Phyre 2 alignment of P0AG16 with d1vk9a_

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Job Description | P0AG16
Confidence | 49.26% | Date | Thu Jan 5 11:27:50 GMT 2012
Rank | 225 | Aligned Residues | 37
% Identity | 14% | Template | d1vk9a_
SCOP info | Cytidine deaminase-like | Cytidine deaminase-like | Hypothetical protein TM1506
Resolution | 2.70

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 151 | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | D | N | I | F | A | A | I | A | A | T | N | R | L | I | R | G | A | Y | A | C | V | A | M | I | I | G | H | G | M | V | A | F | R | D | P | N | G | I | R | P | L
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |
Template Sequence |  | K | N | L | L | R | S | A | L | K | I | F | E | K | . | . | K | D | L | S | L | L | A | Y | . | S | G | R | S | I | F | . | E | S | K | D | S | G | L | K | P | V
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | T | T |  | S |  |  |  |  | . | S | S | S |  |  |  | . |  |  |  |  | S | T | T |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 3 | . | . | . | . | . | . | 10 | . | . | . | . | . |  |  | . | . | . | . | 20 | . | . | . |  | . | . | . | . | . | . |  | 30 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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