Phyre 2 alignment of P50465 with d1ltla_

Return to main results | Retrieve Phyre Job Id

Job Description | P50465
Confidence | 25.34% | Date | Thu Jan 5 12:04:46 GMT 2012
Rank | 135 | Aligned Residues | 26
% Identity | 19% | Template | d1ltla_
SCOP info | OB-fold | Nucleic acid-binding proteins | DNA replication initiator (cdc21/cdc54) N-terminal domain
Resolution | 3.00

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 238 | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . |  |  | . | . | . | . | . | . | 260 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |
Query Sequence |  | C | E | R | C | G | S | I | I | E | K | T | T | L | S | S | R | . | . | P | F | Y | W | C | P | G | C | Q | H
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | C | R | G | C | M | R | H | H | A | V | T | Q | S | T | N | M | I | T | E | P | S | L | C | S | E | C | G | G
Template Known Secondary structure |  |  | T | T | T |  |  |  |  |  |  |  |  | S | S | S | S |  |  |  |  | S |  |  | T | T | T |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 132 | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions