Job Description P39314 Confidence 46.67% Date Thu Jan 5 11:59:17 GMT 2012 Rank 4 Aligned Residues 83 % Identity 17% Template c3aqpB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:probable secdf protein-export membrane protein; PDBTitle: crystal structure of secdf, a translocon-associated membrane protein,2 from thermus thrmophilus Resolution 3.30 Å

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		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300						.	.	.	.	.	.	.	.			.	310
Predicted Secondary structure																																																																	.	.	.	.	.									.	.
Query SS confidence																																																																	.	.	.	.	.									.	.
Query Sequence		V	A	I	A	V	L	C	S	W	V	G	A	L	C	W	N	V	A	S	Q	L	L	P	T	V	I	L	G	P	L	I	V	F	E	T	L	A	G	L	L	Y	T	F	L	L	R	Q	Q	M	P	P	L	M	T	L	S	G	I	A	L	L	V	I	.	.	.	.	.	G	V	V	I	A	V	R	A	.	.	K	P
Query Conservation																																																																	.	.	.	.	.									.	.
Alig confidence																																																																	.	.	.	.	.									.	.
Template Conservation
Template Sequence		A	V	M	A	V	L	V	G	L	G	L	I	L	L	Y	V	A	F	R	F	D	W	T	F	G	V	A	S	I	L	A	V	A	H	D	V	A	I	V	A	G	M	Y	S	L	L	G	L	E	F	S	I	P	T	I	A	A	L	L	T	I	V	G	Y	S	I	N	D	S	I	V	V	S	D	R	I	R	E	N	Q
Template Known Secondary structure																					S																											T
Template Predicted Secondary structure
Template SS confidence
		570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.
		311	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	P	L	T	E	S	V	S	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	L	R	H	L	P	Y	A	E
Template Known Secondary structure					S	S	S
Template Predicted Secondary structure
Template SS confidence
		650	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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