BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (118 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q11HS4 30S ribosomal protein S13 n=5 Tax=Proteobacteria... 146 2e-34 UniRef50_Q1GK06 30S ribosomal protein S13 n=21 Tax=Bacteria RepI... 144 1e-33 UniRef50_B1AIP4 30S ribosomal protein S13 n=703 Tax=cellular org... 142 5e-33 UniRef50_A5FRW9 30S ribosomal protein S13 n=691 Tax=cellular org... 138 5e-32 UniRef50_Q2JL76 30S ribosomal protein S13 n=276 Tax=cellular org... 135 5e-31 UniRef50_C1FF43 Ribosomal protein S13, chloroplast n=2 Tax=Micro... 129 3e-29 UniRef50_A8F4T6 30S ribosomal protein S13 n=40 Tax=cellular orga... 125 3e-28 UniRef50_B3DVZ3 30S ribosomal protein S13 n=5 Tax=Chlamydiae/Ver... 125 4e-28 UniRef50_Q601J1 30S ribosomal protein S13 n=8 Tax=Bacteria RepID... 123 2e-27 UniRef50_A8JDP6 Plastid ribosomal protein S13 n=3 Tax=Viridiplan... 120 1e-26 UniRef50_A8GVD5 30S ribosomal protein S13 n=54 Tax=Bacteria RepI... 120 1e-26 UniRef50_Q2GEB8 30S ribosomal protein S13 n=3 Tax=Proteobacteria... 111 8e-24 UniRef50_B0JY40 30S ribosomal protein S13 n=138 Tax=cellular org... 107 1e-22 UniRef50_P42732 30S ribosomal protein S13, chloroplastic n=11 Ta... 105 5e-22 UniRef50_A0T0J8 30S ribosomal protein S13, chloroplastic n=2 Tax... 100 1e-20 UniRef50_Q9G886 Ribosomal protein S13 n=1 Tax=Malawimonas jakobi... 99 3e-20 UniRef50_O21258 Ribosomal protein S13 n=1 Tax=Reclinomonas ameri... 99 5e-20 UniRef50_P26872 Ribosomal protein S13, mitochondrial n=3 Tax=Vir... 97 1e-19 UniRef50_C0QW17 30S ribosomal protein S13 n=2 Tax=Brachyspira Re... 96 4e-19 UniRef50_O59772 37S ribosomal protein subunit sws2, mitochondria... 96 5e-19 UniRef50_C6UN26 30S ribosomal protein n=1 Tax=Candidatus Hodgkin... 91 1e-17 UniRef50_Q9CA19 Small ribosomal subunit protein S13, mitochondri... 89 4e-17 UniRef50_Q8M1G5 Ribosomal protein S13 n=1 Tax=Chaetosphaeridium ... 89 4e-17 UniRef50_Q8LPW2 Small ribosomal subunit protein S13, mitochondri... 89 4e-17 UniRef50_A6YEC0 Ribosomal protein S13 n=1 Tax=Chlorokybus atmoph... 87 2e-16 UniRef50_Q6UVP6 Ribosomal protein S13 n=1 Tax=Pseudendoclonium a... 84 1e-15 UniRef50_Q2TUB5 Ribosomal protein S13 n=1 Tax=Dictyota dichotoma... 83 2e-15 UniRef50_Q3S2A2 Ribosomal protein S13 n=1 Tax=Thalassiosira pseu... 82 7e-15 UniRef50_C8V8H2 40S ribosomal protein S13 (AFU_orthologue; AFUA_... 81 1e-14 UniRef50_Q05FK2 30S ribosomal protein S13 n=1 Tax=Candidatus Car... 80 1e-14 UniRef50_Q0UWA4 Putative uncharacterized protein n=1 Tax=Phaeosp... 79 5e-14 UniRef50_A3LSH2 Predicted protein n=4 Tax=Saccharomycetaceae Rep... 78 1e-13 UniRef50_B2B6R1 Predicted CDS Pa_2_8560 n=1 Tax=Podospora anseri... 77 2e-13 UniRef50_C1KRH7 Ribosomal protein S13 n=2 Tax=Micromonas RepID=C... 76 3e-13 UniRef50_Q2TUF4 Ribosomal protein S13 n=11 Tax=Phaeophyceae RepI... 75 5e-13 UniRef50_P08977 Ribosomal protein S13, mitochondrial n=165 Tax=E... 74 1e-12 UniRef50_C1GA05 40S ribosomal protein S13 n=4 Tax=Onygenales Rep... 73 2e-12 UniRef50_B6JWK5 Mitochondrial 37S ribosomal protein SWS2 n=1 Tax... 73 2e-12 UniRef50_P46747 Ribosomal protein S13, mitochondrial n=1 Tax=Pro... 72 6e-12 UniRef50_B0BLG5 Ribosomal protein S13 n=3 Tax=Embryophyta RepID=... 72 6e-12 UniRef50_Q0DPA4 Os03g0704000 protein n=1 Tax=Oryza sativa Japoni... 71 1e-11 UniRef50_P53937 37S ribosomal protein SWS2, mitochondrial n=13 T... 71 1e-11 UniRef50_Q6E792 Ribosomal protein S13 n=1 Tax=Saprolegnia ferax ... 70 2e-11 UniRef50_B6HVE9 Pc22g19050 protein n=20 Tax=Leotiomyceta RepID=B... 69 3e-11 UniRef50_B2MWT5 Ribosomal protein S13 n=1 Tax=Hemiselmis anderse... 69 4e-11 UniRef50_Q5MF08 Ribosomal protein S13 (Fragment) n=2 Tax=Magnoli... 69 4e-11 UniRef50_A4ZHE7 Ribosomal protein S13 n=4 Tax=Phytophthora RepID... 69 4e-11 UniRef50_B0CSU7 Predicted protein n=1 Tax=Laccaria bicolor S238N... 69 6e-11 UniRef50_A5E736 Putative uncharacterized protein n=1 Tax=Loddero... 69 7e-11 UniRef50_D2JP71 Ribosomal protein S13 n=1 Tax=Synedra acus RepID... 68 1e-10 UniRef50_C5DMG2 KLTH0G08646p n=2 Tax=Saccharomycetaceae RepID=C5... 67 2e-10 UniRef50_Q0QIP8 Ribosomal protein S13 n=1 Tax=Oltmannsiellopsis ... 67 2e-10 UniRef50_Q0P3I6 Rps13 n=1 Tax=Ostreococcus tauri RepID=Q0P3I6_OSTTA 66 4e-10 UniRef50_Q74M95 30S ribosomal protein S13P n=1 Tax=Nanoarchaeum ... 64 1e-09 UniRef50_Q8W9S0 Ribosomal protein S13 n=1 Tax=Mesostigma viride ... 63 2e-09 UniRef50_Q5K8M7 30s ribosomal protein s13, putative n=1 Tax=Filo... 63 4e-09 UniRef50_Q6CFI9 YALI0B06578p n=3 Tax=Saccharomycetales RepID=Q6C... 62 8e-09 UniRef50_A8J3J1 Mitochondrial ribosomal protein S13 n=1 Tax=Chla... 61 1e-08 UniRef50_A4BF40 30S ribosomal protein S13 (Fragment) n=4 Tax=cel... 61 1e-08 UniRef50_Q8M0B4 Ribosomal protein S13 n=1 Tax=Amoebidium parasit... 57 2e-07 UniRef50_B5SQ48 Ribosomal protein S13 n=2 Tax=unclassified Blast... 57 2e-07 UniRef50_P54019 30S ribosomal protein S13P n=10 Tax=Euryarchaeot... 56 3e-07 UniRef50_Q9G8U6 Ribosomal protein S13 n=1 Tax=Rhodomonas salina ... 55 5e-07 UniRef50_B1L794 30S ribosomal protein n=1 Tax=Candidatus Korarch... 54 2e-06 UniRef50_B3H631 Uncharacterized protein At5g14320.2 n=1 Tax=Arab... 53 3e-06 UniRef50_A8NES7 Putative uncharacterized protein n=3 Tax=Agarico... 52 5e-06 UniRef50_O27999 30S ribosomal protein S13P n=1 Tax=Archaeoglobus... 51 9e-06 UniRef50_Q9G8P6 Ribosomal protein S13 n=1 Tax=Naegleria gruberi ... 51 1e-05 UniRef50_D1I5P5 Whole genome shotgun sequence of line PN40024, s... 50 2e-05 UniRef50_Q9G4D3 Ribosomal protein S13 n=1 Tax=Thraustochytrium a... 50 2e-05 UniRef50_Q9HJD6 30S ribosomal protein S13P n=6 Tax=Euryarchaeota... 50 2e-05 UniRef50_Q2NFZ3 30S ribosomal protein S13P n=9 Tax=Euryarchaeota... 50 3e-05 UniRef50_Q9G904 Ribosomal protein S13 n=1 Tax=Ochromonas danica ... 50 3e-05 UniRef50_D1J904 30S ribosomal protein n=1 Tax=uncultured archaeo... 49 6e-05 UniRef50_P41094 40S ribosomal protein S18 n=266 Tax=Eukaryota Re... 49 7e-05 UniRef50_C7NZ06 30S ribosomal protein n=3 Tax=Halobacteriaceae R... 48 9e-05 UniRef50_Q18G53 30S ribosomal protein S13P n=8 Tax=Halobacteriac... 48 1e-04 UniRef50_A0RY01 30S ribosomal protein S13P n=4 Tax=Thaumarchaeot... 48 1e-04 UniRef50_Q09F78 Ribosomal protein S13 n=5 Tax=Tetrahymena RepID=... 47 1e-04 UniRef50_Q0W1V6 30S ribosomal protein S13P n=4 Tax=Euryarchaeota... 47 1e-04 UniRef50_P62269 40S ribosomal protein S18 n=58 Tax=Coelomata Rep... 46 3e-04 UniRef50_Q46GC7 30S ribosomal protein S13P n=9 Tax=Methanomicrob... 45 5e-04 UniRef50_A6RYD3 Putative uncharacterized protein n=1 Tax=Botryot... 45 7e-04 UniRef50_D2EFK4 30S ribosomal protein n=2 Tax=Candidatus Parvarc... 45 8e-04 UniRef50_P46760 Ribosomal protein S13, mitochondrial n=1 Tax=Aca... 42 0.005 UniRef50_D1Z0V5 30S ribosomal protein S13P n=1 Tax=Methanocella ... 41 0.010 UniRef50_B3T3X1 Putative ribosomal protein S13/S18 n=1 Tax=uncul... 41 0.012 UniRef50_Q6LXN1 30S ribosomal protein S13P n=7 Tax=Methanococcus... 40 0.027 UniRef50_B7XLD6 SSU ribosomal protein S13P n=2 Tax=Enterocytozoo... 39 0.036 UniRef50_A0SNY5 30S ribosomal protein n=1 Tax=Candidatus Micrarc... 38 0.083 >UniRef50_Q11HS4 30S ribosomal protein S13 n=5 Tax=Proteobacteria RepID=RS13_MESSB Length = 122 Score = 146 bits (368), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 70/117 (59%), Positives = 92/117 (78%), Gaps = 1/117 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 MARIAG+NIP +K VIAL I+G+G ++ I + GI +D ++ +L++ ++ +R+ + Sbjct: 1 MARIAGVNIPTNKRVVIALQYIHGIGPKLAREITSKVGIPDDRRVHQLTDAEVLAIREAI 60 Query: 61 AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 + + VEGDLRRE+SM+IKRLMDLGCYRGLRHRR LPVRGQRT TNARTRKGP KPI Sbjct: 61 DRDYQVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKPI 117 >UniRef50_Q1GK06 30S ribosomal protein S13 n=21 Tax=Bacteria RepID=RS13_SILST Length = 122 Score = 144 bits (362), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 72/117 (61%), Positives = 87/117 (74%), Gaps = 1/117 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 MARIAG+NIP K IALT I G+G +KAI A I +++ELS+ ++ +R+ + Sbjct: 1 MARIAGVNIPTAKRVPIALTYITGIGPASAKAICEAVNIDATRRVNELSDAEVLAIREHI 60 Query: 61 -AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 A + VEGDLRRE+ M+IKRLMDLGCYRGLRHRR LPVRGQRT TNARTRKGP K I Sbjct: 61 DATYTVEGDLRREVQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAI 117 >UniRef50_B1AIP4 30S ribosomal protein S13 n=703 Tax=cellular organisms RepID=RS13_UREP2 Length = 132 Score = 142 bits (357), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 69/124 (55%), Positives = 92/124 (74%), Gaps = 8/124 (6%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 MARI G++IP+ K VI+LT I+G+GK+ S+ IL A I E++++ +L++ QI +R Sbjct: 1 MARILGVDIPNDKRVVISLTYIFGIGKSTSQQILKLANIDENIRVKDLADEQIAEIRRVA 60 Query: 61 AKFV--------VEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGP 112 FV +EGDLRR ++M IKRLM++G YRG+RHRRGLPVRGQRTKTNARTRKGP Sbjct: 61 LNFVKANGEKLQLEGDLRRTVAMDIKRLMEIGSYRGIRHRRGLPVRGQRTKTNARTRKGP 120 Query: 113 RKPI 116 RK + Sbjct: 121 RKTV 124 >UniRef50_A5FRW9 30S ribosomal protein S13 n=691 Tax=cellular organisms RepID=RS13_DEHSB Length = 129 Score = 138 bits (348), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 62/117 (52%), Positives = 93/117 (79%), Gaps = 1/117 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M RIAG +IPD+K +L I+G+G RS+ +L AG+ + +++++L++ +I+ LR+ + Sbjct: 1 MVRIAGTDIPDNKQVYFSLQYIFGIGPARSEKVLVQAGVDKTIRVNKLTDEEINRLREII 60 Query: 61 AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 K + VEGDLR+EI+++IKRL+D+GCYRG+RH+ LPVRGQRTKTNARTR+GPRK + Sbjct: 61 DKEYRVEGDLRKEITLNIKRLIDIGCYRGIRHKHNLPVRGQRTKTNARTRRGPRKTV 117 >UniRef50_Q2JL76 30S ribosomal protein S13 n=276 Tax=cellular organisms RepID=RS13_SYNJB Length = 127 Score = 135 bits (339), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 69/117 (58%), Positives = 88/117 (75%), Gaps = 1/117 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 MARIAG++IP K IALT IYG+G TRS+ ILA GI D + +L++ ++ LR V Sbjct: 1 MARIAGVDIPREKRVEIALTYIYGIGLTRSRQILAKTGINPDTRTRDLTDAEVAALRTVV 60 Query: 61 -AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 ++ VEGDLRR+ +M+IKRL+D+G YRG RHR GLPVRGQRT+TNARTRKG RK + Sbjct: 61 EGEYQVEGDLRRQEAMNIKRLIDIGTYRGRRHRLGLPVRGQRTRTNARTRKGVRKTV 117 >UniRef50_C1FF43 Ribosomal protein S13, chloroplast n=2 Tax=Micromonas RepID=C1FF43_9CHLO Length = 176 Score = 129 bits (323), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 63/115 (54%), Positives = 85/115 (73%), Gaps = 1/115 (0%) Query: 2 ARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVA 61 AR+AG+ IP++K A IALT +YG+G T +K I+A G+ E+ ++ E E ++ LR EV Sbjct: 58 ARVAGVEIPNNKKAEIALTYVYGIGNTTAKKIMAKTGL-ENKRVREFEEEELTILRAEVD 116 Query: 62 KFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 +++EGDLRR ++IKRL ++ CYRG RH RGLPVRGQRTKTNARTRKG K + Sbjct: 117 TYMIEGDLRRFNMLNIKRLKEIQCYRGRRHIRGLPVRGQRTKTNARTRKGKVKTV 171 >UniRef50_A8F4T6 30S ribosomal protein S13 n=40 Tax=cellular organisms RepID=RS13_THELT Length = 128 Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 60/118 (50%), Positives = 86/118 (72%), Gaps = 9/118 (7%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 MARI G+ +P +K +ALT +YGVG+TR+ IL GI D ++ +L++ ++ ++ Sbjct: 1 MARIVGVELPGNKKCFVALTYLYGVGRTRAFEILKNTGINPDKRVKDLTDEEVS----KI 56 Query: 61 AKFV-----VEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPR 113 KF+ VEG+LR +I+ +IKRL+D+GCYRG RH+ GLPVRGQRT++NARTRKGPR Sbjct: 57 TKFIQDHYKVEGELRTDINRNIKRLIDIGCYRGFRHKLGLPVRGQRTRSNARTRKGPR 114 >UniRef50_B3DVZ3 30S ribosomal protein S13 n=5 Tax=Chlamydiae/Verrucomicrobia group RepID=RS13_METI4 Length = 131 Score = 125 bits (314), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 64/118 (54%), Positives = 83/118 (70%), Gaps = 2/118 (1%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 MARI G+ IP +K + AL IYG+G++R+K I A + ++ +L+ QI+ + + Sbjct: 1 MARILGVEIPGNKPLISALPVIYGIGRSRAKLICEQAELNPQMRAKDLTNQQINRIIQVI 60 Query: 61 AK--FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 + FVVEGDLRREI +IKRL + CYRG+RH RGLPVRGQRT TNARTRKGPRK I Sbjct: 61 EENGFVVEGDLRREIQQNIKRLQSIRCYRGIRHIRGLPVRGQRTSTNARTRKGPRKTI 118 >UniRef50_Q601J1 30S ribosomal protein S13 n=8 Tax=Bacteria RepID=RS13_MYCH2 Length = 137 Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 59/129 (45%), Positives = 83/129 (64%), Gaps = 13/129 (10%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAG-------------IAEDVKISE 47 MAR+ + IP+HK VIAL SI+G+GK+ + I+ + E+ K+ E Sbjct: 1 MARVLNVEIPNHKRIVIALCSIFGIGKSLATEIVEKTAKLQEEKFGKKFPILTENTKVKE 60 Query: 48 LSEGQIDTLRDEVAKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNAR 107 ++E + +RD + EGDL RE+ +IKRL+++ CYRG+RHR+GLPVRGQ T+ NAR Sbjct: 61 INEEVLQVIRDVAKTYKTEGDLHREVQSNIKRLIEIKCYRGIRHRKGLPVRGQVTQKNAR 120 Query: 108 TRKGPRKPI 116 TRKGPRK I Sbjct: 121 TRKGPRKTI 129 >UniRef50_A8JDP6 Plastid ribosomal protein S13 n=3 Tax=Viridiplantae RepID=A8JDP6_CHLRE Length = 164 Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 59/114 (51%), Positives = 80/114 (70%), Gaps = 1/114 (0%) Query: 3 RIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAK 62 R+ + IP+ K ++L I+G+G+T ++ IL G+ E+ K EL+E +I+ LR EV K Sbjct: 44 RVNNVEIPNSKRIEVSLQYIFGIGETTAQTILRDTGV-ENKKTYELNEEEINKLRSEVEK 102 Query: 63 FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 + E DLRR ++ +IKRL D+GCYRG RH GLPVRGQRTKTNARTRKG K + Sbjct: 103 YTTEADLRRVVAQNIKRLKDIGCYRGRRHIMGLPVRGQRTKTNARTRKGKAKTV 156 >UniRef50_A8GVD5 30S ribosomal protein S13 n=54 Tax=Bacteria RepID=RS13_RICB8 Length = 125 Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 59/112 (52%), Positives = 84/112 (75%), Gaps = 1/112 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 MARIA +NIPD+K V++LT IYG+G T +K I A I ED K+ +L++ ++ +LR+ + Sbjct: 1 MARIASVNIPDNKRLVVSLTYIYGLGTTMAKTICKKAKILEDKKVKDLTDQELISLRNII 60 Query: 61 A-KFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKG 111 ++ VEGDLRRE++++IK+ D+ Y+GLRH R LPVRGQ T +NARTRKG Sbjct: 61 ENEYKVEGDLRREVTLNIKKKKDIRSYQGLRHIRKLPVRGQNTHSNARTRKG 112 >UniRef50_Q2GEB8 30S ribosomal protein S13 n=3 Tax=Proteobacteria RepID=RS13_NEOSM Length = 123 Score = 111 bits (277), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 50/110 (45%), Positives = 78/110 (70%), Gaps = 1/110 (0%) Query: 3 RIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAK 62 R G+N+PD+K V+ALT +YG+G ++ I ++ I K+ +L + Q++++ + Sbjct: 2 RFLGVNLPDNKAVVVALTYLYGIGLPTARKICSSLAIDGSAKLPDLEQEQLNSIMAYIKN 61 Query: 63 FV-VEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKG 111 + EG+LR+ ++ SIK L+D+ CYRG+RHR+ LPVRGQRT+TNARTRKG Sbjct: 62 DIPFEGELRKSVAFSIKHLVDIKCYRGVRHRKNLPVRGQRTRTNARTRKG 111 >UniRef50_B0JY40 30S ribosomal protein S13 n=138 Tax=cellular organisms RepID=RS13_MICAN Length = 127 Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 52/101 (51%), Positives = 72/101 (71%), Gaps = 1/101 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 MARIAG+++P K IALT +YGVG +RS+ +L+A G+ D ++ +LS+ + LR + Sbjct: 1 MARIAGVDLPRDKRVEIALTYLYGVGLSRSQEVLSATGVNPDTRVKDLSDEDVAALRTYI 60 Query: 61 -AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQ 100 + +EGDLRR +M+IKRL D+G YRG RHR GLPVRGQ Sbjct: 61 ETNYQIEGDLRRWEAMNIKRLADIGTYRGRRHRLGLPVRGQ 101 >UniRef50_P42732 30S ribosomal protein S13, chloroplastic n=11 Tax=Spermatophyta RepID=RR13_ARATH Length = 169 Score = 105 bits (261), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 50/107 (46%), Positives = 77/107 (71%), Gaps = 1/107 (0%) Query: 2 ARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVA 61 AR+ G+ IP +K +L I+G+G+TR++ IL + E+ +++E ++ LRDEV+ Sbjct: 48 ARVGGVEIPANKRIEYSLQYIHGIGRTRARQILVDLQM-ENKITKDMAEEELIILRDEVS 106 Query: 62 KFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNART 108 K+++EGDLRR +++IKRL ++ CYRG+RH +GLP RGQRTK N RT Sbjct: 107 KYMIEGDLRRFNALAIKRLKEIQCYRGVRHIQGLPCRGQRTKNNCRT 153 >UniRef50_A0T0J8 30S ribosomal protein S13, chloroplastic n=2 Tax=Eukaryota RepID=RR13_PHATR Length = 123 Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 50/118 (42%), Positives = 77/118 (65%), Gaps = 2/118 (1%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRD-- 58 M R+ G+++P +K ALT I+G+G T ++ I+ A I + + +L+ + LR Sbjct: 1 MVRLVGVDLPRNKRIAYALTYIHGIGLTSARKIIEIANINPETRTVDLTTEETVALRQTL 60 Query: 59 EVAKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 E + +EGDLRR ++IKRL ++ C+RG RHR LPVRGQRT+TNAR+R+G +K + Sbjct: 61 EESDLKLEGDLRRFNGLNIKRLNEINCHRGKRHRNNLPVRGQRTRTNARSRRGSKKTV 118 >UniRef50_Q9G886 Ribosomal protein S13 n=1 Tax=Malawimonas jakobiformis RepID=Q9G886_9EUKA Length = 126 Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 53/111 (47%), Positives = 72/111 (64%), Gaps = 1/111 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M + G I +K+ IALTSIYG+G + I + GI KI +++ Q+ T+R V Sbjct: 1 MLYLFGTYIKKNKNLRIALTSIYGLGYKNTCKICNSIGIGNKKKIDKITNTQLYTIRKIV 60 Query: 61 A-KFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 K+ + GDLRR IS++IKR +D+ YRGLRH+ PVRGQRT TNART+K Sbjct: 61 NNKYKISGDLRRIISINIKRYIDIKSYRGLRHKLSYPVRGQRTHTNARTQK 111 >UniRef50_O21258 Ribosomal protein S13 n=1 Tax=Reclinomonas americana RepID=O21258_RECAM Length = 122 Score = 98.6 bits (244), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 49/115 (42%), Positives = 73/115 (63%), Gaps = 1/115 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M + GINI +K AL +IYG+G + + + G+ +K+S+L+E QI L + Sbjct: 1 MIHLFGININSNKKIPFALKAIYGLGNKKVDELCSYMGLNPKLKMSDLNESQISKLCHYI 60 Query: 61 AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRK 114 + F++E +LR+ + +IKRL+D+ YRGLRH GLPV GQRT TNA+T+K K Sbjct: 61 EENFLIESELRKNQTYNIKRLLDIKSYRGLRHAYGLPVHGQRTHTNAKTQKSLSK 115 >UniRef50_P26872 Ribosomal protein S13, mitochondrial n=3 Tax=Viridiplantae RepID=RT13_MARPO Length = 120 Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 44/109 (40%), Positives = 74/109 (67%), Gaps = 1/109 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M+ I G N+ +K IALT I+G+G ++ + G+++ +K+++L++ Q D + + Sbjct: 1 MSYILGTNLNSNKQVKIALTRIFGIGPKKAIQVCDQLGLSDTIKVNKLTKYQFDQILKII 60 Query: 61 AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNART 108 ++ ++V+ +L+R I IKRL+ +GCYRG RH GLP+RGQRT TNA+T Sbjct: 61 SQNYLVDSELKRVIQRDIKRLISIGCYRGFRHNAGLPLRGQRTHTNAKT 109 >UniRef50_C0QW17 30S ribosomal protein S13 n=2 Tax=Brachyspira RepID=C0QW17_BRAHW Length = 125 Score = 95.5 bits (236), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 51/107 (47%), Positives = 70/107 (65%), Gaps = 1/107 (0%) Query: 6 GINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV-AKFV 64 G+ I ++K IALT IYG+G+T + I A I +K +L++ QI LRD + A Sbjct: 2 GVEIRNNKRIEIALTDIYGIGRTLAHVICDKANIDYSIKAKDLTDAQITALRDAIEATTK 61 Query: 65 VEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKG 111 VEGDLR E+ +IKRL D+ YRG+RH + LPV GQRT+TN+R +G Sbjct: 62 VEGDLRTELYNNIKRLKDIHSYRGMRHIKRLPVHGQRTRTNSRNARG 108 >UniRef50_O59772 37S ribosomal protein subunit sws2, mitochondrial n=1 Tax=Schizosaccharomyces pombe RepID=SWS2_SCHPO Length = 151 Score = 95.5 bits (236), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 45/110 (40%), Positives = 67/110 (60%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M I G+ + D K AL S YG+G +++ I A +++ EL+ Q+ TL + Sbjct: 1 MVYILGVAVNDDKPVRFALLSFYGIGHAKAEEICAKLSFHNTLRVRELTNVQLTTLSQLL 60 Query: 61 AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 + +EGDLRR+ + I RL+++ CYRG+RH GLPV GQ T+TNA+T K Sbjct: 61 SGMTIEGDLRRQRNADISRLVNIRCYRGMRHVNGLPVNGQNTRTNAKTAK 110 >UniRef50_C6UN26 30S ribosomal protein n=1 Tax=Candidatus Hodgkinia cicadicola Dsem RepID=C6UN26_HODCD Length = 118 Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 48/108 (44%), Positives = 67/108 (62%), Gaps = 7/108 (6%) Query: 7 INIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQID----TLRDEVAK 62 + +P+HK +AL ++GVG + +L A + ++ ++L+ Q D L DE Sbjct: 1 MELPEHKQVWVALQRVHGVGPHVATCVLRALAVPLRLRTAQLTRLQRDAITRVLEDE--- 57 Query: 63 FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 VVEG LR ++ I +L +GCYRGLRHR GLPVRGQRT+TNA TRK Sbjct: 58 LVVEGGLRLKVRADINKLRRMGCYRGLRHRLGLPVRGQRTRTNAHTRK 105 >UniRef50_Q9CA19 Small ribosomal subunit protein S13, mitochondrial n=4 Tax=rosids RepID=RT13_ARATH Length = 154 Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 44/109 (40%), Positives = 67/109 (61%), Gaps = 1/109 (0%) Query: 3 RIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAK 62 R+ +P++K L +YG+G+ +S +L GI + +L+ ++ LR+EV + Sbjct: 33 RVGNAEVPNNKPLKTGLQEVYGIGRRKSHQVLCHLGITNKL-ARDLTGKELIDLREEVGQ 91 Query: 63 FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKG 111 +LRR + I+RL+++ CYRG RHR GLP RGQRT TNART+KG Sbjct: 92 HQHGDELRRRVGSEIQRLVEVDCYRGSRHRHGLPCRGQRTSTNARTKKG 140 >UniRef50_Q8M1G5 Ribosomal protein S13 n=1 Tax=Chaetosphaeridium globosum RepID=Q8M1G5_CHAGL Length = 122 Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 40/99 (40%), Positives = 66/99 (66%), Gaps = 1/99 (1%) Query: 11 DHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVA-KFVVEGDL 69 + K AL +YG+G+ ++ I + G++ +K+++L+ Q D L ++ F++E +L Sbjct: 15 NKKQLRFALIQLYGIGRAKASFICSLLGVSPFIKVNQLTRFQTDELNKIISSNFLIELEL 74 Query: 70 RREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNART 108 +R + I+RL+ +GCYRGLRH GLP+RGQRT TNA+T Sbjct: 75 KRIVQTDIRRLVTIGCYRGLRHIAGLPLRGQRTHTNAKT 113 >UniRef50_Q8LPW2 Small ribosomal subunit protein S13, mitochondrial n=2 Tax=Glycine max RepID=RT13_SOYBN Length = 148 Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 40/102 (39%), Positives = 74/102 (72%), Gaps = 1/102 (0%) Query: 9 IPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKFVVEGD 68 IPD+K V AL +++G+G+++++ I+A G+ E+ + +LS+ ++ ++R+ ++K+++ D Sbjct: 39 IPDNKRLVYALQNLHGIGRSKAQHIVAELGV-ENKFVKDLSKRELYSIRELLSKYLIGND 97 Query: 69 LRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 L++ + + RL+ + CYRG+RH LP RGQRT TNARTR+ Sbjct: 98 LKKCVERDVGRLVGIQCYRGIRHVDSLPCRGQRTHTNARTRR 139 >UniRef50_A6YEC0 Ribosomal protein S13 n=1 Tax=Chlorokybus atmophyticus RepID=A6YEC0_CHLAT Length = 121 Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 46/109 (42%), Positives = 63/109 (57%), Gaps = 1/109 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M+ I+ K IAL ++G+G + S I G +E+ + +LS+ QID L V Sbjct: 1 MSYNLQIDFYSKKKIRIALRQLFGIGPSLSNQICDQLGFSENTTVDQLSKSQIDRLTRLV 60 Query: 61 AKFVVEG-DLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNART 108 + G +LRR IS IKR + +GCYRG RH LP+RGQRT +NART Sbjct: 61 NQQYFTGPELRRLISQDIKRFIRIGCYRGFRHNDALPLRGQRTHSNART 109 >UniRef50_Q6UVP6 Ribosomal protein S13 n=1 Tax=Pseudendoclonium akinetum RepID=Q6UVP6_PSEAK Length = 119 Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 41/108 (37%), Positives = 61/108 (56%), Gaps = 1/108 (0%) Query: 4 IAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKF 63 + G N+ ++K A AL +IYGVG+ + A+ GI ++ EL+ Q++ L + Sbjct: 3 LLGSNVSENKAAFFALQAIYGVGQKSAAAVCNLVGINPQTRLRELNSTQLELLTKSCRRL 62 Query: 64 VVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKG 111 + +RE +IK L+ + CYRG RH LP RGQRT+TNA T K Sbjct: 63 IASNK-KREKVEAIKSLIKISCYRGTRHMNALPCRGQRTRTNAYTSKN 109 >UniRef50_Q2TUB5 Ribosomal protein S13 n=1 Tax=Dictyota dichotoma RepID=Q2TUB5_DICDH Length = 115 Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 42/111 (37%), Positives = 63/111 (56%), Gaps = 2/111 (1%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRD-- 58 M+ I G + K + +L+ I+G+G RS+ + +GI D + ++ QI L + Sbjct: 1 MSYIVGTSFSAEKSVLFSLSYIFGIGSYRSRILCNKSGIGLDCRFCDIDYDQIRILENLI 60 Query: 59 EVAKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTR 109 E + F + L + I+R + CYRGLRH+RGLPVRGQRT TNA+ R Sbjct: 61 EASSFRLGQSLEKYQIERIRRFYGIMCYRGLRHKRGLPVRGQRTHTNAKRR 111 >UniRef50_Q3S2A2 Ribosomal protein S13 n=1 Tax=Thalassiosira pseudonana RepID=Q3S2A2_THAPS Length = 115 Score = 81.6 bits (200), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 40/110 (36%), Positives = 66/110 (60%), Gaps = 2/110 (1%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M I +P+ K +LT ++G+GK +S I G++ + K+S+L+ Q L + Sbjct: 1 MVYILETELPEDKSIYFSLTKVFGIGKFQSLLICKRLGLSSNCKLSKLTSDQTIKLVKSI 60 Query: 61 --AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNART 108 A V+ +LR+ ++ +K+L+ + Y+G+R RGLPVRGQRT TNA+T Sbjct: 61 ENANLVINSNLRKSKTILLKKLIQIKTYKGIRRLRGLPVRGQRTHTNAKT 110 >UniRef50_C8V8H2 40S ribosomal protein S13 (AFU_orthologue; AFUA_4G07640) n=6 Tax=Leotiomyceta RepID=C8V8H2_EMENI Length = 119 Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 42/107 (39%), Positives = 62/107 (57%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M I G+N P+ + +L +GVG S I++ I + K+ EL+ Q+ L + Sbjct: 1 MVFILGVNFPEGQLVQKSLQKFFGVGPQVSSRIMSRFHIHQTCKVGELANKQVLDLTAVL 60 Query: 61 AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNAR 107 ++ +E DLRR++ IKRL + G YRG RH GLPVRGQRT+ N + Sbjct: 61 SEMKIENDLRRQVLDDIKRLKETGTYRGRRHALGLPVRGQRTRNNNK 107 >UniRef50_Q05FK2 30S ribosomal protein S13 n=1 Tax=Candidatus Carsonella ruddii PV RepID=RS13_CARRP Length = 118 Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 63/107 (58%) Query: 4 IAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKF 63 I G+ I K+ V LT IYG+G + S I + ++ K +L+ + + + + K Sbjct: 5 ICGVLISKKKNIVFGLTKIYGIGYSMSLKICSKIENFKNKKFKDLTNEEKAKIENFINKI 64 Query: 64 VVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 VE +L+ I + K+ ++L Y+ LRH++ LP RGQRTKTNA+TRK Sbjct: 65 NVENNLKTIIKENFKKKLNLNSYKSLRHKKKLPCRGQRTKTNAKTRK 111 >UniRef50_Q0UWA4 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum RepID=Q0UWA4_PHANO Length = 163 Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 41/108 (37%), Positives = 59/108 (54%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M + G N + +L S +G+G S+ ++A I K+ L + L E+ Sbjct: 1 MVFLNGFNFTEATLVKRSLESFFGIGPKVSQGLMAKFHIHPWAKVGSLKNTTVLELTAEL 60 Query: 61 AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNART 108 + +E DLRRE+ +I+RL D+G YRG RH GLPVRGQRT+T T Sbjct: 61 SNMKIENDLRREVQENIRRLKDMGTYRGRRHAMGLPVRGQRTRTQITT 108 >UniRef50_A3LSH2 Predicted protein n=4 Tax=Saccharomycetaceae RepID=A3LSH2_PICST Length = 122 Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 37/88 (42%), Positives = 58/88 (65%) Query: 21 SIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKFVVEGDLRREISMSIKRL 80 +I+G+G ++ I A GI +++++LSE QI L E++ +VEG L+++I+ I+ Sbjct: 23 AIFGIGYQTAERICAKVGIYPQMRMNQLSEPQIMDLNKEISDLLVEGHLKQKINNDIRMK 82 Query: 81 MDLGCYRGLRHRRGLPVRGQRTKTNART 108 D+G Y G RH +GLPVRGQ T+ NA T Sbjct: 83 RDIGSYSGFRHAQGLPVRGQGTRNNAAT 110 >UniRef50_B2B6R1 Predicted CDS Pa_2_8560 n=1 Tax=Podospora anserina RepID=B2B6R1_PODAN Length = 119 Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 42/108 (38%), Positives = 57/108 (52%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M + G+N + K AL Y +G + I+A I KI LS + L E+ Sbjct: 1 MVSLFGVNFHEAKLVQKALQHFYALGSQTATRIMAKHSIHPRAKIGTLSPKTVTALTAEL 60 Query: 61 AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNART 108 + V+E D R+ I +IKRL D+G YRG RH LPVRGQRT+ +T Sbjct: 61 STMVIESDARKIIQDNIKRLRDMGTYRGRRHAMNLPVRGQRTRNQNKT 108 >UniRef50_C1KRH7 Ribosomal protein S13 n=2 Tax=Micromonas RepID=C1KRH7_9CHLO Length = 120 Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 1/100 (1%) Query: 18 ALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKFVVEG-DLRREISMS 76 ALT IYG+G + + G+ + + L+ Q+D L + +F V G +L R I Sbjct: 18 ALTQIYGIGSFTANQVCDQLGLRSSLLVKHLNGAQLDQLARVINRFHVTGQELERVIQQD 77 Query: 77 IKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 I R + + Y+G R +GLPVRGQRT TNAR + +KPI Sbjct: 78 ISRFVRISIYKGFRFTQGLPVRGQRTHTNARNTRKKKKPI 117 >UniRef50_Q2TUF4 Ribosomal protein S13 n=11 Tax=Phaeophyceae RepID=Q2TUF4_9PHAE Length = 119 Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 44/111 (39%), Positives = 63/111 (56%), Gaps = 2/111 (1%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRD-- 58 M I G +IP+ K V ++ IYG+G ++SK + AG D + ++ + L + Sbjct: 1 MPFIIGTSIPEDKVLVQSVAHIYGIGLSQSKILCKKAGFGSDSRGRNVTFSKGKNLENLA 60 Query: 59 EVAKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTR 109 E + DLRR + I+RL + YRG RHR+GLPVRGQRT TNA+ R Sbjct: 61 EAIPLPLGPDLRRFQNDKIRRLCLISTYRGSRHRKGLPVRGQRTHTNAKKR 111 >UniRef50_P08977 Ribosomal protein S13, mitochondrial n=165 Tax=Embryophyta RepID=RT13_MAIZE Length = 129 Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 48/120 (40%), Positives = 75/120 (62%), Gaps = 6/120 (5%) Query: 1 MARIAGI-NIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDE 59 M+ I+G ++PD + IA T + G+G ++ + GI+ ++KI EL++ QID + Sbjct: 1 MSYISGARSLPD-EQVRIASTKMDGIGPKKAIQLRYRLGISGNIKIHELTKYQIDQIEQM 59 Query: 60 VAK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIKK 118 +A+ VV +L+R I+RL+ + YRG+RH+ G P+RGQRT TNART RK I+K Sbjct: 60 IAQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNART---ARKQIRK 116 >UniRef50_C1GA05 40S ribosomal protein S13 n=4 Tax=Onygenales RepID=C1GA05_PARBD Length = 157 Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 38/91 (41%), Positives = 55/91 (60%) Query: 18 ALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKFVVEGDLRREISMSI 77 AL S +G+G ++A + E KI +L QI +L +++ +E DLRR+I I Sbjct: 50 ALQSFFGIGPLTCSKVMARFYVHETAKIGDLGNKQILSLTAALSEMKIENDLRRQILDDI 109 Query: 78 KRLMDLGCYRGLRHRRGLPVRGQRTKTNART 108 +RL D+G RG RH GLPVRGQRT++ +T Sbjct: 110 QRLKDIGTVRGRRHALGLPVRGQRTRSQNKT 140 >UniRef50_B6JWK5 Mitochondrial 37S ribosomal protein SWS2 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6JWK5_SCHJY Length = 142 Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 34/94 (36%), Positives = 56/94 (59%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M + G+++PDHK ALTS YG+G+ ++AI A + +KI +L+E Q+ L + Sbjct: 1 MVFLLGVSLPDHKPVKYALTSFYGIGRITAEAICARLSFHDTLKIQDLTETQLTRLSQIL 60 Query: 61 AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRG 94 +E DL+R++ +I R + + Y+GLRH G Sbjct: 61 NGMTLESDLKRDVQKNIARYVQIRSYKGLRHSAG 94 >UniRef50_P46747 Ribosomal protein S13, mitochondrial n=1 Tax=Prototheca wickerhamii RepID=RT13_PROWI Length = 119 Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 42/118 (35%), Positives = 62/118 (52%), Gaps = 1/118 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M I ++ D K A IYG+G I G++ + ++ LS GQ L + Sbjct: 1 MVYIQNTHLNDKKQIYQACAQIYGLGHHHCLQICDVLGVSPETRLGMLSTGQHTLLAQII 60 Query: 61 AKFVVEG-DLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIK 117 + G D+RR +I+RL+++ YRG RH +GLPVRGQR+ NART + + IK Sbjct: 61 TQNYDTGSDVRRFTRQNIQRLVNIHSYRGYRHIQGLPVRGQRSHGNARTVRKLKNVIK 118 >UniRef50_B0BLG5 Ribosomal protein S13 n=3 Tax=Embryophyta RepID=B0BLG5_CYCTA Length = 150 Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 40/109 (36%), Positives = 66/109 (60%), Gaps = 1/109 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M+ I G ++ IA T I G+G ++ + GI++++K++E ++ QID + + Sbjct: 1 MSYIPGARSVPNEQVRIASTKIDGIGPKKATRVRYRLGISDNIKVNESTKYQIDQIEQII 60 Query: 61 AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNART 108 + VV +L+R I+R + + YRG+RH+ GLP+RGQRT TNART Sbjct: 61 GQDHVVHWELKRGKRADIERSISISRYRGIRHQDGLPLRGQRTHTNART 109 >UniRef50_Q0DPA4 Os03g0704000 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q0DPA4_ORYSJ Length = 203 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 36/86 (41%), Positives = 56/86 (65%), Gaps = 1/86 (1%) Query: 3 RIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAK 62 RI G+ IP+HK +L I+G+G++RS+ IL V +LSE ++ TLR EV K Sbjct: 48 RIGGVEIPNHKRVEYSLQYIHGIGRSRSRQILLDLNFDNKVT-KDLSEEEVITLRKEVTK 106 Query: 63 FVVEGDLRREISMSIKRLMDLGCYRG 88 +++EGDL+R ++I+RL ++ CYR Sbjct: 107 YMIEGDLKRFNRVAIERLKEIRCYRA 132 >UniRef50_P53937 37S ribosomal protein SWS2, mitochondrial n=13 Tax=Saccharomycetales RepID=SWS2_YEAST Length = 143 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 37/93 (39%), Positives = 56/93 (60%), Gaps = 1/93 (1%) Query: 17 IALTS-IYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKFVVEGDLRREISM 75 IAL S YG+GKT ++ I + G +++ +LSE QI ++ E++ +EGD R + Sbjct: 18 IALASKFYGIGKTTAEKICSKLGFYPWMRMHQLSEPQIMSIASELSTMTIEGDARAIVKD 77 Query: 76 SIKRLMDLGCYRGLRHRRGLPVRGQRTKTNART 108 +I +G Y G+RH LPVRGQ T+ NA+T Sbjct: 78 NIALKRKIGSYSGMRHTLHLPVRGQHTRNNAKT 110 >UniRef50_Q6E792 Ribosomal protein S13 n=1 Tax=Saprolegnia ferax RepID=Q6E792_SAPFE Length = 117 Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 62/109 (56%), Gaps = 1/109 (0%) Query: 9 IPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKFV-VEG 67 I + + +LT +YG+ K +SK I GI I++L + Q++ L + + K + +E Sbjct: 9 ISNSNSILYSLTILYGINKFQSKRICKNIGINPQTTINKLKKNQLNRLINYINKNIKIEQ 68 Query: 68 DLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 L++ + L+++ RG+RH GLPVRGQRT TNA+T K + I Sbjct: 69 LLKKIKKDNFNNLLNIKTNRGIRHNLGLPVRGQRTHTNAKTSKKLKNTI 117 >UniRef50_B6HVE9 Pc22g19050 protein n=20 Tax=Leotiomyceta RepID=B6HVE9_PENCW Length = 114 Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 33/84 (39%), Positives = 51/84 (60%) Query: 21 SIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKFVVEGDLRREISMSIKRL 80 + +G+G S +++ I ++ EL+ Q+ L +++ +E DLRRE+ IKR+ Sbjct: 11 TFFGIGNNSSARLMSRFNIHPTCRVGELANKQVLDLTAVLSEMKIENDLRREVLNDIKRM 70 Query: 81 MDLGCYRGLRHRRGLPVRGQRTKT 104 + G YRG RH GLPVRGQRT+T Sbjct: 71 KETGTYRGRRHALGLPVRGQRTRT 94 >UniRef50_B2MWT5 Ribosomal protein S13 n=1 Tax=Hemiselmis andersenii RepID=B2MWT5_9CRYP Length = 113 Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 2/112 (1%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M I +N+ +K + +YG+G+ ++ I D + +L++ + L ++ Sbjct: 1 MVYILSVNLKSNKRVYFEVAKLYGIGRYQAIQFCNQLNIGFDCYVKDLNQAYLYALLKQI 60 Query: 61 --AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 +V+ L+ + I L+D+ YRG+RH LPVRGQRT+TNAR+RK Sbjct: 61 EHQNLIVDTMLQDQQKKIISELIDIKAYRGVRHIFRLPVRGQRTRTNARSRK 112 >UniRef50_Q5MF08 Ribosomal protein S13 (Fragment) n=2 Tax=Magnoliophyta RepID=Q5MF08_9MAGN Length = 109 Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 38/101 (37%), Positives = 64/101 (63%), Gaps = 2/101 (1%) Query: 9 IPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAK-FVVEG 67 +PD + IA T + G+G ++ + GI+ ++K++EL++ QI+ + + + VV Sbjct: 6 VPD-EQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIEKMEQMIGQDHVVHW 64 Query: 68 DLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNART 108 +L++ I+RL+ + YRG+RH+ G PVRGQRT TNART Sbjct: 65 ELKKGERADIERLISISRYRGIRHKDGSPVRGQRTHTNART 105 >UniRef50_A4ZHE7 Ribosomal protein S13 n=4 Tax=Phytophthora RepID=A4ZHE7_PHYRM Length = 138 Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 38/111 (34%), Positives = 62/111 (55%), Gaps = 1/111 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M I I D K + +LT +YG+ + +S I GI + +++L ++ L + + Sbjct: 1 MLYIFNKTISDSKSILYSLTILYGINEYQSNKICKNIGINPQITLNKLKNNHVNRLINYI 60 Query: 61 AKFV-VEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 K + VE L++ + I L+++ RG+R +GLPVRGQRT TNA+T K Sbjct: 61 NKNLKVEQLLKKSKTERITELVEIKSNRGIRQSQGLPVRGQRTHTNAKTSK 111 >UniRef50_B0CSU7 Predicted protein n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0CSU7_LACBS Length = 112 Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 41/110 (37%), Positives = 59/110 (53%), Gaps = 6/110 (5%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M I G+N+PD+ A ALT YG+G + + A + + K+ +LS Q+ +L Sbjct: 1 MVHILGVNLPDNHLARFALTKFYGIGHKTAHRLCARLQVHDKCKVKDLSPFQVTSL---- 56 Query: 61 AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 A F+ REI +I +G Y G RH LPVRGQ T++NA+T K Sbjct: 57 ASFLSAPA--REIRENIAHQRMIGSYVGKRHAMHLPVRGQNTQSNAKTAK 104 >UniRef50_A5E736 Putative uncharacterized protein n=1 Tax=Lodderomyces elongisporus RepID=A5E736_LODEL Length = 122 Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 33/88 (37%), Positives = 54/88 (61%) Query: 21 SIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKFVVEGDLRREISMSIKRL 80 +I+G+G + + A GI K+++L+E QI L E+++ VEG L+++I+ I+ Sbjct: 23 TIFGIGPKVASQLTARVGIYPRCKVNQLTEQQILELNKEISQLTVEGHLKQKINSDIQMK 82 Query: 81 MDLGCYRGLRHRRGLPVRGQRTKTNART 108 + G+RH +G PVRGQ+TKTN T Sbjct: 83 RAINSRAGIRHAQGFPVRGQKTKTNGAT 110 >UniRef50_D2JP71 Ribosomal protein S13 n=1 Tax=Synedra acus RepID=D2JP71_9STRA Length = 117 Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 38/110 (34%), Positives = 63/110 (57%), Gaps = 3/110 (2%) Query: 4 IAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQI---DTLRDEV 60 I + D+K I LT IYG+G S I G+++++ ++S+ + D + ++ Sbjct: 3 ILDTKLKDNKIMTIGLTEIYGIGSKISFKICKKLGLSKNITADQVSKNHLSSLDYILNKE 62 Query: 61 AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 K V +L++ S +++L+ + RGLR +GLPVRGQRT TNA+T K Sbjct: 63 YKLKVSNELKKIESFRLQKLISIKSSRGLRRVKGLPVRGQRTHTNAKTAK 112 >UniRef50_C5DMG2 KLTH0G08646p n=2 Tax=Saccharomycetaceae RepID=C5DMG2_LACTC Length = 149 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 35/93 (37%), Positives = 55/93 (59%), Gaps = 1/93 (1%) Query: 17 IALTS-IYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKFVVEGDLRREISM 75 IAL S YG+G S+ + A G +++ +LSE QI ++ E++ +EG+ R + Sbjct: 18 IALASKFYGIGLKTSETLCAKLGFYPWMRMHQLSEPQIMSITSELSTMTIEGNARAVVKE 77 Query: 76 SIKRLMDLGCYRGLRHRRGLPVRGQRTKTNART 108 +I +G Y+G+RH LPVRGQ T+ NA+T Sbjct: 78 NIALKRRIGSYQGMRHALNLPVRGQHTRNNAKT 110 >UniRef50_Q0QIP8 Ribosomal protein S13 n=1 Tax=Oltmannsiellopsis viridis RepID=Q0QIP8_OLTVI Length = 117 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 55/108 (50%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M I D K +L G+G ++ I G+A + +S L+ QI L + Sbjct: 1 MKYILQTPCDDKKPLKASLQKFLGIGPKKAIEICDKLGVASSMNLSSLNAYQIHVLTGIL 60 Query: 61 AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNART 108 + + +RR+ +I+RL+ + YRG RH GLP RGQRTKTNA T Sbjct: 61 NSYDIRHSVRRKKRENIQRLVRISSYRGFRHTAGLPCRGQRTKTNANT 108 >UniRef50_Q0P3I6 Rps13 n=1 Tax=Ostreococcus tauri RepID=Q0P3I6_OSTTA Length = 116 Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 1/93 (1%) Query: 19 LTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTL-RDEVAKFVVEGDLRREISMSI 77 L IYG+ + I G+ V + LS Q + L R ++ E DL++++ + Sbjct: 19 LKKIYGINSFLANQICDQLGLHTTVTVGALSLDQTEKLGRILQYYYLTEHDLKKQVQGNF 78 Query: 78 KRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 +R + +GCYRG R + LP+RGQRT TNA+T K Sbjct: 79 QRFIQIGCYRGFRVTQRLPLRGQRTHTNAKTAK 111 >UniRef50_Q74M95 30S ribosomal protein S13P n=1 Tax=Nanoarchaeum equitans RepID=RS13_NANEQ Length = 153 Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 41/130 (31%), Positives = 62/130 (47%), Gaps = 23/130 (17%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRD-- 58 + IA +++ HK + L + GV + A+ AA GI + KI LS+ +++ L D Sbjct: 13 IVHIADVDLDGHKPIYVELRKVVGVNWMFAHAVCAALGIDKWRKIGSLSDEELEKLEDAL 72 Query: 59 -------------------EVAK--FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPV 97 E K +V D + + IKR M + +RG RHR GLPV Sbjct: 73 RNPWKYGIPSWLYNRRRDPETGKDLHLVGNDYKITMEFDIKREMQINSWRGYRHREGLPV 132 Query: 98 RGQRTKTNAR 107 RGQRT+++ R Sbjct: 133 RGQRTRSHHR 142 >UniRef50_Q8W9S0 Ribosomal protein S13 n=1 Tax=Mesostigma viride RepID=Q8W9S0_MESVI Length = 116 Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 3/95 (3%) Query: 17 IALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKFV---VEGDLRREI 73 I L ++G+GK S I + G+ E + S+ +D+L++ + + + L I Sbjct: 17 ILLQKVFGLGKKNSIQICRSMGLHERMSPKMSSKFILDSLQERLETSLGNSLGAPLINRI 76 Query: 74 SMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNART 108 ++ +RL+ + YRG RH RGLP RGQRT+TNART Sbjct: 77 HLNKERLIKISSYRGFRHHRGLPARGQRTRTNART 111 >UniRef50_Q5K8M7 30s ribosomal protein s13, putative n=1 Tax=Filobasidiella neoformans RepID=Q5K8M7_CRYNE Length = 194 Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 42/155 (27%), Positives = 61/155 (39%), Gaps = 48/155 (30%) Query: 4 IAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTL------- 56 + G N+PDHK IAL + YG+ S +L GI + +++L+E Q+ L Sbjct: 3 LLGHNLPDHKPLKIALLTFYGISHALSARLLPRLGIHSEATVAQLTEPQVTALSAYLSSP 62 Query: 57 -----------------------------------------RDEVAKFVVEGDLRREISM 75 D + +E + RR + Sbjct: 63 STTARPSEQQIELAPPGGKVLKPVGHPAIFGELNKGKGKGQEDPLDDLKIETEKRRAMQA 122 Query: 76 SIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 I L +G YRG RH G PV GQRT+TNA++ K Sbjct: 123 DIAHLRMVGTYRGRRHAAGYPVHGQRTQTNAKSAK 157 >UniRef50_Q6CFI9 YALI0B06578p n=3 Tax=Saccharomycetales RepID=Q6CFI9_YARLI Length = 156 Score = 61.6 bits (148), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 55/88 (62%), Gaps = 1/88 (1%) Query: 22 IYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKFV-VEGDLRREISMSIKRL 80 ++GVG ++K + A G+ +++ EL++G I + E++ V +E DL ++I+ I+R Sbjct: 24 VFGVGPFQAKRLCAKIGLYPGMRMGELTQGDIMAIVKELSTNVTIESDLAKKINADIERK 83 Query: 81 MDLGCYRGLRHRRGLPVRGQRTKTNART 108 G Y G RH G+PV+GQ+T+TN + Sbjct: 84 RKTGSYVGRRHVMGMPVKGQKTRTNGKN 111 >UniRef50_A8J3J1 Mitochondrial ribosomal protein S13 n=1 Tax=Chlamydomonas reinhardtii RepID=A8J3J1_CHLRE Length = 124 Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 61/106 (57%), Gaps = 1/106 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 MA+I + + H IAL ++G+GK+ S A+ A GI++D+K+ ++ + I + + Sbjct: 1 MAQIQRVALFPHATFHIALARVFGLGKSTSLAVSEACGISKDLKVKDVKDSYIQKVTAYI 60 Query: 61 -AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTN 105 A FV L+R++ ++ + + RG+RH GLPV +T++N Sbjct: 61 EANFVTGDTLKRQVRENVLEEVAINSRRGVRHTLGLPVSSAQTRSN 106 >UniRef50_A4BF40 30S ribosomal protein S13 (Fragment) n=4 Tax=cellular organisms RepID=A4BF40_9GAMM Length = 35 Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 28/35 (80%), Positives = 31/35 (88%) Query: 84 GCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIKK 118 G YRG+RHRR LPVRGQ TK NARTRKGP+KPIK+ Sbjct: 1 GLYRGIRHRRNLPVRGQNTKNNARTRKGPKKPIKR 35 >UniRef50_Q8M0B4 Ribosomal protein S13 n=1 Tax=Amoebidium parasiticum RepID=Q8M0B4_AMOPA Length = 130 Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%) Query: 22 IYGVGKTRSKAILAAAGIAEDVK--ISELSEGQIDTLRDEVAKFV-----------VEGD 68 +YG+G+ I G++ + ++ QIDT KF +E + Sbjct: 26 VYGIGEKEYATISVQLGLSSNQGRGVTSYERSQIDTYIKRRMKFTMLITPDFHTKPIEQN 85 Query: 69 LRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNA 106 LR ++ I L ++ Y+G+RH++GLPV GQRTKTNA Sbjct: 86 LRAAMNAKILTLQNIKTYKGIRHKKGLPVNGQRTKTNA 123 >UniRef50_B5SQ48 Ribosomal protein S13 n=2 Tax=unclassified Blastocystis RepID=B5SQ48_9STRA Length = 116 Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 1/96 (1%) Query: 16 VIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKF-VVEGDLRREIS 74 + L IYG+ ++K IL + G +KI L+ + + + K+ ++ DL + Sbjct: 16 LFILNKIYGINTMQAKYILHSLGYNPSMKIKNLTPTNLKSFNMFLTKYYLINNDLHYQFE 75 Query: 75 MSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 + K+ + L Y G+R + LP GQ T +NA T K Sbjct: 76 NNKKQKILLNTYHGVRLKTKLPSHGQNTHSNAHTAK 111 >UniRef50_P54019 30S ribosomal protein S13P n=10 Tax=Euryarchaeota RepID=RS13_METJA Length = 150 Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 27/136 (19%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAA---------------------GI 39 + R++ ++ +K ++AL IYGVG+ ++AI+ A + Sbjct: 9 LIRVSRTDLDGNKKLIMALQDIYGVGEAMARAIVRVAKLDPNKLAGYLTEEEVKKIEEVL 68 Query: 40 AEDVKISELSEGQIDTLRDEVA---KFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLP 96 A+ K + + +D V K V+E DL I RL + CYRG+RH GLP Sbjct: 69 ADPAKFG-IPSWMFNRRKDYVTGEDKHVIESDLMIIKQEDINRLKRIRCYRGIRHELGLP 127 Query: 97 VRGQRTKTNARTRKGP 112 RGQRTK+ R+GP Sbjct: 128 CRGQRTKST--FRRGP 141 >UniRef50_Q9G8U6 Ribosomal protein S13 n=1 Tax=Rhodomonas salina RepID=Q9G8U6_RHDSA Length = 102 Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 2/95 (2%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M RI + K +AL SI+G+G + + + I + K+ LS+GQ+ + ++ Sbjct: 1 MVRIFEKFLNRKKLVFVALRSIFGLGSFQIRLLCNKCDIGSNCKVEHLSQGQVINICKKI 60 Query: 61 --AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRR 93 K VE L+ + IKRL+ + C+RG H++ Sbjct: 61 DQNKLFVESQLKSIVKFDIKRLIMVNCFRGFFHKK 95 >UniRef50_B1L794 30S ribosomal protein n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L794_KORCO Length = 149 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 23/133 (17%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + R+ + K ++ALT + G+ T + IL AGI + + ELS+ + + D V Sbjct: 9 IVRLLNTTLDGTKPVIVALTGVRGISHTLALTILRKAGIHPNRLLGELSDEEYAKIEDVV 68 Query: 61 -----------------------AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPV 97 ++ ++ D+ ++ I + +G ++G+RH GL V Sbjct: 69 NNPHKYGVPWWLMNRQKDYRNNESRILIGDDVNWYMTQDINLMKKIGSWKGIRHELGLKV 128 Query: 98 RGQRTKTNARTRK 110 RGQRTKT R K Sbjct: 129 RGQRTKTTGRVGK 141 >UniRef50_B3H631 Uncharacterized protein At5g14320.2 n=1 Tax=Arabidopsis thaliana RepID=B3H631_ARATH Length = 128 Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 49/79 (62%), Gaps = 1/79 (1%) Query: 2 ARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVA 61 AR+ G+ IP +K +L I+G+G+TR++ IL + E+ +++E ++ LRDEV+ Sbjct: 48 ARVGGVEIPANKRIEYSLQYIHGIGRTRARQILVDLQM-ENKITKDMAEEELIILRDEVS 106 Query: 62 KFVVEGDLRREISMSIKRL 80 K+++EGDL + + L Sbjct: 107 KYMIEGDLVIHFPLHLHTL 125 >UniRef50_A8NES7 Putative uncharacterized protein n=3 Tax=Agaricomycetes RepID=A8NES7_COPC7 Length = 182 Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 4/81 (4%) Query: 30 SKAILAAAGIAEDVKISELSEGQIDTLRDEVAKFVVEGDLRREISMSIKRLMDLGCYRGL 89 ++A++ A +A+ + +L G +D L+ K +E +LRREI +I+ +G Y G Sbjct: 98 AQALIEAKKLAKIEQGVKLGPGYVDPLK----KLKIESELRREIRENIQHQRMIGSYVGR 153 Query: 90 RHRRGLPVRGQRTKTNARTRK 110 RH LPVRGQ T++NA T K Sbjct: 154 RHAMHLPVRGQNTQSNAATAK 174 Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 32/56 (57%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTL 56 M I G+++PD+ A ALT YGVG+ + + A I + K+ +LS Q+ +L Sbjct: 1 MVHILGVHLPDNYLARYALTKFYGVGQKTAHRLCARFQIHDKCKVKDLSPFQVTSL 56 >UniRef50_O27999 30S ribosomal protein S13P n=1 Tax=Archaeoglobus fulgidus RepID=RS13_ARCFU Length = 146 Score = 51.2 bits (121), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 30/133 (22%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + RIA ++ +K + ALT I G+G ++ I+ G+ K+ EL + I+ +V Sbjct: 6 IVRIADTDLDGNKSLMFALTGIKGIGLRAARCIVNELGVDGRAKLGELDDETIE----KV 61 Query: 61 AKFVVE--------------------------GDLRREISMSIKRLMDLGCYRGLRHRRG 94 KFV E D+ + I+RL+ + YRG+RH RG Sbjct: 62 KKFVEEEIESLPSWLLNRRKDPYSGQDLHLLSKDVDFARMLDIERLIKMKAYRGVRHARG 121 Query: 95 LPVRGQRTKTNAR 107 VRGQRT++ R Sbjct: 122 KKVRGQRTRSTGR 134 >UniRef50_Q9G8P6 Ribosomal protein S13 n=1 Tax=Naegleria gruberi RepID=Q9G8P6_NAEGR Length = 163 Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 12/100 (12%) Query: 23 YGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDE------VAKFVVEGD------LR 70 +G+G + +K++ +G+ +++I + ++ + F + L Sbjct: 37 FGIGVSIAKSLCYFSGLHPNLRIHLFLDNYFNSFYSNFYILKRIKYFFLTNKNNLDHFLH 96 Query: 71 REISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 +E+ I L + C +G RH LPVRGQR +TNARTRK Sbjct: 97 KEMISCINVLKTIRCLKGKRHSTFLPVRGQRNRTNARTRK 136 >UniRef50_D1I5P5 Whole genome shotgun sequence of line PN40024, scaffold_151.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D1I5P5_VITVI Length = 912 Score = 50.1 bits (118), Expect = 2e-05, Method: Composition-based stats. Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 23/131 (17%) Query: 3 RIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTL------ 56 R+ N+ + + ALTSI G+G+ + + A + + + ELS +++ L Sbjct: 774 RVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAAELENLMVIVAN 833 Query: 57 -----------------RDEVAKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRG 99 +D VV L ++ ++RL + +RGLRH GL VRG Sbjct: 834 PRQFKIPDWFLNRKKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 893 Query: 100 QRTKTNARTRK 110 Q TKT R K Sbjct: 894 QHTKTTGRRGK 904 >UniRef50_Q9G4D3 Ribosomal protein S13 n=1 Tax=Thraustochytrium aureum RepID=Q9G4D3_9STRA Length = 120 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 5/92 (5%) Query: 24 GVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAK-FVVEGDLRREI----SMSIK 78 +G + K I G++ IS SE Q++ L + K F + E S K Sbjct: 23 SIGPIKIKYIAKITGLSLKTPISLFSESQLEHLSIWIEKNFTGSNCIHTEFLQIKSEEKK 82 Query: 79 RLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 +++ R LR ++GLPVRGQRTKTNA+T K Sbjct: 83 KIIASKSLRSLRFKKGLPVRGQRTKTNAKTAK 114 >UniRef50_Q9HJD6 30S ribosomal protein S13P n=6 Tax=Euryarchaeota RepID=RS13_THEAC Length = 171 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 35/129 (27%), Positives = 60/129 (46%), Gaps = 22/129 (17%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRD-- 58 + RIA ++ + +AL+ + G+G+ I + D KI EL E Q++ LR+ Sbjct: 31 IVRIANKDLNGERLLPLALSDLKGIGERLGYVIAERLDLPIDKKIGELKEEQLEKLREYV 90 Query: 59 EVAKF--------------------VVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVR 98 E ++ +V DL ++ I + + Y+G+RH +G VR Sbjct: 91 EAKEYDLPEWLLNHRREPVTGKNLNLVSTDLEIQVQEDINLMKKIRSYKGIRHEKGKKVR 150 Query: 99 GQRTKTNAR 107 GQRT++N R Sbjct: 151 GQRTRSNGR 159 >UniRef50_Q2NFZ3 30S ribosomal protein S13P n=9 Tax=Euryarchaeota RepID=RS13_METST Length = 153 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 23/130 (17%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEG---QIDTLR 57 M RI ++ + ALT I G+GK + AI + +D +I + + QI+ + Sbjct: 9 MVRITRKDVDGNSTIATALTEIRGIGKAFAIAICKVLDLDQDAQIGYIDDESVKQIEAVL 68 Query: 58 DEVAKF--------------------VVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPV 97 + +F ++E DL + + R+ + Y+G RH GLPV Sbjct: 69 ENPQEFGIPEWFLNRRNDYETGETKHLIESDLNMTLRDDLNRMKMIRSYKGKRHEVGLPV 128 Query: 98 RGQRTKTNAR 107 RGQRTK+ R Sbjct: 129 RGQRTKSTFR 138 >UniRef50_Q9G904 Ribosomal protein S13 n=1 Tax=Ochromonas danica RepID=Q9G904_OCHDN Length = 125 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 48/91 (52%) Query: 18 ALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKFVVEGDLRREISMSI 77 + +IYG+ K ++K + G LS + + L +A F + L+ +I Sbjct: 4 STNNIYGIKKIKNKFVERQLGYNIFSHKHALSIYKDELLNTFLAGFKQDRVLKEFDKKNI 63 Query: 78 KRLMDLGCYRGLRHRRGLPVRGQRTKTNART 108 L++ YRG RH++ LPVRGQRT TNA+T Sbjct: 64 DFLINNKSYRGSRHKKHLPVRGQRTHTNAKT 94 >UniRef50_D1J904 30S ribosomal protein n=1 Tax=uncultured archaeon RepID=D1J904_9ARCH Length = 167 Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 22/129 (17%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDE- 59 RI ++ ++ +L + G+G+ ++ ++ +AGI K+ LS+ +++ L+ Sbjct: 15 FVRILDTDLDGKRNVADSLCGVNGIGRRIAETLVRSAGIDSKGKMGNLSDDEVERLKTAI 74 Query: 60 ---------------------VAKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVR 98 V K ++ DL + I L + YRG+RH RGL VR Sbjct: 75 NSAEKRLPQWMFNRRKDINTGVDKHIMGTDLALKFRDDINLLRKIRSYRGIRHERGLKVR 134 Query: 99 GQRTKTNAR 107 GQRTK R Sbjct: 135 GQRTKATGR 143 >UniRef50_P41094 40S ribosomal protein S18 n=266 Tax=Eukaryota RepID=RS18_DROME Length = 152 Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 23/130 (17%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDT----- 55 + RI NI + IA+T+I GVG+ S +L A + + E +E ++D Sbjct: 12 ILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTII 71 Query: 56 ---LRDEVAKF-------VVEG--------DLRREISMSIKRLMDLGCYRGLRHRRGLPV 97 L+ +V + +++G +L ++ ++RL + +RGLRH GL V Sbjct: 72 SNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 131 Query: 98 RGQRTKTNAR 107 RGQ TKT R Sbjct: 132 RGQHTKTTGR 141 >UniRef50_C7NZ06 30S ribosomal protein n=3 Tax=Halobacteriaceae RepID=C7NZ06_HALMD Length = 178 Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 22/130 (16%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTL---- 56 RI ++ K +LT + G+GK ++ I AG+ L + I+ + Sbjct: 20 FVRIGQTDLDGTKSVERSLTDMNGIGKRAARIIAEKAGVDRQALFGALDDEDIEAVVEKV 79 Query: 57 ---RDEVAKFVVE---------------GDLRREISMSIKRLMDLGCYRGLRHRRGLPVR 98 DEV +++ DL+ + + R+ + Y+G+RH+RG VR Sbjct: 80 EGYADEVPEWLTNHQNDFYSGETTHEIGNDLQMQRRADVNRMQMIDSYKGVRHKRGQKVR 139 Query: 99 GQRTKTNART 108 GQRTK+ RT Sbjct: 140 GQRTKSTGRT 149 >UniRef50_Q18G53 30S ribosomal protein S13P n=8 Tax=Halobacteriaceae RepID=RS13_HALWD Length = 173 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 54/130 (41%), Gaps = 22/130 (16%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 RI ++ K +LT + G+GK ++ I A + L E +ID++ D V Sbjct: 21 FVRIGTTDLDGTKAVERSLTDMKGIGKRTARIITDVASVDRHATFGLLEEDEIDSITDAV 80 Query: 61 AKF--------------VVEGD--------LRREISMSIKRLMDLGCYRGLRHRRGLPVR 98 GD L + + R+ + Y+G+RH+RG VR Sbjct: 81 ENLDDHIPGWMTNRREDFFSGDTDHKTGADLEEKRRHDVNRMKMIDSYKGVRHKRGQKVR 140 Query: 99 GQRTKTNART 108 GQRTK+ RT Sbjct: 141 GQRTKSTGRT 150 >UniRef50_A0RY01 30S ribosomal protein S13P n=4 Tax=Thaumarchaeota RepID=RS13_CENSY Length = 227 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 23/130 (17%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDT----L 56 + RI G ++P K AV+ L I G+G + AIL I + I L++ Q+ + L Sbjct: 54 IVRILGNDLPGEKKAVVGLRQIRGIGYGFATAILDVLKIDNNSNIGYLTDEQVASIEKLL 113 Query: 57 RDEVA-------------------KFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPV 97 +D + + D+ + ++R G ++G RH GL V Sbjct: 114 QDPAGAGFPTWFLNRRKDLETGEDRHIFTSDIEFTVRNDVERERVSGSWKGYRHMFGLKV 173 Query: 98 RGQRTKTNAR 107 RGQRT+ R Sbjct: 174 RGQRTRNTGR 183 >UniRef50_Q09F78 Ribosomal protein S13 n=5 Tax=Tetrahymena RepID=Q09F78_TETPR Length = 276 Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 26/36 (72%) Query: 73 ISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNART 108 +++I L + YRGLRH +GLPVRGQRT TNA + Sbjct: 77 FNINIFFLDFMNTYRGLRHSKGLPVRGQRTWTNAWS 112 >UniRef50_Q0W1V6 30S ribosomal protein S13P n=4 Tax=Euryarchaeota RepID=RS13_UNCMA Length = 224 Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 59/130 (45%), Gaps = 22/130 (16%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLR--- 57 + RIA ++ + ALT I G+G SK I A + + L Q+D LR Sbjct: 72 IVRIANTDLDGTQTVEFALTGIKGIGNRISKIIARQAQVDPHATMGYLPPEQVDKLRAVI 131 Query: 58 DEVAKFVVEGDLRR---------------EISMSIKRLMDLG----CYRGLRHRRGLPVR 98 D + V L R +++M++K +++ Y+G+RH RG VR Sbjct: 132 DNLEANVPVWMLNRRRDIYTGEDKHLYGVDLTMAVKEDINIMKKIRSYKGIRHERGQKVR 191 Query: 99 GQRTKTNART 108 GQRTK+ RT Sbjct: 192 GQRTKSTGRT 201 >UniRef50_P62269 40S ribosomal protein S18 n=58 Tax=Coelomata RepID=RS18_HUMAN Length = 152 Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 23/130 (17%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQID------ 54 + R+ NI + A+T+I GVG+ + +L A I + EL+E +++ Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71 Query: 55 -----------------TLRDEVAKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPV 97 ++D V+ L ++ ++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131 Query: 98 RGQRTKTNAR 107 RGQ TKT R Sbjct: 132 RGQHTKTTGR 141 >UniRef50_Q46GC7 30S ribosomal protein S13P n=9 Tax=Methanomicrobia RepID=RS13_METBF Length = 162 Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 54/129 (41%), Gaps = 22/129 (17%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + RI ++ K ALT + G+G+ + I AG+ + L + ++ L + Sbjct: 23 LVRIMNTDLKGAKPVEYALTGLPGIGRRTAILIAKGAGVDPTATLGYLPDEEVAKLDRAI 82 Query: 61 AKF---VVEGDLRREISMS-------------------IKRLMDLGCYRGLRHRRGLPVR 98 F V L R+ ++ I L + YRGLRH RGL VR Sbjct: 83 GNFEGIVPSWMLNRQKDLATGQDKHLLGTDILLTFREDINNLKKVRAYRGLRHERGLKVR 142 Query: 99 GQRTKTNAR 107 GQRTK+ R Sbjct: 143 GQRTKSTGR 151 >UniRef50_A6RYD3 Putative uncharacterized protein n=1 Tax=Botryotinia fuckeliana B05.10 RepID=A6RYD3_BOTFB Length = 82 Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 21/44 (47%), Positives = 30/44 (68%) Query: 65 VEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNART 108 +E +L+R + +I+R+ +G YRG RH GLPVRGQ TK+ T Sbjct: 3 LETELKRRLQDNIERMRTMGSYRGRRHAMGLPVRGQNTKSQIST 46 >UniRef50_D2EFK4 30S ribosomal protein n=2 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EFK4_9EURY Length = 179 Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 32/127 (25%), Positives = 56/127 (44%), Gaps = 23/127 (18%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTL---- 56 + RIA ++ K L SI G+G + S A++ I E K+ +L E Q++ L Sbjct: 26 IVRIADTDLDGSKKVKDLLRSITGIGFSYSNALMKVLKIPEGEKLQDLDEKQLNELKEAL 85 Query: 57 ----------------RDEVAKF---VVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPV 97 RDE ++ +LR + +M I+++ Y+G RH + Sbjct: 86 SNPFKYKLPHWLFNWRRDETTGLDYHLLSNELRSKTTMQIQKIKTSRSYKGYRHSFSYKL 145 Query: 98 RGQRTKT 104 RGQ+ ++ Sbjct: 146 RGQKVRS 152 >UniRef50_P46760 Ribosomal protein S13, mitochondrial n=1 Tax=Acanthamoeba castellanii RepID=RT13_ACACA Length = 119 Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust. Identities = 21/33 (63%), Positives = 23/33 (69%), Gaps = 3/33 (9%) Query: 86 YRGLRHRRGLPVRGQRTKTNARTRKGPRKPIKK 118 Y G+RH LPVRGQRT TNA+T P K IKK Sbjct: 88 YTGMRHILKLPVRGQRTHTNAKT---PSKNIKK 117 >UniRef50_D1Z0V5 30S ribosomal protein S13P n=1 Tax=Methanocella paludicola SANAE RepID=D1Z0V5_METPS Length = 225 Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 53/130 (40%), Gaps = 22/130 (16%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + RI ++ + ALT I G+G SK + A + + + L Q+D LR+ + Sbjct: 71 LVRIQNTDLDGTSKVLYALTGIKGIGIRVSKMLARKAEVDPNAIMGYLPPEQVDRLRNAL 130 Query: 61 A----------------------KFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVR 98 + + DL I + + Y+G+RH RG VR Sbjct: 131 ENIDTNMPVWMLNRRNDTYTGENRHLTGTDLILSNKEDINLMKKIRSYKGIRHERGQKVR 190 Query: 99 GQRTKTNART 108 GQRT++ RT Sbjct: 191 GQRTRSTGRT 200 >UniRef50_B3T3X1 Putative ribosomal protein S13/S18 n=1 Tax=uncultured marine microorganism HF4000_ANIW133F6 RepID=B3T3X1_9ZZZZ Length = 155 Score = 40.8 bits (94), Expect = 0.012, Method: Compositional matrix adjust. Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 22/128 (17%) Query: 3 RIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAK 62 R+A +I + LTSI GVG+ + + + A I L++ + D +R + + Sbjct: 18 RLADSDIDGLRPIAQGLTSIGGVGQRTAIQLCSMADIDGTKLGGHLTDEEQDRIRSTIDE 77 Query: 63 FVV---------EGDLRR---------EISMSIK----RLMDLGCYRGLRHRRGLPVRGQ 100 + + + DL+ E+ +++K RL + YRG+RHR G VRGQ Sbjct: 78 YALNVPWWLVNRQRDLQSNEDAHIIGMEVKLTLKDDISRLASIKTYRGIRHRSGHKVRGQ 137 Query: 101 RTKTNART 108 R ++N R+ Sbjct: 138 RLRSNGRS 145 >UniRef50_Q6LXN1 30S ribosomal protein S13P n=7 Tax=Methanococcus RepID=RS13_METMP Length = 149 Score = 39.7 bits (91), Expect = 0.027, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 27/46 (58%) Query: 62 KFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNAR 107 K ++E DL + I + + CY+G+RH LP RGQRT+ + R Sbjct: 93 KHLIETDLVLTVQEDITNMKKIRCYKGIRHELRLPCRGQRTRGSFR 138 >UniRef50_B7XLD6 SSU ribosomal protein S13P n=2 Tax=Enterocytozoon bieneusi H348 RepID=B7XLD6_ENTBH Length = 161 Score = 39.3 bits (90), Expect = 0.036, Method: Compositional matrix adjust. Identities = 39/133 (29%), Positives = 55/133 (41%), Gaps = 31/133 (23%) Query: 3 RIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLR---DE 59 R+ NI K V ALT I G+G +KA + AG+ ELS +I +++ DE Sbjct: 23 RLYNTNIDGTKKIVFALTRIRGLGMRFAKAAVLRAGVDPSKFAGELSPEEIASIQNVIDE 82 Query: 60 VAKFVV------------------------EGDLRREISMSIKRLMDLGCYRGLRHRRGL 95 K+ + +GDLR M I++ RG R GL Sbjct: 83 PLKYSIPEYFLNHQKDSVTGEDEHLVGIKLDGDLR----MLIEKAKKFKEIRGCRLAMGL 138 Query: 96 PVRGQRTKTNART 108 GQRT++N R Sbjct: 139 KCNGQRTRSNGRN 151 >UniRef50_A0SNY5 30S ribosomal protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=A0SNY5_9EURY Length = 177 Score = 38.1 bits (87), Expect = 0.083, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 27/118 (22%) Query: 18 ALTSIYGVGKTRSKA----ILAAAGIAEDVKISELSEGQI--------DTLRDEVAKFVV 65 AL + G+G+T S + I I I L+E Q+ D + V K+++ Sbjct: 36 ALDQVKGIGQTMSHSLSYVIEHKFNIDPSTPIGSLNESQVTQVEELIKDPHKYGVPKYLL 95 Query: 66 E---------------GDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNART 108 DL + SI R + L +RG RH+ G VRGQ T++ RT Sbjct: 96 NRRNDMDTGKDMHLIGNDLIFAVRQSINRDVTLRVWRGYRHQYGQKVRGQHTRSTGRT 153 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_O59772 37S ribosomal protein subunit sws2, mitochondria... 147 9e-35 UniRef50_Q1GK06 30S ribosomal protein S13 n=21 Tax=Bacteria RepI... 146 1e-34 UniRef50_Q11HS4 30S ribosomal protein S13 n=5 Tax=Proteobacteria... 146 2e-34 UniRef50_A5FRW9 30S ribosomal protein S13 n=691 Tax=cellular org... 146 3e-34 UniRef50_Q2JL76 30S ribosomal protein S13 n=276 Tax=cellular org... 144 5e-34 UniRef50_C1FF43 Ribosomal protein S13, chloroplast n=2 Tax=Micro... 144 1e-33 UniRef50_B3DVZ3 30S ribosomal protein S13 n=5 Tax=Chlamydiae/Ver... 141 6e-33 UniRef50_A8F4T6 30S ribosomal protein S13 n=40 Tax=cellular orga... 140 1e-32 UniRef50_A8JDP6 Plastid ribosomal protein S13 n=3 Tax=Viridiplan... 140 1e-32 UniRef50_B1AIP4 30S ribosomal protein S13 n=703 Tax=cellular org... 139 2e-32 UniRef50_P26872 Ribosomal protein S13, mitochondrial n=3 Tax=Vir... 135 4e-31 UniRef50_P42732 30S ribosomal protein S13, chloroplastic n=11 Ta... 132 3e-30 UniRef50_Q2GEB8 30S ribosomal protein S13 n=3 Tax=Proteobacteria... 131 5e-30 UniRef50_A8GVD5 30S ribosomal protein S13 n=54 Tax=Bacteria RepI... 130 2e-29 UniRef50_O21258 Ribosomal protein S13 n=1 Tax=Reclinomonas ameri... 128 6e-29 UniRef50_P46747 Ribosomal protein S13, mitochondrial n=1 Tax=Pro... 126 2e-28 UniRef50_Q601J1 30S ribosomal protein S13 n=8 Tax=Bacteria RepID... 126 3e-28 UniRef50_B0CSU7 Predicted protein n=1 Tax=Laccaria bicolor S238N... 124 6e-28 UniRef50_P53937 37S ribosomal protein SWS2, mitochondrial n=13 T... 124 6e-28 UniRef50_B0JY40 30S ribosomal protein S13 n=138 Tax=cellular org... 124 9e-28 UniRef50_A0T0J8 30S ribosomal protein S13, chloroplastic n=2 Tax... 123 1e-27 UniRef50_Q0UWA4 Putative uncharacterized protein n=1 Tax=Phaeosp... 123 2e-27 UniRef50_Q0QIP8 Ribosomal protein S13 n=1 Tax=Oltmannsiellopsis ... 121 6e-27 UniRef50_A6YEC0 Ribosomal protein S13 n=1 Tax=Chlorokybus atmoph... 121 8e-27 UniRef50_C8V8H2 40S ribosomal protein S13 (AFU_orthologue; AFUA_... 121 9e-27 UniRef50_D1I5P5 Whole genome shotgun sequence of line PN40024, s... 120 1e-26 UniRef50_C0QW17 30S ribosomal protein S13 n=2 Tax=Brachyspira Re... 119 2e-26 UniRef50_A3LSH2 Predicted protein n=4 Tax=Saccharomycetaceae Rep... 118 4e-26 UniRef50_C5DMG2 KLTH0G08646p n=2 Tax=Saccharomycetaceae RepID=C5... 118 5e-26 UniRef50_Q8LPW2 Small ribosomal subunit protein S13, mitochondri... 118 6e-26 UniRef50_Q8M1G5 Ribosomal protein S13 n=1 Tax=Chaetosphaeridium ... 117 9e-26 UniRef50_Q2TUB5 Ribosomal protein S13 n=1 Tax=Dictyota dichotoma... 117 1e-25 UniRef50_Q3S2A2 Ribosomal protein S13 n=1 Tax=Thalassiosira pseu... 116 2e-25 UniRef50_B2MWT5 Ribosomal protein S13 n=1 Tax=Hemiselmis anderse... 116 2e-25 UniRef50_C1KRH7 Ribosomal protein S13 n=2 Tax=Micromonas RepID=C... 115 4e-25 UniRef50_Q9CA19 Small ribosomal subunit protein S13, mitochondri... 115 4e-25 UniRef50_B2B6R1 Predicted CDS Pa_2_8560 n=1 Tax=Podospora anseri... 114 1e-24 UniRef50_Q74M95 30S ribosomal protein S13P n=1 Tax=Nanoarchaeum ... 113 1e-24 UniRef50_B0BLG5 Ribosomal protein S13 n=3 Tax=Embryophyta RepID=... 113 2e-24 UniRef50_C6UN26 30S ribosomal protein n=1 Tax=Candidatus Hodgkin... 112 2e-24 UniRef50_B6JWK5 Mitochondrial 37S ribosomal protein SWS2 n=1 Tax... 112 2e-24 UniRef50_P08977 Ribosomal protein S13, mitochondrial n=165 Tax=E... 112 5e-24 UniRef50_Q6UVP6 Ribosomal protein S13 n=1 Tax=Pseudendoclonium a... 111 1e-23 UniRef50_Q0W1V6 30S ribosomal protein S13P n=4 Tax=Euryarchaeota... 110 2e-23 UniRef50_Q0P3I6 Rps13 n=1 Tax=Ostreococcus tauri RepID=Q0P3I6_OSTTA 109 2e-23 UniRef50_Q9G886 Ribosomal protein S13 n=1 Tax=Malawimonas jakobi... 109 3e-23 UniRef50_Q0DPA4 Os03g0704000 protein n=1 Tax=Oryza sativa Japoni... 108 5e-23 UniRef50_Q46GC7 30S ribosomal protein S13P n=9 Tax=Methanomicrob... 108 6e-23 UniRef50_Q2TUF4 Ribosomal protein S13 n=11 Tax=Phaeophyceae RepI... 108 6e-23 UniRef50_Q5MF08 Ribosomal protein S13 (Fragment) n=2 Tax=Magnoli... 107 1e-22 UniRef50_A5E736 Putative uncharacterized protein n=1 Tax=Loddero... 107 1e-22 UniRef50_Q6CFI9 YALI0B06578p n=3 Tax=Saccharomycetales RepID=Q6C... 107 2e-22 UniRef50_C7NZ06 30S ribosomal protein n=3 Tax=Halobacteriaceae R... 106 2e-22 UniRef50_Q2NFZ3 30S ribosomal protein S13P n=9 Tax=Euryarchaeota... 106 2e-22 UniRef50_B1L794 30S ribosomal protein n=1 Tax=Candidatus Korarch... 106 3e-22 UniRef50_B6HVE9 Pc22g19050 protein n=20 Tax=Leotiomyceta RepID=B... 105 4e-22 UniRef50_Q6E792 Ribosomal protein S13 n=1 Tax=Saprolegnia ferax ... 105 4e-22 UniRef50_Q18G53 30S ribosomal protein S13P n=8 Tax=Halobacteriac... 104 1e-21 UniRef50_A4ZHE7 Ribosomal protein S13 n=4 Tax=Phytophthora RepID... 104 1e-21 UniRef50_O27999 30S ribosomal protein S13P n=1 Tax=Archaeoglobus... 103 2e-21 UniRef50_Q5K8M7 30s ribosomal protein s13, putative n=1 Tax=Filo... 103 2e-21 UniRef50_Q05FK2 30S ribosomal protein S13 n=1 Tax=Candidatus Car... 103 2e-21 UniRef50_P54019 30S ribosomal protein S13P n=10 Tax=Euryarchaeot... 102 3e-21 UniRef50_A0RY01 30S ribosomal protein S13P n=4 Tax=Thaumarchaeot... 102 3e-21 UniRef50_C1GA05 40S ribosomal protein S13 n=4 Tax=Onygenales Rep... 102 5e-21 UniRef50_D2JP71 Ribosomal protein S13 n=1 Tax=Synedra acus RepID... 102 5e-21 UniRef50_D1J904 30S ribosomal protein n=1 Tax=uncultured archaeo... 99 4e-20 UniRef50_A8J3J1 Mitochondrial ribosomal protein S13 n=1 Tax=Chla... 98 9e-20 UniRef50_Q8W9S0 Ribosomal protein S13 n=1 Tax=Mesostigma viride ... 98 1e-19 UniRef50_Q9HJD6 30S ribosomal protein S13P n=6 Tax=Euryarchaeota... 97 2e-19 UniRef50_P41094 40S ribosomal protein S18 n=266 Tax=Eukaryota Re... 96 2e-19 UniRef50_P62269 40S ribosomal protein S18 n=58 Tax=Coelomata Rep... 92 4e-18 UniRef50_B5SQ48 Ribosomal protein S13 n=2 Tax=unclassified Blast... 90 2e-17 UniRef50_Q9G8U6 Ribosomal protein S13 n=1 Tax=Rhodomonas salina ... 86 4e-16 UniRef50_A8NES7 Putative uncharacterized protein n=3 Tax=Agarico... 85 5e-16 UniRef50_D2EFK4 30S ribosomal protein n=2 Tax=Candidatus Parvarc... 85 6e-16 UniRef50_B3H631 Uncharacterized protein At5g14320.2 n=1 Tax=Arab... 81 8e-15 UniRef50_Q9G904 Ribosomal protein S13 n=1 Tax=Ochromonas danica ... 79 5e-14 UniRef50_Q9G8P6 Ribosomal protein S13 n=1 Tax=Naegleria gruberi ... 78 1e-13 UniRef50_Q9G4D3 Ribosomal protein S13 n=1 Tax=Thraustochytrium a... 73 3e-12 UniRef50_Q8M0B4 Ribosomal protein S13 n=1 Tax=Amoebidium parasit... 70 3e-11 UniRef50_A6RYD3 Putative uncharacterized protein n=1 Tax=Botryot... 64 1e-09 UniRef50_Q09F78 Ribosomal protein S13 n=5 Tax=Tetrahymena RepID=... 58 7e-08 UniRef50_A4BF40 30S ribosomal protein S13 (Fragment) n=4 Tax=cel... 50 3e-05 Sequences not found previously or not previously below threshold: UniRef50_A3MUT0 30S ribosomal protein S13P n=7 Tax=Thermoprotei ... 104 1e-21 UniRef50_D1Z0V5 30S ribosomal protein S13P n=1 Tax=Methanocella ... 101 1e-20 UniRef50_Q4Q1Y3 40S ribosomal protein S18, putative n=2 Tax=Euka... 98 1e-19 UniRef50_Q6LXN1 30S ribosomal protein S13P n=7 Tax=Methanococcus... 94 2e-18 UniRef50_A1RWT9 30S ribosomal protein S13P n=17 Tax=Archaea RepI... 89 3e-17 UniRef50_B3T3X1 Putative ribosomal protein S13/S18 n=1 Tax=uncul... 88 6e-17 UniRef50_Q8SRP2 40S ribosomal protein S18 n=1 Tax=Encephalitozoo... 86 4e-16 UniRef50_A2E0E1 Ribosomal protein S13p/S18e, putative n=3 Tax=Tr... 86 5e-16 UniRef50_A0SNY5 30S ribosomal protein n=1 Tax=Candidatus Micrarc... 81 1e-14 UniRef50_B7XLD6 SSU ribosomal protein S13P n=2 Tax=Enterocytozoo... 80 2e-14 UniRef50_C4V7B3 Putative uncharacterized protein n=1 Tax=Nosema ... 78 6e-14 UniRef50_B8D6G1 30S ribosomal protein n=1 Tax=Desulfurococcus ka... 74 9e-13 UniRef50_A8BZ58 Ribosomal protein S18 n=2 Tax=Giardia intestinal... 73 3e-12 UniRef50_A0EBZ1 Chromosome undetermined scaffold_89, whole genom... 69 4e-11 UniRef50_B7P1K9 40S ribosomal protein S18, putative (Fragment) n... 66 3e-10 UniRef50_Q3LW54 Ribosomal protein S18 n=1 Tax=Bigelowiella natan... 64 2e-09 UniRef50_C0PQ42 Putative uncharacterized protein n=1 Tax=Picea s... 63 2e-09 UniRef50_Q8H583 Ribosomal protein S18-like n=2 Tax=Eukaryota Rep... 61 9e-09 UniRef50_P46760 Ribosomal protein S13, mitochondrial n=1 Tax=Aca... 59 3e-08 UniRef50_C0S1M2 40S ribosomal protein S13 n=1 Tax=Paracoccidioid... 56 5e-07 UniRef50_Q8HIT6 Ribosomal protein S13 n=1 Tax=Monosiga brevicoll... 52 4e-06 UniRef50_P15609 Uncharacterized mitochondrial protein ORF8 n=2 T... 44 0.001 UniRef50_B9GT74 Predicted protein n=1 Tax=Populus trichocarpa Re... 44 0.001 UniRef50_Q9MGA5 Ribosomal protein S13 n=1 Tax=Chrysodidymus synu... 42 0.005 UniRef50_Q4V607 IP07925p (Fragment) n=10 Tax=Sophophora RepID=Q4... 42 0.008 UniRef50_A9RXP3 Predicted protein (Fragment) n=1 Tax=Physcomitre... 41 0.009 UniRef50_B2XX55 Ribosomal protein S13 n=1 Tax=Polysphondylium pa... 41 0.013 UniRef50_Q2LCP2 Ribosomal protein S13, mitochondrial n=2 Tax=Dic... 40 0.020 UniRef50_Q182T2 Fibronectin-binding protein n=8 Tax=Clostridium ... 40 0.027 UniRef50_C3NHT6 Type 2 DNA topoisomerase 6 subunit B n=14 Tax=Th... 40 0.027 UniRef50_C6DW13 Formamidopyrimidine-DNA glycosylase n=14 Tax=Act... 39 0.032 UniRef50_B2XXA3 Ribosomal protein S13 n=2 Tax=Dictyosteliida Rep... 39 0.037 UniRef50_Q45T02 Fibronectin binding protein (Fragment) n=9 Tax=C... 39 0.039 UniRef50_D0U5Z3 Ribosomal protein S13/S18 n=1 Tax=uncultured act... 39 0.045 UniRef50_A8ABG5 DNA topoisomerase VI, B subunit n=1 Tax=Ignicocc... 39 0.052 UniRef50_A4YHK7 Type 2 DNA topoisomerase 6 subunit B n=3 Tax=The... 38 0.074 >UniRef50_O59772 37S ribosomal protein subunit sws2, mitochondrial n=1 Tax=Schizosaccharomyces pombe RepID=SWS2_SCHPO Length = 151 Score = 147 bits (372), Expect = 9e-35, Method: Composition-based stats. Identities = 46/118 (38%), Positives = 70/118 (59%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M I G+ + D K AL S YG+G +++ I A +++ EL+ Q+ TL + Sbjct: 1 MVYILGVAVNDDKPVRFALLSFYGIGHAKAEEICAKLSFHNTLRVRELTNVQLTTLSQLL 60 Query: 61 AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIKK 118 + +EGDLRR+ + I RL+++ CYRG+RH GLPV GQ T+TNA+T K K ++ Sbjct: 61 SGMTIEGDLRRQRNADISRLVNIRCYRGMRHVNGLPVNGQNTRTNAKTAKKLNKVPRR 118 >UniRef50_Q1GK06 30S ribosomal protein S13 n=21 Tax=Bacteria RepID=RS13_SILST Length = 122 Score = 146 bits (370), Expect = 1e-34, Method: Composition-based stats. Identities = 72/117 (61%), Positives = 87/117 (74%), Gaps = 1/117 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 MARIAG+NIP K IALT I G+G +KAI A I +++ELS+ ++ +R+ + Sbjct: 1 MARIAGVNIPTAKRVPIALTYITGIGPASAKAICEAVNIDATRRVNELSDAEVLAIREHI 60 Query: 61 -AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 A + VEGDLRRE+ M+IKRLMDLGCYRGLRHRR LPVRGQRT TNARTRKGP K I Sbjct: 61 DATYTVEGDLRREVQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAI 117 >UniRef50_Q11HS4 30S ribosomal protein S13 n=5 Tax=Proteobacteria RepID=RS13_MESSB Length = 122 Score = 146 bits (369), Expect = 2e-34, Method: Composition-based stats. Identities = 70/117 (59%), Positives = 92/117 (78%), Gaps = 1/117 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 MARIAG+NIP +K VIAL I+G+G ++ I + GI +D ++ +L++ ++ +R+ + Sbjct: 1 MARIAGVNIPTNKRVVIALQYIHGIGPKLAREITSKVGIPDDRRVHQLTDAEVLAIREAI 60 Query: 61 AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 + + VEGDLRRE+SM+IKRLMDLGCYRGLRHRR LPVRGQRT TNARTRKGP KPI Sbjct: 61 DRDYQVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKPI 117 >UniRef50_A5FRW9 30S ribosomal protein S13 n=691 Tax=cellular organisms RepID=RS13_DEHSB Length = 129 Score = 146 bits (368), Expect = 3e-34, Method: Composition-based stats. Identities = 62/117 (52%), Positives = 93/117 (79%), Gaps = 1/117 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M RIAG +IPD+K +L I+G+G RS+ +L AG+ + +++++L++ +I+ LR+ + Sbjct: 1 MVRIAGTDIPDNKQVYFSLQYIFGIGPARSEKVLVQAGVDKTIRVNKLTDEEINRLREII 60 Query: 61 AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 K + VEGDLR+EI+++IKRL+D+GCYRG+RH+ LPVRGQRTKTNARTR+GPRK + Sbjct: 61 DKEYRVEGDLRKEITLNIKRLIDIGCYRGIRHKHNLPVRGQRTKTNARTRRGPRKTV 117 >UniRef50_Q2JL76 30S ribosomal protein S13 n=276 Tax=cellular organisms RepID=RS13_SYNJB Length = 127 Score = 144 bits (365), Expect = 5e-34, Method: Composition-based stats. Identities = 69/117 (58%), Positives = 88/117 (75%), Gaps = 1/117 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 MARIAG++IP K IALT IYG+G TRS+ ILA GI D + +L++ ++ LR V Sbjct: 1 MARIAGVDIPREKRVEIALTYIYGIGLTRSRQILAKTGINPDTRTRDLTDAEVAALRTVV 60 Query: 61 A-KFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 ++ VEGDLRR+ +M+IKRL+D+G YRG RHR GLPVRGQRT+TNARTRKG RK + Sbjct: 61 EGEYQVEGDLRRQEAMNIKRLIDIGTYRGRRHRLGLPVRGQRTRTNARTRKGVRKTV 117 >UniRef50_C1FF43 Ribosomal protein S13, chloroplast n=2 Tax=Micromonas RepID=C1FF43_9CHLO Length = 176 Score = 144 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 63/115 (54%), Positives = 85/115 (73%), Gaps = 1/115 (0%) Query: 2 ARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVA 61 AR+AG+ IP++K A IALT +YG+G T +K I+A G+ E+ ++ E E ++ LR EV Sbjct: 58 ARVAGVEIPNNKKAEIALTYVYGIGNTTAKKIMAKTGL-ENKRVREFEEEELTILRAEVD 116 Query: 62 KFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 +++EGDLRR ++IKRL ++ CYRG RH RGLPVRGQRTKTNARTRKG K + Sbjct: 117 TYMIEGDLRRFNMLNIKRLKEIQCYRGRRHIRGLPVRGQRTKTNARTRKGKVKTV 171 >UniRef50_B3DVZ3 30S ribosomal protein S13 n=5 Tax=Chlamydiae/Verrucomicrobia group RepID=RS13_METI4 Length = 131 Score = 141 bits (356), Expect = 6e-33, Method: Composition-based stats. Identities = 64/118 (54%), Positives = 83/118 (70%), Gaps = 2/118 (1%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 MARI G+ IP +K + AL IYG+G++R+K I A + ++ +L+ QI+ + + Sbjct: 1 MARILGVEIPGNKPLISALPVIYGIGRSRAKLICEQAELNPQMRAKDLTNQQINRIIQVI 60 Query: 61 AK--FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 + FVVEGDLRREI +IKRL + CYRG+RH RGLPVRGQRT TNARTRKGPRK I Sbjct: 61 EENGFVVEGDLRREIQQNIKRLQSIRCYRGIRHIRGLPVRGQRTSTNARTRKGPRKTI 118 >UniRef50_A8F4T6 30S ribosomal protein S13 n=40 Tax=cellular organisms RepID=RS13_THELT Length = 128 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 58/114 (50%), Positives = 84/114 (73%), Gaps = 1/114 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 MARI G+ +P +K +ALT +YGVG+TR+ IL GI D ++ +L++ ++ + + Sbjct: 1 MARIVGVELPGNKKCFVALTYLYGVGRTRAFEILKNTGINPDKRVKDLTDEEVSKITKFI 60 Query: 61 AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPR 113 + VEG+LR +I+ +IKRL+D+GCYRG RH+ GLPVRGQRT++NARTRKGPR Sbjct: 61 QDHYKVEGELRTDINRNIKRLIDIGCYRGFRHKLGLPVRGQRTRSNARTRKGPR 114 >UniRef50_A8JDP6 Plastid ribosomal protein S13 n=3 Tax=Viridiplantae RepID=A8JDP6_CHLRE Length = 164 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 59/115 (51%), Positives = 80/115 (69%), Gaps = 1/115 (0%) Query: 2 ARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVA 61 R+ + IP+ K ++L I+G+G+T ++ IL G+ E+ K EL+E +I+ LR EV Sbjct: 43 LRVNNVEIPNSKRIEVSLQYIFGIGETTAQTILRDTGV-ENKKTYELNEEEINKLRSEVE 101 Query: 62 KFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 K+ E DLRR ++ +IKRL D+GCYRG RH GLPVRGQRTKTNARTRKG K + Sbjct: 102 KYTTEADLRRVVAQNIKRLKDIGCYRGRRHIMGLPVRGQRTKTNARTRKGKAKTV 156 >UniRef50_B1AIP4 30S ribosomal protein S13 n=703 Tax=cellular organisms RepID=RS13_UREP2 Length = 132 Score = 139 bits (352), Expect = 2e-32, Method: Composition-based stats. Identities = 69/124 (55%), Positives = 92/124 (74%), Gaps = 8/124 (6%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 MARI G++IP+ K VI+LT I+G+GK+ S+ IL A I E++++ +L++ QI +R Sbjct: 1 MARILGVDIPNDKRVVISLTYIFGIGKSTSQQILKLANIDENIRVKDLADEQIAEIRRVA 60 Query: 61 AKFV--------VEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGP 112 FV +EGDLRR ++M IKRLM++G YRG+RHRRGLPVRGQRTKTNARTRKGP Sbjct: 61 LNFVKANGEKLQLEGDLRRTVAMDIKRLMEIGSYRGIRHRRGLPVRGQRTKTNARTRKGP 120 Query: 113 RKPI 116 RK + Sbjct: 121 RKTV 124 >UniRef50_P26872 Ribosomal protein S13, mitochondrial n=3 Tax=Viridiplantae RepID=RT13_MARPO Length = 120 Score = 135 bits (341), Expect = 4e-31, Method: Composition-based stats. Identities = 45/114 (39%), Positives = 75/114 (65%), Gaps = 1/114 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M+ I G N+ +K IALT I+G+G ++ + G+++ +K+++L++ Q D + + Sbjct: 1 MSYILGTNLNSNKQVKIALTRIFGIGPKKAIQVCDQLGLSDTIKVNKLTKYQFDQILKII 60 Query: 61 A-KFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPR 113 + ++V+ +L+R I IKRL+ +GCYRG RH GLP+RGQRT TNA+T + R Sbjct: 61 SQNYLVDSELKRVIQRDIKRLISIGCYRGFRHNAGLPLRGQRTHTNAKTCRKLR 114 >UniRef50_P42732 30S ribosomal protein S13, chloroplastic n=11 Tax=Spermatophyta RepID=RR13_ARATH Length = 169 Score = 132 bits (333), Expect = 3e-30, Method: Composition-based stats. Identities = 50/107 (46%), Positives = 77/107 (71%), Gaps = 1/107 (0%) Query: 2 ARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVA 61 AR+ G+ IP +K +L I+G+G+TR++ IL + E+ +++E ++ LRDEV+ Sbjct: 48 ARVGGVEIPANKRIEYSLQYIHGIGRTRARQILVDLQM-ENKITKDMAEEELIILRDEVS 106 Query: 62 KFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNART 108 K+++EGDLRR +++IKRL ++ CYRG+RH +GLP RGQRTK N RT Sbjct: 107 KYMIEGDLRRFNALAIKRLKEIQCYRGVRHIQGLPCRGQRTKNNCRT 153 >UniRef50_Q2GEB8 30S ribosomal protein S13 n=3 Tax=Proteobacteria RepID=RS13_NEOSM Length = 123 Score = 131 bits (331), Expect = 5e-30, Method: Composition-based stats. Identities = 50/114 (43%), Positives = 79/114 (69%), Gaps = 1/114 (0%) Query: 3 RIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAK 62 R G+N+PD+K V+ALT +YG+G ++ I ++ I K+ +L + Q++++ + Sbjct: 2 RFLGVNLPDNKAVVVALTYLYGIGLPTARKICSSLAIDGSAKLPDLEQEQLNSIMAYIKN 61 Query: 63 FV-VEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKP 115 + EG+LR+ ++ SIK L+D+ CYRG+RHR+ LPVRGQRT+TNARTRKG + Sbjct: 62 DIPFEGELRKSVAFSIKHLVDIKCYRGVRHRKNLPVRGQRTRTNARTRKGKVRV 115 >UniRef50_A8GVD5 30S ribosomal protein S13 n=54 Tax=Bacteria RepID=RS13_RICB8 Length = 125 Score = 130 bits (327), Expect = 2e-29, Method: Composition-based stats. Identities = 60/117 (51%), Positives = 84/117 (71%), Gaps = 1/117 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 MARIA +NIPD+K V++LT IYG+G T +K I A I ED K+ +L++ ++ +LR+ + Sbjct: 1 MARIASVNIPDNKRLVVSLTYIYGLGTTMAKTICKKAKILEDKKVKDLTDQELISLRNII 60 Query: 61 AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 + VEGDLRRE++++IK+ D+ Y+GLRH R LPVRGQ T +NARTRKG I Sbjct: 61 ENEYKVEGDLRREVTLNIKKKKDIRSYQGLRHIRKLPVRGQNTHSNARTRKGKAVAI 117 >UniRef50_O21258 Ribosomal protein S13 n=1 Tax=Reclinomonas americana RepID=O21258_RECAM Length = 122 Score = 128 bits (322), Expect = 6e-29, Method: Composition-based stats. Identities = 49/115 (42%), Positives = 72/115 (62%), Gaps = 1/115 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M + GINI +K AL +IYG+G + + + G+ +K+S+L+E QI L + Sbjct: 1 MIHLFGININSNKKIPFALKAIYGLGNKKVDELCSYMGLNPKLKMSDLNESQISKLCHYI 60 Query: 61 A-KFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRK 114 F++E +LR+ + +IKRL+D+ YRGLRH GLPV GQRT TNA+T+K K Sbjct: 61 EENFLIESELRKNQTYNIKRLLDIKSYRGLRHAYGLPVHGQRTHTNAKTQKSLSK 115 >UniRef50_P46747 Ribosomal protein S13, mitochondrial n=1 Tax=Prototheca wickerhamii RepID=RT13_PROWI Length = 119 Score = 126 bits (318), Expect = 2e-28, Method: Composition-based stats. Identities = 41/118 (34%), Positives = 61/118 (51%), Gaps = 1/118 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M I ++ D K A IYG+G I G++ + ++ LS GQ L + Sbjct: 1 MVYIQNTHLNDKKQIYQACAQIYGLGHHHCLQICDVLGVSPETRLGMLSTGQHTLLAQII 60 Query: 61 A-KFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIK 117 + D+RR +I+RL+++ YRG RH +GLPVRGQR+ NART + + IK Sbjct: 61 TQNYDTGSDVRRFTRQNIQRLVNIHSYRGYRHIQGLPVRGQRSHGNARTVRKLKNVIK 118 >UniRef50_Q601J1 30S ribosomal protein S13 n=8 Tax=Bacteria RepID=RS13_MYCH2 Length = 137 Score = 126 bits (316), Expect = 3e-28, Method: Composition-based stats. Identities = 59/129 (45%), Positives = 83/129 (64%), Gaps = 13/129 (10%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAG-------------IAEDVKISE 47 MAR+ + IP+HK VIAL SI+G+GK+ + I+ + E+ K+ E Sbjct: 1 MARVLNVEIPNHKRIVIALCSIFGIGKSLATEIVEKTAKLQEEKFGKKFPILTENTKVKE 60 Query: 48 LSEGQIDTLRDEVAKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNAR 107 ++E + +RD + EGDL RE+ +IKRL+++ CYRG+RHR+GLPVRGQ T+ NAR Sbjct: 61 INEEVLQVIRDVAKTYKTEGDLHREVQSNIKRLIEIKCYRGIRHRKGLPVRGQVTQKNAR 120 Query: 108 TRKGPRKPI 116 TRKGPRK I Sbjct: 121 TRKGPRKTI 129 >UniRef50_B0CSU7 Predicted protein n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0CSU7_LACBS Length = 112 Score = 124 bits (313), Expect = 6e-28, Method: Composition-based stats. Identities = 39/114 (34%), Positives = 59/114 (51%), Gaps = 6/114 (5%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M I G+N+PD+ A ALT YG+G + + A + + K+ +LS Q+ +L + Sbjct: 1 MVHILGVNLPDNHLARFALTKFYGIGHKTAHRLCARLQVHDKCKVKDLSPFQVTSLASFL 60 Query: 61 AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRK 114 + REI +I +G Y G RH LPVRGQ T++NA+T K + Sbjct: 61 S------APAREIRENIAHQRMIGSYVGKRHAMHLPVRGQNTQSNAKTAKKLNQ 108 >UniRef50_P53937 37S ribosomal protein SWS2, mitochondrial n=13 Tax=Saccharomycetales RepID=SWS2_YEAST Length = 143 Score = 124 bits (313), Expect = 6e-28, Method: Composition-based stats. Identities = 39/118 (33%), Positives = 62/118 (52%), Gaps = 1/118 (0%) Query: 2 ARIAGINIPDHKHAVIALT-SIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 I G + IAL YG+GKT ++ I + G +++ +LSE QI ++ E+ Sbjct: 3 VHILGKGFKGKEVIKIALASKFYGIGKTTAEKICSKLGFYPWMRMHQLSEPQIMSIASEL 62 Query: 61 AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIKK 118 + +EGD R + +I +G Y G+RH LPVRGQ T+ NA+T + K ++ Sbjct: 63 STMTIEGDARAIVKDNIALKRKIGSYSGMRHTLHLPVRGQHTRNNAKTARKLNKIDRR 120 >UniRef50_B0JY40 30S ribosomal protein S13 n=138 Tax=cellular organisms RepID=RS13_MICAN Length = 127 Score = 124 bits (312), Expect = 9e-28, Method: Composition-based stats. Identities = 52/101 (51%), Positives = 72/101 (71%), Gaps = 1/101 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 MARIAG+++P K IALT +YGVG +RS+ +L+A G+ D ++ +LS+ + LR + Sbjct: 1 MARIAGVDLPRDKRVEIALTYLYGVGLSRSQEVLSATGVNPDTRVKDLSDEDVAALRTYI 60 Query: 61 A-KFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQ 100 + +EGDLRR +M+IKRL D+G YRG RHR GLPVRGQ Sbjct: 61 ETNYQIEGDLRRWEAMNIKRLADIGTYRGRRHRLGLPVRGQ 101 >UniRef50_A0T0J8 30S ribosomal protein S13, chloroplastic n=2 Tax=Eukaryota RepID=RR13_PHATR Length = 123 Score = 123 bits (310), Expect = 1e-27, Method: Composition-based stats. Identities = 49/118 (41%), Positives = 77/118 (65%), Gaps = 2/118 (1%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M R+ G+++P +K ALT I+G+G T ++ I+ A I + + +L+ + LR + Sbjct: 1 MVRLVGVDLPRNKRIAYALTYIHGIGLTSARKIIEIANINPETRTVDLTTEETVALRQTL 60 Query: 61 AK--FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 + +EGDLRR ++IKRL ++ C+RG RHR LPVRGQRT+TNAR+R+G +K + Sbjct: 61 EESDLKLEGDLRRFNGLNIKRLNEINCHRGKRHRNNLPVRGQRTRTNARSRRGSKKTV 118 >UniRef50_Q0UWA4 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum RepID=Q0UWA4_PHANO Length = 163 Score = 123 bits (310), Expect = 2e-27, Method: Composition-based stats. Identities = 42/114 (36%), Positives = 61/114 (53%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M + G N + +L S +G+G S+ ++A I K+ L + L E+ Sbjct: 1 MVFLNGFNFTEATLVKRSLESFFGIGPKVSQGLMAKFHIHPWAKVGSLKNTTVLELTAEL 60 Query: 61 AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRK 114 + +E DLRRE+ +I+RL D+G YRG RH GLPVRGQRT+T T + K Sbjct: 61 SNMKIENDLRREVQENIRRLKDMGTYRGRRHAMGLPVRGQRTRTQITTARKLNK 114 >UniRef50_Q0QIP8 Ribosomal protein S13 n=1 Tax=Oltmannsiellopsis viridis RepID=Q0QIP8_OLTVI Length = 117 Score = 121 bits (305), Expect = 6e-27, Method: Composition-based stats. Identities = 40/117 (34%), Positives = 59/117 (50%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M I D K +L G+G ++ I G+A + +S L+ QI L + Sbjct: 1 MKYILQTPCDDKKPLKASLQKFLGIGPKKAIEICDKLGVASSMNLSSLNAYQIHVLTGIL 60 Query: 61 AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIK 117 + + +RR+ +I+RL+ + YRG RH GLP RGQRTKTNA T + + IK Sbjct: 61 NSYDIRHSVRRKKRENIQRLVRISSYRGFRHTAGLPCRGQRTKTNANTARKFKFKIK 117 >UniRef50_A6YEC0 Ribosomal protein S13 n=1 Tax=Chlorokybus atmophyticus RepID=A6YEC0_CHLAT Length = 121 Score = 121 bits (304), Expect = 8e-27, Method: Composition-based stats. Identities = 45/112 (40%), Positives = 64/112 (57%), Gaps = 1/112 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M+ I+ K IAL ++G+G + S I G +E+ + +LS+ QID L V Sbjct: 1 MSYNLQIDFYSKKKIRIALRQLFGIGPSLSNQICDQLGFSENTTVDQLSKSQIDRLTRLV 60 Query: 61 AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKG 111 + + +LRR IS IKR + +GCYRG RH LP+RGQRT +NART + Sbjct: 61 NQQYFTGPELRRLISQDIKRFIRIGCYRGFRHNDALPLRGQRTHSNARTCRK 112 >UniRef50_C8V8H2 40S ribosomal protein S13 (AFU_orthologue; AFUA_4G07640) n=6 Tax=Leotiomyceta RepID=C8V8H2_EMENI Length = 119 Score = 121 bits (303), Expect = 9e-27, Method: Composition-based stats. Identities = 42/118 (35%), Positives = 65/118 (55%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M I G+N P+ + +L +GVG S I++ I + K+ EL+ Q+ L + Sbjct: 1 MVFILGVNFPEGQLVQKSLQKFFGVGPQVSSRIMSRFHIHQTCKVGELANKQVLDLTAVL 60 Query: 61 AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIKK 118 ++ +E DLRR++ IKRL + G YRG RH GLPVRGQRT+ N + + ++ Sbjct: 61 SEMKIENDLRRQVLDDIKRLKETGTYRGRRHALGLPVRGQRTRNNNKIAIRLNRIDRR 118 >UniRef50_D1I5P5 Whole genome shotgun sequence of line PN40024, scaffold_151.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D1I5P5_VITVI Length = 912 Score = 120 bits (302), Expect = 1e-26, Method: Composition-based stats. Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 23/133 (17%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + R+ N+ + + ALTSI G+G+ + + A + + + ELS +++ L V Sbjct: 772 ILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAAELENLMVIV 831 Query: 61 AK-----------------------FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPV 97 A VV L ++ ++RL + +RGLRH GL V Sbjct: 832 ANPRQFKIPDWFLNRKKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 891 Query: 98 RGQRTKTNARTRK 110 RGQ TKT R K Sbjct: 892 RGQHTKTTGRRGK 904 >UniRef50_C0QW17 30S ribosomal protein S13 n=2 Tax=Brachyspira RepID=C0QW17_BRAHW Length = 125 Score = 119 bits (300), Expect = 2e-26, Method: Composition-based stats. Identities = 50/108 (46%), Positives = 69/108 (63%), Gaps = 1/108 (0%) Query: 5 AGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVA-KF 63 G+ I ++K IALT IYG+G+T + I A I +K +L++ QI LRD + Sbjct: 1 MGVEIRNNKRIEIALTDIYGIGRTLAHVICDKANIDYSIKAKDLTDAQITALRDAIEATT 60 Query: 64 VVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKG 111 VEGDLR E+ +IKRL D+ YRG+RH + LPV GQRT+TN+R +G Sbjct: 61 KVEGDLRTELYNNIKRLKDIHSYRGMRHIKRLPVHGQRTRTNSRNARG 108 >UniRef50_A3LSH2 Predicted protein n=4 Tax=Saccharomycetaceae RepID=A3LSH2_PICST Length = 122 Score = 118 bits (297), Expect = 4e-26, Method: Composition-based stats. Identities = 42/114 (36%), Positives = 65/114 (57%), Gaps = 1/114 (0%) Query: 2 ARIAGINIPDHKHAVIALTS-IYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + G +I + I L I+G+G ++ I A GI +++++LSE QI L E+ Sbjct: 3 VHVFGKSIKHNSLVRIGLAKAIFGIGYQTAERICAKVGIYPQMRMNQLSEPQIMDLNKEI 62 Query: 61 AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRK 114 + +VEG L+++I+ I+ D+G Y G RH +GLPVRGQ T+ NA T K Sbjct: 63 SDLLVEGHLKQKINNDIRMKRDIGSYSGFRHAQGLPVRGQGTRNNAATAGKLNK 116 >UniRef50_C5DMG2 KLTH0G08646p n=2 Tax=Saccharomycetaceae RepID=C5DMG2_LACTC Length = 149 Score = 118 bits (297), Expect = 5e-26, Method: Composition-based stats. Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 1/118 (0%) Query: 2 ARIAGINIPDHKHAVIALT-SIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 I G + IAL YG+G S+ + A G +++ +LSE QI ++ E+ Sbjct: 3 VHILGKGFKGKEVIKIALASKFYGIGLKTSETLCAKLGFYPWMRMHQLSEPQIMSITSEL 62 Query: 61 AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIKK 118 + +EG+ R + +I +G Y+G+RH LPVRGQ T+ NA+T + + ++ Sbjct: 63 STMTIEGNARAVVKENIALKRRIGSYQGMRHALNLPVRGQHTRNNAKTARRLNRVDRR 120 >UniRef50_Q8LPW2 Small ribosomal subunit protein S13, mitochondrial n=2 Tax=Glycine max RepID=RT13_SOYBN Length = 148 Score = 118 bits (296), Expect = 6e-26, Method: Composition-based stats. Identities = 40/106 (37%), Positives = 75/106 (70%), Gaps = 1/106 (0%) Query: 8 NIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKFVVEG 67 IPD+K V AL +++G+G+++++ I+A G+ E+ + +LS+ ++ ++R+ ++K+++ Sbjct: 38 EIPDNKRLVYALQNLHGIGRSKAQHIVAELGV-ENKFVKDLSKRELYSIRELLSKYLIGN 96 Query: 68 DLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPR 113 DL++ + + RL+ + CYRG+RH LP RGQRT TNARTR+ + Sbjct: 97 DLKKCVERDVGRLVGIQCYRGIRHVDSLPCRGQRTHTNARTRRSRK 142 >UniRef50_Q8M1G5 Ribosomal protein S13 n=1 Tax=Chaetosphaeridium globosum RepID=Q8M1G5_CHAGL Length = 122 Score = 117 bits (294), Expect = 9e-26, Method: Composition-based stats. Identities = 40/109 (36%), Positives = 70/109 (64%), Gaps = 1/109 (0%) Query: 10 PDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVA-KFVVEGD 68 + K AL +YG+G+ ++ I + G++ +K+++L+ Q D L ++ F++E + Sbjct: 14 NNKKQLRFALIQLYGIGRAKASFICSLLGVSPFIKVNQLTRFQTDELNKIISSNFLIELE 73 Query: 69 LRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIK 117 L+R + I+RL+ +GCYRGLRH GLP+RGQRT TNA+T + + ++ Sbjct: 74 LKRIVQTDIRRLVTIGCYRGLRHIAGLPLRGQRTHTNAKTARRLQLKLR 122 >UniRef50_Q2TUB5 Ribosomal protein S13 n=1 Tax=Dictyota dichotoma RepID=Q2TUB5_DICDH Length = 115 Score = 117 bits (294), Expect = 1e-25, Method: Composition-based stats. Identities = 41/115 (35%), Positives = 64/115 (55%), Gaps = 2/115 (1%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M+ I G + K + +L+ I+G+G RS+ + +GI D + ++ QI L + + Sbjct: 1 MSYIVGTSFSAEKSVLFSLSYIFGIGSYRSRILCNKSGIGLDCRFCDIDYDQIRILENLI 60 Query: 61 --AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPR 113 + F + L + I+R + CYRGLRH+RGLPVRGQRT TNA+ R + Sbjct: 61 EASSFRLGQSLEKYQIERIRRFYGIMCYRGLRHKRGLPVRGQRTHTNAKRRSTVK 115 >UniRef50_Q3S2A2 Ribosomal protein S13 n=1 Tax=Thalassiosira pseudonana RepID=Q3S2A2_THAPS Length = 115 Score = 116 bits (292), Expect = 2e-25, Method: Composition-based stats. Identities = 40/115 (34%), Positives = 66/115 (57%), Gaps = 2/115 (1%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M I +P+ K +LT ++G+GK +S I G++ + K+S+L+ Q L + Sbjct: 1 MVYILETELPEDKSIYFSLTKVFGIGKFQSLLICKRLGLSSNCKLSKLTSDQTIKLVKSI 60 Query: 61 A--KFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPR 113 V+ +LR+ ++ +K+L+ + Y+G+R RGLPVRGQRT TNA+T R Sbjct: 61 ENANLVINSNLRKSKTILLKKLIQIKTYKGIRRLRGLPVRGQRTHTNAKTASRTR 115 >UniRef50_B2MWT5 Ribosomal protein S13 n=1 Tax=Hemiselmis andersenii RepID=B2MWT5_9CRYP Length = 113 Score = 116 bits (291), Expect = 2e-25, Method: Composition-based stats. Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 2/112 (1%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M I +N+ +K + +YG+G+ ++ I D + +L++ + L ++ Sbjct: 1 MVYILSVNLKSNKRVYFEVAKLYGIGRYQAIQFCNQLNIGFDCYVKDLNQAYLYALLKQI 60 Query: 61 A--KFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 +V+ L+ + I L+D+ YRG+RH LPVRGQRT+TNAR+RK Sbjct: 61 EHQNLIVDTMLQDQQKKIISELIDIKAYRGVRHIFRLPVRGQRTRTNARSRK 112 >UniRef50_C1KRH7 Ribosomal protein S13 n=2 Tax=Micromonas RepID=C1KRH7_9CHLO Length = 120 Score = 115 bits (289), Expect = 4e-25, Method: Composition-based stats. Identities = 41/119 (34%), Positives = 61/119 (51%), Gaps = 1/119 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M N+ + ALT IYG+G + + G+ + + L+ Q+D L + Sbjct: 1 MVFFMQQNLRPNIKVRNALTQIYGIGSFTANQVCDQLGLRSSLLVKHLNGAQLDQLARVI 60 Query: 61 AKFVVEG-DLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIKK 118 +F V G +L R I I R + + Y+G R +GLPVRGQRT TNAR + +KPI + Sbjct: 61 NRFHVTGQELERVIQQDISRFVRISIYKGFRFTQGLPVRGQRTHTNARNTRKKKKPILR 119 >UniRef50_Q9CA19 Small ribosomal subunit protein S13, mitochondrial n=4 Tax=rosids RepID=RT13_ARATH Length = 154 Score = 115 bits (289), Expect = 4e-25, Method: Composition-based stats. Identities = 45/115 (39%), Positives = 68/115 (59%), Gaps = 1/115 (0%) Query: 2 ARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVA 61 R+ +P++K L +YG+G+ +S +L GI + +L+ ++ LR+EV Sbjct: 32 IRVGNAEVPNNKPLKTGLQEVYGIGRRKSHQVLCHLGIT-NKLARDLTGKELIDLREEVG 90 Query: 62 KFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 + +LRR + I+RL+++ CYRG RHR GLP RGQRT TNART+KG I Sbjct: 91 QHQHGDELRRRVGSEIQRLVEVDCYRGSRHRHGLPCRGQRTSTNARTKKGKAVAI 145 >UniRef50_B2B6R1 Predicted CDS Pa_2_8560 n=1 Tax=Podospora anserina RepID=B2B6R1_PODAN Length = 119 Score = 114 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 43/118 (36%), Positives = 60/118 (50%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M + G+N + K AL Y +G + I+A I KI LS + L E+ Sbjct: 1 MVSLFGVNFHEAKLVQKALQHFYALGSQTATRIMAKHSIHPRAKIGTLSPKTVTALTAEL 60 Query: 61 AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIKK 118 + V+E D R+ I +IKRL D+G YRG RH LPVRGQRT+ +T + +K Sbjct: 61 STMVIESDARKIIQDNIKRLRDMGTYRGRRHAMNLPVRGQRTRNQNKTAIKLNRVERK 118 >UniRef50_Q74M95 30S ribosomal protein S13P n=1 Tax=Nanoarchaeum equitans RepID=RS13_NANEQ Length = 153 Score = 113 bits (284), Expect = 1e-24, Method: Composition-based stats. Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 23/133 (17%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + IA +++ HK + L + GV + A+ AA GI + KI LS+ +++ L D + Sbjct: 13 IVHIADVDLDGHKPIYVELRKVVGVNWMFAHAVCAALGIDKWRKIGSLSDEELEKLEDAL 72 Query: 61 AK-----------------------FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPV 97 +V D + + IKR M + +RG RHR GLPV Sbjct: 73 RNPWKYGIPSWLYNRRRDPETGKDLHLVGNDYKITMEFDIKREMQINSWRGYRHREGLPV 132 Query: 98 RGQRTKTNARTRK 110 RGQRT+++ R + Sbjct: 133 RGQRTRSHHRKGR 145 >UniRef50_B0BLG5 Ribosomal protein S13 n=3 Tax=Embryophyta RepID=B0BLG5_CYCTA Length = 150 Score = 113 bits (283), Expect = 2e-24, Method: Composition-based stats. Identities = 40/112 (35%), Positives = 67/112 (59%), Gaps = 1/112 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M+ I G ++ IA T I G+G ++ + GI++++K++E ++ QID + + Sbjct: 1 MSYIPGARSVPNEQVRIASTKIDGIGPKKATRVRYRLGISDNIKVNESTKYQIDQIEQII 60 Query: 61 AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKG 111 + VV +L+R I+R + + YRG+RH+ GLP+RGQRT TNART + Sbjct: 61 GQDHVVHWELKRGKRADIERSISISRYRGIRHQDGLPLRGQRTHTNARTCRK 112 >UniRef50_C6UN26 30S ribosomal protein n=1 Tax=Candidatus Hodgkinia cicadicola Dsem RepID=C6UN26_HODCD Length = 118 Score = 112 bits (282), Expect = 2e-24, Method: Composition-based stats. Identities = 45/104 (43%), Positives = 66/104 (63%), Gaps = 1/104 (0%) Query: 8 NIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVA-KFVVE 66 +P+HK +AL ++GVG + +L A + ++ ++L+ Q D + + + VVE Sbjct: 2 ELPEHKQVWVALQRVHGVGPHVATCVLRALAVPLRLRTAQLTRLQRDAITRVLEDELVVE 61 Query: 67 GDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 G LR ++ I +L +GCYRGLRHR GLPVRGQRT+TNA TRK Sbjct: 62 GGLRLKVRADINKLRRMGCYRGLRHRLGLPVRGQRTRTNAHTRK 105 >UniRef50_B6JWK5 Mitochondrial 37S ribosomal protein SWS2 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6JWK5_SCHJY Length = 142 Score = 112 bits (282), Expect = 2e-24, Method: Composition-based stats. Identities = 34/94 (36%), Positives = 56/94 (59%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M + G+++PDHK ALTS YG+G+ ++AI A + +KI +L+E Q+ L + Sbjct: 1 MVFLLGVSLPDHKPVKYALTSFYGIGRITAEAICARLSFHDTLKIQDLTETQLTRLSQIL 60 Query: 61 AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRG 94 +E DL+R++ +I R + + Y+GLRH G Sbjct: 61 NGMTLESDLKRDVQKNIARYVQIRSYKGLRHSAG 94 >UniRef50_P08977 Ribosomal protein S13, mitochondrial n=165 Tax=Embryophyta RepID=RT13_MAIZE Length = 129 Score = 112 bits (280), Expect = 5e-24, Method: Composition-based stats. Identities = 46/119 (38%), Positives = 71/119 (59%), Gaps = 4/119 (3%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M+ I+G + IA T + G+G ++ + GI+ ++KI EL++ QID + + Sbjct: 1 MSYISGARSLPDEQVRIASTKMDGIGPKKAIQLRYRLGISGNIKIHELTKYQIDQIEQMI 60 Query: 61 AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIKK 118 A+ VV +L+R I+RL+ + YRG+RH+ G P+RGQRT TNART RK I+K Sbjct: 61 AQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTA---RKQIRK 116 >UniRef50_Q6UVP6 Ribosomal protein S13 n=1 Tax=Pseudendoclonium akinetum RepID=Q6UVP6_PSEAK Length = 119 Score = 111 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 1/114 (0%) Query: 4 IAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKF 63 + G N+ ++K A AL +IYGVG+ + A+ GI ++ EL+ Q++ L + Sbjct: 3 LLGSNVSENKAAFFALQAIYGVGQKSAAAVCNLVGINPQTRLRELNSTQLELLTKSCRRL 62 Query: 64 VVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIK 117 + +RE +IK L+ + CYRG RH LP RGQRT+TNA T K ++ Sbjct: 63 IASNK-KREKVEAIKSLIKISCYRGTRHMNALPCRGQRTRTNAYTSKNLLSKLR 115 >UniRef50_Q0W1V6 30S ribosomal protein S13P n=4 Tax=Euryarchaeota RepID=RS13_UNCMA Length = 224 Score = 110 bits (275), Expect = 2e-23, Method: Composition-based stats. Identities = 37/131 (28%), Positives = 53/131 (40%), Gaps = 22/131 (16%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + RIA ++ + ALT I G+G SK I A + + L Q+D LR + Sbjct: 72 IVRIANTDLDGTQTVEFALTGIKGIGNRISKIIARQAQVDPHATMGYLPPEQVDKLRAVI 131 Query: 61 ----------------------AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVR 98 K + DL + I + + Y+G+RH RG VR Sbjct: 132 DNLEANVPVWMLNRRRDIYTGEDKHLYGVDLTMAVKEDINIMKKIRSYKGIRHERGQKVR 191 Query: 99 GQRTKTNARTR 109 GQRTK+ RT Sbjct: 192 GQRTKSTGRTG 202 >UniRef50_Q0P3I6 Rps13 n=1 Tax=Ostreococcus tauri RepID=Q0P3I6_OSTTA Length = 116 Score = 109 bits (274), Expect = 2e-23, Method: Composition-based stats. Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 1/111 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M + + L IYG+ + I G+ V + LS Q + L + Sbjct: 1 MVFLFQKKLTPTNTIRKELKKIYGINSFLANQICDQLGLHTTVTVGALSLDQTEKLGRIL 60 Query: 61 -AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 ++ E DL++++ + +R + +GCYRG R + LP+RGQRT TNA+T K Sbjct: 61 QYYYLTEHDLKKQVQGNFQRFIQIGCYRGFRVTQRLPLRGQRTHTNAKTAK 111 >UniRef50_Q9G886 Ribosomal protein S13 n=1 Tax=Malawimonas jakobiformis RepID=Q9G886_9EUKA Length = 126 Score = 109 bits (273), Expect = 3e-23, Method: Composition-based stats. Identities = 53/111 (47%), Positives = 72/111 (64%), Gaps = 1/111 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M + G I +K+ IALTSIYG+G + I + GI KI +++ Q+ T+R V Sbjct: 1 MLYLFGTYIKKNKNLRIALTSIYGLGYKNTCKICNSIGIGNKKKIDKITNTQLYTIRKIV 60 Query: 61 A-KFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 K+ + GDLRR IS++IKR +D+ YRGLRH+ PVRGQRT TNART+K Sbjct: 61 NNKYKISGDLRRIISINIKRYIDIKSYRGLRHKLSYPVRGQRTHTNARTQK 111 >UniRef50_Q0DPA4 Os03g0704000 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q0DPA4_ORYSJ Length = 203 Score = 108 bits (271), Expect = 5e-23, Method: Composition-based stats. Identities = 36/87 (41%), Positives = 56/87 (64%), Gaps = 1/87 (1%) Query: 2 ARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVA 61 RI G+ IP+HK +L I+G+G++RS+ IL V +LSE ++ TLR EV Sbjct: 47 IRIGGVEIPNHKRVEYSLQYIHGIGRSRSRQILLDLNFDNKVT-KDLSEEEVITLRKEVT 105 Query: 62 KFVVEGDLRREISMSIKRLMDLGCYRG 88 K+++EGDL+R ++I+RL ++ CYR Sbjct: 106 KYMIEGDLKRFNRVAIERLKEIRCYRA 132 >UniRef50_Q46GC7 30S ribosomal protein S13P n=9 Tax=Methanomicrobia RepID=RS13_METBF Length = 162 Score = 108 bits (271), Expect = 6e-23, Method: Composition-based stats. Identities = 36/131 (27%), Positives = 52/131 (39%), Gaps = 22/131 (16%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + RI ++ K ALT + G+G+ + I AG+ + L + ++ L + Sbjct: 23 LVRIMNTDLKGAKPVEYALTGLPGIGRRTAILIAKGAGVDPTATLGYLPDEEVAKLDRAI 82 Query: 61 AKF---VVEGDLRRE-------------------ISMSIKRLMDLGCYRGLRHRRGLPVR 98 F V L R+ I L + YRGLRH RGL VR Sbjct: 83 GNFEGIVPSWMLNRQKDLATGQDKHLLGTDILLTFREDINNLKKVRAYRGLRHERGLKVR 142 Query: 99 GQRTKTNARTR 109 GQRTK+ R Sbjct: 143 GQRTKSTGRRG 153 >UniRef50_Q2TUF4 Ribosomal protein S13 n=11 Tax=Phaeophyceae RepID=Q2TUF4_9PHAE Length = 119 Score = 108 bits (270), Expect = 6e-23, Method: Composition-based stats. Identities = 44/118 (37%), Positives = 65/118 (55%), Gaps = 2/118 (1%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRD-- 58 M I G +IP+ K V ++ IYG+G ++SK + AG D + ++ + L + Sbjct: 1 MPFIIGTSIPEDKVLVQSVAHIYGIGLSQSKILCKKAGFGSDSRGRNVTFSKGKNLENLA 60 Query: 59 EVAKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 E + DLRR + I+RL + YRG RHR+GLPVRGQRT TNA+ R + + Sbjct: 61 EAIPLPLGPDLRRFQNDKIRRLCLISTYRGSRHRKGLPVRGQRTHTNAKKRPLLKSNV 118 >UniRef50_Q5MF08 Ribosomal protein S13 (Fragment) n=2 Tax=Magnoliophyta RepID=Q5MF08_9MAGN Length = 109 Score = 107 bits (268), Expect = 1e-22, Method: Composition-based stats. Identities = 37/107 (34%), Positives = 64/107 (59%), Gaps = 1/107 (0%) Query: 6 GINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAK-FV 64 G + + IA T + G+G ++ + GI+ ++K++EL++ QI+ + + + V Sbjct: 2 GARLVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIEKMEQMIGQDHV 61 Query: 65 VEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKG 111 V +L++ I+RL+ + YRG+RH+ G PVRGQRT TNART + Sbjct: 62 VHWELKKGERADIERLISISRYRGIRHKDGSPVRGQRTHTNARTFRK 108 >UniRef50_A5E736 Putative uncharacterized protein n=1 Tax=Lodderomyces elongisporus RepID=A5E736_LODEL Length = 122 Score = 107 bits (267), Expect = 1e-22, Method: Composition-based stats. Identities = 39/112 (34%), Positives = 60/112 (53%), Gaps = 1/112 (0%) Query: 4 IAGINIPDHKHAVIALTS-IYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAK 62 I G I I L I+G+G + + A GI K+++L+E QI L E+++ Sbjct: 5 IFGKFIKGDFTVQIGLAKTIFGIGPKVASQLTARVGIYPRCKVNQLTEQQILELNKEISQ 64 Query: 63 FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRK 114 VEG L+++I+ I+ + G+RH +G PVRGQ+TKTN T + K Sbjct: 65 LTVEGHLKQKINSDIQMKRAINSRAGIRHAQGFPVRGQKTKTNGATARRLNK 116 >UniRef50_Q6CFI9 YALI0B06578p n=3 Tax=Saccharomycetales RepID=Q6CFI9_YARLI Length = 156 Score = 107 bits (267), Expect = 2e-22, Method: Composition-based stats. Identities = 34/119 (28%), Positives = 63/119 (52%), Gaps = 2/119 (1%) Query: 2 ARIAGINIPDHKHAVIAL-TSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 I G + L ++GVG ++K + A G+ +++ EL++G I + E+ Sbjct: 3 VHIMGKRFQNTWKVSYGLSQQVFGVGPFQAKRLCAKIGLYPGMRMGELTQGDIMAIVKEL 62 Query: 61 AKFV-VEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIKK 118 + V +E DL ++I+ I+R G Y G RH G+PV+GQ+T+TN + + + ++ Sbjct: 63 STNVTIESDLAKKINADIERKRKTGSYVGRRHVMGMPVKGQKTRTNGKNARRFNRVPRR 121 >UniRef50_C7NZ06 30S ribosomal protein n=3 Tax=Halobacteriaceae RepID=C7NZ06_HALMD Length = 178 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 22/130 (16%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 RI ++ K +LT + G+GK ++ I AG+ L + I+ + ++V Sbjct: 20 FVRIGQTDLDGTKSVERSLTDMNGIGKRAARIIAEKAGVDRQALFGALDDEDIEAVVEKV 79 Query: 61 AKFV----------------------VEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVR 98 + + DL+ + + R+ + Y+G+RH+RG VR Sbjct: 80 EGYADEVPEWLTNHQNDFYSGETTHEIGNDLQMQRRADVNRMQMIDSYKGVRHKRGQKVR 139 Query: 99 GQRTKTNART 108 GQRTK+ RT Sbjct: 140 GQRTKSTGRT 149 >UniRef50_Q2NFZ3 30S ribosomal protein S13P n=9 Tax=Euryarchaeota RepID=RS13_METST Length = 153 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 23/130 (17%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M RI ++ + ALT I G+GK + AI + +D +I + + + + + Sbjct: 9 MVRITRKDVDGNSTIATALTEIRGIGKAFAIAICKVLDLDQDAQIGYIDDESVKQIEAVL 68 Query: 61 A-----------------------KFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPV 97 K ++E DL + + R+ + Y+G RH GLPV Sbjct: 69 ENPQEFGIPEWFLNRRNDYETGETKHLIESDLNMTLRDDLNRMKMIRSYKGKRHEVGLPV 128 Query: 98 RGQRTKTNAR 107 RGQRTK+ R Sbjct: 129 RGQRTKSTFR 138 >UniRef50_B1L794 30S ribosomal protein n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L794_KORCO Length = 149 Score = 106 bits (264), Expect = 3e-22, Method: Composition-based stats. Identities = 37/141 (26%), Positives = 60/141 (42%), Gaps = 23/141 (16%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + R+ + K ++ALT + G+ T + IL AGI + + ELS+ + + D V Sbjct: 9 IVRLLNTTLDGTKPVIVALTGVRGISHTLALTILRKAGIHPNRLLGELSDEEYAKIEDVV 68 Query: 61 AK-----------------------FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPV 97 ++ D+ ++ I + +G ++G+RH GL V Sbjct: 69 NNPHKYGVPWWLMNRQKDYRNNESRILIGDDVNWYMTQDINLMKKIGSWKGIRHELGLKV 128 Query: 98 RGQRTKTNARTRKGPRKPIKK 118 RGQRTKT R K KK Sbjct: 129 RGQRTKTTGRVGKTVGYQRKK 149 >UniRef50_B6HVE9 Pc22g19050 protein n=20 Tax=Leotiomyceta RepID=B6HVE9_PENCW Length = 114 Score = 105 bits (263), Expect = 4e-22, Method: Composition-based stats. Identities = 33/84 (39%), Positives = 50/84 (59%) Query: 22 IYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKFVVEGDLRREISMSIKRLM 81 +G+G S +++ I ++ EL+ Q+ L +++ +E DLRRE+ IKR+ Sbjct: 12 FFGIGNNSSARLMSRFNIHPTCRVGELANKQVLDLTAVLSEMKIENDLRREVLNDIKRMK 71 Query: 82 DLGCYRGLRHRRGLPVRGQRTKTN 105 + G YRG RH GLPVRGQRT+T Sbjct: 72 ETGTYRGRRHALGLPVRGQRTRTQ 95 >UniRef50_Q6E792 Ribosomal protein S13 n=1 Tax=Saprolegnia ferax RepID=Q6E792_SAPFE Length = 117 Score = 105 bits (263), Expect = 4e-22, Method: Composition-based stats. Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 1/117 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M I I + + +LT +YG+ K +SK I GI I++L + Q++ L + + Sbjct: 1 MLYIFDKAISNSNSILYSLTILYGINKFQSKRICKNIGINPQTTINKLKKNQLNRLINYI 60 Query: 61 AKFV-VEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 K + +E L++ + L+++ RG+RH GLPVRGQRT TNA+T K + I Sbjct: 61 NKNIKIEQLLKKIKKDNFNNLLNIKTNRGIRHNLGLPVRGQRTHTNAKTSKKLKNTI 117 >UniRef50_Q18G53 30S ribosomal protein S13P n=8 Tax=Halobacteriaceae RepID=RS13_HALWD Length = 173 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 34/130 (26%), Positives = 53/130 (40%), Gaps = 22/130 (16%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 RI ++ K +LT + G+GK ++ I A + L E +ID++ D V Sbjct: 21 FVRIGTTDLDGTKAVERSLTDMKGIGKRTARIITDVASVDRHATFGLLEEDEIDSITDAV 80 Query: 61 AK----------------------FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVR 98 DL + + R+ + Y+G+RH+RG VR Sbjct: 81 ENLDDHIPGWMTNRREDFFSGDTDHKTGADLEEKRRHDVNRMKMIDSYKGVRHKRGQKVR 140 Query: 99 GQRTKTNART 108 GQRTK+ RT Sbjct: 141 GQRTKSTGRT 150 >UniRef50_A4ZHE7 Ribosomal protein S13 n=4 Tax=Phytophthora RepID=A4ZHE7_PHYRM Length = 138 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 38/115 (33%), Positives = 63/115 (54%), Gaps = 1/115 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M I I D K + +LT +YG+ + +S I GI + +++L ++ L + + Sbjct: 1 MLYIFNKTISDSKSILYSLTILYGINEYQSNKICKNIGINPQITLNKLKNNHVNRLINYI 60 Query: 61 AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRK 114 K VE L++ + I L+++ RG+R +GLPVRGQRT TNA+T K ++ Sbjct: 61 NKNLKVEQLLKKSKTERITELVEIKSNRGIRQSQGLPVRGQRTHTNAKTSKKLKQ 115 >UniRef50_A3MUT0 30S ribosomal protein S13P n=7 Tax=Thermoprotei RepID=RS13_PYRCJ Length = 153 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 35/140 (25%), Positives = 51/140 (36%), Gaps = 22/140 (15%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + RI ++ +K AL I G+G + AI GI + L E QI+ L V Sbjct: 8 IVRIGDTDLDGNKTVAYALAKIRGIGIATAYAICRKLGIDPHATLGLLPEDQINKLDWAV 67 Query: 61 AK----------------------FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVR 98 ++ +L + + L ++G+RH GL VR Sbjct: 68 RNLHELAPAWFLNRRKDPETGRDLHLIGSELVLAAKRDVDLMKKLKSWKGIRHSLGLKVR 127 Query: 99 GQRTKTNARTRKGPRKPIKK 118 GQRT T R KK Sbjct: 128 GQRTVTTGRFGATAGVTKKK 147 >UniRef50_O27999 30S ribosomal protein S13P n=1 Tax=Archaeoglobus fulgidus RepID=RS13_ARCFU Length = 146 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 22/132 (16%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + RIA ++ +K + ALT I G+G ++ I+ G+ K+ EL + I+ ++ V Sbjct: 6 IVRIADTDLDGNKSLMFALTGIKGIGLRAARCIVNELGVDGRAKLGELDDETIEKVKKFV 65 Query: 61 AK----------------------FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVR 98 + ++ D+ + I+RL+ + YRG+RH RG VR Sbjct: 66 EEEIESLPSWLLNRRKDPYSGQDLHLLSKDVDFARMLDIERLIKMKAYRGVRHARGKKVR 125 Query: 99 GQRTKTNARTRK 110 GQRT++ R + Sbjct: 126 GQRTRSTGRKGR 137 >UniRef50_Q5K8M7 30s ribosomal protein s13, putative n=1 Tax=Filobasidiella neoformans RepID=Q5K8M7_CRYNE Length = 194 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 41/164 (25%), Positives = 64/164 (39%), Gaps = 48/164 (29%) Query: 3 RIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAK 62 + G N+PDHK IAL + YG+ S +L GI + +++L+E Q+ L ++ Sbjct: 2 HLLGHNLPDHKPLKIALLTFYGISHALSARLLPRLGIHSEATVAQLTEPQVTALSAYLSS 61 Query: 63 ------------------------------------------------FVVEGDLRREIS 74 +E + RR + Sbjct: 62 PSTTARPSEQQIELAPPGGKVLKPVGHPAIFGELNKGKGKGQEDPLDDLKIETEKRRAMQ 121 Query: 75 MSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIKK 118 I L +G YRG RH G PV GQRT+TNA++ K + ++ Sbjct: 122 ADIAHLRMVGTYRGRRHAAGYPVHGQRTQTNAKSAKKHNRVERR 165 >UniRef50_Q05FK2 30S ribosomal protein S13 n=1 Tax=Candidatus Carsonella ruddii PV RepID=RS13_CARRP Length = 118 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 41/113 (36%), Positives = 64/113 (56%) Query: 4 IAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKF 63 I G+ I K+ V LT IYG+G + S I + ++ K +L+ + + + + K Sbjct: 5 ICGVLISKKKNIVFGLTKIYGIGYSMSLKICSKIENFKNKKFKDLTNEEKAKIENFINKI 64 Query: 64 VVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 VE +L+ I + K+ ++L Y+ LRH++ LP RGQRTKTNA+TRK I Sbjct: 65 NVENNLKTIIKENFKKKLNLNSYKSLRHKKKLPCRGQRTKTNAKTRKKMNHEI 117 >UniRef50_P54019 30S ribosomal protein S13P n=10 Tax=Euryarchaeota RepID=RS13_METJA Length = 150 Score = 102 bits (255), Expect = 3e-21, Method: Composition-based stats. Identities = 39/132 (29%), Positives = 60/132 (45%), Gaps = 23/132 (17%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELS----------- 49 + R++ ++ +K ++AL IYGVG+ ++AI+ A + + L+ Sbjct: 9 LIRVSRTDLDGNKKLIMALQDIYGVGEAMARAIVRVAKLDPNKLAGYLTEEEVKKIEEVL 68 Query: 50 ---------EGQIDTLRDEVA---KFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPV 97 + +D V K V+E DL I RL + CYRG+RH GLP Sbjct: 69 ADPAKFGIPSWMFNRRKDYVTGEDKHVIESDLMIIKQEDINRLKRIRCYRGIRHELGLPC 128 Query: 98 RGQRTKTNARTR 109 RGQRTK+ R Sbjct: 129 RGQRTKSTFRRG 140 >UniRef50_A0RY01 30S ribosomal protein S13P n=4 Tax=Thaumarchaeota RepID=RS13_CENSY Length = 227 Score = 102 bits (255), Expect = 3e-21, Method: Composition-based stats. Identities = 33/130 (25%), Positives = 55/130 (42%), Gaps = 23/130 (17%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + RI G ++P K AV+ L I G+G + AIL I + I L++ Q+ ++ + Sbjct: 54 IVRILGNDLPGEKKAVVGLRQIRGIGYGFATAILDVLKIDNNSNIGYLTDEQVASIEKLL 113 Query: 61 -----------------------AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPV 97 + + D+ + ++R G ++G RH GL V Sbjct: 114 QDPAGAGFPTWFLNRRKDLETGEDRHIFTSDIEFTVRNDVERERVSGSWKGYRHMFGLKV 173 Query: 98 RGQRTKTNAR 107 RGQRT+ R Sbjct: 174 RGQRTRNTGR 183 >UniRef50_C1GA05 40S ribosomal protein S13 n=4 Tax=Onygenales RepID=C1GA05_PARBD Length = 157 Score = 102 bits (254), Expect = 5e-21, Method: Composition-based stats. Identities = 38/101 (37%), Positives = 58/101 (57%) Query: 18 ALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKFVVEGDLRREISMSI 77 AL S +G+G ++A + E KI +L QI +L +++ +E DLRR+I I Sbjct: 50 ALQSFFGIGPLTCSKVMARFYVHETAKIGDLGNKQILSLTAALSEMKIENDLRRQILDDI 109 Query: 78 KRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIKK 118 +RL D+G RG RH GLPVRGQRT++ +T + ++ Sbjct: 110 QRLKDIGTVRGRRHALGLPVRGQRTRSQNKTAIKLNRLDRR 150 >UniRef50_D2JP71 Ribosomal protein S13 n=1 Tax=Synedra acus RepID=D2JP71_9STRA Length = 117 Score = 102 bits (254), Expect = 5e-21, Method: Composition-based stats. Identities = 38/114 (33%), Positives = 63/114 (55%), Gaps = 3/114 (2%) Query: 3 RIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAK 62 I + D+K I LT IYG+G S I G+++++ ++S+ + +L + K Sbjct: 2 YILDTKLKDNKIMTIGLTEIYGIGSKISFKICKKLGLSKNITADQVSKNHLSSLDYILNK 61 Query: 63 ---FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPR 113 V +L++ S +++L+ + RGLR +GLPVRGQRT TNA+T K + Sbjct: 62 EYKLKVSNELKKIESFRLQKLISIKSSRGLRRVKGLPVRGQRTHTNAKTAKKHK 115 >UniRef50_D1Z0V5 30S ribosomal protein S13P n=1 Tax=Methanocella paludicola SANAE RepID=D1Z0V5_METPS Length = 225 Score = 101 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 22/131 (16%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + RI ++ + ALT I G+G SK + A + + + L Q+D LR+ + Sbjct: 71 LVRIQNTDLDGTSKVLYALTGIKGIGIRVSKMLARKAEVDPNAIMGYLPPEQVDRLRNAL 130 Query: 61 AK----------------------FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVR 98 + DL I + + Y+G+RH RG VR Sbjct: 131 ENIDTNMPVWMLNRRNDTYTGENRHLTGTDLILSNKEDINLMKKIRSYKGIRHERGQKVR 190 Query: 99 GQRTKTNARTR 109 GQRT++ RT Sbjct: 191 GQRTRSTGRTG 201 >UniRef50_D1J904 30S ribosomal protein n=1 Tax=uncultured archaeon RepID=D1J904_9ARCH Length = 167 Score = 99.1 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 33/131 (25%), Positives = 58/131 (44%), Gaps = 22/131 (16%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 RI ++ ++ +L + G+G+ ++ ++ +AGI K+ LS+ +++ L+ + Sbjct: 15 FVRILDTDLDGKRNVADSLCGVNGIGRRIAETLVRSAGIDSKGKMGNLSDDEVERLKTAI 74 Query: 61 A----------------------KFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVR 98 K ++ DL + I L + YRG+RH RGL VR Sbjct: 75 NSAEKRLPQWMFNRRKDINTGVDKHIMGTDLALKFRDDINLLRKIRSYRGIRHERGLKVR 134 Query: 99 GQRTKTNARTR 109 GQRTK R Sbjct: 135 GQRTKATGRRG 145 >UniRef50_A8J3J1 Mitochondrial ribosomal protein S13 n=1 Tax=Chlamydomonas reinhardtii RepID=A8J3J1_CHLRE Length = 124 Score = 97.9 bits (243), Expect = 9e-20, Method: Composition-based stats. Identities = 34/114 (29%), Positives = 63/114 (55%), Gaps = 1/114 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 MA+I + + H IAL ++G+GK+ S A+ A GI++D+K+ ++ + I + + Sbjct: 1 MAQIQRVALFPHATFHIALARVFGLGKSTSLAVSEACGISKDLKVKDVKDSYIQKVTAYI 60 Query: 61 AKFVVEGD-LRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPR 113 V GD L+R++ ++ + + RG+RH GLPV +T++N + R Sbjct: 61 EANFVTGDTLKRQVRENVLEEVAINSRRGVRHTLGLPVSSAQTRSNGVNARKLR 114 >UniRef50_Q8W9S0 Ribosomal protein S13 n=1 Tax=Mesostigma viride RepID=Q8W9S0_MESVI Length = 116 Score = 97.5 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 3/116 (2%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M K I L ++G+GK S I + G+ E + S+ +D+L++ + Sbjct: 1 MTFTLTSYASSSKPIPILLQKVFGLGKKNSIQICRSMGLHERMSPKMSSKFILDSLQERL 60 Query: 61 AKFV---VEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPR 113 + + L I ++ +RL+ + YRG RH RGLP RGQRT+TNART + + Sbjct: 61 ETSLGNSLGAPLINRIHLNKERLIKISSYRGFRHHRGLPARGQRTRTNARTCRKKK 116 >UniRef50_Q4Q1Y3 40S ribosomal protein S18, putative n=2 Tax=Eukaryota RepID=Q4Q1Y3_LEIMA Length = 218 Score = 97.5 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 53/133 (39%), Gaps = 23/133 (17%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + R+ N+ + AL + GVG + + AGI + + L+ +++ + + + Sbjct: 78 IVRLLNTNVEGKRKVPFALRMVKGVGIRFAYLVCKKAGIDVERRAGTLTAEELEKIAEII 137 Query: 61 -----------------------AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPV 97 + + + + ++RL + +RG+RH GL V Sbjct: 138 ADPAKFKIPDWFLNRQRDPKTGKTEHLSSSMVDTRLRDDLERLKKMRAHRGVRHAYGLRV 197 Query: 98 RGQRTKTNARTRK 110 RGQ T T+ R K Sbjct: 198 RGQHTCTSGRHGK 210 >UniRef50_Q9HJD6 30S ribosomal protein S13P n=6 Tax=Euryarchaeota RepID=RS13_THEAC Length = 171 Score = 96.8 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 22/129 (17%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + RIA ++ + +AL+ + G+G+ I + D KI EL E Q++ LR+ V Sbjct: 31 IVRIANKDLNGERLLPLALSDLKGIGERLGYVIAERLDLPIDKKIGELKEEQLEKLREYV 90 Query: 61 AK----------------------FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVR 98 +V DL ++ I + + Y+G+RH +G VR Sbjct: 91 EAKEYDLPEWLLNHRREPVTGKNLNLVSTDLEIQVQEDINLMKKIRSYKGIRHEKGKKVR 150 Query: 99 GQRTKTNAR 107 GQRT++N R Sbjct: 151 GQRTRSNGR 159 >UniRef50_P41094 40S ribosomal protein S18 n=266 Tax=Eukaryota RepID=RS18_DROME Length = 152 Score = 96.4 bits (239), Expect = 2e-19, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 23/133 (17%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + RI NI + IA+T+I GVG+ S +L A + + E +E ++D + + Sbjct: 12 ILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTII 71 Query: 61 AK-----------------------FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPV 97 + + +L ++ ++RL + +RGLRH GL V Sbjct: 72 SNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 131 Query: 98 RGQRTKTNARTRK 110 RGQ TKT R + Sbjct: 132 RGQHTKTTGRRGR 144 >UniRef50_Q6LXN1 30S ribosomal protein S13P n=7 Tax=Methanococcus RepID=RS13_METMP Length = 149 Score = 93.7 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 25/140 (17%) Query: 2 ARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVA 61 RI+ ++ AL + G+G+ ++A++ + + L++ + + + Sbjct: 10 IRISKTDLEGKNPLEYALQDMKGIGRAMARAVIRVTELDPKQQAGYLADEDVLKIESVLE 69 Query: 62 -----------------------KFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVR 98 K ++E DL + I + + CY+G+RH LP R Sbjct: 70 DPATHGIPSWMFNRKKDVYSGLDKHLIETDLVLTVQEDITNMKKIRCYKGIRHELRLPCR 129 Query: 99 GQRTKTNARTRKGPRKPIKK 118 GQRT+ RKG +K+ Sbjct: 130 GQRTR--GSFRKGTSMGVKR 147 >UniRef50_P62269 40S ribosomal protein S18 n=58 Tax=Coelomata RepID=RS18_HUMAN Length = 152 Score = 92.2 bits (228), Expect = 4e-18, Method: Composition-based stats. Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 23/133 (17%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + R+ NI + A+T+I GVG+ + +L A I + EL+E +++ + + Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71 Query: 61 AK-----------------------FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPV 97 V+ L ++ ++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131 Query: 98 RGQRTKTNARTRK 110 RGQ TKT R + Sbjct: 132 RGQHTKTTGRRGR 144 >UniRef50_B5SQ48 Ribosomal protein S13 n=2 Tax=unclassified Blastocystis RepID=B5SQ48_9STRA Length = 116 Score = 90.2 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 1/100 (1%) Query: 14 HAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKF-VVEGDLRRE 72 + L IYG+ ++K IL + G +KI L+ + + + K+ ++ DL + Sbjct: 14 SLLFILNKIYGINTMQAKYILHSLGYNPSMKIKNLTPTNLKSFNMFLTKYYLINNDLHYQ 73 Query: 73 ISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGP 112 + K+ + L Y G+R + LP GQ T +NA T K Sbjct: 74 FENNKKQKILLNTYHGVRLKTKLPSHGQNTHSNAHTAKKL 113 >UniRef50_A1RWT9 30S ribosomal protein S13P n=17 Tax=Archaea RepID=RS13_THEPD Length = 157 Score = 89.5 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 23/122 (18%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDE- 59 + R+AG+++P K V AL I G+G + ++A+ G+ + LSE +++ L Sbjct: 8 IVRVAGVDLPGDKALVYALADIKGIGVSTAQAVAKKLGLDPYRLLGTLSEEEVEKLSAAL 67 Query: 60 ----------------------VAKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPV 97 V + ++ DL + I+ + + Y+G+RH GL V Sbjct: 68 REIEKLGLPPWMLNRRKDPFLGVDRHLITSDLLITVRNDIEFMKKIKSYKGVRHMLGLKV 127 Query: 98 RG 99 RG Sbjct: 128 RG 129 >UniRef50_B3T3X1 Putative ribosomal protein S13/S18 n=1 Tax=uncultured marine microorganism HF4000_ANIW133F6 RepID=B3T3X1_9ZZZZ Length = 155 Score = 88.3 bits (218), Expect = 6e-17, Method: Composition-based stats. Identities = 32/131 (24%), Positives = 58/131 (44%), Gaps = 22/131 (16%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + R+A +I + LTSI GVG+ + + + A I L++ + D +R + Sbjct: 16 ILRLADSDIDGLRPIAQGLTSIGGVGQRTAIQLCSMADIDGTKLGGHLTDEEQDRIRSTI 75 Query: 61 AKF----------------------VVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVR 98 ++ ++ +++ + I RL + YRG+RHR G VR Sbjct: 76 DEYALNVPWWLVNRQRDLQSNEDAHIIGMEVKLTLKDDISRLASIKTYRGIRHRSGHKVR 135 Query: 99 GQRTKTNARTR 109 GQR ++N R+ Sbjct: 136 GQRLRSNGRSG 146 >UniRef50_Q8SRP2 40S ribosomal protein S18 n=1 Tax=Encephalitozoon cuniculi RepID=RS18_ENCCU Length = 153 Score = 86.0 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 37/141 (26%), Positives = 53/141 (37%), Gaps = 23/141 (16%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + RI NI K ALT I G+G + AI GI + E+ E ++ + D + Sbjct: 13 IVRIHNTNIDGTKRIPFALTKIRGIGIRIATAICKRLGIDLRKRAGEMGEDEMKRISDAI 72 Query: 61 -----------------------AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPV 97 ++ L ++ M I+R R R GL V Sbjct: 73 LDPASVGIPESYMNHQRDIIDGTTSHLIGTRLDADLRMMIERGKKNKRIRAYRLDVGLKV 132 Query: 98 RGQRTKTNARTRKGPRKPIKK 118 RGQRTK+N R + KK Sbjct: 133 RGQRTKSNGRRGRSMGVSRKK 153 >UniRef50_Q9G8U6 Ribosomal protein S13 n=1 Tax=Rhodomonas salina RepID=Q9G8U6_RHDSA Length = 102 Score = 85.6 bits (211), Expect = 4e-16, Method: Composition-based stats. Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 2/95 (2%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M RI + K +AL SI+G+G + + + I + K+ LS+GQ+ + ++ Sbjct: 1 MVRIFEKFLNRKKLVFVALRSIFGLGSFQIRLLCNKCDIGSNCKVEHLSQGQVINICKKI 60 Query: 61 --AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRR 93 K VE L+ + IKRL+ + C+RG H++ Sbjct: 61 DQNKLFVESQLKSIVKFDIKRLIMVNCFRGFFHKK 95 >UniRef50_A2E0E1 Ribosomal protein S13p/S18e, putative n=3 Tax=Trichomonas vaginalis RepID=A2E0E1_TRIVA Length = 155 Score = 85.6 bits (211), Expect = 5e-16, Method: Composition-based stats. Identities = 32/132 (24%), Positives = 54/132 (40%), Gaps = 23/132 (17%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M R+ N+ + +ALT+I G+G+ + A++ AG+ + L+ + + + + Sbjct: 14 MVRMLSTNVDGRRPLYLALTNISGIGRRFAYAVVRRAGLDPLRRAGTLTPKEEELIVSII 73 Query: 61 -----------------------AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPV 97 V DL I I+R+ + RG+RH GL V Sbjct: 74 QNPTEHQIPVWMLNRRFDRATGQNTHWVATDLSANIRAEIERMKKMRMKRGIRHGLGLKV 133 Query: 98 RGQRTKTNARTR 109 RGQ TK+ R Sbjct: 134 RGQCTKSTGRRG 145 >UniRef50_A8NES7 Putative uncharacterized protein n=3 Tax=Agaricomycetes RepID=A8NES7_COPC7 Length = 182 Score = 85.2 bits (210), Expect = 5e-16, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 60/178 (33%), Gaps = 64/178 (35%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M I G+++PD+ A ALT YGVG+ + + A I + K+ +LS Q+ +L + Sbjct: 1 MVHILGVHLPDNYLARYALTKFYGVGQKTAHRLCARFQIHDKCKVKDLSPFQVTSLASFL 60 Query: 61 AK----------------------FVVEGDLRREISMS---------------------- 76 + +L+ + + Sbjct: 61 SSPATAPPLPRYPLASPDYVPPPPNTPVSELQAKFKEAQALIEAKKLAKIEQGVKLGPGY 120 Query: 77 ----IKRLMDLGCYRGLR----------------HRRGLPVRGQRTKTNARTRKGPRK 114 K ++ R +R H LPVRGQ T++NA T K + Sbjct: 121 VDPLKKLKIESELRREIRENIQHQRMIGSYVGRRHAMHLPVRGQNTQSNAATAKKLNR 178 >UniRef50_D2EFK4 30S ribosomal protein n=2 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EFK4_9EURY Length = 179 Score = 85.2 bits (210), Expect = 6e-16, Method: Composition-based stats. Identities = 30/134 (22%), Positives = 58/134 (43%), Gaps = 23/134 (17%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + RIA ++ K L SI G+G + S A++ I E K+ +L E Q++ L++ + Sbjct: 26 IVRIADTDLDGSKKVKDLLRSITGIGFSYSNALMKVLKIPEGEKLQDLDEKQLNELKEAL 85 Query: 61 AK-----------------------FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPV 97 + ++ +LR + +M I+++ Y+G RH + Sbjct: 86 SNPFKYKLPHWLFNWRRDETTGLDYHLLSNELRSKTTMQIQKIKTSRSYKGYRHSFSYKL 145 Query: 98 RGQRTKTNARTRKG 111 RGQ+ ++ G Sbjct: 146 RGQKVRSRGANVHG 159 >UniRef50_B3H631 Uncharacterized protein At5g14320.2 n=1 Tax=Arabidopsis thaliana RepID=B3H631_ARATH Length = 128 Score = 81.4 bits (200), Expect = 8e-15, Method: Composition-based stats. Identities = 27/79 (34%), Positives = 49/79 (62%), Gaps = 1/79 (1%) Query: 2 ARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVA 61 AR+ G+ IP +K +L I+G+G+TR++ IL + E+ +++E ++ LRDEV+ Sbjct: 48 ARVGGVEIPANKRIEYSLQYIHGIGRTRARQILVDLQM-ENKITKDMAEEELIILRDEVS 106 Query: 62 KFVVEGDLRREISMSIKRL 80 K+++EGDL + + L Sbjct: 107 KYMIEGDLVIHFPLHLHTL 125 >UniRef50_A0SNY5 30S ribosomal protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=A0SNY5_9EURY Length = 177 Score = 81.0 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 34/136 (25%), Positives = 53/136 (38%), Gaps = 27/136 (19%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSK----AILAAAGIAEDVKISELSEGQIDTL 56 + RIA +I + AL + G+G+T S I I I L+E Q+ + Sbjct: 19 IVRIANKDINGGLNIQRALDQVKGIGQTMSHSLSYVIEHKFNIDPSTPIGSLNESQVTQV 78 Query: 57 RDEVAK-----------------------FVVEGDLRREISMSIKRLMDLGCYRGLRHRR 93 + + ++ DL + SI R + L +RG RH+ Sbjct: 79 EELIKDPHKYGVPKYLLNRRNDMDTGKDMHLIGNDLIFAVRQSINRDVTLRVWRGYRHQY 138 Query: 94 GLPVRGQRTKTNARTR 109 G VRGQ T++ RT Sbjct: 139 GQKVRGQHTRSTGRTG 154 >UniRef50_B7XLD6 SSU ribosomal protein S13P n=2 Tax=Enterocytozoon bieneusi H348 RepID=B7XLD6_ENTBH Length = 161 Score = 79.8 bits (196), Expect = 2e-14, Method: Composition-based stats. Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 23/131 (17%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + R+ NI K V ALT I G+G +KA + AG+ ELS +I ++++ + Sbjct: 21 IIRLYNTNIDGTKKIVFALTRIRGLGMRFAKAAVLRAGVDPSKFAGELSPEEIASIQNVI 80 Query: 61 -----------------------AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPV 97 + +V L ++ M I++ RG R GL Sbjct: 81 DEPLKYSIPEYFLNHQKDSVTGEDEHLVGIKLDGDLRMLIEKAKKFKEIRGCRLAMGLKC 140 Query: 98 RGQRTKTNART 108 GQRT++N R Sbjct: 141 NGQRTRSNGRN 151 >UniRef50_Q9G904 Ribosomal protein S13 n=1 Tax=Ochromonas danica RepID=Q9G904_OCHDN Length = 125 Score = 78.7 bits (193), Expect = 5e-14, Method: Composition-based stats. Identities = 32/100 (32%), Positives = 49/100 (49%) Query: 15 AVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKFVVEGDLRREIS 74 + +IYG+ K ++K + G LS + + L +A F + L+ Sbjct: 1 MKKSTNNIYGIKKIKNKFVERQLGYNIFSHKHALSIYKDELLNTFLAGFKQDRVLKEFDK 60 Query: 75 MSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRK 114 +I L++ YRG RH++ LPVRGQRT TNA+T K Sbjct: 61 KNIDFLINNKSYRGSRHKKHLPVRGQRTHTNAKTIKKKSN 100 >UniRef50_C4V7B3 Putative uncharacterized protein n=1 Tax=Nosema ceranae BRL01 RepID=C4V7B3_NOSCE Length = 161 Score = 78.3 bits (192), Expect = 6e-14, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 54/130 (41%), Gaps = 23/130 (17%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + RI N+ K V AL +I G+GK + AI G+ + +L++ +++ +++ + Sbjct: 21 IIRIFNTNVDGTKRVVHALCAITGIGKRMATAICKRTGVDVLRRAGDLNQDELEKIQNAI 80 Query: 61 -----------------------AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPV 97 +V + E M +++ + R R GL V Sbjct: 81 NDPSSVGIPYSFYNYKKNPVDGTNTHLVSTRMDAEYRMMLEKGKKIRHVRLCRVACGLKV 140 Query: 98 RGQRTKTNAR 107 GQR+K+N R Sbjct: 141 HGQRSKSNGR 150 >UniRef50_Q9G8P6 Ribosomal protein S13 n=1 Tax=Naegleria gruberi RepID=Q9G8P6_NAEGR Length = 163 Score = 77.5 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 12/100 (12%) Query: 23 YGVGKTRSKAILAAAGIAEDVKISELSEGQIDT------LRDEVAKFVVEGD------LR 70 +G+G + +K++ +G+ +++I + ++ + + F + L Sbjct: 37 FGIGVSIAKSLCYFSGLHPNLRIHLFLDNYFNSFYSNFYILKRIKYFFLTNKNNLDHFLH 96 Query: 71 REISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 +E+ I L + C +G RH LPVRGQR +TNARTRK Sbjct: 97 KEMISCINVLKTIRCLKGKRHSTFLPVRGQRNRTNARTRK 136 >UniRef50_B8D6G1 30S ribosomal protein n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D6G1_DESK1 Length = 174 Score = 74.4 bits (182), Expect = 9e-13, Method: Composition-based stats. Identities = 25/122 (20%), Positives = 48/122 (39%), Gaps = 23/122 (18%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + R+ ++ V L+ + G+G T S AI G+ + ++ LS+ + ++ + V Sbjct: 22 IVRMLETDVDGELPLVYGLSEVKGLGYTFSLAICRILGLNPEQRVGFLSDDVVKSIEEVV 81 Query: 61 AK-----------------------FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPV 97 + +L + I+R + +RG+RH GL V Sbjct: 82 RNPGKYGIPSWIYNRQKDYTTGQNLHLTGANLVYYVKEDIEREKRVKSWRGIRHALGLKV 141 Query: 98 RG 99 RG Sbjct: 142 RG 143 >UniRef50_A8BZ58 Ribosomal protein S18 n=2 Tax=Giardia intestinalis RepID=A8BZ58_GIALA Length = 154 Score = 72.9 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 33/132 (25%), Positives = 48/132 (36%), Gaps = 23/132 (17%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTL---- 56 + R+ NI AL I G+G+ + L A I + EL+ + D L Sbjct: 13 LLRMFNTNIQGKVVLECALVGIKGIGRRFANVALKKANIDVHKRAGELTAAEEDALMKVL 72 Query: 57 RDEVAKFVVEGDLRREI-------------------SMSIKRLMDLGCYRGLRHRRGLPV 97 D ++ + L R ++RL C RG+RH L V Sbjct: 73 EDPLSHGIPAWMLNRNNDFESGKDMHILVNTIASTHRADLERLRKTRCERGVRHHHNLKV 132 Query: 98 RGQRTKTNARTR 109 RGQ TK+ R Sbjct: 133 RGQHTKSTGRRG 144 >UniRef50_Q9G4D3 Ribosomal protein S13 n=1 Tax=Thraustochytrium aureum RepID=Q9G4D3_9STRA Length = 120 Score = 72.5 bits (177), Expect = 3e-12, Method: Composition-based stats. Identities = 36/113 (31%), Positives = 52/113 (46%), Gaps = 5/113 (4%) Query: 7 INIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAK-FVV 65 + +K L +G + K I G++ IS SE Q++ L + K F Sbjct: 6 KSFKKNKTLFNVLRDTKSIGPIKIKYIAKITGLSLKTPISLFSESQLEHLSIWIEKNFTG 65 Query: 66 EGDLRREI----SMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRK 114 + E S K+++ R LR ++GLPVRGQRTKTNA+T K K Sbjct: 66 SNCIHTEFLQIKSEEKKKIIASKSLRSLRFKKGLPVRGQRTKTNAKTAKRLNK 118 >UniRef50_Q8M0B4 Ribosomal protein S13 n=1 Tax=Amoebidium parasiticum RepID=Q8M0B4_AMOPA Length = 130 Score = 69.8 bits (170), Expect = 3e-11, Method: Composition-based stats. Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 13/106 (12%) Query: 21 SIYGVGKTRSKAILAAAGIAED--VKISELSEGQIDTLRDEVAKFV-----------VEG 67 +YG+G+ I G++ + ++ QIDT KF +E Sbjct: 25 KVYGIGEKEYATISVQLGLSSNQGRGVTSYERSQIDTYIKRRMKFTMLITPDFHTKPIEQ 84 Query: 68 DLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPR 113 +LR ++ I L ++ Y+G+RH++GLPV GQRTKTNA + + R Sbjct: 85 NLRAAMNAKILTLQNIKTYKGIRHKKGLPVNGQRTKTNAISARRKR 130 >UniRef50_A0EBZ1 Chromosome undetermined scaffold_89, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0EBZ1_PARTE Length = 193 Score = 69.0 bits (168), Expect = 4e-11, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 41/112 (36%), Gaps = 16/112 (14%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + RI N+ + + SI G+G+ + I + + EL++ + + + + Sbjct: 14 IIRILNTNVDGKQQMAYEIRSIKGIGRRFAIQICKVLRLNLTKRAGELTDEEAHKITEVI 73 Query: 61 --------------AKFVVEGDLRREISMSIKRLMDLG--CYRGLRHRRGLP 96 V +L ++ ++R+ + + LRH GL Sbjct: 74 KMVPQYIRDLKNGKNYEVTTNELETKLREDLERIKKIKYSQWLCLRHHWGLR 125 >UniRef50_B7P1K9 40S ribosomal protein S18, putative (Fragment) n=1 Tax=Ixodes scapularis RepID=B7P1K9_IXOSC Length = 150 Score = 66.3 bits (161), Expect = 3e-10, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQ 52 + R+ NI + + ALT+I GVG+ S + A + + + EL+E + Sbjct: 12 ILRVLNTNIDGRRKVMFALTAIKGVGRRFSNMVCKKADVDLNKRAGELTEEE 63 >UniRef50_A6RYD3 Putative uncharacterized protein n=1 Tax=Botryotinia fuckeliana B05.10 RepID=A6RYD3_BOTFB Length = 82 Score = 64.0 bits (155), Expect = 1e-09, Method: Composition-based stats. Identities = 22/52 (42%), Positives = 32/52 (61%) Query: 63 FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRK 114 +E +L+R + +I+R+ +G YRG RH GLPVRGQ TK+ T + K Sbjct: 1 MPLETELKRRLQDNIERMRTMGSYRGRRHAMGLPVRGQNTKSQISTARKLNK 52 >UniRef50_Q3LW54 Ribosomal protein S18 n=1 Tax=Bigelowiella natans RepID=Q3LW54_BIGNA Length = 159 Score = 63.6 bits (154), Expect = 2e-09, Method: Composition-based stats. Identities = 31/133 (23%), Positives = 47/133 (35%), Gaps = 23/133 (17%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 RI NI L +I GVG S + + K+ + + ++ + + Sbjct: 18 FIRIFDCNINGSLSCNFGLRNIKGVGIRMSNVLRKILKKDINYKLYNIEKADLEEVVNIF 77 Query: 61 AK-----------------------FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPV 97 K V+ L + IKRL+ + +GLRH L Sbjct: 78 GKSSRKAFPSWLMNRRADFLTGDNLHVLSTVLDSALQEDIKRLVTIKNNKGLRHLSRLKT 137 Query: 98 RGQRTKTNARTRK 110 RGQ TK+N R K Sbjct: 138 RGQHTKSNGRRGK 150 >UniRef50_C0PQ42 Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=C0PQ42_PICSI Length = 89 Score = 63.3 bits (153), Expect = 2e-09, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 39/110 (35%), Gaps = 40/110 (36%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + R+ N+ + + ALTSI G+G+ + + A + + + Sbjct: 12 ILRVLNTNVDGRQKIMFALTSIKGIGRRLANLVCKKADVDMNKR---------------- 55 Query: 61 AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 +RGLRH GL VRGQ TKT R K Sbjct: 56 ------------------------NHRGLRHYWGLRVRGQHTKTTGRRGK 81 >UniRef50_Q8H583 Ribosomal protein S18-like n=2 Tax=Eukaryota RepID=Q8H583_ORYSJ Length = 145 Score = 61.3 bits (148), Expect = 9e-09, Method: Composition-based stats. Identities = 23/61 (37%), Positives = 31/61 (50%) Query: 50 EGQIDTLRDEVAKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTR 109 + Q +D VV L ++ ++RL + +RGLRH GL VRGQ TKT R Sbjct: 77 QQQKKDYKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRG 136 Query: 110 K 110 K Sbjct: 137 K 137 >UniRef50_P46760 Ribosomal protein S13, mitochondrial n=1 Tax=Acanthamoeba castellanii RepID=RT13_ACACA Length = 119 Score = 59.4 bits (143), Expect = 3e-08, Method: Composition-based stats. Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 5/109 (4%) Query: 10 PDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKFVVEGDL 69 +K+ AL I+GV + + G+ + K+S ++ ++ + F Sbjct: 14 NKNKNIFSALKDIHGVNLKKINKMGLVMGLDKFEKVSSMNFELFSLIKKQAIFFY--NLE 71 Query: 70 RREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIKK 118 +I ++ + + Y G+RH LPVRGQRT TNA+T P K IKK Sbjct: 72 ENKIFNNVNKKKKIKNYTGMRHILKLPVRGQRTHTNAKT---PSKNIKK 117 >UniRef50_Q09F78 Ribosomal protein S13 n=5 Tax=Tetrahymena RepID=Q09F78_TETPR Length = 276 Score = 58.3 bits (140), Expect = 7e-08, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 42/106 (39%), Gaps = 1/106 (0%) Query: 4 IAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKF 63 I G + IYG K + + + + ++ F Sbjct: 7 INGYLFNKDTNLYKTYGKIYGWKYLTYKLMFDRFESFYSSNPISYKDAEWKKFKSILSNF 66 Query: 64 VVEG-DLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNART 108 + + +++I L + YRGLRH +GLPVRGQRT TNA + Sbjct: 67 APKNRTFKDRFNINIFFLDFMNTYRGLRHSKGLPVRGQRTWTNAWS 112 >UniRef50_C0S1M2 40S ribosomal protein S13 n=1 Tax=Paracoccidioides brasiliensis Pb03 RepID=C0S1M2_PARBP Length = 105 Score = 55.6 bits (133), Expect = 5e-07, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 31/55 (56%) Query: 34 LAAAGIAEDVKISELSEGQIDTLRDEVAKFVVEGDLRREISMSIKRLMDLGCYRG 88 +A + E KI +L QI +L +++ +E DLRR+I I+RL D+G R Sbjct: 1 MARFYVHETAKIGDLGNKQILSLTAALSEMKIENDLRRQILDDIQRLKDIGTVRA 55 >UniRef50_Q8HIT6 Ribosomal protein S13 n=1 Tax=Monosiga brevicollis RepID=Q8HIT6_MONBE Length = 166 Score = 52.5 bits (125), Expect = 4e-06, Method: Composition-based stats. Identities = 36/162 (22%), Positives = 54/162 (33%), Gaps = 50/162 (30%) Query: 7 INIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKF--- 63 + L I G+GK + I GI +++ S+LSE ID L +A Sbjct: 4 TRFKKNLSLYRNLLKIKGLGKFKIFNICQILGINPNIEYSKLSEHYIDELNLLLANIKKQ 63 Query: 64 -----------------------------------------------VVEGDLRREISMS 76 ++E +L S Sbjct: 64 DYNSILENVNIDNTNTRINNKNIDKNKLNLYLFNKNSTFNKSTKNIVLIEENLNDYESSQ 123 Query: 77 IKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIKK 118 I L+ + RG R + G P +GQRT++NA T K K + K Sbjct: 124 INTLIQINALRGRRIKMGYPSKGQRTRSNAITAKRINKRLIK 165 >UniRef50_A4BF40 30S ribosomal protein S13 (Fragment) n=4 Tax=cellular organisms RepID=A4BF40_9GAMM Length = 35 Score = 49.8 bits (118), Expect = 3e-05, Method: Composition-based stats. Identities = 28/35 (80%), Positives = 31/35 (88%) Query: 84 GCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIKK 118 G YRG+RHRR LPVRGQ TK NARTRKGP+KPIK+ Sbjct: 1 GLYRGIRHRRNLPVRGQNTKNNARTRKGPKKPIKR 35 >UniRef50_P15609 Uncharacterized mitochondrial protein ORF8 n=2 Tax=Paramecium RepID=YM08_PARTE Length = 241 Score = 44.4 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 15/37 (40%), Positives = 21/37 (56%) Query: 72 EISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNART 108 + +I + YR RH +GLP RGQRT +NA + Sbjct: 76 RQAANIVTANIIWSYRSWRHFKGLPCRGQRTWSNASS 112 >UniRef50_B9GT74 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9GT74_POPTR Length = 126 Score = 44.0 bits (103), Expect = 0.001, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 31/101 (30%), Gaps = 32/101 (31%) Query: 16 VIALTSIYGVGKTRSKAILAAAGIAEDVKISE---------LSEGQIDTLRDEVAK---- 62 + ALTSI G+G+ + + A + + + ++ Q L VA Sbjct: 1 MFALTSIKGIGRRFANIVCKKADVDMNKRSHSPSLSVLFWLVNYPQQSNLMTIVANPCQF 60 Query: 63 -------------------FVVEGDLRREISMSIKRLMDLG 84 VV L ++ ++ L + Sbjct: 61 KIPDWFLNRQKDYTDGKYSQVVSNALDMKLRDDLECLKKIR 101 >UniRef50_Q9MGA5 Ribosomal protein S13 n=1 Tax=Chrysodidymus synuroideus RepID=Q9MGA5_9STRA Length = 112 Score = 42.1 bits (98), Expect = 0.005, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 33/91 (36%), Gaps = 4/91 (4%) Query: 23 YGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKFVVEGDLRREISMSIKRLMD 82 Y + K + G+ + L+ + K + Sbjct: 11 YKIKFVSKKIVFNKLGLNLKKNRFNIKTNHQKNLQFFLVKLKTSNYTNKTQ----NFFYK 66 Query: 83 LGCYRGLRHRRGLPVRGQRTKTNARTRKGPR 113 + Y+ R+ G P+RGQRT TNA+T+K + Sbjct: 67 IKNYKNFRNLLGYPIRGQRTHTNAKTKKKFK 97 >UniRef50_Q4V607 IP07925p (Fragment) n=10 Tax=Sophophora RepID=Q4V607_DROME Length = 246 Score = 41.7 bits (97), Expect = 0.008, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 20/41 (48%) Query: 22 IYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAK 62 I GVG+ S +L A + + E +E ++D + ++ Sbjct: 1 IKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISN 41 >UniRef50_A9RXP3 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RXP3_PHYPA Length = 52 Score = 41.3 bits (96), Expect = 0.009, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 26/51 (50%) Query: 3 RIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQI 53 I N+ +++ IAL +G+ + I G+ +++K ++L + QI Sbjct: 1 YILRTNLVPNEYVEIALIQNFGLSPKKIIQIYDQLGLNDNIKFNKLIKYQI 51 >UniRef50_B2XX55 Ribosomal protein S13 n=1 Tax=Polysphondylium pallidum RepID=B2XX55_POLPA Length = 144 Score = 40.9 bits (95), Expect = 0.013, Method: Composition-based stats. Identities = 27/115 (23%), Positives = 46/115 (40%), Gaps = 9/115 (7%) Query: 1 MARIAG-INIPDHKHAVIALTS-IYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRD 58 M I I + + K V + I G+ T + + + G+ + +LS L Sbjct: 1 MVIILDQIILNEKKKIVNEIKKEIPGLSYTLATKLCSLCGLLPSITGIKLSTNLNLKLMR 60 Query: 59 EVAKFVVEGDLRREISMSIKRLMDLG----CYRGLRHRRGLPVRGQRTKTNARTR 109 + G K ++ YR LR+++G PV QRT++NA+T Sbjct: 61 LFQTYK--GLYDFNFFNYKKMFNNMRNKDQAYRNLRYKKGYPVN-QRTRSNAKTA 112 >UniRef50_Q2LCP2 Ribosomal protein S13, mitochondrial n=2 Tax=Dictyostelium RepID=RT13_DICCI Length = 170 Score = 40.2 bits (93), Expect = 0.020, Method: Composition-based stats. Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 8/117 (6%) Query: 4 IAGINIPDHKHAVIALTS-IYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAK 62 I I + K + L I G+ ++ ++ +G +K + L + Q + + + Sbjct: 5 IGKIELNSEKQIIGELKKKIKGINLNVAQKVIMLSGNVASLKGNTLLKSQEKQILEILQS 64 Query: 63 FVVEGD----LRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKP 115 F D L+ E I+RL ++ YR +R +G P++G RTK+NA T K P Sbjct: 65 FKGLYDYTYGLKVEALDKIRRLENV--YRYIRVIKGYPIKG-RTKSNANTAKRQASP 118 >UniRef50_Q182T2 Fibronectin-binding protein n=8 Tax=Clostridium RepID=Q182T2_CLOD6 Length = 591 Score = 39.8 bits (92), Expect = 0.027, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 18/39 (46%) Query: 21 SIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDE 59 G+ +K I AG+ ++ I ++S+ Q D L Sbjct: 201 KFLGISPIIAKEICYRAGVNQNAIIKDISDEQFDALHKV 239 >UniRef50_C3NHT6 Type 2 DNA topoisomerase 6 subunit B n=14 Tax=Thermoprotei RepID=TOP6B_SULIN Length = 530 Score = 39.8 bits (92), Expect = 0.027, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 22/48 (45%) Query: 16 VIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKF 63 + +G T + IL AG+ + K+ L+E +I L + K+ Sbjct: 256 EFLVNEFQSIGDTTADKILELAGLKPNKKVKNLTEEEITRLVETFKKY 303 >UniRef50_C6DW13 Formamidopyrimidine-DNA glycosylase n=14 Tax=Actinomycetales RepID=C6DW13_MYCTK Length = 166 Score = 39.4 bits (91), Expect = 0.032, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 4/78 (5%) Query: 22 IYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKFVVEGDLRREISMSIKRLM 81 I G+G S IL A I+ +LS Q+ L + +A V+ +RR + L Sbjct: 51 IAGIGNAYSDEILHVAKISPFATAGKLSGAQLTCLHEAMAS-VLSDAVRRSVGQGAAMLK 109 Query: 82 DLGCYRGLR-HRR-GLPV 97 GLR H R GLP Sbjct: 110 G-EKRSGLRVHARTGLPC 126 >UniRef50_B2XXA3 Ribosomal protein S13 n=2 Tax=Dictyosteliida RepID=B2XXA3_9MYCE Length = 166 Score = 39.4 bits (91), Expect = 0.037, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 42/108 (38%), Gaps = 6/108 (5%) Query: 9 IPDHKHAVIALTS-IYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKFVVEG 67 + K + + I G+G++ +K + + G +S++S L F Sbjct: 11 LNKRKKVLFEIKKKIAGMGESMTKRLCSMCGFLPMTYVSKISTKGGLRLMRIYKSFKGLS 70 Query: 68 DLRREI---SMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGP 112 D + + +R + YR R +G PV QRT+TN + Sbjct: 71 DYSYYVYRKRFNQRRSKE-RAYRSQRFTKGYPV-SQRTRTNGKIASKK 116 >UniRef50_Q45T02 Fibronectin binding protein (Fragment) n=9 Tax=Clostridium difficile RepID=Q45T02_CLODI Length = 141 Score = 39.4 bits (91), Expect = 0.039, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 19/39 (48%) Query: 21 SIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDE 59 G+ +K I AG+ ++ I ++S+ Q D+L Sbjct: 33 RFLGISPIIAKEICYRAGVNQNAIIKDISDEQFDSLHKV 71 >UniRef50_D0U5Z3 Ribosomal protein S13/S18 n=1 Tax=uncultured actinobacterium RepID=D0U5Z3_9ACTN Length = 96 Score = 39.0 bits (90), Expect = 0.045, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 26/48 (54%) Query: 15 AVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAK 62 V + I GVGK +++ IL+ I+E + +L+ Q + + VA+ Sbjct: 48 VVKIIERIPGVGKVKARRILSELDISERCHVGDLTSEQRSIIVERVAQ 95 >UniRef50_A8ABG5 DNA topoisomerase VI, B subunit n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8ABG5_IGNH4 Length = 553 Score = 39.0 bits (90), Expect = 0.052, Method: Composition-based stats. Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 7/89 (7%) Query: 1 MARIAGINIPDHKHAVIALT-SIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDE 59 M RIA + K + LT VG +KAIL+ AG+ D++ +L+E QI L + Sbjct: 265 MKRIAQ--LTTAKTLLQMLTTEFQAVGAKTAKAILSMAGLEPDLEPKKLTEEQIKALVNA 322 Query: 60 VAKFVVEGDLRREISMSI----KRLMDLG 84 + ++ + ++ ++L+ +G Sbjct: 323 MKEYGTTKRYKAPSKEALSPIGEKLIKIG 351 >UniRef50_A4YHK7 Type 2 DNA topoisomerase 6 subunit B n=3 Tax=Thermoprotei RepID=TOP6B_METS5 Length = 531 Score = 38.2 bits (88), Expect = 0.074, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 24/48 (50%) Query: 16 VIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKF 63 + VG+ + +++ AG+ D ++ +L++ Q+ L D + F Sbjct: 256 EFLVKEFQSVGEKTALSVIEMAGLDPDKRVQKLTDDQLSKLVDAMKNF 303 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_O59772 37S ribosomal protein subunit sws2, mitochondria... 142 3e-33 UniRef50_D1I5P5 Whole genome shotgun sequence of line PN40024, s... 136 2e-31 UniRef50_Q1GK06 30S ribosomal protein S13 n=21 Tax=Bacteria RepI... 132 4e-30 UniRef50_A5FRW9 30S ribosomal protein S13 n=691 Tax=cellular org... 131 9e-30 UniRef50_A8F4T6 30S ribosomal protein S13 n=40 Tax=cellular orga... 130 1e-29 UniRef50_Q2JL76 30S ribosomal protein S13 n=276 Tax=cellular org... 130 1e-29 UniRef50_P26872 Ribosomal protein S13, mitochondrial n=3 Tax=Vir... 130 2e-29 UniRef50_B3DVZ3 30S ribosomal protein S13 n=5 Tax=Chlamydiae/Ver... 129 2e-29 UniRef50_A8JDP6 Plastid ribosomal protein S13 n=3 Tax=Viridiplan... 129 3e-29 UniRef50_C1FF43 Ribosomal protein S13, chloroplast n=2 Tax=Micro... 129 3e-29 UniRef50_Q11HS4 30S ribosomal protein S13 n=5 Tax=Proteobacteria... 129 3e-29 UniRef50_P53937 37S ribosomal protein SWS2, mitochondrial n=13 T... 126 2e-28 UniRef50_B1AIP4 30S ribosomal protein S13 n=703 Tax=cellular org... 125 5e-28 UniRef50_Q0UWA4 Putative uncharacterized protein n=1 Tax=Phaeosp... 124 8e-28 UniRef50_P46747 Ribosomal protein S13, mitochondrial n=1 Tax=Pro... 122 2e-27 UniRef50_B0CSU7 Predicted protein n=1 Tax=Laccaria bicolor S238N... 122 2e-27 UniRef50_C8V8H2 40S ribosomal protein S13 (AFU_orthologue; AFUA_... 122 3e-27 UniRef50_Q0W1V6 30S ribosomal protein S13P n=4 Tax=Euryarchaeota... 122 4e-27 UniRef50_Q2GEB8 30S ribosomal protein S13 n=3 Tax=Proteobacteria... 122 4e-27 UniRef50_O21258 Ribosomal protein S13 n=1 Tax=Reclinomonas ameri... 122 4e-27 UniRef50_C5DMG2 KLTH0G08646p n=2 Tax=Saccharomycetaceae RepID=C5... 120 1e-26 UniRef50_P42732 30S ribosomal protein S13, chloroplastic n=11 Ta... 119 2e-26 UniRef50_A8GVD5 30S ribosomal protein S13 n=54 Tax=Bacteria RepI... 119 2e-26 UniRef50_Q74M95 30S ribosomal protein S13P n=1 Tax=Nanoarchaeum ... 117 8e-26 UniRef50_Q0QIP8 Ribosomal protein S13 n=1 Tax=Oltmannsiellopsis ... 117 1e-25 UniRef50_A3LSH2 Predicted protein n=4 Tax=Saccharomycetaceae Rep... 116 2e-25 UniRef50_A3MUT0 30S ribosomal protein S13P n=7 Tax=Thermoprotei ... 116 3e-25 UniRef50_Q6CFI9 YALI0B06578p n=3 Tax=Saccharomycetales RepID=Q6C... 115 5e-25 UniRef50_C0QW17 30S ribosomal protein S13 n=2 Tax=Brachyspira Re... 115 5e-25 UniRef50_B0JY40 30S ribosomal protein S13 n=138 Tax=cellular org... 115 6e-25 UniRef50_C1KRH7 Ribosomal protein S13 n=2 Tax=Micromonas RepID=C... 114 7e-25 UniRef50_Q4Q1Y3 40S ribosomal protein S18, putative n=2 Tax=Euka... 114 9e-25 UniRef50_B2B6R1 Predicted CDS Pa_2_8560 n=1 Tax=Podospora anseri... 114 9e-25 UniRef50_Q8M1G5 Ribosomal protein S13 n=1 Tax=Chaetosphaeridium ... 114 1e-24 UniRef50_A6YEC0 Ribosomal protein S13 n=1 Tax=Chlorokybus atmoph... 113 1e-24 UniRef50_Q2NFZ3 30S ribosomal protein S13P n=9 Tax=Euryarchaeota... 113 2e-24 UniRef50_Q46GC7 30S ribosomal protein S13P n=9 Tax=Methanomicrob... 113 2e-24 UniRef50_D1Z0V5 30S ribosomal protein S13P n=1 Tax=Methanocella ... 112 3e-24 UniRef50_Q601J1 30S ribosomal protein S13 n=8 Tax=Bacteria RepID... 111 6e-24 UniRef50_B0BLG5 Ribosomal protein S13 n=3 Tax=Embryophyta RepID=... 111 8e-24 UniRef50_Q8LPW2 Small ribosomal subunit protein S13, mitochondri... 110 1e-23 UniRef50_A0T0J8 30S ribosomal protein S13, chloroplastic n=2 Tax... 110 1e-23 UniRef50_Q2TUB5 Ribosomal protein S13 n=1 Tax=Dictyota dichotoma... 109 2e-23 UniRef50_Q3S2A2 Ribosomal protein S13 n=1 Tax=Thalassiosira pseu... 109 2e-23 UniRef50_Q0P3I6 Rps13 n=1 Tax=Ostreococcus tauri RepID=Q0P3I6_OSTTA 109 3e-23 UniRef50_A5E736 Putative uncharacterized protein n=1 Tax=Loddero... 109 3e-23 UniRef50_O27999 30S ribosomal protein S13P n=1 Tax=Archaeoglobus... 109 4e-23 UniRef50_B1L794 30S ribosomal protein n=1 Tax=Candidatus Korarch... 109 4e-23 UniRef50_P08977 Ribosomal protein S13, mitochondrial n=165 Tax=E... 108 5e-23 UniRef50_B2MWT5 Ribosomal protein S13 n=1 Tax=Hemiselmis anderse... 108 7e-23 UniRef50_P54019 30S ribosomal protein S13P n=10 Tax=Euryarchaeot... 107 9e-23 UniRef50_C7NZ06 30S ribosomal protein n=3 Tax=Halobacteriaceae R... 107 9e-23 UniRef50_Q9CA19 Small ribosomal subunit protein S13, mitochondri... 107 1e-22 UniRef50_A2E0E1 Ribosomal protein S13p/S18e, putative n=3 Tax=Tr... 106 2e-22 UniRef50_P41094 40S ribosomal protein S18 n=266 Tax=Eukaryota Re... 106 2e-22 UniRef50_A0RY01 30S ribosomal protein S13P n=4 Tax=Thaumarchaeot... 106 3e-22 UniRef50_Q18G53 30S ribosomal protein S13P n=8 Tax=Halobacteriac... 106 3e-22 UniRef50_C1GA05 40S ribosomal protein S13 n=4 Tax=Onygenales Rep... 105 5e-22 UniRef50_Q8SRP2 40S ribosomal protein S18 n=1 Tax=Encephalitozoo... 104 8e-22 UniRef50_Q9HJD6 30S ribosomal protein S13P n=6 Tax=Euryarchaeota... 104 1e-21 UniRef50_B6JWK5 Mitochondrial 37S ribosomal protein SWS2 n=1 Tax... 104 1e-21 UniRef50_Q6UVP6 Ribosomal protein S13 n=1 Tax=Pseudendoclonium a... 104 1e-21 UniRef50_Q5MF08 Ribosomal protein S13 (Fragment) n=2 Tax=Magnoli... 103 1e-21 UniRef50_Q2TUF4 Ribosomal protein S13 n=11 Tax=Phaeophyceae RepI... 103 2e-21 UniRef50_C6UN26 30S ribosomal protein n=1 Tax=Candidatus Hodgkin... 102 3e-21 UniRef50_Q5K8M7 30s ribosomal protein s13, putative n=1 Tax=Filo... 102 4e-21 UniRef50_B6HVE9 Pc22g19050 protein n=20 Tax=Leotiomyceta RepID=B... 101 6e-21 UniRef50_Q6LXN1 30S ribosomal protein S13P n=7 Tax=Methanococcus... 101 7e-21 UniRef50_B3T3X1 Putative ribosomal protein S13/S18 n=1 Tax=uncul... 101 8e-21 UniRef50_Q9G886 Ribosomal protein S13 n=1 Tax=Malawimonas jakobi... 101 8e-21 UniRef50_P62269 40S ribosomal protein S18 n=58 Tax=Coelomata Rep... 101 9e-21 UniRef50_D1J904 30S ribosomal protein n=1 Tax=uncultured archaeo... 101 1e-20 UniRef50_Q05FK2 30S ribosomal protein S13 n=1 Tax=Candidatus Car... 100 1e-20 UniRef50_C4V7B3 Putative uncharacterized protein n=1 Tax=Nosema ... 100 2e-20 UniRef50_Q8W9S0 Ribosomal protein S13 n=1 Tax=Mesostigma viride ... 98 7e-20 UniRef50_A4ZHE7 Ribosomal protein S13 n=4 Tax=Phytophthora RepID... 98 7e-20 UniRef50_B7XLD6 SSU ribosomal protein S13P n=2 Tax=Enterocytozoo... 98 7e-20 UniRef50_Q6E792 Ribosomal protein S13 n=1 Tax=Saprolegnia ferax ... 97 1e-19 UniRef50_D2JP71 Ribosomal protein S13 n=1 Tax=Synedra acus RepID... 97 1e-19 UniRef50_A8NES7 Putative uncharacterized protein n=3 Tax=Agarico... 97 2e-19 UniRef50_Q0DPA4 Os03g0704000 protein n=1 Tax=Oryza sativa Japoni... 96 3e-19 UniRef50_A0SNY5 30S ribosomal protein n=1 Tax=Candidatus Micrarc... 96 4e-19 UniRef50_A8J3J1 Mitochondrial ribosomal protein S13 n=1 Tax=Chla... 96 5e-19 UniRef50_A1RWT9 30S ribosomal protein S13P n=17 Tax=Archaea RepI... 93 2e-18 UniRef50_A8BZ58 Ribosomal protein S18 n=2 Tax=Giardia intestinal... 90 2e-17 UniRef50_Q09F78 Ribosomal protein S13 n=5 Tax=Tetrahymena RepID=... 89 3e-17 UniRef50_B8D6G1 30S ribosomal protein n=1 Tax=Desulfurococcus ka... 87 2e-16 UniRef50_D2EFK4 30S ribosomal protein n=2 Tax=Candidatus Parvarc... 86 3e-16 UniRef50_B5SQ48 Ribosomal protein S13 n=2 Tax=unclassified Blast... 86 4e-16 UniRef50_A0EBZ1 Chromosome undetermined scaffold_89, whole genom... 81 9e-15 UniRef50_Q3LW54 Ribosomal protein S18 n=1 Tax=Bigelowiella natan... 81 9e-15 UniRef50_Q9G8U6 Ribosomal protein S13 n=1 Tax=Rhodomonas salina ... 79 4e-14 UniRef50_Q9G4D3 Ribosomal protein S13 n=1 Tax=Thraustochytrium a... 76 4e-13 UniRef50_Q9G904 Ribosomal protein S13 n=1 Tax=Ochromonas danica ... 74 1e-12 UniRef50_C0PQ42 Putative uncharacterized protein n=1 Tax=Picea s... 72 4e-12 UniRef50_B3H631 Uncharacterized protein At5g14320.2 n=1 Tax=Arab... 71 1e-11 UniRef50_Q8H583 Ribosomal protein S18-like n=2 Tax=Eukaryota Rep... 70 2e-11 UniRef50_B7P1K9 40S ribosomal protein S18, putative (Fragment) n... 69 3e-11 UniRef50_Q9G8P6 Ribosomal protein S13 n=1 Tax=Naegleria gruberi ... 68 7e-11 UniRef50_P46760 Ribosomal protein S13, mitochondrial n=1 Tax=Aca... 68 9e-11 UniRef50_Q8M0B4 Ribosomal protein S13 n=1 Tax=Amoebidium parasit... 67 2e-10 UniRef50_A6RYD3 Putative uncharacterized protein n=1 Tax=Botryot... 66 3e-10 UniRef50_Q8HIT6 Ribosomal protein S13 n=1 Tax=Monosiga brevicoll... 65 8e-10 UniRef50_B9GT74 Predicted protein n=1 Tax=Populus trichocarpa Re... 56 4e-07 UniRef50_P15609 Uncharacterized mitochondrial protein ORF8 n=2 T... 55 8e-07 UniRef50_C0S1M2 40S ribosomal protein S13 n=1 Tax=Paracoccidioid... 54 2e-06 Sequences not found previously or not previously below threshold: UniRef50_Q4V607 IP07925p (Fragment) n=10 Tax=Sophophora RepID=Q4... 46 5e-04 UniRef50_B2XX55 Ribosomal protein S13 n=1 Tax=Polysphondylium pa... 45 9e-04 UniRef50_A4BF40 30S ribosomal protein S13 (Fragment) n=4 Tax=cel... 43 0.002 UniRef50_Q9MGA5 Ribosomal protein S13 n=1 Tax=Chrysodidymus synu... 43 0.003 UniRef50_Q2LCP2 Ribosomal protein S13, mitochondrial n=2 Tax=Dic... 40 0.026 UniRef50_B9GT75 Predicted protein n=1 Tax=Populus trichocarpa Re... 39 0.035 UniRef50_B2XXA3 Ribosomal protein S13 n=2 Tax=Dictyosteliida Rep... 39 0.049 UniRef50_C3NHT6 Type 2 DNA topoisomerase 6 subunit B n=14 Tax=Th... 39 0.068 UniRef50_A9RXP3 Predicted protein (Fragment) n=1 Tax=Physcomitre... 38 0.080 UniRef50_A4YHK7 Type 2 DNA topoisomerase 6 subunit B n=3 Tax=The... 38 0.089 >UniRef50_O59772 37S ribosomal protein subunit sws2, mitochondrial n=1 Tax=Schizosaccharomyces pombe RepID=SWS2_SCHPO Length = 151 Score = 142 bits (359), Expect = 3e-33, Method: Composition-based stats. Identities = 46/118 (38%), Positives = 70/118 (59%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M I G+ + D K AL S YG+G +++ I A +++ EL+ Q+ TL + Sbjct: 1 MVYILGVAVNDDKPVRFALLSFYGIGHAKAEEICAKLSFHNTLRVRELTNVQLTTLSQLL 60 Query: 61 AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIKK 118 + +EGDLRR+ + I RL+++ CYRG+RH GLPV GQ T+TNA+T K K ++ Sbjct: 61 SGMTIEGDLRRQRNADISRLVNIRCYRGMRHVNGLPVNGQNTRTNAKTAKKLNKVPRR 118 >UniRef50_D1I5P5 Whole genome shotgun sequence of line PN40024, scaffold_151.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D1I5P5_VITVI Length = 912 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 38/141 (26%), Positives = 60/141 (42%), Gaps = 23/141 (16%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + R+ N+ + + ALTSI G+G+ + + A + + + ELS +++ L V Sbjct: 772 ILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAAELENLMVIV 831 Query: 61 AK-----------------------FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPV 97 A VV L ++ ++RL + +RGLRH GL V Sbjct: 832 ANPRQFKIPDWFLNRKKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 891 Query: 98 RGQRTKTNARTRKGPRKPIKK 118 RGQ TKT R K K+ Sbjct: 892 RGQHTKTTGRRGKTVGVSKKR 912 >UniRef50_Q1GK06 30S ribosomal protein S13 n=21 Tax=Bacteria RepID=RS13_SILST Length = 122 Score = 132 bits (332), Expect = 4e-30, Method: Composition-based stats. Identities = 71/117 (60%), Positives = 86/117 (73%), Gaps = 1/117 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 MARIAG+NIP K IALT I G+G +KAI A I +++ELS+ ++ +R+ + Sbjct: 1 MARIAGVNIPTAKRVPIALTYITGIGPASAKAICEAVNIDATRRVNELSDAEVLAIREHI 60 Query: 61 A-KFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 + VEGDLRRE+ M+IKRLMDLGCYRGLRHRR LPVRGQRT TNARTRKGP K I Sbjct: 61 DATYTVEGDLRREVQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAI 117 >UniRef50_A5FRW9 30S ribosomal protein S13 n=691 Tax=cellular organisms RepID=RS13_DEHSB Length = 129 Score = 131 bits (329), Expect = 9e-30, Method: Composition-based stats. Identities = 62/117 (52%), Positives = 93/117 (79%), Gaps = 1/117 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M RIAG +IPD+K +L I+G+G RS+ +L AG+ + +++++L++ +I+ LR+ + Sbjct: 1 MVRIAGTDIPDNKQVYFSLQYIFGIGPARSEKVLVQAGVDKTIRVNKLTDEEINRLREII 60 Query: 61 AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 K + VEGDLR+EI+++IKRL+D+GCYRG+RH+ LPVRGQRTKTNARTR+GPRK + Sbjct: 61 DKEYRVEGDLRKEITLNIKRLIDIGCYRGIRHKHNLPVRGQRTKTNARTRRGPRKTV 117 >UniRef50_A8F4T6 30S ribosomal protein S13 n=40 Tax=cellular organisms RepID=RS13_THELT Length = 128 Score = 130 bits (328), Expect = 1e-29, Method: Composition-based stats. Identities = 59/119 (49%), Positives = 84/119 (70%), Gaps = 1/119 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 MARI G+ +P +K +ALT +YGVG+TR+ IL GI D ++ +L++ ++ + + Sbjct: 1 MARIVGVELPGNKKCFVALTYLYGVGRTRAFEILKNTGINPDKRVKDLTDEEVSKITKFI 60 Query: 61 AKF-VVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIKK 118 VEG+LR +I+ +IKRL+D+GCYRG RH+ GLPVRGQRT++NARTRKGPR K Sbjct: 61 QDHYKVEGELRTDINRNIKRLIDIGCYRGFRHKLGLPVRGQRTRSNARTRKGPRPSRIK 119 >UniRef50_Q2JL76 30S ribosomal protein S13 n=276 Tax=cellular organisms RepID=RS13_SYNJB Length = 127 Score = 130 bits (328), Expect = 1e-29, Method: Composition-based stats. Identities = 69/117 (58%), Positives = 88/117 (75%), Gaps = 1/117 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 MARIAG++IP K IALT IYG+G TRS+ ILA GI D + +L++ ++ LR V Sbjct: 1 MARIAGVDIPREKRVEIALTYIYGIGLTRSRQILAKTGINPDTRTRDLTDAEVAALRTVV 60 Query: 61 A-KFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 ++ VEGDLRR+ +M+IKRL+D+G YRG RHR GLPVRGQRT+TNARTRKG RK + Sbjct: 61 EGEYQVEGDLRRQEAMNIKRLIDIGTYRGRRHRLGLPVRGQRTRTNARTRKGVRKTV 117 >UniRef50_P26872 Ribosomal protein S13, mitochondrial n=3 Tax=Viridiplantae RepID=RT13_MARPO Length = 120 Score = 130 bits (327), Expect = 2e-29, Method: Composition-based stats. Identities = 45/119 (37%), Positives = 76/119 (63%), Gaps = 1/119 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M+ I G N+ +K IALT I+G+G ++ + G+++ +K+++L++ Q D + + Sbjct: 1 MSYILGTNLNSNKQVKIALTRIFGIGPKKAIQVCDQLGLSDTIKVNKLTKYQFDQILKII 60 Query: 61 A-KFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIKK 118 + ++V+ +L+R I IKRL+ +GCYRG RH GLP+RGQRT TNA+T + R + Sbjct: 61 SQNYLVDSELKRVIQRDIKRLISIGCYRGFRHNAGLPLRGQRTHTNAKTCRKLRYVSIR 119 >UniRef50_B3DVZ3 30S ribosomal protein S13 n=5 Tax=Chlamydiae/Verrucomicrobia group RepID=RS13_METI4 Length = 131 Score = 129 bits (326), Expect = 2e-29, Method: Composition-based stats. Identities = 64/118 (54%), Positives = 83/118 (70%), Gaps = 2/118 (1%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 MARI G+ IP +K + AL IYG+G++R+K I A + ++ +L+ QI+ + + Sbjct: 1 MARILGVEIPGNKPLISALPVIYGIGRSRAKLICEQAELNPQMRAKDLTNQQINRIIQVI 60 Query: 61 AK--FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 + FVVEGDLRREI +IKRL + CYRG+RH RGLPVRGQRT TNARTRKGPRK I Sbjct: 61 EENGFVVEGDLRREIQQNIKRLQSIRCYRGIRHIRGLPVRGQRTSTNARTRKGPRKTI 118 >UniRef50_A8JDP6 Plastid ribosomal protein S13 n=3 Tax=Viridiplantae RepID=A8JDP6_CHLRE Length = 164 Score = 129 bits (325), Expect = 3e-29, Method: Composition-based stats. Identities = 59/115 (51%), Positives = 80/115 (69%), Gaps = 1/115 (0%) Query: 2 ARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVA 61 R+ + IP+ K ++L I+G+G+T ++ IL G+ E+ K EL+E +I+ LR EV Sbjct: 43 LRVNNVEIPNSKRIEVSLQYIFGIGETTAQTILRDTGV-ENKKTYELNEEEINKLRSEVE 101 Query: 62 KFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 K+ E DLRR ++ +IKRL D+GCYRG RH GLPVRGQRTKTNARTRKG K + Sbjct: 102 KYTTEADLRRVVAQNIKRLKDIGCYRGRRHIMGLPVRGQRTKTNARTRKGKAKTV 156 >UniRef50_C1FF43 Ribosomal protein S13, chloroplast n=2 Tax=Micromonas RepID=C1FF43_9CHLO Length = 176 Score = 129 bits (325), Expect = 3e-29, Method: Composition-based stats. Identities = 63/115 (54%), Positives = 85/115 (73%), Gaps = 1/115 (0%) Query: 2 ARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVA 61 AR+AG+ IP++K A IALT +YG+G T +K I+A G+ E+ ++ E E ++ LR EV Sbjct: 58 ARVAGVEIPNNKKAEIALTYVYGIGNTTAKKIMAKTGL-ENKRVREFEEEELTILRAEVD 116 Query: 62 KFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 +++EGDLRR ++IKRL ++ CYRG RH RGLPVRGQRTKTNARTRKG K + Sbjct: 117 TYMIEGDLRRFNMLNIKRLKEIQCYRGRRHIRGLPVRGQRTKTNARTRKGKVKTV 171 >UniRef50_Q11HS4 30S ribosomal protein S13 n=5 Tax=Proteobacteria RepID=RS13_MESSB Length = 122 Score = 129 bits (325), Expect = 3e-29, Method: Composition-based stats. Identities = 70/117 (59%), Positives = 92/117 (78%), Gaps = 1/117 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 MARIAG+NIP +K VIAL I+G+G ++ I + GI +D ++ +L++ ++ +R+ + Sbjct: 1 MARIAGVNIPTNKRVVIALQYIHGIGPKLAREITSKVGIPDDRRVHQLTDAEVLAIREAI 60 Query: 61 AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 + + VEGDLRRE+SM+IKRLMDLGCYRGLRHRR LPVRGQRT TNARTRKGP KPI Sbjct: 61 DRDYQVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKPI 117 >UniRef50_P53937 37S ribosomal protein SWS2, mitochondrial n=13 Tax=Saccharomycetales RepID=SWS2_YEAST Length = 143 Score = 126 bits (317), Expect = 2e-28, Method: Composition-based stats. Identities = 39/118 (33%), Positives = 62/118 (52%), Gaps = 1/118 (0%) Query: 2 ARIAGINIPDHKHAVIALT-SIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 I G + IAL YG+GKT ++ I + G +++ +LSE QI ++ E+ Sbjct: 3 VHILGKGFKGKEVIKIALASKFYGIGKTTAEKICSKLGFYPWMRMHQLSEPQIMSIASEL 62 Query: 61 AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIKK 118 + +EGD R + +I +G Y G+RH LPVRGQ T+ NA+T + K ++ Sbjct: 63 STMTIEGDARAIVKDNIALKRKIGSYSGMRHTLHLPVRGQHTRNNAKTARKLNKIDRR 120 >UniRef50_B1AIP4 30S ribosomal protein S13 n=703 Tax=cellular organisms RepID=RS13_UREP2 Length = 132 Score = 125 bits (314), Expect = 5e-28, Method: Composition-based stats. Identities = 69/124 (55%), Positives = 92/124 (74%), Gaps = 8/124 (6%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 MARI G++IP+ K VI+LT I+G+GK+ S+ IL A I E++++ +L++ QI +R Sbjct: 1 MARILGVDIPNDKRVVISLTYIFGIGKSTSQQILKLANIDENIRVKDLADEQIAEIRRVA 60 Query: 61 AKFV--------VEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGP 112 FV +EGDLRR ++M IKRLM++G YRG+RHRRGLPVRGQRTKTNARTRKGP Sbjct: 61 LNFVKANGEKLQLEGDLRRTVAMDIKRLMEIGSYRGIRHRRGLPVRGQRTKTNARTRKGP 120 Query: 113 RKPI 116 RK + Sbjct: 121 RKTV 124 >UniRef50_Q0UWA4 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum RepID=Q0UWA4_PHANO Length = 163 Score = 124 bits (312), Expect = 8e-28, Method: Composition-based stats. Identities = 42/118 (35%), Positives = 62/118 (52%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M + G N + +L S +G+G S+ ++A I K+ L + L E+ Sbjct: 1 MVFLNGFNFTEATLVKRSLESFFGIGPKVSQGLMAKFHIHPWAKVGSLKNTTVLELTAEL 60 Query: 61 AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIKK 118 + +E DLRRE+ +I+RL D+G YRG RH GLPVRGQRT+T T + K + Sbjct: 61 SNMKIENDLRREVQENIRRLKDMGTYRGRRHAMGLPVRGQRTRTQITTARKLNKGRTR 118 >UniRef50_P46747 Ribosomal protein S13, mitochondrial n=1 Tax=Prototheca wickerhamii RepID=RT13_PROWI Length = 119 Score = 122 bits (308), Expect = 2e-27, Method: Composition-based stats. Identities = 41/118 (34%), Positives = 61/118 (51%), Gaps = 1/118 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M I ++ D K A IYG+G I G++ + ++ LS GQ L + Sbjct: 1 MVYIQNTHLNDKKQIYQACAQIYGLGHHHCLQICDVLGVSPETRLGMLSTGQHTLLAQII 60 Query: 61 A-KFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIK 117 + D+RR +I+RL+++ YRG RH +GLPVRGQR+ NART + + IK Sbjct: 61 TQNYDTGSDVRRFTRQNIQRLVNIHSYRGYRHIQGLPVRGQRSHGNARTVRKLKNVIK 118 >UniRef50_B0CSU7 Predicted protein n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0CSU7_LACBS Length = 112 Score = 122 bits (308), Expect = 2e-27, Method: Composition-based stats. Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 6/117 (5%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M I G+N+PD+ A ALT YG+G + + A + + K+ +LS Q+ +L + Sbjct: 1 MVHILGVNLPDNHLARFALTKFYGIGHKTAHRLCARLQVHDKCKVKDLSPFQVTSLASFL 60 Query: 61 AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIK 117 + REI +I +G Y G RH LPVRGQ T++NA+T K + + Sbjct: 61 S------APAREIRENIAHQRMIGSYVGKRHAMHLPVRGQNTQSNAKTAKKLNQLDR 111 >UniRef50_C8V8H2 40S ribosomal protein S13 (AFU_orthologue; AFUA_4G07640) n=6 Tax=Leotiomyceta RepID=C8V8H2_EMENI Length = 119 Score = 122 bits (307), Expect = 3e-27, Method: Composition-based stats. Identities = 42/118 (35%), Positives = 65/118 (55%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M I G+N P+ + +L +GVG S I++ I + K+ EL+ Q+ L + Sbjct: 1 MVFILGVNFPEGQLVQKSLQKFFGVGPQVSSRIMSRFHIHQTCKVGELANKQVLDLTAVL 60 Query: 61 AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIKK 118 ++ +E DLRR++ IKRL + G YRG RH GLPVRGQRT+ N + + ++ Sbjct: 61 SEMKIENDLRRQVLDDIKRLKETGTYRGRRHALGLPVRGQRTRNNNKIAIRLNRIDRR 118 >UniRef50_Q0W1V6 30S ribosomal protein S13P n=4 Tax=Euryarchaeota RepID=RS13_UNCMA Length = 224 Score = 122 bits (306), Expect = 4e-27, Method: Composition-based stats. Identities = 38/140 (27%), Positives = 54/140 (38%), Gaps = 22/140 (15%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + RIA ++ + ALT I G+G SK I A + + L Q+D LR + Sbjct: 72 IVRIANTDLDGTQTVEFALTGIKGIGNRISKIIARQAQVDPHATMGYLPPEQVDKLRAVI 131 Query: 61 AK----------------------FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVR 98 + DL + I + + Y+G+RH RG VR Sbjct: 132 DNLEANVPVWMLNRRRDIYTGEDKHLYGVDLTMAVKEDINIMKKIRSYKGIRHERGQKVR 191 Query: 99 GQRTKTNARTRKGPRKPIKK 118 GQRTK+ RT KK Sbjct: 192 GQRTKSTGRTGATVGVVRKK 211 >UniRef50_Q2GEB8 30S ribosomal protein S13 n=3 Tax=Proteobacteria RepID=RS13_NEOSM Length = 123 Score = 122 bits (306), Expect = 4e-27, Method: Composition-based stats. Identities = 50/115 (43%), Positives = 79/115 (68%), Gaps = 1/115 (0%) Query: 3 RIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAK 62 R G+N+PD+K V+ALT +YG+G ++ I ++ I K+ +L + Q++++ + Sbjct: 2 RFLGVNLPDNKAVVVALTYLYGIGLPTARKICSSLAIDGSAKLPDLEQEQLNSIMAYIKN 61 Query: 63 FVV-EGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 + EG+LR+ ++ SIK L+D+ CYRG+RHR+ LPVRGQRT+TNARTRKG + Sbjct: 62 DIPFEGELRKSVAFSIKHLVDIKCYRGVRHRKNLPVRGQRTRTNARTRKGKVRVP 116 >UniRef50_O21258 Ribosomal protein S13 n=1 Tax=Reclinomonas americana RepID=O21258_RECAM Length = 122 Score = 122 bits (306), Expect = 4e-27, Method: Composition-based stats. Identities = 49/117 (41%), Positives = 72/117 (61%), Gaps = 1/117 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M + GINI +K AL +IYG+G + + + G+ +K+S+L+E QI L + Sbjct: 1 MIHLFGININSNKKIPFALKAIYGLGNKKVDELCSYMGLNPKLKMSDLNESQISKLCHYI 60 Query: 61 A-KFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 F++E +LR+ + +IKRL+D+ YRGLRH GLPV GQRT TNA+T+K K Sbjct: 61 EENFLIESELRKNQTYNIKRLLDIKSYRGLRHAYGLPVHGQRTHTNAKTQKSLSKRR 117 >UniRef50_C5DMG2 KLTH0G08646p n=2 Tax=Saccharomycetaceae RepID=C5DMG2_LACTC Length = 149 Score = 120 bits (302), Expect = 1e-26, Method: Composition-based stats. Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 1/118 (0%) Query: 2 ARIAGINIPDHKHAVIALT-SIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 I G + IAL YG+G S+ + A G +++ +LSE QI ++ E+ Sbjct: 3 VHILGKGFKGKEVIKIALASKFYGIGLKTSETLCAKLGFYPWMRMHQLSEPQIMSITSEL 62 Query: 61 AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIKK 118 + +EG+ R + +I +G Y+G+RH LPVRGQ T+ NA+T + + ++ Sbjct: 63 STMTIEGNARAVVKENIALKRRIGSYQGMRHALNLPVRGQHTRNNAKTARRLNRVDRR 120 >UniRef50_P42732 30S ribosomal protein S13, chloroplastic n=11 Tax=Spermatophyta RepID=RR13_ARATH Length = 169 Score = 119 bits (300), Expect = 2e-26, Method: Composition-based stats. Identities = 50/107 (46%), Positives = 77/107 (71%), Gaps = 1/107 (0%) Query: 2 ARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVA 61 AR+ G+ IP +K +L I+G+G+TR++ IL + E+ +++E ++ LRDEV+ Sbjct: 48 ARVGGVEIPANKRIEYSLQYIHGIGRTRARQILVDLQM-ENKITKDMAEEELIILRDEVS 106 Query: 62 KFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNART 108 K+++EGDLRR +++IKRL ++ CYRG+RH +GLP RGQRTK N RT Sbjct: 107 KYMIEGDLRRFNALAIKRLKEIQCYRGVRHIQGLPCRGQRTKNNCRT 153 >UniRef50_A8GVD5 30S ribosomal protein S13 n=54 Tax=Bacteria RepID=RS13_RICB8 Length = 125 Score = 119 bits (300), Expect = 2e-26, Method: Composition-based stats. Identities = 60/117 (51%), Positives = 84/117 (71%), Gaps = 1/117 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 MARIA +NIPD+K V++LT IYG+G T +K I A I ED K+ +L++ ++ +LR+ + Sbjct: 1 MARIASVNIPDNKRLVVSLTYIYGLGTTMAKTICKKAKILEDKKVKDLTDQELISLRNII 60 Query: 61 AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 + VEGDLRRE++++IK+ D+ Y+GLRH R LPVRGQ T +NARTRKG I Sbjct: 61 ENEYKVEGDLRREVTLNIKKKKDIRSYQGLRHIRKLPVRGQNTHSNARTRKGKAVAI 117 >UniRef50_Q74M95 30S ribosomal protein S13P n=1 Tax=Nanoarchaeum equitans RepID=RS13_NANEQ Length = 153 Score = 117 bits (295), Expect = 8e-26, Method: Composition-based stats. Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 23/141 (16%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + IA +++ HK + L + GV + A+ AA GI + KI LS+ +++ L D + Sbjct: 13 IVHIADVDLDGHKPIYVELRKVVGVNWMFAHAVCAALGIDKWRKIGSLSDEELEKLEDAL 72 Query: 61 AK-----------------------FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPV 97 +V D + + IKR M + +RG RHR GLPV Sbjct: 73 RNPWKYGIPSWLYNRRRDPETGKDLHLVGNDYKITMEFDIKREMQINSWRGYRHREGLPV 132 Query: 98 RGQRTKTNARTRKGPRKPIKK 118 RGQRT+++ R + KK Sbjct: 133 RGQRTRSHHRKGRTVGVIKKK 153 >UniRef50_Q0QIP8 Ribosomal protein S13 n=1 Tax=Oltmannsiellopsis viridis RepID=Q0QIP8_OLTVI Length = 117 Score = 117 bits (294), Expect = 1e-25, Method: Composition-based stats. Identities = 40/117 (34%), Positives = 59/117 (50%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M I D K +L G+G ++ I G+A + +S L+ QI L + Sbjct: 1 MKYILQTPCDDKKPLKASLQKFLGIGPKKAIEICDKLGVASSMNLSSLNAYQIHVLTGIL 60 Query: 61 AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIK 117 + + +RR+ +I+RL+ + YRG RH GLP RGQRTKTNA T + + IK Sbjct: 61 NSYDIRHSVRRKKRENIQRLVRISSYRGFRHTAGLPCRGQRTKTNANTARKFKFKIK 117 >UniRef50_A3LSH2 Predicted protein n=4 Tax=Saccharomycetaceae RepID=A3LSH2_PICST Length = 122 Score = 116 bits (291), Expect = 2e-25, Method: Composition-based stats. Identities = 42/117 (35%), Positives = 66/117 (56%), Gaps = 1/117 (0%) Query: 2 ARIAGINIPDHKHAVIALTS-IYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + G +I + I L I+G+G ++ I A GI +++++LSE QI L E+ Sbjct: 3 VHVFGKSIKHNSLVRIGLAKAIFGIGYQTAERICAKVGIYPQMRMNQLSEPQIMDLNKEI 62 Query: 61 AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIK 117 + +VEG L+++I+ I+ D+G Y G RH +GLPVRGQ T+ NA T K + Sbjct: 63 SDLLVEGHLKQKINNDIRMKRDIGSYSGFRHAQGLPVRGQGTRNNAATAGKLNKLER 119 >UniRef50_A3MUT0 30S ribosomal protein S13P n=7 Tax=Thermoprotei RepID=RS13_PYRCJ Length = 153 Score = 116 bits (290), Expect = 3e-25, Method: Composition-based stats. Identities = 35/140 (25%), Positives = 51/140 (36%), Gaps = 22/140 (15%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + RI ++ +K AL I G+G + AI GI + L E QI+ L V Sbjct: 8 IVRIGDTDLDGNKTVAYALAKIRGIGIATAYAICRKLGIDPHATLGLLPEDQINKLDWAV 67 Query: 61 AK----------------------FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVR 98 ++ +L + + L ++G+RH GL VR Sbjct: 68 RNLHELAPAWFLNRRKDPETGRDLHLIGSELVLAAKRDVDLMKKLKSWKGIRHSLGLKVR 127 Query: 99 GQRTKTNARTRKGPRKPIKK 118 GQRT T R KK Sbjct: 128 GQRTVTTGRFGATAGVTKKK 147 >UniRef50_Q6CFI9 YALI0B06578p n=3 Tax=Saccharomycetales RepID=Q6CFI9_YARLI Length = 156 Score = 115 bits (288), Expect = 5e-25, Method: Composition-based stats. Identities = 34/119 (28%), Positives = 63/119 (52%), Gaps = 2/119 (1%) Query: 2 ARIAGINIPDHKHAVIAL-TSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 I G + L ++GVG ++K + A G+ +++ EL++G I + E+ Sbjct: 3 VHIMGKRFQNTWKVSYGLSQQVFGVGPFQAKRLCAKIGLYPGMRMGELTQGDIMAIVKEL 62 Query: 61 AKFV-VEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIKK 118 + V +E DL ++I+ I+R G Y G RH G+PV+GQ+T+TN + + + ++ Sbjct: 63 STNVTIESDLAKKINADIERKRKTGSYVGRRHVMGMPVKGQKTRTNGKNARRFNRVPRR 121 >UniRef50_C0QW17 30S ribosomal protein S13 n=2 Tax=Brachyspira RepID=C0QW17_BRAHW Length = 125 Score = 115 bits (288), Expect = 5e-25, Method: Composition-based stats. Identities = 50/108 (46%), Positives = 69/108 (63%), Gaps = 1/108 (0%) Query: 5 AGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVA-KF 63 G+ I ++K IALT IYG+G+T + I A I +K +L++ QI LRD + Sbjct: 1 MGVEIRNNKRIEIALTDIYGIGRTLAHVICDKANIDYSIKAKDLTDAQITALRDAIEATT 60 Query: 64 VVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKG 111 VEGDLR E+ +IKRL D+ YRG+RH + LPV GQRT+TN+R +G Sbjct: 61 KVEGDLRTELYNNIKRLKDIHSYRGMRHIKRLPVHGQRTRTNSRNARG 108 >UniRef50_B0JY40 30S ribosomal protein S13 n=138 Tax=cellular organisms RepID=RS13_MICAN Length = 127 Score = 115 bits (288), Expect = 6e-25, Method: Composition-based stats. Identities = 52/101 (51%), Positives = 72/101 (71%), Gaps = 1/101 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 MARIAG+++P K IALT +YGVG +RS+ +L+A G+ D ++ +LS+ + LR + Sbjct: 1 MARIAGVDLPRDKRVEIALTYLYGVGLSRSQEVLSATGVNPDTRVKDLSDEDVAALRTYI 60 Query: 61 A-KFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQ 100 + +EGDLRR +M+IKRL D+G YRG RHR GLPVRGQ Sbjct: 61 ETNYQIEGDLRRWEAMNIKRLADIGTYRGRRHRLGLPVRGQ 101 >UniRef50_C1KRH7 Ribosomal protein S13 n=2 Tax=Micromonas RepID=C1KRH7_9CHLO Length = 120 Score = 114 bits (287), Expect = 7e-25, Method: Composition-based stats. Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 1/119 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M N+ + ALT IYG+G + + G+ + + L+ Q+D L + Sbjct: 1 MVFFMQQNLRPNIKVRNALTQIYGIGSFTANQVCDQLGLRSSLLVKHLNGAQLDQLARVI 60 Query: 61 AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIKK 118 + V +L R I I R + + Y+G R +GLPVRGQRT TNAR + +KPI + Sbjct: 61 NRFHVTGQELERVIQQDISRFVRISIYKGFRFTQGLPVRGQRTHTNARNTRKKKKPILR 119 >UniRef50_Q4Q1Y3 40S ribosomal protein S18, putative n=2 Tax=Eukaryota RepID=Q4Q1Y3_LEIMA Length = 218 Score = 114 bits (286), Expect = 9e-25, Method: Composition-based stats. Identities = 28/141 (19%), Positives = 54/141 (38%), Gaps = 23/141 (16%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + R+ N+ + AL + GVG + + AGI + + L+ +++ + + + Sbjct: 78 IVRLLNTNVEGKRKVPFALRMVKGVGIRFAYLVCKKAGIDVERRAGTLTAEELEKIAEII 137 Query: 61 -----------------------AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPV 97 + + + + ++RL + +RG+RH GL V Sbjct: 138 ADPAKFKIPDWFLNRQRDPKTGKTEHLSSSMVDTRLRDDLERLKKMRAHRGVRHAYGLRV 197 Query: 98 RGQRTKTNARTRKGPRKPIKK 118 RGQ T T+ R K K Sbjct: 198 RGQHTCTSGRHGKTVGVSRGK 218 >UniRef50_B2B6R1 Predicted CDS Pa_2_8560 n=1 Tax=Podospora anserina RepID=B2B6R1_PODAN Length = 119 Score = 114 bits (286), Expect = 9e-25, Method: Composition-based stats. Identities = 43/118 (36%), Positives = 60/118 (50%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M + G+N + K AL Y +G + I+A I KI LS + L E+ Sbjct: 1 MVSLFGVNFHEAKLVQKALQHFYALGSQTATRIMAKHSIHPRAKIGTLSPKTVTALTAEL 60 Query: 61 AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIKK 118 + V+E D R+ I +IKRL D+G YRG RH LPVRGQRT+ +T + +K Sbjct: 61 STMVIESDARKIIQDNIKRLRDMGTYRGRRHAMNLPVRGQRTRNQNKTAIKLNRVERK 118 >UniRef50_Q8M1G5 Ribosomal protein S13 n=1 Tax=Chaetosphaeridium globosum RepID=Q8M1G5_CHAGL Length = 122 Score = 114 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 40/109 (36%), Positives = 70/109 (64%), Gaps = 1/109 (0%) Query: 10 PDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVA-KFVVEGD 68 + K AL +YG+G+ ++ I + G++ +K+++L+ Q D L ++ F++E + Sbjct: 14 NNKKQLRFALIQLYGIGRAKASFICSLLGVSPFIKVNQLTRFQTDELNKIISSNFLIELE 73 Query: 69 LRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIK 117 L+R + I+RL+ +GCYRGLRH GLP+RGQRT TNA+T + + ++ Sbjct: 74 LKRIVQTDIRRLVTIGCYRGLRHIAGLPLRGQRTHTNAKTARRLQLKLR 122 >UniRef50_A6YEC0 Ribosomal protein S13 n=1 Tax=Chlorokybus atmophyticus RepID=A6YEC0_CHLAT Length = 121 Score = 113 bits (284), Expect = 1e-24, Method: Composition-based stats. Identities = 45/112 (40%), Positives = 64/112 (57%), Gaps = 1/112 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M+ I+ K IAL ++G+G + S I G +E+ + +LS+ QID L V Sbjct: 1 MSYNLQIDFYSKKKIRIALRQLFGIGPSLSNQICDQLGFSENTTVDQLSKSQIDRLTRLV 60 Query: 61 AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKG 111 + + +LRR IS IKR + +GCYRG RH LP+RGQRT +NART + Sbjct: 61 NQQYFTGPELRRLISQDIKRFIRIGCYRGFRHNDALPLRGQRTHSNARTCRK 112 >UniRef50_Q2NFZ3 30S ribosomal protein S13P n=9 Tax=Euryarchaeota RepID=RS13_METST Length = 153 Score = 113 bits (284), Expect = 2e-24, Method: Composition-based stats. Identities = 33/141 (23%), Positives = 55/141 (39%), Gaps = 23/141 (16%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M RI ++ + ALT I G+GK + AI + +D +I + + + + + Sbjct: 9 MVRITRKDVDGNSTIATALTEIRGIGKAFAIAICKVLDLDQDAQIGYIDDESVKQIEAVL 68 Query: 61 AK-----------------------FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPV 97 ++E DL + + R+ + Y+G RH GLPV Sbjct: 69 ENPQEFGIPEWFLNRRNDYETGETKHLIESDLNMTLRDDLNRMKMIRSYKGKRHEVGLPV 128 Query: 98 RGQRTKTNARTRKGPRKPIKK 118 RGQRTK+ R + Sbjct: 129 RGQRTKSTFRHGSSVGVSRTR 149 >UniRef50_Q46GC7 30S ribosomal protein S13P n=9 Tax=Methanomicrobia RepID=RS13_METBF Length = 162 Score = 113 bits (283), Expect = 2e-24, Method: Composition-based stats. Identities = 35/140 (25%), Positives = 54/140 (38%), Gaps = 22/140 (15%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + RI ++ K ALT + G+G+ + I AG+ + L + ++ L + Sbjct: 23 LVRIMNTDLKGAKPVEYALTGLPGIGRRTAILIAKGAGVDPTATLGYLPDEEVAKLDRAI 82 Query: 61 ----------------------AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVR 98 K ++ D+ I L + YRGLRH RGL VR Sbjct: 83 GNFEGIVPSWMLNRQKDLATGQDKHLLGTDILLTFREDINNLKKVRAYRGLRHERGLKVR 142 Query: 99 GQRTKTNARTRKGPRKPIKK 118 GQRTK+ R +K Sbjct: 143 GQRTKSTGRRGSTVGVSRRK 162 >UniRef50_D1Z0V5 30S ribosomal protein S13P n=1 Tax=Methanocella paludicola SANAE RepID=D1Z0V5_METPS Length = 225 Score = 112 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 35/140 (25%), Positives = 54/140 (38%), Gaps = 22/140 (15%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + RI ++ + ALT I G+G SK + A + + + L Q+D LR+ + Sbjct: 71 LVRIQNTDLDGTSKVLYALTGIKGIGIRVSKMLARKAEVDPNAIMGYLPPEQVDRLRNAL 130 Query: 61 AK----------------------FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVR 98 + DL I + + Y+G+RH RG VR Sbjct: 131 ENIDTNMPVWMLNRRNDTYTGENRHLTGTDLILSNKEDINLMKKIRSYKGIRHERGQKVR 190 Query: 99 GQRTKTNARTRKGPRKPIKK 118 GQRT++ RT KK Sbjct: 191 GQRTRSTGRTGATVGVVRKK 210 >UniRef50_Q601J1 30S ribosomal protein S13 n=8 Tax=Bacteria RepID=RS13_MYCH2 Length = 137 Score = 111 bits (279), Expect = 6e-24, Method: Composition-based stats. Identities = 59/129 (45%), Positives = 83/129 (64%), Gaps = 13/129 (10%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAG-------------IAEDVKISE 47 MAR+ + IP+HK VIAL SI+G+GK+ + I+ + E+ K+ E Sbjct: 1 MARVLNVEIPNHKRIVIALCSIFGIGKSLATEIVEKTAKLQEEKFGKKFPILTENTKVKE 60 Query: 48 LSEGQIDTLRDEVAKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNAR 107 ++E + +RD + EGDL RE+ +IKRL+++ CYRG+RHR+GLPVRGQ T+ NAR Sbjct: 61 INEEVLQVIRDVAKTYKTEGDLHREVQSNIKRLIEIKCYRGIRHRKGLPVRGQVTQKNAR 120 Query: 108 TRKGPRKPI 116 TRKGPRK I Sbjct: 121 TRKGPRKTI 129 >UniRef50_B0BLG5 Ribosomal protein S13 n=3 Tax=Embryophyta RepID=B0BLG5_CYCTA Length = 150 Score = 111 bits (278), Expect = 8e-24, Method: Composition-based stats. Identities = 40/117 (34%), Positives = 67/117 (57%), Gaps = 1/117 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M+ I G ++ IA T I G+G ++ + GI++++K++E ++ QID + + Sbjct: 1 MSYIPGARSVPNEQVRIASTKIDGIGPKKATRVRYRLGISDNIKVNESTKYQIDQIEQII 60 Query: 61 AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 + VV +L+R I+R + + YRG+RH+ GLP+RGQRT TNART + Sbjct: 61 GQDHVVHWELKRGKRADIERSISISRYRGIRHQDGLPLRGQRTHTNARTCRKFGIVP 117 >UniRef50_Q8LPW2 Small ribosomal subunit protein S13, mitochondrial n=2 Tax=Glycine max RepID=RT13_SOYBN Length = 148 Score = 110 bits (276), Expect = 1e-23, Method: Composition-based stats. Identities = 40/106 (37%), Positives = 75/106 (70%), Gaps = 1/106 (0%) Query: 8 NIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKFVVEG 67 IPD+K V AL +++G+G+++++ I+A G+ E+ + +LS+ ++ ++R+ ++K+++ Sbjct: 38 EIPDNKRLVYALQNLHGIGRSKAQHIVAELGV-ENKFVKDLSKRELYSIRELLSKYLIGN 96 Query: 68 DLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPR 113 DL++ + + RL+ + CYRG+RH LP RGQRT TNARTR+ + Sbjct: 97 DLKKCVERDVGRLVGIQCYRGIRHVDSLPCRGQRTHTNARTRRSRK 142 >UniRef50_A0T0J8 30S ribosomal protein S13, chloroplastic n=2 Tax=Eukaryota RepID=RR13_PHATR Length = 123 Score = 110 bits (276), Expect = 1e-23, Method: Composition-based stats. Identities = 49/118 (41%), Positives = 77/118 (65%), Gaps = 2/118 (1%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M R+ G+++P +K ALT I+G+G T ++ I+ A I + + +L+ + LR + Sbjct: 1 MVRLVGVDLPRNKRIAYALTYIHGIGLTSARKIIEIANINPETRTVDLTTEETVALRQTL 60 Query: 61 AK--FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 + +EGDLRR ++IKRL ++ C+RG RHR LPVRGQRT+TNAR+R+G +K + Sbjct: 61 EESDLKLEGDLRRFNGLNIKRLNEINCHRGKRHRNNLPVRGQRTRTNARSRRGSKKTV 118 >UniRef50_Q2TUB5 Ribosomal protein S13 n=1 Tax=Dictyota dichotoma RepID=Q2TUB5_DICDH Length = 115 Score = 109 bits (274), Expect = 2e-23, Method: Composition-based stats. Identities = 41/115 (35%), Positives = 64/115 (55%), Gaps = 2/115 (1%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M+ I G + K + +L+ I+G+G RS+ + +GI D + ++ QI L + + Sbjct: 1 MSYIVGTSFSAEKSVLFSLSYIFGIGSYRSRILCNKSGIGLDCRFCDIDYDQIRILENLI 60 Query: 61 --AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPR 113 + F + L + I+R + CYRGLRH+RGLPVRGQRT TNA+ R + Sbjct: 61 EASSFRLGQSLEKYQIERIRRFYGIMCYRGLRHKRGLPVRGQRTHTNAKRRSTVK 115 >UniRef50_Q3S2A2 Ribosomal protein S13 n=1 Tax=Thalassiosira pseudonana RepID=Q3S2A2_THAPS Length = 115 Score = 109 bits (274), Expect = 2e-23, Method: Composition-based stats. Identities = 40/115 (34%), Positives = 66/115 (57%), Gaps = 2/115 (1%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M I +P+ K +LT ++G+GK +S I G++ + K+S+L+ Q L + Sbjct: 1 MVYILETELPEDKSIYFSLTKVFGIGKFQSLLICKRLGLSSNCKLSKLTSDQTIKLVKSI 60 Query: 61 A--KFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPR 113 V+ +LR+ ++ +K+L+ + Y+G+R RGLPVRGQRT TNA+T R Sbjct: 61 ENANLVINSNLRKSKTILLKKLIQIKTYKGIRRLRGLPVRGQRTHTNAKTASRTR 115 >UniRef50_Q0P3I6 Rps13 n=1 Tax=Ostreococcus tauri RepID=Q0P3I6_OSTTA Length = 116 Score = 109 bits (273), Expect = 3e-23, Method: Composition-based stats. Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 1/116 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M + + L IYG+ + I G+ V + LS Q + L + Sbjct: 1 MVFLFQKKLTPTNTIRKELKKIYGINSFLANQICDQLGLHTTVTVGALSLDQTEKLGRIL 60 Query: 61 AKF-VVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKP 115 + + E DL++++ + +R + +GCYRG R + LP+RGQRT TNA+T K + Sbjct: 61 QYYYLTEHDLKKQVQGNFQRFIQIGCYRGFRVTQRLPLRGQRTHTNAKTAKRILRA 116 >UniRef50_A5E736 Putative uncharacterized protein n=1 Tax=Lodderomyces elongisporus RepID=A5E736_LODEL Length = 122 Score = 109 bits (273), Expect = 3e-23, Method: Composition-based stats. Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 1/115 (0%) Query: 4 IAGINIPDHKHAVIALTS-IYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAK 62 I G I I L I+G+G + + A GI K+++L+E QI L E+++ Sbjct: 5 IFGKFIKGDFTVQIGLAKTIFGIGPKVASQLTARVGIYPRCKVNQLTEQQILELNKEISQ 64 Query: 63 FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIK 117 VEG L+++I+ I+ + G+RH +G PVRGQ+TKTN T + K + Sbjct: 65 LTVEGHLKQKINSDIQMKRAINSRAGIRHAQGFPVRGQKTKTNGATARRLNKIPR 119 >UniRef50_O27999 30S ribosomal protein S13P n=1 Tax=Archaeoglobus fulgidus RepID=RS13_ARCFU Length = 146 Score = 109 bits (272), Expect = 4e-23, Method: Composition-based stats. Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 22/140 (15%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + RIA ++ +K + ALT I G+G ++ I+ G+ K+ EL + I+ ++ V Sbjct: 6 IVRIADTDLDGNKSLMFALTGIKGIGLRAARCIVNELGVDGRAKLGELDDETIEKVKKFV 65 Query: 61 AK----------------------FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVR 98 + ++ D+ + I+RL+ + YRG+RH RG VR Sbjct: 66 EEEIESLPSWLLNRRKDPYSGQDLHLLSKDVDFARMLDIERLIKMKAYRGVRHARGKKVR 125 Query: 99 GQRTKTNARTRKGPRKPIKK 118 GQRT++ R + +K Sbjct: 126 GQRTRSTGRKGRTVGVVRRK 145 >UniRef50_B1L794 30S ribosomal protein n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L794_KORCO Length = 149 Score = 109 bits (272), Expect = 4e-23, Method: Composition-based stats. Identities = 37/141 (26%), Positives = 60/141 (42%), Gaps = 23/141 (16%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + R+ + K ++ALT + G+ T + IL AGI + + ELS+ + + D V Sbjct: 9 IVRLLNTTLDGTKPVIVALTGVRGISHTLALTILRKAGIHPNRLLGELSDEEYAKIEDVV 68 Query: 61 AK-----------------------FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPV 97 ++ D+ ++ I + +G ++G+RH GL V Sbjct: 69 NNPHKYGVPWWLMNRQKDYRNNESRILIGDDVNWYMTQDINLMKKIGSWKGIRHELGLKV 128 Query: 98 RGQRTKTNARTRKGPRKPIKK 118 RGQRTKT R K KK Sbjct: 129 RGQRTKTTGRVGKTVGYQRKK 149 >UniRef50_P08977 Ribosomal protein S13, mitochondrial n=165 Tax=Embryophyta RepID=RT13_MAIZE Length = 129 Score = 108 bits (271), Expect = 5e-23, Method: Composition-based stats. Identities = 42/112 (37%), Positives = 67/112 (59%), Gaps = 1/112 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M+ I+G + IA T + G+G ++ + GI+ ++KI EL++ QID + + Sbjct: 1 MSYISGARSLPDEQVRIASTKMDGIGPKKAIQLRYRLGISGNIKIHELTKYQIDQIEQMI 60 Query: 61 AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKG 111 A+ VV +L+R I+RL+ + YRG+RH+ G P+RGQRT TNART + Sbjct: 61 AQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTARK 112 >UniRef50_B2MWT5 Ribosomal protein S13 n=1 Tax=Hemiselmis andersenii RepID=B2MWT5_9CRYP Length = 113 Score = 108 bits (270), Expect = 7e-23, Method: Composition-based stats. Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 2/113 (1%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M I +N+ +K + +YG+G+ ++ I D + +L++ + L ++ Sbjct: 1 MVYILSVNLKSNKRVYFEVAKLYGIGRYQAIQFCNQLNIGFDCYVKDLNQAYLYALLKQI 60 Query: 61 A--KFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKG 111 +V+ L+ + I L+D+ YRG+RH LPVRGQRT+TNAR+RK Sbjct: 61 EHQNLIVDTMLQDQQKKIISELIDIKAYRGVRHIFRLPVRGQRTRTNARSRKR 113 >UniRef50_P54019 30S ribosomal protein S13P n=10 Tax=Euryarchaeota RepID=RS13_METJA Length = 150 Score = 107 bits (268), Expect = 9e-23, Method: Composition-based stats. Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 23/141 (16%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELS----------- 49 + R++ ++ +K ++AL IYGVG+ ++AI+ A + + L+ Sbjct: 9 LIRVSRTDLDGNKKLIMALQDIYGVGEAMARAIVRVAKLDPNKLAGYLTEEEVKKIEEVL 68 Query: 50 ---------EGQIDTLRDEV---AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPV 97 + +D V K V+E DL I RL + CYRG+RH GLP Sbjct: 69 ADPAKFGIPSWMFNRRKDYVTGEDKHVIESDLMIIKQEDINRLKRIRCYRGIRHELGLPC 128 Query: 98 RGQRTKTNARTRKGPRKPIKK 118 RGQRTK+ R +K Sbjct: 129 RGQRTKSTFRRGPTVGVSRRK 149 >UniRef50_C7NZ06 30S ribosomal protein n=3 Tax=Halobacteriaceae RepID=C7NZ06_HALMD Length = 178 Score = 107 bits (268), Expect = 9e-23, Method: Composition-based stats. Identities = 32/138 (23%), Positives = 56/138 (40%), Gaps = 22/138 (15%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 RI ++ K +LT + G+GK ++ I AG+ L + I+ + ++V Sbjct: 20 FVRIGQTDLDGTKSVERSLTDMNGIGKRAARIIAEKAGVDRQALFGALDDEDIEAVVEKV 79 Query: 61 A----------------------KFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVR 98 + DL+ + + R+ + Y+G+RH+RG VR Sbjct: 80 EGYADEVPEWLTNHQNDFYSGETTHEIGNDLQMQRRADVNRMQMIDSYKGVRHKRGQKVR 139 Query: 99 GQRTKTNARTRKGPRKPI 116 GQRTK+ RT + Sbjct: 140 GQRTKSTGRTEGTIGVNV 157 >UniRef50_Q9CA19 Small ribosomal subunit protein S13, mitochondrial n=4 Tax=rosids RepID=RT13_ARATH Length = 154 Score = 107 bits (268), Expect = 1e-22, Method: Composition-based stats. Identities = 45/115 (39%), Positives = 68/115 (59%), Gaps = 1/115 (0%) Query: 2 ARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVA 61 R+ +P++K L +YG+G+ +S +L GI + +L+ ++ LR+EV Sbjct: 32 IRVGNAEVPNNKPLKTGLQEVYGIGRRKSHQVLCHLGIT-NKLARDLTGKELIDLREEVG 90 Query: 62 KFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 + +LRR + I+RL+++ CYRG RHR GLP RGQRT TNART+KG I Sbjct: 91 QHQHGDELRRRVGSEIQRLVEVDCYRGSRHRHGLPCRGQRTSTNARTKKGKAVAI 145 >UniRef50_A2E0E1 Ribosomal protein S13p/S18e, putative n=3 Tax=Trichomonas vaginalis RepID=A2E0E1_TRIVA Length = 155 Score = 106 bits (265), Expect = 2e-22, Method: Composition-based stats. Identities = 34/141 (24%), Positives = 56/141 (39%), Gaps = 23/141 (16%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M R+ N+ + +ALT+I G+G+ + A++ AG+ + L+ + + + + Sbjct: 14 MVRMLSTNVDGRRPLYLALTNISGIGRRFAYAVVRRAGLDPLRRAGTLTPKEEELIVSII 73 Query: 61 -----------------------AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPV 97 V DL I I+R+ + RG+RH GL V Sbjct: 74 QNPTEHQIPVWMLNRRFDRATGQNTHWVATDLSANIRAEIERMKKMRMKRGIRHGLGLKV 133 Query: 98 RGQRTKTNARTRKGPRKPIKK 118 RGQ TK+ R KK Sbjct: 134 RGQCTKSTGRRGGALGVERKK 154 >UniRef50_P41094 40S ribosomal protein S18 n=266 Tax=Eukaryota RepID=RS18_DROME Length = 152 Score = 106 bits (265), Expect = 2e-22, Method: Composition-based stats. Identities = 37/141 (26%), Positives = 60/141 (42%), Gaps = 23/141 (16%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + RI NI + IA+T+I GVG+ S +L A + + E +E ++D + + Sbjct: 12 ILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTII 71 Query: 61 AK-----------------------FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPV 97 + + +L ++ ++RL + +RGLRH GL V Sbjct: 72 SNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 131 Query: 98 RGQRTKTNARTRKGPRKPIKK 118 RGQ TKT R + KK Sbjct: 132 RGQHTKTTGRRGRTVGVSKKK 152 >UniRef50_A0RY01 30S ribosomal protein S13P n=4 Tax=Thaumarchaeota RepID=RS13_CENSY Length = 227 Score = 106 bits (264), Expect = 3e-22, Method: Composition-based stats. Identities = 33/130 (25%), Positives = 55/130 (42%), Gaps = 23/130 (17%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + RI G ++P K AV+ L I G+G + AIL I + I L++ Q+ ++ + Sbjct: 54 IVRILGNDLPGEKKAVVGLRQIRGIGYGFATAILDVLKIDNNSNIGYLTDEQVASIEKLL 113 Query: 61 -----------------------AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPV 97 + + D+ + ++R G ++G RH GL V Sbjct: 114 QDPAGAGFPTWFLNRRKDLETGEDRHIFTSDIEFTVRNDVERERVSGSWKGYRHMFGLKV 173 Query: 98 RGQRTKTNAR 107 RGQRT+ R Sbjct: 174 RGQRTRNTGR 183 >UniRef50_Q18G53 30S ribosomal protein S13P n=8 Tax=Halobacteriaceae RepID=RS13_HALWD Length = 173 Score = 106 bits (264), Expect = 3e-22, Method: Composition-based stats. Identities = 34/138 (24%), Positives = 54/138 (39%), Gaps = 22/138 (15%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 RI ++ K +LT + G+GK ++ I A + L E +ID++ D V Sbjct: 21 FVRIGTTDLDGTKAVERSLTDMKGIGKRTARIITDVASVDRHATFGLLEEDEIDSITDAV 80 Query: 61 AK----------------------FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVR 98 DL + + R+ + Y+G+RH+RG VR Sbjct: 81 ENLDDHIPGWMTNRREDFFSGDTDHKTGADLEEKRRHDVNRMKMIDSYKGVRHKRGQKVR 140 Query: 99 GQRTKTNARTRKGPRKPI 116 GQRTK+ RT + Sbjct: 141 GQRTKSTGRTEGTIGVNV 158 >UniRef50_C1GA05 40S ribosomal protein S13 n=4 Tax=Onygenales RepID=C1GA05_PARBD Length = 157 Score = 105 bits (262), Expect = 5e-22, Method: Composition-based stats. Identities = 38/103 (36%), Positives = 59/103 (57%) Query: 16 VIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKFVVEGDLRREISM 75 + AL S +G+G ++A + E KI +L QI +L +++ +E DLRR+I Sbjct: 48 MKALQSFFGIGPLTCSKVMARFYVHETAKIGDLGNKQILSLTAALSEMKIENDLRRQILD 107 Query: 76 SIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIKK 118 I+RL D+G RG RH GLPVRGQRT++ +T + ++ Sbjct: 108 DIQRLKDIGTVRGRRHALGLPVRGQRTRSQNKTAIKLNRLDRR 150 >UniRef50_Q8SRP2 40S ribosomal protein S18 n=1 Tax=Encephalitozoon cuniculi RepID=RS18_ENCCU Length = 153 Score = 104 bits (260), Expect = 8e-22, Method: Composition-based stats. Identities = 37/141 (26%), Positives = 53/141 (37%), Gaps = 23/141 (16%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + RI NI K ALT I G+G + AI GI + E+ E ++ + D + Sbjct: 13 IVRIHNTNIDGTKRIPFALTKIRGIGIRIATAICKRLGIDLRKRAGEMGEDEMKRISDAI 72 Query: 61 -----------------------AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPV 97 ++ L ++ M I+R R R GL V Sbjct: 73 LDPASVGIPESYMNHQRDIIDGTTSHLIGTRLDADLRMMIERGKKNKRIRAYRLDVGLKV 132 Query: 98 RGQRTKTNARTRKGPRKPIKK 118 RGQRTK+N R + KK Sbjct: 133 RGQRTKSNGRRGRSMGVSRKK 153 >UniRef50_Q9HJD6 30S ribosomal protein S13P n=6 Tax=Euryarchaeota RepID=RS13_THEAC Length = 171 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 37/140 (26%), Positives = 60/140 (42%), Gaps = 22/140 (15%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + RIA ++ + +AL+ + G+G+ I + D KI EL E Q++ LR+ V Sbjct: 31 IVRIANKDLNGERLLPLALSDLKGIGERLGYVIAERLDLPIDKKIGELKEEQLEKLREYV 90 Query: 61 AK----------------------FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVR 98 +V DL ++ I + + Y+G+RH +G VR Sbjct: 91 EAKEYDLPEWLLNHRREPVTGKNLNLVSTDLEIQVQEDINLMKKIRSYKGIRHEKGKKVR 150 Query: 99 GQRTKTNARTRKGPRKPIKK 118 GQRT++N R KK Sbjct: 151 GQRTRSNGRKGLSIGVVRKK 170 >UniRef50_B6JWK5 Mitochondrial 37S ribosomal protein SWS2 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6JWK5_SCHJY Length = 142 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 34/94 (36%), Positives = 56/94 (59%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M + G+++PDHK ALTS YG+G+ ++AI A + +KI +L+E Q+ L + Sbjct: 1 MVFLLGVSLPDHKPVKYALTSFYGIGRITAEAICARLSFHDTLKIQDLTETQLTRLSQIL 60 Query: 61 AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRG 94 +E DL+R++ +I R + + Y+GLRH G Sbjct: 61 NGMTLESDLKRDVQKNIARYVQIRSYKGLRHSAG 94 >UniRef50_Q6UVP6 Ribosomal protein S13 n=1 Tax=Pseudendoclonium akinetum RepID=Q6UVP6_PSEAK Length = 119 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 1/114 (0%) Query: 4 IAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKF 63 + G N+ ++K A AL +IYGVG+ + A+ GI ++ EL+ Q++ L + Sbjct: 3 LLGSNVSENKAAFFALQAIYGVGQKSAAAVCNLVGINPQTRLRELNSTQLELLTKSCRRL 62 Query: 64 VVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIK 117 + +RE +IK L+ + CYRG RH LP RGQRT+TNA T K ++ Sbjct: 63 IASNK-KREKVEAIKSLIKISCYRGTRHMNALPCRGQRTRTNAYTSKNLLSKLR 115 >UniRef50_Q5MF08 Ribosomal protein S13 (Fragment) n=2 Tax=Magnoliophyta RepID=Q5MF08_9MAGN Length = 109 Score = 103 bits (258), Expect = 1e-21, Method: Composition-based stats. Identities = 37/107 (34%), Positives = 64/107 (59%), Gaps = 1/107 (0%) Query: 6 GINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAK-FV 64 G + + IA T + G+G ++ + GI+ ++K++EL++ QI+ + + + V Sbjct: 2 GARLVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIEKMEQMIGQDHV 61 Query: 65 VEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKG 111 V +L++ I+RL+ + YRG+RH+ G PVRGQRT TNART + Sbjct: 62 VHWELKKGERADIERLISISRYRGIRHKDGSPVRGQRTHTNARTFRK 108 >UniRef50_Q2TUF4 Ribosomal protein S13 n=11 Tax=Phaeophyceae RepID=Q2TUF4_9PHAE Length = 119 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 43/118 (36%), Positives = 64/118 (54%), Gaps = 2/118 (1%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M I G +IP+ K V ++ IYG+G ++SK + AG D + ++ + L + Sbjct: 1 MPFIIGTSIPEDKVLVQSVAHIYGIGLSQSKILCKKAGFGSDSRGRNVTFSKGKNLENLA 60 Query: 61 A--KFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 + DLRR + I+RL + YRG RHR+GLPVRGQRT TNA+ R + + Sbjct: 61 EAIPLPLGPDLRRFQNDKIRRLCLISTYRGSRHRKGLPVRGQRTHTNAKKRPLLKSNV 118 >UniRef50_C6UN26 30S ribosomal protein n=1 Tax=Candidatus Hodgkinia cicadicola Dsem RepID=C6UN26_HODCD Length = 118 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 45/104 (43%), Positives = 66/104 (63%), Gaps = 1/104 (0%) Query: 8 NIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVA-KFVVE 66 +P+HK +AL ++GVG + +L A + ++ ++L+ Q D + + + VVE Sbjct: 2 ELPEHKQVWVALQRVHGVGPHVATCVLRALAVPLRLRTAQLTRLQRDAITRVLEDELVVE 61 Query: 67 GDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 G LR ++ I +L +GCYRGLRHR GLPVRGQRT+TNA TRK Sbjct: 62 GGLRLKVRADINKLRRMGCYRGLRHRLGLPVRGQRTRTNAHTRK 105 >UniRef50_Q5K8M7 30s ribosomal protein s13, putative n=1 Tax=Filobasidiella neoformans RepID=Q5K8M7_CRYNE Length = 194 Score = 102 bits (254), Expect = 4e-21, Method: Composition-based stats. Identities = 41/164 (25%), Positives = 64/164 (39%), Gaps = 48/164 (29%) Query: 3 RIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAK 62 + G N+PDHK IAL + YG+ S +L GI + +++L+E Q+ L ++ Sbjct: 2 HLLGHNLPDHKPLKIALLTFYGISHALSARLLPRLGIHSEATVAQLTEPQVTALSAYLSS 61 Query: 63 ------------------------------------------------FVVEGDLRREIS 74 +E + RR + Sbjct: 62 PSTTARPSEQQIELAPPGGKVLKPVGHPAIFGELNKGKGKGQEDPLDDLKIETEKRRAMQ 121 Query: 75 MSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIKK 118 I L +G YRG RH G PV GQRT+TNA++ K + ++ Sbjct: 122 ADIAHLRMVGTYRGRRHAAGYPVHGQRTQTNAKSAKKHNRVERR 165 >UniRef50_B6HVE9 Pc22g19050 protein n=20 Tax=Leotiomyceta RepID=B6HVE9_PENCW Length = 114 Score = 101 bits (253), Expect = 6e-21, Method: Composition-based stats. Identities = 33/91 (36%), Positives = 52/91 (57%) Query: 14 HAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKFVVEGDLRREI 73 + + +G+G S +++ I ++ EL+ Q+ L +++ +E DLRRE+ Sbjct: 4 TVEMEYITFFGIGNNSSARLMSRFNIHPTCRVGELANKQVLDLTAVLSEMKIENDLRREV 63 Query: 74 SMSIKRLMDLGCYRGLRHRRGLPVRGQRTKT 104 IKR+ + G YRG RH GLPVRGQRT+T Sbjct: 64 LNDIKRMKETGTYRGRRHALGLPVRGQRTRT 94 >UniRef50_Q6LXN1 30S ribosomal protein S13P n=7 Tax=Methanococcus RepID=RS13_METMP Length = 149 Score = 101 bits (252), Expect = 7e-21, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 54/140 (38%), Gaps = 23/140 (16%) Query: 2 ARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVA 61 RI+ ++ AL + G+G+ ++A++ + + L++ + + + Sbjct: 10 IRISKTDLEGKNPLEYALQDMKGIGRAMARAVIRVTELDPKQQAGYLADEDVLKIESVLE 69 Query: 62 -----------------------KFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVR 98 K ++E DL + I + + CY+G+RH LP R Sbjct: 70 DPATHGIPSWMFNRKKDVYSGLDKHLIETDLVLTVQEDITNMKKIRCYKGIRHELRLPCR 129 Query: 99 GQRTKTNARTRKGPRKPIKK 118 GQRT+ + R KK Sbjct: 130 GQRTRGSFRKGTSMGVKRKK 149 >UniRef50_B3T3X1 Putative ribosomal protein S13/S18 n=1 Tax=uncultured marine microorganism HF4000_ANIW133F6 RepID=B3T3X1_9ZZZZ Length = 155 Score = 101 bits (252), Expect = 8e-21, Method: Composition-based stats. Identities = 34/140 (24%), Positives = 59/140 (42%), Gaps = 22/140 (15%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + R+A +I + LTSI GVG+ + + + A I L++ + D +R + Sbjct: 16 ILRLADSDIDGLRPIAQGLTSIGGVGQRTAIQLCSMADIDGTKLGGHLTDEEQDRIRSTI 75 Query: 61 AK----------------------FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVR 98 + ++ +++ + I RL + YRG+RHR G VR Sbjct: 76 DEYALNVPWWLVNRQRDLQSNEDAHIIGMEVKLTLKDDISRLASIKTYRGIRHRSGHKVR 135 Query: 99 GQRTKTNARTRKGPRKPIKK 118 GQR ++N R+ KK Sbjct: 136 GQRLRSNGRSGATLGVQKKK 155 >UniRef50_Q9G886 Ribosomal protein S13 n=1 Tax=Malawimonas jakobiformis RepID=Q9G886_9EUKA Length = 126 Score = 101 bits (252), Expect = 8e-21, Method: Composition-based stats. Identities = 54/120 (45%), Positives = 74/120 (61%), Gaps = 3/120 (2%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M + G I +K+ IALTSIYG+G + I + GI KI +++ Q+ T+R V Sbjct: 1 MLYLFGTYIKKNKNLRIALTSIYGLGYKNTCKICNSIGIGNKKKIDKITNTQLYTIRKIV 60 Query: 61 AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK--GPRKPIK 117 + + GDLRR IS++IKR +D+ YRGLRH+ PVRGQRT TNART+K K I+ Sbjct: 61 NNKYKISGDLRRIISINIKRYIDIKSYRGLRHKLSYPVRGQRTHTNARTQKLNNLNKNIR 120 >UniRef50_P62269 40S ribosomal protein S18 n=58 Tax=Coelomata RepID=RS18_HUMAN Length = 152 Score = 101 bits (252), Expect = 9e-21, Method: Composition-based stats. Identities = 36/141 (25%), Positives = 59/141 (41%), Gaps = 23/141 (16%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + R+ NI + A+T+I GVG+ + +L A I + EL+E +++ + + Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71 Query: 61 AK-----------------------FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPV 97 V+ L ++ ++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131 Query: 98 RGQRTKTNARTRKGPRKPIKK 118 RGQ TKT R + KK Sbjct: 132 RGQHTKTTGRRGRTVGVSKKK 152 >UniRef50_D1J904 30S ribosomal protein n=1 Tax=uncultured archaeon RepID=D1J904_9ARCH Length = 167 Score = 101 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 22/140 (15%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 RI ++ ++ +L + G+G+ ++ ++ +AGI K+ LS+ +++ L+ + Sbjct: 15 FVRILDTDLDGKRNVADSLCGVNGIGRRIAETLVRSAGIDSKGKMGNLSDDEVERLKTAI 74 Query: 61 A----------------------KFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVR 98 K ++ DL + I L + YRG+RH RGL VR Sbjct: 75 NSAEKRLPQWMFNRRKDINTGVDKHIMGTDLALKFRDDINLLRKIRSYRGIRHERGLKVR 134 Query: 99 GQRTKTNARTRKGPRKPIKK 118 GQRTK R KK Sbjct: 135 GQRTKATGRRGMVVGVIRKK 154 >UniRef50_Q05FK2 30S ribosomal protein S13 n=1 Tax=Candidatus Carsonella ruddii PV RepID=RS13_CARRP Length = 118 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 41/113 (36%), Positives = 64/113 (56%) Query: 4 IAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKF 63 I G+ I K+ V LT IYG+G + S I + ++ K +L+ + + + + K Sbjct: 5 ICGVLISKKKNIVFGLTKIYGIGYSMSLKICSKIENFKNKKFKDLTNEEKAKIENFINKI 64 Query: 64 VVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 VE +L+ I + K+ ++L Y+ LRH++ LP RGQRTKTNA+TRK I Sbjct: 65 NVENNLKTIIKENFKKKLNLNSYKSLRHKKKLPCRGQRTKTNAKTRKKMNHEI 117 >UniRef50_C4V7B3 Putative uncharacterized protein n=1 Tax=Nosema ceranae BRL01 RepID=C4V7B3_NOSCE Length = 161 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 29/133 (21%), Positives = 55/133 (41%), Gaps = 23/133 (17%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + RI N+ K V AL +I G+GK + AI G+ + +L++ +++ +++ + Sbjct: 21 IIRIFNTNVDGTKRVVHALCAITGIGKRMATAICKRTGVDVLRRAGDLNQDELEKIQNAI 80 Query: 61 -----------------------AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPV 97 +V + E M +++ + R R GL V Sbjct: 81 NDPSSVGIPYSFYNYKKNPVDGTNTHLVSTRMDAEYRMMLEKGKKIRHVRLCRVACGLKV 140 Query: 98 RGQRTKTNARTRK 110 GQR+K+N R + Sbjct: 141 HGQRSKSNGRHIR 153 >UniRef50_Q8W9S0 Ribosomal protein S13 n=1 Tax=Mesostigma viride RepID=Q8W9S0_MESVI Length = 116 Score = 98.3 bits (244), Expect = 7e-20, Method: Composition-based stats. Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 3/116 (2%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M K I L ++G+GK S I + G+ E + S+ +D+L++ + Sbjct: 1 MTFTLTSYASSSKPIPILLQKVFGLGKKNSIQICRSMGLHERMSPKMSSKFILDSLQERL 60 Query: 61 AKFV---VEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPR 113 + + L I ++ +RL+ + YRG RH RGLP RGQRT+TNART + + Sbjct: 61 ETSLGNSLGAPLINRIHLNKERLIKISSYRGFRHHRGLPARGQRTRTNARTCRKKK 116 >UniRef50_A4ZHE7 Ribosomal protein S13 n=4 Tax=Phytophthora RepID=A4ZHE7_PHYRM Length = 138 Score = 98.3 bits (244), Expect = 7e-20, Method: Composition-based stats. Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 1/119 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M I I D K + +LT +YG+ + +S I GI + +++L ++ L + + Sbjct: 1 MLYIFNKTISDSKSILYSLTILYGINEYQSNKICKNIGINPQITLNKLKNNHVNRLINYI 60 Query: 61 AKFV-VEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIKK 118 K + VE L++ + I L+++ RG+R +GLPVRGQRT TNA+T K ++ K Sbjct: 61 NKNLKVEQLLKKSKTERITELVEIKSNRGIRQSQGLPVRGQRTHTNAKTSKKLKQIFIK 119 >UniRef50_B7XLD6 SSU ribosomal protein S13P n=2 Tax=Enterocytozoon bieneusi H348 RepID=B7XLD6_ENTBH Length = 161 Score = 98.0 bits (243), Expect = 7e-20, Method: Composition-based stats. Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 23/131 (17%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + R+ NI K V ALT I G+G +KA + AG+ ELS +I ++++ + Sbjct: 21 IIRLYNTNIDGTKKIVFALTRIRGLGMRFAKAAVLRAGVDPSKFAGELSPEEIASIQNVI 80 Query: 61 -----------------------AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPV 97 + +V L ++ M I++ RG R GL Sbjct: 81 DEPLKYSIPEYFLNHQKDSVTGEDEHLVGIKLDGDLRMLIEKAKKFKEIRGCRLAMGLKC 140 Query: 98 RGQRTKTNART 108 GQRT++N R Sbjct: 141 NGQRTRSNGRN 151 >UniRef50_Q6E792 Ribosomal protein S13 n=1 Tax=Saprolegnia ferax RepID=Q6E792_SAPFE Length = 117 Score = 97.2 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 1/117 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M I I + + +LT +YG+ K +SK I GI I++L + Q++ L + + Sbjct: 1 MLYIFDKAISNSNSILYSLTILYGINKFQSKRICKNIGINPQTTINKLKKNQLNRLINYI 60 Query: 61 AKFV-VEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 K + +E L++ + L+++ RG+RH GLPVRGQRT TNA+T K + I Sbjct: 61 NKNIKIEQLLKKIKKDNFNNLLNIKTNRGIRHNLGLPVRGQRTHTNAKTSKKLKNTI 117 >UniRef50_D2JP71 Ribosomal protein S13 n=1 Tax=Synedra acus RepID=D2JP71_9STRA Length = 117 Score = 97.2 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 38/114 (33%), Positives = 63/114 (55%), Gaps = 3/114 (2%) Query: 3 RIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAK 62 I + D+K I LT IYG+G S I G+++++ ++S+ + +L + K Sbjct: 2 YILDTKLKDNKIMTIGLTEIYGIGSKISFKICKKLGLSKNITADQVSKNHLSSLDYILNK 61 Query: 63 ---FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPR 113 V +L++ S +++L+ + RGLR +GLPVRGQRT TNA+T K + Sbjct: 62 EYKLKVSNELKKIESFRLQKLISIKSSRGLRRVKGLPVRGQRTHTNAKTAKKHK 115 >UniRef50_A8NES7 Putative uncharacterized protein n=3 Tax=Agaricomycetes RepID=A8NES7_COPC7 Length = 182 Score = 97.2 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 41/181 (22%), Positives = 65/181 (35%), Gaps = 64/181 (35%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAI---------LAAAGIAE---------- 41 M I G+++PD+ A ALT YGVG+ + + ++ Sbjct: 1 MVHILGVHLPDNYLARYALTKFYGVGQKTAHRLCARFQIHDKCKVKDLSPFQVTSLASFL 60 Query: 42 ------------------------DVKISEL-----------SEGQIDTLR--------- 57 + +SEL ++ + Sbjct: 61 SSPATAPPLPRYPLASPDYVPPPPNTPVSELQAKFKEAQALIEAKKLAKIEQGVKLGPGY 120 Query: 58 -DEVAKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 D + K +E +LRREI +I+ +G Y G RH LPVRGQ T++NA T K + Sbjct: 121 VDPLKKLKIESELRREIRENIQHQRMIGSYVGRRHAMHLPVRGQNTQSNAATAKKLNRLD 180 Query: 117 K 117 + Sbjct: 181 R 181 >UniRef50_Q0DPA4 Os03g0704000 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q0DPA4_ORYSJ Length = 203 Score = 96.0 bits (238), Expect = 3e-19, Method: Composition-based stats. Identities = 35/86 (40%), Positives = 56/86 (65%), Gaps = 1/86 (1%) Query: 2 ARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVA 61 RI G+ IP+HK +L I+G+G++RS+ IL + +LSE ++ TLR EV Sbjct: 47 IRIGGVEIPNHKRVEYSLQYIHGIGRSRSRQILLDLNFD-NKVTKDLSEEEVITLRKEVT 105 Query: 62 KFVVEGDLRREISMSIKRLMDLGCYR 87 K+++EGDL+R ++I+RL ++ CYR Sbjct: 106 KYMIEGDLKRFNRVAIERLKEIRCYR 131 >UniRef50_A0SNY5 30S ribosomal protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=A0SNY5_9EURY Length = 177 Score = 95.6 bits (237), Expect = 4e-19, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 54/144 (37%), Gaps = 27/144 (18%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSK----AILAAAGIAEDVKISELSEGQIDTL 56 + RIA +I + AL + G+G+T S I I I L+E Q+ + Sbjct: 19 IVRIANKDINGGLNIQRALDQVKGIGQTMSHSLSYVIEHKFNIDPSTPIGSLNESQVTQV 78 Query: 57 RDEVAK-----------------------FVVEGDLRREISMSIKRLMDLGCYRGLRHRR 93 + + ++ DL + SI R + L +RG RH+ Sbjct: 79 EELIKDPHKYGVPKYLLNRRNDMDTGKDMHLIGNDLIFAVRQSINRDVTLRVWRGYRHQY 138 Query: 94 GLPVRGQRTKTNARTRKGPRKPIK 117 G VRGQ T++ RT K Sbjct: 139 GQKVRGQHTRSTGRTGATVGVTKK 162 >UniRef50_A8J3J1 Mitochondrial ribosomal protein S13 n=1 Tax=Chlamydomonas reinhardtii RepID=A8J3J1_CHLRE Length = 124 Score = 95.6 bits (237), Expect = 5e-19, Method: Composition-based stats. Identities = 33/114 (28%), Positives = 62/114 (54%), Gaps = 1/114 (0%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 MA+I + + H IAL ++G+GK+ S A+ A GI++D+K+ ++ + I + + Sbjct: 1 MAQIQRVALFPHATFHIALARVFGLGKSTSLAVSEACGISKDLKVKDVKDSYIQKVTAYI 60 Query: 61 A-KFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPR 113 FV L+R++ ++ + + RG+RH GLPV +T++N + R Sbjct: 61 EANFVTGDTLKRQVRENVLEEVAINSRRGVRHTLGLPVSSAQTRSNGVNARKLR 114 >UniRef50_A1RWT9 30S ribosomal protein S13P n=17 Tax=Archaea RepID=RS13_THEPD Length = 157 Score = 92.9 bits (230), Expect = 2e-18, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 23/122 (18%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + R+AG+++P K V AL I G+G + ++A+ G+ + LSE +++ L + Sbjct: 8 IVRVAGVDLPGDKALVYALADIKGIGVSTAQAVAKKLGLDPYRLLGTLSEEEVEKLSAAL 67 Query: 61 -----------------------AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPV 97 + ++ DL + I+ + + Y+G+RH GL V Sbjct: 68 REIEKLGLPPWMLNRRKDPFLGVDRHLITSDLLITVRNDIEFMKKIKSYKGVRHMLGLKV 127 Query: 98 RG 99 RG Sbjct: 128 RG 129 >UniRef50_A8BZ58 Ribosomal protein S18 n=2 Tax=Giardia intestinalis RepID=A8BZ58_GIALA Length = 154 Score = 89.9 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 32/141 (22%), Positives = 48/141 (34%), Gaps = 23/141 (16%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + R+ NI AL I G+G+ + L A I + EL+ + D L + Sbjct: 13 LLRMFNTNIQGKVVLECALVGIKGIGRRFANVALKKANIDVHKRAGELTAAEEDALMKVL 72 Query: 61 AK-----------------------FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPV 97 ++ + ++RL C RG+RH L V Sbjct: 73 EDPLSHGIPAWMLNRNNDFESGKDMHILVNTIASTHRADLERLRKTRCERGVRHHHNLKV 132 Query: 98 RGQRTKTNARTRKGPRKPIKK 118 RGQ TK+ R KK Sbjct: 133 RGQHTKSTGRRGHVVGVQRKK 153 >UniRef50_Q09F78 Ribosomal protein S13 n=5 Tax=Tetrahymena RepID=Q09F78_TETPR Length = 276 Score = 89.5 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 1/116 (0%) Query: 4 IAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKF 63 I G + IYG K + + + + ++ F Sbjct: 7 INGYLFNKDTNLYKTYGKIYGWKYLTYKLMFDRFESFYSSNPISYKDAEWKKFKSILSNF 66 Query: 64 VVEGD-LRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIKK 118 + + +++I L + YRGLRH +GLPVRGQRT TNA + ++K Sbjct: 67 APKNRTFKDRFNINIFFLDFMNTYRGLRHSKGLPVRGQRTWTNAWSVYRSNLFLRK 122 >UniRef50_B8D6G1 30S ribosomal protein n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D6G1_DESK1 Length = 174 Score = 87.2 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 25/122 (20%), Positives = 48/122 (39%), Gaps = 23/122 (18%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + R+ ++ V L+ + G+G T S AI G+ + ++ LS+ + ++ + V Sbjct: 22 IVRMLETDVDGELPLVYGLSEVKGLGYTFSLAICRILGLNPEQRVGFLSDDVVKSIEEVV 81 Query: 61 AK-----------------------FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPV 97 + +L + I+R + +RG+RH GL V Sbjct: 82 RNPGKYGIPSWIYNRQKDYTTGQNLHLTGANLVYYVKEDIEREKRVKSWRGIRHALGLKV 141 Query: 98 RG 99 RG Sbjct: 142 RG 143 >UniRef50_D2EFK4 30S ribosomal protein n=2 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EFK4_9EURY Length = 179 Score = 86.0 bits (212), Expect = 3e-16, Method: Composition-based stats. Identities = 30/134 (22%), Positives = 58/134 (43%), Gaps = 23/134 (17%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + RIA ++ K L SI G+G + S A++ I E K+ +L E Q++ L++ + Sbjct: 26 IVRIADTDLDGSKKVKDLLRSITGIGFSYSNALMKVLKIPEGEKLQDLDEKQLNELKEAL 85 Query: 61 AK-----------------------FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPV 97 + ++ +LR + +M I+++ Y+G RH + Sbjct: 86 SNPFKYKLPHWLFNWRRDETTGLDYHLLSNELRSKTTMQIQKIKTSRSYKGYRHSFSYKL 145 Query: 98 RGQRTKTNARTRKG 111 RGQ+ ++ G Sbjct: 146 RGQKVRSRGANVHG 159 >UniRef50_B5SQ48 Ribosomal protein S13 n=2 Tax=unclassified Blastocystis RepID=B5SQ48_9STRA Length = 116 Score = 86.0 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 1/101 (0%) Query: 14 HAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKF-VVEGDLRRE 72 + L IYG+ ++K IL + G +KI L+ + + + K+ ++ DL + Sbjct: 14 SLLFILNKIYGINTMQAKYILHSLGYNPSMKIKNLTPTNLKSFNMFLTKYYLINNDLHYQ 73 Query: 73 ISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPR 113 + K+ + L Y G+R + LP GQ T +NA T K Sbjct: 74 FENNKKQKILLNTYHGVRLKTKLPSHGQNTHSNAHTAKKLN 114 >UniRef50_A0EBZ1 Chromosome undetermined scaffold_89, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0EBZ1_PARTE Length = 193 Score = 81.4 bits (200), Expect = 9e-15, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 41/112 (36%), Gaps = 16/112 (14%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + RI N+ + + SI G+G+ + I + + EL++ + + + + Sbjct: 14 IIRILNTNVDGKQQMAYEIRSIKGIGRRFAIQICKVLRLNLTKRAGELTDEEAHKITEVI 73 Query: 61 --------------AKFVVEGDLRREISMSIKRLMDLG--CYRGLRHRRGLP 96 V +L ++ ++R+ + + LRH GL Sbjct: 74 KMVPQYIRDLKNGKNYEVTTNELETKLREDLERIKKIKYSQWLCLRHHWGLR 125 >UniRef50_Q3LW54 Ribosomal protein S18 n=1 Tax=Bigelowiella natans RepID=Q3LW54_BIGNA Length = 159 Score = 81.4 bits (200), Expect = 9e-15, Method: Composition-based stats. Identities = 33/141 (23%), Positives = 49/141 (34%), Gaps = 23/141 (16%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 RI NI L +I GVG S + + K+ + + ++ + + Sbjct: 18 FIRIFDCNINGSLSCNFGLRNIKGVGIRMSNVLRKILKKDINYKLYNIEKADLEEVVNIF 77 Query: 61 AK-----------------------FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPV 97 K V+ L + IKRL+ + +GLRH L Sbjct: 78 GKSSRKAFPSWLMNRRADFLTGDNLHVLSTVLDSALQEDIKRLVTIKNNKGLRHLSRLKT 137 Query: 98 RGQRTKTNARTRKGPRKPIKK 118 RGQ TK+N R K KK Sbjct: 138 RGQHTKSNGRRGKTIGVVRKK 158 >UniRef50_Q9G8U6 Ribosomal protein S13 n=1 Tax=Rhodomonas salina RepID=Q9G8U6_RHDSA Length = 102 Score = 79.1 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 2/95 (2%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 M RI + K +AL SI+G+G + + + I + K+ LS+GQ+ + ++ Sbjct: 1 MVRIFEKFLNRKKLVFVALRSIFGLGSFQIRLLCNKCDIGSNCKVEHLSQGQVINICKKI 60 Query: 61 --AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRR 93 K VE L+ + IKRL+ + C+RG H++ Sbjct: 61 DQNKLFVESQLKSIVKFDIKRLIMVNCFRGFFHKK 95 >UniRef50_Q9G4D3 Ribosomal protein S13 n=1 Tax=Thraustochytrium aureum RepID=Q9G4D3_9STRA Length = 120 Score = 76.0 bits (186), Expect = 4e-13, Method: Composition-based stats. Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 5/113 (4%) Query: 7 INIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKFV-- 64 + +K L +G + K I G++ IS SE Q++ L + K Sbjct: 6 KSFKKNKTLFNVLRDTKSIGPIKIKYIAKITGLSLKTPISLFSESQLEHLSIWIEKNFTG 65 Query: 65 ---VEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRK 114 + + + S K+++ R LR ++GLPVRGQRTKTNA+T K K Sbjct: 66 SNCIHTEFLQIKSEEKKKIIASKSLRSLRFKKGLPVRGQRTKTNAKTAKRLNK 118 >UniRef50_Q9G904 Ribosomal protein S13 n=1 Tax=Ochromonas danica RepID=Q9G904_OCHDN Length = 125 Score = 74.1 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 32/101 (31%), Positives = 49/101 (48%) Query: 15 AVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKFVVEGDLRREIS 74 + +IYG+ K ++K + G LS + + L +A F + L+ Sbjct: 1 MKKSTNNIYGIKKIKNKFVERQLGYNIFSHKHALSIYKDELLNTFLAGFKQDRVLKEFDK 60 Query: 75 MSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKP 115 +I L++ YRG RH++ LPVRGQRT TNA+T K Sbjct: 61 KNIDFLINNKSYRGSRHKKHLPVRGQRTHTNAKTIKKKSNA 101 >UniRef50_C0PQ42 Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=C0PQ42_PICSI Length = 89 Score = 72.1 bits (176), Expect = 4e-12, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 41/118 (34%), Gaps = 40/118 (33%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 + R+ N+ + + ALTSI G+G+ + + A + + + Sbjct: 12 ILRVLNTNVDGRQKIMFALTSIKGIGRRLANLVCKKADVDMNKR---------------- 55 Query: 61 AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIKK 118 +RGLRH GL VRGQ TKT R K K+ Sbjct: 56 ------------------------NHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 89 >UniRef50_B3H631 Uncharacterized protein At5g14320.2 n=1 Tax=Arabidopsis thaliana RepID=B3H631_ARATH Length = 128 Score = 71.0 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 27/79 (34%), Positives = 49/79 (62%), Gaps = 1/79 (1%) Query: 2 ARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVA 61 AR+ G+ IP +K +L I+G+G+TR++ IL + E+ +++E ++ LRDEV+ Sbjct: 48 ARVGGVEIPANKRIEYSLQYIHGIGRTRARQILVDLQM-ENKITKDMAEEELIILRDEVS 106 Query: 62 KFVVEGDLRREISMSIKRL 80 K+++EGDL + + L Sbjct: 107 KYMIEGDLVIHFPLHLHTL 125 >UniRef50_Q8H583 Ribosomal protein S18-like n=2 Tax=Eukaryota RepID=Q8H583_ORYSJ Length = 145 Score = 70.2 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 33/69 (47%) Query: 50 EGQIDTLRDEVAKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTR 109 + Q +D VV L ++ ++RL + +RGLRH GL VRGQ TKT R Sbjct: 77 QQQKKDYKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRG 136 Query: 110 KGPRKPIKK 118 K K+ Sbjct: 137 KTVGVSKKR 145 >UniRef50_B7P1K9 40S ribosomal protein S18, putative (Fragment) n=1 Tax=Ixodes scapularis RepID=B7P1K9_IXOSC Length = 150 Score = 69.4 bits (169), Expect = 3e-11, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 28/55 (50%) Query: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDT 55 + R+ NI + + ALT+I GVG+ S + A + + + EL+E + + Sbjct: 12 ILRVLNTNIDGRRKVMFALTAIKGVGRRFSNMVCKKADVDLNKRAGELTEEEATS 66 >UniRef50_Q9G8P6 Ribosomal protein S13 n=1 Tax=Naegleria gruberi RepID=Q9G8P6_NAEGR Length = 163 Score = 68.3 bits (166), Expect = 7e-11, Method: Composition-based stats. Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 12/100 (12%) Query: 23 YGVGKTRSKAILAAAGIAEDVKISELSEGQIDT------LRDEVAKFVVEGD------LR 70 +G+G + +K++ +G+ +++I + ++ + + F + L Sbjct: 37 FGIGVSIAKSLCYFSGLHPNLRIHLFLDNYFNSFYSNFYILKRIKYFFLTNKNNLDHFLH 96 Query: 71 REISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 +E+ I L + C +G RH LPVRGQR +TNARTRK Sbjct: 97 KEMISCINVLKTIRCLKGKRHSTFLPVRGQRNRTNARTRK 136 >UniRef50_P46760 Ribosomal protein S13, mitochondrial n=1 Tax=Acanthamoeba castellanii RepID=RT13_ACACA Length = 119 Score = 67.9 bits (165), Expect = 9e-11, Method: Composition-based stats. Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 5/109 (4%) Query: 10 PDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKFVVEGDL 69 +K+ AL I+GV + + G+ + K+S ++ ++ + F Sbjct: 14 NKNKNIFSALKDIHGVNLKKINKMGLVMGLDKFEKVSSMNFELFSLIKKQAIFFY--NLE 71 Query: 70 RREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIKK 118 +I ++ + + Y G+RH LPVRGQRT TNA+T P K IKK Sbjct: 72 ENKIFNNVNKKKKIKNYTGMRHILKLPVRGQRTHTNAKT---PSKNIKK 117 >UniRef50_Q8M0B4 Ribosomal protein S13 n=1 Tax=Amoebidium parasiticum RepID=Q8M0B4_AMOPA Length = 130 Score = 67.1 bits (163), Expect = 2e-10, Method: Composition-based stats. Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 13/107 (12%) Query: 20 TSIYGVGKTRSKAILAAAGIAED--VKISELSEGQIDTLRDEVAKFV-----------VE 66 +YG+G+ I G++ + ++ QIDT KF +E Sbjct: 24 KKVYGIGEKEYATISVQLGLSSNQGRGVTSYERSQIDTYIKRRMKFTMLITPDFHTKPIE 83 Query: 67 GDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPR 113 +LR ++ I L ++ Y+G+RH++GLPV GQRTKTNA + + R Sbjct: 84 QNLRAAMNAKILTLQNIKTYKGIRHKKGLPVNGQRTKTNAISARRKR 130 >UniRef50_A6RYD3 Putative uncharacterized protein n=1 Tax=Botryotinia fuckeliana B05.10 RepID=A6RYD3_BOTFB Length = 82 Score = 66.4 bits (161), Expect = 3e-10, Method: Composition-based stats. Identities = 22/52 (42%), Positives = 32/52 (61%) Query: 63 FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRK 114 +E +L+R + +I+R+ +G YRG RH GLPVRGQ TK+ T + K Sbjct: 1 MPLETELKRRLQDNIERMRTMGSYRGRRHAMGLPVRGQNTKSQISTARKLNK 52 >UniRef50_Q8HIT6 Ribosomal protein S13 n=1 Tax=Monosiga brevicollis RepID=Q8HIT6_MONBE Length = 166 Score = 64.8 bits (157), Expect = 8e-10, Method: Composition-based stats. Identities = 36/165 (21%), Positives = 55/165 (33%), Gaps = 50/165 (30%) Query: 4 IAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKF 63 + + L I G+GK + I GI +++ S+LSE ID L +A Sbjct: 1 MYETRFKKNLSLYRNLLKIKGLGKFKIFNICQILGINPNIEYSKLSEHYIDELNLLLANI 60 Query: 64 --------------------------------------------------VVEGDLRREI 73 ++E +L Sbjct: 61 KKQDYNSILENVNIDNTNTRINNKNIDKNKLNLYLFNKNSTFNKSTKNIVLIEENLNDYE 120 Query: 74 SMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIKK 118 S I L+ + RG R + G P +GQRT++NA T K K + K Sbjct: 121 SSQINTLIQINALRGRRIKMGYPSKGQRTRSNAITAKRINKRLIK 165 >UniRef50_B9GT74 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9GT74_POPTR Length = 126 Score = 56.0 bits (134), Expect = 4e-07, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 31/102 (30%), Gaps = 32/102 (31%) Query: 16 VIALTSIYGVGKTRSKAILAAAGIAEDVKISE---------LSEGQIDTLRDEVAK---- 62 + ALTSI G+G+ + + A + + + ++ Q L VA Sbjct: 1 MFALTSIKGIGRRFANIVCKKADVDMNKRSHSPSLSVLFWLVNYPQQSNLMTIVANPCQF 60 Query: 63 -------------------FVVEGDLRREISMSIKRLMDLGC 85 VV L ++ ++ L + Sbjct: 61 KIPDWFLNRQKDYTDGKYSQVVSNALDMKLRDDLECLKKIRQ 102 >UniRef50_P15609 Uncharacterized mitochondrial protein ORF8 n=2 Tax=Paramecium RepID=YM08_PARTE Length = 241 Score = 54.8 bits (131), Expect = 8e-07, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 23/47 (48%) Query: 71 REISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIK 117 + +I + YR RH +GLP RGQRT +NA + ++ Sbjct: 75 DRQAANIVTANIIWSYRSWRHFKGLPCRGQRTWSNASSCYRSNLILR 121 >UniRef50_C0S1M2 40S ribosomal protein S13 n=1 Tax=Paracoccidioides brasiliensis Pb03 RepID=C0S1M2_PARBP Length = 105 Score = 53.7 bits (128), Expect = 2e-06, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 31/56 (55%) Query: 34 LAAAGIAEDVKISELSEGQIDTLRDEVAKFVVEGDLRREISMSIKRLMDLGCYRGL 89 +A + E KI +L QI +L +++ +E DLRR+I I+RL D+G R Sbjct: 1 MARFYVHETAKIGDLGNKQILSLTAALSEMKIENDLRRQILDDIQRLKDIGTVRAC 56 >UniRef50_Q4V607 IP07925p (Fragment) n=10 Tax=Sophophora RepID=Q4V607_DROME Length = 246 Score = 45.6 bits (107), Expect = 5e-04, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 20/41 (48%) Query: 22 IYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAK 62 I GVG+ S +L A + + E +E ++D + ++ Sbjct: 1 IKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISN 41 >UniRef50_B2XX55 Ribosomal protein S13 n=1 Tax=Polysphondylium pallidum RepID=B2XX55_POLPA Length = 144 Score = 44.8 bits (105), Expect = 9e-04, Method: Composition-based stats. Identities = 26/115 (22%), Positives = 44/115 (38%), Gaps = 5/115 (4%) Query: 1 MARIAG-INIPDHKHAVIALTS-IYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRD 58 M I I + + K V + I G+ T + + + G+ + +LS L Sbjct: 1 MVIILDQIILNEKKKIVNEIKKEIPGLSYTLATKLCSLCGLLPSITGIKLSTNLNLKLMR 60 Query: 59 EVAKFVVEGDLRREI-SMSIKRLM-DLGCYRGLRHRRGLPVRGQRTKTNARTRKG 111 + D + YR LR+++G PV QRT++NA+T Sbjct: 61 LFQTYKGLYDFNFFNYKKMFNNMRNKDQAYRNLRYKKGYPVN-QRTRSNAKTAAK 114 >UniRef50_A4BF40 30S ribosomal protein S13 (Fragment) n=4 Tax=cellular organisms RepID=A4BF40_9GAMM Length = 35 Score = 43.3 bits (101), Expect = 0.002, Method: Composition-based stats. Identities = 27/33 (81%), Positives = 30/33 (90%) Query: 86 YRGLRHRRGLPVRGQRTKTNARTRKGPRKPIKK 118 YRG+RHRR LPVRGQ TK NARTRKGP+KPIK+ Sbjct: 3 YRGIRHRRNLPVRGQNTKNNARTRKGPKKPIKR 35 >UniRef50_Q9MGA5 Ribosomal protein S13 n=1 Tax=Chrysodidymus synuroideus RepID=Q9MGA5_9STRA Length = 112 Score = 43.3 bits (101), Expect = 0.003, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 4/95 (4%) Query: 23 YGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKFVVEGDLRREISMSIKRLMD 82 Y + K + G+ + L+ + K + Sbjct: 11 YKIKFVSKKIVFNKLGLNLKKNRFNIKTNHQKNLQFFLVKLKTSNYTNKTQ----NFFYK 66 Query: 83 LGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIK 117 + Y+ R+ G P+RGQRT TNA+T+K + K Sbjct: 67 IKNYKNFRNLLGYPIRGQRTHTNAKTKKKFKFSPK 101 >UniRef50_Q2LCP2 Ribosomal protein S13, mitochondrial n=2 Tax=Dictyostelium RepID=RT13_DICCI Length = 170 Score = 39.8 bits (92), Expect = 0.026, Method: Composition-based stats. Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 8/113 (7%) Query: 4 IAGINIPDHKHAVIALTS-IYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAK 62 I I + K + L I G+ ++ ++ +G +K + L + Q + + + Sbjct: 5 IGKIELNSEKQIIGELKKKIKGINLNVAQKVIMLSGNVASLKGNTLLKSQEKQILEILQS 64 Query: 63 FVVEGD----LRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKG 111 F D L+ E I+RL ++ YR +R +G P++G RTK+NA T K Sbjct: 65 FKGLYDYTYGLKVEALDKIRRLENV--YRYIRVIKGYPIKG-RTKSNANTAKR 114 >UniRef50_B9GT75 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9GT75_POPTR Length = 85 Score = 39.4 bits (91), Expect = 0.035, Method: Composition-based stats. Identities = 12/19 (63%), Positives = 13/19 (68%) Query: 84 GCYRGLRHRRGLPVRGQRT 102 +RGLRH GL VRGQ T Sbjct: 52 WNHRGLRHYWGLIVRGQHT 70 >UniRef50_B2XXA3 Ribosomal protein S13 n=2 Tax=Dictyosteliida RepID=B2XXA3_9MYCE Length = 166 Score = 39.0 bits (90), Expect = 0.049, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 43/113 (38%), Gaps = 6/113 (5%) Query: 9 IPDHKHAVIALTS-IYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKFVVEG 67 + K + + I G+G++ +K + + G +S++S L F Sbjct: 11 LNKRKKVLFEIKKKIAGMGESMTKRLCSMCGFLPMTYVSKISTKGGLRLMRIYKSFKGLS 70 Query: 68 DLRREI---SMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIK 117 D + + +R + YR R +G PV QRT+TN + + Sbjct: 71 DYSYYVYRKRFNQRRSKE-RAYRSQRFTKGYPV-SQRTRTNGKIASKKLDIKR 121 >UniRef50_C3NHT6 Type 2 DNA topoisomerase 6 subunit B n=14 Tax=Thermoprotei RepID=TOP6B_SULIN Length = 530 Score = 38.6 bits (89), Expect = 0.068, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Query: 2 ARIAGINIPDHKHAV-IALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 +I N+ + +G T + IL AG+ + K+ L+E +I L + Sbjct: 241 IKILINNLKRDYTIKEFLVNEFQSIGDTTADKILELAGLKPNKKVKNLTEEEITRLVETF 300 Query: 61 AKF 63 K+ Sbjct: 301 KKY 303 >UniRef50_A9RXP3 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RXP3_PHYPA Length = 52 Score = 38.2 bits (88), Expect = 0.080, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 26/52 (50%) Query: 3 RIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQID 54 I N+ +++ IAL +G+ + I G+ +++K ++L + QI Sbjct: 1 YILRTNLVPNEYVEIALIQNFGLSPKKIIQIYDQLGLNDNIKFNKLIKYQIK 52 >UniRef50_A4YHK7 Type 2 DNA topoisomerase 6 subunit B n=3 Tax=Thermoprotei RepID=TOP6B_METS5 Length = 531 Score = 38.2 bits (88), Expect = 0.089, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 24/48 (50%) Query: 16 VIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKF 63 + VG+ + +++ AG+ D ++ +L++ Q+ L D + F Sbjct: 256 EFLVKEFQSVGEKTALSVIEMAGLDPDKRVQKLTDDQLSKLVDAMKNF 303 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.315 0.160 0.460 Lambda K H 0.267 0.0493 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 733,164,259 Number of Sequences: 3077464 Number of extensions: 27192364 Number of successful extensions: 104167 Number of sequences better than 1.0e-01: 125 Number of HSP's better than 0.1 without gapping: 316 Number of HSP's successfully gapped in prelim test: 29 Number of HSP's that attempted gapping in prelim test: 103598 Number of HSP's gapped (non-prelim): 358 length of query: 118 length of database: 1,040,396,356 effective HSP length: 85 effective length of query: 33 effective length of database: 778,811,916 effective search space: 25700793228 effective search space used: 25700793228 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 88 (38.2 bits)