Phyre 2 alignment of P0AG16 with c2o2tB_

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Job Description | P0AG16
Confidence | 53.28% | Date | Thu Jan 5 11:27:50 GMT 2012
Rank | 211 | Aligned Residues | 47
% Identity | 21% | Template | c2o2tB_
PDB info | PDB header:structural protein | Chain: B: PDB Molecule:multiple pdz domain protein; | PDBTitle: the crystal structure of the 1st pdz domain of mpdz
Resolution | 2.70 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 359 | 360 | . | . | . | . | . | . | . | . | . | 370 | . |  | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | R | D | K | N | V | L | L | V | D | D | S | I | V | . | R | G | T | T | S | E | Q | I | I | E | M | A | R | E | A | G | A | K | K | V | Y | L | A | S | A | A | P | E | I | R | F | P | N | V | Y | G | I
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |
Template Sequence |  | E | T | D | Q | I | L | A | I | N | G | Q | A | L | D | Q | T | I | T | H | Q | Q | A | I | S | I | L | Q | K | A | K | D | T | . | V | Q | L | V | I | A | R | G | S | L | . | . | P | Q | Y | Y | K | V
Template Known Secondary structure |  | T | T |  |  |  |  |  |  | T | T |  |  |  |  | T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  | S |  | . |  |  |  |  |  |  | S | S |  |  | . | . | G | G | G | G |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 184 | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . |  | . | . | . | . | 220 | . | . | . | . | . |  |  | . | . | . | . | 230 | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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