Phyre 2 alignment of P50465 with c3f6qB_

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Job Description | P50465
Confidence | 22.88% | Date | Thu Jan 5 12:04:46 GMT 2012
Rank | 143 | Aligned Residues | 30
% Identity | 20% | Template | c3f6qB_
PDB info | PDB header:signaling protein/signaling protein | Chain: B: PDB Molecule:lim and senescent cell antigen-like-containing | PDBTitle: crystal structure of integrin-linked kinase ankyrin repeat2 domain in complex with pinch1 lim1 domain
Resolution | 1.60 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 232 | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . |  |  | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | H | R | D | G | E | P | C | E | R | C | G | S | I | I | E | . | . | K | T | T | L | S | S | R | P | F | Y | W | C | P | G | C
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | G | S | A | S | A | T | C | E | R | C | K | G | G | F | A | P | A | E | K | I | V | N | S | N | G | E | L | Y | H | E | Q | C
Template Known Secondary structure |  |  |  | T | T |  | B |  | T | T | T |  |  | B |  |  | T | T |  |  |  |  |  |  | T | T |  |  |  |  | T | T | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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