Phyre 2 alignment of P50465 with c2riqA_

Return to main results | Retrieve Phyre Job Id

Job Description | P50465
Confidence | 50.66% | Date | Thu Jan 5 12:04:46 GMT 2012
Rank | 79 | Aligned Residues | 53
% Identity | 25% | Template | c2riqA_
PDB info | PDB header:transferase | Chain: A: PDB Molecule:poly [adp-ribose] polymerase 1; | PDBTitle: crystal structure of the third zinc-binding domain of human parp-1
Resolution | 1.70 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 203 | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . |  |  |  | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | L | E | I | P | R | F | S | Y | A | T | R | G | Q | V | D | E | N | K | H | H | G | A | L | F | R | F | . | . | . | K | V | F | H | R | D | G | E | P | C | E | R | C | G | S | I | I | E | K | T | T | L | S | S | R | P | F | Y | W | C | P | G
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  | . |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  | . |  |  |  |  |  |
Template Sequence |  | T | N | D | L | K | E | L | L | I | F | N | K | Q | Q | V | P | S | G | E | S | A | I | L | D | R | V | A | D | G | M | V | F | G | A | L | . | L | P | C | E | E | C | S | G | . | . | . | Q | L | V | F | K | S | D | . | A | Y | Y | C | T | G
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  | T | T | T |  |  | . | . | . |  |  |  |  |  | T | T | . |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  | . |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 258 | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . |  | . | . | . | . | . | . | . | 300 |  |  |  | . | . | . | . | . | . | . |  | . | . | 310 | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions