Phyre 2 alignment of P50465 with d2nn6i1

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Job Description | P50465
Confidence | 20.90% | Date | Thu Jan 5 12:04:46 GMT 2012
Rank | 159 | Aligned Residues | 22
% Identity | 18% | Template | d2nn6i1
SCOP info | OB-fold | Nucleic acid-binding proteins | Cold shock DNA-binding domain-like
Resolution | 3.35

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 238 | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | C | E | R | C | G | S | I | I | E | K | T | T | L | S | S | R | P | F | Y | W | C | P | G | C | Q | H
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | S | E | S | G | I | Q | M | V | . | . | . | . | P | I | S | W | C | E | M | Q | C | P | K | T | H | T
Template Known Secondary structure |  |  | S | S | S |  | B |  |  | . | . | . | . |  |  |  | T | T |  |  |  |  | T | T | T | T |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 158 | . | 160 | . | . | . | . | . |  |  |  |  | . | . | . | . | 170 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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