34 d3prna_ Probab=82.50   E-value=3  Score=19.79  Aligned_columns=164  Identities=13%

Q ss_pred             CCCCEEEEEEEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEEEEEEEECCCCCEEEEEEE
Q ss_conf             44310128999895077459999987515777654224302313789889860898769971479995589847976888
Q batch____        35 GSHAYETRLKVSEGWQNGWWASMESNTWNTIHDNKKENAALNDVQVEVNYAIKLDDQWTVRPGMLTHFSSNGTRYGPYVK  114 (238)
Q Consensus        35 ~s~~~~~Rikv~h~~~Ng~g~~~e~~~~~~~~d~~~~~~~~~~~E~~~~y~~k~~d~~~l~PG~~~~~~~~~t~ykp~lk  114 (238)
                      ..+....-++.+..| +|+.+++...     ....-.........+.+...|...+ +.+..+...........-.-.+.
T Consensus       125 ~~~~~~~~~y~s~~~-~Gf~~~asy~-----~~~~~~~~~~~~~~~~~~~~Y~~g~-~~~~~~y~~~~~~~~~~~~~~~g  197 (289)
T d3prna_         125 GALDNYNGIAVTYSI-SGVNLYLSYV-----DPDQTVDSSLVTEEFGIAADWSNDM-ISLAAAYTTDAGGIVDNDIAFVG  197 (289)
T ss_dssp             STTTTCEEEEEEEEC-SSEEEEEEEE-----ETTTTSCGGGSCCEEEEEEEEECSS-EEEEEEEEESGGGCTTCCEEEEE
T ss_pred             CCCCCCEEEEEEEEE-CCEEEEEEEC-----CCCCCCCCCCCCCEEEEEEEECCCC-EEEEEEEEECCCCCCCCCEEEEE
T ss_conf             542244189984220-7749999940-----5887756666650689999813565-49999985114677764136777


Q ss_pred             EEEEECCCEEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEEECCEEEEEEEEEEEECCCCEECCCCCCCEEEEEE
Q ss_conf             77875387378888752000245666777555651478998999774430699997788741477030278540377789
Q batch____       115 LSWDATKDLNFGIRYRYDWKAYRQQDLSGDMSRDNVHRWDGYVTYHINSDFTFAWQTTLYSKQNDYRYANHKKWATENAF  194 (238)
Q Consensus       115 ~~Y~fd~~~~~~~RyRyd~~~~~~~~~~~~~~~~~~~r~d~~~~Y~~~~~~~~~y~~~~~~~~~~~~~~n~k~~~~e~~f  194 (238)
                      +.|.+.. +.+++-|..+           .....+...+.+...|.+. ++++........       .+++...+.  +
T Consensus       198 ~~y~~~~-~~~~~~~~~~-----------~~~~~~~~~~~lg~~Y~~g-~~t~~a~y~~~~-------~d~~~~~~~--l  255 (289)
T d3prna_         198 AAYKFND-AGTVGLNWYD-----------NGLSTAGDQVTLYGNYAFG-ATTVRAYVSDID-------RAGADTAYG--I  255 (289)
T ss_dssp             EEECCSS-SEEEEEEEEE-----------CTTSTTCSEEEEEEEEEET-TEEEEEEEEEEC-------STTCCCEEE--E
T ss_pred             EEEEECC-EEEEEEEECC-----------CCCCCCCEEEEEEEEEEEC-CEEEEEEEEEEC-------CCCCCEEEE--E
T ss_conf             6786222-2788885224-----------5677763069999999916-709999999612-------466421699--9


Q ss_pred             EEEEEECCCEEEEEEEEEEECCEECCCCCCCCCEEEEEEEEEE
Q ss_conf             9999957975569999974021103677644212799999985
Q batch____       195 VLQYHMTPDITPYIEYDYLDRQGVYNGRDNLSENSYRIGVSFK  237 (238)
Q Consensus       195 ~~~Yk~~~~w~PYvE~~~vd~~~~~~~~~~~~q~r~RvG~~Y~  237 (238)
                      -+.|++.+..+=|.+|+..+.          .+++..|||.|.
T Consensus       256 g~~Y~l~~~~~l~~~~g~~~~----------~~t~a~~Gv~~~  288 (289)
T d3prna_         256 GADYQFAEGVKVSGSVQSGFA----------NETVADVGVRFD  288 (289)
T ss_dssp             EEEEEEETTEEEEEEEEECTT----------CCEEEEEEEEEE
T ss_pred             EEEEECCCCEEEEEEEEECCC----------CCCEEEEEEEEE
T ss_conf             999956875799999874157----------750789879987