Phyre 2 alignment of P0AG16 with d2gp4a1

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Job Description | P0AG16
Confidence | 26.12% | Date | Thu Jan 5 11:27:50 GMT 2012
Rank | 435 | Aligned Residues | 31
% Identity | 3% | Template | d2gp4a1
SCOP info | The "swivelling" beta/beta/alpha domain | LeuD/IlvD-like | IlvD/EDD C-terminal domain-like
Resolution | 2.49

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 204 | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | E | Y | M | V | A | S | E | S | V | A | L | D | T | L | G | F | D | F | L | R | D | V | A | P | G | E | A | I | Y | I | T | E | E | G
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | A | V | V | I | D | D | Q | N | K | L | D | A | L | F | K | S | G | . | . | . | A | L | D | R | D | C | V | V | V | V | K | G | Q | G
Template Known Secondary structure |  |  |  |  |  | S | S | G | G | G |  |  |  |  |  |  | T | T | . | . | . | T | T | S | S | S |  |  |  |  |  |  | S |  | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 448 | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . |  |  |  | . | . | . | . | . | 470 | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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