Phyre 2 alignment of P50465 with c1x6aA_

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Job Description | P50465
Confidence | 28.70% | Date | Thu Jan 5 12:04:46 GMT 2012
Rank | 120 | Aligned Residues | 41
% Identity | 20% | Template | c1x6aA_
PDB info | PDB header:protein binding | Chain: A: PDB Molecule:lim domain kinase 2; | PDBTitle: solution structures of the second lim domain of human lim-2 kinase 2 (limk2)
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 214 | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | G | Q | V | D | E | N | K | H | H | G | A | L | F | R | F | K | V | F | H | R | D | G | E | P | C | E | R | C | G | S | I | I | E | K | T | T | L | S | S | R | P | F | Y | W | C | P | G | C
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | G | S | S | G | S | S | G | K | D | . | . | . | . | . | Y | W | . | . | G | K | F | G | E | F | C | H | G | C | S | L | L | M | T | G | P | F | M | V | A | G | E | F | K | Y | H | P | E | C
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | S | S | . | . |  |  | S | S |  | B |  | T | T | T |  |  | B |  |  | S |  |  | B |  |  | T | T |  |  | B |  | T | T | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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