Phyre 2 alignment of P50465 with c3eswA_

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Job Description | P50465
Confidence | 46.15% | Date | Thu Jan 5 12:04:46 GMT 2012
Rank | 84 | Aligned Residues | 27
% Identity | 22% | Template | c3eswA_
PDB info | PDB header:hydrolase | Chain: A: PDB Molecule:peptide-n(4)-(n-acetyl-beta-glucosaminyl)asparagine | PDBTitle: complex of yeast pngase with glcnac2-iac.
Resolution | 3.40 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 237 | . | . | 240 | . | . | . | . |  |  |  |  | . | . | . | . | . | 250 |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  | . | . | . | . | . | 260 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  | . |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  | . |  |  |  |  |  |  |  |  |
Query Sequence |  | P | C | E | R | C | G | S | I | . | . | . | . | I | E | K | T | T | L | . | . | . | . | . | . | . | . | . | . | . | S | S | R | P | . | F | Y | W | C | P | G | C | Q | H
Query Conservation |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  | . |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  | . |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | D | C | N | H | C | G | Q | N | T | S | E | N | M | T | P | L | G | S | Q | G | P | N | G | E | E | S | K | F | N | C | G | T | V | E | I | Y | K | C | N | R | C | G | N
Template Known Secondary structure |  |  |  | S | S | S |  | S | S |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  | T | T | T |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 128 | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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