEAB Length = 525 Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 96/313 (30%), Positives = 150/313 (47%), Gaps = 27/313 (8%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 M A +Y+RFSS Q G S +RQR ++ +WL+ + + L + +EDLG S F G+H Sbjct: 1 MPSAFSYVRFSSGKQAKGSSEHRQRAMLGQWLEQHPSFTLSDLRFEDLGRSGFSGEHLDH 60 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 G + L AI+ G I G +LVE++DR+ R + E + I+ G+ VITL D VY Sbjct: 61 G-LGQLLAAIDSGAIKSGDVILVEAVDRIGRLEPLEMLPLFSRIVKAGVSVITLEDGHVY 119 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 + S+NE SL + Q+A+E S S R+ S+ +R+ A ++G + P WL+ Sbjct: 120 DRSSVNE-TSLFLLVAKIQQAHEYSNRLSRRINASYTARREKA-KAGLGIKRETPVWLTT 177 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 D + V P + + ERR I + L + ++ FS + + + + Sbjct: 178 DGQLVPHVA-PHIAQAFQDYADGLGERR----ICRKLRESGLEEFSKTNA----TTVRRW 228 Query: 241 LANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLI 300 L NK IG ++I YP V+ LFY VQ+ AP + Sbjct: 229 LKNKTAIGYW-----------NDIPDVYPHVVDPALFYRVQQRLDAP----KVDRAKPSA 273 Query: 301 NLLRTVMKCEACG 313 + L ++KC CG Sbjct: 274 HYLTGLVKCAVCG 286 >UniRef50_UPI0001A445A7 hypothetical protein PcarcW_00494 n=1 Tax=Pectobacterium carotovorum subsp. carotovorum WPP14 RepID=UPI0001A445A7 Length = 584 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 125/430 (29%), Positives = 212/430 (49%), Gaps = 40/430 (9%) Query: 6 AYMRFSSPGQMSGDSLNRQRRLIA---EWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 +Y+R+SS Q +G +L+RQ A E+ +N L+ + D G+SAF+GK+ +SG Sbjct: 6 SYIRWSSDRQATGTTLDRQMASAASAKEFALLNG---LELVEIIDPGVSAFRGKNTKSGK 62 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 +F+DA++ I + L VE+LDRL+R+ V A + +L+ G+ ++T D VY + Sbjct: 63 LGDFIDAVKERIIPDDSWLYVENLDRLTRQDVTTAQKLFIELLDLGLTLLTGMDKRVYTL 122 Query: 123 DSLNE-PYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASC---PRWL 178 +S+N+ P L+ +IL+ RANEES+ K +R + + + + + SC P W Sbjct: 123 ESVNQNPTDLMISILMFSRANEESKTKQARTVGNVETLVERHKQGLPVNIKSCGKHPFW- 181 Query: 179 SLDD---KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPS 235 +DD + A P+ K ++ + + +YL++ +GKE W Sbjct: 182 -IDDTGSQYEAVRQHPEYWKVAREAIDQFLQGHGIYKVKRYLDEKYPNGLNGKE--WDYQ 238 Query: 236 VIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDL-FYAVQEIRLAPFGISNSS 294 V+++L N+ALIG G ++ GYYP + +D++ F +QE++ S Sbjct: 239 VLKRLRENRALIGERTIKI---GNREHKLIGYYPSLCTDEVEFLKLQELKEQNGYKSKKD 295 Query: 295 KNPMLINLLR--TVMKCEACGNTMIVHAVSGSLHGYYVC-PMRRLHR-CDRPSIKRDLVD 350 K INLL T+M+C CG TM G Y+C R L + C S+ LVD Sbjct: 296 KPSDSINLLSGLTLMRCSKCGGTMTGFLNRGKPR--YICLNGRHLQKGCVGWSVTSPLVD 353 Query: 351 YNIINELLFNCSKIQPVENKKDANETLEL-KIIE--------LQMKINNLIVALSVAPEV 401 +I LL N+K+ +T EL K+IE + I N+ +A+ + Sbjct: 354 QCVITTLLIGYINT----NRKEGQDTTELTKLIERKSNDINAINSSIANITLAIEKGANI 409 Query: 402 TAIAEKIRLL 411 + +++++L Sbjct: 410 DQLIDRLKVL 419 >UniRef50_B5S6I4 Putative site-specific recombinase (Partial sequence n terminus) protein n=1 Tax=Ralstonia solanacearum RepID=B5S6I4_RALSO Length = 331 Score = 121 bits (303), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 67/181 (37%), Positives = 106/181 (58%), Gaps = 1/181 (0%) Query: 43 ITYEDLGLSAFKGKHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLK 102 + DLG+SAF G + + GA +F+ AI+ G + P + LLVESLDRLSR V EA+ + Sbjct: 1 MNVRDLGVSAFTGSNIERGALGQFVAAIDEGRVQPDSYLLVESLDRLSRLPVTEALAVFQ 60 Query: 103 LILNHGIDVITLCDNTVYNIDSLNEPYS-LIKAILIAQRANEESEIKSSRVKLSWKKKRQ 161 I+N GI ++TL D+ VY+ D L ++ L+ A++ RA+EES +KS R+K +++ +++ Sbjct: 61 SIINRGITIVTLVDSAVYSKDRLRNDWTPLLIALVSMSRAHEESAVKSRRIKAAYEARKK 120 Query: 162 DALESGTIMTASCPRWLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHA 221 + + + CP WL L D +T + + TI L+F L + IAK LN Sbjct: 121 RVIANKEMKIGRCPWWLKLSDDKTKYEVIEESAATIRLMFDLAKDGMGNALIAKELNARG 180 Query: 222 V 222 + Sbjct: 181 I 181 >UniRef50_Q883N3 Conserved domain protein n=1 Tax=Pseudomonas syringae pv. tomato RepID=Q883N3_PSESM Length = 534 Score = 120 bits (302), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 103/328 (31%), Positives = 155/328 (47%), Gaps = 36/328 (10%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTIT-YEDLGLSAFKGKHAQS 60 K A +Y+RFSS Q GDSL RQ ++A WL N +Y L T Y+DLG S F G H + Sbjct: 3 KLAFSYVRFSSLKQRHGDSLKRQTDMVANWLLANPEYKLSGETSYQDLGKSGFSGAHLDN 62 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 AF L AIE+G I G+ +L+E +DR R + E + L I+N G+D++TL D Y Sbjct: 63 -AFGRLLAAIENGAIPKGSAILIEQIDRAGRMEPMEMLPLLSRIVNAGVDLVTLDDGITY 121 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWL-- 178 + S+N + L + Q+A++ S+ S R++ +++ KR A +G T P W+ Sbjct: 122 DRASVNSNH-LFLLVAKVQQAHQYSDSLSRRLRAAYQTKRAKA-AAGEGATRRMPLWIRD 179 Query: 179 -SLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVI 237 L D FV + E ERR L + D + PS Sbjct: 180 GKLRDDIAPFV-----TQVFEDYAAGIGERRILGRLKGQHPDFETIS---------PSTF 225 Query: 238 EKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNP 297 + L N +G R I ++ +P V+S +L++ VQ+ RL G+ + + Sbjct: 226 RRWLRNPVAVG--------RWNDIEDV---WPAVVSKELWFRVQK-RLTD-GVKPKAASS 272 Query: 298 MLINLLRTVMKCEACGNTMIVHAVSGSL 325 LL ++KC CG V G+L Sbjct: 273 KY--LLSGLVKCARCGKNYCVGGQKGAL 298 >UniRef50_Q489L6 Putative site-specific recombinase n=1 Tax=Colwellia psychrerythraea 34H RepID=Q489L6_COLP3 Length = 681 Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 121/422 (28%), Positives = 184/422 (43%), Gaps = 82/422 (19%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQ-----RRLIAEWLKVNSDYYLDTITYEDLGLSAFKGK 56 K AI+Y+RFS+ Q GDS NRQ R +K+ DY +DLG SA+K Sbjct: 4 KYAISYIRFSTAEQSLGDSYNRQFEEAERFCFENNIKIVKDY-------KDLGKSAYKSV 56 Query: 57 H-AQSGAFSEFLDAIEHGYIL--PGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVIT 113 + A + FL+A++ G I T LLVESLDRLSR +V ++ IL GI ++T Sbjct: 57 NLAPESGLNYFLNALKRGEISNPKETHLLVESLDRLSRAQVTTSMHLFLGILKQGISILT 116 Query: 114 LCDNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESG------ 167 L D VY + E ++ ++++ +A++ES KS R+ WK+K++ A Sbjct: 117 LADGKVY--EQGCELSDIVTSVMMLAKAHQESVDKSYRIGKVWKRKKEAARADAKNKAGT 174 Query: 168 ----TIMTASCPRWLSLDDKRTAFVPDPD--RVKTIELIFKL--------------RMER 207 T +T CP WL + + FV + V T++LIF L +E Sbjct: 175 DKKVTALTKMCPFWLKIVKENDRFVYEIKEIEVNTVKLIFDLATGDAIDNEVELSISVEN 234 Query: 208 RSLNA--IAKYLNDHAVKNF-SGKESA---WGPSVIEKLLANKALIGICVPS-------- 253 ++ IA+ LN+ + SGK W S I +++ NKA+ GI P Sbjct: 235 TKFSSIEIARILNNENIPIIKSGKRKRTDYWHASNINRIITNKAVYGIYQPKLLVKKEYT 294 Query: 254 ---------------YRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPM 298 + G+ I E ++P +IS D F R F K Sbjct: 295 HHDDFNESYPVEKPYFENDGEAIEE---FFPVIISKDKFDRATHQREEKFKGKRGKKGKR 351 Query: 299 LINLLRTVMKCEACGNTMIVHAVSGSLHG-----YYVCPMRRLH-RCDRPSIKRDLVDYN 352 NL + C C ++M VH+ G+ Y C R+ C SI +++YN Sbjct: 352 FSNLFNGLALCRKCQSSM-VHSDKGTSKKGKRWVYLQCSNARIKGGCSATSINYSILEYN 410 Query: 353 II 354 ++ Sbjct: 411 VL 412 >UniRef50_A6D1G1 Recombinase n=2 Tax=Vibrio RepID=A6D1G1_9VIBR Length = 598 Score = 114 bits (285), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 98/331 (29%), Positives = 152/331 (45%), Gaps = 30/331 (9%) Query: 7 YMRFSSPGQMSGDSLNRQRRLIAEWLK-VNSD--------YYLDTITYEDLGLSAFKGKH 57 Y R S Q+ GD L RQ + +++++ VN Y L D GLSA+ G + Sbjct: 11 YSRVSKGTQVKGDGLRRQIEIASKFIEDVNMSNSRDGLPVYTLADSPIYDRGLSAYFGLN 70 Query: 58 A-QSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCD 116 ++ FL A E+G + GT L+VE++DR+SR V +A +GIDV Sbjct: 71 TDENAGLGAFLKAAENGQVEKGTLLIVEAIDRISRLPVDDARALFARFKKYGIDVAICRF 130 Query: 117 NTVYNID---SLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTAS 173 N + D L + + AI +A ESE KS R++ + KR E G T+ Sbjct: 131 NLIIYHDKSSDLGQDLLITTAIHLAHL---ESEQKSKRIRARFTHKRLLEKEGGARRTSI 187 Query: 174 CPRWLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWG 233 P W+ L +T FV P+R + + + L+++ + I YLN+ ++ + AW Sbjct: 188 SPSWIELSKDKTHFVLIPERARIVRKMVDLKLQGWGAHRITVYLNERGYPCWN-RSKAWY 246 Query: 234 PSVIEKLLANKALIGICVPSYRARG-KGISE------IAGYYPRVISDDLFYAVQEIRL- 285 ++EK L L+G P G KG+ + I GYYP +I+++ + IRL Sbjct: 247 TKIVEKYLKMIQLVGDFQPVEHVHGEKGMRKEPVGDVIKGYYPALITEEEW-----IRLK 301 Query: 286 APFGISNSSKNPMLINLLRTVMKCEACGNTM 316 A F S + NL ++ C CG M Sbjct: 302 ASFKRSGGRQTGAFSNLFSYMLYCPTCGTCM 332 >UniRef50_UPI0001BC7310 putative site-specific recombinase n=1 Tax=Vibrio parahaemolyticus AN-5034 RepID=UPI0001BC7310 Length = 261 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 72/247 (29%), Positives = 120/247 (48%), Gaps = 12/247 (4%) Query: 38 YYLDTITYEDLGLSAFKGKHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEA 97 + L T+ DLGLSAF ++ + G F L I+ G I G+ L++E++DR+SR+ E+ Sbjct: 13 WQLSPTTFRDLGLSAFSAENLKKGDFGIILQLIKEGSISSGSVLILENVDRMSRQNPQES 72 Query: 98 IERLKLILNHGIDVITLCDNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWK 157 + + I+ G+ + T+ D ++ DS + +L+ L A+RA+EES KS RV+ + Sbjct: 73 VYTMLDIIRAGVRIYTIHDRRLHEKDSQDSFMNLMLWALAAERAHEESLTKSRRVREAKA 132 Query: 158 KKRQDALESGTIMTASCPRWL---SLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIA 214 K RQ A E G + P W+ + + D +R + + LIF+L+++ L AI Sbjct: 133 KARQKAREEGKAIIGRVPSWIRKVTPKGGEPYYELDEERAEVVRLIFQLKLDGYGLGAIT 192 Query: 215 KYLNDHAVKNFSGKE------SAWGPSVIEKLLANKALIGICVPSYRARGKGISE---IA 265 L + + W S + K L + + G P R GK + E I Sbjct: 193 NELIKRGIPPMGNRNVRKDLAPKWQVSTVRKWLRSPTVYGQYQPHIRVDGKKVPEGDPID 252 Query: 266 GYYPRVI 272 +YP + Sbjct: 253 NFYPAAV 259 >UniRef50_Q07ZW2 Recombinase n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q07ZW2_SHEFN Length = 601 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 91/326 (27%), Positives = 148/326 (45%), Gaps = 34/326 (10%) Query: 7 YMRFSSPGQMSGDSLNRQRRLIAEWLKVNS---DYYLDTITYEDLGLSAFKGKHAQSGAF 63 Y RFSS GQ SL RQ +WLK + + +D + D G+SAF GKH +SG+ Sbjct: 28 YQRFSSIGQDGNSSLFRQGEAQRDWLKNHPHCIETEIDNSPFIDAGVSAFSGKHLESGSL 87 Query: 64 SEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNID 123 + AIE I PG+ +LVE RLSR + E L I +H + ++T D VY+ Sbjct: 88 GRLVAAIESKAIPPGSIILVEHFSRLSRMNISETGRLLDRIWDHDVTIVTARDKAVYSPA 147 Query: 124 SLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDK 183 ++ + ++ I+ +A+ +S+ +S +VK SW ++ +A ++ P WL + K Sbjct: 148 MRDDMSTRLRLIIEIDKAHSDSKWRSEKVKSSWTRRAFNAEDNDIPPKMRMPFWLDKNGK 207 Query: 184 RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKE--SAWGPSVIEKLL 241 + ++ IF+L ++ I + L K F G + P+ +++ Sbjct: 208 LNEY------ESLVKKIFELYLDGFGQVRIERELK----KLFPGAKPLKNVNPTKFIRII 257 Query: 242 ANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPF--GISNSSKNPML 299 N+ IG GK + Y VI D F++ QEI + + P Sbjct: 258 LNRKCIG------EVYGKRL------YEPVIDDATFFSAQEIHSKRLYKSVKADRRWP-- 303 Query: 300 INLLRTVMKCEACGNTMIVHAVSGSL 325 LR ++ C CG+ M + S SL Sbjct: 304 ---LRGLITCGHCGSGMSIQQSSNSL 326 >UniRef50_UPI0001905A69 hypothetical protein RetlB5_21195 n=1 Tax=Rhizobium etli Brasil 5 RepID=UPI0001905A69 Length = 392 Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 81/251 (32%), Positives = 132/251 (52%), Gaps = 18/251 (7%) Query: 116 DNTVYNIDSLNEPYS-LIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASC 174 D VY + L+E + L+ A+L+A RA+EES K RV +W+ KR +A + +T+ Sbjct: 3 DQRVYTEEVLDEDQTALMVALLVAMRAHEESAKKGRRVGQAWENKRANA--ANKPLTSKA 60 Query: 175 PRWLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGP 234 P WL L R+ F P+R + + IF+ +E R +AIA+ LN V F G+ W Sbjct: 61 PGWLKLRGDRSGFDLIPERAEIVRRIFQQTLEGRGQHAIAESLNREGVPVF-GRGKIWHR 119 Query: 235 SVIEKLLANKALIGICVP--SYRARGKGI----SEIAGYYPRVISDDLFYAVQEIRLAPF 288 S I+K+L + +++G+ VP + R+ GK + + GY+P I ++F V + Sbjct: 120 SYIKKMLEDASVVGVYVPHRADRSSGKKVRIPTQPVEGYFPAAIDREVFERVAAL---SN 176 Query: 289 GISNSSKNPMLINLLRTVMKCEACGNTMI-VHAVSGSLHG--YYVCPMRRLHR-CDRPSI 344 G + ++K+ M N+L + KC CG TM V+ SG G Y VC + + C+ + Sbjct: 177 GRTANTKSGM-ANILAGLAKCPRCGATMTRVNKGSGPKGGRPYLVCTVAKAGAGCEYEAS 235 Query: 345 KRDLVDYNIIN 355 D ++ I+N Sbjct: 236 PCDQIETAIVN 246 >UniRef50_A6D0Z7 Putative uncharacterized protein n=1 Tax=Vibrio shilonii AK1 RepID=A6D0Z7_9VIBR Length = 623 Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 99/336 (29%), Positives = 162/336 (48%), Gaps = 33/336 (9%) Query: 6 AYMRFSSPGQMSGDSLNRQRRLIAEW-----LKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 +Y RFS+ Q G SL RQ++L E L N D+ + D GLSAF G H Sbjct: 13 SYRRFSNLKQEKGRSLARQKKLTEEIAEKFNLPFNEDFLMT-----DKGLSAFHGHHKSK 67 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 GA FL A+E + PG+ L+VESLDRLSRE+ A L +++ I V+T D VY Sbjct: 68 GALGVFLAAVESKMVKPGSVLIVESLDRLSREQPYVAQATLAALVSSDITVVTATDGKVY 127 Query: 121 NIDSL-NEPY-SLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTI--MTASCPR 176 + +++ +P ++I ++L RA+ ES K+ + + + E G + + S P Sbjct: 128 SKETMAKDPLGTMIMSVLEMIRAHNESLTKTEK-SVDFIHAEILKHEEGKVADVAGSIPF 186 Query: 177 WLSLDDK-----RTAFVPDPDRVKTIELIFKL-RMERRSLNAIAKYLNDHAVKNFSGKES 230 W+S +T F + + TI L+ + ++ + L I++ L+ +K G E Sbjct: 187 WISRKPSPHKKIKTGFELN-EHESTIRLLIDMYHVQGKGLRTISRELHSLGIKAPKGGE- 244 Query: 231 AWGPSVIEKLLANKALIG-----ICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRL 285 WG S + + +N AL G + A+ + + YYP ++S + F ++Q ++ Sbjct: 245 VWGVSTLSSVFSNPALCGRHKFNLEYLKDGAKQQEAYTLELYYPPIMSAEDFESMQALKK 304 Query: 286 APFGISNSSKNPM--LINLLRTVMK---CEACGNTM 316 G S K+ L+ LL K C CG+++ Sbjct: 305 RRSGASKGDKSDKGGLVYLLTDYGKKSFCAKCGSSI 340 >UniRef50_UPI00016C36BA Recombinase n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C36BA Length = 176 Score = 107 bits (268), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 65/171 (38%), Positives = 99/171 (57%), Gaps = 5/171 (2%) Query: 4 AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG-- 61 A +Y+RFS Q GDS+ RQ L AE LD T++DLG+S F G+H + Sbjct: 8 AFSYIRFSQASQAKGDSVRRQTEL-AELGAKQLGVKLDPSTFQDLGVSGFTGEHRNNPDR 66 Query: 62 -AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 + FL A+E G + G LLVE+LDRLSRE V +A+ L ++N G+ V+ L + + Sbjct: 67 HGLAMFLLALEKGKVKRGDYLLVENLDRLSREHVMKALGLLLNLVNAGVRVVQLSPSLMV 126 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMT 171 D ++P +L+ A++ R N ES +K+ R +W++K+++A E GT T Sbjct: 127 -FDENSQPMALMMAVMELSRGNSESAMKAERCGKAWQEKKKEAREEGTPTT 176 >UniRef50_C9QGK9 Recombinase n=1 Tax=Vibrio orientalis CIP 102891 RepID=C9QGK9_VIBOR Length = 528 Score = 104 bits (259), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 103/358 (28%), Positives = 164/358 (45%), Gaps = 23/358 (6%) Query: 4 AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAF 63 AI Y RFSS Q+ DS+NRQ ++ + + + L Y DLG+SA+K + + G Sbjct: 24 AILYSRFSSRNQVGNDSINRQLEGAQKFCEYH-NLKLSEANYSDLGISAYKD-NVREG-L 80 Query: 64 SEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNID 123 L+A+ G I + +L + RLSR+ ++ + ++ G T+ DN VY+ Sbjct: 81 ELLLNAVRDGTIPANSWILCHTTCRLSRKGFQHVLKLVSELVATGCKFCTINDNQVYDST 140 Query: 124 SLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDK 183 ++N+ S + I+ A A ESE KS +K + ++ R++ + P W++L D Sbjct: 141 NINKLSSALPLIISADLAFSESEKKSLMIKHAKEQTRKNRK-----IVGKQPYWITLQDG 195 Query: 184 RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLAN 243 + VKT I LR++ S IAK LN + +GK +WG + I K + N Sbjct: 196 KPMLNDFSTIVKT---IIDLRLKGYSAQRIAKQLNADGHLSPTGK--SWGAAAIRKTIDN 250 Query: 244 KALIGICVPSYRARGK--GISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLIN 301 L G S GK + + YP + S ++ ++ + + SK+ Sbjct: 251 HVLYGAKEYSEMKDGKLVPVEIVEDLYPALCSKSIWLQIKYEK-GTKEVGKRSKSSPFSK 309 Query: 302 LLRTVMKCEACGNTMIVHAV--SGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINEL 357 LLR C CG+ M + G + Y VC CD+ S RDL D I+ EL Sbjct: 310 LLR----CACCGSAMTTRSTYQKGVKYDYRVCIRSTEGSCDQKSRFRDL-DNIILGEL 362 >UniRef50_B5WBE5 Resolvase domain n=1 Tax=Burkholderia sp. H160 RepID=B5WBE5_9BURK Length = 576 Score = 104 bits (259), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 89/333 (26%), Positives = 159/333 (47%), Gaps = 21/333 (6%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 K+ +Y+R S Q SG + RQ +W + + +++T DLG SAF+GK+ + G Sbjct: 11 KRLFSYLRISDVRQASGTGIARQIEGARKWALEHGFVFDESLTMRDLGKSAFRGKNTEMG 70 Query: 62 -AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 A F++ I+ G I G L VE+LDRLSR+KV +A+ L I+ HGI V+T D VY Sbjct: 71 SALGAFIEQIKSGRIEQGCVLYVEALDRLSRDKVVKAMNLLTTIIGHGITVVTGTDGNVY 130 Query: 121 NIDSLNE-PYSLIKAILIAQRANEESEIKSSRVK--LSWKKKRQDALESGT-IMTASCPR 176 N ++ E P L ++ + R N+ES +K RV+ + K +R E G + + P Sbjct: 131 NQQTIEENPGLLFVSVGMMVRNNDESRMKRDRVRDAMRIKCERWQKGERGIHLAVGADPS 190 Query: 177 WL--SLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGP 234 W+ S D+KR + + + + + E AI + L ++ + Sbjct: 191 WVQYSKDEKRFEII--EKHAEPVRAMIRYFREGHGGTAILERLR---TDGYTAPKGISNT 245 Query: 235 SVIEKLLANKALIG----ICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGI 290 S + +++ + L+G + + + + + YYP ++++ F ++Q + L G Sbjct: 246 SRVYQIMRCRNLVGERLVTIMDKETQKVEYSATLKDYYPSLMTEAEFQSLQHL-LDQRGR 304 Query: 291 SNSSKNPMLINLLR--TVMKCEACGNTMIVHAV 321 + L+NL +M+C C ++ + Sbjct: 305 RHGKGT--LVNLFTGAGLMRCGHCSRPVVAQNI 335 >UniRef50_UPI00016C51D7 putative integrase/recombinase n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C51D7 Length = 457 Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 106/429 (24%), Positives = 193/429 (44%), Gaps = 34/429 (7%) Query: 81 LLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDSLNEPYSLIKAILIAQR 140 L++E LDRLSR+K+ +++ + IL G D+ ++ + +Y DSLN+P L+ I Sbjct: 2 LILEDLDRLSRDKIMASVDVARKILEQGCDLFSVIEYRLYTKDSLNDPMGLMGLIWRFYL 61 Query: 141 ANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDKRTA--------FVPDPD 192 A+EES+ K+ R + +W +K + A E G + + CP WL + D++ F P+ Sbjct: 62 AHEESQKKAVRSRENWTEKHRQAAE-GKVFSKICPGWLKVVDQKKKNNRVTGGRFEEIPE 120 Query: 193 RVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLANKALIG-ICV 251 RV+ + +F+ +E L +I + L + V F S W I +L ++ ++G + Sbjct: 121 RVELVRKLFRWCIEGHGLQSIMRRLLEEKVPPFR---SGWAQKYIWDILRDRRVLGELPT 177 Query: 252 PSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEA 311 + + K I GYYP +I + + A Q+ G + +NL +++ Sbjct: 178 QIHGEKVKPGPAIPGYYPPIIDEKTYRAAQDAMKLRSGKQGRKGD--FVNLFTGLVRYPE 235 Query: 312 CGNTMIV----HAVSGSLHGYYVCPMRRLHRCDRP--SIKRDLVDYNIINELL-FNCSKI 364 M+ H Y + + P +++ + + +++ L S + Sbjct: 236 HDCNMVFISKPKTNKSGKHNYRYLVSYLGWKKEHPYVAVRYERFESVVLHWLYELKASDL 295 Query: 365 QPVENKKDANETLELKIIELQMKINNLIVAL-SVAPEVTAIAEKIRLLDKELRRAS--VS 421 P EN++D ETL+ + L+ +I N+ L + EV A+ K+ + E R + + Sbjct: 296 LPQENQEDGIETLKAQRKFLEERIKNIADQLDQLGAEVPAVMAKLAEMQVEKTRLTNEIE 355 Query: 422 LKTLKSKGVNSFSDFYAIDL-TSKNG------RELCRTLAYKTFEKIIINTDNKTC--DI 472 K+ + N +DL SK+G RE R EKI ++ ++K I Sbjct: 356 EKSRQQTRPNIEDTKALVDLMKSKSGSELKELREQVRQRLLMHLEKIEVSVEDKRVFLTI 415 Query: 473 YFMNGIVFK 481 +G V K Sbjct: 416 RLHSGTVRK 424 >UniRef50_C9Q5S8 Putative uncharacterized protein n=1 Tax=Vibrio sp. RC341 RepID=C9Q5S8_9VIBR Length = 286 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 85/255 (33%), Positives = 123/255 (48%), Gaps = 23/255 (9%) Query: 7 YMRFSSPGQMSGDSL-NRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFSE 65 Y R S+ Q+ G L +Q + + E L + + + ++ D GLSA+ GKH + GA Sbjct: 10 YARVSTTKQIHGAGLETQQEKSVLERLSLEHNLPIHDESFVDQGLSAYHGKHKE-GALGV 68 Query: 66 FLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDSL 125 LD I G I G+ L+V SLDRLSRE V A+E+L I+N G+ V T D +++ S Sbjct: 69 VLDRIRSGEIPSGSILVVFSLDRLSRETVNIAMEQLLSIINQGVRVYTHIDGKLFDAKSQ 128 Query: 126 NEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMT--ASCPRWLSLDDK 183 LI +++ QRANEESE KS R K S K + E+G P W +D Sbjct: 129 YLTPDLIISLITMQRANEESETKSKRTKGSHKVALKRWKETGKSQRNLGRTPIW--IDQS 186 Query: 184 RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKES----------AWG 233 A+ + + VK ++++ I +YL+ NF K + W Sbjct: 187 SNAYNINAEGVKK---AVEMKIAGFGDLKIKQYLD----ANFEYKPTRIKGRIKPLNKWD 239 Query: 234 PSVIEKLLANKALIG 248 VI L N+ALIG Sbjct: 240 YGVIYNLWGNRALIG 254 >UniRef50_UPI00016C4027 recombinase-related protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4027 Length = 390 Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 53/153 (34%), Positives = 89/153 (58%), Gaps = 6/153 (3%) Query: 130 SLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDKRTAFVP 189 +LI+ ++ RA+EES KS R+ +W++KR+ A+E T MT+ CP+WL + + + FVP Sbjct: 2 TLIEPLIYFSRAHEESATKSKRISENWEQKRKAAVEKKTPMTSVCPKWLEVKEGK--FVP 59 Query: 190 DPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLANKALIGI 249 P+RV+ ++ IF+L +E + K L + +K + G+ W + + +L ++ ++G Sbjct: 60 VPERVELVKRIFRLTLEGMGTYFVIKKLTEEGIKGW-GRNGKWNTAYVRMILVDRRVLGE 118 Query: 250 CVPSYRARGKGISE---IAGYYPRVISDDLFYA 279 P GK + I Y+PRVISD FYA Sbjct: 119 YQPKKLVEGKMQNHGERILDYFPRVISDQDFYA 151 >UniRef50_B1J377 Resolvase domain n=1 Tax=Pseudomonas putida W619 RepID=B1J377_PSEPW Length = 548 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 79/304 (25%), Positives = 144/304 (47%), Gaps = 31/304 (10%) Query: 45 YEDLGLSAFKGKHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLI 104 YED G+SA+ G + + G + +D IE I G + VES+DRLSR+++ + + + I Sbjct: 10 YED-GVSAYTGDNEKKGKLKDLIDQIEALTISEGDYVFVESIDRLSRQRLLQTKDLVYGI 68 Query: 105 LNHGIDVITLCDNTVYNIDSLNEPYSLIKAIL---IAQRANEESEIKSSRVKLSWKKKRQ 161 L G+ ++T D VY + N+ +L + I+ I+ RA+EES KS+R K +W+K + Sbjct: 69 LKKGVIIVTTIDGYVYRLRE-NQQDTLHQDIMLSVISTRAHEESLTKSTRRKSAWRKAKT 127 Query: 162 DALESGTIMTAS-CPRWLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDH 220 +A E+G + + P + ++ + D IE I + ++R + A K N Sbjct: 128 EA-ETGIVFNKNRLPYGVIFNEATQSLGIDEVARDEIEFILQ-NLKREGVTATIKKANQF 185 Query: 221 AVKNFSGKESAWGPSVIEKLLANKALIGICVPSYRARGKGISE--IAGYYPRVISDDLFY 278 A N W + ++ L K ++G + + GK + + + YYP+++ LF Sbjct: 186 AKIN-------WTQARVKDLFETKYILGYFMSQKKIEGKIVFDKYVEDYYPKMVEPSLFL 238 Query: 279 AVQE------IRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIV---HAVSGSLHGYY 329 +E +R ++ + IN+ R C+ CG +++ + G + Y Sbjct: 239 EAKEAMKNRKVRKHSGRVTQDN-----INIFRHSCFCQRCGKSLVFMNNYNRKGRRYFYM 293 Query: 330 VCPM 333 C Sbjct: 294 TCQQ 297 >UniRef50_Q7U778 Possible site-specific recombinase n=1 Tax=Synechococcus sp. WH 8102 RepID=Q7U778_SYNPX Length = 632 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 97/364 (26%), Positives = 165/364 (45%), Gaps = 27/364 (7%) Query: 4 AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAF 63 +Y R S+ Q+ G L RQ + + + + D GLSAF G H GA Sbjct: 27 GFSYERVSTKSQVDGVGLKRQHDAFEPFCQRHG-LIPNADPIRDEGLSAFHGTHKSKGAL 85 Query: 64 SEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNID 123 F+ A I G+ L+VE DR SR + L + + + + + +++ + Sbjct: 86 GAFIQARRDDLIPAGSVLVVEEWDRFSRRTTSVSERMLHELWDLDLALGIVSQDSIVTEE 145 Query: 124 SLNEPYSLIKAILIAQ-RANEESEIKSSRVKLSWKKKRQDALESGT--IMTASCPRWLSL 180 NE L + + Q +N ES KS R+K W+++R L SG + + P+WL++ Sbjct: 146 LYNENIGLSVMLKVLQNESNAESSKKSRRIKNVWQERRDSYLNSGKKFLSLSDAPKWLAI 205 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNA--IAKYLNDHAVKNFSGKESAWGPSVIE 238 + FVP P +TI+LIF+L ++ L++ IA+ LN + +G WG + + Sbjct: 206 GE--NDFVPAP-LAETIQLIFEL-AAKQGLSSVQIAEELNRRGLSTATG--GTWGNANVC 259 Query: 239 KLLANKALIGICVPSYRARGKGISEIAGYYPRVI-SDDLFYAVQEIRL---APFGISNSS 294 K+L N ++G ++ G GI GYYP ++ + + A + ++ AP + Sbjct: 260 KVLRNDQVMG-----HKCWGDGIIS-QGYYPVIVDAKTVELARENVKRRYSAPARGRTTR 313 Query: 295 KNPML---INLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHR-CDRPSIKRDLVD 350 KN L N+ + + C CG M+ + + VC + R C S +R VD Sbjct: 314 KNGELGPCRNIFKGLTYC-CCGAPMVDTSSHSGKYLDLVCSAQNDGRDCIVKSKQRWKVD 372 Query: 351 YNII 354 ++ Sbjct: 373 EELL 376 >UniRef50_A6FFB9 Putative uncharacterized protein n=1 Tax=Moritella sp. PE36 RepID=A6FFB9_9GAMM Length = 512 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 90/336 (26%), Positives = 160/336 (47%), Gaps = 44/336 (13%) Query: 36 SDYYLDTITYEDLGLSAFKGKHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVG 95 S +++D+I+ D+ F+GK GA S+ + LL ++ + RE V Sbjct: 41 SRFFIDSIS--DIKRLVFQGK---LGALSD------ESTLSKPIVLLFGDINEIDRENVH 89 Query: 96 EAIERLKLILNHGIDVITL-CDNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKL 154 + L+++ GI++ T CD+ +Y D N ++LI + A + S KS+ Sbjct: 90 NFYADIYLLMSLGINMATTDCDH-IYTKDEPNAIHNLIFKFIELWEAKKSSLKKSNSAAK 148 Query: 155 SWKKKRQDALESGTIMTASCPRWLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIA 214 W KR+ +ESG P W + D++ ++ + D K+++L F+ ++ +S++A A Sbjct: 149 VWSVKRE-LIESGETPKLKSPAWFTYDEQNKKYILN-DLSKSVKLCFEKYLDNKSMSATA 206 Query: 215 KYLNDHAVKNFSGKESAWGPSVIEKLLANKALIGIC-VPSYRARGKGISEIAGYYPRVIS 273 + LND + N G WG + + ++L NKA G+ V +++ +YP VIS Sbjct: 207 RLLNDMNI-NTLGSAKKWGQTSVRQILVNKATYGLLDVRTFQHE--------DFYPGVIS 257 Query: 274 DDLFYAVQ-EIRLAPFGISNSSKNPMLINL-----LRTVMKCEACGNTMIVHA-----VS 322 D FY Q EI+ ++++ +P+L NL L + KC CG + +H S Sbjct: 258 KDTFYLTQAEIKRR----NSTNSDPILSNLKTSNILTKIAKCGVCGMNLYLHGKKQYPAS 313 Query: 323 GSLHG--YYVCPMRRLH--RCDRPSIKRDLVDYNII 354 G + Y C R+ + +C PS + V+ +I Sbjct: 314 GEIQDYRYLTCSSRKYNNEKCKLPSFRYKYVEAIVI 349 >UniRef50_Q7U6I7 Partial homology to phage recombinase n=1 Tax=Synechococcus sp. WH 8102 RepID=Q7U6I7_SYNPX Length = 667 Score = 91.3 bits (225), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 99/335 (29%), Positives = 152/335 (45%), Gaps = 40/335 (11%) Query: 2 KKAIAYMRFSSPGQMSGDSLN---RQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHA 58 K AI+Y R S+ G+ SG+ + RQ+R I WL + DY LD ++ ++ A Sbjct: 20 KVAISYSRVST-GKQSGEDRSGEERQQRAIESWLSEHPDYSLD----REIRVTV---SGA 71 Query: 59 QSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCD-- 116 ++G F F+ +E G + GT L+VE + R SRE + EA+ + L L I C+ Sbjct: 72 KAGRFEWFISELEKGVLPRGTCLVVEKVSRFSREPI-EAVLKTLLRLWDAGGAIAFCELG 130 Query: 117 ---NTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMT-- 171 + + DS + Y ++ AI QRA E + R L+ ++K +D + GT Sbjct: 131 GKVLSCFEQDS-GDAYVVLGAI---QRARGEWLERQDR-SLAARRKERDLHKQGTHKPKA 185 Query: 172 ------ASCPRWLSLDDKRTAFVPDPDRVKTI-ELIFKLRMERRSLNAIAKYLNDHAVKN 224 A P WL + D VKTI L KL + R IA +L+ +K Sbjct: 186 RTKRGRADYPFWLDVKDGEYVLNDWATHVKTIFSLAPKLGITR-----IANHLDSQGIKA 240 Query: 225 FSGKESAWGPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIR 284 S W P+ + +L N+A +G V + K E YP V++ + + A Q + Sbjct: 241 VSDGRRRWTPNSVSGVLRNEAALGYKV--FWKDNKPSDEKVVCYPPVVTQEEWDAAQ-MG 297 Query: 285 LAPFGISNSSKN-PMLINLLRTVMKCEACGNTMIV 318 L+ S S N P NL + C CG+ M+V Sbjct: 298 LSSRSQSRPSNNSPTQQNLFAGSIYCRHCGSPMVV 332 >UniRef50_B5QBH4 Resolvase domain protein n=1 Tax=Salmonella enterica subsp. enterica serovar Virchow str. SL491 RepID=B5QBH4_SALVI Length = 624 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 104/446 (23%), Positives = 181/446 (40%), Gaps = 106/446 (23%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 M K Y R SS Q+SG L+RQ + E++ N + + D G+S + G + + Sbjct: 1 MIKTFIYSRVSSQEQLSGGGLDRQETDVREYVTRNGLDQYEIVAMVDRGISGYDGSNMRD 60 Query: 61 GAFSEFL-DAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHG-IDVITLCDNT 118 G ++ DAI Y G+ L++E++DR SR A+E +++N G I V + NT Sbjct: 61 GELGKWYKDAITGMYW--GSHLVLEAIDRFSRRDPMLAMEDFTVLVNKGGIKVHIVKFNT 118 Query: 119 VYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWL 178 N D+L P ++ A+ ES+ KS R+ W+++R+ AL++GT +TA P W+ Sbjct: 119 FINGDNL--PM----LSMMMNLAHSESKQKSDRISKGWQRRRRMALDNGTAITARTPYWI 172 Query: 179 SLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLND------------------- 219 + D + + + +E F + + S IAK LN+ Sbjct: 173 DVRDNE--YRLNNSSIAVVE-AFAMYKQGLSCGLIAKKLNELKHYFPYMWTKTAVQHIVD 229 Query: 220 ------------------------HAVKNFSGKESA-------WGPSVIEKLLANKALIG 248 +V++ + K +A W + KLL NK++ G Sbjct: 230 GLNTSGIIDAPRAIKTIKAFYKSGFSVEDIAKKMNAEFQFMKEWNAPAVHKLLQNKSVTG 289 Query: 249 IC-------VPSYRARGKGI-----SEIAGY----YPRVISDDLFYAVQEIRLAPFGIS- 291 + + + + GK + SE Y YP++IS D F +Q++ + + Sbjct: 290 LVEIQKRKLIQEFDSDGKPLELRTKSEGEKYFESIYPQIISIDDFELIQKLLESNRKVDT 349 Query: 292 --------------NSSKNPMLINLLRTVMKCEACGNTMIVHAVSG-------SLHGYYV 330 N + +L ++ +C CG M + V + Y Sbjct: 350 KTGKGQTTGGTVTQNEDGELVKQFILSSLCRCYKCGGAMFNNIVRSKRKNGKVDTYSYLR 409 Query: 331 CPMRRLHRCD-----RPSIKRDLVDY 351 C R CD P I+R ++++ Sbjct: 410 CLNERDAHCDVKALNYPVIERAIIEH 435 >UniRef50_A9MR78 Putative uncharacterized protein n=2 Tax=Gammaproteobacteria RepID=A9MR78_SALAR Length = 173 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 51/153 (33%), Positives = 84/153 (54%), Gaps = 4/153 (2%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 MKK +Y+R+S+ Q SL RQ ++ ++ Y+ + D G+SAF+GK+ Sbjct: 1 MKKLYSYIRWSTDKQTGNTSLERQTEKAKQYAAIHGLEYVQIL---DAGVSAFRGKNTTR 57 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 G F F++A++ G I + L VE+LDRL+R+ V A+ +L G+ ++T D Y Sbjct: 58 GEFYGFINAVKAGVIPSDSWLYVENLDRLTRQDVMTALNLFTSLLKLGLTIVTGMDGKTY 117 Query: 121 NIDSL-NEPYSLIKAILIAQRANEESEIKSSRV 152 +S+ N + L+ ++ + RANEES K R Sbjct: 118 TEESVSNNVHDLMMSLFLFSRANEESLTKQKRA 150 >UniRef50_B5IL90 Putative phage recombinase n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IL90_9CHRO Length = 652 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 91/328 (27%), Positives = 140/328 (42%), Gaps = 43/328 (13%) Query: 20 SLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFSEFLDAIEHGYILPGT 79 L RQ + + WL + D+ L + D G+SA +GKH +GA FL A G + PG+ Sbjct: 7 GLERQEQALRSWLAEHPDWEL-AESLVDPGVSAGRGKHRTTGALGRFLQAARTGAVPPGS 65 Query: 80 TLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDSL---NEPYSLIKAIL 136 L+VES+ R SRE + + L I C + +D+ EP+ L + Sbjct: 66 CLVVESMSRFSREAERQVLGVLLSDFWATGLAIAFCSDGGAVLDAELIDREPHRLHGLLG 125 Query: 137 IAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDKR-----TAFVPDP 191 +A E E KS R + + KRQ + G + A+ P W++ R TA Sbjct: 126 AMAQARREWEEKSRRSRGA-AVKRQQLQDQGVKVAAATPWWIARGSDRRLVRDTAGNLQL 184 Query: 192 DR--VKTIELIFKLRMERRSLNAIAKYLND--HAVKNFSGKES--------AWGPSVIEK 239 D+ V T+ +L M+ IA+ LND H+ + + W S + Sbjct: 185 DQACVATLRRAVELAMQGLGSTLIAQQLNDEGHSPPPTRTRRNQYAANAGEGWNHSRVTT 244 Query: 240 LLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSK---- 295 L N AL+G +R G S + G+YP V+S + + ++ G++ K Sbjct: 245 ALRNPALVGDL---HRQDG---STLEGFYPPVVSRNEWEQLRS------GMAMRDKLRGQ 292 Query: 296 ----NPMLINLLRTVMKCEACGNTMIVH 319 L L +TV +C ACG M H Sbjct: 293 LRGGTQKLHFLFQTVCRC-ACGEPMSYH 319 >UniRef50_Q1VBK2 Resolvase-like:Recombinase protein n=1 Tax=Vibrio alginolyticus 12G01 RepID=Q1VBK2_VIBAL Length = 545 Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 105/400 (26%), Positives = 165/400 (41%), Gaps = 56/400 (14%) Query: 1 MKKAIAYMRFSSPGQMS-GDSLNRQRRLIAEWLKVNSDY-----------YLDTITYEDL 48 M K Y R S Q G + RQ + W+ SDY Y + YED Sbjct: 1 MNKYHLYQRVSKQIQAEEGQGIQRQEQACEHWI---SDYNKRLLSEGKSAYSKGLIYEDR 57 Query: 49 GLSAFKGKHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHG 108 G SA+ + + G ++ IE+G I G +++E +DR SR V + + I++ G Sbjct: 58 GKSAYTAANFKRGELGALINDIENGKIEKGDLIVIELIDRFSRANVDFVRSQFQRIIDAG 117 Query: 109 IDVITLCDNTVY--NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALES 166 + + N V+ N++S++ I + A +ES KSSR+K S R+ +S Sbjct: 118 VKIAITKWNLVFEENMESVSSVTGRILLEIGMYLAYQESSQKSSRIKAS----RKLLEDS 173 Query: 167 GTIMTASCPRWLSLDDKRTAFVPDPDRVKTIELIFKLRME-RRSLNAIAKYLNDHAVKNF 225 G A P WL+ + ++ + + I IF L++ I K L D + + Sbjct: 174 GRKSIAKPPFWLARNSDLKSYTIIEENAEIIRKIFYLKLNFNYGPQKIIKSLGDLDIYRY 233 Query: 226 SGKESAWGPSVIEKLLANKALIGICVPSYRARGKGISEIAG--YYPRVISDDLFYAVQE- 282 S E+ ++I K N L + +Y I ++ G YYPR+I D FYAVQ+ Sbjct: 234 SFDENG---NLI-KTTKNSPLSESSINAYIRNTNVIGKLDGKDYYPRIIDDRTFYAVQKR 289 Query: 283 IRLAPFGISNSSKNPMLINLLRTVMKC---------------EACGNTMIVHA--VSGSL 325 R G+ + N+ V KC CG M + V Sbjct: 290 TRENTGGVG-----EIFRNVFVGVGKCGCLIRKENENGCGSLAKCGYIMAFSSRKVKNPT 344 Query: 326 HGYYV-CPMRRLH-RCDRPSIKRDLVD---YNIINELLFN 360 G Y+ C +R +CD +I L YN++ L F+ Sbjct: 345 KGMYLKCNRKRKSTKCDSENINYYLAQNKIYNVLKSLKFD 384 >UniRef50_A6LK15 Resolvase, N-terminal domain n=1 Tax=Thermosipho melanesiensis BI429 RepID=A6LK15_THEM4 Length = 494 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 117/467 (25%), Positives = 201/467 (43%), Gaps = 65/467 (13%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 KA AY R+SS Q S S+ Q I E+ K N+ ++T Y D K K A+S Sbjct: 10 KAAAYARYSSNNQ-SELSIEAQLSEIKEYAKNNNIVIVET--YVD------KAKSAKSAD 60 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 EF I +LV LDR SR + +++ L+ N + +I++ + ++ Sbjct: 61 RPEFQRMISDAKKHKFDVILVHKLDRFSRNRY-DSLTYSHLLENSNVKLISITEQ--FSD 117 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 D E L+K+I+ + E I + R ++ K K A G + P L + Sbjct: 118 DPAGE---LVKSII---ESVNEWYINNLRNEVKTKTKY--AAMKGYFLGGMPPLGYDLKE 169 Query: 183 -------KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPS 235 R + + ++ IF+L E S IA+ LN K +G + S Sbjct: 170 VIDEYGKTRKRYAVNHAEAIIVKEIFRLYAEGLSFKKIAESLNQKGYKTKNG--GKFKAS 227 Query: 236 VIEKLLANKALIGICVPSYRARGKGIS-------EIAGYYPRVISDDLFYAVQEIRLAPF 288 I ++L NK GI + + G I ++ G P +I DLF VQE +L+ Sbjct: 228 SISEILRNKKYGGIYIYNQSKHGTRIRSEHDDVIKVEGAVPTIIDRDLFDKVQE-KLSKR 286 Query: 289 GISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCP------MRRLHRCDRP 342 + K+ L L + C ACG+ + SG + Y+C +L + Sbjct: 287 RRNIQKKHHYL---LLNIAYCGACGSRL---TGSGGKYPKYICQDWKNKKSTKLVSIGKT 340 Query: 343 SIKRDLVDYNIINELLFNCSKIQPVENKKDANET--------------LELKIIELQMKI 388 +++ ++ Y I LL + KI + K+ N+T L++K +L+ KI Sbjct: 341 KLEKQVISY--IKNLLLSIDKIDFSKLTKELNKTEAKREQLYEKQFKELQMKKSDLENKI 398 Query: 389 NNLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSD 435 NNL+ A+ + + ++ + L+ EL + + +K L +K +N +++ Sbjct: 399 NNLVRAIEKGILIEKLEKEAKDLEIELNKVNQEIKNLHNKTINKYTE 445 >UniRef50_D1AQX9 Recombinase n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AQX9_SEBTE Length = 496 Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 94/365 (25%), Positives = 162/365 (44%), Gaps = 42/365 (11%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 MKKA+ Y RFSS Q S S++ Q R I ++ N+ L T TY D +S G A S Sbjct: 1 MKKAVIYARFSSDNQRSV-SIDAQIRAIRDYCSKNN--ILVTDTYIDEAIS---GTSANS 54 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 FL IE ++V LDR +R +A KL N + +I++ Sbjct: 55 RV--HFLKMIEDSSKNNFDYVVVHKLDRFARNSYDQAYYEKKLNDNR-VKIISV------ 105 Query: 121 NIDSLNEP--YSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWL 178 ++ N+ + ++K ++ + NE + SR KK + + + P L Sbjct: 106 -LEQFNDSPEHVILKGVITS--MNEYYSLNLSR---ETKKGLYENFYNCQHASGMPPLGL 159 Query: 179 SLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIE 238 +D + +V + + K + LIF+L +E I+ +LN N ++ +G I Sbjct: 160 DVDKETRKYVINEEEAKIVRLIFRLSLEGNGYAFISNFLNKKGYLN--KRKRPFGKGGIR 217 Query: 239 KLLANKALIG---ICVPSYRARGKGISEIA-GYYPRVISDDLFYAVQEIRLAPFGISNSS 294 +L N+ IG + + + + G +I G P +I + FYAVQ+I I++ Sbjct: 218 DMLLNEKYIGNYILGKKNKKGQLTGREKIQEGVIPAIIDKETFYAVQDI--FKNRIASKK 275 Query: 295 KNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGY------YVCPMRRLHRCD--RPSIKR 346 N + LL KC CG + ++ +G + G Y C R+ + D P I++ Sbjct: 276 SNAKVDYLLTGFCKCGECGGS---YSGAGKIKGRSKQYDSYGCTSRKSKKTDCINPKIRK 332 Query: 347 DLVDY 351 +++++ Sbjct: 333 EVLEH 337 >UniRef50_C4F8C7 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F8C7_9ACTN Length = 472 Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 107/466 (22%), Positives = 198/466 (42%), Gaps = 64/466 (13%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 +K+A+ Y RFS Q S++ Q R+ EW + + Y Y D +S G+ Sbjct: 4 VKRAVIYARFSCSKQREA-SIDDQLRVCREW--CDREGYEVVREYSDYAMS---GRSDDR 57 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 F E + I+ LV +DR SR + I + K + HG++V++ Sbjct: 58 PQFQEMIANAGESDIV-----LVYMMDRFSRSEYDAPIYK-KELAKHGVEVVSA------ 105 Query: 121 NIDSL-NEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 +++L + P ++ + A ES S RVK L +G + + + Sbjct: 106 -MEALPDGPEKILIEKIYEGLAAVESAKTSIRVKRGMGGNALKCLTNGVRIYG----YRT 160 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEK 239 +D R F DPD + ++ +K+R+ ++N I L + VKN +G A ++ K Sbjct: 161 AEDGR--FEIDPDAAENVKWAYKMRLRGIAVNQIGTMLAERGVKNSTG--GACNYNLARK 216 Query: 240 LLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPML 299 +L+++ G+ + I G P++I F QE+R S + Sbjct: 217 ILSDERYTGVYIWD-------DVRIEGGMPQIIDRGTFMEAQEVRSRKCRADESWGD--- 266 Query: 300 INLLRTVMKCEACGNTM---IVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINE 356 L+ C CG ++ + G + YY CP +C + +I+RDL++ I++ Sbjct: 267 -YALKGKALCGECGRSLQGISGYGNKGVRYEYYSCP----GKCQK-NIRRDLLEGEIVHA 320 Query: 357 L----------LFNCSKIQPVENKKDAN---ETLELKIIELQMKINNLIVALSVAPEVTA 403 L + + +++ K N E + + + + + NL+ A+ V Sbjct: 321 LRSMLSDRSTAMMIARALCGLQSHKALNIEKERAQKSLSDAEKSLKNLLSAVEQGIIVPG 380 Query: 404 IAEKIRLLDKELRRASVSLKTLKSKGVN--SFSDF--YAIDLTSKN 445 E+I+ L+ + RA L++ +S+ V+ F+DF Y +L +N Sbjct: 381 TKERIQELEAQKMRALRDLESAQSEEVDPEGFADFLMYGEELDDRN 426 >UniRef50_A7VUQ9 Putative uncharacterized protein n=2 Tax=Clostridium leptum DSM 753 RepID=A7VUQ9_9CLOT Length = 514 Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 113/455 (24%), Positives = 189/455 (41%), Gaps = 79/455 (17%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYED-LGLSAFKGKHAQSG 61 + AY R SS S D LN +A YY D I +D + A SG Sbjct: 18 RVAAYARVSSD---SADQLNSFATQVA--------YYTDFIQSKDEWEFAGLYADEAVSG 66 Query: 62 A-------FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITL 114 F L G I +LV+S+ R +R + + ++ ++ + G+ V Sbjct: 67 TTADKRDDFQRLLADCRAGKI---DRILVKSISRFARNTL-DCLQTVRELKQLGVAV--- 119 Query: 115 CDNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASC 174 + ID+ N ++ +IL A EES S +K S++++ ++SG +T+ Sbjct: 120 -EFEKEGIDTGNMGSEMLLSIL-GSAAQEESLSISKNLKWSYRRR----MKSGDFITSK- 172 Query: 175 PRWLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGP 234 L K VP+P V +E IF + + + IA LN +K W Sbjct: 173 -DLLGYFFKNNTLVPNPKEVPIVEYIFNSYLSGKGTDEIADELNAANLKTDKKPSGRWHS 231 Query: 235 SVIEKLLANKALIGICV----------PSYRARGKGISEIAGYY-----PRVISDDLFYA 279 ++I +L+N+ IG + P + R G E++ YY P +IS + F A Sbjct: 232 TMIRYILSNEKYIGDSLVQKRYTPEDLPLRQKRNNG--ELSQYYIQNSHPAIISRETFEA 289 Query: 280 VQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHR- 338 VQ++ L + M LR+ M+C CG+ H +G ++ C + R + Sbjct: 290 VQQL-LNRRRKRHPPSVEMQQTPLRSTMQCALCGSYFHKHKSNG--ENFWFCALHRKSKD 346 Query: 339 -CDRPSIKRD---LVDYNIINELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVA 394 C P+I+ + ++ N+LL N D T+ +++ELQ K + Sbjct: 347 LCPMPNIREQEILMAFLSMYNKLLDNI----------DILSTMMNQLLELQAK------S 390 Query: 395 LSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKG 429 + P++ + EKI EL + SL L++KG Sbjct: 391 VCSRPDIMDLNEKI----SELVTQNHSLSRLQAKG 421 >UniRef50_C0FPH3 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0FPH3_9FIRM Length = 556 Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 88/374 (23%), Positives = 160/374 (42%), Gaps = 52/374 (13%) Query: 3 KAIAYMRFSSPGQMSG--DSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 KA AY+R S S DS++ QR+LI +++ N D + + +D + G Sbjct: 17 KATAYIRLSYTDDHSSESDSVSNQRKLIENFVERNPDIEVVSEKIDD----GYSGIIFDR 72 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 AF E + + G I ++V+ L RL RE + ++ +G+ I + D+ Sbjct: 73 PAFKEMMQDVTDGNI---NCVIVKDLSRLGREYIETGRYLRRVFPAYGVRFIAITDSIDT 129 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 DS ++ +K I+ + S IK+ R L K++ D + + + ++ Sbjct: 130 AHDSSDDLTVSVKNIMNEAYCRDIS-IKT-RTSLDVKRRNGDFVGAFPVYG-----YMKA 182 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLN----------------DHAVKN 224 +D + VPDP + + IF++R+E S + IA LN +A K Sbjct: 183 EDNKNLLVPDPYAARVVCDIFRMRLEGASASKIASELNRLGILSPLAYKKNNGLPYAKKG 242 Query: 225 FSGK-ESAWGPSVIEKLLANKALIGICV------PSYRAR---GKGISE---IAGYYPRV 271 ++ K + W + I ++L ++ G V P Y+ + + SE + + + Sbjct: 243 YADKADCKWSATTIIRILQDETYTGTLVQGKQGTPHYKIKQMEQRPASEWVRVPDAHEAL 302 Query: 272 ISDDLFYAVQEIRLAPFGI-SNSSKNPMLINLLRTVMKCEACGNTMI--VHAVSGSLHGY 328 I+ F VQ I+ G+ + +S N + L ++ C CG+ M + +G + Y Sbjct: 303 IARQDFDLVQRIK----GLDTRTSPNEDTVYLFSGILICGCCGSRMTRKTNRANGKEYHY 358 Query: 329 YVCPMRRLHRCDRP 342 Y CP + C P Sbjct: 359 YYCPTGKKKGCAHP 372 >UniRef50_B5IKH1 Recombinase, putative n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IKH1_9CHRO Length = 627 Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 71/253 (28%), Positives = 114/253 (45%), Gaps = 12/253 (4%) Query: 2 KKAIAYMRFSSPGQMS-GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 ++ +Y R SS Q G+ L RQ W + DT+ D G SA KG H + Sbjct: 6 RRCFSYARVSSGHQAQLGEGLQRQLAQAEAWAAAHDLVLDDTLDLIDPGRSASKGHHIRE 65 Query: 61 G-AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERL-KLILNHGIDVITLCDNT 118 G A FL A + G + LL+E RLSR + +A++++ ++ G++++TL D Sbjct: 66 GAALHRFLAAAKAGTLGSSPVLLIEDFTRLSRLEPLDALDQIVSPLVRSGVEIVTLEDGA 125 Query: 119 VYNIDSLN-EPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRW 177 Y +D LN +P L+ ++ AQ A E + SS + R D L+ + T P W Sbjct: 126 SYTLDRLNRDPACLLILVVKAQSAAEYARRLSSYITQRRAANRADILDGKPVCTGWAPSW 185 Query: 178 L--SLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPS 235 + + + +R F P T+ + +L E + + LN ++ G W Sbjct: 186 IEWNAEGQRWQFTP---YASTVRRLVELSWE-HGTTVVCRTLNAEGHRSPDGLP--WSQM 239 Query: 236 VIEKLLANKALIG 248 I +L N AL G Sbjct: 240 PIRAILRNPALHG 252 >UniRef50_C4ZFI3 Site-specific recombinase n=3 Tax=Clostridiales RepID=C4ZFI3_EUBR3 Length = 563 Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 97/380 (25%), Positives = 163/380 (42%), Gaps = 63/380 (16%) Query: 11 SSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFSEFLDAI 70 SS ++ +S++ Q+ LI ++LK D + ++ +D + G + + AF L+ I Sbjct: 25 SSSAKLESNSISNQKALILDFLKDKKDIEVVSVRVDD----GYSGSNFERPAFQAMLEDI 80 Query: 71 EHGYILPGTTLLVESLDRLSREKV--GEAIERLKLILNHGIDVITLCDNTVYNIDSL--- 125 HG + ++V+ L R RE + G+ IERL L G+ I + DN DSL Sbjct: 81 RHGIV---DCVVVKDLSRFGREYIDSGKYIERLFPAL--GVRFIAINDN----YDSLKGK 131 Query: 126 NEPYSLIKAI--LIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDK 183 N+ +I LI + IK R L K+K+ + + T A R D Sbjct: 132 NQADEIIIPFKNLINDAYCRDISIKI-RSNLEIKRKKGECV---TPFVAFGYRKTKTDKH 187 Query: 184 RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAV---------------KNFSGK 228 + DP ++ IFK++++ S +AIA LN+ + F K Sbjct: 188 KLEI--DPSAGGVVQDIFKMKLQGMSQDAIANRLNELGILSPFEYKISSGSRYETGFRQK 245 Query: 229 ESA-WGPSVIEKLLANKALIGICV------PSYRARGKGIS------EIAGYYPRVISDD 275 E A W + ++L N+ IG V P+++ + + I + ++SD Sbjct: 246 EQALWSSVTVRRILENEVYIGNLVQGKRTTPNHKVKQTYVKPEDDWIRIEKNHEPLVSDR 305 Query: 276 LFYAVQEIRLAPFGI-SNSSKNPMLINLLRTVMKCEACGNTMI--VHAVSGSLHGYYVCP 332 F VQ + G+ + +S + + LL + C CG M V V+G + YY+C Sbjct: 306 DFEIVQRL----LGMDTRTSPDQKQVYLLSGIAVCADCGAPMTRKVSTVAGKKYAYYLCS 361 Query: 333 M-RRLHRCDRPSI-KRDLVD 350 + RC I ++DL D Sbjct: 362 TNKETKRCSSHRIPEKDLED 381 >UniRef50_C1XY58 Site-specific recombinase, DNA invertase Pin n=2 Tax=Meiothermus RepID=C1XY58_9DEIN Length = 515 Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 110/463 (23%), Positives = 194/463 (41%), Gaps = 65/463 (14%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 +++ Y R S+ Q+ SL Q+ ++ W V Y TY D G + G Sbjct: 15 VQRCALYTRVSTEEQVERYSLEAQQEVLTRWAGVLG--YEVAATYTDPG---YSGAQEDR 69 Query: 61 GAFSEFL-DAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 A + L DA E +++ +LV LDRL+R KV A + ++ + G+ +++ Sbjct: 70 PALTRLLADAQEGRFVV----VLVYRLDRLAR-KVRLAYDLIERLERCGVGLMS------ 118 Query: 120 YNIDSLNEPYSLIKAIL--IAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRW 177 Y+ ++N S+ KA+L +A A E + + R +L K A G + P Sbjct: 119 YSEPNINTTTSIGKAVLGIMAVFAEWERDTFAERSRLGMHK----AARMGKYLGGIVPYG 174 Query: 178 LSLDDKRTAFVPDPDRVKTIELIFKLRMERR-SLNAIAKYLNDHAV--------KNFSGK 228 +++D R A P P+ ++ +F ER S +A+ LN + + GK Sbjct: 175 YTVEDGRLA--PLPEEAAVVQQMFAWVAERGWSTERVAQELNRLGIPPKYRREGRGVRGK 232 Query: 229 ESA--WGPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQE--IR 284 +A W + ++L N+ IG V R R ++ P ++ LF A QE R Sbjct: 233 RTAGVWRGGGVLRILKNRTYIGEYVYGKRTRKPQPELVSVPVPPLVEPVLFEAAQEQLSR 292 Query: 285 LAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLH------- 337 A F + N+ + LL+ +++C CG + A GYY C R Sbjct: 293 NALFALRNARS----VYLLKGLIRCGMCGRAYVGSA------GYYACVGRTNRQASPIPE 342 Query: 338 -RCDRPSIKRDLVDYNI---INELLFNCSKIQPVENKKDANETLELKIIE------LQMK 387 RC P ++R ++ I I L N + +++ E+ E+ ++E L+ + Sbjct: 343 MRCTAPHVRRGELEERIWHDIRSFLLNPGEALQAFINEESPESNEVSLLERRLQALLEAR 402 Query: 388 INNLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGV 430 L + L E ++ LD +R VS++ + + + Sbjct: 403 ARLLDLYLEGGVEKETYYARLEDLDTRVREVQVSVEAARQRSI 445 >UniRef50_C5VNM7 Site-specific recombinase, resolvase family n=1 Tax=Clostridium botulinum D str. 1873 RepID=C5VNM7_CLOBO Length = 528 Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 101/404 (25%), Positives = 166/404 (41%), Gaps = 50/404 (12%) Query: 7 YMRFSSPGQMSGDSLNRQRRLIAEWL--KVNSD----YYLDTITYEDLGLSAFKGKHAQS 60 Y R S+ + +S+ Q + + +WL K ++D Y L I Y+D G F G + + Sbjct: 10 YTRVSTDKKEQSESIPAQIQSLKKWLIEKSSNDKEQIYKLQQI-YKDQG---FSGSNFKR 65 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 +F + IE+G I +L L R +R + N G+ +++ DN Sbjct: 66 ESFIKMKKDIENGKI---NMVLTRDLSRFARNYITAGYYLEDYFKNKGVRFVSVLDN--- 119 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 +D+++E ++ I + + +R L + R ++ S + Sbjct: 120 -VDTIDEVDDIVPFKNILNEMYIKDCSRRTRDGLKQRMIRGSSIASRPLYGYKFHEVHDE 178 Query: 181 DDKRTAFVPDPDRV-KTIELIFKLRMERRSLNAIAKYLNDHA-------VKNFS-GKESA 231 + K +P D K ++ IF+L ++ + IA YLND +KNFS K Sbjct: 179 NVKIIKLIPREDETTKVVKKIFELYIQGFGMGRIATYLNDKGIAPPSALIKNFSRSKFKL 238 Query: 232 WGPSVIEKLLANKALIGICVP------SY-----RARGKGISEIAGYYPRVISDDLFYAV 280 W + I +L N GI V SY R K I G + ++S + F V Sbjct: 239 WNNNTIRSILTNPKYAGIMVQGRWRKVSYKINKVRPTPKDQWIIGGEFKGIVSKETFEIV 298 Query: 281 QE-IRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRL--H 337 QE I+ G + N +L V+KC CG +M + G G Y C ++ Sbjct: 299 QELIKKRSKGFRHKGGNT---HLFSGVLKCNECGGSM---SYRGDFKG-YKCTNSQMGGG 351 Query: 338 RCDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLELKI 381 RC SIK + + I ++ N K+ NKK+ ELK+ Sbjct: 352 RCIAHSIKEEYLIKKIKEDIKRNIYKLN---NKKNFYNLAELKV 392 >UniRef50_UPI0001BC4A50 recombinase n=2 Tax=Fusobacterium RepID=UPI0001BC4A50 Length = 537 Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 90/346 (26%), Positives = 148/346 (42%), Gaps = 40/346 (11%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 ++A+ Y RFSS Q +S++ Q R I ++ K N+ Y Y+D G+S K +S Sbjct: 3 RRAVGYCRFSSDSQRE-ESIDAQLRAIRDFCKQNN--YDLIKVYKDEGISGTSTKDRES- 58 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 FL IE ++V DR +R + AI K++ ++ + ++++ Sbjct: 59 ----FLQLIEDSKKNMFDYVIVHKFDRFARNRYDHAIYE-KILNDNKVKLLSV------- 106 Query: 122 IDSLNE-PYSLI-KAILIAQRANEESEIKSSR-VKLSWKKKRQDALESGTIMTASCPRWL 178 ++ LN+ P S+I K++L NE + SR +K + A+ + I P Sbjct: 107 LERLNDSPESIILKSVLTGM--NEYYSLNLSREIKKGLNENALKAMHTCGI----PPLGY 160 Query: 179 SLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIE 238 LD+ R ++ + + + LIF L + +IA+ LN+ + KN G+E + + I Sbjct: 161 DLDENRR-YIINEKEAEAVRLIFSLAADGIGFASIARTLNERSYKNKRGRE--FKKTSIR 217 Query: 239 KLLANKALIGICVPSYRARGKGISE----IAGYYPRVISDDLFYAVQEIRLAPFGISNSS 294 L N+ IG S + R I +P +I LFY VQ Sbjct: 218 DTLLNQKYIGTYFHSLKNRDGTFRRDPILIENAHPAIIEKSLFYKVQTRFKNHLKGPRDR 277 Query: 295 KNPMLINLLRTVMKCEACGNTM-----IVHAVSGSLHGYYVCPMRR 335 KN L +C CG + H + GS+H Y C RR Sbjct: 278 KNTTY--YLTGFCRCGECGGSFSGGYRSAH-IDGSVHYGYECRKRR 320 >UniRef50_B2V2D8 Putative resolvase n=2 Tax=Clostridium RepID=B2V2D8_CLOBA Length = 563 Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 88/350 (25%), Positives = 149/350 (42%), Gaps = 45/350 (12%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 MKK+ Y+R S+ Q+ DSL Q++ + + S Y L+ YE + + GK+ Sbjct: 1 MKKSALYIRVSTHYQIDKDSLPFQKKELINY----SKYILNIDEYEIFEDAGYSGKNTVR 56 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVG--EAIERLKLILNHGIDVITLCDNT 118 AF + + I+ G T LLV +DR+SR + E LK + + N Sbjct: 57 PAFQDMISRIKKG---EFTHLLVWKIDRISRNLLDFCAMYEELK-----KYNCTFISKNE 108 Query: 119 VYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWL 178 ++ S +++K +LI A E ++ S RV + L +G A CP Sbjct: 109 QFDTSSATGE-AMLKLVLIF--AELERKLTSERVSAIMLDRANKGLWNG----AQCPLGY 161 Query: 179 SLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIE 238 S ++++ + D +TI+LI+ S +AK LN +K + ++ W + Sbjct: 162 SWNEEKKFPDINKDESETIKLIYNTYENISSSLQVAKMLNSEHIK--TKRDGKWSSKTVS 219 Query: 239 KLLANKALIGICVPSYR--ARGKGISE-----IAGYYPRVISDDLFYAVQEIRLAPFGIS 291 ++ N G +YR ARGK E + + +IS + + +I Sbjct: 220 DIIRNPFYKGTYRYNYRESARGKIKDESEWIIVEDNHSPIISKEQWEHCNKIMDI----- 274 Query: 292 NSSKNPML------INLLRTVMKCEACGNTMI----VHAVSGSLHGYYVC 331 N+ +N L I++ +++KC+ CG T I V G YY C Sbjct: 275 NAQRNTSLYRKNSNIHVFASLIKCKKCGETFIANCDVTRKDGYRPSYYYC 324 >UniRef50_C6JB72 Resolvase domain-containing protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JB72_9FIRM Length = 581 Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 101/434 (23%), Positives = 182/434 (41%), Gaps = 74/434 (17%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 K Y+R S+ Q+ DS+ Q++ + + ++ L T YE + + GK+ A Sbjct: 19 KVAIYIRVSTIHQVDKDSIPMQKKDLIAYCQL----ILGTDNYEIFEDAGYSGKNTDRPA 74 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSRE--KVGEAIERLKLILNHGIDVITLCDNTVY 120 F + I G T +LV +DR+SR E E L+ + V + N + Sbjct: 75 FQNMMGRIRKGEF---THVLVWKIDRVSRNLLDFAEMYEELR-----SLRVTFVSKNEQF 126 Query: 121 NIDS-LNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 + + + E +++K IL+ A E + S RV + + SG P S Sbjct: 127 DTSTAIGE--AMLKIILVF--AELERNMTSERVTATMISR----ANSGQWNGGRIPFGYS 178 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEK 239 D K F D + L + RSL +++ LN+ K +G +W P + Sbjct: 179 YDPKEKVFSIREDEASICRELKDLYLLNRSLVYVSRALNEKGYKTRAG--VSWSPHSVWI 236 Query: 240 LLANKALIGICVPSYR-ARGKGISE-----------IAGYYPRVISDDLFYAVQEIRLA- 286 + ++ GI YR R KG+ I ++P + + + A++ I + Sbjct: 237 IASSPFYAGI----YRYNRYKGVESRTINPEEEWVMIQNHHPAIFTLEEHQAMRSIMKSN 292 Query: 287 -------PFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLH--GY----YVCPM 333 P + S+K ++ + +M C+ CG+ M+ + G LH GY Y CP+ Sbjct: 293 QRNMDNLPGRVHLSTKT----HIFQGIMYCDKCGSKMV--STPGRLHVDGYRTSNYGCPL 346 Query: 334 RR-LHRCDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLELKIIELQMKINNLI 392 RR +C+ P++ ++ +IN +L N +A +T I ++N + Sbjct: 347 RRNTKKCNNPTVNDIIIGEFVINYIL----------NMLNAKKTFS--TINTPDELNAAL 394 Query: 393 VALSVAPEVTAIAE 406 ++ SV EV+++ E Sbjct: 395 LSGSVFSEVSSVEE 408 >UniRef50_Q5WE11 Site-specific recombinase for integration and excision n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WE11_BACSK Length = 467 Score = 68.2 bits (165), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 88/374 (23%), Positives = 147/374 (39%), Gaps = 62/374 (16%) Query: 1 MKKAIAYMRFSSPGQMS-GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 M+ A+ Y+R S+ Q++ G S++ QR + + + S + Y D G+SA K+ + Sbjct: 1 MRTAV-YIRVSTEEQVNEGYSISAQRERLQAY--ITSQNWDAVGFYVDEGVSA---KNTE 54 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 L IE G+I +LV LDRL+R +D+ L D Sbjct: 55 RPQLKRMLKHIEEGFI---DVVLVYRLDRLTRSV---------------LDLYQLLDTFE 96 Query: 120 YN---IDSLNEPYSLIKAI------LIAQRANEESEIKSSRVKLSWKKKRQDALESGTIM 170 N S E Y A+ L+A A E E RV++ ++ ++ G Sbjct: 97 RNGCKFKSATEVYDTTTAMGRLFITLVAALAQWERENLGERVRMGMTQRTREGQWHG--- 153 Query: 171 TASCPRW--------LSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAV 222 S P + +S+DD++ V I+ +E S +A LN+ + Sbjct: 154 --SSPAYGYKYENGIVSIDDEKANIV---------RWIYMSYIEGMSDRKLAVKLNEQGI 202 Query: 223 KNFSGKESAWGPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQE 282 G AW S I ++L N+ G + R + + G P++I +F Q Sbjct: 203 PTQKG--GAWRESTIRRILQNETYTGKLMWGVRVNKENAFSVDGAMPKIIEQGIFEKAQS 260 Query: 283 IRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVS--GSLHGYYVCPMRRLHRCD 340 IR + + ++ ++C CG M H + G + Y C R H CD Sbjct: 261 IRKGRARV--HPRQATSKHIFSGALRCARCGAAMKGHKKTDKGKEYRSYRCINRYNHTCD 318 Query: 341 RPSIKRDLVDYNII 354 P I + +++ I Sbjct: 319 MPMISQKILEKTFI 332 >UniRef50_B0P5W1 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P5W1_9FIRM Length = 639 Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 55/183 (30%), Positives = 81/183 (44%), Gaps = 28/183 (15%) Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 DD R A P D + + IF S IA LN +K GK AWG + L Sbjct: 176 DDLRYALDPPNDEI--VREIFSRTACGDSFADIAADLNARGIKTSRGK--AWGKNSFHAL 231 Query: 241 LANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPM-- 298 L N+ G+ + G I G P+++ LF+ VQE+ + KNP Sbjct: 232 LTNERYTGVYI-------YGDIRIEGGVPQIVDKGLFFRVQEV-------LKTKKNPQGR 277 Query: 299 -LIN---LLRTVMKCEACGNTMIV---HAVSGSLHGYYVCPMRRLHR-CDRPSIKRDLVD 350 IN LL + C C + M +G LH YY+C RR+ + CD+ +I+RD ++ Sbjct: 278 HRINGDYLLTGKLFCGHCKSPMAGISGTGKNGKLHHYYICQKRRMEKSCDKANIRRDKIE 337 Query: 351 YNI 353 + + Sbjct: 338 HEV 340 >UniRef50_C1I4H9 DNA integration/recombination protein n=4 Tax=Clostridium RepID=C1I4H9_9CLOT Length = 526 Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 98/431 (22%), Positives = 183/431 (42%), Gaps = 59/431 (13%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 +K+A AY+R+SS Q +SL Q R I E+ YE + + K K A + Sbjct: 9 IKRACAYIRYSSDNQRD-ESLEAQIRAIKEFGYAKG--------YEIVKVYQDKAKSATT 59 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 F I+ ++V LDR SR+K A + KL N G+ ++++ + Sbjct: 60 DRRPGFQQMIKDSANDIFDVVIVHKLDRFSRDKYDSAQYKRKLKQN-GVKLVSVTE---- 114 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 N+D + P S+I +I A S+ + V K+ A +G + P + Sbjct: 115 NLD--DSPESVILESVIEGMAEYYSKNLAREVMKGMKETAYQAKHTGGL----PPLGYDV 168 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 + ++ +V + +++ LIF++ R +L+ + LN K +G + + + I + Sbjct: 169 NAEKK-YVINEREAESVRLIFEMYTARYTLSQMVDELNSRGFKTKAG--AIFKHNSINSV 225 Query: 241 LANKALIGICVPSYRARGKG--------------ISEIAGYYPRVISDDLFYAVQEIRLA 286 L N+ G+ + + A+ I I G P++I +L+ QEI L Sbjct: 226 LTNEKYTGVYIFNKSAKKDAYGRRNSHLQKDQSEIIRIEGGMPQIIDKELYEKAQEI-LR 284 Query: 287 PFGISNSSKNPMLINLLRTVMKCEACGNTMI---VHAVSGSLHGYYVCPMRRL---HRCD 340 S + LL ++KC CG M A S L+ Y C R+ + C Sbjct: 285 SRKKSKAVNKAKESYLLSGIIKCGECGYAMYGNRRQARSKPLYVSYRCGCRKRTSSNVCS 344 Query: 341 RPSIKRDLVDYNIINEL---LFNCSKI------------QPVENKKDANETLELKIIELQ 385 I+++ ++ ++ EL +FN I + E +D +E ++ +++ Sbjct: 345 NKEIRKEYIEEYVLAELEERIFNDKSIPLLVEGINEELKKQSEGDEDKRGIIEKELKDIE 404 Query: 386 MKINNLIVALS 396 +I N+++A++ Sbjct: 405 KQIGNIVMAIT 415 >UniRef50_C2FUQ8 Site-specific recombinase (Fragment) n=2 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FUQ8_9SPHI Length = 492 Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 92/342 (26%), Positives = 145/342 (42%), Gaps = 42/342 (12%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 MK+AI Y+RFS GQ +G S+ RQ +WLK N +DT D G SA Sbjct: 1 MKRAIRYLRFSQLGQSNG-SIERQELYTDQWLKFNDVELVDTFI--DRGKSARTFDRPDF 57 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILN-HGIDVITLCDNTV 119 EF+ +H + LLV+ LDR SR+ GEA+ +KL+ + I V+++ + V Sbjct: 58 IKLREFI--TKHHRTV--DYLLVDQLDRFSRD-AGEAMSMVKLLQQKYSIQVVSVTEGIV 112 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 ++ D+ P S +A L A E++ +S +VK + + G + + P Sbjct: 113 FDYDT---PGSFFRAGLQLLLAEEDNINRSIKVKGGIYTAKA---KEGRYVYKNAPFGYR 166 Query: 180 LDDKRTA--FVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVK-NFSGKESAWGPSV 236 +R + + K + I+ + L I + A + F K G Sbjct: 167 KQGERKERRLIIEETEAKIVRFIYDAYLRDTPLYLI----KEQAQRLGFPTK----GNMA 218 Query: 237 IEKLLANKALIGIC-VPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSK 295 IE++L N G+ V +Y+ G+ G + ++ + VQE P K Sbjct: 219 IERVLKNPTYAGLLKVETYKDYAGGL--FDGIHEPIVDKTTWMMVQEKMKRP------EK 270 Query: 296 NPMLIN---LLRTVMKCEACGNTMI---VHAVSGSLHGYYVC 331 +I+ LR V+KC CGN + SG YY C Sbjct: 271 TRTVIDDEIPLRGVLKCH-CGNPLSGAPSRGKSGKYFYYYKC 311 >UniRef50_B0K4R6 Recombinase n=9 Tax=Clostridia RepID=B0K4R6_THEPX Length = 506 Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 119/513 (23%), Positives = 212/513 (41%), Gaps = 63/513 (12%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 +A AY R+SS Q +S+ Q R I E+ + N+ + T E K A + Sbjct: 7 RAAAYARYSSDNQRE-ESIEAQLRAIKEYCEKNNIQLVKIYTDE--------AKSATTDD 57 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 FL I+ + ++V LDR +R + A R +L N G+ +I++ + + Sbjct: 58 RPAFLQMIKDSSLGLFNAVIVHKLDRFARNRYDSAFYRRQLKKN-GVKLISVLEQ----L 112 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 D + P S+I ++ A S+ + V K+ A +G I P + D Sbjct: 113 D--DSPESIILESVLEGMAEYYSKNLAREVMKGLKENAFQAKFNGGI----PPLGYDIVD 166 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 ++ +V + + + LIF+L + I LN + G + + + I ++L Sbjct: 167 EK--YVINEKEAEAVRLIFELYAQGYGYRHIIDELNLRGYRTKKG--NPFSKNSIHEILK 222 Query: 243 NKALIGICV------PSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKN 296 N+ IG + ++R + + I P +I DLF VQ+ ++ I+ + + Sbjct: 223 NEKYIGKYIFNKGTKKNHRMVKEDVIVIDNAIPAIIDKDLFEQVQK-KIEERKITRGANS 281 Query: 297 PMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINE 356 + LL ++ C C + M+ G Y R +C I ++ ++ +I+E Sbjct: 282 AKRVYLLSGLVYCGICDSKMVGCLSRGKYVTYRCSRKDRTKQCTNRDINKEKLEAFVIDE 341 Query: 357 LLFNC--SKIQPV-------ENKKDANETLE--------LKIIELQMKINNLIVALSVAP 399 L K+ PV EN+K E +E K +E QMK N++ A++ Sbjct: 342 LNKRVLDPKVAPVLAKLLNEENQKLNKERVEEITLLKKRYKEVEEQMK--NIVEAIAQGM 399 Query: 400 EVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSF-----------SDFYAIDLTSKNGRE 448 + EK+ L+ + +K L++K SF D I+ +SK+ E Sbjct: 400 FQPIMKEKMNELEAMRNELAYRIKELENKKETSFITPEMILKIFEKDREIIN-SSKDPHE 458 Query: 449 LCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFK 481 + L +KII+ D C+ YF G F+ Sbjct: 459 IKEVLK-NYIKKIIVTPDEIKCEFYFWIGDDFR 490 >UniRef50_UPI00016C576E recombinase-related protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C576E Length = 426 Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 6/176 (3%) Query: 140 RANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDKRTAFVPDPDRVKTIEL 199 R N +S +K+ R +W++K+++A E GT TA P WL L + V PD K ++ Sbjct: 4 RGNSDSAMKAERCGKAWREKKKEAREEGTPTTAMLPAWLELYGGK--IVTKPDAAKAVKR 61 Query: 200 IFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLANKALIGICVP-SYRARG 258 +++L + I K L + GK W S + LL + ++G P + R Sbjct: 62 VYELCVAGYGHLGICKKLAEEGHAPI-GKSGQWVRSYVAHLLTCRQVLGEYQPIVKKTRK 120 Query: 259 KGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGN 314 + I YYP V++++L++ Q + G + N +M C A GN Sbjct: 121 PDGNPIPNYYPAVVTEELYHQAQHAKSLRDGTTGRPPTRTNFNYFTGLM-CRA-GN 174 >UniRef50_C6JGM7 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGM7_9FIRM Length = 535 Score = 64.7 bits (156), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 93/423 (21%), Positives = 190/423 (44%), Gaps = 65/423 (15%) Query: 5 IAYMRFSSPGQM---SGDSLNRQRRLIAEWLKVNSDYY-LDTITYEDLGLSAFKGKHAQS 60 + Y+R S + +S+ QR +I +++ +++ + + ++D G S G + Sbjct: 8 VKYLRLSLEDEDMLDESNSITNQRIVIGQYIASKNEFKNTEVLEFKDDGYS---GTNFDR 64 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSRE--KVGEAIERLKLILNHGIDVITLCDNT 118 F ++ + G + +T++V+ L R R +V +E++ +N + I + DN Sbjct: 65 PGFQSMMELVRDGKV---STIIVKDLSRFGRNHIEVDTYLEQIFPFMN--VRFIAINDN- 118 Query: 119 VYNIDSLNEPYSLIKAILIAQRA--NEESEIKSS-RVKLSWKKKRQDALESGTIMTASCP 175 +DS+ S + I + R NE I +S +VK + ++++ +G M A P Sbjct: 119 ---VDSMKYE-SGMPGIDVGFRNIINEHHSIDTSVKVKRTLIQRQK----AGKYMGARAP 170 Query: 176 R-WLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDH-------------- 220 +L D+ T+ V +P+ +++IF+ ++ ++ +A+YLN+ Sbjct: 171 YGYLKPDEDVTSLVINPETAPVVKMIFQKYLDGMNITQLARYLNEQKIMSPGQYKREVLK 230 Query: 221 -AVKNFSGKESAWGPSVIEKLLANKALIGICVPS-YRARGKGISE-----------IAGY 267 VK + K W P + +L + G + ++ G ++ + G Sbjct: 231 TGVKKTTEK-YIWYPVTVRLILMTETYTGTTIGGKWKVASVGSNKHLKTKEEDWIVVEGT 289 Query: 268 YPRVISDDLFYAVQE-IRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLH 326 + ++S ++F AVQE + L S + N L+ ++KC CG + H + H Sbjct: 290 HEAIVSKEVFDAVQEKLELNSRKRSKTHNNNY---PLKGLVKCGGCGQNL-QHVTRCNPH 345 Query: 327 GYYVCPMRRLHRCDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLELKIIELQM 386 + CP R+ + ++ + +L D + NE++F K+ + DA LEL+ EL+ Sbjct: 346 --FKCP-RKFNVANQDCVTDNLYD-DEFNEMIFRAIKL-FAKISDDAEPVLELQKAELKS 400 Query: 387 KIN 389 K+N Sbjct: 401 KVN 403 >UniRef50_Q1J4R9 Site-specific recombinase n=10 Tax=Bacteria RepID=Q1J4R9_STRPF Length = 557 Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 102/409 (24%), Positives = 174/409 (42%), Gaps = 68/409 (16%) Query: 2 KKAIAYMRFSSPGQMS--GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 K A Y+R S S +S++ QR++I + + N D+ + Y D G F G + Sbjct: 4 KFACMYLRLSREDGDSTESNSISNQRQIIKSYARDN-DFKV-VAEYVDDG---FSGSNFD 58 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 F + + +E T++V+ L R R+ + K+ GI I++ DN Sbjct: 59 RPKFKKMIQDLEEKKF---KTIIVKDLSRFGRDYIESGKYLQKIFPEKGIRFISVNDN-- 113 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIK--SSRVKLSWKKKRQDALESGTIMTASCPRW 177 DS N S IL + +S + S +VK S + KR++ G + A P Sbjct: 114 --YDSENADVSDTHLILPIRNFINDSYCRDISMKVKSSKEIKRKN----GEFIGAFAPFG 167 Query: 178 LSLDDK-RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLN---------------DHA 221 D K + V D + IE IF ++++ S AIA +LN D+ Sbjct: 168 YKKDSKNKHKLVVDTEVSHIIERIFNMKIDGYSSKAIADFLNSIGCVTPSKHKENSGDNH 227 Query: 222 VKNFSGKESAWGPSVIEKLLANKALIGICVP------SYRA-RGKGISE-----IAGYYP 269 F K+S W ++ +++ NK IG+ +Y++ R ++E I + Sbjct: 228 TTGFIVKDSKWDAKMVNRIITNKVYIGVLEQGKTRKLNYKSKREVEVNEEDWIVINDSHK 287 Query: 270 RVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGY- 328 +IS ++ ++ L + S+ P ++L ++ C+ CG++M+ V S +GY Sbjct: 288 PIISKSIYALANKMMLRD--VKQSADIP---HILSGMLYCKDCGSSMVRRKVK-SKNGYN 341 Query: 329 --YVCP-MRRLHRCDRPSIKRD-LVDYNII---------NELLFNCSKI 364 Y+C C R SIK D L+D + NELL +K+ Sbjct: 342 IFYICSHYNNKGDCTRHSIKEDYLMDMTLFALKDYLKKYNELLSQVNKL 390 >UniRef50_UPI00019734DD site-specific recombinase n=1 Tax=Clostridium sp. M62/1 RepID=UPI00019734DD Length = 507 Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 89/370 (24%), Positives = 153/370 (41%), Gaps = 56/370 (15%) Query: 19 DSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFSEFLDAIEHGYILPG 78 DS+ QR+L+ ++LK + L + Y D G S G + AF + IE G + Sbjct: 31 DSVGNQRKLLMDFLKSEPELSLFS-EYVDDGWS---GTSFKRPAFERMIRDIEAGLV--- 83 Query: 79 TTLLVESLDRLSREKV--GEAIERLKLILNHGIDVITLCDNTVYNIDSLNEPYSLIKAIL 136 + V+ L RL R+ + G +ER + G+ I+L D IDS + Y ++ + Sbjct: 84 DCVAVKDLSRLGRDYIDTGRLLERY--FPDMGVRFISLADG----IDSRKQEYDML--LP 135 Query: 137 IAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDKRTAFVPDPDRVKT 196 I NE+ SR + + +Q A E I +C + + V D + Sbjct: 136 IKNIFNEQYARDISRKIHAVVRTKQKAGE--FIGAFACYGYRKSPSDKNRLVVDERAAEV 193 Query: 197 IELIFKLRMERRSLNAIAKYLNDHAV------KNFSGK----------ESAWGPSVIEKL 240 + +IF+L +E + N IA+ LND + K +G+ +S W S + K+ Sbjct: 194 VRMIFQLFLEGKGKNTIARMLNDRGIPCPSEYKRLNGENYRNGGRLSGQSCWTYSTVNKI 253 Query: 241 LANKALIGICVPS---YRARGKGIS-------EIAGYYPRVISDDLFYAVQEI---RLAP 287 L ++ +G V R RGK + G + +I ++ +++ R AP Sbjct: 254 LHSEMYLGNMVQGRRFQRMRGKARQVDRENWIVVEGTHEAIIDRQVWEQTRKLLKSRYAP 313 Query: 288 FGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRD 347 F + N+ ++C CG M+ L G YV + C +KR Sbjct: 314 FQPAAGE------NVFAGFIRCGDCGRAMVRKGRDRYLCGTYVRAGKAY--CSGHGVKRQ 365 Query: 348 LVDYNIINEL 357 ++ ++ EL Sbjct: 366 ELEEIVLAEL 375 >UniRef50_Q187J5 Site-specific recombinase n=2 Tax=Clostridium difficile RepID=Q187J5_CLOD6 Length = 501 Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 64/266 (24%), Positives = 118/266 (44%), Gaps = 29/266 (10%) Query: 81 LLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI-DSLNEPYSLIKAILIAQ 139 +LV +DRL R + + L +IT Y++ D +E YS +A + Sbjct: 77 VLVMDIDRLGRGNMQDQGLILDTFKKSKTKIIT--PRKTYDLNDEFDEEYSEFEAFM--- 131 Query: 140 RANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS---LDDKRTAFVPDPDRVKT 196 A +E ++ S R++ + + ++E G + + P L++K V + D+ Sbjct: 132 -ARKELKLISRRMQ----RGKIKSIEEGKFIAQAPPYGYDIKYLNNKERVLVINEDKATV 186 Query: 197 IELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLANKALIGICV----- 251 +++IF + ++ I+ YLN+ K +G+ W I ++ NK G V Sbjct: 187 VKIIFDMYLKGDGACKISNYLNELGYKTTTGR--TWYEKGIRDIIKNKVYCGYIVWNKVE 244 Query: 252 -PSYRARGKGIS---EIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVM 307 +R +GI E+ G + +IS+D++ Q IR I++ + N + N L ++ Sbjct: 245 RKRNSSRTRGIEEQIEVKGKHEPIISEDIWNKAQNIRKK--RINSPTPNNKITNPLAGIV 302 Query: 308 KCEACGNTMIV--HAVSGSLHGYYVC 331 KC C +T+I + S Y VC Sbjct: 303 KCGYCNHTLIAKSNTTSNGYEKYMVC 328 >UniRef50_D1NLU0 Resolvase domain protein n=3 Tax=Clostridiales RepID=D1NLU0_CLOTM Length = 537 Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 74/294 (25%), Positives = 134/294 (45%), Gaps = 34/294 (11%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 K+ AY R S+ +S N Q++ E+++ N ++ L I Y D G++ + Sbjct: 3 KRVCAYCRVSTDKDDQINSFNSQKQFFEEYIRKNEEWELVDI-YADEGITG-----TSTE 56 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 +EFL IE +L + + R +R + ++I + + + G+ VI + D Sbjct: 57 KRTEFLRMIEDVKYKKIDLILTKEISRFARNTL-DSIYYTRKLKSMGVGVIFINDG---- 111 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 I++L+E L + ++A A EES S RVK W +KRQ +E G + L + Sbjct: 112 INTLDEDAEL-RLTIMASIAQEESRRISQRVK--WGQKRQ--MEKGVVFGREL---LGYN 163 Query: 182 DKRTAFVPDPDRVKTIELIF-KLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 + + + + +IF K E + + IA+ L + +K G + W ++I K+ Sbjct: 164 LRNGVLTINEQEAEIVRMIFHKFTNEGKGTHVIARELYEAGIKTKRGNLN-WSNTMILKV 222 Query: 241 LANKALIG-IC-----VPSY----RARGKGISE---IAGYYPRVISDDLFYAVQ 281 L N+ +G +C P + + KG E I ++ +IS +L+ A Q Sbjct: 223 LRNEKYVGDLCQKKTITPDFLSHKKKYNKGQEEMIYIKNHHEPIISRELWEATQ 276 >UniRef50_A7AYT5 Putative uncharacterized protein n=4 Tax=Bacteria RepID=A7AYT5_RUMGN Length = 544 Score = 61.2 bits (147), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 70/248 (28%), Positives = 111/248 (44%), Gaps = 23/248 (9%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 K AY R S+ +SL Q R +K N +Y + Y D +S FK K Sbjct: 60 KVCAYCRVSTDADEQENSLENQVRYYETVIKANPNYEYAGV-YSDFAISGFKEKRP---G 115 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREK--VGEAIERLKLILNHGIDVITLCDNTVY 120 + L E G I +L +S+ R +R V EA +LK LN G+ + Sbjct: 116 LQKMLADAEKGKI---DLILTKSVSRFARNTSIVLEATRKLKE-LNVGVFF------ELQ 165 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 NI++L+ L+ IL A A ESE S+ K+ +++K E+G + + Sbjct: 166 NINTLSGEGELMLTILAAF-AQAESESGSTGAKMVYQRK----YEAGIPVQYLERSFGYT 220 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 D+R FV D + + I+++ + + AI +YLN++ VK G E W S + +L Sbjct: 221 KDERGIFVADEEEAVWVRKIYEMAADGYTPAAIKRYLNENGVKTVGGAE--WIDSTVFRL 278 Query: 241 LANKALIG 248 + N+ G Sbjct: 279 IENEIYKG 286 >UniRef50_A8MGG9 Recombinase n=21 Tax=Firmicutes RepID=A8MGG9_ALKOO Length = 518 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 67/272 (24%), Positives = 117/272 (43%), Gaps = 44/272 (16%) Query: 80 TLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNID-SLNEPYSLIKAILIA 138 +LV +DRL R + E L+ +IT +YN+D +E YS +A + Sbjct: 77 AVLVMDVDRLGRGNMQEQGLILETFKKSCTKIIT--PRKIYNLDDEFDEEYSEFEAFM-- 132 Query: 139 QRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD---DKRTAFVPDPDRVK 195 A +E ++ + R++ R ++E G ++ + P +D D RT P P++ + Sbjct: 133 --ARKELKMINRRLQ----NGRVRSIEDGNYISPNPPYGYEIDEGKDYRT-LKPHPEQAE 185 Query: 196 TIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLANKALIGICVPSYR 255 +++IF+ + IA LND K+++G W S + +L N G V R Sbjct: 186 VVKMIFEWYVSGLGSGKIANKLNDLGYKSYTG--IPWRSSSVLNMLKNLVYTGKVVWG-R 242 Query: 256 ARGKGISEIA-----------------GYYPRVISDDLFYAVQEI----RLAPFGISNSS 294 K +E+ G +P ++S++LF QEI P+ + N Sbjct: 243 KDIKKSTEVGKVKDTVTRPKEEWIIADGKHPALVSEELFEKAQEILNKRYHVPYQLENGI 302 Query: 295 KNPMLINLLRTVMKCEACGNTMIVHAVSGSLH 326 NP L +++CE CG +M++ H Sbjct: 303 TNP-----LAGLIRCENCGASMVLRPYPDKDH 329 >UniRef50_C5UY92 Resolvase n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UY92_CLOBO Length = 559 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 124/537 (23%), Positives = 215/537 (40%), Gaps = 102/537 (18%) Query: 18 GDSLNRQRRLIAEWLKVN-SDYYLDTITYEDLGLSAFKGKHAQSGAFSEFLDAIEHGYIL 76 G+S+ Q +L E+ ++ + L+ I YED G F GK+ + F L+ ++ I Sbjct: 16 GESIENQIKLCKEYCDIHYKNENLEYIIYEDEG---FSGKNIKRPQFQNLLNDVKSKQI- 71 Query: 77 PGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDSLNEPYSLIKAIL 136 L+ LDR+SR V + L+L+ + +D I++ N ++ + P + Sbjct: 72 --NILICYRLDRISRN-VADFSSILELLEKYNVDFISI--NERFDTST---PTGRAMVYI 123 Query: 137 IAQRANEESEIKSSRVKLSWKKKRQDALESGTIM----TASCPRWLSLDDKRTAF---VP 189 + A E E + RVK + + + SG + T+ +++ + K F VP Sbjct: 124 SSVFAQLERETIAERVKDNMIQLAKMGKWSGGQLPLGYTSEKVHYMNEEMKEKTFIKLVP 183 Query: 190 DPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLANKALIGI 249 + + TI+ I+ + + S+ + K LN H K +G + + + ++++L + + Sbjct: 184 VDNELDTIQFIYNNFLTKGSILNVTKELNSHGYKTKTGID--FEITGVKRILRSALYVKS 241 Query: 250 C--VPSY----------RARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGIS------ 291 V Y A G G GY R D++ AV + Sbjct: 242 SEFVHEYLKSKKYNVFGEANGNGY---LGYNKRTDKDNIIIAVSNHKAVISSTDWLSVQK 298 Query: 292 -----------NSSKNPMLIN--LLRTVMKCEACGNTMIVHAVSGSLHG----YYVCPMR 334 S++N N L ++KC CG+ M++ + G YY C + Sbjct: 299 KLDANIKRSKETSNRNGTGCNDTLFSGLLKCGKCGSNMVIKYNGKNKDGISYIYYTCSNK 358 Query: 335 R----LHRCDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLELK----IIELQM 386 +RCD P+++ DLVD I+N + I E K +E LE I +L+ Sbjct: 359 EKKYLTNRCDIPNLRSDLVDPIIVNNIKIYNKDILIKEYKNKLSELLENSDKQIINDLKS 418 Query: 387 KIN-------NLIVALSVA----------PEVTAIAEKIRLLDKELRRASVSLKTLKSKG 429 +IN NL+ LS ++ I ++I L + + + LK Sbjct: 419 QINDKEKQARNLVTELSKTESEDVKVLYRAQIDEIIKEINKLKSIISSSEETQLQLKDTI 478 Query: 430 VN------SFSDF-----YAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFM 475 +N SF DF AID+ K RTL EK+ + D K ++ F Sbjct: 479 MNIKHLIQSFIDFNNYFDNAIDINIK------RTLLRNIVEKVTYDADKKDFNVNFF 529 >UniRef50_C2F160 Recombinase n=2 Tax=Lactobacillus reuteri RepID=C2F160_LACRE Length = 517 Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 91/414 (21%), Positives = 168/414 (40%), Gaps = 51/414 (12%) Query: 6 AYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFSE 65 AY R S+ DSL Q+ +++ ++ L I Y D G+S K ++ Sbjct: 22 AYCRVSTNSDEQEDSLANQQDHFKSYIQQQPNWLLHKIYY-DNGISGTKAQN--RPGLQA 78 Query: 66 FLDAIEHGYILPGTTLLVESLDRLSREKVG--EAIERLKLILNHGIDVITLCDNTVYNID 123 L ++G + +L +S+ R SR I +LK +D+ + + N D Sbjct: 79 LLKDCQNGQV---DLVLTKSISRFSRNTTDCLRIIRQLK-----QLDIPVIFEKENINTD 130 Query: 124 SLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDK 183 S++ LI ++L A +ES+ + V+L ++++ S + S P + D Sbjct: 131 SMDS--ELILSVL-GSLAQDESQSIAHNVRLGYQQR-----ASNGVFHYSLPPYGYQKDA 182 Query: 184 RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLAN 243 + DP K + IF +E +S IA+ LN+ A+ + + W S I +L N Sbjct: 183 NRDLIIDPIERKVVLRIFNWTIEGKSPGQIAQTLNEQAIS--TKRNGKWHDSTIRGILQN 240 Query: 244 KALIGICV-------------PSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGI 290 +G P+ +GK I I ++P +I F VQ+I + Sbjct: 241 TVYLGTTEFQKTFTDDEYHRHPNQGEQGKII--IEEHHPAIIDQATFTQVQKIIMLKRKF 298 Query: 291 SNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRD--- 347 +K + + C C + SG + ++ C SI+ D Sbjct: 299 YPQAKAKPQRHTFSRKIYCGNCQKLFKRQSRSGKVCWGCQTHIKSAKDCPVKSIREDALH 358 Query: 348 LVDYNIINELLFN--------CSKIQPVENKKDANE--TLELKIIELQMKINNL 391 L ++N+L+F+ ++Q +N++ A + +E ++ E + K +NL Sbjct: 359 LAFCTMVNKLIFSQKFLLEPLVEQLQADQNQEQAAKLSQVETELKEAKDKQDNL 412 >UniRef50_D2XR37 Site-specific recombinase n=1 Tax=Bacillus phage 11143 RepID=D2XR37_9VIRU Length = 444 Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 79/305 (25%), Positives = 131/305 (42%), Gaps = 45/305 (14%) Query: 81 LLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDSLNEPYSLIKAI--LIA 138 +LV LDRL R + +A + +IT D VY+ D +E + L+ I LI+ Sbjct: 16 VLVIDLDRLGRGDMLDAGMIDRAFRYSSTKIITPTD--VYDPD--DESWELVFGIKSLIS 71 Query: 139 QRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDKRTAFVPDPDRVKTIE 198 ++ E+KS +L + R D+++ G + P + L D+ PDP++ ++ Sbjct: 72 RQ-----ELKSITKRL--QNGRIDSVKEGKHIGKKPP-YGYLKDENLRLYPDPEKAWIVK 123 Query: 199 LIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLANKALIGICV------- 251 IF+L + + IA L+ + K AW S I ++ N+ G+ V Sbjct: 124 KIFELMCDGKGRQMIAAELDRLGIDPPVTKRGAWDSSTITSIIKNEVYTGVIVWGKFKHK 183 Query: 252 --PSYRARGKGISEIAGYYPR----VISDDLFYAVQEI---RLAPFGISNSSKNPMLINL 302 R K E Y +IS +LF A E R P I++ L N Sbjct: 184 KRNGKYTRHKNPQEKWIMYENAHEPIISKELFDAANEAHSSRHKPAVITSKK----LTNP 239 Query: 303 LRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSI--KRDLVDYNIINE-LLF 359 L ++KC+ CG TM++ H Y RC+ P+ K+ +N++ E LL+ Sbjct: 240 LAGILKCKLCGYTMLIQTRKDRPHNYL--------RCNNPACKGKQKQSVFNLVEEKLLY 291 Query: 360 NCSKI 364 + +I Sbjct: 292 SLQQI 296 >UniRef50_C0ZHM9 Putative DNA recombinase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZHM9_BREBN Length = 482 Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 91/381 (23%), Positives = 158/381 (41%), Gaps = 57/381 (14%) Query: 1 MKKAIAYMRFSSPGQM-SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 M+ AI Y+R S+ Q G S+ QR + + V+S + Y D G+SA K + Sbjct: 1 MRTAI-YIRVSTEDQAREGFSIPAQREKLLSY--VHSQGWEVQAVYADEGVSA---KDTK 54 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 A S+ L I G I +LV LDRL+R V + + L+ H + Sbjct: 55 RPALSQLLQDIRTGEI---DVVLVYRLDRLTR-SVLDLYQLLQEFDRHAV---------- 100 Query: 120 YNIDSLNEPYSLIKAI------LIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTAS 173 + S E Y AI L+A A E E + RVKL + ++ G Sbjct: 101 -HFKSCTEVYDTTTAIGRLFITLVAALAQWERENLAERVKLGMSQMARERKRPGG----- 154 Query: 174 CPRWLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWG 233 P + + V + + +F+ S IA++ N ++ +G ++W Sbjct: 155 -PAPFGYNLVQGTLVVNQREASGVRSMFERYDRGESPRQIAEWANHSGLRGKNG--ASWS 211 Query: 234 PSVIEKLLANKALIGICVPSYRARGKGISEIAGY------YPRVISDDLFYAVQEIRLAP 287 S + +LL N G +Y + ++ + +P +I F VQ+ R++ Sbjct: 212 ASAVLRLLKNPVYHGALRWNYTDADQQRNDPEEWIIEEATHPAIIDQACFSRVQK-RMSA 270 Query: 288 FGISNSSKNPMLIN---LLRTVMKCEACGNTM--IVHAVSGS-----LHGYYVCPMRRLH 337 G S+ P +++ L ++ C CG++M ++G H YY+C + Sbjct: 271 RGTSH----PRVLSSRYLFSGLLYCSRCGSSMRGKTTTITGKGEKRYTHRYYLCKNKLAG 326 Query: 338 RCDRPSIKRDLVDYNIINELL 358 CD P+I+ D ++ ++ EL+ Sbjct: 327 TCDAPAIREDRLEKAMVQELM 347 >UniRef50_UPI0001694CB1 DNA recombinase, putative n=2 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001694CB1 Length = 520 Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 90/376 (23%), Positives = 154/376 (40%), Gaps = 69/376 (18%) Query: 1 MKKAIA-YMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYE--DLGLSAFKGKH 57 MK IA Y+R S+ + DS Q+ E K D I YE D G S Sbjct: 1 MKNKIAIYVRVSTTKESQKDSPEHQKWACIEHCKQIDLDTADLIIYEDRDTGTSIVARPQ 60 Query: 58 AQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNH-GIDVITLCD 116 Q E + + G T+L SL R SR+ + ++I ++ +N GI VI++ D Sbjct: 61 IQ-----EMISDAQKGLF---NTILFSSLSRFSRDAL-DSISLKRIFVNALGIRVISIED 111 Query: 117 NTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSR-VKLSWKKKRQDALESGTIMTASCP 175 I+ + ++ ++ Q+ +E+ + S R +K S K G + P Sbjct: 112 FYDSQIEDNEMLFGIVS--VVNQKLSEQISVASKRGIKQSAAK--------GNFIGNIAP 161 Query: 176 ---RWLSLDDKRTAFVPDPDRVKTIELIFKLRMERR-SLNAIAKYLNDHAVKNFSGKESA 231 + ++++ ++T V D ++ K + IF L + ++ I K+LN++A+ S K Sbjct: 162 YGYQKVNIEGRKTLIV-DIEKAKVVREIFDLYVNKKMGEKEITKHLNENAIP--SAKGGT 218 Query: 232 WGPSVIEKLLANKALIGICVPSYRARGKGISEIAGYY----------------------- 268 WG + ++++L N+ G Y GK EI Y Sbjct: 219 WGITSVQRILQNEIYTG-----YNVYGK--YEIKKVYTNLKNIGDRKRKLVKKDQELWQK 271 Query: 269 ------PRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVS 322 P +IS +L+ QEIR +N+ ++ C+ CG+ M+ + Sbjct: 272 SEKRTHPEIISQELYKKAQEIRQIRG-GGKRGGRRKYVNVFAKIIYCKHCGSAMVTASCK 330 Query: 323 GS-LHGYYVCPMRRLH 337 S + Y +C RR H Sbjct: 331 KSDKYRYLICSKRRRH 346 >UniRef50_Q72WY0 DNA recombinase, putative n=7 Tax=Bacillus cereus group RepID=Q72WY0_BACC1 Length = 522 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 87/374 (23%), Positives = 151/374 (40%), Gaps = 38/374 (10%) Query: 2 KKAIAYMRFSSPGQMS-GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 +K Y+R S+ Q + G SL Q + + Y +T YE + G + Sbjct: 6 RKVAIYIRVSTEEQANEGFSLGAQEDYLKQ--------YANTKGYEVYDIYIDDGYSGKD 57 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 E + Y T +LV+S+DR+SR +V + + + +L + + DN Sbjct: 58 YNRPEIQRLFKDLYQEKFTGILVKSVDRISR-RVSDVTKLIDDVLAPRKCYVLVSDN--- 113 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 N+DS + L+A A E + RVK K+ + +G + L Sbjct: 114 NLDSSTTGGTAF-IQLLATFAEYERSMIVQRVKAGMSKRAELGYWNGGHV-------LGY 165 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 D K + + + + IF LR E + +IA LN K G+ + G I+ + Sbjct: 166 DVKNKELKVNKEEAEVVRKIFHLRTEGKGYKSIALILNQQGFKTKRGRLFSIG--TIKTI 223 Query: 241 LANKALIGICVPSYR-----ARGKGISE----IAGYYPRVISDDLFYAVQEIRLAPFGIS 291 L N IG C R KG ++ + G + ++S+DL+ VQ + A Sbjct: 224 LENPLYIGYCRWGRHKNWNVERRKGKTDEYKFVKGKHEPIVSEDLWKRVQGVNYAHKKSI 283 Query: 292 NSSKNPMLINLLRTVMKCEACGNTMIVHAV----SGSLHGYYVCPMRRLHRCDRPSIKRD 347 + ++N +L +++C +CG M++ H YY+C H + + K + Sbjct: 284 SKNRNFNGEFVLSGILRCPSCGAGMVMCKTKKRDKSGYHLYYMCQA--FHSKGKLACKSN 341 Query: 348 LVDYNIINELLFNC 361 L+ I E + C Sbjct: 342 LIRKEDIEEKVLQC 355 >UniRef50_A5Z6W6 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5Z6W6_9FIRM Length = 542 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 82/370 (22%), Positives = 147/370 (39%), Gaps = 50/370 (13%) Query: 3 KAIAYMR--FSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 KAI Y+R ++ + DS+ QRRLI +++ + + + +D + G Sbjct: 5 KAIKYIRLSYTDDKTVESDSVANQRRLIDDYIARHPEIEVVAEKIDD----GYSGVLFDR 60 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 AF E + IE G ++V+ L RL RE + ++ +G+ I + DN Sbjct: 61 PAFQEMMRMIEQG---EANCVIVKDLSRLGREYIETGRYMRRVFPAYGVRFIAINDNVDT 117 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 D+ ++ +K I+ + S +R L K++ D + + TI ++ + Sbjct: 118 ENDAADDLTVSVKNIMNEAYCRDIS--VKTRSALEVKRRSGDFVGAFTIYG-----YVKV 170 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLN------------DHAVKNFSG- 227 DK + D + IF+ R+E S + IA LN +H + + G Sbjct: 171 GDKHKSLEVDEYAANVVRDIFRKRLEGFSASHIADELNRLGILSPLAYKRNHGMPHAKGG 230 Query: 228 ----KESAWGPSVIEKLLANKALIGICV------PSYRAR---GKGISE---IAGYYPRV 271 K+ W + I ++L ++ G V P ++ + K SE + G + + Sbjct: 231 YTDRKDCKWSATTIIRILQDETYTGTLVQGKQTTPHFKLKEREDKPSSEWIRVEGTHEAI 290 Query: 272 ISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMI--VHAVSGSLHGYY 329 I F VQ +R S S + L ++ C CG M + + YY Sbjct: 291 IQKHDFDLVQRLRRIDTRTSPKSDK---VYLFSGILICGCCGCRMTRKTNRYKDKEYHYY 347 Query: 330 VCPMRRLHRC 339 CP + + C Sbjct: 348 YCPTGKKNGC 357 >UniRef50_B7JP85 Site-specific recombinase n=9 Tax=Bacillaceae RepID=B7JP85_BACC0 Length = 516 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 79/305 (25%), Positives = 130/305 (42%), Gaps = 45/305 (14%) Query: 81 LLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDSLNEPYSLIKAI--LIA 138 +LV LDRL R + +A + +IT D VY+ D E + L+ I LI+ Sbjct: 88 VLVIDLDRLGRGDMLDAGMIDRAFRYSSTKIITPTD--VYDPDE--ESWELVFGIKSLIS 143 Query: 139 QRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDKRTAFVPDPDRVKTIE 198 ++ E+KS +L + R D+++ G + P + L D+ PDP++ ++ Sbjct: 144 RQ-----ELKSITKRL--QNGRIDSVKEGKHIGKKPP-YGYLKDENLRLYPDPEKAWIVK 195 Query: 199 LIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLANKALIGICV------- 251 IF+L + + IA L+ + K AW S I ++ N+ G+ V Sbjct: 196 KIFELMCDGKGRQMIAAELDRLGIDPPVTKRGAWDSSTITSIIKNEVYTGVIVWGKFKHK 255 Query: 252 --PSYRARGKGISEIAGYYPR----VISDDLFYAVQEI---RLAPFGISNSSKNPMLINL 302 R K E Y +IS +LF A E R P I++ L N Sbjct: 256 KRNGKYTRHKNPQEKWIMYENAHEPIISKELFDAANEAHSSRHKPAVITSKE----LTNP 311 Query: 303 LRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSI--KRDLVDYNIINE-LLF 359 L ++KC+ CG TM++ H Y RC+ P+ K+ +N++ E LL+ Sbjct: 312 LAGILKCKLCGYTMLIQTRKDRPHNYL--------RCNNPACKGKQKQSVFNLVEEKLLY 363 Query: 360 NCSKI 364 + +I Sbjct: 364 SLQQI 368 >UniRef50_C8W0X4 Resolvase domain protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W0X4_DESAS Length = 603 Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 89/356 (25%), Positives = 147/356 (41%), Gaps = 67/356 (18%) Query: 45 YEDLGLSAFKGKHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLI 104 Y D G+SA K + + + L G T++V DR++R + + + I Sbjct: 59 YSDEGISADKTEIHERYELARMLVNARKGLF---NTIVVFKQDRIARNNL-----QCEFI 110 Query: 105 LNHGIDVITLCDNTVYNIDSLNE--PYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQD 162 N +D+I++ N LN+ P L+A A E E++++R ++ KK Q Sbjct: 111 CNQ-LDLISVPIWEADNSKKLNQASPQDKFFRQLLASFA--ELEVENTRTRIKATKKGQK 167 Query: 163 ALESGTIMTASCP---RWLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLND 219 A +G P RW D+K+ V D R+ +++I+K +E + I+ LN Sbjct: 168 A--AGQFSGGDLPYGFRW-DKDNKKIIEVDDEIRI-WLQIIYKYLVENKGSVVISNELNK 223 Query: 220 HAVKNFSGKE-------SAWGPSVIEKLLANKALIGICVPSYRAR---GKGISEIAGYYP 269 ++ +G + S W + + LL N L G + R G ++ P Sbjct: 224 AGIQFRTGHKTRNGSEFSKWDKNNVLSLLRNPILTGHLPNNVLNRYVDADGKRRVSKVKP 283 Query: 270 R------------VISDDLFYAV-------QEIRLAPFGISNSSKNPMLINLLRTVMKCE 310 R +I DL+Y + ++ P +S S LL ++KC Sbjct: 284 RNIVLQKTPLLREIIPLDLWYRIIDKMESKTNQKIPPRSMSTSW-------LLSGLLKCS 336 Query: 311 ACGNTMIVHAV------SGSLHGYYVCPMRRLHRCDRP--SIKRDLVDYNIINELL 358 CG TMI SG + YY CP + C P SI+++ V+ +INEL Sbjct: 337 CCGATMIAKDTGKKSKSSGETYKYYKCPN---NSCTSPCRSIRKNEVELAVINELF 389 >UniRef50_A5ZPV0 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZPV0_9FIRM Length = 580 Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 87/385 (22%), Positives = 157/385 (40%), Gaps = 56/385 (14%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 + K Y+R S+ Q+ DS+ Q++ + + ++ L T YE + + GK+ Sbjct: 17 ITKVAIYIRVSTIHQVDKDSIPMQKKDLIAYCQL----ILGTDNYEIFEDAGYSGKNTDR 72 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSRE--KVGEAIERLKLILNHGIDVITLCDNT 118 AF + + I G T +LV +DR+SR E E L+ + V + N Sbjct: 73 PAFQDMMGRIRKGEF---THVLVWKIDRISRNLLDFAEMYEELQ-----SLRVTFVSKNE 124 Query: 119 VYNIDS-LNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRW 177 ++ + + E +++K +L+ A E + S RV + + + +G P Sbjct: 125 QFDTSTAIGE--AMLKIVLVF--AELERNMTSERVTATMISRANNGQWNG----GRIPFG 176 Query: 178 LSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVI 237 S D + F D + L ++ +SL A+ LN K +G + W P+ + Sbjct: 177 YSYDSGTSTFSIREDEAVVCRRLKDLYLDNKSLVYTARALNADGYKTRAGAD--WTPTAV 234 Query: 238 EKLLANKALIGICVPSYR-ARGKGISE-----------IAGYYPRVISDDLFYAVQE--- 282 + ++ GI YR R KG I ++P + + + A++ Sbjct: 235 WIIASSPFYAGI----YRYNRYKGTENRTLNPEEEWVMIPEHHPAIFTLEEHEAMKSSLK 290 Query: 283 --IRLA--PFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGY----YVCPM- 333 R P G +++ N I++ + + C CGN M+ GY Y CP+ Sbjct: 291 TNARYVDNPVGKPHATAN---IHIFQGIAYCGKCGNKMVSTPGKKHADGYRPSNYSCPLH 347 Query: 334 RRLHRCDRPSIKRDLVDYNIINELL 358 RR +CD ++ +V IN +L Sbjct: 348 RRSKKCDNATVNDMIVGEFAINYIL 372 >UniRef50_Q73I88 Prophage LambdaW1, site-specific recombinase, resolvase family n=17 Tax=root RepID=Q73I88_WOLPM Length = 500 Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 74/316 (23%), Positives = 128/316 (40%), Gaps = 34/316 (10%) Query: 19 DSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFSEFLDAIEHGYILPG 78 +SL+ QR +++K + Y+D G S G + A E + ++ G + Sbjct: 24 NSLDAQRVACKKYIKSREGWVALAKRYDDGGYS---GSNLNRPAIKELFEDVKAGEV--- 77 Query: 79 TTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDSLNEPYSLIKAILIA 138 ++V +LDRLSRE + IE H I + V I N P +++ Sbjct: 78 DCVVVYTLDRLSRE-TKDCIEVTSFFRRHRISFVA-----VTQIFDNNTPMGKFVQTVLS 131 Query: 139 QRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDKRTAFVPDPDRVKTIE 198 A E E+ RVK K + E G M + P L D K + + K I+ Sbjct: 132 GAAQLEREMIVERVK----NKIATSKEEGLWMGGNVP--LGYDVKEKELIINEKEAKVIK 185 Query: 199 LIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLANKALIGICVPSYRARG 258 IF+ ME RS+ +A+ LN + K + + + +++ N +G + Y + Sbjct: 186 HIFERYMELRSMAELARELNREGYRT-KAKSDIFKKATVRRIITNPIYMGK-IRHYEKQY 243 Query: 259 KGISEIAGYYPRVISDDLFYAVQE-IRLAPFGISNSSKNPMLINLLRTVMKCEAC--GNT 315 KG E +I ++ + QE I+ P+ + LL+ +++C C T Sbjct: 244 KGKHEA------IIEEEKWQKAQELIKNQPYRGKKYEE-----ALLKGMIRCRCCKVNMT 292 Query: 316 MIVHAVSGSLHGYYVC 331 + + YY+C Sbjct: 293 LTYSKKENKRYRYYIC 308 >UniRef50_Q3Z6A0 Resolvase domain protein n=6 Tax=Dehalococcoides RepID=Q3Z6A0_DEHE1 Length = 554 Score = 58.5 bits (140), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 86/348 (24%), Positives = 142/348 (40%), Gaps = 41/348 (11%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 MK A+ Y R SS Q S+ Q R + ++ N +Y ITYE + A G+ A Sbjct: 15 MKVAL-YARVSSEAQDVELSIAAQLRALRDYAGKN-NY---QITYEFID-EAESGRTAAR 68 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITL---CDN 117 F + A+ I P +LV L+R +R + +L L+ GI VI++ D+ Sbjct: 69 PEFKRMI-AMSKSSIPPFEAILVWKLNRFARNRADSITYKL-LLQKKGIKVISINEPLDD 126 Query: 118 TVYN------IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMT 171 + I+SL+E YS I +R +E+ ++ + Q L + Sbjct: 127 SPTGKLMEGIIESLDEFYSANLGQDI-KRGMKENALRG------FYNGSQPPLGYELVKV 179 Query: 172 ASCPRWLSLDDKRTAFVPDPDR---VKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGK 228 P+ +R P+ D VKT+ IF L + + IA LN +GK Sbjct: 180 KDGPK------QRNKLAPEADTSPGVKTVRYIFALADKGKGCKEIANILNREEYITKAGK 233 Query: 229 ESAWGPSVIEKLLANKALIGICVPSYR-----ARGKGISEIAGYYPRVISDDLFYAVQEI 283 WG + + K+L N+A G V R A+ + + +P +I + F +Q+ Sbjct: 234 --PWGRTTVHKILCNEAYTGTLVWGARPSQGLAKNEEAVRLENAWPGIIDKETFQRIQQ- 290 Query: 284 RLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVC 331 + N+ + L + M +CG + H+ + YY C Sbjct: 291 SMVSRQPKNTHPRTVPSQYLLSGMAFCSCGAALTGHSAKSGQYAYYQC 338 >UniRef50_A5FPJ2 Resolvase, N-terminal domain n=8 Tax=root RepID=A5FPJ2_DEHSB Length = 555 Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 93/369 (25%), Positives = 154/369 (41%), Gaps = 51/369 (13%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 K+A+AY+R SS Q+ G SL+ Q RL E K + Y + G SA + Sbjct: 5 KRAVAYVRVSSVSQVEGYSLDAQERLFTELCKNRG--WQSVRIYREEGKSAHVDSIHKRP 62 Query: 62 AFSEFL-DAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 F + L DA + + ++V +LDR SR + +E LK++ HGI ++++ +N Y Sbjct: 63 VFRKLLEDAAKDEF----DVVVVHTLDRWSR-NLTVTLESLKILGKHGIGLVSIVENLDY 117 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTA--SCPRWL 178 ++P ++ ++ A SE S+ V+ ++ + +G+I SC Sbjct: 118 -----SKPDGILFTQMLGAFAQYFSEALSTHVRKGLDQRAYEGKHNGSIPFGYESCWETN 172 Query: 179 SLDDKRTAFVPD--------PDRVKTIELIF-KLRMERRSLNAIAKYLNDHAVKNFSGK- 228 +K+ P+ P + E +F + +L+ +A +LN+ + + K Sbjct: 173 EKGEKKQRCEPEHQSGTHIHPKEGQAAEGLFRRYSSGTTTLSQLAVWLNEQGFRTRNTKN 232 Query: 229 ------ESAWGP-----SVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLF 277 GP S + +L N G RGK + G + +IS +LF Sbjct: 233 LPDANGNLVSGPRLFTSSSVRSILHNPFYTG----QINHRGK---LMPGAHEALISQELF 285 Query: 278 YAVQEIRLAPFGISNSSKN-PMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRL 336 VQ G S + K P LL+ +++C CG M S YY R Sbjct: 286 DLVQLTLRKNSGRSETLKTLPDREYLLKGLVRCSHCGMPMWAQTYK-SGKSYY-----RE 339 Query: 337 HRCDRPSIK 345 H+ R SIK Sbjct: 340 HKASR-SIK 347 >UniRef50_A7VWP7 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VWP7_9CLOT Length = 509 Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 93/379 (24%), Positives = 160/379 (42%), Gaps = 49/379 (12%) Query: 5 IAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFS 64 + Y R+S Q +S+ Q ++ + S Y Y D LS +S Sbjct: 4 VIYARYSDSKQRE-ESIEAQLKVCHAY--AESKGYTVIREYIDRALSG------RSDDRP 54 Query: 65 EFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDS 124 +F I+H +LV LDR SR++ AI + +L N G+ V + +N N Sbjct: 55 QFQLMIKHSERKQFQKVLVYKLDRFSRDEYDPAIYKAQLRKN-GVKVESATENIPDNSFG 113 Query: 125 LNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESG--TIMTASCPRWLSLDD 182 + LI+A++ A+ E++ +VK + + + L +G T + R ++ Sbjct: 114 I-----LIEALISGNNASYSVELRE-KVKRNLELNAEKCLSNGGTTPLGYKLVRLNPNEE 167 Query: 183 K-RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 K + +V + + T++ +F S+ I LN +K S + +A+ S + +L Sbjct: 168 KSKKKYVINEETAPTVQEVFTKYANGWSIKEICDSLNARGLK--SAQRAAFNKSSLHTML 225 Query: 242 ANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLIN 301 N+ +GI + GI EI G P++I +DLF V E + + KNP Sbjct: 226 CNRKYLGIYIYD------GI-EIPGGMPQIIDEDLFNKVAE------KMKLNKKNPGRAR 272 Query: 302 -----LLRTVMKCEACGNTMIVHAVS-----GSLHGYYVCPMR-RLHRCDRPSIKRDLVD 350 +L T + C C M+ H+ + G + YY C R C + + +D ++ Sbjct: 273 AKAEYILTTKLFCGYCKEKMVGHSSNQISKKGIIFNYYKCKNSGRNKPCKKKMVHKDYIE 332 Query: 351 YNIINELLFNCSKIQPVEN 369 II E C K+ EN Sbjct: 333 DIIIME----CRKLLTPEN 347 >UniRef50_Q3DFF9 Site-specific recombinase, resolvase family, putative n=5 Tax=Bacteria RepID=Q3DFF9_STRAG Length = 448 Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 82/339 (24%), Positives = 147/339 (43%), Gaps = 49/339 (14%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 + AY R S+ S Q +++ + DY L I Y D G+SA K + A Sbjct: 14 RVAAYCRVSTDQDEQLSSYENQVSYYRDYILKHEDYELVDI-YADEGISATNTKKRE--A 70 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F+ + G + +LV+S+ R +R + + I+ ++ + GI V +N I Sbjct: 71 FNRLIQDCRAGKV---DRILVKSISRFARNTL-DCIKYVRELKELGIGVTFEKEN----I 122 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD- 181 DSL+ ++ IL + A +ES S +KK E G + + +++ D Sbjct: 123 DSLDSKGEVLLTIL-SSLAQDESRSISENATWGIRKK----FERGEVR-VNTTKFMGYDK 176 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 D+ V +P++ + ++ I++ ++ S +IAK LN + +K +SGK + W PS I K+L Sbjct: 177 DENGKLVINPEQAEVVKHIYQQFLKGYSPESIAKELNTNGIKGWSGK-ANWYPSSILKML 235 Query: 242 ANKALIG--ICVPSY------RARGKGISEIAGYY-----PRVISDDLFYAVQE------ 282 N+ G + +Y + R + ++ YY +I +++ VQE Sbjct: 236 QNEKYKGDALLQKTYTVDFLTKKRTENDGQVNQYYVTNNHEAIIDTEMWDTVQEELAXRK 295 Query: 283 -----IRLAPFGISNSSKNPMLINLLRTVMKCEACGNTM 316 +L + I S NP + C CG+ Sbjct: 296 DFREKHKLKTY-IMQSDDNPFTTKVF-----CAECGSAF 328 >UniRef50_C3NXE9 Putative uncharacterized protein n=5 Tax=Vibrio cholerae RepID=C3NXE9_VIBCJ Length = 556 Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 117/456 (25%), Positives = 189/456 (41%), Gaps = 70/456 (15%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWL-KVNSDYYLDTITYEDLGL---SAFKGK 56 M K + R SS Q + L Q R E + ++ S++ L + DLG SA KGK Sbjct: 5 MPKLYIFRRVSSKRQTNKTGLKIQVR--PETVERLLSEHGLSEVV--DLGAEVASASKGK 60 Query: 57 HAQSGA-FSEFLDAIEHGYILPGTTLLVESLDRLSR-EKVGEAIERLKL-ILNHGIDVIT 113 H + G+ FL E G I G+ L V SLDRLSR EK+G A + L I N+G+ + Sbjct: 61 HIEEGSILKRFLMKCERGEIEQGSILAVYSLDRLSRLEKLGLAKSLIYLPITNNGVSIFG 120 Query: 114 LCDNTVYNIDSLNEPYSLIKAI---LIAQRANEESEIKSSRVKLSWKKKRQDALESGTIM 170 DN +Y +P+ ++ I L+ +RA EES K +R S G Sbjct: 121 EIDNFLY------KPHDVLSEILSSLVFERAAEESRAKKNRNIDSLAANLAQYQRDGQYT 174 Query: 171 T--ASCPRWLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGK 228 T P W++ KT +L + + R +N KN S Sbjct: 175 TKLGKSPSWINH--------------KTGKLNEEAVLWREVINCYT----SGQYKNLSAL 216 Query: 229 ESAWGPSVIEKLL------ANKALIGICVPSYRARGKGISEIAGYYPRVISDD-----LF 277 +A ++ L A+K LIG V KG+ E+A +Y +++ + L Sbjct: 217 HTAMQLAIPYNTLSKVINNAHKTLIGTKVI------KGV-ELAEFYEPLLTQEEYNRLLI 269 Query: 278 YAVQEIRLAPFGISNS-SKNPMLINLLRTVMKCEA-CGNTMIVHAVSGSLHGYYVCPMRR 335 Y Q I+ + ++N L+ L +C + CG+ +V + Y C Sbjct: 270 YVRQMGTGRGKAIATTKTENIWLLKGLGECPECGSLCGSFKNGASVKDKVRYNYRCNAAI 329 Query: 336 LHRCDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVAL 395 CD P+ + ++ + L + + V ++++ N L KI +Q+++ L L Sbjct: 330 NKHCDSPTYNLNPIEAIVT---LLSADYLHEV-SQRETNTELNAKIEAMQVEVERLETQL 385 Query: 396 SVAPEV------TAIAEKIRLLDKELRRASVSLKTL 425 A + +A+ I ++L A L+TL Sbjct: 386 DQATQALNTFFSPELAQAIPKYREQLETAQNELQTL 421 >UniRef50_B0MRU4 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MRU4_9FIRM Length = 398 Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 93/365 (25%), Positives = 158/365 (43%), Gaps = 50/365 (13%) Query: 5 IAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFS 64 + Y RFS+ Q S+ Q ++ E+ S++Y Y D +S A+ F Sbjct: 4 VIYARFSNHSQTE-QSIEGQLKVCYEY--AESNHYTVVGEYIDRAISGTTDNRAE---FQ 57 Query: 65 EFL-DAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNID 123 + D+ +H + +LV LDR +R + AI + KL N G+ V++ +N + Sbjct: 58 RMISDSDKHTF----EGVLVYQLDRFARNRYDSAINKAKLKKN-GVRVLSAKENIANDAS 112 Query: 124 SLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD-D 182 + L++ +L ES + V+LS K R A+ + ++ L D Sbjct: 113 GI-----LVEGVL-------ESMAEYYSVELSQKIHRGMAINAEKCLSNGSNPGLGFKVD 160 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 F D + + I++ + I + L VK GKE + + + LL+ Sbjct: 161 AERRFYVDEEEAAVVREIYERYASGETKAEIIRDLKRRRVKTSLGKE--FSLNSLSHLLS 218 Query: 243 NKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKN-PMLIN 301 NK IG+ Y +GK E G PR++ DDLFY VQ + N +KN P + Sbjct: 219 NKRYIGV----YLYKGK---ETPGGMPRILDDDLFYRVQ-------SMMNKNKNAPARTH 264 Query: 302 -----LLRTVMKCEACGNTMIVH---AVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNI 353 LL T + C C M+ + + +G + YY+C R +CD+ I + ++ + Sbjct: 265 GEGEYLLTTKLFCGHCKEMMVGYGGTSKTGRQYHYYMCKKARKKKCDKKIIGKQYIEDRV 324 Query: 354 INELL 358 ++E L Sbjct: 325 VSECL 329 >UniRef50_C5RQ70 Resolvase domain protein n=4 Tax=Firmicutes RepID=C5RQ70_CLOCL Length = 529 Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 96/396 (24%), Positives = 163/396 (41%), Gaps = 56/396 (14%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 MKK AY R S+ S Q A ++K N+++ + Y D G+SA K + Sbjct: 27 MKKVAAYARVSTDNDEQLSSFEAQMDYYARYIKSNTEWSFVEV-YTDEGISATSTK--KR 83 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 F+ + +G I ++ +S+ R +R V + + ++ + G++V +N +Y Sbjct: 84 DGFNRMITDALNGKI---DLIITKSVSRFARNTV-DTLTTVRQLKEKGVEVYFEKEN-IY 138 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCP--RWL 178 +DS E I + L A EES S V +K+ D S P ++L Sbjct: 139 TLDSKGELLITIMSSL----AQEESRSISENVTWGQRKRFADG-------KVSLPYKQFL 187 Query: 179 SLDDKRTAFVPDPDRVKTI-ELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVI 237 + ++ TI I+KL +E ++ +AIAK+L + GKE W S + Sbjct: 188 GYEKGEDGLPKIVEKEATIIRTIYKLFLEGKTPSAIAKHLTLSKIPTPGGKE-IWQASTV 246 Query: 238 EKLLANKALIGICVPS------YRARGKGIS--EIAGYY-----PRVISDDLFYAVQ-EI 283 +L N+ G + + + K I+ EI YY P +I+ ++F VQ EI Sbjct: 247 SSILKNEKYKGDAILQKSFTIDFLTKKKKINEGEIPQYYVENSHPAIITPEVFDLVQHEI 306 Query: 284 --RLAPFGISNSSKNPMLINLLRTVMKCEACGN---TMIVHAVSGSLHGYYVC--PMRRL 336 R G SS + C CGN + + H+ S + C + Sbjct: 307 KKRKDAKGYKTSS------GCFSGKIVCGKCGNFYGSKVWHSTSKYRRIIWQCNSKFKNN 360 Query: 337 HRCDRPSIKRDLVDYNIINELLFNCSKIQPVENKKD 372 +C P + D + + +FN +ENK++ Sbjct: 361 EKCGTPHLYEDKIKQAFVE--VFNS----VIENKEE 390 >UniRef50_C1FRE4 Resolvase n=3 Tax=Clostridium botulinum RepID=C1FRE4_CLOBJ Length = 540 Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 104/487 (21%), Positives = 189/487 (38%), Gaps = 138/487 (28%) Query: 3 KAIA-YMR---FSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHA 58 KAIA Y R F+ G G ++ +R I ++ N DY + T ++D G S GK Sbjct: 2 KAIAIYARKSLFTGKGDSIGAQVDTCKRFI-DYKFANEDYEIRT--FKDEGWS---GKTT 55 Query: 59 QSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNT 118 F+ ++ I+ I T ++ + R +R+ N Sbjct: 56 DRPDFTNMVNLIKSKKIDYVITYKLDRIGRTARD----------------------LHNF 93 Query: 119 VYNIDSLN-------EPYSLIKAI------LIAQRANEESEIKSSRVKLSWKKKRQDALE 165 +Y +D+L EPY + ++A A E E + RVK Sbjct: 94 LYELDNLGIVYLSATEPYDTTTSAGRFMISILAAMAQMERERLAERVK------------ 141 Query: 166 SGTIMTASCPRWLS------LDDKRTAFV-------------PDPDRVKTIELIFKLRME 206 SG I A RWL D KR ++ P+ + +K ++LI+ +E Sbjct: 142 SGMIQIAKKGRWLGGQCPLGFDSKREIYIDDMGKERQMMRLTPNKEEIKIVKLIYDKYLE 201 Query: 207 RRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLANKALIGICVPSYR----------- 255 S++ + KY +++++ +G + + + +++LL + + ++ Sbjct: 202 MGSMSQVRKYCLENSIRGKNGGD--FSTNTLKQLLTSPIYVKSSDNIFKYLESQNINVFG 259 Query: 256 -ARGKGI------SEI------------AGYYPRVISDDLFYAV-------QEIRLAPFG 289 G G+ EI G + +I D+ + + E ++ G Sbjct: 260 TPNGNGMLTFNKTKEIRIERDKSEWIAAVGKHKGIIDDNKWLQIQQQLQQQSEKQIKSSG 319 Query: 290 ISNSSKNPMLINLLRTVMKCEACGNTMIVHAVS------GSLHGYYVCPMRR---LHRCD 340 ++ LL ++KC CGN +++ G+ + YYVC + H+CD Sbjct: 320 RQGTTS----TGLLSGIIKCSKCGNNLLIKTGHKSKKNPGTTYSYYVCGKKDNSYGHKCD 375 Query: 341 RPSIKRDLVDYNIIN-------ELLFNCSKIQPVENKK---DANETLELKIIELQMKINN 390 +++ D D +I ELL K ++N+K D E LE K+ E + ++N Sbjct: 376 NKNVRTDEADSAVITQLKLYNKELLIKNLKEALIQNEKTDTDNIEILESKLKEKEKAVSN 435 Query: 391 LIVALSV 397 L+ LS+ Sbjct: 436 LVKKLSL 442 >UniRef50_B7JIH4 Resolvase domain protein n=4 Tax=Bacillus cereus group RepID=B7JIH4_BACC0 Length = 515 Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 98/414 (23%), Positives = 167/414 (40%), Gaps = 62/414 (14%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 KA Y+R S+ Q G SL Q ++ E+ D Y D G S GK+ Sbjct: 6 KAGIYIRVSTEEQKQGHSLEAQESMLKEFADRKGYEIYDV--YNDGGYS---GKNFNRPE 60 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDN----- 117 L ++ I +LV +DRLSR + DV++L D Sbjct: 61 IQRLLRDLKDDKI---DVILVWKVDRLSR---------------NNTDVMSLIDTELTPR 102 Query: 118 ------TVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMT 171 T ++DS + P + L++ A E RVK +K+ + +G Sbjct: 103 KKNLIITSIDMDS-SSPTGHMFISLLSTFARYERATIIDRVKAGMQKRAEKGYWNG---- 157 Query: 172 ASCPRWLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESA 231 S + S+D K + + + + + IF+LR E + I LN+ +K +GK + Sbjct: 158 GSILGYDSVDKK---LIINENESEIVREIFQLRAEGKGYKFIVNILNEKGIKTKTGKNFS 214 Query: 232 WGPS---VIEKLLANKALIGICVPSYRARGK-GISE---IAGYYPRVISDDLFYAVQEIR 284 P+ ++ + N ++ + R + G SE + G + +I + L+ VQ++ Sbjct: 215 I-PAIKVIVNNHIYNGKMVWKKHQDWNTRRRTGKSEPIIVEGIHDAIIDEGLWTRVQKVN 273 Query: 285 LAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAV----SGSLHGYYVCPM---RRLH 337 +S++N LL ++KC CG ++ S H YY+C + Sbjct: 274 ELQKNSFSSNRNFNGNFLLTGILKCPKCGAGTVMSKTKKRNSDDYHLYYMCQAYHNKGSS 333 Query: 338 RCDRPSIKRDLVDYNIIN--ELLFNCSKIQPV---ENKKDANETLELKIIELQM 386 C I++D V+ ++N LL N + I E D N+T E I ++M Sbjct: 334 VCSANLIRKDQVEQQVLNIISLLVNENDIINALIDELNSDNNKTNESHIAHIKM 387 >UniRef50_B3CD10 Putative uncharacterized protein n=1 Tax=Bacteroides intestinalis DSM 17393 RepID=B3CD10_9BACE Length = 604 Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 96/386 (24%), Positives = 164/386 (42%), Gaps = 55/386 (14%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 M K I Y R S+ Q L+RQ+ I E+ + N++Y L I ED G+S G A Sbjct: 1 MVKIIGYARVSTTKQ----DLSRQKLKIKEFCE-NNNYELIEII-EDFGIS---GVVADR 51 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSR-EKVGEAIERLKLILNHGIDVITL-CDNT 118 + E ++ +++ L RLSR E V E + ++ I+N G+ VI L + Sbjct: 52 KGYIE----LQSKTYKDADMIVISELSRLSRQEDVTETVYNIQQIINKGLSVILLDSPSK 107 Query: 119 VYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALES------GTIMTA 172 +Y + L + ++ + A A +E +L KKK QD ++ ++ Sbjct: 108 IYEANKLLDITEILILTIKAWAAAQE--------RLDIKKKNQDGKQALFQAYPYAVVDQ 159 Query: 173 SCPRWLSL----DDKRTAFVPD--PDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFS 226 P + KR ++ + P+ V+ I+ +F L ++L A+A+Y N+ + F Sbjct: 160 KIPYGYKAVPNPNGKRPKYILEEVPEEVENIKRLFALVNSGKTLGAVARYFNERNI-TFR 218 Query: 227 GKESAWGPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEI--- 283 G S +++ + + GI + R + I +IS++ F QE+ Sbjct: 219 GYYSTV--AILSNYIHSDIYRGIRRRTQRLGREEPYTIEVRIKPIISEEDFMKAQELIKN 276 Query: 284 --RLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVH----AVSGSLHGYYVCPMRRLH 337 + P G N NP L+ +++C CG M V A S Y + R Sbjct: 277 NYKSTPTGKVNH--NP-----LKGIIRCR-CGRAMTVKDKKPAAGISKLTYRCSCVDRKS 328 Query: 338 RCDRPSIKRDLVDYNIINELLFNCSK 363 D D V Y++ NE+L++ K Sbjct: 329 HPDFCKYNIDEVSYDLTNEILYSLFK 354 >UniRef50_B3E518 Resolvase domain n=1 Tax=Geobacter lovleyi SZ RepID=B3E518_GEOLS Length = 544 Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 83/321 (25%), Positives = 140/321 (43%), Gaps = 36/321 (11%) Query: 2 KKAIAYMRFSSPGQMS-GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 +K Y+R S+ Q G+SL+ Q + + + + + Y + G F GK + Sbjct: 9 RKCALYVRVSTINQAEDGESLDEQVQTLKSYCSYRK--WQNCTVYREEG---FSGKDLKR 63 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVG-EAIERLKLILNHGIDVITLCDNTV 119 AF + + I G I T++V+ +DRLSR + E + K + G+D+I+ T Sbjct: 64 PAFQQMVADIRKGKI---NTVIVKKIDRLSRSIIDFENV--YKSFQDQGVDLIS----TQ 114 Query: 120 YNIDSLNE-PYSLIKAILIAQRANEESEIKSSR-VKLSWKKKRQDALESGTIMTASCPR- 176 N D+ S+I+ +LI A E E S R + + + +Q G PR Sbjct: 115 ENFDTSTAIGRSVIRIVLIF--AQLEREQTSERTIDVMAHRAKQGMFNGGY------PRL 166 Query: 177 WLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSV 236 +D + VP+ D + + +F ++ SL+ AK LN+ + + A Sbjct: 167 GYDIDYENKCLVPNEDEIPIAKEVFTTYLKLGSLSETAKSLNERGYRVKTWTTQAGRTRG 226 Query: 237 IEKLLANKALIGICVPSYRARGKGISEI-AGYYPRVISDDLFYAVQEIRLAPFGISNSSK 295 +K N + P Y + + S I G P +IS++LF AVQ I A +N SK Sbjct: 227 GDKFQKNNVSRMLNDPVYIGKVRYKSGIYDGQQPAIISEELFEAVQTILQA----NNISK 282 Query: 296 NPMLIN----LLRTVMKCEAC 312 N L+ +++C +C Sbjct: 283 TGYRQNENTFYLKGLVRCGSC 303 >UniRef50_B0MRT0 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MRT0_9FIRM Length = 520 Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 80/329 (24%), Positives = 138/329 (41%), Gaps = 39/329 (11%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 +A AY R S+ SL QR ++++ NSD + D G S + Sbjct: 5 RAAAYCRVSTDRAEQSGSLASQRSFFDDYIR-NSDSMTLVGVFYDEGTSGTTTLNRY--G 61 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F++ + G I +L + + R +R V + + +++ G+ +I + D NI Sbjct: 62 FNKMISLAVSGGI---DIILTKEVSRFARNTV-DTLNITRMLRAKGVGIIFIND----NI 113 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 D+ + L +I+ A A EES S RVK W ++R+ +E G + SC L D Sbjct: 114 DTRDSDGELRLSIM-ATIAQEESRKISERVK--WGQQRK--MEQGVVFGRSC---LGYDV 165 Query: 183 KRTAFVPDPDRVKTIELIF-KLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 K + D + ++ IF + + + +IA LN ++ +G W + I K+L Sbjct: 166 KDGKITVNADSAEIVKRIFTEYTVLLKGAESIADGLNAEQIRTVNG--GRWSGAFIRKVL 223 Query: 242 ANKALIG------ICVPSYRARGKGISE-----IAGYYPRVISDDLFYAVQ-EI-RLAPF 288 N +G C P + K ++ I ++ +IS +L+ Q EI R P Sbjct: 224 RNVKYVGDLEQKKTCTPDFLTHKKRLNSSEHIYIRNHHEPIISRELWEQTQAEISRRKPT 283 Query: 289 GISNSSKNPMLINLLRTVMKCEACGNTMI 317 S S + + C CG+ M+ Sbjct: 284 DTSRHSDRYVFSGKV----YCGVCGSVMV 308 >UniRef50_A5FQB3 Resolvase, N-terminal domain n=6 Tax=Dehalococcoides RepID=A5FQB3_DEHSB Length = 504 Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 94/371 (25%), Positives = 151/371 (40%), Gaps = 53/371 (14%) Query: 1 MKKAIAYMRFSSPGQ-MSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 MK AI Y R S+ GQ G SL Q ++ +V Y Y + A+ G + Sbjct: 1 MKAAI-YCRVSTEGQEQDGTSLQTQLEACLKYCQVKG--YEVKYQYSE----AWSGLSLE 53 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVG-----EAIERLKLILNHGIDVITL 114 +E +A+ I ++V SLDR SR+ V + +E+ ++ L + + Sbjct: 54 RPRLAELREAVRSQAI---EVVVVYSLDRFSRDPVHGVILMQELEKNEVALEAATETV-- 108 Query: 115 CDNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASC 174 DN+ + L A L A+R ++ + R L + + GT + Sbjct: 109 -DNS--EVGKLVFYIKGYAAKLDAER-RRDATGRGKRALL-----KNGKMPQGTGVGIYG 159 Query: 175 PRWLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGP 234 +W S KR +P K ++ +F++ +S IAK LND +V +GK+ W Sbjct: 160 YKWDSASKKR---IPLAHESKVVKHMFEMAASGKSCFDIAKTLNDSSVPTKTGKK--WEA 214 Query: 235 SVIEKLLANKALIGICVPSYRARGKGISE----------IAGYYPRVISDDLFYAVQEIR 284 + +LL NKA GI +Y R G + P VIS +LF Q Sbjct: 215 RTVSRLLTNKAYTGI---TYFGRTTGKDHKKTNEDTWHVLTDVTPAVISQELFERAQSA- 270 Query: 285 LAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVC-----PMRRLHRC 339 LA +S K L + C CG+ ++ + + G+ + YY C R C Sbjct: 271 LAKLRELHSGKAKHEYPLTGFAV-CGKCGSPLVGNCLRGN-YRYYHCRGTYPTASRAKIC 328 Query: 340 DRPSIKRDLVD 350 D I+ D ++ Sbjct: 329 DAHYIRADWLE 339 >UniRef50_C0M6W3 Putative phage integrase n=1 Tax=Streptococcus equi subsp. equi 4047 RepID=C0M6W3_STRE4 Length = 477 Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 104/471 (22%), Positives = 191/471 (40%), Gaps = 66/471 (14%) Query: 2 KKAIAYMRFSSPGQMS-GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 +K Y+R S+ Q G S+ Q + ++ + + I YE+ + F G Sbjct: 5 RKVAIYVRVSTTNQAEEGYSIQGQIDSLIKYCEA-----MGWIIYEEYTDAGFSGGKIDR 59 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHG-IDVITLCDNTV 119 A S+ + +H T+LV LDRLSR V + + +K + N I ++L +N Sbjct: 60 PAMSKLITDAKHKRF---DTILVYKLDRLSRS-VRDTLYLVKDVFNQNNIHFVSLQEN-- 113 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 ID+ + +L +L A E +I + R+ + K A T+ P Sbjct: 114 --IDTSSAMGNLFLTLLSAIAEFEREQI-TERMTMG---KIGRAKSGKTMAWTYTPFGYD 167 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEK 239 + ++ + DP + +++I+ ++ S+ I LN +++GK+ W P ++ Sbjct: 168 YNKEKGELILDPAKAPIVKMIYTDYLKGMSIQKIVDKLNKM---DYNGKDCTWFPHGVKH 224 Query: 240 LLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQ-EIRLAPFGI-SNSSKNP 297 LL N G+ + + G + +I+ +LF Q E + GI N P Sbjct: 225 LLDNPVYYGMTRYNNKL-------FPGNHQPIITKELFDKTQRERQRRRLGIEENHYTIP 277 Query: 298 MLIN-LLRTVMKCEACGNTMIVH-----AVSGSLHGYYVCPMRRLHR---CDRPSIKRDL 348 +L ++C CG+ M + G Y C R R CD P + Sbjct: 278 FQAKYMLSKFLRCRQCGSRMGLELGRPRKKEGKRSKKYYCLNSRPKRTASCDTPLYDAET 337 Query: 349 VDYNIINELLFNCSKIQ---PVENKKDANETLELKI----IELQMK-------------I 388 ++ +++E+ +KIQ + +++ E ELK IE + + Sbjct: 338 LEDYVLHEI----AKIQKDPSIASRQKHIEDHELKYKRERIEANINKTVNQLSKLNNLYL 393 Query: 389 NNLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAI 439 N+LI + + + K RLL+ EL + + L + + +DF A+ Sbjct: 394 NDLITLEDLKTQTNTLIAKKRLLENELDKTCDNDDELDRQ--ETIADFLAL 442 >UniRef50_D1N7I8 Resolvase domain protein n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N7I8_9BACT Length = 432 Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 81/338 (23%), Positives = 141/338 (41%), Gaps = 35/338 (10%) Query: 2 KKAIAYMRFSSPGQMSG--DSLNRQRRLIAEWLKVN--SDYYLDTITYEDLGLSAFKGKH 57 K+ I Y R S + +SL+ QR+ +++ + + L Y+D G F G Sbjct: 6 KRCIVYTRKSHEEGLDQAFNSLDAQRQACESYIQSQQFNGWELMPKRYDDGG---FSGGT 62 Query: 58 AQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDN 117 + A E L IE G + +++ +DRLSR V A E HG+ +++ Sbjct: 63 LERPALKELLADIEAGNV---DVVVIYKIDRLSRSLVDFA-ELQSRFEKHGVSFVSVTQQ 118 Query: 118 TVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRW 177 ID+ ++ IL+ A E EI + R++ R+ G + P Sbjct: 119 ----IDTSGSTGRMMLNILMT-FAQYEREIIADRIRDKMAATRK----QGKFAGGTLPYG 169 Query: 178 LSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVI 237 ++K+ V D + ++ IF+ +E +S IA LN + ++ +G+E W S I Sbjct: 170 YKSENKK--MVVRQDEAEVLKRIFQRYLEIQSPKQIAMELNSNGLRIRTGRE--WNTSHI 225 Query: 238 EKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNP 297 + L + A IG + KG G + +I + + VQ + K Sbjct: 226 YRQLNSYACIG------KVEYKG-QIYDGEHEAIIPLETWNEVQRLLKINAATPKGGKTR 278 Query: 298 MLINL-LRTVMKCEACGNTMIVHAV---SGSLHGYYVC 331 +N L+ +++C CG M+ H G + YY+C Sbjct: 279 ESVNAPLKGILRCGHCGCAMMPHYARKSDGRKYYYYIC 316 >UniRef50_C9LP68 DNA integration/recombination protein n=1 Tax=Dialister invisus DSM 15470 RepID=C9LP68_9FIRM Length = 503 Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 95/392 (24%), Positives = 161/392 (41%), Gaps = 71/392 (18%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYED--------LGLSA 52 M +A Y RFSS Q +S+ Q R E+ K ++ Y Y D +G Sbjct: 1 MLRAALYARFSSENQRE-ESILAQFRDSTEYCKKHN--YAIVAKYADEAKSGTTTIGREQ 57 Query: 53 FKG--KHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGID 110 +K K AQ G F ++ +DR +R ++ I + KL G+ Sbjct: 58 YKLMLKDAQKGKFD---------------IVVFHKIDRNARNELDYYITKHKL-EEAGVK 101 Query: 111 VITLCDNTVYNIDSLNEPYSLIKAILIAQRA----NEESEIKSSRVKLSWKKKRQDALES 166 + +IDS + +++++L+ A N +EIK K R++A++ Sbjct: 102 YAY----SRQDIDSTSPEGQMMESMLVGMAAYYSRNLSNEIK--------KGLRENAIQ- 148 Query: 167 GTIMTASCPRWLSLD-DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNF 225 G P S+D DK+ + + D + +IF L I K L + +N Sbjct: 149 GKCTGGRPPYGFSVDADKK--LIINEDEAPAVRMIFDLYAAGVHYGVIRKRLFNAGYRNR 206 Query: 226 SGKESAWGPSVIEKLLANKALIGICVPSYRARGKG------ISEIAGYY----PRVISDD 275 +GKE + + I ++L N+ +G KG S+ Y+ P +S + Sbjct: 207 AGKE--FTIASIYEILRNRKYVGDLYLGKTLFRKGKRNNHQTSDNVQYFENVIPATVSRE 264 Query: 276 LFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSL---HGYYVCP 332 +F VQ ++L + + N I L ++ C CG+ M+ H+ S + YY CP Sbjct: 265 IFEEVQ-VKLDQNKRRSGAGNAKAIYALSGLIHCGQCGSAMVAHSTKNSRGIKNYYYRCP 323 Query: 333 MRRL---HRCDRPSIKRDLVD---YNIINELL 358 RL +C + I RD ++ Y +I +L Sbjct: 324 KGRLLGEEKCPQKFINRDDIESTVYQLIRKLF 355 >UniRef50_A7VSK4 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VSK4_9CLOT Length = 490 Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 88/398 (22%), Positives = 156/398 (39%), Gaps = 60/398 (15%) Query: 1 MKKAIAYMRFSSP-GQMSGDS--LNRQRRLIAEWLKVN----SDYYLDTITYEDLGLSAF 53 M+ A Y+R S G+ G+S ++ QR + ++ + N ++ Y+D + Sbjct: 2 MEPAALYLRLSQEDGERWGESQSISNQRIFLTQYCQANGFTVAECYID---------DGY 52 Query: 54 KGKHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSRE--KVGEAIERLKLILNHGIDV 111 G + F L IE G I T++ + L RL R+ + G +E GI Sbjct: 53 TGTNFNRPGFQRLLRDIERGKI---KTVITKDLSRLGRDYIETGRYVE--CYFPEKGIRY 107 Query: 112 ITLCDNT-VYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIM 170 I + D +S S KA+ A + S + R L+ K++ +G + Sbjct: 108 IAVNDGVDTGKEESAGNDMSAFKAVFNDFYARDVS--RKVRSALTAKRR------AGEFI 159 Query: 171 TASCPRWLSLDDKRTA-FVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKE 229 A P D K+ VPDP+ + I++ ++ S+ IA+ L + + K Sbjct: 160 GAWAPYGYQKDPKQPGKLVPDPESAGVVRRIYRDFLKGESVRGIAEGLTEDKIPTPMEKR 219 Query: 230 SA-------WGPSVIEKLLANKALIGICVP------SYRAR------GKGISEIAGYYPR 270 S W S I ++L + G SY+ + K ++ + Sbjct: 220 SGGLKAQRRWNESTIRRILTCETYAGNLTQNQSKTISYKVKKRIPVPKKEWIVVSNTHEP 279 Query: 271 VISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYV 330 +I+ + F Q++ F +S + P +LL ++ C CG+ M V Y V Sbjct: 280 LITKEEFQMAQQL----FKTRSSPREPKDRHLLSGLVFCGDCGSPMTF--VKDGPRTYLV 333 Query: 331 CPMRRLH--RCDRPSIKRDLVDYNIINELLFNCSKIQP 366 C R + C ++ D V+ +++ L IQP Sbjct: 334 CSSSRRYPGSCKTHCVREDEVERTLLDSLRKLSEGIQP 371 >UniRef50_C5ENX2 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ENX2_9FIRM Length = 581 Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 71/315 (22%), Positives = 130/315 (41%), Gaps = 49/315 (15%) Query: 45 YEDLGLSAFKGKHAQSGAFSEFLD-AIE-HGYILPGTTLLVESLDRLSREKVGEAIERLK 102 YED G++ + + F + LD I+ H Y L ++ R +R V +A+ ++ Sbjct: 47 YEDAGVTGTSVRKRK--GFQQMLDDGIKYHKYDL----IVTRETKRFARNTV-DALSYVR 99 Query: 103 LILNHGIDVITLCDNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQD 162 L+ HGI+V + D I ++++ ++ ++A A EES S V+ + RQ Sbjct: 100 LLKQHGIEVYFVNDG----IWTISDNDGELRLSIMATIAQEESRKTSENVRAGQRISRQK 155 Query: 163 ALESGTIMTASCPRWLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAV 222 + GT R R + D D+ ++ I+K + + I + L +H Sbjct: 156 GVLRGTGNILGYRR-----VGRNQYELDTDQAIIVKKIYKWYLSGDGIRTIKRKLEEHGY 210 Query: 223 KNFSGKESAWGPSVIEKLLANKALIGICVPSYRARGKGISEIA----------------- 265 + +GK S W VI+ +L N P Y R + + +I+ Sbjct: 211 RTATGK-SHWQFQVIDDILKN--------PFYTGRQRQMEKISDGYLTQNRVKNSPDQIE 261 Query: 266 ---GYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVS 322 G Y +IS++ F V+ IR + NS ++ C CG + A S Sbjct: 262 YIRGDYEPIISEEAFKEVERIREQRYDKMNSKGKKDSKSVWCGKYLC-GCGCGTVRRAAS 320 Query: 323 GSLHGYYVCPMRRLH 337 G+ + ++C + ++ Sbjct: 321 GNEY-IFICHSQHMN 334 >UniRef50_UPI0001BCECED site-specific recombinase n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCECED Length = 384 Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 79/290 (27%), Positives = 125/290 (43%), Gaps = 50/290 (17%) Query: 155 SWKKKRQDALESGTIMTASCPRWLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIA 214 +W K++Q A E T + S +L D F + ++ K ++LI+KL + RS AI Sbjct: 17 TWGKRKQFA-EGKTSVGYSA--FLGYDKD---FKINEEQAKVVKLIYKLFLGGRSFYAIT 70 Query: 215 KYLNDHAVKNFSGKESAWGPSVIEKLLANKALIG--ICVPSYRA------RGKGISEIAG 266 K L +K+ SGK+ W S + +L N+ G + Y A R K EI Sbjct: 71 KELEKQGIKSPSGKDK-WYISTVRSILTNEKYRGDALIQKEYTADFLDKTRRKNTGEIPQ 129 Query: 267 YY-----PRVISDDLFYAVQ-EIRLAPFGISNSSKNPMLINLLRTVMKCEACG---NTMI 317 YY +I DLF VQ EI+ +S +++ +KC CG + Sbjct: 130 YYVEEHHEAIIPPDLFDFVQSEIKRREQNGKHSG-----VSIFANKIKCGCCGGWYGAKV 184 Query: 318 VHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINELL--FNCSKIQPVENKKDANE 375 H+ G Y C + H+ +P R L + I + NC VE K++ Sbjct: 185 WHSTDKYRRGIYRCNKKYAHK-GKPCGTRHLTEEEIKQAFVKALNC----LVEVKENV-- 237 Query: 376 TLELKIIELQMKINNLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTL 425 I EL+ +LI ++ E+T +K+ ++ELR + L+TL Sbjct: 238 -----IAELR----SLIDSVCQMEELTEERDKV---ERELRVLAERLETL 275 >UniRef50_B1HUC4 Cassette chromosome recombinase B n=2 Tax=Firmicutes RepID=B1HUC4_LYSSC Length = 643 Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 83/350 (23%), Positives = 144/350 (41%), Gaps = 44/350 (12%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYL---DTITYEDLGLSAFKGKH 57 +KKA Y+R S+ Q+ DSL QR+ + + K Y L + + +ED G SA K+ Sbjct: 7 LKKAALYVRVSTLHQIDKDSLPFQRQELENYAK----YALNIEEVVIFEDAGYSA---KN 59 Query: 58 AQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSR--EKVGEAIERLKLILNHGIDVITLC 115 + E + I G T LLV +DR+SR + E E LK V + Sbjct: 60 TDRPKYQEMMKRIRSGEF---THLLVWKIDRISRNLKDFSEMYEELK-----DCKVTFVS 111 Query: 116 DNTVYNIDS-LNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASC 174 N ++ + + E +++K IL+ A E ++ + RV + + L +G A+ Sbjct: 112 KNEQFDTSTAMGE--AMLKIILVF--AELERKLTAERVFSIMLSRAEKGLWNG----ATV 163 Query: 175 PRWLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGP 234 P ++ V DPD K I+ I+ RS +A L H K + + W Sbjct: 164 PFGYVWSEEEKFPVIDPDESKIIQYIYNSYESLRSTLKVAYRL--HEEKIATKRNGQWTA 221 Query: 235 SVIEKLLANKALIGICVPSYRARG-----KGISE---IAGYYPRVISDDLFYAVQEIRLA 286 + +L N IG + R G K E + +P +I + F V ++ Sbjct: 222 KTVRDILRNPFYIGTYRYNMRESGGSRRLKNKEEWVVVENNHPGIIEKEQFERVNKLLSD 281 Query: 287 PF-GISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGY----YVC 331 + G+++ + + ++ ++ C C + + + GY Y C Sbjct: 282 NYRGLTDVQRADIHKHIFSKMLYCGKCNSLLTAGLDAARKDGYRPSRYTC 331 >UniRef50_UPI0001C37799 recombinase n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37799 Length = 517 Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 102/463 (22%), Positives = 186/463 (40%), Gaps = 67/463 (14%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 + + Y RFSS Q + +S++ Q R + ++ K ++ TY D SA Q Sbjct: 5 IHRVAQYARFSSDNQRT-ESIDAQLRAMNQFCK--QQHWQVVATYTDEARSATTDNRPQ- 60 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 F + + G +LV LDR SR++ AI + +L N+ + LC + + Sbjct: 61 --FQQMIADSGKGIF---DIVLVHKLDRFSRDRYDSAIYKKRLKKNN----VQLC-SVLE 110 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 ID + P S++ ++ A S V K ++ AL+ T CP Sbjct: 111 RID--DSPESIMMESVLEGMAEYYSRNLGREV---MKGMKETALQCK--HTGGCPPLGYD 163 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 + V + + ++ IF++ E +AIA YLN+H G + + + ++ Sbjct: 164 VGEDRKLVVNQHEAEAVKAIFEMFAEGYGYSAIADYLNEHGYTTKRG--HIFAKNSLYEI 221 Query: 241 LANKALIGICVPSYRARGKGISE--------------IAGYYPRVISDDLFYAVQEIRLA 286 L N+ G+ V + RA K S+ + G P +IS LF VQ I+ A Sbjct: 222 LKNEKYTGVFVFN-RAAAKSDSKRNNHAYKTSDNIIRVPGGCPAIISKHLFEKVQRIKAA 280 Query: 287 PFGISNSSK-NPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSI- 344 N+ + + LL + C CG + + +C +RCD P Sbjct: 281 --NRRNTGRYHSKEFYLLTGKVFCGVCGKRIQGNLRFSGERKNRLCT----YRCDEPKQI 334 Query: 345 ---KRDLVDY------NIINELLFNCSKIQPVENK------------KDANETLELKIIE 383 K + DY +++ + +FN + ++ N + E+++ ++ E Sbjct: 335 CKNKENNKDYLDAYVADLLRQKIFNKAALRRRINAVNKYIESYNAEFDEHYESIKTELDE 394 Query: 384 LQMKINNLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLK 426 + + ++N+ VA+ AI E+ L++ L L+ Sbjct: 395 VTVALSNITVAVEKGVLTDAIIERSEALEQRKSEIQAQLAELR 437 >UniRef50_C8VVS5 Resolvase domain protein n=19 Tax=Firmicutes RepID=C8VVS5_DESAS Length = 552 Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 77/296 (26%), Positives = 131/296 (44%), Gaps = 36/296 (12%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 + AY R S+ + S Q E +K N ++ L I Y D G SA K + Sbjct: 32 RVAAYCRVSTTLEQQETSYEAQVSYYTEKIKSNPNWKLAGI-YADDGKSATNTKKRED-- 88 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F+ ++ G I ++ +S+ R +R V ++++ ++ + I V + + Sbjct: 89 FNAMIEDCMAGKI---DMVITKSVSRFARNTV-DSLQNIRKLKEKNIAVFFEKEG----V 140 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS-LD 181 ++L L+ IL +Q A EES S + W R+ E+G +++ + ++L Sbjct: 141 NTLEGTGELLITILSSQ-AQEESRNLSENTR--WGLVRR--FENG-VVSVNHNKFLGYTK 194 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 DK V P+ + + IF+L +E S IAK L V +GK S W +VI+K+L Sbjct: 195 DKNGELVIVPEEAELVRRIFRLYLEGSSSIQIAKILESEGVLTVTGK-SKWCSTVIDKML 253 Query: 242 ANKALIGICVPS----------YRARGKGISEIAGYY-----PRVISDDLFYAVQE 282 N+ +G + R + KGI + YY +I +L+Y VQE Sbjct: 254 LNEKYMGDVLQQKTYTIDFLTKKRVKNKGI--VPQYYIEDDHEAIIPKELYYQVQE 307 >UniRef50_UPI0001973930 site-specific recombinase n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001973930 Length = 563 Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 93/391 (23%), Positives = 162/391 (41%), Gaps = 63/391 (16%) Query: 3 KAIAYMRFS--------SPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFK 54 KA Y+R S S ++ DS++ QR LI E+LK + + + Y D G F Sbjct: 11 KAAIYLRLSKEDGDFSISGEKLESDSISNQRMLIKEYLKKHPEITV-VKEYCDDG---FT 66 Query: 55 GKHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSRE--KVGEAIERLKLILNHGIDVI 112 G + + F+ ++A+ G + ++V+ L R RE + G+ I+ K+ GI I Sbjct: 67 GANFERPDFNRMMEAVRAGLV---DCIVVKDLSRFGREYIEAGDYIQ--KIFPRLGIRFI 121 Query: 113 TLCDNTVYNIDSLNEPYSLIKAILIAQRANEESEIK--SSRVKLSWKKKRQDALESGTIM 170 + DN DS + + +L + +S + S +V+ + KR++ G+ + Sbjct: 122 AINDN----YDSAQPGAADNELVLPFKNLMNDSYCRDISIKVRSNLDAKRRNGQFVGSRV 177 Query: 171 TASCPRWLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKN------ 224 +L D + V DP ++ IFK ++E S IA LND V + Sbjct: 178 VFG---YLRSPDNKNQLVIDPVAAPVVQDIFKWKIEGLSPAQIADRLNDANVPSPIEYKK 234 Query: 225 ---------FSGKESA-WGPSVIEKLLANKALIGICV------PSYRARG---KGISEIA 265 F K+ A W I ++L N+ G V P+++ + K SE A Sbjct: 235 ANGSKQRTCFQTKKVALWSAVAIYRILKNEIYTGTLVQGKTTSPNHKVKKTIVKPQSEWA 294 Query: 266 ---GYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMI--VHA 320 + +I+ F VQ++ L + S ++ + C CG+ M+ V Sbjct: 295 RTENAHEPIIAHAQFDLVQKLMLDD---TRSPSGATGVHPFSGKIYCADCGSPMVRRVSR 351 Query: 321 VSGSLHGYYVCPMRRLHR--CDRPSIKRDLV 349 + Y++C + + C SIK +V Sbjct: 352 CGEKEYAYFICGGNKSDKTSCSAHSIKESVV 382 >UniRef50_Q65CS9 Site-specific DNA recombinase n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65CS9_BACLD Length = 414 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 70/299 (23%), Positives = 124/299 (41%), Gaps = 43/299 (14%) Query: 81 LLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDSLNEPYSLIKAILIAQR 140 +LV + RLSR + + + L ++G+ I+ +N D+ P + L+A Sbjct: 78 VLVWKISRLSRNML-DTLTLLDKFEDYGVKFISYSEN----FDT-GSPIGRLVVQLMASI 131 Query: 141 ANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDKRTAFVPDPDRVKTIELI 200 A E S VKL K++ + +G ++ D V + + ++ I Sbjct: 132 AEMERNTLSENVKLGMKQRALEGSWNGGVV-------FGYDTIEKELVINKKEAEIVQQI 184 Query: 201 FKLRMERRSLNAIAKYLNDHAVKN-----FSGKESAWGPSVIEKLLANKALIGICVPSY- 254 ++L + L +IA YLN + FS A +++ ++ N + + V ++ Sbjct: 185 YQLYANGKGLKSIANYLNKAGYRTKRNCYFSINGVA---QILDNVIYNGKISWLKVENWD 241 Query: 255 --RARGKGISEI--AGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCE 310 R RGK + I G + +ISD+L+ VQ R + S P LL ++++C Sbjct: 242 TKRRRGKNPNPILVEGQHEAIISDELWSMVQARRKSKSFKQRQSNEPF---LLSSLLRCP 298 Query: 311 ACGNTMIVHAVSGSL-------HGYYVCPMRRLHR-----CDRPSIKRDLVDYNIINEL 357 CG M+ + + YYVC H C SIK +Y +IN++ Sbjct: 299 DCGQGMVPAITTNKRKDGTKKKYRYYVCS--NFHNKGSSACRANSIKAYDAEYEVINKI 355 >UniRef50_A5FSM5 Resolvase, N-terminal domain n=2 Tax=Dehalococcoides RepID=A5FSM5_DEHSB Length = 517 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 74/351 (21%), Positives = 133/351 (37%), Gaps = 54/351 (15%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 KK Y R SS Q S++ Q + I E+ K N + E A G+ Sbjct: 6 KKVAIYARVSSDKQDVDLSISAQLKAIREYAKNNGYEVVREFVDE-----AETGRTTARP 60 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 AF E + H P +LV R +R + + + + + + Sbjct: 61 AFREMISLARHPQ-KPFDVILVWKYSRFARSREDSIVYK------------AMLRKSEVH 107 Query: 122 IDSLNEPYS------LIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCP 175 + S+NEP+ L++AI+ + E S + + +++ G +++ P Sbjct: 108 VISINEPFDDTPTGRLLEAIIESL-----DEFYSDNLGEEVTRGMRESAARGFYLSSKPP 162 Query: 176 ------RWLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKE 229 R+ + + T +P++ + +F ++ + L IAK LN + + GK Sbjct: 163 YGYRKVRFKDGEKEHTKLEIEPNQAGIVSSMFTDALKGKGLTEIAKELNHKGIASPRGK- 221 Query: 230 SAWGPSVIEKLLANKALIGICVPSYRA-RGKGISEIAGYYPRVISDDLFYAVQEIRLAPF 288 WG + + +++N+A G V + RG + P +IS +F Q++ Sbjct: 222 -GWGKTAVRTIMSNEAYAGSFVWGRNSKRGLAPIRVENACPAIISRQVFDNAQKL----- 275 Query: 289 GISNSSKNPMLINLLRTVMK--------CEACGNTMIVHAVSGSLHGYYVC 331 + P L + RT + C CG MI + YYVC Sbjct: 276 ---IRERAPKLTHPKRTCSRFLLSGFTFCSHCGKAMIGQDAKSGKYSYYVC 323 >UniRef50_C5UX89 Site-specific recombinase, resolvase family, putative n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UX89_CLOBO Length = 548 Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 45/172 (26%), Positives = 73/172 (42%), Gaps = 22/172 (12%) Query: 192 DRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLANKALIGICV 251 D V ++LIFKL +E AIA LN +KN G E W P+ I +L N G V Sbjct: 206 DEVNIVKLIFKLSLEGNGGRAIATILNSKGIKNRKGNE--WRPNTINGMLQNPTYCGKVV 263 Query: 252 PS--YRARGKG------------ISEIAGYYPRVISDDLFYAVQE-IRLAPFGISNSSKN 296 + Y +R G I E + ++I ++ F +Q+ I + + Sbjct: 264 RNRWYSSRMYGKDIVKLNDTKEWIVEDSNKVDKIIDEETFTIIQDMIEKNRNKVGRPTGK 323 Query: 297 PMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLH---RCDRPSIK 345 + +KCE CG + + G + +Y C ++ H +CD +I+ Sbjct: 324 YHGRSEFAGKIKCEKCGKYYVRNTDRGRV--FYNCSTKKQHGLKKCDSRNIQ 373 >UniRef50_C5V7P9 Recombinase (Fragment) n=3 Tax=Gallionella ferruginea ES-2 RepID=C5V7P9_9PROT Length = 514 Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 49/194 (25%), Positives = 87/194 (44%), Gaps = 21/194 (10%) Query: 190 DPDRVKTIELIFKLRM---ERRS--LNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLANK 244 DPD + + LI++L + E R + IAKYL A + + W + L+N Sbjct: 152 DPDEAEVVRLIYRLYLNGIEGRGAGVKEIAKYL---ATLGYQSRGKPWSIQKVHWTLSNT 208 Query: 245 ALIG---ICVPSYRARGKGISE--IAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPML 299 +G V +A+ E I P ++ D+F V+ +R + S ++ ++ Sbjct: 209 LYMGDYYFNVMDSKAKKPRPPEEWIKTEIPAIVDADIFERVRVLRESRAPQSGTAIPKVM 268 Query: 300 IN--LLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRL---HRCDRPSIKRDLVDYNII 354 + LL ++KC CGN M + G + YY C RR H C +I + D ++ Sbjct: 269 SSPVLLAGIIKCGVCGNRMTLSTGKGGKYRYYKCTSRRGQGNHACSSKNIPMEKFDEMVL 328 Query: 355 NEL---LFNCSKIQ 365 N++ +F+ ++Q Sbjct: 329 NQVANTIFHPDRLQ 342 >UniRef50_B1IBJ7 Low similarity to site-specific recombinase n=34 Tax=Bacteria RepID=B1IBJ7_STRPI Length = 559 Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 90/383 (23%), Positives = 159/383 (41%), Gaps = 55/383 (14%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG- 61 K Y R S+ Q+ G SL Q+ + + N DY + YED G S GK + Sbjct: 7 KVYLYTRVSTSIQIEGYSLGAQKSRMKAFAIYN-DYEI-VGEYEDAGKS---GKSIEGRI 61 Query: 62 AFSEFLDAIEHGYILPGTT-LLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 F+ ++ I+ G G + +LV L R +R + + L+++ ++G+++I + D Sbjct: 62 QFNRMMEDIKSGK--DGVSFVLVFKLSRFAR-NAADVLSTLQIMQDYGVNLICVEDG--- 115 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 IDS + L+ ++L A E I+ ++ +K R+ G P L Sbjct: 116 -IDSSKDAGKLMISVLSAVAEIERENIRIQTMEGCIQKAREGKWNGGF-----APYGYKL 169 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERR-SLNAIAKYLNDHAVKNF---SGKESAWGPSV 236 +D + F+ + + V I IF + N I+KYL +H ++ +GK + + Sbjct: 170 EDGKL-FINEEEAV-AIRTIFDQYVNTTIGANGISKYLENHGIRKIPRQNGKNPLFDAGL 227 Query: 237 IEKLLANKALIGIC---------VPSYRARGKGISE-----IAGYYPRVISDDLFYAVQ- 281 I K+L N G V R K + + G + ++SD+++ A Q Sbjct: 228 IRKILKNPVYNGKIAFGRRTLEKVHGTRNEYKQVEQDEYLISEGIHEAIVSDEVWQAAQV 287 Query: 282 --EIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHG--------YYVC 331 + + + N K+ +LL ++KC CG M + YY C Sbjct: 288 KLKSQAKKYERVNKGKDTR-THLLSGIVKCPICGVGMFGNKCIKKKKDGTKYKDFYYYGC 346 Query: 332 PMRRL---HRCD-RPSIKRDLVD 350 R++ H C I+ +L+D Sbjct: 347 KHRQMIRGHECTFSKQIREELLD 369 >UniRef50_A6LTU9 Resolvase, N-terminal domain n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LTU9_CLOB8 Length = 573 Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 112/522 (21%), Positives = 212/522 (40%), Gaps = 109/522 (20%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLK-VNSDYYLDTITYEDLGLSAFKGKHAQ 59 MK AI + G+ GDS+ Q ++ ++++ + + ++ YED G F GK+ Sbjct: 1 MKVAIYSRKSKYTGK--GDSIGNQIQMCKDYIENLYKNKKIEYSIYEDEG---FSGKNTN 55 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 F + L+ I+ L+ LDR+SR V + L + +G+D +++ + Sbjct: 56 RPEFQKLLNDIKKEKF---NVLICYRLDRISR-NVADFSSTLDELQVYGVDFVSIREQ-- 109 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALE---SGTIMTASCPR 176 D+ + P + + A E E + RV R + +E +G + S P Sbjct: 110 --FDTTS-PMGRAMIYIASVFAQLERETIAERV-------RDNMIELAKNGQWLGGSPPL 159 Query: 177 WLSL----------DDKRTAF-VPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNF 225 S ++K +F V +PD VK ++L++ + S++ +YL ++ + Sbjct: 160 GYSRKRETCYDENGNEKAISFLVQEPDEVKLVKLLYDTYLRLGSIHQTERYLMNNGICAP 219 Query: 226 SGKESAWGPSVIEKLLANK---------------------------------------AL 246 SGK + S + K+L N A Sbjct: 220 SGK--LFATSTMHKILKNPLYAKSSDEILKYLEDDGINVFGSPDGIHGILEYNKTSVIAR 277 Query: 247 IGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLIN----L 302 G ++ + + I+ ++ I D + Q+ +L +NS+ +P L L Sbjct: 278 DGKKTTPFKDKSEWIAAVSKRCEGFIDPDTWLKTQK-QLK----TNSALSPNLGKTNNAL 332 Query: 303 LRTVMKCEACGNTMIVH-----AVSGSLHGYYVCPMRRL---HRCDRPSIKRDLVDYNII 354 L + +KC+ CG++M + +G YY C ++R H C+ ++ D VD ++ Sbjct: 333 LTSKLKCKCCGSSMGITLGRRLNETGLCKVYYRCNLKRRSSGHLCNSKNLIGDKVDECVL 392 Query: 355 NELLFNCSKIQPVENK--------------KDANETLELKIIELQMKINNLIVALSVAPE 400 + L+ Q ++ K TLE ++ ++N L+ LSVA + Sbjct: 393 DSLVEMAKNKQAFLDRILKSKKENKKLKEDKLKKSTLEKQLANKTKQLNGLLDKLSVADD 452 Query: 401 VTAI-AEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDL 441 + I KIR L E+ + +LK++ N+ S+ Y I+ Sbjct: 453 LLDIFMNKIRSLKTEISQLEENLKSIGENIENNSSELYDIEF 494 >UniRef50_C6QV50 Resolvase domain protein n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QV50_9BACI Length = 274 Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 62/258 (24%), Positives = 117/258 (45%), Gaps = 27/258 (10%) Query: 1 MKKAIAYMRFSSPGQM-SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 M KA+AY+R S+ Q+ +G L+ Q+R I E++K N+ + +ED G+S + Sbjct: 1 MCKAVAYVRVSTEEQVKNGSGLDIQKREIEEYVKANNIKLV--AIFEDKGVSGANDVSKR 58 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSRE-KVGEAIER-LKLILNHGIDVITLCDN 117 G D I++ +LV +DRL+R+ + IE+ LK+ + I++ ++ ++ Sbjct: 59 KG----LKDLIQYCRENEVNKVLVTKMDRLARDVYIQLWIEKELKV---YDIEIESINED 111 Query: 118 TVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSW-KKKRQDALESGTIMTASCPR 176 + D + + A+ +E++ +R+ +R+ A + G + +CP Sbjct: 112 NLNGNDYMTVAMRQMVAVF--------AELEKNRIADRLVSGRREKAEKKGQKASGNCPF 163 Query: 177 WLSL----DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAW 232 K V D ++ K ++ IF ++ SL IA LND + G + W Sbjct: 164 GYKYKYNEQGKNPVVVIDEEKAKIVKEIFSDYLKGLSLKQIADKLNDKGITTQRG--NKW 221 Query: 233 GPSVIEKLLANKALIGIC 250 ++ +L N GI Sbjct: 222 SKQAVQTILKNDFYTGIV 239 >UniRef50_A5TXM5 Possible recombinase n=3 Tax=Fusobacterium RepID=A5TXM5_FUSNP Length = 510 Score = 52.0 bits (123), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 92/376 (24%), Positives = 159/376 (42%), Gaps = 44/376 (11%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 M++A+AY RFSS Q +S++ Q R I E+ N ++ L I Y+D +S K + Sbjct: 1 MRRAVAYCRFSSSNQRE-ESIDAQIRAIKEYCNKN-NFKLIRI-YKDEAISGTSTKDREM 57 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 FL+ I ++V DR +R + A+ K++ ++ + +I++ + V Sbjct: 58 -----FLEMILDCKKNLFDCVIVHKYDRFARNRYDHALYE-KILNDNNVKLISVLEQLV- 110 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 + P S+I ++ S+ S VK K+ A+ +G I P L Sbjct: 111 ----DDSPESIILKSVLTGMNEYYSKNLSREVKKGKKENALKAIHNGGIP----PLGYDL 162 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 D + + + + ++LIF+L ++ +IA LN KN GKE + I Sbjct: 163 DKNKKYIINKKE-AEAVKLIFELALDGVGYVSIADILNKKGYKNKRGKE--FRKISIRDT 219 Query: 241 LANKALIGICVPSYR-ARGKGISE---IAGYYPRVISDDLFYAVQEIRLAPFGISNSSKN 296 L N IG + GK E I + +I D+FY VQ + + K Sbjct: 220 LLNIKYIGTYYYGLKDGHGKLQKEPIIIENSHEPIIDKDIFYKVQA------KMKKNLKG 273 Query: 297 PMLIN----LLRTVMKCEACGNTM-----IVHAVSGSLHGYYVCPMRRLH-RCDRPSIKR 346 P N L C CG V+ +GYY +R +C+ +I++ Sbjct: 274 PRNRNGQFYFLTGYCICGECGGPFSGGYRTVNRNGSISYGYYCQKKKRKETKCNNKAIRK 333 Query: 347 DLVD---YNIINELLF 359 +L++ ++II + +F Sbjct: 334 ELIESFIFDIIKKEVF 349 >UniRef50_A6LN32 Resolvase, N-terminal domain n=1 Tax=Thermosipho melanesiensis BI429 RepID=A6LN32_THEM4 Length = 485 Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 102/451 (22%), Positives = 174/451 (38%), Gaps = 73/451 (16%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 MK+A AY R+SS Q S S+ Q I ++ + Y+ Y D SA K Sbjct: 1 MKRAAAYARYSSDRQ-SDTSIEAQLEKIRKYCEEKG--YVVVKEYIDRAQSAATDKRI-- 55 Query: 61 GAFSE-FLDAIEHGYILPGTTLLVESLDRLSREKVGEAI-----ERLKLILNHGIDVIT- 113 AF + F DA H + ++V LDR +R + E L + L + IT Sbjct: 56 -AFQQMFKDAENHEF----DVVVVYKLDRFARNLYDSVVYTKKLEELNIALESTTEPITQ 110 Query: 114 -LCDNTVYNI-DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMT 171 + NI ++NE Y N + EI+ + ++ K G M Sbjct: 111 DIAGKFFRNIMGAINELYI----------ENLKQEIRDKAIVVAKK---------GYFMG 151 Query: 172 ASCPRWLSLDD-------KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKN 224 P L + KR + D + + IF+L + +L IA LN +K Sbjct: 152 GVPPFGFKLVEETDEYGKKRKRYEIDENEAPYVREIFQLASQGVTLRQIADKLNQKGLKT 211 Query: 225 FSGKESAWGPSVIEKLLANKALIGICV------PSYRARGKGISEIAGYYPRVISDDLFY 278 G + W + +++ N+ GI +Y A + + I G P ++ ++ ++ Sbjct: 212 RRG--NKWTVRALYEMILNEKYAGIYTYQKGTKHNYHANREDVIRIPGVIPAIVDEETYW 269 Query: 279 AVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHR 338 + GI S + LL ++ C CGN M A SG Y +R Sbjct: 270 NARN----KLGIG-SKRVKRHHYLLNGILYCAVCGNPMNGGAQSGDYPRYMCSYAKRFKE 324 Query: 339 CDRPSI-KRDLVDYNI--INELLFNCSKIQPVENK--KDANET----------LELKIIE 383 SI K+ + DY + I F + + + K+ N+T L+ ++ E Sbjct: 325 KGHVSIGKKKIEDYVLTHIKHTFFTNVDFEKLAKQLNKELNKTNKTKEKQIQKLKAELAE 384 Query: 384 LQMKINNLIVALSVAPEVTAIAEKIRLLDKE 414 + +K+ A+ E+ + ++I L ++ Sbjct: 385 INLKLQRATQAILAGVELDTLKDEIEKLKQQ 415 >UniRef50_A9KQ42 Resolvase domain n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KQ42_CLOPH Length = 444 Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 89/384 (23%), Positives = 160/384 (41%), Gaps = 79/384 (20%) Query: 1 MKKAIAYMRFSSPGQ-MSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 M + Y+R S+ Q + G SL QR + ++ K D + T Y D G++A K K+ + Sbjct: 1 MIRVALYIRVSTEEQALHGFSLEAQREALTKYAK-EHDMEI-TGVYIDEGITARK-KYNR 57 Query: 60 SGAFSEFLDAI-EHGYILPGTTLLVESLDRLSRE-----KVGEAIERLKLILNHGIDVIT 113 F ++ + E + L +L LDR R K+ E +E ++ Sbjct: 58 RKEFMRLIEGVKEKSFDL----ILFTKLDRWFRNISDYYKIQETLETYEV---------- 103 Query: 114 LCDNTVYNIDSLNEPYSLIKAI------LIAQRANEESEIKSSRVKLSWKKKRQDALESG 167 N ++ E Y A ++ A +E++ S R++ ++ K +++ Sbjct: 104 -------NWKTIFESYDTSTASGRLHINIMLSVAQDEADRTSERIRSVFENK----IKNK 152 Query: 168 TIMTASCPRWLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLND----HAVK 223 I+T P +++K D D+ + I IFK + RS+NA K++N H Sbjct: 153 EIVTGKQPYAYVINNK--TIEVDEDKAELIRDIFKYYNDVRSVNATMKHMNQKYNLHKSY 210 Query: 224 NFSGKESAWGPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEI 283 +F E L K Y +G+ + YYP++IS DLF +VQ+ Sbjct: 211 DFYR----------ETLRTRK---------YTGDFRGVPD---YYPQIISTDLFDSVQDS 248 Query: 284 RLAPFGISNSSKNPMLINLLRTVMKCEACG---NTMIVHAVSGSLHGYYVCPMRRLHRC- 339 + + M + + +++C+ CG N M + Y HRC Sbjct: 249 KSSYI----RENQTMRLYIFSGLIQCKECGLKMNGMQTVTSANKFMTYRCRNAATYHRCS 304 Query: 340 DRPSIKRDLVDYNIIN--ELLFNC 361 +R SI+ D ++ ++N +LL++ Sbjct: 305 NRLSIREDKIELYLLNNIQLLYDT 328 >UniRef50_D1C6M6 Resolvase domain protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6M6_SPHTD Length = 524 Score = 51.6 bits (122), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 47/184 (25%), Positives = 77/184 (41%), Gaps = 14/184 (7%) Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 D +T V +P+ ++ IF+ E R L AIA+ L D + +GK + W + + K+ Sbjct: 168 DADKTRLVVNPETAPIVQRIFREAAEGRPLRAIARGLTDDGIPTPTGKPT-WSMTTVSKI 226 Query: 241 LANKALIGIC-VPSYRARG-------KGISEIAGYYPRVISDDLFYAVQE-IRLAPFGIS 291 L + G ++++R G+ G P ++ F VQE + Sbjct: 227 LKHPHYTGDARAWTWQSRNGYVRNHEAGLPLPEGTVPPLVDRATFELVQEQFARNQARAA 286 Query: 292 NSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHR--CDRPSIKRDLV 349 +++NP L ++C CG M VH SG Y C R R C P I ++ Sbjct: 287 RNNRNPEAALLRGGYVRCGYCGRAMHVHKNSGK--PAYRCNGREYRRGSCPMPVIAAHVL 344 Query: 350 DYNI 353 D + Sbjct: 345 DAAV 348 >UniRef50_B3Z2D3 Cassette chromosome recombinase B n=2 Tax=Bacillus cereus group RepID=B3Z2D3_BACCE Length = 467 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 85/371 (22%), Positives = 148/371 (39%), Gaps = 56/371 (15%) Query: 3 KAIAYMRFSSPGQMS-GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 K + Y R S+ Q+ G SL+ QR + ++ K S ++ Y D G SA K+ + Sbjct: 2 KCVIYRRVSTDMQVEEGISLDMQRLRLEQYAK--SQGWVVVNDYCDEGYSA---KNTERP 56 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 AF + + ++ +LV LDR +R ++ L IL + D Sbjct: 57 AFQQMIKDMKKKQF---DIILVYRLDRFTR-----SVSDLHSILK-------MMDEYNVK 101 Query: 122 IDSLNEPYSLIKAI------LIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCP 175 S E + A L+A A E E + RV+ S KK + L +G A P Sbjct: 102 FKSSTEIFDTTTATGRMFITLVATLAQWERETTAERVRDSMHKKAELGLRNG----AKAP 157 Query: 176 RWLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPS 235 + D K+ + + ++ IF++ + + + +I K LN VK GK + Sbjct: 158 --MGYDVKKGNLYINHTEAEIVKYIFEM-YKTKGVISIVKSLNSRGVKTKRGK--TFNYD 212 Query: 236 VIEKLLANKALIGICVPSYRARGKGISEIAGY-YPRVISDDLFYAVQEI----RLAPFGI 290 + ++ N IG R +++IA + I D +Y VQ++ ++ + Sbjct: 213 AVRYIINNPIYIG----KIRWGDDILTDIAQKDFETFIDKDTWYTVQQVQDSRKIGKVRL 268 Query: 291 SNSSKNPMLINLLRTVMKCEACGNTMI----VHAVSGSLHGYYVCPMRRLHRCDRPSIKR 346 N + V++C CG + V A + + GY CD P + Sbjct: 269 QN-------FFVFSNVLRCSRCGKHFLGSKQVRAHNRIVMGYRCSSRHHKGTCDMPQVPE 321 Query: 347 DLVDYNIINEL 357 D+++ +N L Sbjct: 322 DVLEKEFLNLL 332 >UniRef50_A7HP92 Resolvase domain n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HP92_PARL1 Length = 537 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 84/350 (24%), Positives = 137/350 (39%), Gaps = 40/350 (11%) Query: 2 KKAIAYMRFSSPGQMSGD-SLNRQRRLIAEWLKVNSDYYLDTI-TYEDLGLSAFKGKHAQ 59 +KAI Y R S+ Q D S+ Q IA + + ++ + TY D G SA Q Sbjct: 3 QKAIVYARVSTTRQADHDLSIPDQ---IAHAERYCKERDIEIVGTYVDPGASARDDNRPQ 59 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 F +D ++ G + +LV S R R+ G A+ +++ HG ++++ T Sbjct: 60 ---FQRMMDDVKSG-AMQVDVVLVHSFSRFFRDACGAAVY-TRILEKHGARLVSMTQETG 114 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 + N ++ + Q A + S ++ + + A T R + Sbjct: 115 EGAQA-NLMRHMLSSFDEYQSAETAKHVTRSMIENAKRGFWNGAAAPYGYKTIVVERHGN 173 Query: 180 LDDKRTAFVPDPDRVKTIELIFKL------RMERRSLNAIAKYLNDHAVKNFSGKESAWG 233 D K+ +P + ++LIF+L + + + YLN V N +GK + Sbjct: 174 KDKKKLDL--EPQEAEIVKLIFQLYLYGDGKTGPLGIKNLVSYLNGRGVNNRNGK--PFR 229 Query: 234 PSVIEKLLANKALIGIC--------VPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRL 285 I++ L A IG R R + I EIA P ++ + +F+AVQ Sbjct: 230 IQHIQEALRRSAYIGTHYFNRTDSRTRKPRPREEWI-EIA--VPPIVEESIFHAVQ---- 282 Query: 286 APFGISNSSKNPMLIN----LLRTVMKCEACGNTMIVHAVSGSLHGYYVC 331 A N + P I LL V CE CG M + YY C Sbjct: 283 AQLDARNPTMTPPRIASSRILLTGVATCENCGAPMRTRTGKNGQYWYYTC 332 >UniRef50_A9NFR7 Serine recombinase n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NFR7_ACHLI Length = 572 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 82/335 (24%), Positives = 136/335 (40%), Gaps = 39/335 (11%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 K+ AY+R S+ S QR + + N D+ D I Y D G+S K+ + Sbjct: 27 KRVCAYVRVSTDNLEQKTSYEAQRDEYTQRITKNPDWIFDGI-YADEGISGTSTKNRKQ- 84 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F+ ++ G I +L +S+ R +R V +A+ ++ + +++I +N Sbjct: 85 -FNLMIEKARAGQI---DIILTKSISRFARNTV-DALNYIRELRQINVEIIFEKEN---- 135 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWL--S 179 I SL+ + I+ + A EE+ S VK W +R+ G + + R+L + Sbjct: 136 ISSLDPKVEFLLTIM-SSMAQEEARNVSENVK--WNVQRR--FREG-VPIINHKRFLGYT 189 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEK 239 D K V P+ + ++LIF L + IAK L + K +GK + W S I Sbjct: 190 KDKKGGNLVVVPEEAQIVKLIFNLYISGVGPAKIAKQLIEMGAKTGAGK-TEWRLSTITT 248 Query: 240 LLANKALIGICVPS--------YRARGKGISEIAGYYPR-----VISDDLFYAVQEIRLA 286 +L N+ +G + R K + YY +I D F Q IR Sbjct: 249 ILKNEKYMGDMLQQKTISIDYLSHTRVKNKNHAPTYYTENSHEAIIDRDTFELAQRIRKD 308 Query: 287 PFGI-----SNSSKNPMLINLLRTVMKCEACGNTM 316 + N SK L ++ C CG T+ Sbjct: 309 RAKVRIGEDKNLSKYSRTYPLTAMII-CSECGRTL 342 >UniRef50_UPI00017F31ED hypothetical protein EscherichcoliO157_20522 n=1 Tax=Escherichia coli O157:H7 str. EC4024 RepID=UPI00017F31ED Length = 55 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 23/24 (95%), Positives = 23/24 (95%) Query: 178 LSLDDKRTAFVPDPDRVKTIELIF 201 LSLDDKRTAFVPDPDRVKTIELI Sbjct: 16 LSLDDKRTAFVPDPDRVKTIELIL 39 >UniRef50_C7HAC5 DNA integration/recombination protein n=4 Tax=Faecalibacterium prausnitzii RepID=C7HAC5_9FIRM Length = 528 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 99/472 (20%), Positives = 202/472 (42%), Gaps = 62/472 (13%) Query: 4 AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAF 63 A+ Y R+S+ Q +S+ Q R + + N + Y D +SA Q F Sbjct: 3 AVIYARYSTDSQRE-ESIEGQIRECTAYAEKNG--FTVVKHYIDRAVSAKTDNRPQ---F 56 Query: 64 SEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNID 123 + + E G ++V LDR +R + A + +L N G+ +++ + + Sbjct: 57 QQMIKDSERGIF---DVIIVWKLDRFARNRYDSARYKTQLKRN-GVKLVSATE-----VI 107 Query: 124 SLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDK 183 S +++++L +++ V+ + + GTI P +D+ Sbjct: 108 SAGPEGIILESVLEGYAEYYSADLSEKVVRGMTENALKGIYNGGTI-----PFGYMIDET 162 Query: 184 RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLAN 243 R + PDP +E F+ + ++ + +L H +KN G E ++ + I+++L+N Sbjct: 163 R-HYQPDPLLAPYVEQTFQKYADGATMTDLRDWLKAHNIKNSMGGEMSY--NTIQRMLSN 219 Query: 244 KALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLL 303 + IG R + + + P ++S++LF VQ+ +LA + + I LL Sbjct: 220 RRYIG------ELRLRDVVQ-PNAIPALVSEELFNKVQK-KLAKNKKAPARHKAEEIYLL 271 Query: 304 RTVMKCEACGNTMIVHAV---SGSLHGYY-VCPMRRLHRCDRPSIKRDLVDYNIINELL- 358 T + C CG M + +G ++ YY ++ CD+ ++++ ++ ++NE + Sbjct: 272 TTKLYCGKCGALMFGESGVSHTGKMYTYYKCAAAKKKKTCDKKAVRKQWLEDLVVNETMK 331 Query: 359 -------FNC--SKIQPVENKKDANETLELKIIELQMK-----INNLIVALSVAPEVTAI 404 N K+ ++N+ E+ +L I E Q+K I N++ A+ + ++ Sbjct: 332 LVEDDASMNAIIVKVMELQNQ----ESTDLPIYEKQLKETEVGITNMLNAIQMGILTSST 387 Query: 405 AEKIRLLD---KELRRASVSLKTLKSKGVNSFSDFY-----AIDLTSKNGRE 448 E++ L+ KEL+ + K K F F+ +D+T R+ Sbjct: 388 KERLEALEDQRKELQARIAEERLAKPKMKEEFVRFWLLRFRKLDMTQPEQRQ 439 >UniRef50_A8SCA0 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SCA0_9FIRM Length = 545 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 82/355 (23%), Positives = 137/355 (38%), Gaps = 65/355 (18%) Query: 2 KKAIA-YMRFSSPGQMSGDSLN--RQRRLIAEWLKVNS----DYYLDTITYEDLGLSAFK 54 KK A Y R S + +SL+ Q+ ++ E+ N YY+D + Sbjct: 9 KKVTALYCRLSKDDGSNSESLSIRTQKAMLMEYATRNGFGNCQYYVD---------DGYS 59 Query: 55 GKHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITL 114 G ++ AF E LD I G + T++ + RL R + HG+ I + Sbjct: 60 GTNSDRPAFQELLDDIREGKV---ATVITKDQSRLGRNHIETGTYMEIFFPEHGVRYIAI 116 Query: 115 CDNTVYNIDSLNE--PYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTA 172 D N S + P+ I + A+ + +IKS+ L +KK SG +++ Sbjct: 117 NDGYDSNEQSQMDIAPFRNIINEMYAK--DTSRKIKSA---LRTRKK------SGKYISS 165 Query: 173 SCPRWLSLDD-KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAV-------KN 224 P D V DP+ +E I+ + E L+ IAK L+D V K Sbjct: 166 GAPFGYQKDPADHNHLVIDPNTAPVVEYIYSMAEEGLGLHRIAKRLHDEKVLKPCYYKKE 225 Query: 225 FSG------KESAWGPSVIEKLLANKALIG---------ICVPSYRARGKGISE---IAG 266 G K W + I ++L + G + + S + R E + Sbjct: 226 MFGRFIDDEKMYDWDSAYISQVLHSPVYAGHIIYEAKPTVSMKSKKRRYIPFEERAIVPN 285 Query: 267 YYPRVISDDLFYAVQEI---RLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIV 318 + +I D + VQ I R + F + + N+ + +++C CG TM+V Sbjct: 286 THEAIIPQDRWENVQRILYSRSSSFMCDKTDYD----NIFKGIVRCADCGRTMLV 336 >UniRef50_C7WYU0 Site-specific recombinase n=2 Tax=Enterococcus faecalis RepID=C7WYU0_ENTFA Length = 537 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 103/439 (23%), Positives = 178/439 (40%), Gaps = 73/439 (16%) Query: 3 KAIAYMRFSSPGQMSGDSLN--RQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 +A Y R SS +S++ QR L+AE+++ +DT Y D G F G + Sbjct: 8 RAAIYCRLSSEDGADHESMSIGNQRALLAEYVQKQGWEIVDT--YIDDG---FSGTNFDR 62 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKV--GEAIERLKLILNHGIDVITLCDNT 118 F + IE G I ++ + L RL R + G+ E + H + I L D Sbjct: 63 PGFQRMIADIEKGRI---NLVITKDLSRLGRNYIMCGQYTE-IYFPERH-VRYIALNDG- 116 Query: 119 VYNIDSLNEPYSL----IKAILIAQRANE-ESEIKSSRVKLSWKKKRQDALESGTIMTAS 173 +D+LN+ S+ K IL A + ++IKS+ L K KR G + A Sbjct: 117 ---VDTLNQTSSMDITPFKHILNDMYAKDISTKIKST---LHTKAKR------GEYLGAL 164 Query: 174 CPR-WLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSG----- 227 P +L D + + + + + +F++ +IA LN + + + Sbjct: 165 DPYGYLRHPDDKHKLIINEETAPVVRRMFEMCAAGIGSKSIATTLNREGILSPTEYTRFR 224 Query: 228 -----------KESAWGPSVIEKLLANKALIGICV------PSYRARG------KGISEI 264 + S W + ++ +L N+ +G V PSYR++ K + Sbjct: 225 KHNPERDGEFERRSFWTRTYVQFMLKNEIYVGSMVQGRQYTPSYRSKKREPIPKKDWIVV 284 Query: 265 AGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGS 324 + ++S +LF Q+ A + P +L + CEACG +M V VS Sbjct: 285 PNMHEPIVSRELFDEAQKRMGARKKTIKAKDEP---DLFAGLFFCEACGTSM-VPKVSQQ 340 Query: 325 LHGYYVCPMRRLH-----RCDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLEL 379 + YY C R H C I RD ++ ++ N +++ + +K A + +EL Sbjct: 341 KYFYYTCG--RSHAIGNLACSAHYINRDTFHQAVLEDIRRN-ARLFSEDTEKAAQKLMEL 397 Query: 380 KIIELQMKINNLIVALSVA 398 K + Q + + L+ A Sbjct: 398 KCADQQKQTAAMKRDLASA 416 >UniRef50_C0E5J2 Putative uncharacterized protein n=1 Tax=Corynebacterium matruchotii ATCC 33806 RepID=C0E5J2_9CORY Length = 670 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 93/380 (24%), Positives = 161/380 (42%), Gaps = 63/380 (16%) Query: 2 KKAIAYMRFSSPGQMS-GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLG---LSAF--KG 55 K+AI+Y+R S+ GQ S GD+ AE + + + LG + F +G Sbjct: 8 KRAISYIRVSTHGQASRGDA--------AEGFSIPAQREANKRKASQLGALIIKEFIDRG 59 Query: 56 KHAQSGAFSEFLDAIEHGYILPGTT---LLVESLDRLSREKVGEA-IERLKLILNHGIDV 111 + A+S E + + GYI ++V LDRL+R +V + I R V Sbjct: 60 ESARSAKRPELQNML--GYIKEHPEVDYVIVHKLDRLARNRVDDVDINR----------V 107 Query: 112 ITLCD----NTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESG 167 C+ +T NID P S++ +++ A S V +K ++ +G Sbjct: 108 FDECNVRLISTSENIDQT--PGSMLLHGIMSAIAEFYSRNLGHEVTKGMSQKAKNGGTNG 165 Query: 168 -TIMTASCPRWLSLDDKRTAFVP-DPDRVKTIELIFKLRMERR-SLNAIAKYLNDHAVKN 224 + R + D K TA+V DP+R I F+L ++ +A +L Sbjct: 166 RATLGYVNKRGKNGDGKDTAWVEIDPERGPHITEAFRLYATGDWTVAKLAAHLE---AAG 222 Query: 225 FSGKESAWGPSVIEKLLANKALIGICV-PSYRA----RGKGISEIAGYYPRVISDDLFYA 279 + + ++ PS + L L+GI P YR +G +E G +P +I + + Sbjct: 223 LTSRATSRHPS---RPLGKNQLLGILRNPYYRGVVVYQG---AEYPGKHPALIDTETWLL 276 Query: 280 VQEIRLAPF-GISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSG---SLHGYYVCPMRR 335 VQ + + + G N + N + L+T ++C CGN + + + + + Y+VC R Sbjct: 277 VQSVLTSHYHGERNRTHN----HHLKTTVRCGLCGNRLTIQNSTNRHDTTYAYFVCRYRS 332 Query: 336 LH--RCDRPSIKRDLVDYNI 353 H +C + D VD + Sbjct: 333 RHQPKCGFHAALIDAVDEQV 352 >UniRef50_B8FB35 Resolvase domain protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FB35_DESAA Length = 226 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 65/250 (26%), Positives = 111/250 (44%), Gaps = 35/250 (14%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 M+K AY+R S GQ+ G+ +RQ I + +S + Y+D G+S G+ + Sbjct: 1 MEKCFAYLRVSGQGQIDGNGFDRQIETIRAF--ADSKGFEVVSVYQDGGISGTTGEDDRP 58 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSRE-KVGEAIERLKLILNHGIDVITLCDNTV 119 S D +++G + +LVESLDRL+RE ++ E + L +++ G +++ NT Sbjct: 59 AFKSMVADILKNGVRI----ILVESLDRLAREYRIQEQL--LIYLVSKGTSLVSA--NTG 110 Query: 120 YNIDSLNEPYSLIKAILIAQRANEE--SEIKSSRVKLSWKKKRQDALESGTIMTASCPRW 177 N+ + KA++ Q E + +++K + +K RQD C Sbjct: 111 ENVTEAIMSDPMRKAMVQIQGVFSELDKSLLVNKLKKAREKVRQD--------KGKCE-- 160 Query: 178 LSLDDKRTAFVPDPDRVKTIELIFKLRMERR------SLNAIAKYLNDHAVKNFSGKESA 231 KR + ++ I I LR +R S AIA LN GK+ Sbjct: 161 ---GAKRYGENSEAEQA-VIRHIRALRRNKRGGKKGLSYQAIADTLNAEGYTTKRGKQ-- 214 Query: 232 WGPSVIEKLL 241 WG + + ++L Sbjct: 215 WGATQVRRVL 224 >UniRef50_C6QTF5 Recombinase n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QTF5_9BACI Length = 517 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 73/282 (25%), Positives = 125/282 (44%), Gaps = 47/282 (16%) Query: 58 AQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNH-----GIDVI 112 A+ + L +E G +LV +DRL R G+ ++ + IL+ G +I Sbjct: 68 AERPQLQKLLRKVETGI---ADAVLVMDIDRLGR---GDMLD--QGILDRAFRYSGTKII 119 Query: 113 TLCDNTVYNIDSLNEPYSLIKAI--LIAQRANEESEIKSSRVKLSWKKKRQDALESGTIM 170 T + VY+ +S E + L+ I LIA+ EE + S R++ + +R A E +I Sbjct: 120 TPTE--VYDPES--ETWELVFGIKSLIAR---EELKAISKRMQ---RGRRASAAEGKSI- 168 Query: 171 TASCPRWLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKES 230 + P + L D+ PDP+ + IF++ + AIA L+ VK K + Sbjct: 169 -SKKPPYGYLRDENLKLYPDPETSWVVVKIFEMMRDGYGRKAIAAELDRLGVKPPDEKRA 227 Query: 231 AWGPSVIEKLLANKALIG-ICVPSYR---ARGKGISE---------IAGYYPRVISDDLF 277 W P+ I ++ N+A +G I +R GK + + + ++S +L+ Sbjct: 228 FWAPTTITSIIKNEAYMGHIVWGKFRYVKQNGKYVRKKMPPDRWYVKENAHEPLVSKELW 287 Query: 278 YAVQEI---RLAPFGISNSSKNPMLINLLRTVMKCEACGNTM 316 A + R P + N S L N L ++KC+ CG T+ Sbjct: 288 EAANKAYKSRWRPSTVENKS----LANPLAGILKCDICGFTI 325 >UniRef50_A3VUU7 Putative uncharacterized protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VUU7_9PROT Length = 528 Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 103/455 (22%), Positives = 179/455 (39%), Gaps = 78/455 (17%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 KA Y R+SS Q S S+ Q L + L+ S + +T+ Y D +S G Sbjct: 4 KAAIYARYSSDLQ-SIRSIEDQIALCRQHLEQKS--WTETVVYSDRAISG--GAMVTRPG 58 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 E + +G ++ E+LDR+SR++ A K++ HG+ ++TL + V Sbjct: 59 IQELIRGAANGQF---NVVVAEALDRISRDQADTAT-IYKILAFHGVSIVTLSEGEV--- 111 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 DS++ + K ++ +E+ + ++ + + SG C + + Sbjct: 112 DSMHVGF---KGVM--------NEMFLRDLAKKTRRGQTGVVNSGRSAGGHCYGYDIVPG 160 Query: 183 KRTAFVP-DPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVI---- 237 ++ + + D +T+ I +L +E S +IA LN V G S W S I Sbjct: 161 EQNGILTINEDEAETVRRIMRLFVEGTSPRSIAAMLNKEGVAAPRG--SDWRASTINGQV 218 Query: 238 ---EKLLANKALIG---------ICVP---SYRARGKGISE-IAGYYP--RVISDDLFYA 279 +L N+ IG + P R R SE + P R++ D+L+ A Sbjct: 219 HAGNGILNNELYIGRRIWNRRHKVTDPFSGKKRMRANPESEWVINEVPDLRIVDDELWQA 278 Query: 280 VQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLH-R 338 V+ + +K P LL +++C CG M + + Y C RR Sbjct: 279 VKLRQQKHSRKRGGAKRP--TRLLSGLLECSVCGGPMSIVS-----QNRYGCSTRREKGT 331 Query: 339 CDRPSIKRDLVDYNIINELLFNCSK--IQPVENKKDANE-----------------TLEL 379 C S R + + +L +K + P K A E LE Sbjct: 332 C---SNNRTIAAKELEERVLAGLNKALLHPDAQKAAAREFHAELVRQQRATGSERFQLEK 388 Query: 380 KIIELQMKINNLIVALSVAPEVTAIAEKIRLLDKE 414 I E +I+ ++ A++ TA+ +K+ L+ E Sbjct: 389 AIAEADRRIDRIVDAIAEGVATTALKQKLVALETE 423 >UniRef50_A5KP69 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5KP69_9FIRM Length = 493 Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 87/346 (25%), Positives = 143/346 (41%), Gaps = 42/346 (12%) Query: 2 KKAIAYMRFSSPGQ--MSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 K Y+R S+ GQ +S DS Q +L+ ++ K N D + I YE LG+S G+ A Sbjct: 4 KYCYGYVRVSTSGQEELSPDS---QAKLLKDFAKKN-DMIILQIFYE-LGIS---GRKAD 55 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 + + A+ P ++V R +R + + + L H +DV+++ + V Sbjct: 56 KRPEFQKMIALAKSDKHPVDCIIVWKFSRFARNQEESIVYKSLLKKKHNVDVLSVSEPLV 115 Query: 120 YNIDSLNEPY-SLIKAILIAQRANEESEIKSSRVKLSWKKKR---QDALESGTIMTASCP 175 + P+ SLI+ I+ E + V+LS + R + A G A P Sbjct: 116 ------DGPFGSLIERII-------EWMDEYYSVRLSGEVTRGMTEKAKRGG--YQARPP 160 Query: 176 RWLSLDDKRTAFVPDPDRVKTIELIF-KLRMERRSLNAIAKYLNDHAVKNFSGKESAWGP 234 + ++ V P+ + I++IF K E + IA+YLN K K + Sbjct: 161 LGYKIQERGKPPVIVPEEAEIIKIIFDKYVNEHTGIFDIARYLNLCGFKTSHNK--PFER 218 Query: 235 SVIEKLLANKALIGIC--------VPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLA 286 IE +L N G+ R + I G P +IS +LF Q + Sbjct: 219 RSIEYILQNPTYCGMIRWNRTVSETNEIRPESEWIVS-DGQQPAIISKELFDKAQIRYKS 277 Query: 287 PFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSL-HGYYVC 331 + S + + + L +MKC CG TMI V+ + Y+ C Sbjct: 278 EYKPSGARPSSTYKHWLSGLMKCPVCGRTMIAKTVNNQKSYCYFTC 323 >UniRef50_Q97JP5 Site-specific DNA recombinase n=1 Tax=Clostridium acetobutylicum RepID=Q97JP5_CLOAB Length = 544 Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 82/349 (23%), Positives = 151/349 (43%), Gaps = 56/349 (16%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 +KK Y+R S SL Q+++I + K N+ Y L I +ED +S G Sbjct: 11 LKKVYGYVRLSRDEDKEQASLENQKQIIRTYAK-NNGYILVKI-FEDDNVS---GMTFDR 65 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 +E + IE+G I LLV+ L R+ R K A+ ++ + + I VI++ +N + Sbjct: 66 EGLNELKEVIENGNI---DILLVKDLSRIGRHKAYSAL-FMEELRSKKIKVISIAEN-LD 120 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 N+D N+ K IL Q A + S +++ ++ +K+++ L P Sbjct: 121 NMDENNDILIGFKQILNEQYAKD----ISRKIRAAFHQKQKEGL------VIVPPFGYEK 170 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLND------------------HAV 222 +++ D + ++ IF L + IA+ L + HA Sbjct: 171 NNQTNKIEIDEECAGVVKKIFSLYIGGFGYKKIAQQLTEEKVHTPSWHQFQKSGKVYHAG 230 Query: 223 KNFSGKESAWGPSVIEKLLANKALIGI--CVPS-----YRARG------KGISEIAGYYP 269 K + G++ W I ++L+N+A IG C + Y+ RG + I E +YP Sbjct: 231 KKWIGQD-IWSDRTIARILSNEAYIGTLKCHTTTRSVIYKTRGLIPKDEQIIHE--NFYP 287 Query: 270 RVISDDLFYAVQEIRL-APFGISNSSKNPMLINLLRTVMKCEACGNTMI 317 +I ++++ + I+ G +S N I+ ++ C+ CG+ + Sbjct: 288 PIIDEEVWEKTKAIKKNRTRGHVRASGNSK-IHKYAGLLICKDCGSGFV 335 >UniRef50_A8RK24 Putative uncharacterized protein n=3 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RK24_9CLOT Length = 452 Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 40/139 (28%), Positives = 62/139 (44%), Gaps = 24/139 (17%) Query: 190 DPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLANKALIGI 249 +P++ + + LIF S+ IA L D V + GK S W P++I K+L NK +G+ Sbjct: 19 NPEQSEAVHLIFDAYDGGESIKKIAGMLKDKKVPSVHGKPS-WTPALIRKILRNKDYLGV 77 Query: 250 CVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMK- 308 YPR+I D+ F VQE + N ++P ++ RT M Sbjct: 78 EP----------------YPRMIEDEQFKRVQEHLKRSRDLWN-QRHPTG-SIQRTSMYT 119 Query: 309 ----CEACGNTMIVHAVSG 323 C +CG ++ SG Sbjct: 120 ARLICSSCGGVYSIYKQSG 138 >UniRef50_A5N4T4 Putative uncharacterized protein n=7 Tax=Bacteria RepID=A5N4T4_CLOK5 Length = 559 Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 81/361 (22%), Positives = 143/361 (39%), Gaps = 56/361 (15%) Query: 7 YMRFSSP----GQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 Y+R S G+ +S+ Q++L+ ++ + + D + TY D G + G Sbjct: 28 YIRLSKEDLNRGKDDSNSVTNQKKLLDDYYRQHLDEFESAETYVDDGCT---GTDTNRAD 84 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSRE--KVGEAIERLKLILNHGIDVITLCD--NT 118 F L I Y ++V+ L RLSR G IE L + +N + I+L + ++ Sbjct: 85 FQRLLADI---YAKKVNCVIVKDLSRLSRNYTDAGSLIENLFVQMN--VRFISLAEGVDS 139 Query: 119 VYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPR-W 177 N DS++ I ++ Q + S K R +KK+ +G + + P + Sbjct: 140 YLNPDSVSSILVPITNVMNDQYCYQTS--KKIRQVFDYKKR------NGEFIGSYAPYGY 191 Query: 178 LSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAV------KNFSG---- 227 + + + A + D + + ++ IF + + ++ AI +LNDH V K G Sbjct: 192 IKDPNDKHALLVDHEAAEVVKQIFSMCLSGMTVRAIVNHLNDHGVMCPSVYKQSQGLKYK 251 Query: 228 -----KESAWGPSVIEKLLANKALIGIC------VPSYRARG-KGISE-----IAGYYPR 270 + W I +L N +G V SY+ + + E + + Sbjct: 252 CPNGQTQPMWSTITISNMLKNPVYVGDMAQGRNRVKSYKIHKIEAVPEKDWIVVPNTHEP 311 Query: 271 VISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYV 330 +I + F V++ L S K L L ++C CG M S L+ YY Sbjct: 312 IIDREAFEKVKQ--LLKRDTRTSPKQKQLY-LFSGFLRCADCGRAM-SRIASKELYVYYQ 367 Query: 331 C 331 C Sbjct: 368 C 368 >UniRef50_C7IHA5 Resolvase domain protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IHA5_9CLOT Length = 515 Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 103/460 (22%), Positives = 197/460 (42%), Gaps = 63/460 (13%) Query: 4 AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAF 63 A Y R+SS Q +S++ Q R I E+ + N Y Y D SA Q Sbjct: 3 AAIYARYSSDNQRE-ESIDAQVRAINEYAQRNG--YSIVKIYSDEARSATTDNRPQ---- 55 Query: 64 SEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNID 123 FL ++ ++V LDR SR++ A + +L N G+ +I++ + N+D Sbjct: 56 --FLQMMKDSATGLFNAVIVHKLDRFSRDRYDSAFYKRQLKKN-GVKLISVLE----NLD 108 Query: 124 SLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDK 183 + P S+I ++ A S + V K ++ AL+ + L DK Sbjct: 109 --DSPESIILESVLEGMAEYYSANLAREV---MKGMKETALQCRHNGGTPPLGYDVLPDK 163 Query: 184 RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLAN 243 ++ + + I IF++ S N I +N ++ SG+ ++G + + +L N Sbjct: 164 --SYAINESEARIIRTIFEMYASGHSYNEIIDTMNREGYRSKSGR--SFGKNSLHDILRN 219 Query: 244 KALIGICVPSY---RARG----------KGISEIAGYYPRVISDDLFYAVQE--IRLAPF 288 + G + + +A G K I + P +IS +L+ V + I Sbjct: 220 EKYTGTYIFNRTVSKAGGKRNNHSSKSDKDIIRVENGMPAIISKELWNEVSKKMIGNKRA 279 Query: 289 GISNSSKNPMLINLLRTVMKCEACGNTMIVH-AVSG---SLHGYYVCPMRRLHR-CDRPS 343 +NS+K L++ L + C CG + + SG +L+ Y C R+ R C S Sbjct: 280 RAANSAKETYLLSGL---VFCGVCGGSFAGNRKFSGRNKNLYVTYECTTRKRKRTCCMKS 336 Query: 344 IKRDLVDYNIINELLFNCSKIQPVENKKD------ANETLEL---------KIIELQMKI 388 I+++ ++ +I++LL + +E D T E+ ++ +Q +I Sbjct: 337 IEKNFIENLVIDQLLSDIFAPDAIERIADRLAEYAKTRTSEISKNIRDYENELAGIQTQI 396 Query: 389 NNLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSK 428 NN + A++ ++ +K+ L E R+++++++ ++K Sbjct: 397 NNTVNAIANGMFHPSMKQKMDEL--EARKSALTIRIEEAK 434 >UniRef50_B5S6I3 Hypothetical site-specific recombinase (Partial sequence c terminus) protein n=1 Tax=Ralstonia solanacearum RepID=B5S6I3_RALSO Length = 348 Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 45/195 (23%), Positives = 79/195 (40%), Gaps = 26/195 (13%) Query: 241 LANKALIGICVPSYRARGKGISE--IAGYYPRVISDDLFYAVQEIRLA---PFGISNSSK 295 + N ALIG+ G+ + + YYP +I LFY VQ +R A G N+ + Sbjct: 1 MTNIALIGVLQMDQDNNGRTTTNTFVEDYYPPIIDKTLFYEVQAMRKARDRNKGTMNAGR 60 Query: 296 NPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIIN 355 N+ + KC CG+ M + G G+ C + L S V YNI N Sbjct: 61 KGQCYNIFQGTAKCGYCGSPMHIRRKPGINTGFLYCS-KSLQGGGCVS-----VSYNIRN 114 Query: 356 ---------------ELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPE 400 +L S V K+ + ++ E + K+ NL+ A+ + Sbjct: 115 LESEFIMFTRELDLHRVLGETSTDNGVTAKRASLAACNARVEEAETKLKNLVAAIETGGD 174 Query: 401 VTAIAEKIRLLDKEL 415 + + +++R ++ ++ Sbjct: 175 MPILVQRLRDVEAQI 189 >UniRef50_UPI0001C355EF site-specific recombinase n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C355EF Length = 545 Score = 48.9 bits (115), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 88/422 (20%), Positives = 164/422 (38%), Gaps = 60/422 (14%) Query: 3 KAIAYMRFSSPG--QMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 +A AY+R S ++ DS+ QR LI +L D L +D + G Sbjct: 11 RADAYLRLSKEDGDKVESDSIANQRDLIRHFLADKPDIQLVDEQIDD----GYSGATFDR 66 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 +F + ++ ++ G I ++V+ L R R V ++ +G+ I + DN Sbjct: 67 PSFQKMMEDVKSGKI---NCIIVKDLSRFGRNFVEAGRYIDQIFPEYGVRFIAINDNFDS 123 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 L+ + + A R +L K+K+ D + S + +L Sbjct: 124 AKGRSQSDNVLLPFLNLVNDAFCRDISIKVRSQLEVKRKKGDFVGSFAVYG-----YLKD 178 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAV-------KNFS------- 226 D R + D + IFK +++ S IA LN+ + KN Sbjct: 179 PDNRHKLIVDEFAANVVRDIFKWKIDGLSQQRIADRLNELGILSPMEYKKNCGMAYRTGF 238 Query: 227 --GKESAWGPSVIEKLLANKALIGICV------PSYRARGKGISE-------IAGYYPRV 271 ++ W + ++L N+ IG V P+++ + K I + I + + Sbjct: 239 QVSTKAKWTAVAVGRILRNEFYIGTLVQGKRTTPNHKVK-KTIEKPNNEWVRIENNHEPI 297 Query: 272 ISDDLFYAV-----QEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAV--SGS 324 ++ + F AV Q+ R+AP + ++L ++ C CG M+ + V +G Sbjct: 298 VTIEEFSAVGRLLLQDTRVAP--------DQNTVSLFSGLIFCGDCGQNMVKNGVCKAGK 349 Query: 325 LHGYYVCPMRRLHR-CDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLELKIIE 383 + YY+C R + C I V +++ L + S + +E + L L+ E Sbjct: 350 TYSYYMCCTNRAKKGCSSHRIPEQAVADSVLMSLKEHISTVLEIEKTLEFLAGLPLQRAE 409 Query: 384 LQ 385 +Q Sbjct: 410 VQ 411 >UniRef50_C7HT51 TnpX site-specific recombinase n=2 Tax=Clostridiales Family XI. Incertae Sedis RepID=C7HT51_9FIRM Length = 572 Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 85/388 (21%), Positives = 156/388 (40%), Gaps = 68/388 (17%) Query: 4 AIAYMRFSSPG--QMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 A+ Y+R S + +S++ QR +I + + N + Y D G S G + Sbjct: 12 AVMYLRLSKEDGEKTESNSISNQREIINSYARKNQIPIVKE--YVDDGYS---GANFDRP 66 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSRE--KVGEAIERLKLILNHGIDVITLCDNTV 119 F E + A Y T++V+ L R R+ + G+ I+R+ +GI I++ DN Sbjct: 67 NFKEMIKA---AYDRKFNTIIVKDLSRFGRDYIEAGKYIQRI--FPENGIRFISVNDN-- 119 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIK--SSRVKLSWKKKRQDALESGTIMTASCPR- 176 DS + + IL + +S + S++VK S K KR E G ++A P Sbjct: 120 --YDSKSADINDTHLILPIKNFINDSYCRDISNKVKSSQKIKR----EKGDFISAFAPYG 173 Query: 177 WLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKN------------ 224 + ++ + V D I+ IF +++ S AIA LN V N Sbjct: 174 YKKSEENKNKLVIDKKISDIIKNIFDMKLLGYSSKAIADELNHLGVLNPRKYKESQGFKC 233 Query: 225 ---FSGKESAWGPSVIEKLLANKALIGICVPSYRARGKGIS-----------------EI 264 + K W + +++ N+ IG + +GK ++ + Sbjct: 234 NGFQNTKGGTWSAKTVNRIIENEVYIGNTL-----QGKSVTLSYKNKKQIEKEKEEWIRV 288 Query: 265 AGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGS 324 + +IS ++F + N+S+ I++ ++ C+ CG+++I V Sbjct: 289 ENTHEAIISKEVFTIANTMLKRDL---NNSRGKDKIDIFTGMLFCKECGSSLIRRTVKYK 345 Query: 325 LHG--YYVCP-MRRLHRCDRPSIKRDLV 349 +Y+C + C R SIK + + Sbjct: 346 KREEIFYICSKYNKGKSCTRHSIKEETL 373 >UniRef50_B8FU52 Resolvase domain protein n=2 Tax=Clostridiales RepID=B8FU52_DESHD Length = 526 Score = 48.1 bits (113), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 83/365 (22%), Positives = 149/365 (40%), Gaps = 63/365 (17%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTIT----------YEDLGLSA 52 + IA +R ++ ++S DS ++Q IA+ DYY I Y D G++ Sbjct: 22 QEIAKLRVAAYARVSSDSDDQQNSYIAQ-----VDYYTKNIATHEGWELADIYADEGITG 76 Query: 53 FKGKHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVI 112 ++ F+ + G I +LV+S+ R +R E I+ ++ +L GI + Sbjct: 77 LVA--SKRDDFNRMIQDCRDGKI---DRVLVKSISRFAR-NTKEYIQYVRELLRLGISIH 130 Query: 113 TLCDNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTA 172 +N ID+ I A + + ES+ S+ +++S + + +E GT ++ Sbjct: 131 FEKEN----IDTGKMTSEQI-ATIYGAFSQMESQNHSNNMRISVRMR----MEKGTYISP 181 Query: 173 SCPRWLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAW 232 S P L+++ A V P++ + + IF + + IA LN + ++ W Sbjct: 182 STPYGYKLEER--ALVIIPEQAEVVRRIFTAYLSGQGKEDIANELNRMGIPRTKDRK-MW 238 Query: 233 GPSVIEKLLANKALIGICV----------PSYRARGKGISEIAGYYPR-----VISDDLF 277 + I +L N + G V P + R KG E Y+ ++S D F Sbjct: 239 YSTTIGYILTNISYTGDMVWQKSFATNDIPFRQVRNKG--EKPKYFVENCHEPIVSQDEF 296 Query: 278 YAVQEI----RLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPM 333 VQ + RL G +S+ LL+ + C CG V+ + Y+ C Sbjct: 297 QRVQALLETRRLQIAGTVSSA-------LLKKKLHCGNCGTLFRRKIVNEKV--YWACRR 347 Query: 334 RRLHR 338 H+ Sbjct: 348 HDSHK 352 >UniRef50_A0LPU3 Recombinase n=6 Tax=Deltaproteobacteria RepID=A0LPU3_SYNFM Length = 528 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 71/328 (21%), Positives = 136/328 (41%), Gaps = 40/328 (12%) Query: 45 YEDLGLSAFKGKHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLI 104 Y+D G F G + + L I+ G I ++V +DRLSR + + ++ + L Sbjct: 62 YDDGG---FSGGNMERPGLRRLLADIDAGKI---DVIVVYKVDRLSRSLL-DFMKMIDLF 114 Query: 105 LNHGIDVITLCDNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRV--KLSWKKKRQD 162 G+ +++ + S +P + ++ A E E+ + R+ K++ K+R Sbjct: 115 NEKGVSFVSVTQHF-----STTDPTGRMFLGILITFAQYEREVIAERIRDKVAAAKRRGK 169 Query: 163 ALESGTIMTASCPRWLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHA- 221 I+ R D+K+ + +PD +T++ IF+ ++ S + + LN+ Sbjct: 170 YCGGVPILGYDVDR----DNKK--LLVNPDEARTVQYIFRRFIQIGSAKKLGQELNEQGY 223 Query: 222 -VKNFSGKE------SAWGPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISD 274 K ++ K+ S W + I +LL N+ IG R+ G + +I Sbjct: 224 RTKAWTTKKGKVRDGSEWNTAHIYRLLNNRIYIGEIAHKDRS-------YPGEHEGIIDR 276 Query: 275 DLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTM--IVHAVSGSLHGYYVC- 331 + VQ I + S ++ L+ V++C CG M +G + YY+C Sbjct: 277 ATWDKVQAILEDNKPVKVSMARTKMVAPLKGVIRCGHCGCAMGPTYARKNGRHYTYYICQ 336 Query: 332 --PMRRLHRCDRPSIKRDLVDYNIINEL 357 R + RC I ++ +I +L Sbjct: 337 KDSKRTVSRCPLKRIPAGDIEQAVIEQL 364 >UniRef50_C7GH36 Site-specific recombinase, resolvase family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GH36_9FIRM Length = 560 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 79/355 (22%), Positives = 138/355 (38%), Gaps = 67/355 (18%) Query: 3 KAIAYMRFSSPGQ--MSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 KA Y R S + + ++ Q L+ ++K + D ++ Y+ ++F G + + Sbjct: 27 KAGLYARLSHEKEENIERGTIETQMELMKNYVKDHEDIVIEEEYYD----ASFTGTNFER 82 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKV--GEAIERLKLILNHGIDVITLCDNT 118 F L+ + G I ++V+ L RL R V G IER+ LN + I + D+ Sbjct: 83 PDFKRMLEDAKTGRI---NCIIVKDLSRLGRNYVEMGNYIERVFPFLN--VRFIAVTDD- 136 Query: 119 VYNIDSLNEPYSL---IKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCP 175 DS L +K I+ A + S+ S+ + W + M P Sbjct: 137 ---FDSFRPGTDLMMPLKNIVNEFYAKDISKKVSTAHRRKWT--------TDEYMCGFAP 185 Query: 176 R-WLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAV-------KNFSG 227 +L ++ V D + LI+KL ++ + IAKYLN+ + K+ Sbjct: 186 YGYLKSKTEKNRIVVDEATAGNVRLIYKLFLDGKGYTPIAKYLNEQGIMSPLMYLKSLGY 245 Query: 228 KES-----AWGPSVIEKLLANKALIGICVPSYRARGKGISE-----------------IA 265 +++ W + ++ +L N+A IG V GK + E + Sbjct: 246 QQNVKTNGVWTKTTVKSILTNQAYIGSAV-----HGKVVIEKYNNIPLHATDPSEWVIVE 300 Query: 266 GYYPRVISDDLFYAVQ----EIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTM 316 + ++ + F Q EI A F + P NLL+ + C CG M Sbjct: 301 NTHEPLVDKETFEKAQERVKEISDAYFAKEFTKHPPNEKNLLKGKIVCGDCGKGM 355 >UniRef50_C0W970 Site-specific recombinase n=1 Tax=Acidaminococcus sp. D21 RepID=C0W970_9FIRM Length = 545 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 75/350 (21%), Positives = 142/350 (40%), Gaps = 41/350 (11%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 KK AY R S + SL+ Q ++ ++ N ++ + Y D G+S K Q Sbjct: 18 KKVAAYARVSMESERMHHSLSAQVSYYSKLIQKNPNWEYAGV-YADYGISGTGIKKRQE- 75 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F L+ E G I +L +S+ R +R V + ++ ++ + GI+V +N Sbjct: 76 -FRRMLEDAEAGKI---DIILTKSIQRFARNTV-DLLQTVRHLKELGIEVWFEKEN---- 126 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMT-ASCPRWLSL 180 I +++ L+ IL A A EES S +K ++KK + + C W Sbjct: 127 IHTMSGDGELMLTIL-ASFAQEESRSISDNIKWRFRKKFEQGIPHAKFFVYGYC--W--- 180 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 ++ V P+ + IF ++ R+ I + L ++ G + + + I ++ Sbjct: 181 --EKDNLVIQPEEAAIVREIFDAYLQGRTRKDILRELKRREIRTMYG--NYFKDASIRQI 236 Query: 241 LANKALIGIC----------VPSYRARGKGISE---IAGYYPRVISDDLF-YAVQEIR-L 285 L N+ G+ + +A G + ++ +IS D+F + QE++ Sbjct: 237 LTNRIYTGVLEMQKTFVTDPITKRQAVNHGERNRYVVEWHHEAIISSDMFEWVQQELKNR 296 Query: 286 APFGISNSSKNPMLIN--LLRTVMKCEACGNTM--IVHAVSGSLHGYYVC 331 G+ +N ++KC CG + +V G + Y+ C Sbjct: 297 KEMGMQRGGYARDFLNTSCFTGIIKCGICGKSYVHVVRKYKGRIREYWTC 346 >UniRef50_A5VBR4 Resolvase, N-terminal domain n=12 Tax=Alphaproteobacteria RepID=A5VBR4_SPHWW Length = 590 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 86/397 (21%), Positives = 155/397 (39%), Gaps = 59/397 (14%) Query: 3 KAIAYMRFSSPGQMSGD-SLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 +A Y+R S+ Q D S+ Q+R W Y+L TY + G SA + Sbjct: 6 RAALYLRVSTARQAEHDVSIPDQKRQGEAWCAARG-YHL-AETYVEAGASATNDRR---- 59 Query: 62 AFSEFLDAIEHGYILPGT--TLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 EF IE G P ++V S R R+ KL N G+ ++++ Sbjct: 60 --PEFQRMIEAGTTKPAPFDVVVVHSFSRFFRDHFELEFYVRKLAKN-GVKLVSITQ--- 113 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTI------MTAS 173 + ++P ++ ++A +S+ + V + K+ + +G + + A+ Sbjct: 114 ---EMGDDPMHVMMRQIMALFDEYQSKENAKHVMRALKENARQGFWNGALPPIGYRIIAA 170 Query: 174 CPRWLSLDDKRTAFVPDPDRVKTIELIFKLRMERRS------LNAIAKYLNDHAVKNFSG 227 R + K DP TI LIF+L +E + AI +LN A + F+ Sbjct: 171 EQRGAKVKKK---LEIDPLHADTIRLIFRLALEGDGSTGPMGVKAIVTHLN--ARRIFTR 225 Query: 228 KESAWGPSVIEKLLANKALIGICVPSYRARGKGI---SEIAGYYPRVISDDLFYAVQEIR 284 WG + ++L + IG + R + K + SE+ + D + + R Sbjct: 226 DGGRWGIGQLHRILTRRTYIGEHEFNKRTKAKELKPQSEVVVVPVPPLIDRETFDTVQAR 285 Query: 285 LAPFGISNSSKNPMLI--------NLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRL 336 L ++NP + LL + C CG M + G + YY C ++ Sbjct: 286 L-------KARNPKVTPARVVSGPTLLTGICYCARCGGAMTIRTGKGGRYRYYACSIKAR 338 Query: 337 H---RCDRPSIKRDLVDYNIINEL---LFNCSKIQPV 367 C+ +I D +D +I+ + + S+++ V Sbjct: 339 QGETGCEGRAIPMDKLDTVVIDHIEREFLDPSRLETV 375 >UniRef50_D2BJ82 SsrA integrase n=2 Tax=Dehalococcoides RepID=D2BJ82_DEHSV Length = 558 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 80/362 (22%), Positives = 143/362 (39%), Gaps = 44/362 (12%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 K+A+AY+R SS Q+ G SL+ Q RL E K N + + I Y + G SA + Sbjct: 12 KRAVAYLRVSSVSQIDGHSLDAQERLFKELCK-NRGWEIIRI-YREEGRSAHVEDIHKRP 69 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F + L + G ++V +LDR SR + IE L L+ + + + ++ ++ Y Sbjct: 70 IFKDLLGDAKKGMF---DVVVVHTLDRWSR-NLKVTIESLNLLGKYNVGLASIVESLDY- 124 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 + P ++ ++ A SE S+ +K +++ + +G + W + Sbjct: 125 ----SNPQGMLSLHMLGAFAQYFSESLSTHIKKGIEQRAVEGKRNGAVPFGYESCWEKEE 180 Query: 182 DKRTAFVPDPDRVKTI-----------ELIFKLRMERRSLNAIAKYLNDHAVKNFSGK-- 228 + +P+ + EL + +L+ +A +LND + + K Sbjct: 181 NGEKKRRCNPEHPGGVHIHRREGKAVKELYKRYAAGTVTLSELASWLNDEGFRTRNTKKI 240 Query: 229 ESAWGPSVIEKLLANKALIGICV--PSYRARGKGISE-IAGYYPRVISDDLFYAVQEIRL 285 E A G L A + + P Y + K + + G + +++ LF VQ+ Sbjct: 241 EDACGNLTTGPKLFTGASVRFILHNPFYMGKIKHRDKLLPGVHKPLVTKKLFDLVQDTLK 300 Query: 286 APFGISNSSKNPMLIN------LLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRC 339 NS ++ L LL+ + +C CG M Y R HR Sbjct: 301 -----KNSGRSSTLCPKSNREYLLKGLARCAYCGMPMWAQTYHNGGRYY------REHRA 349 Query: 340 DR 341 R Sbjct: 350 SR 351 >UniRef50_Q3K263 Prophage LambdaSa04, site-specific recombinase, resolvase family n=2 Tax=Streptococcus agalactiae RepID=Q3K263_STRA1 Length = 413 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 76/332 (22%), Positives = 141/332 (42%), Gaps = 45/332 (13%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 ++ AY R S+ DSL Q+ E VN + Y D G+S K K Sbjct: 15 QRVCAYTRVSTTNSSQLDSLENQKAYF-ETFYVNREDVDFLGVYYDKGISGSKEKRP--- 70 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREK--VGEAIERLKLILNHGIDVITLCDNTV 119 +F L+A G I + +S+ R +R V E LK + G+ + Sbjct: 71 SFQAMLEACRQGQI---DLIHTKSISRFARNTMTVLEVSRELKAL---GVGIYF----EE 120 Query: 120 YNIDSL-NEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWL 178 NI++L NE ++ ++A A EE + S + ++++K Q M + R++ Sbjct: 121 QNINTLSNEGEGMLS--VLASLAEEELQSMSDNQRWAFQRKFQRGE-----MVINTKRFM 173 Query: 179 SLD-DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVI 237 D D + V + + + IF+L ++ ++ IAK LN V + ++ W + + Sbjct: 174 GYDVDDKGELVINEAEAQIVRRIFQLYLDGMGMHRIAKLLNQENVPTVT--DAKWHDTTV 231 Query: 238 EKLLANKAL-----------IGICVPSYRARGKGISE--IAGYYPRVISDDLFYAVQEIR 284 +L N+ +GI P +G+ + + I + ++S +++ AVQ+ Sbjct: 232 RNILKNEKYKGTVLLQKYFHVGINGPKRLNQGQ-VEQYLIEDNHEPIVSKEVWQAVQDKL 290 Query: 285 LAPFGISNSSKNPMLINLLRTVMKCEACGNTM 316 + +K+ ++L KCE CG+T+ Sbjct: 291 ASKTWKQGVNKHYRFTSML----KCEYCGSTL 318 >UniRef50_Q5XBF4 Site-specific recombinase n=9 Tax=Bacteria RepID=Q5XBF4_STRP6 Length = 521 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 116/526 (22%), Positives = 215/526 (40%), Gaps = 83/526 (15%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 ++ Y R S+ + S Q R AE++ SD+ + Y D G+S K + G Sbjct: 26 RRVAGYARVSTDHEDQTTSYESQMRYYAEYISTRSDWEFVKM-YSDEGISGTNTK-LRVG 83 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 S DA+ L ++ +S+ R +R V +++ ++ + G+++ +N ++ Sbjct: 84 FKSMIEDALAGKIDL----IITKSVSRFARNTV-DSLTTVRKLKEVGVEIYFEKEN-IWT 137 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 +DS E I + L A EES S V +W ++Q A G + Sbjct: 138 LDSKGELLITIMSSL----AQEESRSISENV--TWGLRKQFA--EGKVHFPYTNVMGFEK 189 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 + V + + KT+ IF+ + ++ +IAK L + + SGK + W I+++L Sbjct: 190 GENGEIVVNQEEAKTVRYIFQQALLGKTPYSIAKDLTQQGILSPSGK-NHWSSVTIKRML 248 Query: 242 ANKALIGICVPS------YRARGKGIS--EIAGYY-----PRVISDDLFYAVQEIRLAPF 288 N+ G + + ++ K I+ E+ YY ++ + F AVQ Sbjct: 249 RNEKYKGDALLQKTYTIDFLSKKKNINKGELPQYYVENNHEAIVDKETFDAVQA------ 302 Query: 289 GISNSSKNPMLINLLRTVMKCEACGN---TMIVHAVSGSLHGYYVC--PMRRLHRCDRPS 343 + K L + + C CG+ + + H+ S Y C + +C P Sbjct: 303 SLDRKEKGKGSTTLFSSKLVCGDCGHYFGSKVWHSTSKYRRVIYQCNEKYKGEKKCTTPH 362 Query: 344 IKRDLV-DYNI--INELLFNCSK-IQPVENKKDANETLELK----------IIELQMKIN 389 + D + D+ + IN+++ N + IQ +E D E+ +L+ + QM ++ Sbjct: 363 VTEDEIKDWFVTAINKVISNKDEIIQNLEMLLDVGESSDLERRLVELETEVEVVTQM-VS 421 Query: 390 NLIVALSVAPEVT---------------AIAEKIRLLDKELRRASVSLKTLKS--KGVNS 432 NL+ ++ P+ A+ +I ++K+L A+ K LK K +N Sbjct: 422 NLVKENAIMPQDQDTYQKKYSNLVERHDALVSEIESIEKQLLEAASHQKDLKEFLKTLNQ 481 Query: 433 FSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGI 478 S+ + E L ++I I D +T I F NGI Sbjct: 482 QSELIS---------EFDELLWETMVDEIKIFCD-QTVAIKFKNGI 517 >UniRef50_A3DG42 Recombinase n=7 Tax=root RepID=A3DG42_CLOTH Length = 442 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 67/290 (23%), Positives = 128/290 (44%), Gaps = 32/290 (11%) Query: 6 AYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFSE 65 AY R S+ S Q ++ + DY I Y D G+S K + F++ Sbjct: 3 AYCRVSTDQLEQLSSYEAQVAYYTSYITNHPDYEFGGI-YADEGISGTNTKKREQ--FNK 59 Query: 66 FLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDSL 125 ++ + G I ++ +S+ R +R + + + ++ + GI VI +N I++L Sbjct: 60 MIEDCKAGKI---DMIITKSISRFARNTL-DTLNYVRQLKELGIGVIFEKEN----INTL 111 Query: 126 NEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD-DKR 184 + ++ IL + +E I + +W +R+ E G + + ++L D D+ Sbjct: 112 DSKGEVLLTILSSLAQDESRSISENS---TWGIRRR--FEQGKLHI-NHTKFLGYDKDEE 165 Query: 185 TAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLANK 244 V + + K + I+K ++ + N IA+ L + V N++GK W S I K+L+N+ Sbjct: 166 GNLVINEKQAKIVRRIYKDYLDGKGANRIARELEEEGVPNWNGK-PKWYESSIRKILSNE 224 Query: 245 ALIG--ICVPSY------RARGKGISEIAGYY-----PRVISDDLFYAVQ 281 G + +Y + R E+ YY P +I +++ AVQ Sbjct: 225 KYKGDALLQKTYTVDFLTKKRAVNNGEVPMYYVEESHPAIIDKEIWEAVQ 274 >UniRef50_A5ZMY9 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5ZMY9_9FIRM Length = 530 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 124/533 (23%), Positives = 204/533 (38%), Gaps = 91/533 (17%) Query: 19 DSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFSEFLDAIEHGYILPG 78 +S+ Q +LI E++ + D + I Y D G S A F ++ I G I Sbjct: 22 ESIENQMKLIREYVTKSEDLEIADI-YIDDGYSGLY--FANRPEFQRMMEDIYKGKI--- 75 Query: 79 TTLLVESLDRLSREKVGEA--IERLKLILNHGIDVITLCDNTVYNIDSLNEPYSLIKAIL 136 ++ + + RL RE + + IER+ L G+ I + D V ++ NE + K + Sbjct: 76 QGVITKDISRLGREHIETSNYIERVFPSL--GVRYIAILDG-VDSVHHSNEELAQFKTLF 132 Query: 137 IAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD-KRTAFVPDPDRVK 195 + + S K R L+ +KKR G M+ P D + F+ D + K Sbjct: 133 NDMYSRDIS--KKIRGALTAQKKR------GQFMSGFAPYGYVKDPADKHHFLVDEEAAK 184 Query: 196 TIELIFKLRMERRSLNAIAKYLNDHAV-------KNFSGKESA----------WGPSVIE 238 + IF + +E S + IAK LN + + G + A W I Sbjct: 185 VVRRIFYMSLEGYSRDGIAKKLNQEGILTPSEYKRKVQGLKYANALEKAGAKGWAYPTIN 244 Query: 239 KLLANKALIGICVP------SYRA-RGKGISE-----IAGYYPRVISDDLFYAVQEIRLA 286 +L N+ G V SY+ + + I E + G + +IS D F VQE+ Sbjct: 245 VILRNRVYTGAMVQHKSEKISYKVEKYQYIPEEQQYIVEGMHEAIISKDTFEQVQELMKK 304 Query: 287 PFGISNSSKNPMLINLLRTVMKCEACG-NTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIK 345 + +N ++ C CG N V G G Y + C IK Sbjct: 305 RTRTPGFNSEVRKVNPYAGIIVCGDCGYNFQRVTCRDGYECGTYHKKGNTV--CYSHFIK 362 Query: 346 RDLVDYNIIN------ELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAP 399 ++++D + N EL S + D + ++ + E +I L L+ Sbjct: 363 KEVLDSIVKNEIQRQAELALKESDKDEILKVADRKKEVQRRCAEADQQIERLQKELAAVQ 422 Query: 400 E---------VTAIAEKIRLL---------DKELRRASVSLKTLKSKGVNSFSDFYA--I 439 + V + +K L DK++ RA + L + + Y I Sbjct: 423 KYKKKTYENYVDGVLDKEEYLSYKAEYEKQDKDI-RAKIQLAEQEKDSFGEAEESYENWI 481 Query: 440 DLTSKNG--RELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKH---YPLMK 487 + K G E+ R + + EKI++N D K+ D IVFK+ YP+ K Sbjct: 482 EKFIKYGTLSEVTREIVTELIEKIVVNGD-KSID------IVFKYQSPYPVEK 527 >UniRef50_A7AY22 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AY22_RUMGN Length = 464 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 51/191 (26%), Positives = 92/191 (48%), Gaps = 18/191 (9%) Query: 3 KAIAYMRFSSPGQ-MSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 + + Y+R S GQ + GD+L Q L+ E++KVN +DT D L+A K K + Sbjct: 16 RVVKYIRCSHDGQVLHGDTLEAQDALLDEFIKVNRMVLVDTFV--DEALTARK-KFTRRK 72 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F LD + +L LDR R +G+ + +++ +G+ + ++ Y+ Sbjct: 73 EFVRLLDGVRSRSF---DMILFTKLDRWFR-NIGDYHKIQEILEENGVQWKAITES--YD 126 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 + N + + +AQ +E + S R+K + K L++ T ++ S PR L LD Sbjct: 127 TTTTNGRLHINIRLSVAQ---DECDRDSDRIKDVFAYK----LKNKTYLSGSLPRGLKLD 179 Query: 182 DKRTAFVPDPD 192 D++ + DP+ Sbjct: 180 DEKHVII-DPE 189 >UniRef50_B1R8L3 Resolvase, N domain family n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R8L3_CLOPE Length = 507 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 104/412 (25%), Positives = 166/412 (40%), Gaps = 66/412 (16%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 KK I R SS Q Q I ++++ N+ + I E G+S + K + Sbjct: 4 KKIIVLHRVSSDSQ----DFESQNNAIEDYIRENNIVVDEYIKEE--GISGYSNKLFERE 57 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSRE-KVGEAIERLKLILNHGIDVITLCDNTVY 120 A + D + TL+V +LDR+ R +V E +++L T CD VY Sbjct: 58 AIKKIYDM---ALLDELDTLIVFNLDRIGRTTEVAEFLKKL-----------TYCDVKVY 103 Query: 121 NIDS--LN---EPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCP 175 ++ LN + LI I + A ES+ S RV+ + + L SG + Sbjct: 104 SVTEGLLNGGEDTQDLINYIK-SFSAQMESKKTSLRVRSGKEATNKKGLFSGGTVNFGYG 162 Query: 176 RWLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPS 235 + + FV + + K + LIF L M+ + ++L + + + + + Sbjct: 163 V-----ENQKMFVIEKE-AKIVRLIFDLYMKEGKAGTV-RFLKEKGI---TKRGRPFSHH 212 Query: 236 VIEKLLANKALIGICV----------PSYRARGKGISEIAGYYP-----RVISDDLFYAV 280 ++ +L + IG+ P+ +AR K E + P R+ISDDLFY V Sbjct: 213 MVNDILKDTIYIGLKRYGHYILIDKDPTIKAR-KFSKESMKFQPYNESLRIISDDLFYKV 271 Query: 281 QE-IRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMI--VH-AVSGSLHGYYVCPMRRL 336 QE I+ N +K N+L + CG+ I +H +G Y+ R Sbjct: 272 QEKIQGNTIKKGNVTKLTNKTNVLFEGLLYHRCGDREIRKLHLDRKKDKYGNYIYSYRCS 331 Query: 337 HRCDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLELKIIELQMKI 388 H C R K N+I + C K PV + N L I EL+ KI Sbjct: 332 H-CRRQFYK------NVIK--TYGCKKYNPVIEEHILNNLSLLSIEELEQKI 374 >UniRef50_C0ESV4 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ESV4_9FIRM Length = 566 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 70/324 (21%), Positives = 127/324 (39%), Gaps = 48/324 (14%) Query: 55 GKHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKV--GEAIERLKLILNHGIDVI 112 G + + F+E + I+ G I ++V+ L RL R V G IER+ N + I Sbjct: 82 GTNFERDGFNEMMQDIKEGNI---DCVIVKDLSRLGRNYVEAGSYIERVFPFFN--VRFI 136 Query: 113 TLCDNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTA 172 ++ D+ DS + SL+ ++ +N +E S + + + + +G + Sbjct: 137 SVNDH----YDSFRDDISLLISM-----SNVYNEFYSRDLAKKIRSSYRTSWANGEFPSG 187 Query: 173 SCPRWLSLD-DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLN------------D 219 D D +PDP ++ IF+ ++ + IA+ LN D Sbjct: 188 QMAYGYEKDKDNPHQLIPDPVAAPVVKKIFQYFIDGMTYAEIARKLNADGYLCPKAYKLD 247 Query: 220 HAVK-NFSGKESAWGPSVIEKLLANKALIGICV------PSYRARGKGISE------IAG 266 A K N W + K+L N+ G V S+ A+ + +++ I Sbjct: 248 KAGKANEKSATWTWSGGTVHKILENQYYAGDSVHNQFTNDSWAAQRQKMNQKEEWIIIKN 307 Query: 267 YYPRVISDDLFYAVQE-----IRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAV 321 + ++S F VQE ++ ++ N N + + C CG TM ++ Sbjct: 308 THEALVSRKDFDEVQEKIGHIVKRVNEARKSNGNNVRDFNFFKQKIVCADCGKTMYLYGK 367 Query: 322 SGSLHGYYVCPMRRLH-RCDRPSI 344 + H + C +LH +C SI Sbjct: 368 TKGNHRRFYCGNNKLHGKCTPHSI 391 >UniRef50_B1QS28 Site-specific recombinase n=2 Tax=Clostridium butyricum RepID=B1QS28_CLOBU Length = 538 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 51/186 (27%), Positives = 88/186 (47%), Gaps = 46/186 (24%) Query: 271 VISDDLFYAVQEI----RLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLH 326 VI DD + VQ I + F + + NP L L + KC+ CG+ MIV +G + Sbjct: 295 VIDDDTWLKVQRILDRNKNKDFKRTGTGNNPAL---LSGIFKCKKCGSNMIVRR-TGEYY 350 Query: 327 GYYVCPMRRLHR----CDRPSIKRDLVDYNIINEL--LFNCSKIQPVEN----------- 369 YY+C ++H+ C+ +++ D +D N+I++L N I+ + N Sbjct: 351 -YYICS-SKVHKIGSSCNCKNVRVDQLDNNVISQLKNYSNSLLIEELSNSVAKFESIESN 408 Query: 370 -------KKDANETLELKIIELQMKINNLIVALSVAPEVTAIAEKIRLLDKELRRASVSL 422 KK+ N +++ +NNLI +S+AP IAE ++ ++ + + Sbjct: 409 SSNSDNLKKELNSKVDM--------VNNLIKRISLAPS-DDIAE---MIMNQISDINKEI 456 Query: 423 KTLKSK 428 K+LKSK Sbjct: 457 KSLKSK 462 >UniRef50_D1AH67 Recombinase n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AH67_SEBTE Length = 469 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 68/152 (44%), Gaps = 33/152 (21%) Query: 200 IFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLANKALIGICVPSYRARGK 259 +F+L ++ SLN IAK N G + ++++L NK IGI V + Sbjct: 191 MFQLALKGESLNNIAKKHN-------------MGYTTVKQILMNKTYIGINVYGKYIYFQ 237 Query: 260 G--------ISEIAGYYPRVISDDLFYAVQEI----RLAPFGISNSSKNPMLINLLRTVM 307 G I E+ G + +I D FY+VQEI I+++ K LL V+ Sbjct: 238 GKRIKTNDDIIEVPGNWESIIDHDTFYSVQEIIEKRSFKKIRITDNEK-----YLLGGVV 292 Query: 308 KCEACGNTMIVHAVSGSLHGYYVCPMRRLHRC 339 C CG + + + + YYVC +++ RC Sbjct: 293 FC-YCGWKL--YGTTLRNNQYYVCSNKKICRC 321 >UniRef50_Q67SM2 Site-specific recombinase n=1 Tax=Symbiobacterium thermophilum RepID=Q67SM2_SYMTH Length = 532 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 88/375 (23%), Positives = 146/375 (38%), Gaps = 62/375 (16%) Query: 1 MKKAIAYMRFSSPGQMS-GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 +++A AY+R S+ Q G+SL Q+ + W K N Y+ Y D G SA Q Sbjct: 33 LRRAAAYIRVSTGMQAEEGESLPAQQARLHAWAKENG--YVIVREYVDAGESARTADRPQ 90 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 F L + P ++LV DR +R ++ + G++++++ T Sbjct: 91 ---FVRMLQDAK-AQPRPFDSVLVWKWDRFARNMEDASMYKALFRRRLGVELVSITQPTP 146 Query: 120 YN-IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWL 178 + L E ++ I Q A + S+ L+ E G RWL Sbjct: 147 EGAVGQLLE--RMLDLIAEFQSALTAENVYSTMAYLA---------EQG--------RWL 187 Query: 179 S-------LDDKRTAFVPDPDRVKTIELIFKLRMER-RSLNAIAK-YLNDHAVKNFSGKE 229 L D R V PD + + F++ R RS+ AIA+ + + + Sbjct: 188 GKRPFGYDLRDGR--LVIKPDEAEAVAWAFRMVARRERSVYAIAEGFGTGNPFPATLARG 245 Query: 230 SAWGPSVIEKLLANKALIGICVPSYR------ARGKGISEIAGY------------YPRV 271 W P+ + K+L N+ IG + R GK ++I GY +P + Sbjct: 246 YKWSPTAVRKMLQNEVYIGRATWNRRYTDIDHVDGKS-TKIRGYRDPSDWITVENAHPAI 304 Query: 272 ISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVC 331 + ++ F AVQ + L + S K+ L +++C CG+ + H S VC Sbjct: 305 VDEETFEAVQRV-LEEYS-SRYPKSKRGEYLFWGMVRCARCGHHLTWHETKKS-PARLVC 361 Query: 332 P--MRRLHRCDRPSI 344 R H RP + Sbjct: 362 SEYFRPRHMACRPMV 376 >UniRef50_A3DG43 Recombinase n=6 Tax=root RepID=A3DG43_CLOTH Length = 429 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 82/336 (24%), Positives = 144/336 (42%), Gaps = 46/336 (13%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 + AY R S+ G+SL Q + + N DY + + D G++ G Sbjct: 18 RVCAYARVSTGSDAQGESLENQIQYYENLISNNPDYEYAGV-FADRGIT---GTTDNRPE 73 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREK--VGEAIERLKLILNHGIDVITLCDNTVY 120 F L+ + G I ++ +S+ R +R + + + LK I G+++I + Sbjct: 74 FQRMLNLAKEGKI---DLIITKSISRFARNTAIMLQVVRELKDI---GVEIIFEKE---- 123 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 NI +L+ L+ +L + A EES+ S +K KKK E G ++ + R+L Sbjct: 124 NIRTLSGDGELMLTVL-SSFAQEESKNISDNLKWRVKKK----FERGELIINTT-RFLGY 177 Query: 181 D-DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEK 239 D D+ V +P + ++ IF+ ++ + IAK LN+ V +G W S I Sbjct: 178 DKDEYGDLVINPKEAEIVKRIFEDYLKGKGTFTIAKELNEDKVPTVAG--GRWQESTILN 235 Query: 240 LLANKALIGICV------PSY----RARGKGISEIAGYY-----PRVISDDLFYAVQ-EI 283 +L N+ G + P + R +G+ I YY ++S +++ VQ EI Sbjct: 236 ILKNEKYKGDAILQKYYTPDHLRKVSVRNEGV--IDSYYIEDNHSPIVSREMWEQVQIEI 293 Query: 284 -RLAPFGISNSSKNPMLINL--LRTVMKCEACGNTM 316 R A + + N L ++ C CG+T+ Sbjct: 294 ARRAKAKGNKAGDTKKYTNRYPLTGMLFCSKCGSTL 329 >UniRef50_C6CZ76 Resolvase domain protein n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CZ76_PAESJ Length = 431 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 74/337 (21%), Positives = 140/337 (41%), Gaps = 38/337 (11%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 + + Y R S Q S++ Q+ L E +K + + D Y D +SA K + + Sbjct: 2 RTVLYARSSISTQ--EHSIDMQKALALEKIKNKGELFDDL--YLDEAVSARKTELKERPE 57 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV-YN 121 + + I+ G + T++ V DRL+R V +AIE +L +H + VI DN + Sbjct: 58 LNRLMYDIKRGLV---TSVYVYKRDRLAR-NVIQAIELFELFRSHQVKVIFTADNEIPIQ 113 Query: 122 IDSLNEPYSLIKAILIAQRANE-ESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 E + LI A + AN+ IK ++ ++ RQ SG I Sbjct: 114 YSPAGEFFELIIAGFNQREANQIVQRIKETKYTMT----RQGKHASGRIAYGYSV----- 164 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 D+ + + ++ +T+ I+ + ++ + + A + D ++N + W ++ + Sbjct: 165 -DQDKKYRVNEEQAETVRKIYNMLIDT-NCSTFADVVRD--MQNQPWFPTRWDYFRVQSI 220 Query: 241 LANKALIGICVPSYRARGKGISEIAGYYP-----RVISDDLFYAVQEIRLAPFGISNSSK 295 + N GI + I E + VI D+L + + RL+ S + Sbjct: 221 IKNSMYKGI---------RKIEEFGEFVEIENENLVIVDELTWDKAQARLSSLKQPRSRQ 271 Query: 296 NPMLINLLRTVMKCEACGNTMIVHAVSG-SLHGYYVC 331 N + +L ++ C CG M+ ++ + YY C Sbjct: 272 NNRVPMMLDGLLICGKCGEQMLGKEITDINTRSYYTC 308 >UniRef50_C2BG59 Phage site-specific recombinase n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BG59_9FIRM Length = 455 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 81/349 (23%), Positives = 142/349 (40%), Gaps = 47/349 (13%) Query: 1 MKKAIAYMRFSSPGQM-SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 M +A Y+R S+ Q+ G S++ Q+ + + K Y Y D G++A K K+ Sbjct: 3 MVRAALYIRVSTEEQVREGYSVDAQKENLIRYAKFKG--YTVVDIYADEGITARK-KYTN 59 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 F LD +E I +L LDR R VG+ + +++ +G+ +N Sbjct: 60 RKEFMRLLDDVEADKI---DIILFIKLDRWFR-NVGDYYKVQEILERNGVGWTATTEN-- 113 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 Y+ + N + + +AQ +ES+ S R+K + KK +D G + P Sbjct: 114 YDTTTANGRLYVNIRLAVAQ---DESDRTSERIKFVFDKKIKD----GEAIWGKPPFGYK 166 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEK 239 + +K V D + I F+ RS+NA+AK +N K S + + Sbjct: 167 IKNK--ILVKDEEVEGFINECFESYKVLRSINAVAKTMNQKHNKKIS-------YTTYSR 217 Query: 240 LLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLF---YAVQEIRLAPFGISNSSKN 296 L + Y+ + K + Y+P +S++ + A+ + R FG + N Sbjct: 218 FLRKN------LDFYKGKYK---DNENYFPPYLSEEDYEEILAINKARSGRFG--GKTYN 266 Query: 297 PMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIK 345 + + LL C CG M +G R ++C R ++K Sbjct: 267 YIFVGLL----ACACCGYNM---GSAGYTTNRRTNQKYRYYKCGRSTVK 308 >UniRef50_C6GWI0 Site-specific recombinase n=1 Tax=Streptococcus suis BM407 RepID=C6GWI0_STRS4 Length = 524 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 64/278 (23%), Positives = 115/278 (41%), Gaps = 39/278 (14%) Query: 1 MKKAIAYMRFS--SPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHA 58 M +A Y+R S + +S+ QR L+ ++ + + D E+ G Sbjct: 1 MAQACIYLRLSRDDGDNVESNSIINQRSLLRDYARNH-----DITILEEFVDDGISGLTF 55 Query: 59 QSGAFSEFLDAIEHGYILPGTTLLVESLDRLSRE--KVGEAIERLKLILNHGIDVITLCD 116 F+ ++ I + I T++V+ L R R+ + G+ I+R+ + G+ I++ D Sbjct: 56 NRPDFNRMMENINNKTI---DTIIVKDLSRFGRDYIETGKYIQRIFPAM--GVRFISVND 110 Query: 117 NTVYNIDSLNEPYSLIKAILIAQRANEESEIK--SSRVKLSWKKKRQDALESGTIMTASC 174 + DSL + ++ + +S + S++V+ + K KR G + A Sbjct: 111 H----YDSLTADANETHLVMPIKSLINDSYCRDISTKVRSTHKAKRL----KGEFIGAFA 162 Query: 175 PRWLSLDDK-RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLND--------HAVKN- 224 P D + + V D IE IF L++E S N IA YLN H +N Sbjct: 163 PYGYQKDPRQKNHLVVDESIRSIIEKIFTLKLEGYSSNQIAIYLNQCGIETPLQHKKRNQ 222 Query: 225 -----FSGKESAWGPSVIEKLLANKALIGICVPSYRAR 257 F G + WG ++ ++L N+ G R + Sbjct: 223 EKLRGFCGHTNKWGTKMVNRILTNRVYTGALEQGKRTK 260 >UniRef50_A7B0Q2 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A7B0Q2_RUMGN Length = 552 Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust. Identities = 84/385 (21%), Positives = 149/385 (38%), Gaps = 59/385 (15%) Query: 1 MKKAIAYMRFS-------SPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAF 53 M A Y+R S + DS++ QR L +++ D L I +D + Sbjct: 6 MYHAAIYLRLSRDDEDIDGSAKRESDSISSQRELARSFVREQPDMELFDIYIDD----GY 61 Query: 54 KGKHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVIT 113 G + F + IE+G + ++V+ L R R+ + K + I Sbjct: 62 SGANFDRPDFKRMMADIENGNV---NCVVVKDLSRFGRDYIEAGRFIQKTFPAFSVRFIA 118 Query: 114 LCDNTVYNIDSLNEPYSLIKAILIAQRANEESEIK--SSRVKLSWKKKRQDALESGTIMT 171 + D+ DSL S ++ + +S + S +VK + KR E G + Sbjct: 119 ITDH----YDSLTADQSTTSLVIPVKNFVNDSYCQDISEKVKSHQRVKR----EKGKFIG 170 Query: 172 ASCPRWLSLD-DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAV-------K 223 A D + + V D K ++ IF +++ S AIA LN++ + K Sbjct: 171 AFAVYGYQKDHEDKNKLVIDEYAAKIVKNIFTWKLDGMSNLAIANRLNENGIFSPLEYKK 230 Query: 224 NF---------SGKESAWGPSVIEKLLANKALIGICVPSYRAR---------GKGISE-- 263 ++ +G S W ++++L N+ G+ V R + K SE Sbjct: 231 SYGEHYSTGFQAGIVSKWSAVAVKRILTNEIYTGMMVQGKREKVNYKVDKILEKPESEWF 290 Query: 264 -IAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMI--VHA 320 + G + +IS + + VQ RL + + K ++ ++ C C M+ ++ Sbjct: 291 KVEGTHEAIISKEDYQNVQ--RLLKVD-TRAGKGKEKAHMFSGLLFCGDCKEPMVRRINR 347 Query: 321 VSGSLHGYYVCPMR-RLHRCDRPSI 344 G+ YY+C R R C R SI Sbjct: 348 YKGTEKIYYICSTRNRSEGCSRHSI 372 >UniRef50_A5ZV57 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A5ZV57_9FIRM Length = 542 Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust. Identities = 74/344 (21%), Positives = 140/344 (40%), Gaps = 56/344 (16%) Query: 7 YMRFSSPG--QMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFS 64 Y+R S + DS+ QR+L+ E++ + D+ L + +D F G + F Sbjct: 15 YIRLSREDGDKEESDSVGNQRKLLTEYVNKHDDFILYDVYIDD----GFTGTNFNRPDFH 70 Query: 65 EFLDAIEHGYILPGTTLLVESLDRLSREKV--GEAIERLKLILNHGIDVITLCDNTVYNI 122 + IE + ++V+ L R R+ + G +ER+ LN + I++ D NI Sbjct: 71 RMIADIEDNKV---NCVVVKDLSRFGRDYIDTGRYLERIFPELN--VRFISVTD----NI 121 Query: 123 DSLNEPYSL---IKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 DS+ + Y + IK I Q A + S++++ + K K++ G + + + Sbjct: 122 DSMKQAYDMLLPIKNIFNEQYARD----ISNKIQATVKSKQKAGEFIGAFTSYGYKKSPA 177 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAV------KNFSG------ 227 + V D + ++ +F + + +IAK LN + K +G Sbjct: 178 ---NKNKLVIDEYASEVVKRVFTMYAQGIGKQSIAKILNAEGILCPSEYKKLNGENYKNC 234 Query: 228 ----KESAWGPSVIEKLLANKALIGICVPS-----YRARGKGISE-----IAGYYPRVIS 273 K S W S I+ +L N+ IG V R++ + + + + + +I Sbjct: 235 NRLEKTSYWTYSTIKVMLQNELYIGNMVQGKKHQRMRSKQRPVEKENWIRVENTHEPIID 294 Query: 274 DDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMI 317 L+ VQ++ + N N+ +KC CG M+ Sbjct: 295 RQLWDKVQKLLTKKHRDIDLETNK---NIFAGFIKCGDCGRAMM 335 >UniRef50_D2R2S5 Resolvase domain protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R2S5_9PLAN Length = 228 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 61/246 (24%), Positives = 105/246 (42%), Gaps = 32/246 (13%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 +A Y+R S GQ+ G RQ+ I + S + +ED A+ G A A Sbjct: 7 EAFGYVRVSGKGQVKGHGPTRQKEDIQRF--AESQGFEVVRAFED----AWSGTEADRPA 60 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F E L I G P ++VESLDRLSR+ + + + L ++ GI +I NT ++ Sbjct: 61 FVEMLSTIMGGG--P-RVVIVESLDRLSRDLMIQ-TQLLAKLVTEGIRLI--AANTGEDV 114 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 + + + +A++ Q +E+ S + +K R+ +S C + Sbjct: 115 TAAMQDDPMRRAMIQIQGVF--AELDKSLLVRKLRKGRESKRQS----QGKC-------E 161 Query: 183 KRTAFVPDPDRVKTIELIFKLRME-----RRSLNAIAKYLNDHAVKNFSGKESAWGPSVI 237 R AF + + +LR + RRS IA+ LN + +G+ W S + Sbjct: 162 GRKAFGEKQGEQAIVARMLELRRKPKGGARRSFQTIAEILNTEKLPTRTGR--PWSGSTV 219 Query: 238 EKLLAN 243 +++ Sbjct: 220 AAIISR 225 >UniRef50_Q0AWY2 Site-specific recombinase, putative n=7 Tax=Clostridiales RepID=Q0AWY2_SYNWW Length = 551 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 82/376 (21%), Positives = 145/376 (38%), Gaps = 82/376 (21%) Query: 7 YMRFSSPGQMSGDS---LNRQ---RRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 Y R S ++ GDS LN++ ++ A+ N+ Y++D + G + Sbjct: 18 YCRLSRDDELQGDSNSILNQKAILQKFAADNGLGNTQYFVD---------DGYSGTNFDR 68 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSRE--KVGEAIERLK-------LILNHGIDV 111 + + ++ G + T++V+ + RL R+ KVG E + + +N+G+D Sbjct: 69 PDWQRLMALVDEGKV---GTIIVKDMSRLGRDYLKVGMYTEMIFPNADIRFIAINNGVDS 125 Query: 112 ITLCDNTVYN-IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIM 170 D+ I+ NE Y+ + S +++ +K K ESG + Sbjct: 126 ANQQDSDFTPFINIFNEFYA---------------KDTSKKIRAVFKAKG----ESGKPL 166 Query: 171 TASCPRWLSLD-DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLND--------HA 221 + P D D + ++ D D K + IFKL M+ IAK L + HA Sbjct: 167 CTNVPYGYKKDPDDKHHWLVDKDAAKVVREIFKLCMDGYGPTQIAKLLTERRIENPTSHA 226 Query: 222 --------VKNFSGKESAWGPSVIEKLLANKALIGICV--PSYRARGKGISEI------- 264 V+ F W + + +L+ IG V +YR K ++ Sbjct: 227 KRNGLNPPVRQFYDDPYLWRDTTVTHILSRMEYIGHTVNFKTYRKSYKNKKQMHNDPSQW 286 Query: 265 ---AGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAV 321 + +I + +F VQ+IR ++ + P+L +L C CG + Sbjct: 287 QIFKNTHEAIIDEAVFEIVQKIRDGRRRVTPLGEMPILSGMLF----CADCGAKLYQVRG 342 Query: 322 SGSLHG--YYVCPMRR 335 G H Y+VC R Sbjct: 343 RGWEHSKEYFVCATYR 358 >UniRef50_UPI0000F53A4D Resolvase domain protein n=1 Tax=Listeria monocytogenes FSL J2-071 RepID=UPI0000F53A4D Length = 517 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 66/257 (25%), Positives = 106/257 (41%), Gaps = 44/257 (17%) Query: 191 PDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLANKALIGIC 250 PD K IE IFK +E S +AK LN+ + F+ K S W S I +L N G Sbjct: 188 PDEAKVIEQIFKWALEGVSAYQVAKRLNEKNI--FTRKGSKWQDSGINNILHNIVYTGTM 245 Query: 251 V-------PSYRARGKGISEIAGY-----YPRVISDDLFYAVQE---IRLAPFGISNSSK 295 + +R + K E+ Y +P +IS + + VQE +R G S S+ Sbjct: 246 IHQRYFNDDQFRKK-KNNGELPMYRIDNNHPPIISWEDYERVQELITLRANAKGTSKGSQ 304 Query: 296 NPMLINLLRTVMKCEAC------------GNTMIVH-AVSGSLHGYYVC---PM--RRLH 337 + + C+ C GNT +V + +G L C P+ L Sbjct: 305 KYSQRYVFTKRIICDKCGCNYKRVHIAGKGNTKVVKWSCTGHLKNKDGCDALPITDESLK 364 Query: 338 RCDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANE----TLELKIIELQMKINNLIV 393 + + ++ + I+ E L N PVE K E ++E+ I+ ++++ + Sbjct: 365 TAYLTMLNKLILGHTIVLEPLINT----PVEGKASKQELEKLSIEITKIDEKLEVLASLN 420 Query: 394 ALSVAPEVTAIAEKIRL 410 A V TA+ E+ RL Sbjct: 421 ASGVVSTKTALEEQGRL 437 >UniRef50_B2IQ45 Site-specific recombinase, resolvase family n=19 Tax=Firmicutes RepID=B2IQ45_STRPS Length = 597 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 76/339 (22%), Positives = 142/339 (41%), Gaps = 43/339 (12%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 +K+ AY R SS + +S + Q R E++ SD+ L I Y D G+S + Q Sbjct: 26 LKRVAAYCRVSSDSEDQKNSYDSQVRHYKEYISQRSDWELADI-YADEGISGTQVGKRQD 84 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 F ++ +G I ++ +++ R +R + + ++ ++++ + I V + Sbjct: 85 --FQRLINDCANGEI---DYIVTKAIARFARNTL-DTLKYVRMLKDMQIGVYFEEE---- 134 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 NID+L L+ IL + A +E E S+ VK K K ++ G ++ Sbjct: 135 NIDTLTMDGELLLTIL-SSVAQQEVENTSAHVKKGLKMK----MQRGELVGFQGCLGYDY 189 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 D + + K + IF+ +E IA+ L++ K+ G E W + + + Sbjct: 190 DVETKQISINKKEAKIVRYIFERYLEGIGGKVIARELDELGYKSPRGLEH-WNDTTVLGI 248 Query: 241 LANKALIGICV--------PSYRARGKGISEIAGYYPR-----VISDDLFYAVQEIRLAP 287 + N+ G + P + R E YY + +IS + F QEIRL Sbjct: 249 IKNEKYKGDILMGKTFTVDPISKRRLSNFGEEDKYYIKDNHEPIISKEDFEKAQEIRLRR 308 Query: 288 FGISNSSKNPMLINLLR----------TVMKCEACGNTM 316 G ++ N +N R ++++C CG+ + Sbjct: 309 AGNKKTAAN---VNGKRERYSKMYAFSSMLECGFCGSIL 344 >UniRef50_A8SDY9 Putative uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SDY9_9FIRM Length = 579 Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust. Identities = 81/364 (22%), Positives = 144/364 (39%), Gaps = 51/364 (14%) Query: 7 YMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLD---TITYEDLGLSAFKGKHAQSGAF 63 Y R S+ + ++L Q EW K+ + D Y D G++ G AQ Sbjct: 6 YARVSTEHEAQINALGNQ----LEWYKIEGSRHSDWEIVEVYVDQGIT---GTQAQKRP- 57 Query: 64 SEFLDAIEHGYILPGTTLLVESLDRLSREKVG--EAIERLKLILNHGIDVITLCDNTVYN 121 EFL IE ++ + R +R V I LK + G+++ + D Sbjct: 58 -EFLHMIEDAKKGKFDLIITREVSRFARNTVDTLSYIRELKAV---GVNLFFINDGINTA 113 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 D Y ++ +++ A +ES S RVK + R+ + G R Sbjct: 114 TD-----YGELRLTIMSSLAQDESRKISERVKAGQEISREKHVLYGNGNILGYRR----- 163 Query: 182 DKRTAFVPDPDRVKTIELIFKL-RMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 + +VPDPD+ +T++LI+++ + L +A L + SG S W S + ++ Sbjct: 164 -ENGTYVPDPDQAQTVKLIYQMYSTGKVGLQKVAAELYRLGRLDASGHVS-WDASKVSRV 221 Query: 241 LANKALIG-ICVPSYRARG-------KGISE-----IAGYYPRVISDDLFYAVQEIRLAP 287 L N G IC + G K + E + G + ++S++ + Q+I + Sbjct: 222 LHNATYKGCICYNKSHSDGYLTQKRVKNLDESSYVYVKGDFEPLVSEETWDRCQQILTSK 281 Query: 288 FGI---SNSSKNPMLINLLRTV----MKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCD 340 N K+ + N +++ ++C +CG I + G + + R Sbjct: 282 SERVIDENGKKHKYMRNTPKSIWTAKLRC-SCGAGFIQFKWRVNRDGAVIHGFQCYRRTR 340 Query: 341 RPSI 344 RPSI Sbjct: 341 RPSI 344 >UniRef50_C8VVS3 Resolvase domain protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VVS3_DESAS Length = 543 Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust. Identities = 87/372 (23%), Positives = 142/372 (38%), Gaps = 65/372 (17%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTI-TYEDLGLSAFKGKHAQ 59 K+ AY R S+ + +S + V +YY I +ED + A+ Sbjct: 22 QKRVCAYCRVSTDSREQHNSFS-----------VQLEYYKSFIENHEDWQFAGIYADEAR 70 Query: 60 SGA-------FSEFLDAIEHGYILPGTTLLVESLDRLSREKVG--EAIERLKLILNHGID 110 SG F + E G + ++ +S+ R +R V +AI RLK + G+ Sbjct: 71 SGTKLQKRDDFLRMMKDCEDGKV---DMIITKSVTRFARNTVDSIQAIRRLKEL---GVA 124 Query: 111 VITLCDNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIM 170 V +N I+SL+E + IL + A E+E S+ K + K+ QD GT + Sbjct: 125 VFFEKEN----INSLSEKSEQMLTIL-SSLAQGEAESVSTNNKWAAIKRFQD----GTFI 175 Query: 171 TASCPRWLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKES 230 + P + D+ V + + IF + + AIAK L++ + E Sbjct: 176 LGT-PAYGYTKDENGELVIQEEAAAVVRRIFHEYLNGKGTYAIAKDLSEEGLPTIRSAEK 234 Query: 231 AWGPSVIE----------KLLANKALIGICVPSYRARGKGISEIAGY-----YPRVISDD 275 W VI+ KLL K + +P R R KG ++ Y + +IS D Sbjct: 235 -WNDGVIKEMLLNPIYTGKLLHQKTMTTEVLPFRRQRNKG--QLPQYLIEDNHAAIISQD 291 Query: 276 LFYAVQEI---RLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCP 332 V+EI R G+ + K ++ C CG+ + Y P Sbjct: 292 QAEEVKEIFEYRRKQMGVDDLEKYQSRYAFSSKIL-CGECGSLFRRQKI------YIGKP 344 Query: 333 MRRLHRCDRPSI 344 ++ C R I Sbjct: 345 YEKIQWCCRQHI 356 >UniRef50_A5N185 Recombinase-related protein n=6 Tax=Bacteria RepID=A5N185_CLOK5 Length = 401 Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust. Identities = 74/324 (22%), Positives = 130/324 (40%), Gaps = 62/324 (19%) Query: 45 YEDLGLSAFKGKHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLI 104 Y+D G F G A F L I G I ++++ L RLSR+ V I +L Sbjct: 35 YKDDG---FTGTDADRDDFQRLLSDICTGKI---NCVIIKDLSRLSRDYVEVDILIDRLF 88 Query: 105 LNHGIDVITLCDNTVYNIDSLNEPYSLIKAIL-IAQRANEESEIKSS---RVKLSWKKKR 160 + + I+L + IDS N+P S+ ++ I N++ ++S R + +KK+ Sbjct: 89 VQMNVRFISLHER----IDSYNDPDSVSNMVVPITNVMNDQYCYQTSKKIRQVVDYKKR- 143 Query: 161 QDALESGTIMTASCPR-WLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLND 219 +G + + P ++ + + A + D + + ++ IF + + ++ AI +LND Sbjct: 144 -----NGEFIGSYAPYGYIKDPNDKHALLVDREAAEVVKQIFAMFLNGMAVRAIVNHLND 198 Query: 220 HAV------KNFSG---------KESAWGPSVIEKLLANKALIGIC------VPSYRARG 258 H V K G + W + +L N IG V SY+ Sbjct: 199 HGVMCPSLYKQSQGLKYSCPNGQAKPMWSTITVTNMLKNPVYIGDMAQGRNRVKSYKIHK 258 Query: 259 -KGISE-----IAGYYPRVISDDLFYAVQEI-----RLAPFGISNSSKNPMLINLLRTVM 307 + + E + + ++ + F V+++ R AP K L L + Sbjct: 259 IEAVPEEDWIVVQNTHEPLVDRETFEKVKQLLKRDTRTAP-------KQKQLY-LFSGFL 310 Query: 308 KCEACGNTMIVHAVSGSLHGYYVC 331 +C CG M S L+ YY C Sbjct: 311 RCADCGRAM-SRIASKELYVYYQC 333 >UniRef50_C4XT98 Putative uncharacterized protein n=2 Tax=Desulfovibrio magneticus RS-1 RepID=C4XT98_DESMR Length = 237 Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust. Identities = 44/144 (30%), Positives = 72/144 (50%), Gaps = 21/144 (14%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 M +A Y+R S GQ+ GD RQ I E+ K + ++ + D G+S G Sbjct: 13 MNRAFGYVRVSGKGQVDGDGPERQELAIREYAKAHGLEVVE--VFMDGGVS---GTVEDR 67 Query: 61 GAFSEFLDAIE---HGYILPGTTLLVESLDRLSRE-KVGEAIERLKLILNHGIDVITLCD 116 A +E + ++E HG T+++E LDRL+R+ V E I ++ HG+++I+ Sbjct: 68 PALAEMMVSLEQNGHGV----RTVIIEKLDRLARDLMVQEGI--IRDFQQHGVELIS--- 118 Query: 117 NTVYNIDSL-NEPY-SLIKAILIA 138 V D L N+P L++ +L A Sbjct: 119 -AVEGADLLSNDPTRKLVRQVLGA 141 >UniRef50_C3WED2 Resolvase domain-containing protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WED2_FUSMR Length = 459 Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust. Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 23/165 (13%) Query: 211 NAIAKYLNDHAVKNFSGK-ESAWGPSVIEKLLANKALIGICVPSYRA-RGKGISE---IA 265 N +LN +++ + K + +WG ++++L N G R+ R K E + Sbjct: 166 NIYEDFLNGYSLNQINNKLQFSWGSKQVKRILTNPTYKGYIRYGTRSNRKKNNREAFIVK 225 Query: 266 GYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSL 325 G++ +I +D + VQE+ S+ P L L ++KC+ CGN I GS Sbjct: 226 GWHEAIIPEDKWEKVQEM-YKSLNRKASNTKPTL---LSGLLKCKECGNNYI-RKRGGSY 280 Query: 326 HG--YYVCPMRRLH-----------RCDRPSIKRDLVDYNIINEL 357 YY C + L C +IK DL++ +I+ L Sbjct: 281 DKNLYYGCNLNNLRYSDKFFYKDIPECSSATIKGDLLEKAVIDTL 325 >UniRef50_C4ILC3 Resolvase n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4ILC3_CLOBU Length = 533 Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust. Identities = 117/546 (21%), Positives = 221/546 (40%), Gaps = 121/546 (22%) Query: 18 GDSLNRQRRLIAEWLK--VNSDYYLDTITYEDLGLSAFKGKHAQSGAFSEFLDAIEHGYI 75 G+S+ Q L + VNS L+ I YED G F GK+ EF I+ Sbjct: 17 GESIENQIELCKNYCNTYVNSGNNLEYIIYEDEG---FSGKNTNR---PEFQHMIDDIKK 70 Query: 76 LPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDSLNEPYSLIKAI 135 TL+ LDR+SR V + L+L+ + ++ I++ + D+ + P Sbjct: 71 KKIDTLICYRLDRISRN-VADFSSTLELLQKYNVNFISIKER----FDT-STPLGRAMIY 124 Query: 136 LIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS------LDDKRTAFV- 188 + + A E E + RV+ I A RWL + R ++ Sbjct: 125 IASVFAQLERETIAERVR------------DNMIQLAKSGRWLGGNIPYGFNIARKTYIS 172 Query: 189 -----------PDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVI 237 P+ ++T+ ++ ++ S+ + + LN +++ +G ++ + I Sbjct: 173 DFKEKEFSILSPNKKELETVNFVYSYYIKTHSIRQVTRLLNVNSIIGKNG--GSFDLAQI 230 Query: 238 EKLLAN----------------KALIGICVPS-------YRARGKGISEIAGYYPRVISD 274 ++L N K L P+ ++ K IS + + +S+ Sbjct: 231 RRMLRNPLYVISDDKSHEYLIKKGLNVFGSPNGNGYITYNKSNQKNISADSNQWIVAVSN 290 Query: 275 D--LFYAVQEIRLAPFGISNSSKNPML-----INLLRTVMKCEACGNTMIVHAVSGS--- 324 + + +++ +N SK P + +L ++KC+ CG+ MIV SG Sbjct: 291 HKGIITSDNWLKVQHQLDNNKSKMPRIGTGKNHSLFSGILKCKKCGSNMIV-KFSGKNKN 349 Query: 325 --LHGYYVCPMRR---LHRCDRPSIKRDLVDYNIINELLFNCSKI------QPVEN---- 369 + YYVC ++ L++C +I+ D +D + +L + ++N Sbjct: 350 NIPYEYYVCSGKQNKYLNKCTTKNIRVDKLDKILTRKLKIHDKTALMKTLRDSIDNICCD 409 Query: 370 -KKDANETLELKIIELQMKINNLIVALSVAPEVTA---IAEKIRLLDKELRRASVSLKTL 425 K + ++E +I E ++ ++NLI L+ + T + +I LLDK + R L+T+ Sbjct: 410 FKNNQISSIEYEIHENKVSMDNLIKQLTKSASSTVSDRLMNEINLLDKNIVRLKKHLETI 469 Query: 426 KSKG----------------VNSFSD-FYAIDLTSKNGRELCRTLAYKTFEKIIINTDNK 468 + + +NSFSD ID T++ R L +TL + + ++DN Sbjct: 470 ELEQSHDKKTNIDIKNIINVLNSFSDTIEYIDDTAQ-KRFLIQTL----IKSAVWDSDNN 524 Query: 469 TCDIYF 474 +I F Sbjct: 525 NVEIIF 530 >UniRef50_D0AKJ5 Resolvase n=9 Tax=Bacilli RepID=D0AKJ5_ENTFC Length = 545 Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust. Identities = 43/165 (26%), Positives = 71/165 (43%), Gaps = 20/165 (12%) Query: 187 FVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLANKAL 246 V +P+ K + LI+ + AIA +LN + K++A+ + ++ +L NK Sbjct: 179 LVIEPEEAKIVRLIYAKYLGGAGYRAIANFLNRQGYQTV--KKNAFSTTAVKDILRNKIY 236 Query: 247 IG-------ICVPSYRARGKGISEI--AGYYPRVISDDLFYAVQEIRLAPFGISNSSKNP 297 G I + R +GK I G + +IS++ + VQE R A G N Sbjct: 237 AGYLEYARYINWETKRRKGKNPKPILVKGTHEPIISEEDYQKVQE-RFALEG-KQPKWNH 294 Query: 298 MLINLLRTVMKCEACGNTMIVHAVSGSLHG-------YYVCPMRR 335 N+L +++C CG M V+ +L YY C + R Sbjct: 295 TGENVLTGLLRCPECGAPMAASNVTNTLKDGTKKRIRYYSCSVFR 339 >UniRef50_A5VJN5 Recombinase n=6 Tax=Lactobacillus reuteri RepID=A5VJN5_LACRD Length = 421 Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust. Identities = 82/348 (23%), Positives = 146/348 (41%), Gaps = 48/348 (13%) Query: 81 LLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDSLNEPYSLIKAIL--IA 138 +LV LDRLSR + + + I I+L +N + + KA++ ++ Sbjct: 16 VLVYKLDRLSRSQKDTLYLIEDVFQKNNIHFISLSEN-------FDTSTAFGKAMIGILS 68 Query: 139 QRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDKRTAFVPDPDRVKTIE 198 A E E R+ + R +SG IM + P + D V DP R + ++ Sbjct: 69 VFAQLEREQIKERMSMG----RVGRAKSGKIMEFNNPAFGYEVDGDNYKV-DPLRAEIVK 123 Query: 199 LIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLANKALIGICVPSYRARG 258 I+K+ + S+N I + LN ++ G + W + I +L+N +G R G Sbjct: 124 RIYKMYLSGTSINKIKETLN---LEGHIGNKKNWSDTRIRYILSNPTYLG----KIRYDG 176 Query: 259 KGISEIAGYYPRVISDDLFYAVQ----EIRLAPFGISNSSKNPMLIN-LLRTVMKCEACG 313 K G + +I ++ F Q E + A + N P +L +++C CG Sbjct: 177 KTYD---GKFSPIIDEETFNKTQNELKERQTATYKRFNMKLRPFQSKYMLSGLLRCGYCG 233 Query: 314 NTMIVHA--VSGSLHGYYVCP-------MRRLHRCDRPSIKRDLV-----DYNIINE--- 356 T+ V++ +G Y CP R ++ P+ LV + +INE Sbjct: 234 ATLFVNSYVYNGKRKLRYNCPSTYKSKQKTRTYKIMDPNCPFKLVYAKDLEPAVINEIKN 293 Query: 357 LLFNCSKIQ-PVENKKDAN-ETLELKIIELQMKINNLIVALSVAPEVT 402 L N IQ PV+ K D + E ++ ++ +++ + LI ++ +V Sbjct: 294 LALNPQSIQKPVKKKPDIDVEAIQKELAKVRKQQQRLIDLYVISDDVN 341 >UniRef50_C8W5L9 Recombinase n=2 Tax=Clostridiales RepID=C8W5L9_DESAS Length = 554 Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust. Identities = 82/373 (21%), Positives = 148/373 (39%), Gaps = 64/373 (17%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQ-RRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 +K I Y R S + G+S + Q +RL+ E K +D + I + L + G + Sbjct: 6 LKYTILYGRLSQEDERDGESNSIQNQRLMLE--KYATDNGFENILF--LSDDGYSGTNFN 61 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREK--VGEAIERLKLILNHGIDVITLCDN 117 A+ E ++ +E+ + T++V+ + RL R+ VG+ E + + G+ I + +N Sbjct: 62 RPAWKELMNLVENNEV---ATIIVKGMSRLGRDYLLVGQYTE--MIFPSCGVRFIAVSNN 116 Query: 118 TVYNIDSL--NEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCP 175 +DSL + ++ + A + S S VK E G + P Sbjct: 117 ----VDSLYGDNDFTPFVNLFNDFYAKDTSRKIRSVVK--------SKAERGERVATRAP 164 Query: 176 RWLSLDDK--RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFS------- 226 D+ ++ VPD D ++ IF L +E + IA LN V + Sbjct: 165 YGYKKDENNPKSKIVPDEDVTPIVQRIFSLCVEGKGPTQIANQLNKEQVYSPGYYYYIKT 224 Query: 227 ---------GKESAWGPSVIEKLLANKALIGICVP------SYRARGKGISEIAGYYPR- 270 + AW + I +L N+ +G + SY+ + K I + R Sbjct: 225 GIILTNVDVTRPYAWSSACIADILENEVYLGHTINLQYTTLSYKNK-KRIERPKSEHLRF 283 Query: 271 ------VISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVS-- 322 +I+ +++ VQ+IR +N + M L+R C CG M +H Sbjct: 284 ENTHEPLITKEIWDIVQDIREHKKRRTNMEEQDMFSGLVR----CIDCGEVMTLHRAHTI 339 Query: 323 GSLHGYYVCPMRR 335 ++ ++C R Sbjct: 340 AAVKNNFMCSTYR 352 >UniRef50_A5Z6W7 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5Z6W7_9FIRM Length = 549 Score = 44.7 bits (104), Expect = 0.009, Method: Compositional matrix adjust. Identities = 76/343 (22%), Positives = 136/343 (39%), Gaps = 53/343 (15%) Query: 7 YMRFS-SPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFSE 65 Y+R S + G S+ Q+ ++ ++L D+ + TY D G + G + F + Sbjct: 25 YIRLSVEDNKKRGCSVENQKLVLNDFLSDKPDFVVYD-TYIDNGAT---GTNFHRPGFQQ 80 Query: 66 FLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDSL 125 L IE G+I ++V+ L RL R + + H + I + D DS Sbjct: 81 MLSDIEAGHI---NCVIVKDLSRLGRNSIDTGYYIEQYFHAHNVRFIAVTDQ-FDTEDSG 136 Query: 126 NEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD-DKR 184 N L I++ + N +E + + K + + A++ G + A P D D Sbjct: 137 N----LHGGIMLPLK-NMINEAYALDIGRKIKAQARQAMKDGDYIGARAPYGYRKDPDNC 191 Query: 185 TAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAV------KNFSGK--------ES 230 + D + ++ IF+ E SLN I + LN+ + K +G+ Sbjct: 192 HKLLIDENTAPVVKQIFEWAHEHVSLNRIVRNLNEMGIPAPSHYKKDTGEITSPGLIGSG 251 Query: 231 AWGPSVIEKLLANKALIGICVPSYRARGKGISEIAGY----------------YPRVISD 274 W + K+L ++ G V +G ++I + + +IS Sbjct: 252 KWQTRTVMKILESEVYTGDLV-------QGKTKIVDHQQVKAGEDNLIIAKCTHEPIISY 304 Query: 275 DLFYAVQEIRLAPFGISNSS-KNPMLINLLRTVMKCEACGNTM 316 +LF AVQE R S ++ K P N+ + + C CG ++ Sbjct: 305 ELFNAVQEYRKQICEESKATPKRPYTPNIFKGKVFCADCGRSL 347 >UniRef50_B8I5Z6 Resolvase domain protein n=3 Tax=Clostridium RepID=B8I5Z6_CLOCE Length = 535 Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust. Identities = 58/257 (22%), Positives = 111/257 (43%), Gaps = 41/257 (15%) Query: 6 AYMRFSSPGQMSGDSLNRQRRLIAEWLKVNS----DYYLDTITYEDLGLSAFKGKHAQSG 61 Y+R S+ S+ Q++ I EW VN D+Y+D ++G Sbjct: 32 GYIRISTKKDSQITSIENQKKYIMEWASVNGYKIVDFYID----------------MKTG 75 Query: 62 AFS-------EFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITL 114 A+S + I G I ++ + + R SR+ + + IE + + N G I++ Sbjct: 76 AYSYLRQEMVRMKNDISSGKI---KGIVSKEISRTSRD-ILDIIELKRSLANQGAFFISI 131 Query: 115 CDNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASC 174 + Y+ + ++ + L+ +AQ+ E ++ SRVK++ K ++ + T + Sbjct: 132 KEG--YDSRTDDDEFLLVIHAGLAQK---ERKVTGSRVKITQMIKAKEG--KTNVPTPAL 184 Query: 175 PRWLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGP 234 LS D + + +P + +LI K +E I KYLN ++ G ++W Sbjct: 185 GYKLSPDGQH--IIINPATAEIYQLIVKKFLEGWGRLKICKYLNSQGIRTNRG-NASWST 241 Query: 235 SVIEKLLANKALIGICV 251 + I +L N +GI + Sbjct: 242 NSIYAILTNPVYLGITM 258 >UniRef50_A0PZI7 Site-specific recombinases, DNA invertase Pin-like protein n=6 Tax=Clostridium RepID=A0PZI7_CLONN Length = 554 Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust. Identities = 49/180 (27%), Positives = 73/180 (40%), Gaps = 39/180 (21%) Query: 197 IELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGP--SVIE------------KLLA 242 I+LIF L +E++ ++A YL H K +G E + G +IE K Sbjct: 188 IKLIFNLYLEKKGFPSVANYLCSHKYKGKNGGEFSQGTIKQIIENPVYTYADKKIYKYFK 247 Query: 243 NKALI---------GICVPSYRARGKGISEIA------GYYPRVISDDLFYAVQEIRLAP 287 NK I G+ + R +GK + I+ G + +IS D++ Q I Sbjct: 248 NKGAILCGNFDGKHGVITYNKREQGKKANPISEWIVSIGKHKGIISSDVWIKCQNIN--S 305 Query: 288 FGISNSSKNPMLIN--LLRTVMKCEACGNTMIV----HAVSGSLHGYYVCPM--RRLHRC 339 SS N LL ++ C CG+TM + SG YY C + R +RC Sbjct: 306 LNTKKSSPRSATGNKFLLSGLLVCNECGSTMGSWSRNNPKSGKYEKYYRCNLKNRASNRC 365 >UniRef50_UPI0001C355F0 cassette chromosome recombinase B n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C355F0 Length = 559 Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust. Identities = 83/371 (22%), Positives = 145/371 (39%), Gaps = 64/371 (17%) Query: 7 YMRFSSP--GQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFS 64 Y+R S G + DS+ Q+ L+ +++K D L I + D G + G F Sbjct: 27 YVRLSKEDNGYHTSDSIQMQQCLLEQYVKTQQDMKLVGI-FCDNGAT---GTDFDRPDFE 82 Query: 65 EFLDAIEHGYILPGTTLLVESLDRLSREKV--GEAIERLKLILNHGIDVITLCDNTVYNI 122 ++A+ I ++V+ L R R V G +E++ L + C +T+ Sbjct: 83 RMMEAVRRREI---DCIVVKDLSRFGRNYVETGYYLEKIFPFLGVRFVAVNDCYDTLKCA 139 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPR-WLSLD 181 D +E +K I+ + A + S K S L K+ E G + + P +L Sbjct: 140 DG-DEMVVSLKNIVNSLFAKDIS--KKSGTALRRKQ------EKGEFIGSWTPYGYLKSP 190 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHA------VKNFSGK------- 228 + + + DP+ + IF R+E + IAK LN+ V+ G+ Sbjct: 191 EDKNHLIIDPETAPIVRDIFTWRLEGLGYDEIAKRLNEQKILCPTMVRFLRGEFKKDSPR 250 Query: 229 --ESAWGPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPR---------------- 270 + W ++ + N G + A+GK I + PR Sbjct: 251 TVGTRWVAQTVKNITNNMVYAG-----HMAQGKQIRSLCEGIPRKEMERQDWIIVRNTHT 305 Query: 271 -VISDDLFYAVQEIRLAPFGISNSSKN--PMLINLLRTVMKCEACGNTMIVH---AVSGS 324 ++ +D + VQ I + N+ K P NLL ++ C+ CG TM + + G Sbjct: 306 PIVDEDTWNRVQRIN-SEAKTKNTEKRQLPKTENLLVGMVYCKDCGRTMGRYKNCSRKGH 364 Query: 325 LHGYYVCPMRR 335 + Y C +R+ Sbjct: 365 IRYTYCCRIRK 375 >UniRef50_A6P2A2 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P2A2_9BACE Length = 302 Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust. Identities = 60/243 (24%), Positives = 100/243 (41%), Gaps = 18/243 (7%) Query: 6 AYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFSE 65 AY R S+ + SL Q R A+ ++ ++ I E + S + K Q F + Sbjct: 25 AYCRVSTDHEEQNSSLEIQERYYAKLIEQTPNWINAGIFSEKV--SGLEVKKRQE--FQK 80 Query: 66 FLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDSL 125 L +G I +L +S+ R R + +++ L+ + GIDV +N + D + Sbjct: 81 LLRCCRNGTI---DLVLTKSVSRFGRNTL-DSLRALRELQILGIDVYFEKENLWLHDDQM 136 Query: 126 NEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDKRT 185 ++ A A ESE S ++ K + SG A + D Sbjct: 137 QVLMTVYFAF-----AQAESEGASQSIRWGIK----EGFRSGKSGYAEFVCFGYKQDGNG 187 Query: 186 AFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLANKA 245 D K + IFK+R +SL+AI+ +L + + + +GK W I KLL N+ Sbjct: 188 KLAIDEPDAKIVRKIFKMRASEKSLSAISDWLYEQGILSPTGK-CRWSRETISKLLKNEK 246 Query: 246 LIG 248 G Sbjct: 247 YTG 249 >UniRef50_C0ECX6 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0ECX6_9CLOT Length = 482 Score = 44.3 bits (103), Expect = 0.012, Method: Compositional matrix adjust. Identities = 114/511 (22%), Positives = 202/511 (39%), Gaps = 76/511 (14%) Query: 1 MKKAIAYMRFSSPGQM--SGDS--LNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGK 56 M+ A AY+R S+ Q+ S DS + +R A + + DY I ED G+S K K Sbjct: 9 MRVAAAYIRVSTDDQLEYSPDSQLIEIRRYAKAHDIVIPEDY----IYIEDDGISGRKTK 64 Query: 57 HAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCD 116 + AF + + P +L+ R +R + + + L GIDVI Sbjct: 65 KRE--AFQRMIGTAKTK-PKPFDVILLWKFSRFARNREDSVVYKSMLRKQLGIDVI---- 117 Query: 117 NTVYNIDSLNEPYSLIK-AILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCP 175 S++EP S K +ILI E S + + + + G S P Sbjct: 118 -------SVSEPLSDDKMSILIEAMIEAMDEYYSINLSEEVTRGMTEKVRRGE--PVSIP 168 Query: 176 RW-LSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGP 234 + S+ +K+ + P+P + +F+ +A LND +++ G + + Sbjct: 169 AFGYSIKEKQ--YYPNPKTAPIVRSLFEEYAAGAGCRDLATKLNDMGIRSTRG--NPFEN 224 Query: 235 SVIEKLLANKALIGICVPSYRARGK--------GISEIAGYYPRVISDDLFYAVQE---- 282 +E +L N IG+ + GK + + G + +++ +L+ VQ+ Sbjct: 225 RTVEYILRNPVYIGMI--RWSPEGKISRNYTKSNVMVVQGSHEPIVTRELWEQVQDRLDE 282 Query: 283 -IRLAP-FGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSL--HGYYVCPMRRLHR 338 R P + + ML L+R C CG+T+ VHA +GSL H Y + H Sbjct: 283 VKRTYPKYARVRERCDFMLKGLVR----CSNCGSTL-VHASTGSLQCHSYGRGSCKVSHS 337 Query: 339 CDRPSIKRDLVDYNIINELLFNCS----KIQPVENKKDANETLELKIIELQMKINNLIVA 394 P I + +++ E F ++P + D N ++ +I + K++ + A Sbjct: 338 ITLPKINKIVIES---IEATFRLGVFPLTVKPSKQSIDENALIQQQIQREKRKLDRIREA 394 Query: 395 ----LSVAPEVTAIAEKIRLLDKELRRASVS-------LKTLKSKGVNSFSDFYAIDLTS 443 + E A EKI L + E +A ++ K K NS ++ Sbjct: 395 YENEVDTLEEYKANKEKI-LTEIERLKAQLTPTPPVDLRKKFFEKNKNSVQKLKDPTISE 453 Query: 444 KNGRELCRTLAYKTFEKIIINTDNKTCDIYF 474 E+ R+ + I+ N T D+++ Sbjct: 454 SEKNEILRSFV----DHIVFNRAKGTVDVFY 480 >UniRef50_Q1B4B3 Recombinase n=8 Tax=Mycobacterium RepID=Q1B4B3_MYCSS Length = 460 Score = 44.3 bits (103), Expect = 0.012, Method: Compositional matrix adjust. Identities = 84/362 (23%), Positives = 134/362 (37%), Gaps = 57/362 (15%) Query: 4 AIAYMRFSS--PGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 A Y+R S+ GQ G + RQR + + + + Y D +SA G+ + Sbjct: 6 AAVYLRISADPTGQQLG--VARQRE---DCVALCESKGWQPVEYVDNDVSASSGR--RRP 58 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 A+ L I G I ++ LDRL R + +ER + D L TV Sbjct: 59 AYERMLTDIRDGKI---GAVVAWDLDRLHRRPI--ELERFMDL----ADAHRLALATVSG 109 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 L+ + A L A E + K R + ++K E G P+W Sbjct: 110 DVDLSTSQGKLVARLKGAVARHEVDHKRDRQLRAAQQK----AERGE------PQW---- 155 Query: 182 DKRTAF--------VPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWG 233 R AF VPDP ++ + + SLN I + ND +GK W Sbjct: 156 --RNAFGYLPDGSRVPDPTTAPLVKQAYAAVLAGASLNDICRLFNDAGAYGLNGK--PWT 211 Query: 234 PSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNS 293 +++ + L G+ + GKG +P ++ + L+ A Q + AP Sbjct: 212 ATLVSQFLRKPRNAGLRSHNGEIVGKGT------WPELVDESLWRAAQSVLDAPG--RAP 263 Query: 294 SKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNI 353 + + +LL V+ C CG+ + Y C C SI+ D V+ + Sbjct: 264 GRKTVRRHLLTGVLGCGKCGHYLSGMQTVDRKRITYAC-----KECRGVSIRADYVEPIV 318 Query: 354 IN 355 I Sbjct: 319 IG 320 >UniRef50_Q8LTD8 U153 integrase n=13 Tax=root RepID=Q8LTD8_9VIRU Length = 452 Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust. Identities = 69/317 (21%), Positives = 127/317 (40%), Gaps = 46/317 (14%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 KA Y+R S+ Q+ S+ Q + + D Y+ + G + A Sbjct: 2 KAAIYIRVSTQEQIENYSIQAQTEKLTALCRSK-----DWDVYDIFIDGGYSGSNMNRPA 56 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 +E L + ++V LDRLSR + + L + ++ ++L + + Sbjct: 57 LNEMLSKLH-----EIDAVVVYRLDRLSRSQRDTITLIEEYFLKNNVEFVSLSET----L 107 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 D+ + P+ +++ A E E R+ + + +E+G +T + R D Sbjct: 108 DT-SSPFGRAMIGILSVFAQLERETIRDRMVMG----KIXRIEAGLPLTTAKGRTFGYDV 162 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLND--HAVKNFSGKESAWGPSVIEKL 240 T + + K +++I+ + E +S+ + K L VK++S + W Sbjct: 163 IDTKLYINEEEAKQLQMIYDIFEEEKSITTLQKRLKKLGFKVKSYSSYNN-W-------- 213 Query: 241 LANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPML- 299 L N G + + KG+ E P +IS++ FY VQEI S KNP + Sbjct: 214 LTNDLYCGYVSYADKVHTKGVHE-----P-IISEEQFYRVQEI------FSRMGKNPNMN 261 Query: 300 ---INLLRTVMKCEACG 313 +LL ++ C CG Sbjct: 262 RDSASLLNNLVVCGKCG 278 >UniRef50_UPI0001C354FA phage site-specific recombinase n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C354FA Length = 463 Score = 43.9 bits (102), Expect = 0.015, Method: Compositional matrix adjust. Identities = 74/352 (21%), Positives = 140/352 (39%), Gaps = 67/352 (19%) Query: 7 YMRFSSPGQMS-GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFSE 65 Y+R SS Q GDS+ Q+ +++ + + L TY D G+S G+ F+ Sbjct: 14 YIRVSSDEQAERGDSIRDQKERGTKYIDDHQNMILQD-TYIDDGVS---GQKLDRDDFTR 69 Query: 66 FLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDSL 125 + ++ G + ++ LDR R L H ++ + D ++ Sbjct: 70 LIRNVKAGLV---DLIIFTKLDRWFRS------------LRHYLNTQVILDKYNVAWTAI 114 Query: 126 NEPY----SLIKAILIAQR---ANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWL 178 ++PY + +AQ A E++ RV ++ K +E G ++T PR Sbjct: 115 DQPYFDTSTPYGRAFVAQSMTWAELEAQNGGLRVADVFRSK----VEHGEVITGKVPRGY 170 Query: 179 SLDDKRTAFVPD-PDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVI 237 + +K F + P + +I+ + + L Y+ + N S + ++ Sbjct: 171 MIQNKHLVFSDEAPAMLDSIQYFHR----EQGLAKTVNYMRETHGINMSIQ------NLK 220 Query: 238 EKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNP 297 +L N+ G R RG Y PR+ISD+++ +Q + I +S K P Sbjct: 221 NSILRNEKYTG------RYRGN-----ENYCPRLISDEMYQDIQRVLDNNSTIRSSQKYP 269 Query: 298 MLINLLRTVMKCEACGNTM-------IVHAVSGSLHGY----YVCPMRRLHR 338 + + ++ C+ CG+ M + SG ++ Y Y C R ++ Sbjct: 270 YIFS---GILICDECGHKMSGCHINVVSRRTSGKVYRYKYPAYECLQYRAYK 318 >UniRef50_C0EZ44 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EZ44_9FIRM Length = 584 Score = 43.9 bits (102), Expect = 0.015, Method: Compositional matrix adjust. Identities = 83/374 (22%), Positives = 152/374 (40%), Gaps = 56/374 (14%) Query: 8 MRFSSPGQMSGDS-LNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFSEF 66 +R SS Q+ D L QR+L+ E++ + +++LD+ Y + S + + Sbjct: 11 LRVSSNQQLEEDGDLGIQRQLVKEFIAQHEEWHLDSKEYFEGSNSGYSNAVENRDILQQA 70 Query: 67 L-DAIEHGYILPGTTLLVESLDRLSRE--KVGEAIERLKLILNHGIDVITLCDNTVYNID 123 L DA + Y + L V DR+ R ++G + +LK ++G+D+ T+ D + Sbjct: 71 LRDAQRNEYDI----LAVYKDDRIGRRMWEIGAYVMQLK---SYGVDIYTVKDGCIS--- 120 Query: 124 SLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD-- 181 E ++ +++A R ++ SS + K Q ++ G + P L+ Sbjct: 121 --PESDDIMGQMMLALRYG-NAQKSSSDTGMRVKDTAQKLVQQGKFVGGKAPYGYKLELS 177 Query: 182 -------DKRTAFVPDPDRVKTIELIFKLRMERR-SLNAIAKYLN-DHAVKNFSGKESAW 232 V P+R K ++ I++L +++ + IA+ LN D K + E W Sbjct: 178 GEISKHGRALHHLVIIPERAKAVKHIYELSLDKEYGSSKIARELNLDEEYKELAPSE-VW 236 Query: 233 GPSVIEKLLANKALIGICVPSYRAR---GKG---------ISEIAGYYPRVISDDLFYAV 280 + +L N G R + GK +SE ++IS D + V Sbjct: 237 RGGTVTSILTNPIYAGYTAYKRREKKENGKSKRLDSSEWILSEEPNPEIQIISPDDWNLV 296 Query: 281 Q--------EIRLAPF--GISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYV 330 Q + R AP G+ ++N ++ L+ V+ C CG +GS + Y+ Sbjct: 297 QIKRKQRGMKYRTAPQNKGVKVIARNEGMLPLI-DVIYCGYCG----CKCTNGSRYNYWT 351 Query: 331 CPMRRLHRCDRPSI 344 R R +I Sbjct: 352 IKDTGERRASRQAI 365 >UniRef50_A5KS58 Recombinase n=2 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KS58_9BACT Length = 384 Score = 43.9 bits (102), Expect = 0.016, Method: Compositional matrix adjust. Identities = 46/191 (24%), Positives = 79/191 (41%), Gaps = 20/191 (10%) Query: 162 DALESGTIMTASCPRWLSLDDK-RTAFVPDPDRVKTIELIFKL-RMERRSLNAIAKYLND 219 + L G + + P + ++ + + VP+ D T++ +F++ + S+ + + + D Sbjct: 152 EKLAQGWLPASPPPGYKTVTEHGKKIHVPNMDVAPTMDRVFQVAELPDYSVKRVTEVMAD 211 Query: 220 HAVKNFSGKESAWGPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYA 279 + N GK + S + K+L N IGI R GK E G +IS +LFY Sbjct: 212 WGITNSKGK--PYSKSFVHKILTNPFYIGIN----RFNGK---EYPGAQEPIISKELFYR 262 Query: 280 VQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYY-----VCPMR 334 VQE P N + ++R C C + G +G C R Sbjct: 263 VQEKLRRPRRGRVKKHNSVFKGMIR----CVRCDAMVTWQKQKGRYYGVCQRKTDACRGR 318 Query: 335 RLHRCDRPSIK 345 R+ R DR ++ Sbjct: 319 RMLREDRLEVR 329 >UniRef50_C3Q415 Site-specific recombinase n=4 Tax=Bacteroides RepID=C3Q415_9BACE Length = 518 Score = 43.9 bits (102), Expect = 0.016, Method: Compositional matrix adjust. Identities = 98/420 (23%), Positives = 166/420 (39%), Gaps = 75/420 (17%) Query: 5 IAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITY-EDLGLSAFKGKHAQSGAF 63 I Y R SS Q G SL+ Q + ++ +D I Y ED F+ + G Sbjct: 6 IIYYRVSSNEQTLGASLDVQEERLRKYCNQMGYNIIDNIPYREDESAKTFEKRPVIQGIM 65 Query: 64 SEFLDAIEHGYILPGTT----LLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 + YI + LL DR SR+ + A E LK +L G++ + Sbjct: 66 N---------YIRKNKSRVNKLLFLQWDRYSRDIIS-ASENLKELLKSGVEPNAIEAPLD 115 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLS-----WKKKRQDALESGTIMTASC 174 +N D+ +L+ R N + K + + + W+K E+ I Sbjct: 116 FNSDTW--------PLLLEYRHNATTS-KGQKTQWTVFMEHWQK------ENVLIKHQEG 160 Query: 175 PRWLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLND--HAVKNFSGKESAW 232 + + + T D + I+ +FK +AK + + + F+ K Sbjct: 161 YKNVRISKHETHVEIDINTAPFIQAMFK---------EVAKDIETSCYIRRKFARKGYNI 211 Query: 233 GPSVIEKLLANKALIG-ICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGIS 291 S ++L NK IG I VP+Y+ G+ + G + +I ++ FY VQEI Sbjct: 212 PESSFLEMLRNKFYIGKIRVPAYK--GEPEYYVNGEHEAIIDEETFYKVQEILDG----- 264 Query: 292 NSSKNPML---INL---LRTVMKCEACGNTMIVHAVSGS--LHGYYVCPMRRLH-RCDRP 342 K P L INL LR + C CG + SG+ + YY C + H R Sbjct: 265 KRKKTPKLSKAINLDLYLRKFLICPVCGCALTGATSSGNGGKYTYYFCCNNQKHIRVRSE 324 Query: 343 SIKRDLVDY-----------NIINELLFNCSKIQPVENKKDANETLELKIIELQMKINNL 391 ++ + Y ++ NE+L + + E+KK+ L+ ++ +Q +IN++ Sbjct: 325 NVNEEFARYTAQLKPNKTVLDLYNEILKDLQSERKGESKKEV-AALQNELSTVQKRINSI 383 >UniRef50_C6JGM9 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGM9_9FIRM Length = 557 Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust. Identities = 82/385 (21%), Positives = 146/385 (37%), Gaps = 59/385 (15%) Query: 4 AIAYMRFS--SPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 A Y+R S + +S+ Q LI ++K SD + T++D G F G Sbjct: 20 AAKYLRLSIEDGDKAESESIVNQSILIDNYMKSTSDITI-VETFKDDG---FSGTDFNRP 75 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F L AIE+ I ++V+ L R RE + K+ G+ I + DN Y+ Sbjct: 76 GFQAMLKAIENKEI---NCIIVKDLSRFGREHIDVDRYIQKVFPQLGVRFIAINDN--YD 130 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 ++ N + + + + + S +V+ KR G ++ + D Sbjct: 131 SETANITDTHLVLPVKSFVNDTYCRQNSQKVRSHLSAKRNIGEYVGNYVSYGYKK---CD 187 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAV-----------KNFSGK-- 228 ++ DP K + IF +ME S IA LN+ V NF Sbjct: 188 TDKSQIEIDPVAAKHVRDIFTWKMEGMSNQLIADKLNELGVLAPADYKRATGVNFKSSFQ 247 Query: 229 ---ESAWGPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPR------------VIS 273 S W I ++L N G+ R ++ P+ +++ Sbjct: 248 THLTSRWSAVAIIRILKNPIYYGVLQQGKSQRINYKVKVQRALPKEEWVIFENHHEGIVT 307 Query: 274 DDLFYAVQ-----EIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMI--VHAVSGSLH 326 + + VQ + R+AP +N + L ++ C CG+ +I ++ G Sbjct: 308 KEEYETVQMLLAKDTRIAP------GENRLY--LFGGLLSCGDCGSNLIRRTNSYKGEKT 359 Query: 327 GYYVCPM--RRLHRCDRPSIKRDLV 349 +Y+C ++ +C R SI+ D++ Sbjct: 360 VFYICSSYNKKKDQCSRHSIREDVL 384 >UniRef50_A7GPE0 Resolvase domain n=4 Tax=Bacillus cereus group RepID=A7GPE0_BACCN Length = 491 Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust. Identities = 81/378 (21%), Positives = 151/378 (39%), Gaps = 64/378 (16%) Query: 80 TLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDSLNEPYSLIKAILIAQ 139 LLV +DR+SR+ A E K+++ H I ++T P AI ++Q Sbjct: 70 ALLVMDIDRISRDN-AHAEEIKKMLIIHDIKILT--------------PQG---AIDLSQ 111 Query: 140 RANEE-SEIKSSRVKLSWKKKRQDALESGTIMTASCPRWL----------SLDDKRTAFV 188 +NE ++ +K+ R+ L G + A +W ++KR V Sbjct: 112 ESNEMLFSFQAMMANFEYKQIRK-RLGRGRLAAAEQGKWTMSNRVPLGYKKNEEKRLEVV 170 Query: 189 PDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLANKALIG 248 + K I IF+ +ER S N IAK L+ ++ GK + I + N G Sbjct: 171 EEE--AKIIRFIFQKTLERVSANEIAKQLDILGWRSRQGK--VLTSAHISNMRRNVVYYG 226 Query: 249 ICVPSYRARGKGISE--IAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTV 306 + + G+ + + + + ++S +F+ VQ+I L N + L+ + Sbjct: 227 VVKACRKVNGRVVDKVFVENAHEPIVSKQIFFEVQKI-LEENSTGNFFNKRKVTRKLQNL 285 Query: 307 MKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINELLFNCSKIQP 366 + C CG + + C +++ D + Y I + + +Q Sbjct: 286 IYCNCCGRKRYIQFDGNGVDYIKSC----IYKVDNNKCRDRGYKYEPIEQFV-----LQK 336 Query: 367 VENKK-DANETLE----LKIIELQMKINNLIVALSVAPEVTAIAEKIRLLDKELRRASVS 421 V+ KK D + L+ L IE++ K+ I S+ ++T ++ R + Sbjct: 337 VKEKKPDFEQELQMLKSLDTIEIEKKL--FIQRESLEKQITRFNKRQR-----------N 383 Query: 422 LKTLKSKGVNSFSDFYAI 439 LK ++ G + S+FY + Sbjct: 384 LKEMRMDGEITKSEFYEM 401 >UniRef50_B8J6W1 Resolvase domain protein n=2 Tax=Anaeromyxobacter dehalogenans RepID=B8J6W1_ANAD2 Length = 341 Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust. Identities = 58/235 (24%), Positives = 94/235 (40%), Gaps = 24/235 (10%) Query: 83 VESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDSLNEPYSLIKAILIAQRAN 142 V LDRL+R + E + I+ VI D S+ +P ++ IL RA Sbjct: 85 VRHLDRLTRHADPDEQEAVFGIIRRAHAVIVEADG------SITDPRTMTGRILAIVRAE 138 Query: 143 EESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDKRTAFVPDPDRVKTIELIFK 202 +E + V+ + KR+ A E I+ P + DK + DP+R + IF+ Sbjct: 139 GAAEERRKIVERTVAGKRRAAQEGRLII--GFPPYGRRFDKMHGWTLDPERAEVYRSIFE 196 Query: 203 LRMERRSLNAIAKYLNDHAVKNFSGK-ESAWGPSVIEKLLANKALIGICVPSYRARGKGI 261 + + SL IA+ LN + + G+ + W + L+ + +G Y G Sbjct: 197 MCLAGMSLREIAEVLNAKGIPSPLGRGDRRWLKRTVAHLIHSPGAVG----RYTTYG--- 249 Query: 262 SEIAGYYPRVISDDLFYAVQEIRLAPFGISN--SSKNPMLINLLRTVMKCEACGN 314 A I D + Q +A ++N S P + LLR + C CG Sbjct: 250 ---ATTQLEPIVDQV---TQRRAIAQLTLNNKLSGPRPKVFTLLRKLASCGECGR 298 >UniRef50_A7HAK1 Recombinase n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HAK1_ANADF Length = 414 Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust. Identities = 63/273 (23%), Positives = 111/273 (40%), Gaps = 63/273 (23%) Query: 197 IELIFKLRMERRSLNAIAKYLN--------DHAVKNFSGKESAWGPSVIEKLLANKALIG 248 + IF+L E L I LN D A + G+ WGP I +L N+ IG Sbjct: 71 VRRIFQLYAESHGLKQITSLLNEEGVPAPYDDAYRKQGGR--GWGPGTIRFMLKNERYIG 128 Query: 249 ICV---------P-----SYRARGKG------ISEIAGYYPRVISDDLFYAVQ----EIR 284 V P +YR RG+ S +A ++S +L+ VQ E + Sbjct: 129 RSVWKERMWVTDPATGARTYRMRGEDECVTTEQSHLA-----IVSKELWDRVQARFAERK 183 Query: 285 LAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAV---SGSLHGYYVCPM-------- 333 +A S N L+ L ++C CG+TM V +V +G + + C Sbjct: 184 VAKGRARGSGSNGHLLTGL---LRCGECGSTMRVVSVKWKAGRAYANFGCSAPHRKGAAI 240 Query: 334 ---------RRLHRCDRPSIKRDLVDYNIINELLFNCSK-IQPVENKKDANETLELKIIE 383 R+L+R +++ L I + +K +Q + A+ LE ++ Sbjct: 241 CGNGLVISERKLNRAVIEELRKLLASKEIQTRFVDGFTKRLQHKSPRTIASAALEAEVKA 300 Query: 384 LQMKINNLIVALSVAPEVTAIAEKIRLLDKELR 416 + ++ N+ A++ + A+AE++ L ++ +R Sbjct: 301 QEARVRNVTAAIARSGFSEALAEQLGLEEETMR 333 >UniRef50_A7GVM1 Resolvase domain n=1 Tax=Bacillus cytotoxicus NVH 391-98 RepID=A7GVM1_BACCN Length = 521 Score = 43.5 bits (101), Expect = 0.020, Method: Compositional matrix adjust. Identities = 95/408 (23%), Positives = 167/408 (40%), Gaps = 88/408 (21%) Query: 1 MKKAIA-YMRFSSPGQMS-GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLS--AFKGK 56 MK +A Y+R S+ Q + G S++ Q + +++ ++ Y D G+S + G+ Sbjct: 1 MKTKVALYVRVSTEEQANNGYSIDAQLNTLRNHCEISGKTIVEE--YADKGISGTSISGR 58 Query: 57 H--------AQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLI--LN 106 H A+ G FSE ++V + RL+R I+ LK++ LN Sbjct: 59 HGLQKMLEDAKKGLFSE---------------VIVWKISRLARN----TIDILKIVEELN 99 Query: 107 HGIDVITLCDNTVYNIDSLN----EPYSLIKAILIAQRANEESEIKSSRVKLSWKKK-RQ 161 +N V+ S N P ++ A E VKL ++ ++ Sbjct: 100 K--------NNVVFRSFSENFETETPMGKFALQMMGAVAELERNTIVDNVKLGMTQRAKE 151 Query: 162 DALESGTIMTASCPRWLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHA 221 G+++ +C DK V + K + IF L + + AIA LN Sbjct: 152 GKWNGGSMLGYTCI------DKELKIVEE--EAKIVRYIFDLYINGKGYKAIANKLNHEG 203 Query: 222 VKNFSGKESAWGPSVIEKLLANKALIGIC----VPSY-RARGKGISE----IAGYYPRVI 272 K + ++ ++ + I ++AN A G V ++ + R KG SE + G + +I Sbjct: 204 YK--TKRKKSFSINSIRTIIANPAYAGFIRFNQVENWSKKRRKGKSENTTTVKGTHEPII 261 Query: 273 SDDLFYAVQEIRLAPFGISNSSKNPMLINL-----LRTVMKCEACGNTMIVHAVSGSLHG 327 S D++ + R+ ISN + L T+++C CG MI H + + +G Sbjct: 262 SLDVW---ETSRI----ISNQKSHKPAKTFSGTFPLTTLLRCPMCGQGMIGHKIKKNKNG 314 Query: 328 -----YYVCPMRRLHRCDRPSIKRDLVDYNIINELLFNCSKIQPVENK 370 YY C H K +L++ +I E +F KI+ + +K Sbjct: 315 TEYIRYYQCG--NFHYKGSAVCKSNLINADIAEEYVF--KKIEEITSK 358 >UniRef50_C2KNU8 Site-specific recombinase n=2 Tax=Actinomycetales RepID=C2KNU8_9ACTO Length = 523 Score = 43.5 bits (101), Expect = 0.020, Method: Compositional matrix adjust. Identities = 86/394 (21%), Positives = 153/394 (38%), Gaps = 79/394 (20%) Query: 45 YEDLGLSAFKGKHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLI 104 Y D G+S KH + F +D G I +L +S+ R +R V +++ ++ + Sbjct: 69 YCDEGISGTSMKHRE--GFQTMIDDALAGKI---DLILTKSVSRFARNTV-DSLTTVRKL 122 Query: 105 LNHGIDVITLCDNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDAL 164 + G++V +N +Y D+ E I + L A EES S V +K+ D Sbjct: 123 KDAGVEVYFQKEN-IYTFDTKGELLITIMSSL----AQEESRSISENVTWGHRKRFAD-- 175 Query: 165 ESGTIMTASCPRWLSLDDKRTA---FVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHA 221 G IM P L K+ A V D + T+ LI++L ++ +++ I L Sbjct: 176 --GKIM---VPYASLLGYKKGADGSLVIDETQAPTVRLIYQLFLDGMAISEIKTELAARK 230 Query: 222 VKNFSGKESAWGPSVIEKLLANKALIG------ICVPSYRARGKGISE-------IAGYY 268 + GKE W S + +L+N+ G + + ++E + G + Sbjct: 231 ILTPRGKE-VWSTSTVRSILSNEKYKGDALLQKTFTTDFLTKKMKVNEGEVPQYYVTGNH 289 Query: 269 PRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACG----------NTMIV 318 +I+ ++ VQ G +S+K + L T +KC CG NT Sbjct: 290 EPIIAPHIWDQVQYELSTRHGNISSAK----VGLFSTRLKCFQCGAWYGRKTWASNTKYK 345 Query: 319 HAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINEL-------------------LF 359 + V H Y H C ++K + + + + L +F Sbjct: 346 YTVWQCNHKY-----AGQHPCSSATVKDEQIKDSFVQALNQLIARHRYESHLPQVLGDMF 400 Query: 360 NCSKIQPVENKKDANETLELKIIELQMKINNLIV 393 + S+++ + + KI+EL +I LI Sbjct: 401 DTSRLE------EQAAACQAKIVELTEQIEALIA 428 >UniRef50_B6FLM9 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLM9_9CLOT Length = 569 Score = 43.5 bits (101), Expect = 0.021, Method: Compositional matrix adjust. Identities = 55/279 (19%), Positives = 99/279 (35%), Gaps = 51/279 (18%) Query: 164 LESGTIMTASCPRWLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVK 223 +E GT + P ++ T V D + + + L+F+ ++E S+ I L+ Sbjct: 175 MEQGTFQKRNLPYGYRWNEDHTNMVIDEETAQYVRLMFQWKIEGWSIPTILNELDRLGAP 234 Query: 224 NFSGKE-------------SAWGPSVIEKLLANKALIGICV--PSYRARGKGISE----- 263 N ++ W S + +L+N +G V S +A KGI Sbjct: 235 NTELRKRQNGTRKGDGCSCKGWYSSTLYGILSNPQYVGDTVLGRSMKAIYKGIKSHNVKD 294 Query: 264 ------IAGYYPRVISDDLFYAVQEIRLAPFGISNSSKN------PMLINLLRTVMKCEA 311 + +IS + F VQ+I A +S L+NL + C Sbjct: 295 KDKWIVFPNTHEALISREDFQKVQDILQAASEARQTSMQKTEEIRATLVNLFEGKIVCAD 354 Query: 312 CGNTMIVHA------VSGSLHGYYVCPM---RRLHRCDRPSIKRDLVDYNIINELLFNCS 362 CG M H + YY C RR C ++D ++ N++ + Sbjct: 355 CGKKMYFHRKRIDKDKRKRWYAYYECSTSVGRRYEHCTSHYTRQDTLEANVLAAIQLQVE 414 Query: 363 ----------KIQPVENKKDANETLELKIIELQMKINNL 391 K++ E +K+ + I L +++N + Sbjct: 415 AALDYDKLLDKLRGSEGEKNIRDQQNALITSLNLRLNGV 453 >UniRef50_C6LJI9 Site-specific recombinase, resolvase family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LJI9_9FIRM Length = 506 Score = 43.5 bits (101), Expect = 0.021, Method: Compositional matrix adjust. Identities = 91/426 (21%), Positives = 171/426 (40%), Gaps = 70/426 (16%) Query: 41 DTITYEDLGLSAFKGKHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIER 100 D TY D G F GK+ AF + + I G I ++V LDR+SR + + Sbjct: 37 DYETYIDKG---FSGKNTNRPAFMQMMQDIRAGKI---KRVIVYKLDRISRS-ILDFSNM 89 Query: 101 LKLILNHGIDVITLCDNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKR 160 +++ H ++ ++ + + N ++ +I+ AQ E E RV ++ K Sbjct: 90 MEIFQEHHVEFVSSTEKFDTSTPIGNAMLNI--SIVFAQL---ERETIQKRVADAYYTKS 144 Query: 161 QDALESGTIMTASCPRWLSLDD------KRTAFVPDPDRVKTIELIFKLRMERR-SLNAI 213 Q G M P L+D + FVP+P ++ I+LI++L E+ +L A+ Sbjct: 145 Q----KGYYMGGRVPYGFQLEDAIINGIHTSRFVPEPMEMEQIKLIYRLYSEQDMTLGAV 200 Query: 214 AKYLNDHAVKNFSGKESAWGPSVIEKLLANKALIGICVPSY---RARGKGISEIAGYYPR 270 + L + G +AW + I +++ N + + Y ++G + Y Sbjct: 201 MRELLNRGFTEKRG--AAWCTARISEIVRNPVYVKADIDVYNFFESQGSNLVNPVSDYIG 258 Query: 271 VISDDLFYAV--------------QEIRLAPF-GISNSS-----------------KNPM 298 L+ +++ LAP G+ +S+ N Sbjct: 259 TNGIFLYKGCNGDKKKKKQYDLVDRDVVLAPHEGVIDSATWLKCRLKIMNNRQSARTNKG 318 Query: 299 LINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLH-RCDRP--SIKRDLVDYNIIN 355 L +KC+ CG V + Y+ C R +C +I D+ + I Sbjct: 319 KRTWLSGKVKCKKCGYAYTVTKSNTKAGRYFQCSGARYSIKCKGSGHTIYADVFEDYIFG 378 Query: 356 ELLFNCSKIQPV-----ENKKDANETLELKIIELQMKINNLIVALSVAPE--VTAIAEKI 408 E+ +K Q + E ++ +++I E+ +I++L++ +S A + + I ++I Sbjct: 379 EIRKELAKFQYLSEELTETVSQSDNQNKIRIAEIDKEISSLLLKVSDANKTLMNYINKRI 438 Query: 409 RLLDKE 414 LDKE Sbjct: 439 EELDKE 444 >UniRef50_Q3SMV6 Resolvase n=4 Tax=Rhizobiales RepID=Q3SMV6_NITWN Length = 561 Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust. Identities = 83/359 (23%), Positives = 147/359 (40%), Gaps = 51/359 (14%) Query: 1 MKKAIAYMRFSSPGQMSGD-SLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 M +A YMR S+ Q D S+ QR + W + + Y + + G SA + Sbjct: 22 MHRAALYMRVSTGRQAEHDLSIPDQRHQLQSWCRAHG--YEPAAEFVEAGASATDDRRP- 78 Query: 60 SGAFSEFLDAI---EHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCD 116 F + ++ E+ + ++V S R RE + L+ + H + V+++ Sbjct: 79 --IFQQMIERACDGENAF----DVIIVHSYSRFFREAFEQEFY-LRKLARHKVRVVSITQ 131 Query: 117 NTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPR 176 + NEP + +IA +S + V S K+ + +G TA Sbjct: 132 P----VGDENEPVHAMMRKVIALFDEYQSRENAKHVIRSMKENARQGFWNGA--TAPLGY 185 Query: 177 WLSLDDKRTAFVP---DPDRVKT--IELIFKLRM------ERRSLNAIAKYLNDHAVKNF 225 L +KR + D D V+ + LI+KL + + + K+LN + + Sbjct: 186 KLVEAEKRGTKIKKKLDVDAVEAEYVRLIYKLYLYGDGTSGALGIKEVVKWLNRNGYRTR 245 Query: 226 SGKESAWGPSVIEKLLANKALIG---ICVPSYRARGKG----ISEIAGYYPRVISDDLFY 278 G+ +G + + K+L N IG V S R R + I +IA P +I +F Sbjct: 246 RGQ--TFGVAGVHKVLTNTVYIGEWQFNVTSSRTRQRKPDTEIVKIA--VPAIIEPHVFE 301 Query: 279 AVQ-EIRL-APFGISNS-SKNPMLINLLRTVMKCEACGNTMIVH---AVSGSLHGYYVC 331 VQ ++R +P ++ + P+L+ L C C M + + +G++H YY C Sbjct: 302 QVQAQLRARSPRVVAPRLTTGPILLTGLAV---CATCAGAMTLRTGTSSTGAVHRYYTC 357 >UniRef50_A3J612 Site-specific recombinase n=2 Tax=Flavobacteria bacterium BAL38 RepID=A3J612_9FLAO Length = 528 Score = 43.1 bits (100), Expect = 0.027, Method: Compositional matrix adjust. Identities = 113/487 (23%), Positives = 200/487 (41%), Gaps = 101/487 (20%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 MKKA+ R SS Q G SL Q + ++ N I+ + K+ Sbjct: 1 MKKAVIMCRVSSDEQAKGYSLGVQLEQLTKYCDRND------ISIVKQYMEDHSAKNFNR 54 Query: 61 GAFSEFLDAIEH--GYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNT 118 F FL ++ G + LL+ S DR SR + +++ L + G+ V + Sbjct: 55 PEFQNFLQYVKRNKGEV---NLLLITSWDRFSRN-LSDSLVMLSTLEKLGVKVQAIEQP- 109 Query: 119 VYNID-SLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRW 177 ID S+ E +++ L+ EI + R + K + +L++G RW Sbjct: 110 ---IDLSIPENKAMLALYLVI------PEIDNDRRSIKIKGGVRGSLKAG--------RW 152 Query: 178 L---------SLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGK 228 + D K + ++ K ++ +F+ AI K L K + K Sbjct: 153 CRQAPLGYKNTRDPKNKPIIIPSEKAKYVKYMFEQI-------AIGK-LQSEIRKEVTKK 204 Query: 229 ESAWGPSVIEKLLANKALIG-ICVPSYRARGKGISEIAGYYPRVISDDLFYAVQE----- 282 S KLL N +G I VP ++ + + I G + +IS+ LF+ VQ+ Sbjct: 205 GFIISRSNFSKLLRNPIYVGKIIVP--KSEDEPMMIIEGIHEAIISEKLFFEVQQMLTDN 262 Query: 283 --IRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMI---VHAVSGSLHGYYVCPMRRLH 337 IR P S + + P LR ++ C CG + + +G+ + YY C + Sbjct: 263 NKIRKLPVYKSLNEELP-----LRGLLSCSNCGEKLTGSGSRSATGNRYFYYHC-----N 312 Query: 338 RCDRPSIKRDLV---------DYNIINEL----------LFNC----SKIQPVENKKDAN 374 C + +DLV D++ +E+ L NC SK+Q +E K++ Sbjct: 313 YCAKERYSKDLVNETFESILDDFSFTSEVKVIYQLMVKDLLNCDAKDSKLQ-LEKLKNSI 371 Query: 375 ETLELKIIELQ-MKINNLIVALSVAPEVTAIAEKIRLLDKELRRA----SVSLKTLKSKG 429 ++I +LQ + ++ I + + +T + + +LL +E+ R S +K LK+ G Sbjct: 372 AETNVRIEKLQDLLVDGKIDSNQYSETMTRYSNQKQLLVEEIERLKKVDSDYIKWLKN-G 430 Query: 430 VNSFSDF 436 V++ S+ Sbjct: 431 VDALSNL 437 >UniRef50_B7IUF9 Recombinase n=9 Tax=Bacillus cereus group RepID=B7IUF9_BACC2 Length = 515 Score = 43.1 bits (100), Expect = 0.028, Method: Compositional matrix adjust. Identities = 61/260 (23%), Positives = 102/260 (39%), Gaps = 40/260 (15%) Query: 81 LLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI-DSLNEPYSLIKAILIAQ 139 +L +DRL R + E L+ ++T Y++ D +E YS +A + Sbjct: 77 VLCMDMDRLGRGGMKEQGIILETFKRSNTKIMT--PRKTYDLNDEWDEEYSEFEAFM--- 131 Query: 140 RANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS---LDDKRTAFVPDPDRVKT 196 A +E +I + R++ + R ++E+G + P L+ + + + Sbjct: 132 -ARKELKIITRRMQ----RGRVASVEAGNYLGTHAPFGYDIHRLNKRERTLTINSEEASV 186 Query: 197 IELIFKLRM-ERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLANKALIGICVPSYR 255 + +IF E NAI LND K+ G E W P I +L N IG R Sbjct: 187 VRMIFDWYANEDMGANAIRSKLNDLGYKSKLGNE--WNPYSILDILKNNVYIGKVTWQKR 244 Query: 256 ARGKGISEIA---------------GYYPRVISDDLFYAVQEIRLAPFGI---SNSSKNP 297 K + G + +I + LF VQE + + + +N KNP Sbjct: 245 KEVKQPDAVKRSCARQDKSDWIIADGKHEPIIPESLFEQVQEKLNSRYHVPYNTNGIKNP 304 Query: 298 MLINLLRTVMKCEACGNTMI 317 L ++KC CG +M+ Sbjct: 305 -----LAGIIKCSKCGYSMV 319 >UniRef50_A1VBU1 Resolvase, N-terminal domain n=1 Tax=Desulfovibrio vulgaris DP4 RepID=A1VBU1_DESVV Length = 511 Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust. Identities = 88/400 (22%), Positives = 160/400 (40%), Gaps = 76/400 (19%) Query: 45 YEDLGLSAFKGKHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLI 104 Y+D G F G + + A LD + G I ++V +DRLSR + RL + Sbjct: 52 YDDGG---FTGGNLERPALKRLLDDVAEGRI---DCVVVYKVDRLSRSLLD--FSRLMDV 103 Query: 105 LN-HGIDVITLCD--NTVYNIDSLNE----PYSLIKAILIAQRANEESEIKSSRVKLSWK 157 + H + +++ NT +++ L ++ + +I +R ++ + ++R K W Sbjct: 104 FDKHKVSFVSVTQQFNTTHSMGRLTLNILLSFAQFEREIIVERTKDK--VYAARRKGKW- 160 Query: 158 KKRQDALESGTIMTASCPRWLSLD--DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAK 215 T P L D + + + + + + IF++ ++++SL A K Sbjct: 161 -------------TGGMPV-LGYDVAPEGGRLLVNEEEAEQVRGIFQIYLDKQSLIATIK 206 Query: 216 YLNDHAV-----KNFSGKE---SAWGPSVIEKLLANKALIGICVPSYRARGKGISEIAGY 267 L D K SG E A+ + + +LL N G V + G Sbjct: 207 ELEDRGWATKRWKTRSGHERGGKAFKLNSLHRLLTNPIFTGQVVFQG-------AVYEGE 259 Query: 268 YPRVISDDLFYAVQEIRLAPFGISNSSKNPMLIN----LLRTVMKCEACGNTMIVHAVS- 322 + ++ + + A Q F + P+ N LLR ++ C ACG MI H S Sbjct: 260 HKPIVDLNTWQATQRTLHGNF-----RRGPLGSNRYGALLRGLLYCSACGTAMI-HTCSK 313 Query: 323 --GSLHGYYVC---PMRRLHRCDRPSIKRDLVDYNIINELL---FNCSKIQPVENKKDAN 374 + YYVC R H+C S+ ++ ++ + N + I V NK A Sbjct: 314 RDTKTYRYYVCLTAQQRGWHQCPSKSLNAHDIETAVVEHIKGIGLNPAIISAVTNK--AT 371 Query: 375 ETLELKIIELQMKINNLIVALSVAPEVTAIAEKIRLLDKE 414 E + I+ L+ + L+ E+ + +IR L ++ Sbjct: 372 EKAQRNIMALEAE------HLACEREIKKLTNEIRKLTEQ 405 >UniRef50_B0N9Y5 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0N9Y5_EUBSP Length = 308 Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust. Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 19/205 (9%) Query: 81 LLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDSLNEPYSLIKAILIAQR 140 + +S+ R R+ V E +E L + + G+ VI + +D+ N L+ +I I Sbjct: 91 IFTKSISRFGRDTV-ETMEALSKLKSAGVRVIFEQEE----LDTANTDSDLMISI-IESF 144 Query: 141 ANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDKRTAFVPDPDRVKTIELI 200 A E+E +S +K W K+ A + + C + +D + + D + + +++I Sbjct: 145 AQAENESRSENIK--WGIKQGAASGTSKLYDRKCYGYKHNEDGK--LIIDEETAENVKII 200 Query: 201 FKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLANKALIGICVPSYRARGKG 260 F L + +S+ I K L + + +GKE W I+ +L+N+ G R G Sbjct: 201 FDLYLRGQSVLGIIKELEKRKIPSPTGKEK-WCKRTIDVMLSNEKYTG----DVRLLKTG 255 Query: 261 ISEI----AGYYPRVISDDLFYAVQ 281 S++ P +IS ++F AVQ Sbjct: 256 KSKVHYLATDNNPAIISKEVFEAVQ 280 >UniRef50_C6GWI2 Site-specific recombinase n=1 Tax=Streptococcus suis BM407 RepID=C6GWI2_STRS4 Length = 482 Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust. Identities = 84/402 (20%), Positives = 152/402 (37%), Gaps = 68/402 (16%) Query: 1 MKKAIAYMRFSSPGQMS--GDSLNRQRRLIAEWLKVNSDYY-LDTITYEDLGLSAFKGKH 57 M K Y+R S + +S+ QR L+ ++L +++ I + D G F GK+ Sbjct: 1 MPKIALYLRLSVDEATADESNSITNQRILLNQYLDRTPEFHPFKRIEFIDDG---FSGKN 57 Query: 58 AQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSRE--KVGEAIERLKLIL-------NHG 108 AF+ + + G I ++V+ R R+ + G IE + L N Sbjct: 58 PNRPAFNRLMSDVRVGKI---RYIIVKDFSRFMRDYLEFGNYIENIFPFLGVRFIAVNDQ 114 Query: 109 IDVITLCDNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGT 168 D T +N V ++ P+ + A+ +E+ +KS+ + SG Sbjct: 115 FDSFTSENNGV----EIDVPFRNLLNDFYARDVSEK--VKSAMNTMK---------RSGK 159 Query: 169 IMTASCP-RWLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLND-------- 219 M+ P +L + R + D ++ IF+L +E L+ IA LND Sbjct: 160 NMSWLPPFGYLKDPNDRFKIIIDESVAPVVKRIFQLCIEGVGLSRIAIILNDENTITPAE 219 Query: 220 ------------HAVKNFSGKESAWGPSVIEKLLANKALIGICVPSYRA--RGKGI---- 261 V K + W S + ++L N+A G + + + GK + Sbjct: 220 RKRQISQADYQYQIVVTEKQKRNIWTRSTVSRILKNEAYKGTYLFNAKTIFNGKQVKRPK 279 Query: 262 ---SEIAGYYPRVISDDLFYAVQEI---RLAPFGISNSSKNPMLINLLRTVMKCEACGNT 315 I + +++ ++F Q+ R S+K +I L M CE CG+ Sbjct: 280 EEWERIENNHESIVTSEIFEQAQKALKSRNNRHSYQQSTKKYDVI--LTGFMICEHCGHK 337 Query: 316 MIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINEL 357 + + H Y+ C ++ + D V+ I+ L Sbjct: 338 LTAYTYKKKTHHYFYCRYCKVQGISLKGCRSDRVEQKILEYL 379 >UniRef50_A6NXM2 Putative uncharacterized protein n=4 Tax=Bacteria RepID=A6NXM2_9BACE Length = 544 Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust. Identities = 82/368 (22%), Positives = 149/368 (40%), Gaps = 64/368 (17%) Query: 15 QMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFSEFLDAIEHGY 74 ++ +S+ QR + +++ + D L + D G S Q F + +AI G Sbjct: 21 KVESNSIASQRAICEDYIARHEDLELVCEPFVDDGYSGVSFNRPQ---FKKLEEAIRKGA 77 Query: 75 ILPGTTLLVESLDRLSREKV--GEAIERLKLILNHGIDVITLCDNTVYNIDSLN-EPYSL 131 + ++V+ L R SR + G IE K+ GI I + N Y DSL +P S Sbjct: 78 L---DCIVVKDLSRFSRNYIDGGRYIE--KIFPQLGIRFIAI--NDAY--DSLTGDPQSD 128 Query: 132 IKAILIAQRANEE-SEIKSSRVKLSWKKKRQDALESGTIMTASCPR-WLSLDDKRTAFVP 189 I N+ + S +++ S + K++ SG + + P ++ + + + Sbjct: 129 SFVIPFKNLINDSYCKDISMKIRSSLEVKQK----SGEFVGSFAPYGYMKSPENKNQLIV 184 Query: 190 DPDRVKTIELIFKLRMERRSLNAIAKYLNDHAV------KNFSG----------KESAWG 233 D + +++IF + + S+ IAK LN V K+F+G + W Sbjct: 185 DEAVSEYVQMIFSMYKDGFSIGRIAKRLNQMGVLSPMEYKHFAGVKFDTVFKTCDTAKWT 244 Query: 234 PSVIEKLLANKALIGIC------VPSYRAR---GKGISE---IAGYYPRVISDDLFYAVQ 281 ++++L N+ IG+ P+Y+ R K SE + + ++S + F AV+ Sbjct: 245 YKAVQRILTNEVYIGVLAQGKRGTPNYKVRVVKSKDESEWVKVENAHEALVSYEDFMAVK 304 Query: 282 -----EIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSL--HGYYVCPMR 334 ++R +P + +L + C C MI V + YYVC Sbjct: 305 VMMQRDMRCSP--------DQDEAHLFSGFLFCGDCQQPMIRKTVPSKTKKYIYYVCSTN 356 Query: 335 RLHRCDRP 342 + R P Sbjct: 357 KHSRTCSP 364 >UniRef50_A3XTC0 Recombinase-related protein n=1 Tax=Vibrio sp. MED222 RepID=A3XTC0_9VIBR Length = 492 Score = 42.4 bits (98), Expect = 0.044, Method: Compositional matrix adjust. Identities = 70/302 (23%), Positives = 128/302 (42%), Gaps = 47/302 (15%) Query: 46 EDLGLSAFKGKHA-QSGAFSEFLDAIE-------HGYILPGTTLLVESLDRLSREKVGEA 97 +D G SAFKG+H + A FL +E + ILP L+VE +DRL+R + + Sbjct: 2 DDQGKSAFKGEHVLEESALGGFLHKLEKKLLVFANDKILP--LLVVEEIDRLTRLEPDDG 59 Query: 98 IERLKLILNHGIDVITL----CDNTVYN-IDSLNEPYSLIKAILIAQRANEESEIKSSRV 152 E L ++ + +D+ + C+ +++ + ++ S I +L A++ S+ S RV Sbjct: 60 QELLLRLMRY-VDICVVEPSGCNYQLFSRKGNGSDIGSNILLLLKIYGAHDYSKKLSKRV 118 Query: 153 KLSWKKKRQDALESGTIMT-ASCPRWLS--------LDDKRTAFVPDPDRVKTIELIFKL 203 + + + A+ G + CP WL+ L DK + + KT E + K Sbjct: 119 RDAQDRSTLAAINHGKALDFGKCPYWLTKIPDGGYELSDKWASVIR-----KTFEFLIKG 173 Query: 204 --------RMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLANKALIG-ICVPSY 254 R+ + ++ +D + W S + L+ N+ +IG I + ++ Sbjct: 174 LTPTQVANRLNELKIPTASRERSDGGKGESLESSAKWTLSKVNTLMVNRRVIGWIKLKNH 233 Query: 255 RARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGN 314 +EI YP V+ D F+ E+ I+ ++ + +L C CG Sbjct: 234 D------TEI-NLYPAVVDDATFHKAVEL-AGKRKITTKNRLGTIKSLFAGFSYCYMCGE 285 Query: 315 TM 316 M Sbjct: 286 RM 287 >UniRef50_C8XI68 Resolvase domain protein n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XI68_NAKMY Length = 582 Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 17/116 (14%) Query: 233 GPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISN 292 G + IE +L++ G R I G + +IS LF VQ++ A N Sbjct: 242 GSTTIENILSDPFFAGWVQVDGRL-------IKGRHEAIISQALFDRVQDVLEARS--RN 292 Query: 293 SSKNPMLINLLRTVMKCEACG-----NTMI---VHAVSGSLHGYYVCPMRRLHRCD 340 S+++ +L + L+ ++ C C N +I V SG HGYY+C R+ CD Sbjct: 293 SNRDRVLYHYLKGLLVCGRCAQAGRANRLIYTQVKGRSGEYHGYYLCRGRQKKTCD 348 >UniRef50_C7GGZ9 Site-specific recombinase, resolvase family n=4 Tax=Bacteria RepID=C7GGZ9_9FIRM Length = 547 Score = 42.0 bits (97), Expect = 0.054, Method: Compositional matrix adjust. Identities = 72/365 (19%), Positives = 144/365 (39%), Gaps = 57/365 (15%) Query: 3 KAIAYMRFSSPGQMSGD--SLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 K Y+R S+ + D +L QR LI ++ D +D Y+ G Sbjct: 24 KTAIYVRLSAEKDETRDRKTLINQRNLIKNFV----DQQMDMEVYDIYMDDEISGTTFDR 79 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSRE--KVGEAIERLKLILNHGIDVITLCDNT 118 F + + G I ++V+ L RL R+ + G +ER+ ++N I + + DN Sbjct: 80 PEFERMMSDMRAGRI---NCIVVKDLSRLGRDYIETGNLVERVFPMMN--IRFVAITDN- 133 Query: 119 VYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESG--TIMTASCPR 176 DS + L+ A+ N +++ + + +Q+A+E G T A + Sbjct: 134 ---YDSSKKDADLMVAV-----TNIANDLYAKDISKKISASKQEAMEKGIPTGNVAYGYK 185 Query: 177 WLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAI-------------AKYLNDHAVK 223 + ++K V D + + IF E+ +L+++ A+Y H ++ Sbjct: 186 VVFNENKVKVMVEDKEAADVVRWIFN-EAEKGTLHSVIAAELNAKHILTPAQYRVRHNIE 244 Query: 224 NFSGKESA-WGPSVIEKLLANKALIG--------ICVPSYRARGKGISE----IAGYYPR 270 W + ++L N+ IG +C+ + R + ++ Sbjct: 245 KLEKLSGVKWTVDTLSQILKNEVYIGRYVTGKDRVCLYRHEKRHTTNKDEWYVFENHHIA 304 Query: 271 VISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYV 330 +I+ + FYAVQ+ + + +N+L+ + C CG+++ +H Y+ Sbjct: 305 LITKEQFYAVQKNKRKVIKPAKKQ----TVNMLKGKITCGCCGSSIHIHP--EKYGKVYM 358 Query: 331 CPMRR 335 C R+ Sbjct: 359 CTHRK 363 >UniRef50_O05415 TnpX n=7 Tax=Firmicutes RepID=O05415_CLOPE Length = 707 Score = 42.0 bits (97), Expect = 0.062, Method: Compositional matrix adjust. Identities = 88/396 (22%), Positives = 154/396 (38%), Gaps = 87/396 (21%) Query: 7 YMRFSSPGQMSGDS--LNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFS 64 Y R S ++G+S + Q++ + ++ + N + + + D G F G + F Sbjct: 11 YERLSRDDDLTGESNSITNQKKYLEDYARRNG--FENIRHFTDDG---FSGVNFNRPGFQ 65 Query: 65 EFLDAIEHGYILPGTTLLVESLDRLSRE--KVGEAIERLK-------LILNHGIDVITLC 115 + +E G + TL+V+ + RL R +VG E L L +N+ ID Sbjct: 66 SLIKEVEAGNV---ETLIVKDMSRLGRNYLQVGFYTEVLFPQKNVRFLAINNSIDSNNAS 122 Query: 116 DNTVYN-IDSLNEPYSL-----IKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTI 169 DN ++ +NE Y+ IKAI A+ ++ G Sbjct: 123 DNDFAPFLNIMNEWYAKDTSNKIKAIFDAR------------------------MKDGKR 158 Query: 170 MTASCPR-WLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAV------ 222 + S P + L + V DP + ++ IF L + +S AIA+ L + V Sbjct: 159 CSGSIPYGYNRLPSDKQTLVVDPVASEVVKRIFTLANDGKSTRAIAEILTEEKVLTPAAY 218 Query: 223 ------KNFSGKESA----WGPSVIEKLLANKALIGICV------PSYR-ARGKGISEIA 265 + ++G + W S I +L + +G V +++ + K E Sbjct: 219 AKEYHPEQYNGNKFTNPYLWAMSTIRNILGRQEYLGHTVLRKSVSTNFKLHKRKSTDEEE 278 Query: 266 GY-YPR----VISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHA 320 Y +P +IS +L+ +VQ+ R ++ +S N L + C CG M + Sbjct: 279 QYVFPNTHEPIISQELWDSVQKRRSR---VNRASAWGTHSNRLSGYLYCADCGRRMTLQT 335 Query: 321 ----VSGSLHGYYVCP--MRRLHRCDRPSIKRDLVD 350 GS+ Y C R++ C SI D V+ Sbjct: 336 HYSKKDGSVQYSYRCGGYASRVNSCTSHSISTDNVE 371 >UniRef50_C0WGL8 Site-specific recombinase n=1 Tax=Corynebacterium accolens ATCC 49725 RepID=C0WGL8_9CORY Length = 494 Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust. Identities = 78/342 (22%), Positives = 136/342 (39%), Gaps = 45/342 (13%) Query: 45 YEDLGLSAFKGKHAQSGAFSEFL-DAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKL 103 Y D G++ KH + F + + DA++ L ++ +S+ R +R V + + ++L Sbjct: 42 YTDEGITGTSTKHRE--GFKQMITDALDGKIDL----IITKSVSRFARNTV-DTLTHVRL 94 Query: 104 ILNHGIDVITLCDNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDA 163 + + G++V +N ++ +DS E I + L A EES S V +K+ D Sbjct: 95 LKDRGVEVYFEKEN-IWTLDSKGELLITIMSSL----AQEESRSISENVTWGHRKRFVD- 148 Query: 164 LESGTIMTASCPRWLSLDDKRTA---FVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDH 220 G +M P L K+ A D +R + I+ L + +S+ I L Sbjct: 149 ---GKVM---VPYKSLLGYKKGADGNLAIDEERAPVVREIYGLFLAGKSIREIKDTLETE 202 Query: 221 AVKNFSGKESAWGPSVIEKLLANKALIG--ICVPSYRA--------RGKGISEIAGYY-- 268 GK + W + +L+N+ G + +Y A R G E+A YY Sbjct: 203 GHLTPRGK-TTWHVTTTRSILSNEKYKGDALLQKTYTADFLTKTIKRNDG--EVAQYYVT 259 Query: 269 ---PRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSL 325 +I ++ VQ G + SK ++L + +KC CG S + Sbjct: 260 GNHAPIIGPEVRDQVQYELATRHGEGSGSK----LHLFSSRLKCADCGGWYGRKTWSSTT 315 Query: 326 HGYYVCPMRRLHRCDRPSIKRDLVDYNIINELLFNCSKIQPV 367 + + V H D+ L D+ I L S++ P Sbjct: 316 NKHTVWHCNNKHAGDQVCATPTLRDHQIKTAFLTALSQLGPA 357 >UniRef50_Q2JEJ8 Recombinase n=1 Tax=Frankia sp. CcI3 RepID=Q2JEJ8_FRASC Length = 743 Score = 41.6 bits (96), Expect = 0.075, Method: Compositional matrix adjust. Identities = 89/366 (24%), Positives = 157/366 (42%), Gaps = 57/366 (15%) Query: 2 KKAIAYMRFSSPGQMSGD------SLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKG 55 ++AIAY R SS GQ++ D SL QR + + +D Y D G S G Sbjct: 12 EQAIAYYRVSSSGQVNTDYDPEGISLPAQRVACKQRARELGVVLVDE--YIDPGKS---G 66 Query: 56 KH-AQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAI-----ERLKLILNHGI 109 K Q AF E + I+ + + V +L R +R + +AI ERL Sbjct: 67 KTIDQRPAFQEMIARIKADRHI--KHVFVYALSRFARNRYDDAIMMMTLERLG------- 117 Query: 110 DVITLCDNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTI 169 + L T N+D+ ++ I + E +++ S + +K Q A + GT+ Sbjct: 118 --VQLHSATEKNLDTTPAGQAMHGMIAVFN----EYQVRVSGEDIKYKMG-QKAKKGGTL 170 Query: 170 MTASCPRWLSLDDK------RTAFVPDPDRVKTIELIFKLRMERR-SLNAIAKYLNDHAV 222 A +L++ ++ RT + DP+R + + F+L + + + + L + Sbjct: 171 GVAPLG-YLNVREQFEGREVRTVAL-DPERAPFVVMAFELYATGKFNFHTLRDALTEAGF 228 Query: 223 KNFSGKESAWGPSVIEK---LLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYA 279 + K+ A P I K +L ++ +G R G+ E G + +IS +LF Sbjct: 229 RTRPTKQWASRPISINKIGEMLRDRYYLGYV----RYDGE---EYEGRHEPLISQELFDR 281 Query: 280 VQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIV---HAVSGSLHGYYVCPMRRL 336 VQ + A +++ + L+ ++ C+ C +I+ + SG + YY+C R Sbjct: 282 VQRVLYAER--RAGTRHRTHDHYLKGLVWCDRCRRRLIIMPGKSKSGVRYFYYICQGRLD 339 Query: 337 HRCDRP 342 H+CD P Sbjct: 340 HQCDLP 345 >UniRef50_B0P747 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B0P747_9FIRM Length = 511 Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust. Identities = 48/201 (23%), Positives = 74/201 (36%), Gaps = 34/201 (16%) Query: 187 FVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFS------------GKESAWGP 234 V D +T+ LIF L + IA LN + N + GK + W Sbjct: 173 LVIDAQAAETVRLIFSLCLSGMGKQKIAAELNRRGILNPTAYKRARGWICPGGKSALWSH 232 Query: 235 SVIEKLLANKALIGICVP------SYRAR------GKGISEIAGYYPRVISDDLFYAVQE 282 + + ++L N+ G V SY++ + + G + +I +F VQ Sbjct: 233 ATVGRILHNELYTGTMVQGVKHKISYKSNLCVSVPREAWIRVPGTHEAIIDPQVFQTVQS 292 Query: 283 IRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMI--VHAVSGSLHGYYVCPMRRLHR-- 338 + S + L L+R C ACG +MI H G Y C R Sbjct: 293 VLARRTRSDGSGQTHPLAGLVR----CGACGASMIRVSHTYKGKKRSYLQCGRYASDRAG 348 Query: 339 --CDRPSIKRDLVDYNIINEL 357 C R SI+ D++ + EL Sbjct: 349 ALCTRHSIRLDILTDAVKREL 369 >UniRef50_C6P9P0 Recombinase n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6P9P0_CLOTS Length = 524 Score = 41.2 bits (95), Expect = 0.094, Method: Compositional matrix adjust. Identities = 79/369 (21%), Positives = 135/369 (36%), Gaps = 95/369 (25%) Query: 45 YEDLGLSAFKGKHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSRE--KVGEAIERL- 101 Y D G+S G + F +D +E G I ++ + L RL R+ + G +E++ Sbjct: 54 YIDDGVS---GTTFERDDFKRMIDDVECGLI---NCIITKDLSRLGRDYIETGRYLEKVF 107 Query: 102 ------KLILNHGIDVITLCDNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLS 155 + LN G+D + D+++ + +N+ Y+ K I R N S++K Sbjct: 108 PEYGVRYIALNDGVDTLKGEDDSIPFRNVVNDMYA--KDISKKIRFNLHSKMKE------ 159 Query: 156 WKKKRQDALESGTIMTASCPRWLSLD-DKRTAFVPDPD-RVKTIELIFKLRMERRSLNAI 213 G + A P + D D + VP D + ++ IF L E I Sbjct: 160 -----------GLYIGAFAPYGYTKDPDNKNRLVPANDITTQAVKRIFSLYTEGFGKQKI 208 Query: 214 AKYLNDHAV----------KNFSGKESAWGPSVIEKLLANKALIGICVPSYRARGKGISE 263 AK L D N S K W + + ++L N+ IG V R + + Sbjct: 209 AKILTDEGYPTPAESKRNYANPSQKIKMWNSNAVHRILTNEVYIGTVVQHKRKKVSYKVK 268 Query: 264 IAGYYPR------------VISDDLFYAVQEI-------RLAPFGISNSSKNPMLINLLR 304 P +I +++F+ VQ+I + P +++ L Sbjct: 269 KVKDVPEEEWIKKTHMHEPIIDENIFWQVQDIIQERAKLKFRPGHVTH---------LFS 319 Query: 305 TVMKCEACGNTM-----------IVHAVSGSLHGY-------YVCPMRRLHRC---DRPS 343 KC CG+ M + G+ Y + P +L + D S Sbjct: 320 GKAKCGDCGSYMGYFYDKDRKAPCWKLICGAFRKYGSKACTMHSIPEEKLKQIVLDDLKS 379 Query: 344 IKRDLVDYN 352 I ++VD+N Sbjct: 380 IANEIVDFN 388 >UniRef50_C6JA41 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JA41_9FIRM Length = 645 Score = 41.2 bits (95), Expect = 0.095, Method: Compositional matrix adjust. Identities = 50/200 (25%), Positives = 86/200 (43%), Gaps = 28/200 (14%) Query: 108 GIDVITLCDNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESG 167 G++V + DN ++ +D E ++ L+A A EES S RVK K R + + G Sbjct: 125 GVEVFFIDDN-IWTMDGDGE----LRLSLMATLAQEESRKTSERVKAGQKISRDNGVLYG 179 Query: 168 TIMTASCPRWLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSG 227 L D +V + ++ +T+ +I+ L ++ IAK L + K SG Sbjct: 180 N------GNILGYDRVGDTYVINEEQAETVRMIYDLYLQGYGSMKIAKILTERKRKTASG 233 Query: 228 KESAWGPSVIEKLLANKALIGI-CVPSYRARG----KGISE--------IAGYYPRVISD 274 W S I + + N G C R+ K I+ + G +P +IS Sbjct: 234 L-IKWSVSNIMRAIKNATYTGTKCYNKSRSNNFLEQKRINNLDMSTYEYVEGDFPAIISQ 292 Query: 275 DLF---YAVQEIRLAPFGIS 291 +++ A++E R+ P +S Sbjct: 293 EIWDKAQAIRESRVKPVCVS 312 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P77698 Uncharacterized protein ybcK n=22 Tax=Escherichi... 673 0.0 UniRef50_C6URU6 Putative uncharacterized protein n=2 Tax=Enterob... 477 e-133 UniRef50_B3WZ52 Hypothetical bacteriophage protein n=1 Tax=Shige... 407 e-112 UniRef50_Q88NT6 Recombinase-related protein n=1 Tax=Pseudomonas ... 372 e-101 UniRef50_B8DJ05 Recombinase n=1 Tax=Desulfovibrio vulgaris str. ... 362 2e-98 UniRef50_B3G100 Recombinase/resolvase n=1 Tax=Pseudomonas aerugi... 359 2e-97 UniRef50_Q30XM6 Putative uncharacterized protein n=1 Tax=Desulfo... 357 6e-97 UniRef50_C7HJH4 Resolvase domain protein n=1 Tax=Clostridium the... 356 1e-96 UniRef50_A6T2W2 Site-specific recombinase n=1 Tax=Janthinobacter... 354 5e-96 UniRef50_Q1QRV3 Recombinase n=1 Tax=Nitrobacter hamburgensis X14... 350 8e-95 UniRef50_Q2YCV5 Recombinase n=1 Tax=Nitrosospira multiformis ATC... 348 4e-94 UniRef50_Q46W15 Recombinase n=1 Tax=Ralstonia eutropha JMP134 Re... 344 5e-93 UniRef50_Q2BR60 Putative uncharacterized protein n=1 Tax=Neptuni... 333 1e-89 UniRef50_Q87J19 Putative site-specific recombinase n=1 Tax=Vibri... 332 3e-89 UniRef50_Q1V893 Putative uncharacterized protein n=1 Tax=Vibrio ... 330 6e-89 UniRef50_Q98DK0 Site-specific recombinase n=1 Tax=Mesorhizobium ... 328 4e-88 UniRef50_A5L3F9 Putative uncharacterized protein n=1 Tax=Vibrion... 327 7e-88 UniRef50_B9M114 Recombinase n=1 Tax=Geobacter sp. FRC-32 RepID=B... 327 9e-88 UniRef50_Q3J212 Putative site-specific recombinase n=1 Tax=Rhodo... 322 3e-86 UniRef50_D0XHM7 Putative uncharacterized protein n=1 Tax=Vibrio ... 321 4e-86 UniRef50_A9W3Z8 Recombinase n=1 Tax=Methylobacterium extorquens ... 320 9e-86 UniRef50_Q1Z7J0 Site-specific recombinase n=1 Tax=Photobacterium... 320 9e-86 UniRef50_Q2BRM1 Site-specific recombinase n=1 Tax=Neptuniibacter... 319 1e-85 UniRef50_B9M0D0 Recombinase n=1 Tax=Geobacter sp. FRC-32 RepID=B... 319 1e-85 UniRef50_Q39QW8 Resolvase-like:Recombinase n=1 Tax=Geobacter met... 319 2e-85 UniRef50_B5XQB9 Site-specific recombinase, resolvase family n=6 ... 318 4e-85 UniRef50_Q0T5X8 Hypothetical bacteriophage protein n=5 Tax=Enter... 316 1e-84 UniRef50_A9APW9 Recombinase n=16 Tax=root RepID=A9APW9_BURM1 311 4e-83 UniRef50_Q3KAI6 Putative integrase/recombinase n=1 Tax=Pseudomon... 310 8e-83 UniRef50_B0K4R6 Recombinase n=9 Tax=Clostridia RepID=B0K4R6_THEPX 309 2e-82 UniRef50_B9XI16 Resolvase domain protein n=1 Tax=bacterium Ellin... 306 1e-81 UniRef50_UPI0001BC6B74 site-specific recombinase n=1 Tax=Vibrio ... 303 1e-80 UniRef50_B5EDN9 Recombinase n=1 Tax=Geobacter bemidjiensis Bem R... 302 2e-80 UniRef50_C9QK00 Site-specific recombinase n=1 Tax=Vibrio orienta... 291 4e-77 UniRef50_A6D403 Resolvase-like:Recombinase protein n=1 Tax=Vibri... 288 5e-76 UniRef50_Q0G2L1 Putative uncharacterized protein n=1 Tax=Fulvima... 286 1e-75 UniRef50_A8GC08 Resolvase domain n=1 Tax=Serratia proteamaculans... 283 1e-74 UniRef50_C7CL55 Putative recombinase n=1 Tax=Methylobacterium ex... 278 3e-73 UniRef50_B3X0B7 Recombinase n=1 Tax=Shigella dysenteriae 1012 Re... 276 1e-72 UniRef50_A6D144 Possible recombinase n=1 Tax=Vibrio shilonii AK1... 276 2e-72 UniRef50_A6D1G1 Recombinase n=2 Tax=Vibrio RepID=A6D1G1_9VIBR 272 2e-71 UniRef50_Q02Q54 Possible recombinase n=1 Tax=Pseudomonas aerugin... 272 2e-71 UniRef50_UPI0001A445A7 hypothetical protein PcarcW_00494 n=1 Tax... 269 2e-70 UniRef50_Q0F1R0 Recombinase n=2 Tax=Mariprofundus ferrooxydans P... 269 2e-70 UniRef50_B5WBE5 Resolvase domain n=1 Tax=Burkholderia sp. H160 R... 268 4e-70 UniRef50_C7IHA5 Resolvase domain protein n=1 Tax=Clostridium pap... 268 4e-70 UniRef50_C1D595 Recombinase n=1 Tax=Laribacter hongkongensis HLH... 266 1e-69 UniRef50_C2F160 Recombinase n=2 Tax=Lactobacillus reuteri RepID=... 265 3e-69 UniRef50_A7MFZ6 Putative uncharacterized protein n=1 Tax=Cronoba... 265 3e-69 UniRef50_B0T614 Recombinase n=1 Tax=Caulobacter sp. K31 RepID=B0... 265 4e-69 UniRef50_A7VSK4 Putative uncharacterized protein n=1 Tax=Clostri... 262 2e-68 UniRef50_C9QGK9 Recombinase n=1 Tax=Vibrio orientalis CIP 102891... 262 3e-68 UniRef50_C0ZHM9 Putative DNA recombinase n=1 Tax=Brevibacillus b... 261 4e-68 UniRef50_UPI0001C355EF site-specific recombinase n=1 Tax=Clostri... 259 2e-67 UniRef50_UPI00016C51D7 putative integrase/recombinase n=1 Tax=Ge... 259 2e-67 UniRef50_UPI0001C37799 recombinase n=1 Tax=Ruminococcus flavefac... 258 3e-67 UniRef50_Q3Z6A0 Resolvase domain protein n=6 Tax=Dehalococcoides... 258 4e-67 UniRef50_C7HAC5 DNA integration/recombination protein n=4 Tax=Fa... 256 1e-66 UniRef50_A5FSM5 Resolvase, N-terminal domain n=2 Tax=Dehalococco... 253 1e-65 UniRef50_C7WYU0 Site-specific recombinase n=2 Tax=Enterococcus f... 253 1e-65 UniRef50_A5VBR4 Resolvase, N-terminal domain n=12 Tax=Alphaprote... 253 1e-65 UniRef50_Q489L6 Putative site-specific recombinase n=1 Tax=Colwe... 253 2e-65 UniRef50_Q3Z3B5 Putative uncharacterized protein n=1 Tax=Shigell... 251 3e-65 UniRef50_Q5WE11 Site-specific recombinase for integration and ex... 251 7e-65 UniRef50_C1I4H9 DNA integration/recombination protein n=4 Tax=Cl... 249 2e-64 UniRef50_A6LK15 Resolvase, N-terminal domain n=1 Tax=Thermosipho... 249 2e-64 UniRef50_A6LN32 Resolvase, N-terminal domain n=1 Tax=Thermosipho... 248 4e-64 UniRef50_D1AQX9 Recombinase n=1 Tax=Sebaldella termitidis ATCC 3... 248 4e-64 UniRef50_C9LP68 DNA integration/recombination protein n=1 Tax=Di... 247 8e-64 UniRef50_C5RQ70 Resolvase domain protein n=4 Tax=Firmicutes RepI... 247 8e-64 UniRef50_C5TBX4 Resolvase domain protein (Fragment) n=1 Tax=Acid... 246 1e-63 UniRef50_B7JIH4 Resolvase domain protein n=4 Tax=Bacillus cereus... 246 1e-63 UniRef50_Q883N3 Conserved domain protein n=1 Tax=Pseudomonas syr... 246 2e-63 UniRef50_Q5XBF4 Site-specific recombinase n=9 Tax=Bacteria RepID... 245 2e-63 UniRef50_A7HP92 Resolvase domain n=1 Tax=Parvibaculum lavamentiv... 245 3e-63 UniRef50_Q65CS9 Site-specific DNA recombinase n=1 Tax=Bacillus l... 244 4e-63 UniRef50_C4F8C7 Putative uncharacterized protein n=1 Tax=Collins... 244 7e-63 UniRef50_C4ZFI3 Site-specific recombinase n=3 Tax=Clostridiales ... 244 7e-63 UniRef50_UPI0001BC4A50 recombinase n=2 Tax=Fusobacterium RepID=U... 244 7e-63 UniRef50_C0FPH3 Putative uncharacterized protein n=2 Tax=Clostri... 243 1e-62 UniRef50_A7VUQ9 Putative uncharacterized protein n=2 Tax=Clostri... 243 2e-62 UniRef50_A5ZMY9 Putative uncharacterized protein n=2 Tax=Clostri... 243 2e-62 UniRef50_A0LPU3 Recombinase n=6 Tax=Deltaproteobacteria RepID=A0... 242 2e-62 UniRef50_UPI0001973930 site-specific recombinase n=1 Tax=Clostri... 241 6e-62 UniRef50_Q67SM2 Site-specific recombinase n=1 Tax=Symbiobacteriu... 241 7e-62 UniRef50_C1XY58 Site-specific recombinase, DNA invertase Pin n=2... 240 8e-62 UniRef50_A3SXC7 Hypothetical bacteriophage protein n=1 Tax=Sulfi... 239 2e-61 UniRef50_A6D0Z7 Putative uncharacterized protein n=1 Tax=Vibrio ... 239 2e-61 UniRef50_C5UY92 Resolvase n=1 Tax=Clostridium botulinum E1 str. ... 238 3e-61 UniRef50_A5TXM5 Possible recombinase n=3 Tax=Fusobacterium RepID... 236 1e-60 UniRef50_A5Z6W6 Putative uncharacterized protein n=2 Tax=Clostri... 236 2e-60 UniRef50_Q07ZW2 Recombinase n=1 Tax=Shewanella frigidimarina NCI... 235 3e-60 UniRef50_A5ZPV0 Putative uncharacterized protein n=1 Tax=Ruminoc... 234 6e-60 UniRef50_UPI00019734DD site-specific recombinase n=1 Tax=Clostri... 234 6e-60 UniRef50_D1N7I8 Resolvase domain protein n=1 Tax=Victivallis vad... 233 1e-59 UniRef50_C0M6W3 Putative phage integrase n=1 Tax=Streptococcus e... 233 1e-59 UniRef50_C6JB72 Resolvase domain-containing protein n=1 Tax=Rumi... 233 1e-59 UniRef50_D1C6M6 Resolvase domain protein n=1 Tax=Sphaerobacter t... 231 6e-59 UniRef50_B5QBH4 Resolvase domain protein n=1 Tax=Salmonella ente... 229 2e-58 UniRef50_Q7U778 Possible site-specific recombinase n=1 Tax=Synec... 229 2e-58 UniRef50_Q72WY0 DNA recombinase, putative n=7 Tax=Bacillus cereu... 229 3e-58 UniRef50_Q3DFF9 Site-specific recombinase, resolvase family, put... 228 6e-58 UniRef50_A3VUU7 Putative uncharacterized protein n=1 Tax=Parvula... 227 6e-58 UniRef50_B0P5W1 Putative uncharacterized protein n=1 Tax=Anaerot... 226 1e-57 UniRef50_A5FPJ2 Resolvase, N-terminal domain n=8 Tax=root RepID=... 226 2e-57 UniRef50_D2BJ82 SsrA integrase n=2 Tax=Dehalococcoides RepID=D2B... 224 8e-57 UniRef50_A5KP69 Putative uncharacterized protein n=2 Tax=Clostri... 224 9e-57 UniRef50_A9NFR7 Serine recombinase n=1 Tax=Acholeplasma laidlawi... 223 1e-56 UniRef50_Q1VBK2 Resolvase-like:Recombinase protein n=1 Tax=Vibri... 223 1e-56 UniRef50_A5FQB3 Resolvase, N-terminal domain n=6 Tax=Dehalococco... 223 2e-56 UniRef50_B0MRT0 Putative uncharacterized protein n=1 Tax=Eubacte... 223 2e-56 UniRef50_A5N4T4 Putative uncharacterized protein n=7 Tax=Bacteri... 222 3e-56 UniRef50_Q7U6I7 Partial homology to phage recombinase n=1 Tax=Sy... 221 4e-56 UniRef50_Q1J4R9 Site-specific recombinase n=10 Tax=Bacteria RepI... 221 6e-56 UniRef50_B3Z2D3 Cassette chromosome recombinase B n=2 Tax=Bacill... 220 9e-56 UniRef50_D1NLU0 Resolvase domain protein n=3 Tax=Clostridiales R... 220 9e-56 UniRef50_C5VNM7 Site-specific recombinase, resolvase family n=1 ... 220 1e-55 UniRef50_B5IL90 Putative phage recombinase n=1 Tax=Cyanobium sp.... 219 2e-55 UniRef50_B2V2D8 Putative resolvase n=2 Tax=Clostridium RepID=B2V... 218 3e-55 UniRef50_B1IBJ7 Low similarity to site-specific recombinase n=34... 216 1e-54 UniRef50_A3DG43 Recombinase n=6 Tax=root RepID=A3DG43_CLOTH 216 1e-54 UniRef50_A3DG42 Recombinase n=7 Tax=root RepID=A3DG42_CLOTH 216 2e-54 UniRef50_C0E5J2 Putative uncharacterized protein n=1 Tax=Coryneb... 215 3e-54 UniRef50_B8FU52 Resolvase domain protein n=2 Tax=Clostridiales R... 213 1e-53 UniRef50_C6JGM7 Putative uncharacterized protein n=1 Tax=Ruminoc... 213 1e-53 UniRef50_A7VWP7 Putative uncharacterized protein n=1 Tax=Clostri... 213 1e-53 UniRef50_C0W970 Site-specific recombinase n=1 Tax=Acidaminococcu... 212 3e-53 UniRef50_B3E518 Resolvase domain n=1 Tax=Geobacter lovleyi SZ Re... 212 3e-53 UniRef50_Q97JP5 Site-specific DNA recombinase n=1 Tax=Clostridiu... 212 3e-53 UniRef50_C7HT51 TnpX site-specific recombinase n=2 Tax=Clostridi... 211 4e-53 UniRef50_C7GH36 Site-specific recombinase, resolvase family n=1 ... 211 7e-53 UniRef50_UPI0001BC7310 putative site-specific recombinase n=1 Ta... 210 9e-53 UniRef50_C8VVS5 Resolvase domain protein n=19 Tax=Firmicutes Rep... 209 2e-52 UniRef50_A8SCA0 Putative uncharacterized protein n=1 Tax=Faecali... 209 2e-52 UniRef50_C0ESV4 Putative uncharacterized protein n=1 Tax=Eubacte... 209 3e-52 UniRef50_C5V7P9 Recombinase (Fragment) n=3 Tax=Gallionella ferru... 208 3e-52 UniRef50_Q3K263 Prophage LambdaSa04, site-specific recombinase, ... 208 5e-52 UniRef50_UPI0001905A69 hypothetical protein RetlB5_21195 n=1 Tax... 205 3e-51 Sequences not found previously or not previously below threshold: UniRef50_C7H883 Resolvase domain protein n=4 Tax=Faecalibacteriu... 267 8e-70 UniRef50_C7H8A3 Resolvase domain protein n=22 Tax=Clostridia Rep... 265 3e-69 UniRef50_A6NTU2 Putative uncharacterized protein n=1 Tax=Bactero... 245 3e-63 UniRef50_A6P1I2 Putative uncharacterized protein n=1 Tax=Bactero... 243 1e-62 UniRef50_B8ENV0 Resolvase domain protein n=1 Tax=Methylocella si... 241 6e-62 UniRef50_C4Z7Z8 Site-specific recombinase n=1 Tax=Eubacterium re... 238 3e-61 UniRef50_Q8NYW8 Cassette chromosome recombinase B n=83 Tax=Bacil... 237 9e-61 UniRef50_C7G6N5 DNA integration/recombination protein n=2 Tax=Cl... 235 3e-60 UniRef50_C2Z4G3 Site-specific recombinase for integration and ex... 235 3e-60 UniRef50_Q2JCD2 Resolvase-like n=3 Tax=Actinomycetales RepID=Q2J... 234 6e-60 UniRef50_Q3SMV6 Resolvase n=4 Tax=Rhizobiales RepID=Q3SMV6_NITWN 232 2e-59 UniRef50_C7GGS5 Site-specific recombinase, phage integrase famil... 232 3e-59 UniRef50_UPI00016C43FD Resolvase, N-terminal domain n=2 Tax=Gemm... 231 4e-59 UniRef50_A9BFJ9 Resolvase domain n=14 Tax=Bacteria RepID=A9BFJ9_... 230 1e-58 UniRef50_D2LV95 Resolvase domain protein n=1 Tax=Bacillus cellul... 229 1e-58 UniRef50_B0SYD9 Resolvase domain n=2 Tax=Alphaproteobacteria Rep... 229 2e-58 UniRef50_B0TCI3 DNA recombinase, putative n=22 Tax=Bacteria RepI... 229 2e-58 UniRef50_B8R885 Gp20 n=2 Tax=Bacillus phage TP21-L RepID=B8R885_... 229 2e-58 UniRef50_D2BGC7 Resolvase domain protein, PinR type n=2 Tax=Deha... 227 7e-58 UniRef50_A7GVM1 Resolvase domain n=1 Tax=Bacillus cytotoxicus NV... 227 9e-58 UniRef50_A7B0Q2 Putative uncharacterized protein n=4 Tax=Clostri... 227 9e-58 UniRef50_C0VZG2 Site-specific recombinase n=1 Tax=Actinomyces co... 226 1e-57 UniRef50_C2RWE8 Cassette chromosome recombinase B n=1 Tax=Bacill... 226 1e-57 UniRef50_C4ZE41 Site-specific recombinase n=17 Tax=Bacteria RepI... 226 1e-57 UniRef50_C0X7M1 Cassette chromosome recombinase B n=5 Tax=Entero... 226 2e-57 UniRef50_UPI0001692EF6 hypothetical protein Plarl_21271 n=1 Tax=... 225 2e-57 UniRef50_A4X6D7 Resolvase, N-terminal domain n=1 Tax=Salinispora... 225 3e-57 UniRef50_A6NPY6 Putative uncharacterized protein n=1 Tax=Bactero... 225 3e-57 UniRef50_A6NXM2 Putative uncharacterized protein n=4 Tax=Bacteri... 224 4e-57 UniRef50_B5DC77 Putative recombinase (Fragment) n=1 Tax=Geobacil... 224 5e-57 UniRef50_D0AKJ5 Resolvase n=9 Tax=Bacilli RepID=D0AKJ5_ENTFC 224 6e-57 UniRef50_A5ZV57 Putative uncharacterized protein n=4 Tax=Clostri... 224 6e-57 UniRef50_C9S0X0 Resolvase domain protein n=3 Tax=root RepID=C9S0... 224 6e-57 UniRef50_B0TD54 Resolvase, n-terminal:recombinase, putative n=3 ... 224 7e-57 UniRef50_A3DBB4 Recombinase n=1 Tax=Clostridium thermocellum ATC... 224 9e-57 UniRef50_C7GIC8 TnpX site-specific recombinase n=22 Tax=Bacteria... 223 1e-56 UniRef50_C6JGM9 Putative uncharacterized protein n=1 Tax=Ruminoc... 223 1e-56 UniRef50_A0Q362 Site-specific recombinase, resolvase family, put... 223 1e-56 UniRef50_D0LPM7 Resolvase domain protein n=2 Tax=Haliangium ochr... 223 2e-56 UniRef50_B0P747 Putative uncharacterized protein n=2 Tax=Bacteri... 222 3e-56 UniRef50_UPI0001C3729C phage integrase family site specific reco... 221 4e-56 UniRef50_C0FPH2 Putative uncharacterized protein n=2 Tax=Clostri... 221 6e-56 UniRef50_D0LLL4 Resolvase domain protein n=1 Tax=Haliangium ochr... 220 8e-56 UniRef50_C8WS87 Resolvase domain protein n=1 Tax=Alicyclobacillu... 220 9e-56 UniRef50_C6P9P0 Recombinase n=1 Tax=Thermoanaerobacterium thermo... 220 1e-55 UniRef50_C9XQS3 Conjugative transposon site-specific recombinase... 220 1e-55 UniRef50_C1CGJ9 INT n=2 Tax=Streptococcus pneumoniae RepID=C1CGJ... 219 1e-55 UniRef50_D0LQK1 Resolvase domain protein n=12 Tax=Haliangium och... 219 2e-55 UniRef50_C8RU76 Resolvase family prophage LambdaSa04, site-speci... 219 2e-55 UniRef50_UPI0001C3787A resolvase domain protein n=1 Tax=Ruminoco... 219 3e-55 UniRef50_A8SBA3 Putative uncharacterized protein n=1 Tax=Faecali... 218 4e-55 UniRef50_C0ECX6 Putative uncharacterized protein n=1 Tax=Clostri... 218 5e-55 UniRef50_B9IZ84 DNA recombinase, putative n=9 Tax=root RepID=B9I... 217 8e-55 UniRef50_C2KNU8 Site-specific recombinase n=2 Tax=Actinomycetale... 217 9e-55 UniRef50_C6QVK4 Resolvase domain protein n=1 Tax=Geobacillus sp.... 216 1e-54 UniRef50_C6CZ73 Resolvase domain protein n=7 Tax=Bacillales RepI... 216 1e-54 UniRef50_A6NUG8 Putative uncharacterized protein n=2 Tax=Bactero... 216 1e-54 UniRef50_UPI0001C370AB recombinase n=1 Tax=Ruminococcus flavefac... 216 1e-54 UniRef50_C5D538 Recombinase n=2 Tax=Bacillaceae RepID=C5D538_GEOSW 216 2e-54 UniRef50_UPI000169299B site-specific recombinase for integration... 216 2e-54 UniRef50_Q892F0 DNA integration/recombination protein n=1 Tax=Cl... 216 2e-54 UniRef50_A5N289 Putative uncharacterized protein n=3 Tax=Firmicu... 215 3e-54 UniRef50_D1PSJ0 TnpX site-specific recombinase n=1 Tax=Subdoligr... 215 4e-54 UniRef50_A8SHS6 Putative uncharacterized protein n=1 Tax=Faecali... 215 4e-54 UniRef50_Q041M6 Site-specific recombinase, DNA invertase Pin rel... 214 4e-54 UniRef50_C0WGL8 Site-specific recombinase n=1 Tax=Corynebacteriu... 214 8e-54 UniRef50_Q9XJF6 Site-specific integrase n=3 Tax=root RepID=Q9XJF... 213 1e-53 UniRef50_B0NAW3 Putative uncharacterized protein n=2 Tax=Clostri... 213 1e-53 UniRef50_B6FLM9 Putative uncharacterized protein n=1 Tax=Clostri... 213 2e-53 UniRef50_C0B9J7 Putative uncharacterized protein n=2 Tax=Clostri... 213 2e-53 UniRef50_B2IQ45 Site-specific recombinase, resolvase family n=19... 212 3e-53 UniRef50_Q0AWY2 Site-specific recombinase, putative n=7 Tax=Clos... 212 3e-53 UniRef50_B0TD52 Resolvase, n-terminal:recombinase, putative n=5 ... 211 4e-53 UniRef50_UPI0001C355F0 cassette chromosome recombinase B n=1 Tax... 211 6e-53 UniRef50_A1VBU1 Resolvase, N-terminal domain n=1 Tax=Desulfovibr... 211 7e-53 UniRef50_C6LJ39 TnpX site-specific recombinase n=3 Tax=Clostridi... 211 7e-53 UniRef50_D1C6R3 Resolvase domain protein n=1 Tax=Sphaerobacter t... 211 7e-53 UniRef50_C7RGX1 Resolvase domain protein n=12 Tax=Firmicutes Rep... 210 8e-53 UniRef50_UPI0001C3729E phage integrase family site specific reco... 210 8e-53 UniRef50_D2RBA8 TnpX site-specific recombinase family protein n=... 210 1e-52 UniRef50_B7IRZ6 Resolvase domain protein n=17 Tax=Bacillales Rep... 210 1e-52 UniRef50_C3AWE0 U153 integrase n=1 Tax=Bacillus mycoides Rock1-4... 210 1e-52 UniRef50_A0L9E5 Recombinase n=19 Tax=Bacteria RepID=A0L9E5_MAGSM 210 1e-52 UniRef50_A5D4E3 Site-specific recombinases n=1 Tax=Pelotomaculum... 209 2e-52 UniRef50_UPI0001BCECF1 putative integrase n=1 Tax=Selenomonas no... 209 2e-52 UniRef50_C4ZEQ6 Cassette chromosome recombinase B n=35 Tax=Bacte... 209 2e-52 UniRef50_C8SMT4 Recombinase n=1 Tax=Mesorhizobium opportunistum ... 209 2e-52 UniRef50_Q1QGT0 Recombinase n=2 Tax=Bradyrhizobiaceae RepID=Q1QG... 209 2e-52 UniRef50_A5Z6W7 Putative uncharacterized protein n=2 Tax=Clostri... 209 3e-52 UniRef50_UPI0001C361A0 site-specific recombinase n=1 Tax=Clostri... 209 3e-52 UniRef50_UPI0001C37E7C hypothetical protein RflaF_15886 n=1 Tax=... 208 3e-52 UniRef50_A5PDE8 Recombinase n=1 Tax=Erythrobacter sp. SD-21 RepI... 208 4e-52 UniRef50_A5D5X5 Putative uncharacterized protein n=1 Tax=Pelotom... 208 4e-52 UniRef50_C6LFU1 Site-specific recombinase n=1 Tax=Bryantella for... 208 5e-52 UniRef50_UPI0001C37E79 resolvase, n-terminal:recombinase, putati... 208 5e-52 UniRef50_Q0TMZ4 Site-specific recombinase, resolvase family n=2 ... 208 5e-52 UniRef50_D2KRD2 Putative integrase n=1 Tax=Lactobacillus phage p... 208 6e-52 UniRef50_B0TCI6 DNA recombinase, putative n=20 Tax=Bacteria RepI... 208 6e-52 UniRef50_O05415 TnpX n=7 Tax=Firmicutes RepID=O05415_CLOPE 207 7e-52 UniRef50_A5Z7F2 Putative uncharacterized protein n=1 Tax=Eubacte... 207 1e-51 UniRef50_B8I7G9 Resolvase domain protein n=2 Tax=Clostridium Rep... 207 1e-51 UniRef50_Q1CPJ9 Site-specific recombinase n=7 Tax=Streptococcus ... 206 1e-51 UniRef50_A6P2T0 Putative uncharacterized protein n=1 Tax=Bactero... 206 1e-51 UniRef50_C7GCW1 Site-specific recombinase, resolvase family n=17... 206 2e-51 UniRef50_D1C3V6 Resolvase domain protein n=1 Tax=Sphaerobacter t... 206 2e-51 UniRef50_B8I5Z3 Resolvase domain protein n=1 Tax=Clostridium cel... 206 2e-51 UniRef50_B9Z4V7 Resolvase domain protein n=1 Tax=Lutiella nitrof... 206 2e-51 UniRef50_Q188V9 Conjugative transposon site-specific recombinase... 206 2e-51 UniRef50_D2P2Z1 Site-specific DNA recombinase n=2 Tax=Listeria m... 205 3e-51 UniRef50_A9WCX4 Resolvase domain n=2 Tax=Chloroflexus RepID=A9WC... 205 3e-51 UniRef50_Q041M5 Site-specific recombinase, DNA invertase Pin rel... 205 4e-51 UniRef50_A5MYI4 Phage invertase/recombinase-related protein n=6 ... 205 4e-51 >UniRef50_P77698 Uncharacterized protein ybcK n=22 Tax=Escherichia coli RepID=YBCK_ECOLI Length = 508 Score = 673 bits (1736), Expect = 0.0, Method: Composition-based stats. Identities = 508/508 (100%), Positives = 508/508 (100%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS Sbjct: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY Sbjct: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL Sbjct: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL Sbjct: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 Query: 241 LANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLI 300 LANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLI Sbjct: 241 LANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLI 300 Query: 301 NLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINELLFN 360 NLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINELLFN Sbjct: 301 NLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINELLFN 360 Query: 361 CSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTAIAEKIRLLDKELRRASV 420 CSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTAIAEKIRLLDKELRRASV Sbjct: 361 CSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTAIAEKIRLLDKELRRASV 420 Query: 421 SLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVF 480 SLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVF Sbjct: 421 SLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVF 480 Query: 481 KHYPLMKVISAQQAISALKYMVDGEIYF 508 KHYPLMKVISAQQAISALKYMVDGEIYF Sbjct: 481 KHYPLMKVISAQQAISALKYMVDGEIYF 508 >UniRef50_C6URU6 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=C6URU6_ECO5T Length = 375 Score = 477 bits (1227), Expect = e-133, Method: Composition-based stats. Identities = 359/371 (96%), Positives = 363/371 (97%), Gaps = 1/371 (0%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS Sbjct: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY Sbjct: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL Sbjct: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL Sbjct: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 Query: 241 LANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLI 300 LANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLI Sbjct: 241 LANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLI 300 Query: 301 NLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINELLFN 360 NLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINE L Sbjct: 301 NLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINEFLI- 359 Query: 361 CSKIQPVENKK 371 +K ++ +K Sbjct: 360 VAKFNQLKTRK 370 >UniRef50_B3WZ52 Hypothetical bacteriophage protein n=1 Tax=Shigella dysenteriae 1012 RepID=B3WZ52_SHIDY Length = 464 Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats. Identities = 174/475 (36%), Positives = 274/475 (57%), Gaps = 16/475 (3%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDT-ITYEDLGLSAFKGKHAQ 59 M++AI+Y+RFSS Q+ GDS+ RQ +L+ +WL N ++YLD+ ++++DLG SAF GKH + Sbjct: 1 MRRAISYIRFSSERQLKGDSVRRQSKLVTDWLDKNPEFYLDSSLSFKDLGKSAFSGKHLK 60 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 G +FL AIE G + G TLL+ESLDRLSR+ + A E L+ IL G+DV+TL D Sbjct: 61 -GGLGDFLTAIEKGLVKAGDTLLIESLDRLSRQDIDIASELLRRILRAGVDVVTLSDGEH 119 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 Y +SL +P +LIK+ILI QRA+EES KS RV+ +W +K++ + G ++ CP WL Sbjct: 120 YTRESLKDPLALIKSILIMQRAHEESLRKSERVQAAWNRKKEL-ISEGIKVSRRCPAWLK 178 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKN---FSGKESAWGPSV 236 L+D R F PD+V+ ++ F LR++ S AI + LND + ++ K+ W + Sbjct: 179 LNDDRRTFTIIPDKVEVVKRAFDLRLQGLSFWAITRTLNDEGHLSLNQYTPKQKGWSDTA 238 Query: 237 IEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKN 296 ++KLL N+A+IG P+ G E+ GYYP +IS+ LFY VQ++ +G ++ S N Sbjct: 239 VKKLLRNRAVIGCFTPA------GREEVQGYYPAIISESLFYRVQQLNTGQYGRASVSSN 292 Query: 297 PMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINE 356 P+ +NL R ++KC CG T+++ + G Y CP R +RC +I R D I+ Sbjct: 293 PLSVNLFRGIIKCSECGATIVLGGYALKRFGMYRCPNRSANRCSAKAISRKQTDATILYM 352 Query: 357 LLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTAIAEKIRLLDKELR 416 L C + + D ++L+L+ +LQ KI+ + ++T I EK+R + L Sbjct: 353 LAL-CDRFETENT--DTIDSLKLQREDLQRKISKMAELAIELDDMTIITEKLRDMKNALS 409 Query: 417 RASVSLKTL-KSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTC 470 + + ++ K + ID T+K G + L ++I+I+ + C Sbjct: 410 KLNHDIEEETKRIKAITTGSLKDIDRTTKEGMVETQLLIKGVLKEIVIDAAKRRC 464 >UniRef50_Q88NT6 Recombinase-related protein n=1 Tax=Pseudomonas putida KT2440 RepID=Q88NT6_PSEPK Length = 563 Score = 372 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 139/498 (27%), Positives = 221/498 (44%), Gaps = 30/498 (6%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYE--DLGLSAFKGKHA 58 M K +Y+RFSS Q +GDS RQ + + N D Y D G SAFKGKH Sbjct: 1 MSKVFSYIRFSSAKQSAGDSYARQVKAAKAFCDENGLEMADPREYLFFDKGRSAFKGKHL 60 Query: 59 Q-SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDN 117 +G + FL +E I PG+ L+VESLDRLSREKV +A+ R +L GI+V T D Sbjct: 61 DDTGELARFLSYVEDSTIPPGSYLVVESLDRLSREKVRDALPRFLDLLAKGINVYTSVDK 120 Query: 118 TVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRW 177 +Y D LI +I+ RA+EES +K RV +W++K++ A +G + P W Sbjct: 121 RLYTKDY--NELDLIISIISMSRAHEESAVKGGRVSSAWREKQKAARTTGKPLGKLRPLW 178 Query: 178 LSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESA----WG 233 L + +V +PD+ + IF L + IA LN + FS WG Sbjct: 179 LDVTPD--GYVLNPDKAAVVRRIFDLSTKGHGSRIIAATLNQEGIPAFSAGRKNFSGLWG 236 Query: 234 PSVIEKLLANKALIGICVPSYRARGKGISE---IAGYYPRVISDDLFYAVQEIRLAPFGI 290 S + +L ++ +G P GK + I Y+P V+++D FY Q R Sbjct: 237 FSTVRHILDSRTTLGEYQPHIFTDGKRTPDGDPIKDYFPSVVTEDEFYLAQAAR-TSRKT 295 Query: 291 SNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVD 350 + +K N+L ++ C CG+ M + G YY C CD I + Sbjct: 296 HSVTKATTNFNVLAGILNCYKCGSAMHLQGQRGRK--YYKCSKTTRGLCDAGIISAPRTE 353 Query: 351 YNIINELLFNCSKIQPVENK----KDANETLELKIIELQMKINNLIVALSVAPE------ 400 + E+L + V++ + + + +E +I L+ + ++ + + P Sbjct: 354 -QVFKEILTKVDSLSLVQDSSGSLQKSLQIVEGRIASLKARQDDAEASHAEFPSRITAKL 412 Query: 401 VTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEK 460 + + I L+ E + L + K + F F +DL S GR L + Sbjct: 413 LHELEADIGALESERTAIAEQLASDKVMSKHDF--FEKLDLVSFEGRVAANNLIKRLGLF 470 Query: 461 IIINTDNKTCDIYFMNGI 478 I + + +T + Y+++ Sbjct: 471 IFASKNGRTDETYWVSKN 488 >UniRef50_B8DJ05 Recombinase n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DJ05_DESVM Length = 590 Score = 362 bits (928), Expect = 2e-98, Method: Composition-based stats. Identities = 150/546 (27%), Positives = 242/546 (44%), Gaps = 48/546 (8%) Query: 5 IAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFS 64 +Y+RFSSP QM GDS RQ + + T++D G+SAFKGKH + GA Sbjct: 15 YSYIRFSSPEQMKGDSYRRQYEASQNYALEQGLDLDEEFTFKDEGVSAFKGKHTREGALG 74 Query: 65 EFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDS 124 +F++A++ G I PG+ L++E+LDRLSRE A L IL+ GI V+ L D+ +Y +S Sbjct: 75 KFIEAVDQGAIRPGSYLIIENLDRLSREDPHTAYRLLSGILSRGITVVALQDHQIYTPES 134 Query: 125 -LNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDK 183 N+ L+ ++L RA++ES +KS+R+ +W KR+DA G MT++CP+WL LD Sbjct: 135 YANDFTQLLVSLLTMHRAHQESVVKSNRLSKAWAHKREDARTQGKAMTSTCPQWLKLDKT 194 Query: 184 RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLAN 243 + DR + + IFK ++ + +A N + F G+ W S I+K+L N Sbjct: 195 TGRYTVLEDRAEVVRRIFKETLDGKGATMLASQFNVEGIPTF-GRAKGWWNSYIKKILTN 253 Query: 244 KALIGICVPS--YRARGKGI---SEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPM 298 +A+ G P + GK + + GYYP ++ + FY Q +RL I Sbjct: 254 EAVFGRLQPHTLKQVEGKRVPVGEPVDGYYPAIVDRETFYLAQAMRLGR-RIPGGRIVAR 312 Query: 299 LINLLRTVMKCEACGNTMIVHAVSGSLHG--YYVCP--MRRLHRCDRPSIKRDLVDYNII 354 NL ++KC CG TM G Y VC R++ C R + + +I+ Sbjct: 313 FSNLFTGLVKCGVCGATMAFDNKGTGRKGGTYLVCSEAKRKVGACQRHAWRYPQTQAHIL 372 Query: 355 --------NELLFNCSK--IQPVENKKDANETLELKIIELQMKINNLIVALSVAPE---- 400 LL + ++ + + E L + + K++N L P Sbjct: 373 LNLHRLDYRNLLPDIARQALDDANQLEQQLEALLAEHADTTTKVDNATDLLITNPNNLGL 432 Query: 401 ---VTAIAEKIRLLDKELRRASVSLKTLKSKGVNSF---------------SDFYAIDLT 442 T + K R L+ + A L+T + + + ++ Sbjct: 433 LRAQTRLETKQRELETRIAAAKNQLETARRRSQEAELVAGESDDAFKAFIKAEHEGEPEK 492 Query: 443 SKNGRELCRTLAYKTFEKIIINTDNKTCD-IYFMNGIVFKH---YPLMKVISAQQAISAL 498 R L + E+I + +K + + I FK +KV Q+A + Sbjct: 493 VYEMRRKMHQLLLRQLERITFHPASKPDSPFHGIIDITFKGTARLQRIKVEKGQRASTGY 552 Query: 499 KYMVDG 504 + DG Sbjct: 553 RVNEDG 558 >UniRef50_B3G100 Recombinase/resolvase n=1 Tax=Pseudomonas aeruginosa RepID=B3G100_PSEAE Length = 543 Score = 359 bits (920), Expect = 2e-97, Method: Composition-based stats. Identities = 146/508 (28%), Positives = 235/508 (46%), Gaps = 37/508 (7%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYE--DLGLSAFKGKHAQ 59 KA +Y+RFS+P Q GD RQ + E+ + + Y D G+SA++G + Sbjct: 19 PKAYSYVRFSTPEQAKGDGRRRQYKAAIEYADKHDLELVKDGNYAFLDAGVSAYRGNNIN 78 Query: 60 S--GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDN 117 + F + ++ G I PG+ LLVESLDRLSRE+V EA+ R +LN GI V+T D Sbjct: 79 RVSSSLGRFYEYVKEGKIEPGSYLLVESLDRLSREQVTEALVRFLDLLNSGIIVVTFGDG 138 Query: 118 TVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRW 177 TVY + EP L+ +I RA+ ES +K RV +W++K+ A G + A+CP+W Sbjct: 139 TVYKKSA--EPMQLVMSISHMSRAHSESSVKGQRVSDAWQQKQALARSEGVPLGAACPQW 196 Query: 178 LSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNF----SGKESAWG 233 LS D + A+ P+RV ++ +F+L ++ AI K N+ V F K WG Sbjct: 197 LSFDGE--AYKVIPERVCVVKRVFELTVQGYGQRAIVKIFNNEGVPVFGSEKRNKSGLWG 254 Query: 234 PSVIEKLLANKALIGICVPSYRARGKGI---SEIAGYYPRVISDDLFYAVQEIRLAPFGI 290 S I K+L N++++G P+ A G+ I +YP V+ ++L+YA E R + + Sbjct: 255 SSSIAKILGNRSVLGEYQPTVWAEGRRRISGEPIKDFYPAVVDEELYYAALEGR-SSRNV 313 Query: 291 SNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHG--YYVCPMRRLHRCDRPSIKRDL 348 S ++K N+ V +C C + M + G Y C C SI+ D Sbjct: 314 SRATKTSSNFNVWAKVAQCAYCKSPMHLVNKGKPPKGRKYLRCSRSTKGACINRSIRLDQ 373 Query: 349 VDYNIINELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVAL------------- 395 + + E+L +K+ KD + L +I+EL ++ + V L Sbjct: 374 SE-IVFKEIL---AKLNLASLIKDNAQVLRKRIVELDGRLESAKVKLLEVSNLLECHPSR 429 Query: 396 SVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAY 455 ++A + +I L+ E +L + N F +DL S GR L Sbjct: 430 TLAQTAVNVEGEITQLESERDECKATLASEHITDKNEL--FRRLDLDSYEGRFLANQQIQ 487 Query: 456 KTFEKIIINTDNKTCDIYFMNGIVFKHY 483 + ++++ D G + K + Sbjct: 488 RLKVRVLLKHDEIRVQYSVFVGDLPKFF 515 >UniRef50_Q30XM6 Putative uncharacterized protein n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30XM6_DESDG Length = 644 Score = 357 bits (916), Expect = 6e-97, Method: Composition-based stats. Identities = 136/469 (28%), Positives = 218/469 (46%), Gaps = 32/469 (6%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 KA +Y+RFS+P QM GDS RQ L + + N DT+T++DLG+SAF+GK+A+ G Sbjct: 49 PKAYSYLRFSTPDQMKGDSFRRQTELSRMYAEENGLDLDDTLTFQDLGVSAFRGKNAEEG 108 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F++A++ G + G+ LLVESLDRLSR+ +A + ILN G+ ++TL D VY+ Sbjct: 109 ELGAFIEAVDQGKVKRGSFLLVESLDRLSRQSPYKAFLQFSNILNRGLSIVTLQDGKVYS 168 Query: 122 IDSLNEPY---SLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWL 178 S L+ +I + QRA EES KS R+ WK KR+ A + +T+ CP WL Sbjct: 169 AGSNGNDLAFSDLMVSIAVMQRAYEESLTKSRRLSEVWKAKRRKAADGSLKLTSRCPEWL 228 Query: 179 SLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIE 238 LD K F +R ++ IF++ ++ IA N +K F G+ W S + Sbjct: 229 KLDKKNNTFHVIEERAAIVQRIFEMTLDGIGKRVIAATFNAEGIKPF-GRGKGWHYSYVT 287 Query: 239 KLLANKALIGICVPSYRARGKGI-------SEIAGYYPRVISDDLFYAVQEIRLAPFGIS 291 K+L N+A IG P +G I Y+P VIS++ F + +R I+ Sbjct: 288 KILENEATIGRYQPHKMQEVQGKRKRVPVGEPIENYFPAVISEETFLKAKRMRKER-KIA 346 Query: 292 NSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHG--YYVCPMRRLH-RCDRPSIKRDL 348 ++ NL + C CG M G Y VC R+ C R S + Sbjct: 347 GANVGNRYSNLFSGLAVCGVCGGVMHFENKGKPPKGGTYLVCSNARMKLGCKRYSWRYPQ 406 Query: 349 VDYNIINEL----------LFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVA 398 +I+ L + VE +D +E ++ + K+ L L Sbjct: 407 AQAHILMNLTELNYRELFPTLYEKSRESVERLQDKLLVMEERLKATEAKLERLTNILIER 466 Query: 399 PEVTAIAEKIRLLDKE-------LRRASVSLKTLKSKGVNSFSDFYAID 440 P + + ++ L++E + +A+ L + + + ++ ++ Sbjct: 467 PHSSTLLTRLDALEEEKQGLIVGIEKAARDLSEEQERVEGAGKEYEELE 515 >UniRef50_C7HJH4 Resolvase domain protein n=1 Tax=Clostridium thermocellum DSM 2360 RepID=C7HJH4_CLOTM Length = 383 Score = 356 bits (914), Expect = 1e-96, Method: Composition-based stats. Identities = 136/370 (36%), Positives = 186/370 (50%), Gaps = 14/370 (3%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 KA +Y+RFSSP Q GDSL RQ +L E+ K + DT+ D GLSAFKG H G Sbjct: 3 PKAYSYIRFSSPEQEKGDSLRRQIQLSEEYCKQHGLILDDTLKLTDRGLSAFKGIHRTKG 62 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 A EFL +E G I PG+ LLVE+LDRLSRE++ +A+ + I+ GI ++TL D Y+ Sbjct: 63 ALGEFLRLVEEGKIPPGSVLLVENLDRLSREQILDALNQFTSIIKAGIKIVTLQDGMEYD 122 Query: 122 IDSLNEPY-SLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 +S+N+ + LI +I RA++ESE KS R+ W+ KR A G +TA P WL L Sbjct: 123 QESINQNWAQLIISITYMARAHDESETKSKRISAVWENKRSKAGNGGEKLTAKAPAWLKL 182 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLND-----HAVKNFSGKESAWGPS 235 RT F+ P+ K IELIF+ ++ + IA+ LN+ + K W S Sbjct: 183 SQDRTKFILIPEAAKAIELIFRKKLAGKGAERIARELNEDPNIWEPPRTGPKKTGGWRGS 242 Query: 236 VIEKLLANKALIGICVPSYRARGKGIS---EIAGYYPRVISDDLFYAVQEIRLAPFGISN 292 I K+L ++A+IG P GK I Y+P VI +LFY VQ A Sbjct: 243 YINKILRSRAVIGEFQPHKLVDGKRQPIGDPIPDYFPPVIDKELFYQVQAQLQANAEKKG 302 Query: 293 --SSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHG--YYVC-PMRRLHRCDRPSIKRD 347 + + NL V+KC CG M G Y VC RRL C I+ + Sbjct: 303 NAGGRTGKVSNLFTHVIKCGLCGYPMHFINKGKPPKGGKYLVCDASRRLKTCTAKPIRYE 362 Query: 348 LVDYNIINEL 357 + + Sbjct: 363 EFEQLFFDNF 372 >UniRef50_A6T2W2 Site-specific recombinase n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T2W2_JANMA Length = 616 Score = 354 bits (908), Expect = 5e-96, Method: Composition-based stats. Identities = 142/520 (27%), Positives = 244/520 (46%), Gaps = 32/520 (6%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 M A +Y+RFS+P Q+ GDSL RQ L + + + T+ +DLGLSAF + + Sbjct: 1 MPIAYSYIRFSTPEQLKGDSLRRQTELSEAYAEKHGLQLDTTLKLQDLGLSAFDRSNVEK 60 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 GA FL AIE G I PG+ L+VESLDRLSR +V +A+E I+ GI ++TL D Y Sbjct: 61 GALGAFLKAIEQGRIKPGSFLIVESLDRLSRAQVTDALEVFLSIIRKGITIVTLNDGYEY 120 Query: 121 NIDSLNEP-YSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 + ++ E Y L+ +I I QRA EESE K+ R++ +W K +A + +TA C W+ Sbjct: 121 STQTMRENSYKLLISITIMQRAFEESETKAKRLRAAWINKANNA--NVRKITARCGGWMK 178 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEK 239 L D R+ F P RV+ + I ++ ++ + IAK LND V +++G + W S + K Sbjct: 179 LSDDRSEFEFIPGRVEIVREIIQMSLDGMGQSVIAKRLNDRGVVSWTG-ANGWHTSTLAK 237 Query: 240 LLANKALIGICVPSYRARGK---GISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKN 296 +L N AL G P + GK + Y+P +++++ F +++ R + Sbjct: 238 ILNNPALYGAFQPHIKTDGKLLPHGDPVKDYFPALMTEEQFLILKKTRSERLFAGTGRRR 297 Query: 297 PMLINLLRTVMKCEACGNTMI-------VHAVSGSLHGY----YVC-PMRRLHRCDRPSI 344 + NLL + C CG +M+ V+ GS VC RR +C Sbjct: 298 NHVPNLLSGIAVCGYCGGSMVLMGNTTLVNKPDGSTERINKKSLVCDNGRRGFKCWALRW 357 Query: 345 KRDLVDYN------------IINELLFNCSKIQPVENKKDANETLELKIIELQMKINNLI 392 K + + + ++NE+ S +E D K+ +L K+ N+I Sbjct: 358 KYEHFETSFLTSCRLIDLNLMLNEVEAGTSLQSDIERLNDQITLQTSKLEDLGKKVTNII 417 Query: 393 VALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRT 452 A+ + ++++ +++E+ L+ + ++ D + +E Sbjct: 418 EAIEDGLASQTLKDRLQSIEQEISAGLDQKAILEKQLTDATFTSKTADQNIETMQEAIDR 477 Query: 453 LAYKTFEKIIINTDNKTCDIYFMNGIVFKHYPLMKVISAQ 492 ++ E++ + I V + +P+ ++ A+ Sbjct: 478 ISQLEGEELFVFRSKLAEAIRKTIKQV-RLFPVGRLTPAE 516 >UniRef50_Q1QRV3 Recombinase n=1 Tax=Nitrobacter hamburgensis X14 RepID=Q1QRV3_NITHX Length = 565 Score = 350 bits (897), Expect = 8e-95, Method: Composition-based stats. Identities = 130/438 (29%), Positives = 216/438 (49%), Gaps = 23/438 (5%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 +KK +Y+RFS+P Q GDSL RQ +W +++ DLG+SA+ G + + Sbjct: 6 LKKVYSYIRFSTPEQAKGDSLRRQIDNARQWCSERGLVMDESL--RDLGISAYTGTNRTT 63 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 GA FLD +E G I G+ LLVESLDRLSRE V +A RL ++ GI ++TL D Y Sbjct: 64 GALRSFLDLVESGKIPKGSILLVESLDRLSREAVIDAASRLFDLIRSGITIVTLVDGQEY 123 Query: 121 NIDSLNEPYS-LIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 + + LN +S LI +I + RA+EES K RV +W KK+Q A E G +T CP W+ Sbjct: 124 SAERLNNDWSPLIVSIAVMARAHEESRTKGKRVGEAWAKKKQAAREEGRPLTRRCPAWIQ 183 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNF----SGKESAWGPS 235 + +K+ + P++ + ++ IF++ +E I K LN + F + + W S Sbjct: 184 IANKK--YEVIPEKAQIVQRIFRMAIEGHGSRTILKALNSDGIPTFMVSKKKQNNGWQTS 241 Query: 236 VIEKLLANKALIGICVPS---YRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISN 292 + +LL ++ ++G P + AR + G+YP +I + F+ Q + G Sbjct: 242 SLRRLLTSRTVLGEYQPHVGRHWARKPEGDPVKGFYPAIIDEATFWRAQSAMESRRGRG- 300 Query: 293 SSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHG--YYVCP-MRRLHRCDRP-SIKRDL 348 K + +LL+ + KC CG+ M + G Y+ C RR C + D Sbjct: 301 GRKGEGVAHLLQGLAKCGDCGSAMHIINKGPLPKGGTYFECSAARRKFECSNTERWRVDR 360 Query: 349 VDYNIINELLF-NCSKIQPVENKK---DANETLELKIIELQMKINNLIVALSVAPEVTAI 404 ++ ++ L + + + E + D + L+ K+ + + + LIV + + A Sbjct: 361 IEARLLKALTYIDVDAVVFGEQRDEVSDKVDILQAKLADAEQRRKRLIVLVESGDD--AA 418 Query: 405 AEKIRLLDKELRRASVSL 422 AE+ + + E++ L Sbjct: 419 AERFQTVAAEVKHIKGEL 436 >UniRef50_Q2YCV5 Recombinase n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YCV5_NITMU Length = 544 Score = 348 bits (892), Expect = 4e-94, Method: Composition-based stats. Identities = 145/502 (28%), Positives = 221/502 (44%), Gaps = 42/502 (8%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTIT---YEDLGLSAFKGKH 57 M+KA +Y+R S+ Q+SGDSL RQR ++ K + ++T+ D+G+S FKG + Sbjct: 1 MRKAYSYIRMSTDKQLSGDSLRRQREASEKYAKAHGLELIETLDGKDLRDIGVSGFKGAN 60 Query: 58 AQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDN 117 ++ G S FL+ + G I + LL+ES DRLSR V +A ILN GI++ITL DN Sbjct: 61 SRRGVLSVFLEHLNDGKIDANSILLIESFDRLSRADVLDAFSLFTNILNKGIEIITLSDN 120 Query: 118 TVYNIDSLN-EPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPR 176 Y DS+ P L I I RANEES KS R W KR +A +T+ CP Sbjct: 121 QRYTRDSVRVNPGQLFLTIGIMTRANEESVTKSKRGLSVWNNKRDNA--QKKPITSRCPA 178 Query: 177 WLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSV 236 WL+ + F +R + + LIF+L + +I++YLN H + F G W S Sbjct: 179 WLTYSSESEKFEVIEERARVVRLIFELCAKTSGTWSISRYLNRHNIPVF-GDAQFWQKSY 237 Query: 237 IEKLLANKALIGICVPSYRARGKGIS---EIAGYYPRVISDDLFYAVQEIRLAPFGISNS 293 + K+L+N+A++G P+ R G+ I I YYP +IS F+ R + Sbjct: 238 VNKILSNRAVLGEFQPNSRESGQRIPVGKVIENYYPAIISATEFHLAWAARDRRNKTGSG 297 Query: 294 SKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHG--YYVCPMRRLH-RCDRPSIKRDLVD 350 K NL ++ C CG+ M V G + VC C+ K LV+ Sbjct: 298 RKGINFSNLFSGLVYCGNCGSKMSVRNRGVPPKGGKWLVCQNHLAGAGCEMREWKLPLVE 357 Query: 351 YNIINELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTAIAE---- 406 I L + K A +E ++ LQ++ L + A E++A E Sbjct: 358 DAIFKHLYE--VDFSELLGNKSAGFDIEKELFALQVEQKELESKMDQAIEMSAAQELNEQ 415 Query: 407 -------KIRLLDKELRRASVSLKTLKSKGVNSFSDFYAI---------------DLTSK 444 I L+ ++ + + K K + F ++ + Sbjct: 416 SRFRYVKLINQLESDINEKKKCISS-KEKELEVFKSQQSLLHTKELKETLLLLEKNKDDY 474 Query: 445 NGRELCRTLAYKTFEKIIINTD 466 R L +T +I + TD Sbjct: 475 YFRSSVNQLLTRTIARIDLITD 496 >UniRef50_Q46W15 Recombinase n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46W15_RALEJ Length = 589 Score = 344 bits (882), Expect = 5e-93, Method: Composition-based stats. Identities = 134/493 (27%), Positives = 222/493 (45%), Gaps = 26/493 (5%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYE--DLGLSAFKGKHA 58 M +A Y RFS P Q G S RQ L ++ +V+ + Y D G SAF G H Sbjct: 1 MPRAYNYTRFSHPSQALGQSEQRQIELCEQYCRVHGLTLVRDSEYTFLDRGRSAFLGAHL 60 Query: 59 QSGA-FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDN 117 GA S FL +E G I G+ L+ ESLDRLSR+ A++ L I+ GI V+TL + Sbjct: 61 DDGAELSRFLKLVEDGTIPAGSWLICESLDRLSRQDSWTAMKLLGGIVESGITVVTLNNG 120 Query: 118 TVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRW 177 V+ + + LI A+L + RAN ES KSSR++ +++KKR A + + T P W Sbjct: 121 EVFA--DMKDARKLIMAVLDSSRANSESSHKSSRLRQAYQKKRDAASDGKAVFTKQVPMW 178 Query: 178 LSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVI 237 L L R+ + P+ V+T+ +IF L + N +A+ LN+ F + WG S + Sbjct: 179 LKLKADRSGYDLVPEFVETVRMIFDLTI-THGKNKVAQLLNEAGRPTFKPSVNGWGTSAV 237 Query: 238 EKLLANKALIGICV-------PSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGI 290 +L N+A++G P R R I Y+P +I + +Y Q+ +A Sbjct: 238 SHVLNNRAVLGEFQPMSKLDDPKRRKRKPVGEPIKKYFPAIIDETTYYRAQDA-VAGRRT 296 Query: 291 SNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHG--YYVCPMRRLHRCDRPSIKRDL 348 + ++K + N+ + V +C CG+ M + + G Y C + R C+ + R Sbjct: 297 AKATKQSVKFNVWQKVARCIHCGSPMHMVNKGRAPKGQTYIECSIGRKGLCESHKLIRLD 356 Query: 349 VDYNIINELLFNCSKIQPVENK----KDANETLELKIIELQMKINNLIVALSV--APEVT 402 + +L + V + + +I E + K++ + A +P++ Sbjct: 357 HSEQVFRAILACLDSMSLVRDSGGKLAKDLAAINGRIAEQEAKLSKAVAAFDAEPSPDIA 416 Query: 403 AIAEKIRLLDKEL-RRASVSLKTLKSKGVNSFSDFY-AIDLTSKNGRELCRTLAYKTFEK 460 A ++R EL + + L ++ + +F +DL S GR L + K Sbjct: 417 AAVRRMRETLTELTNQREHTQGELAAEDAIDYKEFMRRLDLESPEGRAAANALLQRL--K 474 Query: 461 IIINTDNKTCDIY 473 +++ D Sbjct: 475 VLVFADRGEDARN 487 >UniRef50_Q2BR60 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BR60_9GAMM Length = 544 Score = 333 bits (853), Expect = 1e-89, Method: Composition-based stats. Identities = 142/506 (28%), Positives = 221/506 (43%), Gaps = 44/506 (8%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 KA +Y+RFS Q GDSL RQ I + N+ L T T+EDLG+SA+KG +A +GA Sbjct: 2 KAYSYIRFSKQSQAQGDSLRRQTEAIRSYCTKNN-LTLSTQTFEDLGISAWKGANADTGA 60 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F+ E G I +LLVE+LDRLSRE V +A L +L+ + +ITL D VY+ Sbjct: 61 LGAFIKGCESGAIQTPCSLLVENLDRLSREHVRKAFGLLLQLLDLDVTIITLMDEKVYSP 120 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 D + L+ A+ R EES+ KS RV+ + + KR+ L T +CP+WL L+ Sbjct: 121 DC--DQMDLMVALTYMSRGAEESQTKSDRVRKAKQAKREKTLAGEVKFTGNCPKWLKLNK 178 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNF----------------S 226 F P+ V+T++ I+ +R + + I K LN+ ++ F + Sbjct: 179 DTQTFEEIPEFVETLKRIYDMRSKGYGIVKILKTLNEEGIRAFGLKIVKDENGEPVKDKT 238 Query: 227 GK----ESAWGPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQE 282 GK S W + + L ++A+IG R G I Y+P VI +LFY VQ+ Sbjct: 239 GKVKKVPSKWSQTTVVNYLKSRAVIGEYQLKERGVPVG-DPITDYFPTVIDPELFYRVQD 297 Query: 283 IRLAPFGISNSSKNPMLINLLRTVMKCEACGNTM---IVHAVSGSLHG---YYVC--PMR 334 F + N L ++ C CG + V G H Y C Sbjct: 298 ----TFTKVTKGRTTTFRNALTGLLSCHVCGGPIKFDHVPPKKGRKHAPNQYLRCKSTYE 353 Query: 335 RLHRCDRPSIKRDLVDYNIINELLF-NCSKIQPVENKKDANETLELK--IIELQMKINNL 391 R C + I V ++I + N +KI + + + EL+ I+ + K+NNL Sbjct: 354 RKTTCFKGMINYSGVLSSVIAMTAYLNFNKINSEDYEALTAKLAELETNRIDTEAKLNNL 413 Query: 392 IVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSK-----GVNSFSDFYAIDLTSKNG 446 + + L L + + K+K + ++DL S+ G Sbjct: 414 SAVIQAGVTAPNFVKDANRLSSSLDEIKTDIDSTKAKLSSVEPSEAMKSIDSLDLESEQG 473 Query: 447 RELCRTLAYKTFEKIIINTDNKTCDI 472 R + +KI + ++ Sbjct: 474 RRDLNLFLKQYIKKIEVTKNDVYVTF 499 >UniRef50_Q87J19 Putative site-specific recombinase n=1 Tax=Vibrio parahaemolyticus RepID=Q87J19_VIBPA Length = 575 Score = 332 bits (850), Expect = 3e-89, Method: Composition-based stats. Identities = 126/511 (24%), Positives = 236/511 (46%), Gaps = 29/511 (5%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 K A +Y R S+ Q+ G RQR I + + + L T+ DLG+SA+KG +A +G Sbjct: 3 KIAYSYTRLSTEKQIKGHGFTRQREAIEKVCCQHG-WQLSDQTFNDLGVSAWKGANATTG 61 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 A S+F+D + G I P + L+VES+DRLSR++V +++ + +L G+ + TL D+ +Y Sbjct: 62 ALSQFIDLAKKGAIRPNSVLIVESVDRLSRQQVDKSLRLMLELLEVGVSIFTLSDSKLYT 121 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 +S + L+ ++ AQRA+EESEIKS RV+ + KKK ++ + G I+T CP WL++ Sbjct: 122 TNSDSVMLDLMMWLMTAQRAHEESEIKSLRVRAA-KKKNKELIRKGIIVTRKCPEWLTVS 180 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 D ++ F+ + +R + + IF + S IA LN+ + + GK S W I LL Sbjct: 181 DDKSCFLVNNERAEIVRKIFTWYSQGFSTKPIALKLNELGIPYW-GKSSTWSYRHIRSLL 239 Query: 242 ANKALIGICVPSYRARGKGI---SEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPM 298 ++ +IG R G+ + + YYP +I L+ Q+I+ + Sbjct: 240 KHRGVIGEIQLLKRIDGRDVADGDPVEDYYPAIIDRGLWATCQQIKSSKTTAKGRVVERG 299 Query: 299 LINLLRTVMKCEACGNTMIVH--AVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINE 356 + NL R ++KC CG+ + ++ V G + + C + C + + + ++ Sbjct: 300 MANLFRGLLKC-ECGSGLAINSSTVKGRTYRFLRCSQLKTTGCQAKNWHYEKTERILLIA 358 Query: 357 LLFNCSKIQPVENKKDANE------TLELKIIELQMKINNLIVALSVAPE------VTAI 404 L + S ++ E + ++ E + + N I L P + + Sbjct: 359 LRHSLSSFSEEDHAVSLRECQHYLARISEELKEKERQAENAINYLLDKPSKLLEARLQTL 418 Query: 405 AEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDL------TSKNGRELCRTLAYKTF 458 + I L +A L+ + + + + + R L + Sbjct: 419 EDDIARLKAIQEQAEHRLEAVHYEKSTALDKVEELQRVLEDIANDDDSRHKANGLLRRLI 478 Query: 459 EKIIIN--TDNKTCDIYFMNGIVFKHYPLMK 487 + I + ++ ++ + ++G + ++K Sbjct: 479 DTITLGSISNPRSKEFMEVSGNDYHGLIIIK 509 >UniRef50_Q1V893 Putative uncharacterized protein n=1 Tax=Vibrio alginolyticus 12G01 RepID=Q1V893_VIBAL Length = 550 Score = 330 bits (847), Expect = 6e-89, Method: Composition-based stats. Identities = 119/442 (26%), Positives = 217/442 (49%), Gaps = 20/442 (4%) Query: 4 AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAF 63 A +Y+RFSS Q GDS RQ ++ + L T DLGLSA+ G H + GA Sbjct: 6 AYSYVRFSSLEQAKGDSFRRQTEAAQKYC-YEQNLELADFTLRDLGLSAYHGNHVKEGAL 64 Query: 64 SEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNID 123 EF++A++ G I G+ LLVES+DRLSRE++ A++R +L GI+++TL DN V+ ++ Sbjct: 65 GEFINAVQQGQIPKGSYLLVESMDRLSRERISIALQRFMHLLELGINIVTLQDNRVFTVE 124 Query: 124 SLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDK 183 SL+ L+ ++++ RA+EESE KS R++ + K+KR+ A E+ + P W+ L Sbjct: 125 SLDNIGDLMMSLVLMMRAHEESETKSKRLREAHKEKRRLARENLKPTRYNNPHWIKLTS- 183 Query: 184 RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLAN 243 + P+RV I+ IF++ + +I + N+ ++ + ++ W + I+K+L Sbjct: 184 -NGYELIPERVAIIKRIFQMTINGMGATSIHRRFNEEGLEPWGRSKTGWHSTYIKKILRA 242 Query: 244 KALIGICVPSYRARGKGISE---IAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLI 300 + ++G P GK + + I G+YP+ I F Q + ++ + ++ Sbjct: 243 RTVLGEYQPHRNEGGKRVEDGDPILGFYPQAIDVSTFKKAQLAIASRTNKTSGIRKSLIN 302 Query: 301 NLLRTVMKCEACGNTM--IVHAVSGSLHGYYVCPMRRLH------RCDRPSIKRDLVDYN 352 NL +KC+ CG +M + Y VC + +C S++ +V+ Sbjct: 303 NLFTGFVKCKNCGASMNYVDKGRGSKGGQYLVCSRAKKKTHYDGIKCQYASMRYVVVEAA 362 Query: 353 IINELLFNCSKIQPVENKKDANETLE------LKIIELQMKINNLIVALSVAPEVTAIAE 406 I+N K+ N+++ + E + + ++ I L+ L + A+ Sbjct: 363 ILNVAATLDLKLHSSPNQEELSRARERFDSIYREKVAVEESIARLVDYLDSSSGSKALLT 422 Query: 407 KIRLLDKELRRASVSLKTLKSK 428 K+ + +L+ L+ + Sbjct: 423 KLDQREAQLKELEKQSSILEKQ 444 >UniRef50_Q98DK0 Site-specific recombinase n=1 Tax=Mesorhizobium loti RepID=Q98DK0_RHILO Length = 578 Score = 328 bits (840), Expect = 4e-88, Method: Composition-based stats. Identities = 127/479 (26%), Positives = 212/479 (44%), Gaps = 29/479 (6%) Query: 11 SSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFSEFLDAI 70 S+ Q+ GDSL RQ ++ + ++ ED+G+SAFKG + +G +FL+A+ Sbjct: 2 STDIQLKGDSLRRQTERSKQYADDHDLQLVEDFRLEDIGVSAFKGDNLSTGELGKFLEAV 61 Query: 71 EHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDSLNEPYS 130 + G I G+ LLVES DRLSR+K+ A+ I ++GI+++TL DN +Y E Sbjct: 62 KAGRIPKGSYLLVESFDRLSRQKLSAAVPLFFDITSNGINLVTLSDNQLYKAGEA-EFAQ 120 Query: 131 LIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDKRTAFVPD 190 LI +I + RANEESEIKS R+ +W KR+ + +T CP WL L D R F Sbjct: 121 LIISIAMMARANEESEIKSQRLSAAWDAKRRAIDD--KKLTGLCPAWLELSDDRKNFGVL 178 Query: 191 PDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLANKALIGIC 250 DR + + IF+ + I + LND F G+ + W S + K+L +A++G Sbjct: 179 EDRAQIVRRIFEDSASGQGSFVITRRLNDLGTHAF-GRSNGWVQSYVTKILQTRAVLGEF 237 Query: 251 VPSYRARGKGIS---EIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVM 307 P + GK I I GYYP+++ ++LF Q R K L NL + Sbjct: 238 QPHTKQNGKRIPFGDPIPGYYPKIVDEELFLRAQFARGKRRIEGGGRKGEALRNLFTHLA 297 Query: 308 KCEACGNTMIVHAVSGSLHG--YYVCPMRRLH-RCDRPSIKRDLVDYNI--------INE 356 KC CG+ M G Y C C + + + + E Sbjct: 298 KCGYCGSPMHFLNKGFGPGGGTYLKCSQALRGLDCVSTPWRYQDFERSFFLYVKEIDLGE 357 Query: 357 LLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTAIAEKIRLLDK--- 413 +L + D +L+ K +L+++ ++ A + ++ K++ + Sbjct: 358 MLAASATKSDAIALDDRLTSLKEKRNQLEVQRERSYALINQAISIDFVSAKLKECESDLA 417 Query: 414 ----ELRRASVSLKTLKSKGVNSFSDFYAI--DLTSKNG--RELCRTLAYKTFEKIIIN 464 ++ + L ++ + S + + + L G RT+ +I+ + Sbjct: 418 GVDVQISEVELQLSAIREQQSISPDELHRLIDQLQVTEGPDAFAQRTMLAGRLREIVSD 476 >UniRef50_A5L3F9 Putative uncharacterized protein n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5L3F9_9GAMM Length = 542 Score = 327 bits (838), Expect = 7e-88, Method: Composition-based stats. Identities = 128/453 (28%), Positives = 209/453 (46%), Gaps = 18/453 (3%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 M +A +Y+RFS+P Q GDS RQ E+ L Y+DLG+S FKG + +S Sbjct: 1 MIRAYSYIRFSTPEQFKGDSFRRQTAQAKEYADSKG-LLLQDFFYKDLGVSGFKGANLKS 59 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 GA +F + + G + + LL+E+ DR SR +A+ + +L+ GI ++TL D +Y Sbjct: 60 GALGKFKEQVRKGVVPKDSWLLIEAWDRFSRMHPKDALREMLELLSLGITIVTLIDGAIY 119 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 D L + +L+ +++ RA+EES KS RV+ + KK+R+ A E G T CP W+ L Sbjct: 120 KEDEL-DTMNLLVCLMLMSRAHEESATKSKRVESAAKKRREKAREEGARFTKICPLWIEL 178 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 + F + KT+ IFK +E AI++ L + + FS W S +EK+ Sbjct: 179 SEDEKNFSLIESKAKTVRDIFKWSIEGLGRIAISRRLVEQGIAPFSKTARTWHTSYVEKI 238 Query: 241 LANKALIGICVPSYRARGKGI---SEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNP 297 L N A G + K + I Y+P I D F A Q N + Sbjct: 239 LKNPAAYGAIQFHTGSGTKRVPDGEPIENYFPAAIDKDTFLAAQYKSSERRISPNKTTYR 298 Query: 298 MLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHR-CDRPSIKRDLVDYNIINE 356 L ++ C CG+ M+ + +G YY C + R C R + K+ D +++ Sbjct: 299 GKAKLFSELLYCS-CGDKMM-YVNNGRGLVYYKCFNVKEKRGCTRRNFKQGNTDELLVSA 356 Query: 357 LLFNCSKIQPVENKKDANETLEL-----KIIELQMKINNLIVALSVAP-----EVTAIAE 406 L S++ + ++ + ++EL ++ E+Q KI+ + L P E Sbjct: 357 LFQFGSRLLAKDTQEAYDFSVELSSIKGQLEEVQNKISVAVEHLLTNPSPAISNRLRELE 416 Query: 407 KIRLLDKELRRASVSLKTLKSKGVNSFSDFYAI 439 KE +A ++ L++ NS + I Sbjct: 417 SEESELKENIKAKEAMSALQAVHTNSAQELEDI 449 >UniRef50_B9M114 Recombinase n=1 Tax=Geobacter sp. FRC-32 RepID=B9M114_GEOSF Length = 613 Score = 327 bits (837), Expect = 9e-88, Method: Composition-based stats. Identities = 141/533 (26%), Positives = 230/533 (43%), Gaps = 45/533 (8%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 + +Y+RFS+ Q+ G SL RQ + + +++T +DLGLSAF GKH G Sbjct: 8 PRCYSYIRFSTLEQLKGYSLARQMEKSRLYAQEKGLVLDESLTLKDLGLSAFSGKHRTRG 67 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 A EFL+ + G I + LLVESLDRLSR+K+ A ++L+ I ++GI V+TL D + Y Sbjct: 68 ALGEFLELAKRGKIPKNSILLVESLDRLSRQKIMTAFDQLREITSYGIIVVTLIDRSEYR 127 Query: 122 IDSLNEPYS-LIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 ++ N+ S + ++ I R+ +ES KS R +WK KR++ E +TA P WL L Sbjct: 128 HETWNDNISQVFTSLGIMARSYDESLTKSIRHIDNWKAKRENIAE--KKLTARAPAWLKL 185 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 D+ + F RV + IF + ++ +IAK LN + + G ++ W PS ++K+ Sbjct: 186 DESKIKFNGIEYRVAIVRRIFNMALQGIGAASIAKKLNTEKIPAWKG-DNGWFPSYVKKI 244 Query: 241 LANKALIGICVPSY---------RARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGIS 291 L NKA++G P + R + YYPR+I+D++FY VQE Sbjct: 245 LHNKAVLGEFEPHIMVTDEEAGEKVRKPTGEVFSDYYPRIIADEVFYRVQE--RCKSNKD 302 Query: 292 NSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHG--YYVC-PMRRLHRCDRPSIKRDL 348 KN L NL + KC CG M Y VC RR C+ S + Sbjct: 303 FGGKNGKLSNLFGGLAKCGYCGKPMQFVNKGNQTKAGMYLVCDNARRKMGCEYHSFRYPE 362 Query: 349 VDYNIINELL-FNCSKIQPVENKKDANET---------LELKIIELQMKINNLIVALSVA 398 + ++ N + + + + ++ + + +L+ +IN L LS A Sbjct: 363 FEDAFLSFCSGLNIADLLTDDAIQKESKIAGLQGRLAVINDEFKQLERRINVLYETLSQA 422 Query: 399 ----------PEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAI-DLTSKNGR 447 E+ + + + E + + L K + +L G Sbjct: 423 ENQAVRDRTMAEINKLVTRQTAIPAERSIINQEINQLSHKQTTIEQSIQGLKELYQFIGS 482 Query: 448 ELCRTLA------YKTFEKIIINTDNKTCDIYFMNGIVFKHYPLMKVISAQQA 494 +++ D N + Y + +AQ+A Sbjct: 483 VPAEQAIDVRMKLRGEIRQLVERIDVYPVGYMPSNSTINTAYEMEVDFAAQKA 535 >UniRef50_Q3J212 Putative site-specific recombinase n=1 Tax=Rhodobacter sphaeroides 2.4.1 RepID=Q3J212_RHOS4 Length = 509 Score = 322 bits (824), Expect = 3e-86, Method: Composition-based stats. Identities = 128/432 (29%), Positives = 201/432 (46%), Gaps = 21/432 (4%) Query: 11 SSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFSEFLDAI 70 SS Q+ GDS RQ A++ + +D DLG+SAFK + +GA F+ Sbjct: 2 SSAIQIKGDSFRRQAEASAKYAAEHDLDLIDDYKLADLGVSAFKSDNLTTGALGRFVAEC 61 Query: 71 EHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDSLNEPYS 130 E G I G+ LL+ESLDRLSR+K+ +A IL G+ ++TL D VY+ S ++ S Sbjct: 62 EAGEIEAGSFLLIESLDRLSRDKILDAFSLFARILKTGVKIVTLSDGQVYD-GSSDQVGS 120 Query: 131 LIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDKRTAFVPD 190 + AI + R+N+ES+IKS+R +W +KR+ A E G M++ CP WL L R +++ D Sbjct: 121 IYYAISVMIRSNDESKIKSTRGLANWSQKRKLAAEHGVKMSSQCPAWLKLSVDRKSYLID 180 Query: 191 PDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLANKALIGIC 250 +R K ++ IF+ + N I K LN V F G+ + W + + K L N+A++G Sbjct: 181 KERAKIVQRIFEASASGKGANLITKELNRDKVPTF-GRGALWAEAFVSKTLRNRAVLGEF 239 Query: 251 VPSYRARGKGIS---EIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVM 307 P GK I GY+P VI ++LF VQ ++ + N+ V Sbjct: 240 QPGQYVSGKRQPAGDPIPGYFPPVIEEELFDIVQASLRGRL-LAGGRRGEGQSNIFTHVA 298 Query: 308 KCEACGNTMIVHAVSGS-----LHGYYVCPMRRLH-RCDRPSIKRDLVDYNI-------- 353 C CG+ M + H Y C R CD + + + Sbjct: 299 FCGYCGSKMRHRSKGSRVKGNPPHRYLTCFNRFNGPGCDCKPLPYAAFERSFLTFVRDVD 358 Query: 354 INELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTAI-AEKIRLLD 412 + LL + + D E K+ + +I + ++ + AP++ I E+IR L Sbjct: 359 LRGLLEGAKRKSEAKTIADRITVNEEKVRKADERIRDYLIKIEGAPDLAEIFMERIRELK 418 Query: 413 KELRRASVSLKT 424 E S++ Sbjct: 419 AEKDDLVRSIEE 430 >UniRef50_D0XHM7 Putative uncharacterized protein n=1 Tax=Vibrio harveyi 1DA3 RepID=D0XHM7_VIBHA Length = 515 Score = 321 bits (822), Expect = 4e-86, Method: Composition-based stats. Identities = 146/524 (27%), Positives = 239/524 (45%), Gaps = 48/524 (9%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 MK I Y RFSS GQ GDSL RQ RL EW K N+ ++ Y D G+S FKGKHA Sbjct: 1 MKNVILYERFSSLGQKKGDSLVRQSRLCDEWCKKNNGKLINA--YVDEGVSGFKGKHAAV 58 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 GA S+ L AIE+GYI T LL+E+LDRLSRE++ A++R IL GI+++TL D V+ Sbjct: 59 GALSKILSAIENGYIERDTYLLIENLDRLSREEISTALDRFSSILRAGINIVTLMDGKVF 118 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 +S N L+ A++ RANEES KS R W KR+ +E G P WL Sbjct: 119 TPESANNLPDLMWALMTMARANEESATKSKRASSVWLSKRK-FVEGGGKPKFKTPNWLDY 177 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 D+K+ + + ++ LIF+L ++ +S+N +A LN+ G W S + + Sbjct: 178 DEKKQEYKLN-KHAASVALIFELYLKGKSINRVAMDLNELKTPPI-GYSKKWSHSTVRWI 235 Query: 241 LANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLI 300 L +K G+ + +YP IS + FY Q + ++N Sbjct: 236 LDSKQTYGVLDAKTMYQ-------DDFYPAAISKETFYKAQSELNRRKNKTGRTRNDKTP 288 Query: 301 NLLRTVMKCEACGNTMIVHAV------SGSLHGYYVCPMRRL----HRCDRPSIKRDLVD 350 NLL + C CG ++ + Y +C +R C P+ + V+ Sbjct: 289 NLLTGLACCGVCGESITMQGKNHSSTGKAGNFKYLMCSTKRYSHVESHCGLPNFRYKYVE 348 Query: 351 YNIINELLFNCSKIQPVENKKDA-------NETLELKIIELQMKINNLIVAL--SVAPEV 401 I+ +L + + + KD E++ ++ +++ +I+NLI AL S + + Sbjct: 349 M-ILAVILSSIDTLPKSRDDKDNIVRIKTEIESIGEELEDIEKQIDNLIEALAVSKSDRI 407 Query: 402 TAIAEKIRLLDKELRRASVSLK--------TLKSKGVNSFSDFYAIDLTSKNGRELCRTL 453 A ++ + EL+R +L+ + ++++ + R ++ Sbjct: 408 AAKLAQLEQNEAELKRNREALEVQYNEITLIEDDEKFEQRIRKLSVNIQNDEYRRELLSV 467 Query: 454 AYKTFEK--------IIINTDNKTCDIYFMNGIVFKHYPLMKVI 489 YK ++ I + ++ + G V +P K++ Sbjct: 468 LYKVIDEWRFNADGSISVQVSGNKINVSGVKGNVEISFPDRKIM 511 >UniRef50_A9W3Z8 Recombinase n=1 Tax=Methylobacterium extorquens PA1 RepID=A9W3Z8_METEP Length = 585 Score = 320 bits (820), Expect = 9e-86, Method: Composition-based stats. Identities = 125/440 (28%), Positives = 199/440 (45%), Gaps = 21/440 (4%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 M K +Y+RFS P QM GDSL RQ +W N +++T DLG+SA++G + Sbjct: 11 MPKCYSYIRFSRPEQMRGDSLRRQTEAAEKWAAENGMVIDESLT--DLGVSAYRGLNRLK 68 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 GA +FL+ + G + G+ L++ESLDR SRE + I +L G+ ++TL D VY Sbjct: 69 GALGKFLELVAGGQVPKGSYLIIESLDRFSREDALDVISEFSKVLRSGVTIVTLLDGQVY 128 Query: 121 NIDSLN-EPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 + + + EP +L ++++ RA+EES+ K RV +W+KKR+ A S ++TA P WL Sbjct: 129 SRERIKAEPMALFGSLMVMMRAHEESKTKGKRVGEAWEKKRKSA--SDAVLTARVPGWLQ 186 Query: 180 L--DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVI 237 + D R P + + IF + +A+ L + + F W S + Sbjct: 187 VVEDGGRRRIEFKPHGREVVRRIFADTVNGYGKLKVAQRLKEAGFETFE-DGKTWHGSYV 245 Query: 238 EKLLANKALIGICVPSYR----ARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNS 293 +K+L N+A G P R R + GYYP +S+ F Sbjct: 246 QKVLRNRATFGEMQPYKRDEEGRRVPAGPPVKGYYPAAVSEADFMRASAALALRDKSGGP 305 Query: 294 SKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDR-PSIKRDLVDYN 352 + NLLR + +C CG M G + VC C + DL + Sbjct: 306 REATGEANLLRNLARC-TCGGRMRRENKGGKSSAWLVCAEASRGDCTNTRRWRLDLAEEK 364 Query: 353 II-NELLFNCSKIQPVENKK-DANETL---ELKIIELQMKINNLIVALSVAPEVTAIAEK 407 ++ + K+ E +K DA T+ E K E+ ++ ++ + + VTA A + Sbjct: 365 LLGCSARIDFRKLLAAEGEKMDAPPTVADYEAKAAEVSKRLAAIMAVVEMG--VTAYAHR 422 Query: 408 IRLLDKELRRASVSLKTLKS 427 L KE A L ++ Sbjct: 423 AVELQKESDEAEAELARVRR 442 >UniRef50_Q1Z7J0 Site-specific recombinase n=1 Tax=Photobacterium profundum 3TCK RepID=Q1Z7J0_PHOPR Length = 609 Score = 320 bits (819), Expect = 9e-86, Method: Composition-based stats. Identities = 127/455 (27%), Positives = 207/455 (45%), Gaps = 25/455 (5%) Query: 1 MKK-AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 MKK A +Y+RFS+P Q GDS RQ ++ + D L + D G+SAFKG++ Q Sbjct: 1 MKKIAYSYLRFSTPRQAKGDSYRRQMEAARKYAEEK-DLSLQEDAFNDFGISAFKGRNVQ 59 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 +GA +FL ++ G I G LLVE+ DRLSR + EA+ +L+ ++ GI V+TL D + Sbjct: 60 NGALGDFLTLVQDGQIPKGAYLLVENHDRLSRTEPEEALHQLQSLVRAGIVVVTLHDGEM 119 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTA-SCPRWL 178 Y + + L+K+I+ +RA+ ES IKS R K W+K+RQD+L++G + A P WL Sbjct: 120 YKRGEM-DVMRLMKSIIYMERAHNESMIKSQRGKSIWEKRRQDSLQTGKVCRASRLPSWL 178 Query: 179 SLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIE 238 + ++ V D D+ + + L+FK IA+ LND V F W +VI Sbjct: 179 KWEGEQ--VVIDEDKAEAVRLMFKWCAGGAGYQTIARRLNDTRVPTFRT-GVEWRAAVIA 235 Query: 239 KLLANKALIGICVPSYRA----RGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSS 294 +L N+A IG + R I YYP ++S F AVQ S Sbjct: 236 AILKNRAAIGEFQYHQKNSEDKRIPIGEPINNYYPSIVSVSSFQAVQSTIRKRDNHSGQF 295 Query: 295 KNPMLINLLRTVMKCEACGNTMIVHAVSGSLHG-----YYVCPMRRLHR--CDRPSIKRD 347 NL +++KC CG+ M V HG ++VC C Sbjct: 296 SKGRAHNLFTSLIKCGNCGSPMTVATKGRKTHGSPASTHFVCTRASSGGGECLNLQWDSS 355 Query: 348 LVDYN-------IINELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPE 400 +++ + ++ + + + L+ I Q + ++ A+ Sbjct: 356 VIERHFKQAFPLFMDHYTRGDTDLDLTRKVNEHVSELQRDIELKQEALEYIVSAIEQGQG 415 Query: 401 VTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSD 435 V + L+ E+ ++ ++++ + D Sbjct: 416 VQVFVSRAAALEAEIIGIREQIEDVRTQALPKTED 450 >UniRef50_Q2BRM1 Site-specific recombinase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BRM1_9GAMM Length = 618 Score = 319 bits (818), Expect = 1e-85, Method: Composition-based stats. Identities = 126/447 (28%), Positives = 216/447 (48%), Gaps = 26/447 (5%) Query: 4 AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAF 63 A+ Y+R+SS Q GDS RQ LI + K N+ ++++ +D +SA+ G + +SG Sbjct: 38 AVYYIRYSSMQQEDGDSERRQLHLIEMYAKANNLRIDESLSAKDRSVSAYHGANMKSG-M 96 Query: 64 SEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNID 123 + L+ I+ G + G LL+E+LDR SR+ + ++ L I+++GI+V+T+ D +++ D Sbjct: 97 GDILNHIKEGRLQDGDYLLLENLDRFSRDHILQSAPTLFQIISNGINVVTVSDGQLFSKD 156 Query: 124 SLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQ--DALESGTIMTASCPRWLSLD 181 +++++I+ RA++ES+ KS R K W KR+ S IMT+ P WL + Sbjct: 157 G-TALMTMMQSIMQLSRAHDESKAKSDRGKAVWDAKREAIKVGNSNKIMTSVSPNWLKPN 215 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 +T FV +R ++ IF L + +I K LN + F G+ W S I+K+L Sbjct: 216 KDKTEFVIHEERANIVKRIFDLSDQGIGSVSITKILNGENIPTF-GRAEFWQKSAIDKIL 274 Query: 242 ANKALIGICV--------PSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNS 293 ++A++G C + R + YYP+VIS+ LF VQ R + Sbjct: 275 NSRAVLGECEFYTGQVLENGKKRRVSTGIVVKDYYPKVISEALFDRVQMKRKSRVTGGGG 334 Query: 294 SKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHG--YYVCPMRRLH-RCDRPSIKRDLVD 350 K + NL ++KC C +TM G Y C RC + + D V+ Sbjct: 335 RKGSLFSNLFTGIVKCGECNSTMQFINKGKRPKGRTYLKCRGHEHGTRCKGVNWRYDKVE 394 Query: 351 YNIIN--------ELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPE-- 400 +IIN +LL ++ + ++ + +E ++E+ KI+ L+ L Sbjct: 395 SHIINLMQHLPIQDLLPQEAQETQLMQQEKEVQAMENSVMEINSKISKLLDILDDCDNSA 454 Query: 401 VTAIAEKIRLLDKELRRASVSLKTLKS 427 + +I E++ +L L LKS Sbjct: 455 IKSITERVSTYQNKLDAEQHKLSALKS 481 >UniRef50_B9M0D0 Recombinase n=1 Tax=Geobacter sp. FRC-32 RepID=B9M0D0_GEOSF Length = 619 Score = 319 bits (818), Expect = 1e-85, Method: Composition-based stats. Identities = 139/496 (28%), Positives = 226/496 (45%), Gaps = 42/496 (8%) Query: 4 AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAF 63 I+Y+RFS+ Q G S+ RQ L ++ + + D ++Y DLG SA+ G H + G F Sbjct: 6 CISYIRFSNVSQSDGSSVERQLELSQKYAEEHGLILDDKLSYRDLGRSAYSGDHVRRGHF 65 Query: 64 SEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNID 123 EFL+ + G I G+ LLVESLDRLSRE V +A + ++I+ I ++TLCD Y + Sbjct: 66 GEFLELVRQGSIPTGSVLLVESLDRLSRENVLDAFAQFQVIVGEDIKIVTLCDGMEYTRE 125 Query: 124 SLNEPYS-LIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 +LN + LI ++ I RA EES KS R++ + + KRQ+ TA+CP WL L Sbjct: 126 NLNSDFGKLIISLTIMARAYEESCRKSERIRAANRFKRQNL--DKVKYTANCPTWLRLIK 183 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 F DR + IF + E + IA+ LN ++ W S I K+L+ Sbjct: 184 SENRFEVIHDRAAIVNRIFSMSYEGMGIKTIARILNHEKIQPPRS-SLGWCQSSIRKILS 242 Query: 243 NKALIGICVPSYRAR--GKGISE---IAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNP 297 ++++IG P R K + E + GY+PR++ D++++AVQ G S + Sbjct: 243 SRSVIGEYQPHIYNRATKKHVPEGSPVPGYFPRIVEDEVYFAVQA--RLCNGTHISGRTA 300 Query: 298 MLINLLRTVMKCEACGNTM--IVHAVSGSLHGYYVC-PMRRLHRCDRPSIKRDLVDYNII 354 + NL + KC CG M + H + VC RR +C S K + ++ + Sbjct: 301 KIQNLFGGITKCGYCGARMDIVSHKNRNEISRLLVCDQARRGVKCSYISFKCNELESAFL 360 Query: 355 NEL----LFNCSKIQPVENKKDANETLEL------KIIELQMKINNLIVALSVAPEV--- 401 + + KI+ +++ E + +++++ +I L L + Sbjct: 361 SYCKEIDFISVLKIEGTRDQQRLTELTQQVAAKNGELLDINRQIELLGNELPQITDTLEL 420 Query: 402 --------------TAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLT-SKNG 446 AI + I + +KE+ + S+ +K N D S Sbjct: 421 GFFRTRLSKLLQAKAAIEDAIAVREKEINELNASMHDADNKAGNIAELMDYFDAAPSDED 480 Query: 447 RELCRTLAYKTFEKII 462 R L RT +I+ Sbjct: 481 RVLVRTRLRNEIRQIV 496 >UniRef50_Q39QW8 Resolvase-like:Recombinase n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39QW8_GEOMG Length = 622 Score = 319 bits (817), Expect = 2e-85, Method: Composition-based stats. Identities = 149/519 (28%), Positives = 239/519 (46%), Gaps = 33/519 (6%) Query: 1 MKK--AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHA 58 M++ I+Y+RFS Q G SL RQ +L + + + D +Y+DLG SAF +H Sbjct: 1 MERPLCISYIRFSKATQAEGSSLERQLQLSRTYAEEHGLVLDDKHSYQDLGKSAFTSEHV 60 Query: 59 QSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNT 118 + G F FL+ ++ G + G+ LLVESLDRLSRE V A ++ + IL+ GI ++TL D Sbjct: 61 KEGEFGVFLEFVKQGRVPKGSVLLVESLDRLSRESVLTAFKQFQEILDAGIKIVTLSDKM 120 Query: 119 VYNIDSLN-EPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRW 177 Y + ++ ++ I RANEES KS R+ +W+ KR++ +TA+CP W Sbjct: 121 EYTKEGFEANIGNIFISLGIMARANEESLRKSERICAAWRLKRKNLHN--IKLTANCPGW 178 Query: 178 LSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVI 237 L L + F+ DRV+ ++ IF+L + + AI+ LN ++ F K W + + Sbjct: 179 LELTPDKKDFILKEDRVEIVKQIFELSLSGLGVKAISTILNKQKIEPFRSK-IGWYQTTV 237 Query: 238 EKLLANKALIGICVPSY--RARGKGISE---IAGYYPRVISDDLFYAVQEIRLAPFGISN 292 K+L+N A+IG P K + + I Y+P +I D FYAVQ G Sbjct: 238 RKILSNSAVIGEFQPHVFGSKHSKPVPDGELIKDYFPPIIDTDTFYAVQA--KLKNGAHR 295 Query: 293 SSKNPMLINLLRTVMKCEACGNTM--IVHAVSGSLHGYYVC-PMRRLHRCDRPSIKRDLV 349 + + NL +C CG+ M + G Y VC RR +C S+K + + Sbjct: 296 PGRTAKVENLFSGYTRCGYCGSRMDVVARHNVGGEVRYLVCDSARRGVKCSYISMKCNEI 355 Query: 350 DYNIINELL-FNCSKIQPVENKKDANETLEL---------KIIELQMKINNLIVALSVAP 399 + + + E + D N EL K++++Q +I+ L V L Sbjct: 356 EKAFFEYCREIDIRYVLRAEQQADQNRLNELRKSLTARNGKLMKVQKQIDMLNVFLDDIT 415 Query: 400 EVTAIA---EKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYK 456 E + E+I+ +E S ++ L + D ID+ +N L + Sbjct: 416 ERAELEHYHEQIKKKLEEKTNLSEEIEKLSKGICIAEYDNNNIDVRVQNLLTLDKAQNKS 475 Query: 457 TFE--KIIINTDNKTCDIYFMNGIVFKHYPLMKVISAQQ 493 E KI+ + ++ I+ YP V S +Q Sbjct: 476 VKEDDKIMFRIRLRDELRQIISQILV--YPRGSVFSDEQ 512 >UniRef50_B5XQB9 Site-specific recombinase, resolvase family n=6 Tax=Enterobacteriaceae RepID=B5XQB9_KLEP3 Length = 523 Score = 318 bits (814), Expect = 4e-85, Method: Composition-based stats. Identities = 141/490 (28%), Positives = 232/490 (47%), Gaps = 27/490 (5%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 M++ I Y+RFSS Q GDS+ RQ+ L WLK N D + + D G SA+ G H + Sbjct: 1 MRQVITYLRFSSKPQERGDSIRRQKGLFERWLKDNPDAKVVD-EFSDEGASAYHGHHLK- 58 Query: 61 GAFSEFLDAIEHGYILPG-TTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 G F L I+ G L G T LLVES RL+R+K + LI G+DVI L + Sbjct: 59 GDFGRMLQNIQDGKYLSGQTVLLVESETRLNRQKARNTENLVDLITGKGVDVICLESGKI 118 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 Y ++++ + I+ + A A+++S+ KS +V +W+ + Q ALE +T + P W+ Sbjct: 119 YTSTNIDDLDTSIQLKIAAHIAHQQSKEKSIKVSAAWEHRAQLALEGKQQLTKNVPGWID 178 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKE--SAWGPSVI 237 D ++ + T+ IF L + SL+ IA+YL + +K+FS +E + + + Sbjct: 179 PDTRKL-----NEHSSTVVTIFDLLLSGESLHNIARYLQANNIKSFSRREKANGFSVHSV 233 Query: 238 EKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPF-GISNSSKN 296 +L +++ +G S R I YY I F QEI G + +S N Sbjct: 234 RTILRSESTVGTLAASKRNDR---PAIPNYYEPAIDVATFNKAQEILSKNRVGRAPASDN 290 Query: 297 PMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINE 356 P+ INL + +++C CG ++ V + G Y C RC+ P+IKR D +++ Sbjct: 291 PITINLFKGIIRC-QCGASVHPTGVKATYQGVYRCNNVPDGRCNVPTIKRKPFDKWMLDN 349 Query: 357 LLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTAIAEKIRLLDKELR 416 ++ + K E +E +I + K+ L +VT + E+++ L+ + Sbjct: 350 IIGFLERSDGNNTDKRKAE-IEYQISLVTSKLKKAATLLLELDDVTELKEQVKELNIQRI 408 Query: 417 RASVSL------KTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTC 470 L +TL K ++ S+ IDLT+K GR + + K + I + + Sbjct: 409 NMQSELDDLNQRETLSDKPLHHLSE---IDLTTKAGRVEAQLILSKFVQSIELQRE--MI 463 Query: 471 DIYFMNGIVF 480 I NG V Sbjct: 464 IITLRNGAVI 473 >UniRef50_Q0T5X8 Hypothetical bacteriophage protein n=5 Tax=Enterobacteriaceae RepID=Q0T5X8_SHIF8 Length = 312 Score = 316 bits (809), Expect = 1e-84, Method: Composition-based stats. Identities = 136/314 (43%), Positives = 204/314 (64%), Gaps = 12/314 (3%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDT-ITYEDLGLSAFKGKHAQ 59 M++AI+Y+RFSS Q+ GDS+ RQ +L+ +WL N ++YLD+ ++++DLG SAF GKH + Sbjct: 3 MRRAISYIRFSSERQLKGDSVRRQSKLVTDWLDKNPEFYLDSSLSFKDLGKSAFSGKHLK 62 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 G +FL AIE G + G TLL+ESLDRLSR+ + A E L+ IL G+DV+TL D Sbjct: 63 -GGLGDFLTAIEKGLVKAGDTLLIESLDRLSRQDIDIASELLRRILRAGVDVVTLSDGEH 121 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 Y +SL +P +LIK+ILI QRA+EES KS RV+ +W +K++ + G ++ CP WL Sbjct: 122 YTRESLKDPLALIKSILIMQRAHEESLRKSERVQAAWNRKKEL-ISEGIKVSRRCPAWLR 180 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKN---FSGKESAWGPSV 236 L+D R F PD+V+ ++ F LR++ S AI + LND + ++ K+ W + Sbjct: 181 LNDDRRTFTIIPDKVEVVKRAFDLRLQGLSFWAITRTLNDEGHLSLNQYTPKQKGWSDTA 240 Query: 237 IEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKN 296 ++KLL N+A+IG P+ G E+ GYYP +IS+ LFY VQ++ +G ++ S N Sbjct: 241 VKKLLRNRAVIGCFTPA------GREEVQGYYPAIISESLFYRVQQLNTGQYGRASVSSN 294 Query: 297 PMLINLLRTVMKCE 310 P+ +NL R ++KCE Sbjct: 295 PLSVNLFRGIIKCE 308 >UniRef50_A9APW9 Recombinase n=16 Tax=root RepID=A9APW9_BURM1 Length = 560 Score = 311 bits (797), Expect = 4e-83, Method: Composition-based stats. Identities = 130/518 (25%), Positives = 220/518 (42%), Gaps = 52/518 (10%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 K +Y+RFS P Q +G S +RQ A W + T+T D GLSAF +H + GA Sbjct: 8 KVYSYLRFSDPKQAAGSSADRQMEYAARWATEHDMQLDATLTLRDEGLSAFHQRHIKQGA 67 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 FL AIE G I PG+ L+VE LDRLSR + +A +L I+N GI V+T D YN Sbjct: 68 LGVFLRAIEDGRIQPGSVLIVEGLDRLSRAEPIQAQAQLAQIINAGITVVTASDGREYNR 127 Query: 123 DSLN-EPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDAL---ESGTIMTASCPRWL 178 + L +P L+ ++L+ RA+EES+ KS RVK + +++ + + G I P W+ Sbjct: 128 ERLKAQPMDLVYSLLVMIRAHEESDTKSKRVKAAIRRQCEGWVAGTWRGIIRNGKDPHWV 187 Query: 179 SLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIE 238 L + F P+RV + + L +E I + L + + + + Sbjct: 188 RL-GEHGKFEHVPERVLAVRTMIDLFLEGHGAIEITRRLTEQNLYVSNAGN---YSVHMY 243 Query: 239 KLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPM 298 +++ N+ALIG S + GYYP +++ + F +Q+ + P Sbjct: 244 RIVRNQALIGEKRISVDGE---EFRLDGYYPPILTREEFAELQQTMSERGRRKGKGEIPN 300 Query: 299 LINLLRTVMKCEACGNTMIVHAVS------GSLHGYYVCPMRR-------LHRCDRPSIK 345 +I L + C CG M S+ CPM C+ ++ Sbjct: 301 IITGLS-ITVCGYCGRAMTTQNSKARAPKGKSVVRRLSCPMNSFNEGCPIGGSCESEIVE 359 Query: 346 RDLVDYNIINELLFNCSKIQPVEN----KKDANETLELKIIELQMKINNLIVAL--SVAP 399 R L+ Y FN S++ ++ + + +++ +I + AL Sbjct: 360 RALMRYCSDQ---FNLSRLLEGDDGTARRTAQLAVARQRASDIEAQIQRVTDALLSDDGK 416 Query: 400 EVTAIAEKIRLLDKELRRASVSLKTLKSK-------GVNSFSDFYA-----IDLTSKNGR 447 A + R L+ +L ++ L+ + G+ + ++ +A + + R Sbjct: 417 APAAFTRRARELETQLEEQRREIEALEHQIAASSAHGIPAAAEAWAQLVDGVLALDYDAR 476 Query: 448 ELCRTLAYKTFEKIII------NTDNKTCDIYFMNGIV 479 R L TF KI++ D+ D + +G + Sbjct: 477 MKARQLVADTFRKIVVYQRGFAPIDDAAADRWKRSGTI 514 >UniRef50_Q3KAI6 Putative integrase/recombinase n=1 Tax=Pseudomonas fluorescens Pf0-1 RepID=Q3KAI6_PSEPF Length = 532 Score = 310 bits (794), Expect = 8e-83, Method: Composition-based stats. Identities = 124/514 (24%), Positives = 222/514 (43%), Gaps = 31/514 (6%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 MK+AI+Y+RFSS Q G S+ RQ +IA+WLK + DY + + + DLG S + G+H + Sbjct: 1 MKQAISYVRFSSDRQRHGSSVERQEGMIADWLKRHPDYEMSDLKFSDLGKSGYHGEHIKE 60 Query: 61 -GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIER-LKLILNHGIDVITLCDNT 118 G F + L A+E G+I G +LVE++DR R + + + + IL G+ +ITL DNT Sbjct: 61 AGGFGKLLKALEDGFIRAGDVVLVEAIDRTGRLEPMDMLTLVINPILKAGVSIITLDDNT 120 Query: 119 VYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWL 178 Y+ +S+N + + Q A+ S S+RV S+KK+R+DA + G + P WL Sbjct: 121 TYSKESVN-TAQIFLLVAKIQAAHGYSAALSTRVADSYKKRRKDAAKYGIVPRRITPVWL 179 Query: 179 SLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIE 238 + D D I+ F+L + + IAK + + V+ + +E Sbjct: 180 NPDGT-----VREDVAPWIKTAFELYVSGVGKSTIAKRMRESGVERLAKASGP----GVE 230 Query: 239 KLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPM 298 L NKA+IG I YP +I LFY Q + Sbjct: 231 GWLRNKAVIGK--WETLEGTPDHQIIDDIYPAIIEPSLFYKAQVH---AEKMKTQRPIKT 285 Query: 299 LINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRC-DRPSIKRDLVD----YNI 353 + L +++C CG IV + G H + + C + + + ++D Y Sbjct: 286 ASHFLVGLVRCGECGKNYIVQNLHGKPHSMRCRTRQSQNECTNSHCVPKPVLDAIYRYTS 345 Query: 354 INELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTAIAEKIRLLDK 413 + + + Q N K+ T E +++ + +++ L+ AL+ + + E ++ Sbjct: 346 VTAAIEAVQQQQMGVNDKEIV-TREAELLAITKRVDGLVQALTQTGPIPEVIEALKQSRI 404 Query: 414 ELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKI-----IINTDNK 468 E A +L L+S V S + + + + T Sbjct: 405 EREAAESALVILRSTVVPSAGTHWQEMGKVWKLEAADAQRLAAMLKLVDYHITVAPTGEI 464 Query: 469 TCDIYFMNGIVFKHYPLMKVISAQQAISALKYMV 502 T + +++++ + + + + ++ K M+ Sbjct: 465 TAS---HSEVLYRYIGVDRALDKYKLLANGKLML 495 >UniRef50_B0K4R6 Recombinase n=9 Tax=Clostridia RepID=B0K4R6_THEPX Length = 506 Score = 309 bits (791), Expect = 2e-82, Method: Composition-based stats. Identities = 108/510 (21%), Positives = 205/510 (40%), Gaps = 57/510 (11%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 +A AY R+SS Q +S+ Q R I E+ + N+ + Y D SA A Sbjct: 7 RAAAYARYSSDNQRE-ESIEAQLRAIKEYCEKNNIQLV--KIYTDEAKSATTD---DRPA 60 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F L I+ + ++V LDR +R + A R + + +G+ +I++ + Sbjct: 61 F---LQMIKDSSLGLFNAVIVHKLDRFARNRYDSAFYR-RQLKKNGVKLISVLEQLD--- 113 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 + P S+I ++ A S+ + V K+ A +G P + D Sbjct: 114 ---DSPESIILESVLEGMAEYYSKNLAREVMKGLKENAFQAKFNG----GIPPLGYDIVD 166 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 ++ +V + + + LIF+L + I LN + G + + + I ++L Sbjct: 167 EK--YVINEKEAEAVRLIFELYAQGYGYRHIIDELNLRGYRTKKG--NPFSKNSIHEILK 222 Query: 243 NKALIGICVPSYRARG------KGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKN 296 N+ IG + + + + + I P +I DLF VQ+ ++ I+ + + Sbjct: 223 NEKYIGKYIFNKGTKKNHRMVKEDVIVIDNAIPAIIDKDLFEQVQK-KIEERKITRGANS 281 Query: 297 PMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINE 356 + LL ++ C C + M+ G Y R +C I ++ ++ +I+E Sbjct: 282 AKRVYLLSGLVYCGICDSKMVGCLSRGKYVTYRCSRKDRTKQCTNRDINKEKLEAFVIDE 341 Query: 357 LLFNC---------SKIQPVENKKDANETLE------LKIIELQMKINNLIVALSVAPEV 401 L +K+ EN+K E +E + E++ ++ N++ A++ Sbjct: 342 LNKRVLDPKVAPVLAKLLNEENQKLNKERVEEITLLKKRYKEVEEQMKNIVEAIAQGMFQ 401 Query: 402 TAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDL----------TSKNGRELCR 451 + EK+ L+ + +K L++K SF I +SK+ E+ Sbjct: 402 PIMKEKMNELEAMRNELAYRIKELENKKETSFITPEMILKIFEKDREIINSSKDPHEIKE 461 Query: 452 TLAYKTFEKIIINTDNKTCDIYFMNGIVFK 481 L +KII+ D C+ YF G F+ Sbjct: 462 VL-KNYIKKIIVTPDEIKCEFYFWIGDDFR 490 >UniRef50_B9XI16 Resolvase domain protein n=1 Tax=bacterium Ellin514 RepID=B9XI16_9BACT Length = 540 Score = 306 bits (784), Expect = 1e-81, Method: Composition-based stats. Identities = 129/500 (25%), Positives = 231/500 (46%), Gaps = 41/500 (8%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 +KAI+Y+RFSS Q G SL RQ + ++ + +++T +DLGLSAF+GK+A SG Sbjct: 13 RKAISYIRFSSLKQEEGFSLARQLEGTKGFCSRHNLFLDESLTVKDLGLSAFRGKNADSG 72 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 FL A+ I GT L+VE+LDRL+R + EA L IL GIDV + ++ VY+ Sbjct: 73 NLGVFLAAVRENKIPKGTVLVVEALDRLTRNNIVEASHLLTDILRQGIDVGLVTEDKVYS 132 Query: 122 IDSLN-EPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 D +N P+ I A R +ES +KS R+K +W +K++ +E+ + P WL Sbjct: 133 YDYINKNPFEFIVATTYLIRGGDESRMKSERIKDAWSRKKRCIVETKEAVKIPAPCWLKR 192 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRM-ERRSLNAIAKYLNDHAVK---NFSGKESAWGPSV 236 + ++ + + K ++ IF + E + +++ +N V N + S W Sbjct: 193 EGQKWS--VISKKAKVVKEIFAAYLKESLGIWRLSQTMNSQKVPVITNGATPASKWHRIT 250 Query: 237 IEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKN 296 + ++L +KA+IG K + Y+P +I FYAVQ +L + Sbjct: 251 LHRILTDKAVIGTYT-------KLDEPVENYFPAIIPQKDFYAVQ-AKLQERRHYRGRHS 302 Query: 297 PMLINLLRTVMKCEACGNTMI-------VHAVSGSLHGYYVCPMRRLHRC-DRPSIKRDL 348 ++LL+ + KC CG+TM + L+ Y C L C S+ + Sbjct: 303 LKDVSLLKGICKCGKCGSTMTRITRTRKIKGGGSKLYRYLYCHNSILGLCKPATSVDLNE 362 Query: 349 VDYNIINELLFNCSKIQPV-ENKKDANETLELKIIELQ-----MKINNLIVALS--VAPE 400 ++ ++ + + + + + E K D + EL+ I+ Q + + LI + A Sbjct: 363 LERIFLHYMFTSETALTFLSECKADDSIQTELRTIDGQIEDKAARRDRLIAVIESDAAAT 422 Query: 401 VTAIAEKIRLLDKELRRASVSLKTLKSK------GVNSFSDFY----AIDLTSKNGRELC 450 +++ E+I L++E++ V +L + G + +D + + R Sbjct: 423 PSSVLERIASLEQEIKMLRVKKDSLTATLNRNPQGEAALNDLFVTAEKVLKNKPADRLRL 482 Query: 451 RTLAYKTFEKIIINTDNKTC 470 R L + + + +++ Sbjct: 483 RELIRQFVRSMTVYPEHRKA 502 >UniRef50_UPI0001BC6B74 site-specific recombinase n=1 Tax=Vibrio parahaemolyticus AQ4037 RepID=UPI0001BC6B74 Length = 531 Score = 303 bits (775), Expect = 1e-80, Method: Composition-based stats. Identities = 129/451 (28%), Positives = 230/451 (50%), Gaps = 20/451 (4%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHA-Q 59 M A +Y+RFSS Q GDSL RQ +L ++ N+ L T+ DLG+SAF ++ + Sbjct: 1 MAIAYSYIRFSSSQQSQGDSLRRQTQLAEKYCIENN-LTLSDTTFRDLGVSAFHSTNSQE 59 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 +FL A+ G I G+ LLVESLDRLSR KV A+ ++ I+ G+ ++TL DN + Sbjct: 60 DSGLGQFLSALNQGRINEGSYLLVESLDRLSRAKVQTALRQMLNIIELGVKIVTLMDNRI 119 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 Y+ +S + LI ++ I +RA+ ES+ KS R+K +W KRQ+ + +S P WLS Sbjct: 120 YDQES--DTTDLIISLTIMERAHNESKTKSERIKAAWVHKRQNPTTTNRH--SSTPFWLS 175 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEK 239 L+ + + V+ + I++L ++ + I ++LN+ +K G +W + + + Sbjct: 176 LNPDKKTYKLKEKYVEIVRKIYQLSIDGWGVIKIVRHLNESNIKAPKG--GSWATTTVSR 233 Query: 240 LLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPML 299 +L +KA++G P + ++ I YYP +I + +Y ++ + + + Sbjct: 234 VLTSKAVLGHYEPMQNRKSLNLT-IEDYYPSIIDEATYYLSRQRQNERSKPEAAGRKTNY 292 Query: 300 INLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINELLF 359 N L + KC+ CG++M S SL Y C + C I+ +L+ Y + E+ Sbjct: 293 PNPLSQIAKCKLCGSSMYYENKSKSLK-YLTCREFKKGSCTNKPIRIELI-YRFVCEVFN 350 Query: 360 NC------SKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEV--TAIAEKIRLL 411 + +K+ NKKD N+ EL+ + + + N L LS++ + T I E+I++ Sbjct: 351 SPMYYQYQAKLVEKSNKKDNNKLEELEAKQTEQE-NALRALLSMSNDFSNTIIQEEIKVR 409 Query: 412 DKELRRASVSLKTLKSKGVNSFSDFYAIDLT 442 + + ++ +K++ + I+ T Sbjct: 410 SERIESFKKHIENVKAEQAVEHTRSTHINFT 440 >UniRef50_B5EDN9 Recombinase n=1 Tax=Geobacter bemidjiensis Bem RepID=B5EDN9_GEOBB Length = 545 Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats. Identities = 135/495 (27%), Positives = 226/495 (45%), Gaps = 50/495 (10%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 M +A +Y+RFS P Q GDSL RQ E+ ++ LD ++ DLG SA++G HA+ Sbjct: 1 MARAFSYLRFSRPEQRKGDSLRRQTEAAREYADRHN-LALDDFSFRDLGHSAYRGSHAEI 59 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 G S+FL AI+ G++ PG LL+E+ DRLSR+ + EA + L+ I N GI V+TL D +Y Sbjct: 60 GGLSQFLAAIDTGHVKPGDYLLIENFDRLSRQVLDEAFDLLRTICNKGISVVTLQDGNIY 119 Query: 121 NIDSLNEPY-SLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 + +SL+ + SL+ A+ RA++ES +KS R+ +W KR+D +T P WL Sbjct: 120 DKESLSRNFASLMWALFAFARAHDESAVKSDRLLSTWHNKRKDMR--VKPLTGKLPGWLR 177 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNF---SGKESAWGPSV 236 L ++ DR + ++ IF +E +S I LN + V+ + K W S Sbjct: 178 LSAEKQ-ITVIEDRAEVVKEIFTRYVEGQSPRTIVNRLNQNNVECWGIGKQKSKKWNSSY 236 Query: 237 IEKLLANKALIGICVPSY------RARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGI 290 I+K+L N+++IG P + + + Y+P +I + F VQE+R + Sbjct: 237 IQKILDNESVIGRFTPHKIMFEGIKKTRVPLETVNDYFPVIIDAETFNRVQEVR-TRNKL 295 Query: 291 SNSSKNPMLINLLRTVMKCEACGNTMI-VHAVSGSLHGYYVCPMRRLH---------RCD 340 L N + +C CG+ ++ V+ S S Y VC + C Sbjct: 296 GRRKATGGLTNAFSMLFRCPVCGSWLVRVNKNSKSNWQYLVCGAAKAGYRDADSGYRLCP 355 Query: 341 --RPSIKRDLVDYNIINELL---FNCSKIQPVENKKDANETLELKIIELQMKINNLIVAL 395 +++ D+V+ ++ +L F S +E + A E + E + NL A+ Sbjct: 356 GGYKAVRYDVVEQAFVDAVLCGRFISSTGSALEAVEAAIEAQRKRREESLRRSTNLTNAI 415 Query: 396 SVAPEVTA--IAEKIRLLDKELR----------------RASVSLKTLKS--KGVNSFSD 435 + + + + + E+ + L+ L S KG + Sbjct: 416 AEGALKGSSPVIKDLEKYSLEVVGPADDDLQIVGKVEHWTVAEELELLASAIKGAEIAIE 475 Query: 436 FYAIDLTSKNGRELC 450 +D + R + Sbjct: 476 RLELDREALKPRTVD 490 >UniRef50_C9QK00 Site-specific recombinase n=1 Tax=Vibrio orientalis CIP 102891 RepID=C9QK00_VIBOR Length = 514 Score = 291 bits (745), Expect = 4e-77, Method: Composition-based stats. Identities = 128/435 (29%), Positives = 200/435 (45%), Gaps = 18/435 (4%) Query: 4 AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKH-AQSGA 62 A +Y RFSS Q GDS+ RQ +L ++ ++ L T ++EDLG+SA+ + + Sbjct: 3 AYSYRRFSSATQSHGDSIRRQIQLAEDYCHKHN-LELSTDSFEDLGVSAYHSNNSLEDAG 61 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 +F+ A+E G I LLVESLDRLSR + EA+++L I N G+ V+TL DN Y Sbjct: 62 LGQFIAALEEGKIPTPCYLLVESLDRLSRANIDEALQQLLAITNQGVIVVTLFDNQTYKK 121 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 I AI+ RANEESE KS R+K W K+R D + T + P WL L D Sbjct: 122 GM--GLAEFITAIVTMARANEESETKSKRLKAVWHKRRTDP---NALKTNNKPFWLDLSD 176 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 +T+F+ + + + I++L + + I+K+LN + + GK WG +VI K+L Sbjct: 177 DKTSFILNES-AELVREIYELSIGGMGSHLISKHLNAKGIPSPKGK--TWGDAVITKVLN 233 Query: 243 NKALIGICVPSYRARGKGI---SEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPML 299 KA++G P+ R K + I +YP VI++ FY Q Sbjct: 234 TKAVLGEYQPNQRVNRKSVPIGEPIQDFYPSVINEQTFYLSQAQIKQRAKSLKRGSTSSH 293 Query: 300 INLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINELL- 358 +N+L+ V C C + + S Y+ CP CD I + + + L Sbjct: 294 LNILKDVGTCRRCSAPLRLQKQS--HLYYFRCPESLKGTCDSKPINIMFLRDWLKEQWLT 351 Query: 359 -FNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTAIAEKIRLLDKELRR 417 + K + + LE K L ++ A + + I ++ D EL+ Sbjct: 352 PAFYKTWSKPKPKLNKLKPLEAKRQSLGEAYETMLEAFGSSSSSSTIKN-LQKRDSELQE 410 Query: 418 ASVSLKTLKSKGVNS 432 ++ LK + Sbjct: 411 LDKQIELLKQEQAEE 425 >UniRef50_A6D403 Resolvase-like:Recombinase protein n=1 Tax=Vibrio shilonii AK1 RepID=A6D403_9VIBR Length = 548 Score = 288 bits (736), Expect = 5e-76, Method: Composition-based stats. Identities = 144/540 (26%), Positives = 239/540 (44%), Gaps = 43/540 (7%) Query: 1 MKKAIA-YMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 M K I Y+RFSS Q G SL RQ I E+ + N +++ DLGLSA+ KH + Sbjct: 1 MTKIIIPYVRFSSAEQRKGHSLKRQIERIEEYARKNGYTVDNSLNLRDLGLSAYTAKHIE 60 Query: 60 SGAFSEFLDAIEHGYILPG--TTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDN 117 G+ FL+AIE I L +E DRLSR+ V +A IL +++ITL D Sbjct: 61 KGSLGVFLEAIEANLIPRDGSIYLCIEQFDRLSRQNVDDAYGLFSKILKSNVNIITLMDE 120 Query: 118 TVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASC-PR 176 VY DSL E S+I ++L+ Q+AN ESE KS RV +K + +D ++ AS P Sbjct: 121 KVYTKDSLTEMVSIISSLLLMQQANIESEKKSERVLAVFKDRLKDLQGGNKVVFASMLPG 180 Query: 177 WL-SLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAV-----KNFSGKES 230 W+ + K++ ++V+T+ +F+L +E +++ IA+ LND K + Sbjct: 181 WIENTGTKKSPHFVFNEKVETVREVFRLYIEGKTMGQIARLLNDRKTLQIARKRTKNFTN 240 Query: 231 AWGPSVIEKLLANKALIGICVPSYRARGKGISEI-AGYYPRVISDDLFYAVQEIRLAPFG 289 +W I LL+N+ +IG + + K E+ YYP IS D + VQ ++ Sbjct: 241 SWNSGKISHLLSNQCVIG------QLKIKKSGEVFEDYYPSAISLDDWDVVQSMKRTTAT 294 Query: 290 ISNSSKNPMLINLLRTVMKCEACGNTMIV----HAVSGSLHGY--YVCPMRRLHRCDRPS 343 + + IN+ + + C CGN + Y C RR H CD + Sbjct: 295 VKAGGR--KSINIFQGRLFCADCGNKYYFETDTQTTKTKEYRYHLLKCSGRRFHSCDSKT 352 Query: 344 IKRDLV---DYNIINELLFNCSKIQPVENKKDANETLELKIIELQM---KINNL-----I 392 I+ D + D+ I + + V + K+ N+ + ++ EL+ ++N++ I Sbjct: 353 IRYDDLLEMDHLFIKKHSEKNNDQSLVNDLKEKNKNINKQLRELEKENLELNSMFESGEI 412 Query: 393 VALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRT 452 ++ A T KI +L ++L + ++ + + SK R + Sbjct: 413 STIAFAKASTVTNNKIDVLKRDLAQNKQTIMLFSNTTKVEKIEKENPVFISKAKRHIKEN 472 Query: 453 L-------AYKTFEKIIINTDNKTCDIYFMNGIVFKHYPLMKVISAQQAISALKYMVDGE 505 Y + + + + V + Y L K I Q + K ++DG+ Sbjct: 473 FAAFIISSKYNSIVSLTHSGHISITETPNNYADVIETYSLFKDIKKQIQENDRKDVLDGK 532 >UniRef50_Q0G2L1 Putative uncharacterized protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G2L1_9RHIZ Length = 477 Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats. Identities = 132/466 (28%), Positives = 199/466 (42%), Gaps = 37/466 (7%) Query: 25 RRLIAEWLKVNSDYYLDTITYEDLGLSAFKGK-HAQSGAFSEFLDAIEHGYILPGTTLLV 83 + N +T+ D G SAF+G+ A F+ ++ G + G+ LLV Sbjct: 1 MEPARAYADSNGLDLDETL--RDEGRSAFRGRQRLDDAALGSFIAKVDRGDVPTGSYLLV 58 Query: 84 ESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDSLNE-PYSLIKAILIAQRAN 142 ESLDRLSREKV A+ +L+ GI ++TL D +Y+ DS+ E P+ L+ +I+I RA+ Sbjct: 59 ESLDRLSREKVLVALRLFLTLLDRGIIIVTLGDGRLYSSDSVGERPFELMISIVIMMRAH 118 Query: 143 EESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDKRTAFVPDPDRVKTIELIFK 202 EES IK+ RV +W +KRQ AL MT CP WL D + +R + IF Sbjct: 119 EESSIKAKRVGAAWDRKRQLALTERKAMTRVCPAWLEKDADGYRLI--AERATVVRRIFA 176 Query: 203 LRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLANKALIGICVPSYRAR-GKGI 261 + ++ AIA LN V F G+ W S ++KLL N+A IG VP +R Sbjct: 177 MSIDGMGSRAIAIALNSEKVPVF-GRGRYWHDSYVKKLLGNEATIGRFVPGAASRIAPAY 235 Query: 262 SEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAV 321 + Y+P V+ + FY A S + NL+ + C CG M Sbjct: 236 QPVDDYFPAVVDERTFYRSLAATRARASSSVRHPAGKVRNLVSGIAFCSECGGGMHYMNK 295 Query: 322 SGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETL-ELK 380 C RL S K DYN++ L I E +D +E + E Sbjct: 296 GRRGMTVLQCGSSRLKGGCSNSFKY---DYNMLENGLV----ILCSEAFQDRSEKIPEAD 348 Query: 381 IIELQMKINNLIVALSVAPEVTAIAE--------KIRLLDKELRRASVSLKTLKS----- 427 + EL ++ +NL LS E+ E +I L+ +L+ A +K+ K Sbjct: 349 LGELMVQRDNLAERLSRLIELVETGELAGQQVPRRIADLEAQLKSADAVIKSKKQAAKLL 408 Query: 428 ---KGVNSFSDFYAIDLTSKNG-----RELCRTLAYKTFEKIIINT 465 +F DF+ K R ++++ + Sbjct: 409 ESENSEKAFDDFFKFYRQMKQDETFVLRRNVAVALRTIIKRVVFDA 454 >UniRef50_A8GC08 Resolvase domain n=1 Tax=Serratia proteamaculans 568 RepID=A8GC08_SERP5 Length = 503 Score = 283 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 128/471 (27%), Positives = 225/471 (47%), Gaps = 38/471 (8%) Query: 4 AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAF 63 A +Y+RFSS Q GDSL RQ + E+ N L + ++DLG+SAF+ + + Sbjct: 9 AYSYVRFSSKRQELGDSLRRQTEMAEEYAIKNG-LKLSSKNFQDLGISAFREG--KRASL 65 Query: 64 SEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNID 123 + L AIE G I G+T+++E+LDRLSR + +E +K IL + V++L D + + Sbjct: 66 VDMLAAIEEGQITAGSTIIIEALDRLSRRGIDATLETVKEILRKDVQVVSLSDGLLLTKN 125 Query: 124 SLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDK 183 SLN+ S+I+ + A A++ESE K+ R++ + ++RQ AL SG + P WL + Sbjct: 126 SLNDLQSVIRIAVAADLAHKESERKAIRLRETKGQQRQAAL-SGKPINKILPFWLQRTET 184 Query: 184 RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLAN 243 AF D+ I +L+ E + N IAK LN + + + W + I K+L N Sbjct: 185 GYAF---SDKAGVARQIVQLKQEGKGSNMIAKALNKLGIAGV--RTAQWNHASITKMLKN 239 Query: 244 KALIGICVPSYRARGKGISE---IAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLI 300 AL G + + + + + YYP +IS + + +Q + S+ NP Sbjct: 240 PALYGAYQTGETTKDRELIKLELVEAYYPALISKEEWLLLQSDQSKSKRGRRSADNPY-- 297 Query: 301 NLLRTVMKCEACGNTMI--VHAVSGSLHGYYVCPMRRLHRCDRP-SIKR-DLVDYNIINE 356 +++C CG ++ H V L+ Y+ C + RC + SIK D I+ Sbjct: 298 ---SGLLRC-ECGGALVKRKHTVKEKLYVYHGCLNAKDGRCTQNISIKGLDGALTTILGR 353 Query: 357 LLFNCSKIQPVENKKDANETLELKIIELQMKINNLIV-ALSVAPEVTAIAEKIRLLDKEL 415 L F + ++ + LE +I +L K+ L LSV + + +++ + +++ Sbjct: 354 LEFKKKQTLDQSIHQE-RQQLEARINDLNSKLQVLDDIPLSVIKSIGTMESRLKEITEQI 412 Query: 416 ---RRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIII 463 R ++ +KS+ ++S +D ++L L + + I + Sbjct: 413 AKDEREQRGIEAVKSEKLSSITDGLELNL-----------LLKRVLKSITV 452 >UniRef50_C7CL55 Putative recombinase n=1 Tax=Methylobacterium extorquens DM4 RepID=C7CL55_METED Length = 582 Score = 278 bits (712), Expect = 3e-73, Method: Composition-based stats. Identities = 125/518 (24%), Positives = 225/518 (43%), Gaps = 59/518 (11%) Query: 5 IAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFS 64 ++Y RFS Q +G ++ RQ L+A +L+ N D L + D G+S F+GKHA+ GA S Sbjct: 12 VSYARFSHRKQAAGSTIERQEELLARFLQENPDITLHE-QFSDKGVSGFRGKHAKDGALS 70 Query: 65 EFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY-NID 123 L+AI+ G + L++ES+DRLSRE + +A +R +L G+ + +CD + + + Sbjct: 71 RLLEAIKVGRLPTPLVLIIESVDRLSREPMMDAWDRFNTLLKAGVT-VAVCDMRLEIDRE 129 Query: 124 SLN-EPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESG-TIMTASCPRWLSLD 181 +L+ + + L I +RA+ ES KS+ + W K + A I P W++LD Sbjct: 130 ALSKQSWKLHSLINAMERAHGESARKSTLITGGWNKSIKAAYARKSAIKGYVGPPWVTLD 189 Query: 182 DKRTAFVPDPD---RVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGK------ESAW 232 ++ +V V+T+ IF E + + IAK LN+ V F W Sbjct: 190 EETLRYVITEKNRPTVQTVRRIFDWAAEGATAHGIAKRLNEQQVPLFRAHVAKDHVRQGW 249 Query: 233 GPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISN 292 I ++L N+ ++G R +G I GY+ +IS +LF+ Q+ + G++ Sbjct: 250 YQGYITEILKNRQVLGEH------RYRGGEVIEGYFEPIISPELFFRAQQNLVRRPGVA- 302 Query: 293 SSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLH------GYYVCPMR-RLHRCDRP-SI 344 + L NL + C CG M + + Y +C R R C+ + Sbjct: 303 GRRGQTLSNLFTGLAFC-TCGGHMEMTRNRSATENGPEPIKYLMCSNRKRRFGCEAVGMV 361 Query: 345 KRDLVDYNIIN--------ELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALS 396 ++ +++ +++ S P+ D T+ L+I EL+ + + Sbjct: 362 NYPKLEEAVLSFLPNIPWADIVREESPDYPLPGIDDRIATVMLEIAELETTRSQARRMIL 421 Query: 397 VAPE-----VTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCR 451 E + E I L + L+ ++K V+++ + + T++ RE Sbjct: 422 KGEEFEAEFTPVLTEAIASLR-QAEARLAELQVERAKVVSTWENRPGLIRTAQEFREKMN 480 Query: 452 TL---------------AYKTFEKIIINTDNKTCDIYF 474 L + K++ +T KT + + Sbjct: 481 ILSDAERFIARTRLSETLKQMVTKMVCDTVRKTVAVEW 518 >UniRef50_B3X0B7 Recombinase n=1 Tax=Shigella dysenteriae 1012 RepID=B3X0B7_SHIDY Length = 285 Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats. Identities = 115/291 (39%), Positives = 172/291 (59%), Gaps = 15/291 (5%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLD-TITYEDLGLSAFKGKHAQ 59 M+K +Y+RFSS Q GDS RQ + I +WL + D+ LD ++++EDLG SAF G H + Sbjct: 1 MRKVYSYIRFSSTKQAFGDSHRRQSKAIQDWLASHPDHILDESLSFEDLGRSAFHGDHLK 60 Query: 60 SG-AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNT 118 G A FL+A++ G I P + LLVESLDR+SR+ + A E ++ IL GI V+TL D Sbjct: 61 EGGALRAFLEAVKQGLIPPDSVLLVESLDRVSRQSISHAQETIRAILEQGITVVTLSDGE 120 Query: 119 VYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWL 178 YN SL++ +LI+ I++ +R++ ES IKS R+K W KRQ + GT +T +CP WL Sbjct: 121 TYNRQSLDDSLALIRMIILQERSHNESVIKSDRIKKVWSHKRQQFEQDGTKITGNCPGWL 180 Query: 179 SLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGK--ESAWGPSV 236 L+ +F P V+TI IF ++ +SL+AIA+ LN + + K ++ W P+ Sbjct: 181 KLNSDGKSFSLIPHHVETIHRIFDEKLSGKSLHAIARDLNLENIPTITNKKVDTGWTPTR 240 Query: 237 IEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAP 287 + LL ++LIG+ ++ Y+P IS + F+AVQ I P Sbjct: 241 VRDLLLKESLIGVAYG-----------VSDYFPPAISKEKFHAVQMISKRP 280 >UniRef50_A6D144 Possible recombinase n=1 Tax=Vibrio shilonii AK1 RepID=A6D144_9VIBR Length = 520 Score = 276 bits (705), Expect = 2e-72, Method: Composition-based stats. Identities = 123/475 (25%), Positives = 213/475 (44%), Gaps = 30/475 (6%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 M AI Y+RFSS Q G SL RQ++LI ++LK + L + Y+DLGLS +KGKH ++ Sbjct: 1 MPNAIPYIRFSSSIQQKGSSLERQQKLIDDYLKSRPELTLSNLQYQDLGLSGYKGKHLEN 60 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 + L+A+E G+I G +LVE++DRL R E I L IL HG+ VITL DN Y Sbjct: 61 -DLGKLLEAVESGHIKSGDYILVEAMDRLGRLPELEMIALLHSILKHGVKVITLQDNQEY 119 Query: 121 NIDSLNEPYSLIKAIL-IAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 + ++L L+ + Q A++ S+ S R+ +W+KKR+ A E G + P W++ Sbjct: 120 SNEALASNGGLLYLLAGKVQMAHQHSKQLSQRISAAWEKKRKQA-ELGKGVKRKTPWWIT 178 Query: 180 LDDKRTAF-VPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIE 238 +++ F + + +F + I L + K F + P+ ++ Sbjct: 179 WNEETECFDTVTDADKQIMTDVFTWYLRGLGERRILARLREQFPKKFGTTD----PASVK 234 Query: 239 KLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPM 298 + NK IG ++I Y IS+ LFY VQ+ + + P Sbjct: 235 RWFTNKTAIGYW-----------ADIPNVYEAAISEQLFYQVQD--ELKRRSTGKGQTPR 281 Query: 299 LINLLRTVMKCEACGNTMIVHAVSGSLHGYYVC--PMRRLHRCDR-PSIKRDLVDY---N 352 + L +++C CG + A S C +R +C +I + D+ Sbjct: 282 SGHYLAGLIQCGECGGNYSMRANKHSPDAML-CGVSNKRKDKCKNGATIPVQVFDWVCTE 340 Query: 353 IINELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTA--IAEKIRL 410 ++ L + + +D + +I +L+ +++NL+ ++ + T + + Sbjct: 341 TYHDTLKQIEQKALSQEAEDELVVVNGRISDLESQLDNLMELVAQGSKRTQKKVLQVEEE 400 Query: 411 LDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINT 465 L++ R S + ++ SF+D K+ E+ L K I+ N Sbjct: 401 LEELESRQSELMLEVRKPNELSFADAALAGSELKDDPEVLGDLLRKAGYSIVANG 455 >UniRef50_A6D1G1 Recombinase n=2 Tax=Vibrio RepID=A6D1G1_9VIBR Length = 598 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 111/488 (22%), Positives = 201/488 (41%), Gaps = 31/488 (6%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSD---------YYLDTITYEDLGLSA 52 + A Y R S Q+ GD L RQ + +++++ + Y L D GLSA Sbjct: 6 RIAHIYSRVSKGTQVKGDGLRRQIEIASKFIEDVNMSNSRDGLPVYTLADSPIYDRGLSA 65 Query: 53 FKGKHAQS-GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDV 111 + G + FL A E+G + GT L+VE++DR+SR V +A +GIDV Sbjct: 66 YFGLNTDENAGLGAFLKAAENGQVEKGTLLIVEAIDRISRLPVDDARALFARFKKYGIDV 125 Query: 112 ITLCDNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMT 171 N + D ++ + A+ ESE KS R++ + KR E G T Sbjct: 126 AICRFNLIIYHDKSSDLGQDLLITTAIHLAHLESEQKSKRIRARFTHKRLLEKEGGARRT 185 Query: 172 ASCPRWLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESA 231 + P W+ L +T FV P+R + + + L+++ + I YLN+ ++ + A Sbjct: 186 SISPSWIELSKDKTHFVLIPERARIVRKMVDLKLQGWGAHRITVYLNERGYPCWN-RSKA 244 Query: 232 WGPSVIEKLLANKALIGICVPSYRARG-KGISE------IAGYYPRVISDDLFYAVQEIR 284 W ++EK L L+G P G KG+ + I GYYP +I+++ + + Sbjct: 245 WYTKIVEKYLKMIQLVGDFQPVEHVHGEKGMRKEPVGDVIKGYYPALITEEEWIRL---- 300 Query: 285 LAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSI 344 A F S + NL ++ C CG M + CD+ ++ Sbjct: 301 KASFKRSGGRQTGAFSNLFSYMLYCPTCGTCMSYFKPNRGRIKVRCRKQIDKQGCDQRAL 360 Query: 345 KRDLVDYNIINEL----LFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPE 400 + ++ +I L + +K+ N TLE ++ EL+ +++ + + Sbjct: 361 NYEEIEPRLIKALAGLDYAKINNNSFASLQKELN-TLEAQVAELEASADDIKTQMLEESD 419 Query: 401 ---VTAIAEKIRLLDKELRRASVSLKTLKSKGVN-SFSDFYAIDLTSKNGRELCRTLAYK 456 ++A K++ + E +A + L ++ + + + L RE Sbjct: 420 PRIISAYVNKLKAVYTEQDKAKARFEKLSTQTSDYDVNTLEQLQLERNEDRERYNGFVRS 479 Query: 457 TFEKIIIN 464 + +I + Sbjct: 480 FVKYVIAS 487 >UniRef50_Q02Q54 Possible recombinase n=1 Tax=Pseudomonas aeruginosa UCBPP-PA14 RepID=Q02Q54_PSEAB Length = 525 Score = 272 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 109/435 (25%), Positives = 175/435 (40%), Gaps = 39/435 (8%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 M A +Y+RFSS Q G S +RQR ++ +WL+ + + L + +EDLG S F G+H Sbjct: 1 MPSAFSYVRFSSGKQAKGSSEHRQRAMLGQWLEQHPSFTLSDLRFEDLGRSGFSGEHLDH 60 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 G + L AI+ G I G +LVE++DR+ R + E + I+ G+ VITL D VY Sbjct: 61 G-LGQLLAAIDSGAIKSGDVILVEAVDRIGRLEPLEMLPLFSRIVKAGVSVITLEDGHVY 119 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 + S+NE SL + Q+A+E S S R+ S+ +R+ A G + P WL+ Sbjct: 120 DRSSVNE-TSLFLLVAKIQQAHEYSNRLSRRINASYTARREKAKA-GLGIKRETPVWLTT 177 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 D + P I F+ + I + L + ++ FS + + + Sbjct: 178 DGQ-----LVPHVAPHIAQAFQDYADGLGERRICRKLRESGLEEFSKT----NATTVRRW 228 Query: 241 LANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLI 300 L NK IG ++I YP V+ LFY VQ+ + Sbjct: 229 LKNKTAIGYW-----------NDIPDVYPHVVDPALFYRVQQ----RLDAPKVDRAKPSA 273 Query: 301 NLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRR--LHRC-DRPSIKRDLVDYN----- 352 + L ++KC CG + R C + + ++D Sbjct: 274 HYLTGLVKCAVCGRNYNYKQRKHTDPAMLCTSRARLAGEGCSNSKTYPVIVLDQVRKLTS 333 Query: 353 --IINELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTAIAEKIRL 410 + + + S +++ A ++ +I EL KI AL I E + Sbjct: 334 LPFLQHAMESASSQADPSSQRLAV--IDGEIGELSRKIGEATKALLALGFTPEIQESLEQ 391 Query: 411 LDKELRRASVSLKTL 425 L TL Sbjct: 392 LKTAREALEEERATL 406 >UniRef50_UPI0001A445A7 hypothetical protein PcarcW_00494 n=1 Tax=Pectobacterium carotovorum subsp. carotovorum WPP14 RepID=UPI0001A445A7 Length = 584 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 127/506 (25%), Positives = 222/506 (43%), Gaps = 43/506 (8%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQR---RLIAEWLKVNSDYYLDTITYEDLGLSAFKGKH 57 M +Y+R+SS Q +G +L+RQ E+ +N ++ I D G+SAF+GK+ Sbjct: 1 MPLLYSYIRWSSDRQATGTTLDRQMASAASAKEFALLNGLELVEII---DPGVSAFRGKN 57 Query: 58 AQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDN 117 +SG +F+DA++ I + L VE+LDRL+R+ V A + +L+ G+ ++T D Sbjct: 58 TKSGKLGDFIDAVKERIIPDDSWLYVENLDRLTRQDVTTAQKLFIELLDLGLTLLTGMDK 117 Query: 118 TVYNIDSLNE-PYSLIKAILIAQRANEESEIKSSRVKLSWK---KKRQDALESGTIMTAS 173 VY ++S+N+ P L+ +IL+ RANEES+ K +R + + ++ + L Sbjct: 118 RVYTLESVNQNPTDLMISILMFSRANEESKTKQARTVGNVETLVERHKQGLPVNIKSCGK 177 Query: 174 CPRWLSLDDKRTAFV-PDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAW 232 P W+ + V P+ K ++ + + +YL++ +GKE W Sbjct: 178 HPFWIDDTGSQYEAVRQHPEYWKVAREAIDQFLQGHGIYKVKRYLDEKYPNGLNGKE--W 235 Query: 233 GPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDD-LFYAVQEIRLAPFGIS 291 V+++L N+ALIG G ++ GYYP + +D+ F +QE++ S Sbjct: 236 DYQVLKRLRENRALIGERTIKI---GNREHKLIGYYPSLCTDEVEFLKLQELKEQNGYKS 292 Query: 292 NSSKNPMLINLLRT--VMKCEACGNTMIVHAVSGSLHGYYVCPMRR--LHRCDRPSIKRD 347 K INLL +M+C CG TM G Y+C R C S+ Sbjct: 293 KKDKPSDSINLLSGLTLMRCSKCGGTMTGFLNRGKPR--YICLNGRHLQKGCVGWSVTSP 350 Query: 348 LVDYNIINELLFNCSKIQPVENKK--DANETLELK---IIELQMKINNLIVALSVAPEVT 402 LVD +I LL E + + + +E K I + I N+ +A+ + Sbjct: 351 LVDQCVITTLLIGYINTNRKEGQDTTELTKLIERKSNDINAINSSIANITLAIEKGANID 410 Query: 403 AIAEKIRLLDKELRRASVSLKTLK-SKGVNSFSDFYAIDLT--------------SKNGR 447 + +++++L + + LK K V + + + + R Sbjct: 411 QLIDRLKVLSSDRETIIKDVDKLKTRKTVIETKGSFELTIMEFMELIQWAVFVDITNESR 470 Query: 448 ELCRTLAYKTFEKIIINTDNKTCDIY 473 RT+ E +II+ + I Sbjct: 471 NKIRTVINDIIEYVIIDKTDGCITIK 496 >UniRef50_Q0F1R0 Recombinase n=2 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F1R0_9PROT Length = 491 Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 105/416 (25%), Positives = 194/416 (46%), Gaps = 17/416 (4%) Query: 51 SAFKGKHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGID 110 SA+KGK+A GA +F+ +E G++ G+ L++ESLDRLSR++V A+ +L+ G++ Sbjct: 2 SAYKGKNATEGALKDFIKLVEDGHVDKGSILILESLDRLSRQQVFTALGLFSSLLSAGVE 61 Query: 111 VITLCDNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIM 170 ++TL D Y +S+N+ L+ +++ R++EES +KS R+ SW+ KR+ A+E M Sbjct: 62 IVTLADGQHYTSESINDVGQLMFSLISMSRSHEESAVKSKRISASWENKRKLAVEFKRPM 121 Query: 171 TASCPRWLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKES 230 T CP+WL + R+ F R K I IF + IA LN+ V F+G + Sbjct: 122 TNQCPKWLRISKDRSCFKVIEARAKVIRCIFDQSIAGTGQRKIAAGLNERGVSTFNGGDM 181 Query: 231 AWGPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGI 290 W S I K++ +K++IG P + G I GYYP ++S+ +F Q R++ Sbjct: 182 -WHSSYIAKIIRSKSVIGEYQPKQKGEPIG-ESIPGYYPAIVSEGIFDKAQAARVSRINP 239 Query: 291 SN-SSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDR-PSIKRDL 348 S+ K NL + KC C +T + +G H + + C + Sbjct: 240 SSAGRKGEKFSNLFSGMCKCLECHSTFRM-IKNGRSHLFRCNSNYMGNGCKCVKRWRHRD 298 Query: 349 VDYN---IINELLFNCSKIQPVENKKDANET----LELKIIELQMKINNLIV--ALSVAP 399 V+ +I+E + S + + K E+ L K+++++ +++ +L+ Sbjct: 299 VENAALLVISEKIDWFSALGGHTSSKQKLESEVAILNAKLLDVEKQVSRFADLFSLAEGS 358 Query: 400 EVTAIAEKIRLLDKELRRASVSLKTLKSKG---VNSFSDFYAIDLTSKNGRELCRT 452 +T ++ + ++ +++ + ++ R Sbjct: 359 MMTDARKRYVKAMQSADGVRHDIEVKEAELRTFTPVQHNLDRLNRIIFELRSETDV 414 >UniRef50_B5WBE5 Resolvase domain n=1 Tax=Burkholderia sp. H160 RepID=B5WBE5_9BURK Length = 576 Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats. Identities = 116/542 (21%), Positives = 218/542 (40%), Gaps = 60/542 (11%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 K+ +Y+R S Q SG + RQ +W + + +++T DLG SAF+GK+ + G Sbjct: 11 KRLFSYLRISDVRQASGTGIARQIEGARKWALEHGFVFDESLTMRDLGKSAFRGKNTEMG 70 Query: 62 -AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 A F++ I+ G I G L VE+LDRLSR+KV +A+ L I+ HGI V+T D VY Sbjct: 71 SALGAFIEQIKSGRIEQGCVLYVEALDRLSRDKVVKAMNLLTTIIGHGITVVTGTDGNVY 130 Query: 121 NIDSLNE-PYSLIKAILIAQRANEESEIKSSRVKLSWKKK--RQDALESGTIM-TASCPR 176 N ++ E P L ++ + R N+ES +K RV+ + + K R E G + + P Sbjct: 131 NQQTIEENPGLLFVSVGMMVRNNDESRMKRDRVRDAMRIKCERWQKGERGIHLAVGADPS 190 Query: 177 WLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSV 236 W+ F + + + + E AI + L G S Sbjct: 191 WVQYSKDEKRFEIIEKHAEPVRAMIRYFREGHGGTAILERLRTDGYTAPKGIS---NTSR 247 Query: 237 IEKLLANKALIGI----CVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISN 292 + +++ + L+G + + + + + YYP ++++ F ++Q + Sbjct: 248 VYQIMRCRNLVGERLVTIMDKETQKVEYSATLKDYYPSLMTEAEFQSLQHLLDQRGRRHG 307 Query: 293 SSKNPMLINLLR--TVMKCEACGNTMIVHA----------VSGSLHGYYVCPMRRL--HR 338 L+NL +M+C C ++ H C +R Sbjct: 308 KG---TLVNLFTGAGLMRCGHCSRPVVAQNILSRNKQDDGRPQDGHRRLRCSGVTTMENR 364 Query: 339 CDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLELKII-------ELQMKINNL 391 C S V+ + N + + D ++ + ++ +L+ K+NNL Sbjct: 365 CAHGSCSAVPVERGV-MAFCANQFNLSALVEGNDPSKGIAGRLAIARGEQKKLERKMNNL 423 Query: 392 IVALSVAPEVTAIAEK------------IRLLDKELRRASVSLKTLKSKGVNSFSDFYA- 438 ++++ + + + ++ +E+ L +S V + + +A Sbjct: 424 TLSIADCEDDDDVQREFFQTEARSIGKTLKTTREEVAHLEQELAHAQSLSVPAAAGEWAK 483 Query: 439 ----IDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKHYPLMKVISAQQA 494 ++ + R R L TFE+I I + F + + P+ V+ ++ Sbjct: 484 LVHGVEALDHDARTTARRLVLDTFERITIFING------FRSVADGETPPIGLVLVSKAG 537 Query: 495 IS 496 IS Sbjct: 538 IS 539 >UniRef50_C7IHA5 Resolvase domain protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IHA5_9CLOT Length = 515 Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats. Identities = 91/506 (17%), Positives = 193/506 (38%), Gaps = 64/506 (12%) Query: 4 AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAF 63 A Y R+SS Q +S++ Q R I E+ + N Y Y D SA Sbjct: 3 AAIYARYSSDNQRE-ESIDAQVRAINEYAQRNG--YSIVKIYSDEARSATTDNRP----- 54 Query: 64 SEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNID 123 +FL ++ ++V LDR SR++ A + + + +G+ +I++ +N Sbjct: 55 -QFLQMMKDSATGLFNAVIVHKLDRFSRDRYDSAFYK-RQLKKNGVKLISVLENLD---- 108 Query: 124 SLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDK 183 + P S+I ++ A S + V K+ +G + P + Sbjct: 109 --DSPESIILESVLEGMAEYYSANLAREVMKGMKETALQCRHNG----GTPPLGYDVLPD 162 Query: 184 RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLAN 243 + ++ + + I IF++ S N I +N ++ SG+ ++G + + +L N Sbjct: 163 K-SYAINESEARIIRTIFEMYASGHSYNEIIDTMNREGYRSKSGR--SFGKNSLHDILRN 219 Query: 244 KALIGICVPSYRARG-------------KGISEIAGYYPRVISDDLFYAVQEIRLAPFGI 290 + G + + K I + P +IS +L+ V + ++ Sbjct: 220 EKYTGTYIFNRTVSKAGGKRNNHSSKSDKDIIRVENGMPAIISKELWNEVSK-KMIGNKR 278 Query: 291 SNSSKNPMLINLLRTVMKCEACGNTMIVHAV----SGSLHGYYVCPMRRLHR-CDRPSIK 345 + ++ + LL ++ C CG + + + +L+ Y C R+ R C SI+ Sbjct: 279 ARAANSAKETYLLSGLVFCGVCGGSFAGNRKFSGRNKNLYVTYECTTRKRKRTCCMKSIE 338 Query: 346 RDLVDYNIINELLFNCSKIQPVENKKD---------------ANETLELKIIELQMKINN 390 ++ ++ +I++LL + +E D E ++ +Q +INN Sbjct: 339 KNFIENLVIDQLLSDIFAPDAIERIADRLAEYAKTRTSEISKNIRDYENELAGIQTQINN 398 Query: 391 LIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNS------FSDFYAIDLTSK 444 + A++ ++ +K+ L+ ++ ++ K + + + D K Sbjct: 399 TVNAIANGMFHPSMKQKMDELEARKSALTIRIEEAKRQAEINSPSRDFIRSYLEQDSDIK 458 Query: 445 NGRELCRT-LAYKTFEKIIINTDNKT 469 N + + K+I+ D Sbjct: 459 NKSPEDQKRIIQTYVVKVIVYNDRID 484 >UniRef50_C7H883 Resolvase domain protein n=4 Tax=Faecalibacterium prausnitzii RepID=C7H883_9FIRM Length = 519 Score = 267 bits (682), Expect = 8e-70, Method: Composition-based stats. Identities = 83/493 (16%), Positives = 176/493 (35%), Gaps = 51/493 (10%) Query: 4 AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAF 63 A+ Y R+SS Q S+ Q R ++ + N TY D SA K F Sbjct: 3 AVIYARYSSDSQREA-SIEGQLRDCKDYAEKNG--ITVVGTYIDRAYSA---KTDDRPDF 56 Query: 64 SEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNID 123 I+ +LV LDR +R + +A+ + +G+ +++ + Sbjct: 57 QRM---IKDSGKKIFDVVLVWKLDRFARNRF-DAVNYKYQLEKNGVHLVSAMEPISQG-- 110 Query: 124 SLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDK 183 P ++ ++ A S + +V ++ +G ++ P ++ + Sbjct: 111 ----PEGIMVESMLIGMAEYYSAELALKVARGERENALQCKYNGGVV----PLGFTIGKE 162 Query: 184 RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLAN 243 + DP+ ++ IF IA LN+ ++ +GK + + ++ N Sbjct: 163 DRLYHIDPETAPIVQEIFSRYANGEPAEKIAASLNERGLRTRTGKP--FVKNSFFQIFRN 220 Query: 244 KALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLL 303 + IG R K I G P ++ DLF VQ+ + LL Sbjct: 221 RRYIGEY------RYKDIVT-PGGIPAIVDQDLFDRVQQRFEQNRIAHGRPAKEDVSYLL 273 Query: 304 RTVMKCEACGNTMIVHAVS---GSLHGYYVCPMRRLH---RCDRPSIKRDLVDYNIIN-- 355 T + C CG M + + G+ + YY C + H CD +I+++ ++ ++ Sbjct: 274 TTKLFCGKCGTLMGGESGTSHMGNTYYYYKCGKAKRHGKAHCDLKAIRKEPLERFVVETA 333 Query: 356 -------ELLFNCSKIQPVENKKDANET--LELKIIELQMKINNLIVALSVAPEVTAIAE 406 E++ + +++ L+ ++ + + ++ NL+ A+ + Sbjct: 334 IKVIFSDEIIERLIDLIMEAQQQENTRLPVLKEQLRDTEKRLANLLEAIEQGILTPTTKQ 393 Query: 407 KIRLLDKELRRASVSLKTLKSKGV---NSFSDFYAIDLT--SKNGRELCRTLAYKTFEKI 461 ++ L+ + + S+ + K + F+ E R + + Sbjct: 394 RLDELEAQKEALNTSILEEELKKPVLTREWIRFWLEKFRKGDVGSTEHQRQIIDTFVNSV 453 Query: 462 IINTDNKTCDIYF 474 + D + F Sbjct: 454 YVFDDRVVLNFNF 466 >UniRef50_C1D595 Recombinase n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D595_LARHH Length = 333 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 97/326 (29%), Positives = 151/326 (46%), Gaps = 11/326 (3%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 M K +Y RFS Q +GDS+ RQ+ EW + + +D G SAF G + ++ Sbjct: 1 MPKVYSYKRFSHVAQATGDSIRRQKDKTQEWADKHGYVIDTELQLDDRGKSAFDGTNLRT 60 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 GA +FL G I G+ L +E DRL+R + +A L ++ GI V+T+ D +Y Sbjct: 61 GALGQFLTLAREGKIEKGSILAIEVFDRLTRAEPMDAFNLLNDLVQCGISVVTVSDGRLY 120 Query: 121 NIDSLN-EPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 + +LN + +L+ A ++ R +EES KS ++ + K+R E + + P WL Sbjct: 121 DSKTLNRDLTALMMAAVMLVRGHEESRRKSEMLQGHYAKRR---AEEASKIGHVPPGWLR 177 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLN-DHAVKNFSGKESAWGPSVIE 238 V P+ T+ IF+L + IA+ N + V K W PS + Sbjct: 178 PTANGWELV--PEHAATVMEIFELAAKGIGATVIARRFNTEKRVVPSRRKSKGWYPSRVS 235 Query: 239 KLLANKALIGICVPSYRARGKGI---SEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSK 295 KLL K++IG K I I YYP I+++LF+ VQ + L+ Sbjct: 236 KLLRAKSVIGEYQAFVMDGVKMIPVGPPIPNYYPAAITEELFWKVQSL-LSQRAPKGRRT 294 Query: 296 NPMLINLLRTVMKCEACGNTMIVHAV 321 + N L ++KCE CG T + Sbjct: 295 DGGYRNFLAGMLKCEYCGGTFTLDKK 320 >UniRef50_C2F160 Recombinase n=2 Tax=Lactobacillus reuteri RepID=C2F160_LACRE Length = 517 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 95/495 (19%), Positives = 186/495 (37%), Gaps = 50/495 (10%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 + AY R S+ DSL Q+ +++ ++ L I Y D G+S K ++ Sbjct: 19 QVAAYCRVSTNSDEQEDSLANQQDHFKSYIQQQPNWLLHKIYY-DNGISGTKAQN--RPG 75 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 L ++G + +L +S+ R SR + + ++ + I VI +N N Sbjct: 76 LQALLKDCQNGQV---DLVLTKSISRFSRNT-TDCLRIIRQLKQLDIPVIFEKEN--INT 129 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 DS++ + ++ A +ES+ + V+L ++++ +G + P D Sbjct: 130 DSMDSE---LILSVLGSLAQDESQSIAHNVRLGYQQRA----SNGVFHYSLPPYGYQKDA 182 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 R + DP K + IF +E +S IA+ LN+ A+ + W S I +L Sbjct: 183 NRD-LIIDPIERKVVLRIFNWTIEGKSPGQIAQTLNEQAISTK--RNGKWHDSTIRGILQ 239 Query: 243 NKALIG-----------ICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGIS 291 N +G +G I ++P +I F VQ+I + Sbjct: 240 NTVYLGTTEFQKTFTDDEYHRHPNQGEQGKIIIEEHHPAIIDQATFTQVQKIIMLKRKFY 299 Query: 292 NSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRD---L 348 +K + + C C + SG + ++ C SI+ D L Sbjct: 300 PQAKAKPQRHTFSRKIYCGNCQKLFKRQSRSGKVCWGCQTHIKSAKDCPVKSIREDALHL 359 Query: 349 VDYNIINELLFN--------CSKIQPVENKKDANE--TLELKIIELQMKINNLIV-ALSV 397 ++N+L+F+ ++Q +N++ A + +E ++ E + K +NL Sbjct: 360 AFCTMVNKLIFSQKFLLEPLVEQLQADQNQEQAAKLSQVETELKEAKDKQDNLQQLRKQE 419 Query: 398 APEVTAIAEKIRLLDKELRRASVSLKTLKS------KGVNSFSDFYAIDLTSKNGRELCR 451 E ++ L++E+ ++ LK + + + S Sbjct: 420 LIEKDFFTKQDAELEQEIANLQSEIERLKQLLGDQNSKLPLTHELLKLCQRSNYLTAFNA 479 Query: 452 TLAYKTFEKIIINTD 466 L + E I ++ D Sbjct: 480 ELFEQIIESITVDQD 494 >UniRef50_A7MFZ6 Putative uncharacterized protein n=1 Tax=Cronobacter sakazakii ATCC BAA-894 RepID=A7MFZ6_ENTS8 Length = 600 Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats. Identities = 129/524 (24%), Positives = 227/524 (43%), Gaps = 52/524 (9%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHA-QS 60 +K +Y R+SS Q G + RQ + E+ + N L+ D G+S FK ++ +S Sbjct: 3 QKLYSYQRWSSALQADGTTKARQTKAAEEYAQRNG---LEIEEIVDAGVSGFKSANSDES 59 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 GA +FL A++ G I L VESLDR++R+++ A+E IL GI ++T DN VY Sbjct: 60 GALGQFLRAVDEGLIARNAVLFVESLDRITRDEIDTALELFLGILRRGITIVTGMDNKVY 119 Query: 121 NIDSL-NEPYSLIKAILIAQRANEESEIKSSRVKLS----WKKKRQDALESGTIMTASCP 175 +++ P L+ +IL+ RA+EES+ K +R + + + L S P Sbjct: 120 TREAIKGNPVDLLTSILMFSRAHEESKTKQNRTNGNALALIDRFIKQGLPVNIKSVGSHP 179 Query: 176 RWLSLDDKRTAFV-PDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGP 234 W+ V P P +L ME S+ + + LND + GK AW Sbjct: 180 WWIDDSGSMYEAVKPHPVLWACAQLAMDKFMEGISVFKVTQMLNDRFPHYYKGK--AWAM 237 Query: 235 SVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSS 294 + + KL NKA+ G+ S + + YYP +IS+ F +Q+IR I Sbjct: 238 ANVRKLRLNKAVYGVREISVGGK---TYVLTDYYPALISEGQFLRLQQIRTTTKYIGKVG 294 Query: 295 KN---------------PMLINLLRT--VMKCEACGNTMIVHAVSGSLHGYYVCPMRRL- 336 + INLL + +C CG TM+ ++ Y+C R Sbjct: 295 EGRVVTDSEGNSKVIAERNNINLLSGMKLFRCGHCGGTMMAMRHGDTIR--YLCEKGRGY 352 Query: 337 -HRCDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLELKIIELQMKIN------ 389 H C S+ LV++ ++ L+ + I+ + + A +I ++ IN Sbjct: 353 HHDCKTWSLPGILVEHTLM--LVTTIAYIELQQKGQGAKADYTQQINAMESTINGYSTQI 410 Query: 390 NLIVALSVA---PEVTAIAEKIRLLDKELRRASVSLKTLKSKGV---NSFSDFYAIDLTS 443 N L++A +V +AE I+ L + A + L+ L+ K + +S + +D + Sbjct: 411 NKATKLAIALDDVDVDELAETIKELKAKRDNAIIELEVLQRKQLLANDSTFETIMMDFFT 470 Query: 444 KNGRELCRTLAYKTFEKI--IINTDNKTCDIYFMNGIVFKHYPL 485 + + ++ K+ ++ + + + +F + + Sbjct: 471 YAQYGVLQDPVHEYRSKLRDVVYSAISDVRAWKHDRRLFISFQI 514 >UniRef50_C7H8A3 Resolvase domain protein n=22 Tax=Clostridia RepID=C7H8A3_9FIRM Length = 529 Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats. Identities = 83/493 (16%), Positives = 175/493 (35%), Gaps = 51/493 (10%) Query: 4 AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAF 63 A+ Y R+SS Q S+ Q R ++ + N TY D SA K F Sbjct: 3 AVIYARYSSDSQREA-SIEGQLRDCKDYAEKNG--ITVVGTYIDRAYSA---KTDDRPEF 56 Query: 64 SEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNID 123 I+ +LV LDR +R + +A+ + +G+ +++ + Sbjct: 57 QHM---IKDSAKKIFDVVLVWKLDRFARNRY-DAVNYKHQLEKNGVHLVSAMEPISQG-- 110 Query: 124 SLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDK 183 P ++ ++ A S + +V ++ +G ++ P ++ + Sbjct: 111 ----PEGIMVESMLIGMAEYYSAELALKVARGERENALQCKYNGGVV----PLGFTIGKE 162 Query: 184 RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLAN 243 + DP+ ++ IF + IA LN+ ++ +GK + + ++ N Sbjct: 163 DRLYHIDPETAPIVQEIFTRYADGEPAEKIAASLNERGLRTRTGKP--FVKNSFFQIFRN 220 Query: 244 KALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLL 303 + IG R K I G P ++ DLF VQ+ + LL Sbjct: 221 RRYIGEY------RYKDIVT-PGGIPAIVDKDLFDRVQQRFEQNKIAHGRPAKEDVSYLL 273 Query: 304 RTVMKCEACGNTMIVHAVS---GSLHGYYVCPMRRLH---RCDRPSIKRDLVDYNIIN-- 355 T + C CG M + + G+ + YY C + H CD +I+++ ++ ++ Sbjct: 274 TTKLFCGKCGTLMGGESGTSHMGNTYYYYKCGNAKRHGKAHCDLKAIRKESLERFVVETA 333 Query: 356 -------ELLFNCSKIQPVENKKDANET--LELKIIELQMKINNLIVALSVAPEVTAIAE 406 E++ + +++ L+ ++ + + ++ NL+ A+ + Sbjct: 334 IKVIFSDEIIERLIDLIMEAQQQENTRLPVLKDQLRDTEKRLANLLEAIEQGILTPTTKQ 393 Query: 407 KIRLLDKELRRASVSLKTLKSKGVNSFSD-----FYAIDLTSKNGRELCRTLAYKTFEKI 461 ++ L+ + S+ + K + F E R + + Sbjct: 394 RLDELEARKEALNTSILEEELKKPVLTREWMRFWFEKFRKGDVGSTEHQRQIIDTFVNSV 453 Query: 462 IINTDNKTCDIYF 474 + D + F Sbjct: 454 YVFDDRVVLNFNF 466 >UniRef50_B0T614 Recombinase n=1 Tax=Caulobacter sp. K31 RepID=B0T614_CAUSK Length = 571 Score = 265 bits (676), Expect = 4e-69, Method: Composition-based stats. Identities = 115/454 (25%), Positives = 194/454 (42%), Gaps = 37/454 (8%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 KA +Y RFSS Q GDSL RQ + +W + + DLG+SA+ G H GA Sbjct: 4 KAYSYARFSSKAQAEGDSLRRQLKAAFDWADKHGLQLD--TRHRDLGVSAYTGAHRVKGA 61 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 + F+ ++E G I G+ LLV+S+DRLSRE E + L + +GI V+ L +N V + Sbjct: 62 LASFIRSVEDGEITRGSYLLVDSMDRLSRESETEVLHLLLTLTRNGIKVVNLAENHV--L 119 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWL---- 178 D E I+ ++ A R+N ES K +V L + ++ A E G + +AS P WL Sbjct: 120 DEKAEFTDYIRVLIHASRSNAESVEKGRKVGLKRAENKRLAREEGKVWSASGPGWLEAIV 179 Query: 179 --SLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSV 236 + ++ + +R + ++++F AI + LND K+F + W +V Sbjct: 180 TGTKPNRHIEWKVIKERKQVVQMMFDFAEAGLGTVAITQRLNDEGYKSFR-YDRPWQQTV 238 Query: 237 IEKLLANKALIGICVPSY-------RARGKGISEIAGYYPRVISDDLFYAVQEIRLAPF- 288 + +L N+A+IG P + R I+GYYP +I + F+ VQ I A Sbjct: 239 VLDMLRNRAVIGEYQPKFATSGSNSYNRPNDGDPISGYYPEIIKPEQFHRVQAIIGARKP 298 Query: 289 GISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGS-----LHGYYVCPMRRLHR----- 338 S+ + + NL + C CG T+ +H V + C + Sbjct: 299 KQGRSAGSKVFNNLFIGLGSCHECGGTVGIHVVKAKAEGRAEYQALRCINSARNAIGSTN 358 Query: 339 ----CDRPS-IKRDLVDYNIINEL-LFNCSKIQPVENKKDANETLELKIIELQMKINNLI 392 C + ++ +I+ + + + N++ +L K+ NL+ Sbjct: 359 VNNVCTNRTRYSYRKLEASILAHVGSYKIPNSKSGRNRESDLADAIAMRDDLAKKVENLL 418 Query: 393 VALSVAPEVTAIAEKIRLLDKELRRASVSLKTLK 426 + + + +L + LK Sbjct: 419 DLVEDGNR--GMVARYNERVTQLEAQEAEVAKLK 450 >UniRef50_A7VSK4 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VSK4_9CLOT Length = 490 Score = 262 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 97/508 (19%), Positives = 181/508 (35%), Gaps = 62/508 (12%) Query: 1 MKKAIAYMRFSSPGQM---SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKH 57 M+ A Y+R S S++ QR + ++ + N + Y D G + G + Sbjct: 2 MEPAALYLRLSQEDGERWGESQSISNQRIFLTQYCQANG--FTVAECYIDDG---YTGTN 56 Query: 58 AQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDN 117 F L IE G I T++ + L RL R+ + GI I + D Sbjct: 57 FNRPGFQRLLRDIERGKIK---TVITKDLSRLGRDYIETGRYVECYFPEKGIRYIAVNDG 113 Query: 118 TVYNID-SLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPR 176 + S S KA+ A + S +V+ + KR+ +G + A P Sbjct: 114 VDTGKEESAGNDMSAFKAVFNDFYARD----VSRKVRSALTAKRR----AGEFIGAWAPY 165 Query: 177 WLSLDDKR-TAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESA---- 231 D K+ VPDP+ + I++ ++ S+ IA+ L + + K S Sbjct: 166 GYQKDPKQPGKLVPDPESAGVVRRIYRDFLKGESVRGIAEGLTEDKIPTPMEKRSGGLKA 225 Query: 232 ---WGPSVIEKLLANKALIGICVPS------YRARG------KGISEIAGYYPRVISDDL 276 W S I ++L + G + Y+ + K ++ + +I+ + Sbjct: 226 QRRWNESTIRRILTCETYAGNLTQNQSKTISYKVKKRIPVPKKEWIVVSNTHEPLITKEE 285 Query: 277 FYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRL 336 F Q++ F +S + P +LL ++ C CG+ M V Y VC R Sbjct: 286 FQMAQQL----FKTRSSPREPKDRHLLSGLVFCGDCGSPMTF--VKDGPRTYLVCSSSRR 339 Query: 337 --HRCDRPSIKRDLVDYNIINELLFNCSKIQPV----ENKKDANETLELKIIELQMKINN 390 C ++ D V+ +++ L IQP E + + E ++ + ++ Sbjct: 340 YPGSCKTHCVREDEVERTLLDSLRKLSEGIQPQSLYPEFPRKSRELAARELRSAKEQLEF 399 Query: 391 LIVALSVAPEVTAIAEKIRLL----DKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNG 446 A + I + +++ L + + + Sbjct: 400 YRRAGRDSENFPNIQRQFLSYCELWQRKVDALEEELTAEDPQDRREMAARELLRFERP-- 457 Query: 447 RELCRTLAYKTFEKIIINTDNKTCDIYF 474 RT +KI++ D K+ ++YF Sbjct: 458 ---GRTTIQALVKKIVVCGD-KSLELYF 481 >UniRef50_C9QGK9 Recombinase n=1 Tax=Vibrio orientalis CIP 102891 RepID=C9QGK9_VIBOR Length = 528 Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats. Identities = 115/470 (24%), Positives = 204/470 (43%), Gaps = 31/470 (6%) Query: 4 AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAF 63 AI Y RFSS Q+ DS+NRQ ++ + ++ L Y DLG+SA+K Sbjct: 24 AILYSRFSSRNQVGNDSINRQLEGAQKFCEYHN-LKLSEANYSDLGISAYKDN--VREGL 80 Query: 64 SEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNID 123 L+A+ G I + +L + RLSR+ ++ + ++ G T+ DN VY+ Sbjct: 81 ELLLNAVRDGTIPANSWILCHTTCRLSRKGFQHVLKLVSELVATGCKFCTINDNQVYDST 140 Query: 124 SLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDK 183 ++N+ S + I+ A A ESE KS +K + ++ R++ + P W++L D Sbjct: 141 NINKLSSALPLIISADLAFSESEKKSLMIKHAKEQTRKN-----RKIVGKQPYWITLQDG 195 Query: 184 RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLAN 243 + ++ I LR++ S IAK LN + +GK +WG + I K + N Sbjct: 196 KPMLNDFST---IVKTIIDLRLKGYSAQRIAKQLNADGHLSPTGK--SWGAAAIRKTIDN 250 Query: 244 KALIGICVPSYRARGK--GISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLIN 301 L G S GK + + YP + S ++ ++ + S +P Sbjct: 251 HVLYGAKEYSEMKDGKLVPVEIVEDLYPALCSKSIWLQIKYEKGTKEVGKRSKSSP---- 306 Query: 302 LLRTVMKCEACGNTMIVHAV--SGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINELLF 359 +++C CG+ M + G + Y VC CD+ S RD +D I+ EL Sbjct: 307 -FSKLLRCACCGSAMTTRSTYQKGVKYDYRVCIRSTEGSCDQKSRFRD-LDNIILGELKH 364 Query: 360 NCSKIQPVENKK-DANETLELKIIELQMKINNLIVALSVAPEVTAIAEKIRLLDKELRRA 418 +++ + D+ + + K+ L + L+ S + AI I ++EL A Sbjct: 365 LKYEVKTHATVEVDSIKVFQDKLTLLN-QTKELLQ--SNPTALAAIYADIAKTEQELHEA 421 Query: 419 SVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNK 468 + + L+S+ N + +D+ ++ R L + E I + +K Sbjct: 422 KRTKELLESQP-NEVNFQAIVDVEDQSQR---NVLLRRIIESIEVKRIDK 467 >UniRef50_C0ZHM9 Putative DNA recombinase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZHM9_BREBN Length = 482 Score = 261 bits (667), Expect = 4e-68, Method: Composition-based stats. Identities = 99/491 (20%), Positives = 186/491 (37%), Gaps = 50/491 (10%) Query: 3 KAIAYMRFSSPGQM-SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 + Y+R S+ Q G S+ QR + ++ +S + Y D G+SA K + Sbjct: 2 RTAIYIRVSTEDQAREGFSIPAQREKLLSYV--HSQGWEVQAVYADEGVSA---KDTKRP 56 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 A S+ L I G I +LV LDRL+R V + + L+ H + + + Sbjct: 57 ALSQLLQDIRTGEI---DVVLVYRLDRLTRS-VLDLYQLLQEFDRHAVHFKSCTE----V 108 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 D+ L L+A A E E + RVKL + ++ G P +L Sbjct: 109 YDTTTAIGRLFIT-LVAALAQWERENLAERVKLGMSQMARERKRPG----GPAPFGYNLV 163 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 + V + + +F+ S IA++ N ++ +G ++W S + +LL Sbjct: 164 --QGTLVVNQREASGVRSMFERYDRGESPRQIAEWANHSGLRGKNG--ASWSASAVLRLL 219 Query: 242 ANKALIGICVPSYRARGKGISEIAGY------YPRVISDDLFYAVQEIRLAPFGISNSSK 295 N G +Y + ++ + +P +I F VQ + ++ + Sbjct: 220 KNPVYHGALRWNYTDADQQRNDPEEWIIEEATHPAIIDQACFSRVQ--KRMSARGTSHPR 277 Query: 296 NPMLINLLRTVMKCEACGNTMIVHAV-------SGSLHGYYVCPMRRLHRCDRPSIKRDL 348 L ++ C CG++M H YY+C + CD P+I+ D Sbjct: 278 VLSSRYLFSGLLYCSRCGSSMRGKTTTITGKGEKRYTHRYYLCKNKLAGTCDAPAIREDR 337 Query: 349 VDYNIINELL----FNCSKIQPVENKKDANETLELKI--IELQMKINNLIVALSVA-PEV 401 ++ ++ EL+ + + +Q V + + K ELQ++ A + Sbjct: 338 LEKAMVQELMQHSPESIAALQEVVQTLFQSNSCSAKETGQELQLRKQRWEQAYEEGFLSL 397 Query: 402 TAIAEKIRLLD---KELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTF 458 + EKI L+ KE R ++ ++ S++ I S + R L Sbjct: 398 ADLREKINTLERAAKERERTYSVFSSVDQFDPDALSNWNLI--WSYANEKERRLLVCMLI 455 Query: 459 EKIIINTDNKT 469 +++ + + Sbjct: 456 QRVEVEATDAA 466 >UniRef50_UPI0001C355EF site-specific recombinase n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C355EF Length = 545 Score = 259 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 92/505 (18%), Positives = 183/505 (36%), Gaps = 62/505 (12%) Query: 3 KAIAYMRFSSPG--QMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 +A AY+R S ++ DS+ QR LI +L D L +D + G Sbjct: 11 RADAYLRLSKEDGDKVESDSIANQRDLIRHFLADKPDIQLVDEQIDD----GYSGATFDR 66 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 +F + ++ ++ G I ++V+ L R R V ++ +G+ I + DN Sbjct: 67 PSFQKMMEDVKSGKI---NCIIVKDLSRFGRNFVEAGRYIDQIFPEYGVRFIAINDNFDS 123 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 L+ + + A R +L K+K+ D + S + +L Sbjct: 124 AKGRSQSDNVLLPFLNLVNDAFCRDISIKVRSQLEVKRKKGDFVGSFAVYG-----YLKD 178 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFS-------------- 226 D R + D + IFK +++ S IA LN+ + + Sbjct: 179 PDNRHKLIVDEFAANVVRDIFKWKIDGLSQQRIADRLNELGILSPMEYKKNCGMAYRTGF 238 Query: 227 --GKESAWGPSVIEKLLANKALIGICVPSYRA----RGKGISE--------IAGYYPRVI 272 ++ W + ++L N+ IG V R + K E I + ++ Sbjct: 239 QVSTKAKWTAVAVGRILRNEFYIGTLVQGKRTTPNHKVKKTIEKPNNEWVRIENNHEPIV 298 Query: 273 SDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHA--VSGSLHGYY- 329 + + F AV + L ++ + ++L ++ C CG M+ + +G + YY Sbjct: 299 TIEEFSAVGRLLLQDTRVA---PDQNTVSLFSGLIFCGDCGQNMVKNGVCKAGKTYSYYM 355 Query: 330 VCPMRRLHRCDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLELKIIELQMKIN 389 C R C I V +++ L + S + +E + L L+ E+Q Sbjct: 356 CCTNRAKKGCSSHRIPEQAVADSVLMSLKEHISTVLEIEKTLEFLAGLPLQRAEVQKADA 415 Query: 390 NLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGREL 449 L+ E+I+ +K +L + G+ S++ + + Sbjct: 416 RLVSK----------QEEIKRYEK----LKATLYEALADGLIDKSEYLELKAVYDKKMQE 461 Query: 450 CRTLAYKTFEKIIINTDNKTCDIYF 474 R+ K +++ N++ + + Sbjct: 462 ARSEEVKVKDELESILQNQSVNSQW 486 >UniRef50_UPI00016C51D7 putative integrase/recombinase n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C51D7 Length = 457 Score = 259 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 104/430 (24%), Positives = 188/430 (43%), Gaps = 34/430 (7%) Query: 80 TLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDSLNEPYSLIKAILIAQ 139 L++E LDRLSR+K+ +++ + IL G D+ ++ + +Y DSLN+P L+ I Sbjct: 1 MLILEDLDRLSRDKIMASVDVARKILEQGCDLFSVIEYRLYTKDSLNDPMGLMGLIWRFY 60 Query: 140 RANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDKRTA--------FVPDP 191 A+EES+ K+ R + +W +K + A E G + + CP WL + D++ F P Sbjct: 61 LAHEESQKKAVRSRENWTEKHRQAAE-GKVFSKICPGWLKVVDQKKKNNRVTGGRFEEIP 119 Query: 192 DRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLANKALIGIC- 250 +RV+ + +F+ +E L +I + L + V F S W I +L ++ ++G Sbjct: 120 ERVELVRKLFRWCIEGHGLQSIMRRLLEEKVPPFR---SGWAQKYIWDILRDRRVLGELP 176 Query: 251 VPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCE 310 + + K I GYYP +I + + A Q+ G + +NL +++ Sbjct: 177 TQIHGEKVKPGPAIPGYYPPIIDEKTYRAAQDAMKLRSGKQ--GRKGDFVNLFTGLVRYP 234 Query: 311 ACGNTMIV----HAVSGSLHGYYVCPMRRLHRCDRP--SIKRDLVDYNIINELL-FNCSK 363 M+ H Y + + P +++ + + +++ L S Sbjct: 235 EHDCNMVFISKPKTNKSGKHNYRYLVSYLGWKKEHPYVAVRYERFESVVLHWLYELKASD 294 Query: 364 IQPVENKKDANETLELKIIELQMKINNLIVALSV-APEVTAIAEKIRLLDKELRRASVSL 422 + P EN++D ETL+ + L+ +I N+ L EV A+ K+ + E R + + Sbjct: 295 LLPQENQEDGIETLKAQRKFLEERIKNIADQLDQLGAEVPAVMAKLAEMQVEKTRLTNEI 354 Query: 423 --KTLKSKGVNSFSDFYAIDL-------TSKNGRELCRTLAYKTFEKIIINTDNKTC--D 471 K+ + N +DL K RE R EKI ++ ++K Sbjct: 355 EEKSRQQTRPNIEDTKALVDLMKSKSGSELKELREQVRQRLLMHLEKIEVSVEDKRVFLT 414 Query: 472 IYFMNGIVFK 481 I +G V K Sbjct: 415 IRLHSGTVRK 424 >UniRef50_UPI0001C37799 recombinase n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37799 Length = 517 Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats. Identities = 95/496 (19%), Positives = 186/496 (37%), Gaps = 58/496 (11%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 + + Y RFSS Q + +S++ Q R + ++ K ++ TY D SA Sbjct: 5 IHRVAQYARFSSDNQRT-ESIDAQLRAMNQFCKQ--QHWQVVATYTDEARSATTD---NR 58 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 F + + G +LV LDR SR++ AI + K + + + + ++ + Sbjct: 59 PQFQQMIADSGKGIF---DIVLVHKLDRFSRDRYDSAIYK-KRLKKNNVQLCSVLERID- 113 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 + P S++ ++ A S V K+ +G P + Sbjct: 114 -----DSPESIMMESVLEGMAEYYSRNLGREVMKGMKETALQCKHTG----GCPPLGYDV 164 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 + R V + + ++ IF++ E +AIA YLN+H G + + + ++ Sbjct: 165 GEDRK-LVVNQHEAEAVKAIFEMFAEGYGYSAIADYLNEHGYTTKRGH--IFAKNSLYEI 221 Query: 241 LANKALIGICVPSY---RARGK----------GISEIAGYYPRVISDDLFYAVQEIRLAP 287 L N+ G+ V + ++ K I + G P +IS LF VQ I+ A Sbjct: 222 LKNEKYTGVFVFNRAAAKSDSKRNNHAYKTSDNIIRVPGGCPAIISKHLFEKVQRIKAAN 281 Query: 288 FGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRR---LHRCDRPSI 344 + + LL + C CG + + +C R C Sbjct: 282 RR-NTGRYHSKEFYLLTGKVFCGVCGKRIQGNLRFSGERKNRLCTYRCDEPKQICKNKEN 340 Query: 345 KRDLVDYNI---INELLFNCSKIQPVENK------------KDANETLELKIIELQMKIN 389 +D +D + + + +FN + ++ N + E+++ ++ E+ + ++ Sbjct: 341 NKDYLDAYVADLLRQKIFNKAALRRRINAVNKYIESYNAEFDEHYESIKTELDEVTVALS 400 Query: 390 NLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGR-- 447 N+ VA+ AI E+ L++ L L+ D+ + KN + Sbjct: 401 NITVAVEKGVLTDAIIERSEALEQRKSEIQAQLAELRRFEPLRLEDYLHLIDDYKNMQRN 460 Query: 448 -ELCRTLAYKTFEKII 462 E RT +K++ Sbjct: 461 TEEFRTFVQTYIDKVV 476 >UniRef50_Q3Z6A0 Resolvase domain protein n=6 Tax=Dehalococcoides RepID=Q3Z6A0_DEHE1 Length = 554 Score = 258 bits (658), Expect = 4e-67, Method: Composition-based stats. Identities = 94/484 (19%), Positives = 178/484 (36%), Gaps = 53/484 (10%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 K Y R SS Q S+ Q R + ++ N+ Y T + D A G+ A Sbjct: 16 KVALYARVSSEAQDVELSIAAQLRALRDYAGKNN--YQITYEFIDE---AESGRTAARPE 70 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F + + I P +LV L+R +R + +L L+ GI VI++ + Sbjct: 71 FKRMIAMSKSS-IPPFEAILVWKLNRFARNRADSITYKL-LLQKKGIKVISINEPLD--- 125 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL-- 180 + P + +I S +K K+ +G + P L Sbjct: 126 ---DSPTGKLMEGIIESLDEFYSANLGQDIKRGMKENALRGFYNG----SQPPLGYELVK 178 Query: 181 ----DDKRTAFVPDPDR---VKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWG 233 +R P+ D VKT+ IF L + + IA LN +GK WG Sbjct: 179 VKDGPKQRNKLAPEADTSPGVKTVRYIFALADKGKGCKEIANILNREEYITKAGKP--WG 236 Query: 234 PSVIEKLLANKALIGICVPSYR-----ARGKGISEIAGYYPRVISDDLFYAVQEIRLAPF 288 + + K+L N+A G V R A+ + + +P +I + F +Q+ ++ Sbjct: 237 RTTVHKILCNEAYTGTLVWGARPSQGLAKNEEAVRLENAWPGIIDKETFQRIQQSMVSRQ 296 Query: 289 GISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHR---CDRPSIK 345 + + LL + C CG + H+ + YY C + C+ +I Sbjct: 297 PKNTHPRTVPSQYLLSGMAFCS-CGAALTGHSAKSGQYAYYQCNRKFKQGNGVCNCQAIP 355 Query: 346 RDLVDYNIINELLFNCSKIQPVEN---------------KKDANETLELKIIELQMKINN 390 + ++ +I ++ + +E K+ L+ ++ +++ ++N Sbjct: 356 KTKLESAVIKQIKSKVLTEENLEELVKQVNEELESTSSHHKEKLAVLDAELDDIRQRLNR 415 Query: 391 LIVALSVAP-EVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGREL 449 L A+ +A +IR L + + S +++ V D + + + +L Sbjct: 416 LYEAIESGKLNYDDLAPRIRELRERQSKLEKSRVLAEAEMVADSDDNFNLGMVKAYANDL 475 Query: 450 CRTL 453 + L Sbjct: 476 KQLL 479 >UniRef50_C7HAC5 DNA integration/recombination protein n=4 Tax=Faecalibacterium prausnitzii RepID=C7HAC5_9FIRM Length = 528 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 93/498 (18%), Positives = 198/498 (39%), Gaps = 57/498 (11%) Query: 4 AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAF 63 A+ Y R+S+ Q +S+ Q R + + N + Y D +SA K F Sbjct: 3 AVIYARYSTDSQRE-ESIEGQIRECTAYAEKNG--FTVVKHYIDRAVSA---KTDNRPQF 56 Query: 64 SEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNID 123 + + E G ++V LDR +R + A + + + +G+ +++ + + Sbjct: 57 QQMIKDSERGIF---DVIIVWKLDRFARNRYDSARYKTQ-LKRNGVKLVSATE-----VI 107 Query: 124 SLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDK 183 S +++++L A S S +V + + +G + P +D+ Sbjct: 108 SAGPEGIILESVLEG-YAEYYSADLSEKVVRGMTENALKGIYNG----GTIPFGYMIDET 162 Query: 184 RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLAN 243 R + PDP +E F+ + ++ + +L H +KN G E + I+++L+N Sbjct: 163 RH-YQPDPLLAPYVEQTFQKYADGATMTDLRDWLKAHNIKNSMGGE--MSYNTIQRMLSN 219 Query: 244 KALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLL 303 + IG + P ++S++LF VQ+ +LA + + I LL Sbjct: 220 RRYIGELRLRDVVQ-------PNAIPALVSEELFNKVQK-KLAKNKKAPARHKAEEIYLL 271 Query: 304 RTVMKCEACGNTMIVHAV---SGSLHGYY-VCPMRRLHRCDRPSIKRDLVDYNIINELLF 359 T + C CG M + +G ++ YY ++ CD+ ++++ ++ ++NE + Sbjct: 272 TTKLYCGKCGALMFGESGVSHTGKMYTYYKCAAAKKKKTCDKKAVRKQWLEDLVVNETMK 331 Query: 360 NCS----------KIQPVENKKDA-NETLELKIIELQMKINNLIVALSVAPEVTAIAEKI 408 K+ ++N++ E ++ E ++ I N++ A+ + ++ E++ Sbjct: 332 LVEDDASMNAIIVKVMELQNQESTDLPIYEKQLKETEVGITNMLNAIQMGILTSSTKERL 391 Query: 409 RLLDKELRRASVSLKTL---KSKGVNSFSDFY-----AIDLTSKNGRELCRTLAYKTFEK 460 L+ + + + K K F F+ +D+T R + L Sbjct: 392 EALEDQRKELQARIAEERLAKPKMKEEFVRFWLLRFRKLDMTQPEQR---QALVDTFINA 448 Query: 461 IIINTDNKTCDIYFMNGI 478 I + D + G Sbjct: 449 IYLYDDKVLITFNYKEGT 466 >UniRef50_A5FSM5 Resolvase, N-terminal domain n=2 Tax=Dehalococcoides RepID=A5FSM5_DEHSB Length = 517 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 86/516 (16%), Positives = 181/516 (35%), Gaps = 47/516 (9%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 KK Y R SS Q S++ Q + I E+ K N Y + D A G+ Sbjct: 6 KKVAIYARVSSDKQDVDLSISAQLKAIREYAKNNG--YEVVREFVDE---AETGRTTARP 60 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 AF E + H P +LV R +R + + + ++ + VI++ + Sbjct: 61 AFREMISLARHPQ-KPFDVILVWKYSRFARSREDSIVYKA-MLRKSEVHVISINEPFD-- 116 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL- 180 + P + +I S+ V + ++ G +++ P Sbjct: 117 ----DTPTGRLLEAIIESLDEFYSDNLGEEVTRGMR----ESAARGFYLSSKPPYGYRKV 168 Query: 181 -----DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPS 235 + + T +P++ + +F ++ + L IAK LN + + GK WG + Sbjct: 169 RFKDGEKEHTKLEIEPNQAGIVSSMFTDALKGKGLTEIAKELNHKGIASPRGK--GWGKT 226 Query: 236 VIEKLLANKALIGICVPSYRA-RGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSS 294 + +++N+A G V + RG + P +IS +F Q++ Sbjct: 227 AVRTIMSNEAYAGSFVWGRNSKRGLAPIRVENACPAIISRQVFDNAQKLIRERAPKLTHP 286 Query: 295 KNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVC---PMRRLHRCDRPSIKRDLVDY 351 K LL C CG MI + YYVC + C + Sbjct: 287 KRTCSRFLLSGFTFCSHCGKAMIGQDAKSGKYSYYVCGTLNKKGAGSCPSHYFNSRSFEE 346 Query: 352 NIINELLFNC------SKIQPVENKK---------DANETLELKIIELQMKINNLIVALS 396 ++ + N ++ + N++ + + + ++ E ++ L A+ Sbjct: 347 TVVKVIRENILTEEHLKRLIEMVNQEMDVNSRGYQEELDAVLEEMNETNRRLERLYDAVE 406 Query: 397 VA-PEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAY 455 + +A +I L + + + + + + + ++ +++ + L Sbjct: 407 TGKIPLADLAPRIHDLKLRIEKLQERKIQITNNMSDRKVELASPEIVKSYVKDMRQVLQE 466 Query: 456 K--TFEKIIINTDNKTCDIYFMNGIVFKHYPLMKVI 489 T ++ + K ++ GI+ P+ V+ Sbjct: 467 SELTGKRAFLKGFIKKIEVKDRQGIIHYLLPINGVL 502 >UniRef50_C7WYU0 Site-specific recombinase n=2 Tax=Enterococcus faecalis RepID=C7WYU0_ENTFA Length = 537 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 101/520 (19%), Positives = 193/520 (37%), Gaps = 66/520 (12%) Query: 3 KAIAYMRFSSPGQMSGDS--LNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 +A Y R SS +S + QR L+AE+++ +D TY D G F G + Sbjct: 8 RAAIYCRLSSEDGADHESMSIGNQRALLAEYVQKQGWEIVD--TYIDDG---FSGTNFDR 62 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 F + IE G I ++ + L RL R + + I L D Sbjct: 63 PGFQRMIADIEKGRI---NLVITKDLSRLGRNYIMCGQYTEIYFPERHVRYIALNDGVDT 119 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPR-WLS 179 + + + K IL A + S+++K + K + G + A P +L Sbjct: 120 LNQTSSMDITPFKHILNDMYAKD----ISTKIKSTLHTKAKR----GEYLGALDPYGYLR 171 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFS------------- 226 D + + + + + +F++ +IA LN + + + Sbjct: 172 HPDDKHKLIINEETAPVVRRMFEMCAAGIGSKSIATTLNREGILSPTEYTRFRKHNPERD 231 Query: 227 ---GKESAWGPSVIEKLLANKALIGI------CVPSYRARGKGISE------IAGYYPRV 271 + S W + ++ +L N+ +G PSYR++ + + + + Sbjct: 232 GEFERRSFWTRTYVQFMLKNEIYVGSMVQGRQYTPSYRSKKREPIPKKDWIVVPNMHEPI 291 Query: 272 ISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVC 331 +S +LF Q+ A + P L + CEACG +M+ VS + YY C Sbjct: 292 VSRELFDEAQKRMGARKKTIKAKDEPD---LFAGLFFCEACGTSMVP-KVSQQKYFYYTC 347 Query: 332 PMRRLHR---CDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLELKIIELQMKI 388 C I RD ++ ++ N +++ + +K A + +ELK + Q + Sbjct: 348 GRSHAIGNLACSAHYINRDTFHQAVLEDIRRN-ARLFSEDTEKAAQKLMELKCADQQKQT 406 Query: 389 NNLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRE 448 + L+ A +++ LD +L+R + K + + D ++ RE Sbjct: 407 AAMKRDLASA------KKRLADLDVKLKRTYE--DNMSGKLPDHIFAMFIADYDTE--RE 456 Query: 449 LCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKHYPLMKV 488 + + EK + + DI ++ K+ K+ Sbjct: 457 TLKAKVAEL-EKALEKVRDAKADIDRFAALIQKYTSFEKL 495 >UniRef50_A5VBR4 Resolvase, N-terminal domain n=12 Tax=Alphaproteobacteria RepID=A5VBR4_SPHWW Length = 590 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 83/464 (17%), Positives = 174/464 (37%), Gaps = 58/464 (12%) Query: 3 KAIAYMRFSSPGQMSGD-SLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 +A Y+R S+ Q D S+ Q+R W + + TY + G SA + + Sbjct: 6 RAALYLRVSTARQAEHDVSIPDQKRQGEAWCAARGYHLAE--TYVEAGASAT---NDRRP 60 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F ++A P ++V S R R+ ++ + +G+ ++++ Sbjct: 61 EFQRMIEA-GTTKPAPFDVVVVHSFSRFFRDHFELEFY-VRKLAKNGVKLVSITQ----- 113 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL- 180 + ++P ++ ++A +S+ + V + K+ + +G + P + Sbjct: 114 -EMGDDPMHVMMRQIMALFDEYQSKENAKHVMRALKENARQGFWNGAL----PPIGYRII 168 Query: 181 ------DDKRTAFVPDPDRVKTIELIFKLRMER------RSLNAIAKYLNDHAVKNFSGK 228 + DP TI LIF+L +E + AI +LN + F+ Sbjct: 169 AAEQRGAKVKKKLEIDPLHADTIRLIFRLALEGDGSTGPMGVKAIVTHLNARRI--FTRD 226 Query: 229 ESAWGPSVIEKLLANKALIGICVPSYRARGKGISE----IAGYYPRVISDDLFYAVQEIR 284 WG + ++L + IG + R + K + + P +I + F VQ Sbjct: 227 GGRWGIGQLHRILTRRTYIGEHEFNKRTKAKELKPQSEVVVVPVPPLIDRETFDTVQARL 286 Query: 285 LAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLH---RCDR 341 A ++ LL + C CG M + G + YY C ++ C+ Sbjct: 287 KARNPKVTPARVVSGPTLLTGICYCARCGGAMTIRTGKGGRYRYYACSIKARQGETGCEG 346 Query: 342 PSIKRDLVDYNIINEL---LFNCSKIQPV------------ENKKDANETLELKIIELQM 386 +I D +D +I+ + + S+++ V E +++ L + E ++ Sbjct: 347 RAIPMDKLDTVVIDHIEREFLDPSRLETVLSAVLDRRQERGERRREHIADLNKRSAETEL 406 Query: 387 KINNLIVALSVAP---EVTAIAEKIRLLDKELRRASVSLKTLKS 427 ++ L A+ + A+ ++I L +A + ++ Sbjct: 407 RLKRLYDAIEAGVTDLDDPALKDRIEGLRALRDQAKADSERAQA 450 >UniRef50_Q489L6 Putative site-specific recombinase n=1 Tax=Colwellia psychrerythraea 34H RepID=Q489L6_COLP3 Length = 681 Score = 253 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 132/547 (24%), Positives = 219/547 (40%), Gaps = 85/547 (15%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKH-AQS 60 K AI+Y+RFS+ Q GDS NRQ + N+ + Y+DLG SA+K + A Sbjct: 4 KYAISYIRFSTAEQSLGDSYNRQFEEAERFCFENNIKIVKD--YKDLGKSAYKSVNLAPE 61 Query: 61 GAFSEFLDAIEHGYI--LPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNT 118 + FL+A++ G I T LLVESLDRLSR +V ++ IL GI ++TL D Sbjct: 62 SGLNYFLNALKRGEISNPKETHLLVESLDRLSRAQVTTSMHLFLGILKQGISILTLADGK 121 Query: 119 VYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGT---------- 168 VY + E ++ ++++ +A++ES KS R+ WK+K++ A Sbjct: 122 VY--EQGCELSDIVTSVMMLAKAHQESVDKSYRIGKVWKRKKEAARADAKNKAGTDKKVT 179 Query: 169 IMTASCPRWLSLDDKRTAFV--PDPDRVKTIELIFKLRME----------------RRSL 210 +T CP WL + + FV V T++LIF L + S Sbjct: 180 ALTKMCPFWLKIVKENDRFVYEIKEIEVNTVKLIFDLATGDAIDNEVELSISVENTKFSS 239 Query: 211 NAIAKYLNDHAVK----NFSGKESAWGPSVIEKLLANKALIGICVPSYRARGKGISE--- 263 IA+ LN+ + + W S I +++ NKA+ GI P + + Sbjct: 240 IEIARILNNENIPIIKSGKRKRTDYWHASNINRIITNKAVYGIYQPKLLVKKEYTHHDDF 299 Query: 264 -----------------IAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTV 306 I ++P +IS D F R F K NL + Sbjct: 300 NESYPVEKPYFENDGEAIEEFFPVIISKDKFDRATHQREEKFKGKRGKKGKRFSNLFNGL 359 Query: 307 MKCEACGNTMI----VHAVSGSLHGYYVCPMRR-LHRCDRPSIKRDLVDYNIIN------ 355 C C ++M+ + G Y C R C SI +++YN++ Sbjct: 360 ALCRKCQSSMVHSDKGTSKKGKRWVYLQCSNARIKGGCSATSINYSILEYNVLQFVQGTN 419 Query: 356 --ELLFNCS--KIQPVENKKDANETLELKIIELQMKINNLIV--ALSVAPEVTAIAEKIR 409 EL+ N + + +++ + +E + ++ + + + + I K+ Sbjct: 420 FSELISNIQLPSVGEISQQQNIIDIVEANLNKISKQFHKYMEFDDDNDPDFADEIKLKLI 479 Query: 410 LLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNK- 468 L KE R + K K N + +++L K ++I I+ +K Sbjct: 480 ELRKEKRTLNSKWSNEKVKLGNMLTRTSSVNLD--------EMSFKKLIKEIDISNQSKE 531 Query: 469 TCDIYFM 475 D+YF Sbjct: 532 NDDVYFK 538 >UniRef50_Q3Z3B5 Putative uncharacterized protein n=1 Tax=Shigella sonnei Ss046 RepID=Q3Z3B5_SHISS Length = 414 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 90/372 (24%), Positives = 178/372 (47%), Gaps = 17/372 (4%) Query: 131 LIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDKRTAFVPD 190 +IK I+IA+RA++ES +K R+ W K Q A E M P WL L + + ++ D Sbjct: 1 MIKHIIIAERAHQESLVKQKRIAQVWNHKTQLARELKKPMGKQAPGWLELSEDGSYYIVD 60 Query: 191 PDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGK----------ESAWGPSVIEKL 240 D+ + +I+ R+ S+ AI K+LN+ + + + W ++ + Sbjct: 61 EDKASLVNIIYDKRLSGMSMFAICKWLNEQGYLTINQRKVRISKTKKPDGNWSALSVKHI 120 Query: 241 LANKALIGICVPSYRARGKG---ISEIAGYYPRVISDDLFYAVQEIRLAP-FGISNSSKN 296 L +++++G + EI G+YP++++D FYAVQ++ G ++S ++ Sbjct: 121 LTSRSVLGYLPAKISTEDRKTVLREEIEGFYPQIVTDSKFYAVQQLLEETGKGKTSSGEH 180 Query: 297 PMLINLLRTVMKCEACGNTMIVHAVSGSLH-GYYVCPMRRLHRCDRPSIKRDLVDYNIIN 355 + +N+L+ +++C CG M + ++ G Y C + RC ++ R L+D + + Sbjct: 181 WLYVNILKGLIRC-KCGLVMTPTGIRKPVYQGTYRCNGNKESRCSYGTVSRKLLDTQLCS 239 Query: 356 ELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTAIAEKIRLLDKEL 415 L S++ + L+ ++ + ++ L L P +T I E +R+ +E Sbjct: 240 RLFSKLSQLHDEATDTAKLDELQRRLNTVDGELEKLTETLIQLPNITQIQEALRVKQEEK 299 Query: 416 RRASVSLKTLKSKGVN-SFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYF 474 V L K++ + S D +D+ S GR + + + ++I+++ + K DIY Sbjct: 300 DELIVQLSREKARVKSVSSLDLSGLDMESVEGRTEAQIIIKRLVKEIVVSGNEKLVDIYL 359 Query: 475 MNGIVFKHYPLM 486 NG + + +PL Sbjct: 360 HNGNMIRGFPLD 371 >UniRef50_Q5WE11 Site-specific recombinase for integration and excision n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WE11_BACSK Length = 467 Score = 251 bits (640), Expect = 7e-65, Method: Composition-based stats. Identities = 81/393 (20%), Positives = 155/393 (39%), Gaps = 29/393 (7%) Query: 3 KAIAYMRFSSPGQM-SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 + Y+R S+ Q+ G S++ QR + ++ + + Y D G+SA K+ + Sbjct: 2 RTAVYIRVSTEEQVNEGYSISAQRERLQAYITSQN--WDAVGFYVDEGVSA---KNTERP 56 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 L IE G+I +LV LDRL+R V + + L +G + + VY+ Sbjct: 57 QLKRMLKHIEEGFI---DVVLVYRLDRLTRS-VLDLYQLLDTFERNGCKFKSATE--VYD 110 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 + + L+A A E E RV++ ++ ++ G +S Sbjct: 111 TTTA---MGRLFITLVAALAQWERENLGERVRMGMTQRTREGQWHG----SSPAYGYKY- 162 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 + D ++ + I+ +E S +A LN+ + G AW S I ++L Sbjct: 163 -ENGIVSIDDEKANIVRWIYMSYIEGMSDRKLAVKLNEQGIPTQKG--GAWRESTIRRIL 219 Query: 242 ANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLIN 301 N+ G + R + + G P++I +F Q IR + + + Sbjct: 220 QNETYTGKLMWGVRVNKENAFSVDGAMPKIIEQGIFEKAQSIRKGRARV--HPRQATSKH 277 Query: 302 LLRTVMKCEACGNTMIVHAV--SGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINEL-- 357 + ++C CG M H G + Y C R H CD P I + +++ I Sbjct: 278 IFSGALRCARCGAAMKGHKKTDKGKEYRSYRCINRYNHTCDMPMISQKILEKTFITYFKD 337 Query: 358 LFNCSKIQPVENKKDANETLELKIIELQMKINN 390 + QP + +++ +E ++ +++ + Sbjct: 338 VEIVGSYQPPKENEESLLNVEKELEQIKKRRKK 370 >UniRef50_C1I4H9 DNA integration/recombination protein n=4 Tax=Clostridium RepID=C1I4H9_9CLOT Length = 526 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 97/506 (19%), Positives = 197/506 (38%), Gaps = 67/506 (13%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 +K+A AY+R+SS Q +SL Q R I E+ Y Y+D SA + Sbjct: 9 IKRACAYIRYSSDNQRD-ESLEAQIRAIKEFGYAKG--YEIVKVYQDKAKSATTD---RR 62 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 F + I+ ++V LDR SR+K A + + + +G+ ++++ +N Sbjct: 63 PGFQQM---IKDSANDIFDVVIVHKLDRFSRDKYDSAQYK-RKLKQNGVKLVSVTENLD- 117 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 + P S+I +I A S+ + V K+ A +G P + Sbjct: 118 -----DSPESVILESVIEGMAEYYSKNLAREVMKGMKETAYQAKHTG----GLPPLGYDV 168 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 + ++ +V + +++ LIF++ R +L+ + LN K +G + + + I + Sbjct: 169 NAEKK-YVINEREAESVRLIFEMYTARYTLSQMVDELNSRGFKTKAG--AIFKHNSINSV 225 Query: 241 LANKALIGICVPSYRARGK--------------GISEIAGYYPRVISDDLFYAVQEIRLA 286 L N+ G+ + + A+ I I G P++I +L+ QEI + Sbjct: 226 LTNEKYTGVYIFNKSAKKDAYGRRNSHLQKDQSEIIRIEGGMPQIIDKELYEKAQEILRS 285 Query: 287 PFGISNSSKNPMLINLLRTVMKCEACGNTMIVHA---VSGSLHGYYVCPMRRL---HRCD 340 +K LL ++KC CG M + S L+ Y C R+ + C Sbjct: 286 RKKSKAVNK-AKESYLLSGIIKCGECGYAMYGNRRQARSKPLYVSYRCGCRKRTSSNVCS 344 Query: 341 RPSIKRDLVDYNIINELL---------------FNCSKIQPVENKKDANETLELKIIELQ 385 I+++ ++ ++ EL N + E +D +E ++ +++ Sbjct: 345 NKEIRKEYIEEYVLAELEERIFNDKSIPLLVEGINEELKKQSEGDEDKRGIIEKELKDIE 404 Query: 386 MKINNLIVALSVAPEVTAIAEKIRLLDKELRRAS---VSLKTLKSKGVNSFSDFYAIDLT 442 +I N+++A++ K+ L + V ++ +S + D + Sbjct: 405 KQIGNIVMAITNGFIQEEFKVKMEELKERKAYLEGKLVDIEASQSVTKVTEEDIRGLLAG 464 Query: 443 SKNGRE-----LCRTLAYKTFEKIII 463 K C+ +++++ Sbjct: 465 FKEYVVSKNIPECKNFIQDFVKEVVV 490 >UniRef50_A6LK15 Resolvase, N-terminal domain n=1 Tax=Thermosipho melanesiensis BI429 RepID=A6LK15_THEM4 Length = 494 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 112/502 (22%), Positives = 203/502 (40%), Gaps = 68/502 (13%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 KA AY R+SS Q S+ Q I E+ K N+ + TY D SA K A Sbjct: 10 KAAAYARYSSNNQSE-LSIEAQLSEIKEYAKNNN--IVIVETYVDKAKSA---KSADRPE 63 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F + + +LV LDR SR + +++ L+ N + +I++ + Sbjct: 64 FQRMISDAKK---HKFDVILVHKLDRFSRNRY-DSLTYSHLLENSNVKLISITEQF---- 115 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 S + L+K+I+ + +E + ++ K K + A G + P L + Sbjct: 116 -SDDPAGELVKSIIESV-----NEWYINNLRNEVKTKTKYAAMKGYFLGGMPPLGYDLKE 169 Query: 183 -------KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPS 235 R + + ++ IF+L E S IA+ LN K +G + S Sbjct: 170 VIDEYGKTRKRYAVNHAEAIIVKEIFRLYAEGLSFKKIAESLNQKGYKTKNG--GKFKAS 227 Query: 236 VIEKLLANKALIGICVPSYRARGKGIS-------EIAGYYPRVISDDLFYAVQEIRLAPF 288 I ++L NK GI + + G I ++ G P +I DLF VQE Sbjct: 228 SISEILRNKKYGGIYIYNQSKHGTRIRSEHDDVIKVEGAVPTIIDRDLFDKVQEKLSKRR 287 Query: 289 GISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDR-PSIKRD 347 + LL + C ACG+ + SG + Y+C + + + SI + Sbjct: 288 R----NIQKKHHYLLLNIAYCGACGSRLTG---SGGKYPKYICQDWKNKKSTKLVSIGKT 340 Query: 348 LVDYNII---NELLFNCSKIQPVENKKDANET--------------LELKIIELQMKINN 390 ++ +I LL + KI + K+ N+T L++K +L+ KINN Sbjct: 341 KLEKQVISYIKNLLLSIDKIDFSKLTKELNKTEAKREQLYEKQFKELQMKKSDLENKINN 400 Query: 391 LIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSD-------FYAIDLTS 443 L+ A+ + + ++ + L+ EL + + +K L +K +N +++ ++ + Sbjct: 401 LVRAIEKGILIEKLEKEAKDLEIELNKVNQEIKNLHNKTINKYTEEQVREIYIEFMEQLN 460 Query: 444 KNGRELCRTLAYKTFEKIIINT 465 + + + + EK+I+ Sbjct: 461 SDNLLVIEKVIKRLIEKVIVYP 482 >UniRef50_A6LN32 Resolvase, N-terminal domain n=1 Tax=Thermosipho melanesiensis BI429 RepID=A6LN32_THEM4 Length = 485 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 95/508 (18%), Positives = 178/508 (35%), Gaps = 60/508 (11%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 MK+A AY R+SS Q S+ Q I ++ + Y+ Y D SA K Sbjct: 1 MKRAAAYARYSSDRQSD-TSIEAQLEKIRKYCEEKG--YVVVKEYIDRAQSAATDK---R 54 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 AF + E+ ++V LDR +R + K + I + + + Sbjct: 55 IAFQQMFKDAEN---HEFDVVVVYKLDRFARNLYDSVVYT-KKLEELNIALESTTEPITQ 110 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS- 179 +I + I+ A +E+ +K + K + G M P Sbjct: 111 DI-----AGKFFRNIMGAI-----NELYIENLKQEIRDKAIVVAKKGYFMGGVPPFGFKL 160 Query: 180 ------LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWG 233 KR + D + + IF+L + +L IA LN +K G + W Sbjct: 161 VEETDEYGKKRKRYEIDENEAPYVREIFQLASQGVTLRQIADKLNQKGLKTRRG--NKWT 218 Query: 234 PSVIEKLLANKALIGICV------PSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAP 287 + +++ N+ GI +Y A + + I G P ++ ++ ++ + Sbjct: 219 VRALYEMILNEKYAGIYTYQKGTKHNYHANREDVIRIPGVIPAIVDEETYWNARNKLGI- 277 Query: 288 FGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRD 347 S + LL ++ C CGN M A SG Y +R SI + Sbjct: 278 ----GSKRVKRHHYLLNGILYCAVCGNPMNGGAQSGDYPRYMCSYAKRFKEKGHVSIGKK 333 Query: 348 LVDYNIINEL---------LFNCSKIQPVE------NKKDANETLELKIIELQMKINNLI 392 ++ ++ + +K E K+ + L+ ++ E+ +K+ Sbjct: 334 KIEDYVLTHIKHTFFTNVDFEKLAKQLNKELNKTNKTKEKQIQKLKAELAEINLKLQRAT 393 Query: 393 VALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDL----TSKNGRE 448 A+ E+ + ++I L ++ L+ + ++ S + L K Sbjct: 394 QAILAGVELDTLKDEIEKLKQQKIEKEFKLEKVVNEETPSLITPEGLQLLWNELQKLLET 453 Query: 449 LCRTLAYKTFEKIIINTDNKTCDIYFMN 476 + K E+I + D DI + N Sbjct: 454 EKELVIKKLIERITVYPDG-FIDIKYRN 480 >UniRef50_D1AQX9 Recombinase n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AQX9_SEBTE Length = 496 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 103/509 (20%), Positives = 186/509 (36%), Gaps = 61/509 (11%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 MKKA+ Y RFSS Q S S++ Q R I ++ N+ L T TY D +S Sbjct: 1 MKKAVIYARFSSDNQRS-VSIDAQIRAIRDYCSKNN--ILVTDTYIDEAISGTSANSR-- 55 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 FL IE ++V LDR +R +A K + ++ + +I++ + Sbjct: 56 ---VHFLKMIEDSSKNNFDYVVVHKLDRFARNSYDQAYYE-KKLNDNRVKIISVLEQF-- 109 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 + P +I +I S S K + + + P L + Sbjct: 110 ----NDSPEHVILKGVITSMNEYYSLNLSRETKKGLYEN----FYNCQHASGMPPLGLDV 161 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 D + +V + + K + LIF+L +E I+ +LN N + +G I + Sbjct: 162 DKETRKYVINEEEAKIVRLIFRLSLEGNGYAFISNFLNKKGYLNKRKRP--FGKGGIRDM 219 Query: 241 LANKALIGICVPSYRARG---KGISEI-AGYYPRVISDDLFYAVQEIRLAPFGISNSSKN 296 L N+ IG + + + G +I G P +I + FYAVQ+I I++ N Sbjct: 220 LLNEKYIGNYILGKKNKKGQLTGREKIQEGVIPAIIDKETFYAVQDIFKN--RIASKKSN 277 Query: 297 PMLINLLRTVMKCEACGNTMIVHAV---SGSLHGYYVCPMRRLHR--CDRPSIKRDLVDY 351 + LL KC CG + + Y C R+ + C P I+++++++ Sbjct: 278 AKVDYLLTGFCKCGECGGSYSGAGKIKGRSKQYDSYGCTSRKSKKTDCINPKIRKEVLEH 337 Query: 352 NIINELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPE----------- 400 + + +I + + L KI + I+ L A + Sbjct: 338 IVFKAI---KDEIFSPDRLNIFIQELTKKIDDQNKNIDVLTKKNDQAIQNIKNKKEKLLS 394 Query: 401 --------VTAIAEKIRLLDKELRRASVSLKTLKS------KGVNSFSDFYAIDLTSKNG 446 K L+ +L + L + ++ L +KN Sbjct: 395 LFLDSHLNEDEFKPKNDELELQLIEKIRERENLNRGNGIDVNKIKAYVRKLVEGLENKNV 454 Query: 447 RELCRTLAYKTFEKIIINTDNKTCDIYFM 475 + + + E+I++ + T + F Sbjct: 455 S-IKKQILQTFVEEILVFKGHITIRLKFF 482 >UniRef50_C9LP68 DNA integration/recombination protein n=1 Tax=Dialister invisus DSM 15470 RepID=C9LP68_9FIRM Length = 503 Score = 247 bits (630), Expect = 8e-64, Method: Composition-based stats. Identities = 97/513 (18%), Positives = 187/513 (36%), Gaps = 63/513 (12%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 M +A Y RFSS Q +S+ Q R E+ K ++ Y Y D S + Sbjct: 1 MLRAALYARFSSENQRE-ESILAQFRDSTEYCKKHN--YAIVAKYADEAKSGTTTIGREQ 57 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 L + G ++ +DR +R ++ I + K + G+ + Sbjct: 58 YKL--MLKDAQKGKF---DIVVFHKIDRNARNELDYYITKHK-LEEAGVKYAY----SRQ 107 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 +IDS + +++++L+ A S S+ +K ++ G P S+ Sbjct: 108 DIDSTSPEGQMMESMLVGMAA-YYSRNLSNEIKKGLRENAIQ----GKCTGGRPPYGFSV 162 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 D + + + D + +IF L I K L + +N +GKE + + I ++ Sbjct: 163 DADKK-LIINEDEAPAVRMIFDLYAAGVHYGVIRKRLFNAGYRNRAGKE--FTIASIYEI 219 Query: 241 LANKALIGICVPSYRARGKGISE----------IAGYYPRVISDDLFYAVQEIRLAPFGI 290 L N+ +G KG P +S ++F VQ ++L Sbjct: 220 LRNRKYVGDLYLGKTLFRKGKRNNHQTSDNVQYFENVIPATVSREIFEEVQ-VKLDQNKR 278 Query: 291 SNSSKNPMLINLLRTVMKCEACGNTMIVHAVS---GSLHGYYVCPMRR---LHRCDRPSI 344 + + N I L ++ C CG+ M+ H+ G + YY CP R +C + I Sbjct: 279 RSGAGNAKAIYALSGLIHCGQCGSAMVAHSTKNSRGIKNYYYRCPKGRLLGEEKCPQKFI 338 Query: 345 KRDLVDYNI----------------INELLFNCSKIQPVENKKDANETLELKIIELQMKI 388 RD ++ + I ++ + V + + + L+ + + ++ Sbjct: 339 NRDDIESTVYQLIRKLFTAPDAHDQIKRIIAKNNMTVKVPDYTELIKRLKKQESDASKRL 398 Query: 389 NNLIVA--LSVAPEVTA-----IAEKIRLLDKELRRASVSLKTLKSKG--VNSFSDFYAI 439 + L E T+ + E+I L +++ A ++S ++ D + Sbjct: 399 DKLYDLYMTDRGDEFTSAKMAQLKEEILRLRAQIKEAEDRQAIVQSTTFDIDKIIDTFQK 458 Query: 440 DLTSKNGRELCRTLAYKTFEKIIINTDNKTCDI 472 L K E +TL + I + D + Sbjct: 459 QLKQKQSPEFIKTLFELAVKNITVYPDKIKVAL 491 >UniRef50_C5RQ70 Resolvase domain protein n=4 Tax=Firmicutes RepID=C5RQ70_CLOCL Length = 529 Score = 247 bits (630), Expect = 8e-64, Method: Composition-based stats. Identities = 104/518 (20%), Positives = 192/518 (37%), Gaps = 63/518 (12%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 MKK AY R S+ S Q A ++K N+++ + Y D G+SA K + Sbjct: 27 MKKVAAYARVSTDNDEQLSSFEAQMDYYARYIKSNTEWSFVEV-YTDEGISATSTK--KR 83 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 F+ + +G I ++ +S+ R +R V + + ++ + G++V +N +Y Sbjct: 84 DGFNRMITDALNGKI---DLIITKSVSRFARNTV-DTLTTVRQLKEKGVEVYFEKEN-IY 138 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 +DS E + +++ A EES S V +K+ D S ++L Sbjct: 139 TLDSKGE----LLITIMSSLAQEESRSISENVTWGQRKRFADGKVSLPYK-----QFLGY 189 Query: 181 DDKRTAF-VPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEK 239 + I I+KL +E ++ +AIAK+L + GKE W S + Sbjct: 190 EKGEDGLPKIVEKEATIIRTIYKLFLEGKTPSAIAKHLTLSKIPTPGGKE-IWQASTVSS 248 Query: 240 LLANKALIGI------CVPSYRARGKGISE-------IAGYYPRVISDDLFYAVQEIRLA 286 +L N+ G + + K I+E + +P +I+ ++F VQ Sbjct: 249 ILKNEKYKGDAILQKSFTIDFLTKKKKINEGEIPQYYVENSHPAIITPEVFDLVQHEIKK 308 Query: 287 PFGISNSSKNPMLINLLRTVMKCEACGNTM---IVHAVSGSLHGYYVCPM--RRLHRCDR 341 + C CGN + H+ S + C + +C Sbjct: 309 RKDAKG---YKTSSGCFSGKIVCGKCGNFYGSKVWHSTSKYRRIIWQCNSKFKNNEKCGT 365 Query: 342 PSIKRDLVDY---NIINELLFNCSKIQP----VENKKDANETLELKIIELQMKINNLIVA 394 P + D + + N ++ N +I + L+ + +LQ ++ + Sbjct: 366 PHLYEDKIKQAFVEVFNSVIENKEEILAGYEGILQALTDTTKLDKESFKLQSELEVVSEM 425 Query: 395 LSVAPE--------VTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAI-----DL 441 L E E+ + L + L+ + K + + +I +L Sbjct: 426 LKKCVEENAHSALNQDEYEERYKALAERYENIKKGLEEIDEKRLERSAKHESITAFIKEL 485 Query: 442 TSKNG--RELCRTLAYKTFEKIIINTDNKTCDIYFMNG 477 + G E L T EKII+NT+ + F +G Sbjct: 486 EQREGLITEFDENLWAGTIEKIIVNTEEQ-ITFVFKDG 522 >UniRef50_C5TBX4 Resolvase domain protein (Fragment) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TBX4_ACIDE Length = 308 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 90/288 (31%), Positives = 148/288 (51%), Gaps = 24/288 (8%) Query: 4 AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAF 63 A +Y+RFS+ Q GDSL RQ + + + L ++Y DLG+SAFK K+ + GA Sbjct: 22 AYSYVRFSTARQELGDSLRRQVEMAETYCTKHGLD-LHPVSYRDLGVSAFKRKNLEKGAL 80 Query: 64 SEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNID 123 + F+DA++ G + G+ L++E DRLSR V A+ L +++ GI ++TL D +++ + Sbjct: 81 AAFIDAVKTGKVPMGSYLVIEQFDRLSRADVDVALRLLLDLVHSGITLVTLVDEKIWDRE 140 Query: 124 SLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESG-TIMTASCPRWLSLDD 182 ++ + +LI AI+ RAN ES K++R+ L W +K+ +A G I+T+ CPRWL Sbjct: 141 AIKDVGNLILAIVFMSRANNESTSKATRIGLKWDQKKLNAKTPGARIVTSECPRWLRPTA 200 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHA------------------VKN 224 +T F +R +++ +F +R+ + I ND K Sbjct: 201 DKTGFEIIEERAESVRKVFAMRIGGHGIVGIVSRANDEGWPVPGKKAVRKSGEDKETFKL 260 Query: 225 FSGKESAWGPSVIEKLLANKALIGICVPSYRA----RGKGISEIAGYY 268 S E W S + ++L N+A++G +P R I GYY Sbjct: 261 RSSTEMTWHTSTVGRMLKNRAVLGEYLPHKNGEDGNRIPAAEPILGYY 308 >UniRef50_B7JIH4 Resolvase domain protein n=4 Tax=Bacillus cereus group RepID=B7JIH4_BACC0 Length = 515 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 99/534 (18%), Positives = 188/534 (35%), Gaps = 70/534 (13%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 KA Y+R S+ Q G SL Q ++ E+ D Y D G + GK+ Sbjct: 6 KAGIYIRVSTEEQKQGHSLEAQESMLKEFADRKGYEIYDV--YNDGG---YSGKNFNRPE 60 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 L ++ I +LV +DRLSR + ++I ++ Sbjct: 61 IQRLLRDLKDDKI---DVILVWKVDRLSRNNTDVMSLIDTELTPRKKNLIITS----IDM 113 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 DS + + ++L + A E RVK +K+ + +G + L D Sbjct: 114 DSSSPTGHMFISLL-STFARYERATIIDRVKAGMQKRAEKGYWNGGSI-------LGYDS 165 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 + + + + + IF+LR E + I LN+ +K +GK + I+ ++ Sbjct: 166 VDKKLIINENESEIVREIFQLRAEGKGYKFIVNILNEKGIKTKTGKN--FSIPAIKVIVN 223 Query: 243 NKALIGICVPSYRARGKGISE--------IAGYYPRVISDDLFYAVQEIRLAPFGISNSS 294 N G V + G + +I + L+ VQ++ +S+ Sbjct: 224 NHIYNGKMVWKKHQDWNTRRRTGKSEPIIVEGIHDAIIDEGLWTRVQKVNELQKNSFSSN 283 Query: 295 KNPMLINLLRTVMKCEACGNTMIVHAVSGS----LHGYYVCPMRRLHR---CDRPSIKRD 347 +N LL ++KC CG ++ H YY+C C I++D Sbjct: 284 RNFNGNFLLTGILKCPKCGAGTVMSKTKKRNSDDYHLYYMCQAYHNKGSSVCSANLIRKD 343 Query: 348 LVDYNIIN--ELLFNCSKI---QPVENKKDANETLELKIIELQ-------------MKIN 389 V+ ++N LL N + I E D N+T E I ++ K++ Sbjct: 344 QVEQQVLNIISLLVNENDIINALIDELNSDNNKTNESHIAHIKMLKKQLGKAYDKRKKLD 403 Query: 390 NLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAID--------- 440 N E + + L ++ + +++ +S+ + + S + Sbjct: 404 N--DYFEGNIEGSTYNRLMNELQLDINKLKRNVRESESEIIKNDSTINKEEVIYALENFN 461 Query: 441 -LTSKNGRELCRTLAYKTFEKIIINTDNKTC---DIYFMNGIVFKHYPLMKVIS 490 L E + L ++ + + K +F+ V + + +S Sbjct: 462 KLFKIVNDEEKKLLIRSLIREVQMEANRKDVKEITFWFLPSSVLPSNKVRRTVS 515 >UniRef50_Q883N3 Conserved domain protein n=1 Tax=Pseudomonas syringae pv. tomato RepID=Q883N3_PSESM Length = 534 Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 117/483 (24%), Positives = 200/483 (41%), Gaps = 46/483 (9%) Query: 1 MKK-AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTIT-YEDLGLSAFKGKHA 58 M+K A +Y+RFSS Q GDSL RQ ++A WL N +Y L T Y+DLG S F G H Sbjct: 1 MQKLAFSYVRFSSLKQRHGDSLKRQTDMVANWLLANPEYKLSGETSYQDLGKSGFSGAHL 60 Query: 59 QSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNT 118 + AF L AIE+G I G+ +L+E +DR R + E + L I+N G+D++TL D Sbjct: 61 DN-AFGRLLAAIENGAIPKGSAILIEQIDRAGRMEPMEMLPLLSRIVNAGVDLVTLDDGI 119 Query: 119 VYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWL 178 Y+ S+N + L + Q+A++ S+ S R++ +++ KR A +G T P W+ Sbjct: 120 TYDRASVNSNH-LFLLVAKVQQAHQYSDSLSRRLRAAYQTKRAKA-AAGEGATRRMPLWI 177 Query: 179 SLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIE 238 R + +F+ I L K PS Sbjct: 178 RDGKLRDDI------APFVTQVFEDYAAGIGERRILGRL-----KGQHPDFETISPSTFR 226 Query: 239 KLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPM 298 + L N +G ++I +P V+S +L++ VQ+ +S Sbjct: 227 RWLRNPVAVG-----------RWNDIEDVWPAVVSKELWFRVQKRLTDGVKPKAASSK-- 273 Query: 299 LINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRL-----HRCDRP-SIKR---DLV 349 LL ++KC CG V G+L +C R C SI D + Sbjct: 274 --YLLSGLVKCARCGKNYCVGGQKGALT--MLCVSRHRFGSGAGGCTNKRSIPYAVFDFI 329 Query: 350 DYNIINELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTAIAEKIR 409 + L S+ Q + + ++ ++IEL+ + ++ L V I + + Sbjct: 330 RSQTAHAALVRASQSQNLTASEKRQIEIDGELIELRKQSSHAAEGLVRYGMVKEITDVLD 389 Query: 410 LLDKELRRASVSLKTLKSKGVNS-FSDFYAIDLTSKNGRELC-RTLAYKTFEKIIINTDN 467 + ++ R L++ + D ++ + + L ++++ D+ Sbjct: 390 RVTDQIDRLEKERVMLQAVPAPATLDDMIDVENDLLDDDIVKLNALLQGVGYEMVV--DD 447 Query: 468 KTC 470 +T Sbjct: 448 RTI 450 >UniRef50_Q5XBF4 Site-specific recombinase n=9 Tax=Bacteria RepID=Q5XBF4_STRP6 Length = 521 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 105/525 (20%), Positives = 205/525 (39%), Gaps = 81/525 (15%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 ++ Y R S+ + S Q R AE++ SD+ + Y D G+S K Sbjct: 26 RRVAGYARVSTDHEDQTTSYESQMRYYAEYISTRSDWEFVKM-YSDEGISGTNTKL--RV 82 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F ++ G I ++ +S+ R +R V +++ ++ + G+++ +N Sbjct: 83 GFKSMIEDALAGKI---DLIITKSVSRFARNTV-DSLTTVRKLKEVGVEIYFEKEN---- 134 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 I +L+ L+ I+ + A EES S V +K+ G + Sbjct: 135 IWTLDSKGELLITIM-SSLAQEESRSISENVTWGLRKQ----FAEGKVHFPYTNVMGFEK 189 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 + V + + KT+ IF+ + ++ +IAK L + + SGK + W I+++L Sbjct: 190 GENGEIVVNQEEAKTVRYIFQQALLGKTPYSIAKDLTQQGILSPSGK-NHWSSVTIKRML 248 Query: 242 ANKALIG------ICVPSYRARGKGISE-------IAGYYPRVISDDLFYAVQEIRLAPF 288 N+ G + ++ K I++ + + ++ + F AVQ Sbjct: 249 RNEKYKGDALLQKTYTIDFLSKKKNINKGELPQYYVENNHEAIVDKETFDAVQ------A 302 Query: 289 GISNSSKNPMLINLLRTVMKCEACGNTM---IVHAVSGSLHGYYVCPMRRL--HRCDRPS 343 + K L + + C CG+ + H+ S Y C + +C P Sbjct: 303 SLDRKEKGKGSTTLFSSKLVCGDCGHYFGSKVWHSTSKYRRVIYQCNEKYKGEKKCTTPH 362 Query: 344 IKRDLVDYNI---INELLFNCSK-IQPVENKKDANETLELKIIELQMK---------INN 390 + D + IN+++ N + IQ +E D E+ +L+ ++++ ++N Sbjct: 363 VTEDEIKDWFVTAINKVISNKDEIIQNLEMLLDVGESSDLERRLVELETEVEVVTQMVSN 422 Query: 391 LIVALSVAPE---------------VTAIAEKIRLLDKELRRASVSLKTLKS--KGVNSF 433 L+ ++ P+ A+ +I ++K+L A+ K LK K +N Sbjct: 423 LVKENAIMPQDQDTYQKKYSNLVERHDALVSEIESIEKQLLEAASHQKDLKEFLKTLNQQ 482 Query: 434 SDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGI 478 S+ + E L ++I I D +T I F NGI Sbjct: 483 SELIS---------EFDELLWETMVDEIKIFCD-QTVAIKFKNGI 517 >UniRef50_A6NTU2 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NTU2_9BACE Length = 509 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 93/522 (17%), Positives = 188/522 (36%), Gaps = 70/522 (13%) Query: 5 IAYMRFSSPG--QMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 Y+R S + DS+ QR+L+ +++ V+ + L Y+D G + G + A Sbjct: 7 AGYLRLSREDGDKAESDSIANQRKLLEQYITVHPELRLADF-YQDDG---YTGTNFDRPA 62 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F + I+ G + +LV+ L R R+ + + G+ I + D+ Sbjct: 63 FRRMEEDIKQGRV---NCVLVKDLSRFGRDYIEVGRYLEREFPARGVRFIAINDHVDSAR 119 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD- 181 + +K I Q A + S +V+ + K E G + A D Sbjct: 120 GRYDMLLP-MKNIFNTQYARD----ISDKVRSAIHTK----QERGEFVGAFASYGYRKDP 170 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFS--------------- 226 + + DP + + IF L E IAK LN + + S Sbjct: 171 ENHNHLLIDPPAAQVVRRIFNLFEEGCGKVRIAKTLNQERIPSPSEYKRILGERYHNGRR 230 Query: 227 -GKESAWGPSVIEKLLANKALIGICVPSYRAR-----------GKGISEIAGYYPRVISD 274 K + W + I ++L N+ G R + + + + +IS Sbjct: 231 MDKTTYWTYATIHRILQNQMYAGNMEQGRNLRATMHGRAKQKAREDWTVVPDTHEAIISP 290 Query: 275 DLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMR 334 + + VQ + + ++N + ++C CG M+ +G + YY C Sbjct: 291 EQWERVQALLGRRTRELSFAQN---QSPFAGFLRCGDCGRAMVKTRSAGGI--YYSCGSY 345 Query: 335 RLHR---CDRPSIKRDLVDYNI---INELLFNCSKIQPVENKKDANETL-----ELKIIE 383 + + C + SI + L++ + +N +L ++ + ++ DA L ++ E Sbjct: 346 KRYGPTVCSKHSISQSLLEEVVLEDLNRVLAAVEDLEKLADETDAQTMLSPKHERGRLEE 405 Query: 384 LQMKINNLIVAL-----SVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYA 438 ++ L A +++ R + L+ L G +S + Sbjct: 406 GVERLYRLKKAAYEDFREGLISRKDFLRYREDYERQERELNAQLEQLSGGGEDSGRHPW- 464 Query: 439 IDLTSKNGR--ELCRTLAYKTFEKIIINTDNKTCDIYFMNGI 478 ++ + GR L R ++ ++I++ D + Y + Sbjct: 465 VEALLRQGRLTALDRVTVAESVKQILVFEDGRIDITYTFSDT 506 >UniRef50_A7HP92 Resolvase domain n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HP92_PARL1 Length = 537 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 88/459 (19%), Positives = 158/459 (34%), Gaps = 56/459 (12%) Query: 2 KKAIAYMRFSSPGQMSGD-SLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 +KAI Y R S+ Q D S+ Q + K + TY D G SA Sbjct: 3 QKAIVYARVSTTRQADHDLSIPDQIAHAERYCKERDIEIV--GTYVDPGASARDD---NR 57 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 F +D ++ G + +LV S R R+ G A+ +++ HG ++++ T Sbjct: 58 PQFQRMMDDVKSGA-MQVDVVLVHSFSRFFRDACGAAVYT-RILEKHGARLVSMTQETGE 115 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 + + +++ +S + V S + + +G A+ P Sbjct: 116 GAQAN------LMRHMLSSFDEYQSAETAKHVTRSMIENAKRGFWNG----AAAPYGYKT 165 Query: 181 -------DDKRTAFVPDPDRVKTIELIFKLRMER------RSLNAIAKYLNDHAVKNFSG 227 + + +P + ++LIF+L + + + YLN V N +G Sbjct: 166 IVVERHGNKDKKKLDLEPQEAEIVKLIFQLYLYGDGKTGPLGIKNLVSYLNGRGVNNRNG 225 Query: 228 KESAWGPSVIEKLLANKALIGICVPSY---RARGKGISE--IAGYYPRVISDDLFYAVQE 282 K + I++ L A IG + R R E I P ++ + +F+AVQ Sbjct: 226 KP--FRIQHIQEALRRSAYIGTHYFNRTDSRTRKPRPREEWIEIAVPPIVEESIFHAVQA 283 Query: 283 IRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRR---LHRC 339 A + LL V CE CG M + YY C C Sbjct: 284 QLDARNPTMTPPRIASSRILLTGVATCENCGAPMRTRTGKNGQYWYYTCSRSADMGKSGC 343 Query: 340 DRPSIKRDLVDYNIINELLFNCSKIQPVENK---------------KDANETLELKIIEL 384 ++ +D + + L + +EN + + L+ + EL Sbjct: 344 AGVTVPMGKLDEIVTDALCDKVLQADRLENMLGSLLARNSGRRAAAQAKLKELKRERREL 403 Query: 385 QMKINNLIVALSVAPEVTAIAEKIRLLDKELRRASVSLK 423 K+ L AL + A+ + E + + + Sbjct: 404 DQKLAKLTDALEKGVPLDAVKSRFTQRQNEREQVNRVIS 442 >UniRef50_Q65CS9 Site-specific DNA recombinase n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65CS9_BACLD Length = 414 Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats. Identities = 90/422 (21%), Positives = 167/422 (39%), Gaps = 48/422 (11%) Query: 1 MKKAIAYMRFSSPGQM-SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 +K+ Y R S+ Q G S++ Q + + ++ ++ + Y D G+S GK+ Sbjct: 4 IKRVAIYCRVSTEEQATEGYSISAQLQTLRQYTQLYG--WEIAEEYVDEGIS---GKNIS 58 Query: 60 -SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNT 118 A + + +E +LV + RLSR + + + L ++G+ I+ +N Sbjct: 59 GRPAMQKLISDVEKDKFQA---VLVWKISRLSRN-MLDTLTLLDKFEDYGVKFISYSENF 114 Query: 119 VYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWL 178 P + L+A A E S VKL K++ + +G ++ Sbjct: 115 D-----TGSPIGRLVVQLMASIAEMERNTLSENVKLGMKQRALEGSWNGGVVFG------ 163 Query: 179 SLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIE 238 D V + + ++ I++L + L +IA YLN + + + + + Sbjct: 164 -YDTIEKELVINKKEAEIVQQIYQLYANGKGLKSIANYLNKAGYRTK--RNCYFSINGVA 220 Query: 239 KLLANKALIGICVP-------SYRARGKGISEI--AGYYPRVISDDLFYAVQEIRLAPFG 289 ++L N G + R RGK + I G + +ISD+L+ VQ R + Sbjct: 221 QILDNVIYNGKISWLKVENWDTKRRRGKNPNPILVEGQHEAIISDELWSMVQARRKSKSF 280 Query: 290 ISNSSKNPMLINLLRTVMKCEACGNTMI-------VHAVSGSLHGYYVCPMRRLHR---C 339 S P LL ++++C CG M+ + + YYVC C Sbjct: 281 KQRQSNEP---FLLSSLLRCPDCGQGMVPAITTNKRKDGTKKKYRYYVCSNFHNKGSSAC 337 Query: 340 DRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLELK-IIELQMKINNLIVALSVA 398 SIK +Y +IN++ S + +K + T ++ + +L ++ L LS Sbjct: 338 RANSIKAYDAEYEVINKIEKILSNQNQLFSKLQSINTTSIESLNQLNSELKQLENRLSEI 397 Query: 399 PE 400 E Sbjct: 398 QE 399 >UniRef50_C4F8C7 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F8C7_9ACTN Length = 472 Score = 244 bits (622), Expect = 7e-63, Method: Composition-based stats. Identities = 104/485 (21%), Positives = 190/485 (39%), Gaps = 62/485 (12%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 K+A+ Y RFS Q S++ Q R+ EW Y Y D +S Sbjct: 5 KRAVIYARFSCSKQREA-SIDDQLRVCREWCDREG--YEVVREYSDYAMSGRSD---DRP 58 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F E + +LV +DR SR + I + K + HG++V++ + Sbjct: 59 QFQEMIANAGES-----DIVLVYMMDRFSRSEYDAPIYK-KELAKHGVEVVSAMEALP-- 110 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 + P ++ + A ES S RVK L +G + Sbjct: 111 ----DGPEKILIEKIYEGLAAVESAKTSIRVKRGMGGNALKCLTNGVRIYGY------RT 160 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 + F DPD + ++ +K+R+ ++N I L + VKN +G A ++ K+L Sbjct: 161 AEDGRFEIDPDAAENVKWAYKMRLRGIAVNQIGTMLAERGVKNSTG--GACNYNLARKIL 218 Query: 242 ANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLIN 301 +++ G+ + I G P++I F QE+R S + Sbjct: 219 SDERYTGVYIWDD-------VRIEGGMPQIIDRGTFMEAQEVRSRKCRADESWGD----Y 267 Query: 302 LLRTVMKCEACGNTM---IVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINELL 358 L+ C CG ++ + G + YY CP +C + +I+RDL++ I++ L Sbjct: 268 ALKGKALCGECGRSLQGISGYGNKGVRYEYYSCP----GKC-QKNIRRDLLEGEIVHALR 322 Query: 359 FNCSK----------IQPVENKKDAN---ETLELKIIELQMKINNLIVALSVAPEVTAIA 405 S + +++ K N E + + + + + NL+ A+ V Sbjct: 323 SMLSDRSTAMMIARALCGLQSHKALNIEKERAQKSLSDAEKSLKNLLSAVEQGIIVPGTK 382 Query: 406 EKIRLLDKELRRASVSLKTLKSKGV--NSFSDF--YAIDLTSKNGRELCRTLAYKTFEKI 461 E+I+ L+ + RA L++ +S+ V F+DF Y +L +N + E + Sbjct: 383 ERIQELEAQKMRALRDLESAQSEEVDPEGFADFLMYGEELDDRNLLKAFVYQVMLMPESV 442 Query: 462 IINTD 466 ++ + Sbjct: 443 VVTLN 447 >UniRef50_C4ZFI3 Site-specific recombinase n=3 Tax=Clostridiales RepID=C4ZFI3_EUBR3 Length = 563 Score = 244 bits (622), Expect = 7e-63, Method: Composition-based stats. Identities = 103/533 (19%), Positives = 194/533 (36%), Gaps = 78/533 (14%) Query: 4 AIAYMRFS-------SPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGK 56 A Y+R S S ++ +S++ Q+ LI ++LK D + ++ +D + G Sbjct: 11 AAIYVRLSKEDGDISSSAKLESNSISNQKALILDFLKDKKDIEVVSVRVDD----GYSGS 66 Query: 57 HAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCD 116 + + AF L+ I HG + ++V+ L R RE + +L G+ I + D Sbjct: 67 NFERPAFQAMLEDIRHGIV---DCVVVKDLSRFGREYIDSGKYIERLFPALGVRFIAIND 123 Query: 117 NTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPR 176 N +I + A R L K+K+ + + Sbjct: 124 NYDSLKGKNQADEIIIPFKNLINDAYCRDISIKIRSNLEIKRKKGECVTPFVAFGYR--- 180 Query: 177 WLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAV-------------- 222 + DP ++ IFK++++ S +AIA LN+ + Sbjct: 181 --KTKTDKHKLEIDPSAGGVVQDIFKMKLQGMSQDAIANRLNELGILSPFEYKISSGSRY 238 Query: 223 -KNFSGKESA-WGPSVIEKLLANKALIGICV------PSYRARGKGISE------IAGYY 268 F KE A W + ++L N+ IG V P+++ + + I + Sbjct: 239 ETGFRQKEQALWSSVTVRRILENEVYIGNLVQGKRTTPNHKVKQTYVKPEDDWIRIEKNH 298 Query: 269 PRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVH--AVSGSLH 326 ++SD F VQ + + +S + + LL + C CG M V+G + Sbjct: 299 EPLVSDRDFEIVQRLLGMD---TRTSPDQKQVYLLSGIAVCADCGAPMTRKVSTVAGKKY 355 Query: 327 GYYVCP-MRRLHRCDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLELKIIELQ 385 YY+C + RC I ++ ++ L + I ++ + T+ + I ++ Sbjct: 356 AYYLCSTNKETKRCSSHRIPEKDLEDAVLVMLKQHIQNILHLKRVLEFIGTVPFQGINMK 415 Query: 386 MKINNLIVALSV--------APEVTAIAEKIRLLD----------KELRRASVSLKTLKS 427 + + L + + E I + K LR A S++ ++ Sbjct: 416 KRQDRLEKKKQEKERCKELRMMLYSDMKEGIVSKEDYVELHAAYGKRLRNAEESIRAIQK 475 Query: 428 KGVNSFSDFYA----IDLTSKNG--RELCRTLAYKTFEKIIINTDNKTCDIYF 474 + N +D K EL RT+ + +I + D K +I F Sbjct: 476 EMDNELEKADKANTWLDYFVKYQDIEELSRTVVVELIRQIRVY-DKKNIEITF 527 >UniRef50_UPI0001BC4A50 recombinase n=2 Tax=Fusobacterium RepID=UPI0001BC4A50 Length = 537 Score = 244 bits (622), Expect = 7e-63, Method: Composition-based stats. Identities = 107/503 (21%), Positives = 191/503 (37%), Gaps = 54/503 (10%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 ++A+ Y RFSS Q +S++ Q R I ++ K N+ Y Y+D G+S K +S Sbjct: 3 RRAVGYCRFSSDSQRE-ESIDAQLRAIRDFCKQNN--YDLIKVYKDEGISGTSTKDRES- 58 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 FL IE ++V DR +R + AI K++ ++ + ++++ + Sbjct: 59 ----FLQLIEDSKKNMFDYVIVHKFDRFARNRYDHAIYE-KILNDNKVKLLSVLERL--- 110 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 + P S+I ++ S S +K + A+ + P LD Sbjct: 111 ---NDSPESIILKSVLTGMNEYYSLNLSREIKKGLNENALKAMHTC----GIPPLGYDLD 163 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 + R ++ + + + LIF L + +IA+ LN+ + KN G+E + + I L Sbjct: 164 ENR-RYIINEKEAEAVRLIFSLAADGIGFASIARTLNERSYKNKRGRE--FKKTSIRDTL 220 Query: 242 ANKALIGICVPSYRAR----GKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNP 297 N+ IG S + R + I +P +I LFY VQ KN Sbjct: 221 LNQKYIGTYFHSLKNRDGTFRRDPILIENAHPAIIEKSLFYKVQTRFKNHLKGPRDRKNT 280 Query: 298 MLINLLRTVMKCEACGNTMIVHAVS----GSLHGYYVCPMRRLHR--CDRPSIKRDLVDY 351 L +C CG + S GS+H Y C RR C I +++++ Sbjct: 281 --TYYLTGFCRCGECGGSFSGGYRSAHIDGSVHYGYECRKRRAKENNCKNKPIFKEVLEP 338 Query: 352 NIINELLFNCSKIQPVENK-KDANETLE--------------LKIIELQMKINNLIVALS 396 I+ + + +E KD +E ++ +I +L + L+ Sbjct: 339 VILELIKSEIFAEENMEILVKDISEVIKKYKISQEQEEEYYVKEIEKLNKMVLKLLDKNL 398 Query: 397 VAPEVTAIAEKIRLLDKEL----RRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRT 452 I K E + SL+TL ++ Y + L + + L R Sbjct: 399 EGFLSDEIFRKKNKELNERILIMKEKLYSLETLDQLKEDNL-RKYLLKLKNDSTHSLNRK 457 Query: 453 LAYKTFEKIIINTDNKTCDIYFM 475 + ++II D+ + Sbjct: 458 IVESFLHEVIIYQDHIEVTLRRF 480 >UniRef50_A6P1I2 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P1I2_9BACE Length = 548 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 97/545 (17%), Positives = 188/545 (34%), Gaps = 83/545 (15%) Query: 4 AIAYMRFSSPGQMSG--DSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 A Y+R S + G S+ Q L+ E+++ + D TY D G S G + Sbjct: 13 AALYIRLSKEDESEGPSQSVQNQESLLREFVQEHRLTVFD--TYVDDGWS---GTNFDRP 67 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 +F + IE + ++ + L RL R+ + + H + I+L D Sbjct: 68 SFQRMIADIEAKKV---NMVITKDLSRLGRDYIMTGHYMERYFPEHRVRYISLLDGIDTG 124 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL- 180 +DS + +AI+ A + S ++K + K++ G + + Sbjct: 125 VDSTANDITPFRAIMNDMYAKD----ISKKIKSVKRDKQRK----GEFIGGKPVYGYKMH 176 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSG-----------KE 229 ++ V D + + IF L + S IA LN + + Sbjct: 177 PTEKNKIVIDEEVAPIVRRIFALALGGMSCRNIAVLLNREGIPTPATYANLPVAKPGPYT 236 Query: 230 SAWGPSVIEKLLANKALIGICVPSYRARGKGISE------------IAGYYPRVISDDLF 277 W I ++L N+ IG V + S+ + G + ++ + F Sbjct: 237 GLWSSERISEMLQNETYIGNMVQGRSVKISYKSKKCLKQDPANWVVVEGTHEPLVDAESF 296 Query: 278 YAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIV---HAVSGSLHGYYVCPMR 334 V+ + + +++ LL+ ++ C CG + V G Y+VC Sbjct: 297 RRVRMLLNSR----KHTRSRTYDFLLKGLIFCHECGYPLAVINRKNTRGEDVLYFVCRTY 352 Query: 335 ----RLHRCDRPSIKRDLVDYNIINEL------LFNCSKIQPVEN----KKDANETLELK 380 + C SIK V +I + N ++ P+ + +LE + Sbjct: 353 QRFTKAGVCTCHSIKEKTVTDAVIARVQEVCRGFLNPEELLPMAREAVEEARKQNSLEAE 412 Query: 381 IIELQMKINNLIVALSVA-----------PEVTAIAEKIRLLDKELRRASVSLKTLKSKG 429 + LQ +I+ L ++ + + +++ LD++L L+ K Sbjct: 413 LQALQSRIDGLTASMDRVYADRLSGLLPEEDFQRLFNRLK-LDRKLLEERRQEMELQKKS 471 Query: 430 VNSFSDFYAIDLTSKNGRE-LCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKHYPLMKV 488 + D + R L E++ + D + I F+ L +V Sbjct: 472 PVTVDDRARELVERFIQTAGESRELLVSLIERVELTEDKEII-------IKFRFAQLDEV 524 Query: 489 ISAQQ 493 +QQ Sbjct: 525 AQSQQ 529 >UniRef50_C0FPH3 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0FPH3_9FIRM Length = 556 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 98/508 (19%), Positives = 195/508 (38%), Gaps = 84/508 (16%) Query: 3 KAIAYMRFSSPGQ--MSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 KA AY+R S DS++ QR+LI +++ N D + + +D + G Sbjct: 17 KATAYIRLSYTDDHSSESDSVSNQRKLIENFVERNPDIEVVSEKIDD----GYSGIIFDR 72 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 AF E + + G I ++V+ L RL RE + ++ +G+ I + D+ Sbjct: 73 PAFKEMMQDVTDGNI---NCVIVKDLSRLGREYIETGRYLRRVFPAYGVRFIAITDSIDT 129 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 DS ++ +K I+ + S + + S KR++ G ++ Sbjct: 130 AHDSSDDLTVSVKNIMNEAYCRD----ISIKTRTSLDVKRRNGDFVGAFPVY---GYMKA 182 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAV----------------KN 224 +D + VPDP + + IF++R+E S + IA LN + K Sbjct: 183 EDNKNLLVPDPYAARVVCDIFRMRLEGASASKIASELNRLGILSPLAYKKNNGLPYAKKG 242 Query: 225 FSGK-ESAWGPSVIEKLLANKALIGICVPSYRA----RGKGIS--------EIAGYYPRV 271 ++ K + W + I ++L ++ G V + + K + + + + Sbjct: 243 YADKADCKWSATTIIRILQDETYTGTLVQGKQGTPHYKIKQMEQRPASEWVRVPDAHEAL 302 Query: 272 ISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAV--SGSLHGYY 329 I+ F VQ I+ + +S N + L ++ C CG+ M +G + YY Sbjct: 303 IARQDFDLVQRIKGLD---TRTSPNEDTVYLFSGILICGCCGSRMTRKTNRANGKEYHYY 359 Query: 330 VCPMRRLHRCDRP----------SIKRDL----------------VDYNIINELLFNCSK 363 CP + C P ++ L +D + IN+ L Sbjct: 360 YCPTGKKKGCAHPVMLKESSLIDCVRDSLKAYIGNIASLEALLTGIDQSSINQALAKEYS 419 Query: 364 IQPVENKKDANETLELKIIELQMKINNLIVALSVA-------PEVTAIAEKIRLLDKELR 416 +N++ + LE K + + ++ A + I E IR+L ++L Sbjct: 420 DHITDNERRLEQVLEFKARLYESLVGGMLTKEEYASYKAKYTKQAEDIRESIRVLKEKLT 479 Query: 417 RASVSLKTLKSKGVNSFSDFYAIDLTSK 444 + ++ +++ ++ F+ F ++ + Sbjct: 480 EVLEN-RSERNRWISQFTQFSTLETLDR 506 >UniRef50_A7VUQ9 Putative uncharacterized protein n=2 Tax=Clostridium leptum DSM 753 RepID=A7VUQ9_9CLOT Length = 514 Score = 243 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 102/470 (21%), Positives = 193/470 (41%), Gaps = 57/470 (12%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 + AY R SS +S Q ++++ ++ + Y D +S + Sbjct: 18 RVAAYARVSSDSADQLNSFATQVAYYTDFIQSKDEWEFAGL-YADEAVSGTTAD--KRDD 74 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F L G I +LV+S+ R +R + + ++ ++ + G+ V + I Sbjct: 75 FQRLLADCRAGKI---DRILVKSISRFARNTL-DCLQTVRELKQLGVAVEFEKEG----I 126 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 D+ N ++ +IL A EES S +K S++++ ++SG +T+ Sbjct: 127 DTGNMGSEMLLSIL-GSAAQEESLSISKNLKWSYRRR----MKSGDFITSKDLLGYFF-- 179 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 K VP+P V +E IF + + + IA LN +K W ++I +L+ Sbjct: 180 KNNTLVPNPKEVPIVEYIFNSYLSGKGTDEIADELNAANLKTDKKPSGRWHSTMIRYILS 239 Query: 243 NKALIGICVPSYR--------ARGKGISEIAGY-----YPRVISDDLFYAVQEIRLAPFG 289 N+ IG + R + + E++ Y +P +IS + F AVQ++ L Sbjct: 240 NEKYIGDSLVQKRYTPEDLPLRQKRNNGELSQYYIQNSHPAIISRETFEAVQQL-LNRRR 298 Query: 290 ISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHR--CDRPSIKRD 347 + M LR+ M+C CG+ H +G ++ C + R + C P+I+ Sbjct: 299 KRHPPSVEMQQTPLRSTMQCALCGSYFHKHKSNGE--NFWFCALHRKSKDLCPMPNIR-- 354 Query: 348 LVDYNIINELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTAIAEK 407 + I+ L +K+ + D T+ +++ELQ K ++ P++ + EK Sbjct: 355 --EQEILMAFLSMYNKLL---DNIDILSTMMNQLLELQAK------SVCSRPDIMDLNEK 403 Query: 408 IRLLDKELRRASVSLKTLKSKGVNSFSDFYAI----DLTSKNGRELCRTL 453 I L + + SL L++KG + F + + R+ R Sbjct: 404 ISELVTQ----NHSLSRLQAKGCIDSAIFIERSNRNNKLIEELRQELRQR 449 >UniRef50_A5ZMY9 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5ZMY9_9FIRM Length = 530 Score = 243 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 111/546 (20%), Positives = 188/546 (34%), Gaps = 91/546 (16%) Query: 7 YMRFSSPGQMS--GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFS 64 Y R S + +S+ Q +LI E++ + D + I Y D G S + F Sbjct: 8 YCRLSKDDGENKVSESIENQMKLIREYVTKSEDLEIADI-YIDDGYSGLYFAN--RPEFQ 64 Query: 65 EFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDS 124 ++ I G I ++ + + RL RE + + ++ + G+ I + D V ++ Sbjct: 65 RMMEDIYKGKIQG---VITKDISRLGREHIETSNYIERVFPSLGVRYIAILDG-VDSVHH 120 Query: 125 LNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD-K 183 NE + K + + + S K R L+ +KKR G M+ P D Sbjct: 121 SNEELAQFKTLFNDMYSRDIS--KKIRGALTAQKKR------GQFMSGFAPYGYVKDPAD 172 Query: 184 RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFS----------------- 226 + F+ D + K + IF + +E S + IAK LN + S Sbjct: 173 KHHFLVDEEAAKVVRRIFYMSLEGYSRDGIAKKLNQEGILTPSEYKRKVQGLKYANALEK 232 Query: 227 GKESAWGPSVIEKLLANKALIGICVPSYRARGKGISE------------IAGYYPRVISD 274 W I +L N+ G V + E + G + +IS Sbjct: 233 AGAKGWAYPTINVILRNRVYTGAMVQHKSEKISYKVEKYQYIPEEQQYIVEGMHEAIISK 292 Query: 275 DLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMR 334 D F VQE+ + +N ++ C CG Y C Sbjct: 293 DTFEQVQELMKKRTRTPGFNSEVRKVNPYAGIIVCGDCGYNFQRVTCRDG----YECGTY 348 Query: 335 RLHR---CDRPSIKRDLVDYNIIN------ELLFNCSKIQPVENKKDANETLELKIIELQ 385 C IK++++D + N EL S + D + ++ + E Sbjct: 349 HKKGNTVCYSHFIKKEVLDSIVKNEIQRQAELALKESDKDEILKVADRKKEVQRRCAEAD 408 Query: 386 MKINNLIVALSVAPE---------VTAIAEKIRLLDKELR--------RASVSLKTLKSK 428 +I L L+ + V + +K L + RA + L + Sbjct: 409 QQIERLQKELAAVQKYKKKTYENYVDGVLDKEEYLSYKAEYEKQDKDIRAKIQLAEQEKD 468 Query: 429 GVNSFSDFYA--IDLTSKNG--RELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKH-- 482 + Y I+ K G E+ R + + EKI++N D IVFK+ Sbjct: 469 SFGEAEESYENWIEKFIKYGTLSEVTREIVTELIEKIVVNGDKS-------IDIVFKYQS 521 Query: 483 -YPLMK 487 YP+ K Sbjct: 522 PYPVEK 527 >UniRef50_A0LPU3 Recombinase n=6 Tax=Deltaproteobacteria RepID=A0LPU3_SYNFM Length = 528 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 90/515 (17%), Positives = 178/515 (34%), Gaps = 71/515 (13%) Query: 3 KAIAYMRFSSPGQMSGD--SLNRQRRLIAEWLKVNS--DYYLDTITYEDLGLSAFKGKHA 58 + Y R S + + SL+ QR +++ + Y+D G F G + Sbjct: 16 RCAIYTRKSHEEGLEQEFNSLDAQRESAEHYIEAQRMRGWTALPDRYDDGG---FSGGNM 72 Query: 59 QSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNT 118 + L I+ G I ++V +DRLSR + + ++ + L G+ +++ + Sbjct: 73 ERPGLRRLLADIDAGKI---DVIVVYKVDRLSRS-LLDFMKMIDLFNEKGVSFVSVTQHF 128 Query: 119 VYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWL 178 S +P + ++ A E E+ + R++ K A G Sbjct: 129 -----STTDPTGRMFLGILITFAQYEREVIAERIRD----KVAAAKRRGKYCGGVPILGY 179 Query: 179 SLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESA------- 231 +D + +PD +T++ IF+ ++ S + + LN+ + + Sbjct: 180 DVDRDNKKLLVNPDEARTVQYIFRRFIQIGSAKKLGQELNEQGYRTKAWTTKKGKVRDGS 239 Query: 232 -WGPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGI 290 W + I +LL N+ IG R+ G + +I + VQ I + Sbjct: 240 EWNTAHIYRLLNNRIYIGEIAHKDRSY-------PGEHEGIIDRATWDKVQAILEDNKPV 292 Query: 291 SNSSKNPMLINLLRTVMKCEACGNTM--IVHAVSGSLHGYYVC---PMRRLHRCDRPSIK 345 S ++ L+ V++C CG M +G + YY+C R + RC I Sbjct: 293 KVSMARTKMVAPLKGVIRCGHCGCAMGPTYARKNGRHYTYYICQKDSKRTVSRCPLKRIP 352 Query: 346 RDLVDYNIINEL-------------LFNCSKIQPVENKKDANETLELKIIELQMKINNLI 392 ++ +I +L F I+ E ++ + +L+I Q + L Sbjct: 353 AGDIEQAVIEQLSAVFRTPTLVAKTYFAARDIEQAERERLFKQNAQLEIELSQAREQALE 412 Query: 393 ------VALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFS--------DFYA 438 A +T + + L K+L S + + + + + Sbjct: 413 LMKPGNDQPGKAEMLTTVNRQAVELSKQLTHVSERCRAYQGNSITEQDVSEAFQNVEGFW 472 Query: 439 IDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIY 473 DL L +K+ I ++ Sbjct: 473 EDLFPVE----RNRLIRLLVDKVEIRETGIDMELR 503 >UniRef50_B8ENV0 Resolvase domain protein n=1 Tax=Methylocella silvestris BL2 RepID=B8ENV0_METSB Length = 561 Score = 241 bits (614), Expect = 6e-62, Method: Composition-based stats. Identities = 83/519 (15%), Positives = 172/519 (33%), Gaps = 70/519 (13%) Query: 2 KKAIAYMRFSSPGQMSGD-SLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 K+A Y+R S+ Q D S+ QRR + + + + G S + Sbjct: 15 KRAALYLRVSTGRQAEADLSIPDQRRQAVAFCAARG--WQVAAEFVEPGASGTDD---RR 69 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 LD G ++V S R +R+ ++ + G+ +I++ Sbjct: 70 PELQRLLDLATGGGTP-FDVVIVHSFSRFARDHFALEYH-VRSLRKAGVRLISITQ---- 123 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 D ++P S++ + A +S+ + + ++ + +G + P S+ Sbjct: 124 --DLGDDPMSVMVRQVFALFDEYQSKENAKHTLRAMQENARQGFWNG----SKAPFGYSV 177 Query: 181 -------DDKRTAFVPDPDRVKTIELIFKLRMER------RSLNAIAKYLNDHAVKNFSG 227 + DP +T+ L+F+L + A+ +LN+H + G Sbjct: 178 VDAEQRGSKTKKRLAIDPVEAETVRLMFRLFQRGDGTNGPMGVKAVTSWLNEHGYRTRVG 237 Query: 228 KESAWGPSVIEKLLANKALIGI-----CVPSYRARGKGISEIAGYYPRVISDDLFYAVQE 282 + WG + ++L G V + +IA +I F AVQ Sbjct: 238 --ARWGIGPLHQILTRPTYKGEHRFNRKVWKTKEAKPESEQIAVPVDPIIDAATFDAVQA 295 Query: 283 IRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPM---RRLHRC 339 + + + + LL + C +CG M + + YY C + C Sbjct: 296 MLKSKNPRAMPPRVVTGPILLTGIATCASCGGGMTLRTGKYGRYRYYTCATCAQKGKSAC 355 Query: 340 DRPSIKRDLVDYNIINELLFN------CSKIQPVENKKDANET---------LELKIIEL 384 SI D +D + L KI ++ A++ L K+ + Sbjct: 356 KGRSIPMDKLDKLVTERLAEQLLTPERIGKILAGIMERQASKDEDYSGRLTALRAKLADA 415 Query: 385 QMKINNLIVALSVAPEVT---AIAEKIRLLDKELRRASVSLK----------TLKSKGVN 431 Q ++ L A+ + E++ + E A V+ + + Sbjct: 416 QGRLGRLYAAIENGIADPMDATLKERVATVKTERDIAQVAFDRAVAEMRPDVRITEDKIA 475 Query: 432 SFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTC 470 +F++ ++ K R +++ ++ Sbjct: 476 AFTEVMRANVL-KGETPFRRAYIRSVIDQVEVDDTEIRI 513 >UniRef50_UPI0001973930 site-specific recombinase n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001973930 Length = 563 Score = 241 bits (614), Expect = 6e-62, Method: Composition-based stats. Identities = 106/544 (19%), Positives = 203/544 (37%), Gaps = 84/544 (15%) Query: 3 KAIAYMRFS--------SPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFK 54 KA Y+R S S ++ DS++ QR LI E+LK + + Y D G F Sbjct: 11 KAAIYLRLSKEDGDFSISGEKLESDSISNQRMLIKEYLKKHPE-ITVVKEYCDDG---FT 66 Query: 55 GKHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITL 114 G + + F+ ++A+ G + ++V+ L R RE + K+ GI I + Sbjct: 67 GANFERPDFNRMMEAVRAGLV---DCIVVKDLSRFGREYIEAGDYIQKIFPRLGIRFIAI 123 Query: 115 CDNTVYNIDSLNEPYSLIKAILIAQRANEESEIK--SSRVKLSWKKKRQDALESGTIMTA 172 DN DS + + +L + +S + S +V+ + KR++ G+ + Sbjct: 124 NDN----YDSAQPGAADNELVLPFKNLMNDSYCRDISIKVRSNLDAKRRNGQFVGSRVVF 179 Query: 173 SCPRWLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNF------- 225 +L D + V DP ++ IFK ++E S IA LND V + Sbjct: 180 ---GYLRSPDNKNQLVIDPVAAPVVQDIFKWKIEGLSPAQIADRLNDANVPSPIEYKKAN 236 Query: 226 ---------SGKESAWGPSVIEKLLANKALIGICV------PSYRARGKGISE------I 264 + K + W I ++L N+ G V P+++ + + Sbjct: 237 GSKQRTCFQTKKVALWSAVAIYRILKNEIYTGTLVQGKTTSPNHKVKKTIVKPQSEWART 296 Query: 265 AGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVH--AVS 322 + +I+ F VQ++ L + S ++ + C CG+ M+ Sbjct: 297 ENAHEPIIAHAQFDLVQKLMLDD---TRSPSGATGVHPFSGKIYCADCGSPMVRRVSRCG 353 Query: 323 GSLHGYYVCPMRRLHR--CDRPSIKRDLVDYNI-------INELLFNCSKIQPVENKKDA 373 + Y++C + + C SIK +V + I+ + ++ +++ Sbjct: 354 EKEYAYFICGGNKSDKTSCSAHSIKESVVYDAVLAVVQGHIDAAMNMADALKRIDDMAWE 413 Query: 374 NETLEL---------KIIELQMKIN--NLIVALSVAPEVTAIAEKIRLLDKELRRASVSL 422 N +E +II+ ++ S D++++ AS ++ Sbjct: 414 NREIEKIKAKISFQEEIIDKNRRLKTGAYEDFKSDFISREEYKAFTAQFDQQIKEASDTI 473 Query: 423 KTLKSKGVNSFSDFYA----IDLTSKNG--RELCRTLAYKTFEKIIINTDNKTCDIYFMN 476 L S+ + ++ K +EL R+ + I I +NK D+ M+ Sbjct: 474 MRLTSERNSVMGGLAEQQSWLEQFRKYANIKELTRSTVVNLIDYIHIR-ENKDIDVGLMH 532 Query: 477 GIVF 480 F Sbjct: 533 CDRF 536 >UniRef50_Q67SM2 Site-specific recombinase n=1 Tax=Symbiobacterium thermophilum RepID=Q67SM2_SYMTH Length = 532 Score = 241 bits (614), Expect = 7e-62, Method: Composition-based stats. Identities = 95/514 (18%), Positives = 187/514 (36%), Gaps = 61/514 (11%) Query: 1 MKKAIAYMRFSSPGQMS-GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 +++A AY+R S+ Q G+SL Q+ + W K N Y+ Y D G SA A Sbjct: 33 LRRAAAYIRVSTGMQAEEGESLPAQQARLHAWAKENG--YVIVREYVDAGESART---AD 87 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 F L + P ++LV DR +R ++ + G++++++ T Sbjct: 88 RPQFVRMLQDAKA-QPRPFDSVLVWKWDRFARNMEDASMYKALFRRRLGVELVSITQPTP 146 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 ++ + + ++ A +S + + V + + G P Sbjct: 147 E--GAVGQLLERMLDLI----AEFQSALTAENVYSTMAYLAEQGRWLGKR-----PFGYD 195 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMER-RSLNAIAKYL-NDHAVKNFSGKESAWGPSVI 237 L D R V PD + + F++ R RS+ AIA+ + + W P+ + Sbjct: 196 LRDGR--LVIKPDEAEAVAWAFRMVARRERSVYAIAEGFGTGNPFPATLARGYKWSPTAV 253 Query: 238 EKLLANKALIGICVPSYR-----------ARGKGISE------IAGYYPRVISDDLFYAV 280 K+L N+ IG + R + +G + + +P ++ ++ F AV Sbjct: 254 RKMLQNEVYIGRATWNRRYTDIDHVDGKSTKIRGYRDPSDWITVENAHPAIVDEETFEAV 313 Query: 281 QEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPM--RRLHR 338 Q + S K+ L +++C CG+ + H S VC R H Sbjct: 314 QRVLEEYS--SRYPKSKRGEYLFWGMVRCARCGHHLTWHETKKSP-ARLVCSEYFRPRHM 370 Query: 339 CDRPS--IKRDLVDYNI---INELLFNCSK--IQPVENKKDANETLELKIIELQMKINNL 391 RP I+ ++ + I E++ + + K+ + E + K+ L Sbjct: 371 ACRPMVYIRPKDLEEAVIGAIQEIIAGAEQTPLTFAIPKQARAASPEALLAANAAKVQRL 430 Query: 392 IVALSVA-PEVTAIAEKIRLLDKELRRASVSLKTLKSKG---------VNSFSDFYAIDL 441 + A + + + +L++E R + + S +D AI Sbjct: 431 LEAYEAGAITLDDLKTRRTILEQEAERLRQAAASKDSGPDYEAQVAALRERLTDVLAILQ 490 Query: 442 TSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFM 475 + +I+I+ + + DI++ Sbjct: 491 DEEAPVAAKNQALGAVIREIVIDREAQRIDIHWR 524 >UniRef50_C1XY58 Site-specific recombinase, DNA invertase Pin n=2 Tax=Meiothermus RepID=C1XY58_9DEIN Length = 515 Score = 240 bits (613), Expect = 8e-62, Method: Composition-based stats. Identities = 102/510 (20%), Positives = 193/510 (37%), Gaps = 66/510 (12%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 ++ Y R S+ Q+ SL Q+ ++ W V Y TY D G + G Sbjct: 16 QRCALYTRVSTEEQVERYSLEAQQEVLTRWAGVLG--YEVAATYTDPG---YSGAQEDRP 70 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 A + L + G + +LV LDRL+R KV A + ++ + G+ +++ + + Sbjct: 71 ALTRLLADAQEGRFV---VVLVYRLDRLAR-KVRLAYDLIERLERCGVGLMSYSEPNINT 126 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 S+ + ++A A E + + R +L K + G + P +++ Sbjct: 127 TTSIGKA----VLGIMAVFAEWERDTFAERSRLGMHKAARM----GKYLGGIVPYGYTVE 178 Query: 182 DKRTAFVPDPDRVKTIELIFKLRME-RRSLNAIAKYLNDHAVKNFSGKESA--------- 231 D R P P+ ++ +F E S +A+ LN + +E Sbjct: 179 DGR--LAPLPEEAAVVQQMFAWVAERGWSTERVAQELNRLGIPPKYRREGRGVRGKRTAG 236 Query: 232 -WGPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGI 290 W + ++L N+ IG V R R ++ P ++ LF A QE Sbjct: 237 VWRGGGVLRILKNRTYIGEYVYGKRTRKPQPELVSVPVPPLVEPVLFEAAQEQL--SRNA 294 Query: 291 SNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLH--------RCDRP 342 + +N + LL+ +++C CG + A GYY C R RC P Sbjct: 295 LFALRNARSVYLLKGLIRCGMCGRAYVGSA------GYYACVGRTNRQASPIPEMRCTAP 348 Query: 343 SIKRDLVDYNI---INELLFNCSKIQPVENKKDANETLELKIIE------LQMKINNLIV 393 ++R ++ I I L N + +++ E+ E+ ++E L+ + L + Sbjct: 349 HVRRGELEERIWHDIRSFLLNPGEALQAFINEESPESNEVSLLERRLQALLEARARLLDL 408 Query: 394 ALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAI-DLTSKNGR----- 447 L E ++ LD +R VS++ + + + A+ L S + R Sbjct: 409 YLEGGVEKETYYARLEDLDTRVREVQVSVEAARQRSIAERQRKEALHSLESLSARLRDRI 468 Query: 448 -----ELCRTLAYKTFEKIIINTDNKTCDI 472 E + +A + E + + ++ Sbjct: 469 DRLTPEEKQAVARELVEGVTVRPGKGEVEV 498 >UniRef50_A3SXC7 Hypothetical bacteriophage protein n=1 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3SXC7_9RHOB Length = 504 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 114/435 (26%), Positives = 197/435 (45%), Gaps = 21/435 (4%) Query: 4 AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAF 63 A +Y+RFSS Q G SL RQ +W N Y L T T+ DLG+SAFKG + G Sbjct: 9 AFSYVRFSSASQAKGGSLARQTDAAQKWADENG-YLLSTTTFRDLGVSAFKGDNTSVGRL 67 Query: 64 SEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNID 123 + FLDAI+ G + G LLVE+LDR+SR+K + L+ I+ G+DV+TL +N Y + Sbjct: 68 AAFLDAIDSGAVPKGAVLLVENLDRISRDKYRKGRNILEGIIEAGVDVVTLSNNKRYTLK 127 Query: 124 SLNEP-YSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 L++ + I+ IL RA+EES KS RVK W++ E + +++ P WL L Sbjct: 128 DLDDNAMTGIEIILTFVRAHEESLTKSKRVKDGWQRNLAKVREGTRLRSSAVPSWLKLVG 187 Query: 183 --KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 +F PD+V+ ++ +++ + ++ +IAK + + GK + I ++ Sbjct: 188 TMDEPSFEFIPDKVEMVQELYRRFADGETVWSIAKGFRERGIPTLRGK--TFASGNIYRV 245 Query: 241 LANKALIGICVPSYRARGKG--ISEIAGYYPRVISDDLFYAVQEIR------LAPFGISN 292 + +KA GI + +I Y+PR++ +++ V P + Sbjct: 246 VKSKAPFGILEVGRGTKNNRTITEQIVDYFPRIVDEEIQRRVSLRLDNMGKNAKPEAKGH 305 Query: 293 SSKNPMLINLLRTVMKCEAC--GNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVD 350 +S +L V+ GN + + + Y V R R I+R ++ Sbjct: 306 TSPKRRTHGILTGVIWSPDKAGGNRAVCRKSTDGTYAY-VDNTTRKWIAKREVIERPFLE 364 Query: 351 YNIINELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTAIAEKIRL 410 + +E +DA + + + K + ++ + A I E + Sbjct: 365 GWPEIVSAYETDTTPEIEAAEDALLSAQTSFEFAERKGSERLMIAAQAD----IEEAQAV 420 Query: 411 LDKELRRASVSLKTL 425 L R +++L+ + Sbjct: 421 LKAHRRGQALALQEI 435 >UniRef50_A6D0Z7 Putative uncharacterized protein n=1 Tax=Vibrio shilonii AK1 RepID=A6D0Z7_9VIBR Length = 623 Score = 239 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 116/505 (22%), Positives = 214/505 (42%), Gaps = 36/505 (7%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 + +Y RFS+ Q G SL RQ++L E + + + + D GLSAF G H G Sbjct: 9 PQIYSYRRFSNLKQEKGRSLARQKKLTEEIAEKFNLPFNEDFLMTDKGLSAFHGHHKSKG 68 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 A FL A+E + PG+ L+VESLDRLSRE+ A L +++ I V+T D VY+ Sbjct: 69 ALGVFLAAVESKMVKPGSVLIVESLDRLSREQPYVAQATLAALVSSDITVVTATDGKVYS 128 Query: 122 IDSL--NEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTI-MTASCPRWL 178 +++ + ++I ++L RA+ ES K+ + + E + S P W+ Sbjct: 129 KETMAKDPLGTMIMSVLEMIRAHNESLTKTEKSVDFIHAEILKHEEGKVADVAGSIPFWI 188 Query: 179 SLDDK-----RTAFVPDPDRVKTIELIFKLR-MERRSLNAIAKYLNDHAVKNFSGKESAW 232 S +T F + TI L+ + ++ + L I++ L+ +K G E W Sbjct: 189 SRKPSPHKKIKTGFELNEHES-TIRLLIDMYHVQGKGLRTISRELHSLGIKAPKGGE-VW 246 Query: 233 GPSVIEKLLANKALIGICVPSYR-----ARGKGISEIAGYYPRVISDDLFYAVQEIRLAP 287 G S + + +N AL G + A+ + + YYP ++S + F ++Q ++ Sbjct: 247 GVSTLSSVFSNPALCGRHKFNLEYLKDGAKQQEAYTLELYYPPIMSAEDFESMQALKKRR 306 Query: 288 FGISNSSKNPM--LINLLRTVMK---CEACGNTMIVHAVSGSL--HGYYVCPMRRLHRCD 340 G S K+ L+ LL K C CG+++ C + Sbjct: 307 SGASKGDKSDKGGLVYLLTDYGKKSFCAKCGSSIGSQPQKQKYRIRRRLHCSKHKETEDC 366 Query: 341 RPSIKRDLVDYNIINELLFNCSK--IQPVENKKDANETLELKIIELQMKINNLIVALSVA 398 SI +D ++ + + + I +D + E ++ ++ +++ N++ L V Sbjct: 367 CKSIVQDHLEDAFLVSVARHIDYNLINTQVKPEDIIKNSE-RLEDIDLEMANVLDMLRVV 425 Query: 399 PEVTA---IAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAI-------DLTSKNGRE 448 + + + E + L++E K ++S I D + R+ Sbjct: 426 RDSKSKLKLLEDYKNLEEEKEDLVKQKTDFKQHKISSEDIKRFISKVSDARDYRNNEARK 485 Query: 449 LCRTLAYKTFEKIIINTDNKTCDIY 473 + + + KI ++ + K + Y Sbjct: 486 FVKNILMQCIRKISVHMEKKKLECY 510 >UniRef50_C5UY92 Resolvase n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UY92_CLOBO Length = 559 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 123/549 (22%), Positives = 214/549 (38%), Gaps = 97/549 (17%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVN-SDYYLDTITYEDLGLSAFKGKHAQSG 61 K Y R S G+S+ Q +L E+ ++ + L+ I YED G F GK+ + Sbjct: 2 KIAIYSRKSIFTG-KGESIENQIKLCKEYCDIHYKNENLEYIIYEDEG---FSGKNIKRP 57 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F L+ ++ I L+ LDR+SR V + L+L+ + +D I++ + + Sbjct: 58 QFQNLLNDVKSKQI---NILICYRLDRISRN-VADFSSILELLEKYNVDFISINERFDTS 113 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIM----TASCPRW 177 P + + A E E + RVK + + + SG + T+ + Sbjct: 114 T-----PTGRAMVYISSVFAQLERETIAERVKDNMIQLAKMGKWSGGQLPLGYTSEKVHY 168 Query: 178 LSLDDKRTAF---VPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGP 234 ++ + K F VP + + TI+ I+ + + S+ + K LN H K +G + + Sbjct: 169 MNEEMKEKTFIKLVPVDNELDTIQFIYNNFLTKGSILNVTKELNSHGYKTKTGID--FEI 226 Query: 235 SVIEKLLANKALI------------------------GICVPSYRARGKGISEIAGYYPR 270 + ++++L + + G + R I + Sbjct: 227 TGVKRILRSALYVKSSEFVHEYLKSKKYNVFGEANGNGYLGYNKRTDKDNIIIAVSNHKA 286 Query: 271 VISDDLFYAVQEIRLAPFGISN--SSKNPMLIN--LLRTVMKCEACGNTMI----VHAVS 322 VIS + +VQ+ A S S++N N L ++KC CG+ M+ Sbjct: 287 VISSTDWLSVQKKLDANIKRSKETSNRNGTGCNDTLFSGLLKCGKCGSNMVIKYNGKNKD 346 Query: 323 GSLHGYYVCPMRRLH----RCDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLE 378 G + YY C + RCD P+++ DLVD I+N + I E K +E LE Sbjct: 347 GISYIYYTCSNKEKKYLTNRCDIPNLRSDLVDPIIVNNIKIYNKDILIKEYKNKLSELLE 406 Query: 379 L-----------KIIELQMKINNLIVALSVA----------PEVTAIAEKIRLLDKELRR 417 +I + + + NL+ LS ++ I ++I L + Sbjct: 407 NSDKQIINDLKSQINDKEKQARNLVTELSKTESEDVKVLYRAQIDEIIKEINKLKSIISS 466 Query: 418 ASVSLKTLKSKGVN------SFSDF-----YAIDLTSKNGRELCRTLAYKTFEKIIINTD 466 + + LK +N SF DF AID+ K RTL EK+ + D Sbjct: 467 SEETQLQLKDTIMNIKHLIQSFIDFNNYFDNAIDINIK------RTLLRNIVEKVTYDAD 520 Query: 467 NKTCDIYFM 475 K ++ F Sbjct: 521 KKDFNVNFF 529 >UniRef50_C4Z7Z8 Site-specific recombinase n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4Z7Z8_EUBR3 Length = 496 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 96/513 (18%), Positives = 183/513 (35%), Gaps = 57/513 (11%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 ++ Y+R S+ Q S + QRRL+ E+ N+ + +E+ G+S K + Sbjct: 4 LRTGALYIRVSTDKQEE-LSPDAQRRLLLEYAAKNNIILSNEYIFEEDGISGRKAD--KR 60 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 F + + P +LV R +R + + + L+ + ++VI++ + V Sbjct: 61 PNFQRMIGLAKSKE-HPFDAILVWKFSRFARNQEESIVYK-SLLRKNNVEVISVSEPLV- 117 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 + P+ + +I S S V + AS P S+ Sbjct: 118 -----DGPFGTLIERIIEWMDEYYSIRLSGEVTRGMTENAMRG-----NFQASPPLGYSI 167 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRME-RRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEK 239 + V K + +IF L E S+ I + LN K +GK ++ I+ Sbjct: 168 TAHKATPVIVESEAKIVRMIFNLYTEQGYSIIEITRQLNALGYKTRAGK--SFENRGIKY 225 Query: 240 LLANKALIGICVPSYR---ARGKGISEI---AGYYPRVISDDLFYAVQEIRLAPFGISNS 293 +L N+ G V + R +R K +E G + +IS + F + + + + Sbjct: 226 ILTNEVYTGKSVWNKRDSASRPKDKTEWIIADGAHEPIISPEQFQRAKVRLESNYRPRYA 285 Query: 294 SKNPMLINLLRTVMKCEACGNTMIVH----AVSGSLHGYYVCPMRRLHRCD-RPSIKRDL 348 + + + L ++KC ACG ++ + G + Y C +C+ +I Sbjct: 286 KPSGVCSHWLSGIVKCSACGRSLSISLAGANKQGKRYIYLQCYGYLKGKCNVSHAISEKK 345 Query: 349 VDYNII---------NELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVA-LSVA 398 + ++ L F N A + + ++ EL K + +A + Sbjct: 346 IVPMVLAALKDAISSENLSFKVINTDSQSNYPAAIDIYQNQLDELTKKEKRIKMAYMDGI 405 Query: 399 PEVTAIAEKIRLLDKELRRASVSL-------------KTLKSKGVNSFSDFYAIDLTSKN 445 + + LL +E + + L+SK + DL+ Sbjct: 406 DTIEEYRKNKELLLEERKSIESRINALPKPAAKSDTTAALRSKIKTVYDSLLNEDLS--- 462 Query: 446 GRELCRTLAYKTFEKIIINTDNKTCDIYFMNGI 478 + L EKI+ N T D+YF Sbjct: 463 -MQTRNDLLKSVVEKIVFNKKEATIDVYFYTSN 494 >UniRef50_Q8NYW8 Cassette chromosome recombinase B n=83 Tax=Bacillales RepID=Q8NYW8_STAAW Length = 542 Score = 237 bits (604), Expect = 9e-61, Method: Composition-based stats. Identities = 88/477 (18%), Positives = 184/477 (38%), Gaps = 58/477 (12%) Query: 2 KKAIAYMRFSSPGQM-SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 K+ Y+R S+ Q G S++ Q I E+ + + Y D G+S GK Sbjct: 7 KRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHH--FEVKDIYADRGIS---GKSMNR 61 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 L + GYI ++V +RL+R + ++ ++ + ++ +L + Sbjct: 62 PELQRILKDAKDGYI---DCVMVYKTNRLARNT-SDLLKIVEDLHKQNVEFFSLSERMEV 117 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 N S + ++A + E V + ++ Q+ G + + + Sbjct: 118 NTSSGK-----LMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQGNLPLG----YDKI 168 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 + + + + ++ IF+ + IA LN GK + S I + Sbjct: 169 PNSKHELMINQHEANIVKYIFESYAKGHGYRKIANALNHKGYVTKKGKP--FSISSITYI 226 Query: 241 LANKALIGICVPSY-----RARGKGISEI----AGYYPRVISDDLFYAVQEIRLAPFGIS 291 LAN IG + R KG+++ G + +I+ DL+ VQ + Sbjct: 227 LANPFYIGKIQFAKYKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKP 286 Query: 292 NSSKNPMLINLLRTVMKCEACGNTM-------IVHAVSGSLHGYYVCPMRRLHR---CDR 341 + NLL ++ C CG M + + YY C R C Sbjct: 287 QV--HGKGTNLLTGIIHCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSA 344 Query: 342 PSIKRDLVDYNIINELLFNCSKIQPVE------NKKDANETL---------ELKIIELQM 386 S++ ++++ ++ ++L + +E N+++ + + + E+Q+ Sbjct: 345 NSVRANVIEDYVMKQILEIVKSDKIIERVVARVNQENQVDCASLHHDIAYKQQQYDEVQI 404 Query: 387 KINNLIVALSVAPEVTAIAE-KIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLT 442 K+NNLI + P++T++ I+ +K+L + + LK++ + F A +++ Sbjct: 405 KLNNLIKTIEDNPDLTSVIRPSIQKYEKQLNDITYQINQLKNQQNEDKTLFDAKEIS 461 >UniRef50_A5TXM5 Possible recombinase n=3 Tax=Fusobacterium RepID=A5TXM5_FUSNP Length = 510 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 96/504 (19%), Positives = 184/504 (36%), Gaps = 53/504 (10%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 M++A+AY RFSS Q +S++ Q R I E+ N+ + Y+D +S K + Sbjct: 1 MRRAVAYCRFSSSNQRE-ESIDAQIRAIKEYCNKNNFKLI--RIYKDEAISGTSTKDRE- 56 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 FL+ I ++V DR +R + A+ K++ ++ + +I++ + V Sbjct: 57 ----MFLEMILDCKKNLFDCVIVHKYDRFARNRYDHALYE-KILNDNNVKLISVLEQLVD 111 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 + P S+I ++ S+ S VK K+ A+ +G P L Sbjct: 112 -----DSPESIILKSVLTGMNEYYSKNLSREVKKGKKENALKAIHNG----GIPPLGYDL 162 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 D + + + + ++LIF+L ++ +IA LN KN GKE + I Sbjct: 163 DKNKKY-IINKKEAEAVKLIFELALDGVGYVSIADILNKKGYKNKRGKE--FRKISIRDT 219 Query: 241 LANKALIGICVPSYRAR----GKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKN 296 L N IG + K I + +I D+FY VQ + Sbjct: 220 LLNIKYIGTYYYGLKDGHGKLQKEPIIIENSHEPIIDKDIFYKVQAKMKKNLKGPRNRNG 279 Query: 297 PMLINLLRTVMKCEACGNTM-----IVHAVSGSLHGYYVCPMRRLH--RCDRPSIKRDLV 349 L C CG V+ +GYY C ++ +C+ +I+++L+ Sbjct: 280 --QFYFLTGYCICGECGGPFSGGYRTVNRNGSISYGYY-CQKKKRKETKCNNKAIRKELI 336 Query: 350 DYNIINELLFNCSKI---------------QPVENKKDANETLELKIIELQMKINNLIVA 394 + I + + K++ + +I +LQ + L+ Sbjct: 337 ESFIFDIIKKEVFSDDKIEKIIKDIISFSKNKNIKKEEEIKEYTKEIEKLQKMLLRLLEK 396 Query: 395 LSVAPEVTAIAE-KIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGREL--CR 451 V I K L++ ++ + ++K+ + ++ K R Sbjct: 397 NLEGHVVDEIFNVKNTELNERIQVLREKIYSIKNITEINENELREYLKKFKESANEHGKR 456 Query: 452 TLAYKTFEKIIINTDNKTCDIYFM 475 + ++I + D + Sbjct: 457 KVVEAFVQEIRVYRDKIKIALRKF 480 >UniRef50_A5Z6W6 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5Z6W6_9FIRM Length = 542 Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 84/436 (19%), Positives = 160/436 (36%), Gaps = 58/436 (13%) Query: 3 KAIAYMRFS--SPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 KAI Y+R S + DS+ QRRLI +++ + + + +D + G Sbjct: 5 KAIKYIRLSYTDDKTVESDSVANQRRLIDDYIARHPEIEVVAEKIDD----GYSGVLFDR 60 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 AF E + IE G ++V+ L RL RE + ++ +G+ I + DN Sbjct: 61 PAFQEMMRMIEQG---EANCVIVKDLSRLGREYIETGRYMRRVFPAYGVRFIAINDNVDT 117 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 D+ ++ +K I+ + S + + + + KR+ G ++ + Sbjct: 118 ENDAADDLTVSVKNIMNEAYCRD----ISVKTRSALEVKRRSGDFVGAFTIY---GYVKV 170 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNF--------------- 225 DK + D + IF+ R+E S + IA LN + + Sbjct: 171 GDKHKSLEVDEYAANVVRDIFRKRLEGFSASHIADELNRLGILSPLAYKRNHGMPHAKGG 230 Query: 226 --SGKESAWGPSVIEKLLANKALIGICVPSYRA---------RGKGISE---IAGYYPRV 271 K+ W + I ++L ++ G V + K SE + G + + Sbjct: 231 YTDRKDCKWSATTIIRILQDETYTGTLVQGKQTTPHFKLKEREDKPSSEWIRVEGTHEAI 290 Query: 272 ISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAV--SGSLHGYY 329 I F VQ +R + +S + L ++ C CG M + YY Sbjct: 291 IQKHDFDLVQRLRRID---TRTSPKSDKVYLFSGILICGCCGCRMTRKTNRYKDKEYHYY 347 Query: 330 VCPMRRLHRC-DRPSIKRDLVDYNIINEL------LFNCSKIQPVENKKDANETLELKII 382 CP + + C +K + + + L + + + +++ N L + Sbjct: 348 YCPTGKKNGCTSSVMLKESDLIECVQDSLKGHIENVASLDALLSSISQERINREL-AQEY 406 Query: 383 ELQMKINNLIVALSVA 398 Q+++N VA + Sbjct: 407 AAQIRVNEKRVAQTEG 422 >UniRef50_Q07ZW2 Recombinase n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q07ZW2_SHEFN Length = 601 Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 113/463 (24%), Positives = 189/463 (40%), Gaps = 44/463 (9%) Query: 4 AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNS---DYYLDTITYEDLGLSAFKGKHAQS 60 Y RFSS GQ SL RQ +WLK + + +D + D G+SAF GKH +S Sbjct: 25 VYLYQRFSSIGQDGNSSLFRQGEAQRDWLKNHPHCIETEIDNSPFIDAGVSAFSGKHLES 84 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 G+ + AIE I PG+ +LVE RLSR + E L I +H + ++T D VY Sbjct: 85 GSLGRLVAAIESKAIPPGSIILVEHFSRLSRMNISETGRLLDRIWDHDVTIVTARDKAVY 144 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 + ++ + ++ I+ +A+ +S+ +S +VK SW ++ +A ++ P WL Sbjct: 145 SPAMRDDMSTRLRLIIEIDKAHSDSKWRSEKVKSSWTRRAFNAEDNDIPPKMRMPFWLDK 204 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 + K + ++ IF+L ++ I + L K P+ ++ Sbjct: 205 NGKLNEYE------SLVKKIFELYLDGFGQVRIERELKKLFPGAKPLKNV--NPTKFIRI 256 Query: 241 LANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLI 300 + N+ IG V R Y VI D F++ QEI S + Sbjct: 257 ILNRKCIGE-VYGKRL-----------YEPVIDDATFFSAQEIHSKRLYKSVKADRRW-- 302 Query: 301 NLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHR---CDR----PSIKRDLVDYNI 353 LR ++ C CG+ M + S SL C ++ CD P I D Y+ Sbjct: 303 -PLRGLITCGHCGSGMSIQQSSNSLPL-LRCSNKQRSGGSNCDSAATFPYIIADYFFYHT 360 Query: 354 INELLF-NCSKIQPVENKKDANETLELKIIELQMKINNL----IVALSVAPEVTAIAEKI 408 + LL S + E + I + +L + ++ I K Sbjct: 361 VEPLLLVMLSNRKKQEKNNLRANEIVADINKKNKASKDLDVLYLEIVNEGKNGNFITRKQ 420 Query: 409 RLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCR 451 L++E++ + L+ ++ + + + I SK EL R Sbjct: 421 LELEEEVKSLTSELEQIRHDV--AINRSFRI---SKEALELTR 458 >UniRef50_C7G6N5 DNA integration/recombination protein n=2 Tax=Clostridiales RepID=C7G6N5_9FIRM Length = 552 Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 92/502 (18%), Positives = 181/502 (36%), Gaps = 64/502 (12%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 +A+ Y R+SS GQ +S+ Q R E+ K + + Y D A G+ + Sbjct: 27 RAVIYARYSSSGQRE-ESIEGQLRDCYEFAKKHG--IIVIGEYIDK---AMTGRVDRRPD 80 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F + E G +L+ +DR +R + A+ + K + +GI + Y Sbjct: 81 FQRMMKDSEKGRF---NCVLLWKMDRFARNRYDSAMYKYK-LKKNGIRIF-------YAK 129 Query: 123 DSL-NEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 +++ + P +I ++ A SE + VK + G L Sbjct: 130 ETIPDGPEGIILESVMEGYAEYYSENLAQNVKRGNYDSALELKTLGKTC-----LGLKTG 184 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 ++ D + IF+ E I + LN + G + + + ++L Sbjct: 185 PD-GRYMIDQAEAAIVRRIFEEYAEGERAKDIYERLNSEGYRTSRG--GKFNKNSLRRIL 241 Query: 242 ANKALIGICVPSYRARGKGISEIAGYYPRVI-SDDLFYAVQEIRLAPFGISNSSKNPMLI 300 +NK IG+ + P +I DLF VQ++ K Sbjct: 242 SNKKYIGVYEYEDIY-------VENGIPAIITDRDLFERVQKMLKINHDAPARGKAQNF- 293 Query: 301 NLLRTVMKCEACGNTMI---VHAVSGSLHGYYVCPMRRLHR-CDRPSIKRDLVDYNIINE 356 LL T + C CG+ MI + +G + YY C R+ R C + S+ +D ++ ++ E Sbjct: 294 -LLTTKLFCGLCGSPMIGDGGTSHTGKAYAYYSCTKRKRGRSCKKESVPKDWIEDLVVGE 352 Query: 357 LLFNCSKIQPVENKKDAN-------------ETLELKIIELQMKINNLIVALSVAPEVTA 403 L+ + +E D LE++ E + I+N++ A+ + Sbjct: 353 LVKIVHNDELIEQIADRVMEYQKREKDQSGLHALEIRQKENEKAISNMLAAIEAGIITPS 412 Query: 404 IAEKIRLLDKELRRASVSL--------KTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAY 455 ++ L+ + + + + + + F + D+ + R + L Sbjct: 413 TKTRLMELEADRADIEKGIAHELLAEPEFERDQIIYFLERFRSGDINDEAYRIM---LVD 469 Query: 456 KTFEKIIINTDNKTCDIYFMNG 477 + + D+ + +G Sbjct: 470 TFLNSVYLYDDDHLVLVMNYSG 491 >UniRef50_C2Z4G3 Site-specific recombinase for integration and excision n=2 Tax=Bacillus cereus RepID=C2Z4G3_BACCE Length = 477 Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 88/485 (18%), Positives = 176/485 (36%), Gaps = 54/485 (11%) Query: 3 KAIAYMRFSSPGQM-SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 + Y R S+ Q G S++ Q++ + + + Y D G+SA K+ Sbjct: 2 RCAIYARVSTEEQAVEGYSISAQKKKLKAYCDA--QEWDVVGYYVDEGISA---KNTNRP 56 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 ++ IE G I +LV LDRL+R V + L + + + + Sbjct: 57 ELKRMIEHIEKGLI---DCVLVHRLDRLTRS-VLDLYTLLDVFEEYDCKFKSATE----V 108 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 D+ L I+ A A E E RV++ ++K + G + P + D Sbjct: 109 YDTTTAIGRLFITII-AALAQWERENIGERVRVGQQEK----VRQGKYTSPRKPYGYNAD 163 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 K + K + I+ ++ S I+K LN + W + +L Sbjct: 164 HKEGILTIIEEEAKVVRSIYNDYLKGHSATRISKRLNA----TKTAGRDYWNEKAVMYIL 219 Query: 242 ANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLIN 301 N IG R + E+ P +I +++F +VQ +R + + ++ Sbjct: 220 ENPLYIGTLRW--RKETEHYFEVPNSVPAIIEEEMFNSVQILRES--RQESHPRSQYGSY 275 Query: 302 LLRTVMKCEACGNTMIVHAV-------SGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNII 354 + ++KC CG ++I + V + + +Y C R+L+ C ++ ++ II Sbjct: 276 IFSGILKCPRCGRSLIGNYVVSKNKDGTKIKYKHYYCKGRKLNVCTMGNMSERKLEQAII 335 Query: 355 NELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVA-----------LSVAPEVTA 403 +L E+ K N E +I +++ ++ + E T Sbjct: 336 PHILSFYIDA-TDEDVKLENSNTENEIEQIKSELKIIEKRRKKWQYAWANDHLKDEEFTE 394 Query: 404 IAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAI--------DLTSKNGRELCRTLAY 455 ++ +K L LK ++K + + + +L + + + + Sbjct: 395 FMQEENEKEKVLTEELYKLKPAENKKLQNEELKNILKDIKLNWANLNDEEKKIFMQIILK 454 Query: 456 KTFEK 460 K + Sbjct: 455 KLVIE 459 >UniRef50_A5ZPV0 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZPV0_9FIRM Length = 580 Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats. Identities = 78/396 (19%), Positives = 149/396 (37%), Gaps = 37/396 (9%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 K Y+R S+ Q+ DS+ Q++ + + + L T YE + + GK+ A Sbjct: 19 KVAIYIRVSTIHQVDKDSIPMQKKDLIAYCQ----LILGTDNYEIFEDAGYSGKNTDRPA 74 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F + + I G T +LV +DR+SR + A E + + + + ++ + Sbjct: 75 FQDMMGRIRKGEF---THVLVWKIDRISRNLLDFA-EMYEELQSLRVTFVSKNE----QF 126 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 D+ + I++ A E + S RV + + + +G P S D Sbjct: 127 DTSTAIGEAMLKIVL-VFAELERNMTSERVTATMISRANNGQWNG----GRIPFGYSYDS 181 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 + F D + L ++ +SL A+ LN K +G + W P+ + + + Sbjct: 182 GTSTFSIREDEAVVCRRLKDLYLDNKSLVYTARALNADGYKTRAGAD--WTPTAVWIIAS 239 Query: 243 NKALIGICVPSYRARGKGISE--------IAGYYPRVISDDLFYAVQEIRLAPFG----I 290 + GI + + + I ++P + + + A++ Sbjct: 240 SPFYAGIYRYNRYKGTENRTLNPEEEWVMIPEHHPAIFTLEEHEAMKSSLKTNARYVDNP 299 Query: 291 SNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGY----YVCP-MRRLHRCDRPSIK 345 I++ + + C CGN M+ GY Y CP RR +CD ++ Sbjct: 300 VGKPHATANIHIFQGIAYCGKCGNKMVSTPGKKHADGYRPSNYSCPLHRRSKKCDNATVN 359 Query: 346 RDLVDYNIINELLFNCSKIQPVENKKDANETLELKI 381 +V IN +L + + N D E L+ + Sbjct: 360 DMIVGEFAINYILNMLNAKKTFSNI-DTPEELQRHL 394 >UniRef50_Q2JCD2 Resolvase-like n=3 Tax=Actinomycetales RepID=Q2JCD2_FRASC Length = 665 Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats. Identities = 78/453 (17%), Positives = 151/453 (33%), Gaps = 50/453 (11%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 + Y+R S+ + S+ Q + ++ + + + + D G + Sbjct: 26 RVGIYLRRSTDDEHQPYSIEAQEERLRSYIDSQPGWAI-ALRFSDDA----SGATTERDD 80 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 L A HG I LLV +DRLSR + + + L+ + G+ + + Sbjct: 81 LQRALSAARHGLI---DVLLVYRVDRLSRN-LRDTVTLLEELDQAGVVFRSATEPFDTAT 136 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 P + ++A A E + RV ++K L M + P +D Sbjct: 137 -----PMGRMLLQMLAMFAQFERDTIIDRVIAGMERKAAKGLW----MGGNRPFGYQVDR 187 Query: 183 KRTAFVPDPDRVKTIELIFKLRM-ERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 + D + LIF L + ER AIAK LN+ + +G W + ++L Sbjct: 188 ANWKLLVDEKEAPVVRLIFNLYVKERVGTRAIAKTLNERGHRTTTG--GPWSGHQVLRVL 245 Query: 242 ANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLIN 301 N+ +G + + +I F ++I Sbjct: 246 DNRIYLGELTFREIT-------VTDTHKPIIEAAQFAEAEKILTIRSDGHTHRAASDSDY 298 Query: 302 LLRTVMKCEACGNTMIVHAVSG--SLHGYYVCPMRRLH---RCDRPSIKRDLVDYNIINE 356 L M+C C M+ G + YY C R + RCD P + D +D ++ Sbjct: 299 YLTGRMRCPQCAKAMLGSNAGGRNRTYRYYTCFTRLRYSRDRCDAPRLDADALDQAVLTA 358 Query: 357 LLFNCSKIQPV----------------ENKKDANETLELKIIELQMKINNLIVALSVAP- 399 L Q + ++ T++ + + I+ + A Sbjct: 359 LAAFYRDHQQLISDAVHHARQRHHDAHADRTGELATVQADLTQTDQAIDRYLSAFERGTL 418 Query: 400 EVTAIAEKIRLLDKELRRASVSLKTLKSKGVNS 432 + +A ++ L + ++ L ++ + Sbjct: 419 DEETLATRLATLRTKQKQLRRRQTELTAQIDDE 451 >UniRef50_UPI00019734DD site-specific recombinase n=1 Tax=Clostridium sp. M62/1 RepID=UPI00019734DD Length = 507 Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats. Identities = 79/403 (19%), Positives = 149/403 (36%), Gaps = 48/403 (11%) Query: 5 IAYMRFSSPG--QMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 Y+R S + DS+ QR+L+ ++LK + L + Y D G S + A Sbjct: 15 AVYIRLSREDGDKAESDSVGNQRKLLMDFLKSEPELSLFS-EYVDDGWSGTS---FKRPA 70 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F + IE G + + V+ L RL R+ + + + G+ I+L D I Sbjct: 71 FERMIRDIEAGLV---DCVAVKDLSRLGRDYIDTGRLLERYFPDMGVRFISLADG----I 123 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 DS + Y ++ I +I S ++ + K++ G C + Sbjct: 124 DSRKQEYDMLLPIKNIFNEQYARDI-SRKIHAVVRTKQKAGEFIGAFA---CYGYRKSPS 179 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFS---------------- 226 + V D + + +IF+L +E + N IA+ LND + S Sbjct: 180 DKNRLVVDERAAEVVRMIFQLFLEGKGKNTIARMLNDRGIPCPSEYKRLNGENYRNGGRL 239 Query: 227 GKESAWGPSVIEKLLANKALIGICVPSYR----------ARGKGISEIAGYYPRVISDDL 276 +S W S + K+L ++ +G V R + + G + +I + Sbjct: 240 SGQSCWTYSTVNKILHSEMYLGNMVQGRRFQRMRGKARQVDRENWIVVEGTHEAIIDRQV 299 Query: 277 FYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRL 336 + +++ + + + N+ ++C CG M+ L G YV + Sbjct: 300 WEQTRKLLKSRYAPFQPA---AGENVFAGFIRCGDCGRAMVRKGRDRYLCGTYVRAGKAY 356 Query: 337 HRCDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLEL 379 C +KR ++ ++ EL + Q + + E E Sbjct: 357 --CSGHGVKRQELEEIVLAELARAVEEEQQRGSLAELFERAEK 397 >UniRef50_D1N7I8 Resolvase domain protein n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N7I8_9BACT Length = 432 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 86/367 (23%), Positives = 150/367 (40%), Gaps = 38/367 (10%) Query: 2 KKAIAYMRFSSPGQMSG--DSLNRQRRLIAEWLKVN--SDYYLDTITYEDLGLSAFKGKH 57 K+ I Y R S + +SL+ QR+ +++ + + L Y+D G F G Sbjct: 6 KRCIVYTRKSHEEGLDQAFNSLDAQRQACESYIQSQQFNGWELMPKRYDDGG---FSGGT 62 Query: 58 AQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDN 117 + A E L IE G + +++ +DRLSR V A E HG+ +++ Sbjct: 63 LERPALKELLADIEAGNV---DVVVIYKIDRLSRSLVDFA-ELQSRFEKHGVSFVSVTQ- 117 Query: 118 TVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRW 177 ID+ ++ IL A E EI + R++ R+ G + P Sbjct: 118 ---QIDTSGSTGRMMLNIL-MTFAQYEREIIADRIRDKMAATRKQ----GKFAGGTLPYG 169 Query: 178 LSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVI 237 ++K+ V D + ++ IF+ +E +S IA LN + ++ +G+E W S I Sbjct: 170 YKSENKK--MVVRQDEAEVLKRIFQRYLEIQSPKQIAMELNSNGLRIRTGRE--WNTSHI 225 Query: 238 EKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNP 297 + L + A IG + KG G + +I + + VQ + K Sbjct: 226 YRQLNSYACIG------KVEYKGQI-YDGEHEAIIPLETWNEVQRLLKINAATPKGGKTR 278 Query: 298 MLIN-LLRTVMKCEACGNTMIVH---AVSGSLHGYYVC---PMRRLHRCDRPSIKRDLVD 350 +N L+ +++C CG M+ H G + YY+C R C I ++ Sbjct: 279 ESVNAPLKGILRCGHCGCAMMPHYARKSDGRKYYYYICQKDSKRGKADCPVHRIPGSDIE 338 Query: 351 YNIINEL 357 +++EL Sbjct: 339 NLVMDEL 345 >UniRef50_C0M6W3 Putative phage integrase n=1 Tax=Streptococcus equi subsp. equi 4047 RepID=C0M6W3_STRE4 Length = 477 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 103/503 (20%), Positives = 192/503 (38%), Gaps = 60/503 (11%) Query: 2 KKAIAYMRFSSPGQMS-GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 +K Y+R S+ Q G S+ Q + ++ + ++ Y D G F G Sbjct: 5 RKVAIYVRVSTTNQAEEGYSIQGQIDSLIKYCEAMG--WIIYEEYTDAG---FSGGKIDR 59 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHG-IDVITLCDNTV 119 A S+ + +H T+LV LDRLSR V + + +K + N I ++L +N Sbjct: 60 PAMSKLITDAKH---KRFDTILVYKLDRLSRS-VRDTLYLVKDVFNQNNIHFVSLQEN-- 113 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 ID+ + +L +L A A E E + R+ + K A T+ P Sbjct: 114 --IDTSSAMGNLFLTLLSA-IAEFEREQITERMTMG---KIGRAKSGKTMAWTYTPFGYD 167 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEK 239 + ++ + DP + +++I+ ++ S+ I LN +GK+ W P ++ Sbjct: 168 YNKEKGELILDPAKAPIVKMIYTDYLKGMSIQKIVDKLNKMDY---NGKDCTWFPHGVKH 224 Query: 240 LLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPF---GISNSSKN 296 LL N G+ + + G + +I+ +LF Q R ++ + Sbjct: 225 LLDNPVYYGMTRYNNKL-------FPGNHQPIITKELFDKTQRERQRRRLGIEENHYTIP 277 Query: 297 PMLINLLRTVMKCEACGNTM-----IVHAVSGSLHGYYVCPMRRLHR---CDRPSIKRDL 348 +L ++C CG+ M G Y C R R CD P + Sbjct: 278 FQAKYMLSKFLRCRQCGSRMGLELGRPRKKEGKRSKKYYCLNSRPKRTASCDTPLYDAET 337 Query: 349 VDYNIINELLFNCSKIQPVENKKDANETLELK----IIELQMK-------------INNL 391 ++ +++E+ K + +++ E ELK IE + +N+L Sbjct: 338 LEDYVLHEIA-KIQKDPSIASRQKHIEDHELKYKRERIEANINKTVNQLSKLNNLYLNDL 396 Query: 392 IVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCR 451 I + + + K RLL+ EL + + L + + +DF A+ E + Sbjct: 397 ITLEDLKTQTNTLIAKKRLLENELDKTCDNDDELDRQ--ETIADFLALPDVWTMDYEGQK 454 Query: 452 TLAYKTFEKIIINTDNKTCDIYF 474 +++ ++ DN F Sbjct: 455 YAVELLVQRVKVDRDNIDIHWTF 477 >UniRef50_C6JB72 Resolvase domain-containing protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JB72_9FIRM Length = 581 Score = 233 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 87/424 (20%), Positives = 169/424 (39%), Gaps = 54/424 (12%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 K Y+R S+ Q+ DS+ Q++ + + + L T YE + + GK+ A Sbjct: 19 KVAIYIRVSTIHQVDKDSIPMQKKDLIAYCQ----LILGTDNYEIFEDAGYSGKNTDRPA 74 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F + I G T +LV +DR+SR + A E + + + + ++ + Sbjct: 75 FQNMMGRIRKGEF---THVLVWKIDRVSRNLLDFA-EMYEELRSLRVTFVSKNE----QF 126 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 D+ + I++ A E + S RV + + +G P S D Sbjct: 127 DTSTAIGEAMLKIIL-VFAELERNMTSERVTATMISRANSGQWNG----GRIPFGYSYDP 181 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 K F D + L + RSL +++ LN+ K +G +W P + + + Sbjct: 182 KEKVFSIREDEASICRELKDLYLLNRSLVYVSRALNEKGYKTRAG--VSWSPHSVWIIAS 239 Query: 243 NKALIGICVPSYRARGKGISE-----------IAGYYPRVISDDLFYAVQEIRLAPFG-- 289 + GI + R KG+ I ++P + + + A++ I + Sbjct: 240 SPFYAGIYRYN---RYKGVESRTINPEEEWVMIQNHHPAIFTLEEHQAMRSIMKSNQRNM 296 Query: 290 --ISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGY----YVCPMRRL-HRCDRP 342 + ++ + +M C+ CG+ M+ + GY Y CP+RR +C+ P Sbjct: 297 DNLPGRVHLSTKTHIFQGIMYCDKCGSKMVSTPGRLHVDGYRTSNYGCPLRRNTKKCNNP 356 Query: 343 SIKRDLVDYNIINELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVT 402 ++ ++ +IN +L N +A +T I ++N +++ SV EV+ Sbjct: 357 TVNDIIIGEFVINYIL----------NMLNAKKTF--STINTPDELNAALLSGSVFSEVS 404 Query: 403 AIAE 406 ++ E Sbjct: 405 SVEE 408 >UniRef50_Q3SMV6 Resolvase n=4 Tax=Rhizobiales RepID=Q3SMV6_NITWN Length = 561 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 88/470 (18%), Positives = 167/470 (35%), Gaps = 59/470 (12%) Query: 1 MKKAIAYMRFSSPGQMSGD-SLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 M +A YMR S+ Q D S+ QR + W + + Y + + G SA + Sbjct: 22 MHRAALYMRVSTGRQAEHDLSIPDQRHQLQSWCRAHG--YEPAAEFVEAGASATDD---R 76 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 F + ++ G ++V S R RE + L+ + H + V+++ Sbjct: 77 RPIFQQMIERACDGE-NAFDVIIVHSYSRFFREAFEQEFY-LRKLARHKVRVVSITQP-- 132 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 + NEP + +IA +S + V S K+ + +G A+ P Sbjct: 133 --VGDENEPVHAMMRKVIALFDEYQSRENAKHVIRSMKENARQGFWNG----ATAPLGYK 186 Query: 180 LDDK-------RTAFVPDPDRVKTIELIFKLRMER------RSLNAIAKYLNDHAVKNFS 226 L + + D + + LI+KL + + + K+LN + + Sbjct: 187 LVEAEKRGTKIKKKLDVDAVEAEYVRLIYKLYLYGDGTSGALGIKEVVKWLNRNGYRTRR 246 Query: 227 GKESAWGPSVIEKLLANKALIGICVPSY-----RARGKGISEIAGYYPRVISDDLFYAVQ 281 G +G + + K+L N IG + R R + P +I +F VQ Sbjct: 247 G--QTFGVAGVHKVLTNTVYIGEWQFNVTSSRTRQRKPDTEIVKIAVPAIIEPHVFEQVQ 304 Query: 282 EIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAV---SGSLHGYYVCPM-RRLH 337 A + + LL + C C M + +G++H YY C R Sbjct: 305 AQLRARSPRVVAPRLTTGPILLTGLAVCATCAGAMTLRTGTSSTGAVHRYYTCSTCARKG 364 Query: 338 R--CDRPSIKRDLVDYNIINELL---------------FNCSKIQPVENKKDANETLELK 380 + C SI D +D + L+ + E++ L+ + Sbjct: 365 KSVCKGRSIPMDKLDGLVTEHLVERLLQPERLAVMLSSLKARRAAKAESENKRIMALQRE 424 Query: 381 IIELQMKINNLIVALSVAP-EVTAIAE-KIRLLDKELRRASVSLKTLKSK 428 + E ++ L + ++ + + ++ L + RA +L+ S+ Sbjct: 425 VSEADERLKRLYRLVEDGVTDLDEVLQGRLSQLKADRDRARAALEATTSR 474 >UniRef50_C7GGS5 Site-specific recombinase, phage integrase family n=2 Tax=Roseburia RepID=C7GGS5_9FIRM Length = 551 Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 98/515 (19%), Positives = 176/515 (34%), Gaps = 59/515 (11%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 K Y R S+ Q S Q E ++ N + Y D G+S KH Sbjct: 37 KVCGYARVSTGSQAQATSYTAQVEYYTEKIESNPLWEF-AGVYADEGISGTNVKH--RDE 93 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F + E G I +L +S+ R +R V E I+ ++ + G+ + +N I Sbjct: 94 FQMMISDCEDGNI---DLILTKSITRFARNTV-ECIQTIRKLKEIGVGIYFEKEN----I 145 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 ++L+E L IL A A ESE SS + + +K+ QD GT + ++ D+ Sbjct: 146 NTLSEKSELFITIL-ASVAQGESENISSNNRWAIQKRFQD----GTYIISTPAYGYGKDE 200 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 V +T+ I++ + + IAK LN + G E W VI+ +L Sbjct: 201 DGN-LVIIESEAETVRWIYESYLNGMGVYVIAKALNQKGIPTIRGAE-KWQDGVIQDILK 258 Query: 243 NKALIGI-------------CVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFG 289 N G V + I +P +++ + AV+ + Sbjct: 259 NPIYEGDMLQQRTYTETRFPFVRRVNNGQRNQYLIKDSHPPIVTHEEAEAVRNLMAYRVD 318 Query: 290 ISNSSKN-PMLINLLRTVMKCEACGNTMIVHA---VSGSLHGYYVCPMR--RLHRCDRPS 343 + + +K+ L + C CG T + C RC + Sbjct: 319 VLHMNKSDYTKRYLFSGRIICGECGRTFRRQKIYIGKPYEKIIWTCSGHVEDKERCCLKA 378 Query: 344 IKRDLVDY--------------NIINELLFNCSKIQPVENKKDANETLELKIIELQMKIN 389 I+ D++ I+ LL +++ + L+ +I ++ + Sbjct: 379 IREDVLHRAFTDMWNKLYTNQGTILEPLLKELTELVAARQDSEEIRQLDKEIKDISGQSQ 438 Query: 390 NLIVALSVA-PEVTAIAEKIRLLDKELRRASVSL----KTLKSKGVNSFSDFYAIDLTSK 444 L + + E L +L + L+ ++ + + Sbjct: 439 ILNQVMRKGYMDSALFMESSSKLGWQLTECRRKKTLLTRKLRRTKEIVRTEQLIQLIAEQ 498 Query: 445 NG--RELCRTLAYKTFEKIIINTDNKTCDIYFMNG 477 +G E L T EKI+++ NG Sbjct: 499 DGLMEEFDEQLFKMTAEKIVVSK-EHDITFCLYNG 532 >UniRef50_UPI00016C43FD Resolvase, N-terminal domain n=2 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C43FD Length = 535 Score = 231 bits (589), Expect = 4e-59, Method: Composition-based stats. Identities = 84/517 (16%), Positives = 178/517 (34%), Gaps = 68/517 (13%) Query: 3 KAIAYMRFSSPGQMSGD--SLNRQRRLIAEWLKVN--SDYYLDTITYEDLGLSAFKGKHA 58 + Y R S+ + + SL+ QR +++ + L Y+D G + G + Sbjct: 22 RCAIYTRKSTEEGLEQEFNSLDAQREAGEAFVRSQAGEGWVLMPERYDDGG---YTGGNT 78 Query: 59 QSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNT 118 + + I+ G + ++V +DRLSR + A + ++ + +++ Sbjct: 79 DRPGLQKLMAHIDEGRV---DCVVVYKVDRLSRSLLDFA-QLMRTFEQQQVAFVSVTQ-- 132 Query: 119 VYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWL 178 ++ L+ +L+ A E EI S R + R+ +G Sbjct: 133 --QFNTATSMGRLVLNVLL-SFAQFEREIISERTRDKIAATRRKGKWAG----GHPVLGY 185 Query: 179 SLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHA--VKNFSGKESA----- 231 +D V +P + + IF L +E RSL +A L K ++ ++ Sbjct: 186 DIDPAGYKLVVNPAEAERVRAIFALYLEHRSLLPVADELATRGWTTKQWTTRKGPERGGK 245 Query: 232 -WGPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGI 290 + + + LL N IG G +P V+ +F+ VQE Sbjct: 246 RFDRTNLYNLLTNPLYIGKVRYKDEVH-------DGEHPAVVDPGVFHQVQEALRRNGRT 298 Query: 291 SNSSKNPMLINLLRTVMKCEACGNTMI-VHAVSG-SLHGYYVC---PMRRLHRCDRPSIK 345 + +L+ +++C CG M H+ G + YY C R C S+ Sbjct: 299 GGAHVRNQFGAVLKGLLRCAPCGAAMTPTHSTKGAKRYRYYACVAGQKRGARTCPSRSVP 358 Query: 346 RDLVDYNIINELLFNCSKIQPVEN---------------KKDANETLELKIIELQMKINN 390 + V+ +++++ + + + L+ + ++ N Sbjct: 359 AEPVETFVVDKIRAVGRDPELLRQVLDRARDAGAARAAELEAERAGLDKDLRGWHAEVRN 418 Query: 391 LIVALSVAPE-------VTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTS 443 L V L + + + E+I ++ + + +K + ++ V A+ Sbjct: 419 LSVPLRPGEDNGPLVARLADLHERIGTVEGRVTKVRDQIKAVAAQLVPEEQAARALAAFD 478 Query: 444 K-----NGRELCRTLAYKTFEKIIINTDNKTCDIYFM 475 E R +A + + + + + F Sbjct: 479 PVWDALTPLERARVIAL-LVQTVEYDGRDGRVTVSFH 514 >UniRef50_D1C6M6 Resolvase domain protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6M6_SPHTD Length = 524 Score = 231 bits (588), Expect = 6e-59, Method: Composition-based stats. Identities = 100/524 (19%), Positives = 192/524 (36%), Gaps = 59/524 (11%) Query: 2 KKAIAYMRFSSPGQ-MSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHA-Q 59 ++A Y R SS Q G SL+ Q ++ + Y Y + F G + Sbjct: 5 RRAAIYARVSSEQQERDGTSLDTQLAACRQYAAAHG--YEVVAEYRE----VFTGVNLWD 58 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 + +A+ ++ ++DRLSR+ V + L +HG V + + Sbjct: 59 RRELTALREAMRR---KEFDVVIAYAIDRLSRDPVHLGV-ILSEADHHGAAVEFVTEPLD 114 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 N P + + A E E + + + R+ E+G ++ P + Sbjct: 115 ------NSPEGQLIRFVRGYAAKVEHE----KFRERAMRGRRARAETGKLIHGPRPLYGY 164 Query: 180 --LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVI 237 D +T V +P+ ++ IF+ E R L AIA+ L D + +GK + W + + Sbjct: 165 QWADADKTRLVVNPETAPIVQRIFREAAEGRPLRAIARGLTDDGIPTPTGKPT-WSMTTV 223 Query: 238 EKLLANKALIGICV-PSYRARGKGISE-------IAGYYPRVISDDLFYAVQEI-RLAPF 288 K+L + G ++++R + G P ++ F VQE Sbjct: 224 SKILKHPHYTGDARAWTWQSRNGYVRNHEAGLPLPEGTVPPLVDRATFELVQEQFARNQA 283 Query: 289 GISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMR--RLHRCDRPSIKR 346 + +++NP L ++C CG M VH SG Y C R R C P I Sbjct: 284 RAARNNRNPEAALLRGGYVRCGYCGRAMHVHKNSGKPA--YRCNGREYRRGSCPMPVIAA 341 Query: 347 DLVDYNI---INELL-------FNCSKIQPVENKKDANETLELKIIELQMKINNLIVALS 396 ++D + + +L +++Q + ++ + ++ + NL A+ Sbjct: 342 HVLDAAVWERVEAILTRPEIVAEELARLQTDDPTAADLAAVDRLLQQVDRQRANLTQAIG 401 Query: 397 VAPEVTAIAEKIRLLD---KELRRASVSLK-TLKSKGVNSFSDFYAIDLTSKNGRELCRT 452 + + A+A + L+ R+ + L + + DL S R R Sbjct: 402 LTDDPDAVAALMAELERVAARRRQLEAEREGILHRREAWEAARANLADLMSWCERVAERL 461 Query: 453 LAYKT-FEKIIINTDNKTCDIYFMNGIVFKHY------PLMKVI 489 ++ ++ + +Y + + Y PL +V+ Sbjct: 462 GELTYEQRRLALDALGISVQVYRASDPDYPRYVITAKLPLDEVV 505 >UniRef50_A9BFJ9 Resolvase domain n=14 Tax=Bacteria RepID=A9BFJ9_PETMO Length = 522 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 92/506 (18%), Positives = 186/506 (36%), Gaps = 55/506 (10%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 + AY R S+ + S Q ++K N ++ L I + D G++ K + Sbjct: 28 RVAAYCRVSTDSEEQATSYEAQIEHYTNYIKSNPEWELAGI-FADEGITGTNTK--KREE 84 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F+ ++ G I ++ +S+ R +R + + ++ ++ + I V +N I Sbjct: 85 FNRMIEECMQGKI---DMIITKSISRFARNTL-DCLKYIRQLKEKNIPVYFEKEN----I 136 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 ++L+ ++ I+ A A +ES+ S VKL + + Q G I D Sbjct: 137 NTLDSKGEILLTIM-ASLAQQESQSLSQNVKLGIQYRYQQ----GKIHINHNRFLGYTKD 191 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 K V P+ + ++ I++ +E S+ IA+ L + +G W S I K+L Sbjct: 192 KDGNLVIVPEEAEIVKRIYREYLEGSSMLQIARGLEADGILTGAG-NPRWHTSTINKILR 250 Query: 243 NKALIG----------ICVPSYRARGKGISE---IAGYYPRVISDDLFYAVQEIRLAPF- 288 N+ IG + R GI + + +I ++F VQE + Sbjct: 251 NEKYIGDALLQKTYTVDFLSKKRVANNGIVPQYYVENSHEPIIPREIFMQVQEQLVKRRC 310 Query: 289 ---GISNSSKNPMLINLLRTVMKCEACGNTMIVH--AVSGSLHGYYVCPMRRLHR---CD 340 + +N + L ++ C C G + C R + C Sbjct: 311 VHISKNGKKRNYSNNHPLSQMVFCGKCHEIFRRVHWNNRGKKSIVWRCVSRLENTGLFCT 370 Query: 341 RPSIKRDLVDYNIIN-------------ELLFNCSKIQPVENKKDANETLELKIIELQMK 387 +I D + I++ +L + E+ ++ ++ ++ ELQ + Sbjct: 371 ASTILEDTLKEKIVDAINVAVSGKNSFLAILKKNIETVLSEDLDESTADIDKRLEELQTE 430 Query: 388 INNLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGR 447 + + + ++R L +E + L+ K + +DF +++ + Sbjct: 431 LIQKANSKEAYDNIVNEIYRLRDLRQETLSRNA-LRQDKRDRIAEMTDF--LNMQTGGIT 487 Query: 448 ELCRTLAYKTFEKIIINTDNKTCDIY 473 E L K EK + D + Sbjct: 488 EFDDKLVRKLIEKATVYNDRLVVEFK 513 >UniRef50_D2LV95 Resolvase domain protein n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LV95_BACS4 Length = 525 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 92/525 (17%), Positives = 182/525 (34%), Gaps = 73/525 (13%) Query: 3 KAIAYMRFSSPGQMS-GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 KA Y+R S+ Q G SL+ Q + E+ K Y Y D G + GK+ Sbjct: 7 KAALYIRVSTEEQKKHGYSLSGQAEELKEYAKQKG--YEVFDVYSDGG---YSGKNFNRP 61 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 + + ++V +DR+SR + + ++ + Sbjct: 62 EVQRMFRDMSN---NKFDVIIVWKVDRISRSNKDVLSLIDDELKPRNMKLLV----KTCD 114 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 IDS + ++L A E + RV +K +D +G + L D Sbjct: 115 IDSSTTNGYMFISLL-GTFAEYERAVIIERVTAGMEKVARDGEWNGGKV-------LGYD 166 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 + V + + K ++ I+ +R E IA LN K K++++ I+ +L Sbjct: 167 SEDKQLVINEEESKIVKEIYNMRAEGLGYKKIADNLNSKGKKTK--KDNSFSIPAIKLIL 224 Query: 242 ANKALIGICVPSYR---------ARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISN 292 N+ IG V + ++ + +I +L+ VQEI+ + Sbjct: 225 ENEVYIGTKVWGKYRNWEEKRRGGKNNSPIKVENKHDAIIDIELWNRVQEIKRINNNTYS 284 Query: 293 SSKNPMLINLLRTVMKCEACGNTMIVHAVSGS----LHGYYVCPMRRLHR---CDRPSIK 345 +++N L ++KC CG ++ H YY+C C IK Sbjct: 285 TNRNFNGNLFLTGLLKCPVCGAGTVMSKTKKRNGNGYHIYYMCQNYHSKGKTVCKPNLIK 344 Query: 346 RDLVDYNIINEL---------------LFNCSKIQPVENKKDANETLELKIIELQMKINN 390 +++V+ ++ + K V + L+ +I + + + N Sbjct: 345 KEIVENKVLEAIKEVICDPDLINEVITKLELEKKSGVADLTSNLALLKREIKKYKEEQLN 404 Query: 391 LIVALSVAPEV-------TAIAEKIRLLDKELRRASVSLKT-------LKSKGVNSFSDF 436 L L ++ I +++ L++ + ++ K +++ +F Sbjct: 405 LDKQLLCGLKIEHYNRVSDQIQDRLNELNQSIENIERQIERNNLNNFITKEIIIDTLKNF 464 Query: 437 YAIDLTSKNGRELCRTLAYKTFEKIIINTDNKT---CDIYFMNGI 478 +L K E + L + + + D K +F G Sbjct: 465 D--NLFEKANGEEKKLLIRSLIKNVEMEKDRKEIKHIAFWFAEGN 507 >UniRef50_B5QBH4 Resolvase domain protein n=1 Tax=Salmonella enterica subsp. enterica serovar Virchow str. SL491 RepID=B5QBH4_SALVI Length = 624 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 117/585 (20%), Positives = 203/585 (34%), Gaps = 115/585 (19%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 M K Y R SS Q+SG L+RQ + E++ N + + D G+S + G + + Sbjct: 1 MIKTFIYSRVSSQEQLSGGGLDRQETDVREYVTRNGLDQYEIVAMVDRGISGYDGSNMRD 60 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNH-GIDVITLCDNTV 119 G ++ G G+ L++E++DR SR A+E +++N GI V + NT Sbjct: 61 GELGKWYKDAITGMY-WGSHLVLEAIDRFSRRDPMLAMEDFTVLVNKGGIKVHIVKFNTF 119 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 N D +L ++ A+ ES+ KS R+ W+++R+ AL++GT +TA P W+ Sbjct: 120 INGD------NLPMLSMMMNLAHSESKQKSDRISKGWQRRRRMALDNGTAITARTPYWID 173 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLND-------------------- 219 + D + + F + + S IAK LN+ Sbjct: 174 VRDNEYRLN---NSSIAVVEAFAMYKQGLSCGLIAKKLNELKHYFPYMWTKTAVQHIVDG 230 Query: 220 ----------HAVKNFSGKESA--------------------WGPSVIEKLLANKALIGI 249 A+K + W + KLL NK++ G+ Sbjct: 231 LNTSGIIDAPRAIKTIKAFYKSGFSVEDIAKKMNAEFQFMKEWNAPAVHKLLQNKSVTGL 290 Query: 250 CVPSY----------------RARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGIS-- 291 R + +G YP++IS D F +Q++ + + Sbjct: 291 VEIQKRKLIQEFDSDGKPLELRTKSEGEKYFESIYPQIISIDDFELIQKLLESNRKVDTK 350 Query: 292 -------------NSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSL-------HGYYVC 331 N + +L ++ +C CG M + V + Y C Sbjct: 351 TGKGQTTGGTVTQNEDGELVKQFILSSLCRCYKCGGAMFNNIVRSKRKNGKVDTYSYLRC 410 Query: 332 PMRRLHRCDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLELKIIELQMKINNL 391 R CD ++ +++ II + E L+ + +EL I Sbjct: 411 LNERDAHCDVKALNYPVIERAIIEHVKGLNFDTMFKGTNNSELELLKTREVELLRDIATY 470 Query: 392 IVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKG---------VNSFSDFYA--ID 440 A++ A +L L A L+ L+ K + D Sbjct: 471 EDAIAARK--AAGKNTSPVLVTSLVDAQDDLEALQKKIRAISGVTVNAEELTSLNESVFD 528 Query: 441 LTSKNGRELCRTLAYKTFEKIIINTDNKT---CDIYFMNGIVFKH 482 + R + K ++I N K I + G V +H Sbjct: 529 VAEYELRNMVELELQKIIKRITFNCTEKNIYFITIQYNTGTVLQH 573 >UniRef50_B0SYD9 Resolvase domain n=2 Tax=Alphaproteobacteria RepID=B0SYD9_CAUSK Length = 579 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 82/454 (18%), Positives = 163/454 (35%), Gaps = 59/454 (12%) Query: 3 KAIAYMRFSSPGQMSGD-SLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 +A Y+R S+ Q D SL QRR + + + Y + G +A K Sbjct: 15 RAAVYLRVSTGRQAEHDLSLPDQRRQLDAYCAGKG--WKVATEYLEPGNTATDDK---RP 69 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 AF + ++A P +LV S R R++ ++ + +G+ V+++ Sbjct: 70 AFQDMIEAAMT-KPAPFDVILVHSFSRFFRDQFQFEFY-VRKLAKNGVKVVSITQELG-- 125 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL- 180 ++P S + ++ +S+ + K+ + +G + P + Sbjct: 126 ----DDPMSHMMRKIMTLFDEYQSKENGKHTLRAMKENARQGFWNG----SRPPLGYRVI 177 Query: 181 ------DDKRTAFVPDPDRVKTIELIFKLRMER------RSLNAIAKYLNDHAVKNFSGK 228 + DP + + + I+KL + L +IA YLND+ V+ G Sbjct: 178 IAEQRGAKLKKKLEIDPIQAEKVRRIYKLALFGVDGSGPLGLKSIATYLNDNNVRTKDG- 236 Query: 229 ESAWGPSVIEKLLANKALIGICVPSYRARGKGISEIAGYY-----PRVISDDLFYAVQEI 283 +G + K+L G ++ + + P ++++D + AVQ+ Sbjct: 237 -GRFGIDAVHKVLTRTTYKGEHRFNFTDHKNRARKPDEEHAVAKIPAIVTEDEWQAVQDH 295 Query: 284 RLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRR---LHRCD 340 +S+ LL + C CG M + + YY C + C Sbjct: 296 LKLRSPTCMASRFVTSQVLLGGICFCGLCGGAMTLRTGKNGRYRYYTCSTKARMGKSGCT 355 Query: 341 RPSIKRDLVDYNIINEL---LFNCSKIQP------------VENKKDANETLELKIIELQ 385 ++ D +D ++N L L ++ VE ++ L + E Sbjct: 356 GITVPMDKLDDAVVNHLERRLLQPDRLCMLMGNVLDRRHEWVERRRSHVAELRKRSTEAA 415 Query: 386 MKINNLIVALS---VAPEVTAIAEKIRLLDKELR 416 K+ L A+ V ++++IR L+ + Sbjct: 416 NKLVRLYAAIEDGLVGHGSEGLSDRIRELEAIKK 449 >UniRef50_Q7U778 Possible site-specific recombinase n=1 Tax=Synechococcus sp. WH 8102 RepID=Q7U778_SYNPX Length = 632 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 104/504 (20%), Positives = 187/504 (37%), Gaps = 59/504 (11%) Query: 5 IAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFS 64 +Y R S+ Q+ G L RQ + + + + D GLSAF G H GA Sbjct: 28 FSYERVSTKSQVDGVGLKRQHDAFEPFCQRHG-LIPNADPIRDEGLSAFHGTHKSKGALG 86 Query: 65 EFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDS 124 F+ A I G+ L+VE DR SR + L + + + + + +++ + Sbjct: 87 AFIQARRDDLIPAGSVLVVEEWDRFSRRTTSVSERMLHELWDLDLALGIVSQDSIVTEEL 146 Query: 125 LNEPYSL-IKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIM--TASCPRWLSLD 181 NE L + ++ +N ES KS R+K W+++R L SG + P+WL++ Sbjct: 147 YNENIGLSVMLKVLQNESNAESSKKSRRIKNVWQERRDSYLNSGKKFLSLSDAPKWLAIG 206 Query: 182 DKRTAFVPDPDRVKTIELIFKLRM-ERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 + FVP P +TI+LIF+L + S IA+ LN + +G WG + + K+ Sbjct: 207 E--NDFVPAPL-AETIQLIFELAAKQGLSSVQIAEELNRRGLSTATG--GTWGNANVCKV 261 Query: 241 LANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPML- 299 L N ++G ++ G GI GYYP ++ +E + + Sbjct: 262 LRNDQVMG-----HKCWGDGIIS-QGYYPVIVDAKTVELARENVKRRYSAPARGRTTRKN 315 Query: 300 ------INLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHR-CDRPSIKRDLVDYN 352 N+ + + C CG M+ + + VC + R C S +R VD Sbjct: 316 GELGPCRNIFKGLTYC-CCGAPMVDTSSHSGKYLDLVCSAQNDGRDCIVKSKQRWKVDEE 374 Query: 353 IINELLFNCSKIQPVEN-------KKDANETLELKIIELQMKINNLIV------------ 393 ++ + + +N + + LE + + +++ Sbjct: 375 LLLRAFMDRRWERFFKNPGTGPRIRDLQDRLLEQERLAGELRTQAKAAEDNASKAFTQTN 434 Query: 394 ------------ALSVAPEVTAIAEKIRLLDKELRRASV--SLKTLKSKGVNSFSDFYAI 439 A+ + A +K + EL +K + +F ++ Sbjct: 435 ADKDLLVFYGELAIKAKKQANAAEDKTKQTRAELEAFQALPDGADMKEQIRIKLEEFLSL 494 Query: 440 -DLTSKNGRELCRTLAYKTFEKII 462 + R +II Sbjct: 495 PNRADPEVRNKFNQWVQTLGARII 518 >UniRef50_B0TCI3 DNA recombinase, putative n=22 Tax=Bacteria RepID=B0TCI3_HELMI Length = 524 Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 93/511 (18%), Positives = 190/511 (37%), Gaps = 57/511 (11%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 + AY R S+ + S Q +++ N ++ L I + D G++ K + Sbjct: 29 RVAAYCRVSTDNEEQASSYEVQIEHYTRYIQSNPEWELAGI-FADEGITGTNTK--KRAE 85 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F+ ++ G I ++ +S+ R +R + + ++ ++ + + GI V +N I Sbjct: 86 FNRMIEECMAGRI---DMVITKSISRFARNTL-DCLKYIRQLKDKGIPVFFEKEN----I 137 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 ++++ ++ I+ A A +ES+ S V++ + ++G I D Sbjct: 138 NTMDSKGEILLTIM-ASLAQQESQSLSQNVRMGIAFR----FQNGEIQVNHNRFLGYTKD 192 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 + V P+ + ++ I++ +E SL I + L + +GK W P I K+L Sbjct: 193 ENKRLVIVPEEAEIVKRIYREFLEGASLLQIGRGLEADGILTAAGKP-KWRPETIRKILK 251 Query: 243 NKALIG----------ICVPSYRARGKGISE---IAGYYPRVISDDLFYAVQEIRLAPFG 289 N+ IG + R GI + + +I +LF VQE Sbjct: 252 NEKYIGDALLQKTYTVDFLSKKRVINNGIVPQYYVENSHEPIIPRELFLQVQEELARRAN 311 Query: 290 ISNSSKNPMLI----NLLRTVMKCEACGNTMIVH--AVSGSLHGYYVCPMR---RLHRCD 340 + + K + L +++ C CG G + C R + C Sbjct: 312 LRSGEKGGKRVYSSKYALSSIVFCGECGEIYRRVHWNNRGKKSIVWRCVSRLEEKGSDCG 371 Query: 341 RPSIKRDLVDYNIIN-------------ELLFNCSKIQPVENKKDANETLELKIIELQMK 387 P++ + + ++ E L + ++ E ++ K+ ELQ + Sbjct: 372 SPTVSEEDLQKAVLKAINSIIAGRDEFIETLRRNIETALGGEFDESTEAIDKKLEELQHE 431 Query: 388 INNLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGR 447 + L + V ++R L +E ++ + K + + DF ++ S Sbjct: 432 LLRLASTKAAYDSVANEIYRLRELRQETLASNSE-RQNKRQRIAEMMDF--LESQSGVIF 488 Query: 448 ELCRTLAYKTFEKIIINTDNKTCDIYFMNGI 478 E L EK+ + + F GI Sbjct: 489 EYDEKLVRWLVEKVTVF--EGGIVVKFKTGI 517 >UniRef50_B8R885 Gp20 n=2 Tax=Bacillus phage TP21-L RepID=B8R885_9CAUD Length = 460 Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 94/472 (19%), Positives = 177/472 (37%), Gaps = 39/472 (8%) Query: 3 KAIAYMRFSSPGQMS-GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 K Y R S+ Q G SL Q + + + + Y D G + GK+ Sbjct: 2 KCAIYRRVSTDEQAEKGFSLENQLLRLQAFAESQG--WEVVHDYMDDG---YSGKNMNRP 56 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 L ++ +LV LDR +R V + + L++ H +D + + + Sbjct: 57 QIKRMLHDLKS---NKFDIVLVYRLDRFTRS-VKDLNDLLEVFKEHEVDFKSATE----S 108 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 ID+ +I ++++ A E E S RVK +KK+ G I T P +++ Sbjct: 109 IDTATATGRMILNMMVST-AQWERETISERVKDVVRKKKDL----GLISTGYPPYGYAMN 163 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 D P V+ ++ +F+ + + I+K LN+ + +G + W S ++ Sbjct: 164 DG--VISQVPHEVEIVKFVFE-KAKVYGFQKISKLLNEQGLVTRNG--TKWLISTASRIA 218 Query: 242 ANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLIN 301 N G + Y VI+ + V + +K + Sbjct: 219 HNPFYSGEMRYKRDGETSTVPINVEGYEPVITKEEHKEVLKAIKKRNRNQTRAK-SNEVY 277 Query: 302 LLRTVMKCEACGNTMIVHAVS--GSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINELLF 359 ++ C CG+ M VS G + YY C H C+ I+ + +D E + Sbjct: 278 PFSGIVLCPECGHPMKGTRVSSRGYYYKYYRCDRASDHFCNGKLIRYEKLDKA-FAEYIH 336 Query: 360 NCSKIQPVENKKDAN-ETLELKIIELQMKINNLIVALSVAP--------EVTAIAEKIRL 410 + +I +E K++ N + ++ +I + KI L +V + EKI Sbjct: 337 DAFQIDRIEIKEETNTKDIQREIKRCKSKIERLKDLYVDGDISKKKYKNDVGELNEKIYD 396 Query: 411 LDKELRRASVSLKTLK-SKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKI 461 L+++L A + + + S+F+ + + E R + +I Sbjct: 397 LEQKLLSAENKISHDHIRENLKRLSEFWGL-IDDNTKMESIRGVFDTITVEI 447 >UniRef50_Q72WY0 DNA recombinase, putative n=7 Tax=Bacillus cereus group RepID=Q72WY0_BACC1 Length = 522 Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 98/512 (19%), Positives = 194/512 (37%), Gaps = 65/512 (12%) Query: 2 KKAIAYMRFSSPGQM-SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 +K Y+R S+ Q G SL Q + ++ N+ Y Y D G + GK Sbjct: 6 RKVAIYIRVSTEEQANEGFSLGAQEDYLKQYA--NTKGYEVYDIYIDDG---YSGKDYNR 60 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 + Y T +LV+S+DR+SR +V + + + +L + + DN Sbjct: 61 PEIQRLFKDL---YQEKFTGILVKSVDRISR-RVSDVTKLIDDVLAPRKCYVLVSDN--- 113 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 N+DS + L+A A E + RVK K+ + +G + L Sbjct: 114 NLDSSTTGGTAFI-QLLATFAEYERSMIVQRVKAGMSKRAELGYWNGGHV-------LGY 165 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 D K + + + + IF LR E + +IA LN K G+ + I+ + Sbjct: 166 DVKNKELKVNKEEAEVVRKIFHLRTEGKGYKSIALILNQQGFKTKRGR--LFSIGTIKTI 223 Query: 241 LANKALIGICVPSYRA-----RGKGISE----IAGYYPRVISDDLFYAVQEIRLAPFGIS 291 L N IG C R KG ++ + G + ++S+DL+ VQ + A Sbjct: 224 LENPLYIGYCRWGRHKNWNVERRKGKTDEYKFVKGKHEPIVSEDLWKRVQGVNYAHKKSI 283 Query: 292 NSSKNPMLINLLRTVMKCEACGNTMIVHAVSGS----LHGYYVCPMRRLHR---CDRPSI 344 + ++N +L +++C +CG M++ H YY+C C I Sbjct: 284 SKNRNFNGEFVLSGILRCPSCGAGMVMCKTKKRDKSGYHLYYMCQAFHSKGKLACKSNLI 343 Query: 345 KRDLVDYNIIN--------ELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVAL- 395 +++ ++ ++ L+ + + + E K+ E ++ ++ + ++ + Sbjct: 344 RKEDIEEKVLQCINQIILIPLIVDKTFERIQEKKERGIERIKNDLLYINEELKRKKQFIK 403 Query: 396 -------------SVAPEVTA-IAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDL 441 E++ + E+I L+ E + +++++ + Sbjct: 404 KLNKDYFDEKIRVETYTELSEPLREEIDELESEKGKLDRKIESVEIPITKEMVIKTLENF 463 Query: 442 TSKNGR---ELCRTLAYKTFEKIIINTDNKTC 470 T+ E ++L +KI + + K Sbjct: 464 TNLYENATYEQKKSLLRAIIKKIEVQPNRKEI 495 >UniRef50_Q3DFF9 Site-specific recombinase, resolvase family, putative n=5 Tax=Bacteria RepID=Q3DFF9_STRAG Length = 448 Score = 228 bits (580), Expect = 6e-58, Method: Composition-based stats. Identities = 83/379 (21%), Positives = 151/379 (39%), Gaps = 41/379 (10%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 + AY R S+ S Q +++ + DY L I Y D G+SA K + A Sbjct: 14 RVAAYCRVSTDQDEQLSSYENQVSYYRDYILKHEDYELVDI-YADEGISATNTK--KREA 70 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F+ + G + +LV+S+ R +R + + I+ ++ + GI V +N I Sbjct: 71 FNRLIQDCRAGKV---DRILVKSISRFARNTL-DCIKYVRELKELGIGVTFEKEN----I 122 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 DSL+ ++ IL + A +ES S +KK E G + + D Sbjct: 123 DSLDSKGEVLLTIL-SSLAQDESRSISENATWGIRKK----FERGEVRVNTTKFMGYDKD 177 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 + V +P++ + ++ I++ ++ S +IAK LN + +K +SGK + W PS I K+L Sbjct: 178 ENGKLVINPEQAEVVKHIYQQFLKGYSPESIAKELNTNGIKGWSGKAN-WYPSSILKMLQ 236 Query: 243 NKALIGICVPSY--------RARGKGISEIAGY-----YPRVISDDLFYAVQEIRLAPFG 289 N+ G + + R + ++ Y + +I +++ VQE Sbjct: 237 NEKYKGDALLQKTYTVDFLTKKRTENDGQVNQYYVTNNHEAIIDTEMWDTVQEELAXRKD 296 Query: 290 ISNSSKNPMLI-----NLLRTVMKCEACGNTMIVHA--VSGSLHGYYVCPMRRLHR---- 338 K I N T + C CG+ S + C R + Sbjct: 297 FREKHKLKTYIMQSDDNPFTTKVFCAECGSAFGRKNWTTSRGKRKVWQCNNRYKVKGQIG 356 Query: 339 CDRPSIKRDLVDYNIINEL 357 C I ++++ + + Sbjct: 357 CQNNHIDEEMLEKAFMKAV 375 >UniRef50_A3VUU7 Putative uncharacterized protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VUU7_9PROT Length = 528 Score = 227 bits (579), Expect = 6e-58, Method: Composition-based stats. Identities = 98/474 (20%), Positives = 182/474 (38%), Gaps = 80/474 (16%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 KA Y R+SS Q S S+ Q L + L+ S + +T+ Y D +S G Sbjct: 4 KAAIYARYSSDLQ-SIRSIEDQIALCRQHLEQKS--WTETVVYSDRAISG--GAMVTRPG 58 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 E + +G ++ E+LDR+SR++ A K++ HG+ ++TL + V Sbjct: 59 IQELIRGAANGQF---NVVVAEALDRISRDQADTAT-IYKILAFHGVSIVTLSEGEV--- 111 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRW-LSLD 181 + + K ++ + + ++ + + SG C + + Sbjct: 112 ---DSMHVGFKGVMNEMFLRD--------LAKKTRRGQTGVVNSGRSAGGHCYGYDIVPG 160 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVI---- 237 ++ + D +T+ I +L +E S +IA LN V G + W S I Sbjct: 161 EQNGILTINEDEAETVRRIMRLFVEGTSPRSIAAMLNKEGVAAPRGSD--WRASTINGQV 218 Query: 238 ---EKLLANKALIGICVPSYRARGKG-----------------ISEIAGYYPRVISDDLF 277 +L N+ IG + + R + I+E+ R++ D+L+ Sbjct: 219 HAGNGILNNELYIGRRIWNRRHKVTDPFSGKKRMRANPESEWVINEVPDL--RIVDDELW 276 Query: 278 YAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRR-L 336 AV+ + +K P LL +++C CG M + + + Y C RR Sbjct: 277 QAVKLRQQKHSRKRGGAKRPTR--LLSGLLECSVCGGPMSIVSQNR-----YGCSTRREK 329 Query: 337 HRC-DRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANE-----------------TLE 378 C + +I ++ ++ L N + + P K A E LE Sbjct: 330 GTCSNNRTIAAKELEERVLAGL--NKALLHPDAQKAAAREFHAELVRQQRATGSERFQLE 387 Query: 379 LKIIELQMKINNLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNS 432 I E +I+ ++ A++ TA+ +K+ L+ E L + S+ + S Sbjct: 388 KAIAEADRRIDRIVDAIAEGVATTALKQKLVALETEKVENEAKLAAMGSEPIVS 441 >UniRef50_D2BGC7 Resolvase domain protein, PinR type n=2 Tax=Dehalococcoides RepID=D2BGC7_DEHSV Length = 563 Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats. Identities = 87/506 (17%), Positives = 173/506 (34%), Gaps = 52/506 (10%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 KK Y R SS Q S+ Q + + E+ N Y Y+D A G+ Sbjct: 27 KKVAIYARVSSERQDIDLSITAQLKALREYASRNGYY--VVKEYKDE---AESGRSIDRP 81 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F E + +LV L R +R + I + L+ HG+ VI++ + Sbjct: 82 GFKEMVVTARQ-KPPQFGAILVWKLSRFARNREDSIIYK-SLLRRHGVQVISINEPVE-- 137 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 + P + +I S S V ++ G R D Sbjct: 138 ----DTPSGRLLEGIIEVIDEFYSANLSQDVTRGMRESASRGFYPGGPPPYGYRRVKVQD 193 Query: 182 D--KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEK 239 +R PDP+ ++ IF+ + + + I + LN + K W + + Sbjct: 194 GGIQRVKLEPDPETAPVVDRIFQECVADKGMIEICRGLNGDGLTTR--KNKRWSKTSVAT 251 Query: 240 LLANKALIGICVP-----SYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSS 294 +L N+ +G + ++ + + + ++ + F Q Sbjct: 252 VLKNEVYLGTLIWGEVSTNHNPNRLPVIRVENAWTPIMDPETFKKAQLKLAERAPKITHP 311 Query: 295 KNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHR---CDRPSIKRDLVDY 351 + +L +++C+ C ++ HAV YY+C R C P + ++ ++ Sbjct: 312 RVVHSEYILSGLVRCKNCDAALVGHAVKSGKFFYYMCGNARKRGRGLCPTPLLPKERIEN 371 Query: 352 NIINEL---------------LFNCSKIQPVENKKDANETLELKIIELQMKINNLIVAL- 395 +I+ + L N Q + + E + ++ +++ ++ L AL Sbjct: 372 FMIDRIKRYILTDENLTELIKLTNEELAQQCQIESGRLEAINSELEDVEGRLVKLYNALE 431 Query: 396 -------SVAPEVTAIAEKIRLLDKELRRASVSL--KTLKSKGVNSFSDFYAIDLTSKNG 446 +AP + A+ EK L++ A +L KT++ D+ + Sbjct: 432 TGEFKGGELAPRIKALFEKKTELEQAKCGAEDTLKYKTIEMPNPGVIKDYVQDLRNTIEE 491 Query: 447 REL--CRTLAYKTFEKIIINTDNKTC 470 +T E+I ++ Sbjct: 492 SNFISKKTFLRSFIERIEVDEKEVKV 517 >UniRef50_A7GVM1 Resolvase domain n=1 Tax=Bacillus cytotoxicus NVH 391-98 RepID=A7GVM1_BACCN Length = 521 Score = 227 bits (578), Expect = 9e-58, Method: Composition-based stats. Identities = 83/463 (17%), Positives = 166/463 (35%), Gaps = 63/463 (13%) Query: 1 MK-KAIAYMRFSSPGQMS-GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFK--GK 56 MK K Y+R S+ Q + G S++ Q + +++ ++ Y D G+S G+ Sbjct: 1 MKTKVALYVRVSTEEQANNGYSIDAQLNTLRNHCEISGKTIVE--EYADKGISGTSISGR 58 Query: 57 HAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCD 116 H + L+ + G ++V + RL+R + + ++ ++ + + + + + Sbjct: 59 H----GLQKMLEDAKKGLFSE---VIVWKISRLARNTI-DILKIVEELNKNNVVFRSFSE 110 Query: 117 NTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPR 176 N P ++ A E VKL ++ ++ +G M Sbjct: 111 NFETET-----PMGKFALQMMGAVAELERNTIVDNVKLGMTQRAKEGKWNGGSM------ 159 Query: 177 WLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSV 236 L + K + IF L + + AIA LN K K ++ + Sbjct: 160 -LGYTCIDKELKIVEEEAKIVRYIFDLYINGKGYKAIANKLNHEGYKTKRKK--SFSINS 216 Query: 237 IEKLLANKALIGICVPSY-----RARGKGISE----IAGYYPRVISDDLFYAVQEIRLAP 287 I ++AN A G + + R KG SE + G + +IS D++ + I + Sbjct: 217 IRTIIANPAYAGFIRFNQVENWSKKRRKGKSENTTTVKGTHEPIISLDVWETSRII--SN 274 Query: 288 FGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHG-----YYVCPMRRLHR---C 339 +K L T+++C CG MI H + + +G YY C C Sbjct: 275 QKSHKPAKTFSGTFPLTTLLRCPMCGQGMIGHKIKKNKNGTEYIRYYQCGNFHYKGSAVC 334 Query: 340 DRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANET---------------LELKIIEL 384 I D+ + + ++ SK ++ D + + + Sbjct: 335 KSNLINADIAEEYVFKKIEEITSKPTILQEIVDRVNRDIKTLKEPIQNNLNYISKALADN 394 Query: 385 QMKINNLIVALSVAPEVTAIA-EKIRLLDKELRRASVSLKTLK 426 Q I + + + + ++I L+ + K+L+ Sbjct: 395 QKSIQKFMNIIETEDTLPQLILKRIHELEAKREELLEQKKSLE 437 >UniRef50_A7B0Q2 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A7B0Q2_RUMGN Length = 552 Score = 227 bits (578), Expect = 9e-58, Method: Composition-based stats. Identities = 95/506 (18%), Positives = 175/506 (34%), Gaps = 70/506 (13%) Query: 1 MKKAIAYMRFSSPG-------QMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAF 53 M A Y+R S + DS++ QR L +++ D L I Y D G + Sbjct: 6 MYHAAIYLRLSRDDEDIDGSAKRESDSISSQRELARSFVREQPDMELFDI-YIDDG---Y 61 Query: 54 KGKHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVIT 113 G + F + IE+G + ++V+ L R R+ + K + I Sbjct: 62 SGANFDRPDFKRMMADIENGNV---NCVVVKDLSRFGRDYIEAGRFIQKTFPAFSVRFIA 118 Query: 114 LCDNTVYNIDSLNEPYSLIKAILIAQRANEESEI--KSSRVKLSWKKKRQDALESGTIMT 171 + D+ DSL S ++ + +S S +VK + KR+ G + Sbjct: 119 ITDH----YDSLTADQSTTSLVIPVKNFVNDSYCQDISEKVKSHQRVKREK----GKFIG 170 Query: 172 ASCPRWLSLD-DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNF----- 225 A D + + V D K ++ IF +++ S AIA LN++ + + Sbjct: 171 AFAVYGYQKDHEDKNKLVIDEYAAKIVKNIFTWKLDGMSNLAIANRLNENGIFSPLEYKK 230 Query: 226 -----------SGKESAWGPSVIEKLLANKALIGICVPSYRARGKGIS------------ 262 +G S W ++++L N+ G+ V R + Sbjct: 231 SYGEHYSTGFQAGIVSKWSAVAVKRILTNEIYTGMMVQGKREKVNYKVDKILEKPESEWF 290 Query: 263 EIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMI--VHA 320 ++ G + +IS + + VQ + + + K ++ ++ C C M+ ++ Sbjct: 291 KVEGTHEAIISKEDYQNVQRLLKVD---TRAGKGKEKAHMFSGLLFCGDCKEPMVRRINR 347 Query: 321 VSGSLHGYYVCPMR-RLHRCDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLEL 379 G+ YY+C R R C R SI + + + + + V + +T E+ Sbjct: 348 YKGTEKIYYICSTRNRSEGCSRHSIPETDLKRVVFQIIRSQVTLLMDVNRQMQYLQTKEM 407 Query: 380 KIIELQMKINNLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAI 439 N + E+T + + ELR F +F I Sbjct: 408 ----------NFEDVVGFDKEITRLRNEQEKYL-ELRAGLYEDLKTGIITQTDFKNFSKI 456 Query: 440 DLTSKNGRELCRTLAYKTFEKIIINT 465 E T +K+ N Sbjct: 457 YEKQYIETEKALTRQEDMLKKLFYNG 482 >UniRef50_C0VZG2 Site-specific recombinase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VZG2_9ACTO Length = 515 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 88/515 (17%), Positives = 177/515 (34%), Gaps = 62/515 (12%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 ++ Y R S+ + +S Q +++ +D+ + + Y D G+S Q Sbjct: 25 RRVAGYARVSTNDEDQANSYQAQIDYYTQYINGRTDWEMVDV-YTDEGISGTSTARCQ-- 81 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F + G I ++ +S+ R +R V +++ ++ + + G++V +N Sbjct: 82 GFQRMIADALTGKI---DLIVTKSVSRFARNTV-DSLTTVRALKDKGVEVYFEKEN---- 133 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 I +L+ L+ I+ + A EES S V KR+ + + S Sbjct: 134 IWTLDSKGELLITIM-SSLAQEESRSISENVTWG---KRKAFKDGKVHLPFSSVIGFCKG 189 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 DP +E I++ +E S IAK L + G W S + +L Sbjct: 190 AD-GGIAIDPQTAPIVERIYREFIEGASPLQIAKGLTADGIPTPRG-AKKWQTSTVRSIL 247 Query: 242 ANKALIGICVPSYR----------ARGKGISE---IAGYYPRVISDDLFYAVQEIRLAPF 288 +N+ G + + + +G + G +P +I +++ A Q + Sbjct: 248 SNEKYKGDALLQKKFTADFLTKKLVKNEGQVPQYYVEGNHPAIIDPEVWEAAQHVAATTA 307 Query: 289 GISNSSKNPMLINLLRTVMKCEACG---NTMIVHAVSGSLHGYYVCPMRR--LHRCDRPS 343 + ++ CE CG H+ S + C R H P+ Sbjct: 308 ITGRHDRT------FSRMVFCEHCGGLYGAKTWHSTSKYKRVVWKCNDRYEVAHPGKTPT 361 Query: 344 IKRDLVDYNIINELLFNCSKIQPVENKKDAN-----ETLELKIIELQMKINNLIVALSVA 398 I + + + + + ++ + ++E++I+ LQ ++ + ++ A Sbjct: 362 ITDEKLQAAWLEAVADLVKRKSLIDWDELHAILAETNSVEVEILNLQGELEIITGLMTKA 421 Query: 399 --------PEVTAIAEKIRLLD-------KELRRASVSLKTLKSKGVNSFSDFYAIDLTS 443 + T + L+ +L A L + A++ Sbjct: 422 SEDNKRIQQDQTEYLARFAQLEERYQHTVTKLDEAQALLARRQGVATELKQMRKALNGLK 481 Query: 444 KNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGI 478 L EK I D + I F NGI Sbjct: 482 PGALVWDEPLFRIITEKFTITMDG-SVKIEFKNGI 515 >UniRef50_C2RWE8 Cassette chromosome recombinase B n=1 Tax=Bacillus cereus BDRD-ST24 RepID=C2RWE8_BACCE Length = 561 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 96/542 (17%), Positives = 193/542 (35%), Gaps = 77/542 (14%) Query: 2 KKAIAYMRFSSPGQMS-GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 K+ Y R S+ Q G S++ Q RL+ ++ + Y+ Y D G+S K Sbjct: 22 KRVAIYARVSTTEQAEEGYSIDEQIRLLHQYCEREG--YVVHKEYADRGISGKSIKG--R 77 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 A + LD +LV +RL+R + + ++ + + I + + Sbjct: 78 AALQQLLDDAREKLF---DIVLVWKSNRLARN-ILDMLKIVDFLKQRSITFRSYSEQYET 133 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 + ++++ I A E + + VK+ + ++ +G + + Sbjct: 134 ETSTGKLQFNMMAVI-----AEFERDNIAENVKMGMLARAREGSWNGGQVLGYDTKKFQS 188 Query: 181 DDKR---TAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVI 237 ++++ T V + T+ IF+L E +IA N ++ G + + + I Sbjct: 189 ENRKGVITGLVVNEMEAATVRRIFELYTEGHGYKSIANRANKEGHRSKKG--NLFSINAI 246 Query: 238 EKLLANKALIGICVPSYRARG--KGISEI-------AGYYPRVISDDLFYAVQEIRLAPF 288 + ++ N IG + R K + I G + +I+++ + Q I Sbjct: 247 KTIITNPIYIGYIRYNVRRNWNEKRRNNINPDPIVQKGQHEPIITEETWKKAQSILKNRS 306 Query: 289 GISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLH-------GYYVCPMRRLHR--- 338 N S + L ++KC CG M++ + YYVC + Sbjct: 307 KTPNRSHSGGF--PLTGIIKCPVCGAGMVLGRTTNKRKDGSKRVLEYYVCGKWKNKGSSA 364 Query: 339 CDRPSIKRDLVDYNIINELL---------------FNCSKIQPVENKKDANETLELKIIE 383 C I+ + D ++N++ N S E + L+ + Sbjct: 365 CRSNGIRTEYADDYVLNKIAKFANSNTLIKDVVKRINNSYRLTSEPLQKEYTVLKNSLEA 424 Query: 384 LQMKINNLIVALSVAP-EVTAIAEKIRLLDKELRRASVSLKTLKS--------------- 427 +Q K + ++V + ++ LD+E + + + L+ Sbjct: 425 IQSKKDRILVLYEDGILNKVDLKNRLIKLDEEKKLLNERIAPLEQQLGQGTKKELTFQMV 484 Query: 428 -KGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFM-NGIVFKHYPL 485 K + SF++ Y +TS E + L + KI I + I N V KH+ Sbjct: 485 KKVMQSFTESYKRSITS----EQRKQLLHLLINKITIADNRNIESIQIQLNNEVVKHFSK 540 Query: 486 MK 487 + Sbjct: 541 EE 542 >UniRef50_B0P5W1 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P5W1_9FIRM Length = 639 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 96/478 (20%), Positives = 175/478 (36%), Gaps = 49/478 (10%) Query: 4 AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAF 63 A+ Y R+SS Q S+ +Q + E+ + NS ++ Y D +S GK + F Sbjct: 18 AVIYARYSSHNQRD-VSIEQQVKQCQEFAQQNSFQIIE--IYADRAIS---GKTDKRPNF 71 Query: 64 SEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNID 123 + E ++ +R+ R + + K + + GI V +Y + Sbjct: 72 QRMMRDAEKKKFK---YVIAWKSNRMGRNMLQAMMNEAK-LNDLGIRV-------LYAEE 120 Query: 124 SLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDK 183 ++ + A+ N+ S + K+ D I P D Sbjct: 121 DFDDTAAGRFALRSMMNVNQ---FYSENMAEDIKRGLYDNAAKCKIANGGLPLGYKKGDD 177 Query: 184 RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLAN 243 + DP + + IF S IA LN +K GK AWG + LL N Sbjct: 178 -LRYALDPPNDEIVREIFSRTACGDSFADIAADLNARGIKTSRGK--AWGKNSFHALLTN 234 Query: 244 KALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLL 303 + G+ + G I G P+++ LF+ VQE+ + LL Sbjct: 235 ERYTGVYIY-------GDIRIEGGVPQIVDKGLFFRVQEVLKTKKNPQGRHR-INGDYLL 286 Query: 304 RTVMKCEACGNTM---IVHAVSGSLHGYYVCPMRRL-HRCDRPSIKRDLVDYN------- 352 + C C + M +G LH YY+C RR+ CD+ +I+RD +++ Sbjct: 287 TGKLFCGHCKSPMAGISGTGKNGKLHHYYICQKRRMEKSCDKANIRRDKIEHEVAVAIRN 346 Query: 353 ------IINELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTAIAE 406 ++ + + + +LE ++ E + NL+ A+ + + Sbjct: 347 YIMRDDVLEWIADSAMTFAKEYRNQTCIGSLETQLAENKQATKNLLTAIEHGIITSTTKD 406 Query: 407 KIRLLDKELRRASVSLKTLKSKGVN-SFSDFYAIDLTSKNGRELCRTLAYKTFEKIII 463 ++ L++E L ++ ++ S D + KNG + K F+ +I Sbjct: 407 RLLELEREQAILVSRLDEEQASLLHYSRDDIISAMSLYKNGNIEDKAFQAKLFDTFLI 464 >UniRef50_C4ZE41 Site-specific recombinase n=17 Tax=Bacteria RepID=C4ZE41_EUBR3 Length = 536 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 88/520 (16%), Positives = 171/520 (32%), Gaps = 85/520 (16%) Query: 5 IAYMRFSSPG--QMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 Y R S Q +S++ Q+R++ + K N + + Y D G + G + Q Sbjct: 12 ALYPRLSHEDELQGESNSISNQKRILETYAKQNG--FSNLRWYTDDG---YSGANFQRPG 66 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F L IE G + T++V+ + RL R + + + G+ I + D Sbjct: 67 FQAMLADIEAGKVG---TVIVKDMSRLGRNYLQVGMYTEMIFPQKGVRFIAINDGVDSAQ 123 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 + ++ ++ I + S ++K + K SG +T+ +D+ Sbjct: 124 G--DNDFAPLRNIFNEWLVRD----TSKKIKAVKRSK----GMSGKPITSKPVYGYLMDE 173 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNF---------------SG 227 F+ D + ++ I+ L + IA+ L + + G Sbjct: 174 DEN-FIIDEEAAPVVKQIYNLCLAGNGPTKIARMLTEQQIPTPGTLEYRRTGSTRRYHPG 232 Query: 228 KESAWGPSVIEKLLANKALIGICVPSYRAR--GKGISEI----------AGYYPRVISDD 275 E W + + +L N+ G V + K + ++ +I Sbjct: 233 YECKWATNTVVHILENREYTGCLVNFKTEKLSYKVKHSVENPPEKQVIFENHHEPIIDTQ 292 Query: 276 LFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHA--VSGSLHGYYVCP- 332 + VQE+R + + L ++ C CG+ M Y+C Sbjct: 293 TWERVQELRKQRKRPNR----YDEVGLFSGILFCADCGSVMYQQRYQTDKRKQDCYICGS 348 Query: 333 -MRRLHRCDRPSIKRDLVDYNIINELLFNCS----------KIQPVENKKDANETLELKI 381 +R H C I+ DL+ +++ L S K+ +N+ K Sbjct: 349 YKKRTHDCTAHFIRTDLLTAGVLSNLRKVTSYAAKHEARFMKLLIEQNEDGGKRRNAAKK 408 Query: 382 IELQMKINNLIVALSVAPEV------------------TAIAEKIRLLDKELRRASVSLK 423 EL+ + ++ + + R L + L Sbjct: 409 KELEAAEKRIAELSAIFKRLYEDSVTGRISDERFTELSADYEAEQRELKERAAAIQAELS 468 Query: 424 TLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIII 463 + VN+ F + + EL TL + EKI++ Sbjct: 469 KAQEATVNAEK-FMNVVRRHTSFEELTPTLLREFVEKIVV 507 >UniRef50_A5FPJ2 Resolvase, N-terminal domain n=8 Tax=root RepID=A5FPJ2_DEHSB Length = 555 Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 98/531 (18%), Positives = 197/531 (37%), Gaps = 66/531 (12%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 K+A+AY+R SS Q+ G SL+ Q RL E K + Y + G SA + Sbjct: 5 KRAVAYVRVSSVSQVEGYSLDAQERLFTELCKNRG--WQSVRIYREEGKSAHVDSIHKRP 62 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F + L+ ++V +LDR SR + +E LK++ HGI ++++ +N Y+ Sbjct: 63 VFRKLLEDAAK---DEFDVVVVHTLDRWSRN-LTVTLESLKILGKHGIGLVSIVENLDYS 118 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 P ++ ++ A SE S+ V+ ++ + +G+I W + + Sbjct: 119 K-----PDGILFTQMLGAFAQYFSEALSTHVRKGLDQRAYEGKHNGSIPFGYESCWETNE 173 Query: 182 DKRTA----------FVPDPDRVKTIELIFKLRMER-RSLNAIAKYLNDHAVKNFSGKES 230 P + E +F+ +L+ +A +LN+ + + K Sbjct: 174 KGEKKQRCEPEHQSGTHIHPKEGQAAEGLFRRYSSGTTTLSQLAVWLNEQGFRTRNTKNL 233 Query: 231 A------------WGPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFY 278 + S + +L N G RGK + G + +IS +LF Sbjct: 234 PDANGNLVSGPRLFTSSSVRSILHNPFYTG----QINHRGKLM---PGAHEALISQELFD 286 Query: 279 AVQEIRLAPFGISNSSKN-PMLINLLRTVMKCEACGNTMIVHAVSGSLHGYY-VCPMRRL 336 VQ G S + K P LL+ +++C CG M Y R + Sbjct: 287 LVQLTLRKNSGRSETLKTLPDREYLLKGLVRCSHCGMPMWAQTYKSGKSYYREHKASRSI 346 Query: 337 HRCDRP--SIKRDLVDYNIINELLFNC-------SKIQPVENKKDANETLELKIIELQMK 387 C +I ++D + EL+ ++ + + KD + ++ + K Sbjct: 347 KECPGHGGTIACQVIDKQV-RELVSAIELGPRWLEEVLSIISLKDEVDRVKKERDLTITK 405 Query: 388 INNLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLT----- 442 ++ + + + + ++ + +SL++L ++ + + L Sbjct: 406 LHRMAR-----VFMDGLIPE-EEYSRQKKLLELSLESLVVPDYDAAQEAGNLILNLSSLW 459 Query: 443 SKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKHYPLMKVISAQQ 493 SK R + + + ++ I F+ P+ +V +++ Sbjct: 460 SKANLSEQRKILLTMLDGVYVDVKEHRSVIAVKAKPPFR--PIFQVAVSKK 508 >UniRef50_C0X7M1 Cassette chromosome recombinase B n=5 Tax=Enterococcus faecalis RepID=C0X7M1_ENTFA Length = 470 Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 97/487 (19%), Positives = 192/487 (39%), Gaps = 47/487 (9%) Query: 2 KKAIAYMRFSSPGQM-SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 KKA Y+R S+ Q G S+ Q + ++++ ++ Y D G SA K + Sbjct: 9 KKAAIYIRVSTQEQATEGYSIQAQTDRLTKYVEAKD--FILYKKYIDAGYSASK---LER 63 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 A E + ++ + ++V LDRLSR + + + +++I++ + Sbjct: 64 PAMQELIQDVQSKKV---DVVIVYKLDRLSRSQKDTMYLIEDIFRPNDVELISMQE---- 116 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 + D+ S +++ A E + S R+ ++ + T P Sbjct: 117 SFDTSTAFGSATVG-MLSVFAQLERKSISERMITGRVERAKKGFYH-TGGQDRPPAGYQF 174 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 + V + I+ +F+L + ++I++YL KN+ GK + W PS I ++ Sbjct: 175 NSD-NQLVINEYEAAAIKDLFRLYNDGLGKSSISEYLK----KNYPGK-NKWLPSSIHRM 228 Query: 241 LANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLI 300 L N IG S +E G + +I + FY Q + ++K + Sbjct: 229 LKNSLYIGKVKFS-------GAEYDGIHEPIIDEVTFYKTQ--KEIARRKQTNTKRYNYV 279 Query: 301 NLLRTVMKCEACGNTMIVHA---VSGSLHGYYVCPMRRLH--------RCDRPSIKRDLV 349 LL + +C CG M G ++ YY C ++ C + ++ ++ Sbjct: 280 ALLGGLCECGICGAKMANRRSVGRKGKVYRYYRCYSKKGSPIHMMKIDGCPSKAQQQFII 339 Query: 350 DYNIINEL--LFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSV-APEVTAIAE 406 D +IN L + ++++ + + +I + +IN LI V + + I+E Sbjct: 340 DEAVINNLKNIDVEAELKKRSAPQTNTSLISSQIESIDKQINKLIDLFQVDSMPLDVISE 399 Query: 407 KIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLT---SKNGRELCRTLAYKTFEKIII 463 KI L+KE + L+ +AI + + E R + +K+II Sbjct: 400 KIDKLNKEKQSMEKLLERKNKLDKTELQHRFAILKSFDWDNSSIESKRAVIEMLVQKVII 459 Query: 464 NTDNKTC 470 + ++ Sbjct: 460 HDNSIEI 466 >UniRef50_UPI0001692EF6 hypothetical protein Plarl_21271 n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001692EF6 Length = 475 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 88/498 (17%), Positives = 181/498 (36%), Gaps = 67/498 (13%) Query: 3 KAIAYMRFSSPGQMS-GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 + Y+R S+ Q G S++ Q+ + + + D Y D G + G Sbjct: 2 RVAIYIRVSTEEQAQYGYSIDAQKERLIAYCTSQG--WTDYKIYIDDG---YTGTKMMRP 56 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 A + + IE I ++V LDRLSR+++ ++ H + + + Sbjct: 57 ALNRLIRHIEDDKI---DLVVVYKLDRLSRKQLDVLYLLEEVFEKHNVGFKSATEPFETT 113 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 P+ ++A A E ++ R + R+ + G P ++ Sbjct: 114 T-----PFGKAMIGILAVFAQLERDMIVERTTIG----RRQRVSKGEWYGGRIPFGYRMN 164 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 + P+ K I+ I+K+ ++ S +IA++ + K SVI +L Sbjct: 165 RETKQLEIVPEEAKIIKEIYKMYLQGNSRLSIAEWAAER------TKARVIDHSVIRDIL 218 Query: 242 ANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLIN 301 + G + + G + +I + ++AVQ P+ Sbjct: 219 SRPVYTGKL-------SNAGNVVDGKHEAIIDEKTWHAVQ----KETQERKEGATPLGEY 267 Query: 302 LLRTVMKCEACGNTMI----VHAVSGSLHGY--YVCPMR------RLHRCDRPSIKRDLV 349 LL ++KC CG ++ + G + Y Y C + R + C I+R+ V Sbjct: 268 LLTGLLKCGVCGGPIVHVKRITRKYGKEYLYELYACKNQHVRKKDRNNNCSLGYIRREKV 327 Query: 350 DYNIINELL-----------FNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVA 398 + +I ++ K + EN + A LE ++ ++ + NL A+ Sbjct: 328 EKFVIEQIKSYTTDDVLIKQITNEKNKFKENDESALNNLESQLKKVLTGLENLYDAIESG 387 Query: 399 -PEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRE--------L 449 + ++I+++IR L+++ + +K + + ++ K E Sbjct: 388 EIKASSISDRIRKLEEQRDVLENHIDEIKDNTPQNELNIQEFNIFIKEIGEAWDYLTEDE 447 Query: 450 CRTLAYKTFEKIIINTDN 467 + L K F + + D Sbjct: 448 QKALIRKAFRSVTLYKDK 465 >UniRef50_A4X6D7 Resolvase, N-terminal domain n=1 Tax=Salinispora tropica CNB-440 RepID=A4X6D7_SALTO Length = 546 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 84/449 (18%), Positives = 149/449 (33%), Gaps = 49/449 (10%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 M + Y R S+ + ++ Q + + ++ + + T + D G Sbjct: 20 MLRVAIYTRRSTDDEHQPYTIEAQTQKLTAYVDSQPGWQI-TARFTDDA----SGATLDR 74 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 ++ L A G LLV LDR SR ++ + + + G+ + + Sbjct: 75 PGLTKALAAARAGRF---DLLLVYRLDRFSR-RIRDLATLMDDLDAAGVHFRSATEPFD- 129 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 + P + ++ A E E+ RV ++K G P + Sbjct: 130 ----TSSPAGRLFVQMLGAFAEFEREVIIDRVINGMERKAAK----GEWTHGPRPYGYLV 181 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRME-RRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEK 239 D VP PD ++ IF L R AIA LN+H + +GK W I + Sbjct: 182 DPDTHRLVPHPDEQHIVKEIFDLYAGTRLGTRAIAAKLNEHGKRTRAGKP--WSGHTIGR 239 Query: 240 LLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPML 299 +L N+ +G G +P ++ +DLF Q I A + Sbjct: 240 MLGNRLYLGEV-------GFRDVTAEYAHPPLVDEDLFNQCQAILEARGEAHSQRAAANS 292 Query: 300 INLLRTVMKCEACGNTMIVHAVSGS--LHGYYVCPMRRL---HRCDRPSIKRDLVDYNII 354 L + C CG + + +G + YY C R CD I DL+D + Sbjct: 293 DYDLTGRITCPKCGCKYVGTSATGKLRRYRYYTCFTRARYGSSGCDAARIDADLLDGTVA 352 Query: 355 NELLFNCSKIQPVENKKDANETLEL---------------KIIELQMKINNLIVALSVAP 399 L+ K + A TL +I + ++ + A Sbjct: 353 EGLIDFFRKPDLIIEAVAAERTLRADGADRHQAELDAIAGQISTAEAAVDRYLTAFENGT 412 Query: 400 -EVTAIAEKIRLLDKELRRASVSLKTLKS 427 + +++ L ++L + L Sbjct: 413 LDERTCGHRVQDLTRKLDQLRARQDELHQ 441 >UniRef50_A6NPY6 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NPY6_9BACE Length = 483 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 79/499 (15%), Positives = 174/499 (34%), Gaps = 51/499 (10%) Query: 2 KKAIAYMRFSSPGQMSGDS--LNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 + Y+R S + G+S ++ QR + ++ + Y D G + G Sbjct: 4 PRVGLYLRLSREDEEKGESQSISNQREYLRQYAAARG--WTVAAIYTDDG---YTGTSFN 58 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 F + L +E G I T+L + L RL R+++G + I + + Sbjct: 59 RPGFRQLLADVEAGKI---NTVLTKDLSRLGRDQIGTMYYYQIYFPQRRVRYIAVSEG-- 113 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 ID+ + +A + + S +V+ + + +++ SG + A P Sbjct: 114 --IDTGAAGSGELILPFLAAANDFYTADISRKVRTALEVRKK----SGRFIGAQPPIGYR 167 Query: 180 LDDKR-TAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESA------- 231 D + +PDP+ I L+F+ + S++ A+ + + + S + Sbjct: 168 KDPEEPGHLIPDPETGPIIGLLFRTFLSCGSVSGTARAMTEGGIPTPSQYKKGAQGRFPG 227 Query: 232 -WGPSVIEKLLANKALIGICVPSYRARGKGISE------------IAGYYPRVISDDLFY 278 W +++ ++L N G + + E + + ++S +F Sbjct: 228 LWSGTMVRRILTNPTYAGHLTQNRARKVGYKVEKRVTLPREAWIVVPNTHQPLVSQQVFD 287 Query: 279 AVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHR 338 Q + + +LL + C CG+ M + Y VC R Sbjct: 288 RTQALLAVRSYAPKAGN----SHLLTGLAFCADCGSPMTYVSSRDGTC-YMVCQGNRRGG 342 Query: 339 C-DRPSIKRDLVDYNIINEL-LFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALS 396 C ++ D V +I +L + E ++ + E K++ + + Sbjct: 343 CASSHCVREDAVLESIRRQLAVLAADTGAQAEPPEEHLPSREDKMVAMTRWADTAGRLYR 402 Query: 397 VAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYK 456 E+ L + RR + + +++ + + + + L R Sbjct: 403 DRMAGLLTEEEFCALLDQARRTREAAERYRTQASAACEAAWQAETLER----LDRDTLTA 458 Query: 457 TFEKIIINTDNKTCDIYFM 475 E++++ KT +++F Sbjct: 459 LVERVLV-HREKTLELFFR 476 >UniRef50_A6NXM2 Putative uncharacterized protein n=4 Tax=Bacteria RepID=A6NXM2_9BACE Length = 544 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 90/532 (16%), Positives = 181/532 (34%), Gaps = 76/532 (14%) Query: 3 KAIAYMRFSSPG--QMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 + Y R S ++ +S+ QR + +++ + D L + D G + G Sbjct: 7 RTAIYCRLSREDGDKVESNSIASQRAICEDYIARHEDLELVCEPFVDDG---YSGVSFNR 63 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 F + +AI G + ++V+ L R SR + K+ GI I + D Sbjct: 64 PQFKKLEEAIRKGAL---DCIVVKDLSRFSRNYIDGGRYIEKIFPQLGIRFIAIND---- 116 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIK--SSRVKLSWKKKRQDALESGTIMTASCPRWL 178 DSL ++ + +S K S +++ S + K++ SG + + P Sbjct: 117 AYDSLTGDPQSDSFVIPFKNLINDSYCKDISMKIRSSLEVKQK----SGEFVGSFAPYGY 172 Query: 179 -SLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHA------VKNFSG---- 227 + + + D + +++IF + + S+ IAK LN K+F+G Sbjct: 173 MKSPENKNQLIVDEAVSEYVQMIFSMYKDGFSIGRIAKRLNQMGVLSPMEYKHFAGVKFD 232 Query: 228 ------KESAWGPSVIEKLLANKALIGIC------VPSYRARGKGIS------EIAGYYP 269 + W ++++L N+ IG+ P+Y+ R ++ + Sbjct: 233 TVFKTCDTAKWTYKAVQRILTNEVYIGVLAQGKRGTPNYKVRVVKSKDESEWVKVENAHE 292 Query: 270 RVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAV--SGSLHG 327 ++S + F AV+ + S + +L + C C MI V + Sbjct: 293 ALVSYEDFMAVKVMMQRDMRCS---PDQDEAHLFSGFLFCGDCQQPMIRKTVPSKTKKYI 349 Query: 328 YYVCP-MRRLHRCDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETL--------- 377 YYVC + C SI V+ + + + +E+ E L Sbjct: 350 YYVCSTNKHSRTCSPHSIAAKEVEEKVFRAIHDQIELVINLEHALAMIERLPSQSRKAFN 409 Query: 378 -ELKIIELQMKINNLIVA--------LSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSK 428 E +I ++ +I + + + E K + +L +K + Sbjct: 410 YEAQIAKIGEEIERYQKLKLGLYENFIGGVIDKSEYFEFRNSYTKIIEDKQEALLRVKKE 469 Query: 429 GVNSFSDF-----YAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFM 475 + + + E + I+ +N +I F Sbjct: 470 MKQTVTTGTTERNWVTLFKQYENVEELNRRVLMSLVDRILIHENHAIEIVFK 521 >UniRef50_B5DC77 Putative recombinase (Fragment) n=1 Tax=Geobacillus stearothermophilus RepID=B5DC77_BACST Length = 503 Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 94/497 (18%), Positives = 171/497 (34%), Gaps = 57/497 (11%) Query: 3 KAIAYMRFSSPGQM-SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 + Y+R S+ Q G S+ Q+ + + + Y D G SA K + Sbjct: 2 RTALYIRVSTEDQAREGYSIQMQKEKLHAYCVSQG--WDIEGFYIDDGYSA---KDLERP 56 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 A ++ I+ G I +LV LDRL+R V + LKL H + + VY+ Sbjct: 57 AMKRMIENIQQGLI---DCVLVYRLDRLTRS-VLDLHNLLKLFDEHDCKFKSATE--VYD 110 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 + + +A A E E + RVK + Q + G L+ Sbjct: 111 TTTA---TGRMFITFVAALAQWERENTAERVKANM----QQMVHEGKYPGGKVNFGYRLE 163 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 K+ V D + +F L +E N A LN + G+ W + +L Sbjct: 164 GKK--IVIDEQEAAVVHKMFDLYLEGNGDNRTATLLNRMGHRTRQGR--LWTGKQVRDVL 219 Query: 242 ANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLIN 301 N+ IG G P +I + F Q++R G + Sbjct: 220 TNQVYIGRFFYMDEYH-------DGIIPPIIEREKFETAQKMREGRRG--KHPRQVASDY 270 Query: 302 LLRTVMKCEACGNTMIV----HAVSGSLH--GYYVCPMRRLHRCDRPSIKRDLVDYNIIN 355 + V++C CG M H ++ Y C CD P + ++ + Sbjct: 271 IFSGVLRCARCGRVMPGKLSNHTKKNGVYARRKYTCRGTFTKLCDMPMLDEQAIEEVFLR 330 Query: 356 EL----------LFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAP----EV 401 + S Q ++ + +E ++ E++ + L +A + E+ Sbjct: 331 YIREIRDASAASEVAASYEQDSDHISRQIQDIETQLDEIKKRRKRLQLAFANEVISLEEL 390 Query: 402 TAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKN-----GRELCRTLAYK 456 + + R ++KEL+ LK + G S + I + + + L Sbjct: 391 KELTGEDRKIEKELQNKLEELKEQEESGEVSPQELIEILMQFGENWNHLSDKEKKNLVSM 450 Query: 457 TFEKIIINTDNKTCDIY 473 ++I + +N + + Sbjct: 451 FIKEIYVQAENTRPNRW 467 >UniRef50_D0AKJ5 Resolvase n=9 Tax=Bacilli RepID=D0AKJ5_ENTFC Length = 545 Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats. Identities = 86/513 (16%), Positives = 190/513 (37%), Gaps = 64/513 (12%) Query: 2 KKAIAYMRFSSPGQM-SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 K+ Y+R S+ Q G S+ Q + ++ + Y Y D G+S K+ Sbjct: 7 KRVALYIRVSTQEQALEGHSIQAQEQNGRQFAERMG--YEVVEVYADEGISGKSTKN--R 62 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 A+ + + L++ L RL R + + ++ ++ +L + + + ++ + Sbjct: 63 FAYQRMMKDARN---HRFDLLVIWKLTRLGRN-MLDVLQTVEELLRYDVGLHSISEQFDV 118 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 + + L+ E + V++S + +D + Sbjct: 119 TTSTGK-----LMLQLLGSFGEFERNQIAENVQMSMQSLVKDKKRYAGGRRLGYVSGIDT 173 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 + ++ V +P+ K + LI+ + AIA +LN + K++A+ + ++ + Sbjct: 174 NGQKQ-LVIEPEEAKIVRLIYAKYLGGAGYRAIANFLNRQGYQTV--KKNAFSTTAVKDI 230 Query: 241 LANKALIGICVP-------SYRARGKGISEI--AGYYPRVISDDLFYAVQEIRLAPFGIS 291 L NK G + R +GK I G + +IS++ + VQE Sbjct: 231 LRNKIYAGYLEYARYINWETKRRKGKNPKPILVKGTHEPIISEEDYQKVQERFALEGKQP 290 Query: 292 NSSKNPMLINLLRTVMKCEACGNTM-------IVHAVSGSLHGYYVCPMRRLHR---CDR 341 + N+L +++C CG M + + YY C + R C Sbjct: 291 KWNHTGE--NVLTGLLRCPECGAPMAASNVTNTLKDGTKKRIRYYSCSVFRNKGASVCHA 348 Query: 342 PSIKRDLVDYNIINELLFNCS------KIQPVENKKDANET--LELKI-------IELQM 386 SI+ + + + + L ++ N++ ++ LE ++ EL+ Sbjct: 349 NSIRAEQAETFVADRLKEIIQLPEVLPRLVAALNEEIVRQSQPLEQELVVLLERKEELKT 408 Query: 387 KINNLIVALSVAPEV-TAIAEKIRLLDKELRRASVSLKTL-----KSKGVNSFSDFYAID 440 KI AL +PE+ + +++ L ++ R+ + + + D I Sbjct: 409 KIEKWEAALEDSPELFPMLKDRLDELTEKRRQLHIRENEILGIFQQQGEPIQVKDVQRIL 468 Query: 441 -----LTSKNGRELCRTLAYKTFEKIIINTDNK 468 +++ ++ + L EKI + ++K Sbjct: 469 TSLDRFLAQSEKKQIKALYRTFIEKITFDPNHK 501 >UniRef50_A5ZV57 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A5ZV57_9FIRM Length = 542 Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats. Identities = 89/522 (17%), Positives = 189/522 (36%), Gaps = 76/522 (14%) Query: 4 AIAYMRFSSPG--QMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 Y+R S + DS+ QR+L+ E++ + D+ L Y D G F G + Sbjct: 12 VAIYIRLSREDGDKEESDSVGNQRKLLTEYVNKHDDFIL-YDVYIDDG---FTGTNFNRP 67 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F + IE + ++V+ L R R+ + ++ + I++ DN Sbjct: 68 DFHRMIADIEDNKV---NCVVVKDLSRFGRDYIDTGRYLERIFPELNVRFISVTDN---- 120 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 IDS+ + Y ++ I +I S++++ + K K++ +G + A Sbjct: 121 IDSMKQAYDMLLPIKNIFNEQYARDI-SNKIQATVKSKQK----AGEFIGAFTSYGYKKS 175 Query: 182 D-KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAV------KNFSG------- 227 + V D + ++ +F + + +IAK LN + K +G Sbjct: 176 PANKNKLVIDEYASEVVKRVFTMYAQGIGKQSIAKILNAEGILCPSEYKKLNGENYKNCN 235 Query: 228 ---KESAWGPSVIEKLLANKALIGICVPSYR----------ARGKGISEIAGYYPRVISD 274 K S W S I+ +L N+ IG V + + + + +I Sbjct: 236 RLEKTSYWTYSTIKVMLQNELYIGNMVQGKKHQRMRSKQRPVEKENWIRVENTHEPIIDR 295 Query: 275 DLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMI----VHAVSGSLHGYYV 330 L+ VQ++ + N N+ +KC CG M+ A + +Y Sbjct: 296 QLWDKVQKLLTKKHRDIDLETNK---NIFAGFIKCGDCGRAMMKNFWRRADGSKSYSFYC 352 Query: 331 CPMRRLHR--CDRPSIKRDLVDYNI---INELLFNCSKIQPVENKKDANETLELKIIELQ 385 +R + C ++ +++ + + +++ N +Q + + T K +++ Sbjct: 353 GTYKRSGKDYCTPHTLPFQVLNDIVLGDLKQIIRNVENLQELVKSQSFTATKIRKSTDIE 412 Query: 386 --------MKINNLIVAL-----SVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNS 432 ++ L ++ ++ S ++TL+ K S Sbjct: 413 LTKLKAELERVKKLKKSIYEDYKDELISKEEFLSYREDYQQKETLYSKQIETLEEKKKES 472 Query: 433 FSD------FYAIDLTSKNGRELCRTLAYKTFEKIIINTDNK 468 ++ + L K+ EL R + + ++I + + K Sbjct: 473 VTEDVFETPWLRRLLELKDIEELDRDIIVEMIDQITVYENRK 514 >UniRef50_C9S0X0 Resolvase domain protein n=3 Tax=root RepID=C9S0X0_GEOSY Length = 462 Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats. Identities = 90/481 (18%), Positives = 169/481 (35%), Gaps = 49/481 (10%) Query: 3 KAIAYMRFSSPGQM-SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 K Y+R S+ Q G S+ QR + + + Y + G SA K Sbjct: 2 KVAIYVRVSTDEQAKEGFSIPAQRERLRAFCASQG--WEIVQEYIEEGWSA---KDLDRP 56 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 L I+ G I +LV LDRL+R V + L+ + + + + VY+ Sbjct: 57 QMQRLLKDIKKGNI---DIVLVYRLDRLTRS-VLDLYLLLQTFEKYNVAFRSATE--VYD 110 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 + + L+A A E E + RVK ++ ++ G P D Sbjct: 111 TSTA---MGRLFITLVAALAQWERENLAERVKFGIEQM----IDEGKKPGGHSPYGYKFD 163 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 + + +I+++ + +IA LN+ VK KE W + + +L Sbjct: 164 KDFNC-TIIEEEADVVRMIYRMYCDGYGYRSIADRLNELMVKPRIAKE--WNHNSVRDIL 220 Query: 242 ANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLIN 301 N IG + + +P +IS+ LF Q+ + + + Sbjct: 221 TNDIYIGTYRWGDKV-------VPNNHPPIISETLFKKAQKEKEKR----GVDRKRVGKF 269 Query: 302 LLRTVMKCEAC-GNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYN--IINELL 358 L +++C C G+ M H YY C + + +I L+D +I Sbjct: 270 LFTGLLQCGNCGGHKMQGHFDKREQKTYYRCT-KCHRITNEKNILEPLLDEIQLLITSKE 328 Query: 359 FNCSKIQPVENKKDANE--TLELKIIELQMKINN---LIVALSVAPEVTAIAEKIRLLDK 413 + SK ++++ + L ++ +++ + L + + KI L+K Sbjct: 329 YFMSKFSDRYDQQEVVDVSALTKELEKIKRQKEKWYDLYMDDRNPIPKEELFAKINELNK 388 Query: 414 ELRRASVSLKTLKSKGVNSFSDFYAID--LTSKNGRELCR-----TLAYKTFEKIIINTD 466 + L ++ + + + K E L + FEKI+I + Sbjct: 389 KEEEIYSKLSEVEEDKEPVEEKYNRLSKMIDFKQQFEQANDFTKKELLFSIFEKIVIYRE 448 Query: 467 N 467 Sbjct: 449 K 449 >UniRef50_B0TD54 Resolvase, n-terminal:recombinase, putative n=3 Tax=Clostridiales RepID=B0TD54_HELMI Length = 536 Score = 224 bits (570), Expect = 7e-57, Method: Composition-based stats. Identities = 91/525 (17%), Positives = 181/525 (34%), Gaps = 65/525 (12%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 + AY R SS +S Q ++ N ++ L I Y D G++ + + Sbjct: 38 RIAAYARVSSDSDDQLNSFAAQVSHYTTLIRENENWELVDI-YADEGVTGLR--MDKRED 94 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F L G I +L +S+ R SR E +E ++ + + G+ + ++ Sbjct: 95 FQRLLRDCRKGKI---DRILTKSISRFSRNT-RECLETIRELKSLGVTIYFEKEHID--- 147 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 E + + + A +ES S ++ S++ + +++G +T P L Sbjct: 148 --TGEISNEMLLTFFSGNAQQESMSISGNMRWSYQHR----MKNGKFITCKAPLGYRLQS 201 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 + + +F + +S + IA L V GK+ W S I+ LL Sbjct: 202 G--TLQIHEQEAEIVRYVFNSYLNGKSKDEIAAELTAQGVPTRDGKD-RWHYSTIDYLLK 258 Query: 243 NKALIGICVPSYR--------ARGKGISEIAGY-----YPRVISDDLFYAVQEIRLAPFG 289 N+ G + R + + E Y +P +IS D+F QE+ + Sbjct: 259 NERYAGDALLQKRYTTAVLPFQKKRNKGEKDKYYVKYSHPAIISRDIFERAQELNQSRNI 318 Query: 290 ISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHR--CDRPSIKRD 347 + S ++ + L ++C CG+ +G Y+VC + C I Sbjct: 319 PTMSKRS---MYPLSKRIRCGECGSLFKRKTCNGKT--YWVCRNHNKGKSNCTVTQIPEP 373 Query: 348 LV---DYNIINELLFNCSK-----IQPVENKKDANETLELKIIELQMKINNLIVA----- 394 + + ++L N K + ++ K L+++EL +I L Sbjct: 374 EIYGAFLRLYHKLKLNYDKILSPMLDQLQALKRHRNLSNLQVVELNRQIAELTERNHVLN 433 Query: 395 -------LSVA---PEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSK 444 + A + ++ KIR L E + K + I Sbjct: 434 GLKSKGIIDSALFISQTDELSRKIRALKAEKNKLME--KDEDDSAITETRSLIEILEDGP 491 Query: 445 NGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKHYPLMKVI 489 + + +++ + +NG+ P+ + + Sbjct: 492 ERLSGFDETLFDSIVELVTAESGERLKFKLINGLELAE-PIERTV 535 >UniRef50_D2BJ82 SsrA integrase n=2 Tax=Dehalococcoides RepID=D2BJ82_DEHSV Length = 558 Score = 224 bits (570), Expect = 8e-57, Method: Composition-based stats. Identities = 88/501 (17%), Positives = 187/501 (37%), Gaps = 62/501 (12%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 K+A+AY+R SS Q+ G SL+ Q RL E K + Y + G SA + Sbjct: 12 KRAVAYLRVSSVSQIDGHSLDAQERLFKELCKNRG--WEIIRIYREEGRSAHVEDIHKRP 69 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F + L + G ++V +LDR SR + IE L L+ + + + ++ ++ Y Sbjct: 70 IFKDLLGDAKKG---MFDVVVVHTLDRWSRN-LKVTIESLNLLGKYNVGLASIVESLDY- 124 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 + P ++ ++ A SE S+ +K +++ + +G + W + Sbjct: 125 ----SNPQGMLSLHMLGAFAQYFSESLSTHIKKGIEQRAVEGKRNGAVPFGYESCWEKEE 180 Query: 182 DKRTAFVPDPDR----------VKTIELIFKLRMERR-SLNAIAKYLNDHAVKNFSGK-- 228 + +P+ K ++ ++K +L+ +A +LND + + K Sbjct: 181 NGEKKRRCNPEHPGGVHIHRREGKAVKELYKRYAAGTVTLSELASWLNDEGFRTRNTKKI 240 Query: 229 ----------ESAWGPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFY 278 + + + +L N +G + + G + +++ LF Sbjct: 241 EDACGNLTTGPKLFTGASVRFILHNPFYMGKIKHRDKL-------LPGVHKPLVTKKLFD 293 Query: 279 AVQEIRLAPFGISNSS-KNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYY-VCPMRRL 336 VQ+ G S++ LL+ + +C CG M Y R + Sbjct: 294 LVQDTLKKNSGRSSTLCPKSNREYLLKGLARCAYCGMPMWAQTYHNGGRYYREHRASRSI 353 Query: 337 HRCDRP--SIKRDLVDYNIIN-----ELLFN-CSKIQPVENKKDANETLELKIIELQMKI 388 +C +I ++VD +I EL + ++ V + KD + + + ++ +K+ Sbjct: 354 EQCVAHGGTIPCEVVDRQMIELVSAIELKESWLEEVLSVISLKDEVDRVTKEREQVNIKL 413 Query: 389 NNLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLT-----S 443 + A +++ + ++L++L N+ + + + Sbjct: 414 KRMAKAYIDGLISDD------EYNRQKKVYGLALESLVVSDYNASEEAGKLIMNLLSLWD 467 Query: 444 KNGRELCRTLAYKTFEKIIIN 464 K R L + + I+ Sbjct: 468 KATLSEQRKLLLTMLDAVYID 488 >UniRef50_A3DBB4 Recombinase n=1 Tax=Clostridium thermocellum ATCC 27405 RepID=A3DBB4_CLOTH Length = 539 Score = 224 bits (570), Expect = 9e-57, Method: Composition-based stats. Identities = 90/549 (16%), Positives = 185/549 (33%), Gaps = 99/549 (18%) Query: 3 KAIAYMRFSSPGQMSGDS--LNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 + Y R S + SGDS + QR ++ + K N +D Y D G S G + Sbjct: 8 RTAIYCRLSRDDEQSGDSMSIENQRSMLTRYAKENGLEIIDW--YIDDGWS---GTNFDR 62 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 F IE G I +LV+ L RL R ++ ++ H + I + +N Sbjct: 63 PDFQRMKSDIEDGKI---DIVLVKDLSRLGRNQIETSLCIQVFFPQHDVRFIAVSEN--- 116 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 ID+ ++ L S +VK ++++ +G A P Sbjct: 117 -IDTAKGEDDFME--LRNLFNEWFVRDTSRKVKNGYRQRAL----NGDYTGAFAPYGYKK 169 Query: 181 DD-KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSG------------ 227 D+ + VPD + ++ IF++ +E S I+ L + Sbjct: 170 DEQDKHKLVPDENVAHVVKRIFQMAVEGYSPYKISMALRADKILTPRAYVAQEYQRYANV 229 Query: 228 ----KESAWGPSVIEKLLANKALIGICVPSYRARG------------KGISEIAGYYPRV 271 WG + I+ ++ NK +G V + E+ + + Sbjct: 230 FNPQYPYDWGATTIKIIIQNKVYLGHMVSHKYTKKSFKTKEVVAVPENEWIEVKNTHEPL 289 Query: 272 ISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLH----- 326 I ++ F Q+I + ++ + +++C CG ++ S + Sbjct: 290 IDEETFELAQKIIRVKKRPTKEGEHQ----IFAGLLRCSTCGQSLSFARGGNSKYSGGKG 345 Query: 327 --GYYVCPMRRLHR---CDRPSIKRDLVDYNIINELLFNC-------------------- 361 G + C R C I + I+ ++ N Sbjct: 346 GRGSFACNQSRRKGKEYCSFHYISYLDIYTVILEDIRKNAAIARENEAAFVEMVSDISKA 405 Query: 362 ---SKIQPVENKKDANETLELKIIELQMKI--NNLIVALSVAPEVT---AIAEKIRLLDK 413 ++ +K+ E ++ + K+ +N + ++ ++ ++ R + + Sbjct: 406 KLKKQVSAAAKEKEKLRHRENELQAILKKLYEDNALGKITDEQFISLSKDFTDEQRQIKE 465 Query: 414 ELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNK----- 468 L+ L + K N+ F + + +EL + + + +K+++ K Sbjct: 466 RLKALENILSQVTEKQENTAK-FLELVREYTDIKELTKPILNELIDKVVVFDAEKARGDR 524 Query: 469 --TCDIYFM 475 DIY+ Sbjct: 525 VQRIDIYYR 533 >UniRef50_A5KP69 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5KP69_9FIRM Length = 493 Score = 224 bits (570), Expect = 9e-57, Method: Composition-based stats. Identities = 93/503 (18%), Positives = 178/503 (35%), Gaps = 48/503 (9%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 K Y+R S+ GQ S + Q +L+ ++ K N L + +LG+S K + Sbjct: 4 KYCYGYVRVSTSGQEE-LSPDSQAKLLKDFAKKNDMIILQ--IFYELGISGRKAD--KRP 58 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F + + + P ++V R +R + + + L H +DV+++ + V Sbjct: 59 EFQKMIALAKSDK-HPVDCIIVWKFSRFARNQEESIVYKSLLKKKHNVDVLSVSEPLV-- 115 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 + P+ + +I S S V +K + A P + Sbjct: 116 ----DGPFGSLIERIIEWMDEYYSVRLSGEVTRGMTEKAKRGG-----YQARPPLGYKIQ 166 Query: 182 DKRTAFVPDPDRVKTIELIFKLRM-ERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 ++ V P+ + I++IF + E + IA+YLN K K + IE + Sbjct: 167 ERGKPPVIVPEEAEIIKIIFDKYVNEHTGIFDIARYLNLCGFKTSHNKP--FERRSIEYI 224 Query: 241 LANKALIGICVPSYRARGKGISEIA-------GYYPRVISDDLFYAVQEIRLAPFGISNS 293 L N G+ + G P +IS +LF Q + + S + Sbjct: 225 LQNPTYCGMIRWNRTVSETNEIRPESEWIVSDGQQPAIISKELFDKAQIRYKSEYKPSGA 284 Query: 294 SKNPMLINLLRTVMKCEACGNTMIVHAVSG-SLHGYYVCPMRRLHRCDRP-SIKRDLVDY 351 + + L +MKC CG TMI V+ + Y+ C +C S+ ++ Sbjct: 285 RPSSTYKHWLSGLMKCPVCGRTMIAKTVNNQKSYCYFTCYGYSKGKCLAKTSVSSLRLEP 344 Query: 352 NIINELLFNCSKIQPV--------ENKKDANETLELKIIELQMKINNLIVALSVAPEVTA 403 ++ + + E D N + ++ + K + + A + Sbjct: 345 AVLASIKEVLDTGNIIYRHVEPVQETSVDLNVIITEQLRKNAEKFDRIREAYRNGVDTLD 404 Query: 404 --------IAEKIRLLDKELRR---ASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRT 452 + E+ +L+K+L A ++ T K + + Y I + Sbjct: 405 EYKENKRMVQEEKEMLEKQLADIKPAEPTIDTSKIAMLEKVRNVYEIIESDSVDPVTKNE 464 Query: 453 LAYKTFEKIIINTDNKTCDIYFM 475 + EKII + +Y+ Sbjct: 465 ILKSVIEKIIYDRSKDELKVYYY 487 >UniRef50_C7GIC8 TnpX site-specific recombinase n=22 Tax=Bacteria RepID=C7GIC8_9FIRM Length = 537 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 92/520 (17%), Positives = 180/520 (34%), Gaps = 85/520 (16%) Query: 5 IAYMRFSSPG--QMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 Y R S Q +S++ Q+R++ + K N + + Y D G + G + Q Sbjct: 12 ALYPRLSHEDELQGESNSISNQKRILETYAKQNG--FTNLCWYTDDG---YSGANFQRPG 66 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F L IE G + T++V+ + RL R + + L G+ I + D + Sbjct: 67 FQAMLADIEAGKVG---TVIVKDMSRLGRNYLQVGMYTEMLFPQKGVRFIAINDGVDSAM 123 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 + ++ ++ + + S+ K ++ SG +T+ +D+ Sbjct: 124 G--DNDFTPLRNLFNEWMVRDTSKKI--------KAVKKAKGMSGKPVTSKPVYGYLMDE 173 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNF---------------SG 227 F+ D + ++ I++L + IA+ L + + G Sbjct: 174 DEN-FIIDEEAAPVVKQIYQLCLAGNGPTKIARMLTEQEIPTPGTLEYQRTGSIRRYHPG 232 Query: 228 KESAWGPSVIEKLLANKALIGICV------PSYRARGKGISEI------AGYYPRVISDD 275 E W + + LL N+ G V PSY+ + + I ++ +I Sbjct: 233 YECKWATNTVVHLLENREYTGCLVNFKTEKPSYKMKHSIDNPIEKQAIFENHHEPIIDLQ 292 Query: 276 LFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHA--VSGSLHGYYVCP- 332 + VQE+R + + L ++ C CG+ M Y+C Sbjct: 293 TWERVQELRKQRKRPNR----YDDVGLFSGLLFCADCGHVMYQQRYQTDKRKQDCYICGS 348 Query: 333 -MRRLHRCDRPSIKRDLVDYNIINELLFNCSKIQPVENK-------------KDANETLE 378 +R C I+ DL+ +++ L + Q E + K Sbjct: 349 YKKRTADCTAHFIRTDLLTAGVLDNLRKVTAYAQKHEARFVKLLIQQNEMGGKRKQAAAT 408 Query: 379 LKIIELQMKINNLIVAL--------------SVAPEVTA-IAEKIRLLDKELRRASVSLK 423 ++ ++Q +I L + E++A + R L ++ L Sbjct: 409 KQLEQVQSRIAELSRYIKRLYEDNVNGKINDERFMEMSADYEAEQRELKEKAAALQGELD 468 Query: 424 TLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIII 463 + VN+ F + + EL TL + EKI++ Sbjct: 469 KAQEATVNAEK-FMNVVRKYLSIEELTHTLLREMVEKIVV 507 >UniRef50_A9NFR7 Serine recombinase n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NFR7_ACHLI Length = 572 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 94/477 (19%), Positives = 180/477 (37%), Gaps = 54/477 (11%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 K+ AY+R S+ S QR + + N D+ D I Y D G+S K+ Sbjct: 27 KRVCAYVRVSTDNLEQKTSYEAQRDEYTQRITKNPDWIFDGI-YADEGISGTSTKN--RK 83 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F+ ++ G I +L +S+ R +R V +A+ ++ + +++I +N Sbjct: 84 QFNLMIEKARAGQI---DIILTKSISRFARNTV-DALNYIRELRQINVEIIFEKENI--- 136 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 S +P +++ A EE+ S VK + +++ ++ + I+ + D Sbjct: 137 --SSLDPKVEFLLTIMSSMAQEEARNVSENVKWNVQRRFREGV---PIINHKRFLGYTKD 191 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 K V P+ + ++LIF L + IAK L + K +GK + W S I +L Sbjct: 192 KKGGNLVVVPEEAQIVKLIFNLYISGVGPAKIAKQLIEMGAKTGAGK-TEWRLSTITTIL 250 Query: 242 ANKALIGICVPSYR--------ARGKGISEIAGY-----YPRVISDDLFYAVQEIRLAPF 288 N+ +G + R K + Y + +I D F Q IR Sbjct: 251 KNEKYMGDMLQQKTISIDYLSHTRVKNKNHAPTYYTENSHEAIIDRDTFELAQRIRKDRA 310 Query: 289 GISNSSKNP----MLINLLRTVMKCEACGNTM---IVHAVSGSLHGYYVCPMRRLHR--C 339 + L ++ C CG T+ + S C + C Sbjct: 311 KVRIGEDKNLSKYSRTYPLTAMIICSECGRTLKRRYWNYGKPSQRVMQQCGSYIEGKANC 370 Query: 340 DRPSIKRDLVDYN---IINELLFNCSKIQP-----------VENKKDANETLELKIIELQ 385 + + +DL++ ++N++ I V++ + E L L+ E + Sbjct: 371 NAKASHQDLIEATTIHMLNKVFLKDLDIMSTIQRIIKSTIKVDDVQGIIEKLTLERDENE 430 Query: 386 MKINNLIVALSVAPEVTA--IAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAID 440 + ++NLI P++ K R L+ + + L+ + V ++ +D Sbjct: 431 IALSNLIDTKVKTPDIPESIFNTKYREYSDRLKVLTAEINKLELEHVKNYDTRKRMD 487 >UniRef50_C6JGM9 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGM9_9FIRM Length = 557 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 102/540 (18%), Positives = 193/540 (35%), Gaps = 84/540 (15%) Query: 1 MKK----AIAYMRFSSPG--QMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFK 54 MKK A Y+R S + +S+ Q LI ++K SD + T++D G F Sbjct: 13 MKKNIWIAAKYLRLSIEDGDKAESESIVNQSILIDNYMKSTSDITIVE-TFKDDG---FS 68 Query: 55 GKHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITL 114 G F L AIE+ I ++V+ L R RE + K+ G+ I + Sbjct: 69 GTDFNRPGFQAMLKAIENKEI---NCIIVKDLSRFGREHIDVDRYIQKVFPQLGVRFIAI 125 Query: 115 CDNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASC 174 DN Y+ ++ N + + + + + S +V+ KR G ++ Sbjct: 126 NDN--YDSETANITDTHLVLPVKSFVNDTYCRQNSQKVRSHLSAKRNIGEYVGNYVSY-- 181 Query: 175 PRWLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHA------VKNFSG- 227 + D ++ DP K + IF +ME S IA LN+ K +G Sbjct: 182 -GYKKCDTDKSQIEIDPVAAKHVRDIFTWKMEGMSNQLIADKLNELGVLAPADYKRATGV 240 Query: 228 ---------KESAWGPSVIEKLLANKALIGICVPSYRARGKGISEI------------AG 266 S W I ++L N G+ R ++ Sbjct: 241 NFKSSFQTHLTSRWSAVAIIRILKNPIYYGVLQQGKSQRINYKVKVQRALPKEEWVIFEN 300 Query: 267 YYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAV--SGS 324 ++ +++ + + VQ + I+ + L ++ C CG+ +I G Sbjct: 301 HHEGIVTKEEYETVQMLLAKDTRIAPGE---NRLYLFGGLLSCGDCGSNLIRRTNSYKGE 357 Query: 325 LHGYYVCPMRRLHR--CDRPSIKRDLVDYNIINELLFNCSKIQPV--------ENKKDAN 374 +Y+C + C R SI+ D++ +++ L + EN D Sbjct: 358 KTVFYICSSYNKKKDQCSRHSIREDVLIQLVMDSLKMYSKMTDAIRSAVEYLKENSLDTQ 417 Query: 375 ETLELK--IIELQMKIN-----------NLIVALSVAPEVTAIAEKIRLLDKELRRASVS 421 ++ I+EL+ K+N NL + + T + E+ E++ + Sbjct: 418 TLIQHDDLILELRNKVNKYYKLLHSLSGNLASGVISKDDYTLLRER---YQTEIKSLESN 474 Query: 422 LKTLKSKGVNSFSDFYAID------LTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFM 475 ++ + + + + L + +L R + + EKI + + K +I + Sbjct: 475 IEKQEEYMEDLLENKLLCEEWVNTFLEKPSLGDLDRDMLLQYVEKINVF-EGKKIEIVYR 533 >UniRef50_A0Q362 Site-specific recombinase, resolvase family, putative n=2 Tax=Clostridium RepID=A0Q362_CLONN Length = 524 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 102/526 (19%), Positives = 184/526 (34%), Gaps = 76/526 (14%) Query: 1 MKKA---IAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNS-----DYYLDTITYEDLGLSA 52 MKK Y R S+ + +S+ Q + + +W+ + D Y YED G Sbjct: 1 MKKVWNVAIYARVSTDKKEQSESIPAQIQGLKKWIMEKNKSGKEDIYNLKEVYEDYG--- 57 Query: 53 FKGKHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVI 112 F G + +F + + I+ G I +L L R +R + G+ + Sbjct: 58 FSGSNFNRKSFIKMKEDIDCGKI---NMVLTRDLSRFARNYIVAGYYLEDYFKEKGVRFV 114 Query: 113 TLCDNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTA 172 ++ DN +D++NE ++ I + K +R L + R ++ S Sbjct: 115 SVLDN----VDTINEVDDIVPFKNILNEMYIKDCSKRTRDGLRQRMIRGSSIASKPPYGY 170 Query: 173 SCPRWLSLDDKRTAFVPDPDR-VKTIELIFKLRMERRSLNAIAKYLNDHAVKNFS----- 226 + K VP D + IF L ++ + IA YLN+ ++ S Sbjct: 171 KFETTYEGEIKSIKLVPKEDETTDIVREIFSLYIQGYGMGKIATYLNNKGIEPPSANVKN 230 Query: 227 ---GKESAWGPSVIEKLLANKALIGICVPSYRAR-----------GKGISEIAGYYPRVI 272 GK W + I +L N GI V + K I + +I Sbjct: 231 ATKGKSKKWSGNTIRYILTNPKYAGIMVQGRWKKVSYKIKKVKITSKDQWIIGKEFKGII 290 Query: 273 SDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCP 332 S F VQEI ++L V+KC C +M Y C Sbjct: 291 SKKTFKKVQEIINERRKKFRHKDGN--VHLFSGVLKCNECKGSMSYRTKFKG----YKCT 344 Query: 333 M--RRLHRCDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANET-------LELKIIE 383 R +C SIK + + I+N+L + +I +E + E K+ Sbjct: 345 NSQRGGGKCTAHSIKEEYLKTAILNDLRRHVLEINDMEEVYELLREKIKGDNNYEKKLEC 404 Query: 384 LQMKINNLIVALSV---------------APEVTAIAEKIRLLDKELRRASVSLKT---- 424 L +++ L + VT I +K + + + +++ Sbjct: 405 LNKQLDKLDGKIQKIYNDKLNGAINYRNFTMLVTIIEQKQENIINKKNKLINKIESNDFK 464 Query: 425 -LKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKT 469 + + N + +F L+ K+ L R + ++I+++ D + Sbjct: 465 VQEQEIYNYYKNFIDEILSFKD---LDRFILENLVDRIVVSEDKER 507 >UniRef50_Q1VBK2 Resolvase-like:Recombinase protein n=1 Tax=Vibrio alginolyticus 12G01 RepID=Q1VBK2_VIBAL Length = 545 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 113/508 (22%), Positives = 194/508 (38%), Gaps = 58/508 (11%) Query: 1 MKKAIAYMRFSSPGQMS-GDSLNRQRRLIAEWLKVNSDYYLDT--------ITYEDLGLS 51 M K Y R S Q G + RQ + W+ + L + YED G S Sbjct: 1 MNKYHLYQRVSKQIQAEEGQGIQRQEQACEHWISDYNKRLLSEGKSAYSKGLIYEDRGKS 60 Query: 52 AFKGKHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDV 111 A+ + + G ++ IE+G I G +++E +DR SR V + + I++ G+ + Sbjct: 61 AYTAANFKRGELGALINDIENGKIEKGDLIVIELIDRFSRANVDFVRSQFQRIIDAGVKI 120 Query: 112 ITLCDNTVY--NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTI 169 N V+ N++S++ I + A +ES KSSR+K S R+ +SG Sbjct: 121 AITKWNLVFEENMESVSSVTGRILLEIGMYLAYQESSQKSSRIKAS----RKLLEDSGRK 176 Query: 170 MTASCPRWLSLDDKRTAFVPDPDRVKTIELIFKLRME-RRSLNAIAKYLNDHAVKNFSGK 228 A P WL+ + ++ + + I IF L++ I K L D + +S Sbjct: 177 SIAKPPFWLARNSDLKSYTIIEENAEIIRKIFYLKLNFNYGPQKIIKSLGDLDIYRYSFD 236 Query: 229 ESAWGPSVIEKLLANKALIGICVPSYRARGKGISEIAG--YYPRVISDDLFYAVQEIRLA 286 E+ + K N L + +Y I ++ G YYPR+I D FYAVQ Sbjct: 237 ENG----NLIKTTKNSPLSESSINAYIRNTNVIGKLDGKDYYPRIIDDRTFYAVQ----K 288 Query: 287 PFGISNSSKNPMLINLLRTVMKCEA---------CGN--------TMIVHAVSGSLHG-Y 328 + + N+ V KC CG+ V G Y Sbjct: 289 RTRENTGGVGEIFRNVFVGVGKCGCLIRKENENGCGSLAKCGYIMAFSSRKVKNPTKGMY 348 Query: 329 YVCPMRRLH-RCDRPSIKRDLVD---YNIINELLFNCSKIQPVENKKDANETLELKIIEL 384 C +R +CD +I L YN++ L F+ + + + LE KI + Sbjct: 349 LKCNRKRKSTKCDSENINYYLAQNKIYNVLKSLKFDIDQSVDISH-------LEEKINTI 401 Query: 385 QMKINNLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSK 444 ++ + ++ + + ++ E + +K KS+ S+ ID + + Sbjct: 402 DKSMSKIREYMTQYSDDEEWENQYKIKRMEREKIENEIKASKSRITGKLSNL-DIDFSKE 460 Query: 445 NGRELCRTLAYKTFEKIIINTDNKTCDI 472 R L +I + + +I Sbjct: 461 KDRVLFNQFLKD--NRITVYFTKERMEI 486 >UniRef50_D0LPM7 Resolvase domain protein n=2 Tax=Haliangium ochraceum DSM 14365 RepID=D0LPM7_HALO1 Length = 525 Score = 223 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 87/519 (16%), Positives = 171/519 (32%), Gaps = 68/519 (13%) Query: 2 KKAIAYMRFSSPGQMSGD--SLNRQRRLIAEWL--KVNSDYYLDTITYEDLGLSAFKGKH 57 K+ Y R S+ + + +L+ QR ++ + + + Y+D G F G + Sbjct: 9 KRCAIYTRKSTEEGLEQEFNTLDAQRDAGEAYIASQQHEGWVCLPERYDDGG---FSGAN 65 Query: 58 AQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDN 117 + A L IE G + +++ +DRLSR + A + +++ H + +++ Sbjct: 66 TERPALQRLLADIERGRV---DAVVIYKVDRLSRSLLDFA-KLMEVFDRHEVAFVSVTQ- 120 Query: 118 TVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRW 177 ++ LI +L+ A E E+ + R + R+ SG P Sbjct: 121 ---QFNTATSMGRLILNVLL-SFAQFEREMIAERTRDKIAAARKKGRWSG----GMPPLG 172 Query: 178 LSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESA------ 231 + V + + IF+L + +SL A+ LN + Sbjct: 173 YEVAPGGGKLVVHAEEAAQVREIFRLYVREQSLLTTAQELNRRGWRTKQWTTKKGRRRGG 232 Query: 232 --WGPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFG 289 W S + ++L + +G A G + +I F + + Sbjct: 233 VLWDKSRVHRILTSVVYLGQVTYKGTAY-------DGVHEPLIDAATFERARTLLEEGRV 285 Query: 290 ISNSSKNPMLINLLRTVMKCEACGNTM--IVHAVSGSLHGYYVCPMRRLHR---CDRPSI 344 +S+ LLR +++C AC M G ++ YY C H C +I Sbjct: 286 AGSSALRNRHGFLLRGMLRCGACATGMSASWTTRRGKVYRYYRCDSTVRHGTGACPVGAI 345 Query: 345 KRDLVDYNIINELLFNCSKIQPVENKKDANETL-----------ELKIIEL----QMKIN 389 + ++ I+ + + + +E E +I + + Sbjct: 346 SAEAIEQFIVARVRDAATAPEVIEQALAQVAEDRAARRDALAREEQQIGAAYRRCREEAG 405 Query: 390 NLIVALSV--------APE-VTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAID 440 NL+ AL+ APE + + + L L L+ V A+ Sbjct: 406 NLLDALAQPGASGGRFAPERLGELETQAAQLQARRAEVCGELAALQGADVGKQEVRAALA 465 Query: 441 LTSKN----GRELCRTLAYKTFEKIIINTDNKTCDIYFM 475 L G + E++ + + F Sbjct: 466 LFEPVWDVLGATERARIVRLLLEEVRYDGAGGEVTLSFY 504 >UniRef50_A5FQB3 Resolvase, N-terminal domain n=6 Tax=Dehalococcoides RepID=A5FQB3_DEHSB Length = 504 Score = 223 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 93/462 (20%), Positives = 166/462 (35%), Gaps = 58/462 (12%) Query: 3 KAIAYMRFSSPGQMS-GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 KA Y R S+ GQ G SL Q ++ +V Y Y + A+ G + Sbjct: 2 KAAIYCRVSTEGQEQDGTSLQTQLEACLKYCQVKG--YEVKYQYSE----AWSGLSLERP 55 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 +E +A+ I ++V SLDR SR+ V I ++ + + + + + Sbjct: 56 RLAELREAVRSQAIE---VVVVYSLDRFSRDPVHGVI-LMQELEKNEVALEAATETVD-- 109 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIM--TASCPRWLS 179 N + + A ++ + R + + + ++ L++G + T Sbjct: 110 ----NSEVGKLVFYIKGYAA----KLDAERRRDATGRGKRALLKNGKMPQGTGVGIYGYK 161 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEK 239 D +P K ++ +F++ +S IAK LND +V +GK W + + Sbjct: 162 WDSASKKRIPLAHESKVVKHMFEMAASGKSCFDIAKTLNDSSVPTKTGK--KWEARTVSR 219 Query: 240 LLANKALIGICVPSYRARGKGISEIAGYY-------PRVISDDLFYAVQEIRLAPFGISN 292 LL NKA GI + P VIS +LF Q + + Sbjct: 220 LLTNKAYTGITYFGRTTGKDHKKTNEDTWHVLTDVTPAVISQELFERAQSALAKLRELHS 279 Query: 293 SSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVC-----PMRRLHRCDRPSIKRD 347 L C CG+ ++ + + G+ + YY C R CD I+ D Sbjct: 280 GK--AKHEYPLTGFAVCGKCGSPLVGNCLRGN-YRYYHCRGTYPTASRAKICDAHYIRAD 336 Query: 348 LVDYNI---INELLFNCSKIQ-----PVENKKDANE--TLELKIIELQMKINNLIVALSV 397 ++ + + +L + VEN+K T++ +I EL ++ Sbjct: 337 WLEEVVWDKVKSILSQPELLLAEVGKQVENEKAHYSTGTMDKEIKELSRRLKGYAGQERR 396 Query: 398 APEV--------TAIAEKIRLLDKELRRASVSLKTLKSKGVN 431 + + ++I L+ KE V L L N Sbjct: 397 LMNILRMDLATPDIVLDEINLMKKEREADQVRLNGLIQAKEN 438 >UniRef50_B0MRT0 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MRT0_9FIRM Length = 520 Score = 223 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 94/451 (20%), Positives = 167/451 (37%), Gaps = 49/451 (10%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 +A AY R S+ SL QR ++++ NSD + D G S + Sbjct: 5 RAAAYCRVSTDRAEQSGSLASQRSFFDDYIR-NSDSMTLVGVFYDEGTSGTTTLN--RYG 61 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F++ + G I +L + + R +R V + + +++ G+ +I + DN I Sbjct: 62 FNKMISLAVSGGI---DIILTKEVSRFARNTV-DTLNITRMLRAKGVGIIFINDN----I 113 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 D+ + L +I+ A A EES S RVK ++K +E G + SC L D Sbjct: 114 DTRDSDGELRLSIM-ATIAQEESRKISERVKWGQQRK----MEQGVVFGRSC---LGYDV 165 Query: 183 KRTAFVPDPDRVKTIELIF-KLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 K + D + ++ IF + + + +IA LN ++ +G W + I K+L Sbjct: 166 KDGKITVNADSAEIVKRIFTEYTVLLKGAESIADGLNAEQIRTVNG--GRWSGAFIRKVL 223 Query: 242 ANKALIG------ICVPSYRARGKGISE-----IAGYYPRVISDDLFYAVQEIRLAPFGI 290 N +G C P + K ++ I ++ +IS +L+ Q Sbjct: 224 RNVKYVGDLEQKKTCTPDFLTHKKRLNSSEHIYIRNHHEPIISRELWEQTQAEISRRKPT 283 Query: 291 SNSSKNPMLINLLRTVMKCEACGNTMIVHA---VSGSLHGYYVCPMRRLHR-CDRP---- 342 S + + + C CG+ M+ +G ++ C R + C+ Sbjct: 284 DTSRHSDR--YVFSGKVYCGVCGSVMVSRVKTLKNGKIYHALRCSGRIGGKSCNNETLNV 341 Query: 343 -----SIKRDLVDYNIINELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVA-LS 396 +KR D I + N K L KI L K + L Sbjct: 342 TALKACVKRIFTDIPIDKTSVINAVIKGLSRTDKPDIPALRRKIETLNAKKRRAVDLMLD 401 Query: 397 VAPEVTAIAEKIRLLDKELRRASVSLKTLKS 427 + E+ D + + S + + +S Sbjct: 402 GLITQQELIEQKSYYDSIIEKLSQEISSDRS 432 >UniRef50_A5N4T4 Putative uncharacterized protein n=7 Tax=Bacteria RepID=A5N4T4_CLOK5 Length = 559 Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 92/538 (17%), Positives = 187/538 (34%), Gaps = 80/538 (14%) Query: 5 IAYMRFSSP----GQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 Y+R S G+ +S+ Q++L+ ++ + + D + TY D G G Sbjct: 26 AKYIRLSKEDLNRGKDDSNSVTNQKKLLDDYYRQHLDEFESAETYVDDGC---TGTDTNR 82 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 F L I + ++V+ L RLSR L + + I+L + Sbjct: 83 ADFQRLLADIYAKKV---NCVIVKDLSRLSRNYTDAGSLIENLFVQMNVRFISLAEGVDS 139 Query: 121 --NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWL 178 N DS++ I ++ Q + S +++ + K++ +G + + P Sbjct: 140 YLNPDSVSSILVPITNVMNDQYCYQ----TSKKIRQVFDYKKR----NGEFIGSYAPYGY 191 Query: 179 SLD-DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHA--------------VK 223 D + + A + D + + ++ IF + + ++ AI +LNDH K Sbjct: 192 IKDPNDKHALLVDHEAAEVVKQIFSMCLSGMTVRAIVNHLNDHGVMCPSVYKQSQGLKYK 251 Query: 224 NFSGKESA-WGPSVIEKLLANKALIGIC------VPSYRARG------KGISEIAGYYPR 270 +G+ W I +L N +G V SY+ K + + Sbjct: 252 CPNGQTQPMWSTITISNMLKNPVYVGDMAQGRNRVKSYKIHKIEAVPEKDWIVVPNTHEP 311 Query: 271 VISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYV 330 +I + F V+++ S K + L ++C CG M S L+ YY Sbjct: 312 IIDREAFEKVKQLLKRDTRTSPKQK---QLYLFSGFLRCADCGRAMS-RIASKELYVYYQ 367 Query: 331 CPMRR---LHRCDRPSIKRDLVDYNIIN------ELLFNCSKIQPVENKKDANETLELKI 381 C + C SIK ++ ++ L + S I N ++ +++ Sbjct: 368 CGTYKSLSKKACTMHSIKSTRLEAAVLYAIRQQVHLAVSYSAIVSKINLAPLKKSQSIRL 427 Query: 382 IEL----QMKINNLIVALSVA--------PEVTAIAEKIRLLDKELRRASVSLKTLKSK- 428 EL + ++ ++ +++ + LK + Sbjct: 428 NELITAKEKELTKIMRYKQALYQDWKDGHITHNDYRHMSEDYEQQNEAIGTVIANLKKER 487 Query: 429 -----GVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFK 481 G+++ + F A +N +L R + + + I + + I F + Sbjct: 488 DELENGIDTENPFLATFRKYENIDKLTREILIELVDHIKVY-EGGDISIRFKFADELR 544 >UniRef50_B0P747 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B0P747_9FIRM Length = 511 Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 73/395 (18%), Positives = 131/395 (33%), Gaps = 55/395 (13%) Query: 3 KAIAYMRFSS---PGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 K Y R S G +S+ QR L+ E+ + Y D + G Sbjct: 2 KCAVYCRLSREDGDGTRESESIQNQRALLTEYAAERG--WEVYAAYCDDD---YSGADRA 56 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 AF+ L +L ++ R +R+ L GI I + D+ Sbjct: 57 RPAFNRMLRDARDQKFE---IILCKTQSRFTRDLELVEKYIHGLFPVWGIRFIAVVDHVD 113 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 + + + + E S ++ + +KR+ +G + + Sbjct: 114 TALRGSKKARQINGLVN-----EWYLEDLSENIRAVFAQKRR----AGQYIGSFPAYGYE 164 Query: 180 LDD-KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFS------------ 226 D V D +T+ LIF L + IA LN + N + Sbjct: 165 KDPADHNHLVIDAQAAETVRLIFSLCLSGMGKQKIAAELNRRGILNPTAYKRARGWICPG 224 Query: 227 GKESAWGPSVIEKLLANKALIGICVPSYRAR------------GKGISEIAGYYPRVISD 274 GK + W + + ++L N+ G V + + + + G + +I Sbjct: 225 GKSALWSHATVGRILHNELYTGTMVQGVKHKISYKSNLCVSVPREAWIRVPGTHEAIIDP 284 Query: 275 DLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTM--IVHAVSGSLHGYYVC- 331 +F VQ + S + + L +++C ACG +M + H G Y C Sbjct: 285 QVFQTVQSVLARRTRSDGSGQT----HPLAGLVRCGACGASMIRVSHTYKGKKRSYLQCG 340 Query: 332 ---PMRRLHRCDRPSIKRDLVDYNIINELLFNCSK 363 R C R SI+ D++ + EL ++ Sbjct: 341 RYASDRAGALCTRHSIRLDILTDAVKRELREQIAR 375 >UniRef50_Q7U6I7 Partial homology to phage recombinase n=1 Tax=Synechococcus sp. WH 8102 RepID=Q7U6I7_SYNPX Length = 667 Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats. Identities = 108/530 (20%), Positives = 201/530 (37%), Gaps = 53/530 (10%) Query: 2 KKAIAYMRFSSPGQMSGD--SLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 K AI+Y R S+ Q D RQ+R I WL + DY LD +S A+ Sbjct: 20 KVAISYSRVSTGKQSGEDRSGEERQQRAIESWLSEHPDYSLDREIRV--TVSG-----AK 72 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDN-- 117 +G F F+ +E G + GT L+VE + R SRE + ++ L + + G + Sbjct: 73 AGRFEWFISELEKGVLPRGTCLVVEKVSRFSREPIEAVLKTLLRLWDAGGAIAFCELGGK 132 Query: 118 --TVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASC- 174 + + DS + Y ++ AI QRA E + R + +K+R + A Sbjct: 133 VLSCFEQDS-GDAYVVLGAI---QRARGEWLERQDRSLAARRKERDLHKQGTHKPKARTK 188 Query: 175 ------PRWLSLDDKRTAFVPDPDRVKTI-ELIFKLRMERRSLNAIAKYLNDHAVKNFSG 227 P WL + D VKTI L KL + IA +L+ +K S Sbjct: 189 RGRADYPFWLDVKDGEYVLNDWATHVKTIFSLAPKL-----GITRIANHLDSQGIKAVSD 243 Query: 228 KESAWGPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAP 287 W P+ + +L N+A +G V + K E YP V++ + + A Q + Sbjct: 244 GRRRWTPNSVSGVLRNEAALGYKV--FWKDNKPSDEKVVCYPPVVTQEEWDAAQMGLSSR 301 Query: 288 FGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRD 347 S+ +P NL + C CG+ M+V + C C + K Sbjct: 302 SQSRPSNNSPTQQNLFAGSIYCRHCGSPMVVKNAGNGQK-FLRCRND-FSICTQRGHKY- 358 Query: 348 LVDYNIINELL-FNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSV--------- 397 ++ ++N L + + ++ A + ++E + + ++ ++ Sbjct: 359 -LEAFLLNHLAQYRWEEFFNAGVQEAALTSARSSLLEAEKTLRSIQEDVAKVNSNITKLT 417 Query: 398 APEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKT 457 + + + ++L + ++ + ++ + + GRE R L + Sbjct: 418 TSDSPELLRVLPQFSRQLDKLLADQNVAQAAVDDVRAEVNKL-THQQTGREAERALKRQI 476 Query: 458 FEKIIINTDNKTCDIYFMNGIVFKHYPLMKVISAQQAISALKYMVDGEIY 507 I + ++ + + + L+ + AI+ L D E++ Sbjct: 477 DGFI--SGEDNSLEQRVSFNTWLREQKLVLCLEDGHAIAEL----DDEVF 520 >UniRef50_UPI0001C3729C phage integrase family site specific recombinase n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C3729C Length = 517 Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats. Identities = 97/512 (18%), Positives = 188/512 (36%), Gaps = 58/512 (11%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 + AY R S+ S Q E + N D+ I + D G+SA K Sbjct: 26 RVAAYCRVSTDFDEQATSYQTQIEHYEEVINKNPDWIFAGI-FADDGISATSTKG--REQ 82 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F+ + A G I ++ +S+ R +R V + + ++ + I + + +I Sbjct: 83 FNNMIQACHDGKI---DMIITKSISRFARNTV-DCLNYIRELKGLNIPIYFEKE----SI 134 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 ++++ ++ I+ A A +ESE S VKL + + Q G +M + + Sbjct: 135 NTMDAKGEVLITIM-ASLAQQESESLSQNVKLGIQYRFQQ----GKVMVNANSFLGYDKN 189 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 + + +P+ +T++ IF+ +E S IA+ L V G W S I+++L Sbjct: 190 EDGQLIINPEEAETVKRIFREYLEGSSCKQIAQGLERDGVLTARG-SKRWHDSCIKRILE 248 Query: 243 NKALIG----------ICVPSYRARGKGISE---IAGYYPRVISDDLFYAVQEIRLAPFG 289 N+ +G + R R G + + +I +LF QE Sbjct: 249 NEKYMGDALLQKTYTVDFLKKKRVRNNGDVPQYYVEDDHEPIIPKELFLKTQEEMSRRGK 308 Query: 290 IS---NSSKNPMLINLLRTVMKCEACGNTMIVH--AVSGSLHGYYVCPMRRLHR--CDRP 342 ++ ++ ++ C CG+ G + C R + C Sbjct: 309 YVDCLGRNRAFSSMHCFSGLIYCSECGSLYRRIHWNNRGRKVHVWRCITRLENSTECRAR 368 Query: 343 SIKRDLVDYNI---INELLFNCSKIQPVENKK----------DANETLELKIIELQMKIN 389 ++ + + +N+L+ V K D+ E+++ +I ELQ +I Sbjct: 369 TVNENALTNAFVIAVNKLIATNDSYIEVLQKNIATVIETADPDSGESIQARIDELQQQI- 427 Query: 390 NLIVALSVAPEVTAIAEKIRLLDKELRRAS-VSLKTLKSKGVNSFSDFYAIDLTSKNGRE 448 + + A A++I L ++ AS + + + + F I + Sbjct: 428 --LEKSDRNEDFEAEAQEILRLRQQKGNASPNDISSEDMERIRKLQTF--ITKMPSAILD 483 Query: 449 LCRTLAYKTFEKIIINTDNKTCDIYFMNGIVF 480 +L EKI + D + F +GI Sbjct: 484 FDESLVKHLLEKITVFEDK--LEFEFKSGITI 513 >UniRef50_Q1J4R9 Site-specific recombinase n=10 Tax=Bacteria RepID=Q1J4R9_STRPF Length = 557 Score = 221 bits (562), Expect = 6e-56, Method: Composition-based stats. Identities = 111/529 (20%), Positives = 202/529 (38%), Gaps = 78/529 (14%) Query: 2 KKAIAYMRFSSPGQM--SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 K A Y+R S +S++ QR++I + + N + Y D G F G + Sbjct: 4 KFACMYLRLSREDGDSTESNSISNQRQIIKSYARDND--FKVVAEYVDDG---FSGSNFD 58 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 F + + +E T++V+ L R R+ + K+ GI I++ DN Sbjct: 59 RPKFKKMIQDLEEKKFK---TIIVKDLSRFGRDYIESGKYLQKIFPEKGIRFISVNDN-- 113 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIK--SSRVKLSWKKKRQDALESGTIMTASCPRW 177 DS N S IL + +S + S +VK S + KR+ +G + A P Sbjct: 114 --YDSENADVSDTHLILPIRNFINDSYCRDISMKVKSSKEIKRK----NGEFIGAFAPFG 167 Query: 178 LSLDDK-RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSG--------- 227 D K + V D + IE IF ++++ S AIA +LN S Sbjct: 168 YKKDSKNKHKLVVDTEVSHIIERIFNMKIDGYSSKAIADFLNSIGCVTPSKHKENSGDNH 227 Query: 228 ------KESAWGPSVIEKLLANKALIGICVPSYRARGKGISE------------IAGYYP 269 K+S W ++ +++ NK IG+ + S+ I + Sbjct: 228 TTGFIVKDSKWDAKMVNRIITNKVYIGVLEQGKTRKLNYKSKREVEVNEEDWIVINDSHK 287 Query: 270 RVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGS--LHG 327 +IS ++ ++ L S + ++L ++ C+ CG++M+ V + Sbjct: 288 PIISKSIYALANKMMLRDVKQS-----ADIPHILSGMLYCKDCGSSMVRRKVKSKNGYNI 342 Query: 328 YYVCP-MRRLHRCDRPSIKRDLV-DYNI--INELLFNCSKIQPVENKKDAN--------E 375 +Y+C C R SIK D + D + + + L +++ NK D + E Sbjct: 343 FYICSHYNNKGDCTRHSIKEDYLMDMTLFALKDYLKKYNELLSQVNKLDVSKVTFNIDFE 402 Query: 376 TLELKIIELQMKINNLIVALSVAPEVTAIAEK--------IRLLDKELRRASVSLKTLKS 427 +L + + + +L + L + E+ IR ++K++ L L+ Sbjct: 403 SLNSEKRKYERLRQSLYMDLEDELITSEEFERFRKNYLIKIREIEKQIATKKNILANLQE 462 Query: 428 KGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMN 476 K N D ++ + L R ++I I +N + F N Sbjct: 463 KMKN--KDSLVSEIVPTDLSSLNRLTIVSFIDRIEI-GENNEINFVFNN 508 >UniRef50_C0FPH2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0FPH2_9FIRM Length = 552 Score = 221 bits (562), Expect = 6e-56, Method: Composition-based stats. Identities = 89/528 (16%), Positives = 184/528 (34%), Gaps = 69/528 (13%) Query: 3 KAIAYMRFSSPGQ-MSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 +A Y+R S S+ Q+ +IA +L+ + + TY D G G + Sbjct: 22 RAAIYVRLSVEDTHTHSVSIETQQMIIARYLEQYPEISV-YDTYIDNGA---TGTNFHRP 77 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F + L IE G++ ++V+ L RL R + + I I + +N Sbjct: 78 GFQQMLSDIEAGHV---NCVIVKDLSRLGRNTIDTGYYIEQYFRIRNIRFIAVNENFDTA 134 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPR-WLSL 180 +I + A + + + +++ A++ G + A P +L Sbjct: 135 APEDAHSGIIIPLRNMINEAY------ALDIGRKIRAQQRQAMKDGKFIGARTPYGYLKA 188 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFS------GK------ 228 +D + DP ++ +F+ E LN IA LN+ + S GK Sbjct: 189 EDDCHQLIIDPVAAVVVQRMFRWASEGAGLNTIAVRLNEAGILTPSHYKKMQGKITHENL 248 Query: 229 --ESAWGPSVIEKLLANKALIGICVPSY---------RARGKGISEIAGYYPRVISDDLF 277 W + +L ++ G V +A + + + + +IS + F Sbjct: 249 LGSGKWQTRTVGVILRSEVYTGDLVQGQTKTVDHRQVKADAEEWTVVRDTHEAIISREQF 308 Query: 278 YAVQEIRLAPFGISNSSKNPMLI-NLLRTVMKCEACGNTMI----VHAVSGSLHGYYVCP 332 AVQEI + + + NLL+ + C CG ++ + S ++ Y+ Sbjct: 309 AAVQEILNQTASRAKAREVKAFTPNLLKGKVFCAHCGGSLHRQRNIRKKSDDVYFYHCLS 368 Query: 333 MRRLHR--CDRPSIKR------------DLVDYNIINELLFNCSKIQPVENKKDANETLE 378 R+ + C +I+ D +D + L + ++ + E + Sbjct: 369 QSRIRKDACPGVTIREDALLDMLADMLQDALDTALGQYTLSLAELPRQAADRAELREKIT 428 Query: 379 LKIIELQMKINNLIVAL-----SVAPEVTAIAEKIRLLDKELRRASVSLKTLK---SKGV 430 + E+Q ++ ++ +L + + + +V ++ L+ Sbjct: 429 SRKQEIQ-RLRGIVRSLYENLVQGVLTKDEYFDYKEKYESRIADLAVEMEQLEDGLRTMD 487 Query: 431 NSFSDFYAIDLT---SKNGRELCRTLAYKTFEKIIINTDNKTCDIYFM 475 A++ K R L L + ++I ++ D + Y Sbjct: 488 TQLEQHRALEQDAAQIKTDRALTGALIERLIDRIEVSHDKQITVRYRF 535 >UniRef50_D0LLL4 Resolvase domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LLL4_HALO1 Length = 525 Score = 220 bits (561), Expect = 8e-56, Method: Composition-based stats. Identities = 86/506 (16%), Positives = 175/506 (34%), Gaps = 69/506 (13%) Query: 3 KAIAYMRFSSPG--QMSGDSLNRQRRLIAEWLK--VNSDYYLDTITYEDLGLSAFKGKHA 58 + Y R S+ M ++L+ QR +++ + + L Y+D G F G + Sbjct: 11 RCAIYTRKSTSENLDMDFNTLDAQREAGEIFVQSQAHQGWELLPEHYDDGG---FTGGNM 67 Query: 59 QSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNT 118 + A L IE I ++V +DRLSR + A ++ G+ ++ Sbjct: 68 ERPALQRLLADIEADKI---DCVVVYKVDRLSRSLLDFA-RMIQAFEKQGVSFVSTTQQF 123 Query: 119 VYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWL 178 P + L+ A E E+ S R + R+ G + Sbjct: 124 NTAT-----PIGRLTLHLLLSFAQFEREMISERTRDKMAAARRR----GKWVGGPPVLGY 174 Query: 179 SLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHA--VKNFSGKESAW---- 232 ++D P+ + + F + + RS+ A+ + + K + + W Sbjct: 175 AIDRDLRRLEVVPEEAEQVRAFFGMYLRMRSVGAVTRQADAFGWRKKRYQTRAGKWVGGG 234 Query: 233 --GPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGI 290 + + ++L N+ G V G + ++ D++F VQ I Sbjct: 235 RLDENAVHRVLRNRTYTGCVVYKGEVHA-------GEHDAIVGDEIFAQVQAILDTKRCG 287 Query: 291 SNSSKNPMLINLLRTVMKCEACGNTMI---VHAVSGSLHGYYVC---PMRRLHRCDRPSI 344 + +L+ V+ C CG+ M SG+++ YY C R + C P + Sbjct: 288 RGPRRQRNFAYILQGVLFCA-CGSRMTTVNGTGRSGTVYRYYRCLAQTKRPTNGCSHPRV 346 Query: 345 KRDLVDYNIINELLFNCSKIQPVEN--------KKDANETLELKIIELQMKINNLIVA-- 394 ++ I+ +L C+ + K+ +++ L + +Q ++ L Sbjct: 347 PAAEIEPVIVEKLRELCNDAAVSDEVARRLRGGKEQSSQALTNERAVVQSYLDELNTEAR 406 Query: 395 -------LSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGR 447 S A++E++ ++ + + L L + L GR Sbjct: 407 ELLGFARASEGKASRAVSERLSEIELQRDAERLRLAELDERLRG---------LNEAVGR 457 Query: 448 ELCRTLAYKTFEKI-IINTDNKTCDI 472 + F +I + + CD+ Sbjct: 458 VEAALDLLRGFSEIWEMLVPEERCDV 483 >UniRef50_C8WS87 Resolvase domain protein n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WS87_ALIAD Length = 475 Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats. Identities = 76/457 (16%), Positives = 158/457 (34%), Gaps = 63/457 (13%) Query: 4 AIAYMRFSSPGQMS-GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 Y R S+ Q G S++ Q+ + + K + Y D G + G + A Sbjct: 3 VALYCRVSTDEQAEHGFSIDNQKERLIAFCKSQG--WDQYRLYIDDG---YTGTNMDRPA 57 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 + I+ I T++V LDRLSR++ + + + + + Sbjct: 58 LQRLIKHIKEKKI---DTVIVYKLDRLSRKQRDVLYLLEDVFDKNNVVFKSATEPF---- 110 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 D+ + IL A A E + R+ K + ++SG P + Sbjct: 111 DTSTPLGKAMLGIL-AVFAQLERDTIIERLSTGQKLR----VKSGKFSGGRIPFGYVYNS 165 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 + F P + ++K ++ SL+ ++ ++ W + I +L Sbjct: 166 QTGKFEVSPHEAFLVREVYKKYLQGYSLSDLSDWIESQ------TSARYWDHARIRDMLT 219 Query: 243 NKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINL 302 + G+ + P +I +L+ VQ+ + P L Sbjct: 220 RETYTGVMPYGTLRSTEIA-------PPIIERELWEQVQQEMVRR----REGFTPKGEYL 268 Query: 303 LRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLH-------------RCDRPSIKRDLV 349 L +++C CG++ I + YY+ R H C R+ + Sbjct: 269 LSGLLRCAECGSSFIHVIRKKGPYVYYLYGCRSQHQRPKKVPRRAPKQACTVGYRNREEL 328 Query: 350 DYNIINELLFNCSKIQPVE-------------NKKDANETLELKIIELQMKINNLIVALS 396 + +I + + +++ E +D L + +++ K+N A Sbjct: 329 ESWVIEQ-VKRIARLDAEEFEHQIANIETNSDETEDTLRDLRKNLSDIEHKLNRWYEAFE 387 Query: 397 VA-PEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNS 432 + T + ++I+ L++E RR +++ L+ V Sbjct: 388 EGTIDATQLRDRIKHLEEERRRLQTNIEELQDTLVKD 424 >UniRef50_B3Z2D3 Cassette chromosome recombinase B n=2 Tax=Bacillus cereus group RepID=B3Z2D3_BACCE Length = 467 Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats. Identities = 93/478 (19%), Positives = 184/478 (38%), Gaps = 46/478 (9%) Query: 3 KAIAYMRFSSPGQ-MSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 K + Y R S+ Q G SL+ QR + ++ K ++ Y D G SA K+ + Sbjct: 2 KCVIYRRVSTDMQVEEGISLDMQRLRLEQYAKSQG--WVVVNDYCDEGYSA---KNTERP 56 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 AF + + ++ +LV LDR +R V + LK++ + + + + Sbjct: 57 AFQQMIKDMKKKQF---DIILVYRLDRFTRS-VSDLHSILKMMDEYNVKFKSSTE----I 108 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 D+ + L+A A E E + RV+ S KK + L +G A P D Sbjct: 109 FDTTTATGRMFIT-LVATLAQWERETTAERVRDSMHKKAELGLRNG----AKAPMGY--D 161 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 K+ + + ++ IF++ + + + +I K LN VK GK + + ++ Sbjct: 162 VKKGNLYINHTEAEIVKYIFEMY-KTKGVISIVKSLNSRGVKTKRGK--TFNYDAVRYII 218 Query: 242 ANKALIGICVPSYRARGKGISEIAGY-YPRVISDDLFYAVQEIRLAPFGISNSSKNPMLI 300 N IG +++IA + I D +Y VQ+++ + +N Sbjct: 219 NNPIYIGKIRWG----DDILTDIAQKDFETFIDKDTWYTVQQVQDSRKIGKVRLQN---F 271 Query: 301 NLLRTVMKCEACGNTMI----VHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINE 356 + V++C CG + V A + + GY CD P + D+++ +N Sbjct: 272 FVFSNVLRCSRCGKHFLGSKQVRAHNRIVMGYRCSSRHHKGTCDMPQVPEDVLEKEFLNL 331 Query: 357 LLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAP--------EVTAIAEKI 408 L ++ E K L+ + +Q K L ++ + ++ Sbjct: 332 LEDAIIDLEDTEEKPIELSNLQEQYNRIQDKKARLKYLFIEGDIPKNEYKKDMLTLTQEE 391 Query: 409 RLLDKELRRASVSLKTLKSKG-VNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINT 465 ++ K+L + + + K +N D + +L +++ + + +I Sbjct: 392 NIIQKQLANITDTASPFEIKELLNQLKDEW-YNLNNESKKAAVNAIVSSITVDVIKPA 448 >UniRef50_D1NLU0 Resolvase domain protein n=3 Tax=Clostridiales RepID=D1NLU0_CLOTM Length = 537 Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats. Identities = 103/530 (19%), Positives = 200/530 (37%), Gaps = 83/530 (15%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 K+ AY R S+ +S N Q++ E+++ N ++ L I Y D G++ + + Sbjct: 3 KRVCAYCRVSTDKDDQINSFNSQKQFFEEYIRKNEEWELVDI-YADEGITGTSTE--KRT 59 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F ++ +++ I +L + + R +R + ++I + + + G+ VI + D Sbjct: 60 EFLRMIEDVKYKKI---DLILTKEISRFARNTL-DSIYYTRKLKSMGVGVIFINDG---- 111 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 I++L+E L I+ A A EES S RVK K++ + + G + L + Sbjct: 112 INTLDEDAELRLTIM-ASIAQEESRRISQRVKWGQKRQMEKGVVFGREL-------LGYN 163 Query: 182 DKRTAFVPDPDRVKTIELIFKLR-MERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 + + + + +IF E + + IA+ L + +K G W ++I K+ Sbjct: 164 LRNGVLTINEQEAEIVRMIFHKFTNEGKGTHVIARELYEAGIKTKRG-NLNWSNTMILKV 222 Query: 241 LANKALIG----------ICVPSYRARGKGISE---IAGYYPRVISDDLFYAVQEIRLAP 287 L N+ +G + + KG E I ++ +IS +L+ A Q+ Sbjct: 223 LRNEKYVGDLCQKKTITPDFLSHKKKYNKGQEEMIYIKNHHEPIISRELWEATQKELEKR 282 Query: 288 FGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVS---GSLHGYYVCPMRRLH------- 337 + C CG+ + G + + C H Sbjct: 283 TTSREQKSKYSNRYWCSGKIICGLCGSRFVGRLKKLKNGDTYRAWRCQKAAEHGREKIDK 342 Query: 338 -----RCDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLEL--KIIELQMKINN 390 C++ SI + ++ E++ K V+NK++ L+ K E +KI N Sbjct: 343 WGNTIGCNQESIN-----HVVLGEIIGYILKNVIVDNKEEIINDLKALIKKYEKPVKIKN 397 Query: 391 LIVALSVAPEVTAIAEKI------------------RLLDKELRRASVSLKTLKSKGVNS 432 L + +K+ DKE+ +K ++ +N+ Sbjct: 398 TNTLLKQIENINTKKQKLIDSMLEGIISKQDVAMMNEKYDKEIEELRQKVKEIEEANINN 457 Query: 433 FSDFYAIDLTSKNGRELCR--------TLAYKTFEKIIINTDNKTCDIYF 474 + ++ + KT EKII++ D K +IYF Sbjct: 458 QKQADMLKSYIDRIHKIVNDLENNNPEEIYKKTVEKIIVHKD-KILEIYF 506 >UniRef50_C6P9P0 Recombinase n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6P9P0_CLOTS Length = 524 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 92/527 (17%), Positives = 178/527 (33%), Gaps = 75/527 (14%) Query: 4 AIAYMRFSSPGQMSG--DSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 Y R S G +S+ Q + + ++ N+ + Y D G+S + Sbjct: 13 CAIYCRLSKEDLSKGYSESIKTQEKELTRYVLENN--WNLVGVYIDDGVSGTT---FERD 67 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F +D +E G I ++ + L RL R+ + K+ +G+ I L D Sbjct: 68 DFKRMIDDVECGLI---NCIITKDLSRLGRDYIETGRYLEKVFPEYGVRYIALNDGVDTL 124 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 + + ++ A + S+ + K G + A P + D Sbjct: 125 KGE--DDSIPFRNVVNDMYAKDISKKIRFNLHSKMK--------EGLYIGAFAPYGYTKD 174 Query: 182 -DKRTAFVP-DPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKN----------FSGKE 229 D + VP + + ++ IF L E IAK L D S K Sbjct: 175 PDNKNRLVPANDITTQAVKRIFSLYTEGFGKQKIAKILTDEGYPTPAESKRNYANPSQKI 234 Query: 230 SAWGPSVIEKLLANKALIGICVPSYRARG------------KGISEIAGYYPRVISDDLF 277 W + + ++L N+ IG V R + + + + +I +++F Sbjct: 235 KMWNSNAVHRILTNEVYIGTVVQHKRKKVSYKVKKVKDVPEEEWIKKTHMHEPIIDENIF 294 Query: 278 YAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSL--HGYYVCPMRR 335 + VQ+I + + + +L KC CG+ M +C R Sbjct: 295 WQVQDIIQERAKLK--FRPGHVTHLFSGKAKCGDCGSYMGYFYDKDRKAPCWKLICGAFR 352 Query: 336 L---HRCDRPSIKRDLVDYNIINELLFNCSKI-QPVENKKDANETLELKIIELQ------ 385 C SI + + ++++L ++I E K A +++E K IE + Sbjct: 353 KYGSKACTMHSIPEEKLKQIVLDDLKSIANEIVDFNELTKIAEDSIEEKYIEQKKEYEEY 412 Query: 386 ----------------MKINNLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKG 429 KI LI + ++++ ++L + L + K Sbjct: 413 KKKYLEFQNTFKQMYYDKIKGLINEEQFKMLSDELQSEMKIYHEKLNKIEGQLNSNDVKA 472 Query: 430 VNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMN 476 + + I + ++L R + + + I DN+ Y + Sbjct: 473 ILIQQAYDKI-KNIIDMQDLTRQMIENLIDFVEIFKDNRIKIHYKFS 518 >UniRef50_C5VNM7 Site-specific recombinase, resolvase family n=1 Tax=Clostridium botulinum D str. 1873 RepID=C5VNM7_CLOBO Length = 528 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 108/531 (20%), Positives = 194/531 (36%), Gaps = 73/531 (13%) Query: 1 MKKA---IAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNS-----DYYLDTITYEDLGLSA 52 MKK Y R S+ + +S+ Q + + +WL S Y Y+D G Sbjct: 1 MKKVWNVAIYTRVSTDKKEQSESIPAQIQSLKKWLIEKSSNDKEQIYKLQQIYKDQG--- 57 Query: 53 FKGKHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVI 112 F G + + +F + IE+G I +L L R +R + N G+ + Sbjct: 58 FSGSNFKRESFIKMKKDIENGKI---NMVLTRDLSRFARNYITAGYYLEDYFKNKGVRFV 114 Query: 113 TLCDNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTA 172 ++ DN +D+++E ++ I + + +R L + R ++ S + Sbjct: 115 SVLDN----VDTIDEVDDIVPFKNILNEMYIKDCSRRTRDGLKQRMIRGSSIASRPLYGY 170 Query: 173 SCPRWLSLDDKRTAFVPDPDR-VKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSG---- 227 + K +P D K ++ IF+L ++ + IA YLND + S Sbjct: 171 KFHEVHDENVKIIKLIPREDETTKVVKKIFELYIQGFGMGRIATYLNDKGIAPPSALIKN 230 Query: 228 ----KESAWGPSVIEKLLANKALIGICVPSYRARG-----------KGISEIAGYYPRVI 272 K W + I +L N GI V + K I G + ++ Sbjct: 231 FSRSKFKLWNNNTIRSILTNPKYAGIMVQGRWRKVSYKINKVRPTPKDQWIIGGEFKGIV 290 Query: 273 SDDLFYAVQE-IRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVC 331 S + F VQE I+ G + N +L V+KC CG +M Y C Sbjct: 291 SKETFEIVQELIKKRSKGFRHKGGN---THLFSGVLKCNECGGSMSYRGDFKG----YKC 343 Query: 332 PMRRL--HRCDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLELKIIELQMKIN 389 ++ RC SIK + + I ++ N K+ +N + E K + + K+ Sbjct: 344 TNSQMGGGRCIAHSIKEEYLIKKIKEDIKRNIYKLNNKKNFYNLAELKVKKNSDYKRKLK 403 Query: 390 NLIVALSVAPE----------VTAIAEK-IRLLDKELRRASVSLKTLKSKGVNSFSDF-- 436 ++ L + I E+ + L + L + + N + ++ Sbjct: 404 DIDKELQILDSKFQRIYFDNLSGIINERNFKSLIACIDNQQQRLISKRKDIENLYLNYNY 463 Query: 437 -------YAIDLT-SKNGRELCRTLAYKTFEKIIINTD----NKTCDIYFM 475 Y I + N E+ R + +KII++ + K D+Y+ Sbjct: 464 KEKIYCQYKIQIDKILNFEEIDRFIIESLIDKIIVSENKITKKKNIDVYYK 514 >UniRef50_C9XQS3 Conjugative transposon site-specific recombinase n=38 Tax=Firmicutes RepID=C9XQS3_CLODC Length = 537 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 91/526 (17%), Positives = 179/526 (34%), Gaps = 90/526 (17%) Query: 5 IAYMRFSSPGQMSGDS--LNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 Y+R S ++ G+S + QR ++ + K + +D Y D G S G + + + Sbjct: 9 ALYLRLSRDDELQGESSSITTQRSMLRLYAKEHHLNVID--EYIDDGWS---GTNFERPS 63 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F ++ IE G I ++ + L RL R + +H + I + D Sbjct: 64 FQRMIEDIEAGKI---NCVVTKDLSRLGRNYIMTGQYTELYFPSHNVRYIAIDDGVDSEK 120 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL-D 181 + K I+ A + S +VK ++K K G A P Sbjct: 121 GE--SEIAPFKNIINEWVARD----TSRKVKSAFKTK----FAEGAHYGAYAPLGYKKHP 170 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSG-------------- 227 D + + D + +E IF L + I K L + V S Sbjct: 171 DIKGKLLVDDETKWIVEKIFSLAYQGYGSAKITKVLREEKVPTASWLNFTRYGTFAHIFE 230 Query: 228 -----KESAWGPSVIEKLLANKALIGICVPS------YRARGKGISE------IAGYYPR 270 K W + ++ +L ++ IG V + ++++ K + + Sbjct: 231 GKPESKRYEWTIAHVKAILKSEVYIGNSVHNMQSTVSFKSKKKVRKPESEWFRVENTHEP 290 Query: 271 VISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIV--HAVSGSLHGY 328 +I ++FY VQE + + P + ++KC CG +M + + + + Y Sbjct: 291 IIDKEVFYRVQEQIKSRRRQTKEKATP----IFAGLVKCADCGWSMRFATNTANKTPYSY 346 Query: 329 YVCPMR---RLHRCDRPSIKRDLVDYNIINELLFNCSKIQPVENK--------------- 370 Y C C I+ D++ ++ L + +Q E K Sbjct: 347 YACSYYGQFGKGTCSMHYIRYDVLYQAVLKRLQYWAKAVQQDEEKVLNKIQKAGNAERIR 406 Query: 371 ----------KDANETLELKIIELQMKINNLIVALSVAPEV---TAIAEKIRLLDKELRR 417 K N E+ + +M + ++ V + ++ L++++ Sbjct: 407 EKKKKASAFKKAENRQNEIDRLFAKMYEDRACEKITERNFVMLSSKYQKEQIELEQQITN 466 Query: 418 ASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIII 463 L ++ + + + + +EL L EKI+I Sbjct: 467 LREELSKMEQDMIGAEK-WIELIKEYSVPKELTAPLLNAMIEKILI 511 >UniRef50_C1CGJ9 INT n=2 Tax=Streptococcus pneumoniae RepID=C1CGJ9_STRZJ Length = 475 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 88/496 (17%), Positives = 179/496 (36%), Gaps = 50/496 (10%) Query: 3 KAIAYMRFSSPGQ-MSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 K Y+R S+ Q G S++ Q+ + + K+ D Y D G F G + Q Sbjct: 6 KVAIYVRVSTTNQVEEGYSIDEQKDKLEAYCKIKDWKIYDV--YVDGG---FSGANTQRP 60 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 + ++ + +LV LDRLSR + + + + I+L +N + Sbjct: 61 ELERLISDVKRKKV---DIVLVYKLDRLSRSQKDTLFLIEDVFAKNDVAFISLQENFDTS 117 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 P+ +++ A E E R+ L + + A ++ + Sbjct: 118 T-----PFGKASIGMLSVFAQLEREQIKERMMLGKEGR---AKNGKSMSWTTIAFGYDYS 169 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 + +P + + IF + + + I + LN G++ WG ++ + LL Sbjct: 170 KETGVLSVNPTQALIVNRIFTEYLNGKPVVKIIRDLNAEGH---VGRKRPWGETITKYLL 226 Query: 242 ANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQ----EIRLAPFGISNSSKNP 297 N+ +G + G + +I+ +LF VQ +++ + N+ + Sbjct: 227 KNETYLGKVKYKDKVY-------EGQHEPIITQELFDLVQLEVERRQISAYEKYNNPRPF 279 Query: 298 MLINLLRTVMKCEACGNTM----IVHAVSGSLHGYYVCPMRRL----HRCDRPSIKRDLV 349 +L +MKC CG ++ +G H Y C R RC+ ++ + Sbjct: 280 RAKYMLSGLMKCGYCGASLGLRYTRKDKNGISHHKYQCRNRHSKDLEKRCESGWYSKEEL 339 Query: 350 DYNIINEL---LFNCSKIQPVENKKD---ANETLELKIIELQMKINNLIVA-LSVAPEVT 402 + +I EL F+ KK+ E ++ ++ + +++ L L Sbjct: 340 ERGVIKELERIKFDPKYKNETLAKKEETIKVEEIKKQLERINNQVSKLTELYLDEIITRK 399 Query: 403 AIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKN----GRELCRTLAYKTF 458 + EK + E + L+ KS ++ L + E + Sbjct: 400 ELDEKNDKIKTERQFLEEQLENQKSNVLSIRKRKLTRLLKDFDVEKLSYEDASKIVKNII 459 Query: 459 EKIIINTDNKTCDIYF 474 ++II+ D + + F Sbjct: 460 KEIIVTKDGMSITLDF 475 >UniRef50_B5IL90 Putative phage recombinase n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IL90_9CHRO Length = 652 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 101/479 (21%), Positives = 177/479 (36%), Gaps = 47/479 (9%) Query: 16 MSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFSEFLDAIEHGYI 75 L RQ + + WL + D+ L + D G+SA +GKH +GA FL A G + Sbjct: 3 ADRSGLERQEQALRSWLAEHPDWEL-AESLVDPGVSAGRGKHRTTGALGRFLQAARTGAV 61 Query: 76 LPGTTLLVESLDRLSREKVGEAIE-RLKLILNHGIDVITLCD-NTVYNIDSLN-EPYSLI 132 PG+ L+VES+ R SRE + + L G+ + D V + + ++ EP+ L Sbjct: 62 PPGSCLVVESMSRFSREAERQVLGVLLSDFWATGLAIAFCSDGGAVLDAELIDREPHRLH 121 Query: 133 KAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDKR-------T 185 + +A E E KS R + + KRQ + G + A+ P W++ R Sbjct: 122 GLLGAMAQARREWEEKSRRSRGA-AVKRQQLQDQGVKVAAATPWWIARGSDRRLVRDTAG 180 Query: 186 AFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKES----------AWGPS 235 D V T+ +L M+ IA+ LND + W S Sbjct: 181 NLQLDQACVATLRRAVELAMQGLGSTLIAQQLNDEGHSPPPTRTRRNQYAANAGEGWNHS 240 Query: 236 VIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQE--IRLAPFGISNS 293 + L N AL+G + S + G+YP V+S + + ++ Sbjct: 241 RVTTALRNPALVGDL------HRQDGSTLEGFYPPVVSRNEWEQLRSGMAMRDKLRGQLR 294 Query: 294 SKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGY-------YVCPMRRLHRCDRPSIKR 346 L L +TV +C CG M H C +R + + R Sbjct: 295 GGTQKLHFLFQTVCRCA-CGEPMSYHPPGRGARADHPGWVACRACNLRDAPGPGKGYVFR 353 Query: 347 DLVDYNIIN--------ELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVA 398 D ++ + + ELL + Q + D TL + + ++ L + Sbjct: 354 DQMEAHCLTRLASTTWAELLSDPGTEQERQRLADEVVTLRHQRRQQARQLERLEARAAAL 413 Query: 399 PEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKT 457 E++ +++ + +A + L + + ++ +G + LA + Sbjct: 414 WTQEVPEERLATVERAIGQARQQSEALTLELEARTKELQILEA-QPDGTQAGEELAARV 471 >UniRef50_D0LQK1 Resolvase domain protein n=12 Tax=Haliangium ochraceum DSM 14365 RepID=D0LQK1_HALO1 Length = 537 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 83/441 (18%), Positives = 152/441 (34%), Gaps = 47/441 (10%) Query: 2 KKAIAYMRFSSPGQMSGD--SLNRQRRLIAEWLK--VNSDYYLDTITYEDLGLSAFKGKH 57 K+A Y R S+ + D SL+ QR +++K + + L Y+D G F G + Sbjct: 16 KRAAIYTRKSTGKGLDRDFNSLDAQREACEQYIKSQAHQGWQLVETHYDDGG---FTGAN 72 Query: 58 AQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDN 117 AF+ L ++ G I ++V LDRLSR + A + + + N Sbjct: 73 IDRPAFARLLRDVDAGKI---DIIVVYKLDRLSRSLLDFA-NLISRFNQTDTAFVAVTQN 128 Query: 118 TVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRW 177 S + + ++ A E E+ S R + R+ +G + P Sbjct: 129 F-----STADAIGRLTLNILMSFAEFEREMISERTRDKVAGSRKRGKWTGGPL----PVG 179 Query: 178 LSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESA------ 231 + DK+ + + + IF + S+ IA+YLN+ + + Sbjct: 180 YASRDKK--LIVVEREARIVREIFARYLRGDSVFEIARYLNESGRRKPARTSRTGHVLAK 237 Query: 232 --WGPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFG 289 W + + L N G G G + +I + F RLA Sbjct: 238 REWDKGSVLRALKNPVYAGFMRF-------GGELFEGEHKAIIDRESFEQA-AARLAANC 289 Query: 290 ISNSSKNPMLINLLRTVMKCEACGNTM----IVHAVSGSLHGYYVCPMRRLHR---CDRP 342 SN+ K P +L + C CG+ M +G L+ YY C ++ C Sbjct: 290 ASNAPKVPRDDYVLSGRLFCVLCGSAMTPKSTTKRRTGKLYRYYQCVVKDKSGHDACPAR 349 Query: 343 SIKRDLVDYNIINELLFNCSKIQPVENKKDANETLELKIIE--LQMKINNLIVALSVAPE 400 + ++ ++ + + + E + L + + + + Sbjct: 350 PLPAAGIEAYVVERIRVVTAGGALARDVAARVEAHGARRRAELLAERTARASEIAARSAD 409 Query: 401 VTAIAEKIRLLDKELRRASVS 421 A+ + + LD RR Sbjct: 410 GRALLDTLVGLDASARRLVEE 430 >UniRef50_C8RU76 Resolvase family prophage LambdaSa04, site-specific recombinase n=2 Tax=Bacteria RepID=C8RU76_CORJE Length = 532 Score = 219 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 80/516 (15%), Positives = 172/516 (33%), Gaps = 60/516 (11%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 +++ Y R S+ S Q ++ ++ + + Y D G++ KH Sbjct: 25 LRRVAGYARVSTDHDDQVTSYEAQVDYYTRYISDHAGWQFVKV-YTDEGITGTSTKH--R 81 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 F + + G I ++ +S+ R +R V +++ ++ + + G++V + Sbjct: 82 AGFQQMVTDALDGKI---DLIITKSVSRFARNTV-DSLTTVRALKDKGVEVFFEKEG--- 134 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 I + + L+ I+ + A EE+ S V +K+ G + Sbjct: 135 -IWTFDAKGELLITIM-SSLAQEEARSISENVTWGHRKR----FADGKVTVPYSRFLGYD 188 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 + + V +P++ KT+ I+ + + S+ IA+ L D + W I + Sbjct: 189 KGEDGSLVINPEQAKTVRRIYNMYLGGMSIGTIARTLTDEPETFTAAGNKTWYYRSIRAI 248 Query: 241 LANKALIGI------CVPSYRARGKGIS--EIAGY-----YPRVISDDLFYAVQEIRLAP 287 L N+ G V Y + + I+ E+ Y + +IS ++ VQ Sbjct: 249 LTNEKYKGDALLQKSYVADYLTKRQVINQGEVPQYYVTASHEAIISPAVWDFVQA---EI 305 Query: 288 FGISNSSKNPMLINLLRTVMKCEACGNTM---IVHAVSGSLHGYYVCPMRRLH--RCDRP 342 + + + +C CG+ HA S + C + +C Sbjct: 306 AKGARDQRTQHRTRPFSSTFECSQCGHFFGSKTWHAGSKYEKVIWRCGHKYAGQDKCATG 365 Query: 343 SIKRDLVDYNIINELLFN-------------CSKIQPVENKKDANETLELKIIELQMKIN 389 I + + + + + + +A L +I E+ K+ Sbjct: 366 HISDQRLKDMFLEAIRLRFGSPTDTGVSQAVLDALDTSDLEVEAAGLL-AQINEVAKKLQ 424 Query: 390 NLIVALSVAPEVTAIAEKI-----RLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLT-- 442 ++I + + EK L + + +++K + Y + T Sbjct: 425 SMIAHNARVAQDQQAYEKAFNASHEQHQALLAEHAAVVAEIQNKNNRLAAYHYYREETAN 484 Query: 443 -SKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNG 477 L EK ++ D F +G Sbjct: 485 LDLEQLVFSPYLCVALLEKGTVDVDG-NVTFQFRDG 519 >UniRef50_UPI0001C3787A resolvase domain protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C3787A Length = 575 Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 100/545 (18%), Positives = 188/545 (34%), Gaps = 93/545 (17%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 K + Y R S+ + +L Q L+ + ++ +Y D G++ K + Sbjct: 11 KNVVIYARVSTEHEAQLSALENQLDWYKPLLEQHPEWTFV-RSYVDEGITGTSAK--KRP 67 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F + L ++G +L + R +R V + ++ + + G++V + DN Sbjct: 68 QFMQMLSDAKNG---DFNLILTREVSRFARNTV-DTLQYTRDLKRLGVEVFFINDN---- 119 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 I + + L I+ A A +ES S RVK Q ++E+G + Sbjct: 120 IRTFDGDGELRLTIM-ATLAQDESRKTSIRVKSGQ----QTSMENGVYYGNGNILGYNRV 174 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 K V DP++ KT+ I+ ++ + I L V GK + W S I K+L Sbjct: 175 GKE--LVIDPEQAKTVRKIYDWYLDGMGVRQIQFELEKEGVLTAMGK-TRWYESNISKIL 231 Query: 242 ANKALIGICVPSYR-----ARGKGIS--------EIAGYYPRVISDDLFYAVQEIRLAPF 288 N GI + K I+ + G + +++ + F VQEI + Sbjct: 232 KNPFYAGILEYHKQFTPDFLEQKKINNFGEIDRLRVDGRHEPIVTLEEFNRVQEIMESKR 291 Query: 289 GISNSSKNPM-------LINLLRTVMKCEACGNTM---IVHAVSGSLHGYYVCPMRRLHR 338 + ++K + ++ ++ C CG T + H S Y+C + + Sbjct: 292 LKNPANKTGRKEKGKKPVSDVWCRLLVCS-CGCTFNRKVWHTTSKGTQYGYMCYSQIRNG 350 Query: 339 ---------------CDRPSIKRDLVD---YNIINELLFNCSKIQPV------------E 368 C I + N+ E L N +I + E Sbjct: 351 TIRTRLKKGLPTEGICTSQMIPGWKLQFMAKNLFREFLRNTDRILDIAEEMLEKHINDEE 410 Query: 369 NKKDANETLELKIIELQMKINNLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSK 428 +D E + K EL+ L +S+ + E+ + E+ SL+ + Sbjct: 411 ITEDNTELIAQKKAELEKLEKRLSKLISMRADDEITKEQFMNMKSEVDTQIASLQEQICE 470 Query: 429 GVNSFSDFYAIDLTSKNGR------------------ELCRTLAYKTFEKIIINTDNKTC 470 + D+ N R ++ + EKI++ + + Sbjct: 471 LSPTEKVTETSDVPDYNERITLLRYALERYTNFDSDEDIPEAVIEAFVEKIVV--NENSF 528 Query: 471 DIYFM 475 D Y Sbjct: 529 DWYLH 533 >UniRef50_B2V2D8 Putative resolvase n=2 Tax=Clostridium RepID=B2V2D8_CLOBA Length = 563 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 102/506 (20%), Positives = 189/506 (37%), Gaps = 64/506 (12%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 MKK+ Y+R S+ Q+ DSL Q++ + + K Y L+ YE + + GK+ Sbjct: 1 MKKSALYIRVSTHYQIDKDSLPFQKKELINYSK----YILNIDEYEIFEDAGYSGKNTVR 56 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 AF + + I+ G T LLV +DR+SR + + + + + I+ + Sbjct: 57 PAFQDMISRIKKGEF---THLLVWKIDRISRN-LLDFCAMYEELKKYNCTFISKNE---- 108 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 D+ + + +++ A E ++ S RV + L +G A CP S Sbjct: 109 QFDTSSATGEAMLKLVLI-FAELERKLTSERVSAIMLDRANKGLWNG----AQCPLGYSW 163 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 ++++ + D +TI+LI+ S +AK LN +K ++ W + + Sbjct: 164 NEEKKFPDINKDESETIKLIYNTYENISSSLQVAKMLNSEHIKTK--RDGKWSSKTVSDI 221 Query: 241 LANKALIGICVPSYRARGKGISE-------IAGYYPRVISDDLFYAVQEIRLAPFGISNS 293 + N G +YR +G + + + +IS + + +I + S Sbjct: 222 IRNPFYKGTYRYNYRESARGKIKDESEWIIVEDNHSPIISKEQWEHCNKIMDINAQRNTS 281 Query: 294 -SKNPMLINLLRTVMKCEACGNTMI----VHAVSGSLHGYYVCPMRRLH-RCDRPSIKRD 347 + I++ +++KC+ CG T I V G YY C + CD I Sbjct: 282 LYRKNSNIHVFASLIKCKKCGETFIANCDVTRKDGYRPSYYYCKGKYGSYGCDAKLISDV 341 Query: 348 LVDYNIINEL---------------------LFNCSKIQPVENKKDANETLELKIIELQM 386 + IIN L K D L + L Sbjct: 342 TLGPFIINYLANLLKAQKKLNKKNNLKDLEQFLLSGKTFVNIAGIDRANLESLYLSFLYS 401 Query: 387 KINNLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNG 446 K +N+++ +V + + +L KE + + + + L+S + L S + Sbjct: 402 KTDNVLLKTKDKSKVIDLKSNLSVLTKEKEKYNRAFERLQS-----------LYLFSDDA 450 Query: 447 RELCRTLAYKTFEKIIINTDNKTCDI 472 L K ++ NK D+ Sbjct: 451 MSEKDFLVQKLKLTEKLDEVNKKIDL 476 >UniRef50_A8SBA3 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SBA3_9FIRM Length = 493 Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 86/516 (16%), Positives = 174/516 (33%), Gaps = 68/516 (13%) Query: 3 KAIAYMRFSSPGQMS-GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 + I Y+R S+ Q G S+ Q+ + + ++ D G F G + Sbjct: 2 RVICYVRVSTREQAEKGYSVGEQQERLRAYCIAKD--WIVEDVITDPG---FSGAKLERP 56 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 + ++ +LV LDRLSR + + L +G +++ +N Sbjct: 57 GIQRVIRLVQEKKCEA---VLVWKLDRLSRSQKDTLYLIEDVFLKNGCAFVSMNENF--- 110 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 D+ + IL + A E E R+ + + + L G P Sbjct: 111 -DTSTAFGRAMIGIL-SVFAQLEREQIRERMAVGRVGRAKAGLFHG---GGYAPIGYDYK 165 Query: 182 ---DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGP-SVI 237 + V + + +F L ++ +N I KY+ ++ K WG + I Sbjct: 166 TIAEGGEGLVVNEYEAMQVREVFSLYLQGWPVNRIRKYMTAR----YTTKSGDWGNDTTI 221 Query: 238 EKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISN----- 292 +L N IG + + G + +I ++ F A + + Sbjct: 222 RDVLKNPLYIGKINWAKKIY-------DGKHEPIIDEETFNAAAARLASSQWKRDCSDGL 274 Query: 293 -SSKNPMLINLLRTVMKCEACG------NTMIVHAVSGSLHGYYVCPMR--------RLH 337 + +LL ++ C CG + YYVC R R Sbjct: 275 ERNSPFHSTHLLGGILWCGRCGARYFASGNYSGKGENRKYWPYYVCYSRAKSAKRMIRDP 334 Query: 338 RCDRPSIKRDLVDYNIIN---ELLFNCSKIQPVE--NKK----DANETLELKIIELQMKI 388 C +D I++ +L+F+ ++ N++ + L + E + +I Sbjct: 335 NCKNDRWPVAKLDKIILDQVRQLIFDPEALERAAGGNQEAPPSERRALLNARRAEAKGQI 394 Query: 389 NNLIVALSVAP-EVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFY------AIDL 441 + L+ + A+A++++ L E+ +L+ L+ + A ++ Sbjct: 395 DRLLDLCQMGTLPAAAVADRLKSLQDEVEGIDTALRELEEDDPAERLEAARATLVGAAEI 454 Query: 442 TSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNG 477 + R L + +I ++ +N F G Sbjct: 455 LDNGSLDEKRELVHSLIHRIDLDGENIDIHWSFAPG 490 >UniRef50_C0ECX6 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0ECX6_9CLOT Length = 482 Score = 218 bits (554), Expect = 5e-55, Method: Composition-based stats. Identities = 81/503 (16%), Positives = 175/503 (34%), Gaps = 58/503 (11%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITY-EDLGLSAFKGKHAQ 59 M+ A AY+R S+ Q+ S + Q I + K + + Y ED G+S K K + Sbjct: 9 MRVAAAYIRVSTDDQLE-YSPDSQLIEIRRYAKAHDIVIPEDYIYIEDDGISGRKTK--K 65 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 AF + + P +L+ R +R + + + L GIDVI++ + Sbjct: 66 REAFQRMIGTAKT-KPKPFDVILLWKFSRFARNREDSVVYKSMLRKQLGIDVISVSEPL- 123 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 ++ S++ +I S S V +K + + S Sbjct: 124 -----SDDKMSILIEAMIEAMDEYYSINLSEEVTRGMTEKVRRGE-----PVSIPAFGYS 173 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEK 239 + K + P+P + +F+ +A LND +++ G + + +E Sbjct: 174 I--KEKQYYPNPKTAPIVRSLFEEYAAGAGCRDLATKLNDMGIRSTRG--NPFENRTVEY 229 Query: 240 LLANKALIGICVPSYRAR------GKGISEIAGYYPRVISDDLFYAVQEIRLAPFGI--S 291 +L N IG+ S + + + G + +++ +L+ VQ+ Sbjct: 230 ILRNPVYIGMIRWSPEGKISRNYTKSNVMVVQGSHEPIVTRELWEQVQDRLDEVKRTYPK 289 Query: 292 NSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCD-RPSIKRDLVD 350 + +L+ +++C CG+T++ + C C SI ++ Sbjct: 290 YARVRERCDFMLKGLVRCSNCGSTLVHASTGS-----LQCHSYGRGSCKVSHSITLPKIN 344 Query: 351 YNIINELLFNCS------KIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTAI 404 +I + ++P + D N ++ +I + K++ + A + Sbjct: 345 KIVIESIEATFRLGVFPLTVKPSKQSIDENALIQQQIQREKRKLDRIREAYENEVDT--- 401 Query: 405 AEKIRLLDKELRRASVSLKTLKSK-----GVNSFSDFYAIDLTSKN-------GRELCRT 452 + + ++ LK++ V+ F+ + S Sbjct: 402 ---LEEYKANKEKILTEIERLKAQLTPTPPVDLRKKFFEKNKNSVQKLKDPTISESEKNE 458 Query: 453 LAYKTFEKIIINTDNKTCDIYFM 475 + + I+ N T D+++ Sbjct: 459 ILRSFVDHIVFNRAKGTVDVFYY 481 >UniRef50_B9IZ84 DNA recombinase, putative n=9 Tax=root RepID=B9IZ84_BACCQ Length = 491 Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats. Identities = 93/517 (17%), Positives = 188/517 (36%), Gaps = 72/517 (13%) Query: 1 MKKA---IAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKH 57 MK+ Y+R S+ S+ Q + WL+ N + + ++D G+S + Sbjct: 1 MKRLGSYAIYVRVSTDRDEQVSSVENQIDICRNWLERNGFIWDEKRVFKDEGISGTLFVN 60 Query: 58 AQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDN 117 A L + I ++ +S+ RL+R+ + +++E +++L H + +I++ + Sbjct: 61 --RPAIQLLLQKAKAKEI---DMVVFKSISRLARD-LKDSLEIREVLLAHNVRIISVEEG 114 Query: 118 TVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRW 177 DS+ + + L + + + S SS + + K + G + P Sbjct: 115 ----YDSVKAGKNDMAFELWSLFSAQYSRTLSSSITAALAVKVRRGEHIGKV-----PFG 165 Query: 178 LSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVI 237 + ++++ V + + ++ I+ + I LN VK+ + K W + + Sbjct: 166 YNRENQK--LVIHDEEAEIVQKIYSWYTDGWGYKKITNELNRLGVKSKTKKN--WQMTSV 221 Query: 238 EKLLANKALIGICVPSYRARGKGISE-------------IAGYYPRVISDDLFYAVQEIR 284 +++L N G + + K + ++P +I ++++ V Sbjct: 222 QRILRNPIYKGTFILNQYTSVKVSGKKKQIRNPKEKWFVFPNHHPAIIDEEVWNQV---- 277 Query: 285 LAPFGISNSSKNPMLINLLRTVMKCEACGNTMI-VHAVSGSLHG------YYVCPMRR-- 335 P + + N R + KC C + M+ V + S +G Y C R Sbjct: 278 -NPKDTNTNKTKITAWNEFRNLAKCAVCSSNMVIVQSYSKKKNGERTEWKYLKCSQYRRA 336 Query: 336 -LHRCDRP-SIKRDLVDYNIINELLFNCSKIQPVENKKDANETLELKIIEL--------Q 385 H C I+ II+ LL + ++ + + E E KI +L Q Sbjct: 337 GKHGCVNHVPIQYRDFRQFIID-LLVKKGESVTLKLQGNIEEGQEKKIKKLQQLMNVNEQ 395 Query: 386 MKINNLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKN 445 K L + L +K L+ E+ +A+ L L+ + T K Sbjct: 396 KKKALLDLYLEGLINKEEFEKKRNDLEAEITKANHELFILQQNDIVQTD-----IKTIKE 450 Query: 446 GRELCRTL-------AYKTFEKIIINTDNKTCDIYFM 475 E R +KI+I+ D Y Sbjct: 451 AFEQLRQREHDLYHVFQTLIQKIVIHQDGMVDITYTF 487 >UniRef50_C2KNU8 Site-specific recombinase n=2 Tax=Actinomycetales RepID=C2KNU8_9ACTO Length = 523 Score = 217 bits (552), Expect = 9e-55, Method: Composition-based stats. Identities = 95/508 (18%), Positives = 185/508 (36%), Gaps = 60/508 (11%) Query: 11 SSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFSEFLDAI 70 S+ + S Q ++ +D+ + Y D G+S KH F +D Sbjct: 36 STEMEEQTSSYEAQIDYYTTYIHSRNDWQFAGM-YCDEGISGTSMKH--REGFQTMIDDA 92 Query: 71 EHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDSLNEPYS 130 G I +L +S+ R +R V +++ ++ + + G++V +N +Y D+ E Sbjct: 93 LAGKI---DLILTKSVSRFARNTV-DSLTTVRKLKDAGVEVYFQKEN-IYTFDTKGE--- 144 Query: 131 LIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDKRTAFVPD 190 + +++ A EES S V +K+ G IM + V D Sbjct: 145 -LLITIMSSLAQEESRSISENVTWGHRKR----FADGKIMVPYASLLGYKKGADGSLVID 199 Query: 191 PDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLANKALIG-- 248 + T+ LI++L ++ +++ I L + GKE W S + +L+N+ G Sbjct: 200 ETQAPTVRLIYQLFLDGMAISEIKTELAARKILTPRGKE-VWSTSTVRSILSNEKYKGDA 258 Query: 249 ----ICVPSYRARGKGISE-------IAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNP 297 + + ++E + G + +I+ ++ VQ G +S+K Sbjct: 259 LLQKTFTTDFLTKKMKVNEGEVPQYYVTGNHEPIIAPHIWDQVQYELSTRHGNISSAK-- 316 Query: 298 MLINLLRTVMKCEACGNTM---IVHAVSGSLHGYYVCPMRRL--HRCDRPSIKRDLVDYN 352 + L T +KC CG + + + + C + H C ++K + + + Sbjct: 317 --VGLFSTRLKCFQCGAWYGRKTWASNTKYKYTVWQCNHKYAGQHPCSSATVKDEQIKDS 374 Query: 353 IINELLFNCSK-------------IQPVENKKDANETLELKIIELQMKINNLIVALSV-A 398 + L ++ + ++ + KI+EL +I LI A Sbjct: 375 FVQALNQLIARHRYESHLPQVLGDMFDTSRLEEQAAACQAKIVELTEQIEALIAENQQRA 434 Query: 399 PEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAI-----DLTSKNGRELCRTL 453 + A LD R+ +L++ + + AI DLT + E Sbjct: 435 LDQDAYQAHYTELDTAYRKTLARKASLEADIAANTAKHAAITTTLNDLTGEPVSEFHPAQ 494 Query: 454 AYKTFEKIIINTDNKTCDIYFMNGIVFK 481 + I+ D T F G V + Sbjct: 495 WSALIDHAIVGED--TIRFVFRVGEVVR 520 >UniRef50_C6QVK4 Resolvase domain protein n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QVK4_9BACI Length = 482 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 83/430 (19%), Positives = 157/430 (36%), Gaps = 44/430 (10%) Query: 3 KAIAYMRFSSPGQ-MSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 + + Y R S+ Q G SL Q+ + + +D Y D G SA K+ Sbjct: 2 RCVMYRRVSTDMQKEEGFSLEAQKMRLEAFALSQGWTIVDD--YCDDGYSA---KNMDRP 56 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 A + ++ ++V LDRL R V + + LK++ + + + + + Sbjct: 57 ALQRLIKDMQQKKF---DVVIVYRLDRLVRS-VLDLHKLLKIMQKYDVMFKSATE----S 108 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 ++ L I+ A A E E + RV + ++ + +G P L Sbjct: 109 FETTTANGRLFITIV-ATIAEWERETIAERVFENMLERSKTGQRNGAP----APYGYDLV 163 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 D + + K + IF+ + IAK LN VK G W + +L Sbjct: 164 DGE--LRINEEEAKWVRFIFEKY-KTHGSQNIAKQLNQRGVKTKKG--EMWSDFSVRYVL 218 Query: 242 ANKALIGICVPSYRARGKG-------ISEIAG-YYPRVISDDLFYAVQEIRLAPFGISNS 293 N G +YR+ K ++ I + +IS + F VQE+ + ++ Sbjct: 219 RNPIYAGYIRWNYRSMSKQKLGGQPVVTPIKQENFVPIISKETFQEVQELLQNRYNMAFR 278 Query: 294 SKNPMLINLLRTVMKCEACGNTMIV---HAVSGSLHGYYVCPMR-RLHRCDRPSIKRDLV 349 S N V +C CG + SG ++ YY C R + CD +I + + Sbjct: 279 SDN---HYPFSGVARCAKCGKSFTGAQRKRKSGGVYRYYKCQGRFKFGNCDVQTIAEEAI 335 Query: 350 DYNIINELLFNCSKIQPVENKKDANET----LELKIIELQMKINNLIVA-LSVAPEVTAI 404 + + L VE + E +E ++ +L+ + + + Sbjct: 336 EKAFLEALHIPEKLELEVETNESEKELDTDFIEKQLQKLKGRKERIKELYIEGEIPKDEY 395 Query: 405 AEKIRLLDKE 414 ++++ + + Sbjct: 396 NKRMQEIAIQ 405 >UniRef50_C6CZ73 Resolvase domain protein n=7 Tax=Bacillales RepID=C6CZ73_PAESJ Length = 493 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 92/499 (18%), Positives = 188/499 (37%), Gaps = 59/499 (11%) Query: 1 MKKAIAYMRFSSPGQM-SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 ++ Y R S+ Q G SL+ Q + + + + Y D G SA K+ Sbjct: 13 LRFVALYCRVSTDEQAREGVSLDEQVERLKAYCRAMG-WSEQVQIYIDDGYSA---KNLD 68 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 L A++ G + ++V LDR+SR ++ + + + L +H + +++ ++ Sbjct: 69 RPELKRLLHAVKSGAVSR---IMVTKLDRMSR-RLLDLLNIIDLFQDHEVSFVSISESFD 124 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 N P + ++ A E E RV + A +G +T P Sbjct: 125 -----TNTPSGRLTLQVLGAVAEFERERIRERVFENMLH----AATTGKWLT-QSPYGYD 174 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRM-ERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIE 238 L DK + V + + ++ ++ + + E +IAK LN+ V + KE W I+ Sbjct: 175 LVDK--SLVVNIVESQIVKRVYDMYLNEGLGFYSIAKRLNEEGVPSRHRKE--WSIRAIK 230 Query: 239 KLLANKALIGICVPSYRARGKGISE---------IAGYYPRVISDDLFYAVQEIRLAPFG 289 +L N A G V + + K + + P +I ++ VQ+ P Sbjct: 231 LMLTNPAYKGTLVWNRKDSSKTQRKDKDEAEWVSVEECLPVIIDQPMWDKVQQRINQPSN 290 Query: 290 ISNSSKNPMLINLLRTVMKCEACGNTMIV--HAVSGSLHGYYVCP-MRRLHRCDRPSIKR 346 I+ +K +LL +++C CG+ M + + Y C + C + Sbjct: 291 IAPRAKTSP--HLLGGMLRCGNCGSGMSIGFSGSPNKRYRVYRCSANKNKGTCTSKQYRA 348 Query: 347 DLVDYNI---INELLFNCSKIQPVENKKD----ANETLELKIIELQMKINNLIVALSVA- 398 D V+ + +L+ N + + K+ E LE K+ + + + A + Sbjct: 349 DEVEAWFKEGLKQLVENKTGALTIMAKEAMVRSEREQLEQKVSTARARYKRKVEAYTSGL 408 Query: 399 PEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKN----------GRE 448 E+ + E+ LD+ ++ K + + ++L SK E Sbjct: 409 IELEDLNEEKARLDQFVQELE---KMSGGEIEPVNMEQLQLELNSKVNNIISAMDLLPVE 465 Query: 449 LCRTLAYKTFEKIIINTDN 467 + + + ++++ + Sbjct: 466 QAKGIIQTLVQYVVVHGEE 484 >UniRef50_B1IBJ7 Low similarity to site-specific recombinase n=34 Tax=Bacteria RepID=B1IBJ7_STRPI Length = 559 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 112/535 (20%), Positives = 202/535 (37%), Gaps = 72/535 (13%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ-SG 61 K Y R S+ Q+ G SL Q+ + + N Y YED G S GK + Sbjct: 7 KVYLYTRVSTSIQIEGYSLGAQKSRMKAFAIYND--YEIVGEYEDAGKS---GKSIEGRI 61 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F+ ++ I+ G + +LV L R +R + + L+++ ++G+++I + D Sbjct: 62 QFNRMMEDIKSGK-DGVSFVLVFKLSRFARN-AADVLSTLQIMQDYGVNLICVEDG---- 115 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 IDS + L+ ++L A E I+ ++ +K R+ G P L+ Sbjct: 116 IDSSKDAGKLMISVLSAVAEIERENIRIQTMEGCIQKARE-----GKWNGGFAPYGYKLE 170 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERR-SLNAIAKYLNDHA---VKNFSGKESAWGPSVI 237 D + + + I IF + N I+KYL +H + +GK + +I Sbjct: 171 DGK--LFINEEEAVAIRTIFDQYVNTTIGANGISKYLENHGIRKIPRQNGKNPLFDAGLI 228 Query: 238 EKLLANKALIG---------ICVPSYRARGKGISE-----IAGYYPRVISDDLFYAVQ-E 282 K+L N G V R K + + G + ++SD+++ A Q + Sbjct: 229 RKILKNPVYNGKIAFGRRTLEKVHGTRNEYKQVEQDEYLISEGIHEAIVSDEVWQAAQVK 288 Query: 283 IRLAPFGISNSSKNP-MLINLLRTVMKCEACGNTMIVHA--------VSGSLHGYYVCPM 333 ++ +K +LL ++KC CG M + YY C Sbjct: 289 LKSQAKKYERVNKGKDTRTHLLSGIVKCPICGVGMFGNKCIKKKKDGTKYKDFYYYGCKH 348 Query: 334 R---RLHRCD-RPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLELKIIELQMKIN 389 R R H C I+ +L+D + ++ S + ++ +++ E++ +I+ Sbjct: 349 RQMIRGHECTFSKQIREELLDDAVAEVIVKIVSNPKFASMMQEKIN-MKVDTSEIEKEID 407 Query: 390 NLIVALSVAPEVT-AIAEKIRLLDKELRRASVSLKTLKSK-----GVNSFSDFYAIDLTS 443 N L + + E+I LD E + + L + + ID + Sbjct: 408 NYQKELRKSHSTKFKLIEEIDNLDVEDKHYKRRKQDLDDRLCRMYDKIDELESSLIDAKA 467 Query: 444 KNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKHYPLMKVISAQQAISAL 498 K L K++I D K Y +M + +Q ISAL Sbjct: 468 KKQTIEAEKLTGDNIYKVLIYFD--------------KLYKVMNDVEHRQLISAL 508 >UniRef50_A6NUG8 Putative uncharacterized protein n=2 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NUG8_9BACE Length = 518 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 96/513 (18%), Positives = 186/513 (36%), Gaps = 64/513 (12%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 + AY R SS S Q R + ++ + + L + Y D G++ + + Sbjct: 19 RVAAYCRVSSDSSDQLHSYAAQIRYYTDMIQNHDGWELVDV-YADEGITGTR--MDKRED 75 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 + L G I +LV+S+ R +R + + L+ + G+ V +N I Sbjct: 76 LNRLLSDCRKGKI---DKVLVKSISRFARNT-RDCLASLRELSRLGVSVQFEKEN----I 127 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 D+ L+ ++ A +ES S ++S++++ +E G +T P L D Sbjct: 128 DTGTLTTELMVSV-SGSLAQQESVSISQNQRMSYQRR----MERGEFITCKAPFGYRLID 182 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 + D K + +F + SL IA+ + V GK W + + L Sbjct: 183 GK-RLEVISDEAKLVRWMFNAYLSGHSLEWIAEQMTKTGVSTTDGKPY-WQCTTVLYTLT 240 Query: 243 NKALIGICV---------PSYRARGKGISE---IAGYYPRVISDDLFYAVQEIRLAPFGI 290 N+ +G + P + + G ++ I +P +I+ F VQE+ Sbjct: 241 NEKYMGDSLCQKTFTTAFPFTQRQNHGEADQYYIENTHPAIITKGTFEKVQELLRQK--- 297 Query: 291 SNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLH--RCDRPSIKRDL 348 SN K P I L + C CG L +VC +C I Sbjct: 298 SNRQKIPRQIYPLSRKVYCGQCGTPFARRVGKSGL-VVWVCRKHDKGASKCTMGRIPESA 356 Query: 349 V---DYNIINELLFN--CSKIQPVENKKDANETLE-------------LKIIEL-----Q 385 + + N+L N + ++ ++ + L+ + E Q Sbjct: 357 LYAAFAGMYNKLKQNVGIVLLPALKQMEELRDALQRDDPAMLAVNRAIAQASEQSHRISQ 416 Query: 386 MKINNLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKN 445 ++ L+ A + A + I ++ L E RR + +++ + Sbjct: 417 LQAAGLLDADACAAKFNEINARLTQLRAERRRLLKNEDI--DDAIDALQRTADLIQCGPE 474 Query: 446 GRE-LCRTLAYKTFEKIIINTDNKTCDIYFMNG 477 E L + E+I++ +++TC +++ G Sbjct: 475 RLEGFDEGLFHDLVERIVV--ESQTCVRFYLRG 505 >UniRef50_UPI0001C370AB recombinase n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C370AB Length = 539 Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 106/533 (19%), Positives = 190/533 (35%), Gaps = 88/533 (16%) Query: 4 AIAYMRFSSPGQMSGDS--LNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 A Y R S G S + Q+ ++ ++ K + + I Y D G S G + + Sbjct: 9 AALYCRLSVDDGNYGGSVSIETQKIMLEQYCKDHK--ITNYIFYCDDGSS---GTNFERP 63 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 +F D I G I ++V+ L R R + E ++ + G+ I D + Sbjct: 64 SFQRMYDDISQGKI---DLVIVKDLSRFGRNYI-EVGSYVEEFKDSGVRFIAADD----S 115 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 DSLN L+ + N +E+ + V K ++ +G + + P LD Sbjct: 116 YDSLNNSDDLMFPMK-----NVINEMYARDVSKKTKAAKKAKARAGQYIGSKPPFGYKLD 170 Query: 182 -DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKN---------------- 224 + R V D +T+ IF+L + N +AK + V Sbjct: 171 PNDRHHLVVDEPAAETVRRIFRLFAQGCGYNKMAKLFREEKVLTPIAYFNLHNPDYFKSD 230 Query: 225 FSGKESAWGPSVIEKLLANKALIGICVPSY------------RARGKGISEIAGYYPRVI 272 + KE W + I +L N+ +G + R + + +I Sbjct: 231 YWRKEFDWHVTSIRVILENEVYLGNLIYGKQRNKSMKSKQKVRNDRDDWIIVENCHEPII 290 Query: 273 SDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVS---GSLHGYY 329 S +L+ V +I + S + + + ++ C CG+ + G+ HG Y Sbjct: 291 SQELWDTVHKIMKSKHRPSGTGQTQ----IFAGLLYCADCGHALTYSQKKRRDGTYHGAY 346 Query: 330 VCPMRRLHR---CDRPSIKRDLVDYNIINELL--------------------FNCSKIQP 366 C M + H C I D + ++N++ + CS + Sbjct: 347 SCWMYKTHGKEYCASHYITYDTIYSLVLNDIKRILAGYCNDEEKFRSFLEKRYRCSAQKE 406 Query: 367 VENKKDANETLELKIIELQMKINNLIVALSVAPEVTAIAEKI--RLLDKELRRASVSLKT 424 N K E + + EL I+ L SV ++T +I + E R + Sbjct: 407 NANLKKEYELKKKRYDELDRIISRLYED-SVLGKITESRFEIMSEEYESEQERIRSEIPE 465 Query: 425 LKSKGVNSFSDFYAIDLTSK------NGRELCRTLAYKTFEKIIINTDNKTCD 471 +K + SD A D + + +EL L + ++I ++ KT D Sbjct: 466 IKDRIAKLSSDNSAADKFIRVIKQYTDIKELNAALLNELIDRIFVHHKEKTSD 518 >UniRef50_A3DG43 Recombinase n=6 Tax=root RepID=A3DG43_CLOTH Length = 429 Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 76/377 (20%), Positives = 146/377 (38%), Gaps = 42/377 (11%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 + AY R S+ G+SL Q + + N DY + D G++ Sbjct: 18 RVCAYARVSTGSDAQGESLENQIQYYENLISNNPDYEY-AGVFADRGITGTTD---NRPE 73 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F L+ + G I ++ +S+ R +R ++ ++ + + G+++I +N I Sbjct: 74 FQRMLNLAKEGKI---DLIITKSISRFARNTAI-MLQVVRELKDIGVEIIFEKEN----I 125 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 +L+ L+ +L + A EES+ S +K KKK E G ++ + D Sbjct: 126 RTLSGDGELMLTVL-SSFAQEESKNISDNLKWRVKKK----FERGELIINTTRFLGYDKD 180 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 + V +P + ++ IF+ ++ + IAK LN+ V +G W S I +L Sbjct: 181 EYGDLVINPKEAEIVKRIFEDYLKGKGTFTIAKELNEDKVPTVAG--GRWQESTILNILK 238 Query: 243 NKALIGICVPSY----------RARGKGISE---IAGYYPRVISDDLFYAVQ--EIRLAP 287 N+ G + R +G+ + I + ++S +++ VQ R A Sbjct: 239 NEKYKGDAILQKYYTPDHLRKVSVRNEGVIDSYYIEDNHSPIVSREMWEQVQIEIARRAK 298 Query: 288 FGISNSSKNPMLIN--LLRTVMKCEACGNTMIVHAVSGS---LHGYYVCPMRRLHR---C 339 + + N L ++ C CG+T+ + + C + C Sbjct: 299 AKGNKAGDTKKYTNRYPLTGMLFCSKCGSTLRRRTWNSKLNCRKIVWQCSNYIKNGKDAC 358 Query: 340 DRPSIKRDLVDYNIINE 356 SI +++ I E Sbjct: 359 SGTSIDDEVISRLNIEE 375 >UniRef50_A3DG42 Recombinase n=7 Tax=root RepID=A3DG42_CLOTH Length = 442 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 73/376 (19%), Positives = 143/376 (38%), Gaps = 43/376 (11%) Query: 6 AYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFSE 65 AY R S+ S Q ++ + DY I Y D G+S K + F++ Sbjct: 3 AYCRVSTDQLEQLSSYEAQVAYYTSYITNHPDYEFGGI-YADEGISGTNTK--KREQFNK 59 Query: 66 FLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDSL 125 ++ + G I ++ +S+ R +R + + + ++ + GI VI +N I++L Sbjct: 60 MIEDCKAGKI---DMIITKSISRFARNTL-DTLNYVRQLKELGIGVIFEKEN----INTL 111 Query: 126 NEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDKRT 185 + ++ IL + A +ES S +++ E G + D+ Sbjct: 112 DSKGEVLLTIL-SSLAQDESRSISENSTWGIRRR----FEQGKLHINHTKFLGYDKDEEG 166 Query: 186 AFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLANKA 245 V + + K + I+K ++ + N IA+ L + V N++GK W S I K+L+N+ Sbjct: 167 NLVINEKQAKIVRRIYKDYLDGKGANRIARELEEEGVPNWNGKP-KWYESSIRKILSNEK 225 Query: 246 LIGICVPSY--------RARGKGISEIAGY-----YPRVISDDLFYAVQEIRLAPFGISN 292 G + + R E+ Y +P +I +++ AVQ + Sbjct: 226 YKGDALLQKTYTVDFLTKKRAVNNGEVPMYYVEESHPAIIDKEIWEAVQLEMERRRAFAE 285 Query: 293 SSKNPML-----INLLRTVMKCEACGNTM---IVHAVSGSLHG-YYVCPMRR----LHRC 339 L N + C CG+ + ++ L + C + C Sbjct: 286 KYNISKLDYATVDNPFAGRVICGHCGSAFGRKVWNSTDERLRRVVWRCNKKYEVKGKKSC 345 Query: 340 DRPSIKRDLVDYNIIN 355 + I ++ + +N Sbjct: 346 ENKHIDDKVLYHAFVN 361 >UniRef50_C5D538 Recombinase n=2 Tax=Bacillaceae RepID=C5D538_GEOSW Length = 498 Score = 216 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 103/516 (19%), Positives = 184/516 (35%), Gaps = 71/516 (13%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 K Y+R S+ + +S Q++LI +L N Y Y D G + Sbjct: 2 KVAGYIRVSTNKEGQKESPENQKQLILNFLAENQ--YDLYDFYTD----VETGTTDKREG 55 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 + + E+ ++ + L RL R V + ++ G+ +ITL D V Sbjct: 56 LKKLIRDAENKQF---DIIVAKELSRLGRN-VELLYQLKRIAETKGVRLITL-DGRVDTQ 110 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 D + L A ES+ S R+K + K + SG M + P L D Sbjct: 111 DLSKQTM----FGLYAWVYESESQRISDRIKSVFHMKYK----SGKFMGSIAPYGYKLQD 162 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNF---SGKESA---WGPSV 236 + + D V+ + IF +E + IA+YL V SGK +A W + Sbjct: 163 GKL-IIRDDYTVEVVREIFNKYLEGWGHDKIARYLTKKKVPTPAQVSGKSNAGLYWQGTT 221 Query: 237 IEKLLANKALIGICVPSYRARGKGISE------------IAGYYPRVISDDLFYAVQEIR 284 I+K+L+N +G V + ++ + + +IS ++F Q++ Sbjct: 222 IKKILSNPHYVGDLVQNRETSTNITNKKRKVNTQNEWIIVPNTHEPIISREVFEQAQKLL 281 Query: 285 LAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHR---CDR 341 + K +L ++ C CG +M Y+C H C Sbjct: 282 ESKAWKGR-GKTKAQKHLFTNILYCADCGASMWYRHNRKG----YICGNYAKHGNIACSH 336 Query: 342 PSIKRDLVDYNIINEL----------------------LFNCSKIQPVENKKDANETLEL 379 +IK + I+ +L L + I+ +K + ++L Sbjct: 337 HAIKEQQLIETILTDLKGIYESFERLDTENQIKNKVHELQKKNAIRLQTIEKQIQKQMDL 396 Query: 380 KIIELQMKINNLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAI 439 K LQ I I V+ I +K++ L+ E ++ +S S Sbjct: 397 KRNALQKFIGGDISKEDYHDFVSMIQDKLQQLEIEKSTIKKAMVDSQSTTDLSTIRKQLD 456 Query: 440 DLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFM 475 + S L + + E+I ++ +N+ IY+ Sbjct: 457 EFLSFQ--TLTTEMVLRFIERIEVD-NNQNVKIYYK 489 >UniRef50_UPI000169299B site-specific recombinase for integration and excision n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI000169299B Length = 478 Score = 216 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 101/484 (20%), Positives = 182/484 (37%), Gaps = 47/484 (9%) Query: 3 KAIAYMRFSSPGQMS-GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 + Y R S+ Q G SL+ Q + ++K + Y D G SA K+ Sbjct: 2 RVCKYRRVSTDMQREEGVSLSTQDERLDAFIKSQG--WTVVADYADEGFSA---KNMDRP 56 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 A + + ++ +LV LDRL R V + E L+++ H + + + Sbjct: 57 AIQQLIQDLKR---DKFDVVLVYRLDRLVRS-VSDLHELLQIMDKHDVKFKSCTE----V 108 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 D+ + + I+ A A E E + RV + + + + +G P Sbjct: 109 FDTTSATGRMFITII-ATLAQWERETIAERVFDNMLARSEKGMRNGAP----APYGYIYK 163 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 D V + K ++ IF + IAK LN +K G W I LL Sbjct: 164 DGSLELV--KEEAKWVKFIFDKY-KTTGSQNIAKTLNKRGIKTRKG--EVWSDFSIRYLL 218 Query: 242 ANKALIGICVPSYRARGKG-------ISEIA-GYYPRVISDDLFYAVQEIRLAPFGISNS 293 N G +YR+ KG I +I + +I+ + F +Q + ++ Sbjct: 219 RNPIYAGYVRWNYRSLAKGKCTGDEVIQKIDQDNFQAIITKEEFDEIQILIKERSTVAFR 278 Query: 294 SKNPMLINLLRTVMKCEACGNTMIV---HAVSGSLHGYYVCPMR-RLHRCDRPSIKRDLV 349 S N V KC CGN++ + SG ++ +Y C R R CD P I + + Sbjct: 279 SDN---FYPYSGVAKCAKCGNSLTGAFKNKKSGGIYRFYKCAGRFRTGICDAPVISEEAI 335 Query: 350 DYNIINELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVA-LSVAPEVTAIAEKI 408 D ++ L ++ E K E LE ++ ++++K + + L +++ Sbjct: 336 DIALMKCLDLPEFDLKYEEQNKIDREQLEKELTKIELKKSRIKELYLDGDISKNEYRKRM 395 Query: 409 RLL--DKELRRASVSLKTLKSKGVNSFSDFYAI----DLTSKNGRELC-RTLAYKTFEKI 461 L D+ + + ++ +++ I + S R+ RT+ KI Sbjct: 396 DSLIDDEIRIQKKLEIEEIEATYEEVLEWMSLIKESWNELSFETRKAAIRTIFSSLTVKI 455 Query: 462 IINT 465 I + Sbjct: 456 IKDP 459 >UniRef50_Q892F0 DNA integration/recombination protein n=1 Tax=Clostridium tetani RepID=Q892F0_CLOTE Length = 499 Score = 216 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 90/505 (17%), Positives = 185/505 (36%), Gaps = 65/505 (12%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 +A+AY RFSS Q +S+ Q I ++ N+ Y D +S G+ + + Sbjct: 7 RAVAYARFSSDNQRE-ESIEAQIMDIKKYALKNN--ITVLREYVDEAIS---GRTFERKS 60 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F ++ + +LV +DR +R + AI + ++ H I + + Sbjct: 61 FKRMIEDAKK---NMFDLILVHKVDRFARNRYDAAIYK-SILKKHNIKIKYVMQPID--- 113 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 + P + ++ A SE ++ V K + A +G P + + Sbjct: 114 ---DSPEGNLMEGILESFAEYYSENLANEVMKGLKINAKKAQFNG----GYPPLGYDIAE 166 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 +T ++ + + + IF L ++ IA LN+ KN GK + + I +L Sbjct: 167 DKT-YIINEREARIVREIFDLYLDGIGYKKIADILNNKGYKNKRGKPFVF--NSIPTILK 223 Query: 243 NKALIGICVPSYRARG--------------KGISEIAGYYPRVISDDLFYAVQEIRLAPF 288 N GI + +R + I + P++IS + F Q+ Sbjct: 224 NDKYCGIYTYNKTSRKYKNGRRNLKKYNKDEDIIRVEDGIPKIISKEKFNTAQQEIKKRT 283 Query: 289 GISNSSKNPMLINLLRTVMKCEACGNTMIVHAVS----GSLHGYYVCPMRRLHRCDRPSI 344 S K + +L ++KC C M +A + + YY C SI Sbjct: 284 K-SRGKKIAVREYILSGLIKC-ECERKMSGYAQKRSKESNRYFYYRCTG------CNNSI 335 Query: 345 KRDLVDYNI-----------INELLFNCSKIQPVENKKDANET--LELKIIELQMKINNL 391 + + ++ I+ L+ K + + +E L+ ++ +INN+ Sbjct: 336 RAEKIETIATNFIKEQVFRDIDNLIIKIHKYIADQEAESPSELKYLKNELSNSNNQINNI 395 Query: 392 IVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDF--YAIDL-TSKNGRE 448 + +S +A+K+ L+ + + + V + + ++L S + + Sbjct: 396 VKMISNGVTSMHLAKKLEELETYIDGIQQRIGEINRMSVIPEDEIKNWLLELKNSFDNGK 455 Query: 449 LCRTLAYKTFEKIIINTDNKTCDIY 473 + + + I I ++ D + Sbjct: 456 NIKKIISVFIKNIEITKEDINIDFF 480 >UniRef50_A5N289 Putative uncharacterized protein n=3 Tax=Firmicutes RepID=A5N289_CLOK5 Length = 550 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 86/529 (16%), Positives = 183/529 (34%), Gaps = 84/529 (15%) Query: 2 KKAIAYMRFSSPGQMSGDS--LNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 K Y R S +++GDS + Q+ ++ ++ + N + + Y D G+S Sbjct: 21 KITALYCRLSRDDELAGDSNSIVNQKAILKKYAEDNG--FRNIEFYVDDGVSGTT---FD 75 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 F+ + +E G I T++++ + R R+ + + + I + N + Sbjct: 76 RPDFNRMIADVESGRIG---TIIIKDMSRFGRDYLKVGYYTEIMFPEADVRFIAIN-NGI 131 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 + + + ++ I+ A + S +++ +K K +SG + + P Sbjct: 132 DSANQADSDFTPFLNIINEWYAKD----TSKKIRAVFKSK----GQSGKPLCTNPPYGYI 183 Query: 180 LD-DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFS------------ 226 D + + ++ D + + IF+L M IAK L + + Sbjct: 184 KDPEDKLHWIIDEKAAEVVRDIFRLCMAGFGPTQIAKQLEKRCIDTPTVHLRKMGINTPA 243 Query: 227 ---GKESAWGPSVIEKLLANKALIGICVP------------SYRARGKGISEIAGYYPRV 271 AW + +LA +G V + + + Sbjct: 244 RPPENPYAWSARTVADILAKMEYLGHTVNFKTSKKSYKSKVKIMNNPEEWLVFKNTHEAI 303 Query: 272 ISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLH--GYY 329 I + + VQ+IR S + +L +M C CG + G H Y+ Sbjct: 304 IDEGTWETVQKIRDGKRRPSRLGEMG----MLSGMMFCADCGAKLYQVRGKGWTHDKEYF 359 Query: 330 VCPMRRLHR--CDRPSIKRDLVDYNIINEL--LFNCSKIQPVENKKDANETLELKII-EL 384 VC R + C I+ +V+ ++ +L + + +K E + E ++ EL Sbjct: 360 VCATYRKKKGMCSSHQIRNVVVEQLLLEDLRRVTSFAKDHEQEFIRIVMNNSEKELAKEL 419 Query: 385 QMKINNLIVALSVAPEVTAIAEKI-------------------------RLLDKELRRAS 419 + A + ++ I K+ + L++++ Sbjct: 420 RQSQKEYEQAQTRIADIDKIIRKLYEDNVMGKIPEERFYKMSAEYEAEQKALEEKITELK 479 Query: 420 VSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNK 468 ++ T + +N+ F A+ EL + + +KII+ K Sbjct: 480 HTIDTANEQSLNT-DRFLALVKKYTEITELDAEIIREFIDKIIVFKAEK 527 >UniRef50_C0E5J2 Putative uncharacterized protein n=1 Tax=Corynebacterium matruchotii ATCC 33806 RepID=C0E5J2_9CORY Length = 670 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 86/487 (17%), Positives = 180/487 (36%), Gaps = 63/487 (12%) Query: 2 KKAIAYMRFSSPGQM------SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKG 55 K+AI+Y+R S+ GQ G S+ QR + + D G SA Sbjct: 8 KRAISYIRVSTHGQASRGDAAEGFSIPAQREANKRKASQLGALII--KEFIDRGESARSA 65 Query: 56 KHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLC 115 K L I+ ++V LDRL+R +V + ++ ++ + +I+ Sbjct: 66 K---RPELQNMLGYIKEH--PEVDYVIVHKLDRLARNRVDD-VDINRVFDECNVRLISTS 119 Query: 116 DNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTI-MTASC 174 +N P S++ +++ A S V +K ++ +G + Sbjct: 120 ENIDQT------PGSMLLHGIMSAIAEFYSRNLGHEVTKGMSQKAKNGGTNGRATLGYVN 173 Query: 175 PRWLSLDDKRTAFV-PDPDRVKTIELIFKLRMER-RSLNAIAKYLNDHAVKNFSGKESAW 232 R + D K TA+V DP+R I F+L ++ +A +L + + + Sbjct: 174 KRGKNGDGKDTAWVEIDPERGPHITEAFRLYATGDWTVAKLAAHLEAAGLTSRATSRHPS 233 Query: 233 GP---SVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFG 289 P + + +L N G+ V +E G +P +I + + VQ + + + Sbjct: 234 RPLGKNQLLGILRNPYYRGVVVYQ-------GAEYPGKHPALIDTETWLLVQSVLTSHY- 285 Query: 290 ISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGS---LHGYYVCPMRRLH--RCDRPSI 344 + +N + L+T ++C CGN + + + + Y+VC R H +C + Sbjct: 286 --HGERNRTHNHHLKTTVRCGLCGNRLTIQNSTNRHDTTYAYFVCRYRSRHQPKCGFHAA 343 Query: 345 KRDLVDYNIINELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTAI 404 D VD + ++ +I + + +E ++ +++ + + A Sbjct: 344 LIDAVDEQV--AGIYKTIRITTGQRQH-----IEKHLL---AELDRIYAQQAAAS----- 388 Query: 405 AEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIIN 464 + L + R L ++D ++L + + + R + E Sbjct: 389 ----KNLTNQRERLKAEQAKLLQA---HYADAIPLELMKQEQQRITRQICTIDKEIAGYT 441 Query: 465 TDNKTCD 471 + + + Sbjct: 442 ANRQQVE 448 >UniRef50_D1PSJ0 TnpX site-specific recombinase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSJ0_9FIRM Length = 559 Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 100/551 (18%), Positives = 184/551 (33%), Gaps = 103/551 (18%) Query: 5 IAYMRFSSPGQMSGDS--LNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 Y R S +MSG+S + QR ++ ++ K + + + + D G + G + A Sbjct: 11 ALYGRLSRDDEMSGESMSIQSQRAILGQYAKEHG--FTNCRFFMDDG---YSGTNFDRPA 65 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F E ++ ++ G + T+LV+ L RL R + + + + I + D + Sbjct: 66 FIEMMELVQQGRVK---TILVKDLSRLGRNYLEVGRYTEVIFPEYKVRFIAITDGVDSAV 122 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 ++ K I+ A + S +VK ++K K G A P D Sbjct: 123 GE--NEFAPFKNIINEWYAKD----ISRKVKSAFKAKALR----GEYTGAYPPYGYDRDP 172 Query: 183 -KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSG-------------- 227 R VP+ I IF++ +E ++ IA+ L + Sbjct: 173 ADRHKLVPNQY-SSVIGEIFRMALEGKTCGQIARELERQQILRPQAYLHEKFGKFVSDRI 231 Query: 228 --KESAWGPSVIEKLLANKALIGICVPSYRARGKGISE------------IAGYYPRVIS 273 AW S + +L N+ IG V + + G + ++ Sbjct: 232 LQYPFAWDHSSVRAILMNQVYIGNMVHFRTGSKNFKEKKLIWKPETDWIVVEGTHEPLVD 291 Query: 274 DDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLH----GYY 329 + F+ VQE + K N+ R ++ C CG M G + Sbjct: 292 AETFWTVQE----RVKVKQPRKRCCNANIFRGLLFCGECGKRMAFCNRKNEKRRKSLGSF 347 Query: 330 VCPMRRLHR---CDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLELKIIELQM 386 C R + C I + V ++ ++ N + + + + + ++L Sbjct: 348 SCNTNRRYGGKFCTTHYITLEQVKSIVLEDIRRN-AMLASEDTGRYIDYLMQLSKAGQAD 406 Query: 387 KINNLIVALSVA----PEVTAIAEKI-------------------------RLLDKELRR 417 +IN L L + E+ + ++I + L Sbjct: 407 EINALKKELETSRHRLAELATLVQRIYEDHVFDRLPEELYQTLSAKYEAETKNLKARTAE 466 Query: 418 ASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNG 477 L SK NS DF A+ + EL L + EKI+I Sbjct: 467 IQTQLAESASKTQNS-RDFAALVAPYADITELDEELVHTLIEKIVI-----------HEK 514 Query: 478 IVFKHYPLMKV 488 + P+M++ Sbjct: 515 EILDGLPVMRI 525 >UniRef50_A8SHS6 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SHS6_9FIRM Length = 564 Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 82/530 (15%), Positives = 177/530 (33%), Gaps = 83/530 (15%) Query: 4 AIAYMRFSSPGQMSGDS--LNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 Y R S+ + G+S + Q+ L+ +++ +D TY D G + G + Sbjct: 8 VGIYCRLSNDDERDGESVSIENQKLLLQNYVRQRGWNEVD--TYIDDG---YSGTNFDRP 62 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 ++ + I +LV+ L R R + L + G I L + + Sbjct: 63 GVKRLIEDAKAKRI---NVILVKDLSRFGRNYIEFGQYTDYLFPSLGCRFIALNNG--ID 117 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 +S N ++ + + S K ++ E+G M D Sbjct: 118 TESTNGSTDVMCFLNLFNEFY------SRDTSKKVKAVKKACAENGKFMGTYPAYGYKRD 171 Query: 182 D-KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKN-------------FSG 227 + V D D + IF++R +AIA LN+ + + Sbjct: 172 PADKHHLVIDEDTAPVVRRIFEMRAAGTGFHAIAVTLNEEGIPSPGVLYYQRKGQSDPRR 231 Query: 228 KESAWGPSVIEKLLANKALIGICVPS------YRAR---GKGISE---IAGYYPRVISDD 275 W ++ ++ ++ IG V Y++R GK E + G + +IS + Sbjct: 232 VNHKWADQTVKNIVRSEVYIGNMVQGKTGTMSYKSRKLVGKPEEEWIRVQGTHEPIISQE 291 Query: 276 LFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTM-------IVHAVSGSLHGY 328 L+ V I S+++ ++ ++ C CG M + + Sbjct: 292 LWDTVASIDKKKVRKSSAADGYK--SIFTGLVYCADCGFKMRNHVERFTYKDGTPGRYSS 349 Query: 329 YVC---PMRRLHRCDRPSIKRDLVDYNII--------------NELLFNCSKIQPVENK- 370 ++C C +I +++ ++ +L+ +++ E K Sbjct: 350 FICGNYSRSGKGACTVHTIYENVLTQLVLEDIREKAHFAEYDPEQLIQQIIRLKDKEAKS 409 Query: 371 -----KDANETLELKIIELQMKINNLIVALSVAPEVTAIAEKI-RLLDKELRRASVSLKT 424 + +T ++ EL+ + NL + + + + E S ++ Sbjct: 410 RLSSCEQELKTYTARLSELERLMQNLYEDKCAGTIPQTVFQTLMHKYEAERAEKSEAIPE 469 Query: 425 LKSKGVN------SFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNK 468 L+ K + + + I EL ++ ++ ++I + K Sbjct: 470 LEHKVKSYLENRTDANRWLTIIRRYTEITELDESILFELVDRIEVGETKK 519 >UniRef50_Q041M6 Site-specific recombinase, DNA invertase Pin related protein n=15 Tax=Bacilli RepID=Q041M6_LACGA Length = 553 Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 77/465 (16%), Positives = 165/465 (35%), Gaps = 48/465 (10%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 + AY R S+ +SL QR +++ + ++ L I Y D G+S K + A Sbjct: 18 RVAAYCRVSTDNIEQLESLENQREHYQKYISNHPNWQLAKIYY-DEGISGT--KLTKRDA 74 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 E L + I ++ +S+ RLSR + + ++ + I +I ++ I Sbjct: 75 LKELLADCHNHLI---DLVVTKSISRLSRNT-TDCLRIVRELQQLNIPIIFEKEH----I 126 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 ++ L +IL + A +ES + ++ + +++ SG +S P S++D Sbjct: 127 NTGAMASELFLSIL-SSIAQDESHSTAGNLRWAIRQR----FASGEFRVSSAPYGYSIED 181 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 V + + + IF+ + S + IAK LN V G W + + +L Sbjct: 182 GN--LVINQAEARIVREIFQQFSKGMSASRIAKGLNHKHVATKHG--GQWRSNTVINILR 237 Query: 243 NKALIGI-----------CVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGI- 290 N G + I ++P +++ + F VQ + Sbjct: 238 NSNYTGDMLCQKTYSDDQYHRHFNQGELTQYLIEDHHPSLVNHETFNRVQVLLKEAVQKC 297 Query: 291 --SNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDL 348 S L + C CG + + +C ++ Sbjct: 298 HIETGSHKYQHHYLFSGKITCGNCGTIFKRQTRPNKICWACQRHLSSAKQCTVKAVTEVS 357 Query: 349 VD---YNIINELLFNCS----------KIQPVENKKDANETLELKIIELQMKINNLIVAL 395 ++ N++N+L+++ ++Q + +L ++ K L + Sbjct: 358 LEAAFCNMMNKLIYSRKFLLQPLLANLQVQANSDTNGQLSSLVNQVKANDRKAETLTELM 417 Query: 396 SVA-PEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAI 439 + + L+++ + +K S +S ++F + Sbjct: 418 QSGLLDKAIYVNQTAQLEQDTYQCREKIKQFNSNNTDSANNFENV 462 >UniRef50_C0WGL8 Site-specific recombinase n=1 Tax=Corynebacterium accolens ATCC 49725 RepID=C0WGL8_9CORY Length = 494 Score = 214 bits (544), Expect = 8e-54, Method: Composition-based stats. Identities = 88/505 (17%), Positives = 184/505 (36%), Gaps = 58/505 (11%) Query: 8 MRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFSEFL 67 R S+ + S + Q ++ ++ + L I Y D G++ KH F + + Sbjct: 6 ARVSTDLEEQQSSYHAQVDYYTRYINEHAGWQLVGI-YTDEGITGTSTKH--REGFKQMI 62 Query: 68 DAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDSLNE 127 G I ++ +S+ R +R V + + ++L+ + G++V +N I +L+ Sbjct: 63 TDALDGKI---DLIITKSVSRFARNTV-DTLTHVRLLKDRGVEVYFEKEN----IWTLDS 114 Query: 128 PYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDKRTAF 187 L+ I+ + A EES S V +K+ ++ ++ Sbjct: 115 KGELLITIM-SSLAQEESRSISENVTWGHRKR---FVDGKVMVPYKSLLGYKKGADGN-L 169 Query: 188 VPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLANKALI 247 D +R + I+ L + +S+ I L GK + W + +L+N+ Sbjct: 170 AIDEERAPVVREIYGLFLAGKSIREIKDTLETEGHLTPRGK-TTWHVTTTRSILSNEKYK 228 Query: 248 G--ICVPSYRAR------GKGISEIAGYYP-----RVISDDLFYAVQEIRLAPFGISNSS 294 G + +Y A + E+A YY +I ++ VQ G + S Sbjct: 229 GDALLQKTYTADFLTKTIKRNDGEVAQYYVTGNHAPIIGPEVRDQVQYELATRHGEGSGS 288 Query: 295 KNPMLINLLRTVMKCEACGNTMIVHAVSG--SLHGYYVCPMRRLHR--CDRPSIKRDLVD 350 K ++L + +KC CG S + H + C + C P+++ + Sbjct: 289 K----LHLFSSRLKCADCGGWYGRKTWSSTTNKHTVWHCNNKHAGDQVCATPTLRDHQIK 344 Query: 351 YNIINELLFNCSKIQPVENKKDAN-----ETLELKIIELQMKINNLIVALS--------V 397 + L ++ ++D + LE + +L + L A + V Sbjct: 345 TAFLTALSQLGPALEAPSLREDLAAVFDTKQLEAEREDLAERQAELEAAFTAMVAHNQHV 404 Query: 398 APEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAI----DLTSKNG-RELCRT 452 A + ++I+ ++ + A+ LK L+++ A+ D S+ T Sbjct: 405 ATDQDEYTKQIKRIETDYNHATDRLKNLETQSNERQVKHNALLAAYDQLSRAPVSTFQPT 464 Query: 453 LAYKTFEKIIINTDNKTCDIYFMNG 477 ++ + + +F +G Sbjct: 465 QWTALIDQTTVR--EEAIKFFFRDG 487 >UniRef50_Q9XJF6 Site-specific integrase n=3 Tax=root RepID=Q9XJF6_9CAUD Length = 464 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 89/496 (17%), Positives = 185/496 (37%), Gaps = 54/496 (10%) Query: 1 MKKAIAYMRFSSPGQM-SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 MK+A Y+R S+ Q G S+ Q + + K Y D G F G + Sbjct: 1 MKRAALYIRVSTMEQAKEGYSIPAQTDKLKAFAKAKD--MAVAKVYTDPG---FSGAKME 55 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 A E + I++ I +LV LDRLSR + + L + +D I++ ++ Sbjct: 56 RPALQEMISDIQNKKI---DVVLVYKLDRLSRSQKNTLYLIEDVFLKNNVDFISMQESFD 112 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 + P+ +++ A E + + R+ + ++ + G + P Sbjct: 113 TST-----PFGRATIGMLSVFAQLERDTITERMHMGRTERAKQGYYHG---SGIVPLGYD 164 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRM-ERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIE 238 + + + I+ I+ L + + + I K + V + K ++++ Sbjct: 165 YV--HGELIINDYEAQIIQEIYDLYVNQGKGQQYITKRM----VAKYPDKVK--TLTIVK 216 Query: 239 KLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPM 298 L N IG + G++ +I ++ QEI +A ++ Sbjct: 217 YALTNPLYIGKISWDGKVY-------DGHHSPIIDKSMYDKAQEI-IARMAQKGGEQHGN 268 Query: 299 LINLLRTVMKCEACGNTMIVHAVSGSLHG--YYVCPMRRL--------HRCDRPSIKRDL 348 + LL + C CG + + G + YY+C + C +PS+++++ Sbjct: 269 QLGLLLGITYCGKCGAEVFRYVSGGKKYRYNYYMCRSVKKMLPSLVKDWNCKQPSLRQEV 328 Query: 349 VDYNIINELLFN-----CSKIQPVENK-KDANETLELKIIELQMKINNLIVALSVAP-EV 401 V+ +I+ L +++ VENK K T+ +I + + ++ +V Sbjct: 329 VEKKVIDSLKSLDFKKIERELKQVENKTKSKITTINNQISKKHNEKQKILDLYQYGTFDV 388 Query: 402 TAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCR---TLAYKTF 458 T + E+++ +D E+ + ++ L+ S + T E + + Sbjct: 389 TMLNERMKKIDNEINALTANIANLEGTKSESLINKLETLKTFNWETETTENKILIIKEFV 448 Query: 459 EKIIINTDNKTCDIYF 474 E+I + D F Sbjct: 449 ERIELFDDEVIIKYKF 464 >UniRef50_B8FU52 Resolvase domain protein n=2 Tax=Clostridiales RepID=B8FU52_DESHD Length = 526 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 82/425 (19%), Positives = 162/425 (38%), Gaps = 42/425 (9%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 + AY R SS +S Q + + + + L I Y D G++ + Sbjct: 28 RVAAYARVSSDSDDQQNSYIAQVDYYTKNIATHEGWELADI-YADEGITGLVAS--KRDD 84 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F+ + G I +LV+S+ R +R E I+ ++ +L GI + +N I Sbjct: 85 FNRMIQDCRDGKI---DRVLVKSISRFARNT-KEYIQYVRELLRLGISIHFEKEN----I 136 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 D+ I A + + ES+ S+ +++S + + +E GT ++ S P L++ Sbjct: 137 DTGKMTSEQI-ATIYGAFSQMESQNHSNNMRISVRMR----MEKGTYISPSTPYGYKLEE 191 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 + A V P++ + + IF + + IA LN + + W + I +L Sbjct: 192 R--ALVIIPEQAEVVRRIFTAYLSGQGKEDIANELNRMGIP-RTKDRKMWYSTTIGYILT 248 Query: 243 NKALIGICVPSY----------RARGKGISE---IAGYYPRVISDDLFYAVQEIRLAPFG 289 N + G V + R KG + + ++S D F VQ + Sbjct: 249 NISYTGDMVWQKSFATNDIPFRQVRNKGEKPKYFVENCHEPIVSQDEFQRVQALLETRRL 308 Query: 290 ISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHR--CDRPSIKRD 347 + + LL+ + C CG V+ + Y+ C H+ C + + Sbjct: 309 QIAGT---VSSALLKKKLHCGNCGTLFRRKIVNEKV--YWACRRHDSHKDLCPISQVPEE 363 Query: 348 LVDYNIINELLFNCSKIQPVENKKDANETLELKIIEL--QMKINNLIVALSVAPEVTAIA 405 + I+ + + + ++ EL+ EL KIN++ ++ E + Sbjct: 364 QIITAIL-RMYHKLKRHREQILSPLLSQLTELREKELRSNRKINDIDKEIAQLTEQNLVL 422 Query: 406 EKIRL 410 +++ Sbjct: 423 VRLKS 427 >UniRef50_B0NAW3 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0NAW3_EUBSP Length = 585 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 88/505 (17%), Positives = 165/505 (32%), Gaps = 64/505 (12%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLK-VNSDYYLDTITYEDLGLSAFKGKHAQ 59 ++ Y+R S+ Q+ DSL Q++ + + K V +ED G S GK+ Sbjct: 19 LRTVALYVRVSTGYQVDKDSLPFQKKELKNYCKHVLHIDESRIEIFEDAGKS---GKNTN 75 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 AF + + G I + ++V +DR+SR V ++ + + I+L + Sbjct: 76 RPAFERMMKKVRAGQI---SHVIVYKIDRISRNLVDFSL-MYDDFKYNRVTFISLNE--- 128 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 D+ + + I++ A E ++ S RV + +G A P Sbjct: 129 -QFDTSSAIGEAVLKIIL-VFAELERKLASERVMDIMIGRALSGQWNG----ARVPFGWD 182 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEK 239 D++ L++ + E RS + Y N H + G E W + Sbjct: 183 WDEEAKFPKHSEVEAVFGRLMYDMYEETRSTCKVRDYNNTHDIPTKRGGE--WTSKTVAD 240 Query: 240 LLANKALIGICVPSY----RARGKGISEI---AGYYPRVISDDLFYAVQEIRLAPFGISN 292 + N G +Y R R K E+ G +P ++ + + I Sbjct: 241 FIRNPINRGDYRYNYRESARGRKKPEEEVIYLEGVFPPLVPPEQWDRCNAIMDENAAKKR 300 Query: 293 S---SKNPMLINLLRTVMKCEACGNTM-IVHAVSGSLHGY----YVCPMRRLHR-CDRPS 343 S S + ++ ++ C CG ++ +G+ Y C R R C+ P Sbjct: 301 SAGFSHKRIHVHAFAGLLVCGDCGAFFQVIKKDKTRENGFSPSLYRCGARYRKRACNSPG 360 Query: 344 IKRDLVDYNIINEL---------LFNCSKIQPVENKKDANETLELKIIELQMKINNLIVA 394 ++ + N + S + +E E +N Sbjct: 361 CSDVVLGPFVFNYISGMVRVASMRSKISSPEELEQLLLTGPEFEAVAGIASEGLNATFAL 420 Query: 395 LSVAPE------VTAIAE---------KIRLLDKELRRASVSLKTLK-----SKGVNSFS 434 LS P V + ++ L +++ R +L+ LK Sbjct: 421 LSGRPATGGAAYVPDLLAAPSGCINTGEVEELKQKITRIERALERLKKAFLFDDQAMGEK 480 Query: 435 DFYAIDLTSKNGRELCRTLAYKTFE 459 ++ L + R E Sbjct: 481 EYLETKLALETERIAAENRMKDLNE 505 >UniRef50_C6JGM7 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGM7_9FIRM Length = 535 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 91/539 (16%), Positives = 211/539 (39%), Gaps = 81/539 (15%) Query: 5 IAYMRFSSPGQM---SGDSLNRQRRLIAEWLKVNSDYY-LDTITYEDLGLSAFKGKHAQS 60 + Y+R S + +S+ QR +I +++ +++ + + ++D G + G + Sbjct: 8 VKYLRLSLEDEDMLDESNSITNQRIVIGQYIASKNEFKNTEVLEFKDDG---YSGTNFDR 64 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 F ++ + G + +T++V+ L R R + ++ + I + DN Sbjct: 65 PGFQSMMELVRDGKV---STIIVKDLSRFGRNHIEVDTYLEQIFPFMNVRFIAINDN--- 118 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPR-WLS 179 +DS+ + I + R N +E S + K+ ++G M A P +L Sbjct: 119 -VDSMKYESG-MPGIDVGFR-NIINEHHSIDTSVKVKRTLIQRQKAGKYMGARAPYGYLK 175 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNF-------------- 225 D+ T+ V +P+ +++IF+ ++ ++ +A+YLN+ + + Sbjct: 176 PDEDVTSLVINPETAPVVKMIFQKYLDGMNITQLARYLNEQKIMSPGQYKREVLKTGVKK 235 Query: 226 SGKESAWGPSVIEKLLANKALIGICVPSY------------RARGKGISEIAGYYPRVIS 273 + ++ W P + +L + G + + + + + G + ++S Sbjct: 236 TTEKYIWYPVTVRLILMTETYTGTTIGGKWKVASVGSNKHLKTKEEDWIVVEGTHEAIVS 295 Query: 274 DDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPM 333 ++F AVQE + + N L+ ++KC CG + H + H + CP Sbjct: 296 KEVFDAVQEKLELNSRKRSKTHNNN--YPLKGLVKCGGCGQNLQ-HVTRCNPH--FKCP- 349 Query: 334 RRLHRCDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIV 393 R+ + ++ + +L D NE++F K+ + DA LEL+ EL+ K+N Sbjct: 350 RKFNVANQDCVTDNLYDDE-FNEMIFRAIKL-FAKISDDAEPVLELQKAELKSKVNGAAK 407 Query: 394 ALSVAPEV----------------------TAIAEKIRLLDKELRRASVSLKTLKSKGVN 431 + A + K LDK++ + ++++ ++++ Sbjct: 408 KIRDAKDSISRYKHQKTELYMRYAMEEISEEEFTRKNDKLDKQIEKETLAIAQMETEQSE 467 Query: 432 SFSDFYAIDLTSKN--------GRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKH 482 + + + + ++L R +A I + D + + + K+ Sbjct: 468 AAERLFELPPDGRQCLTDLIEGNKQLTREIAVTFIRGIKVYNDKRIEIEWNFADELVKY 526 >UniRef50_A7VWP7 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VWP7_9CLOT Length = 509 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 100/506 (19%), Positives = 181/506 (35%), Gaps = 69/506 (13%) Query: 4 AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAF 63 + Y R+S Q +S+ Q ++ + + Y Y D LS F Sbjct: 3 VVIYARYSDSKQRE-ESIEAQLKVCHAYAESKG--YTVIREYIDRALSGRSD---DRPQF 56 Query: 64 SEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNID 123 + E +LV LDR SR++ AI + + + +G+ V + +N Sbjct: 57 QLMIKHSERKQFQK---VLVYKLDRFSRDEYDPAIYKAQ-LRKNGVKVESATENIPD--- 109 Query: 124 SLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL--- 180 N LI+A++ A S +VK + + + L +G + P L Sbjct: 110 --NSFGILIEALISGNNA-SYSVELREKVKRNLELNAEKCLSNG----GTTPLGYKLVRL 162 Query: 181 ----DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSV 236 + + +V + + T++ +F S+ I LN +K S + +A+ S Sbjct: 163 NPNEEKSKKKYVINEETAPTVQEVFTKYANGWSIKEICDSLNARGLK--SAQRAAFNKSS 220 Query: 237 IEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKN 296 + +L N+ +GI + EI G P++I +DLF V E ++ Sbjct: 221 LHTMLCNRKYLGIYIYD-------GIEIPGGMPQIIDEDLFNKVAEKMKLNKKNPGRAR- 272 Query: 297 PMLINLLRTVMKCEACGNTMIVH-----AVSGSLHGYYVCPMR-RLHRCDRPSIKRDLVD 350 +L T + C C M+ H + G + YY C R C + + +D ++ Sbjct: 273 AKAEYILTTKLFCGYCKEKMVGHSSNQISKKGIIFNYYKCKNSGRNKPCKKKMVHKDYIE 332 Query: 351 YNIINE------------LLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVA 398 II E + KI + + A LE I + Q + N + +L Sbjct: 333 DIIIMECRKLLTPENISRIAKEVVKIAQSFDDRSALHRLESLIQKAQEEKENQMTSLRAC 392 Query: 399 PEVTA----------IAEKIRLLDKELR-RASVSLKTLKSKGVNSFSDFYAIDLTSKNGR 447 + T I +I+ L+K++ + + V+ D+ R Sbjct: 393 KDDTIREMIFEDLGRIGAEIKELEKQIEIEKERHYVVTEQQVVDHLKSLADGDIKDITYR 452 Query: 448 ELCRTLAYKTFEKIIINTDNKTCDIY 473 ++L KI + D T Sbjct: 453 ---KSLIRLFVNKIFLYDDKFTITFN 475 >UniRef50_B6FLM9 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLM9_9CLOT Length = 569 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 82/435 (18%), Positives = 148/435 (34%), Gaps = 58/435 (13%) Query: 5 IAYMRFS---SPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 Y R S S D + Q + ++ Y Y D G G Sbjct: 26 AIYARLSVENSGKSEKVDVITNQIEICKSYIAGCP-YLDLVDVYVDNGR---TGTVFDRP 81 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F+ + I+ G I L+V L R R+ + ++ G+ I + ++ N Sbjct: 82 EFNRLMTDIKSGRIK---CLVVRDLSRFGRDYIETGTYLERIFPQIGLRFIAIKEHYD-N 137 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 D+ L+ + A S+ S +V + K + +E GT + P + Sbjct: 138 FDTDGSNEGLMIPLQNMINA-LYSKDISRKVSTALKAQ----MEQGTFQKRNLPYGYRWN 192 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKE------------ 229 + T V D + + + L+F+ ++E S+ I L+ N ++ Sbjct: 193 EDHTNMVIDEETAQYVRLMFQWKIEGWSIPTILNELDRLGAPNTELRKRQNGTRKGDGCS 252 Query: 230 -SAWGPSVIEKLLANKALIGICV------------PSYRARGKGISEI-AGYYPRVISDD 275 W S + +L+N +G V S+ + K + + +IS + Sbjct: 253 CKGWYSSTLYGILSNPQYVGDTVLGRSMKAIYKGIKSHNVKDKDKWIVFPNTHEALISRE 312 Query: 276 LFYAVQEIRLAPFGISNSSKNP------MLINLLRTVMKCEACGNTMIVHA------VSG 323 F VQ+I A +S L+NL + C CG M H Sbjct: 313 DFQKVQDILQAASEARQTSMQKTEEIRATLVNLFEGKIVCADCGKKMYFHRKRIDKDKRK 372 Query: 324 SLHGYYVCP---MRRLHRCDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLELK 380 + YY C RR C ++D ++ N++ + + D E + Sbjct: 373 RWYAYYECSTSVGRRYEHCTSHYTRQDTLEANVLAAIQLQVEAALDYDKLLDKLRGSEGE 432 Query: 381 IIELQMKINNLIVAL 395 ++ + N LI +L Sbjct: 433 -KNIRDQQNALITSL 446 >UniRef50_C0B9J7 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0B9J7_9FIRM Length = 557 Score = 213 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 105/530 (19%), Positives = 188/530 (35%), Gaps = 84/530 (15%) Query: 4 AIAYMRFSSPG------QMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKH 57 A Y+R S + +S+ QR L+ ++K D + I Y D G + G + Sbjct: 14 AALYLRLSKDDMEEGGAKSESNSIANQRELLRSFVKSQPDIQIFDI-YVDDG---YSGGN 69 Query: 58 AQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDN 117 F IE G + ++V+ L R RE + K + I++ D Sbjct: 70 FDRPEFKRMTTDIEAGKV---NCVIVKDLSRFGREYIEAGRWIEKTYPALNVRFISVTD- 125 Query: 118 TVYNIDSLNEPYSLIKAILIAQRANEESEIK--SSRVKLSWKKKRQDALESGTIMTASCP 175 DS +S ++ + ES + S +V+ K KR+ G + A P Sbjct: 126 ---QFDSKTADFSEKSFVVPIKNFVNESYCRDISGKVRSHQKIKREK----GEFIGAFAP 178 Query: 176 RWLSLD-DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESA--- 231 D + + V D + IF +++ SL AIA+ LN V++ + A Sbjct: 179 YGYCKDPENKNCLVIDSYASDIVRKIFSWKIDGFSLGAIAEKLNVRHVQSPKEYKKANGE 238 Query: 232 -------------WGPSVIEKLLANKALIGICVPSYRARGKGI------------SEIAG 266 W I+++L N+ IG V + R ++ Sbjct: 239 NYNSGFHSSDTPKWSAVQIKRILTNEVYIGNMVQGKQERISYKVKQRLDKPESEWVKVEN 298 Query: 267 YYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMI--VHAVSGS 324 +P +I + F VQ++ +SK N + C C MI V+ G Sbjct: 299 THPAIIRQNDFDVVQKLLQYD---GRASKTSDSANFFSGFVFCGDCHTPMIRRVNQYKGK 355 Query: 325 LHGYYVCPMR-RLHRCDRPSIKRDLVDYNIINELLFNCS----------KIQPVENKKDA 373 +Y+C + + C R SI +++ ++ E+ + ++ ++ D Sbjct: 356 KKAFYICQTKNKGGDCTRHSIPEEVLKRIVLKEIQAYTALFVDYQMIMEELCEMKVSYDQ 415 Query: 374 NETLELKIIELQMKINN---------------LIVALSVAPEVTAIAEKIRLLDKELRRA 418 + +I +LQ + N LI + K L++ + Sbjct: 416 VIGYDTQISKLQEEYNRYYSLKASLGDDLKEGLISKEEFDDFRESYGRKCEELEQMIENQ 475 Query: 419 SVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNK 468 +K + GV++ S +EL RTL T +KI I + + Sbjct: 476 KKLVKQMFEGGVSATVQLEDW-KKSLEIKELDRTLLALTVDKIYIYENKQ 524 >UniRef50_B2IQ45 Site-specific recombinase, resolvase family n=19 Tax=Firmicutes RepID=B2IQ45_STRPS Length = 597 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 95/516 (18%), Positives = 189/516 (36%), Gaps = 71/516 (13%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 +K+ AY R SS + +S + Q R E++ SD+ L I Y D G+S + + Sbjct: 26 LKRVAAYCRVSSDSEDQKNSYDSQVRHYKEYISQRSDWELADI-YADEGISGTQ--VGKR 82 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 F ++ +G I ++ +++ R +R + + ++ ++++ + I V +N Sbjct: 83 QDFQRLINDCANGEI---DYIVTKAIARFARNTL-DTLKYVRMLKDMQIGVYFEEEN--- 135 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 ID+L L+ IL + A +E E S+ VK K K Q G ++ Sbjct: 136 -IDTLTMDGELLLTIL-SSVAQQEVENTSAHVKKGLKMKMQR----GELVGFQGCLGYDY 189 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 D + + K + IF+ +E IA+ L++ K+ G E W + + + Sbjct: 190 DVETKQISINKKEAKIVRYIFERYLEGIGGKVIARELDELGYKSPRGLE-HWNDTTVLGI 248 Query: 241 LANKALIGICVPSYRARGKGISE-------------IAGYYPRVISDDLFYAVQEIRLAP 287 + N+ G + IS+ I + +IS + F QEIRL Sbjct: 249 IKNEKYKGDILMGKTFTVDPISKRRLSNFGEEDKYYIKDNHEPIISKEDFEKAQEIRLRR 308 Query: 288 FGISNSSKNPMLI-------NLLRTVMKCEACGNTM---IVHAVSGSLHGYYVC--PMRR 335 G ++ N ++++C CG+ + H S + C +++ Sbjct: 309 AGNKKTAANVNGKRERYSKMYAFSSMLECGFCGSILSRRSWHCRSDYRKVVWHCVTSIKK 368 Query: 336 LHRCDRPSIKRDLVDYNIINELLFNCSKIQPVENKK---DANETLELKIIE--LQMKINN 390 + + S ++ I + N+ D ET+E ++ + L ++ Sbjct: 369 GKKFCKHS---KGLEEIAIEGAFLEAYRQVYHSNENLMTDLLETIESELNDNSLNKELKR 425 Query: 391 LIVA---------------LSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNS--- 432 + L + EK + E + +++ + Sbjct: 426 ITNKLRILLKKEENLVNLRLEGKVSDSIYNEKYNEISSEKEFLAEEKVNIETTLKSEIDV 485 Query: 433 ---FSDFYAIDLTSKNGRELCRTLAYKTFEKIIINT 465 ++F + + K E R + EKII+ Sbjct: 486 KKRLTEFKHLLSSQKMLTEFDRAVFESIVEKIIVGG 521 >UniRef50_Q0AWY2 Site-specific recombinase, putative n=7 Tax=Clostridiales RepID=Q0AWY2_SYNWW Length = 551 Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 90/530 (16%), Positives = 189/530 (35%), Gaps = 85/530 (16%) Query: 2 KKAIAYMRFSSPGQMSGDS--LNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 K Y R S ++ GDS + Q+ ++ ++ N +T + D G + G + Sbjct: 13 KITALYCRLSRDDELQGDSNSILNQKAILQKFAADNGLG--NTQYFVDDG---YSGTNFD 67 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 + + ++ G + T++V+ + RL R+ + + + N I I + + Sbjct: 68 RPDWQRLMALVDEGKVG---TIIVKDMSRLGRDYLKVGMYTEMIFPNADIRFIAINNG-- 122 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 +DS N+ S + ++ S +++ +K K ESG + + P Sbjct: 123 --VDSANQQDSDFTPFINIFNEF-YAKDTSKKIRAVFKAK----GESGKPLCTNVPYGYK 175 Query: 180 LD-DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESA------- 231 D D + ++ D D K + IFKL M+ IAK L + ++N + Sbjct: 176 KDPDDKHHWLVDKDAAKVVREIFKLCMDGYGPTQIAKLLTERRIENPTSHAKRNGLNPPV 235 Query: 232 ---------WGPSVIEKLLANKALIGICVPSYRARGKGISE------------IAGYYPR 270 W + + +L+ IG V R ++ + Sbjct: 236 RQFYDDPYLWRDTTVTHILSRMEYIGHTVNFKTYRKSYKNKKQMHNDPSQWQIFKNTHEA 295 Query: 271 VISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHG--Y 328 +I + +F VQ+IR ++ + P +L ++ C CG + G H Y Sbjct: 296 IIDEAVFEIVQKIRDGRRRVTPLGEMP----ILSGMLFCADCGAKLYQVRGRGWEHSKEY 351 Query: 329 YVCPMRR--LHRCDRPSIKRDLVDYNIINELLFNCSKIQPVENK------KDANETLELK 380 +VC R C I+ +++ +++++ + + E++ + L+ Sbjct: 352 FVCATYRKIKGGCSSHQIRNVVIEEALLDDIRRITAFAREHEDEFLQMVTQKTKSALDRS 411 Query: 381 IIELQMKINNLIVALSVAPEV------TAIAEKIRL----------------LDKELRRA 418 + E + ++ + E+ I KI L++ + Sbjct: 412 LRENKRELEQATQRIRKLDEIIQRLYEDNIEGKISDERFAKMTANYEAEQHTLEQRVAEL 471 Query: 419 SVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNK 468 S+ T K +N+ F + EL + + E++ + K Sbjct: 472 RASIATEKESALNA-DHFLTLVRKYTEIPELTAEIIREFVERVYVYKAEK 520 >UniRef50_C0W970 Site-specific recombinase n=1 Tax=Acidaminococcus sp. D21 RepID=C0W970_9FIRM Length = 545 Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 72/356 (20%), Positives = 138/356 (38%), Gaps = 39/356 (10%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 KK AY R S + SL+ Q ++ ++ N ++ Y D G+S K + Sbjct: 18 KKVAAYARVSMESERMHHSLSAQVSYYSKLIQKNPNWEY-AGVYADYGISGTGIK--KRQ 74 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F L+ E G I +L +S+ R +R V + ++ ++ + GI+V +N Sbjct: 75 EFRRMLEDAEAGKI---DIILTKSIQRFARNTV-DLLQTVRHLKELGIEVWFEKEN---- 126 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 I +++ L+ IL A A EES S +K ++KK + + W Sbjct: 127 IHTMSGDGELMLTIL-ASFAQEESRSISDNIKWRFRKKFEQGIPHAKFFVYG-YCW---- 180 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 ++ V P+ + IF ++ R+ I + L ++ G + + + I ++L Sbjct: 181 -EKDNLVIQPEEAAIVREIFDAYLQGRTRKDILRELKRREIRTMYG--NYFKDASIRQIL 237 Query: 242 ANKALIGICVPSYRARGKGISE-------------IAGYYPRVISDDLFYAVQEIRLAPF 288 N+ G+ I++ + ++ +IS D+F VQ+ Sbjct: 238 TNRIYTGVLEMQKTFVTDPITKRQAVNHGERNRYVVEWHHEAIISSDMFEWVQQELKNRK 297 Query: 289 --GISNSSKNPMLIN--LLRTVMKCEACGNTM--IVHAVSGSLHGYYVCPMRRLHR 338 G+ +N ++KC CG + +V G + Y+ C + Sbjct: 298 EMGMQRGGYARDFLNTSCFTGIIKCGICGKSYVHVVRKYKGRIREYWTCDSHKGKG 353 >UniRef50_B3E518 Resolvase domain n=1 Tax=Geobacter lovleyi SZ RepID=B3E518_GEOLS Length = 544 Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 96/503 (19%), Positives = 191/503 (37%), Gaps = 55/503 (10%) Query: 2 KKAIAYMRFSSPGQMS-GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 +K Y+R S+ Q G+SL+ Q + + + + + Y + G F GK + Sbjct: 9 RKCALYVRVSTINQAEDGESLDEQVQTLKSYCSYRK--WQNCTVYREEG---FSGKDLKR 63 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 AF + + I G I T++V+ +DRLSR + + K + G+D+I+ +N Sbjct: 64 PAFQQMVADIRKGKI---NTVIVKKIDRLSRS-IIDFENVYKSFQDQGVDLISTQENF-- 117 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 D+ + I++ A E E S R + + + +G + Sbjct: 118 --DTSTAIGRSVIRIVLI-FAQLEREQTSERTIDVMAHRAKQGMFNG----GYPRLGYDI 170 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 D + VP+ D + + +F ++ SL+ AK LN+ + + A +K Sbjct: 171 DYENKCLVPNEDEIPIAKEVFTTYLKLGSLSETAKSLNERGYRVKTWTTQAGRTRGGDKF 230 Query: 241 LANKALIGICVPSYRARGKGISEI-AGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPML 299 N + P Y + + S I G P +IS++LF AVQ I A + Sbjct: 231 QKNNVSRMLNDPVYIGKVRYKSGIYDGQQPAIISEELFEAVQTILQANNISKTGYRQNEN 290 Query: 300 INLLRTVMKCEAC--GNTMIVHAVSGSLHGYYVCPMRRLHR---CDRPSIKRDLVDYNII 354 L+ +++C +C + G + YY C + H C S+ ++ ++ Sbjct: 291 TFYLKGLVRCGSCRSSMSPSFSYSKGKKYYYYRCMVNNDHSKDQCRIGSVHARKLEDLVV 350 Query: 355 NELLFNCSKIQPVEN--KKDANETLEL-------------KIIELQMKINNLIVALSVA- 398 NEL F + ++ + + E E ++ ++ K NL+ L Sbjct: 351 NELKFLAGDPRIIDGVVENASKEQREKVKALAAKKKVLTDRLTQVDKKAKNLLEVLGEGG 410 Query: 399 ----------PEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNS--FSDFYAIDLTSKN- 445 E+ + + + + KE+ L++K +++ + + I Sbjct: 411 TQNNRSGYITKELDGLEIQAKQMRKEIEAIEFESNDLENKILSADMIRENFKIFKDVYEH 470 Query: 446 -GRELCRTLAYKTFEKIIINTDN 467 + L + +K++ + Sbjct: 471 LTHDEKYDLLHLLVKKVVYFEEE 493 >UniRef50_Q97JP5 Site-specific DNA recombinase n=1 Tax=Clostridium acetobutylicum RepID=Q97JP5_CLOAB Length = 544 Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 99/519 (19%), Positives = 191/519 (36%), Gaps = 77/519 (14%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 +KK Y+R S SL Q+++I + K N Y+ +ED +S G Sbjct: 11 LKKVYGYVRLSRDEDKEQASLENQKQIIRTYAKNNG--YILVKIFEDDNVS---GMTFDR 65 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 +E + IE+G I LLV+ L R+ R K A+ ++ + + I VI++ +N Sbjct: 66 EGLNELKEVIENGNI---DILLVKDLSRIGRHKAYSAL-FMEELRSKKIKVISIAENLD- 120 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 N+D N+ K IL Q A + S +++ ++ +K+++ L P Sbjct: 121 NMDENNDILIGFKQILNEQYAKD----ISRKIRAAFHQKQKEGL------VIVPPFGYEK 170 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESA--------- 231 +++ D + ++ IF L + IA+ L + V S + Sbjct: 171 NNQTNKIEIDEECAGVVKKIFSLYIGGFGYKKIAQQLTEEKVHTPSWHQFQKSGKVYHAG 230 Query: 232 --------WGPSVIEKLLANKALIGICVPS-------YRARG---KGISEI-AGYYPRVI 272 W I ++L+N+A IG Y+ RG K I +YP +I Sbjct: 231 KKWIGQDIWSDRTIARILSNEAYIGTLKCHTTTRSVIYKTRGLIPKDEQIIHENFYPPII 290 Query: 273 SDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVS--GSLHGYYV 330 ++++ + I+ + I+ ++ C+ CG+ + G Y+ Sbjct: 291 DEEVWEKTKAIKKNRTRGHVRASGNSKIHKYAGLLICKDCGSGFVAKKRKWNGIERIEYI 350 Query: 331 CP-MRRLHR--CDRPSIKRDLVDYNI---INELLFNCSKIQPVENK------------KD 372 C R + C I+ + +D + + L C + +K Sbjct: 351 CNAYHRFGKTVCTPHRIREEELDNILCGFLERLKETCEENLNRADKFITKWNSKKRNYDK 410 Query: 373 ANETLELKIIELQMKINNLIVALSV--------APEVTAIAEKIRLLDKELRRASVSLKT 424 + + ++ +I L+ ++ L+ EKI +L+ ++ K Sbjct: 411 SIDKIQREIFSLKTEVKAYAKQLAKQLINEELFQELTQETKEKIDILENQIDTFQEVKKI 470 Query: 425 LKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIII 463 K+ ID + ++L +KII+ Sbjct: 471 SKNAKAGLLKSKEIIDKIIEE-KDLVSADLQMLVDKIIV 508 >UniRef50_C7HT51 TnpX site-specific recombinase n=2 Tax=Clostridiales Family XI. Incertae Sedis RepID=C7HT51_9FIRM Length = 572 Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats. Identities = 96/517 (18%), Positives = 186/517 (35%), Gaps = 72/517 (13%) Query: 4 AIAYMRFSSP--GQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 A+ Y+R S + +S++ QR +I + + N + Y D G + G + Sbjct: 12 AVMYLRLSKEDGEKTESNSISNQREIINSYARKNQIPIV--KEYVDDG---YSGANFDRP 66 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F E + A T++V+ L R R+ + ++ +GI I++ DN Sbjct: 67 NFKEMIKAAYD---RKFNTIIVKDLSRFGRDYIEAGKYIQRIFPENGIRFISVNDNYDSK 123 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL- 180 +N+ + ++ + + S++VK S K KR+ G ++A P Sbjct: 124 SADINDTHLILP--IKNFINDSYCRDISNKVKSSQKIKREK----GDFISAFAPYGYKKS 177 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFS-------------- 226 ++ + V D I+ IF +++ S AIA LN V N Sbjct: 178 EENKNKLVIDKKISDIIKNIFDMKLLGYSSKAIADELNHLGVLNPRKYKESQGFKCNGFQ 237 Query: 227 -GKESAWGPSVIEKLLANKALIGICVPSY------------RARGKGISEIAGYYPRVIS 273 K W + +++ N+ IG + + + + +IS Sbjct: 238 NTKGGTWSAKTVNRIIENEVYIGNTLQGKSVTLSYKNKKQIEKEKEEWIRVENTHEAIIS 297 Query: 274 DDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHG--YYVC 331 ++F + N+S+ I++ ++ C+ CG+++I V +Y+C Sbjct: 298 KEVFTIANTMLKRDL---NNSRGKDKIDIFTGMLFCKECGSSLIRRTVKYKKREEIFYIC 354 Query: 332 PM-RRLHRCDRPSIKRDLVDYNII----------NELLFNCSKIQPVENKKDANETLELK 380 + C R SIK + + + L +I +N KD + + Sbjct: 355 SKYNKGKSCTRHSIKEETLIKAVSKIMKSYIEFNENLYSKVQRIDINKNLKDNQIPILKR 414 Query: 381 IIELQMKI---------NNLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVN 431 + ++ ++I EK+ LD+ + + K K Sbjct: 415 EKAMTEELLSSLYLDLKEDVISKEEYQLFRKNYTEKLTKLDESIEYRLKKQEDTKEKIDK 474 Query: 432 SFSDFYAIDLTS-KNGRELCRTLAYKTFEKIIINTDN 467 + S + ID+ KN E+ R +KI I+ D Sbjct: 475 NKS--WIIDINKYKNLSEIDRLSVVMLIDKIFISEDK 509 >UniRef50_B0TD52 Resolvase, n-terminal:recombinase, putative n=5 Tax=Clostridiales RepID=B0TD52_HELMI Length = 549 Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats. Identities = 88/515 (17%), Positives = 179/515 (34%), Gaps = 66/515 (12%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 +A AY R S+ + S Q + + N ++ L I + D G++ K + Sbjct: 35 RAAAYCRVSTDQEEQLTSYEAQVAYYTDKIMSNPEWTLAGI-FADEGITGTSVK--KRTN 91 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F + G I +L +S+ R +R V + + ++ + GI VI +N I Sbjct: 92 FLRMIRLCRKGKI---DIILTKSISRFARNTV-DCLNYIRELKELGIAVIFENEN----I 143 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 +++ +I ++A A +SE S V+ ++ A +SG + + Sbjct: 144 NTMKADTEIIIT-MLAGFAQAQSESISQNVRWG----KRQAFKSGKVSFQYSRIYGYERG 198 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 + P++ + IF+ + S+ I + L + GK W ++ +L Sbjct: 199 ENDKPRVVPEQAAVVRRIFQSYLAGSSVPDIKRMLEAEGIAAAGGKPQ-WSVGALQYMLR 257 Query: 243 NKALIGICVPSY--------RARGKGISEIAGY-----YPRVISDDLFYAVQEIRLAPFG 289 N+ G + + K E+ Y + +I LF VQ G Sbjct: 258 NEKYCGDALLQKTFVENCISKKTRKNNGELPKYLVQNHHEAIIDRTLFEKVQAEIARRAG 317 Query: 290 ISNSSKNPMLI--------NLLRTVMKCEACGNTM--IVHAVSGSLHGYYVCPMRR---L 336 S L ++ C CG + + G + C R Sbjct: 318 KRKVSDKTSKTGQSKYSGRYALTELLICGNCGTPYKRVTWSKRGKKKIVWRCISRLDYGT 377 Query: 337 HRC-DRPSIKRDLVDYNI---INELLFNCSKIQPVENKKDANET------------LELK 380 C P++ + + + IN ++ N ++ + +E + Sbjct: 378 KYCKSSPTVDEERLQAAVLKAINAMMSNRERLIGILKTNLKITLSEKSSGATNPYAIENR 437 Query: 381 IIELQMKINNLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKS------KGVNSFS 434 I ELQ + L+ + A + +K R + +E++ +L+ ++ K Sbjct: 438 IRELQDSMMELVAVAAKAGNAESYEDKFREISEEIKSLQKTLEQYQAEQNGPDKLARQMD 497 Query: 435 DF-YAIDLTSKNGRELCRTLAYKTFEKIIINTDNK 468 D A++ E + + + I + ++K Sbjct: 498 DICKALEDAPFEITEYSNNIVRQFIDTIKVVNEDK 532 >UniRef50_UPI0001C355F0 cassette chromosome recombinase B n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C355F0 Length = 559 Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats. Identities = 87/525 (16%), Positives = 176/525 (33%), Gaps = 78/525 (14%) Query: 4 AIAYMRFSSPGQ--MSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 Y+R S + DS+ Q+ L+ +++K D L I + D G G Sbjct: 24 VGLYVRLSKEDNGYHTSDSIQMQQCLLEQYVKTQQDMKLVGI-FCDNGA---TGTDFDRP 79 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F ++A+ I ++V+ L R R V K+ G+ + + D Sbjct: 80 DFERMMEAVRRREI---DCIVVKDLSRFGRNYVETGYYLEKIFPFLGVRFVAVNDCYDTL 136 Query: 122 IDSLNEPYSL-IKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPR-WLS 179 + + + +K I+ + A + S+ K +R+ E G + + P +L Sbjct: 137 KCADGDEMVVSLKNIVNSLFAKDISK------KSGTALRRKQ--EKGEFIGSWTPYGYLK 188 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAV---------------KN 224 + + + DP+ + IF R+E + IAK LN+ + + Sbjct: 189 SPEDKNHLIIDPETAPIVRDIFTWRLEGLGYDEIAKRLNEQKILCPTMVRFLRGEFKKDS 248 Query: 225 FSGKESAWGPSVIEKLLANKALIGICVPSYRAR------------GKGISEIAGYYPRVI 272 + W ++ + N G + R + + + ++ Sbjct: 249 PRTVGTRWVAQTVKNITNNMVYAGHMAQGKQIRSLCEGIPRKEMERQDWIIVRNTHTPIV 308 Query: 273 SDDLFYAVQEIRLAPFGISNSSKN-PMLINLLRTVMKCEACGNTMIVHAV---SGSLHGY 328 +D + VQ I + + P NLL ++ C+ CG TM + G + Sbjct: 309 DEDTWNRVQRINSEAKTKNTEKRQLPKTENLLVGMVYCKDCGRTMGRYKNCSRKGHIRYT 368 Query: 329 YVCPMRRLHR----CDRPSIKRDLVDYNIINELLFNCSKIQPVENK----------KDAN 374 Y C +R+ + C SI + I+ + + EN + Sbjct: 369 YCCRIRKASKGMSGCTLKSIGEQELFDIILKSIRIQIAATIEQENLLRRLKAQPEYQKTK 428 Query: 375 ETLELKIIELQMKI-NNLIVALSVAPEVTA----------IAEKIRLLDKELRRASVSLK 423 LE + E+Q I N+ ++ + ++ + EL L Sbjct: 429 RKLESSLAEIQTAISKNMARRAALFESYNDNVVSDEEYLYMKQRYDVQAAELLSRQEQLL 488 Query: 424 TLK---SKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINT 465 + +K ++ +++ ++L R + + I I Sbjct: 489 AEQVVYAKTLSPENEWIKACRKYDGVKQLSRAMVLELIHHITIEG 533 >UniRef50_C7GH36 Site-specific recombinase, resolvase family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GH36_9FIRM Length = 560 Score = 211 bits (536), Expect = 7e-53, Method: Composition-based stats. Identities = 81/435 (18%), Positives = 154/435 (35%), Gaps = 60/435 (13%) Query: 3 KAIAYMRFSSPGQMSGD--SLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 KA Y R S + + + ++ Q L+ ++K + D ++ Y+ ++F G + + Sbjct: 27 KAGLYARLSHEKEENIERGTIETQMELMKNYVKDHEDIVIEEEYYD----ASFTGTNFER 82 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 F L+ + G I ++V+ L RL R V ++ + I + D Sbjct: 83 PDFKRMLEDAKTGRI---NCIIVKDLSRLGRNYVEMGNYIERVFPFLNVRFIAVTD---- 135 Query: 121 NIDSLNEPYSLIK---AILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPR- 176 + DS L+ I+ A + S+ S+ + W + M P Sbjct: 136 DFDSFRPGTDLMMPLKNIVNEFYAKDISKKVSTAHRRKWT--------TDEYMCGFAPYG 187 Query: 177 WLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFS---------- 226 +L ++ V D + LI+KL ++ + IAKYLN+ + + Sbjct: 188 YLKSKTEKNRIVVDEATAGNVRLIYKLFLDGKGYTPIAKYLNEQGIMSPLMYLKSLGYQQ 247 Query: 227 --GKESAWGPSVIEKLLANKALIGICVPSY--RARGKGIS----------EIAGYYPRVI 272 W + ++ +L N+A IG V + I + + ++ Sbjct: 248 NVKTNGVWTKTTVKSILTNQAYIGSAVHGKVVIEKYNNIPLHATDPSEWVIVENTHEPLV 307 Query: 273 SDDLFYAVQ----EIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGY 328 + F Q EI A F + P NLL+ + C CG M + + + Y Sbjct: 308 DKETFEKAQERVKEISDAYFAKEFTKHPPNEKNLLKGKIVCGDCGKGMRLSPRTTKSYVY 367 Query: 329 YVCPMRRLH---RCDRPSIKRDLVDYNIINEL---LFNCSKIQPVENKKDANETLELKII 382 + C C R I ++ V+ + ++ + C V + +A + K Sbjct: 368 F-CGTFSDGINPACSRHKINQEDVNNAVFAQISNHMRCCIDALRVIRELNARSSGLKKYD 426 Query: 383 ELQMKINNLIVALSV 397 + I L Sbjct: 427 VYEKAITRQRRELEK 441 >UniRef50_A1VBU1 Resolvase, N-terminal domain n=1 Tax=Desulfovibrio vulgaris DP4 RepID=A1VBU1_DESVV Length = 511 Score = 211 bits (536), Expect = 7e-53, Method: Composition-based stats. Identities = 87/524 (16%), Positives = 177/524 (33%), Gaps = 76/524 (14%) Query: 3 KAIAYMRFSSPGQMSGD--SLNRQRRLIAEWL--KVNSDYYLDTITYEDLGLSAFKGKHA 58 + Y R S+ + + +L+ QR ++ + + + + Y+D G F G + Sbjct: 6 RCAIYTRKSTDEGLEQEFNTLDAQRESAEAFITSQRSEGWVVLPEHYDDGG---FTGGNL 62 Query: 59 QSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNT 118 + A LD + G I ++V +DRLSR + + + + H + +++ Sbjct: 63 ERPALKRLLDDVAEGRI---DCVVVYKVDRLSRS-LLDFSRLMDVFDKHKVSFVSVTQQF 118 Query: 119 VYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWL 178 + ++ A E EI R K R+ +G Sbjct: 119 NTTHS-----MGRLTLNILLSFAQFEREIIVERTKDKVYAARRKGKWTG----GMPVLGY 169 Query: 179 SLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGK--------ES 230 + + + + + + + IF++ ++++SL A K L D K Sbjct: 170 DVAPEGGRLLVNEEEAEQVRGIFQIYLDKQSLIATIKELEDRGWATKRWKTRSGHERGGK 229 Query: 231 AWGPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGI 290 A+ + + +LL N G V + G + ++ + + A Q F Sbjct: 230 AFKLNSLHRLLTNPIFTGQVVFQ-------GAVYEGEHKPIVDLNTWQATQRTLHGNFRR 282 Query: 291 SNSSKNPMLINLLRTVMKCEACGNTMIVHAVSG--SLHGYYVC---PMRRLHRCDRPSIK 345 N LLR ++ C ACG MI + YYVC R H+C S+ Sbjct: 283 GPLGSNRYGA-LLRGLLYCSACGTAMIHTCSKRDTKTYRYYVCLTAQQRGWHQCPSKSLN 341 Query: 346 RDLVDYNIINELL---FNCSKIQPVENKKDANET-----LELKIIELQMKINNLIVALSV 397 ++ ++ + N + I V NK LE + + + +I L + Sbjct: 342 AHDIETAVVEHIKGIGLNPAIISAVTNKATEKAQRNIMALEAEHLACEREIKKLTNEIRK 401 Query: 398 APEVT--------------------AIAEKIRLLDKELRRASVSLKTLKS--KGVNSFSD 435 E +++ L+ +E+R L + K + F Sbjct: 402 LTEQPIKDARDPALAKLAEAQQALMEKEQRMTLVKEEVRSIQHGLTSHDEVGKTLQQFEP 461 Query: 436 FYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIV 479 + T + + E++ + + + + F + + Sbjct: 462 LWGTLTT-----QEKIKIIRLLVERVGFDGRDNSVTVTFRSQDI 500 >UniRef50_C6LJ39 TnpX site-specific recombinase n=3 Tax=Clostridiales RepID=C6LJ39_9FIRM Length = 742 Score = 211 bits (536), Expect = 7e-53, Method: Composition-based stats. Identities = 87/538 (16%), Positives = 173/538 (32%), Gaps = 91/538 (16%) Query: 4 AIAYMRFSSPG--QMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 Y R S S+ Q+ ++ +++K + TY D G + G + Q Sbjct: 13 VGIYCRLSKDDGTDNESASIATQKSILTDYVKKQGWHL--AKTYVDDG---YSGTNFQRP 67 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 +F + IE+G I ++ + L RL R + + H + I + D V Sbjct: 68 SFQNMIKDIENGQI---NCVITKDLSRLGRNYLDCGLYLEVFFPEHNVRYIAINDG-VDT 123 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 ++ + + IL S S ++K +++ + Q G M P D Sbjct: 124 LNKSAMDITPFRNILN----EMYSADVSVKIKSAYRARFQQ----GKFMGTYAPYGYVKD 175 Query: 182 D-KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGK------------ 228 + D + IF L + L I K++N V + Sbjct: 176 PADHNHLLIDDKVAHVVREIFDLALAGNGLGKIRKHINSQHVLRPAAYAAEQGATGYERY 235 Query: 229 -------ESAWGPSVIEKLLANKALIGICVPSYRARGKGISE------------IAGYYP 269 W + + +L + G R S+ I + Sbjct: 236 FEDNEENRYIWSENSLRNILRSPIYAGNLAGYKRIAANMKSKKRPSKLPEEWEVIPNTHE 295 Query: 270 RVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLH--- 326 +++ + F VQ++ + N N+ V+KC CG + + + Sbjct: 296 GIVTQEEFDTVQQLMTSRRREKNKG---DFENIFAGVIKCADCGYALRAMSANRRKRPDI 352 Query: 327 ---GYYVCPMRRLHR---CDRPSIKRDLVDYNIINELLFNCS------------KIQPVE 368 Y C + C +I+ + +++++ + + E Sbjct: 353 IDCVQYTCNNYGRYGNVMCTAHAIEARDLFNAVLDDINRFADMAVNDERAVRAIEKRLTE 412 Query: 369 NKKDANETLELKIIELQMKINNLIVALSVAPEVTAIAEKIRL---------LDKELRRAS 419 + +T+E + +L ++ L S E + E+I KE Sbjct: 413 TDQSKAKTMEKERKKLNKRLAELDRLFSSLYE-DKVMERITERNFEMMSGKYQKEQLEIE 471 Query: 420 VSLKTLKSKGVNSFS------DFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCD 471 LK + S+ DF ++ + +EL T+ +KI+++ K+ D Sbjct: 472 ARLKEVTETLNESYEKSQGIRDFLSLIRNYQGLKELDATVVNALIDKILVSEREKSAD 529 >UniRef50_D1C6R3 Resolvase domain protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6R3_SPHTD Length = 558 Score = 211 bits (536), Expect = 7e-53, Method: Composition-based stats. Identities = 86/534 (16%), Positives = 155/534 (29%), Gaps = 80/534 (14%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 ++A Y R S+ Q S+ Q EW + Y T Y D S A+ Sbjct: 14 RRAAIYARVSTDRQ----SVEGQIEFAREWAPKHG--YTLTEIYADNARSGTI-PFAERE 66 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKV---GEAIERLKLILNHGIDVITLCDNT 118 A L + G +LV DRL R++ E + + I G +I + Sbjct: 67 AGRRLLIDLRAGRF---DVVLVYKYDRLGRDREVGDIETRQAILDIERAGGQIIAMTQPI 123 Query: 119 VYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWL 178 + + E R + G + P Sbjct: 124 D-----ASTIMGRFTRSVQIDIGTIERLNTLERSADTL---ATLVRRPGFFTGGTAPYGY 175 Query: 179 SLD--DKRTAFVPDPDR--------VKTIELIFKL-RMERRSLNAIAKYLNDHAVKNF-- 225 ++ D+ V D + + +I+ E RS IA LN + Sbjct: 176 RVEGQDRDARLVVDEEPIPGLDISPADVVRMIYHWLVAEGRSTVWIAAELNRRGIPTRAL 235 Query: 226 -----SGKESAWGPSVIEKLLANKALIGICVPSYRARGKGISEIAGY---YPRVISDDLF 277 W P + ++ N G+ V R G+ + P ++ + + Sbjct: 236 LAGRARPTAGIWRPGRVSTMVRNTVYKGVAVYGRRKSGRSPFPVPVTEREVPAIVDAETW 295 Query: 278 YAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIV---HAVSGSLHGYYVCPMR 334 A QE + +N LL ++KC ACG+ G YY C Sbjct: 296 EAAQEQLRRNKK--RAKRNAKRQYLLSGLVKCGACGSNYTGLAYTTKDGQERRYYTCNNI 353 Query: 335 R------LHRCDRPSIKRDLVDYN-------------IINELLFNCS-KIQPVENKKDAN 374 RC P++ + I+ EL + N + Sbjct: 354 HQRHNTGGERCTNPALSWQYEELIWRDIDAWLENPGPILEELAAQLNTDADDAGNIEADI 413 Query: 375 ETLELKIIELQMKINNLIVALSVA-PEVTAIAEKIRLLDKELRRASVSLKTLKSKG---- 429 E ++ + + L+ A + T + ++ + +E ++ LK Sbjct: 414 ERRRRQLAGQEKERERLLTAYRKGIIDDTDLERELAAMRRERAVLEEEIEALKRAQQRRE 473 Query: 430 ------VNSFSDFYAIDLTSKNGRELC--RTLAYKTFEKIIINTDNKTCDIYFM 475 V + + + + G R + ++I++ D Y Sbjct: 474 ERRAGLVTAAALLEELKARRREGLTFAVKRQVVEALVKEIVVQPDGTPDVTYRF 527 >UniRef50_C7RGX1 Resolvase domain protein n=12 Tax=Firmicutes RepID=C7RGX1_ANAPD Length = 606 Score = 210 bits (535), Expect = 8e-53, Method: Composition-based stats. Identities = 94/534 (17%), Positives = 191/534 (35%), Gaps = 74/534 (13%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 +K+ AY R S+ + +S Q +K N ++ L I Y D + + Sbjct: 25 LKRVAAYCRVSTDSKDQLESYKSQVDYYTNLIKNNKNWTLAGI-YADEATTGTTA--TKR 81 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 F + ++G I ++ +S+ R +R + + ++ ++L+ + + V+ +N Sbjct: 82 ADFMRLISDCQNGDI---DMIITKSISRFARNTL-DTLKYVRLLKENNVGVVFEEEN--- 134 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 ID+L L+ IL + A +E E S+ VK K K +E G ++ Sbjct: 135 -IDTLTMDGELLLTIL-SSVAQQEVENTSAHVKKGLKMK----MEKGELIGFQGCLGYDY 188 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 D + + + K + IFK +E + I + L + GK + W + + + Sbjct: 189 DPITKSISINEEEAKIVRYIFKRYLEGNGGSVIGRELEEQGYLTPRGK-TKWSDTTVLGV 247 Query: 241 LANKALIGICVPSYRARGKGISE-------------IAGYYPRVISDDLFYAVQEIRLAP 287 + N+ IG + I++ I ++ +IS + F QEIRL Sbjct: 248 IKNEKYIGDILMGKTFTVDPITKRRLANFGESDKYHIENHHEAIISKEDFEKAQEIRLRR 307 Query: 288 FGISNSSKNPM-------LINLLRTVMKCEACG---NTMIVHAVSGSLHGYYVCPMRRLH 337 N+ N ++++C CG + H S + C Sbjct: 308 AQNRNTIANKDRKREKLSRQYAFSSMLECGFCGEILSRRTWHTSSIYKKINWQCVKSTKK 367 Query: 338 R---CD-RPSIKRDLVDYNIINELLFNC-------SKIQPVENKKDANETLELKIIELQM 386 C I+ ++ + C + ++ +ETL + +L+ Sbjct: 368 GKKYCPHSKGIQEAAIEKAFVESYRQLCHADSTIIDDFLKIVEEEINDETLVKDLKKLEN 427 Query: 387 KINNLIVALSVAPEV---TAIAEKI------------RLLDKELRRASVSLKTLKSKGVN 431 ++N +I ++ +I E++ L E + +++K S Sbjct: 428 QLNRIISQERKLVDLHLEDSIDEEVYAKKYKKLTKQKEELLDEKKTLELTIKDEDS-IKE 486 Query: 432 SFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNK-------TCDIYFMNGI 478 F + + E RT+ +K+++ +K YF G+ Sbjct: 487 RLKQFKKVLENREIIEEFNRTVFESIVDKVVVGRIDKDGTVHPYDLTFYFKTGV 540 >UniRef50_UPI0001C3729E phage integrase family site specific recombinase n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C3729E Length = 516 Score = 210 bits (535), Expect = 8e-53, Method: Composition-based stats. Identities = 89/517 (17%), Positives = 178/517 (34%), Gaps = 58/517 (11%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 ++ AY R S+ + +SL Q+ ++ ++S++ + Y D G + K Sbjct: 18 RRVAAYCRVSTDNKDQLESLETQKAHYESYILLHSEWEYAGL-YYDTGRTGTKADI--RD 74 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 L A G + +LV+S+ R SR + + ++ +LN G+ + +N Sbjct: 75 GLQNLLTACRIGKVE---HILVKSISRFSRNT-TDCLSIVRELLNIGVTIYFEKEN---- 126 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 ID+ LI +IL + A EES S K S +++ + +GT P D Sbjct: 127 IDTGEMESELILSIL-SSMAEEESASISKNEKWSIQRR----MAAGTYKIGYVPYGYQRD 181 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 + +P + IF+ + S + IA L + G W S + ++ Sbjct: 182 ENGDML-IEPAEAGVVRFIFRTLLAGNSTDTIASALQQQGIPTRKG--GKWSGSTVRDII 238 Query: 242 ANKALIGICVPSYR------ARGKGISEIAGY-----YPRVISDDLFYAVQEI---RLAP 287 N+ +G + R E+ Y + +IS + F + R Sbjct: 239 INEKYVGDALFQKTYTDDSFRRHNNHGEVKTYLVSEHHEPIISHEDFDKANSLIRQRGKE 298 Query: 288 FGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRL--HRCDRPSIK 345 GI + + C CG S +VC RC ++ Sbjct: 299 KGIVRENGKYQNRFPFSGKITCGICGGKYKRRIHSHGAEIAWVCNTHITDIKRCSAKYVR 358 Query: 346 RDLVDY---NIINELLFNCSKIQPVENKKDANETLELKIIEL------------------ 384 D++ ++N+L+F+ + +++ + I + Sbjct: 359 DDVLKAAFITMLNKLIFSRKMLLRPLYDSLKSDSADESIQRMNELKLLLEKNLEKRYRLR 418 Query: 385 QMKINNLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSK 444 Q++ +I + + E+ + + EL + ++ V T+ Sbjct: 419 QLRGQEIIDNVVFSREMNTLKKLSEEYRNELS-ILSCYTSAEALEVTEMEKLLRYTETTA 477 Query: 445 NGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFK 481 E L + ++II+ + + G+ K Sbjct: 478 VVEEFSDALFHTFVDRIIVYGRD-YIEFKLKCGLTLK 513 >UniRef50_UPI0001BC7310 putative site-specific recombinase n=1 Tax=Vibrio parahaemolyticus AN-5034 RepID=UPI0001BC7310 Length = 261 Score = 210 bits (535), Expect = 9e-53, Method: Composition-based stats. Identities = 74/262 (28%), Positives = 121/262 (46%), Gaps = 13/262 (4%) Query: 25 RRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFSEFLDAIEHGYILPGTTLLVE 84 K N + L T+ DLGLSAF ++ + G F L I+ G I G+ L++E Sbjct: 1 MEATEAVCKENG-WQLSPTTFRDLGLSAFSAENLKKGDFGIILQLIKEGSISSGSVLILE 59 Query: 85 SLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDSLNEPYSLIKAILIAQRANEE 144 ++DR+SR+ E++ + I+ G+ + T+ D ++ DS + +L+ L A+RA+EE Sbjct: 60 NVDRMSRQNPQESVYTMLDIIRAGVRIYTIHDRRLHEKDSQDSFMNLMLWALAAERAHEE 119 Query: 145 SEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL---DDKRTAFVPDPDRVKTIELIF 201 S KS RV+ + K RQ A E G + P W+ + D +R + + LIF Sbjct: 120 SLTKSRRVREAKAKARQKAREEGKAIIGRVPSWIRKVTPKGGEPYYELDEERAEVVRLIF 179 Query: 202 KLRMERRSLNAIAKYLNDHAVKNFSGKE------SAWGPSVIEKLLANKALIGICVPSYR 255 +L+++ L AI L + + W S + K L + + G P R Sbjct: 180 QLKLDGYGLGAITNELIKRGIPPMGNRNVRKDLAPKWQVSTVRKWLRSPTVYGQYQPHIR 239 Query: 256 ARGKGISE---IAGYYPRVISD 274 GK + E I +YP + Sbjct: 240 VDGKKVPEGDPIDNFYPAAVDR 261 >UniRef50_D2RBA8 TnpX site-specific recombinase family protein n=1 Tax=Gardnerella vaginalis 409-05 RepID=D2RBA8_GARVA Length = 550 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 91/539 (16%), Positives = 184/539 (34%), Gaps = 82/539 (15%) Query: 2 KKAIAYMRFSSPGQMSGDS--LNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 K Y R S ++ GDS + Q+ ++ ++ + N + + + + D G + G + Q Sbjct: 17 KITALYCRLSKDDELQGDSNSIINQKSMLKKYAEDNH--FNNLMFFVDDG---YSGTNFQ 71 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 + + I+ G I T++V+ + RL R+ + + + N I I + + Sbjct: 72 RPDWLKLTALIDEGKIG---TIIVKDMSRLGRDYLQVGMYTEMVFPNADIRFIAINNGVD 128 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 N S N+ + I A + S ++K +K K +SG + + P Sbjct: 129 SNNQSDND-MTPFINIFNEFYAKD----TSRKIKAVFKAK----GQSGKPLCINPPYGYL 179 Query: 180 LD-DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGK---------- 228 D + + ++ D + + IF+L + + IA L + S Sbjct: 180 KDPEDKNHWIVDEEAASVVREIFRLCVNGYGPSQIANELIKRNIPTPSEHFFSLGIKIPS 239 Query: 229 -----ESAWGPSVIEKLLANKALIGICVPSYRARGKGISE------------IAGYYPRV 271 + W I +L + +G V + + + + Sbjct: 240 AKSEIKGVWNQKTISNMLEKQEYLGHTVNFKTRKKSYKCKKTLLNPKEDWLIFKNTHEAI 299 Query: 272 ISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLH--GYY 329 I + F VQ IR +N + P +L ++ C CGN + G H Y+ Sbjct: 300 IDQETFDIVQRIRNGRRVRTNLGEMP----VLSGMLFCADCGNKLYQVRGKGWSHDKEYF 355 Query: 330 VCPMRR--LHRCDRPSIKRDLVDYNIINELLFNCSKIQPVENK------KDANETLELKI 381 VC R +C I+ ++ +++EL S + E + K + + L K+ Sbjct: 356 VCATYRKQKGKCSSHQIRNIQIEAILLHELRMITSFAKQHEEEFVGLVMKKSEKELTQKL 415 Query: 382 IELQMKINNLIVALSVAPEV------TAIAEKI---------RLLDKELRRASVSLKTLK 426 ++ +S + + KI DKE +++L+ Sbjct: 416 KSSNRELEQAKARISKLDTIVQHLYEDNLDGKISDERFKSMSESYDKEQAELKSKIESLE 475 Query: 427 SKGVNSFSDFYAIDLTSKNGRELCR------TLAYKTFEKIIINTDNKTCDIYFMNGIV 479 + + + +D K R+ + +KI + K + Sbjct: 476 AFISKAQEECLNVDSFLKLVRQYTDIQELNAEIIRTFVDKIYVEKSEKVAGTRTKKQTI 534 >UniRef50_B7IRZ6 Resolvase domain protein n=17 Tax=Bacillales RepID=B7IRZ6_BACC2 Length = 546 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 99/538 (18%), Positives = 196/538 (36%), Gaps = 71/538 (13%) Query: 2 KKAIAYMRFSSPGQMS-GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ- 59 K Y R S+ Q G S++ Q R++ E+ K YL Y D G+S GK+ Sbjct: 8 KTVAIYARVSTIEQAEEGYSIDEQLRVLNEFCKSEG--YLVYDEYVDRGIS---GKNISG 62 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 A L+ E +LV ++RL+R+ + + + ++ + + I + + Sbjct: 63 RPAVQRMLNDAEQKKFE---VVLVWKMNRLARKSL-DLMNIVEKLNSKNIAFRSYTEKYE 118 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 P ++ L+A A E + VK+ + ++ +G + +S Sbjct: 119 TET-----PPGKLQFQLMAAIAEYERNNIAENVKMGMIARAKEGRWNGGQVLGYDVVEIS 173 Query: 180 LDDKRTA---FVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSV 236 D+++ V + T++LIF++ +IA +N + GK + + Sbjct: 174 SDNRKRKDTHLVINEREANTVQLIFQMYGSGHGYKSIANCINKKGYRTKKGK--TFSLNA 231 Query: 237 IEKLLANKALIGICVPSYRA--RGKGISEI-------AGYYPRVISDDLFYAVQEIRLAP 287 I+ ++ N G + R K + I G + +IS++++ Q + + Sbjct: 232 IKIIVTNPVYAGYIRYNVRKDWNEKRRNNINPNPIIQKGEHEPIISEEVWQVAQNVYQSR 291 Query: 288 FGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLH-------GYYVCPMRRLHR-- 338 N + L +M+C ACG M++ + +L YYVC + Sbjct: 292 SCKPNRIHDGEF--PLTGIMRCPACGAGMVISPTTNTLKDGTKRVLEYYVCGSWKNKGTL 349 Query: 339 -CDRPSIKRDLVDYNII---------NELLFNCSKIQPVENKKDANETLE------LKII 382 C ++ + D + ++L+ K N K + ++ Sbjct: 350 VCRSNGVRTEYADAFTLDKLQRLMHSDKLIKELVKSVNSRNGKKFAPLQKEFEMYAKQMN 409 Query: 383 ELQMKINNLIVA-LSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDL 441 E + K++ A EK + L+ +++ ++ L+ + + + ++ Sbjct: 410 EAEQKLSKTFDAYTDELISKAMYVEKAKRLEGQIQELKELMEPLRKQIQGNTVKVVSYEM 469 Query: 442 -------TSKN-----GRELCRTLAYKTFEKIIINTDNKTCDIYF-MNGIVFKHYPLM 486 SK RE + L + KI IN D K I N V K + Sbjct: 470 IKEVLLNFSKAFQNALTREQRKRLLHLLIHKITINEDRKIESIQLKFNNEVLKELKIE 527 >UniRef50_C3AWE0 U153 integrase n=1 Tax=Bacillus mycoides Rock1-4 RepID=C3AWE0_BACMY Length = 450 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 94/488 (19%), Positives = 179/488 (36%), Gaps = 52/488 (10%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 M KA Y+R S+ Q+ S+ QR I + K + + Y D G + G + Sbjct: 1 MIKAAIYIRVSTQEQVENYSIEVQRERIRAFCKAKN--WDVYDEYIDGG---YSGSNLDR 55 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 L + ++V LDRLSR + + L + +D +++ + Sbjct: 56 PDIKRLLKDL-----NKIDVVVVFKLDRLSRSQRDTLELIEEHFLKNNVDFVSITE---- 106 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 +D+ + IL + A E E + R+++ K+ + L P + Sbjct: 107 TLDTSTPFGKAMIGIL-SVFAQLERETIAERMRMGHIKRAEKGLRGNG--GDYDPAGYAR 163 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 ++ V D K I+ F+L + S+ + + L + S W + Sbjct: 164 NEGH--LVTKDDEAKHIKRAFELYEQYNSITRLQEILKEEGY-------SVWRFRRYRDI 214 Query: 241 LANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLI 300 L+N G + + G + +IS + F VQ I G + + Sbjct: 215 LSNPLYAGYVTFAGKTY-------KGQHEPIISLEQFKRVQAILSRHKG---HNAHKAKQ 264 Query: 301 NLLRTVMKCEACGNTMIVHAVSG-----SLHGYYVCPMRRL-----HRCDRPSIKRDLVD 350 +LL +M C CG + ++ + YY+C +R RC + R ++ Sbjct: 265 SLLSGLMTCSCCGEPFVAYSTGKSKDVSRRYYYYICRAKRFPSEYEQRCMNKTWSRKKLE 324 Query: 351 YNIINELL-FNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTAIAEKIR 409 +I ++ +K KK+ E I ++ K+ L+ + ++ + + Sbjct: 325 DIVIGQMKDLTVAKYH--NQKKEKKINYEKLIKDIDKKMERLLDLFTTNTNISRQLLEKK 382 Query: 410 LLDKELRRASVSLKTLKSKGVNSFS-DFYAIDLTSKNGRELC--RTLAYKTFEKIIINTD 466 + + L + + LK KS+ S S D L S + E + + E+I I+ + Sbjct: 383 MEEHNLEKEKLILKQQKSEQEISISNDMLTKTLKSFDSLEFKDRQIVINHFIEEIYIDHE 442 Query: 467 NKTCDIYF 474 N F Sbjct: 443 NVEVIWRF 450 >UniRef50_A0L9E5 Recombinase n=19 Tax=Bacteria RepID=A0L9E5_MAGSM Length = 447 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 72/415 (17%), Positives = 154/415 (37%), Gaps = 47/415 (11%) Query: 3 KAIAYMRFSSPGQMSGD--SLNRQRRLIAEWL--KVNSDYYLDTITYEDLGLSAFKGKHA 58 + Y R S+ + D SL+ QR A ++ + + L Y+D A+ G + Sbjct: 8 RCAIYTRKSTDEGLEQDFNSLDAQRESCANFIASQKQEGWVLVPDHYDDP---AYSGGNL 64 Query: 59 QSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNT 118 A L IE G + +++ +DRLSR + + + +++ H + ++ Sbjct: 65 DRPALQRLLQDIEAGKV---DSIVCYKIDRLSRS-LMDFAKLVEIFDRHQVTFTSVTQ-- 118 Query: 119 VYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWL 178 + ++ N L +L+ A E E+ + R++ + R+ G M P Sbjct: 119 --SFNTANSMGRLTLNMLL-SFAQYEREVTAERIRDKYAASRKR----GIWMGGHPPLGY 171 Query: 179 SLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNF--------SGKES 230 ++D++ V + + + + IFK ++ S + K L + + + + Sbjct: 172 DVEDRK--LVINAEEAQQVRQIFKRFIQMGSATLLIKELGEKGITSKIRQLADGRTKGGK 229 Query: 231 AWGPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGI 290 + + K+L N+ +G G + +I+ D + VQ I Sbjct: 230 SIDKGTLYKILNNRVYLGEVAF-------RGEVYPGEHAPIIAQDQWDKVQSILKKNRRS 282 Query: 291 SNSSKNPMLINLLRTVMKCEACGNTM--IVHAVSGSLHGYYVC---PMRRLHRCDRPSIK 345 +++ L+ +++C C M +G + YY+C C S+ Sbjct: 283 RSNNTRNQSPAPLKGIIRCGHCNRAMRPTHTRKNGIQYRYYLCMTASKNSHADCPLASVS 342 Query: 346 RDLVDYNIINELLFNCSKIQPV-----ENKKDANETLELKIIELQMKINNLIVAL 395 VD + + + + V + ++ E + +I KI+ + L Sbjct: 343 APQVDEAVFKRVRQIITTPEMVSHVWRQTSEELPEVRQQEISTALKKIDPIWDEL 397 >UniRef50_A5D4E3 Site-specific recombinases n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D4E3_PELTS Length = 533 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 92/515 (17%), Positives = 167/515 (32%), Gaps = 59/515 (11%) Query: 1 MKKAIAYMRFSSPGQMS-GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 M A+ Y+R S+ Q G S+ QR + + + I + D G+S G + Sbjct: 1 MSAALIYLRVSTEEQAERGYSIAAQREECRARAQESGATEI--IEFVDEGVS---GSILE 55 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 A L+ ++ G I L RLSR V + + I G ++I + Sbjct: 56 RPALVAALEKLKAGGIRWFICL---DTSRLSRS-VAHQLLLIDEIKKAGTELIFVNSRFT 111 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 + P +++ E R + + K + +G + + Sbjct: 112 ------DTPEDRFHLTVLSAVDEYERARTRLRSLIGKRAKAK----AGKLTHSPGLYGYE 161 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERR--SLNAIAKYLNDHAVKNFSGKESAWGPSVI 237 D + + K I L+++ S IA LN + + GK W + Sbjct: 162 FDKETDTLRIIEEEAKIIRLMYQWFASGEDASPYKIANRLNAMGIPSPRGKR--WSKQTV 219 Query: 238 EKLLANKALIGICVPS-------YRARGKGISE------------IAGYYPRVISDDLFY 278 +++LAN A G S + K E + P ++ + Sbjct: 220 KRILANSAYAGTLYISRYDTKDVKFNKYKPPEERVSRKERPREEWVPISVPAIVDKQTWE 279 Query: 279 AVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVH--AVSGSLHGYYVCPMRR- 335 A Q+ S LL +M+C CG TM + G YYVC + Sbjct: 280 AAQKRFENSRRRWRSF--STYPYLLSGLMRCGKCGATMHGNLVTSKGKKRAYYVCTAKSP 337 Query: 336 ----LHRCDRPSIKRDLVDYNI---INELLFNCSKIQPVENKKDANETLELKIIELQMKI 388 C + ++ I ++ L N K++ +ET + EL Sbjct: 338 GLPGRQHCQSSYLNAAEIEEVIWQKVSAWLTNPEKLRTELQAAFPDETAQALETELDAVE 397 Query: 389 NNLIVALSVAPEVTAIAEK----IRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSK 444 L+ A V + +K +++ L L + + DL ++ Sbjct: 398 KELVRAYEERSRVATMFQKGFIPEAEMEERLGEIKGRRDYLSRRREQILGELSRCDLAAR 457 Query: 445 NGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIV 479 + L A ++++ K C I + + Sbjct: 458 ELKRLEELAAGMGNALDSLSSEEKKCLINLLIAEI 492 >UniRef50_C8VVS5 Resolvase domain protein n=19 Tax=Firmicutes RepID=C8VVS5_DESAS Length = 552 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 109/532 (20%), Positives = 201/532 (37%), Gaps = 71/532 (13%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 + AY R S+ + S Q E +K N ++ L I Y D G SA K + Sbjct: 32 RVAAYCRVSTTLEQQETSYEAQVSYYTEKIKSNPNWKLAGI-YADDGKSATNTK--KRED 88 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F+ ++ G I ++ +S+ R +R V ++++ ++ + I V + + Sbjct: 89 FNAMIEDCMAGKI---DMVITKSVSRFARNTV-DSLQNIRKLKEKNIAVFFEKEG----V 140 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 ++L L+ IL +Q A EES S + ++ E+G + D Sbjct: 141 NTLEGTGELLITILSSQ-AQEESRNLSENTRWGLVRR----FENGVVSVNHNKFLGYTKD 195 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 K V P+ + + IF+L +E S IAK L V +GK S W +VI+K+L Sbjct: 196 KNGELVIVPEEAELVRRIFRLYLEGSSSIQIAKILESEGVLTVTGK-SKWCSTVIDKMLL 254 Query: 243 NKALIG----------ICVPSYRARGKGISE---IAGYYPRVISDDLFYAVQEIRLAP-- 287 N+ +G + R + KGI I + +I +L+Y VQE + Sbjct: 255 NEKYMGDVLQQKTYTIDFLTKKRVKNKGIVPQYYIEDDHEAIIPKELYYQVQEEKARRAS 314 Query: 288 -------FGISNSSKNPMLIN---LLRTVMKCEACGNTMIVH--AVSGSLHGYYVCPMRR 335 K + L +M C CG + G + + C R Sbjct: 315 LCKQAMSRKAKRDEKEKSRYSSKFALSDIMVCRECGQPYRRQVWSKYGQKNAVWRCENRL 374 Query: 336 LHR---CDRPSIKRDLVDYNIINELL---------------FNCSKIQPVENKKDANETL 377 + C ++++ Y I + N ++ + K+ + Sbjct: 375 KNGTKNCKHSPTYKEVMLYEAIMAAINSVVENRGEFVGAFRENVIRVIGSYSTKNLSTEY 434 Query: 378 ELKIIELQMKINNLIVALSVAPEVTA--------IAEKIRLLDKELRRASVSLKTLKSKG 429 +++I +LQ ++ LI + VT I+E+I + ++ LK ++ Sbjct: 435 DMQIEKLQTEMLALIEENAKQGVVTEDFDERYKGISERINDMKQKKLDQVRELKMAENYQ 494 Query: 430 VNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFK 481 + T+ + R+ L + + + D++ +I F +GIV K Sbjct: 495 QRLNDMDACLKKTTCDVRDFDHDLVRRLLQSVKAIRDDE-IEIQFKSGIVMK 545 >UniRef50_A8SCA0 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SCA0_9FIRM Length = 545 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 97/548 (17%), Positives = 185/548 (33%), Gaps = 86/548 (15%) Query: 2 KKAIAYMRFSSPGQMSGDS--LNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 K Y R S + +S + Q+ ++ E+ N + + Y D G + G ++ Sbjct: 10 KVTALYCRLSKDDGSNSESLSIRTQKAMLMEYATRNG--FGNCQYYVDDG---YSGTNSD 64 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 AF E LD I G + T++ + RL R + HG+ I + D Sbjct: 65 RPAFQELLDDIREGKVA---TVITKDQSRLGRNHIETGTYMEIFFPEHGVRYIAINDGYD 121 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 N S + + I+ A + S ++K + + +++ SG +++ P Sbjct: 122 SNEQS-QMDIAPFRNIINEMYAKD----TSRKIKSALRTRKK----SGKYISSGAPFGYQ 172 Query: 180 LDD-KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNF------------- 225 D V DP+ +E I+ + E L+ IAK L+D V Sbjct: 173 KDPADHNHLVIDPNTAPVVEYIYSMAEEGLGLHRIAKRLHDEKVLKPCYYKKEMFGRFID 232 Query: 226 SGKESAWGPSVIEKLLANKALIGICVP---------SYRARGKGISE---IAGYYPRVIS 273 K W + I ++L + G + S + R E + + +I Sbjct: 233 DEKMYDWDSAYISQVLHSPVYAGHIIYEAKPTVSMKSKKRRYIPFEERAIVPNTHEAIIP 292 Query: 274 DDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHG------ 327 D + VQ I + K N+ + +++C CG TM+V Sbjct: 293 QDRWENVQRILYSRSSSFMCDKT-DYDNIFKGIVRCADCGRTMLVKVEHRRKRNSVLDQT 351 Query: 328 YYVCPMRRL---HRCDRPSIKRDLVDYNIINELLFNCSKI-------------------- 364 +Y C R CD +++ ++ + ++ + Sbjct: 352 FYCCSTYRKYGAKACDSHNLEARVLHEAVFADIQAHAKAAVSNREALVKKIANQMHLRVS 411 Query: 365 QPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTA----IAEKIRLLDKELRRASV 420 K + + +I E++ L +S +A++ EL Sbjct: 412 SDRAQHKRDLKQCKARIAEIEDLYAKLYEDVSKGLLPEKRFQMLADRYDKEQAELTEKIE 471 Query: 421 SLKTL---KSKGVNSFSDFYAIDLTSKNG--RELCRTLAYKTFEKIIINTDNKTCDIYFM 475 + + ++ DF ID SK EL + ++ +KI+++ K Y Sbjct: 472 QYEREGRAEHDQLDKIQDF--IDEVSKYAGITELNYKILHQLIDKILVSRAEKVDGEYVQ 529 Query: 476 NGIVFKHY 483 +F + Sbjct: 530 KIQIFYRF 537 >UniRef50_UPI0001BCECF1 putative integrase n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCECF1 Length = 532 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 99/540 (18%), Positives = 192/540 (35%), Gaps = 72/540 (13%) Query: 4 AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAF 63 A Y R S+ Q ++ Q ++ +N + Y+D G++ + A Sbjct: 10 AAVYCRVSTDDQAERGTIESQIEYANKYCDLNGIRIV--KIYKDDGITGTL-PIEERPAG 66 Query: 64 SEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNID 123 +E L + G +TLLV LDRL R I + + +G+ + ++ + Sbjct: 67 TELLSDAKEGLF---STLLVFKLDRLGR-VTRIIINAIYELEQYGVKLKSMTEPFD---- 118 Query: 124 SLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDK 183 ++P ++A A+ E R++L + A +G + P ++ Sbjct: 119 -TSDPSGRFLLTILAGVADLERSNILQRMQLGTNR----AAAAGKWLGGIVPYGYIVNGD 173 Query: 184 RTAFVPDPD--------RVKTIELIFKLRM-ERRSLNAIAKYLNDHAVKN------FSGK 228 R + I LIF L E+ S A+A LN + GK Sbjct: 174 RF-LEVNETEIPGTGMSEADVIRLIFHLIAEEKMSSIAVAHRLNSLGIPPSYVLRGIKGK 232 Query: 229 -----ESAWGPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEI 283 W + + N G+ R+ G I P ++S +++ QE+ Sbjct: 233 RHNHTRGIWFTGRVLCIAKNTTYYGVHRYGKRS-PHGRELIEREVPAIVSKEIWDEAQEV 291 Query: 284 RLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRR------LH 337 + +N LLR ++KC ACG+T + G+ YY C +R Sbjct: 292 M--HNNQLTAMRNAKTKYLLRGLIKCAACGSTYVGVNDKGT--RYYTCNGKRMYKKLGRE 347 Query: 338 RCDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANE-----------TLELKIIELQM 386 +C ++ D V+ + + + + V AN LE+++ E + Sbjct: 348 KCTALAVNMDWVESEVWEDCMQYINNPNMVVEAIAANRGKATESAKQIHLLEMQLAECEN 407 Query: 387 KINNLIVAL-SVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKN 445 + ++ + + +++R + + L LKS+G S + + Sbjct: 408 ERERVMDVYRAKLITFEEVEKQLRKVADKKSTVQFELSALKSRGEASA---------TFD 458 Query: 446 GRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKHYPLMKVISAQQAISALKYMVDGE 505 +E + + +K+ D+ T + I + IS + ++ + V GE Sbjct: 459 QQETTLEILNEIKKKLT---DSSTVSLDLKFEIFHTLIKKITAISTEDGLTLKVHYVFGE 515 >UniRef50_C4ZEQ6 Cassette chromosome recombinase B n=35 Tax=Bacteria RepID=C4ZEQ6_EUBR3 Length = 556 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 88/558 (15%), Positives = 174/558 (31%), Gaps = 92/558 (16%) Query: 3 KAIAYMRFSSPGQMSGDS--LNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 +A Y R S + G+S + QR ++ ++ + + Y+D G F G + + Sbjct: 21 RAAVYCRLSKDDDLQGESASIANQRDMLEKYCEKQG--WEVVAVYQDDG---FTGLNMER 75 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 L AIE I ++ + L RL R + +G+ I + D Sbjct: 76 PDLQRMLRAIERRQI---NLVITKDLSRLGRNYLQTGHLIEDFFPRNGVRYIAMNDGIDT 132 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 D N + K IL S+ S +V S+ K Q G P Sbjct: 133 LRD--NNDIAPFKNILN----EMYSKDISKKVHSSYLLKAQK----GQFTGCLAPFGYRK 182 Query: 181 D-DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSG------------ 227 D + + + D + + LIF + N I + L + + + Sbjct: 183 DPEDKNHLLIDEETAPIVRLIFGYALNGHGPNYIRRRLEEEKIPCPTWWNRERGLRNTRT 242 Query: 228 ---------KESAWGPSVIEKLLANKALIGICVPSYR-----------ARGKGISEIAGY 267 W SVI+ LL N G + + + + G Sbjct: 243 KWEKKDPEKGRYMWDFSVIKDLLMNPVYTGAIASQKKDYRFKIGTIGEKKPEDWIVVEGQ 302 Query: 268 YPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGS-LH 326 + +I F VQ + +++ I+L ++KC CG ++ + + Sbjct: 303 HEPLIDRMSFDIVQNKLKSRQRPGQTNE----ISLFAGLIKCGECGKSLTIRYTNAKHPQ 358 Query: 327 GYYVCPMRR---LHRCDRPSIKRDLVDYNIINELLFNCSKIQPV-------------ENK 370 Y C + C + I D + +++ ++ + Sbjct: 359 QIYSCKTYNAFGKNHCTQHRIDYDTLCSHVLRKIRECARAALMDGEAVADRLTNTCEAEQ 418 Query: 371 KDANETLELKIIELQMKINNLIVALSVAPEVTAIAEKIRL--LDKELRRASVSLKTLKSK 428 ++ E +E + + +I L + E IA +I + L + LK+K Sbjct: 419 REQREAMERSLTRDEERIEVLDKMVMRLYE-DMIAGRISEQNFNTMLEKTQTEQTELKAK 477 Query: 429 GVNSFSDFYAIDLTSKNGRELCRTL-------------AYKTFEKIIINTDNKTCDIYFM 475 + + ++ + + ++I++ + D Sbjct: 478 VSEGRKRLSDEVQLANDAKQWVEAIQEYANITELDAATLNRLIKEIVV-HERIDEDKTRH 536 Query: 476 NGIVFKHYPLMKVISAQQ 493 I H+ L + +Q Sbjct: 537 ISIEI-HFNLKPIPEVEQ 553 >UniRef50_C8SMT4 Recombinase n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SMT4_9RHIZ Length = 541 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 93/518 (17%), Positives = 177/518 (34%), Gaps = 82/518 (15%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 M + Y R+SS Q S+ Q RL E + + TY D +S + Sbjct: 1 MTRVALYARYSSDNQREA-SIEDQLRLCREHSFK--ERWTVVRTYVDAAISGAS--IVRR 55 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 L + G +L E+LDRLSR++ A K + G+ ++TL + V Sbjct: 56 PDIQRLLSDAQSGLFE---IVLAEALDRLSRDQEDVA-GLFKRLRFAGVTLVTLSEGAV- 110 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTI-MTASCPRWLS 179 +E + +K + A + + +++ + + +G + + L Sbjct: 111 -----DELHVGLKGTMNALFLRD----LAVKIRRGQSGRILNGYAAGGLSYGYRVVKKLD 161 Query: 180 LDDK--RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVI 237 + R D + + + IF+ RS AIA LN + + G AWG S I Sbjct: 162 ESGEPIRGLREIDEHQAQVVRRIFQEFSVGRSARAIAADLNKEGIPSPFG--GAWGASTI 219 Query: 238 EK-------LLANKALIGICVPS-----------YRARGKGISEIAGYYP----RVISDD 275 L N+ IG+ V + R E R++ D Sbjct: 220 NGNLKRRSGFLYNEIYIGLLVFNRIKMVKDPETGKRISRPNPPEKWQVMEVSHLRIVDDA 279 Query: 276 LFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRR 335 L+ A Q R +G + ++ +++C CG + V C R Sbjct: 280 LWEAAQ-ARKKLYGGAKLHHRRRPKHMFSGLVRCGCCGASYTVKNQDQ-----LACAAHR 333 Query: 336 -LHRC-DRPSIKRDLVDYNII----NELL-----------FNCSKIQPVENKKDANETLE 378 C + +I+ ++ ++ LL ++ + + + N+ E Sbjct: 334 EKGTCTNNRTIRVGDLEKRVLAGVQRRLLAPDAIAGFLAEYHAEQKRLNAMNRQRNKEAE 393 Query: 379 LKIIELQMKINNLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVN------- 431 +++ + +I N+I A++ ++ K+ L+ E L+ + + Sbjct: 394 KRLLGIDTQIANIIDAIADGVSTASMKSKLLDLESEKESLGRELQAMAAAESIVEFHPAA 453 Query: 432 ------SFSDFYAIDLTSKNGRELCRTLAYKTFEKIII 463 S+ + K+ R + KI I Sbjct: 454 VEAYRRKVSELQRALQSDKSERHEAARIVRSLVAKIEI 491 >UniRef50_Q1QGT0 Recombinase n=2 Tax=Bradyrhizobiaceae RepID=Q1QGT0_NITHX Length = 537 Score = 209 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 94/516 (18%), Positives = 182/516 (35%), Gaps = 82/516 (15%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 KA Y RFSS Q S+ Q L + + Y+D +S + Sbjct: 2 KAAIYARFSSDKQTDR-SIEDQVALCRAICEREG--LIVVAVYDDRAISGASTLN--RLG 56 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 + + + G L+ E+LDR+SR++ A K + GI++ T D Sbjct: 57 WQRLMRDAKAGKF---DVLVAEALDRISRDQEDLA-GIHKRLRFAGIEIRTAQDGI---- 108 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDA--LESGTIMTASCPRWLSL 180 + + +K +L + + L+ K +R A + G + + Sbjct: 109 --AGDIHIGVKGLLGSLYLKD----------LAQKTRRGQAGVIRDGRHNGGRSYGYRPI 156 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVI--- 237 KR D T+ IF ++ RS IA LN V G W S I Sbjct: 157 PGKRGELEIDEAEAATVRQIFADYLDARSPRDIAAALNKKGVPGPRG--GVWNASTIAGS 214 Query: 238 ----EKLLANKALIGICVPSYRARGKGISE---------------IAGYYPRVISDDLFY 278 +L N+ +G V + + K + R+I D + Sbjct: 215 RKRLNGILQNELYVGRIVWNRQTFIKDPETGKRISRENPREQWMSADAEHLRIIDADTWV 274 Query: 279 AVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPM-RRLH 337 V++ R G + +LL ++KC CG+ IV + VC + Sbjct: 275 RVRK-RREDRGGPKGAYATRPKHLLSGLVKCGCCGSGYIV-GGNDKRGSLLVCTRMKETG 332 Query: 338 RC-DRPSIKRDLVDYNIINELLFNCSKIQPVEN--------KKDANETLELKIIELQMKI 388 C +R ++ R+ ++ ++ + N + + + ++ + + + +L+ ++ Sbjct: 333 LCENRRTVPREKIEALVLKGIEENLAAPELIAEYVREYHRMSRELHSSTAHRHRDLEKRL 392 Query: 389 NNLIVALSVAPEVT-------AIAEKIRLLDKELRRASVSLKTL-------KSKGVNSFS 434 N+ A+S A +V A+ +++ L+ E + L N++ Sbjct: 393 GNVNGAISKAVDVLLAEAPSRALRDRLAALEAERDEIEAEIAALAPPAVEFHPNAANAYR 452 Query: 435 D-----FYAIDLTSKNGRELCRTLAYKTFEKIIINT 465 D A+ + ++ R + EK++I+ Sbjct: 453 DKVRHLKRALAESDEDSRAAAHEAIREIVEKVVIHP 488 >UniRef50_C0ESV4 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ESV4_9FIRM Length = 566 Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 84/488 (17%), Positives = 163/488 (33%), Gaps = 67/488 (13%) Query: 4 AIAYMRFS--SPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 A Y R S S +++ Q L+ ++K D + Y D+ G + + Sbjct: 33 AALYARLSYESEKNRERNTIETQMVLLHNFVKEQKD-IVVAKEYYDISK---TGTNFERD 88 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F+E + I+ G I ++V+ L RL R V ++ + I++ D+ Sbjct: 89 GFNEMMQDIKEGNI---DCVIVKDLSRLGRNYVEAGSYIERVFPFFNVRFISVNDH---- 141 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 DS + SL+ ++ +N +E S + + + + +G + D Sbjct: 142 YDSFRDDISLLISM-----SNVYNEFYSRDLAKKIRSSYRTSWANGEFPSGQMAYGYEKD 196 Query: 182 DKR-TAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAV-------------KNFSG 227 +PDP ++ IF+ ++ + IA+ LN N Sbjct: 197 KDNPHQLIPDPVAAPVVKKIFQYFIDGMTYAEIARKLNADGYLCPKAYKLDKAGKANEKS 256 Query: 228 KESAWGPSVIEKLLANKALIGICVPS------------YRARGKGISEIAGYYPRVISDD 275 W + K+L N+ G V + + + I + ++S Sbjct: 257 ATWTWSGGTVHKILENQYYAGDSVHNQFTNDSWAAQRQKMNQKEEWIIIKNTHEALVSRK 316 Query: 276 LFYAVQE-----IRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYV 330 F VQE ++ ++ N N + + C CG TM ++ + H + Sbjct: 317 DFDEVQEKIGHIVKRVNEARKSNGNNVRDFNFFKQKIVCADCGKTMYLYGKTKGNHRRFY 376 Query: 331 CPMRRLH-RCDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLELKIIELQMKIN 389 C +LH +C SI V+ ++ + + + + I Sbjct: 377 CGNNKLHGKCTPHSITDLEVNDYVLRVIRAHINVYVENVDL-----------------IR 419 Query: 390 NLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGREL 449 L + +I+ KEL + +V + L V D + SK E Sbjct: 420 RLNQRQESIKKYDVFNREIKKCRKELEKVAVHRERLFEDYVCRIIDAEQYETFSKQDAET 479 Query: 450 CRTLAYKT 457 + + Sbjct: 480 EKEIQNNM 487 >UniRef50_A5Z6W7 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5Z6W7_9FIRM Length = 549 Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 100/541 (18%), Positives = 187/541 (34%), Gaps = 76/541 (14%) Query: 4 AIAYMRFS-SPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 Y+R S + G S+ Q+ ++ ++L D+ + TY D G G + Sbjct: 22 VALYIRLSVEDNKKRGCSVENQKLVLNDFLSDKPDF-VVYDTYIDNGA---TGTNFHRPG 77 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F + L IE G+I ++V+ L RL R + + H + I + D Sbjct: 78 FQQMLSDIEAGHI---NCVIVKDLSRLGRNSIDTGYYIEQYFHAHNVRFIAVTDQFD-TE 133 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 DS N ++ + +E + + K + + A++ G + A P D Sbjct: 134 DSGNLHGGIMLPLKNMI-----NEAYALDIGRKIKAQARQAMKDGDYIGARAPYGYRKDP 188 Query: 183 KR-TAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKE------------ 229 + D + ++ IF+ E SLN I + LN+ + S + Sbjct: 189 DNCHKLLIDENTAPVVKQIFEWAHEHVSLNRIVRNLNEMGIPAPSHYKKDTGEITSPGLI 248 Query: 230 --SAWGPSVIEKLLANKALIGICVPSYRARGKGISEIAG---------YYPRVISDDLFY 278 W + K+L ++ G V AG + +IS +LF Sbjct: 249 GSGKWQTRTVMKILESEVYTGDLVQGKTKIVDHQQVKAGEDNLIIAKCTHEPIISYELFN 308 Query: 279 AVQEIRLAPFGISNSS-KNPMLINLLRTVMKCEACGNTMIVH---AVSGSLHGYYVC-PM 333 AVQE R S ++ K P N+ + + C CG ++ G ++ C Sbjct: 309 AVQEYRKQICEESKATPKRPYTPNIFKGKVFCADCGRSLHRQRAERRKGPDTYWFHCLTN 368 Query: 334 RRLHR--CDRPSIKRDLVDYNIINEL-------------LFNCSKIQPVENKKDANE-TL 377 R+ + C +++ + + L LF Q E K + + Sbjct: 369 SRIEKDSCKGATMQEKELISTVTAILEKELTVALGMSLPLFQLEARQKQEKDKLKIQMSA 428 Query: 378 ELKIIELQMKI-----NNLIVALSVAPEVTAIAEK----IRLLDKELRRASVSLKTLKSK 428 + + IE ++ N + + E + I L E+ S+ +L Sbjct: 429 KRQEIEKTRRLIRGLYENFVQGILTNDEYFELKADYEYAINALSGEIEVFEKSMDSLD-- 486 Query: 429 GVNSFSDFYAIDLTSK---NGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKHYPL 485 N + + A++ +K L L + E+I I+ + + F F+ + Sbjct: 487 --NQLARYRAMEKDAKTLAQDHVLTAELIERLIERIEIDH-ERNIHVTFRFKNEFQGKAV 543 Query: 486 M 486 Sbjct: 544 E 544 >UniRef50_UPI0001C361A0 site-specific recombinase n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C361A0 Length = 564 Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 90/533 (16%), Positives = 180/533 (33%), Gaps = 76/533 (14%) Query: 3 KAIAYMRFSSPG--QMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 + +Y+R S Q+ DS+ QR ++ + + + + L +D + G + + Sbjct: 10 RTYSYLRLSVEDGDQIESDSIKNQRVIVNRYKENHPEIQLVGEEIDD----GYSGTNFKR 65 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 F L+ I+ G I ++V+ L RL R+ + GI + + DN Sbjct: 66 PGFQNLLELIKKGMI---DCIIVKDLSRLGRDFTEVLRYVQRRFPEWGIRFVAIDDNYDS 122 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 + +S + + + + + + S R L + E G + A Sbjct: 123 DDESCKQDFLTLPIKSLLNESYPANTSISIRNTL------KAMREQGLFVGAYAYYGYQK 176 Query: 181 D-DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLN------------DHAVKNFSG 227 D + R + DP + IF ++ S +AIA+ L+ + + Sbjct: 177 DPEDRHRLILDPIASGVVRDIFAWKICGLSQDAIARRLDSLGFLPPADYKVSQGIPYKTT 236 Query: 228 KE----SAWGPSVIEKLLANKALIGICV------PSYRARG------KGISEIAGYYPRV 271 + S W + ++L N A +GI V P+++ + + G P + Sbjct: 237 FKLYERSHWTAVAVGRILCNIAYVGILVQGKTTTPNFKVHKTIYKTEEEWDIVEGAIPPI 296 Query: 272 ISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVH--AVSGSLHGYY 329 +S F V + + + L +++C C +++ +G +GYY Sbjct: 297 VSWIDFMIVNHLLEKDTRTAPGQDT---VYLFSGILECADCHQSLVRKPAKYNGKEYGYY 353 Query: 330 VCPMRRLHR--CDRPS--------------IKRDLVDYNIINELLFNCSKIQPVENK-KD 372 VC R H+ C P I+ + + +L I + K + Sbjct: 354 VCSTNRDHKEQCSSPHRVSEAKLKKSMLLLIRHQISMMVNLKSILQYVETIPFSDRKVEK 413 Query: 373 ANETLELKIIELQMKINNLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNS 432 + +E+ E Q + E E+ + K+ L+ L Sbjct: 414 ESNRMEMLKKEYQWNLKLSTSLYESFQEGILTKEEYLQMKKKYSERCGELEQLMENQEEE 473 Query: 433 FSDFYA--------IDLTSKNG--RELCRTLAYKTFEKIIINTDNKTCDIYFM 475 + + I+ K G +EL R L + I + ++ Sbjct: 474 SRNIFRNICGQNNWIEHFLKFGQIKELDRKLVVSFIKDIQVTAQGNLEVTFWF 526 >UniRef50_UPI0001C37E7C hypothetical protein RflaF_15886 n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37E7C Length = 513 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 93/515 (18%), Positives = 191/515 (37%), Gaps = 60/515 (11%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLI-AEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 + AY R SS + S Q + +++ ++ +D Y D G+S A+ Sbjct: 20 RCAAYCRVSSSSEDQLHSYAAQVKFYSEKFIGSETEELVD--IYADEGISGTGT--AKRT 75 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F + + G I + +SL R +R + + ++L+ GI + +N Sbjct: 76 EFQRLIRDCKRGKI---DRIYAKSLSRFARNT-KDCLNTVRLLRELGISIYFEKEN---- 127 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 ID+ LI ++ A EES + ++ +K+ +E G + P + Sbjct: 128 IDTAKTNDELIITVM-GSLAQEESTSIAQNMRWGIRKQ----MEKGAFKPRTAPFGYKSE 182 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 + + + D + ++ IF+ + IA LND K+ W +++ +L Sbjct: 183 NGK--LIIDEQESEIVKEIFRWYLSGIGTTQIANKLNDQ-YGRKGEKQIKWCHTIVRYIL 239 Query: 242 ANKALIGICVPSYRARGKGISEIAGY-------------YPRVISDDLFYAVQEIRLAPF 288 +N+ IG + R + + + +IS D F VQ++ Sbjct: 240 SNERYIGDLLLEKTYRTDTLPSVKKKNNGERDQFYVTESHDAIISRDEFEKVQQLMSKMA 299 Query: 289 GISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDL 348 K ++ ++++C CG+ +G+ + + C I D+ Sbjct: 300 VRYQPEKKNK--YIIGSILECGECGSGYRRKCNNGTYYWTCTSHDKNADNCPAKLIPEDI 357 Query: 349 VDYNII---NELLFNCSKIQP-----VENKKDANETLELKIIELQMKINNL------IVA 394 + I N+L+ + +I ++ + KII++ I ++ + Sbjct: 358 IKQAFISMCNKLIQHYREILLPLRRSLQELNMRRFSGNTKIIDIHKNIADIKEQRHVLSR 417 Query: 395 LSVAPEVTA--IAEKIRLLDKELRRASVSL-KTLKSKGVNSFSDFYAIDLTSKNGR---- 447 L + EK+ L+ +L R L KT K+ + + I + S + Sbjct: 418 LRKKGFMDEKKYNEKLTELESQLARQERELKKTAKADNEDDTLEQLDILIDSIEKQDNIT 477 Query: 448 -ELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFK 481 E L E+II+ +K+ + ++G+ K Sbjct: 478 TEFDEELFGIIVERIIVR--DKSLEFILISGLSLK 510 >UniRef50_C5V7P9 Recombinase (Fragment) n=3 Tax=Gallionella ferruginea ES-2 RepID=C5V7P9_9PROT Length = 514 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 85/467 (18%), Positives = 173/467 (37%), Gaps = 61/467 (13%) Query: 31 WLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLS 90 W N +L Y + G SA K F + + +++ SL R Sbjct: 1 WAAANG--HLVIQEYVEPGASATDDK---RPVFQQMISDAM-MKPAAFEVIVIHSLSRFF 54 Query: 91 REKVGEAIERLKLILNHGIDVITLCDNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSS 150 R+ + + KL N + V+++ S + +++ I+ ++ S+ S Sbjct: 55 RDGIEFGVYERKLAKNK-VKVVSITQ-----PTSDDAGGEMMRRIICMFDEHQ-SKEISK 107 Query: 151 RVKLSWKKKRQDALESGTIMTASCPRWL---------SLDDKRTAFVPDPDRVKTIELIF 201 V S K+ + +G + P S ++ DPD + + LI+ Sbjct: 108 HVSRSMKENARQGYFNG----SKAPFGYQAVATSTTGSRGRQKKKLAIDPDEAEVVRLIY 163 Query: 202 KLRMERR-----SLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLANKALIGIC---VPS 253 +L + + IAKYL ++ + W + L+N +G V Sbjct: 164 RLYLNGIEGRGAGVKEIAKYLATLGYQS---RGKPWSIQKVHWTLSNTLYMGDYYFNVMD 220 Query: 254 YRARGKGISE--IAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLIN--LLRTVMKC 309 +A+ E I P ++ D+F V+ +R + S ++ ++ + LL ++KC Sbjct: 221 SKAKKPRPPEEWIKTEIPAIVDADIFERVRVLRESRAPQSGTAIPKVMSSPVLLAGIIKC 280 Query: 310 EACGNTMIVHAVSGSLHGYYVCPMRRL---HRCDRPSIKRDLVDYNIINEL---LFNCSK 363 CGN M + G + YY C RR H C +I + D ++N++ +F+ + Sbjct: 281 GVCGNRMTLSTGKGGKYRYYKCTSRRGQGNHACSSKNIPMEKFDEMVLNQVANTIFHPDR 340 Query: 364 IQPV------------ENKKDANETLELKIIELQMKINNLIVALSVA-PEVTAIA-EKIR 409 +Q + ++++ LE ++ + K N L+ A+ E+ I + + Sbjct: 341 LQILMSELRERIQSGKNSRQEVVSELERQLKIMDEKQNRLLDAIENGIVELDEITHHRSQ 400 Query: 410 LLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYK 456 + + + + + ++ G+ L L K Sbjct: 401 QNKTIREALLIKMAEARRTPLPAAIEYLKPSQVDLLGKALRSKLLAK 447 >UniRef50_A5PDE8 Recombinase n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PDE8_9SPHN Length = 551 Score = 208 bits (529), Expect = 4e-52, Method: Composition-based stats. Identities = 75/481 (15%), Positives = 162/481 (33%), Gaps = 51/481 (10%) Query: 3 KAIAYMRFSSPGQMSG-DSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 +A AY+R S+ Q SL Q I ++ N+ ++ +E+ G+S G Sbjct: 9 RACAYVRVSTEDQADHRTSLTSQIHKIQQFCDDNAIELVEV--FEEPGVSGKGG---DRP 63 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F++ L P ++V SL R +R+ + + G+D ++ +N V Sbjct: 64 QFNKMLRRALDKS-HPYDLIVVNSLSRFARDLAVQTT-TFAQLQAAGVDFRSVTENFV-- 119 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL- 180 +L+++++ A + + + ++ + G + + Sbjct: 120 ---KGANGNLMRSMVGAFNQHNSDQCAMNTIRAMNANAMEGFFNGGPVPFGYQSIVVEKR 176 Query: 181 -DDKRTAFVPDPDRVKTIELIFKLRMER-----RSLNAIAKYLNDHAVKNFSGKESAWGP 234 D ++ D + + IF+L IA +LN+ F+ + + Sbjct: 177 GDKEKKKLDIIEDEAEVVRKIFRLARHGDGEGPLGARGIAMWLNERG---FTLRGGRFNN 233 Query: 235 SVIEKLLANKALIGICVPSYRARGKGISEIAGY----YPRVISDDLFYAVQEIRLAPFGI 290 S + +L G R K + P +IS+ + V +R Sbjct: 234 SNTDAILKRTHYRGYYFDGKRNEFKEPIPEENWIVVPCPAIISEAEYLEVAALRAKRAPT 293 Query: 291 SNSSKNPMLINLL-RTVMKCEA--CGNTMIVHAVSGSLHGYYVCPMR---RLHRCDRPSI 344 + +L ++ +C CG + V G + YY C R H C+ +I Sbjct: 294 VTPPRVTNGKTMLPASIARCGCPDCGEGLTVRTGRGGQYHYYSCRARVNMGAHTCNLKAI 353 Query: 345 KRDLVDYNIINELLFNCSK---------------IQPVENKKDANETLELKIIELQMKIN 389 +R+ +D +I +L+ + N++ ++ ++ I+ Sbjct: 354 RREDLDEIVIEQLIKRIFRRDRLLELLEHLLARSESLENNRRKDLAMTRSELTKVDKAIS 413 Query: 390 NLIVALSVA---PEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNG 446 NL+ + +++ K+L+ + S + + Sbjct: 414 NLLTMIESGAMQAADPIFVQRMAHNQSRKSALKAEEKSLELQLSTSKARIDGKMIEGFAK 473 Query: 447 R 447 R Sbjct: 474 R 474 >UniRef50_A5D5X5 Putative uncharacterized protein n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D5X5_PELTS Length = 491 Score = 208 bits (529), Expect = 4e-52, Method: Composition-based stats. Identities = 79/508 (15%), Positives = 166/508 (32%), Gaps = 71/508 (13%) Query: 4 AIAYMRFSSPGQMS-GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 Y+R S+ Q G S+ Q+ + + + + Y D G + GK A Sbjct: 5 VACYIRVSTDEQAEQGISIPAQKSRLLAFCRSQG--WNIYGFYIDDG---YSGKDLDRPA 59 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 + T+LV LDRLSR + + G+ ++ ++ Sbjct: 60 MRRLIGDTGAKKF---DTVLVLKLDRLSRRQKDVLFLLEDVFEPGGVGFKSVTESFDTTT 116 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 P+ ++A A E E RV+++ ++++ + G M P + Sbjct: 117 -----PFGKAALGMMAVFAQLERETIVERVRMA----KKESAKQGRFMGGPAPYGYRHNF 167 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERR-SLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 + D + T+ I+ + + IA+ L V + W + + K+L Sbjct: 168 ETKRLEVDEVQAGTVRWIYDRYLSGAPNYRHIAEELEHTGVPGPT--NEKWNKAFVRKIL 225 Query: 242 ANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLIN 301 N G+ G + ++S + + VQ++ + + ++ + Sbjct: 226 TNPVYAGLIRHRENLY-------PGRHDPIVSPEKWQEVQKLIKSRGAVRAAA--AVHTG 276 Query: 302 LLRTVMKCEACGNTMIV--------HAVSGSLHGYYVCPMR--------RLHRCDRPSIK 345 LL ++ C CG M V + + YYVC + R C Sbjct: 277 LLSGIIWCGECGARMRVKNVWQNHPNTNPKKVTRYYVCYSQDRAGGHMVRNPTCRCGYKH 336 Query: 346 RDLVDYNIINELL-----------FNCSKIQPVENKKDANETLELK--IIELQMKINNLI 392 V+ ++ EL + +N+ E + + + + K+ Sbjct: 337 GGAVEEQVLRELFCYSYDRRLLRRALEEALAAADNRAFLRELAQARKDLAATEKKLERWY 396 Query: 393 VALSVAP-EVTAIAEKIRLLDKELRRASVSLKTLKSKGVN------SFSDFYAIDLTSK- 444 A E + E+++ L + + ++S+ S + I Sbjct: 397 DAFEKGALEGDQLTERVKGLHQRKAYLRGQIAEMESRLKEGKERQTSVEEMMGILQDFPR 456 Query: 445 ----NGRELCRTLAYKTFEKIIINTDNK 468 E R + T + + + ++N+ Sbjct: 457 IWENATAEERREIVVNTVKAVKVYSNNR 484 >UniRef50_Q3K263 Prophage LambdaSa04, site-specific recombinase, resolvase family n=2 Tax=Streptococcus agalactiae RepID=Q3K263_STRA1 Length = 413 Score = 208 bits (529), Expect = 5e-52, Method: Composition-based stats. Identities = 73/367 (19%), Positives = 145/367 (39%), Gaps = 41/367 (11%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 ++ AY R S+ DSL Q+ + VN + Y D G+S K K Sbjct: 15 QRVCAYTRVSTTNSSQLDSLENQKAYFETFY-VNREDVDFLGVYYDKGISGSKEK---RP 70 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 +F L+A G I + +S+ R +R +E + + G+ + N Sbjct: 71 SFQAMLEACRQGQI---DLIHTKSISRFARNT-MTVLEVSRELKALGVGIYFEEQN---- 122 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 I++L+ + ++L A A EE + S + ++++K Q M + R++ D Sbjct: 123 INTLSNEGEGMLSVL-ASLAEEELQSMSDNQRWAFQRKFQRGE-----MVINTKRFMGYD 176 Query: 182 -DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 D + V + + + IF+L ++ ++ IAK LN V + ++ W + + + Sbjct: 177 VDDKGELVINEAEAQIVRRIFQLYLDGMGMHRIAKLLNQENVPTVT--DAKWHDTTVRNI 234 Query: 241 LANKAL-----------IGICVPSYRARGK-GISEIAGYYPRVISDDLFYAVQEIRLAPF 288 L N+ +GI P +G+ I + ++S +++ AVQ+ + Sbjct: 235 LKNEKYKGTVLLQKYFHVGINGPKRLNQGQVEQYLIEDNHEPIVSKEVWQAVQDKLASKT 294 Query: 289 GISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHR---CDRPSIK 345 +K+ +++KCE CG+T+ V+ + C C + Sbjct: 295 WKQGVNKHYR----FTSMLKCEYCGSTLKRQ-VTYKKQIVWCCSKYIKEGKASCRGMRVP 349 Query: 346 RDLVDYN 352 ++ Sbjct: 350 EKAIEEW 356 >UniRef50_C6LFU1 Site-specific recombinase n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LFU1_9FIRM Length = 496 Score = 208 bits (529), Expect = 5e-52, Method: Composition-based stats. Identities = 94/500 (18%), Positives = 170/500 (34%), Gaps = 62/500 (12%) Query: 4 AIAYMRFSSPGQMS-GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 A Y+R S+ Q G S+ Q + + K S Y D G + G Sbjct: 21 ADLYIRVSTTEQAEEGYSVEAQEAKLQAYCKAMS--YTINRVCIDPG---YSGTSMDRPG 75 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 E + + +LV LDRLSR + I + L + D I++ + + Sbjct: 76 LQELITDVRSNRCKK---ILVWKLDRLSRSQKDTLILLEDVFLANSCDFISVME----SF 128 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 D+ I IL A A E E R L R + + G + P D Sbjct: 129 DTSTPFGRCIVGIL-AAFAQMERENIRIRTTLG----RVEKIRKGYFSGSHAPLGYKFKD 183 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSV-IEKLL 241 + +P + +F+L + L+AI +Y+ D + + W + I ++L Sbjct: 184 GCNELLVNPYTSIMVREVFRLFLSGTGLSAIGRYMLDK----YGPGQYDWAKNTAIRRIL 239 Query: 242 ANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKN----- 296 +N +G + G + +IS+ +Y + I S Sbjct: 240 SNPVYMGKVRLN-------GELFDGIHEAIISETDWYMAAALLEHNKAIDKRSYRYALGT 292 Query: 297 -PMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMR--------RLHRCDR--PSIK 345 NLL ++ C CG M VS + Y +C + + C Sbjct: 293 PGRGDNLLTGLLFCGDCGARMYARKVSKTKKKY-ICHSVARTSAAMIKSNHCSNRLHPYT 351 Query: 346 RDLVDYNIINELLFNCSK----IQPVENKKDANET----LELKIIELQMKINNLIVALSV 397 + +D IINE+ VE +D ++ +I E+ + L+ Sbjct: 352 VEELDAVIINEIKKLSIDRSYFDSMVERCRDEKPLDFSAIQERIAEIDKQTGRLLNIYQT 411 Query: 398 A-PEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNG------RELC 450 + I+ ++ L +E + +L + S + D L + E Sbjct: 412 GLVCLEEISARLGTLKEEKEKLQQNLLSSDSATASCSLDATWKSLQGFSAIIASGDLEAM 471 Query: 451 RTLAYKTFEKIIINTDNKTC 470 + L + +K+++ ++ T Sbjct: 472 QRLIHSLIDKVVVLNNDITI 491 >UniRef50_UPI0001C37E79 resolvase, n-terminal:recombinase, putative n=2 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37E79 Length = 531 Score = 208 bits (529), Expect = 5e-52, Method: Composition-based stats. Identities = 100/523 (19%), Positives = 190/523 (36%), Gaps = 66/523 (12%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 + AY R S+ + +S Q + + N ++ L I + D G+S + K + Sbjct: 20 RVAAYCRVSTEQEEQQNSYQVQIDYYTDLINKNREWELAGI-FADEGISGTQTK--KRTE 76 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F++ + + I +L +S+ R +R V + +E ++ + + GI V+ +N I Sbjct: 77 FNKMIRLCKKRKI---DLVLCKSISRFARNTV-DTLEYVRQLKDLGIGVVFEKEN----I 128 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 ++L + A L A ESE S V + A G + + + Sbjct: 129 NTLTMTSEFMIA-LYGSFAQAESESISKNVSWGV----EKAFRDGKVRYSYNNLYGYRKG 183 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 P+ + + LI+K+ ++ +L IA++L D + + W + +L+ Sbjct: 184 ADGKPEIIPEEAEVVRLIYKMYLDGSTLRQIAQHLTDLKIPKRE--CTEWNLIAVRSILS 241 Query: 243 NKALIG----------ICVPSYRARGKG---ISEIAGYYPRVISDDLFYAVQE------- 282 N+ +G C+ +A+ G + + +I D + VQ+ Sbjct: 242 NEKYVGDALLQKTYTVDCITHKKAKNNGERAKYLVTDAHDAIIDRDTYNLVQQEMTRRSS 301 Query: 283 IRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVH--AVSGSLHGYYVCPMRRLHR-- 338 +R + L +M C CG+ + G + C R + Sbjct: 302 LRKKSDKCVTAQGKYSGKYALTEIMVCGECGSAYRRQTWNIHGRKCPVWRCVSRFDNGNR 361 Query: 339 -CD-RPSIKRDLVDYNI-------------INELLFNCSKIQPVENKKDANETLELKIIE 383 C PSI D + I I ELL + + + ++ ++ E Sbjct: 362 YCKQSPSIHEDKLHKAILSAINEYYDCKDNIKELLKSNVEQAMAGVSLKETKEIQKRLRE 421 Query: 384 LQMKINNLIVALSVA-PEVTAIAEKIRLLDKELRRASVSLKTLK-------SKGVNSFSD 435 + N+ I ++ + A+ E+ + L E + + LK L+ +K Sbjct: 422 IDDTRNDYITLIAAGTMDEEALDEQFKKLYTEEQDLNFRLKALEENNDIDNNKRTRINQA 481 Query: 436 FYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGI 478 ID +S E L K E I +N+ I F GI Sbjct: 482 LKNIDNSSCVLTEYNDMLVRKLIECIKVNS-KTEITIIFKGGI 523 >UniRef50_Q0TMZ4 Site-specific recombinase, resolvase family n=2 Tax=Clostridium perfringens RepID=Q0TMZ4_CLOP1 Length = 534 Score = 208 bits (528), Expect = 5e-52, Method: Composition-based stats. Identities = 108/558 (19%), Positives = 204/558 (36%), Gaps = 108/558 (19%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 MK A Y R S + GDS+ Q +L +LK + +T+ Y D G F GK+ + Sbjct: 1 MKTAAIYARRSKVVET-GDSIENQIQLCTNYLK--NIGINNTLIYSDEG---FSGKNTER 54 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 F ++ + TL+ +DRLSR +G+ + + + I I++ + Sbjct: 55 PGFVRLMNDAKQKKF---DTLVCYKVDRLSRN-IGDFSNLINELEKNEISFISVIE---- 106 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 D+ + I + + E E S RV + +G + P S Sbjct: 107 QFDTRAAMGKAMMYI-CSVFSQLERETISQRVCDNM----YSLATNGYWLGGEFPFGFSS 161 Query: 181 DDKR-----------TAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKE 229 K + +P + ++LIF +E SL+ + KYL + +K GK+ Sbjct: 162 SRKNFTDSSGKNRSYSELIPIEKEINLVKLIFNKYIELGSLSQVEKYLLQNNIKTRRGKD 221 Query: 230 SAWGPSVIEKLLANKALI-------------------------GICVPSYRARGKGISEI 264 W + I+ +++N + GI + R G Sbjct: 222 --WSKASIKNIISNPVYVKANDKTIEYFKSQGIKTYGEPDDIHGILIYKKRKGKSGKIRN 279 Query: 265 AG-------YYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTM- 316 + +I D + VQ+I + + + LL +++C CG++M Sbjct: 280 PDEWIYAVSTHEGIIDSDSWLEVQKIAEINKYKAPALGSSHKA-LLSGIIRCAQCGSSMR 338 Query: 317 ----IVHAVSGSLHGYYVCPMRRLH---RCDRPSIKRDLVDYNIINELL-FNCSKIQPVE 368 + + ++ YY+C ++ RC ++ VD +IN+L + K V+ Sbjct: 339 VSYGVPNKLTKKRKHYYMCTLKHNSGKVRCASKNVDGPEVDKLVINKLKELSLDKSYLVQ 398 Query: 369 NKKDANET------------LELKIIELQMKINNLIVALSVAPE----------VTAIAE 406 KD E+ ++ +I + + +I+NL+ +++ + +T + Sbjct: 399 RLKDYKESFATSSENILSKNIQNEISKNKEQIDNLVNNITLTEDPQLVQILLDKLTKLKS 458 Query: 407 KIRLLDKELRRASVSLKTLK------SKGVNSFSDFYAI--DLTSKNGRELCRTLAYKTF 458 K L L + + L + + A+ DL RTL Sbjct: 459 KSVELTNSLNKLNDELAKQDILINNCDNIIQKLKNLSALIDDLDVPQ----KRTLLSSVI 514 Query: 459 EKIIINTDNKTCDIYFMN 476 +K+ +N D I F + Sbjct: 515 DKVFVNGDTGAVKIKFKS 532 >UniRef50_D2KRD2 Putative integrase n=1 Tax=Lactobacillus phage phiPYB5 RepID=D2KRD2_9CAUD Length = 450 Score = 208 bits (528), Expect = 6e-52, Method: Composition-based stats. Identities = 81/453 (17%), Positives = 161/453 (35%), Gaps = 59/453 (13%) Query: 1 MKKAIAYMRFSSPGQMS-GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 MK A+ Y+R S+ Q G S+ Q + + +V + Y D G F G Sbjct: 6 MKIAV-YVRVSTLEQAESGYSIGEQTEKLTAYCRVKD--WQVAKIYTDPG---FSGSSLD 59 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 A + + + G +LV LDRLSR + + + I ++L +N Sbjct: 60 RPAMQQLIGDCKLGVF---DAVLVYKLDRLSRSQKDTLYLIEDVFNAYNIHFMSLSENFD 116 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 + P+ L++ A E E R+++ K ++ P + Sbjct: 117 TST-----PFGKAMIGLLSVFAQLEREQIKERMQMG---KLGRVKAGKISAWSNVPFGYT 168 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEK 239 ++ DP R + I+ + +S+ I K LN GK AW + + Sbjct: 169 KVKD--SYDVDPLRADIVRRIYADYLAGKSITKIMKELNREGHI---GKGVAWSYRTVRQ 223 Query: 240 LLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAP----FGISNSSK 295 +L N G + + G + +IS + VQ + SN+ + Sbjct: 224 VLGNVTYTGRIIFKGQVY-------DGLHTGIISKADWDEVQRVLKIRQLDQARKSNNPR 276 Query: 296 NPMLINLLRTVMKCEACGNTMIVHA--VSGSLHGYYVCPMRRLHR--------------- 338 +L ++KC CG T+ + YVCP R ++ Sbjct: 277 PFQARYMLSGLLKCHYCGATLAIAKSHTKNGPLWRYVCPTRHANKYHRNNAARYRIPPVN 336 Query: 339 CDRPSIKRDLVDYNIINELLFNCSKIQPVENKKD------ANETLELKIIELQMKINNLI 392 C+ +D ++ ++ E+ V +D + ++ ++ +++ + L+ Sbjct: 337 CELTYKYKDDLEEAVLREVKKVALDPDAVVASQDDGQPKIDKQAIKAQLAKIKRQQAKLV 396 Query: 393 VALSVAPEVTAIAEKI--RLLDKELRRASVSLK 423 ++ ++ + I + L +L + +L Sbjct: 397 DLYLLSDDLMLTSFTIGPKSLKSKLMLSRHNLS 429 >UniRef50_B0TCI6 DNA recombinase, putative n=20 Tax=Bacteria RepID=B0TCI6_HELMI Length = 525 Score = 208 bits (528), Expect = 6e-52, Method: Composition-based stats. Identities = 99/520 (19%), Positives = 186/520 (35%), Gaps = 62/520 (11%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 + AY R S+ SL Q++ + ++ N ++ + Y D G+S K ++ Sbjct: 22 RVAAYCRVSTDNDDQLLSLEAQKQHYEKIIRDNPEWEFAGL-YCDEGISGTKKEN--REG 78 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 L E I ++ +S+ R +R + +E ++ + GI + +N N Sbjct: 79 LLRLLRDCEKHKI---DFIITKSISRFARNTA-DCLEIVRRLSELGIFIYFEKEN--INT 132 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 S++ +++ A ES S K K++ ++GT +S P + Sbjct: 133 HSMDSEL---LLSVLSSLAENESVSISQNNKWGVKRR----FQNGTFKLSSPPYGYIYCN 185 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 VP P+ ++ IF + R +A+A+ LN + GK W S + +L Sbjct: 186 G--TIVPHPEEAAVVKRIFAEILTGRGTHAVAEGLNADGINPARGK--KWTASAVRGILE 241 Query: 243 NKALIGI-----------CVPSYRARGKGISEIAGYYPRVISDDLFYAVQEI---RLAPF 288 N+ +G + Y + + I ++ +IS + F A + I R Sbjct: 242 NEKYVGDSLFQKTYTDDNFIRHYNHGEEEMYYIKDHHEAIISREDFEAAKRILAQRSREK 301 Query: 289 GISNSSKNPMLINLLRTVMKCEACGNTMIVH---AVSGSLHGYYVCPMR---RLHRCDRP 342 GI + + + C CG+ A + + C + C Sbjct: 302 GIEKGTGKYLNRYAFSGRIICGECGSVFKRRIHMANKPGQYVAWCCSKHIASKTKDCSMV 361 Query: 343 SIKRDLVDYNII---NELLFN----CSKIQPVENKKDA------NETLELKIIELQMKIN 389 I+ D + + N+L N + ++DA ++ KI E + Sbjct: 362 YIRDDRIKEAFVLMMNKLYSNHNIILKPLVEAMKEQDASGSYAKIREIDAKIEENAERAQ 421 Query: 390 NLIVALSVAPEVTAIAEKI-RLLDKE---LRRASVSLKTLKSKGVNSFSDFYAIDL-TSK 444 L+ L+ + K L E LR +L + G+++ S+ A+ SK Sbjct: 422 ILVSFLTKGYLDPVLFNKQNNELKAETARLREQRAALAASSAGGLSALSEAEALLKYLSK 481 Query: 445 NG---RELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFK 481 G E L + E I + + G+V K Sbjct: 482 EGGIIEEFDEFLFERFVEGITVFS-PAEIGFRMKCGLVLK 520 >UniRef50_O05415 TnpX n=7 Tax=Firmicutes RepID=O05415_CLOPE Length = 707 Score = 207 bits (527), Expect = 7e-52, Method: Composition-based stats. Identities = 96/541 (17%), Positives = 192/541 (35%), Gaps = 91/541 (16%) Query: 5 IAYMRFSSPGQMSGDS--LNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 Y R S ++G+S + Q++ + ++ + N + + + D G F G + Sbjct: 9 ALYERLSRDDDLTGESNSITNQKKYLEDYARRNG--FENIRHFTDDG---FSGVNFNRPG 63 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F + +E G + TL+V+ + RL R + L + + + N++ + Sbjct: 64 FQSLIKEVEAGNVE---TLIVKDMSRLGRNYLQVGFYTEVLFPQKNVRFLAIN-NSIDSN 119 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS-LD 181 ++ + ++ I+ A + S+++K + + +D G + S P + L Sbjct: 120 NASDNDFAPFLNIMNEWYAKD----TSNKIKAIFDARMKD----GKRCSGSIPYGYNRLP 171 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFS--------------- 226 + V DP + ++ IF L + +S AIA+ L + V + Sbjct: 172 SDKQTLVVDPVASEVVKRIFTLANDGKSTRAIAEILTEEKVLTPAAYAKEYHPEQYNGNK 231 Query: 227 -GKESAWGPSVIEKLLANKALIG-------ICVPSYRARGKGISE-----IAGYYPRVIS 273 W S I +L + +G + + K E + +IS Sbjct: 232 FTNPYLWAMSTIRNILGRQEYLGHTVLRKSVSTNFKLHKRKSTDEEEQYVFPNTHEPIIS 291 Query: 274 DDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVH----AVSGSLHGYY 329 +L+ +VQ+ R ++ +S N L + C CG M + GS+ Y Sbjct: 292 QELWDSVQKRRS---RVNRASAWGTHSNRLSGYLYCADCGRRMTLQTHYSKKDGSVQYSY 348 Query: 330 VCP--MRRLHRCDRPSIKRDLVDYNIINEL------LFNCSKIQPVENKKDANETLELKI 381 C R++ C SI D V+ I++ + + N + +E + NE E K Sbjct: 349 RCGGYASRVNSCTSHSISTDNVEALILSSVKRFSRFVLNDEQAFALELQSLWNEKQEEKP 408 Query: 382 IELQMKINNLIVALSVAPEVTAI-----------AEKIRLLDKELRRASVSLKTLKSKGV 430 Q ++ + + + L K+ L+T Sbjct: 409 KHNQSELQRCQKRYDELSTLVRGLYENLMSGLLPERQYKQLMKQYDDEQAELETKMETMK 468 Query: 431 NSFSD----------FYAIDLTSKNGRELCRTLAYKTFEKIII-------NTDNKTCDIY 473 ++ F ++ KN E+ T+ + +KI++ + DIY Sbjct: 469 TELAEEKVSSVDIKHFISLIRKCKNPTEISDTMFNELVDKIVVYEAEGVGKARTQKVDIY 528 Query: 474 F 474 F Sbjct: 529 F 529 >UniRef50_A5Z7F2 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z7F2_9FIRM Length = 548 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 93/521 (17%), Positives = 198/521 (38%), Gaps = 65/521 (12%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 K+ AY+R S+ + +S Q++ E + + ++ L I Y D G++ K K + Sbjct: 29 KRVAAYVRVSTDDEEQLNSFTSQKQYYQEKISQSKEWILVGI-YADEGITGTKTK--KRD 85 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F ++ +G I +L +S+ R SR V + I+ ++++ + G+ VI +N Sbjct: 86 DFLRMINDCMNGKI---DIILTKSISRFSRNLV-DTIQYVRMLKSKGVTVIFEKENI--- 138 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 + + S ++ L++ A E E S+ VK+ K K + G +M + Sbjct: 139 --NTSTMESEMQLALLSTLAQNEVESLSANVKMGVKMK----MRRGELMGFNGCLGYDYH 192 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 + + + + +T+ LIF L + +IAK L N G W S + ++ Sbjct: 193 KEDKSITVNEEEAETVRLIFDLYLSGMGGISIAKELKRQCRLNKKG-VCKWTDSGVIGII 251 Query: 242 ANKALIGICVPSYRARGKGISE-------------IAGYYPRVISDDLFYAVQEIRLAPF 288 N+ G + IS+ I ++ ++S +++ QEIR + Sbjct: 252 KNEKYKGDLLLGKTYTVDPISKRRLENRGEEDKFYIENHHEPIVSREVWDRAQEIRKGRY 311 Query: 289 GISNSSK-----NPMLINLLRTVMKCEACGNTMIV---HAVSGSLHGYYVCPMRRLHR-- 338 + ++ + L ++ +C CG H +L + C + + Sbjct: 312 RSAVNNDPVIRIRNNKMYALSSMCECGFCGEIYTRRIHHQSRSTLKPVWKCSNQIRNGIA 371 Query: 339 -CD-RPSIKRDLVD--------------YNIINELLFNCSKIQPVENKKDANETLELKII 382 C+ +I +++ ++++ LL + ++ + + ++ + Sbjct: 372 ACEHSRAIDESIIENSFLEMMSLMADNFDDVLDNLLATIEESLNSDDCVNKLKRIDKSLA 431 Query: 383 ELQMKINNLIV-ALSVAPEVTAIAEKIRLLDKELRRASVSLKTL------KSKGVNSFSD 435 + + K N L L A +K L + + + L + N + Sbjct: 432 KQEDKRNKLTDMMLDDKINEEAYNKKYEELSYNISKLKNEKRMLTDNNLNQKTIKNRMCE 491 Query: 436 FYAIDLTSKNGRELCRTLAYKTFEKIIINT--DNKTCDIYF 474 +K E R + +K+I+ T D+ T + Y Sbjct: 492 IRNNIKDAKVFDEFDRVVFESIVKKVIVGTVLDDGTIEPYK 532 >UniRef50_B8I7G9 Resolvase domain protein n=2 Tax=Clostridium RepID=B8I7G9_CLOCE Length = 526 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 92/475 (19%), Positives = 171/475 (36%), Gaps = 57/475 (12%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 + AY R SS + S N Q ++ N + Y D G+S ++ Sbjct: 23 RVCAYCRVSSDSKEQLQSFNAQVEHYTAMIRKNLQWKF-CGVYADEGISGTS--RSKRDE 79 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F + E G + ++ +S+ R +R ++IE ++ + + GI + +N + Sbjct: 80 FKRLIKDCESGKV---DIVITKSISRWARNTA-DSIEVIRKLKSLGIGIYFEKEN----V 131 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 ++L+ L+ IL + A EES S + S +K+ ++G + + P +D Sbjct: 132 NTLSAESELVLTIL-SSIAQEESISISKNNRWSCQKR----FQNGEWVPSYLPYGYDMDA 186 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 + + + + IF + + IAK L + + G S W + +L Sbjct: 187 -KGNIIIKEPEAQVVRRIFNDFLSGKGAYTIAKGLTEDGIATKRG-NSCWSEGTVRDILQ 244 Query: 243 NKALIGIC----------VPSYRARGKGISE---IAGYYPRVISDDLFYAVQEIRLAPFG 289 N+ G +P R R KG + I + VIS + V +I Sbjct: 245 NEKYAGDLLMQKTFTTDTIPFLRKRNKGQKQKYFIEDNHEPVISREQEEKVNKIIQYRKA 304 Query: 290 ISNSSKNPMLIN--LLRTVMKCEACGNTMIVH---AVSGSLHGYYVC--PMRRLHRCDRP 342 SS N + C CG I H + C +R + +C Sbjct: 305 QQKSSDTAKYNNRYPFSGRIICGECGQAFIRRTIFKNKPYQHIQWSCGRHIRDITQCCMK 364 Query: 343 SIKRDLVDYN--------------IINELLFNCSKIQPVENKKDANETLELKIIELQMKI 388 +IK + V I+ LL KI + + +I EL + Sbjct: 365 AIKEEEVKLAYIQLFNKLKCNTNKILVPLLEGLKKISAEDYAGEEVTECNNRIYELNEQN 424 Query: 389 NNLIVALSVA-PEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLT 442 L S + K +++ EL LK+ +++ +++ + + I+ T Sbjct: 425 QVLNRLRSKGYIDSALFILKSNVIETELE----ELKSKRNRILDNTNVSFEIEQT 475 >UniRef50_Q1CPJ9 Site-specific recombinase n=7 Tax=Streptococcus pyogenes RepID=Q1CPJ9_STRPF Length = 471 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 89/500 (17%), Positives = 173/500 (34%), Gaps = 55/500 (11%) Query: 1 MKKAIAYMRFSSPGQMS-GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 M+K Y R S+ Q G S+ Q + ++ + + Y D G F G + Sbjct: 1 MRKVAIYSRVSTINQAEEGYSIQGQIEALTKYCEA--MEWKIYKNYSDAG---FSGGKLE 55 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 A +E IE G T+LV LDRLSR + + I ++L +N Sbjct: 56 RPAITEL---IEDGKNNKFDTILVYKLDRLSRNVKDTLYLVKDVFTANNIHFVSLKEN-- 110 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 ID+ + +L +L A E +IK + A T + P Sbjct: 111 --IDTSSAMGNLFLTLLSAIAEFEREQIKERMQFGVMNR----AKSGKTTAWKTPPYGYR 164 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEK 239 + + + +F + + S+ +I Y D+ V + W +++ Sbjct: 165 YNKDEKTLSVNELEAANVRQMFDMIISGCSIMSITNYARDNFV------GNTWTHVKVKR 218 Query: 240 LLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPML 299 +L N+ G+ + +G + +I + + Q +++ Sbjct: 219 ILENETYKGLVKYREQT-------FSGDHQAIIDEKTYNKAQIALAHRTDTKTNTRPFQG 271 Query: 300 INLLRTVMKCEACGNTMIVHAVS----GSLHGYYVCPMRRL-------------HRCDRP 342 +L + KC CG + V G+ YVC + C+ Sbjct: 272 KYMLSHIAKCGYCGAPLKVCTGRAKNDGTRRQTYVCVNKTESLARRSVNNYNNQKICNTG 331 Query: 343 SIKRDLVDYNIINELL-FNCSKIQPVENKKDANET----LELKIIELQMKINNLIVA-LS 396 ++ ++ +I+ L K + KKD N L+ +I + KIN L ++ Sbjct: 332 RYEKKHIEKYVIDVLYKLQHDKEYLKKIKKDDNIIDITPLKKEIEIIDKKINRLNDLYIN 391 Query: 397 VAPEVTAIAEKIRLLDKELRRASVSLKT--LKSKGVNSFSDFYAIDLTSKNGRELCRTLA 454 ++ + + I L+ + ++K L K +S K+ ++ + Sbjct: 392 DLIDLPKLKKDIEELNHLKDDYNKAIKLNYLDKKNEDSLGMLMDNIDIRKSSYDVQSRIV 451 Query: 455 YKTFEKIIINTDNKTCDIYF 474 + +++ + DN F Sbjct: 452 KQLIDRVEVTMDNIDIIFKF 471 >UniRef50_A6P2T0 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P2T0_9BACE Length = 401 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 76/364 (20%), Positives = 143/364 (39%), Gaps = 40/364 (10%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 + AY R SS +S Q R ++ + ++ + I Y D G++ + + Sbjct: 35 RVAAYARVSSASDDQLNSFAAQNRHYSDLISSKENWRMVDI-YADEGITGTSAE--KRED 91 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F L G I +LV+S+ R +R E +E ++ + + G+ V +N I Sbjct: 92 FQRLLADCRRGLI---DRVLVKSISRFARNT-KECLETIRELKSLGVGVYFEKEN----I 143 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 D+ ++ A+ A A ESE S ++ +K+ +++GT + A+ P +L D Sbjct: 144 DTATMSGEMMTALF-ASFAQAESESISGNMRWGIQKR----MQAGTYIPANLPYGYTLQD 198 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 + ++ ++ IFK + +S IA L + + SG E AW + I +++ Sbjct: 199 --HSIRIVEEQAVIVQRIFKEYLSGKSTERIASDLREEGIPCKSG-EVAWDSTAIRYIIS 255 Query: 243 NKALIGICVPS---------YRARGKGISEIA----GYYPRVISDDLFYAVQEIRLAPFG 289 N+ IG V Y+ R +++ G + ++ + F + + Sbjct: 256 NEKYIGDSVWQKYFSTDTLPYKCRLNRGQKVSYYAYGTHEGIVPKEDFEKANALMKSRAQ 315 Query: 290 ISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLH----RCDRPSIK 345 +KN R + C C + V G Y+VC +C I Sbjct: 316 KITLTKNSP--YAFRKKIVCGDCQSLFRRKVVRGIT--YWVCIGHDKKRHGLKCGITPIA 371 Query: 346 RDLV 349 D + Sbjct: 372 EDEI 375 >UniRef50_C7GCW1 Site-specific recombinase, resolvase family n=17 Tax=Bacteria RepID=C7GCW1_9FIRM Length = 565 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 95/482 (19%), Positives = 184/482 (38%), Gaps = 63/482 (13%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ-SG 61 K Y R S+ Q+ G SL+ Q+ + + + + ++ Y D G S GK + Sbjct: 7 KCDIYTRVSTTMQVDGYSLDAQKEKLKRYAEFQNMEIVN--EYSDEGKS---GKSVEGRP 61 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F LD IE+G +LV L R R + + L+ + + G+++I + D Sbjct: 62 EFQRMLDNIENGT-DEVQFVLVFKLSRFGRN-AADVLNSLQRMQDFGVNLICVEDG---- 115 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 IDS + L+ ++L A E I + + + ++Q A E G P L Sbjct: 116 IDSSKDSGKLMISVLSAVAEIERENI----LVQTMEGRKQKARE-GKWNGGFAPYGYELV 170 Query: 182 DKRTAFVPDPDRVKTIELIFKLRM-ERRSLNAIAKYLNDHAVKNFSGKES---AWGPSVI 237 + D + I LI+ + ++AIA +LN H K + + A+ S I Sbjct: 171 NGE--LQIAEDEAEIIRLIYDKFIHTNMGISAIAAWLNQHGYKKKKRQNNTLDAFAASFI 228 Query: 238 EKLLANKALIGICVPSYRARGK--------GISEIAGY------YPRVISDDLFYAVQEI 283 + +L N G R K I + Y + ++S+ + + Sbjct: 229 KGVLDNPVYCGKLAYGRRKNEKVSGTRNEYRIVKQENYMLHDGIHEGIVSETDWELAHQK 288 Query: 284 RLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSL--------HGYYVCPMRR 335 R + + ++L +++C CG+ M + + YY C RR Sbjct: 289 REKTGVKYEKTHSLDHEHILSGILRCPLCGSGMYGNVNRKKKKDGTLYKDYFYYACKHRR 348 Query: 336 ---LHRCD-RPSIKRDLVD---YNIINELLFNCSKIQPVENK---KDANETLELKIIELQ 385 H+C R + ++ +I +L+ N + + NK + E +E +I L+ Sbjct: 349 LVDGHKCGYRKQWSEEKINNAVEEVIRKLVKNPKFEEAILNKIGSRIDTEEIEKEIEGLE 408 Query: 386 MKINNLIVALS-VAPEVTAI-------AEKIRLLDKELRRASVSLKTLKSKGVNSFSDFY 437 + L A + + ++ + +K + ++ L R ++ +++ + Sbjct: 409 KQHRQLTGAKARLGQQMDNLDIMDKFYEKKYQDMETRLYRLYDEIEGVENSIEEVKNRLL 468 Query: 438 AI 439 I Sbjct: 469 NI 470 >UniRef50_D1C3V6 Resolvase domain protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C3V6_SPHTD Length = 559 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 80/465 (17%), Positives = 166/465 (35%), Gaps = 52/465 (11%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHA-QS 60 ++A Y R SS Q SL+ Q + + + + + G + Sbjct: 14 RRAAVYPRVSSKQQEDNYSLDTQLAACIAHAERLGYVVEERHVFRE----VYTGVDYWER 69 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 + +AI +G I ++ S+DR +R+ V + L G+ + D+ Sbjct: 70 PQMTRLREAIRNGEI---DAVVFYSVDRFARDPVFHMLG-LAEARQFGVKFHIVTDDLDL 125 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 + D + L A E + R + + +R A + I+ P L Sbjct: 126 SDDDDVLMF-----FLRGYAAKREWRDLAER---TQRGRRARAAKGKPIIGPKAPYGLVW 177 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 +++ + + + I + + +L + LN + + SGK W S I+ L Sbjct: 178 NEEEGRYHVNESEAVILRRIVRELLGGATLRQVKNGLNADGIPSPSGK--TWQTSTIKYL 235 Query: 241 LANKALIGICV-PSYRARGKG-------------ISEIAGYYPRVISDDLFYAVQEIRLA 286 ++ + G+ V Y+ KG + G YP++I+ D F A+Q A Sbjct: 236 VSQQRYTGVGVAYQYKTTRKGDRWLRTEVPDGWEVPLPDGVYPQIITPDEFAAIQSRLAA 295 Query: 287 PFGISNSSKNPMLINLLR-TVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHR--CDRPS 343 + + LLR ++C CG+ M + G Y C R C + Sbjct: 296 NRAQATRNNREPEAFLLRAGFIRCGLCGHVMAASSAGGRRR--YRCATRDKVDPPCPQTV 353 Query: 344 IKRDLVDYNIINE----------LLFNCSKIQPVENKKDANETLELKIIELQMKINNLIV 393 I++ ++D + + +++Q + + +E + +++ + +NL Sbjct: 354 IEQHVIDNAVWERVVTVLKNPEIIARELARLQADDPTAQDLDIVERALKDVERQRDNLTR 413 Query: 394 ALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYA 438 L++ + E L +++ + LK + + Sbjct: 414 HLALFSDP----EAAAPLVRQIEALGAQIAQLKQQREHILERRRG 454 >UniRef50_B8I5Z3 Resolvase domain protein n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I5Z3_CLOCE Length = 534 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 91/520 (17%), Positives = 197/520 (37%), Gaps = 75/520 (14%) Query: 1 MK-KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 MK K AY R S+ +SL Q++ E+++ D+ I Y D G+S + ++ Sbjct: 1 MKIKVGAYCRVSTEKDDQVNSLQSQKKYFEEYIRNRPDWEFVDI-YADEGISGTQAEN-- 57 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 F + + +L + + R +R +I+ +++ G+ VI + DN Sbjct: 58 RIEFQRMISDAK---YKRLDLILTKEISRFARNT-KISIDYTRMLKELGVGVIFISDN-- 111 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 I++L+ L I+ A A +ES S RVK K++ + + G + Sbjct: 112 --INTLDGDGELRLTIMSA-IAQDESRKTSERVKWGQKRRMEQGVVFGRELFG------- 161 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLR-MERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIE 238 + + + + + + LIF+ +E + + IA+ L + +++ S K + W +VI Sbjct: 162 YNLYKGTLTVNEEEAEIVRLIFRKYTIEGKGTHVIARELYEDNIQSKSYK-NRWSNTVIL 220 Query: 239 KLLANKALIG------ICVPSYRARGKGISE-------IAGYYPRVISDDLFYAVQEIRL 285 +LL N+ +G P+Y K + I ++ +I +L+ A QE + Sbjct: 221 RLLKNEKYVGDLAQKKTITPNYLNHKKKYNRGEEEIVYIKNHHTPIIPRELWDATQEQII 280 Query: 286 APFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVS---GSLHGYYVCPMRRLH----- 337 + C CG+ + + G ++ + C + + Sbjct: 281 QRSASKEQKSKYSNRYWCSGKLLCGECGSNFVGRSKKLENGQVYKVWKCSRAKSYGSLKI 340 Query: 338 -------RCDRPSIKRDLVDYNI--------------INELLFNCSKIQPVENKKDANET 376 C+ SI ++ + I+EL+ K+ + N K + ++ Sbjct: 341 DVNGNQVGCNNKSINHIVLGKIVKNVLYSINSNKEKIISELVSEIRKLNKLTNIK-STDS 399 Query: 377 LELKIIELQMK---INNLIVALSVAPEVTAIAEKIRLLDKELRRASVS-------LKTLK 426 KI +L K + NL++ S++ + + K L+ + + + + Sbjct: 400 FTRKIKDLNRKKQEVINLMIEGSISKDDMVLMNKRYDLEINKVKTDIKNIEEINLINSRN 459 Query: 427 SKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTD 466 + ++ + D + + + + I+ + Sbjct: 460 ADKLHIYLDRINSLVNQREENDSDEVFKLTVKKVILYKNN 499 >UniRef50_B9Z4V7 Resolvase domain protein n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z4V7_9NEIS Length = 529 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 85/484 (17%), Positives = 163/484 (33%), Gaps = 59/484 (12%) Query: 2 KKAIAYMRFSSPGQM-SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 K AI Y R S+ Q G S++ Q + L + D G+S G+ A Sbjct: 5 KTAIIYARVSTSRQADEGISIDSQIEQAEKKAAELGATVL--RVFRDDGIS---GRTANR 59 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 AF + E I +V + R +R K+ A + KL+ G V+ + Sbjct: 60 PAFQNAIQFCEGYDI---DYFIVWNTSRFARNKLDAASHK-KLLEGGGTKVVYVA----V 111 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 NID+ + ++I + S S + S K +D +G + P + Sbjct: 112 NIDNETDEGWFSESIFEIMDEH-YSRQVSRDTRRSMLKNARDGFWNG----GTVPFGYQV 166 Query: 181 --DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIE 238 D +R + +F + IA +N+ + + W I Sbjct: 167 VSDGQRRRLQVLEHEAILVREMFDMFFAGSGCKLIAMSMNERGL---LYRGRTWTKGHIT 223 Query: 239 KLLANKALIGICVPSYRARGKGISEIA------GYYPRVISDDLFYAVQEIRLAPFGISN 292 LL N A G + R + G + + ++S+ V L S Sbjct: 224 NLLKNPAYAGYVAFNRRDKKTGRDKPESEWIMTKSHEPIVSEAESERV-RHELKMRSPSG 282 Query: 293 SSKNPMLINLLRTVMKCEACGNTMIVHAVSG--SLHGYYVCPMR-RLHRCDRPSIKRDLV 349 +P + +++C CG M + +G ++ YY C + C I Sbjct: 283 EGGSPHSTFVFTGILRCGECGAAMQTESANGRNKIYHYYNCSRSQKGGGCRPRRISAGQF 342 Query: 350 DYNIINELLFNCSKIQP---------------VENKKDANETLELKIIELQMKINNLIVA 394 D +++ ++ + E++ + I E + NL Sbjct: 343 DSWMMDTIIQRILSPERMREVIAEVRELTNNWQEDRDRRIAGVMRHIKEANKRRQNLFDI 402 Query: 395 LSV----APEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELC 450 L + AP + + ++R ++ ++ L ++S+ + +D++ R Sbjct: 403 LELHGKDAPNLGDLTVRLREINANIKALQDELAVIESEEMPE------VDISENQVRIAT 456 Query: 451 RTLA 454 T+ Sbjct: 457 ETMV 460 >UniRef50_Q188V9 Conjugative transposon site-specific recombinase n=7 Tax=Firmicutes RepID=Q188V9_CLOD6 Length = 533 Score = 206 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 90/522 (17%), Positives = 183/522 (35%), Gaps = 85/522 (16%) Query: 3 KAIAYMRFSSPG--QMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 K Y R S +S+ QR ++ + K N Y D Y D G F G Sbjct: 11 KVALYSRLSRDDGLDKESNSIANQREMLKRYAKENKFYVYD--EYIDDG---FSGTTFNR 65 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 A + + IE G + +LV+ + RL R ++ + + I + D Sbjct: 66 PALNRMFEDIEAGKV---NVVLVKDMSRLGRNNALFMYYVEEVFPDLDVRFIAINDM--- 119 Query: 121 NIDSLNEPYSLI--KAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWL 178 +D+ + ++ K++L A + S+ S ++ + +G A P Sbjct: 120 -VDTAQDDNEIMPFKSVLNEYYARDISKKIRSSIRTT--------ALTGGFTGAFAPYGY 170 Query: 179 SLD-DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAV---KNFSGKESA--- 231 +D + + + DP+ ++ IF+L + S + IA+ L + + + K+ Sbjct: 171 LVDPENKKKLIVDPETAPIVKRIFELSQQGTSTHQIARILCKDGILVPRAYRAKKKGILE 230 Query: 232 ----------WGPSVIEKLLANKALIGICVPSYRA----RGKGISE--------IAGYYP 269 W ++ +L N+ +G V + K I + + Sbjct: 231 QSKGFTFPTDWVGKNVKMILENQVYLGHMVSHKSQTKSFKNKKIVPVPKEDWIVVENTHE 290 Query: 270 RVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYY 329 +I + F VQ+ + + K N+ ++KC CG + +G+ + Sbjct: 291 AIIDKETFEIVQKFISVKKQPNKTGK----PNIFVGLVKCPDCGRNLAYSNPNGNEPRFR 346 Query: 330 VCPMRRLHR-CDRPSIKRDLVDYNIINELLFNCSKIQP-----VENKKDANET------- 376 R C +I + + N++ + + ++ ++ ++ +ET Sbjct: 347 CRTYARNTELCTTHAISYKALYEIVQNDIKNHVNSMEELGDHFIKEMRELSETSGSQKIH 406 Query: 377 --------LELKIIELQMKINNLIVALSVAPEVTAIAEKIRL-LDKELRRASVSLKTLKS 427 LE +I E+ LI ++ K+ + + E S + LKS Sbjct: 407 QFNQELVSLEKRIDEIDSIFTKLIEQNALGKITDERFSKMSMNYETEQAEVVQSYRELKS 466 Query: 428 KGVNSFSDFYAIDLTS------KNGRELCRTLAYKTFEKIII 463 K + D K+ EL R++ + + I + Sbjct: 467 KIKSEEEKVQGTDRFLETISKYKDVTELNRSMLCELIDSIYV 508 >UniRef50_UPI0001905A69 hypothetical protein RetlB5_21195 n=1 Tax=Rhizobium etli Brasil 5 RepID=UPI0001905A69 Length = 392 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 98/389 (25%), Positives = 169/389 (43%), Gaps = 33/389 (8%) Query: 116 DNTVYNIDSLNEP-YSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASC 174 D VY + L+E +L+ A+L+A RA+EES K RV +W+ KR +A +T+ Sbjct: 3 DQRVYTEEVLDEDQTALMVALLVAMRAHEESAKKGRRVGQAWENKRANAAN--KPLTSKA 60 Query: 175 PRWLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGP 234 P WL L R+ F P+R + + IF+ +E R +AIA+ LN V F G+ W Sbjct: 61 PGWLKLRGDRSGFDLIPERAEIVRRIFQQTLEGRGQHAIAESLNREGVPVF-GRGKIWHR 119 Query: 235 SVIEKLLANKALIGICVPSY--RARGKGI----SEIAGYYPRVISDDLFYAVQEIRLAPF 288 S I+K+L + +++G+ VP R+ GK + + GY+P I ++F V + Sbjct: 120 SYIKKMLEDASVVGVYVPHRADRSSGKKVRIPTQPVEGYFPAAIDREVFERVAALSNGRT 179 Query: 289 GISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHG---YYVCPMRRLH-RCDRPSI 344 + S + N+L + KC CG TM G Y VC + + C+ + Sbjct: 180 ANTKSG----MANILAGLAKCPRCGATMTRVNKGSGPKGGRPYLVCTVAKAGAGCEYEAS 235 Query: 345 KRDLVDYNIINELLFNCSKIQPVENKKDANETLELKIIE-LQMKINNLIVALSVAPEVTA 403 D ++ I+N + + I E + ++I+ ++ A+ Sbjct: 236 PCDQIETAIVNYASAFYASAPSADAALQTEWENARSIAEGIGVEIDRIVDAIRETGHSPM 295 Query: 404 IAEKIRLLDKELRRASVSLKTLKSK-------GVNSFSDFYAIDLTSKNGRELC-RTLAY 455 + ++R L++ L A S + + N+ D LT + Sbjct: 296 LLAELRRLEQLLDEAERSAGEAERRASAATTNRTNNTLDKLVAQLTEEERDIAAINATMR 355 Query: 456 KTFEKIIINTDNKTCDIYFMNGIVFKHYP 484 + FE +++ D T D++F +KH P Sbjct: 356 QLFEGVVV--DRSTGDLWFR----WKHAP 378 >UniRef50_D2P2Z1 Site-specific DNA recombinase n=2 Tax=Listeria monocytogenes RepID=D2P2Z1_LISMO Length = 533 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 105/523 (20%), Positives = 185/523 (35%), Gaps = 60/523 (11%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 K+ AY R S+ + +S + Q + E + D+ I Y D S K + Sbjct: 23 KRVCAYCRVSTDSREQQNSFSAQVKYYTELIGKKDDWEYAGI-YADEARSGT--KLQKRD 79 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F + E G + ++ +S+ R +R V ++I+ ++ + I V ++ Sbjct: 80 EFLRMMKDCEAGKV---DMIITKSVTRFARNTV-DSIQAIRKLKALSIAVYFEKEH---- 131 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 I++L+E + IL + A ESE S+ K + KK+ QD CP + Sbjct: 132 INTLSEKSEQMLTIL-SSLAQGESEGISTNTKWAVKKRFQDGS-----FILGCPAYGYTK 185 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 D+ + + + IFK + + IAK L++ + E W SV++++L Sbjct: 186 DEAGELIIKDEEAVVVHRIFKEYLNGKGSYVIAKGLSEDGIPTIRNAE-KWQDSVVKEIL 244 Query: 242 ANKALIGIC----------VPSYRARGKGISE---IAGYYPRVISDDLFYAVQEIRLAPF 288 N G VP R KG I+ + +I+ + F AV+EI Sbjct: 245 QNPIYTGDLLLQKTFTTEVVPFKRKTNKGQLPQYFISENHEPIITREQFEAVKEIYEYRR 304 Query: 289 GISNSSKNPMLIN--LLRTVMKCEACGNTMIVHA---VSGSLHGYYVCPMR--RLHRCDR 341 + N + + C CG+T + C +C Sbjct: 305 EQMGIDDSGKYQNRYAFSSNIICGECGSTFRRQKIYIGKPYEKIQWCCSQHIEDKSKCSL 364 Query: 342 PSIKRDLVDYNII---NELLFNCSKIQ-----------PVENKKDANETLELKIIELQMK 387 I+ D+++ I N+L N ++I E ++ +I+EL + Sbjct: 365 KGIREDVIERAFIVMWNKLTSNYTEILIPMLESLKGLRIDEQQEQEISECNNRIMELTEQ 424 Query: 388 INNLIVALSVA-PEVTAIAEKIRLLDKELRRASVSLKTLKSK---GVNSFSDFYAIDLTS 443 + L ++ + E+ L EL A L I L Sbjct: 425 SHILSSVVAKGYIDSAVFIERQNTLTLELTAAKKKRSQLLDSNGFDREIARTELLIALIQ 484 Query: 444 KNG---RELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKHY 483 N E L + +KII+ +N T N + Y Sbjct: 485 SNPNILEEYDENLFLQAVDKIIL-HENHTITFRLKNSLELTEY 526 >UniRef50_A9WCX4 Resolvase domain n=2 Tax=Chloroflexus RepID=A9WCX4_CHLAA Length = 507 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 79/455 (17%), Positives = 145/455 (31%), Gaps = 56/455 (12%) Query: 4 AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAF 63 A+ Y R S+ Q S+ Q E+ + N + + G Sbjct: 3 AVIYARVSTEEQGDNFSIPAQLAACREYAERNGLQVVAEC------IDTMSGARLDRPGL 56 Query: 64 SEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNID 123 + D + + ++V DRLSR + + N I + Sbjct: 57 QQVRDLVSQQLVQA---VIVYHQDRLSRN-LAHFLYLRDEFQNARIALHFTTLGQ----- 107 Query: 124 SLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESG-TIMTASCPRWLSLDD 182 + + P + +I A E R K + + G A W Sbjct: 108 ARDTPEDKLIQNMIGSFAEHERLRIIERTKQGRRARLLSGKPLGLGNHPAYGYHWHGTKH 167 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESA-----WGPSVI 237 R + + IF +E IAK L D V G+ W + + Sbjct: 168 DRH-LHINEAEAAIVRRIFAWALEGVPTQRIAKLLTDMGV-TPRGRAGRPPRPEWDHTTV 225 Query: 238 EKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNP 297 +L N G Y A + P ++ + + AVQE ++ +N Sbjct: 226 AGMLRNPVYKGQY---YSAAHNLFVPV----PAIVDAETWEAVQEQLTRNQAMAK--RNA 276 Query: 298 MLINLLRTVMKCEACGNTMIVH----AVSGSLHGYYVCPMRRL---HRCDR-PSIKRDLV 349 + LR ++C CGN M + SG + YY+C + C+ S + + + Sbjct: 277 KRVYSLRGRIRCGICGNRMSGNGAGTRASGKTYHYYMCHAAKGALIASCNHGTSYRAERL 336 Query: 350 D----YNIINELLFNCSKIQPVE----NKKDANETLE-------LKIIELQMKINNLIVA 394 + +I +L ++ +E N+ E LE +I E + LI Sbjct: 337 EALVWQWVIETVLDETRLVRAIEAARANEAGQREALEHERAAYARQIAEAGTRTARLIEL 396 Query: 395 LSVAP-EVTAIAEKIRLLDKELRRASVSLKTLKSK 428 + + +A + + + + A L + ++ Sbjct: 397 YTAGVCTLDEVAATKKQYELQRQSAQRELDRIDAQ 431 >UniRef50_Q041M5 Site-specific recombinase, DNA invertase Pin related protein n=15 Tax=Firmicutes RepID=Q041M5_LACGA Length = 506 Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats. Identities = 88/499 (17%), Positives = 183/499 (36%), Gaps = 60/499 (12%) Query: 20 SLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFSEFLDAIEHGYILPGT 79 S Q E ++ + I Y D G+S K + F++ + A + G I Sbjct: 28 SRPVQVDHYKELIQKEPPWEFAGI-YADDGISGTNTK--KREQFNKMIAACKVGKI---D 81 Query: 80 TLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDSLNEPYSLIKAILIAQ 139 ++ +S+ R +R + + ++ ++ + + + +N I++++ ++ I+ A Sbjct: 82 LIVTKSISRFARNTI-DCLKYIRDLKAINVAIFFEKEN----INTMDAKGEVLITIM-AS 135 Query: 140 RANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDKRTAFVPDPDRVKTIEL 199 A +ESE S VK+ + + Q G + D + V +P+ K I+ Sbjct: 136 LAQQESESLSQNVKMGIQYRYQQ----GKVFVNHNHFLGYTKDAQGNLVIEPEEAKVIKR 191 Query: 200 IFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLANKALIG----------I 249 IF + ++ IA L + GK W S + K+L N+ +G Sbjct: 192 IFYSYLNGMTMKQIADSLKADGILT-GGKTKNWRSSSVAKILKNEKYMGDALLQKTYTVD 250 Query: 250 CVPSYRARGKGISE---IAGYYPRVISDDLFYAVQEIRLAPFG----ISNSSKNPMLINL 302 + R + +GI + +P +I +F VQ+I + + Sbjct: 251 FLNKKRVKNEGIMPQYYVENDHPAIIPKSVFMQVQQIIKQRRNGITTKNGKHRRINGKYC 310 Query: 303 LRTVMKCEACGNTMIVHA-VSGSLHGYYVC-----PMRRLHRCDRPSIKRDLVDYNIINE 356 + C CG+ + + + C + RC ++K L+ + Sbjct: 311 FSQKVFCGKCGDILQRNMWYRPEKVAVWRCASRVRRNKTGRRCMIRNVKEPLLKEATVEA 370 Query: 357 LLFNCSKIQPVENKKDAN-------------ETLELKIIELQMKINNLIVALSVAPEVTA 403 + + AN + ++ ++ E+QMK LI A + + A Sbjct: 371 FNQLIEGHELASKQIKANIMKVIKNSKGPTLDQIDQQLEEVQMK---LIQAANQHQDCDA 427 Query: 404 IAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRE-LCRTLAYKTFEKII 462 + ++I L ++ + +T + ++S + + K G L + EKI Sbjct: 428 LTQQIMDLRRQKEKVQSR-ETDQQAKLHSIDEINELVNLHKYGLVDFDEQLVRRLVEKIT 486 Query: 463 INTDNKTCDIYFMNGIVFK 481 I + + F +G V + Sbjct: 487 IF--QRYMEFTFKDGEVIR 503 >UniRef50_A5MYI4 Phage invertase/recombinase-related protein n=6 Tax=Clostridium RepID=A5MYI4_CLOK5 Length = 549 Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats. Identities = 109/552 (19%), Positives = 199/552 (36%), Gaps = 99/552 (17%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYY-LDTITYEDLGLSAFKGKHAQSG 61 KA Y R S G+S+ Q +L E+ + N + + I YED G F G + Sbjct: 5 KAAIYSRKSLFTG-KGESIENQIQLCKEYGEKNLNLKNDNFIIYEDEG---FSGGNTNRP 60 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F E L ++ L+ LDR+SR V + L+L+ H I +++ + + Sbjct: 61 KFQELLKDVKK---RKFDVLMCYRLDRISRN-VADFSTTLELLQQHNISFVSIKEQFDTS 116 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS-- 179 P + + A E E + R++ + + + +G + P Sbjct: 117 T-----PMGKAMVYISSVFAQLERETIAERIRDNMIQLAK----TGRWLGGQTPLGFDSQ 167 Query: 180 ---------LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKES 230 + P + +K ++LI+ +E S++ + KYL + ++ +G + Sbjct: 168 KILYYNSEMKEKSMYKLSPVKEELKKVKLIYNKYIEFGSISLVLKYLLSNNIRGKNGGD- 226 Query: 231 AWGPSVIEKLLANKALI------------------------GICVPSYRA-------RGK 259 + I +L N + GI + R + + Sbjct: 227 -FASMSINDILRNPVYVKSDDGVFKYLSDSGIITCGTPNGNGIMTYNKRNSKYVPKKKTE 285 Query: 260 GISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVH 319 I+ I G + VI + + VQ +N + +LL V+KC CG M V Sbjct: 286 WIAAI-GKHEGVIDSNTWLEVQFRLNKNKKKANPRQGTSKKSLLSGVLKCALCGAPMRVC 344 Query: 320 AVSGSLHG-----YYVCPMR---RLHRCDRPSIKRDLVDYNIINELL-FNCSKIQ----- 365 G YY+C M+ RCD P++K ++ II + N +KI Sbjct: 345 YGRPKKDGSERIYYYMCTMKAHSAKSRCDNPNVKGPELEKAIIENIKQLNTTKILKELQV 404 Query: 366 -----PVENKKDANETLELKIIELQMKINNLIVALS-----VAPEVTAIAEKIRLLDKEL 415 V + + ET+ +I + +IN L+ L+ + I KI L E+ Sbjct: 405 AKNEAAVSIENNFTETITKEIKDKSDQINTLLEQLAHTNANNSIASEFITSKIESLGNEI 464 Query: 416 RRASVSLKTLKSKGVNSFSDFYAIDLTSKNGREL------------CRTLAYKTFEKIII 463 ++ ++ L+ K + ++ K+ E R + +K+ Sbjct: 465 KKLNLKLEKSKDTKQENIQKKLNFEIIEKSLHEFNSSFDMIKDTSKKRLILENIIDKVYW 524 Query: 464 NTDNKTCDIYFM 475 N + DI Sbjct: 525 NGNTGDVDIQLW 536 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P77698 Uncharacterized protein ybcK n=22 Tax=Escherichi... 499 e-140 UniRef50_B3WZ52 Hypothetical bacteriophage protein n=1 Tax=Shige... 367 e-100 UniRef50_B0K4R6 Recombinase n=9 Tax=Clostridia RepID=B0K4R6_THEPX 363 8e-99 UniRef50_C6URU6 Putative uncharacterized protein n=2 Tax=Enterob... 362 2e-98 UniRef50_C7WYU0 Site-specific recombinase n=2 Tax=Enterococcus f... 354 3e-96 UniRef50_C2F160 Recombinase n=2 Tax=Lactobacillus reuteri RepID=... 353 9e-96 UniRef50_A7VSK4 Putative uncharacterized protein n=1 Tax=Clostri... 353 9e-96 UniRef50_B8DJ05 Recombinase n=1 Tax=Desulfovibrio vulgaris str. ... 352 2e-95 UniRef50_A6NTU2 Putative uncharacterized protein n=1 Tax=Bactero... 350 8e-95 UniRef50_A6P1I2 Putative uncharacterized protein n=1 Tax=Bactero... 349 1e-94 UniRef50_C0ZHM9 Putative DNA recombinase n=1 Tax=Brevibacillus b... 347 6e-94 UniRef50_C4ZE41 Site-specific recombinase n=17 Tax=Bacteria RepI... 346 1e-93 UniRef50_Q30XM6 Putative uncharacterized protein n=1 Tax=Desulfo... 346 1e-93 UniRef50_Q88NT6 Recombinase-related protein n=1 Tax=Pseudomonas ... 345 2e-93 UniRef50_C7H883 Resolvase domain protein n=4 Tax=Faecalibacteriu... 345 3e-93 UniRef50_Q2JCD2 Resolvase-like n=3 Tax=Actinomycetales RepID=Q2J... 344 6e-93 UniRef50_UPI0001C355EF site-specific recombinase n=1 Tax=Clostri... 343 1e-92 UniRef50_UPI0001973930 site-specific recombinase n=1 Tax=Clostri... 342 3e-92 UniRef50_Q87J19 Putative site-specific recombinase n=1 Tax=Vibri... 341 4e-92 UniRef50_C7H8A3 Resolvase domain protein n=22 Tax=Clostridia Rep... 340 7e-92 UniRef50_C7GIC8 TnpX site-specific recombinase n=22 Tax=Bacteria... 340 8e-92 UniRef50_A6NXM2 Putative uncharacterized protein n=4 Tax=Bacteri... 340 1e-91 UniRef50_C7IHA5 Resolvase domain protein n=1 Tax=Clostridium pap... 339 2e-91 UniRef50_Q1QRV3 Recombinase n=1 Tax=Nitrobacter hamburgensis X14... 337 5e-91 UniRef50_A5ZV57 Putative uncharacterized protein n=4 Tax=Clostri... 337 7e-91 UniRef50_A3DBB4 Recombinase n=1 Tax=Clostridium thermocellum ATC... 336 1e-90 UniRef50_Q5WE11 Site-specific recombinase for integration and ex... 335 2e-90 UniRef50_Q3Z6A0 Resolvase domain protein n=6 Tax=Dehalococcoides... 335 3e-90 UniRef50_C4Z7Z8 Site-specific recombinase n=1 Tax=Eubacterium re... 335 3e-90 UniRef50_A6NPY6 Putative uncharacterized protein n=1 Tax=Bactero... 334 3e-90 UniRef50_Q0AWY2 Site-specific recombinase, putative n=7 Tax=Clos... 334 5e-90 UniRef50_A6T2W2 Site-specific recombinase n=1 Tax=Janthinobacter... 334 6e-90 UniRef50_A5FSM5 Resolvase, N-terminal domain n=2 Tax=Dehalococco... 334 7e-90 UniRef50_A8SHS6 Putative uncharacterized protein n=1 Tax=Faecali... 333 9e-90 UniRef50_C7HJH4 Resolvase domain protein n=1 Tax=Clostridium the... 332 1e-89 UniRef50_A5N289 Putative uncharacterized protein n=3 Tax=Firmicu... 332 2e-89 UniRef50_C5RQ70 Resolvase domain protein n=4 Tax=Firmicutes RepI... 332 2e-89 UniRef50_C4ZFI3 Site-specific recombinase n=3 Tax=Clostridiales ... 331 5e-89 UniRef50_A7B0Q2 Putative uncharacterized protein n=4 Tax=Clostri... 330 5e-89 UniRef50_A0LPU3 Recombinase n=6 Tax=Deltaproteobacteria RepID=A0... 330 9e-89 UniRef50_Q188V9 Conjugative transposon site-specific recombinase... 329 1e-88 UniRef50_C0FPH2 Putative uncharacterized protein n=2 Tax=Clostri... 329 1e-88 UniRef50_A5N4T4 Putative uncharacterized protein n=7 Tax=Bacteri... 329 2e-88 UniRef50_C9S0X0 Resolvase domain protein n=3 Tax=root RepID=C9S0... 329 2e-88 UniRef50_D2RBA8 TnpX site-specific recombinase family protein n=... 329 2e-88 UniRef50_C0B9J7 Putative uncharacterized protein n=2 Tax=Clostri... 328 3e-88 UniRef50_A7VUQ9 Putative uncharacterized protein n=2 Tax=Clostri... 328 4e-88 UniRef50_Q2YCV5 Recombinase n=1 Tax=Nitrosospira multiformis ATC... 328 4e-88 UniRef50_B0TCI3 DNA recombinase, putative n=22 Tax=Bacteria RepI... 327 4e-88 UniRef50_A9BFJ9 Resolvase domain n=14 Tax=Bacteria RepID=A9BFJ9_... 327 4e-88 UniRef50_A4X6D7 Resolvase, N-terminal domain n=1 Tax=Salinispora... 327 7e-88 UniRef50_C6LJ39 TnpX site-specific recombinase n=3 Tax=Clostridi... 327 9e-88 UniRef50_A5ZMY9 Putative uncharacterized protein n=2 Tax=Clostri... 326 9e-88 UniRef50_B8ENV0 Resolvase domain protein n=1 Tax=Methylocella si... 326 1e-87 UniRef50_UPI0001692EF6 hypothetical protein Plarl_21271 n=1 Tax=... 326 1e-87 UniRef50_D0LPM7 Resolvase domain protein n=2 Tax=Haliangium ochr... 325 2e-87 UniRef50_C2RWE8 Cassette chromosome recombinase B n=1 Tax=Bacill... 325 2e-87 UniRef50_UPI00016C43FD Resolvase, N-terminal domain n=2 Tax=Gemm... 325 3e-87 UniRef50_C4ZEQ6 Cassette chromosome recombinase B n=35 Tax=Bacte... 324 5e-87 UniRef50_UPI0001C37799 recombinase n=1 Tax=Ruminococcus flavefac... 324 7e-87 UniRef50_B0P747 Putative uncharacterized protein n=2 Tax=Bacteri... 323 8e-87 UniRef50_A5Z6W7 Putative uncharacterized protein n=2 Tax=Clostri... 323 1e-86 UniRef50_C8WS87 Resolvase domain protein n=1 Tax=Alicyclobacillu... 322 1e-86 UniRef50_Q1JB66 Site-specific recombinase n=20 Tax=Firmicutes Re... 322 2e-86 UniRef50_C9XQS3 Conjugative transposon site-specific recombinase... 322 2e-86 UniRef50_D1PSJ0 TnpX site-specific recombinase n=1 Tax=Subdoligr... 322 2e-86 UniRef50_Q1V893 Putative uncharacterized protein n=1 Tax=Vibrio ... 321 4e-86 UniRef50_UPI00019734DD site-specific recombinase n=1 Tax=Clostri... 321 4e-86 UniRef50_UPI0001C3729C phage integrase family site specific reco... 320 5e-86 UniRef50_A5D5X5 Putative uncharacterized protein n=1 Tax=Pelotom... 320 5e-86 UniRef50_Q8NYW8 Cassette chromosome recombinase B n=83 Tax=Bacil... 320 6e-86 UniRef50_UPI0001C37BEF site-specific recombinase, putative n=4 T... 320 7e-86 UniRef50_C2Z4G3 Site-specific recombinase for integration and ex... 320 8e-86 UniRef50_B3G100 Recombinase/resolvase n=1 Tax=Pseudomonas aerugi... 320 1e-85 UniRef50_B9M114 Recombinase n=1 Tax=Geobacter sp. FRC-32 RepID=B... 320 1e-85 UniRef50_C0CS10 Putative uncharacterized protein n=1 Tax=Blautia... 319 2e-85 UniRef50_C0VZG2 Site-specific recombinase n=1 Tax=Actinomyces co... 319 2e-85 UniRef50_Q39QW8 Resolvase-like:Recombinase n=1 Tax=Geobacter met... 319 2e-85 UniRef50_D0AKJ5 Resolvase n=9 Tax=Bacilli RepID=D0AKJ5_ENTFC 318 3e-85 UniRef50_Q5XBF4 Site-specific recombinase n=9 Tax=Bacteria RepID... 318 3e-85 UniRef50_A7GVM1 Resolvase domain n=1 Tax=Bacillus cytotoxicus NV... 318 3e-85 UniRef50_C8RU76 Resolvase family prophage LambdaSa04, site-speci... 318 4e-85 UniRef50_Q67SM2 Site-specific recombinase n=1 Tax=Symbiobacteriu... 318 4e-85 UniRef50_B5DC77 Putative recombinase (Fragment) n=1 Tax=Geobacil... 318 4e-85 UniRef50_B7JIH4 Resolvase domain protein n=4 Tax=Bacillus cereus... 317 4e-85 UniRef50_A8SBA3 Putative uncharacterized protein n=1 Tax=Faecali... 317 4e-85 UniRef50_C0FPH3 Putative uncharacterized protein n=2 Tax=Clostri... 317 5e-85 UniRef50_UPI0001C370AB recombinase n=1 Tax=Ruminococcus flavefac... 317 6e-85 UniRef50_C0M6W3 Putative phage integrase n=1 Tax=Streptococcus e... 317 8e-85 UniRef50_Q2BRM1 Site-specific recombinase n=1 Tax=Neptuniibacter... 316 1e-84 UniRef50_A7HP92 Resolvase domain n=1 Tax=Parvibaculum lavamentiv... 316 1e-84 UniRef50_C7GGS5 Site-specific recombinase, phage integrase famil... 316 1e-84 UniRef50_O05415 TnpX n=7 Tax=Firmicutes RepID=O05415_CLOPE 316 1e-84 UniRef50_C6JGM9 Putative uncharacterized protein n=1 Tax=Ruminoc... 316 1e-84 UniRef50_Q65CS9 Site-specific DNA recombinase n=1 Tax=Bacillus l... 316 2e-84 UniRef50_UPI0001C355F0 cassette chromosome recombinase B n=1 Tax... 315 2e-84 UniRef50_C6P9P0 Recombinase n=1 Tax=Thermoanaerobacterium thermo... 315 2e-84 UniRef50_C0WGL8 Site-specific recombinase n=1 Tax=Corynebacteriu... 315 2e-84 UniRef50_A5L3F9 Putative uncharacterized protein n=1 Tax=Vibrion... 315 3e-84 UniRef50_A5VBR4 Resolvase, N-terminal domain n=12 Tax=Alphaprote... 315 3e-84 UniRef50_B0TD52 Resolvase, n-terminal:recombinase, putative n=5 ... 315 3e-84 UniRef50_B0TD54 Resolvase, n-terminal:recombinase, putative n=3 ... 315 3e-84 UniRef50_A6NUH0 Putative uncharacterized protein n=2 Tax=Bactero... 315 3e-84 UniRef50_A6NUG8 Putative uncharacterized protein n=2 Tax=Bactero... 315 3e-84 UniRef50_C1I4H9 DNA integration/recombination protein n=4 Tax=Cl... 314 5e-84 UniRef50_B6FLM9 Putative uncharacterized protein n=1 Tax=Clostri... 314 7e-84 UniRef50_C7GH36 Site-specific recombinase, resolvase family n=1 ... 313 9e-84 UniRef50_A5Z6W6 Putative uncharacterized protein n=2 Tax=Clostri... 313 9e-84 UniRef50_C1CGJ9 INT n=2 Tax=Streptococcus pneumoniae RepID=C1CGJ... 313 1e-83 UniRef50_UPI0001C36E46 resolvase family site-specific recombinas... 312 2e-83 UniRef50_Q98DK0 Site-specific recombinase n=1 Tax=Mesorhizobium ... 312 2e-83 UniRef50_D1VV52 Site-specific recombinase n=1 Tax=Peptoniphilus ... 312 2e-83 UniRef50_A5Z7F2 Putative uncharacterized protein n=1 Tax=Eubacte... 311 3e-83 UniRef50_Q041M6 Site-specific recombinase, DNA invertase Pin rel... 311 3e-83 UniRef50_D0XHM7 Putative uncharacterized protein n=1 Tax=Vibrio ... 311 4e-83 UniRef50_A5KP69 Putative uncharacterized protein n=2 Tax=Clostri... 311 4e-83 UniRef50_A8SCA0 Putative uncharacterized protein n=1 Tax=Faecali... 310 5e-83 UniRef50_C2KNU8 Site-specific recombinase n=2 Tax=Actinomycetale... 310 6e-83 UniRef50_Q46W15 Recombinase n=1 Tax=Ralstonia eutropha JMP134 Re... 310 7e-83 UniRef50_Q3SMV6 Resolvase n=4 Tax=Rhizobiales RepID=Q3SMV6_NITWN 310 7e-83 UniRef50_Q1J4R9 Site-specific recombinase n=10 Tax=Bacteria RepI... 310 1e-82 UniRef50_C0ECX6 Putative uncharacterized protein n=1 Tax=Clostri... 310 1e-82 UniRef50_B0PBT9 Putative uncharacterized protein n=1 Tax=Anaerot... 310 1e-82 UniRef50_D2LV95 Resolvase domain protein n=1 Tax=Bacillus cellul... 310 1e-82 UniRef50_A1VBU1 Resolvase, N-terminal domain n=1 Tax=Desulfovibr... 309 1e-82 UniRef50_Q1Z7J0 Site-specific recombinase n=1 Tax=Photobacterium... 309 1e-82 UniRef50_C6QVK4 Resolvase domain protein n=1 Tax=Geobacillus sp.... 309 1e-82 UniRef50_C0ESV4 Putative uncharacterized protein n=1 Tax=Eubacte... 309 2e-82 UniRef50_C7HAC5 DNA integration/recombination protein n=4 Tax=Fa... 309 2e-82 UniRef50_B8R885 Gp20 n=2 Tax=Bacillus phage TP21-L RepID=B8R885_... 309 2e-82 UniRef50_D0LLL4 Resolvase domain protein n=1 Tax=Haliangium ochr... 309 2e-82 UniRef50_C1XY58 Site-specific recombinase, DNA invertase Pin n=2... 309 2e-82 UniRef50_C5D538 Recombinase n=2 Tax=Bacillaceae RepID=C5D538_GEOSW 308 3e-82 UniRef50_C7RGX1 Resolvase domain protein n=12 Tax=Firmicutes Rep... 308 3e-82 UniRef50_C0ESV5 Putative uncharacterized protein n=1 Tax=Eubacte... 308 3e-82 UniRef50_UPI0001C3787A resolvase domain protein n=1 Tax=Ruminoco... 308 3e-82 UniRef50_D2BGC7 Resolvase domain protein, PinR type n=2 Tax=Deha... 308 3e-82 UniRef50_D1PK23 Site-specific recombinase, resolvase family n=3 ... 307 5e-82 UniRef50_B9IZ84 DNA recombinase, putative n=9 Tax=root RepID=B9I... 307 6e-82 UniRef50_Q3J212 Putative site-specific recombinase n=1 Tax=Rhodo... 307 6e-82 UniRef50_Q9XJF6 Site-specific integrase n=3 Tax=root RepID=Q9XJF... 307 6e-82 UniRef50_A6LN32 Resolvase, N-terminal domain n=1 Tax=Thermosipho... 307 9e-82 UniRef50_C3AWE0 U153 integrase n=1 Tax=Bacillus mycoides Rock1-4... 307 9e-82 UniRef50_C9LP68 DNA integration/recombination protein n=1 Tax=Di... 306 1e-81 UniRef50_A9NFR7 Serine recombinase n=1 Tax=Acholeplasma laidlawi... 306 1e-81 UniRef50_C6JGM7 Putative uncharacterized protein n=1 Tax=Ruminoc... 306 1e-81 UniRef50_B2IQ45 Site-specific recombinase, resolvase family n=19... 306 1e-81 UniRef50_B5XQB9 Site-specific recombinase, resolvase family n=6 ... 306 1e-81 UniRef50_B9M0D0 Recombinase n=1 Tax=Geobacter sp. FRC-32 RepID=B... 306 2e-81 UniRef50_Q1CPJ9 Site-specific recombinase n=7 Tax=Streptococcus ... 305 2e-81 UniRef50_B9XI16 Resolvase domain protein n=1 Tax=bacterium Ellin... 305 2e-81 UniRef50_D1AQX9 Recombinase n=1 Tax=Sebaldella termitidis ATCC 3... 305 2e-81 UniRef50_D2P2Z1 Site-specific DNA recombinase n=2 Tax=Listeria m... 305 2e-81 UniRef50_A0L9E5 Recombinase n=19 Tax=Bacteria RepID=A0L9E5_MAGSM 305 2e-81 UniRef50_B8FU54 Resolvase domain protein n=2 Tax=Clostridiales R... 305 2e-81 UniRef50_B1R3Z5 Putative site-specific recombinase, resolvase fa... 305 2e-81 UniRef50_B7IRZ6 Resolvase domain protein n=17 Tax=Bacillales Rep... 305 3e-81 UniRef50_C0X7M1 Cassette chromosome recombinase B n=5 Tax=Entero... 305 3e-81 UniRef50_C7G6N5 DNA integration/recombination protein n=2 Tax=Cl... 305 3e-81 UniRef50_B6FLN0 Putative uncharacterized protein n=1 Tax=Clostri... 304 4e-81 UniRef50_D0LQK1 Resolvase domain protein n=12 Tax=Haliangium och... 304 5e-81 UniRef50_D1NLU0 Resolvase domain protein n=3 Tax=Clostridiales R... 304 8e-81 UniRef50_B5EDN9 Recombinase n=1 Tax=Geobacter bemidjiensis Bem R... 303 1e-80 UniRef50_UPI0001C37E79 resolvase, n-terminal:recombinase, putati... 303 1e-80 UniRef50_D2KRD2 Putative integrase n=1 Tax=Lactobacillus phage p... 303 1e-80 UniRef50_C0EU70 Putative uncharacterized protein n=1 Tax=Eubacte... 302 2e-80 UniRef50_B3Z2D3 Cassette chromosome recombinase B n=2 Tax=Bacill... 302 2e-80 UniRef50_C6GWI0 Site-specific recombinase n=1 Tax=Streptococcus ... 302 2e-80 UniRef50_A6NVA4 Putative uncharacterized protein n=1 Tax=Bactero... 302 2e-80 UniRef50_B0SYD9 Resolvase domain n=2 Tax=Alphaproteobacteria Rep... 301 3e-80 UniRef50_C6CZ73 Resolvase domain protein n=7 Tax=Bacillales RepI... 301 4e-80 UniRef50_Q3DFF9 Site-specific recombinase, resolvase family, put... 301 4e-80 UniRef50_Q1J4R7 Site-specific recombinase n=9 Tax=Bacteria RepID... 301 5e-80 UniRef50_UPI0001BC4A50 recombinase n=2 Tax=Fusobacterium RepID=U... 301 5e-80 UniRef50_Q5L1L1 Site-specific recombinase (Resolvase family) n=3... 300 6e-80 UniRef50_B0TCI6 DNA recombinase, putative n=20 Tax=Bacteria RepI... 300 6e-80 UniRef50_C6LFU1 Site-specific recombinase n=1 Tax=Bryantella for... 300 6e-80 UniRef50_Q2BR60 Putative uncharacterized protein n=1 Tax=Neptuni... 300 6e-80 UniRef50_A4BP41 DNA invertase n=12 Tax=Bacteria RepID=A4BP41_9GAMM 300 7e-80 UniRef50_A9WCX4 Resolvase domain n=2 Tax=Chloroflexus RepID=A9WC... 300 8e-80 UniRef50_A5TXM5 Possible recombinase n=3 Tax=Fusobacterium RepID... 300 1e-79 UniRef50_UPI0001C3223C Resolvase domain protein n=1 Tax=Conexiba... 300 1e-79 UniRef50_C9YMD9 Site-specific recombinase, resolvase family, put... 300 1e-79 UniRef50_C7H8C4 TnpX site-specific recombinase n=1 Tax=Faecaliba... 300 1e-79 UniRef50_UPI0001C374DA Recombinase n=2 Tax=Ruminococcus flavefac... 300 1e-79 UniRef50_UPI000169299B site-specific recombinase for integration... 300 1e-79 UniRef50_A8SHS8 Putative uncharacterized protein n=1 Tax=Faecali... 300 1e-79 UniRef50_C7H8M7 Site-specific recombinase, resolvase family n=3 ... 299 2e-79 UniRef50_A0Q362 Site-specific recombinase, resolvase family, put... 299 2e-79 UniRef50_B4BQU1 Resolvase domain protein n=1 Tax=Geobacillus sp.... 299 2e-79 UniRef50_Q72WY0 DNA recombinase, putative n=7 Tax=Bacillus cereu... 299 2e-79 UniRef50_C8VVS5 Resolvase domain protein n=19 Tax=Firmicutes Rep... 299 2e-79 UniRef50_A7VRL7 Putative uncharacterized protein n=9 Tax=Clostri... 299 2e-79 UniRef50_C7GC56 Site-specific recombinase, resolvase family n=7 ... 299 3e-79 UniRef50_UPI0001C3729E phage integrase family site specific reco... 298 3e-79 UniRef50_B0MRT0 Putative uncharacterized protein n=1 Tax=Eubacte... 298 3e-79 UniRef50_B0P5W1 Putative uncharacterized protein n=1 Tax=Anaerot... 298 3e-79 UniRef50_D1N7I8 Resolvase domain protein n=1 Tax=Victivallis vad... 298 3e-79 UniRef50_C8VVS3 Resolvase domain protein n=1 Tax=Desulfotomaculu... 297 5e-79 UniRef50_C6GWI2 Site-specific recombinase n=1 Tax=Streptococcus ... 297 5e-79 UniRef50_A8W2T2 Site-specific recombinase DNA invertase Pin-like... 297 5e-79 UniRef50_D1C6M6 Resolvase domain protein n=1 Tax=Sphaerobacter t... 297 7e-79 UniRef50_C7GD97 Site-specific recombinase, resolvase family n=3 ... 297 7e-79 UniRef50_UPI0001C361A0 site-specific recombinase n=1 Tax=Clostri... 297 8e-79 UniRef50_A6LK15 Resolvase, N-terminal domain n=1 Tax=Thermosipho... 297 9e-79 UniRef50_B8I7G9 Resolvase domain protein n=2 Tax=Clostridium Rep... 296 1e-78 UniRef50_UPI0001BCECF1 putative integrase n=1 Tax=Selenomonas no... 295 2e-78 UniRef50_C4ZAA9 Cassette chromosome recombinase B n=1 Tax=Eubact... 295 2e-78 UniRef50_A9W3Z8 Recombinase n=1 Tax=Methylobacterium extorquens ... 295 2e-78 UniRef50_Q11G64 Recombinase n=2 Tax=Rhizobiales RepID=Q11G64_MESSB 295 2e-78 UniRef50_C9L5M4 Site-specific recombinase, resolvase family n=2 ... 295 2e-78 UniRef50_B8I5Z3 Resolvase domain protein n=1 Tax=Clostridium cel... 294 4e-78 UniRef50_C7H1C6 TnpX site-specific recombinase n=10 Tax=Bacteria... 293 7e-78 UniRef50_C7HT51 TnpX site-specific recombinase n=2 Tax=Clostridi... 293 7e-78 UniRef50_C8SMT4 Recombinase n=1 Tax=Mesorhizobium opportunistum ... 293 8e-78 UniRef50_A3VUU7 Putative uncharacterized protein n=1 Tax=Parvula... 293 9e-78 UniRef50_D1C6R3 Resolvase domain protein n=1 Tax=Sphaerobacter t... 293 1e-77 UniRef50_A3DG43 Recombinase n=6 Tax=root RepID=A3DG43_CLOTH 293 1e-77 UniRef50_UPI000197392E cassette chromosome recombinase B n=1 Tax... 292 2e-77 UniRef50_A5MYI4 Phage invertase/recombinase-related protein n=6 ... 292 2e-77 UniRef50_B1C3Z4 Putative uncharacterized protein n=1 Tax=Clostri... 292 2e-77 UniRef50_D2MPD5 TnpX site-specific recombinase family protein n=... 292 2e-77 UniRef50_UPI0001C37E7C hypothetical protein RflaF_15886 n=1 Tax=... 292 2e-77 UniRef50_B8FU52 Resolvase domain protein n=2 Tax=Clostridiales R... 291 3e-77 UniRef50_Q2RI69 Resolvase-like n=1 Tax=Moorella thermoacetica AT... 291 3e-77 UniRef50_Q1QGT0 Recombinase n=2 Tax=Bradyrhizobiaceae RepID=Q1QG... 291 4e-77 UniRef50_C6JA26 Putative uncharacterized protein n=1 Tax=Ruminoc... 291 4e-77 UniRef50_Q892F0 DNA integration/recombination protein n=1 Tax=Cl... 291 5e-77 UniRef50_Q24RX5 Putative uncharacterized protein n=3 Tax=Clostri... 291 5e-77 UniRef50_Q041M5 Site-specific recombinase, DNA invertase Pin rel... 291 5e-77 UniRef50_UPI0001BC6B74 site-specific recombinase n=1 Tax=Vibrio ... 290 1e-76 UniRef50_A5ZA26 Putative uncharacterized protein n=2 Tax=Clostri... 290 1e-76 UniRef50_A5CZZ6 Site-specific recombinases n=1 Tax=Pelotomaculum... 290 1e-76 UniRef50_Q0T5X8 Hypothetical bacteriophage protein n=5 Tax=Enter... 290 1e-76 UniRef50_C0ZFK2 Putative integrase n=2 Tax=Brevibacillus brevis ... 289 1e-76 UniRef50_C2KNU9 Site-specific recombinase n=1 Tax=Mobiluncus mul... 289 1e-76 UniRef50_C6JFP6 Recombinase n=2 Tax=Clostridiales RepID=C6JFP6_9... 289 1e-76 UniRef50_A3DG42 Recombinase n=7 Tax=root RepID=A3DG42_CLOTH 289 2e-76 UniRef50_Q8LTD8 U153 integrase n=13 Tax=root RepID=Q8LTD8_9VIRU 289 2e-76 UniRef50_Q187L8 Site-specific recombinases n=6 Tax=Clostridium d... 289 2e-76 UniRef50_C7H9D9 TnpX site-specific recombinase n=5 Tax=Bacteria ... 289 2e-76 UniRef50_Q1DB40 Site-specific recombinase, resolvase family n=4 ... 288 2e-76 UniRef50_C5UY92 Resolvase n=1 Tax=Clostridium botulinum E1 str. ... 288 2e-76 UniRef50_A5D4E3 Site-specific recombinases n=1 Tax=Pelotomaculum... 288 3e-76 UniRef50_A6P2T0 Putative uncharacterized protein n=1 Tax=Bactero... 288 3e-76 UniRef50_C5VNM7 Site-specific recombinase, resolvase family n=1 ... 288 4e-76 UniRef50_Q0TMZ4 Site-specific recombinase, resolvase family n=2 ... 288 4e-76 UniRef50_A8RUP3 Putative uncharacterized protein n=1 Tax=Clostri... 288 4e-76 UniRef50_Q3KAI6 Putative integrase/recombinase n=1 Tax=Pseudomon... 287 5e-76 UniRef50_A5D367 Putative uncharacterized protein n=1 Tax=Pelotom... 287 5e-76 Sequences not found previously or not previously below threshold: >UniRef50_P77698 Uncharacterized protein ybcK n=22 Tax=Escherichia coli RepID=YBCK_ECOLI Length = 508 Score = 499 bits (1286), Expect = e-140, Method: Composition-based stats. Identities = 508/508 (100%), Positives = 508/508 (100%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS Sbjct: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY Sbjct: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL Sbjct: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL Sbjct: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 Query: 241 LANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLI 300 LANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLI Sbjct: 241 LANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLI 300 Query: 301 NLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINELLFN 360 NLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINELLFN Sbjct: 301 NLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINELLFN 360 Query: 361 CSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTAIAEKIRLLDKELRRASV 420 CSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTAIAEKIRLLDKELRRASV Sbjct: 361 CSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTAIAEKIRLLDKELRRASV 420 Query: 421 SLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVF 480 SLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVF Sbjct: 421 SLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVF 480 Query: 481 KHYPLMKVISAQQAISALKYMVDGEIYF 508 KHYPLMKVISAQQAISALKYMVDGEIYF Sbjct: 481 KHYPLMKVISAQQAISALKYMVDGEIYF 508 >UniRef50_B3WZ52 Hypothetical bacteriophage protein n=1 Tax=Shigella dysenteriae 1012 RepID=B3WZ52_SHIDY Length = 464 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 173/475 (36%), Positives = 271/475 (57%), Gaps = 16/475 (3%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDT-ITYEDLGLSAFKGKHAQ 59 M++AI+Y+RFSS Q+ GDS+ RQ +L+ +WL N ++YLD+ ++++DLG SAF GKH + Sbjct: 1 MRRAISYIRFSSERQLKGDSVRRQSKLVTDWLDKNPEFYLDSSLSFKDLGKSAFSGKHLK 60 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 G +FL AIE G + G TLL+ESLDRLSR+ + A E L+ IL G+DV+TL D Sbjct: 61 -GGLGDFLTAIEKGLVKAGDTLLIESLDRLSRQDIDIASELLRRILRAGVDVVTLSDGEH 119 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 Y +SL +P +LIK+ILI QRA+EES KS RV+ +W +K ++ + G ++ CP WL Sbjct: 120 YTRESLKDPLALIKSILIMQRAHEESLRKSERVQAAWNRK-KELISEGIKVSRRCPAWLK 178 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKN---FSGKESAWGPSV 236 L+D R F PD+V+ ++ F LR++ S AI + LND + ++ K+ W + Sbjct: 179 LNDDRRTFTIIPDKVEVVKRAFDLRLQGLSFWAITRTLNDEGHLSLNQYTPKQKGWSDTA 238 Query: 237 IEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKN 296 ++KLL N+A+IG P+ R E+ GYYP +IS+ LFY VQ++ +G ++ S N Sbjct: 239 VKKLLRNRAVIGCFTPAGR------EEVQGYYPAIISESLFYRVQQLNTGQYGRASVSSN 292 Query: 297 PMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINE 356 P+ +NL R ++KC CG T+++ + G Y CP R +RC +I R D I+ Sbjct: 293 PLSVNLFRGIIKCSECGATIVLGGYALKRFGMYRCPNRSANRCSAKAISRKQTDATILYM 352 Query: 357 LLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTAIAEKIRLLDKELR 416 L D ++L+L+ +LQ KI+ + ++T I EK+R + L Sbjct: 353 LALCDR---FETENTDTIDSLKLQREDLQRKISKMAELAIELDDMTIITEKLRDMKNALS 409 Query: 417 RASVSLKTL-KSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTC 470 + + ++ K + ID T+K G + L ++I+I+ + C Sbjct: 410 KLNHDIEEETKRIKAITTGSLKDIDRTTKEGMVETQLLIKGVLKEIVIDAAKRRC 464 >UniRef50_B0K4R6 Recombinase n=9 Tax=Clostridia RepID=B0K4R6_THEPX Length = 506 Score = 363 bits (933), Expect = 8e-99, Method: Composition-based stats. Identities = 102/512 (19%), Positives = 198/512 (38%), Gaps = 57/512 (11%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 +A AY R+SS Q +S+ Q R I E+ + N+ Y D SA A Sbjct: 7 RAAAYARYSSDNQRE-ESIEAQLRAIKEYCEKNN--IQLVKIYTDEAKSATTD---DRPA 60 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F + + G ++V LDR +R + A + + +G+ +I++ + Sbjct: 61 FLQMIKDSSLGL---FNAVIVHKLDRFARNRYDSAFY-RRQLKKNGVKLISVLEQLD--- 113 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 + P S+I ++ A S+ + V K+ A +G P + D Sbjct: 114 ---DSPESIILESVLEGMAEYYSKNLAREVMKGLKENAFQAKFNG----GIPPLGYDIVD 166 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 ++ +V + + + LIF+L + I LN + G + + + I ++L Sbjct: 167 EK--YVINEKEAEAVRLIFELYAQGYGYRHIIDELNLRGYRTKKG--NPFSKNSIHEILK 222 Query: 243 NKALIGICVPSYRARGK------GISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKN 296 N+ IG + + + + I P +I DLF VQ+ I+ + + Sbjct: 223 NEKYIGKYIFNKGTKKNHRMVKEDVIVIDNAIPAIIDKDLFEQVQKKIEER-KITRGANS 281 Query: 297 PMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMR-RLHRCDRPSIKRDLVDYNIIN 355 + LL ++ C C + M+ G + Y C + R +C I ++ ++ +I+ Sbjct: 282 AKRVYLLSGLVYCGICDSKMVGCLSRGK-YVTYRCSRKDRTKQCTNRDINKEKLEAFVID 340 Query: 356 EL---------------LFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPE 400 EL L N + + + + L+ + E++ ++ N++ A++ Sbjct: 341 ELNKRVLDPKVAPVLAKLLNEENQKLNKERVEEITLLKKRYKEVEEQMKNIVEAIAQGMF 400 Query: 401 VTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRE---------LCR 451 + EK+ L+ + +K L++K SF I + RE + Sbjct: 401 QPIMKEKMNELEAMRNELAYRIKELENKKETSFITPEMILKIFEKDREIINSSKDPHEIK 460 Query: 452 TLAYKTFEKIIINTDNKTCDIYFMNGIVFKHY 483 + +KII+ D C+ YF G F+ Sbjct: 461 EVLKNYIKKIIVTPDEIKCEFYFWIGDDFRSL 492 >UniRef50_C6URU6 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=C6URU6_ECO5T Length = 375 Score = 362 bits (929), Expect = 2e-98, Method: Composition-based stats. Identities = 357/358 (99%), Positives = 357/358 (99%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS Sbjct: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY Sbjct: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL Sbjct: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL Sbjct: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 Query: 241 LANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLI 300 LANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLI Sbjct: 241 LANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLI 300 Query: 301 NLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINELL 358 NLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINE L Sbjct: 301 NLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINEFL 358 >UniRef50_C7WYU0 Site-specific recombinase n=2 Tax=Enterococcus faecalis RepID=C7WYU0_ENTFA Length = 537 Score = 354 bits (910), Expect = 3e-96, Method: Composition-based stats. Identities = 89/546 (16%), Positives = 175/546 (32%), Gaps = 93/546 (17%) Query: 3 KAIAYMRFSSPGQM--SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 +A Y R SS S+ QR L+AE+++ + TY D G F G + Sbjct: 8 RAAIYCRLSSEDGADHESMSIGNQRALLAEYVQKQG--WEIVDTYIDDG---FSGTNFDR 62 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 F + IE G I ++ + L RL R + + I L D Sbjct: 63 PGFQRMIADIEKGRI---NLVITKDLSRLGRNYIMCGQYTEIYFPERHVRYIALNDGVDT 119 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWL-S 179 + + + K IL A + S+++K + K + G + A P Sbjct: 120 LNQTSSMDITPFKHILNDMYA----KDISTKIKSTLHTKAKR----GEYLGALDPYGYLR 171 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFS------------- 226 D + + + + + +F++ +IA LN + + + Sbjct: 172 HPDDKHKLIINEETAPVVRRMFEMCAAGIGSKSIATTLNREGILSPTEYTRFRKHNPERD 231 Query: 227 ---GKESAWGPSVIEKLLANKALIGICVPSYRAR------------GKGISEIAGYYPRV 271 + S W + ++ +L N+ +G V + K + + + Sbjct: 232 GEFERRSFWTRTYVQFMLKNEIYVGSMVQGRQYTPSYRSKKREPIPKKDWIVVPNMHEPI 291 Query: 272 ISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVC 331 +S +LF Q+ A + P L + CEACG +M+ VS + YY C Sbjct: 292 VSRELFDEAQKRMGARKKTIKAKDEPD---LFAGLFFCEACGTSMVP-KVSQQKYFYYTC 347 Query: 332 PMRRLHR---CDRPSIKRDLVDYNIINELLFN--------------------CSKIQPVE 368 C I RD ++ ++ N + + Sbjct: 348 GRSHAIGNLACSAHYINRDTFHQAVLEDIRRNARLFSEDTEKAAQKLMELKCADQQKQTA 407 Query: 369 NKKDANETLELKIIELQMKINNLIVALSVA--------PEVTAIAEKIRLLDKELRRASV 420 K + + ++ +L +K+ + + L ++ Sbjct: 408 AMKRDLASAKKRLADLDVKLKRTYEDNMSGKLPDHIFAMFIADYDTERETLKAKVAELEK 467 Query: 421 SLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTD----------NKTC 470 +L+ ++ + F A+ + +L R + ++ ++I I K Sbjct: 468 ALEKVRDAKAD-IDRFAALIQKYTSFEKLDRFMLHELIDRITIYETPGMGRCRKGKEKRI 526 Query: 471 DIYFMN 476 IY+ Sbjct: 527 TIYYKF 532 >UniRef50_C2F160 Recombinase n=2 Tax=Lactobacillus reuteri RepID=C2F160_LACRE Length = 517 Score = 353 bits (907), Expect = 9e-96, Method: Composition-based stats. Identities = 88/513 (17%), Positives = 173/513 (33%), Gaps = 57/513 (11%) Query: 4 AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAF 63 AY R S+ DSL Q+ +++ ++ L Y D G+S K ++ Sbjct: 20 VAAYCRVSTNSDEQEDSLANQQDHFKSYIQQQPNWLLH-KIYYDNGISGTKAQN--RPGL 76 Query: 64 SEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNID 123 L ++G + +L +S+ R SR + + ++ + I VI +N Sbjct: 77 QALLKDCQNGQV---DLVLTKSISRFSRNT-TDCLRIIRQLKQLDIPVIFEKENINT--- 129 Query: 124 SLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDK 183 + S + ++ A +ES+ + V+L ++++ +G + P D Sbjct: 130 --DSMDSELILSVLGSLAQDESQSIAHNVRLGYQQRA----SNGVFHYSLPPYGYQKDAN 183 Query: 184 RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLAN 243 R + DP K + IF +E +S IA+ LN+ A+ W S I +L N Sbjct: 184 R-DLIIDPIERKVVLRIFNWTIEGKSPGQIAQTLNEQAISTKR--NGKWHDSTIRGILQN 240 Query: 244 KALIGICVPSYR-----------ARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISN 292 +G +G I ++P +I F VQ+I + Sbjct: 241 TVYLGTTEFQKTFTDDEYHRHPNQGEQGKIIIEEHHPAIIDQATFTQVQKIIMLKRKFYP 300 Query: 293 SSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRL--HRCDRPSIKRDLVD 350 +K + + C C + SG + + C C SI+ D + Sbjct: 301 QAKAKPQRHTFSRKIYCGNCQKLFKRQSRSGKVC--WGCQTHIKSAKDCPVKSIREDALH 358 Query: 351 --------------YNIINELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVA-L 395 ++ L+ + + + +E ++ E + K +NL Sbjct: 359 LAFCTMVNKLIFSQKFLLEPLVEQL-QADQNQEQAAKLSQVETELKEAKDKQDNLQQLRK 417 Query: 396 SVAPEVTAIAEKIRLLDKELRRASVSLKTLKS------KGVNSFSDFYAIDLTSKNGREL 449 E ++ L++E+ ++ LK + + + S Sbjct: 418 QELIEKDFFTKQDAELEQEIANLQSEIERLKQLLGDQNSKLPLTHELLKLCQRSNYLTAF 477 Query: 450 CRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKH 482 L + E I ++ D + G+ Sbjct: 478 NAELFEQIIESITVDQD-HNLTFHLKCGLNLTE 509 >UniRef50_A7VSK4 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VSK4_9CLOT Length = 490 Score = 353 bits (906), Expect = 9e-96, Method: Composition-based stats. Identities = 90/513 (17%), Positives = 171/513 (33%), Gaps = 60/513 (11%) Query: 1 MKKAIAYMRFSSPGQM---SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKH 57 M+ A Y+R S S++ QR + ++ + N + Y D G + G + Sbjct: 2 MEPAALYLRLSQEDGERWGESQSISNQRIFLTQYCQANG--FTVAECYIDDG---YTGTN 56 Query: 58 AQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDN 117 F L IE G I T++ + L RL R+ + GI I + D Sbjct: 57 FNRPGFQRLLRDIERGKIK---TVITKDLSRLGRDYIETGRYVECYFPEKGIRYIAVNDG 113 Query: 118 TVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRW 177 + + A + + S +V+ + KR+ G + A P Sbjct: 114 VDTGKEESAGND---MSAFKAVFNDFYARDVSRKVRSALTAKRRA----GEFIGAWAPYG 166 Query: 178 LSLDDKR-TAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKE------- 229 D K+ VPDP+ + I++ ++ S+ IA+ L + + K Sbjct: 167 YQKDPKQPGKLVPDPESAGVVRRIYRDFLKGESVRGIAEGLTEDKIPTPMEKRSGGLKAQ 226 Query: 230 SAWGPSVIEKLLANKALIGICVPSYRAR------------GKGISEIAGYYPRVISDDLF 277 W S I ++L + G + K ++ + +I+ + F Sbjct: 227 RRWNESTIRRILTCETYAGNLTQNQSKTISYKVKKRIPVPKKEWIVVSNTHEPLITKEEF 286 Query: 278 YAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRL- 336 Q++ S + P +LL ++ C CG+ M V Y VC R Sbjct: 287 QMAQQLFKTRS----SPREPKDRHLLSGLVFCGDCGSPMTF--VKDGPRTYLVCSSSRRY 340 Query: 337 -HRCDRPSIKRDLVDYNIINELLFNCSKIQPV----ENKKDANETLELKIIELQMKINNL 391 C ++ D V+ +++ L IQP E + + E ++ + ++ Sbjct: 341 PGSCKTHCVREDEVERTLLDSLRKLSEGIQPQSLYPEFPRKSRELAARELRSAKEQLEFY 400 Query: 392 IVALSVAPEVTAIAEKIRLL----DKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGR 447 A + I + +++ L + + + Sbjct: 401 RRAGRDSENFPNIQRQFLSYCELWQRKVDALEEELTAEDPQDRREMAARELLRFERPG-- 458 Query: 448 ELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVF 480 RT +KI++ D K+ ++YF Sbjct: 459 ---RTTIQALVKKIVVCGD-KSLELYFSFPDPR 487 >UniRef50_B8DJ05 Recombinase n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DJ05_DESVM Length = 590 Score = 352 bits (903), Expect = 2e-95, Method: Composition-based stats. Identities = 149/549 (27%), Positives = 240/549 (43%), Gaps = 54/549 (9%) Query: 5 IAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFS 64 +Y+RFSSP QM GDS RQ + + T++D G+SAFKGKH + GA Sbjct: 15 YSYIRFSSPEQMKGDSYRRQYEASQNYALEQGLDLDEEFTFKDEGVSAFKGKHTREGALG 74 Query: 65 EFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDS 124 +F++A++ G I PG+ L++E+LDRLSRE A L IL+ GI V+ L D+ +Y +S Sbjct: 75 KFIEAVDQGAIRPGSYLIIENLDRLSREDPHTAYRLLSGILSRGITVVALQDHQIYTPES 134 Query: 125 -LNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDK 183 N+ L+ ++L RA++ES +KS+R+ +W KR+DA G MT++CP+WL LD Sbjct: 135 YANDFTQLLVSLLTMHRAHQESVVKSNRLSKAWAHKREDARTQGKAMTSTCPQWLKLDKT 194 Query: 184 RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLAN 243 + DR + + IFK ++ + +A N + F G+ W S I+K+L N Sbjct: 195 TGRYTVLEDRAEVVRRIFKETLDGKGATMLASQFNVEGIPTF-GRAKGWWNSYIKKILTN 253 Query: 244 KALIGICVPS--YRARGKGI---SEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPM 298 +A+ G P + GK + + GYYP ++ + FY Q +RL I Sbjct: 254 EAVFGRLQPHTLKQVEGKRVPVGEPVDGYYPAIVDRETFYLAQAMRLGR-RIPGGRIVAR 312 Query: 299 LINLLRTVMKCEACGNTMIVHAVSGSLHG--YYVCP--MRRLHRCDRPSIKRDLVDYNII 354 NL ++KC CG TM G Y VC R++ C R + + +I+ Sbjct: 313 FSNLFTGLVKCGVCGATMAFDNKGTGRKGGTYLVCSEAKRKVGACQRHAWRYPQTQAHIL 372 Query: 355 --------NELLFNCSK--IQPVENKKDANETLELKIIELQMKINNLIVALSVAPE---- 400 LL + ++ + + E L + + K++N L P Sbjct: 373 LNLHRLDYRNLLPDIARQALDDANQLEQQLEALLAEHADTTTKVDNATDLLITNPNNLGL 432 Query: 401 ---VTAIAEKIRLLDKELRRASVSLKTLKSKGVNSF---------------SDFYAIDLT 442 T + K R L+ + A L+T + + + ++ Sbjct: 433 LRAQTRLETKQRELETRIAAAKNQLETARRRSQEAELVAGESDDAFKAFIKAEHEGEPEK 492 Query: 443 SKNGRELCRTLAYKTFEKIIINTDNK-------TCDIYFMNGIVFKHYPLMKVISAQQAI 495 R L + E+I + +K DI F + + K Q+A Sbjct: 493 VYEMRRKMHQLLLRQLERITFHPASKPDSPFHGIIDITFKGTARLQRIKVEK---GQRAS 549 Query: 496 SALKYMVDG 504 + + DG Sbjct: 550 TGYRVNEDG 558 >UniRef50_A6NTU2 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NTU2_9BACE Length = 509 Score = 350 bits (898), Expect = 8e-95, Method: Composition-based stats. Identities = 83/522 (15%), Positives = 179/522 (34%), Gaps = 68/522 (13%) Query: 4 AIAYMRFSSPG--QMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 Y+R S + DS+ QR+L+ +++ V+ + L Y+D G + G + Sbjct: 6 TAGYLRLSREDGDKAESDSIANQRKLLEQYITVHPELRL-ADFYQDDG---YTGTNFDRP 61 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 AF + I+ G + +LV+ L R R+ + + G+ I + D+ Sbjct: 62 AFRRMEEDIKQGRV---NCVLVKDLSRFGRDYIEVGRYLEREFPARGVRFIAINDHVDSA 118 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 + + + + + S +V+ + K++ G + A D Sbjct: 119 RGRYD-----MLLPMKNIFNTQYARDISDKVRSAIHTKQER----GEFVGAFASYGYRKD 169 Query: 182 DKRT-AFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSG------------- 227 + + DP + + IF L E IAK LN + + S Sbjct: 170 PENHNHLLIDPPAAQVVRRIFNLFEEGCGKVRIAKTLNQERIPSPSEYKRILGERYHNGR 229 Query: 228 ---KESAWGPSVIEKLLANKALIGICVPS-----------YRARGKGISEIAGYYPRVIS 273 K + W + I ++L N+ G + + + + + +IS Sbjct: 230 RMDKTTYWTYATIHRILQNQMYAGNMEQGRNLRATMHGRAKQKAREDWTVVPDTHEAIIS 289 Query: 274 DDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPM 333 + + VQ + + ++N + ++C CG M+ +G YY C Sbjct: 290 PEQWERVQALLGRRTRELSFAQN---QSPFAGFLRCGDCGRAMVKTRSAGG--IYYSCGS 344 Query: 334 RRLHR---CDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETL-----ELKIIELQ 385 + + C + SI + L++ ++ +L + ++ +E D + + + L+ Sbjct: 345 YKRYGPTVCSKHSISQSLLEEVVLEDLNRVLAAVEDLEKLADETDAQTMLSPKHERGRLE 404 Query: 386 MKINNLIVAL--------SVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFY 437 + L +++ R + L+ L G +S + Sbjct: 405 EGVERLYRLKKAAYEDFREGLISRKDFLRYREDYERQERELNAQLEQLSGGGEDSGRHPW 464 Query: 438 -AIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGI 478 L L R ++ ++I++ D + Y + Sbjct: 465 VEALLRQGRLTALDRVTVAESVKQILVFEDGRIDITYTFSDT 506 >UniRef50_A6P1I2 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P1I2_9BACE Length = 548 Score = 349 bits (897), Expect = 1e-94, Method: Composition-based stats. Identities = 91/545 (16%), Positives = 178/545 (32%), Gaps = 81/545 (14%) Query: 4 AIAYMRFSSPGQMSG--DSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 A Y+R S + G S+ Q L+ E+++ + TY D G S + Sbjct: 13 AALYIRLSKEDESEGPSQSVQNQESLLREFVQEH--RLTVFDTYVDDGWSGT---NFDRP 67 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 +F + IE + ++ + L RL R+ + + H + I+L D Sbjct: 68 SFQRMIADIEAKKV---NMVITKDLSRLGRDYIMTGHYMERYFPEHRVRYISLLDGIDTG 124 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL- 180 +DS + +AI+ A + S ++K + K++ G + + Sbjct: 125 VDSTANDITPFRAIMNDMYA----KDISKKIKSVKRDKQRK----GEFIGGKPVYGYKMH 176 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKES---------- 230 ++ V D + + IF L + S IA LN + + + Sbjct: 177 PTEKNKIVIDEEVAPIVRRIFALALGGMSCRNIAVLLNREGIPTPATYANLPVAKPGPYT 236 Query: 231 -AWGPSVIEKLLANKALIGICVPSYRARGK------------GISEIAGYYPRVISDDLF 277 W I ++L N+ IG V + + G + ++ + F Sbjct: 237 GLWSSERISEMLQNETYIGNMVQGRSVKISYKSKKCLKQDPANWVVVEGTHEPLVDAESF 296 Query: 278 YAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTM---IVHAVSGSLHGYYVCPMR 334 V+ + + +++ LL+ ++ C CG + G Y+VC Sbjct: 297 RRVRMLLNSRK----HTRSRTYDFLLKGLIFCHECGYPLAVINRKNTRGEDVLYFVCRTY 352 Query: 335 ----RLHRCDRPSIKRDLVDYNIINELLFNCS----------KIQPVENKKDANETLELK 380 + C SIK V +I + C + + +LE + Sbjct: 353 QRFTKAGVCTCHSIKEKTVTDAVIARVQEVCRGFLNPEELLPMAREAVEEARKQNSLEAE 412 Query: 381 IIELQMKINNLIVALSV-----------APEVTAIAEKIRLLDKELRRASVSLKTLKSKG 429 + LQ +I+ L ++ + + +++L K L ++ K Sbjct: 413 LQALQSRIDGLTASMDRVYADRLSGLLPEEDFQRLFNRLKLDRKLLEERRQEMELQKKSP 472 Query: 430 VNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKHYPLMKVI 489 V + R L E++ + D + I F+ L +V Sbjct: 473 VTVDDRARELVERFIQTAGESRELLVSLIERVELTEDKEII-------IKFRFAQLDEVA 525 Query: 490 SAQQA 494 +QQ Sbjct: 526 QSQQP 530 >UniRef50_C0ZHM9 Putative DNA recombinase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZHM9_BREBN Length = 482 Score = 347 bits (891), Expect = 6e-94, Method: Composition-based stats. Identities = 100/489 (20%), Positives = 183/489 (37%), Gaps = 50/489 (10%) Query: 3 KAIAYMRFSSPGQM-SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 + Y+R S+ Q G S+ QR + ++ + Y D G+SA K + Sbjct: 2 RTAIYIRVSTEDQAREGFSIPAQREKLLSYVHSQG--WEVQAVYADEGVSA---KDTKRP 56 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 A S+ L I G I +LV LDRL+R V + + L+ H + + + Sbjct: 57 ALSQLLQDIRTGEI---DVVLVYRLDRLTRS-VLDLYQLLQEFDRHAVHFKSCTE----V 108 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 D+ L L+A A E E + RVKL + ++ G P +L Sbjct: 109 YDTTTAIGRLFIT-LVAALAQWERENLAERVKLGMSQMARERKRPG----GPAPFGYNLV 163 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 + V + + +F+ S IA++ N ++ +G ++W S + +LL Sbjct: 164 --QGTLVVNQREASGVRSMFERYDRGESPRQIAEWANHSGLRGKNG--ASWSASAVLRLL 219 Query: 242 ANKALIGICVPSY------RARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSK 295 N G +Y R + +P +I F VQ+ A ++ + Sbjct: 220 KNPVYHGALRWNYTDADQQRNDPEEWIIEEATHPAIIDQACFSRVQKRMSAR--GTSHPR 277 Query: 296 NPMLINLLRTVMKCEACGNTMIVHAV-------SGSLHGYYVCPMRRLHRCDRPSIKRDL 348 L ++ C CG++M H YY+C + CD P+I+ D Sbjct: 278 VLSSRYLFSGLLYCSRCGSSMRGKTTTITGKGEKRYTHRYYLCKNKLAGTCDAPAIREDR 337 Query: 349 VDYNIINELLFN----CSKIQPVENKKDANETLELKI--IELQMKINNLIVALSVA-PEV 401 ++ ++ EL+ + + +Q V + + K ELQ++ A + Sbjct: 338 LEKAMVQELMQHSPESIAALQEVVQTLFQSNSCSAKETGQELQLRKQRWEQAYEEGFLSL 397 Query: 402 TAIAEKIRLLD---KELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTF 458 + EKI L+ KE R ++ ++ S++ I S + R L Sbjct: 398 ADLREKINTLERAAKERERTYSVFSSVDQFDPDALSNWNLI--WSYANEKERRLLVCMLI 455 Query: 459 EKIIINTDN 467 +++ + + Sbjct: 456 QRVEVEATD 464 >UniRef50_C4ZE41 Site-specific recombinase n=17 Tax=Bacteria RepID=C4ZE41_EUBR3 Length = 536 Score = 346 bits (889), Expect = 1e-93, Method: Composition-based stats. Identities = 92/544 (16%), Positives = 171/544 (31%), Gaps = 93/544 (17%) Query: 2 KKAIAYMRFSSPG--QMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 Y R S Q +S++ Q+R++ + K N + + Y D G + G + Q Sbjct: 9 PITALYPRLSHEDELQGESNSISNQKRILETYAKQNG--FSNLRWYTDDG---YSGANFQ 63 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 F L IE G + T++V+ + RL R + + + G+ I + D Sbjct: 64 RPGFQAMLADIEAGKVG---TVIVKDMSRLGRNYLQVGMYTEMIFPQKGVRFIAINDGVD 120 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 + ++ ++ I S ++K + K SG +T+ Sbjct: 121 SAQG--DNDFAPLRNIFNEWL----VRDTSKKIKAVKRSK----GMSGKPITSKPVYGYL 170 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNF-------------- 225 +D+ F+ D + ++ I+ L + IA+ L + + Sbjct: 171 MDEDEN-FIIDEEAAPVVKQIYNLCLAGNGPTKIARMLTEQQIPTPGTLEYRRTGSTRRY 229 Query: 226 -SGKESAWGPSVIEKLLANKALIGICVPSYRAR------------GKGISEIAGYYPRVI 272 G E W + + +L N+ G V + + ++ +I Sbjct: 230 HPGYECKWATNTVVHILENREYTGCLVNFKTEKLSYKVKHSVENPPEKQVIFENHHEPII 289 Query: 273 SDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHA--VSGSLHGYYV 330 + VQE+R + + L ++ C CG+ M Y+ Sbjct: 290 DTQTWERVQELRKQRKRPNR----YDEVGLFSGILFCADCGSVMYQQRYQTDKRKQDCYI 345 Query: 331 CPMRRL--HRCDRPSIKRDLVDYNIINELLFNCSKIQPVE-------------------- 368 C + H C I+ DL+ +++ L S E Sbjct: 346 CGSYKKRTHDCTAHFIRTDLLTAGVLSNLRKVTSYAAKHEARFMKLLIEQNEDGGKRRNA 405 Query: 369 NKKDANETLELKIIELQMKINNLIVALSVAPEVTA--------IAEKIRLLDKELRRASV 420 KK E E +I EL L + R L + Sbjct: 406 AKKKELEAAEKRIAELSAIFKRLYEDSVTGRISDERFTELSADYEAEQRELKERAAAIQA 465 Query: 421 SLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINT--------DNKTCDI 472 L + VN+ F + + EL TL + EKI+++ + +I Sbjct: 466 ELSKAQEATVNAEK-FMNVVRRHTSFEELTPTLLREFVEKIVVHECSYDENKTRRQDIEI 524 Query: 473 YFMN 476 Y+ Sbjct: 525 YYSF 528 >UniRef50_Q30XM6 Putative uncharacterized protein n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30XM6_DESDG Length = 644 Score = 346 bits (888), Expect = 1e-93, Method: Composition-based stats. Identities = 136/477 (28%), Positives = 213/477 (44%), Gaps = 25/477 (5%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 KA +Y+RFS+P QM GDS RQ L + + N DT+T++DLG+SAF+GK+A+ G Sbjct: 49 PKAYSYLRFSTPDQMKGDSFRRQTELSRMYAEENGLDLDDTLTFQDLGVSAFRGKNAEEG 108 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F++A++ G + G+ LLVESLDRLSR+ +A + ILN G+ ++TL D VY+ Sbjct: 109 ELGAFIEAVDQGKVKRGSFLLVESLDRLSRQSPYKAFLQFSNILNRGLSIVTLQDGKVYS 168 Query: 122 IDSLNEP---YSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWL 178 S L+ +I + QRA EES KS R+ WK KR+ A + +T+ CP WL Sbjct: 169 AGSNGNDLAFSDLMVSIAVMQRAYEESLTKSRRLSEVWKAKRRKAADGSLKLTSRCPEWL 228 Query: 179 SLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIE 238 LD K F +R ++ IF++ ++ IA N +K F G+ W S + Sbjct: 229 KLDKKNNTFHVIEERAAIVQRIFEMTLDGIGKRVIAATFNAEGIKPF-GRGKGWHYSYVT 287 Query: 239 KLLANKALIGIC-------VPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGIS 291 K+L N+A IG V R R I Y+P VIS++ F + +R I+ Sbjct: 288 KILENEATIGRYQPHKMQEVQGKRKRVPVGEPIENYFPAVISEETFLKAKRMRKER-KIA 346 Query: 292 NSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHG--YYVCPMRRLH-RCDRPSIKRDL 348 ++ NL + C CG M G Y VC R+ C R S + Sbjct: 347 GANVGNRYSNLFSGLAVCGVCGGVMHFENKGKPPKGGTYLVCSNARMKLGCKRYSWRYPQ 406 Query: 349 VDYNIINELLF----------NCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVA 398 +I+ L + VE +D +E ++ + K+ L L Sbjct: 407 AQAHILMNLTELNYRELFPTLYEKSRESVERLQDKLLVMEERLKATEAKLERLTNILIER 466 Query: 399 PEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAY 455 P + + ++ L++E + V ++ + + + Sbjct: 467 PHSSTLLTRLDALEEEKQGLIVGIEKAARDLSEEQERVEGAGKEYEELEDALQRYIE 523 >UniRef50_Q88NT6 Recombinase-related protein n=1 Tax=Pseudomonas putida KT2440 RepID=Q88NT6_PSEPK Length = 563 Score = 345 bits (886), Expect = 2e-93, Method: Composition-based stats. Identities = 139/498 (27%), Positives = 221/498 (44%), Gaps = 30/498 (6%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYE--DLGLSAFKGKHA 58 M K +Y+RFSS Q +GDS RQ + + N D Y D G SAFKGKH Sbjct: 1 MSKVFSYIRFSSAKQSAGDSYARQVKAAKAFCDENGLEMADPREYLFFDKGRSAFKGKHL 60 Query: 59 Q-SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDN 117 +G + FL +E I PG+ L+VESLDRLSREKV +A+ R +L GI+V T D Sbjct: 61 DDTGELARFLSYVEDSTIPPGSYLVVESLDRLSREKVRDALPRFLDLLAKGINVYTSVDK 120 Query: 118 TVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRW 177 +Y D LI +I+ RA+EES +K RV +W++K++ A +G + P W Sbjct: 121 RLYTKDY--NELDLIISIISMSRAHEESAVKGGRVSSAWREKQKAARTTGKPLGKLRPLW 178 Query: 178 LSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGK----ESAWG 233 L + +V +PD+ + IF L + IA LN + FS WG Sbjct: 179 LDVTPDG--YVLNPDKAAVVRRIFDLSTKGHGSRIIAATLNQEGIPAFSAGRKNFSGLWG 236 Query: 234 PSVIEKLLANKALIGICVPSYRARGK---GISEIAGYYPRVISDDLFYAVQEIRLAPFGI 290 S + +L ++ +G P GK I Y+P V+++D FY Q R + Sbjct: 237 FSTVRHILDSRTTLGEYQPHIFTDGKRTPDGDPIKDYFPSVVTEDEFYLAQAARTSR-KT 295 Query: 291 SNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVD 350 + +K N+L ++ C CG+ M + G YY C CD I + Sbjct: 296 HSVTKATTNFNVLAGILNCYKCGSAMHLQGQRGRK--YYKCSKTTRGLCDAGIISAPRTE 353 Query: 351 YNIINELLFNCSKIQPVENK----KDANETLELKIIELQMKINNLIVALSV------APE 400 + E+L + V++ + + + +E +I L+ + ++ + + A Sbjct: 354 Q-VFKEILTKVDSLSLVQDSSGSLQKSLQIVEGRIASLKARQDDAEASHAEFPSRITAKL 412 Query: 401 VTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEK 460 + + I L+ E + L + K + F F +DL S GR L + Sbjct: 413 LHELEADIGALESERTAIAEQLASDKVMSKHDF--FEKLDLVSFEGRVAANNLIKRLGLF 470 Query: 461 IIINTDNKTCDIYFMNGI 478 I + + +T + Y+++ Sbjct: 471 IFASKNGRTDETYWVSKN 488 >UniRef50_C7H883 Resolvase domain protein n=4 Tax=Faecalibacterium prausnitzii RepID=C7H883_9FIRM Length = 519 Score = 345 bits (885), Expect = 3e-93, Method: Composition-based stats. Identities = 79/493 (16%), Positives = 171/493 (34%), Gaps = 51/493 (10%) Query: 4 AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAF 63 A+ Y R+SS Q S+ Q R ++ + N TY D A+ K F Sbjct: 3 AVIYARYSSDSQREA-SIEGQLRDCKDYAEKNG--ITVVGTYIDR---AYSAKTDDRPDF 56 Query: 64 SEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNID 123 + G +LV LDR +R + +A+ + +G+ +++ + Sbjct: 57 QRMIKD--SGK-KIFDVVLVWKLDRFARNRF-DAVNYKYQLEKNGVHLVSAMEPI----- 107 Query: 124 SLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDK 183 P ++ ++ A S + +V ++ +G P ++ + Sbjct: 108 -SQGPEGIMVESMLIGMAEYYSAELALKVARGERENALQCKYNG----GVVPLGFTIGKE 162 Query: 184 RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLAN 243 + DP+ ++ IF IA LN+ ++ +GK + + ++ N Sbjct: 163 DRLYHIDPETAPIVQEIFSRYANGEPAEKIAASLNERGLRTRTGKP--FVKNSFFQIFRN 220 Query: 244 KALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLL 303 + IG G P ++ DLF VQ+ + LL Sbjct: 221 RRYIGEYRYK-------DIVTPGGIPAIVDQDLFDRVQQRFEQNRIAHGRPAKEDVSYLL 273 Query: 304 RTVMKCEACGNTMIVHAVS---GSLHGYYVCPMRRLHR---CDRPSIKRDLVDYNIIN-- 355 T + C CG M + + G+ + YY C + H CD +I+++ ++ ++ Sbjct: 274 TTKLFCGKCGTLMGGESGTSHMGNTYYYYKCGKAKRHGKAHCDLKAIRKEPLERFVVETA 333 Query: 356 -------ELLFNCSKIQPVENKKDANET--LELKIIELQMKINNLIVALSVAPEVTAIAE 406 E++ + +++ L+ ++ + + ++ NL+ A+ + Sbjct: 334 IKVIFSDEIIERLIDLIMEAQQQENTRLPVLKEQLRDTEKRLANLLEAIEQGILTPTTKQ 393 Query: 407 KIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKN-----GRELCRTLAYKTFEKI 461 ++ L+ + + S+ + K ++ L E R + + Sbjct: 394 RLDELEAQKEALNTSILEEELKKPVLTREWIRFWLEKFRKGDVGSTEHQRQIIDTFVNSV 453 Query: 462 IINTDNKTCDIYF 474 + D + F Sbjct: 454 YVFDDRVVLNFNF 466 >UniRef50_Q2JCD2 Resolvase-like n=3 Tax=Actinomycetales RepID=Q2JCD2_FRASC Length = 665 Score = 344 bits (882), Expect = 6e-93, Method: Composition-based stats. Identities = 85/494 (17%), Positives = 161/494 (32%), Gaps = 60/494 (12%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 + Y+R S+ + S+ Q + ++ + + + D G + Sbjct: 26 RVGIYLRRSTDDEHQPYSIEAQEERLRSYIDSQPGW-AIALRFSDDA----SGATTERDD 80 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 L A HG I LLV +DRLSR + + + L+ + G+ + + Sbjct: 81 LQRALSAARHGLI---DVLLVYRVDRLSRN-LRDTVTLLEELDQAGVVFRSATEPFDTAT 136 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 P + ++A A E + RV ++K G M + P +D Sbjct: 137 -----PMGRMLLQMLAMFAQFERDTIIDRVIAGMERKAAK----GLWMGGNRPFGYQVDR 187 Query: 183 KRTAFVPDPDRVKTIELIFKLRM-ERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 + D + LIF L + ER AIAK LN+ + +G W + ++L Sbjct: 188 ANWKLLVDEKEAPVVRLIFNLYVKERVGTRAIAKTLNERGHRTTTG--GPWSGHQVLRVL 245 Query: 242 ANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLIN 301 N+ +G + + +I F ++I Sbjct: 246 DNRIYLGELTF-------REITVTDTHKPIIEAAQFAEAEKILTIRSDGHTHRAASDSDY 298 Query: 302 LLRTVMKCEACGNTMIVHAVSG--SLHGYYVCPMRRLH---RCDRPSIKRDLVDYNIINE 356 L M+C C M+ G + YY C R + RCD P + D +D ++ Sbjct: 299 YLTGRMRCPQCAKAMLGSNAGGRNRTYRYYTCFTRLRYSRDRCDAPRLDADALDQAVLTA 358 Query: 357 LLFNCSKIQPV----------------ENKKDANETLELKIIELQMKINNLIVALSVAP- 399 L Q + ++ T++ + + I+ + A Sbjct: 359 LAAFYRDHQQLISDAVHHARQRHHDAHADRTGELATVQADLTQTDQAIDRYLSAFERGTL 418 Query: 400 EVTAIAEKIRLLDKELRRASVSLKTLKSKGVNS---------FSDFYAIDLTSKNGRELC 450 + +A ++ L + ++ L ++ + ID + G +L Sbjct: 419 DEETLATRLATLRTKQKQLRRRQTELTAQIDDEPVMPPRATLSKIAGHIDTIIEVGTDLQ 478 Query: 451 R-TLAYKTFEKIII 463 R L ++ I Sbjct: 479 RKALVEALIHEVKI 492 >UniRef50_UPI0001C355EF site-specific recombinase n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C355EF Length = 545 Score = 343 bits (880), Expect = 1e-92, Method: Composition-based stats. Identities = 96/531 (18%), Positives = 182/531 (34%), Gaps = 75/531 (14%) Query: 3 KAIAYMRFSSPGQM--SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 +A AY+R S DS+ QR LI +L D L +D + G Sbjct: 11 RADAYLRLSKEDGDKVESDSIANQRDLIRHFLADKPDIQLVDEQIDD----GYSGATFDR 66 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 +F + ++ ++ G I ++V+ L R R V ++ +G+ I + DN Sbjct: 67 PSFQKMMEDVKSGKI---NCIIVKDLSRFGRNFVEAGRYIDQIFPEYGVRFIAINDNFDS 123 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 L+ + + A S +V+ + KR+ G + + Sbjct: 124 AKGRSQSDNVLLPFLNLVNDA--FCRDISIKVRSQLEVKRKK----GDFVGSFAVYGYLK 177 Query: 181 DDK-RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKES--------- 230 D R + D + IFK +++ S IA LN+ + + + Sbjct: 178 DPDNRHKLIVDEFAANVVRDIFKWKIDGLSQQRIADRLNELGILSPMEYKKNCGMAYRTG 237 Query: 231 -------AWGPSVIEKLLANKALIGICVPSYRAR------------GKGISEIAGYYPRV 271 W + ++L N+ IG V R I + + Sbjct: 238 FQVSTKAKWTAVAVGRILRNEFYIGTLVQGKRTTPNHKVKKTIEKPNNEWVRIENNHEPI 297 Query: 272 ISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHA--VSGSLHGYY 329 ++ + F AV + L ++ ++L ++ C CG M+ + +G + YY Sbjct: 298 VTIEEFSAVGRLLLQDTRVAPDQNT---VSLFSGLIFCGDCGQNMVKNGVCKAGKTYSYY 354 Query: 330 -VCPMRRLHRCDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLELKIIELQM-- 386 C R C I V +++ L + S + +E + L L+ E+Q Sbjct: 355 MCCTNRAKKGCSSHRIPEQAVADSVLMSLKEHISTVLEIEKTLEFLAGLPLQRAEVQKAD 414 Query: 387 --------KINN-------LIVALSVA-PEVTAIAEKIRLLDKELRRASVS----LKTLK 426 +I L AL+ + + E + DK+++ A L+ Sbjct: 415 ARLVSKQEEIKRYEKLKATLYEALADGLIDKSEYLELKAVYDKKMQEARSEEVKVKDELE 474 Query: 427 SKGVNSFSDFYAID--LTSKNGRELCRTLAYKTFEKIIINTDNK-TCDIYF 474 S N + I+ +N L R + E+I++ D + + + Sbjct: 475 SILQNQSVNSQWIEHFRAYQNIDTLDRRMVVTLIERILVYEDYRLQIEFRY 525 >UniRef50_UPI0001973930 site-specific recombinase n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001973930 Length = 563 Score = 342 bits (877), Expect = 3e-92, Method: Composition-based stats. Identities = 96/569 (16%), Positives = 188/569 (33%), Gaps = 82/569 (14%) Query: 3 KAIAYMRFSSPGQM--------SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFK 54 KA Y+R S DS++ QR LI E+LK + + Y D G F Sbjct: 11 KAAIYLRLSKEDGDFSISGEKLESDSISNQRMLIKEYLKKHPE-ITVVKEYCDDG---FT 66 Query: 55 GKHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITL 114 G + + F+ ++A+ G + ++V+ L R RE + K+ GI I + Sbjct: 67 GANFERPDFNRMMEAVRAGLV---DCIVVKDLSRFGREYIEAGDYIQKIFPRLGIRFIAI 123 Query: 115 CDNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASC 174 DN + + + S +V+ + KR+ +G + + Sbjct: 124 NDNYDSAQ--PGAADNELVLPFKNLMNDSYCRDISIKVRSNLDAKRR----NGQFVGSRV 177 Query: 175 PRWL-SLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNF-------- 225 D + V DP ++ IFK ++E S IA LND V + Sbjct: 178 VFGYLRSPDNKNQLVIDPVAAPVVQDIFKWKIEGLSPAQIADRLNDANVPSPIEYKKANG 237 Query: 226 --------SGKESAWGPSVIEKLLANKALIGICVPSYRARGK------------GISEIA 265 + K + W I ++L N+ G V + Sbjct: 238 SKQRTCFQTKKVALWSAVAIYRILKNEIYTGTLVQGKTTSPNHKVKKTIVKPQSEWARTE 297 Query: 266 GYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVH--AVSG 323 + +I+ F VQ++ L + + ++ + C CG+ M+ Sbjct: 298 NAHEPIIAHAQFDLVQKLMLDDTRSPSGA---TGVHPFSGKIYCADCGSPMVRRVSRCGE 354 Query: 324 SLHGYYVCPMRR--LHRCDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETL---E 378 + Y++C + C SIK +V ++ + + + + + + Sbjct: 355 KEYAYFICGGNKSDKTSCSAHSIKESVVYDAVLAVVQGHIDAAMNMADALKRIDDMAWEN 414 Query: 379 LKIIELQMKIN---------------NLIVALSVAPEVTAIAEKIRLLDKELRRASVSLK 423 +I +++ KI+ S D++++ AS ++ Sbjct: 415 REIEKIKAKISFQEEIIDKNRRLKTGAYEDFKSDFISREEYKAFTAQFDQQIKEASDTIM 474 Query: 424 TLKSKG------VNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNG 477 L S+ + + N +EL R+ + I I +NK D+ M+ Sbjct: 475 RLTSERNSVMGGLAEQQSWLEQFRKYANIKELTRSTVVNLIDYIHI-RENKDIDVGLMHC 533 Query: 478 IVFKHYPLMKVISAQQAISALKYMVDGEI 506 F ++ + + ++ Sbjct: 534 DRFASIVEFLRERQEKEDANKVIRFERKV 562 >UniRef50_Q87J19 Putative site-specific recombinase n=1 Tax=Vibrio parahaemolyticus RepID=Q87J19_VIBPA Length = 575 Score = 341 bits (875), Expect = 4e-92, Method: Composition-based stats. Identities = 125/511 (24%), Positives = 236/511 (46%), Gaps = 29/511 (5%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 K A +Y R S+ Q+ G RQR I + + + L T+ DLG+SA+KG +A +G Sbjct: 3 KIAYSYTRLSTEKQIKGHGFTRQREAIEKVCCQHG-WQLSDQTFNDLGVSAWKGANATTG 61 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 A S+F+D + G I P + L+VES+DRLSR++V +++ + +L G+ + TL D+ +Y Sbjct: 62 ALSQFIDLAKKGAIRPNSVLIVESVDRLSRQQVDKSLRLMLELLEVGVSIFTLSDSKLYT 121 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 +S + L+ ++ AQRA+EESEIKS RV+ + KKK ++ + G I+T CP WL++ Sbjct: 122 TNSDSVMLDLMMWLMTAQRAHEESEIKSLRVRAA-KKKNKELIRKGIIVTRKCPEWLTVS 180 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 D ++ F+ + +R + + IF + S IA LN+ + + GK S W I LL Sbjct: 181 DDKSCFLVNNERAEIVRKIFTWYSQGFSTKPIALKLNELGIPYW-GKSSTWSYRHIRSLL 239 Query: 242 ANKALIGICVPSYRARGKGI---SEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPM 298 ++ +IG R G+ + + YYP +I L+ Q+I+ + Sbjct: 240 KHRGVIGEIQLLKRIDGRDVADGDPVEDYYPAIIDRGLWATCQQIKSSKTTAKGRVVERG 299 Query: 299 LINLLRTVMKCEACGNTMIVHAV--SGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINE 356 + NL R ++KC CG+ + +++ G + + C + C + + + ++ Sbjct: 300 MANLFRGLLKC-ECGSGLAINSSTVKGRTYRFLRCSQLKTTGCQAKNWHYEKTERILLIA 358 Query: 357 LLFNCSKIQPVENKKDANE------TLELKIIELQMKINNLIVALSVAPE------VTAI 404 L + S ++ E + ++ E + + N I L P + + Sbjct: 359 LRHSLSSFSEEDHAVSLRECQHYLARISEELKEKERQAENAINYLLDKPSKLLEARLQTL 418 Query: 405 AEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDL------TSKNGRELCRTLAYKTF 458 + I L +A L+ + + + + + R L + Sbjct: 419 EDDIARLKAIQEQAEHRLEAVHYEKSTALDKVEELQRVLEDIANDDDSRHKANGLLRRLI 478 Query: 459 EKIIIN--TDNKTCDIYFMNGIVFKHYPLMK 487 + I + ++ ++ + ++G + ++K Sbjct: 479 DTITLGSISNPRSKEFMEVSGNDYHGLIIIK 509 >UniRef50_C7H8A3 Resolvase domain protein n=22 Tax=Clostridia RepID=C7H8A3_9FIRM Length = 529 Score = 340 bits (873), Expect = 7e-92, Method: Composition-based stats. Identities = 78/493 (15%), Positives = 170/493 (34%), Gaps = 51/493 (10%) Query: 4 AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAF 63 A+ Y R+SS Q S+ Q R ++ + N TY D A+ K F Sbjct: 3 AVIYARYSSDSQREA-SIEGQLRDCKDYAEKNG--ITVVGTYIDR---AYSAKTDDRPEF 56 Query: 64 SEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNID 123 + I +LV LDR +R + +A+ + +G+ +++ + Sbjct: 57 QHMIKD-SAKKI--FDVVLVWKLDRFARNRY-DAVNYKHQLEKNGVHLVSAMEPI----- 107 Query: 124 SLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDK 183 P ++ ++ A S + +V ++ +G P ++ + Sbjct: 108 -SQGPEGIMVESMLIGMAEYYSAELALKVARGERENALQCKYNG----GVVPLGFTIGKE 162 Query: 184 RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLAN 243 + DP+ ++ IF + IA LN+ ++ +GK + + ++ N Sbjct: 163 DRLYHIDPETAPIVQEIFTRYADGEPAEKIAASLNERGLRTRTGKP--FVKNSFFQIFRN 220 Query: 244 KALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLL 303 + IG G P ++ DLF VQ+ + LL Sbjct: 221 RRYIGEYRYK-------DIVTPGGIPAIVDKDLFDRVQQRFEQNKIAHGRPAKEDVSYLL 273 Query: 304 RTVMKCEACGNTMIVHAVS---GSLHGYYVCPMRRLHR---CDRPSIKRDLVDYNIIN-- 355 T + C CG M + + G+ + YY C + H CD +I+++ ++ ++ Sbjct: 274 TTKLFCGKCGTLMGGESGTSHMGNTYYYYKCGNAKRHGKAHCDLKAIRKESLERFVVETA 333 Query: 356 -------ELLFNCSKIQPVENKKDANET--LELKIIELQMKINNLIVALSVAPEVTAIAE 406 E++ + +++ L+ ++ + + ++ NL+ A+ + Sbjct: 334 IKVIFSDEIIERLIDLIMEAQQQENTRLPVLKDQLRDTEKRLANLLEAIEQGILTPTTKQ 393 Query: 407 KIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKN-----GRELCRTLAYKTFEKI 461 ++ L+ + S+ + K ++ E R + + Sbjct: 394 RLDELEARKEALNTSILEEELKKPVLTREWMRFWFEKFRKGDVGSTEHQRQIIDTFVNSV 453 Query: 462 IINTDNKTCDIYF 474 + D + F Sbjct: 454 YVFDDRVVLNFNF 466 >UniRef50_C7GIC8 TnpX site-specific recombinase n=22 Tax=Bacteria RepID=C7GIC8_9FIRM Length = 537 Score = 340 bits (873), Expect = 8e-92, Method: Composition-based stats. Identities = 89/551 (16%), Positives = 178/551 (32%), Gaps = 85/551 (15%) Query: 4 AIAYMRFSSPG--QMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 Y R S Q +S++ Q+R++ + K N + + Y D G + G + Q Sbjct: 11 TALYPRLSHEDELQGESNSISNQKRILETYAKQNG--FTNLCWYTDDG---YSGANFQRP 65 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F L IE G + T++V+ + RL R + + L G+ I + D Sbjct: 66 GFQAMLADIEAGKVG---TVIVKDMSRLGRNYLQVGMYTEMLFPQKGVRFIAINDGVDSA 122 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 + + ++ ++ + + S+ K ++ SG +T+ +D Sbjct: 123 MG--DNDFTPLRNLFNEWMVRDTSKK--------IKAVKKAKGMSGKPVTSKPVYGYLMD 172 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNF---------------S 226 + F+ D + ++ I++L + IA+ L + + Sbjct: 173 EDEN-FIIDEEAAPVVKQIYQLCLAGNGPTKIARMLTEQEIPTPGTLEYQRTGSIRRYHP 231 Query: 227 GKESAWGPSVIEKLLANKALIGICVPSYRAR------------GKGISEIAGYYPRVISD 274 G E W + + LL N+ G V + + + ++ +I Sbjct: 232 GYECKWATNTVVHLLENREYTGCLVNFKTEKPSYKMKHSIDNPIEKQAIFENHHEPIIDL 291 Query: 275 DLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHA--VSGSLHGYYVCP 332 + VQE+R + + L ++ C CG+ M Y+C Sbjct: 292 QTWERVQELRKQRKRPNR----YDDVGLFSGLLFCADCGHVMYQQRYQTDKRKQDCYICG 347 Query: 333 MRRLHR--CDRPSIKRDLVDYNIINELLFNCSKIQPVENK-------------------- 370 + C I+ DL+ +++ L + Q E + Sbjct: 348 SYKKRTADCTAHFIRTDLLTAGVLDNLRKVTAYAQKHEARFVKLLIQQNEMGGKRKQAAA 407 Query: 371 KDANETLELKIIELQMKINNLIVALSVAPEVTA--------IAEKIRLLDKELRRASVSL 422 E ++ +I EL I L + R L ++ L Sbjct: 408 TKQLEQVQSRIAELSRYIKRLYEDNVNGKINDERFMEMSADYEAEQRELKEKAAALQGEL 467 Query: 423 KTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKH 482 + VN+ F + + EL TL + EKI++ + I + Sbjct: 468 DKAQEATVNAEK-FMNVVRKYLSIEELTHTLLREMVEKIVVYECEYDENEVRHQRIDIYY 526 Query: 483 YPLMKVISAQQ 493 + K+ ++ Sbjct: 527 SFVGKIDLPEE 537 >UniRef50_A6NXM2 Putative uncharacterized protein n=4 Tax=Bacteria RepID=A6NXM2_9BACE Length = 544 Score = 340 bits (872), Expect = 1e-91, Method: Composition-based stats. Identities = 84/537 (15%), Positives = 177/537 (32%), Gaps = 74/537 (13%) Query: 3 KAIAYMRFSSPGQM--SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 + Y R S +S+ QR + +++ + D L + D G + G Sbjct: 7 RTAIYCRLSREDGDKVESNSIASQRAICEDYIARHEDLELVCEPFVDDG---YSGVSFNR 63 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 F + +AI G ++V+ L R SR + K+ GI I + D Sbjct: 64 PQFKKLEEAIRKG---ALDCIVVKDLSRFSRNYIDGGRYIEKIFPQLGIRFIAINDAYDS 120 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 + + + + S +++ S + K++ SG + + P Sbjct: 121 L--TGDPQSDSFVIPFKNLINDSYCKDISMKIRSSLEVKQK----SGEFVGSFAPYGYMK 174 Query: 181 DDK-RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKE---------- 229 + + + D + +++IF + + S+ IAK LN V + + Sbjct: 175 SPENKNQLIVDEAVSEYVQMIFSMYKDGFSIGRIAKRLNQMGVLSPMEYKHFAGVKFDTV 234 Query: 230 ------SAWGPSVIEKLLANKALIGICVPSYR------------ARGKGISEIAGYYPRV 271 + W ++++L N+ IG+ R ++ + + Sbjct: 235 FKTCDTAKWTYKAVQRILTNEVYIGVLAQGKRGTPNYKVRVVKSKDESEWVKVENAHEAL 294 Query: 272 ISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHA--VSGSLHGYY 329 +S + F AV+ + S + +L + C C MI + YY Sbjct: 295 VSYEDFMAVKVMMQRDMRCSP---DQDEAHLFSGFLFCGDCQQPMIRKTVPSKTKKYIYY 351 Query: 330 VCP-MRRLHRCDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETL----------E 378 VC + C SI V+ + + + +E+ E L E Sbjct: 352 VCSTNKHSRTCSPHSIAAKEVEEKVFRAIHDQIELVINLEHALAMIERLPSQSRKAFNYE 411 Query: 379 LKIIELQMKINNLIVA--------LSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGV 430 +I ++ +I + + + E K + +L +K + Sbjct: 412 AQIAKIGEEIERYQKLKLGLYENFIGGVIDKSEYFEFRNSYTKIIEDKQEALLRVKKEMK 471 Query: 431 N------SFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFK 481 + ++ + +N EL R + ++I+I+ +N +I F ++ Sbjct: 472 QTVTTGTTERNWVTLFKQYENVEELNRRVLMSLVDRILIH-ENHAIEIVFKYKDEYQ 527 >UniRef50_C7IHA5 Resolvase domain protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IHA5_9CLOT Length = 515 Score = 339 bits (870), Expect = 2e-91, Method: Composition-based stats. Identities = 88/506 (17%), Positives = 188/506 (37%), Gaps = 64/506 (12%) Query: 4 AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAF 63 A Y R+SS Q +S++ Q R I E+ + N Y D SA F Sbjct: 3 AAIYARYSSDNQRE-ESIDAQVRAINEYAQRNGYSI--VKIYSDEARSATTD---NRPQF 56 Query: 64 SEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNID 123 + + G ++V LDR SR++ A + + + +G+ +I++ +N Sbjct: 57 LQMMKDSATGL---FNAVIVHKLDRFSRDRYDSAFYK-RQLKKNGVKLISVLENLD---- 108 Query: 124 SLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDK 183 + P S+I ++ A S + V K+ +G + P + Sbjct: 109 --DSPESIILESVLEGMAEYYSANLAREVMKGMKETALQCRHNG----GTPPLGYDVLPD 162 Query: 184 RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLAN 243 ++ + + + I IF++ S N I +N ++ SG+ +G + + +L N Sbjct: 163 KS-YAINESEARIIRTIFEMYASGHSYNEIIDTMNREGYRSKSGRS--FGKNSLHDILRN 219 Query: 244 KALIGICVPSYRARG-------------KGISEIAGYYPRVISDDLFYAVQEIRLAPFGI 290 + G + + K I + P +IS +L+ V + + Sbjct: 220 EKYTGTYIFNRTVSKAGGKRNNHSSKSDKDIIRVENGMPAIISKELWNEVSKKMIGNKR- 278 Query: 291 SNSSKNPMLINLLRTVMKCEACGNTMIVHAV----SGSLHGYYVCPMRRLHR-CDRPSIK 345 + ++ + LL ++ C CG + + + +L+ Y C R+ R C SI+ Sbjct: 279 ARAANSAKETYLLSGLVFCGVCGGSFAGNRKFSGRNKNLYVTYECTTRKRKRTCCMKSIE 338 Query: 346 RDLVDYNIINELLFNCSKIQPVENKKDA---------------NETLELKIIELQMKINN 390 ++ ++ +I++LL + +E D E ++ +Q +INN Sbjct: 339 KNFIENLVIDQLLSDIFAPDAIERIADRLAEYAKTRTSEISKNIRDYENELAGIQTQINN 398 Query: 391 LIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELC 450 + A++ ++ +K+ L+ ++ ++ K + + I + ++ Sbjct: 399 TVNAIANGMFHPSMKQKMDELEARKSALTIRIEEAKRQAEINSPSRDFIRSYLEQDSDIK 458 Query: 451 RT-------LAYKTFEKIIINTDNKT 469 + K+I+ D Sbjct: 459 NKSPEDQKRIIQTYVVKVIVYNDRID 484 >UniRef50_Q1QRV3 Recombinase n=1 Tax=Nitrobacter hamburgensis X14 RepID=Q1QRV3_NITHX Length = 565 Score = 337 bits (866), Expect = 5e-91, Method: Composition-based stats. Identities = 127/438 (28%), Positives = 213/438 (48%), Gaps = 23/438 (5%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 +KK +Y+RFS+P Q GDSL RQ +W +++ DLG+SA+ G + + Sbjct: 6 LKKVYSYIRFSTPEQAKGDSLRRQIDNARQWCSERGLVMDESL--RDLGISAYTGTNRTT 63 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 GA FLD +E G I G+ LLVESLDRLSRE V +A RL ++ GI ++TL D Y Sbjct: 64 GALRSFLDLVESGKIPKGSILLVESLDRLSREAVIDAASRLFDLIRSGITIVTLVDGQEY 123 Query: 121 NIDSLNEPYS-LIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 + + LN +S LI +I + RA+EES K RV +W KK+Q A E G +T CP W+ Sbjct: 124 SAERLNNDWSPLIVSIAVMARAHEESRTKGKRVGEAWAKKKQAAREEGRPLTRRCPAWIQ 183 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKN----FSGKESAWGPS 235 + +K+ + P++ + ++ IF++ +E I K LN + + + W S Sbjct: 184 IANKK--YEVIPEKAQIVQRIFRMAIEGHGSRTILKALNSDGIPTFMVSKKKQNNGWQTS 241 Query: 236 VIEKLLANKALIGICVPS---YRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISN 292 + +LL ++ ++G P + AR + G+YP +I + F+ Q + Sbjct: 242 SLRRLLTSRTVLGEYQPHVGRHWARKPEGDPVKGFYPAIIDEATFWRAQSAMES-RRGRG 300 Query: 293 SSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHG--YYVCP-MRRLHRCDR-PSIKRDL 348 K + +LL+ + KC CG+ M + G Y+ C RR C + D Sbjct: 301 GRKGEGVAHLLQGLAKCGDCGSAMHIINKGPLPKGGTYFECSAARRKFECSNTERWRVDR 360 Query: 349 VDYNIINELLF-NCSKIQPVENKK---DANETLELKIIELQMKINNLIVALSVAPEVTAI 404 ++ ++ L + + + E + D + L+ K+ + + + LIV + + A Sbjct: 361 IEARLLKALTYIDVDAVVFGEQRDEVSDKVDILQAKLADAEQRRKRLIVLVESGDDAAA- 419 Query: 405 AEKIRLLDKELRRASVSL 422 E+ + + E++ L Sbjct: 420 -ERFQTVAAEVKHIKGEL 436 >UniRef50_A5ZV57 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A5ZV57_9FIRM Length = 542 Score = 337 bits (864), Expect = 7e-91, Method: Composition-based stats. Identities = 81/537 (15%), Positives = 182/537 (33%), Gaps = 77/537 (14%) Query: 4 AIAYMRFSSPG--QMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 Y+R S + DS+ QR+L+ E++ + D+ L Y D G F G + Sbjct: 12 VAIYIRLSREDGDKEESDSVGNQRKLLTEYVNKHDDFIL-YDVYIDDG---FTGTNFNRP 67 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F + IE + ++V+ L R R+ + ++ + I++ DN Sbjct: 68 DFHRMIADIEDNKV---NCVVVKDLSRFGRDYIDTGRYLERIFPELNVRFISVTDNIDSM 124 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 + + + + + + S++++ + K K++ G + A Sbjct: 125 KQAYD-----MLLPIKNIFNEQYARDISNKIQATVKSKQKA----GEFIGAFTSYGYKKS 175 Query: 182 D-KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFS-------------- 226 + V D + ++ +F + + +IAK LN + S Sbjct: 176 PANKNKLVIDEYASEVVKRVFTMYAQGIGKQSIAKILNAEGILCPSEYKKLNGENYKNCN 235 Query: 227 --GKESAWGPSVIEKLLANKALIGICVPSYR----------ARGKGISEIAGYYPRVISD 274 K S W S I+ +L N+ IG V + + + + +I Sbjct: 236 RLEKTSYWTYSTIKVMLQNELYIGNMVQGKKHQRMRSKQRPVEKENWIRVENTHEPIIDR 295 Query: 275 DLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMI---VHAVSGSLHGYYVC 331 L+ VQ++ N+ +KC CG M+ GS + C Sbjct: 296 QLWDKVQKLL---TKKHRDIDLETNKNIFAGFIKCGDCGRAMMKNFWRRADGSKSYSFYC 352 Query: 332 PMRRLHR---CDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDA--------NETLELK 380 + C ++ +++ ++ +L ++ ++ + ++ +++ Sbjct: 353 GTYKRSGKDYCTPHTLPFQVLNDIVLGDLKQIIRNVENLQELVKSQSFTATKIRKSTDIE 412 Query: 381 IIELQMKINN--------LIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNS 432 + +L+ ++ ++ S ++TL+ K S Sbjct: 413 LTKLKAELERVKKLKKSIYEDYKDELISKEEFLSYREDYQQKETLYSKQIETLEEKKKES 472 Query: 433 FSD------FYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKHY 483 ++ + L K+ EL R + + ++I + + K I + G +H Sbjct: 473 VTEDVFETPWLRRLLELKDIEELDRDIIVEMIDQITVYENRK-LKISYNFGNELEHL 528 >UniRef50_A3DBB4 Recombinase n=1 Tax=Clostridium thermocellum ATCC 27405 RepID=A3DBB4_CLOTH Length = 539 Score = 336 bits (862), Expect = 1e-90, Method: Composition-based stats. Identities = 90/550 (16%), Positives = 175/550 (31%), Gaps = 99/550 (18%) Query: 3 KAIAYMRFSSPGQMSGDS--LNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 + Y R S + SGDS + QR ++ + K N +D Y D G S + Sbjct: 8 RTAIYCRLSRDDEQSGDSMSIENQRSMLTRYAKENGLEIID--WYIDDGWSGT---NFDR 62 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 F IE G I +LV+ L RL R ++ ++ H + I + +N Sbjct: 63 PDFQRMKSDIEDGKI---DIVLVKDLSRLGRNQIETSLCIQVFFPQHDVRFIAVSENIDT 119 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 + L S +VK ++++ +G A P Sbjct: 120 AKGEDDFME------LRNLFNEWFVRDTSRKVKNGYRQRAL----NGDYTGAFAPYGYKK 169 Query: 181 DD-KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSG------------ 227 D+ + VPD + ++ IF++ +E S I+ L + Sbjct: 170 DEQDKHKLVPDENVAHVVKRIFQMAVEGYSPYKISMALRADKILTPRAYVAQEYQRYANV 229 Query: 228 ----KESAWGPSVIEKLLANKALIGICVPSYRARG------------KGISEIAGYYPRV 271 WG + I+ ++ NK +G V + E+ + + Sbjct: 230 FNPQYPYDWGATTIKIIIQNKVYLGHMVSHKYTKKSFKTKEVVAVPENEWIEVKNTHEPL 289 Query: 272 ISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLH----- 326 I ++ F Q+I + ++ + +++C CG ++ S + Sbjct: 290 IDEETFELAQKIIRVKKRPTKEGEHQ----IFAGLLRCSTCGQSLSFARGGNSKYSGGKG 345 Query: 327 --GYYVCPMRRLHR---CDRPSIKRDLVDYNIINELLFNCSKIQPVE------------- 368 G + C R C I + I+ ++ N + + E Sbjct: 346 GRGSFACNQSRRKGKEYCSFHYISYLDIYTVILEDIRKNAAIARENEAAFVEMVSDISKA 405 Query: 369 -------NKKDANETLELKIIELQMKINNLIVALSVAPEVTA--------IAEKIRLLDK 413 E L + ELQ + L ++ ++ R + + Sbjct: 406 KLKKQVSAAAKEKEKLRHRENELQAILKKLYEDNALGKITDEQFISLSKDFTDEQRQIKE 465 Query: 414 ELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNK----- 468 L+ L + K N+ F + + +EL + + + +K+++ K Sbjct: 466 RLKALENILSQVTEKQENTAK-FLELVREYTDIKELTKPILNELIDKVVVFDAEKARGDR 524 Query: 469 --TCDIYFMN 476 DIY+ Sbjct: 525 VQRIDIYYRF 534 >UniRef50_Q5WE11 Site-specific recombinase for integration and excision n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WE11_BACSK Length = 467 Score = 335 bits (861), Expect = 2e-90, Method: Composition-based stats. Identities = 88/472 (18%), Positives = 172/472 (36%), Gaps = 33/472 (6%) Query: 3 KAIAYMRFSSPGQM-SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 + Y+R S+ Q+ G S++ QR + ++ + + Y D G+SA K+ + Sbjct: 2 RTAVYIRVSTEEQVNEGYSISAQRERLQAYITSQN--WDAVGFYVDEGVSA---KNTERP 56 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 L IE G+I +LV LDRL+R V + + L +G + + Sbjct: 57 QLKRMLKHIEEGFI---DVVLVYRLDRLTRS-VLDLYQLLDTFERNGCKFKSATEVYDTT 112 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 + L+A A E E RV++ ++ ++ G +S Sbjct: 113 T-----AMGRLFITLVAALAQWERENLGERVRMGMTQRTREGQWHG----SSPAYGYKY- 162 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 + D ++ + I+ +E S +A LN+ + G AW S I ++L Sbjct: 163 -ENGIVSIDDEKANIVRWIYMSYIEGMSDRKLAVKLNEQGIPTQKG--GAWRESTIRRIL 219 Query: 242 ANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLIN 301 N+ G + R + + G P++I +F Q IR + + + Sbjct: 220 QNETYTGKLMWGVRVNKENAFSVDGAMPKIIEQGIFEKAQSIRKGRARV--HPRQATSKH 277 Query: 302 LLRTVMKCEACGNTMIVHAV--SGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINELL- 358 + ++C CG M H G + Y C R H CD P I + +++ I Sbjct: 278 IFSGALRCARCGAAMKGHKKTDKGKEYRSYRCINRYNHTCDMPMISQKILEKTFITYFKD 337 Query: 359 -FNCSKIQPVENKKDANETLELKIIELQMKINNLIVALS-VAPEVTAIAEKIRLLDKELR 416 QP + +++ +E ++ +++ + A + E+IR + + Sbjct: 338 VEIVGSYQPPKENEESLLNVEKELEQIKKRRKKWQYAWANDLMSDEEYTERIREEEAKEE 397 Query: 417 RASVSLKTLKSKGVNSFSDFYAI---DLTSKNGRELCRTLAYKTFEKIIINT 465 + + + + + +K +T T E I ++ Sbjct: 398 ELLKVIDNKQKQTSAEEVSILSAFITEQWNKLDVLEKKTFIQNTVESIRVDK 449 >UniRef50_Q3Z6A0 Resolvase domain protein n=6 Tax=Dehalococcoides RepID=Q3Z6A0_DEHE1 Length = 554 Score = 335 bits (859), Expect = 3e-90, Method: Composition-based stats. Identities = 92/511 (18%), Positives = 179/511 (35%), Gaps = 64/511 (12%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 K Y R SS Q S+ Q R + ++ N+ + D S Sbjct: 16 KVALYARVSSEAQDVELSIAAQLRALRDYAGKNNYQIT--YEFIDEAESGRTAA---RPE 70 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F + + I P +LV L+R +R + +L L+ GI VI++ + Sbjct: 71 FKRMIAMSKSS-IPPFEAILVWKLNRFARNRADSITYKL-LLQKKGIKVISINEPLD--- 125 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL-- 180 + P + +I S +K K+ +G + P L Sbjct: 126 ---DSPTGKLMEGIIESLDEFYSANLGQDIKRGMKENALRGFYNG----SQPPLGYELVK 178 Query: 181 ----DDKRTAFVPDPDRV---KTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWG 233 +R P+ D KT+ IF L + + IA LN +GK WG Sbjct: 179 VKDGPKQRNKLAPEADTSPGVKTVRYIFALADKGKGCKEIANILNREEYITKAGKP--WG 236 Query: 234 PSVIEKLLANKALIGICVPSYR-----ARGKGISEIAGYYPRVISDDLFYAVQEIRLAPF 288 + + K+L N+A G V R A+ + + +P +I + F +Q+ ++ Sbjct: 237 RTTVHKILCNEAYTGTLVWGARPSQGLAKNEEAVRLENAWPGIIDKETFQRIQQSMVSRQ 296 Query: 289 GISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHR---CDRPSIK 345 + + LL + C CG + H+ + YY C + C+ +I Sbjct: 297 PKNTHPRTVPSQYLLSGMAFCS-CGAALTGHSAKSGQYAYYQCNRKFKQGNGVCNCQAIP 355 Query: 346 RDLVDYNIINELLFNCSKIQPVENK---------------KDANETLELKIIELQMKINN 390 + ++ +I ++ + +E K+ L+ ++ +++ ++N Sbjct: 356 KTKLESAVIKQIKSKVLTEENLEELVKQVNEELESTSSHHKEKLAVLDAELDDIRQRLNR 415 Query: 391 LIVALSVAP-EVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGREL 449 L A+ +A +IR L + + S +++ V D + + + +L Sbjct: 416 LYEAIESGKLNYDDLAPRIRELRERQSKLEKSRVLAEAEMVADSDDNFNLGMVKAYANDL 475 Query: 450 CRTL-----------AYKTFEKIIINTDNKT 469 + L +KI ++ N + Sbjct: 476 KQLLNESEITDCKTFLKTFVKKIETDSRNVS 506 >UniRef50_C4Z7Z8 Site-specific recombinase n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4Z7Z8_EUBR3 Length = 496 Score = 335 bits (859), Expect = 3e-90, Method: Composition-based stats. Identities = 91/507 (17%), Positives = 171/507 (33%), Gaps = 49/507 (9%) Query: 5 IAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFS 64 Y+R S+ Q S + QRRL+ E+ N+ + +E+ G+S K + F Sbjct: 8 ALYIRVSTDKQEEL-SPDAQRRLLLEYAAKNNIILSNEYIFEEDGISGRKAD--KRPNFQ 64 Query: 65 EFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDS 124 + + P +LV R +R + + + L+ + ++VI++ + V Sbjct: 65 RMIGLAKSKE-HPFDAILVWKFSRFARNQEESIVYK-SLLRKNNVEVISVSEPLV----- 117 Query: 125 LNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDKR 184 + P+ + +I S S V + AS P S+ + Sbjct: 118 -DGPFGTLIERIIEWMDEYYSIRLSGEVTRGMTENAMRGNFQ-----ASPPLGYSITAHK 171 Query: 185 TAFVPDPDRVKTIELIFKLRME-RRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLAN 243 V K + +IF L E S+ I + LN K +GK + I+ +L N Sbjct: 172 ATPVIVESEAKIVRMIFNLYTEQGYSIIEITRQLNALGYKTRAGKS--FENRGIKYILTN 229 Query: 244 KALIGICVPSYR------ARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNP 297 + G V + R G + +IS + F + + + + + Sbjct: 230 EVYTGKSVWNKRDSASRPKDKTEWIIADGAHEPIISPEQFQRAKVRLESNYRPRYAKPSG 289 Query: 298 MLINLLRTVMKCEACGNTMI----VHAVSGSLHGYYVCPMRRLHRCD-RPSIKRDLVDYN 352 + + L ++KC ACG ++ G + Y C +C+ +I + Sbjct: 290 VCSHWLSGIVKCSACGRSLSISLAGANKQGKRYIYLQCYGYLKGKCNVSHAISEKKIVPM 349 Query: 353 IINELL---------FNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPE-VT 402 ++ L F N A + + ++ EL K + +A + + Sbjct: 350 VLAALKDAISSENLSFKVINTDSQSNYPAAIDIYQNQLDELTKKEKRIKMAYMDGIDTIE 409 Query: 403 AIAEKIRLLDKELRRASVSLKTL---------KSKGVNSFSDFYAIDLTSKNGRELCRTL 453 + LL +E + + L + + Y L + L Sbjct: 410 EYRKNKELLLEERKSIESRINALPKPAAKSDTTAALRSKIKTVYDSLLNEDLSMQTRNDL 469 Query: 454 AYKTFEKIIINTDNKTCDIYFMNGIVF 480 EKI+ N T D+YF Sbjct: 470 LKSVVEKIVFNKKEATIDVYFYTSNPL 496 >UniRef50_A6NPY6 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NPY6_9BACE Length = 483 Score = 334 bits (858), Expect = 3e-90, Method: Composition-based stats. Identities = 78/500 (15%), Positives = 177/500 (35%), Gaps = 51/500 (10%) Query: 2 KKAIAYMRFSSPGQMSGDS--LNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 + Y+R S + G+S ++ QR + ++ + Y D G + G Sbjct: 4 PRVGLYLRLSREDEEKGESQSISNQREYLRQYAAARG--WTVAAIYTDDG---YTGTSFN 58 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 F + L +E G I T+L + L RL R+++G + I + + Sbjct: 59 RPGFRQLLADVEAGKI---NTVLTKDLSRLGRDQIGTMYYYQIYFPQRRVRYIAVSEG-- 113 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 ID+ + +A + + S +V+ + + +++ SG + A P Sbjct: 114 --IDTGAAGSGELILPFLAAANDFYTADISRKVRTALEVRKK----SGRFIGAQPPIGYR 167 Query: 180 LDDKR-TAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESA------- 231 D + +PDP+ I L+F+ + S++ A+ + + + S + Sbjct: 168 KDPEEPGHLIPDPETGPIIGLLFRTFLSCGSVSGTARAMTEGGIPTPSQYKKGAQGRFPG 227 Query: 232 -WGPSVIEKLLANKALIGICVPSYRAR------------GKGISEIAGYYPRVISDDLFY 278 W +++ ++L N G + + + + + ++S +F Sbjct: 228 LWSGTMVRRILTNPTYAGHLTQNRARKVGYKVEKRVTLPREAWIVVPNTHQPLVSQQVFD 287 Query: 279 AVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHR 338 Q + + + +LL + C CG+ M + Y VC R Sbjct: 288 RTQALLAVRSYAPKAGNS----HLLTGLAFCADCGSPMTYVSSRDGTC-YMVCQGNRRGG 342 Query: 339 C-DRPSIKRDLVDYNIINELLFNCSKI-QPVENKKDANETLELKIIELQMKINNLIVALS 396 C ++ D V +I +L + E ++ + E K++ + + Sbjct: 343 CASSHCVREDAVLESIRRQLAVLAADTGAQAEPPEEHLPSREDKMVAMTRWADTAGRLYR 402 Query: 397 VAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYK 456 E+ L + RR + + +++ + + + + L R Sbjct: 403 DRMAGLLTEEEFCALLDQARRTREAAERYRTQASAACEAAWQAETLER----LDRDTLTA 458 Query: 457 TFEKIIINTDNKTCDIYFMN 476 E+++++ + KT +++F Sbjct: 459 LVERVLVHRE-KTLELFFRF 477 >UniRef50_Q0AWY2 Site-specific recombinase, putative n=7 Tax=Clostridiales RepID=Q0AWY2_SYNWW Length = 551 Score = 334 bits (857), Expect = 5e-90, Method: Composition-based stats. Identities = 89/530 (16%), Positives = 182/530 (34%), Gaps = 85/530 (16%) Query: 2 KKAIAYMRFSSPGQMSGDS--LNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 K Y R S ++ GDS + Q+ ++ ++ N +T + D G + G + Sbjct: 13 KITALYCRLSRDDELQGDSNSILNQKAILQKFAADNGLG--NTQYFVDDG---YSGTNFD 67 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 + + ++ G + T++V+ + RL R+ + + + N I I + N V Sbjct: 68 RPDWQRLMALVDEGKVG---TIIVKDMSRLGRDYLKVGMYTEMIFPNADIRFIAIN-NGV 123 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 + + + ++ I ++ S +++ +K K ESG + + P Sbjct: 124 DSANQQDSDFTPFINI----FNEFYAKDTSKKIRAVFKAK----GESGKPLCTNVPYGYK 175 Query: 180 LD-DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESA------- 231 D D + ++ D D K + IFKL M+ IAK L + ++N + Sbjct: 176 KDPDDKHHWLVDKDAAKVVREIFKLCMDGYGPTQIAKLLTERRIENPTSHAKRNGLNPPV 235 Query: 232 ---------WGPSVIEKLLANKALIGICVPSYRARGKG------------ISEIAGYYPR 270 W + + +L+ IG V R + Sbjct: 236 RQFYDDPYLWRDTTVTHILSRMEYIGHTVNFKTYRKSYKNKKQMHNDPSQWQIFKNTHEA 295 Query: 271 VISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHG--Y 328 +I + +F VQ+IR ++ + P +L ++ C CG + G H Y Sbjct: 296 IIDEAVFEIVQKIRDGRRRVTPLGEMP----ILSGMLFCADCGAKLYQVRGRGWEHSKEY 351 Query: 329 YVCPMRR--LHRCDRPSIKRDLVDYNIINELLFNCSKIQPVENK---------------- 370 +VC R C I+ +++ +++++ + + E++ Sbjct: 352 FVCATYRKIKGGCSSHQIRNVVIEEALLDDIRRITAFAREHEDEFLQMVTQKTKSALDRS 411 Query: 371 ----KDANETLELKIIELQMKINNLIVALSVAPEVTA--------IAEKIRLLDKELRRA 418 K E +I +L I L + L++ + Sbjct: 412 LRENKRELEQATQRIRKLDEIIQRLYEDNIEGKISDERFAKMTANYEAEQHTLEQRVAEL 471 Query: 419 SVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNK 468 S+ T K +N+ F + EL + + E++ + K Sbjct: 472 RASIATEKESALNA-DHFLTLVRKYTEIPELTAEIIREFVERVYVYKAEK 520 >UniRef50_A6T2W2 Site-specific recombinase n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T2W2_JANMA Length = 616 Score = 334 bits (856), Expect = 6e-90, Method: Composition-based stats. Identities = 139/527 (26%), Positives = 240/527 (45%), Gaps = 32/527 (6%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 M A +Y+RFS+P Q+ GDSL RQ L + + + T+ +DLGLSAF + + Sbjct: 1 MPIAYSYIRFSTPEQLKGDSLRRQTELSEAYAEKHGLQLDTTLKLQDLGLSAFDRSNVEK 60 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 GA FL AIE G I PG+ L+VESLDRLSR +V +A+E I+ GI ++TL D Y Sbjct: 61 GALGAFLKAIEQGRIKPGSFLIVESLDRLSRAQVTDALEVFLSIIRKGITIVTLNDGYEY 120 Query: 121 NIDSLNEPY-SLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 + ++ E L+ +I I QRA EESE K+ R++ +W K +A + +TA C W+ Sbjct: 121 STQTMRENSYKLLISITIMQRAFEESETKAKRLRAAWINKANNA--NVRKITARCGGWMK 178 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEK 239 L D R+ F P RV+ + I ++ ++ + IAK LND V +++G W S + K Sbjct: 179 LSDDRSEFEFIPGRVEIVREIIQMSLDGMGQSVIAKRLNDRGVVSWTGANG-WHTSTLAK 237 Query: 240 LLANKALIGICVPSYRARGK---GISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKN 296 +L N AL G P + GK + Y+P +++++ F +++ R + Sbjct: 238 ILNNPALYGAFQPHIKTDGKLLPHGDPVKDYFPALMTEEQFLILKKTRSERLFAGTGRRR 297 Query: 297 PMLINLLRTVMKCEACGNTMIVHAVS-----------GSLHGYYVC-PMRRLHRCDRPSI 344 + NLL + C CG +M++ + VC RR +C Sbjct: 298 NHVPNLLSGIAVCGYCGGSMVLMGNTTLVNKPDGSTERINKKSLVCDNGRRGFKCWALRW 357 Query: 345 KRDLVD------------YNIINELLFNCSKIQPVENKKDANETLELKIIELQMKINNLI 392 K + + ++NE+ S +E D K+ +L K+ N+I Sbjct: 358 KYEHFETSFLTSCRLIDLNLMLNEVEAGTSLQSDIERLNDQITLQTSKLEDLGKKVTNII 417 Query: 393 VALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRT 452 A+ + ++++ +++E+ L+ + ++ D + +E Sbjct: 418 EAIEDGLASQTLKDRLQSIEQEISAGLDQKAILEKQLTDATFTSKTADQNIETMQEAIDR 477 Query: 453 LAYKTFEKIIINTDNKTCDIYFMNGIVFKHYPLMKVISAQQAISALK 499 ++ E++ + I V + +P+ ++ A+ K Sbjct: 478 ISQLEGEELFVFRSKLAEAIRKTIKQV-RLFPVGRLTPAEDIEELRK 523 >UniRef50_A5FSM5 Resolvase, N-terminal domain n=2 Tax=Dehalococcoides RepID=A5FSM5_DEHSB Length = 517 Score = 334 bits (856), Expect = 7e-90, Method: Composition-based stats. Identities = 83/531 (15%), Positives = 175/531 (32%), Gaps = 65/531 (12%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 KK Y R SS Q S++ Q + I E+ K N Y + D + Sbjct: 6 KKVAIYARVSSDKQDVDLSISAQLKAIREYAKNNG--YEVVREFVDEAETGRTTA---RP 60 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 AF E + H P +LV R +R + ++I ++ + VI++ + Sbjct: 61 AFREMISLARHPQ-KPFDVILVWKYSRFARSR-EDSIVYKAMLRKSEVHVISINEPFD-- 116 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL- 180 + P + +I S+ V ++ G +++ P Sbjct: 117 ----DTPTGRLLEAIIESLDEFYSDNLGEEVTRGMRESA----ARGFYLSSKPPYGYRKV 168 Query: 181 -----DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPS 235 + + T +P++ + +F ++ + L IAK LN + + GK WG + Sbjct: 169 RFKDGEKEHTKLEIEPNQAGIVSSMFTDALKGKGLTEIAKELNHKGIASPRGKG--WGKT 226 Query: 236 VIEKLLANKALIGICVPSYRARGK-GISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSS 294 + +++N+A G V ++ + P +IS +F Q++ Sbjct: 227 AVRTIMSNEAYAGSFVWGRNSKRGLAPIRVENACPAIISRQVFDNAQKLIRERAPKLTHP 286 Query: 295 KNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHR---CDRPSIKRDLVDY 351 K LL C CG MI + YYVC C + Sbjct: 287 KRTCSRFLLSGFTFCSHCGKAMIGQDAKSGKYSYYVCGTLNKKGAGSCPSHYFNSRSFEE 346 Query: 352 NIINELLFNC------SKIQPVENKK---------DANETLELKIIELQMKINNLIVALS 396 ++ + N ++ + N++ + + + ++ E ++ L A+ Sbjct: 347 TVVKVIRENILTEEHLKRLIEMVNQEMDVNSRGYQEELDAVLEEMNETNRRLERLYDAVE 406 Query: 397 VA-PEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGREL------ 449 + +A +I L + + + + + + + ++ +++ Sbjct: 407 TGKIPLADLAPRIHDLKLRIEKLQERKIQITNNMSDRKVELASPEIVKSYVKDMRQVLQE 466 Query: 450 -----CRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKHYPLMKVISAQQAI 495 R +KI + GI+ P+ V+ + + Sbjct: 467 SELTGKRAFLKGFIKKIEVKD---------RQGIIHYLLPINGVLEERIGV 508 >UniRef50_A8SHS6 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SHS6_9FIRM Length = 564 Score = 333 bits (855), Expect = 9e-90, Method: Composition-based stats. Identities = 77/530 (14%), Positives = 169/530 (31%), Gaps = 83/530 (15%) Query: 4 AIAYMRFSSPGQMSGDS--LNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 Y R S+ + G+S + Q+ L+ +++ + + TY D G + G + Sbjct: 8 VGIYCRLSNDDERDGESVSIENQKLLLQNYVRQRG--WNEVDTYIDDG---YSGTNFDRP 62 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 ++ + I +LV+ L R R + L + G I L + Sbjct: 63 GVKRLIEDAKAKRI---NVILVKDLSRFGRNYIEFGQYTDYLFPSLGCRFIALNNGIDT- 118 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 +S N ++ + + S S K ++ E+G M D Sbjct: 119 -ESTNGSTDVMCFLNL--FNEFYSRDTS----KKVKAVKKACAENGKFMGTYPAYGYKRD 171 Query: 182 D-KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKN-------------FSG 227 + V D D + IF++R +AIA LN+ + + Sbjct: 172 PADKHHLVIDEDTAPVVRRIFEMRAAGTGFHAIAVTLNEEGIPSPGVLYYQRKGQSDPRR 231 Query: 228 KESAWGPSVIEKLLANKALIGICVPSYRAR------------GKGISEIAGYYPRVISDD 275 W ++ ++ ++ IG V + + G + +IS + Sbjct: 232 VNHKWADQTVKNIVRSEVYIGNMVQGKTGTMSYKSRKLVGKPEEEWIRVQGTHEPIISQE 291 Query: 276 LFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTM-------IVHAVSGSLHGY 328 L+ V I S+++ + ++ C CG M + + Sbjct: 292 LWDTVASIDKKKVRKSSAADGYKS--IFTGLVYCADCGFKMRNHVERFTYKDGTPGRYSS 349 Query: 329 YVCPMRRLHR---CDRPSIKRDLVDYNIINELLFN--------------CSKIQPVENK- 370 ++C C +I +++ ++ ++ +++ E K Sbjct: 350 FICGNYSRSGKGACTVHTIYENVLTQLVLEDIREKAHFAEYDPEQLIQQIIRLKDKEAKS 409 Query: 371 -----KDANETLELKIIELQMKINNLI-VALSVAPEVTAIAEKIRLLDKELRRASVSLKT 424 + +T ++ EL+ + NL + T + + E S ++ Sbjct: 410 RLSSCEQELKTYTARLSELERLMQNLYEDKCAGTIPQTVFQTLMHKYEAERAEKSEAIPE 469 Query: 425 LKSKGVNSFSD------FYAIDLTSKNGRELCRTLAYKTFEKIIINTDNK 468 L+ K + + + I EL ++ ++ ++I + K Sbjct: 470 LEHKVKSYLENRTDANRWLTIIRRYTEITELDESILFELVDRIEVGETKK 519 >UniRef50_C7HJH4 Resolvase domain protein n=1 Tax=Clostridium thermocellum DSM 2360 RepID=C7HJH4_CLOTM Length = 383 Score = 332 bits (853), Expect = 1e-89, Method: Composition-based stats. Identities = 135/372 (36%), Positives = 186/372 (50%), Gaps = 14/372 (3%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 KA +Y+RFSSP Q GDSL RQ +L E+ K + DT+ D GLSAFKG H G Sbjct: 3 PKAYSYIRFSSPEQEKGDSLRRQIQLSEEYCKQHGLILDDTLKLTDRGLSAFKGIHRTKG 62 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 A EFL +E G I PG+ LLVE+LDRLSRE++ +A+ + I+ GI ++TL D Y+ Sbjct: 63 ALGEFLRLVEEGKIPPGSVLLVENLDRLSREQILDALNQFTSIIKAGIKIVTLQDGMEYD 122 Query: 122 IDSLNEPY-SLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 +S+N+ + LI +I RA++ESE KS R+ W+ KR A G +TA P WL L Sbjct: 123 QESINQNWAQLIISITYMARAHDESETKSKRISAVWENKRSKAGNGGEKLTAKAPAWLKL 182 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLND-----HAVKNFSGKESAWGPS 235 RT F+ P+ K IELIF+ ++ + IA+ LN+ + K W S Sbjct: 183 SQDRTKFILIPEAAKAIELIFRKKLAGKGAERIARELNEDPNIWEPPRTGPKKTGGWRGS 242 Query: 236 VIEKLLANKALIGICVPSYRARGKGIS---EIAGYYPRVISDDLFYAVQEIRLAP--FGI 290 I K+L ++A+IG P GK I Y+P VI +LFY VQ A Sbjct: 243 YINKILRSRAVIGEFQPHKLVDGKRQPIGDPIPDYFPPVIDKELFYQVQAQLQANAEKKG 302 Query: 291 SNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLH--GYYVC-PMRRLHRCDRPSIKRD 347 + + + NL V+KC CG M Y VC RRL C I+ + Sbjct: 303 NAGGRTGKVSNLFTHVIKCGLCGYPMHFINKGKPPKGGKYLVCDASRRLKTCTAKPIRYE 362 Query: 348 LVDYNIINELLF 359 + + Sbjct: 363 EFEQLFFDNFEE 374 >UniRef50_A5N289 Putative uncharacterized protein n=3 Tax=Firmicutes RepID=A5N289_CLOK5 Length = 550 Score = 332 bits (853), Expect = 2e-89, Method: Composition-based stats. Identities = 81/529 (15%), Positives = 174/529 (32%), Gaps = 84/529 (15%) Query: 2 KKAIAYMRFSSPGQM--SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 K Y R S ++ +S+ Q+ ++ ++ + N + Y D G+S Sbjct: 21 KITALYCRLSRDDELAGDSNSIVNQKAILKKYAEDNGFR--NIEFYVDDGVSGTT---FD 75 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 F+ + +E G I T++++ + R R+ + + + I + + Sbjct: 76 RPDFNRMIADVESGRIG---TIIIKDMSRFGRDYLKVGYYTEIMFPEADVRFIAINNGID 132 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 + + + ++ I+ A + S +++ +K K +SG + + P Sbjct: 133 -SANQADSDFTPFLNIINEWYA----KDTSKKIRAVFKSK----GQSGKPLCTNPPYGYI 183 Query: 180 LD-DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFS------------ 226 D + + ++ D + + IF+L M IAK L + + Sbjct: 184 KDPEDKLHWIIDEKAAEVVRDIFRLCMAGFGPTQIAKQLEKRCIDTPTVHLRKMGINTPA 243 Query: 227 ---GKESAWGPSVIEKLLANKALIGICVPSY------------RARGKGISEIAGYYPRV 271 AW + +LA +G V + + + Sbjct: 244 RPPENPYAWSARTVADILAKMEYLGHTVNFKTSKKSYKSKVKIMNNPEEWLVFKNTHEAI 303 Query: 272 ISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLH--GYY 329 I + + VQ+IR S + +L +M C CG + G H Y+ Sbjct: 304 IDEGTWETVQKIRDGKRRPSRLGEMG----MLSGMMFCADCGAKLYQVRGKGWTHDKEYF 359 Query: 330 VCPMRRLHR--CDRPSIKRDLVDYNIINELLFNCSKIQPVENK----------------- 370 VC R + C I+ +V+ ++ +L S + E + Sbjct: 360 VCATYRKKKGMCSSHQIRNVVVEQLLLEDLRRVTSFAKDHEQEFIRIVMNNSEKELAKEL 419 Query: 371 ---KDANETLELKIIELQMKINNLIVALSVAPEVT--------AIAEKIRLLDKELRRAS 419 + E + +I ++ I L + + + L++++ Sbjct: 420 RQSQKEYEQAQTRIADIDKIIRKLYEDNVMGKIPEERFYKMSAEYEAEQKALEEKITELK 479 Query: 420 VSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNK 468 ++ T + +N F A+ EL + + +KII+ K Sbjct: 480 HTIDTANEQSLN-TDRFLALVKKYTEITELDAEIIREFIDKIIVFKAEK 527 >UniRef50_C5RQ70 Resolvase domain protein n=4 Tax=Firmicutes RepID=C5RQ70_CLOCL Length = 529 Score = 332 bits (852), Expect = 2e-89, Method: Composition-based stats. Identities = 98/521 (18%), Positives = 184/521 (35%), Gaps = 61/521 (11%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 MKK AY R S+ S Q A ++K N+++ Y D G+SA K + Sbjct: 27 MKKVAAYARVSTDNDEQLSSFEAQMDYYARYIKSNTEWSFV-EVYTDEGISATSTK--KR 83 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 F+ + +G I ++ +S+ R +R V + + ++ + G++V +N Sbjct: 84 DGFNRMITDALNGKI---DLIITKSVSRFARNTV-DTLTTVRQLKEKGVEVYFEKENIY- 138 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 +L+ L+ I+ + A EES S V +K+ D S + Sbjct: 139 ---TLDSKGELLITIM-SSLAQEESRSISENVTWGQRKRFADGKVS---LPYKQFLGYEK 191 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 + I I+KL +E ++ +AIAK+L + GKE W S + + Sbjct: 192 GED-GLPKIVEKEATIIRTIYKLFLEGKTPSAIAKHLTLSKIPTPGGKE-IWQASTVSSI 249 Query: 241 LANKALIGICVPSYR------ARGKGISE-------IAGYYPRVISDDLFYAVQEIRLAP 287 L N+ G + + K I+E + +P +I+ ++F VQ Sbjct: 250 LKNEKYKGDAILQKSFTIDFLTKKKKINEGEIPQYYVENSHPAIITPEVFDLVQHEIKKR 309 Query: 288 FGISNSSKNPMLINLLRTVMKCEACGNTM---IVHAVSGSLHGYYVCPMRRLH--RCDRP 342 + + C CGN + H+ S + C + + +C P Sbjct: 310 KDAKGYKTSSGC---FSGKIVCGKCGNFYGSKVWHSTSKYRRIIWQCNSKFKNNEKCGTP 366 Query: 343 SIKRDLVDYNIINELLFNCSKIQPVENKKDAN-------ETLELKIIELQMKINNLIVAL 395 + D + + + + + L+ + +LQ ++ + L Sbjct: 367 HLYEDKIKQAFVEVFNSVIENKEEILAGYEGILQALTDTTKLDKESFKLQSELEVVSEML 426 Query: 396 SVAPE--------VTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKN-- 445 E E+ + L + L+ + K + + +I K Sbjct: 427 KKCVEENAHSALNQDEYEERYKALAERYENIKKGLEEIDEKRLERSAKHESITAFIKELE 486 Query: 446 -----GRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFK 481 E L T EKII+NT+ + F +G+ + Sbjct: 487 QREGLITEFDENLWAGTIEKIIVNTEEQ-ITFVFKDGMEIE 526 >UniRef50_C4ZFI3 Site-specific recombinase n=3 Tax=Clostridiales RepID=C4ZFI3_EUBR3 Length = 563 Score = 331 bits (849), Expect = 5e-89, Method: Composition-based stats. Identities = 100/543 (18%), Positives = 185/543 (34%), Gaps = 80/543 (14%) Query: 4 AIAYMRFSSPGQM-------SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGK 56 A Y+R S +S++ Q+ LI ++LK D + ++ D G + G Sbjct: 11 AAIYVRLSKEDGDISSSAKLESNSISNQKALILDFLKDKKDIEVVSVR-VDDG---YSGS 66 Query: 57 HAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCD 116 + + AF L+ I HG + ++V+ L R RE + +L G+ I + D Sbjct: 67 NFERPAFQAMLEDIRHGIV---DCVVVKDLSRFGREYIDSGKYIERLFPALGVRFIAIND 123 Query: 117 NTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPR 176 N +I + A S +++ + + KR+ G +T Sbjct: 124 NYDSLKGKNQADEIIIPFKNLINDA--YCRDISIKIRSNLEIKRKK----GECVTPFVAF 177 Query: 177 WLSLDD-KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNF---------- 225 + DP ++ IFK++++ S +AIA LN+ + + Sbjct: 178 GYRKTKTDKHKLEIDPSAGGVVQDIFKMKLQGMSQDAIANRLNELGILSPFEYKISSGSR 237 Query: 226 ------SGKESAWGPSVIEKLLANKALIGICVPSYRARGK------------GISEIAGY 267 +++ W + ++L N+ IG V R I Sbjct: 238 YETGFRQKEQALWSSVTVRRILENEVYIGNLVQGKRTTPNHKVKQTYVKPEDDWIRIEKN 297 Query: 268 YPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVS--GSL 325 + ++SD F VQ + S K + LL + C CG M + G Sbjct: 298 HEPLVSDRDFEIVQRLLGMDTRTSPDQK---QVYLLSGIAVCADCGAPMTRKVSTVAGKK 354 Query: 326 HGYYVCP-MRRLHRCDRPSIKRDLVDYNIINELLFNCSKIQPVE--------------NK 370 + YY+C + RC I ++ ++ L + I ++ N Sbjct: 355 YAYYLCSTNKETKRCSSHRIPEKDLEDAVLVMLKQHIQNILHLKRVLEFIGTVPFQGINM 414 Query: 371 KDANETLELKIIELQM----KINNLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLK 426 K + LE K E + ++ E K LR A S++ ++ Sbjct: 415 KKRQDRLEKKKQEKERCKELRMMLYSDMKEGIVSKEDYVELHAAYGKRLRNAEESIRAIQ 474 Query: 427 SKGVNSFSDFYAIDL------TSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVF 480 + N + ++ EL RT+ + +I + D K +I F + Sbjct: 475 KEMDNELEKADKANTWLDYFVKYQDIEELSRTVVVELIRQIRVY-DKKNIEITFDFDDCY 533 Query: 481 KHY 483 + Sbjct: 534 QTL 536 >UniRef50_A7B0Q2 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A7B0Q2_RUMGN Length = 552 Score = 330 bits (848), Expect = 5e-89, Method: Composition-based stats. Identities = 85/531 (16%), Positives = 175/531 (32%), Gaps = 79/531 (14%) Query: 1 MKKAIAYMRFSSPGQM-------SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAF 53 M A Y+R S + DS++ QR L +++ D L Y D G + Sbjct: 6 MYHAAIYLRLSRDDEDIDGSAKRESDSISSQRELARSFVREQPDMEL-FDIYIDDG---Y 61 Query: 54 KGKHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVIT 113 G + F + IE+G + ++V+ L R R+ + K + I Sbjct: 62 SGANFDRPDFKRMMADIENGNV---NCVVVKDLSRFGRDYIEAGRFIQKTFPAFSVRFIA 118 Query: 114 LCDNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTAS 173 + D+ + ++ + + + + + S +VK + KR+ G + A Sbjct: 119 ITDHYDSL--TADQSTTSLVIPVKNFVNDSYCQDISEKVKSHQRVKREK----GKFIGAF 172 Query: 174 CPRWLSLD-DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNF------- 225 D + + V D K ++ IF +++ S AIA LN++ + + Sbjct: 173 AVYGYQKDHEDKNKLVIDEYAAKIVKNIFTWKLDGMSNLAIANRLNENGIFSPLEYKKSY 232 Query: 226 ---------SGKESAWGPSVIEKLLANKALIGICVPSYRARGK------------GISEI 264 +G S W ++++L N+ G+ V R + ++ Sbjct: 233 GEHYSTGFQAGIVSKWSAVAVKRILTNEIYTGMMVQGKREKVNYKVDKILEKPESEWFKV 292 Query: 265 AGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVH--AVS 322 G + +IS + + VQ + + K ++ ++ C C M+ Sbjct: 293 EGTHEAIISKEDYQNVQRLLKVDTR---AGKGKEKAHMFSGLLFCGDCKEPMVRRINRYK 349 Query: 323 GSLHGYYVCPMRRLH-RCDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLE--- 378 G+ YY+C R C R SI + + + + + V + +T E Sbjct: 350 GTEKIYYICSTRNRSEGCSRHSIPETDLKRVVFQIIRSQVTLLMDVNRQMQYLQTKEMNF 409 Query: 379 -------LKIIELQMKINNLIVALSVA--------PEVTAIAEKIRLLDKELRRASVSLK 423 +I L+ + + + T ++ +K+ +L Sbjct: 410 EDVVGFDKEITRLRNEQEKYLELRAGLYEDLKTGIITQTDFKNFSKIYEKQYIETEKALT 469 Query: 424 TLKSKGVNSFSD------FYAIDLTSKNGRELCRTLAYKTFEKIIINTDNK 468 + F + + L R ++I + + K Sbjct: 470 RQEDMLKKLFYNGVQSGVKLERLKETMQIATLDRDTLLAFVDRIEVYEEKK 520 >UniRef50_A0LPU3 Recombinase n=6 Tax=Deltaproteobacteria RepID=A0LPU3_SYNFM Length = 528 Score = 330 bits (846), Expect = 9e-89, Method: Composition-based stats. Identities = 89/511 (17%), Positives = 175/511 (34%), Gaps = 63/511 (12%) Query: 3 KAIAYMRFSSPG--QMSGDSLNRQRRLIAEWLKVNSD--YYLDTITYEDLGLSAFKGKHA 58 + Y R S + +SL+ QR +++ + Y+D G F G + Sbjct: 16 RCAIYTRKSHEEGLEQEFNSLDAQRESAEHYIEAQRMRGWTALPDRYDDGG---FSGGNM 72 Query: 59 QSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNT 118 + L I+ G I ++V +DRLSR + + ++ + L G+ +++ + Sbjct: 73 ERPGLRRLLADIDAGKI---DVIVVYKVDRLSRS-LLDFMKMIDLFNEKGVSFVSVTQHF 128 Query: 119 VYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWL 178 S +P + ++ A E E+ + R++ K A G Sbjct: 129 -----STTDPTGRMFLGILITFAQYEREVIAERIRD----KVAAAKRRGKYCGGVPILGY 179 Query: 179 SLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESA------- 231 +D + +PD +T++ IF+ ++ S + + LN+ + + Sbjct: 180 DVDRDNKKLLVNPDEARTVQYIFRRFIQIGSAKKLGQELNEQGYRTKAWTTKKGKVRDGS 239 Query: 232 -WGPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGI 290 W + I +LL N+ IG R+ G + +I + VQ I + Sbjct: 240 EWNTAHIYRLLNNRIYIGEIAHKDRSY-------PGEHEGIIDRATWDKVQAILEDNKPV 292 Query: 291 SNSSKNPMLINLLRTVMKCEACGNTM--IVHAVSGSLHGYYVC---PMRRLHRCDRPSIK 345 S ++ L+ V++C CG M +G + YY+C R + RC I Sbjct: 293 KVSMARTKMVAPLKGVIRCGHCGCAMGPTYARKNGRHYTYYICQKDSKRTVSRCPLKRIP 352 Query: 346 RDLVDYNIINEL-------------LFNCSKIQPVENKKDANETLELKIIELQMKINNLI 392 ++ +I +L F I+ E ++ + +L+I Q + L Sbjct: 353 AGDIEQAVIEQLSAVFRTPTLVAKTYFAARDIEQAERERLFKQNAQLEIELSQAREQALE 412 Query: 393 ------VALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAID----LT 442 A +T + + L K+L S + + + A Sbjct: 413 LMKPGNDQPGKAEMLTTVNRQAVELSKQLTHVSERCRAYQGNSITEQDVSEAFQNVEGFW 472 Query: 443 SKNGRELCRTLAYKTFEKIIINTDNKTCDIY 473 L +K+ I ++ Sbjct: 473 EDLFPVERNRLIRLLVDKVEIRETGIDMELR 503 >UniRef50_Q188V9 Conjugative transposon site-specific recombinase n=7 Tax=Firmicutes RepID=Q188V9_CLOD6 Length = 533 Score = 329 bits (844), Expect = 1e-88, Method: Composition-based stats. Identities = 81/541 (14%), Positives = 172/541 (31%), Gaps = 90/541 (16%) Query: 3 KAIAYMRFSSPG--QMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 K Y R S +S+ QR ++ + K N + Y D G F G Sbjct: 11 KVALYSRLSRDDGLDKESNSIANQREMLKRYAKEN--KFYVYDEYIDDG---FSGTTFNR 65 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 A + + IE G + +LV+ + RL R ++ + + I + D Sbjct: 66 PALNRMFEDIEAGKV---NVVLVKDMSRLGRNNALFMYYVEEVFPDLDVRFIAIND---- 118 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 +D+ + ++ + + S +++ S + +G A P + Sbjct: 119 MVDTAQDDNEIMP--FKSVLNEYYARDISKKIRSSIRTTAL----TGGFTGAFAPYGYLV 172 Query: 181 DDK-RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESA-------- 231 D + + + DP+ ++ IF+L + S + IA+ L + + Sbjct: 173 DPENKKKLIVDPETAPIVKRIFELSQQGTSTHQIARILCKDGILVPRAYRAKKKGILEQS 232 Query: 232 --------WGPSVIEKLLANKALIGICVPSYRAR------------GKGISEIAGYYPRV 271 W ++ +L N+ +G V + + + + Sbjct: 233 KGFTFPTDWVGKNVKMILENQVYLGHMVSHKSQTKSFKNKKIVPVPKEDWIVVENTHEAI 292 Query: 272 ISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVC 331 I + F VQ+ + + K N+ ++KC CG + +G+ + C Sbjct: 293 IDKETFEIVQKFISVKKQPNKTGK----PNIFVGLVKCPDCGRNLAYSNPNGNEPR-FRC 347 Query: 332 PMRRLHR--CDRPSIKRDLVDYNIINELLFNCSKIQP--------------------VEN 369 + C +I + + N++ + + ++ + Sbjct: 348 RTYARNTELCTTHAISYKALYEIVQNDIKNHVNSMEELGDHFIKEMRELSETSGSQKIHQ 407 Query: 370 KKDANETLELKIIELQMKINNLIVALSVAPEVTAIAEKIR-LLDKELRRASVSLKTLKSK 428 +LE +I E+ LI ++ K+ + E S + LKSK Sbjct: 408 FNQELVSLEKRIDEIDSIFTKLIEQNALGKITDERFSKMSMNYETEQAEVVQSYRELKSK 467 Query: 429 GVNSFS------DFYAIDLTSKNGRELCRTLAYKTFEKIIINTDN-------KTCDIYFM 475 + F K+ EL R++ + + I + + +I + Sbjct: 468 IKSEEEKVQGTDRFLETISKYKDVTELNRSMLCELIDSIYVYQAEGIGKERTQKVEINYR 527 Query: 476 N 476 Sbjct: 528 F 528 >UniRef50_C0FPH2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0FPH2_9FIRM Length = 552 Score = 329 bits (844), Expect = 1e-88, Method: Composition-based stats. Identities = 86/535 (16%), Positives = 177/535 (33%), Gaps = 68/535 (12%) Query: 3 KAIAYMRFSSPGQ-MSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 +A Y+R S S+ Q+ +IA +L+ + TY D G G + Sbjct: 22 RAAIYVRLSVEDTHTHSVSIETQQMIIARYLEQYPE-ISVYDTYIDNGA---TGTNFHRP 77 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F + L IE G++ ++V+ L RL R + + I I + +N Sbjct: 78 GFQQMLSDIEAGHV---NCVIVKDLSRLGRNTIDTGYYIEQYFRIRNIRFIAVNENFDTA 134 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWL-SL 180 + + +S I L + +++ +++ A++ G + A P Sbjct: 135 --APEDAHSGIIIPLRNMINEAYALDIGRKIRA----QQRQAMKDGKFIGARTPYGYLKA 188 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKE----------- 229 +D + DP ++ +F+ E LN IA LN+ + S + Sbjct: 189 EDDCHQLIIDPVAAVVVQRMFRWASEGAGLNTIAVRLNEAGILTPSHYKKMQGKITHENL 248 Query: 230 ---SAWGPSVIEKLLANKALIGICVPSYRA---------RGKGISEIAGYYPRVISDDLF 277 W + +L ++ G V + + + + +IS + F Sbjct: 249 LGSGKWQTRTVGVILRSEVYTGDLVQGQTKTVDHRQVKADAEEWTVVRDTHEAIISREQF 308 Query: 278 YAVQEIRLAPFGISNSSKNPMLI-NLLRTVMKCEACGNTMIVHA---VSGSLHGYYVC-- 331 AVQEI + + + NLL+ + C CG ++ +Y C Sbjct: 309 AAVQEILNQTASRAKAREVKAFTPNLLKGKVFCAHCGGSLHRQRNIRKKSDDVYFYHCLS 368 Query: 332 -PMRRLHRCDRPSIKRDLVDYNIINEL------------LFNCSKIQPVENKKDANETLE 378 R C +I+ D + + + L L + ++ + E + Sbjct: 369 QSRIRKDACPGVTIREDALLDMLADMLQDALDTALGQYTLSLAELPRQAADRAELREKIT 428 Query: 379 LKIIELQMKINNLIVALSVAPE----VTAIAEKIRLLDKELRRASVSLKTLK---SKGVN 431 + E+Q + + + + + +V ++ L+ Sbjct: 429 SRKQEIQRLRGIVRSLYENLVQGVLTKDEYFDYKEKYESRIADLAVEMEQLEDGLRTMDT 488 Query: 432 SFSDFYAIDLT---SKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKHY 483 A++ K R L L + ++I ++ D + + + F+ Y Sbjct: 489 QLEQHRALEQDAAQIKTDRALTGALIERLIDRIEVSHDKQ-ITVRYRFQSEFETY 542 >UniRef50_A5N4T4 Putative uncharacterized protein n=7 Tax=Bacteria RepID=A5N4T4_CLOK5 Length = 559 Score = 329 bits (844), Expect = 2e-88, Method: Composition-based stats. Identities = 87/541 (16%), Positives = 179/541 (33%), Gaps = 82/541 (15%) Query: 5 IAYMRFSSPG----QMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 Y+R S + +S+ Q++L+ ++ + + D + TY D G G Sbjct: 26 AKYIRLSKEDLNRGKDDSNSVTNQKKLLDDYYRQHLDEFESAETYVDDGC---TGTDTNR 82 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 F L I + ++V+ L RLSR L + + I+L + Sbjct: 83 ADFQRLLADIYAKKV---NCVIVKDLSRLSRNYTDAGSLIENLFVQMNVRFISLAEGVDS 139 Query: 121 --NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWL 178 N DS++ I ++ ++ S +++ + K++ +G + + P Sbjct: 140 YLNPDSVSSILVPITNVMN----DQYCYQTSKKIRQVFDYKKR----NGEFIGSYAPYGY 191 Query: 179 SLD-DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHA--------------VK 223 D + + A + D + + ++ IF + + ++ AI +LNDH K Sbjct: 192 IKDPNDKHALLVDHEAAEVVKQIFSMCLSGMTVRAIVNHLNDHGVMCPSVYKQSQGLKYK 251 Query: 224 NFSGKESA-WGPSVIEKLLANKALIGICVPSYRARG------------KGISEIAGYYPR 270 +G+ W I +L N +G K + + Sbjct: 252 CPNGQTQPMWSTITISNMLKNPVYVGDMAQGRNRVKSYKIHKIEAVPEKDWIVVPNTHEP 311 Query: 271 VISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYV 330 +I + F V+++ S K + L ++C CG M S L+ YY Sbjct: 312 IIDREAFEKVKQLLKRDTRTSPKQK---QLYLFSGFLRCADCGRAMS-RIASKELYVYYQ 367 Query: 331 CPMRR---LHRCDRPSIKRDLVDYNIINELLFNC----------SKIQPVENKKDANETL 377 C + C SIK ++ ++ + SKI KK + L Sbjct: 368 CGTYKSLSKKACTMHSIKSTRLEAAVLYAIRQQVHLAVSYSAIVSKINLAPLKKSQSIRL 427 Query: 378 ELKIIELQMKINNLIVALSVA--------PEVTAIAEKIRLLDKE-------LRRASVSL 422 I + ++ ++ +++ + Sbjct: 428 NELITAKEKELTKIMRYKQALYQDWKDGHITHNDYRHMSEDYEQQNEAIGTVIANLKKER 487 Query: 423 KTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKH 482 L++ G+++ + F A +N +L R + + + I + + I F + Sbjct: 488 DELEN-GIDTENPFLATFRKYENIDKLTREILIELVDHIKVY-EGGDISIRFKFADELRR 545 Query: 483 Y 483 Sbjct: 546 I 546 >UniRef50_C9S0X0 Resolvase domain protein n=3 Tax=root RepID=C9S0X0_GEOSY Length = 462 Score = 329 bits (843), Expect = 2e-88, Method: Composition-based stats. Identities = 85/483 (17%), Positives = 162/483 (33%), Gaps = 49/483 (10%) Query: 3 KAIAYMRFSSPGQM-SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 K Y+R S+ Q G S+ QR + + + Y + G SA K Sbjct: 2 KVAIYVRVSTDEQAKEGFSIPAQRERLRAFCASQG--WEIVQEYIEEGWSA---KDLDRP 56 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 L I+ G I +LV LDRL+R V + L+ + + + + + Sbjct: 57 QMQRLLKDIKKGNI---DIVLVYRLDRLTRS-VLDLYLLLQTFEKYNVAFRSATEVYDTS 112 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 + L+A A E E + RVK + ++ G P D Sbjct: 113 T-----AMGRLFITLVAALAQWERENLAERVKFGI----EQMIDEGKKPGGHSPYGYKFD 163 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 + + +I+++ + +IA LN+ VK KE W + + +L Sbjct: 164 KDFNC-TIIEEEADVVRMIYRMYCDGYGYRSIADRLNELMVKPRIAKE--WNHNSVRDIL 220 Query: 242 ANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLIN 301 N IG + + +P +IS+ LF Q+ + + + Sbjct: 221 TNDIYIGTYRWGDKV-------VPNNHPPIISETLFKKAQKEKEKR----GVDRKRVGKF 269 Query: 302 LLRTVMKCEAC-GNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYN--IINELL 358 L +++C C G+ M H YY C + +I L+D +I Sbjct: 270 LFTGLLQCGNCGGHKMQGHFDKREQKTYYRCTKCHRIT-NEKNILEPLLDEIQLLITSKE 328 Query: 359 FNCSKIQPVENKKDANE--TLELKIIELQMKINNLIVAL---SVAPEVTAIAEKIRLLDK 413 + SK ++++ + L ++ +++ + + KI L+K Sbjct: 329 YFMSKFSDRYDQQEVVDVSALTKELEKIKRQKEKWYDLYMDDRNPIPKEELFAKINELNK 388 Query: 414 ELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGREL-------CRTLAYKTFEKIIINTD 466 + L ++ + + ++ + L + FEKI+I + Sbjct: 389 KEEEIYSKLSEVEEDKEPVEEKYNRLSKMIDFKQQFEQANDFTKKELLFSIFEKIVIYRE 448 Query: 467 NKT 469 Sbjct: 449 KGK 451 >UniRef50_D2RBA8 TnpX site-specific recombinase family protein n=1 Tax=Gardnerella vaginalis 409-05 RepID=D2RBA8_GARVA Length = 550 Score = 329 bits (843), Expect = 2e-88, Method: Composition-based stats. Identities = 85/540 (15%), Positives = 182/540 (33%), Gaps = 82/540 (15%) Query: 2 KKAIAYMRFSSPGQMSGDS--LNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 K Y R S ++ GDS + Q+ ++ ++ + N + + + + D G + G + Q Sbjct: 17 KITALYCRLSKDDELQGDSNSIINQKSMLKKYAEDNH--FNNLMFFVDDG---YSGTNFQ 71 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 + + I+ G I T++V+ + RL R+ + + + N I I + + Sbjct: 72 RPDWLKLTALIDEGKIG---TIIVKDMSRLGRDYLQVGMYTEMVFPNADIRFIAINNGVD 128 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 N + + + I ++ S ++K +K K +SG + + P Sbjct: 129 SN-NQSDNDMTPFINI----FNEFYAKDTSRKIKAVFKAK----GQSGKPLCINPPYGYL 179 Query: 180 LD-DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGK---------- 228 D + + ++ D + + IF+L + + IA L + S Sbjct: 180 KDPEDKNHWIVDEEAASVVREIFRLCVNGYGPSQIANELIKRNIPTPSEHFFSLGIKIPS 239 Query: 229 -----ESAWGPSVIEKLLANKALIGICVPSYRAR------------GKGISEIAGYYPRV 271 + W I +L + +G V + + + + Sbjct: 240 AKSEIKGVWNQKTISNMLEKQEYLGHTVNFKTRKKSYKCKKTLLNPKEDWLIFKNTHEAI 299 Query: 272 ISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLH--GYY 329 I + F VQ IR +N + P +L ++ C CGN + G H Y+ Sbjct: 300 IDQETFDIVQRIRNGRRVRTNLGEMP----VLSGMLFCADCGNKLYQVRGKGWSHDKEYF 355 Query: 330 VCPMRR--LHRCDRPSIKRDLVDYNIINELLFNCSKIQPVENK-------------KDAN 374 VC R +C I+ ++ +++EL S + E + Sbjct: 356 VCATYRKQKGKCSSHQIRNIQIEAILLHELRMITSFAKQHEEEFVGLVMKKSEKELTQKL 415 Query: 375 ETLELKIIELQMKINNL--------IVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLK 426 ++ ++ + + +I+ L L DKE +++L+ Sbjct: 416 KSSNRELEQAKARISKLDTIVQHLYEDNLDGKISDERFKSMSESYDKEQAELKSKIESLE 475 Query: 427 SKGVNSFSD------FYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVF 480 + + + F + + +EL + +KI + K ++ Sbjct: 476 AFISKAQEECLNVDSFLKLVRQYTDIQELNAEIIRTFVDKIYVEKSEKVAGTRTKKQTIW 535 >UniRef50_C0B9J7 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0B9J7_9FIRM Length = 557 Score = 328 bits (841), Expect = 3e-88, Method: Composition-based stats. Identities = 96/560 (17%), Positives = 178/560 (31%), Gaps = 79/560 (14%) Query: 4 AIAYMRFSSPG------QMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKH 57 A Y+R S + +S+ QR L+ ++K D Y D G + G + Sbjct: 14 AALYLRLSKDDMEEGGAKSESNSIANQRELLRSFVKSQPD-IQIFDIYVDDG---YSGGN 69 Query: 58 AQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDN 117 F IE G + ++V+ L R RE + K + I++ D Sbjct: 70 FDRPEFKRMTTDIEAGKV---NCVIVKDLSRFGREYIEAGRWIEKTYPALNVRFISVTDQ 126 Query: 118 TVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRW 177 +E + S +V+ K KR+ G + A P Sbjct: 127 FDSKTADFSEKS--FVVPIKNFVNESYCRDISGKVRSHQKIKREK----GEFIGAFAPYG 180 Query: 178 LSLDDK-RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKES------ 230 D + + V D + IF +++ SL AIA+ LN V++ + Sbjct: 181 YCKDPENKNCLVIDSYASDIVRKIFSWKIDGFSLGAIAEKLNVRHVQSPKEYKKANGENY 240 Query: 231 ----------AWGPSVIEKLLANKALIGICVPSYRARG------------KGISEIAGYY 268 W I+++L N+ IG V + R ++ + Sbjct: 241 NSGFHSSDTPKWSAVQIKRILTNEVYIGNMVQGKQERISYKVKQRLDKPESEWVKVENTH 300 Query: 269 PRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVH--AVSGSLH 326 P +I + F VQ++ +SK N + C C MI G Sbjct: 301 PAIIRQNDFDVVQKLLQYD---GRASKTSDSANFFSGFVFCGDCHTPMIRRVNQYKGKKK 357 Query: 327 GYYVCPMRRLHR-CDRPSIKRDLVDYNIINELLFNC----------SKIQPVENKKDANE 375 +Y+C + C R SI +++ ++ E+ ++ ++ D Sbjct: 358 AFYICQTKNKGGDCTRHSIPEEVLKRIVLKEIQAYTALFVDYQMIMEELCEMKVSYDQVI 417 Query: 376 TLELKIIELQMKINNLI--------VALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKS 427 + +I +LQ + N + ++ ++ K Sbjct: 418 GYDTQISKLQEEYNRYYSLKASLGDDLKEGLISKEEFDDFRESYGRKCEELEQMIENQKK 477 Query: 428 KGVN------SFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFK 481 S + S +EL RTL T +KI I + + I+ + + Sbjct: 478 LVKQMFEGGVSATVQLEDWKKSLEIKELDRTLLALTVDKIYIYENKQ-IKIHIRYQDMIE 536 Query: 482 HYPLMKVISAQQAISALKYM 501 +++ A+ K + Sbjct: 537 KMKVIRRFYAEHRTECRKEV 556 >UniRef50_A7VUQ9 Putative uncharacterized protein n=2 Tax=Clostridium leptum DSM 753 RepID=A7VUQ9_9CLOT Length = 514 Score = 328 bits (841), Expect = 4e-88, Method: Composition-based stats. Identities = 90/500 (18%), Positives = 177/500 (35%), Gaps = 56/500 (11%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 + AY R SS +S Q ++++ ++ Y D +S + Sbjct: 18 RVAAYARVSSDSADQLNSFATQVAYYTDFIQSKDEWEF-AGLYADEAVSGTTAD--KRDD 74 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F L G I +LV+S+ R +R + + ++ ++ + G+ V + Sbjct: 75 FQRLLADCRAGKI---DRILVKSISRFARNTL-DCLQTVRELKQLGVAVEFEKEGIDT-- 128 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 S + ++ A EES S +K S++++ + SG +T+ Sbjct: 129 ---GNMGSEMLLSILGSAAQEESLSISKNLKWSYRRRMK----SGDFITSKDLLGYFF-- 179 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 K VP+P V +E IF + + + IA LN +K W ++I +L+ Sbjct: 180 KNNTLVPNPKEVPIVEYIFNSYLSGKGTDEIADELNAANLKTDKKPSGRWHSTMIRYILS 239 Query: 243 NKALIGICVPSYRARGKG-------------ISEIAGYYPRVISDDLFYAVQEIRLAPFG 289 N+ IG + R + I +P +IS + F AVQ++ Sbjct: 240 NEKYIGDSLVQKRYTPEDLPLRQKRNNGELSQYYIQNSHPAIISRETFEAVQQLLNRRRK 299 Query: 290 ISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHR--CDRPSIKRD 347 S LR+ M+C CG+ H +G ++ C + R + C P+I+ Sbjct: 300 RHPPSVEMQQT-PLRSTMQCALCGSYFHKHKSNGE--NFWFCALHRKSKDLCPMPNIREQ 356 Query: 348 LVDYNIINELLFNCSKIQPVENKKDANETLELK-------IIELQMKINNLIVALSVA-- 398 + ++ I + + L+ K I++L KI+ L+ Sbjct: 357 EILMAFLSMYNKLLDNIDILSTMMNQLLELQAKSVCSRPDIMDLNEKISELVTQNHSLSR 416 Query: 399 ------PEVTAIAEKIRLLDKELRRASVSLKTLKS-KGVNSFSDFYAIDLTSKNG----R 447 + E+ +K + L+ + +S + + L G Sbjct: 417 LQAKGCIDSAIFIERSNRNNKLIEELRQELRQRQEPDDTSSAIEGTRLLLDLLEGAKPML 476 Query: 448 ELCRTLAYKTFEKIIINTDN 467 E ++ ++I + + Sbjct: 477 EFDPSVFQSMVKQITVYQEK 496 >UniRef50_Q2YCV5 Recombinase n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YCV5_NITMU Length = 544 Score = 328 bits (841), Expect = 4e-88, Method: Composition-based stats. Identities = 141/502 (28%), Positives = 216/502 (43%), Gaps = 40/502 (7%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYY---LDTITYEDLGLSAFKGKH 57 M+KA +Y+R S+ Q+SGDSL RQR ++ K + LD D+G+S FKG + Sbjct: 1 MRKAYSYIRMSTDKQLSGDSLRRQREASEKYAKAHGLELIETLDGKDLRDIGVSGFKGAN 60 Query: 58 AQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDN 117 ++ G S FL+ + G I + LL+ES DRLSR V +A ILN GI++ITL DN Sbjct: 61 SRRGVLSVFLEHLNDGKIDANSILLIESFDRLSRADVLDAFSLFTNILNKGIEIITLSDN 120 Query: 118 TVYNIDSLN-EPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPR 176 Y DS+ P L I I RANEES KS R W KR +A + +T+ CP Sbjct: 121 QRYTRDSVRVNPGQLFLTIGIMTRANEESVTKSKRGLSVWNNKRDNAQK--KPITSRCPA 178 Query: 177 WLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSV 236 WL+ + F +R + + LIF+L + +I++YLN H + F G W S Sbjct: 179 WLTYSSESEKFEVIEERARVVRLIFELCAKTSGTWSISRYLNRHNIPVF-GDAQFWQKSY 237 Query: 237 IEKLLANKALIGICVPSYRARGKGIS---EIAGYYPRVISDDLFYAVQEIRLAPFGISNS 293 + K+L+N+A++G P+ R G+ I I YYP +IS F+ R + Sbjct: 238 VNKILSNRAVLGEFQPNSRESGQRIPVGKVIENYYPAIISATEFHLAWAARDRRNKTGSG 297 Query: 294 SKNPMLINLLRTVMKCEACGNTMIVHAVS--GSLHGYYVCPMRRLH-RCDRPSIKRDLVD 350 K NL ++ C CG+ M V + VC C+ K LV+ Sbjct: 298 RKGINFSNLFSGLVYCGNCGSKMSVRNRGVPPKGGKWLVCQNHLAGAGCEMREWKLPLVE 357 Query: 351 YNIINELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTA------- 403 I L + K A +E ++ LQ++ L + A E++A Sbjct: 358 DAIFKHLYEV--DFSELLGNKSAGFDIEKELFALQVEQKELESKMDQAIEMSAAQELNEQ 415 Query: 404 ----IAEKIRLLDKELRRASVSLKTLKSKGV--------------NSFSDFYAIDLTSKN 445 + I L+ ++ + + + + + Sbjct: 416 SRFRYVKLINQLESDINEKKKCISSKEKELEVFKSQQSLLHTKELKETLLLLEKNKDDYY 475 Query: 446 GRELCRTLAYKTFEKIIINTDN 467 R L +T +I + TD+ Sbjct: 476 FRSSVNQLLTRTIARIDLITDH 497 >UniRef50_B0TCI3 DNA recombinase, putative n=22 Tax=Bacteria RepID=B0TCI3_HELMI Length = 524 Score = 327 bits (840), Expect = 4e-88, Method: Composition-based stats. Identities = 90/511 (17%), Positives = 185/511 (36%), Gaps = 57/511 (11%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 + AY R S+ + S Q +++ N ++ L + D G++ K + Sbjct: 29 RVAAYCRVSTDNEEQASSYEVQIEHYTRYIQSNPEWEL-AGIFADEGITGTNTK--KRAE 85 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F+ ++ G I ++ +S+ R +R + + ++ ++ + + GI V +N I Sbjct: 86 FNRMIEECMAGRI---DMVITKSISRFARNTL-DCLKYIRQLKDKGIPVFFEKEN----I 137 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 ++++ ++ I+ A A +ES+ S V++ + Q +G I D Sbjct: 138 NTMDSKGEILLTIM-ASLAQQESQSLSQNVRMGIAFRFQ----NGEIQVNHNRFLGYTKD 192 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 + V P+ + ++ I++ +E SL I + L + +GK W P I K+L Sbjct: 193 ENKRLVIVPEEAEIVKRIYREFLEGASLLQIGRGLEADGILTAAGKP-KWRPETIRKILK 251 Query: 243 NKALIG----------ICVPSYRARGKGISE---IAGYYPRVISDDLFYAVQEIRLAPFG 289 N+ IG + R GI + + +I +LF VQE Sbjct: 252 NEKYIGDALLQKTYTVDFLSKKRVINNGIVPQYYVENSHEPIIPRELFLQVQEELARRAN 311 Query: 290 ISNSSKNPML----INLLRTVMKCEACGNTMIVH--AVSGSLHGYYVCPMR---RLHRCD 340 + + K L +++ C CG G + C R + C Sbjct: 312 LRSGEKGGKRVYSSKYALSSIVFCGECGEIYRRVHWNNRGKKSIVWRCVSRLEEKGSDCG 371 Query: 341 RPSIKRDLVDYNIINEL-------------LFNCSKIQPVENKKDANETLELKIIELQMK 387 P++ + + ++ + L + ++ E ++ K+ ELQ + Sbjct: 372 SPTVSEEDLQKAVLKAINSIIAGRDEFIETLRRNIETALGGEFDESTEAIDKKLEELQHE 431 Query: 388 INNLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGR 447 + L + V ++R L +E ++ ++K ++ S Sbjct: 432 LLRLASTKAAYDSVANEIYRLRELRQETLASNSE---RQNKRQRIAEMMDFLESQSGVIF 488 Query: 448 ELCRTLAYKTFEKIIINTDNKTCDIYFMNGI 478 E L EK+ + + F GI Sbjct: 489 EYDEKLVRWLVEKVTVF--EGGIVVKFKTGI 517 >UniRef50_A9BFJ9 Resolvase domain n=14 Tax=Bacteria RepID=A9BFJ9_PETMO Length = 522 Score = 327 bits (840), Expect = 4e-88, Method: Composition-based stats. Identities = 88/506 (17%), Positives = 186/506 (36%), Gaps = 55/506 (10%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 + AY R S+ + S Q ++K N ++ L + D G++ K + Sbjct: 28 RVAAYCRVSTDSEEQATSYEAQIEHYTNYIKSNPEWEL-AGIFADEGITGTNTK--KREE 84 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F+ ++ G I ++ +S+ R +R + + ++ ++ + I V +N I Sbjct: 85 FNRMIEECMQGKI---DMIITKSISRFARNTL-DCLKYIRQLKEKNIPVYFEKEN----I 136 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 ++L+ ++ I+ A A +ES+ S VKL + + Q + + + D Sbjct: 137 NTLDSKGEILLTIM-ASLAQQESQSLSQNVKLGIQYRYQQGK---IHINHNRFLGYTKDK 192 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 V P+ + ++ I++ +E S+ IA+ L + +G W S I K+L Sbjct: 193 DGN-LVIVPEEAEIVKRIYREYLEGSSMLQIARGLEADGILTGAG-NPRWHTSTINKILR 250 Query: 243 NKALIG----------ICVPSYRARGKGISE---IAGYYPRVISDDLFYAVQEIRLAPF- 288 N+ IG + R GI + + +I ++F VQE + Sbjct: 251 NEKYIGDALLQKTYTVDFLSKKRVANNGIVPQYYVENSHEPIIPREIFMQVQEQLVKRRC 310 Query: 289 ---GISNSSKNPMLINLLRTVMKCEACGNTMIVH--AVSGSLHGYYVCPMRRLHR---CD 340 + +N + L ++ C C G + C R + C Sbjct: 311 VHISKNGKKRNYSNNHPLSQMVFCGKCHEIFRRVHWNNRGKKSIVWRCVSRLENTGLFCT 370 Query: 341 RPSIKRDLVDYNIIN-------------ELLFNCSKIQPVENKKDANETLELKIIELQMK 387 +I D + I++ +L + E+ ++ ++ ++ ELQ + Sbjct: 371 ASTILEDTLKEKIVDAINVAVSGKNSFLAILKKNIETVLSEDLDESTADIDKRLEELQTE 430 Query: 388 INNLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGR 447 + + + ++R L +E + +L+ K + +DF +++ + Sbjct: 431 LIQKANSKEAYDNIVNEIYRLRDLRQE-TLSRNALRQDKRDRIAEMTDF--LNMQTGGIT 487 Query: 448 ELCRTLAYKTFEKIIINTDNKTCDIY 473 E L K EK + D + Sbjct: 488 EFDDKLVRKLIEKATVYNDRLVVEFK 513 >UniRef50_A4X6D7 Resolvase, N-terminal domain n=1 Tax=Salinispora tropica CNB-440 RepID=A4X6D7_SALTO Length = 546 Score = 327 bits (838), Expect = 7e-88, Method: Composition-based stats. Identities = 84/449 (18%), Positives = 149/449 (33%), Gaps = 49/449 (10%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 M + Y R S+ + ++ Q + + ++ + + T + D G Sbjct: 20 MLRVAIYTRRSTDDEHQPYTIEAQTQKLTAYVDSQPGWQI-TARFTDDA----SGATLDR 74 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 ++ L A G LLV LDR SR ++ + + + G+ + + Sbjct: 75 PGLTKALAAARAGR---FDLLLVYRLDRFSR-RIRDLATLMDDLDAAGVHFRSATEPFDT 130 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 + P + ++ A E E+ RV ++K G P + Sbjct: 131 S-----SPAGRLFVQMLGAFAEFEREVIIDRVINGMERKAAK----GEWTHGPRPYGYLV 181 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRM-ERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEK 239 D VP PD ++ IF L R AIA LN+H + +GK W I + Sbjct: 182 DPDTHRLVPHPDEQHIVKEIFDLYAGTRLGTRAIAAKLNEHGKRTRAGKP--WSGHTIGR 239 Query: 240 LLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPML 299 +L N+ +G G +P ++ +DLF Q I A + Sbjct: 240 MLGNRLYLGEV-------GFRDVTAEYAHPPLVDEDLFNQCQAILEARGEAHSQRAAANS 292 Query: 300 INLLRTVMKCEACGNTMIVHAVSGS--LHGYYVCPMRRLH---RCDRPSIKRDLVDYNII 354 L + C CG + + +G + YY C R + CD I DL+D + Sbjct: 293 DYDLTGRITCPKCGCKYVGTSATGKLRRYRYYTCFTRARYGSSGCDAARIDADLLDGTVA 352 Query: 355 NELLFNCSKIQPVENKKDANETLEL---------------KIIELQMKINNLIVALSVAP 399 L+ K + A TL +I + ++ + A Sbjct: 353 EGLIDFFRKPDLIIEAVAAERTLRADGADRHQAELDAIAGQISTAEAAVDRYLTAFENGT 412 Query: 400 EVTAI-AEKIRLLDKELRRASVSLKTLKS 427 +++ L ++L + L Sbjct: 413 LDERTCGHRVQDLTRKLDQLRARQDELHQ 441 >UniRef50_C6LJ39 TnpX site-specific recombinase n=3 Tax=Clostridiales RepID=C6LJ39_9FIRM Length = 742 Score = 327 bits (838), Expect = 9e-88, Method: Composition-based stats. Identities = 86/551 (15%), Positives = 172/551 (31%), Gaps = 99/551 (17%) Query: 4 AIAYMRFSSPG--QMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 Y R S S+ Q+ ++ +++K + TY D G + G + Q Sbjct: 13 VGIYCRLSKDDGTDNESASIATQKSILTDYVKKQGWHL--AKTYVDDG---YSGTNFQRP 67 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 +F + IE+G I ++ + L RL R + + H + I + D Sbjct: 68 SFQNMIKDIENGQI---NCVITKDLSRLGRNYLDCGLYLEVFFPEHNVRYIAINDGVD-T 123 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 ++ + + IL S S ++K +++ + Q G M P D Sbjct: 124 LNKSAMDITPFRNILN----EMYSADVSVKIKSAYRARFQQ----GKFMGTYAPYGYVKD 175 Query: 182 D-KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGK------------ 228 + D + IF L + L I K++N V + Sbjct: 176 PADHNHLLIDDKVAHVVREIFDLALAGNGLGKIRKHINSQHVLRPAAYAAEQGATGYERY 235 Query: 229 -------ESAWGPSVIEKLLANKALIGICVPSYR------------ARGKGISEIAGYYP 269 W + + +L + G R + I + Sbjct: 236 FEDNEENRYIWSENSLRNILRSPIYAGNLAGYKRIAANMKSKKRPSKLPEEWEVIPNTHE 295 Query: 270 RVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHG-- 327 +++ + F VQ++ + N N+ V+KC CG + + + Sbjct: 296 GIVTQEEFDTVQQLMTSRRREKNKG---DFENIFAGVIKCADCGYALRAMSANRRKRPDI 352 Query: 328 ----YYVCPMRRLHR---CDRPSIKRDLVDYNIINELLFNCS------------KIQPVE 368 Y C + C +I+ + +++++ + + E Sbjct: 353 IDCVQYTCNNYGRYGNVMCTAHAIEARDLFNAVLDDINRFADMAVNDERAVRAIEKRLTE 412 Query: 369 NKKDANETLELKIIELQMKINNLIVALSVAPEVTAIAEKIRL---------LDKELRRAS 419 + +T+E + +L ++ L S E + E+I KE Sbjct: 413 TDQSKAKTMEKERKKLNKRLAELDRLFSSLYE-DKVMERITERNFEMMSGKYQKEQLEIE 471 Query: 420 VSLKTLKSKGVNSFS------DFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNK----- 468 LK + S+ DF ++ + +EL T+ +KI+++ K Sbjct: 472 ARLKEVTETLNESYEKSQGIRDFLSLIRNYQGLKELDATVVNALIDKILVSEREKSADGT 531 Query: 469 ---TCDIYFMN 476 IY+ Sbjct: 532 VKQEIKIYYKF 542 >UniRef50_A5ZMY9 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5ZMY9_9FIRM Length = 530 Score = 326 bits (837), Expect = 9e-88, Method: Composition-based stats. Identities = 95/549 (17%), Positives = 178/549 (32%), Gaps = 85/549 (15%) Query: 1 MKKAIAYMRFSSPGQMS--GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHA 58 M + Y R S + +S+ Q +LI E++ S+ Y D G S + Sbjct: 2 MYQMGVYCRLSKDDGENKVSESIENQMKLIREYVTK-SEDLEIADIYIDDGYSGLYFAN- 59 Query: 59 QSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNT 118 F ++ I G I ++ + + RL RE + + ++ + G+ I + D Sbjct: 60 -RPEFQRMMEDIYKGKIQG---VITKDISRLGREHIETSNYIERVFPSLGVRYIAILDGV 115 Query: 119 VYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWL 178 S E A + S S +++ + +++ G M+ P Sbjct: 116 DSVHHSNEE-----LAQFKTLFNDMYSRDISKKIRGALTAQKKR----GQFMSGFAPYGY 166 Query: 179 SLDD-KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESA------ 231 D + F+ D + K + IF + +E S + IAK LN + S + Sbjct: 167 VKDPADKHHFLVDEEAAKVVRRIFYMSLEGYSRDGIAKKLNQEGILTPSEYKRKVQGLKY 226 Query: 232 -----------WGPSVIEKLLANKALIGICVPSYRARGKGISE------------IAGYY 268 W I +L N+ G V + E + G + Sbjct: 227 ANALEKAGAKGWAYPTINVILRNRVYTGAMVQHKSEKISYKVEKYQYIPEEQQYIVEGMH 286 Query: 269 PRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGY 328 +IS D F VQE+ + +N ++ C CG Sbjct: 287 EAIISKDTFEQVQELMKKRTRTPGFNSEVRKVNPYAGIIVCGDCGYNFQRVTCRDG---- 342 Query: 329 YVCPMRRLHR---CDRPSIKRDLVDYNIINELLFNCS------KIQPVENKKDANETLEL 379 Y C C IK++++D + NE+ + D + ++ Sbjct: 343 YECGTYHKKGNTVCYSHFIKKEVLDSIVKNEIQRQAELALKESDKDEILKVADRKKEVQR 402 Query: 380 KIIELQMKINNLIVALSVAP---------------EVTAIAEKIRLLDKELRRASVSLKT 424 + E +I L L+ + +K+ + ++ Sbjct: 403 RCAEADQQIERLQKELAAVQKYKKKTYENYVDGVLDKEEYLSYKAEYEKQDKDIRAKIQL 462 Query: 425 LKSKG------VNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGI 478 + + S+ ++ + E+ R + + EKI++N D K+ DI F Sbjct: 463 AEQEKDSFGEAEESYENWIEKFIKYGTLSEVTREIVTELIEKIVVNGD-KSIDIVFKYQS 521 Query: 479 VFKHYPLMK 487 YP+ K Sbjct: 522 P---YPVEK 527 >UniRef50_B8ENV0 Resolvase domain protein n=1 Tax=Methylocella silvestris BL2 RepID=B8ENV0_METSB Length = 561 Score = 326 bits (837), Expect = 1e-87, Method: Composition-based stats. Identities = 78/520 (15%), Positives = 168/520 (32%), Gaps = 70/520 (13%) Query: 2 KKAIAYMRFSSPGQMSGD-SLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 K+A Y+R S+ Q D S+ QRR + + + + G S + Sbjct: 15 KRAALYLRVSTGRQAEADLSIPDQRRQAVAFCAARG--WQVAAEFVEPGASGT---DDRR 69 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 L + G P ++V S R +R+ ++ + G+ +I++ Sbjct: 70 PELQRLL-DLATGGGTPFDVVIVHSFSRFARDHF-ALEYHVRSLRKAGVRLISITQ---- 123 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 D ++P S++ + A +S+ + + ++ + +G + P S+ Sbjct: 124 --DLGDDPMSVMVRQVFALFDEYQSKENAKHTLRAMQENARQGFWNG----SKAPFGYSV 177 Query: 181 DD-------KRTAFVPDPDRVKTIELIFKLRMER------RSLNAIAKYLNDHAVKNFSG 227 D + DP +T+ L+F+L + A+ +LN+H + G Sbjct: 178 VDAEQRGSKTKKRLAIDPVEAETVRLMFRLFQRGDGTNGPMGVKAVTSWLNEHGYRTRVG 237 Query: 228 KESAWGPSVIEKLLANKALIGICVPSYRARGKGISEIA-----GYYPRVISDDLFYAVQE 282 + WG + ++L G + + ++ +I F AVQ Sbjct: 238 --ARWGIGPLHQILTRPTYKGEHRFNRKVWKTKEAKPESEQIAVPVDPIIDAATFDAVQA 295 Query: 283 IRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPM---RRLHRC 339 + + + + LL + C +CG M + + YY C + C Sbjct: 296 MLKSKNPRAMPPRVVTGPILLTGIATCASCGGGMTLRTGKYGRYRYYTCATCAQKGKSAC 355 Query: 340 DRPSIKRDLVDYNIINELLFNC---------------SKIQPVENKKDANETLELKIIEL 384 SI D +D + L + E+ L K+ + Sbjct: 356 KGRSIPMDKLDKLVTERLAEQLLTPERIGKILAGIMERQASKDEDYSGRLTALRAKLADA 415 Query: 385 QMKINNLIVALSVAPEVT---AIAEKIRLLDKELRRASVSLK----------TLKSKGVN 431 Q ++ L A+ + E++ + E A V+ + + Sbjct: 416 QGRLGRLYAAIENGIADPMDATLKERVATVKTERDIAQVAFDRAVAEMRPDVRITEDKIA 475 Query: 432 SFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCD 471 +F++ ++ R +++ ++ Sbjct: 476 AFTEVMRANVLKGETP-FRRAYIRSVIDQVEVDDTEIRIH 514 >UniRef50_UPI0001692EF6 hypothetical protein Plarl_21271 n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001692EF6 Length = 475 Score = 326 bits (837), Expect = 1e-87, Method: Composition-based stats. Identities = 89/506 (17%), Positives = 185/506 (36%), Gaps = 68/506 (13%) Query: 3 KAIAYMRFSSPGQMS-GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 + Y+R S+ Q G S++ Q+ + + + D Y D G + G Sbjct: 2 RVAIYIRVSTEEQAQYGYSIDAQKERLIAYCTSQG--WTDYKIYIDDG---YTGTKMMRP 56 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 A + + IE I ++V LDRLSR+++ ++ H + + + Sbjct: 57 ALNRLIRHIEDDKI---DLVVVYKLDRLSRKQLDVLYLLEEVFEKHNVGFKSATEPFETT 113 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 P+ ++A A E ++ R + R+ + G P ++ Sbjct: 114 T-----PFGKAMIGILAVFAQLERDMIVERTTIG----RRQRVSKGEWYGGRIPFGYRMN 164 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 + P+ K I+ I+K+ ++ S +IA++ + K SVI +L Sbjct: 165 RETKQLEIVPEEAKIIKEIYKMYLQGNSRLSIAEWAAE------RTKARVIDHSVIRDIL 218 Query: 242 ANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLIN 301 + G + + G + +I + ++AVQ+ + P+ Sbjct: 219 SRPVYTGKL-------SNAGNVVDGKHEAIIDEKTWHAVQKETQERKEGA----TPLGEY 267 Query: 302 LLRTVMKCEACGNTMI----VHAVSGSLHGY--YVCPMR------RLHRCDRPSIKRDLV 349 LL ++KC CG ++ + G + Y Y C + R + C I+R+ V Sbjct: 268 LLTGLLKCGVCGGPIVHVKRITRKYGKEYLYELYACKNQHVRKKDRNNNCSLGYIRREKV 327 Query: 350 DYNIINELLFNC-----------SKIQPVENKKDANETLELKIIELQMKINNLIVALSVA 398 + +I ++ K + EN + A LE ++ ++ + NL A+ Sbjct: 328 EKFVIEQIKSYTTDDVLIKQITNEKNKFKENDESALNNLESQLKKVLTGLENLYDAIESG 387 Query: 399 -PEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRE--------L 449 + ++I+++IR L+++ + +K + + ++ K E Sbjct: 388 EIKASSISDRIRKLEEQRDVLENHIDEIKDNTPQNELNIQEFNIFIKEIGEAWDYLTEDE 447 Query: 450 CRTLAYKTFEKIIINTD-NKTCDIYF 474 + L K F + + D + F Sbjct: 448 QKALIRKAFRSVTLYKDKEIKVEWNF 473 >UniRef50_D0LPM7 Resolvase domain protein n=2 Tax=Haliangium ochraceum DSM 14365 RepID=D0LPM7_HALO1 Length = 525 Score = 325 bits (835), Expect = 2e-87, Method: Composition-based stats. Identities = 83/519 (15%), Positives = 167/519 (32%), Gaps = 68/519 (13%) Query: 2 KKAIAYMRFSSPG--QMSGDSLNRQRRLIAEWL--KVNSDYYLDTITYEDLGLSAFKGKH 57 K+ Y R S+ + ++L+ QR ++ + + + Y+D G F G + Sbjct: 9 KRCAIYTRKSTEEGLEQEFNTLDAQRDAGEAYIASQQHEGWVCLPERYDDGG---FSGAN 65 Query: 58 AQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDN 117 + A L IE G + +++ +DRLSR + A + +++ H + +++ Sbjct: 66 TERPALQRLLADIERGRV---DAVVIYKVDRLSRSLLDFA-KLMEVFDRHEVAFVSVTQQ 121 Query: 118 TVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRW 177 ++ LI +L+ A E E+ + R + R+ SG P Sbjct: 122 F----NTATSMGRLILNVLL-SFAQFEREMIAERTRDKIAAARKKGRWSG----GMPPLG 172 Query: 178 LSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESA------ 231 + V + + IF+L + +SL A+ LN + Sbjct: 173 YEVAPGGGKLVVHAEEAAQVREIFRLYVREQSLLTTAQELNRRGWRTKQWTTKKGRRRGG 232 Query: 232 --WGPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFG 289 W S + ++L + +G A G + +I F + + Sbjct: 233 VLWDKSRVHRILTSVVYLGQVTYKGTAY-------DGVHEPLIDAATFERARTLLEEGRV 285 Query: 290 ISNSSKNPMLINLLRTVMKCEACGNTM--IVHAVSGSLHGYYVC---PMRRLHRCDRPSI 344 +S+ LLR +++C AC M G ++ YY C C +I Sbjct: 286 AGSSALRNRHGFLLRGMLRCGACATGMSASWTTRRGKVYRYYRCDSTVRHGTGACPVGAI 345 Query: 345 KRDLVDYNIINELLFNCSKIQPVENKKDANETL-----------ELKI----IELQMKIN 389 + ++ I+ + + + +E E +I + + Sbjct: 346 SAEAIEQFIVARVRDAATAPEVIEQALAQVAEDRAARRDALAREEQQIGAAYRRCREEAG 405 Query: 390 NLIVALSV---------APEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAID 440 NL+ AL+ + + + L L L+ V A+ Sbjct: 406 NLLDALAQPGASGGRFAPERLGELETQAAQLQARRAEVCGELAALQGADVGKQEVRAALA 465 Query: 441 LTSKN----GRELCRTLAYKTFEKIIINTDNKTCDIYFM 475 L G + E++ + + F Sbjct: 466 LFEPVWDVLGATERARIVRLLLEEVRYDGAGGEVTLSFY 504 >UniRef50_C2RWE8 Cassette chromosome recombinase B n=1 Tax=Bacillus cereus BDRD-ST24 RepID=C2RWE8_BACCE Length = 561 Score = 325 bits (834), Expect = 2e-87, Method: Composition-based stats. Identities = 89/544 (16%), Positives = 186/544 (34%), Gaps = 69/544 (12%) Query: 2 KKAIAYMRFSSPGQMS-GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 K+ Y R S+ Q G S++ Q RL+ ++ + Y+ Y D G+S K Sbjct: 22 KRVAIYARVSTTEQAEEGYSIDEQIRLLHQYCEREG--YVVHKEYADRGISGKSIKG--R 77 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 A + LD +LV +RL+R + + ++ + + I + + Sbjct: 78 AALQQLLDDAREKL---FDIVLVWKSNRLARN-ILDMLKIVDFLKQRSITFRSYSEQYET 133 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 + ++ ++A A E + + VK+ + ++ +G + + Sbjct: 134 ETST-----GKLQFNMMAVIAEFERDNIAENVKMGMLARAREGSWNGGQVLGYDTKKFQS 188 Query: 181 DDKRTA---FVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVI 237 ++++ V + T+ IF+L E +IA N ++ G + + + I Sbjct: 189 ENRKGVITGLVVNEMEAATVRRIFELYTEGHGYKSIANRANKEGHRSKKG--NLFSINAI 246 Query: 238 EKLLANKALIGICVPSYRAR---------GKGISEIAGYYPRVISDDLFYAVQEIRLAPF 288 + ++ N IG + R G + +I+++ + Q I Sbjct: 247 KTIITNPIYIGYIRYNVRRNWNEKRRNNINPDPIVQKGQHEPIITEETWKKAQSILKNRS 306 Query: 289 GISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLH-------GYYVCPMRRLHR--- 338 N S + L ++KC CG M++ + YYVC + Sbjct: 307 KTPNRSHSGG--FPLTGIIKCPVCGAGMVLGRTTNKRKDGSKRVLEYYVCGKWKNKGSSA 364 Query: 339 CDRPSIKRDLVDYNIINEL---------------LFNCSKIQPVENKKDANETLELKIIE 383 C I+ + D ++N++ N S E + L+ + Sbjct: 365 CRSNGIRTEYADDYVLNKIAKFANSNTLIKDVVKRINNSYRLTSEPLQKEYTVLKNSLEA 424 Query: 384 LQMKINNLIVALSVAP-EVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLT 442 +Q K + ++V + ++ LD+E + + + L+ + + Sbjct: 425 IQSKKDRILVLYEDGILNKVDLKNRLIKLDEEKKLLNERIAPLEQQLGQGTKKELTFQMV 484 Query: 443 SKNGR------------ELCRTLAYKTFEKIIINTDNKTCDIYFM-NGIVFKHYPLMKVI 489 K + E + L + KI I + I N V KH+ + Sbjct: 485 KKVMQSFTESYKRSITSEQRKQLLHLLINKITIADNRNIESIQIQLNNEVVKHFSKEEDK 544 Query: 490 SAQQ 493 S+ + Sbjct: 545 SSGE 548 >UniRef50_UPI00016C43FD Resolvase, N-terminal domain n=2 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C43FD Length = 535 Score = 325 bits (833), Expect = 3e-87, Method: Composition-based stats. Identities = 81/516 (15%), Positives = 170/516 (32%), Gaps = 66/516 (12%) Query: 3 KAIAYMRFSSPG--QMSGDSLNRQRRLIAEWLKVN--SDYYLDTITYEDLGLSAFKGKHA 58 + Y R S+ + +SL+ QR +++ + L Y+D G + G + Sbjct: 22 RCAIYTRKSTEEGLEQEFNSLDAQREAGEAFVRSQAGEGWVLMPERYDDGG---YTGGNT 78 Query: 59 QSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNT 118 + + I+ G + ++V +DRLSR + A + ++ + +++ Sbjct: 79 DRPGLQKLMAHIDEGRV---DCVVVYKVDRLSRSLLDFA-QLMRTFEQQQVAFVSVTQQF 134 Query: 119 VYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWL 178 ++ L+ +L+ A E EI S R + R+ G Sbjct: 135 ----NTATSMGRLVLNVLL-SFAQFEREIISERTRDKIAATRRK----GKWAGGHPVLGY 185 Query: 179 SLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKN--------FSGKES 230 +D V +P + + IF L +E RSL +A L Sbjct: 186 DIDPAGYKLVVNPAEAERVRAIFALYLEHRSLLPVADELATRGWTTKQWTTRKGPERGGK 245 Query: 231 AWGPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGI 290 + + + LL N IG G +P V+ +F+ VQE Sbjct: 246 RFDRTNLYNLLTNPLYIGKVRYKDEVH-------DGEHPAVVDPGVFHQVQEALRRNGRT 298 Query: 291 SNSSKNPMLINLLRTVMKCEACGNTMI-VHAVSG-SLHGYYVC---PMRRLHRCDRPSIK 345 + +L+ +++C CG M H+ G + YY C R C S+ Sbjct: 299 GGAHVRNQFGAVLKGLLRCAPCGAAMTPTHSTKGAKRYRYYACVAGQKRGARTCPSRSVP 358 Query: 346 RDLVDYNIINELLFNCSKIQPVEN---------------KKDANETLELKIIELQMKINN 390 + V+ +++++ + + + L+ + ++ N Sbjct: 359 AEPVETFVVDKIRAVGRDPELLRQVLDRARDAGAARAAELEAERAGLDKDLRGWHAEVRN 418 Query: 391 LIVALSVAPE-------VTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTS 443 L V L + + + E+I ++ + + +K + ++ V A+ Sbjct: 419 LSVPLRPGEDNGPLVARLADLHERIGTVEGRVTKVRDQIKAVAAQLVPEEQAARALAAFD 478 Query: 444 KNGRELC----RTLAYKTFEKIIINTDNKTCDIYFM 475 L + + + + + + F Sbjct: 479 PVWDALTPLERARVIALLVQTVEYDGRDGRVTVSFH 514 >UniRef50_C4ZEQ6 Cassette chromosome recombinase B n=35 Tax=Bacteria RepID=C4ZEQ6_EUBR3 Length = 556 Score = 324 bits (831), Expect = 5e-87, Method: Composition-based stats. Identities = 85/557 (15%), Positives = 166/557 (29%), Gaps = 90/557 (16%) Query: 3 KAIAYMRFSSPGQMSGDS--LNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 +A Y R S + G+S + QR ++ ++ + + Y+D G F G + + Sbjct: 21 RAAVYCRLSKDDDLQGESASIANQRDMLEKYCEKQG--WEVVAVYQDDG---FTGLNMER 75 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 L AIE I ++ + L RL R + +G+ I + D Sbjct: 76 PDLQRMLRAIERRQI---NLVITKDLSRLGRNYLQTGHLIEDFFPRNGVRYIAMNDGIDT 132 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 D N + K IL S+ S +V S+ K Q G P Sbjct: 133 LRD--NNDIAPFKNILN----EMYSKDISKKVHSSYLLKAQK----GQFTGCLAPFGYRK 182 Query: 181 D-DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFS------------- 226 D + + + D + + LIF + N I + L + + + Sbjct: 183 DPEDKNHLLIDEETAPIVRLIFGYALNGHGPNYIRRRLEEEKIPCPTWWNRERGLRNTRT 242 Query: 227 --------GKESAWGPSVIEKLLANKALIGICVPSYR-----------ARGKGISEIAGY 267 W SVI+ LL N G + + + + G Sbjct: 243 KWEKKDPEKGRYMWDFSVIKDLLMNPVYTGAIASQKKDYRFKIGTIGEKKPEDWIVVEGQ 302 Query: 268 YPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVS-GSLH 326 + +I F VQ + I+L ++KC CG ++ + + Sbjct: 303 HEPLIDRMSFDIVQNKLKSRQRPG----QTNEISLFAGLIKCGECGKSLTIRYTNAKHPQ 358 Query: 327 GYYVCPMRR---LHRCDRPSIKRDLVDYNIINELLFNCSKIQP-------------VENK 370 Y C + C + I D + +++ ++ + Sbjct: 359 QIYSCKTYNAFGKNHCTQHRIDYDTLCSHVLRKIRECARAALMDGEAVADRLTNTCEAEQ 418 Query: 371 KDANETLELKIIELQMKINNL--------IVALSVAPEVTAIAEKIRLLDKELRRASVSL 422 ++ E +E + + +I L ++ + E + Sbjct: 419 REQREAMERSLTRDEERIEVLDKMVMRLYEDMIAGRISEQNFNTMLEKTQTEQTELKAKV 478 Query: 423 KT------LKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMN 476 + + N + N EL + ++I+++ + D Sbjct: 479 SEGRKRLSDEVQLANDAKQWVEAIQEYANITELDAATLNRLIKEIVVH-ERIDEDKTRHI 537 Query: 477 GIVFKHYPLMKVISAQQ 493 I H+ L + +Q Sbjct: 538 SIEI-HFNLKPIPEVEQ 553 >UniRef50_UPI0001C37799 recombinase n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37799 Length = 517 Score = 324 bits (830), Expect = 7e-87, Method: Composition-based stats. Identities = 92/502 (18%), Positives = 176/502 (35%), Gaps = 58/502 (11%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 + Y RFSS Q + +S++ Q R + ++ K + TY D SA Sbjct: 7 RVAQYARFSSDNQRT-ESIDAQLRAMNQFCKQQH--WQVVATYTDEARSATTD---NRPQ 60 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F + + G +LV LDR SR++ AI + K + + + + ++ + Sbjct: 61 FQQMIADSGKG---IFDIVLVHKLDRFSRDRYDSAIYK-KRLKKNNVQLCSVLERID--- 113 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 + P S++ ++ A S V K+ +G P + + Sbjct: 114 ---DSPESIMMESVLEGMAEYYSRNLGREVMKGMKETALQCKHTG----GCPPLGYDVGE 166 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 R V + + ++ IF++ E +AIA YLN+H G + + + ++L Sbjct: 167 DRK-LVVNQHEAEAVKAIFEMFAEGYGYSAIADYLNEHGYTTKRGH--IFAKNSLYEILK 223 Query: 243 NKALIGICVPSY-------------RARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFG 289 N+ G+ V + I + G P +IS LF VQ I+ A Sbjct: 224 NEKYTGVFVFNRAAAKSDSKRNNHAYKTSDNIIRVPGGCPAIISKHLFEKVQRIKAANRR 283 Query: 290 ISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRR---LHRCDRPSIKR 346 + + LL + C CG + + +C R C + Sbjct: 284 -NTGRYHSKEFYLLTGKVFCGVCGKRIQGNLRFSGERKNRLCTYRCDEPKQICKNKENNK 342 Query: 347 DLVDYNIINELLFNCSKIQPVENK---------------KDANETLELKIIELQMKINNL 391 D +D + + L + + + E+++ ++ E+ + ++N+ Sbjct: 343 DYLDAYVADLLRQKIFNKAALRRRINAVNKYIESYNAEFDEHYESIKTELDEVTVALSNI 402 Query: 392 IVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKN---GRE 448 VA+ AI E+ L++ L L+ D+ + KN E Sbjct: 403 TVAVEKGVLTDAIIERSEALEQRKSEIQAQLAELRRFEPLRLEDYLHLIDDYKNMQRNTE 462 Query: 449 LCRTLAYKTFEKIIINTDNKTC 470 RT +K++ + Sbjct: 463 EFRTFVQTYIDKVVTYPYHIEI 484 >UniRef50_B0P747 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B0P747_9FIRM Length = 511 Score = 323 bits (829), Expect = 8e-87, Method: Composition-based stats. Identities = 85/534 (15%), Positives = 156/534 (29%), Gaps = 84/534 (15%) Query: 3 KAIAYMRFSSPGQM---SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 K Y R S +S+ QR L+ E+ + Y D + G Sbjct: 2 KCAVYCRLSREDGDGTRESESIQNQRALLTEYAAERG--WEVYAAYCDDD---YSGADRA 56 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 AF+ L +L ++ R +R+ L GI I + D+ Sbjct: 57 RPAFNRMLRDARDQKFE---IILCKTQSRFTRDLELVEKYIHGLFPVWGIRFIAVVDHVD 113 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 + + + E S ++ + +KR+ G + + Sbjct: 114 TALRGSKKA-----RQINGLVNEWYLEDLSENIRAVFAQKRRA----GQYIGSFPAYGYE 164 Query: 180 LDD-KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFS------------ 226 D V D +T+ LIF L + IA LN + N + Sbjct: 165 KDPADHNHLVIDAQAAETVRLIFSLCLSGMGKQKIAAELNRRGILNPTAYKRARGWICPG 224 Query: 227 GKESAWGPSVIEKLLANKALIGICVPSYRAR------------GKGISEIAGYYPRVISD 274 GK + W + + ++L N+ G V + + + + G + +I Sbjct: 225 GKSALWSHATVGRILHNELYTGTMVQGVKHKISYKSNLCVSVPREAWIRVPGTHEAIIDP 284 Query: 275 DLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIV--HAVSGSLHGYYVCP 332 +F VQ + S + + L +++C ACG +MI H G Y C Sbjct: 285 QVFQTVQSVLARRTRSDGSGQT----HPLAGLVRCGACGASMIRVSHTYKGKKRSYLQCG 340 Query: 333 MRRLHR----CDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANET------------ 376 R C R SI+ D++ + EL ++ + Sbjct: 341 RYASDRAGALCTRHSIRLDILTDAVKRELREQIARWYTPGSSIRDLPQKPRAAAASGQLA 400 Query: 377 -LELKIIELQMKINNLIVALSVAPEVTA--------IAEKIRLLDKELRRASVSLKTLKS 427 L ++ + + L + + + L L Sbjct: 401 ALRTQLARREAALRTLYLDRADGTVTPEQFAALGASFQAEADTLRAHLAALEAQAAQAHD 460 Query: 428 KGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINT-----DNKTCDIYFMN 476 + L + R LA ++I I+ D + I++ Sbjct: 461 APPACTAQHIRELL---SPGRFFRPLATLLIDRIEIDERDPLQDTQAVRIFWKF 511 >UniRef50_A5Z6W7 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5Z6W7_9FIRM Length = 549 Score = 323 bits (828), Expect = 1e-86, Method: Composition-based stats. Identities = 90/541 (16%), Positives = 171/541 (31%), Gaps = 68/541 (12%) Query: 4 AIAYMRFSSPGQMS-GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 Y+R S G S+ Q+ ++ ++L D ++ TY D G G + Sbjct: 22 VALYIRLSVEDNKKRGCSVENQKLVLNDFLSDKPD-FVVYDTYIDNGA---TGTNFHRPG 77 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F + L IE G+I ++V+ L RL R + + H + I + D Sbjct: 78 FQQMLSDIEAGHI---NCVIVKDLSRLGRNSIDTGYYIEQYFHAHNVRFIAVTDQFDT-- 132 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 + + I L + ++K + + A++ G + A P D Sbjct: 133 EDSGNLHGGIMLPLKNMINEAYALDIGRKIKA----QARQAMKDGDYIGARAPYGYRKDP 188 Query: 183 KR-TAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKE------------ 229 + D + ++ IF+ E SLN I + LN+ + S + Sbjct: 189 DNCHKLLIDENTAPVVKQIFEWAHEHVSLNRIVRNLNEMGIPAPSHYKKDTGEITSPGLI 248 Query: 230 --SAWGPSVIEKLLANKALIGICVPSYRARGKGISEIAG---------YYPRVISDDLFY 278 W + K+L ++ G V AG + +IS +LF Sbjct: 249 GSGKWQTRTVMKILESEVYTGDLVQGKTKIVDHQQVKAGEDNLIIAKCTHEPIISYELFN 308 Query: 279 AVQEIRLAPFGISN-SSKNPMLINLLRTVMKCEACGNTMIVH---AVSGSLHGYYVCPMR 334 AVQE R S + K P N+ + + C CG ++ G ++ C Sbjct: 309 AVQEYRKQICEESKATPKRPYTPNIFKGKVFCADCGRSLHRQRAERRKGPDTYWFHCLTN 368 Query: 335 R---LHRCDRPSIKRDLVDYNIINELLFNC---------------SKIQPVENKKDANET 376 C +++ + + L + Q + K Sbjct: 369 SRIEKDSCKGATMQEKELISTVTAILEKELTVALGMSLPLFQLEARQKQEKDKLKIQMSA 428 Query: 377 LELKIIELQMKINNLIVALSVAPEV-TAIAEKIRLLDKELRRASVSLKTLKSKG---VNS 432 +I + + I L E + + S ++ + N Sbjct: 429 KRQEIEKTRRLIRGLYENFVQGILTNDEYFELKADYEYAINALSGEIEVFEKSMDSLDNQ 488 Query: 433 FSDFYAIDLTSK---NGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKHYPLMKVI 489 + + A++ +K L L + E+I I+ + + F F+ + Sbjct: 489 LARYRAMEKDAKTLAQDHVLTAELIERLIERIEIDH-ERNIHVTFRFKNEFQGKAVELCA 547 Query: 490 S 490 + Sbjct: 548 T 548 >UniRef50_C8WS87 Resolvase domain protein n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WS87_ALIAD Length = 475 Score = 322 bits (827), Expect = 1e-86, Method: Composition-based stats. Identities = 76/507 (14%), Positives = 165/507 (32%), Gaps = 70/507 (13%) Query: 4 AIAYMRFSSPGQMS-GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 Y R S+ Q G S++ Q+ + + K + Y D G + G + A Sbjct: 3 VALYCRVSTDEQAEHGFSIDNQKERLIAFCKSQG--WDQYRLYIDDG---YTGTNMDRPA 57 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 + I+ I T++V LDRLSR++ + + + + + + Sbjct: 58 LQRLIKHIKEKKI---DTVIVYKLDRLSRKQRDVLYLLEDVFDKNNVVFKSATEPFDTST 114 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 P ++A A E + R+ K + + SG P + Sbjct: 115 -----PLGKAMLGILAVFAQLERDTIIERLSTGQKLRVK----SGKFSGGRIPFGYVYNS 165 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 + F P + ++K ++ SL+ ++ ++ W + I +L Sbjct: 166 QTGKFEVSPHEAFLVREVYKKYLQGYSLSDLSDWIESQ------TSARYWDHARIRDMLT 219 Query: 243 NKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINL 302 + G+ + P +I +L+ VQ+ + P L Sbjct: 220 RETYTGVMPYGTLRSTEIA-------PPIIERELWEQVQQEMVRRREGF----TPKGEYL 268 Query: 303 LRTVMKCEACGNTMIVHAVSGSLHGY--YVCPMRR-----------LHRCDRPSIKRDLV 349 L +++C CG++ I + Y Y C + C R+ + Sbjct: 269 LSGLLRCAECGSSFIHVIRKKGPYVYYLYGCRSQHQRPKKVPRRAPKQACTVGYRNREEL 328 Query: 350 DYNIINELLFNCSKIQPVE-------------NKKDANETLELKIIELQMKINNLIVALS 396 + +I ++ +++ E +D L + +++ K+N A Sbjct: 329 ESWVIEQVK-RIARLDAEEFEHQIANIETNSDETEDTLRDLRKNLSDIEHKLNRWYEAFE 387 Query: 397 VA-PEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFS-------DFYAIDLTSKNGRE 448 + T + ++I+ L++E RR +++ L+ V + + Sbjct: 388 EGTIDATQLRDRIKHLEEERRRLQTNIEELQDTLVKDTQPQRVFNAAKLIEEAWDYMTFD 447 Query: 449 LCRTLAYKTFEKIIINTDNKTCDIYFM 475 + + I I + I++ Sbjct: 448 EKKNVLRAAISYIEIPRKGQPPVIHWN 474 >UniRef50_Q1JB66 Site-specific recombinase n=20 Tax=Firmicutes RepID=Q1JB66_STRPB Length = 643 Score = 322 bits (826), Expect = 2e-86, Method: Composition-based stats. Identities = 89/551 (16%), Positives = 171/551 (31%), Gaps = 99/551 (17%) Query: 4 AIAYMRFSSPG--QMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 Y R S S+ Q+ ++A+++K + TY D G + G + Q Sbjct: 13 VGIYCRLSKDDGTDNESASIATQKSILADYVKKQG--WHIAKTYVDDG---YSGTNFQRP 67 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 +F + IE+G I ++ + L RL R + + H + I + D Sbjct: 68 SFQNMIKDIENGLI---NCVITKDLSRLGRNYLDCGLYLEVFFPEHNVRYIAVNDGVD-T 123 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 ++ + + IL S S ++K +++ + Q G M + P D Sbjct: 124 LNKSAMDITPFRNILN----EMYSADVSVKIKSAYRARFQQ----GKFMGTTAPYGYVKD 175 Query: 182 D-KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGK------------ 228 + D + IF L + + I K++N + + Sbjct: 176 PADHNHLLIDDKVAHVVREIFDLALAGNGIAKIRKHINKQHILRPAAYAVEQGATGYERH 235 Query: 229 -------ESAWGPSVIEKLLANKALIGICVPSYR------------ARGKGISEIAGYYP 269 W + + +L + G R + I + Sbjct: 236 FEGNEENRYIWSENSVRGILRSPIYAGNLAGYKRIAANMKSKKRPSKLPEEWEVIPDTHE 295 Query: 270 RVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHG-- 327 +++ + F VQ++ + N N+ V+KC CG M + + Sbjct: 296 GIVTQEEFDTVQQLITSRRLPENKGG---FENIFAGVIKCADCGYAMRAMSANRRKRPDI 352 Query: 328 ----YYVCPMRRLHR---CDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANE----- 375 Y C + C SI+ + ++ ++ E A E Sbjct: 353 IDCVQYSCNNYGRYGNIMCTAHSIEARDLFNAVLADINRFADMAVNDEKAVRAIEKRLTD 412 Query: 376 -------TLELKIIELQMKINNLIVALSVAPEVTAIAEKIRL---------LDKELRRAS 419 LE + +L ++ L S E + E+I KE Sbjct: 413 TDQSRAKALEKEQRKLNKRLAELDRLFSSLYE-DKVMERITERNFEMMSGKYQKEQLEIE 471 Query: 420 VSLKTLKSKGVNSFS------DFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNK----- 468 LK + +S+ DF ++ + +EL T+ +KI+++ K Sbjct: 472 ARLKEVTETLNDSYEKSQGVRDFLSLIRNYQGIKELDATIINALIDKILVSEREKLTDGT 531 Query: 469 ---TCDIYFMN 476 IY+ Sbjct: 532 VRQEIKIYYKF 542 >UniRef50_C9XQS3 Conjugative transposon site-specific recombinase n=38 Tax=Firmicutes RepID=C9XQS3_CLODC Length = 537 Score = 322 bits (826), Expect = 2e-86, Method: Composition-based stats. Identities = 90/548 (16%), Positives = 176/548 (32%), Gaps = 98/548 (17%) Query: 4 AIAYMRFSSPGQMSGDS--LNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 Y+R S ++ G+S + QR ++ + K + Y D G S + + Sbjct: 8 TALYLRLSRDDELQGESSSITTQRSMLRLYAKEHHLN--VIDEYIDDGWSGT---NFERP 62 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 +F ++ IE G I ++ + L RL R + +H + I + D Sbjct: 63 SFQRMIEDIEAGKI---NCVVTKDLSRLGRNYIMTGQYTELYFPSHNVRYIAIDDGVDSE 119 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 + K I+ A S +VK ++K K G A P Sbjct: 120 KGE--SEIAPFKNIINEWVA----RDTSRKVKSAFKTK----FAEGAHYGAYAPLGYKKH 169 Query: 182 DK-RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKN---------------- 224 + + D + +E IF L + I K L + V Sbjct: 170 PDIKGKLLVDDETKWIVEKIFSLAYQGYGSAKITKVLREEKVPTASWLNFTRYGTFAHIF 229 Query: 225 ---FSGKESAWGPSVIEKLLANKALIGICVPS----------YRARGKG--ISEIAGYYP 269 K W + ++ +L ++ IG V + + R + + Sbjct: 230 EGKPESKRYEWTIAHVKAILKSEVYIGNSVHNMQSTVSFKSKKKVRKPESEWFRVENTHE 289 Query: 270 RVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIV--HAVSGSLHG 327 +I ++FY VQE + + P + ++KC CG +M + + + + Sbjct: 290 PIIDKEVFYRVQEQIKSRRRQTKEKATP----IFAGLVKCADCGWSMRFATNTANKTPYS 345 Query: 328 YYVCPMRR---LHRCDRPSIKRDLVDYNIINELLFNCSKIQPVENK---KDANETLELKI 381 YY C C I+ D++ ++ L + +Q E K K +I Sbjct: 346 YYACSYYGQFGKGTCSMHYIRYDVLYQAVLKRLQYWAKAVQQDEEKVLNKIQKAGNAERI 405 Query: 382 IEL-------------QMKINNLIVAL------------SVAPEVTAIAEKIRLLDKELR 416 E Q +I+ L + + + ++ L++++ Sbjct: 406 REKKKKASAFKKAENRQNEIDRLFAKMYEDRACEKITERNFVMLSSKYQKEQIELEQQIT 465 Query: 417 RASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIIN--------TDNK 468 L ++ + + + + +EL L EKI+I+ + Sbjct: 466 NLREELSKMEQDMIGAEK-WIELIKEYSVPKELTAPLLNAMIEKILIHEAITNEDNERIQ 524 Query: 469 TCDIYFMN 476 +IY+ Sbjct: 525 EIEIYYRF 532 >UniRef50_D1PSJ0 TnpX site-specific recombinase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSJ0_9FIRM Length = 559 Score = 322 bits (825), Expect = 2e-86, Method: Composition-based stats. Identities = 96/546 (17%), Positives = 174/546 (31%), Gaps = 97/546 (17%) Query: 4 AIAYMRFSSPGQMSGDS--LNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 Y R S +MSG+S + QR ++ ++ K + + + + D G + G + Sbjct: 10 TALYGRLSRDDEMSGESMSIQSQRAILGQYAKEHG--FTNCRFFMDDG---YSGTNFDRP 64 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 AF E ++ ++ G + T+LV+ L RL R + + + + I + D Sbjct: 65 AFIEMMELVQQGRVK---TILVKDLSRLGRNYLEVGRYTEVIFPEYKVRFIAITDGVDSA 121 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 + ++ K I+ A + S +VK ++K K G A P D Sbjct: 122 VGE--NEFAPFKNIINEWYA----KDISRKVKSAFKAKALR----GEYTGAYPPYGYDRD 171 Query: 182 D-KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSG------------- 227 R VP+ I IF++ +E ++ IA+ L + Sbjct: 172 PADRHKLVPNQY-SSVIGEIFRMALEGKTCGQIARELERQQILRPQAYLHEKFGKFVSDR 230 Query: 228 ---KESAWGPSVIEKLLANKALIGICVPSYRARGK------------GISEIAGYYPRVI 272 AW S + +L N+ IG V + G + ++ Sbjct: 231 ILQYPFAWDHSSVRAILMNQVYIGNMVHFRTGSKNFKEKKLIWKPETDWIVVEGTHEPLV 290 Query: 273 SDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGY---- 328 + F+ VQE + K N+ R ++ C CG M Sbjct: 291 DAETFWTVQE----RVKVKQPRKRCCNANIFRGLLFCGECGKRMAFCNRKNEKRRKSLGS 346 Query: 329 YVCPMRRLHR---CDRPSIKRDLVDYNIINELLFN-------------CSKIQPVENKKD 372 + C R + C I + V ++ ++ N + D Sbjct: 347 FSCNTNRRYGGKFCTTHYITLEQVKSIVLEDIRRNAMLASEDTGRYIDYLMQLSKAGQAD 406 Query: 373 ANETLELKIIELQMKINNLIVALSVAPE---------------VTAIAEKIRLLDKELRR 417 L+ ++ + ++ L + E + + L Sbjct: 407 EINALKKELETSRHRLAELATLVQRIYEDHVFDRLPEELYQTLSAKYEAETKNLKARTAE 466 Query: 418 ASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNK-------TC 470 L SK NS DF A+ + EL L + EKI+I+ Sbjct: 467 IQTQLAESASKTQNS-RDFAALVAPYADITELDEELVHTLIEKIVIHEKEILDGLPVMRI 525 Query: 471 DIYFMN 476 +IY+ Sbjct: 526 EIYYRF 531 >UniRef50_Q1V893 Putative uncharacterized protein n=1 Tax=Vibrio alginolyticus 12G01 RepID=Q1V893_VIBAL Length = 550 Score = 321 bits (824), Expect = 4e-86, Method: Composition-based stats. Identities = 126/504 (25%), Positives = 229/504 (45%), Gaps = 38/504 (7%) Query: 4 AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAF 63 A +Y+RFSS Q GDS RQ ++ + L T DLGLSA+ G H + GA Sbjct: 6 AYSYVRFSSLEQAKGDSFRRQTEAAQKYCYEQNL-ELADFTLRDLGLSAYHGNHVKEGAL 64 Query: 64 SEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNID 123 EF++A++ G I G+ LLVES+DRLSRE++ A++R +L GI+++TL DN V+ ++ Sbjct: 65 GEFINAVQQGQIPKGSYLLVESMDRLSRERISIALQRFMHLLELGINIVTLQDNRVFTVE 124 Query: 124 SLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDK 183 SL+ L+ ++++ RA+EESE KS R++ + K+KR+ A E+ + P W+ L Sbjct: 125 SLDNIGDLMMSLVLMMRAHEESETKSKRLREAHKEKRRLARENLKPTRYNNPHWIKLTSN 184 Query: 184 RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLAN 243 + P+RV I+ IF++ + +I + N+ ++ + ++ W + I+K+L Sbjct: 185 GYELI--PERVAIIKRIFQMTINGMGATSIHRRFNEEGLEPWGRSKTGWHSTYIKKILRA 242 Query: 244 KALIGICVPSYR---ARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLI 300 + ++G P R + I G+YP+ I F Q + ++ + ++ Sbjct: 243 RTVLGEYQPHRNEGGKRVEDGDPILGFYPQAIDVSTFKKAQLAIASRTNKTSGIRKSLIN 302 Query: 301 NLLRTVMKCEACGNTMIVHAVSGSLHG--YYVCPMRRLH------RCDRPSIKRDLVDYN 352 NL +KC+ CG +M G Y VC + +C S++ +V+ Sbjct: 303 NLFTGFVKCKNCGASMNYVDKGRGSKGGQYLVCSRAKKKTHYDGIKCQYASMRYVVVEAA 362 Query: 353 IINELLFNCSKIQPVENKKDANETLE------LKIIELQMKINNLIVALSVAPEVTAIAE 406 I+N K+ N+++ + E + + ++ I L+ L + A+ Sbjct: 363 ILNVAATLDLKLHSSPNQEELSRARERFDSIYREKVAVEESIARLVDYLDSSSGSKALLT 422 Query: 407 KIRLLDKELRRASVSLKTLKSKGVN------------------SFSDFYAIDLTSKNGRE 448 K+ + +L+ L+ + + A D ++ R Sbjct: 423 KLDQREAQLKELEKQSSILEKQVDQLELGPASSNIWKELRITLATLRKDAADKSNVPLRA 482 Query: 449 LCRTLAYKTFEKIIINTDNKTCDI 472 + + + I + NK I Sbjct: 483 KINSQLSQCIDSIQFDAINKLVTI 506 >UniRef50_UPI00019734DD site-specific recombinase n=1 Tax=Clostridium sp. M62/1 RepID=UPI00019734DD Length = 507 Score = 321 bits (823), Expect = 4e-86, Method: Composition-based stats. Identities = 72/405 (17%), Positives = 142/405 (35%), Gaps = 50/405 (12%) Query: 4 AIAYMRFSSPG--QMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 Y+R S + DS+ QR+L+ ++LK + L Y D G S + Sbjct: 14 TAVYIRLSREDGDKAESDSVGNQRKLLMDFLKSEPELSL-FSEYVDDGWSGTS---FKRP 69 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 AF + IE G + + V+ L RL R+ + + + G+ I+L D Sbjct: 70 AFERMIRDIEAGLV---DCVAVKDLSRLGRDYIDTGRLLERYFPDMGVRFISLADGIDSR 126 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 + + + + + S ++ + K++ G + A Sbjct: 127 KQEYD-----MLLPIKNIFNEQYARDISRKIHAVVRTKQKA----GEFIGAFACYGYRKS 177 Query: 182 D-KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESA--------- 231 + V D + + +IF+L +E + N IA+ LND + S + Sbjct: 178 PSDKNRLVVDERAAEVVRMIFQLFLEGKGKNTIARMLNDRGIPCPSEYKRLNGENYRNGG 237 Query: 232 -------WGPSVIEKLLANKALIGICVPSYR----------ARGKGISEIAGYYPRVISD 274 W S + K+L ++ +G V R + + G + +I Sbjct: 238 RLSGQSCWTYSTVNKILHSEMYLGNMVQGRRFQRMRGKARQVDRENWIVVEGTHEAIIDR 297 Query: 275 DLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMR 334 ++ +++ + + + N+ ++C CG M+ L G YV + Sbjct: 298 QVWEQTRKLLKSRYAPFQPA---AGENVFAGFIRCGDCGRAMVRKGRDRYLCGTYVRAGK 354 Query: 335 RLHRCDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLEL 379 C +KR ++ ++ EL + Q + + E E Sbjct: 355 AY--CSGHGVKRQELEEIVLAELARAVEEEQQRGSLAELFERAEK 397 >UniRef50_UPI0001C3729C phage integrase family site specific recombinase n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C3729C Length = 517 Score = 320 bits (822), Expect = 5e-86, Method: Composition-based stats. Identities = 95/512 (18%), Positives = 187/512 (36%), Gaps = 58/512 (11%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 + AY R S+ S Q E + N D+ + D G+SA K Sbjct: 26 RVAAYCRVSTDFDEQATSYQTQIEHYEEVINKNPDWIF-AGIFADDGISATSTKG--REQ 82 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F+ + A G I ++ +S+ R +R V + + ++ + I + + +I Sbjct: 83 FNNMIQACHDGKI---DMIITKSISRFARNTV-DCLNYIRELKGLNIPIYFEKE----SI 134 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 ++++ ++ I+ A A +ESE S VKL + + Q ++ A+ ++ Sbjct: 135 NTMDAKGEVLITIM-ASLAQQESESLSQNVKLGIQYRFQQGK---VMVNANSFLGYDKNE 190 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 + +P+ +T++ IF+ +E S IA+ L V G W S I+++L Sbjct: 191 D-GQLIINPEEAETVKRIFREYLEGSSCKQIAQGLERDGVLTARG-SKRWHDSCIKRILE 248 Query: 243 NKALIG----------ICVPSYRARGKGISE---IAGYYPRVISDDLFYAVQEIRLAPFG 289 N+ +G + R R G + + +I +LF QE Sbjct: 249 NEKYMGDALLQKTYTVDFLKKKRVRNNGDVPQYYVEDDHEPIIPKELFLKTQEEMSRRGK 308 Query: 290 IS---NSSKNPMLINLLRTVMKCEACGNTMIVH--AVSGSLHGYYVCPMRRLHR--CDRP 342 ++ ++ ++ C CG+ G + C R + C Sbjct: 309 YVDCLGRNRAFSSMHCFSGLIYCSECGSLYRRIHWNNRGRKVHVWRCITRLENSTECRAR 368 Query: 343 SIKRDLVDYNI---INELLFNCSKIQPVENKK----------DANETLELKIIELQMKIN 389 ++ + + +N+L+ V K D+ E+++ +I ELQ +I Sbjct: 369 TVNENALTNAFVIAVNKLIATNDSYIEVLQKNIATVIETADPDSGESIQARIDELQQQI- 427 Query: 390 NLIVALSVAPEVTAIAEKIRLLDKELRRAS-VSLKTLKSKGVNSFSDFYAIDLTSKNGRE 448 + + A A++I L ++ AS + + + + F I + Sbjct: 428 --LEKSDRNEDFEAEAQEILRLRQQKGNASPNDISSEDMERIRKLQTF--ITKMPSAILD 483 Query: 449 LCRTLAYKTFEKIIINTDNKTCDIYFMNGIVF 480 +L EKI + D + F +GI Sbjct: 484 FDESLVKHLLEKITVFEDK--LEFEFKSGITI 513 >UniRef50_A5D5X5 Putative uncharacterized protein n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D5X5_PELTS Length = 491 Score = 320 bits (822), Expect = 5e-86, Method: Composition-based stats. Identities = 76/515 (14%), Positives = 160/515 (31%), Gaps = 72/515 (13%) Query: 4 AIAYMRFSSPGQMS-GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 Y+R S+ Q G S+ Q+ + + + + Y D G + GK A Sbjct: 5 VACYIRVSTDEQAEQGISIPAQKSRLLAFCRSQG--WNIYGFYIDDG---YSGKDLDRPA 59 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 + T+LV LDRLSR + + G+ ++ ++ Sbjct: 60 MRRLIGDTGAKK---FDTVLVLKLDRLSRRQKDVLFLLEDVFEPGGVGFKSVTESFDTTT 116 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 P+ ++A A E E RV+++ K+ + G M P + Sbjct: 117 -----PFGKAALGMMAVFAQLERETIVERVRMAKKESAKQ----GRFMGGPAPYGYRHNF 167 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERR-SLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 + D + T+ I+ + + IA+ L V + W + + K+L Sbjct: 168 ETKRLEVDEVQAGTVRWIYDRYLSGAPNYRHIAEELEHTGVPGPT--NEKWNKAFVRKIL 225 Query: 242 ANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLIN 301 N G+ + G + ++S + + VQ++ + + + + Sbjct: 226 TNPVYAGLIRH-------RENLYPGRHDPIVSPEKWQEVQKLIKS--RGAVRAAAAVHTG 276 Query: 302 LLRTVMKCEACGNTMIVH--------AVSGSLHGYYVCPMRRLHR--------CDRPSIK 345 LL ++ C CG M V + YYVC + C Sbjct: 277 LLSGIIWCGECGARMRVKNVWQNHPNTNPKKVTRYYVCYSQDRAGGHMVRNPTCRCGYKH 336 Query: 346 RDLVDYNIINELLFNCSKIQPVENKK-------------DANETLELKIIELQMKINNLI 392 V+ ++ EL + + + + K+ Sbjct: 337 GGAVEEQVLRELFCYSYDRRLLRRALEEALAAADNRAFLRELAQARKDLAATEKKLERWY 396 Query: 393 VALSVAP-EVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAID----------- 440 A E + E+++ L + + ++S+ +++ Sbjct: 397 DAFEKGALEGDQLTERVKGLHQRKAYLRGQIAEMESRLKEGKERQTSVEEMMGILQDFPR 456 Query: 441 LTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFM 475 + E R + T + + + ++N ++ F Sbjct: 457 IWENATAEERREIVVNTVKAVKVYSNN-RVEVDFN 490 >UniRef50_Q8NYW8 Cassette chromosome recombinase B n=83 Tax=Bacillales RepID=Q8NYW8_STAAW Length = 542 Score = 320 bits (822), Expect = 6e-86, Method: Composition-based stats. Identities = 93/549 (16%), Positives = 191/549 (34%), Gaps = 75/549 (13%) Query: 2 KKAIAYMRFSSPGQM-SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 K+ Y+R S+ Q G S++ Q I E+ + + Y D G+S GK Sbjct: 7 KRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHH--FEVKDIYADRGIS---GKSMNR 61 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 L + GYI ++V +RL+R + ++ ++ + ++ +L + Sbjct: 62 PELQRILKDAKDGYI---DCVMVYKTNRLARNT-SDLLKIVEDLHKQNVEFFSLSERMEV 117 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWL-S 179 N S + ++A + E V + ++ Q+ G + P Sbjct: 118 NTSS-----GKLMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQG-----NLPLGYDK 167 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEK 239 + + + + + ++ IF+ + IA LN GK + S I Sbjct: 168 IPNSKHELMINQHEANIVKYIFESYAKGHGYRKIANALNHKGYVTKKGKP--FSISSITY 225 Query: 240 LLANKALIGICVPSYRAR---------GKGISEIAGYYPRVISDDLFYAVQEIRLAPFGI 290 +LAN IG + G + +I+ DL+ VQ Sbjct: 226 ILANPFYIGKIQFAKYKDWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQ--MRKKQVS 283 Query: 291 SNSSKNPMLINLLRTVMKCEACGNTM-------IVHAVSGSLHGYYVCPMRRLHR---CD 340 + NLL ++ C CG M + + YY C R C Sbjct: 284 QKPQVHGKGTNLLTGIIHCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCS 343 Query: 341 RPSIKRDLVDYNIINELLFNCSKIQPVENKKDANET---------------LELKIIELQ 385 S++ ++++ ++ ++L + +E + + E+Q Sbjct: 344 ANSVRANVIEDYVMKQILEIVKSDKIIERVVARVNQENQVDCASLHHDIAYKQQQYDEVQ 403 Query: 386 MKINNLIVALSVAPEVTAIAE-KIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSK 444 +K+NNLI + P++T++ I+ +K+L + + LK++ + F A +++ Sbjct: 404 IKLNNLIKTIEDNPDLTSVIRPSIQKYEKQLNDITYQINQLKNQQNEDKTLFDAKEISKL 463 Query: 445 NGREL----------CRTLAYKTFEKIIINTDNK-----TCDIYFMNGIVFKHYPLMKVI 489 + L ++I I D + N I+ + + ++ Sbjct: 464 LQHIFHDIKHIEKSRLKALYLSVIDRIDIKKDGNHKKQFYVTLKLNNEIIKQLFNNKQLD 523 Query: 490 SAQQAISAL 498 + S+L Sbjct: 524 EVHLSTSSL 532 >UniRef50_UPI0001C37BEF site-specific recombinase, putative n=4 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37BEF Length = 547 Score = 320 bits (821), Expect = 7e-86, Method: Composition-based stats. Identities = 82/544 (15%), Positives = 176/544 (32%), Gaps = 92/544 (16%) Query: 2 KKAIAYMRFSSPG--QMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 K Y R S Q +S+ Q+ ++ ++ + N + + + Y D G+S + Sbjct: 4 KITALYCRLSRDDILQGESNSITNQKAILHKYAEDNG--FPNPLFYVDDGVSGTT---FE 58 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 F + IE G + T++ + L RL R+ + + ++ + I + DN Sbjct: 59 RDGFKAMMADIEDGKVA---TVITKDLSRLGRDYLKTGELIEMVFPDYDVRYIAINDN-- 113 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 +D+ L+ + + S +++ +K K Q + + Sbjct: 114 --VDTFKSENELL--AFKNLFNDWYARDCSKKIRAVFKAKEQSGK-----PLSKPIYGYT 164 Query: 180 LDD-KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKE--------- 229 + + +V D + + IFKL ++ + IA+ L + V N + Sbjct: 165 TSEADKYQWVIDEEAADVVRRIFKLCIDGYGPSKIARILTEEVVLNPTAYALSQGRDNGH 224 Query: 230 -----SAWGPSVIEKLLANKALIGICVPSYRARG------------KGISEIAGYYPRVI 272 + W + +L G V R + + + Sbjct: 225 RNANLNRWDHRTVASILERPEYCGHTVNFRTRRKSYKVKKTIRNPQEDWLIFENTHEPIA 284 Query: 273 SDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSG--SLHGYYV 330 + F VQE+R IN ++ C CG M + + + Sbjct: 285 TQQQFDLVQELRKNKRRPQR----FEEINPFSGMVYCADCGQKMYLCRSTSLADNQEHLK 340 Query: 331 CPMRRL--HRCDRPSIKRDLVDYNIINELLFNCSKIQPVENK------------------ 370 C + C I+ ++ ++ E+ + ++ E++ Sbjct: 341 CSTYANDTNDCTIHYIRTSVLSEIVLGEVNKLLAMVKENEDEFVQAAMESSATKHSSELF 400 Query: 371 --KDANETLELKIIELQMKINNLIVALSVAPEVTA--------IAEKIRLLDKELRRASV 420 K A E +I EL L ++ L K++ + Sbjct: 401 KAKKALNKAEKRIAELDRLFTRLYEDNVSGNVSDERYSVMSAGYEDEQNKLKKDVAELTA 460 Query: 421 SLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKT-------CDIY 473 ++T + K + F ++ +L + ++ EKI+I+ +K+ +I+ Sbjct: 461 FIETSEQKASD-VKSFLTAVQKYEHIEKLTPEIMHELIEKIVIHAPDKSCGHRTQQIEIH 519 Query: 474 FMNG 477 F Sbjct: 520 FRFD 523 >UniRef50_C2Z4G3 Site-specific recombinase for integration and excision n=2 Tax=Bacillus cereus RepID=C2Z4G3_BACCE Length = 477 Score = 320 bits (821), Expect = 8e-86, Method: Composition-based stats. Identities = 86/488 (17%), Positives = 172/488 (35%), Gaps = 48/488 (9%) Query: 3 KAIAYMRFSSPGQM-SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 + Y R S+ Q G S++ Q++ + + + Y D G+SA K+ Sbjct: 2 RCAIYARVSTEEQAVEGYSISAQKKKLKAYCDAQ--EWDVVGYYVDEGISA---KNTNRP 56 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 ++ IE G I +LV LDRL+R V + L + + + + Sbjct: 57 ELKRMIEHIEKGLI---DCVLVHRLDRLTRS-VLDLYTLLDVFEEYDCKFKSATE----V 108 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 D+ L I+ A A E E RV++ ++K + G + P + D Sbjct: 109 YDTTTAIGRLFITII-AALAQWERENIGERVRVGQQEKVRQ----GKYTSPRKPYGYNAD 163 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 K + K + I+ ++ S I+K LN + W + +L Sbjct: 164 HKEGILTIIEEEAKVVRSIYNDYLKGHSATRISKRLNA----TKTAGRDYWNEKAVMYIL 219 Query: 242 ANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLIN 301 N IG R + E+ P +I +++F +VQ +R + + ++ Sbjct: 220 ENPLYIGTLRW--RKETEHYFEVPNSVPAIIEEEMFNSVQILRESR--QESHPRSQYGSY 275 Query: 302 LLRTVMKCEACGNTMIVHA-------VSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNII 354 + ++KC CG ++I + + + +Y C R+L+ C ++ ++ II Sbjct: 276 IFSGILKCPRCGRSLIGNYVVSKNKDGTKIKYKHYYCKGRKLNVCTMGNMSERKLEQAII 335 Query: 355 NELLFNCSK------IQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTAIAEKI 408 +L N ++ E ++ ++ ++ + A + + Sbjct: 336 PHILSFYIDATDEDVKLENSNTENEIEQIKSELKIIEKRRKKWQYAWANDHLKDEEFTEF 395 Query: 409 RLLDKELRR-ASVSLKTLK--SKGVNSFSDFYAIDLTSK-----NGRELCRTLAYKTFEK 460 + E + + L LK + I K E + +K Sbjct: 396 MQEENEKEKVLTEELYKLKPAENKKLQNEELKNILKDIKLNWANLNDEEKKIFMQIILKK 455 Query: 461 IIINTDNK 468 ++I +K Sbjct: 456 LVIERSDK 463 >UniRef50_B3G100 Recombinase/resolvase n=1 Tax=Pseudomonas aeruginosa RepID=B3G100_PSEAE Length = 543 Score = 320 bits (820), Expect = 1e-85, Method: Composition-based stats. Identities = 143/508 (28%), Positives = 230/508 (45%), Gaps = 37/508 (7%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYE--DLGLSAFKGKHAQ 59 KA +Y+RFS+P Q GD RQ + E+ + + Y D G+SA++G + Sbjct: 19 PKAYSYVRFSTPEQAKGDGRRRQYKAAIEYADKHDLELVKDGNYAFLDAGVSAYRGNNIN 78 Query: 60 S--GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDN 117 + F + ++ G I PG+ LLVESLDRLSRE+V EA+ R +LN GI V+T D Sbjct: 79 RVSSSLGRFYEYVKEGKIEPGSYLLVESLDRLSREQVTEALVRFLDLLNSGIIVVTFGDG 138 Query: 118 TVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRW 177 TVY EP L+ +I RA+ ES +K RV +W++K+ A G + A+CP+W Sbjct: 139 TVYKK--SAEPMQLVMSISHMSRAHSESSVKGQRVSDAWQQKQALARSEGVPLGAACPQW 196 Query: 178 LSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKN----FSGKESAWG 233 LS D + A+ P+RV ++ +F+L ++ AI K N+ V K WG Sbjct: 197 LSFDGE--AYKVIPERVCVVKRVFELTVQGYGQRAIVKIFNNEGVPVFGSEKRNKSGLWG 254 Query: 234 PSVIEKLLANKALIGICVPSYRARGKG---ISEIAGYYPRVISDDLFYAVQEIRLAPFGI 290 S I K+L N++++G P+ A G+ I +YP V+ ++L+YA E R + + Sbjct: 255 SSSIAKILGNRSVLGEYQPTVWAEGRRRISGEPIKDFYPAVVDEELYYAALEGRSSRN-V 313 Query: 291 SNSSKNPMLINLLRTVMKCEACGNTMIVHAVSG--SLHGYYVCPMRRLHRCDRPSIKRDL 348 S ++K N+ V +C C + M + Y C C SI+ D Sbjct: 314 SRATKTSSNFNVWAKVAQCAYCKSPMHLVNKGKPPKGRKYLRCSRSTKGACINRSIRLDQ 373 Query: 349 VDYNIINELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTA----- 403 + + E+L +K+ KD + L +I+EL ++ + V L + Sbjct: 374 SE-IVFKEIL---AKLNLASLIKDNAQVLRKRIVELDGRLESAKVKLLEVSNLLECHPSR 429 Query: 404 --------IAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAY 455 + +I L+ E +L + N F +DL S GR L Sbjct: 430 TLAQTAVNVEGEITQLESERDECKATLASEHITDKNEL--FRRLDLDSYEGRFLANQQIQ 487 Query: 456 KTFEKIIINTDNKTCDIYFMNGIVFKHY 483 + ++++ D G + K + Sbjct: 488 RLKVRVLLKHDEIRVQYSVFVGDLPKFF 515 >UniRef50_B9M114 Recombinase n=1 Tax=Geobacter sp. FRC-32 RepID=B9M114_GEOSF Length = 613 Score = 320 bits (820), Expect = 1e-85, Method: Composition-based stats. Identities = 145/537 (27%), Positives = 230/537 (42%), Gaps = 53/537 (9%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 + +Y+RFS+ Q+ G SL RQ + + +++T +DLGLSAF GKH G Sbjct: 8 PRCYSYIRFSTLEQLKGYSLARQMEKSRLYAQEKGLVLDESLTLKDLGLSAFSGKHRTRG 67 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 A EFL+ + G I + LLVESLDRLSR+K+ A ++L+ I ++GI V+TL D + Y Sbjct: 68 ALGEFLELAKRGKIPKNSILLVESLDRLSRQKIMTAFDQLREITSYGIIVVTLIDRSEYR 127 Query: 122 IDSLNEPYSLIKAIL-IAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 ++ N+ S + L I R+ +ES KS R +WK KR++ E +TA P WL L Sbjct: 128 HETWNDNISQVFTSLGIMARSYDESLTKSIRHIDNWKAKRENIAE--KKLTARAPAWLKL 185 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 D+ + F RV + IF + ++ +IAK LN + + G ++ W PS ++K+ Sbjct: 186 DESKIKFNGIEYRVAIVRRIFNMALQGIGAASIAKKLNTEKIPAWKG-DNGWFPSYVKKI 244 Query: 241 LANKALIGICVPS---------YRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGIS 291 L NKA++G P + R + YYPR+I+D++FY VQE + Sbjct: 245 LHNKAVLGEFEPHIMVTDEEAGEKVRKPTGEVFSDYYPRIIADEVFYRVQERCKSNKDF- 303 Query: 292 NSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHG--YYVC-PMRRLHRCDRPSIKRDL 348 KN L NL + KC CG M Y VC RR C+ S + Sbjct: 304 -GGKNGKLSNLFGGLAKCGYCGKPMQFVNKGNQTKAGMYLVCDNARRKMGCEYHSFRYPE 362 Query: 349 VDYNII---NELLFNCSKIQPVENKKDANETLELKI-------IELQMKINNLIVALSVA 398 + + + L K+ L+ ++ +L+ +IN L LS A Sbjct: 363 FEDAFLSFCSGLNIADLLTDDAIQKESKIAGLQGRLAVINDEFKQLERRINVLYETLSQA 422 Query: 399 P----------EVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSK---- 444 E+ + + + E + + L K + + Sbjct: 423 ENQAVRDRTMAEINKLVTRQTAIPAERSIINQEINQLSHKQTTIEQSIQGLKELYQFIGS 482 Query: 445 -------NGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKHYPLMKVISAQQA 494 + R R + E+I + N + Y + +AQ+A Sbjct: 483 VPAEQAIDVRMKLRGEIRQLVERIDVYP----VGYMPSNSTINTAYEMEVDFAAQKA 535 >UniRef50_C0CS10 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CS10_9FIRM Length = 543 Score = 319 bits (818), Expect = 2e-85, Method: Composition-based stats. Identities = 85/539 (15%), Positives = 172/539 (31%), Gaps = 72/539 (13%) Query: 3 KAIAYMRFSSPGQ-MSGDSLNRQRRLIAEWLKVN-SDYYLDTITYEDLGLSAFKGKHAQS 60 + Y+R S +S+ QR+++ E + T Y D G + Sbjct: 21 RIGKYIRLSRDDGNSESESITNQRKILDEQIAACFDGSCFVTDEYIDDGRTGTSDDT--R 78 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 F +++G I ++ ++L R R + + I + I+L + + Sbjct: 79 PEFMRLTSDVKNGRI---NCIVTKNLSRAFRNSANQGKFLEEFIPLYNTRFISLYEPRID 135 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 + +S ++ + + + S V+ ++ KR+ SG + A P Sbjct: 136 TYLNPEVVHS-LEVSITGFINEQYAYKTSLDVRRTFDTKRK----SGEFIGAFAPYGYLK 190 Query: 181 DD-KRTAFVPDPDRVKTIELIFKLRME-RRSLNAIAKYLNDHAVKNFS------------ 226 D + V DP+ K ++ IF + S I LN+ + N + Sbjct: 191 DPVDKNHLVVDPEAAKVVKDIFHWFADDGMSKRGIVLKLNEMGISNPTIHKRRQGLNYWN 250 Query: 227 ----GKESAWGPSVIEKLLANKALIGICVPSYRAR------------GKGISEIAGYYPR 270 + W + +L N+ G V + K + + Sbjct: 251 PQIYNNDGLWSEKTVHDILRNRTYTGCLVQGRQKVLSYKLHRRVQLPEKDWYIVKDVHVP 310 Query: 271 VISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYV 330 ++S LF Q + ++L +++C C +M ++ YY Sbjct: 311 IVSPALFEKAQARSRLNTRTAPG---QTQVHLFSGLLRCADCQKSMTRKTSKNNV--YYC 365 Query: 331 CPMRRLH---RCDRPSIKRDLVDYNIINELLFNCS----------KIQPVENKKDANETL 377 C +C R SI D + ++ L I+ N + Sbjct: 366 CSTYTRKSKFKCTRHSIHEDRLKEAVLFTLQKQIELLVNLHQILKTIEIASNSSSEATQI 425 Query: 378 ELKIIELQMKINNL--------IVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKG 429 + +++ ++ L + + L + S+ LK + Sbjct: 426 DNQLLSQNKELKKLSTVQDQLHLDLYAGILSSDDYTRLYTRLKDRSCQLQKSISALKERS 485 Query: 430 V---NSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKHYPL 485 V NS S + L++KN +L +L + I ++ + K I F F + Sbjct: 486 VSLKNSASPYLDNFLSTKNISKLEHSLLTELIHSIQVHENGK-VTINFRFSDPFPSNEI 543 >UniRef50_C0VZG2 Site-specific recombinase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VZG2_9ACTO Length = 515 Score = 319 bits (818), Expect = 2e-85, Method: Composition-based stats. Identities = 88/515 (17%), Positives = 174/515 (33%), Gaps = 62/515 (12%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 ++ Y R S+ + +S Q +++ +D+ + Y D G+S Q Sbjct: 25 RRVAGYARVSTNDEDQANSYQAQIDYYTQYINGRTDWEMVD-VYTDEGISGTSTARCQ-- 81 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F + G I ++ +S+ R +R V +++ ++ + + G++V +N Sbjct: 82 GFQRMIADALTGKI---DLIVTKSVSRFARNTV-DSLTTVRALKDKGVEVYFEKEN---- 133 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 I +L+ L+ I+ + A EES S V KR+ + + S Sbjct: 134 IWTLDSKGELLITIM-SSLAQEESRSISENVTWG---KRKAFKDGKVHLPFSSVIGFCKG 189 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 DP +E I++ +E S IAK L + G W S + +L Sbjct: 190 ADGG-IAIDPQTAPIVERIYREFIEGASPLQIAKGLTADGIPTPRG-AKKWQTSTVRSIL 247 Query: 242 ANKALIGICVPSYR----------ARGKGISE---IAGYYPRVISDDLFYAVQEIRLAPF 288 +N+ G + + + +G + G +P +I +++ A Q + Sbjct: 248 SNEKYKGDALLQKKFTADFLTKKLVKNEGQVPQYYVEGNHPAIIDPEVWEAAQHVAATTA 307 Query: 289 GISNSSKNPMLINLLRTVMKCEACGNTM---IVHAVSGSLHGYYVCPMRRL--HRCDRPS 343 + ++ CE CG H+ S + C R H P+ Sbjct: 308 ITGRHDRT------FSRMVFCEHCGGLYGAKTWHSTSKYKRVVWKCNDRYEVAHPGKTPT 361 Query: 344 IKRDLVDYNIINEL-----LFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVA 398 I + + + + + + ++E++I+ LQ ++ + ++ A Sbjct: 362 ITDEKLQAAWLEAVADLVKRKSLIDWDELHAILAETNSVEVEILNLQGELEIITGLMTKA 421 Query: 399 --------PEVTAIAEKIRLLDKE-------LRRASVSLKTLKSKGVNSFSDFYAIDLTS 443 + T + L++ L A L + A++ Sbjct: 422 SEDNKRIQQDQTEYLARFAQLEERYQHTVTKLDEAQALLARRQGVATELKQMRKALNGLK 481 Query: 444 KNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGI 478 L EK I D + I F NGI Sbjct: 482 PGALVWDEPLFRIITEKFTITMDG-SVKIEFKNGI 515 >UniRef50_Q39QW8 Resolvase-like:Recombinase n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39QW8_GEOMG Length = 622 Score = 319 bits (818), Expect = 2e-85, Method: Composition-based stats. Identities = 146/527 (27%), Positives = 238/527 (45%), Gaps = 33/527 (6%) Query: 1 MKK--AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHA 58 M++ I+Y+RFS Q G SL RQ +L + + + D +Y+DLG SAF +H Sbjct: 1 MERPLCISYIRFSKATQAEGSSLERQLQLSRTYAEEHGLVLDDKHSYQDLGKSAFTSEHV 60 Query: 59 QSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNT 118 + G F FL+ ++ G + G+ LLVESLDRLSRE V A ++ + IL+ GI ++TL D Sbjct: 61 KEGEFGVFLEFVKQGRVPKGSVLLVESLDRLSRESVLTAFKQFQEILDAGIKIVTLSDKM 120 Query: 119 VYNIDSLNEP-YSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRW 177 Y + ++ ++ I RANEES KS R+ +W+ KR++ +TA+CP W Sbjct: 121 EYTKEGFEANIGNIFISLGIMARANEESLRKSERICAAWRLKRKNL--HNIKLTANCPGW 178 Query: 178 LSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVI 237 L L + F+ DRV+ ++ IF+L + + AI+ LN ++ F K W + + Sbjct: 179 LELTPDKKDFILKEDRVEIVKQIFELSLSGLGVKAISTILNKQKIEPFRSK-IGWYQTTV 237 Query: 238 EKLLANKALIGICVPSYRARG-----KGISEIAGYYPRVISDDLFYAVQEIRLAPFGISN 292 K+L+N A+IG P I Y+P +I D FYAVQ G Sbjct: 238 RKILSNSAVIGEFQPHVFGSKHSKPVPDGELIKDYFPPIIDTDTFYAVQAKLK--NGAHR 295 Query: 293 SSKNPMLINLLRTVMKCEACGNTM--IVHAVSGSLHGYYVC-PMRRLHRCDRPSIKRDLV 349 + + NL +C CG+ M + G Y VC RR +C S+K + + Sbjct: 296 PGRTAKVENLFSGYTRCGYCGSRMDVVARHNVGGEVRYLVCDSARRGVKCSYISMKCNEI 355 Query: 350 DYNIINELLF-NCSKIQPVENKKDANETLEL---------KIIELQMKINNL---IVALS 396 + + + E + D N EL K++++Q +I+ L + ++ Sbjct: 356 EKAFFEYCREIDIRYVLRAEQQADQNRLNELRKSLTARNGKLMKVQKQIDMLNVFLDDIT 415 Query: 397 VAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYK 456 E+ E+I+ +E S ++ L + D ID+ +N L + Sbjct: 416 ERAELEHYHEQIKKKLEEKTNLSEEIEKLSKGICIAEYDNNNIDVRVQNLLTLDKAQNKS 475 Query: 457 TFE--KIIINTDNKTCDIYFMNGIVFKHYPLMKVISAQQAISALKYM 501 E KI+ + ++ I+ YP V S +Q + Sbjct: 476 VKEDDKIMFRIRLRDELRQIISQILV--YPRGSVFSDEQIEQKERDY 520 >UniRef50_D0AKJ5 Resolvase n=9 Tax=Bacilli RepID=D0AKJ5_ENTFC Length = 545 Score = 318 bits (816), Expect = 3e-85, Method: Composition-based stats. Identities = 88/524 (16%), Positives = 191/524 (36%), Gaps = 69/524 (13%) Query: 2 KKAIAYMRFSSPGQM-SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 K+ Y+R S+ Q G S+ Q + ++ + Y Y D G+S K+ Sbjct: 7 KRVALYIRVSTQEQALEGHSIQAQEQNGRQFAERMG--YEVVEVYADEGISGKSTKN--R 62 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 A+ + + L++ L RL R + + ++ ++ +L + + + ++ + Sbjct: 63 FAYQRMMKDARN---HRFDLLVIWKLTRLGRNML-DVLQTVEELLRYDVGLHSISEQFDV 118 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKK--KRQDALESGTIMTASCPRWL 178 + + L+ E + V++S + K + G + + Sbjct: 119 TTST-----GKLMLQLLGSFGEFERNQIAENVQMSMQSLVKDKKRYAGGRRLGYVS--GI 171 Query: 179 SLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIE 238 + ++ V +P+ K + LI+ + AIA +LN + K++A+ + ++ Sbjct: 172 DTNGQK-QLVIEPEEAKIVRLIYAKYLGGAGYRAIANFLNRQGYQTV--KKNAFSTTAVK 228 Query: 239 KLLANKALIGICVP-------SYRARGKGISEI--AGYYPRVISDDLFYAVQEIRLAPFG 289 +L NK G + R +GK I G + +IS++ + VQE Sbjct: 229 DILRNKIYAGYLEYARYINWETKRRKGKNPKPILVKGTHEPIISEEDYQKVQERFALEGK 288 Query: 290 ISNSSKNPMLINLLRTVMKCEACGNTM-------IVHAVSGSLHGYYVCPMRRLHR---C 339 + N+L +++C CG M + + YY C + R C Sbjct: 289 QPKWNHTG--ENVLTGLLRCPECGAPMAASNVTNTLKDGTKKRIRYYSCSVFRNKGASVC 346 Query: 340 DRPSIKRDLVDYNIINELLFNCSKIQ--------PVENKKDANETLELKI-------IEL 384 SI+ + + + + L + E ++ LE ++ EL Sbjct: 347 HANSIRAEQAETFVADRLKEIIQLPEVLPRLVAALNEEIVRQSQPLEQELVVLLERKEEL 406 Query: 385 QMKINNLIVALSVAPEV-TAIAEKIRLLDKELRRASVSLKTL-----KSKGVNSFSDFYA 438 + KI AL +PE+ + +++ L ++ R+ + + + D Sbjct: 407 KTKIEKWEAALEDSPELFPMLKDRLDELTEKRRQLHIRENEILGIFQQQGEPIQVKDVQR 466 Query: 439 ID-----LTSKNGRELCRTLAYKTFEKIIINTDNKTC-DIYFMN 476 I +++ ++ + L EKI + ++K +I Sbjct: 467 ILTSLDRFLAQSEKKQIKALYRTFIEKITFDPNHKEMLEITMKF 510 >UniRef50_Q5XBF4 Site-specific recombinase n=9 Tax=Bacteria RepID=Q5XBF4_STRP6 Length = 521 Score = 318 bits (816), Expect = 3e-85, Method: Composition-based stats. Identities = 90/519 (17%), Positives = 189/519 (36%), Gaps = 65/519 (12%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 ++ Y R S+ + S Q R AE++ SD+ + Y D G+S K Sbjct: 26 RRVAGYARVSTDHEDQTTSYESQMRYYAEYISTRSDWEFVKM-YSDEGISGTNTKL--RV 82 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F ++ G I ++ +S+ R +R V +++ ++ + G+++ +N Sbjct: 83 GFKSMIEDALAGKI---DLIITKSVSRFARNTV-DSLTTVRKLKEVGVEIYFEKEN---- 134 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 I +L+ L+ I+ + A EES S V +K+ G + Sbjct: 135 IWTLDSKGELLITIM-SSLAQEESRSISENVTWGLRKQ----FAEGKVHFPYTNVMGFEK 189 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 + V + + KT+ IF+ + ++ +IAK L + + SGK W I+++L Sbjct: 190 GENGEIVVNQEEAKTVRYIFQQALLGKTPYSIAKDLTQQGILSPSGKN-HWSSVTIKRML 248 Query: 242 ANKALIGICVPSYRA------RGKGISE-------IAGYYPRVISDDLFYAVQEIRLAPF 288 N+ G + + K I++ + + ++ + F AVQ Sbjct: 249 RNEKYKGDALLQKTYTIDFLSKKKNINKGELPQYYVENNHEAIVDKETFDAVQASLDRKE 308 Query: 289 GISNSSKNPMLINLLRTVMKCEACGNTM---IVHAVSGSLHGYYVCPMRRL--HRCDRPS 343 S+ L + + C CG+ + H+ S Y C + +C P Sbjct: 309 KGKGSTT------LFSSKLVCGDCGHYFGSKVWHSTSKYRRVIYQCNEKYKGEKKCTTPH 362 Query: 344 IKRDLVDYNIINELLFNCSKIQPVENKKDANETLELKIIELQMK--------------IN 389 + D + + + S + + + + +L+ + ++ Sbjct: 363 VTEDEIKDWFVTAINKVISNKDEIIQNLEMLLDV-GESSDLERRLVELETEVEVVTQMVS 421 Query: 390 NLIVALSVAP-EVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSF-------SDFYAIDL 441 NL+ ++ P + +K L + +++++ + + + ++ Sbjct: 422 NLVKENAIMPQDQDTYQKKYSNLVERHDALVSEIESIEKQLLEAASHQKDLKEFLKTLNQ 481 Query: 442 TSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVF 480 S+ E L ++I I D +T I F NGI Sbjct: 482 QSELISEFDELLWETMVDEIKIFCD-QTVAIKFKNGIEV 519 >UniRef50_A7GVM1 Resolvase domain n=1 Tax=Bacillus cytotoxicus NVH 391-98 RepID=A7GVM1_BACCN Length = 521 Score = 318 bits (815), Expect = 3e-85, Method: Composition-based stats. Identities = 82/526 (15%), Positives = 176/526 (33%), Gaps = 70/526 (13%) Query: 1 MK-KAIAYMRFSSPGQMS-GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHA 58 MK K Y+R S+ Q + G S++ Q + +++ ++ Y D G+S Sbjct: 1 MKTKVALYVRVSTEEQANNGYSIDAQLNTLRNHCEISGKTIVE--EYADKGISGTSISG- 57 Query: 59 QSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNT 118 + L+ + G ++V + RL+R + + ++ ++ + + + + +N Sbjct: 58 -RHGLQKMLEDAKKGLFSE---VIVWKISRLARNTI-DILKIVEELNKNNVVFRSFSENF 112 Query: 119 VYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWL 178 P ++ A E VKL ++ ++ +G M Sbjct: 113 ETET-----PMGKFALQMMGAVAELERNTIVDNVKLGMTQRAKEGKWNGGSM-----LGY 162 Query: 179 SLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIE 238 + D + K + IF L + + AIA LN K K + + I Sbjct: 163 TCID--KELKIVEEEAKIVRYIFDLYINGKGYKAIANKLNHEGYKTKRKKS--FSINSIR 218 Query: 239 KLLANKALIGICVPS---------YRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFG 289 ++AN A G + + + + + + G + +IS D++ ++ Sbjct: 219 TIIANPAYAGFIRFNQVENWSKKRRKGKSENTTTVKGTHEPIISLDVWET--SRIISNQK 276 Query: 290 ISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLH-----GYYVCPMRRLHR---CDR 341 +K L T+++C CG MI H + + + YY C C Sbjct: 277 SHKPAKTFSGTFPLTTLLRCPMCGQGMIGHKIKKNKNGTEYIRYYQCGNFHYKGSAVCKS 336 Query: 342 PSIKRDLVDYNIINELLFNCSKIQPVENKKDANET---------------LELKIIELQM 386 I D+ + + ++ SK ++ D + + + Q Sbjct: 337 NLINADIAEEYVFKKIEEITSKPTILQEIVDRVNRDIKTLKEPIQNNLNYISKALADNQK 396 Query: 387 KINNLIVALSVAPEVTAIA-EKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKN 445 I + + + + ++I L+ + K+L+ + + + S Sbjct: 397 SIQKFMNIIETEDTLPQLILKRIHELEAKREELLEQKKSLEYELAKPTIKEISFEQISNV 456 Query: 446 GR-----------ELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVF 480 E + + KI +NT N + + +F Sbjct: 457 LNTFSKILPNISPEQQKDFLHSIINKITVNTGNSPTERSIKDIELF 502 >UniRef50_C8RU76 Resolvase family prophage LambdaSa04, site-specific recombinase n=2 Tax=Bacteria RepID=C8RU76_CORJE Length = 532 Score = 318 bits (815), Expect = 4e-85, Method: Composition-based stats. Identities = 73/515 (14%), Positives = 162/515 (31%), Gaps = 58/515 (11%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 +++ Y R S+ S Q ++ ++ + Y D G++ KH Sbjct: 25 LRRVAGYARVSTDHDDQVTSYEAQVDYYTRYISDHAGWQFV-KVYTDEGITGTSTKH--R 81 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 F + + G I ++ +S+ R +R V +++ ++ + + G++V + Sbjct: 82 AGFQQMVTDALDGKI---DLIITKSVSRFARNTV-DSLTTVRALKDKGVEVFFEKEG--- 134 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 I + + L+ I+ + A EE+ S V +K+ G + Sbjct: 135 -IWTFDAKGELLITIM-SSLAQEEARSISENVTWGHRKR----FADGKVTVPYSRFLGYD 188 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 + + V +P++ KT+ I+ + + S+ IA+ L D + W I + Sbjct: 189 KGEDGSLVINPEQAKTVRRIYNMYLGGMSIGTIARTLTDEPETFTAAGNKTWYYRSIRAI 248 Query: 241 LANKALIGICVPSY--------RARGKGISEIAGY-----YPRVISDDLFYAVQEIRLAP 287 L N+ G + + + E+ Y + +IS ++ VQ Sbjct: 249 LTNEKYKGDALLQKSYVADYLTKRQVINQGEVPQYYVTASHEAIISPAVWDFVQAEIAKG 308 Query: 288 FGISNSSKNPMLINLLRTVMKCEACGNTM---IVHAVSGSLHGYYVCPMRRLH--RCDRP 342 + + +C CG+ HA S + C + +C Sbjct: 309 ARDQRTQHRTR---PFSSTFECSQCGHFFGSKTWHAGSKYEKVIWRCGHKYAGQDKCATG 365 Query: 343 SIKRDLVDYNIINELLFN------------CSKIQPVENKKDANETLELKIIELQMKINN 390 I + + + + + L +I E+ K+ + Sbjct: 366 HISDQRLKDMFLEAIRLRFGSPTDTGVSQAVLDALDTSDLEVEAAGLLAQINEVAKKLQS 425 Query: 391 LIVALSV-APEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDF-------YAIDLT 442 +I + A + A + ++ + + ++ N + Sbjct: 426 MIAHNARVAQDQQAYEKAFNASHEQHQALLAEHAAVVAEIQNKNNRLAAYHYYREETANL 485 Query: 443 SKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNG 477 L EK ++ D F +G Sbjct: 486 DLEQLVFSPYLCVALLEKGTVDVDG-NVTFQFRDG 519 >UniRef50_Q67SM2 Site-specific recombinase n=1 Tax=Symbiobacterium thermophilum RepID=Q67SM2_SYMTH Length = 532 Score = 318 bits (815), Expect = 4e-85, Method: Composition-based stats. Identities = 88/514 (17%), Positives = 174/514 (33%), Gaps = 61/514 (11%) Query: 1 MKKAIAYMRFSSPGQMS-GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 +++A AY+R S+ Q G+SL Q+ + W K N Y+ Y D G SA Sbjct: 33 LRRAAAYIRVSTGMQAEEGESLPAQQARLHAWAKENG--YVIVREYVDAGESARTA---D 87 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 F L + P ++LV DR +R ++ + G++++++ Sbjct: 88 RPQFVRMLQDAKA-QPRPFDSVLVWKWDRFARNMEDASMYKALFRRRLGVELVSITQP-- 144 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 + + ++ A +S + + V + + G P Sbjct: 145 ----TPEGAVGQLLERMLDLIAEFQSALTAENVYSTMAYLAEQGRWLGKR-----PFGYD 195 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMER-RSLNAIAKYL-NDHAVKNFSGKESAWGPSVI 237 L D R V PD + + F++ R RS+ AIA+ + + W P+ + Sbjct: 196 LRDGR--LVIKPDEAEAVAWAFRMVARRERSVYAIAEGFGTGNPFPATLARGYKWSPTAV 253 Query: 238 EKLLANKALIGICVPSYR-----------------ARGKGISEIAGYYPRVISDDLFYAV 280 K+L N+ IG + R + +P ++ ++ F AV Sbjct: 254 RKMLQNEVYIGRATWNRRYTDIDHVDGKSTKIRGYRDPSDWITVENAHPAIVDEETFEAV 313 Query: 281 QEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMR---RLH 337 Q + S K+ L +++C CG+ + H S VC R Sbjct: 314 QRVLEEYS--SRYPKSKRGEYLFWGMVRCARCGHHLTWHETKKSP-ARLVCSEYFRPRHM 370 Query: 338 RC-DRPSIKRDLVDYNIINELLFNCS-----KIQPVENKKDANETLELKIIELQMKINNL 391 C I+ ++ +I + + + K+ + E + K+ L Sbjct: 371 ACRPMVYIRPKDLEEAVIGAIQEIIAGAEQTPLTFAIPKQARAASPEALLAANAAKVQRL 430 Query: 392 IVALSVA-PEVTAIAEKIRLLDKELRRASV---------SLKTLKSKGVNSFSDFYAIDL 441 + A + + + +L++E R + + +D AI Sbjct: 431 LEAYEAGAITLDDLKTRRTILEQEAERLRQAAASKDSGPDYEAQVAALRERLTDVLAILQ 490 Query: 442 TSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFM 475 + +I+I+ + + DI++ Sbjct: 491 DEEAPVAAKNQALGAVIREIVIDREAQRIDIHWR 524 >UniRef50_B5DC77 Putative recombinase (Fragment) n=1 Tax=Geobacillus stearothermophilus RepID=B5DC77_BACST Length = 503 Score = 318 bits (815), Expect = 4e-85, Method: Composition-based stats. Identities = 92/522 (17%), Positives = 172/522 (32%), Gaps = 57/522 (10%) Query: 3 KAIAYMRFSSPGQM-SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 + Y+R S+ Q G S+ Q+ + + + Y D G + K + Sbjct: 2 RTALYIRVSTEDQAREGYSIQMQKEKLHAYCVSQG--WDIEGFYIDDG---YSAKDLERP 56 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 A ++ I+ G I +LV LDRL+R V + LKL H + + Sbjct: 57 AMKRMIENIQQGLI---DCVLVYRLDRLTRS-VLDLHNLLKLFDEHDCKFKSATEVYDTT 112 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 + + +A A E E + RVK + Q + G L+ Sbjct: 113 TAT-----GRMFITFVAALAQWERENTAERVKANM----QQMVHEGKYPGGKVNFGYRLE 163 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 K+ V D + +F L +E N A LN + G+ W + +L Sbjct: 164 GKK--IVIDEQEAAVVHKMFDLYLEGNGDNRTATLLNRMGHRTRQGR--LWTGKQVRDVL 219 Query: 242 ANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLIN 301 N+ IG G P +I + F Q++R G + Sbjct: 220 TNQVYIGRFFYMDEYH-------DGIIPPIIEREKFETAQKMREGRRGK--HPRQVASDY 270 Query: 302 LLRTVMKCEACGNTM----IVHAVSGSLH--GYYVCPMRRLHRCDRPSIKRDLVDYNIIN 355 + V++C CG M H ++ Y C CD P + ++ + Sbjct: 271 IFSGVLRCARCGRVMPGKLSNHTKKNGVYARRKYTCRGTFTKLCDMPMLDEQAIEEVFLR 330 Query: 356 ELLF----------NCSKIQPVENKKDANETLELKIIELQMKINNLIVALSV----APEV 401 + S Q ++ + +E ++ E++ + L +A + E+ Sbjct: 331 YIREIRDASAASEVAASYEQDSDHISRQIQDIETQLDEIKKRRKRLQLAFANEVISLEEL 390 Query: 402 TAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNG-----RELCRTLAYK 456 + + R ++KEL+ LK + G S + I + + + L Sbjct: 391 KELTGEDRKIEKELQNKLEELKEQEESGEVSPQELIEILMQFGENWNHLSDKEKKNLVSM 450 Query: 457 TFEKIIINTDNKTCDIYFMNGIVFKHYPLMKVISAQQAISAL 498 ++I + +N + + + + IS + Sbjct: 451 FIKEIYVQAENTRPNRWRKRKVWIERVEFRSASERITPISKI 492 >UniRef50_B7JIH4 Resolvase domain protein n=4 Tax=Bacillus cereus group RepID=B7JIH4_BACC0 Length = 515 Score = 317 bits (814), Expect = 4e-85, Method: Composition-based stats. Identities = 94/533 (17%), Positives = 186/533 (34%), Gaps = 68/533 (12%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 KA Y+R S+ Q G SL Q ++ E+ D Y D G + GK+ Sbjct: 6 KAGIYIRVSTEEQKQGHSLEAQESMLKEFADRKGYEIYDV--YNDGG---YSGKNFNRPE 60 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 L ++ I +LV +DRLSR + ++I + +I Sbjct: 61 IQRLLRDLKDDKI---DVILVWKVDRLSRNNTDVMSLIDTELTPRKKNLI------ITSI 111 Query: 123 D-SLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 D + P + L++ A E RVK +K+ + +G + Sbjct: 112 DMDSSSPTGHMFISLLSTFARYERATIIDRVKAGMQKRAEKGYWNGGSI-----LGYDSV 166 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 DK+ + + + + + IF+LR E + I LN+ +K +GK + I+ ++ Sbjct: 167 DKK--LIINENESEIVREIFQLRAEGKGYKFIVNILNEKGIKTKTGKN--FSIPAIKVIV 222 Query: 242 ANKALIGICVPSY--------RARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNS 293 N G V R + G + +I + L+ VQ++ +S Sbjct: 223 NNHIYNGKMVWKKHQDWNTRRRTGKSEPIIVEGIHDAIIDEGLWTRVQKVNELQKNSFSS 282 Query: 294 SKNPMLINLLRTVMKCEACGNTMIVHAVSGS----LHGYYVCPMRRLHR---CDRPSIKR 346 ++N LL ++KC CG ++ H YY+C C I++ Sbjct: 283 NRNFNGNFLLTGILKCPKCGAGTVMSKTKKRNSDDYHLYYMCQAYHNKGSSVCSANLIRK 342 Query: 347 DLVDYNIINELLFNCSKIQPV---------------ENKKDANETLELKIIELQMKINNL 391 D V+ ++N + ++ + E+ + L+ ++ + K L Sbjct: 343 DQVEQQVLNIISLLVNENDIINALIDELNSDNNKTNESHIAHIKMLKKQLGKAYDKRKKL 402 Query: 392 I-VALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAID---------- 440 E + + L ++ + +++ +S+ + + S + Sbjct: 403 DNDYFEGNIEGSTYNRLMNELQLDINKLKRNVRESESEIIKNDSTINKEEVIYALENFNK 462 Query: 441 LTSKNGRELCRTLAYKTFEKIII---NTDNKTCDIYFMNGIVFKHYPLMKVIS 490 L E + L ++ + D K +F+ V + + +S Sbjct: 463 LFKIVNDEEKKLLIRSLIREVQMEANRKDVKEITFWFLPSSVLPSNKVRRTVS 515 >UniRef50_A8SBA3 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SBA3_9FIRM Length = 493 Score = 317 bits (814), Expect = 4e-85, Method: Composition-based stats. Identities = 78/517 (15%), Positives = 164/517 (31%), Gaps = 68/517 (13%) Query: 3 KAIAYMRFSSPGQMS-GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 + I Y+R S+ Q G S+ Q+ + + ++ D G F G + Sbjct: 2 RVICYVRVSTREQAEKGYSVGEQQERLRAYCIAKD--WIVEDVITDPG---FSGAKLERP 56 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 + ++ +LV LDRLSR + + L +G +++ +N + Sbjct: 57 GIQRVIRLVQEKKCEA---VLVWKLDRLSRSQKDTLYLIEDVFLKNGCAFVSMNENFDTS 113 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 + +++ A E E R+ + + + L G P Sbjct: 114 T-----AFGRAMIGILSVFAQLEREQIRERMAVGRVGRAKAGLFHG---GGYAPIGYDYK 165 Query: 182 ---DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAW-GPSVI 237 + V + + +F L ++ +N I KY+ ++ K W + I Sbjct: 166 TIAEGGEGLVVNEYEAMQVREVFSLYLQGWPVNRIRKYMTAR----YTTKSGDWGNDTTI 221 Query: 238 EKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGIS------ 291 +L N IG + + G + +I ++ F A + Sbjct: 222 RDVLKNPLYIGKINWAKK-------IYDGKHEPIIDEETFNAAAARLASSQWKRDCSDGL 274 Query: 292 NSSKNPMLINLLRTVMKCEACGN------TMIVHAVSGSLHGYYVCPMRRLHR------- 338 + +LL ++ C CG + YYVC R Sbjct: 275 ERNSPFHSTHLLGGILWCGRCGARYFASGNYSGKGENRKYWPYYVCYSRAKSAKRMIRDP 334 Query: 339 -CDRPSIKRDLVDYNIINELLFNCSKIQPVENKK---------DANETLELKIIELQMKI 388 C +D I++++ + +E + L + E + +I Sbjct: 335 NCKNDRWPVAKLDKIILDQVRQLIFDPEALERAAGGNQEAPPSERRALLNARRAEAKGQI 394 Query: 389 NNLIVALSVAP-EVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYA------IDL 441 + L+ + A+A++++ L E+ +L+ L+ + ++ Sbjct: 395 DRLLDLCQMGTLPAAAVADRLKSLQDEVEGIDTALRELEEDDPAERLEAARATLVGAAEI 454 Query: 442 TSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGI 478 + R L + +I ++ +N F G Sbjct: 455 LDNGSLDEKRELVHSLIHRIDLDGENIDIHWSFAPGE 491 >UniRef50_C0FPH3 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0FPH3_9FIRM Length = 556 Score = 317 bits (814), Expect = 5e-85, Method: Composition-based stats. Identities = 99/537 (18%), Positives = 184/537 (34%), Gaps = 78/537 (14%) Query: 3 KAIAYMRFS--SPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 KA AY+R S DS++ QR+LI +++ N D + + +D + G Sbjct: 17 KATAYIRLSYTDDHSSESDSVSNQRKLIENFVERNPDIEVVSEKIDD----GYSGIIFDR 72 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 AF E + + G I ++V+ L RL RE + ++ +G+ I + D+ Sbjct: 73 PAFKEMMQDVTDGNI---NCVIVKDLSRLGREYIETGRYLRRVFPAYGVRFIAITDSIDT 129 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 DS ++ +K I+ S + + S KR+ +G + A Sbjct: 130 AHDSSDDLTVSVKNIMN----EAYCRDISIKTRTSLDVKRR----NGDFVGAFPVYGYMK 181 Query: 181 -DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKES--------- 230 +D + VPDP + + IF++R+E S + IA LN + + + Sbjct: 182 AEDNKNLLVPDPYAARVVCDIFRMRLEGASASKIASELNRLGILSPLAYKKNNGLPYAKK 241 Query: 231 --------AWGPSVIEKLLANKALIGICVPSYRARG------------KGISEIAGYYPR 270 W + I ++L ++ G V + + + Sbjct: 242 GYADKADCKWSATTIIRILQDETYTGTLVQGKQGTPHYKIKQMEQRPASEWVRVPDAHEA 301 Query: 271 VISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAV--SGSLHGY 328 +I+ F VQ I+ S N + L ++ C CG+ M +G + Y Sbjct: 302 LIARQDFDLVQRIKGLDTRTSP---NEDTVYLFSGILICGCCGSRMTRKTNRANGKEYHY 358 Query: 329 YVCPMRRLHRCDRP-SIKRDLVDYNIINELLFNCSKIQPVE------NKKDANETLELK- 380 Y CP + C P +K + + + L I +E ++ N+ L + Sbjct: 359 YYCPTGKKKGCAHPVMLKESSLIDCVRDSLKAYIGNIASLEALLTGIDQSSINQALAKEY 418 Query: 381 ---IIELQMKIN-------NLIVALSVAP-EVTAIAEKIRLLDKELRRASVSLKTLKSKG 429 I + + ++ L +L A K+ S++ LK K Sbjct: 419 SDHITDNERRLEQVLEFKARLYESLVGGMLTKEEYASYKAKYTKQAEDIRESIRVLKEKL 478 Query: 430 VNSFSDFYAIDLTSKNGREL------CRTLAYKTFEKIIINTDNKTCDIYFMNGIVF 480 + + + R + I + K DI F + + Sbjct: 479 TEVLENRSERNRWISQFTQFSTLETLDRRALIHMVQSIRVRG-KKELDITFTHEDEY 534 >UniRef50_UPI0001C370AB recombinase n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C370AB Length = 539 Score = 317 bits (813), Expect = 6e-85, Method: Composition-based stats. Identities = 94/554 (16%), Positives = 188/554 (33%), Gaps = 88/554 (15%) Query: 4 AIAYMRFSSPGQMSGDS--LNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 A Y R S G S + Q+ ++ ++ K + + I Y D G S + + Sbjct: 9 AALYCRLSVDDGNYGGSVSIETQKIMLEQYCKDH--KITNYIFYCDDGSSGT---NFERP 63 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 +F D I G I ++V+ L R R + ++ + G+ I D+ + Sbjct: 64 SFQRMYDDISQGKI---DLVIVKDLSRFGRNYIEVGSY-VEEFKDSGVRFIAADDSYD-S 118 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 +++ ++ +K ++ A + V K ++ +G + + P LD Sbjct: 119 LNNSDDLMFPMKNVINEMYARD--------VSKKTKAAKKAKARAGQYIGSKPPFGYKLD 170 Query: 182 -DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSG------------- 227 + R V D +T+ IF+L + N +AK + V Sbjct: 171 PNDRHHLVVDEPAAETVRRIFRLFAQGCGYNKMAKLFREEKVLTPIAYFNLHNPDYFKSD 230 Query: 228 ---KESAWGPSVIEKLLANKALIGICVPSY------------RARGKGISEIAGYYPRVI 272 KE W + I +L N+ +G + R + + +I Sbjct: 231 YWRKEFDWHVTSIRVILENEVYLGNLIYGKQRNKSMKSKQKVRNDRDDWIIVENCHEPII 290 Query: 273 SDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIV---HAVSGSLHGYY 329 S +L+ V +I + S + + + ++ C CG+ + G+ HG Y Sbjct: 291 SQELWDTVHKIMKSKHRPSGTGQTQ----IFAGLLYCADCGHALTYSQKKRRDGTYHGAY 346 Query: 330 VCPMRRLHR---CDRPSIKRDLVDYNIINELL--------------------FNCSKIQP 366 C M + H C I D + ++N++ + CS + Sbjct: 347 SCWMYKTHGKEYCASHYITYDTIYSLVLNDIKRILAGYCNDEEKFRSFLEKRYRCSAQKE 406 Query: 367 VENKKDANETLELKIIELQMKINNLIVALSVA--------PEVTAIAEKIRLLDKELRRA 418 N K E + + EL I+ L + + + E+ Sbjct: 407 NANLKKEYELKKKRYDELDRIISRLYEDSVLGKITESRFEIMSEEYESEQERIRSEIPEI 466 Query: 419 SVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGI 478 + L S ++ F + + +EL L + ++I ++ KT D + I Sbjct: 467 KDRIAKLSSDN-SAADKFIRVIKQYTDIKELNAALLNELIDRIFVHHKEKTSDGNTIQQI 525 Query: 479 VFKHYPLMKVISAQ 492 + + K+ ++ Sbjct: 526 EIFYRFVGKLDKSE 539 >UniRef50_C0M6W3 Putative phage integrase n=1 Tax=Streptococcus equi subsp. equi 4047 RepID=C0M6W3_STRE4 Length = 477 Score = 317 bits (812), Expect = 8e-85, Method: Composition-based stats. Identities = 89/499 (17%), Positives = 177/499 (35%), Gaps = 52/499 (10%) Query: 2 KKAIAYMRFSSPGQMS-GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 +K Y+R S+ Q G S+ Q + ++ + ++ Y D G F G Sbjct: 5 RKVAIYVRVSTTNQAEEGYSIQGQIDSLIKYCEAMG--WIIYEEYTDAG---FSGGKIDR 59 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 A S+ + +H T+LV LDRLSR + + I ++L +N Sbjct: 60 PAMSKLITDAKHKR---FDTILVYKLDRLSRSVRDTLYLVKDVFNQNNIHFVSLQEN--- 113 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 ID+ + +L L++ A E E + R+ + + + T+ P Sbjct: 114 -IDTSSAMGNLFLT-LLSAIAEFEREQITERMTMGKIGRAKSGK---TMAWTYTPFGYDY 168 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 + ++ + DP + +++I+ ++ S+ I LN +GK+ W P ++ L Sbjct: 169 NKEKGELILDPAKAPIVKMIYTDYLKGMSIQKIVDKLNKMDY---NGKDCTWFPHGVKHL 225 Query: 241 LANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPF---GISNSSKNP 297 L N G+ + + G + +I+ +LF Q R ++ + Sbjct: 226 LDNPVYYGMTRYNNKL-------FPGNHQPIITKELFDKTQRERQRRRLGIEENHYTIPF 278 Query: 298 MLINLLRTVMKCEACGNTM-----IVHAVSGSLHGYYVCPMRRLHR---CDRPSIKRDLV 349 +L ++C CG+ M G Y C R R CD P + + Sbjct: 279 QAKYMLSKFLRCRQCGSRMGLELGRPRKKEGKRSKKYYCLNSRPKRTASCDTPLYDAETL 338 Query: 350 DYNIINELLFNCSKIQPVENKKD--------ANETLELKIIELQMKINNLIVA-LSVAPE 400 + +++E+ +K E +E I + +++ L L+ Sbjct: 339 EDYVLHEIAKIQKDPSIASRQKHIEDHELKYKRERIEANINKTVNQLSKLNNLYLNDLIT 398 Query: 401 VTAIAEKIRLLDKELRRASVSLKTL-----KSKGVNSFSDFYAIDLTSKNGRELCRTLAY 455 + + + L + R L + + +DF A+ E + Sbjct: 399 LEDLKTQTNTLIAKKRLLENELDKTCDNDDELDRQETIADFLALPDVWTMDYEGQKYAVE 458 Query: 456 KTFEKIIINTDNKTCDIYF 474 +++ ++ DN F Sbjct: 459 LLVQRVKVDRDNIDIHWTF 477 >UniRef50_Q2BRM1 Site-specific recombinase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BRM1_9GAMM Length = 618 Score = 316 bits (811), Expect = 1e-84, Method: Composition-based stats. Identities = 123/469 (26%), Positives = 215/469 (45%), Gaps = 26/469 (5%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 A+ Y+R+SS Q GDS RQ LI + K N+ ++++ +D +SA+ G + + Sbjct: 36 PIAVYYIRYSSMQQEDGDSERRQLHLIEMYAKANNLRIDESLSAKDRSVSAYHGANMK-S 94 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 + L+ I+ G + G LL+E+LDR SR+ + ++ L I+++GI+V+T+ D +++ Sbjct: 95 GMGDILNHIKEGRLQDGDYLLLENLDRFSRDHILQSAPTLFQIISNGINVVTVSDGQLFS 154 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQ--DALESGTIMTASCPRWLS 179 D +++++I+ RA++ES+ KS R K W KR+ S IMT+ P WL Sbjct: 155 KD-GTALMTMMQSIMQLSRAHDESKAKSDRGKAVWDAKREAIKVGNSNKIMTSVSPNWLK 213 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEK 239 + +T FV +R ++ IF L + +I K LN + F G+ W S I+K Sbjct: 214 PNKDKTEFVIHEERANIVKRIFDLSDQGIGSVSITKILNGENIPTF-GRAEFWQKSAIDK 272 Query: 240 LLAN-------KALIG-ICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGIS 291 +L + + G + + R + YYP+VIS+ LF VQ R + Sbjct: 273 ILNSRAVLGECEFYTGQVLENGKKRRVSTGIVVKDYYPKVISEALFDRVQMKRKSRVTGG 332 Query: 292 NSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHG--YYVCPMR-RLHRCDRPSIKRDL 348 K + NL ++KC C +TM G Y C RC + + D Sbjct: 333 GGRKGSLFSNLFTGIVKCGECNSTMQFINKGKRPKGRTYLKCRGHEHGTRCKGVNWRYDK 392 Query: 349 VDYNIIN--------ELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPE 400 V+ +IIN +LL ++ + ++ + +E ++E+ KI+ L+ L Sbjct: 393 VESHIINLMQHLPIQDLLPQEAQETQLMQQEKEVQAMENSVMEINSKISKLLDILDDCDN 452 Query: 401 --VTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGR 447 + +I E++ +L L LKS + + + R Sbjct: 453 SAIKSITERVSTYQNKLDAEQHKLSALKSNYLLEREKIEHAEDKIRTLR 501 >UniRef50_A7HP92 Resolvase domain n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HP92_PARL1 Length = 537 Score = 316 bits (811), Expect = 1e-84, Method: Composition-based stats. Identities = 88/516 (17%), Positives = 168/516 (32%), Gaps = 67/516 (12%) Query: 3 KAIAYMRFSSPGQMSGD-SLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 KAI Y R S+ Q D S+ Q + K TY D G SA Sbjct: 4 KAIVYARVSTTRQADHDLSIPDQIAHAERYCKERD--IEIVGTYVDPGASAR---DDNRP 58 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F +D ++ G + +LV S R R+ G A+ +++ HG ++++ Sbjct: 59 QFQRMMDDVKSGA-MQVDVVLVHSFSRFFRDACGAAVYT-RILEKHGARLVSMTQ----- 111 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL- 180 ++ + + +++ +S + V S + + +G A+ P Sbjct: 112 -ETGEGAQANLMRHMLSSFDEYQSAETAKHVTRSMIENAKRGFWNG----AAAPYGYKTI 166 Query: 181 ------DDKRTAFVPDPDRVKTIELIFKLRMER------RSLNAIAKYLNDHAVKNFSGK 228 + + +P + ++LIF+L + + + YLN V N +GK Sbjct: 167 VVERHGNKDKKKLDLEPQEAEIVKLIFQLYLYGDGKTGPLGIKNLVSYLNGRGVNNRNGK 226 Query: 229 ESAWGPSVIEKLLANKALIGICVPSYRARGKGISE-----IAGYYPRVISDDLFYAVQEI 283 + I++ L A IG + I P ++ + +F+AVQ Sbjct: 227 P--FRIQHIQEALRRSAYIGTHYFNRTDSRTRKPRPREEWIEIAVPPIVEESIFHAVQAQ 284 Query: 284 RLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMR---RLHRCD 340 A + LL V CE CG M + YY C C Sbjct: 285 LDARNPTMTPPRIASSRILLTGVATCENCGAPMRTRTGKNGQYWYYTCSRSADMGKSGCA 344 Query: 341 RPSIKRDLVDYNIINELLFNCSKIQPVENK---------------KDANETLELKIIELQ 385 ++ +D + + L + +EN + + L+ + EL Sbjct: 345 GVTVPMGKLDEIVTDALCDKVLQADRLENMLGSLLARNSGRRAAAQAKLKELKRERRELD 404 Query: 386 MKINNLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKS-----------KGVNSFS 434 K+ L AL + A+ + E + + + + + + +F+ Sbjct: 405 QKLAKLTDALEKGVPLDAVKSRFTQRQNEREQVNRVISFVNREIDSPLSVVTPEKLEAFA 464 Query: 435 DFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTC 470 + + L + E + + D Sbjct: 465 NGFRARLREDGEPGFRKAYLRLLLENVAVTKDRVRI 500 >UniRef50_C7GGS5 Site-specific recombinase, phage integrase family n=2 Tax=Roseburia RepID=C7GGS5_9FIRM Length = 551 Score = 316 bits (811), Expect = 1e-84, Method: Composition-based stats. Identities = 96/521 (18%), Positives = 176/521 (33%), Gaps = 61/521 (11%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 K Y R S+ Q S Q E ++ N + Y D G+S KH Sbjct: 37 KVCGYARVSTGSQAQATSYTAQVEYYTEKIESNPLWEF-AGVYADEGISGTNVKH--RDE 93 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F + E G I +L +S+ R +R V I+ ++ + G+ + +N I Sbjct: 94 FQMMISDCEDGNI---DLILTKSITRFARNTVE-CIQTIRKLKEIGVGIYFEKEN----I 145 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 ++L+E L IL A A ESE SS + + +K+ QD GT + ++ D+ Sbjct: 146 NTLSEKSELFITIL-ASVAQGESENISSNNRWAIQKRFQD----GTYIISTPAYGYGKDE 200 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 V +T+ I++ + + IAK LN + G E W VI+ +L Sbjct: 201 DGN-LVIIESEAETVRWIYESYLNGMGVYVIAKALNQKGIPTIRGAE-KWQDGVIQDILK 258 Query: 243 NKALIGICVPSYR-------------ARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFG 289 N G + + I +P +++ + AV+ + Sbjct: 259 NPIYEGDMLQQRTYTETRFPFVRRVNNGQRNQYLIKDSHPPIVTHEEAEAVRNLMAYRVD 318 Query: 290 ISNSSKN-PMLINLLRTVMKCEACGNTMIVHA---VSGSLHGYYVCPMR--RLHRCDRPS 343 + + +K+ L + C CG T + C RC + Sbjct: 319 VLHMNKSDYTKRYLFSGRIICGECGRTFRRQKIYIGKPYEKIIWTCSGHVEDKERCCLKA 378 Query: 344 IKRDLVDYN--------------IINELLFNCSKIQPVENKKDANETLELKIIELQMKIN 389 I+ D++ I+ LL +++ + L+ +I ++ + Sbjct: 379 IREDVLHRAFTDMWNKLYTNQGTILEPLLKELTELVAARQDSEEIRQLDKEIKDISGQSQ 438 Query: 390 NLIVALSVA-PEVTAIAE-------KIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDL 441 L + + E ++ ++ + L+ K + V + I Sbjct: 439 ILNQVMRKGYMDSALFMESSSKLGWQLTECRRKKTLLTRKLRRTK-EIVRTEQLIQLIAE 497 Query: 442 TSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKH 482 E L T EKI+++ NG+ Sbjct: 498 QDGLMEEFDEQLFKMTAEKIVVSK-EHDITFCLYNGLKLTE 537 >UniRef50_O05415 TnpX n=7 Tax=Firmicutes RepID=O05415_CLOPE Length = 707 Score = 316 bits (811), Expect = 1e-84, Method: Composition-based stats. Identities = 90/545 (16%), Positives = 188/545 (34%), Gaps = 91/545 (16%) Query: 2 KKAIAYMRFSSPGQM--SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 + Y R S + +S+ Q++ + ++ + N + + + D G F G + Sbjct: 6 RITALYERLSRDDDLTGESNSITNQKKYLEDYARRNG--FENIRHFTDDG---FSGVNFN 60 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 F + +E G + TL+V+ + RL R + L + + + N++ Sbjct: 61 RPGFQSLIKEVEAGNVE---TLIVKDMSRLGRNYLQVGFYTEVLFPQKNVRFLAIN-NSI 116 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWL- 178 + ++ + ++ I+ A + S+++K + + +D G + S P Sbjct: 117 DSNNASDNDFAPFLNIMNEWYA----KDTSNKIKAIFDARMKD----GKRCSGSIPYGYN 168 Query: 179 SLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGK---------- 228 L + V DP + ++ IF L + +S AIA+ L + V + Sbjct: 169 RLPSDKQTLVVDPVASEVVKRIFTLANDGKSTRAIAEILTEEKVLTPAAYAKEYHPEQYN 228 Query: 229 ------ESAWGPSVIEKLLANKALIGICVP------------SYRARGKGISEIAGYYPR 270 W S I +L + +G V + + Sbjct: 229 GNKFTNPYLWAMSTIRNILGRQEYLGHTVLRKSVSTNFKLHKRKSTDEEEQYVFPNTHEP 288 Query: 271 VISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTM----IVHAVSGSLH 326 +IS +L+ +VQ ++ +S N L + C CG M GS+ Sbjct: 289 IISQELWDSVQ---KRRSRVNRASAWGTHSNRLSGYLYCADCGRRMTLQTHYSKKDGSVQ 345 Query: 327 GYYVCPMR--RLHRCDRPSIKRDLVDYNIINELLFNCSKIQP-------------VENKK 371 Y C R++ C SI D V+ I++ + + E ++ Sbjct: 346 YSYRCGGYASRVNSCTSHSISTDNVEALILSSVKRFSRFVLNDEQAFALELQSLWNEKQE 405 Query: 372 DANETLELKIIELQMKINNL--------IVALSVAPEVTAIAEKIRLLDKELRRASVSLK 423 + + + ++ Q + + L +S + ++ D E ++ Sbjct: 406 EKPKHNQSELQRCQKRYDELSTLVRGLYENLMSGLLPERQYKQLMKQYDDEQAELETKME 465 Query: 424 TLKSKGVNS------FSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDN-------KTC 470 T+K++ F ++ KN E+ T+ + +KI++ + Sbjct: 466 TMKTELAEEKVSSVDIKHFISLIRKCKNPTEISDTMFNELVDKIVVYEAEGVGKARTQKV 525 Query: 471 DIYFM 475 DIYF Sbjct: 526 DIYFN 530 >UniRef50_C6JGM9 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGM9_9FIRM Length = 557 Score = 316 bits (810), Expect = 1e-84, Method: Composition-based stats. Identities = 96/543 (17%), Positives = 180/543 (33%), Gaps = 80/543 (14%) Query: 1 MKK----AIAYMRFSSPG--QMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFK 54 MKK A Y+R S + +S+ Q LI ++K SD T++D G F Sbjct: 13 MKKNIWIAAKYLRLSIEDGDKAESESIVNQSILIDNYMKSTSD-ITIVETFKDDG---FS 68 Query: 55 GKHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITL 114 G F L AIE+ I ++V+ L R RE + K+ G+ I + Sbjct: 69 GTDFNRPGFQAMLKAIENKEI---NCIIVKDLSRFGREHIDVDRYIQKVFPQLGVRFIAI 125 Query: 115 CDNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASC 174 DN ++ + + + + + + S +V+ KR G + Sbjct: 126 NDNYDSETANITDTH--LVLPVKSFVNDTYCRQNSQKVRSHLSAKR----NIGEYVGNYV 179 Query: 175 PRWLSL-DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKES--- 230 D ++ DP K + IF +ME S IA LN+ V + + Sbjct: 180 SYGYKKCDTDKSQIEIDPVAAKHVRDIFTWKMEGMSNQLIADKLNELGVLAPADYKRATG 239 Query: 231 -------------AWGPSVIEKLLANKALIGICVPSYRAR------------GKGISEIA 265 W I ++L N G+ R + Sbjct: 240 VNFKSSFQTHLTSRWSAVAIIRILKNPIYYGVLQQGKSQRINYKVKVQRALPKEEWVIFE 299 Query: 266 GYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAV--SG 323 ++ +++ + + VQ + I+ + L ++ C CG+ +I G Sbjct: 300 NHHEGIVTKEEYETVQMLLAKDTRIAPG---ENRLYLFGGLLSCGDCGSNLIRRTNSYKG 356 Query: 324 SLHGYYVCPMRRLHR--CDRPSIKRDLVDYNIINELLFNCSKIQPV--------ENKKDA 373 +Y+C + C R SI+ D++ +++ L + EN D Sbjct: 357 EKTVFYICSSYNKKKDQCSRHSIREDVLIQLVMDSLKMYSKMTDAIRSAVEYLKENSLDT 416 Query: 374 NETLELK--IIELQMKINNLIVAL--------SVAPEVTAIAEKIRLLDKELRRASVSLK 423 ++ I+EL+ K+N L S E++ +++ Sbjct: 417 QTLIQHDDLILELRNKVNKYYKLLHSLSGNLASGVISKDDYTLLRERYQTEIKSLESNIE 476 Query: 424 TLKSKGVNSFSDFYAID------LTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNG 477 + + + + L + +L R + + EKI + + K +I + Sbjct: 477 KQEEYMEDLLENKLLCEEWVNTFLEKPSLGDLDRDMLLQYVEKINVF-EGKKIEIVYRFQ 535 Query: 478 IVF 480 Sbjct: 536 DEL 538 >UniRef50_Q65CS9 Site-specific DNA recombinase n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65CS9_BACLD Length = 414 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 84/422 (19%), Positives = 160/422 (37%), Gaps = 48/422 (11%) Query: 1 MKKAIAYMRFSSPGQM-SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 +K+ Y R S+ Q G S++ Q + + ++ ++ + Y D G+S GK+ Sbjct: 4 IKRVAIYCRVSTEEQATEGYSISAQLQTLRQYTQLYG--WEIAEEYVDEGIS---GKNIS 58 Query: 60 -SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNT 118 A + + +E +LV + RLSR + + + L ++G+ I+ +N Sbjct: 59 GRPAMQKLISDVEKDKFQA---VLVWKISRLSRNML-DTLTLLDKFEDYGVKFISYSENF 114 Query: 119 VYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWL 178 P + L+A A E S VKL K++ + +G ++ Sbjct: 115 DT-----GSPIGRLVVQLMASIAEMERNTLSENVKLGMKQRALEGSWNGGVVFG------ 163 Query: 179 SLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIE 238 D V + + ++ I++L + L +IA YLN + + + + Sbjct: 164 -YDTIEKELVINKKEAEIVQQIYQLYANGKGLKSIANYLNKAGYRTKR--NCYFSINGVA 220 Query: 239 KLLANKALIGICVP---------SYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFG 289 ++L N G R + + G + +ISD+L+ VQ Sbjct: 221 QILDNVIYNGKISWLKVENWDTKRRRGKNPNPILVEGQHEAIISDELWSMVQA---RRKS 277 Query: 290 ISNSSKNPMLINLLRTVMKCEACGNTMI-------VHAVSGSLHGYYVCPMRRLHR---C 339 S + LL ++++C CG M+ + + YYVC C Sbjct: 278 KSFKQRQSNEPFLLSSLLRCPDCGQGMVPAITTNKRKDGTKKKYRYYVCSNFHNKGSSAC 337 Query: 340 DRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLELK-IIELQMKINNLIVALSVA 398 SIK +Y +IN++ S + +K + T ++ + +L ++ L LS Sbjct: 338 RANSIKAYDAEYEVINKIEKILSNQNQLFSKLQSINTTSIESLNQLNSELKQLENRLSEI 397 Query: 399 PE 400 E Sbjct: 398 QE 399 >UniRef50_UPI0001C355F0 cassette chromosome recombinase B n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C355F0 Length = 559 Score = 315 bits (809), Expect = 2e-84, Method: Composition-based stats. Identities = 83/543 (15%), Positives = 172/543 (31%), Gaps = 79/543 (14%) Query: 4 AIAYMRFSSPGQM--SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 Y+R S + DS+ Q+ L+ +++K D L + D G G Sbjct: 24 VGLYVRLSKEDNGYHTSDSIQMQQCLLEQYVKTQQDMKLV-GIFCDNGA---TGTDFDRP 79 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F ++A+ I ++V+ L R R V K+ G+ + + D Sbjct: 80 DFERMMEAVRRREI---DCIVVKDLSRFGRNYVETGYYLEKIFPFLGVRFVAVNDCYDTL 136 Query: 122 IDSLNEPYSL-IKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWL-S 179 + + + +K I+ + A + S + + ++K++ G + + P Sbjct: 137 KCADGDEMVVSLKNIVNSLFA----KDISKKSGTALRRKQEK----GEFIGSWTPYGYLK 188 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVK---------------N 224 + + + DP+ + IF R+E + IAK LN+ + + Sbjct: 189 SPEDKNHLIIDPETAPIVRDIFTWRLEGLGYDEIAKRLNEQKILCPTMVRFLRGEFKKDS 248 Query: 225 FSGKESAWGPSVIEKLLANKALIGICVPSYRAR------------GKGISEIAGYYPRVI 272 + W ++ + N G + R + + + ++ Sbjct: 249 PRTVGTRWVAQTVKNITNNMVYAGHMAQGKQIRSLCEGIPRKEMERQDWIIVRNTHTPIV 308 Query: 273 SDDLFYAVQEIRLAPFGISNSSKN-PMLINLLRTVMKCEACGNTMIVHA---VSGSLHGY 328 +D + VQ I + + P NLL ++ C+ CG TM + G + Sbjct: 309 DEDTWNRVQRINSEAKTKNTEKRQLPKTENLLVGMVYCKDCGRTMGRYKNCSRKGHIRYT 368 Query: 329 YVCPMRRLHR----CDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANE---TLELKI 381 Y C +R+ + C SI + I+ + + EN + + Sbjct: 369 YCCRIRKASKGMSGCTLKSIGEQELFDIILKSIRIQIAATIEQENLLRRLKAQPEYQKTK 428 Query: 382 IELQMKINNLIVALSVAP---------------EVTAIAEKIRLLDKELRRASVSLKTLK 426 +L+ + + A+S + D + + L Sbjct: 429 RKLESSLAEIQTAISKNMARRAALFESYNDNVVSDEEYLYMKQRYDVQAAELLSRQEQLL 488 Query: 427 SKGVNSFSDFYAIDLTSKNGR------ELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVF 480 ++ V + K R +L R + + I I N I + + Sbjct: 489 AEQVVYAKTLSPENEWIKACRKYDGVKQLSRAMVLELIHHITIEGRN-DVHITWNFKDEY 547 Query: 481 KHY 483 + Sbjct: 548 QTL 550 >UniRef50_C6P9P0 Recombinase n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6P9P0_CLOTS Length = 524 Score = 315 bits (809), Expect = 2e-84, Method: Composition-based stats. Identities = 91/530 (17%), Positives = 183/530 (34%), Gaps = 76/530 (14%) Query: 4 AIAYMRFSSPGQMSGDS--LNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 Y R S G S + Q + + ++ N+ + Y D G+S + Sbjct: 13 CAIYCRLSKEDLSKGYSESIKTQEKELTRYVLENN--WNLVGVYIDDGVSGTT---FERD 67 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F +D +E G I ++ + L RL R+ + K+ +G+ I L D Sbjct: 68 DFKRMIDDVECGLI---NCIITKDLSRLGRDYIETGRYLEKVFPEYGVRYIALNDGVDTL 124 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 + + ++ A + S +++ + K ++ G + A P + D Sbjct: 125 KGEDDSI--PFRNVVNDMYA----KDISKKIRFNLHSKMKE----GLYIGAFAPYGYTKD 174 Query: 182 DK-RTAFVP-DPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKN----------FSGKE 229 + VP + + ++ IF L E IAK L D S K Sbjct: 175 PDNKNRLVPANDITTQAVKRIFSLYTEGFGKQKIAKILTDEGYPTPAESKRNYANPSQKI 234 Query: 230 SAWGPSVIEKLLANKALIGICVPSYRARG------------KGISEIAGYYPRVISDDLF 277 W + + ++L N+ IG V R + + + + +I +++F Sbjct: 235 KMWNSNAVHRILTNEVYIGTVVQHKRKKVSYKVKKVKDVPEEEWIKKTHMHEPIIDENIF 294 Query: 278 YAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYY--VCPMRR 335 + VQ+I + + + +L KC CG+ M + +C R Sbjct: 295 WQVQDIIQERAKLKF--RPGHVTHLFSGKAKCGDCGSYMGYFYDKDRKAPCWKLICGAFR 352 Query: 336 LHR---CDRPSIKRDLVDYNIINELLFNCSKI-QPVENKKDANETLELKIIELQM----- 386 + C SI + + ++++L ++I E K A +++E K IE + Sbjct: 353 KYGSKACTMHSIPEEKLKQIVLDDLKSIANEIVDFNELTKIAEDSIEEKYIEQKKEYEEY 412 Query: 387 -----------------KINNLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKG 429 KI LI + ++++ ++L + L + K Sbjct: 413 KKKYLEFQNTFKQMYYDKIKGLINEEQFKMLSDELQSEMKIYHEKLNKIEGQLNSNDVKA 472 Query: 430 VNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIV 479 + + I + ++L R + + + I DN I++ + Sbjct: 473 ILIQQAYDKI-KNIIDMQDLTRQMIENLIDFVEIFKDN-RIKIHYKFSNL 520 >UniRef50_C0WGL8 Site-specific recombinase n=1 Tax=Corynebacterium accolens ATCC 49725 RepID=C0WGL8_9CORY Length = 494 Score = 315 bits (808), Expect = 2e-84, Method: Composition-based stats. Identities = 80/505 (15%), Positives = 171/505 (33%), Gaps = 58/505 (11%) Query: 8 MRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFSEFL 67 R S+ + S + Q ++ ++ + L Y D G++ KH F + + Sbjct: 6 ARVSTDLEEQQSSYHAQVDYYTRYINEHAGWQLV-GIYTDEGITGTSTKH--REGFKQMI 62 Query: 68 DAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDSLNE 127 G I ++ +S+ R +R V ++L+ + G++V +N I +L+ Sbjct: 63 TDALDGKI---DLIITKSVSRFARNTVDTLTH-VRLLKDRGVEVYFEKEN----IWTLDS 114 Query: 128 PYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDKRTAF 187 L+ I+ + A EES S V +K+ D ++ Sbjct: 115 KGELLITIM-SSLAQEESRSISENVTWGHRKRFVDGK---VMVPYKSLLGYKKGADGN-L 169 Query: 188 VPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLANKALI 247 D +R + I+ L + +S+ I L GK + W + +L+N+ Sbjct: 170 AIDEERAPVVREIYGLFLAGKSIREIKDTLETEGHLTPRGK-TTWHVTTTRSILSNEKYK 228 Query: 248 GICVPSYRA---------RGKGISE----IAGYYPRVISDDLFYAVQEIRLAPFGISNSS 294 G + + + G + +I ++ VQ G + S Sbjct: 229 GDALLQKTYTADFLTKTIKRNDGEVAQYYVTGNHAPIIGPEVRDQVQYELATRHGEGSGS 288 Query: 295 KNPMLINLLRTVMKCEACGNTMIVHAVSG--SLHGYYVCPMRRLHR--CDRPSIKRDLVD 350 K ++L + +KC CG S + H + C + C P+++ + Sbjct: 289 K----LHLFSSRLKCADCGGWYGRKTWSSTTNKHTVWHCNNKHAGDQVCATPTLRDHQIK 344 Query: 351 YNIINELLFNCSKIQPVENKKDA-----NETLELKIIELQMKINNLIVALSV-------- 397 + L ++ ++D + LE + +L + L A + Sbjct: 345 TAFLTALSQLGPALEAPSLREDLAAVFDTKQLEAEREDLAERQAELEAAFTAMVAHNQHV 404 Query: 398 APEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNG-----RELCRT 452 A + ++I+ ++ + A+ LK L+++ A+ T Sbjct: 405 ATDQDEYTKQIKRIETDYNHATDRLKNLETQSNERQVKHNALLAAYDQLSRAPVSTFQPT 464 Query: 453 LAYKTFEKIIINTDNKTCDIYFMNG 477 ++ + + +F +G Sbjct: 465 QWTALIDQTTVREE--AIKFFFRDG 487 >UniRef50_A5L3F9 Putative uncharacterized protein n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5L3F9_9GAMM Length = 542 Score = 315 bits (808), Expect = 3e-84, Method: Composition-based stats. Identities = 127/497 (25%), Positives = 211/497 (42%), Gaps = 28/497 (5%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 M +A +Y+RFS+P Q GDS RQ E+ L Y+DLG+S FKG + +S Sbjct: 1 MIRAYSYIRFSTPEQFKGDSFRRQTAQAKEYADSKGL-LLQDFFYKDLGVSGFKGANLKS 59 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 GA +F + + G + + LL+E+ DR SR +A+ + +L+ GI ++TL D +Y Sbjct: 60 GALGKFKEQVRKGVVPKDSWLLIEAWDRFSRMHPKDALREMLELLSLGITIVTLIDGAIY 119 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 D L+ +L+ +++ RA+EES KS RV+ + KK+R+ A E G T CP W+ L Sbjct: 120 KEDELD-TMNLLVCLMLMSRAHEESATKSKRVESAAKKRREKAREEGARFTKICPLWIEL 178 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 + F + KT+ IFK +E AI++ L + + FS W S +EK+ Sbjct: 179 SEDEKNFSLIESKAKTVRDIFKWSIEGLGRIAISRRLVEQGIAPFSKTARTWHTSYVEKI 238 Query: 241 LANKALIGICVPS---YRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNP 297 L N A G R I Y+P I D F A Q N + Sbjct: 239 LKNPAAYGAIQFHTGSGTKRVPDGEPIENYFPAAIDKDTFLAAQYKSSERRISPNKTTYR 298 Query: 298 MLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPM-RRLHRCDRPSIKRDLVDYNIINE 356 L ++ C CG+ M+ +G YY C + C R + K+ D +++ Sbjct: 299 GKAKLFSELLYCS-CGDKMMYVN-NGRGLVYYKCFNVKEKRGCTRRNFKQGNTDELLVSA 356 Query: 357 LLFNCSKIQPVENKKD-----ANETLELKIIELQMKINNLIVALS-----VAPEVTAIAE 406 L S++ + ++ +++ ++ E+Q KI+ + L E Sbjct: 357 LFQFGSRLLAKDTQEAYDFSVELSSIKGQLEEVQNKISVAVEHLLTNPSPAISNRLRELE 416 Query: 407 KIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDL--------TSKNGRELCRTLAYKTF 458 KE +A ++ L++ NS + I ++ R + Sbjct: 417 SEESELKENIKAKEAMSALQAVHTNSAQELEDILDGLSATVTGDDEDKRIDLALGIKQLV 476 Query: 459 EKIIINTDNKTCDIYFM 475 + D++ I Sbjct: 477 SSVTF--DDRCITIKLK 491 >UniRef50_A5VBR4 Resolvase, N-terminal domain n=12 Tax=Alphaproteobacteria RepID=A5VBR4_SPHWW Length = 590 Score = 315 bits (808), Expect = 3e-84, Method: Composition-based stats. Identities = 87/531 (16%), Positives = 181/531 (34%), Gaps = 71/531 (13%) Query: 3 KAIAYMRFSSPGQMSGD-SLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 +A Y+R S+ Q D S+ Q+R W + TY + G SA + + Sbjct: 6 RAALYLRVSTARQAEHDVSIPDQKRQGEAWCAARGYHL--AETYVEAGASAT---NDRRP 60 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F ++ P ++V S R R+ ++ + +G+ ++++ Sbjct: 61 EFQRMIE-AGTTKPAPFDVVVVHSFSRFFRDHFELEFY-VRKLAKNGVKLVSITQ----- 113 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 + ++P ++ ++A +S+ + V + K+ + +G A P + Sbjct: 114 -EMGDDPMHVMMRQIMALFDEYQSKENAKHVMRALKENARQGFWNG----ALPPIGYRII 168 Query: 182 -------DKRTAFVPDPDRVKTIELIFKLRMER------RSLNAIAKYLNDHAVKNFSGK 228 + DP TI LIF+L +E + AI +LN + G Sbjct: 169 AAEQRGAKVKKKLEIDPLHADTIRLIFRLALEGDGSTGPMGVKAIVTHLNARRIFTRDG- 227 Query: 229 ESAWGPSVIEKLLANKALIGICVPSYRARGKGISE----IAGYYPRVISDDLFYAVQEIR 284 WG + ++L + IG + R + K + + P +I + F VQ Sbjct: 228 -GRWGIGQLHRILTRRTYIGEHEFNKRTKAKELKPQSEVVVVPVPPLIDRETFDTVQARL 286 Query: 285 LAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLH---RCDR 341 A ++ LL + C CG M + G + YY C ++ C+ Sbjct: 287 KARNPKVTPARVVSGPTLLTGICYCARCGGAMTIRTGKGGRYRYYACSIKARQGETGCEG 346 Query: 342 PSIKRDLVDYNIINELLFNCSKIQPVEN---------------KKDANETLELKIIELQM 386 +I D +D +I+ + +E +++ L + E ++ Sbjct: 347 RAIPMDKLDTVVIDHIEREFLDPSRLETVLSAVLDRRQERGERRREHIADLNKRSAETEL 406 Query: 387 KINNLIVALSVAP---EVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFY------ 437 ++ L A+ + A+ ++I L +A + ++ +S Sbjct: 407 RLKRLYDAIEAGVTDLDDPALKDRIEGLRALRDQAKADSERAQALLDSSTQQVITPQMVQ 466 Query: 438 -----AIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKHY 483 A +G R +++ + + I G + + Sbjct: 467 RFAATARKRMRIDGGGYRRDHLRAFAQRVEV--AEREVFIKGSKGELLRTL 515 >UniRef50_B0TD52 Resolvase, n-terminal:recombinase, putative n=5 Tax=Clostridiales RepID=B0TD52_HELMI Length = 549 Score = 315 bits (807), Expect = 3e-84, Method: Composition-based stats. Identities = 85/525 (16%), Positives = 174/525 (33%), Gaps = 67/525 (12%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 +A AY R S+ + S Q + + N ++ L + D G++ K + Sbjct: 35 RAAAYCRVSTDQEEQLTSYEAQVAYYTDKIMSNPEWTL-AGIFADEGITGTSVK--KRTN 91 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F + G I +L +S+ R +R V + + ++ + GI VI +N I Sbjct: 92 FLRMIRLCRKGKI---DIILTKSISRFARNTV-DCLNYIRELKELGIAVIFENEN----I 143 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 +++ +I ++A A +SE S V+ ++ + S S + Sbjct: 144 NTMKADTEIIIT-MLAGFAQAQSESISQNVRWGKRQAFKSGKVS---FQYSRIYGYERGE 199 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 V P++ + IF+ + S+ I + L + GK W ++ +L Sbjct: 200 NDKPRVV-PEQAAVVRRIFQSYLAGSSVPDIKRMLEAEGIAAAGGKPQ-WSVGALQYMLR 257 Query: 243 NKALIGI----------CVPSYRARGKGISE---IAGYYPRVISDDLFYAVQEIRLAPFG 289 N+ G C+ + G + ++ +I LF VQ G Sbjct: 258 NEKYCGDALLQKTFVENCISKKTRKNNGELPKYLVQNHHEAIIDRTLFEKVQAEIARRAG 317 Query: 290 ISN--------SSKNPMLINLLRTVMKCEACGNTMIVHA--VSGSLHGYYVCPMRRLHR- 338 L ++ C CG G + C R + Sbjct: 318 KRKVSDKTSKTGQSKYSGRYALTELLICGNCGTPYKRVTWSKRGKKKIVWRCISRLDYGT 377 Query: 339 --C-DRPSIKRDLVDYNIINELLFNCS---------------KIQPVENKKDANETLELK 380 C P++ + + ++ + S + + +E + Sbjct: 378 KYCKSSPTVDEERLQAAVLKAINAMMSNRERLIGILKTNLKITLSEKSSGATNPYAIENR 437 Query: 381 IIELQMKINNLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKG------VNSFS 434 I ELQ + L+ + A + +K R + +E++ +L+ +++ Sbjct: 438 IRELQDSMMELVAVAAKAGNAESYEDKFREISEEIKSLQKTLEQYQAEQNGPDKLARQMD 497 Query: 435 DF-YAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGI 478 D A++ E + + + I + ++K F GI Sbjct: 498 DICKALEDAPFEITEYSNNIVRQFIDTIKVVNEDKLL-FIFKGGI 541 >UniRef50_B0TD54 Resolvase, n-terminal:recombinase, putative n=3 Tax=Clostridiales RepID=B0TD54_HELMI Length = 536 Score = 315 bits (807), Expect = 3e-84, Method: Composition-based stats. Identities = 92/525 (17%), Positives = 179/525 (34%), Gaps = 65/525 (12%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 + AY R SS +S Q ++ N ++ L Y D G++ + + Sbjct: 38 RIAAYARVSSDSDDQLNSFAAQVSHYTTLIRENENWELVD-IYADEGVTGL--RMDKRED 94 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F L G I +L +S+ R SR E +E ++ + + G+ + ++ Sbjct: 95 FQRLLRDCRKGKI---DRILTKSISRFSRNT-RECLETIRELKSLGVTIYFEKEHIDT-- 148 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 E + + + A +ES S ++ S++ + + +G +T P L Sbjct: 149 ---GEISNEMLLTFFSGNAQQESMSISGNMRWSYQHRMK----NGKFITCKAPLGYRL-- 199 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 + + + +F + +S + IA L V GK+ W S I+ LL Sbjct: 200 QSGTLQIHEQEAEIVRYVFNSYLNGKSKDEIAAELTAQGVPTRDGKD-RWHYSTIDYLLK 258 Query: 243 NKALIGICVPSYR-------------ARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFG 289 N+ G + R K + +P +IS D+F QE+ + Sbjct: 259 NERYAGDALLQKRYTTAVLPFQKKRNKGEKDKYYVKYSHPAIISRDIFERAQELNQSRNI 318 Query: 290 ISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHR--CDRPSIKRD 347 + S ++ + L ++C CG+ +G Y+VC + C I Sbjct: 319 PTMSKRS---MYPLSKRIRCGECGSLFKRKTCNGKT--YWVCRNHNKGKSNCTVTQIPEP 373 Query: 348 LVDYNIIN---ELLFNCSK-----IQPVENKKDANETLELKIIELQMKINNLIV------ 393 + + +L N K + ++ K L+++EL +I L Sbjct: 374 EIYGAFLRLYHKLKLNYDKILSPMLDQLQALKRHRNLSNLQVVELNRQIAELTERNHVLN 433 Query: 394 -ALSVAP--------EVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSK 444 S + ++ KIR L E + + S + S ++ + Sbjct: 434 GLKSKGIIDSALFISQTDELSRKIRALKAEKNKL-MEKDEDDSAITETRSLIEILEDGPE 492 Query: 445 NGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKHYPLMKVI 489 TL E + + +NG+ P+ + + Sbjct: 493 RLSGFDETLFDSIVELVTA-ESGERLKFKLINGLELAE-PIERTV 535 >UniRef50_A6NUH0 Putative uncharacterized protein n=2 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NUH0_9BACE Length = 543 Score = 315 bits (807), Expect = 3e-84, Method: Composition-based stats. Identities = 89/521 (17%), Positives = 167/521 (32%), Gaps = 66/521 (12%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 + AY R S+ + +S Q+ + ++ N D+ L + D GLS K + Sbjct: 30 RVAAYCRVSTDSEEQLNSYEAQKAYYTQKIEENPDWEL-AGIFADKGLSGTSMK--KRDD 86 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F + A + G I T+L +SL R +R V + ++ ++++ GI VI +N Sbjct: 87 FKRMIAACKRGRI---DTILTKSLSRFARNTV-DCLDTIRMLRARGIGVIFEKENINTLT 142 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 +S L + A ESE S + Q Sbjct: 143 ESS-----EFLITLFSGFAQAESESLSENIIRGKMMSMQAGH---VPFQYKKLLGYRKGA 194 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 DP+ KT+ I++ ++ SL I L V + W VI +L Sbjct: 195 D-GRPEIDPEEAKTVRRIYRRYLDGCSLAQIQHELEADHVPTAQAIQ-RWSYQVIHNILT 252 Query: 243 NKALIGICVPS---------YRARGKGISE----IAGYYPRVISDDLFYAVQEIRLAPFG 289 N+ IG V R + + +P +I ++FY V+E Sbjct: 253 NERYIGDAVLGKTYTTDCISKRVKKNTGERMQSYVENNHPAIIPKEMFYRVREEMTRRAS 312 Query: 290 ISNSS--------KNPMLINLLRTVMKCEACGNTMIVHA--VSGSLHGYYVCPMRRLHR- 338 L ++ C CG +G + C R Sbjct: 313 KRKVMQRHGKTELGKYSAKYALSELLVCGECGTPYRRCTWARNGKKRIVWRCVSRLEFGT 372 Query: 339 --C-DRPSIKRDLVDYNIINELLFNCSKIQPV---------------ENKKDANETLELK 380 C PS++ + + I+ L V E + +L+ + Sbjct: 373 KYCHSSPSMEEEKLHRAILEALNEFAQAGSEVKADMLDFTRLVWAGQETDGTSLLSLKQR 432 Query: 381 IIELQMKINNLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNS------FS 434 + ++ + L+ + + + +++ L E + + + + +S + Sbjct: 433 LNDITAEQALLLNQVLANMDDEILTAQLKALMDEKQAIQEQIMSAEQSQTHSAAQASRMA 492 Query: 435 DFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFM 475 + + E E+I + D +T I F Sbjct: 493 ELREWMTHLEVNTEYHDEQVRMAVEQITV-VDTETIHIKFR 532 >UniRef50_A6NUG8 Putative uncharacterized protein n=2 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NUG8_9BACE Length = 518 Score = 315 bits (807), Expect = 3e-84, Method: Composition-based stats. Identities = 87/516 (16%), Positives = 166/516 (32%), Gaps = 59/516 (11%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 + AY R SS S Q R + ++ + + L Y D G++ + + Sbjct: 19 RVAAYCRVSSDSSDQLHSYAAQIRYYTDMIQNHDGWELVD-VYADEGITGT--RMDKRED 75 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 + L G I +LV+S+ R +R + + L+ + G+ V +N Sbjct: 76 LNRLLSDCRKGKI---DKVLVKSISRFARNT-RDCLASLRELSRLGVSVQFEKENIDTGT 131 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 + + + A +ES S ++S++++ + G +T P L D Sbjct: 132 LTT-----ELMVSVSGSLAQQESVSISQNQRMSYQRRMER----GEFITCKAPFGYRLID 182 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 + D K + +F + SL IA+ + V GK W + + L Sbjct: 183 GK-RLEVISDEAKLVRWMFNAYLSGHSLEWIAEQMTKTGVSTTDGKPY-WQCTTVLYTLT 240 Query: 243 NKALIGI------------CVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGI 290 N+ +G I +P +I+ F VQE+ Sbjct: 241 NEKYMGDSLCQKTFTTAFPFTQRQNHGEADQYYIENTHPAIITKGTFEKVQELL---RQK 297 Query: 291 SNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLH--RCDRPSIKRDL 348 SN K P I L + C CG L +VC +C I Sbjct: 298 SNRQKIPRQIYPLSRKVYCGQCGTPFARRVGKSGL-VVWVCRKHDKGASKCTMGRIPESA 356 Query: 349 VDYNI---INELLFN--CSKIQPVENKKDANETLELK----------IIELQMKINNLIV 393 + N+L N + ++ ++ + L+ I + + + + Sbjct: 357 LYAAFAGMYNKLKQNVGIVLLPALKQMEELRDALQRDDPAMLAVNRAIAQASEQSHRISQ 416 Query: 394 ALSVA-PEVTAIAEKIRLLDKELRRASVSLKT-LKSKGVNSFSDFY----AIDLTSKNGR 447 + + A A K ++ L + + LK++ ++ D + Sbjct: 417 LQAAGLLDADACAAKFNEINARLTQLRAERRRLLKNEDIDDAIDALQRTADLIQCGPERL 476 Query: 448 E-LCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKH 482 E L + E+I++ Y G+ Sbjct: 477 EGFDEGLFHDLVERIVV-ESQTCVRFYLRGGLELTE 511 >UniRef50_C1I4H9 DNA integration/recombination protein n=4 Tax=Clostridium RepID=C1I4H9_9CLOT Length = 526 Score = 314 bits (805), Expect = 5e-84, Method: Composition-based stats. Identities = 93/526 (17%), Positives = 195/526 (37%), Gaps = 67/526 (12%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 +K+A AY+R+SS Q +SL Q R I E+ Y+D SA + Sbjct: 9 IKRACAYIRYSSDNQRD-ESLEAQIRAIKEFGYAKGYEI--VKVYQDKAKSATTDR---R 62 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 F + + + ++V LDR SR+K A + + + +G+ ++++ +N Sbjct: 63 PGFQQMIKDSAN---DIFDVVIVHKLDRFSRDKYDSAQYK-RKLKQNGVKLVSVTENLD- 117 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 + P S+I +I A S+ + V K+ A +G P + Sbjct: 118 -----DSPESVILESVIEGMAEYYSKNLAREVMKGMKETAYQAKHTG----GLPPLGYDV 168 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 + ++ +V + +++ LIF++ R +L+ + LN K +G + + + I + Sbjct: 169 NAEKK-YVINEREAESVRLIFEMYTARYTLSQMVDELNSRGFKTKAG--AIFKHNSINSV 225 Query: 241 LANKALIGICVPSYRARGK--------------GISEIAGYYPRVISDDLFYAVQEIRLA 286 L N+ G+ + + A+ I I G P++I +L+ QEI + Sbjct: 226 LTNEKYTGVYIFNKSAKKDAYGRRNSHLQKDQSEIIRIEGGMPQIIDKELYEKAQEILRS 285 Query: 287 PFGISNSSKNPMLINLLRTVMKCEACGNTMIVHA---VSGSLHGYYVCPMRRL---HRCD 340 +K LL ++KC CG M + S L+ Y C R+ + C Sbjct: 286 RKKSKAVNK-AKESYLLSGIIKCGECGYAMYGNRRQARSKPLYVSYRCGCRKRTSSNVCS 344 Query: 341 RPSIKRDLVDYNIINELLFNC---------------SKIQPVENKKDANETLELKIIELQ 385 I+++ ++ ++ EL + E +D +E ++ +++ Sbjct: 345 NKEIRKEYIEEYVLAELEERIFNDKSIPLLVEGINEELKKQSEGDEDKRGIIEKELKDIE 404 Query: 386 MKINNLIVALSVAPEVTAIAEKIRLLDKELRRASVS---LKTLKSKGVNSFSDFYAIDLT 442 +I N+++A++ K+ L + ++ +S + D + Sbjct: 405 KQIGNIVMAITNGFIQEEFKVKMEELKERKAYLEGKLVDIEASQSVTKVTEEDIRGLLAG 464 Query: 443 SKNGRELCR-----TLAYKTFEKIIINTDNKTCDIYFMNGIVFKHY 483 K +++++ + + Y Sbjct: 465 FKEYVVSKNIPECKNFIQDFVKEVVVYKTHVEVIFNVGFNFIKDTY 510 >UniRef50_B6FLM9 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLM9_9CLOT Length = 569 Score = 314 bits (804), Expect = 7e-84, Method: Composition-based stats. Identities = 84/560 (15%), Positives = 173/560 (30%), Gaps = 83/560 (14%) Query: 4 AIAYMRFSSP---GQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 Y R S D + Q + ++ L Y D G G Sbjct: 25 TAIYARLSVENSGKSEKVDVITNQIEICKSYIAGCPYLDLVD-VYVDNGR---TGTVFDR 80 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 F+ + I+ G I L+V L R R+ + ++ G+ I + ++ Sbjct: 81 PEFNRLMTDIKSGRIK---CLVVRDLSRFGRDYIETGTYLERIFPQIGLRFIAIKEHYD- 136 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 N D+ L+ + A S+ S +V + K + + GT + P Sbjct: 137 NFDTDGSNEGLMIPLQNMINA-LYSKDISRKVSTALKAQMEQ----GTFQKRNLPYGYRW 191 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVK----------NFSGKE- 229 ++ T V D + + + L+F+ ++E S+ I L+ G Sbjct: 192 NEDHTNMVIDEETAQYVRLMFQWKIEGWSIPTILNELDRLGAPNTELRKRQNGTRKGDGC 251 Query: 230 --SAWGPSVIEKLLANKALIGICVPSYR-------------ARGKGISEIAGYYPRVISD 274 W S + +L+N +G V + +IS Sbjct: 252 SCKGWYSSTLYGILSNPQYVGDTVLGRSMKAIYKGIKSHNVKDKDKWIVFPNTHEALISR 311 Query: 275 DLFYAVQEIRLAPFGISNSSKNPML------INLLRTVMKCEACGNTMIVHA------VS 322 + F VQ+I A +S +NL + C CG M H Sbjct: 312 EDFQKVQDILQAASEARQTSMQKTEEIRATLVNLFEGKIVCADCGKKMYFHRKRIDKDKR 371 Query: 323 GSLHGYYVCPM---RRLHRCDRPSIKRDLVDYNIINELLFNCS----------------- 362 + YY C RR C ++D ++ N++ + Sbjct: 372 KRWYAYYECSTSVGRRYEHCTSHYTRQDTLEANVLAAIQLQVEAALDYDKLLDKLRGSEG 431 Query: 363 KIQPVENKKDANETLELKIIELQMKINNLIVALSVA-PEVTAIAEKIRLLDKELRRASVS 421 + + + +L L++ + K L + + + + D++ S Sbjct: 432 EKNIRDQQNALITSLNLRLNGVSKKRARLYEDYAEGLLDEAEYSFAKKSYDEQYANLSRR 491 Query: 422 LKTLKSKGVN------SFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFM 475 L + + + + + +L + L ++ E + ++ + ++ Sbjct: 492 LDEAVQRRSKFDEAMSVDNKWITLMKSVSTATQLSQDLVDESVELVKVH-EGGAVELVMK 550 Query: 476 NGIVFKHYPLMKVISAQQAI 495 G ++ + + Q+A+ Sbjct: 551 YGDIY-ELTIQSIKEVQEAM 569 >UniRef50_C7GH36 Site-specific recombinase, resolvase family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GH36_9FIRM Length = 560 Score = 313 bits (803), Expect = 9e-84, Method: Composition-based stats. Identities = 88/540 (16%), Positives = 173/540 (32%), Gaps = 78/540 (14%) Query: 3 KAIAYMRFSSPGQM--SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 KA Y R S + ++ Q L+ ++K + D + Y D +F G + + Sbjct: 27 KAGLYARLSHEKEENIERGTIETQMELMKNYVKDHED-IVIEEEYYDA---SFTGTNFER 82 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 F L+ + G I ++V+ L RL R V ++ + I + D+ Sbjct: 83 PDFKRMLEDAKTGRI---NCIIVKDLSRLGRNYVEMGNYIERVFPFLNVRFIAVTDDFDS 139 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWL-S 179 P + + L ++ S +V + ++K + M P Sbjct: 140 FR-----PGTDLMMPLKNIVNEFYAKDISKKVSTAHRRK----WTTDEYMCGFAPYGYLK 190 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNF------------SG 227 ++ V D + LI+KL ++ + IAKYLN+ + + Sbjct: 191 SKTEKNRIVVDEATAGNVRLIYKLFLDGKGYTPIAKYLNEQGIMSPLMYLKSLGYQQNVK 250 Query: 228 KESAWGPSVIEKLLANKALIGICVPSYRARGK------------GISEIAGYYPRVISDD 275 W + ++ +L N+A IG V K + + ++ + Sbjct: 251 TNGVWTKTTVKSILTNQAYIGSAVHGKVVIEKYNNIPLHATDPSEWVIVENTHEPLVDKE 310 Query: 276 LFYAVQEIRLAPFG----ISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVC 331 F QE + P NLL+ + C CG M + + + Y+ C Sbjct: 311 TFEKAQERVKEISDAYFAKEFTKHPPNEKNLLKGKIVCGDCGKGMRLSPRTTKSYVYF-C 369 Query: 332 PMRRLH---RCDRPSIKRDLVDYNIINEL----------LFNCSKIQPVENKKDANETLE 378 C R I ++ V+ + ++ L ++ + + E Sbjct: 370 GTFSDGINPACSRHKINQEDVNNAVFAQISNHMRCCIDALRVIRELNARSSGLKKYDVYE 429 Query: 379 LKIIELQMKINN---------------LIVALSVAPEVTAIAEKIRLLDKELRRASVSLK 423 I + ++ LI K L KE+ +S + Sbjct: 430 KAITRQRRELEKVNRKFSELYGDYSEHLINESEYLTLKQQYLLKSEALKKEIDNLLIS-Q 488 Query: 424 TLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKHY 483 L SK +D+ + R+L + LA +K+ + + + + + Sbjct: 489 NLYSKNYKIDADWENLINKYLKCRKLNKELADAFVDKVQVF-EGGRISVNLVYDDCLEEL 547 >UniRef50_A5Z6W6 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5Z6W6_9FIRM Length = 542 Score = 313 bits (803), Expect = 9e-84, Method: Composition-based stats. Identities = 82/535 (15%), Positives = 169/535 (31%), Gaps = 78/535 (14%) Query: 3 KAIAYMRFS-SPGQ-MSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 KAI Y+R S + + + DS+ QRRLI +++ + + + +D + G Sbjct: 5 KAIKYIRLSYTDDKTVESDSVANQRRLIDDYIARHPEIEVVAEKIDD----GYSGVLFDR 60 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 AF E + IE G ++V+ L RL RE + ++ +G+ I + DN Sbjct: 61 PAFQEMMRMIEQGE---ANCVIVKDLSRLGREYIETGRYMRRVFPAYGVRFIAINDNVDT 117 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 D+ ++ +K I+ S + + + + KR+ SG + A Sbjct: 118 ENDAADDLTVSVKNIMN----EAYCRDISVKTRSALEVKRR----SGDFVGAFTIYGYVK 169 Query: 181 DDKRTA-FVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNF-------------- 225 + D + IF+ R+E S + IA LN + + Sbjct: 170 VGDKHKSLEVDEYAANVVRDIFRKRLEGFSASHIADELNRLGILSPLAYKRNHGMPHAKG 229 Query: 226 ---SGKESAWGPSVIEKLLANKALIGICVPSYRAR------------GKGISEIAGYYPR 270 K+ W + I ++L ++ G V + + G + Sbjct: 230 GYTDRKDCKWSATTIIRILQDETYTGTLVQGKQTTPHFKLKEREDKPSSEWIRVEGTHEA 289 Query: 271 VISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAV--SGSLHGY 328 +I F VQ + + +S + L ++ C CG M + Y Sbjct: 290 IIQKHDFDLVQRL---RRIDTRTSPKSDKVYLFSGILICGCCGCRMTRKTNRYKDKEYHY 346 Query: 329 YVCPMRRLHRCD-RPSIKRDLVDYNIINELLFNCSKI-----------------QPVENK 370 Y CP + + C +K + + + L + + + + Sbjct: 347 YYCPTGKKNGCTSSVMLKESDLIECVQDSLKGHIENVASLDALLSSISQERINRELAQEY 406 Query: 371 KDANETLELKIIELQMKINNLIVALSVAP-EVTAIAEKIRLLDKELRRASVSLKTLKSKG 429 E ++ + + L L R + ++ ++ K Sbjct: 407 AAQIRVNEKRVAQTEGFKAKLYENLVSGILTKEEFLSYKRKYNADIELFQKAIVEWNDKL 466 Query: 430 VNSFSDFYAIDLTSK------NGRELCRTLAYKTFEKIII-NTDNKTCDIYFMNG 477 + + + ++ R + I + D + + + Sbjct: 467 TDVLENRSERNRWINHFMKFSTMEDIDRRAVMQLIRSIRVMGKDELHIEFNYQDE 521 >UniRef50_C1CGJ9 INT n=2 Tax=Streptococcus pneumoniae RepID=C1CGJ9_STRZJ Length = 475 Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats. Identities = 83/496 (16%), Positives = 175/496 (35%), Gaps = 50/496 (10%) Query: 3 KAIAYMRFSSPGQ-MSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 K Y+R S+ Q G S++ Q+ + + K+ + Y D G F G + Q Sbjct: 6 KVAIYVRVSTTNQVEEGYSIDEQKDKLEAYCKIKD--WKIYDVYVDGG---FSGANTQRP 60 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 + ++ + +LV LDRLSR + + + + I+L +N + Sbjct: 61 ELERLISDVKRKKV---DIVLVYKLDRLSRSQKDTLFLIEDVFAKNDVAFISLQENFDTS 117 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 P+ +++ A E E R+ L + + ++ + + Sbjct: 118 T-----PFGKASIGMLSVFAQLEREQIKERMMLGKEGRAKNGKS---MSWTTIAFGYDYS 169 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 + +P + + IF + + + I + LN G++ WG ++ + LL Sbjct: 170 KETGVLSVNPTQALIVNRIFTEYLNGKPVVKIIRDLNAEGHV---GRKRPWGETITKYLL 226 Query: 242 ANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAP----FGISNSSKNP 297 N+ +G + G + +I+ +LF VQ + N+ + Sbjct: 227 KNETYLGKVKYKDKVY-------EGQHEPIITQELFDLVQLEVERRQISAYEKYNNPRPF 279 Query: 298 MLINLLRTVMKCEACGNT----MIVHAVSGSLHGYYVCPMRRL----HRCDRPSIKRDLV 349 +L +MKC CG + +G H Y C R RC+ ++ + Sbjct: 280 RAKYMLSGLMKCGYCGASLGLRYTRKDKNGISHHKYQCRNRHSKDLEKRCESGWYSKEEL 339 Query: 350 DYNIINELL------FNCSKIQPVENKKDANETLELKIIELQMKINNLIVA-LSVAPEVT 402 + +I EL ++ + + E ++ ++ + +++ L L Sbjct: 340 ERGVIKELERIKFDPKYKNETLAKKEETIKVEEIKKQLERINNQVSKLTELYLDEIITRK 399 Query: 403 AIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRT----LAYKTF 458 + EK + E + L+ KS ++ L + +L + Sbjct: 400 ELDEKNDKIKTERQFLEEQLENQKSNVLSIRKRKLTRLLKDFDVEKLSYEDASKIVKNII 459 Query: 459 EKIIINTDNKTCDIYF 474 ++II+ D + + F Sbjct: 460 KEIIVTKDGMSITLDF 475 >UniRef50_UPI0001C36E46 resolvase family site-specific recombinase n=5 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C36E46 Length = 548 Score = 312 bits (801), Expect = 2e-83, Method: Composition-based stats. Identities = 78/549 (14%), Positives = 173/549 (31%), Gaps = 91/549 (16%) Query: 4 AIAYMRFSSPG--QMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 Y+R S + S+ Q+ ++ +++ + + Y D G + G Sbjct: 9 VGIYLRLSKEDMLEGESLSIENQKMILTKFV--HDKGWNLVSEYVDDG---YSGTDFDRP 63 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 + L + G I ++V+ L R R + + + I I L DN Sbjct: 64 GIQKLLADAQLGKI---NIVVVKDLSRFGRNYIEVGRYIDYIFPMNNIRFIALNDNVDTA 120 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 S + I+ S S ++K ++ + G + P + Sbjct: 121 DRSSTALD--MMPIINL-FNEWHSSSTSKKIKAVFEASAKA----GKYLGGRVPYGYDMG 173 Query: 182 DKRTAF-VPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFS-------GKESA-- 231 D V + + ++ IF+LR++ S IA LN+ + S GKE+ Sbjct: 174 DDPNHLPVINSETAPVVKHIFELRLQGLSQRKIADRLNEEGILCPSEYYYQRQGKENPVV 233 Query: 232 ----WGPSVIEKLLANKALIGICVPSY------------RARGKGISEIAGYYPRVISDD 275 W +++++L N +G V + + + +I+ + Sbjct: 234 SRKLWSRPIVDRMLHNPMYLGNLVQLKTTTVSHKNHKLVKKDEAEWVVVPNTHEAIITQE 293 Query: 276 LFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAV-------SGSLHGY 328 ++ +EI + L +M C CG M +G+ H Sbjct: 294 IWDRCREIDEEHSIGRRTKTGDTK--PLCALMYCADCGFRMKFSRNQKMRGVTTGNPHQI 351 Query: 329 ----YVCPMRRLHR---CDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLELKI 381 Y C L+ C I + ++ ++N++ ++ E K + Sbjct: 352 VVGSYNCGTYSLYGKTVCPTHYISQRTIEEIVLNDIRSMMQLVEEDEAKARKQFLARKQK 411 Query: 382 IELQ------MKINNLIVALS--VAPEVTAIAEK-------------IRLLDKELRRASV 420 E Q K+ ++ + +K + + E S Sbjct: 412 QESQQISSDKEKLRKAKERIAELDGLIQSVYEDKVSGEIPASMCTKLLTKYEAEQNALSA 471 Query: 421 SLKTLKS------KGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIIN-----TDNKT 469 ++ +++ + + ++ + +N L R + + + + ++ + Sbjct: 472 EVQEIEARQLMQKQDEHDVDEYISRLKRFRNAEYLTRQMCLELIDSVTVDEFERGKQERD 531 Query: 470 CDIYFMNGI 478 IY+ Sbjct: 532 IHIYYKFID 540 >UniRef50_Q98DK0 Site-specific recombinase n=1 Tax=Mesorhizobium loti RepID=Q98DK0_RHILO Length = 578 Score = 312 bits (801), Expect = 2e-83, Method: Composition-based stats. Identities = 122/450 (27%), Positives = 203/450 (45%), Gaps = 25/450 (5%) Query: 11 SSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFSEFLDAI 70 S+ Q+ GDSL RQ ++ + ++ ED+G+SAFKG + +G +FL+A+ Sbjct: 2 STDIQLKGDSLRRQTERSKQYADDHDLQLVEDFRLEDIGVSAFKGDNLSTGELGKFLEAV 61 Query: 71 EHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDSLNEPYS 130 + G I G+ LLVES DRLSR+K+ A+ I ++GI+++TL DN +Y E Sbjct: 62 KAGRIPKGSYLLVESFDRLSRQKLSAAVPLFFDITSNGINLVTLSDNQLYKAGEA-EFAQ 120 Query: 131 LIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDKRTAFVPD 190 LI +I + RANEESEIKS R+ +W KR+ + +T CP WL L D R F Sbjct: 121 LIISIAMMARANEESEIKSQRLSAAWDAKRRAIDD--KKLTGLCPAWLELSDDRKNFGVL 178 Query: 191 PDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLANKALIGIC 250 DR + + IF+ + I + LND F G+ + W S + K+L +A++G Sbjct: 179 EDRAQIVRRIFEDSASGQGSFVITRRLNDLGTHAF-GRSNGWVQSYVTKILQTRAVLGEF 237 Query: 251 VPSYRARGKGIS---EIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVM 307 P + GK I I GYYP+++ ++LF Q R K L NL + Sbjct: 238 QPHTKQNGKRIPFGDPIPGYYPKIVDEELFLRAQFARGKRRIEGGGRKGEALRNLFTHLA 297 Query: 308 KCEACGNTMIVHAVSGSLHG--YYVCPMRRLH-RCDRPSIKRDLVDYNI--------INE 356 KC CG+ M G Y C C + + + + E Sbjct: 298 KCGYCGSPMHFLNKGFGPGGGTYLKCSQALRGLDCVSTPWRYQDFERSFFLYVKEIDLGE 357 Query: 357 LLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTAIAEKIRLLDK--- 413 +L + D +L+ K +L+++ ++ A + ++ K++ + Sbjct: 358 MLAASATKSDAIALDDRLTSLKEKRNQLEVQRERSYALINQAISIDFVSAKLKECESDLA 417 Query: 414 ----ELRRASVSLKTLKSKGVNSFSDFYAI 439 ++ + L ++ + S + + + Sbjct: 418 GVDVQISEVELQLSAIREQQSISPDELHRL 447 >UniRef50_D1VV52 Site-specific recombinase n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VV52_9FIRM Length = 548 Score = 312 bits (800), Expect = 2e-83, Method: Composition-based stats. Identities = 90/551 (16%), Positives = 187/551 (33%), Gaps = 84/551 (15%) Query: 3 KAIAYMRFSSPGQMSGDS--LNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 KA Y R S + G+S + Q+ L+ ++K + Y D G + G + Sbjct: 12 KAAIYCRLSKDDEQKGESASIQNQKELLENYVKSRG--WSIYDVYIDDG---YTGLNTNR 66 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 +F + IE+ + ++ + L RL R + + + I L D Sbjct: 67 PSFQRLIRDIENKKV---DIVITKDLSRLGRNYLQTGYYTENFFPKNNVRYIALNDGVDT 123 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 + N K +L S S ++K ++ + + G + P Sbjct: 124 FQE--NNEIVPFKNVLN----EFYSRDVSKKMKSAYMTRARQ----GKFIGCLAPIGYRK 173 Query: 181 D-DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFS------------- 226 D + V D + +E IF L + AI + L + + + Sbjct: 174 DNEDPHKLVIDDETSWIVEKIFDLAFSGYGVQAIRRRLFEEKIPTPTWWNRKKGLRNKKT 233 Query: 227 -------GKESAWGPSVIEKLLANKALIGICVPSYRAR-----------GKGISEIAGYY 268 G E W + +++++ N IG + + + Sbjct: 234 KLEMTVDGGEYWWDCTTLKEIIENPVYIGHIASQKVNYKFKVGWLSDKPKEEWIIVENTH 293 Query: 269 PRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMI-VHAVSGSLHG 327 +IS+D++ E + + + + ++KC CG ++ S Sbjct: 294 EPIISEDIYNIANEKLKSRRRPFKNGEES----IFAGIVKCPDCGKSLNLGRNKSKKREK 349 Query: 328 YYVCPMRRLHR---CDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLELKIIEL 384 C R + C + I D + ++ ++ N ++++K+ + LE Sbjct: 350 LLTCNTYRRYGKSLCSQHRIYYDTLYEIVLKDIRKNAE--IALKDEKEIIKALEKSRE-- 405 Query: 385 QMKINNLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVN---SFSDFYAIDL 441 + E I +KI + + ++ L ++ S S+F I Sbjct: 406 ----------IDNEEEQKFIMDKIYEDQIRVEDLTKKIERLYDDWLDNKISESNFQKILE 455 Query: 442 TSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKHYPLMKVISA--QQAISAL- 498 S+N ++ +K+I+ D + ++ ++ KH + K+ + IS + Sbjct: 456 KSQNEQDYLNQRIKD-NQKLIVKEDLEDINVKKWIELIKKHRDIKKLDKETLNELISKIY 514 Query: 499 ---KYMVDGEI 506 K +V+GEI Sbjct: 515 VHEKEVVNGEI 525 >UniRef50_A5Z7F2 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z7F2_9FIRM Length = 548 Score = 311 bits (798), Expect = 3e-83, Method: Composition-based stats. Identities = 92/521 (17%), Positives = 196/521 (37%), Gaps = 65/521 (12%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 K+ AY+R S+ + +S Q++ E + + ++ L Y D G++ K K + Sbjct: 29 KRVAAYVRVSTDDEEQLNSFTSQKQYYQEKISQSKEWILV-GIYADEGITGTKTK--KRD 85 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F ++ +G I +L +S+ R SR V + I+ ++++ + G+ VI +N + Sbjct: 86 DFLRMINDCMNGKI---DIILTKSISRFSRNLV-DTIQYVRMLKSKGVTVIFEKENINTS 141 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 S ++ L++ A E E S+ VK+ K K + G +M + Sbjct: 142 T-----MESEMQLALLSTLAQNEVESLSANVKMGVKMKMRR----GELMGFNGCLGYDYH 192 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 + + + + +T+ LIF L + +IAK L N G W S + ++ Sbjct: 193 KEDKSITVNEEEAETVRLIFDLYLSGMGGISIAKELKRQCRLNKKG-VCKWTDSGVIGII 251 Query: 242 ANKALIGICVPSYRARGKGISE-------------IAGYYPRVISDDLFYAVQEIRLAPF 288 N+ G + IS+ I ++ ++S +++ QEIR + Sbjct: 252 KNEKYKGDLLLGKTYTVDPISKRRLENRGEEDKFYIENHHEPIVSREVWDRAQEIRKGRY 311 Query: 289 GISNSSK-----NPMLINLLRTVMKCEACGNTMIV---HAVSGSLHGYYVCPMRRLHR-- 338 + ++ + L ++ +C CG H +L + C + + Sbjct: 312 RSAVNNDPVIRIRNNKMYALSSMCECGFCGEIYTRRIHHQSRSTLKPVWKCSNQIRNGIA 371 Query: 339 -CD-RPSIKRDLVD--------------YNIINELLFNCSKIQPVENKKDANETLELKII 382 C+ +I +++ ++++ LL + ++ + + ++ + Sbjct: 372 ACEHSRAIDESIIENSFLEMMSLMADNFDDVLDNLLATIEESLNSDDCVNKLKRIDKSLA 431 Query: 383 ELQMKINNLIV-ALSVAPEVTAIAEKIRLLDKELRRASVSLKTL------KSKGVNSFSD 435 + + K N L L A +K L + + + L + N + Sbjct: 432 KQEDKRNKLTDMMLDDKINEEAYNKKYEELSYNISKLKNEKRMLTDNNLNQKTIKNRMCE 491 Query: 436 FYAIDLTSKNGRELCRTLAYKTFEKIIINT--DNKTCDIYF 474 +K E R + +K+I+ T D+ T + Y Sbjct: 492 IRNNIKDAKVFDEFDRVVFESIVKKVIVGTVLDDGTIEPYK 532 >UniRef50_Q041M6 Site-specific recombinase, DNA invertase Pin related protein n=15 Tax=Bacilli RepID=Q041M6_LACGA Length = 553 Score = 311 bits (798), Expect = 3e-83, Method: Composition-based stats. Identities = 76/511 (14%), Positives = 168/511 (32%), Gaps = 59/511 (11%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 + AY R S+ +SL QR +++ + ++ L Y D G+S K + A Sbjct: 18 RVAAYCRVSTDNIEQLESLENQREHYQKYISNHPNWQL-AKIYYDEGISGT--KLTKRDA 74 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 E L + I ++ +S+ RLSR + + ++ + I +I ++ Sbjct: 75 LKELLADCHNHLI---DLVVTKSISRLSRNT-TDCLRIVRELQQLNIPIIFEKEHINT-- 128 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 S + +++ A +ES + ++ + +++ SG +S P S++D Sbjct: 129 ---GAMASELFLSILSSIAQDESHSTAGNLRWAIRQR----FASGEFRVSSAPYGYSIED 181 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 V + + + IF+ + S + IAK LN V G W + + +L Sbjct: 182 GN--LVINQAEARIVREIFQQFSKGMSASRIAKGLNHKHVATKHG--GQWRSNTVINILR 237 Query: 243 NKALIGICVPSYRARGKGISE-----------IAGYYPRVISDDLFYAVQEIRL---APF 288 N G + I ++P +++ + F VQ + Sbjct: 238 NSNYTGDMLCQKTYSDDQYHRHFNQGELTQYLIEDHHPSLVNHETFNRVQVLLKEAVQKC 297 Query: 289 GISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMR--RLHRCDRPSIKR 346 I S L + C CG + + C +C ++ Sbjct: 298 HIETGSHKYQHHYLFSGKITCGNCGTIFKRQTRPNKIC--WACQRHLSSAKQCTVKAVTE 355 Query: 347 DLVDYNIINELLFNCS-------------KIQPVENKKDANETLELKIIELQMKINNLIV 393 ++ N + ++Q + +L ++ K L Sbjct: 356 VSLEAAFCNMMNKLIYSRKFLLQPLLANLQVQANSDTNGQLSSLVNQVKANDRKAETLTE 415 Query: 394 ALSVA-PEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRE---- 448 + + + L+++ + +K S +S ++F + ++ Sbjct: 416 LMQSGLLDKAIYVNQTAQLEQDTYQCREKIKQFNSNNTDSANNFENVRTLLHWCQQGQKL 475 Query: 449 --LCRTLAYKTFEKIIINTDNKTCDIYFMNG 477 + ++I++N+ + G Sbjct: 476 SGFNKAPFQDFVQQIVVNSPKEAV-FKLKCG 505 >UniRef50_D0XHM7 Putative uncharacterized protein n=1 Tax=Vibrio harveyi 1DA3 RepID=D0XHM7_VIBHA Length = 515 Score = 311 bits (797), Expect = 4e-83, Method: Composition-based stats. Identities = 146/525 (27%), Positives = 238/525 (45%), Gaps = 50/525 (9%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 MK I Y RFSS GQ GDSL RQ RL EW K N+ ++ Y D G+S FKGKHA Sbjct: 1 MKNVILYERFSSLGQKKGDSLVRQSRLCDEWCKKNNGKLINA--YVDEGVSGFKGKHAAV 58 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 GA S+ L AIE+GYI T LL+E+LDRLSRE++ A++R IL GI+++TL D V+ Sbjct: 59 GALSKILSAIENGYIERDTYLLIENLDRLSREEISTALDRFSSILRAGINIVTLMDGKVF 118 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 +S N L+ A++ RANEES KS R W KR+ +E G P WL Sbjct: 119 TPESANNLPDLMWALMTMARANEESATKSKRASSVWLSKRK-FVEGGGKPKFKTPNWLDY 177 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 D+K+ + + + LIF+L ++ +S+N +A LN+ G W S + + Sbjct: 178 DEKKQEYKLNKHAAS-VALIFELYLKGKSINRVAMDLNELKTP-PIGYSKKWSHSTVRWI 235 Query: 241 LANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLI 300 L +K G+ + +YP IS + FY Q + ++N Sbjct: 236 LDSKQTYGVLDAKTMYQ-------DDFYPAAISKETFYKAQSELNRRKNKTGRTRNDKTP 288 Query: 301 NLLRTVMKCEACGNTMIVHAV------SGSLHGYYVCPMRRL----HRCDRPSIKRDLVD 350 NLL + C CG ++ + Y +C +R C P+ + V+ Sbjct: 289 NLLTGLACCGVCGESITMQGKNHSSTGKAGNFKYLMCSTKRYSHVESHCGLPNFRYKYVE 348 Query: 351 YNIINELLFNCSKIQPVENKKD-------ANETLELKIIELQMKINNLIVALSVAPEVTA 403 I+ +L + + + KD E++ ++ +++ +I+NLI AL+V+ Sbjct: 349 -MILAVILSSIDTLPKSRDDKDNIVRIKTEIESIGEELEDIEKQIDNLIEALAVSK-SDR 406 Query: 404 IAEKIRLLDKELRRASVSLKTLK-----------SKGVNSFSDFYAIDLTSKNGRELCRT 452 IA K+ L++ + + L+ + ++++ + R + Sbjct: 407 IAAKLAQLEQNEAELKRNREALEVQYNEITLIEDDEKFEQRIRKLSVNIQNDEYRRELLS 466 Query: 453 LAYKTFEK--------IIINTDNKTCDIYFMNGIVFKHYPLMKVI 489 + YK ++ I + ++ + G V +P K++ Sbjct: 467 VLYKVIDEWRFNADGSISVQVSGNKINVSGVKGNVEISFPDRKIM 511 >UniRef50_A5KP69 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5KP69_9FIRM Length = 493 Score = 311 bits (797), Expect = 4e-83, Method: Composition-based stats. Identities = 91/503 (18%), Positives = 175/503 (34%), Gaps = 48/503 (9%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 K Y+R S+ GQ S + Q +L+ ++ K N L + +LG+S K + Sbjct: 4 KYCYGYVRVSTSGQEEL-SPDSQAKLLKDFAKKNDMIIL--QIFYELGISGRKAD--KRP 58 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F + + + P ++V R +R + + + L H +DV+++ + V Sbjct: 59 EFQKMIALAKSDK-HPVDCIIVWKFSRFARNQEESIVYKSLLKKKHNVDVLSVSEPLV-- 115 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 + P+ + +I S S V +K + A P + Sbjct: 116 ----DGPFGSLIERIIEWMDEYYSVRLSGEVTRGMTEKAKRGGYQ-----ARPPLGYKIQ 166 Query: 182 DKRTAFVPDPDRVKTIELIFKLRM-ERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 ++ V P+ + I++IF + E + IA+YLN K + IE + Sbjct: 167 ERGKPPVIVPEEAEIIKIIFDKYVNEHTGIFDIARYLNLCGFKT--SHNKPFERRSIEYI 224 Query: 241 LANKALIGICVPSYRARGKGISEIA-------GYYPRVISDDLFYAVQEIRLAPFGISNS 293 L N G+ + G P +IS +LF Q + + S + Sbjct: 225 LQNPTYCGMIRWNRTVSETNEIRPESEWIVSDGQQPAIISKELFDKAQIRYKSEYKPSGA 284 Query: 294 SKNPMLINLLRTVMKCEACGNTMIVHAVSG-SLHGYYVCPMRRLHRCDRP-SIKRDLVDY 351 + + L +MKC CG TMI V+ + Y+ C +C S+ ++ Sbjct: 285 RPSSTYKHWLSGLMKCPVCGRTMIAKTVNNQKSYCYFTCYGYSKGKCLAKTSVSSLRLEP 344 Query: 352 NIINELLFNCSKIQPV--------ENKKDANETLELKIIELQMKINNLIVALSVAPE-VT 402 ++ + + E D N + ++ + K + + A + + Sbjct: 345 AVLASIKEVLDTGNIIYRHVEPVQETSVDLNVIITEQLRKNAEKFDRIREAYRNGVDTLD 404 Query: 403 AIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGREL----------CRT 452 E R++ +E L +K + A+ +N E+ Sbjct: 405 EYKENKRMVQEEKEMLEKQLADIKPAEPTIDTSKIAMLEKVRNVYEIIESDSVDPVTKNE 464 Query: 453 LAYKTFEKIIINTDNKTCDIYFM 475 + EKII + +Y+ Sbjct: 465 ILKSVIEKIIYDRSKDELKVYYY 487 >UniRef50_A8SCA0 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SCA0_9FIRM Length = 545 Score = 310 bits (796), Expect = 5e-83, Method: Composition-based stats. Identities = 89/547 (16%), Positives = 180/547 (32%), Gaps = 84/547 (15%) Query: 2 KKAIAYMRFSSPGQM--SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 K Y R S S+ Q+ ++ E+ N + Y D G + G ++ Sbjct: 10 KVTALYCRLSKDDGSNSESLSIRTQKAMLMEYATRNGFG--NCQYYVDDG---YSGTNSD 64 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 AF E LD I G + T++ + RL R + HG+ I + D Sbjct: 65 RPAFQELLDDIREGKVA---TVITKDQSRLGRNHIETGTYMEIFFPEHGVRYIAINDGYD 121 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 N + + + I+ A + S ++K + + +++ SG +++ P Sbjct: 122 SN-EQSQMDIAPFRNIINEMYA----KDTSRKIKSALRTRKK----SGKYISSGAPFGYQ 172 Query: 180 LDD-KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNF------------- 225 D V DP+ +E I+ + E L+ IAK L+D V Sbjct: 173 KDPADHNHLVIDPNTAPVVEYIYSMAEEGLGLHRIAKRLHDEKVLKPCYYKKEMFGRFID 232 Query: 226 SGKESAWGPSVIEKLLANKALIGICVP---------SYRARG---KGISEIAGYYPRVIS 273 K W + I ++L + G + S + R + + + + +I Sbjct: 233 DEKMYDWDSAYISQVLHSPVYAGHIIYEAKPTVSMKSKKRRYIPFEERAIVPNTHEAIIP 292 Query: 274 DDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHG------ 327 D + VQ I + K N+ + +++C CG TM+V Sbjct: 293 QDRWENVQRILYSRSSSFMCDKT-DYDNIFKGIVRCADCGRTMLVKVEHRRKRNSVLDQT 351 Query: 328 YYVCPMRRLHR---CDRPSIKRDLVDYNIINELLFNCSKI-------------------- 364 +Y C R + CD +++ ++ + ++ + Sbjct: 352 FYCCSTYRKYGAKACDSHNLEARVLHEAVFADIQAHAKAAVSNREALVKKIANQMHLRVS 411 Query: 365 QPVENKKDANETLELKIIELQMKINNLIVALSVA--------PEVTAIAEKIRLLDKELR 416 K + + +I E++ L +S ++ L +++ Sbjct: 412 SDRAQHKRDLKQCKARIAEIEDLYAKLYEDVSKGLLPEKRFQMLADRYDKEQAELTEKIE 471 Query: 417 RASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMN 476 + + ++ DF EL + ++ +KI+++ K Y Sbjct: 472 QYERE-GRAEHDQLDKIQDFIDEVSKYAGITELNYKILHQLIDKILVSRAEKVDGEYVQK 530 Query: 477 GIVFKHY 483 +F + Sbjct: 531 IQIFYRF 537 >UniRef50_C2KNU8 Site-specific recombinase n=2 Tax=Actinomycetales RepID=C2KNU8_9ACTO Length = 523 Score = 310 bits (796), Expect = 6e-83, Method: Composition-based stats. Identities = 94/508 (18%), Positives = 178/508 (35%), Gaps = 60/508 (11%) Query: 11 SSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFSEFLDAI 70 S+ + S Q ++ +D+ Y D G+S KH F +D Sbjct: 36 STEMEEQTSSYEAQIDYYTTYIHSRNDWQF-AGMYCDEGISGTSMKH--REGFQTMIDDA 92 Query: 71 EHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDSLNEPYS 130 G I +L +S+ R +R V +++ ++ + + G++V +N +Y D+ Sbjct: 93 LAGKI---DLILTKSVSRFARNTV-DSLTTVRKLKDAGVEVYFQKEN-IYTFDTK----G 143 Query: 131 LIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDKRTAFVPD 190 + +++ A EES S V +K+ G IM + V D Sbjct: 144 ELLITIMSSLAQEESRSISENVTWGHRKR----FADGKIMVPYASLLGYKKGADGSLVID 199 Query: 191 PDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLANKALIGIC 250 + T+ LI++L ++ +++ I L + GKE W S + +L+N+ G Sbjct: 200 ETQAPTVRLIYQLFLDGMAISEIKTELAARKILTPRGKE-VWSTSTVRSILSNEKYKGDA 258 Query: 251 VPSY--------RARGKGISEIA-----GYYPRVISDDLFYAVQEIRLAPFGISNSSKNP 297 + + E+ G + +I+ ++ VQ G +S+K Sbjct: 259 LLQKTFTTDFLTKKMKVNEGEVPQYYVTGNHEPIIAPHIWDQVQYELSTRHGNISSAKVG 318 Query: 298 MLINLLRTVMKCEACGNTMIVHA---VSGSLHGYYVCPMRRL--HRCDRPSIKRDLVDYN 352 L T +KC CG + + + C + H C ++K + + + Sbjct: 319 ----LFSTRLKCFQCGAWYGRKTWASNTKYKYTVWQCNHKYAGQHPCSSATVKDEQIKDS 374 Query: 353 IINELLFNCS-------------KIQPVENKKDANETLELKIIELQMKINNLIVALSV-A 398 + L + + ++ + KI+EL +I LI A Sbjct: 375 FVQALNQLIARHRYESHLPQVLGDMFDTSRLEEQAAACQAKIVELTEQIEALIAENQQRA 434 Query: 399 PEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAI-----DLTSKNGRELCRTL 453 + A LD R+ +L++ + + AI DLT + E Sbjct: 435 LDQDAYQAHYTELDTAYRKTLARKASLEADIAANTAKHAAITTTLNDLTGEPVSEFHPAQ 494 Query: 454 AYKTFEKIIINTDNKTCDIYFMNGIVFK 481 + I+ D T F G V + Sbjct: 495 WSALIDHAIVGED--TIRFVFRVGEVVR 520 >UniRef50_Q46W15 Recombinase n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46W15_RALEJ Length = 589 Score = 310 bits (796), Expect = 7e-83, Method: Composition-based stats. Identities = 130/491 (26%), Positives = 211/491 (42%), Gaps = 30/491 (6%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYE--DLGLSAFKGKHA 58 M +A Y RFS P Q G S RQ L ++ +V+ + Y D G SAF G H Sbjct: 1 MPRAYNYTRFSHPSQALGQSEQRQIELCEQYCRVHGLTLVRDSEYTFLDRGRSAFLGAHL 60 Query: 59 QSGA-FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDN 117 GA S FL +E G I G+ L+ ESLDRLSR+ A++ L I+ GI V+TL + Sbjct: 61 DDGAELSRFLKLVEDGTIPAGSWLICESLDRLSRQDSWTAMKLLGGIVESGITVVTLNNG 120 Query: 118 TVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRW 177 V+ + + LI A+L + RAN ES KSSR++ +++KKR A + + T P W Sbjct: 121 EVFA--DMKDARKLIMAVLDSSRANSESSHKSSRLRQAYQKKRDAASDGKAVFTKQVPMW 178 Query: 178 LSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVI 237 L L R+ + P+ V+T+ +IF L + N +A+ LN+ F + WG S + Sbjct: 179 LKLKADRSGYDLVPEFVETVRMIFDLTIT-HGKNKVAQLLNEAGRPTFKPSVNGWGTSAV 237 Query: 238 EKLLANKALIGICV-------PSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGI 290 +L N+A++G P R R I Y+P +I + +Y Q+ Sbjct: 238 SHVLNNRAVLGEFQPMSKLDDPKRRKRKPVGEPIKKYFPAIIDETTYYRAQDAVAGR-RT 296 Query: 291 SNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHG--YYVCPMRRLHRCDRPSIKRDL 348 + ++K + N+ + V +C CG+ M + + G Y C + R C+ + R Sbjct: 297 AKATKQSVKFNVWQKVARCIHCGSPMHMVNKGRAPKGQTYIECSIGRKGLCESHKLIRLD 356 Query: 349 VDYNIINELLFNCSKIQPVENK----KDANETLELKIIELQMKINNLIVALSVAPEVTA- 403 + +L + V + + +I E + K++ + A P Sbjct: 357 HSEQVFRAILACLDSMSLVRDSGGKLAKDLAAINGRIAEQEAKLSKAVAAFDAEPSPDIA 416 Query: 404 -----IAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTF 458 + E + L + L ++ +DL S GR L + Sbjct: 417 AAVRRMRETLTELTNQREHTQGELAA--EDAIDYKEFMRRLDLESPEGRAAANALLQRL- 473 Query: 459 EKIIINTDNKT 469 K+++ D Sbjct: 474 -KVLVFADRGE 483 >UniRef50_Q3SMV6 Resolvase n=4 Tax=Rhizobiales RepID=Q3SMV6_NITWN Length = 561 Score = 310 bits (795), Expect = 7e-83, Method: Composition-based stats. Identities = 91/521 (17%), Positives = 177/521 (33%), Gaps = 68/521 (13%) Query: 1 MKKAIAYMRFSSPGQMSGD-SLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 M +A YMR S+ Q D S+ QR + W + + Y + + G SA + Sbjct: 22 MHRAALYMRVSTGRQAEHDLSIPDQRHQLQSWCRAHG--YEPAAEFVEAGASAT---DDR 76 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 F + ++ G ++V S R RE + + + H + V+++ Sbjct: 77 RPIFQQMIERACDGE-NAFDVIIVHSYSRFFREAFEQEFYL-RKLARHKVRVVSITQP-- 132 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 + NEP + +IA +S + V S K+ + +G A+ P Sbjct: 133 --VGDENEPVHAMMRKVIALFDEYQSRENAKHVIRSMKENARQGFWNG----ATAPLGYK 186 Query: 180 LDDK-------RTAFVPDPDRVKTIELIFKLRMER------RSLNAIAKYLNDHAVKNFS 226 L + + D + + LI+KL + + + K+LN + + Sbjct: 187 LVEAEKRGTKIKKKLDVDAVEAEYVRLIYKLYLYGDGTSGALGIKEVVKWLNRNGYRTRR 246 Query: 227 GKESAWGPSVIEKLLANKALIGICVPSY-----RARGKGISEIAGYYPRVISDDLFYAVQ 281 G +G + + K+L N IG + R R + P +I +F VQ Sbjct: 247 G--QTFGVAGVHKVLTNTVYIGEWQFNVTSSRTRQRKPDTEIVKIAVPAIIEPHVFEQVQ 304 Query: 282 EIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHA---VSGSLHGYYVCPMRRLHR 338 A + + LL + C C M + +G++H YY C Sbjct: 305 AQLRARSPRVVAPRLTTGPILLTGLAVCATCAGAMTLRTGTSSTGAVHRYYTCSTCARKG 364 Query: 339 ---CDRPSIKRDLVDYNIINELLFNCSKIQ---------------PVENKKDANETLELK 380 C SI D +D + L+ + + E++ L+ + Sbjct: 365 KSVCKGRSIPMDKLDGLVTEHLVERLLQPERLAVMLSSLKARRAAKAESENKRIMALQRE 424 Query: 381 IIELQMKINNLIVALSVAP-EVTAIAE-KIRLLDKELRRASVSLKTLKSK-GVNSFSDFY 437 + E ++ L + ++ + + ++ L + RA +L+ S+ + D Sbjct: 425 VSEADERLKRLYRLVEDGVTDLDEVLQGRLSQLKADRDRARAALEATTSRHRADIRIDPA 484 Query: 438 AIDLTSKNGRE--------LCRTLAYKTFEKIIINTDNKTC 470 I+ + RE + + I ++ Sbjct: 485 LIESFGRTMRENLTTGSTPFRKAYLRTLIDVIEVDDAQIRI 525 >UniRef50_Q1J4R9 Site-specific recombinase n=10 Tax=Bacteria RepID=Q1J4R9_STRPF Length = 557 Score = 310 bits (794), Expect = 1e-82, Method: Composition-based stats. Identities = 99/553 (17%), Positives = 197/553 (35%), Gaps = 74/553 (13%) Query: 2 KKAIAYMRFSSPGQM--SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 K A Y+R S +S++ QR++I + + N + Y D G F G + Sbjct: 4 KFACMYLRLSREDGDSTESNSISNQRQIIKSYARDND--FKVVAEYVDDG---FSGSNFD 58 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 F + + +E T++V+ L R R+ + K+ GI I++ DN Sbjct: 59 RPKFKKMIQDLEEKKFK---TIIVKDLSRFGRDYIESGKYLQKIFPEKGIRFISVNDNYD 115 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 +++ + + + + S +VK S + KR+ +G + A P Sbjct: 116 SENADVSDTH--LILPIRNFINDSYCRDISMKVKSSKEIKRK----NGEFIGAFAPFGYK 169 Query: 180 LD-DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSG----------- 227 D + V D + IE IF ++++ S AIA +LN S Sbjct: 170 KDSKNKHKLVVDTEVSHIIERIFNMKIDGYSSKAIADFLNSIGCVTPSKHKENSGDNHTT 229 Query: 228 ----KESAWGPSVIEKLLANKALIGICVPSYRAR------------GKGISEIAGYYPRV 271 K+S W ++ +++ NK IG+ + + I + + Sbjct: 230 GFIVKDSKWDAKMVNRIITNKVYIGVLEQGKTRKLNYKSKREVEVNEEDWIVINDSHKPI 289 Query: 272 ISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVH--AVSGSLHGYY 329 IS ++ ++ L S + ++L ++ C+ CG++M+ + +Y Sbjct: 290 ISKSIYALANKMMLRDVKQS-----ADIPHILSGMLYCKDCGSSMVRRKVKSKNGYNIFY 344 Query: 330 VCPMRRLHR-CDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDAN-----------ETL 377 +C C R SIK D + + L K + ++ + E+L Sbjct: 345 ICSHYNNKGDCTRHSIKEDYLMDMTLFALKDYLKKYNELLSQVNKLDVSKVTFNIDFESL 404 Query: 378 ELKIIELQMKINNLIVALSVAPEVTAIAEK--------IRLLDKELRRASVSLKTLKSKG 429 + + + +L + L + E+ IR ++K++ L L+ K Sbjct: 405 NSEKRKYERLRQSLYMDLEDELITSEEFERFRKNYLIKIREIEKQIATKKNILANLQEKM 464 Query: 430 VNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKHYPLMKVI 489 N D ++ + L R ++I I +N + F N + Sbjct: 465 KN--KDSLVSEIVPTDLSSLNRLTIVSFIDRIEI-GENNEINFVFNNLETVNLLKTLIKE 521 Query: 490 SAQQAISALKYMV 502 ++ K ++ Sbjct: 522 ESESKSEVKKNLI 534 >UniRef50_C0ECX6 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0ECX6_9CLOT Length = 482 Score = 310 bits (794), Expect = 1e-82, Method: Composition-based stats. Identities = 79/497 (15%), Positives = 169/497 (34%), Gaps = 46/497 (9%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYE-DLGLSAFKGKHAQ 59 M+ A AY+R S+ Q+ S + Q I + K + + Y D G+S K K + Sbjct: 9 MRVAAAYIRVSTDDQLE-YSPDSQLIEIRRYAKAHDIVIPEDYIYIEDDGISGRKTK--K 65 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 AF + + P +L+ R +R + + + L GIDVI++ + Sbjct: 66 REAFQRMIGTAKT-KPKPFDVILLWKFSRFARNREDSVVYKSMLRKQLGIDVISVSEPL- 123 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 ++ S++ +I S S V +K + + S Sbjct: 124 -----SDDKMSILIEAMIEAMDEYYSINLSEEVTRGMTEKVRRGE-----PVSIPAFGYS 173 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEK 239 + + + P+P + +F+ +A LND +++ G + + +E Sbjct: 174 IKE--KQYYPNPKTAPIVRSLFEEYAAGAGCRDLATKLNDMGIRSTRG--NPFENRTVEY 229 Query: 240 LLANKALIGICVP------SYRARGKGISEIAGYYPRVISDDLFYAVQEIRL--APFGIS 291 +L N IG+ S + + G + +++ +L+ VQ+ Sbjct: 230 ILRNPVYIGMIRWSPEGKISRNYTKSNVMVVQGSHEPIVTRELWEQVQDRLDEVKRTYPK 289 Query: 292 NSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCD-RPSIKRDLVD 350 + +L+ +++C CG+T++ + C C SI ++ Sbjct: 290 YARVRERCDFMLKGLVRCSNCGSTLVHASTGS-----LQCHSYGRGSCKVSHSITLPKIN 344 Query: 351 YNIINELLFNCS------KIQPVENKKDANETLELKIIELQMKINNLIVALSVAPE-VTA 403 +I + ++P + D N ++ +I + K++ + A + + Sbjct: 345 KIVIESIEATFRLGVFPLTVKPSKQSIDENALIQQQIQREKRKLDRIREAYENEVDTLEE 404 Query: 404 IAEKIRLLDKELRRASVSLK-----TLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTF 458 + E+ R L L+ K + + Sbjct: 405 YKANKEKILTEIERLKAQLTPTPPVDLRKKFFEKNKNSVQKLKDPTISESEKNEILRSFV 464 Query: 459 EKIIINTDNKTCDIYFM 475 + I+ N T D+++ Sbjct: 465 DHIVFNRAKGTVDVFYY 481 >UniRef50_B0PBT9 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PBT9_9FIRM Length = 522 Score = 310 bits (794), Expect = 1e-82, Method: Composition-based stats. Identities = 74/531 (13%), Positives = 159/531 (29%), Gaps = 89/531 (16%) Query: 16 MSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFSEFLDAIEHGYI 75 S+ Q+ ++A +++ + Y D G+S + + I Sbjct: 5 AQSVSIENQKEMLARYVREQG--WTLYDYYCDDGVSGTT---FDRPGLNRLVQDATDRKI 59 Query: 76 LPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDSLNEPYSLIKAI 135 +L + L RL R+ + + + G I L D + + + I Sbjct: 60 ---NLVLCKDLSRLGRDYIEAGKYTDFVFPSLGCRFIALNDGVDTLRKN-----NEMLVI 111 Query: 136 LIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD-DKRTAFVPDPDRV 194 L + + S+++K + + + P + + P Sbjct: 112 LKNVMNDLYARDTSNKIKAVKQSTFKSR----KYVGCYAPLGYRKSAEDKHILEIAPVTA 167 Query: 195 KTIELIFKLRMERRSLNAIAKYLNDHAVK-------------NFSGKESAWGPSVIEKLL 241 + IF LR++ IA LN V N G+ W ++ +L Sbjct: 168 PVVRRIFDLRLQGYGFRKIALQLNAEKVPKPRSFYYMAEGRENRRGETPYWNDVTVKTIL 227 Query: 242 ANKALIGICVPSYR------------ARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFG 289 N+ +G V + + ++ + +IS +++ AVQ + Sbjct: 228 RNEVYLGHMVQNKTGTVSYKNHKQVSKQESEWIKVENTHEPLISQEIWDAVQRM--DNHP 285 Query: 290 ISNSSKNPMLINLLRTVMKCEACGNTMI-------VHAVSGSLHGYYVCPMRRLHR---C 339 S + L +++C CG +M V + YVC C Sbjct: 286 ARGRSGKSETVALFGGLLRCMDCGASMRYMRDYRKRTTVKEPEYKAYVCNRYASGGKNAC 345 Query: 340 DRPSIKRDLVDYNIINELLFNC-----------SKIQPVENKK--DANETLELKIIELQM 386 I + ++ ++ ++ +++ E + TL+ ++ + Sbjct: 346 SSHYINQKVLTQIVLTDIRGKALWAQNSRETLRAQLLAREQNASSERTRTLQAELTAIGK 405 Query: 387 KINNLIVALSVAPEVTAI--------AEKIRLLDKELRRASVSLKTL------KSKGVNS 432 ++ L + A E + + + E R + L + S Sbjct: 406 RLPELDRLIQAAYEDKVLGRIPESVCINLLNQYEAERREKQERSRELMEQLAASRENEKS 465 Query: 433 FSDFYAIDLTSKNGRELCRTLAYKTFEKIII-------NTDNKTCDIYFMN 476 + + EL R + +KI I + + IY+ Sbjct: 466 VDAWLDMMQDYAQFEELDRPTLVRLIQKIEISERYTVDDHKERDIHIYYNF 516 >UniRef50_D2LV95 Resolvase domain protein n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LV95_BACS4 Length = 525 Score = 310 bits (794), Expect = 1e-82, Method: Composition-based stats. Identities = 91/525 (17%), Positives = 181/525 (34%), Gaps = 73/525 (13%) Query: 3 KAIAYMRFSSPGQMS-GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 KA Y+R S+ Q G SL+ Q + E+ K Y Y D G + GK+ Sbjct: 7 KAALYIRVSTEEQKKHGYSLSGQAEELKEYAKQKG--YEVFDVYSDGG---YSGKNFNRP 61 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 + + ++V +DR+SR + + ++ + Sbjct: 62 EVQRMFRDMSNNK---FDVIIVWKVDRISRSNKDVLSLIDDELKPRNMKLL----VKTCD 114 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 IDS + + L+ A E + RV +K +D +G + D Sbjct: 115 IDSSTTNGYMFIS-LLGTFAEYERAVIIERVTAGMEKVARDGEWNGGKVLG-------YD 166 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 + V + + K ++ I+ +R E IA LN K K++++ I+ +L Sbjct: 167 SEDKQLVINEEESKIVKEIYNMRAEGLGYKKIADNLNSKGKKTK--KDNSFSIPAIKLIL 224 Query: 242 ANKALIGICVPSYRA---------RGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISN 292 N+ IG V + ++ + +I +L+ VQEI+ + Sbjct: 225 ENEVYIGTKVWGKYRNWEEKRRGGKNNSPIKVENKHDAIIDIELWNRVQEIKRINNNTYS 284 Query: 293 SSKNPMLINLLRTVMKCEACGNTMIVHAVSGS----LHGYYVCPMRRLHR---CDRPSIK 345 +++N L ++KC CG ++ H YY+C C IK Sbjct: 285 TNRNFNGNLFLTGLLKCPVCGAGTVMSKTKKRNGNGYHIYYMCQNYHSKGKTVCKPNLIK 344 Query: 346 RDLVDYNIINELLF---------------NCSKIQPVENKKDANETLELKIIELQMKINN 390 +++V+ ++ + K V + L+ +I + + + N Sbjct: 345 KEIVENKVLEAIKEVICDPDLINEVITKLELEKKSGVADLTSNLALLKREIKKYKEEQLN 404 Query: 391 LIVALSVAPEV-------TAIAEKIRLLDKELRRASVSLKT-------LKSKGVNSFSDF 436 L L ++ I +++ L++ + ++ K +++ +F Sbjct: 405 LDKQLLCGLKIEHYNRVSDQIQDRLNELNQSIENIERQIERNNLNNFITKEIIIDTLKNF 464 Query: 437 YAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCD---IYFMNGI 478 +L K E + L + + + D K +F G Sbjct: 465 D--NLFEKANGEEKKLLIRSLIKNVEMEKDRKEIKHIAFWFAEGN 507 >UniRef50_A1VBU1 Resolvase, N-terminal domain n=1 Tax=Desulfovibrio vulgaris DP4 RepID=A1VBU1_DESVV Length = 511 Score = 309 bits (793), Expect = 1e-82, Method: Composition-based stats. Identities = 82/519 (15%), Positives = 170/519 (32%), Gaps = 66/519 (12%) Query: 3 KAIAYMRFSSPG--QMSGDSLNRQRRLIAEWL-KVNSDYYLDTITYEDLGLSAFKGKHAQ 59 + Y R S+ + ++L+ QR ++ S+ ++ + D G F G + + Sbjct: 6 RCAIYTRKSTDEGLEQEFNTLDAQRESAEAFITSQRSEGWVVLPEHYDDG--GFTGGNLE 63 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 A LD + G I ++V +DRLSR + + + + H + +++ Sbjct: 64 RPALKRLLDDVAEGRI---DCVVVYKVDRLSRS-LLDFSRLMDVFDKHKVSFVSVTQQFN 119 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 + ++ A E EI R K R+ G Sbjct: 120 TTHS-----MGRLTLNILLSFAQFEREIIVERTKDKVYAARRK----GKWTGGMPVLGYD 170 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGK--------ESA 231 + + + + + + + IF++ ++++SL A K L D K A Sbjct: 171 VAPEGGRLLVNEEEAEQVRGIFQIYLDKQSLIATIKELEDRGWATKRWKTRSGHERGGKA 230 Query: 232 WGPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGIS 291 + + + +LL N G V + G + ++ + + A Q F Sbjct: 231 FKLNSLHRLLTNPIFTGQVVFQ-------GAVYEGEHKPIVDLNTWQATQRTLHGNFRRG 283 Query: 292 NSSKNPMLINLLRTVMKCEACGNTMIVHAVSG--SLHGYYVC---PMRRLHRCDRPSIKR 346 N LLR ++ C ACG MI + YYVC R H+C S+ Sbjct: 284 PLGSNRYGA-LLRGLLYCSACGTAMIHTCSKRDTKTYRYYVCLTAQQRGWHQCPSKSLNA 342 Query: 347 DLVDYNIINELL--------FNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVA 398 ++ ++ + + + E + LE + + + +I L + Sbjct: 343 HDIETAVVEHIKGIGLNPAIISAVTNKATEKAQRNIMALEAEHLACEREIKKLTNEIRKL 402 Query: 399 PEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAID------------------ 440 E + L +L A +L + + + +I Sbjct: 403 TEQPIKDARDPAL-AKLAEAQQALMEKEQRMTLVKEEVRSIQHGLTSHDEVGKTLQQFEP 461 Query: 441 LTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIV 479 L + + E++ + + + + F + + Sbjct: 462 LWGTLTTQEKIKIIRLLVERVGFDGRDNSVTVTFRSQDI 500 >UniRef50_Q1Z7J0 Site-specific recombinase n=1 Tax=Photobacterium profundum 3TCK RepID=Q1Z7J0_PHOPR Length = 609 Score = 309 bits (793), Expect = 1e-82, Method: Composition-based stats. Identities = 126/470 (26%), Positives = 207/470 (44%), Gaps = 26/470 (5%) Query: 1 MKK-AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 MKK A +Y+RFS+P Q GDS RQ ++ + + + D G+SAFKG++ Q Sbjct: 1 MKKIAYSYLRFSTPRQAKGDSYRRQMEAARKYAEEKDLSLQEDA-FNDFGISAFKGRNVQ 59 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 +GA +FL ++ G I G LLVE+ DRLSR + EA+ +L+ ++ GI V+TL D + Sbjct: 60 NGALGDFLTLVQDGQIPKGAYLLVENHDRLSRTEPEEALHQLQSLVRAGIVVVTLHDGEM 119 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIM-TASCPRWL 178 Y ++ L+K+I+ +RA+ ES IKS R K W+K+RQD+L++G + + P WL Sbjct: 120 YKRGEMD-VMRLMKSIIYMERAHNESMIKSQRGKSIWEKRRQDSLQTGKVCRASRLPSWL 178 Query: 179 SLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIE 238 + + V D D+ + + L+FK IA+ LND V F W +VI Sbjct: 179 KWEGE--QVVIDEDKAEAVRLMFKWCAGGAGYQTIARRLNDTRVPTFRT-GVEWRAAVIA 235 Query: 239 KLLANKALIGICVPSYR----ARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSS 294 +L N+A IG + R I YYP ++S F AVQ S Sbjct: 236 AILKNRAAIGEFQYHQKNSEDKRIPIGEPINNYYPSIVSVSSFQAVQSTIRKRDNHSGQF 295 Query: 295 KNPMLINLLRTVMKCEACGNTMIVHAVSGSLHG-----YYVCPMRRLHR--CDRPSIKRD 347 NL +++KC CG+ M V HG ++VC C Sbjct: 296 SKGRAHNLFTSLIKCGNCGSPMTVATKGRKTHGSPASTHFVCTRASSGGGECLNLQWDSS 355 Query: 348 LVDYNIINELLFNCS-------KIQPVENKKDANETLELKIIELQMKINNLIVALSVAPE 400 +++ + + + L+ I Q + ++ A+ Sbjct: 356 VIERHFKQAFPLFMDHYTRGDTDLDLTRKVNEHVSELQRDIELKQEALEYIVSAIEQGQG 415 Query: 401 VTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFY-AIDLTSKNGREL 449 V + L+ E+ ++ ++++ + D ++ K + L Sbjct: 416 VQVFVSRAAALEAEIIGIREQIEDVRTQALPKTEDRAVRLERVIKLEKVL 465 >UniRef50_C6QVK4 Resolvase domain protein n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QVK4_9BACI Length = 482 Score = 309 bits (793), Expect = 1e-82, Method: Composition-based stats. Identities = 86/482 (17%), Positives = 165/482 (34%), Gaps = 47/482 (9%) Query: 3 KAIAYMRFSSPGQ-MSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 + + Y R S+ Q G SL Q+ + + + Y D G + K+ Sbjct: 2 RCVMYRRVSTDMQKEEGFSLEAQKMRLEAFALSQG--WTIVDDYCDDG---YSAKNMDRP 56 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 A + ++ ++V LDRL R V + + LK++ + + + + + Sbjct: 57 ALQRLIKDMQQKK---FDVVIVYRLDRLVRS-VLDLHKLLKIMQKYDVMFKSATE----S 108 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 ++ L I+ A A E E + RV + ++ + +G A P L Sbjct: 109 FETTTANGRLFITIV-ATIAEWERETIAERVFENMLERSKTGQRNG----APAPYGYDLV 163 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 D + + K + IF+ + IAK LN VK G W + +L Sbjct: 164 D--GELRINEEEAKWVRFIFEKY-KTHGSQNIAKQLNQRGVKTKKG--EMWSDFSVRYVL 218 Query: 242 ANKALIGICVPSYRARGKGI--------SEIAGYYPRVISDDLFYAVQEIRLAPFGISNS 293 N G +YR+ K + +IS + F VQE+ + ++ Sbjct: 219 RNPIYAGYIRWNYRSMSKQKLGGQPVVTPIKQENFVPIISKETFQEVQELLQNRYNMAFR 278 Query: 294 SKNPMLINLLRTVMKCEACGNTMI---VHAVSGSLHGYYVCPMR-RLHRCDRPSIKRDLV 349 S N V +C CG + SG ++ YY C R + CD +I + + Sbjct: 279 SDN---HYPFSGVARCAKCGKSFTGAQRKRKSGGVYRYYKCQGRFKFGNCDVQTIAEEAI 335 Query: 350 DYNIINELLFNCSKIQPVENKKDANET----LELKIIELQMKINNLIVA-LSVAPEVTAI 404 + + L VE + E +E ++ +L+ + + + Sbjct: 336 EKAFLEALHIPEKLELEVETNESEKELDTDFIEKQLQKLKGRKERIKELYIEGEIPKDEY 395 Query: 405 AEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKN---GRELCRTLAYKTFEKI 461 ++++ + + L + + ++ + E + FE I Sbjct: 396 NKRMQEIAIQEMELYELLNEYEEEASLEEIKTVLENIKKEWHNLSYEAKKYAIRSLFEYI 455 Query: 462 II 463 I Sbjct: 456 TI 457 >UniRef50_C0ESV4 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ESV4_9FIRM Length = 566 Score = 309 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 81/538 (15%), Positives = 181/538 (33%), Gaps = 75/538 (13%) Query: 4 AIAYMRFS--SPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 A Y R S S +++ Q L+ ++K D + Y D +S G + + Sbjct: 33 AALYARLSYESEKNRERNTIETQMVLLHNFVKEQKD-IVVAKEYYD--IS-KTGTNFERD 88 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F+E + I+ G I ++V+ L RL R V ++ + I++ D+ Sbjct: 89 GFNEMMQDIKEGNI---DCVIVKDLSRLGRNYVEAGSYIERVFPFFNVRFISVNDHYDSF 145 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 D ++ + + S + +++ S++ + +G + D Sbjct: 146 RDDIS-----LLISMSNVYNEFYSRDLAKKIRSSYRT----SWANGEFPSGQMAYGYEKD 196 Query: 182 DKR-TAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKE----------- 229 +PDP ++ IF+ ++ + IA+ LN + Sbjct: 197 KDNPHQLIPDPVAAPVVKKIFQYFIDGMTYAEIARKLNADGYLCPKAYKLDKAGKANEKS 256 Query: 230 --SAWGPSVIEKLLANKALIGICVPS------------YRARGKGISEIAGYYPRVISDD 275 W + K+L N+ G V + + + I + ++S Sbjct: 257 ATWTWSGGTVHKILENQYYAGDSVHNQFTNDSWAAQRQKMNQKEEWIIIKNTHEALVSRK 316 Query: 276 LFYAVQEIRLAPFGISNSSKNPMLINL-----LRTVMKCEACGNTMIVHAVSGSLHGYYV 330 F VQE N ++ N+ + + C CG TM ++ + H + Sbjct: 317 DFDEVQEKIGHIVKRVNEARKSNGNNVRDFNFFKQKIVCADCGKTMYLYGKTKGNHRRFY 376 Query: 331 CPMRRLH-RCDRPSIKRDLVDYNIINELLFNC-----------------SKIQPVENKKD 372 C +LH +C SI V+ ++ + + I+ + Sbjct: 377 CGNNKLHGKCTPHSITDLEVNDYVLRVIRAHINVYVENVDLIRRLNQRQESIKKYDVFNR 436 Query: 373 ANETLELKIIELQMKINNLIV----ALSVAPEVTAIAEKIRLLDKELRRASVSLKTLK-- 426 + ++ ++ + L + A + +++ +KE++ L + Sbjct: 437 EIKKCRKELEKVAVHRERLFEDYVCRIIDAEQYETFSKQDAETEKEIQNNMEILLKHQVG 496 Query: 427 -SKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKHY 483 K ++ ++ + +N R L + + EKI I+ + + + + + Sbjct: 497 YEKNFHTEEEWETLINKYRNTRTLTKEMVNAFVEKIEIHESG-SITVRLVYDDMLEEL 553 >UniRef50_C7HAC5 DNA integration/recombination protein n=4 Tax=Faecalibacterium prausnitzii RepID=C7HAC5_9FIRM Length = 528 Score = 309 bits (792), Expect = 2e-82, Method: Composition-based stats. Identities = 84/515 (16%), Positives = 181/515 (35%), Gaps = 51/515 (9%) Query: 4 AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAF 63 A+ Y R+S+ Q +S+ Q R + + N + Y D +SA K F Sbjct: 3 AVIYARYSTDSQRE-ESIEGQIRECTAYAEKNG--FTVVKHYIDRAVSA---KTDNRPQF 56 Query: 64 SEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNID 123 + + E G ++V LDR +R + A + + + +G+ +++ + Sbjct: 57 QQMIKDSERG---IFDVIIVWKLDRFARNRYDSARYKTQ-LKRNGVKLVSATEVI----- 107 Query: 124 SLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDK 183 P +I ++ A S S +V + + +G + P +D + Sbjct: 108 -SAGPEGIILESVLEGYAEYYSADLSEKVVRGMTENALKGIYNG----GTIPFGYMID-E 161 Query: 184 RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLAN 243 + PDP +E F+ + ++ + +L H +KN G E + I+++L+N Sbjct: 162 TRHYQPDPLLAPYVEQTFQKYADGATMTDLRDWLKAHNIKNSMGGE--MSYNTIQRMLSN 219 Query: 244 KALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLL 303 + IG P ++S++LF VQ+ + + I LL Sbjct: 220 RRYIGELRL-------RDVVQPNAIPALVSEELFNKVQKKLAKN-KKAPARHKAEEIYLL 271 Query: 304 RTVMKCEACGNTM---IVHAVSGSLHGYYVCPMRRLHRCDRPS-IKRDLVDYNIINELLF 359 T + C CG M + +G ++ YY C + + +++ ++ ++NE + Sbjct: 272 TTKLYCGKCGALMFGESGVSHTGKMYTYYKCAAAKKKKTCDKKAVRKQWLEDLVVNETMK 331 Query: 360 NCSK-----------IQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTAIAEKI 408 ++ + E ++ E ++ I N++ A+ + ++ E++ Sbjct: 332 LVEDDASMNAIIVKVMELQNQESTDLPIYEKQLKETEVGITNMLNAIQMGILTSSTKERL 391 Query: 409 RLLDKELRRASVSLKTLKSKGVNSFSDF-----YAIDLTSKNGRELCRTLAYKTFEKIII 463 L+ + + + + +F E + L I + Sbjct: 392 EALEDQRKELQARIAEERLAKPKMKEEFVRFWLLRFRKLDMTQPEQRQALVDTFINAIYL 451 Query: 464 NTDNKTCDIYFMNGIVFKHYPLMKVISAQQAISAL 498 D + G + +SA Sbjct: 452 YDDKVLITFNYKEGTETVAFGEAVKAEKSSDMSAR 486 >UniRef50_B8R885 Gp20 n=2 Tax=Bacillus phage TP21-L RepID=B8R885_9CAUD Length = 460 Score = 309 bits (792), Expect = 2e-82, Method: Composition-based stats. Identities = 80/477 (16%), Positives = 158/477 (33%), Gaps = 31/477 (6%) Query: 3 KAIAYMRFSSPGQMS-GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 K Y R S+ Q G SL Q + + + + Y D G + GK+ Sbjct: 2 KCAIYRRVSTDEQAEKGFSLENQLLRLQAFAESQG--WEVVHDYMDDG---YSGKNMNRP 56 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 L ++ +LV LDR +R V + + L++ H +D + ++ Sbjct: 57 QIKRMLHDLKSNK---FDIVLVYRLDRFTRS-VKDLNDLLEVFKEHEVDFKSATESIDTA 112 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 + + ++ A E E S RVK +KK+ + G I T P +++ Sbjct: 113 TAT-----GRMILNMMVSTAQWERETISERVKDVVRKKK----DLGLISTGYPPYGYAMN 163 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 D P V+ ++ +F+ + I+K LN+ + +G + W S ++ Sbjct: 164 D--GVISQVPHEVEIVKFVFEK-AKVYGFQKISKLLNEQGLVTRNG--TKWLISTASRIA 218 Query: 242 ANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLIN 301 N G + Y VI+ + V + +K + Sbjct: 219 HNPFYSGEMRYKRDGETSTVPINVEGYEPVITKEEHKEVLKAIKKRNRNQTRAK-SNEVY 277 Query: 302 LLRTVMKCEACGNTM--IVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINELLF 359 ++ C CG+ M + G + YY C H C+ I+ + +D + Sbjct: 278 PFSGIVLCPECGHPMKGTRVSSRGYYYKYYRCDRASDHFCNGKLIRYEKLDKAFAEYIHD 337 Query: 360 NCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVA-PEVTAIAEKIRLLDKELRRA 418 + ++ + ++ +I + KI L + L++++ Sbjct: 338 AFQIDRIEIKEETNTKDIQREIKRCKSKIERLKDLYVDGDISKKKYKNDVGELNEKIYDL 397 Query: 419 SVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCR---TLAYKTFEKIIINTDNKTCDI 472 L + ++K + L+ G F+ I + I Sbjct: 398 EQKLLSAENKISHDHIRENLKRLSEFWGLIDDNTKMESIRGVFDTITVEIQGNDVVI 454 >UniRef50_D0LLL4 Resolvase domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LLL4_HALO1 Length = 525 Score = 309 bits (792), Expect = 2e-82, Method: Composition-based stats. Identities = 82/520 (15%), Positives = 174/520 (33%), Gaps = 70/520 (13%) Query: 3 KAIAYMRFSSPG--QMSGDSLNRQRRLIAEWLKV--NSDYYLDTITYEDLGLSAFKGKHA 58 + Y R S+ M ++L+ QR +++ + + L Y+D G F G + Sbjct: 11 RCAIYTRKSTSENLDMDFNTLDAQREAGEIFVQSQAHQGWELLPEHYDDGG---FTGGNM 67 Query: 59 QSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNT 118 + A L IE I ++V +DRLSR + A ++ G+ ++ Sbjct: 68 ERPALQRLLADIEADKI---DCVVVYKVDRLSRSLLDFAR-MIQAFEKQGVSFVSTTQQF 123 Query: 119 VYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWL 178 P + L+ A E E+ S R + R+ G + Sbjct: 124 NTAT-----PIGRLTLHLLLSFAQFEREMISERTRDKMAAARRR----GKWVGGPPVLGY 174 Query: 179 SLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFS--GKESAW---- 232 ++D P+ + + F + + RS+ A+ + + + + W Sbjct: 175 AIDRDLRRLEVVPEEAEQVRAFFGMYLRMRSVGAVTRQADAFGWRKKRYQTRAGKWVGGG 234 Query: 233 --GPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGI 290 + + ++L N+ G V G + ++ D++F VQ I Sbjct: 235 RLDENAVHRVLRNRTYTGCVVYKGEVHA-------GEHDAIVGDEIFAQVQAILDTKRCG 287 Query: 291 SNSSKNPMLINLLRTVMKCEACGNTMI---VHAVSGSLHGYYVC---PMRRLHRCDRPSI 344 + +L+ V+ C CG+ M SG+++ YY C R + C P + Sbjct: 288 RGPRRQRNFAYILQGVLFCA-CGSRMTTVNGTGRSGTVYRYYRCLAQTKRPTNGCSHPRV 346 Query: 345 KRDLVDYNIINELLFNCSKIQPVEN--------KKDANETLELKIIELQMKINNLIV--- 393 ++ I+ +L C+ + K+ +++ L + +Q ++ L Sbjct: 347 PAAEIEPVIVEKLRELCNDAAVSDEVARRLRGGKEQSSQALTNERAVVQSYLDELNTEAR 406 Query: 394 ------ALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGR 447 S A++E++ ++ + + L L + ++ R Sbjct: 407 ELLGFARASEGKASRAVSERLSEIELQRDAERLRLAELDERLRGLNEAVGRVEAALDLLR 466 Query: 448 -----------ELCRTLAYKTFEKIIINTDNKTCDIYFMN 476 E + E++ +N + + Sbjct: 467 GFSEIWEMLVPEERCDVVKLLVERVDVNVPEGELRLTLHD 506 >UniRef50_C1XY58 Site-specific recombinase, DNA invertase Pin n=2 Tax=Meiothermus RepID=C1XY58_9DEIN Length = 515 Score = 309 bits (792), Expect = 2e-82, Method: Composition-based stats. Identities = 100/521 (19%), Positives = 188/521 (36%), Gaps = 68/521 (13%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 + Y R S+ Q+ SL Q+ ++ W V Y TY D G + G A Sbjct: 17 RCALYTRVSTEEQVERYSLEAQQEVLTRWAGVLG--YEVAATYTDPG---YSGAQEDRPA 71 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 + L + G + +LV LDRL+R KV A + ++ + G+ +++ + NI Sbjct: 72 LTRLLADAQEGRFV---VVLVYRLDRLAR-KVRLAYDLIERLERCGVGLMSYSEP---NI 124 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 ++ + I+ A A E + + R +L K + G + P +++D Sbjct: 125 NTTTSIGKAVLGIM-AVFAEWERDTFAERSRLGMHKAARM----GKYLGGIVPYGYTVED 179 Query: 183 KRTAFVPDPDRVKTIELIFKLRME-RRSLNAIAKYLNDHAVKNFSGKESA---------- 231 P P+ ++ +F E S +A+ LN + +E Sbjct: 180 --GRLAPLPEEAAVVQQMFAWVAERGWSTERVAQELNRLGIPPKYRREGRGVRGKRTAGV 237 Query: 232 WGPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGIS 291 W + ++L N+ IG V R R ++ P ++ LF A QE Sbjct: 238 WRGGGVLRILKNRTYIGEYVYGKRTRKPQPELVSVPVPPLVEPVLFEAAQEQLSRNA--L 295 Query: 292 NSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLH--------RCDRPS 343 + +N + LL+ +++C CG + A GYY C R RC P Sbjct: 296 FALRNARSVYLLKGLIRCGMCGRAYVGSA------GYYACVGRTNRQASPIPEMRCTAPH 349 Query: 344 IKRDLVDYNIINELLFNCSK--------IQPVENKKDANETLELKIIELQMKINNLIVA- 394 ++R ++ I +++ I + + LE ++ L L+ Sbjct: 350 VRRGELEERIWHDIRSFLLNPGEALQAFINEESPESNEVSLLERRLQALLEARARLLDLY 409 Query: 395 LSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAI-----------DLTS 443 L E ++ LD +R VS++ + + + A+ D Sbjct: 410 LEGGVEKETYYARLEDLDTRVREVQVSVEAARQRSIAERQRKEALHSLESLSARLRDRID 469 Query: 444 KNGRELCRTLAYKTFEKIIINTDNK--TCDIYFMNGIVFKH 482 + E + +A + E + + ++ + G + H Sbjct: 470 RLTPEEKQAVARELVEGVTVRPGKGEVEVEVRYRFGQIAPH 510 >UniRef50_C5D538 Recombinase n=2 Tax=Bacillaceae RepID=C5D538_GEOSW Length = 498 Score = 308 bits (790), Expect = 3e-82, Method: Composition-based stats. Identities = 97/519 (18%), Positives = 184/519 (35%), Gaps = 69/519 (13%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 K Y+R S+ + +S Q++LI +L N Y Y D G + Sbjct: 2 KVAGYIRVSTNKEGQKESPENQKQLILNFLAEN--QYDLYDFYTD----VETGTTDKREG 55 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 + + E+ ++ + L RL R V + ++ G+ +ITL D V Sbjct: 56 LKKLIRDAENKQ---FDIIVAKELSRLGRN-VELLYQLKRIAETKGVRLITL-DGRVDTQ 110 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 D + L A ES+ S R+K + K + SG M + P L D Sbjct: 111 DLSKQT----MFGLYAWVYESESQRISDRIKSVFHMKYK----SGKFMGSIAPYGYKLQD 162 Query: 183 KRTAFVP-DPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNF---SGKESA---WGPS 235 + + D V+ + IF +E + IA+YL V SGK +A W + Sbjct: 163 GK--LIIRDDYTVEVVREIFNKYLEGWGHDKIARYLTKKKVPTPAQVSGKSNAGLYWQGT 220 Query: 236 VIEKLLANKALIGICVPSYRARGK------------GISEIAGYYPRVISDDLFYAVQEI 283 I+K+L+N +G V + + + +IS ++F Q++ Sbjct: 221 TIKKILSNPHYVGDLVQNRETSTNITNKKRKVNTQNEWIIVPNTHEPIISREVFEQAQKL 280 Query: 284 RLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHR---CD 340 + K +L ++ C CG +M Y+C H C Sbjct: 281 LESKAWK-GRGKTKAQKHLFTNILYCADCGASMWYRHNRKG----YICGNYAKHGNIACS 335 Query: 341 RPSIKRDLVDYNIINELL---FNCSKIQPVENKKDANETLELK----IIELQMKINN--- 390 +IK + I+ +L + ++ K+ L+ K + ++ +I Sbjct: 336 HHAIKEQQLIETILTDLKGIYESFERLDTENQIKNKVHELQKKNAIRLQTIEKQIQKQMD 395 Query: 391 -----LIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNS-----FSDFYAID 440 L + + + ++ +L++ + T+K V+S S Sbjct: 396 LKRNALQKFIGGDISKEDYHDFVSMIQDKLQQLEIEKSTIKKAMVDSQSTTDLSTIRKQL 455 Query: 441 LTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIV 479 + + L + + E+I ++ +N+ IY+ + Sbjct: 456 DEFLSFQTLTTEMVLRFIERIEVD-NNQNVKIYYKFAPI 493 >UniRef50_C7RGX1 Resolvase domain protein n=12 Tax=Firmicutes RepID=C7RGX1_ANAPD Length = 606 Score = 308 bits (790), Expect = 3e-82, Method: Composition-based stats. Identities = 86/555 (15%), Positives = 190/555 (34%), Gaps = 67/555 (12%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 +K+ AY R S+ + +S Q +K N ++ L Y D + + Sbjct: 25 LKRVAAYCRVSTDSKDQLESYKSQVDYYTNLIKNNKNWTL-AGIYADEATTGTTAT--KR 81 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 F + ++G I ++ +S+ R +R + + ++ ++L+ + + V+ +N Sbjct: 82 ADFMRLISDCQNGDI---DMIITKSISRFARNTL-DTLKYVRLLKENNVGVVFEEEN--- 134 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 ID+L L+ IL + A +E E S+ VK K K + G ++ Sbjct: 135 -IDTLTMDGELLLTIL-SSVAQQEVENTSAHVKKGLKMKMEK----GELIGFQGCLGYDY 188 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 D + + + K + IFK +E + I + L + GK + W + + + Sbjct: 189 DPITKSISINEEEAKIVRYIFKRYLEGNGGSVIGRELEEQGYLTPRGK-TKWSDTTVLGV 247 Query: 241 LANKALIGICVPSYRARGKGISE-------------IAGYYPRVISDDLFYAVQEIRLAP 287 + N+ IG + I++ I ++ +IS + F QEIRL Sbjct: 248 IKNEKYIGDILMGKTFTVDPITKRRLANFGESDKYHIENHHEAIISKEDFEKAQEIRLRR 307 Query: 288 -------FGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSG---SLHGYYVCPMRRLH 337 + ++++C CG + + C Sbjct: 308 AQNRNTIANKDRKREKLSRQYAFSSMLECGFCGEILSRRTWHTSSIYKKINWQCVKSTKK 367 Query: 338 R---CD-RPSIKRDLVDYNIINELLFN-------CSKIQPVENKKDANETLELKIIELQM 386 C I+ ++ + + ++ +ETL + +L+ Sbjct: 368 GKKYCPHSKGIQEAAIEKAFVESYRQLCHADSTIIDDFLKIVEEEINDETLVKDLKKLEN 427 Query: 387 KINNLIVALSVAPEV---TAIAEKI------------RLLDKELRRASVSLKTLKSKGVN 431 ++N +I ++ +I E++ L E + +++K + Sbjct: 428 QLNRIISQERKLVDLHLEDSIDEEVYAKKYKKLTKQKEELLDEKKTLELTIKD-EDSIKE 486 Query: 432 SFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKHYPLMKVISA 491 F + + E RT+ +K+++ +K ++ + + + + Sbjct: 487 RLKQFKKVLENREIIEEFNRTVFESIVDKVVVGRIDKDGTVHPYDLTFYFKTGVKDSQDS 546 Query: 492 QQAISALKYMVDGEI 506 K D +I Sbjct: 547 NNFKDKRKNAKDNDI 561 >UniRef50_C0ESV5 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ESV5_9FIRM Length = 524 Score = 308 bits (790), Expect = 3e-82, Method: Composition-based stats. Identities = 86/536 (16%), Positives = 183/536 (34%), Gaps = 78/536 (14%) Query: 4 AIAYMRFSSPG-------QMSGDSLNRQRRLIAEWLKVNSDYYL-DTITYEDLGLSAFKG 55 Y+R SS + +S++ QR LI E++K ++ + Y D G + G Sbjct: 7 IAVYIRLSSEDNDVDGSIKAESNSVSAQRMLINEFIKKQDEFTNCPVVEYVDDG---YSG 63 Query: 56 KHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLC 115 + F ++ + G I ++++ R R+ + K++ GI +I++ Sbjct: 64 TNFNRPGFQRMVEDAKAGRIKS---IVIKDFSRFGRDYLEVGNYLEKILPVLGIRIISIN 120 Query: 116 DNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCP 175 D +I+S + A+ A S S +V+ + K + +G M A Sbjct: 121 DGFD-SINSSGFTGGMSVALKNMLNA-MYSRDLSRKVRSAMKTHAK----NGEYMPAFPK 174 Query: 176 RWLSLD-DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFS-------- 226 D + + V DP+ + ++LIF + + ++ IAK+LN+ V Sbjct: 175 YGYIKDPEDKHHLVIDPEAAEIVKLIFTMAADGKTKGQIAKHLNETHVLTCREYMCRKGI 234 Query: 227 -------GKESAWGPSVIEKLLANKALIGICVPSYRA------------RGKGISEIAGY 267 ++ W + I +L N+ +G + + + + + Sbjct: 235 KMHRENEKEKKLWSVTTISDMLKNEVYLGKIIWNKKRVARTGSNKLVSNDKEEWIVVENA 294 Query: 268 YPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHG 327 + +ISD+LF E + + + C CG + + Sbjct: 295 HEPIISDELFQKANEKAFTNQKRVLTKRGVACP-----IFFCPTCGRRLGFTSRETG--- 346 Query: 328 YYVCPMRR---LHRCDRPSIKRDLVDYNIINE-----------LLFNCSKIQPVENKKDA 373 Y C L C + R + +++ L S+ K++ Sbjct: 347 -YRCMQAHISGLSGCAESKMDRKEAEETVLDAARNMAQLISENLEKKKSEWHKTILKEEN 405 Query: 374 NETLELKIIELQMKINNLI-VALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGV-- 430 TLE + L + L S + E++ + ++ + L+++ Sbjct: 406 IATLESEKKRLSSRKMKLYSDYRSEVLDKEGYMEELEKTTSRISEITLQIAELENEIAVA 465 Query: 431 ----NSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKH 482 + ++ ++ + K EK+ I + + M+ I +K Sbjct: 466 KKKCDEATEKEMEVNEIAALQDFDKIQLSKIIEKVFIYEPGRMEISWKMDDIFYKE 521 >UniRef50_UPI0001C3787A resolvase domain protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C3787A Length = 575 Score = 308 bits (790), Expect = 3e-82, Method: Composition-based stats. Identities = 91/566 (16%), Positives = 185/566 (32%), Gaps = 94/566 (16%) Query: 1 MKK-AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 M K + Y R S+ + +L Q L+ + ++ +Y D G++ K + Sbjct: 9 MPKNVVIYARVSTEHEAQLSALENQLDWYKPLLEQHPEWTFV-RSYVDEGITGTSAK--K 65 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 F + L ++G +L + R +R V + + G++V + DN Sbjct: 66 RPQFMQMLSDAKNG---DFNLILTREVSRFARNTVDTLQYT-RDLKRLGVEVFFINDN-- 119 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 I + + L I+ A A +ES S RVK + ++E+G + Sbjct: 120 --IRTFDGDGELRLTIM-ATLAQDESRKTSIRVKSGQQT----SMENGVYYGNGNILGYN 172 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEK 239 V DP++ KT+ I+ ++ + I L V GK + W S I K Sbjct: 173 RVG--KELVIDPEQAKTVRKIYDWYLDGMGVRQIQFELEKEGVLTAMGK-TRWYESNISK 229 Query: 240 LLANKALIGICVPSY--------RARGKGISEI-----AGYYPRVISDDLFYAVQEIRLA 286 +L N GI + + EI G + +++ + F VQEI + Sbjct: 230 ILKNPFYAGILEYHKQFTPDFLEQKKINNFGEIDRLRVDGRHEPIVTLEEFNRVQEIMES 289 Query: 287 PFGISNSSKNPMLI-------NLLRTVMKCEACGNTM---IVHAVSGSLHGYYVCPMRRL 336 + ++K ++ ++ C CG T + H S Y+C + Sbjct: 290 KRLKNPANKTGRKEKGKKPVSDVWCRLLVCS-CGCTFNRKVWHTTSKGTQYGYMCYSQIR 348 Query: 337 HR---------------CDRPSI------------------KRDLVDYNIINELLFNCSK 363 + C I D + L + + Sbjct: 349 NGTIRTRLKKGLPTEGICTSQMIPGWKLQFMAKNLFREFLRNTDRILDIAEEMLEKHIND 408 Query: 364 IQPVENKKDANETLELKIIELQMKINNLIV-ALSVAPEVTAIAEKIRLLDKELRRASVSL 422 + E+ + + ++ +L+ +++ LI +D ++ + Sbjct: 409 EEITEDNTELIAQKKAELEKLEKRLSKLISMRADDEITKEQFMNMKSEVDTQIASLQEQI 468 Query: 423 KTL-------KSKGVNSFSDFYAIDLTSKN-------GRELCRTLAYKTFEKIIINTDNK 468 L ++ V +++ + + ++ + EKI++ + Sbjct: 469 CELSPTEKVTETSDVPDYNERITLLRYALERYTNFDSDEDIPEAVIEAFVEKIVV--NEN 526 Query: 469 TCDIYFMNGIVFKHYPLMKVISAQQA 494 + D Y K V ++A Sbjct: 527 SFDWYLHFSGDDKTPKKCNVEGDKKA 552 >UniRef50_D2BGC7 Resolvase domain protein, PinR type n=2 Tax=Dehalococcoides RepID=D2BGC7_DEHSV Length = 563 Score = 308 bits (789), Expect = 3e-82, Method: Composition-based stats. Identities = 79/507 (15%), Positives = 162/507 (31%), Gaps = 52/507 (10%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 KK Y R SS Q S+ Q + + E+ N Y Y+D S Sbjct: 27 KKVAIYARVSSERQDIDLSITAQLKALREYASRNG--YYVVKEYKDEAESGRS---IDRP 81 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F E + +LV L R +R + I + L+ HG+ VI++ + Sbjct: 82 GFKEMVVTARQ-KPPQFGAILVWKLSRFARNREDSIIYK-SLLRRHGVQVISINEPVE-- 137 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 + P + +I S S V ++ G R D Sbjct: 138 ----DTPSGRLLEGIIEVIDEFYSANLSQDVTRGMRESASRGFYPGGPPPYGYRRVKVQD 193 Query: 182 DK--RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEK 239 R PDP+ ++ IF+ + + + I + LN + K W + + Sbjct: 194 GGIQRVKLEPDPETAPVVDRIFQECVADKGMIEICRGLNGDGLTTR--KNKRWSKTSVAT 251 Query: 240 LLANKALIGICVP-----SYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSS 294 +L N+ +G + ++ + + + ++ + F Q Sbjct: 252 VLKNEVYLGTLIWGEVSTNHNPNRLPVIRVENAWTPIMDPETFKKAQLKLAERAPKITHP 311 Query: 295 KNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHR---CDRPSIKRDLVDY 351 + +L +++C+ C ++ HAV YY+C R C P + ++ ++ Sbjct: 312 RVVHSEYILSGLVRCKNCDAALVGHAVKSGKFFYYMCGNARKRGRGLCPTPLLPKERIEN 371 Query: 352 NIINELLFNC---------------SKIQPVENKKDANETLELKIIELQMKINNLIVALS 396 +I+ + Q + + E + ++ +++ ++ L AL Sbjct: 372 FMIDRIKRYILTDENLTELIKLTNEELAQQCQIESGRLEAINSELEDVEGRLVKLYNALE 431 Query: 397 VAPEV-TAIAEKIRLLDKELRRASV---------SLKTLKSKGVNSFSDFYAIDLTSKNG 446 +A +I+ L ++ KT++ D+ + Sbjct: 432 TGEFKGGELAPRIKALFEKKTELEQAKCGAEDTLKYKTIEMPNPGVIKDYVQDLRNTIEE 491 Query: 447 REL--CRTLAYKTFEKIIINTDNKTCD 471 +T E+I ++ Sbjct: 492 SNFISKKTFLRSFIERIEVDEKEVKVI 518 >UniRef50_D1PK23 Site-specific recombinase, resolvase family n=3 Tax=Bacteria RepID=D1PK23_9FIRM Length = 535 Score = 307 bits (788), Expect = 5e-82, Method: Composition-based stats. Identities = 82/538 (15%), Positives = 165/538 (30%), Gaps = 78/538 (14%) Query: 4 AIAYMRFSSPGQ-------MSGDSLNRQRRLIAEWLKVN-SDYYLDTITYEDLGLSAFKG 55 Y+R S + DS+ QR LI +L + + + D G + G Sbjct: 7 IGIYIRLSMADEDTGYGSKAESDSIGNQRMLINRFLDNHLELSHCQRSEFADDG---YTG 63 Query: 56 KHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLC 115 + F++ ++ ++ G I + V+ R SR+ + G+ I++ Sbjct: 64 TNFHRPQFTQMMEKVKRGEI---NLICVKDFSRFSRDYIETGNYLECTFPFMGVRFISIN 120 Query: 116 DNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCP 175 D D ++ ++ + S+ S + + + + G + P Sbjct: 121 DGYDS--DDYKGTTGGLEVVMRSIIYAAYSKDLSVKTTSAKIQMMKQ----GKYVGGYAP 174 Query: 176 RWLSLDDK-RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGK------ 228 L R DP+ I IF+ +E + + IA+ LND + Sbjct: 175 YGYVLHPTIRNKLAVDPEAADVIRRIFREALEGSNTSQIARSLNDDGIPTPGQYFKSKHP 234 Query: 229 ----------ESAWGPSVIEKLLANKALIGICVP---------SYRARGKGISEIAGYYP 269 + +W ++ +L N G V S + + G + Sbjct: 235 DKKKFSNMSEKISWETVMVYNILKNLVYTGTLVSRKMKSCGVGSKKRVVNEPIIVEGTHE 294 Query: 270 RVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYY 329 +IS + F Q++ G + L+ +++C C M + Y+ Sbjct: 295 AIISKEDFELAQKVI---RGGGRNPTRKQHDYPLKGLVRCGNCKRAMTRRKNKAGI-RYF 350 Query: 330 VC---PMRRLHRCD-RPSIKRDLVDYNIINELLFNCSKIQPVENKK-------------- 371 C C S ++ + + L + Q + Sbjct: 351 QCIHSVNNGNTDCPVGRSFPEMDIEKVVFHALTQFLALAQKEAIQNREVGDLRKSAIKEC 410 Query: 372 -DANETLELKIIELQMKINNLIVALSVA-PEVTAIAE-------KIRLLDKELRRASVSL 422 D TL+ + + + L + A + KI D ++R+ + Sbjct: 411 ADKIRTLQKQNEQHKASKLRLYEKYAAGSITKEAYIQQKAAADVKIAENDGVIQRSHERM 470 Query: 423 KTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVF 480 K L S+ S A+ + + L L + + I D +I + Sbjct: 471 KELDSETACSDEKLDAVCEQYADCKALTYELTHAFISAVYIY-DLDNIEIVWKFKDFL 527 >UniRef50_B9IZ84 DNA recombinase, putative n=9 Tax=root RepID=B9IZ84_BACCQ Length = 491 Score = 307 bits (787), Expect = 6e-82, Method: Composition-based stats. Identities = 84/516 (16%), Positives = 177/516 (34%), Gaps = 62/516 (12%) Query: 1 MKKA---IAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKH 57 MK+ Y+R S+ S+ Q + WL+ N + + ++D G+S + Sbjct: 1 MKRLGSYAIYVRVSTDRDEQVSSVENQIDICRNWLERNGFIWDEKRVFKDEGISGTLFVN 60 Query: 58 AQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDN 117 A L + I ++ +S+ RL+R+ + +++E +++L H + +I++ + Sbjct: 61 --RPAIQLLLQKAKAKEI---DMVVFKSISRLARD-LKDSLEIREVLLAHNVRIISVEEG 114 Query: 118 TVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRW 177 N+ + L + + + S SS + + K + G + P Sbjct: 115 YDSVKAGKND----MAFELWSLFSAQYSRTLSSSITAALAVKVRRGEHIGKV-----PFG 165 Query: 178 LSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVI 237 + + V + + ++ I+ + I LN VK+ + K W + + Sbjct: 166 Y--NRENQKLVIHDEEAEIVQKIYSWYTDGWGYKKITNELNRLGVKSKTKKN--WQMTSV 221 Query: 238 EKLLANKALIGICVPSYRARGK-------------GISEIAGYYPRVISDDLFYAVQEIR 284 +++L N G + + K ++P +I ++++ V Sbjct: 222 QRILRNPIYKGTFILNQYTSVKVSGKKKQIRNPKEKWFVFPNHHPAIIDEEVWNQVN--- 278 Query: 285 LAPFGISNSSKNPMLINLLRTVMKCEACGNTMI----VHAVSGSLH---GYYVCPMRR-- 335 P + + N R + KC C + M+ Y C R Sbjct: 279 --PKDTNTNKTKITAWNEFRNLAKCAVCSSNMVIVQSYSKKKNGERTEWKYLKCSQYRRA 336 Query: 336 -LHRCDRP-SIKRDLVDYNIINELLFNCSKI------QPVENKKDANETLELKIIELQMK 387 H C I+ II+ L+ + E ++ + L+ + + K Sbjct: 337 GKHGCVNHVPIQYRDFRQFIIDLLVKKGESVTLKLQGNIEEGQEKKIKKLQQLMNVNEQK 396 Query: 388 INNLIVA-LSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNG 446 L+ L +K L+ E+ +A+ L L+ + D I + Sbjct: 397 KKALLDLYLEGLINKEEFEKKRNDLEAEITKANHELFILQQNDIVQT-DIKTIKEAFEQL 455 Query: 447 RELCRTL---AYKTFEKIIINTDNKTCDIYFMNGIV 479 R+ L +KI+I+ D Y + Sbjct: 456 RQREHDLYHVFQTLIQKIVIHQDGMVDITYTFESPL 491 >UniRef50_Q3J212 Putative site-specific recombinase n=1 Tax=Rhodobacter sphaeroides 2.4.1 RepID=Q3J212_RHOS4 Length = 509 Score = 307 bits (787), Expect = 6e-82, Method: Composition-based stats. Identities = 130/443 (29%), Positives = 203/443 (45%), Gaps = 21/443 (4%) Query: 11 SSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFSEFLDAI 70 SS Q+ GDS RQ A++ + +D DLG+SAFK + +GA F+ Sbjct: 2 SSAIQIKGDSFRRQAEASAKYAAEHDLDLIDDYKLADLGVSAFKSDNLTTGALGRFVAEC 61 Query: 71 EHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDSLNEPYS 130 E G I G+ LL+ESLDRLSR+K+ +A IL G+ ++TL D VY+ S ++ S Sbjct: 62 EAGEIEAGSFLLIESLDRLSRDKILDAFSLFARILKTGVKIVTLSDGQVYD-GSSDQVGS 120 Query: 131 LIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDKRTAFVPD 190 + AI + R+N+ES+IKS+R +W +KR+ A E G M++ CP WL L R +++ D Sbjct: 121 IYYAISVMIRSNDESKIKSTRGLANWSQKRKLAAEHGVKMSSQCPAWLKLSVDRKSYLID 180 Query: 191 PDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLANKALIGIC 250 +R K ++ IF+ + N I K LN V F G+ + W + + K L N+A++G Sbjct: 181 KERAKIVQRIFEASASGKGANLITKELNRDKVPTF-GRGALWAEAFVSKTLRNRAVLGEF 239 Query: 251 VPSYRARGKGIS---EIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVM 307 P GK I GY+P VI ++LF VQ ++ + N+ V Sbjct: 240 QPGQYVSGKRQPAGDPIPGYFPPVIEEELFDIVQASLRGRL-LAGGRRGEGQSNIFTHVA 298 Query: 308 KCEACGNTMIVHAVSGS-----LHGYYVCPMRRLH-RCDRPSIKRDLVDYNI-------- 353 C CG+ M + H Y C R CD + + + Sbjct: 299 FCGYCGSKMRHRSKGSRVKGNPPHRYLTCFNRFNGPGCDCKPLPYAAFERSFLTFVRDVD 358 Query: 354 INELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTAI-AEKIRLLD 412 + LL + + D E K+ + +I + ++ + AP++ I E+IR L Sbjct: 359 LRGLLEGAKRKSEAKTIADRITVNEEKVRKADERIRDYLIKIEGAPDLAEIFMERIRELK 418 Query: 413 KELRRASVSLKTLKSKGVNSFSD 435 E S++ SD Sbjct: 419 AEKDDLVRSIEESNDALSKIKSD 441 >UniRef50_Q9XJF6 Site-specific integrase n=3 Tax=root RepID=Q9XJF6_9CAUD Length = 464 Score = 307 bits (787), Expect = 6e-82, Method: Composition-based stats. Identities = 84/496 (16%), Positives = 176/496 (35%), Gaps = 54/496 (10%) Query: 1 MKKAIAYMRFSSPGQM-SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 MK+A Y+R S+ Q G S+ Q + + K Y D G F G + Sbjct: 1 MKRAALYIRVSTMEQAKEGYSIPAQTDKLKAFAKAKDM--AVAKVYTDPG---FSGAKME 55 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 A E + I++ I +LV LDRLSR + + L + +D I++ ++ Sbjct: 56 RPALQEMISDIQNKKI---DVVLVYKLDRLSRSQKNTLYLIEDVFLKNNVDFISMQESFD 112 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 + P+ +++ A E + + R+ + ++ + G + P Sbjct: 113 TST-----PFGRATIGMLSVFAQLERDTITERMHMGRTERAKQGYYHG---SGIVPLGYD 164 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRM-ERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIE 238 + + + I+ I+ L + + + I K + + ++++ Sbjct: 165 YV--HGELIINDYEAQIIQEIYDLYVNQGKGQQYITKRMVA-KYPDKVK-----TLTIVK 216 Query: 239 KLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPM 298 L N IG + G++ +I ++ QEI ++ Sbjct: 217 YALTNPLYIGKISWDGKVY-------DGHHSPIIDKSMYDKAQEIIA-RMAQKGGEQHGN 268 Query: 299 LINLLRTVMKCEACGNTMIVHAVSGSLHG--YYVCPMRRL--------HRCDRPSIKRDL 348 + LL + C CG + + G + YY+C + C +PS+++++ Sbjct: 269 QLGLLLGITYCGKCGAEVFRYVSGGKKYRYNYYMCRSVKKMLPSLVKDWNCKQPSLRQEV 328 Query: 349 VDYNIINELLFNCSKIQPVE------NKKDANETLELKIIELQMKINNLIVALSVAP-EV 401 V+ +I+ L K E K T+ +I + + ++ +V Sbjct: 329 VEKKVIDSLKSLDFKKIERELKQVENKTKSKITTINNQISKKHNEKQKILDLYQYGTFDV 388 Query: 402 TAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRT---LAYKTF 458 T + E+++ +D E+ + ++ L+ S + T E + + Sbjct: 389 TMLNERMKKIDNEINALTANIANLEGTKSESLINKLETLKTFNWETETTENKILIIKEFV 448 Query: 459 EKIIINTDNKTCDIYF 474 E+I + D F Sbjct: 449 ERIELFDDEVIIKYKF 464 >UniRef50_A6LN32 Resolvase, N-terminal domain n=1 Tax=Thermosipho melanesiensis BI429 RepID=A6LN32_THEM4 Length = 485 Score = 307 bits (786), Expect = 9e-82, Method: Composition-based stats. Identities = 92/512 (17%), Positives = 174/512 (33%), Gaps = 60/512 (11%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 MK+A AY R+SS Q S+ Q I ++ + Y+ Y D SA K Sbjct: 1 MKRAAAYARYSSDRQSD-TSIEAQLEKIRKYCEEKG--YVVVKEYIDRAQSAATDK---R 54 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 AF + E+ ++V LDR +R + K + I + + + Sbjct: 55 IAFQQMFKDAEN---HEFDVVVVYKLDRFARNLYDSVVYT-KKLEELNIALESTTEPITQ 110 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS- 179 +I ++ E ++ K + G M P Sbjct: 111 DI------AGKFFRNIMGAINELYIENLKQEIRD----KAIVVAKKGYFMGGVPPFGFKL 160 Query: 180 ------LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWG 233 KR + D + + IF+L + +L IA LN +K G + W Sbjct: 161 VEETDEYGKKRKRYEIDENEAPYVREIFQLASQGVTLRQIADKLNQKGLKTRRG--NKWT 218 Query: 234 PSVIEKLLANKALIGICVP------SYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAP 287 + +++ N+ GI +Y A + + I G P ++ ++ ++ Sbjct: 219 VRALYEMILNEKYAGIYTYQKGTKHNYHANREDVIRIPGVIPAIVDEETYWNA-----RN 273 Query: 288 FGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRD 347 S + LL ++ C CGN M A SG Y +R SI + Sbjct: 274 KLGIGSKRVKRHHYLLNGILYCAVCGNPMNGGAQSGDYPRYMCSYAKRFKEKGHVSIGKK 333 Query: 348 LVDYNIINELL---------------FNCSKIQPVENKKDANETLELKIIELQMKINNLI 392 ++ ++ + N + + K+ + L+ ++ E+ +K+ Sbjct: 334 KIEDYVLTHIKHTFFTNVDFEKLAKQLNKELNKTNKTKEKQIQKLKAELAEINLKLQRAT 393 Query: 393 VALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDL----TSKNGRE 448 A+ E+ + ++I L ++ L+ + ++ S + L K Sbjct: 394 QAILAGVELDTLKDEIEKLKQQKIEKEFKLEKVVNEETPSLITPEGLQLLWNELQKLLET 453 Query: 449 LCRTLAYKTFEKIIINTDNKTCDIYFMNGIVF 480 + K E+I + D DI + N I + Sbjct: 454 EKELVIKKLIERITVYPDG-FIDIKYRNVISY 484 >UniRef50_C3AWE0 U153 integrase n=1 Tax=Bacillus mycoides Rock1-4 RepID=C3AWE0_BACMY Length = 450 Score = 307 bits (786), Expect = 9e-82, Method: Composition-based stats. Identities = 82/487 (16%), Positives = 170/487 (34%), Gaps = 50/487 (10%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 M KA Y+R S+ Q+ S+ QR I + K + + Y D G + G + Sbjct: 1 MIKAAIYIRVSTQEQVENYSIEVQRERIRAFCKAKN--WDVYDEYIDGG---YSGSNLDR 55 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 L + ++V LDRLSR + + L + +D +++ + Sbjct: 56 PDIKRLLKDL-----NKIDVVVVFKLDRLSRSQRDTLELIEEHFLKNNVDFVSITETLDT 110 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 + P+ +++ A E E + R+++ K+ + L P + Sbjct: 111 ST-----PFGKAMIGILSVFAQLERETIAERMRMGHIKRAEKGLRGNG--GDYDPAGYAR 163 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 ++ V D K I+ F+L + S+ + + L + S W + Sbjct: 164 NE--GHLVTKDDEAKHIKRAFELYEQYNSITRLQEILKEEGY-------SVWRFRRYRDI 214 Query: 241 LANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLI 300 L+N G + + G + +IS + F VQ I + + Sbjct: 215 LSNPLYAGYVTFAGKTYK-------GQHEPIISLEQFKRVQAIL---SRHKGHNAHKAKQ 264 Query: 301 NLLRTVMKCEACGNTMIVHAVSG-----SLHGYYVCPMRR-----LHRCDRPSIKRDLVD 350 +LL +M C CG + ++ + YY+C +R RC + R ++ Sbjct: 265 SLLSGLMTCSCCGEPFVAYSTGKSKDVSRRYYYYICRAKRFPSEYEQRCMNKTWSRKKLE 324 Query: 351 YNIINELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTA--IAEKI 408 +I ++ + K+ E I ++ K+ L+ + ++ + +K+ Sbjct: 325 DIVIGQMKDLTVAKYHNQKKEKKI-NYEKLIKDIDKKMERLLDLFTTNTNISRQLLEKKM 383 Query: 409 RLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTL-AYKTFEKIIINTDN 467 + E + + + + + S + + R + E+I I+ +N Sbjct: 384 EEHNLEKEKLILKQQKSEQEISISNDMLTKTLKSFDSLEFKDRQIVINHFIEEIYIDHEN 443 Query: 468 KTCDIYF 474 F Sbjct: 444 VEVIWRF 450 >UniRef50_C9LP68 DNA integration/recombination protein n=1 Tax=Dialister invisus DSM 15470 RepID=C9LP68_9FIRM Length = 503 Score = 306 bits (785), Expect = 1e-81, Method: Composition-based stats. Identities = 91/511 (17%), Positives = 168/511 (32%), Gaps = 63/511 (12%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 M +A Y RFSS Q +S+ Q R E+ K ++ Y Y D S Sbjct: 1 MLRAALYARFSSENQRE-ESILAQFRDSTEYCKKHN--YAIVAKYADEAKSGTTT--IGR 55 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 + L + G ++ +DR +R ++ + + G+ + Sbjct: 56 EQYKLMLKDAQKGK---FDIVVFHKIDRNARNEL-DYYITKHKLEEAGVKYAYSRQDIDS 111 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 P + ++ A S S+ +K ++ G P S+ Sbjct: 112 T-----SPEGQMMESMLVGMAAYYSRNLSNEIKKGLRENAIQ----GKCTGGRPPYGFSV 162 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 D + + + D + +IF L I K L + +N +GKE + + I ++ Sbjct: 163 DADKK-LIINEDEAPAVRMIFDLYAAGVHYGVIRKRLFNAGYRNRAGKE--FTIASIYEI 219 Query: 241 LANKALIGICVPSYRARGKGISE----------IAGYYPRVISDDLFYAVQEIRLAPFGI 290 L N+ +G KG P +S ++F VQ Sbjct: 220 LRNRKYVGDLYLGKTLFRKGKRNNHQTSDNVQYFENVIPATVSREIFEEVQVKLDQNKRR 279 Query: 291 SNSSKNPMLINLLRTVMKCEACGNTMIVHAVS---GSLHGYYVCPMRR---LHRCDRPSI 344 S + N I L ++ C CG+ M+ H+ G + YY CP R +C + I Sbjct: 280 SGAG-NAKAIYALSGLIHCGQCGSAMVAHSTKNSRGIKNYYYRCPKGRLLGEEKCPQKFI 338 Query: 345 KRDLVDYNIINELLFNCSKIQPVENKK----------------DANETLELKIIELQMKI 388 RD ++ + + + + K + + L+ + + ++ Sbjct: 339 NRDDIESTVYQLIRKLFTAPDAHDQIKRIIAKNNMTVKVPDYTELIKRLKKQESDASKRL 398 Query: 389 NNLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAID-------- 440 + L + K+ L +E+ R +K + + S + ID Sbjct: 399 DKLYDLYMTDRGDEFTSAKMAQLKEEILRLRAQIKEAEDRQAIVQSTTFDIDKIIDTFQK 458 Query: 441 -LTSKNGRELCRTLAYKTFEKIIINTDNKTC 470 L K E +TL + I + D Sbjct: 459 QLKQKQSPEFIKTLFELAVKNITVYPDKIKV 489 >UniRef50_A9NFR7 Serine recombinase n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NFR7_ACHLI Length = 572 Score = 306 bits (785), Expect = 1e-81, Method: Composition-based stats. Identities = 96/513 (18%), Positives = 188/513 (36%), Gaps = 62/513 (12%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 K+ AY+R S+ S QR + + N D+ D Y D G+S K+ Sbjct: 27 KRVCAYVRVSTDNLEQKTSYEAQRDEYTQRITKNPDWIFD-GIYADEGISGTSTKN--RK 83 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F+ ++ G I +L +S+ R +R V +A+ ++ + +++I +N Sbjct: 84 QFNLMIEKARAGQI---DIILTKSISRFARNTV-DALNYIRELRQINVEIIFEKENI--- 136 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 S +P +++ A EE+ S VK + +++ ++ + I+ + D Sbjct: 137 --SSLDPKVEFLLTIMSSMAQEEARNVSENVKWNVQRRFREGV---PIINHKRFLGYTKD 191 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 K V P+ + ++LIF L + IAK L + K +GK + W S I +L Sbjct: 192 KKGGNLVVVPEEAQIVKLIFNLYISGVGPAKIAKQLIEMGAKTGAGK-TEWRLSTITTIL 250 Query: 242 ANKALIGICVPSY----------RARGKGISE---IAGYYPRVISDDLFYAVQEIRLAPF 288 N+ +G + R + K + + +I D F Q IR Sbjct: 251 KNEKYMGDMLQQKTISIDYLSHTRVKNKNHAPTYYTENSHEAIIDRDTFELAQRIRKDRA 310 Query: 289 GIS----NSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYV---CPMRRLHR--C 339 + + L ++ C CG T+ + V C + C Sbjct: 311 KVRIGEDKNLSKYSRTYPLTAMIICSECGRTLKRRYWNYGKPSQRVMQQCGSYIEGKANC 370 Query: 340 DRPSIKRDLVDYN--------------IINELLFNCSKIQPVENKKDANETLELKIIELQ 385 + + +DL++ I++ + V++ + E L L+ E + Sbjct: 371 NAKASHQDLIEATTIHMLNKVFLKDLDIMSTIQRIIKSTIKVDDVQGIIEKLTLERDENE 430 Query: 386 MKINNLIVALSVAPEVTA--IAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTS 443 + ++NLI P++ K R L+ + + L+ + V ++ +D + Sbjct: 431 IALSNLIDTKVKTPDIPESIFNTKYREYSDRLKVLTAEINKLELEHVKNYDTRKRMDKIN 490 Query: 444 K-------NGRELCRTLAYKTFEK-IIINTDNK 468 + EL + K I +N + Sbjct: 491 EILGKKNLVIDELDSEILSTFIYKMISVNPNEI 523 >UniRef50_C6JGM7 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGM7_9FIRM Length = 535 Score = 306 bits (785), Expect = 1e-81, Method: Composition-based stats. Identities = 82/538 (15%), Positives = 193/538 (35%), Gaps = 88/538 (16%) Query: 7 YMRFSSPGQM---SGDSLNRQRRLIAEWLKVNSDYY-LDTITYEDLGLSAFKGKHAQSGA 62 Y+R S + +S+ QR +I +++ +++ + + ++D G + G + Sbjct: 10 YLRLSLEDEDMLDESNSITNQRIVIGQYIASKNEFKNTEVLEFKDDG---YSGTNFDRPG 66 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F ++ + G + +T++V+ L R R + ++ + I + DN Sbjct: 67 FQSMMELVRDGKV---STIIVKDLSRFGRNHIEVDTYLEQIFPFMNVRFIAINDNVDSMK 123 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWL-SLD 181 P I S S +VK + ++++ G M A P D Sbjct: 124 YESGMPG--IDVGFRNIINEHHSIDTSVKVKRTLIQRQKA----GKYMGARAPYGYLKPD 177 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNF--------------SG 227 + T+ V +P+ +++IF+ ++ ++ +A+YLN+ + + + Sbjct: 178 EDVTSLVINPETAPVVKMIFQKYLDGMNITQLARYLNEQKIMSPGQYKREVLKTGVKKTT 237 Query: 228 KESAWGPSVIEKLLANKALIGICVPSY------------RARGKGISEIAGYYPRVISDD 275 ++ W P + +L + G + + + + + G + ++S + Sbjct: 238 EKYIWYPVTVRLILMTETYTGTTIGGKWKVASVGSNKHLKTKEEDWIVVEGTHEAIVSKE 297 Query: 276 LFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMR- 334 +F AVQE + + N L+ ++KC CG + ++ CP + Sbjct: 298 VFDAVQEKLELNSRKRSKTHNNN--YPLKGLVKCGGCGQNLQHVTRCN---PHFKCPRKF 352 Query: 335 --RLHRCDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLELKIIELQMKINNLI 392 C ++ D + I + + DA LEL+ EL+ K+N Sbjct: 353 NVANQDCVTDNLYDDEFNEMIFRAIK------LFAKISDDAEPVLELQKAELKSKVNGAA 406 Query: 393 VALSVAPEV----------------------TAIAEKIRLLDKELRRASVSLKTLKSKGV 430 + A + K LDK++ + ++++ ++++ Sbjct: 407 KKIRDAKDSISRYKHQKTELYMRYAMEEISEEEFTRKNDKLDKQIEKETLAIAQMETEQS 466 Query: 431 NSFSDFYAI--------DLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVF 480 + + + + ++L R +A I + ++K +I + Sbjct: 467 EAAERLFELPPDGRQCLTDLIEGNKQLTREIAVTFIRGIKVY-NDKRIEIEWNFADEL 523 >UniRef50_B2IQ45 Site-specific recombinase, resolvase family n=19 Tax=Firmicutes RepID=B2IQ45_STRPS Length = 597 Score = 306 bits (785), Expect = 1e-81, Method: Composition-based stats. Identities = 94/520 (18%), Positives = 183/520 (35%), Gaps = 65/520 (12%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 +K+ AY R SS + +S + Q R E++ SD+ L Y D G+S + + Sbjct: 26 LKRVAAYCRVSSDSEDQKNSYDSQVRHYKEYISQRSDWEL-ADIYADEGISGTQVG--KR 82 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 F ++ +G I ++ +++ R +R + + ++ ++++ + I V +N Sbjct: 83 QDFQRLINDCANGEI---DYIVTKAIARFARNTL-DTLKYVRMLKDMQIGVYFEEEN--- 135 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 ID+L L+ IL + A +E E S+ VK K K Q G ++ Sbjct: 136 -IDTLTMDGELLLTIL-SSVAQQEVENTSAHVKKGLKMKMQR----GELVGFQGCLGYDY 189 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 D + + K + IF+ +E IA+ L++ K+ G E W + + + Sbjct: 190 DVETKQISINKKEAKIVRYIFERYLEGIGGKVIARELDELGYKSPRGLE-HWNDTTVLGI 248 Query: 241 LANKALIGICVPSYRARGKGISE-------------IAGYYPRVISDDLFYAVQEIRLAP 287 + N+ G + IS+ I + +IS + F QEIRL Sbjct: 249 IKNEKYKGDILMGKTFTVDPISKRRLSNFGEEDKYYIKDNHEPIISKEDFEKAQEIRLRR 308 Query: 288 FGISN-------SSKNPMLINLLRTVMKCEACGNTMIVHA---VSGSLHGYYVCPMRRLH 337 G + + ++++C CG+ + + S + C Sbjct: 309 AGNKKTAANVNGKRERYSKMYAFSSMLECGFCGSILSRRSWHCRSDYRKVVWHCVTSIKK 368 Query: 338 R---CD-RPSIKRDLVDYNIINE--------------LLFNCSKIQPVENKKDANETLEL 379 C ++ ++ + LL + + + Sbjct: 369 GKKFCKHSKGLEEIAIEGAFLEAYRQVYHSNENLMTDLLETIESELNDNSLNKELKRITN 428 Query: 380 KIIELQMKINNLIVA-LSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFS---- 434 K+ L K NL+ L + EK + E + +++ + Sbjct: 429 KLRILLKKEENLVNLRLEGKVSDSIYNEKYNEISSEKEFLAEEKVNIETTLKSEIDVKKR 488 Query: 435 --DFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDI 472 +F + + K E R + EKII+ N +I Sbjct: 489 LTEFKHLLSSQKMLTEFDRAVFESIVEKIIVGGVNSNGEI 528 >UniRef50_B5XQB9 Site-specific recombinase, resolvase family n=6 Tax=Enterobacteriaceae RepID=B5XQB9_KLEP3 Length = 523 Score = 306 bits (784), Expect = 1e-81, Method: Composition-based stats. Identities = 136/487 (27%), Positives = 223/487 (45%), Gaps = 21/487 (4%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 M++ I Y+RFSS Q GDS+ RQ+ L WLK N D + + D G SA+ G H + Sbjct: 1 MRQVITYLRFSSKPQERGDSIRRQKGLFERWLKDNPDAKVVD-EFSDEGASAYHGHHLK- 58 Query: 61 GAFSEFLDAIEHGYILPG-TTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 G F L I+ G L G T LLVES RL+R+K + LI G+DVI L + Sbjct: 59 GDFGRMLQNIQDGKYLSGQTVLLVESETRLNRQKARNTENLVDLITGKGVDVICLESGKI 118 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 Y ++++ + I+ + A A+++S+ KS +V +W+ + Q ALE +T + P W+ Sbjct: 119 YTSTNIDDLDTSIQLKIAAHIAHQQSKEKSIKVSAAWEHRAQLALEGKQQLTKNVPGWID 178 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVK--NFSGKESAWGPSVI 237 D ++ + T+ IF L + SL+ IA+YL + +K + K + + + Sbjct: 179 PDTRKLN-----EHSSTVVTIFDLLLSGESLHNIARYLQANNIKSFSRREKANGFSVHSV 233 Query: 238 EKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPF-GISNSSKN 296 +L +++ +G S R I YY I F QEI G + +S N Sbjct: 234 RTILRSESTVGTLAASKR---NDRPAIPNYYEPAIDVATFNKAQEILSKNRVGRAPASDN 290 Query: 297 PMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINE 356 P+ INL + +++C CG ++ V + G Y C RC+ P+IKR D +++ Sbjct: 291 PITINLFKGIIRC-QCGASVHPTGVKATYQGVYRCNNVPDGRCNVPTIKRKPFDKWMLDN 349 Query: 357 LLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTAIAEKIRLLDKELR 416 ++ + N +E +I + K+ L +VT + E+++ L+ + Sbjct: 350 IIGFLER-SDGNNTDKRKAEIEYQISLVTSKLKKAATLLLELDDVTELKEQVKELNIQRI 408 Query: 417 RASVSLKTLKSKGVNS---FSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIY 473 L L + S IDLT+K GR + + K + I + + I Sbjct: 409 NMQSELDDLNQRETLSDKPLHHLSEIDLTTKAGRVEAQLILSKFVQSIELQRE--MIIIT 466 Query: 474 FMNGIVF 480 NG V Sbjct: 467 LRNGAVI 473 >UniRef50_B9M0D0 Recombinase n=1 Tax=Geobacter sp. FRC-32 RepID=B9M0D0_GEOSF Length = 619 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 146/540 (27%), Positives = 239/540 (44%), Gaps = 58/540 (10%) Query: 4 AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAF 63 I+Y+RFS+ Q G S+ RQ L ++ + + D ++Y DLG SA+ G H + G F Sbjct: 6 CISYIRFSNVSQSDGSSVERQLELSQKYAEEHGLILDDKLSYRDLGRSAYSGDHVRRGHF 65 Query: 64 SEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNID 123 EFL+ + G I G+ LLVESLDRLSRE V +A + ++I+ I ++TLCD Y + Sbjct: 66 GEFLELVRQGSIPTGSVLLVESLDRLSRENVLDAFAQFQVIVGEDIKIVTLCDGMEYTRE 125 Query: 124 SLNEPYS-LIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 +LN + LI ++ I RA EES KS R++ + + KRQ+ TA+CP WL L Sbjct: 126 NLNSDFGKLIISLTIMARAYEESCRKSERIRAANRFKRQNL--DKVKYTANCPTWLRLIK 183 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 F DR + IF + E + IA+ LN ++ W S I K+L+ Sbjct: 184 SENRFEVIHDRAAIVNRIFSMSYEGMGIKTIARILNHEKIQPPR-SSLGWCQSSIRKILS 242 Query: 243 NKALIGICVPSY-----RARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNP 297 ++++IG P + S + GY+PR++ D++++AVQ G S + Sbjct: 243 SRSVIGEYQPHIYNRATKKHVPEGSPVPGYFPRIVEDEVYFAVQARLC--NGTHISGRTA 300 Query: 298 MLINLLRTVMKCEACGNTM--IVHAVSGSLHGYYVC-PMRRLHRCDRPSIKRDLVDYNII 354 + NL + KC CG M + H + VC RR +C S K + ++ + Sbjct: 301 KIQNLFGGITKCGYCGARMDIVSHKNRNEISRLLVCDQARRGVKCSYISFKCNELESAFL 360 Query: 355 NELLF----NCSKIQPVENKKDANETLEL------KIIELQMKINNLIVALSVAPE---- 400 + + KI+ +++ E + +++++ +I L L + Sbjct: 361 SYCKEIDFISVLKIEGTRDQQRLTELTQQVAAKNGELLDINRQIELLGNELPQITDTLEL 420 Query: 401 -------------VTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLT-SKNG 446 AI + I + +KE+ + S+ +K N D S Sbjct: 421 GFFRTRLSKLLQAKAAIEDAIAVREKEINELNASMHDADNKAGNIAELMDYFDAAPSDED 480 Query: 447 RELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKHYPLMKVISAQQAISALKYMVDGEI 506 R L RT +I+ K +Y P +V S +Q I + ++ EI Sbjct: 481 RVLVRTRLRNEIRQIV-----KQVLVY----------PRGRVASDEQII-KVALQLNDEI 524 >UniRef50_Q1CPJ9 Site-specific recombinase n=7 Tax=Streptococcus pyogenes RepID=Q1CPJ9_STRPF Length = 471 Score = 305 bits (783), Expect = 2e-81, Method: Composition-based stats. Identities = 80/500 (16%), Positives = 172/500 (34%), Gaps = 55/500 (11%) Query: 1 MKKAIAYMRFSSPGQMS-GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 M+K Y R S+ Q G S+ Q + ++ + + Y D G F G + Sbjct: 1 MRKVAIYSRVSTINQAEEGYSIQGQIEALTKYCEA--MEWKIYKNYSDAG---FSGGKLE 55 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 A +E ++ G T+LV LDRLSR + + I ++L +N Sbjct: 56 RPAITELIED---GKNNKFDTILVYKLDRLSRNVKDTLYLVKDVFTANNIHFVSLKEN-- 110 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 ID+ + +L L++ A E E R++ + + + + P Sbjct: 111 --IDTSSAMGNLFLT-LLSAIAEFEREQIKERMQFGVMNRAKSGKTT---AWKTPPYGYR 164 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEK 239 + + + +F + + S+ +I Y D+ V + W +++ Sbjct: 165 YNKDEKTLSVNELEAANVRQMFDMIISGCSIMSITNYARDNFV------GNTWTHVKVKR 218 Query: 240 LLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPML 299 +L N+ G+ + +G + +I + + Q +++ Sbjct: 219 ILENETYKGLVKYREQT-------FSGDHQAIIDEKTYNKAQIALAHRTDTKTNTRPFQG 271 Query: 300 INLLRTVMKCEACGNTMI----VHAVSGSLHGYYVCPMRRL-------------HRCDRP 342 +L + KC CG + G+ YVC + C+ Sbjct: 272 KYMLSHIAKCGYCGAPLKVCTGRAKNDGTRRQTYVCVNKTESLARRSVNNYNNQKICNTG 331 Query: 343 SIKRDLVDYNIINELLFNCSKIQPVENKKD-----ANETLELKIIELQMKINNLIVA-LS 396 ++ ++ +I+ L + ++ K L+ +I + KIN L ++ Sbjct: 332 RYEKKHIEKYVIDVLYKLQHDKEYLKKIKKDDNIIDITPLKKEIEIIDKKINRLNDLYIN 391 Query: 397 VAPEVTAIAEKIRLLDKELRRASVSLKT--LKSKGVNSFSDFYAIDLTSKNGRELCRTLA 454 ++ + + I L+ + ++K L K +S K+ ++ + Sbjct: 392 DLIDLPKLKKDIEELNHLKDDYNKAIKLNYLDKKNEDSLGMLMDNIDIRKSSYDVQSRIV 451 Query: 455 YKTFEKIIINTDNKTCDIYF 474 + +++ + DN F Sbjct: 452 KQLIDRVEVTMDNIDIIFKF 471 >UniRef50_B9XI16 Resolvase domain protein n=1 Tax=bacterium Ellin514 RepID=B9XI16_9BACT Length = 540 Score = 305 bits (783), Expect = 2e-81, Method: Composition-based stats. Identities = 120/507 (23%), Positives = 227/507 (44%), Gaps = 41/507 (8%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 +KAI+Y+RFSS Q G SL RQ + ++ + +++T +DLGLSAF+GK+A SG Sbjct: 13 RKAISYIRFSSLKQEEGFSLARQLEGTKGFCSRHNLFLDESLTVKDLGLSAFRGKNADSG 72 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 FL A+ I GT L+VE+LDRL+R + EA L IL GIDV + ++ VY+ Sbjct: 73 NLGVFLAAVRENKIPKGTVLVVEALDRLTRNNIVEASHLLTDILRQGIDVGLVTEDKVYS 132 Query: 122 IDSLN-EPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 D +N P+ I A R +ES +KS R+K +W +K++ +E+ + P WL Sbjct: 133 YDYINKNPFEFIVATTYLIRGGDESRMKSERIKDAWSRKKRCIVETKEAVKIPAPCWLKR 192 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRM-ERRSLNAIAKYLNDHAVKNFSGKES---AWGPSV 236 + ++ + + K ++ IF + E + +++ +N V + + W Sbjct: 193 EGQK--WSVISKKAKVVKEIFAAYLKESLGIWRLSQTMNSQKVPVITNGATPASKWHRIT 250 Query: 237 IEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKN 296 + ++L +KA+IG K + Y+P +I FYAVQ + Sbjct: 251 LHRILTDKAVIGTYT-------KLDEPVENYFPAIIPQKDFYAVQAKLQER-RHYRGRHS 302 Query: 297 PMLINLLRTVMKCEACGNTMIVHAVSGSL-------HGYYVCPMRRLHRC-DRPSIKRDL 348 ++LL+ + KC CG+TM + + + Y C L C S+ + Sbjct: 303 LKDVSLLKGICKCGKCGSTMTRITRTRKIKGGGSKLYRYLYCHNSILGLCKPATSVDLNE 362 Query: 349 VDYNIINELLFNCSKI------QPVENKKDANETLELKIIELQMKINNLIVALS--VAPE 400 ++ ++ + + + + + ++ + T++ +I + + + LI + A Sbjct: 363 LERIFLHYMFTSETALTFLSECKADDSIQTELRTIDGQIEDKAARRDRLIAVIESDAAAT 422 Query: 401 VTAIAEKIRLLDKELRRASVSLKTL----------KSKGVNSFSDFYAIDLTSKNGRELC 450 +++ E+I L++E++ V +L ++ + F + R Sbjct: 423 PSSVLERIASLEQEIKMLRVKKDSLTATLNRNPQGEAALNDLFVTAEKVLKNKPADRLRL 482 Query: 451 RTLAYKTFEKIIINTDNKTCDIYFMNG 477 R L + + + +++ + G Sbjct: 483 RELIRQFVRSMTVYPEHRKAIFTTIAG 509 >UniRef50_D1AQX9 Recombinase n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AQX9_SEBTE Length = 496 Score = 305 bits (783), Expect = 2e-81, Method: Composition-based stats. Identities = 97/508 (19%), Positives = 178/508 (35%), Gaps = 59/508 (11%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 MKKA+ Y RFSS Q S++ Q R I ++ N+ L T TY D +S Sbjct: 1 MKKAVIYARFSSDNQR-SVSIDAQIRAIRDYCSKNN--ILVTDTYIDEAISGTSANS--R 55 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 F + ++ ++V LDR +R +A K + ++ + +I++ + Sbjct: 56 VHFLKMIEDSSK---NNFDYVVVHKLDRFARNSYDQAYY-EKKLNDNRVKIISVLEQF-- 109 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 + P +I +I S S K + + + P L + Sbjct: 110 ----NDSPEHVILKGVITSMNEYYSLNLSRETKKGLYEN----FYNCQHASGMPPLGLDV 161 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 D + +V + + K + LIF+L +E I+ +LN N + +G I + Sbjct: 162 DKETRKYVINEEEAKIVRLIFRLSLEGNGYAFISNFLNKKGYLNKRKRP--FGKGGIRDM 219 Query: 241 LANKALIGICVPSYRARG----KGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKN 296 L N+ IG + + + G P +I + FYAVQ+I I++ N Sbjct: 220 LLNEKYIGNYILGKKNKKGQLTGREKIQEGVIPAIIDKETFYAVQDIFKNR--IASKKSN 277 Query: 297 PMLINLLRTVMKCEACGNTMIVHAV---SGSLHGYYVCPMRRLHR--CDRPSIKRDLVDY 351 + LL KC CG + + Y C R+ + C P I+++++++ Sbjct: 278 AKVDYLLTGFCKCGECGGSYSGAGKIKGRSKQYDSYGCTSRKSKKTDCINPKIRKEVLEH 337 Query: 352 NIINELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAP------------ 399 + + +I + + L KI + I+ L A Sbjct: 338 IVFKAIK---DEIFSPDRLNIFIQELTKKIDDQNKNIDVLTKKNDQAIQNIKNKKEKLLS 394 Query: 400 -------EVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRE---- 448 K L+ +L + L + A G E Sbjct: 395 LFLDSHLNEDEFKPKNDELELQLIEKIRERENLNRGNGIDVNKIKAYVRKLVEGLENKNV 454 Query: 449 -LCRTLAYKTFEKIIINTDNKTCDIYFM 475 + + + E+I++ + T + F Sbjct: 455 SIKKQILQTFVEEILVFKGHITIRLKFF 482 >UniRef50_D2P2Z1 Site-specific DNA recombinase n=2 Tax=Listeria monocytogenes RepID=D2P2Z1_LISMO Length = 533 Score = 305 bits (783), Expect = 2e-81, Method: Composition-based stats. Identities = 98/523 (18%), Positives = 184/523 (35%), Gaps = 60/523 (11%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 K+ AY R S+ + +S + Q + E + D+ Y D S K + Sbjct: 23 KRVCAYCRVSTDSREQQNSFSAQVKYYTELIGKKDDWEY-AGIYADEARSGT--KLQKRD 79 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F + E G + ++ +S+ R +R V ++I+ ++ + I V ++ Sbjct: 80 EFLRMMKDCEAGKV---DMIITKSVTRFARNTV-DSIQAIRKLKALSIAVYFEKEH---- 131 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 I++L+E + IL + A ESE S+ K + KK+ QD G+ + + D Sbjct: 132 INTLSEKSEQMLTIL-SSLAQGESEGISTNTKWAVKKRFQD----GSFILGCPAYGYTKD 186 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 + + + + IFK + + IAK L++ + E W SV++++L Sbjct: 187 EA-GELIIKDEEAVVVHRIFKEYLNGKGSYVIAKGLSEDGIPTIRNAE-KWQDSVVKEIL 244 Query: 242 ANKALIGIC----------VPSYRARGKGISE---IAGYYPRVISDDLFYAVQEIRLAPF 288 N G VP R KG I+ + +I+ + F AV+EI Sbjct: 245 QNPIYTGDLLLQKTFTTEVVPFKRKTNKGQLPQYFISENHEPIITREQFEAVKEIYEYRR 304 Query: 289 GISN--SSKNPMLINLLRTVMKCEACGNTMIVHA---VSGSLHGYYVCPMR--RLHRCDR 341 S + + C CG+T + C +C Sbjct: 305 EQMGIDDSGKYQNRYAFSSNIICGECGSTFRRQKIYIGKPYEKIQWCCSQHIEDKSKCSL 364 Query: 342 PSIKRDLVDYN--------------IINELLFNCSKIQPVENKKDANETLELKIIELQMK 387 I+ D+++ I+ +L + ++ E ++ +I+EL + Sbjct: 365 KGIREDVIERAFIVMWNKLTSNYTEILIPMLESLKGLRIDEQQEQEISECNNRIMELTEQ 424 Query: 388 INNLIVALSVA-PEVTAIAEKIRLLDKELRRASVSLKTL------KSKGVNSFSDFYAID 440 + L ++ + E+ L EL A L + + I Sbjct: 425 SHILSSVVAKGYIDSAVFIERQNTLTLELTAAKKKRSQLLDSNGFDREIARTELLIALIQ 484 Query: 441 LTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKHY 483 E L + +KII++ +N T N + Y Sbjct: 485 SNPNILEEYDENLFLQAVDKIILH-ENHTITFRLKNSLELTEY 526 >UniRef50_A0L9E5 Recombinase n=19 Tax=Bacteria RepID=A0L9E5_MAGSM Length = 447 Score = 305 bits (783), Expect = 2e-81, Method: Composition-based stats. Identities = 71/415 (17%), Positives = 154/415 (37%), Gaps = 47/415 (11%) Query: 3 KAIAYMRFSSPGQMSGD--SLNRQRRLIAEWL--KVNSDYYLDTITYEDLGLSAFKGKHA 58 + Y R S+ + D SL+ QR A ++ + + L Y+D A+ G + Sbjct: 8 RCAIYTRKSTDEGLEQDFNSLDAQRESCANFIASQKQEGWVLVPDHYDDP---AYSGGNL 64 Query: 59 QSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNT 118 A L IE G + +++ +DRLSR + + + +++ H + ++ Sbjct: 65 DRPALQRLLQDIEAGKV---DSIVCYKIDRLSRS-LMDFAKLVEIFDRHQVTFTSVTQ-- 118 Query: 119 VYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWL 178 + ++ N L ++ A E E+ + R++ + R+ G M P Sbjct: 119 --SFNTANSMGRLTLN-MLLSFAQYEREVTAERIRDKYAASRKR----GIWMGGHPPLGY 171 Query: 179 SLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNF--------SGKES 230 ++D++ V + + + + IFK ++ S + K L + + + + Sbjct: 172 DVEDRK--LVINAEEAQQVRQIFKRFIQMGSATLLIKELGEKGITSKIRQLADGRTKGGK 229 Query: 231 AWGPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGI 290 + + K+L N+ +G G + +I+ D + VQ I Sbjct: 230 SIDKGTLYKILNNRVYLGEVAF-------RGEVYPGEHAPIIAQDQWDKVQSILKKNRRS 282 Query: 291 SNSSKNPMLINLLRTVMKCEACGNTM--IVHAVSGSLHGYYVCPMRRLH---RCDRPSIK 345 +++ L+ +++C C M +G + YY+C + C S+ Sbjct: 283 RSNNTRNQSPAPLKGIIRCGHCNRAMRPTHTRKNGIQYRYYLCMTASKNSHADCPLASVS 342 Query: 346 RDLVDYNIINELLFNCSKIQPV-----ENKKDANETLELKIIELQMKINNLIVAL 395 VD + + + + V + ++ E + +I KI+ + L Sbjct: 343 APQVDEAVFKRVRQIITTPEMVSHVWRQTSEELPEVRQQEISTALKKIDPIWDEL 397 >UniRef50_B8FU54 Resolvase domain protein n=2 Tax=Clostridiales RepID=B8FU54_DESHD Length = 539 Score = 305 bits (782), Expect = 2e-81, Method: Composition-based stats. Identities = 81/528 (15%), Positives = 171/528 (32%), Gaps = 65/528 (12%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 + Y R S+ + DS Q E + ++ + + + D G +A K + Sbjct: 29 RVAPYCRVSTNSEEQLDSYQAQIEYYTERIAAQPEWTMVDM-FADEGKTATSTK--KRKD 85 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F + A E G + ++ +S+ R R + + ++ ++ + G+ V +N Sbjct: 86 FLRMIKACEKGKV---DLVITKSVSRFCRNTL-DGLDYVRKLKRMGVGVFFEKENVNTLY 141 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 + + + +A ESE S ++ +K +D + + Sbjct: 142 -----MDNEMILTFMMSQAQAESESMSGNIRWGHRKNFKDGK---VYYHYAGFLGYRKGE 193 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 DP+ + + +F + S++ I L +K GKE W VI +L Sbjct: 194 DDLP-EIDPEEAEIVRRVFSRYLVGHSVSKIIADLEADGIKTVRGKE-KWNDGVIRGMLK 251 Query: 243 NKALIGICVPSY--------RARGKGISE-----IAGYYPRVISDDLFYAVQEIRLAPFG 289 N+ IG + R K E + +P +I F VQE Sbjct: 252 NEKYIGDALLQKTFIADLFTRQSKKNNGELPQYYVENCHPAIIDKLTFQRVQEEMARRSS 311 Query: 290 ISNSSKNPML-------INLLRTVMKCEACGNTMIVHAVSG--SLHGYYVCPMRRLHR-- 338 + S N +L ++ C CG+ + + C R + Sbjct: 312 LRKVSANAKTELAKYSGKYVLTELLSCGNCGSPYRRVTWTRPEGKKIVWRCINRLENGKK 371 Query: 339 -C-DRPSIKRDLVDYNIINE-------------LLFNCSKIQPVENKKDANETLELKIIE 383 C D P+++ + +++ L + + + + ++ ++ E Sbjct: 372 FCKDAPTLEESRIHAAVVSAMNEMFSLKTMKSLLQDSILSALSGNSGETSIAAIDSRLSE 431 Query: 384 LQMKINNLIV-ALSVAPEVTAIAEKIRL-------LDKELRRASVSLKTLKSKGVNSFSD 435 L+ + L+ A SV + T E + L + + + + + Sbjct: 432 LRARQYELLQFAASVGADSTQYDEDLNKVSMEFSALVSKRSELEKNQQGIAQADKRAEQI 491 Query: 436 FYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKHY 483 +D + I + ++K I F +G + Sbjct: 492 AAELDKVDTGITCFDELTVRQLIGAIKVLDEDKLL-IRFKDGTEIEQI 538 >UniRef50_B1R3Z5 Putative site-specific recombinase, resolvase family n=4 Tax=Clostridium RepID=B1R3Z5_CLOPE Length = 564 Score = 305 bits (782), Expect = 2e-81, Method: Composition-based stats. Identities = 85/550 (15%), Positives = 183/550 (33%), Gaps = 80/550 (14%) Query: 3 KAIAYMRFSSPGQ-MSGDSLNRQRRLIAEWLKVN-SDYYLDTITYEDLGLSAFKGKHAQS 60 K Y+R S S+ Q++++ E+L+ D Y+ Y D GL G + Sbjct: 20 KVAVYIRLSREDGNDESLSVINQKKILKEYLEEMFEDEYVLVDFYVDDGL---TGTDDER 76 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 +F + ++ G + ++ ++L R R + + + + I L Sbjct: 77 ESFQRMIKDVKQGKV---NCIICKTLARAFRNYSDQGYFLEEFLPLYRTRFICLGSPKFD 133 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 + + + + + S+ ++ ++ KR+ +G + A P Sbjct: 134 TYLNPEAITDGLDVPITGLMNDRYAARASADIRRTFNTKRR----NGEFIGAFAPYGYKK 189 Query: 181 DDK-RTAFVPDPDRVKTIELIFKLRM-ERRSLNAIAKYLNDHAVKNFSGK---------- 228 + + D + + I IF+ R+ E + I + LN+ + Sbjct: 190 SPDNKNKLIIDEEAAQVIRDIFRWRVEEGINKLGIVRRLNELGTLTPTKYKHSKGLMLKN 249 Query: 229 ------ESAWGPSVIEKLLANKALIGICVPSYRARG------------KGISEIAGYYPR 270 + W + I +L N+ IG V + + + Sbjct: 250 PNLDKQDGMWSMNTICTILKNRMYIGDMVQGRQRVISYKVHKTICTPENEWFIVENTHEA 309 Query: 271 VISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSG------- 323 +I D + QE+ +S +N + L ++C C +M Sbjct: 310 IIDKDTYLKAQELDQRGIRMSPKGRN---VYLFSGFLRCADCKRSMTKKTNKNKLNDGTV 366 Query: 324 SLHGYYVCPM---RRLHRCDRPSIKRDLVDYNIINELLFN----------CSKIQPVENK 370 + YY+C + +C R SIK ++++ ++ + S+I Sbjct: 367 KEYNYYICSTYALKNKSKCSRHSIKLEILEEAVLKAIQIQVAMVENMSEVISEINKQATI 426 Query: 371 KDANETLELKIIELQMKINNLI--------VALSVAPEVTAIAEKIRLLDKELRRASVSL 422 + + L+ ++ E Q ++ +I S A + + + Sbjct: 427 VNQSSRLKKQLNEKQKELEKIICVTDNLYMDWKSEEISRNEYARMKSKFEIKAEEIRRII 486 Query: 423 KTLKSKGVNSFSDFYAID------LTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMN 476 ++++ +S +F D L KN +EL R + + + I I+ +N I F Sbjct: 487 SNIEAEIQSSSKEFGDNDPYLKTFLKYKNIKELNRGILIELIDAIYIHENN-EITIQFKF 545 Query: 477 GIVFKHYPLM 486 +K Sbjct: 546 ADQYKRLKEF 555 >UniRef50_B7IRZ6 Resolvase domain protein n=17 Tax=Bacillales RepID=B7IRZ6_BACC2 Length = 546 Score = 305 bits (782), Expect = 3e-81, Method: Composition-based stats. Identities = 94/548 (17%), Positives = 194/548 (35%), Gaps = 71/548 (12%) Query: 2 KKAIAYMRFSSPGQMS-GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ- 59 K Y R S+ Q G S++ Q R++ E+ K YL Y D G+S GK+ Sbjct: 8 KTVAIYARVSTIEQAEEGYSIDEQLRVLNEFCKSEG--YLVYDEYVDRGIS---GKNISG 62 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 A L+ E +LV ++RL+R+ + + + ++ + + I + + Sbjct: 63 RPAVQRMLNDAEQKKFE---VVLVWKMNRLARKSL-DLMNIVEKLNSKNIAFRSYTEKYE 118 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 P ++ L+A A E + VK+ + ++ +G + +S Sbjct: 119 TET-----PPGKLQFQLMAAIAEYERNNIAENVKMGMIARAKEGRWNGGQVLGYDVVEIS 173 Query: 180 LDDKRTA---FVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSV 236 D+++ V + T++LIF++ +IA +N + GK + + Sbjct: 174 SDNRKRKDTHLVINEREANTVQLIFQMYGSGHGYKSIANCINKKGYRTKKGK--TFSLNA 231 Query: 237 IEKLLANKALIGICVPSYRAR---------GKGISEIAGYYPRVISDDLFYAVQEIRLAP 287 I+ ++ N G + R G + +IS++++ Q + + Sbjct: 232 IKIIVTNPVYAGYIRYNVRKDWNEKRRNNINPNPIIQKGEHEPIISEEVWQVAQNVYQSR 291 Query: 288 FGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLH-------GYYVCPMRRLHR-- 338 N + L +M+C ACG M++ + +L YYVC + Sbjct: 292 SCKPN--RIHDGEFPLTGIMRCPACGAGMVISPTTNTLKDGTKRVLEYYVCGSWKNKGTL 349 Query: 339 -CDRPSIKRDLVDYNIINELLFNCSKIQPVEN---------------KKDANETLELKII 382 C ++ + D +++L + ++ + E ++ Sbjct: 350 VCRSNGVRTEYADAFTLDKLQRLMHSDKLIKELVKSVNSRNGKKFAPLQKEFEMYAKQMN 409 Query: 383 ELQMKINNLIVAL-SVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDL 441 E + K++ A EK + L+ +++ ++ L+ + + + ++ Sbjct: 410 EAEQKLSKTFDAYTDELISKAMYVEKAKRLEGQIQELKELMEPLRKQIQGNTVKVVSYEM 469 Query: 442 TSKNG------------RELCRTLAYKTFEKIIINTDNKTCDIYFM-NGIVFKHYPLMKV 488 + RE + L + KI IN D K I N V K + Sbjct: 470 IKEVLLNFSKAFQNALTREQRKRLLHLLIHKITINEDRKIESIQLKFNNEVLKELKIEVD 529 Query: 489 ISAQQAIS 496 + S Sbjct: 530 DLSNDKSS 537 >UniRef50_C0X7M1 Cassette chromosome recombinase B n=5 Tax=Enterococcus faecalis RepID=C0X7M1_ENTFA Length = 470 Score = 305 bits (781), Expect = 3e-81, Method: Composition-based stats. Identities = 93/491 (18%), Positives = 185/491 (37%), Gaps = 51/491 (10%) Query: 2 KKAIAYMRFSSPGQM-SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 KKA Y+R S+ Q G S+ Q + ++++ Y D G SA K + Sbjct: 9 KKAAIYIRVSTQEQATEGYSIQAQTDRLTKYVEAKDFIL--YKKYIDAGYSASK---LER 63 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 A E + ++ + ++V LDRLSR + + + +++I++ ++ Sbjct: 64 PAMQELIQDVQSKKV---DVVIVYKLDRLSRSQKDTMYLIEDIFRPNDVELISMQESFDT 120 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTA--SCPRWL 178 + + +++ A E + S R+ ++ + P Sbjct: 121 STAFGSATVG-----MLSVFAQLERKSISERMITGRVERAKKGFY---HTGGQDRPPAGY 172 Query: 179 SLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIE 238 + V + I+ +F+L + ++I++YL KN+ GK W PS I Sbjct: 173 QFNSD-NQLVINEYEAAAIKDLFRLYNDGLGKSSISEYLK----KNYPGKN-KWLPSSIH 226 Query: 239 KLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPM 298 ++L N IG S +E G + +I + FY Q+ ++K Sbjct: 227 RMLKNSLYIGKVKFS-------GAEYDGIHEPIIDEVTFYKTQKEIARR--KQTNTKRYN 277 Query: 299 LINLLRTVMKCEACGNTMIVHA---VSGSLHGYYVCPMRRLH--------RCDRPSIKRD 347 + LL + +C CG M G ++ YY C ++ C + ++ Sbjct: 278 YVALLGGLCECGICGAKMANRRSVGRKGKVYRYYRCYSKKGSPIHMMKIDGCPSKAQQQF 337 Query: 348 LVDYNIINELL--FNCSKIQPVENKKDANETLELKIIELQMKINNLIVALS-VAPEVTAI 404 ++D +IN L ++++ + + +I + +IN LI + + I Sbjct: 338 IIDEAVINNLKNIDVEAELKKRSAPQTNTSLISSQIESIDKQINKLIDLFQVDSMPLDVI 397 Query: 405 AEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDL---TSKNGRELCRTLAYKTFEKI 461 +EKI L+KE + L+ +AI + E R + +K+ Sbjct: 398 SEKIDKLNKEKQSMEKLLERKNKLDKTELQHRFAILKSFDWDNSSIESKRAVIEMLVQKV 457 Query: 462 IINTDNKTCDI 472 II+ ++ + Sbjct: 458 IIHDNSIEIIL 468 >UniRef50_C7G6N5 DNA integration/recombination protein n=2 Tax=Clostridiales RepID=C7G6N5_9FIRM Length = 552 Score = 305 bits (781), Expect = 3e-81, Method: Composition-based stats. Identities = 90/502 (17%), Positives = 177/502 (35%), Gaps = 62/502 (12%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 +A+ Y R+SS GQ +S+ Q R E+ K + + Y D A G+ + Sbjct: 27 RAVIYARYSSSGQRE-ESIEGQLRDCYEFAKKHG--IIVIGEYIDK---AMTGRVDRRPD 80 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F + E G +L+ +DR +R + A+ + K + +GI + + Sbjct: 81 FQRMMKDSEKGR---FNCVLLWKMDRFARNRYDSAMYKYK-LKKNGIRIFYAKETI---- 132 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 + P +I ++ A SE + VK + G L Sbjct: 133 --PDGPEGIILESVMEGYAEYYSENLAQNVKRGNYDSALELKTLGKTC-----LGLKTGP 185 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 ++ D + IF+ E I + LN + G + + + ++L+ Sbjct: 186 D-GRYMIDQAEAAIVRRIFEEYAEGERAKDIYERLNSEGYRTSRG--GKFNKNSLRRILS 242 Query: 243 NKALIGICVPSYRARGKGISEIAGYYPRVI-SDDLFYAVQEIRLAPFGISNSSKNPMLIN 301 NK IG+ + P +I DLF VQ++ K Sbjct: 243 NKKYIGVYEY-------EDIYVENGIPAIITDRDLFERVQKMLKINHDAPARGKAQN--F 293 Query: 302 LLRTVMKCEACGNTMI---VHAVSGSLHGYYVCPMRRLHR-CDRPSIKRDLVDYNI---- 353 LL T + C CG+ MI + +G + YY C R+ R C + S+ +D ++ + Sbjct: 294 LLTTKLFCGLCGSPMIGDGGTSHTGKAYAYYSCTKRKRGRSCKKESVPKDWIEDLVVGEL 353 Query: 354 ---------INELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTAI 404 I ++ + Q E + LE++ E + I+N++ A+ + Sbjct: 354 VKIVHNDELIEQIADRVMEYQKREKDQSGLHALEIRQKENEKAISNMLAAIEAGIITPST 413 Query: 405 AEKIRLLDKELRRASVSL--------KTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYK 456 ++ L+ + + + + + + F + D+ + R + L Sbjct: 414 KTRLMELEADRADIEKGIAHELLAEPEFERDQIIYFLERFRSGDINDEAYRIM---LVDT 470 Query: 457 TFEKIIINTDNKTCDIYFMNGI 478 + + D+ + +G Sbjct: 471 FLNSVYLYDDDHLVLVMNYSGE 492 >UniRef50_B6FLN0 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLN0_9CLOT Length = 536 Score = 304 bits (780), Expect = 4e-81, Method: Composition-based stats. Identities = 82/542 (15%), Positives = 174/542 (32%), Gaps = 80/542 (14%) Query: 4 AIAYMRFS-------SPGQMSGDSLNRQRRLIAEWLKVNS-DYYLDTITYEDLGLSAFKG 55 Y+R S S + DS+ QR LI +L + + + D G + G Sbjct: 7 IGIYIRLSMADEDTGSGNKAESDSIGNQRMLINRYLDNHPTLSQYPRLEFADDG---YTG 63 Query: 56 KHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLC 115 + FS ++ + HG I + V+ R SR+ + G+ I++ Sbjct: 64 TNFHRPQFSAMMEKVRHGEI---NLICVKDFSRFSRDYIETGNYLECTFPFMGVRFISIN 120 Query: 116 DNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCP 175 D D ++ ++ + S+ S + + + + G + P Sbjct: 121 DGYDS--DDYKGTTGGLEVVMRSIIYAAYSKDLSVKTTTAKIQMMKQ----GKYVGGYAP 174 Query: 176 RWLSLDDK-RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNF----SGKES 230 L + R DP+ + + +F ++ R+ + IA LND + GK Sbjct: 175 FGYVLHPEIRNKLKLDPEAAEVVRRVFNEALKGRNTSQIALGLNDDNIPTPGQYFKGKNP 234 Query: 231 ------------AWGPSVIEKLLANKALIGICVPSYRA------------RGKGISEIAG 266 +W S++ K+L + G V R + + + G Sbjct: 235 DKKKYSRMSEKISWTASMVYKILTSYVYTGATVGHKRKSGGVGSRKTISQKKEDWIIVEG 294 Query: 267 YYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLH 326 + ++S + F Q + G + K + L+ ++ C C + + Sbjct: 295 MHEAIVSKEEFELAQAVI---RGGEKNPKRNLRYYPLKGLVCCGNCKRALTRRKLRNEGG 351 Query: 327 GYYVCPMR---RLHRCD-RPSIKRDLVDYNIINELLFNCSKIQPVENKK----------- 371 +Y C R C ++ + + ++ K+ Sbjct: 352 YFYQCTHSTHDRDTDCPVGERYSEAWIEDTAYKAIGQMLTLVEKKAVKEHEISKRRKSAI 411 Query: 372 ----DANETLELKIIELQMKINNLIVALSVA-PEVTAIAEKIRLLDKELRRASVSL---- 422 D L+ + +L+ L + ++ D ++ ++ Sbjct: 412 TECADTIRDLQKQSEQLKAVKLRLYEKYTSGSITKAEYLKRKAETDAKMSENEEAIQQGH 471 Query: 423 ---KTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIV 479 + L S+ S A+ + G L LA+ I ++ + + +I +M + Sbjct: 472 ERMQELDSEHPCSDERLDAVLGEYQKGEGLTYELAHALISAIYVHGHD-SIEIVWMFKDI 530 Query: 480 FK 481 F+ Sbjct: 531 FE 532 >UniRef50_D0LQK1 Resolvase domain protein n=12 Tax=Haliangium ochraceum DSM 14365 RepID=D0LQK1_HALO1 Length = 537 Score = 304 bits (779), Expect = 5e-81, Method: Composition-based stats. Identities = 88/528 (16%), Positives = 169/528 (32%), Gaps = 74/528 (14%) Query: 2 KKAIAYMRFSSPG--QMSGDSLNRQRRLIAEWLKV--NSDYYLDTITYEDLGLSAFKGKH 57 K+A Y R S+ +SL+ QR +++K + + L Y+D G F G + Sbjct: 16 KRAAIYTRKSTGKGLDRDFNSLDAQREACEQYIKSQAHQGWQLVETHYDDGG---FTGAN 72 Query: 58 AQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDN 117 AF+ L ++ G I ++V LDRLSR + A + + + N Sbjct: 73 IDRPAFARLLRDVDAGKI---DIIVVYKLDRLSRSLLDFA-NLISRFNQTDTAFVAVTQN 128 Query: 118 TVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRW 177 S + + ++ A E E+ S R + R+ G P Sbjct: 129 F-----STADAIGRLTLNILMSFAEFEREMISERTRDKVAGSRKR----GKWTGGPLPVG 179 Query: 178 LSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESA------ 231 + DK+ + + + IF + S+ IA+YLN+ + + Sbjct: 180 YASRDKK--LIVVEREARIVREIFARYLRGDSVFEIARYLNESGRRKPARTSRTGHVLAK 237 Query: 232 --WGPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFG 289 W + + L N G G + +I + F RLA Sbjct: 238 REWDKGSVLRALKNPVYAGFMRFG-------GELFEGEHKAIIDRESFEQA-AARLAANC 289 Query: 290 ISNSSKNPMLINLLRTVMKCEACGNTM----IVHAVSGSLHGYYVCPMRRLHR---CDRP 342 SN+ K P +L + C CG+ M +G L+ YY C ++ C Sbjct: 290 ASNAPKVPRDDYVLSGRLFCVLCGSAMTPKSTTKRRTGKLYRYYQCVVKDKSGHDACPAR 349 Query: 343 SIKRDLVDYNIINELLFNCSKIQPVENKKDANET--LELKIIELQMKINNLIVALSVAPE 400 + ++ ++ + + + E + L + + + + Sbjct: 350 PLPAAGIEAYVVERIRVVTAGGALARDVAARVEAHGARRRAELLAERTARASEIAARSAD 409 Query: 401 VTAIAEKIRLLDKELRRA-SVSLKTL---------------------KSKGVNSFSDFYA 438 A+ + + LD RR L + + + Sbjct: 410 GRALLDTLVGLDASARRLVEERLGEIGRSVAEAERELAEAERALLALDEQQTEAQWTAST 469 Query: 439 IDLTSKNGRELCR----TLAYKTFEKIIINTDNKTCDIYFMNGIVFKH 482 ++ + + + L +I +N + + + + FKH Sbjct: 470 LEHFADVWKVMTPGNRIRLVQALVRRIEVNEPRQEIRVVLHD-LEFKH 516 >UniRef50_D1NLU0 Resolvase domain protein n=3 Tax=Clostridiales RepID=D1NLU0_CLOTM Length = 537 Score = 304 bits (778), Expect = 8e-81, Method: Composition-based stats. Identities = 99/528 (18%), Positives = 192/528 (36%), Gaps = 75/528 (14%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 K+ AY R S+ +S N Q++ E+++ N ++ L Y D G++ + + Sbjct: 3 KRVCAYCRVSTDKDDQINSFNSQKQFFEEYIRKNEEWELVD-IYADEGITGTSTE--KRT 59 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F ++ +++ I +L + + R +R + ++I + + + G+ VI + D Sbjct: 60 EFLRMIEDVKYKKI---DLILTKEISRFARNTL-DSIYYTRKLKSMGVGVIFINDG---- 111 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 I++L+E L I+ A A EES S RVK K++ + + G + + Sbjct: 112 INTLDEDAELRLTIM-ASIAQEESRRISQRVKWGQKRQMEKGVVFGRELLG-------YN 163 Query: 182 DKRTAFVPDPDRVKTIELIFKLRM-ERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 + + + + +IF E + + IA+ L + +K G W ++I K+ Sbjct: 164 LRNGVLTINEQEAEIVRMIFHKFTNEGKGTHVIARELYEAGIKTKRG-NLNWSNTMILKV 222 Query: 241 LANKALIGICVP----------SYRARGKGISE---IAGYYPRVISDDLFYAVQEIRLAP 287 L N+ +G + KG E I ++ +IS +L+ A Q+ Sbjct: 223 LRNEKYVGDLCQKKTITPDFLSHKKKYNKGQEEMIYIKNHHEPIISRELWEATQKELEKR 282 Query: 288 FGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVS---GSLHGYYVCPMRRLHR------ 338 + C CG+ + G + + C H Sbjct: 283 TTSREQKSKYSNRYWCSGKIICGLCGSRFVGRLKKLKNGDTYRAWRCQKAAEHGREKIDK 342 Query: 339 ------CDRPSIKRDLV---------------DYNIINELLFNCSKIQPVENKKDANETL 377 C++ SI ++ IIN+L K + K+ N L Sbjct: 343 WGNTIGCNQESINHVVLGEIIGYILKNVIVDNKEEIINDLKALIKKYEKPVKIKNTNTLL 402 Query: 378 ELKIIELQMKINNLIVALSVAPEVTAIAEKIRL-LDKELRRASVSLKTLKSKGVNSFSDF 436 +I + K LI ++ + DKE+ +K ++ +N+ Sbjct: 403 -KQIENINTKKQKLIDSMLEGIISKQDVAMMNEKYDKEIEELRQKVKEIEEANINNQKQA 461 Query: 437 YAIDLTSKNGRELCR--------TLAYKTFEKIIINTDNKTCDIYFMN 476 + ++ + KT EKII++ D +IYF Sbjct: 462 DMLKSYIDRIHKIVNDLENNNPEEIYKKTVEKIIVHKDKI-LEIYFNC 508 >UniRef50_B5EDN9 Recombinase n=1 Tax=Geobacter bemidjiensis Bem RepID=B5EDN9_GEOBB Length = 545 Score = 303 bits (776), Expect = 1e-80, Method: Composition-based stats. Identities = 136/543 (25%), Positives = 232/543 (42%), Gaps = 70/543 (12%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 M +A +Y+RFS P Q GDSL RQ E+ ++ LD ++ DLG SA++G HA+ Sbjct: 1 MARAFSYLRFSRPEQRKGDSLRRQTEAAREYADRHNLA-LDDFSFRDLGHSAYRGSHAEI 59 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 G S+FL AI+ G++ PG LL+E+ DRLSR+ + EA + L+ I N GI V+TL D +Y Sbjct: 60 GGLSQFLAAIDTGHVKPGDYLLIENFDRLSRQVLDEAFDLLRTICNKGISVVTLQDGNIY 119 Query: 121 NIDSLN-EPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 + +SL+ SL+ A+ RA++ES +KS R+ +W KR+D +T P WL Sbjct: 120 DKESLSRNFASLMWALFAFARAHDESAVKSDRLLSTWHNKRKDMRV--KPLTGKLPGWLR 177 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNF---SGKESAWGPSV 236 L ++ DR + ++ IF +E +S I LN + V+ + K W S Sbjct: 178 LSAEK-QITVIEDRAEVVKEIFTRYVEGQSPRTIVNRLNQNNVECWGIGKQKSKKWNSSY 236 Query: 237 IEKLLANKALIGICVPSY------RARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGI 290 I+K+L N+++IG P + + + Y+P +I + F VQE+R + Sbjct: 237 IQKILDNESVIGRFTPHKIMFEGIKKTRVPLETVNDYFPVIIDAETFNRVQEVR-TRNKL 295 Query: 291 SNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHG-YYVCPMRRLH---------RCD 340 L N + +C CG+ ++ + + Y VC + C Sbjct: 296 GRRKATGGLTNAFSMLFRCPVCGSWLVRVNKNSKSNWQYLVCGAAKAGYRDADSGYRLCP 355 Query: 341 R--PSIKRDLVDYNIINEL---LFNCSKIQPVENKKDANETLELKIIELQMKINNLIVAL 395 +++ D+V+ ++ + F S +E + A E + E + NL A+ Sbjct: 356 GGYKAVRYDVVEQAFVDAVLCGRFISSTGSALEAVEAAIEAQRKRREESLRRSTNLTNAI 415 Query: 396 SVA---------PEVTAI-----------------------AEKIRLLDKELRRASVSLK 423 + ++ AE++ LL ++ A ++++ Sbjct: 416 AEGALKGSSPVIKDLEKYSLEVVGPADDDLQIVGKVEHWTVAEELELLASAIKGAEIAIE 475 Query: 424 TLKSKGVNSFSDFYAIDLTS--------KNGRELCRTLAYKTFEKIIINTDNKTCDIYFM 475 L+ I L + R+ L + +N D K Sbjct: 476 RLELDREALKPRTVDIKLRELKMAVCGPEIDRQKINMLLQALCDSSELNADTKEMTFNLR 535 Query: 476 NGI 478 + Sbjct: 536 HAD 538 >UniRef50_UPI0001C37E79 resolvase, n-terminal:recombinase, putative n=2 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37E79 Length = 531 Score = 303 bits (776), Expect = 1e-80, Method: Composition-based stats. Identities = 92/524 (17%), Positives = 182/524 (34%), Gaps = 66/524 (12%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 + AY R S+ + +S Q + + N ++ L + D G+S + K + Sbjct: 20 RVAAYCRVSTEQEEQQNSYQVQIDYYTDLINKNREWEL-AGIFADEGISGTQTK--KRTE 76 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F++ + + I +L +S+ R +R V + +E ++ + + GI V+ +N Sbjct: 77 FNKMIRLCKKRKI---DLVLCKSISRFARNTV-DTLEYVRQLKDLGIGVVFEKENINTLT 132 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 S L A ESE S V +K +D + + Sbjct: 133 -----MTSEFMIALYGSFAQAESESISKNVSWGVEKAFRDGK---VRYSYNNLYGYRKGA 184 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 P+ + + LI+K+ ++ +L IA++L D + + + W + +L+ Sbjct: 185 D-GKPEIIPEEAEVVRLIYKMYLDGSTLRQIAQHLTDLKI--PKRECTEWNLIAVRSILS 241 Query: 243 NKALIG----------ICVPSYRARGKG---ISEIAGYYPRVISDDLFYAVQEIRLAPFG 289 N+ +G C+ +A+ G + + +I D + VQ+ Sbjct: 242 NEKYVGDALLQKTYTVDCITHKKAKNNGERAKYLVTDAHDAIIDRDTYNLVQQEMTRRSS 301 Query: 290 ISNSS-------KNPMLINLLRTVMKCEACGNTMIVHAVS--GSLHGYYVCPMRRLHR-- 338 + S L +M C CG+ + G + C R + Sbjct: 302 LRKKSDKCVTAQGKYSGKYALTEIMVCGECGSAYRRQTWNIHGRKCPVWRCVSRFDNGNR 361 Query: 339 -CD-RPSIKRDLVDYNIINELLFNCSKIQPVEN-------------KKDANETLELKIIE 383 C PSI D + I++ + ++ + ++ ++ E Sbjct: 362 YCKQSPSIHEDKLHKAILSAINEYYDCKDNIKELLKSNVEQAMAGVSLKETKEIQKRLRE 421 Query: 384 LQMKINNLIVALSVA-PEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLT 442 + N+ I ++ + A+ E+ + L E + + LK L+ + I+ Sbjct: 422 IDDTRNDYITLIAAGTMDEEALDEQFKKLYTEEQDLNFRLKALEENNDIDNNKRTRINQA 481 Query: 443 SKNG-------RELCRTLAYKTFEKIIINTDNKTCDIYFMNGIV 479 KN E L K E I +N+ I F GI Sbjct: 482 LKNIDNSSCVLTEYNDMLVRKLIECIKVNS-KTEITIIFKGGIE 524 >UniRef50_D2KRD2 Putative integrase n=1 Tax=Lactobacillus phage phiPYB5 RepID=D2KRD2_9CAUD Length = 450 Score = 303 bits (776), Expect = 1e-80, Method: Composition-based stats. Identities = 74/427 (17%), Positives = 150/427 (35%), Gaps = 56/427 (13%) Query: 3 KAIAYMRFSSPGQMS-GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 K Y+R S+ Q G S+ Q + + +V + Y D G F G Sbjct: 7 KIAVYVRVSTLEQAESGYSIGEQTEKLTAYCRVKD--WQVAKIYTDPG---FSGSSLDRP 61 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 A + + + G +LV LDRLSR + + + I ++L +N + Sbjct: 62 AMQQLIGDCKLG---VFDAVLVYKLDRLSRSQKDTLYLIEDVFNAYNIHFMSLSENFDTS 118 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 P+ L++ A E E R+++ + + ++ P + Sbjct: 119 T-----PFGKAMIGLLSVFAQLEREQIKERMQMGKLGRVKAGK---ISAWSNVPFGYTKV 170 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 ++ DP R + I+ + +S+ I K LN GK AW + ++L Sbjct: 171 KD--SYDVDPLRADIVRRIYADYLAGKSITKIMKELNREGHI---GKGVAWSYRTVRQVL 225 Query: 242 ANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAP----FGISNSSKNP 297 N G + + G + +IS + VQ + SN+ + Sbjct: 226 GNVTYTGRIIFKGQVY-------DGLHTGIISKADWDEVQRVLKIRQLDQARKSNNPRPF 278 Query: 298 MLINLLRTVMKCEACGNTMIVHA--VSGSLHGYYVCPMRRLHR---------------CD 340 +L ++KC CG T+ + YVCP R ++ C+ Sbjct: 279 QARYMLSGLLKCHYCGATLAIAKSHTKNGPLWRYVCPTRHANKYHRNNAARYRIPPVNCE 338 Query: 341 RPSIKRDLVDYNIINELLFNCSKIQPVENKKD------ANETLELKIIELQMKINNLIVA 394 +D ++ ++ E+ V +D + ++ ++ +++ + L+ Sbjct: 339 LTYKYKDDLEEAVLREVKKVALDPDAVVASQDDGQPKIDKQAIKAQLAKIKRQQAKLVDL 398 Query: 395 LSVAPEV 401 ++ ++ Sbjct: 399 YLLSDDL 405 >UniRef50_C0EU70 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EU70_9FIRM Length = 528 Score = 302 bits (775), Expect = 2e-80, Method: Composition-based stats. Identities = 77/543 (14%), Positives = 169/543 (31%), Gaps = 85/543 (15%) Query: 3 KAIAYMRFSSPG------QMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGK 56 KA+ Y+R S +S+ QR +++++ ++ + Y D S G Sbjct: 4 KAVLYLRLSKEDRNKVNKGDDSESIINQRIMLSDYAMRHN--FQVVKIYSDDDES---GL 58 Query: 57 HAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCD 116 + FS+ + E G ++ +S R +R + G+ I + D Sbjct: 59 YEDRPGFSQMMQDAERGL---FDIIIAKSQSRFTRNLEHSEKYLHHKLPLWGVRFIGVVD 115 Query: 117 NTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPR 176 + + + + E S V+ + K G + +SCP Sbjct: 116 GVDTM-----DENNKMTRQVKGLTNEWYCETLSKNVRSVFLSKMNQ----GKFVGSSCPY 166 Query: 177 WLSLD-DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKE------ 229 D + + D + IF+L +E IA L+ + S + Sbjct: 167 GYMRDSEDHNHLIIDEYAANIVRKIFRLYLEGNGKAHIASILSSENILIPSLYKTRVLQQ 226 Query: 230 -----------SAWGPSVIEKLLANKALIGICVPSYRAR------------GKGISEIAG 266 W + +L N+ +G V + + + Sbjct: 227 NYYNSKLKDTTKTWCYQTVHMILNNQTYLGKMVQHKDIKISYKDKKKRRLPKEQWIVVDN 286 Query: 267 YYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLH 326 + +I + F VQ I+ N N+ ++ C C + M + Sbjct: 287 THEPIIDQETFDRVQAIQKIKRKSVN---TEYSDNIFAGILFCADCKHAMNRAYAKENKK 343 Query: 327 GY--YVCPMRR---LHRCDRPSIKRDLVDYNIINELL---------FNCSKIQPVENKKD 372 G Y+C + + C IK + ++ +++ + + S + V+ Sbjct: 344 GSIGYICKIYKTMGKKHCPSHMIKNEELEEAVLSSIKNEARKILTEDDISDLDKVQKIDS 403 Query: 373 ANETLELKIIELQMKINNLIV--------ALSVAPEVTAIAEKIRLLDKELRRASVSLKT 424 + + +I + ++ + + ++E+ + + Sbjct: 404 REQFYKKQIQIVDAELEKYQKFKKRAFTGYMEEMITPQEYRSYVAEYEEEISKLERQKEE 463 Query: 425 L------KSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGI 478 + ++ N ++ N +L R + + EKI ++ D DIY+ Sbjct: 464 ILTKLADENSLQNQHDEWVEAFKDYINIEKLTRDVVIELIEKIEVHEDGG-LDIYYRFRN 522 Query: 479 VFK 481 F+ Sbjct: 523 PFQ 525 >UniRef50_B3Z2D3 Cassette chromosome recombinase B n=2 Tax=Bacillus cereus group RepID=B3Z2D3_BACCE Length = 467 Score = 302 bits (775), Expect = 2e-80, Method: Composition-based stats. Identities = 85/471 (18%), Positives = 165/471 (35%), Gaps = 38/471 (8%) Query: 3 KAIAYMRFSSPGQ-MSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 K + Y R S+ Q G SL+ QR + ++ K ++ Y D G + K+ + Sbjct: 2 KCVIYRRVSTDMQVEEGISLDMQRLRLEQYAKSQG--WVVVNDYCDEG---YSAKNTERP 56 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 AF + + ++ +LV LDR +R V + LK++ + + + + Sbjct: 57 AFQQMIKDMKKKQ---FDIILVYRLDRFTRS-VSDLHSILKMMDEYNVKFKSSTEIFDTT 112 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 + + L+A A E E + RV+ S KK + L +G A P + Sbjct: 113 TAT-----GRMFITLVATLAQWERETTAERVRDSMHKKAELGLRNG----AKAPMGYDV- 162 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 K+ + + ++ IF++ + + + +I K LN VK GK + + ++ Sbjct: 163 -KKGNLYINHTEAEIVKYIFEMY-KTKGVISIVKSLNSRGVKTKRGK--TFNYDAVRYII 218 Query: 242 ANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLIN 301 N IG + + I D +Y VQ+++ + +N Sbjct: 219 NNPIYIGKIRWGDDILTDIAQK---DFETFIDKDTWYTVQQVQDSRKIGKVRLQNF---F 272 Query: 302 LLRTVMKCEACGNTMIVHAV---SGSLHGYYVCPMRR-LHRCDRPSIKRDLVDYNIINEL 357 + V++C CG + + Y C R CD P + D+++ +N L Sbjct: 273 VFSNVLRCSRCGKHFLGSKQVRAHNRIVMGYRCSSRHHKGTCDMPQVPEDVLEKEFLNLL 332 Query: 358 LFNCSKIQPVENKKDANETLELKIIELQMKINNL-IVALSVAPEVTAIAEKIRLLDKELR 416 ++ E K L+ + +Q K L + + + + L +E Sbjct: 333 EDAIIDLEDTEEKPIELSNLQEQYNRIQDKKARLKYLFIEGDIPKNEYKKDMLTLTQEEN 392 Query: 417 RASVSLKTLKSKGVN-SFSDFYA--IDLTSKNGRELCRTLAYKTFEKIIIN 464 L + + D E + I ++ Sbjct: 393 IIQKQLANITDTASPFEIKELLNQLKDEWYNLNNESKKAAVNAIVSSITVD 443 >UniRef50_C6GWI0 Site-specific recombinase n=1 Tax=Streptococcus suis BM407 RepID=C6GWI0_STRS4 Length = 524 Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats. Identities = 89/531 (16%), Positives = 182/531 (34%), Gaps = 72/531 (13%) Query: 1 MKKAIAYMRFSSPGQM--SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHA 58 M +A Y+R S +S+ QR L+ ++ + + L+ + D G+S Sbjct: 1 MAQACIYLRLSRDDGDNVESNSIINQRSLLRDYARNHDITILE--EFVDDGISGLT---F 55 Query: 59 QSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNT 118 F+ ++ I + I T++V+ L R R+ + ++ G+ I++ D+ Sbjct: 56 NRPDFNRMMENINNKTI---DTIIVKDLSRFGRDYIETGKYIQRIFPAMGVRFISVNDHY 112 Query: 119 VYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWL 178 NE + ++ + + + S++V+ + K KR G + A P Sbjct: 113 DSLTADANETHLVMP--IKSLINDSYCRDISTKVRSTHKAKRLK----GEFIGAFAPYGY 166 Query: 179 SLDD-KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNF------------ 225 D ++ V D IE IF L++E S N IA YLN ++ Sbjct: 167 QKDPRQKNHLVVDESIRSIIEKIFTLKLEGYSSNQIAIYLNQCGIETPLQHKKRNQEKLR 226 Query: 226 --SGKESAWGPSVIEKLLANKALIGICVPSYRAR------------GKGISEIAGYYPRV 271 G + WG ++ ++L N+ G R + + + + + Sbjct: 227 GFCGHTNKWGTKMVNRILTNRVYTGALEQGKRTKLNYKAQHTIKVNQEDWICVEATHEGI 286 Query: 272 ISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHA--VSGSLHGYY 329 IS+ F + L + N ++ C C ++ + Sbjct: 287 ISESTFKIANSLLLRDVK-----NSNNQPNEFAGLLFCNDCHAQLLQRKIRYKNKETIQF 341 Query: 330 VCPMRRLH-RCDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLELKIIELQ--- 385 +C C R +IK + + + +EL+ N + KK + +++E+ Sbjct: 342 ICSTYNKGRGCSRHAIKYEELISIV-SELIENHLDWKSHLIKKIPEYLSQEQLLEIDFTN 400 Query: 386 -----MKINNLIVAL-----SVAPEVTAIAEKIRLLDKELRRASVSLKTLKS------KG 429 K L+ +L E R ++L+ ++ K Sbjct: 401 LVSDRRKYEQLLQSLYMDLDDGLINEAEYQEFQRSYRQKLKDIEQTIVNKKKLAQELVNK 460 Query: 430 VNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVF 480 + + + K L R ++I I+ +N+ + F + Sbjct: 461 LQNKKTWLKKLTCQKEESSLNRLTLVTLLDRINIS-ENQEISLVFHDLNEI 510 >UniRef50_A6NVA4 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NVA4_9BACE Length = 588 Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats. Identities = 87/508 (17%), Positives = 162/508 (31%), Gaps = 77/508 (15%) Query: 36 SDYYLDTITYEDLGLSAFKGKHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVG 95 D Y D G F G + F L I +G + +LV+ L RLSR Sbjct: 79 EDGIEFVGYYIDDG---FTGVDSDRDDFQRLLTDIHNGKV---NCVLVKDLSRLSRNDWE 132 Query: 96 EAIERLKLILNHGIDVITLCDNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLS 155 L + + I+L + + Y + + S +V+ + Sbjct: 133 CKYYLQMLFVKMNVRFISLELPKLDSFKRPEGVYE-LDVSFQSMYNENHCRETSIKVRGT 191 Query: 156 WKKKRQDALESGTIMTASCPRWLSLD-DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIA 214 KKR+ G + A P D + V +P+ ++ IF+ ME S +AI Sbjct: 192 LDKKREK----GQFIGAFAPYGYLKDPEDYHHLVVNPETAPVVKDIFRWYMEGMSKSAIT 247 Query: 215 KYLNDHAVKNF------------------SGKESAWGPSVIEKLLANKALIGICVPSYRA 256 K L + + G W ++++L N IG V Sbjct: 248 KELIRLGIPSPYEYKRQHGMKCFNPQAVKKGGVVYWSTRTVDQILHNPTYIGDMVQGRHK 307 Query: 257 ------------RGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLR 304 + G + +I D F VQ++ +S N + L Sbjct: 308 VTSYKIHDIIPVDEADWFWVEGTHEAIIDADTFQKVQDLMSRNTRVSPKRNN---LYLFS 364 Query: 305 TVMKCEACGNTMIVHAVSGSLHGYYVCPMRR---LHRCD--RPSIKRDLVDYNIINELLF 359 ++C CG M+ ++ G + YY C R C +IK D++ + + Sbjct: 365 GFLRCADCGRGMVRNSAHG--YTYYSCRTYRTLSKDLCTGGSHNIKEDIIAEAALKAIQA 422 Query: 360 NCSKIQPVENKKDANET----------LELKIIELQMKINN-------LIVALSVAPEVT 402 + ++ + + ++ + + + ++ L + Sbjct: 423 QIALVENMAEVIKEINSAPTRISRTIFIDNLLKDKERELQKTAGISDSLYMDWKNGDITR 482 Query: 403 AIAEKIR-LLDKELRRASVSLKTLKSKGVNSFSDFYAID------LTSKNGRELCRTLAY 455 +++ E + ++ LK + + D L KN +EL R + Sbjct: 483 EEYHRMKARFQTEAEQLKQAIANLKEERKEYEKEVTTDDPYLTTFLKYKNIKELDRNIVV 542 Query: 456 KTFEKIIINTDNKTCDIYFMNGIVFKHY 483 + I I+ D +I+F K Sbjct: 543 DLIDVIYIHADKG-VEIHFKFQDQHKRL 569 >UniRef50_B0SYD9 Resolvase domain n=2 Tax=Alphaproteobacteria RepID=B0SYD9_CAUSK Length = 579 Score = 301 bits (772), Expect = 3e-80, Method: Composition-based stats. Identities = 79/454 (17%), Positives = 161/454 (35%), Gaps = 59/454 (12%) Query: 3 KAIAYMRFSSPGQMSGD-SLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 +A Y+R S+ Q D SL QRR + + + Y + G +A + Sbjct: 15 RAAVYLRVSTGRQAEHDLSLPDQRRQLDAYCAGKG--WKVATEYLEPGNTAT---DDKRP 69 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 AF + ++A P +LV S R R++ ++ + +G+ V+++ Sbjct: 70 AFQDMIEAAMT-KPAPFDVILVHSFSRFFRDQFQFEFY-VRKLAKNGVKVVSITQ----- 122 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 + ++P S + ++ +S+ + K+ + +G + P + Sbjct: 123 -ELGDDPMSHMMRKIMTLFDEYQSKENGKHTLRAMKENARQGFWNG----SRPPLGYRVI 177 Query: 182 -------DKRTAFVPDPDRVKTIELIFKLRMER------RSLNAIAKYLNDHAVKNFSGK 228 + DP + + + I+KL + L +IA YLND+ V+ G Sbjct: 178 IAEQRGAKLKKKLEIDPIQAEKVRRIYKLALFGVDGSGPLGLKSIATYLNDNNVRTKDG- 236 Query: 229 ESAWGPSVIEKLLANKALIGICVPSYRARGKGISEIAGYY-----PRVISDDLFYAVQEI 283 +G + K+L G ++ + + P ++++D + AVQ+ Sbjct: 237 -GRFGIDAVHKVLTRTTYKGEHRFNFTDHKNRARKPDEEHAVAKIPAIVTEDEWQAVQDH 295 Query: 284 RLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMR---RLHRCD 340 +S+ LL + C CG M + + YY C + C Sbjct: 296 LKLRSPTCMASRFVTSQVLLGGICFCGLCGGAMTLRTGKNGRYRYYTCSTKARMGKSGCT 355 Query: 341 RPSIKRDLVDYNIINELLFNCSKIQP---------------VENKKDANETLELKIIELQ 385 ++ D +D ++N L + VE ++ L + E Sbjct: 356 GITVPMDKLDDAVVNHLERRLLQPDRLCMLMGNVLDRRHEWVERRRSHVAELRKRSTEAA 415 Query: 386 MKINNLIVALSVAP---EVTAIAEKIRLLDKELR 416 K+ L A+ ++++IR L+ + Sbjct: 416 NKLVRLYAAIEDGLVGHGSEGLSDRIRELEAIKK 449 >UniRef50_C6CZ73 Resolvase domain protein n=7 Tax=Bacillales RepID=C6CZ73_PAESJ Length = 493 Score = 301 bits (772), Expect = 4e-80, Method: Composition-based stats. Identities = 85/502 (16%), Positives = 180/502 (35%), Gaps = 58/502 (11%) Query: 4 AIAYMRFSSPGQM-SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 Y R S+ Q G SL+ Q + + + + Y D G + K+ Sbjct: 16 VALYCRVSTDEQAREGVSLDEQVERLKAYCRAMG-WSEQVQIYIDDG---YSAKNLDRPE 71 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 L A++ G + ++V LDR+SR ++ + + + L +H + +++ ++ Sbjct: 72 LKRLLHAVKSGAVSR---IMVTKLDRMSR-RLLDLLNIIDLFQDHEVSFVSISESFDT-- 125 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 N P + ++ A E E RV + +G +T P L D Sbjct: 126 ---NTPSGRLTLQVLGAVAEFERERIRERVFENMLHAA----TTGKWLT-QSPYGYDLVD 177 Query: 183 KRTAFVPDPDRVKTIELIFKLRM-ERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 + V + + ++ ++ + + E +IAK LN+ V + KE W I+ +L Sbjct: 178 --KSLVVNIVESQIVKRVYDMYLNEGLGFYSIAKRLNEEGVPSRHRKE--WSIRAIKLML 233 Query: 242 ANKALIGICVPSYRARGK---------GISEIAGYYPRVISDDLFYAVQEIRLAPFGISN 292 N A G V + + K + P +I ++ VQ+ P I+ Sbjct: 234 TNPAYKGTLVWNRKDSSKTQRKDKDEAEWVSVEECLPVIIDQPMWDKVQQRINQPSNIAP 293 Query: 293 SSKNPMLINLLRTVMKCEACGNTMIV--HAVSGSLHGYYVCP-MRRLHRCDRPSIKRDLV 349 +K +LL +++C CG+ M + + Y C + C + D V Sbjct: 294 RAKTS--PHLLGGMLRCGNCGSGMSIGFSGSPNKRYRVYRCSANKNKGTCTSKQYRADEV 351 Query: 350 DYNIINELLFNCSK-------IQPVENKKDANETLELKIIELQMKINNLIVALSVA-PEV 401 + L + + E LE K+ + + + A + E+ Sbjct: 352 EAWFKEGLKQLVENKTGALTIMAKEAMVRSEREQLEQKVSTARARYKRKVEAYTSGLIEL 411 Query: 402 TAIAEKIRLLDKELRRASV---------SLKTLKSKGVNSFSDFYAIDLTSKNGRELCRT 452 + E+ LD+ ++ +++ L+ + + ++ I E + Sbjct: 412 EDLNEEKARLDQFVQELEKMSGGEIEPVNMEQLQLELNSKVNNI--ISAMDLLPVEQAKG 469 Query: 453 LAYKTFEKIIINTDNKTCDIYF 474 + + ++++ + +I Sbjct: 470 IIQTLVQYVVVHGEE-DIEIRL 490 >UniRef50_Q3DFF9 Site-specific recombinase, resolvase family, putative n=5 Tax=Bacteria RepID=Q3DFF9_STRAG Length = 448 Score = 301 bits (771), Expect = 4e-80, Method: Composition-based stats. Identities = 79/381 (20%), Positives = 145/381 (38%), Gaps = 41/381 (10%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 + AY R S+ S Q +++ + DY L Y D G+SA K + A Sbjct: 14 RVAAYCRVSTDQDEQLSSYENQVSYYRDYILKHEDYELVD-IYADEGISATNTK--KREA 70 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F+ + G + +LV+S+ R +R + + I+ ++ + GI V +N I Sbjct: 71 FNRLIQDCRAGKV---DRILVKSISRFARNTL-DCIKYVRELKELGIGVTFEKEN----I 122 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 DSL+ ++ IL + A +ES S +KK + G + + D Sbjct: 123 DSLDSKGEVLLTIL-SSLAQDESRSISENATWGIRKKFER----GEVRVNTTKFMGYDKD 177 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 + V +P++ + ++ I++ ++ S +IAK LN + +K +SGK + W PS I K+L Sbjct: 178 ENGKLVINPEQAEVVKHIYQQFLKGYSPESIAKELNTNGIKGWSGKAN-WYPSSILKMLQ 236 Query: 243 NKALIGICVPSYRARGK-------------GISEIAGYYPRVISDDLFYAVQEIRLAPFG 289 N+ G + + + +I +++ VQE Sbjct: 237 NEKYKGDALLQKTYTVDFLTKKRTENDGQVNQYYVTNNHEAIIDTEMWDTVQEELAXRKD 296 Query: 290 ISNSSKNPMLI-----NLLRTVMKCEACGNTMIVH--AVSGSLHGYYVCPMRRLHR---- 338 K I N T + C CG+ S + C R + Sbjct: 297 FREKHKLKTYIMQSDDNPFTTKVFCAECGSAFGRKNWTTSRGKRKVWQCNNRYKVKGQIG 356 Query: 339 CDRPSIKRDLVDYNIINELLF 359 C I ++++ + + Sbjct: 357 CQNNHIDEEMLEKAFMKAVEL 377 >UniRef50_Q1J4R7 Site-specific recombinase n=9 Tax=Bacteria RepID=Q1J4R7_STRPF Length = 497 Score = 301 bits (771), Expect = 5e-80, Method: Composition-based stats. Identities = 85/521 (16%), Positives = 177/521 (33%), Gaps = 71/521 (13%) Query: 1 MKKAIAYMRFSSPG---QMSGDSLNRQRRLIAEWLKVNSDYYLDT-ITYEDLGLSAFKGK 56 M K Y+R S +S+ QR + ++L N ++ T Y D G + G Sbjct: 1 MSKIALYIRLSVEDMIKTDESESIINQRAYLNDYLDKNEEFKNFTREEYVDDG---YSGT 57 Query: 57 HAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCD 116 + AF L+ ++ I T++V+ L R R+ + + G+ I + D Sbjct: 58 NENRPAFQRMLEDVKKNNIQ---TIIVKDLSRFMRDYITLGDYLENIFPFLGVRFIAIND 114 Query: 117 NTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPR 176 N + + + + ++ S +VK S ++ G + S P Sbjct: 115 GYDSNKE--KGNGTDLDIQFKGLLYDFYTKDISEKVKSSMTTLKKQ----GKFLAWSPPL 168 Query: 177 WLSLD-DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKES----- 230 D + R + D + ++ IFKL ++ S IAK LND + S ++S Sbjct: 169 GYMKDPNDRHKIIVDEETAWIVKKIFKLALDGISSRNIAKILNDEKIPTPSKRKSELTNL 228 Query: 231 ---------------AWGPSVIEKLLANKALIGICVPSYRAR------------GKGISE 263 W + +LAN+ G + + + + Sbjct: 229 DFEYSIIRTAKKPRPTWTNGNVIDVLANENYTGTYTFNMQDKSVLNPTSFKFKPKEEWGR 288 Query: 264 IAGYYPRVISDDLFYAVQEIRLAPF--GISNSSKNPMLINLLRTVMKCEACGNTMIVHAV 321 + + +IS + F VQ+I+ N+ + L+ KC C + + Sbjct: 289 VENNHEAIISKEDFEKVQKIKEKNLFMKGKNTDYEWRKKSPLQGFAKCPTCNHILGCTQS 348 Query: 322 SGSL-------HGYYVCPMRRLHRCDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDAN 374 H Y+ C + + + + + ++ + + P++++K Sbjct: 349 KRKRQDGTMRVHTYFTCRICKCNNVKHKNSRAGSLEEQVFEAIKEKYGLEDPIKDEKVKV 408 Query: 375 ETLELKIIELQ-MKINNLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSF 433 + +E I +L+ K+ + + +D+EL+ ++ K + Sbjct: 409 KPMEKSIEDLEAKKMQSFEKYKLGKMNRQKFIDLKNSIDEELQAIKEKIQKAKEEKEVI- 467 Query: 434 SDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYF 474 + +L R L K + + + I+ Sbjct: 468 -----------DNTKLTRELMEKYIDSVFCEGNEVLNIIWK 497 >UniRef50_UPI0001BC4A50 recombinase n=2 Tax=Fusobacterium RepID=UPI0001BC4A50 Length = 537 Score = 301 bits (771), Expect = 5e-80, Method: Composition-based stats. Identities = 99/507 (19%), Positives = 191/507 (37%), Gaps = 52/507 (10%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 ++A+ Y RFSS Q +S++ Q R I ++ K N+ Y Y+D G+S K Sbjct: 3 RRAVGYCRFSSDSQRE-ESIDAQLRAIRDFCKQNN--YDLIKVYKDEGISGTSTK--DRE 57 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 +F + ++ + ++V DR +R + AI K++ ++ + ++++ + Sbjct: 58 SFLQLIEDSKK---NMFDYVIVHKFDRFARNRYDHAIY-EKILNDNKVKLLSVLERL--- 110 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 + P S+I ++ S S +K + A+ P LD Sbjct: 111 ---NDSPESIILKSVLTGMNEYYSLNLSREIKKGLNENALKAM----HTCGIPPLGYDLD 163 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 + R ++ + + + LIF L + +IA+ LN+ + KN G+E + + I L Sbjct: 164 ENR-RYIINEKEAEAVRLIFSLAADGIGFASIARTLNERSYKNKRGRE--FKKTSIRDTL 220 Query: 242 ANKALIGICVPSYRAR----GKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNP 297 N+ IG S + R + I +P +I LFY VQ KN Sbjct: 221 LNQKYIGTYFHSLKNRDGTFRRDPILIENAHPAIIEKSLFYKVQTRFKNHLKGPRDRKNT 280 Query: 298 MLINLLRTVMKCEACGNTMIVHAVS----GSLHGYYVCPMRRLHR--CDRPSIKRDLVDY 351 L +C CG + S GS+H Y C RR C I +++++ Sbjct: 281 T--YYLTGFCRCGECGGSFSGGYRSAHIDGSVHYGYECRKRRAKENNCKNKPIFKEVLEP 338 Query: 352 NIINELLFNCSKIQPVE---------------NKKDANETLELKIIELQMKINNLIVA-L 395 I+ + + +E +++ E +I +L + L+ L Sbjct: 339 VILELIKSEIFAEENMEILVKDISEVIKKYKISQEQEEEYYVKEIEKLNKMVLKLLDKNL 398 Query: 396 SVAPEVTAIAEKIRLLDKELRRASVSLKTLK--SKGVNSFSDFYAIDLTSKNGRELCRTL 453 +K + L++ + L +L+ + Y + L + + L R + Sbjct: 399 EGFLSDEIFRKKNKELNERILIMKEKLYSLETLDQLKEDNLRKYLLKLKNDSTHSLNRKI 458 Query: 454 AYKTFEKIIINTDNKTCDIYFMNGIVF 480 ++II D+ + + Sbjct: 459 VESFLHEVIIYQDHIEVTLRRFPKQIL 485 >UniRef50_Q5L1L1 Site-specific recombinase (Resolvase family) n=3 Tax=Bacillaceae RepID=Q5L1L1_GEOKA Length = 490 Score = 300 bits (770), Expect = 6e-80, Method: Composition-based stats. Identities = 97/518 (18%), Positives = 176/518 (33%), Gaps = 68/518 (13%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 + Y+R SS SL Q+ L ++ + Y D G A+ Sbjct: 2 RCGVYVRVSSDKLEQQASLQYQKELFYNYIADKG--WDLYEVYID----VESGTTAKRKN 55 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 +D + I +L + L RL+R + + L NHGI +ITL D + + Sbjct: 56 LQRLIDDAMNKKI---DVILAKELSRLARNG-ELSYQIKNLCENHGIHIITL-DGAINTL 110 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 + A +E++ S RVK + K + + G ++ P ++ D Sbjct: 111 QGNTHMFGP-----YAWMYEQEAQRTSERVKETLKTRAKK----GLFKGSTPPYGYTIKD 161 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNF---SGKES---AWGPSV 236 + D + + IF + ++IA+ L + + +GK++ W S Sbjct: 162 GKLHIR-DDETPNIVRRIFNEYLAGYGRDSIARRLYNEGIPTPAEVAGKKNAGDKWNDST 220 Query: 237 IEKLLANKALIGICVPS------------YRARGKGISEIAGYYPRVISDDLFYAVQEIR 284 I+ +L N G V +A + + I + +I D+F AVQ Sbjct: 221 IKLILTNPHYTGDLVQGRTTTVSVTSNKRKKASNEELIIIPNAHEPIIPRDVFEAVQHQM 280 Query: 285 LAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMR---RLHRCDR 341 + K +L + C CG M + YVC C Sbjct: 281 KLRSKTIPAPKR----HLFTNIAYCADCGKGMWYRSNRKG----YVCGGYARFGKKACSS 332 Query: 342 PSIKRDLVDYNIINELLFNCSKIQPVENKKDANE-------TLELKIIELQMKINNLIVA 394 IK +++ II+++ +I K E +++ K+ ++ +I+ L Sbjct: 333 HVIKEEVLKQTIIHDIQSLMQQIDKEYYLKQLEEKAKQSQLSVQKKLDKINKQIDALKSR 392 Query: 395 LSVAPEV--------TAIAEKIRLLDKELRRASVSLKT---LKSKGVNSFSDFYAIDLTS 443 E+ + I +KE+ VS K K V + Sbjct: 393 KRKYIELLADEKIIQEDYQDMIEANNKEINELVVSKKESLLSSHKVVENIQKLKQELAQF 452 Query: 444 KNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFK 481 N EL + ++ ++I I D Y + + Sbjct: 453 LNFDELTPEILHRLIDRIEIKADGTPKIFYRFSAPKIE 490 >UniRef50_B0TCI6 DNA recombinase, putative n=20 Tax=Bacteria RepID=B0TCI6_HELMI Length = 525 Score = 300 bits (770), Expect = 6e-80, Method: Composition-based stats. Identities = 88/521 (16%), Positives = 160/521 (30%), Gaps = 62/521 (11%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 + AY R S+ SL Q++ + ++ N ++ Y D G+S K Sbjct: 22 RVAAYCRVSTDNDDQLLSLEAQKQHYEKIIRDNPEWEF-AGLYCDEGISGT--KKENREG 78 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 L E I ++ +S+ R +R + +E ++ + GI + +N Sbjct: 79 LLRLLRDCEKHKI---DFIITKSISRFARNTA-DCLEIVRRLSELGIFIYFEKENINT-- 132 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 + S + +++ A ES S K K++ Q +GT +S P Sbjct: 133 ---HSMDSELLLSVLSSLAENESVSISQNNKWGVKRRFQ----NGTFKLSSPPYGYIYC- 184 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 VP P+ ++ IF + R +A+A+ LN + GK W S + +L Sbjct: 185 -NGTIVPHPEEAAVVKRIFAEILTGRGTHAVAEGLNADGINPARGK--KWTASAVRGILE 241 Query: 243 NKALIGICVPSYRARGKGISE-----------IAGYYPRVISDDLFYAVQEIRLAPFGIS 291 N+ +G + I ++ +IS + F A + I Sbjct: 242 NEKYVGDSLFQKTYTDDNFIRHYNHGEEEMYYIKDHHEAIISREDFEAAKRILAQRSREK 301 Query: 292 ---NSSKNPMLINLLRTVMKCEACGNTMIVH---AVSGSLHGYYVCPMR---RLHRCDRP 342 + + + C CG+ A + + C + C Sbjct: 302 GIEKGTGKYLNRYAFSGRIICGECGSVFKRRIHMANKPGQYVAWCCSKHIASKTKDCSMV 361 Query: 343 SIKRDLVDYNIINEL-------------LFNCSKIQPVENKKDANETLELKIIELQMKIN 389 I+ D + + + L K Q ++ KI E + Sbjct: 362 YIRDDRIKEAFVLMMNKLYSNHNIILKPLVEAMKEQDASGSYAKIREIDAKIEENAERAQ 421 Query: 390 NLIVALSVAPEVTAIAEKI-RLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKN--- 445 L+ L+ + K L E R L + S + K Sbjct: 422 ILVSFLTKGYLDPVLFNKQNNELKAETARLREQRAALAASSAGGLSALSEAEALLKYLSK 481 Query: 446 ----GRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKH 482 E L + E I + + G+V K Sbjct: 482 EGGIIEEFDEFLFERFVEGITVFSP-AEIGFRMKCGLVLKE 521 >UniRef50_C6LFU1 Site-specific recombinase n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LFU1_9FIRM Length = 496 Score = 300 bits (770), Expect = 6e-80, Method: Composition-based stats. Identities = 87/504 (17%), Positives = 168/504 (33%), Gaps = 62/504 (12%) Query: 4 AIAYMRFSSPGQMS-GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 A Y+R S+ Q G S+ Q + + K S D G S Sbjct: 21 ADLYIRVSTTEQAEEGYSVEAQEAKLQAYCKAMSYTINRVCI--DPGYSGTS---MDRPG 75 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 E + + +LV LDRLSR + I + L + D I++ ++ + Sbjct: 76 LQELITDVRSNRCKK---ILVWKLDRLSRSQKDTLILLEDVFLANSCDFISVMESFDTST 132 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 P+ ++A A E E R L +K + G + P D Sbjct: 133 -----PFGRCIVGILAAFAQMERENIRIRTTLGRVEKIRK----GYFSGSHAPLGYKFKD 183 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSV-IEKLL 241 + +P + +F+L + L+AI +Y+ D + + W + I ++L Sbjct: 184 GCNELLVNPYTSIMVREVFRLFLSGTGLSAIGRYMLDK----YGPGQYDWAKNTAIRRIL 239 Query: 242 ANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNS------SK 295 +N +G + G + +IS+ +Y + I Sbjct: 240 SNPVYMGKVRLN-------GELFDGIHEAIISETDWYMAAALLEHNKAIDKRSYRYALGT 292 Query: 296 NPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMR--------RLHRCDR--PSIK 345 NLL ++ C CG M VS + Y+C + + C Sbjct: 293 PGRGDNLLTGLLFCGDCGARMYARKVSKTKKK-YICHSVARTSAAMIKSNHCSNRLHPYT 351 Query: 346 RDLVDYNIINELLF-NCSKIQPVENKKDANET-------LELKIIELQMKINNLIVALSV 397 + +D IINE+ + + + + ++ +I E+ + L+ Sbjct: 352 VEELDAVIINEIKKLSIDRSYFDSMVERCRDEKPLDFSAIQERIAEIDKQTGRLLNIYQT 411 Query: 398 A-PEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKN------GRELC 450 + I+ ++ L +E + +L + S + D L + E Sbjct: 412 GLVCLEEISARLGTLKEEKEKLQQNLLSSDSATASCSLDATWKSLQGFSAIIASGDLEAM 471 Query: 451 RTLAYKTFEKIIINTDNKTCDIYF 474 + L + +K+++ ++ T F Sbjct: 472 QRLIHSLIDKVVVLNNDITIYWSF 495 >UniRef50_Q2BR60 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BR60_9GAMM Length = 544 Score = 300 bits (770), Expect = 6e-80, Method: Composition-based stats. Identities = 139/506 (27%), Positives = 213/506 (42%), Gaps = 44/506 (8%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 KA +Y+RFS Q GDSL RQ I + N+ L T T+EDLG+SA+KG +A +GA Sbjct: 2 KAYSYIRFSKQSQAQGDSLRRQTEAIRSYCTKNNL-TLSTQTFEDLGISAWKGANADTGA 60 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F+ E G I +LLVE+LDRLSRE V +A L +L+ + +ITL D VY+ Sbjct: 61 LGAFIKGCESGAIQTPCSLLVENLDRLSREHVRKAFGLLLQLLDLDVTIITLMDEKVYSP 120 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 D + L+ A+ R EES+ KS RV+ + + KR+ L T +CP+WL L+ Sbjct: 121 DC--DQMDLMVALTYMSRGAEESQTKSDRVRKAKQAKREKTLAGEVKFTGNCPKWLKLNK 178 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKN----------------FS 226 F P+ V+T++ I+ +R + + I K LN+ ++ + Sbjct: 179 DTQTFEEIPEFVETLKRIYDMRSKGYGIVKILKTLNEEGIRAFGLKIVKDENGEPVKDKT 238 Query: 227 GK----ESAWGPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQE 282 GK S W + + L ++A+IG I Y+P VI +LFY VQ+ Sbjct: 239 GKVKKVPSKWSQTTVVNYLKSRAVIGEYQL-KERGVPVGDPITDYFPTVIDPELFYRVQD 297 Query: 283 IRLAPFGISNSSKNPMLINLLRTVMKCEACGNTM---IVHAVSGSLHG---YYVC--PMR 334 + N L ++ C CG + V G H Y C Sbjct: 298 TFT----KVTKGRTTTFRNALTGLLSCHVCGGPIKFDHVPPKKGRKHAPNQYLRCKSTYE 353 Query: 335 RLHRCDRPSIKRDLVDYNII---NELLFNCSKIQPVENKKDANETLELKIIELQMKINNL 391 R C + I V ++I L FN + E LE I+ + K+NNL Sbjct: 354 RKTTCFKGMINYSGVLSSVIAMTAYLNFNKINSEDYEALTAKLAELETNRIDTEAKLNNL 413 Query: 392 IVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSK-----GVNSFSDFYAIDLTSKNG 446 + + L L + + K+K + ++DL S+ G Sbjct: 414 SAVIQAGVTAPNFVKDANRLSSSLDEIKTDIDSTKAKLSSVEPSEAMKSIDSLDLESEQG 473 Query: 447 RELCRTLAYKTFEKIIINTDNKTCDI 472 R + +KI + ++ Sbjct: 474 RRDLNLFLKQYIKKIEVTKNDVYVTF 499 >UniRef50_A4BP41 DNA invertase n=12 Tax=Bacteria RepID=A4BP41_9GAMM Length = 624 Score = 300 bits (770), Expect = 7e-80, Method: Composition-based stats. Identities = 85/535 (15%), Positives = 167/535 (31%), Gaps = 84/535 (15%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 MK A Y R SS Q +++ Q + E+ + D ED G F G Sbjct: 1 MKIAAIYARVSSDQQKGANTIASQTAALIEFAREQGFTVPDEWIIEDEG---FSGASLLR 57 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 D G I +L+ S DRLSR+ + + + HG++ I + Sbjct: 58 PGLERLRDLAAEGQIQA---VLIHSPDRLSRKYAYQVL-LTEEFARHGVEAIFIKAPH-- 111 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 P + A E R + + + + + P Sbjct: 112 ----SATPEDQLMLQFQGMIAEYERAQILERSRRGKRHRAKSGE---ISVLGGAPYGYRY 164 Query: 181 ----DDKRTAFVPDPDRVKTIELIFKLR-MERRSLNAIAKYLNDHAVKNFSGKESAWGPS 235 + + D + L+F+ ++ S+ AIA+ L + + + W S Sbjct: 165 IRKMPETPARYEIDAAEAAVVRLVFEKYTVDGLSIGAIARLLREMGPPTRR-RVTRWERS 223 Query: 236 VIEKLLANKALIGICVPSYRA--------------------------RGKGISEIAGYYP 269 V+ +L N A G + I P Sbjct: 224 VVWGMLRNPAYKGTACFNKTQVGPRQKVTKPFRLSGRSVHGEKTSAHERPREEWIEVPVP 283 Query: 270 RVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIV--HAVSGSLHG 327 ++S++ F E + + + +L++ ++ C CG + S Sbjct: 284 ALVSEETFALAAERLADNKRF--APRRTIEPSLVQGLVSCRKCGYALYRASTRTSARKIH 341 Query: 328 YYVCPMRRLHR------CDRPSIKRDLVDYNIINELLFNCSKI--------------QPV 367 YY C R CD I++DL+D+ + E++ + + Sbjct: 342 YYRCLGSDGWRHLGGSVCDSRPIRQDLLDHIVWQEVMRLIADPGLINAELDRRLDAARAS 401 Query: 368 ENKKDANETLELKIIELQMKINNLIVAL-SVAPEVTAIAEKIRLLDKELRRASVSLKTLK 426 E K + +E + L ++ L+ A + + ++ L + L+ + Sbjct: 402 EPTKKRQDAVERDLTRLSKSMDRLVTAYQEDLVSLDELRGRMPELRAREQGLKSELQAIF 461 Query: 427 SKGVNSFS---------DFYAIDLTSKNGREL--CRTLAYKTFEKIIINTDNKTC 470 S+ + S F S E+ + + ++++++ D T Sbjct: 462 SQAADRMSFLRLAETLTAFLQRLRESAETLEISDRQRIVRLLVKEVLVDDDTITI 516 >UniRef50_A9WCX4 Resolvase domain n=2 Tax=Chloroflexus RepID=A9WCX4_CHLAA Length = 507 Score = 300 bits (769), Expect = 8e-80, Method: Composition-based stats. Identities = 75/481 (15%), Positives = 143/481 (29%), Gaps = 58/481 (12%) Query: 4 AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAF 63 A+ Y R S+ Q S+ Q E+ + N + + G Sbjct: 3 AVIYARVSTEEQGDNFSIPAQLAACREYAERNGLQVVAEC------IDTMSGARLDRPGL 56 Query: 64 SEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNID 123 + D + + ++V DRLSR + + N I + Sbjct: 57 QQVRDLVSQQLVQA---VIVYHQDRLSRN-LAHFLYLRDEFQNARIALHFTTLGQ----- 107 Query: 124 SLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDK 183 + + P + +I A E R K + + G + Sbjct: 108 ARDTPEDKLIQNMIGSFAEHERLRIIERTKQGRRARLLSGKPLG--LGNHPAYGYHWHGT 165 Query: 184 RT--AFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESA-----WGPSV 236 + + + IF +E IAK L D V G+ W + Sbjct: 166 KHDRHLHINEAEAAIVRRIFAWALEGVPTQRIAKLLTDMGV-TPRGRAGRPPRPEWDHTT 224 Query: 237 IEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKN 296 + +L N G Y A + P ++ + + AVQE + + +N Sbjct: 225 VAGMLRNPVYKGQY---YSAAHNLFVPV----PAIVDAETWEAVQEQLTRN--QAMAKRN 275 Query: 297 PMLINLLRTVMKCEACGNTMIVH----AVSGSLHGYYVCPMRRL---HRCDRP-SIKRDL 348 + LR ++C CGN M + SG + YY+C + C+ S + + Sbjct: 276 AKRVYSLRGRIRCGICGNRMSGNGAGTRASGKTYHYYMCHAAKGALIASCNHGTSYRAER 335 Query: 349 VDYNIINELLF---------------NCSKIQPVENKKDANETLELKIIELQMKINNLIV 393 ++ + ++ ++ E + +I E + LI Sbjct: 336 LEALVWQWVIETVLDETRLVRAIEAARANEAGQREALEHERAAYARQIAEAGTRTARLIE 395 Query: 394 ALSVAP-EVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRT 452 + + +A + + + + A L + ++ S D R L Sbjct: 396 LYTAGVCTLDEVAATKKQYELQRQSAQRELDRIDAQLAALNSHHANRDALLAMARALKAA 455 Query: 453 L 453 L Sbjct: 456 L 456 >UniRef50_A5TXM5 Possible recombinase n=3 Tax=Fusobacterium RepID=A5TXM5_FUSNP Length = 510 Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats. Identities = 94/507 (18%), Positives = 182/507 (35%), Gaps = 51/507 (10%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 M++A+AY RFSS Q +S++ Q R I E+ N+ + Y+D +S K Sbjct: 1 MRRAVAYCRFSSSNQRE-ESIDAQIRAIKEYCNKNNFKLI--RIYKDEAISGTSTK--DR 55 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 F E + + ++V DR +R + A+ K++ ++ + +I++ + V Sbjct: 56 EMFLEMILDCKKNL---FDCVIVHKYDRFARNRYDHALY-EKILNDNNVKLISVLEQLVD 111 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 + P S+I ++ S+ S VK K+ A+ +G P L Sbjct: 112 -----DSPESIILKSVLTGMNEYYSKNLSREVKKGKKENALKAIHNG----GIPPLGYDL 162 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 D + + + ++LIF+L ++ +IA LN KN GKE + I Sbjct: 163 DKNKKYIINK-KEAEAVKLIFELALDGVGYVSIADILNKKGYKNKRGKE--FRKISIRDT 219 Query: 241 LANKALIGICVPSYR----ARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKN 296 L N IG + K I + +I D+FY VQ + Sbjct: 220 LLNIKYIGTYYYGLKDGHGKLQKEPIIIENSHEPIIDKDIFYKVQAKMKKNLKGPRNRNG 279 Query: 297 PMLINLLRTVMKCEACGNTMIV----HAVSGSLHGYYVCPMRRLH--RCDRPSIKRDLVD 350 L C CG +GS+ Y C ++ +C+ +I+++L++ Sbjct: 280 --QFYFLTGYCICGECGGPFSGGYRTVNRNGSISYGYYCQKKKRKETKCNNKAIRKELIE 337 Query: 351 YNIINELLFNC---------------SKIQPVENKKDANETLELKIIELQMKINNLIVAL 395 I + + K++ + +I +LQ + L+ Sbjct: 338 SFIFDIIKKEVFSDDKIEKIIKDIISFSKNKNIKKEEEIKEYTKEIEKLQKMLLRLLEKN 397 Query: 396 SVAPEVTAIAE-KIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGREL--CRT 452 V I K L++ ++ + ++K+ + ++ K R Sbjct: 398 LEGHVVDEIFNVKNTELNERIQVLREKIYSIKNITEINENELREYLKKFKESANEHGKRK 457 Query: 453 LAYKTFEKIIINTDNKTCDIYFMNGIV 479 + ++I + D + + Sbjct: 458 VVEAFVQEIRVYRDKIKIALRKFPKDL 484 >UniRef50_UPI0001C3223C Resolvase domain protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3223C Length = 509 Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats. Identities = 79/495 (15%), Positives = 155/495 (31%), Gaps = 62/495 (12%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 + + Y R S+ G+ SL+ QR + + V D+ + ED G Sbjct: 2 RVVVYTRISTDGENQPTSLHSQRERLEAFCSVQEDWRIVAHH-EDR----STGTRLDRAG 56 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 L+ G LLV +DRLSR KV + + + + G+ + + + Sbjct: 57 LQAALNLARRG---GADLLLVYRVDRLSR-KVRQLAQLAEELDGLGVVLKSATEPFDT-- 110 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 + ++ A E R+ +++ + G P + Sbjct: 111 ---GSAAGRMMLQMLGVFAEFEHATIVDRITAGIERRAKQ----GYWPNGRVPYGYTRTR 163 Query: 183 KRTAFVPDPDRVKTIELIFKLRMER-RSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 + A VPD + IF L +IA+ L + + + W P+ + +L Sbjct: 164 DK-ALVPDEREAPIVRRIFALYTTGRLGSVSIARQLTTEGIPS---RGRGWLPAKVLTIL 219 Query: 242 ANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLIN 301 AN+A IG + G + +I D F + Sbjct: 220 ANEAYIGRVHWREQT-------FDGRHEPLIDTDTFARAGALLKQRGEDCARRVGERSDF 272 Query: 302 LLRTVMKCEACGNTMIV--HAVSGSLHGYYVCPMRRL---HRCDRPSIKRDLVDYNIINE 356 LL V+ C C + +G + YY C R+ CD + +D ++ ++ + Sbjct: 273 LLTGVINCGRCHRAYVGMSARGNGGTYHYYACSGRQKLGRRACDGDRLPKDKLEDAVLRQ 332 Query: 357 LL---------------FNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAP-E 400 L + + ++ + ++ + I A + Sbjct: 333 LADTYRTGTLIQQAIEQASAQDDSERDGIEERRAGIAAEVKRAERAIERYYAAFEAGDLD 392 Query: 401 VTAIAEKIRLLDKELRRASVSLKTLKSKGVNSF----------SDFYAIDLTSKNGR-EL 449 +I L +L + L + + + ++ T + R E Sbjct: 393 AKRFDGRIAALQSQLDTLTDQHDELTHELRDDAPAPPNTRQLRAVAEHLEKTLRAARPEE 452 Query: 450 CRTLAYKTFEKIIIN 464 + L E + +N Sbjct: 453 TKALLRLLIEDLQVN 467 >UniRef50_C9YMD9 Site-specific recombinase, resolvase family, putative n=57 Tax=Bacteria RepID=C9YMD9_CLODR Length = 626 Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats. Identities = 84/541 (15%), Positives = 177/541 (32%), Gaps = 92/541 (17%) Query: 6 AYMRFSSPG--QMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAF 63 Y R S Q +S++ Q++++ ++ + N + + D G+S + F Sbjct: 9 LYERLSRDDELQGESNSISNQKQMLEDFARRNG--LPNPTHFTDDGISGTR---FDRPGF 63 Query: 64 SEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNID 123 ++ +E G + ++++ + RL R+ + + ++++ G+ +I + D Sbjct: 64 LAMMEEVEAGRVEA---IVIKDMSRLGRDYLKVG-QVMEVLRQRGVRLIAINDGVDSLKG 119 Query: 124 SLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDK 183 ++ ++ + I+ + S +++ +K K SG +T + D+K Sbjct: 120 --DDDFTPFRNIMN----EFYARDTSRKIRSVFKSK----GMSGKHLTGTVIYGYLWDEK 169 Query: 184 RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVK----------------NFSG 227 R ++ D + + + IF L +E IA L+ ++ Sbjct: 170 REHWLVDEEAAEVVRRIFSLTLEGYGPYQIAYKLSTDRIEIPVVHLARFNEGVNRSKPVK 229 Query: 228 KESAWGPSVIEKLLANKALIGICVPSYRARG-----------KGISEIAGYYPRVISDDL 276 WG S I +L + +G + + + + +I Sbjct: 230 DPYGWGSSTIVNILKKREYLGHTINFKTRKHFKDKKSHYVSEDEWTIFENTHEAIIDQQT 289 Query: 277 FYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLH-GYYVCPMRR 335 F Q+IR N L ++ C CG M VH + Y C Sbjct: 290 FDLAQKIRSNVRRYPNGWGEAA---PLTGLLYCADCGGKMYVHRTNNGKRVSQYTCSNYT 346 Query: 336 LHRC-----DRPSIKRDLVDYNIINELLFNCS-------------KIQPVENKKDANETL 377 C + I V + + L + V + Sbjct: 347 KVPCGTLCPTQHRINESAVLTLVSDTLRAIAEYSRNDRTEFIHTVQETQVAQQSADISKK 406 Query: 378 ELKIIELQMKINNLIVALSVAPEVTAI----AEKIRLLD----KELRRASVSLKTLK--- 426 ++ Q + L + E A+ + + LD KE + + L+ Sbjct: 407 RRRLAAAQKRAGELEKLICKIYEDNALGKLPDARYKALDAQYAKEQDALEIEIAELEKAV 466 Query: 427 ---SKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINT--------DNKTCDIYFM 475 + S F A+ +N L T+ + EKI+++ + +IYF Sbjct: 467 TGYEQSQKSAEKFIALIDKYENFDTLTNTMLNEFVEKILVHERARKGSQDTTQEIEIYFN 526 Query: 476 N 476 Sbjct: 527 F 527 >UniRef50_C7H8C4 TnpX site-specific recombinase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H8C4_9FIRM Length = 578 Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats. Identities = 86/568 (15%), Positives = 188/568 (33%), Gaps = 98/568 (17%) Query: 2 KKAIAYMRFSSPGQMS-------GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFK 54 K Y R S +S+ Q+ ++ E+ K + + + D G S Sbjct: 34 KITALYCRLSVEDTKEKGGKDDPSNSIQHQQIMLMEYAKSQH--FPNPTYFIDDGYSG-- 89 Query: 55 GKHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITL 114 + F L IE G++ ++ + L RL R + +G+ I + Sbjct: 90 VEFNNRPGFQRMLAEIEAGHVE---VVITKDLSRLGRNSSLTGLYINYTFPQYGVRYIAI 146 Query: 115 CDNTVY-NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTAS 173 D+ + +S + A + ++ S +++ K K E G +T + Sbjct: 147 NDHFDTIDPNSTDND----IAGIKNWFNEFFAKDTSRKIRAVNKAK----GERGERLTTN 198 Query: 174 CPRWLSLD-DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGK---- 228 P + D A++ D + + ++ IF L ME + + IA L V N + Sbjct: 199 IPYGYKRNPDDPKAWIVDEEAAQVVKRIFALCMEGKGPSQIAALLEKEMVLNPTAYKQRE 258 Query: 229 -----------ESAWGPSVIEKLLANKALIGICVPSYRA------RGKGISEIA------ 265 E W S + +L G V + + + + Sbjct: 259 GRKTPHQAPENEYRWHESTVAYILEYMEYTGCTVNFKTYTNSIWDKKQRENPMENRKIFY 318 Query: 266 GYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVS--G 323 +P +IS ++F VQEIR + + K+ N+ ++ C C + S Sbjct: 319 NTHPAIISLEVFDKVQEIRQQRHRRTATGKS----NMFSGLVFCNDCKQKLYYSTTSYFE 374 Query: 324 SLHGYYVCPMRRLH--RCDRPSIKRDLVDYNIINELLFNCS-------------KIQPVE 368 +++C R + +C I+ +++ + + S + + Sbjct: 375 KRQDFFICSTHRANKDKCSGHYIRAVVLEQIVWKHIQEVVSVVTRYEAYFRSEMEQKLRM 434 Query: 369 NKKDANETLELKIIELQMKINNLIVALSV---------------APEVTAIAEKIRLLDK 413 +++ + ++ + + +I L A E+ + L Sbjct: 435 QSEESLRLSQKRLAQAEKRIGELDRLFIRIYEDNVAGRLDDEHFAMMSKNYTEEQKDLKA 494 Query: 414 ELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNK----- 468 E++ + + + N + S EL + + + ++ +K Sbjct: 495 EVKGLQQQIHEQEQQAENIEQFVQRVKRNS-TLTELTPYALRELVKAVYVDAPDKSSGKR 553 Query: 469 --TCDIYFMNGIVFKHYPLMKVISAQQA 494 I + + + P+ +++ A+QA Sbjct: 554 RQKVHIEY---DLVGYIPVDELLKAEQA 578 >UniRef50_UPI0001C374DA Recombinase n=2 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C374DA Length = 545 Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats. Identities = 91/553 (16%), Positives = 178/553 (32%), Gaps = 93/553 (16%) Query: 4 AIAYMRFSSPGQM--SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 Y R S S+ QR L+ E+ N + + Y D G + G + Sbjct: 10 TALYCRLSQEDLRAGESLSIENQRLLLKEYADKNG--FKNCQYYIDDG---YSGVNKNRP 64 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 A+ + L IE+G I +T++V+ RL R+ + L ++ + I + D + Sbjct: 65 AYVKMLSDIENGLI---STVIVKDQSRLGRDHLETGRLMEILFPSYDVRFIAISDGVD-S 120 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 I+ +N+ IK A + S +++ K K E G + AS P D Sbjct: 121 INGMNDMSG-IKNYFNDFFAQD----TSRKIRTIQKAK----GERGERVGASLPYGYMKD 171 Query: 182 D-KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFS-------------- 226 +PDP+ ++ IF++ + I L + V + S Sbjct: 172 PSDSKRIIPDPETAPVVKHIFEMYANGVGMKKICNTLEEEEVLSPSVYAFNKTGSRSGNP 231 Query: 227 --GKESAWGPSVIEKLLANKALIGICVPSYRARGKGISE------------IAGYYPRVI 272 K AW + + +L N+ G V + + ++ Sbjct: 232 KLDKPYAWSIATVRSMLLNQIYCGDTVNFKTYTKSNKLKKRIKNEPDKVLIFENTHEAIV 291 Query: 273 SDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCP 332 LF VQ+ + + + + + C CG+ + +H + + ++C Sbjct: 292 DRGLFDLVQKHFVGRKRANGNGEMDKY----AGYLYCAECGSRLYLHR-NQKTYNNFMCG 346 Query: 333 M--RRLHRCDRPSIKRDLVDYNIINELLFNCSKIQPV--------------------ENK 370 +R C I+ ++VD ++ + + +N Sbjct: 347 RYEKRKSNCTAHYIREEVVDAVVLEAIQRVTKYARERSDEFYEIAMSNGENEAVSRTKNS 406 Query: 371 KDANETLELKIIELQMKINNLI-VALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKS-- 427 + E KI +L+ I+ L ++ +KE L+ L S Sbjct: 407 EALRNEYETKINQLESAISMLYMDRVTGRVTPERYDSLAAGYEKEQSELKTKLQELDSHT 466 Query: 428 ----KGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIIN----------TDNKTCDIY 473 +F + E+ L ++I ++ ++ T Sbjct: 467 SYLAIKEKCVREFINNAKKYVDVTEVTPQLLRAFIKRIEVHEKAEKRSRNCPNDITVHFS 526 Query: 474 FMNGIVFKHYPLM 486 F+ K +M Sbjct: 527 FLADKEIKLDGIM 539 >UniRef50_UPI000169299B site-specific recombinase for integration and excision n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI000169299B Length = 478 Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats. Identities = 91/479 (18%), Positives = 170/479 (35%), Gaps = 43/479 (8%) Query: 3 KAIAYMRFSSPGQ-MSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 + Y R S+ Q G SL+ Q + ++K + Y D G F K+ Sbjct: 2 RVCKYRRVSTDMQREEGVSLSTQDERLDAFIKSQG--WTVVADYADEG---FSAKNMDRP 56 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 A + + ++ +LV LDRL R V + E L+++ H + + + Sbjct: 57 AIQQLIQDLKRDK---FDVVLVYRLDRLVRS-VSDLHELLQIMDKHDVKFKSCTEVFDTT 112 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 + + +IA A E E + RV + + + + +G A P Sbjct: 113 SAT-----GRMFITIIATLAQWERETIAERVFDNMLARSEKGMRNG----APAPYGYIYK 163 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 D + + K ++ IF + IAK LN +K G W I LL Sbjct: 164 D--GSLELVKEEAKWVKFIFDKY-KTTGSQNIAKTLNKRGIKTRKG--EVWSDFSIRYLL 218 Query: 242 ANKALIGICVPSYRARGKGI--------SEIAGYYPRVISDDLFYAVQEIRLAPFGISNS 293 N G +YR+ KG + +I+ + F +Q + ++ Sbjct: 219 RNPIYAGYVRWNYRSLAKGKCTGDEVIQKIDQDNFQAIITKEEFDEIQILIKERSTVAFR 278 Query: 294 SKNPMLINLLRTVMKCEACGNTMIV---HAVSGSLHGYYVCPMR-RLHRCDRPSIKRDLV 349 S N V KC CGN++ + SG ++ +Y C R R CD P I + + Sbjct: 279 SDNF---YPYSGVAKCAKCGNSLTGAFKNKKSGGIYRFYKCAGRFRTGICDAPVISEEAI 335 Query: 350 DYNIINELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVA-PEVTAIAEKI 408 D ++ L ++ E K E LE ++ ++++K + + +++ Sbjct: 336 DIALMKCLDLPEFDLKYEEQNKIDREQLEKELTKIELKKSRIKELYLDGDISKNEYRKRM 395 Query: 409 RLL--DKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCR-TLAYKTFEKIIIN 464 L D+ + + ++ +++ I + R F + + Sbjct: 396 DSLIDDEIRIQKKLEIEEIEATYEEVLEWMSLIKESWNELSFETRKAAIRTIFSSLTVK 454 >UniRef50_A8SHS8 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SHS8_9FIRM Length = 546 Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats. Identities = 92/541 (17%), Positives = 182/541 (33%), Gaps = 97/541 (17%) Query: 1 MKK---AIAYMRFSSPG------------QMSGDSLNRQRRLIAEWLKVNSDYYLDTITY 45 MKK Y R S S+ Q ++++++ +N +++ TY Sbjct: 1 MKKQYKVGIYCRLSVDDASNSAKAKNYIPGDESASIENQYEILSKFVMLNG--WIEVKTY 58 Query: 46 EDLGLSAFKGKHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLIL 105 D G + G + Q F E L+ HG I +LV+ L RL R+ V + Sbjct: 59 RDDG---YSGGNFQRPGFLEMLEDARHGLI---NLILVKDLSRLGRDFVEVGRYTDVIFP 112 Query: 106 NHGIDVITLCDNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALE 165 + G +++ D D+ + + + + S ++K K++ Sbjct: 113 SLGCRFVSVLDCLDSEGDNTD------MLHFRSLMNDYHLKDLSGKIKSVLYAKKK---- 162 Query: 166 SGTIMTASCPRWLSL-DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKN 224 SG +TA P D+ + V D + + I+++R + IA LN+ ++ + Sbjct: 163 SGQYLTAYAPYGYRKSDEDKHRLVVDEEAATVVREIYRMRCSGMAYGKIAAALNEKSILS 222 Query: 225 FS-------------GKESAWGPSVIEKLLANKALIGICVPSYRARGKGISEI------- 264 W + ++ +L + +GI + + Sbjct: 223 PRWHWELHYGKKGGCKYSKLWTYATVKNILNDTVYLGIVTQNRTGSRSYKDKTMIQKPET 282 Query: 265 -----AGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIV- 318 + ++ L+ AVQE + +++ L L + C CG+ ++ Sbjct: 283 EWICHEDAHEAIVDRKLWEAVQE-KNRAVKQQAANRADPLPALFTGKLVCADCGHPLVAN 341 Query: 319 ----HAVSGSLHGY--YVCPMRRLHR---CDRPSIKRDLVDYNIINELLFNCSKIQPVEN 369 +G++ Y Y C C I + ++NE+ + + EN Sbjct: 342 RETQRRKNGTVKQYVSYFCSHFATTGHSACSWHRIYEISLKTLVLNEIRAHSRAVAQDEN 401 Query: 370 --------------------KKDANETLELKIIELQMKINNLI-VALSVAPEVTAIAEKI 408 K L +I EL+ + L +S A I Sbjct: 402 AVLDKLRQQILSESAARQEDSKLEISRLRRRIGELEHMTSKLYEDKVSGVINGDTFAVLI 461 Query: 409 RLLDKELRRASVSLKTL------KSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKII 462 + ++E + + L+ L + V + + I N +EL R + + + I Sbjct: 462 QKSEQERIQKAERLEVLLAEERKARQEVENIRQWAGIVRRYLNVQELDREIVEELIDHIE 521 Query: 463 I 463 I Sbjct: 522 I 522 >UniRef50_C7H8M7 Site-specific recombinase, resolvase family n=3 Tax=Bacteria RepID=C7H8M7_9FIRM Length = 568 Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats. Identities = 90/558 (16%), Positives = 178/558 (31%), Gaps = 81/558 (14%) Query: 4 AIAYMRFSSP---GQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 Y R S D + Q + ++ L TY D G G Sbjct: 26 TAIYARLSVENSGKSEKVDVIANQIEICKSYIAERPYLNLID-TYVDNGR---TGTVFDR 81 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 F+ ++ I G I L+V L R R+ + ++ G+ I + +N Sbjct: 82 PEFNRLMNDIRTGRIK---CLVVRDLSRFGRDYIEAGTYLERVFPQIGLRFIAIKENYDN 138 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 + + L S+ S +V + K + +ESG + P Sbjct: 139 F--DADGSGESLIIPLQNMINTLYSKDISRKVSTALKAQ----MESGEFKKRNLPYGYRW 192 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNF-------------SG 227 D++ + V D + + IF+ ++E SL AIA L+ N + Sbjct: 193 DEEHSNMVFDEETAPIVRRIFQWKIEGLSLPAIADRLDAMNAPNPEFQKYQVGVRTGNAT 252 Query: 228 KESAWGPSVIEKLLANKALIGICVPSYRAR------------GKGISEIAGYYPRVISDD 275 + W S + +L N +G V + + +IS + Sbjct: 253 AKKIWNKSSLTTILDNPHYVGDTVLGRTLNAIYKGVKNQHIDREEWIVFPNTHEAIISRE 312 Query: 276 LFYAVQEIRLAPFGISNSSKNPMLI------NLLRTVMKCEACGNTMIVHAVS------G 323 F V+E+R A NL + C CG + H G Sbjct: 313 DFQKVREMRNAAARTRVEKMERTEEIRATLINLFEDKIVCADCGRKLYFHRKRVDKRKDG 372 Query: 324 SLHGYYVCPM--RRLHRCDRPSIKRDLVDYNIINELLFNCSKIQ---------------- 365 + + +Y C +R + C ++D ++ +++ + Sbjct: 373 AWYAFYECSSSVKRGNLCTPHYTRQDKLEADVLAAIQLQVKAALNYDKLLAKLRNSEGER 432 Query: 366 -PVENKKDANETLELKIIELQMKINNLIVALSVAP-EVTAIAEKIRLLDKELRRASVSLK 423 + + +L LK+ + K L + + A + D++ S L Sbjct: 433 SIRDQQNALITSLNLKLSGISKKRTRLYEDFTEGILDEEEYAFAKKAYDEQYVDLSRRLD 492 Query: 424 TLKSKGVN-----SFSDFYAIDLTSKNGRE-LCRTLAYKTFEKIIINTDNKTCDIYFMNG 477 + V S + + + S +G L + L ++ E + ++ D + ++ G Sbjct: 493 EAVQRKVKFAEAMSEDNKWLTLMKSVSGATMLSQELVDESVELVKVHEDG-SIELVMKYG 551 Query: 478 IVFKHYPLMKVISAQQAI 495 ++ + + Q+A+ Sbjct: 552 DIY-ALTVQSIKEVQEAM 568 >UniRef50_A0Q362 Site-specific recombinase, resolvase family, putative n=2 Tax=Clostridium RepID=A0Q362_CLONN Length = 524 Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats. Identities = 100/541 (18%), Positives = 186/541 (34%), Gaps = 86/541 (15%) Query: 1 MKKA---IAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNS-----DYYLDTITYEDLGLSA 52 MKK Y R S+ + +S+ Q + + +W+ + D Y YED G Sbjct: 1 MKKVWNVAIYARVSTDKKEQSESIPAQIQGLKKWIMEKNKSGKEDIYNLKEVYEDYG--- 57 Query: 53 FKGKHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVI 112 F G + +F + + I+ G I +L L R +R + G+ + Sbjct: 58 FSGSNFNRKSFIKMKEDIDCGKI---NMVLTRDLSRFARNYIVAGYYLEDYFKEKGVRFV 114 Query: 113 TLCDNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTA 172 ++ DN +D++NE ++ + S R + +++ G+ + + Sbjct: 115 SVLDN----VDTINEVDDIVP--FKNILNEMYIKDCSKRTRDGLRQRMIR----GSSIAS 164 Query: 173 SCPRWLSLDD------KRTAFVPDPDR-VKTIELIFKLRMERRSLNAIAKYLNDHAVKNF 225 P + K VP D + IF L ++ + IA YLN+ ++ Sbjct: 165 KPPYGYKFETTYEGEIKSIKLVPKEDETTDIVREIFSLYIQGYGMGKIATYLNNKGIEPP 224 Query: 226 S--------GKESAWGPSVIEKLLANKALIGICVPSYRARG-----------KGISEIAG 266 S GK W + I +L N GI V + K I Sbjct: 225 SANVKNATKGKSKKWSGNTIRYILTNPKYAGIMVQGRWKKVSYKIKKVKITSKDQWIIGK 284 Query: 267 YYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLH 326 + +IS F VQEI ++L V+KC C +M Sbjct: 285 EFKGIISKKTFKKVQEIINERRKKFRHKDG--NVHLFSGVLKCNECKGSMSYRTKFKG-- 340 Query: 327 GYYVCPM--RRLHRCDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANET-------L 377 Y C R +C SIK + + I+N+L + +I +E + Sbjct: 341 --YKCTNSQRGGGKCTAHSIKEEYLKTAILNDLRRHVLEINDMEEVYELLREKIKGDNNY 398 Query: 378 ELKIIELQMKINNLIVALSVA---------------PEVTAIAEKIRLLDKELRRASVSL 422 E K+ L +++ L + VT I +K + + + + Sbjct: 399 EKKLECLNKQLDKLDGKIQKIYNDKLNGAINYRNFTMLVTIIEQKQENIINKKNKLINKI 458 Query: 423 KT--LKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDN----KTCDIYFMN 476 ++ K + ++ + + ++L R + ++I+++ D K DI + Sbjct: 459 ESNDFKVQEQEIYNYYKNFIDEILSFKDLDRFILENLVDRIVVSEDKERKCKVIDICYKF 518 Query: 477 G 477 Sbjct: 519 K 519 >UniRef50_B4BQU1 Resolvase domain protein n=1 Tax=Geobacillus sp. G11MC16 RepID=B4BQU1_9BACI Length = 520 Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats. Identities = 91/519 (17%), Positives = 187/519 (36%), Gaps = 71/519 (13%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 K +R S+ + SL+ Q+++ + N+ D + G Sbjct: 29 KVAILVRVSTAKEEQKSSLDTQKKIFTRMCEENNWEIYDIYEEVE------SGTRTNRKG 82 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 ++ ++ + G +L + L RL+R V A + +++ H + + TL I Sbjct: 83 LNQLINDAKEGK---FNLILAKELSRLARN-VPLAYQLREILNKHKVHLKTL----DGAI 134 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 D+LN L A +ES+ S+R+K +++ + ++ G + P L Sbjct: 135 DTLNGDLDKF--GLYAWIYEQESQKTSNRLKQTFRARAKE----GEFNGSEPPYGYYL-K 187 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNF---SGKES---AWGPSV 236 + +V D + ++ IF + ++ + +AIA+ L + ++ GK + W S Sbjct: 188 DKKLYVRDDYTPEVVKRIFNMYLQGKGFDAIARQLYNESIPTPAQLKGKSNASDKWHGST 247 Query: 237 IEKLLANKALIGICVPSYRAR-----------GKGISEIAGYYPRVISDDLFYAVQEIRL 285 I+ +L N G V + I + +IS ++F VQE+ + Sbjct: 248 IKVILTNPHYTGTLVQCRDTKPSVTDKRQPLPESEYVIIENAHEPLISIEMFNTVQELII 307 Query: 286 APFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHR---CDRP 342 + I + ++L + C CG M YVC H C Sbjct: 308 SRSRI----RPQAEVHLFTNTIFCADCGRGMHFKKNRKG----YVCGNFNKHGSKACSDH 359 Query: 343 SIKRDLVDYNIINELLFNCSKIQ--------------PVENKKDANETLELKIIELQMKI 388 IK ++ I+N++ ++ +N + +E I +L+ + Sbjct: 360 FIKERELEEIILNDIKSIEQQMDLDGLIDRVIKQLESDTKNNTNRLSQVEQNIEKLKKQK 419 Query: 389 NNLIVALSV-APEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGR 447 L L+ + ++ I ++K++ L+ S + + + Sbjct: 420 VQLTSLLADNSIDIEEYRLTIEEINKKINDLMSDKLKLEKSKDQSKRERKNMKKLKNELK 479 Query: 448 E------LCRTLAYKTFEKIIINTDNKTCDIYFMNGIVF 480 E L + ++ ++I I D IY+ F Sbjct: 480 EYIHFNKLTPEMLHRLVDRIEIKEDGSP-KIYYRFANDF 517 >UniRef50_Q72WY0 DNA recombinase, putative n=7 Tax=Bacillus cereus group RepID=Q72WY0_BACC1 Length = 522 Score = 299 bits (765), Expect = 2e-79, Method: Composition-based stats. Identities = 87/512 (16%), Positives = 170/512 (33%), Gaps = 65/512 (12%) Query: 2 KKAIAYMRFSSPGQM-SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 +K Y+R S+ Q G SL Q + ++ Y Y D G + GK Sbjct: 6 RKVAIYIRVSTEEQANEGFSLGAQEDYLKQYANTKG--YEVYDIYIDDG---YSGKDYNR 60 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 + +LV+S+DR+SR ++ + + DN + Sbjct: 61 PEIQRLFKDLYQEKFTG---ILVKSVDRISRRVSDVTKLIDDVLAPRKC-YVLVSDNNLD 116 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 + + L+A A E + RVK K+ + +G + Sbjct: 117 SSTT----GGTAFIQLLATFAEYERSMIVQRVKAGMSKRAELGYWNGGHVLG-------Y 165 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 D K + + + + IF LR E + +IA LN K G+ + I+ + Sbjct: 166 DVKNKELKVNKEEAEVVRKIFHLRTEGKGYKSIALILNQQGFKTKRGR--LFSIGTIKTI 223 Query: 241 LANKALIGICVPSY---------RARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGIS 291 L N IG C + + + G + ++S+DL+ VQ + A Sbjct: 224 LENPLYIGYCRWGRHKNWNVERRKGKTDEYKFVKGKHEPIVSEDLWKRVQGVNYAHKKSI 283 Query: 292 NSSKNPMLINLLRTVMKCEACGNTMIVHAVSGS----LHGYYVCPMRRLHR---CDRPSI 344 + ++N +L +++C +CG M++ H YY+C C I Sbjct: 284 SKNRNFNGEFVLSGILRCPSCGAGMVMCKTKKRDKSGYHLYYMCQAFHSKGKLACKSNLI 343 Query: 345 KRDLVDYNIIN--------ELLFNCSKIQPVENKKDANETLELKIIELQMKINNL----- 391 +++ ++ ++ L+ + + + E K+ E ++ ++ + ++ Sbjct: 344 RKEDIEEKVLQCINQIILIPLIVDKTFERIQEKKERGIERIKNDLLYINEELKRKKQFIK 403 Query: 392 ---IVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAI--------- 439 V E L +E+ L K + Sbjct: 404 KLNKDYFDEKIRVETYTELSEPLREEIDELESEKGKLDRKIESVEIPITKEMVIKTLENF 463 Query: 440 -DLTSKNGRELCRTLAYKTFEKIIINTDNKTC 470 +L E ++L +KI + + K Sbjct: 464 TNLYENATYEQKKSLLRAIIKKIEVQPNRKEI 495 >UniRef50_C8VVS5 Resolvase domain protein n=19 Tax=Firmicutes RepID=C8VVS5_DESAS Length = 552 Score = 299 bits (765), Expect = 2e-79, Method: Composition-based stats. Identities = 108/532 (20%), Positives = 195/532 (36%), Gaps = 71/532 (13%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 + AY R S+ + S Q E +K N ++ L Y D G SA K + Sbjct: 32 RVAAYCRVSTTLEQQETSYEAQVSYYTEKIKSNPNWKL-AGIYADDGKSATNTK--KRED 88 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F+ ++ G I ++ +S+ R +R V + + I V + + Sbjct: 89 FNAMIEDCMAGKI---DMVITKSVSRFARNTVDSLQNI-RKLKEKNIAVFFEKEG----V 140 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 ++L L+ IL +Q A EES S + ++ E+G + D Sbjct: 141 NTLEGTGELLITILSSQ-AQEESRNLSENTRWGLVRR----FENGVVSVNHNKFLGYTKD 195 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 K V P+ + + IF+L +E S IAK L V +GK S W +VI+K+L Sbjct: 196 KNGELVIVPEEAELVRRIFRLYLEGSSSIQIAKILESEGVLTVTGK-SKWCSTVIDKMLL 254 Query: 243 NKALIGICVP----------SYRARGKGISE---IAGYYPRVISDDLFYAVQEIRLAP-- 287 N+ +G + R + KGI I + +I +L+Y VQE + Sbjct: 255 NEKYMGDVLQQKTYTIDFLTKKRVKNKGIVPQYYIEDDHEAIIPKELYYQVQEEKARRAS 314 Query: 288 ------FGISNSSKNPMLIN----LLRTVMKCEACGNTMIVH--AVSGSLHGYYVCPMRR 335 + + L +M C CG + G + + C R Sbjct: 315 LCKQAMSRKAKRDEKEKSRYSSKFALSDIMVCRECGQPYRRQVWSKYGQKNAVWRCENRL 374 Query: 336 LHR---CD-RPSIKRDLVDYNIINEL--------------LFNCSKIQPVENKKDANETL 377 + C P+ K ++ I+ + N ++ + K+ + Sbjct: 375 KNGTKNCKHSPTYKEVMLYEAIMAAINSVVENRGEFVGAFRENVIRVIGSYSTKNLSTEY 434 Query: 378 ELKIIELQMKINNLIVALSVAPEVTA--------IAEKIRLLDKELRRASVSLKTLKSKG 429 +++I +LQ ++ LI + VT I+E+I + ++ LK ++ Sbjct: 435 DMQIEKLQTEMLALIEENAKQGVVTEDFDERYKGISERINDMKQKKLDQVRELKMAENYQ 494 Query: 430 VNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFK 481 + T+ + R+ L + + + D+ +I F +GIV K Sbjct: 495 QRLNDMDACLKKTTCDVRDFDHDLVRRLLQSVKAIRDD-EIEIQFKSGIVMK 545 >UniRef50_A7VRL7 Putative uncharacterized protein n=9 Tax=Clostridiales RepID=A7VRL7_9CLOT Length = 550 Score = 299 bits (765), Expect = 2e-79, Method: Composition-based stats. Identities = 74/538 (13%), Positives = 169/538 (31%), Gaps = 81/538 (15%) Query: 4 AIAYMRFSSPG--QMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 Y R S +S+ Q+ +++++ N + + + + D G+S Sbjct: 12 TALYARLSQEDALDGDSNSIVNQKAVLSKYAADNG--FSNPVFFIDDGVSGVT---FDRP 66 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F+ + IE G + T++V+ + RL R+ + ++ + I + D Sbjct: 67 NFNRMIAEIEAGNVG---TVIVKDMSRLGRDYLKVGYYTEIFLVERDVRYIAINDGVDSA 123 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 + ++ + + A + S +V+ K+ + G +T P +D Sbjct: 124 KG--DNDFTPFRNLFNDFYA----KDTSKKVRA---IKKAQGMA-GEHLT-KPPYGYKVD 172 Query: 182 -DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGK------------ 228 + + ++ D + ++ IF L + + IAK L Sbjct: 173 PNDKKQWIVDEEAAAVVKRIFDLCVAGKGPMQIAKILKTEKTLTVKAYYAKRKDKPLPEN 232 Query: 229 ESAWGPSVIEKLLANKALIGICVPSYRARG--KGISEIA----------GYYPRVISDDL 276 W + + +L G V K I + ++ + + Sbjct: 233 PYHWNDNSVVGILERMDYCGHTVNFKSYSKSHKLKKRIPTTKEQQAIFRNTHEAIVEEAV 292 Query: 277 FYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVS--GSLHGYYVCPMR 334 F VQE+R + + + L ++ C CG+ + +Y C Sbjct: 293 FERVQELRANKRRPTKAERQG----LFSGLVYCADCGSKLHFATCKNFNGSQDHYRCENY 348 Query: 335 RLHR--CDRPSIKRDLVDYNIINELL--------------FNCSKIQPVENKKDANE--- 375 + + C I+ +++ ++ + K + E +K+ Sbjct: 349 KSNTGSCTAHFIREEVLKTIVLQRIFAVTALFYEDISAFMELIRKQRFDEAEKEMKRKRR 408 Query: 376 ---TLELKIIELQMKINNLI-VALSVAPEVTAIAEKIRLLDKELRRASVSLKTLK----- 426 +I EL + ++ + + E R + + + Sbjct: 409 EVGQARKRIAELDRIFKRIYEDDINGTISHERFLKLSAEYEAEQRELTEKVNAEQKEVDT 468 Query: 427 -SKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKHY 483 + + F F I EL T+ + +KII++ K F + ++ Sbjct: 469 YEQNKSDFDSFALIIRKYVGITELTPTIVNEFIKKIIVHAPEKVNGKRFQKVDIVFNF 526 >UniRef50_C7GC56 Site-specific recombinase, resolvase family n=7 Tax=Bacteria RepID=C7GC56_9FIRM Length = 522 Score = 299 bits (765), Expect = 3e-79, Method: Composition-based stats. Identities = 84/540 (15%), Positives = 164/540 (30%), Gaps = 90/540 (16%) Query: 3 KAIAYMRFSSPGQ------MSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGK 56 + Y R S + +S+ Q+ ++ ++ + + Y D + G Sbjct: 7 RVAIYCRLSEEDRNKQSETDDSNSIQNQKSMLLQYSLEHG--WEVYNIYSDDD---YTGS 61 Query: 57 HAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCD 116 + F+ L+ ++ +L ++ R +RE L GI I++ D Sbjct: 62 DRRRPEFNRLLEDAKNRK---FDIVLCKTQSRFTRELELVEKYIHGLFPIWGIRFISIVD 118 Query: 117 NTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPR 176 N + + E S +K +R+ +G + A Sbjct: 119 NADTA-----NKGNKKSRQINGLVNEWYLEDMSENIKSVLTDRRK----NGHHIGAFALY 169 Query: 177 WLSLDDK-RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNF---------- 225 D + + D + + + +F L + AIA+ LND + N Sbjct: 170 GYKKDPDVKGHLIIDEEAAEVVREVFTLFSQGYGKTAIARMLNDRGIPNPTEYKRLHGLR 229 Query: 226 -----SGKESAWGPSVIEKLLANKALIGICVPSYRAR------------GKGISEIAGYY 268 + + W I +L N+ IG V + G + Sbjct: 230 YKQPKTKNSTLWKYFAISDMLVNEIYIGNMVQGKYGSVSYKTKQNKPRPKDEWYRVEGTH 289 Query: 269 PRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGY 328 +I +L+ VQ + I L +C CG TM G Y Sbjct: 290 EPIIDRELWDRVQALVAQKAKPFTVG----TIGLFARKARCMNCGYTMRSSKNHGK--HY 343 Query: 329 YVCPMRRLHR--CDRPSIKRDLVDYNIINELLFNCSKIQPVENKKD----------ANET 376 C R + + C I D ++ +I+EL ++ + + E Sbjct: 344 LQCSNRHVAKDACIGSFISVDKLEKAVIDELNKLSAEYLDKDELEQNVQFNNDLRGQKEA 403 Query: 377 LELKIIELQMKI---------------NNLIVALSVAPEVTAIAEKIRLLDKELRRASVS 421 LE +I Q KI ++ L + + L+K + Sbjct: 404 LETEIAAYQKKIAEYTKGIRELYLDKVKGILSELDYLDLSKDFSTQKERLEKLMIDTQKQ 463 Query: 422 LKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINT-----DNKTCDIYFMN 476 L ++ K + + I+ + N L R K + +++ +I++ Sbjct: 464 LDVIERKMLIGDNRRQLIEQYT-NLEHLDRETVEKLIDYVLVGKKDPVTKEVPIEIHWNF 522 >UniRef50_UPI0001C3729E phage integrase family site specific recombinase n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C3729E Length = 516 Score = 298 bits (764), Expect = 3e-79, Method: Composition-based stats. Identities = 81/517 (15%), Positives = 166/517 (32%), Gaps = 56/517 (10%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 ++ AY R S+ + +SL Q+ ++ ++S++ + Y D G + K Sbjct: 18 RRVAAYCRVSTDNKDQLESLETQKAHYESYILLHSEWEYAGLYY-DTGRTGTKADI--RD 74 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 L A G + +LV+S+ R SR + + ++ +LN G+ + +N Sbjct: 75 GLQNLLTACRIGKVE---HILVKSISRFSRNT-TDCLSIVRELLNIGVTIYFEKENIDT- 129 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 E S + +++ A EES S K S +++ + +GT P D Sbjct: 130 ----GEMESELILSILSSMAEEESASISKNEKWSIQRR----MAAGTYKIGYVPYGYQRD 181 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 + +P + IF+ + S + IA L + G W S + ++ Sbjct: 182 ENGDML-IEPAEAGVVRFIFRTLLAGNSTDTIASALQQQGIPTRKG--GKWSGSTVRDII 238 Query: 242 ANKALIGICVPSYR------ARGKGISEIA-----GYYPRVISDDLFYAVQEIRLAPFGI 290 N+ +G + R E+ ++ +IS + F + Sbjct: 239 INEKYVGDALFQKTYTDDSFRRHNNHGEVKTYLVSEHHEPIISHEDFDKANSLIRQRGKE 298 Query: 291 S---NSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRL--HRCDRPSIK 345 + + C CG S +VC RC ++ Sbjct: 299 KGIVRENGKYQNRFPFSGKITCGICGGKYKRRIHSHGAEIAWVCNTHITDIKRCSAKYVR 358 Query: 346 RDLVDYNI---INELLFNCSKIQPVENKKDANETLELKIIELQMKIN----------NLI 392 D++ +N+L+F+ + +++ + I + L Sbjct: 359 DDVLKAAFITMLNKLIFSRKMLLRPLYDSLKSDSADESIQRMNELKLLLEKNLEKRYRLR 418 Query: 393 VAL-SVAPEVTAIAEKIRLLDKELRRASVSLKTL------KSKGVNSFSDFYAIDLTSKN 445 + + ++ L K L L ++ V T+ Sbjct: 419 QLRGQEIIDNVVFSREMNTLKKLSEEYRNELSILSCYTSAEALEVTEMEKLLRYTETTAV 478 Query: 446 GRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKH 482 E L + ++II+ + + G+ K Sbjct: 479 VEEFSDALFHTFVDRIIVYGRD-YIEFKLKCGLTLKE 514 >UniRef50_B0MRT0 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MRT0_9FIRM Length = 520 Score = 298 bits (764), Expect = 3e-79, Method: Composition-based stats. Identities = 84/468 (17%), Positives = 156/468 (33%), Gaps = 49/468 (10%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 +A AY R S+ SL QR +++ NSD + D G S Sbjct: 5 RAAAYCRVSTDRAEQSGSLASQRSFFDDYI-RNSDSMTLVGVFYDEGTSGTTT--LNRYG 61 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F++ + G I +L + + R +R V + + +++ G+ +I + DN I Sbjct: 62 FNKMISLAVSGGI---DIILTKEVSRFARNTV-DTLNITRMLRAKGVGIIFINDN----I 113 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 D+ + L +I+ A A EES S RVK ++K + + + + D Sbjct: 114 DTRDSDGELRLSIM-ATIAQEESRKISERVKWGQQRKMEQGV-----VFGRSCLGYDVKD 167 Query: 183 KRTAFVPDPDRVKTIELIFKLR-MERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 + + D + ++ IF + + +IA LN ++ +G W + I K+L Sbjct: 168 GK--ITVNADSAEIVKRIFTEYTVLLKGAESIADGLNAEQIRTVNG--GRWSGAFIRKVL 223 Query: 242 ANKALIGIC-----------VPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGI 290 N +G R I ++ +IS +L+ Q Sbjct: 224 RNVKYVGDLEQKKTCTPDFLTHKKRLNSSEHIYIRNHHEPIISRELWEQTQAEISRRKPT 283 Query: 291 SNSSKNPMLINLLRTVMKCEACGNTMIVHA---VSGSLHGYYVCPMRRLHR-CDRPSIKR 346 S + + + C CG+ M+ +G ++ C R + C+ ++ Sbjct: 284 DTSRHSDR--YVFSGKVYCGVCGSVMVSRVKTLKNGKIYHALRCSGRIGGKSCNNETLNV 341 Query: 347 DLVDYNIINELLFNCSKIQPVEN---------KKDANETLELKIIELQMKINNLIVA-LS 396 + + V N K L KI L K + L Sbjct: 342 TALKACVKRIFTDIPIDKTSVINAVIKGLSRTDKPDIPALRRKIETLNAKKRRAVDLMLD 401 Query: 397 VAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSK 444 + E+ D + + S + + +S A Sbjct: 402 GLITQQELIEQKSYYDSIIEKLSQEISSDRSVLETDKIRTNAERFLDF 449 >UniRef50_B0P5W1 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P5W1_9FIRM Length = 639 Score = 298 bits (764), Expect = 3e-79, Method: Composition-based stats. Identities = 94/505 (18%), Positives = 174/505 (34%), Gaps = 53/505 (10%) Query: 4 AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAF 63 A+ Y R+SS Q S+ +Q + E+ + NS ++ Y D +S GK + F Sbjct: 18 AVIYARYSSHNQRD-VSIEQQVKQCQEFAQQNSFQIIE--IYADRAIS---GKTDKRPNF 71 Query: 64 SEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNID 123 + E ++ +R+ R + + + + GI V+ ++ Sbjct: 72 QRMMRDAEKKKFK---YVIAWKSNRMGRNMLQAMMN-EAKLNDLGIRVLYAEEDFD---- 123 Query: 124 SLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDK 183 + + SE + +K I P D Sbjct: 124 --DTAAGRFALRSMMNVNQFYSENMAEDIKRGLYDNAAKC----KIANGGLPLGYKKGDD 177 Query: 184 RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLAN 243 + DP + + IF S IA LN +K GK AWG + LL N Sbjct: 178 -LRYALDPPNDEIVREIFSRTACGDSFADIAADLNARGIKTSRGK--AWGKNSFHALLTN 234 Query: 244 KALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLL 303 + G+ + I G P+++ LF+ VQE+ + LL Sbjct: 235 ERYTGVYIYG-------DIRIEGGVPQIVDKGLFFRVQEVLKTKKNPQGRHR-INGDYLL 286 Query: 304 RTVMKCEACGNTM---IVHAVSGSLHGYYVCPMRR-LHRCDRPSIKRDLVD--------- 350 + C C + M +G LH YY+C RR CD+ +I+RD ++ Sbjct: 287 TGKLFCGHCKSPMAGISGTGKNGKLHHYYICQKRRMEKSCDKANIRRDKIEHEVAVAIRN 346 Query: 351 ----YNIINELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTAIAE 406 +++ + + + +LE ++ E + NL+ A+ + + Sbjct: 347 YIMRDDVLEWIADSAMTFAKEYRNQTCIGSLETQLAENKQATKNLLTAIEHGIITSTTKD 406 Query: 407 KIRLLDKELRRASVSLKTLKSKGVN-SFSDFYAIDLTSKNGRELCRTLAYKTFEK----I 461 ++ L++E L ++ ++ S D + KNG + K F+ + Sbjct: 407 RLLELEREQAILVSRLDEEQASLLHYSRDDIISAMSLYKNGNIEDKAFQAKLFDTFLIAV 466 Query: 462 IINTDNKTCDIYFMNGIVFKHYPLM 486 + D+ + F + PL Sbjct: 467 YLYDDHLKIEFSVTGKKTFVNLPLD 491 >UniRef50_D1N7I8 Resolvase domain protein n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N7I8_9BACT Length = 432 Score = 298 bits (764), Expect = 3e-79, Method: Composition-based stats. Identities = 78/367 (21%), Positives = 141/367 (38%), Gaps = 38/367 (10%) Query: 2 KKAIAYMRFSSPGQMSG--DSLNRQRRLIAEWLKVN--SDYYLDTITYEDLGLSAFKGKH 57 K+ I Y R S + +SL+ QR+ +++ + + L Y+D G F G Sbjct: 6 KRCIVYTRKSHEEGLDQAFNSLDAQRQACESYIQSQQFNGWELMPKRYDDGG---FSGGT 62 Query: 58 AQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDN 117 + A E L IE G + +++ +DRLSR V A E HG+ +++ Sbjct: 63 LERPALKELLADIEAGNV---DVVVIYKIDRLSRSLVDFA-ELQSRFEKHGVSFVSVTQQ 118 Query: 118 TVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRW 177 + + + ++ A E EI + R++ R+ G + P Sbjct: 119 IDTSGST-----GRMMLNILMTFAQYEREIIADRIRDKMAATRKQ----GKFAGGTLPYG 169 Query: 178 LSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVI 237 + V D + ++ IF+ +E +S IA LN + ++ +G+E W S I Sbjct: 170 YKS--ENKKMVVRQDEAEVLKRIFQRYLEIQSPKQIAMELNSNGLRIRTGRE--WNTSHI 225 Query: 238 EKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNP 297 + L + A IG + G + +I + + VQ + K Sbjct: 226 YRQLNSYACIGKVEYKGQ-------IYDGEHEAIIPLETWNEVQRLLKINAATPKGGKTR 278 Query: 298 MLIN-LLRTVMKCEACGNTM---IVHAVSGSLHGYYVC---PMRRLHRCDRPSIKRDLVD 350 +N L+ +++C CG M G + YY+C R C I ++ Sbjct: 279 ESVNAPLKGILRCGHCGCAMMPHYARKSDGRKYYYYICQKDSKRGKADCPVHRIPGSDIE 338 Query: 351 YNIINEL 357 +++EL Sbjct: 339 NLVMDEL 345 >UniRef50_C8VVS3 Resolvase domain protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VVS3_DESAS Length = 543 Score = 297 bits (762), Expect = 5e-79, Method: Composition-based stats. Identities = 95/531 (17%), Positives = 185/531 (34%), Gaps = 60/531 (11%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 K+ AY R S+ + +S + Q +++ + D+ Y D S K + Sbjct: 23 KRVCAYCRVSTDSREQHNSFSVQLEYYKSFIENHEDWQF-AGIYADEARSGT--KLQKRD 79 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F + E G + ++ +S+ R +R V ++I+ ++ + G+ V +N Sbjct: 80 DFLRMMKDCEDGKV---DMIITKSVTRFARNTV-DSIQAIRRLKELGVAVFFEKEN---- 131 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 I+SL+E + IL + A E+E S+ K + K+ QD GT + + + D Sbjct: 132 INSLSEKSEQMLTIL-SSLAQGEAESVSTNNKWAAIKRFQD----GTFILGTPAYGYTKD 186 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 + V + + IF + + AIAK L++ + E W VI+++L Sbjct: 187 -ENGELVIQEEAAAVVRRIFHEYLNGKGTYAIAKDLSEEGLPTIRSAE-KWNDGVIKEML 244 Query: 242 ANKALIGICVPSY----------RARGKGISE---IAGYYPRVISDDLFYAVQEIRLAPF 288 N G + R R KG I + +IS D V+EI Sbjct: 245 LNPIYTGKLLHQKTMTTEVLPFRRQRNKGQLPQYLIEDNHAAIISQDQAEEVKEIFEYRR 304 Query: 289 GISNSSK--NPMLINLLRTVMKCEACGNTMIVHA---VSGSLHGYYVCPMR--RLHRCDR 341 + + C CG+ + C +C + Sbjct: 305 KQMGVDDLEKYQSRYAFSSKILCGECGSLFRRQKIYIGKPYEKIQWCCRQHIFDSTKCGQ 364 Query: 342 PSIKRDLVDYN--------------IINELLFNCSKIQPVENKKDANETLELKIIELQMK 387 +++ D V + I+ LL K++ E ++ +I+EL + Sbjct: 365 KAVREDDVQWAFTTIWNKLVSNYTEILTPLLEVLKKLRIDEQQEQEIGECGNRIMELTEQ 424 Query: 388 INNLIVALSVA-PEVTAIAEKIRLLDKELRRASVSLKTLK-----SKGVNSFSDFYAIDL 441 + L +S + E+ L EL A L + ++ + Sbjct: 425 GHILSRLVSKGYIDHAVFIERQNALTIELAAAKKKRSQLLDNNGFDREIDGTEQLIELIR 484 Query: 442 TSKNGRELCRT-LAYKTFEKIIINTDNKTCDIYFMNGIVFKHYPLMKVISA 491 + + E R L + +K+I+ + + + +N + + Sbjct: 485 NNPHVIEEYREDLFLQAIDKVIVQKNGQ-ITFWLINRLELSESIRKEAAED 534 >UniRef50_C6GWI2 Site-specific recombinase n=1 Tax=Streptococcus suis BM407 RepID=C6GWI2_STRS4 Length = 482 Score = 297 bits (762), Expect = 5e-79, Method: Composition-based stats. Identities = 81/501 (16%), Positives = 162/501 (32%), Gaps = 62/501 (12%) Query: 1 MKKAIAYMRFSSPGQ--MSGDSLNRQRRLIAEWLKVNSDYY-LDTITYEDLGLSAFKGKH 57 M K Y+R S +S+ QR L+ ++L +++ I + D G F GK+ Sbjct: 1 MPKIALYLRLSVDEATADESNSITNQRILLNQYLDRTPEFHPFKRIEFIDDG---FSGKN 57 Query: 58 AQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDN 117 AF+ + + G I ++V+ R R+ + + G+ I + D Sbjct: 58 PNRPAFNRLMSDVRVGKIR---YIIVKDFSRFMRDYLEFGNYIENIFPFLGVRFIAVNDQ 114 Query: 118 TVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRW 177 + I + + S +VK + ++ SG M+ P Sbjct: 115 FDSF--TSENNGVEIDVPFRNLLNDFYARDVSEKVKSAMNTMKR----SGKNMSWLPPFG 168 Query: 178 LSLD-DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNF----------- 225 D + R + D ++ IF+L +E L+ IA LND Sbjct: 169 YLKDPNDRFKIIIDESVAPVVKRIFQLCIEGVGLSRIAIILNDENTITPAERKRQISQAD 228 Query: 226 ---------SGKESAWGPSVIEKLLANKALIGICVPS---------YRARGKGISEIAGY 267 K + W S + ++L N+A G + + + + I Sbjct: 229 YQYQIVVTEKQKRNIWTRSTVSRILKNEAYKGTYLFNAKTIFNGKQVKRPKEEWERIENN 288 Query: 268 YPRVISDDLFYAVQEIRLAPF-GISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLH 326 + +++ ++F Q+ + S +L M CE CG+ + + H Sbjct: 289 HESIVTSEIFEQAQKALKSRNNRHSYQQSTKKYDVILTGFMICEHCGHKLTAYTYKKKTH 348 Query: 327 GYYVCPMRRLHRCDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLELKIIELQM 386 Y+ C ++ + D V+ I+ L + ++ K + + Sbjct: 349 HYFYCRYCKVQGISLKGCRSDRVEQKILEYLKSKKEDVPSQKSNKSLVYLMSQLKAQ--- 405 Query: 387 KINNLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNG 446 K + + +DK++ L L + Sbjct: 406 KFSYYQDYKDEKINRETYIYYKQEIDKKIDDIEEELNKLNNSQCMI-------------D 452 Query: 447 RELCRTLAYKTFEKIIINTDN 467 L + ++ ++II+N Sbjct: 453 SSLSKETLRESVKQIIVNHAG 473 >UniRef50_A8W2T2 Site-specific recombinase DNA invertase Pin-like protein protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8W2T2_9BACI Length = 546 Score = 297 bits (762), Expect = 5e-79, Method: Composition-based stats. Identities = 83/528 (15%), Positives = 179/528 (33%), Gaps = 70/528 (13%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 K+ Y R S+ +M +S Q +++ N D+ L Y D G++ + Sbjct: 29 KRIAVYARVSTASEMQSNSYEIQVAHYTDYVNKNPDWELV-QVYADEGITGTSTA--KRT 85 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHG--IDVITLCDNTV 119 AF++ ++ E+G ++ +S+ R +R + + I R++ + + + V + Sbjct: 86 AFNQMIEDCENGL---CDYIITKSISRFARNTL-DCISRIRHLKSLNPPVGVFFEKE--- 138 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 +D+L+ L IL + A EES S K +K+ Q + + Sbjct: 139 -QLDTLDSRSELFLTIL-SSMAQEESRNVSENTKWGVQKRFQQGI---VHFPTTYFLGYD 193 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEK 239 D + D ++ + IF ++ + IAK L ++ G W + + Sbjct: 194 KDKDGN-IIIDEEQAVVVRRIFDDYLKGKGTPQIAKDLERDGIETARG-NKHWTSNAVYD 251 Query: 240 LLANKALIG----------ICVPSYRARGKGISE---IAGYYPRVISDDLFYAVQEIRLA 286 +L + G + R R + + P +I D F VQ+ Sbjct: 252 ILRQEKYQGNTLTGKRVTVDYLTHKRVRNDNLETQYFVKNTNPPIIDSDTFERVQQEMKR 311 Query: 287 PF-----GISNSSKNPMLINLLRTVMKCEACGNTMIVH------AVSGSLHGYYVCPMRR 335 ++ + + C CG +L + C Sbjct: 312 RSMLRHDPERKYRQSYSNKSPFSNYLFCGKCGLPAHRRRLSTTVNKERTLFTAFHCRSSS 371 Query: 336 LHR-----CDRPSIKRDLVDY---NIINELLFN----CSKIQPVENKKDANETLELKIIE 383 R C + + ++ I+ +L N ++Q ++ + ++ E Sbjct: 372 GQREHEEYCGNQYVWEERMENSFIAILQDLKQNKAQVYEEVQEAIADVALSKDEQKRLDE 431 Query: 384 LQMKINNLIVALSVAPEVTA-------------IAEKIRLLDKELRRASVSLKTLKSKGV 430 L ++ + +S ++ + + +L++E + SL+ K Sbjct: 432 LNEQLGIVADRISELAGKSSGNQNSIYDATLRHLIYEQEILEQERDSYNESLQE-KEYLE 490 Query: 431 NSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGI 478 + + Y + K + + +K +I + D +F GI Sbjct: 491 SHLNRLYELLEEMKPEDPFDGDIFREVIDKGVIYP-KRVVDFHFKCGI 537 >UniRef50_D1C6M6 Resolvase domain protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6M6_SPHTD Length = 524 Score = 297 bits (761), Expect = 7e-79, Method: Composition-based stats. Identities = 96/529 (18%), Positives = 190/529 (35%), Gaps = 61/529 (11%) Query: 2 KKAIAYMRFSSPGQM-SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHA-Q 59 ++A Y R SS Q G SL+ Q ++ + Y Y + F G + Sbjct: 5 RRAAIYARVSSEQQERDGTSLDTQLAACRQYAAAHG--YEVVAEYRE----VFTGVNLWD 58 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 + +A+ ++ ++DRLSR+ V + L +HG V + + Sbjct: 59 RRELTALREAMRRKE---FDVVIAYAIDRLSRDPVHLGV-ILSEADHHGAAVEFVTEPLD 114 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCP-RWL 178 N P + + A E + + + R+ E+G ++ P Sbjct: 115 ------NSPEGQLIRFVRGYAAKVEH----EKFRERAMRGRRARAETGKLIHGPRPLYGY 164 Query: 179 SL-DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVI 237 D +T V +P+ ++ IF+ E R L AIA+ L D + +GK + W + + Sbjct: 165 QWADADKTRLVVNPETAPIVQRIFREAAEGRPLRAIARGLTDDGIPTPTGKPT-WSMTTV 223 Query: 238 EKLLANKALIGICV-PSYRARGKGI-------SEIAGYYPRVISDDLFYAVQEIRLAPFG 289 K+L + G ++++R + G P ++ F VQE Sbjct: 224 SKILKHPHYTGDARAWTWQSRNGYVRNHEAGLPLPEGTVPPLVDRATFELVQEQFARNQA 283 Query: 290 ISNSSKNPMLINLLR-TVMKCEACGNTMIVHAVSGSLHGYYVCPMR--RLHRCDRPSIKR 346 + + LLR ++C CG M VH SG Y C R R C P I Sbjct: 284 RAARNNRNPEAALLRGGYVRCGYCGRAMHVHKNSGKP--AYRCNGREYRRGSCPMPVIAA 341 Query: 347 DLVDYNIINELL----------FNCSKIQPVENKKDANETLELKIIELQMKINNLIVALS 396 ++D + + +++Q + ++ + ++ + NL A+ Sbjct: 342 HVLDAAVWERVEAILTRPEIVAEELARLQTDDPTAADLAAVDRLLQQVDRQRANLTQAIG 401 Query: 397 VAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYK 456 + + A+A + L+ + L+ + ++ + A + C +A + Sbjct: 402 LTDDPDAVAALMAELE-RVAARRRQLEAEREGILHRREAWEAARANLADLMSWCERVAER 460 Query: 457 TFE------KIIINTDNKTCDIYFMNGIVFKHY------PLMKVISAQQ 493 E ++ ++ + +Y + + Y PL +V+ + Sbjct: 461 LGELTYEQRRLALDALGISVQVYRASDPDYPRYVITAKLPLDEVVFPSR 509 >UniRef50_C7GD97 Site-specific recombinase, resolvase family n=3 Tax=Roseburia RepID=C7GD97_9FIRM Length = 526 Score = 297 bits (761), Expect = 7e-79, Method: Composition-based stats. Identities = 75/541 (13%), Positives = 184/541 (34%), Gaps = 82/541 (15%) Query: 2 KKAIAYMRFS----------SPGQMSGDSLNRQRRLIAEWLKVNSDYY-LDTITYEDLGL 50 +K Y+R S S Q +S++ QR+++ ++++ +++ + + D G Sbjct: 5 RKIAIYLRLSIEDDALDGKASTEQRESNSISNQRKMLLDYIRNDAELMGQEVAEFCDDG- 63 Query: 51 SAFKGKHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGID 110 F G + E L ++ I + +LV+ + R +R+ + ++ G+ Sbjct: 64 --FSGTNMDRPGLQEMLKQVKQSKI---SCILVKDMSRFARDYIELGDYLNQIFPFMGVR 118 Query: 111 VITLCDNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIM 170 I + D+ + + + + S+ S +VK S++ K +G + Sbjct: 119 FIAVNDHYDSREHEGS--TTPLDTAFQTLLYDLYSKDISVKVKTSFQNK----CANGEYV 172 Query: 171 TASCPRWLSLDD-KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFS--- 226 P + + ++ + + + + IF L + S IAK L + Sbjct: 173 FGQVPFGYAKSEIEKNTVIVNEKEAEIVRHIFSLAEKGMSSTQIAKELIAKQTPTVTQMR 232 Query: 227 -------GKESAWGPSVIEKLLANKALIGICVPSYRAR------------GKGISEIAGY 267 + W + + ++L N+ +G R + I + Sbjct: 233 HPERKMEREHHTWSNTAVRRILNNRFYLGEMAYGKSVRKSVGSKNGIAVPKEEWKVITDH 292 Query: 268 YPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGN--TMIVHAVSGSL 325 + +++ ++F + + S+K + L + C CG +G + Sbjct: 293 HEPLVTPEVF-----ALASAYRPEQSTKRKREKHPLTGKIYCGGCGYAINYKPQRNNGKM 347 Query: 326 HGYYVCPMRRL---HRCDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLEL-KI 381 ++ C L C + D+++ ++ EL + + ++++ E + ++ Sbjct: 348 PNHFWCRKHSLLQIPDCCT-YFRADILEEIVLTELYRELMRRGDLIKQRESLEQFQKVEL 406 Query: 382 IELQMKINNLIVAL----------------------SVAPEVTAIAEKIRLLDKELRRAS 419 L ++ N + IA ++ L ++ A Sbjct: 407 SRLNKELGNYRMQYRSLQTEKDTLYENYAVKQIEAGEYCSRADGIALQMEELSCKIEEAE 466 Query: 420 VSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNK-TCDIYFMNGI 478 ++ + D I S+ + L + +K+II D + + + G Sbjct: 467 LAFGRFTEEYNRPKQDIKEIIRFSQMEK-LTQEAVDVFIKKVIIYRDKRVEIEWNYAFGE 525 Query: 479 V 479 Sbjct: 526 E 526 >UniRef50_UPI0001C361A0 site-specific recombinase n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C361A0 Length = 564 Score = 297 bits (760), Expect = 8e-79, Method: Composition-based stats. Identities = 80/539 (14%), Positives = 179/539 (33%), Gaps = 77/539 (14%) Query: 3 KAIAYMRFSSPG--QMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 + +Y+R S Q+ DS+ QR ++ + + + + L +D + G + + Sbjct: 10 RTYSYLRLSVEDGDQIESDSIKNQRVIVNRYKENHPEIQLVGEEIDD----GYSGTNFKR 65 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 F L+ I+ G I ++V+ L RL R+ + GI + + DN Sbjct: 66 PGFQNLLELIKKGMI---DCIIVKDLSRLGRDFTEVLRYVQRRFPEWGIRFVAIDDNYDS 122 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 + +S + + + + + S ++ + K R+ G + A Sbjct: 123 DDESCKQDF--LTLPIKSLLNESYPANTSISIRNTLKAMREQ----GLFVGAYAYYGYQK 176 Query: 181 D-DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKE---------- 229 D + R + DP + IF ++ S +AIA+ L+ + + Sbjct: 177 DPEDRHRLILDPIASGVVRDIFAWKICGLSQDAIARRLDSLGFLPPADYKVSQGIPYKTT 236 Query: 230 ------SAWGPSVIEKLLANKALIGICVPSYR------------ARGKGISEIAGYYPRV 271 S W + ++L N A +GI V + + G P + Sbjct: 237 FKLYERSHWTAVAVGRILCNIAYVGILVQGKTTTPNFKVHKTIYKTEEEWDIVEGAIPPI 296 Query: 272 ISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVH--AVSGSLHGYY 329 +S F V + + + L +++C C +++ +G +GYY Sbjct: 297 VSWIDFMIVNHLLEKDTRTAPGQDT---VYLFSGILECADCHQSLVRKPAKYNGKEYGYY 353 Query: 330 VCPMRRLHR--CDR-PSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLELKIIELQM 386 VC R H+ C + + +++ + S + +++ ET+ +++ Sbjct: 354 VCSTNRDHKEQCSSPHRVSEAKLKKSMLLLIRHQISMMVNLKSILQYVETIPFSDRKVEK 413 Query: 387 KINN-----------------LIVALSVAP-EVTAIAEKIRLLDKELRRASVSLKTLKSK 428 + N L + + + + ++ + + Sbjct: 414 ESNRMEMLKKEYQWNLKLSTSLYESFQEGILTKEEYLQMKKKYSERCGELEQLMENQEEE 473 Query: 429 GVNSFSDFYAIDLTSK------NGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFK 481 N F + + + +EL R L + I + ++ F ++ Sbjct: 474 SRNIFRNICGQNNWIEHFLKFGQIKELDRKLVVSFIKDIQVTAQG-NLEVTFWFEDEYR 531 >UniRef50_A6LK15 Resolvase, N-terminal domain n=1 Tax=Thermosipho melanesiensis BI429 RepID=A6LK15_THEM4 Length = 494 Score = 297 bits (760), Expect = 9e-79, Method: Composition-based stats. Identities = 107/510 (20%), Positives = 194/510 (38%), Gaps = 69/510 (13%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 KA AY R+SS Q S+ Q I E+ K N+ + TY D SA Sbjct: 10 KAAAYARYSSNNQSEL-SIEAQLSEIKEYAKNNN--IVIVETYVDKAKSAKSA---DRPE 63 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F + + +LV LDR SR + +++ L+ N + +I++ + Sbjct: 64 FQRMISDAKKHK---FDVILVHKLDRFSRNRY-DSLTYSHLLENSNVKLISITEQF---- 115 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS--- 179 ++P + +I + VK K + A G + P Sbjct: 116 --SDDPAGELVKSIIESVNEWYINNLRNEVK----TKTKYAAMKGYFLGGMPPLGYDLKE 169 Query: 180 ----LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPS 235 R + + ++ IF+L E S IA+ LN K +G + S Sbjct: 170 VIDEYGKTRKRYAVNHAEAIIVKEIFRLYAEGLSFKKIAESLNQKGYKTKNG--GKFKAS 227 Query: 236 VIEKLLANKALIGICVPSYRARG-------KGISEIAGYYPRVISDDLFYAVQEIRLAPF 288 I ++L NK GI + + G + ++ G P +I DLF VQE Sbjct: 228 SISEILRNKKYGGIYIYNQSKHGTRIRSEHDDVIKVEGAVPTIIDRDLFDKVQEKLSKRR 287 Query: 289 GISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDR-PSIKRD 347 + LL + C ACG+ + SG + Y+C + + + SI + Sbjct: 288 R----NIQKKHHYLLLNIAYCGACGSRLTG---SGGKYPKYICQDWKNKKSTKLVSIGKT 340 Query: 348 LVDYNI---INELLFNCSKIQPVENKKDAN--------------ETLELKIIELQMKINN 390 ++ + I LL + KI + K+ N + L++K +L+ KINN Sbjct: 341 KLEKQVISYIKNLLLSIDKIDFSKLTKELNKTEAKREQLYEKQFKELQMKKSDLENKINN 400 Query: 391 LIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELC 450 L+ A+ + + ++ + L+ EL + + +K L +K +N +++ ++ + +L Sbjct: 401 LVRAIEKGILIEKLEKEAKDLEIELNKVNQEIKNLHNKTINKYTEEQVREIYIEFMEQLN 460 Query: 451 -------RTLAYKTFEKIIINTDNKTCDIY 473 + + EK+I+ +I Sbjct: 461 SDNLLVIEKVIKRLIEKVIVYP-GGYVEIK 489 >UniRef50_B8I7G9 Resolvase domain protein n=2 Tax=Clostridium RepID=B8I7G9_CLOCE Length = 526 Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats. Identities = 93/522 (17%), Positives = 170/522 (32%), Gaps = 60/522 (11%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 + AY R SS + S N Q ++ N + Y D G+S ++ Sbjct: 23 RVCAYCRVSSDSKEQLQSFNAQVEHYTAMIRKN-LQWKFCGVYADEGISGTS--RSKRDE 79 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F + E G + ++ +S+ R +R ++IE ++ + + GI + +N + Sbjct: 80 FKRLIKDCESGKV---DIVITKSISRWARNTA-DSIEVIRKLKSLGIGIYFEKEN----V 131 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 ++L+ L+ IL + A EES S + S +K+ Q +G + + P +D Sbjct: 132 NTLSAESELVLTIL-SSIAQEESISISKNNRWSCQKRFQ----NGEWVPSYLPYGYDMDA 186 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 + + + + IF + + IAK L + + G S W + +L Sbjct: 187 -KGNIIIKEPEAQVVRRIFNDFLSGKGAYTIAKGLTEDGIATKRG-NSCWSEGTVRDILQ 244 Query: 243 NKALIGICVPSY----------RARGKGISE---IAGYYPRVISDDLFYAVQEIRLAPFG 289 N+ G + R R KG + I + VIS + V +I Sbjct: 245 NEKYAGDLLMQKTFTTDTIPFLRKRNKGQKQKYFIEDNHEPVISREQEEKVNKIIQYRKA 304 Query: 290 ISNSSKNPM--LINLLRTVMKCEACGNTMIVHA---VSGSLHGYYVCPMRRL--HRCDRP 342 SS + C CG I H + C +C Sbjct: 305 QQKSSDTAKYNNRYPFSGRIICGECGQAFIRRTIFKNKPYQHIQWSCGRHIRDITQCCMK 364 Query: 343 SIKRDLVD--------------YNIINELLFNCSKIQPVENKKDANETLELKIIELQMKI 388 +IK + V I+ LL KI + + +I EL + Sbjct: 365 AIKEEEVKLAYIQLFNKLKCNTNKILVPLLEGLKKISAEDYAGEEVTECNNRIYELNEQN 424 Query: 389 NNLIVALSVA-PEVTAIAEKIRLLDKELRRASVSLKTLKS------KGVNSFSDFYAIDL 441 L S + K +++ EL + + + + Sbjct: 425 QVLNRLRSKGYIDSALFILKSNVIETELEELKSKRNRILDNTNVSFEIEQTKQLINIVKA 484 Query: 442 TSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKHY 483 E + KT + I + + + +NG+ Y Sbjct: 485 HEGLIEEYDENMFEKTVKVITVKSQTQLV-FTLINGLELMEY 525 >UniRef50_UPI0001BCECF1 putative integrase n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCECF1 Length = 532 Score = 295 bits (757), Expect = 2e-78, Method: Composition-based stats. Identities = 95/540 (17%), Positives = 187/540 (34%), Gaps = 72/540 (13%) Query: 4 AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAF 63 A Y R S+ Q ++ Q ++ +N Y+D G++ + A Sbjct: 10 AAVYCRVSTDDQAERGTIESQIEYANKYCDLNGIRI--VKIYKDDGITG-TLPIEERPAG 66 Query: 64 SEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNID 123 +E L + G +TLLV LDRL R I + + +G+ + ++ + + Sbjct: 67 TELLSDAKEGL---FSTLLVFKLDRLGR-VTRIIINAIYELEQYGVKLKSMTEPFDTS-- 120 Query: 124 SLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDK 183 +P ++A A+ E R++L + +G + P ++ Sbjct: 121 ---DPSGRFLLTILAGVADLERSNILQRMQLGTNRAA----AAGKWLGGIVPYGYIVNGD 173 Query: 184 RTAFVPDPD--------RVKTIELIFKLRM-ERRSLNAIAKYLNDHAVKN------FSGK 228 R + I LIF L E+ S A+A LN + GK Sbjct: 174 R-FLEVNETEIPGTGMSEADVIRLIFHLIAEEKMSSIAVAHRLNSLGIPPSYVLRGIKGK 232 Query: 229 -----ESAWGPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEI 283 W + + N G+ R+ G I P ++S +++ QE+ Sbjct: 233 RHNHTRGIWFTGRVLCIAKNTTYYGVHRYGKRS-PHGRELIEREVPAIVSKEIWDEAQEV 291 Query: 284 RLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRR------LH 337 + +N LLR ++KC ACG+T + G+ YY C +R Sbjct: 292 M--HNNQLTAMRNAKTKYLLRGLIKCAACGSTYVGVNDKGT--RYYTCNGKRMYKKLGRE 347 Query: 338 RCDRPSIKRDLVDYNIINELLFNCSKIQ-----------PVENKKDANETLELKIIELQM 386 +C ++ D V+ + + + + LE+++ E + Sbjct: 348 KCTALAVNMDWVESEVWEDCMQYINNPNMVVEAIAANRGKATESAKQIHLLEMQLAECEN 407 Query: 387 KINNLIVAL-SVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKN 445 + ++ + + +++R + + L LKS+G S + + Sbjct: 408 ERERVMDVYRAKLITFEEVEKQLRKVADKKSTVQFELSALKSRGEASA---------TFD 458 Query: 446 GRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKHYPLMKVISAQQAISALKYMVDGE 505 +E + + +K+ D+ T + I + IS + ++ + V GE Sbjct: 459 QQETTLEILNEIKKKLT---DSSTVSLDLKFEIFHTLIKKITAISTEDGLTLKVHYVFGE 515 >UniRef50_C4ZAA9 Cassette chromosome recombinase B n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZAA9_EUBR3 Length = 576 Score = 295 bits (757), Expect = 2e-78, Method: Composition-based stats. Identities = 81/539 (15%), Positives = 176/539 (32%), Gaps = 83/539 (15%) Query: 4 AIAYMRFSSPGQ---MSGDSLNRQRRLIAEWLKVNSDY-YLDTITYEDLGLSAFKGKHAQ 59 Y+R S + +S+ QR I ++ N + + + + D G + GK+ Sbjct: 50 IAIYLRLSKEDEFVKDESNSITNQRAFIRGFINKNKELRKMSVMEFVDDG---YSGKNMD 106 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 LD ++ I + ++V+ R SR+ + + ++ G+ I + DN Sbjct: 107 RPDMQRMLDLVKRKQI---SCVIVKDFSRFSRDHIEQGKYIEQIFPFMGVRFIAINDNYD 163 Query: 120 YN--IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRW 177 + + E K I+ + E+ SS+V L+ KR +G + P Sbjct: 164 SADYVGGIGEIDVAFKGIMYDFFSEEQ----SSKVSLTLDTKRG----NGKYIATYAPYG 215 Query: 178 L-SLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNF----------- 225 + + V D + ++ IFK + +S+ I++ LN + Sbjct: 216 YVKSPEDKHKLVVDEFASQIVKRIFKEFLSGKSMYKISEGLNRDGIDTPGVYIAMQTESE 275 Query: 226 ------SGKESAWGPSVIEKLLANKALIGICVPSYRAR------------GKGISEIAGY 267 K+ W I ++L N+ G + S + Sbjct: 276 KQLARYREKKPLWNNVAIGRILENEQYTGTMIYSRFKIENVGDKHAKALPKDEWKRVENC 335 Query: 268 YPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHG 327 + +IS + F +R S+K + L M C CG+ + Sbjct: 336 HEAIISKEDFEKAAAMRKGN--TCASAKRKHETHCLTGKMICGNCGHRLSHTYAGRPK-- 391 Query: 328 YYVCPMR----RLHRCDRPSIKRDLVDYNIINELLFNCSKIQPV--------ENKKDANE 375 Y C +C S+ ++ + L + E + + + Sbjct: 392 -YYCANHYLDKTDGKC-NISVLDAYMESVVKKALQMMIDVLVDSRKVVDMQREKQAERLK 449 Query: 376 TLELKIIELQMKIN----NLIVALSVAP----EVTAIAEKIRLLDKELRRASVSLKTLKS 427 E + +++ NL A + E+ ++ ++ L R +++ ++ Sbjct: 450 QAEKHLSDMEHSRELIEKNLREAYESYKLGMTDKETYLEQRKIYEQMLERLRENIEKQRA 509 Query: 428 KGVNSFS----DFYAIDLTSKNGRE--LCRTLAYKTFEKIIINTDNKTCDIYFMNGIVF 480 + +++ + L R + E+I++ + +I + F Sbjct: 510 AVTKMADVDVPEVAGLEMLEGQLKLTGLNREMVDAFVEEIVVYAKD-RVEIKWKFKDEF 567 >UniRef50_A9W3Z8 Recombinase n=1 Tax=Methylobacterium extorquens PA1 RepID=A9W3Z8_METEP Length = 585 Score = 295 bits (757), Expect = 2e-78, Method: Composition-based stats. Identities = 121/440 (27%), Positives = 196/440 (44%), Gaps = 21/440 (4%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 M K +Y+RFS P QM GDSL RQ +W N +++T DLG+SA++G + Sbjct: 11 MPKCYSYIRFSRPEQMRGDSLRRQTEAAEKWAAENGMVIDESLT--DLGVSAYRGLNRLK 68 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 GA +FL+ + G + G+ L++ESLDR SRE + I +L G+ ++TL D VY Sbjct: 69 GALGKFLELVAGGQVPKGSYLIIESLDRFSREDALDVISEFSKVLRSGVTIVTLLDGQVY 128 Query: 121 NIDSLN-EPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 + + + EP +L ++++ RA+EES+ K RV +W+KKR+ A ++ ++TA P WL Sbjct: 129 SRERIKAEPMALFGSLMVMMRAHEESKTKGKRVGEAWEKKRKSASDA--VLTARVPGWLQ 186 Query: 180 L--DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVI 237 + D R P + + IF + +A+ L + + F W S + Sbjct: 187 VVEDGGRRRIEFKPHGREVVRRIFADTVNGYGKLKVAQRLKEAGFETFE-DGKTWHGSYV 245 Query: 238 EKLLANKALIGICVPSYR----ARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNS 293 +K+L N+A G P R R + GYYP +S+ F Sbjct: 246 QKVLRNRATFGEMQPYKRDEEGRRVPAGPPVKGYYPAAVSEADFMRASAALALRDKSGGP 305 Query: 294 SKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDR-PSIKRDLVDYN 352 + NLLR + +C CG M G + VC C + DL + Sbjct: 306 REATGEANLLRNLARC-TCGGRMRRENKGGKSSAWLVCAEASRGDCTNTRRWRLDLAEEK 364 Query: 353 IIN-ELLFNCSKIQPVENKK----DANETLELKIIELQMKINNLIVALSVAPEVTAIAEK 407 ++ + K+ E +K E K E+ ++ ++ + + VTA A + Sbjct: 365 LLGCSARIDFRKLLAAEGEKMDAPPTVADYEAKAAEVSKRLAAIMAVVEMG--VTAYAHR 422 Query: 408 IRLLDKELRRASVSLKTLKS 427 L KE A L ++ Sbjct: 423 AVELQKESDEAEAELARVRR 442 >UniRef50_Q11G64 Recombinase n=2 Tax=Rhizobiales RepID=Q11G64_MESSB Length = 541 Score = 295 bits (757), Expect = 2e-78, Method: Composition-based stats. Identities = 74/523 (14%), Positives = 145/523 (27%), Gaps = 82/523 (15%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 MK+ Y RFS+ Q S+ Q L N Y+D S Sbjct: 1 MKRTAIYARFSTELQQDR-SIEDQIELCRSHADRNGLS--VVAVYDDRARSGASV--YGR 55 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 L+A +LVE+ DRLSR++ + K + GI++ + + Sbjct: 56 DGLIHLLEAARDRK---FDVILVEAFDRLSRDQ-EDLAGIWKRLSFLGIELQAVHEG--- 108 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 I+ + + + +V+ Q + G Sbjct: 109 -------TADHIQIGVRGLLGSLYLTDLAHKVRRGM----QGVVRDGRHAGGRA-YGYRP 156 Query: 181 DDKR-TAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVI-- 237 + + + IF + ++ IA LN + G + W S I Sbjct: 157 VPGKPGELEIVEGEAEIVRRIFSEYVGGKTPRGIAFDLNAEGISPPRG--TRWSASTING 214 Query: 238 -----EKLLANKALIGICVPSYRARGKG---------------ISEIAGYYPRVISDDLF 277 ++ N+ G V + K + ++S++LF Sbjct: 215 NKTRHHGIILNELYAGKVVWNRIRMLKDPDTGRRISRPNPPEEWKRAEAPHLAIVSEELF 274 Query: 278 YAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLH 337 A Q + A + + LL ++KC CG + V + R Sbjct: 275 AAAQTRKEARSHTAP-ERQRKGKYLLSGLLKCSCCGGGLSVKDRDHGRVRVHCTTRRESG 333 Query: 338 RCDRPSIKR-DLVDYNIINELLFNCSKIQPVENKKDANET---------------LELKI 381 C I D +D ++ L + ++ + LE ++ Sbjct: 334 SCTNHKIFYLDEIDKAVLAGLQQHLKAPHLIKEFARTYQQERERLASEKRTRCSKLESQL 393 Query: 382 IELQMKINNLI-VALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAID 440 + Q I+ L + + K++ L + L ++ A Sbjct: 394 AKAQRAIDRLWSDYEAERIPMDIAGPKLKELHAQKTELEAELAETPAEQQKVIGLHPAAL 453 Query: 441 LTSKNGRELCRTL---------------AYKTFEKIIINTDNK 468 + + L ++ + ++ Sbjct: 454 QQYEQHVAELQALFGEGVSSDYAEAADKIRNLIARVTVIPQDR 496 >UniRef50_C9L5M4 Site-specific recombinase, resolvase family n=2 Tax=Clostridiales RepID=C9L5M4_RUMHA Length = 515 Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats. Identities = 84/534 (15%), Positives = 169/534 (31%), Gaps = 79/534 (14%) Query: 1 MK---KAIAYMRFSSPGQ---MSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFK 54 MK K Y+R S +S++ QR L+ +++ N + Y + + + D G S Sbjct: 1 MKNRLKIAMYLRLSKEDDWNAQESNSISYQRLLLRGYIERNFENY-EILEFVDDGYSGTS 59 Query: 55 GKHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITL 114 A E L A + ++V+ R +R+ V ++ GI I++ Sbjct: 60 ---MDRPAMQELLAAARQKKV---DCIIVKDFSRFARDYVETGFYVEQIFPFLGIRFISV 113 Query: 115 CDNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASC 174 D+ + + + S+ S +V S K++ G + +C Sbjct: 114 NDHYDSEAVTKKTIG--MNLAFKTLVNDLYSKDLSVKVTSSLHSKKER----GIYCSGNC 167 Query: 175 PRWLSLD-DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKN--------- 224 P + R + + IF+L +E + IAK + VK Sbjct: 168 PFGYRKKAEDRNQVEIVEEEAAVVREIFRLTLEGYTSVDIAKKFHKEKVKTPVEYLIERG 227 Query: 225 -----FSGKESAWGPSVIEKLLANKALIGICVPSYRARGK-----------GISEIAGYY 268 GKE +W + I +L N G V + K ++ Sbjct: 228 ATHRKPVGKEFSWQHTTICTILKNHFYAGDMVYGKYKKDKVGGKNHLKPRSEWKITYNHH 287 Query: 269 PRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGY 328 +I ++F AVQ+ + P ++L + C CG + Y Sbjct: 288 EPIIEREVFDAVQQ-----TRGISKPYQPQKAHILIGKVVCGECGKALRYRKAKN---PY 339 Query: 329 YVCPMRRLHR---CDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLELKIIELQ 385 + C R C + ++ ++ L + +E + ++ + ++ Sbjct: 340 FYCNERYTTGDENCVS-QVNVFFLEQVLLAALQKEIRRQMELEEVWSQYQEVQKEKYHVK 398 Query: 386 M-KINNLIVALSV-APEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTS 443 K+ AL E + E+ + + + L+ K S+ ++ Sbjct: 399 RDKLQKSQQALDAVGKEQITLYERYGKREIQREEYIEFREELQKKEDFIKSEIQEQEMRL 458 Query: 444 KN--------------------GRELCRTLAYKTFEKIIINTDNKTCDIYFMNG 477 EL + + +KI + + I+ + Sbjct: 459 AEVETEFHAELPDAHIIWKECKINELNQEVVDTFIKKINVWDEQHMEIIWNFSD 512 >UniRef50_B8I5Z3 Resolvase domain protein n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I5Z3_CLOCE Length = 534 Score = 294 bits (754), Expect = 4e-78, Method: Composition-based stats. Identities = 93/527 (17%), Positives = 197/527 (37%), Gaps = 75/527 (14%) Query: 1 MK-KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 MK K AY R S+ +SL Q++ E+++ D+ Y D G+S + ++ Sbjct: 1 MKIKVGAYCRVSTEKDDQVNSLQSQKKYFEEYIRNRPDWEFVD-IYADEGISGTQAEN-- 57 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 F + +L + + R +R +I+ +++ G+ VI + DN Sbjct: 58 RIEFQRMISDA---KYKRLDLILTKEISRFARNT-KISIDYTRMLKELGVGVIFISDN-- 111 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 I++L+ L I+ + A +ES S RVK K++ + + G + Sbjct: 112 --INTLDGDGELRLTIM-SAIAQDESRKTSERVKWGQKRRMEQGVVFGRELFGYNLY--- 165 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLR-MERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIE 238 + + + + + LIF+ +E + + IA+ L + +++ S K W +VI Sbjct: 166 ----KGTLTVNEEEAEIVRLIFRKYTIEGKGTHVIARELYEDNIQSKSYKN-RWSNTVIL 220 Query: 239 KLLANKALIGI----------CVPSYRARGKGISEI---AGYYPRVISDDLFYAVQEIRL 285 +LL N+ +G + + +G EI ++ +I +L+ A QE + Sbjct: 221 RLLKNEKYVGDLAQKKTITPNYLNHKKKYNRGEEEIVYIKNHHTPIIPRELWDATQEQII 280 Query: 286 APFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVS---GSLHGYYVCPMRRLH----- 337 + C CG+ + + G ++ + C + + Sbjct: 281 QRSASKEQKSKYSNRYWCSGKLLCGECGSNFVGRSKKLENGQVYKVWKCSRAKSYGSLKI 340 Query: 338 -------RCDRPSIKRDLV--------------DYNIINELLFNCSKIQPVENKKDANET 376 C+ SI ++ II+EL+ K+ + N K + ++ Sbjct: 341 DVNGNQVGCNNKSINHIVLGKIVKNVLYSINSNKEKIISELVSEIRKLNKLTNIK-STDS 399 Query: 377 LELKIIELQMKINNLIVA-LSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSD 435 KI +L K +I + + + + D E+ + +K ++ + + + Sbjct: 400 FTRKIKDLNRKKQEVINLMIEGSISKDDMVLMNKRYDLEINKVKTDIKNIEEINLINSRN 459 Query: 436 FYAIDLTSKNGRELCR--------TLAYKTFEKIIINTDNKTCDIYF 474 + + L + T +K+I+ +N ++YF Sbjct: 460 ADKLHIYLDRINSLVNQREENDSDEVFKLTVKKVILYKNNI-LELYF 505 >UniRef50_C7H1C6 TnpX site-specific recombinase n=10 Tax=Bacteria RepID=C7H1C6_9FIRM Length = 623 Score = 293 bits (752), Expect = 7e-78, Method: Composition-based stats. Identities = 83/588 (14%), Positives = 182/588 (30%), Gaps = 111/588 (18%) Query: 2 KKAIAYMRFSSPGQM--SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 K Y R S + +S+ Q++L+ ++ + + + + + + D G S G + + Sbjct: 10 KITALYERLSRDDDLTGDSNSIINQKKLLEDYAREHG--FTNCVHFTDDGWS---GANFE 64 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 + + IE G I +LV+ L R+ R+ + + G+ I + + Sbjct: 65 RPNWKRMIAGIESGEIG---YVLVKDLSRVGRDYLQVGFYTEVMFKERGVRFIAIANGVD 121 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 + +E ++ I+ S ++ + SG + C Sbjct: 122 SDKRESSE-FAPFLNIMN----EWYVRDSSRKITSVLHAR----GMSGKHTNSHCIYGYK 172 Query: 180 LD-DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFS------------ 226 D + + ++ D + + + I+++ +E + IA+ L V+ S Sbjct: 173 KDPNDKDHWIIDEEAAEVVRRIYRMALESKGPYEIARILALEKVERPSYYLAQRGVGKHQ 232 Query: 227 -----GKESAWGPSVIEKLLANKALIGICVPSYRAR------------GKGISEIAGYYP 269 + W + +L+ +G V + + + Sbjct: 233 SNFNPAERYTWRGGTVADILSKPEYMGHTVNFRTYKESYKDKRSRMTPKEDLVIFKNTQE 292 Query: 270 RVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHA--------- 320 +I + + VQ +R N L +M C CG M H Sbjct: 293 AIIDKETWERVQSLRKTIRRTDTIG----AANPLTGLMFCADCGAKMYNHRGGAGLARDW 348 Query: 321 ------VSGSLHGYYVCPMRRLHR------CDRPSIKRDLVDYNIINELLFNCS------ 362 Y C L C I+ +V+ ++ + C Sbjct: 349 AGRPNGRKRPERDEYNCSRYDLGNQHYNRYCTTHLIRTAVVNELLLEAIKEVCDYALNNE 408 Query: 363 --------------KIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTAIAEKI 408 +++ + + + E + EL I L + E++ Sbjct: 409 AAFMEQVCSASSERQVKAAKAIRQRKQRSEKRADELSRLIRKLYEDNVNGRLSDKLFEQM 468 Query: 409 -RLLDKELRRA-------SVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEK 460 + EL L + + VN+ F A+ + EL + + EK Sbjct: 469 LHDFEAELESLTESVTQDEQELDRISRETVNAEK-FLALVKKYTDFSELTPAMINEFVEK 527 Query: 461 IIINTDN-------KTCDIYFMNGIVFKHYPLMKVISAQQAISALKYM 501 I+++ + +I+F P +++ ++ +AL Sbjct: 528 ILVHQAEGKGASRTQEVEIFFNFVGKV-EIPHEEIVLTEEEKAALAEQ 574 >UniRef50_C7HT51 TnpX site-specific recombinase n=2 Tax=Clostridiales Family XI. Incertae Sedis RepID=C7HT51_9FIRM Length = 572 Score = 293 bits (752), Expect = 7e-78, Method: Composition-based stats. Identities = 100/546 (18%), Positives = 189/546 (34%), Gaps = 71/546 (13%) Query: 4 AIAYMRFSSPGQM--SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 A+ Y+R S +S++ QR +I + + N Y D G + G + Sbjct: 12 AVMYLRLSKEDGEKTESNSISNQREIINSYARKN--QIPIVKEYVDDG---YSGANFDRP 66 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F E + A T++V+ L R R+ + ++ +GI I++ DN Sbjct: 67 NFKEMIKAAYDRK---FNTIIVKDLSRFGRDYIEAGKYIQRIFPENGIRFISVNDNYDSK 123 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 +N+ + + + + S++VK S K KR+ G ++A P Sbjct: 124 SADINDTH--LILPIKNFINDSYCRDISNKVKSSQKIKREK----GDFISAFAPYGYKKS 177 Query: 182 DK-RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSG------------- 227 ++ + V D I+ IF +++ S AIA LN V N Sbjct: 178 EENKNKLVIDKKISDIIKNIFDMKLLGYSSKAIADELNHLGVLNPRKYKESQGFKCNGFQ 237 Query: 228 --KESAWGPSVIEKLLANKALIGICVPSYRA------------RGKGISEIAGYYPRVIS 273 K W + +++ N+ IG + + + + +IS Sbjct: 238 NTKGGTWSAKTVNRIIENEVYIGNTLQGKSVTLSYKNKKQIEKEKEEWIRVENTHEAIIS 297 Query: 274 DDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLH--GYYVC 331 ++F + N+S+ I++ ++ C+ CG+++I V +Y+C Sbjct: 298 KEVFTIANTMLKRDL---NNSRGKDKIDIFTGMLFCKECGSSLIRRTVKYKKREEIFYIC 354 Query: 332 PMRRLHR-CDRPSIKRDLVDYNII----------NELLFNCSKIQPVENKKD-ANETLEL 379 + C R SIK + + + L +I +N KD L+ Sbjct: 355 SKYNKGKSCTRHSIKEETLIKAVSKIMKSYIEFNENLYSKVQRIDINKNLKDNQIPILKR 414 Query: 380 KIIELQMKINNLI-VALSVAPEVTAIA-------EKIRLLDKELRRASVSLKTLKSKGVN 431 + + +++L EK+ LD+ + + K K Sbjct: 415 EKAMTEELLSSLYLDLKEDVISKEEYQLFRKNYTEKLTKLDESIEYRLKKQEDTKEKIDK 474 Query: 432 SFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKHYPLMKVISA 491 + S I+ KN E+ R +KI I+ D KT + F + M + Sbjct: 475 NKSWIIDINK-YKNLSEIDRLSVVMLIDKIFISED-KTIYVRFNHTEELSLLEEMTKMDK 532 Query: 492 QQAISA 497 + Sbjct: 533 SDIKAN 538 >UniRef50_C8SMT4 Recombinase n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SMT4_9RHIZ Length = 541 Score = 293 bits (752), Expect = 8e-78, Method: Composition-based stats. Identities = 89/535 (16%), Positives = 175/535 (32%), Gaps = 92/535 (17%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 M + Y R+SS Q S+ Q RL E + + TY D +S + Sbjct: 1 MTRVALYARYSSDNQREA-SIEDQLRLCREHSFK--ERWTVVRTYVDAAISGAS--IVRR 55 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 L + G +L E+LDRLSR++ + K + G+ ++TL + V Sbjct: 56 PDIQRLLSDAQSGLFE---IVLAEALDRLSRDQ-EDVAGLFKRLRFAGVTLVTLSEGAV- 110 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 +E + +K + A + +++ + + +G + + Sbjct: 111 -----DELHVGLKGTMNALF----LRDLAVKIRRGQSGRILNGYAAGGLS-----YGYRV 156 Query: 181 DDK--------RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAW 232 K R D + + + IF+ RS AIA LN + + G AW Sbjct: 157 VKKLDESGEPIRGLREIDEHQAQVVRRIFQEFSVGRSARAIAADLNKEGIPSPFG--GAW 214 Query: 233 GPSVIEKLLA-------NKALIGICVPSYRARGKG---------------ISEIAGYYPR 270 G S I L N+ IG+ V + K + + R Sbjct: 215 GASTINGNLKRRSGFLYNEIYIGLLVFNRIKMVKDPETGKRISRPNPPEKWQVMEVSHLR 274 Query: 271 VISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYV 330 ++ D L+ A Q + +G + ++ +++C CG + V Sbjct: 275 IVDDALWEAAQARKKL-YGGAKLHHRRRPKHMFSGLVRCGCCGASYTVKNQDQ-----LA 328 Query: 331 CPMRRLHR-CD-RPSIKRDLVDYNIINEL---------------LFNCSKIQPVENKKDA 373 C R C +I+ ++ ++ + ++ + + + Sbjct: 329 CAAHREKGTCTNNRTIRVGDLEKRVLAGVQRRLLAPDAIAGFLAEYHAEQKRLNAMNRQR 388 Query: 374 NETLELKIIELQMKINNLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSF 433 N+ E +++ + +I N+I A++ ++ K+ L+ E L+ + + Sbjct: 389 NKEAEKRLLGIDTQIANIIDAIADGVSTASMKSKLLDLESEKESLGRELQAMAAAESIVE 448 Query: 434 -------------SDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFM 475 S+ + K+ R + KI I I Sbjct: 449 FHPAAVEAYRRKVSELQRALQSDKSERHEAARIVRSLVAKIEIIPTQGRGQIELK 503 >UniRef50_A3VUU7 Putative uncharacterized protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VUU7_9PROT Length = 528 Score = 293 bits (751), Expect = 9e-78, Method: Composition-based stats. Identities = 99/545 (18%), Positives = 191/545 (35%), Gaps = 88/545 (16%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 KA Y R+SS Q S+ Q L + L+ + +T+ Y D +S G Sbjct: 4 KAAIYARYSSDLQS-IRSIEDQIALCRQHLEQK--SWTETVVYSDRAISG--GAMVTRPG 58 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 E + +G ++ E+LDR+SR++ A K++ HG+ ++TL + V + Sbjct: 59 IQELIRGAANGQ---FNVVVAEALDRISRDQADTA-TIYKILAFHGVSIVTLSEGEVDS- 113 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL-- 180 + + + + + SG C + Sbjct: 114 ---------MHVGFKGVMNEMFLRDLAKKTRRGQT----GVVNSGRSAGGHC-YGYDIVP 159 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVI--- 237 ++ + D +T+ I +L +E S +IA LN V G + W S I Sbjct: 160 GEQNGILTINEDEAETVRRIMRLFVEGTSPRSIAAMLNKEGVAAPRGSD--WRASTINGQ 217 Query: 238 ----EKLLANKALIGICVPSYRARGKGI-------------SEIAGYYP--RVISDDLFY 278 +L N+ IG + + R + + P R++ D+L+ Sbjct: 218 VHAGNGILNNELYIGRRIWNRRHKVTDPFSGKKRMRANPESEWVINEVPDLRIVDDELWQ 277 Query: 279 AVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHR 338 AV+ + +K P LL +++C CG M + + + Y C RR Sbjct: 278 AVKLRQQKHSRKRGGAKRPTR--LLSGLLECSVCGGPMSIVSQNR-----YGCSTRREKG 330 Query: 339 -CD-RPSIKRDLVDYNIINEL---------------LFNCSKIQPVENKKDANETLELKI 381 C +I ++ ++ L F+ ++ LE I Sbjct: 331 TCSNNRTIAAKELEERVLAGLNKALLHPDAQKAAAREFHAELVRQQRATGSERFQLEKAI 390 Query: 382 IELQMKINNLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDL 441 E +I+ ++ A++ TA+ +K+ L+ E L + S+ + S Sbjct: 391 AEADRRIDRIVDAIAEGVATTALKQKLVALETEKVENEAKLAAMGSEPIVSVH------- 443 Query: 442 TSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKHYPLMKVISAQQAISALKYM 501 N EL L E ++ + ++ I+ K + + ++ S + Sbjct: 444 --PNAGELYAELIGSLVE-VVSDPSPDADEVR---SILRKTIQRI-CLEPRKNESGYNLV 496 Query: 502 VDGEI 506 + G++ Sbjct: 497 IKGDL 501 >UniRef50_D1C6R3 Resolvase domain protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6R3_SPHTD Length = 558 Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats. Identities = 85/534 (15%), Positives = 153/534 (28%), Gaps = 80/534 (14%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 ++A Y R S+ Q S+ Q EW + + Y D S A+ Sbjct: 14 RRAAIYARVSTDRQ----SVEGQIEFAREWAPKHGYTLTE--IYADNARSG-TIPFAERE 66 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKV---GEAIERLKLILNHGIDVITLCDNT 118 A L + G +LV DRL R++ E + + I G +I + Sbjct: 67 AGRRLLIDLRAGR---FDVVLVYKYDRLGRDREVGDIETRQAILDIERAGGQIIAMTQPI 123 Query: 119 VYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWL 178 + + E R + G + P Sbjct: 124 D-----ASTIMGRFTRSVQIDIGTIERLNTLERSADTL---ATLVRRPGFFTGGTAPYGY 175 Query: 179 SLDDKRT--AFVPDPDR--------VKTIELIFKL-RMERRSLNAIAKYLNDHAVKNF-- 225 ++ + V D + + +I+ E RS IA LN + Sbjct: 176 RVEGQDRDARLVVDEEPIPGLDISPADVVRMIYHWLVAEGRSTVWIAAELNRRGIPTRAL 235 Query: 226 -----SGKESAWGPSVIEKLLANKALIGICVPSYRARGKGISEIAGY---YPRVISDDLF 277 W P + ++ N G+ V R G+ + P ++ + + Sbjct: 236 LAGRARPTAGIWRPGRVSTMVRNTVYKGVAVYGRRKSGRSPFPVPVTEREVPAIVDAETW 295 Query: 278 YAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIV---HAVSGSLHGYYVCP-- 332 A QE + +N LL ++KC ACG+ G YY C Sbjct: 296 EAAQEQL--RRNKKRAKRNAKRQYLLSGLVKCGACGSNYTGLAYTTKDGQERRYYTCNNI 353 Query: 333 ----MRRLHRCDRP--SIKRDLVDYN-----------IINELLFNCS-KIQPVENKKDAN 374 RC P S + + + + I+ EL + N + Sbjct: 354 HQRHNTGGERCTNPALSWQYEELIWRDIDAWLENPGPILEELAAQLNTDADDAGNIEADI 413 Query: 375 ETLELKIIELQMKINNLIVALSVA-PEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNS- 432 E ++ + + L+ A + T + ++ + +E ++ LK Sbjct: 414 ERRRRQLAGQEKERERLLTAYRKGIIDDTDLERELAAMRRERAVLEEEIEALKRAQQRRE 473 Query: 433 -----FSDFYAIDLTSKNGREL------CRTLAYKTFEKIIINTDNKTCDIYFM 475 A+ K R R + ++I++ D Y Sbjct: 474 ERRAGLVTAAALLEELKARRREGLTFAVKRQVVEALVKEIVVQPDGTPDVTYRF 527 >UniRef50_A3DG43 Recombinase n=6 Tax=root RepID=A3DG43_CLOTH Length = 429 Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats. Identities = 73/377 (19%), Positives = 143/377 (37%), Gaps = 42/377 (11%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 + AY R S+ G+SL Q + + N DY + D G++ Sbjct: 18 RVCAYARVSTGSDAQGESLENQIQYYENLISNNPDYEY-AGVFADRGITGTTD---NRPE 73 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F L+ + G I ++ +S+ R +R ++ ++ + + G+++I +N I Sbjct: 74 FQRMLNLAKEGKI---DLIITKSISRFARNTAI-MLQVVRELKDIGVEIIFEKEN----I 125 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 +L+ L+ +L + A EES+ S +K KKK + G ++ + D Sbjct: 126 RTLSGDGELMLTVL-SSFAQEESKNISDNLKWRVKKKFER----GELIINTTRFLGYDKD 180 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 + V +P + ++ IF+ ++ + IAK LN+ V +G W S I +L Sbjct: 181 EYGDLVINPKEAEIVKRIFEDYLKGKGTFTIAKELNEDKVPTVAG--GRWQESTILNILK 238 Query: 243 NKALIGICVPSYR----------ARGKGISE---IAGYYPRVISDDLFYAVQEIRLAPFG 289 N+ G + R +G+ + I + ++S +++ VQ Sbjct: 239 NEKYKGDAILQKYYTPDHLRKVSVRNEGVIDSYYIEDNHSPIVSREMWEQVQIEIARRAK 298 Query: 290 ISNSS----KNPMLINLLRTVMKCEACGNTMIVHAVSGS---LHGYYVCPMRRLHR---C 339 + K L ++ C CG+T+ + + C + C Sbjct: 299 AKGNKAGDTKKYTNRYPLTGMLFCSKCGSTLRRRTWNSKLNCRKIVWQCSNYIKNGKDAC 358 Query: 340 DRPSIKRDLVDYNIINE 356 SI +++ I E Sbjct: 359 SGTSIDDEVISRLNIEE 375 >UniRef50_UPI000197392E cassette chromosome recombinase B n=1 Tax=Clostridium sp. M62/1 RepID=UPI000197392E Length = 523 Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats. Identities = 84/534 (15%), Positives = 167/534 (31%), Gaps = 80/534 (14%) Query: 1 MKK-AIAYMRFSSPG--------QMSGDSLNRQRRLIAEWLKVNSDYYLDT-ITYEDLGL 50 MK+ Y+R S + +S+ QR LI L N I + D G Sbjct: 1 MKQQIAIYLRLSLEDVDKRTNKIKDESNSIASQRMLINRHLDQNPLLCDLPRIEFCDDG- 59 Query: 51 SAFKGKHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGID 110 F G + F++ ++ +HG I + ++V+ L R R+ + + GI Sbjct: 60 --FSGTNFDRPDFAKMIEYAKHGEI---SCIVVKDLSRFGRDYLEVGDYLEHIFPFLGIR 114 Query: 111 VITLCDNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIM 170 ++ D+ + + S+ S +VK + K++ A Sbjct: 115 FKSINDHYDSAKHEGKTIG--MDIAFKNLIYDYYSKDLSKKVKSAMGMKQEKAK-----F 167 Query: 171 TASCPRWLSLDD-KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNF---- 225 + P D + + D + + IF + +S IAK LN + Sbjct: 168 VNTVPYGYKADPADKHHLIIDVETAPIVHRIFMEVIGGKSCTQIAKELNTEGIPTPAQHK 227 Query: 226 ------SGKESAWGPSVIEKLLANKALIGICVPS------------YRARGKGISEIAGY 267 S K+ W I ++ + G V R + Sbjct: 228 AVSRKASSKKPQWTHRGILTMIESVKYTGTMVNHIRESRFIRDKNQRRVPKEEWYIRENA 287 Query: 268 YPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHG 327 + +++ D + QE SS + C CG + + Sbjct: 288 HEAIVTKDEYEQAQEAIQRRRKFVRSSHDQSDRVYF-----CAHCGGKLEKANGT----- 337 Query: 328 YYVCPMRRLHR---CDRPSIKRDLVDYNIINELLFNC-----SKIQPVENKKDANETLEL 379 + CP R H C+ ++ ++ + L + K E+LE Sbjct: 338 VFACPSHRYHDGSPCENVRWRKSALEEIVFEALKRQIEIVSVESAAVRKAAKSKGESLER 397 Query: 380 KIIELQMK---------------INNLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKT 424 +++ L+ + + A+A+K L ++L L+ Sbjct: 398 QLVLLKAQYDACDREKFTIYENYREGKLTPEEYLSGKDALAQKQAALKEQLESCETQLEV 457 Query: 425 LKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGI 478 + +++ A + + R Y E++++ D +T +I + Sbjct: 458 FHQQSLDAEERHEAASRMTGLSDDKLREHLYDAVERVLVY-DTETIEIVWKFNE 510 >UniRef50_A5MYI4 Phage invertase/recombinase-related protein n=6 Tax=Clostridium RepID=A5MYI4_CLOK5 Length = 549 Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats. Identities = 104/551 (18%), Positives = 191/551 (34%), Gaps = 97/551 (17%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVN-SDYYLDTITYEDLGLSAFKGKHAQSG 61 KA Y R S G+S+ Q +L E+ + N + + I YED G F G + Sbjct: 5 KAAIYSRKSLFTG-KGESIENQIQLCKEYGEKNLNLKNDNFIIYEDEG---FSGGNTNRP 60 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F E L ++ L+ LDR+SR V + L+L+ H I +++ + + Sbjct: 61 KFQELLKDVKKRK---FDVLMCYRLDRISRN-VADFSTTLELLQQHNISFVSIKEQFDTS 116 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS-- 179 P + + A E E + R++ + + + +G + P Sbjct: 117 T-----PMGKAMVYISSVFAQLERETIAERIRDNMIQLAK----TGRWLGGQTPLGFDSQ 167 Query: 180 ---------LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKES 230 + P + +K ++LI+ +E S++ + KYL + ++ +G + Sbjct: 168 KILYYNSEMKEKSMYKLSPVKEELKKVKLIYNKYIEFGSISLVLKYLLSNNIRGKNGGD- 226 Query: 231 AWGPSVIEKLLANKALI------------------------GICVPSYR------ARGKG 260 + I +L N + GI + R + Sbjct: 227 -FASMSINDILRNPVYVKSDDGVFKYLSDSGIITCGTPNGNGIMTYNKRNSKYVPKKKTE 285 Query: 261 ISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHA 320 G + VI + + VQ +N + +LL V+KC CG M V Sbjct: 286 WIAAIGKHEGVIDSNTWLEVQFRLNKNKKKANPRQGTSKKSLLSGVLKCALCGAPMRVCY 345 Query: 321 VSGSLH-----GYYVCPMR---RLHRCDRPSIKRDLVDYNIINELLFNCSKIQPVENKKD 372 YY+C M+ RCD P++K ++ II + + E + Sbjct: 346 GRPKKDGSERIYYYMCTMKAHSAKSRCDNPNVKGPELEKAIIENIKQLNTTKILKELQVA 405 Query: 373 AN-----------ETLELKIIELQMKINNLIVALS-----VAPEVTAIAEKIRLLDKELR 416 N ET+ +I + +IN L+ L+ + I KI L E++ Sbjct: 406 KNEAAVSIENNFTETITKEIKDKSDQINTLLEQLAHTNANNSIASEFITSKIESLGNEIK 465 Query: 417 RASVSLKTLKSKGVNSFSDFYAIDLTSKNGREL------------CRTLAYKTFEKIIIN 464 + ++ L+ K + ++ K+ E R + +K+ N Sbjct: 466 KLNLKLEKSKDTKQENIQKKLNFEIIEKSLHEFNSSFDMIKDTSKKRLILENIIDKVYWN 525 Query: 465 TDNKTCDIYFM 475 + DI Sbjct: 526 GNTGDVDIQLW 536 >UniRef50_B1C3Z4 Putative uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3Z4_9FIRM Length = 546 Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats. Identities = 89/538 (16%), Positives = 179/538 (33%), Gaps = 86/538 (15%) Query: 4 AIAYMRFSSPGQ--MSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 AY R S S+ Q+ +I + K N + Y D G F G + Sbjct: 19 VGAYERLSKEDDKKDESSSIESQKMIIESFAKFNQLKII--KHYSDDG---FTGSNFNRP 73 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 AF + IE G I ++V+ L RL RE + L+ + I + D N Sbjct: 74 AFEALKNDIEKGII---NCVIVKDLSRLGRELYETGGYIEEYFLSKQVRFIAINDGYDSN 130 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 + + + S +++ S+ KR+ G + + D Sbjct: 131 VGDA-------MLGIRLSVNDLYLRDTSKKIRSSFDAKRKK----GDYIGSFAKYGYQKD 179 Query: 182 DKR-TAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKE----------- 229 + + DP K ++ +F+ ++ + IA L + S + Sbjct: 180 PQNPKHLIIDPVTSKIVKQMFEWVVQGLGTSTIAHRLTKAKIPIPSIYKKEDRTNHQNKL 239 Query: 230 ----SAWGPSVIEKLLANKALIGICVPSYRARGKG------------ISEIAGYYPRVIS 273 W P ++ +++++ +G V S + + + ++S Sbjct: 240 NDGLGIWRPQTVKNIVSDQMYLGHMVQSRWKKLSYNSKKLVELPPSSWIIVKNTHEPIVS 299 Query: 274 DDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHG------ 327 +LF AVQ+ L + ++KC+ CG+ + + + Sbjct: 300 QELFDAVQQELSKYHKYRAHHGKR---FLFQGLLKCKECGHNLSISTRKTKKNVQHWTQC 356 Query: 328 YYVCPMRRLHRCDRPSIKRDLVDYNIINELLFNCSKIQPVEN------------------ 369 Y + C + DL++ +++ L F K N Sbjct: 357 NYYSKYSKYGMCTSHRLNYDLLEKDLLKFLKFAGKKFLEDYNYECLLNESMQICQKKLVE 416 Query: 370 KKDANETLELKIIELQMKINNLI-VALSVAPEVTAIAEKIRLLDKELRRASVSLKTL--- 425 KDA + ++ +I++ + + L L V + ++ EL V L Sbjct: 417 IKDALKKVQREILKKERMLTRLYEDRLDEIISVKQYTLVSKKIENELNDLEVKKNELTKS 476 Query: 426 ----KSKGVNSFSDFYAIDLTSKNGREL-CRTLAYKTFEKIIINTDNKTCDIYFMNGI 478 K+ +++ + Y + + L ++ +KI I+ D K +++F I Sbjct: 477 VLLYKNDYLDNDIEKYRQMINDFMSFKFPTNELMFQLIDKIEIDKD-KNVEVFFKVNI 533 >UniRef50_D2MPD5 TnpX site-specific recombinase family protein n=6 Tax=Firmicutes RepID=D2MPD5_9FIRM Length = 556 Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats. Identities = 77/552 (13%), Positives = 180/552 (32%), Gaps = 100/552 (18%) Query: 4 AIAYMRFSSPG--QMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 Y R S Q +S+ Q++L+ + K N +++ Y D G+S Sbjct: 10 TALYERLSRDDEMQGESNSITNQKQLLESYAKRNG--FVNIYHYTDDGVSGTT---FDRE 64 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F + + A+E + +T++V+ + R R+ + L G+ I + + Sbjct: 65 GFQKMIKAVEENKV---STVIVKDMSRFGRDYLKVGFYTEILFKEKGVRFIAINNGIDSE 121 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 + ++ ++ I+ A S +++ ++ + +E G ++ S P + Sbjct: 122 KQAESD-FTPFLNIMNEWYA----RDTSRKIQSIFRAR----MEEGKRVSPSVPYGYYRN 172 Query: 182 DKRT-AFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGK------------ 228 K + D + K ++ I+ L +E + IA L V S Sbjct: 173 PKNKQELLVDKESAKVVKRIYHLVIEGYGVTQIADILTKDKVLIPSAYAEIHYPENNHSS 232 Query: 229 -------ESAWGPSVIEKLLANKALIGICVPSY------------RARGKGISEIAGYYP 269 W P+ + +L + +G V +A+ + + Sbjct: 233 KKRGIDDPYFWTPTTVGYILEKREYMGHNVLGKTICLDYKTKKRRKAKEDELIIFKNTHE 292 Query: 270 RVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVH---AVSGSLH 326 +I ++ + Q + + S K + ++ C CG + + Sbjct: 293 AIIDEETWNNAQRL---RKTVRRSPKYGTTSHPFTGLLICSDCGGKLSYREPAEHKEKKY 349 Query: 327 ---GYYVCP--MRRLHRCDRPSIKRDLVDYNIINELLF-------------NCSKIQPVE 368 +VC R C IK V+ ++ + E Sbjct: 350 DSDYSFVCQHYRHRKGTCSMHYIKVKTVNEILLKSIKEITDFAKEEKQEFLKVMNKLSDE 409 Query: 369 NKKDANETLELKIIELQMKINNLIVALSVAPEV---------------TAIAEKIRLLDK 413 +++ + + K+ +L + L ++ E + + L+K Sbjct: 410 KREEKYQGDKEKLEKLSSRNTELTTLITKLYEDHALGKIPVKHFDRLFNTYDTEQQDLEK 469 Query: 414 ELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINT-------- 465 +++ +++ + V+ F + + EL + + EK++++ Sbjct: 470 QIQYFEQEIESYHQRKVD-TDKFLKMIEKYTDIEELTVPMINEYIEKVVVHEATGGRKGK 528 Query: 466 -DNKTCDIYFMN 476 + D+YF Sbjct: 529 DRKQQVDVYFNF 540 >UniRef50_UPI0001C37E7C hypothetical protein RflaF_15886 n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37E7C Length = 513 Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats. Identities = 89/518 (17%), Positives = 180/518 (34%), Gaps = 64/518 (12%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLI-AEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 + AY R SS + S Q + +++ + Y D G+S A+ Sbjct: 20 RCAAYCRVSSSSEDQLHSYAAQVKFYSEKFIGS--ETEELVDIYADEGISGT--GTAKRT 75 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F + + G I + +SL R +R + + ++L+ GI + +N Sbjct: 76 EFQRLIRDCKRGKI---DRIYAKSLSRFARNT-KDCLNTVRLLRELGISIYFEKEN---- 127 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 ID+ LI ++ A EES + ++ +K+ + G + P Sbjct: 128 IDTAKTNDELIITVM-GSLAQEESTSIAQNMRWGIRKQMEK----GAFKPRTAPFGYKS- 181 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 + + D + ++ IF+ + IA LND K+ W +++ +L Sbjct: 182 -ENGKLIIDEQESEIVKEIFRWYLSGIGTTQIANKLNDQ-YGRKGEKQIKWCHTIVRYIL 239 Query: 242 ANKALIGIC-------------VPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPF 288 +N+ IG V + + + +IS D F VQ++ Sbjct: 240 SNERYIGDLLLEKTYRTDTLPSVKKKNNGERDQFYVTESHDAIISRDEFEKVQQLMSKMA 299 Query: 289 GISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHR--CDRPSIKR 346 K ++ ++++C CG+ +G+ Y+ C + C I Sbjct: 300 VRYQPEK--KNKYIIGSILECGECGSGYRRKCNNGT--YYWTCTSHDKNADNCPAKLIPE 355 Query: 347 DLVDYNII---NELLFNCSKIQPVENK------------KDANETLELKIIELQMKINNL 391 D++ I N+L+ + +I + + I +++ + + L Sbjct: 356 DIIKQAFISMCNKLIQHYREILLPLRRSLQELNMRRFSGNTKIIDIHKNIADIKEQRHVL 415 Query: 392 IVALSVA-PEVTAIAEKIRLLDKELRRASVSLKT-LKSKGVNSFSDFYAIDLTSKN---- 445 + EK+ L+ +L R LK K+ + + I + S Sbjct: 416 SRLRKKGFMDEKKYNEKLTELESQLARQERELKKTAKADNEDDTLEQLDILIDSIEKQDN 475 Query: 446 -GRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKH 482 E L E+II+ +K+ + ++G+ K Sbjct: 476 ITTEFDEELFGIIVERIIV--RDKSLEFILISGLSLKE 511 >UniRef50_B8FU52 Resolvase domain protein n=2 Tax=Clostridiales RepID=B8FU52_DESHD Length = 526 Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats. Identities = 87/517 (16%), Positives = 177/517 (34%), Gaps = 62/517 (11%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 + AY R SS +S Q + + + + L Y D G++ + Sbjct: 28 RVAAYARVSSDSDDQQNSYIAQVDYYTKNIATHEGWEL-ADIYADEGITGLVAS--KRDD 84 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F+ + G I +LV+S+ R +R E I+ ++ +L GI + +N Sbjct: 85 FNRMIQDCRDGKI---DRVLVKSISRFARNT-KEYIQYVRELLRLGISIHFEKENIDTGK 140 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 + + A + + ES+ S+ +++S + + + GT ++ S P L++ Sbjct: 141 MTSEQ-----IATIYGAFSQMESQNHSNNMRISVRMRMEK----GTYISPSTPYGYKLEE 191 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 A V P++ + + IF + + IA LN + + W + I +L Sbjct: 192 --RALVIIPEQAEVVRRIFTAYLSGQGKEDIANELNRMGIP-RTKDRKMWYSTTIGYILT 248 Query: 243 NKALIGICVPSY-------------RARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFG 289 N + G V K + + ++S D F VQ + Sbjct: 249 NISYTGDMVWQKSFATNDIPFRQVRNKGEKPKYFVENCHEPIVSQDEFQRVQALLETRRL 308 Query: 290 ISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHR--CDRPSIKRD 347 + + LL+ + C CG V+ + Y+ C H+ C + + Sbjct: 309 QIAGTVSSA---LLKKKLHCGNCGTLFRRKIVNEKV--YWACRRHDSHKDLCPISQVPEE 363 Query: 348 LVDYNIINE--------------LLFNCSKIQPVE-NKKDANETLELKIIELQMKINNLI 392 + I+ LL ++++ E ++ +I +L + L+ Sbjct: 364 QIITAILRMYHKLKRHREQILSPLLSQLTELREKELRSNRKINDIDKEIAQLTEQNLVLV 423 Query: 393 VALSVA-PEVTAIAEKIRLLDKELRRASVSLKTL-----KSKGVNSFSDFYAIDLTSKNG 446 S + + +D +LR + + + + + +S Sbjct: 424 RLKSKGYVDSALYLSQTGDIDFKLRELRRLRRRIMETTGEDGQIKATETMLDYLESSPEH 483 Query: 447 R-ELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKH 482 EL L E I I++ ++ NG+ K Sbjct: 484 LGELTEELFETLVENITISS-ETEMNLTLYNGLTLKE 519 >UniRef50_Q2RI69 Resolvase-like n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RI69_MOOTA Length = 546 Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats. Identities = 85/520 (16%), Positives = 169/520 (32%), Gaps = 69/520 (13%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 KA+ Y R S+ Q G SL Q+ L + + ++ + A+ G + Sbjct: 2 KAVIYARVSTQDQALGFSLATQKELCEKKARALGALEVEVVE------DAYTGTELNRPS 55 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 + G + ++V DRLSR + + + + G+ + + Sbjct: 56 LDYVRQLVAAGKV---DLVVVYDPDRLSRN-LTDLLILCREFDKAGVRLEFVN------F 105 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 D P ++ + A E + R + KK SG I + P D Sbjct: 106 DWQKTPQGMLFLQMRGAFAEFEHALIKERTQRGKAKKA----ASGKIRCYAKPFGYDWDA 161 Query: 183 KRTAFVPDPDRVKTIELIFKLR---MERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEK 239 +R V +P ++ +F+ +E + I + L + GK W S + + Sbjct: 162 ERDTLVINPQEAAIVKQMFEWLTDPLEPLTPWQITQKLGQVYPQGPRGKG--WVHSSVVR 219 Query: 240 LLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPML 299 +L N G R + + P +I + F QE+ + + Sbjct: 220 MLKNPVYTGRL----RRKDEQPDWKPVLVPAIIDQETFMRAQEMLARSKRFNPKTTRRRF 275 Query: 300 INLLRTVMKCEACGNTMIVHAVSGS---LHGYYVCPMR---------RLHRCDRPSIKRD 347 + + ++ C CG + V + + YY CP R R+ RC P + + Sbjct: 276 LL--QRLLVCGECGRRLTVVTHNNPQRAKYSYYTCPGRYPTKFDDQGRVGRCGLPPWRTE 333 Query: 348 LVDYNIINELLFNC------------SKIQPVENKKDANETLELKIIELQMKINNLIVA- 394 +D + + + K++ + E ++ ++Q I + A Sbjct: 334 EIDKTVWDTIASIIKNPELFYQYITSEKLETASIPRRRLEEARKRLEQVQRVIERIDRAY 393 Query: 395 -LSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCR-- 451 + A + EL R +K L++ ++ + L R Sbjct: 394 FILEALPEEDYKRYRAEQEGELVRIEEDIKRLEAVINAQEQVQKGVEFLRQYAENLARSV 453 Query: 452 ---------TLAYKTFEKIIINTDNKTCDIYFMNGIVFKH 482 + + +++ I D + +I I F Sbjct: 454 DELNFFQKQNITRELVQRVKIYADG-SLEIEGYFNIPFTG 492 >UniRef50_Q1QGT0 Recombinase n=2 Tax=Bradyrhizobiaceae RepID=Q1QGT0_NITHX Length = 537 Score = 291 bits (746), Expect = 4e-77, Method: Composition-based stats. Identities = 91/526 (17%), Positives = 176/526 (33%), Gaps = 82/526 (15%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 KA Y RFSS Q S+ Q L + + Y+D +S Sbjct: 2 KAAIYARFSSDKQTDR-SIEDQVALCRAICEREG--LIVVAVYDDRAISGAST--LNRLG 56 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 + + + G L+ E+LDR+SR++ + K + GI++ T D +I Sbjct: 57 WQRLMRDAKAGK---FDVLVAEALDRISRDQ-EDLAGIHKRLRFAGIEIRTAQDGIAGDI 112 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 + + + + + + +D +G P + Sbjct: 113 H----------IGVKGLLGSLYLKDLAQKTRRGQAGVIRDGRHNGGRSYGYRP----IPG 158 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVI----- 237 KR D T+ IF ++ RS IA LN V G W S I Sbjct: 159 KRGELEIDEAEAATVRQIFADYLDARSPRDIAAALNKKGVPGPRG--GVWNASTIAGSRK 216 Query: 238 --EKLLANKALIGICVPSYRARGKGISE---------------IAGYYPRVISDDLFYAV 280 +L N+ +G V + + K + R+I D + V Sbjct: 217 RLNGILQNELYVGRIVWNRQTFIKDPETGKRISRENPREQWMSADAEHLRIIDADTWVRV 276 Query: 281 QEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPM-RRLHRC 339 ++ R G + +LL ++KC CG+ IV + VC + C Sbjct: 277 RKRREDR-GGPKGAYATRPKHLLSGLVKCGCCGSGYIV-GGNDKRGSLLVCTRMKETGLC 334 Query: 340 DRPS-IKRDLVDYNIINELLFNCSKIQPVENKKDANETLELKI--------IELQMKINN 390 + + R+ ++ ++ + N + + + + ++ +L+ ++ N Sbjct: 335 ENRRTVPREKIEALVLKGIEENLAAPELIAEYVREYHRMSRELHSSTAHRHRDLEKRLGN 394 Query: 391 LIVALSVAPEV-------TAIAEKIRLLDKELRRASVSLKTL-------KSKGVNSFSD- 435 + A+S A +V A+ +++ L+ E + L N++ D Sbjct: 395 VNGAISKAVDVLLAEAPSRALRDRLAALEAERDEIEAEIAALAPPAVEFHPNAANAYRDK 454 Query: 436 ----FYAIDLTSKNGRELCRTLAYKTFEKIIINTDN----KTCDIY 473 A+ + ++ R + EK++I+ +IY Sbjct: 455 VRHLKRALAESDEDSRAAAHEAIREIVEKVVIHPRGPYKPVEIEIY 500 >UniRef50_C6JA26 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JA26_9FIRM Length = 570 Score = 291 bits (746), Expect = 4e-77, Method: Composition-based stats. Identities = 90/546 (16%), Positives = 175/546 (32%), Gaps = 92/546 (16%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 +K + Y R S+ + +L Q+ L+ + ++ Y D G++ K + Sbjct: 9 RKVVIYARVSTEHEAQLSALENQKDWYKPILQQHPEW-DIVKMYVDEGITGTSAK--KRP 65 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F + + G +L + R +R V + + + G++V L DN Sbjct: 66 QFMQMIQDASSG---NFDLILTREVSRFARNTVDTLQYT-RELKSKGVEVFFLNDN---- 117 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 I + + L I+ A A +ES S RVK + ++E+G Sbjct: 118 IKTFDGDGELRLTIM-ATLAQDESRKTSVRVKSGQQT----SMENGVFYGNGNILGYDRV 172 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 V +P++ KT+ +IF ++ + I L GK + W S I K+L Sbjct: 173 G--KDMVINPEQAKTVRMIFDWYLDGWGMRKIQFELEKAGRLTAMGKSN-WHVSNISKIL 229 Query: 242 ANKALIGICVPSY--------RARGKGISEIA-----GYYPRVISDDLFYAVQEIRLAPF 288 N GI + + + ++ G + +I+++ + Q+ + Sbjct: 230 RNSFYCGIITYHKEFTPDFLEQKKIRNFGDMEFTQVRGNHKPIITEEEYDQAQKRINSRR 289 Query: 289 GISNSSKNPMLIN-------LLRTVMKCEACG----NTMIVHAVSGSLHGYYVCPMRRLH 337 + + + + +++C CG M + G +GY R Sbjct: 290 KTLSVDTSGQRMYGEKPPSDVWVKLLEC-ECGHKFNRKMWHNTTEGKQYGYQCYSSIRTG 348 Query: 338 R--------------CDRPSIKRDLVD---YNIINE---------------LLFNCSKIQ 365 C P I + I L + + Sbjct: 349 TVRTRLNKGLPIDGICQTPMIAGWKLQMMAKYIFKNYLSDTDQVLSLAESMLEKHIDDEE 408 Query: 366 PVENKKDANETLELKIIELQMKINNLIVALSVAP-EVTAIAEKIRLLDKELRRASVSLKT 424 V + D + ++ +L +++NLI + K + + + L Sbjct: 409 EVCDNTDIINQKKEELQKLLKRLDNLIEMRADGELTRDIFILKKESTENSISQLKKELAE 468 Query: 425 LKSKGVNSFSD-----------FYAIDLTSKNGRELC--RTLAYKTFEKIIINTDNKTCD 471 L+ + S D YA+D + + ++ EKII D D Sbjct: 469 LEPSEIESEIDEVTSKEKITILKYALDQYTNFDSDADIPESVIEAFVEKIIARKDG--FD 526 Query: 472 IYFMNG 477 Y Sbjct: 527 WYLRFN 532 >UniRef50_Q892F0 DNA integration/recombination protein n=1 Tax=Clostridium tetani RepID=Q892F0_CLOTE Length = 499 Score = 291 bits (745), Expect = 5e-77, Method: Composition-based stats. Identities = 84/507 (16%), Positives = 178/507 (35%), Gaps = 65/507 (12%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 +A+AY RFSS Q +S+ Q I ++ N+ Y D +S + + Sbjct: 7 RAVAYARFSSDNQRE-ESIEAQIMDIKKYALKNN--ITVLREYVDEAISGRT---FERKS 60 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F ++ + +LV +DR +R + AI + ++ H I + + Sbjct: 61 FKRMIEDAKK---NMFDLILVHKVDRFARNRYDAAIYK-SILKKHNIKIKYVMQPID--- 113 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 + P + ++ A SE ++ V K + A +G P + + Sbjct: 114 ---DSPEGNLMEGILESFAEYYSENLANEVMKGLKINAKKAQFNG----GYPPLGYDIAE 166 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 + ++ + + + IF L ++ IA LN+ KN GK + I +L Sbjct: 167 DK-TYIINEREARIVREIFDLYLDGIGYKKIADILNNKGYKNKRGKPFVFN--SIPTILK 223 Query: 243 NKALIGICVPSYRARG--------------KGISEIAGYYPRVISDDLFYAVQEIRLAPF 288 N GI + +R + I + P++IS + F Q+ Sbjct: 224 NDKYCGIYTYNKTSRKYKNGRRNLKKYNKDEDIIRVEDGIPKIISKEKFNTAQQEIKKRT 283 Query: 289 GISNSSKNPMLINLLRTVMKCEACGNTMIV----HAVSGSLHGYYVCPMRRLHRCDRPSI 344 S K + +L ++KC C M + + + YY C C+ SI Sbjct: 284 K-SRGKKIAVREYILSGLIKC-ECERKMSGYAQKRSKESNRYFYYRCT-----GCNN-SI 335 Query: 345 KRDLVD--------YNIINELLFNCSKIQPVENKKD-----ANETLELKIIELQMKINNL 391 + + ++ + ++ KI ++ + L+ ++ +INN+ Sbjct: 336 RAEKIETIATNFIKEQVFRDIDNLIIKIHKYIADQEAESPSELKYLKNELSNSNNQINNI 395 Query: 392 IVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSK---GVNSFSDFYAIDLTSKNGRE 448 + +S +A+K+ L+ + + + + ++ S + + Sbjct: 396 VKMISNGVTSMHLAKKLEELETYIDGIQQRIGEINRMSVIPEDEIKNWLLELKNSFDNGK 455 Query: 449 LCRTLAYKTFEKIIINTDNKTCDIYFM 475 + + + I I ++ D + Sbjct: 456 NIKKIISVFIKNIEITKEDINIDFFVK 482 >UniRef50_Q24RX5 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=Q24RX5_DESHY Length = 539 Score = 291 bits (745), Expect = 5e-77, Method: Composition-based stats. Identities = 94/520 (18%), Positives = 179/520 (34%), Gaps = 60/520 (11%) Query: 2 KKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 K+ AY R SS +S Q ++ D+ Y D S K K + Sbjct: 23 KRVCAYCRVSSDSWEQQNSFTAQLEYYQSLIEGREDWQF-AGIYADEARSGTKLK--KRD 79 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F + E G I ++ +S+ R +R V ++I+ ++ + GI V +N Sbjct: 80 DFLRMMKDCEAGRI---DMIITKSVTRFARNTV-DSIQAIRRLKELGIAVFFEKEN---- 131 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 I+SL+E + IL + A E+E S+ K K+ QD GT + ++ + + Sbjct: 132 INSLSEKSEQMLTIL-SSLAQGEAEGVSTNNKWGILKRFQD----GTYIISTPAYGYT-N 185 Query: 182 DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 ++ + + IF+ + + + IAK L++ + G E+ W +VI+++L Sbjct: 186 NENGELIIQEAEAAVVRRIFRDYLNGKGTHIIAKELSEEGIPTICGAET-WQAAVIKEIL 244 Query: 242 ANKALIGIC----------VPSYRARGKGISE---IAGYYPRVISDDLFYAVQEIRLAPF 288 N G VP R R +G I + +I + AV +I Sbjct: 245 INPVYTGNLLQQKSLTTEGVPFKRKRNRGQLPQYLIEDNHAAIIPQEAANAVIDIFAYRR 304 Query: 289 GISNSSKNPM--LINLLRTVMKCEACGNTMIVHA---VSGSLHGYYVCPMRRLHR--CDR 341 + + C CG + C + C + Sbjct: 305 KQMGLDDPAKCQNRYAFSSKIHCGECGGIFHRQKIYAGKSYETIQWGCIRHIKNGEQCGQ 364 Query: 342 PSIKRDLVDYN--------------IINELLFNCSKIQPVENKKDANETLELKIIELQMK 387 SI+ D++ I+ LL K++ E ++ +I+EL + Sbjct: 365 KSIREDVIQRAFAVMWNKLITNSDKILLPLLEMLKKLRIDEAQEQEIGACHNRIMELTEQ 424 Query: 388 INNLIVALSVA-PEVTAIAEKIRLLDKELRRASVSLKTL------KSKGVNSFSDFYAID 440 ++ L + + + E+ L EL L + + I Sbjct: 425 VHILSRLAAKGYMDPALLIERQNTLAIELVAVKKKRNQLLDNNGFDREIAGTELMLELIR 484 Query: 441 LTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVF 480 + L + +K+I+ + + +N + Sbjct: 485 KNPHVIEKYREDLFLQAIDKVIVQKNGQ-ITFRLINRLEL 523 >UniRef50_Q041M5 Site-specific recombinase, DNA invertase Pin related protein n=15 Tax=Firmicutes RepID=Q041M5_LACGA Length = 506 Score = 291 bits (745), Expect = 5e-77, Method: Composition-based stats. Identities = 83/497 (16%), Positives = 177/497 (35%), Gaps = 64/497 (12%) Query: 24 QRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFSEFLDAIEHGYILPGTTLLV 83 Q E ++ + Y D G+S K + F++ + A + G I ++ Sbjct: 32 QVDHYKELIQKEPPWEF-AGIYADDGISGTNTK--KREQFNKMIAACKVGKI---DLIVT 85 Query: 84 ESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDSLNEPYSLIKAILIAQRANE 143 +S+ R +R + + ++ ++ + + + +N I++++ ++ I+ A A + Sbjct: 86 KSISRFARNTI-DCLKYIRDLKAINVAIFFEKEN----INTMDAKGEVLITIM-ASLAQQ 139 Query: 144 ESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDKRTAFVPDPDRVKTIELIFKL 203 ESE S VK+ + + Q + + + D + V +P+ K I+ IF Sbjct: 140 ESESLSQNVKMGIQYRYQQGK---VFVNHNHFLGYTKDAQGN-LVIEPEEAKVIKRIFYS 195 Query: 204 RMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLANKALIG----------ICVPS 253 + ++ IA L + GK W S + K+L N+ +G + Sbjct: 196 YLNGMTMKQIADSLKADGILT-GGKTKNWRSSSVAKILKNEKYMGDALLQKTYTVDFLNK 254 Query: 254 YRARGKGISE---IAGYYPRVISDDLFYAVQEIRLAPFG----ISNSSKNPMLINLLRTV 306 R + +GI + +P +I +F VQ+I + + Sbjct: 255 KRVKNEGIMPQYYVENDHPAIIPKSVFMQVQQIIKQRRNGITTKNGKHRRINGKYCFSQK 314 Query: 307 MKCEACG----NTMIVHAVSGSLHGYYVC-----PMRRLHRCDRPSIKRDLVDYNIINEL 357 + C CG M + C + RC ++K L+ + Sbjct: 315 VFCGKCGDILQRNMWYRPEK---VAVWRCASRVRRNKTGRRCMIRNVKEPLLKEATVEAF 371 Query: 358 LFNCSKIQPVENKKDA-------------NETLELKIIELQMKINNLIVALSVAPEVTAI 404 + + A + ++ ++ E+QMK LI A + + A+ Sbjct: 372 NQLIEGHELASKQIKANIMKVIKNSKGPTLDQIDQQLEEVQMK---LIQAANQHQDCDAL 428 Query: 405 AEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIIN 464 ++I L ++ + ++K + ++L + L + EKI I Sbjct: 429 TQQIMDLRRQKEKVQSRETDQQAKLHSIDEINELVNLHKYGLVDFDEQLVRRLVEKITIF 488 Query: 465 TDNKTCDIYFMNGIVFK 481 + + F +G V + Sbjct: 489 --QRYMEFTFKDGEVIR 503 >UniRef50_UPI0001BC6B74 site-specific recombinase n=1 Tax=Vibrio parahaemolyticus AQ4037 RepID=UPI0001BC6B74 Length = 531 Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats. Identities = 129/491 (26%), Positives = 230/491 (46%), Gaps = 20/491 (4%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 M A +Y+RFSS Q GDSL RQ +L ++ N+ DT T+ DLG+SAF ++Q Sbjct: 1 MAIAYSYIRFSSSQQSQGDSLRRQTQLAEKYCIENNLTLSDT-TFRDLGVSAFHSTNSQE 59 Query: 61 G-AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 +FL A+ G I G+ LLVESLDRLSR KV A+ ++ I+ G+ ++TL DN + Sbjct: 60 DSGLGQFLSALNQGRINEGSYLLVESLDRLSRAKVQTALRQMLNIIELGVKIVTLMDNRI 119 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 Y+ +S + LI ++ I +RA+ ES+ KS R+K +W KRQ+ + +S P WLS Sbjct: 120 YDQES--DTTDLIISLTIMERAHNESKTKSERIKAAWVHKRQNPTTTNRH--SSTPFWLS 175 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEK 239 L+ + + V+ + I++L ++ + I ++LN+ +K G +W + + + Sbjct: 176 LNPDKKTYKLKEKYVEIVRKIYQLSIDGWGVIKIVRHLNESNIKAPKG--GSWATTTVSR 233 Query: 240 LLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPML 299 +L +KA++G P + ++ I YYP +I + +Y ++ + + + Sbjct: 234 VLTSKAVLGHYEPMQNRKSLNLT-IEDYYPSIIDEATYYLSRQRQNERSKPEAAGRKTNY 292 Query: 300 INLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINELLF 359 N L + KC+ CG++M S SL Y C + C I+ +L+ + Sbjct: 293 PNPLSQIAKCKLCGSSMYYENKSKSLK-YLTCREFKKGSCTNKPIRIELIYRFVCEVFNS 351 Query: 360 NCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEV------TAIAEKIRLLDK 413 + + +N+ K+ EL+ K AL + T I E+I++ + Sbjct: 352 PMYYQYQAKLVEKSNKKDNNKLEELEAKQTEQENALRALLSMSNDFSNTIIQEEIKVRSE 411 Query: 414 ELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINT--DNKTCD 471 + ++ +K++ + I+ T +L EK+ + + + Sbjct: 412 RIESFKKHIENVKAEQAVEHTRSTHINFT--EALQLAVNAFRFPLEKVQVEELSREELFN 469 Query: 472 IYFMNGIVFKH 482 + KH Sbjct: 470 TRVRLNRILKH 480 >UniRef50_A5ZA26 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5ZA26_9FIRM Length = 516 Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats. Identities = 82/533 (15%), Positives = 181/533 (33%), Gaps = 75/533 (14%) Query: 2 KKAIAYMRFSSPGQ-------MSGDSLNRQRRLIAEWLKVNSDYYL-DTITYEDLGLSAF 53 K Y+R S + +S++ QR L+ +++ +S+ Y D G F Sbjct: 3 KITAMYIRLSMEDEDVSLNRKEESNSVSSQRELLKAYIENHSELKDTKVQEYCDDG---F 59 Query: 54 KGKHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVIT 113 G + +++ ++ I I + ++V+ L RL R+ + +++ + + VI Sbjct: 60 TGTKFERPGYTKLMEDIRAEKI---SCIVVKDLSRLGRDYIEVGSLLEQILPLYQVRVIA 116 Query: 114 LCDNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTAS 173 + DN D+ + + S S+++ + + + +G ++ Sbjct: 117 VNDNYDS--DNYDGSTGGMNVAFKNLIYMLYSRDLSNKICSAKHTR----ILNGENISGQ 170 Query: 174 CPRWLSLD-DKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESA- 231 D + + + DP+ + ++LIF+L + + +A YLN H + S + Sbjct: 171 LRYGYVKDPNDKHKIIVDPEAAEVVKLIFELTAQGKRKTEVANYLNAHGIDTPSAYKKRK 230 Query: 232 --------------WGPSVIEKLLANKALIGICVPSYRAR------------GKGISEIA 265 W S I +L ++ +G + + + I Sbjct: 231 GSKNFFHAVEVKSLWSTSSIRDILNDEVYLGKLIWNKTKKRVGSNNTSTYVPKDEWIVIE 290 Query: 266 GYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSL 325 + +I+ LF +N C CG + Sbjct: 291 NCHEPIITQKLFDMAHANSKKYIRPKRGKRNYNPFY------YCGVCGRAL--APSKRVK 342 Query: 326 HGYYVCPMRRLHR---CDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLE---- 378 +C R+ + C ++ V+ I+ + + + K A ++ E Sbjct: 343 GDILLCSSSRIEKNSPCKSNRVEIAKVEDAIMKIVNMYATAYLDEKGIKKAGKSKEVSPE 402 Query: 379 LKIIELQMKINN--------LIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGV 430 KI L+ K+ + ++ + + +++ ++ LK++ Sbjct: 403 EKIATLEKKVKSLSSKKMMLYSDYKDDKLTREEYVKRSKAMVEQIDELHQEIEQLKTEIP 462 Query: 431 ---NSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVF 480 NS S F + N R K +K+IIN ++ +I + F Sbjct: 463 PEDNSSSKFETQLESIINMESFDREKIQKVIKKVIINGED-NIEIVWNTDDPF 514 >UniRef50_A5CZZ6 Site-specific recombinases n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5CZZ6_PELTS Length = 516 Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats. Identities = 92/527 (17%), Positives = 179/527 (33%), Gaps = 82/527 (15%) Query: 3 KAIAYMRFSSPGQMS-GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 +A Y+R S+ Q G SL QR E + + + D G+S G+ Sbjct: 2 RAAIYLRVSTEDQAKHGYSLPDQRTACREKAAALGAG--EVMEFADEGIS---GELLDRP 56 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 S +A++ G + ++ DRL+R K+ + I G+ + + Sbjct: 57 GLSALREAVKAGQL---DLVVCFDPDRLAR-KLAHQLIITDEIEKAGVRLEFVN------ 106 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 + N P + L A E E R +K + G + A D Sbjct: 107 FEWQNTPDGRLFYALRGAIAEYEKEKIRERTVRGKLQKARLG---GLPVQADS-YGYIYD 162 Query: 182 DKRTAFVPDPDRVKTIELIFKLRM-ERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 + P P + +++IF+ E +N +A L++ + G+ AW V++ + Sbjct: 163 NGTVK--PHPVESEVVKMIFRWFTTEDIGVNGVAARLSEQGIPTRKGRP-AWQRCVVKTI 219 Query: 241 LANKALIGICVPSYR-------------------ARGKGISEIAGYYPRVISDDLFYAVQ 281 L N +G + R G IA P +I + + Q Sbjct: 220 LTNPMYVGTFYYNRRDCRGTCYNKHLPPEKRVKVKEKPGEEWIAVPVPAIIDRETWEKAQ 279 Query: 282 EIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIV---HAVSGSLHGYYVC----PMR 334 E A + + LL ++ C CGNTM GS Y C Sbjct: 280 EKIKAARRLWSGW--SREEYLLSGLISCADCGNTMHGAVKTKSGGSRERGYTCVKTAAGA 337 Query: 335 RLHRC-DRPSIKRDLVDYNII----------NELLFNCSKIQPVENKKDANETLELKIIE 383 C + ++V+ + + L + ++ + E +E + + Sbjct: 338 SNQGCRPIKRVPAEIVEKAVWDRVCEWLNDPDALAREIRERSREKDLRADLERIEKHLAD 397 Query: 384 LQMKINNLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTS 443 ++ +N+ AL+ + + EK L ++L+ L + K + + A+++ + Sbjct: 398 VEKGRDNIRSALAAG--LLDLDEKTSKLLRDLKGREKQLLSRKKEVEAALRRSAAVEVRA 455 Query: 444 KNGR---------------ELCRTLAYKTFEKIII--NTDNKTCDIY 473 + R E R L +++ + ++ +Y Sbjct: 456 REIRREAESFLSRLDFLSFEQKRALIRALVKQVTVAGRGESLRVTVY 502 >UniRef50_Q0T5X8 Hypothetical bacteriophage protein n=5 Tax=Enterobacteriaceae RepID=Q0T5X8_SHIF8 Length = 312 Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats. Identities = 135/313 (43%), Positives = 203/313 (64%), Gaps = 12/313 (3%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDT-ITYEDLGLSAFKGKHAQ 59 M++AI+Y+RFSS Q+ GDS+ RQ +L+ +WL N ++YLD+ ++++DLG SAF GKH + Sbjct: 3 MRRAISYIRFSSERQLKGDSVRRQSKLVTDWLDKNPEFYLDSSLSFKDLGKSAFSGKHLK 62 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 G +FL AIE G + G TLL+ESLDRLSR+ + A E L+ IL G+DV+TL D Sbjct: 63 -GGLGDFLTAIEKGLVKAGDTLLIESLDRLSRQDIDIASELLRRILRAGVDVVTLSDGEH 121 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 Y +SL +P +LIK+ILI QRA+EES KS RV+ +W +K ++ + G ++ CP WL Sbjct: 122 YTRESLKDPLALIKSILIMQRAHEESLRKSERVQAAWNRK-KELISEGIKVSRRCPAWLR 180 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKN---FSGKESAWGPSV 236 L+D R F PD+V+ ++ F LR++ S AI + LND + ++ K+ W + Sbjct: 181 LNDDRRTFTIIPDKVEVVKRAFDLRLQGLSFWAITRTLNDEGHLSLNQYTPKQKGWSDTA 240 Query: 237 IEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKN 296 ++KLL N+A+IG P+ R E+ GYYP +IS+ LFY VQ++ +G ++ S N Sbjct: 241 VKKLLRNRAVIGCFTPAGR------EEVQGYYPAIISESLFYRVQQLNTGQYGRASVSSN 294 Query: 297 PMLINLLRTVMKC 309 P+ +NL R ++KC Sbjct: 295 PLSVNLFRGIIKC 307 >UniRef50_C0ZFK2 Putative integrase n=2 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZFK2_BREBN Length = 546 Score = 289 bits (741), Expect = 1e-76, Method: Composition-based stats. Identities = 85/523 (16%), Positives = 176/523 (33%), Gaps = 78/523 (14%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 M + Y R SS Q ++ Q ++ ++ Y+D G++ Sbjct: 1 MLRLGIYARVSSDDQAERGTIENQLEFARKYADLHQLEI--VKWYKDDGVTG-TIPLEAR 57 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 A E L ++G I LL+ LDRL R + + + + G+ + ++ + Sbjct: 58 PAGRELLQDAKNGII---DLLLIYRLDRLGRS-ARIILNSVHELESDGVKIRSMTEPFDT 113 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 +P ++A A+ E E R+ A +G + P + Sbjct: 114 -----GDPSGRFLLTILAGVADLERETIIERLWYG----ANRAARAGKWLGGIVPYGYRV 164 Query: 181 DDKRT-----AFVPDPD--RVKTIELIFKLRM-ERRSLNAIAKYLNDHAVKNFSGKE--- 229 D +P+ D + LIF + + S ++ YLN V K+ Sbjct: 165 DSDGYLQICEDLLPNSDMTEAGVVRLIFHMLANQGHSCIKVSDYLNALGVPTAYAKDERK 224 Query: 230 -----------SAWGPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFY 278 W PS I ++ N + G+ R+ K I P ++ + + Sbjct: 225 ITRGKRKENTAGIWRPSRIRGIITNTSYKGVHFYGKRSTRKR-DVIEREVPAIVDVETWE 283 Query: 279 AVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLH---GYYVCPMRR 335 Q++ + +N LLR+++KC+ CG T + GS GYY C ++ Sbjct: 284 KAQKVL--RGNQIEAMRNIKNQYLLRSLLKCQCCGLTYVGIHYPGSKRALKGYYTCTGKQ 341 Query: 336 L------HRCDRPSIKRDLVDYNIINELLFNCS---------------KIQPVENKKDAN 374 +C ++ +D ++ + + L + K + + Sbjct: 342 AYKGPMQGKCTSKNLPQDWIEDLVWRDCLAFINQPGEALQEIAAAREVKQTEKVDLESEI 401 Query: 375 ETLELKIIELQMKINNLIVALSVAPEV-TAIAEKIRLLDKELRRASVSLKTL-------- 425 ++ I + ++ +++ + T + ++I+ +++E +K + Sbjct: 402 ALIQKSIDDKDVERQSILDLFRKSIITFTDLEKQIQKINQEKEILEQRIKEIRTSLQVDR 461 Query: 426 ----KSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIIN 464 K K L E R + +I ++ Sbjct: 462 DYSTKVKNAFQLLTSLRNKLDDNPSFETRREIVKTLVHRIQVH 504 >UniRef50_C2KNU9 Site-specific recombinase n=1 Tax=Mobiluncus mulieris ATCC 35243 RepID=C2KNU9_9ACTO Length = 416 Score = 289 bits (741), Expect = 1e-76, Method: Composition-based stats. Identities = 70/397 (17%), Positives = 142/397 (35%), Gaps = 40/397 (10%) Query: 4 AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAF 63 AY R S+ G SL+ Q + ++ + + D G++ K Sbjct: 20 VAAYARVSTNGTEQLASLSAQVSYYSRLIQSTPGWAYV-GVFTDEGITGTSTKS--RQGL 76 Query: 64 SEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNID 123 ++ +DA G + +L +S+ RL+R V + + ++ + + G+ V + ID Sbjct: 77 ADLMDAARRGGV---DIVLCKSISRLARNTV-DLLATVRELKDLGVAVRFERE----RID 128 Query: 124 SLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDK 183 +L+ L+ L+A A EES S VK + + + ++ + + D Sbjct: 129 TLSADGELLLT-LLASFAQEESRSLSHNVKWAIRNRYKNGGTN-----SFVVYGYHWTD- 181 Query: 184 RTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLAN 243 F + K + L+F ++ S A LN ++ G + SV ++L N Sbjct: 182 -GEFTIIDEEAKIVRLLFANYLDGISPEKTATMLNAEGKRSRGG--GRFYGSVFRRMLEN 238 Query: 244 KALIGICVPSYRARGKGISE-------------IAGYYPRVISDDLFYAVQEIRLAPFGI 290 + G + R + + P +I + +F AVQ + Sbjct: 239 ERYKGCQMLQKMYRPTIQAPTCSLNNGELPRYWVEQALPPIIDEAMFDAVQAEIAYRREV 298 Query: 291 SNSSKNPMLINLLRTVMKCEACGNTM---IVHAVSGSLHGYYVCPMR---RLHRCDRPSI 344 ++ + + C ACG SG+ + ++ C + C ++ Sbjct: 299 GPAATPSKNTGVFTGRICCAACGKNYQRKTRTYKSGTSYKFWRCWSACTGNGNPCRGHNL 358 Query: 345 KRDLVDYNIINELLFNCSKIQPVENKKDANETLELKI 381 + L++ + L V + E E ++ Sbjct: 359 RETLLEQACADMLGTQSFDPAAVAEQVVMIEAFEHQL 395 >UniRef50_C6JFP6 Recombinase n=2 Tax=Clostridiales RepID=C6JFP6_9FIRM Length = 531 Score = 289 bits (741), Expect = 1e-76, Method: Composition-based stats. Identities = 85/515 (16%), Positives = 161/515 (31%), Gaps = 65/515 (12%) Query: 4 AIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAF 63 AY R S+ +SL Q++ +E+ + D Y D G+S K K+ F Sbjct: 23 IAAYCRVSTDKADQLNSLEAQKQFFSEYTQRTGDNL--VRLYADEGISGTKIKN--RKEF 78 Query: 64 SEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNID 123 + EHG ++V+ + R +R V + ++ ++ + GI+ L N + Sbjct: 79 LRMMADAEHGL---FDMVVVKDISRFARNTV-DLLQNVRKLKALGIETQFLTANMTSMGN 134 Query: 124 SLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD-D 182 S + A EES S RVK K + + Sbjct: 135 S------EFVLTIFGALAQEESANTSKRVKFGKKMNAEKGRVPNIV------YGYDKTIG 182 Query: 183 KRTAFVPDPDRVKTIELIFKLRME-RRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLL 241 + + I I+K +E IA LN ++ W + ++L Sbjct: 183 DYFNLAINEEEAAVIRQIYKWYIEEGYGAAKIANMLNAKGIRTKR--NCQWSQNATCRIL 240 Query: 242 ANKALIGICVPSYR------------ARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFG 289 N+ G + + R+I +++ QEI Sbjct: 241 TNELYTGKIINGKQEVADFLTGQRTEKDETEWMVTERPELRIIEPEMYEKAQEILECRSK 300 Query: 290 ISNSSK-NPMLINLLRTVMKCEACGNTMIVHAVS-GSLHGYYVCPMRRLHRCDRPSIKRD 347 +K L T++KC+ CG + + + + +VC D + Sbjct: 301 TFKLTKERQSNKYLFSTLIKCKECGWSFRRTVRTYKNTYIRWVCSGHNGRGADSCPNAQT 360 Query: 348 LVDYNIINELLFNCSKIQPVENK---------------KDANETLELKIIELQMKINNLI 392 + + +I L S++ + KD N E ++ K+ + Sbjct: 361 VDEEELIEVLSEYFSELLKAKKNVIRHVTGEFQRVYKAKDENLNYEKELNAQLHKLKKMR 420 Query: 393 VAL-----SVAPEVTAIAEKIRLLDKELRRASVSLKTLK------SKGVNSFSDFYAIDL 441 + EKI +E+ R LK + + + + Sbjct: 421 QKYMDMYTDDLITREELNEKIGGTKQEIERLENELKMVAYHLTKGEQLETILNRTFKEIE 480 Query: 442 TSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMN 476 + ++ + +KI ++ D DIY Sbjct: 481 DISDVHQMTNAQLKRIIQKIEVDKDG-NVDIYLRI 514 >UniRef50_A3DG42 Recombinase n=7 Tax=root RepID=A3DG42_CLOTH Length = 442 Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats. Identities = 71/435 (16%), Positives = 151/435 (34%), Gaps = 46/435 (10%) Query: 6 AYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFSE 65 AY R S+ S Q ++ + DY Y D G+S K + F++ Sbjct: 3 AYCRVSTDQLEQLSSYEAQVAYYTSYITNHPDYEF-GGIYADEGISGTNTK--KREQFNK 59 Query: 66 FLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDSL 125 ++ + G I ++ +S+ R +R + + + ++ + GI VI +N I++L Sbjct: 60 MIEDCKAGKI---DMIITKSISRFARNTL-DTLNYVRQLKELGIGVIFEKEN----INTL 111 Query: 126 NEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDKRT 185 + ++ IL + A +ES S +++ + + + D++ Sbjct: 112 DSKGEVLLTIL-SSLAQDESRSISENSTWGIRRRFEQGK---LHINHTKFLGYDKDEEGN 167 Query: 186 AFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLANKA 245 V + + K + I+K ++ + N IA+ L + V N++GK W S I K+L+N+ Sbjct: 168 -LVINEKQAKIVRRIYKDYLDGKGANRIARELEEEGVPNWNGKP-KWYESSIRKILSNEK 225 Query: 246 LIGICVPSYRARGK-------------GISEIAGYYPRVISDDLFYAVQEIRLAPFGISN 292 G + + + +P +I +++ AVQ + Sbjct: 226 YKGDALLQKTYTVDFLTKKRAVNNGEVPMYYVEESHPAIIDKEIWEAVQLEMERRRAFAE 285 Query: 293 SSKNPMLIN-----LLRTVMKCEACGNTMIVHAVSGS----LHGYYVCPMRR----LHRC 339 L + C CG+ + + + C + C Sbjct: 286 KYNISKLDYATVDNPFAGRVICGHCGSAFGRKVWNSTDERLRRVVWRCNKKYEVKGKKSC 345 Query: 340 DRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLELKIIELQMK--INNLIVA-LS 396 + I ++ + +N + K + + + + I L A + Sbjct: 346 ENKHIDDKVLYHAFVNTFNAMVENKEYFMEKWKEGLKSDNLLKRYKARQFIEILKDAKIV 405 Query: 397 VAPEVTAIAEKIRLL 411 +V I + Sbjct: 406 EEFDVDMYFRIIEKM 420 >UniRef50_Q8LTD8 U153 integrase n=13 Tax=root RepID=Q8LTD8_9VIRU Length = 452 Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats. Identities = 87/486 (17%), Positives = 172/486 (35%), Gaps = 52/486 (10%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 KA Y+R S+ Q+ S+ Q + + + + D G + G + A Sbjct: 2 KAAIYIRVSTQEQIENYSIQAQTEKLTALCRSKD--WDVYDIFIDGG---YSGSNMNRPA 56 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 +E L + ++V LDRLSR + + L + ++ ++L + + Sbjct: 57 LNEMLS-----KLHEIDAVVVYRLDRLSRSQRDTITLIEEYFLKNNVEFVSLSETLDTS- 110 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 P+ +++ A E E R+ + + + L T + + D Sbjct: 111 ----SPFGRAMIGILSVFAQLERETIRDRMVMGKIXRIEAGLPLTTAKGRT--FGYDVID 164 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 + + + K +++I+ + E +S+ + K L K S L Sbjct: 165 TK--LYINEEEAKQLQMIYDIFEEEKSITTLQKRLKKLGFKVK-------SYSSYNNWLT 215 Query: 243 NKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINL 302 N G + + K G + +IS++ FY VQEI N + N +L Sbjct: 216 NDLYCGYVSYADKVHTK------GVHEPIISEEQFYRVQEIFS--RMGKNPNMNRDSASL 267 Query: 303 LRTVMKCEACGNTMIVHAV------SGSLHGYYVCPMRRL----HRCDRPSIKRDLVDYN 352 L ++ C CG + + YY C + +C + D ++ Sbjct: 268 LNNLVVCGKCGLGFVHRRKDTVSRGKKYHYRYYSCKTYKHTHELEKCGNKIWRADKLEEL 327 Query: 353 IINELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAP-EVTAIAEKIRLL 411 II+ + N S +K+D ++L K+ +K L EV+ + + + Sbjct: 328 IIDRV-NNYSFASRNVDKEDELDSLNEKLKTEHVKKKRLFDLYISGSYEVSELDAMMADI 386 Query: 412 DKELRRASVSLKTLKS-----KGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTD 466 D ++ ++ + K + +D +D S RE + KI I+ + Sbjct: 387 DAQINYYEAQIEANEELKKNKKIQENLADLATVDFDSLEFRE-KQLYLKSLINKIYIDGE 445 Query: 467 NKTCDI 472 T + Sbjct: 446 QVTIEW 451 >UniRef50_Q187L8 Site-specific recombinases n=6 Tax=Clostridium difficile RepID=Q187L8_CLOD6 Length = 532 Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats. Identities = 98/547 (17%), Positives = 193/547 (35%), Gaps = 94/547 (17%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 KA Y R S GDS+ Q +L ++ K D + YED G F G + Sbjct: 2 KAAIYSRKSRFTG-KGDSIENQIQLCIDYAKSIG--VKDFLIYEDEG---FSGSNIDRPQ 55 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F + + + + L+ LDR+SR V + ++ + I I++ + + Sbjct: 56 FKKMMQDAKDKK---FSYLVCYRLDRISRN-VSDFSTLIEKLNELNISFISIKEQFDTST 111 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 P + + A E E + R+K + + + SG + + P + + Sbjct: 112 -----PMGRAMMFISSVFAQLERETIAERIKDNMYELAR----SGRWLGGNTPHGFNSEK 162 Query: 183 KR-----------TAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESA 231 + ++++ ++LI+ +E RSL+ + KY+ ++ ++ G Sbjct: 163 ITFLDENLKERSMYKLQVNDEQMEIVKLIYNKYLELRSLSKLYKYVYNNGIRGPRG--GK 220 Query: 232 WGPSVIEKLLANKAL-------------------------IGICVPSYRARGKGISEIAG 266 + PS + ++L N A GI + + Sbjct: 221 FDPSSLSRILRNPAYVKANDEILDYLKNSGMDVVGTPDRKCGILTYAKNTSNSIAAIAK- 279 Query: 267 YYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSL- 325 + VI +++ VQ + LL ++KC CG+ M + Sbjct: 280 -HHGVIEPEIWLEVQNQLDKNRDKTPRISTGKTA-LLSGLIKCGKCGSNMRITYKGKKTD 337 Query: 326 ---HGYYVCPMRRLHR---CDRPSIKRDLVDYNIINELL-------------FNCSKIQP 366 YY+C ++ C+ ++ LV+ +I+++ N Sbjct: 338 KDLKYYYICGTKKTLGSDSCNCKNLNGPLVESLVIDKIKNCKEESIISAFNSNNIKTDNV 397 Query: 367 VENKKDANETLELKIIELQMKINNLIVALSV---APEVTAIAEKIRLLDKELRRASVSLK 423 K L+ +I++ + I NL++ L+ + I +I L+ E+ + Sbjct: 398 FNIFKSETNLLKNQILDKERLIKNLVIELAKNTGSTASDYIVSQIESLNNEISILKDKIN 457 Query: 424 TLKSKGVNSFSDFYAIDLTSKNGREL-----------CRTLAYKTFEKIIINTDNKTCDI 472 TL+S +N SD ID+ N + R L I+ ++ +I Sbjct: 458 TLESGNINISSDSINIDIIVSNLKRFNDEVDNASLDDKRLLLSTIINSIVWDSSLGNLNI 517 Query: 473 YFMNGIV 479 +M V Sbjct: 518 VYMGAEV 524 >UniRef50_C7H9D9 TnpX site-specific recombinase n=5 Tax=Bacteria RepID=C7H9D9_9FIRM Length = 598 Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats. Identities = 78/519 (15%), Positives = 156/519 (30%), Gaps = 84/519 (16%) Query: 4 AIAYMRFSSPG--QMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 A Y R S + S+ Q++L+ + K Y + + + D G+S Sbjct: 47 AFLYERLSRDDNLEGESYSIGNQKKLLTKVAKEKG--YTNLVHFLDDGISGVT---MNRP 101 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F E + +E G + + V+ L RL R + + +H I ++ + DN Sbjct: 102 GFVEMMQQLEQGK---ASAVFVKDLSRLGRNYIEVGRLTEEFFPDHDIRLVAVSDNID-- 156 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 A + + S + ++S K K SG M P D Sbjct: 157 ----TAEGENELAPIRNLFNEWYARDISKKRRISNKIK----GNSGEPM-GLPPYGYIKD 207 Query: 182 DKR-TAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNF--------------- 225 ++ D + + + IF + +E IA + Sbjct: 208 PNNPKHWIIDEEAAQVVRRIFDMTLEGFGTEQIATQFEKEGILTPQAYWIQKGIGRPGKA 267 Query: 226 -SGKESAWGPSVIEKLLANKALIGICVPSYRARG------------KGISEIAGYYPRVI 272 + + W S I LL + G + + + +I Sbjct: 268 KTRPATKWNGSTITHLLYQQEYCGDVLNFKTYSKSYKNKKRIHNDPENWVVFQNVHEPII 327 Query: 273 SDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVH-AVSGSLHGYYVC 331 +F VQ+ + + N+ ++ C CG + H Y+ C Sbjct: 328 ERAVFEQVQQ---KRGKMRKRRTSNGEHNMFSGLLVCADCGCNLHFHFNQGNPEIKYFNC 384 Query: 332 PMRRLHR--CDR-PSIKRDLVDYNIINELLFNCSKIQPVEN-------------KKDANE 375 + +R C I+ D ++ ++ E+ E+ + + Sbjct: 385 SNYKGNRGTCQSTHYIRVDFLEEVVLGEIRRLTKFASLYEDDFLKAIIGHSQQADEADRK 444 Query: 376 TLELKIIEL---QMKINNLIVAL-----SVAPEVTAIAEKIRLLDKELRRASVSLKTLKS 427 E ++ L +++ L + S + R + E + + +K L+S Sbjct: 445 LKEKELKALLARDEELDGLFERIYEDNVSGKISDERFSRMSRRYEDEQKELTEKIKQLRS 504 Query: 428 KGVNSFSDFYAIDLTSKNGRELCRT------LAYKTFEK 460 + S D+ R+ R + + K Sbjct: 505 EIEKQSSRTMTTDMFISLVRKYTRAKKLTPRMLNELVGK 543 >UniRef50_Q1DB40 Site-specific recombinase, resolvase family n=4 Tax=Cystobacterineae RepID=Q1DB40_MYXXD Length = 515 Score = 288 bits (739), Expect = 2e-76, Method: Composition-based stats. Identities = 83/515 (16%), Positives = 169/515 (32%), Gaps = 71/515 (13%) Query: 2 KKAIAYMRFSSPG--QMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 K+ Y R S+ +M +SL+ QR +++ + L +Y+D G F G + + Sbjct: 12 KRCAVYTRKSTAAGLEMEFNSLDAQRESCVAYVQRQPGWVLVEESYDDGG---FTGANME 68 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 AF L ++ + V+ L R + + + ++ G +++ N Sbjct: 69 RPAFQRLLQDVDARRVDVVVVYKVDRLSR----SLLDFAKVMERFNAAGASFVSVTQNF- 123 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 S + + ++ A E E+ S R + R+ G P Sbjct: 124 ----STADAMGRLTLNMLMSFAEFEREMISERTRDKVAAARRK----GKWTGGRAPLGYE 175 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFS--------GKESA 231 + DKR V + + F+L ++ + +A+A+ LN+ Sbjct: 176 VKDKR--LVVNEYEAVVVREAFELYLQHQQASAVARLLNETGRTTKRYEAQSGATRAARK 233 Query: 232 WGPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGIS 291 W + +LL + G G +P ++ F+ VQ++ + Sbjct: 234 WTTQDVLRLLRSPLYAGFVPYGDETH-------PGEHPALVDRATFHRVQDMLES---PG 283 Query: 292 NSSKNPMLINLLRTVMKCEACGNTMI-VHAVSG-SLHGYYVCPMRRLH---RCDRPSIKR 346 +LR +++C CG M G + YY C R C + Sbjct: 284 IQYHGRNPDYVLRGLLRCGLCGEAMTPGSTRKGEREYRYYRCVTRDKQGKEGCRAAPLPA 343 Query: 347 DLVDYNIINELLF-NCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVA------- 398 ++ ++ +L + + LE K L+ + L L+ Sbjct: 344 AALEDFVVAQLREVSVGDGFAAQVHARLTARLEEKHQALRAERAQLPRDLAKRAGESAKW 403 Query: 399 ----------------PEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLT 442 ++TA E++ + K L +L ++ + V + A+ Sbjct: 404 VDSLSKLEGPARRLVEEKLTAAEEEVAGMRKRLAEVERALDAIEGERVEAAWVAQALGNF 463 Query: 443 SKNGRELCRT----LAYKTFEKIIINTDNKTCDIY 473 L T L ++++N D++ Sbjct: 464 DAVWDALTSTNRGRLLRALVGRVVVNEATGKVDVH 498 >UniRef50_C5UY92 Resolvase n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UY92_CLOBO Length = 559 Score = 288 bits (739), Expect = 2e-76, Method: Composition-based stats. Identities = 109/547 (19%), Positives = 197/547 (36%), Gaps = 93/547 (17%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVN-SDYYLDTITYEDLGLSAFKGKHAQSG 61 K Y R S G+S+ Q +L E+ ++ + L+ I YED G F GK+ + Sbjct: 2 KIAIYSRKSIFTG-KGESIENQIKLCKEYCDIHYKNENLEYIIYEDEG---FSGKNIKRP 57 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 F L+ ++ I L+ LDR+SR V + L+L+ + +D I++ + + Sbjct: 58 QFQNLLNDVKSKQI---NILICYRLDRISRN-VADFSSILELLEKYNVDFISINERFDTS 113 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 P + + A E E + RVK + + + SG P + + Sbjct: 114 T-----PTGRAMVYISSVFAQLERETIAERVKDNMIQLAKMGKWSG----GQLPLGYTSE 164 Query: 182 DKRT-----------AFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKES 230 VP + + TI+ I+ + + S+ + K LN H K +G + Sbjct: 165 KVHYMNEEMKEKTFIKLVPVDNELDTIQFIYNNFLTKGSILNVTKELNSHGYKTKTGID- 223 Query: 231 AWGPSVIEKLLANKALI------------------------GICVPSYRARGKGISEIAG 266 + + ++++L + + G + R I Sbjct: 224 -FEITGVKRILRSALYVKSSEFVHEYLKSKKYNVFGEANGNGYLGYNKRTDKDNIIIAVS 282 Query: 267 YYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLI----NLLRTVMKCEACGNTMI----V 318 + VIS + +VQ+ A S + N L ++KC CG+ M+ Sbjct: 283 NHKAVISSTDWLSVQKKLDANIKRSKETSNRNGTGCNDTLFSGLLKCGKCGSNMVIKYNG 342 Query: 319 HAVSGSLHGYYVCPMRRLH----RCDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDAN 374 G + YY C + RCD P+++ DLVD I+N + I E K + Sbjct: 343 KNKDGISYIYYTCSNKEKKYLTNRCDIPNLRSDLVDPIIVNNIKIYNKDILIKEYKNKLS 402 Query: 375 ETLEL-----------KIIELQMKINNLIVALSVAPEVTA---IAEKIRLLDKELRRASV 420 E LE +I + + + NL+ LS +I + KE+ + Sbjct: 403 ELLENSDKQIINDLKSQINDKEKQARNLVTELSKTESEDVKVLYRAQIDEIIKEINKLKS 462 Query: 421 SLKTLKSKGVNSFSDFYAIDLTSKNGREL------------CRTLAYKTFEKIIINTDNK 468 + + + + I ++ + RTL EK+ + D K Sbjct: 463 IISSSEETQLQLKDTIMNIKHLIQSFIDFNNYFDNAIDINIKRTLLRNIVEKVTYDADKK 522 Query: 469 TCDIYFM 475 ++ F Sbjct: 523 DFNVNFF 529 >UniRef50_A5D4E3 Site-specific recombinases n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D4E3_PELTS Length = 533 Score = 288 bits (739), Expect = 3e-76, Method: Composition-based stats. Identities = 84/527 (15%), Positives = 157/527 (29%), Gaps = 83/527 (15%) Query: 1 MKKAIAYMRFSSPGQMS-GDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQ 59 M A+ Y+R S+ Q G S+ QR + + + I + D G+S G + Sbjct: 1 MSAALIYLRVSTEEQAERGYSIAAQREECRARAQESGA--TEIIEFVDEGVS---GSILE 55 Query: 60 SGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTV 119 A L+ ++ G I L RLSR V + + I G ++I + Sbjct: 56 RPALVAALEKLKAGGIRWFICL---DTSRLSRS-VAHQLLLIDEIKKAGTELIFVNSRF- 110 Query: 120 YNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLS 179 + P +++ E R + + K + G + + Sbjct: 111 -----TDTPEDRFHLTVLSAVDEYERARTRLRSLIGKRAKAKA----GKLTHSPGLYGYE 161 Query: 180 LDDKRTAFVPDPDRVKTIELIFKLRMERR--SLNAIAKYLNDHAVKNFSGKESAWGPSVI 237 D + + K I L+++ S IA LN + + GK W + Sbjct: 162 FDKETDTLRIIEEEAKIIRLMYQWFASGEDASPYKIANRLNAMGIPSPRGK--RWSKQTV 219 Query: 238 EKLLANKALIGICVPSY-------------------RARGKGISEIAGYYPRVISDDLFY 278 +++LAN A G S R + P ++ + Sbjct: 220 KRILANSAYAGTLYISRYDTKDVKFNKYKPPEERVSRKERPREEWVPISVPAIVDKQTWE 279 Query: 279 AVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVH--AVSGSLHGYYVCPMRR- 335 A Q+ S LL +M+C CG TM + G YYVC + Sbjct: 280 AAQKRFENSRRRWRSF--STYPYLLSGLMRCGKCGATMHGNLVTSKGKKRAYYVCTAKSP 337 Query: 336 ----LHRCDRPSIKRDLVDYNIINELL------FNCSKIQPVENKKDANETLELKIIELQ 385 C + ++ I ++ + + LE ++ ++ Sbjct: 338 GLPGRQHCQSSYLNAAEIEEVIWQKVSAWLTNPEKLRTELQAAFPDETAQALETELDAVE 397 Query: 386 MKINNLIVALSVAPEVTAIAEK----IRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDL 441 + L+ A V + +K +++ L L + + DL Sbjct: 398 KE---LVRAYEERSRVATMFQKGFIPEAEMEERLGEIKGRRDYLSRRREQILGELSRCDL 454 Query: 442 TSKNGR------------------ELCRTLAYKTFEKIIINTDNKTC 470 ++ + E + L +I + Sbjct: 455 AARELKRLEELAAGMGNALDSLSSEEKKCLINLLIAEIAVFGRRADI 501 >UniRef50_A6P2T0 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P2T0_9BACE Length = 401 Score = 288 bits (739), Expect = 3e-76, Method: Composition-based stats. Identities = 73/364 (20%), Positives = 134/364 (36%), Gaps = 40/364 (10%) Query: 3 KAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGA 62 + AY R SS +S Q R ++ + ++ + Y D G++ + + Sbjct: 35 RVAAYARVSSASDDQLNSFAAQNRHYSDLISSKENWRMVD-IYADEGITGTSAE--KRED 91 Query: 63 FSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNI 122 F L G I +LV+S+ R +R E +E ++ + + G+ V +N Sbjct: 92 FQRLLADCRRGLI---DRVLVKSISRFARNT-KECLETIRELKSLGVGVYFEKENIDTAT 147 Query: 123 DSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDD 182 + L A A ESE S ++ +K+ Q GT + A+ P +L D Sbjct: 148 -----MSGEMMTALFASFAQAESESISGNMRWGIQKRMQA----GTYIPANLPYGYTLQD 198 Query: 183 KRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLA 242 + ++ ++ IFK + +S IA L + + SG E AW + I +++ Sbjct: 199 --HSIRIVEEQAVIVQRIFKEYLSGKSTERIASDLREEGIPCKSG-EVAWDSTAIRYIIS 255 Query: 243 NKALIGICVPSY---------RARGKGISEIA----GYYPRVISDDLFYAVQEIRLAPFG 289 N+ IG V + R +++ G + ++ + F + + Sbjct: 256 NEKYIGDSVWQKYFSTDTLPYKCRLNRGQKVSYYAYGTHEGIVPKEDFEKANALMKSRAQ 315 Query: 290 ISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLH----RCDRPSIK 345 +KN R + C C + V G Y+VC +C I Sbjct: 316 KITLTKNS--PYAFRKKIVCGDCQSLFRRKVVRGIT--YWVCIGHDKKRHGLKCGITPIA 371 Query: 346 RDLV 349 D + Sbjct: 372 EDEI 375 >UniRef50_C5VNM7 Site-specific recombinase, resolvase family n=1 Tax=Clostridium botulinum D str. 1873 RepID=C5VNM7_CLOBO Length = 528 Score = 288 bits (737), Expect = 4e-76, Method: Composition-based stats. Identities = 100/541 (18%), Positives = 178/541 (32%), Gaps = 83/541 (15%) Query: 1 MKKA---IAYMRFSSPGQMSGDSLNRQRRLIAEWL-----KVNSDYYLDTITYEDLGLSA 52 MKK Y R S+ + +S+ Q + + +WL Y Y+D G Sbjct: 1 MKKVWNVAIYTRVSTDKKEQSESIPAQIQSLKKWLIEKSSNDKEQIYKLQQIYKDQG--- 57 Query: 53 FKGKHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVI 112 F G + + +F + IE+G I +L L R +R + N G+ + Sbjct: 58 FSGSNFKRESFIKMKKDIENGKI---NMVLTRDLSRFARNYITAGYYLEDYFKNKGVRFV 114 Query: 113 TLCDNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTA 172 ++ DN ID +++ + S R + K++ G+ + + Sbjct: 115 SVLDNVD-TIDEVDD-----IVPFKNILNEMYIKDCSRRTRDGLKQRMIR----GSSIAS 164 Query: 173 SCPRWLSLDDKRT------AFVPDPDR-VKTIELIFKLRMERRSLNAIAKYLNDHAVKNF 225 + +P D K ++ IF+L ++ + IA YLND + Sbjct: 165 RPLYGYKFHEVHDENVKIIKLIPREDETTKVVKKIFELYIQGFGMGRIATYLNDKGIAPP 224 Query: 226 --------SGKESAWGPSVIEKLLANKALIGICVPSYRARG-----------KGISEIAG 266 K W + I +L N GI V + K I G Sbjct: 225 SALIKNFSRSKFKLWNNNTIRSILTNPKYAGIMVQGRWRKVSYKINKVRPTPKDQWIIGG 284 Query: 267 YYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLH 326 + ++S + F VQE+ +L V+KC CG +M Sbjct: 285 EFKGIVSKETFEIVQELIKKRSKGFRHKGG--NTHLFSGVLKCNECGGSMSYRGDFKG-- 340 Query: 327 GYYVCPMR--RLHRCDRPSIKRDLVDYNIINELLFNCSKIQPVEN-------KKDANETL 377 Y C RC SIK + + I ++ N K+ +N K N Sbjct: 341 --YKCTNSQMGGGRCIAHSIKEEYLIKKIKEDIKRNIYKLNNKKNFYNLAELKVKKNSDY 398 Query: 378 ELKIIELQMKINNLI--------VALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSK- 428 + K+ ++ ++ L LS I +D + +R K +++ Sbjct: 399 KRKLKDIDKELQILDSKFQRIYFDNLSGIINERNFKSLIACIDNQQQRLISKRKDIENLY 458 Query: 429 -----GVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTD----NKTCDIYFMNGIV 479 + + N E+ R + +KII++ + K D+Y+ Sbjct: 459 LNYNYKEKIYCQYKIQIDKILNFEEIDRFIIESLIDKIIVSENKITKKKNIDVYYKFKEP 518 Query: 480 F 480 Sbjct: 519 I 519 >UniRef50_Q0TMZ4 Site-specific recombinase, resolvase family n=2 Tax=Clostridium perfringens RepID=Q0TMZ4_CLOP1 Length = 534 Score = 288 bits (737), Expect = 4e-76, Method: Composition-based stats. Identities = 106/554 (19%), Positives = 198/554 (35%), Gaps = 100/554 (18%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 MK A Y R S + GDS+ Q +L +LK + +T+ Y D G F GK+ + Sbjct: 1 MKTAAIYARRSKVVET-GDSIENQIQLCTNYLK--NIGINNTLIYSDEG---FSGKNTER 54 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 F ++ + TL+ +DRLSR +G+ + + + I I++ + Sbjct: 55 PGFVRLMNDAKQKK---FDTLVCYKVDRLSRN-IGDFSNLINELEKNEISFISVIEQFDT 110 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 + + + E E S RV + +G + P S Sbjct: 111 R-----AAMGKAMMYICSVFSQLERETISQRVCDNMYSLA----TNGYWLGGEFPFGFSS 161 Query: 181 DDKR-----------TAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKE 229 K + +P + ++LIF +E SL+ + KYL + +K GK+ Sbjct: 162 SRKNFTDSSGKNRSYSELIPIEKEINLVKLIFNKYIELGSLSQVEKYLLQNNIKTRRGKD 221 Query: 230 SAWGPSVIEKLLANKALI-------------------------GICVPSYRARGKGISEI 264 W + I+ +++N + GI + R G Sbjct: 222 --WSKASIKNIISNPVYVKANDKTIEYFKSQGIKTYGEPDDIHGILIYKKRKGKSGKIRN 279 Query: 265 AG-------YYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMI 317 + +I D + VQ+I + + + LL +++C CG++M Sbjct: 280 PDEWIYAVSTHEGIIDSDSWLEVQKIAEINKYKAPALGSS-HKALLSGIIRCAQCGSSMR 338 Query: 318 VHAV-----SGSLHGYYVCPMRRLHR---CDRPSIKRDLVDYNIINELLF-NCSKIQPVE 368 V + YY+C ++ C ++ VD +IN+L + K V+ Sbjct: 339 VSYGVPNKLTKKRKHYYMCTLKHNSGKVRCASKNVDGPEVDKLVINKLKELSLDKSYLVQ 398 Query: 369 NKKDANET------------LELKIIELQMKINNLIVALSVAPE----------VTAIAE 406 KD E+ ++ +I + + +I+NL+ +++ + +T + Sbjct: 399 RLKDYKESFATSSENILSKNIQNEISKNKEQIDNLVNNITLTEDPQLVQILLDKLTKLKS 458 Query: 407 KIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGREL----CRTLAYKTFEKII 462 K L L + + L N + + S +L RTL +K+ Sbjct: 459 KSVELTNSLNKLNDELAKQDILINNCDNIIQKLKNLSALIDDLDVPQKRTLLSSVIDKVF 518 Query: 463 INTDNKTCDIYFMN 476 +N D I F + Sbjct: 519 VNGDTGAVKIKFKS 532 >UniRef50_A8RUP3 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RUP3_9CLOT Length = 528 Score = 288 bits (737), Expect = 4e-76, Method: Composition-based stats. Identities = 93/513 (18%), Positives = 170/513 (33%), Gaps = 59/513 (11%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 MK AY R S+ S Q ++ +D+ Y D G S K K Sbjct: 23 MKNVCAYCRVSTNIPHQKGSYESQLEYYENMIRSKADWNFV-GIYADYGKSGTKEKG--R 79 Query: 61 GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVY 120 F L+ E G I + +S+ R +R V I+ ++ + IDV + Sbjct: 80 TDFMRMLEDCEAGEI---DIICTKSISRFARNTVE-CIQVVRKLKEMHIDVYFEKERIHT 135 Query: 121 NIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSL 180 + + + + A ESE SS K S +K+ +GT + + Sbjct: 136 LPEKS-----ELLLSIYSSVAQAESESISSNQKWSIQKRFL----NGTYILPNPAYGYCT 186 Query: 181 DDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 + D + + IF +E + IAK LN+ + +GK AW I + Sbjct: 187 NA-NGLLELDQKQAAVVRFIFDEYLEGNGIWRIAKSLNEQKIPTKTGKA-AWLGGAIYII 244 Query: 241 LANKALIG----------ICVPSYRARGKGISE---IAGYYPRVISDDLFYAVQEIRLAP 287 L N G VP R + G I + +++ + + AVQ + Sbjct: 245 LKNSVYTGDLLLQKTYSEDIVPFVRRKNNGEYRQVLIENDHEPIVTHEEYEAVQRMLKQK 304 Query: 288 FGISNSSKNPM--LINLLRTVMKCEACGNTMIVHAVSGSL---HGYYVCPMRRLHR--CD 340 + + K + + + C CG++ G + + C R + C+ Sbjct: 305 AKVKKAGKEEQLEEHSEFKGKVICGICGSSYNRQVKKGRTGKSNITWSCARRIQTKDLCE 364 Query: 341 RPSIKRDLVDYNIIN--------------ELLFNCSKIQPVENKKDANETLELKIIELQM 386 IK ++ I L+ ++ + E L+ +I E + Sbjct: 365 NDIIKESQLEQLFITMWNKLSNHCDEILVALMKELEHLKATPMIQKQLEQLDKRIQEQKK 424 Query: 387 KINNLIVALS-VAPEVTAIAEKIRLLDKELRRASVSLKT-----LKSKGVNSFSDFYAID 440 + L S + E+ ++ K L+ + + K + + Sbjct: 425 QREILNHLASGEMIDSAFYMEQQNMISKNLKEYQREKEQYLQKSRQRKELIQTKELIKQF 484 Query: 441 LTSKNGRE-LCRTLAYKTFEKIIINTDNKTCDI 472 E +TL +KII+N + ++ Sbjct: 485 KKGPQYLEVYDKTLFQAIVKKIIVNPNELVFEL 517 >UniRef50_Q3KAI6 Putative integrase/recombinase n=1 Tax=Pseudomonas fluorescens Pf0-1 RepID=Q3KAI6_PSEPF Length = 532 Score = 287 bits (736), Expect = 5e-76, Method: Composition-based stats. Identities = 121/513 (23%), Positives = 218/513 (42%), Gaps = 29/513 (5%) Query: 1 MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQS 60 MK+AI+Y+RFSS Q G S+ RQ +IA+WLK + DY + + + DLG S + G+H + Sbjct: 1 MKQAISYVRFSSDRQRHGSSVERQEGMIADWLKRHPDYEMSDLKFSDLGKSGYHGEHIKE 60 Query: 61 -GAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIER-LKLILNHGIDVITLCDNT 118 G F + L A+E G+I G +LVE++DR R + + + + IL G+ +ITL DNT Sbjct: 61 AGGFGKLLKALEDGFIRAGDVVLVEAIDRTGRLEPMDMLTLVINPILKAGVSIITLDDNT 120 Query: 119 VYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWL 178 Y+ +S+N + + Q A+ S S+RV S+KK+R+DA + G + P WL Sbjct: 121 TYSKESVNTA-QIFLLVAKIQAAHGYSAALSTRVADSYKKRRKDAAKYGIVPRRITPVWL 179 Query: 179 SLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIE 238 + D D I+ F+L + + IAK + + V+ + +E Sbjct: 180 NPDG-----TVREDVAPWIKTAFELYVSGVGKSTIAKRMRESGVERLAKASGP----GVE 230 Query: 239 KLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPM 298 L NKA+IG I YP +I LFY Q + Sbjct: 231 GWLRNKAVIGK--WETLEGTPDHQIIDDIYPAIIEPSLFYKAQVHAE---KMKTQRPIKT 285 Query: 299 LINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDR-PSIKRDLVDYNI---- 353 + L +++C CG IV + G H + + C + + ++D Sbjct: 286 ASHFLVGLVRCGECGKNYIVQNLHGKPHSMRCRTRQSQNECTNSHCVPKPVLDAIYRYTS 345 Query: 354 INELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTAIAEKIRLLDK 413 + + + Q N K+ E +++ + +++ L+ AL+ + + E ++ Sbjct: 346 VTAAIEAVQQQQMGVNDKEIVTR-EAELLAITKRVDGLVQALTQTGPIPEVIEALKQSRI 404 Query: 414 ELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFE----KIIINTDNKT 469 E A +L L+S V S + + I + + Sbjct: 405 EREAAESALVILRSTVVPSAGTHWQEMGKVWKLEAADAQRLAAMLKLVDYHITVAPTGEI 464 Query: 470 CDIYFMNGIVFKHYPLMKVISAQQAISALKYMV 502 + +++++ + + + + ++ K M+ Sbjct: 465 TAS--HSEVLYRYIGVDRALDKYKLLANGKLML 495 >UniRef50_A5D367 Putative uncharacterized protein n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D367_PELTS Length = 502 Score = 287 bits (736), Expect = 5e-76, Method: Composition-based stats. Identities = 85/500 (17%), Positives = 153/500 (30%), Gaps = 65/500 (13%) Query: 3 KAIAYMRFSSPGQM-SGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSG 61 +A Y+R S+ Q G SL Q+ + + + D G+S G Sbjct: 2 RAAVYVRVSTEDQARHGYSLQEQKEACR--CRAVDLGAKTVLEFADEGVS---GATLDRP 56 Query: 62 AFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYN 121 + I G I ++V DRLSR K+ + + I G+ + L + Sbjct: 57 GLQGLRELIRSGQI---DLVVVRDPDRLSR-KLSHQLILTEEIEKAGVRLEFL------D 106 Query: 122 IDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLD 181 D + P + + A E E R+ +K + G + + Sbjct: 107 FDWKDTPDGRLFYAIRGAIAEFEKEKIRERMARGKTQKAKQ----GGMPIGFYNYGYVYE 162 Query: 182 DKRTAFVPDPDRVKTIELIFKLRM-ERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKL 240 + K +E IFK + E +N +AK LN+ V + GK W V+ ++ Sbjct: 163 PETGKVRLHETEAKVVEEIFKWFVQEDIGINGVAKRLNEAEVPSRKGK--RWHKQVVRQV 220 Query: 241 LANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLI 300 L N G I P +I + ++ QE + + Sbjct: 221 LVNPVYKGTWQYK-------DICIP--VPAIIDEAVWLKAQEKIRGARRLWAGQR--KHD 269 Query: 301 NLLRTVMKCEACGNTMIVHAVS--GSLHGYYVC----PMRRLHRC-DRPSIKRDLVDYNI 353 LL ++ C CG TM Y C R C + V+ + Sbjct: 270 YLLSGIVTCGECGQTMTGVYSKWWNKKDRRYTCFKGYQGARHRGCLPSKYVLAGYVESAV 329 Query: 354 INELLFNCSKIQPVENKK-----------DANETLELKIIELQMKINNLIVALSVAPE-- 400 ++ + ++ E E + E++ ++ AL+ Sbjct: 330 WEQVKDWLQDPGALASEAYASSPRVEDYLKELERTEKLLSEVEKGREAVLDALASGLFEL 389 Query: 401 VTAIAEKIRLLDKELRRASVSLKTL------KSKGVNSFSDFYAIDLT-----SKNGREL 449 K+ L + R K L S V + A+ + Sbjct: 390 DARTKAKLADLKRRKERLEQRKKELVLTVRGASGAVARMDELRALASEVLGRIDELDFSE 449 Query: 450 CRTLAYKTFEKIIINTDNKT 469 + L +++++ K Sbjct: 450 KKALVRALVAQVVVSGKGKR 469 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.314 0.163 0.485 Lambda K H 0.267 0.0498 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,980,798,099 Number of Sequences: 3077464 Number of extensions: 138514976 Number of successful extensions: 776143 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 2991 Number of HSP's successfully gapped in prelim test: 8362 Number of HSP's that attempted gapping in prelim test: 685035 Number of HSP's gapped (non-prelim): 62273 length of query: 508 length of database: 1,040,396,356 effective HSP length: 133 effective length of query: 375 effective length of database: 631,093,644 effective search space: 236660116500 effective search space used: 236660116500 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 96 (41.3 bits)