Phyre 2 alignment of P0AG16 with d1qpga_

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Job Description | P0AG16
Confidence | 25.60% | Date | Thu Jan 5 11:27:50 GMT 2012
Rank | 443 | Aligned Residues | 46
% Identity | 26% | Template | d1qpga_
SCOP info | Phosphoglycerate kinase | Phosphoglycerate kinase | Phosphoglycerate kinase
Resolution | 2.40

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . |  |  |  |  |  |  |  | . | . | . |  | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . |  |  |  | . | . | . | . | . | 390 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | K | L | N | A | N | R | A | E | F | R | D | K | N | V | L | L | . | . | . | . | . | . | . | V | D | D | . | S | I | V | R | G | T | T | S | E | Q | I | I | E | M | A | R | . | . | . | E | A | G | A | K | K | V | Y | L | A | S
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | K | L | S | V | Q | D | L | D | L | K | D | K | R | V | F | I | R | V | D | F | N | V | P | L | D | G | K | K | I | T | S | N | Q | R | I | V | A | A | L | P | T | I | K | Y | V | L | E | H | H | P | R | Y | V | V | L | A | S
Template Known Secondary structure |  | B |  | B | G | G | G |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  | B | S | S | S | S | B | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  | S |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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