BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (400 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P0AG77 Nuclease sbcCD subunit D n=173 Tax=Proteobacteri... 827 0.0 UniRef50_D2T4P9 Exonuclease SbcD n=3 Tax=Erwinia RepID=D2T4P9_ERWPY 511 e-143 UniRef50_C7BK94 Nuclease sbccd subunit d n=1 Tax=Photorhabdus as... 507 e-142 UniRef50_D0ZEX0 Nuclease SbcCD, D subunit n=18 Tax=Proteobacteri... 491 e-137 UniRef50_B4RWA2 Exonuclease SbcD n=3 Tax=Alteromonadales RepID=B... 396 e-109 UniRef50_Q480G5 Exonuclease SbcD n=1 Tax=Colwellia psychrerythra... 393 e-108 UniRef50_A9BQD1 Nuclease SbcCD, D subunit n=5 Tax=Burkholderiale... 385 e-105 UniRef50_A6VXU9 Nuclease SbcCD, D subunit n=2 Tax=Marinomonas Re... 352 1e-95 UniRef50_A1SUG4 Exodeoxyribonuclease I subunit D n=2 Tax=Psychro... 328 2e-88 UniRef50_UPI0000E0E5D5 exonuclease subunit SbcD n=1 Tax=Glacieco... 308 3e-82 UniRef50_Q3JD79 Exodeoxyribonuclease I subunit D n=11 Tax=Bacter... 268 3e-70 UniRef50_C8NB09 Nuclease sbcCD subunit D (Fragment) n=1 Tax=Card... 256 1e-66 UniRef50_Q2FMB7 Exodeoxyribonuclease I subunit D n=2 Tax=cellula... 255 2e-66 UniRef50_Q2LRF1 Exonuclease n=8 Tax=Bacteria RepID=Q2LRF1_SYNAS 255 2e-66 UniRef50_D1Y745 Nuclease SbcCD, D subunit n=1 Tax=Pyramidobacter... 244 5e-63 UniRef50_B3EQD7 Nuclease SbcCD, D subunit n=1 Tax=Chlorobium pha... 239 1e-61 UniRef50_A5EW10 Exonuclease SbcD n=1 Tax=Dichelobacter nodosus V... 217 5e-55 UniRef50_C1TLY0 Exonuclease SbcD n=1 Tax=Dethiosulfovibrio pepti... 210 8e-53 UniRef50_A5WEF9 Nuclease SbcCD, D subunit n=3 Tax=Psychrobacter ... 208 2e-52 UniRef50_C8PYK6 Nuclease SbcCD, D subunit n=2 Tax=Pseudomonadale... 204 6e-51 UniRef50_A4BZB7 Exonuclease SbcD n=2 Tax=Flavobacteriaceae RepID... 195 2e-48 UniRef50_C9M6Q6 Nuclease SbcCD, D subunit n=1 Tax=Jonquetella an... 182 2e-44 UniRef50_C7PNA9 Nuclease SbcCD, D subunit n=1 Tax=Chitinophaga p... 181 6e-44 UniRef50_A6DE84 Nuclease SbcCD, D subunit n=1 Tax=Caminibacter m... 180 9e-44 UniRef50_Q1DDQ4 Nuclease SbcCD, D subunit n=3 Tax=Myxococcales R... 177 4e-43 UniRef50_A4VHU4 Exonuclease SbcD n=22 Tax=Gammaproteobacteria Re... 177 7e-43 UniRef50_Q1VZW8 Exonuclease SbcD n=1 Tax=Psychroflexus torquis A... 174 6e-42 UniRef50_Q3ICS5 Exonuclease sbcCD subunit D n=2 Tax=Alteromonada... 170 8e-41 UniRef50_A6LCR3 Putative exonuclease n=6 Tax=Bacteroidales RepID... 170 9e-41 UniRef50_D0LY15 Nuclease SbcCD, D subunit n=1 Tax=Haliangium och... 170 9e-41 UniRef50_Q5P494 Exonuclease SbcD n=1 Tax=Aromatoleum aromaticum ... 169 2e-40 UniRef50_A3XL99 Exonuclease SbcD n=1 Tax=Leeuwenhoekiella blande... 167 7e-40 UniRef50_A7LRG6 Putative uncharacterized protein n=5 Tax=Bactero... 166 1e-39 UniRef50_C5CAA0 Exodeoxyribonuclease I subunit D n=4 Tax=Microco... 166 1e-39 UniRef50_C9KXE7 Nuclease SbcCD, D subunit n=10 Tax=Bacteroides R... 163 9e-39 UniRef50_C7M699 Nuclease SbcCD, D subunit n=2 Tax=Capnocytophaga... 160 1e-37 UniRef50_C9RQA4 Nuclease SbcCD, D subunit n=1 Tax=Fibrobacter su... 159 2e-37 UniRef50_A6KXN3 Putative exonuclease n=5 Tax=Bacteroides RepID=A... 157 8e-37 UniRef50_B6QZR0 Nuclease SbcCD, D subunit n=2 Tax=Alphaproteobac... 155 3e-36 UniRef50_UPI000178998B nuclease SbcCD, D subunit n=1 Tax=Geobaci... 153 1e-35 UniRef50_C4L7Q3 Nuclease SbcCD, D subunit n=9 Tax=Gammaproteobac... 152 2e-35 UniRef50_Q2IN32 Exodeoxyribonuclease I subunit D n=3 Tax=Anaerom... 152 2e-35 UniRef50_D2MIT5 Exonuclease subunit SbcD (Fragment) n=1 Tax=Cand... 150 1e-34 UniRef50_O68033 Nuclease sbcCD subunit D n=1 Tax=Rhodobacter cap... 146 1e-33 UniRef50_A5N4G1 Predicted exonuclease, sbcD related n=45 Tax=Clo... 145 2e-33 UniRef50_C8WDX4 Nuclease SbcCD, D subunit n=1 Tax=Zymomonas mobi... 145 2e-33 UniRef50_A7V415 Putative uncharacterized protein n=2 Tax=Bactero... 145 3e-33 UniRef50_B7GYJ5 Exonuclease sbcD-like protein n=18 Tax=Acinetoba... 144 8e-33 UniRef50_B7KZ12 Nuclease SbcCD, D subunit n=8 Tax=Alphaproteobac... 142 3e-32 UniRef50_A7BEB8 Putative uncharacterized protein n=2 Tax=Actinom... 140 6e-32 UniRef50_D2NSE3 DNA repair exonuclease n=1 Tax=Rothia mucilagino... 140 8e-32 UniRef50_Q1NCL0 Nuclease SbcCD, D subunit n=1 Tax=Sphingomonas s... 139 2e-31 UniRef50_A1SK69 Exodeoxyribonuclease I subunit D n=2 Tax=Actinom... 139 3e-31 UniRef50_A3YYZ0 Putative exonuclease n=1 Tax=Synechococcus sp. W... 139 3e-31 UniRef50_B3CEC9 Putative uncharacterized protein n=4 Tax=Bactero... 138 3e-31 UniRef50_Q67MD2 DNA repair exonuclease n=1 Tax=Symbiobacterium t... 138 3e-31 UniRef50_Q2JDN8 Exodeoxyribonuclease I subunit D n=24 Tax=Actino... 137 5e-31 UniRef50_A4X568 Exodeoxyribonuclease I subunit D n=3 Tax=Micromo... 137 8e-31 UniRef50_A3WLK0 Exonuclease SbcD, putative n=1 Tax=Idiomarina ba... 136 1e-30 UniRef50_C6XKD2 Nuclease SbcCD, D subunit n=1 Tax=Hirschia balti... 133 9e-30 UniRef50_C6R472 Exodeoxyribonuclease I subunit D n=1 Tax=Rothia ... 133 1e-29 UniRef50_Q0HTQ0 Exodeoxyribonuclease I subunit D n=26 Tax=Gammap... 132 2e-29 UniRef50_P23479 Nuclease sbcCD subunit D n=16 Tax=Bacillales Rep... 131 4e-29 UniRef50_C9LH67 Exonuclease SbcCD, D subunit n=1 Tax=Prevotella ... 131 5e-29 UniRef50_A7VIT3 Putative uncharacterized protein n=1 Tax=Clostri... 131 6e-29 UniRef50_D1VPG1 Nuclease SbcCD, D subunit n=1 Tax=Frankia sp. Eu... 130 7e-29 UniRef50_UPI0001AF0806 nuclease SbcCD, D subunit n=1 Tax=Strepto... 130 9e-29 UniRef50_A7HCA1 Nuclease SbcCD, D subunit n=1 Tax=Anaeromyxobact... 130 1e-28 UniRef50_D1ADM3 Nuclease SbcCD, D subunit n=2 Tax=Actinomycetale... 129 3e-28 UniRef50_O51769 Nuclease sbcCD subunit D n=23 Tax=Borrelia RepID... 127 8e-28 UniRef50_B8KMM7 Nuclease SbcCD, D subunit n=1 Tax=gamma proteoba... 127 9e-28 UniRef50_C7MH54 Exodeoxyribonuclease I subunit D n=3 Tax=Microco... 127 1e-27 UniRef50_B5IJR3 Exonuclease n=1 Tax=Cyanobium sp. PCC 7001 RepID... 125 2e-27 UniRef50_A8FTM6 Nuclease SbcCD, D subunit n=25 Tax=Gammaproteoba... 123 9e-27 UniRef50_D2RLP4 Nuclease SbcCD, D subunit n=2 Tax=Acidaminococcu... 123 1e-26 UniRef50_C8WRD7 Nuclease SbcCD, D subunit n=2 Tax=Alicyclobacill... 122 3e-26 UniRef50_C9L5R8 DNA repair exonuclease n=1 Tax=Blautia hansenii ... 122 3e-26 UniRef50_A8VW68 N-acetyl-gamma-glutamyl-phosphate reductase n=1 ... 121 5e-26 UniRef50_C0EV38 Putative uncharacterized protein n=1 Tax=Eubacte... 120 8e-26 UniRef50_A8U5M2 Exonuclease sbcD n=1 Tax=Carnobacterium sp. AT7 ... 120 9e-26 UniRef50_O67727 ATP-dependent dsDNA exonuclease n=2 Tax=Aquifica... 120 1e-25 UniRef50_D1PAG0 Nuclease SbcCD, D subunit n=1 Tax=Prevotella cop... 120 1e-25 UniRef50_Q0S486 ATP-dependent dsDNA exonuclease SbcD n=6 Tax=Act... 120 1e-25 UniRef50_Q0K4S8 DNA repair exonuclease, SbcD n=6 Tax=Bacteria Re... 120 1e-25 UniRef50_B3JFY8 Putative uncharacterized protein n=1 Tax=Bactero... 119 2e-25 UniRef50_B7AP64 Putative uncharacterized protein n=1 Tax=Bactero... 119 3e-25 UniRef50_C9LQV4 Putative exonuclease SbcD n=1 Tax=Dialister invi... 117 7e-25 UniRef50_B2GFI3 Nuclease SbcCD subunit D n=1 Tax=Kocuria rhizoph... 117 8e-25 UniRef50_C2M1T3 Nuclease SbcCD, D subunit n=3 Tax=Bacteroidetes ... 116 1e-24 UniRef50_B8D1T4 Exodeoxyribonuclease I subunit D n=3 Tax=Clostri... 116 2e-24 UniRef50_C0W8J2 DsDNA exonuclease subunit n=1 Tax=Actinomyces ur... 116 2e-24 UniRef50_A6TVN1 Nuclease SbcCD, D subunit n=6 Tax=Clostridiaceae... 115 4e-24 UniRef50_C8XKJ7 Nuclease SbcCD, D subunit n=2 Tax=Actinomycetale... 113 1e-23 UniRef50_A8L1U9 Nuclease SbcCD, D subunit n=2 Tax=Actinomycetale... 113 1e-23 UniRef50_Q07GQ3 Exonuclease SbcD, putative n=1 Tax=Roseobacter d... 112 3e-23 UniRef50_D0L9F6 Nuclease SbcCD, D subunit n=5 Tax=Actinomycetale... 111 4e-23 UniRef50_A0LM47 Exodeoxyribonuclease I subunit D n=1 Tax=Syntrop... 111 5e-23 UniRef50_B5I7A7 Exonuclease n=3 Tax=Actinomycetales RepID=B5I7A7... 111 5e-23 UniRef50_D1PQD5 Exonuclease SbcD n=1 Tax=Subdoligranulum variabi... 110 7e-23 UniRef50_D1NTD7 Putative nuclease SbcCD, D subunit n=1 Tax=Bifid... 110 8e-23 UniRef50_C3WDH5 Nuclease SbcCD n=1 Tax=Fusobacterium mortiferum ... 110 9e-23 UniRef50_C3NXC1 Exonuclease SbcD n=22 Tax=Vibrio RepID=C3NXC1_VIBCJ 109 2e-22 UniRef50_Q1J058 Nuclease SbcCD, D subunit n=3 Tax=Deinococcus Re... 108 2e-22 UniRef50_C8PR34 Exodeoxyribonuclease I subunit D n=1 Tax=Trepone... 108 2e-22 UniRef50_C8P3T7 Exonuclease n=1 Tax=Erysipelothrix rhusiopathiae... 108 2e-22 UniRef50_A9BEV6 Nuclease SbcCD, D subunit n=1 Tax=Petrotoga mobi... 108 2e-22 UniRef50_B0NZF1 Putative uncharacterized protein n=1 Tax=Clostri... 108 3e-22 UniRef50_A1ZGU7 DNA repair exonuclease n=1 Tax=Microscilla marin... 107 6e-22 UniRef50_D1BIQ6 Exodeoxyribonuclease I subunit D n=2 Tax=Actinob... 107 1e-21 UniRef50_B1YES6 Nuclease SbcCD, D subunit n=1 Tax=Exiguobacteriu... 107 1e-21 UniRef50_A0AJ98 SbcD protein n=27 Tax=Bacillales RepID=A0AJ98_LISW6 107 1e-21 UniRef50_C4V2E2 Exonuclease SbcD n=1 Tax=Selenomonas flueggei AT... 106 1e-21 UniRef50_C7GI85 Exonuclease SbcD (Fragment) n=1 Tax=Roseburia in... 104 7e-21 UniRef50_D2QSS6 Nuclease SbcCD, D subunit n=1 Tax=Spirosoma ling... 103 9e-21 UniRef50_D2LF15 Nuclease SbcCD, D subunit n=1 Tax=Rhodomicrobium... 103 1e-20 UniRef50_C2KSA5 Possible exonuclease SbcD n=2 Tax=Mobiluncus mul... 103 1e-20 UniRef50_B5YJR9 Exonuclease SbcD n=1 Tax=Thermodesulfovibrio yel... 103 1e-20 UniRef50_Q03P49 DNA repair exonuclease n=46 Tax=Lactobacillales ... 102 2e-20 UniRef50_C8P7X3 Exonuclease SbcD n=1 Tax=Lactobacillus antri DSM... 102 2e-20 UniRef50_B0TDB7 Exonuclease sbcd n=1 Tax=Heliobacterium modestic... 102 2e-20 UniRef50_C7HA25 Exonuclease SbcD n=4 Tax=Clostridiales RepID=C7H... 102 3e-20 UniRef50_C0VZX2 DsDNA exonuclease subunit n=1 Tax=Actinomyces co... 101 6e-20 UniRef50_B8I3W2 Nuclease SbcCD, D subunit n=5 Tax=Clostridium Re... 99 2e-19 UniRef50_C7TAC2 Exonuclease n=15 Tax=Lactobacillus RepID=C7TAC2_... 99 2e-19 UniRef50_C9KJP5 Exonuclease n=3 Tax=Veillonellaceae RepID=C9KJP5... 99 3e-19 UniRef50_C6VPS0 Exonuclease SbcD n=5 Tax=Lactobacillales RepID=C... 99 4e-19 UniRef50_C7RGF6 Nuclease SbcCD, D subunit n=4 Tax=Anaerococcus R... 99 4e-19 UniRef50_B6WA19 Putative uncharacterized protein n=1 Tax=Anaeroc... 98 5e-19 UniRef50_UPI0001C366D6 nuclease SbcCD, D subunit n=1 Tax=Clostri... 98 5e-19 UniRef50_C6VTU7 Nuclease SbcCD, D subunit n=1 Tax=Dyadobacter fe... 98 6e-19 UniRef50_A9KNM2 Nuclease SbcCD, D subunit n=12 Tax=Bacteria RepI... 97 1e-18 UniRef50_C7N5B0 Exonuclease SbcD n=1 Tax=Slackia heliotrinireduc... 97 1e-18 UniRef50_A5ZTK8 Putative uncharacterized protein n=3 Tax=Firmicu... 97 1e-18 UniRef50_Q6GH61 Nuclease sbcCD subunit D n=52 Tax=Staphylococcus... 97 1e-18 UniRef50_D0LLB1 Nuclease SbcCD, D subunit n=1 Tax=Haliangium och... 96 2e-18 UniRef50_B9JT06 ATP-dependent dsDNA exonuclease protein n=3 Tax=... 96 3e-18 UniRef50_Q73RC0 Nuclease SbcCD, D subunit, putative n=1 Tax=Trep... 96 3e-18 UniRef50_C7MLN3 Exonuclease SbcD n=1 Tax=Cryptobacterium curtum ... 95 4e-18 UniRef50_A7VZC9 Putative uncharacterized protein n=1 Tax=Clostri... 95 5e-18 UniRef50_C6D8R4 Nuclease SbcCD, D subunit n=81 Tax=Bacillales Re... 95 5e-18 UniRef50_Q49XE0 Nuclease sbcCD subunit D n=12 Tax=Staphylococcus... 93 1e-17 UniRef50_D2MLP9 Exonuclease SbcCD, D subunit n=1 Tax=Bulleidia e... 93 2e-17 UniRef50_B5HB15 Nuclease SbcCD n=1 Tax=Streptomyces pristinaespi... 92 2e-17 UniRef50_B4U9G5 Nuclease SbcCD, D subunit n=1 Tax=Hydrogenobacul... 92 3e-17 UniRef50_C2EEA5 Exonuclease n=1 Tax=Lactobacillus ruminis ATCC 2... 92 3e-17 UniRef50_C2BSE2 Exonuclease SbcD n=1 Tax=Mobiluncus curtisii ATC... 92 5e-17 UniRef50_UPI00016C3AE3 ATP-dependent dsDNA exonuclease n=1 Tax=G... 92 5e-17 UniRef50_C1I2I4 Nuclease SbcCD n=1 Tax=Clostridium sp. 7_2_43FAA... 91 6e-17 UniRef50_A6BHS2 Putative uncharacterized protein n=5 Tax=Clostri... 91 9e-17 UniRef50_A4XJU8 Nuclease SbcCD, D subunit n=1 Tax=Caldicellulosi... 91 1e-16 UniRef50_UPI00019735BC nuclease SbcCD, D subunit n=1 Tax=Clostri... 90 2e-16 UniRef50_C4FEI0 Putative uncharacterized protein n=1 Tax=Bifidob... 89 3e-16 UniRef50_B3QT16 Nuclease SbcCD, D subunit n=1 Tax=Chloroherpeton... 89 4e-16 UniRef50_C1XNQ0 Exodeoxyribonuclease I subunit D n=2 Tax=Meiothe... 88 7e-16 UniRef50_C0EE10 Putative uncharacterized protein n=1 Tax=Clostri... 87 1e-15 UniRef50_Q3ZXH4 Nuclease SbcD n=5 Tax=Dehalococcoides RepID=Q3ZX... 87 1e-15 UniRef50_C5NXT6 Nuclease sbcCD subunit D n=1 Tax=Gemella haemoly... 87 1e-15 UniRef50_B9MRD8 Nuclease SbcCD, D subunit n=1 Tax=Anaerocellum t... 86 3e-15 UniRef50_C0Z548 Putative exonuclease sbcCD subunit D n=1 Tax=Bre... 85 6e-15 UniRef50_B0MBW6 Putative uncharacterized protein n=1 Tax=Anaeros... 84 8e-15 UniRef50_B9EBU8 Putative uncharacterized protein n=1 Tax=Macroco... 82 3e-14 UniRef50_UPI00016C0A35 exonuclease sbcD n=1 Tax=Epulopiscium sp.... 82 4e-14 UniRef50_B2HL38 DNA repair exonuclease n=1 Tax=Mycobacterium mar... 82 4e-14 UniRef50_C3RMV8 Exonuclease sbcD n=3 Tax=Bacteria RepID=C3RMV8_9... 82 4e-14 UniRef50_D1VDQ0 Nuclease SbcCD, D subunit n=1 Tax=Frankia sp. Eu... 81 6e-14 UniRef50_D1BNU6 Nuclease SbcCD, D subunit n=3 Tax=Veillonella Re... 81 6e-14 UniRef50_C5RC55 Exonuclease n=1 Tax=Weissella paramesenteroides ... 81 6e-14 UniRef50_Q5LYZ3 ATP-dependent dsDNA exonuclease n=8 Tax=Bacteria... 81 8e-14 UniRef50_B2S3L6 Possible exonuclease n=2 Tax=Treponema pallidum ... 80 1e-13 UniRef50_A7NIU3 Nuclease SbcCD, D subunit n=6 Tax=Chloroflexi (c... 80 1e-13 UniRef50_Q5SIS5 Exonuclease SbcD n=3 Tax=Thermus RepID=Q5SIS5_THET8 80 1e-13 UniRef50_B9K7R6 Exonuclease n=6 Tax=Thermotogaceae RepID=B9K7R6_... 80 2e-13 UniRef50_A3HX94 DNA repair exonuclease n=2 Tax=Bacteroidetes Rep... 79 3e-13 UniRef50_C7XXV6 Nuclease SbcCD n=1 Tax=Lactobacillus coleohomini... 77 1e-12 UniRef50_A8F497 Nuclease SbcCD, D subunit n=1 Tax=Thermotoga let... 73 2e-11 UniRef50_C6JB59 Putative uncharacterized protein n=1 Tax=Ruminoc... 73 2e-11 UniRef50_B6WT33 Putative uncharacterized protein n=1 Tax=Desulfo... 72 4e-11 UniRef50_D1C2F9 Nuclease SbcCD, D subunit n=1 Tax=Sphaerobacter ... 71 6e-11 UniRef50_A7BMU6 Exonuclease SbcD n=1 Tax=Beggiatoa sp. SS RepID=... 69 3e-10 UniRef50_C0AYW7 Putative uncharacterized protein n=1 Tax=Proteus... 69 3e-10 UniRef50_B9NII9 Predicted protein (Fragment) n=1 Tax=Populus tri... 67 9e-10 UniRef50_B9KXS7 Putative nuclease SbcCD, D subunit subfamily n=1... 67 2e-09 UniRef50_Q2S4Q6 Nuclease SbcCD, D subunit subfamily, putative n=... 66 2e-09 UniRef50_C0FS04 Putative uncharacterized protein n=1 Tax=Rosebur... 65 3e-09 UniRef50_A2C9B6 DNA repair exonuclease n=6 Tax=Cyanobacteria Rep... 65 5e-09 UniRef50_A2BM15 Predicted DNA repair exonuclease n=1 Tax=Hyperth... 65 5e-09 UniRef50_B8HPI4 Nuclease SbcCD, D subunit n=28 Tax=Cyanobacteria... 62 4e-08 UniRef50_Q96YR6 DNA double-strand break repair protein mre11 n=1... 61 6e-08 UniRef50_B7IH42 Exonuclease sbcd n=1 Tax=Thermosipho africanus T... 61 6e-08 UniRef50_Q4JUH5 Putative uncharacterized protein n=2 Tax=Coryneb... 60 1e-07 UniRef50_Q0IAY7 DNA repair exonuclease n=1 Tax=Synechococcus sp.... 59 2e-07 UniRef50_C6P7X1 Nuclease SbcCD, D subunit n=1 Tax=Thermoanaeroba... 59 3e-07 UniRef50_D1B7B2 Metallophosphoesterase n=1 Tax=Thermanaerovibrio... 58 5e-07 UniRef50_A8HRM4 Exonuclease n=1 Tax=Azorhizobium caulinodans ORS... 57 1e-06 UniRef50_Q110K3 Nuclease SbcCD, D subunit n=3 Tax=Cyanobacteria ... 57 1e-06 UniRef50_A8A960 Metallophosphoesterase n=1 Tax=Ignicoccus hospit... 56 2e-06 UniRef50_A3X5K0 Exonuclease SbcD n=4 Tax=Rhodobacteraceae RepID=... 56 3e-06 UniRef50_A8EU07 Putative uncharacterized protein n=1 Tax=Arcobac... 55 3e-06 UniRef50_Q041R3 DNA repair exonuclease n=28 Tax=Lactobacillus Re... 55 4e-06 UniRef50_UPI0001C419A3 DNA double-strand break repair protein Mr... 55 5e-06 UniRef50_D2EG17 Metallophosphoesterase n=1 Tax=Candidatus Parvar... 55 5e-06 UniRef50_C5RCI7 DNA repair exonuclease n=1 Tax=Weissella parames... 55 5e-06 UniRef50_Q2NFC6 DNA double-strand break repair protein Mre11 n=1... 54 7e-06 UniRef50_Q8TXI3 DNA double-strand break repair protein mre11 n=1... 54 8e-06 UniRef50_C0QDX0 DNA repair exonuclease family protein n=1 Tax=De... 54 1e-05 UniRef50_C0GDI6 Metallophosphoesterase n=1 Tax=Dethiobacter alka... 54 1e-05 UniRef50_A4J7M8 Metallophosphoesterase n=1 Tax=Desulfotomaculum ... 54 1e-05 UniRef50_C0FS05 Putative uncharacterized protein n=1 Tax=Rosebur... 53 2e-05 UniRef50_A7HL21 Metallophosphoesterase n=1 Tax=Fervidobacterium ... 53 2e-05 UniRef50_Q67M04 Putative phosphoesterase n=1 Tax=Symbiobacterium... 53 2e-05 UniRef50_A5GT58 DNA repair exonuclease n=1 Tax=Synechococcus sp.... 53 2e-05 UniRef50_A5UJE8 DNA repair exonuclease (SbcD/Mre11-family), Rad3... 53 3e-05 UniRef50_B2A8B5 Metallophosphoesterase n=1 Tax=Natranaerobius th... 52 3e-05 UniRef50_B5IR16 Ser/Thr protein phosphatase family protein n=1 T... 52 4e-05 UniRef50_B6V2S2 Gp21.3 n=1 Tax=Bacillus phage SPO1 RepID=B6V2S2_... 52 4e-05 UniRef50_Q3SU71 Exonuclease SbcD n=5 Tax=Alphaproteobacteria Rep... 52 5e-05 UniRef50_C4LJP3 Putative uncharacterized protein n=1 Tax=Coryneb... 52 5e-05 UniRef50_C4ZHC2 DNA repair exonuclease n=3 Tax=Clostridiales Rep... 52 5e-05 UniRef50_Q9HLR7 DNA double-strand break repair protein mre11 n=3... 51 7e-05 UniRef50_C6JPT8 Nuclease sbcCD subunit D n=2 Tax=Fusobacterium R... 51 7e-05 UniRef50_B8J071 Metallophosphoesterase n=1 Tax=Desulfovibrio des... 51 8e-05 UniRef50_Q5FS56 Putative exonuclease n=1 Tax=Gluconobacter oxyda... 51 8e-05 UniRef50_B3T3D7 Putative calcineurin-like phosphoesterase n=1 Ta... 50 1e-04 UniRef50_A5VH45 Metallophosphoesterase n=1 Tax=Sphingomonas witt... 50 1e-04 UniRef50_P62132 DNA double-strand break repair protein mre11 n=1... 50 2e-04 UniRef50_C6IVB9 Metallophosphoesterase n=1 Tax=Paenibacillus sp.... 50 2e-04 UniRef50_Q46FJ9 DNA repair protein n=1 Tax=Methanosarcina barker... 49 2e-04 UniRef50_A4YET4 Metallophosphoesterase n=1 Tax=Metallosphaera se... 49 3e-04 UniRef50_A7VGQ3 Putative uncharacterized protein n=2 Tax=Clostri... 49 3e-04 UniRef50_Q39WB4 Metallophosphoesterase n=2 Tax=Geobacter RepID=Q... 49 4e-04 UniRef50_B1VFW1 Putative uncharacterized protein n=1 Tax=Coryneb... 49 4e-04 UniRef50_A8MDQ3 Metallophosphoesterase n=1 Tax=Caldivirga maquil... 49 5e-04 UniRef50_C5SCL6 Metallophosphoesterase n=1 Tax=Allochromatium vi... 49 5e-04 UniRef50_Q8PUY5 DNA double-strand break repair protein mre11 n=2... 48 6e-04 UniRef50_A1RR97 Metallophosphoesterase n=5 Tax=Thermoproteaceae ... 48 6e-04 UniRef50_C7PVY9 Metallophosphoesterase n=5 Tax=Actinomycetales R... 48 7e-04 UniRef50_UPI000038E4E2 DNA repair protein n=1 Tax=Ferroplasma ac... 48 7e-04 UniRef50_C5RIL1 Metallophosphoesterase n=1 Tax=Clostridium cellu... 48 8e-04 UniRef50_Q12VW7 Metallophosphoesterase domain protein n=1 Tax=Me... 47 0.001 UniRef50_Q7P2Q8 EXONUCLEASE SBCD n=8 Tax=Fusobacterium RepID=Q7P... 47 0.001 UniRef50_D0BLI1 DNA repair exonuclease n=1 Tax=Granulicatella el... 47 0.001 UniRef50_Q6L2H7 DNA repair protein n=1 Tax=Picrophilus torridus ... 47 0.001 UniRef50_Q1D3U1 Metallophosphoesterase n=1 Tax=Myxococcus xanthu... 47 0.002 UniRef50_B5K3U2 Exonuclease SbcD n=1 Tax=Octadecabacter antarcti... 47 0.002 UniRef50_A8KXH2 Metallophosphoesterase n=2 Tax=Actinomycetales R... 47 0.002 UniRef50_C6A1X6 DNA double-strand break repair Mre11 nuclease n=... 47 0.002 UniRef50_Q0FZV9 Putative exonuclease n=1 Tax=Fulvimarina pelagi ... 46 0.002 UniRef50_UPI0001B434BF exonucleases SbcD n=2 Tax=Listeria monocy... 46 0.002 UniRef50_B1L7G0 DNA repair exonuclease, SbcD n=1 Tax=Candidatus ... 46 0.002 UniRef50_D2LYR1 Metallophosphoesterase n=1 Tax=Bacillus cellulos... 46 0.002 >UniRef50_P0AG77 Nuclease sbcCD subunit D n=173 Tax=Proteobacteria RepID=SBCD_ECO57 Length = 400 Score = 827 bits (2136), Expect = 0.0, Method: Compositional matrix adjust. Identities = 400/400 (100%), Positives = 400/400 (100%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR Sbjct: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG Sbjct: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII Sbjct: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 Query: 181 ATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGS 240 ATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGS Sbjct: 181 ATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGS 240 Query: 241 PIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVS 300 PIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVS Sbjct: 241 PIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVS 300 Query: 301 QEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSEL 360 QEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSEL Sbjct: 301 QEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSEL 360 Query: 361 SVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHEA 400 SVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHEA Sbjct: 361 SVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHEA 400 >UniRef50_D2T4P9 Exonuclease SbcD n=3 Tax=Erwinia RepID=D2T4P9_ERWPY Length = 470 Score = 511 bits (1315), Expect = e-143, Method: Compositional matrix adjust. Identities = 257/405 (63%), Positives = 304/405 (75%), Gaps = 6/405 (1%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRI+HT+DWHLGQ FY+KSR AEHQAFLDWLLE A+T Q DAIIVAGD+FD GSPPSYAR Sbjct: 64 MRIIHTADWHLGQFFYTKSRAAEHQAFLDWLLEQAETQQADAIIVAGDIFDNGSPPSYAR 123 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ----ILP 116 LYNRFVV LQ TGC LVVL GNHDSVA LNESR+++A LNT V+A+ + +L Sbjct: 124 QLYNRFVVKLQTTGCQLVVLGGNHDSVAMLNESRELLACLNTRVIAAVDEDIRQQVLVLN 183 Query: 117 RRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRG--D 174 RRDG PGA+LC IPFLRPRDI+ SQ+G +G EKQQ LL AI+D+YQ+ + +A R Sbjct: 184 RRDGQPGALLCAIPFLRPRDILRSQSGQSGREKQQSLLEAISDHYQRCWQEALAQRDALG 243 Query: 175 QPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEH 234 PLPIIATGHLTT+G +KSDAVRDIYIGTLDAFPA FPPADYIALGHIHRAQ I +H Sbjct: 244 LPLPIIATGHLTTMGVTKSDAVRDIYIGTLDAFPADGFPPADYIALGHIHRAQRIADSDH 303 Query: 235 VRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLE 294 +RY GSPIPLSFDE GK+K V V F GKL V L +P+ QPM ++KG L I QL Sbjct: 304 IRYSGSPIPLSFDELGKAKSVMRVDFHAGKLAGVTELPIPLFQPMQMIKGSLEQIERQLA 363 Query: 295 QWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQR 354 Q + ++ +WLDIEI TD YL + QR+I+ LT +LPVEV+L+RRSREQRE+V+A QQ Sbjct: 364 QLKPDARGKTIWLDIEIVTDAYLSEPQRRIEELTAALPVEVVLLRRSREQREQVIARQQN 423 Query: 355 ETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHE 399 ETLSELSVEEVF RRLA + +R+ LF TL + E + Sbjct: 424 ETLSELSVEEVFARRLASAPNQPERPERISALFAQTLEAVRHEEQ 468 >UniRef50_C7BK94 Nuclease sbccd subunit d n=1 Tax=Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949 RepID=C7BK94_PHOAA Length = 488 Score = 507 bits (1305), Expect = e-142, Method: Compositional matrix adjust. Identities = 247/402 (61%), Positives = 311/402 (77%), Gaps = 9/402 (2%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRI+HTSDWHLGQ F++KSR AEH+ FL WL+E + +QVDA+IVAGDVFDTGSPPSYAR Sbjct: 70 MRIIHTSDWHLGQYFFTKSRAAEHKHFLHWLVEQIKNYQVDALIVAGDVFDTGSPPSYAR 129 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ----ILP 116 LYNRFVV LQ TGC L++L GNHDSVATLNES+++++ LNTTV+A+A PQ IL Sbjct: 130 ELYNRFVVELQPTGCQLIILGGNHDSVATLNESKELLSCLNTTVIANAEENPQKQIKILN 189 Query: 117 RRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQ- 175 ++G GA+LC IPFLRPRDI+TSQAG +G +KQ L AI ++Y + Y AC+LR DQ Sbjct: 190 TQEGNAGAILCAIPFLRPRDIMTSQAGQSGEQKQLALQEAIAEHYNRLYRQACELR-DQL 248 Query: 176 --PLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGME 233 PLP+IATGHLTT+GAS +D+VRDIYIGTLDAFPAQ FPPADYIALGHIHR QI+ E Sbjct: 249 NIPLPVIATGHLTTIGASVTDSVRDIYIGTLDAFPAQAFPPADYIALGHIHRPQIVAKSE 308 Query: 234 HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQL 293 H+RY GSPIPLSFDE G+ K + LV F+ GKLES++ L VP QPM +++G+L I QL Sbjct: 309 HIRYSGSPIPLSFDEVGQEKSLCLVEFAQGKLESIKLLPVPQYQPMQLIRGNLQQIEQQL 368 Query: 294 EQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQ 353 + + D + PVWLDIE+ T +YLHDIQ++IQ++ LPVEV+L+RR++ QR+ +L + Sbjct: 369 QTFNDYQGKQPVWLDIEVATQDYLHDIQKRIQSMVAELPVEVILLRRAKIQRQNILTKEN 428 Query: 354 RETLSELSVEEVFNRRLALEEL-DESQQQRLQHLFTTTLHTL 394 RETL+ELS+ EVF RRL EL DE ++RL LF TL+ + Sbjct: 429 RETLTELSINEVFARRLEQTELNDEEHKKRLTTLFEQTLNEI 470 >UniRef50_D0ZEX0 Nuclease SbcCD, D subunit n=18 Tax=Proteobacteria RepID=D0ZEX0_EDWTE Length = 410 Score = 491 bits (1263), Expect = e-137, Method: Compositional matrix adjust. Identities = 246/399 (61%), Positives = 297/399 (74%), Gaps = 5/399 (1%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR++HTSDWHLGQ+FY KSR EH+AFLDWLL A+ Q DAIIVAGD+FDTG+PPSYAR Sbjct: 1 MRLIHTSDWHLGQHFYGKSRADEHRAFLDWLLLQAEQQQADAIIVAGDLFDTGTPPSYAR 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASA--GHAPQILPRR 118 LYNRFVV LQ GC L+VLAGNHDSVATLNESR+++A L+T V+A A AP +L RR Sbjct: 61 ELYNRFVVALQGRGCQLIVLAGNHDSVATLNESRELLACLHTQVIAGAHADDAPLLLRRR 120 Query: 119 DGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGD--QP 176 DG+PGA+LC +PFLRPRD++ S+AG + EKQ L AI+D+Y Y A L+ QP Sbjct: 121 DGSPGAILCAVPFLRPRDLLQSRAGQSAAEKQLALQQAISDHYHALYQRALALQASLAQP 180 Query: 177 LPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVR 236 LPI+ATGHLTTVGAS S++VRDIYIGTLDA PA FPPADYIALGHIHR Q +G EH+R Sbjct: 181 LPIVATGHLTTVGASGSESVRDIYIGTLDALPASAFPPADYIALGHIHRPQRVGHAEHIR 240 Query: 237 YCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQW 296 Y GSPIPLSFDE G SK V LVT + G + L +P TQPM +LKG L I A +E Sbjct: 241 YSGSPIPLSFDELGSSKSVCLVTLAYGSAPQITQLPIPQTQPMRLLKGSLTEIGAAMEAL 300 Query: 297 RDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRET 356 R ++ + PVWLDIEI +D +L + +R +Q E+LPVE+LL+RRSREQR+R L Q ET Sbjct: 301 RPLATDKPVWLDIEIDSDGWLSESERTLQQQAETLPVEILLLRRSREQRQRALTMQAGET 360 Query: 357 LSELSVEEVFNRRLALE-ELDESQQQRLQHLFTTTLHTL 394 LSEL+ ++VF+RRLALE E D QQ R Q LF L + Sbjct: 361 LSELTPDDVFSRRLALEQESDPQQQARAQRLFQQVLQEI 399 >UniRef50_B4RWA2 Exonuclease SbcD n=3 Tax=Alteromonadales RepID=B4RWA2_ALTMD Length = 515 Score = 396 bits (1018), Expect = e-109, Method: Compositional matrix adjust. Identities = 211/454 (46%), Positives = 278/454 (61%), Gaps = 67/454 (14%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLGQ+F++KSR+ EH AFL WLL+ + HQ+DAIIVAGDVFDTG+PPSYAR Sbjct: 24 MKILHTSDWHLGQSFFTKSRKKEHAAFLKWLLQQVEAHQIDAIIVAGDVFDTGTPPSYAR 83 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASA-GHAPQ---ILP 116 LY+ F+ LQ C LVVL GNHDSV+ LNES+ ++ +LN+ V+AS G + L Sbjct: 84 ELYHAFIGELQGMQCTLVVLGGNHDSVSVLNESKALLKYLNSHVIASTYGEISEQVIALK 143 Query: 117 RRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRG--- 173 R G P AVLC +PF+RPRD++ S++G + +K+Q L AI +Y Y++A LR Sbjct: 144 NRKGQPSAVLCAVPFIRPRDVLVSESGQSATDKRQALGNAIKQHYASLYSEALTLRNTLG 203 Query: 174 ----------DQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHI 223 +PIIATGHLT +G S+S++VRDIYIGTL+ F A+ FPPADYIALGHI Sbjct: 204 NNRLEEGIDHSAAIPIIATGHLTALGVSQSESVRDIYIGTLEGFDAKGFPPADYIALGHI 263 Query: 224 HRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSN-GKLESVENLNVPVTQPMAVL 282 HR Q + EH+RY GSPIPLSFDE K + LV F ++ L VP Q M V+ Sbjct: 264 HRPQKVAKAEHIRYSGSPIPLSFDELTSQKQIVLVEFDGVSTTPNISTLPVPRFQAMEVI 323 Query: 283 KGDLASITAQLEQW------------RDVSQEP------------------PVWLDIEIT 312 KGDL +I A + + ++ S EP PVWL IE+ Sbjct: 324 KGDLKAIEAMINESEAIAYASLANEDQNASSEPLASHEASSSNEKPFGSKDPVWLCIEVE 383 Query: 313 TDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLAL 372 T++YL D+Q++IQ L E E+L ++R R++ + L+ +Q LSELSV EVF RLAL Sbjct: 384 TEDYLTDLQQRIQGLLEGKNAEILQLKRMRKRTVKSLSEKQNIQLSELSVNEVFEARLAL 443 Query: 373 EELDE-------------------SQQQRLQHLF 387 E LDE S+ +R++HLF Sbjct: 444 ESLDEEPNETSNEASELPQKNTEPSRIKRIKHLF 477 >UniRef50_Q480G5 Exonuclease SbcD n=1 Tax=Colwellia psychrerythraea 34H RepID=Q480G5_COLP3 Length = 506 Score = 393 bits (1009), Expect = e-108, Method: Compositional matrix adjust. Identities = 212/430 (49%), Positives = 276/430 (64%), Gaps = 42/430 (9%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRI+HTSDWHLGQ FY KSR EHQ FL WLL H +DAIIVAGD+FDT +PPSYAR Sbjct: 1 MRIIHTSDWHLGQYFYGKSRANEHQQFLTWLLAQVTLHNIDAIIVAGDIFDTSTPPSYAR 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASA------------ 108 +Y F+ L T C L++LAGNHDSVA L+ES+ ++A L+T V+ Sbjct: 61 EMYFDFIAKLHVTQCQLIILAGNHDSVAMLSESQAVLASLSTRVITQVIPASLSEDELEE 120 Query: 109 -GHAPQILP--RRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHY 165 + Q+ P DG A++C IPF+RPRD+I S+AG + +KQQ L AI+D+YQ Y Sbjct: 121 KALSKQVFPLHDADGKTTAIICAIPFVRPRDVIRSRAGQSASDKQQSLQQAISDHYQYLY 180 Query: 166 ------ADACKLRGDQPLPIIATGHLTTVGA----SKSDAVRDIYIGTLDAFPAQNFPPA 215 ADA + LPIIATGHLT +G SKSD+VRDIYIG+L+AFPA FPPA Sbjct: 181 QQARKQADAFEKTEGIALPIIATGHLTALGVSINDSKSDSVRDIYIGSLEAFPASAFPPA 240 Query: 216 DYIALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPV 275 DYIALGHIHRAQ + EH+RYCGSPI LSFDE + K V +V F++GKL VE L VP Sbjct: 241 DYIALGHIHRAQQVAKSEHIRYCGSPIALSFDEAKQDKRVLMVEFTSGKLNQVEALIVPC 300 Query: 276 TQPMAVLKGDLASITAQLEQW------RDVSQEPP----VWLDIEITTDEYLHDIQRKIQ 325 QP+ ++K + + L++ R V+++ P WLDIEI ++L D+ +++ Sbjct: 301 FQPLYMVKTSVDELETSLQETLVAFEERQVAEKFPASVKAWLDIEIDNGDHLSDLSQRVT 360 Query: 326 ALTESLPVEVLLVRRSREQRER---VLASQQRETLSELSVEEVFNRRLA-LE-ELDE--S 378 L +P EVLLVRR ++ R+R L+ Q TLSELS+ EVF+ RL+ LE + DE + Sbjct: 361 ELAVDMPFEVLLVRRCKKARQRRQAQLSQQDNSTLSELSLTEVFDSRLSQLEWQTDEEVA 420 Query: 379 QQQRLQHLFT 388 ++ RL LFT Sbjct: 421 RKTRLTQLFT 430 >UniRef50_A9BQD1 Nuclease SbcCD, D subunit n=5 Tax=Burkholderiales RepID=A9BQD1_DELAS Length = 425 Score = 385 bits (989), Expect = e-105, Method: Compositional matrix adjust. Identities = 210/423 (49%), Positives = 277/423 (65%), Gaps = 29/423 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR+LHTSDWHLGQ+F KSR+AEH A +DWLLE VDA+++AGD+FDTG+PPSYAR Sbjct: 1 MRLLHTSDWHLGQHFMGKSRQAEHAALIDWLLEQVDAQAVDAVLIAGDIFDTGAPPSYAR 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAG----HAPQI-L 115 LY++ VV L G L++L GNHDSVATL E+R+++A L+TTVVA+ G H ++ L Sbjct: 61 ELYSQLVVRLHAAGVALLLLGGNHDSVATLAENRELLACLDTTVVAAVGETASHVVELPL 120 Query: 116 PRRDG---TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLR 172 RR G PG ++C +PF+RPRD++ SQ G + +KQQ L AAI Y+ + DA R Sbjct: 121 RRRPGQPAAPGCIVCALPFMRPRDLVLSQPGQSAEQKQQALQAAIESCYRSVH-DAAMAR 179 Query: 173 GD-------QPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHR 225 D Q LPIIATGHLTTVGAS S++VR+IY+G+LDAFP FPPADY+ALGHIH+ Sbjct: 180 RDALAAASGQRLPIIATGHLTTVGASSSESVREIYVGSLDAFPTSAFPPADYVALGHIHQ 239 Query: 226 AQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGD 285 Q +GG+EH+RY GSPI LSFDE +SK + LV L++V L VP QPMA + G Sbjct: 240 PQKVGGLEHIRYSGSPIALSFDEARQSKQMLLVDLGPEGLQAVTPLPVPCFQPMASVAG- 298 Query: 286 LASITAQLEQWRDVSQEP----PVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRS 341 S+TA + R +Q VWL++ + D+YL + ++QAL + LPVE+L VRR Sbjct: 299 --SLTALPDLMRAAAQAGSPARSVWLEVVVEQDDYLPQLTDRVQALADELPVELLRVRRQ 356 Query: 342 REQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTL------A 395 R + +A+ E+L E+S +VF RRLALE L+ Q L + + L A Sbjct: 357 RGRAVAGMAAAAGESLHEISPADVFERRLALETLEPGLAQALTRRYQEVVAGLDAPQPGA 416 Query: 396 GEH 398 GEH Sbjct: 417 GEH 419 >UniRef50_A6VXU9 Nuclease SbcCD, D subunit n=2 Tax=Marinomonas RepID=A6VXU9_MARMS Length = 425 Score = 352 bits (903), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 185/421 (43%), Positives = 265/421 (62%), Gaps = 26/421 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLGQ+F KSR EH+AF+DWLL +DA+I+AGDVFDTGSPPSYAR Sbjct: 1 MKILHTSDWHLGQHFMGKSRRDEHKAFIDWLLALVDKESIDAVIIAGDVFDTGSPPSYAR 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGH---APQILPR 117 +Y++ V++++ C LV++AGNHDSV+ LNES+ ++ +L+T V + A ++P Sbjct: 61 EMYHQLVLDMKARQCQLVIVAGNHDSVSMLNESKSLLTYLDTQVSSQANLEDIESHVIPL 120 Query: 118 RD--GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRG-- 173 +D G A +C +P+LRP+D++ S AG + +K+ LL I D+YQ+ Y AC+ Sbjct: 121 KDKKGEVAAWVCAVPYLRPKDVMQSVAGQSEQDKKLSLLQMIGDFYQRVYEAACEKNKAL 180 Query: 174 DQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGME 233 P+PII TGHLT VG S++VRD+Y+GTL+A P FP DY+ALGHIHRAQ I Sbjct: 181 KTPVPIIGTGHLTAVGGQVSESVRDLYVGTLEALPTSVFPAFDYLALGHIHRAQPISKSG 240 Query: 234 HVRYCGSPIPLSFDECGKSKYVHLVTFSN---GKLESVENL-----------NVPVTQPM 279 RY GSPIPLSFDE G+ K LV F G+ VE+L +P QPM Sbjct: 241 RFRYSGSPIPLSFDELGRDKT--LVMFDTDLLGEDTFVEDLFAEPTDPVQLVTIPNFQPM 298 Query: 280 AVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVR 339 A LKG+L + Q+ +++++ +WL++ + DEYL D+ +++ + + P+E+L V Sbjct: 299 ASLKGNLKEVIKQISAL-ELAEDKTLWLEVTVIADEYLSDVHKRLLEVIDGKPIELLRVM 357 Query: 340 RSREQRERVLASQQRETLSELSVEEVFNRRLALE-ELDESQQQRLQHLFTTTLHTLAGEH 398 R ++ + + R+TLSEL+V +VF + L ELDE + + L LF T L L EH Sbjct: 358 RRSAVEKKNESFEARKTLSELTVGDVFQQSLKSNLELDEEESKMLTELFQTCLVELE-EH 416 Query: 399 E 399 + Sbjct: 417 Q 417 >UniRef50_A1SUG4 Exodeoxyribonuclease I subunit D n=2 Tax=Psychromonas RepID=A1SUG4_PSYIN Length = 408 Score = 328 bits (842), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 165/394 (41%), Positives = 243/394 (61%), Gaps = 8/394 (2%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLGQ F K+RE+EH FL+WL+E Q+DA+IVAGD+FD+ SPPSYAR Sbjct: 5 MKILHTSDWHLGQYFMMKTRESEHLHFLNWLIEVVNKQQIDALIVAGDIFDSASPPSYAR 64 Query: 61 TLYNRFVVNLQQTGC-HLVVLAGNHDSVATLNESRDIMAFLNTTVVASAG-----HAPQI 114 LY+ F+V LQ++ C L+++AGNHDS+A LNE++D++ L+ +V+A H ++ Sbjct: 65 KLYSDFIVRLQKSSCRQLIIMAGNHDSIAVLNENKDLLKALDVSVLAGLSDDLNEHIIEL 124 Query: 115 LPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGD 174 R T A++C +PFLR D++ S G + +KQ L I D YQ + A + Sbjct: 125 KDDRQNTQ-ALVCALPFLRAADVMRSVQGSSAADKQISLQQGIADTYQSIFELANAQCHE 183 Query: 175 QPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEH 234 + LPIIATGHLT VG S SD+VR+IYIGTL AFPA FP +YIALGH+HRAQ + +H Sbjct: 184 KALPIIATGHLTAVGCSVSDSVREIYIGTLTAFPAVLFPAFNYIALGHLHRAQKVQKTDH 243 Query: 235 VRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLE 294 +RYCGSPI LSFDE + K ++++ F +V +PV Q M V+ GDL S+ QL+ Sbjct: 244 IRYCGSPIALSFDETRQQKNINIIEFDTNNALTVNETVIPVFQRMQVISGDLESVIEQLQ 303 Query: 295 QWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQR 354 + + W+++++ YL D+ + + +E+L + + + + Sbjct: 304 ELKKELAGESAWIEVKLKQAFYLSDVHALLNEQVQESQIEILKISSPTINEKNQYQAADK 363 Query: 355 ETLSELSVEEVFNRRLALEE-LDESQQQRLQHLF 387 TL L+ ++F RL +E+ + Q+++L LF Sbjct: 364 STLDNLTPADLFQHRLQIEDSYSDQQREQLTKLF 397 >UniRef50_UPI0000E0E5D5 exonuclease subunit SbcD n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0E5D5 Length = 471 Score = 308 bits (788), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 173/413 (41%), Positives = 241/413 (58%), Gaps = 22/413 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M I+HTSDWHLGQ+F ++SR+AEHQ FLDWLL Q H +DA+IVAGD+FDT SPPSYAR Sbjct: 1 MNIIHTSDWHLGQSFINQSRQAEHQQFLDWLLTQVQAHAIDAVIVAGDIFDTTSPPSYAR 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP-----QIL 115 +Y+ F+ + +T C LV+L GNHDSVA LNES + LNT ++ ++ P I Sbjct: 61 EMYHEFIGQIFKTDCTLVILGGNHDSVAVLNESLPLFKSLNTHMIPNSLSDPADQVVTIP 120 Query: 116 PRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQ 175 R+ G GA++C IPFLR RD++ + G +KQ L AITD+Y+ YA A R Sbjct: 121 DRKTGAVGAIVCAIPFLRQRDLVVTHTGEGDEDKQARLKHAITDHYEAVYAAAVAKRDAL 180 Query: 176 PL--PIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGME 233 L PIIATGHLT VGA S++ RDIY+G L+ +P + FPPADYIALGHIHR Q + Sbjct: 181 GLSVPIIATGHLTAVGAKVSESERDIYVGNLENYPKEAFPPADYIALGHIHRPQAVSASR 240 Query: 234 HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVEN-----------LNVPVTQPMAVL 282 H+ Y GSPI LSFDE +K V ++F+ + N L +P Q M VL Sbjct: 241 HIYYSGSPIYLSFDELSYTKRVIKLSFNEHADSTHPNDQPAFTPQLTSLEIPCFQAMQVL 300 Query: 283 KGDLASITAQLEQWRDVSQE---PPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVR 339 G ++ I A ++ + E P W+ ++I + ++ I + V + + Sbjct: 301 SGSVSEIIADIQSFPLCPPEDKSPMTWVMVKINDPAFQGNVANTINEAAKGRAVVITKIM 360 Query: 340 RSREQRERVLASQQRETLSELSVEEVFNRRLALEEL-DESQQQRLQHLFTTTL 391 R R+ + L+SQ +E L +L+ +VF +R+ + D LQ L+ T + Sbjct: 361 RERDHSRQSLSSQDQENLDDLTPMDVFAKRIERAPVADHIDANALQQLYRTVV 413 >UniRef50_Q3JD79 Exodeoxyribonuclease I subunit D n=11 Tax=Bacteria RepID=Q3JD79_NITOC Length = 418 Score = 268 bits (684), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 152/414 (36%), Positives = 242/414 (58%), Gaps = 24/414 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR+LHTSDWH+G+ Y + R E +AFL+WL ET Q H++DA++VAGDVFDT +P A+ Sbjct: 1 MRVLHTSDWHIGRTLYGRKRYEEFEAFLNWLAETIQQHEIDALLVAGDVFDTSTPSHRAQ 60 Query: 61 TLYNRFVVNLQQTGC-HLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ----IL 115 LY RF+ + + C H++V+AGNHDS + LN ++++ L+ VV S + +L Sbjct: 61 ELYYRFLCWVAASSCRHVIVVAGNHDSPSFLNAPKELLKALDVHVVGSTTSDLEEEVLVL 120 Query: 116 PRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLR--- 172 P ++C +P+LR RDI ++AG + +K++ L+ I +Y A A + R Sbjct: 121 RNEQDAPELIVCAVPYLRDRDIRVAEAGESVEDKERKLIDGIRTHYAAVAALAEQKREEL 180 Query: 173 -GDQPLPIIATGHLTTVGAS--KSDAVRDIYIGTLDAFPAQNFPPA-DYIALGHIHRAQI 228 GD +PI+A GHL T G D VR++Y+G+L A+ FP + DY+ALGH+H Q Sbjct: 181 GGD--IPIVAMGHLFTAGGQTVDGDGVRELYVGSLAHVTAEVFPASFDYLALGHLHVPQK 238 Query: 229 IGGMEHVRYCGSPIPLSFDECGKSKYVHLVTF----SNGKLESVENLNVPVTQPMAVLKG 284 + G E +RY GSP+P+ F E + K V V F + + SV+ ++VPV Q + +KG Sbjct: 239 VKGSETMRYSGSPLPMGFGEAKQQKSVCRVAFDPIEGHSRAASVQLIDVPVFQKLERIKG 298 Query: 285 DLASITAQLEQWRDVSQEPP----VWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRR 340 D I+++L + + PP +WL++ DE + D++ +++A P+E+L ++ Sbjct: 299 DWGGISSRLLELSAMG--PPNGLRIWLEVIYEGDEVVGDLRERLEAAIAGTPMEILRIKN 356 Query: 341 SREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTL 394 +R + ETL +L+V +VF R LA+ E+ E Q+ L ++ TL +L Sbjct: 357 NRIIDRMLGQIHAEETLDDLNVNDVFERCLAIHEVPEDQRPELLRVYRETLSSL 410 >UniRef50_C8NB09 Nuclease sbcCD subunit D (Fragment) n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NB09_9GAMM Length = 412 Score = 256 bits (654), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 157/402 (39%), Positives = 225/402 (55%), Gaps = 13/402 (3%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 +++LHT+D HLG++ Y + R E AFLDWL +DA+++AGD+FDT +P ++ Sbjct: 10 LKLLHTADIHLGRHLYGRRRHHEFAAFLDWLAAILDAEHIDALVIAGDIFDTATPSPRSQ 69 Query: 61 TLYNRFVVNLQQTGC-HLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ---ILP 116 Y +F+ + C H+++ AGNHDS A L+ RDI+ LN V+ +A +L Sbjct: 70 AQYYQFLCRIAAGNCRHVIITAGNHDSPAFLDAPRDILRALNVHVIGAAREPADEVLLLR 129 Query: 117 RRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQ- 175 RDG P A++C +P+LR RD+ T+ AG + EK LL I +Y A A LR Sbjct: 130 DRDGAPEAIICAVPYLRERDLRTADAGESLAEKAGKLLDGIRAHYTAAVAHAETLRAAHG 189 Query: 176 -PLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPA-DYIALGHIHRAQIIGGME 233 LP+IATGHL T G S+A D IGTL PA FP A DY+ALGHIH AQ + E Sbjct: 190 ADLPLIATGHLYTAGGQTSEA-HDHEIGTLAHVPASAFPAAIDYLALGHIHLAQRLDSNE 248 Query: 234 HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQL 293 RY GSP+P +F E ++K V LVTF G+ +V L VP Q A L+GDL ++ AQ+ Sbjct: 249 TRRYSGSPLPHTFAEAAQNKTVCLVTF-QGRSAAVRPLAVPDFQKRARLRGDLPALEAQI 307 Query: 294 EQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLA-SQ 352 + +WL+I + ++ ++ ALT P+E+L ++ R RERVL + Sbjct: 308 NELAATGDN--IWLEIHYEGEAVEGGLRDRLHALTADTPLEILRLKNER-IRERVLTQNT 364 Query: 353 QRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTL 394 ETL +L+ +VF R LA + Q+ L+ + L L Sbjct: 365 DSETLDDLNPLDVFERCLAAHHISADQRDALRQNYREILAGL 406 >UniRef50_Q2FMB7 Exodeoxyribonuclease I subunit D n=2 Tax=cellular organisms RepID=Q2FMB7_METHJ Length = 410 Score = 255 bits (651), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 142/397 (35%), Positives = 221/397 (55%), Gaps = 12/397 (3%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLG + R EH+ FL WLL VD +IVAGD+FDT +PP+ + Sbjct: 1 MKILHTSDWHLGNQICGRKRYDEHEQFLSWLLSLINREGVDILIVAGDIFDTTTPPNRSL 60 Query: 61 TLYNRFVVNLQQTGC-HLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ----IL 115 Y +F+ + C +++ AGNHDS + + R++ +LN TVV P+ IL Sbjct: 61 EQYYQFLARAAGSSCRQIIITAGNHDSPSLIAAPRELCKYLNITVVGQVPDDPEELITIL 120 Query: 116 PRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQ 175 +DG P ++CP+P+LR RD+ T QAG + EK +L+ I Y + A K+R + Sbjct: 121 KDQDGRPELIICPVPYLRDRDVRTMQAGESAGEKAANLIEGIKARYHAIGSCAEKMREEM 180 Query: 176 P--LPIIATGHLTTVGA--SKSDAVRDIYIGTLDAFPAQNFPPA-DYIALGHIHRAQIIG 230 +PIIATGHL G + D RD+Y+GTL + A FP DY+ALGH+H Q + Sbjct: 181 GDFIPIIATGHLFAAGGITREDDGCRDLYLGTLASVGADAFPSCIDYLALGHLHLPQRVC 240 Query: 231 GMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASIT 290 G + +RY G+P+P+ F E G++K V ++ + + SV+ + VPV Q + + G + Sbjct: 241 GNDRMRYSGAPLPMGFGEAGQTKSVLMLDVQDSRNMSVKEIPVPVFQQLRRISGAFEEVL 300 Query: 291 AQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLA 350 +L + + + P +++ + + D +I+ + PVEVL V+ R + + Sbjct: 301 KELGRLK--MEYSPALVEVILEDPRIIPDASERIRTTIQGSPVEVLKVKAQRISAQAMQP 358 Query: 351 SQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLF 387 + E+L+ LS EEVF+RRL E+ + ++Q L F Sbjct: 359 ERAEESLAGLSPEEVFHRRLDAAEIPKEERQELLESF 395 >UniRef50_Q2LRF1 Exonuclease n=8 Tax=Bacteria RepID=Q2LRF1_SYNAS Length = 414 Score = 255 bits (651), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 144/405 (35%), Positives = 226/405 (55%), Gaps = 15/405 (3%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M++LHTSDWHLG+ + + R AEHQAFL+WL +T +D ++VAGDVFD +P + A+ Sbjct: 1 MKLLHTSDWHLGRALHGRKRYAEHQAFLEWLAALIETEDIDVLLVAGDVFDNSTPGNVAQ 60 Query: 61 TLYNRFVVNLQQTG-CHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ----IL 115 LY RF+ + + H+V+ AGNHDS + LN D++ FLN VV A +P+ + Sbjct: 61 ELYYRFLCRVAASSRRHVVITAGNHDSPSFLNAPGDLLKFLNIHVVGCACPSPEEELVTI 120 Query: 116 PRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQ 175 DG P ++C +P+LR RDI T++AG + +K++ ++ I D+Y++ Y DA + + + Sbjct: 121 AGADGEPRLIVCAVPYLRDRDIRTAEAGESVEDKERKIIEGIRDHYRKVY-DAARRKNSR 179 Query: 176 ---PLPIIATGHLTTVGAS--KSDAVRDIYIGTLDAFPAQNFPP-ADYIALGHIHRAQII 229 P+PI+ GHL G D VR++YIGTL FPP DY+ALGH+H Q + Sbjct: 180 LKSPVPIVVMGHLYAAGGKTVDGDGVRELYIGTLLHVGTDVFPPDIDYVALGHLHIPQTV 239 Query: 230 GGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASI 289 G+ +RY GSP+P+ F E + K V LV F + E ++VP + + L+GD +I Sbjct: 240 SGLGRIRYSGSPLPIGFGEGTQEKSVMLVEFPCSTSRATE-ISVPRFRELMTLRGDWQTI 298 Query: 290 TAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVL 349 LE + S+ WL++ +E + +++ + +E+L VR +R + Sbjct: 299 VRNLEDLK--SRGSNAWLEVIYEGNEMIGNMRALLDETIAGTGMEILRVRNNRILEHALK 356 Query: 350 ASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTL 394 ETL +L +VF R L E+ E ++ L + L +L Sbjct: 357 RMTANETLEDLDTTDVFKRCLEAHEIPEEKRSALLDAYREILVSL 401 >UniRef50_D1Y745 Nuclease SbcCD, D subunit n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y745_9BACT Length = 404 Score = 244 bits (622), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 146/407 (35%), Positives = 218/407 (53%), Gaps = 22/407 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHTSDWHLG+ + R E + FLDWL +T + DA++VAGDVFD+ +PP +A+ Sbjct: 1 MRILHTSDWHLGRKLCGQERADEFRRFLDWLTDTLICERADALVVAGDVFDSYTPPLWAQ 60 Query: 61 TLYNRFVVNLQQTGCH-LVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQI----L 115 +LY RF+ L +T C V++AGNHDS A L+ R+++ L+ VV + P L Sbjct: 61 SLYYRFLTGLSRTPCRSAVIVAGNHDSAALLDSPRELLDRLDVHVVGAPAQDPGAEIFEL 120 Query: 116 PRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL---- 171 P G GA+ C +PFLR RD+ + +G E + A D + +HYAD C L Sbjct: 121 PDAQGKTGALCCAVPFLRSRDLCGAMSG----EDADAIARAELDGFAKHYADVCALAETR 176 Query: 172 RGDQPLPIIATGHLTTVGAS--KSDAVRDIYIGTLDAFPAQNFPP-ADYIALGHIHRAQI 228 R + +PI+A GH G + D VRD+ +G+L A P FP DY+ALGH+H Q Sbjct: 177 RAGRDVPIVALGHCFAAGGAVRDDDGVRDLAVGSLGAVPLSAFPENVDYLALGHLHMPQT 236 Query: 229 IGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLAS 288 GG E RY G+P+ + F E G+ K V +V F +G+ SV ++VPV Q + LKG Sbjct: 237 CGGRESRRYSGAPLCMGFGEAGQKKQVCVVDF-DGRAASVRAVDVPVWQEILRLKGSFDE 295 Query: 289 ITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALT-ESLPVEVLLVRRSREQRER 347 I A L + + VW++ + DE + +I+ LT + V++L V+ + Sbjct: 296 IAAALSELERSGRS--VWVEAD-CADEGARGLNDRIRELTGDGGAVKILRVKVADAGLAE 352 Query: 348 VLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTL 394 V S + + S EVF L+ +++ + + L + L + Sbjct: 353 VF-SGAGDLNEDWSPREVFRLYLSEHQIEGEEAEALTGAYLEALEAM 398 >UniRef50_B3EQD7 Nuclease SbcCD, D subunit n=1 Tax=Chlorobium phaeobacteroides BS1 RepID=B3EQD7_CHLPB Length = 498 Score = 239 bits (611), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 147/439 (33%), Positives = 229/439 (52%), Gaps = 74/439 (16%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLG++ Y + R E AFLDWL+ET + +D ++VAGDVFD+ +P + A+ Sbjct: 33 MKILHTSDWHLGRSLYGRKRYEEFSAFLDWLVETIEDEGIDVLLVAGDVFDSSTPGNRAQ 92 Query: 61 TLYNRFVVNLQQTGC-HLVVLAGNHDSVATLNESRDIMAFLNTTVVA------------- 106 LY RF+ + + C H+VV+AGNHDS + LN ++++ LN V+ Sbjct: 93 ELYYRFLCRVSNSCCRHIVVIAGNHDSPSFLNAPKELLRALNVHVIGAVTDALEDEVFVI 152 Query: 107 ------------SAGHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLL 154 ++G + A++C +P+LR +D+ T + G +K + L+ Sbjct: 153 DDFGSEKSDSGQTSGQLEFFHSKISDQKSAIICAVPYLRDKDVRTVEPGETIDDKNRKLV 212 Query: 155 AAITDYY--------QQHYA----------------DACKLRGDQ-PLPIIATGHLTTVG 189 I ++Y Q+ +A K++ Q P+PIIA GHL T G Sbjct: 213 EGIREHYARVVEIAEQKRHALLRQPAVRSQTSKIDTQKSKIQNHQSPIPIIAMGHLFTAG 272 Query: 190 AS--KSDAVRDIYIGTLDAFPAQNFPPA-DYIALGHIHRAQIIGGMEHVRYCGSPIPLSF 246 + D VR++Y+G+L + FPP+ DY+ALGH+H Q +GG EH+RY GSP+P+ F Sbjct: 273 GKTVEGDGVRELYVGSLAHVGKEVFPPSIDYVALGHLHVPQAVGGAEHIRYSGSPLPMGF 332 Query: 247 DECGKSKYVHLVTFSNGKLESVEN------------LNVPVTQPMAVLKGDLASITAQLE 294 E + K + +V F K ++ L VP QP+ + G L I A+LE Sbjct: 333 GEANQQKSMVIVEFGLEKAVKLQKSPLKNQKSKISLLPVPCFQPLVRITGSLEDIQARLE 392 Query: 295 QWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRR--SREQRERVLAS- 351 + + E WL+IE T E + +++ I+ E+L + VRR +R +RV+ S Sbjct: 393 ELK--KDESRAWLEIEYTGREIIGNLRESIE---ETLSDSSMEVRRIKNRMVMDRVIGSI 447 Query: 352 QQRETLSELSVEEVFNRRL 370 ++ E L +L +EVF R L Sbjct: 448 EEEEALDDLDAQEVFTRCL 466 >UniRef50_A5EW10 Exonuclease SbcD n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EW10_DICNV Length = 396 Score = 217 bits (553), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 138/409 (33%), Positives = 217/409 (53%), Gaps = 24/409 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILH++DWHLG + +SRE+E QAFLDW LET Q D +++AGD+FDT +PP A+ Sbjct: 1 MKILHSADWHLGAKLHGQSRESEQQAFLDWFLETLARVQPDILLLAGDIFDTATPPVSAQ 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ------- 113 Y F+ Q +V++AGNHDS A L+ + ++A + VV G APQ Sbjct: 61 RQYYHFLYQAAQQCDAIVIIAGNHDSAAFLDAPQALLANMQIYVV---GQAPQNAAEAVF 117 Query: 114 ILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL-R 172 L ++G A++ +PFLR RDI +Q G + +K + + YYQQ A KL R Sbjct: 118 ALETKNGR--AIVAAVPFLRERDIRCTQVGESLADKASAIADGVRQYYQQAAEQAQKLRR 175 Query: 173 GDQPLPIIATGHLTTVGASKS--DAVRDIYIGTLDAFPAQNFPPA-DYIALGHIHRAQII 229 G +PL IA GHL G + D VRD+++G L A FP DY+ALGH+H Q++ Sbjct: 176 GSEPL--IALGHLFAAGGKTTDHDGVRDLFVGKLGHLSATIFPQCFDYVALGHLHLPQMV 233 Query: 230 GGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASI 289 +RY G+P+ + F E K++ + F + ++ + VPV Q + L+G ++ Sbjct: 234 AQNPRIRYSGAPLMMGFGESVSEKHIVQLHFHE-RQPIIDAITVPVWQKLRQLRGRQETV 292 Query: 290 TAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVL 349 A++E ++ E VWL+I I + + ++Q L + V++L +++ Q Sbjct: 293 IAEIEAL--LNDEAAVWLEIIIEEGVFDSALNARLQDLVANTSVKILRIQQPSTQDFVAA 350 Query: 350 ASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEH 398 S R+ +EVF +RL ++ ++ +L F T L + H Sbjct: 351 LSDTRQLYEP---QEVFAQRLEKTPFNDVEKAQLTADFLTILQQVHDAH 396 >UniRef50_C1TLY0 Exonuclease SbcD n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TLY0_9BACT Length = 404 Score = 210 bits (534), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 131/398 (32%), Positives = 205/398 (51%), Gaps = 10/398 (2%) Query: 3 ILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYARTL 62 +LHTSDWHLG++ + R E FLDWL VD ++VAGDVFDTG+P S + L Sbjct: 1 MLHTSDWHLGKSLCGRRRTEEQAEFLDWLAGLILRESVDLLLVAGDVFDTGTPGSGVQRL 60 Query: 63 YNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDGTP 122 Y RF+ ++ ++GC +VV+AGNHDS + L+ DI+ ++N V+ A +++ DG Sbjct: 61 YYRFLCSVAESGCSVVVVAGNHDSPSLLDAPSDILGYMNVFVLGVADPEREVVSIVDGDG 120 Query: 123 G--AVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQP-LPI 179 A++ +P+LR RDI S + +++ + L + ++Y + + K P +P Sbjct: 121 EVIALVGAVPYLRERDIRRSSWSDDPMDRDRALALGVEEHYSRIFETMRKKSESSPGVPR 180 Query: 180 IATGHLTTVGA--SKSDAVRDIYIGTLDAFPAQNFPP-ADYIALGHIHRAQIIGGMEHVR 236 IA GHL G D RD+Y+G L FP DY+ALGHIH AQI+GG E R Sbjct: 181 IAMGHLFAAGGKVKDDDGSRDLYVGGLGRVGTDIFPDWLDYVALGHIHGAQIVGGRERCR 240 Query: 237 YCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQW 296 Y GSP+PL F E G K V+LV G S + VP + LKG+ +++ L + Sbjct: 241 YSGSPMPLGFGESGMEKSVYLVDL-EGPDFSCRAVPVPSRTEVISLKGNRHALSEGLSEL 299 Query: 297 RDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRET 356 V + P ++ + D ++ ++++ + VE+L V+ + + Sbjct: 300 VLVGR--PCLVEAVLCDDVPFSSLREDLESIVDGSSVELLRVKDGTGINGN-WSFEVSGG 356 Query: 357 LSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTL 394 L ++ E+VF RRL L + + +F L + Sbjct: 357 LESMTEEDVFLRRLEGVSLKQDVRDIYVAMFREVLQDI 394 >UniRef50_A5WEF9 Nuclease SbcCD, D subunit n=3 Tax=Psychrobacter RepID=A5WEF9_PSYWF Length = 537 Score = 208 bits (530), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 117/274 (42%), Positives = 168/274 (61%), Gaps = 14/274 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 + ILHTSDWHLG+ Y + R E +AFL WL +T Q +QVD +IVAGDVFDT +P + A+ Sbjct: 14 LTILHTSDWHLGRRLYGQLRYHEFEAFLAWLTQTLQQYQVDVLIVAGDVFDTMTPSNKAQ 73 Query: 61 TLYNRFVVNLQQTGC-HLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGH--APQILPR 117 LY F+ + ++ C H+VV+AGNHDS L+ +++ LN V+ +A A ++L Sbjct: 74 ALYYEFLGVVSKSHCDHVVVVAGNHDSPTFLDAPANVLKALNVHVIGTACEDVADEVLVL 133 Query: 118 RDGTPGA--VLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYY----QQHYADACKL 171 D A ++ +P+LR RD+ ++QAG +G +K +LLA I ++Y Q A KL Sbjct: 134 TDSQDQAQCIIAAVPYLRDRDVRSAQAGESGADKDANLLAGIHEHYAKVAQVAKAKQAKL 193 Query: 172 RGDQP--LPIIATGHLTTVGASKS--DAVRDIYIGTLDAFPAQNFPPA-DYIALGHIHRA 226 Q +P+IATGHL G + + D VR++Y+G+L A F DY+ALGH+H Sbjct: 194 ITQQQRHIPLIATGHLFAAGGATTADDGVRELYVGSLGKISADMFDECFDYVALGHLHVP 253 Query: 227 QIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTF 260 Q +GG EH+RY GSPI + F E ++K V LV F Sbjct: 254 QKVGGREHIRYSGSPIAMGFGEANQTKQVLLVQF 287 Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 41/149 (27%), Positives = 78/149 (52%), Gaps = 8/149 (5%) Query: 247 DECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVSQEPPVW 306 DE +K +H+ + ++ +V VP Q + + GD+ I L+Q ++ P+W Sbjct: 388 DEALAAKTLHITADNTMQIIAV---TVPCFQQLLPISGDINHILQSLQQ---LAHTKPIW 441 Query: 307 LDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQ-RETLSELSVEEV 365 +++ T DE + D++ +I A P EVL + ++ + R +VL +Q ETL +L +V Sbjct: 442 IEVAYTGDEIVSDLREQIHAAVAGTPFEVLKI-KNHQVRNKVLKAQSTHETLQDLDEMQV 500 Query: 366 FNRRLALEELDESQQQRLQHLFTTTLHTL 394 F R L ++ ESQ+ L+ + ++ + Sbjct: 501 FERCLVANKVAESQRPSLREAYAQIVYQI 529 >UniRef50_C8PYK6 Nuclease SbcCD, D subunit n=2 Tax=Pseudomonadales RepID=C8PYK6_9GAMM Length = 507 Score = 204 bits (518), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 106/275 (38%), Positives = 161/275 (58%), Gaps = 16/275 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 + +LHTSDWHLG+ Y K R E + FLDW L+T + +VD +++AGD+FDT +P + A+ Sbjct: 2 LTLLHTSDWHLGRRLYGKPRYDEFKQFLDWQLQTLREQKVDVLLIAGDIFDTTAPSNQAQ 61 Query: 61 TLYNRFVVNLQQTGC-HLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ----IL 115 LY F+ + T C H++++AGNHDS + L + ++ N ++ S P L Sbjct: 62 NLYYDFLSQVCHTDCRHVIIVAGNHDSASFLEAPKQLLKAFNIHIIGSMTDTPTDEVITL 121 Query: 116 PRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYAD-------A 168 + G P ++ +P+LR RD+ T G +K++ L I +Y Q AD Sbjct: 122 LDKSGQPELIVMAVPYLRDRDVRTVGHGERLDDKERKLAQGIKAHYAQ-IADIAIAQQAQ 180 Query: 169 CKLRGDQPLPIIATGHLTTVGAS--KSDAVRDIYIGTLDAFPAQNF-PPADYIALGHIHR 225 + + + +PI+ATGHL TVG + D VRD+Y+G+L + A+ F P DY+ALGH+H Sbjct: 181 LQAKYKRIIPIVATGHLFTVGGQTMEGDGVRDLYVGSLGSIGAEIFHPQIDYVALGHLHI 240 Query: 226 AQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTF 260 Q++GG H+RY GSPI + F E + K VHL+ F Sbjct: 241 PQVVGGQPHIRYAGSPIAMGFGESRQQKQVHLLRF 275 Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 73/130 (56%), Gaps = 4/130 (3%) Query: 268 VENLNVPVTQPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQAL 327 +++L VPV QP+ LKGD +I L + Q VWL++ E + D+ KI L Sbjct: 378 LQSLPVPVFQPIQTLKGDWQTIKTSLHSLKKAQQS--VWLEVVYDGQEVVGDLSEKIAEL 435 Query: 328 TESLPVEVLLVRRSREQRERVLASQQR-ETLSELSVEEVFNRRLALEELDESQQQRLQHL 386 + +EVL ++ ++++R++V+ SQ+ E+L EL+ +VF R L ++ E Q+ L Sbjct: 436 VKDSRLEVLRIK-NQQKRDQVMQSQRMDESLEELNPTQVFERCLIAHQVLEEQKPMLWSR 494 Query: 387 FTTTLHTLAG 396 +T L +L G Sbjct: 495 YTEVLESLQG 504 >UniRef50_A4BZB7 Exonuclease SbcD n=2 Tax=Flavobacteriaceae RepID=A4BZB7_9FLAO Length = 400 Score = 195 bits (496), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 124/402 (30%), Positives = 196/402 (48%), Gaps = 7/402 (1%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHT+DWHLG S+ E FL W+ + +D ++++GD+FDTG+P + Sbjct: 1 MKILHTADWHLGHRLLEHSQLEEQTLFLSWIESYIIENNIDVLLISGDIFDTGTPSHQSL 60 Query: 61 TLYNRFVVNLQQTGCHLVVL-AGNHDSVATLNESRDIMAFLNTTVVASAGHA--PQILPR 117 +Y F+V L+ T C VV+ GNHDS TLN + ++ L+ VV A ++ Sbjct: 61 GMYYNFLVQLKATTCKSVVITGGNHDSPGTLNAPKQLLDALSIKVVGKATEKIEDEVFEI 120 Query: 118 RDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPL 177 ++ +P+LR DI + AG + E A+ ++Y A C+ Sbjct: 121 EVLGEKVIVGAVPYLRDGDIRRAVAGESFDELTDKYKTALINHYHAS-AKQCEKINTSKA 179 Query: 178 PIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPA-DYIALGHIHRAQIIGGMEHVR 236 P+IA GHL G S SD+ ++IY+GTL A++FP DYIALGH+HR QIIGG VR Sbjct: 180 PVIAMGHLFATGGSVSDSEQNIYVGTLGHIGAEDFPTYFDYIALGHLHRPQIIGGNAKVR 239 Query: 237 YCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQ- 295 Y GSP LSF E K V ++T N + +++ +P + L G + T Q Sbjct: 240 YSGSPNILSFSEIDYDKKVIILTIENNTITTIKEGVIPCFREFYRLTGTVVECTDQFPNI 299 Query: 296 WRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRE 355 ++ Q P W++I + D ++ K A S + + R+ + + + Sbjct: 300 ISNLYQLTP-WVEIVLNEDRSVNTDSLKEMAKNHSFEILKTSFKNQRKTKGIEELLENAK 358 Query: 356 TLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGE 397 ++ EL EVF + D +Q ++ F L ++ + Sbjct: 359 SIKELVPTEVFRLKCKEMGFDLEEQPKIWDAFNEILQSVKSQ 400 >UniRef50_C9M6Q6 Nuclease SbcCD, D subunit n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M6Q6_9BACT Length = 400 Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 119/401 (29%), Positives = 201/401 (50%), Gaps = 14/401 (3%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLG+ + + ++F WL+ + +VDA++V+GDVFD+ +PP +A+ Sbjct: 1 MKILHTSDWHLGKRLFGHNLREASESFCSWLVGLLEAERVDALLVSGDVFDSSTPPLWAQ 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNES----RDIMAFLNTTVVASAGHAPQILP 116 Y ++ ++ +VV +GNHDS L + R++ F+ ++ Sbjct: 61 RCYFDVLLKARELCRAVVVTSGNHDSAEFLEITGIPLRELGIFVFGRPAEDLTEQVVMVQ 120 Query: 117 RRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEK-QQHLLAAITDYYQQHYADACKLRGDQ 175 P ++ PFL D+ + L IE ++ + + YA A + + Sbjct: 121 NASSEPVGLVAAQPFLHESDLHRGSS-LEDIEALREETYRCAQSRFAELYA-ASRALNPE 178 Query: 176 PLPIIATGHLTTVGA--SKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGME 233 LP++ HL VGA + D +RD+ IG LDAF + DY+ALGH+HRAQ + G E Sbjct: 179 RLPVVCMAHLFAVGAKVGEGDGMRDLAIGGLDAFDCRALAGFDYVALGHVHRAQNVVG-E 237 Query: 234 HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQL 293 VRY GSP+ L F + G K + +V S G+ V + VP +A L G A I +L Sbjct: 238 AVRYSGSPLALGFGDAGAVKTLSIVDVSAGETPIVREIPVPPFVKLARLSGSFAEILERL 297 Query: 294 EQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQ 353 + ++ PVW+++ ++ D+ + Q + PVE+L V + + + Q Sbjct: 298 AEL--TAKGEPVWVELTLSEPSRGRDLWSEFQQTAQDSPVEILCVHVPDDPAATLASCPQ 355 Query: 354 RETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTL 394 + L E+S EVF + + ++ ++++ L+ LF + L Sbjct: 356 Q--LEEMSPTEVFRKLMEETGVESARRESLETLFNRFVQEL 394 >UniRef50_C7PNA9 Nuclease SbcCD, D subunit n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PNA9_CHIPD Length = 414 Score = 181 bits (458), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 117/311 (37%), Positives = 164/311 (52%), Gaps = 26/311 (8%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHT+DWH+GQ FY R EHQ FL WL++T + H V+ +I++GDVFD +P + A Sbjct: 1 MKILHTADWHIGQTFYQYDRTYEHQQFLHWLVDTIKAHDVELLIISGDVFDIANPSAVAI 60 Query: 61 TLYNRFVVNL--QQTGCHLVVLAGNHDSVATLN------ESRD--IMAFLNTTVVASAGH 110 L+ F+ + Q G ++V AGNHDS A L ES D I+ + S + Sbjct: 61 KLFYAFLNSAVKAQPGLQIIVTAGNHDSAARLEAPKPLLESSDIHIVGLIERKEDGSINY 120 Query: 111 APQILPRRDGTPGAVL--CPIPFLRPRDIITSQAGLNGIEKQQHLLA-AITDYYQQHYAD 167 ++P RD VL IPFLR D + + + L A ++ Y++ Y Sbjct: 121 EKMLIPVRDRNGETVLWCMAIPFLRMGD-------YPAVAESETLYADGVSALYKEAYEH 173 Query: 168 A-CKLRGDQPLPIIATGHLTTVGASKSDAVRD--IYIGTLDAFPAQNF-PPADYIALGHI 223 A K +G Q IIA HL T+ A SD + + +G ++ PA+ F Y+ALGHI Sbjct: 174 ALTKKQGGQ--GIIAMAHLHTLDAELSDHDKSERVIMGGIEFVPAKAFHEELLYVALGHI 231 Query: 224 HRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLK 283 H+AQ IGG EH+RY GSP+P+SF E V SNG + +E L +PVT + + Sbjct: 232 HKAQKIGGKEHIRYSGSPLPMSFSEMNYKHQVVSFDISNGVMSGLEMLEIPVTTELLRVP 291 Query: 284 GDLASITAQLE 294 I A LE Sbjct: 292 AKPQPIEAVLE 302 >UniRef50_A6DE84 Nuclease SbcCD, D subunit n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DE84_9PROT Length = 362 Score = 180 bits (456), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 113/392 (28%), Positives = 208/392 (53%), Gaps = 40/392 (10%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M++LHTSDWHLG F+ R+ E + LD++++T + +VD +++AGD+FD P A Sbjct: 1 MKVLHTSDWHLGNKFFGYDRDDEFELVLDFIIKTIKKEKVDVLLIAGDIFDVYYPSQSAL 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 +Y F++ ++ H+ ++AGNHDS++TL+ +DI+ L+ V++ + ++ Sbjct: 61 KVYYSFLMKVKPYLKHIFIIAGNHDSISTLSAPKDILNALDIKVISGDENVEDMIV---- 116 Query: 121 TPGAV-LCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 G V +P+LR + L K +L+ IT +Y++ + + + Sbjct: 117 NVGDVDFLLVPYLR-------EILLREKYKNDNLIENITHFYKEIISKSNNKK------- 162 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCG 239 I TGHLT + + KS + +DIYIG ++ A+ F ADY+ LGH+HR Q I ++V Y G Sbjct: 163 ILTGHLTALNSKKSGSEKDIYIGKIEGVSAEIFDGADYVGLGHLHRYQEIK--KNVVYSG 220 Query: 240 SPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDV 299 S + +SFDE K V + T K + +++P+ + + + GD +I +LE+ ++ Sbjct: 221 SILKMSFDENDDKKLVIIDTDDFSK----KVVDIPIFRQIKTISGDKKTIKNELEKI-NL 275 Query: 300 SQEPPVWLDIEITTDEYLHDIQRKIQALTESLP-VEVLLVRRSREQRERVLASQQRETLS 358 S+ +E+ DE + + + ++ L + +E++ +E +E +T+ Sbjct: 276 SKLKAF---VELIFDETIDNTE--VEELKKEFDNIEIIKYSYKKESKE----INFEKTIK 326 Query: 359 ELSV----EEVFNRRLALEELDESQQQRLQHL 386 ++S+ EE+F + EEL + Q L+ L Sbjct: 327 DISINAIFEEIFKDSINFEELKDEFMQILEGL 358 >UniRef50_Q1DDQ4 Nuclease SbcCD, D subunit n=3 Tax=Myxococcales RepID=Q1DDQ4_MYXXD Length = 414 Score = 177 bits (450), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 119/311 (38%), Positives = 157/311 (50%), Gaps = 24/311 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR+LHTSDWHLG Y SR+AEH AFLDWLLET + VDA++VAGD+FDT +P + A+ Sbjct: 1 MRLLHTSDWHLGHTLYDVSRDAEHAAFLDWLLETLEAQSVDALLVAGDIFDTANPSAEAQ 60 Query: 61 TLYNRFVVNLQQTGCHL--VVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ----- 113 + +FV ++ L VV+ GNHDS A L+ + A L VV A Sbjct: 61 AAWYQFVAKARRRMPRLDVVVIGGNHDSAARLDAPDPLFAALGVHVVGGLPRARGAMDQE 120 Query: 114 --ILPRRD--GTPGAVLCPIPFLRPRDI--ITSQAGLNGIEKQQHLLAAITDYYQQHYAD 167 ++P D G GA + +P+LRP D+ + G +E + + A + ++ Sbjct: 121 RLLVPLHDAKGRVGAWVAAVPYLRPADLPPVPGDMGDRLVEGVRSVYAEVLAAARRRRQA 180 Query: 168 ACKLRGDQPLPIIATGHLTTVGASKSD-AVRDIYIGTLDAFPAQNFP-PADYIALGHIHR 225 L +A GH G S + R I G A P FP Y ALGH+H+ Sbjct: 181 GQAL--------VAMGHCYMTGTELSALSERKILGGNQHALPVDLFPDDVAYAALGHLHK 232 Query: 226 AQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMA-VLKG 284 AQ +GG E VRY GSP+PLS E G V LV L V++L VP T M V Sbjct: 233 AQRVGGREGVRYSGSPLPLSLSEAGYRHQVLLVELEGDALREVQSLPVPRTTDMVRVPSR 292 Query: 285 DLASITAQLEQ 295 D A + A L Q Sbjct: 293 DAAPLDAVLTQ 303 >UniRef50_A4VHU4 Exonuclease SbcD n=22 Tax=Gammaproteobacteria RepID=A4VHU4_PSEU5 Length = 468 Score = 177 bits (448), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 121/385 (31%), Positives = 191/385 (49%), Gaps = 25/385 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR++HTSDWHLGQ +S+ R+ EH FL WLL+ H+ DA+++AGDVFDT +PP A+ Sbjct: 58 MRLIHTSDWHLGQTLHSQDRDHEHAQFLAWLLDQLVAHRADALLIAGDVFDTVNPPLKAQ 117 Query: 61 TLYNRFVVNLQQTGCHL--VVLAGNHDSVATLNESRDIMAFLNTTVVASAG--------H 110 F+V + L V++AGNHDS + +M LN V H Sbjct: 118 EHLYDFIVRAHEKLPQLDIVMIAGNHDSGGRIELPAPLMKRLNAHAVGRISWVAEGQLDH 177 Query: 111 APQILPRRD--GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADA 168 ++P D G A +PFLRP ++ G+ +A I +++ A A Sbjct: 178 QRLLVPLHDAAGNTAAWCLTLPFLRPAEV-------TGMALGDDYMAGIRQVHERLIAAA 230 Query: 169 CKLR-GDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPA-DYIALGHIHRA 226 +R Q L ++ H+ GA ++ R+I IG +A PA FP + Y+ALGH+H+ Sbjct: 231 EAVRQPGQALVAMSHAHMAG-GAVSEESERNIVIGNAEALPASLFPESVAYVALGHLHKP 289 Query: 227 QIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVP-VTQPMAVLKGD 285 Q + G +RY GSP+PLSF E V LV L+ V++L VP + + + + Sbjct: 290 QQVAGQARIRYSGSPLPLSFAEVNYPHQVLLVELDGEALKQVDSLAVPRAVEMIRIGRAP 349 Query: 286 LASITAQLEQWRDVS--QEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSRE 343 LA + A LE E WL++ + DE L D++++I+ ++ + + Sbjct: 350 LAEVIAALEALPPTGLFDEHLPWLEVRVLLDEPLPDLRQRIETAITGKACRLVRIASEYD 409 Query: 344 QRERVLASQQRETLSELSVEEVFNR 368 + S+ L +++ +E+F R Sbjct: 410 GKRGETESEVLLGLDQITPQELFAR 434 >UniRef50_Q1VZW8 Exonuclease SbcD n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=Q1VZW8_9FLAO Length = 403 Score = 174 bits (440), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 121/408 (29%), Positives = 207/408 (50%), Gaps = 24/408 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHT+DWH+G+ + K + F+DW+ + + +D ++V+GDVFD +P S +R Sbjct: 1 MRILHTADWHIGKKLHKKELYQDFDLFIDWMCQFLPENDIDILLVSGDVFDFSNPSSESR 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ-----IL 115 T Y R ++ L++ +++ GNHDS + L + I+ L+ V+ G P+ ++ Sbjct: 61 TQYYRTLIKLKKFDLKIIITGGNHDSPSVLEAPKAILNELDIHVI---GQRPENLQDCLI 117 Query: 116 P-RRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGD 174 P +D V+ +P+LR RD+ N KQ+ + +I ++Q+ + A K D Sbjct: 118 PIYKDENVDLVIAALPYLRNRDLQERFDAENHDSKQKAVQQSIAYHFQEAASLAKKKYPD 177 Query: 175 QPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNF-PPADYIALGHIHRAQIIGGME 233 +P++ GHL G S SD+ R+I IG L A +F YIALGHIH+ Q + + Sbjct: 178 --VPLLGMGHLFAKGVSLSDSEREIQIGNLAGLDASHFGSNYSYIALGHIHKPQRLNSLT 235 Query: 234 HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQL 293 + Y GSP PLSF E K + L+ S K E++++P + + ++KG L I +L Sbjct: 236 PIFYSGSPTPLSFSERKNEKRILLIDTS--KSFEPESISIPKFRDLILVKGSLEKIKQKL 293 Query: 294 EQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQ-----ALTESLPVEVLLVRRSREQRERV 348 + ++ P+ IEI +E + I+ E+ E++ R S + + Sbjct: 294 SEITNIH---PLQTLIEIEMEEENFSPSKTIELEEYIETFENEACEIVKHRVSFKYKPEG 350 Query: 349 L--ASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTL 394 L + E +S+ + EVF+++L + E+ ++ L F L L Sbjct: 351 LRGITSTEEQISDFTPLEVFHKKLESVDETETSKEELISAFEEILDEL 398 >UniRef50_Q3ICS5 Exonuclease sbcCD subunit D n=2 Tax=Alteromonadales RepID=Q3ICS5_PSEHT Length = 415 Score = 170 bits (431), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 114/377 (30%), Positives = 189/377 (50%), Gaps = 20/377 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M++LHTSDWHLGQ FY R EH AF WLL T Q+D ++VAGD++ T +P + A Sbjct: 1 MKVLHTSDWHLGQQFYEYDRRHEHLAFFTWLLATLVEQQIDLLLVAGDIYHTATPSASAE 60 Query: 61 TLYNRFVVNLQQT--GCHLVVLAGNHDSVATLNESRDIMAFLNTTVVA---SAGHAPQIL 115 +F+ + ++ H+V++AGNHDS + ++ ++A +T VV + A ++ Sbjct: 61 NQLYQFIKDAKKQCPNLHVVIIAGNHDSANRILAAQPLLAQFDTHVVGRFEATAAADTVI 120 Query: 116 PRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQ 175 AV+ +PFLR D+ T +G Q + Y+ A L+ + Sbjct: 121 TINTNKKRAVIVAMPFLRASDVTTLSQTKSGPSYAQ----GVKKAYELALEHAATLQSEN 176 Query: 176 PLPIIATGHLTTVGAS-KSDAVRDIYIGTLDAFPAQNF-PPADYIALGHIHRAQIIGGME 233 P+I GHL G SD+ R++ IG +A A F A Y+ALGH+H+AQ + E Sbjct: 177 T-PLIVMGHLHAKGGDISSDSERNLVIGGEEAISANVFGKQAHYVALGHLHKAQQVAKNE 235 Query: 234 HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLE----SVENLNVPVTQPMAVL-KGD--- 285 +RY G+PIP+SF E S V++V F++ + + +V L +P + VL KG+ Sbjct: 236 CIRYSGTPIPMSFSERNYSHQVNVVEFNSDEKQQISVTVNPLYIPRLADVIVLPKGECVP 295 Query: 286 LASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQR 345 LA + +++ + +L +++ + + + +I+ E + + R REQ Sbjct: 296 LAELCEEIKALDTTANTIAPYLRVKLKSSDTDTTFREQIEQALEGKHIRFCGIERVREQA 355 Query: 346 ERVLASQQRETLSELSV 362 E L+E+ + Sbjct: 356 ANNEGGAVFEDLTEVEM 372 >UniRef50_A6LCR3 Putative exonuclease n=6 Tax=Bacteroidales RepID=A6LCR3_PARD8 Length = 416 Score = 170 bits (430), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 129/398 (32%), Positives = 191/398 (47%), Gaps = 50/398 (12%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 ++++HT+DWHLGQ F+ REAEH+AFL +L + D +++AGDVFD +P + A+ Sbjct: 3 LKLIHTADWHLGQTFFGYDREAEHEAFLGFLTNLLVERETDVLLIAGDVFDVTNPSAGAQ 62 Query: 61 TLYNRFV--VNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGH-------- 110 + RF+ N G +V++AGNHDS L ++ LNT++V G Sbjct: 63 RRFYRFLREANRLNPGLQIVIIAGNHDSAIRLEAPNPLLEELNTSIVGIVGRTDSGEIDL 122 Query: 111 APQILPRRD--GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQ--HYA 166 A ++P R+ G A+ +PFLR D + G + +A I Y++ YA Sbjct: 123 ASLVVPLRNRAGEREALCLAVPFLRQGDYPAAPEG-----ELDSYVAGIGRMYRRLYAYA 177 Query: 167 DACKLRGDQPLPIIATGHLTTVGASKSDAVRD--IYIGTLDAFPAQNFPPA-DYIALGHI 223 DA + G+ I+A GHL GA SD R +G L++ A F Y ALGHI Sbjct: 178 DAQRNPGEA---IVALGHLHATGAELSDDDRSERAIMGGLESVSADTFDAGIAYTALGHI 234 Query: 224 HRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQ------ 277 H+AQ IGG E VRY GSP+P+SF E V V G + +E + +P Sbjct: 235 HKAQRIGGREAVRYAGSPLPMSFSEKNYRHQVIAVEIEEGSVTEIEAIGIPRVADLMRIP 294 Query: 278 -----PMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDE----YLHDIQR----KI 324 P VL+ LA + E D S+ P +L+I + E + H ++ K Sbjct: 295 DSPLPPKEVLRC-LAGLPEPEEGREDESRWP--YLEIRVLLTEPDPTFRHRVEEALVGKA 351 Query: 325 QALTESLPVEVLLVRRSREQRERVLASQQRETLSELSV 362 LT +P RR E ER L+ + ++ L + Sbjct: 352 VRLTSIVPS---YPRREGEAEERALSYNDLQKIAPLDM 386 >UniRef50_D0LY15 Nuclease SbcCD, D subunit n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LY15_HALO1 Length = 467 Score = 170 bits (430), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 138/433 (31%), Positives = 205/433 (47%), Gaps = 66/433 (15%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR+LHTSDWHLG + + SR+ EH+ FL WL++T + VDA+++ GD+FD+ +PP+ A+ Sbjct: 1 MRLLHTSDWHLGHSLHDVSRDYEHECFLRWLVDTLEAEAVDALLITGDIFDSANPPATAQ 60 Query: 61 TLYNRFV--VNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ----- 113 + +F+ V+ + G ++V+ GNHDS A L + +++ L T V+ + P+ Sbjct: 61 ASWYQFLAEVHARLPGLDVLVIGGNHDSAARLEAPKPVLSALRTHVIGALRRGPRDQHGR 120 Query: 114 --------ILP--RRDGTPGAVLCPIPFLR--------------------------PRDI 137 I+P RDG A++ +PFLR P D Sbjct: 121 RPLELERAIVPLRDRDGEVAAIVAAVPFLRTADLPRPRRASADATVASEVTDASDGPADS 180 Query: 138 ITSQAGLNGIE-KQQHLLAAITDYYQQHYADACKLRGDQPLPIIATGHLTTVGASKSD-A 195 S A E ++ L+ + Y + DA + R ++ATGH VG S + Sbjct: 181 GASDADAGDEELRRDPLIGGVRQVYAE-VLDAARARLQPGQALLATGHCYMVGTDISTLS 239 Query: 196 VRDIYIGTLDAFPAQNFPP-ADYIALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKY 254 R I G A P FP Y ALGH+H+AQ +GG E VRY GSPIPL+ DE Sbjct: 240 ERRILGGNQHALPVSIFPDDVAYAALGHLHKAQRVGGREGVRYAGSPIPLALDEARYRHQ 299 Query: 255 VHLVTFSNGKLESVENLNVPVTQPM--------AVLKGDLASITAQLEQWRDVSQEPPV- 305 V LV L V +L+VP T + A K A+I A L W +P Sbjct: 300 VLLVELEGPALAEVRSLSVPRTVDIVRIPKSGAASPKEVFAAIEA-LPAWTPGEGDPQKS 358 Query: 306 ----WLDIEITTDEYLHDIQRKIQ-ALTESLP--VEVLLVRRSREQRERVLASQQRETLS 358 +L++ + D+ ++ +++ L P ++ +VRR + A RE L Sbjct: 359 DTRPFLELSVAIDKPRAQLKGEVEDKLRGKWPRLAKLGVVRRG-DGAPLADALPTRE-LR 416 Query: 359 ELSVEEVFNRRLA 371 EL EEVF RR A Sbjct: 417 ELDPEEVFLRRYA 429 >UniRef50_Q5P494 Exonuclease SbcD n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P494_AZOSE Length = 426 Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 126/393 (32%), Positives = 186/393 (47%), Gaps = 29/393 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR+LHTSDWHLGQ+ + R EHQ FLDWLL T + D +++AGDVFD +P + A+ Sbjct: 1 MRLLHTSDWHLGQSLHDFDRTYEHQQFLDWLLALIATERPDVLLIAGDVFDNANPSAGAQ 60 Query: 61 TLYNRFVVNLQQTGCHL--VVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ----- 113 RF+ ++ HL V++AGNHDS L + + + VV P Sbjct: 61 HQLYRFLTAARERMPHLSIVIIAGNHDSPGRLEATSPFLELFDAAVVGHVHRRPDQSIDV 120 Query: 114 ---ILP--RRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADA 168 ++P R+GT A IPFLRP D+ + G + LA + + Y++ A A Sbjct: 121 ERLVVPLKNREGTVAAWCLAIPFLRPGDV--PRVDHEGEGEHDAYLAGVAELYRRALAVA 178 Query: 169 CKLRGDQP-LPIIATGHLTTVGASKSD-AVRDIYIGTLDAFPAQNFPPA-DYIALGHIHR 225 R QP I+A GH S+ + R I +G +A PA F A Y+ALGH+H Sbjct: 179 QSRR--QPGQAIVAMGHCHMAHGKLSELSERRIVVGGAEALPAGIFDAAIAYVALGHLHL 236 Query: 226 AQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGD 285 AQ +GG +H+RY GSP+P+SF E V V + + + VP + + + Sbjct: 237 AQAVGGRDHIRYSGSPLPMSFAELDYPHQVMCVELDGEAVAEIRPVRVPRSVELIRVPKT 296 Query: 286 LASITAQLEQWR----DVSQEPPV----WLDIEITTDEYLHDIQRKIQALTESLPVEVLL 337 ASI L V+ + P +L++ + D ++ +I+A PV + Sbjct: 297 HASIDEVLPLLEALDPGVAADGPAHAHPYLEVRVRLDAPEPGLRVRIEAALAGKPVRLAR 356 Query: 338 VRRSREQRERVLASQQRE--TLSELSVEEVFNR 368 + + R AS L L+ E VF R Sbjct: 357 IDPASSPRGDAPASSAMSLGDLERLAPETVFAR 389 >UniRef50_A3XL99 Exonuclease SbcD n=1 Tax=Leeuwenhoekiella blandensis MED217 RepID=A3XL99_9FLAO Length = 405 Score = 167 bits (423), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 117/400 (29%), Positives = 196/400 (49%), Gaps = 21/400 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHT+DWH+G+ + + + F+ WL+ Q ++ ++V+GDVFD +P + AR Sbjct: 1 MKILHTADWHIGKKLHKHYLYTDFERFISWLIAIIQEENIELVLVSGDVFDLANPSAEAR 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPR--- 117 Y + + L C L++ GNHDS + L+ R+I+ LN ++ G P+ L Sbjct: 61 KQYYKALKQLSNLNCKLIITGGNHDSPSMLDAPREILEALNVHIL---GGMPENLEDCLI 117 Query: 118 ----RDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRG 173 + V+ IPFLR DI +++G+ + + + I + Q A+ CK + Sbjct: 118 PVQGKQDNDKLVVAAIPFLRDGDIRAAESGVTYENRIEAIRKGIEAVFTQ-AAETCKQKF 176 Query: 174 DQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPA-DYIALGHIHRAQIIGGM 232 LP+IA GHL G S++ RDI IG AF A F Y+ALGHIH+ Q + Sbjct: 177 PG-LPVIAMGHLYAAGIEPSESERDIQIGNQAAFQASQFGEYFSYVALGHIHKPQRVSAA 235 Query: 233 EHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQ 292 Y GSP+PLSF E K V ++ S G +++ +P + + + GDL I ++ Sbjct: 236 IPAFYSGSPLPLSFSERTDEKRVLILNTSTGF--EPKSVAIPTFRKLNKVSGDLERIQSK 293 Query: 293 LEQWRDVSQEPPVWLDIEITTDEY-LHDIQRKIQALTESLPVEVLLVRRSREQRERVLAS 351 L Q E +++E+ + + H I + +TE + +V+ + R+ A+ Sbjct: 294 L-QTLTPEGELTNLIEVELIEENFDAHRIAQLDTLVTEFDTPGLEIVKHRATFKNRLKAT 352 Query: 352 QQ----RETLSELSVEEVFNRRLALEELDESQQQRLQHLF 387 + ++ L +L EVF + L DE + ++ F Sbjct: 353 GKLFDAQQHLEDLKPLEVFTKMLEQNSYDEETKTQVTLAF 392 >UniRef50_A7LRG6 Putative uncharacterized protein n=5 Tax=Bacteroides RepID=A7LRG6_BACOV Length = 417 Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 110/333 (33%), Positives = 165/333 (49%), Gaps = 25/333 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 +RILHT+DWHLGQ F+ R EH FL+WL E + ++DA+I+AGDVFD +P + ++ Sbjct: 2 IRILHTADWHLGQTFFGYDRTEEHGVFLNWLAEEIRQKEIDALIIAGDVFDVSNPSAASQ 61 Query: 61 TLYNRFV--VNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASA---------- 108 ++Y +F+ V + +V++AGNHDS A L ++ + T V Sbjct: 62 SMYYQFIYRVTAENPYLQIVIVAGNHDSAARLEAPLPLLQAMRTEVRGVVRKLEGGEIDY 121 Query: 109 GHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADA 168 H L R G + +PFLR D Q N + + + Y Q Sbjct: 122 DHLTVELKNRKGEVELLCMAVPFLRQGDYPAVQTEGNPYAE------GVRELYAQLLQRL 175 Query: 169 CKLRGDQPLPIIATGHLTTVGA--SKSDAVRDIYIGTLDAFPAQNFPPA-DYIALGHIHR 225 K R + I+A GHL G+ ++ D IG L+ + F Y ALGHIH+ Sbjct: 176 WKRRTENQ-AILAIGHLQATGSEIAEKDYSERTVIGGLECVSPETFSEQIAYTALGHIHK 234 Query: 226 AQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQP-MAVLKG 284 AQ + G E+VRY GSPIP+SF E V +VTF G +E L P P ++V G Sbjct: 235 AQRVSGRENVRYAGSPIPMSFAEKHYHHGVVMVTFDGGCAVDIERLECPKLIPLLSVPNG 294 Query: 285 DLASITAQLEQWRDVSQEPPV--WLDIEITTDE 315 + S A LE +++ + V +L++++ +E Sbjct: 295 EPVSPEAVLEALKELPETEAVAPYLEVKVLLEE 327 >UniRef50_C5CAA0 Exodeoxyribonuclease I subunit D n=4 Tax=Micrococcaceae RepID=C5CAA0_MICLC Length = 407 Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 129/411 (31%), Positives = 190/411 (46%), Gaps = 44/411 (10%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M +LHTSDWHLG++F+ + LD L+ T VDA+++AGDV+D PP+ A Sbjct: 1 MILLHTSDWHLGRSFHGTGLLEAQEEVLDALVATVTERGVDAVLLAGDVYDRALPPADAV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGH--APQILPRR 118 L +R + L G +V+ +GNHDS L +++A V A A P +LP Sbjct: 61 RLLDRTLTRLHAAGAQVVLTSGNHDSAVRLGFGGELLAAAGVHVRADAAELDRPVLLPEP 120 Query: 119 --DGTPGAVLC--PIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGD 174 DG G + IP+L PR Q G+E H A +T+ ++ +AD R + Sbjct: 121 GVDGGAGQTVAVYGIPYLEPR----HQGPAWGVEP--HHTAVLTEAVRRVHADLAARRAE 174 Query: 175 QPLPI--IATGHLTTVGASKSDAVRDI--------------YIGTLDAFPAQNFPPADYI 218 P P+ + HL G S++ RDI +GTL P F DY Sbjct: 175 TPGPVAGVVLAHLFAAGGHGSESERDIGEGEHVEPDAPPEMLVGTLGQVPVSVFEGLDYA 234 Query: 219 ALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQP 278 ALGH+H Q + EHVRY GSP+P SF E G K LV + G + VE ++ + Sbjct: 235 ALGHLHGRQRL--AEHVRYSGSPLPYSFSEAGHRKGGWLVHVTGGAVTGVEAVDWDAGRR 292 Query: 279 MAVLKGDLASITAQLE-QWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLL 337 +AVL G + + E W + W+ + +T DE +R ++ L P VL+ Sbjct: 293 LAVLSGPIEDLLESPEFAWAE-----QCWVQVTVTDDER---PERALERLKTRFP-SVLV 343 Query: 338 VRR----SREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQ 384 R R RER A R+ S+ ++ F + E++Q L+ Sbjct: 344 FRHEPAGGRRARERTYAQVLRQAPSDHALAVGFVDHVRQRPASEAEQDLLR 394 >UniRef50_C9KXE7 Nuclease SbcCD, D subunit n=10 Tax=Bacteroides RepID=C9KXE7_9BACE Length = 416 Score = 163 bits (413), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 101/294 (34%), Positives = 143/294 (48%), Gaps = 22/294 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 +RILHT+DWHLGQ F+ R EH+AFLDWL ++DA+I+AGDVFD +P + ++ Sbjct: 2 IRILHTADWHLGQTFFGYDRTEEHEAFLDWLAGEILRQEIDALIIAGDVFDVSNPSAASQ 61 Query: 61 TLYNRFV--VNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTV----------VASA 108 ++Y RF+ V + +V++AGNHDS A L ++ + T V Sbjct: 62 SIYYRFIYRVTAENPNLQIVIVAGNHDSAARLEAPLPLLQAMRTEVRGVVRKLEGGAVDY 121 Query: 109 GHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADA 168 H L R G + +PFLR D Q N + + + Y Q Sbjct: 122 DHLCVELKNRQGEVELLCMAVPFLRQGDYPVVQTEGNPYSE------GVRELYTQLLRKL 175 Query: 169 CKLRGDQPLPIIATGHLTTVGA--SKSDAVRDIYIGTLDAFPAQNFPPA-DYIALGHIHR 225 K R I+A GHL G+ ++ D IG L+ + FP Y ALGHIH+ Sbjct: 176 WKRRKPNQ-AILAIGHLQATGSEIAEKDYSERTVIGGLECVSPEAFPEQIAYTALGHIHK 234 Query: 226 AQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPM 279 AQ + G E+VRY GSPIP+SF E V +V F G + + P + P+ Sbjct: 235 AQRVSGRENVRYAGSPIPMSFAERHYHHGVVMVAFDGGCAVDIRRIECPKSIPL 288 >UniRef50_C7M699 Nuclease SbcCD, D subunit n=2 Tax=Capnocytophaga RepID=C7M699_CAPOD Length = 407 Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 118/393 (30%), Positives = 186/393 (47%), Gaps = 38/393 (9%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M +LHT+DWHLGQ FY R EHQ FLD LL+ + D ++++GDVFDT +P + Sbjct: 1 MNLLHTADWHLGQTFYQYDRYNEHQYFLDNLLQIIEEQHTDVLLISGDVFDTANPAVASV 60 Query: 61 TLYNRFVVNLQQTGCHL--VVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ----- 113 + F+ + L + +AGNHDS L + ++ +V Q Sbjct: 61 KQFYHFLHQATERFPQLQIIAIAGNHDSPVRLEMPQPLLEDTQVHLVGYVKRNEQREIDY 120 Query: 114 ---ILPRRD-GTPGAVLCPIPFLR----PRDIITSQAGLNGIEKQQHLLAAITDYYQQHY 165 I+P + G A +PFLR P++ T+ G+E +Y++ Sbjct: 121 KRLIIPLYERGEVMAYCLAVPFLRLGDTPKNEDTNPDYTQGVEA----------FYREIT 170 Query: 166 ADACKLRGDQPLPIIATGHLTTVGASKSD---AVRDIYIGTLDAFPAQNFPPA-DYIALG 221 A + +PL IA GHL +GA SD A R I IG ++ F +FP YIALG Sbjct: 171 EKALAIAKGKPL--IAMGHLHALGAELSDEDTAERPI-IGGMEGFKPTSFPNVLQYIALG 227 Query: 222 HIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAV 281 HIH+AQ +GG H+RY GSPIPLSF E V + G+++ ++ + +P+ PM Sbjct: 228 HIHKAQTLGGKAHIRYSGSPIPLSFSEKDYQHQVVAFSLEEGRVQDIKTVPIPLHTPMLS 287 Query: 282 LKGDLASITAQLEQW----RDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEV-- 335 + + L + + P +L++++ +E +++ I V + Sbjct: 288 VPERPLPVKEVLNALASLPKGTTHTPAPYLEVKVLLNEPAPELKNSILKAIAHKHVRLAR 347 Query: 336 LLVRRSREQRERVLASQQRETLSELSVEEVFNR 368 + VR ++Q + Q+ TL++L EV R Sbjct: 348 IDVRYQQQQNTKKETLQKEITLNDLQPYEVLQR 380 >UniRef50_C9RQA4 Nuclease SbcCD, D subunit n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RQA4_FIBSS Length = 438 Score = 159 bits (401), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 128/430 (29%), Positives = 198/430 (46%), Gaps = 53/430 (12%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ +HT+DWHLG + R E AFL WL + A+I+AGD+FD +P + A+ Sbjct: 1 MKFIHTADWHLGNMMHDIDRTEEAAAFLKWLKGEIERVGAQALIIAGDIFDIVNPSNVAK 60 Query: 61 TLYNRFVVNLQQTGC-HLVVLAGNHDSVATLNESRDIMAFLNTTVVAS-AGHAPQ--ILP 116 T Y +F+ +L +T C ++VV+ GNHDS A L+ ++ LN VV S G + ++ Sbjct: 61 TQYYKFLASLLKTNCTNVVVVGGNHDSGALLDAPAGVLEALNIKVVGSINGRKVEDLVVE 120 Query: 117 RRDGTPG--AVLCPIPFLR--------PRDIITSQAGLNGIEKQQHLLAAITDYYQQHYA 166 +DG + C +PF+R D S G + + + L D Y+ Sbjct: 121 LKDGDENVIGICCAVPFMRNLELEQFYKTDERESGEGADDVSDEDLLKRLYGDVYRY--- 177 Query: 167 DACKLRGDQPLPIIATGHL---------------------TTVGASKSDAVRDIYIGTLD 205 A +LRG++ +PIIATGHL T S D VR++ IGTL Sbjct: 178 -AVELRGERNIPIIATGHLYASNLSGRNSDELGSGANENATISENSVEDGVREV-IGTLG 235 Query: 206 AFPAQNFPPA-DYIALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGK 264 FP DY+ALGHIH A ++ VRY GSP + FDE + V V + Sbjct: 236 NVDVSTFPSELDYVALGHIHYASMVAKNPKVRYSGSPFAMGFDESNCKRVVLTVDVKPNE 295 Query: 265 LESVENLNVPVTQPMAVLKGDLASITAQLEQWRD--VSQEPPVWLDIEITTDEYLHDIQR 322 + VE VP KGDL ++ L V+ ++D+ +TT +++ Sbjct: 296 VPVVEKEEVPKAMRFEQFKGDLETLKRCLRNLEKELVANPMETYVDLLLTTGDFVS---- 351 Query: 323 KIQALTESLPVEVLLVRRSREQRERVLASQQR-----ETLSELSVEEVFNRRLALEELDE 377 QAL + +V+R R R VL R E+ + + E+ F +A ++ Sbjct: 352 LNQALEAEEAGKHFVVKRHRISR-GVLRGANRFDDNVESTKQYTQEDYFRMLIATNAEEK 410 Query: 378 SQQQRLQHLF 387 + +++L+ Sbjct: 411 EDSEVVKNLY 420 >UniRef50_A6KXN3 Putative exonuclease n=5 Tax=Bacteroides RepID=A6KXN3_BACV8 Length = 400 Score = 157 bits (396), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 95/275 (34%), Positives = 148/275 (53%), Gaps = 28/275 (10%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHT+DWHLGQ FY R EH FL+WL + + H++D +++AGDVFD+ +P + ++ Sbjct: 1 MKILHTADWHLGQTFYEYDRREEHLHFLEWLKQQIRQHEIDVLLIAGDVFDSPNPSAESQ 60 Query: 61 TLYNRFV--VNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ----- 113 +Y RF+ V + ++++AGNHDS A L ++ +N TV + Sbjct: 61 RMYYRFLREVTSENPSLQIIIIAGNHDSAARLEAPNPLLENMNVTVRGVVRRNAEGDIDL 120 Query: 114 ---ILP-RRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADAC 169 I+P +G A +P+LR D +++ G++ LL Y+Q + + Sbjct: 121 QHLIVPLYTEGEVTAYCLAVPYLRQGDYPSAENYSKGVQ----LL------YEQLF-NEV 169 Query: 170 KLRGDQPLPIIATGHLTTVGA--SKSDAVRDIYIGTLDAFPAQNFPPA-DYIALGHIHRA 226 K +G LP+IA GHL G+ S+ D IG L+ F A Y ALGH+HR+ Sbjct: 170 KEKG---LPVIAMGHLQATGSEISEDDRSERTVIGGLECVSPDAFDEAIAYTALGHLHRS 226 Query: 227 QIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFS 261 Q + E+VRY G+P+P+SF E + V ++T S Sbjct: 227 QRVSHRENVRYSGTPMPMSFAERNNASGVVMITIS 261 >UniRef50_B6QZR0 Nuclease SbcCD, D subunit n=2 Tax=Alphaproteobacteria RepID=B6QZR0_9RHOB Length = 415 Score = 155 bits (391), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 118/391 (30%), Positives = 187/391 (47%), Gaps = 31/391 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 ++ILHT+DWH+GQ+ SR EHQ F L E + H+VDA++VAGDVFD +P + A Sbjct: 3 LKILHTADWHIGQSLNGWSRTYEHQQFFKELEELIERHEVDALVVAGDVFDNQNPSADAT 62 Query: 61 TLYNRFVVNLQQTGCHLVVL--AGNHDSVATLNESRDIMAFLNTTVVASA---------G 109 + + ++ HLV + AGNHD + + + V Sbjct: 63 QMLYEALARFREKRPHLVTVLTAGNHDPAGRVEAPGVLFQKIGVQAVGMVRRHDGLLDLS 122 Query: 110 HAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADAC 169 H L DG A + +PF R D+ + E+ ++ A+ + Y+ A Sbjct: 123 HHLVPLKDSDGAVKAYVLALPFPRATDL--PGLSFSSSEEGSPVVRAVAELYEAAVQQAR 180 Query: 170 KLRGDQPLPIIATGHLTTVGASKSD-AVRDIYIGTLDAFPAQNFP-PADYIALGHIHRAQ 227 + G+ +P+IATGHL G +S+ A R I IG A P + FP Y+ALGH+H+ Q Sbjct: 181 EQIGE--MPLIATGHLHVAGGLESEGAERRILIGGEHAMPWEQFPDDLTYVALGHLHKPQ 238 Query: 228 IIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLA 287 + G E +RY GSP PLS E V+L++FS+ + S+E L + P LKGD Sbjct: 239 KV-GKETIRYSGSPFPLSVTEQHYKHGVNLLSFSDAGVLSIERLALTRPVPFHRLKGDGG 297 Query: 288 SITAQLEQWRD---------VSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLV 338 + +L D V Q+P V +D+ ++ ++ + PV V Sbjct: 298 LLLEELVPALDALELDGNLPVEQQPFVHVDLRPQVSA--GGLKAEVDQILAEYPVRSAGV 355 Query: 339 RRSREQRERVLASQQRE--TLSELSVEEVFN 367 R++++ V++++ LSE+ +E+F Sbjct: 356 SVLRQKQQEVVSAEAESLIRLSEIGPDELFK 386 >UniRef50_UPI000178998B nuclease SbcCD, D subunit n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178998B Length = 394 Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 106/333 (31%), Positives = 167/333 (50%), Gaps = 25/333 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHT DWHLG+ +SR AE + FLD L++ A Q D I++AGDV+D+ +PP+ A Sbjct: 1 MRILHTGDWHLGRTLEGRSRLAEQERFLDELVKLADDQQADLILMAGDVYDSVNPPASAE 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASA-GHAPQILPRRD 119 L+ L + G +VV+AGNHD + ++A T++ + A + R Sbjct: 61 QLFYEAAARLTEGGRPMVVIAGNHDQPERVASVTPLVAARGITLIGTPIADAVTVATART 120 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLP- 178 G A + +P+ S+A LN + + Y + ++ + P Sbjct: 121 GET-AKIAALPY-------PSEARLNELLSVDGDEDQLRRAYSERVGKLMRMMAREFSPQ 172 Query: 179 --IIATGHLTTVGASKSDAVRDIYIG---TLDAFPAQNFPPADYIALGHIHRAQIIGGME 233 +A H+ +G +SD+ R I +G T+D P+ A Y ALGH+HR+Q + G Sbjct: 173 TVNLAMSHIYVLGGVESDSERPIQVGGAYTVD--PSALAVGAAYTALGHLHRSQAVKGDG 230 Query: 234 HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMA--VLKGDLASITA 291 +RY GSP+ SF E G++K V +V S G +E L + +P+ KG L + Sbjct: 231 MIRYSGSPLAYSFSEAGQAKSVTMVDVSPGGSPVIEELFLSSGRPLVRWKAKGGLDEVY- 289 Query: 292 QLEQWRDVSQEPPVWLDIEITTDEY--LHDIQR 322 +W D ++P ++D+E++ E L DIQR Sbjct: 290 ---RWLDEGRDPEAFIDLEVSLTEAMGLADIQR 319 >UniRef50_C4L7Q3 Nuclease SbcCD, D subunit n=9 Tax=Gammaproteobacteria RepID=C4L7Q3_TOLAT Length = 411 Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 112/385 (29%), Positives = 186/385 (48%), Gaps = 25/385 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M++LHT+DWHLG + R EH++FLDWL+ +D ++VAGDVFDT +P + + Sbjct: 1 MKLLHTADWHLGHRLHGHERYFEHRSFLDWLMNEISQRDIDGLLVAGDVFDTANPSATSW 60 Query: 61 TLYNRFVVNLQQTGCHL--VVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ----- 113 L+ +F+ L+Q HL +++AGNHDS + L+ +++ + ++ + Sbjct: 61 QLFYQFLATLRQQRPHLNVIIIAGNHDSPSKLDAPHELLKSFDLHLIGAVERDTDGRLNC 120 Query: 114 ---ILPRRD--GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADA 168 +P +D G A +PFLR D+ + NG E + L+A + + YQQ +A Sbjct: 121 DKLAIPLKDRTGCVQAWCAAVPFLRSADLRMDEEQ-NGEEDR--LVAGVREVYQQVFAHI 177 Query: 169 CKLRGDQPLPIIATGHLTTVGASKSD-AVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQ 227 LR + P++A GH S+ + R + G A P F ADY+ALGH+H AQ Sbjct: 178 DSLRTAEQ-PLLAMGHAYLQSGELSELSERKVLGGNQHALPLSVFNGADYVALGHLHLAQ 236 Query: 228 IIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLA 287 + E V Y GSP+PLS E + +T + ++ + + +P T + L A Sbjct: 237 SLS--EQVHYAGSPLPLSLAEQNYPHQLIELTVAEHQITVTDKIRIPRTVDILRLPAQPA 294 Query: 288 SITAQLEQWRDVS-----QEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSR 342 + A L + ++S Q +L++ + ++ ++ +I A PV + + Sbjct: 295 PLDAVLAELDNLSLTDLPQNQRPFLEVRVRLEKPEARLRERILAALVDKPVRLARIYTEY 354 Query: 343 EQRERVLASQQRET-LSELSVEEVF 366 +A Q L LS EVF Sbjct: 355 SGHGLGIADQMTSVPLDSLSPREVF 379 >UniRef50_Q2IN32 Exodeoxyribonuclease I subunit D n=3 Tax=Anaeromyxobacter RepID=Q2IN32_ANADE Length = 428 Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 130/394 (32%), Positives = 184/394 (46%), Gaps = 35/394 (8%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 +RILHT+DWHLG + R EH+ F+ WLL+TA+ VDA+IVAGDVFD +PP+ A+ Sbjct: 14 LRILHTADWHLGHALHGVDRGPEHERFVAWLLDTAEAEAVDAVIVAGDVFDAANPPAGAQ 73 Query: 61 TLYNRFVVNLQQ--TGCHLVVLAGNHDSVATLNESRDIMAFLN-----TTVVASAGHAPQ 113 L+ RF+ + LVV+ GNHDS + L+ ++ + V AP Sbjct: 74 ALWYRFLAEAWRRLPRLQLVVVGGNHDSASRLDAVDPLLREMGRLHVVGGVPRGGAGAPD 133 Query: 114 ----ILPRRD--GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYAD 167 ++P D G A + +P+LR D+ A + E + AA + + A Sbjct: 134 LEKLLVPLEDAAGRRAAWVAAVPYLRAADLGAGAADADAAEATRRFYAAALERARARRAP 193 Query: 168 ACKLRGDQPLPIIATGHLTTVGASKSD-AVRDIYIGTLDAFPAQNFPPAD--YIALGHIH 224 L +ATGHL VG S+ + R + +G A PA F PAD Y+ALGH+H Sbjct: 194 GEAL--------LATGHLYAVGGKTSELSERRLAVGNQAAVPADAF-PADLAYVALGHLH 244 Query: 225 RAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVP-----VTQPM 279 AQ +GG E VRY GS +PLSF E G V + + + L VP V+ P Sbjct: 245 LAQAVGGRETVRYSGSALPLSFGERGYRHGVVVADLDGEAVRAQRVLRVPRFVELVSVPD 304 Query: 280 AVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPV--EVLL 337 L + A LE E P L + L + ++AL + E L Sbjct: 305 GEAPAPLPEVLAALEAL-PARGEGPDALRPLLEVKVRLERPEPALRALLDQALAGKEARL 363 Query: 338 VR--RSREQRERVLASQQRETLSELSVEEVFNRR 369 VR + R L +R L +L E+VF R+ Sbjct: 364 VRIATTLAGTGRALGDGERRALGDLVPEDVFRRK 397 >UniRef50_D2MIT5 Exonuclease subunit SbcD (Fragment) n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MIT5_9BACT Length = 233 Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 88/241 (36%), Positives = 131/241 (54%), Gaps = 17/241 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHT+DWH+GQ + + R EH+ FL+WLLET Q HQV+ ++V+GD+FDT P S + Sbjct: 1 MKILHTADWHIGQRLHERQRTDEHKRFLEWLLETIQAHQVELLLVSGDIFDTALPSSEST 60 Query: 61 TLYNRFVVNL-QQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQI---LP 116 LY RF+ L +T + V+ AGNHDS L R+ + VV +A + LP Sbjct: 61 NLYYRFLYRLFSETDAYTVITAGNHDSPRHLEAPREFLEMGRIYVVGTADEPTKCVVTLP 120 Query: 117 RRDGTPGAVLCPIPFLRPRDI--ITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGD 174 R + P + +PFL D+ ++ + ++ E+ + + ++ YAD C Sbjct: 121 REN--PRIAVAAVPFLSESDLRHLSYETEVDRNERYR-------ERFKTFYAD-CVANMP 170 Query: 175 QPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPP-ADYIALGHIHRAQIIGGME 233 LP I GHL G D+ R++ IG A A +FP Y+ALGH+HR Q I G + Sbjct: 171 AELPKILMGHLFVQGGQVGDSERNVQIGGATATHASDFPKDVSYVALGHLHRPQTIKGTD 230 Query: 234 H 234 + Sbjct: 231 Y 231 >UniRef50_O68033 Nuclease sbcCD subunit D n=1 Tax=Rhodobacter capsulatus RepID=SBCD_RHOCA Length = 405 Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 109/297 (36%), Positives = 150/297 (50%), Gaps = 23/297 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYA- 59 MRILHT+DWH+GQ SREAEH+AFL L E QVDA++VAGDVFD +P A Sbjct: 1 MRILHTADWHIGQTLNGWSREAEHRAFLADLGEILLAEQVDALLVAGDVFDGLNPSGEAQ 60 Query: 60 RTLYNRFVVNLQQTG-CHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP------ 112 R LY ++ +V+ +GNHD L ++ L V+ + P Sbjct: 61 RLLYAALAGYVRANPRLQIVLTSGNHDPAQRLEAPEAVLRELGVHVLGTLSRGPGGMDLD 120 Query: 113 -QILPRRD--GTPGAVLCPIPFLRPRDIITSQAGL-NGIEKQQHLLAAITDYYQQHYADA 168 ++P RD G A + +PFLR D+ + G G E + AA+ + A A Sbjct: 121 RHLIPLRDRAGQIRAQVLALPFLRQADLPGLRLGAEEGTEGA--VTAALRALLAETVARA 178 Query: 169 CKLRGDQPLPIIATGHLTTVGASKS-DAVRDIYIGTLDAFPAQNFPPA-DYIALGHIHRA 226 + G LP+IA HLT G +S A R I IG A P FPPA ++ALGH+HR Sbjct: 179 AAIAGT--LPLIAMAHLTCAGGLESAGAERRILIGGDHAVPPDVFPPALAHVALGHLHRP 236 Query: 227 QIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLK 283 Q + G VRY G+P PLS E G V L+ + G ++P+ +P+ +L+ Sbjct: 237 QSLDG-GRVRYSGAPFPLSASEIGYDHGVTLLDLAGGAAPR----HIPLPRPVPMLR 288 >UniRef50_A5N4G1 Predicted exonuclease, sbcD related n=45 Tax=Clostridia RepID=A5N4G1_CLOK5 Length = 414 Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 102/361 (28%), Positives = 184/361 (50%), Gaps = 38/361 (10%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHTSDWHLG++ SR E +AFL+ + Q + VD +I+AGD++D +PP+ A Sbjct: 1 MRILHTSDWHLGKSLEGHSRMEEQEAFLEDFINIVQKNHVDLVIIAGDIYDNANPPARAE 60 Query: 61 TLYNRFVVNLQQTGCHL-VVLAGNHDS----VATLNESRD---IMA-----------FLN 101 ++ + + L G L +++AGNHD+ VA +RD IM + N Sbjct: 61 KIFYQTLKKLSSKGERLTLIIAGNHDNPDRLVAAGPLARDHGIIMMGTPKSIVPRGDYGN 120 Query: 102 TTVVASAGHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYY 161 V+ S +I ++ A++ +P+ P + ++ N +E+++ + + D Sbjct: 121 NKVINSGQGFIEIELNKE---KAIIIAVPY--PSEKRLNEVLYNSMEEEKEQIKSYNDRI 175 Query: 162 QQHYADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIG-----TLDAFPAQNFPPAD 216 ++ + + K + + I+ + HL T+G+ ++ + R++ +G D FP A Sbjct: 176 KKLFHNLSKNYREDTINILIS-HLFTLGSDQAGSERNVQLGGSFIVNKDCFPEN----AQ 230 Query: 217 YIALGHIHRAQIIGGME-HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPV 275 YIALGHIH+ QI+ G RY GSPI + E K +V GK ++ + + V Sbjct: 231 YIALGHIHKPQIVPGTNGKARYSGSPIQYNKKEINFKKKCFIVDVKAGKECNIHEIELKV 290 Query: 276 TQPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEV 335 +P+ V K +SI +E+ +++ W+ +E+TTD ++ + + K T+ +E+ Sbjct: 291 YKPIEVWK--CSSIEDAIERCTK-NKDRNCWVYLEVTTDRFIREDEIKFMKTTKKDIIEI 347 Query: 336 L 336 + Sbjct: 348 V 348 >UniRef50_C8WDX4 Nuclease SbcCD, D subunit n=1 Tax=Zymomonas mobilis subsp. mobilis NCIMB 11163 RepID=C8WDX4_ZYMMN Length = 406 Score = 145 bits (366), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 116/331 (35%), Positives = 156/331 (47%), Gaps = 28/331 (8%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHT+DWH+GQ SRE EHQ F D L + T VDA+++AGDVFD +P A+ Sbjct: 1 MRILHTADWHIGQTLNGWSREYEHQVFCDALRDVIVTEGVDALLIAGDVFDGINPSGEAQ 60 Query: 61 TLYNRFVVNLQQTGCHL--VVLAGNHDSVATLNESRDIMAFLNTTVV-------ASAGHA 111 L + + L V+ AGNHD L ++ L V+ A Sbjct: 61 RLLYAAIAGFLRANPRLQIVITAGNHDPAQRLEAPEAVLNELGVHVLGTLRRDAADVDLQ 120 Query: 112 PQILPRRD--GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADAC 169 ++P D GT A + +PFLR D+ Q G G + + A +DA Sbjct: 121 RHLIPLCDNTGTVHAHVLAVPFLRQADLPGLQLGATG--GAESAVTAAVRALHLAMSDAA 178 Query: 170 KLRGDQPLPIIATGHLTTVGASKSD-AVRDIYIGTLDAFPAQNFPPA-DYIALGHIHRAQ 227 + + LPIIA GHLT G +S+ A R I IG A P FPPA Y+ALGH+HR Q Sbjct: 179 ETQAGG-LPIIAMGHLTCSGGLESEGAERRILIGGEHAVPPDIFPPALSYVALGHLHRPQ 237 Query: 228 IIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPV---------TQP 278 + G VRY GSP P+S E G V L+ +G L PV P Sbjct: 238 SLDG-GRVRYSGSPFPMSAAEIGYDHGVTLLDLDDGFAPRHIPLPRPVPMHRLPATGVAP 296 Query: 279 MAVLKGDLASITAQLEQWRDVSQEPPVWLDI 309 +A + L ++ Q E RD +P ++L + Sbjct: 297 LAEVASALNALDLQCETPRDA--QPFIYLSL 325 >UniRef50_A7V415 Putative uncharacterized protein n=2 Tax=Bacteroides RepID=A7V415_BACUN Length = 403 Score = 145 bits (365), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 105/395 (26%), Positives = 173/395 (43%), Gaps = 31/395 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLG Y+ R E QAFL L Q DA++V+GD++ SP + + Sbjct: 1 MKILHTSDWHLGHTLYNYDRTVEQQAFLRQLTRIVTEEQPDAMVVSGDIYHYSSPAAATQ 60 Query: 61 TLYNRFVVNLQQTGCHL--VVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ----- 113 +Y ++N+ Q + VV AGNHDS + L ++ VV + + Sbjct: 61 KMYTDAMLNIHQACPEMTIVVTAGNHDSSSKLEIDSNLWQHFGLNVVGNIERTAEEVNLD 120 Query: 114 ----ILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADAC 169 + T G V+ +P + P++ ++Q A+ D Sbjct: 121 KHIIEINNEKKTKGYVIA-VPHVYPQNFPLLDTETPRDQRQARFFQALL--------DEV 171 Query: 170 KLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPA-DYIALGHIHRAQ- 227 K R LP++ HL+ G+ +S D IG ++ P DY+ALGHIH + Sbjct: 172 KKRNTAQLPVVLMAHLSIEGSDRSG--HDESIGGIEYVPLSAMGEGYDYLALGHIHCPRD 229 Query: 228 IIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLA 287 I G H RYCG+P+P+SFDE V ++ G + + P+ L D Sbjct: 230 IKGSHHHARYCGTPLPVSFDETYPHS-VSIIELEKGAEPQISTREIENPIPLVTLPHDPT 288 Query: 288 SITAQLEQWRDVSQEPPVWLDIEITTDEYL-HDIQRKIQALTESLPVEVLLVRRSREQR- 345 L+ + +E P +L + + T YL D K + + ++ +RE++ Sbjct: 289 PFEDALKLLEEYPEEKPAYLRLNVLTKGYLPPDCNEKASNAAKGKACKYCYIKTTRERQA 348 Query: 346 ----ERVLASQQRETLSELSVEEVFNRRLALEELD 376 + ++ Q+ + +S L + ++ R EE+D Sbjct: 349 DTDESKPISIQEMQEMSPLEIARLYYRETEGEEMD 383 >UniRef50_B7GYJ5 Exonuclease sbcD-like protein n=18 Tax=Acinetobacter RepID=B7GYJ5_ACIB3 Length = 422 Score = 144 bits (362), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 108/318 (33%), Positives = 157/318 (49%), Gaps = 39/318 (12%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 + LHTSDWHLGQ FY+ SR EHQ FL WLL Q Q A+++AGD+FD +P S A+ Sbjct: 7 VHFLHTSDWHLGQFFYNHSRHYEHQQFLSWLLTQIQEKQPHALLIAGDIFDVINPGSQAQ 66 Query: 61 TLYNRFVVNLQQTGCHL--VVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ----- 113 +F+ + + H+ +++AGNHDS + + ++ N V Sbjct: 67 KQLYQFLADAHRIAPHMQTLMIAGNHDSGYRIEQVEPLLEKYNAKTVGVVRWNEDKTLDL 126 Query: 114 ---ILPRRDGTPGAV--LCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADA 168 +LP + V +PFLR +I G N E + AI +QQ A+A Sbjct: 127 DRLLLPIYNQNQDIVAWCLALPFLRSAEI----TGFN--EHTTNSKNAIAYLHQQLIAEA 180 Query: 169 CKLRG-DQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPA-DYIALGHIHRA 226 + + DQ L +++ H+ G SD+ R I IG +A F A DY+ALGH+H+ Sbjct: 181 KRRKTPDQALILMSHAHMQ--GGETSDSERPIIIGNEEALSTTLFEDAVDYVALGHLHKP 238 Query: 227 QIIGGMEHVRYCGSPIPLSFDECGKSKYVHLV----------TFSNGKLESVENLNVPVT 276 Q + G H+RY GSPIPLSF E Y H V T S + E+VE +P Sbjct: 239 QKV-GQPHIRYSGSPIPLSFSEIN---YKHQVVEVKIDPAQDTDSRLQFEAVE---IPRC 291 Query: 277 QPMAVLKGDLASITAQLE 294 + ++G+L + QL+ Sbjct: 292 IQLHRIRGELNEVLQQLK 309 >UniRef50_B7KZ12 Nuclease SbcCD, D subunit n=8 Tax=Alphaproteobacteria RepID=B7KZ12_METC4 Length = 415 Score = 142 bits (357), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 129/408 (31%), Positives = 188/408 (46%), Gaps = 53/408 (12%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 +R+LHT DWH+GQ SRE EH A L +VDA++VAGDVFD+ +P ++ Sbjct: 2 IRVLHTGDWHIGQTLRGFSREREHDAVFGCLESIVVEREVDALVVAGDVFDSQNPSGESQ 61 Query: 61 TLYNRFVVNLQ--QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRR 118 + + L + +V+ AGNHD+ L R ++ + VV + + RR Sbjct: 62 ARFYTLMARLHVARPAMTIVITAGNHDAAGRLEAPRPLLEAIGVHVVGN-------VRRR 114 Query: 119 DGTPG--------------------AVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAIT 158 DG AV P P ++S I + ++ A+ Sbjct: 115 DGAIDLDRHLVPVRSANGEVAAQVLAVSYPTAACLP--PLSSLGQPPRIGETSPIVRAVR 172 Query: 159 DYYQQHYADA-CKLRGDQPLPIIATGHLTTVGASKSD-AVRDIYIGTLDAFPAQNFPP-A 215 D Y Q + A +L G LP++ TGHL G +S+ A R I +G A P+ FP A Sbjct: 173 DLYGQLFEAARPRLAG---LPLLVTGHLHVAGGLESEGAERRILVGGEHAVPSDVFPEEA 229 Query: 216 DYIALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPV 275 Y+ALGH+HRAQ++ G VRYCGS IPLS E V LVT G E +E++ +P Sbjct: 230 RYVALGHLHRAQVL-GRGQVRYCGSLIPLSAAEQPYRHGVTLVTLGAGAAE-IEHIEIPR 287 Query: 276 TQPMAVLK-------GDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALT 328 P L DL L D+ E ++ + + + L + ++ + Sbjct: 288 PVPFLRLPASGDMPLADLGDHLNALALDPDLPMEARPYIQVRLAREGLLPGYRAEVDRIA 347 Query: 329 ESLPVEVLLVRRSREQRERVLASQQRET----LSELSVEEVFNRRLAL 372 ES PV V+ VR + QR +A ++ E LSE EE+F RLA Sbjct: 348 ESFPVRVVDVRVTVPQRT-AIAIEESEAPPPRLSERDPEELF--RLAF 392 >UniRef50_A7BEB8 Putative uncharacterized protein n=2 Tax=Actinomyces RepID=A7BEB8_9ACTO Length = 425 Score = 140 bits (354), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 119/404 (29%), Positives = 184/404 (45%), Gaps = 50/404 (12%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M ILHTSDWHLG+ + S AF++WL+ + VDA++++GDVFD PP A Sbjct: 25 MLILHTSDWHLGRTLHGASLGDSADAFIEWLVALVRERGVDAVLISGDVFDRAVPPVDAL 84 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 R + L + +++ +GNHD A L D++ + VV P G Sbjct: 85 ARMRRALRELTEI-TTVILTSGNHDGAARLGLFADMLT-PSLHVVTD--------PEAIG 134 Query: 121 TP----GAVLCPIPFLRPRDIITSQAGLNG----------IEKQQHLLAAITDYYQQHYA 166 TP GA++ P+P+L P + S + L Q +L A + Sbjct: 135 TPVEAGGALVYPMPYLEPDLVRQSLSDLPARGEADLPTPLPRSHQAVLGAALRRVRADL- 193 Query: 167 DACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPP----------AD 216 +A + GD+ P IA H GA SD+ RDI +G + + A F D Sbjct: 194 EAWRDAGDE-RPAIAMPHAFVTGAQASDSERDIQVGGVSSVSADLFDTLGGEEPLTHGLD 252 Query: 217 YIALGHIHRAQIIGGME-HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPV 275 Y+A GH+HR Q I G +RY GSPI SF E G +K + LVT + +E + +P Sbjct: 253 YVAAGHLHRPQDISGASVPIRYAGSPIAYSFSEAGATKSITLVTTDATSVTDIEVVPIPT 312 Query: 276 TQPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEV 335 + +AVL+G + + A ++ S ++ I +T D +R + + E P + Sbjct: 313 LRGIAVLEGTMDELLADPDEATTAS-----YVSITVTDDAR---PERMVPRIREVYPHAL 364 Query: 336 LLVRRSREQRE-----RVLASQQRETLSELSVEEVFNRRLALEE 374 ++V R + V AS+ ++E E V R L+ +E Sbjct: 365 VVVHRPSQAPALAPAMTVRASRDPREVTEEFYEAVGGRALSAQE 408 >UniRef50_D2NSE3 DNA repair exonuclease n=1 Tax=Rothia mucilaginosa DY-18 RepID=D2NSE3_9MICC Length = 409 Score = 140 bits (353), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 101/350 (28%), Positives = 159/350 (45%), Gaps = 33/350 (9%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLG+ F+ EHQ F+D LL +D ++++GDV+D+ P + + Sbjct: 17 MKILHTSDWHLGRTFHRSPLTREHQQFIDELLNYVHAEGIDTLLISGDVYDSTIPTAEST 76 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 TL ++ + L + G +++ +GNHDS L+ + S A + + DG Sbjct: 77 TLLDQALTRLMRAGVQVILSSGNHDSFRRLSYGAAFFEASGVHLRTSLEDATRPVELTDG 136 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQH-LLAAITDYYQQHYADACKLRGDQPLPI 179 T + IP+L PR A G++ H +L A+TD + A+ RG+ I Sbjct: 137 TLRVHVYAIPYLAPR----LHATALGVDPTHHAVLGAVTDAIRTDAAER-HARGEGADRI 191 Query: 180 IATGHLTTVGAS-------KSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGM 232 I H T + +SD+ RDI +G +D PA F DY+ALGHIH+ + Sbjct: 192 IVMSHATVSDTASSADTTPRSDSERDISVGGIDWVPASLFDGFDYVALGHIHKRYPV--T 249 Query: 233 EHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQ 292 +RY GSP+ SF E +L+ + G+ ++ M L+G + + Sbjct: 250 HTIRYSGSPLGFSFSEEHNRNGAYLIELTPGEEPTISGHEWATRVHMKTLRGTMEQLLNS 309 Query: 293 LEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSR 342 E +Y H +I+ E+LPV + RSR Sbjct: 310 PEH------------------TDYEHGYYCRIELTDETLPVGAVDRLRSR 341 >UniRef50_Q1NCL0 Nuclease SbcCD, D subunit n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NCL0_9SPHN Length = 410 Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 123/419 (29%), Positives = 186/419 (44%), Gaps = 52/419 (12%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 R++H+SDWH+G +S REAEH+AFL WLL+ + D ++V GD++D +PP A Sbjct: 8 FRLIHSSDWHIGHELFSHEREAEHEAFLSWLLDRLVAEEADLLLVTGDIYDVANPPVSAM 67 Query: 61 TLYNRFVVNLQQTGC---HLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQI--- 114 F+ + T C +V++ GNHDS A +N A L + G P++ Sbjct: 68 ARLYAFLRD-ATTRCPNLQIVIIGGNHDSAARINLP---AALLGPGRIHLIGSLPRVNGI 123 Query: 115 ---------LPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHY 165 L R GT A L +P+ RP D+ G G+ + Y Sbjct: 124 PDFERMLVPLKDRAGTIVAWLAAVPYCRPGDM-----GSGGLPEL---------YENVLT 169 Query: 166 ADACKLRGDQPLPIIATGHLTTVGASKSD-AVRDIYIGTLDAFPAQNFPP-ADYIALGHI 223 A A + G LP+I TGHL S+ + R I +G +A F A YIALGH+ Sbjct: 170 AGAERANG---LPLIVTGHLHVAEGDVSEHSERRITVGGEEAQATSLFDDRAAYIALGHL 226 Query: 224 HRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLK 283 HR Q I G +RY GSP PLS E + +V G + E +P P + Sbjct: 227 HRPQTIKGDTLIRYAGSPFPLSATERLYRHSISIVDLLGGGAAAREE-EIPRVVPFLTVP 285 Query: 284 GDLASITAQLE---QWRDVSQEPP----VWLDIEITTDEYLHDIQRKIQALTESLPVEVL 336 + ++E Q D E P ++++ + D ++Q ++ A + P+ + Sbjct: 286 AEGPKPIGEVELAIQELDFDPELPRGLHPFVEVSVLVDGPEPNLQARVMAALDGKPLRLT 345 Query: 337 LVRR--SREQRERVLASQQRETLSELSVEEVFN---RRLALEELDESQQQRLQHLFTTT 390 + R +RE + +A ++ + L+EL E VF R E E Q Q L T Sbjct: 346 RIARVSAREATNQSIAEREVD-LAELLPEAVFAELFERAHGSEPPEDLSQAFQALLIET 403 >UniRef50_A1SK69 Exodeoxyribonuclease I subunit D n=2 Tax=Actinomycetales RepID=A1SK69_NOCSJ Length = 386 Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 100/316 (31%), Positives = 149/316 (47%), Gaps = 19/316 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHTSDWHLG++F+ + A++D LLE + +VD ++VAGDV+D P A Sbjct: 1 MRILHTSDWHLGRSFHREGMLGHQAAYVDHLLEVVERERVDLVVVAGDVYDRALPHVDAV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA--PQILPRR 118 L + + L + +V+ +GNHDS L S ++ + AG P +L Sbjct: 61 RLADETLARLAASRAKVVLTSGNHDSAQRLGFSSRLIDAAGVFIRTDAGGVGTPVLLEDE 120 Query: 119 DGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLP 178 G P AV +P+L P D + GL G + AA+T+ ++ AD +P Sbjct: 121 HG-PVAVYG-LPYLDP-DAVREPWGLPGRSHE----AALTEAMRRVRADLAS----RPAR 169 Query: 179 IIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYC 238 + H GA SD+ RDI +G + P F DY ALGH+H + + VRY Sbjct: 170 SVVLAHAFVAGAQPSDSERDISVGGVSLVPTSVFDGVDYTALGHLHGRHTL--TDTVRYS 227 Query: 239 GSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRD 298 GSP+ SF E + K LV + + PV +P+A L+G L + L Sbjct: 228 GSPLAYSFSEATQVKGSWLVDLGADGVRECTFVEAPVPRPLARLRGTLDDLLHDLT---- 283 Query: 299 VSQEPPVWLDIEITTD 314 ++ W+ +T D Sbjct: 284 ITVHEDAWVQATLTDD 299 >UniRef50_A3YYZ0 Putative exonuclease n=1 Tax=Synechococcus sp. WH 5701 RepID=A3YYZ0_9SYNE Length = 396 Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 100/330 (30%), Positives = 164/330 (49%), Gaps = 27/330 (8%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR+LHTSDWHLG++F+ S E L ++ A+ VDA+++AGD++D PP+ A Sbjct: 1 MRLLHTSDWHLGRSFHGASLLQEQAEVLARIVALARDGVVDAVLIAGDLYDRAIPPAEAV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASA--GHAPQIL-PR 117 L+N + L+Q+G +V +AGNHDS ++ ++A T+ H P ++ PR Sbjct: 61 LLFNDTLAQLRQSGAAVVAIAGNHDSHVRVSVYDPLLASFGVTIRGDVRRAHEPVLVSPR 120 Query: 118 RDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL------ 171 G P A+ P+P+L P GL +Q+ AA+ + + + +L Sbjct: 121 LGGAPVAIY-PLPYLEP---AVDGPGLAWALEQE---AAVVPPTRLRHDEVTRLALERIR 173 Query: 172 RGDQPLP---IIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQI 228 R Q P + H G S++ R++ +G +D + F DY+ALGH+H +Q Sbjct: 174 RDLQQRPHHRSVLVAHTFVAGGESSESERELTVGNVDRVSVEAFTGFDYVALGHLHGSQQ 233 Query: 229 IGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLAS 288 + G + Y G+P+P SF E +K V +V + +VE + + V + +A ++G + Sbjct: 234 LDG-PRLAYSGTPLPYSFSEQHHTKSVRIVELNAAGQPTVEIVPLQVGRSLATIEGCIEQ 292 Query: 289 ITAQLEQWRDVSQEPPVWLDIE-ITTDEYL 317 + RD E V + I TDE L Sbjct: 293 LC------RDPQFEAAVEARVRVILTDEVL 316 >UniRef50_B3CEC9 Putative uncharacterized protein n=4 Tax=Bacteroides RepID=B3CEC9_9BACE Length = 405 Score = 138 bits (348), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 96/397 (24%), Positives = 178/397 (44%), Gaps = 32/397 (8%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLG Y+ R E QAFL L + DA++V+GD++ +P + + Sbjct: 1 MKILHTSDWHLGHTLYNYDRSREQQAFLKQLTRIVAEEKPDAMVVSGDIYHYSTPSASTQ 60 Query: 61 TLYNRFVVNLQQT--GCHLVVLAGNHDSVATLNESRDIMAFLNTTVVAS----------A 108 +Y ++ + + G +VV AGNHDS + L + VV + Sbjct: 61 KMYTDGMLEIHRACPGMTIVVTAGNHDSSSKLEIDSSLWNHFGVKVVGNIERNQEEVNLE 120 Query: 109 GHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADA 168 H ++ R G ++ +P + P++ E+Q A+ D ++ A+ Sbjct: 121 KHIVEVKDERGILKGYIIA-VPHVYPQNFPILDTETPREERQTRFFQALQDEVEKMNAEK 179 Query: 169 CKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPA-DYIALGHIHRAQ 227 LP++ HL+ G+ ++ D +G ++ P DY+ALGHIH Q Sbjct: 180 --------LPVVLMAHLSIEGSDQTG--HDETVGGIEYVPINAMGGGYDYLALGHIHCPQ 229 Query: 228 IIGGMEHV-RYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDL 286 I G H RYCG+P+P+SFDE V +V K ++ + + P+ L + Sbjct: 230 NIKGSRHCARYCGTPLPVSFDE-AYPHSVSIVEIQREKAPQIKTIEIENPMPLITLPKEA 288 Query: 287 ASITAQLEQWRDVSQEPPVWLDIEITTDEYLH-DIQRKIQALTESLPVEVLLVRRSREQ- 344 ++Q + + P ++ + + +YL D + + + ++ +RE+ Sbjct: 289 VDFEEAIKQLEEYPDDKPAYIRLNVLIKDYLAPDCNERASNAVKGKNCKFCYIKPNREKH 348 Query: 345 ----RERVLASQQRETLSELSVEEVFNRRLALEELDE 377 + ++ Q+ + +S L + +++ + +E+DE Sbjct: 349 TSDDETKHISIQEMQEMSPLEIAKLYFQEAEGKEMDE 385 >UniRef50_Q67MD2 DNA repair exonuclease n=1 Tax=Symbiobacterium thermophilum RepID=Q67MD2_SYMTH Length = 411 Score = 138 bits (348), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 110/350 (31%), Positives = 165/350 (47%), Gaps = 48/350 (13%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHT+DWHLG+ +SR+ EH+AF+D L + ++D +++AGDVFDTG+P + A Sbjct: 1 MRILHTADWHLGRTLEGRSRQEEHEAFVDELCAMVREERIDLVLIAGDVFDTGNPSAAAE 60 Query: 61 TLYNRFVVNLQQTGCH-LVVLAGNHDSVATLNESRDIMAFLNTT---------------- 103 LY + L + G +VV+AGNHDS L + + T Sbjct: 61 ELYCDALARLGENGRRAVVVIAGNHDSPDRLTAVQALAQRHGATMFGYPYDDPGVYTPGP 120 Query: 104 -----VVASAGHAPQILPRRDGTPGAVLCPIPF---LRPRDIITSQAGLNGIEKQ----- 150 V A G A +P D + AV+ +P+ R R +I G +++ Sbjct: 121 DRVQRVAAGPGWAELTVPGVDHS--AVVLALPYPSESRLRKLIADTLGEEELQRSYSDQV 178 Query: 151 QHLLAAITDYYQQHYADACKLRGDQPLPIIATGHLTTVGASKSDAV-RDIYI-GTLDAFP 208 + LAA ++ DA +L T HL G +SD V R I + G P Sbjct: 179 KGWLAAAAGRFR---PDAVRL---------VTSHLYMAGGVESDVVERPIQMGGAYTVHP 226 Query: 209 AQNFPPADYIALGHIHRAQIIGGMEHV-RYCGSPIPLSFDECGKSKYVHLVTFSNGKLES 267 A Y+ALGH+HR Q I G V RY GSPI SF+E G K V +V + + Sbjct: 227 CAVPETAQYVALGHLHRPQEIHGTAAVTRYSGSPISFSFNETGYVKGVTVVEVEP-RDPA 285 Query: 268 VENLNVPVTQPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYL 317 +VP++ +++ AQ+E+W ++P W+ +E+ T+ L Sbjct: 286 PRVRHVPISAGRPLVRWVAEDGLAQVERWVAEGKDPTAWISLEVHTEHPL 335 >UniRef50_Q2JDN8 Exodeoxyribonuclease I subunit D n=24 Tax=Actinomycetales RepID=Q2JDN8_FRASC Length = 418 Score = 137 bits (346), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 93/302 (30%), Positives = 137/302 (45%), Gaps = 26/302 (8%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR LHTSDWHLG+ Y AF+D L++ ++ VD +++AGDV D PP A Sbjct: 28 MRALHTSDWHLGRGLYGHDLMPAQAAFVDHLVDVVRSEGVDVVLIAGDVHDRAIPPVGAL 87 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNES-----------RDIMAFLNTTVVASAG 109 L++ + L+ G +VV++GNHD+ L + D A + VV Sbjct: 88 ELFDEALSRLRDAGARVVVISGNHDAARRLGDKAGLLDPRVRIRTDPAAVGDPVVVEDPA 147 Query: 110 HAPQI--LPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYAD 167 A ++ +P + + P P P AG+ + + A D + Y D Sbjct: 148 GAVRVYAIPYLEPSAANSQLPEPAQAPSGSDVPAAGIPAATMHRAMHAVRADLAR--YPD 205 Query: 168 ACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQ 227 A + H G + S++ RDI +G + PA+ F Y ALGH+HR Q Sbjct: 206 ARS---------VVVAHAWVTGGAASESERDISVGGVGNVPARLFEGITYTALGHLHRPQ 256 Query: 228 IIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLA 287 I VRY GSP+ SF E G +K LV L +V + VP + M +L+G LA Sbjct: 257 AIA--PSVRYSGSPLAYSFSESGDAKASLLVEIGPTGLGNVTRIGVPARRRMTLLRGSLA 314 Query: 288 SI 289 + Sbjct: 315 DL 316 >UniRef50_A4X568 Exodeoxyribonuclease I subunit D n=3 Tax=Micromonosporaceae RepID=A4X568_SALTO Length = 382 Score = 137 bits (345), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 101/318 (31%), Positives = 150/318 (47%), Gaps = 24/318 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWH+G+ +SR EH+A L ++E A+ D II+AGD++DT +P A Sbjct: 1 MKILHTSDWHVGKVLKGRSRAEEHKAVLAGVIEVARREAPDLIIIAGDLYDTAAPTPEAT 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ---ILPR 117 L R + L++TG +V + GNHD+ A L+ R T+ S P I Sbjct: 61 RLVTRALTALRRTGADVVAIGGNHDNGAALDALRPWAEAAGITLRGSVREDPNEHVIDGT 120 Query: 118 RDGTPGAVLCPIPFLRPRDIITS--QAGLNGIEKQQHL---LAAITDYYQQHYADACKLR 172 +G L +PFL R + + L E Q L I + +A+ ++ Sbjct: 121 TNGGEQWRLAALPFLSQRYAVRAVEMYELTAAEANQTYADHLGRIVARLTESFAEPDRVH 180 Query: 173 GDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFP-PADYIALGHIHRAQIIGG 231 + T HLT VGA+ RD + A PA FP A Y+ALGH+HRAQ + G Sbjct: 181 -------LVTAHLTVVGATTGGGERDAHTVLGYAVPATVFPGTAHYVALGHLHRAQRVDG 233 Query: 232 MEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITA 291 +RY GSP+ + F E V +V + V + +P + ++G LA + A Sbjct: 234 GCPIRYSGSPLAVDFGEQENVPSVTVVEVTATTAAQVREVPIPAAASLRTVRGTLAQL-A 292 Query: 292 QLEQWRDVSQEPPVWLDI 309 ++E P WL + Sbjct: 293 EVEV-------PDAWLRV 303 >UniRef50_A3WLK0 Exonuclease SbcD, putative n=1 Tax=Idiomarina baltica OS145 RepID=A3WLK0_9GAMM Length = 382 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 91/301 (30%), Positives = 152/301 (50%), Gaps = 24/301 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLG+ F+ +S + L ++E VDA+I+AGD++D PPS A Sbjct: 1 MKILHTSDWHLGRLFHQQSLLEQQIELLQQIVEIIDQQAVDAVIIAGDIYDRSVPPSAAI 60 Query: 61 TLYNRFV----VNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILP 116 + +N F+ V+ Q+T ++ ++GNHD L + ++ N +V A + + Sbjct: 61 SAFNDFIEEVAVSRQKT---IIAISGNHDGAERLGFATSLLKQSNLHLVTELPQALEPIV 117 Query: 117 RRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQP 176 D + +PF P ++ L ++ H ++ ++ Sbjct: 118 LNDSATTIDIWCVPFHDP------------LQVNNWLDTDCKEFNTAHQMIVDRINAERN 165 Query: 177 ---LPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGME 233 L +I + H GAS+S++ R + IG D Q F DY ALGH+H+ Q GME Sbjct: 166 PAHLNMIVS-HCYLDGASESESERPLSIGGADRVDWQLFKDFDYAALGHLHQPQ-HKGME 223 Query: 234 HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQL 293 H+RY GS + SF E +SK + L+ + +++++ +++ ++ M VLKG LA + AQ Sbjct: 224 HIRYSGSLMKYSFSEVNQSKSITLLDVNEKGVQNIQQISLKPSRDMRVLKGTLAELIAQA 283 Query: 294 E 294 E Sbjct: 284 E 284 >UniRef50_C6XKD2 Nuclease SbcCD, D subunit n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XKD2_HIRBI Length = 379 Score = 133 bits (335), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 91/300 (30%), Positives = 148/300 (49%), Gaps = 21/300 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLG+ F S +HQ FLD L + D +I+AGD+FD SPP+ A Sbjct: 1 MKILHTSDWHLGRTFKHASLIDDHQHFLDQLKIVLDQQKPDVLIIAGDIFDRASPPASAV 60 Query: 61 TLYNRFVVNLQ-QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAG-----HAPQI 114 + + F ++ T L++LAGNHDS + + AF + V G P I Sbjct: 61 SQFEDFQRHVYFNTQTALIILAGNHDSGERVGMN---GAFADPKRVLIRGRLQRDEKPLI 117 Query: 115 LPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGD 174 L G +P+ +I +++ + +A D Q A + + Sbjct: 118 LNDEFGE--VAFSALPY---GEIFSARECFEKAD-----IATPADVLNQQVECAKQFVPN 167 Query: 175 QPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEH 234 +I + H GAS ++ R + +G ++ A F A Y+ALGH+HR+Q +G EH Sbjct: 168 GARWVI-SAHAFVTGASTTETERSLCVGGIETVSADTFNGAHYVALGHLHRSQKVGA-EH 225 Query: 235 VRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLE 294 +RY GSP+ +FDE G K + L+T +E+++ + + + + ++G L+ + Q + Sbjct: 226 IRYSGSPLSFAFDEVGNEKSMTLITLGQSGVENIDLIPIKPLRAVREIRGALSDLEKQTD 285 >UniRef50_C6R472 Exodeoxyribonuclease I subunit D n=1 Tax=Rothia mucilaginosa ATCC 25296 RepID=C6R472_9MICC Length = 398 Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 114/401 (28%), Positives = 181/401 (45%), Gaps = 53/401 (13%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLG+ F+ EHQ F+D LL ++ ++++GDV+D+ P + + Sbjct: 1 MKILHTSDWHLGRTFHRSPLTREHQQFIDELLNYVHAEGINTLLISGDVYDSTIPTAEST 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 TL ++ + L + G +++ +GNHDS L+ + S A + DG Sbjct: 61 TLLDQALTRLMRAGVQVILSSGNHDSFRRLSYGAAFFEASGVYLRTSLEDATCPVELTDG 120 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACK--LRGDQPLP 178 T + IP+L PR + + G++ Q +L +TD + ADA + RG+ Sbjct: 121 TLRVHVYAIPYLAPR-LHATALGVD--PTHQAVLGTVTDAIR---ADAVERHARGEGADR 174 Query: 179 IIATGHLT---TVGAS---------KSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRA 226 II H T T G+ +SD+ RDI +G +D PA F DY+ALGHIH+ Sbjct: 175 IIVMSHATVSDTTGSDIAGSADTTPRSDSERDISVGGIDWVPASLFDGFDYVALGHIHKR 234 Query: 227 QIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDL 286 + +RY GSP+ SF E +L+ + G+ ++ + M L+G + Sbjct: 235 YPV--THTIRYSGSPLGFSFSEEHNRNGAYLIELNPGEEPTISSHEWATRVHMKTLRGTM 292 Query: 287 ASITAQLEQWRDVSQEPPVWLDIEITTDEYL----------------HDIQRKIQALTES 330 + L + E + IE+ TDE L H R Q T+ Sbjct: 293 DQL---LNSPENSPYEQGYYCRIEL-TDETLPVGAVDRLRSRYETISHFSYRSTQPATDK 348 Query: 331 LPVEVLLVRRS----------REQRERVLASQQRETLSELS 361 PV L R + + R R L S++R+ ++ LS Sbjct: 349 -PVAAPLTRDADPVETFDQFHQYVRNRPLTSEERDVITTLS 388 >UniRef50_Q0HTQ0 Exodeoxyribonuclease I subunit D n=26 Tax=Gammaproteobacteria RepID=Q0HTQ0_SHESR Length = 400 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 90/298 (30%), Positives = 145/298 (48%), Gaps = 23/298 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR +HTSDWH+G+ +++S + LD ++ A+ H VDA+I+AGD++D PP+ A Sbjct: 1 MRFIHTSDWHIGRQLHNQSLLEDQAYVLDQIVTLAEQHTVDAVIIAGDIYDRSIPPASAV 60 Query: 61 TL----YNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVA--SAGHAPQI 114 L NR + L G ++++AGNHD L + MA ++ A P Sbjct: 61 ALLDEVLNRLITEL---GLQVLMIAGNHDGHERLGFAAKQMAASGLHIIGPLQADLTPIR 117 Query: 115 LPRRDGTPGAVLCPIPFLRP---RDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 L G A P+P+ P R + + A G+ + +A + + + H + Sbjct: 118 LTSSSGD--AYFYPLPYAEPATVRQVFEADAKGLGVSSHEEAMALLLEQVRSHDS----- 170 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG 231 Q LP + H G S+S++ R + IG D + F DY+ALGH+H Q G Sbjct: 171 ---QGLPKVVVSHCFLDGGSESESERPLSIGGADKISPRLFSEFDYVALGHLHGPQYKGS 227 Query: 232 MEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASI 289 EHVRY GS + SF E + K V LV + ++ L + + + +++G+LA + Sbjct: 228 -EHVRYSGSILKYSFSEQHQHKSVTLVDVTAHTPAQIQLLPLTALRDVRIIEGELAHL 284 >UniRef50_P23479 Nuclease sbcCD subunit D n=16 Tax=Bacillales RepID=SBCD_BACSU Length = 391 Score = 131 bits (330), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 99/327 (30%), Positives = 156/327 (47%), Gaps = 23/327 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHT+DWHLG+ +SR +E LD L + Q+DAI++AGD FDT +PP+ A Sbjct: 1 MRILHTADWHLGKTLEGRSRLSEQADVLDELNTIVKDEQIDAIVMAGDAFDTVNPPALAE 60 Query: 61 TLYNRFVVNLQQTGCH-LVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L+ + L G +VV+AGNHD+ L+ + + ++ P P Sbjct: 61 QLFYESLSALSDRGKRPIVVIAGNHDNPDRLSAASPLTHENGIHLIGY----PTTEPIHI 116 Query: 120 GTP--GAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADA-----CKLR 172 P G +L P S+A LN + + D+Y A + R Sbjct: 117 EVPSAGELLAVGALAYP-----SEARLNEVLSDTFDEKLLRDHYDVKIRQAFEHMTSRFR 171 Query: 173 GDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPP-ADYIALGHIHRAQIIGG 231 D IA H+ G +++D+ R I +G A++ P A Y+ALGH+HR Q I Sbjct: 172 TDAVK--IAASHIYVAGGNQTDSERPIEVGGAYTVAAESLPADAAYVALGHLHRPQTIKR 229 Query: 232 MEHV-RYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASIT 290 + RY GSP+ SF E G +K V +V G+ + + + + +P+ +K A+ Sbjct: 230 ARTLARYSGSPLAYSFSEAGYAKSVTIVDAKPGEEATWQEVLLSSGKPL--VKWKAANGL 287 Query: 291 AQLEQWRDVSQEPPVWLDIEITTDEYL 317 +++ W D ++ W+D+EI + L Sbjct: 288 SEVYSWLDEGRDQNAWIDLEIRVADQL 314 >UniRef50_C9LH67 Exonuclease SbcCD, D subunit n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LH67_9BACT Length = 413 Score = 131 bits (329), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 109/358 (30%), Positives = 161/358 (44%), Gaps = 51/358 (14%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M++LHT+DWHLG FY REAE + +L WL +T Q D +++AGDVFD +P + A Sbjct: 1 MKLLHTADWHLGNAFYGYDREAEFKHYLAWLRQTLAEQQPDVLLIAGDVFDHPNPSAEAE 60 Query: 61 TLYNRFVVNLQQ--TGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ----- 113 ++ RF+ + +G +VV+AGNHDS A L ++ N V + P Sbjct: 61 KMFFRFLCTAAEEVSGLQIVVIAGNHDSGARLEAPAGLLYLHNIYVRGTIERLPDGTPDF 120 Query: 114 ---ILP--RRDGTPGAVLC-PIPFLRPRDI---ITSQAGLNGIEKQQHLLAAITDYYQQH 164 ILP RRD ++C +P+LR D +T + GL+ Y++Q Sbjct: 121 DRLILPLSRRDNNEAEIVCFAVPYLRSGDYPAGMTQEEGLHY-------------YFEQL 167 Query: 165 YADACK--LRGDQPLPIIATGHLTTVGA--SKSDAVRDIYIGTLDAFPAQ-NFPPADYIA 219 + K RG LP+I H A S+++ + +G D A YIA Sbjct: 168 WKHLRKSDFRG---LPVIPLAHYYAADARLSETEHSERLVVGGQDRVEGDVAGRDAAYIA 224 Query: 220 LGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLN-VPVTQP 278 LGHIHRAQ + + Y GS +P+SF E L+ V L P+ Q Sbjct: 225 LGHIHRAQEV--RKRTFYAGSILPMSFSEKYYDHGAQLIELDEEGRAGVSRLTYTPLRQL 282 Query: 279 MAVLKGDLASITAQLE-----QWRDVSQEPPVWLDIEITTDE------YLHDIQRKIQ 325 ++ + AS LE R+ E W +E+ E +LHD+ +Q Sbjct: 283 KSIPEKGAASAGEVLELISRLPRREKDDEGLGWPYLELRVKEEQPEPQFLHDVTTALQ 340 >UniRef50_A7VIT3 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VIT3_9CLOT Length = 385 Score = 131 bits (329), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 104/386 (26%), Positives = 186/386 (48%), Gaps = 26/386 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M++ H SD H+G+ + + D +L + Q DA+++AGD++D P + A Sbjct: 1 MKLFHLSDLHIGKIVNGYEMWEDQRYVFDQILAYVREEQPDAVMIAGDIYDKAVPSAKAV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 T ++ F+ L +G +++++GNHDS L+ + IM N + + G + +D Sbjct: 61 TEFDEFLTELADSGTIILIISGNHDSAERLDFASSIMKKQNIYMKGTYGGEAMKVTMQDK 120 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 +PF++P ++ + + L +++ T+ QQ A A ++ + +I Sbjct: 121 WGDVNFYLMPFVKPSNVKNTLSDLTEEPEKESAALTYTEAMQQAVA-AMQVDPGKRNVLI 179 Query: 181 ATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGS 240 A ++T G ++ I IG LD F DY+ALGH+H Q IG E +RYCG+ Sbjct: 180 AHQNVTNSGVNRRSDSETISIGGLDNIDRTVFDIFDYVALGHLHSPQQIGKPE-IRYCGT 238 Query: 241 PIPLSFDECGKSKYVHLVTFS-NGKLESVENLNVPVTQPMAVLKGDLASITAQLEQW--R 297 P+ S E K V +V GKL E +P+ Q A + T L++ R Sbjct: 239 PVIYSMSEADDQKSVTVVELGEKGKLSIRE---LPLHQLHA-----WYNFTGTLDEAMSR 290 Query: 298 DVSQEPPVWLDIEITTDEYLHDIQRKIQALTESL-PVEVLLVRRSREQRERVLASQQRET 356 + +++ + I +T E + D+Q +++ + ++L VE + SR ++ER L E Sbjct: 291 EANED---YARIVLTDKETIIDVQARLRTVYKNLMSVEFQMADGSRPEQERTL-----ED 342 Query: 357 LSELSVEEVF----NRRLALEELDES 378 + L+ +E F NR++ E DE+ Sbjct: 343 VKNLAPDEAFADFYNRKMKRELSDEN 368 >UniRef50_D1VPG1 Nuclease SbcCD, D subunit n=1 Tax=Frankia sp. EuI1c RepID=D1VPG1_9ACTO Length = 394 Score = 130 bits (328), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 94/316 (29%), Positives = 150/316 (47%), Gaps = 34/316 (10%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ LHTSDWH+G++ +SR + +A L ++ A+ ++VDA++VAGDV+D+ +P + A+ Sbjct: 1 MKFLHTSDWHIGKSLKGRSRLDDQEAVLREVVGIARDNEVDAVLVAGDVYDSAAPSAEAQ 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVV-----ASAGHAPQIL 115 L + ++ Q+TG ++V+AGNHD + R +M T+V A G Sbjct: 61 RLAVQTLLGFQRTGAEVIVIAGNHDHPRSFEAYRPLMGAAGITMVGTPRRADKGGVIAFN 120 Query: 116 PRRDGTPGAVLCPIPFL------RPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADAC 169 R G P V +PFL R +++T N Q + +T +A Sbjct: 121 ARGTGEPVRVAV-LPFLSQRFAIRAAELVTQTPAQNAARYDQVVRDLLTALRSGFSDEAV 179 Query: 170 KLRGDQPLPIIATGHLTTVGASKSDAVR------DIYIGTLDAFPAQNFPP-ADYIALGH 222 L ++A HLT G R D Y+ PA FP A Y+ALGH Sbjct: 180 NL-------VLA--HLTVTGGQLGGGERLAQSIFDYYV------PATAFPADAHYVALGH 224 Query: 223 IHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVL 282 +HR Q + V YCGSP+ + F E + V +VT S G S ++ V + + + Sbjct: 225 LHRRQTLPAPCPVEYCGSPLAVDFGEQDNTPVVRVVTASPGTPASGVDIPVTTGRRLRTV 284 Query: 283 KGDLASITAQLEQWRD 298 +G +A + ++ D Sbjct: 285 RGTVAELADGAAEYGD 300 >UniRef50_UPI0001AF0806 nuclease SbcCD, D subunit n=1 Tax=Streptomyces ghanaensis ATCC 14672 RepID=UPI0001AF0806 Length = 390 Score = 130 bits (327), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 95/315 (30%), Positives = 150/315 (47%), Gaps = 31/315 (9%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ LHTSDWH+G+ +R E + L ++ A+ H+VDA++VAGD++++ +P + A+ Sbjct: 1 MKFLHTSDWHVGKVLKGHNRLDEQRTVLREIVRVARDHRVDAVLVAGDLYESSAPSAQAQ 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASA-----GHAPQIL 115 L + ++ L++TG ++ +AGNHD AT + R +MA T+ +A G + Sbjct: 61 QLLVQTLLALRRTGAEVIAIAGNHDHAATFDAYRPLMASAGITLAGTARPAADGGVVEFT 120 Query: 116 PRRDGTPGAVLCPIPFLRPRDII--------TSQAGLNGIEK-QQHLLAAITDYYQQHYA 166 R G P AV +PFL R + T + G + + LLAA+T ++ Sbjct: 121 ARSTGEPVAVAL-LPFLARRHAVRAAQLVTETPREAATGYGRLVRDLLAALTAGFRDDTV 179 Query: 167 DACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPP-ADYIALGHIHR 225 + + HLT G R P FPP A Y+ALGH+HR Sbjct: 180 N------------LVMAHLTAAGGKLGGGERSAQSVLEYWVPTSAFPPDAHYVALGHLHR 227 Query: 226 AQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPV--TQPMAVLK 283 Q + V YCGSPI L F E S V +V G V VP+ + + ++ Sbjct: 228 RQSLPAPCPVHYCGSPITLDFGEENDSTVVLVVEAEVGTPTRV-TAEVPIGSGRRLRTVR 286 Query: 284 GDLASITAQLEQWRD 298 G + +T + E++ D Sbjct: 287 GTVDEVTRRAEEFGD 301 >UniRef50_A7HCA1 Nuclease SbcCD, D subunit n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HCA1_ANADF Length = 386 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 104/334 (31%), Positives = 161/334 (48%), Gaps = 33/334 (9%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 +RILHTSDWHLG+ + +S + L+ L E + + DA+++AGDVFD PP+ A Sbjct: 8 LRILHTSDWHLGRALHEESLLEDQAWALERLREVLREARPDALLIAGDVFDRAVPPAEAV 67 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSV------ATLNESRDIMAFLNTTVVASAGHAPQI 114 +L + F+ + G LV +AGNHDS A L E+R + L T SA P Sbjct: 68 SLLDDFLNQVAALGVPLVAIAGNHDSAERLAFGARLVEARGV--HLRGTHARSA--EPVE 123 Query: 115 LPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGD 174 +P + + P+P+L P + G G E + AA + ADA Sbjct: 124 IPGK-----GFIYPVPYLDPEVV----RGAEGDETLRGHAAATERVLVRVRADAAA---- 170 Query: 175 QPLPIIATGHLTTVGASKS-DAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIG-GM 232 +PLP + H GA++S D+ R + +G PA DY+ALGH+H Q + GM Sbjct: 171 RPLPTVLVAHAFVQGAAESPDSERPLAVGGSACVPAAALAGFDYVALGHLHAPQEVAPGM 230 Query: 233 EHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQ 292 RY GS + SF E G K V L G +E + + + + L+G L + Sbjct: 231 ---RYSGSLLKYSFGEAGHEKGVVLAEVERGATR-IERVPLGARRDVVRLEGTL----DE 282 Query: 293 LEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQA 326 L + RD++ +++ + + Y+ D + ++QA Sbjct: 283 LLRRRDLAPFERALVEVTLADEGYVFDAKNRLQA 316 >UniRef50_D1ADM3 Nuclease SbcCD, D subunit n=2 Tax=Actinomycetales RepID=D1ADM3_THECD Length = 390 Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 113/373 (30%), Positives = 167/373 (44%), Gaps = 30/373 (8%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHT+DWH+G+ ++R EH+A L L+E A+ VDA+IVAGDVFDT +P ++ Sbjct: 1 MKILHTADWHVGKVLRGRARADEHRAVLKELVELARAEDVDAVIVAGDVFDTSAPTPPSQ 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 L + ++ L++ G +VVLAGNHD L+ R ++ L VV RR Sbjct: 61 ALVMQTLLALREGGRQVVVLAGNHDDPRLLDVWRPVLGALGVHVVGRF--------RRPD 112 Query: 121 TPGAV-----------LCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADAC 169 G + L +PFL R ++ + L QH + + Q A Sbjct: 113 DGGVLSWTTRAGEDVRLAVMPFLSHRFVVRAVEALTDT-PDQHNRSYAARFAQLAAALTA 171 Query: 170 KLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPP-ADYIALGHIHRAQI 228 GD + ++A H T G R+ F A FPP Y ALGH+HR Q Sbjct: 172 GFGGDT-VNLVAA-HGTLPGGKLGGGEREAQTIFSYYFEATAFPPTVQYAALGHLHRRQQ 229 Query: 229 IGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLAS 288 + G + Y G+PI + F E S LVT G+ V + + + + + G L Sbjct: 230 MPGPCPIWYSGAPIAVDFGEEHNSPGALLVTVEPGRPAQVREVTLASPRSLRTVNGSLEE 289 Query: 289 ITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEV-LLVRRSREQRER 347 + AQ E +D WL + + R Q L +L V+V R + +RE Sbjct: 290 LEAQAESLQD------AWLRVVVAEKPRAGLADRVRQILPNALTVDVDERFRPTAARREG 343 Query: 348 VLASQQRETLSEL 360 A++ T EL Sbjct: 344 GGAARAARTPREL 356 >UniRef50_O51769 Nuclease sbcCD subunit D n=23 Tax=Borrelia RepID=SBCD_BORBU Length = 413 Score = 127 bits (319), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 95/350 (27%), Positives = 171/350 (48%), Gaps = 28/350 (8%) Query: 2 RILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYART 61 +ILHTSDWH+G+ + S E + FL +LLE + +D ++VAGDV+D+ P + Sbjct: 5 KILHTSDWHIGKKIENFSILKEQKNFLYFLLEFIKKENIDLLLVAGDVYDSKRPGFEEQR 64 Query: 62 LYNRFVVNLQQTGCH-LVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD- 119 L N F L T C VV++GNHD L+ ++ +++ N ++ QI+ +D Sbjct: 65 LVNNFFYELSFTSCKWCVVISGNHDKKDYLSINKKLLSRFNFFLITEYDSDEQIVLLKDN 124 Query: 120 GTPGAVLCPIPFLRPRDIITSQA-GLNGIEKQ---QHLLAAITDYYQQHYADACKLRGD- 174 G ++ +P + R I+ + G+E Q + L + + Y++ ++ + Sbjct: 125 GNLKFIVVCLPHINERLILGQNFDNIFGLEDQYSSKLFLENLENAYREKISNLSNFLENK 184 Query: 175 -QPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGME 233 + +P I H + K D + YI + F F Y+ALGHIH+ + + Sbjct: 185 YKGIPKILMAHSFFGSSKKIDTLGGSYIIPFNVF-GNGFS---YVALGHIHKFMKL--RD 238 Query: 234 HVRYCGSPIPLSFDE-CGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQ 292 ++ Y GSP+ SF+E C KY++++ F++ KL E VP+ + KG L + Sbjct: 239 NIVYSGSPMQYSFNETC--DKYINVLHFNDNKLILQEAFPVPIFNKLIFAKGSLNEVLDF 296 Query: 293 LEQWRDVSQEPPVWLDIEI------TTDEYLHDIQR----KIQALTESLP 332 L + + ++L IE+ + +E ++D+ R + +++ SLP Sbjct: 297 LANSKK-EESFTIYLKIELNEAVDTSAEESIYDLARLNFMNLVSISYSLP 345 >UniRef50_B8KMM7 Nuclease SbcCD, D subunit n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KMM7_9GAMM Length = 381 Score = 127 bits (318), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 106/392 (27%), Positives = 186/392 (47%), Gaps = 32/392 (8%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M++LHTSDWHLG+ + S + Q +D + A+ VDA+++AGD++D PP A Sbjct: 1 MKLLHTSDWHLGRFLHQHSLLDDQQHVVDQIAAIAKEESVDAVMIAGDLYDRAVPPGEAI 60 Query: 61 TLYNRFVVNLQ-QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQI---LP 116 LY++F+ + G ++ +AGNHDS + ++ TV +G P+ + Sbjct: 61 GLYDKFLDAICIDLGLPVLAIAGNHDSGERVGFGASLLGQAGYTV---SGQLPETFVPVT 117 Query: 117 RRDGTPGAVLCPIPFLRP---RDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRG 173 G + +P+ +P RD + + E + LL I + G Sbjct: 118 LNAGGESVDVFLVPYAQPAQVRDCYGVECNTHE-EAMKFLLGKIEE----------SRSG 166 Query: 174 DQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGME 233 D+P ++A H G+S SD+ R++ +G D PA F DY+ALGH+H Q E Sbjct: 167 DRPTVVMA--HCFVAGSSVSDSERELSVGGADNIPADLFVNFDYVALGHLHGPQRC-SEE 223 Query: 234 HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQL 293 H+RY GSP+ SF E G +K V +V + + SV + + + +++G L+ I L Sbjct: 224 HIRYSGSPLKYSFSEVGHTKSVTIVEIGSSGV-SVAQRTLRSLRDVRIVEGLLSEI---L 279 Query: 294 EQWR-DVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQ 352 EQ + D E ++ + ++ + D+ +++ + ++ ++V+ RS Q Sbjct: 280 EQAKTDPGSED--YIQVRLSDSDSQLDVMARLREVYPNV-MQVVYTDRSSPLMSSAEDIQ 336 Query: 353 QRETLSELSVEEVFNRRLALEELDESQQQRLQ 384 + F + + EEL+E+Q+ L Sbjct: 337 EHLHTGHFDRFARFFKEIKGEELNEAQRSHLN 368 >UniRef50_C7MH54 Exodeoxyribonuclease I subunit D n=3 Tax=Micrococcineae RepID=C7MH54_BRAFD Length = 387 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 91/301 (30%), Positives = 136/301 (45%), Gaps = 19/301 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLG+ + AFLDWL+E + +VD +++ GDV+D P + Sbjct: 1 MKILHTSDWHLGRTLHKVDLHEHQAAFLDWLVELVRAEEVDVVVIPGDVYDRAVPAVTSV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIM--AFLNTTVVASAGHAPQILPRR 118 TL + + L TG +V+ +GNHDS L R +M T V H P + Sbjct: 61 TLLDSALARLADTGATVVLTSGNHDSAERLGFGRSLMRSGVHLLTDVPGIEH-PVTVADE 119 Query: 119 DGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQ--P 176 G + +P+L P +A + + + LA + + D + R + Sbjct: 120 HGE--VLFFGLPYLEP-----DRARTELVAEGEAPLARSHEAVTRAALDRVRARAEHRPG 172 Query: 177 LPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQ----IIGGM 232 + H G SD+ RD+ +G +D+ PA DY+ALGH+H Q +G Sbjct: 173 ARTVVLAHTFVTGGEGSDSERDLSVGGVDSVPAGVLGGIDYLALGHLHGCQDLSRAVGAP 232 Query: 233 EHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLE-SVENLNVPVTQPMAVLKGDLASITA 291 Y GSP+ SF E K V +V E V + PV + + L+G LA + A Sbjct: 233 --AWYSGSPLAFSFSERHHRKSVLMVELGAPGTEVEVRRIETPVPRRLTELRGTLAQLLA 290 Query: 292 Q 292 Q Sbjct: 291 Q 291 >UniRef50_B5IJR3 Exonuclease n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IJR3_9CHRO Length = 402 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 91/323 (28%), Positives = 159/323 (49%), Gaps = 23/323 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 +R+LHTSDWHLG++F+ + +D L+E ++ VD +++AGD++D PP+ A Sbjct: 9 VRLLHTSDWHLGRSFHGHDLLSHQAEAMDRLVELSREAAVDLVVIAGDLYDRAIPPAEAV 68 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA--PQILPRR 118 L+ V L+Q G +V +AGNHDS ++ ++++ L+ T+ A P ++ R Sbjct: 69 RLFTDTVARLRQGGAAVVAIAGNHDSHVRVSVYDELLSALDVTIRGRWQRADEPVLVTPR 128 Query: 119 DGTPGAVLCPIPFLRP-------RDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 G + P+P+L P + ++ + G + + A+ ++ AD + Sbjct: 129 QGGQAVAVYPLPYLEPILDGPELQRLLEPEPEPEGQRLRHPEVTALA--VERIRADLARR 186 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG 231 G + + H G S S++ R++ +G +A P F DY+ALGH+H +Q + G Sbjct: 187 AGTRS---VLVAHAFVAGGSSSESERELSVGNAEAVPVSTFAGFDYVALGHLHGSQQLDG 243 Query: 232 MEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITA 291 + Y G+P+ SF E K V LV + VE + + V + + L G+L ++ A Sbjct: 244 -PRLAYSGTPLAYSFSEQHHVKSVRLVELAEDGTPRVEVVPLGVGRALRSLSGELEALLA 302 Query: 292 Q--LEQWRDVSQEPPVWLDIEIT 312 LE R W+ E+T Sbjct: 303 DPGLEDSRG------AWVRAELT 319 >UniRef50_A8FTM6 Nuclease SbcCD, D subunit n=25 Tax=Gammaproteobacteria RepID=A8FTM6_SHESH Length = 381 Score = 123 bits (309), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 85/295 (28%), Positives = 146/295 (49%), Gaps = 22/295 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ +HTSDWH+G+ +++S + + L +L A+ H+VDA+I+AGD++D PP+ A Sbjct: 1 MKFIHTSDWHIGRQLHNQSLIDDQRHILVQILALAEEHEVDAVIIAGDIYDRSIPPANAV 60 Query: 61 TLYNRFVVNLQQT-GCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGH--APQILPR 117 L + V +L ++++AGNHD L + M+ ++ +P L Sbjct: 61 ALLDDVVNSLVNVMKLPVIMIAGNHDGHERLGFASRQMSDSGLHIIGPLHKELSPITLKG 120 Query: 118 RDGTPGAVLCPIPFLRP---RDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGD 174 + G+ AV +P+ P R + +AG + + + + +H + Sbjct: 121 KSGS--AVFYGLPYADPATVRQVFDCEAG-----SHEQAMGVLLEQVHEHDS-------- 165 Query: 175 QPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEH 234 Q LP + GH G S+S++ R + IG D F P +Y ALGH+H Q G E Sbjct: 166 QGLPKVVIGHCFLDGGSESESERPLSIGGADKISPTLFTPFNYTALGHLHGPQ-YKGEEQ 224 Query: 235 VRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASI 289 VRY GS + SF E + K V LV F + +E L + + + +++G+L+++ Sbjct: 225 VRYSGSILKYSFSEQHQKKSVTLVDFDSQGKAQIELLPLTAKRDVRIVEGELSAL 279 >UniRef50_D2RLP4 Nuclease SbcCD, D subunit n=2 Tax=Acidaminococcus RepID=D2RLP4_ACIFE Length = 380 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 119/400 (29%), Positives = 187/400 (46%), Gaps = 57/400 (14%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR LHTSDWHLG+ F+ + +A LD +L+ A+ ++VDA++VAGDV+D PP+ A Sbjct: 1 MRFLHTSDWHLGRIFHGLHLLEDQRAALDQILDLAREYRVDALLVAGDVYDRAVPPTEAV 60 Query: 61 TLYN----RFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMA---FLNTTVVASAGHAPQ 113 L + R V++L+ +++AGNHD+ LN + + A T V A H P Sbjct: 61 NLLDETLRRLVLDLKIPA---LLIAGNHDNPDRLNFGQALFAARQLYITGPVDPAAH-PV 116 Query: 114 ILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLA---AITDYYQQHYADACK 170 +L DG P+P+ P + L+G +K H A + +Q + A K Sbjct: 117 VLEDADGP--VYFAPLPYCEP----LTATELSGEKKPTHEAALQWQVETILRQIPSRARK 170 Query: 171 LRGDQPLPIIATGHLTTVGASKS-DAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQII 229 +A H+ GA + D+ R + G F Y ALGH+H Q Sbjct: 171 ---------VALAHVFLTGARTTPDSERPLAAGGATTVSMDCFRDFHYTALGHLHACQ-- 219 Query: 230 GGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQP--MAVLKGDLA 287 +RYCGS + SF E + K VH+V SVE VP+T P +AVLKG Sbjct: 220 NNSPRIRYCGSLLKYSFAEASQKKAVHIVDLDAKGDVSVE--TVPLTAPHELAVLKG--- 274 Query: 288 SITAQLEQWRDVSQEPPV-----WLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSR 342 ++RD+ + P +L I++T + D + ++ E + ++L + R Sbjct: 275 -------EFRDLLENPRTDHLQDYLQIQLTDGVPILDAKHRL----EQVYPQILQLGYER 323 Query: 343 EQ--RERVLASQQRETLSELSVEEVFNRRLALEELDESQQ 380 Q + A+ QR+ LS + + F R + +L E ++ Sbjct: 324 LQPLEKEETATAQRKGLSTDDLFQAFFREVQGRDLTEGEK 363 >UniRef50_C8WRD7 Nuclease SbcCD, D subunit n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WRD7_ALIAD Length = 425 Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 111/396 (28%), Positives = 176/396 (44%), Gaps = 32/396 (8%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHT+DWH G+ + R E F++ L VD +++AGDV+ T +P + A Sbjct: 1 MRILHTADWHFGKTLEGRDRAPEQWKFIEELAAICDAESVDLVLMAGDVYQTVNPSAEAE 60 Query: 61 TLYNRFVVNLQQTGCH-LVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILP--- 116 ++ + L G +V++AGNHD + R + L +V +I P Sbjct: 61 EMFYHALHRLAAGGRRGVVIIAGNHDHADRIRAPRWLADPLGIVLVGLPKD--EIRPTEA 118 Query: 117 RRDGT------PGAVLCPIPFLRPRDIIT-------SQAG--LNGIEKQQHLLAAITDYY 161 RRDG GAV +P R I S+ G L+ +++ + + +D Sbjct: 119 RRDGAWRPWGGVGAVELAVPSCPHRARIAAVPYPSESRLGEVLSESLEEREMRRSYSDRL 178 Query: 162 QQHYADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPP-ADYIAL 220 +A + + ++A+ H+ G ++D+ I +G A A FP A Y+AL Sbjct: 179 AGWFAVLARHFRPDTVNLLAS-HVYVAGGIETDSEIQIQVGGAYAVDASAFPATAQYVAL 237 Query: 221 GHIHRAQIIGGMEHV--RYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQP 278 GH+HR Q + G V RY GSPI SF E G+ K V LV G+ + + +P Sbjct: 238 GHLHRPQEMEGPGGVPIRYAGSPIAYSFSEAGQQKSVTLVDVEPGQRARWWEIPLSCGRP 297 Query: 279 MAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLP--VEVL 336 + + AS A++ W D ++ W+D+E+ D + R IQ L + P V + Sbjct: 298 LVRWR---ASSLAEVHAWLDEGRDADAWIDLEVRVDTEM--ALRDIQDLRGAAPHIVHIR 352 Query: 337 LVRRSREQRERVLASQQRETLSELSVEEVFNRRLAL 372 V +E E + A R E F ++ L Sbjct: 353 PVLPMQEAAESLDAQVSRPISPEALFRRFFEEKVGL 388 >UniRef50_C9L5R8 DNA repair exonuclease n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L5R8_RUMHA Length = 413 Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 101/358 (28%), Positives = 164/358 (45%), Gaps = 33/358 (9%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHT+DWH+G+ KSR E + L+ + A + D I +AGDVFD G P + A Sbjct: 1 MKILHTADWHIGKLLEGKSRLEEQRIVLEQFVSIADETEADVICIAGDVFDNGHPSAGAE 60 Query: 61 TLYNRFVVNLQQTGCHLVVL-AGNHDSVATLN-------ESRDIMAFLNTTVVASAGHAP 112 L + L + G LVVL AGNHD + L E I+ T + S + Sbjct: 61 MLLYHTLKELSRQGQRLVVLIAGNHDQPSRLEAIVPLAREHGIIIYGTPKTKIPSGKYGN 120 Query: 113 -QILPRRDGT-------PGAVLCPIPFLRPRDI--ITSQAGLNGIEKQQHLLAAITDYYQ 162 +I +G AV +P++ + + + + + ++ A I + +Q Sbjct: 121 FEIESLEEGVFSFSHKGEKAVFVCVPYVSEKTLNEVLYREEDSDEKRAADYAAKIGELFQ 180 Query: 163 QHYADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPP-ADYIALG 221 + + R + I H+ T+G K + + I +G P + FPP A Y+ALG Sbjct: 181 KKAS-----RYEYNTINILMSHVFTLGCKKDGSEQGIMLGNSYLLPPEVFPPKAQYVALG 235 Query: 222 HIHRAQ-IIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMA 280 H+HR Q ++G +RY GSP+P E +K LVT K VE+ P Sbjct: 236 HVHRPQKVVGSHGRIRYSGSPLPYRLQETVIAKQCSLVTLHPQKEAVVEDFY--FDNPKP 293 Query: 281 VLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEY-----LHDIQRKIQALTESLPV 333 + K S L++ + +Q P ++ ++I TD Y L +++ + + + E +PV Sbjct: 294 IEKWICKSYDEALKKCEE-NQNRPCYVYLQIYTDTYIREEQLKELKSRKEDILEVIPV 350 >UniRef50_A8VW68 N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VW68_9BACI Length = 389 Score = 121 bits (303), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 90/321 (28%), Positives = 154/321 (47%), Gaps = 23/321 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR+LHT+DWH G+ + R EH+AF+D L ++D +++AGD++D+ +PP+ + Sbjct: 1 MRVLHTADWHFGRTIEGRDRHDEHEAFIDELCGIVHEEEIDVVLIAGDIYDSVNPPAKSE 60 Query: 61 TLYNRFVVNLQQTGCHLVV-LAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L+ + L G VV ++GNHD L+ + A L V G P + P Sbjct: 61 RLFYDSLSRLSDFGKRTVVAISGNHDHPERLSAAS---AMLERHSVYIQGQ-PTLHPLTV 116 Query: 120 GTPGA--VLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQH----YADACK-LR 172 A LC +P+L S++ L + ++ I D Y Q + + K L Sbjct: 117 DIKAADQTLC-VPWLP----YPSESRLKEVLAEEADDKVIRDAYNQKIRWMFGELTKNLS 171 Query: 173 GDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPP-ADYIALGHIHRAQIIG- 230 D IA H+ G + SD+ R I +G + +FP DY ALGH+HR Q + Sbjct: 172 KDH--VNIAMSHVFAAGGNGSDSERPIEVGGSYTIASDSFPSNVDYTALGHLHRPQTLKH 229 Query: 231 GMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASIT 290 + RY GSP+ SF E G +K V ++ + G + +P++ +L+ + + Sbjct: 230 TIRPARYAGSPLAFSFGERGVAKSVTVLDITPGHEPDIR--EIPISSGKQLLRWEAVNGF 287 Query: 291 AQLEQWRDVSQEPPVWLDIEI 311 ++ W + ++ W+D+++ Sbjct: 288 DEVFHWMNERRDFGAWIDLKV 308 >UniRef50_C0EV38 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EV38_9FIRM Length = 399 Score = 120 bits (301), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 102/358 (28%), Positives = 174/358 (48%), Gaps = 33/358 (9%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+++HT+DWHLG+N SR E + FL + + Q D II+AGD++D +P + A Sbjct: 1 MKLIHTADWHLGKNIEGHSRLEEQRLFLKDFINICEEEQADIIIIAGDIYDNYNPSAMAE 60 Query: 61 TLYNRFVVNLQQTG-CHLVVLAGNHDS----VATLNESRD---IMAFLNTTVVASAGHAP 112 L+ + L + G C VV+AGNHD+ VA+ +RD +MA +V+ + Sbjct: 61 QLFYDTLKQLSRNGDCMTVVIAGNHDNPERLVASGPLARDHGIVMAGTPNSVITPGMYGK 120 Query: 113 QILPRRD---------GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQ 163 + D G +L +PF P + ++ L+ E++ A+ ++ Sbjct: 121 NEITESDAGYIHAIIHGEEADILL-VPF--PSEKRLNEVYLDETEEETKKAASYSEKMSS 177 Query: 164 HYADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPP-ADYIALGH 222 + + + +IA+ HL + + + + R I +G + FP ADYIALGH Sbjct: 178 LFGSLATHFHEDSIHLIAS-HLFVMNSVEDGSERSIQLGGSYMVGGEIFPENADYIALGH 236 Query: 223 IHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVL 282 +H+ Q + G RY GSP+P + E K V VT + G ++ L +PV +P+ V Sbjct: 237 VHKPQKVPGCPKARYSGSPLPFNVRETSFDKQVIAVTLTAGSPCTIRELPLPVYKPIEVW 296 Query: 283 KGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHD--------IQRKIQALTESLP 332 + +I +EQ + + + W+ +E+ TD Y+H+ I+ I ++T LP Sbjct: 297 HCE--NIDDAVEQC-EANADRECWVYLEVKTDHYIHEEDIKKMKAIKADILSITPVLP 351 >UniRef50_A8U5M2 Exonuclease sbcD n=1 Tax=Carnobacterium sp. AT7 RepID=A8U5M2_9LACT Length = 376 Score = 120 bits (301), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 101/376 (26%), Positives = 179/376 (47%), Gaps = 41/376 (10%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR+LHT+DWH+G+ S + FLD L+E +T +VDA+I+AGD++D P A Sbjct: 1 MRLLHTADWHIGKIVNELSMLEDQDYFLDQLIEKLKTVKVDAVIMAGDLYDRAMPSKEAV 60 Query: 61 TLYNRFVVNL-QQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L N+ + L Q+ ++V+AGNHDS + D++A T + G + R+ Sbjct: 61 ALANKVLTRLVQEVNVPVLVIAGNHDSNERVEYGADLLA---TNQLYIEGTVKE-KTRKV 116 Query: 120 GTPGAVLCPIPF---LRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQP 176 G +PF R+++ ++ + +E + +A K D P Sbjct: 117 TIKGVNFYLMPFADYAYIRELLQDES-IKSLEDAARV-----------QIEAIKKEMD-P 163 Query: 177 LPI---IATGHLTTVGASKS---DAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIG 230 I IA G++ + S D+ R + IGT + + F DY+ALGH+H+AQ + Sbjct: 164 TEINVLIAHGYVINLSNDTSETTDSERPLSIGTAEYVSVELFEAFDYVALGHLHKAQKVK 223 Query: 231 GMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASIT 290 + +RY GS + S E K + LVT +E +E + + + M V+KG +I Sbjct: 224 H-DRIRYSGSIMKYSKSEAVHKKQLSLVTLEKNHVE-IEPIYIQPKRDMRVIKGLFDNI- 280 Query: 291 AQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLA 350 + Q+ ++ E+ + ++ D + L P + L ++++RE + Sbjct: 281 --------MEQKSEDYVFFELLDENFVMD---AMNQLRRRYPNAMGLEYTAKKEREESSS 329 Query: 351 SQQRETLSELSVEEVF 366 + +E L +LS++++F Sbjct: 330 AMHQEQLKKLSIQDIF 345 >UniRef50_O67727 ATP-dependent dsDNA exonuclease n=2 Tax=Aquificaceae RepID=O67727_AQUAE Length = 379 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 95/355 (26%), Positives = 165/355 (46%), Gaps = 25/355 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR++H SD H G+N SR + L+ +++ + ++ D ++VAGDVFD +P + A+ Sbjct: 1 MRLIHLSDIHAGKNLGRVSRNEDVVYALNQVVDFCKENKPDLVLVAGDVFDKANPDNEAK 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 + F + L VV++GNHDS + + ++ ++ VV +L Sbjct: 61 EIIFDFFLKLHSLNIPSVVISGNHDSYEFMKSLKKLLQVIDVYVVPKPNLEECVL----D 116 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 G + +P+ P + + ++AG + L+ Y + DA PL ++ Sbjct: 117 VKGLKIACLPY--PSERVLTRAGEDSKLSYAVLVEKAIKYLYEKVKDA-------PLKVL 167 Query: 181 ATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPA-DYIALGHIHRAQII-GGMEHVRYC 238 + HL G+ + R+ I A P DY+ALGH+HR Q I HV Y Sbjct: 168 LS-HLFIAGSKYTRTEREATITDYYAVEPSAIPEGFDYVALGHVHRYQRIEKAPTHVYYT 226 Query: 239 GSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRD 298 GS L F E G+ K+ + V G+ VE + + + P+ + + + +LE+ +D Sbjct: 227 GSLFQLDFSEAGQEKFFNFVELKEGEPPHVEAIKLSLKNPLHTFEINQENYAKELEKIKD 286 Query: 299 VSQEPPVWLDIEITTDEYLHDIQRKI-QALTESL-PVEVL-----LVRRSREQRE 346 V V L ++ T +H + K+ +AL E L +E+L + +R E+RE Sbjct: 287 VQGYIKVHLIVKDKTK--MHLVAEKVKEALGEKLIKLELLTPEEAIKKRLEEERE 339 >UniRef50_D1PAG0 Nuclease SbcCD, D subunit n=1 Tax=Prevotella copri DSM 18205 RepID=D1PAG0_9BACT Length = 481 Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 82/276 (29%), Positives = 128/276 (46%), Gaps = 42/276 (15%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+IL TSDWHLG F+ R EH+ FL WLLE + DA+++AGD+FD G+P + A+ Sbjct: 47 MKILATSDWHLGNLFHGNDRLPEHKHFLKWLLEQIAEQKPDALLIAGDIFDNGNPSAAAQ 106 Query: 61 TLYNRFVVNLQQT--GCHLVVLAGNHDSVATLNESRDIMAFLNTTVVA------------ 106 T+Y F+ + Q +++ AGNHDS + L R ++ + + Sbjct: 107 TVYYEFLADATQLCPNMQVIITAGNHDSASRLEAPRPLLTRYHVEIRGNVRKIWKQGESE 166 Query: 107 ----SAGH-----APQILP-RRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAA 156 + GH I+P + ++ +PFLR D++ + + G+ L Sbjct: 167 DDDKTGGHWIYSFDDLIIPVTNEAGEEVIILAVPFLRS-DVVQNASYSQGV---NDFLRE 222 Query: 157 ITDYYQQHY-ADACKLRGDQPLPIIATGHLTTVGA--SKSDAVRDIYIGTLDAFPAQNFP 213 +T +Q Y C I H+ G+ +K DA I IG + + + Sbjct: 223 LTAEARQKYPGRKC----------IMMAHMYAKGSDIAKKDASEKIIIGGQEEVDLEGWN 272 Query: 214 P-ADYIALGHIHRAQIIGGMEHVRYCGSPIPLSFDE 248 DY+ GHIH+ Q I + RY GS +P+SF E Sbjct: 273 DHPDYMTCGHIHKRQHIWNTDWARYTGSILPMSFAE 308 >UniRef50_Q0S486 ATP-dependent dsDNA exonuclease SbcD n=6 Tax=Actinomycetales RepID=Q0S486_RHOSR Length = 394 Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 102/329 (31%), Positives = 153/329 (46%), Gaps = 17/329 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHTSDWH+G+ F+ + LD + H VD ++V GDV+D P + A Sbjct: 1 MRILHTSDWHIGRTFHGVDLLTDQARVLDAIAALVAEHGVDVVVVPGDVYDRSIPSADAV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNE----SRDIMAFLNTTVVASAGHAPQILP 116 T+ NR ++ G +V +GNHDS A L SR L TTV +P +L Sbjct: 61 TVCNRGFEAIRDAGAVIVATSGNHDSAARLGAGAAFSRAGGLHLMTTVAGIG--SPVVLD 118 Query: 117 RRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQP 176 G IP+L P +I +Q + +L A D D G + Sbjct: 119 DEHGP--VAFYGIPYLEP-EITRAQLDVPTARSHAEILDAAMDRVCADL-DGRNDTGPRT 174 Query: 177 LPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVR 236 ++ H VGA + + R I +G ++ A F DY+ALGH+H Q + E++R Sbjct: 175 RSVV-LAHAFVVGAEATGSERSISVGGVETVSASAFGGVDYVALGHLHSPQTLA--ENIR 231 Query: 237 YCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQW 296 Y GSP+P SF E SK V+LV L +VE +++PV + + L G + + + + + Sbjct: 232 YSGSPLPYSFGERTHSKAVYLVDLDADGLRAVERVDLPVVRGLRQLTGTVQELL-EDDTF 290 Query: 297 RDVSQEPPVWLDIEITTDEYLHDIQRKIQ 325 RD ++ +T E D R +Q Sbjct: 291 RDAED---CYVSAVLTDPERPVDAMRSLQ 316 >UniRef50_Q0K4S8 DNA repair exonuclease, SbcD n=6 Tax=Bacteria RepID=Q0K4S8_RALEH Length = 395 Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 106/396 (26%), Positives = 176/396 (44%), Gaps = 32/396 (8%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 +R LHT+DWHLG+ F+++S + LD +E +T + DA+++AGDV+D PP A Sbjct: 14 LRFLHTADWHLGRLFHARSLLEDQAHILDQFVELVRTERPDAVLIAGDVYDRAVPPPEAV 73 Query: 61 TLYN----RFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILP 116 L + R V++ TG +V++AGNHDS L +M V A + Sbjct: 74 ALLDDVLGRIVID---TGVPVVMIAGNHDSAQRLGFGARLMRAQGLHVAGRTLAAAACVT 130 Query: 117 RRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQP 176 D + +P+ P ++ G + + L A + DA + Sbjct: 131 LHDTHGEVRIYALPYAEPA-VVRDAMGTDLPSHEAALRAQL---------DAIRAVHPPG 180 Query: 177 LPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVR 236 + + GH VG + S++ R + +G A A F D +ALGH+HR Q +GG V Sbjct: 181 VRAVVVGHAFVVGGAASESERPLSVGGSGAVAADLFAGFDLVALGHLHRPQTLGG-GRVH 239 Query: 237 YCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQW 296 Y GS + S EC K V + ++ + + + + V++G+LA++ L Sbjct: 240 YAGSLLKYSLSECAHDKSVSRIELGADGAVAITPVPLQALRDVRVVEGELAAV---LAAG 296 Query: 297 RDVSQEPPVWLDIEIT-TDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRE 355 D Q ++ +T T L + R Q +L +E ++ R+ AS+ Sbjct: 297 VDDPQRDD-YIHARLTDTGALLDPMARLRQVYPNALAIERTVLARTGT------ASEAGR 349 Query: 356 TLSELSVEEVFN---RRLALEELDESQQQRLQHLFT 388 L +L E+F R +A EL+ Q+ L + T Sbjct: 350 KLRQLGTGELFANFFREVADAELEPDQRAVLDQVLT 385 >UniRef50_B3JFY8 Putative uncharacterized protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JFY8_9BACE Length = 418 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 98/363 (26%), Positives = 162/363 (44%), Gaps = 53/363 (14%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 ++IL TSDWHLG F+ R+ EH FL WLL DA++V+GD+FD+ +P + ++ Sbjct: 2 IKILATSDWHLGNTFHGFDRQEEHADFLRWLLGAVGQKNPDALLVSGDIFDSSNPSAASQ 61 Query: 61 TLYNRFVVNLQQTGCHL--VVLAGNHDSVATLNESRDIMA-----------------FLN 101 LY F+ L Q L +++AGNHDS A L R ++ FL Sbjct: 62 ELYYSFLDTLTQRFPQLQTIIIAGNHDSAARLEAPRLMLERHRVYVRGLIRGQEEGNFLP 121 Query: 102 TTV---VASAGHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAIT 158 + V SA H + A + +P+LR D + G+ + Sbjct: 122 DDLLLPVCSAAHPEE---------RAWVLAVPYLRDGDFTRGMSYGEGVGE--------- 163 Query: 159 DYYQQHYADACKLRGDQPL-PIIATGHLTTVGAS-KSDAVRDIYIGTLDAFPAQNFPPAD 216 + + +A LR D+ +I HL G+ ++ I IG + + Sbjct: 164 --FLRRAVEAANLRRDRSREALILMAHLYATGSEVAENSSERIVIGGSEMVSLDEIDESV 221 Query: 217 YIA-LGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESV-ENLNVP 274 +A LGH+HR Q + G E+ Y GS +P+SF E G +G+L V E L+ P Sbjct: 222 TLALLGHLHRNQKVSGRENWLYPGSALPMSFAEKGYCHGAVYYEIEDGRLNGVSEFLDYP 281 Query: 275 VTQPMAVLKGDLASITAQLEQWR------DVSQEPPV-WLDIEITTDEYLHDIQRKIQAL 327 + P+ + + L+ R +S+E PV +L++ + D + I ++++ + Sbjct: 282 LQHPLVSVPAKPLPLAEVLDLLRALPDKDKMSEEEPVPYLEVNVLLDAPVAGINKQVEDV 341 Query: 328 TES 330 +S Sbjct: 342 LQS 344 >UniRef50_B7AP64 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AP64_9BACE Length = 399 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 105/413 (25%), Positives = 185/413 (44%), Gaps = 46/413 (11%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR H SD H+G+ + +S + + L ++E + + DA+I+AGDV+D P + A Sbjct: 7 MRFFHMSDLHIGKQLHERSLLDDQRHVLTRVVEYVREYSPDAVIIAGDVYDKSLPSAEAV 66 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVA----SAGHAPQILP 116 T+++ F+VNL TG +++++GNHDS LN I N V ++G + + Sbjct: 67 TVFDDFIVNLADTGTTVMLISGNHDSAERLNYGSRIFTKSNIHVAGMPPRNSGDHLKSVV 126 Query: 117 RRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQP 176 +D +PF++P + G+ ++ + A TD D C Sbjct: 127 LKDEYGEVTFWLMPFIKP-------GYVKGVFADENAVGASTD----AVGDCCSSYDSAV 175 Query: 177 LPIIATGHLT-------------TVGA---SKSDAVRDIYIGTLDAFPAQNFPPADYIAL 220 +IA ++ T G S++D+ I +G +D DY AL Sbjct: 176 HAVIARENIDYSERNVIVSHQFYTNGQTQPSRTDS-ETISVGGIDNVDVSAVKDFDYAAL 234 Query: 221 GHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFS-NGKLESVENLNVPVTQPM 279 GHIHR Q + G ++VRYCG+ + S E +K + +V GK + L + + Sbjct: 235 GHIHRGQKV-GYDYVRYCGTMLKYSVSEREDNKALLMVDMKEKGKPAEITELKLDALHDV 293 Query: 280 AVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLP-VEVLLV 338 ++KG I + Q+ D + V + + TDE +++ Q L + P + + V Sbjct: 294 RLIKGKFDEI---VRQYSDKNTNDYVSV---VLTDE--NEVYNARQTLIDIFPNLLSVSV 345 Query: 339 RRSREQRERVLASQQRE-TLSELSVEEVFNRRLALEELDESQQQRLQHLFTTT 390 SR RE V +L EL E F RR+ ++ + +++ ++ + + Sbjct: 346 DNSRTNREYVEEYDDVNVSLDELFAE--FFRRMQGRDMSDDERRAMEDVINIS 396 >UniRef50_C9LQV4 Putative exonuclease SbcD n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQV4_9FIRM Length = 389 Score = 117 bits (293), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 77/259 (29%), Positives = 120/259 (46%), Gaps = 16/259 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFL-DWLLETAQTHQVDAIIVAGDVFDTGSPPSYA 59 M+ +HT+DWHLG+ FY + E + L + L + D I++AGDV+D PP+ A Sbjct: 14 MKFIHTADWHLGKLFYGEYLTEEQEWILKNQFLPLIDEEKPDVILLAGDVYDRSVPPAEA 73 Query: 60 RTLYNRFVVNLQ-QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA--PQILP 116 L++ V + + +V++GNHDS L+ + I+ + H P +L Sbjct: 74 VELFDEMVSEITGKRKIPFIVISGNHDSAERLSFASRILRGTGLFLCGDLYHTLEPVVLK 133 Query: 117 RRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQP 176 DG P+P+ P + +A + + ++D+ + A + Sbjct: 134 DDDGE--VAFAPLPYAEPGKV--REALSADVHTHEEAERVLSDFLLRQIGHAARK----- 184 Query: 177 LPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVR 236 +A H G S SD+ R + IG D A F P +Y ALGH+H Q GG E+VR Sbjct: 185 ---VAIAHEFVAGGSASDSERPLSIGGTDLISADIFAPYNYTALGHLHGPQQAGGKENVR 241 Query: 237 YCGSPIPLSFDECGKSKYV 255 Y GS + SF E + K V Sbjct: 242 YSGSLLKYSFSEATQKKGV 260 >UniRef50_B2GFI3 Nuclease SbcCD subunit D n=1 Tax=Kocuria rhizophila DC2201 RepID=B2GFI3_KOCRD Length = 407 Score = 117 bits (293), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 97/341 (28%), Positives = 152/341 (44%), Gaps = 42/341 (12%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M +LHTSDWHLG+ F+ + ++ + + V ++V+GDV+D P + Sbjct: 1 MLMLHTSDWHLGRTFHGVDILDVQARAMTEIVAWVREYDVSVVLVSGDVYDRAQPRTEVV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA--PQILPRR 118 L NR + +++ G +V+ +GNHDS A L IM+ ++ + A P + +R Sbjct: 61 ELLNRTLGEIREAGAQVVLTSGNHDSPARLGFGSQIMSHGGVHLLTTLEDAWRPALFTQR 120 Query: 119 DG----TPGAV--------------------LCPIPFLRPRDIITSQAGLNGIEKQQHLL 154 DG + GAV + IP+L PR + L+ Q +L Sbjct: 121 DGRLTVSRGAVPAGEPSAGSPVAAAEDTTVAVYGIPYLEPR---AAAPLLDCAPTHQGVL 177 Query: 155 AAITDYYQQHYADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPP 214 A+T A R +P + H GA +D+ R + G L A+ F Sbjct: 178 GAVT-------ARIDDARNRPGVPTVVMAHAFVTGAEPTDSERVVDSGGLGTASAEIFAG 230 Query: 215 ADYIALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVP 274 DY ALGH+HR Q + +E VRY GSP+ SF E SK LV + + V L+ Sbjct: 231 HDYTALGHLHRRQRV--IETVRYSGSPVAYSFSEAEHSKGAWLVDVRSDGVHGVTPLDHA 288 Query: 275 VTQPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDE 315 +A L+G L ++ + E R +Q+ W + +T E Sbjct: 289 SGMRLARLRGQLDALLTEPEHTR--AQD--AWCQVVLTDAE 325 >UniRef50_C2M1T3 Nuclease SbcCD, D subunit n=3 Tax=Bacteroidetes RepID=C2M1T3_CAPGI Length = 409 Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 103/363 (28%), Positives = 158/363 (43%), Gaps = 68/363 (18%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHT+DWHLG+ SR E +A ++ +++ A +VD +IVAGD+FD +P + A Sbjct: 3 MKILHTADWHLGKRLDRFSRIEEQRAVMEEIVQIANDQKVDMVIVAGDLFDNFTPNTDAV 62 Query: 61 TLYNRFVVNLQQTGCH----LVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILP 116 L+ + L+Q C +V ++GNHDS ++ AP L Sbjct: 63 ELFYK---TLKQLSCEGKRPIVAISGNHDSPKLID-------------------APDPLA 100 Query: 117 RRDGT-----PGAVLCPIPFLRPRDIITSQAGL--NGIEKQQHLLAAITDYYQQHYADAC 169 R G P A++ PI +I TS+ G EK + L + Y Sbjct: 101 RECGIFLIGYPNAIVSPIK-AETFEITTSEEGFLEFCFEKYPYPLRILHTPYANEPRLKQ 159 Query: 170 KLRGDQPLPI----------------------IATGHLTTVGAS-----KSDAVRDIYIG 202 +L GD+ + + I T HL + + + R I IG Sbjct: 160 ELEGDKQVSLSQLLSDKWHFLANTYCDSSGVNILTAHLFMQPKNGETLEEPEGERPIRIG 219 Query: 203 TLDAFPAQNFPP-ADYIALGHIHRAQIIGGMEH-VRYCGSPIPLSFDECGKSKYVHLVTF 260 D PP Y ALGH+H + IG E+ V Y SP+ SF E G+ KYV +V Sbjct: 220 NADMIYTDTIPPQIQYTALGHLHGFKNIGSEENPVVYASSPLSYSFSEAGQQKYVVVVEV 279 Query: 261 SNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDI 320 + + S E +P+TQ + + ++ LE R + P W+++ + EYL Sbjct: 280 TPDQRPSFE--KIPLTQGKPLARKSFDNVPLALEWLR---ENPNTWVELTLELKEYLKAQ 334 Query: 321 QRK 323 +RK Sbjct: 335 ERK 337 >UniRef50_B8D1T4 Exodeoxyribonuclease I subunit D n=3 Tax=Clostridia RepID=B8D1T4_HALOH Length = 435 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 92/346 (26%), Positives = 153/346 (44%), Gaps = 50/346 (14%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 +RILHT+DWHLG++ SR E + F++ ++E A ++VD +++ GD+FDT +PP+ A Sbjct: 27 LRILHTADWHLGKHLEGWSRYEEQKEFVEEIIEIADDNKVDMVLICGDIFDTTNPPAEAE 86 Query: 61 TLYNRFVVNLQQTGCHLVVL-AGNHDS---------------VATLNESRDIMAFLNTTV 104 L+ + + L + G ++ L +GNHDS + ++E R L+ Sbjct: 87 QLFFQAMDYLSKGGERVICLISGNHDSPNRLMAPGPLASRQGIFIMDEPRGDRYKLDDDR 146 Query: 105 VASAGHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGI-----------EKQQHL 153 V + G + G VL +P+ S++ LN + E Sbjct: 147 VLNRGQG--YIELEINGEGVVLTALPY-------PSESRLNQVFSWTGDDRAVQESYSRR 197 Query: 154 LAAITDYYQQHYADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYI-GTLDAFPAQNF 212 + I + +Q+Y + IA HL G + + R I + G+L P Sbjct: 198 VGQIFSHLEQYYRENT--------INIAMSHLFVAGGQTTRSERPIQVGGSLTVLPEHLP 249 Query: 213 PPADYIALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLN 272 + Y ALGH+HR QI Y GSP+ S E K V+LV G+ +E + Sbjct: 250 EKSQYTALGHLHRYQIASSARRAYYSGSPLQYSLSEKDHKKCVNLVELHPGEEARIEQVE 309 Query: 273 VPVTQPMAVLKGD-LASITAQLEQWRDVSQEPPVWLDIEITTDEYL 317 + +P+ V + + + +E +D S VW + I D+ L Sbjct: 310 LTTKKPIEVWEAEGVEEAIKMVEANKDRS----VWAYLYINVDKTL 351 >UniRef50_C0W8J2 DsDNA exonuclease subunit n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W8J2_9ACTO Length = 441 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 96/344 (27%), Positives = 145/344 (42%), Gaps = 62/344 (18%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHTSDWHLG+ F+ + + H F D L+E + VDA+++AGDV+D PP+ + Sbjct: 1 MRILHTSDWHLGRTFHGRVLDDAHATFADHLVELVEAESVDAVVIAGDVYDRAIPPTDSV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA----PQILP 116 L N + L +V+ GNHDS L A ++ A A P I+P Sbjct: 61 RLLNDTLNRLTDR-TQVVLAPGNHDSAQRLGFGS---ALFRPSLAVRAQVAEVDQPVIVP 116 Query: 117 RRDGTPGAVLCPIPFLRP---RDIIT----------------SQAGLNGIEKQQHLLAAI 157 DG G ++ +P+L P R ++ S+ G A + Sbjct: 117 DPDGGDGLLVYALPYLDPDATRGVLPALLSERTGEVWADPEDSEEPAAGEPAGPPQPARL 176 Query: 158 TDYYQQHYADACKLRGDQ----------PLPIIATGHLTTVGASK-SDAVRDIYIGTLDA 206 ++ + A +L G +P++ H VG D+ RDI +G +D+ Sbjct: 177 ARSHEAVVSGALRLVGQDLARRRAASRTRVPVVVMAHAFVVGGQACEDSERDIRVGGVDS 236 Query: 207 FPAQNFPP------------ADYIALGHIHRAQII--------GGMEHVR----YCGSPI 242 P++ F DY+ALGH+HR Q I G R Y GSP+ Sbjct: 237 VPSEVFETLGGSAVADSSGGLDYVALGHLHRPQEIHLPQRPSAGSGASARPRLVYSGSPL 296 Query: 243 PLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDL 286 P SF E K LV + + +E + PV + + G + Sbjct: 297 PFSFSEAPWPKSSVLVDLTAEGVTRLERIPTPVAHRIETVTGTM 340 >UniRef50_A6TVN1 Nuclease SbcCD, D subunit n=6 Tax=Clostridiaceae RepID=A6TVN1_ALKMQ Length = 406 Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 95/356 (26%), Positives = 158/356 (44%), Gaps = 38/356 (10%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLG+ SR AE + FL+ L+ ++D I+VAGD++DT +PP+ A Sbjct: 1 MKILHTSDWHLGKTLEGNSRLAEQERFLEELVTIVNEKEIDLILVAGDIYDTSNPPAQAE 60 Query: 61 TLYNRFVVNLQQTGCH-LVVLAGNHDS---------------VATLNESRDIMAFLNTTV 104 L+ V L G ++++AGNHD+ V L + + I+ Sbjct: 61 RLFYDSVKKLSANGQRPIIIVAGNHDNPDRLVAASPLAYEHGVVLLGKPKSIVEIGKYGT 120 Query: 105 VASAGHAPQILPRRDGTPGAVLCPIPF---LRPRDIITSQAGLNGIEK--QQHLLAAITD 159 L V+ +P+ R ++++ + + K + ++ Sbjct: 121 FEIVDSGEGFLEIDLKGERVVILTLPYPSEQRLNELLSEELAEDARRKSYSARIGEIFSN 180 Query: 160 YYQQHYADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPP-ADYI 218 ++H D L A HL +G + + R I +G A + P A Y+ Sbjct: 181 LSEKHREDTINL---------AISHLFVMGGEEVGSERPIQLGGSLTVDANHLPQRAHYV 231 Query: 219 ALGHIHRAQIIGGMEHVR--YCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVT 276 ALGH+H+ Q + G ++ Y GSPI S E SK V++V + G VE + + Sbjct: 232 ALGHLHKPQKVVGSGKIKAYYSGSPIEYSKKEVHYSKSVYVVEVNLGLDTKVEEVYLKNY 291 Query: 277 QPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLP 332 +P+ V K I L + + E +W+ +EI TD + Q +I+ + + P Sbjct: 292 KPIEVWK--CKGIKEALIRCEE-DGERDIWVYLEIQTDRVM--TQSEIKEMKKLRP 342 >UniRef50_C8XKJ7 Nuclease SbcCD, D subunit n=2 Tax=Actinomycetales RepID=C8XKJ7_NAKMY Length = 388 Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 87/311 (27%), Positives = 147/311 (47%), Gaps = 24/311 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ LHT+DWH+G+ +SR E +A + ++ A+ HQ+DA+++AGD++D+ +P + A+ Sbjct: 1 MKFLHTADWHVGKTLKGRSRLDEQRAVIGQIVGYAREHQIDAVLIAGDLYDSSAPTADAQ 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVV-----ASAGHAPQIL 115 L + ++ L+ TG ++ +AGNHDS AT + R ++ ++ T+V A+ G Sbjct: 61 QLVVQALLALRDTGAKVLAIAGNHDSAATFDAYRPLLDAVDITLVGRVRPAARGGVVSFD 120 Query: 116 PRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACK----- 170 R G V +PFL R + + L+A+ + Y + Sbjct: 121 ARSTGERVNVAV-LPFLSQRYAV----------RAAQLVASTPSEMSRDYDAMVREVIDS 169 Query: 171 -LRGDQPLPI-IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPP-ADYIALGHIHRAQ 227 G P + + HLT VG + R PA FP A Y+ALGH+HR Q Sbjct: 170 LAAGFTPDAVSVMMAHLTVVGGTFGGGERAAQSIFEYHVPAVAFPAHAHYVALGHLHRRQ 229 Query: 228 IIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLA 287 + V Y G+P + F E + V LV S ++ +L + + + + G A Sbjct: 230 TLPAPAPVVYSGAPFAVDFGEQDNTSVVCLVQASPSTPATITDLPITAGRRLRTVHGTAA 289 Query: 288 SITAQLEQWRD 298 I + E++ D Sbjct: 290 EIVGRAEEFGD 300 >UniRef50_A8L1U9 Nuclease SbcCD, D subunit n=2 Tax=Actinomycetales RepID=A8L1U9_FRASN Length = 387 Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 114/396 (28%), Positives = 183/396 (46%), Gaps = 46/396 (11%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ LHTSDWHLG+ ++R E +A L ++ A+ H+VDA++VAGDV+D+ +PP+ A+ Sbjct: 1 MKFLHTSDWHLGKTLKGRNRLDEQRAVLGEIIGIARKHEVDAVLVAGDVYDSAAPPAAAQ 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVA---SAGHAPQILPR 117 L + +V L+ TG +VV+AGNHD T + R +M+ T+V +A + R Sbjct: 61 QLAVQALVALRGTGAEVVVIAGNHDHQPTFDAYRPLMSAAGITLVGTPRTAADGGVVTFR 120 Query: 118 RDGTPGAV-LCPIPF------LRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACK 170 GT V + +PF +R D++T Q + A + +A Sbjct: 121 APGTGEPVTVAALPFVSQRYAVRAADLVTQTPDQTAARYDQVVRALMEQLRSGFDDNAVN 180 Query: 171 LRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIG 230 L + T L G + ++ + ++ + AFPA A Y+ALGH+HR Q + Sbjct: 181 LVLAH---LTVTNGLFGGGERMAQSIFEYHV-SAAAFPAD----AHYVALGHLHRRQTLA 232 Query: 231 GMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASIT 290 V Y G+P+ + F E + V LV S G V ++ + + + ++G +A + Sbjct: 233 APCPVVYSGAPLAVDFGEQENTNVVCLVEASPGVPAQVTDIALTAGRRLRTVRGTVAELA 292 Query: 291 AQLEQ-----WRDVSQEP-------------PVWLDIEITTDEYLHDIQRKIQALTESLP 332 AQ + R V +EP P L++ I D + ++ AL S P Sbjct: 293 AQAPELAEDLLRVVVREPARAGLRDEVQELLPNALEVGI-------DPELRV-ALGGSRP 344 Query: 333 VEVLLVRRSREQRERVLASQQRETLSELSVEEVFNR 368 L RRS E R + E + VE +F R Sbjct: 345 SAAALARRSPEDLFREFCAA--EQFEDPRVEALFAR 378 >UniRef50_Q07GQ3 Exonuclease SbcD, putative n=1 Tax=Roseobacter denitrificans OCh 114 RepID=Q07GQ3_ROSDO Length = 381 Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 79/284 (27%), Positives = 126/284 (44%), Gaps = 21/284 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR+LHT+DWHLG+ S + LD + + V+ +++AGDV+D SP A Sbjct: 1 MRVLHTADWHLGKTLRGVSLHEDQAHVLDQVFKAVVEEGVEVLLIAGDVYDKASPSEAAM 60 Query: 61 TLYNRFVVNL-QQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVA--SAGHAPQILPR 117 LY+ F+ + +QT +VV+AGNHDS L + + V P IL Sbjct: 61 KLYSDFLERVHEQTDAAIVVIAGNHDSGQRLGTASKLFDRRRILVRGPIERDETPLILED 120 Query: 118 RDGTPGAVLCPIPFLRPRDIITSQAGLNG--IEKQQHLLAAITDYYQQHYADACKLRGDQ 175 G + +P+ +I +++ I + +L A + + D + Sbjct: 121 EHGK--IAISALPY---GEIYSARRAFEAEDIRSPEDVLRAQIEAARARVPDDARW---- 171 Query: 176 PLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHV 235 + H ++ R + +GT++ A F A+Y+ALGH+HR Q GG + Sbjct: 172 ----VVVAHAFVTNCQPTETERRLSVGTVETVSAAIFEGANYVALGHLHRPQTAGG-NAI 226 Query: 236 RYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPM 279 RY GSP+ FDE G +K + F V NL +P+ Sbjct: 227 RYSGSPLAFGFDEAGTTK--SMTVFDLDGQGQVVNLKTVDFEPL 268 >UniRef50_D0L9F6 Nuclease SbcCD, D subunit n=5 Tax=Actinomycetales RepID=D0L9F6_GORB4 Length = 407 Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 91/290 (31%), Positives = 132/290 (45%), Gaps = 18/290 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRI+HTSDWHLG+ F+ + + L L Q DA++VAGDV+D P + A Sbjct: 1 MRIVHTSDWHLGRTFHGVELLDDQRRALAELAAIVGEEQADAVVVAGDVYDRSVPSADAV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMA----FLNTTVVASAGHAPQILP 116 Y+ + + TG +VV +GNHDS L A L TT+ A P + Sbjct: 61 AAYDEGLAAIAATGAAIVVTSGNHDSATRLGSGSAFAAAGGLHLRTTI--GAIDQPVMFD 118 Query: 117 RRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQP 176 DG P A+ IP+L P D + G+ +L+A D + A Sbjct: 119 ADDG-PVAIY-GIPYLEP-DTARTTLGVGTARGHAAVLSAAMDRIRADAARRSAR----- 170 Query: 177 LPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVR 236 + H VGA+ + + R I +G ++ PA F DY+ALGH+H Q + + VR Sbjct: 171 --TVVAAHAFVVGAAATGSERSISVGGVETVPAHIFSGVDYVALGHLHSPQQL--TDTVR 226 Query: 237 YCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDL 286 Y GS +P SF E K V +V + V + + ++ LKG L Sbjct: 227 YSGSLLPYSFGERSHRKSVWVVDLDADGVREVRARELRGVRGLSCLKGTL 276 >UniRef50_A0LM47 Exodeoxyribonuclease I subunit D n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LM47_SYNFM Length = 383 Score = 111 bits (277), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 80/297 (26%), Positives = 138/297 (46%), Gaps = 21/297 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHT+DWHLG+ F+ A+ LD L+ A + D ++V+GDV+D PP A Sbjct: 1 MRILHTADWHLGRIFHGVHLTADQAFVLDRLVRLASESKPDVVLVSGDVYDRAVPPPDAV 60 Query: 61 TLYN----RFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMA--FLNTTVVASAGHAPQI 114 L + R V+ L+ ++++AGNHDS L+ ++A L+ + P + Sbjct: 61 ALLDDTLSRLVLGLRIP---VILIAGNHDSPERLSFGSKVLAAQCLHLAGTPAPDATPVV 117 Query: 115 LPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGD 174 + R G C +P+ P ++ + + +AA + ++ + Sbjct: 118 IDDRHGP--VSFCSLPYAEPA-LVRERLDRKDVVDHDSAMAAQIESARRRLPAGSR---- 170 Query: 175 QPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEH 234 + H G +S++ R + +G A ++F Y ALGH+HR Q G +H Sbjct: 171 ----AVLVAHAFVAGGIESESERSLSVGGAAAVGVEHFEGFHYAALGHLHRPQ-RAGADH 225 Query: 235 VRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITA 291 V+Y GS + SF E G++K V+LV +VE + + + + ++G + A Sbjct: 226 VQYAGSLLCYSFAEAGQTKSVNLVELDAAGRCAVERIPLAPSHEVRCIRGAFRELLA 282 >UniRef50_B5I7A7 Exonuclease n=3 Tax=Actinomycetales RepID=B5I7A7_9ACTO Length = 399 Score = 111 bits (277), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 40/331 (12%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR LHTSDWHLG+ F+++ +AFLD L+ TA+T VDAI+VAGD++D P A Sbjct: 1 MRFLHTSDWHLGRRFHTEDLIPAQRAFLDHLVGTARTEDVDAILVAGDIYDRAIPSLDAV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIM--AFLNTTVVASAGHAPQILPRR 118 L+NR + L +++++GNHDS L ++ A ++ P +L Sbjct: 61 RLFNRALHQLADLDVPIIMISGNHDSAHRLGVGSGLLARAGIHLRTDPDTCDIPVLLEDA 120 Query: 119 DGTPGAVLCPIPFLRP---RDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQ 175 DG P AV IP+L P RD + ++A + + L AA+ + L +Q Sbjct: 121 DG-PVAVYG-IPYLEPSMVRDRLEAEA----VSHRAVLTAALDRIH-------ADLTNNQ 167 Query: 176 PL---PIIATGHLTTVGASK---------SDAVRDIYIGTLDAFPAQNFPPADYIALGHI 223 P ++ T G + S + R+I +G + A F DY+ALGH+ Sbjct: 168 PAGTRSVVLAHAFVTSGTGQPEERDESEESTSEREIAVGGVAHVGADVFAGIDYVALGHL 227 Query: 224 HRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLK 283 H Q + + + Y GSP+ SF E +K V LV + + ++ PV + + Sbjct: 228 HGPQRV--TDRIHYSGSPLAYSFSEARHTKSVTLVDLTPNAVPALARQPCPVPLRLERVS 285 Query: 284 GDLASITAQLEQWRDVSQEP--PVWLDIEIT 312 G + + + EP WL++ +T Sbjct: 286 GFMEDLLTNPD------HEPLKDAWLEVTLT 310 >UniRef50_D1PQD5 Exonuclease SbcD n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQD5_9FIRM Length = 376 Score = 110 bits (276), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 85/298 (28%), Positives = 134/298 (44%), Gaps = 24/298 (8%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ LH +D HLG+ + + L+ +L H V+A+++AGD++D PP+ A Sbjct: 1 MKFLHLADLHLGKRVNGFDLLEDQRFILEQVLALCDEHDVEAVLLAGDIYDAPVPPASAC 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ--ILPRR 118 TL + F+ L ++ +AGNHDS L+ + ++A + AP+ +L R Sbjct: 61 TLLDWFLTQLAGRRIPVLAIAGNHDSAERLDFAAGLLAAQGVHLAGRFTGAPRQIVLNDR 120 Query: 119 DGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLL--AAITDYYQQHYADACKLRGDQP 176 G L +PF+R + +H L A + DY A + P Sbjct: 121 HGPVEFTL--LPFVRAATV-------------RHFLPDADLPDYDSAVAAALGACQPAAP 165 Query: 177 LPIIATGHLTTVGAS----KSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGM 232 ++ + G + +GT+D+ A F Y ALGHIHRAQ +G Sbjct: 166 RRVLLAHQMVVAGVCPPQLSGSETAPLTVGTVDSIDASRFDGFAYAALGHIHRAQRVGS- 224 Query: 233 EHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASIT 290 + VRY G+P+ DECG K V LV +E ++ L + + M L G LA +T Sbjct: 225 DTVRYAGAPLCYHLDECGTEKSVTLVDLGRRGVEDIQLLPLIPRRAMRHLTGPLAKLT 282 >UniRef50_D1NTD7 Putative nuclease SbcCD, D subunit n=1 Tax=Bifidobacterium gallicum DSM 20093 RepID=D1NTD7_9BIFI Length = 440 Score = 110 bits (276), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 98/350 (28%), Positives = 154/350 (44%), Gaps = 47/350 (13%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR+LHTSDWH+G+ F LDWL++T + VD + V+GD++D P + A Sbjct: 1 MRMLHTSDWHIGRRFKGMDLLDYQTRVLDWLIDTIECEHVDVLCVSGDIYDLPRPGADAV 60 Query: 61 TLYNRF---VVNLQQTG--CHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQIL 115 ++++ + LQ G H+V+ GNHDS A L ++ N + + + + Sbjct: 61 RVFDQAYERLGALQVNGHALHVVMTPGNHDSAARLGVGSRLLRE-NVHMRCDLAYIGEPV 119 Query: 116 PRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLR-GD 174 G ++ +P+L P A L G + A + + +AD + R D Sbjct: 120 DIAVGGQRLLIYALPYLNPDASRGMLAKLAGHDVACSHAAVMQAALELVHADLERRREQD 179 Query: 175 QPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPA--DYIALGHIHRAQ----- 227 +P + H GA +SD+ R I +G +D+ PA F + DY+ALGH+HR Q Sbjct: 180 HDVPAVLMAHTFVSGAEQSDSERGIAVGGIDSVPASMFSTSGLDYLALGHLHRPQRVTIP 239 Query: 228 IIGGMEH---VRYCGSPIPLSFDE------CGKSKYVHLVTFSNGK---------LESVE 269 + G H RY GS + SF E G K V +V F + LE E Sbjct: 240 VTGDAMHTPIARYSGSLLAYSFSERTVPPRLGNGKQVVIVDFEHATGNVPHNTDVLEDAE 299 Query: 270 NLNVPVTQPMAVLKGDLASITAQLEQWR--DVSQEPPVWLDIEITTDEYL 317 + N P + A++ + R DV + P + + T DE + Sbjct: 300 DRNEP-------------PVAARVRRVRTLDVQSDEPALVQVSGTPDELI 336 >UniRef50_C3WDH5 Nuclease SbcCD n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WDH5_FUSMR Length = 407 Score = 110 bits (275), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 101/346 (29%), Positives = 153/346 (44%), Gaps = 41/346 (11%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLG+ R E + F+D L + I++AGD+FDT SP S A Sbjct: 1 MKILHTSDWHLGKKLEGAKRIEEQKLFIDTLEKIVTDENPKLILIAGDIFDTPSPSSEAE 60 Query: 61 TLYNRFVVNLQQTGCH-LVVLAGNHDS----VATLNESRD--IMAFLNTTVVASAGHAPQ 113 L+ + + G +V++ GNHDS VA+ N ++D I+ + N V G Q Sbjct: 61 KLFFDAMKKISNFGKRAIVIIPGNHDSAERLVASKNLAKDFGIIIYENPLEVKEIGEYGQ 120 Query: 114 ILPRRDGTPGAVLCPIP----FLRPRDIITSQAGLNG------IEKQQHLLAAIT-DYYQ 162 R T G ++ I FL + S+A L+ +EK++ L +I D Sbjct: 121 FQVER-ATEGGLILNIEGERVFLYSLPYV-SEAYLDEMYKNVLVEKEEELGESIDGDLTY 178 Query: 163 QHYADACKLRG-----DQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADY 217 A RG + +P I HL +G+ R+ +G + P DY Sbjct: 179 SEKIGALLKRGVVEVESENIPKIIMAHLFIMGSVGDGDEREAELGGSKGVDLDDLPEVDY 238 Query: 218 IALGHIHRAQIIGGMEHVR----YCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNV 273 IALGHIH+ M++ R Y GSPI E K + L ++ + + Sbjct: 239 IALGHIHKP-----MKYSRKRACYSGSPIEYRVTENRYKKKIFLADVKGDLDTEIKEIEL 293 Query: 274 PVTQPMAVLKGDLASITAQLEQWRDV--SQEPPVWLDIEITTDEYL 317 +P+ K ++ I LE + + QE W+ ++I TD YL Sbjct: 294 ENYKPIK--KYEVKGIDKALELSQSLVGVQE---WIYLKIVTDRYL 334 >UniRef50_C3NXC1 Exonuclease SbcD n=22 Tax=Vibrio RepID=C3NXC1_VIBCJ Length = 379 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 92/306 (30%), Positives = 141/306 (46%), Gaps = 39/306 (12%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ LHTSDWHLG+ F+ S + A L L++ + + VDA+IVAGD++D PP+ A Sbjct: 1 MKFLHTSDWHLGRQFHQVSLLDDQSAVLAQLIDFLRDNPVDAVIVAGDIYDRSIPPTAAI 60 Query: 61 TLYNRFV-VNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L + V V + L+++ GNHD L + M + A Q L Sbjct: 61 DLLDEVVSVICGELKTPLLMIPGNHDGAKRLGFAAKQMKNSGLHIFADFEQMMQPLVLHS 120 Query: 120 GTPGAV-LCPIPFLRPR--------DIITSQAGLNGIEKQQHLLAAIT---DYYQQHYAD 167 G V +P+ P DI T A Q L +I + Q+H Sbjct: 121 PQAGEVAFWGMPYHDPELVRHYYHNDITTHDAA------HQFLCESILAQRNPSQRH--- 171 Query: 168 ACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQ 227 + H GA +S++ R + IG D ++F P DY+ALGH+H+ Q Sbjct: 172 ------------VLISHCFVDGAMESESERPLSIGGSDRVDHRHFLPFDYVALGHLHQPQ 219 Query: 228 IIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQP--MAVLKGD 285 + G EH+RY GS + SF E ++K LV G+ + ++P+ P M +++G+ Sbjct: 220 MKGA-EHIRYSGSLMKYSFGEQHQNKGATLVEL--GQQGFISATHIPLIAPHQMRIIEGE 276 Query: 286 LASITA 291 L +I A Sbjct: 277 LEAILA 282 >UniRef50_Q1J058 Nuclease SbcCD, D subunit n=3 Tax=Deinococcus RepID=Q1J058_DEIGD Length = 395 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 86/284 (30%), Positives = 133/284 (46%), Gaps = 37/284 (13%) Query: 1 MRILHTSDWHLGQNFYSKSREAE-HQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYA 59 MR+LHT+D+H G+N R E H+A ++ + A++ + D ++V+GD+FDT +P + A Sbjct: 1 MRVLHTADFHAGRNLRGFDRTPEIHEALVE-IAGLARSEKADVVLVSGDLFDTVNPSAEA 59 Query: 60 RTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPR-- 117 F + L+ V +AGNHDS A L+ ++ ++ +VA P + R Sbjct: 60 EAAVFDFFLRLRDANIPAVAIAGNHDSAARLHSLAGLLGWVGVQLVAQPTANPLDMIRTV 119 Query: 118 --RDG---TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYAD----- 167 R G T GA +PFL R ++ K L+ ++Q Y + Sbjct: 120 ETRQGERLTVGA----LPFLSERRLV----------KAADLMGGEVGAWRQKYREGMGFF 165 Query: 168 ----ACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAF---PAQNFPPADYIAL 220 A RGD ++ H T GA S + R + ++A+ P Q A Y+AL Sbjct: 166 LRKLAEGFRGDSVNMLML--HATMDGAVPSGSERTMQFDLMNAYTLSPLQLPAGAQYVAL 223 Query: 221 GHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGK 264 GH+H+ Q M Y GS I L F E G+ K V+LV G+ Sbjct: 224 GHVHKPQPASEMPLAHYPGSIIQLDFGEGGEKKQVNLVEVEAGR 267 >UniRef50_C8PR34 Exodeoxyribonuclease I subunit D n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PR34_9SPIO Length = 399 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 106/408 (25%), Positives = 180/408 (44%), Gaps = 44/408 (10%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M++LHT+D HLG+ + + L+ + + A+I+AGDV+D P + A Sbjct: 1 MKLLHTADLHLGKTLHETPLLGVQEKMLNDIHDILTRDDYAALIIAGDVYDRAIPSAEAV 60 Query: 61 TLYNRFVVNLQQT--GCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRR 118 +L+++F+ +++ + ++ GNHDS L +R+I+ + G + Sbjct: 61 SLFSKFLARIREDCPDTAVFIIPGNHDSAQRLAFAREILQNQRIYIAQDTGKLADPVILT 120 Query: 119 DGTPGAVLCPIPFLRPRDII--TSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQP 176 +GT + +PFL T + + Q + A + +Q ++ D Sbjct: 121 EGTEKLAVYLLPFLNFGAFSEETKETYRTAGDSQAEMAAVASHILKQ------AVKPD-- 172 Query: 177 LPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVR 236 +P + HL TVG S + R +IGT + F DY+ALGH+HR Q I + + Sbjct: 173 IPALLAAHLFTVGGQSSASER-TFIGTAEYVNPDLFSFFDYVALGHLHRCQRI--TDRMY 229 Query: 237 YCGSPIPLSFDECGKSKYVHLVTFS--------NGKLESVENLNVPVT--QPMAVLKGDL 286 Y GSP+P SFDE +K V + NG V +P+ +P+ L+G Sbjct: 230 YSGSPLPYSFDESDDAKCVLSIDIDCTPKQPDINGAKAPVTIERIPIISERPLKRLEGSF 289 Query: 287 ASITAQ--LEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRS--- 341 A + ++W +L+I + E I +Q L + P + + ++S Sbjct: 290 ADFFTEHLYDEWSG------CYLEITLNDAEV---IAHPMQLLRQKFPFLLSIRQKSFMN 340 Query: 342 -REQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRL-QHLF 387 EQ E L ++R L++ E FNR E L +Q R+ Q LF Sbjct: 341 QEEQEEEQLTLRERTAEDPLTLAENFNR---FESLINGEQNRMKQELF 385 >UniRef50_C8P3T7 Exonuclease n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P3T7_ERYRH Length = 379 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 71/262 (27%), Positives = 123/262 (46%), Gaps = 16/262 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+I+H +D H+G+ S + + L+ ++E+ T + +++AGDV+D +P + A Sbjct: 1 MKIVHIADLHIGRRLNDLSLLEDQRYVLNQIIESLDTIKPHVLLIAGDVYDKANPSAEAF 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 ++N F+ L +++++GNHDS L R + + +V+ + ++ +D Sbjct: 61 EVWNDFLTQLSHRNIQVLIISGNHDSQERLGVGRALFEEHDIYLVSHYTGSIPVVTLQDD 120 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 IP+++P + G Q+ D L+ +Q + Sbjct: 121 LGPVHFHMIPYIKPSMVRNYHPEFTGTTFQEAFEFIFQD-----------LKINQEDRNV 169 Query: 181 ATGHLTTVGASKSDAVRDIYI----GTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVR 236 A H +G + + D I G LDA A F DY+ALGHIHR Q I G E +R Sbjct: 170 AIAHQFVIGNGTTPILSDSEIGPSVGGLDAIDASLFQKFDYVALGHIHRPQAI-GRETIR 228 Query: 237 YCGSPIPLSFDECGKSKYVHLV 258 Y GSP+ SF EC +K + ++ Sbjct: 229 YAGSPLKYSFSECMHTKQLPII 250 >UniRef50_A9BEV6 Nuclease SbcCD, D subunit n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BEV6_PETMO Length = 374 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 100/382 (26%), Positives = 168/382 (43%), Gaps = 35/382 (9%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ +HT+DWHLG+ YS + + LD L D +++AGD++D G PPS A Sbjct: 1 MKFVHTADWHLGKIIYSNYMTLDQKYILDNFLAYLSKTPPDVLLIAGDLYDRGIPPSEAV 60 Query: 61 TLYNRFVVNLQQTGCHL--VVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRR 118 L N V++ G + ++++GNHDS L I++ +N + + + + Sbjct: 61 NLLNE-VLSKIVLGLKIPTLIISGNHDSDERLEFLNGILSNMNLHIEGTLKKEVKKITFN 119 Query: 119 DGTPGAVLCPIPFL---RPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQ 175 D +P++ + DI + E + LL +HY D+ L D+ Sbjct: 120 DEYGPVNFFMLPYVDSQKAGDIFETN-----FEDKTQLL--------KHYLDSIDLDEDE 166 Query: 176 PLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHV 235 +IA H G S++ R + IG + F DY+ALGH+HR Q I +++ Sbjct: 167 RNVLIA--HEYIKGGLNSESERPLTIGGSEYVDPDIFEKFDYVALGHLHRPQKI---KNI 221 Query: 236 RYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQ 295 Y GS + SF E K ++LV VE L+ + M +++G I ++E Sbjct: 222 YYSGSLLKYSFSEADHIKGMNLVEMKEKGNIKVEKLSFKTAKDMKIIRGSFDDI-MKMES 280 Query: 296 WRDVSQEPPVWLDIEITTDEYLHDIQRKIQAL---TESLPVEVLLVRRSREQRERVLASQ 352 D +L I + + ++D K++A SL L + R+ + Sbjct: 281 SED-------YLQIILENTKPVYDAINKLRAKFPNVLSLDFPNLKTNDEIKTRDYNIRKI 333 Query: 353 QRETLSELSVEEVFNRRLALEE 374 L +L +EV N+ L+ EE Sbjct: 334 SPVDLFKLFYQEVKNQELSFEE 355 >UniRef50_B0NZF1 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0NZF1_9CLOT Length = 379 Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 84/333 (25%), Positives = 157/333 (47%), Gaps = 26/333 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILH D HLG+ S + + LD ++ + ++D I++ GD++D P A Sbjct: 1 MKILHLGDLHLGKRVNEISMIEDQKFILDQIVTLVKEEKIDVILLCGDIYDKAIPTIEAI 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 L + F+ L +++++GNHDS L+ R++ N + + + + ++ Sbjct: 61 HLLDEFLEELSDLKVKVLMISGNHDSSERLSFGRNLFKRSNLYIASQFNQEIEKITIKED 120 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQ---HYADACKLRGDQPL 177 +PF++P A +N H+L T+ Y++ H + K+ D+ Sbjct: 121 GYNINFYMLPFVKP-------AYIN------HVLKIQTETYEECFKHLMEQVKINEDET- 166 Query: 178 PIIATGHLTTVGASK---SDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEH 234 I+ TVG + SD+ +G +D + F DY+ALGHIH+ Q +G E Sbjct: 167 NILLAHQFVTVGKNSPELSDS-ETSSLGGIDNIDYRLFDAFDYVALGHIHKPQAMGR-EM 224 Query: 235 VRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLE 294 VRY GS + SF E K K ++T S K S L+ + +P+ ++ S+ + L+ Sbjct: 225 VRYAGSILKYSFSEIYKDKQATILTISKNKQIS---LSHHLLKPLRDMREMECSLESLLK 281 Query: 295 QWRDVSQEPPVWLDIEITTDEYLHDIQRKIQAL 327 + ++ E ++ + +T +E + D K++ + Sbjct: 282 RKCEIGNEED-YMHVILTDEEQILDAIGKVRTV 313 >UniRef50_A1ZGU7 DNA repair exonuclease n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZGU7_9SPHI Length = 405 Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 102/349 (29%), Positives = 159/349 (45%), Gaps = 37/349 (10%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHT+DWHLG+ + +R E + L+ + + A VD +IVAGD++DT +P + A Sbjct: 1 MKILHTADWHLGKKLETYTRLPEQEEVLNEICQIADREAVDVVIVAGDLYDTFNPTNDAI 60 Query: 61 TLYNRFVVNLQQTGCHLVV-LAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 TL+ + + + + G V+ +AGNHDS + E+ D +A V+ H+ + D Sbjct: 61 TLFYKTLKRISKNGTRPVIAIAGNHDSPDRI-EAPDPLAKECGIVLLGFPHSEVSPFKLD 119 Query: 120 GTPGAVLCPIPFLR--------PRDIITS--------QAGLNGIEKQQHLLAAITDYYQQ 163 G FL P +I + +A L +K+ L + +QQ Sbjct: 120 TGLGVTKSEQGFLEMKVPGHDAPLRLIVTPYANELRLKAFLGLTDKEGELRNLLQQRWQQ 179 Query: 164 HYADA-CKLRGDQPLPIIATGHLTTVGASKSDAVRD------IYIGTLDAFPAQNFPP-A 215 ADA C +G L HL + V D ++IG + P Sbjct: 180 -LADAHCNAQGINML----VAHLFMMKKGGEAPVEDESEKSILHIGGAQQIYTEQVPSQM 234 Query: 216 DYIALGHIHRAQIIGGME-HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVP 274 Y+ALGH+HR Q I G V Y SP+ SF E ++KYV ++ GK VE + Sbjct: 235 QYVALGHLHRYQNISGAPCPVVYSSSPLAYSFAEANQTKYVAIIEAEPGK--PVEVNRIA 292 Query: 275 VTQPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRK 323 + + +L+G + +E W +Q ++I I TD YL +RK Sbjct: 293 LEKGKKLLRGRFDEMDKAVE-WLKENQN--ALVEITIVTDHYLTAKERK 338 >UniRef50_D1BIQ6 Exodeoxyribonuclease I subunit D n=2 Tax=Actinobacteria (class) RepID=D1BIQ6_SANKS Length = 394 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 99/317 (31%), Positives = 148/317 (46%), Gaps = 17/317 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHTSDWHLG+ + A+LD L+E ++ VDA++VAGDV+D PP A Sbjct: 1 MRILHTSDWHLGRTLHGVDLLDHQAAYLDHLVELVRSESVDAVVVAGDVYDRAIPPVEAV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIM--AFLNTTVVASAGHAPQILPRR 118 TL + + L + +VV GNHDS L ++ VA G P L Sbjct: 61 TLLSTALARLAEI-TQVVVTPGNHDSATRLGFGAELWREGVHVRARVADIGR-PVELETT 118 Query: 119 DGTPGAVLCPIPFLRP---RDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQ 175 DG P A++ +P+L P R ++ + + + A + A + Sbjct: 119 DGAP-ALVYALPYLDPDAARTVLREEDEPPLARSHEAVTGAAMRRVRADLAARGATVSAR 177 Query: 176 PLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQII--GGME 233 P ++ H VG S++ RDI +G +D PA DY+ALGH+H AQ + GG Sbjct: 178 PRSLV-VAHAFVVGGEASESERDIRVGGVDTVPAAVLEGVDYVALGHLHGAQRVATGGGT 236 Query: 234 HVRYCGSPIPLSFDECGKSKYVHLVTFS-NGKLESVENLNVPVTQPMAVLKGDL-----A 287 RY GSP+ SF E + K LV +G + + + PV + ++ + G L A Sbjct: 237 VGRYSGSPLAYSFSEMRQRKSTALVDLGPDGVVGEPQLVPAPVPRRLSEVSGSLDDLLGA 296 Query: 288 SITAQLEQWRDVSQEPP 304 + A ++ W V+ P Sbjct: 297 AGEAHVDDWVRVTVTDP 313 >UniRef50_B1YES6 Nuclease SbcCD, D subunit n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YES6_EXIS2 Length = 373 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 99/374 (26%), Positives = 164/374 (43%), Gaps = 39/374 (10%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ +HT+DWHLG+ + +S +A L L Q DA+I+AGD++D PP+ A Sbjct: 1 MKWIHTADWHLGKIVHGESMLDNQRAVLQEFLRLLDREQPDAVIIAGDLYDRAVPPTEAV 60 Query: 61 TLYNRFVVNL-QQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAG------HAPQ 113 L + + ++ + +V ++GNHDS L+ TT++ AG Sbjct: 61 ELLDTVLADIVLERKIPVVAISGNHDSAERLS--------FGTTLLQRAGLHLAGKLTDT 112 Query: 114 ILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRG 173 I P G P+PF P A + I + + + D + +L G Sbjct: 113 IEPVE--IKGVRFYPVPFADP-------ATVRYIHQDETI--RTHDDAMRKIISKMELEG 161 Query: 174 DQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGME 233 P + GH +G ++D+ R + +GT A +F P Y ALGH+H I E Sbjct: 162 ----PSVLVGHAFVIGGLETDSERQLSVGTAGQVSASSFAPFTYTALGHLHNPLAIKS-E 216 Query: 234 HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQL 293 +RY GS + SF E K V ++T ++G + + + L G LA +TA Sbjct: 217 TIRYSGSLLKYSFSEASHVKGVDILTLNDGGTFDRRFEPLTAKRDLRELTGSLAELTAPA 276 Query: 294 EQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQ- 352 +Q ++ I +T E L D K++ L + +L + R+ RE A Q Sbjct: 277 FV---ATQATDDYIKINLTDAEALIDPMGKLKKLYPN----ILHLERTGFTRESTRAVQA 329 Query: 353 QRETLSELSVEEVF 366 R+ + ++ ++F Sbjct: 330 SRDQVQAATLTDLF 343 >UniRef50_A0AJ98 SbcD protein n=27 Tax=Bacillales RepID=A0AJ98_LISW6 Length = 374 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 101/388 (26%), Positives = 162/388 (41%), Gaps = 24/388 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ LHT+D HLG+ S AE + L + + A+ QVDA+I+AGD++D PP+ A Sbjct: 1 MKFLHTADLHLGKIVSGISILAEQEYILAQITKIAEEEQVDALILAGDLYDRAVPPADAV 60 Query: 61 TLYNRFVVNLQ-QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 + N +V + G + ++GNHDS L + + +P D Sbjct: 61 KVLNDILVKWNVELGIPIFAISGNHDSAERLAFGSQWYESSKLYMKGKCTSQFEAIPFMD 120 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 A + +P+ P II N I + + A+T + + DQ Sbjct: 121 ----AEVWLVPYHEPA-IIREVFADNTIRSFEDAMQAVTKQIRSKW--------DQTKAQ 167 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCG 239 I GH G SD+ R + IG +D F Y ALGH+H I + Y G Sbjct: 168 ILVGHAFVSGGIPSDSERQLAIGNVDRVSTDCFDGFTYTALGHLHHPHAI-RHPSIYYSG 226 Query: 240 SPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDV 299 SP+ SF E K V +V +L SV ++ M ++ G LA +T L Sbjct: 227 SPLKYSFSEANDVKSVRIVEIKGKELISVTERSLTPKHDMRIISGTLAELTENL------ 280 Query: 300 SQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSE 359 P + + + + L D K++ P + L R + +E + ++ + Sbjct: 281 VPNPNDFFQVNLMDEGALIDPMGKLRQF---YPNILHLERTKQTLKETEDSFEEIMKKDD 337 Query: 360 LSVEEVFNRRLALEELDESQQQRLQHLF 387 L + F + EL E+Q+Q+L +F Sbjct: 338 LELFGQFFEHVNGTELTETQKQKLVDVF 365 >UniRef50_C4V2E2 Exonuclease SbcD n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V2E2_9FIRM Length = 381 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 92/331 (27%), Positives = 155/331 (46%), Gaps = 25/331 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR +HT+DWHLG+ F + + L+ LL + + DA+++AGDV+D PP A Sbjct: 1 MRFIHTADWHLGKLFGQRHMTEDQAYVLEELLALCRDVRPDALVLAGDVYDRAVPPPEAV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIM----AFLNTTVVASAGHAPQILP 116 L+N + L + G ++ +AGNHDS L ++ ++ T+ A A AP +L Sbjct: 61 ALFNTVLTRLAEQGIKVLCIAGNHDSAVRLAFGAQLLQSSGVYIAGTLDAEA--APVVL- 117 Query: 117 RRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQP 176 D +P+ P I S + +++ A+ Q + A +G + Sbjct: 118 -SDAFGDVYFSLLPYGDPPHIRESFS----LDETPSFDTALD--VQIASSRAMIPQGARS 170 Query: 177 LPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVR 236 +A H +G S++ + +G D A F P +Y ALGH+H Q G E +R Sbjct: 171 ---VAVAHAFVIGGQTSESEHTLSVGGSDQVHADKFRPYNYTALGHLHAPQ-RAGAEQIR 226 Query: 237 YCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQW 296 Y GS + SFDE + K V LV S + + +++G +A I + +++ Sbjct: 227 YAGSLLKYSFDESHQKKGVTLVDIDAAGAVSHTFYPLVPRHDVRIVRGKMAEIMS--DEF 284 Query: 297 RDVSQEPPVWLDIEIT-TDEYL--HDIQRKI 324 +S E ++ +E+T TD L H+ R++ Sbjct: 285 DPLSHED--YICVELTDTDAVLAAHEKLRRV 313 >UniRef50_C7GI85 Exonuclease SbcD (Fragment) n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GI85_9FIRM Length = 304 Score = 104 bits (259), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 75/269 (27%), Positives = 124/269 (46%), Gaps = 17/269 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ LH SD H+G+ S + + L + E A QVDA+++AGD++D P + A Sbjct: 1 MKFLHISDLHIGKRVNEFSMIEDQKYILRQIKEIALEKQVDAVMIAGDIYDKPVPSAEAV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 L+++F+ L G + ++GNHDS + +M+ V + + +D Sbjct: 61 QLFDQFLTGLADCGKKVFAVSGNHDSAERIAFGAQLMSSREVYVSPVYDGEVRCVTCQDA 120 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLN-GIEKQQHLLAAITDYYQQH-------YADACKLR 172 + +PF+RP + + + GI + D Q+ Y DA + Sbjct: 121 YGELCIWLLPFIRPAVVRHAWRKVTEGISIGKKDAGTKQDLAQEDDVETVETYQDALQFV 180 Query: 173 GDQPLPI------IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRA 226 +P+ I H GAS+ ++ ++ +G LD A+ F DY+ALGHIH Sbjct: 181 VSH-MPVDASKRNILVAHQFVTGASRCES-EEVSVGGLDQIGAEVFDVFDYVALGHIHSP 238 Query: 227 QIIGGMEHVRYCGSPIPLSFDECGKSKYV 255 Q I E +RYCG+P+ SF E + K + Sbjct: 239 QHI-ERETLRYCGTPLKYSFSEAEQKKEI 266 >UniRef50_D2QSS6 Nuclease SbcCD, D subunit n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QSS6_9SPHI Length = 408 Score = 103 bits (258), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 119/428 (27%), Positives = 178/428 (41%), Gaps = 58/428 (13%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHT+DWHLG+ R E + L +++ A VD ++VAGD+FDT +P A Sbjct: 1 MKILHTADWHLGKRLQDFQRLQEQRDVLAEIVQVANQEDVDLVLVAGDLFDTFNPDPKAE 60 Query: 61 TLYNRFVVNLQQTGCHLVV-LAGNHDSVATLNESRD---------IMAFLNTTV------ 104 L + L G VV +AGNHD+ + E++D F T V Sbjct: 61 DLLYSTLKELTANGRRTVVAIAGNHDNPDRI-EAQDHFGRECGIIFAGFPKTEVRSYELS 119 Query: 105 ------VASAGHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGI--EKQQHLLAA 156 ++ G LPR D ++ P + S G+ + E +QHL Sbjct: 120 CDAKLLCSAPGFIELKLPRHDAPVRIIMTP---YANETRLRSYLGMVSLDDELRQHL--- 173 Query: 157 ITDYYQQHYADACKLRGDQPLPIIATGHLTTVG-----ASKSDAVRDIY-IGTLDAFPAQ 210 QH++ D+ + HL + +SD R I +G Sbjct: 174 -----HQHWSALADTYMDEQGINLLMAHLFVMKRGGEQPEESDDERSILQVGGASVVYTD 228 Query: 211 NFPPA-DYIALGHIHR-AQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESV 268 PP Y ALGH+HR QI GG V Y SP+ SF E + KYV LV G+ +V Sbjct: 229 MIPPQIQYTALGHLHRYQQIAGGPSPVIYSSSPLAYSFAEADQQKYVVLVDAEAGQPVTV 288 Query: 269 ENLNVPVTQPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYL-HDIQRKIQAL 327 VP+ +L+ + ++ R + P + +I + T +L D +R++Q Sbjct: 289 --TPVPLATGKRLLRPKFKRVDEAVDWLR---ENPNCYAEITLQTPTFLTSDERRQLQQA 343 Query: 328 TESLPVEVLLVRRSREQRERVLASQQRETLSELS--VEEVFNRRLALEELDESQQQRLQH 385 ESL + VR E Q+ +LS +E +F + + +RLQH Sbjct: 344 HESLVTIIPDVRDVEE------TEQETAPAIDLSQPMEALFTSYFKNKNKGQEPNERLQH 397 Query: 386 LFTTTLHT 393 LF L T Sbjct: 398 LFKEILAT 405 >UniRef50_D2LF15 Nuclease SbcCD, D subunit n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LF15_RHOVA Length = 390 Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 80/269 (29%), Positives = 125/269 (46%), Gaps = 20/269 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR+LHT+DWHLG+ F ++ + +H L+ + Q A+I+AGD+FD +P A Sbjct: 1 MRLLHTADWHLGRQFDGRALDDDHAHVLEQVYAVIVAEQPQALIIAGDLFDRAAPSEAAV 60 Query: 61 TLYNRFVVN-LQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVV---ASAGHAPQILP 116 L+N FV ++ T ++V+AGNHDS + + ++A N +V +A P IL Sbjct: 61 RLFNDFVQRVVRDTETAIIVIAGNHDSADRIG-AMGLLASRNRALVRGPLTAIEVPLILE 119 Query: 117 RRDGTPGAVLCPIPF-LRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQ 175 G P + R+ A +AA D + A A + Sbjct: 120 DEFGPVAISGLPFAYEYAARECFHDTA-----------IAAPVDVLRAQVAAAKEHVPAG 168 Query: 176 PLPIIATGHLTTVGASKSDAVRDI--YIGTLDAFPAQNFPPADYIALGHIHRAQIIGGME 233 +IA H GA ++ R + +G ++ F A Y+ALGH+HR Q + G E Sbjct: 169 ARWVIAA-HAFVSGAVVGESERSLSRAVGGIETVTVDVFEGAHYVALGHLHREQTVAGAE 227 Query: 234 HVRYCGSPIPLSFDECGKSKYVHLVTFSN 262 H+ Y GS +P +F E K + LV + Sbjct: 228 HICYSGSLLPFAFGEDDHDKGMLLVDLAE 256 >UniRef50_C2KSA5 Possible exonuclease SbcD n=2 Tax=Mobiluncus mulieris RepID=C2KSA5_9ACTO Length = 422 Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 93/327 (28%), Positives = 141/327 (43%), Gaps = 53/327 (16%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLG+ FY + FL +L + Q DA+++AGDV D +P Sbjct: 1 MKILHTSDWHLGREFYGYDLREYQEQFLAQMLGLLREFQPDALVIAGDVLDKKNPADVDV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA--PQILPRR 118 + + F+ + CH+V+++GNHD + L D++ + +V+ P +P R Sbjct: 61 LMLSEFICAANEY-CHVVIISGNHDGASRLGFLSDVLHRVGVHIVSRGSQVGIPIEIPNR 119 Query: 119 DGTPGAVLCPIPFLRP---RDIITSQAGLNG-------IEK----------QQHLLAAIT 158 +G L PIP+L P R+ +++ G +E+ QQ LL T Sbjct: 120 EGNLAGRLYPIPYLYPHQEREELSTWTDTEGNPHPDAWLEQNAAHSESEAPQQRLLPGKT 179 Query: 159 DYYQQHYADACKLRGDQPL------PIIATGH--LTTVGASKSDAVRDIYIG-------- 202 A A + G+ L P+I H T D V +G Sbjct: 180 GIIN---AAALRRIGNDILARGRTVPLIGIAHDNFTKNFTPPEDEVGKYTVGSLPNVDNT 236 Query: 203 ---TLDAFPAQNFPPADYIALGHIHRAQII---GGMEHVRYCGSPIPLSFDECGKSKYVH 256 TL + N DY ALGHIH+ + G E Y GSP+P + D+ KYV Sbjct: 237 VLATLGGVVSGN-QGLDYFALGHIHKCYPVIKSSGFE-AWYSGSPLPYATDDT-NDKYVL 293 Query: 257 LVTFSNGKLESVENLNVPVTQPMAVLK 283 V + +VE +P++ P V + Sbjct: 294 AVEINPAHEVTVE--KIPLSMPYQVCE 318 >UniRef50_B5YJR9 Exonuclease SbcD n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YJR9_THEYD Length = 387 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 81/297 (27%), Positives = 136/297 (45%), Gaps = 45/297 (15%) Query: 1 MRILHTSDWHLGQNFYSKSREAE--HQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSY 58 ++ILHTSDWHLG+ F + E + +D +++ + D +++AGD+FDT +P Sbjct: 3 LKILHTSDWHLGKVFKETTFELLPIQKQIMDEIVDITRKENPDIVLIAGDIFDTYNPSFE 62 Query: 59 ARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMA-----FLNTTV--------- 104 A ++ + L + C + LAGNHDS L S+ ++A F+ +T Sbjct: 63 AEKIFYETLSRLSEQNCFVFALAGNHDSPDKLQISKPLIAGKHSIFIKSTAFDESKDIEF 122 Query: 105 ------VASAGHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAIT 158 +A ++ + +GT A+ C +P+L ++ AG ++K LL+ Sbjct: 123 ENENFKLALENSFLKLHLKNEGTVIALKC-LPYL--SEVRLGLAGDEYLKKVNELLSIEP 179 Query: 159 DYYQQHYADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPP-ADY 217 + ++ + T HL+ GA +S + R IG ++ P P A Y Sbjct: 180 QFSCDYF--------------LLTSHLSIAGAQQSGSERIFQIGGIEYIPIDFLPKSAHY 225 Query: 218 IALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVP 274 IALGH+HR Q + + Y GS P E K V + + NGK + +E +P Sbjct: 226 IALGHLHRHQ---KLRNATYSGSIYPFDLAEIEHKKGVSV--WENGKPDFIEFNKIP 277 >UniRef50_Q03P49 DNA repair exonuclease n=46 Tax=Lactobacillales RepID=Q03P49_LACBA Length = 377 Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 70/262 (26%), Positives = 121/262 (46%), Gaps = 20/262 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR LHT+DWH+G+ + S E + + + + A+ QVDA+++AGD++D P A Sbjct: 1 MRFLHTADWHIGKKLHGYSLLDEQRDAYEQIKKIAEKEQVDAVVIAGDLYDRALPSEAAV 60 Query: 61 TLYNRFVVNL-QQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 N +V+L +Q ++ ++GNHDS L ++ A N + A + + D Sbjct: 61 GTLNAMLVDLNRQQHFPVLAISGNHDSATRLGYGQEWFASTNFFMRTRLAAALKPVTLAD 120 Query: 120 GTPGAVLCPIPFLRP---RDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQP 176 +P+ P R + + + L+ A+ Q ++A K Sbjct: 121 TQ----FFLLPYFEPIQARQLFEDDQIRTVNQAMERLVKAM----QANFAPDKKH----- 167 Query: 177 LPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVR 236 + H G SD+ + +G L+A P + P DY+ALGH+HR + + + ++ Sbjct: 168 ---VLVAHFFAAGGRHSDSETLVQVGGLNAVPTELLAPFDYVALGHLHRKEALQQVPTMK 224 Query: 237 YCGSPIPLSFDECGKSKYVHLV 258 Y GSP+ S E +K V L+ Sbjct: 225 YSGSPLKFSTSEAEDTKGVWLI 246 >UniRef50_C8P7X3 Exonuclease SbcD n=1 Tax=Lactobacillus antri DSM 16041 RepID=C8P7X3_9LACO Length = 383 Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 100/363 (27%), Positives = 161/363 (44%), Gaps = 42/363 (11%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR LHT+DWH+G+ S + QA + AQ QVDAI+VAGD++D P A Sbjct: 12 MRFLHTADWHIGKTLNDFSLLEDQQAAFTQIERIAQQAQVDAIVVAGDLYDRSVPSEAAV 71 Query: 61 TLYNRFVVNLQQTGCHLVVLA--GNHDSVATLNESRDIMA----FLNTTVVASAGHAPQI 114 T N + L H VLA GNHDS L+ D A +LNTT+ A+ Sbjct: 72 TELNGMLRQLN-LNDHFPVLAISGNHDSAVRLSTGTDWFARSSLYLNTTLAAAF------ 124 Query: 115 LPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGD 174 TP + FL P QA N + + D ++ A+ K Sbjct: 125 ------TPVTIKDTQFFLLP--FFGIQAVRNYFHDDH--IKNVNDAMERIVAEMKKSFAA 174 Query: 175 QPLPIIATGHLTTVGASKS-DAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGME 233 ++ H G+ ++ D+ I +G L A P DY+ALGH+H + + E Sbjct: 175 GKHQVL-VAHFFAAGSQRTADSETLIEVGGLSAVSTAVLAPFDYVALGHLHNRKALNE-E 232 Query: 234 HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQL 293 V+Y GSP+ S E + K V LV + + +V+ + + + +LKG + Sbjct: 233 RVKYSGSPLKFSVSEAHQEKGVWLV---DTEPFAVQWVPLQPVHDITLLKGSFRELVTS- 288 Query: 294 EQWRDVSQEPPV--WLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLAS 351 +++ P + DIE+T E + D+ K++ + +++ + R+ + R+ L Sbjct: 289 ------AKDKPATDFYDIELTDRERIPDVLNKLRTVYP----KIVSLHRTHQARQLALNR 338 Query: 352 QQR 354 Q++ Sbjct: 339 QKQ 341 >UniRef50_B0TDB7 Exonuclease sbcd n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TDB7_HELMI Length = 387 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 78/294 (26%), Positives = 123/294 (41%), Gaps = 16/294 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHT+DWHLG+ F+ + A LD ++ + + A+IVAGD++D PP A Sbjct: 1 MRILHTADWHLGRIFHQVHMTEDQAAVLDQFIDLIKDRRPHAVIVAGDIYDRSVPPVDAV 60 Query: 61 TLYNRFVVN-LQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L + + L ++++AGNHDS L + A + +P D Sbjct: 61 RLLDEVITRILLDHRTAVIMVAGNHDSADRLGFGNRLFAGRGFHLFGRLDRDMAPIPVED 120 Query: 120 GTPGAVLCPIPFLRP---RDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQP 176 T CPIP+ P R+ S + L + D+ + Sbjct: 121 ETGPVWFCPIPYAEPALVRETFGSSP--EAVRGHNEALRVLADHMSARTPAGARR----- 173 Query: 177 LPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVR 236 IA H G +S++ + +G F Y ALGH+HR Q G + +R Sbjct: 174 ---IAVAHAFVTGGEQSESESFLTVGGAGTVDGSIFEGFHYTALGHLHRPQHC-GHDRIR 229 Query: 237 YCGSPIPLSFDECGKSKYVHLVTFSN-GKLESVENLNVPVTQPMAVLKGDLASI 289 Y GS + SF E K + V G++ + E++ + + + L+G L I Sbjct: 230 YSGSLLKYSFSEADHQKGITFVELDGAGQITACESIALTPRRDVRRLEGYLNDI 283 >UniRef50_C7HA25 Exonuclease SbcD n=4 Tax=Clostridiales RepID=C7HA25_9FIRM Length = 408 Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 77/263 (29%), Positives = 119/263 (45%), Gaps = 23/263 (8%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR LH SD HLG+ S + + L+ +L +H VDA+++AGD++D PP+ A Sbjct: 30 MRFLHLSDLHLGKRVCEFSMLDDQRYILEQILSLLDSHPVDAVLLAGDLYDKPVPPAEAV 89 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 L + F+ L + ++GNHDS + ++A V P+ + D Sbjct: 90 RLLDWFLTELSHRELPVFAISGNHDSADRVAFGSALLAESRVYVSPVFSGPPEPITLTDA 149 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLL--AAITDYYQQHYADACKLRGDQPLP 178 L +PFL+P + +H+ A I Y A AC L P P Sbjct: 150 HGPVDLYLLPFLKPAMV-------------RHIWPDAPIESYND---ALACVLDHCSPDP 193 Query: 179 I---IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHV 235 + H GA+ ++ + +G +D A F DY+ALGH+H Q + G + + Sbjct: 194 ARRSVLVAHQFVAGAASCES-EEPSVGGIDWVDAALFDKFDYVALGHLHSPQKV-GRDTL 251 Query: 236 RYCGSPIPLSFDECGKSKYVHLV 258 RYCG+P+ SF E + K V V Sbjct: 252 RYCGTPLKYSFSEANQHKSVTFV 274 >UniRef50_C0VZX2 DsDNA exonuclease subunit n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VZX2_9ACTO Length = 389 Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 82/302 (27%), Positives = 134/302 (44%), Gaps = 18/302 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHT+DWHLG+ + S E FLD+ ++ +A+++AGD+FD A Sbjct: 1 MKILHTADWHLGRVLHGYSLEDYQAQFLDFFIDLVTQEVPEAVLIAGDIFDRSIASIRAL 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIM-AFLNTTVVASAGHAPQILPRRD 119 L ++ + L ++++ GNHDS + L + + S P +L + Sbjct: 61 ELMDQALQKLSAL-TQVILIPGNHDSASRLGYGTALYHDQIKVFSKYSQAGTPVVL---E 116 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQH-YADACKLRGDQPLP 178 + PIP+L P + N A+ D Q + D ++P Sbjct: 117 ADTAVNIYPIPYLEPDLARFEFSDPNADIPVARSHQAVNDAAAQRIFTDL----AERPGI 172 Query: 179 IIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPAD----YIALGHIHRAQIIGGMEH 234 I H G+ S++ RDI +G + + A F Y+A GH+HR Q +G Sbjct: 173 GIVMAHPFVSGSVISESERDISVGGVQSIGADTFKDPSGKIRYVACGHLHRPQSLGATSD 232 Query: 235 --VRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASI-TA 291 VRY GSP+P SF E +K + + + +E + + +P + + KG LA + A Sbjct: 233 YVVRYSGSPLPFSFSEACDTKSITRLDITGSTVE-ISEIPIPQSYKLCSFKGTLAELEEA 291 Query: 292 QL 293 QL Sbjct: 292 QL 293 >UniRef50_B8I3W2 Nuclease SbcCD, D subunit n=5 Tax=Clostridium RepID=B8I3W2_CLOCE Length = 388 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 77/311 (24%), Positives = 139/311 (44%), Gaps = 15/311 (4%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+I+HT DWH+G+ S + + L+ L+ + + DA+I+AGD+FD PP A Sbjct: 1 MKIIHTGDWHIGKIVNEFSMLEDQEYILNQLISVIENEKPDALIIAGDIFDRSIPPVDAV 60 Query: 61 TLYNR-FVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L ++ F + L + +AGNHDS L+ + I+ + S + + D Sbjct: 61 ELVDKVFNIVLLDLRVPIFAIAGNHDSAERLSFASRILTNNGLHIAGSFDGNIRKVILED 120 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 G IP+ PR I Q + ++ D ++ + + + Sbjct: 121 GFGPVNFYLIPYSDPRTIRNIL--------QDNEISTHDDAMKKLVEKVGQAENENKRSV 172 Query: 180 IAT-GHLTTVGASK---SDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHV 235 + T G++T +G S++ R + IG D + F Y ALGH+H Q G +++ Sbjct: 173 MITHGYITYMGGQADIISESERPLSIGGTDIVNSNYFNSFSYTALGHLHAPQ-RAGADNI 231 Query: 236 RYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQ 295 RY GS + SF E + K +++V V+ + + M ++KG L + E Sbjct: 232 RYSGSLLKYSFSEVNQKKGINVVEIDGDGNSCVKLTELKPKRDMRIIKGPLEELLKS-EV 290 Query: 296 WRDVSQEPPVW 306 ++D + + ++ Sbjct: 291 YKDTNTDDYIY 301 >UniRef50_C7TAC2 Exonuclease n=15 Tax=Lactobacillus RepID=C7TAC2_LACRG Length = 374 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 70/262 (26%), Positives = 116/262 (44%), Gaps = 20/262 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR LHT+DWH+G+ + QA + L+ A+ QVDAI++AGD++D P A Sbjct: 1 MRFLHTADWHIGKKLNDFDLLEDQQAVFEQLVTVAKQQQVDAIVIAGDLYDRALPSEAAV 60 Query: 61 TLYNRFVVNLQQTGCH-LVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 + +V L + + L+V++GNHDS L R F T + + A P Sbjct: 61 ATLDHMLVTLNRKLNYPLLVISGNHDSAVRLRTGRSW--FSTTKMYVNTQLAEAFTPVEL 118 Query: 120 GTPGAVLCPIPFLRP---RDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQP 176 G L +P+ P RD N + + ++A + + + D Sbjct: 119 GDTQFFL--LPYFEPFAVRDYFQDATITNVAQAIRPIVAKMK----------AQFKPD-- 164 Query: 177 LPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVR 236 + I H G+ S + + +G LDA P + DY+ALGH+H + ++ Sbjct: 165 MRHILVSHFFAAGSDHSASETKVNVGGLDAVPIDDLAAFDYVALGHLHNHNALHAEPKIQ 224 Query: 237 YCGSPIPLSFDECGKSKYVHLV 258 Y G+ + + E + K V++V Sbjct: 225 YSGALLKYAVAEAKQEKGVYIV 246 >UniRef50_C9KJP5 Exonuclease n=3 Tax=Veillonellaceae RepID=C9KJP5_9FIRM Length = 367 Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 94/349 (26%), Positives = 158/349 (45%), Gaps = 31/349 (8%) Query: 40 VDAIIVAGDVFDTGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIM-- 97 V+A+I+AGD++D G PP A L++ F++ + + +AGNHDS + LN +M Sbjct: 24 VEAVIIAGDIYDRGVPPVEAVDLFDEFLMKMAGLRVKVFYIAGNHDSESRLNFGSRLMRE 83 Query: 98 AFLNTTVVASAGHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAI 157 A + A AP I+ D P A+ P++ P + K + Sbjct: 84 AGIFARGRLDAAMAP-IIVEDDFDPVAIYL-YPYMEPASV-----------KAAFGVTEA 130 Query: 158 TDYYQQHYADACKLRGDQPLPI--IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPA 215 D+ + H K P + IA H G + SD+ R + +G F P Sbjct: 131 LDFEKAHELVIEKSLTGAPEKMRSIAVAHAFLAGGTSSDSERPLAVGGSSNIRPGIFRPF 190 Query: 216 DYIALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTF-SNGKLESVENLNVP 274 Y ALGH+H Q G + +RY GS + SFDE + K LV +GK VE VP Sbjct: 191 CYTALGHLHNPQ-RAGADTIRYSGSLMKYSFDEAEQKKGFFLVDLDGSGK---VEQKFVP 246 Query: 275 VTQPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVE 334 + P + + + + A +E R + ++++E+ + D+ K++A+ +L Sbjct: 247 LVPPHDIRR--VRGLFADIEGDRAAYPQSDDYIEVELLDRGIILDVFNKLKAIYPNL--- 301 Query: 335 VLLVRRSREQRERVLASQQRETLSELSVEEVFNRR---LALEELDESQQ 380 + V QRE + Q+ + + +L+ E +F++ + E+L E QQ Sbjct: 302 -MHVLYPNLQREGTMREQEGQAVLKLTEETLFSQYYEDMTGEKLGEEQQ 349 >UniRef50_C6VPS0 Exonuclease SbcD n=5 Tax=Lactobacillales RepID=C6VPS0_LACPJ Length = 393 Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 107/409 (26%), Positives = 176/409 (43%), Gaps = 45/409 (11%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M++LHT+DWH+G+ S E +A +L A +VD I++AGD++D P + A Sbjct: 1 MKLLHTADWHIGRTLNGYSLLDEQEAAFKQILTIALAEKVDGIVIAGDIYDRAVPSTDAV 60 Query: 61 TLYNRFV--VNLQQTGCHLVV--LAGNHDSVATLNESRDIMAFLN---TTVVASAGHAPQ 113 T + + +N++ HL + +AGNHD LN R+ +A+ N T++A A + Sbjct: 61 TSLDHMLQAINIEH---HLPIYAIAGNHDGAKRLNYGREWLAYNNFHINTLLAEAFTPIE 117 Query: 114 ILPRRDGTPGAVLCPIPFLRPRD--IITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 TP A + +PF P D + Q GL EKQ + I D Q+ +D Sbjct: 118 -------TPTAQIFMLPFFDPIDARVYYQQQGLP--EKQVKAIHTIHDAMQRVVSDLVAT 168 Query: 172 RGDQPLPIIATGHLTTVGASKSD----AVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQ 227 + ++ T H T + D + +G L F DY+ LGHIH Sbjct: 169 FDPEKRHLLIT-HFTVTPKADDDLELTSETTSKVGGLATLTTDLFADFDYVMLGHIHTRL 227 Query: 228 IIGGMEHVRYCGSPIPLSFDECGKS---KYVHLVTFSNGKLESVENLNVPVTQPMAVLKG 284 + +RY GSP+ + E K V +VT + ++ + P+ QP + Sbjct: 228 ASPDKDRIRYAGSPVKFNVKEANPKFHGKGVEIVTITP---TAITHEFKPI-QP----QT 279 Query: 285 DLASITAQLEQWRD---VSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRS 341 DL ++ A E D Q+P IT E+ ++A E + +V Sbjct: 280 DLVTLRAPWETLLDPNFYQQQPLKQAWFAITVQEFDRSKHLNVRAQLEQ--IYGTIVELD 337 Query: 342 REQRERVLASQQRETLSELSVEEV---FNRRLALEELDESQQQRLQHLF 387 E + A + ++ELS + + F + +L +QQQ + +F Sbjct: 338 YESNHQATAISGPKNMNELSPDAIVGQFFHAITGNQLSTTQQQLVDQIF 386 >UniRef50_C7RGF6 Nuclease SbcCD, D subunit n=4 Tax=Anaerococcus RepID=C7RGF6_ANAPD Length = 371 Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 90/353 (25%), Positives = 149/353 (42%), Gaps = 35/353 (9%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR+LH SD HLG+N S E L +++ + VD +++AGD+FDT P + A Sbjct: 1 MRLLHLSDLHLGKNIGSYFLIEEQGFALAEIIKIIKEEDVDIVMIAGDIFDTIIPSAEAM 60 Query: 61 TLYNRFVVNLQ-QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 LY+ F+ + G ++ ++GNHDS L+ ++ N +V+ P + D Sbjct: 61 DLYSNFIEEIVFDLGKKVLAVSGNHDSSKRLDINKRFYRSNNYYLVSEYDKDP--ISFED 118 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 IPF+ I K + + + D + Y A + + + Sbjct: 119 DFGKVNFYLIPFI-------------SINKAKTIFDSSIDNFTDVYKYALEAIDYRDRNV 165 Query: 180 IATGHLTTVGASKSDAVRD-----IYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEH 234 + T + +S V D + IG DA A F DY+ALGH+HRA + + Sbjct: 166 LITHCYASNMSSFDKEVYDEGQKPLTIGGTDAMDASLFEGFDYVALGHLHRAHYVLDPK- 224 Query: 235 VRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLE 294 +RY G+ + SFDE +K V LV + + + +P + +G I + E Sbjct: 225 IRYSGTFMKYSFDEENLTKTVSLVDLKDKA--EIRKIEIPFLRDFVTKRGMFEEILKE-E 281 Query: 295 QWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRER 347 + D + I D Y+H + + L E P V + ++ ER Sbjct: 282 KSEDYIK--------FILEDSYIH--ENAMARLKEKFPRAVSITYANKAVFER 324 >UniRef50_B6WA19 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6WA19_9FIRM Length = 364 Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 75/281 (26%), Positives = 127/281 (45%), Gaps = 48/281 (17%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M++LH SD H+G+N S S + + LD +L+ + ++D +I+AGD+FDT P S + Sbjct: 1 MKLLHLSDLHIGKNIGSYSLLEDQKYCLDQILDIIKNEKIDIVIIAGDIFDTSIPNSESM 60 Query: 61 TLYNRFV----VNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILP 116 +Y+ FV +L++ ++ ++GNHDS L S+ + + S+ L Sbjct: 61 KVYSDFVDKIIFDLKKK---IIAISGNHDSGKRLEISKSFFEKNSYYIFGSSFDKSLTLE 117 Query: 117 RRDGTPGAVLCPIPFL---RPRDIITSQAGLNGIEKQQHLLAAITDYYQQH------YAD 167 G PIP++ R ++ I + +L DY ++ YA+ Sbjct: 118 DEFGLVN--FYPIPYISLARAKNEI--DPNIENFTDLYRILLKDIDYNDRNVLISHCYAN 173 Query: 168 AC-----KLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGH 222 ++ G++PL T+G + DA A F DY+ALGH Sbjct: 174 EKAFEDEEIEGEKPL---------TIGGN-------------DAMDANLFENFDYVALGH 211 Query: 223 IHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNG 263 +HR + E +RYCG+ + SF E + K V +V + Sbjct: 212 LHRKHFVID-EKIRYCGTFMKYSFSEVRQKKSVTVVDLKDN 251 >UniRef50_UPI0001C366D6 nuclease SbcCD, D subunit n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C366D6 Length = 384 Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 75/289 (25%), Positives = 125/289 (43%), Gaps = 7/289 (2%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR +HTSD H+G+ S E A L + + + Q DA++++GD++D PP+ A Sbjct: 1 MRFIHTSDLHIGKTVGGFSMLEEQDAALKQITDYVKERQADAVLLSGDLYDRSVPPAAAV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 T+++ F+ L + G ++ +AGNHD + + I+ + + + D Sbjct: 61 TMFDLFLTGLSELGVTILAIAGNHDCGERIGFANRILEKRGLYLEGKLEDPVRFVDIPDQ 120 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 + PF RP ++ + + ++ + I + L Q ++ Sbjct: 121 WGAVRVHLAPFARPAEVKSLYRCGSSMKTFEESFEEILRHVTYSPGGRDILMAHQ--FVV 178 Query: 181 ATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGS 240 G L + SD+ + +G D A F P Y ALGHIH Q I G + V Y GS Sbjct: 179 NQGLLPEL----SDSETRVSVGGTDQVEAALFQPFCYTALGHIHGCQQI-GKQPVYYSGS 233 Query: 241 PIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASI 289 P+ SF EC K V S+E L + M ++G L+ + Sbjct: 234 PVKYSFSECSHQKSVLYGEVGKDGKVSLERLPLTPVHDMRKIRGRLSDL 282 >UniRef50_C6VTU7 Nuclease SbcCD, D subunit n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VTU7_DYAFD Length = 406 Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 102/359 (28%), Positives = 155/359 (43%), Gaps = 57/359 (15%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHT+DWH+G+ + SR E + LD + E A+ VDAI++AGD+FD +P S A Sbjct: 1 MKILHTADWHIGKKLDNFSRLEEQRLVLDEICEIAEHEAVDAIVIAGDLFDNFNPSSEAT 60 Query: 61 TLYNRFVVNLQQTGCHLVV-LAGNHDSVATLN----------------ESRDIMAFLNTT 103 L + L G V+ +AGNHDS + + +I F Sbjct: 61 ELLYSTLHRLSANGTRAVIAIAGNHDSPERIQVPDALAKVCGILFVGFPNTEIRPFCTQG 120 Query: 104 VVASAGHAPQILPRRDGTPGAVLCPI-----PFLRPRDIITSQAGLNGIEKQQHLLAAIT 158 V AP L + P A P+ P+ + + T G+E+ + A+ Sbjct: 121 QVDIIKTAPGFLEIK--LPNAAF-PLRVLHTPYANEQRLKT----FLGVEESEE---ALR 170 Query: 159 DYYQQHYADACKLRGDQPLPIIATGHLTTV--GASKSDAVRD----IYIGTLDAFPAQNF 212 + QQH+ D + HL + G + D ++IG A +NF Sbjct: 171 IHLQQHWQQLADEHLDNNGFNLLATHLFVMQKGGEMPEEPDDERPILHIGGAQAIYTENF 230 Query: 213 PP-ADYIALGHIHRAQIIGGMEH-VRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVEN 270 P YIALGH+HR + + Y SP+ SF E ++KYV L+ GKL Sbjct: 231 PKQVHYIALGHLHRFHQVDKVPAPAVYSSSPLAYSFSEANQNKYVILIEAEAGKL----- 285 Query: 271 LNVPVTQPMAVLKG------DLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRK 323 V T P+ +LKG SI +E + S++ +++ I +D YL +K Sbjct: 286 --VGYT-PIELLKGKKLRRKSFHSIDEAIEWLGEHSED---LIELTIISDNYLEASDKK 338 >UniRef50_A9KNM2 Nuclease SbcCD, D subunit n=12 Tax=Bacteria RepID=A9KNM2_CLOPH Length = 375 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 74/261 (28%), Positives = 119/261 (45%), Gaps = 15/261 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ +H SD H+G+ S + L +LE A + DA+++AGDV+D P Sbjct: 1 MKFMHLSDLHIGKRVNEFSMIEDQTYILQKILELADEEKPDAVLIAGDVYDKNLPTIEGV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQI--LPRR 118 L + F+ +L + + +++GNHDS LN + I+ N V + + +I Sbjct: 61 NLLDDFLSDLHKRKIPVFMISGNHDSAERLNFASRILR--NNEVYIAGTYQGEIARYTLN 118 Query: 119 DGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLP 178 DG + +PF++P + GIE + AI + + A+ L Q Sbjct: 119 DGHGPVNIYLLPFVKPA---IASVYHEGIESYHDAVKAILAAAKVNKAERNILVAHQ--- 172 Query: 179 IIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYC 238 + G ++ +I +G LD F +Y+ALGH+H Q I G + VRY Sbjct: 173 FVTAGDISPECCDS----ENISVGGLDNVDVSVFDDFEYVALGHLHGPQRI-GRDTVRYA 227 Query: 239 GSPIPLSFDECGKSKYVHLVT 259 GSP+ SF E + K V +VT Sbjct: 228 GSPLKYSFSEAKQKKSVTMVT 248 >UniRef50_C7N5B0 Exonuclease SbcD n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N5B0_SLAHD Length = 381 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 87/302 (28%), Positives = 137/302 (45%), Gaps = 32/302 (10%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M++LH SD H+G+ + + + L +++T + VDA+++AGD++D SP + A Sbjct: 1 MKLLHVSDLHIGKRVHEFPMIEDQRHILAQIVDTIRERDVDALLIAGDIYDKSSPSAEAV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 L++ F+ + + +AGNHDS + + ++A N + A + D Sbjct: 61 ALFDDFLCAVADLNVPCLAVAGNHDSQERIAYASRLLASRNVYLSPVFDGAIDHVTLHDE 120 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADA-CKLRGDQPLPI 179 IP+LR +I + D + Y DA KL G + Sbjct: 121 HGPVTFWLIPYLRFSEI-----------------KSCFDEFDGDYTDAMAKLIGQSGVNP 163 Query: 180 ----IATGH----LTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG 231 +A H +V +SD+ IG +D A+ F DY+ALGHIHR Q I G Sbjct: 164 EERNVALAHQFVTWQSVQPERSDSEIG-NIGGVDNIDARAFDVFDYVALGHIHRPQRI-G 221 Query: 232 MEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVT--QPMAVLKGDLASI 289 + VRY GSP+ S E K + LVT GK SV+ VP + ++G LA + Sbjct: 222 RDTVRYSGSPLKYSISEAPWPKSMPLVTL--GKKGSVDFELVPFKPLHDLREIRGPLADL 279 Query: 290 TA 291 T+ Sbjct: 280 TS 281 >UniRef50_A5ZTK8 Putative uncharacterized protein n=3 Tax=Firmicutes RepID=A5ZTK8_9FIRM Length = 405 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 97/414 (23%), Positives = 181/414 (43%), Gaps = 52/414 (12%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ H SD H+G ++ + + LD + E A+ + DA+++AGD++D P + A Sbjct: 24 MKFFHLSDLHIGLKLMNRDLREDQEYILDEITELARRKRPDAVVIAGDIYDKAVPSAEAV 83 Query: 61 TLYNRFVVNLQQT--GCHLVVLAGNHDSVATLNESRDIMAFLNTTVVA----SAGHAPQI 114 +++ F+V L + +++++GNHDS +N R +++ N +V + + Sbjct: 84 EVFDHFLVGLTEAVPDAVIMMISGNHDSAPRVNCFRKVLSGQNIYMVGQPPRTESEYIEK 143 Query: 115 LPRRDGTPGAVLCPIPFLRP---RDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 + D +PF++P + ++ N + + L I K+ Sbjct: 144 VTLNDAYGEVNFYLLPFVKPSMVKQVVGVDENGNNLSYNETLHRLIGRE---------KI 194 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVR----DIYIGTLDAFPAQNFPPADYIALGHIHRAQ 227 D+ +++ G + D R +G +D A DY+ALGHIH+ Sbjct: 195 NSDERNVLVSHQFYLPSGKNAEDVERMDSEMRTVGNIDEVSADVLEKFDYVALGHIHKPM 254 Query: 228 IIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFS-NGKLESVENLNVPVTQPMAVLKGDL 286 +G E RYCG+P+ S E + K + +V G++++ P+ Q + V+KG L Sbjct: 255 KVGS-ELYRYCGTPLACSVSEAQQQKGIIMVEMGVKGEIKTTILPLEPLRQ-VKVVKGTL 312 Query: 287 ASITAQ-LEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQR 345 + + + + V V LD+ D+Q +I+ +L L +RR +++ Sbjct: 313 EEVLKESCKDYVTVILTDKVDLDV--------IDMQERIRLAFPNL----LEIRRENQRK 360 Query: 346 ERVLASQQRETL---SELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAG 396 + Q E L EL L++LDE ++ LQ + LHT+ G Sbjct: 361 TDYTRTLQTEELLDPYELCCS-------FLKDLDEEEKMILQDV----LHTVQG 403 >UniRef50_Q6GH61 Nuclease sbcCD subunit D n=52 Tax=Staphylococcus aureus RepID=SBCD_STAAR Length = 373 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 98/415 (23%), Positives = 170/415 (40%), Gaps = 70/415 (16%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+I+HT+DWHLG+ K + LD +E + + D I++AGD++DT P A Sbjct: 1 MKIIHTADWHLGKILNGKQLLEDQAYILDMFVEKMKEEEPDIIVIAGDLYDTTYPSKDAI 60 Query: 61 TLYNRFVVNLQ-QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L + + L + +++++GNHD LN AS Q+ R D Sbjct: 61 MLLEQAIGKLNLELRIPIIMISGNHDGKERLNYG------------ASWFENNQLFIRTD 108 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQP--- 176 T I S +NG+ A +++ +HY + + Q Sbjct: 109 FTS---------------INSPIEINGVNFYTLPYATVSE--MKHYFEDDTIETHQQGIT 151 Query: 177 ------LPIIATG-------HLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHI 223 P I G HLT G SD+ R + IGT+++ F DY+ LGH+ Sbjct: 152 RCIETIAPEIDEGAINILISHLTVQGGKTSDSERPLTIGTVESVQKGVFDIFDYVMLGHL 211 Query: 224 HRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLK 283 H I + ++Y GS + SF E G++K VT ++G + V P+ Q + ++ Sbjct: 212 HHPFSIED-DKIKYSGSLLQYSFSEAGQAKGYRRVTINDGIINDVFIPLKPLRQ-LEIIS 269 Query: 284 GDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLH-------DIQRKIQALTESLPVEVL 336 G+ + + ++ D YLH I + +L + P + Sbjct: 270 GEYNDVINEKVHVKN--------------KDNYLHFKLKNMSHITDPMMSLKQIYPNTLA 315 Query: 337 LVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTL 391 L + E A + E ++S+ E+F + +EL + Q +++++ L Sbjct: 316 LTNETFSYNEENNAIEISEK-DDMSIIEMFYNHITDKELSDIQSNKIKNILENEL 369 >UniRef50_D0LLB1 Nuclease SbcCD, D subunit n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LLB1_HALO1 Length = 423 Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 88/313 (28%), Positives = 143/313 (45%), Gaps = 41/313 (13%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M++LH SDWHLG+ Y SR ++H A +D ++E A+ D ++ GD+FDT PSY Sbjct: 1 MKLLHVSDWHLGRTTYGASRASDHDAVIDQMVEEARALGPDLVLHTGDLFDTAR-PSY-- 57 Query: 61 TLYNRFVVNLQQTG--CHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRR 118 R V L++ +VV+ GNHDS A L ++ + AS PRR Sbjct: 58 DDMQRGVDALERLAALAPVVVVRGNHDSAALLALFSRMLGARSRIHFASH-------PRR 110 Query: 119 DGTPGAV-----------LCPIPFLRPRDIITS---QAGLNGIEKQQHLLAAITDYYQQH 164 G + + +PF+ ++ G+ ++ + I D Sbjct: 111 PKQGGVLDFDSADGHRVRVAVLPFVHAGRVVRGFEDATSWTGVYAKR--IRGIVDVLDGA 168 Query: 165 YADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIH 224 A+ + D ++ HL GA+ S++ R I++ A A + P Y A GHIH Sbjct: 169 LAEDFRPERDV---LLFAAHLHVDGATLSNSERAIHVSDDYASRADHLPRVSYAAFGHIH 225 Query: 225 RAQII--GGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVL 282 + Q + G+ Y GSP+ L F E G+ K + VT + G+ E +++P+T+ Sbjct: 226 KPQALPSSGVTGA-YAGSPLQLDFGEVGEQKRMVAVTAAPGR--PAEVVSIPLTRGR--- 279 Query: 283 KGDLASITAQLEQ 295 +L + T LE+ Sbjct: 280 --ELRAFTGTLEE 290 >UniRef50_B9JT06 ATP-dependent dsDNA exonuclease protein n=3 Tax=Alphaproteobacteria RepID=B9JT06_AGRVS Length = 379 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 76/288 (26%), Positives = 127/288 (44%), Gaps = 40/288 (13%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHT+D HLG+ S + + A LD +++ +T + D +I+AGD+FD +PP+ A Sbjct: 1 MKILHTADLHLGRQLNGLSLDEDQDAILDQIVDALRTTRADILIIAGDIFDRAAPPATAV 60 Query: 61 TLYNRFVVN-LQQTGCHLVVLAGNHDS------VATLNESRDIM-----AFLNTTVVASA 108 +N F+ +T + ++AGNHDS +A + + R + A T +V Sbjct: 61 RQFNAFLSRVAAETTAAVAIIAGNHDSGDRIGAMAIMTDRRRALIQGPIARDMTPLVLHD 120 Query: 109 GHAPQILPRRDGTPGAVLCPIPF---LRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHY 165 H P +PF R+ A I Q +LAA ++ Sbjct: 121 AHGP-----------VAFSALPFAYEFAARECFADPA----IATPQDVLAAQVADARRSL 165 Query: 166 ADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIY-IGTLDAFPAQNFPPADYIALGHIH 224 + + + H G + + R + +G ++ + F A Y+ALGH+H Sbjct: 166 PEGARW--------VVIAHAFVAGGTSGETERPLARVGGIETVSPEIFDGAHYVALGHLH 217 Query: 225 RAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLN 272 R Q + H+RY GSP+ SF E + K + LV +E ++ Sbjct: 218 RPQHVSA-PHIRYSGSPLAFSFGEASEQKSMTLVDLDADGRVRIETID 264 >UniRef50_Q73RC0 Nuclease SbcCD, D subunit, putative n=1 Tax=Treponema denticola RepID=Q73RC0_TREDE Length = 383 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 95/402 (23%), Positives = 177/402 (44%), Gaps = 39/402 (9%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHT+D HLG++ Y + + LD + + A+I+AGD++D PP+ Sbjct: 1 MKILHTADLHLGKSLYESPQIERQKKMLDDIHKILLKDDYAALIIAGDIYDRSIPPAEYV 60 Query: 61 TLYNRFVVNLQQT--GCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGH--APQILP 116 L++ F+ + + + ++ GNHDS L+ I++ N + A G +P I+ Sbjct: 61 ALFDSFLSAVHKDCPNTAVFIIPGNHDSAERLSFGSKILSSSNIHIAAGIGKLCSPIIIA 120 Query: 117 RRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQP 176 + L +PFL G E + L + ++ Q+ + K D Sbjct: 121 QNGEKVQFFL--MPFL--------HLGSFSEENSELKLTSQSEMAQEA-SRRLKEAVDPS 169 Query: 177 LPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVR 236 +P + H+ T+ S + R ++GT + F Y ALGH+H+ Q + + + Sbjct: 170 MPSVLAAHIFTLNGESSSSER-AFLGTAEYVSPALFDFFTYTALGHLHKMQKV--TDRMY 226 Query: 237 YCGSPIPLSFDECGKSKYVHLVTF---SNGKLESVENLNVPVTQPMAVLKGDLASI--TA 291 Y G+P+ +FDEC K V V + G VE + + + M+ L+G T Sbjct: 227 YSGAPLTYAFDECSTEKVVLSVDVDCKTQGFPVRVEKIPISPLRKMSRLEGSFFEFFNTD 286 Query: 292 QLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLAS 351 + + ++D +L+I +T IQ + L + P L+ +E L Sbjct: 287 KFDAYKD------DFLEINLTGSAV---IQSPMSLLQQKFPY---LLNLHQEAVAAELKD 334 Query: 352 QQRETLSELSVEE---VFNRRLALEE-LDESQQQRLQHLFTT 389 +++ + + ++E+ +F + E+ +DE + Q LF + Sbjct: 335 EEQIHILKKNIEDEDVIFENFMLFEKTIDEEPSAKKQELFKS 376 >UniRef50_C7MLN3 Exonuclease SbcD n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7MLN3_CRYCD Length = 409 Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 98/362 (27%), Positives = 149/362 (41%), Gaps = 55/362 (15%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ +H +D H+G+ S E + L+ + A +V A+I+AGDVFD P A Sbjct: 1 MKFIHIADLHIGKRVRGFSLIDEQKYTLEQVASYAVQEKVHAVIIAGDVFDKPVAPLEAL 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 + F L +V +AGNHDS L+ + + PQ L + Sbjct: 61 DVLEEFFATLATAHIPVVAIAGNHDSAERLSFGARFREEQFVHIARAFSATPQFLDFTEA 120 Query: 121 TPGA------VLCP-------IPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYAD 167 + + P IPF+RP + +A H AI + Y D Sbjct: 121 NNDSKEENKEKVAPLRVRVHLIPFVRP---VHVRAAF------PHQAEAIAN-----YTD 166 Query: 168 ACKLR-GDQPL-----PIIATGHLTTVGASKSDAVRD--IYIGTLDAFPAQNFPPADYIA 219 A ++ +QPL ++ G S+ + + +G LD+ A F DY+A Sbjct: 167 ALRVACANQPLIEKDANLLVAHQFVVHGESEPETCESETVSVGGLDSVQASVFDAFDYVA 226 Query: 220 LGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFS------------NGKLES 267 LGHIH AQ + G + +RY GS P SF E G+ K V L+ S K S Sbjct: 227 LGHIHTAQSV-GRDTIRYSGSIFPYSFSEAGREKSVTLIDISPSITGANTSPGATNKRLS 285 Query: 268 VENLNVPVTQPMAVLKGDLASITAQLEQW-RDVSQEPPVWLDIEIT-TDEYLHDIQRKIQ 325 V ++P+ + L IT E+ R +P + +T TD+ L + KI+ Sbjct: 286 VTTRSLPLHE-----NRTLREITGSFEELARTAPSDPHADDYLHVTLTDDALMNAMEKIR 340 Query: 326 AL 327 AL Sbjct: 341 AL 342 >UniRef50_A7VZC9 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VZC9_9CLOT Length = 384 Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 80/310 (25%), Positives = 135/310 (43%), Gaps = 28/310 (9%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDW-LLETAQTHQVDAIIVAGDVFDTGSPPSYA 59 M+ +HTSDWHLG+ Y +S + + F+ L Q D +I+AGD++D P A Sbjct: 1 MKFIHTSDWHLGKMIYGRSLLEDQEYFIKQVFLPAVDREQPDFVILAGDIYDRQIAPVEA 60 Query: 60 RTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ-ILPRR 118 L++ V + +++GNHD L ++ + A A + IL + Sbjct: 61 IRLFDWTVSEMAGREVPFFLISGNHDGADRLCVGARLLRKSGIYLTARLEDAFEPILLEK 120 Query: 119 DGTPGAVLCPIPFLRP---RDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQ 175 +G + +P+ P RD++ + E + +L+ + + + D Sbjct: 121 NGESVQIFL-LPYFEPAEARDVLGDDSIRGFSEAYEAVLSRLEE------------KRDP 167 Query: 176 PLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHV 235 LP + H G++ SD+ +Y+G A F Y ALGH+H Q G + Sbjct: 168 ALPSVLVSHCFVAGSTASDSESTLYVGGSGEVGAGCFRNFTYAALGHLHGPQKAGA--NG 225 Query: 236 RYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQ 295 Y GSP+ SFDE + K +VT K + VPV PM ++ ++TA +Q Sbjct: 226 WYSGSPLCYSFDEEKQKKGCTVVTL---KGYETDCRQVPVV-PMRPMR----TLTAAFDQ 277 Query: 296 WRDVSQEPPV 305 + ++ P Sbjct: 278 LMEEGKKSPC 287 >UniRef50_C6D8R4 Nuclease SbcCD, D subunit n=81 Tax=Bacillales RepID=C6D8R4_PAESJ Length = 389 Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 80/300 (26%), Positives = 130/300 (43%), Gaps = 26/300 (8%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ HT+DWHLG+ + + L+ + + DA+I+AGD++D PP+ A Sbjct: 1 MKFFHTADWHLGKLVQGVYMTEDQRYVLEQFASAVELERPDAVIIAGDLYDRAIPPTEAV 60 Query: 61 TLYN----RFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVA--SAGHAPQI 114 L + R VV L ++ ++GNHDS ++ +M + H P + Sbjct: 61 DLLDELLERIVVGLDTP---VLAISGNHDSPDRIDFGTAMMESRGLHIAGRLRTEHKPVV 117 Query: 115 LPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGD 174 L +D + +P+ P + + N I + AIT H A + Sbjct: 118 L--KDAFGEVHVHLVPYADPAQVRITYEDEN-IRTHDEAMRAITGRIASHMDPAARH--- 171 Query: 175 QPLPIIATGH--LTTVGASK---SDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQII 229 I GH +T GA++ SD+ R + IG + A F P Y ALGH+H+A + Sbjct: 172 -----IVVGHAFVTATGAAEPNTSDSERPLSIGGAEHVRADYFAPFHYTALGHLHQAHFV 226 Query: 230 GGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASI 289 G E +RY GSP+ S E +K +V G ++E + + M + G + I Sbjct: 227 GS-EKIRYAGSPLKYSISEEHHNKGYLVVEMDAGGNVAIEKRELKPLRDMRRIAGPIEEI 285 >UniRef50_Q49XE0 Nuclease sbcCD subunit D n=12 Tax=Staphylococcus RepID=SBCD_STAS1 Length = 376 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 79/274 (28%), Positives = 123/274 (44%), Gaps = 31/274 (11%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+I+HT+DWHLG+ KS + LD +E + Q D I++AGD++DT P A Sbjct: 1 MKIIHTADWHLGRILNGKSLLEDQAYILDKFIEAMKLEQPDVIVIAGDLYDTSYPNKDAI 60 Query: 61 TLYNRF--VVNLQQTGCHLVVLAGNHDSVATLNESRDIM----AFLNTTVVASAGHAPQI 114 L + ++NL+ + L+++ GNHDS LN ++ T + + + P Sbjct: 61 QLLEQTIDILNLEMS-IPLIMINGNHDSKERLNYGSKWFEKSHMYIRTDL--NDMNKPVT 117 Query: 115 LPRRD--GTPGAVLCPIP-FLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 + D P A + + F + I T Q LN + LA Y D K+ Sbjct: 118 IGNVDFYTMPFATINEMQYFFDDKAIETHQQALNRV------LA-----YMHEVIDENKV 166 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG 231 I GHLT G +S++ R + IGT+++ F D + LGH+H I Sbjct: 167 N-------IFVGHLTVQGGIRSESERPLTIGTVESVDENLFNQFDRVMLGHLHHPFSIES 219 Query: 232 MEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKL 265 + Y GS + SF E + K +V N K+ Sbjct: 220 -NFINYSGSLLQYSFSETKQPKGYKIVEIKNQKI 252 >UniRef50_D2MLP9 Exonuclease SbcCD, D subunit n=1 Tax=Bulleidia extructa W1219 RepID=D2MLP9_9FIRM Length = 376 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 68/256 (26%), Positives = 115/256 (44%), Gaps = 16/256 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ H D HLG+ S + + LD +L ++H+VD +++AGD++D P S A Sbjct: 1 MKFAHIGDLHLGKILNGHSLLEDQRYILDQILHHLKSHRVDCLLIAGDIYDKTIPSSEAT 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 + N F+ L + ++++++GNHDS + L N + + P +L G Sbjct: 61 EVLNHFLKCLNEQKINVILISGNHDSASRLAFGSSFFKQGNVFIQTHYSNQPIVLEDEYG 120 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 + IP++ DI + G+E+ L +Q D K I Sbjct: 121 LID--VYAIPYMNRFDIKKAL----GLEETPSLKEGYHRLLEQLNLDLEKRN-------I 167 Query: 181 ATGHLTTVGASK--SDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGME-HVRY 237 H +G S+ D+ ++ IG L+ + DY+ALGHIH+ + I + +RY Sbjct: 168 LVAHQFVLGVSEPGEDSSEELLIGGLEEVSSPILEDFDYVALGHIHKPETILNLSGRIRY 227 Query: 238 CGSPIPLSFDECGKSK 253 GSP+ S E + K Sbjct: 228 SGSPLAYSKAEANQLK 243 >UniRef50_B5HB15 Nuclease SbcCD n=1 Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5HB15_STRPR Length = 412 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 92/322 (28%), Positives = 135/322 (41%), Gaps = 50/322 (15%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR+LHTSDWHLG F+ +RE + A L ++ AQ Q D I+ +GD+F P A Sbjct: 1 MRLLHTSDWHLGHIFHGHAREEDFDAVLAEIVAIAQESQPDLIVHSGDLFHHSRPTIRAM 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASA-GHAPQILPRRD 119 + ++ L VVLAGNHDS A +N + A + P D Sbjct: 61 SRAMDTLIELAAI-APTVVLAGNHDSPAYFK----FFGSMNGPLRGRGLFFADRFRPADD 115 Query: 120 GTPGAV------------LCPIPFLRPRDIITSQA----------GLNGIEKQQHLLAAI 157 G G + L +PF+ P A G+ G++ Q L+ A+ Sbjct: 116 G--GVLTFDACGGEQQIRLAVLPFVHPNHFWQHSATGTSYADYAEGMRGLQAQ--LMRAM 171 Query: 158 TDYYQQHYADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPA--QNFPPA 215 + Y D+ + + A H+ GA S R + D F +N P Sbjct: 172 HEGYDP----------DRDILLFAA-HVYVTGAQGSRGGRAVD----DRFETGPENLPEV 216 Query: 216 DYIALGHIHRAQIIGGMEHV-RYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVP 274 Y ALGHIHR Q + G + + RY GSP+ + F E +SK V +V G+ + Sbjct: 217 SYAALGHIHRPQPVRGAKCIARYAGSPLAMDFGEADESKSVVIVDADPGRPVRALPRRLS 276 Query: 275 VTQPMAVLKGDLASITAQLEQW 296 + +A G L + A Q+ Sbjct: 277 SGRRLAHFPGTLEELKAAAAQY 298 >UniRef50_B4U9G5 Nuclease SbcCD, D subunit n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U9G5_HYDS0 Length = 380 Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 65/296 (21%), Positives = 129/296 (43%), Gaps = 17/296 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYA- 59 ++ LH D H G+ +S+SR + + + +++ + VD I++AGD+FD +P + A Sbjct: 2 IKFLHIGDIHAGKTLHSRSRNDDAEYAISQVIDFVKKEPVDFILMAGDIFDQYTPDAEAT 61 Query: 60 RTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 + +++ V L +V++ GNHD + + + + N + I+ +D Sbjct: 62 KIIFDFMVSELNALKIPVVMITGNHDGHSFFEGYKTLAKYANMHLFVKPSTKDYIITIKD 121 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 ++C +P++ + I+ N + H + +++ +A + + Sbjct: 122 TN---IIC-VPYVFTK-ILDKTWEDNAASEYAHKV--------ENFINALISKAPRNTFN 168 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFP---AQNFPPADYIALGHIHRAQIIGGMEHVR 236 I H+ A + + R+ IG A N DY+ALGH+H+ Q I Sbjct: 169 ILLSHMMVKSAKPTKSEREASIGEYYAINLDNINNLKNLDYVALGHVHKYQKIPTTTDTY 228 Query: 237 YCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQ 292 Y GS + F+E G+ KY + V VE + + + + LK + S+ + Sbjct: 229 YTGSCFQIDFNEEGQEKYFNFVILEQQSTNKVEKIKLDIKNQLKTLKVNAKSLNIK 284 >UniRef50_C2EEA5 Exonuclease n=1 Tax=Lactobacillus ruminis ATCC 25644 RepID=C2EEA5_9LACO Length = 375 Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 94/393 (23%), Positives = 171/393 (43%), Gaps = 40/393 (10%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ LHT+DWH+G+ + E L L + A +VDAI++AGD++D G P + Sbjct: 1 MKFLHTADWHVGRKLHGYDLSTEQADALRKLEKIAIDEKVDAIVIAGDIYDRGMPSEDSV 60 Query: 61 TLYNRFVVNLQ-QTGCHLVVLAGNHDS---VATLNESRDIMAFLNTTVVASAGHAPQILP 116 + N + L + G L+ ++GNHDS ++T +E + +F T + A ++ Sbjct: 61 RMVNGALKKLNLEDGFPLLAISGNHDSAERLSTGSEWFEATSFYLHTKLERAAEPIEM-- 118 Query: 117 RRDGTPGAVLCPIPFLRPRDIITSQAGLNG---IEKQQHLLAAITDYYQQHYADACKLRG 173 G +P+ I++ G ++ + I ++ + D K Sbjct: 119 -----SGVQFFLMPYFE----ISAAKNFLGDETLKTADQCVRRIVSLMKERFKDGFKH-- 167 Query: 174 DQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGME 233 + GH VG+ KSD+ +G L+A DY+ALGH+H+ + E Sbjct: 168 ------VLVGHFFAVGSLKSDSETPSEVGGLEAVGIDELECFDYVALGHLHQHR-ASKSE 220 Query: 234 HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKL--ESVENLNVPVTQPMAVLKGDLASITA 291 V+Y GS + S E K V++V + + + +E LN + V+KG ++ Sbjct: 221 KVKYSGSLLKYSVSETSDQKGVYVVDTDSEIIAYKPLEPLN-----DVRVVKGLFENLI- 274 Query: 292 QLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLAS 351 + E +R + + V +++E I + L + P + L R + Sbjct: 275 KPENYRQIPDDDYVAVELEDRV-----PIIDVMNRLKKYYPRIIELKRVNGRVNHENNGV 329 Query: 352 QQRETLSELSVEEVFNRRLALEELDESQQQRLQ 384 + E LSE+ + + F + E+ DE Q + ++ Sbjct: 330 KNLEKLSEMDLFKTFYKDTVGEDPDEEQCKMME 362 >UniRef50_C2BSE2 Exonuclease SbcD n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BSE2_9ACTO Length = 413 Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 103/422 (24%), Positives = 180/422 (42%), Gaps = 45/422 (10%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ +HTSDWHLG++F + FL +L H+ DA++++GDV D +P Sbjct: 1 MKFIHTSDWHLGRDFMNYDLAPYQDDFLGQILAQIAAHRPDAVLISGDVLDKPNPGDADL 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDI-MAFLN-TTVVASAGHAPQILPRR 118 + F +N + ++++AGNHD + L ++ + +N T A G A +I PR Sbjct: 61 DKLSDF-LNQARRMTRVILIAGNHDGASRLGFAKGFTLPEVNIVTKAAQVGTAIEI-PRP 118 Query: 119 DGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYY-------------QQHY 165 DG GA++ PIP+L P T + + +HL A+ + + Sbjct: 119 DGELGALVYPIPYLYPYQDRTELSTWVDTDGVRHLDDALDPPPSEDDPDPVFPGKPEALF 178 Query: 166 ADACKL------RGDQPLPIIATGHLTTVGASKSDAVRD---IYIGTLDAFPA--QNFPP 214 A A + R D +P++A H + + + + I + LD + Sbjct: 179 AAALRRIARDLHRRDTDVPVLAMAHDFLSPVREMEPLGNLSPIPVSLLDDLAGGLKGGRG 238 Query: 215 ADYIALGHIHRA-QIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNV 273 DY+ALGHIH+A Q+ G Y GSP+P E + + N ++E V+ L + Sbjct: 239 IDYLALGHIHQAFQLSGTNVAAWYAGSPLPYRVSEHNVKGTLLVQIDPNHQVE-VQRLAL 297 Query: 274 PVTQPMAVLKGDLASIT----AQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTE 329 + + L+G + +T + ++W + I +T + +++A+ Sbjct: 298 ELPYEVKQLEGSIEDLTNPADPRYQRWHH------AFCSINLTETILPPNAYNRLKAV-- 349 Query: 330 SLPVEVLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTT 389 P + L R E + + + LSEL + F R ++ E L+ LF Sbjct: 350 -FPRMLTLTHRQDSLPETLSSGTEFRELSELEIATEFLRTCGIDT--EEDLALLRKLFEN 406 Query: 390 TL 391 T Sbjct: 407 TF 408 >UniRef50_UPI00016C3AE3 ATP-dependent dsDNA exonuclease n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3AE3 Length = 411 Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 93/353 (26%), Positives = 149/353 (42%), Gaps = 35/353 (9%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHT+DWHLG R + + ++ + + VD ++VAGD+F + P R Sbjct: 1 MRILHTADWHLGDRLGRIDRTDDLRRAVERVAAHCKEQNVDVLLVAGDLFSELARPDGLR 60 Query: 61 TL---YNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILP- 116 + +TG ++ L GNHD+ M+ + T+ G +++P Sbjct: 61 ETIRHWQEVFREFLETGGTILTLTGNHDNENFCQTLVSAMSLASPTI----GRPGEVVPP 116 Query: 117 ----------------RRDGTPGAVLCPIPFLRPRDIITSQAGL---NGIEKQQHLLAAI 157 R DG P + +PF P A L + EK L++A Sbjct: 117 GRLYLAAEPTFLRLEDRTDGFPVQFVL-MPFPTPHRFFRGDAALKYGSPEEKNALLVSAW 175 Query: 158 TDYYQQHYADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPA-D 216 D ++ A + D P + + H+ G++ ++ I I + P D Sbjct: 176 ADALREIRAHP---KYDPTAPAVLSAHVHIHGSTVGPSLFRITIEEDVVVEGADLPQQFD 232 Query: 217 YIALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFS-NGKLESVENLNVPV 275 Y+ALGHIH+ Q++G H+RYCGS + E G K V LV G+ E L++P Sbjct: 233 YVALGHIHKPQVVGA-PHMRYCGSIERMDLGEQGDQKGVVLVDIGRTGRNGEPEVLSLPS 291 Query: 276 TQPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITT-DEYLHDIQRKIQAL 327 T V+ D A +L + +Q V L I T+ + L D+ R + + Sbjct: 292 TPIYEVVVLDPAQDIPRLREEFPDAQNDLVNLQIRYTSGKDQLEDVLRDLDRI 344 >UniRef50_C1I2I4 Nuclease SbcCD n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I2I4_9CLOT Length = 389 Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 71/309 (22%), Positives = 133/309 (43%), Gaps = 29/309 (9%) Query: 1 MRILHTSDWHLGQ---NFYSKSREAEHQAF-LDWLLETAQTHQVDAIIVAGDVFDTGSPP 56 M+I H DWH+G+ FY E Q F ++ + E + + D +++AGD++D PP Sbjct: 1 MKIFHMGDWHIGKLVNGFYM----TEDQEFIIEKIYEAIKKEKPDVVVIAGDLYDRSVPP 56 Query: 57 SYARTLYNRFVVNL-QQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQIL 115 +A L N+ + + + ++ LAGNHDS + + ++ +V + + Sbjct: 57 VHAVELLNKTMKKIVKDLNTKVIALAGNHDSNERVEFASSLLCDSGLYIVGNLKRKIDKI 116 Query: 116 PRRDGTPGAVLCPIPFLR---PRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLR 172 D PIP+ RD+ + Q +++ I + + + Sbjct: 117 VLEDEYGKVNFYPIPYADVPVVRDLFEDENIKTHDLAMQKIISEILNDFNE--------- 167 Query: 173 GDQPLPIIATGHLTTV------GASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRA 226 D+ +A G++T + +SD+ + + IG + +++F +Y ALGH+H Sbjct: 168 -DERNIAVAHGYVTQMKEDNFEALEESDSEKPLSIGGTEYINSKHFEKFNYTALGHLHGP 226 Query: 227 QIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDL 286 Q +G + +RY GS + SF E + K + +V +E N+ + V G L Sbjct: 227 QKVGS-DKIRYSGSLMKYSFSEVNQKKGITIVDIDENGDVDIEIYNLKPRRDFRVKTGTL 285 Query: 287 ASITAQLEQ 295 I + Sbjct: 286 EEIIKGFDN 294 >UniRef50_A6BHS2 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=A6BHS2_9FIRM Length = 391 Score = 90.5 bits (223), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 70/332 (21%), Positives = 149/332 (44%), Gaps = 35/332 (10%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ H SD H+G+ + + + + Q L ++ A+ + DAI++AGD++D P + A Sbjct: 5 MKFFHLSDLHIGKQLHRYNLKEDQQVILKEVITYAKELRPDAIVIAGDIYDKSVPSAEAV 64 Query: 61 TLYNRFVVNLQQTGCH--LVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP----QI 114 +++ F+ +L + +++++GNHDS L + +I+ + + + P + Sbjct: 65 NVFDEFLTDLSEITPEIPILIISGNHDSPDRLKYASEILKRHHIYLAGNVPERPEEHIEK 124 Query: 115 LPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACK---- 170 + D +PF++P ++ D + Y+DA K Sbjct: 125 VTLHDAYGEVDFYLLPFMKP----------------AYVKNIFVDGTPETYSDAVKEIIK 168 Query: 171 -----LRGDQPLPIIATGHLTTVGASKSDAVRDIY-IGTLDAFPAQNFPPADYIALGHIH 224 + + + + ++ S +++ +G +D + DY+ALGH+H Sbjct: 169 REKIDYKDKRNVLVSHQFYVGEKAESPETCDSEVFSVGGIDNVDIGSVKEFDYVALGHLH 228 Query: 225 RAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKG 284 AQ IG E +RYCG+ + S E ++K + +VT K E E N P+ P+ ++ Sbjct: 229 GAQCIGKPE-IRYCGTLLKYSVSESTQNKSLTVVTL-KAKGEKPEIENYPL-HPLRDVRK 285 Query: 285 DLASITAQLEQWRDVSQEPPVWLDIEITTDEY 316 ++ ++++R+ ++ + + + D Y Sbjct: 286 KKGTLDEIIKEFRETEKDDYISITLTDEIDPY 317 >UniRef50_A4XJU8 Nuclease SbcCD, D subunit n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XJU8_CALS8 Length = 419 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 92/393 (23%), Positives = 159/393 (40%), Gaps = 75/393 (19%) Query: 1 MRILHTSDWHLGQNFYSK-------SREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTG 53 +R +HT+D H G YSK SR + D +LE + + +D +++ GD+F Sbjct: 3 IRGVHTADLHFGVTTYSKETPDGLGSRVHDFFRTFDRILEYIRQNHIDLLLITGDIFKDR 62 Query: 54 SPPSYARTLYNRFVVNLQQTGCHLVVLAGNHD-----------SVATLNESRDIMA---F 99 P S R ++ + VV + + G +V++ GNHD V + E +I+ Sbjct: 63 EPNSTLRNMFYKRVVEIAKEGILVVIVPGNHDMHPFEAKHHSVKVFEIFEQENIVVMDKL 122 Query: 100 LNTTVVASAGHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITD 159 T V G +++ +P+L I EK + + I + Sbjct: 123 FETKVFDIKGERLRVI------------AVPYLYLERFIDKTIP----EKIEQIEQNIAN 166 Query: 160 YYQQHYA---DACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNF--PP 214 ++++ A D+C + +P I GH TV ++ + R I +G P P Sbjct: 167 FFEERLAEILDSC----EDDIPTILAGHF-TVNEAEVGSERMIMVGKDVKVPLSVLLHPK 221 Query: 215 ADYIALGHIHRAQIIGGME-HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNV 273 ++ALGHIH+ QI+ + + YCGSP + F E K V F K Sbjct: 222 LRFVALGHIHKPQILNSKDPAIVYCGSPDRIDFSEAQDQK--GFVVFEIEKENFWFEFKP 279 Query: 274 PVTQPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPV 333 V +P L+ DL +E+ + +I +KI++L E+ Sbjct: 280 VVVRPFYQLEIDLYEANGDVEKI-------------------LISEIDKKIKSLEENSSA 320 Query: 334 EV------LLVRRSREQRERVLASQQRETLSEL 360 V L++R +ER+ ++ E L ++ Sbjct: 321 NVKASVVKLIIRTQSLLKERLNLTKVEEYLKDM 353 >UniRef50_UPI00019735BC nuclease SbcCD, D subunit n=1 Tax=Clostridium sp. M62/1 RepID=UPI00019735BC Length = 395 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 71/270 (26%), Positives = 118/270 (43%), Gaps = 18/270 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ H SD H+G+ S +A L ++ A+ ++ DA+++ GD++D P A Sbjct: 1 MKFFHLSDLHIGKQLNGWSLRENQEAVLGQIVRYAEEYRPDAVLICGDIYDKSVPSGEAY 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMA----FLNTTVVASAGHAPQILP 116 +++ F+ L G ++V+AGNHDS L+ + I+ F+++ + G + + Sbjct: 61 SIFGGFLERLAGIGIPVLVIAGNHDSPERLSFAGQILEKERIFISSFPPSEKGERLRRVT 120 Query: 117 RRDGTPGAVLCPIPFLRP---RDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRG 173 D PF+RP R ++ +++G +Q+ + Y Q + Sbjct: 121 LSDRWGEVDFYLFPFMRPGYVRRLLAAESG-----EQEDISVQSLTYDQAFRLMLEREEI 175 Query: 174 DQPLPIIATGHLTTVGAS-KSDAVRD----IYIGTLDAFPAQNFPPADYIALGHIHRAQI 228 D + H V AS K D + G LD DY ALGH+H +Q Sbjct: 176 DSSRRNVILCHQFFVSASEKPDTCESETAVLMAGGLDQIDISALDCFDYAALGHLHGSQR 235 Query: 229 IGGMEHVRYCGSPIPLSFDECGKSKYVHLV 258 + G E RYCG+P S E K V +V Sbjct: 236 V-GRESARYCGTPYKYSVSEERHRKAVVMV 264 >UniRef50_C4FEI0 Putative uncharacterized protein n=1 Tax=Bifidobacterium angulatum DSM 20098 RepID=C4FEI0_9BIFI Length = 487 Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 112/454 (24%), Positives = 175/454 (38%), Gaps = 91/454 (20%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 +R+LHTSDWH+G+ F + L WL + VD + VAGDV+D+ P + A Sbjct: 21 IRVLHTSDWHIGRRFKGVDLLEYQRKALQWLANLIDSEHVDVLCVAGDVYDSPRPSTEAV 80 Query: 61 TLYNRFVVNLQQTGCH-----LVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQIL 115 L+N L + + ++ GNHDS L +M P + Sbjct: 81 RLFNDIFAMLGRMEVNGHPLEIIFTPGNHDSADRLGTGAALM-------------RPNVH 127 Query: 116 PRRD----------GTPGAVLC--PIPFLRP-------RDIITSQAGLNGI----EKQQH 152 R D G G L +P+L P + ++ + G G E+ + Sbjct: 128 MRCDIETIDEPVLIGIGGEQLAVYALPYLDPDLSRPVLQSMLDERGGALGAYGEQERDED 187 Query: 153 LLAAITDYYQQHYADACKL---------RGDQPLPIIATGHLTTVGASKSDAVRDIYIGT 203 A I ++ A +L R L I H GA D+ R+I +G Sbjct: 188 GHARIARSHEGVMKAAMQLIVNDLAERRRRRPALAAILMAHAFVSGAQSCDSERNISVGG 247 Query: 204 LDAFPAQNFPPA--DYIALGHIHRAQII--------------GGMEHVRYCGSPIPLSFD 247 +D+ PA F + DY+ALGH+HR Q + RY GS + SF Sbjct: 248 VDSVPAALFSNSGLDYLALGHLHRPQSVTIAQSDSDESIFHQSRTPQARYSGSLLAYSFS 307 Query: 248 EC------GKSKYVHLVTF--------SNGKLESVENLNVPVTQP-MAVLKGDLASITAQ 292 E G K V L+ L V ++V +P A ++GDL + Sbjct: 308 ESRTPPVEGNGKSVVLLDVDAASAPKTGGNALGDVRVVDVASGEPAFAQIEGDLDKVLGP 367 Query: 293 L-EQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQA-LTESLPVEVLLVRRSREQRERVLA 350 L + + D W+ I + EY H + +KI A +L + RRS + Sbjct: 368 LADAYGD------DWVSITVHLQEYPHGLYQKIDARYAHALEKNPVYDRRSSAPAH--VM 419 Query: 351 SQQRETLSELSVEEVFNRRLALEELDESQQQRLQ 384 + R + E+ V F R E+ + +++ L+ Sbjct: 420 ADMRSAVDEMDVLAGFVRYSLGREVRDDEREVLR 453 >UniRef50_B3QT16 Nuclease SbcCD, D subunit n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QT16_CHLT3 Length = 410 Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 78/291 (26%), Positives = 133/291 (45%), Gaps = 22/291 (7%) Query: 1 MRILHTSDWHLGQNFYSK--------SREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDT 52 M+ILHT+D H+G + K +R + Q D+L++TA ++DA++ GD + Sbjct: 1 MKILHTADIHIGYTTHGKLDQQAGLNTRLLDFQKSFDFLVQTALDEKIDALLFCGDAYRD 60 Query: 53 GSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAF--LNTTVVASAGH 110 +P + ++ R + + + +V++ GNHD + + F L VV Sbjct: 61 ATPSPTEQQIFARCLKPILEANIPVVMVVGNHDHPFAHGRANALQIFQELAAQVVVIDKL 120 Query: 111 APQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHY---AD 167 Q++ + G V P P R + ++ ++ L + I ++Y + AD Sbjct: 121 EVQLVETKSGLLRIVGLPWPV---RTNLFAKEAYAAFSPEE-LKSKIHEFYLEFILEQAD 176 Query: 168 ACKLRGDQPLPIIATGHL--TTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHR 225 A + + D+ +P I GHL T SKS+ + + + + A DYIALGHIH+ Sbjct: 177 ALREQPDE-IPSILAGHLHIDTAMMSKSERITLLAKDPMFSVGALAHKEFDYIALGHIHK 235 Query: 226 AQII--GGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVP 274 Q + G V Y GS +SF+EC + K +VT + K S + P Sbjct: 236 FQDLNPGNQPPVVYSGSIERISFNECDEEKGFVMVTIDDAKRVSYARVLTP 286 >UniRef50_C1XNQ0 Exodeoxyribonuclease I subunit D n=2 Tax=Meiothermus RepID=C1XNQ0_MEIRU Length = 387 Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 78/272 (28%), Positives = 113/272 (41%), Gaps = 33/272 (12%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHT+DWHLG+ + R E + L LL ++ +++ ++VAGD+FD + A Sbjct: 1 MRILHTADWHLGKVLKGRERTPEIRQALQALLGLVRSERIELVLVAGDLFDRSVVSTEAE 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 F V L++ +V+AGNHDS L +++ TV + A Q G Sbjct: 61 AAAFEFFVGLRELQVPALVIAGNHDSRERLEALSPLLSLTGATVFGNLRFAEQ-----GG 115 Query: 121 TP---GAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPL 177 GA + +PFL R ++ K LL +++ Y L L Sbjct: 116 VVEALGARVALLPFLSERRLV----------KAGDLLQGDGAEWKKTYGQGMGL----IL 161 Query: 178 PIIATG----------HLTTVGASKSDAVRDIYIGTLDAFPAQNFPPA-DYIALGHIHRA 226 +ATG HLT G + A +FP Y+ALGH+HR Sbjct: 162 KNLATGFSGDLNLLMAHLTVEGGQLGGGEFTFHTTNTYAIQPGDFPQTLSYVALGHLHRQ 221 Query: 227 QIIGGMEHVRYCGSPIPLSFDECGKSKYVHLV 258 Q + Y GS I L F E S L+ Sbjct: 222 QQVCEAPLAWYAGSLIQLDFGEGENSDRGALI 253 >UniRef50_C0EE10 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EE10_9CLOT Length = 379 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 80/299 (26%), Positives = 138/299 (46%), Gaps = 27/299 (9%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+++HTSDWH+G+ S + + FL L + DA+I+AGD++D P + A Sbjct: 1 MKVVHTSDWHIGRTLGGYSLLEDQEYFLKQLAAFLVKQRADALIIAGDLYDRAVPSAQAV 60 Query: 61 TLYNRFVVN-LQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L +RF+ + + Q ++ +AGNHDS L+ S FL + G Q + R D Sbjct: 61 ALLDRFLSDVVLQKKIPVLAIAGNHDSPERLSFSN---RFLEQGGLYLQGTVEQGVKRVD 117 Query: 120 GTPGAV-LCPIPFLRP---RDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQ 175 G V +P+L P R + +A I + A+ ++ +L G + Sbjct: 118 --LGQVHFYLLPYLEPAAVRQLFPDEA----IHSFDQAVEAVARHFLYD-----ELSGGK 166 Query: 176 PLPIIATGHLTTVGASKSDAVR----DIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG 231 + +I+ G S ++++ + +G DA F DY+ALGH+H Q Sbjct: 167 NI-LISHGFWINQSDSHENSIQFSESERSVGGSDAVDLSRFSMFDYVALGHLHAPQ--QA 223 Query: 232 MEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASIT 290 + RY GSP+ S E + K V L+ +++ + P+ + + V++G LA + Sbjct: 224 SLNARYSGSPLKYSVSEAKQKKSVTLLDIGENEIKVSAHTFAPL-RDVRVVEGALAEVV 281 >UniRef50_Q3ZXH4 Nuclease SbcD n=5 Tax=Dehalococcoides RepID=Q3ZXH4_DEHSC Length = 415 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 76/274 (27%), Positives = 126/274 (45%), Gaps = 22/274 (8%) Query: 1 MRILHTSDWHLGQNFYSK--------SREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDT 52 M+ILH +D H+G Y + SR A+ D L+ A +VD ++ +GD + + Sbjct: 1 MKILHFADLHIGVENYGRFDSATGLSSRLADFLTAFDRLVAYAIDKKVDLVVFSGDAYKS 60 Query: 53 GSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHD--SVATLNESRDIMAFLNTTVVASAGH 110 P + + R V L +G + +L GNHD + A + +I L+ V +G Sbjct: 61 RDPSQTQQREFARRVSTLASSGIQVFLLVGNHDQPNAAGRATTTEIFDTLDIANVHVSGK 120 Query: 111 AP-QILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADAC 169 A ++ R+G + +P+LR +++ N E++ + + + + A Sbjct: 121 AEVHLINTRNGP--IQIASLPWLRRSSVLSVS---NQKEEKNLSIEELNQRVESYLAGII 175 Query: 170 K-LRG--DQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNF--PPADYIALGHIH 224 + L G D+ +P I + HL+ V +K + R+I IG N P DY+ALGHIH Sbjct: 176 ENLAGQLDKNIPSILSAHLS-VNTAKVGSERNISIGYEPTVMLSNIANPAFDYVALGHIH 234 Query: 225 RAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLV 258 + Q++ V Y GS L F E K +LV Sbjct: 235 KQQVLSSAPPVIYPGSLERLDFGEEKDDKGFYLV 268 >UniRef50_C5NXT6 Nuclease sbcCD subunit D n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXT6_9BACL Length = 379 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 67/263 (25%), Positives = 111/263 (42%), Gaps = 23/263 (8%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 ++ +HT+DWH+G+ K + Q L+ L+ + D +I+AGD++D P A Sbjct: 2 VKFIHTADWHIGRKLQGKDLLEDQQVVLENLITEMKKINPDFLIIAGDLYDRSVPSKEAT 61 Query: 61 TLYNRFVVNLQQTGCHLVVLA--GNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRR 118 TL +V + C++ + A GNHDS L + + A L Sbjct: 62 TLLQELLVKI-NIECNIPIFAISGNHDSRERLAIGEAWFSKHKFYLHTRLEQAFDKLSYE 120 Query: 119 DGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQ---QHYADACKLRGDQ 175 D A + +P+ P E ++H A + + D D Sbjct: 121 D----ADIYLLPYFEP------------FEVREHFEDATLTTHNTATKRVIDEIYKNLDT 164 Query: 176 PLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHV 235 I H G ++D+ R+I +GT++ F DY+ALGH+H I E + Sbjct: 165 NKTNILVAHTFVSGGLETDSEREISVGTVENVAVGVFDRFDYVALGHLHNPNAIKE-ERL 223 Query: 236 RYCGSPIPLSFDECGKSKYVHLV 258 +Y GSP+ SF E ++K + L+ Sbjct: 224 KYSGSPMAYSFSEASQTKGMRLI 246 >UniRef50_B9MRD8 Nuclease SbcCD, D subunit n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MRD8_ANATD Length = 420 Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 69/268 (25%), Positives = 114/268 (42%), Gaps = 24/268 (8%) Query: 1 MRILHTSDWHLGQNFYSK-------SREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTG 53 +R +HT+D H G YS+ SR + D +L+ + + +D +++ GD+F Sbjct: 3 IRGVHTADLHFGVTTYSRETPDGLGSRVHDFFKTFDRILQFIRDNSIDFLLITGDIFKDR 62 Query: 54 SPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDS--VATLNESRDIMAFLN--TTVVASAG 109 P S R ++ + +V++ + G ++++ GNHD T + S + VV Sbjct: 63 EPNSTLRNMFYKRIVDISKEGVLVIIIPGNHDMHPFETKDHSVKVFEIFEQPNIVVMDKP 122 Query: 110 HAPQILPRRDGTPGAVLCPIPFL-RPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADA 168 + RD + P +L R D Q K + L +++++ + Sbjct: 123 FEVKEFEIRDEKLRIIAVPYLYLERFVDETFPQ-------KTEELDMIAANFFEKKLSQV 175 Query: 169 CKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNF--PPADYIALGHIHRA 226 D +P I GH T V A + R I +G P P ++ALGHIH+ Sbjct: 176 LDSSEDN-IPTILAGHFTVVEAQIG-SERSIMLGKDIKVPLSCLLNPKLKFVALGHIHKP 233 Query: 227 QII-GGMEHVRYCGSPIPLSFDECGKSK 253 QI+ V YCGSP + F E SK Sbjct: 234 QILHAANPTVLYCGSPDRIDFSEANDSK 261 >UniRef50_C0Z548 Putative exonuclease sbcCD subunit D n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z548_BREBN Length = 334 Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 48/133 (36%), Positives = 71/133 (53%), Gaps = 3/133 (2%) Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPP-ADYIALGHIHRAQIIGGMEHVRYC 238 + T HL +G ++D+ R I IG Q FP ADY+ALGH+HR Q + VRY Sbjct: 118 LVTSHLFVMGGKETDSERPIQIGGALTVSPQAFPKNADYVALGHLHRLQKLSDKPLVRYS 177 Query: 239 GSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRD 298 GSPI SF E G+SK V LV G+ E + + +P+A + Q+E+W + Sbjct: 178 GSPISYSFSEAGQSKAVVLVEVEPGQEVREEIIYLTSARPLARWRATEG--IEQVERWLE 235 Query: 299 VSQEPPVWLDIEI 311 ++ W+D+E+ Sbjct: 236 EGRDAGAWIDLEL 248 >UniRef50_B0MBW6 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MBW6_9FIRM Length = 378 Score = 84.0 bits (206), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 100/391 (25%), Positives = 169/391 (43%), Gaps = 24/391 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M++LH +D HLG+ + + + L +L + VD +++AGD++D PP+ A Sbjct: 1 MKLLHMADLHLGKTVNGMNFIEDQRHVLAQVLGLMEKEPVDGLLLAGDIYDRSIPPAEAV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 TL + F+ + + + AGNHDS L + + N V + + D Sbjct: 61 TLLDWFLTGTAELMVPVFLAAGNHDSGERLEFGQKLFGQQNIYVEGTLREEFPAIRLEDE 120 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 L +P+ +P + ++A E + H A+ +H D R ++ + + Sbjct: 121 YGPVCLHLLPYFKPAE---ARALFPEDEIRTH-EDAMRSVLARHPVD----RTERNVLVT 172 Query: 181 ATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGS 240 T ++SD+ + +G + F DY ALGHIH Q G E VRY GS Sbjct: 173 HQFVTGTEPVTQSDSELLLSVGGTEQISYTVFEDYDYTALGHIHGPQ-KAGRETVRYSGS 231 Query: 241 PIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRD-- 298 + SF E K V LV E E ++ VT + D+ I +LE D Sbjct: 232 LLKYSFSEEFHKKSVTLV-------ELKEKGSIIVTVYPLKPRHDMRRIKGKLEDLLDPQ 284 Query: 299 --VSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRET 356 + + ++ +T +E L D K++A ++ +E+ L +R R + V A + +T Sbjct: 285 VVEAADCEDYISAVLTDEEELADPMEKLRASYPNI-MELNLEKRQRSGGDEVYADVREKT 343 Query: 357 LSELSVEEVFNRRLALEELDESQQQRLQHLF 387 EL E F L E +E + + L+ L Sbjct: 344 PLELG--ESF-LELTCGEAEEKRMEFLKKLL 371 >UniRef50_B9EBU8 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9EBU8_MACCJ Length = 372 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 63/260 (24%), Positives = 107/260 (41%), Gaps = 27/260 (10%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+I+H D H+G+ ++ E L+ L++ +D +++AGD++D P A Sbjct: 1 MKIMHLGDLHIGKTINQQNLLEEQSILLNRLIQDIVDASIDVLVIAGDIYDRSIPSREAM 60 Query: 61 TLYNRFVVNLQQT-GCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 ++ F+ + Q +++++GNHDS L + GH I D Sbjct: 61 KVFETFIYEVNQVQKIPVLLISGNHDSAERLGYGK----------AWYKGHGMHIGTTID 110 Query: 120 ------GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRG 173 G +P++ P + + I I + +QH L Sbjct: 111 DALNPVSIDGVDFYLVPYIEPV-VARHYFEDDSIRTHHDTYKRIFEQIEQH------LNK 163 Query: 174 DQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGME 233 D+ I HL G +++ R+I +GT++ F DY+ LGH+H I E Sbjct: 164 DR--TNILVSHLFVAGGKTTESEREIIVGTIENVSLNLFDAFDYVMLGHLHTPDAIRD-E 220 Query: 234 HVRYCGSPIPLSFDECGKSK 253 V Y GS + SFDE + K Sbjct: 221 KVFYSGSIMKYSFDEVHQRK 240 >UniRef50_UPI00016C0A35 exonuclease sbcD n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0A35 Length = 382 Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 78/303 (25%), Positives = 135/303 (44%), Gaps = 25/303 (8%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+I HTSDWH+G+ + S + + L +E ++ + D II++GD++D+ +P A Sbjct: 1 MKIFHTSDWHIGKVIGNISMIEDQRHILMQFIELSKQEKPDVIIISGDIYDSPTPSISAI 60 Query: 61 TLYNRFV-VNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 TL N + V + Q + ++ G+HD+ T+ +++ N +A+ +IL + Sbjct: 61 TLLNEILTVLVMQMKIFIFIVPGDHDN--TIQLKLELLKQSN-LYLATNKLFERILFIK- 116 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 GT +PF+ P I + H + + Q+ K D Sbjct: 117 GTELYHFYLVPFIDPLLIQHTNT---------HSKISTPEQAMQYIISEIKKTIDSTSNN 167 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCG 239 I H + SK+ + +DA + F DY+ALGH+H+ +G E V Y G Sbjct: 168 ILITHNFVINYSKAKQFAA--MPNIDAINYELFADFDYVALGHLHKRAFVGRKE-VCYSG 224 Query: 240 SPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDV 299 S SF E + K ++ +T SN + V N +P+ P D + T L+ + Sbjct: 225 SIAKYSFAEENQIKGINKITISN---KYVRNEYLPLLAP-----KDFQTFTDTLDNILQI 276 Query: 300 SQE 302 Q+ Sbjct: 277 GQD 279 >UniRef50_B2HL38 DNA repair exonuclease n=1 Tax=Mycobacterium marinum M RepID=B2HL38_MYCMM Length = 410 Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 79/301 (26%), Positives = 127/301 (42%), Gaps = 22/301 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR+LH SDWHLG+ Y SR +H+A L+ + A+ + I+ GD+FD P YA Sbjct: 1 MRLLHISDWHLGRMTYRYSRAPDHEAVLEETIGYARALRPHLILHTGDLFDAFR-PGYAE 59 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMA------FLNTTVVASAGHAPQI 114 + +VV+AGNHDS A ++ F++ G + Sbjct: 60 MARGIDALQELAAIAPVVVVAGNHDSPALFRLFNQLLGEGSRIRFIDQARRPEEGGVLEF 119 Query: 115 LPRRDGTPGAVLCPIPFLRPRDIIT----SQAGLNGIEKQQHLLA-AITDYYQQHYADAC 169 D L P+PF+ ++ S + + HL+ A+ ++ Y + Sbjct: 120 PGMGDEV--IRLAPLPFVHANRMVERFEDSSTWMVTYADRIHLIEDALGRGLREGYDTSR 177 Query: 170 KLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQII 229 + ++ HL GA + R ++I + P Y A GHIHR Q + Sbjct: 178 DV-------LLFAAHLYVSGARFCGSERPLHISDAYGCRLERLPQVSYAAFGHIHRPQAL 230 Query: 230 -GGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLAS 288 + + RY GSPI L F E G+ K + +V G+ +V ++ +P+ L G Sbjct: 231 PTTVVNGRYAGSPICLDFGEEGEQKEIVIVEAEPGRPATVTTQSLSGGRPLRTLNGTFEE 290 Query: 289 I 289 I Sbjct: 291 I 291 >UniRef50_C3RMV8 Exonuclease sbcD n=3 Tax=Bacteria RepID=C3RMV8_9MOLU Length = 377 Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 77/308 (25%), Positives = 137/308 (44%), Gaps = 46/308 (14%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR +H SD HLG+ Y ++ L+ + + +++D +++AGD++D P + A Sbjct: 1 MRFVHISDIHLGKLLYQQNLLEIQADLLNQVCDYLVDNEIDVLVMAGDIYDRSVPSNEAI 60 Query: 61 TLYNRFVVN-LQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 + N F+ + + ++++AGNHDS + L +F+ + ++ G + P + Sbjct: 61 DVLNDFLTKVILKYHKKVLMIAGNHDSASRL-------SFV-SGLLRQEGLYIEAYPAKQ 112 Query: 120 GTP----GAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADA--CKL-- 171 P G +PF +P + + + + + ++ Y DA C L Sbjct: 113 MKPIEIEGVNFYLMPFFKP-------SYIRYLYEDEQIVT---------YQDAFRCYLEH 156 Query: 172 -RGDQPLPIIATGHLTTVGAS---KSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQ 227 + D P + H G S +S++ + +G + DY+ALGHIH Q Sbjct: 157 QKIDFTKPNVLITHQFIAGNSEVMRSESEAVLSVGGTEIIDVSLVKQFDYVALGHIHAPQ 216 Query: 228 IIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLA 287 I E +RY GS + SFDE ++K + VT N K+ + + QP K DL Sbjct: 217 KI-STETIRYSGSLMRYSFDEVNQTKSIVEVTIDNKKV----SYQLVSLQP----KQDLI 267 Query: 288 SITAQLEQ 295 IT ++ Sbjct: 268 KITGSFDE 275 >UniRef50_D1VDQ0 Nuclease SbcCD, D subunit n=1 Tax=Frankia sp. EuI1c RepID=D1VDQ0_9ACTO Length = 479 Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 36/97 (37%), Positives = 58/97 (59%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M +LHTSDWHLG+ + A++D L++ + +VD ++VAGDV D PP A Sbjct: 1 MLVLHTSDWHLGRRLHGFDLATAQAAYVDHLVQVTRAERVDLVVVAGDVHDRAIPPVGAL 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIM 97 L++ + L+ TG +VV++GNHD+ A L + ++ Sbjct: 61 RLFDEALSRLRDTGARVVVISGNHDAAARLGDKAGLL 97 Score = 77.4 bits (189), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 44/115 (38%), Positives = 59/115 (51%) Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCG 239 + H GA+ SD+ RDI +G PA F Y ALGH+HR Q + G +RY G Sbjct: 261 VVVAHAWVTGAAGSDSERDISVGGAAHVPAALFDGITYAALGHLHRPQRVLGRADLRYSG 320 Query: 240 SPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLE 294 SP+ SF E +K LV L VE + VPV + M +L+G L + +LE Sbjct: 321 SPLAYSFSETQDAKASLLVELGPAGLARVEPVPVPVHRRMTILRGPLEQLLTRLE 375 >UniRef50_D1BNU6 Nuclease SbcCD, D subunit n=3 Tax=Veillonella RepID=D1BNU6_VEIPT Length = 453 Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 50/145 (34%), Positives = 71/145 (48%), Gaps = 14/145 (9%) Query: 1 MRILHTSDWHLGQNFYS------KSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGS 54 MR LHT+DWHLG+ FY ++ EHQ F + +D I++AGD+FD Sbjct: 1 MRFLHTADWHLGRIFYGQYLTEDQAHVLEHQFF-----NILKDENIDGILLAGDIFDRAV 55 Query: 55 PPSYARTLYNRFVVNL-QQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ 113 PP A L++ + L L V++GNHD L R ++ + S HA + Sbjct: 56 PPIEAIELWDSIITRLAMDYKVPLFVVSGNHDGAERLEVGRSMLGQSGIHIWGSPHHALK 115 Query: 114 ILPRRDGTPGAV-LCPIPFLRPRDI 137 +GT G V +CP+PF PR I Sbjct: 116 PF-EFEGTDGKVAICPMPFSEPRRI 139 Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 1/126 (0%) Query: 159 DYYQQHYADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYI 218 D Q ++D + + + IA H +G + R + +G + Q F Y Sbjct: 224 DQMYQAWSDYLYKQVPKGMRSIAISHAFVMGGEVGGSERTLSVGGSEQVNPQAFKDFHYT 283 Query: 219 ALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQP 278 ALGH+H +Q +G + +RY GSP+ SFDE + K ++ + + V V + Sbjct: 284 ALGHLHGSQRMGA-DRIRYSGSPLKYSFDEHMQKKSFTIIDMDTKGTVDISTIPVEVKRD 342 Query: 279 MAVLKG 284 + +L+G Sbjct: 343 VVILEG 348 >UniRef50_C5RC55 Exonuclease n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RC55_WEIPA Length = 398 Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 81/307 (26%), Positives = 129/307 (42%), Gaps = 30/307 (9%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ LHT+DWH+G+ S AE Q + + A +VD +I+AGD++D G P A Sbjct: 9 MKFLHTADWHIGKELGGYSLLAEQQTAYQQIRDLAVNEEVDGVIIAGDLYDRGIAPISAV 68 Query: 61 TLYNRFVVNLQQT-GCHLVVLAGNHDSVATLNESRDI----MAFLNTTVVASAGHAPQIL 115 + +L T + ++GNHD L R+ +LNTT+ A Sbjct: 69 NSLEGMLKDLNITFKMPIYAVSGNHDGATRLGAGREWREKNQLYLNTTL------ADAFK 122 Query: 116 PRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQ 175 P T + +PF+ P + G+ E Q+ I + ++ + Sbjct: 123 PVE--TQDTQIFLLPFIEPS-MARVYYGITEDEASQY--QTINQVMPRIVSEMVAQFKPE 177 Query: 176 PLPIIATGHLTTVGASKSD----AVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG 231 ++ T H VG+ D + + +G L Q F DY+ALGH+H Q Sbjct: 178 MNHVLVT-HYYVVGSKNQDYEFTSETNSQVGGLRGLDDQLFQDFDYVALGHLHLRQ-ASP 235 Query: 232 MEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITA 291 + V+Y GSPI + E K V++V N ++ + + +P K DL +T Sbjct: 236 SDVVQYSGSPIKFNTKEAQSEKGVYIVEIKNHQVRTSWHPLLP--------KKDLILLTG 287 Query: 292 QLEQWRD 298 EQ D Sbjct: 288 TFEQLID 294 >UniRef50_Q5LYZ3 ATP-dependent dsDNA exonuclease n=8 Tax=Bacteria RepID=Q5LYZ3_STRT1 Length = 408 Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 85/381 (22%), Positives = 156/381 (40%), Gaps = 29/381 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ LHTSDWH+G+ S E + +++ A + +VD +I++GD++D PP A Sbjct: 7 MKFLHTSDWHVGRTLNGWSLLEEQEWAFQQIVDLAISEKVDGVIISGDLYDRAVPPVDAI 66 Query: 61 TLYNRFVVNL-QQTGCHLVVLAGNHDSVATLNESRDIMAF--LNTTVVASAGHAPQILPR 117 L+N+ + L + + ++GNHD L+ RD L+ + P L Sbjct: 67 KLFNKTLARLVLEEQIPVYAISGNHDGAERLHFGRDFFQHQGLHLSTRLEEAFEPIEL-- 124 Query: 118 RDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPL 177 + +PF+ P D G E Q I D D K Sbjct: 125 ----ENCQIFLLPFIDPIDARIYYKDDEGKEIQ-----GIGDALTYILEDMEKAFDPDKA 175 Query: 178 PIIATGHLTTVGASKSD--AVRDIY-------IGTLDAFPAQNFPPADYIALGHIHRAQI 228 ++ T H SD +R++ +G L + F DY+ALGHIH + Sbjct: 176 HVLVT-HFAVSKKDDSDGQGLRELMLSETSNTVGGLTNVTSDLFKSFDYVALGHIH-TRF 233 Query: 229 IGGMEHVRYCGSPIPLSFDECGKS--KYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDL 286 + V+Y GSP+ + E + K V+++ S + V +P+ L+ Sbjct: 234 ASPTKRVQYSGSPVAFNVKEAKRKEEKGVYILELDASGDMSQTFHTLEVKRPIVALQESF 293 Query: 287 ASITAQLEQWRDVSQEPPVWLDIEITTDEYLH--DIQRKIQALTESLPVEVLLVRRSREQ 344 ++ + Q+ DI++++ + L +++ +++ + + VE+ R + Sbjct: 294 ETLMSPEFYKNQPCQKAWFAFDIQLSSRKELEGINVRARLEEIYGTDIVEITFSRLGDVR 353 Query: 345 RERVLASQQRETLSELSVEEV 365 E + Q + L S +E+ Sbjct: 354 EENLTVDQHLKDLEMQSPQEI 374 >UniRef50_B2S3L6 Possible exonuclease n=2 Tax=Treponema pallidum RepID=B2S3L6_TREPS Length = 391 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 69/257 (26%), Positives = 112/257 (43%), Gaps = 15/257 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHT+D HLG+ + S A + L L A+I+AGD++D P + + Sbjct: 1 MKILHTADLHLGKTLHEVSLFASQKKMLGDLCTLLAQDNYAALIIAGDIYDRCVPSAESV 60 Query: 61 TLYNRFVVNLQQTGCHLVV--LAGNHDSVATLNESRDIMAFLNTTVVASAGHA--PQILP 116 +L++ F+ N++++ L + + GNHDS L+ +++++ + + P +L Sbjct: 61 SLFSSFLQNIKRSMPRLPIYLIPGNHDSAQRLSFAQELLKQQGVFIAQDPEESTRPHLLC 120 Query: 117 RRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQP 176 T L P + + I Q LL + Q+ A L Sbjct: 121 HEGETVQLFLLPFLHAGAFSYLDEENTTCLIHTQSELLQEASRRLQR----AVSLDT--- 173 Query: 177 LPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVR 236 P I HL T ++ R ++G F Y+ALGH+H+ Q I E + Sbjct: 174 -PSILVAHLFTQKGISCESERP-FVGNAVYADPHWFDFFTYVALGHLHKCQKI--TERMY 229 Query: 237 YCGSPIPLSFDECGKSK 253 Y GSP+P SFDE K Sbjct: 230 YSGSPLPYSFDEANTQK 246 >UniRef50_A7NIU3 Nuclease SbcCD, D subunit n=6 Tax=Chloroflexi (class) RepID=A7NIU3_ROSCS Length = 418 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 80/310 (25%), Positives = 136/310 (43%), Gaps = 24/310 (7%) Query: 1 MRILHTSDWHLGQNFYSK--------SREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDT 52 MR+LH +D H+G Y + SR ++ LD ++ VDA+++AGDV+ Sbjct: 1 MRLLHLADLHIGIENYGRVDPSTGLHSRLRDYLERLDEAIDVGLAEGVDAVLIAGDVYKN 60 Query: 53 GSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVA-SAGHA 111 +P + + R + L+ G + +L GNHD + + F V + Sbjct: 61 RTPNPTQQREFARRIHRLRACGLPVFILIGNHDVSPAAGRAHAVEIFDTLAVDGVTIADR 120 Query: 112 PQI--LPRRDGTPGAVLCPIPFLRPRDIITSQA--GLNGIEKQQHLLAAITDYYQQHYAD 167 P+I L R G P V+ +P++ ++T + + +E + L+ + + +Q D Sbjct: 121 PRIHTLQTRSG-PLQVIA-LPWVTRHALLTKEELRMASFLEIETMLIERVERFLRQAADD 178 Query: 168 ACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPA--QNFPPADYIALGHIHR 225 D LP + T H T GA+ A R + +G +P P DY+A+GHIHR Sbjct: 179 L-----DPALPAVLTVHGTIDGATFG-AERQVLLGRDLIYPRSLMALPNVDYVAMGHIHR 232 Query: 226 AQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGD 285 Q +G V Y GS + F E + K +V K E+ + +P + D Sbjct: 233 HQALGDHPPVVYPGSIERIDFGEEDEDKGCVIVDL-KAKGEAHWRFHKLAARPFVTIAVD 291 Query: 286 LASITAQLEQ 295 + SI +++ Sbjct: 292 VRSINDPMQR 301 >UniRef50_Q5SIS5 Exonuclease SbcD n=3 Tax=Thermus RepID=Q5SIS5_THET8 Length = 372 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 68/249 (27%), Positives = 102/249 (40%), Gaps = 16/249 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR+LHT+DWHLG+ R E A L LL ++ +VD ++V+GD+FD + A Sbjct: 1 MRLLHTADWHLGKLLKGVDRTPEIAAALRDLLGLVRSERVDLVVVSGDLFDRPQVSAEAE 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 F + L+ G +V+AGNHD L ++ V A + G Sbjct: 61 ACAVEFFMELKALGVPALVIAGNHDPKERLEALAPLLGLAGARVRGRLLFAEEGGVVEVG 120 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 A L +PF+ R ++ L + + YA+A + D + Sbjct: 121 GVRAGL--LPFVSERLLVRR-------------LFQEDEVLHRTYAEALRRVLDNLKSPL 165 Query: 181 ATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFP-PADYIALGHIHRAQIIGGMEHVRYCG 239 GH GA ++ A P + P Y+ALGH+HR Q + Y G Sbjct: 166 LLGHFAVEGARPGGGEFVFHLVGSYAVPRASLPLEVRYLALGHVHRQQQVSEAPVAWYPG 225 Query: 240 SPIPLSFDE 248 S + L F E Sbjct: 226 SLVQLDFGE 234 >UniRef50_B9K7R6 Exonuclease n=6 Tax=Thermotogaceae RepID=B9K7R6_THENN Length = 383 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 85/288 (29%), Positives = 117/288 (40%), Gaps = 61/288 (21%) Query: 1 MRILHTSDWHLGQNFYSKS----REAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPP 56 ++ILHT+DWH G +S S R AE LD ++E A+ VD +VAGD+ S P Sbjct: 7 LKILHTADWHFGLTSWSSSKPRDRRAEINEALDRVIEEARKEGVDLFLVAGDLLHNRSNP 66 Query: 57 SY-ARTLYNRFVVNLQQTGCHLVVLAGNHDSVAT------LNESRDIMAFLN----TTVV 105 A ++ + Q +VVL GNHD L D + FL VV Sbjct: 67 GVTAMKDVMEYLKKMLQI-APVVVLLGNHDWRGLTAFGDLLQVLSDDLVFLRYPEPVDVV 125 Query: 106 ASAGHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAIT---DYYQ 162 A G +ILP P P E+ + L A I+ D+ Q Sbjct: 126 AGRGQKVRILP----------FPYP-----------------EESEDLEAKISRGRDFRQ 158 Query: 163 QHYADACKLR--GDQPLPIIATGHLTTVGA---SKSDAVRDIYIGTLDAFPAQNFPP--A 215 KL+ G + + GH T G + ++ R+I I +N P A Sbjct: 159 WLEKKLAKLKEAGKEDFAVF-VGHFTVEGLEPYAGAEQGREIVIN-------RNLIPFFA 210 Query: 216 DYIALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNG 263 DY+ALGH+H ++ + Y GSPI L F E K LV G Sbjct: 211 DYVALGHLHGFHVVQEQPLMIYSGSPIRLDFGEEKDEKGAVLVVVKKG 258 >UniRef50_A3HX94 DNA repair exonuclease n=2 Tax=Bacteroidetes RepID=A3HX94_9SPHI Length = 414 Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 74/281 (26%), Positives = 121/281 (43%), Gaps = 27/281 (9%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 ++ILHT+DWHLG+ SR E + L+ ++E A VD +++AGD+FDT +P A Sbjct: 2 IKILHTADWHLGKRLQEFSRIEEQKLVLEEIIEVADQENVDLVLLAGDIFDTFNPNHEAV 61 Query: 61 TLYNRFVVNLQQTGCH-LVVLAGNHDSVA------TLNESRDIMAFLNTTVVASAGHAPQ 113 L + + L + G ++ ++GNHDS L I+ + + G Sbjct: 62 ELLYKTLRRLSKNGERPIIAISGNHDSTQFVEAPDPLARELGILFYSRYDSIIPIGKLDS 121 Query: 114 ILPRRDGTPGAVLCPIPFLR--PRDIITSQAGLNGIEK---QQHLLAAITDYYQQHYADA 168 + G V +P + R I+ A N ++ + A + Q+++ + Sbjct: 122 GIEITKSASGFVELKLPKIEFPVRIILAPYANENLLKTYLGEGDREAEFREILQENWLEL 181 Query: 169 CKLRGDQPLPIIATGHLTTVGASKS----------DAVRDI-YIGTLDAFPAQNFPP-AD 216 D + GH + +S ++ R I ++G A +N P Sbjct: 182 ADNYCDDNGVNLFIGHFFFMKEGESSVAIGTEAEPESERPILHVGGTQALFTKNIPSQIQ 241 Query: 217 YIALGHIHRAQIIGGMEH--VRYCGSPIPLSFDECGKSKYV 255 Y ALGH+HR + G EH V Y SP+ SF E + K V Sbjct: 242 YAALGHLHRYHSV-GHEHCPVVYSSSPLAYSFSEADQEKKV 281 >UniRef50_C7XXV6 Nuclease SbcCD n=1 Tax=Lactobacillus coleohominis 101-4-CHN RepID=C7XXV6_9LACO Length = 374 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 68/295 (23%), Positives = 122/295 (41%), Gaps = 25/295 (8%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR LHT DWH+G++ + A+ A + + + A+ QVDA+++AGD++D + PS A Sbjct: 1 MRFLHTGDWHIGKHLAGYNLLADQHATFEKIRQIAKAEQVDAMVIAGDLYDR-TIPSEAA 59 Query: 61 TLYNRFVVNLQQTGCH----LVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILP 116 T L + H + ++GNHDS L F + + + +P Sbjct: 60 T--RELTSELAELNIHDQLPIFAISGNHDSATRLGVGS--QWFTSNDFYLNTKFSQAFMP 115 Query: 117 RRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQP 176 L P L+ + + + I+ + I ++ + D + Sbjct: 116 IEFADTQLFLLPFFGLQE---VRNYFADDQIKDINTAMKKIVAAMKKRFVDGKRH----- 167 Query: 177 LPIIATGHLTTVGASKS-DAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHV 235 + H G+ ++ D+ I +G L A DY+ALGH+H + + Sbjct: 168 ---VLVAHFFAAGSQRTADSETMIEVGGLSAVNTDLLTDFDYVALGHLHNKNALQEAR-I 223 Query: 236 RYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASIT 290 +Y GSP+ S E K V +V + + VE +P + V++ + +T Sbjct: 224 KYSGSPMKFSVSEANMEKGVWIVDTAPFNIRWVE---LPAIHEIHVIESSMDQLT 275 >UniRef50_A8F497 Nuclease SbcCD, D subunit n=1 Tax=Thermotoga lettingae TMO RepID=A8F497_THELT Length = 367 Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 86/320 (26%), Positives = 130/320 (40%), Gaps = 46/320 (14%) Query: 1 MRILHTSDWHLGQNFYSKS----REAEHQAFLDWLLETAQTHQVDAIIVAGDVF-DTGSP 55 M+ILHTSDWHLG ++ S R AE + L +L+ A+ VD II+ GDV + SP Sbjct: 1 MKILHTSDWHLGLESWTGSKTVDRLAETENALRFLVTAAKKESVDLIIITGDVVHNKISP 60 Query: 56 PSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQIL 115 A + + +VL GNHD R I A N V + I Sbjct: 61 KIEALNVLTNILAEFSSLAPTFLVL-GNHD-------WRGIKALKNLPV----KNLHIID 108 Query: 116 PRRDGTPGAV-LCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGD 174 R + + G L +P+L + + G DY + D Sbjct: 109 SRTEISSGEFKLFFLPYLDFQKTLDESNDFAG------------DYLSSVFTDIRNNIDR 156 Query: 175 QPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPA-DYIALGHIHRAQIIGGME 233 + + ++A H+ G +S+ + + A P DY+ALGHIH I+ Sbjct: 157 EKINLLA-AHIMIEGLIESERENSMEV----QIKASMIPTGLDYVALGHIHALSIVEQSP 211 Query: 234 HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGD-----LAS 288 + Y GSPI + F E K +V FS G+ + ++ P Q K D L S Sbjct: 212 LMCYAGSPIAMDFGEEKDRKGAIIVDFS-GERTKIRIVDTPRKQLKTFRKTDYSEQSLES 270 Query: 289 ITAQLEQW----RDVSQEPP 304 ++ +L+ + R + PP Sbjct: 271 LSNELKSFEGYVRVIFNAPP 290 >UniRef50_C6JB59 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JB59_9FIRM Length = 1275 Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 73/290 (25%), Positives = 122/290 (42%), Gaps = 32/290 (11%) Query: 1 MRILHTSDWHLGQNFYS------KSREAEHQAFLDWLLETAQTHQVDAIIVAGDVF--DT 52 M+ILHT+DWH+GQ F R + L+++++ A+ + D + V+GDVF + Sbjct: 1 MKILHTADWHIGQ-FKGPVVDGVNLRSQDTVNCLNYMIKVAEEEKPDIVCVSGDVFHQEQ 59 Query: 53 GSPPSYARTLY--NRFVVNLQQTGCHLVVLAG--NHDSVATLNESRDIMAFL-NTTVVAS 107 P Y+ + + L ++V+ G NHD + A N +V S Sbjct: 60 IGPVRYSDEMIVATDTITKLAGVAKAVIVMRGTPNHDGGGQFRVLSKMFANTGNVHIVTS 119 Query: 108 AGHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYAD 167 P +L TP A + IP ++ + GL+ E+ + + I+ Sbjct: 120 ----PTVLR----TPYADIACIPGFDKQEFRSRFPGLSADEENEAWTSYISSM------- 164 Query: 168 ACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADY--IALGHIHR 225 LR + I H T G + + P + A Y + LGHIHR Sbjct: 165 VMGLRAECHNTSILMAHYTVPGCNMESGQTSFFTNFEPVIPREALEAAGYEAVLLGHIHR 224 Query: 226 AQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSN-GKLESVENLNVP 274 QI+ G+ +V Y G+ ++F++ G+ + + FS+ GKL N P Sbjct: 225 PQILNGLHNVFYSGAINAMNFNDEGQERGFWIHEFSDTGKLTKGHNCITP 274 >UniRef50_B6WT33 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WT33_9DELT Length = 165 Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 47/160 (29%), Positives = 80/160 (50%), Gaps = 3/160 (1%) Query: 235 VRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLE 294 +RY GSP+P+ F E +SK V L+ F+ G+ VE L VP Q + + G ++ I ++L Sbjct: 1 MRYSGSPLPMGFGEASQSKSVCLIDFA-GRSARVELLPVPEFQKLERVSGSMSDIRSRLA 59 Query: 295 QWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQR 354 RD WL++ T D+ ++++++ + VL +R +R + Sbjct: 60 ALRDSGS--SAWLEVVYTGDDLEGSLRQQVETAVAGSGLRVLKIRNARLLDSQPGLDDTG 117 Query: 355 ETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTL 394 L ELS EVF+R LA +++ +Q L L+ L + Sbjct: 118 RNLEELSETEVFSRCLAARKIEGAQADLLMRLYGEILTAM 157 >UniRef50_D1C2F9 Nuclease SbcCD, D subunit n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C2F9_SPHTD Length = 413 Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 73/286 (25%), Positives = 116/286 (40%), Gaps = 39/286 (13%) Query: 1 MRILHTSDWHLGQNFYS--------KSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDT 52 MR+LH +D HLG Y SR ++ A D +++ A H+VDA++ AGD F Sbjct: 1 MRLLHFADLHLGMENYGTLDTRLGYSSRVRDYLAAFDQVVDHAIEHRVDAVLFAGDAFKH 60 Query: 53 GSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHD--SVATLNESRDIMAFLNTTVVASAGH 110 P + + + + L V+L GNHD S+ DI A L+ + A + Sbjct: 61 RDPSPTIQREFAKRIRRLAAAEIPTVLLVGNHDLPSIDARATPMDIYATLDIPFIYVARN 120 Query: 111 APQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLN---------GIEKQQHLLAAITDYY 161 + G P V+ +P+L + ++ + N E +L+A+ D Sbjct: 121 PDVLRIETRGGPLQVVT-LPWLSRQRLLDPEQRRNPDPGAVSRAAAEATSAILSALVDQL 179 Query: 162 QQHYADACKLRGDQPLPIIATGHLTT----VGASKSDAVRDIYIGTLDAFPAQNFPPADY 217 D P + HL+ +G+ +S + + + D + F DY Sbjct: 180 ------------DPDTPAVLLAHLSIEGARLGSEQSIMLGEDLVLDTDELRVRAF---DY 224 Query: 218 IALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNG 263 +ALGHIH+ Q I Y GS + F E + K LV G Sbjct: 225 VALGHIHQHQQITARPPTVYAGSLERIDFGEEREEKGFVLVDIQPG 270 >UniRef50_A7BMU6 Exonuclease SbcD n=1 Tax=Beggiatoa sp. SS RepID=A7BMU6_9GAMM Length = 246 Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 64/241 (26%), Positives = 108/241 (44%), Gaps = 13/241 (5%) Query: 66 FVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDGTPGAV 125 F L++ V++AGNHDS + I++ L + + A Q + T Sbjct: 5 FFCQLRKANIPAVIIAGNHDSAFRIEGLSQILSHLGISALGRPKIAEQGGVIQLETAHGK 64 Query: 126 LC--PIPFLRPRDIITSQA--GLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPIIA 181 LC +PF+ R ++ S + +E++Q + ++ D R + I+A Sbjct: 65 LCVAAMPFISERRLLRSVDLWTKDEVEQRQSYQQCLAMLFENLTRD---FREEHVNIIMA 121 Query: 182 TGHLTTVGASKSDAVRDIYIGTLDAFPAQNFP-PADYIALGHIHRAQIIGGMEHVRYCGS 240 HLT A ++ + D Y + P Q P A YIALGHIH+ Q I + Y GS Sbjct: 122 --HLTIADAKRAYSEVDYYTQAIYRLPLQTLPSKAHYIALGHIHKPQHIPYVVPTAYSGS 179 Query: 241 PIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVS 300 I L F E G+ K +L+T G VE + +P+ +++ + S+ + +R +S Sbjct: 180 LIQLDFGEVGEEKGFNLITVEPGNPAQVEFKPLSCQKPLTLVRCEKQSVR---KHFRSLS 236 Query: 301 Q 301 + Sbjct: 237 R 237 >UniRef50_C0AYW7 Putative uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198 RepID=C0AYW7_9ENTR Length = 96 Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 41/82 (50%), Positives = 57/82 (69%), Gaps = 2/82 (2%) Query: 307 LDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSELSVEEVF 366 +DIE++T +YL DIQ +IQ LT +V+L+RRSR+QR+ VL ++ETL+EL+V +VF Sbjct: 1 MDIEVSTQDYLSDIQARIQELTNDPLFDVVLLRRSRKQRQ-VLTQNEKETLTELTVYDVF 59 Query: 367 NRRLALEELD-ESQQQRLQHLF 387 RRL E D E + RL LF Sbjct: 60 ERRLEQHEFDSEETKTRLTTLF 81 >UniRef50_B9NII9 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa RepID=B9NII9_POPTR Length = 265 Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 7/113 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 +R LHT+DWHLG+ F+++S + LD + + + DA+++AGDV+D PP A Sbjct: 142 LRFLHTADWHLGRLFHARSLIEDQSHVLDQFVALVRDLRPDAVLIAGDVYDRAVPPPEAV 201 Query: 61 TLYN----RFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAG 109 L + R VV+ G +V++AGNHDS L ++A V G Sbjct: 202 ALLDDVLARIVVD---AGVPVVMIAGNHDSAQRLGFGARLLAARGLHVAGRTG 251 >UniRef50_B9KXS7 Putative nuclease SbcCD, D subunit subfamily n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KXS7_THERP Length = 419 Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 89/343 (25%), Positives = 142/343 (41%), Gaps = 45/343 (13%) Query: 1 MRILHTSDWHLGQNFYSKSR-----EAEHQAFLD---WLLETAQTHQVDAIIVAGDVFDT 52 +R++H +D HLG + + R + Q FLD +++ A + DA++ AGD F Sbjct: 2 LRLIHFADLHLGVETHGQFRPDLGHSSRIQDFLDAFDQIIDAAIEERFDAVLFAGDAFKH 61 Query: 53 GSPPSYARTLYNRFVVNLQQ---TGCHLVVLAGNHDSVATLNESR--DIMAFLNTTVVAS 107 P + TL RF +Q+ G +V+L GNHD ++ S DI A L V Sbjct: 62 AEP---SPTLQRRFAERIQRLLAAGIPIVLLVGNHDRPRSVVRSTPIDIYAALRLPGVIV 118 Query: 108 AGHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYAD 167 A + P V+ +P++ PR ++ A L A T ++ Y + Sbjct: 119 ANRPERFTIATPSGPLQVVA-LPWIPPRLLLADDA----------LREAGTPELERRYKE 167 Query: 168 AC-------KLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFP----AQNFPPAD 216 D P + GHL+ G + + R + +G F N P D Sbjct: 168 VIASALAPLLAALDAATPAVFLGHLSMEGG-RFGSERSVILGNDPLFGLDELGLNSAPID 226 Query: 217 YIALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSK-YVHLVTFSNGKLESVENLNVPV 275 Y+ALGH+H Q++ V Y GS + F E + K YV + + V P+ Sbjct: 227 YVALGHLHSHQVLHERPPVVYAGSVERIDFGEEREDKGYVAVRIAAGPYPRDVSWEFRPL 286 Query: 276 -TQPMAVLKGDLASITAQLEQWRDVSQE----PPVWLDIEITT 313 T+PM + D+ + T E R + + P + + ITT Sbjct: 287 RTRPMRTFRLDILTDTPMDEIRRALERHATLIPEAIVRVTITT 329 >UniRef50_Q2S4Q6 Nuclease SbcCD, D subunit subfamily, putative n=2 Tax=Rhodothermaceae RepID=Q2S4Q6_SALRD Length = 453 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 72/297 (24%), Positives = 120/297 (40%), Gaps = 43/297 (14%) Query: 3 ILHTSDWHLGQNFYSK--------SREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGS 54 +LHT+D HLG + + +R + + L+ +++ A VDA + GD + T Sbjct: 25 LLHTADIHLGFKTHGRRDPDTGLNTRLLDVRRSLEAVVQRALDADVDAFLFCGDAYHTAD 84 Query: 55 PPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP-- 112 P + ++ + + L +V++ GNHD T + + F + P Sbjct: 85 PTPTQQDIFVQCLRPLADADIPVVLIVGNHDHPVTFGRASSLDIFDHIAGAVHCYRKPAS 144 Query: 113 --QILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACK 170 Q+L + G L P+P+ I SQ L E ++ + + ++HY + Sbjct: 145 SVQVLDTKSGP--LQLIPLPW-----PIRSQI-LAKDEYRRMSPDELRQFVEEHYVTYVQ 196 Query: 171 LR---------GDQP----------LPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQN 211 R G P +P + GH+T GA+ S + I + F Sbjct: 197 RRAAEIMEAETGITPEGTEHALSPDVPTVLAGHVTVQGAALSGSEHTTTIASEPKFTVGQ 256 Query: 212 FP--PADYIALGHIHRAQIIGGMEH--VRYCGSPIPLSFDECGKSKYVHLVTFSNGK 264 P DY+ALGH+HR Q H V Y GS ++F+E + K V LV + Sbjct: 257 LAVRPIDYVALGHVHRPQNRNEEGHPPVVYSGSIERVTFNEADEDKGVQLVDIDPAR 313 >UniRef50_C0FS04 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FS04_9FIRM Length = 154 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 59/100 (59%), Gaps = 2/100 (2%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ H SD H+G+ + + AE + L ++ A+ + DA+++AGDV+DT P + A Sbjct: 18 MKFFHLSDLHIGKQLHHYNMIAEQRDILGKIVALAEREKPDAVLIAGDVYDTPVPSAEAV 77 Query: 61 TLYNRFVVNLQ--QTGCHLVVLAGNHDSVATLNESRDIMA 98 ++++ F+ L + + ++AGNHDS ++ + DI+A Sbjct: 78 SVFDEFLTALNDLEPEVTVCIIAGNHDSAKRIDFASDILA 117 >UniRef50_A2C9B6 DNA repair exonuclease n=6 Tax=Cyanobacteria RepID=A2C9B6_PROM3 Length = 404 Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 72/277 (25%), Positives = 114/277 (41%), Gaps = 52/277 (18%) Query: 2 RILHTSDWHLGQNFYS-----KSREAEHQAFLD--WLLETAQTHQVDAIIVAGDVFDTGS 54 R LHT+DW +G+ F + K + Q L + A+ H VDA++VAGD+FD+ + Sbjct: 3 RFLHTADWQIGKPFRNITDPQKRFRLQQQRILSVSRIAAVAEEHNVDAVLVAGDLFDSST 62 Query: 55 PPSYARTLYNRFVVNLQQTGCHLVVLAGNHD--SVATLNESRDIMAFLNTTVVASAGHAP 112 PS + ++ + ++V+ GNHD + + +D+ L AP Sbjct: 63 VPSAVVMEVLEVIGSMNRP---VLVIPGNHDHGGAGGVWQRQDVQRQLKE-------RAP 112 Query: 113 --QIL--PRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADA 168 Q+L P A + P P LR RD + A I+ Q A+ Sbjct: 113 LMQLLLKPEPVLIDHAFVLPCPLLRQRD-------------SEDPSAWISQLDWQDLAED 159 Query: 169 CKLRGDQPLPIIATGHLTTVGASKSDAVRDI-----YIGTLDAFPAQNFPPADYIALGHI 223 C P I H G +D +D I +D Q+ DY+ALG Sbjct: 160 C--------PRIVLAHGAVHGFESTDYNQDSAGQSERINRIDLDMIQH-GQVDYVALGDW 210 Query: 224 HRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTF 260 H + +G + YCG+P P FD+ + + ++ F Sbjct: 211 HNLKQVG--DRAWYCGTPEPDRFDQGDQDQRGQVLVF 245 >UniRef50_A2BM15 Predicted DNA repair exonuclease n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BM15_HYPBU Length = 407 Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 81/307 (26%), Positives = 131/307 (42%), Gaps = 41/307 (13%) Query: 1 MRILHTSDWHLGQNFYSK-SREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYA 59 + +LH SD HLG Y RE + + +++ A VDA+I GD+FD+ PP+ A Sbjct: 11 LHLLHVSDTHLGYRQYGIIEREMDFYQVFEEVIDIAIREHVDAVIHTGDLFDSTRPPAQA 70 Query: 60 RTLYNRFVVNLQQTGCHLVVLAGNHDS--VATLNESRDIMAFLNTTVVASAGHAPQILPR 117 R + L+ G +VLAG+HD+ A L+ ++ + + G P + + Sbjct: 71 IRAAIRALKKLRGHGIPFIVLAGDHDTPKRANLSPLTELDEVGLAYTIGAIGDKPTTI-Q 129 Query: 118 RDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPL 177 D G +L I SQ GL+ ++HLL A + + L Q L Sbjct: 130 IDTRHGRLLV--------SGIRSQKGLHA---RKHLLDAFKQLVPRDRSTVNILLLHQAL 178 Query: 178 PIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIH-RAQIIGGMEHVR 236 +A + ++ +G L + F Y ALGHIH + G V Sbjct: 179 REVAPNY-------------EVELGEL----PKGF---SYYALGHIHLYREFRLGDAAVV 218 Query: 237 YCGSPIPLSFDECGK--SKYVHLVTFSNGKLESVENLNVPVTQPMA---VLKGDLASITA 291 Y GSP L DE + +YV LV +S+E + + + +P+ ++ LA + Sbjct: 219 YPGSPEVLRIDEAREQPQRYVVLVEVDQRSTKSLERIRLEMPRPIVYKEIIYQGLAEFKS 278 Query: 292 QLEQWRD 298 L + R+ Sbjct: 279 LLVELRE 285 >UniRef50_B8HPI4 Nuclease SbcCD, D subunit n=28 Tax=Cyanobacteria RepID=B8HPI4_CYAP4 Length = 442 Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 83/330 (25%), Positives = 120/330 (36%), Gaps = 59/330 (17%) Query: 1 MRILHTSDWHLGQNFYS---------KSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFD 51 ++ILH SD HLG F +R + L ++ A VD ++ GD F Sbjct: 2 IKILHLSDVHLGSGFSQGRLNPVTGLNTRLEDFVTTLGRCIDRAIEEPVDLVLFGGDAFP 61 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA 111 +PP + + R L V+L GNHD + G A Sbjct: 62 DATPPPMVQEAFARQFRRLADASIPTVLLVGNHDQHSQ-----------------GLGGA 104 Query: 112 PQILPRRDGTPGAVL-------------CPIPFLRPRDIITSQAGLNGIEKQQHLLAAIT 158 + R G PG V+ PI L +T L E + LA + Sbjct: 105 SLCIYRTLGIPGFVVGDRLATHLIQTQHGPIQILT-LPWLTRSTLLTRPETEGLSLAQVN 163 Query: 159 DYYQQHYADACK---LRGDQPLPIIATGHLTT----VGASKSDAVRDIYIGTLDAFPAQN 211 + A A + R D LP + HL GA + AV + L Sbjct: 164 QLLIERLAIALEGEIRRLDPQLPTVLLAHLMADSARYGAERFLAVSKGFTIPLSLLTRPC 223 Query: 212 FPPADYIALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGK------- 264 F DY+ALGH+H+ Q++ V Y GS + F E G+ K LV G+ Sbjct: 224 F---DYVALGHVHKHQVLSTDPPVVYPGSIERVDFGEEGEEKGYVLVEVERGRANFQFCP 280 Query: 265 --LESVENLNVPVTQPMAVLKGDLASITAQ 292 + LNV V++ + LA+I A+ Sbjct: 281 LPVRQFRTLNVDVSEHCDPQQALLAAIQAE 310 >UniRef50_Q96YR6 DNA double-strand break repair protein mre11 n=11 Tax=Sulfolobus RepID=MRE11_SULTO Length = 387 Score = 61.2 bits (147), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 40/135 (29%), Positives = 60/135 (44%), Gaps = 18/135 (13%) Query: 2 RILHTSDWHLGQNFYS-KSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 +ILH SD HLG+ Y+ RE + L++ A VD II GD+FD PP+ A Sbjct: 5 QILHISDTHLGKRQYNLDFREQDVYDTFSQLIDIAIKEHVDGIIHTGDLFDINDPPNKAE 64 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLN--------ESRDIMAFLNT---------T 103 + R + L++ G +V+AG+HDS E D++ FL+ Sbjct: 65 IVAIRELKRLKEAGIPFIVIAGDHDSPKKFTAIYPQKILEEFDLIKFLSKPDTPYKLGEI 124 Query: 104 VVASAGHAPQILPRR 118 + H P + R Sbjct: 125 TIYGISHVPNVAKER 139 >UniRef50_B7IH42 Exonuclease sbcd n=1 Tax=Thermosipho africanus TCF52B RepID=B7IH42_THEAB Length = 385 Score = 61.2 bits (147), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 14/103 (13%) Query: 1 MRILHTSDWHL------GQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTG- 53 M+ILHTSDWHL G YS R ++ ++++ A ++VD +I++GD+FD Sbjct: 1 MKILHTSDWHLDRRPAGGVGLYSNERYEDYFKAAEYIVNEAVKNKVDLVIISGDLFDKND 60 Query: 54 -SPPSYARTLYN--RFVVNLQQTGCHLVVLAGNHDSVATLNES 93 SP TLY + + L++ ++ + GNHD V++ ES Sbjct: 61 ISP----ETLYKAEKLLNVLKENEIKVLAIEGNHDQVSSYKES 99 >UniRef50_Q4JUH5 Putative uncharacterized protein n=2 Tax=Corynebacterium jeikeium RepID=Q4JUH5_CORJK Length = 422 Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 38/93 (40%), Positives = 52/93 (55%), Gaps = 13/93 (13%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQ------AFLDWLLETAQTHQVDAIIVAGDVFDTG- 53 +RILHTSDW LG S EA+ + A ++ LLE A+ Q DAI+VAGDVFD Sbjct: 13 VRILHTSDWQLGMKRRFLSSEAQSRFDESRLAAVEVLLELAEEKQCDAIVVAGDVFDDNL 72 Query: 54 -SPPSYARTLYNRFVVNLQQTGCHLVVLAGNHD 85 P +Y R + L+++ + +L GNHD Sbjct: 73 LKP-----EIYGRAMDVLKRSTVPVFLLPGNHD 100 >UniRef50_Q0IAY7 DNA repair exonuclease n=1 Tax=Synechococcus sp. CC9311 RepID=Q0IAY7_SYNS3 Length = 394 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 62/259 (23%), Positives = 107/259 (41%), Gaps = 54/259 (20%) Query: 2 RILHTSDWHLGQNFY------SKSR-EAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGS 54 R LHT+DW +G+ ++ ++R + E + + A +DA++VAGD+FD+ Sbjct: 3 RFLHTADWQIGKPYHWIEDPQKRARVQQERVNAVSRIAAIASEQNLDAVMVAGDLFDSS- 61 Query: 55 PPSYARTLYNRFVVNLQQTGCHLVVLAGNHD--SVATLNESRDIMAFL-----NTTVVAS 107 + + L + + C ++V+ GNHD + + +D+ + N ++ Sbjct: 62 --TVSPALVMEVMEAIASIPCPVLVIPGNHDHGGAGGIWQRQDVQRQMRERCPNLELLLQ 119 Query: 108 AGHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYAD 167 PQ++ G V+ P P LR RD + L + + Sbjct: 120 T--EPQVI------AGMVVLPCPLLRQRDSRSPADWLESL-------------------N 152 Query: 168 ACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQ 227 L +QP ++A G + GA + V ++ D +P Q DYIALG H Sbjct: 153 WSSLPQNQPRVVLAHGSVQGFGAEEQ--VNQLH---HDRWPEQEL---DYIALGDWHALT 204 Query: 228 IIGGMEHVRYCGSPIPLSF 246 + YCG+P P F Sbjct: 205 QLN--PRAWYCGTPEPDRF 221 >UniRef50_C6P7X1 Nuclease SbcCD, D subunit n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6P7X1_CLOTS Length = 406 Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 67/286 (23%), Positives = 118/286 (41%), Gaps = 50/286 (17%) Query: 1 MRILHTSDWHLG-QNFYSKSREA-----------EHQAFLDWLLETAQTHQVDAIIVAGD 48 + I HT+D H+G +N+ + +++ F+D+ +E D +++GD Sbjct: 2 INIAHTADIHIGIENYGTINKKTGLNTRLEDFLNAFDKFVDYSIENC-----DIAVISGD 56 Query: 49 VFDTGSP-PSYARTLYNRFVVNLQQTGCHL--VVLAGNHDSVATLNESR--DIMAFLNTT 103 ++ + P P+ R L R +++ H+ V+ GNHD + +++R DI L+ Sbjct: 57 MYKSREPNPTQQRELAKR----IKRLSQHIPVVINNGNHDQPNSDSKARAFDIYKILDVD 112 Query: 104 VVASAGHAPQILPRRDGTPGAVLC----PIPFL----RPRDIITSQAGLNGIEKQQHLLA 155 V A L + P + C P FL +++ +EK +L Sbjct: 113 NVYVANKPDVFLIKTKNGPIQIACLPYFPKSFLLKLEESKNLSIDDINKKMVEKINTILD 172 Query: 156 AITDYYQQHYADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFP-- 213 +T + D +P I + HL+ GA S + + I IG P Sbjct: 173 ILTS------------KLDSSIPSILSAHLSVTGAVTS-SEKSIMIGDDVVVPISVIARH 219 Query: 214 PADYIALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSK-YVHLV 258 Y+ALGHIH+ Q++ Y GS + F E K + H++ Sbjct: 220 QYKYVALGHIHKYQVVWDTPLTVYSGSIEKIDFGEERDEKGFCHVI 265 >UniRef50_D1B7B2 Metallophosphoesterase n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B7B2_THEAS Length = 361 Score = 58.2 bits (139), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 75/279 (26%), Positives = 104/279 (37%), Gaps = 54/279 (19%) Query: 1 MRILHTSDWHLGQNFYSKSREAE-----HQAFLDWLLETAQTHQVDAIIVAGDVFDTGSP 55 +R +HT+DW +G AE + +LE A+ D ++VAGDVF+ Sbjct: 2 VRFIHTADWQVGMRAVQVGSAAETVRRERLEAVRRILEVARKRCADFLLVAGDVFEDN-- 59 Query: 56 PSYARTLYNRFVVNLQQTGCHLVVLAGNHDSV--ATLNESRDIMAFLNTTVVASAGHAPQ 113 R L R + L ++ C + +L GNHD + + + R + N TV+ A Sbjct: 60 -RVDRVLVQRLLDLLSRSPCPVYLLPGNHDPLVPGAVWDHRGFASPGNVTVLRRAAPV-- 116 Query: 114 ILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRG 173 PG VL P P + S+ E Q I R Sbjct: 117 ------AAPGCVLYPCP-------VASK------ESNQDPTGWIP-------------RE 144 Query: 174 DQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRA---QIIG 230 LP I H + G + S I DA DY+ALGH H Q Sbjct: 145 GAGLPRIGVAHGSVEGPNVSPWDHPI---PRDAAERCGL---DYLALGHWHSTGTFQDRT 198 Query: 231 GMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVE 269 G + Y G+P P SF E S V LV G S++ Sbjct: 199 GAVRMAYSGTPEPTSFGE-RDSGNVLLVEVEAGSPPSIQ 236 >UniRef50_A8HRM4 Exonuclease n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8HRM4_AZOC5 Length = 373 Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 75/283 (26%), Positives = 109/283 (38%), Gaps = 53/283 (18%) Query: 1 MRILHTSDWHLGQNFYS---KSREAEHQAFLDW---LLETAQTHQVDAIIVAGDVFDTGS 54 MR++H++DW LG+ F +R A +A LD L A+ H+ ++VAGDVFD+ Sbjct: 1 MRLIHSADWQLGKPFGRMPVDARAALSEARLDAIDTLAAAARQHRAGHVLVAGDVFDSAE 60 Query: 55 PPSYARTLYNRFVVNLQ-QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ 113 P +Y + + ++ G +L GNHD + + A V A AP Sbjct: 61 P---GDRIYRQALARMKAAAGVRWWLLPGNHDPLRPDGLWSRLSAEAPENVAACLTPAPV 117 Query: 114 ILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRG 173 +L AVL P P + A +G E A + H A G Sbjct: 118 ML-----GEDAVLLPAPLTHKFSLSDPTAWFDGAETP----AGLPRIGLAHGA-IRTFGG 167 Query: 174 DQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGME 233 D+ +IA G S Y+ALG H + I G Sbjct: 168 DEQTNLIAPDRARRAGLS-------------------------YLALGDWHGLRKIDG-- 200 Query: 234 HVRYCGSPIPLSFDECGK--SKYVHLVTFSNGKLE-SVENLNV 273 H Y G+P P D+ G+ + LV + LE VE L + Sbjct: 201 HTYYSGTPEP---DDFGREATGLALLVDVAGAGLEPQVEALPI 240 >UniRef50_Q110K3 Nuclease SbcCD, D subunit n=3 Tax=Cyanobacteria RepID=Q110K3_TRIEI Length = 427 Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 68/298 (22%), Positives = 111/298 (37%), Gaps = 58/298 (19%) Query: 1 MRILHTSDWHLGQNFYS---------KSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFD 51 ++I+H SD H+G F +R + + L ++ A + VD ++ GD F Sbjct: 2 IKIIHLSDIHIGSGFSHGRINPETGLNTRLEDFISSLKLCIDKAISEPVDLVLFGGDAFP 61 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA 111 +P Y + + + L +V+L GNHD + G A Sbjct: 62 DATPAPYIKQAFAGEIRRLVDAQIPIVLLVGNHDQHS-----------------QGQGGA 104 Query: 112 PQILPRRDGTPGAV------------------LCPIPFLRPRDIITSQAGLNGIEKQQHL 153 + R G PG V + +P+L ++T E + Sbjct: 105 SLGIYRTLGIPGVVVGDRLETHKIQTQNGYIQIITLPWLTASSLMTKS------ETEGKS 158 Query: 154 LAAITDYYQQ--HYADACKLRGDQP-LPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQ 210 + + + Q ++R P +P + GHL AS A R + +G P Sbjct: 159 MGQVNESLIQKLRLILESEIRKLNPEIPTVLLGHLMADRASLG-AERFLAVGKGFNIPVS 217 Query: 211 --NFPPADYIALGHIHRAQIIGGMEH--VRYCGSPIPLSFDECGKSKYVHLVTFSNGK 264 N P DY+ALGH+H+ Q + + + Y GS + F E + K LV GK Sbjct: 218 LLNHPYFDYVALGHVHKHQNLNNSNNPPIIYPGSIERVDFSEEKEEKGFVLVELEKGK 275 >UniRef50_A8A960 Metallophosphoesterase n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8A960_IGNH4 Length = 384 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 33/89 (37%), Positives = 54/89 (60%), Gaps = 5/89 (5%) Query: 1 MRILHTSDWHLGQNFYS-KSREAE-HQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSY 58 M I+H +D HLG+ Y K RE + ++AF D L+E + DA+++AGD+FDT P S Sbjct: 1 MLIVHAADVHLGKRQYGLKEREEDFYKAFED-LVEATIREKADALVIAGDLFDTPVPDST 59 Query: 59 AR--TLYNRFVVNLQQTGCHLVVLAGNHD 85 + + V L++ G ++++AG+HD Sbjct: 60 MKPFKVAVEGVRRLRENGIEVIMVAGDHD 88 >UniRef50_A3X5K0 Exonuclease SbcD n=4 Tax=Rhodobacteraceae RepID=A3X5K0_9RHOB Length = 381 Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 72/263 (27%), Positives = 101/263 (38%), Gaps = 52/263 (19%) Query: 1 MRILHTSDWHLGQNFYSKSREAE------HQAFLDWLLETAQTHQVDAIIVAGDVFDTGS 54 R LH+SD HLG+ F E Q + L AQ H+ +++AGD+FDT + Sbjct: 4 FRFLHSSDLHLGKRFGQMPEEVRADLQQARQQVVSTLAGLAQEHEAKHVLIAGDMFDTET 63 Query: 55 PPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVA--TLNESRDIMAFLNTTVVASAGHAP 112 P + R L TG ++ GNHDS A TL A NT ++ P Sbjct: 64 PST--RVLRQALAAMGAVTGLQWWIIPGNHDSAAAETLWAEMGDHASENTHLLMQ----P 117 Query: 113 QILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAA--ITDYYQQHYADACK 170 + + + PG L P P +H A +T + + A Sbjct: 118 EPV---EMAPGVHLLPAPC-------------------RHRFAGEDLTRWMDGYETPAGD 155 Query: 171 LRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIG 230 LR +A G + G SDA I A A+ DY+ALG H A + Sbjct: 156 LRIG-----LAHGGVLDFG---SDASGGEVISPNRASSAR----LDYLALGDWHGAFTLN 203 Query: 231 GMEHVRYCGSPIPLSFDECGKSK 253 E RY G+P F G+ + Sbjct: 204 --ERSRYSGTPEADRFKHAGRGQ 224 >UniRef50_A8EU07 Putative uncharacterized protein n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EU07_ARCB4 Length = 96 Score = 55.5 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 26/52 (50%), Positives = 33/52 (63%), Gaps = 4/52 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDA----IIVAGD 48 M++LH SDWHLGQNF +SR EH+AFL LLE + V+ +I GD Sbjct: 1 MKLLHKSDWHLGQNFMGRSRVDEHEAFLFSLLEILKEKHVEVLNVHVITTGD 52 >UniRef50_Q041R3 DNA repair exonuclease n=28 Tax=Lactobacillus RepID=Q041R3_LACGA Length = 407 Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 70/302 (23%), Positives = 119/302 (39%), Gaps = 58/302 (19%) Query: 1 MRILHTSDWHLGQNF----------YSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVF 50 M+ +H +D HL F ++ +++ ++F+ ++TA +VD +++AGD F Sbjct: 1 MKFMHLADAHLDSPFQGLSFLPSNEFNNIKQSTQKSFIK-AIDTALDQKVDLVLIAGDTF 59 Query: 51 DTGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGH 110 D+ P ++ ++R V L +V++ GNHD LN I+ Sbjct: 60 DSVHPSPQSQLFFSREVKRLTDQEIQVVMILGNHD---YLNPDEMIL------------- 103 Query: 111 APQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACK 170 PQ + P + + F D + AG + YQ ++ + K Sbjct: 104 -PQTPYFKLLGPDEQVETVEFKTKSDFPYTVAGFS---------------YQHNHIEVDK 147 Query: 171 L-----RGDQPLPIIATGHLTTVGASKSDAVRDIYIG-TLDAFPAQNFPPADYIALGHIH 224 + +GD T L GA + A +++Y T N+ +Y ALGHIH Sbjct: 148 ISEFPNKGDN-----FTFGLMHAGAKTTAAYQNVYAPFTTAEIKDLNY---NYFALGHIH 199 Query: 225 RAQIIGGMEHVRYCGSPIPLSFDECG-KSKYVHLVTFSNGKLESVENLNVPVTQPMAVLK 283 Q + + Y G+ +E G K YV V S ++ P+ MA L Sbjct: 200 LRQTLSDKPPIVYSGNLQGRHINEQGAKGVYVGTVDESTKEISLNFVETAPIIWQMATLN 259 Query: 284 GD 285 D Sbjct: 260 LD 261 >UniRef50_UPI0001C419A3 DNA double-strand break repair protein Mre11 n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C419A3 Length = 463 Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 69/274 (25%), Positives = 110/274 (40%), Gaps = 72/274 (26%) Query: 1 MRILHTSDWHLG-QNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYA 59 MR H SD HLG + F RE + + ++ VD +I +GD+FD+ P + A Sbjct: 1 MRFAHISDSHLGCRQFGLLEREKDFYEVFNRTIDKIIEEDVDFVIHSGDLFDSNRPSTEA 60 Query: 60 RTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 + + ++ L + + +AGNHDS+ + PQ+L + Sbjct: 61 LLTFQQALLRLNEAKIPVYAIAGNHDSI-----------------LRKGSLPPQVLFKDI 103 Query: 120 G----TP-------GAVL-CPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYAD 167 G +P GAVL C +PF + + N + + ++L+ + Sbjct: 104 GLNIISPEHPVHQLGAVLICGVPF-------ATSSQKNALVENYNILSKV---------- 146 Query: 168 ACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIH--- 224 D + I H G SK D Y LD P +NF DY A+GH+H Sbjct: 147 -----ADTAVKSILVSHQ---GISKW-MPEDSYEIDLDDLP-KNF---DYYAMGHLHNFY 193 Query: 225 -----RAQII--GGMEHVRYCGSPIPLSFDECGK 251 + +++ G ME R S + +F E GK Sbjct: 194 VEDYGKGKLVYPGSMEINR--TSELNDNFKEFGK 225 >UniRef50_D2EG17 Metallophosphoesterase n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EG17_9EURY Length = 392 Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 33/142 (23%), Positives = 64/142 (45%), Gaps = 9/142 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ +H D H+GQ + + +R + + ++ A ++D I+ +GD+FD+G+PP + Sbjct: 1 MKFIHVGDTHIGQVYKNDTRNNDIKEAFTQMINYAVAEKIDFIVHSGDLFDSGNPPLDSL 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHD-------SVATLNESRDIMAFLNTTVVASAGHAPQ 113 + L+ G L V+ G+HD S+ L ++ LN+ G Sbjct: 61 LFVTDELNRLKTAGISLFVIPGSHDVGIGEEESIIELFHRNKLLINLNSKKYIKFGENVN 120 Query: 114 ILPRRDGTPGAVLCPIPFLRPR 135 + + + A +C I R + Sbjct: 121 L--KGEVYKNAFICGIKGKRSK 140 >UniRef50_C5RCI7 DNA repair exonuclease n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RCI7_WEIPA Length = 397 Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 82/323 (25%), Positives = 123/323 (38%), Gaps = 85/323 (26%) Query: 1 MRILHTSDWHLGQNFYSKSR---------EAEHQAFLDWLLETAQTHQVDAIIVAGDVFD 51 M+ +H D HLG F S +A + + L++ A T VD +++AGD+FD Sbjct: 1 MKFIHAGDLHLGNPFGGLSMTPDWLTDQLQAATETAVHRLVDDAITAAVDFVVLAGDLFD 60 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA 111 T +P + A+ R + L + V GNHD V L+ R N T Sbjct: 61 TTTPDARAQLDLVRELERLATENIPVYVGFGNHDYV--LDWQRVPTFPKNVT-------- 110 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAIT--DYYQQHYADAC 169 L P+D+ T ++ + H AI+ Y Q+H Sbjct: 111 --------------------LFPKDVTTYH-----MQTKNHESVAISGFSYTQRH----- 140 Query: 170 KLRGDQ--PLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPP----------ADY 217 + DQ PI +T + D IY G++ + N+ P DY Sbjct: 141 -ITTDQVAEFPIKST---------QDDWHIGIYHGSMGEVGSGNYAPFNLQAMQQKHYDY 190 Query: 218 IALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQ 277 ALGHIH + + + Y GS L E G Y +ES N VP Sbjct: 191 WALGHIHVRETLQKKPFIGYSGSIQGLDKTETGAKGYY--------MVESEGNELVPTFT 242 Query: 278 PMAVLKGDLASITAQLEQWRDVS 300 P+A + +TA++ RD+S Sbjct: 243 PVA----PITWVTAEVRTERDLS 261 >UniRef50_Q2NFC6 DNA double-strand break repair protein Mre11 n=1 Tax=Methanosphaera stadtmanae DSM 3091 RepID=Q2NFC6_METST Length = 393 Score = 54.3 bits (129), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 78/329 (23%), Positives = 128/329 (38%), Gaps = 62/329 (18%) Query: 1 MRILHTSDWHLGQNFYS-KSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYA 59 ++I H +D HLG Y RE + + +++ + VD ++ AGD+F+ PP A Sbjct: 3 IKIAHMADTHLGYKQYGLNERENDFYKTFEKIIDDIISKDVDYVLHAGDLFEHPKPPIKA 62 Query: 60 RTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 + + L + + V+AGNHDS+ N S PQ L + + Sbjct: 63 LLVAQKGFEKLLENNIPIFVIAGNHDSIQRKNTS-----------------IPQELYKNE 105 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 F DI L G+E + + + +A K R Sbjct: 106 NFHIINHKNYNFTLDEDIF-----LVGLEYFNRSYEGVEPFLKNTLDEAKKHR------- 153 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPA-DYIALGHIH---RAQIIGGMEHV 235 L + S S Y F + P DY A+GH+H + GG+ + Sbjct: 154 ---IKLLMLHGSVSK-----YFDFEPEFELKTIPEGYDYYAMGHLHGRINDKFKGGI--L 203 Query: 236 RYCG-------SPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAV------- 281 Y G S IP ++ + GK +LVT + VE +N+P+ + + Sbjct: 204 SYPGSTEIRTKSEIP-NYQKNGKG--YNLVTIGDDNKIDVEFINIPLERKFIIKSIEYPK 260 Query: 282 LKGDLASITAQLEQWRDVSQEPPVWLDIE 310 L L ++ +LE D S++P V+L I+ Sbjct: 261 LDETLNKLSEKLESM-DSSKKPVVYLTIK 288 >UniRef50_Q8TXI3 DNA double-strand break repair protein mre11 n=1 Tax=Methanopyrus kandleri RepID=MRE11_METKA Length = 451 Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 1/86 (1%) Query: 1 MRILHTSDWHLGQNFYS-KSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYA 59 MR+ H +D HLG + +SRE + L+E + VD +++AGD+F+ P + A Sbjct: 1 MRMAHVADVHLGHALMNLRSREEAVMETFERLMEEVRECSVDVLVIAGDLFEHARPKTEA 60 Query: 60 RTLYNRFVVNLQQTGCHLVVLAGNHD 85 L + L++ G +V AGNH+ Sbjct: 61 LYLAVEKLSELKEDGVEIVATAGNHE 86 >UniRef50_C0QDX0 DNA repair exonuclease family protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QDX0_DESAH Length = 419 Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 91/391 (23%), Positives = 165/391 (42%), Gaps = 68/391 (17%) Query: 1 MRILHTSDWHL-----GQNFYSKS-----REAEHQAFLDWLLETAQTHQVDAIIVAGDVF 50 ++ +HT+D HL G + + R A +AF D L++ A +VD I++AGD++ Sbjct: 2 VKFIHTADIHLDSPLKGLEVHDDAPVEEIRGATRRAF-DNLIDLALEEEVDFILIAGDLY 60 Query: 51 DTGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGH 110 D ++ + L ++G + +++GNHD+ + L ++ M + + S Sbjct: 61 DGDWKDYNTGLFFSARMGKLSKSGIKVFIVSGNHDAASQLTKT---MPLPDNVTLFS--- 114 Query: 111 APQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACK 170 PR +P+ + G+ I Q + A+T+ Y Sbjct: 115 -----PR---------------KPQSVKLDDIGVI-IHGQSYSHRAVTENLASQYP---- 149 Query: 171 LRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIG 230 + D I H + G + D T+D ++ + DY ALGH+H +II Sbjct: 150 -QYDSNYFNIGLLHTSLTG---REGHEDYAPCTMDDLKSKGY---DYWALGHVHTREIIS 202 Query: 231 GMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASIT 290 + + G+ E G +K LV+ +G++ VE + V + AV + DL+ Sbjct: 203 EDPWIVFPGNIQGRHIKETG-AKGASLVSVEDGRIVKVEAFELDVLR-WAVCQVDLSECE 260 Query: 291 AQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQA----LTESLPVEVLLVRRSREQRE 346 E+ DV ++ ++ L + K A LT S PV L+ ++ + E Sbjct: 261 T-CEKIYDVVRQ---------ALEQALDQVDGKPLAIRLILTGSCPVHGKLLDQTTQWTE 310 Query: 347 --RVLASQQRETLSELSVEEVFNRRLALEEL 375 R +A Q E E +V+ R+++LEE+ Sbjct: 311 GFRSIAVQSGEMWLE-TVKFQTTRKVSLEEM 340 >UniRef50_C0GDI6 Metallophosphoesterase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GDI6_9FIRM Length = 372 Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 15/99 (15%) Query: 1 MRILHTSDWHLG--QNFYSKSREA---EHQAFLDWLLETA--QTHQVDAIIVAGDVFDTG 53 MRILH +D HLG NF E E FL ++ A + +++ A+++AGD+F+T Sbjct: 1 MRILHLADLHLGWRPNFLGSKNEERGRERDNFLTRAVDFALDKKNEISAVLIAGDLFETH 60 Query: 54 SPPS----YARTLYNRFVVNLQQTGCHLVVLAGNHDSVA 88 PP+ Y + NR V N +LV + GNHD V+ Sbjct: 61 RPPAELLEYVLSQLNRLVEN----NLYLVTVPGNHDEVS 95 >UniRef50_A4J7M8 Metallophosphoesterase n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J7M8_DESRM Length = 453 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 67/296 (22%), Positives = 121/296 (40%), Gaps = 52/296 (17%) Query: 1 MRILHTSDWHLG-QNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGS--PPS 57 ++ +H SD HLG Q K + + L ++++ A +VD ++VAGD++D+ S PP Sbjct: 4 LKFIHCSDIHLGRQRLGGKLPDEDFARALGYIVQVALEQRVDGLLVAGDLYDSPSIQPPI 63 Query: 58 YARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTT------VVASAGHA 111 + + ++ LQ+ + ++ GNHD E+ + +LN + Sbjct: 64 LQQAI--NCLMPLQEANIPIFIIEGNHDRATVTGETHTWVRYLNDIGLVHLLSIPFNAEG 121 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 P + P D +R II + G K+ L++ D +Q Sbjct: 122 PVLTPWDDTAKRGSYIDYKGVR---IIGAGYLGAGTIKRARLISEAMDQWQ--------- 169 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNF----PPADYIALGHIHRAQ 227 +P+P T + + A D + F + DY+ALGHIH+ Sbjct: 170 ---EPVP---TAKIMLLHAGP-----DYMVQEGGGFSKETLEFLHERVDYLALGHIHKP- 217 Query: 228 IIGGMEHVRYC---GSPIPLSFDEC---GKSKYVHLVT---FSNGKLESVENLNVP 274 + H + GSP + +EC G+ + + ++ F+ L+ E L+VP Sbjct: 218 ----LNHDGWAVNPGSPEHVRLEECRYDGQPRGMAVMEIDPFAPHPLQRAEILSVP 269 >UniRef50_C0FS05 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FS05_9FIRM Length = 193 Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 1/60 (1%) Query: 201 IGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTF 260 +G ++ P DY ALGHIHR Q IG +++ RYCG+P+ S E G K V +V Sbjct: 61 VGGIENVDTAVLEPFDYAALGHIHRKQKIGRVQN-RYCGTPLQYSVSEAGDEKTVTMVEL 119 >UniRef50_A7HL21 Metallophosphoesterase n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HL21_FERNB Length = 397 Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 12/95 (12%) Query: 1 MRILHTSDWHLG--------QNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDT 52 M+ILHTSDWHLG +N YS R ++ +++++ A VD I+AGD+FD+ Sbjct: 1 MKILHTSDWHLGKRPVGGIGENSYSDFRYNDYFNAAEYIVDRAIEENVDLFIIAGDLFDS 60 Query: 53 G--SPPSYARTLYNRFVVNLQQTGCHLVVLAGNHD 85 +P RT + L+ + + GNHD Sbjct: 61 NKINPDILERT--EGILKKLKDKDIPVFTVLGNHD 93 >UniRef50_Q67M04 Putative phosphoesterase n=1 Tax=Symbiobacterium thermophilum RepID=Q67M04_SYMTH Length = 373 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 80/298 (26%), Positives = 124/298 (41%), Gaps = 43/298 (14%) Query: 1 MRILHTSDWHLGQN--FYSKSREAEHQAFLDWLLETA------QTHQVDAIIVAGDVFDT 52 MRILH +D HLG F ++ + E + D LL A ++ +++AGD+F+T Sbjct: 1 MRILHLADLHLGWRPAFMAREQAEERRRRRDGLLARAVDLALDPGRRIGLVVIAGDLFET 60 Query: 53 GSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP 112 P + L+Q G +V + GNHD + N Sbjct: 61 HCPEEPLVAAAVAQLRRLEQAGIPVVTVPGNHDEITYPNSVYQR---------------- 104 Query: 113 QILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLR 172 RRDG PG +L P P + T +A G + LA Q A R Sbjct: 105 ----RRDGWPG-LLVTNP--HPAHVATIEA--QGETVHLYSLAYTGGVTQTRPAIRQFPR 155 Query: 173 GDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHR-AQIIGG 231 DQP +A H T+G D R + + DA + DYIALGHIH+ +++ G Sbjct: 156 LDQPGLHVAIFH-GTLGEGLGD--RSLPLDP-DALGRAGY---DYIALGHIHKPSEVRLG 208 Query: 232 MEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASI 289 Y G+ FD+ G ++ + + G + ++E + P Q +AV D++ + Sbjct: 209 RGLAVYPGTVEGKGFDDPGTRQFT-IASVEPGGV-TLERVPDPAAQKVAVHDLDVSPL 264 >UniRef50_A5GT58 DNA repair exonuclease n=1 Tax=Synechococcus sp. RCC307 RepID=A5GT58_SYNR3 Length = 392 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 65/255 (25%), Positives = 104/255 (40%), Gaps = 51/255 (20%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDW--------LLETAQTHQVDAIIVAGDVFDT 52 +R LHT+DW +G+ Y++ + +H+A L + Q Q+D ++VAGD+FD+ Sbjct: 8 VRFLHTADWQIGKP-YARVVDPDHRARLKQVRIAVIQRMALFVQRQQLDFVLVAGDLFDS 66 Query: 53 GSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP 112 +P AR+ + + + Q ++V+ GNHD + + SA AP Sbjct: 67 PAP---ARSEVAQALSAIGQIPAPVLVIPGNHD-----HGGPGSLWHQGWFQELSADVAP 118 Query: 113 --QILPRRDGTP--GAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADA 168 QIL R GAV+ P P +R + + L+ +T D Sbjct: 119 NLQILLERQPVSLCGAVVLPCPLMRQTAV-------------EDPLSWLTQLNTSELPDG 165 Query: 169 CKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPA--DYIALGHIHRA 226 P I H G+ +S A D + + + P DYIALG H Sbjct: 166 ---------PRIVLAH----GSVQSFAALDSQEASSNQLSLEQLPQGLCDYIALGDWHGL 212 Query: 227 QIIGGMEHVRYCGSP 241 + + + YCG P Sbjct: 213 KQVSA--NAWYCGCP 225 >UniRef50_A5UJE8 DNA repair exonuclease (SbcD/Mre11-family), Rad32 n=3 Tax=Methanobrevibacter smithii RepID=A5UJE8_METS3 Length = 407 Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%) Query: 1 MRILHTSDWHLG-QNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYA 59 M+ H +D HLG + F RE + D +++ +VD +I +GD+FD+ P A Sbjct: 1 MKFAHLADTHLGYRQFGLLEREKDFYEVFDKIIDKIIEEKVDFVIHSGDLFDSARPSPSA 60 Query: 60 RTLYNRFVVNLQQTGCHLVVLAGNHDSV 87 + + ++ L+ G + +AGNHD V Sbjct: 61 LLAFQKGLLKLKGAGIPMYAIAGNHDIV 88 >UniRef50_B2A8B5 Metallophosphoesterase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A8B5_NATTJ Length = 402 Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 17/131 (12%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 +RILHT+D HL K+ E L+ L+ Q +D +I+ GD+FD+ A Sbjct: 2 LRILHTADIHL------KTGCDERWRALEELIARGQKEDIDLLIICGDLFDSSQD---AV 52 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 LYN TG +V+L GNHD L+ ++ + F + + P +L D Sbjct: 53 NLYNYLRSLFTNTGYRIVILPGNHD----LDVYQEGLYFGEDVSIIKDVNKPLVLEEHD- 107 Query: 121 TPGAVLCPIPF 131 V+ +PF Sbjct: 108 ---TVIWGLPF 115 >UniRef50_B5IR16 Ser/Thr protein phosphatase family protein n=1 Tax=Thermococcus barophilus MP RepID=B5IR16_9EURY Length = 380 Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 1/87 (1%) Query: 1 MRILHTSDWHLGQNFYS-KSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYA 59 MRI H SD HLG Y+ RE + + ++ +VD +I AGD FDT PP A Sbjct: 1 MRIAHISDTHLGYRQYNLDERENDIYDAFNEAIDIIIEERVDVVIHAGDFFDTPRPPIKA 60 Query: 60 RTLYNRFVVNLQQTGCHLVVLAGNHDS 86 + + L + G ++ + G HD+ Sbjct: 61 LYVAKEAIKRLHENGVKILTVLGEHDT 87 >UniRef50_B6V2S2 Gp21.3 n=1 Tax=Bacillus phage SPO1 RepID=B6V2S2_BPSP1 Length = 364 Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 66/244 (27%), Positives = 102/244 (41%), Gaps = 55/244 (22%) Query: 28 LDWLLETAQTHQVDAIIVAGDVFDT-GSPPSYART-LYNRFVVNLQQTGCHLVVLAGNHD 85 LD + E + I+ AGD+F G + + +Y++F + +G ++ + GNHD Sbjct: 36 LDQIKEHCLDMGITQILFAGDMFHVRGRVDTVVQNRIYDKFK-EICASGIKVLAIPGNHD 94 Query: 86 S-------VATLNESRDIMAFLNTTVVASAGHAPQILPRRDGTPGAVLCPIPFLRPRDII 138 +L+ +DI TV+ + H IL DGTP V C ++ Sbjct: 95 DHNNKDLPEHSLHMFKDIEGM---TVIDTLDHY--ILD--DGTP-VVCCRYS----KNAQ 142 Query: 139 TSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPIIATGHLTTVGA--SKSDAV 196 + +N I+ Q +QPL + HL G KS V Sbjct: 143 MVKDYINSIDPSQF--------------------ENQPLLL---AHLGVSGGLIGKSSYV 179 Query: 197 RDIYIGTLDAFPAQNFPP--ADYIALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKY 254 DAF ++ P YI LGH HR Q +GG +HV Y G+P+ SF + G+ K Sbjct: 180 ------MADAFSVEDLRPDIFKYIILGHFHRRQFLGGYKHVLYTGAPLQHSFSDEGEHKG 233 Query: 255 VHLV 258 ++V Sbjct: 234 FYIV 237 >UniRef50_Q3SU71 Exonuclease SbcD n=5 Tax=Alphaproteobacteria RepID=Q3SU71_NITWN Length = 374 Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 34/94 (36%), Positives = 46/94 (48%), Gaps = 10/94 (10%) Query: 1 MRILHTSDWHLGQNFY-------SKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTG 53 R +H+SD HLG+ F S+ REA H A + L + A+ I++AGDVFDT Sbjct: 2 FRFIHSSDLHLGKRFGNFSGDLPSRLREARH-AVIGRLAQHAREQSAATILLAGDVFDTE 60 Query: 54 SPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSV 87 +P S R V+L GNHDS+ Sbjct: 61 TPASDVR--RQALTEMAHHAPIRWVILPGNHDSL 92 >UniRef50_C4LJP3 Putative uncharacterized protein n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LJP3_CORK4 Length = 415 Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 36/102 (35%), Positives = 50/102 (49%), Gaps = 21/102 (20%) Query: 2 RILHTSDWHLGQN--FYSKSREA-------EHQAF--------LDWLLETAQTHQVDAII 44 RILHTSDW LG F K + + QA + + + A Q DA++ Sbjct: 27 RILHTSDWQLGMERWFLKKDKNTANDDGGLDSQALYTQARFTVIKRMADIAHDRQCDAVV 86 Query: 45 VAGDVFDTGSPPSYARTLYNRFVVNLQQ-TGCHLVVLAGNHD 85 VAGDVFD+ P + NRF+ +++ T +V L GNHD Sbjct: 87 VAGDVFDS---PQVGERIQNRFIEAIERFTPIPIVFLPGNHD 125 >UniRef50_C4ZHC2 DNA repair exonuclease n=3 Tax=Clostridiales RepID=C4ZHC2_EUBR3 Length = 354 Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 67/270 (24%), Positives = 98/270 (36%), Gaps = 70/270 (25%) Query: 1 MRILHTSDWHLGQNFYS-------KSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTG 53 M+I+H +D HL S K R+ E ++E A+ + V AII+AGD+FDT Sbjct: 1 MKIIHCADLHLDSKMTSNLSKEQAKERKMEILRTYSRMIEYARNNDVKAIIIAGDLFDTR 60 Query: 54 SPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDS---VATLNE-SRDIMAFLNTTVVASAG 109 + + AR L + + L GNHDS ++ L+E ++ F N S G Sbjct: 61 NVSATARNLVKDSITS--NPDIDFYYLKGNHDSDNFISKLDEIPENLKLFSNQWTSYSYG 118 Query: 110 HAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADAC 169 + D + AV+ ++ N + L Sbjct: 119 NITITGLEIDKSNQAVM-------YNSLVLDNDNYNVVTLHGQL---------------- 155 Query: 170 KLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQII 229 GD+ I+TG L G DY+ALGH+H Q Sbjct: 156 ---GDE----ISTGDLKNKG-------------------------IDYLALGHVHEYQSG 183 Query: 230 GGMEHVRYC--GSPIPLSFDECGKSKYVHL 257 YC G FDECG+ +V L Sbjct: 184 QLDNRGMYCYSGCLEGRGFDECGQKGFVVL 213 >UniRef50_Q9HLR7 DNA double-strand break repair protein mre11 n=3 Tax=Thermoplasma RepID=MRE11_THEAC Length = 376 Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 79/349 (22%), Positives = 144/349 (41%), Gaps = 69/349 (19%) Query: 4 LHTSDWHLGQNFYSKSREAEHQAFLDWL---LETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 +H SD H+G + S + + Q F D ++ A + VD +I GD+FDT P + A Sbjct: 1 MHFSDTHIG--YRSLTLDEREQDFYDAFHEAIDIALENSVDFVIHTGDLFDTWVPGNRAI 58 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 + V+ L + V+ G+HD PRR+G Sbjct: 59 REFRNAVMKLNARNIPIFVIFGDHDR-----------------------------PRRNG 89 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITD---YYQQHYADACKLRGDQPL 177 P A + + + + + + L+ I++ Y + D K R + Sbjct: 90 EPAAGIFDFMGVHVLGWDAYEYAVRKFDGEDVLIGGISNMKGYMKTRLKDEYK-RSEN-- 146 Query: 178 PIIATGHLTTVGASKSDAVRDIYI-----GTLDAFPAQNFPPADYIALGHIH--RAQIIG 230 I G+ + S A+ ++ +D P NF YIA+GH+H + IG Sbjct: 147 --IEEGYRNRILMSHQ-AIDPFFVPDQCEAKMDDLP-MNFS---YIAMGHLHDFMERRIG 199 Query: 231 GMEHVRYCGSPIPLSFDECG----KSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGD- 285 + + Y GS S +E + K V++V SNG+++ ++ + + +P ++ D Sbjct: 200 PL--ISYAGSTEIKSENEINGYLKQGKGVNIVDISNGEVD-LQRIRLKSVRPQIRVESDA 256 Query: 286 ---LASITAQLEQWR--DVSQEPPVWLDI--EITTDEYLHDIQRKIQAL 327 + I+ +L R D ++P V L+I +I+ + + DI + A+ Sbjct: 257 DNYVHEISEKLSSLRVKDNEKKPLVGLEIHGDISMETVMQDISKFDNAI 305 >UniRef50_C6JPT8 Nuclease sbcCD subunit D n=2 Tax=Fusobacterium RepID=C6JPT8_FUSVA Length = 393 Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 29/108 (26%), Positives = 54/108 (50%), Gaps = 11/108 (10%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQT------HQVDAIIVAGDVFDTG- 53 M+ILH SD HLG+ + ++E + +LD+ Q +VD ++ GD+FD Sbjct: 1 MKILHCSDIHLGKKPFG-TKEFSQKRYLDFFYAFEQAADRGIEKKVDIFLITGDLFDKKE 59 Query: 54 -SPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFL 100 SP + R + + L+ +++ GNHD+++ +E + +L Sbjct: 60 LSPDTLDRC--EKVFLKLKNNNIQALLIEGNHDNISGYDEINSWLGYL 105 >UniRef50_B8J071 Metallophosphoesterase n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J071_DESDA Length = 436 Score = 50.8 bits (120), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 63/270 (23%), Positives = 105/270 (38%), Gaps = 63/270 (23%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETA------------QTHQVDAIIVAGD 48 +R +H +D HL F SREA L LL A +T + D +++AGD Sbjct: 4 VRYIHAADLHLDTPFRGLSREAAQGGHLAQLLHDATFKALERLFRLCETEKPDFLVLAGD 63 Query: 49 VFDTGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASA 108 +++ A+ + L G + + GNHD + ++ ES I N T+ Sbjct: 64 IYNEEDHSVKAQLRLRDGCLRLNAAGVRVFIAHGNHDPLNSMLES--IRWPDNVTIF--- 118 Query: 109 GHAPQI---LPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHY 165 P++ + ++G P AV+ I R R+ G N + +++ Sbjct: 119 --GPEVERHIVEKNGVPLAVVHGISHSRARE------GRN-----------LARLFRRDA 159 Query: 166 ADACKLRGDQPLPIIATGHLTTVGASKSD-----AVRDIYIGTLDAFPAQNFPPADYIAL 220 C I H T G +K+D ++ D+ LDA+ AL Sbjct: 160 THNCFQ--------IGVLHCTVEGENKADRYAPCSLDDLKNTGLDAW-----------AL 200 Query: 221 GHIHRAQIIGGMEHVRYCGSPIPLSFDECG 250 GH+H + + + YCG+ L +E G Sbjct: 201 GHVHERRTLSHEPFIAYCGNSQGLHINETG 230 >UniRef50_Q5FS56 Putative exonuclease n=1 Tax=Gluconobacter oxydans RepID=Q5FS56_GLUOX Length = 412 Score = 50.8 bits (120), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 11/96 (11%) Query: 1 MRILHTSDWHL-----GQNFYSKSREAEHQA----FLDWLLETAQTHQVDAIIVAGDVFD 51 R LH +D HL G + Y EAE + LD ++ETA T +VD +++AGD++D Sbjct: 4 FRFLHAADIHLDSPLRGLSRYEGLPEAEIRGSTRRALDRMVETALTEKVDFVVLAGDLYD 63 Query: 52 TGSPPSYARTLYN-RFVVNLQQTGCHLVVLAGNHDS 86 G+ LY R + L Q G +V L+GNHD+ Sbjct: 64 -GTWQDVGTGLYMVRALSRLVQVGIRVVTLSGNHDA 98 >UniRef50_B3T3D7 Putative calcineurin-like phosphoesterase n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW97M7 RepID=B3T3D7_9ARCH Length = 378 Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 41/85 (48%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ H SD HLGQ K RE + +E + +VD +I +GD+FD PP+ A Sbjct: 1 MKFSHISDTHLGQYRSKKEREDDTYNAFKQAIEISIKDKVDFVIFSGDIFDKAQPPNDAI 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHD 85 + L++ G + G+HD Sbjct: 61 LHMMEQLNRLKENGIESYFVLGDHD 85 >UniRef50_A5VH45 Metallophosphoesterase n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VH45_SPHWW Length = 378 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 11/92 (11%) Query: 1 MRILHTSDWHLGQNF-------YSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTG 53 MR++HT+DW LG+ F + +A +A +D + + A + ++VAGDVFDT Sbjct: 10 MRLIHTADWQLGKPFGRFEPDVRAALTDARFEA-IDAIGKAAAENVAGHVLVAGDVFDTE 68 Query: 54 SPPSYARTLYNRFVVNLQQTGCHLVVLAGNHD 85 P RT+ + V + + GC +L GNHD Sbjct: 69 GPED--RTIV-QAVSRMARHGCRWWLLPGNHD 97 >UniRef50_P62132 DNA double-strand break repair protein mre11 n=1 Tax=Nanoarchaeum equitans RepID=MRE11_NANEQ Length = 361 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 3/95 (3%) Query: 3 ILHTSDWHLGQNFYSKSREAEHQAF--LDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 I SD HLG N Y+ +E E ++ L + E +Q D ++V GD+FD Sbjct: 2 IAFISDLHLG-NIYANKKETEEHSYNALAKIEEKLLEYQPDLVLVGGDIFDKNKVSGKEI 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRD 95 ++ F+ + + +V ++GNHD L ES D Sbjct: 61 GVFIDFINKMNKNNIGVVSISGNHDGKYWLKESFD 95 >UniRef50_C6IVB9 Metallophosphoesterase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IVB9_9BACL Length = 441 Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 71/283 (25%), Positives = 101/283 (35%), Gaps = 58/283 (20%) Query: 1 MRILHTSDWHLGQNFYSKS----------REAEHQAFLDWLLETAQTHQVDAIIVAGDVF 50 R LH +D HL F S RE+ AF + L+ A VD ++++GD++ Sbjct: 6 FRFLHAADLHLDTPFSGMSGVPDRLRELLRESTFTAF-ERLIRLAIEEAVDFVVISGDIY 64 Query: 51 DTGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGH 110 D A+ L + G + ++ GNHD ++ R + L V Sbjct: 65 DASDSSLRAQLRLREGWDKLGEHGIPVYLIRGNHDPLS----GRRLRLALPDHVTEFGPK 120 Query: 111 APQILP--RRDGTPGAVLC----PIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQH 164 A ++ R DG P AVL P P + I + LL D + H Sbjct: 121 AESVIAVRRSDGEPVAVLTGASYPTPAVHENLAIQYRREPGSALYHIGLLHGNVDGQEGH 180 Query: 165 YADA-CKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHI 223 A A C LR Q A+G+ DY ALGHI Sbjct: 181 DAYAPCSLRDLQ-----ASGY-------------------------------DYWALGHI 204 Query: 224 HRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLE 266 H+ QI+ V Y G+ S E G + NG+ E Sbjct: 205 HKRQILCDSPWVVYPGNIQGRSLKETGPKGCYLVEVAENGEAE 247 >UniRef50_Q46FJ9 DNA repair protein n=1 Tax=Methanosarcina barkeri str. Fusaro RepID=Q46FJ9_METBF Length = 776 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 1/87 (1%) Query: 1 MRILHTSDWHLG-QNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYA 59 +RILHT+D HLG + ++S+ R + A + ++ A QVDA++ AGD+FD+ +P Sbjct: 5 IRILHTADTHLGYRQYHSEVRRNDFFAAFELVVNDAVEMQVDAVVHAGDLFDSRNPTLED 64 Query: 60 RTLYNRFVVNLQQTGCHLVVLAGNHDS 86 + L+ + + GNH+S Sbjct: 65 LLETINLLSRLKAADIPFLGIVGNHES 91 >UniRef50_A4YET4 Metallophosphoesterase n=1 Tax=Metallosphaera sedula DSM 5348 RepID=A4YET4_METS5 Length = 379 Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 1/91 (1%) Query: 3 ILHTSDWHLGQNFYSK-SREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYART 61 ILH SD HLG Y++ SRE + L++ A V AI+ +GD+FD P + + Sbjct: 2 ILHISDTHLGSRRYNRDSREQDVYDVFSQLIDLAIREHVRAIVHSGDLFDVYKPGNKSLK 61 Query: 62 LYNRFVVNLQQTGCHLVVLAGNHDSVATLNE 92 + V L+ G + + G+HD+ +E Sbjct: 62 FFVDKVKLLRDKGIDFINIPGDHDTPKVRDE 92 >UniRef50_A7VGQ3 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A7VGQ3_9CLOT Length = 365 Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 65/261 (24%), Positives = 104/261 (39%), Gaps = 51/261 (19%) Query: 1 MRILHTSDWHLG-----QNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSP 55 MR +H +D HLG +SK R E ++ D LL A+ +V+ +++AGD+F +P Sbjct: 16 MRFIHIADVHLGAVPDKDKSWSKERADEIESTFDRLLTVAEERKVELLLIAGDLFH--AP 73 Query: 56 PSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQIL 115 PS + ++ + T V++AGNHD + + + F + TV+ A Sbjct: 74 PSLQELKSLDYKLS-KLTNTRTVMIAGNHDYIGKGSPAES-YEFTSNTVLMPA------- 124 Query: 116 PRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQ 175 D A L I ++ + +E Y + YAD D Sbjct: 125 ---DTFSNAYLDDI------NVCVTGFSFGQVE-----------YTEDVYADIMPQMKDA 164 Query: 176 PLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHV 235 ++A G G K + F DY ALGHIH+ + I + Sbjct: 165 INILLAHG-----GDEKHIPIN---------FRRMAEAGFDYCALGHIHKPKHI-VKNKM 209 Query: 236 RYCGSPIPLSFDECGKSKYVH 256 Y GS PL E G+ +++ Sbjct: 210 AYPGSLEPLDRTETGRHGFIY 230 >UniRef50_Q39WB4 Metallophosphoesterase n=2 Tax=Geobacter RepID=Q39WB4_GEOMG Length = 376 Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 5/94 (5%) Query: 1 MRILHTSDWHLG---QNFYSKSREAEHQAF--LDWLLETAQTHQVDAIIVAGDVFDTGSP 55 +RILHT+D HLG +NF +RE D ++ A +VD ++VAGD+FD Sbjct: 3 IRILHTADLHLGSSLKNFGELARERRRDFLKTFDRIVNLAIKREVDCLLVAGDLFDATQV 62 Query: 56 PSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVAT 89 + L G +V++ G HD+V + Sbjct: 63 DAETVGRVQDGFERLSGRGISVVLIPGTHDNVVS 96 >UniRef50_B1VFW1 Putative uncharacterized protein n=1 Tax=Corynebacterium urealyticum DSM 7109 RepID=B1VFW1_CORU7 Length = 422 Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 17/95 (17%) Query: 1 MRILHTSDWHLG----------QNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVF 50 +R LHTSDW +G Q + ++R A ++ L A Q +AI+VAGDVF Sbjct: 23 VRFLHTSDWQIGMGRRFLGEDNQRLFDEAR----LAAVEKLFAVADDRQCEAIVVAGDVF 78 Query: 51 DTGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHD 85 D A + R + L+ + +L GNHD Sbjct: 79 DDN---LLAEKTWTRILDVLRNAPVPIYLLPGNHD 110 >UniRef50_A8MDQ3 Metallophosphoesterase n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MDQ3_CALMQ Length = 405 Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 9/93 (9%) Query: 1 MRILHTSDWHLGQNFY---SKSREAEHQAFLDWLLETAQTHQ---VDAIIVAGDVFDTGS 54 M I H SD HLG+ Y +++R+ E AFL+ + E + + VD ++V GD+FD Sbjct: 1 MLIAHISDVHLGRRQYGLEARARDYE-AAFLNAISEIIKLREERGVDVVLVTGDLFDNPR 59 Query: 55 P-PSYARTLYNRFVVNLQQTGCHLVVLAGNHDS 86 P PS T F L+ +G ++++ GNHD+ Sbjct: 60 PSPSTYLTAIKGF-SRLRDSGLNVIITRGNHDA 91 >UniRef50_C5SCL6 Metallophosphoesterase n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SCL6_CHRVI Length = 384 Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 74/281 (26%), Positives = 109/281 (38%), Gaps = 43/281 (15%) Query: 1 MRILHTSDWHLGQNFYS----KSREAEHQAFLDWLLETAQTHQVDA---IIVAGDVFDTG 53 M+ LHT+DW LG+ F R QA LD L A + I+VAGD+FD+ Sbjct: 1 MKFLHTADWQLGKPFARIPDPDKRRRLQQARLDGLERLAAIARRAEARFILVAGDLFDS- 59 Query: 54 SPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ 113 PS AR+L + + +V + GNHD AF+ + A A + Sbjct: 60 --PSPARSLVSATFHAIGAMRLPVVAIPGNHDFGGPGGPWE--QAFVQQEMAALAPNFSI 115 Query: 114 ILPRRDGT-PGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACK-L 171 + R AV+ P P +Q+H+ T + + AC L Sbjct: 116 LTEERPLVLDEAVILPAPL-----------------RQRHVAHDPTGWIGR----ACDAL 154 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIG-TLDAFPAQNFPPADYIALGHIHRAQIIG 230 D+P ++A G + G++ + Y L P DYIALG H + I Sbjct: 155 PADRPWIVLAHGSVQGFGSADEEQGATTYNRLDLSRLPDGQI---DYIALGDWHGLKSID 211 Query: 231 GMEHVRYCGSPIPLSF--DECGKSKYVHLVTFSNGKLESVE 269 + Y G+P F E + + LV + G VE Sbjct: 212 --PRIWYSGTPEIDGFPKGEGHRPGHALLVEVARGVAPQVE 250 >UniRef50_Q8PUY5 DNA double-strand break repair protein mre11 n=2 Tax=Methanosarcina RepID=MRE11_METMA Length = 617 Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 1/87 (1%) Query: 1 MRILHTSDWHLG-QNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYA 59 +RILHT+D HLG + ++S+ R + + +++ A QVDA++ AGD+FD+ +P Sbjct: 5 IRILHTADTHLGYRQYHSEVRRQDFFKAFETVIKDAVDMQVDAVVHAGDLFDSRNPTLED 64 Query: 60 RTLYNRFVVNLQQTGCHLVVLAGNHDS 86 + L+ + GNH+S Sbjct: 65 LLETMNVLSRLKVANIPFFGIVGNHES 91 >UniRef50_A1RR97 Metallophosphoesterase n=5 Tax=Thermoproteaceae RepID=A1RR97_PYRIL Length = 386 Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 6/86 (6%) Query: 1 MRILHTSDWHLGQ-NFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYA 59 M+ILH SD HLG+ ++ RE ++ D L+ + DA+++ GD+FD P + A Sbjct: 1 MKILHISDAHLGRAQYHLPEREEDYFKAFDEALKRGKG--ADAVLITGDLFDLKRPSTKA 58 Query: 60 RTLYNRFVVNLQQTGCHLVVLAGNHD 85 +FV ++ + ++ GNHD Sbjct: 59 LV---KFVEAIEAVDIPIYIIGGNHD 81 >UniRef50_C7PVY9 Metallophosphoesterase n=5 Tax=Actinomycetales RepID=C7PVY9_CATAD Length = 385 Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 9/91 (9%) Query: 1 MRILHTSDWHL--GQNFYSKSREAEHQA----FLDWLLETAQTHQVDAIIVAGDVFDTGS 54 MR LHT+DW L G+ F R+ + A L L A + +AI+V GDVF+T + Sbjct: 1 MRFLHTADWQLGMGRRFLDPERQGQFDAARRDVLGTLGRLAVSEGCEAIVVGGDVFETNT 60 Query: 55 PPSYARTLYNRFVVNLQQTGCHLVVLAGNHD 85 ART+ + + L+ + +L GNHD Sbjct: 61 --ESARTV-RQAMEKLKGLPLKVFLLPGNHD 88 >UniRef50_UPI000038E4E2 DNA repair protein n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E4E2 Length = 373 Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 46/304 (15%) Query: 2 RILHTSDWHLGQNFYSKS-REAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 R LH SD HLG Y RE + + ++ VD + GD+FDT SP + A Sbjct: 3 RFLHLSDTHLGYRQYMMDLREEDFYESFNEAIDFGLEENVDFFVHTGDLFDTWSPSNRAM 62 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNE-SRDIMAFLNTTVVASAGHAPQILPRRD 119 + + ++ L + + ++ G+HD +E + I FL ++ Sbjct: 63 NEFKKAMIKLYKKNKTMYLIMGDHDRPKRTDEVASRIFDFLGVKLL-------------- 108 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 GT I + +++ + + G+ K ++ D Y++ AD I Sbjct: 109 GTEELQSIVINYGGEDILLSGISNMKGLRKN-----SLVDQYRK--AD-----------I 150 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFP-PADYIALGHIHRAQIIGGMEHV-RY 237 A + ++ S V I +++ P Y+A GH+H + +I V Y Sbjct: 151 EAKSYKNSIMMSHQ-GVSPYLIPEACEVDSKDLPVNYKYLAFGHVHDSYLITDKYPVFSY 209 Query: 238 CGSPIPLSFDEC------GKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITA 291 GS S +E GKS V+LV NGK+++ + + + T+ + + + AS Sbjct: 210 AGSTDLNSTNEIKNFLRNGKS--VNLVDIENGKIDA-QRVKLKSTRYLNAVNTNYASYMD 266 Query: 292 QLEQ 295 +++ Sbjct: 267 DMQK 270 >UniRef50_C5RIL1 Metallophosphoesterase n=1 Tax=Clostridium cellulovorans 743B RepID=C5RIL1_CLOCL Length = 370 Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 61/271 (22%), Positives = 105/271 (38%), Gaps = 51/271 (18%) Query: 1 MRILHTSDWHLGQNF------YSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGS 54 +R+LH +D HL F ++R+ E + +++ + QV ++AGD FD + Sbjct: 3 VRVLHCADIHLDTAFSYLSNTLKENRQEELREVFSNIIKIIKERQVQIFLIAGDFFDVEN 62 Query: 55 PPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQI 114 S R + ++ H+ + GNHD N +D+ N + + Sbjct: 63 VTSNTLYFLKRKLSEIKD--VHVFITPGNHDPYMLSNGHKDLETLDNVHIFKN------- 113 Query: 115 LPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGD 174 I + ++ + G +EK Y++ LR Sbjct: 114 -------------EIEKIYIEELNVNVYGFGFMEK---------------YSNKPMLRDF 145 Query: 175 QPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQ--IIGGM 232 Q + + T G SD+V + TL+ DY+ALGHIH+ + G Sbjct: 146 QIEDENSINIMVTHGDISSDSVYNPI--TLEDIKN---SKLDYLALGHIHKGTGLLKEGD 200 Query: 233 EHVRYCGSPIPLSFDECGKSKYVHLVTFSNG 263 + Y G+P SF+E G+ K V L+ + G Sbjct: 201 SYWAYPGNPQGRSFNEVGE-KGVLLLDITKG 230 >UniRef50_Q12VW7 Metallophosphoesterase domain protein n=1 Tax=Methanococcoides burtonii DSM 6242 RepID=Q12VW7_METBU Length = 485 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDW---LLETAQTHQVDAIIVAGDVFDTGSPPS 57 +RILHT D H+G Y E Q F+D +++ A +VD ++ AGD+FD+ +P Sbjct: 5 IRILHTGDTHIGYRQYHS--EVRRQDFIDAFSSVIDDAIDMKVDVVVHAGDLFDSRNPTL 62 Query: 58 YARTLYNRFVVNLQQTGCHLVVLAGNHDSVA-----TLNESRDIMAFLNT 102 + ++ L+Q + + GNH+S L ES DI + L T Sbjct: 63 EDILDTIKVLLKLKQQKIPFLSIVGNHESKQHTQWLDLFESMDIASRLGT 112 >UniRef50_Q7P2Q8 EXONUCLEASE SBCD n=8 Tax=Fusobacterium RepID=Q7P2Q8_FUSNV Length = 388 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/103 (28%), Positives = 57/103 (55%), Gaps = 14/103 (13%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDW------LLETAQTHQVDAIIVAGDVFDTG- 53 M+I+H SD HLG+ F S +++ + ++D+ ++ + + D ++AGD+FD Sbjct: 1 MKIVHCSDLHLGKRF-SGNKDYVKKRYMDFFNAFAVFVDRVEEIKPDVCLIAGDIFDKRE 59 Query: 54 -SPPSYART--LYNRFVVNLQQTGCHLVVLAGNHDSVATLNES 93 +P ++T L+ R N+++ ++ + GNHD+ L ES Sbjct: 60 INPDILSKTEYLFKRLKNNVKK---EIIAIEGNHDNSRILEES 99 >UniRef50_D0BLI1 DNA repair exonuclease n=1 Tax=Granulicatella elegans ATCC 700633 RepID=D0BLI1_9LACT Length = 404 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 11/95 (11%) Query: 1 MRILHTSDWHLGQNFYS----------KSREAEHQAFLDWLLETAQTHQVDAIIVAGDVF 50 +R +H +D HLG F ++ EA +AFL L++TA + VD ++++GD+F Sbjct: 2 IRFIHCADIHLGSPFTGLQQKNSTIAFQAIEATKKAFLT-LIDTAIKYHVDFVLISGDIF 60 Query: 51 DTGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHD 85 D+ + L Q G + ++ GNHD Sbjct: 61 DSNHQHIQEKIFLKEQFQRLAQAGIYTYLIHGNHD 95 >UniRef50_Q6L2H7 DNA repair protein n=1 Tax=Picrophilus torridus RepID=Q6L2H7_PICTO Length = 370 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 77/341 (22%), Positives = 143/341 (41%), Gaps = 56/341 (16%) Query: 1 MRILHTSDWHLG-QNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYA 59 +R +H SD HLG + + RE + + ++ VD + +GD+FDT P + A Sbjct: 2 VRFIHFSDTHLGYKQYMMDERENDFYEAFNEAIDIGINEHVDFFVHSGDLFDTWLPSNRA 61 Query: 60 RTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNE--SRDIMAFLNTTVVASAGHAPQILPR 117 + + ++ L + + ++ G+HD +E SR I FL ++ G+ + R Sbjct: 62 MNEFKKAMLKLYERNIDMYLIMGDHDRPKRRDEVASR-IFDFLGVHLL---GYDDLDVVR 117 Query: 118 RDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPL 177 + ++ I + + G+ Q L + Y++ AD Sbjct: 118 KKFDEEIIISGI------------SNMKGLRIPQLL-----ELYKK--AD---------- 148 Query: 178 PIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFP-PADYIALGHIHRAQIIGGMEHV- 235 +IA +V S + V +I + + P Y+A GHIH +++I + V Sbjct: 149 -VIAESEKNSVLIS-HEGVSPYFIKEQSEVDSSDLPVNYTYLAFGHIHDSKLIDNKKPVF 206 Query: 236 RYCGSPIPLS------FDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASI 289 Y GS F + GKS V+LV ++G SV + + T+ ++K D ++ Sbjct: 207 SYAGSTEINDTNELNHFKKYGKS--VNLVDINSGT-ASVSRIKLNSTRYQDLIKTDNINL 263 Query: 290 TAQLEQWRDVS---QEPPVWLDIEITTDEYLHDIQRKIQAL 327 L++ + + ++P + L I EY RK+ A+ Sbjct: 264 IIDLDKSLENATGIKKPLITLIINTEDKEY----SRKVLAM 300 >UniRef50_Q1D3U1 Metallophosphoesterase n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1D3U1_MYXXD Length = 375 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 80/321 (24%), Positives = 127/321 (39%), Gaps = 77/321 (23%) Query: 1 MRILHTSDWHLG------QNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGS 54 +RILH++DW +G + R+A +A + ++ A +VDA+++AGD+F+ Sbjct: 2 VRILHSADWQMGLRARHVAHVAEDVRKARLEAASN-VISAANRSKVDAVVLAGDIFEHN- 59 Query: 55 PPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSV--------ATLNESRDIMAFLNTTVVA 106 + + + L + + VL GNHD++ A+ N+ D + L+ Sbjct: 60 --VVEDRVVHAVIKVLAGSLAPVYVLPGNHDALTPDAVFRRASWNQRPDHITVLD----- 112 Query: 107 SAGHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYA 166 G+A +P D AVL P P + + + AG + Sbjct: 113 --GNAAVPIPHTD----AVLLPAPLRQKKGMKDPTAG----------------WEMASGL 150 Query: 167 DACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRA 226 D ++ +A G L G +D D I LDA DY+ALGH H Sbjct: 151 DVIRIG-------VAHGSLRIEGKHAAD---DFPI-ALDAAVRAGL---DYLALGHWHGQ 196 Query: 227 QIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDL 286 + G Y G+ F E G + + + S G VP +P+A G L Sbjct: 197 YVHDG--RTAYSGAHETTKFGEVGSGQALLVELSSRGA--------VPRLEPIAT--GAL 244 Query: 287 ASITAQLEQWRDVSQ--EPPV 305 T +L D+SQ EP V Sbjct: 245 TWRTVEL----DLSQGHEPEV 261 >UniRef50_B5K3U2 Exonuclease SbcD n=1 Tax=Octadecabacter antarcticus 238 RepID=B5K3U2_9RHOB Length = 383 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 8/97 (8%) Query: 1 MRILHTSDWHLGQ---NFYSKSREAEHQAFLDWLL---ETAQTHQVDAIIVAGDVFDTGS 54 +R +HT+D HL + F + ++ A A LD L A+ + + I++AGD FD + Sbjct: 12 VRFIHTADLHLAKPFGRFDADTQAALRVARLDALSCLGAAARVGKAEFILIAGDTFDAEA 71 Query: 55 PPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLN 91 PPS + + V + V+L GNHDS+A ++ Sbjct: 72 PPS--KVVRRALDVMAEFADLQWVLLPGNHDSLAAVD 106 >UniRef50_A8KXH2 Metallophosphoesterase n=2 Tax=Actinomycetales RepID=A8KXH2_FRASN Length = 425 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 69/288 (23%), Positives = 109/288 (37%), Gaps = 78/288 (27%) Query: 1 MRILHTSDWHLGQNFYSKSR-----------EAEHQAFLDWLLETAQTHQVDAIIVAGDV 49 MR++H +D HL +R +A +A + L++ + DA+++AGDV Sbjct: 1 MRLVHAADIHLDSPLRGLTRLGDGDLAHLLRQATRRALAN-LVDLSVDRAADALLLAGDV 59 Query: 50 FDTGSPPSYARTLYNRFVV----NLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVV 105 +D G+ YA RF V L+ G + +++GNHD+ + + +R + N V Sbjct: 60 YD-GTWRDYA---TGRFFVEQMGRLRDAGIPVYMISGNHDAESEI--TRSLTLPPNVRVF 113 Query: 106 ASAGHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHY 165 AS RP + GL + Q + AA+ D Q Y Sbjct: 114 ASD------------------------RPGTHVADDLGL-AVHGQSYATAAVHDNLVQRY 148 Query: 166 ADACKLRGDQPLPII------ATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIA 219 DA L G + ++ A GH S+ D R Y DY A Sbjct: 149 PDA--LAGLVNVGLLHTAADGAEGHANYAPCSEEDLARTGY---------------DYFA 191 Query: 220 LGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLES 267 LGH+H +++ G P+P G V +G L+ Sbjct: 192 LGHVHSHRVV--------HGGPLPGGTATRGDGPGGRQVAAFSGNLQG 231 >UniRef50_C6A1X6 DNA double-strand break repair Mre11 nuclease n=1 Tax=Thermococcus sibiricus MM 739 RepID=C6A1X6_THESM Length = 384 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 1/87 (1%) Query: 1 MRILHTSDWHLGQNFYS-KSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYA 59 MRI H +D HLG Y+ + RE + + +E +VD + AGD FD+ PP A Sbjct: 1 MRIAHIADTHLGYRQYNLEERENDIYEAFNEAVEKMIEERVDVFVHAGDFFDSPRPPIKA 60 Query: 60 RTLYNRFVVNLQQTGCHLVVLAGNHDS 86 + + L++ ++ + G HD+ Sbjct: 61 LYVAKEGIRKLREHNIKILTVLGEHDT 87 >UniRef50_Q0FZV9 Putative exonuclease n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0FZV9_9RHIZ Length = 412 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 9/100 (9%) Query: 3 ILHTSDWHLGQNFYSKSRE---------AEHQAFLDWLLETAQTHQVDAIIVAGDVFDTG 53 +H +D HLG F S + + + L+ A QVD +++AGDV+D Sbjct: 6 FIHAADLHLGSPFQSLAVKDAAIAARFAQATRGAFTKLVNQAIDRQVDFLVIAGDVYDGE 65 Query: 54 SPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNES 93 + +NR V L + +V L GNHD+ + + +S Sbjct: 66 WKDNSVGLFFNREVARLAKANIQVVFLRGNHDAESVVTKS 105 >UniRef50_UPI0001B434BF exonucleases SbcD n=2 Tax=Listeria monocytogenes RepID=UPI0001B434BF Length = 154 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 38/130 (29%), Positives = 53/130 (40%), Gaps = 10/130 (7%) Query: 129 IPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPIIATGHLTTV 188 +P+ P II N I + + A+T + + D K + I GH Sbjct: 27 VPYHEPA-IIREAFADNSIRSFEDAMQAVTKQIRSKW-DTSKAQ-------ILVGHAFVS 77 Query: 189 GASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGSPIPLSFDE 248 G SD+ R + IG +D F Y ALGH+H I + Y GSP+ SF E Sbjct: 78 GGIPSDSERQLAIGNVDRVSTNCFDGFTYTALGHLHHPHAI-RHPSIFYSGSPLKYSFSE 136 Query: 249 CGKSKYVHLV 258 K V +V Sbjct: 137 ANDHKSVRIV 146 >UniRef50_B1L7G0 DNA repair exonuclease, SbcD n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L7G0_KORCO Length = 389 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 1/86 (1%) Query: 1 MRILHTSDWHLGQ-NFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYA 59 MR++H SD HLG+ F RE + + ++ A + + D +I GD+FD+ P A Sbjct: 1 MRLVHLSDSHLGKAQFNLAEREEDFYSSFSRAIDIAISEKPDLLIYTGDLFDSYRPHPRA 60 Query: 60 RTLYNRFVVNLQQTGCHLVVLAGNHD 85 ++ L + G + ++ GNH+ Sbjct: 61 FVRAFESLMKLAERGIPIAIIEGNHE 86 >UniRef50_D2LYR1 Metallophosphoesterase n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LYR1_BACS4 Length = 408 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 56/258 (21%), Positives = 96/258 (37%), Gaps = 62/258 (24%) Query: 1 MRILHTSDWHLGQ----------NFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVF 50 +R +H +D HLG+ +F + + A +Q+F + ++ A VD ++++GDV+ Sbjct: 2 IRFIHCADLHLGRPIKTHADLPASFIKQLQSATYQSF-ESIVNKAIEFNVDFMLISGDVY 60 Query: 51 DTGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGH 110 D+ + + LQ+ + V+ GNHD + A H Sbjct: 61 DSEHRSYRGQWFLKKQAERLQKVNIPIYVIHGNHDPI-------------------KAEH 101 Query: 111 APQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACK 170 + LP + L ++ G + K YY Sbjct: 102 SNNRLPENVHVFSEKFEVVSLLTAKNEKVYLYGFSYPNKA---------YY--------- 143 Query: 171 LRGDQPLPIIAT-GHLTTV------GASKSDAVRDIYIG-TLDAFPAQNFPPADYIALGH 222 D P+P+ T G ++ G S + Y +L+ +N DY ALGH Sbjct: 144 ---DNPIPMYETIGEMSAYHIALLHGQESSQKDHEPYAPFSLNELKQKNI---DYWALGH 197 Query: 223 IHRAQIIGGMEHVRYCGS 240 IH+ QI+ V Y G+ Sbjct: 198 IHKRQILSSNPSVVYPGN 215 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0AG77 Nuclease sbcCD subunit D n=173 Tax=Proteobacteri... 534 e-150 UniRef50_D2T4P9 Exonuclease SbcD n=3 Tax=Erwinia RepID=D2T4P9_ERWPY 440 e-122 UniRef50_C7BK94 Nuclease sbccd subunit d n=1 Tax=Photorhabdus as... 436 e-120 UniRef50_D0ZEX0 Nuclease SbcCD, D subunit n=18 Tax=Proteobacteri... 429 e-118 UniRef50_A6VXU9 Nuclease SbcCD, D subunit n=2 Tax=Marinomonas Re... 375 e-102 UniRef50_A9BQD1 Nuclease SbcCD, D subunit n=5 Tax=Burkholderiale... 375 e-102 UniRef50_Q2LRF1 Exonuclease n=8 Tax=Bacteria RepID=Q2LRF1_SYNAS 369 e-101 UniRef50_A1SUG4 Exodeoxyribonuclease I subunit D n=2 Tax=Psychro... 369 e-100 UniRef50_Q480G5 Exonuclease SbcD n=1 Tax=Colwellia psychrerythra... 365 1e-99 UniRef50_B4RWA2 Exonuclease SbcD n=3 Tax=Alteromonadales RepID=B... 364 3e-99 UniRef50_Q3JD79 Exodeoxyribonuclease I subunit D n=11 Tax=Bacter... 361 3e-98 UniRef50_Q2FMB7 Exodeoxyribonuclease I subunit D n=2 Tax=cellula... 360 5e-98 UniRef50_UPI0000E0E5D5 exonuclease subunit SbcD n=1 Tax=Glacieco... 349 1e-94 UniRef50_B3EQD7 Nuclease SbcCD, D subunit n=1 Tax=Chlorobium pha... 348 2e-94 UniRef50_A4BZB7 Exonuclease SbcD n=2 Tax=Flavobacteriaceae RepID... 344 3e-93 UniRef50_D1Y745 Nuclease SbcCD, D subunit n=1 Tax=Pyramidobacter... 341 3e-92 UniRef50_C1TLY0 Exonuclease SbcD n=1 Tax=Dethiosulfovibrio pepti... 338 2e-91 UniRef50_C8NB09 Nuclease sbcCD subunit D (Fragment) n=1 Tax=Card... 338 2e-91 UniRef50_A5EW10 Exonuclease SbcD n=1 Tax=Dichelobacter nodosus V... 324 3e-87 UniRef50_C9M6Q6 Nuclease SbcCD, D subunit n=1 Tax=Jonquetella an... 320 7e-86 UniRef50_A3XL99 Exonuclease SbcD n=1 Tax=Leeuwenhoekiella blande... 317 4e-85 UniRef50_Q1VZW8 Exonuclease SbcD n=1 Tax=Psychroflexus torquis A... 316 9e-85 UniRef50_B8KMM7 Nuclease SbcCD, D subunit n=1 Tax=gamma proteoba... 313 5e-84 UniRef50_A0AJ98 SbcD protein n=27 Tax=Bacillales RepID=A0AJ98_LISW6 313 6e-84 UniRef50_Q0HTQ0 Exodeoxyribonuclease I subunit D n=26 Tax=Gammap... 309 9e-83 UniRef50_C9LQV4 Putative exonuclease SbcD n=1 Tax=Dialister invi... 309 1e-82 UniRef50_B0TDB7 Exonuclease sbcd n=1 Tax=Heliobacterium modestic... 304 3e-81 UniRef50_B8I3W2 Nuclease SbcCD, D subunit n=5 Tax=Clostridium Re... 304 4e-81 UniRef50_A8FTM6 Nuclease SbcCD, D subunit n=25 Tax=Gammaproteoba... 303 8e-81 UniRef50_C7HA25 Exonuclease SbcD n=4 Tax=Clostridiales RepID=C7H... 301 2e-80 UniRef50_A4VHU4 Exonuclease SbcD n=22 Tax=Gammaproteobacteria Re... 301 3e-80 UniRef50_Q0K4S8 DNA repair exonuclease, SbcD n=6 Tax=Bacteria Re... 300 4e-80 UniRef50_A9KNM2 Nuclease SbcCD, D subunit n=12 Tax=Bacteria RepI... 298 2e-79 UniRef50_Q3ICS5 Exonuclease sbcCD subunit D n=2 Tax=Alteromonada... 297 4e-79 UniRef50_A0LM47 Exodeoxyribonuclease I subunit D n=1 Tax=Syntrop... 297 4e-79 UniRef50_C7PNA9 Nuclease SbcCD, D subunit n=1 Tax=Chitinophaga p... 297 6e-79 UniRef50_D2NSE3 DNA repair exonuclease n=1 Tax=Rothia mucilagino... 297 7e-79 UniRef50_D2RLP4 Nuclease SbcCD, D subunit n=2 Tax=Acidaminococcu... 296 9e-79 UniRef50_Q5P494 Exonuclease SbcD n=1 Tax=Aromatoleum aromaticum ... 296 1e-78 UniRef50_A7VIT3 Putative uncharacterized protein n=1 Tax=Clostri... 295 2e-78 UniRef50_C4V2E2 Exonuclease SbcD n=1 Tax=Selenomonas flueggei AT... 295 3e-78 UniRef50_C6R472 Exodeoxyribonuclease I subunit D n=1 Tax=Rothia ... 294 5e-78 UniRef50_UPI000178998B nuclease SbcCD, D subunit n=1 Tax=Geobaci... 293 7e-78 UniRef50_Q1DDQ4 Nuclease SbcCD, D subunit n=3 Tax=Myxococcales R... 293 7e-78 UniRef50_A9BEV6 Nuclease SbcCD, D subunit n=1 Tax=Petrotoga mobi... 293 1e-77 UniRef50_A7HCA1 Nuclease SbcCD, D subunit n=1 Tax=Anaeromyxobact... 290 7e-77 UniRef50_A6KXN3 Putative exonuclease n=5 Tax=Bacteroides RepID=A... 289 1e-76 UniRef50_A3WLK0 Exonuclease SbcD, putative n=1 Tax=Idiomarina ba... 288 3e-76 UniRef50_C5CAA0 Exodeoxyribonuclease I subunit D n=4 Tax=Microco... 287 4e-76 UniRef50_C8WRD7 Nuclease SbcCD, D subunit n=2 Tax=Alicyclobacill... 287 5e-76 UniRef50_B7AP64 Putative uncharacterized protein n=1 Tax=Bactero... 286 9e-76 UniRef50_A1SK69 Exodeoxyribonuclease I subunit D n=2 Tax=Actinom... 286 9e-76 UniRef50_B3CEC9 Putative uncharacterized protein n=4 Tax=Bactero... 286 1e-75 UniRef50_Q6GH61 Nuclease sbcCD subunit D n=52 Tax=Staphylococcus... 285 1e-75 UniRef50_A7VZC9 Putative uncharacterized protein n=1 Tax=Clostri... 285 3e-75 UniRef50_C2EEA5 Exonuclease n=1 Tax=Lactobacillus ruminis ATCC 2... 285 3e-75 UniRef50_C7MH54 Exodeoxyribonuclease I subunit D n=3 Tax=Microco... 283 1e-74 UniRef50_B1YES6 Nuclease SbcCD, D subunit n=1 Tax=Exiguobacteriu... 282 1e-74 UniRef50_A6LCR3 Putative exonuclease n=6 Tax=Bacteroidales RepID... 282 1e-74 UniRef50_P23479 Nuclease sbcCD subunit D n=16 Tax=Bacillales Rep... 282 2e-74 UniRef50_A8U5M2 Exonuclease sbcD n=1 Tax=Carnobacterium sp. AT7 ... 282 2e-74 UniRef50_C4L7Q3 Nuclease SbcCD, D subunit n=9 Tax=Gammaproteobac... 282 2e-74 UniRef50_C7M699 Nuclease SbcCD, D subunit n=2 Tax=Capnocytophaga... 282 2e-74 UniRef50_C1I2I4 Nuclease SbcCD n=1 Tax=Clostridium sp. 7_2_43FAA... 281 3e-74 UniRef50_B0MBW6 Putative uncharacterized protein n=1 Tax=Anaeros... 281 3e-74 UniRef50_UPI0001C366D6 nuclease SbcCD, D subunit n=1 Tax=Clostri... 281 3e-74 UniRef50_A3YYZ0 Putative exonuclease n=1 Tax=Synechococcus sp. W... 281 4e-74 UniRef50_A7V415 Putative uncharacterized protein n=2 Tax=Bactero... 280 5e-74 UniRef50_B5I7A7 Exonuclease n=3 Tax=Actinomycetales RepID=B5I7A7... 280 6e-74 UniRef50_A5N4G1 Predicted exonuclease, sbcD related n=45 Tax=Clo... 280 9e-74 UniRef50_A7BEB8 Putative uncharacterized protein n=2 Tax=Actinom... 279 1e-73 UniRef50_A7LRG6 Putative uncharacterized protein n=5 Tax=Bactero... 278 3e-73 UniRef50_C3NXC1 Exonuclease SbcD n=22 Tax=Vibrio RepID=C3NXC1_VIBCJ 277 6e-73 UniRef50_C5NXT6 Nuclease sbcCD subunit D n=1 Tax=Gemella haemoly... 276 6e-73 UniRef50_C8P3T7 Exonuclease n=1 Tax=Erysipelothrix rhusiopathiae... 276 9e-73 UniRef50_Q2IN32 Exodeoxyribonuclease I subunit D n=3 Tax=Anaerom... 276 1e-72 UniRef50_C9KXE7 Nuclease SbcCD, D subunit n=10 Tax=Bacteroides R... 276 1e-72 UniRef50_B0NZF1 Putative uncharacterized protein n=1 Tax=Clostri... 275 2e-72 UniRef50_Q2JDN8 Exodeoxyribonuclease I subunit D n=24 Tax=Actino... 272 1e-71 UniRef50_C6D8R4 Nuclease SbcCD, D subunit n=81 Tax=Bacillales Re... 272 2e-71 UniRef50_A8VW68 N-acetyl-gamma-glutamyl-phosphate reductase n=1 ... 271 2e-71 UniRef50_D1BNU6 Nuclease SbcCD, D subunit n=3 Tax=Veillonella Re... 271 3e-71 UniRef50_C8PR34 Exodeoxyribonuclease I subunit D n=1 Tax=Trepone... 270 5e-71 UniRef50_C6VPS0 Exonuclease SbcD n=5 Tax=Lactobacillales RepID=C... 270 6e-71 UniRef50_C0VZX2 DsDNA exonuclease subunit n=1 Tax=Actinomyces co... 270 9e-71 UniRef50_C7N5B0 Exonuclease SbcD n=1 Tax=Slackia heliotrinireduc... 269 1e-70 UniRef50_C6XKD2 Nuclease SbcCD, D subunit n=1 Tax=Hirschia balti... 269 1e-70 UniRef50_D0L9F6 Nuclease SbcCD, D subunit n=5 Tax=Actinomycetale... 269 1e-70 UniRef50_D1PQD5 Exonuclease SbcD n=1 Tax=Subdoligranulum variabi... 269 1e-70 UniRef50_C8P7X3 Exonuclease SbcD n=1 Tax=Lactobacillus antri DSM... 268 2e-70 UniRef50_B6QZR0 Nuclease SbcCD, D subunit n=2 Tax=Alphaproteobac... 268 3e-70 UniRef50_A6DE84 Nuclease SbcCD, D subunit n=1 Tax=Caminibacter m... 268 3e-70 UniRef50_C8WDX4 Nuclease SbcCD, D subunit n=1 Tax=Zymomonas mobi... 268 3e-70 UniRef50_A6BHS2 Putative uncharacterized protein n=5 Tax=Clostri... 268 3e-70 UniRef50_C8PYK6 Nuclease SbcCD, D subunit n=2 Tax=Pseudomonadale... 268 3e-70 UniRef50_A5WEF9 Nuclease SbcCD, D subunit n=3 Tax=Psychrobacter ... 268 4e-70 UniRef50_C0W8J2 DsDNA exonuclease subunit n=1 Tax=Actinomyces ur... 267 6e-70 UniRef50_B5IJR3 Exonuclease n=1 Tax=Cyanobium sp. PCC 7001 RepID... 266 1e-69 UniRef50_C7TAC2 Exonuclease n=15 Tax=Lactobacillus RepID=C7TAC2_... 265 2e-69 UniRef50_C0EE10 Putative uncharacterized protein n=1 Tax=Clostri... 265 2e-69 UniRef50_D1VPG1 Nuclease SbcCD, D subunit n=1 Tax=Frankia sp. Eu... 265 2e-69 UniRef50_Q0S486 ATP-dependent dsDNA exonuclease SbcD n=6 Tax=Act... 265 3e-69 UniRef50_D2QSS6 Nuclease SbcCD, D subunit n=1 Tax=Spirosoma ling... 264 4e-69 UniRef50_B8D1T4 Exodeoxyribonuclease I subunit D n=3 Tax=Clostri... 264 5e-69 UniRef50_Q49XE0 Nuclease sbcCD subunit D n=12 Tax=Staphylococcus... 263 6e-69 UniRef50_C2M1T3 Nuclease SbcCD, D subunit n=3 Tax=Bacteroidetes ... 263 7e-69 UniRef50_D1BIQ6 Exodeoxyribonuclease I subunit D n=2 Tax=Actinob... 263 8e-69 UniRef50_A1ZGU7 DNA repair exonuclease n=1 Tax=Microscilla marin... 263 9e-69 UniRef50_B2GFI3 Nuclease SbcCD subunit D n=1 Tax=Kocuria rhizoph... 263 9e-69 UniRef50_A6TVN1 Nuclease SbcCD, D subunit n=6 Tax=Clostridiaceae... 263 9e-69 UniRef50_C9KJP5 Exonuclease n=3 Tax=Veillonellaceae RepID=C9KJP5... 263 9e-69 UniRef50_Q5LYZ3 ATP-dependent dsDNA exonuclease n=8 Tax=Bacteria... 263 1e-68 UniRef50_Q67MD2 DNA repair exonuclease n=1 Tax=Symbiobacterium t... 263 1e-68 UniRef50_D1ADM3 Nuclease SbcCD, D subunit n=2 Tax=Actinomycetale... 262 2e-68 UniRef50_O68033 Nuclease sbcCD subunit D n=1 Tax=Rhodobacter cap... 262 2e-68 UniRef50_A5ZTK8 Putative uncharacterized protein n=3 Tax=Firmicu... 262 2e-68 UniRef50_C4FEI0 Putative uncharacterized protein n=1 Tax=Bifidob... 262 2e-68 UniRef50_D2MLP9 Exonuclease SbcCD, D subunit n=1 Tax=Bulleidia e... 261 4e-68 UniRef50_D0LY15 Nuclease SbcCD, D subunit n=1 Tax=Haliangium och... 260 7e-68 UniRef50_C7GI85 Exonuclease SbcD (Fragment) n=1 Tax=Roseburia in... 260 7e-68 UniRef50_Q03P49 DNA repair exonuclease n=46 Tax=Lactobacillales ... 260 1e-67 UniRef50_C0EV38 Putative uncharacterized protein n=1 Tax=Eubacte... 259 1e-67 UniRef50_D1NTD7 Putative nuclease SbcCD, D subunit n=1 Tax=Bifid... 259 1e-67 UniRef50_Q73RC0 Nuclease SbcCD, D subunit, putative n=1 Tax=Trep... 259 1e-67 UniRef50_Q1NCL0 Nuclease SbcCD, D subunit n=1 Tax=Sphingomonas s... 258 2e-67 UniRef50_Q07GQ3 Exonuclease SbcD, putative n=1 Tax=Roseobacter d... 258 3e-67 UniRef50_D2LF15 Nuclease SbcCD, D subunit n=1 Tax=Rhodomicrobium... 258 4e-67 UniRef50_B7GYJ5 Exonuclease sbcD-like protein n=18 Tax=Acinetoba... 257 4e-67 UniRef50_UPI0001AF0806 nuclease SbcCD, D subunit n=1 Tax=Strepto... 257 5e-67 UniRef50_C3RMV8 Exonuclease sbcD n=3 Tax=Bacteria RepID=C3RMV8_9... 257 6e-67 UniRef50_C9RQA4 Nuclease SbcCD, D subunit n=1 Tax=Fibrobacter su... 256 9e-67 UniRef50_B3JFY8 Putative uncharacterized protein n=1 Tax=Bactero... 255 2e-66 UniRef50_C9L5R8 DNA repair exonuclease n=1 Tax=Blautia hansenii ... 255 3e-66 UniRef50_UPI00019735BC nuclease SbcCD, D subunit n=1 Tax=Clostri... 254 5e-66 UniRef50_B9EBU8 Putative uncharacterized protein n=1 Tax=Macroco... 253 9e-66 UniRef50_O67727 ATP-dependent dsDNA exonuclease n=2 Tax=Aquifica... 252 2e-65 UniRef50_A4X568 Exodeoxyribonuclease I subunit D n=3 Tax=Micromo... 250 5e-65 UniRef50_C6VTU7 Nuclease SbcCD, D subunit n=1 Tax=Dyadobacter fe... 250 1e-64 UniRef50_C7MLN3 Exonuclease SbcD n=1 Tax=Cryptobacterium curtum ... 250 1e-64 UniRef50_B9JT06 ATP-dependent dsDNA exonuclease protein n=3 Tax=... 249 1e-64 UniRef50_C8XKJ7 Nuclease SbcCD, D subunit n=2 Tax=Actinomycetale... 248 3e-64 UniRef50_B7KZ12 Nuclease SbcCD, D subunit n=8 Tax=Alphaproteobac... 247 4e-64 UniRef50_B6WA19 Putative uncharacterized protein n=1 Tax=Anaeroc... 245 3e-63 UniRef50_C7RGF6 Nuclease SbcCD, D subunit n=4 Tax=Anaerococcus R... 244 6e-63 UniRef50_C5RC55 Exonuclease n=1 Tax=Weissella paramesenteroides ... 243 6e-63 UniRef50_C7XXV6 Nuclease SbcCD n=1 Tax=Lactobacillus coleohomini... 243 7e-63 UniRef50_C9LH67 Exonuclease SbcCD, D subunit n=1 Tax=Prevotella ... 241 3e-62 UniRef50_C3WDH5 Nuclease SbcCD n=1 Tax=Fusobacterium mortiferum ... 241 4e-62 UniRef50_A8L1U9 Nuclease SbcCD, D subunit n=2 Tax=Actinomycetale... 238 2e-61 UniRef50_C2BSE2 Exonuclease SbcD n=1 Tax=Mobiluncus curtisii ATC... 235 2e-60 UniRef50_Q1J058 Nuclease SbcCD, D subunit n=3 Tax=Deinococcus Re... 235 2e-60 UniRef50_A3HX94 DNA repair exonuclease n=2 Tax=Bacteroidetes Rep... 233 1e-59 UniRef50_B2S3L6 Possible exonuclease n=2 Tax=Treponema pallidum ... 233 1e-59 UniRef50_B5HB15 Nuclease SbcCD n=1 Tax=Streptomyces pristinaespi... 232 1e-59 UniRef50_O51769 Nuclease sbcCD subunit D n=23 Tax=Borrelia RepID... 231 4e-59 UniRef50_D1PAG0 Nuclease SbcCD, D subunit n=1 Tax=Prevotella cop... 230 8e-59 UniRef50_C1XNQ0 Exodeoxyribonuclease I subunit D n=2 Tax=Meiothe... 228 4e-58 UniRef50_Q5SIS5 Exonuclease SbcD n=3 Tax=Thermus RepID=Q5SIS5_THET8 227 7e-58 UniRef50_C2KSA5 Possible exonuclease SbcD n=2 Tax=Mobiluncus mul... 226 1e-57 UniRef50_B4U9G5 Nuclease SbcCD, D subunit n=1 Tax=Hydrogenobacul... 222 2e-56 UniRef50_B5YJR9 Exonuclease SbcD n=1 Tax=Thermodesulfovibrio yel... 222 2e-56 UniRef50_D2MIT5 Exonuclease subunit SbcD (Fragment) n=1 Tax=Cand... 221 5e-56 UniRef50_D0LLB1 Nuclease SbcCD, D subunit n=1 Tax=Haliangium och... 220 6e-56 UniRef50_UPI00016C0A35 exonuclease sbcD n=1 Tax=Epulopiscium sp.... 219 1e-55 UniRef50_B2HL38 DNA repair exonuclease n=1 Tax=Mycobacterium mar... 207 5e-52 UniRef50_Q3ZXH4 Nuclease SbcD n=5 Tax=Dehalococcoides RepID=Q3ZX... 205 2e-51 UniRef50_UPI00016C3AE3 ATP-dependent dsDNA exonuclease n=1 Tax=G... 201 3e-50 UniRef50_B3QT16 Nuclease SbcCD, D subunit n=1 Tax=Chloroherpeton... 201 5e-50 UniRef50_C0Z548 Putative exonuclease sbcCD subunit D n=1 Tax=Bre... 193 1e-47 UniRef50_D1C2F9 Nuclease SbcCD, D subunit n=1 Tax=Sphaerobacter ... 192 2e-47 UniRef50_A7NIU3 Nuclease SbcCD, D subunit n=6 Tax=Chloroflexi (c... 190 9e-47 UniRef50_Q2S4Q6 Nuclease SbcCD, D subunit subfamily, putative n=... 190 9e-47 UniRef50_A4XJU8 Nuclease SbcCD, D subunit n=1 Tax=Caldicellulosi... 187 5e-46 UniRef50_C6P7X1 Nuclease SbcCD, D subunit n=1 Tax=Thermoanaeroba... 186 1e-45 UniRef50_B8HPI4 Nuclease SbcCD, D subunit n=28 Tax=Cyanobacteria... 186 2e-45 UniRef50_B9KXS7 Putative nuclease SbcCD, D subunit subfamily n=1... 185 2e-45 UniRef50_B9K7R6 Exonuclease n=6 Tax=Thermotogaceae RepID=B9K7R6_... 179 1e-43 UniRef50_B9MRD8 Nuclease SbcCD, D subunit n=1 Tax=Anaerocellum t... 176 1e-42 UniRef50_Q110K3 Nuclease SbcCD, D subunit n=3 Tax=Cyanobacteria ... 175 2e-42 UniRef50_C6JB59 Putative uncharacterized protein n=1 Tax=Ruminoc... 171 4e-41 UniRef50_UPI0001C419A3 DNA double-strand break repair protein Mr... 171 4e-41 UniRef50_Q2NFC6 DNA double-strand break repair protein Mre11 n=1... 166 2e-39 UniRef50_UPI000038E4E2 DNA repair protein n=1 Tax=Ferroplasma ac... 165 2e-39 UniRef50_Q6L2H7 DNA repair protein n=1 Tax=Picrophilus torridus ... 165 3e-39 UniRef50_B9NII9 Predicted protein (Fragment) n=1 Tax=Populus tri... 163 8e-39 UniRef50_A7BMU6 Exonuclease SbcD n=1 Tax=Beggiatoa sp. SS RepID=... 162 2e-38 UniRef50_A8F497 Nuclease SbcCD, D subunit n=1 Tax=Thermotoga let... 161 4e-38 UniRef50_C0QDX0 DNA repair exonuclease family protein n=1 Tax=De... 160 8e-38 UniRef50_C6IVB9 Metallophosphoesterase n=1 Tax=Paenibacillus sp.... 157 9e-37 UniRef50_A5UJE8 DNA repair exonuclease (SbcD/Mre11-family), Rad3... 156 2e-36 UniRef50_D1VDQ0 Nuclease SbcCD, D subunit n=1 Tax=Frankia sp. Eu... 153 1e-35 UniRef50_A2BM15 Predicted DNA repair exonuclease n=1 Tax=Hyperth... 152 2e-35 UniRef50_B5IR16 Ser/Thr protein phosphatase family protein n=1 T... 151 6e-35 UniRef50_Q9HLR7 DNA double-strand break repair protein mre11 n=3... 150 1e-34 UniRef50_A2C9B6 DNA repair exonuclease n=6 Tax=Cyanobacteria Rep... 147 7e-34 UniRef50_D1B7B2 Metallophosphoesterase n=1 Tax=Thermanaerovibrio... 143 1e-32 UniRef50_Q96YR6 DNA double-strand break repair protein mre11 n=1... 142 2e-32 UniRef50_A4J7M8 Metallophosphoesterase n=1 Tax=Desulfotomaculum ... 142 3e-32 UniRef50_Q0IAY7 DNA repair exonuclease n=1 Tax=Synechococcus sp.... 140 1e-31 UniRef50_Q041R3 DNA repair exonuclease n=28 Tax=Lactobacillus Re... 139 1e-31 UniRef50_C5RIL1 Metallophosphoesterase n=1 Tax=Clostridium cellu... 139 2e-31 UniRef50_D2EG17 Metallophosphoesterase n=1 Tax=Candidatus Parvar... 138 3e-31 UniRef50_C5RCI7 DNA repair exonuclease n=1 Tax=Weissella parames... 137 5e-31 UniRef50_Q39WB4 Metallophosphoesterase n=2 Tax=Geobacter RepID=Q... 136 1e-30 UniRef50_C4ZHC2 DNA repair exonuclease n=3 Tax=Clostridiales Rep... 136 2e-30 UniRef50_Q8TXI3 DNA double-strand break repair protein mre11 n=1... 135 2e-30 UniRef50_C5SCL6 Metallophosphoesterase n=1 Tax=Allochromatium vi... 135 3e-30 UniRef50_A5GT58 DNA repair exonuclease n=1 Tax=Synechococcus sp.... 135 3e-30 UniRef50_C0FS04 Putative uncharacterized protein n=1 Tax=Rosebur... 134 6e-30 UniRef50_C6A1X6 DNA double-strand break repair Mre11 nuclease n=... 133 1e-29 UniRef50_A4YET4 Metallophosphoesterase n=1 Tax=Metallosphaera se... 131 6e-29 UniRef50_A3X5K0 Exonuclease SbcD n=4 Tax=Rhodobacteraceae RepID=... 131 7e-29 Sequences not found previously or not previously below threshold: UniRef50_Q63EZ2 DNA repair exonuclease n=76 Tax=Bacillus RepID=Q... 151 3e-35 UniRef50_A6Q875 DNA double-strand break repair protein n=3 Tax=E... 150 8e-35 UniRef50_D2MIU1 Ser/Thr protein phosphatase family protein n=1 T... 144 4e-33 UniRef50_Q8U1N9 DNA double-strand break repair protein mre11 n=4... 143 9e-33 UniRef50_Q46GD4 Phosphoesterase n=2 Tax=Methanosarcina RepID=Q46... 143 9e-33 UniRef50_B2V861 Metallophosphoesterase n=3 Tax=Sulfurihydrogenib... 142 2e-32 UniRef50_C6D5T8 Metallophosphoesterase n=1 Tax=Paenibacillus sp.... 142 3e-32 UniRef50_Q12WJ5 Metallophosphoesterase-domain protein n=1 Tax=Me... 141 4e-32 UniRef50_UPI0001788541 metallophosphoesterase n=1 Tax=Geobacillu... 141 4e-32 UniRef50_A0B982 Metallophosphoesterase n=1 Tax=Methanosaeta ther... 141 5e-32 UniRef50_C8X1L4 Metallophosphoesterase n=1 Tax=Desulfohalobium r... 141 5e-32 UniRef50_B5Y7X6 Exonuclease SbcD n=1 Tax=Coprothermobacter prote... 141 7e-32 UniRef50_A8TGF4 Metallophosphoesterase n=1 Tax=Methanococcus vol... 140 8e-32 UniRef50_Q3B475 DNA repair exonuclease n=1 Tax=Chlorobium luteol... 139 2e-31 UniRef50_B6AP26 DNA repair exonuclease n=1 Tax=Leptospirillum sp... 137 5e-31 UniRef50_A5F9P1 SbcCD related DNA repair protein n=2 Tax=Clostri... 137 8e-31 UniRef50_Q03GD7 DNA repair exonuclease n=2 Tax=Pediococcus RepID... 137 8e-31 UniRef50_Q03QD8 DNA repair exonuclease n=1 Tax=Lactobacillus bre... 137 9e-31 UniRef50_O07522 Uncharacterized metallophosphoesterase yhaO n=5 ... 137 1e-30 UniRef50_D1CDB4 Metallophosphoesterase n=1 Tax=Thermobaculum ter... 136 1e-30 UniRef50_A8U9K7 Putative uncharacterized protein n=1 Tax=Carnoba... 136 2e-30 UniRef50_A0AKX5 Complete genome n=19 Tax=Listeria RepID=A0AKX5_L... 136 2e-30 UniRef50_C6I002 Metallophosphoesterase n=1 Tax=Leptospirillum fe... 135 3e-30 UniRef50_B8DIF5 Metallophosphoesterase n=4 Tax=Desulfovibrio vul... 134 5e-30 UniRef50_A6U7V3 Metallophosphoesterase n=9 Tax=Alphaproteobacter... 134 5e-30 UniRef50_Q04FF3 DNA repair exonuclease n=2 Tax=Oenococcus oeni R... 134 6e-30 UniRef50_B9M471 Metallophosphoesterase n=8 Tax=Bacteria RepID=B9... 134 6e-30 UniRef50_B1HVJ9 Putative uncharacterized protein n=3 Tax=Bacteri... 134 7e-30 UniRef50_B8D4A8 DNA double-strand break repair protein mre11 n=1... 133 9e-30 UniRef50_D1YYH3 Putative DNA double-strand break repair protein ... 133 1e-29 UniRef50_A6BZ13 Putative exonuclease n=1 Tax=Planctomyces maris ... 133 1e-29 UniRef50_A1S0I8 Metallophosphoesterase n=1 Tax=Thermofilum pende... 133 1e-29 UniRef50_C2EVZ4 DNA repair exonuclease n=1 Tax=Lactobacillus vag... 132 3e-29 UniRef50_Q7VCN7 DNA repair exonuclease n=1 Tax=Prochlorococcus m... 132 3e-29 UniRef50_C0GNG3 Metallophosphoesterase n=1 Tax=Desulfonatronospi... 131 4e-29 UniRef50_A1VMU8 Metallophosphoesterase n=2 Tax=Comamonadaceae Re... 131 5e-29 UniRef50_D1BQT8 Metallophosphoesterase n=3 Tax=Veillonella RepID... 131 5e-29 UniRef50_C1P8K4 Metallophosphoesterase n=1 Tax=Bacillus coagulan... 131 5e-29 >UniRef50_P0AG77 Nuclease sbcCD subunit D n=173 Tax=Proteobacteria RepID=SBCD_ECO57 Length = 400 Score = 534 bits (1376), Expect = e-150, Method: Composition-based stats. Identities = 400/400 (100%), Positives = 400/400 (100%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR Sbjct: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG Sbjct: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII Sbjct: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 Query: 181 ATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGS 240 ATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGS Sbjct: 181 ATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGS 240 Query: 241 PIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVS 300 PIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVS Sbjct: 241 PIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVS 300 Query: 301 QEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSEL 360 QEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSEL Sbjct: 301 QEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSEL 360 Query: 361 SVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHEA 400 SVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHEA Sbjct: 361 SVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHEA 400 >UniRef50_D2T4P9 Exonuclease SbcD n=3 Tax=Erwinia RepID=D2T4P9_ERWPY Length = 470 Score = 440 bits (1131), Expect = e-122, Method: Composition-based stats. Identities = 257/405 (63%), Positives = 304/405 (75%), Gaps = 6/405 (1%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRI+HT+DWHLGQ FY+KSR AEHQAFLDWLLE A+T Q DAIIVAGD+FD GSPPSYAR Sbjct: 64 MRIIHTADWHLGQFFYTKSRAAEHQAFLDWLLEQAETQQADAIIVAGDIFDNGSPPSYAR 123 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ----ILP 116 LYNRFVV LQ TGC LVVL GNHDSVA LNESR+++A LNT V+A+ + +L Sbjct: 124 QLYNRFVVKLQTTGCQLVVLGGNHDSVAMLNESRELLACLNTRVIAAVDEDIRQQVLVLN 183 Query: 117 RRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRG--D 174 RRDG PGA+LC IPFLRPRDI+ SQ+G +G EKQQ LL AI+D+YQ+ + +A R Sbjct: 184 RRDGQPGALLCAIPFLRPRDILRSQSGQSGREKQQSLLEAISDHYQRCWQEALAQRDALG 243 Query: 175 QPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEH 234 PLPIIATGHLTT+G +KSDAVRDIYIGTLDAFPA FPPADYIALGHIHRAQ I +H Sbjct: 244 LPLPIIATGHLTTMGVTKSDAVRDIYIGTLDAFPADGFPPADYIALGHIHRAQRIADSDH 303 Query: 235 VRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLE 294 +RY GSPIPLSFDE GK+K V V F GKL V L +P+ QPM ++KG L I QL Sbjct: 304 IRYSGSPIPLSFDELGKAKSVMRVDFHAGKLAGVTELPIPLFQPMQMIKGSLEQIERQLA 363 Query: 295 QWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQR 354 Q + ++ +WLDIEI TD YL + QR+I+ LT +LPVEV+L+RRSREQRE+V+A QQ Sbjct: 364 QLKPDARGKTIWLDIEIVTDAYLSEPQRRIEELTAALPVEVVLLRRSREQREQVIARQQN 423 Query: 355 ETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHE 399 ETLSELSVEEVF RRLA + +R+ LF TL + E + Sbjct: 424 ETLSELSVEEVFARRLASAPNQPERPERISALFAQTLEAVRHEEQ 468 >UniRef50_C7BK94 Nuclease sbccd subunit d n=1 Tax=Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949 RepID=C7BK94_PHOAA Length = 488 Score = 436 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 245/401 (61%), Positives = 310/401 (77%), Gaps = 7/401 (1%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRI+HTSDWHLGQ F++KSR AEH+ FL WL+E + +QVDA+IVAGDVFDTGSPPSYAR Sbjct: 70 MRIIHTSDWHLGQYFFTKSRAAEHKHFLHWLVEQIKNYQVDALIVAGDVFDTGSPPSYAR 129 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ----ILP 116 LYNRFVV LQ TGC L++L GNHDSVATLNES+++++ LNTTV+A+A PQ IL Sbjct: 130 ELYNRFVVELQPTGCQLIILGGNHDSVATLNESKELLSCLNTTVIANAEENPQKQIKILN 189 Query: 117 RRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRG--D 174 ++G GA+LC IPFLRPRDI+TSQAG +G +KQ L AI ++Y + Y AC+LR + Sbjct: 190 TQEGNAGAILCAIPFLRPRDIMTSQAGQSGEQKQLALQEAIAEHYNRLYRQACELRDQLN 249 Query: 175 QPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEH 234 PLP+IATGHLTT+GAS +D+VRDIYIGTLDAFPAQ FPPADYIALGHIHR QI+ EH Sbjct: 250 IPLPVIATGHLTTIGASVTDSVRDIYIGTLDAFPAQAFPPADYIALGHIHRPQIVAKSEH 309 Query: 235 VRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLE 294 +RY GSPIPLSFDE G+ K + LV F+ GKLES++ L VP QPM +++G+L I QL+ Sbjct: 310 IRYSGSPIPLSFDEVGQEKSLCLVEFAQGKLESIKLLPVPQYQPMQLIRGNLQQIEQQLQ 369 Query: 295 QWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQR 354 + D + PVWLDIE+ T +YLHDIQ++IQ++ LPVEV+L+RR++ QR+ +L + R Sbjct: 370 TFNDYQGKQPVWLDIEVATQDYLHDIQKRIQSMVAELPVEVILLRRAKIQRQNILTKENR 429 Query: 355 ETLSELSVEEVFNRRLALEEL-DESQQQRLQHLFTTTLHTL 394 ETL+ELS+ EVF RRL EL DE ++RL LF TL+ + Sbjct: 430 ETLTELSINEVFARRLEQTELNDEEHKKRLTTLFEQTLNEI 470 >UniRef50_D0ZEX0 Nuclease SbcCD, D subunit n=18 Tax=Proteobacteria RepID=D0ZEX0_EDWTE Length = 410 Score = 429 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 246/399 (61%), Positives = 297/399 (74%), Gaps = 5/399 (1%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR++HTSDWHLGQ+FY KSR EH+AFLDWLL A+ Q DAIIVAGD+FDTG+PPSYAR Sbjct: 1 MRLIHTSDWHLGQHFYGKSRADEHRAFLDWLLLQAEQQQADAIIVAGDLFDTGTPPSYAR 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVA--SAGHAPQILPRR 118 LYNRFVV LQ GC L+VLAGNHDSVATLNESR+++A L+T V+A A AP +L RR Sbjct: 61 ELYNRFVVALQGRGCQLIVLAGNHDSVATLNESRELLACLHTQVIAGAHADDAPLLLRRR 120 Query: 119 DGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGD--QP 176 DG+PGA+LC +PFLRPRD++ S+AG + EKQ L AI+D+Y Y A L+ QP Sbjct: 121 DGSPGAILCAVPFLRPRDLLQSRAGQSAAEKQLALQQAISDHYHALYQRALALQASLAQP 180 Query: 177 LPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVR 236 LPI+ATGHLTTVGAS S++VRDIYIGTLDA PA FPPADYIALGHIHR Q +G EH+R Sbjct: 181 LPIVATGHLTTVGASGSESVRDIYIGTLDALPASAFPPADYIALGHIHRPQRVGHAEHIR 240 Query: 237 YCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQW 296 Y GSPIPLSFDE G SK V LVT + G + L +P TQPM +LKG L I A +E Sbjct: 241 YSGSPIPLSFDELGSSKSVCLVTLAYGSAPQITQLPIPQTQPMRLLKGSLTEIGAAMEAL 300 Query: 297 RDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRET 356 R ++ + PVWLDIEI +D +L + +R +Q E+LPVE+LL+RRSREQR+R L Q ET Sbjct: 301 RPLATDKPVWLDIEIDSDGWLSESERTLQQQAETLPVEILLLRRSREQRQRALTMQAGET 360 Query: 357 LSELSVEEVFNRRLALE-ELDESQQQRLQHLFTTTLHTL 394 LSEL+ ++VF+RRLALE E D QQ R Q LF L + Sbjct: 361 LSELTPDDVFSRRLALEQESDPQQQARAQRLFQQVLQEI 399 >UniRef50_A6VXU9 Nuclease SbcCD, D subunit n=2 Tax=Marinomonas RepID=A6VXU9_MARMS Length = 425 Score = 375 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 177/419 (42%), Positives = 258/419 (61%), Gaps = 22/419 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLGQ+F KSR EH+AF+DWLL +DA+I+AGDVFDTGSPPSYAR Sbjct: 1 MKILHTSDWHLGQHFMGKSRRDEHKAFIDWLLALVDKESIDAVIIAGDVFDTGSPPSYAR 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTV-----VASAGHAPQIL 115 +Y++ V++++ C LV++AGNHDSV+ LNES+ ++ +L+T V + L Sbjct: 61 EMYHQLVLDMKARQCQLVIVAGNHDSVSMLNESKSLLTYLDTQVSSQANLEDIESHVIPL 120 Query: 116 PRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRG-- 173 + G A +C +P+LRP+D++ S AG + +K+ LL I D+YQ+ Y AC+ Sbjct: 121 KDKKGEVAAWVCAVPYLRPKDVMQSVAGQSEQDKKLSLLQMIGDFYQRVYEAACEKNKAL 180 Query: 174 DQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGME 233 P+PII TGHLT VG S++VRD+Y+GTL+A P FP DY+ALGHIHRAQ I Sbjct: 181 KTPVPIIGTGHLTAVGGQVSESVRDLYVGTLEALPTSVFPAFDYLALGHIHRAQPISKSG 240 Query: 234 HVRYCGSPIPLSFDECGKSKYVH------------LVTFSNGKLESVENLNVPVTQPMAV 281 RY GSPIPLSFDE G+ K + + + V+ + +P QPMA Sbjct: 241 RFRYSGSPIPLSFDELGRDKTLVMFDTDLLGEDTFVEDLFAEPTDPVQLVTIPNFQPMAS 300 Query: 282 LKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRS 341 LKG+L + Q+ +++++ +WL++ + DEYL D+ +++ + + P+E+L V R Sbjct: 301 LKGNLKEVIKQISAL-ELAEDKTLWLEVTVIADEYLSDVHKRLLEVIDGKPIELLRVMRR 359 Query: 342 REQRERVLASQQRETLSELSVEEVFNRRLALE-ELDESQQQRLQHLFTTTLHTLAGEHE 399 ++ + + R+TLSEL+V +VF + L ELDE + + L LF T L L EH+ Sbjct: 360 SAVEKKNESFEARKTLSELTVGDVFQQSLKSNLELDEEESKMLTELFQTCLVELE-EHQ 417 >UniRef50_A9BQD1 Nuclease SbcCD, D subunit n=5 Tax=Burkholderiales RepID=A9BQD1_DELAS Length = 425 Score = 375 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 203/419 (48%), Positives = 268/419 (63%), Gaps = 21/419 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR+LHTSDWHLGQ+F KSR+AEH A +DWLLE VDA+++AGD+FDTG+PPSYAR Sbjct: 1 MRLLHTSDWHLGQHFMGKSRQAEHAALIDWLLEQVDAQAVDAVLIAGDIFDTGAPPSYAR 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGH-----APQIL 115 LY++ VV L G L++L GNHDSVATL E+R+++A L+TTVVA+ G L Sbjct: 61 ELYSQLVVRLHAAGVALLLLGGNHDSVATLAENRELLACLDTTVVAAVGETASHVVELPL 120 Query: 116 PRRDGTPGA---VLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLR 172 RR G P A ++C +PF+RPRD++ SQ G + +KQQ L AAI Y+ + A R Sbjct: 121 RRRPGQPAAPGCIVCALPFMRPRDLVLSQPGQSAEQKQQALQAAIESCYRSVHDAAMARR 180 Query: 173 G------DQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRA 226 Q LPIIATGHLTTVGAS S++VR+IY+G+LDAFP FPPADY+ALGHIH+ Sbjct: 181 DALAAASGQRLPIIATGHLTTVGASSSESVREIYVGSLDAFPTSAFPPADYVALGHIHQP 240 Query: 227 QIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDL 286 Q +GG+EH+RY GSPI LSFDE +SK + LV L++V L VP QPMA + G L Sbjct: 241 QKVGGLEHIRYSGSPIALSFDEARQSKQMLLVDLGPEGLQAVTPLPVPCFQPMASVAGSL 300 Query: 287 ASITAQLEQWRDVS-QEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQR 345 ++ + VWL++ + D+YL + ++QAL + LPVE+L VRR R + Sbjct: 301 TALPDLMRAAAQAGSPARSVWLEVVVEQDDYLPQLTDRVQALADELPVELLRVRRQRGRA 360 Query: 346 ERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTL------AGEH 398 +A+ E+L E+S +VF RRLALE L+ Q L + + L AGEH Sbjct: 361 VAGMAAAAGESLHEISPADVFERRLALETLEPGLAQALTRRYQEVVAGLDAPQPGAGEH 419 >UniRef50_Q2LRF1 Exonuclease n=8 Tax=Bacteria RepID=Q2LRF1_SYNAS Length = 414 Score = 369 bits (948), Expect = e-101, Method: Composition-based stats. Identities = 143/407 (35%), Positives = 223/407 (54%), Gaps = 13/407 (3%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M++LHTSDWHLG+ + + R AEHQAFL+WL +T +D ++VAGDVFD +P + A+ Sbjct: 1 MKLLHTSDWHLGRALHGRKRYAEHQAFLEWLAALIETEDIDVLLVAGDVFDNSTPGNVAQ 60 Query: 61 TLYNRFVVNLQQTG-CHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ----IL 115 LY RF+ + + H+V+ AGNHDS + LN D++ FLN VV A +P+ + Sbjct: 61 ELYYRFLCRVAASSRRHVVITAGNHDSPSFLNAPGDLLKFLNIHVVGCACPSPEEELVTI 120 Query: 116 PRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL--RG 173 DG P ++C +P+LR RDI T++AG + +K++ ++ I D+Y++ Y A + R Sbjct: 121 AGADGEPRLIVCAVPYLRDRDIRTAEAGESVEDKERKIIEGIRDHYRKVYDAARRKNSRL 180 Query: 174 DQPLPIIATGHLTTVGASK--SDAVRDIYIGTLDAFPAQNFPP-ADYIALGHIHRAQIIG 230 P+PI+ GHL G D VR++YIGTL FPP DY+ALGH+H Q + Sbjct: 181 KSPVPIVVMGHLYAAGGKTVDGDGVRELYIGTLLHVGTDVFPPDIDYVALGHLHIPQTVS 240 Query: 231 GMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASIT 290 G+ +RY GSP+P+ F E + K V LV F ++VP + + L+GD +I Sbjct: 241 GLGRIRYSGSPLPIGFGEGTQEKSVMLVEF-PCSTSRATEISVPRFRELMTLRGDWQTIV 299 Query: 291 AQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLA 350 LE + S+ WL++ +E + +++ + +E+L VR +R + Sbjct: 300 RNLEDLK--SRGSNAWLEVIYEGNEMIGNMRALLDETIAGTGMEILRVRNNRILEHALKR 357 Query: 351 SQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGE 397 ETL +L +VF R L E+ E ++ L + L +L + Sbjct: 358 MTANETLEDLDTTDVFKRCLEAHEIPEEKRSALLDAYREILVSLNEQ 404 >UniRef50_A1SUG4 Exodeoxyribonuclease I subunit D n=2 Tax=Psychromonas RepID=A1SUG4_PSYIN Length = 408 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 164/403 (40%), Positives = 244/403 (60%), Gaps = 6/403 (1%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLGQ F K+RE+EH FL+WL+E Q+DA+IVAGD+FD+ SPPSYAR Sbjct: 5 MKILHTSDWHLGQYFMMKTRESEHLHFLNWLIEVVNKQQIDALIVAGDIFDSASPPSYAR 64 Query: 61 TLYNRFVVNLQQTGC-HLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGH--APQILPR 117 LY+ F+V LQ++ C L+++AGNHDS+A LNE++D++ L+ +V+A I+ Sbjct: 65 KLYSDFIVRLQKSSCRQLIIMAGNHDSIAVLNENKDLLKALDVSVLAGLSDDLNEHIIEL 124 Query: 118 RDG--TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQ 175 +D A++C +PFLR D++ S G + +KQ L I D YQ + A ++ Sbjct: 125 KDDRQNTQALVCALPFLRAADVMRSVQGSSAADKQISLQQGIADTYQSIFELANAQCHEK 184 Query: 176 PLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHV 235 LPIIATGHLT VG S SD+VR+IYIGTL AFPA FP +YIALGH+HRAQ + +H+ Sbjct: 185 ALPIIATGHLTAVGCSVSDSVREIYIGTLTAFPAVLFPAFNYIALGHLHRAQKVQKTDHI 244 Query: 236 RYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQ 295 RYCGSPI LSFDE + K ++++ F +V +PV Q M V+ GDL S+ QL++ Sbjct: 245 RYCGSPIALSFDETRQQKNINIIEFDTNNALTVNETVIPVFQRMQVISGDLESVIEQLQE 304 Query: 296 WRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRE 355 + W+++++ YL D+ + + +E+L + + + + Sbjct: 305 LKKELAGESAWIEVKLKQAFYLSDVHALLNEQVQESQIEILKISSPTINEKNQYQAADKS 364 Query: 356 TLSELSVEEVFNRRLALEE-LDESQQQRLQHLFTTTLHTLAGE 397 TL L+ ++F RL +E+ + Q+++L LF + + Sbjct: 365 TLDNLTPADLFQHRLQIEDSYSDQQREQLTKLFAEVCSEVEHK 407 >UniRef50_Q480G5 Exonuclease SbcD n=1 Tax=Colwellia psychrerythraea 34H RepID=Q480G5_COLP3 Length = 506 Score = 365 bits (938), Expect = 1e-99, Method: Composition-based stats. Identities = 210/439 (47%), Positives = 272/439 (61%), Gaps = 42/439 (9%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRI+HTSDWHLGQ FY KSR EHQ FL WLL H +DAIIVAGD+FDT +PPSYAR Sbjct: 1 MRIIHTSDWHLGQYFYGKSRANEHQQFLTWLLAQVTLHNIDAIIVAGDIFDTSTPPSYAR 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVAS------------- 107 +Y F+ L T C L++LAGNHDSVA L+ES+ ++A L+T V+ Sbjct: 61 EMYFDFIAKLHVTQCQLIILAGNHDSVAMLSESQAVLASLSTRVITQVIPASLSEDELEE 120 Query: 108 --AGHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHY 165 L DG A++C IPF+RPRD+I S+AG + +KQQ L AI+D+YQ Y Sbjct: 121 KALSKQVFPLHDADGKTTAIICAIPFVRPRDVIRSRAGQSASDKQQSLQQAISDHYQYLY 180 Query: 166 ------ADACKLRGDQPLPIIATGHLTTVG----ASKSDAVRDIYIGTLDAFPAQNFPPA 215 ADA + LPIIATGHLT +G SKSD+VRDIYIG+L+AFPA FPPA Sbjct: 181 QQARKQADAFEKTEGIALPIIATGHLTALGVSINDSKSDSVRDIYIGSLEAFPASAFPPA 240 Query: 216 DYIALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPV 275 DYIALGHIHRAQ + EH+RYCGSPI LSFDE + K V +V F++GKL VE L VP Sbjct: 241 DYIALGHIHRAQQVAKSEHIRYCGSPIALSFDEAKQDKRVLMVEFTSGKLNQVEALIVPC 300 Query: 276 TQPMAVLKGDLASITAQLE------QWRDVSQEPP----VWLDIEITTDEYLHDIQRKIQ 325 QP+ ++K + + L+ + R V+++ P WLDIEI ++L D+ +++ Sbjct: 301 FQPLYMVKTSVDELETSLQETLVAFEERQVAEKFPASVKAWLDIEIDNGDHLSDLSQRVT 360 Query: 326 ALTESLPVEVLLVRR---SREQRERVLASQQRETLSELSVEEVFNRRLALEE--LDES-- 378 L +P EVLLVRR +R++R+ L+ Q TLSELS+ EVF+ RL+ E DE Sbjct: 361 ELAVDMPFEVLLVRRCKKARQRRQAQLSQQDNSTLSELSLTEVFDSRLSQLEWQTDEEVA 420 Query: 379 QQQRLQHLFTTTLHTLAGE 397 ++ RL LFT + Sbjct: 421 RKTRLTQLFTELSVEMKQA 439 >UniRef50_B4RWA2 Exonuclease SbcD n=3 Tax=Alteromonadales RepID=B4RWA2_ALTMD Length = 515 Score = 364 bits (934), Expect = 3e-99, Method: Composition-based stats. Identities = 205/466 (43%), Positives = 272/466 (58%), Gaps = 67/466 (14%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLGQ+F++KSR+ EH AFL WLL+ + HQ+DAIIVAGDVFDTG+PPSYAR Sbjct: 24 MKILHTSDWHLGQSFFTKSRKKEHAAFLKWLLQQVEAHQIDAIIVAGDVFDTGTPPSYAR 83 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVV----ASAGHAPQILP 116 LY+ F+ LQ C LVVL GNHDSV+ LNES+ ++ +LN+ V+ L Sbjct: 84 ELYHAFIGELQGMQCTLVVLGGNHDSVSVLNESKALLKYLNSHVIASTYGEISEQVIALK 143 Query: 117 RRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRG--- 173 R G P AVLC +PF+RPRD++ S++G + +K+Q L AI +Y Y++A LR Sbjct: 144 NRKGQPSAVLCAVPFIRPRDVLVSESGQSATDKRQALGNAIKQHYASLYSEALTLRNTLG 203 Query: 174 ----------DQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHI 223 +PIIATGHLT +G S+S++VRDIYIGTL+ F A+ FPPADYIALGHI Sbjct: 204 NNRLEEGIDHSAAIPIIATGHLTALGVSQSESVRDIYIGTLEGFDAKGFPPADYIALGHI 263 Query: 224 HRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSN-GKLESVENLNVPVTQPMAVL 282 HR Q + EH+RY GSPIPLSFDE K + LV F ++ L VP Q M V+ Sbjct: 264 HRPQKVAKAEHIRYSGSPIPLSFDELTSQKQIVLVEFDGVSTTPNISTLPVPRFQAMEVI 323 Query: 283 KGDLASITAQLEQW------------------------------RDVSQEPPVWLDIEIT 312 KGDL +I A + + + + PVWL IE+ Sbjct: 324 KGDLKAIEAMINESEAIAYASLANEDQNASSEPLASHEASSSNEKPFGSKDPVWLCIEVE 383 Query: 313 TDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLAL 372 T++YL D+Q++IQ L E E+L ++R R++ + L+ +Q LSELSV EVF RLAL Sbjct: 384 TEDYLTDLQQRIQGLLEGKNAEILQLKRMRKRTVKSLSEKQNIQLSELSVNEVFEARLAL 443 Query: 373 EELDESQQQ-------------------RLQHLFTTTLHTLAGEHE 399 E LDE + R++HLF + + E Sbjct: 444 ESLDEEPNETSNEASELPQKNTEPSRIKRIKHLFAEAVALVHTNKE 489 >UniRef50_Q3JD79 Exodeoxyribonuclease I subunit D n=11 Tax=Bacteria RepID=Q3JD79_NITOC Length = 418 Score = 361 bits (926), Expect = 3e-98, Method: Composition-based stats. Identities = 148/410 (36%), Positives = 236/410 (57%), Gaps = 16/410 (3%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR+LHTSDWH+G+ Y + R E +AFL+WL ET Q H++DA++VAGDVFDT +P A+ Sbjct: 1 MRVLHTSDWHIGRTLYGRKRYEEFEAFLNWLAETIQQHEIDALLVAGDVFDTSTPSHRAQ 60 Query: 61 TLYNRFVVNLQQTGC-HLVVLAGNHDSVATLNESRDIMAFLNTTVVAS----AGHAPQIL 115 LY RF+ + + C H++V+AGNHDS + LN ++++ L+ VV S +L Sbjct: 61 ELYYRFLCWVAASSCRHVIVVAGNHDSPSFLNAPKELLKALDVHVVGSTTSDLEEEVLVL 120 Query: 116 PRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGD- 174 P ++C +P+LR RDI ++AG + +K++ L+ I +Y A A + R + Sbjct: 121 RNEQDAPELIVCAVPYLRDRDIRVAEAGESVEDKERKLIDGIRTHYAAVAALAEQKREEL 180 Query: 175 -QPLPIIATGHLTTVGASK--SDAVRDIYIGTLDAFPAQNFPP-ADYIALGHIHRAQIIG 230 +PI+A GHL T G D VR++Y+G+L A+ FP DY+ALGH+H Q + Sbjct: 181 GGDIPIVAMGHLFTAGGQTVDGDGVRELYVGSLAHVTAEVFPASFDYLALGHLHVPQKVK 240 Query: 231 GMEHVRYCGSPIPLSFDECGKSKYVHLVTFSN----GKLESVENLNVPVTQPMAVLKGDL 286 G E +RY GSP+P+ F E + K V V F + SV+ ++VPV Q + +KGD Sbjct: 241 GSETMRYSGSPLPMGFGEAKQQKSVCRVAFDPIEGHSRAASVQLIDVPVFQKLERIKGDW 300 Query: 287 ASITAQLEQWRDVS--QEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQ 344 I+++L + + +WL++ DE + D++ +++A P+E+L ++ +R Sbjct: 301 GGISSRLLELSAMGPPNGLRIWLEVIYEGDEVVGDLRERLEAAIAGTPMEILRIKNNRII 360 Query: 345 RERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTL 394 + ETL +L+V +VF R LA+ E+ E Q+ L ++ TL +L Sbjct: 361 DRMLGQIHAEETLDDLNVNDVFERCLAIHEVPEDQRPELLRVYRETLSSL 410 >UniRef50_Q2FMB7 Exodeoxyribonuclease I subunit D n=2 Tax=cellular organisms RepID=Q2FMB7_METHJ Length = 410 Score = 360 bits (924), Expect = 5e-98, Method: Composition-based stats. Identities = 144/407 (35%), Positives = 223/407 (54%), Gaps = 12/407 (2%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLG + R EH+ FL WLL VD +IVAGD+FDT +PP+ + Sbjct: 1 MKILHTSDWHLGNQICGRKRYDEHEQFLSWLLSLINREGVDILIVAGDIFDTTTPPNRSL 60 Query: 61 TLYNRFVVNLQQTGC-HLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ----IL 115 Y +F+ + C +++ AGNHDS + + R++ +LN TVV P+ IL Sbjct: 61 EQYYQFLARAAGSSCRQIIITAGNHDSPSLIAAPRELCKYLNITVVGQVPDDPEELITIL 120 Query: 116 PRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQ 175 +DG P ++CP+P+LR RD+ T QAG + EK +L+ I Y + A K+R + Sbjct: 121 KDQDGRPELIICPVPYLRDRDVRTMQAGESAGEKAANLIEGIKARYHAIGSCAEKMREEM 180 Query: 176 P--LPIIATGHLTTVGA--SKSDAVRDIYIGTLDAFPAQNFPP-ADYIALGHIHRAQIIG 230 +PIIATGHL G + D RD+Y+GTL + A FP DY+ALGH+H Q + Sbjct: 181 GDFIPIIATGHLFAAGGITREDDGCRDLYLGTLASVGADAFPSCIDYLALGHLHLPQRVC 240 Query: 231 GMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASIT 290 G + +RY G+P+P+ F E G++K V ++ + + SV+ + VPV Q + + G + Sbjct: 241 GNDRMRYSGAPLPMGFGEAGQTKSVLMLDVQDSRNMSVKEIPVPVFQQLRRISGAFEEVL 300 Query: 291 AQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLA 350 +L + + + P +++ + + D +I+ + PVEVL V+ R + + Sbjct: 301 KELGRLK--MEYSPALVEVILEDPRIIPDASERIRTTIQGSPVEVLKVKAQRISAQAMQP 358 Query: 351 SQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGE 397 + E+L+ LS EEVF+RRL E+ + ++Q L F L E Sbjct: 359 ERAEESLAGLSPEEVFHRRLDAAEIPKEERQELLESFHEIYSELLEE 405 >UniRef50_UPI0000E0E5D5 exonuclease subunit SbcD n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0E5D5 Length = 471 Score = 349 bits (895), Expect = 1e-94, Method: Composition-based stats. Identities = 171/416 (41%), Positives = 241/416 (57%), Gaps = 22/416 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M I+HTSDWHLGQ+F ++SR+AEHQ FLDWLL Q H +DA+IVAGD+FDT SPPSYAR Sbjct: 1 MNIIHTSDWHLGQSFINQSRQAEHQQFLDWLLTQVQAHAIDAVIVAGDIFDTTSPPSYAR 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVAS-----AGHAPQIL 115 +Y+ F+ + +T C LV+L GNHDSVA LNES + LNT ++ + A I Sbjct: 61 EMYHEFIGQIFKTDCTLVILGGNHDSVAVLNESLPLFKSLNTHMIPNSLSDPADQVVTIP 120 Query: 116 PRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRG-- 173 R+ G GA++C IPFLR RD++ + G +KQ L AITD+Y+ YA A R Sbjct: 121 DRKTGAVGAIVCAIPFLRQRDLVVTHTGEGDEDKQARLKHAITDHYEAVYAAAVAKRDAL 180 Query: 174 DQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGME 233 +PIIATGHLT VGA S++ RDIY+G L+ +P + FPPADYIALGHIHR Q + Sbjct: 181 GLSVPIIATGHLTAVGAKVSESERDIYVGNLENYPKEAFPPADYIALGHIHRPQAVSASR 240 Query: 234 HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVEN-----------LNVPVTQPMAVL 282 H+ Y GSPI LSFDE +K V ++F+ + N L +P Q M VL Sbjct: 241 HIYYSGSPIYLSFDELSYTKRVIKLSFNEHADSTHPNDQPAFTPQLTSLEIPCFQAMQVL 300 Query: 283 KGDLASITAQLEQW---RDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVR 339 G ++ I A ++ + + P W+ ++I + ++ I + V + + Sbjct: 301 SGSVSEIIADIQSFPLCPPEDKSPMTWVMVKINDPAFQGNVANTINEAAKGRAVVITKIM 360 Query: 340 RSREQRERVLASQQRETLSELSVEEVFNRRLALEEL-DESQQQRLQHLFTTTLHTL 394 R R+ + L+SQ +E L +L+ +VF +R+ + D LQ L+ T + + Sbjct: 361 RERDHSRQSLSSQDQENLDDLTPMDVFAKRIERAPVADHIDANALQQLYRTVVDNV 416 >UniRef50_B3EQD7 Nuclease SbcCD, D subunit n=1 Tax=Chlorobium phaeobacteroides BS1 RepID=B3EQD7_CHLPB Length = 498 Score = 348 bits (893), Expect = 2e-94, Method: Composition-based stats. Identities = 140/463 (30%), Positives = 226/463 (48%), Gaps = 68/463 (14%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLG++ Y + R E AFLDWL+ET + +D ++VAGDVFD+ +P + A+ Sbjct: 33 MKILHTSDWHLGRSLYGRKRYEEFSAFLDWLVETIEDEGIDVLLVAGDVFDSSTPGNRAQ 92 Query: 61 TLYNRFVVNLQQTGC-HLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA---PQILP 116 LY RF+ + + C H+VV+AGNHDS + LN ++++ LN V+ + A + Sbjct: 93 ELYYRFLCRVSNSCCRHIVVIAGNHDSPSFLNAPKELLRALNVHVIGAVTDALEDEVFVI 152 Query: 117 RRDGTPG----------------------AVLCPIPFLRPRDIITSQAGLNGIEKQQHLL 154 G+ A++C +P+LR +D+ T + G +K + L+ Sbjct: 153 DDFGSEKSDSGQTSGQLEFFHSKISDQKSAIICAVPYLRDKDVRTVEPGETIDDKNRKLV 212 Query: 155 AAITDYYQQHYADACKLR-------------------------GDQPLPIIATGHLTTVG 189 I ++Y + A + R P+PIIA GHL T G Sbjct: 213 EGIREHYARVVEIAEQKRHALLRQPAVRSQTSKIDTQKSKIQNHQSPIPIIAMGHLFTAG 272 Query: 190 AS--KSDAVRDIYIGTLDAFPAQNFPP-ADYIALGHIHRAQIIGGMEHVRYCGSPIPLSF 246 + D VR++Y+G+L + FPP DY+ALGH+H Q +GG EH+RY GSP+P+ F Sbjct: 273 GKTVEGDGVRELYVGSLAHVGKEVFPPSIDYVALGHLHVPQAVGGAEHIRYSGSPLPMGF 332 Query: 247 DECGKSKYVHLVTFS------------NGKLESVENLNVPVTQPMAVLKGDLASITAQLE 294 E + K + +V F + + L VP QP+ + G L I A+LE Sbjct: 333 GEANQQKSMVIVEFGLEKAVKLQKSPLKNQKSKISLLPVPCFQPLVRITGSLEDIQARLE 392 Query: 295 QWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQR 354 + + E WL+IE T E + +++ I+ +EV ++ + + ++ Sbjct: 393 ELKK--DESRAWLEIEYTGREIIGNLRESIEETLSDSSMEVRRIKNRMVMDRVIGSIEEE 450 Query: 355 ETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGE 397 E L +L +EVF R L ++ ++ L + + + E Sbjct: 451 EALDDLDAQEVFTRCLDAFDVPHEDREELNGAYNEVVRDVLEE 493 >UniRef50_A4BZB7 Exonuclease SbcD n=2 Tax=Flavobacteriaceae RepID=A4BZB7_9FLAO Length = 400 Score = 344 bits (883), Expect = 3e-93, Method: Composition-based stats. Identities = 121/401 (30%), Positives = 193/401 (48%), Gaps = 5/401 (1%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHT+DWHLG S+ E FL W+ + +D ++++GD+FDTG+P + Sbjct: 1 MKILHTADWHLGHRLLEHSQLEEQTLFLSWIESYIIENNIDVLLISGDIFDTGTPSHQSL 60 Query: 61 TLYNRFVVNLQQTGCH-LVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ--ILPR 117 +Y F+V L+ T C +V+ GNHDS TLN + ++ L+ VV A + + Sbjct: 61 GMYYNFLVQLKATTCKSVVITGGNHDSPGTLNAPKQLLDALSIKVVGKATEKIEDEVFEI 120 Query: 118 RDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPL 177 ++ +P+LR DI + AG + E A+ ++Y A C+ Sbjct: 121 EVLGEKVIVGAVPYLRDGDIRRAVAGESFDELTDKYKTALINHYHAS-AKQCEKINTSKA 179 Query: 178 PIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPP-ADYIALGHIHRAQIIGGMEHVR 236 P+IA GHL G S SD+ ++IY+GTL A++FP DYIALGH+HR QIIGG VR Sbjct: 180 PVIAMGHLFATGGSVSDSEQNIYVGTLGHIGAEDFPTYFDYIALGHLHRPQIIGGNAKVR 239 Query: 237 YCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQW 296 Y GSP LSF E K V ++T N + +++ +P + L G + T Q Sbjct: 240 YSGSPNILSFSEIDYDKKVIILTIENNTITTIKEGVIPCFREFYRLTGTVVECTDQFPNI 299 Query: 297 RDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRET 356 + W++I + D ++ K A S + + R+ + + ++ Sbjct: 300 ISNLYQLTPWVEIVLNEDRSVNTDSLKEMAKNHSFEILKTSFKNQRKTKGIEELLENAKS 359 Query: 357 LSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGE 397 + EL EVF + D +Q ++ F L ++ + Sbjct: 360 IKELVPTEVFRLKCKEMGFDLEEQPKIWDAFNEILQSVKSQ 400 >UniRef50_D1Y745 Nuclease SbcCD, D subunit n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y745_9BACT Length = 404 Score = 341 bits (874), Expect = 3e-92, Method: Composition-based stats. Identities = 141/406 (34%), Positives = 213/406 (52%), Gaps = 14/406 (3%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHTSDWHLG+ + R E + FLDWL +T + DA++VAGDVFD+ +PP +A+ Sbjct: 1 MRILHTSDWHLGRKLCGQERADEFRRFLDWLTDTLICERADALVVAGDVFDSYTPPLWAQ 60 Query: 61 TLYNRFVVNLQQTGCH-LVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ----IL 115 +LY RF+ L +T C V++AGNHDS A L+ R+++ L+ VV + P L Sbjct: 61 SLYYRFLTGLSRTPCRSAVIVAGNHDSAALLDSPRELLDRLDVHVVGAPAQDPGAEIFEL 120 Query: 116 PRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQ 175 P G GA+ C +PFLR RD+ + +G + + L +Y A A R + Sbjct: 121 PDAQGKTGALCCAVPFLRSRDLCGAMSGEDADAIARAELDGFAKHYADVCALAETRRAGR 180 Query: 176 PLPIIATGHLTTVGAS--KSDAVRDIYIGTLDAFPAQNFPP-ADYIALGHIHRAQIIGGM 232 +PI+A GH G + D VRD+ +G+L A P FP DY+ALGH+H Q GG Sbjct: 181 DVPIVALGHCFAAGGAVRDDDGVRDLAVGSLGAVPLSAFPENVDYLALGHLHMPQTCGGR 240 Query: 233 EHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQ 292 E RY G+P+ + F E G+ K V +V F G+ SV ++VPV Q + LKG I A Sbjct: 241 ESRRYSGAPLCMGFGEAGQKKQVCVVDFD-GRAASVRAVDVPVWQEILRLKGSFDEIAAA 299 Query: 293 LEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALT-ESLPVEVLLVRRSREQRERVLAS 351 L + + VW++ + DE + +I+ LT + V++L V+ + V + Sbjct: 300 LSELERSGR--SVWVEAD-CADEGARGLNDRIRELTGDGGAVKILRVKVADAGLAEVFSG 356 Query: 352 QQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGE 397 + + S EVF L+ +++ + + L + L + E Sbjct: 357 -AGDLNEDWSPREVFRLYLSEHQIEGEEAEALTGAYLEALEAMRTE 401 >UniRef50_C1TLY0 Exonuclease SbcD n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TLY0_9BACT Length = 404 Score = 338 bits (866), Expect = 2e-91, Method: Composition-based stats. Identities = 130/401 (32%), Positives = 205/401 (51%), Gaps = 10/401 (2%) Query: 3 ILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYARTL 62 +LHTSDWHLG++ + R E FLDWL VD ++VAGDVFDTG+P S + L Sbjct: 1 MLHTSDWHLGKSLCGRRRTEEQAEFLDWLAGLILRESVDLLLVAGDVFDTGTPGSGVQRL 60 Query: 63 YNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDGTP 122 Y RF+ ++ ++GC +VV+AGNHDS + L+ DI+ ++N V+ A +++ DG Sbjct: 61 YYRFLCSVAESGCSVVVVAGNHDSPSLLDAPSDILGYMNVFVLGVADPEREVVSIVDGDG 120 Query: 123 GAV--LCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQP-LPI 179 + + +P+LR RDI S + +++ + L + ++Y + + K P +P Sbjct: 121 EVIALVGAVPYLRERDIRRSSWSDDPMDRDRALALGVEEHYSRIFETMRKKSESSPGVPR 180 Query: 180 IATGHLTTVGA--SKSDAVRDIYIGTLDAFPAQNFPP-ADYIALGHIHRAQIIGGMEHVR 236 IA GHL G D RD+Y+G L FP DY+ALGHIH AQI+GG E R Sbjct: 181 IAMGHLFAAGGKVKDDDGSRDLYVGGLGRVGTDIFPDWLDYVALGHIHGAQIVGGRERCR 240 Query: 237 YCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQW 296 Y GSP+PL F E G K V+LV G S + VP + LKG+ +++ L + Sbjct: 241 YSGSPMPLGFGESGMEKSVYLVDLE-GPDFSCRAVPVPSRTEVISLKGNRHALSEGLSEL 299 Query: 297 RDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRET 356 V + P ++ + D ++ ++++ + VE+L V+ + + Sbjct: 300 VLVGR--PCLVEAVLCDDVPFSSLREDLESIVDGSSVELLRVKDGTGING-NWSFEVSGG 356 Query: 357 LSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGE 397 L ++ E+VF RRL L + + +F L + + Sbjct: 357 LESMTEEDVFLRRLEGVSLKQDVRDIYVAMFREVLQDILDQ 397 >UniRef50_C8NB09 Nuclease sbcCD subunit D (Fragment) n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NB09_9GAMM Length = 412 Score = 338 bits (866), Expect = 2e-91, Method: Composition-based stats. Identities = 151/404 (37%), Positives = 221/404 (54%), Gaps = 11/404 (2%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 +++LHT+D HLG++ Y + R E AFLDWL +DA+++AGD+FDT +P ++ Sbjct: 10 LKLLHTADIHLGRHLYGRRRHHEFAAFLDWLAAILDAEHIDALVIAGDIFDTATPSPRSQ 69 Query: 61 TLYNRFVVNLQQTGC-HLVVLAGNHDSVATLNESRDIMAFLNTTVVA---SAGHAPQILP 116 Y +F+ + C H+++ AGNHDS A L+ RDI+ LN V+ +L Sbjct: 70 AQYYQFLCRIAAGNCRHVIITAGNHDSPAFLDAPRDILRALNVHVIGAAREPADEVLLLR 129 Query: 117 RRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQ- 175 RDG P A++C +P+LR RD+ T+ AG + EK LL I +Y A A LR Sbjct: 130 DRDGAPEAIICAVPYLRERDLRTADAGESLAEKAGKLLDGIRAHYTAAVAHAETLRAAHG 189 Query: 176 -PLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPA-DYIALGHIHRAQIIGGME 233 LP+IATGHL T G S+A D IGTL PA FP A DY+ALGHIH AQ + E Sbjct: 190 ADLPLIATGHLYTAGGQTSEA-HDHEIGTLAHVPASAFPAAIDYLALGHIHLAQRLDSNE 248 Query: 234 HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQL 293 RY GSP+P +F E ++K V LVTF G+ +V L VP Q A L+GDL ++ AQ+ Sbjct: 249 TRRYSGSPLPHTFAEAAQNKTVCLVTF-QGRSAAVRPLAVPDFQKRARLRGDLPALEAQI 307 Query: 294 EQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQ 353 + +WL+I + ++ ++ ALT P+E+L ++ R + + + Sbjct: 308 NELAATGDN--IWLEIHYEGEAVEGGLRDRLHALTADTPLEILRLKNERIRERVLTQNTD 365 Query: 354 RETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGE 397 ETL +L+ +VF R LA + Q+ L+ + L L + Sbjct: 366 SETLDDLNPLDVFERCLAAHHISADQRDALRQNYREILAGLDDD 409 >UniRef50_A5EW10 Exonuclease SbcD n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EW10_DICNV Length = 396 Score = 324 bits (831), Expect = 3e-87, Method: Composition-based stats. Identities = 132/403 (32%), Positives = 210/403 (52%), Gaps = 12/403 (2%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILH++DWHLG + +SRE+E QAFLDW LET Q D +++AGD+FDT +PP A+ Sbjct: 1 MKILHSADWHLGAKLHGQSRESEQQAFLDWFLETLARVQPDILLLAGDIFDTATPPVSAQ 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGH--APQILPRR 118 Y F+ Q +V++AGNHDS A L+ + ++A + VV A A + Sbjct: 61 RQYYHFLYQAAQQCDAIVIIAGNHDSAAFLDAPQALLANMQIYVVGQAPQNAAEAVFALE 120 Query: 119 DGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLP 178 A++ +PFLR RDI +Q G + +K + + YYQQ A KLR P Sbjct: 121 TKNGRAIVAAVPFLRERDIRCTQVGESLADKASAIADGVRQYYQQAAEQAQKLRRGSE-P 179 Query: 179 IIATGHLTTVGASKS--DAVRDIYIGTLDAFPAQNFPP-ADYIALGHIHRAQIIGGMEHV 235 +IA GHL G + D VRD+++G L A FP DY+ALGH+H Q++ + Sbjct: 180 LIALGHLFAAGGKTTDHDGVRDLFVGKLGHLSATIFPQCFDYVALGHLHLPQMVAQNPRI 239 Query: 236 RYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQ 295 RY G+P+ + F E K++ + F + ++ + VPV Q + L+G ++ A++E Sbjct: 240 RYSGAPLMMGFGESVSEKHIVQLHFHE-RQPIIDAITVPVWQKLRQLRGRQETVIAEIEA 298 Query: 296 WRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRE 355 ++ E VWL+I I + + ++Q L + V++L +++ Q S R+ Sbjct: 299 L--LNDEAAVWLEIIIEEGVFDSALNARLQDLVANTSVKILRIQQPSTQDFVAALSDTRQ 356 Query: 356 TLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEH 398 +EVF +RL ++ ++ +L F T L + H Sbjct: 357 LYE---PQEVFAQRLEKTPFNDVEKAQLTADFLTILQQVHDAH 396 >UniRef50_C9M6Q6 Nuclease SbcCD, D subunit n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M6Q6_9BACT Length = 400 Score = 320 bits (819), Expect = 7e-86, Method: Composition-based stats. Identities = 115/400 (28%), Positives = 196/400 (49%), Gaps = 12/400 (3%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLG+ + + ++F WL+ + +VDA++V+GDVFD+ +PP +A+ Sbjct: 1 MKILHTSDWHLGKRLFGHNLREASESFCSWLVGLLEAERVDALLVSGDVFDSSTPPLWAQ 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA----PQILP 116 Y ++ ++ +VV +GNHDS L + + L V ++ Sbjct: 61 RCYFDVLLKARELCRAVVVTSGNHDSAEFLEITGIPLRELGIFVFGRPAEDLTEQVVMVQ 120 Query: 117 RRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQP 176 P ++ PFL D+ + + ++ + + YA A + + Sbjct: 121 NASSEPVGLVAAQPFLHESDLHRGSSLEDIEALREETYRCAQSRFAELYA-ASRALNPER 179 Query: 177 LPIIATGHLTTVGAS--KSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEH 234 LP++ HL VGA + D +RD+ IG LDAF + DY+ALGH+HRAQ + G E Sbjct: 180 LPVVCMAHLFAVGAKVGEGDGMRDLAIGGLDAFDCRALAGFDYVALGHVHRAQNVVG-EA 238 Query: 235 VRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLE 294 VRY GSP+ L F + G K + +V S G+ V + VP +A L G A I +L Sbjct: 239 VRYSGSPLALGFGDAGAVKTLSIVDVSAGETPIVREIPVPPFVKLARLSGSFAEILERLA 298 Query: 295 QWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQR 354 + ++ PVW+++ ++ D+ + Q + PVE+L V + + + Sbjct: 299 EL--TAKGEPVWVELTLSEPSRGRDLWSEFQQTAQDSPVEILCVHVPDDPAATLASC--P 354 Query: 355 ETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTL 394 + L E+S EVF + + ++ ++++ L+ LF + L Sbjct: 355 QQLEEMSPTEVFRKLMEETGVESARRESLETLFNRFVQEL 394 >UniRef50_A3XL99 Exonuclease SbcD n=1 Tax=Leeuwenhoekiella blandensis MED217 RepID=A3XL99_9FLAO Length = 405 Score = 317 bits (812), Expect = 4e-85, Method: Composition-based stats. Identities = 112/410 (27%), Positives = 192/410 (46%), Gaps = 15/410 (3%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHT+DWH+G+ + + + F+ WL+ Q ++ ++V+GDVFD +P + AR Sbjct: 1 MKILHTADWHIGKKLHKHYLYTDFERFISWLIAIIQEENIELVLVSGDVFDLANPSAEAR 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ----ILP 116 Y + + L C L++ GNHDS + L+ R+I+ LN ++ + + Sbjct: 61 KQYYKALKQLSNLNCKLIITGGNHDSPSMLDAPREILEALNVHILGGMPENLEDCLIPVQ 120 Query: 117 RRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQP 176 + V+ IPFLR DI +++G+ + + + I + Q A+ CK + Sbjct: 121 GKQDNDKLVVAAIPFLRDGDIRAAESGVTYENRIEAIRKGIEAVFTQA-AETCKQK-FPG 178 Query: 177 LPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPP-ADYIALGHIHRAQIIGGMEHV 235 LP+IA GHL G S++ RDI IG AF A F Y+ALGHIH+ Q + Sbjct: 179 LPVIAMGHLYAAGIEPSESERDIQIGNQAAFQASQFGEYFSYVALGHIHKPQRVSAAIPA 238 Query: 236 RYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQ 295 Y GSP+PLSF E K V ++ S G ++ +P + + + GDL I ++L+ Sbjct: 239 FYSGSPLPLSFSERTDEKRVLILNTSTGFEPK--SVAIPTFRKLNKVSGDLERIQSKLQT 296 Query: 296 WRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLP---VEVLLVRRSREQRERVLA-- 350 E +++E+ + + ++ L +E++ R + + R + Sbjct: 297 LTPEG-ELTNLIEVELIEENFDAHRIAQLDTLVTEFDTPGLEIVKHRATFKNRLKATGKL 355 Query: 351 SQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHEA 400 ++ L +L EVF + L DE + ++ F + L A Sbjct: 356 FDAQQHLEDLKPLEVFTKMLEQNSYDEETKTQVTLAFQELVEHLNTADPA 405 >UniRef50_Q1VZW8 Exonuclease SbcD n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=Q1VZW8_9FLAO Length = 403 Score = 316 bits (810), Expect = 9e-85, Method: Composition-based stats. Identities = 120/410 (29%), Positives = 204/410 (49%), Gaps = 18/410 (4%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHT+DWH+G+ + K + F+DW+ + + +D ++V+GDVFD +P S +R Sbjct: 1 MRILHTADWHIGKKLHKKELYQDFDLFIDWMCQFLPENDIDILLVSGDVFDFSNPSSESR 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ---ILPR 117 T Y R ++ L++ +++ GNHDS + L + I+ L+ V+ Q I Sbjct: 61 TQYYRTLIKLKKFDLKIIITGGNHDSPSVLEAPKAILNELDIHVIGQRPENLQDCLIPIY 120 Query: 118 RDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPL 177 +D V+ +P+LR RD+ N KQ+ + +I ++Q+ + A K D + Sbjct: 121 KDENVDLVIAALPYLRNRDLQERFDAENHDSKQKAVQQSIAYHFQEAASLAKKKYPD--V 178 Query: 178 PIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNF-PPADYIALGHIHRAQIIGGMEHVR 236 P++ GHL G S SD+ R+I IG L A +F YIALGHIH+ Q + + + Sbjct: 179 PLLGMGHLFAKGVSLSDSEREIQIGNLAGLDASHFGSNYSYIALGHIHKPQRLNSLTPIF 238 Query: 237 YCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQW 296 Y GSP PLSF E K + L+ S K E++++P + + ++KG L I +L + Sbjct: 239 YSGSPTPLSFSERKNEKRILLIDTS--KSFEPESISIPKFRDLILVKGSLEKIKQKLSEI 296 Query: 297 RDVSQEPPVWLDIEITTDEYLHDIQRKIQ-----ALTESLPVEVLLVRRSREQRERVLA- 350 ++ P+ IEI +E + I+ E+ E++ R S + + L Sbjct: 297 TNI---HPLQTLIEIEMEEENFSPSKTIELEEYIETFENEACEIVKHRVSFKYKPEGLRG 353 Query: 351 -SQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHE 399 + E +S+ + EVF+++L + E+ ++ L F L L + Sbjct: 354 ITSTEEQISDFTPLEVFHKKLESVDETETSKEELISAFEEILDELNRPEQ 403 >UniRef50_B8KMM7 Nuclease SbcCD, D subunit n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KMM7_9GAMM Length = 381 Score = 313 bits (803), Expect = 5e-84, Method: Composition-based stats. Identities = 94/391 (24%), Positives = 173/391 (44%), Gaps = 18/391 (4%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M++LHTSDWHLG+ + S + Q +D + A+ VDA+++AGD++D PP A Sbjct: 1 MKLLHTSDWHLGRFLHQHSLLDDQQHVVDQIAAIAKEESVDAVMIAGDLYDRAVPPGEAI 60 Query: 61 TLYNRFVVNLQ-QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 LY++F+ + G ++ +AGNHDS + ++ TV + Sbjct: 61 GLYDKFLDAICIDLGLPVLAIAGNHDSGERVGFGASLLGQAGYTVSGQLPETFVPVTLNA 120 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 G + +P+ +P + G+E H + + + P Sbjct: 121 GGESVDVFLVPYAQPAQVRDCY----GVECNTH------EEAMKFLLGKIEESRSGDRPT 170 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCG 239 + H G+S SD+ R++ +G D PA F DY+ALGH+H Q EH+RY G Sbjct: 171 VVMAHCFVAGSSVSDSERELSVGGADNIPADLFVNFDYVALGHLHGPQRCSE-EHIRYSG 229 Query: 240 SPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDV 299 SP+ SF E G +K V +V + + SV + + + +++G L+ I Q + Sbjct: 230 SPLKYSFSEVGHTKSVTIVEIGSSGV-SVAQRTLRSLRDVRIVEGLLSEILEQAK----T 284 Query: 300 SQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSE 359 ++ + ++ + D+ +++ + ++ ++V+ RS Q+ Sbjct: 285 DPGSEDYIQVRLSDSDSQLDVMARLREVYPNV-MQVVYTDRSSPLMSSAEDIQEHLHTGH 343 Query: 360 LSVEEVFNRRLALEELDESQQQRLQHLFTTT 390 F + + EEL+E+Q+ L + + Sbjct: 344 FDRFARFFKEIKGEELNEAQRSHLNLVISEV 374 >UniRef50_A0AJ98 SbcD protein n=27 Tax=Bacillales RepID=A0AJ98_LISW6 Length = 374 Score = 313 bits (802), Expect = 6e-84, Method: Composition-based stats. Identities = 101/390 (25%), Positives = 162/390 (41%), Gaps = 24/390 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ LHT+D HLG+ S AE + L + + A+ QVDA+I+AGD++D PP+ A Sbjct: 1 MKFLHTADLHLGKIVSGISILAEQEYILAQITKIAEEEQVDALILAGDLYDRAVPPADAV 60 Query: 61 TLYNRFVVNLQ-QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 + N +V + G + ++GNHDS L + + +P D Sbjct: 61 KVLNDILVKWNVELGIPIFAISGNHDSAERLAFGSQWYESSKLYMKGKCTSQFEAIPFMD 120 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 A + +P+ P II N I + + A+T + + DQ Sbjct: 121 ----AEVWLVPYHEPA-IIREVFADNTIRSFEDAMQAVTKQIRSKW--------DQTKAQ 167 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCG 239 I GH G SD+ R + IG +D F Y ALGH+H I + Y G Sbjct: 168 ILVGHAFVSGGIPSDSERQLAIGNVDRVSTDCFDGFTYTALGHLHHPHAI-RHPSIYYSG 226 Query: 240 SPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDV 299 SP+ SF E K V +V +L SV ++ M ++ G LA +T L Sbjct: 227 SPLKYSFSEANDVKSVRIVEIKGKELISVTERSLTPKHDMRIISGTLAELTENL------ 280 Query: 300 SQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSE 359 P + + + + L D K++ P + L R + +E + ++ + Sbjct: 281 VPNPNDFFQVNLMDEGALIDPMGKLRQF---YPNILHLERTKQTLKETEDSFEEIMKKDD 337 Query: 360 LSVEEVFNRRLALEELDESQQQRLQHLFTT 389 L + F + EL E+Q+Q+L +F Sbjct: 338 LELFGQFFEHVNGTELTETQKQKLVDVFEQ 367 >UniRef50_Q0HTQ0 Exodeoxyribonuclease I subunit D n=26 Tax=Gammaproteobacteria RepID=Q0HTQ0_SHESR Length = 400 Score = 309 bits (792), Expect = 9e-83, Method: Composition-based stats. Identities = 99/394 (25%), Positives = 182/394 (46%), Gaps = 23/394 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR +HTSDWH+G+ +++S + LD ++ A+ H VDA+I+AGD++D PP+ A Sbjct: 1 MRFIHTSDWHIGRQLHNQSLLEDQAYVLDQIVTLAEQHTVDAVIIAGDIYDRSIPPASAV 60 Query: 61 TLYNRFVVNL-QQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L + + L + G ++++AGNHD L + MA ++ + Sbjct: 61 ALLDEVLNRLITELGLQVLMIAGNHDGHERLGFAAKQMAASGLHIIGPLQADLTPIRLTS 120 Query: 120 GTPGAVLCPIPFLRP---RDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQP 176 + A P+P+ P R + + A G+ + +A + + + H Q Sbjct: 121 SSGDAYFYPLPYAEPATVRQVFEADAKGLGVSSHEEAMALLLEQVRSH--------DSQG 172 Query: 177 LPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVR 236 LP + H G S+S++ R + IG D + F DY+ALGH+H Q G EHVR Sbjct: 173 LPKVVVSHCFLDGGSESESERPLSIGGADKISPRLFSEFDYVALGHLHGPQY-KGSEHVR 231 Query: 237 YCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQW 296 Y GS + SF E + K V LV + ++ L + + + +++G+LA + Sbjct: 232 YSGSILKYSFSEQHQHKSVTLVDVTAHTPAQIQLLPLTALRDVRIIEGELAHLLD----L 287 Query: 297 RDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRET 356 + +L + + + D K++++ + VL + R+ + R+ Sbjct: 288 GKTDAKREDYLMVRLLDKHAILDAMGKLRSVYPN----VLHLERTGLMAGEQAVALNRDH 343 Query: 357 LS--ELSVEEVFNRRLALEELDESQQQRLQHLFT 388 + E+++ F +++ EEL ++QQ + + T Sbjct: 344 IKKGEMAMFRDFFSQVSGEELSDAQQAVMDEILT 377 >UniRef50_C9LQV4 Putative exonuclease SbcD n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQV4_9FIRM Length = 389 Score = 309 bits (791), Expect = 1e-82, Method: Composition-based stats. Identities = 88/390 (22%), Positives = 162/390 (41%), Gaps = 23/390 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFL-DWLLETAQTHQVDAIIVAGDVFDTGSPPSYA 59 M+ +HT+DWHLG+ FY + E + L + L + D I++AGDV+D PP+ A Sbjct: 14 MKFIHTADWHLGKLFYGEYLTEEQEWILKNQFLPLIDEEKPDVILLAGDVYDRSVPPAEA 73 Query: 60 RTLYNRFVVNLQ-QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRR 118 L++ V + + +V++GNHDS L+ + I+ + H + + + Sbjct: 74 VELFDEMVSEITGKRKIPFIVISGNHDSAERLSFASRILRGTGLFLCGDLYHTLEPVVLK 133 Query: 119 DGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLP 178 D P+P+ P + +A + + ++D+ + A + Sbjct: 134 DDDGEVAFAPLPYAEPGKVR--EALSADVHTHEEAERVLSDFLLRQIGHAARK------- 184 Query: 179 IIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYC 238 +A H G S SD+ R + IG D A F P +Y ALGH+H Q GG E+VRY Sbjct: 185 -VAIAHEFVAGGSASDSERPLSIGGTDLISADIFAPYNYTALGHLHGPQQAGGKENVRYS 243 Query: 239 GSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRD 298 GS + SF E + K V + +++ + ++KG + Sbjct: 244 GSLLKYSFSEATQKKGVIVGEIDGAGQVKTTFISLSPRHDVRIIKGFFDDLIK------- 296 Query: 299 VSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLS 358 E +L E+ + + D +++ + + + RR + + + Sbjct: 297 --GESEDFLMAELLDEGPVIDAMARLRQKYPRM-MTIQSHRRMNSGSGE-RSFDLMKKVD 352 Query: 359 ELSVEEVFNRRLALEELDESQQQRLQHLFT 388 L + VF + +E E ++ ++ L+ Sbjct: 353 PLDMFRVFYKEFQDKEFTEEEENYMKELWE 382 >UniRef50_B0TDB7 Exonuclease sbcd n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TDB7_HELMI Length = 387 Score = 304 bits (779), Expect = 3e-81, Method: Composition-based stats. Identities = 92/396 (23%), Positives = 160/396 (40%), Gaps = 22/396 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHT+DWHLG+ F+ + A LD ++ + + A+IVAGD++D PP A Sbjct: 1 MRILHTADWHLGRIFHQVHMTEDQAAVLDQFIDLIKDRRPHAVIVAGDIYDRSVPPVDAV 60 Query: 61 TLYNRFVVN-LQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L + + L ++++AGNHDS L + A + +P D Sbjct: 61 RLLDEVITRILLDHRTAVIMVAGNHDSADRLGFGNRLFAGRGFHLFGRLDRDMAPIPVED 120 Query: 120 GTPGAVLCPIPFLRPRDIITSQ-AGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLP 178 T CPIP+ P + + + + L + D+ + Sbjct: 121 ETGPVWFCPIPYAEPALVRETFGSSPEAVRGHNEALRVLADHMSARTPAGARR------- 173 Query: 179 IIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYC 238 IA H G +S++ + +G F Y ALGH+HR Q G + +RY Sbjct: 174 -IAVAHAFVTGGEQSESESFLTVGGAGTVDGSIFEGFHYTALGHLHRPQH-CGHDRIRYS 231 Query: 239 GSPIPLSFDECGKSKYVHLVTFSN-GKLESVENLNVPVTQPMAVLKGDLASITAQLEQWR 297 GS + SF E K + V G++ + E++ + + + L+G L I Sbjct: 232 GSLLKYSFSEADHQKGITFVELDGAGQITACESIALTPRRDVRRLEGYLNDILKGA---- 287 Query: 298 DVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRER--VLASQQRE 355 + ++ + + + + D KI+ + + VL ++R+ +R V + Sbjct: 288 APGENRQDYVMVTLLDEGAILDPIGKIRQVYPN----VLHIQRTFLERGSGAVRSVGDHR 343 Query: 356 TLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTL 391 L +L + F ++ LDE +Q + L Sbjct: 344 RLDDLDLFASFMEQVTGSPLDEEGRQVAADVIDDVL 379 >UniRef50_B8I3W2 Nuclease SbcCD, D subunit n=5 Tax=Clostridium RepID=B8I3W2_CLOCE Length = 388 Score = 304 bits (778), Expect = 4e-81, Method: Composition-based stats. Identities = 90/396 (22%), Positives = 167/396 (42%), Gaps = 20/396 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+I+HT DWH+G+ S + + L+ L+ + + DA+I+AGD+FD PP A Sbjct: 1 MKIIHTGDWHIGKIVNEFSMLEDQEYILNQLISVIENEKPDALIIAGDIFDRSIPPVDAV 60 Query: 61 TLYNRFVV-NLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L ++ L + +AGNHDS L+ + I+ + S + + D Sbjct: 61 ELVDKVFNIVLLDLRVPIFAIAGNHDSAERLSFASRILTNNGLHIAGSFDGNIRKVILED 120 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 G IP+ PR I N I + + + Q ++ + Sbjct: 121 GFGPVNFYLIPYSDPRTIRNILQD-NEISTHDDAMKKLVEKVGQA------ENENKRSVM 173 Query: 180 IATGHLTTVGASK---SDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVR 236 I G++T +G S++ R + IG D + F Y ALGH+H Q G +++R Sbjct: 174 ITHGYITYMGGQADIISESERPLSIGGTDIVNSNYFNSFSYTALGHLHAPQR-AGADNIR 232 Query: 237 YCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQW 296 Y GS + SF E + K +++V V+ + + M ++KG L + E + Sbjct: 233 YSGSLLKYSFSEVNQKKGINVVEIDGDGNSCVKLTELKPKRDMRIIKGPLEELLKS-EVY 291 Query: 297 RDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQR-- 354 +D + + ++ +T L D K++++ P + L + R+ S Sbjct: 292 KDTNTDD--YIYAILTDKGELIDPISKLRSV---YPNVMGLTKEIGISRDDNKTSASEGY 346 Query: 355 ETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTT 390 ++ S+L + + F + E L + + ++ + Sbjct: 347 KSKSKLELFQEFYSSIQGEPLSFEELKIIEKVIGEV 382 >UniRef50_A8FTM6 Nuclease SbcCD, D subunit n=25 Tax=Gammaproteobacteria RepID=A8FTM6_SHESH Length = 381 Score = 303 bits (775), Expect = 8e-81, Method: Composition-based stats. Identities = 94/392 (23%), Positives = 177/392 (45%), Gaps = 22/392 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ +HTSDWH+G+ +++S + + L +L A+ H+VDA+I+AGD++D PP+ A Sbjct: 1 MKFIHTSDWHIGRQLHNQSLIDDQRHILVQILALAEEHEVDAVIIAGDIYDRSIPPANAV 60 Query: 61 TLYNRFVVNL-QQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L + V +L ++++AGNHD L + M+ ++ + + Sbjct: 61 ALLDDVVNSLVNVMKLPVIMIAGNHDGHERLGFASRQMSDSGLHIIGPLHKELSPITLKG 120 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 + AV +P+ P + G + + + + +H Q LP Sbjct: 121 KSGSAVFYGLPYADPATVRQVFDCEAG--SHEQAMGVLLEQVHEH--------DSQGLPK 170 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCG 239 + GH G S+S++ R + IG D F P +Y ALGH+H Q G E VRY G Sbjct: 171 VVIGHCFLDGGSESESERPLSIGGADKISPTLFTPFNYTALGHLHGPQY-KGEEQVRYSG 229 Query: 240 SPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDV 299 S + SF E + K V LV F + +E L + + + +++G+L+++ Sbjct: 230 SILKYSFSEQHQKKSVTLVDFDSQGKAQIELLPLTAKRDVRIVEGELSALLEA----GKT 285 Query: 300 SQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLS- 358 +L + + + D K++++ + VL + R+ + +R+ + Sbjct: 286 DPNCDDYLMVRLLDKHAILDAMGKLRSVYPN----VLHLERTGLMTDNGQLEIRRDHIKK 341 Query: 359 -ELSVEEVFNRRLALEELDESQQQRLQHLFTT 389 EL + F +++ + ++E+QQQ + Sbjct: 342 GELDMFTEFFSQVSGDPMNEAQQQAMVQAIDE 373 >UniRef50_C7HA25 Exonuclease SbcD n=4 Tax=Clostridiales RepID=C7HA25_9FIRM Length = 408 Score = 301 bits (771), Expect = 2e-80, Method: Composition-based stats. Identities = 90/390 (23%), Positives = 160/390 (41%), Gaps = 17/390 (4%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR LH SD HLG+ S + + L+ +L +H VDA+++AGD++D PP+ A Sbjct: 30 MRFLHLSDLHLGKRVCEFSMLDDQRYILEQILSLLDSHPVDAVLLAGDLYDKPVPPAEAV 89 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 L + F+ L + ++GNHDS + ++A V P+ + D Sbjct: 90 RLLDWFLTELSHRELPVFAISGNHDSADRVAFGSALLAESRVYVSPVFSGPPEPITLTDA 149 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 L +PFL+P + IE LA + D+ D + Sbjct: 150 HGPVDLYLLPFLKPAMVRHIWPDAP-IESYNDALACVLDH----------CSPDPARRSV 198 Query: 181 ATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGS 240 H GA+ ++ +G +D A F DY+ALGH+H Q + G + +RYCG+ Sbjct: 199 LVAHQFVAGAASCESEEP-SVGGIDWVDAALFDKFDYVALGHLHSPQKV-GRDTLRYCGT 256 Query: 241 PIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVS 300 P+ SF E + K V V ++ + + L+G +T ++ Sbjct: 257 PLKYSFSEANQHKSVTFVELGEKGSVTIAAEPLVPRHDLRELRGSYMELT---DRRNYEG 313 Query: 301 QEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSEL 360 +L I +T ++ + + +++ + +L + + R + R+ + A + E + L Sbjct: 314 TTVDDYLHITLTDEQDIPEALARLRVIYPNL-MRLDYDNRRTQTRQELDAPAKAEQKTPL 372 Query: 361 SVEEVFNRRLALEELDESQQQRLQHLFTTT 390 F + + L Q Q L + Sbjct: 373 EHFADFYQLQNNQPLTHEQAAFCQQLIESI 402 >UniRef50_A4VHU4 Exonuclease SbcD n=22 Tax=Gammaproteobacteria RepID=A4VHU4_PSEU5 Length = 468 Score = 301 bits (771), Expect = 3e-80, Method: Composition-based stats. Identities = 126/415 (30%), Positives = 198/415 (47%), Gaps = 26/415 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR++HTSDWHLGQ +S+ R+ EH FL WLL+ H+ DA+++AGDVFDT +PP A+ Sbjct: 58 MRLIHTSDWHLGQTLHSQDRDHEHAQFLAWLLDQLVAHRADALLIAGDVFDTVNPPLKAQ 117 Query: 61 TLYNRFVVNLQQ--TGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASA--------GH 110 F+V + +V++AGNHDS + +M LN V H Sbjct: 118 EHLYDFIVRAHEKLPQLDIVMIAGNHDSGGRIELPAPLMKRLNAHAVGRISWVAEGQLDH 177 Query: 111 APQILPRRD--GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADA 168 ++P D G A +PFLRP ++ G +A I +++ A A Sbjct: 178 QRLLVPLHDAAGNTAAWCLTLPFLRPAEVTGMALG-------DDYMAGIRQVHERLIAAA 230 Query: 169 CKLRGDQPLPIIATGHLTTVGASKS-DAVRDIYIGTLDAFPAQNFPP-ADYIALGHIHRA 226 +R ++A H G + S ++ R+I IG +A PA FP Y+ALGH+H+ Sbjct: 231 EAVRQPGQ-ALVAMSHAHMAGGAVSEESERNIVIGNAEALPASLFPESVAYVALGHLHKP 289 Query: 227 QIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVL-KGD 285 Q + G +RY GSP+PLSF E V LV L+ V++L VP M + + Sbjct: 290 QQVAGQARIRYSGSPLPLSFAEVNYPHQVLLVELDGEALKQVDSLAVPRAVEMIRIGRAP 349 Query: 286 LASITAQLEQWRDVS--QEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSRE 343 LA + A LE E WL++ + DE L D++++I+ ++ + + Sbjct: 350 LAEVIAALEALPPTGLFDEHLPWLEVRVLLDEPLPDLRQRIETAITGKACRLVRIASEYD 409 Query: 344 QRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEH 398 + S+ L +++ +E+F R + + + +Q L F T L + H Sbjct: 410 GKRGETESEVLLGLDQITPQELFARAWEEQYGNPADEQALDD-FATLLQRVEFAH 463 >UniRef50_Q0K4S8 DNA repair exonuclease, SbcD n=6 Tax=Bacteria RepID=Q0K4S8_RALEH Length = 395 Score = 300 bits (769), Expect = 4e-80, Method: Composition-based stats. Identities = 98/392 (25%), Positives = 172/392 (43%), Gaps = 20/392 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 +R LHT+DWHLG+ F+++S + LD +E +T + DA+++AGDV+D PP A Sbjct: 14 LRFLHTADWHLGRLFHARSLLEDQAHILDQFVELVRTERPDAVLIAGDVYDRAVPPPEAV 73 Query: 61 TLYNRFVVNLQ-QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L + + + TG +V++AGNHDS L +M V A + D Sbjct: 74 ALLDDVLGRIVIDTGVPVVMIAGNHDSAQRLGFGARLMRAQGLHVAGRTLAAAACVTLHD 133 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 + +P+ P ++ G + + L A + DA + + Sbjct: 134 THGEVRIYALPYAEPA-VVRDAMGTDLPSHEAALRAQL---------DAIRAVHPPGVRA 183 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCG 239 + GH VG + S++ R + +G A A F D +ALGH+HR Q +GG V Y G Sbjct: 184 VVVGHAFVVGGAASESERPLSVGGSGAVAADLFAGFDLVALGHLHRPQTLGG-GRVHYAG 242 Query: 240 SPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDV 299 S + S EC K V + ++ + + + + V++G+LA++ A Sbjct: 243 SLLKYSLSECAHDKSVSRIELGADGAVAITPVPLQALRDVRVVEGELAAVLAA----GVD 298 Query: 300 SQEPPVWLDIEITTDEYLHDIQRKIQALTES-LPVEVLLVRRSREQRERVLASQQRETLS 358 + ++ +T L D +++ + + L +E ++ R+ E A ++ L Sbjct: 299 DPQRDDYIHARLTDTGALLDPMARLRQVYPNALAIERTVLARTGTASE---AGRKLRQLG 355 Query: 359 ELSVEEVFNRRLALEELDESQQQRLQHLFTTT 390 + F R +A EL+ Q+ L + T Sbjct: 356 TGELFANFFREVADAELEPDQRAVLDQVLTGI 387 >UniRef50_A9KNM2 Nuclease SbcCD, D subunit n=12 Tax=Bacteria RepID=A9KNM2_CLOPH Length = 375 Score = 298 bits (763), Expect = 2e-79, Method: Composition-based stats. Identities = 88/393 (22%), Positives = 160/393 (40%), Gaps = 22/393 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ +H SD H+G+ S + L +LE A + DA+++AGDV+D P Sbjct: 1 MKFMHLSDLHIGKRVNEFSMIEDQTYILQKILELADEEKPDAVLIAGDVYDKNLPTIEGV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 L + F+ +L + + +++GNHDS LN + I+ + + DG Sbjct: 61 NLLDDFLSDLHKRKIPVFMISGNHDSAERLNFASRILRNNEVYIAGTYQGEIARYTLNDG 120 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 + +PF++P + GIE + AI + + A+ I Sbjct: 121 HGPVNIYLLPFVKPA---IASVYHEGIESYHDAVKAILAAAKVNKAE----------RNI 167 Query: 181 ATGHLTTVGASKS----DAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVR 236 H S D+ +I +G LD F +Y+ALGH+H Q I G + VR Sbjct: 168 LVAHQFVTAGDISPECCDSE-NISVGGLDNVDVSVFDDFEYVALGHLHGPQRI-GRDTVR 225 Query: 237 YCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQW 296 Y GSP+ SF E + K V +VT E + + + M LKG + + L Sbjct: 226 YAGSPLKYSFSEAKQKKSVTMVTIDTKGEIKQEYIPLIPLRDMRQLKGPIDEL---LNPK 282 Query: 297 RDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRET 356 + ++ +T +E ++D +I+++ ++ +++ L ++ Sbjct: 283 NYHNGNTKDYIHATLTDEEEIYDAIGRIRSIYPNVMRIEFDNSKTKPNETAKLVAEDVIR 342 Query: 357 LSELSVEEVFNRRLALEELDESQQQRLQHLFTT 389 L + E F + + + Q + ++ L Sbjct: 343 KDPLCLFEEFFKNQNNVSMSDEQNEIMKKLLFE 375 >UniRef50_Q3ICS5 Exonuclease sbcCD subunit D n=2 Tax=Alteromonadales RepID=Q3ICS5_PSEHT Length = 415 Score = 297 bits (761), Expect = 4e-79, Method: Composition-based stats. Identities = 118/423 (27%), Positives = 201/423 (47%), Gaps = 33/423 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M++LHTSDWHLGQ FY R EH AF WLL T Q+D ++VAGD++ T +P + A Sbjct: 1 MKVLHTSDWHLGQQFYEYDRRHEHLAFFTWLLATLVEQQIDLLLVAGDIYHTATPSASAE 60 Query: 61 TLYNRFVVNLQQ--TGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASA---GHAPQIL 115 +F+ + ++ H+V++AGNHDS + ++ ++A +T VV A ++ Sbjct: 61 NQLYQFIKDAKKQCPNLHVVIIAGNHDSANRILAAQPLLAQFDTHVVGRFEATAAADTVI 120 Query: 116 PRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQ 175 AV+ +PFLR D+ T +G Q + Y+ A L+ + Sbjct: 121 TINTNKKRAVIVAMPFLRASDVTTLSQTKSGPSYAQ----GVKKAYELALEHAATLQSE- 175 Query: 176 PLPIIATGHLTTVGAS-KSDAVRDIYIGTLDAFPAQNF-PPADYIALGHIHRAQIIGGME 233 P+I GHL G SD+ R++ IG +A A F A Y+ALGH+H+AQ + E Sbjct: 176 NTPLIVMGHLHAKGGDISSDSERNLVIGGEEAISANVFGKQAHYVALGHLHKAQQVAKNE 235 Query: 234 HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLES----VENLNVPVTQPMAVLKG----D 285 +RY G+PIP+SF E S V++V F++ + + V L +P + VL Sbjct: 236 CIRYSGTPIPMSFSERNYSHQVNVVEFNSDEKQQISVTVNPLYIPRLADVIVLPKGECVP 295 Query: 286 LASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQR 345 LA + +++ + +L +++ + + + +I+ E + + R REQ Sbjct: 296 LAELCEEIKALDTTANTIAPYLRVKLKSSDTDTTFREQIEQALEGKHIRFCGIERVREQA 355 Query: 346 ERVLASQQRETLSELSV-------EEVFN--RRLALEELDESQQQRLQHLFTTTLHTLAG 396 E L+E+ + E+ F + + E + + L++L ++ L Sbjct: 356 ANNEGGAVFEDLTEVEMLNPLNLLEQAFANDKDMHGESVPD----ALKNLLNDVINELEE 411 Query: 397 EHE 399 + + Sbjct: 412 QQQ 414 >UniRef50_A0LM47 Exodeoxyribonuclease I subunit D n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LM47_SYNFM Length = 383 Score = 297 bits (761), Expect = 4e-79, Method: Composition-based stats. Identities = 91/402 (22%), Positives = 167/402 (41%), Gaps = 25/402 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHT+DWHLG+ F+ A+ LD L+ A + D ++V+GDV+D PP A Sbjct: 1 MRILHTADWHLGRIFHGVHLTADQAFVLDRLVRLASESKPDVVLVSGDVYDRAVPPPDAV 60 Query: 61 TLYNRFVVNL-QQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L + + L ++++AGNHDS L+ ++A + + + D Sbjct: 61 ALLDDTLSRLVLGLRIPVILIAGNHDSPERLSFGSKVLAAQCLHLAGTPAPDATPVVIDD 120 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 C +P+ P + + ++ + A I ++ + R Sbjct: 121 RHGPVSFCSLPYAEPALVRERLDRKDVVDHDSAMAAQI---------ESARRRLPAGSRA 171 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCG 239 + H G +S++ R + +G A ++F Y ALGH+HR Q G +HV+Y G Sbjct: 172 VLVAHAFVAGGIESESERSLSVGGAAAVGVEHFEGFHYAALGHLHRPQR-AGADHVQYAG 230 Query: 240 SPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDV 299 S + SF E G++K V+LV +VE + + + + ++G + A Sbjct: 231 SLLCYSFAEAGQTKSVNLVELDAAGRCAVERIPLAPSHEVRCIRGAFRELLAGPRA---- 286 Query: 300 SQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRET--L 357 ++ ++ +T E + D ++ + + +L + RS R+ L Sbjct: 287 AESREDYIMAVLTDKEPILDAHGRLSEIYPN----LLHIERSHLAAAGETGGAARDHRRL 342 Query: 358 SELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHE 399 S+L + F ++ +EL Q + + + L Sbjct: 343 SDLELFRAFFSQVTGDELTPEQAE----AYAEIVENLRRAER 380 >UniRef50_C7PNA9 Nuclease SbcCD, D subunit n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PNA9_CHIPD Length = 414 Score = 297 bits (759), Expect = 6e-79, Method: Composition-based stats. Identities = 124/423 (29%), Positives = 191/423 (45%), Gaps = 33/423 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHT+DWH+GQ FY R EHQ FL WL++T + H V+ +I++GDVFD +P + A Sbjct: 1 MKILHTADWHIGQTFYQYDRTYEHQQFLHWLVDTIKAHDVELLIISGDVFDIANPSAVAI 60 Query: 61 TLYNRFVVNL--QQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ----- 113 L+ F+ + Q G ++V AGNHDS A L + ++ + +V Sbjct: 61 KLFYAFLNSAVKAQPGLQIIVTAGNHDSAARLEAPKPLLESSDIHIVGLIERKEDGSINY 120 Query: 114 -----ILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADA 168 + R+G IPFLR D E + ++ Y++ Y A Sbjct: 121 EKMLIPVRDRNGETVLWCMAIPFLRMGDYPAV------AESETLYADGVSALYKEAYEHA 174 Query: 169 CKLRGDQPLPIIATGHLTTVGASKSD---AVRDIYIGTLDAFPAQNF-PPADYIALGHIH 224 + IIA HL T+ A SD + R I G ++ PA+ F Y+ALGHIH Sbjct: 175 LTKKQGGQG-IIAMAHLHTLDAELSDHDKSERVIM-GGIEFVPAKAFHEELLYVALGHIH 232 Query: 225 RAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKG 284 +AQ IGG EH+RY GSP+P+SF E V SNG + +E L +PVT + + Sbjct: 233 KAQKIGGKEHIRYSGSPLPMSFSEMNYKHQVVSFDISNGVMSGLEMLEIPVTTELLRVPA 292 Query: 285 DLASITAQLEQWRDVSQ-----EPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLV- 338 I A LE + + +L++ + + ++ KI+ V + + Sbjct: 293 KPQPIEAVLEALLQLPEATETIHTAPYLEVRVLLEGPEPALRHKIETALAGKHVRLAKID 352 Query: 339 --RRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAG 396 S L ELS ++F +++ E+ + + L LF L + Sbjct: 353 VRYPSSAAEGTGERIASAAQLQELSPLDIF-KKIYQEDYERETPEELVALFQQVLQEINT 411 Query: 397 EHE 399 + E Sbjct: 412 KEE 414 >UniRef50_D2NSE3 DNA repair exonuclease n=1 Tax=Rothia mucilaginosa DY-18 RepID=D2NSE3_9MICC Length = 409 Score = 297 bits (759), Expect = 7e-79, Method: Composition-based stats. Identities = 100/393 (25%), Positives = 172/393 (43%), Gaps = 18/393 (4%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLG+ F+ EHQ F+D LL +D ++++GDV+D+ P + + Sbjct: 17 MKILHTSDWHLGRTFHRSPLTREHQQFIDELLNYVHAEGIDTLLISGDVYDSTIPTAEST 76 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 TL ++ + L + G +++ +GNHDS L+ + S A + + DG Sbjct: 77 TLLDQALTRLMRAGVQVILSSGNHDSFRRLSYGAAFFEASGVHLRTSLEDATRPVELTDG 136 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 T + IP+L PR L +L A+TD + A+ RG+ II Sbjct: 137 TLRVHVYAIPYLAPR---LHATALGVDPTHHAVLGAVTDAIRTDAAE-RHARGEGADRII 192 Query: 181 ATGHLTTVGAS-------KSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGME 233 H T + +SD+ RDI +G +D PA F DY+ALGHIH+ + Sbjct: 193 VMSHATVSDTASSADTTPRSDSERDISVGGIDWVPASLFDGFDYVALGHIHKRYPV--TH 250 Query: 234 HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQL 293 +RY GSP+ SF E +L+ + G+ ++ M L+G + + Sbjct: 251 TIRYSGSPLGFSFSEEHNRNGAYLIELTPGEEPTISGHEWATRVHMKTLRGTMEQLLNSP 310 Query: 294 EQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQ 353 E E + IE+T + ++++ E+ + R ++ E+ +A Sbjct: 311 EH---TDYEHGYYCRIELTDETLPVGAVDRLRSRYET--ISHFSYRSTQPAAEKPVAVPL 365 Query: 354 RETLSELSVEEVFNRRLALEELDESQQQRLQHL 386 + + F++ + L ++ + L Sbjct: 366 TRDADPVETFDQFHQYVRNRPLTSEERDVITTL 398 >UniRef50_D2RLP4 Nuclease SbcCD, D subunit n=2 Tax=Acidaminococcus RepID=D2RLP4_ACIFE Length = 380 Score = 296 bits (758), Expect = 9e-79, Method: Composition-based stats. Identities = 103/399 (25%), Positives = 171/399 (42%), Gaps = 25/399 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR LHTSDWHLG+ F+ + +A LD +L+ A+ ++VDA++VAGDV+D PP+ A Sbjct: 1 MRFLHTSDWHLGRIFHGLHLLEDQRAALDQILDLAREYRVDALLVAGDVYDRAVPPTEAV 60 Query: 61 TLYNRFVVNL-QQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L + + L +++AGNHD+ LN + + A + A + D Sbjct: 61 NLLDETLRRLVLDLKIPALLIAGNHDNPDRLNFGQALFAARQLYITGPVDPAAHPVVLED 120 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 P+P+ P T +G + L + +Q + A K Sbjct: 121 ADGPVYFAPLPYCEPLTA-TELSGEKKPTHEAALQWQVETILRQIPSRARK--------- 170 Query: 180 IATGHLTTVGASKS-DAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYC 238 +A H+ GA + D+ R + G F Y ALGH+H Q +RYC Sbjct: 171 VALAHVFLTGARTTPDSERPLAAGGATTVSMDCFRDFHYTALGHLHACQ--NNSPRIRYC 228 Query: 239 GSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRD 298 GS + SF E + K VH+V SVE + + +AVLKG+ + Sbjct: 229 GSLLKYSFAEASQKKAVHIVDLDAKGDVSVETVPLTAPHELAVLKGEFRDLLENPR---- 284 Query: 299 VSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLS 358 + +L I++T + D + +++ + + L R + + A+ QR+ LS Sbjct: 285 -TDHLQDYLQIQLTDGVPILDAKHRLEQVYPQ--ILQLGYERLQPLEKEETATAQRKGLS 341 Query: 359 ELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGE 397 + + F R + +L E ++ LF ++ E Sbjct: 342 TDDLFQAFFREVQGRDLTEGEKA----LFHQIADEVSQE 376 >UniRef50_Q5P494 Exonuclease SbcD n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P494_AZOSE Length = 426 Score = 296 bits (757), Expect = 1e-78, Method: Composition-based stats. Identities = 122/397 (30%), Positives = 178/397 (44%), Gaps = 27/397 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR+LHTSDWHLGQ+ + R EHQ FLDWLL T + D +++AGDVFD +P + A+ Sbjct: 1 MRLLHTSDWHLGQSLHDFDRTYEHQQFLDWLLALIATERPDVLLIAGDVFDNANPSAGAQ 60 Query: 61 TLYNRFVVNLQQTGCH--LVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP------ 112 RF+ ++ H +V++AGNHDS L + + + VV P Sbjct: 61 HQLYRFLTAARERMPHLSIVIIAGNHDSPGRLEATSPFLELFDAAVVGHVHRRPDQSIDV 120 Query: 113 ----QILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADA 168 L R+GT A IPFLRP D+ G + LA + + Y++ A A Sbjct: 121 ERLVVPLKNREGTVAAWCLAIPFLRPGDVPRVDHEGEG--EHDAYLAGVAELYRRALAVA 178 Query: 169 CKLRGDQPLPIIATGHLTTVGASKSD-AVRDIYIGTLDAFPAQNFPPA-DYIALGHIHRA 226 R I+A GH S+ + R I +G +A PA F A Y+ALGH+H A Sbjct: 179 QSRRQPGQ-AIVAMGHCHMAHGKLSELSERRIVVGGAEALPAGIFDAAIAYVALGHLHLA 237 Query: 227 QIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDL 286 Q +GG +H+RY GSP+P+SF E V V + + + VP + + + Sbjct: 238 QAVGGRDHIRYSGSPLPMSFAELDYPHQVMCVELDGEAVAEIRPVRVPRSVELIRVPKTH 297 Query: 287 ASITAQLEQWR--------DVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLV 338 ASI L D +L++ + D ++ +I+A PV + + Sbjct: 298 ASIDEVLPLLEALDPGVAADGPAHAHPYLEVRVRLDAPEPGLRVRIEAALAGKPVRLARI 357 Query: 339 RRSREQRERVLASQQRE--TLSELSVEEVFNRRLALE 373 + R AS L L+ E VF R Sbjct: 358 DPASSPRGDAPASSAMSLGDLERLAPETVFARLCEQR 394 >UniRef50_A7VIT3 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VIT3_9CLOT Length = 385 Score = 295 bits (754), Expect = 2e-78, Method: Composition-based stats. Identities = 97/404 (24%), Positives = 176/404 (43%), Gaps = 27/404 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M++ H SD H+G+ + + D +L + Q DA+++AGD++D P + A Sbjct: 1 MKLFHLSDLHIGKIVNGYEMWEDQRYVFDQILAYVREEQPDAVMIAGDIYDKAVPSAKAV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 T ++ F+ L +G +++++GNHDS L+ + IM N + + G + +D Sbjct: 61 TEFDEFLTELADSGTIILIISGNHDSAERLDFASSIMKKQNIYMKGTYGGEAMKVTMQDK 120 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 +PF++P ++ + + L +++ T+ QQ A + D + Sbjct: 121 WGDVNFYLMPFVKPSNVKNTLSDLTEEPEKESAALTYTEAMQQAVAAM---QVDPGKRNV 177 Query: 181 ATGHLTTVGA---SKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRY 237 H + +SD+ I IG LD F DY+ALGH+H Q I G +RY Sbjct: 178 LIAHQNVTNSGVNRRSDSE-TISIGGLDNIDRTVFDIFDYVALGHLHSPQQI-GKPEIRY 235 Query: 238 CGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWR 297 CG+P+ S E K V +V S+ L + G L + R Sbjct: 236 CGTPVIYSMSEADDQKSVTVVELGEKGKLSIRELPLHQLHAWYNFTGTLDEAMS-----R 290 Query: 298 DVSQEPPVWLDIEITTDEYLHDIQRKIQALTESL-PVEVLLVRRSREQRERVLASQQRET 356 + +++ + I +T E + D+Q +++ + ++L VE + SR ++ER L E Sbjct: 291 EANED---YARIVLTDKETIIDVQARLRTVYKNLMSVEFQMADGSRPEQERTL-----ED 342 Query: 357 LSELSVEEVFN----RRLALEELDESQQQRLQHLFTTTLHTLAG 396 + L+ +E F R++ EL + ++ L G Sbjct: 343 VKNLAPDEAFADFYNRKMK-RELSDENAVYIRQLIRDYYEQRQG 385 >UniRef50_C4V2E2 Exonuclease SbcD n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V2E2_9FIRM Length = 381 Score = 295 bits (754), Expect = 3e-78, Method: Composition-based stats. Identities = 90/387 (23%), Positives = 160/387 (41%), Gaps = 18/387 (4%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR +HT+DWHLG+ F + + L+ LL + + DA+++AGDV+D PP A Sbjct: 1 MRFIHTADWHLGKLFGQRHMTEDQAYVLEELLALCRDVRPDALVLAGDVYDRAVPPPEAV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 L+N + L + G ++ +AGNHDS L ++ + + + D Sbjct: 61 ALFNTVLTRLAEQGIKVLCIAGNHDSAVRLAFGAQLLQSSGVYIAGTLDAEAAPVVLSDA 120 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 +P+ P I S + L I + Q + Sbjct: 121 FGDVYFSLLPYGDPPHIRESFSLDETPSFDTALDVQIAS---------SRAMIPQGARSV 171 Query: 181 ATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGS 240 A H +G S++ + +G D A F P +Y ALGH+H Q G E +RY GS Sbjct: 172 AVAHAFVIGGQTSESEHTLSVGGSDQVHADKFRPYNYTALGHLHAPQR-AGAEQIRYAGS 230 Query: 241 PIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVS 300 + SFDE + K V LV S + + +++G +A I + +++ +S Sbjct: 231 LLKYSFDESHQKKGVTLVDIDAAGAVSHTFYPLVPRHDVRIVRGKMAEIMS--DEFDPLS 288 Query: 301 QEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQ-RETLSE 359 E ++ +E+T + + K++ + P L+ R + + S+ Sbjct: 289 HED--YICVELTDTDAVLAAHEKLRRV---YPNLFLITRPNIHMGHSSNEVRNYERGKSD 343 Query: 360 LSVEEVFNRRLALEELDESQQQRLQHL 386 L + F + E++ + + + L H+ Sbjct: 344 LHLFADFYAEMTTEKMTQEETEELTHI 370 >UniRef50_C6R472 Exodeoxyribonuclease I subunit D n=1 Tax=Rothia mucilaginosa ATCC 25296 RepID=C6R472_9MICC Length = 398 Score = 294 bits (752), Expect = 5e-78, Method: Composition-based stats. Identities = 98/398 (24%), Positives = 175/398 (43%), Gaps = 23/398 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLG+ F+ EHQ F+D LL ++ ++++GDV+D+ P + + Sbjct: 1 MKILHTSDWHLGRTFHRSPLTREHQQFIDELLNYVHAEGINTLLISGDVYDSTIPTAEST 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 TL ++ + L + G +++ +GNHDS L+ + S A + DG Sbjct: 61 TLLDQALTRLMRAGVQVILSSGNHDSFRRLSYGAAFFEASGVYLRTSLEDATCPVELTDG 120 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 T + IP+L PR L Q +L +TD + + RG+ II Sbjct: 121 TLRVHVYAIPYLAPR---LHATALGVDPTHQAVLGTVTDAIRADAVE-RHARGEGADRII 176 Query: 181 ATGHLTT--------VGAS----KSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQI 228 H T G++ +SD+ RDI +G +D PA F DY+ALGHIH+ Sbjct: 177 VMSHATVSDTTGSDIAGSADTTPRSDSERDISVGGIDWVPASLFDGFDYVALGHIHKRYP 236 Query: 229 IGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLAS 288 + +RY GSP+ SF E +L+ + G+ ++ + M L+G + Sbjct: 237 V--THTIRYSGSPLGFSFSEEHNRNGAYLIELNPGEEPTISSHEWATRVHMKTLRGTMDQ 294 Query: 289 ITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERV 348 + E + E + IE+T + ++++ E+ + R ++ ++ Sbjct: 295 LLNSPE---NSPYEQGYYCRIELTDETLPVGAVDRLRSRYET--ISHFSYRSTQPATDKP 349 Query: 349 LASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHL 386 +A+ + + F++ + L ++ + L Sbjct: 350 VAAPLTRDADPVETFDQFHQYVRNRPLTSEERDVITTL 387 >UniRef50_UPI000178998B nuclease SbcCD, D subunit n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178998B Length = 394 Score = 293 bits (750), Expect = 7e-78, Method: Composition-based stats. Identities = 106/391 (27%), Positives = 178/391 (45%), Gaps = 19/391 (4%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHT DWHLG+ +SR AE + FLD L++ A Q D I++AGDV+D+ +PP+ A Sbjct: 1 MRILHTGDWHLGRTLEGRSRLAEQERFLDELVKLADDQQADLILMAGDVYDSVNPPASAE 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 L+ L + G +VV+AGNHD + ++A T++ + + Sbjct: 61 QLFYEAAARLTEGGRPMVVIAGNHDQPERVASVTPLVAARGITLIGTPIADAVTVATART 120 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLP-- 178 A + +P+ S+A LN + + Y + ++ + P Sbjct: 121 GETAKIAALPY-------PSEARLNELLSVDGDEDQLRRAYSERVGKLMRMMAREFSPQT 173 Query: 179 -IIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFP-PADYIALGHIHRAQIIGGMEHVR 236 +A H+ +G +SD+ R I +G A Y ALGH+HR+Q + G +R Sbjct: 174 VNLAMSHIYVLGGVESDSERPIQVGGAYTVDPSALAVGAAYTALGHLHRSQAVKGDGMIR 233 Query: 237 YCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQW 296 Y GSP+ SF E G++K V +V S G +E L + +P+ ++ ++ +W Sbjct: 234 YSGSPLAYSFSEAGQAKSVTMVDVSPGGSPVIEELFLSSGRPL--VRWKAKGGLDEVYRW 291 Query: 297 RDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRET 356 D ++P ++D+E++ E + IQ L +S ++ +R + E + +R Sbjct: 292 LDEGRDPEAFIDLEVSLTEAMG--LADIQRLRKSRD-GIVHIRPVYPEMEALELESERSR 348 Query: 357 LSELSVEEVFNRRLALEELDESQQQRLQHLF 387 L + F +R E L LF Sbjct: 349 LPLPDLFRKFYQRQTGGAEPED---HLVDLF 376 >UniRef50_Q1DDQ4 Nuclease SbcCD, D subunit n=3 Tax=Myxococcales RepID=Q1DDQ4_MYXXD Length = 414 Score = 293 bits (750), Expect = 7e-78, Method: Composition-based stats. Identities = 136/419 (32%), Positives = 196/419 (46%), Gaps = 29/419 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR+LHTSDWHLG Y SR+AEH AFLDWLLET + VDA++VAGD+FDT +P + A+ Sbjct: 1 MRLLHTSDWHLGHTLYDVSRDAEHAAFLDWLLETLEAQSVDALLVAGDIFDTANPSAEAQ 60 Query: 61 TLYNRFVVNLQQTGCH--LVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA------- 111 + +FV ++ +VV+ GNHDS A L+ + A L VV A Sbjct: 61 AAWYQFVAKARRRMPRLDVVVIGGNHDSAARLDAPDPLFAALGVHVVGGLPRARGAMDQE 120 Query: 112 --PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADAC 169 L G GA + +P+LRP D+ + L+ + Y + A A Sbjct: 121 RLLVPLHDAKGRVGAWVAAVPYLRPADLPPVPGDMG-----DRLVEGVRSVYAEVLAAAR 175 Query: 170 KLRGDQPLPIIATGHLTTVGASKSD-AVRDIYIGTLDAFPAQNFP-PADYIALGHIHRAQ 227 + R ++A GH G S + R I G A P FP Y ALGH+H+AQ Sbjct: 176 RRRQ-AGQALVAMGHCYMTGTELSALSERKILGGNQHALPVDLFPDDVAYAALGHLHKAQ 234 Query: 228 IIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLK---- 283 +GG E VRY GSP+PLS E G V LV L V++L VP T M + Sbjct: 235 RVGGREGVRYSGSPLPLSLSEAGYRHQVLLVELEGDALREVQSLPVPRTTDMVRVPSRDA 294 Query: 284 GDLASITAQLEQWR----DVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVR 339 L ++ QLE D + +L++ ++ +++K++ + E ++ + Sbjct: 295 APLDAVLTQLEGLPAHDADTLEWRRPYLEVCVSLPRPEPALRQKVEKVLEGKAARLVKLT 354 Query: 340 RSREQRERVLAS-QQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGE 397 + LA Q +L E + E+VF R A + +E L F T L + E Sbjct: 355 PAYTGTGGALAEVQPGLSLKERTPEDVFRARYA-RDFEEPPALALLEAFHTLLTDVQEE 412 >UniRef50_A9BEV6 Nuclease SbcCD, D subunit n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BEV6_PETMO Length = 374 Score = 293 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 90/390 (23%), Positives = 166/390 (42%), Gaps = 28/390 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ +HT+DWHLG+ YS + + LD L D +++AGD++D G PPS A Sbjct: 1 MKFVHTADWHLGKIIYSNYMTLDQKYILDNFLAYLSKTPPDVLLIAGDLYDRGIPPSEAV 60 Query: 61 TLYNRFVVNL-QQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L N + + ++++GNHDS L I++ +N + + + + D Sbjct: 61 NLLNEVLSKIVLGLKIPTLIISGNHDSDERLEFLNGILSNMNLHIEGTLKKEVKKITFND 120 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 +P++ + N +K Q L +HY D+ L D+ Sbjct: 121 EYGPVNFFMLPYVDSQKA-GDIFETNFEDKTQLL---------KHYLDSIDL--DEDERN 168 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCG 239 + H G S++ R + IG + F DY+ALGH+HR Q I ++ Y G Sbjct: 169 VLIAHEYIKGGLNSESERPLTIGGSEYVDPDIFEKFDYVALGHLHRPQKIK---NIYYSG 225 Query: 240 SPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDV 299 S + SF E K ++LV VE L+ + M +++G I Sbjct: 226 SLLKYSFSEADHIKGMNLVEMKEKGNIKVEKLSFKTAKDMKIIRGSFDDIMKM------- 278 Query: 300 SQEPPVWLDIEITTDEYLHDIQRKIQALTES-LPVEVLLVRRSREQRERVLASQQRETLS 358 + +L I + + ++D K++A + L ++ ++ + E + R +S Sbjct: 279 -ESSEDYLQIILENTKPVYDAINKLRAKFPNVLSLDFPNLKTNDEIKTRDYNI---RKIS 334 Query: 359 ELSVEEVFNRRLALEELDESQQQRLQHLFT 388 + + ++F + + +EL ++Q + +F Sbjct: 335 PVDLFKLFYQEVKNQELSFEEKQIVTSIFN 364 >UniRef50_A7HCA1 Nuclease SbcCD, D subunit n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HCA1_ANADF Length = 386 Score = 290 bits (742), Expect = 7e-77, Method: Composition-based stats. Identities = 102/401 (25%), Positives = 174/401 (43%), Gaps = 24/401 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 +RILHTSDWHLG+ + +S + L+ L E + + DA+++AGDVFD PP+ A Sbjct: 8 LRILHTSDWHLGRALHEESLLEDQAWALERLREVLREARPDALLIAGDVFDRAVPPAEAV 67 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 +L + F+ + G LV +AGNHDS L ++ + + + + + Sbjct: 68 SLLDDFLNQVAALGVPLVAIAGNHDSAERLAFGARLVEARGVHLRGTHARSAEPVEI--- 124 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 + P+P+L P + G G E + AA + ADA +PLP + Sbjct: 125 PGKGFIYPVPYLDPEVVR----GAEGDETLRGHAAATERVLVRVRADAAA----RPLPTV 176 Query: 181 ATGHLTTVGASKS-DAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCG 239 H GA++S D+ R + +G PA DY+ALGH+H Q + +RY G Sbjct: 177 LVAHAFVQGAAESPDSERPLAVGGSACVPAAALAGFDYVALGHLHAPQEV--APGMRYSG 234 Query: 240 SPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDV 299 S + SF E G K V L G +E + + + + L+G L + + RD+ Sbjct: 235 SLLKYSFGEAGHEKGVVLAEVERG-ATRIERVPLGARRDVVRLEGTLDELL----RRRDL 289 Query: 300 SQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSE 359 + +++ + + Y+ D + ++QA + + VL + + Sbjct: 290 APFERALVEVTLADEGYVFDAKNRLQARFAHV-LNVLRKDLEGGGDGTFASRVDGAGGDD 348 Query: 360 LSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHEA 400 L + E F +A ++ +F L +A + A Sbjct: 349 LKLFEAFFETVAGATPGPEHRE----VFAGALAEIARKERA 385 >UniRef50_A6KXN3 Putative exonuclease n=5 Tax=Bacteroides RepID=A6KXN3_BACV8 Length = 400 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 108/413 (26%), Positives = 191/413 (46%), Gaps = 40/413 (9%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHT+DWHLGQ FY R EH FL+WL + + H++D +++AGDVFD+ +P + ++ Sbjct: 1 MKILHTADWHLGQTFYEYDRREEHLHFLEWLKQQIRQHEIDVLLIAGDVFDSPNPSAESQ 60 Query: 61 TLYNRFVVNL--QQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ----- 113 +Y RF+ + + ++++AGNHDS A L ++ +N TV + Sbjct: 61 RMYYRFLREVTSENPSLQIIIIAGNHDSAARLEAPNPLLENMNVTVRGVVRRNAEGDIDL 120 Query: 114 ----ILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADAC 169 + +G A +P+LR D +++ G+ Q Y Sbjct: 121 QHLIVPLYTEGEVTAYCLAVPYLRQGDYPSAENYSKGV--------------QLLYEQLF 166 Query: 170 KLRGDQPLPIIATGHLTTVGASKSD---AVRDIYIGTLDAFPAQNFPPA-DYIALGHIHR 225 ++ LP+IA GHL G+ S+ + R + IG L+ F A Y ALGH+HR Sbjct: 167 NEVKEKGLPVIAMGHLQATGSEISEDDRSERTV-IGGLECVSPDAFDEAIAYTALGHLHR 225 Query: 226 AQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGD 285 +Q + E+VRY G+P+P+SF E + V ++T S +E L + + Sbjct: 226 SQRVSHRENVRYSGTPMPMSFAERNNASGVVMITISAEG-TGIERLAFEPLAGVMSIPRQ 284 Query: 286 LASITAQLEQWRDVSQEP----PVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRS 341 + L+ D+ +L+I+I E + KI+ + V + + Sbjct: 285 ARPLEEVLQAIGDLPDGDVTLRSPYLEIKILMTEPEPSYKYKIEEALKGKAVRLARIAAM 344 Query: 342 REQRER----VLASQQRETLSELSVE-EVFNRRLALEELDESQQQRLQHLFTT 389 Q++ + ++ +T+ L + +VF R+ E+ ++ +Q L+ + Sbjct: 345 LPQKKASGIVATSYEELQTIRPLDMALDVFKRKYGGTEMPDTMKQLLESVIKE 397 >UniRef50_A3WLK0 Exonuclease SbcD, putative n=1 Tax=Idiomarina baltica OS145 RepID=A3WLK0_9GAMM Length = 382 Score = 288 bits (736), Expect = 3e-76, Method: Composition-based stats. Identities = 95/394 (24%), Positives = 174/394 (44%), Gaps = 17/394 (4%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLG+ F+ +S + L ++E VDA+I+AGD++D PPS A Sbjct: 1 MKILHTSDWHLGRLFHQQSLLEQQIELLQQIVEIIDQQAVDAVIIAGDIYDRSVPPSAAI 60 Query: 61 TLYNRFVVNLQ-QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 + +N F+ + ++ ++GNHD L + ++ N +V A + + D Sbjct: 61 SAFNDFIEEVAVSRQKTIIAISGNHDGAERLGFATSLLKQSNLHLVTELPQALEPIVLND 120 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 + +PF P + H Q D + Sbjct: 121 SATTIDIWCVPFHDPLQVNNWLDTDCKEFNTAH----------QMIVDRINAERNPAHLN 170 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCG 239 + H GAS+S++ R + IG D Q F DY ALGH+H+ Q GMEH+RY G Sbjct: 171 MIVSHCYLDGASESESERPLSIGGADRVDWQLFKDFDYAALGHLHQPQH-KGMEHIRYSG 229 Query: 240 SPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDV 299 S + SF E +SK + L+ + +++++ +++ ++ M VLKG LA + AQ E Sbjct: 230 SLMKYSFSEVNQSKSITLLDVNEKGVQNIQQISLKPSRDMRVLKGTLAELIAQAEH---- 285 Query: 300 SQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSE 359 + ++ +T + + K++A +L +++ + ++ + Q++ ++ Sbjct: 286 DPQRNDFIQAILTDKQAILYPMAKLRAHYPNL-MQLRKEQLEHIRKASDTSGQEQLKKAD 344 Query: 360 LSVEEVFNRRLALEELDESQQQRLQHLFTTTLHT 393 + F + L+ Q+ + + Sbjct: 345 SELIHDFFTEVYGTPLNADQKASINQVIQQIEQE 378 >UniRef50_C5CAA0 Exodeoxyribonuclease I subunit D n=4 Tax=Micrococcaceae RepID=C5CAA0_MICLC Length = 407 Score = 287 bits (735), Expect = 4e-76, Method: Composition-based stats. Identities = 119/409 (29%), Positives = 181/409 (44%), Gaps = 34/409 (8%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M +LHTSDWHLG++F+ + LD L+ T VDA+++AGDV+D PP+ A Sbjct: 1 MILLHTSDWHLGRSFHGTGLLEAQEEVLDALVATVTERGVDAVLLAGDVYDRALPPADAV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQIL----P 116 L +R + L G +V+ +GNHDS L +++A V A A + + P Sbjct: 61 RLLDRTLTRLHAAGAQVVLTSGNHDSAVRLGFGGELLAAAGVHVRADAAELDRPVLLPEP 120 Query: 117 RRDGTPG--AVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGD 174 DG G + IP+L PR + H A +T+ ++ +AD R + Sbjct: 121 GVDGGAGQTVAVYGIPYLEPRH------QGPAWGVEPHHTAVLTEAVRRVHADLAARRAE 174 Query: 175 QPLPI--IATGHLTTVGASKSDAVRDI--------------YIGTLDAFPAQNFPPADYI 218 P P+ + HL G S++ RDI +GTL P F DY Sbjct: 175 TPGPVAGVVLAHLFAAGGHGSESERDIGEGEHVEPDAPPEMLVGTLGQVPVSVFEGLDYA 234 Query: 219 ALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQP 278 ALGH+H Q + EHVRY GSP+P SF E G K LV + G + VE ++ + Sbjct: 235 ALGHLHGRQRL--AEHVRYSGSPLPYSFSEAGHRKGGWLVHVTGGAVTGVEAVDWDAGRR 292 Query: 279 MAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLV 338 +AVL G + + E + W+ + +T DE +++ S+ V Sbjct: 293 LAVLSGPIEDLLESPE----FAWAEQCWVQVTVTDDERPERALERLKTRFPSVLVFRHEP 348 Query: 339 RRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLF 387 R RER A R+ S+ ++ F + E++Q L+ Sbjct: 349 AGGRRARERTYAQVLRQAPSDHALAVGFVDHVRQRPASEAEQDLLRDAL 397 >UniRef50_C8WRD7 Nuclease SbcCD, D subunit n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WRD7_ALIAD Length = 425 Score = 287 bits (734), Expect = 5e-76, Method: Composition-based stats. Identities = 106/417 (25%), Positives = 177/417 (42%), Gaps = 27/417 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHT+DWH G+ + R E F++ L VD +++AGDV+ T +P + A Sbjct: 1 MRILHTADWHFGKTLEGRDRAPEQWKFIEELAAICDAESVDLVLMAGDVYQTVNPSAEAE 60 Query: 61 TLYNRFVVNLQQTGCH-LVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILP-RR 118 ++ + L G +V++AGNHD + R + L +V + RR Sbjct: 61 EMFYHALHRLAAGGRRGVVIIAGNHDHADRIRAPRWLADPLGIVLVGLPKDEIRPTEARR 120 Query: 119 D------GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDY-YQQHYAD---- 167 D G GAV +P R I + + + L ++ + ++ Y+D Sbjct: 121 DGAWRPWGGVGAVELAVPSCPHRARIAAVPYPSESRLGEVLSESLEEREMRRSYSDRLAG 180 Query: 168 ---ACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPP-ADYIALGHI 223 + H+ G ++D+ I +G A A FP A Y+ALGH+ Sbjct: 181 WFAVLARHFRPDTVNLLASHVYVAGGIETDSEIQIQVGGAYAVDASAFPATAQYVALGHL 240 Query: 224 HRAQIIGGME--HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAV 281 HR Q + G +RY GSPI SF E G+ K V LV G+ + + +P+ Sbjct: 241 HRPQEMEGPGGVPIRYAGSPIAYSFSEAGQQKSVTLVDVEPGQRARWWEIPLSCGRPLVR 300 Query: 282 LKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRS 341 + AS A++ W D ++ W+D+E+ D + R IQ L + P ++ +R Sbjct: 301 WR---ASSLAEVHAWLDEGRDADAWIDLEVRVDTEM--ALRDIQDLRGAAP-HIVHIRPV 354 Query: 342 REQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEH 398 +E + + + +S E +F R E++ L LF + + + Sbjct: 355 LPMQEAAESLDAQVS-RPISPEALFRRFFE-EKVGLPPDDALVRLFLGLVQDVETDE 409 >UniRef50_B7AP64 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AP64_9BACE Length = 399 Score = 286 bits (732), Expect = 9e-76, Method: Composition-based stats. Identities = 95/399 (23%), Positives = 177/399 (44%), Gaps = 22/399 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR H SD H+G+ + +S + + L ++E + + DA+I+AGDV+D P + A Sbjct: 7 MRFFHMSDLHIGKQLHERSLLDDQRHVLTRVVEYVREYSPDAVIIAGDVYDKSLPSAEAV 66 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVA----SAGHAPQILP 116 T+++ F+VNL TG +++++GNHDS LN I N V ++G + + Sbjct: 67 TVFDDFIVNLADTGTTVMLISGNHDSAERLNYGSRIFTKSNIHVAGMPPRNSGDHLKSVV 126 Query: 117 RRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLL-AAITDYYQQHYADACKLRGDQ 175 +D +PF++P + A N + + + Y +A + D Sbjct: 127 LKDEYGEVTFWLMPFIKPGYVKGVFADENAVGASTDAVGDCCSSYDSAVHAVIARENIDY 186 Query: 176 PLPIIATGHLTTVGA----SKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG 231 + H S++D+ I +G +D DY ALGHIHR Q + G Sbjct: 187 SERNVIVSHQFYTNGQTQPSRTDSE-TISVGGIDNVDVSAVKDFDYAALGHIHRGQKV-G 244 Query: 232 MEHVRYCGSPIPLSFDECGKSKYVHLVTF-SNGKLESVENLNVPVTQPMAVLKGDLASIT 290 ++VRYCG+ + S E +K + +V GK + L + + ++KG I Sbjct: 245 YDYVRYCGTMLKYSVSEREDNKALLMVDMKEKGKPAEITELKLDALHDVRLIKGKFDEIV 304 Query: 291 AQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLA 350 Q + ++ + +T + +++ ++ + + +L + V SR RE V Sbjct: 305 RQY-----SDKNTNDYVSVVLTDENEVYNARQTLIDIFPNL--LSVSVDNSRTNREYVEE 357 Query: 351 SQQ-RETLSELSVEEVFNRRLALEELDESQQQRLQHLFT 388 +L EL E F RR+ ++ + +++ ++ + Sbjct: 358 YDDVNVSLDELFAE--FFRRMQGRDMSDDERRAMEDVIN 394 >UniRef50_A1SK69 Exodeoxyribonuclease I subunit D n=2 Tax=Actinomycetales RepID=A1SK69_NOCSJ Length = 386 Score = 286 bits (732), Expect = 9e-76, Method: Composition-based stats. Identities = 99/386 (25%), Positives = 163/386 (42%), Gaps = 18/386 (4%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHTSDWHLG++F+ + A++D LLE + +VD ++VAGDV+D P A Sbjct: 1 MRILHTSDWHLGRSFHREGMLGHQAAYVDHLLEVVERERVDLVVVAGDVYDRALPHVDAV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 L + + L + +V+ +GNHDS L S ++ + AG + D Sbjct: 61 RLADETLARLAASRAKVVLTSGNHDSAQRLGFSSRLIDAAGVFIRTDAGGVGTPVLLEDE 120 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 + +P+L P + + AA+T+ ++ AD +P + Sbjct: 121 HGPVAVYGLPYLDPDAVREPWGLPGRSHE-----AALTEAMRRVRADLAS----RPARSV 171 Query: 181 ATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGS 240 H GA SD+ RDI +G + P F DY ALGH+H + + VRY GS Sbjct: 172 VLAHAFVAGAQPSDSERDISVGGVSLVPTSVFDGVDYTALGHLHGRHTL--TDTVRYSGS 229 Query: 241 PIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVS 300 P+ SF E + K LV + + PV +P+A L+G L + L ++ Sbjct: 230 PLAYSFSEATQVKGSWLVDLGADGVRECTFVEAPVPRPLARLRGTLDDLLHDL----TIT 285 Query: 301 QEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSEL 360 W+ +T D +++ P +++ R + + +RE S+ Sbjct: 286 VHEDAWVQATLTDDVRPLQAMERLRR---RFPHTLVIGFEPRGGAPTAVPAARREGRSDH 342 Query: 361 SVEEVFNRRLALEELDESQQQRLQHL 386 +V F + ++ L Sbjct: 343 AVALDFIADMRGAPATRAEAALLHEA 368 >UniRef50_B3CEC9 Putative uncharacterized protein n=4 Tax=Bacteroides RepID=B3CEC9_9BACE Length = 405 Score = 286 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 94/409 (22%), Positives = 177/409 (43%), Gaps = 30/409 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLG Y+ R E QAFL L + DA++V+GD++ +P + + Sbjct: 1 MKILHTSDWHLGHTLYNYDRSREQQAFLKQLTRIVAEEKPDAMVVSGDIYHYSTPSASTQ 60 Query: 61 TLYNRFVVNLQQT--GCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA------- 111 +Y ++ + + G +VV AGNHDS + L + VV + Sbjct: 61 KMYTDGMLEIHRACPGMTIVVTAGNHDSSSKLEIDSSLWNHFGVKVVGNIERNQEEVNLE 120 Query: 112 --PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADAC 169 + G + +P + P++ E+Q A+ D ++ A+ Sbjct: 121 KHIVEVKDERGILKGYIIAVPHVYPQNFPILDTETPREERQTRFFQALQDEVEKMNAE-- 178 Query: 170 KLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNF-PPADYIALGHIHRAQI 228 LP++ HL+ G+ ++ D +G ++ P DY+ALGHIH Q Sbjct: 179 ------KLPVVLMAHLSIEGSDQTG--HDETVGGIEYVPINAMGGGYDYLALGHIHCPQN 230 Query: 229 IGGMEH-VRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLA 287 I G H RYCG+P+P+SFDE V +V K ++ + + P+ L + Sbjct: 231 IKGSRHCARYCGTPLPVSFDEA-YPHSVSIVEIQREKAPQIKTIEIENPMPLITLPKEAV 289 Query: 288 SITAQLEQWRDVSQEPPVWLDIEITTDEYL-HDIQRKIQALTESLPVEVLLVRRSREQ-- 344 ++Q + + P ++ + + +YL D + + + ++ +RE+ Sbjct: 290 DFEEAIKQLEEYPDDKPAYIRLNVLIKDYLAPDCNERASNAVKGKNCKFCYIKPNREKHT 349 Query: 345 ---RERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTT 390 + ++ Q+ + +S L + +++ + +E+DE + + + Sbjct: 350 SDDETKHISIQEMQEMSPLEIAKLYFQEAEGKEMDEELCELMNSVVQKV 398 >UniRef50_Q6GH61 Nuclease sbcCD subunit D n=52 Tax=Staphylococcus aureus RepID=SBCD_STAAR Length = 373 Score = 285 bits (730), Expect = 1e-75, Method: Composition-based stats. Identities = 83/392 (21%), Positives = 161/392 (41%), Gaps = 24/392 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+I+HT+DWHLG+ K + LD +E + + D I++AGD++DT P A Sbjct: 1 MKIIHTADWHLGKILNGKQLLEDQAYILDMFVEKMKEEEPDIIVIAGDLYDTTYPSKDAI 60 Query: 61 TLYNRFVVNLQ-QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L + + L + +++++GNHD LN + + Sbjct: 61 MLLEQAIGKLNLELRIPIIMISGNHDGKERLNYGASWFENNQLFIRTDFTSINSPIEIN- 119 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 G +P+ ++ QQ + I + D+ Sbjct: 120 ---GVNFYTLPYATVSEMKHYFEDDTIETHQQGITRCIETIAPEI---------DEGAIN 167 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCG 239 I HLT G SD+ R + IGT+++ F DY+ LGH+H I + ++Y G Sbjct: 168 ILISHLTVQGGKTSDSERPLTIGTVESVQKGVFDIFDYVMLGHLHHPFSIED-DKIKYSG 226 Query: 240 SPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDV 299 S + SF E G++K VT ++G + V + + + + ++ G+ + + + Sbjct: 227 SLLQYSFSEAGQAKGYRRVTINDGIINDVF-IPLKPLRQLEIISGEYNDVINE----KVH 281 Query: 300 SQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSE 359 + +L ++ + I + +L + P + L + E A + E + Sbjct: 282 VKNKDNYLHFKLKN---MSHITDPMMSLKQIYPNTLALTNETFSYNEENNAIEISEK-DD 337 Query: 360 LSVEEVFNRRLALEELDESQQQRLQHLFTTTL 391 +S+ E+F + +EL + Q +++++ L Sbjct: 338 MSIIEMFYNHITDKELSDIQSNKIKNILENEL 369 >UniRef50_A7VZC9 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VZC9_9CLOT Length = 384 Score = 285 bits (728), Expect = 3e-75, Method: Composition-based stats. Identities = 91/409 (22%), Positives = 159/409 (38%), Gaps = 36/409 (8%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDW-LLETAQTHQVDAIIVAGDVFDTGSPPSYA 59 M+ +HTSDWHLG+ Y +S + + F+ L Q D +I+AGD++D P A Sbjct: 1 MKFIHTSDWHLGKMIYGRSLLEDQEYFIKQVFLPAVDREQPDFVILAGDIYDRQIAPVEA 60 Query: 60 RTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L++ V + +++GNHD L ++ + A A + + Sbjct: 61 IRLFDWTVSEMAGREVPFFLISGNHDGADRLCVGARLLRKSGIYLTARLEDAFEPILLEK 120 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 + +P+ P + + ++ Y+ + + R D LP Sbjct: 121 NGESVQIFLLPYFEPAEARDVLG--------DDSIRGFSEAYEAVLSRLEEKR-DPALPS 171 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCG 239 + H G++ SD+ +Y+G A F Y ALGH+H Q G + Y G Sbjct: 172 VLVSHCFVAGSTASDSESTLYVGGSGEVGAGCFRNFTYAALGHLHGPQKAGA--NGWYSG 229 Query: 240 SPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDV 299 SP+ SFDE + K +VT G + V +PM +TA +Q + Sbjct: 230 SPLCYSFDEEKQKKGCTVVTLK-GYETDCRQVPVVPMRPMRT-------LTAAFDQLMEE 281 Query: 300 SQEPPV--WLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETL 357 ++ P ++ + +T D+ + + L E P + L + + + +++ Sbjct: 282 GKKSPCQDYVFLTLTDDKP---VYMPVDQLREYYPNLLGLTSQWLQNGGLEGLTGEQQEK 338 Query: 358 SEL----SVEEVFNRRLA---LEELDESQQQRLQHLFTTTLHTLAGEHE 399 EL +E+F+ L E Q LF L + E E Sbjct: 339 RELLKRGGEKEIFSAFLTSVCQSGATEEDQA----LFDQILAQVGREAE 383 >UniRef50_C2EEA5 Exonuclease n=1 Tax=Lactobacillus ruminis ATCC 25644 RepID=C2EEA5_9LACO Length = 375 Score = 285 bits (728), Expect = 3e-75, Method: Composition-based stats. Identities = 87/391 (22%), Positives = 163/391 (41%), Gaps = 24/391 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ LHT+DWH+G+ + E L L + A +VDAI++AGD++D G P + Sbjct: 1 MKFLHTADWHVGRKLHGYDLSTEQADALRKLEKIAIDEKVDAIVIAGDIYDRGMPSEDSV 60 Query: 61 TLYNRFVVNLQ-QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 + N + L + G L+ ++GNHDS L+ + + + A + + Sbjct: 61 RMVNGALKKLNLEDGFPLLAISGNHDSAERLSTGSEWFEATSFYLHTKLERAAEPIEM-- 118 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 G +P+ + G ++ + I ++ + D K Sbjct: 119 --SGVQFFLMPYFEISAAK-NFLGDETLKTADQCVRRIVSLMKERFKDGFKH-------- 167 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCG 239 + GH VG+ KSD+ +G L+A DY+ALGH+H+ + E V+Y G Sbjct: 168 VLVGHFFAVGSLKSDSETPSEVGGLEAVGIDELECFDYVALGHLHQHRA-SKSEKVKYSG 226 Query: 240 SPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDV 299 S + S E K V++V + E + + + V+KG ++ + E +R + Sbjct: 227 SLLKYSVSETSDQKGVYVVDTDS---EIIAYKPLEPLNDVRVVKGLFENLI-KPENYRQI 282 Query: 300 SQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSE 359 + ++ +E+ + D+ + L + P + L R + + E LSE Sbjct: 283 PDDD--YVAVELEDRVPIIDVMNR---LKKYYPRIIELKRVNGRVNHENNGVKNLEKLSE 337 Query: 360 LSVEEVFNRRLALEELDESQQQRLQHLFTTT 390 + + + F + E+ DE Q + ++ Sbjct: 338 MDLFKTFYKDTVGEDPDEEQCKMMEQALQDV 368 >UniRef50_C7MH54 Exodeoxyribonuclease I subunit D n=3 Tax=Micrococcineae RepID=C7MH54_BRAFD Length = 387 Score = 283 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 99/390 (25%), Positives = 155/390 (39%), Gaps = 16/390 (4%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLG+ + AFLDWL+E + +VD +++ GDV+D P + Sbjct: 1 MKILHTSDWHLGRTLHKVDLHEHQAAFLDWLVELVRAEEVDVVVIPGDVYDRAVPAVTSV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 TL + + L TG +V+ +GNHDS L R +M ++ + D Sbjct: 61 TLLDSALARLADTGATVVLTSGNHDSAERLGFGRSLM-RSGVHLLTDVPGIEHPVTVADE 119 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 + +P+L P T + A + A A G + + Sbjct: 120 HGEVLFFGLPYLEPDRARTELVAEGEAPLARSHEAVTRAALDRVRARAEHRPGART---V 176 Query: 181 ATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGM--EHVRYC 238 H G SD+ RD+ +G +D+ PA DY+ALGH+H Q + Y Sbjct: 177 VLAHTFVTGGEGSDSERDLSVGGVDSVPAGVLGGIDYLALGHLHGCQDLSRAVGAPAWYS 236 Query: 239 GSPIPLSFDECGKSKYVHLVTFS-NGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWR 297 GSP+ SF E K V +V G V + PV + + L+G LA + AQ + Sbjct: 237 GSPLAFSFSERHHRKSVLMVELGAPGTEVEVRRIETPVPRRLTELRGTLAQLLAQRD--- 293 Query: 298 DVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETL 357 W+ +T +Q + L E+ P +L + R R Sbjct: 294 ---GHAGDWVKAVVTDPARPAHLQ---EQLREAFPHLLLTEYAPEGREAREGTPVVRREQ 347 Query: 358 SELSVEEVFNRRLALEELDESQQQRLQHLF 387 + L V + F + ++ L + Sbjct: 348 NPLEVMDEFLAHVTGAAPTAAEHDVLDRAY 377 >UniRef50_B1YES6 Nuclease SbcCD, D subunit n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YES6_EXIS2 Length = 373 Score = 282 bits (722), Expect = 1e-74, Method: Composition-based stats. Identities = 91/399 (22%), Positives = 163/399 (40%), Gaps = 28/399 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ +HT+DWHLG+ + +S +A L L Q DA+I+AGD++D PP+ A Sbjct: 1 MKWIHTADWHLGKIVHGESMLDNQRAVLQEFLRLLDREQPDAVIIAGDLYDRAVPPTEAV 60 Query: 61 TLYNRFVVNL-QQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L + + ++ + +V ++GNHDS L+ ++ + + + + Sbjct: 61 ELLDTVLADIVLERKIPVVAISGNHDSAERLSFGTTLLQRAGLHLAGKLTDTIEPVEIK- 119 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 G P+PF P + I + I + P Sbjct: 120 ---GVRFYPVPFADPATVRYIHQDET-IRTHDDAMRKIISKMELE------------GPS 163 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCG 239 + GH +G ++D+ R + +GT A +F P Y ALGH+H I E +RY G Sbjct: 164 VLVGHAFVIGGLETDSERQLSVGTAGQVSASSFAPFTYTALGHLHNPLAIKS-ETIRYSG 222 Query: 240 SPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDV 299 S + SF E K V ++T ++G + + + L G LA +TA Sbjct: 223 SLLKYSFSEASHVKGVDILTLNDGGTFDRRFEPLTAKRDLRELTGSLAELTAPAFV---A 279 Query: 300 SQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQ-RETLS 358 +Q ++ I +T E L D K++ L + +L + R+ RE A Q R+ + Sbjct: 280 TQATDDYIKINLTDAEALIDPMGKLKKLYPN----ILHLERTGFTRESTRAVQASRDQVQ 335 Query: 359 ELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGE 397 ++ ++F ++ +Q + + + Sbjct: 336 AATLTDLFREFYEAVR-EKQPTDAMQTVLEEEAACVQND 373 >UniRef50_A6LCR3 Putative exonuclease n=6 Tax=Bacteroidales RepID=A6LCR3_PARD8 Length = 416 Score = 282 bits (721), Expect = 1e-74, Method: Composition-based stats. Identities = 124/426 (29%), Positives = 191/426 (44%), Gaps = 44/426 (10%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 ++++HT+DWHLGQ F+ REAEH+AFL +L + D +++AGDVFD +P + A+ Sbjct: 3 LKLIHTADWHLGQTFFGYDREAEHEAFLGFLTNLLVERETDVLLIAGDVFDVTNPSAGAQ 62 Query: 61 TLYNRFVVNLQQ--TGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA------- 111 + RF+ + G +V++AGNHDS L ++ LNT++V G Sbjct: 63 RRFYRFLREANRLNPGLQIVIIAGNHDSAIRLEAPNPLLEELNTSIVGIVGRTDSGEIDL 122 Query: 112 ---PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADA 168 L R G A+ +PFLR D + G + +A I Y++ YA A Sbjct: 123 ASLVVPLRNRAGEREALCLAVPFLRQGDYPAAPEG-----ELDSYVAGIGRMYRRLYAYA 177 Query: 169 CKLRGDQPLPIIATGHLTTVGASKSD---AVRDIYIGTLDAFPAQNFP-PADYIALGHIH 224 R + I+A GHL GA SD + R I G L++ A F Y ALGHIH Sbjct: 178 DAQR-NPGEAIVALGHLHATGAELSDDDRSERAIM-GGLESVSADTFDAGIAYTALGHIH 235 Query: 225 RAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKG 284 +AQ IGG E VRY GSP+P+SF E V V G + +E + +P + + Sbjct: 236 KAQRIGGREAVRYAGSPLPMSFSEKNYRHQVIAVEIEEGSVTEIEAIGIPRVADLMRIPD 295 Query: 285 D----------LASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVE 334 LA + E D S+ P +L+I + E + +++ V Sbjct: 296 SPLPPKEVLRCLAGLPEPEEGREDESRWP--YLEIRVLLTEPDPTFRHRVEEALVGKAVR 353 Query: 335 VLLV-----RRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTT 389 + + RR E ER L+ + ++ L + R + ++ LF Sbjct: 354 LTSIVPSYPRREGEAEERALSYNDLQKIAPLDML----RHTFAARYGGELPEEIETLFNE 409 Query: 390 TLHTLA 395 + +A Sbjct: 410 VIREVA 415 >UniRef50_P23479 Nuclease sbcCD subunit D n=16 Tax=Bacillales RepID=SBCD_BACSU Length = 391 Score = 282 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 104/403 (25%), Positives = 180/403 (44%), Gaps = 21/403 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHT+DWHLG+ +SR +E LD L + Q+DAI++AGD FDT +PP+ A Sbjct: 1 MRILHTADWHLGKTLEGRSRLSEQADVLDELNTIVKDEQIDAIVMAGDAFDTVNPPALAE 60 Query: 61 TLYNRFVVNLQQTGC-HLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L+ + L G +VV+AGNHD+ L+ + + ++ P + Sbjct: 61 QLFYESLSALSDRGKRPIVVIAGNHDNPDRLSAASPLTHENGIHLIGYPTTEPIHIEVPS 120 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQ---P 176 + + + S+A LN + + D+Y A + + Sbjct: 121 AGELLAVGALAY-------PSEARLNEVLSDTFDEKLLRDHYDVKIRQAFEHMTSRFRTD 173 Query: 177 LPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFP-PADYIALGHIHRAQIIG-GMEH 234 IA H+ G +++D+ R I +G A++ P A Y+ALGH+HR Q I Sbjct: 174 AVKIAASHIYVAGGNQTDSERPIEVGGAYTVAAESLPADAAYVALGHLHRPQTIKRARTL 233 Query: 235 VRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLE 294 RY GSP+ SF E G +K V +V G+ + + + + +P+ +K A+ +++ Sbjct: 234 ARYSGSPLAYSFSEAGYAKSVTIVDAKPGEEATWQEVLLSSGKPL--VKWKAANGLSEVY 291 Query: 295 QWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQR 354 W D ++ W+D+EI + L +I L ++ P + + R E ++R Sbjct: 292 SWLDEGRDQNAWIDLEIRVADQLS--LEEIHRLRKAHPGFIHI----RPVFEEQNKDRER 345 Query: 355 ETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGE 397 + +S+E+ F + + + + LF + E Sbjct: 346 IEVKHVSIEDRFKKFYEKQTGGAVPDEEMVKLFLELASGVEEE 388 >UniRef50_A8U5M2 Exonuclease sbcD n=1 Tax=Carnobacterium sp. AT7 RepID=A8U5M2_9LACT Length = 376 Score = 282 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 96/398 (24%), Positives = 179/398 (44%), Gaps = 36/398 (9%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR+LHT+DWH+G+ S + FLD L+E +T +VDA+I+AGD++D P A Sbjct: 1 MRLLHTADWHIGKIVNELSMLEDQDYFLDQLIEKLKTVKVDAVIMAGDLYDRAMPSKEAV 60 Query: 61 TLYNRFVVNL-QQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L N+ + L Q+ ++V+AGNHDS + D++A + + + + + Sbjct: 61 ALANKVLTRLVQEVNVPVLVIAGNHDSNERVEYGADLLATNQLYIEGTVKEKTRKVTIK- 119 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 G +PF I Q + ++ D + +A K D Sbjct: 120 ---GVNFYLMPFADYAYIRELL--------QDESIKSLEDA-ARVQIEAIKKEMDPTEIN 167 Query: 180 IATGHLTTVG-----ASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEH 234 + H + + +D+ R + IGT + + F DY+ALGH+H+AQ + + Sbjct: 168 VLIAHGYVINLSNDTSETTDSERPLSIGTAEYVSVELFEAFDYVALGHLHKAQKVK-HDR 226 Query: 235 VRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLE 294 +RY GS + S E K + LVT +E +E + + + M V+KG +I Sbjct: 227 IRYSGSIMKYSKSEAVHKKQLSLVTLEKNHVE-IEPIYIQPKRDMRVIKGLFDNIME--- 282 Query: 295 QWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQR 354 Q+ ++ E+ + ++ D +++ P + L ++++RE ++ + Sbjct: 283 ------QKSEDYVFFELLDENFVMDAMNQLRR---RYPNAMGLEYTAKKEREESSSAMHQ 333 Query: 355 ETLSELSVEEVFNR---RLALEELDESQQQRLQHLFTT 389 E L +LS++++F +EL +++ + L Sbjct: 334 EQLKKLSIQDIFADFYAHYKEKELTTERKEIIDSLLHQ 371 >UniRef50_C4L7Q3 Nuclease SbcCD, D subunit n=9 Tax=Gammaproteobacteria RepID=C4L7Q3_TOLAT Length = 411 Score = 282 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 113/416 (27%), Positives = 188/416 (45%), Gaps = 26/416 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M++LHT+DWHLG + R EH++FLDWL+ +D ++VAGDVFDT +P + + Sbjct: 1 MKLLHTADWHLGHRLHGHERYFEHRSFLDWLMNEISQRDIDGLLVAGDVFDTANPSATSW 60 Query: 61 TLYNRFVVNLQQTGCH--LVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ----- 113 L+ +F+ L+Q H ++++AGNHDS + L+ +++ + ++ + Sbjct: 61 QLFYQFLATLRQQRPHLNVIIIAGNHDSPSKLDAPHELLKSFDLHLIGAVERDTDGRLNC 120 Query: 114 -----ILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADA 168 L R G A +PFLR D+ + ++ L+A + + YQQ +A Sbjct: 121 DKLAIPLKDRTGCVQAWCAAVPFLRSADLRMDEEQNG---EEDRLVAGVREVYQQVFAHI 177 Query: 169 CKLRGDQPLPIIATGHLTTVGASKSD-AVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQ 227 LR + P++A GH S+ + R + G A P F ADY+ALGH+H AQ Sbjct: 178 DSLRTAEQ-PLLAMGHAYLQSGELSELSERKVLGGNQHALPLSVFNGADYVALGHLHLAQ 236 Query: 228 IIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLA 287 + E V Y GSP+PLS E + +T + ++ + + +P T + L A Sbjct: 237 SLS--EQVHYAGSPLPLSLAEQNYPHQLIELTVAEHQITVTDKIRIPRTVDILRLPAQPA 294 Query: 288 SITAQLEQ-----WRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSR 342 + A L + D+ Q +L++ + ++ ++ +I A PV + + Sbjct: 295 PLDAVLAELDNLSLTDLPQNQRPFLEVRVRLEKPEARLRERILAALVDKPVRLARIYTEY 354 Query: 343 EQRERVLASQQRE-TLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGE 397 +A Q L LS EVF + S L + F L E Sbjct: 355 SGHGLGIADQMTSVPLDSLSPREVFELCYQ-RQYASSPDSVLLNCFEELETALENE 409 >UniRef50_C7M699 Nuclease SbcCD, D subunit n=2 Tax=Capnocytophaga RepID=C7M699_CAPOD Length = 407 Score = 282 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 115/413 (27%), Positives = 191/413 (46%), Gaps = 31/413 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M +LHT+DWHLGQ FY R EHQ FLD LL+ + D ++++GDVFDT +P + Sbjct: 1 MNLLHTADWHLGQTFYQYDRYNEHQYFLDNLLQIIEEQHTDVLLISGDVFDTANPAVASV 60 Query: 61 TLYNRFVVNLQQ--TGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ----- 113 + F+ + ++ +AGNHDS L + ++ +V Q Sbjct: 61 KQFYHFLHQATERFPQLQIIAIAGNHDSPVRLEMPQPLLEDTQVHLVGYVKRNEQREIDY 120 Query: 114 ---ILPRRD-GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADAC 169 I+P + G A +PFLR D ++ + + +Y++ A Sbjct: 121 KRLIIPLYERGEVMAYCLAVPFLRLGDTPKNE------DTNPDYTQGVEAFYREITEKAL 174 Query: 170 KLRGDQPLPIIATGHLTTVGASKSD---AVRDIYIGTLDAFPAQNFPPA-DYIALGHIHR 225 + + P+IA GHL +GA SD A R I IG ++ F +FP YIALGHIH+ Sbjct: 175 AIAKGK--PLIAMGHLHALGAELSDEDTAERPI-IGGMEGFKPTSFPNVLQYIALGHIHK 231 Query: 226 AQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGD 285 AQ +GG H+RY GSPIPLSF E V + G+++ ++ + +P+ PM + Sbjct: 232 AQTLGGKAHIRYSGSPIPLSFSEKDYQHQVVAFSLEEGRVQDIKTVPIPLHTPMLSVPER 291 Query: 286 LASITAQLEQW----RDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLL--VR 339 + L + + P +L++++ +E +++ I V + VR Sbjct: 292 PLPVKEVLNALASLPKGTTHTPAPYLEVKVLLNEPAPELKNSILKAIAHKHVRLARIDVR 351 Query: 340 RSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLH 392 ++Q + Q+ TL++L EV +R+ + + + + LF + Sbjct: 352 YQQQQNTKKETLQKEITLNDLQPYEV-LQRVYQNKFQKELPEFYKPLFDEAME 403 >UniRef50_C1I2I4 Nuclease SbcCD n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I2I4_9CLOT Length = 389 Score = 281 bits (719), Expect = 3e-74, Method: Composition-based stats. Identities = 75/397 (18%), Positives = 161/397 (40%), Gaps = 24/397 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+I H DWH+G+ + + ++ + E + + D +++AGD++D PP +A Sbjct: 1 MKIFHMGDWHIGKLVNGFYMTEDQEFIIEKIYEAIKKEKPDVVVIAGDLYDRSVPPVHAV 60 Query: 61 TLYNRFVVNL-QQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L N+ + + + ++ LAGNHDS + + ++ +V + + D Sbjct: 61 ELLNKTMKKIVKDLNTKVIALAGNHDSNERVEFASSLLCDSGLYIVGNLKRKIDKIVLED 120 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 PIP+ ++ I+ + I + ++ Sbjct: 121 EYGKVNFYPIPYADV-PVVRDLFEDENIKTHDLAMQKIISEILNDF--------NEDERN 171 Query: 180 IATGHLTTVGA--------SKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG 231 IA H +SD+ + + IG + +++F +Y ALGH+H Q + G Sbjct: 172 IAVAHGYVTQMKEDNFEALEESDSEKPLSIGGTEYINSKHFEKFNYTALGHLHGPQKV-G 230 Query: 232 MEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITA 291 + +RY GS + SF E + K + +V +E N+ + V G L I Sbjct: 231 SDKIRYSGSLMKYSFSEVNQKKGITIVDIDENGDVDIEIYNLKPRRDFRVKTGTLEEIIK 290 Query: 292 QLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLAS 351 + + ++ ++ + + L D K++++ ++ +E+ R R +A+ Sbjct: 291 GFDNSSENYED---YIKVILKDKGELLDPMAKLRSIYPNV-MELTREERVSRNSSRNVAT 346 Query: 352 QQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFT 388 +E S++++ + F + E E + ++ + Sbjct: 347 NIKEK-SKITLFKNFYEDIMDECCSEEEINVIEKIIE 382 >UniRef50_B0MBW6 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MBW6_9FIRM Length = 378 Score = 281 bits (719), Expect = 3e-74, Method: Composition-based stats. Identities = 93/392 (23%), Positives = 159/392 (40%), Gaps = 22/392 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M++LH +D HLG+ + + + L +L + VD +++AGD++D PP+ A Sbjct: 1 MKLLHMADLHLGKTVNGMNFIEDQRHVLAQVLGLMEKEPVDGLLLAGDIYDRSIPPAEAV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 TL + F+ + + + AGNHDS L + + N V + + D Sbjct: 61 TLLDWFLTGTAELMVPVFLAAGNHDSGERLEFGQKLFGQQNIYVEGTLREEFPAIRLEDE 120 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 L +P+ +P + + I + + ++ + D+ + Sbjct: 121 YGPVCLHLLPYFKPAEARALFPE-DEIRTHEDAMRSV----------LARHPVDRTERNV 169 Query: 181 ATGHLTTVGAS---KSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRY 237 H G +SD+ + +G + F DY ALGHIH Q G E VRY Sbjct: 170 LVTHQFVTGTEPVTQSDSELLLSVGGTEQISYTVFEDYDYTALGHIHGPQK-AGRETVRY 228 Query: 238 CGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWR 297 GS + SF E K V LV V + M +KG L + L+ Sbjct: 229 SGSLLKYSFSEEFHKKSVTLVELKEKGSIIVTVYPLKPRHDMRRIKGKLEDL---LDPQV 285 Query: 298 DVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETL 357 + + ++ +T +E L D K++A ++ +E+ L +R R + V A + +T Sbjct: 286 VEAADCEDYISAVLTDEEELADPMEKLRASYPNI-MELNLEKRQRSGGDEVYADVREKTP 344 Query: 358 SELSVEEVFNRRLALEELDESQQQRLQHLFTT 389 EL E F L E +E + + L+ L Sbjct: 345 LELG--ESFL-ELTCGEAEEKRMEFLKKLLEE 373 >UniRef50_UPI0001C366D6 nuclease SbcCD, D subunit n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C366D6 Length = 384 Score = 281 bits (718), Expect = 3e-74, Method: Composition-based stats. Identities = 83/392 (21%), Positives = 157/392 (40%), Gaps = 25/392 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR +HTSD H+G+ S E A L + + + Q DA++++GD++D PP+ A Sbjct: 1 MRFIHTSDLHIGKTVGGFSMLEEQDAALKQITDYVKERQADAVLLSGDLYDRSVPPAAAV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 T+++ F+ L + G ++ +AGNHD + + I+ + + + D Sbjct: 61 TMFDLFLTGLSELGVTILAIAGNHDCGERIGFANRILEKRGLYLEGKLEDPVRFVDIPDQ 120 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 + PF RP ++ + + ++ + I + I Sbjct: 121 WGAVRVHLAPFARPAEVKSLYRCGSSMKTFEESFEEILRHVTYS----------PGGRDI 170 Query: 181 ATGHLTTVG----ASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVR 236 H V SD+ + +G D A F P Y ALGHIH Q IG V Sbjct: 171 LMAHQFVVNQGLLPELSDSETRVSVGGTDQVEAALFQPFCYTALGHIHGCQQIGKQP-VY 229 Query: 237 YCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQW 296 Y GSP+ SF EC K V S+E L + M ++G L+ + Sbjct: 230 YSGSPVKYSFSECSHQKSVLYGEVGKDGKVSLERLPLTPVHDMRKIRGRLSDLILP---E 286 Query: 297 RDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRET 356 + +P ++ +T + L D ++++ + ++ ++ + E+ + + Sbjct: 287 VVSAADPEDYILAVLTDETELLDPIGTLRSVYPN----IMQLKWEKRALEQDGSVIHEDI 342 Query: 357 LSELSVEEV---FNRRLALEELDESQQQRLQH 385 + E E+ F + + + + Q+ ++ Sbjct: 343 MKEKGPYELFADFYELVTGKAMTKEQEAVMRE 374 >UniRef50_A3YYZ0 Putative exonuclease n=1 Tax=Synechococcus sp. WH 5701 RepID=A3YYZ0_9SYNE Length = 396 Score = 281 bits (718), Expect = 4e-74, Method: Composition-based stats. Identities = 100/396 (25%), Positives = 173/396 (43%), Gaps = 16/396 (4%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR+LHTSDWHLG++F+ S E L ++ A+ VDA+++AGD++D PP+ A Sbjct: 1 MRLLHTSDWHLGRSFHGASLLQEQAEVLARIVALARDGVVDAVLIAGDLYDRAIPPAEAV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASA--GHAPQILPRR 118 L+N + L+Q+G +V +AGNHDS ++ ++A T+ H P ++ R Sbjct: 61 LLFNDTLAQLRQSGAAVVAIAGNHDSHVRVSVYDPLLASFGVTIRGDVRRAHEPVLVSPR 120 Query: 119 DGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLP 178 G + P+P+L P A E + A R Q P Sbjct: 121 LGGAPVAIYPLPYLEPAVDGPGLAWALEQEAAVVPPTRLRHDEVTRLALERIRRDLQQRP 180 Query: 179 ---IIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHV 235 + H G S++ R++ +G +D + F DY+ALGH+H +Q + G + Sbjct: 181 HHRSVLVAHTFVAGGESSESERELTVGNVDRVSVEAFTGFDYVALGHLHGSQQLDG-PRL 239 Query: 236 RYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQ 295 Y G+P+P SF E +K V +V + +VE + + V + +A ++G + + Sbjct: 240 AYSGTPLPYSFSEQHHTKSVRIVELNAAGQPTVEIVPLQVGRSLATIEGCIEQL------ 293 Query: 296 WRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRE 355 RD E V + + + + +Q + L E P L R E + + ++ Sbjct: 294 CRDPQFEAAVEARVRVILTDEVLPLQA-MARLRERFPHVAELRHRPPELLRSTASERHQQ 352 Query: 356 TLSELSVEEV---FNRRLALEELDESQQQRLQHLFT 388 S E+ F + ++ + L+ Sbjct: 353 VQQAASPFELTSAFFADQQGRSANSAEAELLRQALE 388 >UniRef50_A7V415 Putative uncharacterized protein n=2 Tax=Bacteroides RepID=A7V415_BACUN Length = 403 Score = 280 bits (717), Expect = 5e-74, Method: Composition-based stats. Identities = 103/408 (25%), Positives = 174/408 (42%), Gaps = 29/408 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLG Y+ R E QAFL L Q DA++V+GD++ SP + + Sbjct: 1 MKILHTSDWHLGHTLYNYDRTVEQQAFLRQLTRIVTEEQPDAMVVSGDIYHYSSPAAATQ 60 Query: 61 TLYNRFVVNLQQT--GCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPR- 117 +Y ++N+ Q +VV AGNHDS + L ++ VV + + + Sbjct: 61 KMYTDAMLNIHQACPEMTIVVTAGNHDSSSKLEIDSNLWQHFGLNVVGNIERTAEEVNLD 120 Query: 118 -------RDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACK 170 + + +P + P++ ++Q A+ D K Sbjct: 121 KHIIEINNEKKTKGYVIAVPHVYPQNFPLLDTETPRDQRQARFFQALL--------DEVK 172 Query: 171 LRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNF-PPADYIALGHIHRAQII 229 R LP++ HL+ G+ +S D IG ++ P DY+ALGHIH + I Sbjct: 173 KRNTAQLPVVLMAHLSIEGSDRSG--HDESIGGIEYVPLSAMGEGYDYLALGHIHCPRDI 230 Query: 230 GG-MEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLAS 288 G H RYCG+P+P+SFDE V ++ G + + P+ L D Sbjct: 231 KGSHHHARYCGTPLPVSFDET-YPHSVSIIELEKGAEPQISTREIENPIPLVTLPHDPTP 289 Query: 289 ITAQLEQWRDVSQEPPVWLDIEITTDEYL-HDIQRKIQALTESLPVEVLLVRRSREQ--- 344 L+ + +E P +L + + T YL D K + + ++ +RE+ Sbjct: 290 FEDALKLLEEYPEEKPAYLRLNVLTKGYLPPDCNEKASNAAKGKACKYCYIKTTRERQAD 349 Query: 345 --RERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTT 390 + ++ Q+ + +S L + ++ R EE+D Q ++ + Sbjct: 350 TDESKPISIQEMQEMSPLEIARLYYRETEGEEMDPELCQLMETVMQKV 397 >UniRef50_B5I7A7 Exonuclease n=3 Tax=Actinomycetales RepID=B5I7A7_9ACTO Length = 399 Score = 280 bits (716), Expect = 6e-74, Method: Composition-based stats. Identities = 87/397 (21%), Positives = 154/397 (38%), Gaps = 23/397 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR LHTSDWHLG+ F+++ +AFLD L+ TA+T VDAI+VAGD++D P A Sbjct: 1 MRFLHTSDWHLGRRFHTEDLIPAQRAFLDHLVGTARTEDVDAILVAGDIYDRAIPSLDAV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 L+NR + L +++++GNHDS L ++A + + D Sbjct: 61 RLFNRALHQLADLDVPIIMISGNHDSAHRLGVGSGLLARAGIHLRTDPDTCDIPVLLEDA 120 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 + IP+L P + + +E + A+ + Sbjct: 121 DGPVAVYGIPYLEPSMVR------DRLEAEAVSHRAVLTAALDRIHADLTNNQPAGTRSV 174 Query: 181 ATGHLTTVGASKS----------DAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIG 230 H + + R+I +G + A F DY+ALGH+H Q + Sbjct: 175 VLAHAFVTSGTGQPEERDESEESTSEREIAVGGVAHVGADVFAGIDYVALGHLHGPQRV- 233 Query: 231 GMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASIT 290 + + Y GSP+ SF E +K V LV + + ++ PV + + G + + Sbjct: 234 -TDRIHYSGSPLAYSFSEARHTKSVTLVDLTPNAVPALARQPCPVPLRLERVSGFMEDLL 292 Query: 291 AQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKI-QALTESLPVEVLLVRRSREQRERVL 349 + WL++ +T + ++ + + ++ + Sbjct: 293 TNPDH----EPLKDAWLEVTLTDTALPFEAMARLRRRFPHTASLKHKPALIPAQATNTPT 348 Query: 350 ASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHL 386 SQ+ +L + F + + +Q LQ Sbjct: 349 YSQRIRGRGDLDIAGDFINSMRGTDPTPDEQNLLQQA 385 >UniRef50_A5N4G1 Predicted exonuclease, sbcD related n=45 Tax=Clostridia RepID=A5N4G1_CLOK5 Length = 414 Score = 280 bits (715), Expect = 9e-74, Method: Composition-based stats. Identities = 104/418 (24%), Positives = 192/418 (45%), Gaps = 31/418 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHTSDWHLG++ SR E +AFL+ + Q + VD +I+AGD++D +PP+ A Sbjct: 1 MRILHTSDWHLGKSLEGHSRMEEQEAFLEDFINIVQKNHVDLVIIAGDIYDNANPPARAE 60 Query: 61 TLYNRFVVNLQQTGCHL-VVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ------ 113 ++ + + L G L +++AGNHD+ L + + ++ + Sbjct: 61 KIFYQTLKKLSSKGERLTLIIAGNHDNPDRLVAAGPLARDHGIIMMGTPKSIVPRGDYGN 120 Query: 114 ---------ILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQH 164 + A++ +P+ P + ++ N +E+++ + + D ++ Sbjct: 121 NKVINSGQGFIEIELNKEKAIIIAVPY--PSEKRLNEVLYNSMEEEKEQIKSYNDRIKKL 178 Query: 165 YADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPP-ADYIALGHI 223 + + K + + I HL T+G+ ++ + R++ +G FP A YIALGHI Sbjct: 179 FHNLSKNYREDTI-NILISHLFTLGSDQAGSERNVQLGGSFIVNKDCFPENAQYIALGHI 237 Query: 224 HRAQIIGGME-HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVL 282 H+ QI+ G RY GSPI + E K +V GK ++ + + V +P+ V Sbjct: 238 HKPQIVPGTNGKARYSGSPIQYNKKEINFKKKCFIVDVKAGKECNIHEIELKVYKPIEVW 297 Query: 283 KGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSR 342 K +SI +E+ +++ W+ +E+TTD ++ + + K T+ +E++ Sbjct: 298 K--CSSIEDAIERCTK-NKDRNCWVYLEVTTDRFIREDEIKFMKTTKKDIIEIV-----P 349 Query: 343 EQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHEA 400 + + + S S EE+F R +E Q + L + + E EA Sbjct: 350 KIGDNPSKNINIHDFSHKSFEEIF-REFYFKERKVEPQSEVIDLLLSIMKE-EKEDEA 405 >UniRef50_A7BEB8 Putative uncharacterized protein n=2 Tax=Actinomyces RepID=A7BEB8_9ACTO Length = 425 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 111/408 (27%), Positives = 179/408 (43%), Gaps = 33/408 (8%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M ILHTSDWHLG+ + S AF++WL+ + VDA++++GDVFD PP A Sbjct: 25 MLILHTSDWHLGRTLHGASLGDSADAFIEWLVALVRERGVDAVLISGDVFDRAVPPVDAL 84 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 R + L + +++ +GNHD A L D++ VV P+ + Sbjct: 85 ARMRRALRELTEI-TTVILTSGNHDGAARLGLFADMLTPS-LHVVTD----PEAIGTPVE 138 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQ-------QHLLAAITDYYQQHYADACKLRG 173 GA++ P+P+L P + S + L + + A + ++ AD R Sbjct: 139 AGGALVYPMPYLEPDLVRQSLSDLPARGEADLPTPLPRSHQAVLGAALRRVRADLEAWRD 198 Query: 174 -DQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFP----------PADYIALGH 222 P IA H GA SD+ RDI +G + + A F DY+A GH Sbjct: 199 AGDERPAIAMPHAFVTGAQASDSERDIQVGGVSSVSADLFDTLGGEEPLTHGLDYVAAGH 258 Query: 223 IHRAQIIGGME-HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAV 281 +HR Q I G +RY GSPI SF E G +K + LVT + +E + +P + +AV Sbjct: 259 LHRPQDISGASVPIRYAGSPIAYSFSEAGATKSITLVTTDATSVTDIEVVPIPTLRGIAV 318 Query: 282 LKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRS 341 L+G + + A ++ S ++ I +T D +R + + E P +++V R Sbjct: 319 LEGTMDELLADPDEATTAS-----YVSITVTDDAR---PERMVPRIREVYPHALVVVHRP 370 Query: 342 REQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTT 389 + A R + V E F + L +++ ++ Sbjct: 371 SQAPALAPAMTVRASRDPREVTEEFYEAVGGRALSAQERELALDVWAQ 418 >UniRef50_A7LRG6 Putative uncharacterized protein n=5 Tax=Bacteroides RepID=A7LRG6_BACOV Length = 417 Score = 278 bits (710), Expect = 3e-73, Method: Composition-based stats. Identities = 117/412 (28%), Positives = 190/412 (46%), Gaps = 33/412 (8%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 +RILHT+DWHLGQ F+ R EH FL+WL E + ++DA+I+AGDVFD +P + ++ Sbjct: 2 IRILHTADWHLGQTFFGYDRTEEHGVFLNWLAEEIRQKEIDALIIAGDVFDVSNPSAASQ 61 Query: 61 TLYNRFVVNLQQTG--CHLVVLAGNHDSVATLNESRDIMAFLNTTVVA----------SA 108 ++Y +F+ + +V++AGNHDS A L ++ + T V Sbjct: 62 SMYYQFIYRVTAENPYLQIVIVAGNHDSAARLEAPLPLLQAMRTEVRGVVRKLEGGEIDY 121 Query: 109 GHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADA 168 H L R G + +PFLR D Q N + + Y Q Sbjct: 122 DHLTVELKNRKGEVELLCMAVPFLRQGDYPAVQTEGN------PYAEGVRELYAQLLQRL 175 Query: 169 CKLRGDQPLPIIATGHLTTVGASKSD---AVRDIYIGTLDAFPAQNF-PPADYIALGHIH 224 K R + I+A GHL G+ ++ + R + IG L+ + F Y ALGHIH Sbjct: 176 WKRRTENQ-AILAIGHLQATGSEIAEKDYSERTV-IGGLECVSPETFSEQIAYTALGHIH 233 Query: 225 RAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLK- 283 +AQ + G E+VRY GSPIP+SF E V +VTF G +E L P P+ + Sbjct: 234 KAQRVSGRENVRYAGSPIPMSFAEKHYHHGVVMVTFDGGCAVDIERLECPKLIPLLSVPN 293 Query: 284 GDLASITAQLEQWRDVSQEPPV--WLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRS 341 G+ S A LE +++ + V +L++++ +E ++++I+ + + + Sbjct: 294 GEPVSPEAVLEALKELPETEAVAPYLEVKVLLEEPEPMLRQEIEDALADKNYRLARIVST 353 Query: 342 REQRERVLASQQR---ETLSELSVEEVFNRRLALEELDESQQQR-LQHLFTT 389 + L E+S ++ + A E++ + + L LF Sbjct: 354 YRTETGNTTKENENWKRGLQEMSPLQI--AQSAFEKIYQVEMPVELTGLFEE 403 >UniRef50_C3NXC1 Exonuclease SbcD n=22 Tax=Vibrio RepID=C3NXC1_VIBCJ Length = 379 Score = 277 bits (708), Expect = 6e-73, Method: Composition-based stats. Identities = 94/388 (24%), Positives = 160/388 (41%), Gaps = 20/388 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ LHTSDWHLG+ F+ S + A L L++ + + VDA+IVAGD++D PP+ A Sbjct: 1 MKFLHTSDWHLGRQFHQVSLLDDQSAVLAQLIDFLRDNPVDAVIVAGDIYDRSIPPTAAI 60 Query: 61 TLYNRFVVNL-QQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L + V + + L+++ GNHD L + M + A Q L Sbjct: 61 DLLDEVVSVICGELKTPLLMIPGNHDGAKRLGFAAKQMKNSGLHIFADFEQMMQPLVLHS 120 Query: 120 G-TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLP 178 +P+ P + H D Q ++ + + Sbjct: 121 PQAGEVAFWGMPYHDPELVRHYY----------HNDITTHDAAHQFLCESILAQRNPSQR 170 Query: 179 IIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYC 238 + H GA +S++ R + IG D ++F P DY+ALGH+H+ Q + G EH+RY Sbjct: 171 HVLISHCFVDGAMESESERPLSIGGSDRVDHRHFLPFDYVALGHLHQPQ-MKGAEHIRYS 229 Query: 239 GSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRD 298 GS + SF E ++K LV S ++ + M +++G+L +I A Sbjct: 230 GSLMKYSFGEQHQNKGATLVELGQQGFISATHIPLIAPHQMRIIEGELEAILAA----GA 285 Query: 299 VSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLS 358 + +L + + + D K++ + P + L + + R Sbjct: 286 TDPQADDYLLVRLLDKHAILDPMEKLRQV---YPNVLHLEKPGMLIGVDQEMGKARLARG 342 Query: 359 ELSVEEVFNRRLALEELDESQQQRLQHL 386 EL + F E L E Q++ + + Sbjct: 343 ELDMFRDFFLEAKREPLSEQQEKVVIEV 370 >UniRef50_C5NXT6 Nuclease sbcCD subunit D n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXT6_9BACL Length = 379 Score = 276 bits (707), Expect = 6e-73, Method: Composition-based stats. Identities = 83/391 (21%), Positives = 158/391 (40%), Gaps = 20/391 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 ++ +HT+DWH+G+ K + Q L+ L+ + D +I+AGD++D P A Sbjct: 2 VKFIHTADWHIGRKLQGKDLLEDQQVVLENLITEMKKINPDFLIIAGDLYDRSVPSKEAT 61 Query: 61 TLYNRFVVNLQ-QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 TL +V + + + ++GNHDS L + + A L D Sbjct: 62 TLLQELLVKINIECNIPIFAISGNHDSRERLAIGEAWFSKHKFYLHTRLEQAFDKLSYED 121 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 A + +P+ P ++ E + + + D D Sbjct: 122 ----ADIYLLPYFEPFEVR---------EHFEDATLTTHNTATKRVIDEIYKNLDTNKTN 168 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCG 239 I H G ++D+ R+I +GT++ F DY+ALGH+H I E ++Y G Sbjct: 169 ILVAHTFVSGGLETDSEREISVGTVENVAVGVFDRFDYVALGHLHNPNAIKE-ERLKYSG 227 Query: 240 SPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDV 299 SP+ SF E ++K + L+ + + S E + + + + + G + + Q Sbjct: 228 SPMAYSFSEASQTKGMRLIEVTK-ESYSEEFIQLKQKRKLHNISGSYEEVLTKEFQLNYD 286 Query: 300 SQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSE 359 + + +E++ E + D +I+ + +L +R+ V ++ T S Sbjct: 287 CKND--YFSMELSDLEGITDPLPRIKEYYPNT--LILKQKRNTGIDNEVKLDREMLTKSP 342 Query: 360 LSVEEVFNRRLALEELDESQQQRLQHLFTTT 390 L + E F EL + Q++ L ++ Sbjct: 343 LQLIEGFYNEQTGSELTDGQKKILVNIIDKV 373 >UniRef50_C8P3T7 Exonuclease n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P3T7_ERYRH Length = 379 Score = 276 bits (706), Expect = 9e-73, Method: Composition-based stats. Identities = 85/397 (21%), Positives = 170/397 (42%), Gaps = 24/397 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+I+H +D H+G+ S + + L+ ++E+ T + +++AGDV+D +P + A Sbjct: 1 MKIVHIADLHIGRRLNDLSLLEDQRYVLNQIIESLDTIKPHVLLIAGDVYDKANPSAEAF 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 ++N F+ L +++++GNHDS L R + + +V+ + ++ +D Sbjct: 61 EVWNDFLTQLSHRNIQVLIISGNHDSQERLGVGRALFEEHDIYLVSHYTGSIPVVTLQDD 120 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 IP+++P + G Q+ D L+ +Q + Sbjct: 121 LGPVHFHMIPYIKPSMVRNYHPEFTGTTFQEAFEFIFQD-----------LKINQEDRNV 169 Query: 181 ATGHLTTVGASK----SDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVR 236 A H +G SD+ +G LDA A F DY+ALGHIHR Q I G E +R Sbjct: 170 AIAHQFVIGNGTTPILSDSEIGPSVGGLDAIDASLFQKFDYVALGHIHRPQAI-GRETIR 228 Query: 237 YCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQW 296 Y GSP+ SF EC +K + ++ + ++ + + + + +LKG L + ++ Sbjct: 229 YAGSPLKYSFSECMHTKQLPIIDLD--RDVAISFVELKPLRDVRILKGPLQHLYELGKED 286 Query: 297 RDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRET 356 R ++ +T D D K++++ ++L R+ + A++ + Sbjct: 287 RTE-----DYIHAILTDDIIQGDALHKLRSVYQNLVSLDFDNARTSSKSSLSRATEILDQ 341 Query: 357 LSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHT 393 + F L + ++ + ++ + Sbjct: 342 -KPFDLFNAFFTTLNGRDFNQEESDIVKAVIDEIQEE 377 >UniRef50_Q2IN32 Exodeoxyribonuclease I subunit D n=3 Tax=Anaeromyxobacter RepID=Q2IN32_ANADE Length = 428 Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats. Identities = 119/423 (28%), Positives = 182/423 (43%), Gaps = 32/423 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 +RILHT+DWHLG + R EH+ F+ WLL+TA+ VDA+IVAGDVFD +PP+ A+ Sbjct: 14 LRILHTADWHLGHALHGVDRGPEHERFVAWLLDTAEAEAVDAVIVAGDVFDAANPPAGAQ 73 Query: 61 TLYNRFVVNLQQ--TGCHLVVLAGNHDSVATLNESRDIMAFLN-TTVVASAGHA------ 111 L+ RF+ + LVV+ GNHDS + L+ ++ + VV Sbjct: 74 ALWYRFLAEAWRRLPRLQLVVVGGNHDSASRLDAVDPLLREMGRLHVVGGVPRGGAGAPD 133 Query: 112 ----PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYAD 167 L G A + +P+LR D+ A + E T + + Sbjct: 134 LEKLLVPLEDAAGRRAAWVAAVPYLRAADLGAGAADADAAEA--------TRRFYAAALE 185 Query: 168 ACKLRGDQPLPIIATGHLTTVGASKSD-AVRDIYIGTLDAFPAQNFP-PADYIALGHIHR 225 + R ++ATGHL VG S+ + R + +G A PA FP Y+ALGH+H Sbjct: 186 RARARRAPGEALLATGHLYAVGGKTSELSERRLAVGNQAAVPADAFPADLAYVALGHLHL 245 Query: 226 AQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVL--- 282 AQ +GG E VRY GS +PLSF E G V + + + L VP + + Sbjct: 246 AQAVGGRETVRYSGSALPLSFGERGYRHGVVVADLDGEAVRAQRVLRVPRFVELVSVPDG 305 Query: 283 --KGDLASITAQLEQWRDVSQEPPV---WLDIEITTDEYLHDIQRKIQALTESLPVEVLL 337 L + A LE + P L++++ + ++ + ++ Sbjct: 306 EAPAPLPEVLAALEALPARGEGPDALRPLLEVKVRLERPEPALRALLDQALAGKEARLVR 365 Query: 338 VRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGE 397 + + R L +R L +L E+VF R+ + L F L + E Sbjct: 366 IATTLAGTGRALGDGERRALGDLVPEDVFRRKYDA-DYGGPPPDALLEAFRALLQEVESE 424 Query: 398 HEA 400 A Sbjct: 425 EGA 427 >UniRef50_C9KXE7 Nuclease SbcCD, D subunit n=10 Tax=Bacteroides RepID=C9KXE7_9BACE Length = 416 Score = 276 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 119/426 (27%), Positives = 194/426 (45%), Gaps = 40/426 (9%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 +RILHT+DWHLGQ F+ R EH+AFLDWL ++DA+I+AGDVFD +P + ++ Sbjct: 2 IRILHTADWHLGQTFFGYDRTEEHEAFLDWLAGEILRQEIDALIIAGDVFDVSNPSAASQ 61 Query: 61 TLYNRFVVNL--QQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVA----------SA 108 ++Y RF+ + + +V++AGNHDS A L ++ + T V Sbjct: 62 SIYYRFIYRVTAENPNLQIVIVAGNHDSAARLEAPLPLLQAMRTEVRGVVRKLEGGAVDY 121 Query: 109 GHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADA 168 H L R G + +PFLR D Q N + + + Y Q Sbjct: 122 DHLCVELKNRQGEVELLCMAVPFLRQGDYPVVQTEGNPYSE------GVRELYTQLLRKL 175 Query: 169 CKLRGDQPLPIIATGHLTTVGASKSD---AVRDIYIGTLDAFPAQNFP-PADYIALGHIH 224 K R I+A GHL G+ ++ + R + IG L+ + FP Y ALGHIH Sbjct: 176 WKRRKPNQ-AILAIGHLQATGSEIAEKDYSERTV-IGGLECVSPEAFPEQIAYTALGHIH 233 Query: 225 RAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLK- 283 +AQ + G E+VRY GSPIP+SF E V +V F G + + P + P+ + Sbjct: 234 KAQRVSGRENVRYAGSPIPMSFAERHYHHGVVMVAFDGGCAVDIRRIECPKSIPLISVPS 293 Query: 284 GDLASITAQLEQWRDVSQEP--PVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLV--- 338 G+ LE ++ + +L++++ +E ++++I+ + + + Sbjct: 294 GEPELPEKILEMLGELPETEGTAPYLEVKVLLEEPEPMLRQEIEDVLADKNYRLARIVSS 353 Query: 339 RRSREQRERVLASQQRETLSELSVEEV----FNRRLALEELDESQQQRLQHLFTTT-LHT 393 R+ + + ++ L E+S ++ F + + E+ E L LF L Sbjct: 354 YRTGAENVEKEETDWKKGLQEMSPLQIAQSAFEK-IYQSEMPED----LVDLFQEAYLVA 408 Query: 394 LAGEHE 399 E E Sbjct: 409 TRKEEE 414 >UniRef50_B0NZF1 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0NZF1_9CLOT Length = 379 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 87/399 (21%), Positives = 175/399 (43%), Gaps = 29/399 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILH D HLG+ S + + LD ++ + ++D I++ GD++D P A Sbjct: 1 MKILHLGDLHLGKRVNEISMIEDQKFILDQIVTLVKEEKIDVILLCGDIYDKAIPTIEAI 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 L + F+ L +++++GNHDS L+ R++ N + + + + ++ Sbjct: 61 HLLDEFLEELSDLKVKVLMISGNHDSSERLSFGRNLFKRSNLYIASQFNQEIEKITIKED 120 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL-RGDQPLPI 179 +PF++P I H+L T+ Y++ + + + ++ Sbjct: 121 GYNINFYMLPFVKPAYI-------------NHVLKIQTETYEECFKHLMEQVKINEDETN 167 Query: 180 IATGHLTTVGA----SKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHV 235 I H SD+ +G +D + F DY+ALGHIH+ Q + G E V Sbjct: 168 ILLAHQFVTVGKNSPELSDSETS-SLGGIDNIDYRLFDAFDYVALGHIHKPQAM-GREMV 225 Query: 236 RYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQ 295 RY GS + SF E K K ++T S K S+ + + + M ++ L S+ L++ Sbjct: 226 RYAGSILKYSFSEIYKDKQATILTISKNKQISLSHHLLKPLRDMREMECSLESL---LKR 282 Query: 296 WRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRE 355 ++ E ++ + +T +E + D K++ + + V + + R + + Sbjct: 283 KCEIGNEED-YMHVILTDEEQILDAIGKVRTVYPN--VMQISFKNRRHMMQYETIQMKEN 339 Query: 356 TLSELSVEEVFNRRLALE---ELDESQQQRLQHLFTTTL 391 +++ + E+F + ++ +LDE + Q +F + Sbjct: 340 QIADQNPMELFEQFYKMQNHIDLDEKRAQMAISIFEEVI 378 >UniRef50_Q2JDN8 Exodeoxyribonuclease I subunit D n=24 Tax=Actinomycetales RepID=Q2JDN8_FRASC Length = 418 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 98/383 (25%), Positives = 158/383 (41%), Gaps = 14/383 (3%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR LHTSDWHLG+ Y AF+D L++ ++ VD +++AGDV D PP A Sbjct: 28 MRALHTSDWHLGRGLYGHDLMPAQAAFVDHLVDVVRSEGVDVVLIAGDVHDRAIPPVGAL 87 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 L++ + L+ G +VV++GNHD+ L + ++ + + D Sbjct: 88 ELFDEALSRLRDAGARVVVISGNHDAARRLGDKAGLLDP-RVRIRTDPAAVGDPVVVEDP 146 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAA---ITDYYQQHYADACKLRGDQPL 177 + IP+L P + + AA ++ +A L Sbjct: 147 AGAVRVYAIPYLEPSAANSQLPEPAQAPSGSDVPAAGIPAATMHRAMHAVRADLARYPDA 206 Query: 178 PIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRY 237 + H G + S++ RDI +G + PA+ F Y ALGH+HR Q I VRY Sbjct: 207 RSVVVAHAWVTGGAASESERDISVGGVGNVPARLFEGITYTALGHLHRPQAI--APSVRY 264 Query: 238 CGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWR 297 GSP+ SF E G +K LV L +V + VP + M +L+G LA + Sbjct: 265 SGSPLAYSFSESGDAKASLLVEIGPTGLGNVTRIGVPARRRMTLLRGSLADLLTDPAH-- 322 Query: 298 DVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQR-ET 356 + ++ +T D ++Q P + L + + +L+ +R Sbjct: 323 --APHEADFVSAVLTDPVRPMDAMARLQ---HRFPFALRLAHEPETEPDEILSFGRRTRG 377 Query: 357 LSELSVEEVFNRRLALEELDESQ 379 SEL + E F + + Sbjct: 378 RSELEIAEAFVAHVRSAPSARER 400 >UniRef50_C6D8R4 Nuclease SbcCD, D subunit n=81 Tax=Bacillales RepID=C6D8R4_PAESJ Length = 389 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 88/402 (21%), Positives = 159/402 (39%), Gaps = 27/402 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ HT+DWHLG+ + + L+ + + DA+I+AGD++D PP+ A Sbjct: 1 MKFFHTADWHLGKLVQGVYMTEDQRYVLEQFASAVELERPDAVIIAGDLYDRAIPPTEAV 60 Query: 61 TLYNRFVVNL-QQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L + + + ++ ++GNHDS ++ +M + + + +D Sbjct: 61 DLLDELLERIVVGLDTPVLAISGNHDSPDRIDFGTAMMESRGLHIAGRLRTEHKPVVLKD 120 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 + +P+ P + + N I + AIT H A + Sbjct: 121 AFGEVHVHLVPYADPAQVRITYEDEN-IRTHDEAMRAITGRIASHMDPAARH-------- 171 Query: 180 IATGHLTT--VGASK---SDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEH 234 I GH GA++ SD+ R + IG + A F P Y ALGH+H+A + G E Sbjct: 172 IVVGHAFVTATGAAEPNTSDSERPLSIGGAEHVRADYFAPFHYTALGHLHQAHFV-GSEK 230 Query: 235 VRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLE 294 +RY GSP+ S E +K +V G ++E + + M + G + I Sbjct: 231 IRYAGSPLKYSISEEHHNKGYLVVEMDAGGNVAIEKRELKPLRDMRRIAGPIEEIETHPV 290 Query: 295 QWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTES---LPVEVLLVRRSREQRERVLAS 351 ++ + + D + K++A+ + + V VR E + + Sbjct: 291 N--------EDYVFVTLLNDNPVLFPMEKVRAVYPNALHVERRVTAVRGIGEDGDAPETA 342 Query: 352 QQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHT 393 +R +S+ E F + LDE +++ F L Sbjct: 343 VRRSEADPVSLFESFYLEVKGVALDEPKKRLFADTFGGLLRE 384 >UniRef50_A8VW68 N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VW68_9BACI Length = 389 Score = 271 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 87/397 (21%), Positives = 175/397 (44%), Gaps = 19/397 (4%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR+LHT+DWH G+ + R EH+AF+D L ++D +++AGD++D+ +PP+ + Sbjct: 1 MRVLHTADWHFGRTIEGRDRHDEHEAFIDELCGIVHEEEIDVVLIAGDIYDSVNPPAKSE 60 Query: 61 TLYNRFVVNLQQTGCH-LVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L+ + L G +V ++GNHD L+ + ++ + + P + + Sbjct: 61 RLFYDSLSRLSDFGKRTVVAISGNHDHPERLSAASAMLERHSVYIQGQPTLHPLTVDIKA 120 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 +P+L + L + + A + + + K + Sbjct: 121 ADQT---LCVPWLPYPSESRLKEVLAEEADDKVIRDAYNQKIRWMFGELTK-NLSKDHVN 176 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFP-PADYIALGHIHRAQIIGGM-EHVRY 237 IA H+ G + SD+ R I +G + +FP DY ALGH+HR Q + RY Sbjct: 177 IAMSHVFAAGGNGSDSERPIEVGGSYTIASDSFPSNVDYTALGHLHRPQTLKHTIRPARY 236 Query: 238 CGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWR 297 GSP+ SF E G +K V ++ + G + + + + + L+ + + ++ W Sbjct: 237 AGSPLAFSFGERGVAKSVTVLDITPGHEPDIREIPISSGKQL--LRWEAVNGFDEVFHWM 294 Query: 298 DVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETL 357 + ++ W+D+++ ++ I + E P +L+++ + + ++ Sbjct: 295 NERRDFGAWIDLKVHLEQAPS--AETIAKIKEHYP-GILIIQPVFPDMQSPETRRAELSI 351 Query: 358 SELSVEEVFNRR-LALEELDESQQQRLQHLFTTTLHT 393 EL ++F ++ + E D+ RL+ LF + Sbjct: 352 REL--FDMFYKKQMGGAEPDD----RLRSLFIELVEE 382 >UniRef50_D1BNU6 Nuclease SbcCD, D subunit n=3 Tax=Veillonella RepID=D1BNU6_VEIPT Length = 453 Score = 271 bits (693), Expect = 3e-71, Method: Composition-based stats. Identities = 93/458 (20%), Positives = 164/458 (35%), Gaps = 71/458 (15%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLD-WLLETAQTHQVDAIIVAGDVFDTGSPPSYA 59 MR LHT+DWHLG+ FY + + L+ + +D I++AGD+FD PP A Sbjct: 1 MRFLHTADWHLGRIFYGQYLTEDQAHVLEHQFFNILKDENIDGILLAGDIFDRAVPPIEA 60 Query: 60 RTLYNRFVVNLQ-QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRR 118 L++ + L L V++GNHD L R ++ + S HA + Sbjct: 61 IELWDSIITRLAMDYKVPLFVVSGNHDGAERLEVGRSMLGQSGIHIWGSPHHALKPFEFE 120 Query: 119 DGTPGAVLCPIPFLRPRDI----------------------------------------- 137 +CP+PF PR I Sbjct: 121 GTDGKVAICPMPFSEPRRIGEALGLSSANTTSATVQNLESVETKTKAKSKRSKSKKSFQD 180 Query: 138 ------ITSQAGLNGIEKQQHLLAAITDYYQQ----------------HYADACKLRGDQ 175 +N + +T Y+Q ++D + + Sbjct: 181 VIEGSLFADVEDINAESTDTEIADIVTQCYEQNCESTLNLHNYDQMYQAWSDYLYKQVPK 240 Query: 176 PLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHV 235 + IA H +G + R + +G + Q F Y ALGH+H +Q + G + + Sbjct: 241 GMRSIAISHAFVMGGEVGGSERTLSVGGSEQVNPQAFKDFHYTALGHLHGSQRM-GADRI 299 Query: 236 RYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQ 295 RY GSP+ SFDE + K ++ + + V V + + +L+G + L Sbjct: 300 RYSGSPLKYSFDEHMQKKSFTIIDMDTKGTVDISTIPVEVKRDVVILEGYFEDL---LND 356 Query: 296 WRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRE 355 ++ ++ + + D K++ + L+ R + + A + Sbjct: 357 KVLQAKHRDDYVQARLLDTMPIMDGMAKLRQVYHRCMTIDLVGRMAGPIADMGEAI--FK 414 Query: 356 TLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHT 393 L+E + F + E L E +QQ + ++ L Sbjct: 415 ELNERDLFNQFAETVWKEPLTEKEQQYINSVWDRILKE 452 >UniRef50_C8PR34 Exodeoxyribonuclease I subunit D n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PR34_9SPIO Length = 399 Score = 270 bits (691), Expect = 5e-71, Method: Composition-based stats. Identities = 97/402 (24%), Positives = 167/402 (41%), Gaps = 28/402 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M++LHT+D HLG+ + + L+ + + A+I+AGDV+D P + A Sbjct: 1 MKLLHTADLHLGKTLHETPLLGVQEKMLNDIHDILTRDDYAALIIAGDVYDRAIPSAEAV 60 Query: 61 TLYNRFVVNLQQ--TGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRR 118 +L+++F+ +++ + ++ GNHDS L +R+I+ + G + Sbjct: 61 SLFSKFLARIREDCPDTAVFIIPGNHDSAQRLAFAREILQNQRIYIAQDTGKLADPVILT 120 Query: 119 DGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLP 178 +GT + +PFL S+ A + A K +P Sbjct: 121 EGTEKLAVYLLPFLNFGAF--SEETKETYRTAGDSQAEMAAVASHILKQAVK----PDIP 174 Query: 179 IIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYC 238 + HL TVG S + R +IGT + F DY+ALGH+HR Q I + + Y Sbjct: 175 ALLAAHLFTVGGQSSASERT-FIGTAEYVNPDLFSFFDYVALGHLHRCQRI--TDRMYYS 231 Query: 239 GSPIPLSFDECGKSKYVHLVTFS----------NGKLESVENLNVPVTQPMAVLKGDLAS 288 GSP+P SFDE +K V + ++E + + +P+ L+G A Sbjct: 232 GSPLPYSFDESDDAKCVLSIDIDCTPKQPDINGAKAPVTIERIPIISERPLKRLEGSFAD 291 Query: 289 ITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTES-LPVEVLLVRRSREQRER 347 E D + +L+I + E + + ++ L + EQ E Sbjct: 292 FFT--EHLYD--EWSGCYLEITLNDAEVIAHPMQLLRQKFPFLLSIRQKSFMNQEEQEEE 347 Query: 348 VLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTT 389 L ++R L++ E FNR +L ++ Q + Q LF Sbjct: 348 QLTLRERTAEDPLTLAENFNRFESL--INGEQNRMKQELFEQ 387 >UniRef50_C6VPS0 Exonuclease SbcD n=5 Tax=Lactobacillales RepID=C6VPS0_LACPJ Length = 393 Score = 270 bits (690), Expect = 6e-71, Method: Composition-based stats. Identities = 93/400 (23%), Positives = 158/400 (39%), Gaps = 23/400 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M++LHT+DWH+G+ S E +A +L A +VD I++AGD++D P + A Sbjct: 1 MKLLHTADWHIGRTLNGYSLLDEQEAAFKQILTIALAEKVDGIVIAGDIYDRAVPSTDAV 60 Query: 61 TLYNRFVVNLQ-QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 T + + + + + +AGNHD LN R+ +A+ N + A + Sbjct: 61 TSLDHMLQAINIEHHLPIYAIAGNHDGAKRLNYGREWLAYNNFHINTLLAEAFTPIE--- 117 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 TP A + +PF P D EKQ + I D Q+ +D + + Sbjct: 118 -TPTAQIFMLPFFDPIDARVYYQQQGLPEKQVKAIHTIHDAMQRVVSDLVATFDPEKRHL 176 Query: 180 IATGHLTTVGASKSD----AVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHV 235 + T H T + D + +G L F DY+ LGHIH + + Sbjct: 177 LIT-HFTVTPKADDDLELTSETTSKVGGLATLTTDLFADFDYVMLGHIHTRLASPDKDRI 235 Query: 236 RYCGSPIPLSFDECG---KSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQ 292 RY GSP+ + E K V +VT + + E + + L+ ++ Sbjct: 236 RYAGSPVKFNVKEANPKFHGKGVEIVTITP-TAITHEFKPIQPQTDLVTLRAPWETLLDP 294 Query: 293 LEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQ 352 Q+P IT E+ ++A E + +V E + A Sbjct: 295 ----NFYQQQPLKQAWFAITVQEFDRSKHLNVRAQLEQ--IYGTIVELDYESNHQATAIS 348 Query: 353 QRETLSELSVEEV---FNRRLALEELDESQQQRLQHLFTT 389 + ++ELS + + F + +L +QQQ + +F Sbjct: 349 GPKNMNELSPDAIVGQFFHAITGNQLSTTQQQLVDQIFVN 388 >UniRef50_C0VZX2 DsDNA exonuclease subunit n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VZX2_9ACTO Length = 389 Score = 270 bits (689), Expect = 9e-71, Method: Composition-based stats. Identities = 91/404 (22%), Positives = 160/404 (39%), Gaps = 24/404 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHT+DWHLG+ + S E FLD+ ++ +A+++AGD+FD A Sbjct: 1 MKILHTADWHLGRVLHGYSLEDYQAQFLDFFIDLVTQEVPEAVLIAGDIFDRSIASIRAL 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 L ++ + L ++++ GNHDS + L + V + A + Sbjct: 61 ELMDQALQKLSAL-TQVILIPGNHDSASRLGYGTALY-HDQIKVFSKYSQAGTPVVLE-A 117 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 + PIP+L P + N A+ D Q ++P I Sbjct: 118 DTAVNIYPIPYLEPDLARFEFSDPNADIPVARSHQAVNDAAAQRIFTDL---AERPGIGI 174 Query: 181 ATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPAD----YIALGHIHRAQIIGGMEH-- 234 H G+ S++ RDI +G + + A F Y+A GH+HR Q +G Sbjct: 175 VMAHPFVSGSVISESERDISVGGVQSIGADTFKDPSGKIRYVACGHLHRPQSLGATSDYV 234 Query: 235 VRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLE 294 VRY GSP+P SF E +K + + + G + + +P + + KG LA + Sbjct: 235 VRYSGSPLPFSFSEACDTKSITRLDIT-GSTVEISEIPIPQSYKLCSFKGTLAELEEA-- 291 Query: 295 QWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQR 354 + ++IT + +++ L + + V + Sbjct: 292 ----QLPTENCYYSVQITDPLRPEKLYARVKEKLP-LLMNLQYVETGQITESYRPTDA-- 344 Query: 355 ETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTT-LHTLAGE 397 T+S + E F + ELD +++ +Q ++ L + E Sbjct: 345 -TISSPEITEHFFEQALGRELDATEKALVQEIWEQIRLEEVDNE 387 >UniRef50_C7N5B0 Exonuclease SbcD n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N5B0_SLAHD Length = 381 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 91/397 (22%), Positives = 161/397 (40%), Gaps = 26/397 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M++LH SD H+G+ + + + L +++T + VDA+++AGD++D SP + A Sbjct: 1 MKLLHVSDLHIGKRVHEFPMIEDQRHILAQIVDTIRERDVDALLIAGDIYDKSSPSAEAV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 L++ F+ + + +AGNHDS + + ++A N + A + D Sbjct: 61 ALFDDFLCAVADLNVPCLAVAGNHDSQERIAYASRLLASRNVYLSPVFDGAIDHVTLHDE 120 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 IP+LR +I + +G DY + + + Sbjct: 121 HGPVTFWLIPYLRFSEIKSCFDEFDG------------DYTDAMAKLIGQSGVNPEERNV 168 Query: 181 ATGHLTTV----GASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVR 236 A H +SD+ IG +D A+ F DY+ALGHIHR Q I G + VR Sbjct: 169 ALAHQFVTWQSVQPERSDSEIG-NIGGVDNIDARAFDVFDYVALGHIHRPQRI-GRDTVR 226 Query: 237 YCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQW 296 Y GSP+ S E K + LVT E + + ++G LA +T+ Sbjct: 227 YSGSPLKYSISEAPWPKSMPLVTLGKKGSVDFELVPFKPLHDLREIRGPLADLTSP---D 283 Query: 297 RDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRET 356 + + +L + +T +E D +++ + V L + + A Sbjct: 284 VVGAADAEDYLHVTLTDEEPWIDAMSRLREHYPN--VMRLDYDNAATRSASQAAVSAPGE 341 Query: 357 LSELSVEEVFNRRLALE---ELDESQQQRLQHLFTTT 390 L +S E++F + L ++Q + + T Sbjct: 342 LESMSSEDLFAEFFEMRTGIPLTQAQTDLVHAVLTEC 378 >UniRef50_C6XKD2 Nuclease SbcCD, D subunit n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XKD2_HIRBI Length = 379 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 96/392 (24%), Positives = 171/392 (43%), Gaps = 24/392 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLG+ F S +HQ FLD L + D +I+AGD+FD SPP+ A Sbjct: 1 MKILHTSDWHLGRTFKHASLIDDHQHFLDQLKIVLDQQKPDVLIIAGDIFDRASPPASAV 60 Query: 61 TLYNRFVVNLQ-QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 + + F ++ T L++LAGNHDS + + + + L D Sbjct: 61 SQFEDFQRHVYFNTQTALIILAGNHDSGERVGMNGAFADPKRVLIRGRLQRDEKPLILND 120 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 +P+ ++ +A D Q A + + + Sbjct: 121 EFGEVAFSALPYGEIFSARECF--------EKADIATPADVLNQQVECAKQFVPNGARWV 172 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCG 239 I+ H GAS ++ R + +G ++ A F A Y+ALGH+HR+Q + G EH+RY G Sbjct: 173 IS-AHAFVTGASTTETERSLCVGGIETVSADTFNGAHYVALGHLHRSQKV-GAEHIRYSG 230 Query: 240 SPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDV 299 SP+ +FDE G K + L+T +E+++ + + + + ++G L+ + Q + Sbjct: 231 SPLSFAFDEVGNEKSMTLITLGQSGVENIDLIPIKPLRAVREIRGALSDLEKQTDD---- 286 Query: 300 SQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSE 359 ++ +T L + +++ + P + L R ++ + + L Sbjct: 287 -PNNQDFIHAILTDKGGLVEPMARLRRV---YPNVIALTRENKNEVSGNSTGRANAKLD- 341 Query: 360 LSVEEV---FNRRLALEELDESQQQRLQHLFT 388 + +EV F + + +D +Q L + Sbjct: 342 -NPQEVISEFIQHVRETAIDPDEQSILDNAMN 372 >UniRef50_D0L9F6 Nuclease SbcCD, D subunit n=5 Tax=Actinomycetales RepID=D0L9F6_GORB4 Length = 407 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 86/326 (26%), Positives = 136/326 (41%), Gaps = 14/326 (4%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRI+HTSDWHLG+ F+ + + L L Q DA++VAGDV+D P + A Sbjct: 1 MRIVHTSDWHLGRTFHGVELLDDQRRALAELAAIVGEEQADAVVVAGDVYDRSVPSADAV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 Y+ + + TG +VV +GNHDS L A + + G Q + Sbjct: 61 AAYDEGLAAIAATGAAIVVTSGNHDSATRLGSGSAFAAAGGLHLRTTIGAIDQPVMFDAD 120 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 + IP+L P T+ G+ +L+A + + Sbjct: 121 DGPVAIYGIPYLEPDTARTT-LGVGTARGHAAVLSA-------AMDRIRADAARRSARTV 172 Query: 181 ATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGS 240 H VGA+ + + R I +G ++ PA F DY+ALGH+H Q + + VRY GS Sbjct: 173 VAAHAFVVGAAATGSERSISVGGVETVPAHIFSGVDYVALGHLHSPQQL--TDTVRYSGS 230 Query: 241 PIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVS 300 +P SF E K V +V + V + + ++ LKG L + E Sbjct: 231 LLPYSFGERSHRKSVWVVDLDADGVREVRARELRGVRGLSCLKGTLDELLTASEHAYAEQ 290 Query: 301 QEPPVWLDIEITTDEYLHDIQRKIQA 326 +++ +T D R+++ Sbjct: 291 ----CYVEATLTDTVRPVDAMRRLRE 312 >UniRef50_D1PQD5 Exonuclease SbcD n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQD5_9FIRM Length = 376 Score = 269 bits (687), Expect = 1e-70, Method: Composition-based stats. Identities = 93/394 (23%), Positives = 157/394 (39%), Gaps = 27/394 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ LH +D HLG+ + + L+ +L H V+A+++AGD++D PP+ A Sbjct: 1 MKFLHLADLHLGKRVNGFDLLEDQRFILEQVLALCDEHDVEAVLLAGDIYDAPVPPASAC 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 TL + F+ L ++ +AGNHDS L+ + ++A + AP+ + D Sbjct: 61 TLLDWFLTQLAGRRIPVLAIAGNHDSAERLDFAAGLLAAQGVHLAGRFTGAPRQIVLNDR 120 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 +PF+R + L A Y A A + Sbjct: 121 HGPVEFTLLPFVRAATVR------------HFLPDADLPDYDSAVAAALGACQPAAPRRV 168 Query: 181 ATGHLTTVGA----SKSDAVR-DIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHV 235 H V S + + +GT+D+ A F Y ALGHIHRAQ + G + V Sbjct: 169 LLAHQMVVAGVCPPQLSGSETAPLTVGTVDSIDASRFDGFAYAALGHIHRAQRV-GSDTV 227 Query: 236 RYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQ 295 RY G+P+ DECG K V LV +E ++ L + + M L G LA +T Sbjct: 228 RYAGAPLCYHLDECGTEKSVTLVDLGRRGVEDIQLLPLIPRRAMRHLTGPLAKLT----- 282 Query: 296 WRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRE 355 + + ++ +T L D ++A + R S + + + Sbjct: 283 --EHPTDTGDYIWATLTDPTPLPDAMAALRAAYPNAMRLDYQPRGSAAGPADAALAVRGK 340 Query: 356 TLSELSVEEVFNRRLALEELDESQQQRLQHLFTT 389 +EL + F ++ L + + ++ L Sbjct: 341 PFAELFQD--FFTQMNGRPLTIEEARAVKQLREE 372 >UniRef50_C8P7X3 Exonuclease SbcD n=1 Tax=Lactobacillus antri DSM 16041 RepID=C8P7X3_9LACO Length = 383 Score = 268 bits (685), Expect = 2e-70, Method: Composition-based stats. Identities = 92/393 (23%), Positives = 163/393 (41%), Gaps = 29/393 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR LHT+DWH+G+ S + QA + AQ QVDAI+VAGD++D P A Sbjct: 12 MRFLHTADWHIGKTLNDFSLLEDQQAAFTQIERIAQQAQVDAIVVAGDLYDRSVPSEAAV 71 Query: 61 TLYNRFVVNLQ-QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 T N + L ++ ++GNHDS L+ D A + + + A + +D Sbjct: 72 TELNGMLRQLNLNDHFPVLAISGNHDSAVRLSTGTDWFARSSLYLNTTLAAAFTPVTIKD 131 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 +PF + + + + D ++ A+ K Sbjct: 132 T----QFFLLPFFGIQAVRNYF--------HDDHIKNVNDAMERIVAEMKKSFA-AGKHQ 178 Query: 180 IATGHLTTVGASKS-DAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYC 238 + H G+ ++ D+ I +G L A P DY+ALGH+H + + E V+Y Sbjct: 179 VLVAHFFAAGSQRTADSETLIEVGGLSAVSTAVLAPFDYVALGHLHNRKALNE-ERVKYS 237 Query: 239 GSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRD 298 GSP+ S E + K V LV +V+ + + + +LKG + + Sbjct: 238 GSPLKFSVSEAHQEKGVWLVDTEP---FAVQWVPLQPVHDITLLKGSFRELVTSAKD--- 291 Query: 299 VSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRE-TL 357 + + DIE+T E + D+ K++ + +++ + R+ + R+ L Q++ Sbjct: 292 --KPATDFYDIELTDRERIPDVLNKLRTVYP----KIVSLHRTHQARQLALNRQKQRLAA 345 Query: 358 SELSVEEVFNRRLALEELDESQQQRLQHLFTTT 390 S L + F + +L Q++ + T Sbjct: 346 SPLDLLSDFYSQTTGSKLSSEQRRWAEEALIKT 378 >UniRef50_B6QZR0 Nuclease SbcCD, D subunit n=2 Tax=Alphaproteobacteria RepID=B6QZR0_9RHOB Length = 415 Score = 268 bits (685), Expect = 3e-70, Method: Composition-based stats. Identities = 115/415 (27%), Positives = 192/415 (46%), Gaps = 27/415 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 ++ILHT+DWH+GQ+ SR EHQ F L E + H+VDA++VAGDVFD +P + A Sbjct: 3 LKILHTADWHIGQSLNGWSRTYEHQQFFKELEELIERHEVDALVVAGDVFDNQNPSADAT 62 Query: 61 TLYNRFVVNLQQTGCHL--VVLAGNHDSVATLNESRDIMAFLNTTVVA---------SAG 109 + + ++ HL V+ AGNHD + + + V Sbjct: 63 QMLYEALARFREKRPHLVTVLTAGNHDPAGRVEAPGVLFQKIGVQAVGMVRRHDGLLDLS 122 Query: 110 HAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADAC 169 H L DG A + +PF R D+ + E+ ++ A+ + Y+ A Sbjct: 123 HHLVPLKDSDGAVKAYVLALPFPRATDLPGLS--FSSSEEGSPVVRAVAELYEAAVQQAR 180 Query: 170 KLRGDQPLPIIATGHLTTVGASKSDA-VRDIYIGTLDAFPAQNFP-PADYIALGHIHRAQ 227 + G+ +P+IATGHL G +S+ R I IG A P + FP Y+ALGH+H+ Q Sbjct: 181 EQIGE--MPLIATGHLHVAGGLESEGAERRILIGGEHAMPWEQFPDDLTYVALGHLHKPQ 238 Query: 228 IIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGD-- 285 + G E +RY GSP PLS E V+L++FS+ + S+E L + P LKGD Sbjct: 239 KV-GKETIRYSGSPFPLSVTEQHYKHGVNLLSFSDAGVLSIERLALTRPVPFHRLKGDGG 297 Query: 286 --LASITAQLEQWR---DVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRR 340 L + L+ ++ E ++ +++ ++ ++ + PV V Sbjct: 298 LLLEELVPALDALELDGNLPVEQQPFVHVDLRPQVSAGGLKAEVDQILAEYPVRSAGVSV 357 Query: 341 SREQRERVLASQQRE--TLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHT 393 R++++ V++++ LSE+ +E+F E + + L + + Sbjct: 358 LRQKQQEVVSAEAESLIRLSEIGPDELFKSAFERVHGMEPEAKHLDYFYRAIAEA 412 >UniRef50_A6DE84 Nuclease SbcCD, D subunit n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DE84_9PROT Length = 362 Score = 268 bits (685), Expect = 3e-70, Method: Composition-based stats. Identities = 107/390 (27%), Positives = 203/390 (52%), Gaps = 36/390 (9%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M++LHTSDWHLG F+ R+ E + LD++++T + +VD +++AGD+FD P A Sbjct: 1 MKVLHTSDWHLGNKFFGYDRDDEFELVLDFIIKTIKKEKVDVLLIAGDIFDVYYPSQSAL 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 +Y F++ ++ H+ ++AGNHDS++TL+ +DI+ L+ V++ + ++ Sbjct: 61 KVYYSFLMKVKPYLKHIFIIAGNHDSISTLSAPKDILNALDIKVISGDENVEDMIVN--- 117 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 +P+LR + K +L+ IT +Y++ + + + I Sbjct: 118 VGDVDFLLVPYLREILLREKY-------KNDNLIENITHFYKEIISKSNNKK-------I 163 Query: 181 ATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGS 240 TGHLT + + KS + +DIYIG ++ A+ F ADY+ LGH+HR Q I ++V Y GS Sbjct: 164 LTGHLTALNSKKSGSEKDIYIGKIEGVSAEIFDGADYVGLGHLHRYQEI--KKNVVYSGS 221 Query: 241 PIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVS 300 + +SFDE K V + T K +++P+ + + + GD +I +LE+ Sbjct: 222 ILKMSFDENDDKKLVIIDTDDFSKKV----VDIPIFRQIKTISGDKKTIKNELEKINLSK 277 Query: 301 QEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSEL 360 + +E+ DE + + + ++ L + + +++ S ++ + + + +T+ ++ Sbjct: 278 LK----AFVELIFDETIDNTE--VEELKKEFDN-IEIIKYSYKKESKEINFE--KTIKDI 328 Query: 361 SV----EEVFNRRLALEELDESQQQRLQHL 386 S+ EE+F + EEL + Q L+ L Sbjct: 329 SINAIFEEIFKDSINFEELKDEFMQILEGL 358 >UniRef50_C8WDX4 Nuclease SbcCD, D subunit n=1 Tax=Zymomonas mobilis subsp. mobilis NCIMB 11163 RepID=C8WDX4_ZYMMN Length = 406 Score = 268 bits (684), Expect = 3e-70, Method: Composition-based stats. Identities = 123/413 (29%), Positives = 185/413 (44%), Gaps = 30/413 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHT+DWH+GQ SRE EHQ F D L + T VDA+++AGDVFD +P A+ Sbjct: 1 MRILHTADWHIGQTLNGWSREYEHQVFCDALRDVIVTEGVDALLIAGDVFDGINPSGEAQ 60 Query: 61 TLYNRFVVNLQQTG--CHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP------ 112 L + + +V+ AGNHD L ++ L V+ + Sbjct: 61 RLLYAAIAGFLRANPRLQIVITAGNHDPAQRLEAPEAVLNELGVHVLGTLRRDAADVDLQ 120 Query: 113 -QILPRRD--GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADAC 169 ++P D GT A + +PFLR D+ Q G G + + A +DA Sbjct: 121 RHLIPLCDNTGTVHAHVLAVPFLRQADLPGLQLGATG--GAESAVTAAVRALHLAMSDAA 178 Query: 170 KLRGDQPLPIIATGHLTTVGASKSDA-VRDIYIGTLDAFPAQNFPPA-DYIALGHIHRAQ 227 + + LPIIA GHLT G +S+ R I IG A P FPPA Y+ALGH+HR Q Sbjct: 179 ETQAG-GLPIIAMGHLTCSGGLESEGAERRILIGGEHAVPPDIFPPALSYVALGHLHRPQ 237 Query: 228 IIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGD-- 285 + G VRY GSP P+S E G V L+ +G + +P PM L Sbjct: 238 SLDG-GRVRYSGSPFPMSAAEIGYDHGVTLLDLDDGFAPRH--IPLPRPVPMHRLPATGV 294 Query: 286 --LASITAQLEQW---RDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRR 340 LA + + L + ++ ++ + + D + I + +AL E+LPV + + Sbjct: 295 APLAEVASALNALDLQCETPRDAQPFIYLSLIADRPVTQIAAEAEALIEALPVRLAGLTI 354 Query: 341 SREQRERVLASQQRETLSELSVEEVF---NRRLALEELDESQQQRLQHLFTTT 390 +R + E + L++ S E++F + D + + + Sbjct: 355 ARSEAEGTPETP-PPNLADTSPEDLFLMAFNQSHGVNPDTAHLAAFRDALSEI 406 >UniRef50_A6BHS2 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=A6BHS2_9FIRM Length = 391 Score = 268 bits (684), Expect = 3e-70, Method: Composition-based stats. Identities = 73/398 (18%), Positives = 161/398 (40%), Gaps = 29/398 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ H SD H+G+ + + + + Q L ++ A+ + DAI++AGD++D P + A Sbjct: 5 MKFFHLSDLHIGKQLHRYNLKEDQQVILKEVITYAKELRPDAIVIAGDIYDKSVPSAEAV 64 Query: 61 TLYNRFVVNLQQ--TGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP----QI 114 +++ F+ +L + +++++GNHDS L + +I+ + + + P + Sbjct: 65 NVFDEFLTDLSEITPEIPILIISGNHDSPDRLKYASEILKRHHIYLAGNVPERPEEHIEK 124 Query: 115 LPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGD 174 + D +PF++P + + I + Sbjct: 125 VTLHDAYGEVDFYLLPFMKPAYVKNIFVDGTPETYSDAVKEIIKR----------EKIDY 174 Query: 175 QPLPIIATGHLTTVGASKSDAV----RDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIG 230 + + H VG +G +D + DY+ALGH+H AQ I Sbjct: 175 KDKRNVLVSHQFYVGEKAESPETCDSEVFSVGGIDNVDIGSVKEFDYVALGHLHGAQCI- 233 Query: 231 GMEHVRYCGSPIPLSFDECGKSKYVHLVTFS-NGKLESVENLNVPVTQPMAVLKGDLASI 289 G +RYCG+ + S E ++K + +VT G+ +EN + + + KG L I Sbjct: 234 GKPEIRYCGTLLKYSVSESTQNKSLTVVTLKAKGEKPEIENYPLHPLRDVRKKKGTLDEI 293 Query: 290 TAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVL 349 + + E ++ I +T + + + +++ + + + V R + + Sbjct: 294 IKEFRE-----TEKDDYISITLTDEIDPYKPKEQLERIF--SHILEIRVDNQRTRTKLKE 346 Query: 350 ASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLF 387 ++ + F + + E++ ++ ++ +F Sbjct: 347 MDEELVMKDPFTSFAEFYKEMQGREMNGEEETIMKEIF 384 >UniRef50_C8PYK6 Nuclease SbcCD, D subunit n=2 Tax=Pseudomonadales RepID=C8PYK6_9GAMM Length = 507 Score = 268 bits (684), Expect = 3e-70, Method: Composition-based stats. Identities = 106/297 (35%), Positives = 163/297 (54%), Gaps = 14/297 (4%) Query: 3 ILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYARTL 62 +LHTSDWHLG+ Y K R E + FLDW L+T + +VD +++AGD+FDT +P + A+ L Sbjct: 4 LLHTSDWHLGRRLYGKPRYDEFKQFLDWQLQTLREQKVDVLLIAGDIFDTTAPSNQAQNL 63 Query: 63 YNRFVVNLQQTGC-HLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP----QILPR 117 Y F+ + T C H++++AGNHDS + L + ++ N ++ S P L Sbjct: 64 YYDFLSQVCHTDCRHVIIVAGNHDSASFLEAPKQLLKAFNIHIIGSMTDTPTDEVITLLD 123 Query: 118 RDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYA------DACKL 171 + G P ++ +P+LR RD+ T G +K++ L I +Y Q + Sbjct: 124 KSGQPELIVMAVPYLRDRDVRTVGHGERLDDKERKLAQGIKAHYAQIADIAIAQQAQLQA 183 Query: 172 RGDQPLPIIATGHLTTVGAS--KSDAVRDIYIGTLDAFPAQNF-PPADYIALGHIHRAQI 228 + + +PI+ATGHL TVG + D VRD+Y+G+L + A+ F P DY+ALGH+H Q+ Sbjct: 184 KYKRIIPIVATGHLFTVGGQTMEGDGVRDLYVGSLGSIGAEIFHPQIDYVALGHLHIPQV 243 Query: 229 IGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGD 285 +GG H+RY GSPI + F E + K VHL+ F + L Q ++ Sbjct: 244 VGGQPHIRYAGSPIAMGFGESRQQKQVHLLRFDAKPDLLSQPLQTLTIQKKPLVSAP 300 Score = 97.9 bits (242), Expect = 6e-19, Method: Composition-based stats. Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 2/131 (1%) Query: 269 ENLNVPVTQPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALT 328 ++L VPV QP+ LKGD +I L + Q VWL++ E + D+ KI L Sbjct: 379 QSLPVPVFQPIQTLKGDWQTIKTSLHSLKKAQQ--SVWLEVVYDGQEVVGDLSEKIAELV 436 Query: 329 ESLPVEVLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFT 388 + +EVL ++ +++ + + + + E+L EL+ +VF R L ++ E Q+ L +T Sbjct: 437 KDSRLEVLRIKNQQKRDQVMQSQRMDESLEELNPTQVFERCLIAHQVLEEQKPMLWSRYT 496 Query: 389 TTLHTLAGEHE 399 L +L G + Sbjct: 497 EVLESLQGGQQ 507 >UniRef50_A5WEF9 Nuclease SbcCD, D subunit n=3 Tax=Psychrobacter RepID=A5WEF9_PSYWF Length = 537 Score = 268 bits (684), Expect = 4e-70, Method: Composition-based stats. Identities = 114/285 (40%), Positives = 167/285 (58%), Gaps = 14/285 (4%) Query: 3 ILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYARTL 62 ILHTSDWHLG+ Y + R E +AFL WL +T Q +QVD +IVAGDVFDT +P + A+ L Sbjct: 16 ILHTSDWHLGRRLYGQLRYHEFEAFLAWLTQTLQQYQVDVLIVAGDVFDTMTPSNKAQAL 75 Query: 63 YNRFVVNLQQTGC-HLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGH--APQILPRRD 119 Y F+ + ++ C H+VV+AGNHDS L+ +++ LN V+ +A A ++L D Sbjct: 76 YYEFLGVVSKSHCDHVVVVAGNHDSPTFLDAPANVLKALNVHVIGTACEDVADEVLVLTD 135 Query: 120 GTPGA--VLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRG---- 173 A ++ +P+LR RD+ ++QAG +G +K +LLA I ++Y + A + Sbjct: 136 SQDQAQCIIAAVPYLRDRDVRSAQAGESGADKDANLLAGIHEHYAKVAQVAKAKQAKLIT 195 Query: 174 --DQPLPIIATGHLTTVGASKS--DAVRDIYIGTLDAFPAQNFPP-ADYIALGHIHRAQI 228 + +P+IATGHL G + + D VR++Y+G+L A F DY+ALGH+H Q Sbjct: 196 QQQRHIPLIATGHLFAAGGATTADDGVRELYVGSLGKISADMFDECFDYVALGHLHVPQK 255 Query: 229 IGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNV 273 +GG EH+RY GSPI + F E ++K V LV F V Sbjct: 256 VGGREHIRYSGSPIAMGFGEANQTKQVLLVQFGQNLASDSLKERV 300 Score = 91.3 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 33/140 (23%), Positives = 67/140 (47%), Gaps = 3/140 (2%) Query: 258 VTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYL 317 + + + + VP Q + + GD+ I L+Q + P+W+++ T DE + Sbjct: 396 LHITADNTMQIIAVTVPCFQQLLPISGDINHILQSLQQL---AHTKPIWIEVAYTGDEIV 452 Query: 318 HDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDE 377 D++ +I A P EVL ++ + + + + A ETL +L +VF R L ++ E Sbjct: 453 SDLREQIHAAVAGTPFEVLKIKNHQVRNKVLKAQSTHETLQDLDEMQVFERCLVANKVAE 512 Query: 378 SQQQRLQHLFTTTLHTLAGE 397 SQ+ L+ + ++ + + Sbjct: 513 SQRPSLREAYAQIVYQIHHD 532 >UniRef50_C0W8J2 DsDNA exonuclease subunit n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W8J2_9ACTO Length = 441 Score = 267 bits (682), Expect = 6e-70, Method: Composition-based stats. Identities = 107/452 (23%), Positives = 165/452 (36%), Gaps = 66/452 (14%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHTSDWHLG+ F+ + + H F D L+E + VDA+++AGDV+D PP+ + Sbjct: 1 MRILHTSDWHLGRTFHGRVLDDAHATFADHLVELVEAESVDAVVIAGDVYDRAIPPTDSV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAG-HAPQILPRRD 119 L N + L +V+ GNHDS L + A P I+P D Sbjct: 61 RLLNDTLNRLTDR-TQVVLAPGNHDSAQRLGFGSALFRPSLAVRAQVAEVDQPVIVPDPD 119 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLL-------------------AAITDY 160 G G ++ +P+L P L + A + Sbjct: 120 GGDGLLVYALPYLDPDATRGVLPALLSERTGEVWADPEDSEEPAAGEPAGPPQPARLARS 179 Query: 161 YQQHYADACKLRGDQ----------PLPIIATGHLTTVGASK-SDAVRDIYIGTLDAFPA 209 ++ + A +L G +P++ H VG D+ RDI +G +D+ P+ Sbjct: 180 HEAVVSGALRLVGQDLARRRAASRTRVPVVVMAHAFVVGGQACEDSERDIRVGGVDSVPS 239 Query: 210 QNFP------------PADYIALGHIHRAQII------------GGMEHVRYCGSPIPLS 245 + F DY+ALGH+HR Q I + Y GSP+P S Sbjct: 240 EVFETLGGSAVADSSGGLDYVALGHLHRPQEIHLPQRPSAGSGASARPRLVYSGSPLPFS 299 Query: 246 FDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVSQEPPV 305 F E K LV + + +E + PV + + G + + + Sbjct: 300 FSEAPWPKSSVLVDLTAEGVTRLERIPTPVAHRIETVTGTMEELEGPAFDY-----AVGA 354 Query: 306 WLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSELSVEEV 365 W+ + L R Q EVL + R + + A+ L V Sbjct: 355 WVRAIVRGPLPLGAPARLRQRFG-----EVLAIARQDDGQAPRQAASVTRAADPLEVAHE 409 Query: 366 FNRRLALEELDESQQQRLQHLFTTTLHTLAGE 397 F A E ++Q L + L Sbjct: 410 FLHAAAQSEPTAAEQLVLTQAYEAVLAARRSA 441 >UniRef50_B5IJR3 Exonuclease n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IJR3_9CHRO Length = 402 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 96/396 (24%), Positives = 170/396 (42%), Gaps = 19/396 (4%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 +R+LHTSDWHLG++F+ + +D L+E ++ VD +++AGD++D PP+ A Sbjct: 9 VRLLHTSDWHLGRSFHGHDLLSHQAEAMDRLVELSREAAVDLVVIAGDLYDRAIPPAEAV 68 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASA--GHAPQILPRR 118 L+ V L+Q G +V +AGNHDS ++ ++++ L+ T+ P ++ R Sbjct: 69 RLFTDTVARLRQGGAAVVAIAGNHDSHVRVSVYDELLSALDVTIRGRWQRADEPVLVTPR 128 Query: 119 DGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGD---- 174 G + P+P+L P I+ +E + + + ++R D Sbjct: 129 QGGQAVAVYPLPYLEP--ILDGPELQRLLEPEPEPEGQRLRHPEVTALAVERIRADLARR 186 Query: 175 QPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEH 234 + H G S S++ R++ +G +A P F DY+ALGH+H +Q + G Sbjct: 187 AGTRSVLVAHAFVAGGSSSESERELSVGNAEAVPVSTFAGFDYVALGHLHGSQQLDG-PR 245 Query: 235 VRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLE 294 + Y G+P+ SF E K V LV + VE + + V + + L G+L ++ A Sbjct: 246 LAYSGTPLAYSFSEQHHVKSVRLVELAEDGTPRVEVVPLGVGRALRSLSGELEALLADP- 304 Query: 295 QWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQR 354 + W+ E+T +++ P V L R E + + R Sbjct: 305 ---GLEDSRGAWVRAELTDPLLPPQAMARLRQ---RFPHVVELRHRRAEGDAAGPSERSR 358 Query: 355 ETLSELSVEE---VFNRRLALEELDESQQQRLQHLF 387 + E+ F + + LQ Sbjct: 359 RIRNAQGPEQRMLAFFADQQGRPPRPEEARLLQQAL 394 >UniRef50_C7TAC2 Exonuclease n=15 Tax=Lactobacillus RepID=C7TAC2_LACRG Length = 374 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 79/380 (20%), Positives = 150/380 (39%), Gaps = 24/380 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR LHT+DWH+G+ + QA + L+ A+ QVDAI++AGD++D P A Sbjct: 1 MRFLHTADWHIGKKLNDFDLLEDQQAVFEQLVTVAKQQQVDAIVIAGDLYDRALPSEAAV 60 Query: 61 TLYNRFVVNL-QQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 + +V L ++ L+V++GNHDS L R + V A + D Sbjct: 61 ATLDHMLVTLNRKLNYPLLVISGNHDSAVRLRTGRSWFSTTKMYVNTQLAEAFTPVELGD 120 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 +P+ P + Q + + K + + Sbjct: 121 T----QFFLLPYFEPFAVRDYFQDATITNVAQAIRPIVA---------KMKAQFKPDMRH 167 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCG 239 I H G+ S + + +G LDA P + DY+ALGH+H + ++Y G Sbjct: 168 ILVSHFFAAGSDHSASETKVNVGGLDAVPIDDLAAFDYVALGHLHNHNALHAEPKIQYSG 227 Query: 240 SPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDV 299 + + + E + K V++V + + + + LK A +T Sbjct: 228 ALLKYAVAEAKQEKGVYIVDTD---TMARTFIPLTPQHDLIELKASYAELTDPDFYR--- 281 Query: 300 SQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSE 359 Q+ ++ +++T + + ++ +++ + ++ +RR Q++ L Sbjct: 282 QQDRDAYIGVDLTDTQVIPNVMAQLRKIYP----RIISLRRENGVTAVKPLKQRQRDLDP 337 Query: 360 LSVEEVFNRRLALEELDESQ 379 LS+ + F + +L Q Sbjct: 338 LSLLKNFYAEMMQTDLTADQ 357 >UniRef50_C0EE10 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EE10_9CLOT Length = 379 Score = 265 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 84/390 (21%), Positives = 153/390 (39%), Gaps = 23/390 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+++HTSDWH+G+ S + + FL L + DA+I+AGD++D P + A Sbjct: 1 MKVVHTSDWHIGRTLGGYSLLEDQEYFLKQLAAFLVKQRADALIIAGDLYDRAVPSAQAV 60 Query: 61 TLYNRFVVN-LQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L +RF+ + + Q ++ +AGNHDS L+ S + + + + + Sbjct: 61 ALLDRFLSDVVLQKKIPVLAIAGNHDSPERLSFSNRFLEQGGLYLQGTVEQGVKRVDL-- 118 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 +P+L P + I + A+ ++ K Sbjct: 119 --GQVHFYLLPYLEPAAVRQLFPD-EAIHSFDQAVEAVARHFLYDELSGGKNILISHGFW 175 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCG 239 I S++ R +G DA F DY+ALGH+H Q + RY G Sbjct: 176 INQSDSHENSIQFSESER--SVGGSDAVDLSRFSMFDYVALGHLHAPQQASL--NARYSG 231 Query: 240 SPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDV 299 SP+ S E + K V L+ +++ + P+ + + V++G LA + Sbjct: 232 SPLKYSVSEAKQKKSVTLLDIGENEIKVSAHTFAPL-RDVRVVEGALAEVVKSP------ 284 Query: 300 SQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSE 359 ++ + +T EY D I +L + P + L + ++ + S Sbjct: 285 ---SDDYVFVNLTDREYQLDA---IGSLRGAFPHILGLQYVRIQYNNVASGAEAVLSKSP 338 Query: 360 LSVEEVFNRRLALEELDESQQQRLQHLFTT 389 L + E F + E + Q++ + L Sbjct: 339 LELFEEFYQSSTGEPMQPEQKKLIGQLLDE 368 >UniRef50_D1VPG1 Nuclease SbcCD, D subunit n=1 Tax=Frankia sp. EuI1c RepID=D1VPG1_9ACTO Length = 394 Score = 265 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 99/404 (24%), Positives = 172/404 (42%), Gaps = 17/404 (4%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ LHTSDWH+G++ +SR + +A L ++ A+ ++VDA++VAGDV+D+ +P + A+ Sbjct: 1 MKFLHTSDWHIGKSLKGRSRLDDQEAVLREVVGIARDNEVDAVLVAGDVYDSAAPSAEAQ 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA----PQILP 116 L + ++ Q+TG ++V+AGNHD + R +M T+V + A Sbjct: 61 RLAVQTLLGFQRTGAEVIVIAGNHDHPRSFEAYRPLMGAAGITMVGTPRRADKGGVIAFN 120 Query: 117 RRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQP 176 R + +PFL R I + + Q AA D + A + Sbjct: 121 ARGTGEPVRVAVLPFLSQRFAIRAAELVTQTPAQN---AARYDQVVRDLLTALRSGFSDE 177 Query: 177 LPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFP-PADYIALGHIHRAQIIGGMEHV 235 + HLT G R PA FP A Y+ALGH+HR Q + V Sbjct: 178 AVNLVLAHLTVTGGQLGGGERLAQSIFDYYVPATAFPADAHYVALGHLHRRQTLPAPCPV 237 Query: 236 RYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQ 295 YCGSP+ + F E + V +VT S G S ++ V + + ++G +A + + Sbjct: 238 EYCGSPLAVDFGEQDNTPVVRVVTASPGTPASGVDIPVTTGRRLRTVRGTVAELADGAAE 297 Query: 296 WRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRE 355 + D +L + + ++ + L +L V + + R Sbjct: 298 YGD------AYLRVWVREPARAGLREQVQEVLPNALEVRIDPEFAAAAAAAAAGDRPSRP 351 Query: 356 TLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHE 399 + + E+F+ L + + + R++ LF + G Sbjct: 352 STGQRGPGELFHEYLGSQNVADD---RVERLFARLHDEIVGAER 392 >UniRef50_Q0S486 ATP-dependent dsDNA exonuclease SbcD n=6 Tax=Actinomycetales RepID=Q0S486_RHOSR Length = 394 Score = 265 bits (676), Expect = 3e-69, Method: Composition-based stats. Identities = 100/378 (26%), Positives = 158/378 (41%), Gaps = 12/378 (3%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHTSDWH+G+ F+ + LD + H VD ++V GDV+D P + A Sbjct: 1 MRILHTSDWHIGRTFHGVDLLTDQARVLDAIAALVAEHGVDVVVVPGDVYDRSIPSADAV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 T+ NR ++ G +V +GNHDS A L ++ + + D Sbjct: 61 TVCNRGFEAIRDAGAVIVATSGNHDSAARLGAGAAFSRAGGLHLMTTVAGIGSPVVLDDE 120 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 IP+L P +I +Q + +L A D + + Sbjct: 121 HGPVAFYGIPYLEP-EITRAQLDVPTARSHAEILDAAMDRVCADLD--GRNDTGPRTRSV 177 Query: 181 ATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGS 240 H VGA + + R I +G ++ A F DY+ALGH+H Q + E++RY GS Sbjct: 178 VLAHAFVVGAEATGSERSISVGGVETVSASAFGGVDYVALGHLHSPQTL--AENIRYSGS 235 Query: 241 PIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVS 300 P+P SF E SK V+LV L +VE +++PV + + L G + + + +RD Sbjct: 236 PLPYSFGERTHSKAVYLVDLDADGLRAVERVDLPVVRGLRQLTGTVQELLED-DTFRDA- 293 Query: 301 QEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSEL 360 ++ +T E D R +Q P V L + E + + + S+L Sbjct: 294 --EDCYVSAVLTDPERPVDAMRSLQT---RFPFAVHLEWQRPEGGDDLRYRDKVHGRSDL 348 Query: 361 SVEEVFNRRLALEELDES 378 + F + E Sbjct: 349 QITRSFLTDVRSEPSTGE 366 >UniRef50_D2QSS6 Nuclease SbcCD, D subunit n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QSS6_9SPHI Length = 408 Score = 264 bits (675), Expect = 4e-69, Method: Composition-based stats. Identities = 106/423 (25%), Positives = 163/423 (38%), Gaps = 48/423 (11%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHT+DWHLG+ R E + L +++ A VD ++VAGD+FDT +P A Sbjct: 1 MKILHTADWHLGKRLQDFQRLQEQRDVLAEIVQVANQEDVDLVLVAGDLFDTFNPDPKAE 60 Query: 61 TLYNRFVVNLQQTGCH-LVVLAGNHDSVATLNESRDIMAFLNTTVVA------------- 106 L + L G +V +AGNHD+ + Sbjct: 61 DLLYSTLKELTANGRRTVVAIAGNHDNPDRIEAQDHFGRECGIIFAGFPKTEVRSYELSC 120 Query: 107 -------SAGHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITD 159 + G LPR D ++ P ++ L L + Sbjct: 121 DAKLLCSAPGFIELKLPRHDAPVRIIMTPY---------ANETRLRSYLGMVSLDDELRQ 171 Query: 160 YYQQHYADACKLRGDQPLPIIATGHLTTV--GA---SKSDAVRDI-YIGTLDAFPAQNFP 213 + QH++ D+ + HL + G +SD R I +G P Sbjct: 172 HLHQHWSALADTYMDEQGINLLMAHLFVMKRGGEQPEESDDERSILQVGGASVVYTDMIP 231 Query: 214 P-ADYIALGHIHRAQIIGGME-HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENL 271 P Y ALGH+HR Q I G V Y SP+ SF E + KYV LV G+ +V Sbjct: 232 PQIQYTALGHLHRYQQIAGGPSPVIYSSSPLAYSFAEADQQKYVVLVDAEAGQPVTVT-- 289 Query: 272 NVPVTQPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYL-HDIQRKIQALTES 330 VP+ +L+ + ++ R+ P + +I + T +L D +R++Q ES Sbjct: 290 PVPLATGKRLLRPKFKRVDEAVDWLRE---NPNCYAEITLQTPTFLTSDERRQLQQAHES 346 Query: 331 LPVEVLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTT 390 L + VR E + + +E +F + + +RLQHLF Sbjct: 347 LVTIIPDVRDVEETEQETAPAIDLSQP----MEALFTSYFKNKNKGQEPNERLQHLFKEI 402 Query: 391 LHT 393 L T Sbjct: 403 LAT 405 >UniRef50_B8D1T4 Exodeoxyribonuclease I subunit D n=3 Tax=Clostridia RepID=B8D1T4_HALOH Length = 435 Score = 264 bits (674), Expect = 5e-69, Method: Composition-based stats. Identities = 92/419 (21%), Positives = 180/419 (42%), Gaps = 35/419 (8%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 +RILHT+DWHLG++ SR E + F++ ++E A ++VD +++ GD+FDT +PP+ A Sbjct: 27 LRILHTADWHLGKHLEGWSRYEEQKEFVEEIIEIADDNKVDMVLICGDIFDTTNPPAEAE 86 Query: 61 TLYNRFVVNLQQTGCHLV-VLAGNHDSVATLNESRDIMAFLNTTVVASAG------HAPQ 113 L+ + + L + G ++ +++GNHDS L + + ++ + Sbjct: 87 QLFFQAMDYLSKGGERVICLISGNHDSPNRLMAPGPLASRQGIFIMDEPRGDRYKLDDDR 146 Query: 114 ILPRRDG-------TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYA 166 +L R G G VL +P+ + + + + + + Q ++ Sbjct: 147 VLNRGQGYIELEINGEGVVLTALPYPSESRLNQVFSWTG---DDRAVQESYSRRVGQIFS 203 Query: 167 DACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPP-ADYIALGHIHR 225 + + + IA HL G + + R I +G ++ P + Y ALGH+HR Sbjct: 204 HLEQYYRENTI-NIAMSHLFVAGGQTTRSERPIQVGGSLTVLPEHLPEKSQYTALGHLHR 262 Query: 226 AQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGD 285 QI Y GSP+ S E K V+LV G+ +E + + +P+ V + Sbjct: 263 YQIASSARRAYYSGSPLQYSLSEKDHKKCVNLVELHPGEEARIEQVELTTKKPIEVWE-- 320 Query: 286 LASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQR 345 A + + + +++ VW + I D+ L + K + + + + + Sbjct: 321 -AEGVEEAIKMVEANKDRSVWAYLYINVDKTLLQSEIKKIKEIKKDILCINPITPEEKYE 379 Query: 346 ERVLASQQRETLSELSVEEVF---NRRLALEELDESQQQRLQHLFTTTLHTL--AGEHE 399 + +L + E+F R+ E D+ + +F++ ++ GEH+ Sbjct: 380 WETIKMPD----EDLDIMELFKEYYRKTKKVEPDDD----IIRMFSSIVNDTREKGEHD 430 >UniRef50_Q49XE0 Nuclease sbcCD subunit D n=12 Tax=Staphylococcus RepID=SBCD_STAS1 Length = 376 Score = 263 bits (673), Expect = 6e-69, Method: Composition-based stats. Identities = 86/396 (21%), Positives = 164/396 (41%), Gaps = 26/396 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+I+HT+DWHLG+ KS + LD +E + Q D I++AGD++DT P A Sbjct: 1 MKIIHTADWHLGRILNGKSLLEDQAYILDKFIEAMKLEQPDVIVIAGDLYDTSYPNKDAI 60 Query: 61 TLYNRFVVNLQ-QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L + + L + L+++ GNHDS LN + + + + Sbjct: 61 QLLEQTIDILNLEMSIPLIMINGNHDSKERLNYGSKWFEKSHMYIRTDLNDMNKPVTI-- 118 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 +PF ++ IE Q L + Y + D+ Sbjct: 119 --GNVDFYTMPFATINEM-QYFFDDKAIETHQQALNRVLAYMHEVI--------DENKVN 167 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCG 239 I GHLT G +S++ R + IGT+++ F D + LGH+H I + Y G Sbjct: 168 IFVGHLTVQGGIRSESERPLTIGTVESVDENLFNQFDRVMLGHLHHPFSI-ESNFINYSG 226 Query: 240 SPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLAS-ITAQLEQWRD 298 S + SF E + K +V N K+ + + + + + V++G+ I +LE Sbjct: 227 SLLQYSFSETKQPKGYKIVEIKNQKITD-KFIPLKPLRQLEVIEGNYEDAIQEKLE---- 281 Query: 299 VSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQ-QRETL 357 + +L ++ +++ + + L + P + L ++ + + + + L Sbjct: 282 -VKHKENYLHFKL---KHMSHVSDPMMHLKQIYPNTLALTNQTFDFNTSIHHENIEIQKL 337 Query: 358 SELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHT 393 + ++ + F + E L +Q ++++ + T L Sbjct: 338 DDETIIDNFYNSITGEHLTTNQSKKIEKIMTALLEE 373 >UniRef50_C2M1T3 Nuclease SbcCD, D subunit n=3 Tax=Bacteroidetes RepID=C2M1T3_CAPGI Length = 409 Score = 263 bits (672), Expect = 7e-69, Method: Composition-based stats. Identities = 94/411 (22%), Positives = 166/411 (40%), Gaps = 25/411 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHT+DWHLG+ SR E +A ++ +++ A +VD +IVAGD+FD +P + A Sbjct: 3 MKILHTADWHLGKRLDRFSRIEEQRAVMEEIVQIANDQKVDMVIVAGDLFDNFTPNTDAV 62 Query: 61 TLYNRFVVNLQ-QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASA--------GHA 111 L+ + + L + +V ++GNHDS ++ + ++ Sbjct: 63 ELFYKTLKQLSCEGKRPIVAISGNHDSPKLIDAPDPLARECGIFLIGYPNAIVSPIKAET 122 Query: 112 PQILPRRDGTPGAVLCPIPF-LRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACK 170 +I +G P+ LR + E + +++ + Sbjct: 123 FEITTSEEGFLEFCFEKYPYPLRILHTPYANEPRLKQELEGDKQVSLSQLLSDKWHFLAN 182 Query: 171 LRGDQPLPIIATGHLTTVGA-----SKSDAVRDIYIGTLDAFPAQNFPP-ADYIALGHIH 224 D I T HL + + R I IG D PP Y ALGH+H Sbjct: 183 TYCDSSGVNILTAHLFMQPKNGETLEEPEGERPIRIGNADMIYTDTIPPQIQYTALGHLH 242 Query: 225 RAQIIGGME-HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLK 283 + IG E V Y SP+ SF E G+ KYV +V + + S E + + +P+A + Sbjct: 243 GFKNIGSEENPVVYASSPLSYSFSEAGQQKYVVVVEVTPDQRPSFEKIPLTQGKPLA--R 300 Query: 284 GDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRK-IQALTESLPVEVLLVRRSR 342 ++ LE R+ P W+++ + EYL +RK + + E + + + Sbjct: 301 KSFDNVPLALEWLRE---NPNTWVELTLELKEYLKAQERKQLYSTHEGIVFLIPKISWEL 357 Query: 343 EQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHT 393 + S Q ++ +F + + + + LF ++T Sbjct: 358 GKSPSGELSLQDINFENITP--LFESYFKYKNSGIAPNKEILDLFNEVINT 406 >UniRef50_D1BIQ6 Exodeoxyribonuclease I subunit D n=2 Tax=Actinobacteria (class) RepID=D1BIQ6_SANKS Length = 394 Score = 263 bits (672), Expect = 8e-69, Method: Composition-based stats. Identities = 106/397 (26%), Positives = 164/397 (41%), Gaps = 19/397 (4%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHTSDWHLG+ + A+LD L+E ++ VDA++VAGDV+D PP A Sbjct: 1 MRILHTSDWHLGRTLHGVDLLDHQAAYLDHLVELVRSESVDAVVVAGDVYDRAIPPVEAV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGH--APQILPRR 118 TL + + L + +VV GNHDS L ++ V A P L Sbjct: 61 TLLSTALARLAEI-TQVVVTPGNHDSATRLGFGAEL-WREGVHVRARVADIGRPVELETT 118 Query: 119 DGTPGAVLCPIPFLRP---RDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQ 175 DG P A++ +P+L P R ++ + + + A + A + Sbjct: 119 DGAP-ALVYALPYLDPDAARTVLREEDEPPLARSHEAVTGAAMRRVRADLAARGATVSAR 177 Query: 176 PLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQII--GGME 233 P ++ H VG S++ RDI +G +D PA DY+ALGH+H AQ + GG Sbjct: 178 PRSLV-VAHAFVVGGEASESERDIRVGGVDTVPAAVLEGVDYVALGHLHGAQRVATGGGT 236 Query: 234 HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLE-SVENLNVPVTQPMAVLKGDLASITAQ 292 RY GSP+ SF E + K LV + + + PV + ++ + G L + Sbjct: 237 VGRYSGSPLAYSFSEMRQRKSTALVDLGPDGVVGEPQLVPAPVPRRLSEVSGSLDDLLGA 296 Query: 293 LEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQ 352 W+ + +T ++ +++A V + R L Sbjct: 297 -----AGEAHVDDWVRVTVTDPARPREMNARLKARFP--HVLAMAHRPPERSARESLTLA 349 Query: 353 QRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTT 389 L V F + + D + L+H F T Sbjct: 350 VTTASDPLVVAADFVAHVTGAQPDVRESAALRHAFET 386 >UniRef50_A1ZGU7 DNA repair exonuclease n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZGU7_9SPHI Length = 405 Score = 263 bits (672), Expect = 9e-69, Method: Composition-based stats. Identities = 90/412 (21%), Positives = 164/412 (39%), Gaps = 32/412 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHT+DWHLG+ + +R E + L+ + + A VD +IVAGD++DT +P + A Sbjct: 1 MKILHTADWHLGKKLETYTRLPEQEEVLNEICQIADREAVDVVIVAGDLYDTFNPTNDAI 60 Query: 61 TLYNRFVVNLQQTGC-HLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 TL+ + + + + G ++ +AGNHDS + + ++ Sbjct: 61 TLFYKTLKRISKNGTRPVIAIAGNHDSPDRIEAPDPLAKECGIVLLGFPHSEVSPFKLDT 120 Query: 120 G------TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHL-----LAAITDYYQQHYADA 168 G G + +P + N + + L + + QQ + Sbjct: 121 GLGVTKSEQGFLEMKVPGHDAPLRLIVTPYANELRLKAFLGLTDKEGELRNLLQQRWQQL 180 Query: 169 CKLRGDQPLPIIATGHLTTV--GAS---KSDAVRDI-YIGTLDAFPAQNFP-PADYIALG 221 + + HL + G + ++ + I +IG + P Y+ALG Sbjct: 181 ADAHCNAQGINMLVAHLFMMKKGGEAPVEDESEKSILHIGGAQQIYTEQVPSQMQYVALG 240 Query: 222 HIHRAQIIGGME-HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMA 280 H+HR Q I G V Y SP+ SF E ++KYV ++ GK V + + + + Sbjct: 241 HLHRYQNISGAPCPVVYSSSPLAYSFAEANQTKYVAIIEAEPGKPVEVNRIALEKGKKL- 299 Query: 281 VLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRK-IQALTESLPVEVLLVR 339 L+G + +E ++ ++I I TD YL +RK + + + V+ Sbjct: 300 -LRGRFDEMDKAVEWLKE---NQNALVEITIVTDHYLTAKERKTLNEHHSGIIAIIPDVK 355 Query: 340 RSRE-QRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTT 390 ++ + + + +L F + D+ RL LF Sbjct: 356 NKNPNLSDKASSIDTSKHIDDL-----FRDYFKSKNNDQEPNDRLMDLFREV 402 >UniRef50_B2GFI3 Nuclease SbcCD subunit D n=1 Tax=Kocuria rhizophila DC2201 RepID=B2GFI3_KOCRD Length = 407 Score = 263 bits (672), Expect = 9e-69, Method: Composition-based stats. Identities = 100/412 (24%), Positives = 161/412 (39%), Gaps = 42/412 (10%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M +LHTSDWHLG+ F+ + ++ + + V ++V+GDV+D P + Sbjct: 1 MLMLHTSDWHLGRTFHGVDILDVQARAMTEIVAWVREYDVSVVLVSGDVYDRAQPRTEVV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA--PQILPRR 118 L NR + +++ G +V+ +GNHDS A L IM+ ++ + A P + +R Sbjct: 61 ELLNRTLGEIREAGAQVVLTSGNHDSPARLGFGSQIMSHGGVHLLTTLEDAWRPALFTQR 120 Query: 119 DG------------------------TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLL 154 DG + IP+L PR + L+ Q +L Sbjct: 121 DGRLTVSRGAVPAGEPSAGSPVAAAEDTTVAVYGIPYLEPR---AAAPLLDCAPTHQGVL 177 Query: 155 AAITDYYQQHYADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPP 214 A+T A R +P + H GA +D+ R + G L A+ F Sbjct: 178 GAVT-------ARIDDARNRPGVPTVVMAHAFVTGAEPTDSERVVDSGGLGTASAEIFAG 230 Query: 215 ADYIALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVP 274 DY ALGH+HR Q + +E VRY GSP+ SF E SK LV + + V L+ Sbjct: 231 HDYTALGHLHRRQRV--IETVRYSGSPVAYSFSEAEHSKGAWLVDVRSDGVHGVTPLDHA 288 Query: 275 VTQPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVE 334 +A L+G L ++ + E R W + +T E +++ Sbjct: 289 SGMRLARLRGQLDALLTEPEHTRA----QDAWCQVVLTDAERPAAAMERVRTRFPHTVEL 344 Query: 335 VLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHL 386 SR +++ S + F + L S+ L Sbjct: 345 RWEPEGSRAATPLGYSARVAGVASPGELCARFYDHVRGRSLSPSEAAELDDA 396 >UniRef50_A6TVN1 Nuclease SbcCD, D subunit n=6 Tax=Clostridiaceae RepID=A6TVN1_ALKMQ Length = 406 Score = 263 bits (672), Expect = 9e-69, Method: Composition-based stats. Identities = 100/421 (23%), Positives = 179/421 (42%), Gaps = 38/421 (9%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLG+ SR AE + FL+ L+ ++D I+VAGD++DT +PP+ A Sbjct: 1 MKILHTSDWHLGKTLEGNSRLAEQERFLEELVTIVNEKEIDLILVAGDIYDTSNPPAQAE 60 Query: 61 TLYNRFVVNLQQTGC-HLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQI----- 114 L+ V L G ++++AGNHD+ L + + ++ +I Sbjct: 61 RLFYDSVKKLSANGQRPIIIVAGNHDNPDRLVAASPLAYEHGVVLLGKPKSIVEIGKYGT 120 Query: 115 ----------LPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQH 164 L V+ +P+ + + + + ++ +A + Sbjct: 121 FEIVDSGEGFLEIDLKGERVVILTLPYPSEQRLNELLSEELAEDARRKSYSARIGEIFSN 180 Query: 165 YADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPP-ADYIALGHI 223 ++ + + +A HL +G + + R I +G A + P A Y+ALGH+ Sbjct: 181 LSEKHR----EDTINLAISHLFVMGGEEVGSERPIQLGGSLTVDANHLPQRAHYVALGHL 236 Query: 224 HRAQIIGGMEHV--RYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAV 281 H+ Q + G + Y GSPI S E SK V++V + G VE + + +P+ V Sbjct: 237 HKPQKVVGSGKIKAYYSGSPIEYSKKEVHYSKSVYVVEVNLGLDTKVEEVYLKNYKPIEV 296 Query: 282 LKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRS 341 K I L + + E +W+ +EI TD + Q +I+ + + P ++ ++ Sbjct: 297 WK--CKGIKEALIRCEEDG-ERDIWVYLEIQTDRVMT--QSEIKEMKKLRP-HIVEIKPV 350 Query: 342 REQRERVLASQQRETLSELSVEEVFNRRL---ALEELDESQQQRLQHLFTTTLHTLAGEH 398 ++ +R + T + +E++F E L LF+ E Sbjct: 351 FQEMDREEEELEDMTT--MRIEDLFKDYYIYKNGVHPTEE----LMDLFSEIAQGEGDED 404 Query: 399 E 399 E Sbjct: 405 E 405 >UniRef50_C9KJP5 Exonuclease n=3 Tax=Veillonellaceae RepID=C9KJP5_9FIRM Length = 367 Score = 263 bits (672), Expect = 9e-69, Method: Composition-based stats. Identities = 77/382 (20%), Positives = 152/382 (39%), Gaps = 22/382 (5%) Query: 20 REAEHQAFL-DWLLETAQTHQVDAIIVAGDVFDTGSPPSYARTLYNRFVVNLQQTGCHLV 78 A+ + + ++ + V+A+I+AGD++D G PP A L++ F++ + + Sbjct: 3 LTADQREIIMGQIVPFVREEGVEAVIIAGDIYDRGVPPVEAVDLFDEFLMKMAGLRVKVF 62 Query: 79 VLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDGTPGAVLCPIPFLRPRDII 138 +AGNHDS + LN +M A + D + P++ P + Sbjct: 63 YIAGNHDSESRLNFGSRLMREAGIFARGRLDAAMAPIIVEDDFDPVAIYLYPYMEPASVK 122 Query: 139 TSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPIIATGHLTTVGASKSDAVRD 198 + ++ ++ + + + + IA H G + SD+ R Sbjct: 123 AAFGVTEALDFEKA---------HELVIEKSLTGAPEKMRSIAVAHAFLAGGTSSDSERP 173 Query: 199 IYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLV 258 + +G F P Y ALGH+H Q G + +RY GS + SFDE + K LV Sbjct: 174 LAVGGSSNIRPGIFRPFCYTALGHLHNPQR-AGADTIRYSGSLMKYSFDEAEQKKGFFLV 232 Query: 259 TFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLH 318 + + + + ++G A I R + ++++E+ + Sbjct: 233 DLDGSGKVEQKFVPLVPPHDIRRVRGLFADIEGD----RAAYPQSDDYIEVELLDRGIIL 288 Query: 319 DIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSELSVEEVFNRR---LALEEL 375 D+ K++A+ + ++ V QRE + Q+ + + +L+ E +F++ + E+L Sbjct: 289 DVFNKLKAIYPN----LMHVLYPNLQREGTMREQEGQAVLKLTEETLFSQYYEDMTGEKL 344 Query: 376 DESQQQRLQHLFTTTLHTLAGE 397 E QQ + Sbjct: 345 GEEQQAIVHGCLQEIYREERDA 366 >UniRef50_Q5LYZ3 ATP-dependent dsDNA exonuclease n=8 Tax=Bacteria RepID=Q5LYZ3_STRT1 Length = 408 Score = 263 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 86/408 (21%), Positives = 162/408 (39%), Gaps = 29/408 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ LHTSDWH+G+ S E + +++ A + +VD +I++GD++D PP A Sbjct: 7 MKFLHTSDWHVGRTLNGWSLLEEQEWAFQQIVDLAISEKVDGVIISGDLYDRAVPPVDAI 66 Query: 61 TLYNRFVVNL-QQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L+N+ + L + + ++GNHD L+ RD + A + + + Sbjct: 67 KLFNKTLARLVLEEQIPVYAISGNHDGAERLHFGRDFFQHQGLHLSTRLEEAFEPIELEN 126 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 + +PF+ P D G E + I D D K D Sbjct: 127 ----CQIFLLPFIDPIDARIYYKDDEGKE-----IQGIGDALTYILEDMEKAF-DPDKAH 176 Query: 180 IATGHLTTVGASKSD---------AVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIG 230 + H SD + +G L + F DY+ALGHIH Sbjct: 177 VLVTHFAVSKKDDSDGQGLRELMLSETSNTVGGLTNVTSDLFKSFDYVALGHIHTR-FAS 235 Query: 231 GMEHVRYCGSPIPLSFDECGKS--KYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLAS 288 + V+Y GSP+ + E + K V+++ S + V +P+ L+ + Sbjct: 236 PTKRVQYSGSPVAFNVKEAKRKEEKGVYILELDASGDMSQTFHTLEVKRPIVALQESFET 295 Query: 289 ITAQLEQWRDVSQEPPVWLDIEITTDEYLH--DIQRKIQALTESLPVEVLLVRRSREQRE 346 + + Q+ DI++++ + L +++ +++ + + VE+ R + E Sbjct: 296 LMSPEFYKNQPCQKAWFAFDIQLSSRKELEGINVRARLEEIYGTDIVEITFSRLGDVREE 355 Query: 347 RVLASQQRETLSELSVEEV---FNRRLALEE-LDESQQQRLQHLFTTT 390 + Q + L S +E+ F + + + L E Q ++ +F Sbjct: 356 NLTVDQHLKDLEMQSPQEIVFDFYQTVTGGDVLSERQTALVESVFEEI 403 >UniRef50_Q67MD2 DNA repair exonuclease n=1 Tax=Symbiobacterium thermophilum RepID=Q67MD2_SYMTH Length = 411 Score = 263 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 117/424 (27%), Positives = 183/424 (43%), Gaps = 37/424 (8%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHT+DWHLG+ +SR+ EH+AF+D L + ++D +++AGDVFDTG+P + A Sbjct: 1 MRILHTADWHLGRTLEGRSRQEEHEAFVDELCAMVREERIDLVLIAGDVFDTGNPSAAAE 60 Query: 61 TLYNRFVVNLQQTGCH-LVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQI----- 114 LY + L + G +VV+AGNHDS L + + T+ P + Sbjct: 61 ELYCDALARLGENGRRAVVVIAGNHDSPDRLTAVQALAQRHGATMFGYPYDDPGVYTPGP 120 Query: 115 --------------LPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDY 160 L AV+ +P+ + A G E+ L + +D Sbjct: 121 DRVQRVAAGPGWAELTVPGVDHSAVVLALPYPSESRLRKLIADTLGEEE---LQRSYSDQ 177 Query: 161 YQQHYADACKLRGDQPLPIIATGHLTTVGASKSD-AVRDIYIGTLDAFPAQNFPP-ADYI 218 + A A + ++ T HL G +SD R I +G P A Y+ Sbjct: 178 VKGWLAAAAGRFRPDAVRLV-TSHLYMAGGVESDVVERPIQMGGAYTVHPCAVPETAQYV 236 Query: 219 ALGHIHRAQIIGGMEHV-RYCGSPIPLSFDECGKSKYVHLVTFSN-GKLESVENLNVPVT 276 ALGH+HR Q I G V RY GSPI SF+E G K V +V V ++ + Sbjct: 237 ALGHLHRPQEIHGTAAVTRYSGSPISFSFNETGYVKGVTVVEVEPRDPAPRVRHVPISAG 296 Query: 277 QPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVL 336 +P+ ++ AQ+E+W ++P W+ +E+ T+ L ++ L P E + Sbjct: 297 RPL--VRWVAEDGLAQVERWVAEGKDPTAWISLEVHTEHPLT--LEQVHRLRAMRP-EFV 351 Query: 337 LVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAG 396 +R A+ + + L V+E F R + L LF ++ Sbjct: 352 HIRAVLPAEAEAAATAEPQR---LGVDEQFVRFYSQVRGGP-PAPELVRLFLELVNARDE 407 Query: 397 EHEA 400 E +A Sbjct: 408 EVDA 411 >UniRef50_D1ADM3 Nuclease SbcCD, D subunit n=2 Tax=Actinomycetales RepID=D1ADM3_THECD Length = 390 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 113/399 (28%), Positives = 172/399 (43%), Gaps = 22/399 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHT+DWH+G+ ++R EH+A L L+E A+ VDA+IVAGDVFDT +P ++ Sbjct: 1 MKILHTADWHVGKVLRGRARADEHRAVLKELVELARAEDVDAVIVAGDVFDTSAPTPPSQ 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPR--- 117 L + ++ L++ G +VVLAGNHD L+ R ++ L VV Sbjct: 61 ALVMQTLLALREGGRQVVVLAGNHDDPRLLDVWRPVLGALGVHVVGRFRRPDDGGVLSWT 120 Query: 118 RDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPL 177 L +PFL R ++ + L Q + + + Q A G + Sbjct: 121 TRAGEDVRLAVMPFLSHRFVVRAVEALTDTPDQHN--RSYAARFAQLAAALTAGFGGDTV 178 Query: 178 PIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPP-ADYIALGHIHRAQIIGGMEHVR 236 ++A H T G R+ F A FPP Y ALGH+HR Q + G + Sbjct: 179 NLVA-AHGTLPGGKLGGGEREAQTIFSYYFEATAFPPTVQYAALGHLHRRQQMPGPCPIW 237 Query: 237 YCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQW 296 Y G+PI + F E S LVT G+ V + + + + + G L + AQ E Sbjct: 238 YSGAPIAVDFGEEHNSPGALLVTVEPGRPAQVREVTLASPRSLRTVNGSLEELEAQAESL 297 Query: 297 RDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEV-LLVRRSREQRERVLASQQRE 355 +D WL + + R Q L +L V+V R + +RE A++ Sbjct: 298 QD------AWLRVVVAEKPRAGLADRVRQILPNALTVDVDERFRPTAARREGGGAARAAR 351 Query: 356 TLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTL 394 + E+F LA D+ R+ LF + Sbjct: 352 -----TPRELFRDYLAQTGRDD---PRVIALFDRLHDEV 382 >UniRef50_O68033 Nuclease sbcCD subunit D n=1 Tax=Rhodobacter capsulatus RepID=SBCD_RHOCA Length = 405 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 127/412 (30%), Positives = 188/412 (45%), Gaps = 29/412 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHT+DWH+GQ SREAEH+AFL L E QVDA++VAGDVFD +P A+ Sbjct: 1 MRILHTADWHIGQTLNGWSREAEHRAFLADLGEILLAEQVDALLVAGDVFDGLNPSGEAQ 60 Query: 61 TLYNRFVVNLQQTG--CHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP------ 112 L + + +V+ +GNHD L ++ L V+ + P Sbjct: 61 RLLYAALAGYVRANPRLQIVLTSGNHDPAQRLEAPEAVLRELGVHVLGTLSRGPGGMDLD 120 Query: 113 -QILPRRD--GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADAC 169 ++P RD G A + +PFLR D+ + G + + AA+ + A A Sbjct: 121 RHLIPLRDRAGQIRAQVLALPFLRQADLPGLRLGAEE-GTEGAVTAALRALLAETVARAA 179 Query: 170 KLRGDQPLPIIATGHLTTVGASKS-DAVRDIYIGTLDAFPAQNFPPA-DYIALGHIHRAQ 227 + G LP+IA HLT G +S A R I IG A P FPPA ++ALGH+HR Q Sbjct: 180 AIAG--TLPLIAMAHLTCAGGLESAGAERRILIGGDHAVPPDVFPPALAHVALGHLHRPQ 237 Query: 228 IIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLK---- 283 + G VRY G+P PLS E G V L+ + G + +P PM L Sbjct: 238 SLDG-GRVRYSGAPFPLSASEIGYDHGVTLLDLAGGAAPRH--IPLPRPVPMLRLPAQGT 294 Query: 284 GDLASITAQLEQ--WRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRS 341 L I A L++ D + +L + + D + +I + A E+LP+ + + + Sbjct: 295 APLPEILAALDRLALPDRPRAEGPFLYLALRADRPVTEITAALDAALEALPLRLAGLTIT 354 Query: 342 REQRERVLASQQRETLSELSVEEVF---NRRLALEELDESQQQRLQHLFTTT 390 R + R A+ + L+ + E +F R L E + + + Sbjct: 355 RPETARPAAAP-PQDLTRTTPEALFAAAFRDLHGTEPETRHLSAFRDALSEV 405 >UniRef50_A5ZTK8 Putative uncharacterized protein n=3 Tax=Firmicutes RepID=A5ZTK8_9FIRM Length = 405 Score = 262 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 93/413 (22%), Positives = 174/413 (42%), Gaps = 50/413 (12%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ H SD H+G ++ + + LD + E A+ + DA+++AGD++D P + A Sbjct: 24 MKFFHLSDLHIGLKLMNRDLREDQEYILDEITELARRKRPDAVVIAGDIYDKAVPSAEAV 83 Query: 61 TLYNRFVVNLQQT--GCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP----QI 114 +++ F+V L + +++++GNHDS +N R +++ N +V + Sbjct: 84 EVFDHFLVGLTEAVPDAVIMMISGNHDSAPRVNCFRKVLSGQNIYMVGQPPRTESEYIEK 143 Query: 115 LPRRDGTPGAVLCPIPFLRP---RDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 + D +PF++P + ++ N + + L I + Sbjct: 144 VTLNDAYGEVNFYLLPFVKPSMVKQVVGVDENGNNLSYNETLHRLIG-----------RE 192 Query: 172 RGDQPLPIIATGHLTT--VGASKSDAVRDIY----IGTLDAFPAQNFPPADYIALGHIHR 225 + + + H G + D R +G +D A DY+ALGHIH+ Sbjct: 193 KINSDERNVLVSHQFYLPSGKNAEDVERMDSEMRTVGNIDEVSADVLEKFDYVALGHIHK 252 Query: 226 AQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGD 285 + G E RYCG+P+ S E + K + +V L + + + V+KG Sbjct: 253 PMKV-GSELYRYCGTPLACSVSEAQQQKGIIMVEMGVKGEIKTTILPLEPLRQVKVVKGT 311 Query: 286 LASITAQLEQWRDVSQEPPVWLDIEITTDEYLH--DIQRKIQALTESLPVEVLLVRRSRE 343 L + E +D ++ + +T L D+Q +I+ + +L +RR + Sbjct: 312 LEEVLK--ESCKD-------YVTVILTDKVDLDVIDMQERIRLAFPN----LLEIRRENQ 358 Query: 344 QRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAG 396 ++ + Q E L L E+ L++LDE ++ LQ LHT+ G Sbjct: 359 RKTDYTRTLQTEEL--LDPYEL--CCSFLKDLDEEEKMILQD----VLHTVQG 403 >UniRef50_C4FEI0 Putative uncharacterized protein n=1 Tax=Bifidobacterium angulatum DSM 20098 RepID=C4FEI0_9BIFI Length = 487 Score = 262 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 100/441 (22%), Positives = 159/441 (36%), Gaps = 53/441 (12%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 +R+LHTSDWH+G+ F + L WL + VD + VAGDV+D+ P + A Sbjct: 21 IRVLHTSDWHIGRRFKGVDLLEYQRKALQWLANLIDSEHVDVLCVAGDVYDSPRPSTEAV 80 Query: 61 TLYNRFVVNLQQTGC-----HLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQIL 115 L+N L + ++ GNHDS L +M N + + + Sbjct: 81 RLFNDIFAMLGRMEVNGHPLEIIFTPGNHDSADRLGTGAALMRP-NVHMRCDIETIDEPV 139 Query: 116 PRRDGTPGAVLCPIPFLRPRDII-----------TSQAGLNGIEKQQHLLAAITDYYQQH 164 G + +P+L P + E+ + A I ++ Sbjct: 140 LIGIGGEQLAVYALPYLDPDLSRPVLQSMLDERGGALGAYGEQERDEDGHARIARSHEGV 199 Query: 165 YADACKL---------RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNF--P 213 A +L R L I H GA D+ R+I +G +D+ PA F Sbjct: 200 MKAAMQLIVNDLAERRRRRPALAAILMAHAFVSGAQSCDSERNISVGGVDSVPAALFSNS 259 Query: 214 PADYIALGHIHRAQII--------------GGMEHVRYCGSPIPLSFDE------CGKSK 253 DY+ALGH+HR Q + RY GS + SF E G K Sbjct: 260 GLDYLALGHLHRPQSVTIAQSDSDESIFHQSRTPQARYSGSLLAYSFSESRTPPVEGNGK 319 Query: 254 YVHLVTFSNGKLESVENLNVPVTQPMAVLKGD--LASITAQLEQWRDVSQEP--PVWLDI 309 V L+ + + + V G+ A I L++ + W+ I Sbjct: 320 SVVLLDVDAASAPKTGGNALGDVRVVDVASGEPAFAQIEGDLDKVLGPLADAYGDDWVSI 379 Query: 310 EITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSELSVEEVFNRR 369 + EY H + +KI A +E V R + + R + E+ V F R Sbjct: 380 TVHLQEYPHGLYQKIDARYAH-ALEKNPVYDRRSSAPAHVMADMRSAVDEMDVLAGFVRY 438 Query: 370 LALEELDESQQQRLQHLFTTT 390 E+ + +++ L+ Sbjct: 439 SLGREVRDDEREVLRTAVEAV 459 >UniRef50_D2MLP9 Exonuclease SbcCD, D subunit n=1 Tax=Bulleidia extructa W1219 RepID=D2MLP9_9FIRM Length = 376 Score = 261 bits (666), Expect = 4e-68, Method: Composition-based stats. Identities = 82/392 (20%), Positives = 161/392 (41%), Gaps = 25/392 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ H D HLG+ S + + LD +L ++H+VD +++AGD++D P S A Sbjct: 1 MKFAHIGDLHLGKILNGHSLLEDQRYILDQILHHLKSHRVDCLLIAGDIYDKTIPSSEAT 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 + N F+ L + ++++++GNHDS + L N + + P +L D Sbjct: 61 EVLNHFLKCLNEQKINVILISGNHDSASRLAFGSSFFKQGNVFIQTHYSNQPIVL--EDE 118 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 + IP++ DI + G+E+ L +Q D K I Sbjct: 119 YGLIDVYAIPYMNRFDIKKAL----GLEETPSLKEGYHRLLEQLNLDLEKR-------NI 167 Query: 181 ATGHLTTVGASK--SDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG-MEHVRY 237 H +G S+ D+ ++ IG L+ + DY+ALGHIH+ + I +RY Sbjct: 168 LVAHQFVLGVSEPGEDSSEELLIGGLEEVSSPILEDFDYVALGHIHKPETILNLSGRIRY 227 Query: 238 CGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWR 297 GSP+ S E + K + + ++ +++ P+ ++K + + + Sbjct: 228 SGSPLAYSKAEANQLKSMPIFELKTKPDWELKLISLFPQHPVKMVKTTASDVLNGIRGL- 286 Query: 298 DVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLV-RRSREQRERVLASQQRET 356 E +L +E+T + I + + P + + + + Sbjct: 287 ----EMMDYLYLELTDAYF---PYAAISEIAKKYPNYLSIFPSHQNYLFQENDEFDHLQK 339 Query: 357 LSELSVEEVFNRRLALEELDESQQQRLQHLFT 388 L + + +++R++ L + Q +Q L+ Sbjct: 340 LKPMEIINSWHQRVSGRNLSDEQLGWIQELWN 371 >UniRef50_D0LY15 Nuclease SbcCD, D subunit n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LY15_HALO1 Length = 467 Score = 260 bits (664), Expect = 7e-68, Method: Composition-based stats. Identities = 127/451 (28%), Positives = 190/451 (42%), Gaps = 59/451 (13%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR+LHTSDWHLG + + SR+ EH+ FL WL++T + VDA+++ GD+FD+ +PP+ A+ Sbjct: 1 MRLLHTSDWHLGHSLHDVSRDYEHECFLRWLVDTLEAEAVDALLITGDIFDSANPPATAQ 60 Query: 61 TLYNRFVVNLQQ--TGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP------ 112 + +F+ + G ++V+ GNHDS A L + +++ L T V+ + P Sbjct: 61 ASWYQFLAEVHARLPGLDVLVIGGNHDSAARLEAPKPVLSALRTHVIGALRRGPRDQHGR 120 Query: 113 ---------QILPRRDGTPGAVLCPIPFLRPRDIIT------------------------ 139 L RDG A++ +PFLR D+ Sbjct: 121 RPLELERAIVPLRDRDGEVAAIVAAVPFLRTADLPRPRRASADATVASEVTDASDGPADS 180 Query: 140 --SQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPIIATGHLTTVGASKSD-AV 196 S A E ++ L DA + R ++ATGH VG S + Sbjct: 181 GASDADAGDEELRRDPLIGGVRQVYAEVLDAARARLQPGQALLATGHCYMVGTDISTLSE 240 Query: 197 RDIYIGTLDAFPAQNFP-PADYIALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYV 255 R I G A P FP Y ALGH+H+AQ +GG E VRY GSPIPL+ DE V Sbjct: 241 RRILGGNQHALPVSIFPDDVAYAALGHLHKAQRVGGREGVRYAGSPIPLALDEARYRHQV 300 Query: 256 HLVTFSNGKLESVENLNVPVTQPMAVLK----GDLASITAQLEQWR--------DVSQEP 303 LV L V +L+VP T + + + A +E + Sbjct: 301 LLVELEGPALAEVRSLSVPRTVDIVRIPKSGAASPKEVFAAIEALPAWTPGEGDPQKSDT 360 Query: 304 PVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQR-ETLSELSV 362 +L++ + D+ ++ +++ + + R LA L EL Sbjct: 361 RPFLELSVAIDKPRAQLKGEVEDKLRGKWPRLAKLGVVRRGDGAPLADALPTRELRELDP 420 Query: 363 EEVFNRRLALEELDESQQQRLQHLFTTTLHT 393 EEVF RR A + LQ F L Sbjct: 421 EEVFLRRYARDHAGAPDDDLLQS-FHRVLED 450 >UniRef50_C7GI85 Exonuclease SbcD (Fragment) n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GI85_9FIRM Length = 304 Score = 260 bits (664), Expect = 7e-68, Method: Composition-based stats. Identities = 74/298 (24%), Positives = 127/298 (42%), Gaps = 20/298 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ LH SD H+G+ S + + L + E A QVDA+++AGD++D P + A Sbjct: 1 MKFLHISDLHIGKRVNEFSMIEDQKYILRQIKEIALEKQVDAVMIAGDIYDKPVPSAEAV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 L+++F+ L G + ++GNHDS + +M+ V + + +D Sbjct: 61 QLFDQFLTGLADCGKKVFAVSGNHDSAERIAFGAQLMSSREVYVSPVYDGEVRCVTCQDA 120 Query: 121 TPGAVLCPIPFLRPRDIITS-------------QAGLNGIEKQQHLLAAITDYYQQHYAD 167 + +PF+RP + + AG Q+ + + Y Sbjct: 121 YGELCIWLLPFIRPAVVRHAWRKVTEGISIGKKDAGTKQDLAQEDDVETVETYQDALQFV 180 Query: 168 ACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQ 227 + D I H GAS+ ++ ++ +G LD A+ F DY+ALGHIH Q Sbjct: 181 VSHMPVDASKRNILVAHQFVTGASRCESE-EVSVGGLDQIGAEVFDVFDYVALGHIHSPQ 239 Query: 228 IIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGD 285 I E +RYCG+P+ SF E + K +E + + + + ++G Sbjct: 240 HI-ERETLRYCGTPLKYSFSEAEQKK-----EIKEKGDIFIEKVPLKPLRDLRKIRGT 291 >UniRef50_Q03P49 DNA repair exonuclease n=46 Tax=Lactobacillales RepID=Q03P49_LACBA Length = 377 Score = 260 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 90/398 (22%), Positives = 162/398 (40%), Gaps = 25/398 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR LHT+DWH+G+ + S E + + + + A+ QVDA+++AGD++D P A Sbjct: 1 MRFLHTADWHIGKKLHGYSLLDEQRDAYEQIKKIAEKEQVDAVVIAGDLYDRALPSEAAV 60 Query: 61 TLYNRFVVNL-QQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 N +V+L +Q ++ ++GNHDS L ++ A N + A + + D Sbjct: 61 GTLNAMLVDLNRQQHFPVLAISGNHDSATRLGYGQEWFASTNFFMRTRLAAALKPVTLAD 120 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 +P+ P + I + + Q ++A K Sbjct: 121 T----QFFLLPYFEPIQARQLFED-DQIRTVNQAMERLVKAMQANFAPDKKH-------- 167 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCG 239 + H G SD+ + +G L+A P + P DY+ALGH+HR + + + ++Y G Sbjct: 168 VLVAHFFAAGGRHSDSETLVQVGGLNAVPTELLAPFDYVALGHLHRKEALQQVPTMKYSG 227 Query: 240 SPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDV 299 SP+ S E +K V L+ + P+ + VL A + ++ R Sbjct: 228 SPLKFSTSEAEDTKGVWLIDTDTTPVTVTFKPLKPL-HDLIVLTDSFAHL---MDPERHY 283 Query: 300 SQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSE 359 S ++ I +T + ++ +Q L P + L R + V + Q+ Sbjct: 284 SVTRDDFIAIALTDTTPITNV---MQRLKTRFPKIIELNRTKQLTVTPVDLNIQQVQRDP 340 Query: 360 LSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGE 397 L++ F ++ L +Q + TL E Sbjct: 341 LALMTTFFEQMTQHPLTIAQ----EKWARETLQAAQKE 374 >UniRef50_C0EV38 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EV38_9FIRM Length = 399 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 100/406 (24%), Positives = 177/406 (43%), Gaps = 25/406 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+++HT+DWHLG+N SR E + FL + + Q D II+AGD++D +P + A Sbjct: 1 MKLIHTADWHLGKNIEGHSRLEEQRLFLKDFINICEEEQADIIIIAGDIYDNYNPSAMAE 60 Query: 61 TLYNRFVVNLQQTG-CHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQI----- 114 L+ + L + G C VV+AGNHD+ L S + + + Sbjct: 61 QLFYDTLKQLSRNGDCMTVVIAGNHDNPERLVASGPLARDHGIVMAGTPNSVITPGMYGK 120 Query: 115 --LPRRDG--------TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQH 164 + D A + +PF P + ++ L+ E++ A+ ++ Sbjct: 121 NEITESDAGYIHAIIHGEEADILLVPF--PSEKRLNEVYLDETEEETKKAASYSEKMSSL 178 Query: 165 YADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPP-ADYIALGHI 223 + + + +IA HL + + + + R I +G + FP ADYIALGH+ Sbjct: 179 FGSLATHFHEDSIHLIA-SHLFVMNSVEDGSERSIQLGGSYMVGGEIFPENADYIALGHV 237 Query: 224 HRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLK 283 H+ Q + G RY GSP+P + E K V VT + G ++ L +PV +P+ V Sbjct: 238 HKPQKVPGCPKARYSGSPLPFNVRETSFDKQVIAVTLTAGSPCTIRELPLPVYKPIEVWH 297 Query: 284 GDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSRE 343 +I +EQ + + + W+ +E+ TD Y+H+ K ++ + + V E Sbjct: 298 --CENIDDAVEQC-EANADRECWVYLEVKTDHYIHEEDIKKMKAIKADILSITPVLPEDE 354 Query: 344 QRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTT 389 + + + + EL + F R+ ++ E L + Sbjct: 355 SEDFSASDLKEQPFDELV--KNFYRKKFHVDIGEETFSLLMSIIEE 398 >UniRef50_D1NTD7 Putative nuclease SbcCD, D subunit n=1 Tax=Bifidobacterium gallicum DSM 20093 RepID=D1NTD7_9BIFI Length = 440 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 103/442 (23%), Positives = 170/442 (38%), Gaps = 44/442 (9%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR+LHTSDWH+G+ F LDWL++T + VD + V+GD++D P + A Sbjct: 1 MRMLHTSDWHIGRRFKGMDLLDYQTRVLDWLIDTIECEHVDVLCVSGDIYDLPRPGADAV 60 Query: 61 TLYNRFVVNLQQTGC-----HLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQIL 115 ++++ L H+V+ GNHDS A L ++ N + + + + Sbjct: 61 RVFDQAYERLGALQVNGHALHVVMTPGNHDSAARLGVGSRLLRE-NVHMRCDLAYIGEPV 119 Query: 116 PRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRG-D 174 G ++ +P+L P A L G + A + + +AD + R D Sbjct: 120 DIAVGGQRLLIYALPYLNPDASRGMLAKLAGHDVACSHAAVMQAALELVHADLERRREQD 179 Query: 175 QPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNF--PPADYIALGHIHRAQIIG-- 230 +P + H GA +SD+ R I +G +D+ PA F DY+ALGH+HR Q + Sbjct: 180 HDVPAVLMAHTFVSGAEQSDSERGIAVGGIDSVPASMFSTSGLDYLALGHLHRPQRVTIP 239 Query: 231 ------GMEHVRYCGSPIPLSFDEC------GKSKYVHLVTFSNGKLESVENLNV----- 273 RY GS + SF E G K V +V F + N +V Sbjct: 240 VTGDAMHTPIARYSGSLLAYSFSERTVPPRLGNGKQVVIVDFEHATGNVPHNTDVLEDAE 299 Query: 274 -----PVTQPMAVLKG--------DLASITAQLEQWRDV--SQEPPVWLDIEITTDEYLH 318 PV + ++ L ++ ++ DV W+ ++I D + Sbjct: 300 DRNEPPVAARVRRVRTLDVQSDEPALVQVSGTPDELIDVLAPLHHDDWVSMQIMLDGPMP 359 Query: 319 DIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDES 378 + + + +E R + ELSV F + + Sbjct: 360 RGLYQRLSAAYAYALEKRTQYVGAMARRPRTMADLSTAPDELSVLSGFVQYSYGRPPEPE 419 Query: 379 QQQRLQHLFTTTLHTLAGEHEA 400 + L+ T H EH + Sbjct: 420 ELAVLKEAVTRV-HAARDEHAS 440 >UniRef50_Q73RC0 Nuclease SbcCD, D subunit, putative n=1 Tax=Treponema denticola RepID=Q73RC0_TREDE Length = 383 Score = 259 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 88/400 (22%), Positives = 163/400 (40%), Gaps = 35/400 (8%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHT+D HLG++ Y + + LD + + A+I+AGD++D PP+ Sbjct: 1 MKILHTADLHLGKSLYESPQIERQKKMLDDIHKILLKDDYAALIIAGDIYDRSIPPAEYV 60 Query: 61 TLYNRFVVNLQQ--TGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRR 118 L++ F+ + + + ++ GNHDS L+ I++ N + A G + Sbjct: 61 ALFDSFLSAVHKDCPNTAVFIIPGNHDSAERLSFGSKILSSSNIHIAAGIGKLCSPIIIA 120 Query: 119 DGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLP 178 +PFL E+ L Q + K D +P Sbjct: 121 QNGEKVQFFLMPFLHLGSF---------SEENSELKLTSQSEMAQEASRRLKEAVDPSMP 171 Query: 179 IIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYC 238 + H+ T+ S + R ++GT + F Y ALGH+H+ Q + + + Y Sbjct: 172 SVLAAHIFTLNGESSSSER-AFLGTAEYVSPALFDFFTYTALGHLHKMQKV--TDRMYYS 228 Query: 239 GSPIPLSFDECGKSKYVHLVTFS---NGKLESVENLNVPVTQPMAVLKGDLASI--TAQL 293 G+P+ +FDEC K V V G VE + + + M+ L+G T + Sbjct: 229 GAPLTYAFDECSTEKVVLSVDVDCKTQGFPVRVEKIPISPLRKMSRLEGSFFEFFNTDKF 288 Query: 294 EQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQ 353 + ++D +L+I +T + +Q L+ +E L ++ Sbjct: 289 DAYKD------DFLEINLTGSAVIQSPMSLLQQKFPY------LLNLHQEAVAAELKDEE 336 Query: 354 RETLSELSVEE---VFNRRLALEE-LDESQQQRLQHLFTT 389 + + + ++E+ +F + E+ +DE + Q LF + Sbjct: 337 QIHILKKNIEDEDVIFENFMLFEKTIDEEPSAKKQELFKS 376 >UniRef50_Q1NCL0 Nuclease SbcCD, D subunit n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NCL0_9SPHN Length = 410 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 109/413 (26%), Positives = 176/413 (42%), Gaps = 42/413 (10%) Query: 2 RILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYART 61 R++H+SDWH+G +S REAEH+AFL WLL+ + D ++V GD++D +PP A Sbjct: 9 RLIHSSDWHIGHELFSHEREAEHEAFLSWLLDRLVAEEADLLLVTGDIYDVANPPVSAMA 68 Query: 62 LYNRFVVNLQQ--TGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA-------- 111 F+ + +V++ GNHDS A +N ++ ++ S Sbjct: 69 RLYAFLRDATTRCPNLQIVIIGGNHDSAARINLPAALLGPGRIHLIGSLPRVNGIPDFER 128 Query: 112 -PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACK 170 L R GT A L +P+ RP D+ + + + Y+ + Sbjct: 129 MLVPLKDRAGTIVAWLAAVPYCRPGDMGS---------------GGLPELYENVLTAGAE 173 Query: 171 LRGDQPLPIIATGHLTTVGASKSD-AVRDIYIGTLDAFPAQNFPP-ADYIALGHIHRAQI 228 LP+I TGHL S+ + R I +G +A F A YIALGH+HR Q Sbjct: 174 RA--NGLPLIVTGHLHVAEGDVSEHSERRITVGGEEAQATSLFDDRAAYIALGHLHRPQT 231 Query: 229 IGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLK----- 283 I G +RY GSP PLS E + +V G + E +P P + Sbjct: 232 IKGDTLIRYAGSPFPLSATERLYRHSISIVDLLGGGAAAREE-EIPRVVPFLTVPAEGPK 290 Query: 284 --GDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRS 341 G++ +L+ ++ + ++++ + D ++Q ++ A + P+ + + R Sbjct: 291 PIGEVELAIQELDFDPELPRGLHPFVEVSVLVDGPEPNLQARVMAALDGKPLRLTRIARV 350 Query: 342 REQRERVLASQQRE-TLSELSVEEVF---NRRLALEELDESQQQRLQHLFTTT 390 + + +RE L+EL E VF R E E Q Q L T Sbjct: 351 SAREATNQSIAEREVDLAELLPEAVFAELFERAHGSEPPEDLSQAFQALLIET 403 >UniRef50_Q07GQ3 Exonuclease SbcD, putative n=1 Tax=Roseobacter denitrificans OCh 114 RepID=Q07GQ3_ROSDO Length = 381 Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 84/390 (21%), Positives = 163/390 (41%), Gaps = 21/390 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR+LHT+DWHLG+ S + LD + + V+ +++AGDV+D SP A Sbjct: 1 MRVLHTADWHLGKTLRGVSLHEDQAHVLDQVFKAVVEEGVEVLLIAGDVYDKASPSEAAM 60 Query: 61 TLYNRFVVNLQQ-TGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 LY+ F+ + + T +VV+AGNHDS L + + V L D Sbjct: 61 KLYSDFLERVHEQTDAAIVVIAGNHDSGQRLGTASKLFDRRRILVRGPIERDETPLILED 120 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 + +P+ + + + L A I +A + R Sbjct: 121 EHGKIAISALPYGEIYSARRAFEAEDIRSPEDVLRAQI---------EAARARVPDDARW 171 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCG 239 + H ++ R + +GT++ A F A+Y+ALGH+HR Q GG +RY G Sbjct: 172 VVVAHAFVTNCQPTETERRLSVGTVETVSAAIFEGANYVALGHLHRPQTAGG-NAIRYSG 230 Query: 240 SPIPLSFDECGKSKYVHLVTFSN-GKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRD 298 SP+ FDE G +K + + G++ +++ ++ + + ++G L + ++ + Sbjct: 231 SPLAFGFDEAGTTKSMTVFDLDGQGQVVNLKTVDFEPLRQVREVRGLLEDLVSEAK---- 286 Query: 299 VSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLS 358 + ++ + D L + +++ P + +R ++ A + + L Sbjct: 287 -ANPSDDYIRAILLDDGALIEPAAQLR---PHYPNILQTLREKKQDLVMSSAGRAQSKLD 342 Query: 359 E-LSVEEVFNRRLALEELDESQQQRLQHLF 387 + + V F + E E ++ ++ + Sbjct: 343 DPVGVIGEFLTYVRGEGATEREEGVVKGVL 372 >UniRef50_D2LF15 Nuclease SbcCD, D subunit n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LF15_RHOVA Length = 390 Score = 258 bits (658), Expect = 4e-67, Method: Composition-based stats. Identities = 88/390 (22%), Positives = 158/390 (40%), Gaps = 18/390 (4%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR+LHT+DWHLG+ F ++ + +H L+ + Q A+I+AGD+FD +P A Sbjct: 1 MRLLHTADWHLGRQFDGRALDDDHAHVLEQVYAVIVAEQPQALIIAGDLFDRAAPSEAAV 60 Query: 61 TLYNRFVVNL-QQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L+N FV + + T ++V+AGNHDS + + + V L D Sbjct: 61 RLFNDFVQRVVRDTETAIIVIAGNHDSADRIGAMGLLASRNRALVRGPLTAIEVPLILED 120 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 + +PF +AA D + A A + + Sbjct: 121 EFGPVAISGLPFAYEYAARECF--------HDTAIAAPVDVLRAQVAAAKEHVPAGARWV 172 Query: 180 IATGHLTTVGASKSDAVRDIY--IGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRY 237 IA H GA ++ R + +G ++ F A Y+ALGH+HR Q + G EH+ Y Sbjct: 173 IA-AHAFVSGAVVGESERSLSRAVGGIETVTVDVFEGAHYVALGHLHREQTVAGAEHICY 231 Query: 238 CGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWR 297 GS +P +F E K + LV + + + + + ++G + +I + E Sbjct: 232 SGSLLPFAFGEDDHDKGMLLVDLAEHGGIAKRFIPFQLKRRARTIRGTMEAILS--EGAL 289 Query: 298 DVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETL 357 + SQ+ +L I +T D D ++I+ + + + + ++ + Sbjct: 290 NPSQD---FLRIVLTDDARAIDPMKRIREFYPN-ACLLEYEKDIALEAHHPGVARATKLT 345 Query: 358 SELSVEEVFNRRLALEELDESQQQRLQHLF 387 V F + +++Q + Sbjct: 346 DPAEVIAEFLQFTRNSPPTDAEQALIAQAL 375 >UniRef50_B7GYJ5 Exonuclease sbcD-like protein n=18 Tax=Acinetobacter RepID=B7GYJ5_ACIB3 Length = 422 Score = 257 bits (657), Expect = 4e-67, Method: Composition-based stats. Identities = 105/415 (25%), Positives = 172/415 (41%), Gaps = 32/415 (7%) Query: 3 ILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYARTL 62 LHTSDWHLGQ FY+ SR EHQ FL WLL Q Q A+++AGD+FD +P S A+ Sbjct: 9 FLHTSDWHLGQFFYNHSRHYEHQQFLSWLLTQIQEKQPHALLIAGDIFDVINPGSQAQKQ 68 Query: 63 YNRFVVNLQQTGCHL--VVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ------- 113 +F+ + + H+ +++AGNHDS + + ++ N V Sbjct: 69 LYQFLADAHRIAPHMQTLMIAGNHDSGYRIEQVEPLLEKYNAKTVGVVRWNEDKTLDLDR 128 Query: 114 ---ILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACK 170 + ++ A +PFLR A + G + Y Q K Sbjct: 129 LLLPIYNQNQDIVAWCLALPFLR-------SAEITGFNEHTTNSKNAIAYLHQQLIAEAK 181 Query: 171 LRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPA-DYIALGHIHRAQII 229 R +I H G SD+ R I IG +A F A DY+ALGH+H+ Q + Sbjct: 182 RRKTPDQALILMSHAHMQGGETSDSERPIIIGNEEALSTTLFEDAVDYVALGHLHKPQKV 241 Query: 230 GGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLE----SVENLNVPVTQPMAVLKGD 285 G H+RY GSPIPLSF E V V + E + +P + ++G+ Sbjct: 242 -GQPHIRYSGSPIPLSFSEINYKHQVVEVKIDPAQDTDSRLQFEAVEIPRCIQLHRIRGE 300 Query: 286 LASITAQLEQWRD---VSQEPPVWLDIE-ITTDEYLHDIQRKIQALTESLPVEVLLVRRS 341 L + QL+ + + ++DIE + +++++ +A ++ + R Sbjct: 301 LNEVLQQLKALPHGVIENIDHREYVDIEYYSLTPPQPNLRQQFEAALPPDRYRLVRISRQ 360 Query: 342 REQRERVLA-SQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLA 395 ++ + + Q L + E++F + + F + + Sbjct: 361 YVNKDATNSNTTQHIALEPPTPEKLFQNIWEKQGYSAD--DAVLKDFLSLVQEAQ 413 >UniRef50_UPI0001AF0806 nuclease SbcCD, D subunit n=1 Tax=Streptomyces ghanaensis ATCC 14672 RepID=UPI0001AF0806 Length = 390 Score = 257 bits (656), Expect = 5e-67, Method: Composition-based stats. Identities = 91/389 (23%), Positives = 164/389 (42%), Gaps = 18/389 (4%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ LHTSDWH+G+ +R E + L ++ A+ H+VDA++VAGD++++ +P + A+ Sbjct: 1 MKFLHTSDWHVGKVLKGHNRLDEQRTVLREIVRVARDHRVDAVLVAGDLYESSAPSAQAQ 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVAS----AGHAPQILP 116 L + ++ L++TG ++ +AGNHD AT + R +MA T+ + A Sbjct: 61 QLLVQTLLALRRTGAEVIAIAGNHDHAATFDAYRPLMASAGITLAGTARPAADGGVVEFT 120 Query: 117 RRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQP 176 R + +PFL R + + + E + + A D Sbjct: 121 ARSTGEPVAVALLPFLARRHAVRAAQLVT--ETPREAATGYGRLVRDLLAALTAGFRDDT 178 Query: 177 LPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPP-ADYIALGHIHRAQIIGGMEHV 235 + ++ HLT G R P FPP A Y+ALGH+HR Q + V Sbjct: 179 VNLV-MAHLTAAGGKLGGGERSAQSVLEYWVPTSAFPPDAHYVALGHLHRRQSLPAPCPV 237 Query: 236 RYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVE-NLNVPVTQPMAVLKGDLASITAQLE 294 YCGSPI L F E S V +V G V + + + + ++G + +T + E Sbjct: 238 HYCGSPITLDFGEENDSTVVLVVEAEVGTPTRVTAEVPIGSGRRLRTVRGTVDEVTRRAE 297 Query: 295 QWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQR 354 ++ D +L + + +++ +Q L + + + Sbjct: 298 EFGD------DYLRVLLCEPAR-AGLRQDVQRLLPN--ALEVRIDPGFAAPVHTTGPSPP 348 Query: 355 ETLSELSVEEVFNRRLALEELDESQQQRL 383 ++ S E+F+ + + + + L Sbjct: 349 ADGADRSPAELFHAYCIARGIADERVEAL 377 >UniRef50_C3RMV8 Exonuclease sbcD n=3 Tax=Bacteria RepID=C3RMV8_9MOLU Length = 377 Score = 257 bits (656), Expect = 6e-67, Method: Composition-based stats. Identities = 81/390 (20%), Positives = 157/390 (40%), Gaps = 26/390 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR +H SD HLG+ Y ++ L+ + + +++D +++AGD++D P + A Sbjct: 1 MRFVHISDIHLGKLLYQQNLLEIQADLLNQVCDYLVDNEIDVLVMAGDIYDRSVPSNEAI 60 Query: 61 TLYNRFVVN-LQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 + N F+ + + ++++AGNHDS + L+ ++ + A + + Sbjct: 61 DVLNDFLTKVILKYHKKVLMIAGNHDSASRLSFVSGLLRQEGLYIEAYPAKQMKPIEIE- 119 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 G +PF +P I + Q + + D P Sbjct: 120 ---GVNFYLMPFFKPSYIRYLYEDEQIVTYQDAFRCYLEHQ-----------KIDFTKPN 165 Query: 180 IATGHLTTVGASK---SDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVR 236 + H G S+ S++ + +G + DY+ALGHIH Q I E +R Sbjct: 166 VLITHQFIAGNSEVMRSESEAVLSVGGTEIIDVSLVKQFDYVALGHIHAPQKIS-TETIR 224 Query: 237 YCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQW 296 Y GS + SFDE ++K + VT N K+ S + +++ Q + + G I A Sbjct: 225 YSGSLMRYSFDEVNQTKSIVEVTIDNKKV-SYQLVSLQPKQDLIKITGSFDEIMAD---- 279 Query: 297 RDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRET 356 + ++ +E+T + + ++ ++ S E A E Sbjct: 280 -SFAVNNNDFIAVELTDSMLVPNAIDYLRTKFSNVLQITYPKLISNETSNNTKADPGFEK 338 Query: 357 LSELSVEEVFNRRLALEELDESQQQRLQHL 386 L +++ E F +++ EL +Q + + Sbjct: 339 LDSVALFEQFYQKIKGTELSAEAKQIVTEI 368 >UniRef50_C9RQA4 Nuclease SbcCD, D subunit n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RQA4_FIBSS Length = 438 Score = 256 bits (654), Expect = 9e-67, Method: Composition-based stats. Identities = 119/422 (28%), Positives = 192/422 (45%), Gaps = 37/422 (8%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ +HT+DWHLG + R E AFL WL + A+I+AGD+FD +P + A+ Sbjct: 1 MKFIHTADWHLGNMMHDIDRTEEAAAFLKWLKGEIERVGAQALIIAGDIFDIVNPSNVAK 60 Query: 61 TLYNRFVVNLQQTGCH-LVVLAGNHDSVATLNESRDIMAFLNTTVVASAGH---APQILP 116 T Y +F+ +L +T C +VV+ GNHDS A L+ ++ LN VV S ++ Sbjct: 61 TQYYKFLASLLKTNCTNVVVVGGNHDSGALLDAPAGVLEALNIKVVGSINGRKVEDLVVE 120 Query: 117 RRDGTPGA--VLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYAD----ACK 170 +DG + C +PF+R ++ + + D ++ Y D A + Sbjct: 121 LKDGDENVIGICCAVPFMRNLELEQFYKTDERESGEGADDVSDEDLLKRLYGDVYRYAVE 180 Query: 171 LRGDQPLPIIATGHLTT------------VGASK---------SDAVRDIYIGTLDAFPA 209 LRG++ +PIIATGHL GA++ D VR++ IGTL Sbjct: 181 LRGERNIPIIATGHLYASNLSGRNSDELGSGANENATISENSVEDGVREV-IGTLGNVDV 239 Query: 210 QNFP-PADYIALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESV 268 FP DY+ALGHIH A ++ VRY GSP + FDE + V V ++ V Sbjct: 240 STFPSELDYVALGHIHYASMVAKNPKVRYSGSPFAMGFDESNCKRVVLTVDVKPNEVPVV 299 Query: 269 ENLNVPVTQPMAVLKGDLASITAQLEQWRD--VSQEPPVWLDIEITTDEYLHDIQRKIQA 326 E VP KGDL ++ L V+ ++D+ +TT +++ + + ++A Sbjct: 300 EKEEVPKAMRFEQFKGDLETLKRCLRNLEKELVANPMETYVDLLLTTGDFVS-LNQALEA 358 Query: 327 LTESLPVEVLLVRRSREQRERVLASQQR-ETLSELSVEEVFNRRLALEELDESQQQRLQH 385 V R SR E+ + + E+ F +A ++ + +++ Sbjct: 359 EEAGKHFVVKRHRISRGVLRGANRFDDNVESTKQYTQEDYFRMLIATNAEEKEDSEVVKN 418 Query: 386 LF 387 L+ Sbjct: 419 LY 420 >UniRef50_B3JFY8 Putative uncharacterized protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JFY8_9BACE Length = 418 Score = 255 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 98/413 (23%), Positives = 170/413 (41%), Gaps = 38/413 (9%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 ++IL TSDWHLG F+ R+ EH FL WLL DA++V+GD+FD+ +P + ++ Sbjct: 2 IKILATSDWHLGNTFHGFDRQEEHADFLRWLLGAVGQKNPDALLVSGDIFDSSNPSAASQ 61 Query: 61 TLYNRFVVNLQQ--TGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRR 118 LY F+ L Q +++AGNHDS A L R ++ V + Sbjct: 62 ELYYSFLDTLTQRFPQLQTIIIAGNHDSAARLEAPRLMLERHRVYVRGLIRGQEEGNFLP 121 Query: 119 DG-----------TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYAD 167 D A + +P+LR D + G + ++ ++ Sbjct: 122 DDLLLPVCSAAHPEERAWVLAVPYLRDGDFTRGMSYGEG----------VGEFLRRAVEA 171 Query: 168 ACKLRGDQPLPIIATGHLTTVGASKSD-AVRDIYIGTLDAFPAQNFPPADYIA-LGHIHR 225 A R +I HL G+ ++ + I IG + + +A LGH+HR Sbjct: 172 ANLRRDRSREALILMAHLYATGSEVAENSSERIVIGGSEMVSLDEIDESVTLALLGHLHR 231 Query: 226 AQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESV-ENLNVPVTQPMAVLKG 284 Q + G E+ Y GS +P+SF E G +G+L V E L+ P+ P+ + Sbjct: 232 NQKVSGRENWLYPGSALPMSFAEKGYCHGAVYYEIEDGRLNGVSEFLDYPLQHPLVSVPA 291 Query: 285 DLASITAQLEQWRDVS-------QEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLL 337 + L+ R + +EP +L++ + D + I ++++ + +S V + Sbjct: 292 KPLPLAEVLDLLRALPDKDKMSEEEPVPYLEVNVLLDAPVAGINKQVEDVLQSKNVRLCR 351 Query: 338 V----RRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHL 386 R + + + + + L L EV R+ + + L L Sbjct: 352 TVIAYRVQQSAGDGEVVLESVDDLLTLDPIEV-IRKSYQNKFRCEMRDELVEL 403 >UniRef50_C9L5R8 DNA repair exonuclease n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L5R8_RUMHA Length = 413 Score = 255 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 105/419 (25%), Positives = 181/419 (43%), Gaps = 31/419 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHT+DWH+G+ KSR E + L+ + A + D I +AGDVFD G P + A Sbjct: 1 MKILHTADWHIGKLLEGKSRLEEQRIVLEQFVSIADETEADVICIAGDVFDNGHPSAGAE 60 Query: 61 TLYNRFVVNLQQTGCH-LVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP------- 112 L + L + G +V++AGNHD + L + + + Sbjct: 61 MLLYHTLKELSRQGQRLVVLIAGNHDQPSRLEAIVPLAREHGIIIYGTPKTKIPSGKYGN 120 Query: 113 -QILPRRDG-------TPGAVLCPIPFLRPRDI--ITSQAGLNGIEKQQHLLAAITDYYQ 162 +I +G AV +P++ + + + + + ++ A I + +Q Sbjct: 121 FEIESLEEGVFSFSHKGEKAVFVCVPYVSEKTLNEVLYREEDSDEKRAADYAAKIGELFQ 180 Query: 163 QHYADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPP-ADYIALG 221 + + R + I H+ T+G K + + I +G P + FPP A Y+ALG Sbjct: 181 KKAS-----RYEYNTINILMSHVFTLGCKKDGSEQGIMLGNSYLLPPEVFPPKAQYVALG 235 Query: 222 HIHRAQI-IGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMA 280 H+HR Q +G +RY GSP+P E +K LVT K VE+ +P+ Sbjct: 236 HVHRPQKVVGSHGRIRYSGSPLPYRLQETVIAKQCSLVTLHPQKEAVVEDFYFDNPKPIE 295 Query: 281 VLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRR 340 K S L++ + +Q P ++ ++I TD Y+ + Q K + +EV+ V Sbjct: 296 --KWICKSYDEALKKCEE-NQNRPCYVYLQIYTDTYIREEQLKELKSRKEDILEVIPVFP 352 Query: 341 SREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHE 399 E ++ ++ L EL ++ + ++ +E + LQ + A HE Sbjct: 353 ETETPKKGTVFTEKSFL-ELFLD--YYQKKKGVLPEEEIVETLQEILIKEDENEADFHE 408 >UniRef50_UPI00019735BC nuclease SbcCD, D subunit n=1 Tax=Clostridium sp. M62/1 RepID=UPI00019735BC Length = 395 Score = 254 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 82/403 (20%), Positives = 158/403 (39%), Gaps = 20/403 (4%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ H SD H+G+ S +A L ++ A+ ++ DA+++ GD++D P A Sbjct: 1 MKFFHLSDLHIGKQLNGWSLRENQEAVLGQIVRYAEEYRPDAVLICGDIYDKSVPSGEAY 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVV----ASAGHAPQILP 116 +++ F+ L G ++V+AGNHDS L+ + I+ + + G + + Sbjct: 61 SIFGGFLERLAGIGIPVLVIAGNHDSPERLSFAGQILEKERIFISSFPPSEKGERLRRVT 120 Query: 117 RRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQP 176 D PF+RP + A +G +Q+ + Y Q + D Sbjct: 121 LSDRWGEVDFYLFPFMRPGYVRRLLAAESG--EQEDISVQSLTYDQAFRLMLEREEIDSS 178 Query: 177 LPIIATGHLTTVGASK----SDAVRDIYI-GTLDAFPAQNFPPADYIALGHIHRAQIIGG 231 + H V AS+ ++ + + G LD DY ALGH+H +Q + G Sbjct: 179 RRNVILCHQFFVSASEKPDTCESETAVLMAGGLDQIDISALDCFDYAALGHLHGSQRV-G 237 Query: 232 MEHVRYCGSPIPLSFDECGKSKYVHLVTFS-NGKLESVENLNVPVTQPMAVLKGDLASIT 290 E RYCG+P S E K V +V G+ + L + Q + +G L + Sbjct: 238 RESARYCGTPYKYSVSEERHRKAVVMVELGRKGEEPLLSFLPLAGVQDVRKERGTLKQVL 297 Query: 291 AQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLA 350 + R ++ I +T + + + +++ + + + + R +R Sbjct: 298 S-----RAFEPSCHDFVSIVLTDEREPANFREQLREKYD--HILEIRIDNERTRRRLEDE 350 Query: 351 SQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHT 393 + L + F + +L E +++ + + Sbjct: 351 KEPIPVLKPMEAFRQFFSMILNSDLTEEEERLMAQVIEEAKEE 393 >UniRef50_B9EBU8 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9EBU8_MACCJ Length = 372 Score = 253 bits (646), Expect = 9e-66, Method: Composition-based stats. Identities = 76/390 (19%), Positives = 158/390 (40%), Gaps = 27/390 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+I+H D H+G+ ++ E L+ L++ +D +++AGD++D P A Sbjct: 1 MKIMHLGDLHIGKTINQQNLLEEQSILLNRLIQDIVDASIDVLVIAGDIYDRSIPSREAM 60 Query: 61 TLYNRFVVNLQQ-TGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 ++ F+ + Q +++++GNHDS L + + + A + Sbjct: 61 KVFETFIYEVNQVQKIPVLLISGNHDSAERLGYGKAWYKGHGMHIGTTIDDALNPVSID- 119 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 G +P++ P + + I I + +QH ++ Sbjct: 120 ---GVDFYLVPYIEPV-VARHYFEDDSIRTHHDTYKRIFEQIEQHL--------NKDRTN 167 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCG 239 I HL G +++ R+I +GT++ F DY+ LGH+H I E V Y G Sbjct: 168 ILVSHLFVAGGKTTESEREIIVGTIENVSLNLFDAFDYVMLGHLHTPDAIRD-EKVFYSG 226 Query: 240 SPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDV 299 S + SFDE + K + K + V + + + + G + Sbjct: 227 SIMKYSFDEVHQRKGYRIFDL---KKQQVSFITLSPPRDLEYATGTFEDAIK-----LKL 278 Query: 300 SQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSE 359 + + +L +E++ E+++D K++ + +L ++ R+ ++ + LS Sbjct: 279 AVDRNSYLKLELSDMEHINDPMFKLKQVYP----YLLELKPMINNRDIQYKQREVQQLSH 334 Query: 360 LSVEEVFNRRLALEELDESQQQRLQHLFTT 389 L + + F + ++DE+Q ++ L Sbjct: 335 LELVKQFYLDMTDSKMDETQTLLIEQLINE 364 >UniRef50_O67727 ATP-dependent dsDNA exonuclease n=2 Tax=Aquificaceae RepID=O67727_AQUAE Length = 379 Score = 252 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 89/392 (22%), Positives = 171/392 (43%), Gaps = 18/392 (4%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR++H SD H G+N SR + L+ +++ + ++ D ++VAGDVFD +P + A+ Sbjct: 1 MRLIHLSDIHAGKNLGRVSRNEDVVYALNQVVDFCKENKPDLVLVAGDVFDKANPDNEAK 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 + F + L VV++GNHDS + + ++ ++ VV +L + Sbjct: 61 EIIFDFFLKLHSLNIPSVVISGNHDSYEFMKSLKKLLQVIDVYVVPKPNLEECVLDVK-- 118 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 G + +P+ P + + ++AG + L+ Y + DA + Sbjct: 119 --GLKIACLPY--PSERVLTRAGEDSKLSYAVLVEKAIKYLYEKVKDAPLK--------V 166 Query: 181 ATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFP-PADYIALGHIHRAQIIGGME-HVRYC 238 HL G+ + R+ I A P DY+ALGH+HR Q I HV Y Sbjct: 167 LLSHLFIAGSKYTRTEREATITDYYAVEPSAIPEGFDYVALGHVHRYQRIEKAPTHVYYT 226 Query: 239 GSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRD 298 GS L F E G+ K+ + V G+ VE + + + P+ + + + +LE+ +D Sbjct: 227 GSLFQLDFSEAGQEKFFNFVELKEGEPPHVEAIKLSLKNPLHTFEINQENYAKELEKIKD 286 Query: 299 VSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLS 358 V V L ++ T +H + K++ +++ L+ ++R+ ++ + L+ Sbjct: 287 VQGYIKVHLIVKDKTK--MHLVAEKVKEALGEKLIKLELLTPEEAIKKRLEEEREIQKLN 344 Query: 359 ELSVEEVFNRRLALEELDESQQQRLQHLFTTT 390 L + + + E+ + + + L Sbjct: 345 LLDLYRDYFKESYGREVPQEIIKTVSQLLEQV 376 >UniRef50_A4X568 Exodeoxyribonuclease I subunit D n=3 Tax=Micromonosporaceae RepID=A4X568_SALTO Length = 382 Score = 250 bits (639), Expect = 5e-65, Method: Composition-based stats. Identities = 104/400 (26%), Positives = 166/400 (41%), Gaps = 22/400 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWH+G+ +SR EH+A L ++E A+ D II+AGD++DT +P A Sbjct: 1 MKILHTSDWHVGKVLKGRSRAEEHKAVLAGVIEVARREAPDLIIIAGDLYDTAAPTPEAT 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP---QILPR 117 L R + L++TG +V + GNHD+ A L+ R T+ S P I Sbjct: 61 RLVTRALTALRRTGADVVAIGGNHDNGAALDALRPWAEAAGITLRGSVREDPNEHVIDGT 120 Query: 118 RDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPL 177 +G L +PFL R + + + + D+ + A + + Sbjct: 121 TNGGEQWRLAALPFLSQRYAVRAVEMYELTAAEAN--QTYADHLGRIVARLTESFAEPDR 178 Query: 178 PIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPP-ADYIALGHIHRAQIIGGMEHVR 236 + T HLT VGA+ RD + A PA FP A Y+ALGH+HRAQ + G +R Sbjct: 179 VHLVTAHLTVVGATTGGGERDAHTVLGYAVPATVFPGTAHYVALGHLHRAQRVDGGCPIR 238 Query: 237 YCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQW 296 Y GSP+ + F E V +V + V + +P + ++G LA + Sbjct: 239 YSGSPLAVDFGEQENVPSVTVVEVTATTAAQVREVPIPAAASLRTVRGTLAQLAEV---- 294 Query: 297 RDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRET 356 + P WL + + + + L +L + + +A + Sbjct: 295 ----EVPDAWLRVFVREQPRAGLREEVQELLPRALEIRIDPELVPAPGSGTRVAQRAGR- 349 Query: 357 LSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAG 396 S E+F L + ++ LF + Sbjct: 350 ----SPRELFGDYLDDRGHADDD---VRGLFDELFEEVEH 382 >UniRef50_C6VTU7 Nuclease SbcCD, D subunit n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VTU7_DYAFD Length = 406 Score = 250 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 98/412 (23%), Positives = 165/412 (40%), Gaps = 32/412 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHT+DWH+G+ + SR E + LD + E A+ VDAI++AGD+FD +P S A Sbjct: 1 MKILHTADWHIGKKLDNFSRLEEQRLVLDEICEIAEHEAVDAIVIAGDLFDNFNPSSEAT 60 Query: 61 TLYNRFVVNLQQTGCH-LVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ------ 113 L + L G ++ +AGNHDS + + V + Sbjct: 61 ELLYSTLHRLSANGTRAVIAIAGNHDSPERIQVPDALAKVCGILFVGFPNTEIRPFCTQG 120 Query: 114 ---ILPRRDGTPGAVL--CPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADA 168 I+ G L P ++ L + A+ + QQH+ Sbjct: 121 QVDIIKTAPGFLEIKLPNAAFPLRVLHTPYANEQRLKTFLGVEESEEALRIHLQQHWQQL 180 Query: 169 CKLRGDQPLPIIATGHLTTV-----GASKSDAVRDI-YIGTLDAFPAQNFP-PADYIALG 221 D + HL + + D R I +IG A +NFP YIALG Sbjct: 181 ADEHLDNNGFNLLATHLFVMQKGGEMPEEPDDERPILHIGGAQAIYTENFPKQVHYIALG 240 Query: 222 HIHRAQIIGGME-HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMA 280 H+HR + + Y SP+ SF E ++KYV L+ GKL + + + + Sbjct: 241 HLHRFHQVDKVPAPAVYSSSPLAYSFSEANQNKYVILIEAEAGKLVGYTPIELLKGKKLR 300 Query: 281 VLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLH-DIQRKIQALTESLPVEVLLVR 339 + SI +E + S++ +++ I +D YL ++++ + + ++ Sbjct: 301 --RKSFHSIDEAIEWLGEHSED---LIELTIISDNYLEASDKKRLMEAHSGIIQIIPQIK 355 Query: 340 RSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTL 391 +S +A E LS+E++F + + L +F L Sbjct: 356 KS------EVADTSSEVDLSLSMEKLFQEYFKSKNKGQEPSNGLMEVFREVL 401 >UniRef50_C7MLN3 Exonuclease SbcD n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7MLN3_CRYCD Length = 409 Score = 250 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 99/420 (23%), Positives = 158/420 (37%), Gaps = 39/420 (9%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ +H +D H+G+ S E + L+ + A +V A+I+AGDVFD P A Sbjct: 1 MKFIHIADLHIGKRVRGFSLIDEQKYTLEQVASYAVQEKVHAVIIAGDVFDKPVAPLEAL 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 + F L +V +AGNHDS L+ + + PQ L + Sbjct: 61 DVLEEFFATLATAHIPVVAIAGNHDSAERLSFGARFREEQFVHIARAFSATPQFLDFTEA 120 Query: 121 T-------------PGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYAD 167 + IPF+RP + + H AI +Y Sbjct: 121 NNDSKEENKEKVAPLRVRVHLIPFVRPVHVRAAFP---------HQAEAIANYTDALRVA 171 Query: 168 ACKLRGDQPLPIIATGHLTTVGASKS----DAVRDIYIGTLDAFPAQNFPPADYIALGHI 223 + + H V ++ + +G LD+ A F DY+ALGHI Sbjct: 172 CANQPLIEKDANLLVAHQFVVHGESEPETCESE-TVSVGGLDSVQASVFDAFDYVALGHI 230 Query: 224 HRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSN-------GKLESVENLNVPVT 276 H AQ + G + +RY GS P SF E G+ K V L+ S + + L+V Sbjct: 231 HTAQSV-GRDTIRYSGSIFPYSFSEAGREKSVTLIDISPSITGANTSPGATNKRLSVTTR 289 Query: 277 QPMAVLKGDLASITAQLEQW-RDVSQEPPVWLDIEIT-TDEYLHDIQRKIQALTES-LPV 333 L IT E+ R +P + +T TD+ L + KI+AL + + Sbjct: 290 SLPLHENRTLREITGSFEELARTAPSDPHADDYLHVTLTDDALMNAMEKIRALYPHVMQL 349 Query: 334 EVLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHT 393 + RR + R++ + + + F R EL ESQ ++ + + Sbjct: 350 DFAHTRRIQTARQQAIKEAHLSN-DPIGLLTDFYRSQTENELSESQIAAIRTIIDEEVAA 408 >UniRef50_B9JT06 ATP-dependent dsDNA exonuclease protein n=3 Tax=Alphaproteobacteria RepID=B9JT06_AGRVS Length = 379 Score = 249 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 88/402 (21%), Positives = 157/402 (39%), Gaps = 26/402 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHT+D HLG+ S + + A LD +++ +T + D +I+AGD+FD +PP+ A Sbjct: 1 MKILHTADLHLGRQLNGLSLDEDQDAILDQIVDALRTTRADILIIAGDIFDRAAPPATAV 60 Query: 61 TLYNRFVVN-LQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 +N F+ +T + ++AGNHDS + + + L D Sbjct: 61 RQFNAFLSRVAAETTAAVAIIAGNHDSGDRIGAMAIMTDRRRALIQGPIARDMTPLVLHD 120 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 +PF A Q L A + D + + Sbjct: 121 AHGPVAFSALPFAYEFAARECFADPAIATPQDVLAAQVAD---------ARRSLPEGARW 171 Query: 180 IATGHLTTVGASKSDAVRDIY-IGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYC 238 + H G + + R + +G ++ + F A Y+ALGH+HR Q + H+RY Sbjct: 172 VVIAHAFVAGGTSGETERPLARVGGIETVSPEIFDGAHYVALGHLHRPQHVSA-PHIRYS 230 Query: 239 GSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRD 298 GSP+ SF E + K + LV +E ++ + + + L Sbjct: 231 GSPLAFSFGEASEQKSMTLVDLDADGRVRIETIDFNPPRAVRL--------LRGLLADLL 282 Query: 299 VSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLS 358 ++Q ++ +T L D ++++A+ + ++ R R E A Sbjct: 283 LAQPSQDFIKAVLTDPTPLIDPMKRLRAVFPN-ACQLTYARDERAP-ELKFAISTAAPAD 340 Query: 359 ELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHEA 400 L V F ++ E + E ++ + + L L E A Sbjct: 341 PLEVIADFIAQVRDEPISEPERALITAM----LDDLDAEENA 378 >UniRef50_C8XKJ7 Nuclease SbcCD, D subunit n=2 Tax=Actinomycetales RepID=C8XKJ7_NAKMY Length = 388 Score = 248 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 97/398 (24%), Positives = 171/398 (42%), Gaps = 19/398 (4%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ LHT+DWH+G+ +SR E +A + ++ A+ HQ+DA+++AGD++D+ +P + A+ Sbjct: 1 MKFLHTADWHVGKTLKGRSRLDEQRAVIGQIVGYAREHQIDAVLIAGDLYDSSAPTADAQ 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVAS----AGHAPQILP 116 L + ++ L+ TG ++ +AGNHDS AT + R ++ ++ T+V A Sbjct: 61 QLVVQALLALRDTGAKVLAIAGNHDSAATFDAYRPLLDAVDITLVGRVRPAARGGVVSFD 120 Query: 117 RRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQP 176 R + +PFL R + + + + ++ D + D+ Sbjct: 121 ARSTGERVNVAVLPFLSQRYAVRAAQLVASTPSE---MSRDYDAMVREVIDSLAAGFTPD 177 Query: 177 LPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPP-ADYIALGHIHRAQIIGGMEHV 235 + HLT VG + R PA FP A Y+ALGH+HR Q + V Sbjct: 178 AVSVMMAHLTVVGGTFGGGERAAQSIFEYHVPAVAFPAHAHYVALGHLHRRQTLPAPAPV 237 Query: 236 RYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQ 295 Y G+P + F E + V LV S ++ +L + + + + G A I + E+ Sbjct: 238 VYSGAPFAVDFGEQDNTSVVCLVQASPSTPATITDLPITAGRRLRTVHGTAAEIVGRAEE 297 Query: 296 WRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRE 355 + D +L + I + +T+ LP + VR E + R Sbjct: 298 FGD------DFLRVIIREPARAG----LREEITDVLPNALE-VRIDTEFALSITNQAART 346 Query: 356 TLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHT 393 + S E+F A + + + Q L L + Sbjct: 347 DHRDRSPAELFGDFCAARGVADERVQSLFERLHDELTS 384 >UniRef50_B7KZ12 Nuclease SbcCD, D subunit n=8 Tax=Alphaproteobacteria RepID=B7KZ12_METC4 Length = 415 Score = 247 bits (631), Expect = 4e-64, Method: Composition-based stats. Identities = 120/413 (29%), Positives = 185/413 (44%), Gaps = 32/413 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 +R+LHT DWH+GQ SRE EH A L +VDA++VAGDVFD+ +P ++ Sbjct: 2 IRVLHTGDWHIGQTLRGFSREREHDAVFGCLESIVVEREVDALVVAGDVFDSQNPSGESQ 61 Query: 61 TLYNRFVVNL--QQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP------ 112 + + L + +V+ AGNHD+ L R ++ + VV + Sbjct: 62 ARFYTLMARLHVARPAMTIVITAGNHDAAGRLEAPRPLLEAIGVHVVGNVRRRDGAIDLD 121 Query: 113 ---QILPRRDGTPGAVLCPIPFLRPR--DIITSQAGLNGIEKQQHLLAAITDYYQQHYAD 167 + +G A + + + ++S I + ++ A+ D Y Q + Sbjct: 122 RHLVPVRSANGEVAAQVLAVSYPTAACLPPLSSLGQPPRIGETSPIVRAVRDLYGQLFEA 181 Query: 168 ACKLRGDQPLPIIATGHLTTVGASKSDA-VRDIYIGTLDAFPAQNFP-PADYIALGHIHR 225 A LP++ TGHL G +S+ R I +G A P+ FP A Y+ALGH+HR Sbjct: 182 ARPRLA--GLPLLVTGHLHVAGGLESEGAERRILVGGEHAVPSDVFPEEARYVALGHLHR 239 Query: 226 AQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLK-- 283 AQ++ G VRYCGS IPLS E V LVT G +E++ +P P L Sbjct: 240 AQVL-GRGQVRYCGSLIPLSAAEQPYRHGVTLVTLGAG-AAEIEHIEIPRPVPFLRLPAS 297 Query: 284 -----GDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLV 338 DL L D+ E ++ + + + L + ++ + ES PV V+ V Sbjct: 298 GDMPLADLGDHLNALALDPDLPMEARPYIQVRLAREGLLPGYRAEVDRIAESFPVRVVDV 357 Query: 339 RRSREQRERVLASQQRET----LSELSVEEVFNRRLALEELDESQQQRLQHLF 387 R + QR +A ++ E LSE EE+F R + DE + +F Sbjct: 358 RVTVPQR-TAIAIEESEAPPPRLSERDPEELF-RLAFRAKWDEDPEPAHLDVF 408 >UniRef50_B6WA19 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6WA19_9FIRM Length = 364 Score = 245 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 86/397 (21%), Positives = 160/397 (40%), Gaps = 38/397 (9%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M++LH SD H+G+N S S + + LD +L+ + ++D +I+AGD+FDT P S + Sbjct: 1 MKLLHLSDLHIGKNIGSYSLLEDQKYCLDQILDIIKNEKIDIVIIAGDIFDTSIPNSESM 60 Query: 61 TLYNRFVVNLQ-QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 +Y+ FV + ++ ++GNHDS L S+ + + S+ L D Sbjct: 61 KVYSDFVDKIIFDLKKKIIAISGNHDSGKRLEISKSFFEKNSYYIFGSSFDKS--LTLED 118 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 PIP++ + + + TD Y+ D D Sbjct: 119 EFGLVNFYPIPYI---------SLARAKNEIDPNIENFTDLYRILLKDI-----DYNDRN 164 Query: 180 IATGHLTTVGASKSD----AVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHV 235 + H + D + + IG DA A F DY+ALGH+HR + E + Sbjct: 165 VLISHCYANEKAFEDEEIEGEKPLTIGGNDAMDANLFENFDYVALGHLHRKHFVID-EKI 223 Query: 236 RYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQ 295 RYCG+ + SF E + K V +V + S++ + + ++ +I Sbjct: 224 RYCGTFMKYSFSEVRQKKSVTVVDLKDN--ISIKEIEIRPLNDFCQIEDYFENILKM--- 278 Query: 296 WRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRE 355 + +++ + D+ + K++ P V + ++ E + Sbjct: 279 -----ENSNEYIEFILKDDQPIDSPMAKLKI---KFPHAVSIRYKNTIDLEGYDDIE--I 328 Query: 356 TLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLH 392 L LS E+F + + +DE+ ++ +F + Sbjct: 329 DLESLSTMEIFQKFYKFK-MDENMSEKDNEIFKKVIQ 364 >UniRef50_C7RGF6 Nuclease SbcCD, D subunit n=4 Tax=Anaerococcus RepID=C7RGF6_ANAPD Length = 371 Score = 244 bits (622), Expect = 6e-63, Method: Composition-based stats. Identities = 93/397 (23%), Positives = 163/397 (41%), Gaps = 40/397 (10%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR+LH SD HLG+N S E L +++ + VD +++AGD+FDT P + A Sbjct: 1 MRLLHLSDLHLGKNIGSYFLIEEQGFALAEIIKIIKEEDVDIVMIAGDIFDTIIPSAEAM 60 Query: 61 TLYNRFVVNLQ-QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 LY+ F+ + G ++ ++GNHDS L+ ++ N +V+ P + D Sbjct: 61 DLYSNFIEEIVFDLGKKVLAVSGNHDSSKRLDINKRFYRSNNYYLVSEYDKDP--ISFED 118 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 IPF+ I K + + + D + Y A + + + Sbjct: 119 DFGKVNFYLIPFI-------------SINKAKTIFDSSIDNFTDVYKYALEAIDYRDRNV 165 Query: 180 IATGHLTTVGASKSDAV------RDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGME 233 + T H S D + + IG DA A F DY+ALGH+HRA + Sbjct: 166 LIT-HCYASNMSSFDKEVYDEGQKPLTIGGTDAMDASLFEGFDYVALGHLHRAHYVLD-P 223 Query: 234 HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQL 293 +RY G+ + SFDE +K V LV + + + +P + +G I + Sbjct: 224 KIRYSGTFMKYSFDEENLTKTVSLVDLKD--KAEIRKIEIPFLRDFVTKRGMFEEILKE- 280 Query: 294 EQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQ 353 ++ ++ + D Y+H + + L E P V + ++ ER + Sbjct: 281 -------EKSEDYIKFILE-DSYIH--ENAMARLKEKFPRAVSITYANKAVFEREDSYDV 330 Query: 354 RETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTT 390 + + ++ E+F + +DE +Q+ L Sbjct: 331 --DIDDKNLLELFAEFYHFK-MDEDLKQKDTQLIQRI 364 >UniRef50_C5RC55 Exonuclease n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RC55_WEIPA Length = 398 Score = 243 bits (621), Expect = 6e-63, Method: Composition-based stats. Identities = 82/404 (20%), Positives = 164/404 (40%), Gaps = 21/404 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ LHT+DWH+G+ S AE Q + + A +VD +I+AGD++D G P A Sbjct: 9 MKFLHTADWHIGKELGGYSLLAEQQTAYQQIRDLAVNEEVDGVIIAGDLYDRGIAPISAV 68 Query: 61 TLYNRFVVNLQQT-GCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 + +L T + ++GNHD L R+ + + A + + +D Sbjct: 69 NSLEGMLKDLNITFKMPIYAVSGNHDGATRLGAGREWREKNQLYLNTTLADAFKPVETQD 128 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 + +PF+ P ++ E + I + ++ + + Sbjct: 129 T----QIFLLPFIEPS---MARVYYGITEDEASQYQTINQVMPRIVSEMVAQFKPEMNHV 181 Query: 180 IATGHLTTVGASKSD----AVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHV 235 + T H VG+ D + + +G L Q F DY+ALGH+H Q + V Sbjct: 182 LVT-HYYVVGSKNQDYEFTSETNSQVGGLRGLDDQLFQDFDYVALGHLHLRQA-SPSDVV 239 Query: 236 RYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQ 295 +Y GSPI + E K V++V N ++ + + +P + + +L G + + Sbjct: 240 QYSGSPIKFNTKEAQSEKGVYIVEIKNHQVRTSWHPLLP-KKDLILLTGTFEQLIDA-DF 297 Query: 296 WRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRE 355 ++ + + I+I + + + + + VEV Q + + + + Sbjct: 298 YQQYERGHKNYFSIKIQGHVTATNARAMLAEIYGDV-VEVKYDLPKLVQNRQDIPEIKAD 356 Query: 356 TLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHE 399 ++ + F + + ++L+ +Q++ + TL L + E Sbjct: 357 DGNDDVMIANFYQFVTGKQLNNNQKKLIDD----TLSQLHQQEE 396 >UniRef50_C7XXV6 Nuclease SbcCD n=1 Tax=Lactobacillus coleohominis 101-4-CHN RepID=C7XXV6_9LACO Length = 374 Score = 243 bits (621), Expect = 7e-63, Method: Composition-based stats. Identities = 75/397 (18%), Positives = 150/397 (37%), Gaps = 29/397 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR LHT DWH+G++ + A+ A + + + A+ QVDA+++AGD++D P A Sbjct: 1 MRFLHTGDWHIGKHLAGYNLLADQHATFEKIRQIAKAEQVDAMVIAGDLYDRTIPSEAAT 60 Query: 61 TLYNRFVVNLQQTG-CHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 + L + ++GNHDS L + + A + D Sbjct: 61 RELTSELAELNIHDQLPIFAISGNHDSATRLGVGSQWFTSNDFYLNTKFSQAFMPIEFAD 120 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 L +PF +++ A + I+ + I ++ + D + Sbjct: 121 T----QLFLLPFFGLQEVRNYFAD-DQIKDINTAMKKIVAAMKKRFVDGKRH-------- 167 Query: 180 IATGHLTTVGASKS-DAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYC 238 + H G+ ++ D+ I +G L A DY+ALGH+H + ++Y Sbjct: 168 VLVAHFFAAGSQRTADSETMIEVGGLSAVNTDLLTDFDYVALGHLHNKNALQEA-RIKYS 226 Query: 239 GSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRD 298 GSP+ S E K V +V + ++ + +P + V++ + +T Sbjct: 227 GSPMKFSVSEANMEKGVWIVDTAP---FNIRWVELPAIHEIHVIESSMDQLTDP---TFA 280 Query: 299 VSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLS 358 + I++T + + D+ +++ + L + + S Sbjct: 281 KQYSKEDYYAIKLTDRQIIPDVMNRLRQYYPQ--IISLGRKYGFAGPHENYHHLNQRQ-S 337 Query: 359 ELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLA 395 + F + +L+ Q++ + TTL + Sbjct: 338 PKQLFANFFEKTVGTKLNAEQEKIVD----TTLAEMQ 370 >UniRef50_C9LH67 Exonuclease SbcCD, D subunit n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LH67_9BACT Length = 413 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 101/426 (23%), Positives = 171/426 (40%), Gaps = 41/426 (9%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M++LHT+DWHLG FY REAE + +L WL +T Q D +++AGDVFD +P + A Sbjct: 1 MKLLHTADWHLGNAFYGYDREAEFKHYLAWLRQTLAEQQPDVLLIAGDVFDHPNPSAEAE 60 Query: 61 TLYNRFVVNLQQ--TGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRR 118 ++ RF+ + +G +VV+AGNHDS A L ++ N V + P P Sbjct: 61 KMFFRFLCTAAEEVSGLQIVVIAGNHDSGARLEAPAGLLYLHNIYVRGTIERLPDGTPDF 120 Query: 119 D-----------GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYAD 167 D V +P+LR D G+ Y++Q + Sbjct: 121 DRLILPLSRRDNNEAEIVCFAVPYLRSGDYPAGMTQEEGLHY----------YFEQLWKH 170 Query: 168 ACKLRGDQPLPIIATGHLTTVGASKSDAV--RDIYIGTLDAFPAQ-NFPPADYIALGHIH 224 + + LP+I H A S+ + +G D A YIALGHIH Sbjct: 171 L-RKSDFRGLPVIPLAHYYAADARLSETEHSERLVVGGQDRVEGDVAGRDAAYIALGHIH 229 Query: 225 RAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLK- 283 RAQ + + Y GS +P+SF E L+ V L + + + Sbjct: 230 RAQEV--RKRTFYAGSILPMSFSEKYYDHGAQLIELDEEGRAGVSRLTYTPLRQLKSIPE 287 Query: 284 ------GDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQ--RKIQALTESLPVEV 335 G++ + ++L + R+ E W +E+ E + Q + ++ V Sbjct: 288 KGAASAGEVLELISRLPR-REKDDEGLGWPYLELRVKEEQPEPQFLHDVTTALQTKAVRF 346 Query: 336 LLVRRSR-EQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTL 394 + R + E + ++ + E+ +++ ++ + + LQ F + Sbjct: 347 CRILREQPEVTGTERSMPDVVNVTTTTPLEL-AQQVFQDKYGKPLPEALQTRFAEAAEDV 405 Query: 395 AGEHEA 400 + A Sbjct: 406 ITDRHA 411 >UniRef50_C3WDH5 Nuclease SbcCD n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WDH5_FUSMR Length = 407 Score = 241 bits (615), Expect = 4e-62, Method: Composition-based stats. Identities = 94/420 (22%), Positives = 163/420 (38%), Gaps = 34/420 (8%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLG+ R E + F+D L + I++AGD+FDT SP S A Sbjct: 1 MKILHTSDWHLGKKLEGAKRIEEQKLFIDTLEKIVTDENPKLILIAGDIFDTPSPSSEAE 60 Query: 61 TLYNRFVVNLQQTGCH-LVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQI----- 114 L+ + + G +V++ GNHDS L S+++ + + +I Sbjct: 61 KLFFDAMKKISNFGKRAIVIIPGNHDSAERLVASKNLAKDFGIIIYENPLEVKEIGEYGQ 120 Query: 115 ----------LPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQH 164 L L +P++ + + ++++ + D Sbjct: 121 FQVERATEGGLILNIEGERVFLYSLPYVSEAYLDEMYKNVLVEKEEELGESIDGDLTYSE 180 Query: 165 YADACKLRG-----DQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIA 219 A RG + +P I HL +G+ R+ +G + P DYIA Sbjct: 181 KIGALLKRGVVEVESENIPKIIMAHLFIMGSVGDGDEREAELGGSKGVDLDDLPEVDYIA 240 Query: 220 LGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPM 279 LGHIH+ + Y GSPI E K + L ++ + + +P+ Sbjct: 241 LGHIHKPMKYS-RKRACYSGSPIEYRVTENRYKKKIFLADVKGDLDTEIKEIELENYKPI 299 Query: 280 AVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVR 339 K ++ I LE + + W+ ++I TD YL +I+ L ++ + + V+ Sbjct: 300 K--KYEVKGIDKALELSQSLVGVQE-WIYLKIVTDRYL--ASSEIRELRKNKNIVEIDVK 354 Query: 340 RSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHE 399 E + + EL ++E F + E + + LF + GE + Sbjct: 355 YVDENEGENITYYEN---GELDIKESFKEYYKKFDGIE-PSEEMVELFMRL---VEGEEQ 407 >UniRef50_A8L1U9 Nuclease SbcCD, D subunit n=2 Tax=Actinomycetales RepID=A8L1U9_FRASN Length = 387 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 98/388 (25%), Positives = 170/388 (43%), Gaps = 18/388 (4%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ LHTSDWHLG+ ++R E +A L ++ A+ H+VDA++VAGDV+D+ +PP+ A+ Sbjct: 1 MKFLHTSDWHLGKTLKGRNRLDEQRAVLGEIIGIARKHEVDAVLVAGDVYDSAAPPAAAQ 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVAS----AGHAPQILP 116 L + +V L+ TG +VV+AGNHD T + R +M+ T+V + A Sbjct: 61 QLAVQALVALRGTGAEVVVIAGNHDHQPTFDAYRPLMSAAGITLVGTPRTAADGGVVTFR 120 Query: 117 RRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQP 176 + +PF+ R + + + Q AA D + + + D Sbjct: 121 APGTGEPVTVAALPFVSQRYAVRAADLVTQTPDQT---AARYDQVVRALMEQLRSGFDDN 177 Query: 177 LPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFP-PADYIALGHIHRAQIIGGMEHV 235 + HLT R A FP A Y+ALGH+HR Q + V Sbjct: 178 AVNLVLAHLTVTNGLFGGGERMAQSIFEYHVSAAAFPADAHYVALGHLHRRQTLAAPCPV 237 Query: 236 RYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQ 295 Y G+P+ + F E + V LV S G V ++ + + + ++G +A + AQ + Sbjct: 238 VYSGAPLAVDFGEQENTNVVCLVEASPGVPAQVTDIALTAGRRLRTVRGTVAELAAQAPE 297 Query: 296 WRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRE 355 + L + + ++ ++Q L LP + + + + Sbjct: 298 LAE------DLLRVVVREPAR-AGLRDEVQEL---LPNALEVGIDPELRVALGGSRPSAA 347 Query: 356 TLSELSVEEVFNRRLALEELDESQQQRL 383 L+ S E++F A E+ ++ + + L Sbjct: 348 ALARRSPEDLFREFCAAEQFEDPRVEAL 375 >UniRef50_C2BSE2 Exonuclease SbcD n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BSE2_9ACTO Length = 413 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 97/424 (22%), Positives = 167/424 (39%), Gaps = 45/424 (10%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ +HTSDWHLG++F + FL +L H+ DA++++GDV D +P Sbjct: 1 MKFIHTSDWHLGRDFMNYDLAPYQDDFLGQILAQIAAHRPDAVLISGDVLDKPNPGDADL 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDI-MAFLNTTVVASAGHAPQILPRRD 119 + F+ + ++++AGNHD + L ++ + +N A+ +PR D Sbjct: 61 DKLSDFLNQ-ARRMTRVILIAGNHDGASRLGFAKGFTLPEVNIVTKAAQVGTAIEIPRPD 119 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYY-------------QQHYA 166 G GA++ PIP+L P T + + +HL A+ + +A Sbjct: 120 GELGALVYPIPYLYPYQDRTELSTWVDTDGVRHLDDALDPPPSEDDPDPVFPGKPEALFA 179 Query: 167 DACK------LRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPP------ 214 A + R D +P++A H + + +G L P Sbjct: 180 AALRRIARDLHRRDTDVPVLAMAHDFLSPVREMEP-----LGNLSPIPVSLLDDLAGGLK 234 Query: 215 ----ADYIALGHIHRAQIIGGME-HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVE 269 DY+ALGHIH+A + G Y GSP+P E K LV V+ Sbjct: 235 GGRGIDYLALGHIHQAFQLSGTNVAAWYAGSPLPYRVSE-HNVKGTLLVQIDPNHQVEVQ 293 Query: 270 NLNVPVTQPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTE 329 L + + + L+G + +T + + + I +T + +++A+ Sbjct: 294 RLALELPYEVKQLEGSIEDLTNPADPR--YQRWHHAFCSINLTETILPPNAYNRLKAV-- 349 Query: 330 SLPVEVLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTT 389 P + L R E + + + LSEL + F R ++ E L+ LF Sbjct: 350 -FPRMLTLTHRQDSLPETLSSGTEFRELSELEIATEFLRTCGID--TEEDLALLRKLFEN 406 Query: 390 TLHT 393 T Sbjct: 407 TFEG 410 >UniRef50_Q1J058 Nuclease SbcCD, D subunit n=3 Tax=Deinococcus RepID=Q1J058_DEIGD Length = 395 Score = 235 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 102/407 (25%), Positives = 174/407 (42%), Gaps = 24/407 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR+LHT+D+H G+N R E L + A++ + D ++V+GD+FDT +P + A Sbjct: 1 MRVLHTADFHAGRNLRGFDRTPEIHEALVEIAGLARSEKADVVLVSGDLFDTVNPSAEAE 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 F + L+ V +AGNHDS A L+ ++ ++ +VA P + R Sbjct: 61 AAVFDFFLRLRDANIPAVAIAGNHDSAARLHSLAGLLGWVGVQLVAQPTANPLDMIRTVE 120 Query: 121 T---PGAVLCPIPFLRPRDIITSQAGLNGIEK--QQHLLAAITDYYQQHYADACKLRGDQ 175 T + +PFL R ++ + + G +Q + + ++ A RGD Sbjct: 121 TRQGERLTVGALPFLSERRLVKAADLMGGEVGAWRQKYREGMGFFLRKL---AEGFRGDS 177 Query: 176 PLPIIATGHLTTVGASKSDAVRDIYIGTLDAF---PAQNFPPADYIALGHIHRAQIIGGM 232 + H T GA S + R + ++A+ P Q A Y+ALGH+H+ Q M Sbjct: 178 --VNMLMLHATMDGAVPSGSERTMQFDLMNAYTLSPLQLPAGAQYVALGHVHKPQPASEM 235 Query: 233 EHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQ 292 Y GS I L F E G+ K V+LV G+ + + + + + +K +L + ++ Sbjct: 236 PLAHYPGSIIQLDFGEGGEKKQVNLVEVEAGRPARIIPVPLSSGRELRTVKVNLDQVESR 295 Query: 293 LEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQ 352 L + V + ++ + L ++ ++ L V Q + VL Sbjct: 296 LAALTNFPG--LVKVVVQAPSGTALPGLKDRVLRQVPG----ALAVELDALQDDLVLPEL 349 Query: 353 QRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHE 399 +RE LS + E F + E D+ L+ F GE E Sbjct: 350 RREGLSLAELYERFWQERRGELPDD-----LRAAFREADEAARGEAE 391 >UniRef50_A3HX94 DNA repair exonuclease n=2 Tax=Bacteroidetes RepID=A3HX94_9SPHI Length = 414 Score = 233 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 86/419 (20%), Positives = 164/419 (39%), Gaps = 36/419 (8%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 ++ILHT+DWHLG+ SR E + L+ ++E A VD +++AGD+FDT +P A Sbjct: 2 IKILHTADWHLGKRLQEFSRIEEQKLVLEEIIEVADQENVDLVLLAGDIFDTFNPNHEAV 61 Query: 61 TLYNRFVVNLQQTG-CHLVVLAGNHDSVATLNESRDIMAFLNT------TVVASAGHAPQ 113 L + + L + G ++ ++GNHDS + + L + G Sbjct: 62 ELLYKTLRRLSKNGERPIIAISGNHDSTQFVEAPDPLARELGILFYSRYDSIIPIGKLDS 121 Query: 114 ILPRRDGTPGAVLCPIPFLRP--RDIITSQAGLNGIEK---QQHLLAAITDYYQQHYADA 168 + G V +P + R I+ A N ++ + A + Q+++ + Sbjct: 122 GIEITKSASGFVELKLPKIEFPVRIILAPYANENLLKTYLGEGDREAEFREILQENWLEL 181 Query: 169 CKLRGDQPLPIIATGHLTTVGASKS----------DAVRDI-YIGTLDAFPAQNFP-PAD 216 D + GH + +S ++ R I ++G A +N P Sbjct: 182 ADNYCDDNGVNLFIGHFFFMKEGESSVAIGTEAEPESERPILHVGGTQALFTKNIPSQIQ 241 Query: 217 YIALGHIHRAQIIG-GMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPV 275 Y ALGH+HR +G V Y SP+ SF E + K V ++ + + + + Sbjct: 242 YAALGHLHRYHSVGHEHCPVVYSSSPLAYSFSEADQEKKVVILKAAPNQEVEYHPVGLKQ 301 Query: 276 TQPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRK-IQALTESLPVE 334 +P+ + ++ L + P +++I T+ + RK I + + Sbjct: 302 GRPLY--RKKFDNLPETLAWLEE---NPYCFVEITYVTEHSIDAATRKAIMKAHDGIVNL 356 Query: 335 VLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHT 393 + + + L + S+ ++F + +E +E L +F + Sbjct: 357 IPQINNPAGTEDLSLQVEDLGK-DMSSLFQLFYKSEKGQEPNEE----LMEIFREVISQ 410 >UniRef50_B2S3L6 Possible exonuclease n=2 Tax=Treponema pallidum RepID=B2S3L6_TREPS Length = 391 Score = 233 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 84/409 (20%), Positives = 159/409 (38%), Gaps = 31/409 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHT+D HLG+ + S A + L L A+I+AGD++D P + + Sbjct: 1 MKILHTADLHLGKTLHEVSLFASQKKMLGDLCTLLAQDNYAALIIAGDIYDRCVPSAESV 60 Query: 61 TLYNRFVVNLQQ--TGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRR 118 +L++ F+ N+++ + ++ GNHDS L+ +++++ + + + Sbjct: 61 SLFSSFLQNIKRSMPRLPIYLIPGNHDSAQRLSFAQELLKQQGVFIAQDPEESTRPHLLC 120 Query: 119 DGTPGAVLCPIPFLR--PRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQP 176 L +PFL + + I Q LL + Q+ + Sbjct: 121 HEGETVQLFLLPFLHAGAFSYLDEENTTCLIHTQSELLQEASRRLQRAVSL--------D 172 Query: 177 LPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVR 236 P I HL T ++ R ++G F Y+ALGH+H+ Q I E + Sbjct: 173 TPSILVAHLFTQKGISCESERP-FVGNAVYADPHWFDFFTYVALGHLHKCQKI--TERMY 229 Query: 237 YCGSPIPLSFDECGKSKYVHLVTF---SNGKLESVENLNVPVTQPMAVLKGDLASITAQL 293 Y GSP+P SFDE K V + G V L + P+ ++ ++ Sbjct: 230 YSGSPLPYSFDEANTQKVALSVEIHCNTKGFPIHVTPLPLEPLIPLRTIRDSFHALYTG- 288 Query: 294 EQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQ 353 +++ ++ +L+I +T +H+ I L P + + + + + Sbjct: 289 DRYLLYQRD---FLEITLTDPALVHNP---IGLLKPRYPGLLSIKQENAFAFDIPPPYSS 342 Query: 354 RETLSE------LSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAG 396 E ++ + +VF ++ D + Q LF + Sbjct: 343 NEGIAPCTHHSLRTHFDVFMHEVSPTPDDREKGALFQELFDEMQQEFSS 391 >UniRef50_B5HB15 Nuclease SbcCD n=1 Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5HB15_STRPR Length = 412 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 98/407 (24%), Positives = 150/407 (36%), Gaps = 28/407 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR+LHTSDWHLG F+ +RE + A L ++ AQ Q D I+ +GD+F P A Sbjct: 1 MRLLHTSDWHLGHIFHGHAREEDFDAVLAEIVAIAQESQPDLIVHSGDLFHHSRPTIRAM 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNE---------SRDIMAFLNTTVVASAGHA 111 + ++ L VVLAGNHDS A R + + Sbjct: 61 SRAMDTLIELAAI-APTVVLAGNHDSPAYFKFFGSMNGPLRGRGLFFADRF--RPADDGG 117 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 G L +PF+ P A + + + + Sbjct: 118 VLTFDACGGEQQIRLAVLPFVHPNHFWQHSATGTSYADYAEGMRGLQAQLMRAMHEGYDP 177 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG 231 D ++ H+ GA S R + +N P Y ALGHIHR Q + G Sbjct: 178 DRD---ILLFAAHVYVTGAQGSRGGR--AVDDRFETGPENLPEVSYAALGHIHRPQPVRG 232 Query: 232 MEHV-RYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASIT 290 + + RY GSP+ + F E +SK V +V G+ + + +A G L + Sbjct: 233 AKCIARYAGSPLAMDFGEADESKSVVIVDADPGRPVRALPRRLSSGRRLAHFPGTLEELK 292 Query: 291 AQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLA 350 A +Q +L I +E + +KI + + +LV + A Sbjct: 293 AA------AAQYDGTFLKAVIAGEEPDGLLSQKIAEIVPN----AILVNPVPAREAAAEA 342 Query: 351 SQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGE 397 + E + + F LA E L + + FT L+ L E Sbjct: 343 VMDGDPGEEPELPDAFRAYLASEGLSGAAAESTVTAFTHLLNELDDE 389 >UniRef50_O51769 Nuclease sbcCD subunit D n=23 Tax=Borrelia RepID=SBCD_BORBU Length = 413 Score = 231 bits (589), Expect = 4e-59, Method: Composition-based stats. Identities = 99/413 (23%), Positives = 181/413 (43%), Gaps = 36/413 (8%) Query: 2 RILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYART 61 +ILHTSDWH+G+ + S E + FL +LLE + +D ++VAGDV+D+ P + Sbjct: 5 KILHTSDWHIGKKIENFSILKEQKNFLYFLLEFIKKENIDLLLVAGDVYDSKRPGFEEQR 64 Query: 62 LYNRFVVNLQQTGCHL-VVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD- 119 L N F L T C VV++GNHD L+ ++ +++ N ++ QI+ +D Sbjct: 65 LVNNFFYELSFTSCKWCVVISGNHDKKDYLSINKKLLSRFNFFLITEYDSDEQIVLLKDN 124 Query: 120 GTPGAVLCPIPFLRPRDIITSQ----AGLNGIEKQQHLLAAITDYYQQHYADACKLRGD- 174 G ++ +P + R I+ GL + L + + Y++ ++ + Sbjct: 125 GNLKFIVVCLPHINERLILGQNFDNIFGLEDQYSSKLFLENLENAYREKISNLSNFLENK 184 Query: 175 -QPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNF-PPADYIALGHIHRAQIIGGM 232 + +P I H + K D +G P F Y+ALGHIH+ + Sbjct: 185 YKGIPKILMAHSFFGSSKKID-----TLGGSYIIPFNVFGNGFSYVALGHIHKFMKL--R 237 Query: 233 EHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQ 292 +++ Y GSP+ SF+E KY++++ F++ KL E VP+ + KG L + Sbjct: 238 DNIVYSGSPMQYSFNETCD-KYINVLHFNDNKLILQEAFPVPIFNKLIFAKGSLNEVLDF 296 Query: 293 LEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRR----SREQRERV 348 L + + ++L IE+ + + I L + ++ + S++ ++ Sbjct: 297 LANSKKE-ESFTIYLKIELN-EAVDTSAEESIYDLARLNFMNLVSISYSLPSSQDLQDDS 354 Query: 349 LASQQRETLSELSVEEVFNRRLALE---------ELDESQQQRLQHLFTTTLH 392 + E L E+ + F ++L + + E + L LF L Sbjct: 355 NFIGELEVL-EMDEKYFFEKKLRWDFENGVIRDIKFKEEE---LISLFNEVLA 403 >UniRef50_D1PAG0 Nuclease SbcCD, D subunit n=1 Tax=Prevotella copri DSM 18205 RepID=D1PAG0_9BACT Length = 481 Score = 230 bits (586), Expect = 8e-59, Method: Composition-based stats. Identities = 98/446 (21%), Positives = 183/446 (41%), Gaps = 71/446 (15%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+IL TSDWHLG F+ R EH+ FL WLLE + DA+++AGD+FD G+P + A+ Sbjct: 47 MKILATSDWHLGNLFHGNDRLPEHKHFLKWLLEQIAEQKPDALLIAGDIFDNGNPSAAAQ 106 Query: 61 TLYNRFVVNLQQ--TGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAG--------- 109 T+Y F+ + Q +++ AGNHDS + L R ++ + + + Sbjct: 107 TVYYEFLADATQLCPNMQVIITAGNHDSASRLEAPRPLLTRYHVEIRGNVRKIWKQGESE 166 Query: 110 -------------HAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAA 156 I + ++ +PFLR + + + Sbjct: 167 DDDKTGGHWIYSFDDLIIPVTNEAGEEVIILAVPFLR-----------SDVVQNASYSQG 215 Query: 157 ITDYYQQHYADACKLRGDQPLPIIATGHLTTVGA--SKSDAVRDIYIGTLDAFPAQNFPP 214 + D+ ++ A+A + + I H+ G+ +K DA I IG + + + Sbjct: 216 VNDFLRELTAEARQKYPGRKC--IMMAHMYAKGSDIAKKDASEKIIIGGQEEVDLEGWND 273 Query: 215 -ADYIALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHL-----------VTFSN 262 DY+ GHIH+ Q I + RY GS +P+SF E + + L Sbjct: 274 HPDYMTCGHIHKRQHIWNTDWARYTGSILPMSFAEKDYTHGIDLITIEHGEEEEGKETGK 333 Query: 263 GKLESVENLNVPVTQPMAVLKGDLASIT---------AQLEQWRDVS-QEPPVWLDIEIT 312 K V+ L + +L D +T ++L + D + ++ +++ Sbjct: 334 SKEWKVDFLEYKPQHALRILPEDEEELTFKKWQKLINSELSERTDGELSDHFDYVMLKVK 393 Query: 313 TDEYLHDIQRKIQALTESLPVEVLLVRR--SREQRERVLASQQRETLSEL-------SVE 363 ++ D ++++ L + ++R + + SQ ++ ++ +++ Sbjct: 394 QEKLTSDDIKELEKLVNEKDAVLCKIQRIIPQLDLSTIQGSQHITSIEDIINRPPLDTLK 453 Query: 364 EVFNRRLALEELDESQQQRLQHLFTT 389 E F R ++E Q++ L L TT Sbjct: 454 EAFAIR-HNAPMNERQEKMLSDLLTT 478 >UniRef50_C1XNQ0 Exodeoxyribonuclease I subunit D n=2 Tax=Meiothermus RepID=C1XNQ0_MEIRU Length = 387 Score = 228 bits (580), Expect = 4e-58, Method: Composition-based stats. Identities = 89/397 (22%), Positives = 148/397 (37%), Gaps = 28/397 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHT+DWHLG+ + R E + L LL ++ +++ ++VAGD+FD + A Sbjct: 1 MRILHTADWHLGKVLKGRERTPEIRQALQALLGLVRSERIELVLVAGDLFDRSVVSTEAE 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 F V L++ +V+AGNHDS L +++ TV + A Q Sbjct: 61 AAAFEFFVGLRELQVPALVIAGNHDSRERLEALSPLLSLTGATVFGNLRFAEQGGVVE-- 118 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL------RGD 174 GA + +PFL R ++ K LL +++ Y L G Sbjct: 119 ALGARVALLPFLSERRLV----------KAGDLLQGDGAEWKKTYGQGMGLILKNLATGF 168 Query: 175 QPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPP-ADYIALGHIHRAQIIGGME 233 + HLT G + A +FP Y+ALGH+HR Q + Sbjct: 169 SGDLNLLMAHLTVEGGQLGGGEFTFHTTNTYAIQPGDFPQTLSYVALGHLHRQQQVCEAP 228 Query: 234 HVRYCGSPIPLSFDE-CGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQ 292 Y GS I L F E + +V + G V + +P+ + ++ + Sbjct: 229 LAWYAGSLIQLDFGEGENSDRGALIVEVAPGLPARVHPIRERWGKPLKTFRLSRETLDRR 288 Query: 293 LEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQ 352 E+ R P + I I + L + LP + + + E + Sbjct: 289 WEEVR----TFPGYSKIVIEG----PGNAALRERLFKELPDLLEVEFHTPEAEIKGPTPV 340 Query: 353 QRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTT 389 E L + + R +E + + ++ Sbjct: 341 DTENLDWVEAYAEYRRTTTAKEASPELLEAFKQVYEE 377 >UniRef50_Q5SIS5 Exonuclease SbcD n=3 Tax=Thermus RepID=Q5SIS5_THET8 Length = 372 Score = 227 bits (578), Expect = 7e-58, Method: Composition-based stats. Identities = 92/399 (23%), Positives = 147/399 (36%), Gaps = 33/399 (8%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR+LHT+DWHLG+ R E A L LL ++ +VD ++V+GD+FD + A Sbjct: 1 MRLLHTADWHLGKLLKGVDRTPEIAAALRDLLGLVRSERVDLVVVSGDLFDRPQVSAEAE 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 F + L+ G +V+AGNHD L ++ V A + G Sbjct: 61 ACAVEFFMELKALGVPALVIAGNHDPKERLEALAPLLGLAGARVRGRLLFAEEGGVVEVG 120 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 A L PF+ R ++ + + + YA+A + D + Sbjct: 121 GVRAGLL--PFVSERLLVRRLFQED-------------EVLHRTYAEALRRVLDNLKSPL 165 Query: 181 ATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFP-PADYIALGHIHRAQIIGGMEHVRYCG 239 GH GA ++ A P + P Y+ALGH+HR Q + Y G Sbjct: 166 LLGHFAVEGARPGGGEFVFHLVGSYAVPRASLPLEVRYLALGHVHRQQQVSEAPVAWYPG 225 Query: 240 SPIPLSFDE-CGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRD 298 S + L F E G + LV V + +P+ + + ++ + Sbjct: 226 SLVQLDFGEGEGAERGALLVELPPSGPPRVHPIPGRWGKPLRTYRLRPEELDGRMGEL-- 283 Query: 299 VSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLS 358 + P +L + + + +AL L VE ++ +RE V Sbjct: 284 --ERFPGYLRLVVEGRLSPQVKENLFRALPHLLAVEGAPLQAGEGRREEV---------Q 332 Query: 359 ELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGE 397 +L E + R L E L F L + GE Sbjct: 333 DLGFVEGYARYLEERGRKEE---ALLERFAEVLAEVEGE 368 >UniRef50_C2KSA5 Possible exonuclease SbcD n=2 Tax=Mobiluncus mulieris RepID=C2KSA5_9ACTO Length = 422 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 93/433 (21%), Positives = 161/433 (37%), Gaps = 54/433 (12%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLG+ FY + FL +L + Q DA+++AGDV D +P Sbjct: 1 MKILHTSDWHLGREFYGYDLREYQEQFLAQMLGLLREFQPDALVIAGDVLDKKNPADVDV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVV--ASAGHAPQILPRR 118 + + F+ + CH+V+++GNHD + L D++ + +V S P +P R Sbjct: 61 LMLSEFICAANEY-CHVVIISGNHDGASRLGFLSDVLHRVGVHIVSRGSQVGIPIEIPNR 119 Query: 119 DGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLR------ 172 +G L PIP+L P + E H A + ++A + R Sbjct: 120 EGNLAGRLYPIPYLYPHQEREELSTWTDTEGNPHPDAWLEQNAAHSESEAPQQRLLPGKT 179 Query: 173 -----------------GDQPLPIIATGH--LTTVGASKSDAVRDIYIGTLDAFPAQNFP 213 + +P+I H T D V +G+L Sbjct: 180 GIINAAALRRIGNDILARGRTVPLIGIAHDNFTKNFTPPEDEVGKYTVGSLPNVDNTVLA 239 Query: 214 ----------PADYIALGHIHRAQII---GGMEHVRYCGSPIPLSFDECGKSKYVHLVTF 260 DY ALGHIH+ + G E Y GSP+P + D+ KYV V Sbjct: 240 TLGGVVSGNQGLDYFALGHIHKCYPVIKSSGFE-AWYSGSPLPYATDDTND-KYVLAVEI 297 Query: 261 SNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDI 320 + +VE + + + + ++ + + I +T + + Sbjct: 298 NPAHEVTVEKIPLSMPYQVCEFNDSFENLLNL--GNPKYAGLHDAFCQITLTENYTPENA 355 Query: 321 QRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQ 380 ++I+++ + R + A E +S L + F L + E Sbjct: 356 LQRIKSIFPR------MTRLQTSSKTGGTAKWVTEAVSPLEFTKTF---LKNAQCSEEAI 406 Query: 381 QRLQHLFTTTLHT 393 ++ ++ + Sbjct: 407 LLVETIYEELVKG 419 >UniRef50_B4U9G5 Nuclease SbcCD, D subunit n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U9G5_HYDS0 Length = 380 Score = 222 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 78/407 (19%), Positives = 161/407 (39%), Gaps = 36/407 (8%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 ++ LH D H G+ +S+SR + + + +++ + VD I++AGD+FD +P + A Sbjct: 2 IKFLHIGDIHAGKTLHSRSRNDDAEYAISQVIDFVKKEPVDFILMAGDIFDQYTPDAEAT 61 Query: 61 TLYNRFVV-NLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 + F+V L +V++ GNHD + + + + N + I+ +D Sbjct: 62 KIIFDFMVSELNALKIPVVMITGNHDGHSFFEGYKTLAKYANMHLFVKPSTKDYIITIKD 121 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 + +P++ + + + E + +++ +A + + Sbjct: 122 TN----IICVPYVFTKILDKTWEDNAASEYAHKV---------ENFINALISKAPRNTFN 168 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQ---NFPPADYIALGHIHRAQIIGGMEHVR 236 I H+ A + + R+ IG A N DY+ALGH+H+ Q I Sbjct: 169 ILLSHMMVKSAKPTKSEREASIGEYYAINLDNINNLKNLDYVALGHVHKYQKIPTTTDTY 228 Query: 237 YCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASI-TAQLEQ 295 Y GS + F+E G+ KY + V VE + + + + LK + S+ +E Sbjct: 229 YTGSCFQIDFNEEGQEKYFNFVILEQQSTNKVEKIKLDIKNQLKTLKVNAKSLNIKDIEN 288 Query: 296 WRDVSQEPPVWLDIEITTDEYLHDIQRKIQALT-ESLPVEVLLVRRS--REQRERVLASQ 352 + + + D+ + + + LT E + ++L +RR+ + V ++ Sbjct: 289 VKG---------YVRVIIDDTIENTRLLESKLTSEHIAGKILEIRRNVFEKPDIEVDLNK 339 Query: 353 QRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHE 399 R L + F + E + L+ F + + + Sbjct: 340 IRNNLVD------FYEEYYKAKYREDLPEDLKKAFVELQYKVEHTED 380 >UniRef50_B5YJR9 Exonuclease SbcD n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YJR9_THEYD Length = 387 Score = 222 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 92/417 (22%), Positives = 161/417 (38%), Gaps = 54/417 (12%) Query: 1 MRILHTSDWHLGQNFYS--KSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSY 58 ++ILHTSDWHLG+ F + +D +++ + D +++AGD+FDT +P Sbjct: 3 LKILHTSDWHLGKVFKETTFELLPIQKQIMDEIVDITRKENPDIVLIAGDIFDTYNPSFE 62 Query: 59 ARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP------ 112 A ++ + L + C + LAGNHDS L S+ ++A ++ + S Sbjct: 63 AEKIFYETLSRLSEQNCFVFALAGNHDSPDKLQISKPLIAGKHSIFIKSTAFDESKDIEF 122 Query: 113 -----------QILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYY 161 L G V+ ++ AG ++K LL+ + Sbjct: 123 ENENFKLALENSFLKLHLKNEGTVIALKCLPYLSEVRLGLAGDEYLKKVNELLSIEPQFS 182 Query: 162 QQHYADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPP-ADYIAL 220 ++ + T HL+ GA +S + R IG ++ P P A YIAL Sbjct: 183 CDYF--------------LLTSHLSIAGAQQSGSERIFQIGGIEYIPIDFLPKSAHYIAL 228 Query: 221 GHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMA 280 GH+HR Q + + Y GS P E K V + + NGK + +E +P + + Sbjct: 229 GHLHRHQKL---RNATYSGSIYPFDLAEIEHKKGVSV--WENGKPDFIEFNKIPKIRKIE 283 Query: 281 VLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRR 340 LE + E + + I I AL ++ ++ + Sbjct: 284 ---------FDSLEDAVKNAPEDEAYYYVLIKNPHAYTTAS--IDALLKAYRNRLVNWQF 332 Query: 341 SREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGE 397 ++ + +L+E + F R +L++ Q + LF TL + Sbjct: 333 YTPDVPEEISIPELHSLNEEEMFIEFYR----AKLNKKPSQDILSLFLKTLEEVKNA 385 >UniRef50_D2MIT5 Exonuclease subunit SbcD (Fragment) n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MIT5_9BACT Length = 233 Score = 221 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 84/236 (35%), Positives = 123/236 (52%), Gaps = 9/236 (3%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHT+DWH+GQ + + R EH+ FL+WLLET Q HQV+ ++V+GD+FDT P S + Sbjct: 1 MKILHTADWHIGQRLHERQRTDEHKRFLEWLLETIQAHQVELLLVSGDIFDTALPSSEST 60 Query: 61 TLYNRFVVNL-QQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ-ILPRR 118 LY RF+ L +T + V+ AGNHDS L R+ + VV +A + ++ Sbjct: 61 NLYYRFLYRLFSETDAYTVITAGNHDSPRHLEAPREFLEMGRIYVVGTADEPTKCVVTLP 120 Query: 119 DGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLP 178 P + +PFL D+ +++ + ++ YAD C LP Sbjct: 121 RENPRIAVAAVPFLSESDLRHLSYETEVDRNERY-----RERFKTFYAD-CVANMPAELP 174 Query: 179 IIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFP-PADYIALGHIHRAQIIGGME 233 I GHL G D+ R++ IG A A +FP Y+ALGH+HR Q I G + Sbjct: 175 KILMGHLFVQGGQVGDSERNVQIGGATATHASDFPKDVSYVALGHLHRPQTIKGTD 230 >UniRef50_D0LLB1 Nuclease SbcCD, D subunit n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LLB1_HALO1 Length = 423 Score = 220 bits (561), Expect = 6e-56, Method: Composition-based stats. Identities = 97/409 (23%), Positives = 163/409 (39%), Gaps = 24/409 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M++LH SDWHLG+ Y SR ++H A +D ++E A+ D ++ GD+FDT P Sbjct: 1 MKLLHVSDWHLGRTTYGASRASDHDAVIDQMVEEARALGPDLVLHTGDLFDTARPSYDDM 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP----QILP 116 + L +VV+ GNHDS A L ++ + AS P + Sbjct: 61 QRGVDALERLAAL-APVVVVRGNHDSAALLALFSRMLGARSRIHFASHPRRPKQGGVLDF 119 Query: 117 RRDGTPGAVLCPIPFLRPRDIITS-QAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQ 175 + +PF+ ++ + + + I D A+ + D Sbjct: 120 DSADGHRVRVAVLPFVHAGRVVRGFEDATSWTGVYAKRIRGIVDVLDGALAEDFRPERD- 178 Query: 176 PLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGME-H 234 ++ HL GA+ S++ R I++ A A + P Y A GHIH+ Q + Sbjct: 179 --VLLFAAHLHVDGATLSNSERAIHVSDDYASRADHLPRVSYAAFGHIHKPQALPSSGVT 236 Query: 235 VRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLE 294 Y GSP+ L F E G+ K + VT + G+ V ++ + + + G L E Sbjct: 237 GAYAGSPLQLDFGEVGEQKRMVAVTAAPGRPAEVVSIPLTRGRELRAFTGTLE------E 290 Query: 295 QWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLP----VEVLLVRRSREQRERVLA 350 + + T E + K + L VE R + +R LA Sbjct: 291 LAAAADGLGDALCKLTLRTAEPDPSLASKARELLPRAEIVQVVEHCAAREMQALDDRDLA 350 Query: 351 SQQRETLSELSVEEVFNRRLA-LEELDESQQQRLQHLFTTTLHTLAGEH 398 + E S+EE+F+ L + + R++ +FT L +A + Sbjct: 351 AGDAR---EPSLEELFDEYLQRSKGTRSAPAARVREVFTAALSAIAADE 396 >UniRef50_UPI00016C0A35 exonuclease sbcD n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0A35 Length = 382 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 84/402 (20%), Positives = 162/402 (40%), Gaps = 36/402 (8%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+I HTSDWH+G+ + S + + L +E ++ + D II++GD++D+ +P A Sbjct: 1 MKIFHTSDWHIGKVIGNISMIEDQRHILMQFIELSKQEKPDVIIISGDIYDSPTPSISAI 60 Query: 61 TLYNRFVVNL-QQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 TL N + L Q + ++ G+HD+ L +++ N + + + + Sbjct: 61 TLLNEILTVLVMQMKIFIFIVPGDHDNTIQLKL--ELLKQSNLYLATN--KLFERILFIK 116 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 GT +PF+ P I H + + Q+ K D Sbjct: 117 GTELYHFYLVPFIDPLLIQ---------HTNTHSKISTPEQAMQYIISEIKKTIDSTSNN 167 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCG 239 I H + + S A + + +DA + F DY+ALGH+H+ +G E V Y G Sbjct: 168 ILITHNFVI--NYSKAKQFAAMPNIDAINYELFADFDYVALGHLHKRAFVGRKE-VCYSG 224 Query: 240 SPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDV 299 S SF E + K ++ +T SN + V N +P+ P D + T L+ + Sbjct: 225 SIAKYSFAEENQIKGINKITISN---KYVRNEYLPLLAPK-----DFQTFTDTLDNILQI 276 Query: 300 SQEPP--------VWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLAS 351 Q+ ++ + +E L +++ + P + + + + + + Sbjct: 277 GQDFYLKHGHYIQNYIHATLIDEEELLHPLDQLRTV---FPNIISIDKPLLKPAKTEPLT 333 Query: 352 QQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHT 393 E + + F + + EL E +Q ++ + + Sbjct: 334 NNLEIQTPSDLFLAFYIQCSKTELTEEKQICIKDIINNVIQG 375 >UniRef50_B2HL38 DNA repair exonuclease n=1 Tax=Mycobacterium marinum M RepID=B2HL38_MYCMM Length = 410 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 89/403 (22%), Positives = 153/403 (37%), Gaps = 17/403 (4%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR+LH SDWHLG+ Y SR +H+A L+ + A+ + I+ GD+FD P Sbjct: 1 MRLLHISDWHLGRMTYRYSRAPDHEAVLEETIGYARALRPHLILHTGDLFDAFRPGYAEM 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD- 119 + L +VV AGNHDS A ++ + P+ + Sbjct: 61 ARGIDALQELAAIAPVVVV-AGNHDSPALFRLFNQLLGEGSRIRFIDQARRPEEGGVLEF 119 Query: 120 ---GTPGAVLCPIPFLRPRDIITS-QAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQ 175 G L P+PF+ ++ + + + I D + + D Sbjct: 120 PGMGDEVIRLAPLPFVHANRMVERFEDSSTWMVTYADRIHLIEDALGRGLREGYDTSRD- 178 Query: 176 PLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGM-EH 234 ++ HL GA + R ++I + P Y A GHIHR Q + + Sbjct: 179 --VLLFAAHLYVSGARFCGSERPLHISDAYGCRLERLPQVSYAAFGHIHRPQALPTTVVN 236 Query: 235 VRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLE 294 RY GSPI L F E G+ K + +V G+ +V ++ +P+ L G I + Sbjct: 237 GRYAGSPICLDFGEEGEQKEIVIVEAEPGRPATVTTQSLSGGRPLRTLNGTFEEIRS--- 293 Query: 295 QWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQR 354 + + TD ++ + L V + R V+ + + Sbjct: 294 ---HAPTVGNALCRVTVRTDTPTENLSELLHELCPEATF-VDVNEDCAATRIEVVEATEA 349 Query: 355 ETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGE 397 + +E S+ ++F +A + + +R+ F L + E Sbjct: 350 QAEAEPSLRDLFRTYIAEQGTRGADAKRVLKRFEQLLDAVDEE 392 >UniRef50_Q3ZXH4 Nuclease SbcD n=5 Tax=Dehalococcoides RepID=Q3ZXH4_DEHSC Length = 415 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 83/409 (20%), Positives = 158/409 (38%), Gaps = 34/409 (8%) Query: 1 MRILHTSDWHLGQNFYSK--------SREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDT 52 M+ILH +D H+G Y + SR A+ D L+ A +VD ++ +GD + + Sbjct: 1 MKILHFADLHIGVENYGRFDSATGLSSRLADFLTAFDRLVAYAIDKKVDLVVFSGDAYKS 60 Query: 53 GSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESR--DIMAFLNTTVVASAGH 110 P + + R V L +G + +L GNHD + +I L+ V +G Sbjct: 61 RDPSQTQQREFARRVSTLASSGIQVFLLVGNHDQPNAAGRATTTEIFDTLDIANVHVSGK 120 Query: 111 APQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACK 170 A L P + +P+LR +++ L + Y + Sbjct: 121 AEVHLINTRNGP-IQIASLPWLRRSSVLSVSNQKEEKNLSIEELNQRVESYLAGIIENLA 179 Query: 171 LRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNF--PPADYIALGHIHRAQI 228 + D+ +P I + HL+ +K + R+I IG N P DY+ALGHIH+ Q+ Sbjct: 180 GQLDKNIPSILSAHLSV-NTAKVGSERNISIGYEPTVMLSNIANPAFDYVALGHIHKQQV 238 Query: 229 IGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLA- 287 + V Y GS L F E K +LV ++ + ++ +L Sbjct: 239 LSSAPPVIYPGSLERLDFGEEKDDKGFYLVEIDPLSHKTDFEFIKLEGRRFLTIELNLNA 298 Query: 288 -------SITAQLEQWRDVSQEPPVWLDIEITTDE----YLHDIQRKIQALTESLPVEVL 336 + L+ + ++ V L +E+ + DI+ ++ + + Sbjct: 299 DSLDPTLEVINILQARQQDIKDAIVRLKLELPAEIGGQLRDSDIREALREA-HNFTISKN 357 Query: 337 LVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQH 385 ++R +R++ + + L + L +++ +++ L Sbjct: 358 VIRLTRQRADGF-------KVEGLDPIQALEHYLEIKQTSAQEKKTLLE 399 >UniRef50_UPI00016C3AE3 ATP-dependent dsDNA exonuclease n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3AE3 Length = 411 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 102/422 (24%), Positives = 165/422 (39%), Gaps = 39/422 (9%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVF-DTGSPPS-- 57 MRILHT+DWHLG R + + ++ + + VD ++VAGD+F + P Sbjct: 1 MRILHTADWHLGDRLGRIDRTDDLRRAVERVAAHCKEQNVDVLLVAGDLFSELARPDGLR 60 Query: 58 YARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTV----------VAS 107 + +TG ++ L GNHD+ M+ + T+ Sbjct: 61 ETIRHWQEVFREFLETGGTILTLTGNHDNENFCQTLVSAMSLASPTIGRPGEVVPPGRLY 120 Query: 108 AGHAPQILPRRDGTPG--AVLCPIPFLRPRDIITSQAGL---NGIEKQQHLLAAITDYYQ 162 P L D T G +PF P A L + EK L++A D + Sbjct: 121 LAAEPTFLRLEDRTDGFPVQFVLMPFPTPHRFFRGDAALKYGSPEEKNALLVSAWADALR 180 Query: 163 QHYADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFP-PADYIALG 221 + A + D P + + H+ G++ ++ I I + P DY+ALG Sbjct: 181 EIRAH---PKYDPTAPAVLSAHVHIHGSTVGPSLFRITIEEDVVVEGADLPQQFDYVALG 237 Query: 222 HIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSN-GKLESVENLNVPVTQPMA 280 HIH+ Q++ G H+RYCGS + E G K V LV G+ E L++P T Sbjct: 238 HIHKPQVV-GAPHMRYCGSIERMDLGEQGDQKGVVLVDIGRTGRNGEPEVLSLPSTPIYE 296 Query: 281 VLKGDLASITAQLEQWRDVSQEPPVWLDIEITT-DEYLHDIQRKIQALTESLPVEVLLVR 339 V+ D A +L + +Q V L I T+ + L D+ R + + Sbjct: 297 VVVLDPAQDIPRLREEFPDAQNDLVNLQIRYTSGKDQLEDVLRDLDRIFPRW-------- 348 Query: 340 RSREQRERVLASQQRETLSELSVEEVF---NRRLALEEL---DESQQQRLQHLFTTTLHT 393 +R+ +E +E + + F R +EL DE ++ + + L Sbjct: 349 YARDWQETGALGPTLVNPAEGAGGKGFGETVREYLGQELVQHDEGERDAILKIAEGLLKE 408 Query: 394 LA 395 L Sbjct: 409 LE 410 >UniRef50_B3QT16 Nuclease SbcCD, D subunit n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QT16_CHLT3 Length = 410 Score = 201 bits (510), Expect = 5e-50, Method: Composition-based stats. Identities = 85/390 (21%), Positives = 156/390 (40%), Gaps = 20/390 (5%) Query: 1 MRILHTSDWHLGQNFYSK--------SREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDT 52 M+ILHT+D H+G + K +R + Q D+L++TA ++DA++ GD + Sbjct: 1 MKILHTADIHIGYTTHGKLDQQAGLNTRLLDFQKSFDFLVQTALDEKIDALLFCGDAYRD 60 Query: 53 GSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDI--MAFLNTTVVASAGH 110 +P + ++ R + + + +V++ GNHD + + L VV Sbjct: 61 ATPSPTEQQIFARCLKPILEANIPVVMVVGNHDHPFAHGRANALQIFQELAAQVVVIDKL 120 Query: 111 APQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACK 170 Q++ + G V P P + A + E + + ++ + ADA + Sbjct: 121 EVQLVETKSGLLRIVGLPWPVRTNLFAKEAYAAFSPEELKSKIHEFYLEFILEQ-ADALR 179 Query: 171 LRGDQPLPIIATGHLTTVGASKSDAVR--DIYIGTLDAFPAQNFPPADYIALGHIHRAQI 228 + D+ +P I GHL A S + R + + + A DYIALGHIH+ Q Sbjct: 180 EQPDE-IPSILAGHLHIDTAMMSKSERITLLAKDPMFSVGALAHKEFDYIALGHIHKFQD 238 Query: 229 I--GGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAV--LKG 284 + G V Y GS +SF+EC + K +VT + K S + P +P + Sbjct: 239 LNPGNQPPVVYSGSIERISFNECDEEKGFVMVTIDDAKRVSYARVLTPA-RPFVSFDIDV 297 Query: 285 DLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQR-KIQALTESLPVEVLLVRRSRE 343 L S +++++ + + + I + E+L L+ S E Sbjct: 298 TLKSPEPMAFILAEIAKKNIADAIVRVRILCSIDQKSEIDISTIKEALQEAFLVSEVSVE 357 Query: 344 QRERVLASQQRETLSELSVEEVFNRRLALE 373 E+ + + ++ E + Sbjct: 358 VNEKPKRLRNPDLSKTMTAAEALEIYVEQN 387 >UniRef50_C0Z548 Putative exonuclease sbcCD subunit D n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z548_BREBN Length = 334 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 82/336 (24%), Positives = 146/336 (43%), Gaps = 33/336 (9%) Query: 79 VLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQI--------LPRRDGTP-------- 122 ++AGNHD + + + ++ AP + + G P Sbjct: 1 MIAGNHDQPERVRAAAPLATKHGIVLLGLPKEAPLLTQEASADRVQIVQGGPSWLEMKIP 60 Query: 123 ----GAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLP 178 A++ +P+ + + L+ Q+ + A ++ Q AD + + Sbjct: 61 GCAANAIILALPYPSESRL---KELLSESFTQEQMQLAFSERIAQLLADLSVHFREDTVN 117 Query: 179 IIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFP-PADYIALGHIHRAQIIGGMEHVRY 237 ++ T HL +G ++D+ R I IG Q FP ADY+ALGH+HR Q + VRY Sbjct: 118 LV-TSHLFVMGGKETDSERPIQIGGALTVSPQAFPKNADYVALGHLHRLQKLSDKPLVRY 176 Query: 238 CGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWR 297 GSPI SF E G+SK V LV G+ E + + +P+A + Q+E+W Sbjct: 177 SGSPISYSFSEAGQSKAVVLVEVEPGQEVREEIIYLTSARPLARWRAT--EGIEQVERWL 234 Query: 298 DVSQEPPVWLDIEITTDEYLHDIQ-RKIQALTESLPVEVLLVRRSREQRERVLASQQRET 356 + ++ W+D+E+ + + ++++ L++ L ++R + ER +QR Sbjct: 235 EEGRDAGAWIDLELHVSGVIDPAEFQRVRKLSDDF----LKIQRVVVREEREEEEEQRVE 290 Query: 357 LSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLH 392 L+ELS +++F R ++L LF L Sbjct: 291 LTELSSDQLFKRFYERRR-GAEPDEQLVALFQRLLA 325 >UniRef50_D1C2F9 Nuclease SbcCD, D subunit n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C2F9_SPHTD Length = 413 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 93/409 (22%), Positives = 156/409 (38%), Gaps = 31/409 (7%) Query: 1 MRILHTSDWHLGQNFYS--------KSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDT 52 MR+LH +D HLG Y SR ++ A D +++ A H+VDA++ AGD F Sbjct: 1 MRLLHFADLHLGMENYGTLDTRLGYSSRVRDYLAAFDQVVDHAIEHRVDAVLFAGDAFKH 60 Query: 53 GSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHD--SVATLNESRDIMAFLNTTVVASAGH 110 P + + + + L V+L GNHD S+ DI A L+ + A + Sbjct: 61 RDPSPTIQREFAKRIRRLAAAEIPTVLLVGNHDLPSIDARATPMDIYATLDIPFIYVARN 120 Query: 111 APQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACK 170 + G P V+ +P+L + ++ + N ++ A Sbjct: 121 PDVLRIETRGGPLQVV-TLPWLSRQRLLDPEQRRN---PDPGAVSRAAAEATSAILSALV 176 Query: 171 LRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNF--PPADYIALGHIHRAQI 228 + D P + HL+ GA + + I +G DY+ALGHIH+ Q Sbjct: 177 DQLDPDTPAVLLAHLSIEGARL-GSEQSIMLGEDLVLDTDELRVRAFDYVALGHIHQHQQ 235 Query: 229 IGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNG--KLESVENLNVPVT-QPMAVLKG- 284 I Y GS + F E + K LV G VE PV +P L+ Sbjct: 236 ITARPPTVYAGSLERIDFGEEREEKGFVLVDIQPGPAGERRVEWTFQPVRSRPFVTLRIK 295 Query: 285 -----DLASITAQLEQWRDVSQEP--PVWLDIEITTDEYLHDIQRKIQALTESLPVEVLL 337 + + ++E+ ++ + +E L + + L + Sbjct: 296 TLHEDPMVDVEREIERRTADLDGAIVRAFIAVPPEREELLRIDEVRRMLLQRGAAYVAKV 355 Query: 338 VRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHL 386 VR Q + + ETL ++ E + L+L +L E Q++R+ Sbjct: 356 VRDVDLQVRPRIELRDHETLDPVAALE---KWLSLRDLTEDQRRRILEA 401 >UniRef50_A7NIU3 Nuclease SbcCD, D subunit n=6 Tax=Chloroflexi (class) RepID=A7NIU3_ROSCS Length = 418 Score = 190 bits (482), Expect = 9e-47, Method: Composition-based stats. Identities = 86/402 (21%), Positives = 156/402 (38%), Gaps = 31/402 (7%) Query: 1 MRILHTSDWHLGQNFYSK--------SREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDT 52 MR+LH +D H+G Y + SR ++ LD ++ VDA+++AGDV+ Sbjct: 1 MRLLHLADLHIGIENYGRVDPSTGLHSRLRDYLERLDEAIDVGLAEGVDAVLIAGDVYKN 60 Query: 53 GSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVA-SAGHA 111 +P + + R + L+ G + +L GNHD + + F V + Sbjct: 61 RTPNPTQQREFARRIHRLRACGLPVFILIGNHDVSPAAGRAHAVEIFDTLAVDGVTIADR 120 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGL--NGIEKQQHLLAAITDYYQQHYADAC 169 P+I + + + +P++ ++T + + +E + L+ + + +Q D Sbjct: 121 PRIHTLQTRSGPLQVIALPWVTRHALLTKEELRMASFLEIETMLIERVERFLRQAADDL- 179 Query: 170 KLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQ--NFPPADYIALGHIHRAQ 227 D LP + T H T GA+ A R + +G +P P DY+A+GHIHR Q Sbjct: 180 ----DPALPAVLTVHGTIDGATF-GAERQVLLGRDLIYPRSLMALPNVDYVAMGHIHRHQ 234 Query: 228 IIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLA 287 +G V Y GS + F E + K +V + +P + D+ Sbjct: 235 ALGDHPPVVYPGSIERIDFGEEDEDKGCVIVDLKAKGEAHWRFHKL-AARPFVTIAVDVR 293 Query: 288 SITAQLEQWRDVSQEPP---VWLDIEI-----TTDEYLHDIQRKIQALTESLPVEVLLVR 339 SI +++ + + ++I D + R+ + + + V Sbjct: 294 SINDPMQRVLAAIERRSLRGAVVRVKIDARPEQADALQTEAIRRALDDAGAYVIAAVTVE 353 Query: 340 RSREQRERVLASQQRETLSELSVEEVFNRRLALE--ELDESQ 379 R R R L + L L+ L + L E + Sbjct: 354 VERSTRGR-LGNSDASILDGLTPRRALELYLRQKTPPLSEER 394 >UniRef50_Q2S4Q6 Nuclease SbcCD, D subunit subfamily, putative n=2 Tax=Rhodothermaceae RepID=Q2S4Q6_SALRD Length = 453 Score = 190 bits (482), Expect = 9e-47, Method: Composition-based stats. Identities = 83/391 (21%), Positives = 142/391 (36%), Gaps = 34/391 (8%) Query: 3 ILHTSDWHLGQNFYSK--------SREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGS 54 +LHT+D HLG + + +R + + L+ +++ A VDA + GD + T Sbjct: 25 LLHTADIHLGFKTHGRRDPDTGLNTRLLDVRRSLEAVVQRALDADVDAFLFCGDAYHTAD 84 Query: 55 PPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLN----TTVVASAGH 110 P + ++ + + L +V++ GNHD T + + F + Sbjct: 85 PTPTQQDIFVQCLRPLADADIPVVLIVGNHDHPVTFGRASSLDIFDHIAGAVHCYRKPAS 144 Query: 111 APQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACK 170 + Q+L + G + P P ++ E +Q + Y Q+ A+ + Sbjct: 145 SVQVLDTKSGPLQLIPLPWPIRSQILAKDEYRRMSPDELRQFVEEHYVTYVQRRAAEIME 204 Query: 171 LRGD-----------QPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFP--PADY 217 +P + GH+T GA+ S + I + F P DY Sbjct: 205 AETGITPEGTEHALSPDVPTVLAGHVTVQGAALSGSEHTTTIASEPKFTVGQLAVRPIDY 264 Query: 218 IALGHIHRAQIIG--GMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNV-P 274 +ALGH+HR Q G V Y GS ++F+E + K V LV + V Sbjct: 265 VALGHVHRPQNRNEEGHPPVVYSGSIERVTFNEADEDKGVQLVDIDPARDPVTHTTFVET 324 Query: 275 VTQPMAVLKGDLASITAQLEQWRDVSQEPPVW---LDIEITTDE---YLHDIQRKIQALT 328 +P + D E+ QE V + + E D +R +AL Sbjct: 325 PARPFVAVSVDARDADDPTERVLAAIQERDVADAIVRVRYRVREEQVAQVDPERLREALA 384 Query: 329 ESLPVEVLLVRRSREQRERVLASQQRETLSE 359 + V + R+R A + L E Sbjct: 385 AADTVAGIERTVDPADRKRRTAVTRESGLEE 415 >UniRef50_A4XJU8 Nuclease SbcCD, D subunit n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XJU8_CALS8 Length = 419 Score = 187 bits (475), Expect = 5e-46, Method: Composition-based stats. Identities = 84/378 (22%), Positives = 148/378 (39%), Gaps = 45/378 (11%) Query: 1 MRILHTSDWHLGQNFYSK-------SREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTG 53 +R +HT+D H G YSK SR + D +LE + + +D +++ GD+F Sbjct: 3 IRGVHTADLHFGVTTYSKETPDGLGSRVHDFFRTFDRILEYIRQNHIDLLLITGDIFKDR 62 Query: 54 SPPSYARTLYNRFVVNLQQTGCHLVVLAGNHD--SVATLNESRDIMAFLNTTVVASAGHA 111 P S R ++ + VV + + G +V++ GNHD + S + + Sbjct: 63 EPNSTLRNMFYKRVVEIAKEGILVVIVPGNHDMHPFEAKHHSVKVFEIFEQENIVVMDKL 122 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 + + +P+L I EK + + I +++++ A+ Sbjct: 123 FETKVFDIKGERLRVIAVPYLYLERFIDKTI----PEKIEQIEQNIANFFEERLAEILDS 178 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNF--PPADYIALGHIHRAQII 229 D +P I GH T A + R I +G P P ++ALGHIH+ QI+ Sbjct: 179 CED-DIPTILAGHFTVNEAEV-GSERMIMVGKDVKVPLSVLLHPKLRFVALGHIHKPQIL 236 Query: 230 GGMEH-VRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLAS 288 + + YCGSP + F E K + K V +P L+ DL Sbjct: 237 NSKDPAIVYCGSPDRIDFSEAQDQKGFVVFEIE--KENFWFEFKPVVVRPFYQLEIDLYE 294 Query: 289 ITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEV------LLVRRSR 342 +E+ + +I +KI++L E+ V L++R Sbjct: 295 ANGDVEKIL-------------------ISEIDKKIKSLEENSSANVKASVVKLIIRTQS 335 Query: 343 EQRERVLASQQRETLSEL 360 +ER+ ++ E L ++ Sbjct: 336 LLKERLNLTKVEEYLKDM 353 >UniRef50_C6P7X1 Nuclease SbcCD, D subunit n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6P7X1_CLOTS Length = 406 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 75/416 (18%), Positives = 155/416 (37%), Gaps = 35/416 (8%) Query: 1 MRILHTSDWHLGQNFYS--------KSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDT 52 + I HT+D H+G Y +R + D ++ + D +++GD++ + Sbjct: 2 INIAHTADIHIGIENYGTINKKTGLNTRLEDFLNAFDKFVDYSI-ENCDIAVISGDMYKS 60 Query: 53 GSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESR--DIMAFLNTTVVASAGH 110 P + + + L Q +V+ GNHD + +++R DI L+ V A Sbjct: 61 REPNPTQQRELAKRIKRLSQH-IPVVINNGNHDQPNSDSKARAFDIYKILDVDNVYVANK 119 Query: 111 APQILPRRDGTPGAVLCPIPFLRPRDIITSQA--GLNGIEKQQHLLAAITDYYQQHYADA 168 L + P + +P+ ++ + L+ + + ++ I D Sbjct: 120 PDVFLIKTKNGP-IQIACLPYFPKSFLLKLEESKNLSIDDINKKMVEKINTIL-----DI 173 Query: 169 CKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFP--PADYIALGHIHRA 226 + D +P I + HL+ GA S + + I IG P Y+ALGHIH+ Sbjct: 174 LTSKLDSSIPSILSAHLSVTGAVTS-SEKSIMIGDDVVVPISVIARHQYKYVALGHIHKY 232 Query: 227 QIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDL 286 Q++ Y GS + F E K V K+ + ++ + + Sbjct: 233 QVVWDTPLTVYSGSIEKIDFGEERDEKGFCHVIIDGEKV--LHKFISTNSREFKTINIQV 290 Query: 287 ASITAQLEQWRDVSQE---PPVWLDIEITTDEYL--HDIQRKIQALTESLPVEVLLVRRS 341 S + E+ D + + + + T + + H R+I + ++R Sbjct: 291 KSNISPTEEILDKLKRYDLSKSIVRLNLKTTKEIDKHIRYREINKYFIQNSYYFVGIKRD 350 Query: 342 REQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQH---LFTTTLHTL 394 + + L + E +L+ + ++ +LD + + L+ L+ + + Sbjct: 351 FDIDKGAL--RNPEINEQLNPLDALSKYFLSIDLDVDKNELLKRASLLYKELIEEV 404 >UniRef50_B8HPI4 Nuclease SbcCD, D subunit n=28 Tax=Cyanobacteria RepID=B8HPI4_CYAP4 Length = 442 Score = 186 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 84/414 (20%), Positives = 141/414 (34%), Gaps = 33/414 (7%) Query: 1 MRILHTSDWHLGQNFYS---------KSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFD 51 ++ILH SD HLG F +R + L ++ A VD ++ GD F Sbjct: 2 IKILHLSDVHLGSGFSQGRLNPVTGLNTRLEDFVTTLGRCIDRAIEEPVDLVLFGGDAFP 61 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVA-SAGH 110 +PP + + R L V+L GNHD + + + + G Sbjct: 62 DATPPPMVQEAFARQFRRLADASIPTVLLVGNHDQHSQGLGGASLCIYRTLGIPGFVVGD 121 Query: 111 APQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACK 170 + + +P+L ++T E + LA + + A A + Sbjct: 122 RLATHLIQTQHGPIQILTLPWLTRSTLLT------RPETEGLSLAQVNQLLIERLAIALE 175 Query: 171 ---LRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNF--PPADYIALGHIHR 225 R D LP + HL +++ A R + + P P DY+ALGH+H+ Sbjct: 176 GEIRRLDPQLPTVLLAHLMAD-SARYGAERFLAVSKGFTIPLSLLTRPCFDYVALGHVHK 234 Query: 226 AQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGD 285 Q++ V Y GS + F E G+ K LV G+ + + +PV + L D Sbjct: 235 HQVLSTDPPVVYPGSIERVDFGEEGEEKGYVLVEVERGR-ANFQFCPLPV-RQFRTLNVD 292 Query: 286 LASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQR 345 ++ + Q + I D +I+ + L V S Sbjct: 293 VSEHCDPQQALLAAIQAEDLNGAIVRLIYHLRSDQLNQIEMAA---LHQALQVAHSYTIH 349 Query: 346 ERVLASQQRETLSEL------SVEEVFNRRLALEELDESQQQRLQHLFTTTLHT 393 +++ R L EL E L+ E + + L Sbjct: 350 PELVSQLARPRLPELGLGVGIDPLEALQTYLSNRPDLEEIAKEMTWAAQHLLAG 403 >UniRef50_B9KXS7 Putative nuclease SbcCD, D subunit subfamily n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KXS7_THERP Length = 419 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 88/425 (20%), Positives = 156/425 (36%), Gaps = 42/425 (9%) Query: 1 MRILHTSDWHLGQNFYSK--------SREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDT 52 +R++H +D HLG + + SR + D +++ A + DA++ AGD F Sbjct: 2 LRLIHFADLHLGVETHGQFRPDLGHSSRIQDFLDAFDQIIDAAIEERFDAVLFAGDAFKH 61 Query: 53 GSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATL--NESRDIMAFLNTTVVASAGH 110 P + + + L G +V+L GNHD ++ + DI A L V A Sbjct: 62 AEPSPTLQRRFAERIQRLLAAGIPIVLLVGNHDRPRSVVRSTPIDIYAALRLPGVIVANR 121 Query: 111 APQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHY---AD 167 + P V+ +P++ PR ++ A + + Y++ Sbjct: 122 PERFTIATPSGPLQVV-ALPWIPPRLLLADDALREAGTPE------LERRYKEVIASALA 174 Query: 168 ACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNF----PPADYIALGHI 223 D P + GHL+ G + R + +G F P DY+ALGH+ Sbjct: 175 PLLAALDAATPAVFLGHLSMEGGRF-GSERSVILGNDPLFGLDELGLNSAPIDYVALGHL 233 Query: 224 HRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNG---KLESVENLNVPVTQPMA 280 H Q++ V Y GS + F E + K V + G + S E + T+PM Sbjct: 234 HSHQVLHERPPVVYAGSVERIDFGEEREDKGYVAVRIAAGPYPRDVSWEFRPL-RTRPMR 292 Query: 281 VLKGDLASITAQLEQWRDVSQE----PPVWLDIEITTDEYLHDIQRKIQ-----ALTESL 331 + D+ + T E R + + P + + ITT R ++ + + Sbjct: 293 TFRLDILTDTPMDEIRRALERHATLIPEAIVRVTITTTPERAAAIRPLEVRRWLSELGAA 352 Query: 332 PVEVLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTL 391 V + V+ R R RV + + R + L L + + + + Sbjct: 353 HVAGITVQTERVARPRVELERSSRH----DPVSLLERWVNLHRLSDQLAKAVIQRGREII 408 Query: 392 HTLAG 396 + Sbjct: 409 ERVES 413 >UniRef50_B9K7R6 Exonuclease n=6 Tax=Thermotogaceae RepID=B9K7R6_THENN Length = 383 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 87/410 (21%), Positives = 144/410 (35%), Gaps = 46/410 (11%) Query: 1 MRILHTSDWHLGQNFYS----KSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFD-TGSP 55 ++ILHT+DWH G +S + R AE LD ++E A+ VD +VAGD+ +P Sbjct: 7 LKILHTADWHFGLTSWSSSKPRDRRAEINEALDRVIEEARKEGVDLFLVAGDLLHNRSNP 66 Query: 56 PSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQIL 115 A ++ + Q +VVL GNHD + + V ++ Sbjct: 67 GVTAMKDVMEYLKKMLQI-APVVVLLGNHDWRGLTAFGDLLQVLSDDLVFLRYPEPVDVV 125 Query: 116 PRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQ 175 R + P P+ + +E + + ++ A + + Sbjct: 126 AGR--GQKVRILPFPYPEESE---------DLEAKISRGRDFRQWLEKKLAKLKEAGKED 174 Query: 176 PLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPA-DYIALGHIHRAQIIGGMEH 234 + GH T G G P DY+ALGH+H ++ Sbjct: 175 --FAVFVGHFTVEGLEPYAGAEQ---GREIVINRNLIPFFADYVALGHLHGFHVVQEQPL 229 Query: 235 VRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASI----- 289 + Y GSPI L F E K LV G PV + + L ++ Sbjct: 230 MIYSGSPIRLDFGEEKDEKGAVLVVVKKGSE--------PVFRKIDTNPLPLKTLFYRTL 281 Query: 290 -TAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERV 348 T+ + +D + P ++ I D L+ + + V+ V + E+ + Sbjct: 282 DTSARREIKDFCRTFPGYVRITYEED-PLNMAHELLGEIDN-----VVKVEKRIEKVFQS 335 Query: 349 LASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEH 398 RE +S+L E+F + D L LF L + G Sbjct: 336 GVDDVREEISKLDFFELFKEYVKTRVKDHEN---LIKLFEELLEEVKGNE 382 >UniRef50_B9MRD8 Nuclease SbcCD, D subunit n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MRD8_ANATD Length = 420 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 86/425 (20%), Positives = 163/425 (38%), Gaps = 39/425 (9%) Query: 1 MRILHTSDWHLGQNFYSK-------SREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTG 53 +R +HT+D H G YS+ SR + D +L+ + + +D +++ GD+F Sbjct: 3 IRGVHTADLHFGVTTYSRETPDGLGSRVHDFFKTFDRILQFIRDNSIDFLLITGDIFKDR 62 Query: 54 SPPSYARTLYNRFVVNLQQTGCHLVVLAGNHD--SVATLNESRDIMAFLNTTVVASAGHA 111 P S R ++ + +V++ + G ++++ GNHD T + S + + Sbjct: 63 EPNSTLRNMFYKRIVDISKEGVLVIIIPGNHDMHPFETKDHSVKVFEIFEQPNIVVMDKP 122 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 ++ + +P+L + +K + L +++++ + Sbjct: 123 FEVKEFEIRDEKLRIIAVPYLYLERFV----DETFPQKTEELDMIAANFFEKKLSQVLDS 178 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNF--PPADYIALGHIHRAQII 229 D +P I GH T V A + R I +G P P ++ALGHIH+ QI+ Sbjct: 179 SED-NIPTILAGHFTVVEAQI-GSERSIMLGKDIKVPLSCLLNPKLKFVALGHIHKPQIL 236 Query: 230 GGM-EHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLAS 288 V YCGSP + F E SK + E V V +P L+ D+ Sbjct: 237 HAANPTVLYCGSPDRIDFSEANDSKGFVVFELDKDSF-RFEFQPVKV-RPFCQLEIDVFE 294 Query: 289 ---------ITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVR 339 I ++E+ + ++ I+++ + + Q I+ + VE L Sbjct: 295 DQVENLTKKILDKIEEKIQMFEQSTS-SSIQVSVVKLIIKTQSLIKEKIDIGLVERFLRD 353 Query: 340 RSREQRERVLASQQRET------LSELS-VEEVFNRRLALEEL--DESQQQRLQHLFTTT 390 R + + + E S E F + L+ + D + ++ F Sbjct: 354 RCFVLAPIEIEVIDSKKDFRIAEVDEKSDPVEAFEKFLSASQKYRDVENKDKIVSEFKKL 413 Query: 391 LHTLA 395 LH + Sbjct: 414 LHEIQ 418 >UniRef50_Q110K3 Nuclease SbcCD, D subunit n=3 Tax=Cyanobacteria RepID=Q110K3_TRIEI Length = 427 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 84/408 (20%), Positives = 160/408 (39%), Gaps = 32/408 (7%) Query: 1 MRILHTSDWHLGQNF-YSK--------SREAEHQAFLDWLLETAQTHQVDAIIVAGDVFD 51 ++I+H SD H+G F + + +R + + L ++ A + VD ++ GD F Sbjct: 2 IKIIHLSDIHIGSGFSHGRINPETGLNTRLEDFISSLKLCIDKAISEPVDLVLFGGDAFP 61 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHD--SVATLNESRDIMAFLNTT-VVASA 108 +P Y + + + L +V+L GNHD S S I L VV Sbjct: 62 DATPAPYIKQAFAGEIRRLVDAQIPIVLLVGNHDQHSQGQGGASLGIYRTLGIPGVVVGD 121 Query: 109 GHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADA 168 + ++G + P + G + + + L+ + + ++ Sbjct: 122 RLETHKIQTQNGYIQIITLPWLTASSLMTKSETEGKSMGQVNESLIQKL-----RLILES 176 Query: 169 CKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNF--PPADYIALGHIHRA 226 + + +P + GHL AS A R + +G P P DY+ALGH+H+ Sbjct: 177 EIRKLNPEIPTVLLGHLMADRASL-GAERFLAVGKGFNIPVSLLNHPYFDYVALGHVHKH 235 Query: 227 QII--GGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKG 284 Q + + Y GS + F E + K LV GK + +PV + +K Sbjct: 236 QNLNNSNNPPIIYPGSIERVDFSEEKEEKGFVLVELEKGKAI-WKFCALPV-RNFQTIKV 293 Query: 285 DLASITA-QLEQWRDVSQEPPVWLDIEI---TTDEYLHDIQRKI--QALTESLPVEVLLV 338 +++ + Q E + +S+ + + + E L I I QAL+E+ + Sbjct: 294 NVSEVENPQTELLKTISKYQIKNVVVRLIYQLRSEQLDLIDNSILHQALSEAHTYTIQPE 353 Query: 339 RRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHL 386 S+ R R+ ++ L + + + E++ + Q++ L+ Sbjct: 354 LVSQLARPRLPELSTGNSIDPLQALKTYLE--SREDIQDIQEEMLEAA 399 >UniRef50_C6JB59 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JB59_9FIRM Length = 1275 Score = 171 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 70/310 (22%), Positives = 124/310 (40%), Gaps = 31/310 (10%) Query: 1 MRILHTSDWHLGQNFYS------KSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDT-- 52 M+ILHT+DWH+GQ F R + L+++++ A+ + D + V+GDVF Sbjct: 1 MKILHTADWHIGQ-FKGPVVDGVNLRSQDTVNCLNYMIKVAEEEKPDIVCVSGDVFHQEQ 59 Query: 53 --GSPPSYARTLYNRFVVNLQQTGCHLVVLAG--NHDSVATLNESRDIMAFL-NTTVVAS 107 S + + L ++V+ G NHD + A N +V S Sbjct: 60 IGPVRYSDEMIVATDTITKLAGVAKAVIVMRGTPNHDGGGQFRVLSKMFANTGNVHIVTS 119 Query: 108 AGHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYAD 167 P +L TP A + IP ++ + GL+ E+ + + I+ Sbjct: 120 ----PTVLR----TPYADIACIPGFDKQEFRSRFPGLSADEENEAWTSYISSMV------ 165 Query: 168 ACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIA--LGHIHR 225 LR + I H T G + + P + A Y A LGHIHR Sbjct: 166 -MGLRAECHNTSILMAHYTVPGCNMESGQTSFFTNFEPVIPREALEAAGYEAVLLGHIHR 224 Query: 226 AQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGD 285 QI+ G+ +V Y G+ ++F++ G+ + + FS+ + + + + + D Sbjct: 225 PQILNGLHNVFYSGAINAMNFNDEGQERGFWIHEFSDTGKLTKGHNCITPYRRFYTITWD 284 Query: 286 LASITAQLEQ 295 + A + + Sbjct: 285 TEEVEAYIRE 294 >UniRef50_UPI0001C419A3 DNA double-strand break repair protein Mre11 n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C419A3 Length = 463 Score = 171 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 72/407 (17%), Positives = 137/407 (33%), Gaps = 49/407 (12%) Query: 1 MRILHTSDWHLG-QNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYA 59 MR H SD HLG + F RE + + ++ VD +I +GD+FD+ P + A Sbjct: 1 MRFAHISDSHLGCRQFGLLEREKDFYEVFNRTIDKIIEEDVDFVIHSGDLFDSNRPSTEA 60 Query: 60 RTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 + + ++ L + + +AGNHDS+ + F + + + P Sbjct: 61 LLTFQQALLRLNEAKIPVYAIAGNHDSILRKGSLPPQVLFKDIGLNIISPEHPV-----H 115 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 ++C +PF N + K D + Sbjct: 116 QLGAVLICGVPFATSSQKNALVENYNILSK----------------------VADTAVKS 153 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFP-PADYIALGHIHRAQIIG-GMEHVRY 237 I H D+ + P DY A+GH+H + G + Y Sbjct: 154 ILVSHQGISKWMPEDS---------YEIDLDDLPKNFDYYAMGHLHNFYVEDYGKGKLVY 204 Query: 238 CG-------SPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASIT 290 G S + +F E G K +V S + +VE + + + + + + Sbjct: 205 PGSMEINRTSELNDNFKEFG--KGFCIVDLSED-IPTVERVTIDLARKFYNEIIEYDKLD 261 Query: 291 AQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLA 350 +L + + V ++IT + + + E + +VL R + + ++ Sbjct: 262 ERLSVIEEELKTLEVKPIVDITVRGGDFESADVYEKINEKIGNDVLSFRPTFKPDNVLIG 321 Query: 351 SQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGE 397 Q + L + + + + + E + L T GE Sbjct: 322 ENQLDGDKTLDPKTLLKQTVDKKFAREEVTKLSVDLLDTLSEKRMGE 368 >UniRef50_Q2NFC6 DNA double-strand break repair protein Mre11 n=1 Tax=Methanosphaera stadtmanae DSM 3091 RepID=Q2NFC6_METST Length = 393 Score = 166 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 70/405 (17%), Positives = 142/405 (35%), Gaps = 61/405 (15%) Query: 1 MRILHTSDWHLGQNFYS-KSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYA 59 ++I H +D HLG Y RE + + +++ + VD ++ AGD+F+ PP A Sbjct: 3 IKIAHMADTHLGYKQYGLNERENDFYKTFEKIIDDIISKDVDYVLHAGDLFEHPKPPIKA 62 Query: 60 RTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNE--SRDIMAFLNTTVVASAGHAPQILPR 117 + + L + + V+AGNHDS+ N +++ N ++ + Sbjct: 63 LLVAQKGFEKLLENNIPIFVIAGNHDSIQRKNTSIPQELYKNENFHIINHKNYNFT---- 118 Query: 118 RDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPL 177 + L G+E + + + +A K R Sbjct: 119 --------------------LDEDIFLVGLEYFNRSYEGVEPFLKNTLDEAKKHR----- 153 Query: 178 PIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRA---QIIGGMEH 234 + H + + ++ DY A+GH+H + GG+ Sbjct: 154 IKLLMLHGSVSKYFDFEPEFELKTIP---------EGYDYYAMGHLHGRINDKFKGGI-- 202 Query: 235 VRYCGSPIPLSFDE----CGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASIT 290 + Y GS + E K +LVT + VE +N+P+ + + + + Sbjct: 203 LSYPGSTEIRTKSEIPNYQKNGKGYNLVTIGDDNKIDVEFINIPLERKFIIKSIEYPKLD 262 Query: 291 AQLEQW------RDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQ 344 L + D S++P V+ +T + Q + + L +VL +R E Sbjct: 263 ETLNKLSEKLESMDSSKKPVVY----LTIKNGNFERSEVAQQIYDKLEEKVLTLRIKYEP 318 Query: 345 RERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTT 389 + + + ++ E + ++ + +E L+ Sbjct: 319 TQVIENLPETIDKENITPENIIKEKIED-QFNEDVASLAVELYKN 362 >UniRef50_UPI000038E4E2 DNA repair protein n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E4E2 Length = 373 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 72/400 (18%), Positives = 149/400 (37%), Gaps = 59/400 (14%) Query: 2 RILHTSDWHLGQNFYSKS-REAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 R LH SD HLG Y RE + + ++ VD + GD+FDT SP + A Sbjct: 3 RFLHLSDTHLGYRQYMMDLREEDFYESFNEAIDFGLEENVDFFVHTGDLFDTWSPSNRAM 62 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNE-SRDIMAFLNTTVVASAGHAPQILPRRD 119 + + ++ L + + ++ G+HD +E + I FL ++ + ++ Sbjct: 63 NEFKKAMIKLYKKNKTMYLIMGDHDRPKRTDEVASRIFDFLGVKLLGTEELQSIVI---- 118 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 + +++ + + G+ K ++ D Y++ +A + Sbjct: 119 ----------NYGGEDILLSGISNMKGLRKN-----SLVDQYRKADIEAKSYK-----NS 158 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFP-PADYIALGHIHRAQIIGGMEHV-RY 237 I H I +++ P Y+A GH+H + +I V Y Sbjct: 159 IMMSHQGVS---------PYLIPEACEVDSKDLPVNYKYLAFGHVHDSYLITDKYPVFSY 209 Query: 238 CGSPIPLSFDEC----GKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQL 293 GS S +E K V+LV NGK+ + + + T+ + + + AS + Sbjct: 210 AGSTDLNSTNEIKNFLRNGKSVNLVDIENGKI-DAQRVKLKSTRYLNAVNTNYASYMDDM 268 Query: 294 EQWRDVS--QEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLAS 351 ++ + + I D D++ + L ++ R + V + Sbjct: 269 QKILKTPGINGKEPLISLTIHGDADRDDVKANLLLLKN-------VIIRGPVFEKEVKSI 321 Query: 352 QQRETLSELSVEEVFNRRLALEELDESQQQRL-QHLFTTT 390 +++ +S+L ++ F + Q L +++F + Sbjct: 322 EEKPNMSKL--QDYFKAY-----FKDDQMASLAENIFNSI 354 >UniRef50_Q6L2H7 DNA repair protein n=1 Tax=Picrophilus torridus RepID=Q6L2H7_PICTO Length = 370 Score = 165 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 69/363 (19%), Positives = 139/363 (38%), Gaps = 50/363 (13%) Query: 1 MRILHTSDWHLG-QNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYA 59 +R +H SD HLG + + RE + + ++ VD + +GD+FDT P + A Sbjct: 2 VRFIHFSDTHLGYKQYMMDERENDFYEAFNEAIDIGINEHVDFFVHSGDLFDTWLPSNRA 61 Query: 60 RTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNE-SRDIMAFLNTTVVASAGHAPQILPRR 118 + + ++ L + + ++ G+HD +E + I FL ++ + R+ Sbjct: 62 MNEFKKAMLKLYERNIDMYLIMGDHDRPKRRDEVASRIFDFLGVHLLGYDDLD---VVRK 118 Query: 119 DGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLP 178 ++ I ++ I + + Y++ + + Sbjct: 119 KFDEEIIISGISNMKGLRIPQ-----------------LLELYKK-----ADVIAESEKN 156 Query: 179 IIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFP-PADYIALGHIHRAQIIGGMEHV-R 236 + H + V +I + + P Y+A GHIH +++I + V Sbjct: 157 SVLISH---------EGVSPYFIKEQSEVDSSDLPVNYTYLAFGHIHDSKLIDNKKPVFS 207 Query: 237 YCGSPIPLSFDECGK----SKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQ 292 Y GS +E K V+LV ++G SV + + T+ ++K D ++ Sbjct: 208 YAGSTEINDTNELNHFKKYGKSVNLVDINSGT-ASVSRIKLNSTRYQDLIKTDNINLIID 266 Query: 293 LEQWRDVS---QEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVL 349 L++ + + ++P + L I EY RK+ A+ L +S E + Sbjct: 267 LDKSLENATGIKKPLITLIINTEDKEY----SRKVLAMYNQKAEIRCLFNKSVNMPENPV 322 Query: 350 ASQ 352 S+ Sbjct: 323 KSE 325 >UniRef50_B9NII9 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa RepID=B9NII9_POPTR Length = 265 Score = 163 bits (413), Expect = 8e-39, Method: Composition-based stats. Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 1/124 (0%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 +R LHT+DWHLG+ F+++S + LD + + + DA+++AGDV+D PP A Sbjct: 142 LRFLHTADWHLGRLFHARSLIEDQSHVLDQFVALVRDLRPDAVLIAGDVYDRAVPPPEAV 201 Query: 61 TLYNRFVVNL-QQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L + + + G +V++AGNHDS L ++A V G + D Sbjct: 202 ALLDDVLARIVVDAGVPVVMIAGNHDSAQRLGFGARLLAARGLHVAGRTGPETSCVTLHD 261 Query: 120 GTPG 123 Sbjct: 262 AHGE 265 >UniRef50_A7BMU6 Exonuclease SbcD n=1 Tax=Beggiatoa sp. SS RepID=A7BMU6_9GAMM Length = 246 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 57/243 (23%), Positives = 101/243 (41%), Gaps = 6/243 (2%) Query: 62 LYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ--ILPRRD 119 + F L++ V++AGNHDS + I++ L + + A Q ++ Sbjct: 1 MAYHFFCQLRKANIPAVIIAGNHDSAFRIEGLSQILSHLGISALGRPKIAEQGGVIQLET 60 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 + +PF+ R ++ S E +Q + + + + ++ + I Sbjct: 61 AHGKLCVAAMPFISERRLLRSVDLWTKDEVEQR--QSYQQCLAMLFENLTRDFREEHVNI 118 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFP-PADYIALGHIHRAQIIGGMEHVRYC 238 I HLT A ++ + D Y + P Q P A YIALGHIH+ Q I + Y Sbjct: 119 I-MAHLTIADAKRAYSEVDYYTQAIYRLPLQTLPSKAHYIALGHIHKPQHIPYVVPTAYS 177 Query: 239 GSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRD 298 GS I L F E G+ K +L+T G VE + +P+ +++ + S+ Sbjct: 178 GSLIQLDFGEVGEEKGFNLITVEPGNPAQVEFKPLSCQKPLTLVRCEKQSVRKHFRSLSR 237 Query: 299 VSQ 301 ++ Sbjct: 238 SAR 240 >UniRef50_A8F497 Nuclease SbcCD, D subunit n=1 Tax=Thermotoga lettingae TMO RepID=A8F497_THELT Length = 367 Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats. Identities = 83/403 (20%), Positives = 147/403 (36%), Gaps = 51/403 (12%) Query: 1 MRILHTSDWHLGQNFYS----KSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGS-P 55 M+ILHTSDWHLG ++ R AE + L +L+ A+ VD II+ GDV P Sbjct: 1 MKILHTSDWHLGLESWTGSKTVDRLAETENALRFLVTAAKKESVDLIIITGDVVHNKISP 60 Query: 56 PSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQIL 115 A + + ++ GNHD + L + +I Sbjct: 61 KIEALNVLTNILAEFSSL-APTFLVLGNHD-----WRGIKALKNLPVKNLHIIDSRTEI- 113 Query: 116 PRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQ 175 + L +P+L + + G DY + D + D+ Sbjct: 114 ----SSGEFKLFFLPYLDFQKTLDESNDFAG------------DYLSSVFTD-IRNNIDR 156 Query: 176 PLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFP-PADYIALGHIHRAQIIGGMEH 234 + H+ G +S+ + + A P DY+ALGHIH I+ Sbjct: 157 EKINLLAAHIMIEGLIESERENSMEV----QIKASMIPTGLDYVALGHIHALSIVEQSPL 212 Query: 235 VRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLE 294 + Y GSPI + F E K +V FS G+ + ++ P Q K D + LE Sbjct: 213 MCYAGSPIAMDFGEEKDRKGAIIVDFS-GERTKIRIVDTPRKQLKTFRKTDYSE--QSLE 269 Query: 295 QWRDVSQEPPVWLDIEITTDEYLHDIQRKIQA-LTESLP-VEVLLVRRSREQRERVLASQ 352 + + ++ + + +++ L E+ V+ + R E+ +Q Sbjct: 270 SLSNELKSFEGYVRVI-----FNAPPSNEVRKYLMENFECVKKVEFRNEHEKGGYQNLNQ 324 Query: 353 QRETLSELSVEEVFNRRLALEELDESQQ--QRLQHLFTTTLHT 393 Q + + +++ + + + Q + ++ LF T Sbjct: 325 Q-----KFDIIQLYQAYIKGKYGNLEQPMVKLVEKLFREVEQT 362 >UniRef50_C0QDX0 DNA repair exonuclease family protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QDX0_DESAH Length = 419 Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats. Identities = 83/393 (21%), Positives = 154/393 (39%), Gaps = 58/393 (14%) Query: 1 MRILHTSDWHLGQNFYSKSREAE---------HQAFLDWLLETAQTHQVDAIIVAGDVFD 51 ++ +HT+D HL + + D L++ A +VD I++AGD++D Sbjct: 2 VKFIHTADIHLDSPLKGLEVHDDAPVEEIRGATRRAFDNLIDLALEEEVDFILIAGDLYD 61 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA 111 ++ + L ++G + +++GNHD+ + L ++ + N T+ + Sbjct: 62 GDWKDYNTGLFFSARMGKLSKSGIKVFIVSGNHDAASQLTKTMPL--PDNVTLF--SPRK 117 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 PQ + D G ++ + A+T+ Y Sbjct: 118 PQSVKLDD--IGVIIHGQSYSH---------------------RAVTENLASQYP----- 149 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG 231 + D I H + G + D T+D ++ DY ALGH+H +II Sbjct: 150 QYDSNYFNIGLLHTSLTG---REGHEDYAPCTMDDLKSK---GYDYWALGHVHTREIISE 203 Query: 232 MEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITA 291 + + G+ E G +K LV+ +G++ VE + V + AV + DL+ Sbjct: 204 DPWIVFPGNIQGRHIKETG-AKGASLVSVEDGRIVKVEAFELDVLR-WAVCQVDLSEC-E 260 Query: 292 QLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRE--RVL 349 E+ DV ++ +E D+ LT S PV L+ ++ + E R + Sbjct: 261 TCEKIYDVVRQA-----LEQALDQVDGKPLAIRLILTGSCPVHGKLLDQTTQWTEGFRSI 315 Query: 350 ASQQRETLSELSVEEVFNRRLALEELDESQQQR 382 A Q E E +V+ R+++LEE+ Sbjct: 316 AVQSGEMWLE-TVKFQTTRKVSLEEMFGEDNPI 347 >UniRef50_C6IVB9 Metallophosphoesterase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IVB9_9BACL Length = 441 Score = 157 bits (396), Expect = 9e-37, Method: Composition-based stats. Identities = 84/433 (19%), Positives = 137/433 (31%), Gaps = 75/433 (17%) Query: 2 RILHTSDWHLGQNFYSKSREAEHQA---------FLDWLLETAQTHQVDAIIVAGDVFDT 52 R LH +D HL F S + + L+ A VD ++++GD++D Sbjct: 7 RFLHAADLHLDTPFSGMSGVPDRLRELLRESTFTAFERLIRLAIEEAVDFVVISGDIYDA 66 Query: 53 GSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHD--SVATLNESRDIMAFLNTTVVASAGH 110 A+ L + G + ++ GNHD S L + + T Sbjct: 67 SDSSLRAQLRLREGWDKLGEHGIPVYLIRGNHDPLSGRRL----RLALPDHVTEFGPKAE 122 Query: 111 APQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACK 170 + + R DG P AVL + P ++ A + Sbjct: 123 SVIAVRRSDGEPVAVLTGASYPTP-------------------------AVHENLAIQYR 157 Query: 171 LRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIG 230 L I H G DA + L A DY ALGHIH+ QI+ Sbjct: 158 REPGSALYHIGLLHGNVDGQEGHDAYAPCSLRDLQA------SGYDYWALGHIHKRQILC 211 Query: 231 GMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVP---------VTQPMAV 281 V Y G+ S E G K +LV + + + +A Sbjct: 212 DSPWVVYPGNIQGRSLKETG-PKGCYLVEVAENGEAELSFRRLDQVLWLESGLAIDGLAT 270 Query: 282 LKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRS 341 + S+ +L++ R+ + + + T LH + + E + +RR Sbjct: 271 EEALKVSVEERLDELREAEPDRITVVRLIFTGRGPLHGMLQSGPEAAE----LLQELRRK 326 Query: 342 REQRERVLASQQRETL--------------SELSVEEVFNRRL-ALEELDESQQQRLQHL 386 R + L E+ F L L E ++ +R++ L Sbjct: 327 ELGRFEAAGLGEGIVWPAGFKLETGMELDREGLLAEDSFLGELFRLGERTAAEPERVEEL 386 Query: 387 FTTTLHTLAGEHE 399 T L LA + Sbjct: 387 VGTALAPLADNRQ 399 >UniRef50_A5UJE8 DNA repair exonuclease (SbcD/Mre11-family), Rad32 n=3 Tax=Methanobrevibacter smithii RepID=A5UJE8_METS3 Length = 407 Score = 156 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 72/429 (16%), Positives = 143/429 (33%), Gaps = 76/429 (17%) Query: 1 MRILHTSDWHLG-QNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYA 59 M+ H +D HLG + F RE + D +++ +VD +I +GD+FD+ P A Sbjct: 1 MKFAHLADTHLGYRQFGLLEREKDFYEVFDKIIDKIIEEKVDFVIHSGDLFDSARPSPSA 60 Query: 60 RTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNE--SRDIMAFLNTTVVASAGHAPQILPR 117 + + ++ L+ G + +AGNHD V + + +++ + Sbjct: 61 LLAFQKGLLKLKGAGIPMYAIAGNHDIVNRNGAIPPQVLFKKFGLKLIS-------PINT 113 Query: 118 RDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPL 177 + +PF ++ L+ + K+ Q L+ + Sbjct: 114 NYMHDDVFIAGLPFYPASQNKNLKSKLDELSKKAENHEKSILVLHQGIDKYFNLQYE--- 170 Query: 178 PIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIG---GMEH 234 + IG DY ALGHIH I G Sbjct: 171 ---------------------LEIG-------DIPDNFDYYALGHIHNY--ICDDFGNGK 200 Query: 235 VRYCGSPIPLSFDE----CGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASIT 290 + Y GS + E K +V G +V+ + + + + V D ++ Sbjct: 201 LVYPGSTETWNVSELIDLKKNGKGFIVVDLD-GPKMNVKRVAMDIPREFIVKTIDYRNLG 259 Query: 291 AQLEQWRDVSQEPPVWLDIEI---TTDEYLHDIQRKIQALTESLPVEV------------ 335 A+++ ++ ++ + + D L +I I L + + Sbjct: 260 AEIDSIKNTIKDFDKRPILNLKINNIDSNLGEIYEFINRELGDLALMIRPTFNVLDREVD 319 Query: 336 --LLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEEL-----DESQQQRLQHLFT 388 ++ R + L + L E E+V N + L +L E + ++ F Sbjct: 320 VDAIINDENALRPKELLIDE---LKEYDSEDVNNLAVELYDLLSKNKTEESEDLIRQFFN 376 Query: 389 TTLHTLAGE 397 + + + Sbjct: 377 EKYNIIRDD 385 >UniRef50_D1VDQ0 Nuclease SbcCD, D subunit n=1 Tax=Frankia sp. EuI1c RepID=D1VDQ0_9ACTO Length = 479 Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 59/224 (26%), Positives = 86/224 (38%), Gaps = 5/224 (2%) Query: 162 QQHYADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALG 221 + A L + H GA+ SD+ RDI +G PA F Y ALG Sbjct: 243 RAMAAVRADLADHPGARSVVVAHAWVTGAAGSDSERDISVGGAAHVPAALFDGITYAALG 302 Query: 222 HIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAV 281 H+HR Q + G +RY GSP+ SF E +K LV L VE + VPV + M + Sbjct: 303 HLHRPQRVLGRADLRYSGSPLAYSFSETQDAKASLLVELGPAGLARVEPVPVPVHRRMTI 362 Query: 282 LKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRS 341 L+G L + +LE + + +T D D +++A V + Sbjct: 363 LRGPLEQLLTRLE----YGEHTEDLVAAVLTDDARPVDAMSRLRARFPHTLVLRHEPEHA 418 Query: 342 REQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQH 385 R + R +L V F DE ++ L Sbjct: 419 PADDGRTFTQRTRGR-DDLDVAADFVDFARGTPADEDERSLLAD 461 Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 1/137 (0%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M +LHTSDWHLG+ + A++D L++ + +VD ++VAGDV D PP A Sbjct: 1 MLVLHTSDWHLGRRLHGFDLATAQAAYVDHLVQVTRAERVDLVVVAGDVHDRAIPPVGAL 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 L++ + L+ TG +VV++GNHD+ A L + ++ + + D Sbjct: 61 RLFDEALSRLRDTGARVVVISGNHDAAARLGDKAGLLDP-RVAIRTDPARLASAVVVEDR 119 Query: 121 TPGAVLCPIPFLRPRDI 137 + P+P+L P + Sbjct: 120 FGPVRVYPVPYLEPAAV 136 >UniRef50_A2BM15 Predicted DNA repair exonuclease n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BM15_HYPBU Length = 407 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 88/424 (20%), Positives = 160/424 (37%), Gaps = 58/424 (13%) Query: 3 ILHTSDWHLGQNFYSK-SREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYART 61 +LH SD HLG Y RE + + +++ A VDA+I GD+FD+ PP+ A Sbjct: 13 LLHVSDTHLGYRQYGIIEREMDFYQVFEEVIDIAIREHVDAVIHTGDLFDSTRPPAQAIR 72 Query: 62 LYNRFVVNLQQTGCHLVVLAGNHDSVAT--LNESRDIMAFLNTTVVASAGHAPQILPRRD 119 R + L+ G +VLAG+HD+ L+ ++ + + G P + Sbjct: 73 AAIRALKKLRGHGIPFIVLAGDHDTPKRANLSPLTELDEVGLAYTIGAIGDKPTTIQIDT 132 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 ++ I G+ ++HLL A + + L Q L Sbjct: 133 RHGRLLVSGI------------RSQKGLHARKHLLDAFKQLVPRDRSTVNILLLHQALRE 180 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIH-RAQIIGGMEHVRYC 238 +A + +G + Y ALGHIH + G V Y Sbjct: 181 VAPNYEVELG--------------------ELPKGFSYYALGHIHLYREFRLGDAAVVYP 220 Query: 239 GSPIPLSFDECGK--SKYVHLVTFSNGKLESVENLNVPVTQPM---AVLKGDLASITAQL 293 GSP L DE + +YV LV +S+E + + + +P+ ++ LA + L Sbjct: 221 GSPEVLRIDEAREQPQRYVVLVEVDQRSTKSLERIRLEMPRPIVYKEIIYQGLAEFKSLL 280 Query: 294 EQWRDV--------SQEPPVWLDIEITTDEYLHDIQRKIQALTESL------PVEVLLVR 339 + R+ ++P +++ ++ DI ++ + S +E ++ Sbjct: 281 VELREKLAKMAAKGVKKPLLYMYVKRLPRGSKTDIYTLVERILGSYILDYKLNIETVIEN 340 Query: 340 RSREQRERVLASQQRETLSE-LSVEEVFNRRLALEEL--DESQQQRLQHLFTTTLHTLAG 396 + + L E L +E+ + L E+ ES++ L+ ++ Sbjct: 341 VPKTVQSAAATINIENILRELLGNDELAQLAVKLIEILGGESEKHALKEAYSIVAQEFGL 400 Query: 397 EHEA 400 + EA Sbjct: 401 DREA 404 >UniRef50_Q63EZ2 DNA repair exonuclease n=76 Tax=Bacillus RepID=Q63EZ2_BACCZ Length = 432 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 63/382 (16%), Positives = 121/382 (31%), Gaps = 61/382 (15%) Query: 1 MRILHTSDWHLGQNFYSKSREAEH----------QAFLDWLLETAQTHQVDAIIVAGDVF 50 ++ +H +D HL F + +++ A +VD +++AGD++ Sbjct: 23 VKFIHAADLHLDSPFKGMEMNVPQSVWERMKQSTFESFERIVDKAIQERVDFVLLAGDLY 82 Query: 51 DTGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGH 110 D + A+ + L Q + ++ GNHD + I N V Sbjct: 83 DAETRSLRAQVFVREQMKRLSQYDIPVFIIHGNHDHLG--GSWAAIEFPENVHVFTE--- 137 Query: 111 APQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACK 170 P++ + + L I +L A+TD Y Sbjct: 138 -------------------PYVEEKSFYKNGELLASIYGFSYLQQAVTDNMTAQYTKMSD 178 Query: 171 LRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIG 230 I H + G ++ + I L DY ALGHIH+ +I Sbjct: 179 APFH-----IGMLHGSVEGDAEHNRYSPFQIRELKE------KQFDYWALGHIHKREISS 227 Query: 231 GMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQP--------MAVL 282 ++ Y G+ E G K +L+ + + V + + Sbjct: 228 EAPYMIYPGNIQGRHRKETG-EKGAYLIELTKQGTQCSFFHTADVVWDEIEVSIDGLETV 286 Query: 283 KGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSR 342 + S+++ + + R +E L + T L R + + E + R Sbjct: 287 DDLMTSVSSAMNECR--REEEGTLLTVVFTGQGPLSPYLRDEKRVEEIFHILAAGEERKD 344 Query: 343 -----EQRERVLASQQRETLSE 359 + + ++ + E L E Sbjct: 345 FVYAMKWKNETVSFAEIERLKE 366 >UniRef50_B5IR16 Ser/Thr protein phosphatase family protein n=1 Tax=Thermococcus barophilus MP RepID=B5IR16_9EURY Length = 380 Score = 151 bits (380), Expect = 6e-35, Method: Composition-based stats. Identities = 83/387 (21%), Positives = 136/387 (35%), Gaps = 50/387 (12%) Query: 1 MRILHTSDWHLGQNFYS-KSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYA 59 MRI H SD HLG Y+ RE + + ++ +VD +I AGD FDT PP A Sbjct: 1 MRIAHISDTHLGYRQYNLDERENDIYDAFNEAIDIIIEERVDVVIHAGDFFDTPRPPIKA 60 Query: 60 RTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 + + L + G ++ + G HD+ Sbjct: 61 LYVAKEAIKRLHENGVKILTVLGEHDTPKRRAM--------------------------- 93 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 P L IP L ++ + G ++ D +Q + L ++ Sbjct: 94 --PPHKLLDIPILGIGEVNVVEVNGVGFFGISNMKGKRVDLLKQELSKVDAL-ANRYSKA 150 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRA-QIIGGMEHVRYC 238 + H + ++ +G DY A GHIHR G ++ Y Sbjct: 151 VLIAHQGIKKYLPFEGAYELELG-------DLPKEIDYYAFGHIHRRTFEKFGRGYLAYS 203 Query: 239 GSPIPLSFDEC----GKSKYVHLVTFSNGKLESVENLNVPVTQPMAVL---KGDL-ASIT 290 GS LS E K +++V G L V +++ +P L +GD+ + Sbjct: 204 GSIEILSRSEITDWKRDGKGIYIVDLE-GDLPEVHKISLQQIRPQFELSYSEGDVIEELK 262 Query: 291 AQLEQWRDVSQEPPVWLDIEITTDE-YLHDIQRKIQ-ALTESLPVEVLLVRRSREQRERV 348 A L + L I I+ + +I K+Q L + +P +VL + Sbjct: 263 AFLYNLLKNPLDKSPILRINISGEGIRKPEILEKVQYLLRKMVPEKVLRYDVHFVGSDAP 322 Query: 349 LASQQRETLSELSVEEVFNRRLALEEL 375 + E + +EE+F L E L Sbjct: 323 ITITAEELGKIVDLEELFIEYLGDETL 349 >UniRef50_A6Q875 DNA double-strand break repair protein n=3 Tax=Epsilonproteobacteria RepID=A6Q875_SULNB Length = 373 Score = 150 bits (379), Expect = 8e-35, Method: Composition-based stats. Identities = 83/397 (20%), Positives = 136/397 (34%), Gaps = 53/397 (13%) Query: 1 MRILHTSDWHLG-------QNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTG 53 M+I+H SD HLG REA+ + ++ + D I GD+F Sbjct: 1 MKIIHFSDTHLGFSDLDITNEEGINQREADFYKAFEDVINAIIDSRPDYAIHTGDLFHRA 60 Query: 54 SPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFL----NTTVVASAG 109 SP + A T + L++ LVV+AGNH S + S I+ L N V Sbjct: 61 SPSNRAITFALTQLKRLEKEDIPLVVIAGNH-STPRTSTSSPILEALETLDNVHAVFQQH 119 Query: 110 HAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADAC 169 + P + V +P + II + D Sbjct: 120 YEPVVFDD------IVFHALPHINDERIIEGEL------------------------DKI 149 Query: 170 KLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQII 229 + D I H + GA ++ F DY+ALGH H + Sbjct: 150 EAGIDSAKKNILMMHCSV-GAHYLMHEFGEWV--YPKAREDIFEKMDYVALGHWHGFGAV 206 Query: 230 GGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASI 289 G +V Y GS S + + K L+ FS G S + + + D Sbjct: 207 GKHPNVYYAGSTERTSSSDKREDKGYVLLDFSKGLEISHHTIPL---RRSLSFSIDAERY 263 Query: 290 TAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEV-LLVRRSREQRERV 348 + D+++ +++ + I +AL E + + V+R + E Sbjct: 264 EEETAAL-DLTEIEDALVEVRLFNLSVSSSIDITNKALNELFDKALHVKVKREFKAVEGE 322 Query: 349 LASQQRETLSELSVEEVFNRRLALEELDESQQQRLQH 385 E++ S+E F + DE++Q+RL Sbjct: 323 KLEGDIESV---SLEAYFISHIKKSVEDEAEQERLTA 356 >UniRef50_Q9HLR7 DNA double-strand break repair protein mre11 n=3 Tax=Thermoplasma RepID=MRE11_THEAC Length = 376 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 71/390 (18%), Positives = 137/390 (35%), Gaps = 64/390 (16%) Query: 4 LHTSDWHLG-QNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYARTL 62 +H SD H+G ++ RE + ++ A + VD +I GD+FDT P + A Sbjct: 1 MHFSDTHIGYRSLTLDEREQDFYDAFHEAIDIALENSVDFVIHTGDLFDTWVPGNRAIRE 60 Query: 63 YNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDGTP 122 + V+ L + V+ G+HD +G P Sbjct: 61 FRNAVMKLNARNIPIFVIFGDHDRPRR-----------------------------NGEP 91 Query: 123 GAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITD---YYQQHYADACKL---RGDQP 176 A + + + + + + L+ I++ Y + D K + Sbjct: 92 AAGIFDFMGVHVLGWDAYEYAVRKFDGEDVLIGGISNMKGYMKTRLKDEYKRSENIEEGY 151 Query: 177 LPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFP-PADYIALGHIHRAQIIGGMEHV 235 I H A+ ++ + P YIA+GH+H + Sbjct: 152 RNRILMSHQ---------AIDPFFVPDQCEAKMDDLPMNFSYIAMGHLHDFMERRIGPLI 202 Query: 236 RYCGSPIPLSFDECG----KSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGD----LA 287 Y GS S +E + K V++V SNG++ ++ + + +P ++ D + Sbjct: 203 SYAGSTEIKSENEINGYLKQGKGVNIVDISNGEV-DLQRIRLKSVRPQIRVESDADNYVH 261 Query: 288 SITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRER 347 I+ +L R E + +EI D + + + I + + R + +++ Sbjct: 262 EISEKLSSLRVKDNEKKPLVGLEIHGDISMETVMQDISK------FDNAIFSRPKIRKDP 315 Query: 348 VLASQQRETLSELSVEEVFNRRLALEELDE 377 + + ET + E F L E L + Sbjct: 316 KIPNIHTET---ADLREYFRAYLGDERLAD 342 >UniRef50_A2C9B6 DNA repair exonuclease n=6 Tax=Cyanobacteria RepID=A2C9B6_PROM3 Length = 404 Score = 147 bits (371), Expect = 7e-34, Method: Composition-based stats. Identities = 87/382 (22%), Positives = 142/382 (37%), Gaps = 56/382 (14%) Query: 2 RILHTSDWHLGQNFYSKS------REAEHQAF-LDWLLETAQTHQVDAIIVAGDVFDTGS 54 R LHT+DW +G+ F + + R + + + + A+ H VDA++VAGD+FD+ + Sbjct: 3 RFLHTADWQIGKPFRNITDPQKRFRLQQQRILSVSRIAAVAEEHNVDAVLVAGDLFDSST 62 Query: 55 PPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQI 114 PS + + + ++V+ GNHD + A + Sbjct: 63 VPS---AVVMEVLEVIGSMNRPVLVIPGNHDHGGAGGVWQRQDVQRQLKERAPLMQ-LLL 118 Query: 115 LPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGD 174 P A + P P LR RD + A I+ Q A+ C Sbjct: 119 KPEPVLIDHAFVLPCPLLRQRD-------------SEDPSAWISQLDWQDLAEDC----- 160 Query: 175 QPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFP-----PADYIALGHIHRAQII 229 P I H G +D +D G + + DY+ALG H + + Sbjct: 161 ---PRIVLAHGAVHGFESTDYNQD-SAGQSERINRIDLDMIQHGQVDYVALGDWHNLKQV 216 Query: 230 GGMEHVRYCGSPIPLSFD--ECGKSKYVHLVTFSNG-----KLESVENLNVPVTQPMAVL 282 G + YCG+P P FD + + V + G K S L+ + Sbjct: 217 G--DRAWYCGTPEPDRFDQGDQDQRGQVLVFDIDRGTCPIPKSVSTAGLHWHNLRVQLRT 274 Query: 283 KGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLV---- 338 DL + L+Q R S+ L +EI L + ++ AL E L ++L V Sbjct: 275 TSDLDRLERTLQQ-RIGSRVGRDLLRLEINGQLSLRE-YQRFDALIEVLRTQLLHVRIKG 332 Query: 339 ---RRSREQRERVLASQQRETL 357 RR ++ R + + + L Sbjct: 333 TCHRRPGQEELRAMTDRSEDHL 354 >UniRef50_D2MIU1 Ser/Thr protein phosphatase family protein n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MIU1_9BACT Length = 424 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 59/336 (17%), Positives = 116/336 (34%), Gaps = 69/336 (20%) Query: 1 MRILHTSDWHLGQNFYSKSREA---------EHQAFLDWLLETAQTHQVDAIIVAGDVFD 51 ++ +H +D HL + R + D L++ A +V+ +++AGD++D Sbjct: 5 VKFIHAADIHLDSALHGLERYEGAPVEEIRSATRRAFDNLVDLAIDEKVNFVLLAGDLYD 64 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA 111 + + L++ G + ++AGNHD+ + + + + +N + Sbjct: 65 GDWKDYNTGLYFVERMGRLREAGIRVFIVAGNHDAASQIAKHLRLPENVNLF----STRN 120 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 P+ + D Q A+TD Q Y Sbjct: 121 PEQVILDDLNVAVY-----------------------GQGFATRAVTDDLSQAYP----- 152 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG 231 +GD L I H G + I L + Y ALGH+H + + Sbjct: 153 QGDPQLFNIGMLHTCLDGKPGHEPYAPCTIDGLRS------KGYQYWALGHVHNREEVSR 206 Query: 232 MEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASIT- 290 + + G+ + E G K LVT +G + VE+ + + V++ L + Sbjct: 207 EPWIVFPGNIQGRNIREAG-PKGCTLVTVESGDIIEVEH------RDLDVMRWSLCELDV 259 Query: 291 --------------AQLEQWRDVSQEPPVWLDIEIT 312 +L+ D ++ PV + + + Sbjct: 260 SGSETVDDIYEQVREELQSALDSAEGRPVAVRLVLQ 295 >UniRef50_Q8U1N9 DNA double-strand break repair protein mre11 n=4 Tax=Thermococcaceae RepID=MRE11_PYRFU Length = 426 Score = 143 bits (361), Expect = 9e-33, Method: Composition-based stats. Identities = 64/388 (16%), Positives = 120/388 (30%), Gaps = 48/388 (12%) Query: 1 MRILHTSDWHLGQ-NFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYA 59 M+ H +D HLG F+ RE E LE A VD I++AGD+F + P Sbjct: 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGT 60 Query: 60 RTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLN-TTVVASAGHAPQILPRR 118 + ++ + + GNHD +++ V+ + Sbjct: 61 LKKAIALLQIPKEHSIPVFAIEGNHDRTQRGPSVLNLLEDFGLVYVIGMRKEKVENEYLT 120 Query: 119 DGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLP 178 G + + + + H + ++ + + + K Sbjct: 121 SERLGNGEYLVKGVYK-------------DLEIHGMKYMSSAWFEANKEILKRLFRPTDN 167 Query: 179 IIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIG-GMEHVRY 237 I H S++ IG D Y ALGHIH+ V Y Sbjct: 168 AILMLHQGVREVSEARGEDYFEIGLGD-----LPEGYLYYALGHIHKRYETSYSGSPVVY 222 Query: 238 CGSPIPLSFDE---------------CGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVL 282 GS F + G +K ++V + ++ + + Sbjct: 223 PGSLERWDFGDYEVRYEWDGIKFKERYGVNKGFYIVEDFKPRFVEIKVRPFIDVK----I 278 Query: 283 KGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSR 342 KG I +++ + + ++ + I + + + E L VE L + R Sbjct: 279 KGSEEEIRKAIKRLIPLIPK-NAYVRLNIGWRKPFD-----LTEIKELLNVEYLKIDTWR 332 Query: 343 EQRERVLASQQRETLSELSVEEVFNRRL 370 + S + S+ E F ++ Sbjct: 333 IKERTDEESGKIGLPSDFFTE--FELKI 358 >UniRef50_Q46GD4 Phosphoesterase n=2 Tax=Methanosarcina RepID=Q46GD4_METBF Length = 422 Score = 143 bits (361), Expect = 9e-33, Method: Composition-based stats. Identities = 66/342 (19%), Positives = 120/342 (35%), Gaps = 54/342 (15%) Query: 1 MRILHTSDWHLGQNFYSKS---------REAEHQAFLDWLLETAQTHQVDAIIVAGDVFD 51 M +H +D HL F S + +++ +VD +++AGDV+D Sbjct: 1 MSFVHAADLHLDSPFTGISEIDPELGERLAKATFQAYEAIIKLCMEEEVDFLLIAGDVYD 60 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA 111 + YA+ + + L+ G + + GNHD + S + N + S A Sbjct: 61 SADKSLYAQVRFIEGLRKLETAGIQVFICHGNHDPLD--GWSASLTWPENVH-IMSGDRA 117 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 + +++G AV+ + + T + ++ Sbjct: 118 EVVEFKKEGETAAVIVGMSYP-------------------------TRHIMKNLVKNFPR 152 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG 231 + D I H + + D + L DY ALGHIH I+ Sbjct: 153 KEDNWPFTIGLLHCSVGSNPEHDPYAPCTLQDLRKI------NYDYWALGHIHTPSIVCK 206 Query: 232 MEHVR-YCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQ-PMAVL------- 282 V Y G+P E G ++ +V S+G S + + + + Sbjct: 207 EAPVVIYPGNPQGRHLGENG-ARGCFVVDVSSGGDISTRFMETDSVRWYIREISIEGLEK 265 Query: 283 KGDL-ASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRK 323 +G+L S+ +QL++ R+ S V + LH I R+ Sbjct: 266 EGELIESLQSQLDEMRENSGGRSVICSFVLKGRGPLHHIFRQ 307 >UniRef50_D1B7B2 Metallophosphoesterase n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B7B2_THEAS Length = 361 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 90/416 (21%), Positives = 146/416 (35%), Gaps = 76/416 (18%) Query: 1 MRILHTSDWHLGQN-----FYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSP 55 +R +HT+DW +G +++ E + +LE A+ D ++VAGDVF+ Sbjct: 2 VRFIHTADWQVGMRAVQVGSAAETVRRERLEAVRRILEVARKRCADFLLVAGDVFEDNRV 61 Query: 56 PSYARTLYNRFVVNLQQTGCHLVVLAGNHDS--VATLNESRDIMAFLNTTVVASAGHAPQ 113 R L R + L ++ C + +L GNHD + + R + N TV+ A Sbjct: 62 D---RVLVQRLLDLLSRSPCPVYLLPGNHDPLVPGAVWDHRGFASPGNVTVLRRAAPV-- 116 Query: 114 ILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRG 173 PG VL P P E Q I R Sbjct: 117 ------AAPGCVLYPCPVASK-------------ESNQDPTGWIP-------------RE 144 Query: 174 DQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHR---AQIIG 230 LP I H + G + S I + DY+ALGH H Q Sbjct: 145 GAGLPRIGVAHGSVEGPNVSPWDHPIPRDAAERC------GLDYLALGHWHSTGTFQDRT 198 Query: 231 GMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLK-----GD 285 G + Y G+P P SF E S V LV G S++ + + + + + Sbjct: 199 GAVRMAYSGTPEPTSFGER-DSGNVLLVEVEAGSPPSIQVIPTGRLEWVRMEETLLGPKS 257 Query: 286 LASITAQLEQWRDVSQEPPVWLDIEITTDEYL-HDIQRKIQALTESLPVEVLLVRRSREQ 344 L + +LE + I +T ++ ++A+ + L L R + Sbjct: 258 LEGLKGRLEALPEPGST-----LIHLTLRGHMSPQCLDDLEAIRQVLEARFLWHRIHEDP 312 Query: 345 RERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQH--LFT--TTLHTLAG 396 + + +L E + R +AL LD + ++ +F L + G Sbjct: 313 ------WEVDRSWIQLLPEGM-LREVALRLLDRGEDPAVRDRAVFEMYRILKEVRG 361 >UniRef50_Q96YR6 DNA double-strand break repair protein mre11 n=11 Tax=Sulfolobus RepID=MRE11_SULTO Length = 387 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 71/399 (17%), Positives = 132/399 (33%), Gaps = 53/399 (13%) Query: 3 ILHTSDWHLGQNFYSKS-REAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYART 61 ILH SD HLG+ Y+ RE + L++ A VD II GD+FD PP+ A Sbjct: 6 ILHISDTHLGKRQYNLDFREQDVYDTFSQLIDIAIKEHVDGIIHTGDLFDINDPPNKAEI 65 Query: 62 LYNRFVVNLQQTGCHLVVLAGNHDSVATLNE--SRDIMAFLNTTVVASAGHAPQILPRRD 119 + R + L++ G +V+AG+HDS + I+ + S P L Sbjct: 66 VAIRELKRLKEAGIPFIVIAGDHDSPKKFTAIYPQKILEEFDLIKFLSKPDTPYKL---- 121 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 + I + + ++ + + Sbjct: 122 --GEITIYGISH-------------------------VPNVAKERLKELLSRLKPENKKS 154 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQ--IIGGMEHVRY 237 I H + I I Y ALGH H + + G + Sbjct: 155 ILLLHQGLKEVLPYEGAWQIQID-------DLPKAFSYYALGHFHTRRVFQLDGGRIIEI 207 Query: 238 CGSPIPLS----FDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKG-DLASITAQ 292 GSP L + K L+ FS + Q + L +L + Sbjct: 208 AGSPDILREEEIEGYEKEGKGATLIDFSGDIPTIQKINIDVRKQYVVTLNTNNLREEIRK 267 Query: 293 LEQWRDVSQEPPVWLDIEITTDEYLHD-IQRKIQALTESLPVEVLLVRRSREQRERVLAS 351 L + D + E I + + + +++Q + P + ++E+ E+ + Sbjct: 268 LREKYDTNNEKKPIFHIILEGKSIPKNVLMKELQEINNFAPYWRIYKDNTKEKDEKDVKI 327 Query: 352 QQRETLSELSVEEVFNRRL-ALEELDESQQQRLQHLFTT 389 + ++ ++E + L + E++ + + + Sbjct: 328 ---DLPTDTTIENLIYNYLVKIANFSETEARMIVDIINR 363 >UniRef50_B2V861 Metallophosphoesterase n=3 Tax=Sulfurihydrogenibium RepID=B2V861_SULSY Length = 382 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 77/398 (19%), Positives = 136/398 (34%), Gaps = 50/398 (12%) Query: 1 MRILHTSDWHLGQNFYS-KSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYA 59 MR LH SD HLG Y+ K RE ++ ++ A VD II GD F + P + + Sbjct: 1 MRFLHISDTHLGYQQYNLKERERDYFDVFQEAIDKAIEKNVDFIIHTGDFFHSSRPSNES 60 Query: 60 RTLYNRFVVNLQQTGCHLVVLAGNHD--SVATLNESRDIMAFLNTTVVASAGHAPQILPR 117 + L+ + V+ GNHD S + +I++ ++ Sbjct: 61 ILDGLYLIKKLKDHKIPMFVIPGNHDRGSGTRDRNALEILSEFGLRLLN---------TD 111 Query: 118 RDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPL 177 G + + ++ P + + D + D+ Sbjct: 112 FIEYNGVNIFGLKYISPIHFKRNI------------------VLKDILYDLYEKATDKNN 153 Query: 178 PIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQ--IIGGMEHV 235 I HL S ++ I DY+ +GH H+ Q I +V Sbjct: 154 FNILMLHLEFAPVFNSSELQTIS---------DIPFEYDYVGIGHYHQRQEPIKEEGRYV 204 Query: 236 RYCGSPIPLSFDECGK-SKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLE 294 Y GS F+E K +LV +E +E + + + D + I LE Sbjct: 205 VYPGSTEYTQFNEKSYVEKGCYLVEVGGKNIEKIEFVPL-NARKFLSYSIDYSEIDKFLE 263 Query: 295 QWRD----VSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLA 350 ++ L + I T E + + +++L E L ++ Q ++ Sbjct: 264 DMEKDLNSLNLNKKPILSLNINTQENISNKDILRILESKNLIKEFLHIKIFVNQNKKDTL 323 Query: 351 SQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFT 388 + +E S V +L DE + +L+ +F Sbjct: 324 DDTTSSNTE-SFSAV--EKLKEVVDDEELRIKLEEIFK 358 >UniRef50_C6D5T8 Metallophosphoesterase n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D5T8_PAESJ Length = 422 Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 67/341 (19%), Positives = 119/341 (34%), Gaps = 53/341 (15%) Query: 2 RILHTSDWHLGQNFYSKSREAE---------HQAFLDWLLETAQTHQVDAIIVAGDVFDT 52 R +H +D HL F S+ + + L L +TA QVD I+++GD++D Sbjct: 6 RFIHAADLHLDSPFRGMSKVPDALKEKLMASTFSALRRLSDTAIQEQVDFIVISGDLYDE 65 Query: 53 GSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP 112 A+ L + LQ+ G + V+ GNHD + ++ N T + G Sbjct: 66 ADRSLKAQFLLLKEWERLQRYGISVFVIHGNHDPLN--GAKAELKLPSNVTQFGANGMEY 123 Query: 113 QILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLR 172 + R+G A + + + ++H+ I Y Sbjct: 124 RPAYCRNGELAAFVYGMSY-----------------GKRHVTENIAARYSPV-------- 158 Query: 173 GDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGM 232 + IA H G D L+ + F DY ALGHIH +++ Sbjct: 159 -EGAPFHIALLHGNVNGDPSHD---PYAPCLLEELTGKGF---DYWALGHIHTRKVLHEY 211 Query: 233 EHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQ---------PMAVLK 283 HV Y G+ + E G K ++ S + + + + + + + Sbjct: 212 PHVVYSGNIQGRNPRETG-PKGCYVAEVSASRAVQLTFIPLDDVRWLDAELSINGLHTEQ 270 Query: 284 GDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKI 324 L + +EQ PV + + + LH ++ Sbjct: 271 ELLQQMEELVEQLAAEGDGRPVMVRLTLEGQGPLHHKLTEM 311 >UniRef50_A4J7M8 Metallophosphoesterase n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J7M8_DESRM Length = 453 Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 84/439 (19%), Positives = 158/439 (35%), Gaps = 71/439 (16%) Query: 1 MRILHTSDWHLGQ-NFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYA 59 ++ +H SD HLG+ K + + L ++++ A +VD ++VAGD++D+ S Sbjct: 4 LKFIHCSDIHLGRQRLGGKLPDEDFARALGYIVQVALEQRVDGLLVAGDLYDSPSIQPPI 63 Query: 60 RTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLN----TTV--VASAGHAPQ 113 ++ LQ+ + ++ GNHD E+ + +LN + + P Sbjct: 64 LQQAINCLMPLQEANIPIFIIEGNHDRATVTGETHTWVRYLNDIGLVHLLSIPFNAEGPV 123 Query: 114 ILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRG 173 + P D +R II + G K+ L++ D +Q+ A Sbjct: 124 LTPWDDTAKRGSYIDYKGVR---IIGAGYLGAGTIKRARLISEAMDQWQEPVPTAK---- 176 Query: 174 DQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNF----PPADYIALGHIHRAQII 229 I H D + F + DY+ALGHIH+ + Sbjct: 177 ------IMLLHAGP----------DYMVQEGGGFSKETLEFLHERVDYLALGHIHKP--L 218 Query: 230 GGMEHVRYCGSPIPLSFDEC---GKSKYVHLVTFS---NGKLESVENLNVPVTQPMAVLK 283 GSP + +EC G+ + + ++ L+ E L+VP + + L+ Sbjct: 219 NHDGWAVNPGSPEHVRLEECRYDGQPRGMAVMEIDPFAPHPLQRAEILSVP-KRRVINLR 277 Query: 284 GDLASITAQLEQ------------WRDVSQEPPVWLDIEITTDEYLHDIQRKIQALT--- 328 D + + ++ ++ + +E+T L I+ AL Sbjct: 278 YDCSPHGNKTKRAMDGIQQEVATLLKEAGAGSEDAVRLELTGAVNLGRIRLDTDALATFL 337 Query: 329 -ESLPVEVLLVRRSREQ--------RERVLASQQRETLSELSVEE-VFNRRLALEELDES 378 E LPV+ + + Q E S RE++ ++ + V+ LA E Sbjct: 338 EEKLPVKAVEINSGGLQLATGDIVGAETADTSPSRESIELRAISDLVWEHPLAG---LEE 394 Query: 379 QQQRLQHLFTTTLHTLAGE 397 + LF + + Sbjct: 395 HTDLVADLFYQLKEDVRNK 413 >UniRef50_Q12WJ5 Metallophosphoesterase-domain protein n=1 Tax=Methanococcoides burtonii DSM 6242 RepID=Q12WJ5_METBU Length = 436 Score = 141 bits (355), Expect = 4e-32, Method: Composition-based stats. Identities = 50/284 (17%), Positives = 90/284 (31%), Gaps = 44/284 (15%) Query: 3 ILHTSDWHLGQNFYSKS---------REAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTG 53 +H +D HL F S + +++ D ++++GD++D+ Sbjct: 17 FVHAADLHLDSPFLGLSEINTKLSQVMAKATFDAYNNIIDLCIEKNADFLLISGDIYDSA 76 Query: 54 SPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ 113 YA+ + + L G + GNHD + S + N + S Sbjct: 77 DKSLYAQLKFLEGLKRLSSAGIAAYITHGNHDPLN--GWSASLEWPANVKIF-SGDDVET 133 Query: 114 ILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRG 173 + +DG A + I + T + Q++ A + + Sbjct: 134 VFVEKDGNVIASINGISYR-------------------------TKHIQENLAKRFQKKD 168 Query: 174 DQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGME 233 I H T I L DY ALGHIH Q++ Sbjct: 169 ALSPFTIGMLHCTVDSGGGHYPYAPCSIQDLKE------TNYDYWALGHIHYPQVLETDP 222 Query: 234 HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQ 277 ++ Y G+P + E G + LV ++ + V + Sbjct: 223 YIVYSGNPQGRNPGELG-ERGCTLVEVDQKGNIKLDFVPVDSVR 265 >UniRef50_UPI0001788541 metallophosphoesterase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788541 Length = 435 Score = 141 bits (355), Expect = 4e-32, Method: Composition-based stats. Identities = 66/346 (19%), Positives = 115/346 (33%), Gaps = 59/346 (17%) Query: 2 RILHTSDWHLGQNFYSKSREAE---------HQAFLDWLLETAQTHQVDAIIVAGDVFDT 52 R +H +D HL F S + L+ L+E A QVD I+++GDV+D+ Sbjct: 5 RFIHAADLHLDSPFIGISGLDDDLRSFVQESTFRALERLVELAIGEQVDFIVISGDVYDS 64 Query: 53 GSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP 112 + A+ + + L + G + V+ GNHD + + S + + V + A Sbjct: 65 SNISLRAQLRFLDSLNRLGREGIAVYVIHGNHDPLDSAKLSMTL--PSHVHVFGAEPAAV 122 Query: 113 QILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLR 172 + R D AV+ + + + D +R Sbjct: 123 TAVRRSDQQEVAVIAGMSYPTSK-----------------------------VTDNIAIR 153 Query: 173 GDQPLP---IIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQII 229 P P I H G + + L Y ALGHIH + + Sbjct: 154 YPAPSPGLYHIGLLHANVDGDPQHETYAPCTKKELVQ------AGFHYWALGHIHSRRTL 207 Query: 230 GGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASI 289 ++ Y G+ E G K ++V + + ++ ++ + Sbjct: 208 QESPYIVYPGNIQGRHVRETG-PKGCYVVDVDGSFNTKL------SFHELDSMRWNV--V 258 Query: 290 TAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQ-ALTESLPVE 334 A ++ RDV + I T D I+ +T PV Sbjct: 259 EAPIDACRDVDEWRRSLESILTDTARANADRLSMIRVRVTGRSPVH 304 >UniRef50_A0B982 Metallophosphoesterase n=1 Tax=Methanosaeta thermophila PT RepID=A0B982_METTP Length = 375 Score = 141 bits (355), Expect = 5e-32, Method: Composition-based stats. Identities = 77/389 (19%), Positives = 129/389 (33%), Gaps = 66/389 (16%) Query: 1 MRILHTSDWHLGQNFYSKSREAE---------HQAFLDWLLETAQTHQVDAIIVAGDVFD 51 MRI+H +D HLG F S SR E +E + DA++ AGDVF Sbjct: 1 MRIVHIADTHLG--FQSFSRMDEKGRNLMEECIYRDFGQAIERITELKPDAVVHAGDVFH 58 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA 111 P ++ + + L G ++V++GNHD+ + + + V A Sbjct: 59 HVRPRIRPLYIFKQSLERLSDAGIPVIVISGNHDAPKSYSALSPFYLYDGMKDVYIAHRY 118 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 R V IPF + Q+ Y + + Sbjct: 119 ---RYERFEVGDHVFHCIPFC---------------------------FTQEDYLEEFRK 148 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFP-PADYIALGHIHRAQIIG 230 ++ H A + +++ + YIALGH H + I Sbjct: 149 IKMCGSDVLVM-HGLVE-ALRDQSMKPV---GEHIVSDSFLKSDFSYIALGHYHDQRRI- 202 Query: 231 GMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDL---A 287 ++ Y GS +F+E + K +V S G +ES+ NV M V++ D Sbjct: 203 -AQNTWYSGSIEYFNFNEAPQRKGALMVDLSTGGVESIGVPNV----GMRVIELDCFGRT 257 Query: 288 SITAQLEQWRDVSQEPPVWLDIEI---TTDEYLHDIQRKIQALTESLPVEVLLVRRSREQ 344 + + E + +++ Y QR++ L S+ + Sbjct: 258 AEEILDLIEEECGGERDKIVRVDLRRVNRAAYRRMDQRRLSRLAASMFCLKIKPEYDETA 317 Query: 345 RERVLASQQRETLSELSVEEVFNRRLALE 373 R + +R L F R L E Sbjct: 318 RAEEIKPPERLDLE-------FVRFLEGE 339 >UniRef50_C8X1L4 Metallophosphoesterase n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X1L4_DESRD Length = 416 Score = 141 bits (355), Expect = 5e-32, Method: Composition-based stats. Identities = 75/424 (17%), Positives = 142/424 (33%), Gaps = 67/424 (15%) Query: 2 RILHTSDWHLGQNFYSKSREAE---------HQAFLDWLLETAQTHQVDAIIVAGDVFDT 52 R LH +D HL + + LD L+ AQ +V +++AGD+FD Sbjct: 4 RFLHAADLHLDSPLRGLETYPDAPVEQIRNATRRALDNLVTLAQEQEVAFVLLAGDIFDQ 63 Query: 53 GSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP 112 + + + + L++ G + ++GNHD+ + + + N ++ Sbjct: 64 SWRDFHTALFFAQCMGRLREAGIPVYGVSGNHDAANPI--GKTLRPPDNVHFFSATKPGS 121 Query: 113 QILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLR 172 L + + + E + L A Sbjct: 122 VTLEHCNT-----------------VIHGQSYSSRETSEDLAAEYPPAVAGAL------- 157 Query: 173 GDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGM 232 I H + G + + L DY ALGH+H +++ Sbjct: 158 ------NIGLLHTSLTGRPGHEPYAPTHPDILGN------KGYDYWALGHVHEREVVTRD 205 Query: 233 EHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLA----- 287 + + G+ E G K LV +G++ V + ++ V + +G++ Sbjct: 206 PWIVFPGTIQGRHIRETG-PKGCSLVEVEDGRIRDVVHQDIDV---LRWFRGNVECGPCT 261 Query: 288 -------SITAQLEQWRDVSQEPPVWLDIEITTD----EYLHDIQRKIQALTESLPVEVL 336 ++ A+L+ RD + PV + +E T LHD QR Q +L E+ Sbjct: 262 CDDDVRHAVRAELQAARDAGEGRPVAVRLECTGATQMHAQLHDRQRHFQEEWRTLAAEMG 321 Query: 337 LVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAG 396 + + + Q + + S + +A +EL ES L+ L + Sbjct: 322 DLWIEQIRLHTRPPEDQSQEVDPESPLGELMQCIAAQELPESCTNELEDLMKQLPKEITE 381 Query: 397 EHEA 400 E Sbjct: 382 GEEG 385 >UniRef50_B5Y7X6 Exonuclease SbcD n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y7X6_COPPD Length = 381 Score = 141 bits (354), Expect = 7e-32, Method: Composition-based stats. Identities = 79/404 (19%), Positives = 141/404 (34%), Gaps = 44/404 (10%) Query: 1 MRILHTSDWHLGQNFYSK---SREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSP-P 56 MR+L T DWHLG + + R E QA L+ +L+ +VD I V GD P Sbjct: 1 MRVLVTGDWHLGAVTWRRKPQDRTPEIQACLNEILDFLSQERVDLIAVTGDFTHYWVPLE 60 Query: 57 SYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILP 116 + ++ L + +V + GNHD ++ + + +V G L Sbjct: 61 GEKQRWLMDYLYALSEH-APVVGVLGNHDWRGLVSFDK-FARKKDVYIVDKFGQ----LE 114 Query: 117 RRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQP 176 + +P+ R ++ L + D +Q + R Sbjct: 115 LNLNGTKVCIVILPYFDARKVLQPYQKLTS--------NGVKDTAKQVVLNDLSPRSCSW 166 Query: 177 LPI--IATGHLTTVGASKSDAVRDIYIGTLDA-FPAQNFPPADYIALGHIHRAQIIGGME 233 I H G + S+ +G D P D+ LGHIH AQ+I Sbjct: 167 DANYRILITHGVVEGLAYSE------LGGNDVPIPKSALSQFDFALLGHIHNAQVIKDDS 220 Query: 234 HVR----YCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASI 289 R Y G L F E G ++ +V S + + +P+ + + Sbjct: 221 TGRIVGCYPGGVAKLDFGEMGSTQGFWIVDLSPKGP-DCKLIQFSSQKPLKRV-----EV 274 Query: 290 TAQL-EQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERV 348 + + R+ ++ + + + +Q L + PV V+ ++ + Sbjct: 275 AGPVTPEVREEIMRTNGYVKAVLKEGDLV-----TVQKLYDLEPVVVVELKSAVSSGNEG 329 Query: 349 LASQQRETLSELSVEEVFNRRLA-LEELDESQQQRLQHLFTTTL 391 + + S+EE + L EL E ++ L F++ L Sbjct: 330 STGEGESKVRFSSLEEAYGLYLNHYPELAEDKRDELLRRFSSYL 373 >UniRef50_A8TGF4 Metallophosphoesterase n=1 Tax=Methanococcus voltae A3 RepID=A8TGF4_METVO Length = 391 Score = 140 bits (353), Expect = 8e-32, Method: Composition-based stats. Identities = 67/392 (17%), Positives = 128/392 (32%), Gaps = 55/392 (14%) Query: 1 MRILHTSDWHLGQNFYS-KSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYA 59 MR +H +D HL Y RE + + ++ + D ++ +GD+FD +P A Sbjct: 1 MRFVHIADTHLSNRQYGLDEREKDIYNSFNQCIDKIIELEPDFVVHSGDLFDRSNPSINA 60 Query: 60 RTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 + L++ + + GNHD +++ + + V+ + Sbjct: 61 MLTAIKGFEKLKEHKIPIYAIQGNHDMPRDISKGKPFVVLKR--VLGNEFFKTFGKENCH 118 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 +C + L IE++ +L + D Sbjct: 119 NIGDISVCGFDYYPVNKKPVIDEKLEEIEQKINL-----------------NQNDGVKKS 161 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIG--------- 230 I H G + + L + P DYIA GHIH+ ++ Sbjct: 162 ILLMHQGFNGF--------LPLDELCEVGIGDIPEVDYIACGHIHKRSLVSYDEDSNHKF 213 Query: 231 --GMEHVRYCGSPIPLSFDE----CGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKG 284 + Y GS LS E K + V F N L+ + + K Sbjct: 214 KTKSPLLAYSGSTDSLSEKEYYDYEKNGKGFYYVDFDNCDLDKNNIEKIN----IKCRKF 269 Query: 285 DLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQ 344 + + Q++ + + + I + ++ ++A L R R+ Sbjct: 270 EKIDVDNQID-YNTLVNNLKSYDSKPIAIGKVCEELYEPLKAKLNE---HTLFYRLVRKS 325 Query: 345 RERVLASQQRETLSELSVEEVFNRRLALEELD 376 E + + ET S+++VF + + LD Sbjct: 326 VEEIDITNVNET----SIKQVFEDYVYSKGLD 353 >UniRef50_Q0IAY7 DNA repair exonuclease n=1 Tax=Synechococcus sp. CC9311 RepID=Q0IAY7_SYNS3 Length = 394 Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 66/314 (21%), Positives = 110/314 (35%), Gaps = 57/314 (18%) Query: 2 RILHTSDWHLGQNFY------SKSR-EAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGS 54 R LHT+DW +G+ ++ ++R + E + + A +DA++VAGD+FD+ + Sbjct: 3 RFLHTADWQIGKPYHWIEDPQKRARVQQERVNAVSRIAAIASEQNLDAVMVAGDLFDSST 62 Query: 55 PPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNES-----RDIMAFLNTTVVASAG 109 L + + C ++V+ GNHD + M + Sbjct: 63 VSP---ALVMEVMEAIASIPCPVLVIPGNHDHGGAGGIWQRQDVQRQMRERCPNLELLLQ 119 Query: 110 HAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADAC 169 PQ++ G V+ P P LR RD + L + Sbjct: 120 TEPQVIA------GMVVLPCPLLRQRDSRSPADWLESLNWSS------------------ 155 Query: 170 KLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQII 229 Q P + H + G + V ++ D +P Q DYIALG H + Sbjct: 156 ---LPQNQPRVVLAHGSVQGFGAEEQVNQLH---HDRWPEQEL---DYIALGDWHALTQL 206 Query: 230 GGMEHVRYCGSPIPLSF--DECGKSKYVHLVTFSNGKLESVEN-----LNVPVTQPMAVL 282 YCG+P P F + + LV + V ++ + Sbjct: 207 N--PRAWYCGTPEPDRFPTSDQDQRSQALLVDLKRQQPPDVTPIAIGAISWHRIEAKVSS 264 Query: 283 KGDLASITAQLEQW 296 K DL + A +E Sbjct: 265 KADLQRLKATIESC 278 >UniRef50_Q041R3 DNA repair exonuclease n=28 Tax=Lactobacillus RepID=Q041R3_LACGA Length = 407 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 76/390 (19%), Positives = 141/390 (36%), Gaps = 59/390 (15%) Query: 1 MRILHTSDWHLGQNFYSKS----------REAEHQAFLDWLLETAQTHQVDAIIVAGDVF 50 M+ +H +D HL F S +++ ++F+ + +TA +VD +++AGD F Sbjct: 1 MKFMHLADAHLDSPFQGLSFLPSNEFNNIKQSTQKSFIKAI-DTALDQKVDLVLIAGDTF 59 Query: 51 DTGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGH 110 D+ P ++ ++R V L +V++ GNHD LN I+ + Sbjct: 60 DSVHPSPQSQLFFSREVKRLTDQEIQVVMILGNHD---YLNPDEMILPQTPYFKLLGPDE 116 Query: 111 APQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACK 170 + + F D + AG + YQ ++ + K Sbjct: 117 QVETVE--------------FKTKSDFPYTVAGFS---------------YQHNHIEVDK 147 Query: 171 LRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIG 230 + T L GA + A +++Y A +Y ALGHIH Q + Sbjct: 148 ISEFPNKGDNFTFGLMHAGAKTTAAYQNVYAPFTTAEIKDL--NYNYFALGHIHLRQTLS 205 Query: 231 GMEHVRYCGSPIPLSFDECGKSKYVHL--VTFSNGKLESVENLNVPVTQPMAVLKGD--- 285 + Y G+ +E G +K V++ V S ++ P+ MA L D Sbjct: 206 DKPPIVYSGNLQGRHINEQG-AKGVYVGTVDESTKEISLNFVETAPIIWQMATLNLDQVI 264 Query: 286 -LASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKI-------QALTESLPVEVLL 337 +T Q+ + + + I +YL + + ++ L SL + Sbjct: 265 SQTVLTKQIVEVLTKKNKHQTLFGLTIQGAQYLSEQELELVNDSDYWLQLANSLRFDSRP 324 Query: 338 VRRSREQRERVLASQQRETLSELSVEEVFN 367 V+ E++ + + + E F Sbjct: 325 VKVYLTNNEKLQLKTADKEAFDQAENETFE 354 >UniRef50_Q3B475 DNA repair exonuclease n=1 Tax=Chlorobium luteolum DSM 273 RepID=Q3B475_PELLD Length = 396 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 82/416 (19%), Positives = 137/416 (32%), Gaps = 54/416 (12%) Query: 1 MRILHTSDWHLGQNFYSKS-------REAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTG 53 M+ +HT+DW LG+ F S E + + E A ++VAGD+FD+ Sbjct: 6 MKFIHTADWQLGKPFAGISDSLKRAHVSRERIEAVRRIGEAAVREGASFVLVAGDLFDSL 65 Query: 54 SPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ 113 +P R + + + +VV+ GNHD + + AP Sbjct: 66 TP---ERATVSAACLAVGSIPVPVVVIPGNHDHGGPGSIWTRPF-----FLAERDSLAPN 117 Query: 114 ILPRRDGTP----GAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADAC 169 ++ + P GAV+ P P LR + A L + + + A D Sbjct: 118 LIVLLEERPYEIEGAVIFPCPLLRRSAVSDPAAWL----RDRQVFNAFGDL--------- 164 Query: 170 KLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFP--PADYIALGHIHRAQ 227 P I H + D + + + DY ALG H + Sbjct: 165 -------RPRILMAHGSIGEFQSLDDDDRVAGISSSSIDLGRLDRDAFDYAALGDWHGTK 217 Query: 228 IIGGMEHVRYCGSPIPLSFD--ECGKSKYVHLVTFSNGKLESVENLN-----VPVTQPMA 280 +G Y G+P F E + + LV S G + V+ L Sbjct: 218 QVGTK--AWYAGTPEQDRFSKGEENRPGNILLVEASRGAVPKVDVLRTSRLGWEALHYSF 275 Query: 281 VLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRR 340 DL ++ L+ +E +L + + +++ L +SL +L ++ Sbjct: 276 SSDSDLELLSGMLDGL--FQKEHGRFLLNLVLEGSLGLEASVRLEQLLQSLEARLLRLKL 333 Query: 341 SREQRERVLASQQRETLSELS--VEEVFNRRLALEELDESQQQRLQHLFTTTLHTL 394 R + S + RLA E + +L L LH L Sbjct: 334 ENRVRTAPGPVEIEALTGNASDPLTARVAGRLAGMAAGEGDEAQLAALALRELHGL 389 >UniRef50_C5RIL1 Metallophosphoesterase n=1 Tax=Clostridium cellulovorans 743B RepID=C5RIL1_CLOCL Length = 370 Score = 139 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 77/393 (19%), Positives = 138/393 (35%), Gaps = 61/393 (15%) Query: 1 MRILHTSDWHLGQNFY------SKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGS 54 +R+LH +D HL F ++R+ E + +++ + QV ++AGD FD + Sbjct: 3 VRVLHCADIHLDTAFSYLSNTLKENRQEELREVFSNIIKIIKERQVQIFLIAGDFFDVEN 62 Query: 55 PPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQI 114 S R + ++ H+ + GNHD N +D+ N + + I Sbjct: 63 VTSNTLYFLKRKLSEIKD--VHVFITPGNHDPYMLSNGHKDLETLDNVHIFKNEIEKIYI 120 Query: 115 LPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGD 174 + F+ Y D Sbjct: 121 EEL-----NVNVYGFGFMEK--------------------------YSNKPMLRDFQIED 149 Query: 175 QPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQII--GGM 232 + I H G SD+V + TL+ DY+ALGHIH+ + G Sbjct: 150 ENSINIMVTH----GDISSDSVYNPI--TLEDIKNSKL---DYLALGHIHKGTGLLKEGD 200 Query: 233 EHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPM-----AVLKGDLA 287 + Y G+P SF+E G K V L+ + G S E + V + GD Sbjct: 201 SYWAYPGNPQGRSFNEVG-EKGVLLLDITKGY-CSCEFIKTSVRDYLIYDIDISDMGDYG 258 Query: 288 SITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRER 347 IT ++ + D + + I + + +++L L + E + + Sbjct: 259 EITDKIIKDIDNMEYDKNYYRIILKGK-IEEGFKISMKSLFIKLQNHFHHIELVDETKYK 317 Query: 348 --VLASQQRETLSELSVEEVFNRRLALEELDES 378 + ++ +TL L + E+F +L + +E Sbjct: 318 IDIEKIKESKTLKALVITELFKLKLED-QFEEE 349 >UniRef50_D2EG17 Metallophosphoesterase n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EG17_9EURY Length = 392 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 71/420 (16%), Positives = 140/420 (33%), Gaps = 64/420 (15%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ +H D H+GQ + + +R + + ++ A ++D I+ +GD+FD+G+PP + Sbjct: 1 MKFIHVGDTHIGQVYKNDTRNNDIKEAFTQMINYAVAEKIDFIVHSGDLFDSGNPPLDSL 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHD-------SVATLNESRDIMAFLNTTVVASAGHAPQ 113 + L+ G L V+ G+HD S+ L ++ LN+ G Sbjct: 61 LFVTDELNRLKTAGISLFVIPGSHDVGIGEEESIIELFHRNKLLINLNSKKYIKFGENVN 120 Query: 114 ILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRG 173 + + + A +C I R + + + Sbjct: 121 L--KGEVYKNAFICGIKGKRSK------------------------VEDEIFKKLKIEID 154 Query: 174 DQPLPIIATGHLTTV--GASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQ--II 229 + I H T G D + DY A GH H + I Sbjct: 155 NSVFIKIFAFHHTISYLGEKFKDLETE-----------SLPKGFDYYAAGHWHGHKEDIK 203 Query: 230 GGMEHVRYCGSPIPLSFDEC--GKSKYVHLVTFSNGKLESVENLNVPVT-QPMAVLKG-D 285 ++Y GS E ++ +V + + S+E + + + + + Sbjct: 204 YDKGIIQYPGSLEYCDEKEIVDNPNRGFFVVAYDKNGIISIEYKIIKTRNKQIFTINANN 263 Query: 286 LASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQR-----KIQALTESLPVEVLLVRR 340 +I + E + + L +++ L D KI+ + L + + + Sbjct: 264 KKAIDLETEAISKLKKNDGDILVLKLEGK--LEDKASGVNIIKIKKIGYELGYSYISINK 321 Query: 341 SREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQR---LQHLFTTTLHTLAGE 397 S+ + A ++ ELS E L + DE + + L + E Sbjct: 322 SKLNDKDTDALEEDIKTKELSTIE--YEFLKKKGYDEKEIKIARYLIDSLQENTEDIKKE 379 >UniRef50_C5RCI7 DNA repair exonuclease n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RCI7_WEIPA Length = 397 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 82/431 (19%), Positives = 152/431 (35%), Gaps = 85/431 (19%) Query: 1 MRILHTSDWHLGQNFYSKSREAE---------HQAFLDWLLETAQTHQVDAIIVAGDVFD 51 M+ +H D HLG F S + + + L++ A T VD +++AGD+FD Sbjct: 1 MKFIHAGDLHLGNPFGGLSMTPDWLTDQLQAATETAVHRLVDDAITAAVDFVVLAGDLFD 60 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA 111 T +P + A+ R + L + V GNHD V L+ R N T+ Sbjct: 61 TTTPDARAQLDLVRELERLATENIPVYVGFGNHDYV--LDWQRVPTFPKNVTLF------ 112 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 P+D+ T K +A Y Q + ++ Sbjct: 113 ----------------------PKDVTTYHMQT----KNHESVAISGFSYTQRHITTDQV 146 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPA----------DYIALG 221 + +++ D IY G++ + N+ P DY ALG Sbjct: 147 AE------------FPIKSTQDDWHIGIYHGSMGEVGSGNYAPFNLQAMQQKHYDYWALG 194 Query: 222 HIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAV 281 HIH + + + Y GS L E G +K ++V +L P+T A Sbjct: 195 HIHVRETLQKKPFIGYSGSIQGLDKTETG-AKGYYMVESEGNELVPTFTPVAPITWVTAE 253 Query: 282 LKGDLASITAQLEQWRD--VSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVE----- 334 ++ + ++ ++ R ++ + + + T++ Q L Sbjct: 254 VRTE-RDLSTVVQYVRGQFAMKDEFELISLNLITEDPNVLSAIVNQQLLAQFVAAAQTTD 312 Query: 335 ---VLLVRRSREQRERVLASQQRETLSELSVEEVFNR----RLALEELDESQQQRLQHLF 387 + ++ +++ L + SE ++ +VF R ++ L+++ + L H Sbjct: 313 MFFIYEIQAQTQEQHLPLPAVDERYWSE-TIGDVFTREQLQKMGLKQVTDV--DVLDHFL 369 Query: 388 T-TTLHTLAGE 397 TL L Sbjct: 370 NAQTLQALQEA 380 >UniRef50_B6AP26 DNA repair exonuclease n=1 Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6AP26_9BACT Length = 410 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 69/412 (16%), Positives = 134/412 (32%), Gaps = 76/412 (18%) Query: 1 MRILHTSDWHLGQNFYSKSREA-EH--------QAFLDWLLETAQTHQVDAIIVAGDVFD 51 M+ H SD HL + + + E + L++ +V +++ GD+FD Sbjct: 1 MKFFHASDIHLDSLLRNLALDEPEQIGRIRHATRDAFGTLVDRCIEEKVSLLLLVGDLFD 60 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA 111 +P + L + G +V++ GNHD+ + D+ Sbjct: 61 RDNPNMQIVRFLRHELGRLDREGIRVVIVKGNHDADNRIGRFLDL--------------P 106 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 + D P + P + + Q +T+ Y Sbjct: 107 SNAVVLDDARPQQLAFPDLGV-------------AVTGQSFSPGPVTENLALAYP----- 148 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG 231 IA H + G ++ + + L A DY ALGHIH+ +I+ Sbjct: 149 PPLPGFFNIALLHTSLSGYTEHEPYAPCSLNDLQA------RKYDYWALGHIHKREILSR 202 Query: 232 MEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQ---------PMAVL 282 + Y G+ + E G K V ++ S++ + + V + + Sbjct: 203 DPAIIYPGNLQGRNAKETG-PKGAMCVEVEGNRIISLDFVPLDVVRWHSLQIDSTGIRET 261 Query: 283 KGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSR 342 ++ +LE+ +S P + + ++ L ++ R Sbjct: 262 AILAKTVRQKLEEVLQLSDGRPAAVRVTFSSRSSLTGS----------------VLDRPE 305 Query: 343 EQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTL 394 R VL +L +L +E+V R+ + + RL F L + Sbjct: 306 SLRSWVLEVASELSLDDLWIEKV---RVERPQERDRPVSRLDSDFAAVLAEV 354 >UniRef50_A5F9P1 SbcCD related DNA repair protein n=2 Tax=Clostridium kluyveri RepID=A5F9P1_CLOK5 Length = 1258 Score = 137 bits (344), Expect = 8e-31, Method: Composition-based stats. Identities = 71/411 (17%), Positives = 145/411 (35%), Gaps = 29/411 (7%) Query: 1 MRILHTSDWHLGQ----NFYSKS-REAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTG-S 54 M+I H SD HLG+ + R + +D+ Q D I++ GD+F S Sbjct: 1 MKIAHISDIHLGEFPGPIVDGMNGRMKDIVTCMDYASNKLIEEQPDIILIVGDLFHRAKS 60 Query: 55 PPSYARTLYNRF---VVNLQQTGCHLVVLA-GNHDSVATLNESRDIMAFLNTTVVASAGH 110 A + + L +++ GNHD++ RD M N T++ Sbjct: 61 WGDEALKEISIASVWLRRLASIAPTVLLYGTGNHDNLNYFKNIRD-MGIENLTIIT---- 115 Query: 111 APQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACK 170 P + + +P + T G++ ++ + + A+ + ADA Sbjct: 116 EPDFFTINTQSGDIQIAAVPGMDKGFFRTLYPGMDFTDENKAISEALGNVIVGISADA-- 173 Query: 171 LRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADY--IALGHIHRAQI 228 + +P + H T G + +++ + P ++Y + LGHIHRAQ Sbjct: 174 ---EPNIPCVLMSHYTVTGCQLENGE-SVFLNSDVVLPTAALQASNYNLVCLGHIHRAQE 229 Query: 229 IGGMEH-VRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLA 287 + Y G ++F+E G+ K + + P + K Sbjct: 230 VPNCGRPTFYSGPLNGITFNEEGQDKGFWIHECVGEFGVFSKFFKTPS-REFLTFKWVQQ 288 Query: 288 SITAQLEQ---WRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQ 344 + ++ D+ + + + D+ + + + + V+ R Sbjct: 289 HLDFYMKNGIPKGDIENIKDKIVRVIYSCDDETNKQFNRKELEKQLYAAGAFYVQEIRPS 348 Query: 345 RERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLA 395 + +Q + ++ SV L EE+ E+ + + L ++ +A Sbjct: 349 KILTTTDKQSMSEND-SVMHNLKDYLKREEVPENDIKDILALAEPLINEIA 398 >UniRef50_Q03GD7 DNA repair exonuclease n=2 Tax=Pediococcus RepID=Q03GD7_PEDPA Length = 407 Score = 137 bits (344), Expect = 8e-31, Method: Composition-based stats. Identities = 70/364 (19%), Positives = 125/364 (34%), Gaps = 56/364 (15%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQA---------FLDWLLETAQTHQVDAIIVAGDVFD 51 M+ +H +D HLG F + + L++ A + VD + +AGD+FD Sbjct: 1 MKFIHAADIHLGSPFQGLKNIPANIRKRVVSSTGVAMKNLVQAAIENTVDFVCIAGDLFD 60 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA 111 P L + L + + GNHD LN + F + + Sbjct: 61 NPEPDLETLNLAIDQLEILNAANIPVFLSYGNHD---YLNAKIPGVIFPDNVSIFGEKVE 117 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 + + DG+ T K+ + A I +Y Sbjct: 118 TKQITLVDGS-----------------TVDITGFSYNKRAEINARIEEY---------PS 151 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG 231 + +Q I H + G S+A + DY ALGHIH+ Q + Sbjct: 152 KSNQADFQIGMLHGSMDGLKSSEAHYAPF-----TISQLLAKNYDYWALGHIHKRQTLND 206 Query: 232 MEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVT----QPMAVLKG-DL 286 M + Y G+ +E G + + LVT + K V+ L V + KG DL Sbjct: 207 MPVIAYAGNTQGRHINEPG-PRGISLVTINQQKQTDVQFLRTDVVEWTNVAVQAQKGMDL 265 Query: 287 ASITAQ-LEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQR 345 I + ++ ++ + ++I + L + + L ++L + ++ Sbjct: 266 QQIISAIIQAVEPLAAQQLKLVNINLQNSNVLTP------EILDELTSGIVLTQIQKQLD 319 Query: 346 ERVL 349 + V Sbjct: 320 QEVF 323 >UniRef50_Q03QD8 DNA repair exonuclease n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03QD8_LACBA Length = 404 Score = 137 bits (344), Expect = 9e-31, Method: Composition-based stats. Identities = 74/382 (19%), Positives = 128/382 (33%), Gaps = 58/382 (15%) Query: 1 MRILHTSDWHLGQNFYSKSRE---------AEHQAFLDWLLETAQTHQVDAIIVAGDVFD 51 M+ +H +D HL F + A + + + A + VD +++AGD+FD Sbjct: 1 MKFIHAADLHLDSPFLGLTNLPNSLLTVIRQSTFAAVTKVFDRAISEHVDFVVLAGDLFD 60 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA 111 A+ L+ + V+ GNHD +A ++ + I N V + Sbjct: 61 RSEQSVAAQAYLFEQFDRLRLANIPVFVIFGNHDFLA--DQHQPIAYPENVHVFGATVET 118 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 + G + F P+ + + + LAA + + Sbjct: 119 KTLTT----AAGETVALSGFSYPQRWV-----------EANPLAAFPNRAATDW------ 157 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPP-ADYIALGHIHRAQIIG 230 HL + + +D Y A DY ALGHIH+ QI+ Sbjct: 158 ------------HLGLLHGAIKSGSQDHY---APFTRADLLSKRYDYWALGHIHQHQILN 202 Query: 231 GMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVL----KGDL 286 V Y G+ S +E G +K +LV L + + + DL Sbjct: 203 TQPPVVYAGNTQGRSINETG-AKGAYLVESDGTALVPHFFETTVIGWDIPEVMTTSAADL 261 Query: 287 ASITAQLEQWRDV-SQEPPVWLDIEITTDEY----LHDIQRKIQALTESLPVEVLLVRRS 341 ++ L QW + P + I + LHD++ AL + +L + Sbjct: 262 PAVGQALTQWVTTHATTLPTLTALSIQAPQLVPTDLHDLETDWLALYQRTHARLLKEHQR 321 Query: 342 REQRERVLASQQRETLSELSVE 363 R V + T +L + Sbjct: 322 YFIRLNVALPESTLTAPQLDQQ 343 >UniRef50_O07522 Uncharacterized metallophosphoesterase yhaO n=5 Tax=Bacillus RepID=YHAO_BACSU Length = 408 Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 65/306 (21%), Positives = 102/306 (33%), Gaps = 46/306 (15%) Query: 3 ILHTSDWHLGQNFYSKSREAE---------HQAFLDWLLETAQTHQVDAIIVAGDVFDTG 53 +H +D HL FY S E A + +++ A VD I++AGD+FD Sbjct: 7 FIHAADLHLDSPFYGISHLPEPIFARIKESTFASVRHMIDAAVREHVDFILLAGDLFDEA 66 Query: 54 SPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ 113 + A+ + L++ G + V+ GNHD + E I N + S+ + Sbjct: 67 NRSLKAQLFLKKQFERLRECGISVYVIFGNHDHLG--GEWTPIEWPENVHIF-SSAVPEE 123 Query: 114 ILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRG 173 ++G A + + ++ A + Sbjct: 124 KSFFKEGRRIASIYGFSYQ-------------------------ARALMENQAARYRRST 158 Query: 174 DQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG-M 232 D P I H T G+ D L DY ALGHIH+ Q++ Sbjct: 159 DAPFH-IGMLHGTLSGSEGHDPYCPFTHDDLVK------SGMDYWALGHIHKRQVLSAEH 211 Query: 233 EHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQ 292 V Y G+ E G K +LV +NG + V A + A Sbjct: 212 PAVIYPGNTQARHIKETGD-KGYYLVHVTNGDISYEFQRAHDVLWEKAAVDVTEAKNMTA 270 Query: 293 LEQWRD 298 L Q + Sbjct: 271 LFQMVE 276 >UniRef50_Q39WB4 Metallophosphoesterase n=2 Tax=Geobacter RepID=Q39WB4_GEOMG Length = 376 Score = 136 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 74/404 (18%), Positives = 129/404 (31%), Gaps = 46/404 (11%) Query: 1 MRILHTSDWHLGQNFYS-----KSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSP 55 +RILHT+D HLG + + + R + D ++ A +VD ++VAGD+FD Sbjct: 3 IRILHTADLHLGSSLKNFGELARERRRDFLKTFDRIVNLAIKREVDCLLVAGDLFDATQV 62 Query: 56 PSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQIL 115 + L G +V++ G HD+V + + F ++ Sbjct: 63 DAETVGRVQDGFERLSGRGISVVLIPGTHDNVVSAESVYNRTTFAGAHIL---KDPVVTD 119 Query: 116 PRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQ 175 P GA + F D + A R + Sbjct: 120 PFALEIRGATVHFYGFAYRSD-------------------------RSREALESMRRREG 154 Query: 176 PLPIIATGHLTTVGASKSDA-VRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEH 234 + H + G+ + + +DI T + DYIALGH H + Sbjct: 155 GGIHVGLLHGSLKGSPEWEMRKKDIPFTTAELAAL----GLDYIALGHYHNVGCLEDQGR 210 Query: 235 VR--YCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQ 292 V Y GSP F E G+ V +V G + + L Sbjct: 211 VVACYPGSPEGKKFGENGERH-VLIVEVGEGSAVVEKVPVQSRIMDELTVDASLFPEAGA 269 Query: 293 LEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQ 352 LE P + I + + + + L+ + + Sbjct: 270 LEGELARLASPDLIARIRLAGTVEDPLDIANLAGRLQGTYAWLELLDETEIYNSDHVKRM 329 Query: 353 QRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAG 396 +RE S+ +F R++ ++++ + Q L L + G Sbjct: 330 ERED----SIRGLFIRKVHAR-FEKAESEAEQELCRDALKLVMG 368 >UniRef50_D1CDB4 Metallophosphoesterase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDB4_THET1 Length = 435 Score = 136 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 67/370 (18%), Positives = 133/370 (35%), Gaps = 42/370 (11%) Query: 1 MRILHTSDWHLGQNFYSKS-REAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYA 59 ++ +HT+D HLG + Y S R + ++ + A +VD +++AGD+F + Sbjct: 3 VKWIHTADIHLGFHQYGISERADDFARAFKYVCDYAIDSRVDFMLIAGDLFHKRNIDGRT 62 Query: 60 RTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 + + +L+ ++ + GNH+ LN + FL+ A I Sbjct: 63 ISQAYLALRSLKDANIPVICVEGNHERA-FLNSGWSFLDFLS-------SAAELIHLLSP 114 Query: 120 GTPGAVLCPIPFLRPRDIIT-SQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLP 178 G + P+ + + G + ++ + +Q + KL+ D Sbjct: 115 VHRGGSVLMEPWDHESKLGSFIDLGPVRVYGIKYYGTSTGKILEQITS---KLQVDGNRF 171 Query: 179 IIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNF-PPADYIALGHIHRAQIIGGMEHVRY 237 I H G IG + ++ P Y+A+GH+H+ I Sbjct: 172 NIFMVHEGLEGQI------PRAIGGITSYHLDLIRPHCKYLAMGHVHKRYEIDN--WAFN 223 Query: 238 CGSPIPLSFDECGKSKYVHLV--TFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQ 295 GS S +E + + V + G++ V++++VP +P + D+ Sbjct: 224 PGSLETCSVEEADWERGFYEVTADINKGEVLEVKHISVPTRRPFYRIFLDVK-------- 275 Query: 296 WRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRE 355 + E + ++ +I +E+ ++ V S R + Sbjct: 276 ---------YYDTPEDLEKAVIDKVRSRIPKYSENPSQPIIHVTLSGSLRFSEELL-ALK 325 Query: 356 TLSELSVEEV 365 L E EEV Sbjct: 326 NLQEKIYEEV 335 >UniRef50_A8U9K7 Putative uncharacterized protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8U9K7_9LACT Length = 414 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 73/418 (17%), Positives = 139/418 (33%), Gaps = 77/418 (18%) Query: 1 MRILHTSDWHLGQNFYSKSREAEH---------QAFLDWLLETAQTHQVDAIIVAGDVFD 51 ++ +H +D HL F ++ + L +++ A + VD + + GD++D Sbjct: 2 VKFIHAADLHLDSPFIGLKNLPDYIWSAIYLSTFSALTKIVDRAIQNNVDFVCLVGDIYD 61 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA 111 A+ + L + + +L GNHD + + Sbjct: 62 NDERSVKAQAYLRNEMERLNKFNIPVYLLHGNHDYIE----------NTGLHL-----DM 106 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 P+ + D T +L ++ +K+ L IT+Y + Sbjct: 107 PENVILFDETVE-----TKWLTTKENEQIALTGFSYDKRWVLERKITNYPE--------- 152 Query: 172 RGDQPLPIIATGHLTTVG-ASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIG 230 R + I H + G S+ + L + DY ALGHIH+ Q + Sbjct: 153 RNPRATYHIGMLHGFSEGLESEHGHYAPFTMAELRS------KKYDYWALGHIHKRQHLA 206 Query: 231 GMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLK----GDL 286 + Y G+ S E G K LVT + + + + L +L Sbjct: 207 ENPPIVYPGNTQGRSSKESGD-KGFELVTITESGVTTEFCSTAVIQWKTIELSVKEMKNL 265 Query: 287 ASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRE 346 ++ L+ + Q L + I + H + I+ + + V Sbjct: 266 DTVYKALKTAIEEQQNESYSLFLSIRLTDNEHLLDGVIKKIKQGELV------------- 312 Query: 347 RVLASQQRETLSELSVEEVF--NRRLALEELDESQQQRLQHLF----TTTLHTLAGEH 398 E L ++ + F ++ L+ + E+ +Q LF T LH + E+ Sbjct: 313 --------EALQQIPKTDTFVWVHKIELQTVAENHIPAIQKLFPNEWTKILHEIEMEN 362 >UniRef50_C4ZHC2 DNA repair exonuclease n=3 Tax=Clostridiales RepID=C4ZHC2_EUBR3 Length = 354 Score = 136 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 80/402 (19%), Positives = 134/402 (33%), Gaps = 80/402 (19%) Query: 1 MRILHTSDWHLGQNF-------YSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTG 53 M+I+H +D HL +K R+ E ++E A+ + V AII+AGD+FDT Sbjct: 1 MKIIHCADLHLDSKMTSNLSKEQAKERKMEILRTYSRMIEYARNNDVKAIIIAGDLFDTR 60 Query: 54 SPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDS---VATLNE-SRDIMAFLNTTVVASAG 109 + + AR L + L GNHDS ++ L+E ++ F N S G Sbjct: 61 NVSATARNLVKDSIT--SNPDIDFYYLKGNHDSDNFISKLDEIPENLKLFSNQWTSYSYG 118 Query: 110 HAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADAC 169 + D + AV+ Sbjct: 119 NITITGLEIDKSNQAVMY-----------------------------------------N 137 Query: 170 KLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQ-- 227 L D + T H D +I G L DY+ALGH+H Q Sbjct: 138 SLVLDNDNYNVVTLH-----GQLGD---EISTGDLKN------KGIDYLALGHVHEYQSG 183 Query: 228 IIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDL- 286 + Y G FDECG+ K ++ + KL + + + + L D+ Sbjct: 184 QLDNRGMYCYSGCLEGRGFDECGQ-KGFVVLDIDDEKLTAGFSFVPFAYRSLYTLYVDVT 242 Query: 287 -----ASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRS 341 + ++E+ S+ + + E D + L + Sbjct: 243 GAMTTQDVAVKMEKAISDSEYSSRSMVKFVLVGEVDVDCEINTDFLKDMFE---EYFYYE 299 Query: 342 REQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRL 383 + E L E + S++ F R + ++ E Q+ + Sbjct: 300 KVYDETRLLINYSEYEKDASLKGEFIRMVLGSDMTEEQKSEV 341 >UniRef50_A0AKX5 Complete genome n=19 Tax=Listeria RepID=A0AKX5_LISW6 Length = 411 Score = 136 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 69/440 (15%), Positives = 137/440 (31%), Gaps = 78/440 (17%) Query: 1 MRILHTSDWHLGQNFYSKSRE---------AEHQAFLDWLLETAQTHQVDAIIVAGDVFD 51 ++ LH +D HL F S L+ ++ A +VD +++AGD++D Sbjct: 4 IKFLHIADLHLDSPFIGLSTLPQPLYSAVQESTFLSLERIITLAIKEKVDFVLIAGDIYD 63 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA 111 + A+ + + + L+ V+ GNHD + ++ N V Sbjct: 64 SEDQSVRAQARFLKEMKRLEDANIRAFVIHGNHDFIEK--HKEKLLLPDNVYVF--PEQV 119 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 + + + + A N ++ Sbjct: 120 EMATLETNQGVKVHIYGFSYGERHMRTSRVAEYNVQQEADF------------------- 160 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG 231 H+ + S+ + + + DY ALGHIH+ Q++ Sbjct: 161 ------------HIALLHGSELTSSEEHDVYAPFQIQEIIKKGFDYWALGHIHKRQLLTE 208 Query: 232 MEHVRYCGSPIPLSFDECGKSKYVHLVTFSN--------GKLESVENLNVPVTQPMAVLK 283 + Y G+ + E G K +VT S + + + + Sbjct: 209 SPSIYYPGNIQGRNRKESG-EKGASIVTMSETTTTIDFIATSPIIWEEVILTIPEDSEVN 267 Query: 284 GDLASITAQLEQWRDVSQEPPVWLDI------EITTDEYLHDIQRKIQAL------TESL 331 IT L ++ + + + I +I T+++L +Q ++ L Sbjct: 268 TFYREITKLLNDYQGRNNSFFLHVIIQMTNKQKINTNDWLQMLQEEVDLTSSTFVWVHKL 327 Query: 332 PVEVLLVRRSREQRERVLASQQ-RETLSELSVEEVFNRRLA-----------LEELDESQ 379 +E+ + +E LA ++ L E F + + LE+L E Sbjct: 328 SIELTNQSDLKNWQEHHLAGREIMNAFKTLQDEFAFYKSVESLYFESGVSRYLEDLSEQD 387 Query: 380 QQ-RLQHLFTTTLHTLAGEH 398 +Q L+ T L Sbjct: 388 RQLMLESALTELGVALKESE 407 >UniRef50_Q8TXI3 DNA double-strand break repair protein mre11 n=1 Tax=Methanopyrus kandleri RepID=MRE11_METKA Length = 451 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 63/299 (21%), Positives = 105/299 (35%), Gaps = 48/299 (16%) Query: 1 MRILHTSDWHLGQNFYS-KSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYA 59 MR+ H +D HLG + +SRE + L+E + VD +++AGD+F+ P + A Sbjct: 1 MRMAHVADVHLGHALMNLRSREEAVMETFERLMEEVRECSVDVLVIAGDLFEHARPKTEA 60 Query: 60 RTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRR- 118 L + L++ G +V AGNH+ I +V ++ + R Sbjct: 61 LYLAVEKLSELKEDGVEIVATAGNHEIRRRKGAVSPISVLERMGLVRHLYYSERRPERHR 120 Query: 119 ----DGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGD 174 + +L + + A Sbjct: 121 YTATFDGVRVTFHGLQYLPKNSFVE----------------------RAKVIRAKYRPDP 158 Query: 175 QPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPA-DYIALGHIHRA---QIIG 230 + +A H G ++ FP DY A+GH+H + I Sbjct: 159 EADVNVAIFHQALPGTIPDESE---------IVEPAYFPEGHDYYAMGHVHVPSREEKIH 209 Query: 231 GMEHVRYCGSPIPLSFDE------CGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLK 283 G Y GSP PL+F E K + LV F G L E + V ++ ++V++ Sbjct: 210 GSP-APYPGSPEPLTFLEVKDERGAHKRRGFFLVEFDRGGLVEYEFVEVEWSRELSVVE 267 >UniRef50_C6I002 Metallophosphoesterase n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6I002_9BACT Length = 416 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 79/409 (19%), Positives = 141/409 (34%), Gaps = 55/409 (13%) Query: 1 MRILHTSDWHLGQNFYSKSR---------EAEHQAFLDWLLETAQTHQVDAIIVAGDVFD 51 M+ LH +D HL + + + L++ A + V +++AGD++D Sbjct: 1 MKFLHAADIHLDSPLRNLALSNTEATDRIRRASRDAFTRLVDLALSEGVSLLVLAGDLYD 60 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA 111 +P R + L + G + V+ GNHD+ + + + A Sbjct: 61 HDTPNMQIALFLRRELSRLAEAGISVAVVLGNHDAGNRMTTLLSLPENTRIF----SSRA 116 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 P+ L + Q + D + + K Sbjct: 117 PETLILEECGVAV-----------------------TGQSLREGPVNDNLARDFPAPRK- 152 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG 231 IA H + G+ D + L + DY ALGHIH+ +I+ Sbjct: 153 ----GYFNIALLHTSLGGSPDHDVYAPCSLADLSS------RAYDYWALGHIHKGEIVSR 202 Query: 232 MEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITA 291 +V Y G+ E G K LV +GK+ S + + + V + L+ DL Sbjct: 203 DPYVVYPGNLQGRHARETG-PKGAVLVEVRDGKVVSCDLVPLDVVR-WHQLEVDL----G 256 Query: 292 QLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLAS 351 E R+ L + + R I L+ P+ +R S QR+ V + Sbjct: 257 GAETLREAGDRIRGVLSETLRQSGERPAVVRVI--LSGRTPLASGPLRGSGAQRDLVAET 314 Query: 352 QQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHEA 400 E+ VE+V R + +E + +++ F + + L + A Sbjct: 315 AGELLSGEIWVEKVVGRLVPPKEEESAEKGETGEEFFSIVSELMADERA 363 >UniRef50_C5SCL6 Metallophosphoesterase n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SCL6_CHRVI Length = 384 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 90/415 (21%), Positives = 144/415 (34%), Gaps = 49/415 (11%) Query: 1 MRILHTSDWHLGQNFYS----KSREAEHQAFLDWL---LETAQTHQVDAIIVAGDVFDTG 53 M+ LHT+DW LG+ F R QA LD L A+ + I+VAGD+FD+ Sbjct: 1 MKFLHTADWQLGKPFARIPDPDKRRRLQQARLDGLERLAAIARRAEARFILVAGDLFDSP 60 Query: 54 SPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ 113 SP AR+L + + +V + GNHD +A + Sbjct: 61 SP---ARSLVSATFHAIGAMRLPVVAIPGNHDFGGPGGPWEQAFVQQEMAALA-PNFSIL 116 Query: 114 ILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRG 173 R AV+ P P LR R + G I AD Sbjct: 117 TEERPLVLDEAVILPAP-LRQRHVAHDPTG------------WIGRACDALPAD------ 157 Query: 174 DQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPP--ADYIALGHIHRAQIIGG 231 P I H + G +D + T + P DYIALG H + I Sbjct: 158 ---RPWIVLAHGSVQGFGSADEEQGAT--TYNRLDLSRLPDGQIDYIALGDWHGLKSID- 211 Query: 232 MEHVRYCGSPIPLSF--DECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAV-LKGDLAS 288 + Y G+P F E + + LV + G VE + + + D S Sbjct: 212 -PRIWYSGTPEIDGFPKGEGHRPGHALLVEVARGVAPQVEAVATGAIRWERIGFHFDAES 270 Query: 289 ITAQLEQWRDV---SQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQR 345 AQLE+ D S L ++++ + + + ++ + ++ +R + + R Sbjct: 271 SLAQLERLFDDRLGSGAEGALLHLDLSGQLSIGE-RLALEQRLATWEARLIWLRVNDQVR 329 Query: 346 ERVLASQQR---ETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGE 397 E + + + V R LA +++ + L L+ A Sbjct: 330 ETPSEDEIERLTQRADDPLTARVARRLLAETASADAEIAAIARLALRELYQAANA 384 >UniRef50_A5GT58 DNA repair exonuclease n=1 Tax=Synechococcus sp. RCC307 RepID=A5GT58_SYNR3 Length = 392 Score = 135 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 90/421 (21%), Positives = 157/421 (37%), Gaps = 60/421 (14%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDW--------LLETAQTHQVDAIIVAGDVFDT 52 +R LHT+DW +G+ Y++ + +H+A L + Q Q+D ++VAGD+FD+ Sbjct: 8 VRFLHTADWQIGKP-YARVVDPDHRARLKQVRIAVIQRMALFVQRQQLDFVLVAGDLFDS 66 Query: 53 GSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNES-RDIMAFLNTTVVASAGHA 111 +P AR+ + + + Q ++V+ GNHD + + L+ V + Sbjct: 67 PAP---ARSEVAQALSAIGQIPAPVLVIPGNHDHGGPGSLWHQGWFQELSADVAPNL--- 120 Query: 112 PQILPRRDGTP--GAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADAC 169 QIL R GAV+ P P +R + + L + + Sbjct: 121 -QILLERQPVSLCGAVVLPCPLMRQTAVEDPLSWLTQLNTSEL----------------- 162 Query: 170 KLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPP--ADYIALGHIHRAQ 227 P I H G+ +S A D + + + P DYIALG H + Sbjct: 163 -----PDGPRIVLAH----GSVQSFAALDSQEASSNQLSLEQLPQGLCDYIALGDWHGLK 213 Query: 228 IIGGMEHVRYCGSPIPLSFDECGK--SKYVHLVTFSNGKLESVENLNVPVTQ-PMAVLKG 284 + + YCG P F S V LV G +V Q ++ Sbjct: 214 QVSA--NAWYCGCPEQDRFPRTADYASSQVLLVELERGCSPAVSIEPTGALQWHHITMRL 271 Query: 285 DLASITAQLEQWRD--VSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSR 342 + LE+ + Q L + + +++A SL +L ++ + Sbjct: 272 QGDADLELLERQVQQHLGQRSGEDLLLLELDGQLSLTGAARLEAWLTSLSSRLLRLKHRQ 331 Query: 343 EQRERVLASQQRETLSELSVEEVFNR---RLALEEL--DESQQQRLQHLFTTTLHTLAGE 397 R + + + L + + +F R L + L D +++ RL L L LA + Sbjct: 332 RVR-TLPSDAELAPLLDRPGDPLFARVVSSLKEQSLQQDNAEESRLAVLALRELQLLASQ 390 Query: 398 H 398 Sbjct: 391 E 391 >UniRef50_B8DIF5 Metallophosphoesterase n=4 Tax=Desulfovibrio vulgaris RepID=B8DIF5_DESVM Length = 513 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 64/298 (21%), Positives = 102/298 (34%), Gaps = 34/298 (11%) Query: 2 RILHTSDWHLGQNFYSKSRE-------AEHQAFL---DWLLETAQTHQVDAIIVAGDVFD 51 R +H +D HL F SR+ H+A + L++ + DA+++AGDV + Sbjct: 5 RFVHAADLHLDAAFAGVSRDLSPRLADRLHRATFTAWERLVDLCLAERPDALLIAGDVHN 64 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA 111 A+ L G + + GNHD + + + TV + Sbjct: 65 HEDGSLRAQVALRDGCARLADAGVRVFIAHGNHDPLT--SRVHSLHWPDGVTVFGPQVES 122 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 + RDG AV+ I R+ Q ++ + + Sbjct: 123 HAL--TRDGRVVAVVHGISHETDREGRNLAKRFARAATVQGMVHGLVQ----------DV 170 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG 231 P I H + TLD DY ALGHIH Q++ Sbjct: 171 DVPPGAPQIGVLHCNVGSTPGTRDAGRYAPCTLDDLTGAGL---DYWALGHIHLPQVLRT 227 Query: 232 MEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASI 289 HV Y GS L +E G + HLVT + E +P+A ++ + + Sbjct: 228 RPHVVYPGSTQGLHINEDG-PRGCHLVTVHDDGEVETE------FRPLAPVRWQVVEV 278 >UniRef50_A6U7V3 Metallophosphoesterase n=9 Tax=Alphaproteobacteria RepID=A6U7V3_SINMW Length = 425 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 61/352 (17%), Positives = 114/352 (32%), Gaps = 54/352 (15%) Query: 2 RILHTSDWHLGQNFYSKSREA---------EHQAFLDWLLETAQTHQVDAIIVAGDVFDT 52 R +HT+D HL S + ++ L +++ VDA+++AGD++D Sbjct: 4 RFVHTADLHLDSPLRSLALRNSELAGLVRSATRSALVRIVDLCVAESVDALLIAGDLYDG 63 Query: 53 GSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP 112 + L + G ++ GNHDS + +R++ + V + Sbjct: 64 SQTSMNTALFLAGELRRLDEAGIRTFIIRGNHDSQS--QVTRELALPPSVHVFSGRSRTV 121 Query: 113 QILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLR 172 +G + + F P H ++ + A Sbjct: 122 LAKTLANGRT-VHIHGVSFADP-----------------HAPESLLPQFHPPVA------ 157 Query: 173 GDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGM 232 I H + G++ D + L DY ALGH+H+ Q+ Sbjct: 158 ---GGINIGMLHTSLSGSAAHDPYAPCSVADLQRH------GFDYWALGHVHQRQVHCEK 208 Query: 233 EHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQ---------PMAVLK 283 ++ G P +E G K V +VTF +++ + +A Sbjct: 209 PYIVMAGMPQGRDINEAGM-KGVTIVTFDEDGPAALDERPISTAAFERFAVDVSGIADWH 267 Query: 284 GDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEV 335 L +++ L R + L + + L R+ L E V + Sbjct: 268 DMLDAVSRALAHIRKTVAADNLILRLTLKGSTPLAWRLRRDADLLEGEIVNI 319 >UniRef50_Q04FF3 DNA repair exonuclease n=2 Tax=Oenococcus oeni RepID=Q04FF3_OENOB Length = 413 Score = 134 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 54/276 (19%), Positives = 90/276 (32%), Gaps = 48/276 (17%) Query: 1 MRILHTSDWHLGQNFYSKSRE----AEHQA--------FLDWLLETAQTHQVDAIIVAGD 48 M+ +H +D HLG R+ E + +++ A VD ++ GD Sbjct: 10 MKFIHAADIHLGNPISGIDRKINLPEEVKKQIALATFTAFSNVIKLAVDRHVDFVLFPGD 69 Query: 49 VFDTGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASA 108 +FD+ +Y N+ NL++ G + GNHD + + D + N Sbjct: 70 LFDSSQQSAYLYNFLNQQFQNLKEAGIEAFISFGNHDFQSDVE--NDFIWPENVH----- 122 Query: 109 GHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADA 168 P + + + + ++ Sbjct: 123 -------------------AFPKSKAKTFFHDSWDGKRVAITGTSF--VVRNPRESLVPL 161 Query: 169 CKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQI 228 R I H + G S ++ +G L A DY ALGHIH Q+ Sbjct: 162 YPSRDQSATYQIGMYHGS-QGNSSANNYAPFSVGDLQAL------NYDYWALGHIHVRQV 214 Query: 229 IGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGK 264 + + Y G P L E G K V+ V+ N + Sbjct: 215 LSKNPAIVYSGDPQGLDLTETG-EKGVYFVSDENDQ 249 >UniRef50_C0FS04 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FS04_9FIRM Length = 154 Score = 134 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 32/120 (26%), Positives = 63/120 (52%), Gaps = 2/120 (1%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ H SD H+G+ + + AE + L ++ A+ + DA+++AGDV+DT P + A Sbjct: 18 MKFFHLSDLHIGKQLHHYNMIAEQRDILGKIVALAEREKPDAVLIAGDVYDTPVPSAEAV 77 Query: 61 TLYNRFVVNLQ--QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRR 118 ++++ F+ L + + ++AGNHDS ++ + DI+A + + R+ Sbjct: 78 SVFDEFLTALNDLEPEVTVCIIAGNHDSAKRIDFASDILAKHRVMIAGMPPLTREETIRK 137 >UniRef50_B9M471 Metallophosphoesterase n=8 Tax=Bacteria RepID=B9M471_GEOSF Length = 434 Score = 134 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 79/392 (20%), Positives = 148/392 (37%), Gaps = 57/392 (14%) Query: 2 RILHTSDWHLGQNFYSKS----REAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGS--P 55 + HT+D HLG+ + + + R + L + A + Q ++++GD+F TG P Sbjct: 3 KFHHTADIHLGKTYRTSAGTNLRYEDFFHTLTSIAIDAISSQARFVLISGDLFHTGQILP 62 Query: 56 PSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQIL 115 ++A+T+ + L+ G + + GNHD + + S M L+ G+ + Sbjct: 63 KTFAKTI--EILQPLKDAGIPCIAVEGNHDWIHRRD-SISWMEALS-----QMGYIKLLR 114 Query: 116 PRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQ-HLLAAITDYYQQHYADACKLRGD 174 P R G P D T G I+ + L I H C+ Sbjct: 115 PTRTENGGYRF------DPFDEETGSGGRIEIDGINIYGLGYIGAQAGAHVPRICEAVT- 167 Query: 175 QPLPIIATGHLTTVGASKSDAVRDIYIGTL---DAFPAQNFPPADYIALGHIHRAQIIG- 230 I H+ + IG + +A P DY+ALGH H+A + Sbjct: 168 -TNNNILLFHVGIW------TYSPVEIGNIKPEEALPLA--ECFDYVALGHGHKAYTVST 218 Query: 231 --GMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGD--- 285 G + GSP ++F E G K V +GK P + D Sbjct: 219 PDGRPYAFNPGSPERVNFGEEGYDKGYWAVKVEDGKYTPEFRTTAPRPMQSVTVSVDGAD 278 Query: 286 -----LASITAQL-EQWRDVSQEPPVWLDIEITTDEYLHDI-QRKIQALTESLPVEV-LL 337 + ++ +L ++ ++ ++P + L + + ++ + +++ L + + + Sbjct: 279 TAEHAMETLKTELADKLQNAGEKPLIQLKVTGRVQFHPFELGRERVRRLLDEVADPLHCE 338 Query: 338 VRRS---------REQRERVLASQQRETLSEL 360 ++ E+ R LA +R+ L EL Sbjct: 339 IKNHLSLITGSGIGEKEHRSLADIERDVLREL 370 >UniRef50_B1HVJ9 Putative uncharacterized protein n=3 Tax=Bacteria RepID=B1HVJ9_LYSSC Length = 404 Score = 134 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 62/349 (17%), Positives = 114/349 (32%), Gaps = 60/349 (17%) Query: 1 MRILHTSDWHLGQNFYSKSREAEH---------QAFLDWLLETAQTHQVDAIIVAGDVFD 51 +R H +D HL F EH D +++ A Q D +++ GD++D Sbjct: 4 IRFFHMADLHLDSPFKGLFGLPEHILKEIRSSTFDAFDKIIQKAIQEQPDFLLIVGDIYD 63 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA 111 + A+ + + L Q +++ GNHD + N + + Sbjct: 64 GENRSLQAQRKFQDAMEKLFQHNIPVIISYGNHDHLK--GTWTRFSLPSNVYELPAETSV 121 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 Q+ R + + + ++ D + Sbjct: 122 VQLKIR---GQQVCIYGFSYSE-------------------------RHLKESVIDTFPI 153 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG 231 D I H G+ SD +Y + Y ALGHIH+ Q++ Sbjct: 154 AQDSHAIHIGMLH----GSEASDTSHALYAPFTKQQLLE--KNYHYWALGHIHKRQLLHE 207 Query: 232 MEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMA-VLKGDL---- 286 + Y G+ E G K + VT S + E +P + + ++ D Sbjct: 208 NPPIVYPGNIQSRHRKEQG-IKGCYDVTLSQ---TACELDFIPTSAIVYTTIEVDCTNIV 263 Query: 287 --ASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPV 333 + + E+ V++ +E+ YL +I + +AL E V Sbjct: 264 HANELLKRCEEAIAVNRTSWGAAVVEL----YLKNIDEQTEALFEHATV 308 >UniRef50_B8D4A8 DNA double-strand break repair protein mre11 n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D4A8_DESK1 Length = 427 Score = 133 bits (335), Expect = 9e-30, Method: Composition-based stats. Identities = 84/420 (20%), Positives = 155/420 (36%), Gaps = 54/420 (12%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQ-AFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYA 59 M I+HT D HLG + +S A L L+E A + ++++GD FD Sbjct: 4 MMIIHTGDLHLGCSLSRESPLARFYIDVLKELVEKAIREKA-IVLISGDFFDHYDVSYSL 62 Query: 60 RTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 R++ L+ +VV+ GNHD+ + R ++ N + +I Sbjct: 63 MIEVARYLRQLRDNNIEVVVVPGNHDNARS---GRGVLDLFNEAGLIKLTRYEEI----- 114 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 G L P + + G+ ++ A + Y +++ K + + I Sbjct: 115 ---GGHLLLYP------LRINDYDFYGVPGFRN--QAESKYIKENRVKFVKKNNENNVII 163 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFP----PADYIALGHIH--RAQIIGGME 233 +A + G D R G +D + + Y+ALGHIH Q Sbjct: 164 LAHVSVEFAGFRPRDYNRQY--GMIDVVENELWRIMPSGIKYVALGHIHIPIPQERKFKS 221 Query: 234 HVRYCGSPIPLSFDE---------CGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKG 284 ++ Y G+PI ++ ++ G + +V G L VE + + + + K Sbjct: 222 NIAYPGAPIGMNIEDLRETALLERKGVRRRFLMVDLE-GDLPLVEAVELESSPKIMYEKA 280 Query: 285 DLASITAQLEQWRDVSQEPPVW------LDIEITTDEYLHDIQRKIQALTESLPVEVLLV 338 SI + + ++ + +E DE +++++ IQ + S V L Sbjct: 281 SYISIDELRKHISSIVKDGADYHGFIFEAKVEGLKDEQVNELRSFIQEIQRSYNKLVYLR 340 Query: 339 RRSREQRERVLASQQRETLSE--LSVEEV-------FNRRLALEELDESQQQRLQHLFTT 389 E V A + LS+EE+ + +L L E ++ L+ L+ Sbjct: 341 LPEVSGVENVFAGYDIHQVDTGSLSIEEIEEKILNEYAGKLGLRIPIEKIKEILRLLYEE 400 >UniRef50_D1YYH3 Putative DNA double-strand break repair protein Mre11 n=1 Tax=Methanocella paludicola SANAE RepID=D1YYH3_METPS Length = 446 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 75/425 (17%), Positives = 132/425 (31%), Gaps = 54/425 (12%) Query: 1 MRILHTSDWHLGQNFYS-KSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYA 59 M +H +D HLG Y + R + ++E A +V+ ++++GD+FD S + Sbjct: 1 MNFIHMADMHLGYRQYGLEERFLDFGYTFKQVVEYAIAQKVEFVLISGDLFDKRSINAPT 60 Query: 60 RTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 + L+ G + + GNHD L + + L +++ D Sbjct: 61 YIQAVHVLSLLKNAGIPCIAIEGNHDR-RFLKDGMSWLDSL------EWEGLLKVIKNYD 113 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 G F+ G G + + A P Sbjct: 114 GD-----LMGGFVDAGKTRIFGLGFAGSMTSAAIPRIKEEI-------AAINAQSPPERT 161 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPA-DYIALGHIHRAQIIGGMEHVRYC 238 I H G K +G + A DY+ALGH H I + Sbjct: 162 IFMLHAGVQGKMKYG-----VVGEVTYEDLCQLKGAVDYLALGHYHSNYEID--DWAYNP 214 Query: 239 GSPIPLSFDECGKSKYVHLV-TFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWR 297 GSP S E + K ++ V + +P+ KG + + E Sbjct: 215 GSPDTCSIVEAYEKKGIYHVTDVGAKLVPMSTRKFIPLRIKADGHKGFESLLNDIRESLI 274 Query: 298 DVSQEPPVWLDIEITT----DEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQ 353 + + + I D+ ++ ++A+ E VR E +AS Sbjct: 275 KYGKYDGPIVHVIIEGTLGFDKSHINVDTILEAVKEITSALYADVRFDLVNDEFRIASID 334 Query: 354 RETLSELSVE-EVFNR--------------------RLALEELDESQQQRLQHLFTTTLH 392 + L S+E EVF + + + + ++ L LF H Sbjct: 335 ADALDRASIEREVFRKLARFDSVLAGNCDFFAASLSEVKDMAVKGADEKTLDSLFRKIYH 394 Query: 393 TLAGE 397 + Sbjct: 395 EVKNA 399 >UniRef50_A6BZ13 Putative exonuclease n=1 Tax=Planctomyces maris DSM 8797 RepID=A6BZ13_9PLAN Length = 417 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 68/356 (19%), Positives = 119/356 (33%), Gaps = 58/356 (16%) Query: 2 RILHTSDWHLGQNFYSKSREA---------EHQAFLDWLLETAQTHQVDAIIVAGDVFDT 52 R +H +D HL + + L L++ A V +++AGD++D Sbjct: 3 RFIHAADIHLDSPLKGLEQYEGAPVEIIRTAPREALVNLVDLAIDESVAFVLIAGDLYDG 62 Query: 53 GSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP 112 + R L+ G L +++GNHD+ + R + N T + Sbjct: 63 DWRDFNTGLFFIRQAQRLRDAGIPLYLISGNHDAANRIT--RSLQLPENVTFFSPTQAET 120 Query: 113 QILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLR 172 +++P D I Q AA+ D Q+Y A Sbjct: 121 KLIPELD-------------------------VAIHGQSFATAAVYDNLAQNYPAA---- 151 Query: 173 GDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGM 232 I H G S+ TL+ N DY ALGHIH+ +I+ Sbjct: 152 -HSGCFNIGVLHTCATG---SEGHERYAPCTLEDLKIHN---YDYWALGHIHKREILCED 204 Query: 233 EHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQ---------PMAVLK 283 + + G+ E G K LVT + + E + + + L+ Sbjct: 205 PLIAFSGNIQGRHIRETG-PKGCLLVTVDDERRLRTEFRALDILRWERAIVDLDGARSLE 263 Query: 284 GDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHD-IQRKIQALTESLPVEVLLV 338 L ++ +E ++ + L I++ H+ + + L + V L V Sbjct: 264 EALERVSTTMETLFGQAEGRTLALRIDLQGACPAHNELLARRHQLIAEIRVRALDV 319 >UniRef50_C6A1X6 DNA double-strand break repair Mre11 nuclease n=1 Tax=Thermococcus sibiricus MM 739 RepID=C6A1X6_THESM Length = 384 Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 71/410 (17%), Positives = 136/410 (33%), Gaps = 57/410 (13%) Query: 1 MRILHTSDWHLGQNFYS-KSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYA 59 MRI H +D HLG Y+ + RE + + +E +VD + AGD FD+ PP A Sbjct: 1 MRIAHIADTHLGYRQYNLEERENDIYEAFNEAVEKMIEERVDVFVHAGDFFDSPRPPIKA 60 Query: 60 RTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 + + L++ ++ + G HD+ ++ L+ ++ +L Sbjct: 61 LYVAKEGIRKLREHNIKILTVLGEHDTPRRKAMPPQML--LDLPILGIGKVQKVVLN--- 115 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 G I L+ R + + L+ + D+ + Y Sbjct: 116 ---GVAFFGISNLKGRRVDLLKEELSKV-----------DHLAKEY-----------NKS 150 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIG-GMEHVRYC 238 + H + ++ + Y A GHIH + G ++ Y Sbjct: 151 VLIAHQAIKKFLPFEGAYELEM-------VDLPREISYYAFGHIHSRTVESFGRSYLAYS 203 Query: 239 GSPIPLSFDEC----GKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGD-----LASI 289 GS + E K K ++V G L + +++ +P + + + Sbjct: 204 GSTEIMRKSEISSWKDKGKGFYIVDLD-GDLPEIHKIDLESIRPQFEVSYTQEKDIINEL 262 Query: 290 TAQLEQWRDVSQEPPVWLDIEITTDEYL---HDIQRKIQALTESL-PVEVLLVRRSREQR 345 A L+ ++I + ++ KI+ + E L P +L Sbjct: 263 GAFLQDIIGEGTSVTKAPILKINVQGDIIRKAELIEKIREILEKLVPYRILRYDIHFIGT 322 Query: 346 E--RVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHT 393 L + + +L +F L E+L + HL+ L Sbjct: 323 NVPTNLTPNNIKEIGDL--RRLFVEYLGDEKLGNLAFELYSHLWINDLEG 370 >UniRef50_A1S0I8 Metallophosphoesterase n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1S0I8_THEPD Length = 391 Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 74/409 (18%), Positives = 125/409 (30%), Gaps = 40/409 (9%) Query: 1 MRILHTSDWHLGQNF-----YSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSP 55 +RI+HT+D HL F + R + +++ A + +V+GD+FD+ +P Sbjct: 4 LRIVHTADNHLDPKFTFLGPKVRDRREDFLNAFRRVVDFAVEAKPHLFLVSGDLFDSVNP 63 Query: 56 PSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQIL 115 + R R L G + V+AGNHD +L E + + + A Sbjct: 64 RNPVRVQVIRAFRRLYSEGVRVYVIAGNHDMPRSLEEGLSPLKEVEASGYARFFEKTSEF 123 Query: 116 PRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQ 175 + + + + ++ + Y GD Sbjct: 124 EVDHFEVNGFDVAVAGISYNPEV-----------------GLDEHPLRKYNARVPREGD- 165 Query: 176 PLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQII--GGME 233 + ++ H G A R I D Y ALGH+H I G Sbjct: 166 -IEVVLM-HYNFAGVEVPGAWRAPRITRED-----IPDNCVYAALGHVHSRVTIPLGNGG 218 Query: 234 HVRYCGSPIPLSFDECGKS-KYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQ 292 Y GS SF E G K V E VP T+P+ ++ + Sbjct: 219 VAAYPGSTERRSFIEEGDGAKGFLYVKVHGDGRVETEFKEVP-TRPIKTVRVQVPPSAED 277 Query: 293 LEQWR---DVSQEPPVWLDIEITTDEYLHDIQR-KIQALTESLPVEVLLVRRSREQRERV 348 + +P + L + + L + R L ++ V + Sbjct: 278 PVGYVLSSLPPPDPRLLLRVLVEGSIPLARLTRYSRAELLKNAEKRFFHVVVEDSELRCA 337 Query: 349 LASQQRETLSELSVEEVFNRRLAL--EELDESQQQRLQHLFTTTLHTLA 395 A + + S E F + E E + L + L Sbjct: 338 YAEKPSVAVESKSPIEAFREEVEGRLREAPEEDRIILLKALERGVKALE 386 >UniRef50_C2EVZ4 DNA repair exonuclease n=1 Tax=Lactobacillus vaginalis ATCC 49540 RepID=C2EVZ4_9LACO Length = 401 Score = 132 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 51/284 (17%), Positives = 91/284 (32%), Gaps = 45/284 (15%) Query: 1 MRILHTSDWHLGQNFYSKSREAEH---------QAFLDWLLETAQTHQVDAIIVAGDVFD 51 M+ +HT+D HL F + +++ A QVD I++ GD++D Sbjct: 1 MKFIHTADLHLDSPFRGLDEMPAQIWQRVHQSTFTAFERIVDAAINQQVDFILIVGDIYD 60 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA 111 + A + R L + + + GNHD + + N V + Sbjct: 61 RDHHSAEAEDFFVRQCQRLAKQQIPVYLSYGNHDYQPVTEQIDSL--PNNVHVFGNQVET 118 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 + D T + + + + + E + + Q+ D Sbjct: 119 KTLTLADDQT--VAITGFSYGKRWLVEDQVSKFPEKETADWQIGMLHGAISQNNPD-QDH 175 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG 231 LP + DY ALGHIH+ Q++ Sbjct: 176 YAPFTLPELLQ------------------------------KRYDYWALGHIHKHQVLNE 205 Query: 232 MEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPV 275 V Y G+P +E G+ +LV ++ KL + P+ Sbjct: 206 EPLVVYPGNPQGRHKNEDGQ-HGYYLVQSNSDKLTAEFKPVAPI 248 >UniRef50_Q7VCN7 DNA repair exonuclease n=1 Tax=Prochlorococcus marinus RepID=Q7VCN7_PROMA Length = 394 Score = 132 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 73/386 (18%), Positives = 125/386 (32%), Gaps = 67/386 (17%) Query: 2 RILHTSDWHLGQNF-------YSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGS 54 R +HT+DW +G+ + E + + + + +++AGD+FD+ + Sbjct: 3 RFIHTADWQIGKPYLQIKDEQKRFKLRQERLNVIGRIRDKTREVGSQFVLIAGDLFDSPT 62 Query: 55 PPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQI 114 P + T + + + V+ GNHD A N + AP + Sbjct: 63 PSTSTVT---EVLETIGEMQVPTFVIPGNHDHGALGTVW-----HSNDFIKHQKQLAPNL 114 Query: 115 LPRRDGTP----GAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACK 170 + P AV+ P P LR + L ++ Sbjct: 115 KILLNSQPVEIEEAVIFPCPLLRNKSNADPTLWLKTLDWNSVS----------------- 157 Query: 171 LRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNF--------PPADYIALGH 222 P I H G + RD + A N DYIALG Sbjct: 158 ----SLKPRIILAH----GGVHEFSGRDYILDEEAQPNANNIINLKEVPDKEIDYIALGD 209 Query: 223 IHRAQIIGGMEHVRYCGSPIPLSFD--ECGKSKYVHLVTFSNGKLESVENLNVPVTQPMA 280 H + + Y G+P P F+ E + + V S V+ + Q Sbjct: 210 WHNLKQVSQK--AWYSGTPEPDRFNQGENNQRGQILEVDVSRNGAAQVKAIPTGRLQWHN 267 Query: 281 V-----LKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEV 335 + DL ++E + L +EI+ + L RK + L L ++ Sbjct: 268 MNFKFHSDDDLNRFEREIEAL-TAGRVARDLLRVEISGELSLAG-HRKYELLKTDLENKL 325 Query: 336 LLVRRSREQRERVLASQQRETLSELS 361 L +R E + + + L EL+ Sbjct: 326 LRLRIKGECHQTPKSDE----LEELT 347 >UniRef50_C0GNG3 Metallophosphoesterase n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GNG3_9DELT Length = 423 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 52/284 (18%), Positives = 94/284 (33%), Gaps = 48/284 (16%) Query: 3 ILHTSDWHLGQNFYSKSREA---------EHQAFLDWLLETAQTHQVDAIIVAGDVFDTG 53 +H +D HL + SR + LD L+ H++ +++AGD++D Sbjct: 4 FIHAADIHLDSPLHGLSRYEGAPAREIRQATRKALDNLVNYVLEHRIPLLLIAGDLYDGD 63 Query: 54 SPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ 113 P ++ + L++ G + ++ GNHD+ + +S + Sbjct: 64 CPDFQTPLHFSAQMSRLREAGTRVALIRGNHDAQNRMTKSLRL----------------- 106 Query: 114 ILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRG 173 + RP G + Q + A+ + +Y D Sbjct: 107 ---------PDNVFTFSAARPATWKLEDLG-TAVHGQSYDREAVLENLALNYPDPV---- 152 Query: 174 DQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGME 233 + I H + G + + L A DY ALGHIHR +I+ Sbjct: 153 -PGMFNIGLLHTSLSGTPEHSGYAPCTLNQLLA------KGYDYWALGHIHRHEILHRDP 205 Query: 234 HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQ 277 V + G E G K V ++E + + V + Sbjct: 206 PVIFSGCIQGRHIREPG-GKGCMRVDVDPSGRINIERVELDVLR 248 >UniRef50_A1VMU8 Metallophosphoesterase n=2 Tax=Comamonadaceae RepID=A1VMU8_POLNA Length = 429 Score = 131 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 62/310 (20%), Positives = 106/310 (34%), Gaps = 50/310 (16%) Query: 1 MRILHTSDWHLGQNFYSKSREA---------EHQAFLDWLLETAQTHQVDAIIVAGDVFD 51 MR +HT+D H+ SR + L+ L+E A +VD +++AGD++D Sbjct: 1 MRFIHTADLHIDSPLRGLSRYQGAPLERLRSATRRALERLVELAVDEKVDFVLMAGDLYD 60 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA 111 + N +V L+ G + ++ GNHD+ + + R I N V +S Sbjct: 61 RDWQDFHTGLFVNAQLVTLKNAGIQVFIVQGNHDAQSHMT--RQIPWPDNVKVFSSRT-- 116 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 L+ + E ++L+ + Sbjct: 117 ---------------AETAHLKALGVAIHGHSFPNREVPENLVPGYPPALPGCF------ 155 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG 231 I H + G D + L A DY ALGH+H Q++ Sbjct: 156 -------NIGLLHTSLTGTDGHDTYAPATLSDLKA------KGYDYWALGHVHARQVVCE 202 Query: 232 MEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITA 291 V + G+ E G K LVT G + + + V + ++ D+ + Sbjct: 203 APRVVFPGNLQGRHARETG-PKGCELVTVE-GTAITARFVPLDVVR-WHQVEIDMQPVLQ 259 Query: 292 QLEQWRDVSQ 301 + R V Q Sbjct: 260 LDDLRRQVVQ 269 >UniRef50_D1BQT8 Metallophosphoesterase n=3 Tax=Veillonella RepID=D1BQT8_VEIPT Length = 423 Score = 131 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 62/337 (18%), Positives = 122/337 (36%), Gaps = 52/337 (15%) Query: 2 RILHTSDWHLGQNF-------YSKSRE--AEHQAFLDWLLETAQTHQVDAIIVAGDVFDT 52 R +H D HLG F + R LD +++TA T V A+++AGD++++ Sbjct: 5 RFIHCGDLHLGAPFQYATGISNAVDRAVSEATYVALDKIIDTAITEHVHAVVIAGDIYNS 64 Query: 53 GSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP 112 A+ + R + L + + ++ GNHD + + N + +S Sbjct: 65 EDHNLEAQVRFVRAMYRLAEHRIDVYMVQGNHDPAE--SWRAQLQMPDNVHIFSSEQ--- 119 Query: 113 QILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLR 172 ++ +I + + G+ +D Y + Y Sbjct: 120 -------------------VQRFPLIVNNIEIGGVYGISCGHGNESDNYARQY-----RA 155 Query: 173 GDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGM 232 ++ +A H T + S+ + + DY ALGHIH++Q++ Sbjct: 156 FERDEFSLAVMHSTVGSSVGSE---NHNVTGPCNLTDLTEAAMDYWALGHIHKSQVLSEE 212 Query: 233 EHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLA----- 287 V Y G+ L E G K +LV+ S+ + ++ +K D+A Sbjct: 213 PLVVYAGNSQGLHRKEHG-PKGCYLVSVSHNGHCDLRFIDT-CAVRFEEIKIDIAGMQNE 270 Query: 288 ----SITAQLEQWRDVSQEPPVWLDIEITTDEYLHDI 320 I + ++ + + L + ++ LH + Sbjct: 271 TDFLEILRRKKENLRKQHKKNILLSLVLSGTGPLHRL 307 >UniRef50_C1P8K4 Metallophosphoesterase n=1 Tax=Bacillus coagulans 36D1 RepID=C1P8K4_BACCO Length = 409 Score = 131 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 69/408 (16%), Positives = 130/408 (31%), Gaps = 60/408 (14%) Query: 1 MRILHTSDWHLGQNFYSKSRE---------AEHQAFLDWLLETAQTHQVDAIIVAGDVFD 51 +R +H +D HL F + L + + D +++ GD++D Sbjct: 4 IRFVHAADLHLDSPFAGLRKLPPALFERVKESTFRAFKNLCDLTIEKEADFLLICGDLYD 63 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA 111 A+ + LQ+ G + VL GNHD ++ + N + + A Sbjct: 64 GEDRSLKAQVRLKKQFERLQEAGISVFVLHGNHDHLS--GSWTKLDMPANVRIFSERVEA 121 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 + + + ++H+L TD Y+ Sbjct: 122 KSFTAKN--GSKVHVYGFSY-----------------PKRHVLENKTDEYR--------- 153 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG 231 + I H G +K + A DY ALGHIH+ QI+ Sbjct: 154 KTGDADFHIGMLHGYLEGGTKMHQPYAPF-----ALQDLLEKGMDYWALGHIHKQQILHT 208 Query: 232 MEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKG----DLA 287 ++ Y G+ + E G K + + + + D Sbjct: 209 HPYIIYPGNIQGRNRKETG-PKGCMVTEMDPLGTHTAFYETADILWEKRTVSVKGANDFN 267 Query: 288 SITAQLEQWRDVSQEPP--VWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQR 345 + + ++ V+L ++I + L D +AL + E++ V + E+ Sbjct: 268 RLYTVCRNALEEERKEAQGVFLQLDIKDPDLLDD-----EALGKVKNGELMEVLQEGEEA 322 Query: 346 ERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHT 393 +R R TL E+ F + + ++ L L TT+ Sbjct: 323 DRNFVWVHRITL----PEDAFISARDDGFILQEMKKTLAQLEETTVDE 366 >UniRef50_A4YET4 Metallophosphoesterase n=1 Tax=Metallosphaera sedula DSM 5348 RepID=A4YET4_METS5 Length = 379 Score = 131 bits (328), Expect = 6e-29, Method: Composition-based stats. Identities = 74/396 (18%), Positives = 144/396 (36%), Gaps = 51/396 (12%) Query: 3 ILHTSDWHLG-QNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYART 61 ILH SD HLG + + SRE + L++ A V AI+ +GD+FD P + + Sbjct: 2 ILHISDTHLGSRRYNRDSREQDVYDVFSQLIDLAIREHVRAIVHSGDLFDVYKPGNKSLK 61 Query: 62 LYNRFVVNLQQTGCHLVVLAGNHDSVATLNE---SRDIMAFLNTTVVASAGHAPQILPRR 118 + V L+ G + + G+HD+ +E R + L + P+ + Sbjct: 62 FFVDKVKLLRDKGIDFINIPGDHDTPKVRDEIYTQRLLGESLGLIEMLMGDQDPRFVEID 121 Query: 119 DGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLP 178 DG + I +++ ++ + + + Sbjct: 122 DGGIRIRVYGI-------------------------RSMSTVFRDNLLNLLGSLKPEGER 156 Query: 179 IIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRA--QIIGGMEHVR 236 + H D + IG+L Y A GH+H +++ + Sbjct: 157 NVLMLHQGFREMLPYDNAWQLEIGSLP-------KGFQYYACGHLHSRDVRVLPWGGILA 209 Query: 237 YCGSPIPLSFDE----CGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQ 292 GSP + +E K +LV S + + LNV V +P V++ D AS+ Sbjct: 210 VAGSPEIIREEEIEGWRKNGKGGYLVDLSK-REAEIHPLNVDV-RPQEVVRIDTASVDQD 267 Query: 293 LEQWR-DVSQEPPVWLDIEITTDEYLHD-IQRKIQALTESLPVEVLLVRRSREQRERVLA 350 ++ R +S L + + D +++ L+E + + + + R + Sbjct: 268 IDNIRKKLSGGRKPILHVILEGDSSKRSYAMKRLSQLSEIAEFYRIYKDETTDSQLREVK 327 Query: 351 SQQRETLSELSVEEVFNRRLALEELDESQQQRLQHL 386 + T+SEL E L + ++ + + + + Sbjct: 328 ASNNGTISELIAE-----YLRKQGYNDEEVKLILEV 358 >UniRef50_A3X5K0 Exonuclease SbcD n=4 Tax=Rhodobacteraceae RepID=A3X5K0_9RHOB Length = 381 Score = 131 bits (328), Expect = 7e-29, Method: Composition-based stats. Identities = 72/357 (20%), Positives = 128/357 (35%), Gaps = 57/357 (15%) Query: 2 RILHTSDWHLGQNFYSK------SREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSP 55 R LH+SD HLG+ F + Q + L AQ H+ +++AGD+FDT +P Sbjct: 5 RFLHSSDLHLGKRFGQMPEEVRADLQQARQQVVSTLAGLAQEHEAKHVLIAGDMFDTETP 64 Query: 56 PSYARTLYNRFVVNL-QQTGCHLVVLAGNHDS--VATLNESRDIMAFLNTTVVASAGHAP 112 + + + + + TG ++ GNHDS TL A NT ++ P Sbjct: 65 ST---RVLRQALAAMGAVTGLQWWIIPGNHDSAAAETLWAEMGDHASENTHLLMQ----P 117 Query: 113 QILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLR 172 + + PG L P P + + +T + + A LR Sbjct: 118 EPVEM---APGVHLLPAPC-----------------RHRFAGEDLTRWMDGYETPAGDLR 157 Query: 173 GDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGM 232 +A G + G+ S I A A+ DY+ALG H A + Sbjct: 158 IG-----LAHGGVLDFGSDASGGE---VISPNRASSARL----DYLALGDWHGAFTLN-- 203 Query: 233 EHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVT----QPMAVLKGDLAS 288 E RY G+P F G+ + + + G+ V + +P+ + Sbjct: 204 ERSRYSGTPEADRFKHAGRGQCLLVELTVAGQPPKVTPIESGAYHWQDRPLQLSPTS--D 261 Query: 289 ITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQR-KIQALTESLPVEVLLVRRSREQ 344 + QL++ + + + + ++ QR ++ + E + + Sbjct: 262 VATQLQEVLPAKRADWNRHLLRLRVEGWVTAPQRLALEEAIAKVAPEFCHFALEKTE 318 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0AG77 Nuclease sbcCD subunit D n=173 Tax=Proteobacteri... 414 e-114 UniRef50_D2T4P9 Exonuclease SbcD n=3 Tax=Erwinia RepID=D2T4P9_ERWPY 364 4e-99 UniRef50_D0ZEX0 Nuclease SbcCD, D subunit n=18 Tax=Proteobacteri... 356 9e-97 UniRef50_C7BK94 Nuclease sbccd subunit d n=1 Tax=Photorhabdus as... 355 2e-96 UniRef50_A6VXU9 Nuclease SbcCD, D subunit n=2 Tax=Marinomonas Re... 324 4e-87 UniRef50_Q2FMB7 Exodeoxyribonuclease I subunit D n=2 Tax=cellula... 322 1e-86 UniRef50_Q2LRF1 Exonuclease n=8 Tax=Bacteria RepID=Q2LRF1_SYNAS 320 5e-86 UniRef50_A1SUG4 Exodeoxyribonuclease I subunit D n=2 Tax=Psychro... 318 2e-85 UniRef50_A9BQD1 Nuclease SbcCD, D subunit n=5 Tax=Burkholderiale... 316 8e-85 UniRef50_Q3JD79 Exodeoxyribonuclease I subunit D n=11 Tax=Bacter... 313 1e-83 UniRef50_Q480G5 Exonuclease SbcD n=1 Tax=Colwellia psychrerythra... 310 7e-83 UniRef50_A4BZB7 Exonuclease SbcD n=2 Tax=Flavobacteriaceae RepID... 310 8e-83 UniRef50_B4RWA2 Exonuclease SbcD n=3 Tax=Alteromonadales RepID=B... 308 3e-82 UniRef50_B3EQD7 Nuclease SbcCD, D subunit n=1 Tax=Chlorobium pha... 307 4e-82 UniRef50_C1TLY0 Exonuclease SbcD n=1 Tax=Dethiosulfovibrio pepti... 302 1e-80 UniRef50_C7HA25 Exonuclease SbcD n=4 Tax=Clostridiales RepID=C7H... 293 8e-78 UniRef50_B8KMM7 Nuclease SbcCD, D subunit n=1 Tax=gamma proteoba... 290 4e-77 UniRef50_D1Y745 Nuclease SbcCD, D subunit n=1 Tax=Pyramidobacter... 290 5e-77 UniRef50_C8NB09 Nuclease sbcCD subunit D (Fragment) n=1 Tax=Card... 290 6e-77 UniRef50_A0AJ98 SbcD protein n=27 Tax=Bacillales RepID=A0AJ98_LISW6 289 1e-76 UniRef50_Q0HTQ0 Exodeoxyribonuclease I subunit D n=26 Tax=Gammap... 289 1e-76 UniRef50_A8FTM6 Nuclease SbcCD, D subunit n=25 Tax=Gammaproteoba... 288 2e-76 UniRef50_A9KNM2 Nuclease SbcCD, D subunit n=12 Tax=Bacteria RepI... 288 2e-76 UniRef50_A7VIT3 Putative uncharacterized protein n=1 Tax=Clostri... 288 3e-76 UniRef50_C9LQV4 Putative exonuclease SbcD n=1 Tax=Dialister invi... 287 4e-76 UniRef50_A3XL99 Exonuclease SbcD n=1 Tax=Leeuwenhoekiella blande... 287 6e-76 UniRef50_UPI0000E0E5D5 exonuclease subunit SbcD n=1 Tax=Glacieco... 287 7e-76 UniRef50_Q1VZW8 Exonuclease SbcD n=1 Tax=Psychroflexus torquis A... 286 1e-75 UniRef50_B8I3W2 Nuclease SbcCD, D subunit n=5 Tax=Clostridium Re... 285 2e-75 UniRef50_Q0K4S8 DNA repair exonuclease, SbcD n=6 Tax=Bacteria Re... 284 4e-75 UniRef50_A9BEV6 Nuclease SbcCD, D subunit n=1 Tax=Petrotoga mobi... 283 6e-75 UniRef50_C9M6Q6 Nuclease SbcCD, D subunit n=1 Tax=Jonquetella an... 283 9e-75 UniRef50_B0TDB7 Exonuclease sbcd n=1 Tax=Heliobacterium modestic... 282 2e-74 UniRef50_D2NSE3 DNA repair exonuclease n=1 Tax=Rothia mucilagino... 280 5e-74 UniRef50_D2RLP4 Nuclease SbcCD, D subunit n=2 Tax=Acidaminococcu... 280 7e-74 UniRef50_C4V2E2 Exonuclease SbcD n=1 Tax=Selenomonas flueggei AT... 280 9e-74 UniRef50_A3WLK0 Exonuclease SbcD, putative n=1 Tax=Idiomarina ba... 279 1e-73 UniRef50_A7VZC9 Putative uncharacterized protein n=1 Tax=Clostri... 278 2e-73 UniRef50_A5EW10 Exonuclease SbcD n=1 Tax=Dichelobacter nodosus V... 278 2e-73 UniRef50_UPI0001C366D6 nuclease SbcCD, D subunit n=1 Tax=Clostri... 278 3e-73 UniRef50_B5I7A7 Exonuclease n=3 Tax=Actinomycetales RepID=B5I7A7... 277 4e-73 UniRef50_A0LM47 Exodeoxyribonuclease I subunit D n=1 Tax=Syntrop... 276 8e-73 UniRef50_C6R472 Exodeoxyribonuclease I subunit D n=1 Tax=Rothia ... 276 1e-72 UniRef50_C1I2I4 Nuclease SbcCD n=1 Tax=Clostridium sp. 7_2_43FAA... 275 3e-72 UniRef50_C5NXT6 Nuclease sbcCD subunit D n=1 Tax=Gemella haemoly... 273 5e-72 UniRef50_UPI000178998B nuclease SbcCD, D subunit n=1 Tax=Geobaci... 273 1e-71 UniRef50_A1SK69 Exodeoxyribonuclease I subunit D n=2 Tax=Actinom... 272 1e-71 UniRef50_Q3ICS5 Exonuclease sbcCD subunit D n=2 Tax=Alteromonada... 272 1e-71 UniRef50_C7MH54 Exodeoxyribonuclease I subunit D n=3 Tax=Microco... 272 1e-71 UniRef50_B7AP64 Putative uncharacterized protein n=1 Tax=Bactero... 272 2e-71 UniRef50_C3NXC1 Exonuclease SbcD n=22 Tax=Vibrio RepID=C3NXC1_VIBCJ 272 2e-71 UniRef50_A7HCA1 Nuclease SbcCD, D subunit n=1 Tax=Anaeromyxobact... 271 3e-71 UniRef50_A4VHU4 Exonuclease SbcD n=22 Tax=Gammaproteobacteria Re... 271 3e-71 UniRef50_Q6GH61 Nuclease sbcCD subunit D n=52 Tax=Staphylococcus... 270 5e-71 UniRef50_A3YYZ0 Putative exonuclease n=1 Tax=Synechococcus sp. W... 270 7e-71 UniRef50_C7N5B0 Exonuclease SbcD n=1 Tax=Slackia heliotrinireduc... 269 2e-70 UniRef50_C7PNA9 Nuclease SbcCD, D subunit n=1 Tax=Chitinophaga p... 266 1e-69 UniRef50_A6BHS2 Putative uncharacterized protein n=5 Tax=Clostri... 265 2e-69 UniRef50_D1PQD5 Exonuclease SbcD n=1 Tax=Subdoligranulum variabi... 265 3e-69 UniRef50_B0MBW6 Putative uncharacterized protein n=1 Tax=Anaeros... 265 3e-69 UniRef50_A5N4G1 Predicted exonuclease, sbcD related n=45 Tax=Clo... 264 3e-69 UniRef50_C7TAC2 Exonuclease n=15 Tax=Lactobacillus RepID=C7TAC2_... 264 3e-69 UniRef50_C8P3T7 Exonuclease n=1 Tax=Erysipelothrix rhusiopathiae... 264 4e-69 UniRef50_Q1DDQ4 Nuclease SbcCD, D subunit n=3 Tax=Myxococcales R... 263 6e-69 UniRef50_C6D8R4 Nuclease SbcCD, D subunit n=81 Tax=Bacillales Re... 263 7e-69 UniRef50_C2EEA5 Exonuclease n=1 Tax=Lactobacillus ruminis ATCC 2... 263 9e-69 UniRef50_Q03P49 DNA repair exonuclease n=46 Tax=Lactobacillales ... 262 1e-68 UniRef50_B3CEC9 Putative uncharacterized protein n=4 Tax=Bactero... 262 1e-68 UniRef50_B1YES6 Nuclease SbcCD, D subunit n=1 Tax=Exiguobacteriu... 262 2e-68 UniRef50_C5CAA0 Exodeoxyribonuclease I subunit D n=4 Tax=Microco... 262 2e-68 UniRef50_C0VZX2 DsDNA exonuclease subunit n=1 Tax=Actinomyces co... 261 2e-68 UniRef50_A6KXN3 Putative exonuclease n=5 Tax=Bacteroides RepID=A... 261 3e-68 UniRef50_A8U5M2 Exonuclease sbcD n=1 Tax=Carnobacterium sp. AT7 ... 261 4e-68 UniRef50_D1VPG1 Nuclease SbcCD, D subunit n=1 Tax=Frankia sp. Eu... 261 4e-68 UniRef50_A7BEB8 Putative uncharacterized protein n=2 Tax=Actinom... 260 6e-68 UniRef50_B0NZF1 Putative uncharacterized protein n=1 Tax=Clostri... 259 1e-67 UniRef50_D0L9F6 Nuclease SbcCD, D subunit n=5 Tax=Actinomycetale... 259 1e-67 UniRef50_D2MLP9 Exonuclease SbcCD, D subunit n=1 Tax=Bulleidia e... 259 2e-67 UniRef50_C8P7X3 Exonuclease SbcD n=1 Tax=Lactobacillus antri DSM... 258 2e-67 UniRef50_C3RMV8 Exonuclease sbcD n=3 Tax=Bacteria RepID=C3RMV8_9... 258 3e-67 UniRef50_B5IJR3 Exonuclease n=1 Tax=Cyanobium sp. PCC 7001 RepID... 258 3e-67 UniRef50_Q49XE0 Nuclease sbcCD subunit D n=12 Tax=Staphylococcus... 257 5e-67 UniRef50_Q2JDN8 Exodeoxyribonuclease I subunit D n=24 Tax=Actino... 257 5e-67 UniRef50_P23479 Nuclease sbcCD subunit D n=16 Tax=Bacillales Rep... 256 1e-66 UniRef50_C0EE10 Putative uncharacterized protein n=1 Tax=Clostri... 255 2e-66 UniRef50_UPI00019735BC nuclease SbcCD, D subunit n=1 Tax=Clostri... 255 2e-66 UniRef50_C8WRD7 Nuclease SbcCD, D subunit n=2 Tax=Alicyclobacill... 254 4e-66 UniRef50_Q07GQ3 Exonuclease SbcD, putative n=1 Tax=Roseobacter d... 254 4e-66 UniRef50_C6XKD2 Nuclease SbcCD, D subunit n=1 Tax=Hirschia balti... 254 5e-66 UniRef50_A8VW68 N-acetyl-gamma-glutamyl-phosphate reductase n=1 ... 253 9e-66 UniRef50_C2M1T3 Nuclease SbcCD, D subunit n=3 Tax=Bacteroidetes ... 253 9e-66 UniRef50_Q5P494 Exonuclease SbcD n=1 Tax=Aromatoleum aromaticum ... 253 1e-65 UniRef50_A7V415 Putative uncharacterized protein n=2 Tax=Bactero... 252 2e-65 UniRef50_C6VPS0 Exonuclease SbcD n=5 Tax=Lactobacillales RepID=C... 251 2e-65 UniRef50_Q5LYZ3 ATP-dependent dsDNA exonuclease n=8 Tax=Bacteria... 251 2e-65 UniRef50_C8PR34 Exodeoxyribonuclease I subunit D n=1 Tax=Trepone... 251 3e-65 UniRef50_D1ADM3 Nuclease SbcCD, D subunit n=2 Tax=Actinomycetale... 251 4e-65 UniRef50_A5ZTK8 Putative uncharacterized protein n=3 Tax=Firmicu... 250 5e-65 UniRef50_UPI0001AF0806 nuclease SbcCD, D subunit n=1 Tax=Strepto... 250 8e-65 UniRef50_C7M699 Nuclease SbcCD, D subunit n=2 Tax=Capnocytophaga... 250 1e-64 UniRef50_D1NTD7 Putative nuclease SbcCD, D subunit n=1 Tax=Bifid... 249 1e-64 UniRef50_B2GFI3 Nuclease SbcCD subunit D n=1 Tax=Kocuria rhizoph... 249 1e-64 UniRef50_C7GI85 Exonuclease SbcD (Fragment) n=1 Tax=Roseburia in... 248 2e-64 UniRef50_A6TVN1 Nuclease SbcCD, D subunit n=6 Tax=Clostridiaceae... 248 2e-64 UniRef50_D2LF15 Nuclease SbcCD, D subunit n=1 Tax=Rhodomicrobium... 248 3e-64 UniRef50_C4FEI0 Putative uncharacterized protein n=1 Tax=Bifidob... 248 3e-64 UniRef50_Q2IN32 Exodeoxyribonuclease I subunit D n=3 Tax=Anaerom... 248 4e-64 UniRef50_B8D1T4 Exodeoxyribonuclease I subunit D n=3 Tax=Clostri... 248 4e-64 UniRef50_Q0S486 ATP-dependent dsDNA exonuclease SbcD n=6 Tax=Act... 248 4e-64 UniRef50_C0W8J2 DsDNA exonuclease subunit n=1 Tax=Actinomyces ur... 247 5e-64 UniRef50_A6LCR3 Putative exonuclease n=6 Tax=Bacteroidales RepID... 247 6e-64 UniRef50_A1ZGU7 DNA repair exonuclease n=1 Tax=Microscilla marin... 247 7e-64 UniRef50_Q67MD2 DNA repair exonuclease n=1 Tax=Symbiobacterium t... 246 8e-64 UniRef50_C9KXE7 Nuclease SbcCD, D subunit n=10 Tax=Bacteroides R... 246 9e-64 UniRef50_C7MLN3 Exonuclease SbcD n=1 Tax=Cryptobacterium curtum ... 246 9e-64 UniRef50_C9KJP5 Exonuclease n=3 Tax=Veillonellaceae RepID=C9KJP5... 246 1e-63 UniRef50_B9JT06 ATP-dependent dsDNA exonuclease protein n=3 Tax=... 246 1e-63 UniRef50_D2QSS6 Nuclease SbcCD, D subunit n=1 Tax=Spirosoma ling... 245 2e-63 UniRef50_A7LRG6 Putative uncharacterized protein n=5 Tax=Bactero... 245 2e-63 UniRef50_C5RC55 Exonuclease n=1 Tax=Weissella paramesenteroides ... 245 3e-63 UniRef50_C4L7Q3 Nuclease SbcCD, D subunit n=9 Tax=Gammaproteobac... 244 4e-63 UniRef50_B9EBU8 Putative uncharacterized protein n=1 Tax=Macroco... 243 6e-63 UniRef50_C8WDX4 Nuclease SbcCD, D subunit n=1 Tax=Zymomonas mobi... 243 8e-63 UniRef50_C9L5R8 DNA repair exonuclease n=1 Tax=Blautia hansenii ... 242 2e-62 UniRef50_A4X568 Exodeoxyribonuclease I subunit D n=3 Tax=Micromo... 242 2e-62 UniRef50_Q73RC0 Nuclease SbcCD, D subunit, putative n=1 Tax=Trep... 241 2e-62 UniRef50_A6DE84 Nuclease SbcCD, D subunit n=1 Tax=Caminibacter m... 241 2e-62 UniRef50_O67727 ATP-dependent dsDNA exonuclease n=2 Tax=Aquifica... 241 3e-62 UniRef50_C7XXV6 Nuclease SbcCD n=1 Tax=Lactobacillus coleohomini... 241 5e-62 UniRef50_C8XKJ7 Nuclease SbcCD, D subunit n=2 Tax=Actinomycetale... 240 6e-62 UniRef50_D1BIQ6 Exodeoxyribonuclease I subunit D n=2 Tax=Actinob... 240 8e-62 UniRef50_B6QZR0 Nuclease SbcCD, D subunit n=2 Tax=Alphaproteobac... 239 1e-61 UniRef50_B7GYJ5 Exonuclease sbcD-like protein n=18 Tax=Acinetoba... 239 2e-61 UniRef50_A8L1U9 Nuclease SbcCD, D subunit n=2 Tax=Actinomycetale... 238 2e-61 UniRef50_C8PYK6 Nuclease SbcCD, D subunit n=2 Tax=Pseudomonadale... 237 4e-61 UniRef50_B6WA19 Putative uncharacterized protein n=1 Tax=Anaeroc... 237 6e-61 UniRef50_A5WEF9 Nuclease SbcCD, D subunit n=3 Tax=Psychrobacter ... 236 1e-60 UniRef50_B4U9G5 Nuclease SbcCD, D subunit n=1 Tax=Hydrogenobacul... 234 4e-60 UniRef50_Q1J058 Nuclease SbcCD, D subunit n=3 Tax=Deinococcus Re... 234 4e-60 UniRef50_O68033 Nuclease sbcCD subunit D n=1 Tax=Rhodobacter cap... 234 6e-60 UniRef50_C3WDH5 Nuclease SbcCD n=1 Tax=Fusobacterium mortiferum ... 231 4e-59 UniRef50_B3JFY8 Putative uncharacterized protein n=1 Tax=Bactero... 230 7e-59 UniRef50_C6VTU7 Nuclease SbcCD, D subunit n=1 Tax=Dyadobacter fe... 230 7e-59 UniRef50_B7KZ12 Nuclease SbcCD, D subunit n=8 Tax=Alphaproteobac... 230 8e-59 UniRef50_C9RQA4 Nuclease SbcCD, D subunit n=1 Tax=Fibrobacter su... 228 2e-58 UniRef50_C1XNQ0 Exodeoxyribonuclease I subunit D n=2 Tax=Meiothe... 226 9e-58 UniRef50_Q5SIS5 Exonuclease SbcD n=3 Tax=Thermus RepID=Q5SIS5_THET8 226 9e-58 UniRef50_D0LY15 Nuclease SbcCD, D subunit n=1 Tax=Haliangium och... 226 9e-58 UniRef50_Q1NCL0 Nuclease SbcCD, D subunit n=1 Tax=Sphingomonas s... 226 9e-58 UniRef50_C0EV38 Putative uncharacterized protein n=1 Tax=Eubacte... 226 1e-57 UniRef50_B5HB15 Nuclease SbcCD n=1 Tax=Streptomyces pristinaespi... 226 1e-57 UniRef50_Q3ZXH4 Nuclease SbcD n=5 Tax=Dehalococcoides RepID=Q3ZX... 225 3e-57 UniRef50_C7RGF6 Nuclease SbcCD, D subunit n=4 Tax=Anaerococcus R... 223 7e-57 UniRef50_B2S3L6 Possible exonuclease n=2 Tax=Treponema pallidum ... 223 8e-57 UniRef50_C2KSA5 Possible exonuclease SbcD n=2 Tax=Mobiluncus mul... 223 1e-56 UniRef50_D0LLB1 Nuclease SbcCD, D subunit n=1 Tax=Haliangium och... 223 1e-56 UniRef50_UPI00016C0A35 exonuclease sbcD n=1 Tax=Epulopiscium sp.... 221 3e-56 UniRef50_C2BSE2 Exonuclease SbcD n=1 Tax=Mobiluncus curtisii ATC... 221 4e-56 UniRef50_C9LH67 Exonuclease SbcCD, D subunit n=1 Tax=Prevotella ... 220 7e-56 UniRef50_A3HX94 DNA repair exonuclease n=2 Tax=Bacteroidetes Rep... 218 3e-55 UniRef50_B5YJR9 Exonuclease SbcD n=1 Tax=Thermodesulfovibrio yel... 218 3e-55 UniRef50_D1PAG0 Nuclease SbcCD, D subunit n=1 Tax=Prevotella cop... 216 1e-54 UniRef50_D1BNU6 Nuclease SbcCD, D subunit n=3 Tax=Veillonella Re... 216 1e-54 UniRef50_C8X1L4 Metallophosphoesterase n=1 Tax=Desulfohalobium r... 214 6e-54 UniRef50_B2HL38 DNA repair exonuclease n=1 Tax=Mycobacterium mar... 214 6e-54 UniRef50_O51769 Nuclease sbcCD subunit D n=23 Tax=Borrelia RepID... 213 7e-54 UniRef50_Q63EZ2 DNA repair exonuclease n=76 Tax=Bacillus RepID=Q... 213 8e-54 UniRef50_C0QDX0 DNA repair exonuclease family protein n=1 Tax=De... 211 3e-53 UniRef50_B8HPI4 Nuclease SbcCD, D subunit n=28 Tax=Cyanobacteria... 211 3e-53 UniRef50_C6IVB9 Metallophosphoesterase n=1 Tax=Paenibacillus sp.... 211 5e-53 UniRef50_D1C2F9 Nuclease SbcCD, D subunit n=1 Tax=Sphaerobacter ... 206 1e-51 UniRef50_Q12WJ5 Metallophosphoesterase-domain protein n=1 Tax=Me... 205 2e-51 UniRef50_D2MIU1 Ser/Thr protein phosphatase family protein n=1 T... 204 4e-51 UniRef50_UPI0001C419A3 DNA double-strand break repair protein Mr... 204 6e-51 UniRef50_C6P7X1 Nuclease SbcCD, D subunit n=1 Tax=Thermoanaeroba... 203 9e-51 UniRef50_Q46GD4 Phosphoesterase n=2 Tax=Methanosarcina RepID=Q46... 203 1e-50 UniRef50_UPI00016C3AE3 ATP-dependent dsDNA exonuclease n=1 Tax=G... 202 2e-50 UniRef50_B3QT16 Nuclease SbcCD, D subunit n=1 Tax=Chloroherpeton... 202 2e-50 UniRef50_C6D5T8 Metallophosphoesterase n=1 Tax=Paenibacillus sp.... 201 3e-50 UniRef50_C1PA25 Metallophosphoesterase n=1 Tax=Bacillus coagulan... 197 5e-49 UniRef50_A6BZ13 Putative exonuclease n=1 Tax=Planctomyces maris ... 197 6e-49 UniRef50_Q2S4Q6 Nuclease SbcCD, D subunit subfamily, putative n=... 195 3e-48 UniRef50_Q03GD7 DNA repair exonuclease n=2 Tax=Pediococcus RepID... 194 3e-48 UniRef50_UPI0001788541 metallophosphoesterase n=1 Tax=Geobacillu... 194 4e-48 UniRef50_D2MIT5 Exonuclease subunit SbcD (Fragment) n=1 Tax=Cand... 194 4e-48 UniRef50_A1VMU8 Metallophosphoesterase n=2 Tax=Comamonadaceae Re... 194 5e-48 UniRef50_A7NIU3 Nuclease SbcCD, D subunit n=6 Tax=Chloroflexi (c... 193 8e-48 UniRef50_Q110K3 Nuclease SbcCD, D subunit n=3 Tax=Cyanobacteria ... 192 2e-47 UniRef50_A6U7V3 Metallophosphoesterase n=9 Tax=Alphaproteobacter... 191 3e-47 UniRef50_B9K7R6 Exonuclease n=6 Tax=Thermotogaceae RepID=B9K7R6_... 191 4e-47 UniRef50_B6IR03 Exonuclease, putative n=1 Tax=Rhodospirillum cen... 191 4e-47 UniRef50_Q30V80 Ser/Thr protein phosphatase family protein n=1 T... 191 4e-47 UniRef50_UPI0001693BED phosphoesterase n=1 Tax=Paenibacillus lar... 190 6e-47 UniRef50_Q2NFC6 DNA double-strand break repair protein Mre11 n=1... 189 1e-46 UniRef50_C1P8K4 Metallophosphoesterase n=1 Tax=Bacillus coagulan... 189 1e-46 UniRef50_C6I002 Metallophosphoesterase n=1 Tax=Leptospirillum fe... 189 2e-46 UniRef50_C0WU80 DNA repair exonuclease n=3 Tax=Lactobacillus Rep... 189 2e-46 UniRef50_O07522 Uncharacterized metallophosphoesterase yhaO n=5 ... 188 4e-46 UniRef50_B9KXS7 Putative nuclease SbcCD, D subunit subfamily n=1... 188 5e-46 UniRef50_Q03QD8 DNA repair exonuclease n=1 Tax=Lactobacillus bre... 187 5e-46 UniRef50_A5UJE8 DNA repair exonuclease (SbcD/Mre11-family), Rad3... 187 6e-46 UniRef50_Q5FS56 Putative exonuclease n=1 Tax=Gluconobacter oxyda... 187 7e-46 UniRef50_C1ZLA0 DNA repair exonuclease n=1 Tax=Planctomyces limn... 187 7e-46 UniRef50_A5VL00 Metallophosphoesterase n=7 Tax=Lactobacillus reu... 186 9e-46 UniRef50_D2LYR1 Metallophosphoesterase n=1 Tax=Bacillus cellulos... 186 9e-46 UniRef50_Q2B178 DNA repair exonuclease family protein n=1 Tax=Ba... 186 1e-45 UniRef50_A8U9K7 Putative uncharacterized protein n=1 Tax=Carnoba... 186 1e-45 UniRef50_B2V861 Metallophosphoesterase n=3 Tax=Sulfurihydrogenib... 186 1e-45 UniRef50_B8FC84 Metallophosphoesterase n=1 Tax=Desulfatibacillum... 185 2e-45 UniRef50_Q2RUX3 Metallophosphoesterase n=1 Tax=Rhodospirillum ru... 184 3e-45 UniRef50_Q03Y84 DNA repair exonuclease n=3 Tax=Leuconostoc RepID... 184 4e-45 UniRef50_C5RCI7 DNA repair exonuclease n=1 Tax=Weissella parames... 184 4e-45 UniRef50_B9MRD8 Nuclease SbcCD, D subunit n=1 Tax=Anaerocellum t... 184 4e-45 UniRef50_B1HVJ9 Putative uncharacterized protein n=3 Tax=Bacteri... 184 5e-45 UniRef50_B6AP26 DNA repair exonuclease n=1 Tax=Leptospirillum sp... 183 8e-45 UniRef50_Q8U1N9 DNA double-strand break repair protein mre11 n=4... 183 8e-45 UniRef50_B4SA17 Metallophosphoesterase n=3 Tax=Bacteria RepID=B4... 183 1e-44 UniRef50_C2EVZ4 DNA repair exonuclease n=1 Tax=Lactobacillus vag... 183 1e-44 UniRef50_D1A2M1 Metallophosphoesterase n=2 Tax=Streptosporangine... 183 1e-44 UniRef50_A0AKX5 Complete genome n=19 Tax=Listeria RepID=A0AKX5_L... 182 2e-44 UniRef50_C8P9D8 Ser/Thr protein phosphatase n=1 Tax=Lactobacillu... 182 2e-44 UniRef50_A9H1V1 Putative metallophosphoesterase n=1 Tax=Gluconac... 182 2e-44 UniRef50_A8TGF4 Metallophosphoesterase n=1 Tax=Methanococcus vol... 182 2e-44 UniRef50_Q04FF3 DNA repair exonuclease n=2 Tax=Oenococcus oeni R... 181 3e-44 UniRef50_A7HVL9 Metallophosphoesterase n=3 Tax=Proteobacteria Re... 181 3e-44 UniRef50_A8FBK1 Putative uncharacterized protein yhaO n=1 Tax=Ba... 181 5e-44 UniRef50_C0GNG3 Metallophosphoesterase n=1 Tax=Desulfonatronospi... 181 5e-44 UniRef50_A3ZTZ5 Putative exonuclease n=1 Tax=Blastopirellula mar... 181 6e-44 UniRef50_B6WPR2 Putative uncharacterized protein n=1 Tax=Desulfo... 181 6e-44 UniRef50_Q39WB4 Metallophosphoesterase n=2 Tax=Geobacter RepID=Q... 180 7e-44 UniRef50_Q21A38 Metallophosphoesterase n=4 Tax=Bradyrhizobiaceae... 180 7e-44 UniRef50_A4XJU8 Nuclease SbcCD, D subunit n=1 Tax=Caldicellulosi... 179 1e-43 UniRef50_B8DIF5 Metallophosphoesterase n=4 Tax=Desulfovibrio vul... 179 1e-43 UniRef50_C7QAP2 Metallophosphoesterase n=1 Tax=Catenulispora aci... 179 1e-43 UniRef50_C0Z548 Putative exonuclease sbcCD subunit D n=1 Tax=Bre... 179 2e-43 UniRef50_UPI0001850B9E hypothetical protein Bcoam_05235 n=1 Tax=... 177 8e-43 UniRef50_D0BLI1 DNA repair exonuclease n=1 Tax=Granulicatella el... 176 1e-42 UniRef50_Q0TNF1 Ser/Thr protein phosphatase family protein n=9 T... 176 2e-42 UniRef50_C4FW95 Putative uncharacterized protein n=1 Tax=Catonel... 175 2e-42 UniRef50_D1YYH3 Putative DNA double-strand break repair protein ... 175 2e-42 UniRef50_B9JD37 Serine/threonine-specific protein phosphatase pr... 175 3e-42 UniRef50_C6JB59 Putative uncharacterized protein n=1 Tax=Ruminoc... 175 3e-42 UniRef50_B5IR16 Ser/Thr protein phosphatase family protein n=1 T... 174 3e-42 UniRef50_Q8CUG3 Hypothetical conserved protein n=1 Tax=Oceanobac... 174 4e-42 UniRef50_C9AYT5 Metallophosphoesterase n=4 Tax=Enterococcus RepI... 174 4e-42 UniRef50_A5F9P1 SbcCD related DNA repair protein n=2 Tax=Clostri... 173 7e-42 UniRef50_B1XWG2 Metallophosphoesterase n=21 Tax=Betaproteobacter... 173 8e-42 UniRef50_A0LDI1 Metallophosphoesterase n=1 Tax=Magnetococcus sp.... 173 1e-41 UniRef50_B8ET59 Metallophosphoesterase n=1 Tax=Methylocella silv... 173 1e-41 UniRef50_Q38Y02 Putative metallo-phosphoesterase n=1 Tax=Lactoba... 173 1e-41 Sequences not found previously or not previously below threshold: >UniRef50_P0AG77 Nuclease sbcCD subunit D n=173 Tax=Proteobacteria RepID=SBCD_ECO57 Length = 400 Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats. Identities = 400/400 (100%), Positives = 400/400 (100%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR Sbjct: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG Sbjct: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII Sbjct: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 Query: 181 ATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGS 240 ATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGS Sbjct: 181 ATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGS 240 Query: 241 PIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVS 300 PIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVS Sbjct: 241 PIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVS 300 Query: 301 QEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSEL 360 QEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSEL Sbjct: 301 QEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSEL 360 Query: 361 SVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHEA 400 SVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHEA Sbjct: 361 SVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHEA 400 >UniRef50_D2T4P9 Exonuclease SbcD n=3 Tax=Erwinia RepID=D2T4P9_ERWPY Length = 470 Score = 364 bits (933), Expect = 4e-99, Method: Composition-based stats. Identities = 257/405 (63%), Positives = 304/405 (75%), Gaps = 6/405 (1%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRI+HT+DWHLGQ FY+KSR AEHQAFLDWLLE A+T Q DAIIVAGD+FD GSPPSYAR Sbjct: 64 MRIIHTADWHLGQFFYTKSRAAEHQAFLDWLLEQAETQQADAIIVAGDIFDNGSPPSYAR 123 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ----ILP 116 LYNRFVV LQ TGC LVVL GNHDSVA LNESR+++A LNT V+A+ + +L Sbjct: 124 QLYNRFVVKLQTTGCQLVVLGGNHDSVAMLNESRELLACLNTRVIAAVDEDIRQQVLVLN 183 Query: 117 RRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRG--D 174 RRDG PGA+LC IPFLRPRDI+ SQ+G +G EKQQ LL AI+D+YQ+ + +A R Sbjct: 184 RRDGQPGALLCAIPFLRPRDILRSQSGQSGREKQQSLLEAISDHYQRCWQEALAQRDALG 243 Query: 175 QPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEH 234 PLPIIATGHLTT+G +KSDAVRDIYIGTLDAFPA FPPADYIALGHIHRAQ I +H Sbjct: 244 LPLPIIATGHLTTMGVTKSDAVRDIYIGTLDAFPADGFPPADYIALGHIHRAQRIADSDH 303 Query: 235 VRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLE 294 +RY GSPIPLSFDE GK+K V V F GKL V L +P+ QPM ++KG L I QL Sbjct: 304 IRYSGSPIPLSFDELGKAKSVMRVDFHAGKLAGVTELPIPLFQPMQMIKGSLEQIERQLA 363 Query: 295 QWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQR 354 Q + ++ +WLDIEI TD YL + QR+I+ LT +LPVEV+L+RRSREQRE+V+A QQ Sbjct: 364 QLKPDARGKTIWLDIEIVTDAYLSEPQRRIEELTAALPVEVVLLRRSREQREQVIARQQN 423 Query: 355 ETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHE 399 ETLSELSVEEVF RRLA + +R+ LF TL + E + Sbjct: 424 ETLSELSVEEVFARRLASAPNQPERPERISALFAQTLEAVRHEEQ 468 >UniRef50_D0ZEX0 Nuclease SbcCD, D subunit n=18 Tax=Proteobacteria RepID=D0ZEX0_EDWTE Length = 410 Score = 356 bits (913), Expect = 9e-97, Method: Composition-based stats. Identities = 246/399 (61%), Positives = 297/399 (74%), Gaps = 5/399 (1%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR++HTSDWHLGQ+FY KSR EH+AFLDWLL A+ Q DAIIVAGD+FDTG+PPSYAR Sbjct: 1 MRLIHTSDWHLGQHFYGKSRADEHRAFLDWLLLQAEQQQADAIIVAGDLFDTGTPPSYAR 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVA--SAGHAPQILPRR 118 LYNRFVV LQ GC L+VLAGNHDSVATLNESR+++A L+T V+A A AP +L RR Sbjct: 61 ELYNRFVVALQGRGCQLIVLAGNHDSVATLNESRELLACLHTQVIAGAHADDAPLLLRRR 120 Query: 119 DGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGD--QP 176 DG+PGA+LC +PFLRPRD++ S+AG + EKQ L AI+D+Y Y A L+ QP Sbjct: 121 DGSPGAILCAVPFLRPRDLLQSRAGQSAAEKQLALQQAISDHYHALYQRALALQASLAQP 180 Query: 177 LPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVR 236 LPI+ATGHLTTVGAS S++VRDIYIGTLDA PA FPPADYIALGHIHR Q +G EH+R Sbjct: 181 LPIVATGHLTTVGASGSESVRDIYIGTLDALPASAFPPADYIALGHIHRPQRVGHAEHIR 240 Query: 237 YCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQW 296 Y GSPIPLSFDE G SK V LVT + G + L +P TQPM +LKG L I A +E Sbjct: 241 YSGSPIPLSFDELGSSKSVCLVTLAYGSAPQITQLPIPQTQPMRLLKGSLTEIGAAMEAL 300 Query: 297 RDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRET 356 R ++ + PVWLDIEI +D +L + +R +Q E+LPVE+LL+RRSREQR+R L Q ET Sbjct: 301 RPLATDKPVWLDIEIDSDGWLSESERTLQQQAETLPVEILLLRRSREQRQRALTMQAGET 360 Query: 357 LSELSVEEVFNRRLALE-ELDESQQQRLQHLFTTTLHTL 394 LSEL+ ++VF+RRLALE E D QQ R Q LF L + Sbjct: 361 LSELTPDDVFSRRLALEQESDPQQQARAQRLFQQVLQEI 399 >UniRef50_C7BK94 Nuclease sbccd subunit d n=1 Tax=Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949 RepID=C7BK94_PHOAA Length = 488 Score = 355 bits (910), Expect = 2e-96, Method: Composition-based stats. Identities = 245/401 (61%), Positives = 310/401 (77%), Gaps = 7/401 (1%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRI+HTSDWHLGQ F++KSR AEH+ FL WL+E + +QVDA+IVAGDVFDTGSPPSYAR Sbjct: 70 MRIIHTSDWHLGQYFFTKSRAAEHKHFLHWLVEQIKNYQVDALIVAGDVFDTGSPPSYAR 129 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ----ILP 116 LYNRFVV LQ TGC L++L GNHDSVATLNES+++++ LNTTV+A+A PQ IL Sbjct: 130 ELYNRFVVELQPTGCQLIILGGNHDSVATLNESKELLSCLNTTVIANAEENPQKQIKILN 189 Query: 117 RRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRG--D 174 ++G GA+LC IPFLRPRDI+TSQAG +G +KQ L AI ++Y + Y AC+LR + Sbjct: 190 TQEGNAGAILCAIPFLRPRDIMTSQAGQSGEQKQLALQEAIAEHYNRLYRQACELRDQLN 249 Query: 175 QPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEH 234 PLP+IATGHLTT+GAS +D+VRDIYIGTLDAFPAQ FPPADYIALGHIHR QI+ EH Sbjct: 250 IPLPVIATGHLTTIGASVTDSVRDIYIGTLDAFPAQAFPPADYIALGHIHRPQIVAKSEH 309 Query: 235 VRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLE 294 +RY GSPIPLSFDE G+ K + LV F+ GKLES++ L VP QPM +++G+L I QL+ Sbjct: 310 IRYSGSPIPLSFDEVGQEKSLCLVEFAQGKLESIKLLPVPQYQPMQLIRGNLQQIEQQLQ 369 Query: 295 QWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQR 354 + D + PVWLDIE+ T +YLHDIQ++IQ++ LPVEV+L+RR++ QR+ +L + R Sbjct: 370 TFNDYQGKQPVWLDIEVATQDYLHDIQKRIQSMVAELPVEVILLRRAKIQRQNILTKENR 429 Query: 355 ETLSELSVEEVFNRRLALEEL-DESQQQRLQHLFTTTLHTL 394 ETL+ELS+ EVF RRL EL DE ++RL LF TL+ + Sbjct: 430 ETLTELSINEVFARRLEQTELNDEEHKKRLTTLFEQTLNEI 470 >UniRef50_A6VXU9 Nuclease SbcCD, D subunit n=2 Tax=Marinomonas RepID=A6VXU9_MARMS Length = 425 Score = 324 bits (830), Expect = 4e-87, Method: Composition-based stats. Identities = 175/419 (41%), Positives = 256/419 (61%), Gaps = 21/419 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLGQ+F KSR EH+AF+DWLL +DA+I+AGDVFDTGSPPSYAR Sbjct: 1 MKILHTSDWHLGQHFMGKSRRDEHKAFIDWLLALVDKESIDAVIIAGDVFDTGSPPSYAR 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTV-----VASAGHAPQIL 115 +Y++ V++++ C LV++AGNHDSV+ LNES+ ++ +L+T V + L Sbjct: 61 EMYHQLVLDMKARQCQLVIVAGNHDSVSMLNESKSLLTYLDTQVSSQANLEDIESHVIPL 120 Query: 116 PRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACK--LRG 173 + G A +C +P+LRP+D++ S AG + +K+ LL I D+YQ+ Y AC+ Sbjct: 121 KDKKGEVAAWVCAVPYLRPKDVMQSVAGQSEQDKKLSLLQMIGDFYQRVYEAACEKNKAL 180 Query: 174 DQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGME 233 P+PII TGHLT VG S++VRD+Y+GTL+A P FP DY+ALGHIHRAQ I Sbjct: 181 KTPVPIIGTGHLTAVGGQVSESVRDLYVGTLEALPTSVFPAFDYLALGHIHRAQPISKSG 240 Query: 234 HVRYCGSPIPLSFDECGKSKYVHLVTFS------------NGKLESVENLNVPVTQPMAV 281 RY GSPIPLSFDE G+ K + + + V+ + +P QPMA Sbjct: 241 RFRYSGSPIPLSFDELGRDKTLVMFDTDLLGEDTFVEDLFAEPTDPVQLVTIPNFQPMAS 300 Query: 282 LKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRS 341 LKG+L + Q+ +++++ +WL++ + DEYL D+ +++ + + P+E+L V R Sbjct: 301 LKGNLKEVIKQISAL-ELAEDKTLWLEVTVIADEYLSDVHKRLLEVIDGKPIELLRVMRR 359 Query: 342 REQRERVLASQQRETLSELSVEEVFNRRLALE-ELDESQQQRLQHLFTTTLHTLAGEHE 399 ++ + + R+TLSEL+V +VF + L ELDE + + L LF T L L + Sbjct: 360 SAVEKKNESFEARKTLSELTVGDVFQQSLKSNLELDEEESKMLTELFQTCLVELEEHQQ 418 >UniRef50_Q2FMB7 Exodeoxyribonuclease I subunit D n=2 Tax=cellular organisms RepID=Q2FMB7_METHJ Length = 410 Score = 322 bits (826), Expect = 1e-86, Method: Composition-based stats. Identities = 144/408 (35%), Positives = 223/408 (54%), Gaps = 12/408 (2%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLG + R EH+ FL WLL VD +IVAGD+FDT +PP+ + Sbjct: 1 MKILHTSDWHLGNQICGRKRYDEHEQFLSWLLSLINREGVDILIVAGDIFDTTTPPNRSL 60 Query: 61 TLYNRFVVNLQQTGC-HLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ----IL 115 Y +F+ + C +++ AGNHDS + + R++ +LN TVV P+ IL Sbjct: 61 EQYYQFLARAAGSSCRQIIITAGNHDSPSLIAAPRELCKYLNITVVGQVPDDPEELITIL 120 Query: 116 PRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQ 175 +DG P ++CP+P+LR RD+ T QAG + EK +L+ I Y + A K+R + Sbjct: 121 KDQDGRPELIICPVPYLRDRDVRTMQAGESAGEKAANLIEGIKARYHAIGSCAEKMREEM 180 Query: 176 P--LPIIATGHLTTVGA--SKSDAVRDIYIGTLDAFPAQNFPP-ADYIALGHIHRAQIIG 230 +PIIATGHL G + D RD+Y+GTL + A FP DY+ALGH+H Q + Sbjct: 181 GDFIPIIATGHLFAAGGITREDDGCRDLYLGTLASVGADAFPSCIDYLALGHLHLPQRVC 240 Query: 231 GMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASIT 290 G + +RY G+P+P+ F E G++K V ++ + + SV+ + VPV Q + + G + Sbjct: 241 GNDRMRYSGAPLPMGFGEAGQTKSVLMLDVQDSRNMSVKEIPVPVFQQLRRISGAFEEVL 300 Query: 291 AQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLA 350 +L + + + P +++ + + D +I+ + PVEVL V+ R + + Sbjct: 301 KELGRLK--MEYSPALVEVILEDPRIIPDASERIRTTIQGSPVEVLKVKAQRISAQAMQP 358 Query: 351 SQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEH 398 + E+L+ LS EEVF+RRL E+ + ++Q L F L E Sbjct: 359 ERAEESLAGLSPEEVFHRRLDAAEIPKEERQELLESFHEIYSELLEED 406 >UniRef50_Q2LRF1 Exonuclease n=8 Tax=Bacteria RepID=Q2LRF1_SYNAS Length = 414 Score = 320 bits (820), Expect = 5e-86, Method: Composition-based stats. Identities = 141/408 (34%), Positives = 219/408 (53%), Gaps = 13/408 (3%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M++LHTSDWHLG+ + + R AEHQAFL+WL +T +D ++VAGDVFD +P + A+ Sbjct: 1 MKLLHTSDWHLGRALHGRKRYAEHQAFLEWLAALIETEDIDVLLVAGDVFDNSTPGNVAQ 60 Query: 61 TLYNRFVVNLQQTG-CHLVVLAGNHDSVATLNESRDIMAFLNTTVVA----SAGHAPQIL 115 LY RF+ + + H+V+ AGNHDS + LN D++ FLN VV S + Sbjct: 61 ELYYRFLCRVAASSRRHVVITAGNHDSPSFLNAPGDLLKFLNIHVVGCACPSPEEELVTI 120 Query: 116 PRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL--RG 173 DG P ++C +P+LR RDI T++AG + +K++ ++ I D+Y++ Y A + R Sbjct: 121 AGADGEPRLIVCAVPYLRDRDIRTAEAGESVEDKERKIIEGIRDHYRKVYDAARRKNSRL 180 Query: 174 DQPLPIIATGHLTTVGAS--KSDAVRDIYIGTLDAFPAQNF-PPADYIALGHIHRAQIIG 230 P+PI+ GHL G D VR++YIGTL F P DY+ALGH+H Q + Sbjct: 181 KSPVPIVVMGHLYAAGGKTVDGDGVRELYIGTLLHVGTDVFPPDIDYVALGHLHIPQTVS 240 Query: 231 GMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASIT 290 G+ +RY GSP+P+ F E + K V LV F ++VP + + L+GD +I Sbjct: 241 GLGRIRYSGSPLPIGFGEGTQEKSVMLVEF-PCSTSRATEISVPRFRELMTLRGDWQTIV 299 Query: 291 AQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLA 350 LE + S+ WL++ +E + +++ + +E+L VR +R + Sbjct: 300 RNLEDLK--SRGSNAWLEVIYEGNEMIGNMRALLDETIAGTGMEILRVRNNRILEHALKR 357 Query: 351 SQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEH 398 ETL +L +VF R L E+ E ++ L + L +L + Sbjct: 358 MTANETLEDLDTTDVFKRCLEAHEIPEEKRSALLDAYREILVSLNEQD 405 >UniRef50_A1SUG4 Exodeoxyribonuclease I subunit D n=2 Tax=Psychromonas RepID=A1SUG4_PSYIN Length = 408 Score = 318 bits (815), Expect = 2e-85, Method: Composition-based stats. Identities = 165/403 (40%), Positives = 245/403 (60%), Gaps = 6/403 (1%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLGQ F K+RE+EH FL+WL+E Q+DA+IVAGD+FD+ SPPSYAR Sbjct: 5 MKILHTSDWHLGQYFMMKTRESEHLHFLNWLIEVVNKQQIDALIVAGDIFDSASPPSYAR 64 Query: 61 TLYNRFVVNLQQTGC-HLVVLAGNHDSVATLNESRDIMAFLNTTVVA--SAGHAPQILPR 117 LY+ F+V LQ++ C L+++AGNHDS+A LNE++D++ L+ +V+A S I+ Sbjct: 65 KLYSDFIVRLQKSSCRQLIIMAGNHDSIAVLNENKDLLKALDVSVLAGLSDDLNEHIIEL 124 Query: 118 RDG--TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQ 175 +D A++C +PFLR D++ S G + +KQ L I D YQ + A ++ Sbjct: 125 KDDRQNTQALVCALPFLRAADVMRSVQGSSAADKQISLQQGIADTYQSIFELANAQCHEK 184 Query: 176 PLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHV 235 LPIIATGHLT VG S SD+VR+IYIGTL AFPA FP +YIALGH+HRAQ + +H+ Sbjct: 185 ALPIIATGHLTAVGCSVSDSVREIYIGTLTAFPAVLFPAFNYIALGHLHRAQKVQKTDHI 244 Query: 236 RYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQ 295 RYCGSPI LSFDE + K ++++ F +V +PV Q M V+ GDL S+ QL++ Sbjct: 245 RYCGSPIALSFDETRQQKNINIIEFDTNNALTVNETVIPVFQRMQVISGDLESVIEQLQE 304 Query: 296 WRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRE 355 + W+++++ YL D+ + + +E+L + + + + Sbjct: 305 LKKELAGESAWIEVKLKQAFYLSDVHALLNEQVQESQIEILKISSPTINEKNQYQAADKS 364 Query: 356 TLSELSVEEVFNRRLALEE-LDESQQQRLQHLFTTTLHTLAGE 397 TL L+ ++F RL +E+ + Q+++L LF + + Sbjct: 365 TLDNLTPADLFQHRLQIEDSYSDQQREQLTKLFAEVCSEVEHK 407 >UniRef50_A9BQD1 Nuclease SbcCD, D subunit n=5 Tax=Burkholderiales RepID=A9BQD1_DELAS Length = 425 Score = 316 bits (810), Expect = 8e-85, Method: Composition-based stats. Identities = 199/410 (48%), Positives = 264/410 (64%), Gaps = 15/410 (3%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR+LHTSDWHLGQ+F KSR+AEH A +DWLLE VDA+++AGD+FDTG+PPSYAR Sbjct: 1 MRLLHTSDWHLGQHFMGKSRQAEHAALIDWLLEQVDAQAVDAVLIAGDIFDTGAPPSYAR 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGH-----APQIL 115 LY++ VV L G L++L GNHDSVATL E+R+++A L+TTVVA+ G L Sbjct: 61 ELYSQLVVRLHAAGVALLLLGGNHDSVATLAENRELLACLDTTVVAAVGETASHVVELPL 120 Query: 116 PRRDGTPGA---VLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYA------ 166 RR G P A ++C +PF+RPRD++ SQ G + +KQQ L AAI Y+ + Sbjct: 121 RRRPGQPAAPGCIVCALPFMRPRDLVLSQPGQSAEQKQQALQAAIESCYRSVHDAAMARR 180 Query: 167 DACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRA 226 DA Q LPIIATGHLTTVGAS S++VR+IY+G+LDAFP FPPADY+ALGHIH+ Sbjct: 181 DALAAASGQRLPIIATGHLTTVGASSSESVREIYVGSLDAFPTSAFPPADYVALGHIHQP 240 Query: 227 QIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDL 286 Q +GG+EH+RY GSPI LSFDE +SK + LV L++V L VP QPMA + G L Sbjct: 241 QKVGGLEHIRYSGSPIALSFDEARQSKQMLLVDLGPEGLQAVTPLPVPCFQPMASVAGSL 300 Query: 287 ASITAQLEQWRDVS-QEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQR 345 ++ + VWL++ + D+YL + ++QAL + LPVE+L VRR R + Sbjct: 301 TALPDLMRAAAQAGSPARSVWLEVVVEQDDYLPQLTDRVQALADELPVELLRVRRQRGRA 360 Query: 346 ERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLA 395 +A+ E+L E+S +VF RRLALE L+ Q L + + L Sbjct: 361 VAGMAAAAGESLHEISPADVFERRLALETLEPGLAQALTRRYQEVVAGLD 410 >UniRef50_Q3JD79 Exodeoxyribonuclease I subunit D n=11 Tax=Bacteria RepID=Q3JD79_NITOC Length = 418 Score = 313 bits (801), Expect = 1e-83, Method: Composition-based stats. Identities = 147/414 (35%), Positives = 235/414 (56%), Gaps = 16/414 (3%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR+LHTSDWH+G+ Y + R E +AFL+WL ET Q H++DA++VAGDVFDT +P A+ Sbjct: 1 MRVLHTSDWHIGRTLYGRKRYEEFEAFLNWLAETIQQHEIDALLVAGDVFDTSTPSHRAQ 60 Query: 61 TLYNRFVVNLQQTGC-HLVVLAGNHDSVATLNESRDIMAFLNTTVVA----SAGHAPQIL 115 LY RF+ + + C H++V+AGNHDS + LN ++++ L+ VV +L Sbjct: 61 ELYYRFLCWVAASSCRHVIVVAGNHDSPSFLNAPKELLKALDVHVVGSTTSDLEEEVLVL 120 Query: 116 PRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGD- 174 P ++C +P+LR RDI ++AG + +K++ L+ I +Y A A + R + Sbjct: 121 RNEQDAPELIVCAVPYLRDRDIRVAEAGESVEDKERKLIDGIRTHYAAVAALAEQKREEL 180 Query: 175 -QPLPIIATGHLTTVGAS--KSDAVRDIYIGTLDAFPAQNFPP-ADYIALGHIHRAQIIG 230 +PI+A GHL T G D VR++Y+G+L A+ FP DY+ALGH+H Q + Sbjct: 181 GGDIPIVAMGHLFTAGGQTVDGDGVRELYVGSLAHVTAEVFPASFDYLALGHLHVPQKVK 240 Query: 231 GMEHVRYCGSPIPLSFDECGKSKYVHLVTFSN----GKLESVENLNVPVTQPMAVLKGDL 286 G E +RY GSP+P+ F E + K V V F + SV+ ++VPV Q + +KGD Sbjct: 241 GSETMRYSGSPLPMGFGEAKQQKSVCRVAFDPIEGHSRAASVQLIDVPVFQKLERIKGDW 300 Query: 287 ASITAQLEQWRD--VSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQ 344 I+++L + +WL++ DE + D++ +++A P+E+L ++ +R Sbjct: 301 GGISSRLLELSAMGPPNGLRIWLEVIYEGDEVVGDLRERLEAAIAGTPMEILRIKNNRII 360 Query: 345 RERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEH 398 + ETL +L+V +VF R LA+ E+ E Q+ L ++ TL +L + Sbjct: 361 DRMLGQIHAEETLDDLNVNDVFERCLAIHEVPEDQRPELLRVYRETLSSLYEDD 414 >UniRef50_Q480G5 Exonuclease SbcD n=1 Tax=Colwellia psychrerythraea 34H RepID=Q480G5_COLP3 Length = 506 Score = 310 bits (793), Expect = 7e-83, Method: Composition-based stats. Identities = 208/439 (47%), Positives = 268/439 (61%), Gaps = 42/439 (9%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRI+HTSDWHLGQ FY KSR EHQ FL WLL H +DAIIVAGD+FDT +PPSYAR Sbjct: 1 MRIIHTSDWHLGQYFYGKSRANEHQQFLTWLLAQVTLHNIDAIIVAGDIFDTSTPPSYAR 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVAS------------- 107 +Y F+ L T C L++LAGNHDSVA L+ES+ ++A L+T V+ Sbjct: 61 EMYFDFIAKLHVTQCQLIILAGNHDSVAMLSESQAVLASLSTRVITQVIPASLSEDELEE 120 Query: 108 --AGHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHY 165 L DG A++C IPF+RPRD+I S+AG + +KQQ L AI+D+YQ Y Sbjct: 121 KALSKQVFPLHDADGKTTAIICAIPFVRPRDVIRSRAGQSASDKQQSLQQAISDHYQYLY 180 Query: 166 ------ADACKLRGDQPLPIIATGHLTTVGA----SKSDAVRDIYIGTLDAFPAQNFPPA 215 ADA + LPIIATGHLT +G SKSD+VRDIYIG+L+AFPA FPPA Sbjct: 181 QQARKQADAFEKTEGIALPIIATGHLTALGVSINDSKSDSVRDIYIGSLEAFPASAFPPA 240 Query: 216 DYIALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPV 275 DYIALGHIHRAQ + EH+RYCGSPI LSFDE + K V +V F++GKL VE L VP Sbjct: 241 DYIALGHIHRAQQVAKSEHIRYCGSPIALSFDEAKQDKRVLMVEFTSGKLNQVEALIVPC 300 Query: 276 TQPMAVLKGDLASITAQLEQWRDVSQEP----------PVWLDIEITTDEYLHDIQRKIQ 325 QP+ ++K + + L++ +E WLDIEI ++L D+ +++ Sbjct: 301 FQPLYMVKTSVDELETSLQETLVAFEERQVAEKFPASVKAWLDIEIDNGDHLSDLSQRVT 360 Query: 326 ALTESLPVEVLLVRR---SREQRERVLASQQRETLSELSVEEVFNRRLALEE--LDES-- 378 L +P EVLLVRR +R++R+ L+ Q TLSELS+ EVF+ RL+ E DE Sbjct: 361 ELAVDMPFEVLLVRRCKKARQRRQAQLSQQDNSTLSELSLTEVFDSRLSQLEWQTDEEVA 420 Query: 379 QQQRLQHLFTTTLHTLAGE 397 ++ RL LFT + Sbjct: 421 RKTRLTQLFTELSVEMKQA 439 >UniRef50_A4BZB7 Exonuclease SbcD n=2 Tax=Flavobacteriaceae RepID=A4BZB7_9FLAO Length = 400 Score = 310 bits (793), Expect = 8e-83, Method: Composition-based stats. Identities = 121/401 (30%), Positives = 193/401 (48%), Gaps = 5/401 (1%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHT+DWHLG S+ E FL W+ + +D ++++GD+FDTG+P + Sbjct: 1 MKILHTADWHLGHRLLEHSQLEEQTLFLSWIESYIIENNIDVLLISGDIFDTGTPSHQSL 60 Query: 61 TLYNRFVVNLQQTGCH-LVVLAGNHDSVATLNESRDIMAFLNTTVVASAGH--APQILPR 117 +Y F+V L+ T C +V+ GNHDS TLN + ++ L+ VV A ++ Sbjct: 61 GMYYNFLVQLKATTCKSVVITGGNHDSPGTLNAPKQLLDALSIKVVGKATEKIEDEVFEI 120 Query: 118 RDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPL 177 ++ +P+LR DI + AG + E A+ ++Y A C+ Sbjct: 121 EVLGEKVIVGAVPYLRDGDIRRAVAGESFDELTDKYKTALINHYHAS-AKQCEKINTSKA 179 Query: 178 PIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPP-ADYIALGHIHRAQIIGGMEHVR 236 P+IA GHL G S SD+ ++IY+GTL A++FP DYIALGH+HR QIIGG VR Sbjct: 180 PVIAMGHLFATGGSVSDSEQNIYVGTLGHIGAEDFPTYFDYIALGHLHRPQIIGGNAKVR 239 Query: 237 YCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQW 296 Y GSP LSF E K V ++T N + +++ +P + L G + T Q Sbjct: 240 YSGSPNILSFSEIDYDKKVIILTIENNTITTIKEGVIPCFREFYRLTGTVVECTDQFPNI 299 Query: 297 RDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRET 356 + W++I + D ++ K A S + + R+ + + ++ Sbjct: 300 ISNLYQLTPWVEIVLNEDRSVNTDSLKEMAKNHSFEILKTSFKNQRKTKGIEELLENAKS 359 Query: 357 LSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGE 397 + EL EVF + D +Q ++ F L ++ + Sbjct: 360 IKELVPTEVFRLKCKEMGFDLEEQPKIWDAFNEILQSVKSQ 400 >UniRef50_B4RWA2 Exonuclease SbcD n=3 Tax=Alteromonadales RepID=B4RWA2_ALTMD Length = 515 Score = 308 bits (788), Expect = 3e-82, Method: Composition-based stats. Identities = 205/466 (43%), Positives = 273/466 (58%), Gaps = 67/466 (14%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLGQ+F++KSR+ EH AFL WLL+ + HQ+DAIIVAGDVFDTG+PPSYAR Sbjct: 24 MKILHTSDWHLGQSFFTKSRKKEHAAFLKWLLQQVEAHQIDAIIVAGDVFDTGTPPSYAR 83 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVV----ASAGHAPQILP 116 LY+ F+ LQ C LVVL GNHDSV+ LNES+ ++ +LN+ V+ L Sbjct: 84 ELYHAFIGELQGMQCTLVVLGGNHDSVSVLNESKALLKYLNSHVIASTYGEISEQVIALK 143 Query: 117 RRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLR---- 172 R G P AVLC +PF+RPRD++ S++G + +K+Q L AI +Y Y++A LR Sbjct: 144 NRKGQPSAVLCAVPFIRPRDVLVSESGQSATDKRQALGNAIKQHYASLYSEALTLRNTLG 203 Query: 173 ---------GDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHI 223 +PIIATGHLT +G S+S++VRDIYIGTL+ F A+ FPPADYIALGHI Sbjct: 204 NNRLEEGIDHSAAIPIIATGHLTALGVSQSESVRDIYIGTLEGFDAKGFPPADYIALGHI 263 Query: 224 HRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSN-GKLESVENLNVPVTQPMAVL 282 HR Q + EH+RY GSPIPLSFDE K + LV F ++ L VP Q M V+ Sbjct: 264 HRPQKVAKAEHIRYSGSPIPLSFDELTSQKQIVLVEFDGVSTTPNISTLPVPRFQAMEVI 323 Query: 283 KGDLASITAQLEQWRDVS------------------------------QEPPVWLDIEIT 312 KGDL +I A + + ++ + PVWL IE+ Sbjct: 324 KGDLKAIEAMINESEAIAYASLANEDQNASSEPLASHEASSSNEKPFGSKDPVWLCIEVE 383 Query: 313 TDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLAL 372 T++YL D+Q++IQ L E E+L ++R R++ + L+ +Q LSELSV EVF RLAL Sbjct: 384 TEDYLTDLQQRIQGLLEGKNAEILQLKRMRKRTVKSLSEKQNIQLSELSVNEVFEARLAL 443 Query: 373 EELDESQQQ-------------------RLQHLFTTTLHTLAGEHE 399 E LDE + R++HLF + + E Sbjct: 444 ESLDEEPNETSNEASELPQKNTEPSRIKRIKHLFAEAVALVHTNKE 489 >UniRef50_B3EQD7 Nuclease SbcCD, D subunit n=1 Tax=Chlorobium phaeobacteroides BS1 RepID=B3EQD7_CHLPB Length = 498 Score = 307 bits (787), Expect = 4e-82, Method: Composition-based stats. Identities = 140/465 (30%), Positives = 226/465 (48%), Gaps = 68/465 (14%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLG++ Y + R E AFLDWL+ET + +D ++VAGDVFD+ +P + A+ Sbjct: 33 MKILHTSDWHLGRSLYGRKRYEEFSAFLDWLVETIEDEGIDVLLVAGDVFDSSTPGNRAQ 92 Query: 61 TLYNRFVVNLQQTGC-HLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA---PQILP 116 LY RF+ + + C H+VV+AGNHDS + LN ++++ LN V+ + A + Sbjct: 93 ELYYRFLCRVSNSCCRHIVVIAGNHDSPSFLNAPKELLRALNVHVIGAVTDALEDEVFVI 152 Query: 117 RRDGTPG----------------------AVLCPIPFLRPRDIITSQAGLNGIEKQQHLL 154 G+ A++C +P+LR +D+ T + G +K + L+ Sbjct: 153 DDFGSEKSDSGQTSGQLEFFHSKISDQKSAIICAVPYLRDKDVRTVEPGETIDDKNRKLV 212 Query: 155 AAITDYYQQHYADACKLR-------------------------GDQPLPIIATGHLTTVG 189 I ++Y + A + R P+PIIA GHL T G Sbjct: 213 EGIREHYARVVEIAEQKRHALLRQPAVRSQTSKIDTQKSKIQNHQSPIPIIAMGHLFTAG 272 Query: 190 AS--KSDAVRDIYIGTLDAFPAQNFPP-ADYIALGHIHRAQIIGGMEHVRYCGSPIPLSF 246 + D VR++Y+G+L + FPP DY+ALGH+H Q +GG EH+RY GSP+P+ F Sbjct: 273 GKTVEGDGVRELYVGSLAHVGKEVFPPSIDYVALGHLHVPQAVGGAEHIRYSGSPLPMGF 332 Query: 247 DECGKSKYVHLVTFS------------NGKLESVENLNVPVTQPMAVLKGDLASITAQLE 294 E + K + +V F + + L VP QP+ + G L I A+LE Sbjct: 333 GEANQQKSMVIVEFGLEKAVKLQKSPLKNQKSKISLLPVPCFQPLVRITGSLEDIQARLE 392 Query: 295 QWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQR 354 + + E WL+IE T E + +++ I+ +EV ++ + + ++ Sbjct: 393 ELKK--DESRAWLEIEYTGREIIGNLRESIEETLSDSSMEVRRIKNRMVMDRVIGSIEEE 450 Query: 355 ETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHE 399 E L +L +EVF R L ++ ++ L + + + E Sbjct: 451 EALDDLDAQEVFTRCLDAFDVPHEDREELNGAYNEVVRDVLEEDR 495 >UniRef50_C1TLY0 Exonuclease SbcD n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TLY0_9BACT Length = 404 Score = 302 bits (774), Expect = 1e-80, Method: Composition-based stats. Identities = 129/401 (32%), Positives = 201/401 (50%), Gaps = 10/401 (2%) Query: 4 LHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYARTLY 63 LHTSDWHLG++ + R E FLDWL VD ++VAGDVFDTG+P S + LY Sbjct: 2 LHTSDWHLGKSLCGRRRTEEQAEFLDWLAGLILRESVDLLLVAGDVFDTGTPGSGVQRLY 61 Query: 64 NRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVA--SAGHAPQILPRRDGT 121 RF+ ++ ++GC +VV+AGNHDS + L+ DI+ ++N V+ + DG Sbjct: 62 YRFLCSVAESGCSVVVVAGNHDSPSLLDAPSDILGYMNVFVLGVADPEREVVSIVDGDGE 121 Query: 122 PGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRG-DQPLPII 180 A++ +P+LR RDI S + +++ + L + ++Y + + K +P I Sbjct: 122 VIALVGAVPYLRERDIRRSSWSDDPMDRDRALALGVEEHYSRIFETMRKKSESSPGVPRI 181 Query: 181 ATGHLTTVGA--SKSDAVRDIYIGTLDAFPAQNFPP-ADYIALGHIHRAQIIGGMEHVRY 237 A GHL G D RD+Y+G L FP DY+ALGHIH AQI+GG E RY Sbjct: 182 AMGHLFAAGGKVKDDDGSRDLYVGGLGRVGTDIFPDWLDYVALGHIHGAQIVGGRERCRY 241 Query: 238 CGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWR 297 GSP+PL F E G K V+LV G S + VP + LKG+ +++ L + Sbjct: 242 SGSPMPLGFGESGMEKSVYLVDLE-GPDFSCRAVPVPSRTEVISLKGNRHALSEGLSELV 300 Query: 298 DVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETL 357 V + P ++ + D ++ ++++ + VE+L V+ + + L Sbjct: 301 LVGR--PCLVEAVLCDDVPFSSLREDLESIVDGSSVELLRVKDGTGING-NWSFEVSGGL 357 Query: 358 SELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEH 398 ++ E+VF RRL L + + +F L + + Sbjct: 358 ESMTEEDVFLRRLEGVSLKQDVRDIYVAMFREVLQDILDQD 398 >UniRef50_C7HA25 Exonuclease SbcD n=4 Tax=Clostridiales RepID=C7HA25_9FIRM Length = 408 Score = 293 bits (749), Expect = 8e-78, Method: Composition-based stats. Identities = 90/393 (22%), Positives = 159/393 (40%), Gaps = 17/393 (4%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR LH SD HLG+ S + + L+ +L +H VDA+++AGD++D PP+ A Sbjct: 30 MRFLHLSDLHLGKRVCEFSMLDDQRYILEQILSLLDSHPVDAVLLAGDLYDKPVPPAEAV 89 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 L + F+ L + ++GNHDS + ++A V P+ + D Sbjct: 90 RLLDWFLTELSHRELPVFAISGNHDSADRVAFGSALLAESRVYVSPVFSGPPEPITLTDA 149 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 L +PFL+P + IE LA + D+ D + Sbjct: 150 HGPVDLYLLPFLKPAMVRHIWPDAP-IESYNDALACVLDHCS----------PDPARRSV 198 Query: 181 ATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGS 240 H GA+ ++ +G +D A F DY+ALGH+H Q + G + +RYCG+ Sbjct: 199 LVAHQFVAGAASCESEEP-SVGGIDWVDAALFDKFDYVALGHLHSPQKV-GRDTLRYCGT 256 Query: 241 PIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVS 300 P+ SF E + K V V ++ + + L+G +T + Sbjct: 257 PLKYSFSEANQHKSVTFVELGEKGSVTIAAEPLVPRHDLRELRGSYMELTDRRNY---EG 313 Query: 301 QEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSEL 360 +L I +T ++ + + +++ + +L + + R + R+ + A + E + L Sbjct: 314 TTVDDYLHITLTDEQDIPEALARLRVIYPNL-MRLDYDNRRTQTRQELDAPAKAEQKTPL 372 Query: 361 SVEEVFNRRLALEELDESQQQRLQHLFTTTLHT 393 F + + L Q Q L + Sbjct: 373 EHFADFYQLQNNQPLTHEQAAFCQQLIESIWKE 405 >UniRef50_B8KMM7 Nuclease SbcCD, D subunit n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KMM7_9GAMM Length = 381 Score = 290 bits (743), Expect = 4e-77, Method: Composition-based stats. Identities = 91/398 (22%), Positives = 168/398 (42%), Gaps = 19/398 (4%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M++LHTSDWHLG+ + S + Q +D + A+ VDA+++AGD++D PP A Sbjct: 1 MKLLHTSDWHLGRFLHQHSLLDDQQHVVDQIAAIAKEESVDAVMIAGDLYDRAVPPGEAI 60 Query: 61 TLYNRFVVNLQ-QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 LY++F+ + G ++ +AGNHDS + ++ TV + Sbjct: 61 GLYDKFLDAICIDLGLPVLAIAGNHDSGERVGFGASLLGQAGYTVSGQLPETFVPVTLNA 120 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 G + +P+ +P + + + + P Sbjct: 121 GGESVDVFLVPYAQPAQVRDCYGVECNTH----------EEAMKFLLGKIEESRSGDRPT 170 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCG 239 + H G+S SD+ R++ +G D PA F DY+ALGH+H Q EH+RY G Sbjct: 171 VVMAHCFVAGSSVSDSERELSVGGADNIPADLFVNFDYVALGHLHGPQRCSE-EHIRYSG 229 Query: 240 SPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDV 299 SP+ SF E G +K V +V + SV + + + +++G L+ I Q Sbjct: 230 SPLKYSFSEVGHTKSVTIVEIGSSG-VSVAQRTLRSLRDVRIVEGLLSEILEQA----KT 284 Query: 300 SQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSE 359 ++ + ++ + D+ +++ + ++ ++V+ RS Q+ Sbjct: 285 DPGSEDYIQVRLSDSDSQLDVMARLREVYPNV-MQVVYTDRSSPLMSSAEDIQEHLHTGH 343 Query: 360 LSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGE 397 F + + EEL+E+Q+ L + + + Sbjct: 344 FDRFARFFKEIKGEELNEAQRSHLNLVISEV-QEIMDA 380 >UniRef50_D1Y745 Nuclease SbcCD, D subunit n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y745_9BACT Length = 404 Score = 290 bits (743), Expect = 5e-77, Method: Composition-based stats. Identities = 139/406 (34%), Positives = 212/406 (52%), Gaps = 14/406 (3%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHTSDWHLG+ + R E + FLDWL +T + DA++VAGDVFD+ +PP +A+ Sbjct: 1 MRILHTSDWHLGRKLCGQERADEFRRFLDWLTDTLICERADALVVAGDVFDSYTPPLWAQ 60 Query: 61 TLYNRFVVNLQQTGCH-LVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP----QIL 115 +LY RF+ L +T C V++AGNHDS A L+ R+++ L+ VV + P L Sbjct: 61 SLYYRFLTGLSRTPCRSAVIVAGNHDSAALLDSPRELLDRLDVHVVGAPAQDPGAEIFEL 120 Query: 116 PRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQ 175 P G GA+ C +PFLR RD+ + +G + + L +Y A A R + Sbjct: 121 PDAQGKTGALCCAVPFLRSRDLCGAMSGEDADAIARAELDGFAKHYADVCALAETRRAGR 180 Query: 176 PLPIIATGHLTTVGAS--KSDAVRDIYIGTLDAFPAQNFP-PADYIALGHIHRAQIIGGM 232 +PI+A GH G + D VRD+ +G+L A P FP DY+ALGH+H Q GG Sbjct: 181 DVPIVALGHCFAAGGAVRDDDGVRDLAVGSLGAVPLSAFPENVDYLALGHLHMPQTCGGR 240 Query: 233 EHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQ 292 E RY G+P+ + F E G+ K V +V F G+ SV ++VPV Q + LKG I A Sbjct: 241 ESRRYSGAPLCMGFGEAGQKKQVCVVDFD-GRAASVRAVDVPVWQEILRLKGSFDEIAAA 299 Query: 293 LEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALT-ESLPVEVLLVRRSREQRERVLAS 351 L + + VW++ + + + +I+ LT + V++L V+ + V + Sbjct: 300 LSELERSGRS--VWVEADCADEGA-RGLNDRIRELTGDGGAVKILRVKVADAGLAEVFSG 356 Query: 352 QQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGE 397 + + S EVF L+ +++ + + L + L + E Sbjct: 357 -AGDLNEDWSPREVFRLYLSEHQIEGEEAEALTGAYLEALEAMRTE 401 >UniRef50_C8NB09 Nuclease sbcCD subunit D (Fragment) n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NB09_9GAMM Length = 412 Score = 290 bits (742), Expect = 6e-77, Method: Composition-based stats. Identities = 148/404 (36%), Positives = 219/404 (54%), Gaps = 11/404 (2%) Query: 2 RILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYART 61 ++LHT+D HLG++ Y + R E AFLDWL +DA+++AGD+FDT +P ++ Sbjct: 11 KLLHTADIHLGRHLYGRRRHHEFAAFLDWLAAILDAEHIDALVIAGDIFDTATPSPRSQA 70 Query: 62 LYNRFVVNLQQTGC-HLVVLAGNHDSVATLNESRDIMAFLNTTVVAS---AGHAPQILPR 117 Y +F+ + C H+++ AGNHDS A L+ RDI+ LN V+ + +L Sbjct: 71 QYYQFLCRIAAGNCRHVIITAGNHDSPAFLDAPRDILRALNVHVIGAAREPADEVLLLRD 130 Query: 118 RDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADA--CKLRGDQ 175 RDG P A++C +P+LR RD+ T+ AG + EK LL I +Y A A + Sbjct: 131 RDGAPEAIICAVPYLRERDLRTADAGESLAEKAGKLLDGIRAHYTAAVAHAETLRAAHGA 190 Query: 176 PLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFP-PADYIALGHIHRAQIIGGMEH 234 LP+IATGHL T G S+A D IGTL PA FP DY+ALGHIH AQ + E Sbjct: 191 DLPLIATGHLYTAGGQTSEA-HDHEIGTLAHVPASAFPAAIDYLALGHIHLAQRLDSNET 249 Query: 235 VRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLE 294 RY GSP+P +F E ++K V LVTF G+ +V L VP Q A L+GDL ++ AQ+ Sbjct: 250 RRYSGSPLPHTFAEAAQNKTVCLVTF-QGRSAAVRPLAVPDFQKRARLRGDLPALEAQIN 308 Query: 295 QWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQR 354 + +WL+I + ++ ++ ALT P+E+L ++ R + + + Sbjct: 309 ELAATGDN--IWLEIHYEGEAVEGGLRDRLHALTADTPLEILRLKNERIRERVLTQNTDS 366 Query: 355 ETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEH 398 ETL +L+ +VF R LA + Q+ L+ + L L + Sbjct: 367 ETLDDLNPLDVFERCLAAHHISADQRDALRQNYREILAGLDDDR 410 >UniRef50_A0AJ98 SbcD protein n=27 Tax=Bacillales RepID=A0AJ98_LISW6 Length = 374 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 101/394 (25%), Positives = 162/394 (41%), Gaps = 24/394 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ LHT+D HLG+ S AE + L + + A+ QVDA+I+AGD++D PP+ A Sbjct: 1 MKFLHTADLHLGKIVSGISILAEQEYILAQITKIAEEEQVDALILAGDLYDRAVPPADAV 60 Query: 61 TLYNRFVVNLQ-QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 + N +V + G + ++GNHDS L + + +P D Sbjct: 61 KVLNDILVKWNVELGIPIFAISGNHDSAERLAFGSQWYESSKLYMKGKCTSQFEAIPFMD 120 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 A + +P+ P I A N I + + A+T + + DQ Sbjct: 121 ----AEVWLVPYHEPAIIREVFAD-NTIRSFEDAMQAVTKQIRSKW--------DQTKAQ 167 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCG 239 I GH G SD+ R + IG +D F Y ALGH+H I + Y G Sbjct: 168 ILVGHAFVSGGIPSDSERQLAIGNVDRVSTDCFDGFTYTALGHLHHPHAIR-HPSIYYSG 226 Query: 240 SPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDV 299 SP+ SF E K V +V +L SV ++ M ++ G LA +T L Sbjct: 227 SPLKYSFSEANDVKSVRIVEIKGKELISVTERSLTPKHDMRIISGTLAELTENL------ 280 Query: 300 SQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSE 359 P + + + + L D K++ P + L R + +E + ++ + Sbjct: 281 VPNPNDFFQVNLMDEGALIDPMGKLRQF---YPNILHLERTKQTLKETEDSFEEIMKKDD 337 Query: 360 LSVEEVFNRRLALEELDESQQQRLQHLFTTTLHT 393 L + F + EL E+Q+Q+L +F Sbjct: 338 LELFGQFFEHVNGTELTETQKQKLVDVFEQARKE 371 >UniRef50_Q0HTQ0 Exodeoxyribonuclease I subunit D n=26 Tax=Gammaproteobacteria RepID=Q0HTQ0_SHESR Length = 400 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 95/393 (24%), Positives = 176/393 (44%), Gaps = 17/393 (4%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR +HTSDWH+G+ +++S + LD ++ A+ H VDA+I+AGD++D PP+ A Sbjct: 1 MRFIHTSDWHIGRQLHNQSLLEDQAYVLDQIVTLAEQHTVDAVIIAGDIYDRSIPPASAV 60 Query: 61 TLYNRFVVNL-QQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L + + L + G ++++AGNHD L + MA ++ + Sbjct: 61 ALLDEVLNRLITELGLQVLMIAGNHDGHERLGFAAKQMAASGLHIIGPLQADLTPIRLTS 120 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 + A P+P+ P + + L + + + + Q LP Sbjct: 121 SSGDAYFYPLPYAEPATVRQVFEAD-----AKGLGVSSHEEAMALLLEQVRSHDSQGLPK 175 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCG 239 + H G S+S++ R + IG D + F DY+ALGH+H Q G EHVRY G Sbjct: 176 VVVSHCFLDGGSESESERPLSIGGADKISPRLFSEFDYVALGHLHGPQ-YKGSEHVRYSG 234 Query: 240 SPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDV 299 S + SF E + K V LV + ++ L + + + +++G+LA + Sbjct: 235 SILKYSFSEQHQHKSVTLVDVTAHTPAQIQLLPLTALRDVRIIEGELAHLLD----LGKT 290 Query: 300 SQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLS- 358 + +L + + + D K++++ + VL + R+ + R+ + Sbjct: 291 DAKREDYLMVRLLDKHAILDAMGKLRSVYPN----VLHLERTGLMAGEQAVALNRDHIKK 346 Query: 359 -ELSVEEVFNRRLALEELDESQQQRLQHLFTTT 390 E+++ F +++ EEL ++QQ + + T Sbjct: 347 GEMAMFRDFFSQVSGEELSDAQQAVMDEILTKL 379 >UniRef50_A8FTM6 Nuclease SbcCD, D subunit n=25 Tax=Gammaproteobacteria RepID=A8FTM6_SHESH Length = 381 Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats. Identities = 93/398 (23%), Positives = 173/398 (43%), Gaps = 22/398 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ +HTSDWH+G+ +++S + + L +L A+ H+VDA+I+AGD++D PP+ A Sbjct: 1 MKFIHTSDWHIGRQLHNQSLIDDQRHILVQILALAEEHEVDAVIIAGDIYDRSIPPANAV 60 Query: 61 TLYNRFVVNLQQ-TGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L + V +L ++++AGNHD L + M+ ++ + + Sbjct: 61 ALLDDVVNSLVNVMKLPVIMIAGNHDGHERLGFASRQMSDSGLHIIGPLHKELSPITLKG 120 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 + AV +P+ P + G + + Q LP Sbjct: 121 KSGSAVFYGLPYADPATVRQVFDCEAGSH----------EQAMGVLLEQVHEHDSQGLPK 170 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCG 239 + GH G S+S++ R + IG D F P +Y ALGH+H Q G E VRY G Sbjct: 171 VVIGHCFLDGGSESESERPLSIGGADKISPTLFTPFNYTALGHLHGPQ-YKGEEQVRYSG 229 Query: 240 SPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDV 299 S + SF E + K V LV F + +E L + + + +++G+L+++ Sbjct: 230 SILKYSFSEQHQKKSVTLVDFDSQGKAQIELLPLTAKRDVRIVEGELSALLEA----GKT 285 Query: 300 SQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLS- 358 +L + + + D K++++ + VL + R+ + +R+ + Sbjct: 286 DPNCDDYLMVRLLDKHAILDAMGKLRSVYPN----VLHLERTGLMTDNGQLEIRRDHIKK 341 Query: 359 -ELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLA 395 EL + F +++ + ++E+QQQ + Sbjct: 342 GELDMFTEFFSQVSGDPMNEAQQQAMVQAIDELHKGEQ 379 >UniRef50_A9KNM2 Nuclease SbcCD, D subunit n=12 Tax=Bacteria RepID=A9KNM2_CLOPH Length = 375 Score = 288 bits (737), Expect = 2e-76, Method: Composition-based stats. Identities = 86/393 (21%), Positives = 158/393 (40%), Gaps = 22/393 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ +H SD H+G+ S + L +LE A + DA+++AGDV+D P Sbjct: 1 MKFMHLSDLHIGKRVNEFSMIEDQTYILQKILELADEEKPDAVLIAGDVYDKNLPTIEGV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 L + F+ +L + + +++GNHDS LN + I+ + + DG Sbjct: 61 NLLDDFLSDLHKRKIPVFMISGNHDSAERLNFASRILRNNEVYIAGTYQGEIARYTLNDG 120 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 + +PF++P G + + D + A A + + I Sbjct: 121 HGPVNIYLLPFVKPAIASVYHEG----------IESYHDAVKAILAAAKVNKAE---RNI 167 Query: 181 ATGHLTTVGASKS----DAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVR 236 H S D+ +I +G LD F +Y+ALGH+H Q I G + VR Sbjct: 168 LVAHQFVTAGDISPECCDSE-NISVGGLDNVDVSVFDDFEYVALGHLHGPQRI-GRDTVR 225 Query: 237 YCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQW 296 Y GSP+ SF E + K V +VT E + + + M LKG + + L Sbjct: 226 YAGSPLKYSFSEAKQKKSVTMVTIDTKGEIKQEYIPLIPLRDMRQLKGPIDEL---LNPK 282 Query: 297 RDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRET 356 + ++ +T +E ++D +I+++ ++ +++ L ++ Sbjct: 283 NYHNGNTKDYIHATLTDEEEIYDAIGRIRSIYPNVMRIEFDNSKTKPNETAKLVAEDVIR 342 Query: 357 LSELSVEEVFNRRLALEELDESQQQRLQHLFTT 389 L + E F + + + Q + ++ L Sbjct: 343 KDPLCLFEEFFKNQNNVSMSDEQNEIMKKLLFE 375 >UniRef50_A7VIT3 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VIT3_9CLOT Length = 385 Score = 288 bits (736), Expect = 3e-76, Method: Composition-based stats. Identities = 89/399 (22%), Positives = 163/399 (40%), Gaps = 17/399 (4%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M++ H SD H+G+ + + D +L + Q DA+++AGD++D P + A Sbjct: 1 MKLFHLSDLHIGKIVNGYEMWEDQRYVFDQILAYVREEQPDAVMIAGDIYDKAVPSAKAV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 T ++ F+ L +G +++++GNHDS L+ + IM N + + G + +D Sbjct: 61 TEFDEFLTELADSGTIILIISGNHDSAERLDFASSIMKKQNIYMKGTYGGEAMKVTMQDK 120 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 +PF++P ++ + + L +++ T+ QQ A + D + Sbjct: 121 WGDVNFYLMPFVKPSNVKNTLSDLTEEPEKESAALTYTEAMQQAVAAM---QVDPGKRNV 177 Query: 181 ATGHLTTVGA---SKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRY 237 H + +SD+ I IG LD F DY+ALGH+H Q I G +RY Sbjct: 178 LIAHQNVTNSGVNRRSDSET-ISIGGLDNIDRTVFDIFDYVALGHLHSPQQI-GKPEIRY 235 Query: 238 CGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWR 297 CG+P+ S E K V +V S+ L + G L ++ Sbjct: 236 CGTPVIYSMSEADDQKSVTVVELGEKGKLSIRELPLHQLHAWYNFTGTLDEAMSREAN-- 293 Query: 298 DVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETL 357 + I +T E + D+Q +++ + ++L + V + E+ + + L Sbjct: 294 ------EDYARIVLTDKETIIDVQARLRTVYKNL-MSVEFQMADGSRPEQERTLEDVKNL 346 Query: 358 SELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAG 396 + F R EL + ++ L G Sbjct: 347 APDEAFADFYNRKMKRELSDENAVYIRQLIRDYYEQRQG 385 >UniRef50_C9LQV4 Putative exonuclease SbcD n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQV4_9FIRM Length = 389 Score = 287 bits (735), Expect = 4e-76, Method: Composition-based stats. Identities = 88/395 (22%), Positives = 161/395 (40%), Gaps = 23/395 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLD-WLLETAQTHQVDAIIVAGDVFDTGSPPSYA 59 M+ +HT+DWHLG+ FY + E + L L + D I++AGDV+D PP+ A Sbjct: 14 MKFIHTADWHLGKLFYGEYLTEEQEWILKNQFLPLIDEEKPDVILLAGDVYDRSVPPAEA 73 Query: 60 RTLYNRFVVNL-QQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRR 118 L++ V + + +V++GNHDS L+ + I+ + H + + + Sbjct: 74 VELFDEMVSEITGKRKIPFIVISGNHDSAERLSFASRILRGTGLFLCGDLYHTLEPVVLK 133 Query: 119 DGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLP 178 D P+P+ P + + + + + ++D+ + A + Sbjct: 134 DDDGEVAFAPLPYAEPGKVREALSAD--VHTHEEAERVLSDFLLRQIGHAARK------- 184 Query: 179 IIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYC 238 +A H G S SD+ R + IG D A F P +Y ALGH+H Q GG E+VRY Sbjct: 185 -VAIAHEFVAGGSASDSERPLSIGGTDLISADIFAPYNYTALGHLHGPQQAGGKENVRYS 243 Query: 239 GSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRD 298 GS + SF E + K V + +++ + ++KG + Sbjct: 244 GSLLKYSFSEATQKKGVIVGEIDGAGQVKTTFISLSPRHDVRIIKGFFDDLIK------- 296 Query: 299 VSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLS 358 E +L E+ + + D +++ + R + ER + + + Sbjct: 297 --GESEDFLMAELLDEGPVIDAMARLRQKYPRMMTIQSHRRMNSGSGER--SFDLMKKVD 352 Query: 359 ELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHT 393 L + VF + +E E ++ ++ L+ Sbjct: 353 PLDMFRVFYKEFQDKEFTEEEENYMKELWEDLRKE 387 >UniRef50_A3XL99 Exonuclease SbcD n=1 Tax=Leeuwenhoekiella blandensis MED217 RepID=A3XL99_9FLAO Length = 405 Score = 287 bits (733), Expect = 6e-76, Method: Composition-based stats. Identities = 109/410 (26%), Positives = 188/410 (45%), Gaps = 15/410 (3%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHT+DWH+G+ + + + F+ WL+ Q ++ ++V+GDVFD +P + AR Sbjct: 1 MKILHTADWHIGKKLHKHYLYTDFERFISWLIAIIQEENIELVLVSGDVFDLANPSAEAR 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ----ILP 116 Y + + L C L++ GNHDS + L+ R+I+ LN ++ + + Sbjct: 61 KQYYKALKQLSNLNCKLIITGGNHDSPSMLDAPREILEALNVHILGGMPENLEDCLIPVQ 120 Query: 117 RRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQP 176 + V+ IPFLR DI +++G+ + + + I + Q + Sbjct: 121 GKQDNDKLVVAAIPFLRDGDIRAAESGVTYENRIEAIRKGIEAVFTQAAETC--KQKFPG 178 Query: 177 LPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPP-ADYIALGHIHRAQIIGGMEHV 235 LP+IA GHL G S++ RDI IG AF A F Y+ALGHIH+ Q + Sbjct: 179 LPVIAMGHLYAAGIEPSESERDIQIGNQAAFQASQFGEYFSYVALGHIHKPQRVSAAIPA 238 Query: 236 RYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQ 295 Y GSP+PLSF E K V ++ S G ++ +P + + + GDL I ++L+ Sbjct: 239 FYSGSPLPLSFSERTDEKRVLILNTSTGFEPK--SVAIPTFRKLNKVSGDLERIQSKLQT 296 Query: 296 WRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLP---VEVLLVRRSREQRERVL--A 350 E +++E+ + + ++ L +E++ R + + R + Sbjct: 297 LTPEG-ELTNLIEVELIEENFDAHRIAQLDTLVTEFDTPGLEIVKHRATFKNRLKATGKL 355 Query: 351 SQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHEA 400 ++ L +L EVF + L DE + ++ F + L A Sbjct: 356 FDAQQHLEDLKPLEVFTKMLEQNSYDEETKTQVTLAFQELVEHLNTADPA 405 >UniRef50_UPI0000E0E5D5 exonuclease subunit SbcD n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0E5D5 Length = 471 Score = 287 bits (733), Expect = 7e-76, Method: Composition-based stats. Identities = 170/418 (40%), Positives = 240/418 (57%), Gaps = 22/418 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M I+HTSDWHLGQ+F ++SR+AEHQ FLDWLL Q H +DA+IVAGD+FDT SPPSYAR Sbjct: 1 MNIIHTSDWHLGQSFINQSRQAEHQQFLDWLLTQVQAHAIDAVIVAGDIFDTTSPPSYAR 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVAS-----AGHAPQIL 115 +Y+ F+ + +T C LV+L GNHDSVA LNES + LNT ++ + A I Sbjct: 61 EMYHEFIGQIFKTDCTLVILGGNHDSVAVLNESLPLFKSLNTHMIPNSLSDPADQVVTIP 120 Query: 116 PRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQ 175 R+ G GA++C IPFLR RD++ + G +KQ L AITD+Y+ YA A R Sbjct: 121 DRKTGAVGAIVCAIPFLRQRDLVVTHTGEGDEDKQARLKHAITDHYEAVYAAAVAKRDAL 180 Query: 176 P--LPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGME 233 +PIIATGHLT VGA S++ RDIY+G L+ +P + FPPADYIALGHIHR Q + Sbjct: 181 GLSVPIIATGHLTAVGAKVSESERDIYVGNLENYPKEAFPPADYIALGHIHRPQAVSASR 240 Query: 234 HVRYCGSPIPLSFDECGKSKYVHLVTFSNGK-----------LESVENLNVPVTQPMAVL 282 H+ Y GSPI LSFDE +K V ++F+ + +L +P Q M VL Sbjct: 241 HIYYSGSPIYLSFDELSYTKRVIKLSFNEHADSTHPNDQPAFTPQLTSLEIPCFQAMQVL 300 Query: 283 KGDLASITAQLEQ---WRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVR 339 G ++ I A ++ + P W+ ++I + ++ I + V + + Sbjct: 301 SGSVSEIIADIQSFPLCPPEDKSPMTWVMVKINDPAFQGNVANTINEAAKGRAVVITKIM 360 Query: 340 RSREQRERVLASQQRETLSELSVEEVFNRRLALEEL-DESQQQRLQHLFTTTLHTLAG 396 R R+ + L+SQ +E L +L+ +VF +R+ + D LQ L+ T + + Sbjct: 361 RERDHSRQSLSSQDQENLDDLTPMDVFAKRIERAPVADHIDANALQQLYRTVVDNVNQ 418 >UniRef50_Q1VZW8 Exonuclease SbcD n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=Q1VZW8_9FLAO Length = 403 Score = 286 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 115/408 (28%), Positives = 203/408 (49%), Gaps = 14/408 (3%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHT+DWH+G+ + K + F+DW+ + + +D ++V+GDVFD +P S +R Sbjct: 1 MRILHTADWHIGKKLHKKELYQDFDLFIDWMCQFLPENDIDILLVSGDVFDFSNPSSESR 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ---ILPR 117 T Y R ++ L++ +++ GNHDS + L + I+ L+ V+ Q I Sbjct: 61 TQYYRTLIKLKKFDLKIIITGGNHDSPSVLEAPKAILNELDIHVIGQRPENLQDCLIPIY 120 Query: 118 RDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPL 177 +D V+ +P+LR RD+ N KQ+ + +I ++Q+ + A K D + Sbjct: 121 KDENVDLVIAALPYLRNRDLQERFDAENHDSKQKAVQQSIAYHFQEAASLAKKKYPD--V 178 Query: 178 PIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNF-PPADYIALGHIHRAQIIGGMEHVR 236 P++ GHL G S SD+ R+I IG L A +F YIALGHIH+ Q + + + Sbjct: 179 PLLGMGHLFAKGVSLSDSEREIQIGNLAGLDASHFGSNYSYIALGHIHKPQRLNSLTPIF 238 Query: 237 YCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQW 296 Y GSP PLSF E K + L+ S E++++P + + ++KG L I +L + Sbjct: 239 YSGSPTPLSFSERKNEKRILLIDTSKSFEP--ESISIPKFRDLILVKGSLEKIKQKLSEI 296 Query: 297 RDVSQEPPVWLDIEITTDEYLHDIQRKIQ---ALTESLPVEVLLVRRSREQRERVLA--S 351 ++ ++IE+ + + +++ E+ E++ R S + + L + Sbjct: 297 TNIHP-LQTLIEIEMEEENFSPSKTIELEEYIETFENEACEIVKHRVSFKYKPEGLRGIT 355 Query: 352 QQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHE 399 E +S+ + EVF+++L + E+ ++ L F L L + Sbjct: 356 STEEQISDFTPLEVFHKKLESVDETETSKEELISAFEEILDELNRPEQ 403 >UniRef50_B8I3W2 Nuclease SbcCD, D subunit n=5 Tax=Clostridium RepID=B8I3W2_CLOCE Length = 388 Score = 285 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 87/396 (21%), Positives = 161/396 (40%), Gaps = 20/396 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+I+HT DWH+G+ S + + L+ L+ + + DA+I+AGD+FD PP A Sbjct: 1 MKIIHTGDWHIGKIVNEFSMLEDQEYILNQLISVIENEKPDALIIAGDIFDRSIPPVDAV 60 Query: 61 TLYNRFVVN-LQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L ++ L + +AGNHDS L+ + I+ + S + + D Sbjct: 61 ELVDKVFNIVLLDLRVPIFAIAGNHDSAERLSFASRILTNNGLHIAGSFDGNIRKVILED 120 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 G IP+ PR I N I + + + Q ++ Sbjct: 121 GFGPVNFYLIPYSDPRTIRNILQD-NEISTHDDAMKKLVEKVGQ--------AENENKRS 171 Query: 180 IATGHLTTV--GASK---SDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEH 234 + H G S++ R + IG D + F Y ALGH+H Q G ++ Sbjct: 172 VMITHGYITYMGGQADIISESERPLSIGGTDIVNSNYFNSFSYTALGHLHAPQR-AGADN 230 Query: 235 VRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLE 294 +RY GS + SF E + K +++V V+ + + M ++KG L + L+ Sbjct: 231 IRYSGSLLKYSFSEVNQKKGINVVEIDGDGNSCVKLTELKPKRDMRIIKGPLEEL---LK 287 Query: 295 QWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQR 354 ++ +T L D K++++ ++ + SR+ + AS+ Sbjct: 288 SEVYKDTNTDDYIYAILTDKGELIDPISKLRSVYPNVMGLTKEIGISRD-DNKTSASEGY 346 Query: 355 ETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTT 390 ++ S+L + + F + E L + + ++ + Sbjct: 347 KSKSKLELFQEFYSSIQGEPLSFEELKIIEKVIGEV 382 >UniRef50_Q0K4S8 DNA repair exonuclease, SbcD n=6 Tax=Bacteria RepID=Q0K4S8_RALEH Length = 395 Score = 284 bits (726), Expect = 4e-75, Method: Composition-based stats. Identities = 95/394 (24%), Positives = 167/394 (42%), Gaps = 20/394 (5%) Query: 2 RILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYART 61 R LHT+DWHLG+ F+++S + LD +E +T + DA+++AGDV+D PP A Sbjct: 15 RFLHTADWHLGRLFHARSLLEDQAHILDQFVELVRTERPDAVLIAGDVYDRAVPPPEAVA 74 Query: 62 LYNRFVVNLQ-QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 L + + + TG +V++AGNHDS L +M V A + D Sbjct: 75 LLDDVLGRIVIDTGVPVVMIAGNHDSAQRLGFGARLMRAQGLHVAGRTLAAAACVTLHDT 134 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 + +P+ P + + + + DA + + + Sbjct: 135 HGEVRIYALPYAEPAVVRDAMGTDLPSH----------EAALRAQLDAIRAVHPPGVRAV 184 Query: 181 ATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGS 240 GH VG + S++ R + +G A A F D +ALGH+HR Q +GG V Y GS Sbjct: 185 VVGHAFVVGGAASESERPLSVGGSGAVAADLFAGFDLVALGHLHRPQTLGG-GRVHYAGS 243 Query: 241 PIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVS 300 + S EC K V + ++ + + + + V++G+LA++ A Sbjct: 244 LLKYSLSECAHDKSVSRIELGADGAVAITPVPLQALRDVRVVEGELAAVLAA----GVDD 299 Query: 301 QEPPVWLDIEITTDEYLHDIQRKIQALTES-LPVEVLLVRRSREQRERVLASQQRETLSE 359 + ++ +T L D +++ + + L +E ++ R+ E A ++ L Sbjct: 300 PQRDDYIHARLTDTGALLDPMARLRQVYPNALAIERTVLARTGTASE---AGRKLRQLGT 356 Query: 360 LSVEEVFNRRLALEELDESQQQRLQHLFTTTLHT 393 + F R +A EL+ Q+ L + T Sbjct: 357 GELFANFFREVADAELEPDQRAVLDQVLTGIAAA 390 >UniRef50_A9BEV6 Nuclease SbcCD, D subunit n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BEV6_PETMO Length = 374 Score = 283 bits (725), Expect = 6e-75, Method: Composition-based stats. Identities = 87/389 (22%), Positives = 158/389 (40%), Gaps = 26/389 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ +HT+DWHLG+ YS + + LD L D +++AGD++D G PPS A Sbjct: 1 MKFVHTADWHLGKIIYSNYMTLDQKYILDNFLAYLSKTPPDVLLIAGDLYDRGIPPSEAV 60 Query: 61 TLYNRFVVNLQ-QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L N + + ++++GNHDS L I++ +N + + + + D Sbjct: 61 NLLNEVLSKIVLGLKIPTLIISGNHDSDERLEFLNGILSNMNLHIEGTLKKEVKKITFND 120 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 +P++ + + Q +HY D+ L D+ Sbjct: 121 EYGPVNFFMLPYVDSQKAGDIFETNFEDKTQ----------LLKHYLDSIDL--DEDERN 168 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCG 239 + H G S++ R + IG + F DY+ALGH+HR Q I ++ Y G Sbjct: 169 VLIAHEYIKGGLNSESERPLTIGGSEYVDPDIFEKFDYVALGHLHRPQKIK---NIYYSG 225 Query: 240 SPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDV 299 S + SF E K ++LV VE L+ + M +++G I Sbjct: 226 SLLKYSFSEADHIKGMNLVEMKEKGNIKVEKLSFKTAKDMKIIRGSFDDIMKM------- 278 Query: 300 SQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSE 359 + +L I + + ++D K++A + V L + E +S Sbjct: 279 -ESSEDYLQIILENTKPVYDAINKLRAKFPN--VLSLDFPNLKTNDEIKTRDYNIRKISP 335 Query: 360 LSVEEVFNRRLALEELDESQQQRLQHLFT 388 + + ++F + + +EL ++Q + +F Sbjct: 336 VDLFKLFYQEVKNQELSFEEKQIVTSIFN 364 >UniRef50_C9M6Q6 Nuclease SbcCD, D subunit n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M6Q6_9BACT Length = 400 Score = 283 bits (724), Expect = 9e-75, Method: Composition-based stats. Identities = 116/405 (28%), Positives = 197/405 (48%), Gaps = 12/405 (2%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLG+ + + ++F WL+ + +VDA++V+GDVFD+ +PP +A+ Sbjct: 1 MKILHTSDWHLGKRLFGHNLREASESFCSWLVGLLEAERVDALLVSGDVFDSSTPPLWAQ 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA----PQILP 116 Y ++ ++ +VV +GNHDS L + + L V ++ Sbjct: 61 RCYFDVLLKARELCRAVVVTSGNHDSAEFLEITGIPLRELGIFVFGRPAEDLTEQVVMVQ 120 Query: 117 RRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQP 176 P ++ PFL D+ + + ++ + + YA A + + Sbjct: 121 NASSEPVGLVAAQPFLHESDLHRGSSLEDIEALREETYRCAQSRFAELYA-ASRALNPER 179 Query: 177 LPIIATGHLTTVGAS--KSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEH 234 LP++ HL VGA + D +RD+ IG LDAF + DY+ALGH+HRAQ + G E Sbjct: 180 LPVVCMAHLFAVGAKVGEGDGMRDLAIGGLDAFDCRALAGFDYVALGHVHRAQNVVG-EA 238 Query: 235 VRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLE 294 VRY GSP+ L F + G K + +V S G+ V + VP +A L G A I +L Sbjct: 239 VRYSGSPLALGFGDAGAVKTLSIVDVSAGETPIVREIPVPPFVKLARLSGSFAEILERLA 298 Query: 295 QWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQR 354 + ++ PVW+++ ++ D+ + Q + PVE+L V + + + Sbjct: 299 EL--TAKGEPVWVELTLSEPSRGRDLWSEFQQTAQDSPVEILCVHVPDDPAATLASCP-- 354 Query: 355 ETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHE 399 + L E+S EVF + + ++ ++++ L+ LF + L E Sbjct: 355 QQLEEMSPTEVFRKLMEETGVESARRESLETLFNRFVQELDAGSE 399 >UniRef50_B0TDB7 Exonuclease sbcd n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TDB7_HELMI Length = 387 Score = 282 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 93/396 (23%), Positives = 160/396 (40%), Gaps = 22/396 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHT+DWHLG+ F+ + A LD ++ + + A+IVAGD++D PP A Sbjct: 1 MRILHTADWHLGRIFHQVHMTEDQAAVLDQFIDLIKDRRPHAVIVAGDIYDRSVPPVDAV 60 Query: 61 TLYNRFVVN-LQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L + + L ++++AGNHDS L + A + +P D Sbjct: 61 RLLDEVITRILLDHRTAVIMVAGNHDSADRLGFGNRLFAGRGFHLFGRLDRDMAPIPVED 120 Query: 120 GTPGAVLCPIPFLRPRDIITSQ-AGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLP 178 T CPIP+ P + + + + L + D+ R Sbjct: 121 ETGPVWFCPIPYAEPALVRETFGSSPEAVRGHNEALRVLADHMSA--------RTPAGAR 172 Query: 179 IIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYC 238 IA H G +S++ + +G F Y ALGH+HR Q G + +RY Sbjct: 173 RIAVAHAFVTGGEQSESESFLTVGGAGTVDGSIFEGFHYTALGHLHRPQH-CGHDRIRYS 231 Query: 239 GSPIPLSFDECGKSKYVHLVTFS-NGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWR 297 GS + SF E K + V G++ + E++ + + + L+G L I Sbjct: 232 GSLLKYSFSEADHQKGITFVELDGAGQITACESIALTPRRDVRRLEGYLNDILKGA---- 287 Query: 298 DVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQR--ERVLASQQRE 355 + ++ + + + + D KI+ + + VL ++R+ +R V + Sbjct: 288 APGENRQDYVMVTLLDEGAILDPIGKIRQVYPN----VLHIQRTFLERGSGAVRSVGDHR 343 Query: 356 TLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTL 391 L +L + F ++ LDE +Q + L Sbjct: 344 RLDDLDLFASFMEQVTGSPLDEEGRQVAADVIDDVL 379 >UniRef50_D2NSE3 DNA repair exonuclease n=1 Tax=Rothia mucilaginosa DY-18 RepID=D2NSE3_9MICC Length = 409 Score = 280 bits (717), Expect = 5e-74, Method: Composition-based stats. Identities = 99/397 (24%), Positives = 169/397 (42%), Gaps = 18/397 (4%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLG+ F+ EHQ F+D LL +D ++++GDV+D+ P + + Sbjct: 17 MKILHTSDWHLGRTFHRSPLTREHQQFIDELLNYVHAEGIDTLLISGDVYDSTIPTAEST 76 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 TL ++ + L + G +++ +GNHDS L+ + S A + + DG Sbjct: 77 TLLDQALTRLMRAGVQVILSSGNHDSFRRLSYGAAFFEASGVHLRTSLEDATRPVELTDG 136 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 T + IP+L P L +L A+TD + A+ RG+ II Sbjct: 137 TLRVHVYAIPYLAP---RLHATALGVDPTHHAVLGAVTDAIRTDAAERHA-RGEGADRII 192 Query: 181 ATGHLTTVGASK-------SDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGME 233 H T + SD+ RDI +G +D PA F DY+ALGHIH+ + Sbjct: 193 VMSHATVSDTASSADTTPRSDSERDISVGGIDWVPASLFDGFDYVALGHIHKRYPV--TH 250 Query: 234 HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQL 293 +RY GSP+ SF E +L+ + G+ ++ M L+G + + Sbjct: 251 TIRYSGSPLGFSFSEEHNRNGAYLIELTPGEEPTISGHEWATRVHMKTLRGTMEQLLNSP 310 Query: 294 EQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQ 353 E E + IE+T + ++++ E + R ++ E+ +A Sbjct: 311 E---HTDYEHGYYCRIELTDETLPVGAVDRLRSRYE--TISHFSYRSTQPAAEKPVAVPL 365 Query: 354 RETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTT 390 + + F++ + L ++ + L Sbjct: 366 TRDADPVETFDQFHQYVRNRPLTSEERDVITTLSDHI 402 >UniRef50_D2RLP4 Nuclease SbcCD, D subunit n=2 Tax=Acidaminococcus RepID=D2RLP4_ACIFE Length = 380 Score = 280 bits (715), Expect = 7e-74, Method: Composition-based stats. Identities = 95/395 (24%), Positives = 164/395 (41%), Gaps = 21/395 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR LHTSDWHLG+ F+ + +A LD +L+ A+ ++VDA++VAGDV+D PP+ A Sbjct: 1 MRFLHTSDWHLGRIFHGLHLLEDQRAALDQILDLAREYRVDALLVAGDVYDRAVPPTEAV 60 Query: 61 TLYNRFVVNLQ-QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L + + L +++AGNHD+ LN + + A + A + D Sbjct: 61 NLLDETLRRLVLDLKIPALLIAGNHDNPDRLNFGQALFAARQLYITGPVDPAAHPVVLED 120 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 P+P+ P + ++ + L + + + Sbjct: 121 ADGPVYFAPLPYCEP--LTATELSGEKKPTHEAALQWQVETILRQIPSRARK-------- 170 Query: 180 IATGHLTTVGASKS-DAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYC 238 +A H+ GA + D+ R + G F Y ALGH+H Q +RYC Sbjct: 171 VALAHVFLTGARTTPDSERPLAAGGATTVSMDCFRDFHYTALGHLHACQ--NNSPRIRYC 228 Query: 239 GSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRD 298 GS + SF E + K VH+V SVE + + +AVLKG+ + Sbjct: 229 GSLLKYSFAEASQKKAVHIVDLDAKGDVSVETVPLTAPHELAVLKGEFRDLLE-----NP 283 Query: 299 VSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLS 358 + +L I++T + D + +++ + + L R + + A+ QR+ LS Sbjct: 284 RTDHLQDYLQIQLTDGVPILDAKHRLEQVYPQ--ILQLGYERLQPLEKEETATAQRKGLS 341 Query: 359 ELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHT 393 + + F R + +L E ++ + Sbjct: 342 TDDLFQAFFREVQGRDLTEGEKALFHQIADEVSQE 376 >UniRef50_C4V2E2 Exonuclease SbcD n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V2E2_9FIRM Length = 381 Score = 280 bits (715), Expect = 9e-74, Method: Composition-based stats. Identities = 88/398 (22%), Positives = 155/398 (38%), Gaps = 18/398 (4%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR +HT+DWHLG+ F + + L+ LL + + DA+++AGDV+D PP A Sbjct: 1 MRFIHTADWHLGKLFGQRHMTEDQAYVLEELLALCRDVRPDALVLAGDVYDRAVPPPEAV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 L+N + L + G ++ +AGNHDS L ++ + + + D Sbjct: 61 ALFNTVLTRLAEQGIKVLCIAGNHDSAVRLAFGAQLLQSSGVYIAGTLDAEAAPVVLSDA 120 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 +P+ P I S + L I + Q + Sbjct: 121 FGDVYFSLLPYGDPPHIRESFSLDETPSFDTALDVQIAS---------SRAMIPQGARSV 171 Query: 181 ATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGS 240 A H +G S++ + +G D A F P +Y ALGH+H Q G E +RY GS Sbjct: 172 AVAHAFVIGGQTSESEHTLSVGGSDQVHADKFRPYNYTALGHLHAPQR-AGAEQIRYAGS 230 Query: 241 PIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVS 300 + SFDE + K V LV S + + +++G +A I + Sbjct: 231 LLKYSFDESHQKKGVTLVDIDAAGAVSHTFYPLVPRHDVRIVRGKMAEIMSD----EFDP 286 Query: 301 QEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQ-RETLSE 359 ++ +E+T + + K++ + P L+ R + + S+ Sbjct: 287 LSHEDYICVELTDTDAVLAAHEKLRRV---YPNLFLITRPNIHMGHSSNEVRNYERGKSD 343 Query: 360 LSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGE 397 L + F + E++ + + + L H+ + Sbjct: 344 LHLFADFYAEMTTEKMTQEETEELTHIIDALEREERMQ 381 >UniRef50_A3WLK0 Exonuclease SbcD, putative n=1 Tax=Idiomarina baltica OS145 RepID=A3WLK0_9GAMM Length = 382 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 95/394 (24%), Positives = 174/394 (44%), Gaps = 17/394 (4%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLG+ F+ +S + L ++E VDA+I+AGD++D PPS A Sbjct: 1 MKILHTSDWHLGRLFHQQSLLEQQIELLQQIVEIIDQQAVDAVIIAGDIYDRSVPPSAAI 60 Query: 61 TLYNRFVVNLQ-QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 + +N F+ + ++ ++GNHD L + ++ N +V A + + D Sbjct: 61 SAFNDFIEEVAVSRQKTIIAISGNHDGAERLGFATSLLKQSNLHLVTELPQALEPIVLND 120 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 + +PF P + H Q D + Sbjct: 121 SATTIDIWCVPFHDPLQVNNWLDTDCKEFNTAH----------QMIVDRINAERNPAHLN 170 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCG 239 + H GAS+S++ R + IG D Q F DY ALGH+H+ Q GMEH+RY G Sbjct: 171 MIVSHCYLDGASESESERPLSIGGADRVDWQLFKDFDYAALGHLHQPQH-KGMEHIRYSG 229 Query: 240 SPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDV 299 S + SF E +SK + L+ + +++++ +++ ++ M VLKG LA + AQ E Sbjct: 230 SLMKYSFSEVNQSKSITLLDVNEKGVQNIQQISLKPSRDMRVLKGTLAELIAQAEH---- 285 Query: 300 SQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSE 359 + ++ +T + + K++A +L +++ + ++ + Q++ ++ Sbjct: 286 DPQRNDFIQAILTDKQAILYPMAKLRAHYPNL-MQLRKEQLEHIRKASDTSGQEQLKKAD 344 Query: 360 LSVEEVFNRRLALEELDESQQQRLQHLFTTTLHT 393 + F + L+ Q+ + + Sbjct: 345 SELIHDFFTEVYGTPLNADQKASINQVIQQIEQE 378 >UniRef50_A7VZC9 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VZC9_9CLOT Length = 384 Score = 278 bits (711), Expect = 2e-73, Method: Composition-based stats. Identities = 84/404 (20%), Positives = 152/404 (37%), Gaps = 26/404 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWL-LETAQTHQVDAIIVAGDVFDTGSPPSYA 59 M+ +HTSDWHLG+ Y +S + + F+ + L Q D +I+AGD++D P A Sbjct: 1 MKFIHTSDWHLGKMIYGRSLLEDQEYFIKQVFLPAVDREQPDFVILAGDIYDRQIAPVEA 60 Query: 60 RTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L++ V + +++GNHD L ++ + A A + + Sbjct: 61 IRLFDWTVSEMAGREVPFFLISGNHDGADRLCVGARLLRKSGIYLTARLEDAFEPILLEK 120 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 + +P+ P + + + ++ Y+ + + R D LP Sbjct: 121 NGESVQIFLLPYFEPAEARDVLGDDS--------IRGFSEAYEAVLSRLEEKR-DPALPS 171 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCG 239 + H G++ SD+ +Y+G A F Y ALGH+H Q G Y G Sbjct: 172 VLVSHCFVAGSTASDSESTLYVGGSGEVGAGCFRNFTYAALGHLHGPQKAGANGW--YSG 229 Query: 240 SPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDV 299 SP+ SFDE + K +VT G + V +PM L + + ++ Sbjct: 230 SPLCYSFDEEKQKKGCTVVTL-KGYETDCRQVPVVPMRPMRTLTAAFDQLMEEGKK---- 284 Query: 300 SQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETL-- 357 ++ + +T D+ ++ +++ +L ++ Q++ L Sbjct: 285 -SPCQDYVFLTLTDDKPVYMPVDQLREYYPNLLGLTSQWLQNGGLEGLTGEQQEKRELLK 343 Query: 358 --SELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHE 399 E + F + E Q LF L + E E Sbjct: 344 RGGEKEIFSAFLTSVCQSGATEEDQA----LFDQILAQVGREAE 383 >UniRef50_A5EW10 Exonuclease SbcD n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EW10_DICNV Length = 396 Score = 278 bits (711), Expect = 2e-73, Method: Composition-based stats. Identities = 132/403 (32%), Positives = 208/403 (51%), Gaps = 12/403 (2%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILH++DWHLG + +SRE+E QAFLDW LET Q D +++AGD+FDT +PP A+ Sbjct: 1 MKILHSADWHLGAKLHGQSRESEQQAFLDWFLETLARVQPDILLLAGDIFDTATPPVSAQ 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGH--APQILPRR 118 Y F+ Q +V++AGNHDS A L+ + ++A + VV A A + Sbjct: 61 RQYYHFLYQAAQQCDAIVIIAGNHDSAAFLDAPQALLANMQIYVVGQAPQNAAEAVFALE 120 Query: 119 DGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLP 178 A++ +PFLR RDI +Q G + +K + + YYQQ A KLR P Sbjct: 121 TKNGRAIVAAVPFLRERDIRCTQVGESLADKASAIADGVRQYYQQAAEQAQKLRRGS-EP 179 Query: 179 IIATGHLTTVGAS--KSDAVRDIYIGTLDAFPAQNFPP-ADYIALGHIHRAQIIGGMEHV 235 +IA GHL G D VRD+++G L A FP DY+ALGH+H Q++ + Sbjct: 180 LIALGHLFAAGGKTTDHDGVRDLFVGKLGHLSATIFPQCFDYVALGHLHLPQMVAQNPRI 239 Query: 236 RYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQ 295 RY G+P+ + F E K++ + F + ++ + VPV Q + L+G ++ A++E Sbjct: 240 RYSGAPLMMGFGESVSEKHIVQLHFHE-RQPIIDAITVPVWQKLRQLRGRQETVIAEIEA 298 Query: 296 WRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRE 355 + E VWL+I I + + ++Q L + V++L +++ Q S R+ Sbjct: 299 LLN--DEAAVWLEIIIEEGVFDSALNARLQDLVANTSVKILRIQQPSTQDFVAALSDTRQ 356 Query: 356 TLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEH 398 +EVF +RL ++ ++ +L F T L + H Sbjct: 357 L---YEPQEVFAQRLEKTPFNDVEKAQLTADFLTILQQVHDAH 396 >UniRef50_UPI0001C366D6 nuclease SbcCD, D subunit n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C366D6 Length = 384 Score = 278 bits (710), Expect = 3e-73, Method: Composition-based stats. Identities = 85/397 (21%), Positives = 159/397 (40%), Gaps = 19/397 (4%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR +HTSD H+G+ S E A L + + + Q DA++++GD++D PP+ A Sbjct: 1 MRFIHTSDLHIGKTVGGFSMLEEQDAALKQITDYVKERQADAVLLSGDLYDRSVPPAAAV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 T+++ F+ L + G ++ +AGNHD + + I+ + + + D Sbjct: 61 TMFDLFLTGLSELGVTILAIAGNHDCGERIGFANRILEKRGLYLEGKLEDPVRFVDIPDQ 120 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 + PF RP ++ + + ++ + I + I Sbjct: 121 WGAVRVHLAPFARPAEVKSLYRCGSSMKTFEESFEEILRHV----------TYSPGGRDI 170 Query: 181 ATGHLTTVG----ASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVR 236 H V SD+ + +G D A F P Y ALGHIH Q IG V Sbjct: 171 LMAHQFVVNQGLLPELSDSETRVSVGGTDQVEAALFQPFCYTALGHIHGCQQIGKQP-VY 229 Query: 237 YCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQW 296 Y GSP+ SF EC K V S+E L + M ++G L+ + L + Sbjct: 230 YSGSPVKYSFSECSHQKSVLYGEVGKDGKVSLERLPLTPVHDMRKIRGRLSDLI--LPEV 287 Query: 297 RDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRET 356 + +P ++ +T + L D ++++ ++ +++ +R+ EQ V+ + Sbjct: 288 VSAA-DPEDYILAVLTDETELLDPIGTLRSVYPNI-MQLKWEKRALEQDGSVIHEDIMKE 345 Query: 357 LSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHT 393 + F + + + + Q+ ++ Sbjct: 346 KGPYELFADFYELVTGKAMTKEQEAVMRETAEQAEEE 382 >UniRef50_B5I7A7 Exonuclease n=3 Tax=Actinomycetales RepID=B5I7A7_9ACTO Length = 399 Score = 277 bits (709), Expect = 4e-73, Method: Composition-based stats. Identities = 87/399 (21%), Positives = 151/399 (37%), Gaps = 23/399 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR LHTSDWHLG+ F+++ +AFLD L+ TA+T VDAI+VAGD++D P A Sbjct: 1 MRFLHTSDWHLGRRFHTEDLIPAQRAFLDHLVGTARTEDVDAILVAGDIYDRAIPSLDAV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 L+NR + L +++++GNHDS L ++A + + D Sbjct: 61 RLFNRALHQLADLDVPIIMISGNHDSAHRLGVGSGLLARAGIHLRTDPDTCDIPVLLEDA 120 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 + IP+L P + + +E + A+ + Sbjct: 121 DGPVAVYGIPYLEPSMVR------DRLEAEAVSHRAVLTAALDRIHADLTNNQPAGTRSV 174 Query: 181 ATGHLTTVGASKSD----------AVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIG 230 H + + R+I +G + A F DY+ALGH+H Q + Sbjct: 175 VLAHAFVTSGTGQPEERDESEESTSEREIAVGGVAHVGADVFAGIDYVALGHLHGPQRV- 233 Query: 231 GMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASIT 290 + + Y GSP+ SF E +K V LV + + ++ PV + + G + + Sbjct: 234 -TDRIHYSGSPLAYSFSEARHTKSVTLVDLTPNAVPALARQPCPVPLRLERVSGFMEDLL 292 Query: 291 AQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLL-VRRSREQRERVL 349 + WL++ +T + +++ + Sbjct: 293 TNPDH----EPLKDAWLEVTLTDTALPFEAMARLRRRFPHTASLKHKPALIPAQATNTPT 348 Query: 350 ASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFT 388 SQ+ +L + F + + +Q LQ Sbjct: 349 YSQRIRGRGDLDIAGDFINSMRGTDPTPDEQNLLQQAVE 387 >UniRef50_A0LM47 Exodeoxyribonuclease I subunit D n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LM47_SYNFM Length = 383 Score = 276 bits (706), Expect = 8e-73, Method: Composition-based stats. Identities = 89/400 (22%), Positives = 164/400 (41%), Gaps = 21/400 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHT+DWHLG+ F+ A+ LD L+ A + D ++V+GDV+D PP A Sbjct: 1 MRILHTADWHLGRIFHGVHLTADQAFVLDRLVRLASESKPDVVLVSGDVYDRAVPPPDAV 60 Query: 61 TLYNRFVVNLQ-QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L + + L ++++AGNHDS L+ ++A + + + D Sbjct: 61 ALLDDTLSRLVLGLRIPVILIAGNHDSPERLSFGSKVLAAQCLHLAGTPAPDATPVVIDD 120 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 C +P+ P + + ++ D ++ + R Sbjct: 121 RHGPVSFCSLPYAEPALVRERLDRKDVVD---------HDSAMAAQIESARRRLPAGSRA 171 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCG 239 + H G +S++ R + +G A ++F Y ALGH+HR Q G +HV+Y G Sbjct: 172 VLVAHAFVAGGIESESERSLSVGGAAAVGVEHFEGFHYAALGHLHRPQR-AGADHVQYAG 230 Query: 240 SPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDV 299 S + SF E G++K V+LV +VE + + + + ++G + A Sbjct: 231 SLLCYSFAEAGQTKSVNLVELDAAGRCAVERIPLAPSHEVRCIRGAFRELLAGPRA---- 286 Query: 300 SQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSE 359 ++ ++ +T E + D ++ + +L + E A++ LS+ Sbjct: 287 AESREDYIMAVLTDKEPILDAHGRLSEIYPNL--LHIERSHLAAAGETGGAARDHRRLSD 344 Query: 360 LSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHE 399 L + F ++ +EL Q + + + L Sbjct: 345 LELFRAFFSQVTGDELTPEQAE----AYAEIVENLRRAER 380 >UniRef50_C6R472 Exodeoxyribonuclease I subunit D n=1 Tax=Rothia mucilaginosa ATCC 25296 RepID=C6R472_9MICC Length = 398 Score = 276 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 96/402 (23%), Positives = 170/402 (42%), Gaps = 23/402 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLG+ F+ EHQ F+D LL ++ ++++GDV+D+ P + + Sbjct: 1 MKILHTSDWHLGRTFHRSPLTREHQQFIDELLNYVHAEGINTLLISGDVYDSTIPTAEST 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 TL ++ + L + G +++ +GNHDS L+ + S A + DG Sbjct: 61 TLLDQALTRLMRAGVQVILSSGNHDSFRRLSYGAAFFEASGVYLRTSLEDATCPVELTDG 120 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 T + IP+L P L Q +L +TD + + RG+ II Sbjct: 121 TLRVHVYAIPYLAP---RLHATALGVDPTHQAVLGTVTDAIRADAVERHA-RGEGADRII 176 Query: 181 ATGHLTTVGASK------------SDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQI 228 H T + SD+ RDI +G +D PA F DY+ALGHIH+ Sbjct: 177 VMSHATVSDTTGSDIAGSADTTPRSDSERDISVGGIDWVPASLFDGFDYVALGHIHKRYP 236 Query: 229 IGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLAS 288 + +RY GSP+ SF E +L+ + G+ ++ + M L+G + Sbjct: 237 V--THTIRYSGSPLGFSFSEEHNRNGAYLIELNPGEEPTISSHEWATRVHMKTLRGTMDQ 294 Query: 289 ITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERV 348 + E + E + IE+T + ++++ E + R ++ ++ Sbjct: 295 LLNSPE---NSPYEQGYYCRIELTDETLPVGAVDRLRSRYE--TISHFSYRSTQPATDKP 349 Query: 349 LASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTT 390 +A+ + + F++ + L ++ + L Sbjct: 350 VAAPLTRDADPVETFDQFHQYVRNRPLTSEERDVITTLSDHI 391 >UniRef50_C1I2I4 Nuclease SbcCD n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I2I4_9CLOT Length = 389 Score = 275 bits (702), Expect = 3e-72, Method: Composition-based stats. Identities = 76/397 (19%), Positives = 155/397 (39%), Gaps = 24/397 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+I H DWH+G+ + + ++ + E + + D +++AGD++D PP +A Sbjct: 1 MKIFHMGDWHIGKLVNGFYMTEDQEFIIEKIYEAIKKEKPDVVVIAGDLYDRSVPPVHAV 60 Query: 61 TLYNRFVVNL-QQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L N+ + + + ++ LAGNHDS + + ++ +V + + D Sbjct: 61 ELLNKTMKKIVKDLNTKVIALAGNHDSNERVEFASSLLCDSGLYIVGNLKRKIDKIVLED 120 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 PIP+ + N D Q ++ Sbjct: 121 EYGKVNFYPIPYADVPVVRDLFEDENI---------KTHDLAMQKIISEILNDFNEDERN 171 Query: 180 IATGHLTTV--------GASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG 231 IA H +SD+ + + IG + +++F +Y ALGH+H Q + G Sbjct: 172 IAVAHGYVTQMKEDNFEALEESDSEKPLSIGGTEYINSKHFEKFNYTALGHLHGPQKV-G 230 Query: 232 MEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITA 291 + +RY GS + SF E + K + +V +E N+ + V G L I Sbjct: 231 SDKIRYSGSLMKYSFSEVNQKKGITIVDIDENGDVDIEIYNLKPRRDFRVKTGTLEEIIK 290 Query: 292 QLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLAS 351 + + S+ ++ + + L D K++++ ++ R SR V + Sbjct: 291 GFD---NSSENYEDYIKVILKDKGELLDPMAKLRSIYPNVMELTREERVSRNSSRNVATN 347 Query: 352 QQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFT 388 + + S++++ + F + E E + ++ + Sbjct: 348 IKEK--SKITLFKNFYEDIMDECCSEEEINVIEKIIE 382 >UniRef50_C5NXT6 Nuclease sbcCD subunit D n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXT6_9BACL Length = 379 Score = 273 bits (699), Expect = 5e-72, Method: Composition-based stats. Identities = 82/391 (20%), Positives = 154/391 (39%), Gaps = 20/391 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 ++ +HT+DWH+G+ K + Q L+ L+ + D +I+AGD++D P A Sbjct: 2 VKFIHTADWHIGRKLQGKDLLEDQQVVLENLITEMKKINPDFLIIAGDLYDRSVPSKEAT 61 Query: 61 TLYNRFVVNLQ-QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 TL +V + + + ++GNHDS L + + A L D Sbjct: 62 TLLQELLVKINIECNIPIFAISGNHDSRERLAIGEAWFSKHKFYLHTRLEQAFDKLSYED 121 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 A + +P+ P ++ I + Y D Sbjct: 122 ----ADIYLLPYFEPFEVREHFEDATLTTHNTATKRVIDEIY---------KNLDTNKTN 168 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCG 239 I H G ++D+ R+I +GT++ F DY+ALGH+H I E ++Y G Sbjct: 169 ILVAHTFVSGGLETDSEREISVGTVENVAVGVFDRFDYVALGHLHNPNAIKE-ERLKYSG 227 Query: 240 SPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDV 299 SP+ SF E ++K + L+ + E + + + + + G + + Q Sbjct: 228 SPMAYSFSEASQTKGMRLIEVTKESYSE-EFIQLKQKRKLHNISGSYEEVLTKEFQLNYD 286 Query: 300 SQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSE 359 + + +E++ E + D +I+ + +L +R+ V ++ T S Sbjct: 287 CKN--DYFSMELSDLEGITDPLPRIKEYYPNT--LILKQKRNTGIDNEVKLDREMLTKSP 342 Query: 360 LSVEEVFNRRLALEELDESQQQRLQHLFTTT 390 L + E F EL + Q++ L ++ Sbjct: 343 LQLIEGFYNEQTGSELTDGQKKILVNIIDKV 373 >UniRef50_UPI000178998B nuclease SbcCD, D subunit n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178998B Length = 394 Score = 273 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 100/388 (25%), Positives = 171/388 (44%), Gaps = 13/388 (3%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHT DWHLG+ +SR AE + FLD L++ A Q D I++AGDV+D+ +PP+ A Sbjct: 1 MRILHTGDWHLGRTLEGRSRLAEQERFLDELVKLADDQQADLILMAGDVYDSVNPPASAE 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 L+ L + G +VV+AGNHD + ++A T++ + + Sbjct: 61 QLFYEAAARLTEGGRPMVVIAGNHDQPERVASVTPLVAARGITLIGTPIADAVTVATART 120 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 A + +P+ + + ++ + L + Sbjct: 121 GETAKIAALPYPSEARLNELLS----VDGDEDQLRRAYSERVGKLMRMMAREFSPQTVNL 176 Query: 181 ATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFP-PADYIALGHIHRAQIIGGMEHVRYCG 239 A H+ +G +SD+ R I +G A Y ALGH+HR+Q + G +RY G Sbjct: 177 AMSHIYVLGGVESDSERPIQVGGAYTVDPSALAVGAAYTALGHLHRSQAVKGDGMIRYSG 236 Query: 240 SPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDV 299 SP+ SF E G++K V +V S G +E L + +P+ ++ ++ +W D Sbjct: 237 SPLAYSFSEAGQAKSVTMVDVSPGGSPVIEELFLSSGRPL--VRWKAKGGLDEVYRWLDE 294 Query: 300 SQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSE 359 ++P ++D+E++ E + IQ L +S ++ +R + E + +R L Sbjct: 295 GRDPEAFIDLEVSLTEAMG--LADIQRLRKSRDG-IVHIRPVYPEMEALELESERSRLPL 351 Query: 360 LSVEEVFNRRLALEELDESQQQRLQHLF 387 + F +R + L LF Sbjct: 352 PDLFRKFYQRQTG---GAEPEDHLVDLF 376 >UniRef50_A1SK69 Exodeoxyribonuclease I subunit D n=2 Tax=Actinomycetales RepID=A1SK69_NOCSJ Length = 386 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 99/386 (25%), Positives = 162/386 (41%), Gaps = 18/386 (4%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHTSDWHLG++F+ + A++D LLE + +VD ++VAGDV+D P A Sbjct: 1 MRILHTSDWHLGRSFHREGMLGHQAAYVDHLLEVVERERVDLVVVAGDVYDRALPHVDAV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 L + + L + +V+ +GNHDS L S ++ + AG + D Sbjct: 61 RLADETLARLAASRAKVVLTSGNHDSAQRLGFSSRLIDAAGVFIRTDAGGVGTPVLLEDE 120 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 + +P+L P + + AA+T+ ++ AD P + Sbjct: 121 HGPVAVYGLPYLDPDAVREPWGLPGRSHE-----AALTEAMRRVRADLASR----PARSV 171 Query: 181 ATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGS 240 H GA SD+ RDI +G + P F DY ALGH+H + + VRY GS Sbjct: 172 VLAHAFVAGAQPSDSERDISVGGVSLVPTSVFDGVDYTALGHLHGRHTL--TDTVRYSGS 229 Query: 241 PIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVS 300 P+ SF E + K LV + + PV +P+A L+G L + L ++ Sbjct: 230 PLAYSFSEATQVKGSWLVDLGADGVRECTFVEAPVPRPLARLRGTLDDLLHDL----TIT 285 Query: 301 QEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSEL 360 W+ +T D +++ P +++ R + + +RE S+ Sbjct: 286 VHEDAWVQATLTDDVRPLQAMERLRR---RFPHTLVIGFEPRGGAPTAVPAARREGRSDH 342 Query: 361 SVEEVFNRRLALEELDESQQQRLQHL 386 +V F + ++ L Sbjct: 343 AVALDFIADMRGAPATRAEAALLHEA 368 >UniRef50_Q3ICS5 Exonuclease sbcCD subunit D n=2 Tax=Alteromonadales RepID=Q3ICS5_PSEHT Length = 415 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 117/419 (27%), Positives = 198/419 (47%), Gaps = 25/419 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M++LHTSDWHLGQ FY R EH AF WLL T Q+D ++VAGD++ T +P + A Sbjct: 1 MKVLHTSDWHLGQQFYEYDRRHEHLAFFTWLLATLVEQQIDLLLVAGDIYHTATPSASAE 60 Query: 61 TLYNRFVVNLQQ--TGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAG---HAPQIL 115 +F+ + ++ H+V++AGNHDS + ++ ++A +T VV A ++ Sbjct: 61 NQLYQFIKDAKKQCPNLHVVIIAGNHDSANRILAAQPLLAQFDTHVVGRFEATAAADTVI 120 Query: 116 PRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQ 175 AV+ +PFLR D+ T +G Q + A + + + Sbjct: 121 TINTNKKRAVIVAMPFLRASDVTTLSQTKSGPSYAQGVKKAY-----ELALEHAATLQSE 175 Query: 176 PLPIIATGHLTTVGAS-KSDAVRDIYIGTLDAFPAQNF-PPADYIALGHIHRAQIIGGME 233 P+I GHL G SD+ R++ IG +A A F A Y+ALGH+H+AQ + E Sbjct: 176 NTPLIVMGHLHAKGGDISSDSERNLVIGGEEAISANVFGKQAHYVALGHLHKAQQVAKNE 235 Query: 234 HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKL----ESVENLNVPVTQPMAVLK----GD 285 +RY G+PIP+SF E S V++V F++ + +V L +P + VL Sbjct: 236 CIRYSGTPIPMSFSERNYSHQVNVVEFNSDEKQQISVTVNPLYIPRLADVIVLPKGECVP 295 Query: 286 LASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQR 345 LA + +++ + +L +++ + + + +I+ E + + R REQ Sbjct: 296 LAELCEEIKALDTTANTIAPYLRVKLKSSDTDTTFREQIEQALEGKHIRFCGIERVREQA 355 Query: 346 ERVLASQQRETLSE---LSVEEVFNRRLALEEL--DESQQQRLQHLFTTTLHTLAGEHE 399 E L+E L+ + + A ++ ES L++L ++ L + + Sbjct: 356 ANNEGGAVFEDLTEVEMLNPLNLLEQAFANDKDMHGESVPDALKNLLNDVINELEEQQQ 414 >UniRef50_C7MH54 Exodeoxyribonuclease I subunit D n=3 Tax=Micrococcineae RepID=C7MH54_BRAFD Length = 387 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 99/403 (24%), Positives = 156/403 (38%), Gaps = 20/403 (4%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLG+ + AFLDWL+E + +VD +++ GDV+D P + Sbjct: 1 MKILHTSDWHLGRTLHKVDLHEHQAAFLDWLVELVRAEEVDVVVIPGDVYDRAVPAVTSV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 TL + + L TG +V+ +GNHDS L R +M ++ + D Sbjct: 61 TLLDSALARLADTGATVVLTSGNHDSAERLGFGRSLM-RSGVHLLTDVPGIEHPVTVADE 119 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 + +P+L P T + A + A A + Sbjct: 120 HGEVLFFGLPYLEPDRARTELVAEGEAPLARSHEAVTRAALDRVRARAEHR---PGARTV 176 Query: 181 ATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGM--EHVRYC 238 H G SD+ RD+ +G +D+ PA DY+ALGH+H Q + Y Sbjct: 177 VLAHTFVTGGEGSDSERDLSVGGVDSVPAGVLGGIDYLALGHLHGCQDLSRAVGAPAWYS 236 Query: 239 GSPIPLSFDECGKSKYVHLVTFS-NGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWR 297 GSP+ SF E K V +V G V + PV + + L+G LA + AQ + Sbjct: 237 GSPLAFSFSERHHRKSVLMVELGAPGTEVEVRRIETPVPRRLTELRGTLAQLLAQRD--- 293 Query: 298 DVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETL 357 W+ +T +Q +++ P +L + R R Sbjct: 294 ---GHAGDWVKAVVTDPARPAHLQEQLREA---FPHLLLTEYAPEGREAREGTPVVRREQ 347 Query: 358 SELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHEA 400 + L V + F + ++ L + + E EA Sbjct: 348 NPLEVMDEFLAHVTGAAPTAAEHDVLDRAY----SAVRREREA 386 >UniRef50_B7AP64 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AP64_9BACE Length = 399 Score = 272 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 93/398 (23%), Positives = 171/398 (42%), Gaps = 20/398 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR H SD H+G+ + +S + + L ++E + + DA+I+AGDV+D P + A Sbjct: 7 MRFFHMSDLHIGKQLHERSLLDDQRHVLTRVVEYVREYSPDAVIIAGDVYDKSLPSAEAV 66 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASA----GHAPQILP 116 T+++ F+VNL TG +++++GNHDS LN I N V G + + Sbjct: 67 TVFDDFIVNLADTGTTVMLISGNHDSAERLNYGSRIFTKSNIHVAGMPPRNSGDHLKSVV 126 Query: 117 RRDGTPGAVLCPIPFLRPRDIITSQAGLNGI-EKQQHLLAAITDYYQQHYADACKLRGDQ 175 +D +PF++P + A N + + + Y +A + D Sbjct: 127 LKDEYGEVTFWLMPFIKPGYVKGVFADENAVGASTDAVGDCCSSYDSAVHAVIARENIDY 186 Query: 176 PLPIIATGHLTTVGASKSDAVRD---IYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGM 232 + H + D I +G +D DY ALGHIHR Q + G Sbjct: 187 SERNVIVSHQFYTNGQTQPSRTDSETISVGGIDNVDVSAVKDFDYAALGHIHRGQKV-GY 245 Query: 233 EHVRYCGSPIPLSFDECGKSKYVHLVTF-SNGKLESVENLNVPVTQPMAVLKGDLASITA 291 ++VRYCG+ + S E +K + +V GK + L + + ++KG I Sbjct: 246 DYVRYCGTMLKYSVSEREDNKALLMVDMKEKGKPAEITELKLDALHDVRLIKGKFDEIVR 305 Query: 292 QLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLAS 351 Q + ++ + +T + +++ ++ + + +L + V SR RE V Sbjct: 306 QY-----SDKNTNDYVSVVLTDENEVYNARQTLIDIFPNL--LSVSVDNSRTNREYVEEY 358 Query: 352 QQ-RETLSELSVEEVFNRRLALEELDESQQQRLQHLFT 388 +L EL F RR+ ++ + +++ ++ + Sbjct: 359 DDVNVSLDEL--FAEFFRRMQGRDMSDDERRAMEDVIN 394 >UniRef50_C3NXC1 Exonuclease SbcD n=22 Tax=Vibrio RepID=C3NXC1_VIBCJ Length = 379 Score = 272 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 93/395 (23%), Positives = 159/395 (40%), Gaps = 20/395 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ LHTSDWHLG+ F+ S + A L L++ + + VDA+IVAGD++D PP+ A Sbjct: 1 MKFLHTSDWHLGRQFHQVSLLDDQSAVLAQLIDFLRDNPVDAVIVAGDIYDRSIPPTAAI 60 Query: 61 TLYNRFVVNLQ-QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L + V + + L+++ GNHD L + M + A Q L Sbjct: 61 DLLDEVVSVICGELKTPLLMIPGNHDGAKRLGFAAKQMKNSGLHIFADFEQMMQPLVLHS 120 Query: 120 -GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLP 178 +P+ P + D Q ++ + + Sbjct: 121 PQAGEVAFWGMPYHDPELVRHYYHNDITTH----------DAAHQFLCESILAQRNPSQR 170 Query: 179 IIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYC 238 + H GA +S++ R + IG D ++F P DY+ALGH+H+ Q + G EH+RY Sbjct: 171 HVLISHCFVDGAMESESERPLSIGGSDRVDHRHFLPFDYVALGHLHQPQ-MKGAEHIRYS 229 Query: 239 GSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRD 298 GS + SF E ++K LV S ++ + M +++G+L +I A Sbjct: 230 GSLMKYSFGEQHQNKGATLVELGQQGFISATHIPLIAPHQMRIIEGELEAILAA----GA 285 Query: 299 VSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLS 358 + +L + + + D K++ + P + L + + R Sbjct: 286 TDPQADDYLLVRLLDKHAILDPMEKLRQV---YPNVLHLEKPGMLIGVDQEMGKARLARG 342 Query: 359 ELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHT 393 EL + F E L E Q++ + + Sbjct: 343 ELDMFRDFFLEAKREPLSEQQEKVVIEVIARLKAE 377 >UniRef50_A7HCA1 Nuclease SbcCD, D subunit n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HCA1_ANADF Length = 386 Score = 271 bits (693), Expect = 3e-71, Method: Composition-based stats. Identities = 102/400 (25%), Positives = 171/400 (42%), Gaps = 24/400 (6%) Query: 2 RILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYART 61 RILHTSDWHLG+ + +S + L+ L E + + DA+++AGDVFD PP+ A + Sbjct: 9 RILHTSDWHLGRALHEESLLEDQAWALERLREVLREARPDALLIAGDVFDRAVPPAEAVS 68 Query: 62 LYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDGT 121 L + F+ + G LV +AGNHDS L ++ + + + + + Sbjct: 69 LLDDFLNQVAALGVPLVAIAGNHDSAERLAFGARLVEARGVHLRGTHARSAEPVEIP--- 125 Query: 122 PGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPIIA 181 + P+P+L P + G G E + AA + ADA PLP + Sbjct: 126 GKGFIYPVPYLDPEVVR----GAEGDETLRGHAAATERVLVRVRADAAAR----PLPTVL 177 Query: 182 TGHLTTVGASKS-DAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGS 240 H GA++S D+ R + +G PA DY+ALGH+H Q + +RY GS Sbjct: 178 VAHAFVQGAAESPDSERPLAVGGSACVPAAALAGFDYVALGHLHAPQEV--APGMRYSGS 235 Query: 241 PIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVS 300 + SF E G K V L G +E + + + + L+G L + + RD++ Sbjct: 236 LLKYSFGEAGHEKGVVLAEVERGA-TRIERVPLGARRDVVRLEGTLDELLRR----RDLA 290 Query: 301 QEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSEL 360 +++ + + Y+ D + ++QA + VL + +L Sbjct: 291 PFERALVEVTLADEGYVFDAKNRLQARFAHVLN-VLRKDLEGGGDGTFASRVDGAGGDDL 349 Query: 361 SVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHEA 400 + E F +A ++ +F L +A + A Sbjct: 350 KLFEAFFETVAGATPGPEHRE----VFAGALAEIARKERA 385 >UniRef50_A4VHU4 Exonuclease SbcD n=22 Tax=Gammaproteobacteria RepID=A4VHU4_PSEU5 Length = 468 Score = 271 bits (693), Expect = 3e-71, Method: Composition-based stats. Identities = 124/415 (29%), Positives = 194/415 (46%), Gaps = 26/415 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR++HTSDWHLGQ +S+ R+ EH FL WLL+ H+ DA+++AGDVFDT +PP A+ Sbjct: 58 MRLIHTSDWHLGQTLHSQDRDHEHAQFLAWLLDQLVAHRADALLIAGDVFDTVNPPLKAQ 117 Query: 61 TLYNRFVVNLQQ--TGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAG--------- 109 F+V + +V++AGNHDS + +M LN V Sbjct: 118 EHLYDFIVRAHEKLPQLDIVMIAGNHDSGGRIELPAPLMKRLNAHAVGRISWVAEGQLDH 177 Query: 110 -HAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADA 168 L G A +PFLRP ++ G +A I +++ A A Sbjct: 178 QRLLVPLHDAAGNTAAWCLTLPFLRPAEVTGMALG-------DDYMAGIRQVHERLIAAA 230 Query: 169 CKLRGDQPLPIIATGHLTTVGASKS-DAVRDIYIGTLDAFPAQNFPP-ADYIALGHIHRA 226 +R ++A H G + S ++ R+I IG +A PA FP Y+ALGH+H+ Sbjct: 231 EAVRQ-PGQALVAMSHAHMAGGAVSEESERNIVIGNAEALPASLFPESVAYVALGHLHKP 289 Query: 227 QIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVL-KGD 285 Q + G +RY GSP+PLSF E V LV L+ V++L VP M + + Sbjct: 290 QQVAGQARIRYSGSPLPLSFAEVNYPHQVLLVELDGEALKQVDSLAVPRAVEMIRIGRAP 349 Query: 286 LASITAQLEQWRDVS--QEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSRE 343 LA + A LE E WL++ + DE L D++++I+ ++ + + Sbjct: 350 LAEVIAALEALPPTGLFDEHLPWLEVRVLLDEPLPDLRQRIETAITGKACRLVRIASEYD 409 Query: 344 QRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEH 398 + S+ L +++ +E+F R + + + +Q L F T L + H Sbjct: 410 GKRGETESEVLLGLDQITPQELFARAWEEQYGNPADEQALDD-FATLLQRVEFAH 463 >UniRef50_Q6GH61 Nuclease sbcCD subunit D n=52 Tax=Staphylococcus aureus RepID=SBCD_STAAR Length = 373 Score = 270 bits (691), Expect = 5e-71, Method: Composition-based stats. Identities = 81/392 (20%), Positives = 161/392 (41%), Gaps = 24/392 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+I+HT+DWHLG+ K + LD +E + + D I++AGD++DT P A Sbjct: 1 MKIIHTADWHLGKILNGKQLLEDQAYILDMFVEKMKEEEPDIIVIAGDLYDTTYPSKDAI 60 Query: 61 TLYNRFVVNLQ-QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L + + L + +++++GNHD LN + + Sbjct: 61 MLLEQAIGKLNLELRIPIIMISGNHDGKERLNYGASWFENNQLFIRTDFTSINSPIEIN- 119 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 G +P+ ++ QQ + I + D+ Sbjct: 120 ---GVNFYTLPYATVSEMKHYFEDDTIETHQQGITRCIETIAPEI---------DEGAIN 167 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCG 239 I HLT G SD+ R + IGT+++ F DY+ LGH+H I + ++Y G Sbjct: 168 ILISHLTVQGGKTSDSERPLTIGTVESVQKGVFDIFDYVMLGHLHHPFSI-EDDKIKYSG 226 Query: 240 SPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDV 299 S + SF E G++K VT ++G + V + + + + ++ G+ + + + Sbjct: 227 SLLQYSFSEAGQAKGYRRVTINDGIINDV-FIPLKPLRQLEIISGEYNDVINE----KVH 281 Query: 300 SQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSE 359 + +L ++ ++ D ++ + + + L + E A + E + Sbjct: 282 VKNKDNYLHFKLKNMSHITDPMMSLKQIYPNT---LALTNETFSYNEENNAIEISEK-DD 337 Query: 360 LSVEEVFNRRLALEELDESQQQRLQHLFTTTL 391 +S+ E+F + +EL + Q +++++ L Sbjct: 338 MSIIEMFYNHITDKELSDIQSNKIKNILENEL 369 >UniRef50_A3YYZ0 Putative exonuclease n=1 Tax=Synechococcus sp. WH 5701 RepID=A3YYZ0_9SYNE Length = 396 Score = 270 bits (690), Expect = 7e-71, Method: Composition-based stats. Identities = 87/393 (22%), Positives = 164/393 (41%), Gaps = 10/393 (2%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR+LHTSDWHLG++F+ S E L ++ A+ VDA+++AGD++D PP+ A Sbjct: 1 MRLLHTSDWHLGRSFHGASLLQEQAEVLARIVALARDGVVDAVLIAGDLYDRAIPPAEAV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVA--SAGHAPQILPRR 118 L+N + L+Q+G +V +AGNHDS ++ ++A T+ H P ++ R Sbjct: 61 LLFNDTLAQLRQSGAAVVAIAGNHDSHVRVSVYDPLLASFGVTIRGDVRRAHEPVLVSPR 120 Query: 119 DGTPGAVLCPIPFLRPR-DIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL--RGDQ 175 G + P+P+L P D L D + + + + Sbjct: 121 LGGAPVAIYPLPYLEPAVDGPGLAWALEQEAAVVPPTRLRHDEVTRLALERIRRDLQQRP 180 Query: 176 PLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHV 235 + H G S++ R++ +G +D + F DY+ALGH+H +Q + G + Sbjct: 181 HHRSVLVAHTFVAGGESSESERELTVGNVDRVSVEAFTGFDYVALGHLHGSQQLDG-PRL 239 Query: 236 RYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQ 295 Y G+P+P SF E +K V +V + +VE + + V + +A ++G + + + Sbjct: 240 AYSGTPLPYSFSEQHHTKSVRIVELNAAGQPTVEIVPLQVGRSLATIEGCIEQLCRDPQ- 298 Query: 296 WRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRE 355 + + +T + +++ + Q ++ Sbjct: 299 ---FEAAVEARVRVILTDEVLPLQAMARLRERFPHVAELRHRPPELLRSTASERHQQVQQ 355 Query: 356 TLSELSVEEVFNRRLALEELDESQQQRLQHLFT 388 S + F + ++ + L+ Sbjct: 356 AASPFELTSAFFADQQGRSANSAEAELLRQALE 388 >UniRef50_C7N5B0 Exonuclease SbcD n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N5B0_SLAHD Length = 381 Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 88/394 (22%), Positives = 162/394 (41%), Gaps = 22/394 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M++LH SD H+G+ + + + L +++T + VDA+++AGD++D SP + A Sbjct: 1 MKLLHVSDLHIGKRVHEFPMIEDQRHILAQIVDTIRERDVDALLIAGDIYDKSSPSAEAV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 L++ F+ + + +AGNHDS + + ++A N + A + D Sbjct: 61 ALFDDFLCAVADLNVPCLAVAGNHDSQERIAYASRLLASRNVYLSPVFDGAIDHVTLHDE 120 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 IP+LR +I + +G DY + + + Sbjct: 121 HGPVTFWLIPYLRFSEIKSCFDEFDG------------DYTDAMAKLIGQSGVNPEERNV 168 Query: 181 ATGHLTTVG----ASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVR 236 A H +SD+ IG +D A+ F DY+ALGHIHR Q I G + VR Sbjct: 169 ALAHQFVTWQSVQPERSDSEIG-NIGGVDNIDARAFDVFDYVALGHIHRPQRI-GRDTVR 226 Query: 237 YCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQW 296 Y GSP+ S E K + LVT E + + ++G LA +T+ Sbjct: 227 YSGSPLKYSISEAPWPKSMPLVTLGKKGSVDFELVPFKPLHDLREIRGPLADLTSP---D 283 Query: 297 RDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQ-QRE 355 + + +L + +T +E D +++ ++ +R + +++ + E Sbjct: 284 VVGAADAEDYLHVTLTDEEPWIDAMSRLREHYPNVMRLDYDNAATRSASQAAVSAPGELE 343 Query: 356 TLSELSVEEVFNRRLALEELDESQQQRLQHLFTT 389 ++S + F L ++Q + + T Sbjct: 344 SMSSEDLFAEFFEMRTGIPLTQAQTDLVHAVLTE 377 >UniRef50_C7PNA9 Nuclease SbcCD, D subunit n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PNA9_CHIPD Length = 414 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 123/423 (29%), Positives = 190/423 (44%), Gaps = 33/423 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHT+DWH+GQ FY R EHQ FL WL++T + H V+ +I++GDVFD +P + A Sbjct: 1 MKILHTADWHIGQTFYQYDRTYEHQQFLHWLVDTIKAHDVELLIISGDVFDIANPSAVAI 60 Query: 61 TLYNRFVVNL--QQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP------ 112 L+ F+ + Q G ++V AGNHDS A L + ++ + +V Sbjct: 61 KLFYAFLNSAVKAQPGLQIIVTAGNHDSAARLEAPKPLLESSDIHIVGLIERKEDGSINY 120 Query: 113 ----QILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADA 168 + R+G IPFLR D E + ++ Y++ Y A Sbjct: 121 EKMLIPVRDRNGETVLWCMAIPFLRMGDYPAV------AESETLYADGVSALYKEAYEHA 174 Query: 169 CKLRGDQPLPIIATGHLTTVGASKSD---AVRDIYIGTLDAFPAQNF-PPADYIALGHIH 224 + IA HL T+ A SD + R I G ++ PA+ F Y+ALGHIH Sbjct: 175 LTKKQGGQGI-IAMAHLHTLDAELSDHDKSERVIM-GGIEFVPAKAFHEELLYVALGHIH 232 Query: 225 RAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKG 284 +AQ IGG EH+RY GSP+P+SF E V SNG + +E L +PVT + + Sbjct: 233 KAQKIGGKEHIRYSGSPLPMSFSEMNYKHQVVSFDISNGVMSGLEMLEIPVTTELLRVPA 292 Query: 285 DLASITAQLEQWRDVSQ-----EPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVR 339 I A LE + + +L++ + + ++ KI+ V + + Sbjct: 293 KPQPIEAVLEALLQLPEATETIHTAPYLEVRVLLEGPEPALRHKIETALAGKHVRLAKID 352 Query: 340 ---RSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAG 396 S L ELS ++F +++ E+ + + L LF L + Sbjct: 353 VRYPSSAAEGTGERIASAAQLQELSPLDIF-KKIYQEDYERETPEELVALFQQVLQEINT 411 Query: 397 EHE 399 + E Sbjct: 412 KEE 414 >UniRef50_A6BHS2 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=A6BHS2_9FIRM Length = 391 Score = 265 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 73/401 (18%), Positives = 161/401 (40%), Gaps = 29/401 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ H SD H+G+ + + + + Q L ++ A+ + DAI++AGD++D P + A Sbjct: 5 MKFFHLSDLHIGKQLHRYNLKEDQQVILKEVITYAKELRPDAIVIAGDIYDKSVPSAEAV 64 Query: 61 TLYNRFVVNLQQ--TGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQI---- 114 +++ F+ +L + +++++GNHDS L + +I+ + + + P+ Sbjct: 65 NVFDEFLTDLSEITPEIPILIISGNHDSPDRLKYASEILKRHHIYLAGNVPERPEEHIEK 124 Query: 115 LPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGD 174 + D +PF++P + + I + Sbjct: 125 VTLHDAYGEVDFYLLPFMKPAYVKNIFVDGTPETYSDAVKEIIKR----------EKIDY 174 Query: 175 QPLPIIATGHLTTVGASKSDAVR----DIYIGTLDAFPAQNFPPADYIALGHIHRAQIIG 230 + + H VG +G +D + DY+ALGH+H AQ I Sbjct: 175 KDKRNVLVSHQFYVGEKAESPETCDSEVFSVGGIDNVDIGSVKEFDYVALGHLHGAQCI- 233 Query: 231 GMEHVRYCGSPIPLSFDECGKSKYVHLVTFS-NGKLESVENLNVPVTQPMAVLKGDLASI 289 G +RYCG+ + S E ++K + +VT G+ +EN + + + KG L I Sbjct: 234 GKPEIRYCGTLLKYSVSESTQNKSLTVVTLKAKGEKPEIENYPLHPLRDVRKKKGTLDEI 293 Query: 290 TAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVL 349 + + E ++ I +T + + + +++ + + + V R + + Sbjct: 294 IKEFRE-----TEKDDYISITLTDEIDPYKPKEQLERIF--SHILEIRVDNQRTRTKLKE 346 Query: 350 ASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTT 390 ++ + F + + E++ ++ ++ +F Sbjct: 347 MDEELVMKDPFTSFAEFYKEMQGREMNGEEETIMKEIFDKA 387 >UniRef50_D1PQD5 Exonuclease SbcD n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQD5_9FIRM Length = 376 Score = 265 bits (676), Expect = 3e-69, Method: Composition-based stats. Identities = 90/398 (22%), Positives = 156/398 (39%), Gaps = 27/398 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ LH +D HLG+ + + L+ +L H V+A+++AGD++D PP+ A Sbjct: 1 MKFLHLADLHLGKRVNGFDLLEDQRFILEQVLALCDEHDVEAVLLAGDIYDAPVPPASAC 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 TL + F+ L ++ +AGNHDS L+ + ++A + AP+ + D Sbjct: 61 TLLDWFLTQLAGRRIPVLAIAGNHDSAERLDFAAGLLAAQGVHLAGRFTGAPRQIVLNDR 120 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 +PF+R + + + Y A A + Sbjct: 121 HGPVEFTLLPFVRAATVRHFLPDADLPD------------YDSAVAAALGACQPAAPRRV 168 Query: 181 ATGHLTTVGA----SKSDAV-RDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHV 235 H V S + + +GT+D+ A F Y ALGHIHRAQ + G + V Sbjct: 169 LLAHQMVVAGVCPPQLSGSETAPLTVGTVDSIDASRFDGFAYAALGHIHRAQRV-GSDTV 227 Query: 236 RYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQ 295 RY G+P+ DECG K V LV +E ++ L + + M L G LA + Sbjct: 228 RYAGAPLCYHLDECGTEKSVTLVDLGRRGVEDIQLLPLIPRRAMRHLTGPLA-------K 280 Query: 296 WRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRE 355 + + ++ +T L D ++A + R S + + + Sbjct: 281 LTEHPTDTGDYIWATLTDPTPLPDAMAALRAAYPNAMRLDYQPRGSAAGPADAALAVRGK 340 Query: 356 TLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHT 393 +EL + F ++ L + + ++ L Sbjct: 341 PFAEL--FQDFFTQMNGRPLTIEEARAVKQLREEAAKA 376 >UniRef50_B0MBW6 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MBW6_9FIRM Length = 378 Score = 265 bits (676), Expect = 3e-69, Method: Composition-based stats. Identities = 92/392 (23%), Positives = 158/392 (40%), Gaps = 22/392 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M++LH +D HLG+ + + + L +L + VD +++AGD++D PP+ A Sbjct: 1 MKLLHMADLHLGKTVNGMNFIEDQRHVLAQVLGLMEKEPVDGLLLAGDIYDRSIPPAEAV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 TL + F+ + + + AGNHDS L + + N V + + D Sbjct: 61 TLLDWFLTGTAELMVPVFLAAGNHDSGERLEFGQKLFGQQNIYVEGTLREEFPAIRLEDE 120 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 L +P+ +P + + I + + ++ + D+ + Sbjct: 121 YGPVCLHLLPYFKPAEARALFP-EDEIRTHEDAMRSV----------LARHPVDRTERNV 169 Query: 181 ATGHLTTVGASK---SDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRY 237 H G SD+ + +G + F DY ALGHIH Q G E VRY Sbjct: 170 LVTHQFVTGTEPVTQSDSELLLSVGGTEQISYTVFEDYDYTALGHIHGPQK-AGRETVRY 228 Query: 238 CGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWR 297 GS + SF E K V LV V + M +KG L + L+ Sbjct: 229 SGSLLKYSFSEEFHKKSVTLVELKEKGSIIVTVYPLKPRHDMRRIKGKLEDL---LDPQV 285 Query: 298 DVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETL 357 + + ++ +T +E L D K++A ++ +E+ L +R R + V A + +T Sbjct: 286 VEAADCEDYISAVLTDEEELADPMEKLRASYPNI-MELNLEKRQRSGGDEVYADVREKT- 343 Query: 358 SELSVEEVFNRRLALEELDESQQQRLQHLFTT 389 L + E F L E +E + + L+ L Sbjct: 344 -PLELGESFLE-LTCGEAEEKRMEFLKKLLEE 373 >UniRef50_A5N4G1 Predicted exonuclease, sbcD related n=45 Tax=Clostridia RepID=A5N4G1_CLOK5 Length = 414 Score = 264 bits (675), Expect = 3e-69, Method: Composition-based stats. Identities = 101/416 (24%), Positives = 189/416 (45%), Gaps = 30/416 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHTSDWHLG++ SR E +AFL+ + Q + VD +I+AGD++D +PP+ A Sbjct: 1 MRILHTSDWHLGKSLEGHSRMEEQEAFLEDFINIVQKNHVDLVIIAGDIYDNANPPARAE 60 Query: 61 TLYNRFVVNLQQTGCHL-VVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ------ 113 ++ + + L G L +++AGNHD+ L + + ++ + Sbjct: 61 KIFYQTLKKLSSKGERLTLIIAGNHDNPDRLVAAGPLARDHGIIMMGTPKSIVPRGDYGN 120 Query: 114 ---------ILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQH 164 + A++ +P+ P + ++ N +E+++ + + D ++ Sbjct: 121 NKVINSGQGFIEIELNKEKAIIIAVPY--PSEKRLNEVLYNSMEEEKEQIKSYNDRIKKL 178 Query: 165 YADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFP-PADYIALGHI 223 + + K + I HL T+G+ ++ + R++ +G FP A YIALGHI Sbjct: 179 FHNLSKNYRE-DTINILISHLFTLGSDQAGSERNVQLGGSFIVNKDCFPENAQYIALGHI 237 Query: 224 HRAQIIGGM-EHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVL 282 H+ QI+ G RY GSPI + E K +V GK ++ + + V +P+ V Sbjct: 238 HKPQIVPGTNGKARYSGSPIQYNKKEINFKKKCFIVDVKAGKECNIHEIELKVYKPIEVW 297 Query: 283 KGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSR 342 K +SI +E+ +++ W+ +E+TTD ++ + + K T+ +E++ Sbjct: 298 K--CSSIEDAIERCTK-NKDRNCWVYLEVTTDRFIREDEIKFMKTTKKDIIEIV-----P 349 Query: 343 EQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEH 398 + + + S S EE+F R +E Q + L + + + Sbjct: 350 KIGDNPSKNINIHDFSHKSFEEIF-REFYFKERKVEPQSEVIDLLLSIMKEEKEDE 404 >UniRef50_C7TAC2 Exonuclease n=15 Tax=Lactobacillus RepID=C7TAC2_LACRG Length = 374 Score = 264 bits (675), Expect = 3e-69, Method: Composition-based stats. Identities = 80/382 (20%), Positives = 153/382 (40%), Gaps = 24/382 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR LHT+DWH+G+ + QA + L+ A+ QVDAI++AGD++D P A Sbjct: 1 MRFLHTADWHIGKKLNDFDLLEDQQAVFEQLVTVAKQQQVDAIVIAGDLYDRALPSEAAV 60 Query: 61 TLYNRFVVNL-QQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 + +V L ++ L+V++GNHDS L R + V A + D Sbjct: 61 ATLDHMLVTLNRKLNYPLLVISGNHDSAVRLRTGRSWFSTTKMYVNTQLAEAFTPVELGD 120 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 +P+ P + ++ AI + K + + Sbjct: 121 T----QFFLLPYFEPFAVRDYFQDA----TITNVAQAIRPIVAK-----MKAQFKPDMRH 167 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCG 239 I H G+ S + + +G LDA P + DY+ALGH+H + ++Y G Sbjct: 168 ILVSHFFAAGSDHSASETKVNVGGLDAVPIDDLAAFDYVALGHLHNHNALHAEPKIQYSG 227 Query: 240 SPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDV 299 + + + E + K V++V + + + + LK A +T Sbjct: 228 ALLKYAVAEAKQEKGVYIVDTD---TMARTFIPLTPQHDLIELKASYAELTDPDFYR--- 281 Query: 300 SQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSE 359 Q+ ++ +++T + + ++ +++ + ++ +RR Q++ L Sbjct: 282 QQDRDAYIGVDLTDTQVIPNVMAQLRKIYP----RIISLRRENGVTAVKPLKQRQRDLDP 337 Query: 360 LSVEEVFNRRLALEELDESQQQ 381 LS+ + F + +L Q + Sbjct: 338 LSLLKNFYAEMMQTDLTADQLK 359 >UniRef50_C8P3T7 Exonuclease n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P3T7_ERYRH Length = 379 Score = 264 bits (674), Expect = 4e-69, Method: Composition-based stats. Identities = 85/397 (21%), Positives = 169/397 (42%), Gaps = 24/397 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+I+H +D H+G+ S + + L+ ++E+ T + +++AGDV+D +P + A Sbjct: 1 MKIVHIADLHIGRRLNDLSLLEDQRYVLNQIIESLDTIKPHVLLIAGDVYDKANPSAEAF 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 ++N F+ L +++++GNHDS L R + + +V+ + ++ +D Sbjct: 61 EVWNDFLTQLSHRNIQVLIISGNHDSQERLGVGRALFEEHDIYLVSHYTGSIPVVTLQDD 120 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 IP+++P + G Q+ D L+ +Q + Sbjct: 121 LGPVHFHMIPYIKPSMVRNYHPEFTGTTFQEAFEFIFQD-----------LKINQEDRNV 169 Query: 181 ATGHLTTVGASK----SDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVR 236 A H +G SD+ +G LDA A F DY+ALGHIHR Q I G E +R Sbjct: 170 AIAHQFVIGNGTTPILSDSEIGPSVGGLDAIDASLFQKFDYVALGHIHRPQAI-GRETIR 228 Query: 237 YCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQW 296 Y GSP+ SF EC +K + ++ ++ + + + + +LKG L + ++ Sbjct: 229 YAGSPLKYSFSECMHTKQLPIIDLDRD--VAISFVELKPLRDVRILKGPLQHLYELGKED 286 Query: 297 RDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRET 356 R ++ +T D D K++++ ++L R+ + A++ + Sbjct: 287 RTE-----DYIHAILTDDIIQGDALHKLRSVYQNLVSLDFDNARTSSKSSLSRATEILDQ 341 Query: 357 LSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHT 393 + F L + ++ + ++ + Sbjct: 342 -KPFDLFNAFFTTLNGRDFNQEESDIVKAVIDEIQEE 377 >UniRef50_Q1DDQ4 Nuclease SbcCD, D subunit n=3 Tax=Myxococcales RepID=Q1DDQ4_MYXXD Length = 414 Score = 263 bits (673), Expect = 6e-69, Method: Composition-based stats. Identities = 136/419 (32%), Positives = 196/419 (46%), Gaps = 29/419 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR+LHTSDWHLG Y SR+AEH AFLDWLLET + VDA++VAGD+FDT +P + A+ Sbjct: 1 MRLLHTSDWHLGHTLYDVSRDAEHAAFLDWLLETLEAQSVDALLVAGDIFDTANPSAEAQ 60 Query: 61 TLYNRFVVNLQQ--TGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA------- 111 + +FV ++ +VV+ GNHDS A L+ + A L VV A Sbjct: 61 AAWYQFVAKARRRMPRLDVVVIGGNHDSAARLDAPDPLFAALGVHVVGGLPRARGAMDQE 120 Query: 112 --PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADAC 169 L G GA + +P+LRP D+ + L+ + Y + A A Sbjct: 121 RLLVPLHDAKGRVGAWVAAVPYLRPADLPPVPGDMG-----DRLVEGVRSVYAEVLAAAR 175 Query: 170 KLRGDQPLPIIATGHLTTVGASKSD-AVRDIYIGTLDAFPAQNFP-PADYIALGHIHRAQ 227 + R ++A GH G S + R I G A P FP Y ALGH+H+AQ Sbjct: 176 RRRQAGQA-LVAMGHCYMTGTELSALSERKILGGNQHALPVDLFPDDVAYAALGHLHKAQ 234 Query: 228 IIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLK---- 283 +GG E VRY GSP+PLS E G V LV L V++L VP T M + Sbjct: 235 RVGGREGVRYSGSPLPLSLSEAGYRHQVLLVELEGDALREVQSLPVPRTTDMVRVPSRDA 294 Query: 284 GDLASITAQLEQWR----DVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVR 339 L ++ QLE D + +L++ ++ +++K++ + E ++ + Sbjct: 295 APLDAVLTQLEGLPAHDADTLEWRRPYLEVCVSLPRPEPALRQKVEKVLEGKAARLVKLT 354 Query: 340 RSREQRERVLAS-QQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGE 397 + LA Q +L E + E+VF R A + +E L F T L + E Sbjct: 355 PAYTGTGGALAEVQPGLSLKERTPEDVFRARYA-RDFEEPPALALLEAFHTLLTDVQEE 412 >UniRef50_C6D8R4 Nuclease SbcCD, D subunit n=81 Tax=Bacillales RepID=C6D8R4_PAESJ Length = 389 Score = 263 bits (673), Expect = 7e-69, Method: Composition-based stats. Identities = 88/406 (21%), Positives = 157/406 (38%), Gaps = 27/406 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ HT+DWHLG+ + + L+ + + DA+I+AGD++D PP+ A Sbjct: 1 MKFFHTADWHLGKLVQGVYMTEDQRYVLEQFASAVELERPDAVIIAGDLYDRAIPPTEAV 60 Query: 61 TLYNRFVVNL-QQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L + + + ++ ++GNHDS ++ +M + + + +D Sbjct: 61 DLLDELLERIVVGLDTPVLAISGNHDSPDRIDFGTAMMESRGLHIAGRLRTEHKPVVLKD 120 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 + +P+ P + + N I + AIT H D Sbjct: 121 AFGEVHVHLVPYADPAQVRITYEDEN-IRTHDEAMRAITGRIASHM--------DPAARH 171 Query: 180 IATGHLTT--VGASK---SDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEH 234 I GH GA++ SD+ R + IG + A F P Y ALGH+H+A + G E Sbjct: 172 IVVGHAFVTATGAAEPNTSDSERPLSIGGAEHVRADYFAPFHYTALGHLHQAHFV-GSEK 230 Query: 235 VRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLE 294 +RY GSP+ S E +K +V G ++E + + M + G + I Sbjct: 231 IRYAGSPLKYSISEEHHNKGYLVVEMDAGGNVAIEKRELKPLRDMRRIAGPIEEIETHPV 290 Query: 295 QWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESL---PVEVLLVRRSREQRERVLAS 351 ++ + + D + K++A+ + V VR E + + Sbjct: 291 N--------EDYVFVTLLNDNPVLFPMEKVRAVYPNALHVERRVTAVRGIGEDGDAPETA 342 Query: 352 QQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGE 397 +R +S+ E F + LDE +++ F L Sbjct: 343 VRRSEADPVSLFESFYLEVKGVALDEPKKRLFADTFGGLLREEGDA 388 >UniRef50_C2EEA5 Exonuclease n=1 Tax=Lactobacillus ruminis ATCC 25644 RepID=C2EEA5_9LACO Length = 375 Score = 263 bits (672), Expect = 9e-69, Method: Composition-based stats. Identities = 85/391 (21%), Positives = 162/391 (41%), Gaps = 24/391 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ LHT+DWH+G+ + E L L + A +VDAI++AGD++D G P + Sbjct: 1 MKFLHTADWHVGRKLHGYDLSTEQADALRKLEKIAIDEKVDAIVIAGDIYDRGMPSEDSV 60 Query: 61 TLYNRFVVNLQ-QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 + N + L + G L+ ++GNHDS L+ + + + A + + Sbjct: 61 RMVNGALKKLNLEDGFPLLAISGNHDSAERLSTGSEWFEATSFYLHTKLERAAEPIEMS- 119 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 G +P+ + G ++ + I ++ + D K Sbjct: 120 ---GVQFFLMPYFEISAAK-NFLGDETLKTADQCVRRIVSLMKERFKDGFK--------H 167 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCG 239 + GH VG+ KSD+ +G L+A DY+ALGH+H+ + E V+Y G Sbjct: 168 VLVGHFFAVGSLKSDSETPSEVGGLEAVGIDELECFDYVALGHLHQHRA-SKSEKVKYSG 226 Query: 240 SPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDV 299 S + S E K V++V + + + + V+KG ++ E +R + Sbjct: 227 SLLKYSVSETSDQKGVYVVDTDSE---IIAYKPLEPLNDVRVVKGLFENLIKP-ENYRQI 282 Query: 300 SQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSE 359 + ++ +E+ + D+ +++ + P + L R + + E LSE Sbjct: 283 PDD--DYVAVELEDRVPIIDVMNRLK---KYYPRIIELKRVNGRVNHENNGVKNLEKLSE 337 Query: 360 LSVEEVFNRRLALEELDESQQQRLQHLFTTT 390 + + + F + E+ DE Q + ++ Sbjct: 338 MDLFKTFYKDTVGEDPDEEQCKMMEQALQDV 368 >UniRef50_Q03P49 DNA repair exonuclease n=46 Tax=Lactobacillales RepID=Q03P49_LACBA Length = 377 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 86/399 (21%), Positives = 160/399 (40%), Gaps = 25/399 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR LHT+DWH+G+ + S E + + + + A+ QVDA+++AGD++D P A Sbjct: 1 MRFLHTADWHIGKKLHGYSLLDEQRDAYEQIKKIAEKEQVDAVVIAGDLYDRALPSEAAV 60 Query: 61 TLYNRFVVNL-QQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 N +V+L +Q ++ ++GNHDS L ++ A N + A + + D Sbjct: 61 GTLNAMLVDLNRQQHFPVLAISGNHDSATRLGYGQEWFASTNFFMRTRLAAALKPVTLAD 120 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 +P+ P + I + + Q ++A Sbjct: 121 T----QFFLLPYFEPIQARQLFED-DQIRTVNQAMERLVKAMQANFA--------PDKKH 167 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCG 239 + H G SD+ + +G L+A P + P DY+ALGH+HR + + + ++Y G Sbjct: 168 VLVAHFFAAGGRHSDSETLVQVGGLNAVPTELLAPFDYVALGHLHRKEALQQVPTMKYSG 227 Query: 240 SPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDV 299 SP+ S E +K V L+ + + + VL A + R Sbjct: 228 SPLKFSTSEAEDTKGVWLIDTDTTPVTVTFK-PLKPLHDLIVLTDSFAHLMDP---ERHY 283 Query: 300 SQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSE 359 S ++ I +T + ++ ++++ P + L R + V + Q+ Sbjct: 284 SVTRDDFIAIALTDTTPITNVMQRLKT---RFPKIIELNRTKQLTVTPVDLNIQQVQRDP 340 Query: 360 LSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEH 398 L++ F ++ L +Q++ TL E Sbjct: 341 LALMTTFFEQMTQHPLTIAQEKW----ARETLQAAQKED 375 >UniRef50_B3CEC9 Putative uncharacterized protein n=4 Tax=Bacteroides RepID=B3CEC9_9BACE Length = 405 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 94/409 (22%), Positives = 178/409 (43%), Gaps = 30/409 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLG Y+ R E QAFL L + DA++V+GD++ +P + + Sbjct: 1 MKILHTSDWHLGHTLYNYDRSREQQAFLKQLTRIVAEEKPDAMVVSGDIYHYSTPSASTQ 60 Query: 61 TLYNRFVVNLQQ--TGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRR 118 +Y ++ + + G +VV AGNHDS + L + VV + + + Sbjct: 61 KMYTDGMLEIHRACPGMTIVVTAGNHDSSSKLEIDSSLWNHFGVKVVGNIERNQEEVNLE 120 Query: 119 D---------GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADAC 169 G + +P + P++ E+Q A+ D ++ A+ Sbjct: 121 KHIVEVKDERGILKGYIIAVPHVYPQNFPILDTETPREERQTRFFQALQDEVEKMNAE-- 178 Query: 170 KLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNF-PPADYIALGHIHRAQI 228 LP++ HL+ G+ ++ D +G ++ P DY+ALGHIH Q Sbjct: 179 ------KLPVVLMAHLSIEGSDQTG--HDETVGGIEYVPINAMGGGYDYLALGHIHCPQN 230 Query: 229 IGGMEHV-RYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLA 287 I G H RYCG+P+P+SFDE V +V K ++ + + P+ L + Sbjct: 231 IKGSRHCARYCGTPLPVSFDEA-YPHSVSIVEIQREKAPQIKTIEIENPMPLITLPKEAV 289 Query: 288 SITAQLEQWRDVSQEPPVWLDIEITTDEYL-HDIQRKIQALTESLPVEVLLVRRSREQ-- 344 ++Q + + P ++ + + +YL D + + + ++ +RE+ Sbjct: 290 DFEEAIKQLEEYPDDKPAYIRLNVLIKDYLAPDCNERASNAVKGKNCKFCYIKPNREKHT 349 Query: 345 ---RERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTT 390 + ++ Q+ + +S L + +++ + +E+DE + + + Sbjct: 350 SDDETKHISIQEMQEMSPLEIAKLYFQEAEGKEMDEELCELMNSVVQKV 398 >UniRef50_B1YES6 Nuclease SbcCD, D subunit n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YES6_EXIS2 Length = 373 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 87/398 (21%), Positives = 159/398 (39%), Gaps = 26/398 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ +HT+DWHLG+ + +S +A L L Q DA+I+AGD++D PP+ A Sbjct: 1 MKWIHTADWHLGKIVHGESMLDNQRAVLQEFLRLLDREQPDAVIIAGDLYDRAVPPTEAV 60 Query: 61 TLYNRFVVNLQ-QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L + + ++ + +V ++GNHDS L+ ++ + + + + Sbjct: 61 ELLDTVLADIVLERKIPVVAISGNHDSAERLSFGTTLLQRAGLHLAGKLTDTIEPVEIK- 119 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 G P+PF P + + I+ + + P Sbjct: 120 ---GVRFYPVPFADPATVRYIHQDETIRTHDDAMRKIIS-------------KMELEGPS 163 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCG 239 + GH +G ++D+ R + +GT A +F P Y ALGH+H I E +RY G Sbjct: 164 VLVGHAFVIGGLETDSERQLSVGTAGQVSASSFAPFTYTALGHLHNPLAI-KSETIRYSG 222 Query: 240 SPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDV 299 S + SF E K V ++T ++G + + + L G LA +TA Sbjct: 223 SLLKYSFSEASHVKGVDILTLNDGGTFDRRFEPLTAKRDLRELTGSLAELTAP---AFVA 279 Query: 300 SQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSE 359 +Q ++ I +T E L D K++ L P + L R + R+ + Sbjct: 280 TQATDDYIKINLTDAEALIDPMGKLKKL---YPNILHLERTGFTRESTRAVQASRDQVQA 336 Query: 360 LSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGE 397 ++ ++F ++ +Q + + + Sbjct: 337 ATLTDLFREFYEAVR-EKQPTDAMQTVLEEEAACVQND 373 >UniRef50_C5CAA0 Exodeoxyribonuclease I subunit D n=4 Tax=Micrococcaceae RepID=C5CAA0_MICLC Length = 407 Score = 262 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 115/409 (28%), Positives = 178/409 (43%), Gaps = 34/409 (8%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M +LHTSDWHLG++F+ + LD L+ T VDA+++AGDV+D PP+ A Sbjct: 1 MILLHTSDWHLGRSFHGTGLLEAQEEVLDALVATVTERGVDAVLLAGDVYDRALPPADAV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 L +R + L G +V+ +GNHDS L +++A V A A + + + Sbjct: 61 RLLDRTLTRLHAAGAQVVLTSGNHDSAVRLGFGGELLAAAGVHVRADAAELDRPVLLPEP 120 Query: 121 TPG------AVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGD 174 + IP+L PR + H A +T+ ++ +AD R + Sbjct: 121 GVDGGAGQTVAVYGIPYLEPRH------QGPAWGVEPHHTAVLTEAVRRVHADLAARRAE 174 Query: 175 QPLPI--IATGHLTTVGASKSDAVRDI--------------YIGTLDAFPAQNFPPADYI 218 P P+ + HL G S++ RDI +GTL P F DY Sbjct: 175 TPGPVAGVVLAHLFAAGGHGSESERDIGEGEHVEPDAPPEMLVGTLGQVPVSVFEGLDYA 234 Query: 219 ALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQP 278 ALGH+H Q + EHVRY GSP+P SF E G K LV + G + VE ++ + Sbjct: 235 ALGHLHGRQRL--AEHVRYSGSPLPYSFSEAGHRKGGWLVHVTGGAVTGVEAVDWDAGRR 292 Query: 279 MAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLV 338 +AVL G + + E + W+ + +T DE +++ S+ V Sbjct: 293 LAVLSGPIEDLLESPE----FAWAEQCWVQVTVTDDERPERALERLKTRFPSVLVFRHEP 348 Query: 339 RRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLF 387 R RER A R+ S+ ++ F + E++Q L+ Sbjct: 349 AGGRRARERTYAQVLRQAPSDHALAVGFVDHVRQRPASEAEQDLLRDAL 397 >UniRef50_C0VZX2 DsDNA exonuclease subunit n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VZX2_9ACTO Length = 389 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 90/404 (22%), Positives = 159/404 (39%), Gaps = 24/404 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHT+DWHLG+ + S E FLD+ ++ +A+++AGD+FD A Sbjct: 1 MKILHTADWHLGRVLHGYSLEDYQAQFLDFFIDLVTQEVPEAVLIAGDIFDRSIASIRAL 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 L ++ + L ++++ GNHDS + L + V + A + Sbjct: 61 ELMDQALQKLSAL-TQVILIPGNHDSASRLGYGTALY-HDQIKVFSKYSQAGTPVVLE-A 117 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 + PIP+L P + N A+ D Q ++P I Sbjct: 118 DTAVNIYPIPYLEPDLARFEFSDPNADIPVARSHQAVNDAAAQRI---FTDLAERPGIGI 174 Query: 181 ATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPP----ADYIALGHIHRAQIIGGME--H 234 H G+ S++ RDI +G + + A F Y+A GH+HR Q +G Sbjct: 175 VMAHPFVSGSVISESERDISVGGVQSIGADTFKDPSGKIRYVACGHLHRPQSLGATSDYV 234 Query: 235 VRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLE 294 VRY GSP+P SF E +K + + + G + + +P + + KG LA + Sbjct: 235 VRYSGSPLPFSFSEACDTKSITRLDIT-GSTVEISEIPIPQSYKLCSFKGTLAELEEA-- 291 Query: 295 QWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQR 354 + ++IT + +++ L ++ + Sbjct: 292 ----QLPTENCYYSVQITDPLRPEKLYARVKEKLPLLMN----LQYVETGQITESYRPTD 343 Query: 355 ETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTT-LHTLAGE 397 T+S + E F + ELD +++ +Q ++ L + E Sbjct: 344 ATISSPEITEHFFEQALGRELDATEKALVQEIWEQIRLEEVDNE 387 >UniRef50_A6KXN3 Putative exonuclease n=5 Tax=Bacteroides RepID=A6KXN3_BACV8 Length = 400 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 106/413 (25%), Positives = 187/413 (45%), Gaps = 38/413 (9%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHT+DWHLGQ FY R EH FL+WL + + H++D +++AGDVFD+ +P + ++ Sbjct: 1 MKILHTADWHLGQTFYEYDRREEHLHFLEWLKQQIRQHEIDVLLIAGDVFDSPNPSAESQ 60 Query: 61 TLYNRFVVNL--QQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPR- 117 +Y RF+ + + ++++AGNHDS A L ++ +N TV + Sbjct: 61 RMYYRFLREVTSENPSLQIIIIAGNHDSAARLEAPNPLLENMNVTVRGVVRRNAEGDIDL 120 Query: 118 --------RDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADAC 169 +G A +P+LR D +++ G++ Y Sbjct: 121 QHLIVPLYTEGEVTAYCLAVPYLRQGDYPSAENYSKGVQL--------------LYEQLF 166 Query: 170 KLRGDQPLPIIATGHLTTVGASKSDAVR--DIYIGTLDAFPAQNFPP-ADYIALGHIHRA 226 ++ LP+IA GHL G+ S+ R IG L+ F Y ALGH+HR+ Sbjct: 167 NEVKEKGLPVIAMGHLQATGSEISEDDRSERTVIGGLECVSPDAFDEAIAYTALGHLHRS 226 Query: 227 QIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDL 286 Q + E+VRY G+P+P+SF E + V ++T S +E L + + Sbjct: 227 QRVSHRENVRYSGTPMPMSFAERNNASGVVMITISAEG-TGIERLAFEPLAGVMSIPRQA 285 Query: 287 ASITAQLEQWRDVSQE----PPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSR 342 + L+ D+ +L+I+I E + KI+ + V + + Sbjct: 286 RPLEEVLQAIGDLPDGDVTLRSPYLEIKILMTEPEPSYKYKIEEALKGKAVRLARIAAML 345 Query: 343 EQRER----VLASQQRETLSELSVE-EVFNRRLALEELDESQQQRLQHLFTTT 390 Q++ + ++ +T+ L + +VF R+ E+ ++ +Q L+ + Sbjct: 346 PQKKASGIVATSYEELQTIRPLDMALDVFKRKYGGTEMPDTMKQLLESVIKEA 398 >UniRef50_A8U5M2 Exonuclease sbcD n=1 Tax=Carnobacterium sp. AT7 RepID=A8U5M2_9LACT Length = 376 Score = 261 bits (666), Expect = 4e-68, Method: Composition-based stats. Identities = 90/395 (22%), Positives = 166/395 (42%), Gaps = 30/395 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR+LHT+DWH+G+ S + FLD L+E +T +VDA+I+AGD++D P A Sbjct: 1 MRLLHTADWHIGKIVNELSMLEDQDYFLDQLIEKLKTVKVDAVIMAGDLYDRAMPSKEAV 60 Query: 61 TLYNRFVVNL-QQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L N+ + L Q+ ++V+AGNHDS + D++A + + + + + Sbjct: 61 ALANKVLTRLVQEVNVPVLVIAGNHDSNERVEYGADLLATNQLYIEGTVKEKTRKVTIK- 119 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 G +PF I + + + +A K D Sbjct: 120 ---GVNFYLMPFADYAYIRELLQDESIKSLEDA---------ARVQIEAIKKEMDPTEIN 167 Query: 180 IATGHLTTVG-----ASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEH 234 + H + + +D+ R + IGT + + F DY+ALGH+H+AQ + + Sbjct: 168 VLIAHGYVINLSNDTSETTDSERPLSIGTAEYVSVELFEAFDYVALGHLHKAQKV-KHDR 226 Query: 235 VRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLE 294 +RY GS + S E K + LVT +E + + + M V+KG +I Sbjct: 227 IRYSGSIMKYSKSEAVHKKQLSLVTLEKNH-VEIEPIYIQPKRDMRVIKGLFDNIME--- 282 Query: 295 QWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQR 354 Q+ ++ E+ + ++ D +++ + ++ RE+ + +Q Sbjct: 283 ------QKSEDYVFFELLDENFVMDAMNQLRRRYPNAMGLEYTAKKEREESSSAMHQEQL 336 Query: 355 ETLSELSVEEVFNRRLALEELDESQQQRLQHLFTT 389 + LS + F +EL +++ + L Sbjct: 337 KKLSIQDIFADFYAHYKEKELTTERKEIIDSLLHQ 371 >UniRef50_D1VPG1 Nuclease SbcCD, D subunit n=1 Tax=Frankia sp. EuI1c RepID=D1VPG1_9ACTO Length = 394 Score = 261 bits (666), Expect = 4e-68, Method: Composition-based stats. Identities = 99/404 (24%), Positives = 173/404 (42%), Gaps = 17/404 (4%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ LHTSDWH+G++ +SR + +A L ++ A+ ++VDA++VAGDV+D+ +P + A+ Sbjct: 1 MKFLHTSDWHIGKSLKGRSRLDDQEAVLREVVGIARDNEVDAVLVAGDVYDSAAPSAEAQ 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPR--- 117 L + ++ Q+TG ++V+AGNHD + R +M T+V + A + Sbjct: 61 RLAVQTLLGFQRTGAEVIVIAGNHDHPRSFEAYRPLMGAAGITMVGTPRRADKGGVIAFN 120 Query: 118 -RDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQP 176 R + +PFL R I + + Q AA D + A + Sbjct: 121 ARGTGEPVRVAVLPFLSQRFAIRAAELVTQTPAQN---AARYDQVVRDLLTALRSGFSDE 177 Query: 177 LPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFP-PADYIALGHIHRAQIIGGMEHV 235 + HLT G R PA FP A Y+ALGH+HR Q + V Sbjct: 178 AVNLVLAHLTVTGGQLGGGERLAQSIFDYYVPATAFPADAHYVALGHLHRRQTLPAPCPV 237 Query: 236 RYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQ 295 YCGSP+ + F E + V +VT S G S ++ V + + ++G +A + + Sbjct: 238 EYCGSPLAVDFGEQDNTPVVRVVTASPGTPASGVDIPVTTGRRLRTVRGTVAELADGAAE 297 Query: 296 WRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRE 355 + D +L + + ++ + L +L V + + R Sbjct: 298 YGD------AYLRVWVREPARAGLREQVQEVLPNALEVRIDPEFAAAAAAAAAGDRPSRP 351 Query: 356 TLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHE 399 + + E+F+ L + + + R++ LF + G Sbjct: 352 STGQRGPGELFHEYLGSQNVADD---RVERLFARLHDEIVGAER 392 >UniRef50_A7BEB8 Putative uncharacterized protein n=2 Tax=Actinomyces RepID=A7BEB8_9ACTO Length = 425 Score = 260 bits (665), Expect = 6e-68, Method: Composition-based stats. Identities = 110/409 (26%), Positives = 177/409 (43%), Gaps = 33/409 (8%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M ILHTSDWHLG+ + S AF++WL+ + VDA++++GDVFD PP A Sbjct: 25 MLILHTSDWHLGRTLHGASLGDSADAFIEWLVALVRERGVDAVLISGDVFDRAVPPVDAL 84 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 R + L + +++ +GNHD A L D++ + VV + Sbjct: 85 ARMRRALRELTEI-TTVILTSGNHDGAARLGLFADMLTP-SLHVVTDPEAIGTPV----E 138 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNG-------IEKQQHLLAAITDYYQQHYADACKLRG 173 GA++ P+P+L P + S + L + A + ++ AD R Sbjct: 139 AGGALVYPMPYLEPDLVRQSLSDLPARGEADLPTPLPRSHQAVLGAALRRVRADLEAWRD 198 Query: 174 DQP-LPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFP----------PADYIALGH 222 P IA H GA SD+ RDI +G + + A F DY+A GH Sbjct: 199 AGDERPAIAMPHAFVTGAQASDSERDIQVGGVSSVSADLFDTLGGEEPLTHGLDYVAAGH 258 Query: 223 IHRAQIIGGME-HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAV 281 +HR Q I G +RY GSPI SF E G +K + LVT + +E + +P + +AV Sbjct: 259 LHRPQDISGASVPIRYAGSPIAYSFSEAGATKSITLVTTDATSVTDIEVVPIPTLRGIAV 318 Query: 282 LKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRS 341 L+G + + A ++ S ++ I +T D +R + + E P +++V R Sbjct: 319 LEGTMDELLADPDEATTAS-----YVSITVTDDAR---PERMVPRIREVYPHALVVVHRP 370 Query: 342 REQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTT 390 + A R + V E F + L +++ ++ Sbjct: 371 SQAPALAPAMTVRASRDPREVTEEFYEAVGGRALSAQERELALDVWAQL 419 >UniRef50_B0NZF1 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0NZF1_9CLOT Length = 379 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 86/397 (21%), Positives = 167/397 (42%), Gaps = 25/397 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILH D HLG+ S + + LD ++ + ++D I++ GD++D P A Sbjct: 1 MKILHLGDLHLGKRVNEISMIEDQKFILDQIVTLVKEEKIDVILLCGDIYDKAIPTIEAI 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 L + F+ L +++++GNHDS L+ R++ N + + + + ++ Sbjct: 61 HLLDEFLEELSDLKVKVLMISGNHDSSERLSFGRNLFKRSNLYIASQFNQEIEKITIKED 120 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL-RGDQPLPI 179 +PF++P I H+L T+ Y++ + + + ++ Sbjct: 121 GYNINFYMLPFVKPAYI-------------NHVLKIQTETYEECFKHLMEQVKINEDETN 167 Query: 180 IATGHLTTV----GASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHV 235 I H SD+ +G +D + F DY+ALGHIH+ Q + G E V Sbjct: 168 ILLAHQFVTVGKNSPELSDSETS-SLGGIDNIDYRLFDAFDYVALGHIHKPQAM-GREMV 225 Query: 236 RYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQ 295 RY GS + SF E K K ++T S K S+ + + + M ++ L S+ + Sbjct: 226 RYAGSILKYSFSEIYKDKQATILTISKNKQISLSHHLLKPLRDMREMECSLESLLKR--- 282 Query: 296 WRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRS-REQRERVLASQQR 354 + ++ + +T +E + D K++ + ++ RR + + Q Sbjct: 283 -KCEIGNEEDYMHVILTDEEQILDAIGKVRTVYPNVMQISFKNRRHMMQYETIQMKENQI 341 Query: 355 ETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTL 391 + + + E F + +LDE + Q +F + Sbjct: 342 ADQNPMELFEQFYKMQNHIDLDEKRAQMAISIFEEVI 378 >UniRef50_D0L9F6 Nuclease SbcCD, D subunit n=5 Tax=Actinomycetales RepID=D0L9F6_GORB4 Length = 407 Score = 259 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 89/391 (22%), Positives = 147/391 (37%), Gaps = 18/391 (4%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRI+HTSDWHLG+ F+ + + L L Q DA++VAGDV+D P + A Sbjct: 1 MRIVHTSDWHLGRTFHGVELLDDQRRALAELAAIVGEEQADAVVVAGDVYDRSVPSADAV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 Y+ + + TG +VV +GNHDS L A + + G Q + Sbjct: 61 AAYDEGLAAIAATGAAIVVTSGNHDSATRLGSGSAFAAAGGLHLRTTIGAIDQPVMFDAD 120 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 + IP+L P T+ + + Sbjct: 121 DGPVAIYGIPYLEPDTARTTLGVGTA--------RGHAAVLSAAMDRIRADAARRSARTV 172 Query: 181 ATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGS 240 H VGA+ + + R I +G ++ PA F DY+ALGH+H Q + + VRY GS Sbjct: 173 VAAHAFVVGAAATGSERSISVGGVETVPAHIFSGVDYVALGHLHSPQQL--TDTVRYSGS 230 Query: 241 PIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVS 300 +P SF E K V +V + V + + ++ LKG L + E Sbjct: 231 LLPYSFGERSHRKSVWVVDLDADGVREVRARELRGVRGLSCLKGTLDELLTASEHAYAEQ 290 Query: 301 QEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSEL 360 +++ +T D R+++ E P V + + V + ++ Sbjct: 291 ----CYVEATLTDTVRPVDAMRRLR---ERFPYAVHVQWDRPRDGDGVDYRSRVHGRTDA 343 Query: 361 SVEEVFNRRLALEELDESQQQRLQHLFTTTL 391 + F + E + ++ + Sbjct: 344 EIVASFISDVRDEP-TPGECALVERALRQVV 373 >UniRef50_D2MLP9 Exonuclease SbcCD, D subunit n=1 Tax=Bulleidia extructa W1219 RepID=D2MLP9_9FIRM Length = 376 Score = 259 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 80/396 (20%), Positives = 159/396 (40%), Gaps = 23/396 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ H D HLG+ S + + LD +L ++H+VD +++AGD++D P S A Sbjct: 1 MKFAHIGDLHLGKILNGHSLLEDQRYILDQILHHLKSHRVDCLLIAGDIYDKTIPSSEAT 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 + N F+ L + ++++++GNHDS + L N + + P + D Sbjct: 61 EVLNHFLKCLNEQKINVILISGNHDSASRLAFGSSFFKQGNVFIQTHYSNQP--IVLEDE 118 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 + IP++ DI + G+E+ L +Q D K I Sbjct: 119 YGLIDVYAIPYMNRFDIKKAL----GLEETPSLKEGYHRLLEQLNLDLEK-------RNI 167 Query: 181 ATGHLTTVGASK--SDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG-MEHVRY 237 H +G S+ D+ ++ IG L+ + DY+ALGHIH+ + I +RY Sbjct: 168 LVAHQFVLGVSEPGEDSSEELLIGGLEEVSSPILEDFDYVALGHIHKPETILNLSGRIRY 227 Query: 238 CGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWR 297 GSP+ S E + K + + ++ +++ P+ ++K + + + Sbjct: 228 SGSPLAYSKAEANQLKSMPIFELKTKPDWELKLISLFPQHPVKMVKTTASDVLNGIRGL- 286 Query: 298 DVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETL 357 E +L +E+T + + +I + + + + L Sbjct: 287 ----EMMDYLYLELTDAYFPYAAISEIAKKYPNYLSIFPSHQNY--LFQENDEFDHLQKL 340 Query: 358 SELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHT 393 + + +++R++ L + Q +Q L+ Sbjct: 341 KPMEIINSWHQRVSGRNLSDEQLGWIQELWNKGEKE 376 >UniRef50_C8P7X3 Exonuclease SbcD n=1 Tax=Lactobacillus antri DSM 16041 RepID=C8P7X3_9LACO Length = 383 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 93/397 (23%), Positives = 160/397 (40%), Gaps = 27/397 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR LHT+DWH+G+ S + QA + AQ QVDAI+VAGD++D P A Sbjct: 12 MRFLHTADWHIGKTLNDFSLLEDQQAAFTQIERIAQQAQVDAIVVAGDLYDRSVPSEAAV 71 Query: 61 TLYNRFVVNLQ-QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 T N + L ++ ++GNHDS L+ D A + + + A + +D Sbjct: 72 TELNGMLRQLNLNDHFPVLAISGNHDSAVRLSTGTDWFARSSLYLNTTLAAAFTPVTIKD 131 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 +PF + + + + D ++ A+ K Sbjct: 132 T----QFFLLPFFGIQAVRNYF--------HDDHIKNVNDAMERIVAEMKKSFA-AGKHQ 178 Query: 180 IATGHLTTVGASKS-DAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYC 238 + H G+ ++ D+ I +G L A P DY+ALGH+H + + E V+Y Sbjct: 179 VLVAHFFAAGSQRTADSETLIEVGGLSAVSTAVLAPFDYVALGHLHNRKALNE-ERVKYS 237 Query: 239 GSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRD 298 GSP+ S E + K V LV +V+ + + + +LKG + + Sbjct: 238 GSPLKFSVSEAHQEKGVWLVDTEP---FAVQWVPLQPVHDITLLKGSFRELVTSAK---- 290 Query: 299 VSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLS 358 + + DIE+T E + D+ K++ + V L R + ++ + +QR S Sbjct: 291 -DKPATDFYDIELTDRERIPDVLNKLRTVYPK---IVSLHRTHQARQLALNRQKQRLAAS 346 Query: 359 ELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLA 395 L + F + +L Q++ + T Sbjct: 347 PLDLLSDFYSQTTGSKLSSEQRRWAEEALIKTTKEEQ 383 >UniRef50_C3RMV8 Exonuclease sbcD n=3 Tax=Bacteria RepID=C3RMV8_9MOLU Length = 377 Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 81/391 (20%), Positives = 154/391 (39%), Gaps = 26/391 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR +H SD HLG+ Y ++ L+ + + +++D +++AGD++D P + A Sbjct: 1 MRFVHISDIHLGKLLYQQNLLEIQADLLNQVCDYLVDNEIDVLVMAGDIYDRSVPSNEAI 60 Query: 61 TLYNRFVVN-LQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 + N F+ + + ++++AGNHDS + L+ ++ + A + + Sbjct: 61 DVLNDFLTKVILKYHKKVLMIAGNHDSASRLSFVSGLLRQEGLYIEAYPAKQMKPIEIE- 119 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 G +PF +P I I Y + D P Sbjct: 120 ---GVNFYLMPFFKPSYIRYLYED-----------EQIVTYQDAFRCYLEHQKIDFTKPN 165 Query: 180 IATGHLTTVGASK---SDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVR 236 + H G S+ S++ + +G + DY+ALGHIH Q I E +R Sbjct: 166 VLITHQFIAGNSEVMRSESEAVLSVGGTEIIDVSLVKQFDYVALGHIHAPQKIS-TETIR 224 Query: 237 YCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQW 296 Y GS + SFDE ++K + VT K S + +++ Q + + G I A Sbjct: 225 YSGSLMRYSFDEVNQTKSIVEVTID-NKKVSYQLVSLQPKQDLIKITGSFDEIMAD---- 279 Query: 297 RDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRET 356 + ++ +E+T + + ++ ++ S E A E Sbjct: 280 -SFAVNNNDFIAVELTDSMLVPNAIDYLRTKFSNVLQITYPKLISNETSNNTKADPGFEK 338 Query: 357 LSELSVEEVFNRRLALEELDESQQQRLQHLF 387 L +++ E F +++ EL +Q + + Sbjct: 339 LDSVALFEQFYQKIKGTELSAEAKQIVTEIM 369 >UniRef50_B5IJR3 Exonuclease n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IJR3_9CHRO Length = 402 Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 96/396 (24%), Positives = 168/396 (42%), Gaps = 19/396 (4%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 +R+LHTSDWHLG++F+ + +D L+E ++ VD +++AGD++D PP+ A Sbjct: 9 VRLLHTSDWHLGRSFHGHDLLSHQAEAMDRLVELSREAAVDLVVIAGDLYDRAIPPAEAV 68 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVAS--AGHAPQILPRR 118 L+ V L+Q G +V +AGNHDS ++ ++++ L+ T+ P ++ R Sbjct: 69 RLFTDTVARLRQGGAAVVAIAGNHDSHVRVSVYDELLSALDVTIRGRWQRADEPVLVTPR 128 Query: 119 DGTPGAVLCPIPFLRPR----DIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGD 174 G + P+P+L P ++ E Q+ +T + R Sbjct: 129 QGGQAVAVYPLPYLEPILDGPELQRLLEPEPEPEGQRLRHPEVTALAVERIRADLARRA- 187 Query: 175 QPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEH 234 + H G S S++ R++ +G +A P F DY+ALGH+H +Q + G Sbjct: 188 -GTRSVLVAHAFVAGGSSSESERELSVGNAEAVPVSTFAGFDYVALGHLHGSQQLDG-PR 245 Query: 235 VRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLE 294 + Y G+P+ SF E K V LV + VE + + V + + L G+L ++ A Sbjct: 246 LAYSGTPLAYSFSEQHHVKSVRLVELAEDGTPRVEVVPLGVGRALRSLSGELEALLAD-- 303 Query: 295 QWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQR 354 + W+ E+T +++ P V L R E + + R Sbjct: 304 --PGLEDSRGAWVRAELTDPLLPPQAMARLRQ---RFPHVVELRHRRAEGDAAGPSERSR 358 Query: 355 ETLSELSVEE---VFNRRLALEELDESQQQRLQHLF 387 + E+ F + + LQ Sbjct: 359 RIRNAQGPEQRMLAFFADQQGRPPRPEEARLLQQAL 394 >UniRef50_Q49XE0 Nuclease sbcCD subunit D n=12 Tax=Staphylococcus RepID=SBCD_STAS1 Length = 376 Score = 257 bits (657), Expect = 5e-67, Method: Composition-based stats. Identities = 85/396 (21%), Positives = 163/396 (41%), Gaps = 26/396 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+I+HT+DWHLG+ KS + LD +E + Q D I++AGD++DT P A Sbjct: 1 MKIIHTADWHLGRILNGKSLLEDQAYILDKFIEAMKLEQPDVIVIAGDLYDTSYPNKDAI 60 Query: 61 TLYNRFVVNLQ-QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L + + L + L+++ GNHDS LN + + + + Sbjct: 61 QLLEQTIDILNLEMSIPLIMINGNHDSKERLNYGSKWFEKSHMYIRTDLNDMNKPVTI-- 118 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 +PF ++ IE Q L + Y + D+ Sbjct: 119 --GNVDFYTMPFATINEM-QYFFDDKAIETHQQALNRVLAYMHEVI--------DENKVN 167 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCG 239 I GHLT G +S++ R + IGT+++ F D + LGH+H I + Y G Sbjct: 168 IFVGHLTVQGGIRSESERPLTIGTVESVDENLFNQFDRVMLGHLHHPFSI-ESNFINYSG 226 Query: 240 SPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLAS-ITAQLEQWRD 298 S + SF E + K +V N K+ + + + + + V++G+ I +LE Sbjct: 227 SLLQYSFSETKQPKGYKIVEIKNQKITD-KFIPLKPLRQLEVIEGNYEDAIQEKLE---- 281 Query: 299 VSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQ-QRETL 357 + +L ++ ++ D ++ + + + L ++ + + + + L Sbjct: 282 -VKHKENYLHFKLKHMSHVSDPMMHLKQIYPNT---LALTNQTFDFNTSIHHENIEIQKL 337 Query: 358 SELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHT 393 + ++ + F + E L +Q ++++ + T L Sbjct: 338 DDETIIDNFYNSITGEHLTTNQSKKIEKIMTALLEE 373 >UniRef50_Q2JDN8 Exodeoxyribonuclease I subunit D n=24 Tax=Actinomycetales RepID=Q2JDN8_FRASC Length = 418 Score = 257 bits (656), Expect = 5e-67, Method: Composition-based stats. Identities = 97/382 (25%), Positives = 157/382 (41%), Gaps = 14/382 (3%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR LHTSDWHLG+ Y AF+D L++ ++ VD +++AGDV D PP A Sbjct: 28 MRALHTSDWHLGRGLYGHDLMPAQAAFVDHLVDVVRSEGVDVVLIAGDVHDRAIPPVGAL 87 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 L++ + L+ G +VV++GNHD+ L + ++ + + D Sbjct: 88 ELFDEALSRLRDAGARVVVISGNHDAARRLGDKAGLLDPR-VRIRTDPAAVGDPVVVEDP 146 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAA---ITDYYQQHYADACKLRGDQPL 177 + IP+L P + + AA ++ +A L Sbjct: 147 AGAVRVYAIPYLEPSAANSQLPEPAQAPSGSDVPAAGIPAATMHRAMHAVRADLARYPDA 206 Query: 178 PIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRY 237 + H G + S++ RDI +G + PA+ F Y ALGH+HR Q I VRY Sbjct: 207 RSVVVAHAWVTGGAASESERDISVGGVGNVPARLFEGITYTALGHLHRPQAI--APSVRY 264 Query: 238 CGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWR 297 GSP+ SF E G +K LV L +V + VP + M +L+G LA + Sbjct: 265 SGSPLAYSFSESGDAKASLLVEIGPTGLGNVTRIGVPARRRMTLLRGSLADLLTDPAH-- 322 Query: 298 DVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLAS-QQRET 356 + ++ +T D ++Q P + L + + +L+ ++ Sbjct: 323 --APHEADFVSAVLTDPVRPMDAMARLQ---HRFPFALRLAHEPETEPDEILSFGRRTRG 377 Query: 357 LSELSVEEVFNRRLALEELDES 378 SEL + E F + Sbjct: 378 RSELEIAEAFVAHVRSAPSARE 399 >UniRef50_P23479 Nuclease sbcCD subunit D n=16 Tax=Bacillales RepID=SBCD_BACSU Length = 391 Score = 256 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 98/401 (24%), Positives = 174/401 (43%), Gaps = 15/401 (3%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHT+DWHLG+ +SR +E LD L + Q+DAI++AGD FDT +PP+ A Sbjct: 1 MRILHTADWHLGKTLEGRSRLSEQADVLDELNTIVKDEQIDAIVMAGDAFDTVNPPALAE 60 Query: 61 TLYNRFVVNLQQTGC-HLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L+ + L G +VV+AGNHD+ L+ + + ++ P + Sbjct: 61 QLFYESLSALSDRGKRPIVVIAGNHDNPDRLSAASPLTHENGIHLIGYPTTEPIHIEVPS 120 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 + + + + + + + +H + Sbjct: 121 AGELLAVGALAYPSEARLNEVLSDTFDEKLLRDHYDVKIRQAFEHMTSRFR----TDAVK 176 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFP-PADYIALGHIHRAQIIG-GMEHVRY 237 IA H+ G +++D+ R I +G A++ P A Y+ALGH+HR Q I RY Sbjct: 177 IAASHIYVAGGNQTDSERPIEVGGAYTVAAESLPADAAYVALGHLHRPQTIKRARTLARY 236 Query: 238 CGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWR 297 GSP+ SF E G +K V +V G+ + + + + +P+ +K A+ +++ W Sbjct: 237 SGSPLAYSFSEAGYAKSVTIVDAKPGEEATWQEVLLSSGKPL--VKWKAANGLSEVYSWL 294 Query: 298 DVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETL 357 D ++ W+D+EI + L +I L ++ P + + R E ++R + Sbjct: 295 DEGRDQNAWIDLEIRVADQLS--LEEIHRLRKAHPGFIHI----RPVFEEQNKDRERIEV 348 Query: 358 SELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEH 398 +S+E+ F + + + + LF + E Sbjct: 349 KHVSIEDRFKKFYEKQTGGAVPDEEMVKLFLELASGVEEED 389 >UniRef50_C0EE10 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EE10_9CLOT Length = 379 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 82/391 (20%), Positives = 149/391 (38%), Gaps = 23/391 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+++HTSDWH+G+ S + + FL L + DA+I+AGD++D P + A Sbjct: 1 MKVVHTSDWHIGRTLGGYSLLEDQEYFLKQLAAFLVKQRADALIIAGDLYDRAVPSAQAV 60 Query: 61 TLYNRFVVNLQ-QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L +RF+ ++ Q ++ +AGNHDS L+ S + + + + + Sbjct: 61 ALLDRFLSDVVLQKKIPVLAIAGNHDSPERLSFSNRFLEQGGLYLQGTVEQGVKRVDL-- 118 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 +P+L P + I + A+ ++ K Sbjct: 119 --GQVHFYLLPYLEPAAVRQLFPD-EAIHSFDQAVEAVARHFLYDELSGGKNILISHGFW 175 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCG 239 I S++ R +G DA F DY+ALGH+H Q + RY G Sbjct: 176 INQSDSHENSIQFSESER--SVGGSDAVDLSRFSMFDYVALGHLHAPQQASL--NARYSG 231 Query: 240 SPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDV 299 SP+ S E + K V L+ ++ V + + V++G LA + Sbjct: 232 SPLKYSVSEAKQKKSVTLLDIGENEI-KVSAHTFAPLRDVRVVEGALAEVVKSP------ 284 Query: 300 SQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSE 359 ++ + +T EY D ++ + P + L + ++ + S Sbjct: 285 ---SDDYVFVNLTDREYQLDAIGSLR---GAFPHILGLQYVRIQYNNVASGAEAVLSKSP 338 Query: 360 LSVEEVFNRRLALEELDESQQQRLQHLFTTT 390 L + E F + E + Q++ + L Sbjct: 339 LELFEEFYQSSTGEPMQPEQKKLIGQLLDEL 369 >UniRef50_UPI00019735BC nuclease SbcCD, D subunit n=1 Tax=Clostridium sp. M62/1 RepID=UPI00019735BC Length = 395 Score = 255 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 80/403 (19%), Positives = 158/403 (39%), Gaps = 20/403 (4%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ H SD H+G+ S +A L ++ A+ ++ DA+++ GD++D P A Sbjct: 1 MKFFHLSDLHIGKQLNGWSLRENQEAVLGQIVRYAEEYRPDAVLICGDIYDKSVPSGEAY 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASA----GHAPQILP 116 +++ F+ L G ++V+AGNHDS L+ + I+ + + G + + Sbjct: 61 SIFGGFLERLAGIGIPVLVIAGNHDSPERLSFAGQILEKERIFISSFPPSEKGERLRRVT 120 Query: 117 RRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQP 176 D PF+RP + A +G ++ + + D + + + D Sbjct: 121 LSDRWGEVDFYLFPFMRPGYVRRLLAAESGEQEDISVQSLTYDQAFRLMLE--REEIDSS 178 Query: 177 LPIIATGHLTTVGASK----SDAV-RDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG 231 + H V AS+ ++ + G LD DY ALGH+H +Q + G Sbjct: 179 RRNVILCHQFFVSASEKPDTCESETAVLMAGGLDQIDISALDCFDYAALGHLHGSQRV-G 237 Query: 232 MEHVRYCGSPIPLSFDECGKSKYVHLVTFS-NGKLESVENLNVPVTQPMAVLKGDLASIT 290 E RYCG+P S E K V +V G+ + L + Q + +G L + Sbjct: 238 RESARYCGTPYKYSVSEERHRKAVVMVELGRKGEEPLLSFLPLAGVQDVRKERGTLKQVL 297 Query: 291 AQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLA 350 + R ++ I +T + + + +++ + + + + R +R Sbjct: 298 S-----RAFEPSCHDFVSIVLTDEREPANFREQLREKYD--HILEIRIDNERTRRRLEDE 350 Query: 351 SQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHT 393 + L + F + +L E +++ + + Sbjct: 351 KEPIPVLKPMEAFRQFFSMILNSDLTEEEERLMAQVIEEAKEE 393 >UniRef50_C8WRD7 Nuclease SbcCD, D subunit n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WRD7_ALIAD Length = 425 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 100/417 (23%), Positives = 170/417 (40%), Gaps = 27/417 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHT+DWH G+ + R E F++ L VD +++AGDV+ T +P + A Sbjct: 1 MRILHTADWHFGKTLEGRDRAPEQWKFIEELAAICDAESVDLVLMAGDVYQTVNPSAEAE 60 Query: 61 TLYNRFVVNLQQTGCH-LVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 ++ + L G +V++AGNHD + R + L +V + R Sbjct: 61 EMFYHALHRLAAGGRRGVVIIAGNHDHADRIRAPRWLADPLGIVLVGLPKDEIRPTEARR 120 Query: 120 -------GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQH-------- 164 G GAV +P R I + + + L ++ + + Sbjct: 121 DGAWRPWGGVGAVELAVPSCPHRARIAAVPYPSESRLGEVLSESLEEREMRRSYSDRLAG 180 Query: 165 YADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPP-ADYIALGHI 223 + + H+ G ++D+ I +G A A FP A Y+ALGH+ Sbjct: 181 WFAVLARHFRPDTVNLLASHVYVAGGIETDSEIQIQVGGAYAVDASAFPATAQYVALGHL 240 Query: 224 HRAQIIGGME--HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAV 281 HR Q + G +RY GSPI SF E G+ K V LV G+ + + +P+ Sbjct: 241 HRPQEMEGPGGVPIRYAGSPIAYSFSEAGQQKSVTLVDVEPGQRARWWEIPLSCGRPLVR 300 Query: 282 LKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRS 341 + A++ W D ++ W+D+E+ D + R IQ L + P ++ +R Sbjct: 301 WRAS---SLAEVHAWLDEGRDADAWIDLEVRVDTEM--ALRDIQDLRGAAP-HIVHIRPV 354 Query: 342 REQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEH 398 +E + + + +S E +F R E++ L LF + + + Sbjct: 355 LPMQEAAESLDAQVS-RPISPEALFRRFFE-EKVGLPPDDALVRLFLGLVQDVETDE 409 >UniRef50_Q07GQ3 Exonuclease SbcD, putative n=1 Tax=Roseobacter denitrificans OCh 114 RepID=Q07GQ3_ROSDO Length = 381 Score = 254 bits (648), Expect = 4e-66, Method: Composition-based stats. Identities = 85/399 (21%), Positives = 163/399 (40%), Gaps = 22/399 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR+LHT+DWHLG+ S + LD + + V+ +++AGDV+D SP A Sbjct: 1 MRVLHTADWHLGKTLRGVSLHEDQAHVLDQVFKAVVEEGVEVLLIAGDVYDKASPSEAAM 60 Query: 61 TLYNRFVVNLQQ-TGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 LY+ F+ + + T +VV+AGNHDS L + + V L D Sbjct: 61 KLYSDFLERVHEQTDAAIVVIAGNHDSGQRLGTASKLFDRRRILVRGPIERDETPLILED 120 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 + +P+ + + + L A I +A + R Sbjct: 121 EHGKIAISALPYGEIYSARRAFEAEDIRSPEDVLRAQI---------EAARARVPDDARW 171 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCG 239 + H ++ R + +GT++ A F A+Y+ALGH+HR Q GG +RY G Sbjct: 172 VVVAHAFVTNCQPTETERRLSVGTVETVSAAIFEGANYVALGHLHRPQTAGGNA-IRYSG 230 Query: 240 SPIPLSFDECGKSKYVHLVTFSN-GKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRD 298 SP+ FDE G +K + + G++ +++ ++ + + ++G L + ++ + Sbjct: 231 SPLAFGFDEAGTTKSMTVFDLDGQGQVVNLKTVDFEPLRQVREVRGLLEDLVSEAKA--- 287 Query: 299 VSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLS 358 ++ + D L + +++ P + +R ++ A + + L Sbjct: 288 --NPSDDYIRAILLDDGALIEPAAQLR---PHYPNILQTLREKKQDLVMSSAGRAQSKLD 342 Query: 359 E-LSVEEVFNRRLALEELDESQQQRLQHLFTT-TLHTLA 395 + + V F + E E ++ ++ + L Sbjct: 343 DPVGVIGEFLTYVRGEGATEREEGVVKGVLDRPVLEDAK 381 >UniRef50_C6XKD2 Nuclease SbcCD, D subunit n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XKD2_HIRBI Length = 379 Score = 254 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 90/389 (23%), Positives = 162/389 (41%), Gaps = 18/389 (4%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLG+ F S +HQ FLD L + D +I+AGD+FD SPP+ A Sbjct: 1 MKILHTSDWHLGRTFKHASLIDDHQHFLDQLKIVLDQQKPDVLIIAGDIFDRASPPASAV 60 Query: 61 TLYNRFVVNLQ-QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 + + F ++ T L++LAGNHDS + + + + L D Sbjct: 61 SQFEDFQRHVYFNTQTALIILAGNHDSGERVGMNGAFADPKRVLIRGRLQRDEKPLILND 120 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 +P+ + L + + K Sbjct: 121 EFGEVAFSALPYGEIFSARECFEKADIATPADVLNQQV---------ECAKQFVPNGARW 171 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCG 239 + + H GAS ++ R + +G ++ A F A Y+ALGH+HR+Q + G EH+RY G Sbjct: 172 VISAHAFVTGASTTETERSLCVGGIETVSADTFNGAHYVALGHLHRSQKV-GAEHIRYSG 230 Query: 240 SPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDV 299 SP+ +FDE G K + L+T +E+++ + + + + ++G L+ + Q + Sbjct: 231 SPLSFAFDEVGNEKSMTLITLGQSGVENIDLIPIKPLRAVREIRGALSDLEKQTD----- 285 Query: 300 SQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSE 359 ++ +T L + +++ + ++ + A+ + + E Sbjct: 286 DPNNQDFIHAILTDKGGLVEPMARLRRVYPNVIALTRENKNEVSGNSTGRANAKLDNPQE 345 Query: 360 LSVEEVFNRRLALEELDESQQQRLQHLFT 388 V F + + +D +Q L + Sbjct: 346 --VISEFIQHVRETAIDPDEQSILDNAMN 372 >UniRef50_A8VW68 N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VW68_9BACI Length = 389 Score = 253 bits (646), Expect = 9e-66, Method: Composition-based stats. Identities = 85/401 (21%), Positives = 170/401 (42%), Gaps = 17/401 (4%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR+LHT+DWH G+ + R EH+AF+D L ++D +++AGD++D+ +PP+ + Sbjct: 1 MRVLHTADWHFGRTIEGRDRHDEHEAFIDELCGIVHEEEIDVVLIAGDIYDSVNPPAKSE 60 Query: 61 TLYNRFVVNLQQTGCH-LVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L+ + L G +V ++GNHD L+ + ++ + + P + + Sbjct: 61 RLFYDSLSRLSDFGKRTVVAISGNHDHPERLSAASAMLERHSVYIQGQPTLHPLTVDIKA 120 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 + +P+ + A E ++ + + + Sbjct: 121 ADQTLCVPWLPYPSESRLKEVLA----EEADDKVIRDAYNQKIRWMFGELTKNLSKDHVN 176 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFP-PADYIALGHIHRAQIIGGM-EHVRY 237 IA H+ G + SD+ R I +G + +FP DY ALGH+HR Q + RY Sbjct: 177 IAMSHVFAAGGNGSDSERPIEVGGSYTIASDSFPSNVDYTALGHLHRPQTLKHTIRPARY 236 Query: 238 CGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWR 297 GSP+ SF E G +K V ++ + G + + + + + L+ + + ++ W Sbjct: 237 AGSPLAFSFGERGVAKSVTVLDITPGHEPDIREIPISSGKQL--LRWEAVNGFDEVFHWM 294 Query: 298 DVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETL 357 + ++ W+D+++ ++ I + E P +L+++ + + Sbjct: 295 NERRDFGAWIDLKVHLEQAPSA--ETIAKIKEHYPG-ILIIQPVFPDMQSPETRRA---- 347 Query: 358 SELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEH 398 ELS+ E+F+ + RL+ LF + + Sbjct: 348 -ELSIRELFDMFYKKQMGGAEPDDRLRSLFIELVEEDPTDE 387 >UniRef50_C2M1T3 Nuclease SbcCD, D subunit n=3 Tax=Bacteroidetes RepID=C2M1T3_CAPGI Length = 409 Score = 253 bits (646), Expect = 9e-66, Method: Composition-based stats. Identities = 92/409 (22%), Positives = 166/409 (40%), Gaps = 23/409 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHT+DWHLG+ SR E +A ++ +++ A +VD +IVAGD+FD +P + A Sbjct: 3 MKILHTADWHLGKRLDRFSRIEEQRAVMEEIVQIANDQKVDMVIVAGDLFDNFTPNTDAV 62 Query: 61 TLYNRFVVNLQ-QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASA--------GHA 111 L+ + + L + +V ++GNHDS ++ + ++ Sbjct: 63 ELFYKTLKQLSCEGKRPIVAISGNHDSPKLIDAPDPLARECGIFLIGYPNAIVSPIKAET 122 Query: 112 PQILPRRDGTPGAVLCPIPF-LRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACK 170 +I +G P+ LR + E + +++ + Sbjct: 123 FEITTSEEGFLEFCFEKYPYPLRILHTPYANEPRLKQELEGDKQVSLSQLLSDKWHFLAN 182 Query: 171 LRGDQPLPIIATGHLTTVG-----ASKSDAVRDIYIGTLDAFPAQ-NFPPADYIALGHIH 224 D I T HL + + R I IG D P Y ALGH+H Sbjct: 183 TYCDSSGVNILTAHLFMQPKNGETLEEPEGERPIRIGNADMIYTDTIPPQIQYTALGHLH 242 Query: 225 RAQIIGGME-HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLK 283 + IG E V Y SP+ SF E G+ KYV +V + + S E + + +P+A + Sbjct: 243 GFKNIGSEENPVVYASSPLSYSFSEAGQQKYVVVVEVTPDQRPSFEKIPLTQGKPLA--R 300 Query: 284 GDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSRE 343 ++ LE R+ P W+++ + EYL Q + Q + + L+ + S E Sbjct: 301 KSFDNVPLALEWLRE---NPNTWVELTLELKEYLK-AQERKQLYSTHEGIVFLIPKISWE 356 Query: 344 QRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLH 392 + + ++ ++ +F + + + + LF ++ Sbjct: 357 LGKSPSGELSLQDINFENITPLFESYFKYKNSGIAPNKEILDLFNEVIN 405 >UniRef50_Q5P494 Exonuclease SbcD n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P494_AZOSE Length = 426 Score = 253 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 121/397 (30%), Positives = 177/397 (44%), Gaps = 27/397 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR+LHTSDWHLGQ+ + R EHQ FLDWLL T + D +++AGDVFD +P + A+ Sbjct: 1 MRLLHTSDWHLGQSLHDFDRTYEHQQFLDWLLALIATERPDVLLIAGDVFDNANPSAGAQ 60 Query: 61 TLYNRFVVNLQQTGCH--LVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP------ 112 RF+ ++ H +V++AGNHDS L + + + VV P Sbjct: 61 HQLYRFLTAARERMPHLSIVIIAGNHDSPGRLEATSPFLELFDAAVVGHVHRRPDQSIDV 120 Query: 113 ----QILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADA 168 L R+GT A IPFLRP D+ G + LA + + Y++ A A Sbjct: 121 ERLVVPLKNREGTVAAWCLAIPFLRPGDVPRV--DHEGEGEHDAYLAGVAELYRRALAVA 178 Query: 169 CKLRGDQPLPIIATGHLTTVGASKSD-AVRDIYIGTLDAFPAQNFP-PADYIALGHIHRA 226 R I+A GH S+ + R I +G +A PA F Y+ALGH+H A Sbjct: 179 QSRRQ-PGQAIVAMGHCHMAHGKLSELSERRIVVGGAEALPAGIFDAAIAYVALGHLHLA 237 Query: 227 QIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDL 286 Q +GG +H+RY GSP+P+SF E V V + + + VP + + + Sbjct: 238 QAVGGRDHIRYSGSPLPMSFAELDYPHQVMCVELDGEAVAEIRPVRVPRSVELIRVPKTH 297 Query: 287 ASITAQLEQWR--------DVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLV 338 ASI L D +L++ + D ++ +I+A PV + + Sbjct: 298 ASIDEVLPLLEALDPGVAADGPAHAHPYLEVRVRLDAPEPGLRVRIEAALAGKPVRLARI 357 Query: 339 RRSREQRERVLASQQRE--TLSELSVEEVFNRRLALE 373 + R AS L L+ E VF R Sbjct: 358 DPASSPRGDAPASSAMSLGDLERLAPETVFARLCEQR 394 >UniRef50_A7V415 Putative uncharacterized protein n=2 Tax=Bacteroides RepID=A7V415_BACUN Length = 403 Score = 252 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 103/408 (25%), Positives = 174/408 (42%), Gaps = 29/408 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLG Y+ R E QAFL L Q DA++V+GD++ SP + + Sbjct: 1 MKILHTSDWHLGHTLYNYDRTVEQQAFLRQLTRIVTEEQPDAMVVSGDIYHYSSPAAATQ 60 Query: 61 TLYNRFVVNLQQ--TGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPR- 117 +Y ++N+ Q +VV AGNHDS + L ++ VV + + + Sbjct: 61 KMYTDAMLNIHQACPEMTIVVTAGNHDSSSKLEIDSNLWQHFGLNVVGNIERTAEEVNLD 120 Query: 118 -------RDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACK 170 + + +P + P++ ++Q A+ D K Sbjct: 121 KHIIEINNEKKTKGYVIAVPHVYPQNFPLLDTETPRDQRQARFFQALLDEV--------K 172 Query: 171 LRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNF-PPADYIALGHIHRAQII 229 R LP++ HL+ G+ +S D IG ++ P DY+ALGHIH + I Sbjct: 173 KRNTAQLPVVLMAHLSIEGSDRSG--HDESIGGIEYVPLSAMGEGYDYLALGHIHCPRDI 230 Query: 230 GGMEHV-RYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLAS 288 G H RYCG+P+P+SFDE V ++ G + + P+ L D Sbjct: 231 KGSHHHARYCGTPLPVSFDET-YPHSVSIIELEKGAEPQISTREIENPIPLVTLPHDPTP 289 Query: 289 ITAQLEQWRDVSQEPPVWLDIEITTDEYL-HDIQRKIQALTESLPVEVLLVRRSREQ--- 344 L+ + +E P +L + + T YL D K + + ++ +RE+ Sbjct: 290 FEDALKLLEEYPEEKPAYLRLNVLTKGYLPPDCNEKASNAAKGKACKYCYIKTTRERQAD 349 Query: 345 --RERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTT 390 + ++ Q+ + +S L + ++ R EE+D Q ++ + Sbjct: 350 TDESKPISIQEMQEMSPLEIARLYYRETEGEEMDPELCQLMETVMQKV 397 >UniRef50_C6VPS0 Exonuclease SbcD n=5 Tax=Lactobacillales RepID=C6VPS0_LACPJ Length = 393 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 86/404 (21%), Positives = 158/404 (39%), Gaps = 23/404 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M++LHT+DWH+G+ S E +A +L A +VD I++AGD++D P + A Sbjct: 1 MKLLHTADWHIGRTLNGYSLLDEQEAAFKQILTIALAEKVDGIVIAGDIYDRAVPSTDAV 60 Query: 61 TLYNRFVVNLQ-QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 T + + + + + +AGNHD LN R+ +A+ N + A + Sbjct: 61 TSLDHMLQAINIEHHLPIYAIAGNHDGAKRLNYGREWLAYNNFHINTLLAEAFTPI---- 116 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 TP A + +PF P D EKQ + I D Q+ +D D Sbjct: 117 ETPTAQIFMLPFFDPIDARVYYQQQGLPEKQVKAIHTIHDAMQRVVSDLVATF-DPEKRH 175 Query: 180 IATGHLTTVGASKSD----AVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHV 235 + H T + D + +G L F DY+ LGHIH + + Sbjct: 176 LLITHFTVTPKADDDLELTSETTSKVGGLATLTTDLFADFDYVMLGHIHTRLASPDKDRI 235 Query: 236 RYCGSPIPLSFDECG---KSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQ 292 RY GSP+ + E K V +VT + + E + + L+ ++ Sbjct: 236 RYAGSPVKFNVKEANPKFHGKGVEIVTITP-TAITHEFKPIQPQTDLVTLRAPWETLLDP 294 Query: 293 LEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQ 352 + ++ + ++ +++ +++ + + +V E + A Sbjct: 295 NFYQQQPLKQAWFAITVQEFDRSKHLNVRAQLEQIYGT------IVELDYESNHQATAIS 348 Query: 353 QRETLSELSVEEV---FNRRLALEELDESQQQRLQHLFTTTLHT 393 + ++ELS + + F + +L +QQQ + +F Sbjct: 349 GPKNMNELSPDAIVGQFFHAITGNQLSTTQQQLVDQIFVNLRKE 392 >UniRef50_Q5LYZ3 ATP-dependent dsDNA exonuclease n=8 Tax=Bacteria RepID=Q5LYZ3_STRT1 Length = 408 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 86/408 (21%), Positives = 162/408 (39%), Gaps = 29/408 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ LHTSDWH+G+ S E + +++ A + +VD +I++GD++D PP A Sbjct: 7 MKFLHTSDWHVGRTLNGWSLLEEQEWAFQQIVDLAISEKVDGVIISGDLYDRAVPPVDAI 66 Query: 61 TLYNRFVVNLQ-QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L+N+ + L + + ++GNHD L+ RD + A + + + Sbjct: 67 KLFNKTLARLVLEEQIPVYAISGNHDGAERLHFGRDFFQHQGLHLSTRLEEAFEPIELEN 126 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 + +PF+ P D G E + I D D K D Sbjct: 127 ----CQIFLLPFIDPIDARIYYKDDEGKE-----IQGIGDALTYILEDMEK-AFDPDKAH 176 Query: 180 IATGHLTTVGASKSD---------AVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIG 230 + H SD + +G L + F DY+ALGHIH Sbjct: 177 VLVTHFAVSKKDDSDGQGLRELMLSETSNTVGGLTNVTSDLFKSFDYVALGHIHTRFA-S 235 Query: 231 GMEHVRYCGSPIPLSFDECGKS--KYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLAS 288 + V+Y GSP+ + E + K V+++ S + V +P+ L+ + Sbjct: 236 PTKRVQYSGSPVAFNVKEAKRKEEKGVYILELDASGDMSQTFHTLEVKRPIVALQESFET 295 Query: 289 ITAQLEQWRDVSQEPPVWLDIEITTDEYLH--DIQRKIQALTESLPVEVLLVRRSREQRE 346 + + Q+ DI++++ + L +++ +++ + + VE+ R + E Sbjct: 296 LMSPEFYKNQPCQKAWFAFDIQLSSRKELEGINVRARLEEIYGTDIVEITFSRLGDVREE 355 Query: 347 RVLASQQRETLSELSVEEV---FNRRLALEE-LDESQQQRLQHLFTTT 390 + Q + L S +E+ F + + + L E Q ++ +F Sbjct: 356 NLTVDQHLKDLEMQSPQEIVFDFYQTVTGGDVLSERQTALVESVFEEI 403 >UniRef50_C8PR34 Exodeoxyribonuclease I subunit D n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PR34_9SPIO Length = 399 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 95/407 (23%), Positives = 166/407 (40%), Gaps = 30/407 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M++LHT+D HLG+ + + L+ + + A+I+AGDV+D P + A Sbjct: 1 MKLLHTADLHLGKTLHETPLLGVQEKMLNDIHDILTRDDYAALIIAGDVYDRAIPSAEAV 60 Query: 61 TLYNRFVVNLQQ--TGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRR 118 +L+++F+ +++ + ++ GNHDS L +R+I+ + G + Sbjct: 61 SLFSKFLARIREDCPDTAVFIIPGNHDSAQRLAFAREILQNQRIYIAQDTGKLADPVILT 120 Query: 119 DGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDY-YQQHYADACKLRGDQPL 177 +GT + +PFL + K+ + A + + K + Sbjct: 121 EGTEKLAVYLLPFLN-------FGAFSEETKETYRTAGDSQAEMAAVASHILKQAVKPDI 173 Query: 178 PIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRY 237 P + HL TVG S + R IGT + F DY+ALGH+HR Q I + + Y Sbjct: 174 PALLAAHLFTVGGQSSASERTF-IGTAEYVNPDLFSFFDYVALGHLHRCQRI--TDRMYY 230 Query: 238 CGSPIPLSFDECGKSKYVHLVTFS----------NGKLESVENLNVPVTQPMAVLKGDLA 287 GSP+P SFDE +K V + ++E + + +P+ L+G A Sbjct: 231 SGSPLPYSFDESDDAKCVLSIDIDCTPKQPDINGAKAPVTIERIPIISERPLKRLEGSFA 290 Query: 288 SITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTE-SLPVEVLLVRRSREQRE 346 E D + +L+I + E + + ++ L + EQ E Sbjct: 291 DFFT--EHLYD--EWSGCYLEITLNDAEVIAHPMQLLRQKFPFLLSIRQKSFMNQEEQEE 346 Query: 347 RVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHT 393 L ++R L++ E FNR ++ Q + Q LF Sbjct: 347 EQLTLRERTAEDPLTLAENFNRF--ESLINGEQNRMKQELFEQLCKE 391 >UniRef50_D1ADM3 Nuclease SbcCD, D subunit n=2 Tax=Actinomycetales RepID=D1ADM3_THECD Length = 390 Score = 251 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 111/399 (27%), Positives = 166/399 (41%), Gaps = 22/399 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHT+DWH+G+ ++R EH+A L L+E A+ VDA+IVAGDVFDT +P ++ Sbjct: 1 MKILHTADWHVGKVLRGRARADEHRAVLKELVELARAEDVDAVIVAGDVFDTSAPTPPSQ 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPR--- 117 L + ++ L++ G +VVLAGNHD L+ R ++ L VV Sbjct: 61 ALVMQTLLALREGGRQVVVLAGNHDDPRLLDVWRPVLGALGVHVVGRFRRPDDGGVLSWT 120 Query: 118 RDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPL 177 L +PFL R ++ + L Q + A A Sbjct: 121 TRAGEDVRLAVMPFLSHRFVVRAVEALTDTPDQHNRS---YAARFAQLAAALTAGFGGDT 177 Query: 178 PIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPP-ADYIALGHIHRAQIIGGMEHVR 236 + H T G R+ F A FPP Y ALGH+HR Q + G + Sbjct: 178 VNLVAAHGTLPGGKLGGGEREAQTIFSYYFEATAFPPTVQYAALGHLHRRQQMPGPCPIW 237 Query: 237 YCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQW 296 Y G+PI + F E S LVT G+ V + + + + + G L + AQ E Sbjct: 238 YSGAPIAVDFGEEHNSPGALLVTVEPGRPAQVREVTLASPRSLRTVNGSLEELEAQAESL 297 Query: 297 RDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEV-LLVRRSREQRERVLASQQRE 355 +D WL + + R Q L +L V+V R + +RE A++ Sbjct: 298 QD------AWLRVVVAEKPRAGLADRVRQILPNALTVDVDERFRPTAARREGGGAARAAR 351 Query: 356 TLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTL 394 + E+F LA D+ R+ LF + Sbjct: 352 -----TPRELFRDYLAQTGRDD---PRVIALFDRLHDEV 382 >UniRef50_A5ZTK8 Putative uncharacterized protein n=3 Tax=Firmicutes RepID=A5ZTK8_9FIRM Length = 405 Score = 250 bits (639), Expect = 5e-65, Method: Composition-based stats. Identities = 84/405 (20%), Positives = 166/405 (40%), Gaps = 42/405 (10%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ H SD H+G ++ + + LD + E A+ + DA+++AGD++D P + A Sbjct: 24 MKFFHLSDLHIGLKLMNRDLREDQEYILDEITELARRKRPDAVVIAGDIYDKAVPSAEAV 83 Query: 61 TLYNRFVVNLQQ--TGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP----QI 114 +++ F+V L + +++++GNHDS +N R +++ N +V + Sbjct: 84 EVFDHFLVGLTEAVPDAVIMMISGNHDSAPRVNCFRKVLSGQNIYMVGQPPRTESEYIEK 143 Query: 115 LPRRDGTPGAVLCPIPFLRP---RDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 + D +PF++P + ++ N + + L I + Sbjct: 144 VTLNDAYGEVNFYLLPFVKPSMVKQVVGVDENGNNLSYNETLHRLIG-----------RE 192 Query: 172 RGDQPLPIIATGHLTT--VGASKSDAVRDIY----IGTLDAFPAQNFPPADYIALGHIHR 225 + + + H G + D R +G +D A DY+ALGHIH+ Sbjct: 193 KINSDERNVLVSHQFYLPSGKNAEDVERMDSEMRTVGNIDEVSADVLEKFDYVALGHIHK 252 Query: 226 AQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGD 285 + G E RYCG+P+ S E + K + +V L + + + V+KG Sbjct: 253 PMKV-GSELYRYCGTPLACSVSEAQQQKGIIMVEMGVKGEIKTTILPLEPLRQVKVVKGT 311 Query: 286 LASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQR 345 L + + ++ + +T D+ D+ + + + P + + R ++ + Sbjct: 312 LEEVLK---------ESCKDYVTVILT-DKVDLDVIDMQERIRLAFPNLLEIRRENQRKT 361 Query: 346 ERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTT 390 + Q E L + F L++LDE ++ LQ + T Sbjct: 362 DYTRTLQTEELLDPYELCCSF-----LKDLDEEEKMILQDVLHTV 401 >UniRef50_UPI0001AF0806 nuclease SbcCD, D subunit n=1 Tax=Streptomyces ghanaensis ATCC 14672 RepID=UPI0001AF0806 Length = 390 Score = 250 bits (637), Expect = 8e-65, Method: Composition-based stats. Identities = 89/389 (22%), Positives = 161/389 (41%), Gaps = 18/389 (4%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ LHTSDWH+G+ +R E + L ++ A+ H+VDA++VAGD++++ +P + A+ Sbjct: 1 MKFLHTSDWHVGKVLKGHNRLDEQRTVLREIVRVARDHRVDAVLVAGDLYESSAPSAQAQ 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA----PQILP 116 L + ++ L++TG ++ +AGNHD AT + R +MA T+ +A A Sbjct: 61 QLLVQTLLALRRTGAEVIAIAGNHDHAATFDAYRPLMASAGITLAGTARPAADGGVVEFT 120 Query: 117 RRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQP 176 R + +PFL R + + + ++ + A Sbjct: 121 ARSTGEPVAVALLPFLARRHAVRAAQLVTETPREAATGYG---RLVRDLLAALTAGFRDD 177 Query: 177 LPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNF-PPADYIALGHIHRAQIIGGMEHV 235 + HLT G R P F P A Y+ALGH+HR Q + V Sbjct: 178 TVNLVMAHLTAAGGKLGGGERSAQSVLEYWVPTSAFPPDAHYVALGHLHRRQSLPAPCPV 237 Query: 236 RYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVE-NLNVPVTQPMAVLKGDLASITAQLE 294 YCGSPI L F E S V +V G V + + + + ++G + +T + E Sbjct: 238 HYCGSPITLDFGEENDSTVVLVVEAEVGTPTRVTAEVPIGSGRRLRTVRGTVDEVTRRAE 297 Query: 295 QWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQR 354 ++ D +L + + +++ +Q L + + + Sbjct: 298 EFGD------DYLRVLLCEPARAG-LRQDVQRLLPN--ALEVRIDPGFAAPVHTTGPSPP 348 Query: 355 ETLSELSVEEVFNRRLALEELDESQQQRL 383 ++ S E+F+ + + + + L Sbjct: 349 ADGADRSPAELFHAYCIARGIADERVEAL 377 >UniRef50_C7M699 Nuclease SbcCD, D subunit n=2 Tax=Capnocytophaga RepID=C7M699_CAPOD Length = 407 Score = 250 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 113/414 (27%), Positives = 187/414 (45%), Gaps = 31/414 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M +LHT+DWHLGQ FY R EHQ FLD LL+ + D ++++GDVFDT +P + Sbjct: 1 MNLLHTADWHLGQTFYQYDRYNEHQYFLDNLLQIIEEQHTDVLLISGDVFDTANPAVASV 60 Query: 61 TLYNRFVVNLQQ--TGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPR- 117 + F+ + ++ +AGNHDS L + ++ +V Q Sbjct: 61 KQFYHFLHQATERFPQLQIIAIAGNHDSPVRLEMPQPLLEDTQVHLVGYVKRNEQREIDY 120 Query: 118 --------RDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADAC 169 G A +PFLR D ++ + + +Y++ A Sbjct: 121 KRLIIPLYERGEVMAYCLAVPFLRLGDTPKNE------DTNPDYTQGVEAFYREITEKAL 174 Query: 170 KLRGDQPLPIIATGHLTTVGASKSD---AVRDIYIGTLDAFPAQNFPPA-DYIALGHIHR 225 + + P+IA GHL +GA SD A R I IG ++ F +FP YIALGHIH+ Sbjct: 175 AIA--KGKPLIAMGHLHALGAELSDEDTAERPI-IGGMEGFKPTSFPNVLQYIALGHIHK 231 Query: 226 AQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGD 285 AQ +GG H+RY GSPIPLSF E V + G+++ ++ + +P+ PM + Sbjct: 232 AQTLGGKAHIRYSGSPIPLSFSEKDYQHQVVAFSLEEGRVQDIKTVPIPLHTPMLSVPER 291 Query: 286 LASITAQLEQWRDVSQE----PPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLL--VR 339 + L + + P +L++++ +E +++ I V + VR Sbjct: 292 PLPVKEVLNALASLPKGTTHTPAPYLEVKVLLNEPAPELKNSILKAIAHKHVRLARIDVR 351 Query: 340 RSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHT 393 ++Q + Q+ TL++L EV +R+ + + + + LF + Sbjct: 352 YQQQQNTKKETLQKEITLNDLQPYEV-LQRVYQNKFQKELPEFYKPLFDEAMEK 404 >UniRef50_D1NTD7 Putative nuclease SbcCD, D subunit n=1 Tax=Bifidobacterium gallicum DSM 20093 RepID=D1NTD7_9BIFI Length = 440 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 100/442 (22%), Positives = 165/442 (37%), Gaps = 44/442 (9%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR+LHTSDWH+G+ F LDWL++T + VD + V+GD++D P + A Sbjct: 1 MRMLHTSDWHIGRRFKGMDLLDYQTRVLDWLIDTIECEHVDVLCVSGDIYDLPRPGADAV 60 Query: 61 TLYNRFVVNLQQ-----TGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQIL 115 ++++ L H+V+ GNHDS A L ++ N + + + + Sbjct: 61 RVFDQAYERLGALQVNGHALHVVMTPGNHDSAARLGVGSRLL-RENVHMRCDLAYIGEPV 119 Query: 116 PRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRG-D 174 G ++ +P+L P A L G + A + + +AD + R D Sbjct: 120 DIAVGGQRLLIYALPYLNPDASRGMLAKLAGHDVACSHAAVMQAALELVHADLERRREQD 179 Query: 175 QPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNF--PPADYIALGHIHRAQIIG-- 230 +P + H GA +SD+ R I +G +D+ PA F DY+ALGH+HR Q + Sbjct: 180 HDVPAVLMAHTFVSGAEQSDSERGIAVGGIDSVPASMFSTSGLDYLALGHLHRPQRVTIP 239 Query: 231 ------GMEHVRYCGSPIPLSFDEC------GKSKYVHLVTFS-------------NGKL 265 RY GS + SF E G K V +V F Sbjct: 240 VTGDAMHTPIARYSGSLLAYSFSERTVPPRLGNGKQVVIVDFEHATGNVPHNTDVLEDAE 299 Query: 266 ESVENLNVPVTQPMAVLKGDLAS-----ITAQLEQWRDVSQ--EPPVWLDIEITTDEYLH 318 + E + + L ++ ++ DV W+ ++I D + Sbjct: 300 DRNEPPVAARVRRVRTLDVQSDEPALVQVSGTPDELIDVLAPLHHDDWVSMQIMLDGPMP 359 Query: 319 DIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDES 378 + + + +E R + ELSV F + + Sbjct: 360 RGLYQRLSAAYAYALEKRTQYVGAMARRPRTMADLSTAPDELSVLSGFVQYSYGRPPEPE 419 Query: 379 QQQRLQHLFTTTLHTLAGEHEA 400 + L+ T H EH + Sbjct: 420 ELAVLKEAVTRV-HAARDEHAS 440 >UniRef50_B2GFI3 Nuclease SbcCD subunit D n=1 Tax=Kocuria rhizophila DC2201 RepID=B2GFI3_KOCRD Length = 407 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 99/419 (23%), Positives = 160/419 (38%), Gaps = 42/419 (10%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M +LHTSDWHLG+ F+ + ++ + + V ++V+GDV+D P + Sbjct: 1 MLMLHTSDWHLGRTFHGVDILDVQARAMTEIVAWVREYDVSVVLVSGDVYDRAQPRTEVV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA--PQILPRR 118 L NR + +++ G +V+ +GNHDS A L IM+ ++ + A P + +R Sbjct: 61 ELLNRTLGEIREAGAQVVLTSGNHDSPARLGFGSQIMSHGGVHLLTTLEDAWRPALFTQR 120 Query: 119 DG------------------------TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLL 154 DG + IP+L P + L+ Q +L Sbjct: 121 DGRLTVSRGAVPAGEPSAGSPVAAAEDTTVAVYGIPYLEP---RAAAPLLDCAPTHQGVL 177 Query: 155 AAITDYYQQHYADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPP 214 A+T A R +P + H GA +D+ R + G L A+ F Sbjct: 178 GAVT-------ARIDDARNRPGVPTVVMAHAFVTGAEPTDSERVVDSGGLGTASAEIFAG 230 Query: 215 ADYIALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVP 274 DY ALGH+HR Q + +E VRY GSP+ SF E SK LV + + V L+ Sbjct: 231 HDYTALGHLHRRQRV--IETVRYSGSPVAYSFSEAEHSKGAWLVDVRSDGVHGVTPLDHA 288 Query: 275 VTQPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVE 334 +A L+G L ++ + E R W + +T E +++ Sbjct: 289 SGMRLARLRGQLDALLTEPEHTRA----QDAWCQVVLTDAERPAAAMERVRTRFPHTVEL 344 Query: 335 VLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHT 393 SR +++ S + F + L S+ L Sbjct: 345 RWEPEGSRAATPLGYSARVAGVASPGELCARFYDHVRGRSLSPSEAAELDDAVAAVCEK 403 >UniRef50_C7GI85 Exonuclease SbcD (Fragment) n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GI85_9FIRM Length = 304 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 74/300 (24%), Positives = 128/300 (42%), Gaps = 20/300 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ LH SD H+G+ S + + L + E A QVDA+++AGD++D P + A Sbjct: 1 MKFLHISDLHIGKRVNEFSMIEDQKYILRQIKEIALEKQVDAVMIAGDIYDKPVPSAEAV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 L+++F+ L G + ++GNHDS + +M+ V + + +D Sbjct: 61 QLFDQFLTGLADCGKKVFAVSGNHDSAERIAFGAQLMSSREVYVSPVYDGEVRCVTCQDA 120 Query: 121 TPGAVLCPIPFLRPRDIITSQ-------------AGLNGIEKQQHLLAAITDYYQQHYAD 167 + +PF+RP + + AG Q+ + + Y Sbjct: 121 YGELCIWLLPFIRPAVVRHAWRKVTEGISIGKKDAGTKQDLAQEDDVETVETYQDALQFV 180 Query: 168 ACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQ 227 + D I H GAS+ ++ ++ +G LD A+ F DY+ALGHIH Q Sbjct: 181 VSHMPVDASKRNILVAHQFVTGASRCESE-EVSVGGLDQIGAEVFDVFDYVALGHIHSPQ 239 Query: 228 IIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLA 287 I E +RYCG+P+ SF E + K +E + + + + ++G + Sbjct: 240 HI-ERETLRYCGTPLKYSFSEAEQKK-----EIKEKGDIFIEKVPLKPLRDLRKIRGTYS 293 >UniRef50_A6TVN1 Nuclease SbcCD, D subunit n=6 Tax=Clostridiaceae RepID=A6TVN1_ALKMQ Length = 406 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 100/418 (23%), Positives = 172/418 (41%), Gaps = 32/418 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLG+ SR AE + FL+ L+ ++D I+VAGD++DT +PP+ A Sbjct: 1 MKILHTSDWHLGKTLEGNSRLAEQERFLEELVTIVNEKEIDLILVAGDIYDTSNPPAQAE 60 Query: 61 TLYNRFVVNLQQTG-CHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQI----- 114 L+ V L G ++++AGNHD+ L + + ++ +I Sbjct: 61 RLFYDSVKKLSANGQRPIIIVAGNHDNPDRLVAASPLAYEHGVVLLGKPKSIVEIGKYGT 120 Query: 115 ----------LPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQH 164 L V+ +P+ + + + + ++ +A + Sbjct: 121 FEIVDSGEGFLEIDLKGERVVILTLPYPSEQRLNELLSEELAEDARRKSYSARIGEIFSN 180 Query: 165 YADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPP-ADYIALGHI 223 ++ + + +A HL +G + + R I +G A + P A Y+ALGH+ Sbjct: 181 LSEKHR----EDTINLAISHLFVMGGEEVGSERPIQLGGSLTVDANHLPQRAHYVALGHL 236 Query: 224 HRAQIIGGMEHV--RYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAV 281 H+ Q + G + Y GSPI S E SK V++V + G VE + + +P+ V Sbjct: 237 HKPQKVVGSGKIKAYYSGSPIEYSKKEVHYSKSVYVVEVNLGLDTKVEEVYLKNYKPIEV 296 Query: 282 LKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRS 341 K I L + + E +W+ +EI TD + + K VE+ V + Sbjct: 297 WK--CKGIKEALIRC-EEDGERDIWVYLEIQTDRVMTQSEIKEMKKLRPHIVEIKPVFQE 353 Query: 342 REQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHE 399 ++ E L + +L + + E L LF+ E E Sbjct: 354 MDREEEELEDMTTMRIEDL--FKDYYIYKNGVHPTEE----LMDLFSEIAQGEGDEDE 405 >UniRef50_D2LF15 Nuclease SbcCD, D subunit n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LF15_RHOVA Length = 390 Score = 248 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 85/391 (21%), Positives = 154/391 (39%), Gaps = 18/391 (4%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR+LHT+DWHLG+ F ++ + +H L+ + Q A+I+AGD+FD +P A Sbjct: 1 MRLLHTADWHLGRQFDGRALDDDHAHVLEQVYAVIVAEQPQALIIAGDLFDRAAPSEAAV 60 Query: 61 TLYNRFVVNL-QQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L+N FV + + T ++V+AGNHDS + + + V L D Sbjct: 61 RLFNDFVQRVVRDTETAIIVIAGNHDSADRIGAMGLLASRNRALVRGPLTAIEVPLILED 120 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 + +PF +AA D + A A + + Sbjct: 121 EFGPVAISGLPFAYEYAARECF--------HDTAIAAPVDVLRAQVAAAKEHVPAGARWV 172 Query: 180 IATGHLTTVGASKSDAVRDIY--IGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRY 237 IA H GA ++ R + +G ++ F A Y+ALGH+HR Q + G EH+ Y Sbjct: 173 IA-AHAFVSGAVVGESERSLSRAVGGIETVTVDVFEGAHYVALGHLHREQTVAGAEHICY 231 Query: 238 CGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWR 297 GS +P +F E K + LV + + + + + ++G + +I ++ Sbjct: 232 SGSLLPFAFGEDDHDKGMLLVDLAEHGGIAKRFIPFQLKRRARTIRGTMEAILSE----- 286 Query: 298 DVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETL 357 +L I +T D D ++I+ + + + + ++ + Sbjct: 287 GALNPSQDFLRIVLTDDARAIDPMKRIREFYPN-ACLLEYEKDIALEAHHPGVARATKLT 345 Query: 358 SELSVEEVFNRRLALEELDESQQQRLQHLFT 388 V F + +++Q + Sbjct: 346 DPAEVIAEFLQFTRNSPPTDAEQALIAQALH 376 >UniRef50_C4FEI0 Putative uncharacterized protein n=1 Tax=Bifidobacterium angulatum DSM 20098 RepID=C4FEI0_9BIFI Length = 487 Score = 248 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 99/441 (22%), Positives = 159/441 (36%), Gaps = 53/441 (12%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 +R+LHTSDWH+G+ F + L WL + VD + VAGDV+D+ P + A Sbjct: 21 IRVLHTSDWHIGRRFKGVDLLEYQRKALQWLANLIDSEHVDVLCVAGDVYDSPRPSTEAV 80 Query: 61 TLYNRFVVNLQQ-----TGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQIL 115 L+N L + ++ GNHDS L +M N + + + Sbjct: 81 RLFNDIFAMLGRMEVNGHPLEIIFTPGNHDSADRLGTGAALMRP-NVHMRCDIETIDEPV 139 Query: 116 PRRDGTPGAVLCPIPFLRPRDII-----------TSQAGLNGIEKQQHLLAAITDYYQQH 164 G + +P+L P + E+ + A I ++ Sbjct: 140 LIGIGGEQLAVYALPYLDPDLSRPVLQSMLDERGGALGAYGEQERDEDGHARIARSHEGV 199 Query: 165 YADACKLRGD---------QPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNF--P 213 A +L + L I H GA D+ R+I +G +D+ PA F Sbjct: 200 MKAAMQLIVNDLAERRRRRPALAAILMAHAFVSGAQSCDSERNISVGGVDSVPAALFSNS 259 Query: 214 PADYIALGHIHRAQII--------------GGMEHVRYCGSPIPLSFDE------CGKSK 253 DY+ALGH+HR Q + RY GS + SF E G K Sbjct: 260 GLDYLALGHLHRPQSVTIAQSDSDESIFHQSRTPQARYSGSLLAYSFSESRTPPVEGNGK 319 Query: 254 YVHLVTFSNGKLESVENLNVPVTQPMAVLKGD--LASITAQLEQWRDVSQEP--PVWLDI 309 V L+ + + + V G+ A I L++ + W+ I Sbjct: 320 SVVLLDVDAASAPKTGGNALGDVRVVDVASGEPAFAQIEGDLDKVLGPLADAYGDDWVSI 379 Query: 310 EITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSELSVEEVFNRR 369 + EY H + +KI A +E V R + + R + E+ V F R Sbjct: 380 TVHLQEYPHGLYQKIDARYAH-ALEKNPVYDRRSSAPAHVMADMRSAVDEMDVLAGFVRY 438 Query: 370 LALEELDESQQQRLQHLFTTT 390 E+ + +++ L+ Sbjct: 439 SLGREVRDDEREVLRTAVEAV 459 >UniRef50_Q2IN32 Exodeoxyribonuclease I subunit D n=3 Tax=Anaeromyxobacter RepID=Q2IN32_ANADE Length = 428 Score = 248 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 119/422 (28%), Positives = 181/422 (42%), Gaps = 32/422 (7%) Query: 2 RILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYART 61 RILHT+DWHLG + R EH+ F+ WLL+TA+ VDA+IVAGDVFD +PP+ A+ Sbjct: 15 RILHTADWHLGHALHGVDRGPEHERFVAWLLDTAEAEAVDAVIVAGDVFDAANPPAGAQA 74 Query: 62 LYNRFVVNLQQ--TGCHLVVLAGNHDSVATLNESRDIMAFLN-TTVVA----------SA 108 L+ RF+ + LVV+ GNHDS + L+ ++ + VV Sbjct: 75 LWYRFLAEAWRRLPRLQLVVVGGNHDSASRLDAVDPLLREMGRLHVVGGVPRGGAGAPDL 134 Query: 109 GHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADA 168 L G A + +P+LR D+ A + E T + + Sbjct: 135 EKLLVPLEDAAGRRAAWVAAVPYLRAADLGAGAADADAAEA--------TRRFYAAALER 186 Query: 169 CKLRGDQPLPIIATGHLTTVGASKSD-AVRDIYIGTLDAFPAQNFP-PADYIALGHIHRA 226 + R ++ATGHL VG S+ + R + +G A PA FP Y+ALGH+H A Sbjct: 187 ARARRAPGEALLATGHLYAVGGKTSELSERRLAVGNQAAVPADAFPADLAYVALGHLHLA 246 Query: 227 QIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVL---- 282 Q +GG E VRY GS +PLSF E G V + + + L VP + + Sbjct: 247 QAVGGRETVRYSGSALPLSFGERGYRHGVVVADLDGEAVRAQRVLRVPRFVELVSVPDGE 306 Query: 283 -KGDLASITAQLEQWRDVSQEPPV---WLDIEITTDEYLHDIQRKIQALTESLPVEVLLV 338 L + A LE + P L++++ + ++ + ++ + Sbjct: 307 APAPLPEVLAALEALPARGEGPDALRPLLEVKVRLERPEPALRALLDQALAGKEARLVRI 366 Query: 339 RRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEH 398 + R L +R L +L E+VF R+ + L F L + E Sbjct: 367 ATTLAGTGRALGDGERRALGDLVPEDVFRRKY-DADYGGPPPDALLEAFRALLQEVESEE 425 Query: 399 EA 400 A Sbjct: 426 GA 427 >UniRef50_B8D1T4 Exodeoxyribonuclease I subunit D n=3 Tax=Clostridia RepID=B8D1T4_HALOH Length = 435 Score = 248 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 84/413 (20%), Positives = 170/413 (41%), Gaps = 27/413 (6%) Query: 2 RILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYART 61 RILHT+DWHLG++ SR E + F++ ++E A ++VD +++ GD+FDT +PP+ A Sbjct: 28 RILHTADWHLGKHLEGWSRYEEQKEFVEEIIEIADDNKVDMVLICGDIFDTTNPPAEAEQ 87 Query: 62 LYNRFVVNLQQTGCHLV-VLAGNHDSVATLNESRDIMAFLNTTV-------VASAGHAPQ 113 L+ + + L + G ++ +++GNHDS L + + + Sbjct: 88 LFFQAMDYLSKGGERVICLISGNHDSPNRLMAPGPLASRQGIFIMDEPRGDRYKLDDDRV 147 Query: 114 I------LPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYAD 167 + + G VL +P+ + + + + + + Q ++ Sbjct: 148 LNRGQGYIELEINGEGVVLTALPYPSESRLNQV---FSWTGDDRAVQESYSRRVGQIFSH 204 Query: 168 ACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFP-PADYIALGHIHRA 226 + + IA HL G + + R I +G ++ P + Y ALGH+HR Sbjct: 205 LEQYYRE-NTINIAMSHLFVAGGQTTRSERPIQVGGSLTVLPEHLPEKSQYTALGHLHRY 263 Query: 227 QIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDL 286 QI Y GSP+ S E K V+LV G+ +E + + +P+ V + Sbjct: 264 QIASSARRAYYSGSPLQYSLSEKDHKKCVNLVELHPGEEARIEQVELTTKKPIEV--WEA 321 Query: 287 ASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRE 346 + ++ + +++ VW + I D+ L + K + + + + + Sbjct: 322 EGVEEAIK-MVEANKDRSVWAYLYINVDKTLLQSEIKKIKEIKKDILCINPITPEEKYEW 380 Query: 347 RVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHE 399 + +L + E+F + E ++ +F++ ++ + E Sbjct: 381 ETIKMPD----EDLDIMELFKEYYRKTKKVEPDDDIIR-MFSSIVNDTREKGE 428 >UniRef50_Q0S486 ATP-dependent dsDNA exonuclease SbcD n=6 Tax=Actinomycetales RepID=Q0S486_RHOSR Length = 394 Score = 248 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 100/380 (26%), Positives = 159/380 (41%), Gaps = 12/380 (3%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHTSDWH+G+ F+ + LD + H VD ++V GDV+D P + A Sbjct: 1 MRILHTSDWHIGRTFHGVDLLTDQARVLDAIAALVAEHGVDVVVVPGDVYDRSIPSADAV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 T+ NR ++ G +V +GNHDS A L ++ + + D Sbjct: 61 TVCNRGFEAIRDAGAVIVATSGNHDSAARLGAGAAFSRAGGLHLMTTVAGIGSPVVLDDE 120 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 IP+L P +I +Q + +L A D + + Sbjct: 121 HGPVAFYGIPYLEP-EITRAQLDVPTARSHAEILDAAMDRVCADLD--GRNDTGPRTRSV 177 Query: 181 ATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGS 240 H VGA + + R I +G ++ A F DY+ALGH+H Q + E++RY GS Sbjct: 178 VLAHAFVVGAEATGSERSISVGGVETVSASAFGGVDYVALGHLHSPQTL--AENIRYSGS 235 Query: 241 PIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVS 300 P+P SF E SK V+LV L +VE +++PV + + L G + + + +RD Sbjct: 236 PLPYSFGERTHSKAVYLVDLDADGLRAVERVDLPVVRGLRQLTGTVQELLED-DTFRDA- 293 Query: 301 QEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSEL 360 ++ +T E D R +Q P V L + E + + + S+L Sbjct: 294 --EDCYVSAVLTDPERPVDAMRSLQT---RFPFAVHLEWQRPEGGDDLRYRDKVHGRSDL 348 Query: 361 SVEEVFNRRLALEELDESQQ 380 + F + E + Sbjct: 349 QITRSFLTDVRSEPSTGEIR 368 >UniRef50_C0W8J2 DsDNA exonuclease subunit n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W8J2_9ACTO Length = 441 Score = 247 bits (631), Expect = 5e-64, Method: Composition-based stats. Identities = 107/452 (23%), Positives = 165/452 (36%), Gaps = 66/452 (14%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHTSDWHLG+ F+ + + H F D L+E + VDA+++AGDV+D PP+ + Sbjct: 1 MRILHTSDWHLGRTFHGRVLDDAHATFADHLVELVEAESVDAVVIAGDVYDRAIPPTDSV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAF-LNTTVVASAGHAPQILPRRD 119 L N + L +V+ GNHDS L + L + P I+P D Sbjct: 61 RLLNDTLNRLTDR-TQVVLAPGNHDSAQRLGFGSALFRPSLAVRAQVAEVDQPVIVPDPD 119 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLL-------------------AAITDY 160 G G ++ +P+L P L + A + Sbjct: 120 GGDGLLVYALPYLDPDATRGVLPALLSERTGEVWADPEDSEEPAAGEPAGPPQPARLARS 179 Query: 161 YQQHYADACKLRG----------DQPLPIIATGHLTTVGASK-SDAVRDIYIGTLDAFPA 209 ++ + A +L G +P++ H VG D+ RDI +G +D+ P+ Sbjct: 180 HEAVVSGALRLVGQDLARRRAASRTRVPVVVMAHAFVVGGQACEDSERDIRVGGVDSVPS 239 Query: 210 QNFP------------PADYIALGHIHRAQIIG------------GMEHVRYCGSPIPLS 245 + F DY+ALGH+HR Q I + Y GSP+P S Sbjct: 240 EVFETLGGSAVADSSGGLDYVALGHLHRPQEIHLPQRPSAGSGASARPRLVYSGSPLPFS 299 Query: 246 FDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVSQEPPV 305 F E K LV + + +E + PV + + G + + Sbjct: 300 FSEAPWPKSSVLVDLTAEGVTRLERIPTPVAHRIETVTGTMEELEGP-----AFDYAVGA 354 Query: 306 WLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSELSVEEV 365 W+ + L R Q E VL + R + + A+ L V Sbjct: 355 WVRAIVRGPLPLGAPARLRQRFGE-----VLAIARQDDGQAPRQAASVTRAADPLEVAHE 409 Query: 366 FNRRLALEELDESQQQRLQHLFTTTLHTLAGE 397 F A E ++Q L + L Sbjct: 410 FLHAAAQSEPTAAEQLVLTQAYEAVLAARRSA 441 >UniRef50_A6LCR3 Putative exonuclease n=6 Tax=Bacteroidales RepID=A6LCR3_PARD8 Length = 416 Score = 247 bits (630), Expect = 6e-64, Method: Composition-based stats. Identities = 117/422 (27%), Positives = 183/422 (43%), Gaps = 38/422 (9%) Query: 2 RILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYART 61 +++HT+DWHLGQ F+ REAEH+AFL +L + D +++AGDVFD +P + A+ Sbjct: 4 KLIHTADWHLGQTFFGYDREAEHEAFLGFLTNLLVERETDVLLIAGDVFDVTNPSAGAQR 63 Query: 62 LYNRFVVNLQ--QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA-------- 111 + RF+ G +V++AGNHDS L ++ LNT++V G Sbjct: 64 RFYRFLREANRLNPGLQIVIIAGNHDSAIRLEAPNPLLEELNTSIVGIVGRTDSGEIDLA 123 Query: 112 --PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADAC 169 L R G A+ +PFLR D + G +A I Y++ YA A Sbjct: 124 SLVVPLRNRAGEREALCLAVPFLRQGDYPAAPEGEL-----DSYVAGIGRMYRRLYAYA- 177 Query: 170 KLRGDQPLPIIATGHLTTVGASKSDAVR--DIYIGTLDAFPAQNFP-PADYIALGHIHRA 226 + + I+A GHL GA SD R +G L++ A F Y ALGHIH+A Sbjct: 178 DAQRNPGEAIVALGHLHATGAELSDDDRSERAIMGGLESVSADTFDAGIAYTALGHIHKA 237 Query: 227 QIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGD- 285 Q IGG E VRY GSP+P+SF E V V G + +E + +P + + Sbjct: 238 QRIGGREAVRYAGSPLPMSFSEKNYRHQVIAVEIEEGSVTEIEAIGIPRVADLMRIPDSP 297 Query: 286 --LASITAQLEQWRDVSQEPPV-----WLDIEITTDEYLHDIQRKIQALTESLPVEVLLV 338 + L + + +L+I + E + +++ V + + Sbjct: 298 LPPKEVLRCLAGLPEPEEGREDESRWPYLEIRVLLTEPDPTFRHRVEEALVGKAVRLTSI 357 Query: 339 -----RRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHT 393 RR E ER L+ + ++ L + R + ++ LF + Sbjct: 358 VPSYPRREGEAEERALSYNDLQKIAPLDM----LRHTFAARYGGELPEEIETLFNEVIRE 413 Query: 394 LA 395 +A Sbjct: 414 VA 415 >UniRef50_A1ZGU7 DNA repair exonuclease n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZGU7_9SPHI Length = 405 Score = 247 bits (630), Expect = 7e-64, Method: Composition-based stats. Identities = 88/412 (21%), Positives = 159/412 (38%), Gaps = 32/412 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHT+DWHLG+ + +R E + L+ + + A VD +IVAGD++DT +P + A Sbjct: 1 MKILHTADWHLGKKLETYTRLPEQEEVLNEICQIADREAVDVVIVAGDLYDTFNPTNDAI 60 Query: 61 TLYNRFVVNLQQTGC-HLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 TL+ + + + + G ++ +AGNHDS + + ++ Sbjct: 61 TLFYKTLKRISKNGTRPVIAIAGNHDSPDRIEAPDPLAKECGIVLLGFPHSEVSPFKLDT 120 Query: 120 GTP-----------GAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADA 168 G P ++ L + + QQ + Sbjct: 121 GLGVTKSEQGFLEMKVPGHDAPLRLIVTPYANELRLKAFLGLTDKEGELRNLLQQRWQQL 180 Query: 169 CKLRGDQPLPIIATGHLTTV--GAS---KSDAVRDI-YIGTLDAFPAQNFP-PADYIALG 221 + + HL + G + ++ + I +IG + P Y+ALG Sbjct: 181 ADAHCNAQGINMLVAHLFMMKKGGEAPVEDESEKSILHIGGAQQIYTEQVPSQMQYVALG 240 Query: 222 HIHRAQIIGGME-HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMA 280 H+HR Q I G V Y SP+ SF E ++KYV ++ GK V + + + + Sbjct: 241 HLHRYQNISGAPCPVVYSSSPLAYSFAEANQTKYVAIIEAEPGKPVEVNRIALEKGKKL- 299 Query: 281 VLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRK-IQALTESLPVEVLLVR 339 L+G + +E ++ ++I I TD YL +RK + + + V+ Sbjct: 300 -LRGRFDEMDKAVEWLKE---NQNALVEITIVTDHYLTAKERKTLNEHHSGIIAIIPDVK 355 Query: 340 RSREQ-RERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTT 390 ++ + + + +L F + D+ RL LF Sbjct: 356 NKNPNLSDKASSIDTSKHIDDL-----FRDYFKSKNNDQEPNDRLMDLFREV 402 >UniRef50_Q67MD2 DNA repair exonuclease n=1 Tax=Symbiobacterium thermophilum RepID=Q67MD2_SYMTH Length = 411 Score = 246 bits (629), Expect = 8e-64, Method: Composition-based stats. Identities = 112/424 (26%), Positives = 178/424 (41%), Gaps = 37/424 (8%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHT+DWHLG+ +SR+ EH+AF+D L + ++D +++AGDVFDTG+P + A Sbjct: 1 MRILHTADWHLGRTLEGRSRQEEHEAFVDELCAMVREERIDLVLIAGDVFDTGNPSAAAE 60 Query: 61 TLYNRFVVNLQQTGCH-LVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP------- 112 LY + L + G +VV+AGNHDS L + + T+ P Sbjct: 61 ELYCDALARLGENGRRAVVVIAGNHDSPDRLTAVQALAQRHGATMFGYPYDDPGVYTPGP 120 Query: 113 ------------QILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDY 160 L AV+ +P+ + A G ++ L + +D Sbjct: 121 DRVQRVAAGPGWAELTVPGVDHSAVVLALPYPSESRLRKLIADTLG---EEELQRSYSDQ 177 Query: 161 YQQHYADACKLRGDQPLPIIATGHLTTVGASKSD-AVRDIYIGTLDAFPAQNFPP-ADYI 218 + A A + ++ T HL G +SD R I +G P A Y+ Sbjct: 178 VKGWLAAAAGRFRPDAVRLV-TSHLYMAGGVESDVVERPIQMGGAYTVHPCAVPETAQYV 236 Query: 219 ALGHIHRAQIIGGM-EHVRYCGSPIPLSFDECGKSKYVHLVTFSN-GKLESVENLNVPVT 276 ALGH+HR Q I G RY GSPI SF+E G K V +V V ++ + Sbjct: 237 ALGHLHRPQEIHGTAAVTRYSGSPISFSFNETGYVKGVTVVEVEPRDPAPRVRHVPISAG 296 Query: 277 QPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVL 336 +P+ ++ AQ+E+W ++P W+ +E+ T+ L ++ L P E + Sbjct: 297 RPL--VRWVAEDGLAQVERWVAEGKDPTAWISLEVHTEHPLT--LEQVHRLRAMRP-EFV 351 Query: 337 LVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAG 396 +R A+ + + L F ++ L LF ++ Sbjct: 352 HIRAVLPAEAEAAATAEPQRLGVDEQFVRFYSQVRGGPPAPE----LVRLFLELVNARDE 407 Query: 397 EHEA 400 E +A Sbjct: 408 EVDA 411 >UniRef50_C9KXE7 Nuclease SbcCD, D subunit n=10 Tax=Bacteroides RepID=C9KXE7_9BACE Length = 416 Score = 246 bits (629), Expect = 9e-64, Method: Composition-based stats. Identities = 117/425 (27%), Positives = 188/425 (44%), Gaps = 37/425 (8%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 +RILHT+DWHLGQ F+ R EH+AFLDWL ++DA+I+AGDVFD +P + ++ Sbjct: 2 IRILHTADWHLGQTFFGYDRTEEHEAFLDWLAGEILRQEIDALIIAGDVFDVSNPSAASQ 61 Query: 61 TLYNRFVVNL--QQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVA----------SA 108 ++Y RF+ + + +V++AGNHDS A L ++ + T V Sbjct: 62 SIYYRFIYRVTAENPNLQIVIVAGNHDSAARLEAPLPLLQAMRTEVRGVVRKLEGGAVDY 121 Query: 109 GHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADA 168 H L R G + +PFLR D Q N + + Y Q Sbjct: 122 DHLCVELKNRQGEVELLCMAVPFLRQGDYPVVQTEGNPYS------EGVRELYTQLLRKL 175 Query: 169 CKLRGDQPLPIIATGHLTTVGAS--KSDAVRDIYIGTLDAFPAQNFP-PADYIALGHIHR 225 K R I+A GHL G+ + D IG L+ + FP Y ALGHIH+ Sbjct: 176 WKRRK-PNQAILAIGHLQATGSEIAEKDYSERTVIGGLECVSPEAFPEQIAYTALGHIHK 234 Query: 226 AQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLK-G 284 AQ + G E+VRY GSPIP+SF E V +V F G + + P + P+ + G Sbjct: 235 AQRVSGRENVRYAGSPIPMSFAERHYHHGVVMVAFDGGCAVDIRRIECPKSIPLISVPSG 294 Query: 285 DLASITAQLEQWRDVSQEPP--VWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSR 342 + LE ++ + +L++++ +E ++++I+ + + + S Sbjct: 295 EPELPEKILEMLGELPETEGTAPYLEVKVLLEEPEPMLRQEIEDVLADKNYRLARIVSSY 354 Query: 343 EQRERVLASQQ------RETLSELSVEEVFNRRLALEELDESQQQRLQHLFTT--TLHTL 394 + ++ + +S L + + ++ E+ E L LF + T Sbjct: 355 RTGAENVEKEETDWKKGLQEMSPLQIAQSAFEKIYQSEMPED----LVDLFQEAYLVATR 410 Query: 395 AGEHE 399 E E Sbjct: 411 KEEEE 415 >UniRef50_C7MLN3 Exonuclease SbcD n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7MLN3_CRYCD Length = 409 Score = 246 bits (628), Expect = 9e-64, Method: Composition-based stats. Identities = 94/425 (22%), Positives = 155/425 (36%), Gaps = 49/425 (11%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ +H +D H+G+ S E + L+ + A +V A+I+AGDVFD P A Sbjct: 1 MKFIHIADLHIGKRVRGFSLIDEQKYTLEQVASYAVQEKVHAVIIAGDVFDKPVAPLEAL 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 + F L +V +AGNHDS L+ + + PQ L + Sbjct: 61 DVLEEFFATLATAHIPVVAIAGNHDSAERLSFGARFREEQFVHIARAFSATPQFLDFTEA 120 Query: 121 T-------------PGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYAD 167 + IPF+RP + + H AI +Y Sbjct: 121 NNDSKEENKEKVAPLRVRVHLIPFVRPVHVRAAFP---------HQAEAIANYTDALRVA 171 Query: 168 ACKLRGDQPLPIIATGHLTTVGASKS----DAVRDIYIGTLDAFPAQNFPPADYIALGHI 223 + + H V ++ + +G LD+ A F DY+ALGHI Sbjct: 172 CANQPLIEKDANLLVAHQFVVHGESEPETCESET-VSVGGLDSVQASVFDAFDYVALGHI 230 Query: 224 HRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKL--------------ESVE 269 H AQ + G + +RY GS P SF E G+ K V L+ S + Sbjct: 231 HTAQSV-GRDTIRYSGSIFPYSFSEAGREKSVTLIDISPSITGANTSPGATNKRLSVTTR 289 Query: 270 NLNVPVTQPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTE 329 +L + + + + G L + +L + +T D L + KI+AL Sbjct: 290 SLPLHENRTLREITGSFEE----LARTAPSDPHADDYLHVTLTDD-ALMNAMEKIRALYP 344 Query: 330 SL-PVEVLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFT 388 + ++ RR + R++ + + + F R EL ESQ ++ + Sbjct: 345 HVMQLDFAHTRRIQTARQQAIKEAHLSN-DPIGLLTDFYRSQTENELSESQIAAIRTIID 403 Query: 389 TTLHT 393 + Sbjct: 404 EEVAA 408 >UniRef50_C9KJP5 Exonuclease n=3 Tax=Veillonellaceae RepID=C9KJP5_9FIRM Length = 367 Score = 246 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 78/379 (20%), Positives = 147/379 (38%), Gaps = 16/379 (4%) Query: 20 REAEHQAFL-DWLLETAQTHQVDAIIVAGDVFDTGSPPSYARTLYNRFVVNLQQTGCHLV 78 A+ + + ++ + V+A+I+AGD++D G PP A L++ F++ + + Sbjct: 3 LTADQREIIMGQIVPFVREEGVEAVIIAGDIYDRGVPPVEAVDLFDEFLMKMAGLRVKVF 62 Query: 79 VLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDGTPGAVLCPIPFLRPRDII 138 +AGNHDS + LN +M A + D + P++ P + Sbjct: 63 YIAGNHDSESRLNFGSRLMREAGIFARGRLDAAMAPIIVEDDFDPVAIYLYPYMEPASVK 122 Query: 139 TSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPIIATGHLTTVGASKSDAVRD 198 + ++ ++ + + + + IA H G + SD+ R Sbjct: 123 AAFGVTEALDFEKA---------HELVIEKSLTGAPEKMRSIAVAHAFLAGGTSSDSERP 173 Query: 199 IYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLV 258 + +G F P Y ALGH+H Q G + +RY GS + SFDE + K LV Sbjct: 174 LAVGGSSNIRPGIFRPFCYTALGHLHNPQR-AGADTIRYSGSLMKYSFDEAEQKKGFFLV 232 Query: 259 TFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLH 318 + + + + ++G A I R + ++++E+ + Sbjct: 233 DLDGSGKVEQKFVPLVPPHDIRRVRGLFADIEGD----RAAYPQSDDYIEVELLDRGIIL 288 Query: 319 DIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDES 378 D+ K++A+ +L + VL RE R Q L+E ++ + + E+L E Sbjct: 289 DVFNKLKAIYPNL-MHVLYPNLQREGTMREQEGQAVLKLTEETLFSQYYEDMTGEKLGEE 347 Query: 379 QQQRLQHLFTTTLHTLAGE 397 QQ + Sbjct: 348 QQAIVHGCLQEIYREERDA 366 >UniRef50_B9JT06 ATP-dependent dsDNA exonuclease protein n=3 Tax=Alphaproteobacteria RepID=B9JT06_AGRVS Length = 379 Score = 246 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 88/402 (21%), Positives = 157/402 (39%), Gaps = 26/402 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHT+D HLG+ S + + A LD +++ +T + D +I+AGD+FD +PP+ A Sbjct: 1 MKILHTADLHLGRQLNGLSLDEDQDAILDQIVDALRTTRADILIIAGDIFDRAAPPATAV 60 Query: 61 TLYNRFVVN-LQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 +N F+ +T + ++AGNHDS + + + L D Sbjct: 61 RQFNAFLSRVAAETTAAVAIIAGNHDSGDRIGAMAIMTDRRRALIQGPIARDMTPLVLHD 120 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 +PF A Q L A + D + + Sbjct: 121 AHGPVAFSALPFAYEFAARECFADPAIATPQDVLAAQVADA---------RRSLPEGARW 171 Query: 180 IATGHLTTVGASKSDAVRDIY-IGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYC 238 + H G + + R + +G ++ + F A Y+ALGH+HR Q + H+RY Sbjct: 172 VVIAHAFVAGGTSGETERPLARVGGIETVSPEIFDGAHYVALGHLHRPQHVS-APHIRYS 230 Query: 239 GSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRD 298 GSP+ SF E + K + LV +E ++ + + + L Sbjct: 231 GSPLAFSFGEASEQKSMTLVDLDADGRVRIETIDFNPPRAVRL--------LRGLLADLL 282 Query: 299 VSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLS 358 ++Q ++ +T L D ++++A+ + ++ R R E A Sbjct: 283 LAQPSQDFIKAVLTDPTPLIDPMKRLRAVFPN-ACQLTYARDERAP-ELKFAISTAAPAD 340 Query: 359 ELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHEA 400 L V F ++ E + E ++ + + L L E A Sbjct: 341 PLEVIADFIAQVRDEPISEPERALITAM----LDDLDAEENA 378 >UniRef50_D2QSS6 Nuclease SbcCD, D subunit n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QSS6_9SPHI Length = 408 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 96/420 (22%), Positives = 154/420 (36%), Gaps = 44/420 (10%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHT+DWHLG+ R E + L +++ A VD ++VAGD+FDT +P A Sbjct: 1 MKILHTADWHLGKRLQDFQRLQEQRDVLAEIVQVANQEDVDLVLVAGDLFDTFNPDPKAE 60 Query: 61 TLYNRFVVNLQQTGCH-LVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ------ 113 L + L G +V +AGNHD+ + + Sbjct: 61 DLLYSTLKELTANGRRTVVAIAGNHDNPDRIEAQDHFGRECGIIFAGFPKTEVRSYELSC 120 Query: 114 ------------ILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYY 161 L + P+ + + L + + Sbjct: 121 DAKLLCSAPGFIELKLPRHDAPVRIIMTPYANETRLRSYL-------GMVSLDDELRQHL 173 Query: 162 QQHYADACKLRGDQPLPIIATGHLTTVGA-----SKSDAVRDI-YIGTLDAFPAQ-NFPP 214 QH++ D+ + HL + +SD R I +G P Sbjct: 174 HQHWSALADTYMDEQGINLLMAHLFVMKRGGEQPEESDDERSILQVGGASVVYTDMIPPQ 233 Query: 215 ADYIALGHIHRAQIIGGME-HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNV 273 Y ALGH+HR Q I G V Y SP+ SF E + KYV LV G+ +V + + Sbjct: 234 IQYTALGHLHRYQQIAGGPSPVIYSSSPLAYSFAEADQQKYVVLVDAEAGQPVTVTPVPL 293 Query: 274 PVTQPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYL-HDIQRKIQALTESLP 332 + + K + ++ R+ P + +I + T +L D +R++Q ESL Sbjct: 294 ATGKRLLRPK--FKRVDEAVDWLRE---NPNCYAEITLQTPTFLTSDERRQLQQAHESLV 348 Query: 333 VEVLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLH 392 + VR E + + +E +F + + +RLQHLF L Sbjct: 349 TIIPDVRDVEETEQETAPAIDLSQP----MEALFTSYFKNKNKGQEPNERLQHLFKEILA 404 >UniRef50_A7LRG6 Putative uncharacterized protein n=5 Tax=Bacteroides RepID=A7LRG6_BACOV Length = 417 Score = 245 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 115/414 (27%), Positives = 184/414 (44%), Gaps = 35/414 (8%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 +RILHT+DWHLGQ F+ R EH FL+WL E + ++DA+I+AGDVFD +P + ++ Sbjct: 2 IRILHTADWHLGQTFFGYDRTEEHGVFLNWLAEEIRQKEIDALIIAGDVFDVSNPSAASQ 61 Query: 61 TLYNRFVVNLQQTG--CHLVVLAGNHDSVATLNESRDIMAFLNTTVVA----------SA 108 ++Y +F+ + +V++AGNHDS A L ++ + T V Sbjct: 62 SMYYQFIYRVTAENPYLQIVIVAGNHDSAARLEAPLPLLQAMRTEVRGVVRKLEGGEIDY 121 Query: 109 GHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADA 168 H L R G + +PFLR D Q N + + Y Q Sbjct: 122 DHLTVELKNRKGEVELLCMAVPFLRQGDYPAVQTEGNPY------AEGVRELYAQLLQRL 175 Query: 169 CKLRGDQPLPIIATGHLTTVGAS--KSDAVRDIYIGTLDAFPAQNF-PPADYIALGHIHR 225 K R + I+A GHL G+ + D IG L+ + F Y ALGHIH+ Sbjct: 176 WKRRTE-NQAILAIGHLQATGSEIAEKDYSERTVIGGLECVSPETFSEQIAYTALGHIHK 234 Query: 226 AQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVL-KG 284 AQ + G E+VRY GSPIP+SF E V +VTF G +E L P P+ + G Sbjct: 235 AQRVSGRENVRYAGSPIPMSFAEKHYHHGVVMVTFDGGCAVDIERLECPKLIPLLSVPNG 294 Query: 285 DLASITAQLEQWRDVSQEPPV--WLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSR 342 + S A LE +++ + V +L++++ +E ++++I+ + + + Sbjct: 295 EPVSPEAVLEALKELPETEAVAPYLEVKVLLEEPEPMLRQEIEDALADKNYRLARIVSTY 354 Query: 343 EQRERVLASQQR------ETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTT 390 + + +S L + + ++ E+ L LF Sbjct: 355 RTETGNTTKENENWKRGLQEMSPLQIAQSAFEKIYQVEMPVE----LTGLFEEA 404 >UniRef50_C5RC55 Exonuclease n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RC55_WEIPA Length = 398 Score = 245 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 79/404 (19%), Positives = 155/404 (38%), Gaps = 21/404 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ LHT+DWH+G+ S AE Q + + A +VD +I+AGD++D G P A Sbjct: 9 MKFLHTADWHIGKELGGYSLLAEQQTAYQQIRDLAVNEEVDGVIIAGDLYDRGIAPISAV 68 Query: 61 TLYNRFVVNLQQT-GCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 + +L T + ++GNHD L R+ + + A + + +D Sbjct: 69 NSLEGMLKDLNITFKMPIYAVSGNHDGATRLGAGREWREKNQLYLNTTLADAFKPVETQD 128 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 + +PF+ P E + I + ++ + + Sbjct: 129 T----QIFLLPFIEPSMARVY---YGITEDEASQYQTINQVMPRIVSEMVAQFKPE-MNH 180 Query: 180 IATGHLTTVGASKSD----AVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHV 235 + H VG+ D + + +G L Q F DY+ALGH+H Q + V Sbjct: 181 VLVTHYYVVGSKNQDYEFTSETNSQVGGLRGLDDQLFQDFDYVALGHLHLRQA-SPSDVV 239 Query: 236 RYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQ 295 +Y GSPI + E K V++V + + + +L G + + Sbjct: 240 QYSGSPIKFNTKEAQSEKGVYIVEI-KNHQVRTSWHPLLPKKDLILLTGTFEQLIDA-DF 297 Query: 296 WRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRE 355 ++ + + I+I + + + + + VEV Q + + + + Sbjct: 298 YQQYERGHKNYFSIKIQGHVTATNARAMLAEIYGDV-VEVKYDLPKLVQNRQDIPEIKAD 356 Query: 356 TLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHE 399 ++ + F + + ++L+ +Q++ + TL L + E Sbjct: 357 DGNDDVMIANFYQFVTGKQLNNNQKKLIDD----TLSQLHQQEE 396 >UniRef50_C4L7Q3 Nuclease SbcCD, D subunit n=9 Tax=Gammaproteobacteria RepID=C4L7Q3_TOLAT Length = 411 Score = 244 bits (623), Expect = 4e-63, Method: Composition-based stats. Identities = 112/416 (26%), Positives = 186/416 (44%), Gaps = 26/416 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M++LHT+DWHLG + R EH++FLDWL+ +D ++VAGDVFDT +P + + Sbjct: 1 MKLLHTADWHLGHRLHGHERYFEHRSFLDWLMNEISQRDIDGLLVAGDVFDTANPSATSW 60 Query: 61 TLYNRFVVNLQQTGCH--LVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP------ 112 L+ +F+ L+Q H ++++AGNHDS + L+ +++ + ++ + Sbjct: 61 QLFYQFLATLRQQRPHLNVIIIAGNHDSPSKLDAPHELLKSFDLHLIGAVERDTDGRLNC 120 Query: 113 ----QILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADA 168 L R G A +PFLR D+ ++ L+A + + YQQ +A Sbjct: 121 DKLAIPLKDRTGCVQAWCAAVPFLRSADLR---MDEEQNGEEDRLVAGVREVYQQVFAHI 177 Query: 169 CKLRGDQPLPIIATGHLTTVGASKSD-AVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQ 227 LR + P++A GH S+ + R + G A P F ADY+ALGH+H AQ Sbjct: 178 DSLRTAEQ-PLLAMGHAYLQSGELSELSERKVLGGNQHALPLSVFNGADYVALGHLHLAQ 236 Query: 228 IIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLA 287 + H Y GSP+PLS E + +T + ++ + + +P T + L A Sbjct: 237 SLSEQVH--YAGSPLPLSLAEQNYPHQLIELTVAEHQITVTDKIRIPRTVDILRLPAQPA 294 Query: 288 SITAQLEQ-----WRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSR 342 + A L + D+ Q +L++ + ++ ++ +I A PV + + Sbjct: 295 PLDAVLAELDNLSLTDLPQNQRPFLEVRVRLEKPEARLRERILAALVDKPVRLARIYTEY 354 Query: 343 EQRERVLASQ-QRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGE 397 +A Q L LS EVF + S L + F L E Sbjct: 355 SGHGLGIADQMTSVPLDSLSPREVFELCY-QRQYASSPDSVLLNCFEELETALENE 409 >UniRef50_B9EBU8 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9EBU8_MACCJ Length = 372 Score = 243 bits (621), Expect = 6e-63, Method: Composition-based stats. Identities = 76/390 (19%), Positives = 157/390 (40%), Gaps = 27/390 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+I+H D H+G+ ++ E L+ L++ +D +++AGD++D P A Sbjct: 1 MKIMHLGDLHIGKTINQQNLLEEQSILLNRLIQDIVDASIDVLVIAGDIYDRSIPSREAM 60 Query: 61 TLYNRFVVNLQQ-TGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 ++ F+ + Q +++++GNHDS L + + + A + Sbjct: 61 KVFETFIYEVNQVQKIPVLLISGNHDSAERLGYGKAWYKGHGMHIGTTIDDALNPVSID- 119 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 G +P++ P + I I + +QH ++ Sbjct: 120 ---GVDFYLVPYIEPVVARHYFED-DSIRTHHDTYKRIFEQIEQHL--------NKDRTN 167 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCG 239 I HL G +++ R+I +GT++ F DY+ LGH+H I E V Y G Sbjct: 168 ILVSHLFVAGGKTTESEREIIVGTIENVSLNLFDAFDYVMLGHLHTPDAIRD-EKVFYSG 226 Query: 240 SPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDV 299 S + SFDE + K + K + V + + + + G + Sbjct: 227 SIMKYSFDEVHQRKGYRIFDL---KKQQVSFITLSPPRDLEYATGTFEDAIK-----LKL 278 Query: 300 SQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSE 359 + + +L +E++ E+++D K++ + +L ++ R+ ++ + LS Sbjct: 279 AVDRNSYLKLELSDMEHINDPMFKLKQVYP----YLLELKPMINNRDIQYKQREVQQLSH 334 Query: 360 LSVEEVFNRRLALEELDESQQQRLQHLFTT 389 L + + F + ++DE+Q ++ L Sbjct: 335 LELVKQFYLDMTDSKMDETQTLLIEQLINE 364 >UniRef50_C8WDX4 Nuclease SbcCD, D subunit n=1 Tax=Zymomonas mobilis subsp. mobilis NCIMB 11163 RepID=C8WDX4_ZYMMN Length = 406 Score = 243 bits (620), Expect = 8e-63, Method: Composition-based stats. Identities = 122/413 (29%), Positives = 182/413 (44%), Gaps = 30/413 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHT+DWH+GQ SRE EHQ F D L + T VDA+++AGDVFD +P A+ Sbjct: 1 MRILHTADWHIGQTLNGWSREYEHQVFCDALRDVIVTEGVDALLIAGDVFDGINPSGEAQ 60 Query: 61 TLYNRFVVNL--QQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP------ 112 L + +V+ AGNHD L ++ L V+ + Sbjct: 61 RLLYAAIAGFLRANPRLQIVITAGNHDPAQRLEAPEAVLNELGVHVLGTLRRDAADVDLQ 120 Query: 113 ---QILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADAC 169 L GT A + +PFLR D+ Q G G + + A +DA Sbjct: 121 RHLIPLCDNTGTVHAHVLAVPFLRQADLPGLQLGATG--GAESAVTAAVRALHLAMSDAA 178 Query: 170 KLRGDQPLPIIATGHLTTVGASKSDA-VRDIYIGTLDAFPAQNFPPA-DYIALGHIHRAQ 227 + + LPIIA GHLT G +S+ R I IG A P FPPA Y+ALGH+HR Q Sbjct: 179 ETQA-GGLPIIAMGHLTCSGGLESEGAERRILIGGEHAVPPDIFPPALSYVALGHLHRPQ 237 Query: 228 IIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGD-- 285 + G VRY GSP P+S E G V L+ +G ++ +P PM L Sbjct: 238 SLDG-GRVRYSGSPFPMSAAEIGYDHGVTLLDLDDGFAP--RHIPLPRPVPMHRLPATGV 294 Query: 286 --LASITAQLEQW---RDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRR 340 LA + + L + ++ ++ + + D + I + +AL E+LPV + + Sbjct: 295 APLAEVASALNALDLQCETPRDAQPFIYLSLIADRPVTQIAAEAEALIEALPVRLAGLTI 354 Query: 341 SREQRERVLASQQRETLSELSVEEVF---NRRLALEELDESQQQRLQHLFTTT 390 +R + E + L++ S E++F + D + + + Sbjct: 355 ARSEAEGTPETPPP-NLADTSPEDLFLMAFNQSHGVNPDTAHLAAFRDALSEI 406 >UniRef50_C9L5R8 DNA repair exonuclease n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L5R8_RUMHA Length = 413 Score = 242 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 102/419 (24%), Positives = 175/419 (41%), Gaps = 31/419 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHT+DWH+G+ KSR E + L+ + A + D I +AGDVFD G P + A Sbjct: 1 MKILHTADWHIGKLLEGKSRLEEQRIVLEQFVSIADETEADVICIAGDVFDNGHPSAGAE 60 Query: 61 TLYNRFVVNLQQTGCH-LVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP------- 112 L + L + G +V++AGNHD + L + + + Sbjct: 61 MLLYHTLKELSRQGQRLVVLIAGNHDQPSRLEAIVPLAREHGIIIYGTPKTKIPSGKYGN 120 Query: 113 -QILPRRDG-------TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQ--HLLAAITDYYQ 162 +I +G AV +P++ + + ++++ A I + +Q Sbjct: 121 FEIESLEEGVFSFSHKGEKAVFVCVPYVSEKTLNEVLYREEDSDEKRAADYAAKIGELFQ 180 Query: 163 QHYADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNF-PPADYIALG 221 + R + I H+ T+G K + + I +G P + F P A Y+ALG Sbjct: 181 KK-----ASRYEYNTINILMSHVFTLGCKKDGSEQGIMLGNSYLLPPEVFPPKAQYVALG 235 Query: 222 HIHRAQIIGG-MEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMA 280 H+HR Q + G +RY GSP+P E +K LVT K VE+ +P+ Sbjct: 236 HVHRPQKVVGSHGRIRYSGSPLPYRLQETVIAKQCSLVTLHPQKEAVVEDFYFDNPKPIE 295 Query: 281 VLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRR 340 K S L++ + +Q P ++ ++I TD Y+ + Q K + +EV+ V Sbjct: 296 --KWICKSYDEALKKC-EENQNRPCYVYLQIYTDTYIREEQLKELKSRKEDILEVIPVFP 352 Query: 341 SREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHE 399 E ++ ++ L + + ++ +E + LQ + A HE Sbjct: 353 ETETPKKGTVFTEKSFLE---LFLDYYQKKKGVLPEEEIVETLQEILIKEDENEADFHE 408 >UniRef50_A4X568 Exodeoxyribonuclease I subunit D n=3 Tax=Micromonosporaceae RepID=A4X568_SALTO Length = 382 Score = 242 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 104/400 (26%), Positives = 167/400 (41%), Gaps = 22/400 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWH+G+ +SR EH+A L ++E A+ D II+AGD++DT +P A Sbjct: 1 MKILHTSDWHVGKVLKGRSRAEEHKAVLAGVIEVARREAPDLIIIAGDLYDTAAPTPEAT 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPR--- 117 L R + L++TG +V + GNHD+ A L+ R T+ S P Sbjct: 61 RLVTRALTALRRTGADVVAIGGNHDNGAALDALRPWAEAAGITLRGSVREDPNEHVIDGT 120 Query: 118 RDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPL 177 +G L +PFL R + + + + D+ + A + + Sbjct: 121 TNGGEQWRLAALPFLSQRYAVRAVEMYELTAAEAN--QTYADHLGRIVARLTESFAEPDR 178 Query: 178 PIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPP-ADYIALGHIHRAQIIGGMEHVR 236 + T HLT VGA+ RD + A PA FP A Y+ALGH+HRAQ + G +R Sbjct: 179 VHLVTAHLTVVGATTGGGERDAHTVLGYAVPATVFPGTAHYVALGHLHRAQRVDGGCPIR 238 Query: 237 YCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQW 296 Y GSP+ + F E V +V + V + +P + ++G LA + Sbjct: 239 YSGSPLAVDFGEQENVPSVTVVEVTATTAAQVREVPIPAAASLRTVRGTLAQLAEV---- 294 Query: 297 RDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRET 356 + P WL + + + ++ + L L +R E + + Sbjct: 295 ----EVPDAWLRVFVREQ-----PRAGLREEVQELLPRALEIRIDPELVPAPGSGTRVAQ 345 Query: 357 LSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAG 396 + S E+F L + ++ LF + Sbjct: 346 RAGRSPRELFGDYLDDRGHADDD---VRGLFDELFEEVEH 382 >UniRef50_Q73RC0 Nuclease SbcCD, D subunit, putative n=1 Tax=Treponema denticola RepID=Q73RC0_TREDE Length = 383 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 86/398 (21%), Positives = 151/398 (37%), Gaps = 23/398 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHT+D HLG++ Y + + LD + + A+I+AGD++D PP+ Sbjct: 1 MKILHTADLHLGKSLYESPQIERQKKMLDDIHKILLKDDYAALIIAGDIYDRSIPPAEYV 60 Query: 61 TLYNRFVVNLQQ--TGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRR 118 L++ F+ + + + ++ GNHDS L+ I++ N + A G + Sbjct: 61 ALFDSFLSAVHKDCPNTAVFIIPGNHDSAERLSFGSKILSSSNIHIAAGIGKLCSPIIIA 120 Query: 119 DGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLP 178 +PFL + E+ L Q + K D +P Sbjct: 121 QNGEKVQFFLMPFLHLG---------SFSEENSELKLTSQSEMAQEASRRLKEAVDPSMP 171 Query: 179 IIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYC 238 + H+ T+ S + R +GT + F Y ALGH+H+ Q + + + Y Sbjct: 172 SVLAAHIFTLNGESSSSERAF-LGTAEYVSPALFDFFTYTALGHLHKMQKV--TDRMYYS 228 Query: 239 GSPIPLSFDECGKSKYVHLVTFS---NGKLESVENLNVPVTQPMAVLKGDLASITAQLEQ 295 G+P+ +FDEC K V V G VE + + + M+ L+G Sbjct: 229 GAPLTYAFDECSTEKVVLSVDVDCKTQGFPVRVEKIPISPLRKMSRLEGSFFEFFNTD-- 286 Query: 296 WRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRE 355 +L+I +T + +Q L + + E + ++ Sbjct: 287 --KFDAYKDDFLEINLTGSAVIQSPMSLLQQKFPYLLNLHQEAVAAELKDEEQIHILKKN 344 Query: 356 TLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHT 393 E + E F L + +DE + Q LF + Sbjct: 345 IEDEDVIFENF--MLFEKTIDEEPSAKKQELFKSLCKE 380 >UniRef50_A6DE84 Nuclease SbcCD, D subunit n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DE84_9PROT Length = 362 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 105/398 (26%), Positives = 198/398 (49%), Gaps = 36/398 (9%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M++LHTSDWHLG F+ R+ E + LD++++T + +VD +++AGD+FD P A Sbjct: 1 MKVLHTSDWHLGNKFFGYDRDDEFELVLDFIIKTIKKEKVDVLLIAGDIFDVYYPSQSAL 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 +Y F++ ++ H+ ++AGNHDS++TL+ +DI+ L+ V++ + ++ Sbjct: 61 KVYYSFLMKVKPYLKHIFIIAGNHDSISTLSAPKDILNALDIKVISGDENVEDMIV---N 117 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 +P+LR + K +L+ IT +Y++ + I Sbjct: 118 VGDVDFLLVPYLREILLREKY-------KNDNLIENITHFYKEIISK-------SNNKKI 163 Query: 181 ATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGS 240 TGHLT + + KS + +DIYIG ++ A+ F ADY+ LGH+HR Q I +V Y GS Sbjct: 164 LTGHLTALNSKKSGSEKDIYIGKIEGVSAEIFDGADYVGLGHLHRYQEIKK--NVVYSGS 221 Query: 241 PIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVS 300 + +SFDE K V + T K +++P+ + + + GD +I +LE+ Sbjct: 222 ILKMSFDENDDKKLVIIDTDDFSKKV----VDIPIFRQIKTISGDKKTIKNELEKI---- 273 Query: 301 QEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSEL 360 + +E+ DE + + + ++ L + + +++ S ++ + + + +T+ ++ Sbjct: 274 NLSKLKAFVELIFDETIDNTE--VEELKKEFDN-IEIIKYSYKKESKEINFE--KTIKDI 328 Query: 361 SVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEH 398 S+ +F D + L+ F L L E+ Sbjct: 329 SINAIFEEIFK----DSINFEELKDEFMQILEGLEDEN 362 >UniRef50_O67727 ATP-dependent dsDNA exonuclease n=2 Tax=Aquificaceae RepID=O67727_AQUAE Length = 379 Score = 241 bits (615), Expect = 3e-62, Method: Composition-based stats. Identities = 86/395 (21%), Positives = 170/395 (43%), Gaps = 18/395 (4%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR++H SD H G+N SR + L+ +++ + ++ D ++VAGDVFD +P + A+ Sbjct: 1 MRLIHLSDIHAGKNLGRVSRNEDVVYALNQVVDFCKENKPDLVLVAGDVFDKANPDNEAK 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 + F + L VV++GNHDS + + ++ ++ VV +L + Sbjct: 61 EIIFDFFLKLHSLNIPSVVISGNHDSYEFMKSLKKLLQVIDVYVVPKPNLEECVLDVK-- 118 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 G + +P+ P + + ++AG + L+ Y + DA + Sbjct: 119 --GLKIACLPY--PSERVLTRAGEDSKLSYAVLVEKAIKYLYEKVKDAPLK--------V 166 Query: 181 ATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFP-PADYIALGHIHRAQIIGGME-HVRYC 238 HL G+ + R+ I A P DY+ALGH+HR Q I HV Y Sbjct: 167 LLSHLFIAGSKYTRTEREATITDYYAVEPSAIPEGFDYVALGHVHRYQRIEKAPTHVYYT 226 Query: 239 GSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRD 298 GS L F E G+ K+ + V G+ VE + + + P+ + + + +LE+ +D Sbjct: 227 GSLFQLDFSEAGQEKFFNFVELKEGEPPHVEAIKLSLKNPLHTFEINQENYAKELEKIKD 286 Query: 299 VSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLS 358 V + + + +H + K++ +++ L+ ++R+ ++ + L+ Sbjct: 287 VQGYIK--VHLIVKDKTKMHLVAEKVKEALGEKLIKLELLTPEEAIKKRLEEEREIQKLN 344 Query: 359 ELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHT 393 L + + + E+ + + + L + Sbjct: 345 LLDLYRDYFKESYGREVPQEIIKTVSQLLEQVHES 379 >UniRef50_C7XXV6 Nuclease SbcCD n=1 Tax=Lactobacillus coleohominis 101-4-CHN RepID=C7XXV6_9LACO Length = 374 Score = 241 bits (614), Expect = 5e-62, Method: Composition-based stats. Identities = 73/391 (18%), Positives = 145/391 (37%), Gaps = 25/391 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR LHT DWH+G++ + A+ A + + + A+ QVDA+++AGD++D P A Sbjct: 1 MRFLHTGDWHIGKHLAGYNLLADQHATFEKIRQIAKAEQVDAMVIAGDLYDRTIPSEAAT 60 Query: 61 TLYNRFVVNLQQTG-CHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 + L + ++GNHDS L + + A + D Sbjct: 61 RELTSELAELNIHDQLPIFAISGNHDSATRLGVGSQWFTSNDFYLNTKFSQAFMPIEFAD 120 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 L +PF +++ A + I ++ A K D Sbjct: 121 T----QLFLLPFFGLQEVRNYFAD--------DQIKDINTAMKKIVAAMKKRFVD-GKRH 167 Query: 180 IATGHLTTVGASKS-DAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYC 238 + H G+ ++ D+ I +G L A DY+ALGH+H + ++Y Sbjct: 168 VLVAHFFAAGSQRTADSETMIEVGGLSAVNTDLLTDFDYVALGHLHNKNALQEA-RIKYS 226 Query: 239 GSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRD 298 GSP+ S E K V +V + ++ + +P + V++ + +T Sbjct: 227 GSPMKFSVSEANMEKGVWIVDTAP---FNIRWVELPAIHEIHVIESSMDQLTDPTFA--- 280 Query: 299 VSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLS 358 + I++T + + D+ +++ + + +Q++ S Sbjct: 281 KQYSKEDYYAIKLTDRQIIPDVMNRLRQYYPQIISLGRKYGFAGPHENYHHLNQRQ---S 337 Query: 359 ELSVEEVFNRRLALEELDESQQQRLQHLFTT 389 + F + +L+ Q++ + Sbjct: 338 PKQLFANFFEKTVGTKLNAEQEKIVDTTLAE 368 >UniRef50_C8XKJ7 Nuclease SbcCD, D subunit n=2 Tax=Actinomycetales RepID=C8XKJ7_NAKMY Length = 388 Score = 240 bits (613), Expect = 6e-62, Method: Composition-based stats. Identities = 97/399 (24%), Positives = 170/399 (42%), Gaps = 22/399 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ LHT+DWH+G+ +SR E +A + ++ A+ HQ+DA+++AGD++D+ +P + A+ Sbjct: 1 MKFLHTADWHVGKTLKGRSRLDEQRAVIGQIVGYAREHQIDAVLIAGDLYDSSAPTADAQ 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA----PQILP 116 L + ++ L+ TG ++ +AGNHDS AT + R ++ ++ T+V A Sbjct: 61 QLVVQALLALRDTGAKVLAIAGNHDSAATFDAYRPLLDAVDITLVGRVRPAARGGVVSFD 120 Query: 117 RRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQP 176 R + +PFL R + + + + ++ D + D+ Sbjct: 121 ARSTGERVNVAVLPFLSQRYAVRAAQLVASTPSE---MSRDYDAMVREVIDSLAAGFTPD 177 Query: 177 LPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPP-ADYIALGHIHRAQIIGGMEHV 235 + HLT VG + R PA FP A Y+ALGH+HR Q + V Sbjct: 178 AVSVMMAHLTVVGGTFGGGERAAQSIFEYHVPAVAFPAHAHYVALGHLHRRQTLPAPAPV 237 Query: 236 RYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQ 295 Y G+P + F E + V LV S ++ +L + + + + G A I + E+ Sbjct: 238 VYSGAPFAVDFGEQDNTSVVCLVQASPSTPATITDLPITAGRRLRTVHGTAAEIVGRAEE 297 Query: 296 WRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRE 355 + D +L + I + ++ + L VR E + R Sbjct: 298 FGD------DFLRVIIREP-----ARAGLREEITDVLPNALEVRIDTEFALSITNQAART 346 Query: 356 TLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTL 394 + S E+F A + + R+Q LF L Sbjct: 347 DHRDRSPAELFGDFCAARGVADE---RVQSLFERLHDEL 382 >UniRef50_D1BIQ6 Exodeoxyribonuclease I subunit D n=2 Tax=Actinobacteria (class) RepID=D1BIQ6_SANKS Length = 394 Score = 240 bits (612), Expect = 8e-62, Method: Composition-based stats. Identities = 101/403 (25%), Positives = 157/403 (38%), Gaps = 15/403 (3%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHTSDWHLG+ + A+LD L+E ++ VDA++VAGDV+D PP A Sbjct: 1 MRILHTSDWHLGRTLHGVDLLDHQAAYLDHLVELVRSESVDAVVVAGDVYDRAIPPVEAV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 TL + + L + +VV GNHDS L ++ V A + + Sbjct: 61 TLLSTALARLAEI-TQVVVTPGNHDSATRLGFGAEL-WREGVHVRARVADIGRPVELETT 118 Query: 121 TP-GAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRG--DQPL 177 A++ +P+L P T + + A ++ AD Sbjct: 119 DGAPALVYALPYLDPDAARTVLREEDEPPLARSHEAVTGAAMRRVRADLAARGATVSARP 178 Query: 178 PIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQII--GGMEHV 235 + H VG S++ RDI +G +D PA DY+ALGH+H AQ + GG Sbjct: 179 RSLVVAHAFVVGGEASESERDIRVGGVDTVPAAVLEGVDYVALGHLHGAQRVATGGGTVG 238 Query: 236 RYCGSPIPLSFDECGKSKYVHLVTFSNGKLE-SVENLNVPVTQPMAVLKGDLASITAQLE 294 RY GSP+ SF E + K LV + + + PV + ++ + G L + Sbjct: 239 RYSGSPLAYSFSEMRQRKSTALVDLGPDGVVGEPQLVPAPVPRRLSEVSGSLDDLLGA-- 296 Query: 295 QWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQR 354 W+ + +T ++ +++A V + R L Sbjct: 297 ---AGEAHVDDWVRVTVTDPARPREMNARLKARFP--HVLAMAHRPPERSARESLTLAVT 351 Query: 355 ETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGE 397 L V F + + D + L+H F T Sbjct: 352 TASDPLVVAADFVAHVTGAQPDVRESAALRHAFETAAAAERSA 394 >UniRef50_B6QZR0 Nuclease SbcCD, D subunit n=2 Tax=Alphaproteobacteria RepID=B6QZR0_9RHOB Length = 415 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 115/414 (27%), Positives = 190/414 (45%), Gaps = 27/414 (6%) Query: 2 RILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYART 61 +ILHT+DWH+GQ+ SR EHQ F L E + H+VDA++VAGDVFD +P + A Sbjct: 4 KILHTADWHIGQSLNGWSRTYEHQQFFKELEELIERHEVDALVVAGDVFDNQNPSADATQ 63 Query: 62 LYNRFVVNLQQTGCHLVVL--AGNHDSVATLNESRDIMAFLNTTVVA---------SAGH 110 + + ++ HLV + AGNHD + + + V H Sbjct: 64 MLYEALARFREKRPHLVTVLTAGNHDPAGRVEAPGVLFQKIGVQAVGMVRRHDGLLDLSH 123 Query: 111 APQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACK 170 L DG A + +PF PR + E+ ++ A+ + Y+ A + Sbjct: 124 HLVPLKDSDGAVKAYVLALPF--PRATDLPGLSFSSSEEGSPVVRAVAELYEAAVQQARE 181 Query: 171 LRGDQPLPIIATGHLTTVGASKSDA-VRDIYIGTLDAFPAQNFP-PADYIALGHIHRAQI 228 G+ +P+IATGHL G +S+ R I IG A P + FP Y+ALGH+H+ Q Sbjct: 182 QIGE--MPLIATGHLHVAGGLESEGAERRILIGGEHAMPWEQFPDDLTYVALGHLHKPQK 239 Query: 229 IGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGD--- 285 + G E +RY GSP PLS E V+L++FS+ + S+E L + P LKGD Sbjct: 240 V-GKETIRYSGSPFPLSVTEQHYKHGVNLLSFSDAGVLSIERLALTRPVPFHRLKGDGGL 298 Query: 286 -LASITAQLEQWR---DVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRS 341 L + L+ ++ E ++ +++ ++ ++ + PV V Sbjct: 299 LLEELVPALDALELDGNLPVEQQPFVHVDLRPQVSAGGLKAEVDQILAEYPVRSAGVSVL 358 Query: 342 REQRERVLASQQRE--TLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHT 393 R++++ V++++ LSE+ +E+F E + + L + + Sbjct: 359 RQKQQEVVSAEAESLIRLSEIGPDELFKSAFERVHGMEPEAKHLDYFYRAIAEA 412 >UniRef50_B7GYJ5 Exonuclease sbcD-like protein n=18 Tax=Acinetobacter RepID=B7GYJ5_ACIB3 Length = 422 Score = 239 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 102/415 (24%), Positives = 169/415 (40%), Gaps = 32/415 (7%) Query: 3 ILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYARTL 62 LHTSDWHLGQ FY+ SR EHQ FL WLL Q Q A+++AGD+FD +P S A+ Sbjct: 9 FLHTSDWHLGQFFYNHSRHYEHQQFLSWLLTQIQEKQPHALLIAGDIFDVINPGSQAQKQ 68 Query: 63 YNRFVVNLQQ--TGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVA----------SAGH 110 +F+ + + +++AGNHDS + + ++ N V Sbjct: 69 LYQFLADAHRIAPHMQTLMIAGNHDSGYRIEQVEPLLEKYNAKTVGVVRWNEDKTLDLDR 128 Query: 111 APQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACK 170 + ++ A +PFLR +I G + Y Q K Sbjct: 129 LLLPIYNQNQDIVAWCLALPFLRSAEI-------TGFNEHTTNSKNAIAYLHQQLIAEAK 181 Query: 171 LRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPP-ADYIALGHIHRAQII 229 R +I H G SD+ R I IG +A F DY+ALGH+H+ Q + Sbjct: 182 RRKTPDQALILMSHAHMQGGETSDSERPIIIGNEEALSTTLFEDAVDYVALGHLHKPQKV 241 Query: 230 GGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLE----SVENLNVPVTQPMAVLKGD 285 G H+RY GSPIPLSF E V V + E + +P + ++G+ Sbjct: 242 -GQPHIRYSGSPIPLSFSEINYKHQVVEVKIDPAQDTDSRLQFEAVEIPRCIQLHRIRGE 300 Query: 286 LASITAQLEQWRD---VSQEPPVWLDIE-ITTDEYLHDIQRKIQALTESLPVEVLLVRRS 341 L + QL+ + + ++DIE + +++++ +A ++ + R Sbjct: 301 LNEVLQQLKALPHGVIENIDHREYVDIEYYSLTPPQPNLRQQFEAALPPDRYRLVRISRQ 360 Query: 342 REQRERVLASQQRE-TLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLA 395 ++ ++ + L + E++F + + F + + Sbjct: 361 YVNKDATNSNTTQHIALEPPTPEKLFQNIWEKQGYSADD--AVLKDFLSLVQEAQ 413 >UniRef50_A8L1U9 Nuclease SbcCD, D subunit n=2 Tax=Actinomycetales RepID=A8L1U9_FRASN Length = 387 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 100/399 (25%), Positives = 173/399 (43%), Gaps = 21/399 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ LHTSDWHLG+ ++R E +A L ++ A+ H+VDA++VAGDV+D+ +PP+ A+ Sbjct: 1 MKFLHTSDWHLGKTLKGRNRLDEQRAVLGEIIGIARKHEVDAVLVAGDVYDSAAPPAAAQ 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA----PQILP 116 L + +V L+ TG +VV+AGNHD T + R +M+ T+V + A Sbjct: 61 QLAVQALVALRGTGAEVVVIAGNHDHQPTFDAYRPLMSAAGITLVGTPRTAADGGVVTFR 120 Query: 117 RRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQP 176 + +PF+ R + + + Q AA D + + + D Sbjct: 121 APGTGEPVTVAALPFVSQRYAVRAADLVTQTPDQ---TAARYDQVVRALMEQLRSGFDDN 177 Query: 177 LPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFP-PADYIALGHIHRAQIIGGMEHV 235 + HLT R A FP A Y+ALGH+HR Q + V Sbjct: 178 AVNLVLAHLTVTNGLFGGGERMAQSIFEYHVSAAAFPADAHYVALGHLHRRQTLAAPCPV 237 Query: 236 RYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQ 295 Y G+P+ + F E + V LV S G V ++ + + + ++G +A + AQ + Sbjct: 238 VYSGAPLAVDFGEQENTNVVCLVEASPGVPAQVTDIALTAGRRLRTVRGTVAELAAQAPE 297 Query: 296 WRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRE 355 + L + + ++ ++Q L LP + + + + Sbjct: 298 LAE------DLLRVVVREPARAG-LRDEVQEL---LPNALEVGIDPELRVALGGSRPSAA 347 Query: 356 TLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTL 394 L+ S E++F A E+ ++ R++ LF + Sbjct: 348 ALARRSPEDLFREFCAAEQFED---PRVEALFARLHDDV 383 >UniRef50_C8PYK6 Nuclease SbcCD, D subunit n=2 Tax=Pseudomonadales RepID=C8PYK6_9GAMM Length = 507 Score = 237 bits (605), Expect = 4e-61, Method: Composition-based stats. Identities = 105/275 (38%), Positives = 157/275 (57%), Gaps = 14/275 (5%) Query: 3 ILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYARTL 62 +LHTSDWHLG+ Y K R E + FLDW L+T + +VD +++AGD+FDT +P + A+ L Sbjct: 4 LLHTSDWHLGRRLYGKPRYDEFKQFLDWQLQTLREQKVDVLLIAGDIFDTTAPSNQAQNL 63 Query: 63 YNRFVVNLQQTGC-HLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ----ILPR 117 Y F+ + T C H++++AGNHDS + L + ++ N ++ S P L Sbjct: 64 YYDFLSQVCHTDCRHVIIVAGNHDSASFLEAPKQLLKAFNIHIIGSMTDTPTDEVITLLD 123 Query: 118 RDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQP- 176 + G P ++ +P+LR RD+ T G +K++ L I +Y Q A + Sbjct: 124 KSGQPELIVMAVPYLRDRDVRTVGHGERLDDKERKLAQGIKAHYAQIADIAIAQQAQLQA 183 Query: 177 -----LPIIATGHLTTVGAS--KSDAVRDIYIGTLDAFPAQNF-PPADYIALGHIHRAQI 228 +PI+ATGHL TVG + D VRD+Y+G+L + A+ F P DY+ALGH+H Q+ Sbjct: 184 KYKRIIPIVATGHLFTVGGQTMEGDGVRDLYVGSLGSIGAEIFHPQIDYVALGHLHIPQV 243 Query: 229 IGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNG 263 +GG H+RY GSPI + F E + K VHL+ F Sbjct: 244 VGGQPHIRYAGSPIAMGFGESRQQKQVHLLRFDAK 278 Score = 85.2 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 39/132 (29%), Positives = 69/132 (52%), Gaps = 2/132 (1%) Query: 268 VENLNVPVTQPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQAL 327 +++L VPV QP+ LKGD +I L + Q VWL++ E + D+ KI L Sbjct: 378 LQSLPVPVFQPIQTLKGDWQTIKTSLHSLKKAQQS--VWLEVVYDGQEVVGDLSEKIAEL 435 Query: 328 TESLPVEVLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLF 387 + +EVL ++ +++ + + + + E+L EL+ +VF R L ++ E Q+ L + Sbjct: 436 VKDSRLEVLRIKNQQKRDQVMQSQRMDESLEELNPTQVFERCLIAHQVLEEQKPMLWSRY 495 Query: 388 TTTLHTLAGEHE 399 T L +L G + Sbjct: 496 TEVLESLQGGQQ 507 >UniRef50_B6WA19 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6WA19_9FIRM Length = 364 Score = 237 bits (604), Expect = 6e-61, Method: Composition-based stats. Identities = 81/393 (20%), Positives = 154/393 (39%), Gaps = 34/393 (8%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M++LH SD H+G+N S S + + LD +L+ + ++D +I+AGD+FDT P S + Sbjct: 1 MKLLHLSDLHIGKNIGSYSLLEDQKYCLDQILDIIKNEKIDIVIIAGDIFDTSIPNSESM 60 Query: 61 TLYNRFVVNLQ-QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 +Y+ FV + ++ ++GNHDS L S+ + + S+ L D Sbjct: 61 KVYSDFVDKIIFDLKKKIIAISGNHDSGKRLEISKSFFEKNSYYIFGSSFDKS--LTLED 118 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 PIP++ + + TD Y+ D D Sbjct: 119 EFGLVNFYPIPYISLARAKN---------EIDPNIENFTDLYRILLKDI-----DYNDRN 164 Query: 180 IATGHLTTVGASKSD----AVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHV 235 + H + D + + IG DA A F DY+ALGH+HR + E + Sbjct: 165 VLISHCYANEKAFEDEEIEGEKPLTIGGNDAMDANLFENFDYVALGHLHRKHFVID-EKI 223 Query: 236 RYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQ 295 RYCG+ + SF E + K V +V + S++ + + ++ +I Sbjct: 224 RYCGTFMKYSFSEVRQKKSVTVVDLKDN--ISIKEIEIRPLNDFCQIEDYFENILKM--- 278 Query: 296 WRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRE 355 + +++ + D+ + K++ + + + + E Sbjct: 279 -----ENSNEYIEFILKDDQPIDSPMAKLKIKFP--HAVSIRYKNTIDLEGYDDIEIDLE 331 Query: 356 TLSELSVEEVFNRRLALEELDESQQQRLQHLFT 388 +LS + + + F + E + E + + + Sbjct: 332 SLSTMEIFQKFYKFKMDENMSEKDNEIFKKVIQ 364 >UniRef50_A5WEF9 Nuclease SbcCD, D subunit n=3 Tax=Psychrobacter RepID=A5WEF9_PSYWF Length = 537 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 109/275 (39%), Positives = 159/275 (57%), Gaps = 14/275 (5%) Query: 3 ILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYARTL 62 ILHTSDWHLG+ Y + R E +AFL WL +T Q +QVD +IVAGDVFDT +P + A+ L Sbjct: 16 ILHTSDWHLGRRLYGQLRYHEFEAFLAWLTQTLQQYQVDVLIVAGDVFDTMTPSNKAQAL 75 Query: 63 YNRFVVNLQQTGC-HLVVLAGNHDSVATLNESRDIMAFLNTTVVA----SAGHAPQILPR 117 Y F+ + ++ C H+VV+AGNHDS L+ +++ LN V+ +L Sbjct: 76 YYEFLGVVSKSHCDHVVVVAGNHDSPTFLDAPANVLKALNVHVIGTACEDVADEVLVLTD 135 Query: 118 RDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRG---- 173 ++ +P+LR RD+ ++QAG +G +K +LLA I ++Y + A + Sbjct: 136 SQDQAQCIIAAVPYLRDRDVRSAQAGESGADKDANLLAGIHEHYAKVAQVAKAKQAKLIT 195 Query: 174 --DQPLPIIATGHLTTVGA--SKSDAVRDIYIGTLDAFPAQNFPP-ADYIALGHIHRAQI 228 + +P+IATGHL G + D VR++Y+G+L A F DY+ALGH+H Q Sbjct: 196 QQQRHIPLIATGHLFAAGGATTADDGVRELYVGSLGKISADMFDECFDYVALGHLHVPQK 255 Query: 229 IGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNG 263 +GG EH+RY GSPI + F E ++K V LV F Sbjct: 256 VGGREHIRYSGSPIAMGFGEANQTKQVLLVQFGQN 290 Score = 77.9 bits (190), Expect = 6e-13, Method: Composition-based stats. Identities = 33/139 (23%), Positives = 66/139 (47%), Gaps = 3/139 (2%) Query: 260 FSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHD 319 + + + VP Q + + GD+ I L+Q + P+W+++ T DE + D Sbjct: 398 ITADNTMQIIAVTVPCFQQLLPISGDINHILQSLQQL---AHTKPIWIEVAYTGDEIVSD 454 Query: 320 IQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQ 379 ++ +I A P EVL ++ + + + + A ETL +L +VF R L ++ ESQ Sbjct: 455 LREQIHAAVAGTPFEVLKIKNHQVRNKVLKAQSTHETLQDLDEMQVFERCLVANKVAESQ 514 Query: 380 QQRLQHLFTTTLHTLAGEH 398 + L+ + ++ + + Sbjct: 515 RPSLREAYAQIVYQIHHDD 533 >UniRef50_B4U9G5 Nuclease SbcCD, D subunit n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U9G5_HYDS0 Length = 380 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 71/403 (17%), Positives = 155/403 (38%), Gaps = 28/403 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 ++ LH D H G+ +S+SR + + + +++ + VD I++AGD+FD +P + A Sbjct: 2 IKFLHIGDIHAGKTLHSRSRNDDAEYAISQVIDFVKKEPVDFILMAGDIFDQYTPDAEAT 61 Query: 61 TLYNRFV-VNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 + F+ L +V++ GNHD + + + + N + I+ +D Sbjct: 62 KIIFDFMVSELNALKIPVVMITGNHDGHSFFEGYKTLAKYANMHLFVKPSTKDYIITIKD 121 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 + +P++ + + + E + +++ +A + + Sbjct: 122 TN----IICVPYVFTKILDKTWEDNAASEYAHKV---------ENFINALISKAPRNTFN 168 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQ---NFPPADYIALGHIHRAQIIGGMEHVR 236 I H+ A + + R+ IG A N DY+ALGH+H+ Q I Sbjct: 169 ILLSHMMVKSAKPTKSEREASIGEYYAINLDNINNLKNLDYVALGHVHKYQKIPTTTDTY 228 Query: 237 YCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQW 296 Y GS + F+E G+ KY + V VE + + + + LK + S+ Sbjct: 229 YTGSCFQIDFNEEGQEKYFNFVILEQQSTNKVEKIKLDIKNQLKTLKVNAKSLN------ 282 Query: 297 RDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRET 356 + ++ + I + + +E + ++L +RR+ ++ + + Sbjct: 283 IKDIENVKGYVRVIIDDTIENTRLLES-KLTSEHIAGKILEIRRNVFEKPDIEVDLNKIR 341 Query: 357 LSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHE 399 + + F + E + L+ F + + + Sbjct: 342 NNLVD----FYEEYYKAKYREDLPEDLKKAFVELQYKVEHTED 380 >UniRef50_Q1J058 Nuclease SbcCD, D subunit n=3 Tax=Deinococcus RepID=Q1J058_DEIGD Length = 395 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 96/408 (23%), Positives = 167/408 (40%), Gaps = 26/408 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR+LHT+D+H G+N R E L + A++ + D ++V+GD+FDT +P + A Sbjct: 1 MRVLHTADFHAGRNLRGFDRTPEIHEALVEIAGLARSEKADVVLVSGDLFDTVNPSAEAE 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP---QILPR 117 F + L+ V +AGNHDS A L+ ++ ++ +VA P Sbjct: 61 AAVFDFFLRLRDANIPAVAIAGNHDSAARLHSLAGLLGWVGVQLVAQPTANPLDMIRTVE 120 Query: 118 RDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGD--- 174 + +PFL R ++ + + G + A Y++ + + Sbjct: 121 TRQGERLTVGALPFLSERRLVKAADLMGGE------VGAWRQKYREGMGFFLRKLAEGFR 174 Query: 175 QPLPIIATGHLTTVGASKSDAVRDIYIGTLDAF---PAQNFPPADYIALGHIHRAQIIGG 231 + H T GA S + R + ++A+ P Q A Y+ALGH+H+ Q Sbjct: 175 GDSVNMLMLHATMDGAVPSGSERTMQFDLMNAYTLSPLQLPAGAQYVALGHVHKPQPASE 234 Query: 232 MEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITA 291 M Y GS I L F E G+ K V+LV G+ + + + + + +K +L + + Sbjct: 235 MPLAHYPGSIIQLDFGEGGEKKQVNLVEVEAGRPARIIPVPLSSGRELRTVKVNLDQVES 294 Query: 292 QLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLAS 351 +L + V + ++ + L ++ ++ V Q + VL Sbjct: 295 RLAALTNFPG--LVKVVVQAPSGTALPGLKDRVLRQVPGALA----VELDALQDDLVLPE 348 Query: 352 QQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHE 399 +RE LS + E F + E D+ L+ F GE E Sbjct: 349 LRREGLSLAELYERFWQERRGELPDD-----LRAAFREADEAARGEAE 391 >UniRef50_O68033 Nuclease sbcCD subunit D n=1 Tax=Rhodobacter capsulatus RepID=SBCD_RHOCA Length = 405 Score = 234 bits (596), Expect = 6e-60, Method: Composition-based stats. Identities = 127/413 (30%), Positives = 186/413 (45%), Gaps = 27/413 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHT+DWH+GQ SREAEH+AFL L E QVDA++VAGDVFD +P A+ Sbjct: 1 MRILHTADWHIGQTLNGWSREAEHRAFLADLGEILLAEQVDALLVAGDVFDGLNPSGEAQ 60 Query: 61 TLYNRFVVNL--QQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP------ 112 L + +V+ +GNHD L ++ L V+ + P Sbjct: 61 RLLYAALAGYVRANPRLQIVLTSGNHDPAQRLEAPEAVLRELGVHVLGTLSRGPGGMDLD 120 Query: 113 ---QILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADAC 169 L R G A + +PFLR D+ + G + + AA+ + A A Sbjct: 121 RHLIPLRDRAGQIRAQVLALPFLRQADLPGLRLGAEEG-TEGAVTAALRALLAETVARAA 179 Query: 170 KLRGDQPLPIIATGHLTTVGASKS-DAVRDIYIGTLDAFPAQNFPPA-DYIALGHIHRAQ 227 + G LP+IA HLT G +S A R I IG A P FPPA ++ALGH+HR Q Sbjct: 180 AIAG--TLPLIAMAHLTCAGGLESAGAERRILIGGDHAVPPDVFPPALAHVALGHLHRPQ 237 Query: 228 IIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLK---- 283 + G VRY G+P PLS E G V L+ + G ++ +P PM L Sbjct: 238 SLDG-GRVRYSGAPFPLSASEIGYDHGVTLLDLAGGAAP--RHIPLPRPVPMLRLPAQGT 294 Query: 284 GDLASITAQLEQ--WRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRS 341 L I A L++ D + +L + + D + +I + A E+LP+ + + + Sbjct: 295 APLPEILAALDRLALPDRPRAEGPFLYLALRADRPVTEITAALDAALEALPLRLAGLTIT 354 Query: 342 REQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTL 394 R + R A+ + L+ + E +F E + + L F L + Sbjct: 355 RPETARPAAAP-PQDLTRTTPEALFAAAFRDLHGTEPETRHL-SAFRDALSEV 405 >UniRef50_C3WDH5 Nuclease SbcCD n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WDH5_FUSMR Length = 407 Score = 231 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 93/421 (22%), Positives = 161/421 (38%), Gaps = 36/421 (8%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLG+ R E + F+D L + I++AGD+FDT SP S A Sbjct: 1 MKILHTSDWHLGKKLEGAKRIEEQKLFIDTLEKIVTDENPKLILIAGDIFDTPSPSSEAE 60 Query: 61 TLYNRFVVNLQQTGCH-LVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQI----- 114 L+ + + G +V++ GNHDS L S+++ + + +I Sbjct: 61 KLFFDAMKKISNFGKRAIVIIPGNHDSAERLVASKNLAKDFGIIIYENPLEVKEIGEYGQ 120 Query: 115 ----------LPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAI------T 158 L L +P++ + + +EK++ L +I + Sbjct: 121 FQVERATEGGLILNIEGERVFLYSLPYVSEAYLDEMYKNV-LVEKEEELGESIDGDLTYS 179 Query: 159 DYYQQHYADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYI 218 + + +P I HL +G+ R+ +G + P DYI Sbjct: 180 EKIGALLKRGVVEVESENIPKIIMAHLFIMGSVGDGDEREAELGGSKGVDLDDLPEVDYI 239 Query: 219 ALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQP 278 ALGHIH+ + Y GSPI E K + L ++ + + +P Sbjct: 240 ALGHIHKPMKYS-RKRACYSGSPIEYRVTENRYKKKIFLADVKGDLDTEIKEIELENYKP 298 Query: 279 MAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLV 338 + K ++ I LE W+ ++I TD YL +I+ L ++ + + V Sbjct: 299 IK--KYEVKGIDKALE-LSQSLVGVQEWIYLKIVTDRYL--ASSEIRELRKNKNIVEIDV 353 Query: 339 RRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEH 398 + E + + EL ++E F + + + LF + GE Sbjct: 354 KYVDENEGENITYYEN---GELDIKESFKEYYKKFD-GIEPSEEMVELFMRL---VEGEE 406 Query: 399 E 399 + Sbjct: 407 Q 407 >UniRef50_B3JFY8 Putative uncharacterized protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JFY8_9BACE Length = 418 Score = 230 bits (587), Expect = 7e-59, Method: Composition-based stats. Identities = 97/413 (23%), Positives = 166/413 (40%), Gaps = 38/413 (9%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 ++IL TSDWHLG F+ R+ EH FL WLL DA++V+GD+FD+ +P + ++ Sbjct: 2 IKILATSDWHLGNTFHGFDRQEEHADFLRWLLGAVGQKNPDALLVSGDIFDSSNPSAASQ 61 Query: 61 TLYNRFVVNLQQ--TGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRR 118 LY F+ L Q +++AGNHDS A L R ++ V + Sbjct: 62 ELYYSFLDTLTQRFPQLQTIIIAGNHDSAARLEAPRLMLERHRVYVRGLIRGQEEGNFLP 121 Query: 119 DG-----------TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYAD 167 D A + +P+LR D + G + ++ ++ Sbjct: 122 DDLLLPVCSAAHPEERAWVLAVPYLRDGDFTRGMSYGEG----------VGEFLRRAVEA 171 Query: 168 ACKLRGDQPLPIIATGHLTTVGAS-KSDAVRDIYIGTLDAFPAQNFPP-ADYIALGHIHR 225 A R +I HL G+ ++ I IG + LGH+HR Sbjct: 172 ANLRRDRSREALILMAHLYATGSEVAENSSERIVIGGSEMVSLDEIDESVTLALLGHLHR 231 Query: 226 AQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESV-ENLNVPVTQPMAVLKG 284 Q + G E+ Y GS +P+SF E G +G+L V E L+ P+ P+ + Sbjct: 232 NQKVSGRENWLYPGSALPMSFAEKGYCHGAVYYEIEDGRLNGVSEFLDYPLQHPLVSVPA 291 Query: 285 DLASITAQLEQWRDVS-------QEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLL 337 + L+ R + +EP +L++ + D + I ++++ + +S V + Sbjct: 292 KPLPLAEVLDLLRALPDKDKMSEEEPVPYLEVNVLLDAPVAGINKQVEDVLQSKNVRLCR 351 Query: 338 V----RRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHL 386 R + + + + + L L EV R+ + + L L Sbjct: 352 TVIAYRVQQSAGDGEVVLESVDDLLTLDPIEV-IRKSYQNKFRCEMRDELVEL 403 >UniRef50_C6VTU7 Nuclease SbcCD, D subunit n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VTU7_DYAFD Length = 406 Score = 230 bits (586), Expect = 7e-59, Method: Composition-based stats. Identities = 94/411 (22%), Positives = 157/411 (38%), Gaps = 30/411 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHT+DWH+G+ + SR E + LD + E A+ VDAI++AGD+FD +P S A Sbjct: 1 MKILHTADWHIGKKLDNFSRLEEQRLVLDEICEIAEHEAVDAIVIAGDLFDNFNPSSEAT 60 Query: 61 TLYNRFVVNLQQTGCH-LVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQIL---- 115 L + L G ++ +AGNHDS + + V + Sbjct: 61 ELLYSTLHRLSANGTRAVIAIAGNHDSPERIQVPDALAKVCGILFVGFPNTEIRPFCTQG 120 Query: 116 ---PRRDGTPGAVL----CPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADA 168 + + P ++ L + A+ + QQH+ Sbjct: 121 QVDIIKTAPGFLEIKLPNAAFPLRVLHTPYANEQRLKTFLGVEESEEALRIHLQQHWQQL 180 Query: 169 CKLRGDQPLPIIATGHLTTV-----GASKSDAVRDI-YIGTLDAFPAQNFPP-ADYIALG 221 D + HL + + D R I +IG A +NFP YIALG Sbjct: 181 ADEHLDNNGFNLLATHLFVMQKGGEMPEEPDDERPILHIGGAQAIYTENFPKQVHYIALG 240 Query: 222 HIHRAQIIGGME-HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMA 280 H+HR + + Y SP+ SF E ++KYV L+ GKL + + + + Sbjct: 241 HLHRFHQVDKVPAPAVYSSSPLAYSFSEANQNKYVILIEAEAGKLVGYTPIELLKGKKLR 300 Query: 281 VLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRR 340 + SI +E + +++ I +D YL +K S ++++ + Sbjct: 301 --RKSFHSIDEAIEWL---GEHSEDLIELTIISDNYLEASDKKRLMEAHSGIIQIIPQIK 355 Query: 341 SREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTL 391 E + LS+E++F + + L +F L Sbjct: 356 KSEVADTSSEVDLS-----LSMEKLFQEYFKSKNKGQEPSNGLMEVFREVL 401 >UniRef50_B7KZ12 Nuclease SbcCD, D subunit n=8 Tax=Alphaproteobacteria RepID=B7KZ12_METC4 Length = 415 Score = 230 bits (586), Expect = 8e-59, Method: Composition-based stats. Identities = 116/418 (27%), Positives = 180/418 (43%), Gaps = 30/418 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 +R+LHT DWH+GQ SRE EH A L +VDA++VAGDVFD+ +P ++ Sbjct: 2 IRVLHTGDWHIGQTLRGFSREREHDAVFGCLESIVVEREVDALVVAGDVFDSQNPSGESQ 61 Query: 61 TLYNRFVVNL--QQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVAS---------AG 109 + + L + +V+ AGNHD+ L R ++ + VV + Sbjct: 62 ARFYTLMARLHVARPAMTIVITAGNHDAAGRLEAPRPLLEAIGVHVVGNVRRRDGAIDLD 121 Query: 110 HAPQILPRRDGTPGAVLCPIPFLRPRDIITSQA--GLNGIEKQQHLLAAITDYYQQHYAD 167 + +G A + + + + + I + ++ A+ D Y Q + Sbjct: 122 RHLVPVRSANGEVAAQVLAVSYPTAACLPPLSSLGQPPRIGETSPIVRAVRDLYGQLFEA 181 Query: 168 ACKLRGDQPLPIIATGHLTTVGASKSDA-VRDIYIGTLDAFPAQNFP-PADYIALGHIHR 225 A LP++ TGHL G +S+ R I +G A P+ FP A Y+ALGH+HR Sbjct: 182 ARPRLA--GLPLLVTGHLHVAGGLESEGAERRILVGGEHAVPSDVFPEEARYVALGHLHR 239 Query: 226 AQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLK-- 283 AQ++ G VRYCGS IPLS E V LVT G +E++ +P P L Sbjct: 240 AQVL-GRGQVRYCGSLIPLSAAEQPYRHGVTLVTLGAGA-AEIEHIEIPRPVPFLRLPAS 297 Query: 284 -----GDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLV 338 DL L D+ E ++ + + + L + ++ + ES PV V+ V Sbjct: 298 GDMPLADLGDHLNALALDPDLPMEARPYIQVRLAREGLLPGYRAEVDRIAESFPVRVVDV 357 Query: 339 RRSREQRERVLASQQRE---TLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHT 393 R + QR + + LSE EE+F + DE + +F Sbjct: 358 RVTVPQRTAIAIEESEAPPPRLSERDPEELFRLAFRAK-WDEDPEPAHLDVFHRARAE 414 >UniRef50_C9RQA4 Nuclease SbcCD, D subunit n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RQA4_FIBSS Length = 438 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 119/438 (27%), Positives = 192/438 (43%), Gaps = 41/438 (9%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ +HT+DWHLG + R E AFL WL + A+I+AGD+FD +P + A+ Sbjct: 1 MKFIHTADWHLGNMMHDIDRTEEAAAFLKWLKGEIERVGAQALIIAGDIFDIVNPSNVAK 60 Query: 61 TLYNRFVVNLQQTGCH-LVVLAGNHDSVATLNESRDIMAFLNTTVVASAGH---APQILP 116 T Y +F+ +L +T C +VV+ GNHDS A L+ ++ LN VV S ++ Sbjct: 61 TQYYKFLASLLKTNCTNVVVVGGNHDSGALLDAPAGVLEALNIKVVGSINGRKVEDLVVE 120 Query: 117 RRDGTPGA--VLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYAD----ACK 170 +DG + C +PF+R ++ + + D ++ Y D A + Sbjct: 121 LKDGDENVIGICCAVPFMRNLELEQFYKTDERESGEGADDVSDEDLLKRLYGDVYRYAVE 180 Query: 171 LRGDQPLPIIATGHLTTVGASK---------------------SDAVRDIYIGTLDAFPA 209 LRG++ +PIIATGHL S D VR++ IGTL Sbjct: 181 LRGERNIPIIATGHLYASNLSGRNSDELGSGANENATISENSVEDGVREV-IGTLGNVDV 239 Query: 210 QNFP-PADYIALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESV 268 FP DY+ALGHIH A ++ VRY GSP + FDE + V V ++ V Sbjct: 240 STFPSELDYVALGHIHYASMVAKNPKVRYSGSPFAMGFDESNCKRVVLTVDVKPNEVPVV 299 Query: 269 ENLNVPVTQPMAVLKGDLASITAQLEQWRDV--SQEPPVWLDIEITTDEYLHDIQRKIQA 326 E VP KGDL ++ L + ++D+ +TT +++ + + ++A Sbjct: 300 EKEEVPKAMRFEQFKGDLETLKRCLRNLEKELVANPMETYVDLLLTTGDFV-SLNQALEA 358 Query: 327 LTESLPVEVLLVRRSREQRERVLASQQR-ETLSELSVEEVFNRRLALEELDESQQQRLQH 385 V R SR E+ + + E+ F +A ++ + +++ Sbjct: 359 EEAGKHFVVKRHRISRGVLRGANRFDDNVESTKQYTQEDYFRMLIATNAEEKEDSEVVKN 418 Query: 386 LFTTTL----HTLAGEHE 399 L+ + + HE Sbjct: 419 LYDKFIGMFNEAVCKAHE 436 >UniRef50_C1XNQ0 Exodeoxyribonuclease I subunit D n=2 Tax=Meiothermus RepID=C1XNQ0_MEIRU Length = 387 Score = 226 bits (577), Expect = 9e-58, Method: Composition-based stats. Identities = 87/398 (21%), Positives = 141/398 (35%), Gaps = 20/398 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MRILHT+DWHLG+ + R E + L LL ++ +++ ++VAGD+FD + A Sbjct: 1 MRILHTADWHLGKVLKGRERTPEIRQALQALLGLVRSERIELVLVAGDLFDRSVVSTEAE 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 F V L++ +V+AGNHDS L +++ TV + A Q Sbjct: 61 AAAFEFFVGLRELQVPALVIAGNHDSRERLEALSPLLSLTGATVFGNLRFAEQGGVVE-- 118 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 GA + +PFL R ++ + L G + G + Sbjct: 119 ALGARVALLPFLSERRLVKAGDLLQGD--GAEWKKTYGQGMGLILKNL--ATGFSGDLNL 174 Query: 181 ATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPP-ADYIALGHIHRAQIIGGMEHVRYCG 239 HLT G + A +FP Y+ALGH+HR Q + Y G Sbjct: 175 LMAHLTVEGGQLGGGEFTFHTTNTYAIQPGDFPQTLSYVALGHLHRQQQVCEAPLAWYAG 234 Query: 240 SPIPLSFDE-CGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRD 298 S I L F E + +V + G V + +P+ + ++ + E+ R Sbjct: 235 SLIQLDFGEGENSDRGALIVEVAPGLPARVHPIRERWGKPLKTFRLSRETLDRRWEEVRT 294 Query: 299 VSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLS 358 + I I + L + LP + + + E + E L Sbjct: 295 FPG----YSKIVIEGPGNA----ALRERLFKELPDLLEVEFHTPEAEIKGPTPVDTENLD 346 Query: 359 ELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAG 396 + + R +E L F Sbjct: 347 WVEAYAEYRRTTTAKEASPE----LLEAFKQVYEEAHT 380 >UniRef50_Q5SIS5 Exonuclease SbcD n=3 Tax=Thermus RepID=Q5SIS5_THET8 Length = 372 Score = 226 bits (577), Expect = 9e-58, Method: Composition-based stats. Identities = 90/399 (22%), Positives = 146/399 (36%), Gaps = 33/399 (8%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR+LHT+DWHLG+ R E A L LL ++ +VD ++V+GD+FD + A Sbjct: 1 MRLLHTADWHLGKLLKGVDRTPEIAAALRDLLGLVRSERVDLVVVSGDLFDRPQVSAEAE 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG 120 F + L+ G +V+AGNHD L ++ V A + G Sbjct: 61 ACAVEFFMELKALGVPALVIAGNHDPKERLEALAPLLGLAGARVRGRLLFAEEGGVVEVG 120 Query: 121 TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII 180 A L +PF+ R ++ + + + YA+A + D + Sbjct: 121 GVRAGL--LPFVSERLLVRRLFQED-------------EVLHRTYAEALRRVLDNLKSPL 165 Query: 181 ATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFP-PADYIALGHIHRAQIIGGMEHVRYCG 239 GH GA ++ A P + P Y+ALGH+HR Q + Y G Sbjct: 166 LLGHFAVEGARPGGGEFVFHLVGSYAVPRASLPLEVRYLALGHVHRQQQVSEAPVAWYPG 225 Query: 240 SPIPLSFDE-CGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRD 298 S + L F E G + LV V + +P+ + + ++ + Sbjct: 226 SLVQLDFGEGEGAERGALLVELPPSGPPRVHPIPGRWGKPLRTYRLRPEELDGRMGELER 285 Query: 299 VSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLS 358 +L + + + +AL L VE ++ +RE + Sbjct: 286 FPG----YLRLVVEGRLSPQVKENLFRALPHLLAVEGAPLQAGEGRREE---------VQ 332 Query: 359 ELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGE 397 +L E + R L E L F L + GE Sbjct: 333 DLGFVEGYARYLEERGRKEE---ALLERFAEVLAEVEGE 368 >UniRef50_D0LY15 Nuclease SbcCD, D subunit n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LY15_HALO1 Length = 467 Score = 226 bits (577), Expect = 9e-58, Method: Composition-based stats. Identities = 126/451 (27%), Positives = 189/451 (41%), Gaps = 59/451 (13%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR+LHTSDWHLG + + SR+ EH+ FL WL++T + VDA+++ GD+FD+ +PP+ A+ Sbjct: 1 MRLLHTSDWHLGHSLHDVSRDYEHECFLRWLVDTLEAEAVDALLITGDIFDSANPPATAQ 60 Query: 61 TLYNRFVVNLQQ--TGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP------ 112 + +F+ + G ++V+ GNHDS A L + +++ L T V+ + P Sbjct: 61 ASWYQFLAEVHARLPGLDVLVIGGNHDSAARLEAPKPVLSALRTHVIGALRRGPRDQHGR 120 Query: 113 ---------QILPRRDGTPGAVLCPIPFLRPRDIITS----------------------- 140 L RDG A++ +PFLR D+ Sbjct: 121 RPLELERAIVPLRDRDGEVAAIVAAVPFLRTADLPRPRRASADATVASEVTDASDGPADS 180 Query: 141 ---QAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPIIATGHLTTVGASKSD-AV 196 A E ++ L DA + R ++ATGH VG S + Sbjct: 181 GASDADAGDEELRRDPLIGGVRQVYAEVLDAARARLQPGQALLATGHCYMVGTDISTLSE 240 Query: 197 RDIYIGTLDAFPAQNFP-PADYIALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYV 255 R I G A P FP Y ALGH+H+AQ +GG E VRY GSPIPL+ DE V Sbjct: 241 RRILGGNQHALPVSIFPDDVAYAALGHLHKAQRVGGREGVRYAGSPIPLALDEARYRHQV 300 Query: 256 HLVTFSNGKLESVENLNVPVTQPMAVLK----GDLASITAQLEQWRDVSQEPPV------ 305 LV L V +L+VP T + + + A +E + Sbjct: 301 LLVELEGPALAEVRSLSVPRTVDIVRIPKSGAASPKEVFAAIEALPAWTPGEGDPQKSDT 360 Query: 306 --WLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQ-QRETLSELSV 362 +L++ + D+ ++ +++ + + R LA L EL Sbjct: 361 RPFLELSVAIDKPRAQLKGEVEDKLRGKWPRLAKLGVVRRGDGAPLADALPTRELRELDP 420 Query: 363 EEVFNRRLALEELDESQQQRLQHLFTTTLHT 393 EEVF RR A + LQ F L Sbjct: 421 EEVFLRRYARDHAGAPDDDLLQS-FHRVLED 450 >UniRef50_Q1NCL0 Nuclease SbcCD, D subunit n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NCL0_9SPHN Length = 410 Score = 226 bits (577), Expect = 9e-58, Method: Composition-based stats. Identities = 107/419 (25%), Positives = 174/419 (41%), Gaps = 40/419 (9%) Query: 2 RILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYART 61 R++H+SDWH+G +S REAEH+AFL WLL+ + D ++V GD++D +PP A Sbjct: 9 RLIHSSDWHIGHELFSHEREAEHEAFLSWLLDRLVAEEADLLLVTGDIYDVANPPVSAMA 68 Query: 62 LYNRFVVNLQQ--TGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA-------- 111 F+ + +V++ GNHDS A +N ++ ++ S Sbjct: 69 RLYAFLRDATTRCPNLQIVIIGGNHDSAARINLPAALLGPGRIHLIGSLPRVNGIPDFER 128 Query: 112 -PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACK 170 L R GT A L +P+ RP D+ + + + Y+ + Sbjct: 129 MLVPLKDRAGTIVAWLAAVPYCRPGDMGS---------------GGLPELYENVLTAGAE 173 Query: 171 LRGDQPLPIIATGHLTT-VGASKSDAVRDIYIGTLDAFPAQNFPP-ADYIALGHIHRAQI 228 LP+I TGHL G + R I +G +A F A YIALGH+HR Q Sbjct: 174 RAN--GLPLIVTGHLHVAEGDVSEHSERRITVGGEEAQATSLFDDRAAYIALGHLHRPQT 231 Query: 229 IGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLK----- 283 I G +RY GSP PLS E + +V G + E +P P + Sbjct: 232 IKGDTLIRYAGSPFPLSATERLYRHSISIVDLLGGGAAAREE-EIPRVVPFLTVPAEGPK 290 Query: 284 --GDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRS 341 G++ +L+ ++ + ++++ + D ++Q ++ A + P+ + + R Sbjct: 291 PIGEVELAIQELDFDPELPRGLHPFVEVSVLVDGPEPNLQARVMAALDGKPLRLTRIARV 350 Query: 342 REQRERVLASQQRE-TLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHE 399 + + +RE L+EL E VF E + L F L E Sbjct: 351 SAREATNQSIAEREVDLAELLPEAVFAELFERAHGSEPPED-LSQAFQALLIETQMSRE 408 >UniRef50_C0EV38 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EV38_9FIRM Length = 399 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 100/406 (24%), Positives = 177/406 (43%), Gaps = 25/406 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+++HT+DWHLG+N SR E + FL + + Q D II+AGD++D +P + A Sbjct: 1 MKLIHTADWHLGKNIEGHSRLEEQRLFLKDFINICEEEQADIIIIAGDIYDNYNPSAMAE 60 Query: 61 TLYNRFVVNLQQTG-CHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQI----- 114 L+ + L + G C VV+AGNHD+ L S + + + Sbjct: 61 QLFYDTLKQLSRNGDCMTVVIAGNHDNPERLVASGPLARDHGIVMAGTPNSVITPGMYGK 120 Query: 115 --LPRRDG--------TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQH 164 + D A + +PF P + ++ L+ E++ A+ ++ Sbjct: 121 NEITESDAGYIHAIIHGEEADILLVPF--PSEKRLNEVYLDETEEETKKAASYSEKMSSL 178 Query: 165 YADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFP-PADYIALGHI 223 + + + +IA HL + + + + R I +G + FP ADYIALGH+ Sbjct: 179 FGSLATHFHEDSIHLIA-SHLFVMNSVEDGSERSIQLGGSYMVGGEIFPENADYIALGHV 237 Query: 224 HRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLK 283 H+ Q + G RY GSP+P + E K V VT + G ++ L +PV +P+ V Sbjct: 238 HKPQKVPGCPKARYSGSPLPFNVRETSFDKQVIAVTLTAGSPCTIRELPLPVYKPIEV-- 295 Query: 284 GDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSRE 343 +I +EQ + + + W+ +E+ TD Y+H+ K ++ + + V E Sbjct: 296 WHCENIDDAVEQC-EANADRECWVYLEVKTDHYIHEEDIKKMKAIKADILSITPVLPEDE 354 Query: 344 QRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTT 389 + + + + EL + F R+ ++ E L + Sbjct: 355 SEDFSASDLKEQPFDEL--VKNFYRKKFHVDIGEETFSLLMSIIEE 398 >UniRef50_B5HB15 Nuclease SbcCD n=1 Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5HB15_STRPR Length = 412 Score = 226 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 98/405 (24%), Positives = 148/405 (36%), Gaps = 24/405 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR+LHTSDWHLG F+ +RE + A L ++ AQ Q D I+ +GD+F P A Sbjct: 1 MRLLHTSDWHLGHIFHGHAREEDFDAVLAEIVAIAQESQPDLIVHSGDLFHHSRPTIRAM 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLN-------TTVVASAGHAPQ 113 + ++ L VVLAGNHDS A + L + Sbjct: 61 SRAMDTLIELAAI-APTVVLAGNHDSPAYFKFFGSMNGPLRGRGLFFADRFRPADDGGVL 119 Query: 114 ILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRG 173 G L +PF+ P A + + + + Sbjct: 120 TFDACGGEQQIRLAVLPFVHPNHFWQHSATGTSYADYAEGMRGLQAQLMRAMHEGYDPDR 179 Query: 174 DQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG-M 232 D ++ H+ GA S R + +N P Y ALGHIHR Q + G Sbjct: 180 D---ILLFAAHVYVTGAQGSRGGR--AVDDRFETGPENLPEVSYAALGHIHRPQPVRGAK 234 Query: 233 EHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQ 292 RY GSP+ + F E +SK V +V G+ + + +A G L + A Sbjct: 235 CIARYAGSPLAMDFGEADESKSVVIVDADPGRPVRALPRRLSSGRRLAHFPGTLEELKAA 294 Query: 293 LEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQ 352 +Q +L I +E + +KI + + +LV + A Sbjct: 295 ------AAQYDGTFLKAVIAGEEPDGLLSQKIAEIVPNA----ILVNPVPAREAAAEAVM 344 Query: 353 QRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGE 397 + E + + F LA E L + + FT L+ L E Sbjct: 345 DGDPGEEPELPDAFRAYLASEGLSGAAAESTVTAFTHLLNELDDE 389 >UniRef50_Q3ZXH4 Nuclease SbcD n=5 Tax=Dehalococcoides RepID=Q3ZXH4_DEHSC Length = 415 Score = 225 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 82/422 (19%), Positives = 147/422 (34%), Gaps = 34/422 (8%) Query: 1 MRILHTSDWHLGQNFYSK--------SREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDT 52 M+ILH +D H+G Y + SR A+ D L+ A +VD ++ +GD + + Sbjct: 1 MKILHFADLHIGVENYGRFDSATGLSSRLADFLTAFDRLVAYAIDKKVDLVVFSGDAYKS 60 Query: 53 GSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLN-----ESRDIMAFLNTTVVAS 107 P + + R V L +G + +L GNHD E D + N V Sbjct: 61 RDPSQTQQREFARRVSTLASSGIQVFLLVGNHDQPNAAGRATTTEIFDTLDIANVHVSGK 120 Query: 108 AGHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYAD 167 A ++ + +P+LR +++ L + Y + Sbjct: 121 A----EVHLINTRNGPIQIASLPWLRRSSVLSVSNQKEEKNLSIEELNQRVESYLAGIIE 176 Query: 168 ACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNF--PPADYIALGHIHR 225 + D+ +P I + HL+ A + R+I IG N P DY+ALGHIH+ Sbjct: 177 NLAGQLDKNIPSILSAHLSVNTAKV-GSERNISIGYEPTVMLSNIANPAFDYVALGHIHK 235 Query: 226 AQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSN-GKLESVENLNVPVTQPMAVLKG 284 Q++ V Y GS L F E K +LV E + + + ++ Sbjct: 236 QQVLSSAPPVIYPGSLERLDFGEEKDDKGFYLVEIDPLSHKTDFEFIKLE-GRRFLTIEL 294 Query: 285 -----DLASITAQLEQWRDVSQE-PPVWLDIEITTDEYLHDIQR--KIQALTESLPVEVL 336 L + + Q+ + +++ + R I+ + Sbjct: 295 NLNADSLDPTLEVINILQARQQDIKDAIVRLKLELPAEIGGQLRDSDIREALREAHNFTI 354 Query: 337 LVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAG 396 R R+R + L + L +++ +++ L TL Sbjct: 355 SKNVIRLTRQRADGF----KVEGLDPIQALEHYLEIKQTSAQEKKTLLEYGRRLYSTLDN 410 Query: 397 EH 398 + Sbjct: 411 KQ 412 >UniRef50_C7RGF6 Nuclease SbcCD, D subunit n=4 Tax=Anaerococcus RepID=C7RGF6_ANAPD Length = 371 Score = 223 bits (569), Expect = 7e-57, Method: Composition-based stats. Identities = 88/397 (22%), Positives = 154/397 (38%), Gaps = 40/397 (10%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR+LH SD HLG+N S E L +++ + VD +++AGD+FDT P + A Sbjct: 1 MRLLHLSDLHLGKNIGSYFLIEEQGFALAEIIKIIKEEDVDIVMIAGDIFDTIIPSAEAM 60 Query: 61 TLYNRFVVNLQ-QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 LY+ F+ + G ++ ++GNHDS L+ ++ N +V+ P + D Sbjct: 61 DLYSNFIEEIVFDLGKKVLAVSGNHDSSKRLDINKRFYRSNNYYLVSEYDKDP--ISFED 118 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 IPF+ T + TD Y+ D Sbjct: 119 DFGKVNFYLIPFISINKAKTIF---------DSSIDNFTDVYKYALEAI-----DYRDRN 164 Query: 180 IATGHLTTVGASKSDAV------RDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGME 233 + H S D + + IG DA A F DY+ALGH+HRA + Sbjct: 165 VLITHCYASNMSSFDKEVYDEGQKPLTIGGTDAMDASLFEGFDYVALGHLHRAHYVLD-P 223 Query: 234 HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQL 293 +RY G+ + SFDE +K V LV + + + +P + +G I + Sbjct: 224 KIRYSGTFMKYSFDEENLTKTVSLVDLKDK--AEIRKIEIPFLRDFVTKRGMFEEILKE- 280 Query: 294 EQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQ 353 ++ ++ + + +++ E P V + ++ ER + Sbjct: 281 -------EKSEDYIKFILEDSYIHENAMARLK---EKFPRAVSITYANKAVFEREDSYDV 330 Query: 354 RETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTT 390 + + ++ E+F + +DE +Q+ L Sbjct: 331 --DIDDKNLLELFAEFYHFK-MDEDLKQKDTQLIQRI 364 >UniRef50_B2S3L6 Possible exonuclease n=2 Tax=Treponema pallidum RepID=B2S3L6_TREPS Length = 391 Score = 223 bits (568), Expect = 8e-57, Method: Composition-based stats. Identities = 84/407 (20%), Positives = 150/407 (36%), Gaps = 31/407 (7%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHT+D HLG+ + S A + L L A+I+AGD++D P + + Sbjct: 1 MKILHTADLHLGKTLHEVSLFASQKKMLGDLCTLLAQDNYAALIIAGDIYDRCVPSAESV 60 Query: 61 TLYNRFVVNLQQ--TGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRR 118 +L++ F+ N+++ + ++ GNHDS L+ +++++ + + + Sbjct: 61 SLFSSFLQNIKRSMPRLPIYLIPGNHDSAQRLSFAQELLKQQGVFIAQDPEESTRPHLLC 120 Query: 119 DGTPGAVLCPIPFLRPRDIITSQAGLNG--IEKQQHLLAAITDYYQQHYADACKLRGDQP 176 L +PFL I Q LL + Q+ + Sbjct: 121 HEGETVQLFLLPFLHAGAFSYLDEENTTCLIHTQSELLQEASRRLQRAVSL--------D 172 Query: 177 LPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVR 236 P I HL T ++ R +G F Y+ALGH+H+ Q I E + Sbjct: 173 TPSILVAHLFTQKGISCESERPF-VGNAVYADPHWFDFFTYVALGHLHKCQKI--TERMY 229 Query: 237 YCGSPIPLSFDECGKSKYVHLVTF---SNGKLESVENLNVPVTQPMAVLKGDLASITAQL 293 Y GSP+P SFDE K V + G V L + P+ ++ ++ Sbjct: 230 YSGSPLPYSFDEANTQKVALSVEIHCNTKGFPIHVTPLPLEPLIPLRTIRDSFHALYTGD 289 Query: 294 EQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQ 353 +L+I +T +H+ I L P + + + + + Sbjct: 290 RYLL----YQRDFLEITLTDPALVHNP---IGLLKPRYPGLLSIKQENAFAFDIPPPYSS 342 Query: 354 RETLSE------LSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTL 394 E ++ + +VF ++ D + Q LF Sbjct: 343 NEGIAPCTHHSLRTHFDVFMHEVSPTPDDREKGALFQELFDEMQQEF 389 >UniRef50_C2KSA5 Possible exonuclease SbcD n=2 Tax=Mobiluncus mulieris RepID=C2KSA5_9ACTO Length = 422 Score = 223 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 89/432 (20%), Positives = 156/432 (36%), Gaps = 52/432 (12%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHTSDWHLG+ FY + FL +L + Q DA+++AGDV D +P Sbjct: 1 MKILHTSDWHLGREFYGYDLREYQEQFLAQMLGLLREFQPDALVIAGDVLDKKNPADVDV 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA--PQILPRR 118 + + F+ + CH+V+++GNHD + L D++ + +V+ P +P R Sbjct: 61 LMLSEFICAANEY-CHVVIISGNHDGASRLGFLSDVLHRVGVHIVSRGSQVGIPIEIPNR 119 Query: 119 DGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPL- 177 +G L PIP+L P + E H A + ++A + R Sbjct: 120 EGNLAGRLYPIPYLYPHQEREELSTWTDTEGNPHPDAWLEQNAAHSESEAPQQRLLPGKT 179 Query: 178 ----------------------PIIATGHLTTVG--ASKSDAVRDIYIGTLDAFPAQNFP 213 P+I H D V +G+L Sbjct: 180 GIINAAALRRIGNDILARGRTVPLIGIAHDNFTKNFTPPEDEVGKYTVGSLPNVDNTVLA 239 Query: 214 ----------PADYIALGHIHRAQII--GGMEHVRYCGSPIPLSFDECGKSKYVHLVTFS 261 DY ALGHIH+ + Y GSP+P + D+ KYV V + Sbjct: 240 TLGGVVSGNQGLDYFALGHIHKCYPVIKSSGFEAWYSGSPLPYATDDTN-DKYVLAVEIN 298 Query: 262 NGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQ 321 +VE + + + + ++ + + I +T + + Sbjct: 299 PAHEVTVEKIPLSMPYQVCEFNDSFENLLNLGN--PKYAGLHDAFCQITLTENYTPENAL 356 Query: 322 RKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQ 381 ++I+++ + R + A E +S L + F L + E Sbjct: 357 QRIKSIFPRM------TRLQTSSKTGGTAKWVTEAVSPLEFTKTF---LKNAQCSEEAIL 407 Query: 382 RLQHLFTTTLHT 393 ++ ++ + Sbjct: 408 LVETIYEELVKG 419 >UniRef50_D0LLB1 Nuclease SbcCD, D subunit n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LLB1_HALO1 Length = 423 Score = 223 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 93/406 (22%), Positives = 160/406 (39%), Gaps = 18/406 (4%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M++LH SDWHLG+ Y SR ++H A +D ++E A+ D ++ GD+FDT P Sbjct: 1 MKLLHVSDWHLGRTTYGASRASDHDAVIDQMVEEARALGPDLVLHTGDLFDTARPSYDDM 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP----QILP 116 + L +VV+ GNHDS A L ++ + AS P + Sbjct: 61 QRGVDALERLAAL-APVVVVRGNHDSAALLALFSRMLGARSRIHFASHPRRPKQGGVLDF 119 Query: 117 RRDGTPGAVLCPIPFLRPRDIITSQAGL-NGIEKQQHLLAAITDYYQQHYADACKLRGDQ 175 + +PF+ ++ + + I D A+ + D Sbjct: 120 DSADGHRVRVAVLPFVHAGRVVRGFEDATSWTGVYAKRIRGIVDVLDGALAEDFRPERD- 178 Query: 176 PLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGME-H 234 ++ HL GA+ S++ R I++ A A + P Y A GHIH+ Q + Sbjct: 179 --VLLFAAHLHVDGATLSNSERAIHVSDDYASRADHLPRVSYAAFGHIHKPQALPSSGVT 236 Query: 235 VRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLE 294 Y GSP+ L F E G+ K + VT + G+ V ++ + + + G L E Sbjct: 237 GAYAGSPLQLDFGEVGEQKRMVAVTAAPGRPAEVVSIPLTRGRELRAFTGTLE------E 290 Query: 295 QWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVR-RSREQRERVLASQQ 353 + + T E + K + L + ++ +RE + Sbjct: 291 LAAAADGLGDALCKLTLRTAEPDPSLASKARELLPRAEIVQVVEHCAAREMQALDDRDLA 350 Query: 354 RETLSELSVEEVFNRRLALEELD-ESQQQRLQHLFTTTLHTLAGEH 398 E S+EE+F+ L + + R++ +FT L +A + Sbjct: 351 AGDAREPSLEELFDEYLQRSKGTRSAPAARVREVFTAALSAIAADE 396 >UniRef50_UPI00016C0A35 exonuclease sbcD n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0A35 Length = 382 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 80/395 (20%), Positives = 157/395 (39%), Gaps = 22/395 (5%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+I HTSDWH+G+ + S + + L +E ++ + D II++GD++D+ +P A Sbjct: 1 MKIFHTSDWHIGKVIGNISMIEDQRHILMQFIELSKQEKPDVIIISGDIYDSPTPSISAI 60 Query: 61 TLYNRFVVNL-QQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 TL N + L Q + ++ G+HD+ T+ +++ N + + + + Sbjct: 61 TLLNEILTVLVMQMKIFIFIVPGDHDN--TIQLKLELLKQSNLYLATN--KLFERILFIK 116 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 GT +PF+ P I H + + Q+ K D Sbjct: 117 GTELYHFYLVPFIDPLLI---------QHTNTHSKISTPEQAMQYIISEIKKTIDSTSNN 167 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCG 239 I H + + S A + + +DA + F DY+ALGH+H+ +G E V Y G Sbjct: 168 ILITHNFVI--NYSKAKQFAAMPNIDAINYELFADFDYVALGHLHKRAFVGRKE-VCYSG 224 Query: 240 SPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQW-RD 298 S SF E + K ++ +T S K E L + + L +I + + Sbjct: 225 SIAKYSFAEENQIKGINKITIS-NKYVRNEYLPLLAPKDFQTFTDTLDNILQIGQDFYLK 283 Query: 299 VSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLS 358 ++ + +E L +++ + P + + + + + + E + Sbjct: 284 HGHYIQNYIHATLIDEEELLHPLDQLRTV---FPNIISIDKPLLKPAKTEPLTNNLEIQT 340 Query: 359 ELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHT 393 + F + + EL E +Q ++ + + Sbjct: 341 PSDLFLAFYIQCSKTELTEEKQICIKDIINNVIQG 375 >UniRef50_C2BSE2 Exonuclease SbcD n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BSE2_9ACTO Length = 413 Score = 221 bits (563), Expect = 4e-56, Method: Composition-based stats. Identities = 94/420 (22%), Positives = 165/420 (39%), Gaps = 37/420 (8%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ +HTSDWHLG++F + FL +L H+ DA++++GDV D +P Sbjct: 1 MKFIHTSDWHLGRDFMNYDLAPYQDDFLGQILAQIAAHRPDAVLISGDVLDKPNPGDADL 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA--PQILPRR 118 + F+ + ++++AGNHD + L ++ +V A +PR Sbjct: 61 DKLSDFLNQ-ARRMTRVILIAGNHDGASRLGFAKGFTLPE-VNIVTKAAQVGTAIEIPRP 118 Query: 119 DGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYY-------------QQHY 165 DG GA++ PIP+L P T + + +HL A+ + + Sbjct: 119 DGELGALVYPIPYLYPYQDRTELSTWVDTDGVRHLDDALDPPPSEDDPDPVFPGKPEALF 178 Query: 166 ADACK------LRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQN-----FPP 214 A A + R D +P++A H + + + ++ + Sbjct: 179 AAALRRIARDLHRRDTDVPVLAMAHDFLSPVREMEPLGNLSPIPVSLLDDLAGGLKGGRG 238 Query: 215 ADYIALGHIHRAQIIGGMEH-VRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNV 273 DY+ALGHIH+A + G Y GSP+P E K LV V+ L + Sbjct: 239 IDYLALGHIHQAFQLSGTNVAAWYAGSPLPYRVSEHNV-KGTLLVQIDPNHQVEVQRLAL 297 Query: 274 PVTQPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPV 333 + + L+G + +T + + + I +T + +++A+ P Sbjct: 298 ELPYEVKQLEGSIEDLTNPAD--PRYQRWHHAFCSINLTETILPPNAYNRLKAV---FPR 352 Query: 334 EVLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHT 393 + L R E + + + LSEL + F R ++ E L+ LF T Sbjct: 353 MLTLTHRQDSLPETLSSGTEFRELSELEIATEFLRTCGID--TEEDLALLRKLFENTFEG 410 >UniRef50_C9LH67 Exonuclease SbcCD, D subunit n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LH67_9BACT Length = 413 Score = 220 bits (560), Expect = 7e-56, Method: Composition-based stats. Identities = 96/425 (22%), Positives = 167/425 (39%), Gaps = 39/425 (9%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M++LHT+DWHLG FY REAE + +L WL +T Q D +++AGDVFD +P + A Sbjct: 1 MKLLHTADWHLGNAFYGYDREAEFKHYLAWLRQTLAEQQPDVLLIAGDVFDHPNPSAEAE 60 Query: 61 TLYNRFVVNLQQ--TGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ----- 113 ++ RF+ + +G +VV+AGNHDS A L ++ N V + P Sbjct: 61 KMFFRFLCTAAEEVSGLQIVVIAGNHDSGARLEAPAGLLYLHNIYVRGTIERLPDGTPDF 120 Query: 114 -----ILPRRDGTP-GAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYAD 167 L RRD V +P+LR D G+ Y++Q + Sbjct: 121 DRLILPLSRRDNNEAEIVCFAVPYLRSGDYPAGMTQEEGLHY----------YFEQLWKH 170 Query: 168 ACKLRGDQPLPIIATGHLTTVGASKSDAVR--DIYIGTLDAFPAQNF-PPADYIALGHIH 224 + + LP+I H A S+ + +G D A YIALGHIH Sbjct: 171 L-RKSDFRGLPVIPLAHYYAADARLSETEHSERLVVGGQDRVEGDVAGRDAAYIALGHIH 229 Query: 225 RAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLK- 283 RAQ + + Y GS +P+SF E L+ V L + + + Sbjct: 230 RAQEV--RKRTFYAGSILPMSFSEKYYDHGAQLIELDEEGRAGVSRLTYTPLRQLKSIPE 287 Query: 284 ---GDLASITAQLEQWRDVSQEPP----VWLDIEITTDEYLHDIQRKIQALTESLPVEVL 336 + + + ++ +L++ + ++ + ++ V Sbjct: 288 KGAASAGEVLELISRLPRREKDDEGLGWPYLELRVKEEQPEPQFLHDVTTALQTKAVRFC 347 Query: 337 LVRRSR-EQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLA 395 + R + E + ++ + E+ +++ ++ + + LQ F + Sbjct: 348 RILREQPEVTGTERSMPDVVNVTTTTPLEL-AQQVFQDKYGKPLPEALQTRFAEAAEDVI 406 Query: 396 GEHEA 400 + A Sbjct: 407 TDRHA 411 >UniRef50_A3HX94 DNA repair exonuclease n=2 Tax=Bacteroidetes RepID=A3HX94_9SPHI Length = 414 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 82/420 (19%), Positives = 158/420 (37%), Gaps = 38/420 (9%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 ++ILHT+DWHLG+ SR E + L+ ++E A VD +++AGD+FDT +P A Sbjct: 2 IKILHTADWHLGKRLQEFSRIEEQKLVLEEIIEVADQENVDLVLLAGDIFDTFNPNHEAV 61 Query: 61 TLYNRFVVNLQQTG-CHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 L + + L + G ++ ++GNHDS + + L + S + + + D Sbjct: 62 ELLYKTLRRLSKNGERPIIAISGNHDSTQFVEAPDPLARELGI-LFYSRYDSIIPIGKLD 120 Query: 120 GTPGAVLCPIPFLRPRDIITSQA------------GLNGIEKQQHLLAAITDYYQQHYAD 167 F+ + L + A + Q+++ + Sbjct: 121 SGIEITKSASGFVELKLPKIEFPVRIILAPYANENLLKTYLGEGDREAEFREILQENWLE 180 Query: 168 ACKLRGDQPLPIIATGHLTTVGASKS----------DAVRDI-YIGTLDAFPAQNFP-PA 215 D + GH + +S ++ R I ++G A +N P Sbjct: 181 LADNYCDDNGVNLFIGHFFFMKEGESSVAIGTEAEPESERPILHVGGTQALFTKNIPSQI 240 Query: 216 DYIALGHIHRAQII-GGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVP 274 Y ALGH+HR + V Y SP+ SF E + K V ++ + + + + Sbjct: 241 QYAALGHLHRYHSVGHEHCPVVYSSSPLAYSFSEADQEKKVVILKAAPNQEVEYHPVGLK 300 Query: 275 VTQPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRK-IQALTESLPV 333 +P+ K ++ L + P +++I T+ + RK I + + Sbjct: 301 QGRPLYRKK--FDNLPETLAWLEE---NPYCFVEITYVTEHSIDAATRKAIMKAHDGIVN 355 Query: 334 EVLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHT 393 + + + L + S+ ++F + +E +E L +F + Sbjct: 356 LIPQINNPAGTEDLSLQVEDLGK-DMSSLFQLFYKSEKGQEPNEE----LMEIFREVISQ 410 >UniRef50_B5YJR9 Exonuclease SbcD n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YJR9_THEYD Length = 387 Score = 218 bits (554), Expect = 3e-55, Method: Composition-based stats. Identities = 90/403 (22%), Positives = 161/403 (39%), Gaps = 28/403 (6%) Query: 2 RILHTSDWHLGQNFYS--KSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYA 59 +ILHTSDWHLG+ F + +D +++ + D +++AGD+FDT +P A Sbjct: 4 KILHTSDWHLGKVFKETTFELLPIQKQIMDEIVDITRKENPDIVLIAGDIFDTYNPSFEA 63 Query: 60 RTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMA-FLNTTVVASAGHAPQILPRR 118 ++ + L + C + LAGNHDS L S+ ++A + + ++A + + Sbjct: 64 EKIFYETLSRLSEQNCFVFALAGNHDSPDKLQISKPLIAGKHSIFIKSTAFDESKDIEFE 123 Query: 119 DGTPGAVL---CPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQ 175 + L L+ + + L + + + LA +Y ++ Sbjct: 124 NENFKLALENSFLKLHLKNEGTVIALKCLPYLSEVRLGLAG-DEYLKKVNELLSIEPQFS 182 Query: 176 PLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPP-ADYIALGHIHRAQIIGGMEH 234 + T HL+ GA +S + R IG ++ P P A YIALGH+HR Q + + Sbjct: 183 CDYFLLTSHLSIAGAQQSGSERIFQIGGIEYIPIDFLPKSAHYIALGHLHRHQKLR---N 239 Query: 235 VRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLE 294 Y GS P E K V + NGK + +E +P + + LE Sbjct: 240 ATYSGSIYPFDLAEIEHKKGVSVWE--NGKPDFIEFNKIPKIRKIE---------FDSLE 288 Query: 295 QWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQR 354 + E + + I I AL ++ ++ + ++ + Sbjct: 289 DAVKNAPEDEAYYYVLIKNPHAYTTAS--IDALLKAYRNRLVNWQFYTPDVPEEISIPEL 346 Query: 355 ETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGE 397 +L+E + F R +L++ Q + LF TL + Sbjct: 347 HSLNEEEMFIEFYR----AKLNKKPSQDILSLFLKTLEEVKNA 385 >UniRef50_D1PAG0 Nuclease SbcCD, D subunit n=1 Tax=Prevotella copri DSM 18205 RepID=D1PAG0_9BACT Length = 481 Score = 216 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 97/447 (21%), Positives = 175/447 (39%), Gaps = 73/447 (16%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+IL TSDWHLG F+ R EH+ FL WLLE + DA+++AGD+FD G+P + A+ Sbjct: 47 MKILATSDWHLGNLFHGNDRLPEHKHFLKWLLEQIAEQKPDALLIAGDIFDNGNPSAAAQ 106 Query: 61 TLYNRFVVNLQQ--TGCHLVVLAGNHDSVATLNESRDIMAFLNT---------------- 102 T+Y F+ + Q +++ AGNHDS + L R ++ + Sbjct: 107 TVYYEFLADATQLCPNMQVIITAGNHDSASRLEAPRPLLTRYHVEIRGNVRKIWKQGESE 166 Query: 103 -------TVVASAGHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLA 155 + S + G ++ +PFLR + + Sbjct: 167 DDDKTGGHWIYSFDDLIIPVTNEAGEE-VIILAVPFLRSDVVQNASY-----------SQ 214 Query: 156 AITDYYQQHYADACKLRGDQPLPIIATGHLTTVGAS--KSDAVRDIYIGTLDAFPAQNFP 213 + D+ ++ A+A + I H+ G+ K DA I IG + + + Sbjct: 215 GVNDFLRELTAEARQKY--PGRKCIMMAHMYAKGSDIAKKDASEKIIIGGQEEVDLEGWN 272 Query: 214 PA-DYIALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHL-----------VTFS 261 DY+ GHIH+ Q I + RY GS +P+SF E + + L Sbjct: 273 DHPDYMTCGHIHKRQHIWNTDWARYTGSILPMSFAEKDYTHGIDLITIEHGEEEEGKETG 332 Query: 262 NGKLESVENLNVPVTQPMAVLKGDLASIT----------AQLEQWRDVSQEPPVWLDIEI 311 K V+ L + +L D +T E+ + ++ +++ Sbjct: 333 KSKEWKVDFLEYKPQHALRILPEDEEELTFKKWQKLINSELSERTDGELSDHFDYVMLKV 392 Query: 312 TTDEYLHDIQRKIQALTESLPVEVLLVRR--------SREQRERVLASQQRETLSELS-V 362 ++ D ++++ L + ++R + + + + + + L + Sbjct: 393 KQEKLTSDDIKELEKLVNEKDAVLCKIQRIIPQLDLSTIQGSQHITSIEDIINRPPLDTL 452 Query: 363 EEVFNRRLALEELDESQQQRLQHLFTT 389 +E F R ++E Q++ L L TT Sbjct: 453 KEAFAIR-HNAPMNERQEKMLSDLLTT 478 >UniRef50_D1BNU6 Nuclease SbcCD, D subunit n=3 Tax=Veillonella RepID=D1BNU6_VEIPT Length = 453 Score = 216 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 84/460 (18%), Positives = 157/460 (34%), Gaps = 75/460 (16%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLD-WLLETAQTHQVDAIIVAGDVFDTGSPPSYA 59 MR LHT+DWHLG+ FY + + L+ + +D I++AGD+FD PP A Sbjct: 1 MRFLHTADWHLGRIFYGQYLTEDQAHVLEHQFFNILKDENIDGILLAGDIFDRAVPPIEA 60 Query: 60 RTLYNRFVVN----------------------------LQQTGCHLVVLAGNHDSVATLN 91 L++ + L Q+G H+ H ++ Sbjct: 61 IELWDSIITRLAMDYKVPLFVVSGNHDGAERLEVGRSMLGQSGIHIWGSP--HHALKPFE 118 Query: 92 E----------------SRDI-----MAFLNTTVVASAG-HAPQILPRRDGTPGAVLCPI 129 R I ++ NTT + + + Sbjct: 119 FEGTDGKVAICPMPFSEPRRIGEALGLSSANTTSATVQNLESVETKTKAKSKRSKSKKSF 178 Query: 130 PFLRPRDIITSQAGLNGIEKQQHLLAAIT----------------DYYQQHYADACKLRG 173 + + +N + +T D Q ++D + Sbjct: 179 QDVIEGSLFADVEDINAESTDTEIADIVTQCYEQNCESTLNLHNYDQMYQAWSDYLYKQV 238 Query: 174 DQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGME 233 + + IA H +G + R + +G + Q F Y ALGH+H +Q + G + Sbjct: 239 PKGMRSIAISHAFVMGGEVGGSERTLSVGGSEQVNPQAFKDFHYTALGHLHGSQRM-GAD 297 Query: 234 HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQL 293 +RY GSP+ SFDE + K ++ + + V V + + +L+G + L Sbjct: 298 RIRYSGSPLKYSFDEHMQKKSFTIIDMDTKGTVDISTIPVEVKRDVVILEGYFEDL---L 354 Query: 294 EQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQ 353 ++ ++ + + D K++ + L+ R + + A Sbjct: 355 NDKVLQAKHRDDYVQARLLDTMPIMDGMAKLRQVYHRCMTIDLVGRMAGPIADMGEAI-- 412 Query: 354 RETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHT 393 + L+E + F + E L E +QQ + ++ L Sbjct: 413 FKELNERDLFNQFAETVWKEPLTEKEQQYINSVWDRILKE 452 >UniRef50_C8X1L4 Metallophosphoesterase n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X1L4_DESRD Length = 416 Score = 214 bits (544), Expect = 6e-54, Method: Composition-based stats. Identities = 76/421 (18%), Positives = 140/421 (33%), Gaps = 61/421 (14%) Query: 2 RILHTSDWHLGQNFYSKSREAE---------HQAFLDWLLETAQTHQVDAIIVAGDVFDT 52 R LH +D HL + + LD L+ AQ +V +++AGD+FD Sbjct: 4 RFLHAADLHLDSPLRGLETYPDAPVEQIRNATRRALDNLVTLAQEQEVAFVLLAGDIFDQ 63 Query: 53 GSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP 112 + + + + L++ G + ++GNHD+ + + + N ++ Sbjct: 64 SWRDFHTALFFAQCMGRLREAGIPVYGVSGNHDAANPIG--KTLRPPDNVHFFSATKPGS 121 Query: 113 QILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLR 172 L I Q + ++ Y A Sbjct: 122 VTLE-------------------------HCNTVIHGQSYSSRETSEDLAAEYPPAVA-- 154 Query: 173 GDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGM 232 I H + G + + L DY ALGH+H +++ Sbjct: 155 ---GALNIGLLHTSLTGRPGHEPYAPTHPDILGN------KGYDYWALGHVHEREVVTRD 205 Query: 233 EHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMA--------VLKG 284 + + G+ E G K LV +G++ V + ++ V + Sbjct: 206 PWIVFPGTIQGRHIRETG-PKGCSLVEVEDGRIRDVVHQDIDVLRWFRGNVECGPCTCDD 264 Query: 285 DLA-SITAQLEQWRDVSQEPPVWLDIEITTD----EYLHDIQRKIQALTESLPVEVLLVR 339 D+ ++ A+L+ RD + PV + +E T LHD QR Q +L E+ + Sbjct: 265 DVRHAVRAELQAARDAGEGRPVAVRLECTGATQMHAQLHDRQRHFQEEWRTLAAEMGDLW 324 Query: 340 RSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHE 399 + + Q + + S + +A +EL ES L+ L + E Sbjct: 325 IEQIRLHTRPPEDQSQEVDPESPLGELMQCIAAQELPESCTNELEDLMKQLPKEITEGEE 384 Query: 400 A 400 Sbjct: 385 G 385 >UniRef50_B2HL38 DNA repair exonuclease n=1 Tax=Mycobacterium marinum M RepID=B2HL38_MYCMM Length = 410 Score = 214 bits (544), Expect = 6e-54, Method: Composition-based stats. Identities = 90/403 (22%), Positives = 153/403 (37%), Gaps = 17/403 (4%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 MR+LH SDWHLG+ Y SR +H+A L+ + A+ + I+ GD+FD P Sbjct: 1 MRLLHISDWHLGRMTYRYSRAPDHEAVLEETIGYARALRPHLILHTGDLFDAFRPGYAEM 60 Query: 61 TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD- 119 + L VV+AGNHDS A ++ + P+ + Sbjct: 61 ARGIDALQELAAIAPV-VVVAGNHDSPALFRLFNQLLGEGSRIRFIDQARRPEEGGVLEF 119 Query: 120 ---GTPGAVLCPIPFLR-PRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQ 175 G L P+PF+ R + + + + I D + + D Sbjct: 120 PGMGDEVIRLAPLPFVHANRMVERFEDSSTWMVTYADRIHLIEDALGRGLREGYDTSRD- 178 Query: 176 PLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGM-EH 234 ++ HL GA + R ++I + P Y A GHIHR Q + + Sbjct: 179 --VLLFAAHLYVSGARFCGSERPLHISDAYGCRLERLPQVSYAAFGHIHRPQALPTTVVN 236 Query: 235 VRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLE 294 RY GSPI L F E G+ K + +V G+ +V ++ +P+ L G I + Sbjct: 237 GRYAGSPICLDFGEEGEQKEIVIVEAEPGRPATVTTQSLSGGRPLRTLNGTFEEIRS--- 293 Query: 295 QWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQR 354 + + TD ++ + L V + R V+ + + Sbjct: 294 ---HAPTVGNALCRVTVRTDTPTENLSELLHELCPEATF-VDVNEDCAATRIEVVEATEA 349 Query: 355 ETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGE 397 + +E S+ ++F +A + + +R+ F L + E Sbjct: 350 QAEAEPSLRDLFRTYIAEQGTRGADAKRVLKRFEQLLDAVDEE 392 >UniRef50_O51769 Nuclease sbcCD subunit D n=23 Tax=Borrelia RepID=SBCD_BORBU Length = 413 Score = 213 bits (543), Expect = 7e-54, Method: Composition-based stats. Identities = 98/411 (23%), Positives = 177/411 (43%), Gaps = 32/411 (7%) Query: 2 RILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYART 61 +ILHTSDWH+G+ + S E + FL +LLE + +D ++VAGDV+D+ P + Sbjct: 5 KILHTSDWHIGKKIENFSILKEQKNFLYFLLEFIKKENIDLLLVAGDVYDSKRPGFEEQR 64 Query: 62 LYNRFVVNLQQTGCHL-VVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD- 119 L N F L T C VV++GNHD L+ ++ +++ N ++ QI+ +D Sbjct: 65 LVNNFFYELSFTSCKWCVVISGNHDKKDYLSINKKLLSRFNFFLITEYDSDEQIVLLKDN 124 Query: 120 GTPGAVLCPIPFLRPRDI----ITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGD- 174 G ++ +P + R I + GL + L + + Y++ ++ + Sbjct: 125 GNLKFIVVCLPHINERLILGQNFDNIFGLEDQYSSKLFLENLENAYREKISNLSNFLENK 184 Query: 175 -QPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNF-PPADYIALGHIHRAQIIGGM 232 + +P I H + K D +G P F Y+ALGHIH+ + Sbjct: 185 YKGIPKILMAHSFFGSSKKID-----TLGGSYIIPFNVFGNGFSYVALGHIHKFMKL--R 237 Query: 233 EHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQ 292 +++ Y GSP+ SF+E KY++++ F++ KL E VP+ + KG L + Sbjct: 238 DNIVYSGSPMQYSFNET-CDKYINVLHFNDNKLILQEAFPVPIFNKLIFAKGSLNEVLDF 296 Query: 293 LEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQ 352 L + + ++L IE+ + + I L + ++ + S + Sbjct: 297 LANSKKE-ESFTIYLKIELN-EAVDTSAEESIYDLARLNFMNLVSISYSLPSSQD--LQD 352 Query: 353 QRETLSELSVEEVFNRRLALEELDES-----------QQQRLQHLFTTTLH 392 + EL V E+ + ++L +++ L LF L Sbjct: 353 DSNFIGELEVLEMDEKYFFEKKLRWDFENGVIRDIKFKEEELISLFNEVLA 403 >UniRef50_Q63EZ2 DNA repair exonuclease n=76 Tax=Bacillus RepID=Q63EZ2_BACCZ Length = 432 Score = 213 bits (543), Expect = 8e-54, Method: Composition-based stats. Identities = 61/380 (16%), Positives = 118/380 (31%), Gaps = 57/380 (15%) Query: 1 MRILHTSDWHLGQNFYSKSR----------EAEHQAFLDWLLETAQTHQVDAIIVAGDVF 50 ++ +H +D HL F + + +++ A +VD +++AGD++ Sbjct: 23 VKFIHAADLHLDSPFKGMEMNVPQSVWERMKQSTFESFERIVDKAIQERVDFVLLAGDLY 82 Query: 51 DTGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGH 110 D + A+ + L Q + ++ GNHD + I N V + Sbjct: 83 DAETRSLRAQVFVREQMKRLSQYDIPVFIIHGNHDHLG--GSWAAIEFPENVHVFTEP-Y 139 Query: 111 APQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACK 170 + ++G A + +L A+TD Y Sbjct: 140 VEEKSFYKNGELLASIYGFSYL---------------------QQAVTDNMTAQYTKMSD 178 Query: 171 LRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIG 230 I H + G ++ + I L DY ALGHIH+ +I Sbjct: 179 A-----PFHIGMLHGSVEGDAEHNRYSPFQIRELKE------KQFDYWALGHIHKREISS 227 Query: 231 GMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGD----L 286 ++ Y G+ E G K +L+ + + V + D + Sbjct: 228 EAPYMIYPGNIQGRHRKETG-EKGAYLIELTKQGTQCSFFHTADVVWDEIEVSIDGLETV 286 Query: 287 ASITAQLEQWRDV--SQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSR-- 342 + + + +E L + T L R + + E + R Sbjct: 287 DDLMTSVSSAMNECRREEEGTLLTVVFTGQGPLSPYLRDEKRVEEIFHILAAGEERKDFV 346 Query: 343 ---EQRERVLASQQRETLSE 359 + + ++ + E L E Sbjct: 347 YAMKWKNETVSFAEIERLKE 366 >UniRef50_C0QDX0 DNA repair exonuclease family protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QDX0_DESAH Length = 419 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 75/427 (17%), Positives = 144/427 (33%), Gaps = 67/427 (15%) Query: 1 MRILHTSDWHLGQNFYSKSREAE---------HQAFLDWLLETAQTHQVDAIIVAGDVFD 51 ++ +HT+D HL + + D L++ A +VD I++AGD++D Sbjct: 2 VKFIHTADIHLDSPLKGLEVHDDAPVEEIRGATRRAFDNLIDLALEEEVDFILIAGDLYD 61 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA 111 ++ + L ++G + +++GNHD+ + L ++ + N T+ + Sbjct: 62 GDWKDYNTGLFFSARMGKLSKSGIKVFIVSGNHDAASQLTKTMPL--PDNVTLFSPRKPQ 119 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 L G ++ + A+T+ Y Sbjct: 120 SVKLDD----IGVIIHGQSYSH---------------------RAVTENLASQYPQY--- 151 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG 231 D I H + G + + L + DY ALGH+H +II Sbjct: 152 --DSNYFNIGLLHTSLTGREGHEDYAPCTMDDLKS------KGYDYWALGHVHTREIISE 203 Query: 232 MEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLAS--- 288 + + G+ E G +K LV+ +G++ VE + V + AV + DL+ Sbjct: 204 DPWIVFPGNIQGRHIKETG-AKGASLVSVEDGRIVKVEAFELDVLR-WAVCQVDLSECET 261 Query: 289 -------ITAQLEQWRDVSQEPPVWLDIEITTDEYLHD-IQRKIQALTESL---PVEVLL 337 + LEQ D P+ + + +T +H + + TE V+ Sbjct: 262 CEKIYDVVRQALEQALDQVDGKPLAIRLILTGSCPVHGKLLDQTTQWTEGFRSIAVQSGE 321 Query: 338 VRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQ----QRLQHLFTTTLHT 393 + + + E E + + + ELD L L Sbjct: 322 MWLETVKFQTTRKVSLEEMFGEDNPIAGLLKSVQQIELDGETLFRLVPELSALKNKLPAE 381 Query: 394 LAGEHEA 400 + E+ Sbjct: 382 IQTGDES 388 >UniRef50_B8HPI4 Nuclease SbcCD, D subunit n=28 Tax=Cyanobacteria RepID=B8HPI4_CYAP4 Length = 442 Score = 211 bits (537), Expect = 3e-53, Method: Composition-based stats. Identities = 85/414 (20%), Positives = 138/414 (33%), Gaps = 33/414 (7%) Query: 1 MRILHTSDWHLGQNFYS---------KSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFD 51 ++ILH SD HLG F +R + L ++ A VD ++ GD F Sbjct: 2 IKILHLSDVHLGSGFSQGRLNPVTGLNTRLEDFVTTLGRCIDRAIEEPVDLVLFGGDAFP 61 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVA-SAGH 110 +PP + + R L V+L GNHD + + + + G Sbjct: 62 DATPPPMVQEAFARQFRRLADASIPTVLLVGNHDQHSQGLGGASLCIYRTLGIPGFVVGD 121 Query: 111 APQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACK 170 + + +P+L + L E + LA + + A A + Sbjct: 122 RLATHLIQTQHGPIQILTLPWLTRSTL------LTRPETEGLSLAQVNQLLIERLAIALE 175 Query: 171 ---LRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNF--PPADYIALGHIHR 225 R D LP + HL A A R + + P P DY+ALGH+H+ Sbjct: 176 GEIRRLDPQLPTVLLAHLMADSARY-GAERFLAVSKGFTIPLSLLTRPCFDYVALGHVHK 234 Query: 226 AQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGD 285 Q++ V Y GS + F E G+ K LV G+ + + +PV + L D Sbjct: 235 HQVLSTDPPVVYPGSIERVDFGEEGEEKGYVLVEVERGR-ANFQFCPLPV-RQFRTLNVD 292 Query: 286 LASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQR 345 ++ + Q + I D +I+ + L V S Sbjct: 293 VSEHCDPQQALLAAIQAEDLNGAIVRLIYHLRSDQLNQIEMAA---LHQALQVAHSYTIH 349 Query: 346 ERVLASQQRETLSEL------SVEEVFNRRLALEELDESQQQRLQHLFTTTLHT 393 +++ R L EL E L+ E + + L Sbjct: 350 PELVSQLARPRLPELGLGVGIDPLEALQTYLSNRPDLEEIAKEMTWAAQHLLAG 403 >UniRef50_C6IVB9 Metallophosphoesterase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IVB9_9BACL Length = 441 Score = 211 bits (536), Expect = 5e-53, Method: Composition-based stats. Identities = 79/427 (18%), Positives = 130/427 (30%), Gaps = 63/427 (14%) Query: 2 RILHTSDWHLGQNFYSKS---------REAEHQAFLDWLLETAQTHQVDAIIVAGDVFDT 52 R LH +D HL F S + L+ A VD ++++GD++D Sbjct: 7 RFLHAADLHLDTPFSGMSGVPDRLRELLRESTFTAFERLIRLAIEEAVDFVVISGDIYDA 66 Query: 53 GSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP 112 A+ L + G + ++ GNHD ++ + + T + Sbjct: 67 SDSSLRAQLRLREGWDKLGEHGIPVYLIRGNHDPLS--GRRLRLALPDHVTEFGPKAESV 124 Query: 113 QILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLR 172 + R DG P AVL + P ++ A + Sbjct: 125 IAVRRSDGEPVAVLTGASYPTP-------------------------AVHENLAIQYRRE 159 Query: 173 GDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGM 232 L I H G DA + L A DY ALGHIH+ QI+ Sbjct: 160 PGSALYHIGLLHGNVDGQEGHDAYAPCSLRDLQA------SGYDYWALGHIHKRQILCDS 213 Query: 233 EHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMA---------VLK 283 V Y G+ S E G K +LV + + + + + Sbjct: 214 PWVVYPGNIQGRSLKETG-PKGCYLVEVAENGEAELSFRRLDQVLWLESGLAIDGLATEE 272 Query: 284 GDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSRE 343 S+ +L++ R+ + + + T LH + + E L E Sbjct: 273 ALKVSVEERLDELREAEPDRITVVRLIFTGRGPLHGMLQSGPEAAELLQELRRKELGRFE 332 Query: 344 QRERVLASQ----------QRETLSELSVEEVFN-RRLALEELDESQQQRLQHLFTTTLH 392 L E+ F L E ++ +R++ L T L Sbjct: 333 AAGLGEGIVWPAGFKLETGMELDREGLLAEDSFLGELFRLGERTAAEPERVEELVGTALA 392 Query: 393 TLAGEHE 399 LA + Sbjct: 393 PLADNRQ 399 >UniRef50_D1C2F9 Nuclease SbcCD, D subunit n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C2F9_SPHTD Length = 413 Score = 206 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 86/420 (20%), Positives = 151/420 (35%), Gaps = 29/420 (6%) Query: 1 MRILHTSDWHLGQNFYSK--------SREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDT 52 MR+LH +D HLG Y SR ++ A D +++ A H+VDA++ AGD F Sbjct: 1 MRLLHFADLHLGMENYGTLDTRLGYSSRVRDYLAAFDQVVDHAIEHRVDAVLFAGDAFKH 60 Query: 53 GSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTV-VASAGHA 111 P + + + + L V+L GNHD + + + + + Sbjct: 61 RDPSPTIQREFAKRIRRLAAAEIPTVLLVGNHDLPSIDARATPMDIYATLDIPFIYVARN 120 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 P +L + +P+L + ++ + N + A + + Sbjct: 121 PDVLRIETRGGPLQVVTLPWLSRQRLLDPEQRRNPDPG--AVSRAAAEATSAILSALVDQ 178 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNF--PPADYIALGHIHRAQII 229 D P + HL+ GA + + I +G DY+ALGHIH+ Q I Sbjct: 179 L-DPDTPAVLLAHLSIEGARL-GSEQSIMLGEDLVLDTDELRVRAFDYVALGHIHQHQQI 236 Query: 230 GGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNG--KLESVENLNVPVT-QPMAVLKG-- 284 Y GS + F E + K LV G VE PV +P L+ Sbjct: 237 TARPPTVYAGSLERIDFGEEREEKGFVLVDIQPGPAGERRVEWTFQPVRSRPFVTLRIKT 296 Query: 285 ----DLASITAQLEQWRDVSQEP--PVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLV 338 + + ++E+ ++ + +E L + + L +V Sbjct: 297 LHEDPMVDVEREIERRTADLDGAIVRAFIAVPPEREELLRIDEVRRMLLQRGAAYVAKVV 356 Query: 339 RRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEH 398 R Q + + ETL ++ E + L+L +L E Q++R+ + Sbjct: 357 RDVDLQVRPRIELRDHETLDPVAALE---KWLSLRDLTEDQRRRILEAGKALIQAERDGE 413 >UniRef50_Q12WJ5 Metallophosphoesterase-domain protein n=1 Tax=Methanococcoides burtonii DSM 6242 RepID=Q12WJ5_METBU Length = 436 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 61/384 (15%), Positives = 119/384 (30%), Gaps = 60/384 (15%) Query: 3 ILHTSDWHLGQNFYSKS---------REAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTG 53 +H +D HL F S + +++ D ++++GD++D+ Sbjct: 17 FVHAADLHLDSPFLGLSEINTKLSQVMAKATFDAYNNIIDLCIEKNADFLLISGDIYDSA 76 Query: 54 SPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ 113 YA+ + + L G + GNHD + S + N + S Sbjct: 77 DKSLYAQLKFLEGLKRLSSAGIAAYITHGNHDPLN--GWSASLEWPANVKIF-SGDDVET 133 Query: 114 ILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRG 173 + +DG A + I + T + Q++ A + + Sbjct: 134 VFVEKDGNVIASINGISYR-------------------------TKHIQENLAKRFQKKD 168 Query: 174 DQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGME 233 I H T I L DY ALGHIH Q++ Sbjct: 169 ALSPFTIGMLHCTVDSGGGHYPYAPCSIQDLKE------TNYDYWALGHIHYPQVLETDP 222 Query: 234 HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVP-VTQPMAVLKGD------- 285 ++ Y G+P + E G + LV ++ + V V + L D Sbjct: 223 YIVYSGNPQGRNPGELG-ERGCTLVEVDQKGNIKLDFVPVDSVRWYVEELYVDGLETEAE 281 Query: 286 -LASITAQLEQWRDVSQEPPVWLDIEITTDEYL-------HDIQRKIQALTESLPVEVLL 337 + + +++ ++++ + + L + +Q L + V Sbjct: 282 LIELLEETMDKLSEIAEGRYIISRFILRGRSPLKRFLMKDDSLNDLVQHLRDDYDVGSGS 341 Query: 338 VRRSREQRERVLASQQRETLSELS 361 V R Q + ++ L+ Sbjct: 342 VWVERLQDKTSFPIERESLLNRQD 365 >UniRef50_D2MIU1 Ser/Thr protein phosphatase family protein n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MIU1_9BACT Length = 424 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 70/421 (16%), Positives = 136/421 (32%), Gaps = 63/421 (14%) Query: 1 MRILHTSDWHLGQNFYSKSREA---------EHQAFLDWLLETAQTHQVDAIIVAGDVFD 51 ++ +H +D HL + R + D L++ A +V+ +++AGD++D Sbjct: 5 VKFIHAADIHLDSALHGLERYEGAPVEEIRSATRRAFDNLVDLAIDEKVNFVLLAGDLYD 64 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA 111 + + L++ G + ++AGNHD+ + + + + N + ++ Sbjct: 65 GDWKDYNTGLYFVERMGRLREAGIRVFIVAGNHDAASQIAKHLRL--PENVNLFSTRNPE 122 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 IL + F A+TD Q Y Sbjct: 123 QVILDD----LNVAVYGQGFA---------------------TRAVTDDLSQAYPQ---- 153 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG 231 GD L I H G + I L + Y ALGH+H + + Sbjct: 154 -GDPQLFNIGMLHTCLDGKPGHEPYAPCTIDGLRS------KGYQYWALGHVHNREEVSR 206 Query: 232 MEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQP---------MAVL 282 + + G+ + E G K LVT +G + VE+ ++ V + + Sbjct: 207 EPWIVFPGNIQGRNIREAG-PKGCTLVTVESGDIIEVEHRDLDVMRWSLCELDVSGSETV 265 Query: 283 KGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLL----- 337 + +L+ D ++ PV + + + H + L + + Sbjct: 266 DDIYEQVREELQSALDSAEGRPVAVRLVLQGTCSAHAKLHVDRMLWIQEYRALAMGLGGA 325 Query: 338 -VRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAG 396 + + + + E L R + ELD + L +T L Sbjct: 326 GIWLEKVFIKTKPSYSVDEVLERDDALSGLLRTIRDMELDAAALDELADEISTLRQKLPA 385 Query: 397 E 397 E Sbjct: 386 E 386 >UniRef50_UPI0001C419A3 DNA double-strand break repair protein Mre11 n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C419A3 Length = 463 Score = 204 bits (518), Expect = 6e-51, Method: Composition-based stats. Identities = 70/407 (17%), Positives = 134/407 (32%), Gaps = 45/407 (11%) Query: 1 MRILHTSDWHLG-QNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYA 59 MR H SD HLG + F RE + + ++ VD +I +GD+FD+ P + A Sbjct: 1 MRFAHISDSHLGCRQFGLLEREKDFYEVFNRTIDKIIEEDVDFVIHSGDLFDSNRPSTEA 60 Query: 60 RTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 + + ++ L + + +AGNHDS+ + F + + + P Sbjct: 61 LLTFQQALLRLNEAKIPVYAIAGNHDSILRKGSLPPQVLFKDIGLNIISPEHPV-----H 115 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 ++C +PF N + K D + Sbjct: 116 QLGAVLICGVPFATSSQKNALVENYNILSKVA----------------------DTAVKS 153 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFP-PADYIALGHIHRAQIIG-GMEHVRY 237 I H D+ + P DY A+GH+H + G + Y Sbjct: 154 ILVSHQGISKWMPEDSY---------EIDLDDLPKNFDYYAMGHLHNFYVEDYGKGKLVY 204 Query: 238 CGSPIPLSFDECG-----KSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQ 292 GS E K +V S + +VE + + + + + + + Sbjct: 205 PGSMEINRTSELNDNFKEFGKGFCIVDLSED-IPTVERVTIDLARKFYNEIIEYDKLDER 263 Query: 293 LEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQ 352 L + + V ++IT + + + E + +VL R + + ++ Sbjct: 264 LSVIEEELKTLEVKPIVDITVRGGDFESADVYEKINEKIGNDVLSFRPTFKPDNVLIGEN 323 Query: 353 QRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHE 399 Q + L + + + + + E + L T GE + Sbjct: 324 QLDGDKTLDPKTLLKQTVDKKFAREEVTKLSVDLLDTLSEKRMGEAK 370 >UniRef50_C6P7X1 Nuclease SbcCD, D subunit n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6P7X1_CLOTS Length = 406 Score = 203 bits (516), Expect = 9e-51, Method: Composition-based stats. Identities = 72/417 (17%), Positives = 156/417 (37%), Gaps = 41/417 (9%) Query: 3 ILHTSDWHLGQNFYS--------KSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGS 54 I HT+D H+G Y +R + D ++ + D +++GD++ + Sbjct: 4 IAHTADIHIGIENYGTINKKTGLNTRLEDFLNAFDKFVDYSI-ENCDIAVISGDMYKSRE 62 Query: 55 PPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESR-----DIMAFLNTTVVASAG 109 P + + + L Q +V+ GNHD + +++R I+ N V Sbjct: 63 PNPTQQRELAKRIKRLSQH-IPVVINNGNHDQPNSDSKARAFDIYKILDVDNVYV----A 117 Query: 110 HAPQILPRRDGTPGAVLCPIPFLRPRDIITSQA--GLNGIEKQQHLLAAITDYYQQHYAD 167 + P + + + +P+ ++ + L+ + + ++ I D Sbjct: 118 NKPDVFLIKTKNGPIQIACLPYFPKSFLLKLEESKNLSIDDINKKMVEKINTIL-----D 172 Query: 168 ACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFP--PADYIALGHIHR 225 + D +P I + HL+ GA S + + I IG P Y+ALGHIH+ Sbjct: 173 ILTSKLDSSIPSILSAHLSVTGAVTS-SEKSIMIGDDVVVPISVIARHQYKYVALGHIHK 231 Query: 226 AQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGD 285 Q++ Y GS + F E K V G+ + ++ ++ + Sbjct: 232 YQVVWDTPLTVYSGSIEKIDFGEERDEKGFCHVIID-GEKVLHKFIST-NSREFKTINIQ 289 Query: 286 LASITAQLEQWRDVSQEPPV---WLDIEITTDEYL--HDIQRKIQALTESLPVEVLLVRR 340 + S + E+ D + + + + + T + + H R+I + ++R Sbjct: 290 VKSNISPTEEILDKLKRYDLSKSIVRLNLKTTKEIDKHIRYREINKYFIQNSYYFVGIKR 349 Query: 341 SREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQH---LFTTTLHTL 394 + + L + E +L+ + ++ +LD + + L+ L+ + + Sbjct: 350 DFDIDKGAL--RNPEINEQLNPLDALSKYFLSIDLDVDKNELLKRASLLYKELIEEV 404 >UniRef50_Q46GD4 Phosphoesterase n=2 Tax=Methanosarcina RepID=Q46GD4_METBF Length = 422 Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 74/417 (17%), Positives = 141/417 (33%), Gaps = 65/417 (15%) Query: 1 MRILHTSDWHLGQNFYSKS---------REAEHQAFLDWLLETAQTHQVDAIIVAGDVFD 51 M +H +D HL F S + +++ +VD +++AGDV+D Sbjct: 1 MSFVHAADLHLDSPFTGISEIDPELGERLAKATFQAYEAIIKLCMEEEVDFLLIAGDVYD 60 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA 111 + YA+ + + L+ G + + GNHD + S + N ++ S A Sbjct: 61 SADKSLYAQVRFIEGLRKLETAGIQVFICHGNHDPLD--GWSASLTWPENVHIM-SGDRA 117 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 + +++G AV+ + + T + ++ Sbjct: 118 EVVEFKKEGETAAVIVGMSYP-------------------------TRHIMKNLVKNFPR 152 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQII-G 230 + D I H + + D + L DY ALGHIH I+ Sbjct: 153 KEDNWPFTIGLLHCSVGSNPEHDPYAPCTLQDLRKI------NYDYWALGHIHTPSIVCK 206 Query: 231 GMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVP-VTQPMAVLKGD---- 285 V Y G+P E G ++ +V S+G S + V + + + Sbjct: 207 EAPVVIYPGNPQGRHLGENG-ARGCFVVDVSSGGDISTRFMETDSVRWYIREISIEGLEK 265 Query: 286 ----LASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRK-------IQALTESLPVE 334 + S+ +QL++ R+ S V + LH I R+ ++ L E Sbjct: 266 EGELIESLQSQLDEMRENSGGRSVICSFVLKGRGPLHHIFRQDGFLEDLLRLLREGETWG 325 Query: 335 VLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDE----SQQQRLQHLF 387 + R + + + ++ L + + + DE ++ L LF Sbjct: 326 RQFLWVERIEDDTLFPVERELLLKREDFVGDLVKIVEGSKTDEKALDEFREALSPLF 382 >UniRef50_UPI00016C3AE3 ATP-dependent dsDNA exonuclease n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3AE3 Length = 411 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 92/416 (22%), Positives = 148/416 (35%), Gaps = 25/416 (6%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVF-DTGSPP--S 57 MRILHT+DWHLG R + + ++ + + VD ++VAGD+F + P Sbjct: 1 MRILHTADWHLGDRLGRIDRTDDLRRAVERVAAHCKEQNVDVLLVAGDLFSELARPDGLR 60 Query: 58 YARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTV----------VAS 107 + +TG ++ L GNHD+ M+ + T+ Sbjct: 61 ETIRHWQEVFREFLETGGTILTLTGNHDNENFCQTLVSAMSLASPTIGRPGEVVPPGRLY 120 Query: 108 AGHAPQILPRRDGTP--GAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHY 165 P L D T +PF P A L ++ ++ + Sbjct: 121 LAAEPTFLRLEDRTDGFPVQFVLMPFPTPHRFFRGDAALKYGSPEEKNALLVSAWADALR 180 Query: 166 ADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFP-PADYIALGHIH 224 + D P + + H+ G++ ++ I I + P DY+ALGHIH Sbjct: 181 EIRAHPKYDPTAPAVLSAHVHIHGSTVGPSLFRITIEEDVVVEGADLPQQFDYVALGHIH 240 Query: 225 RAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFS-NGKLESVENLNVPVTQPMAVLK 283 + Q++ G H+RYCGS + E G K V LV G+ E L++P T V+ Sbjct: 241 KPQVV-GAPHMRYCGSIERMDLGEQGDQKGVVLVDIGRTGRNGEPEVLSLPSTPIYEVVV 299 Query: 284 GDLASITAQLEQWRDVSQEPPVWLDIEIT-TDEYLHDIQRKIQALTESLPVEVLLVRRSR 342 D A +L + +Q V L I T + L D+ R + + Sbjct: 300 LDPAQDIPRLREEFPDAQNDLVNLQIRYTSGKDQLEDVLRDLDRIFPRWYAR----DWQE 355 Query: 343 EQRERVLASQQRETLSELSVEEVFNRRLALE--ELDESQQQRLQHLFTTTLHTLAG 396 E E L E + DE ++ + + L L Sbjct: 356 TGALGPTLVNPAEGAGGKGFGETVREYLGQELVQHDEGERDAILKIAEGLLKELEN 411 >UniRef50_B3QT16 Nuclease SbcCD, D subunit n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QT16_CHLT3 Length = 410 Score = 202 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 87/411 (21%), Positives = 163/411 (39%), Gaps = 20/411 (4%) Query: 1 MRILHTSDWHLGQNFYSK--------SREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDT 52 M+ILHT+D H+G + K +R + Q D+L++TA ++DA++ GD + Sbjct: 1 MKILHTADIHIGYTTHGKLDQQAGLNTRLLDFQKSFDFLVQTALDEKIDALLFCGDAYRD 60 Query: 53 GSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDI--MAFLNTTVVASAGH 110 +P + ++ R + + + +V++ GNHD + + L VV Sbjct: 61 ATPSPTEQQIFARCLKPILEANIPVVMVVGNHDHPFAHGRANALQIFQELAAQVVVIDKL 120 Query: 111 APQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACK 170 Q++ + G V P P + A + E + + ++ + ADA + Sbjct: 121 EVQLVETKSGLLRIVGLPWPVRTNLFAKEAYAAFSPEELKSKIHEFYLEFILEQ-ADALR 179 Query: 171 LRGDQPLPIIATGHLTTVGASKSDAVR--DIYIGTLDAFPAQNFPPADYIALGHIHRAQI 228 + D+ +P I GHL A S + R + + + A DYIALGHIH+ Q Sbjct: 180 EQPDE-IPSILAGHLHIDTAMMSKSERITLLAKDPMFSVGALAHKEFDYIALGHIHKFQD 238 Query: 229 I--GGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGD- 285 + G V Y GS +SF+EC + K +VT + K S + P +P D Sbjct: 239 LNPGNQPPVVYSGSIERISFNECDEEKGFVMVTIDDAKRVSYARVLTPA-RPFVSFDIDV 297 Query: 286 -LASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQR-KIQALTESLPVEVLLVRRSRE 343 L S +++++ + + + I + E+L L+ S E Sbjct: 298 TLKSPEPMAFILAEIAKKNIADAIVRVRILCSIDQKSEIDISTIKEALQEAFLVSEVSVE 357 Query: 344 QRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTL 394 E+ + + ++ E + + ++++ + L Sbjct: 358 VNEKPKRLRNPDLSKTMTAAEALEIYVEQNAQFKPIKEKVLKIAAELESGL 408 >UniRef50_C6D5T8 Metallophosphoesterase n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D5T8_PAESJ Length = 422 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 76/403 (18%), Positives = 132/403 (32%), Gaps = 57/403 (14%) Query: 2 RILHTSDWHLGQNFYSKSREAE---------HQAFLDWLLETAQTHQVDAIIVAGDVFDT 52 R +H +D HL F S+ + + L L +TA QVD I+++GD++D Sbjct: 6 RFIHAADLHLDSPFRGMSKVPDALKEKLMASTFSALRRLSDTAIQEQVDFIVISGDLYDE 65 Query: 53 GSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP 112 A+ L + LQ+ G + V+ GNHD + ++ N T + G Sbjct: 66 ADRSLKAQFLLLKEWERLQRYGISVFVIHGNHDPLN--GAKAELKLPSNVTQFGANGMEY 123 Query: 113 QILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLR 172 + R+G A + + + + A + +E Sbjct: 124 RPAYCRNGELAAFVYGMSYGKRHVTENIAARYSPVEG----------------------- 160 Query: 173 GDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGM 232 IA H G D + L DY ALGHIH +++ Sbjct: 161 ---APFHIALLHGNVNGDPSHDPYAPCLLEELTG------KGFDYWALGHIHTRKVLHEY 211 Query: 233 EHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQP---------MAVLK 283 HV Y G+ + E G K ++ S + + + + + + + Sbjct: 212 PHVVYSGNIQGRNPRETG-PKGCYVAEVSASRAVQLTFIPLDDVRWLDAELSINGLHTEQ 270 Query: 284 GDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDI---QRKIQALTESLPVEVLLVR- 339 L + +EQ PV + + + LH ++ L + L L Sbjct: 271 ELLQQMEELVEQLAAEGDGRPVMVRLTLEGQGPLHHKLTEMITVRTLLDQLQQGSLHAWV 330 Query: 340 RSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQR 382 + E R + E+F LE E+ +Q Sbjct: 331 YALEGNTRAELRLSELEEEDSFAGELFRLAQRLERDSEAWRQE 373 >UniRef50_C1PA25 Metallophosphoesterase n=1 Tax=Bacillus coagulans 36D1 RepID=C1PA25_BACCO Length = 424 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 63/422 (14%), Positives = 131/422 (31%), Gaps = 68/422 (16%) Query: 3 ILHTSDWHLGQNFYSKSREA---------EHQAFLDWLLETAQTHQVDAIIVAGDVFDTG 53 +H +D HL + + L++ A QV +I+AGD++D Sbjct: 5 FIHAADIHLDSPLAGLEQYEGAPVEKIRGATREAFKNLVDAAIERQVHFLIIAGDLYDGN 64 Query: 54 SPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ 113 + +V LQ+ G + ++ GNHD+ + + + N Sbjct: 65 WKDYNTGLFFTSQMVRLQKEGIPVFLIRGNHDAANLMT--KSLKLPENVHEFPVKAPETV 122 Query: 114 ILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRG 173 L A I Q A+ + ++Y Sbjct: 123 TL-------------------------DALGVAIHGQGFAQRAVEENLVKNYPPKK---- 153 Query: 174 DQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGME 233 + I H + G + I + DY ALGHIH +++ + Sbjct: 154 -EGYFNIGILHTSATGREGHENYAPCTIEDM------MEKQYDYWALGHIHMRELLHPHD 206 Query: 234 HVR-YCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQ---------PMAVLK 283 V + G+ E G K V +G +E +E + + V + + + Sbjct: 207 PVILFPGNIQGRHIRETG-EKGCTYVEIKDGTIEKMEPIPLDVLRWTLCPVDMGDIETVD 265 Query: 284 GDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHD--------IQRKIQALTESLPVEV 335 G + + + LE+ + + + E+ +H + +++++ Sbjct: 266 GLMDAARSALEKAYAEADGRYLAVRFELAGATKMHRELIAKKDLLLNQLRSIALETGFGE 325 Query: 336 LLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLA 395 + V + + + + + E S + + DE + L F+ + Sbjct: 326 IWVEKVKIKTTGLNDADAFS--DEQSPIGTVLKFIRSTAEDEEMLEALLDEFSDIRQAIP 383 Query: 396 GE 397 E Sbjct: 384 HE 385 >UniRef50_A6BZ13 Putative exonuclease n=1 Tax=Planctomyces maris DSM 8797 RepID=A6BZ13_9PLAN Length = 417 Score = 197 bits (500), Expect = 6e-49, Method: Composition-based stats. Identities = 64/407 (15%), Positives = 124/407 (30%), Gaps = 69/407 (16%) Query: 2 RILHTSDWHLGQNFYSKSREA---------EHQAFLDWLLETAQTHQVDAIIVAGDVFDT 52 R +H +D HL + + L L++ A V +++AGD++D Sbjct: 3 RFIHAADIHLDSPLKGLEQYEGAPVEIIRTAPREALVNLVDLAIDESVAFVLIAGDLYDG 62 Query: 53 GSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP 112 + R L+ G L +++GNHD+ + R + N T + Sbjct: 63 DWRDFNTGLFFIRQAQRLRDAGIPLYLISGNHDAANRIT--RSLQLPENVTFFSPTQAET 120 Query: 113 QILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLR 172 +++P D + F AA+ D Q+Y A Sbjct: 121 KLIPELD----VAIHGQSFA---------------------TAAVYDNLAQNYPAA---- 151 Query: 173 GDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGM 232 I H G+ + + L DY ALGHIH+ +I+ Sbjct: 152 -HSGCFNIGVLHTCATGSEGHERYAPCTLEDLK------IHNYDYWALGHIHKREILCED 204 Query: 233 EHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPM---------AVLK 283 + + G+ E G K LVT + + E + + + L+ Sbjct: 205 PLIAFSGNIQGRHIRETG-PKGCLLVTVDDERRLRTEFRALDILRWERAIVDLDGARSLE 263 Query: 284 GDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSRE 343 L ++ +E ++ + L I++ H+ L + +R Sbjct: 264 EALERVSTTMETLFGQAEGRTLALRIDLQGACPAHN------ELLARRHQLIAEIRVRAL 317 Query: 344 QRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTT 390 ++ ++ E+ + + +F Sbjct: 318 DVGGGEIWIEKIKINTSDPA------SGNTEISDDALGEIHQVFAQV 358 >UniRef50_Q2S4Q6 Nuclease SbcCD, D subunit subfamily, putative n=2 Tax=Rhodothermaceae RepID=Q2S4Q6_SALRD Length = 453 Score = 195 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 79/429 (18%), Positives = 149/429 (34%), Gaps = 37/429 (8%) Query: 3 ILHTSDWHLGQNFYSK--------SREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGS 54 +LHT+D HLG + + +R + + L+ +++ A VDA + GD + T Sbjct: 25 LLHTADIHLGFKTHGRRDPDTGLNTRLLDVRRSLEAVVQRALDADVDAFLFCGDAYHTAD 84 Query: 55 PPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLN----TTVVASAGH 110 P + ++ + + L +V++ GNHD T + + F + Sbjct: 85 PTPTQQDIFVQCLRPLADADIPVVLIVGNHDHPVTFGRASSLDIFDHIAGAVHCYRKPAS 144 Query: 111 APQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADAC- 169 + Q+L + G + P P ++ E +Q + Y Q+ A+ Sbjct: 145 SVQVLDTKSGPLQLIPLPWPIRSQILAKDEYRRMSPDELRQFVEEHYVTYVQRRAAEIME 204 Query: 170 ----------KLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFP--PADY 217 + +P + GH+T GA+ S + I + F P DY Sbjct: 205 AETGITPEGTEHALSPDVPTVLAGHVTVQGAALSGSEHTTTIASEPKFTVGQLAVRPIDY 264 Query: 218 IALGHIHRAQIIG--GMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNV-P 274 +ALGH+HR Q G V Y GS ++F+E + K V LV + V Sbjct: 265 VALGHVHRPQNRNEEGHPPVVYSGSIERVTFNEADEDKGVQLVDIDPARDPVTHTTFVET 324 Query: 275 VTQPMAVLKGDLASITAQLEQWRDVSQEPPVW-----LDIEITTDEYLHDIQRKIQALTE 329 +P + D E+ QE V + + ++ +++ Sbjct: 325 PARPFVAVSVDARDADDPTERVLAAIQERDVADAIVRVRYRVREEQVAQVDPERLREALA 384 Query: 330 SLPVEVLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTT 389 + + R + + RE+ +EE + + + ++ L Sbjct: 385 AADTVAGIERTVDPADRKRRTAVTRES----GLEEAVRQYVGQHDELSGLEEDLVEAALA 440 Query: 390 TLHTLAGEH 398 L + Sbjct: 441 LEAGLEADE 449 >UniRef50_Q03GD7 DNA repair exonuclease n=2 Tax=Pediococcus RepID=Q03GD7_PEDPA Length = 407 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 63/364 (17%), Positives = 122/364 (33%), Gaps = 58/364 (15%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQA---------FLDWLLETAQTHQVDAIIVAGDVFD 51 M+ +H +D HLG F + + L++ A + VD + +AGD+FD Sbjct: 1 MKFIHAADIHLGSPFQGLKNIPANIRKRVVSSTGVAMKNLVQAAIENTVDFVCIAGDLFD 60 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA 111 P L + L + + GNHD + + ++ N ++ Sbjct: 61 NPEPDLETLNLAIDQLEILNAANIPVFLSYGNHDYLN--AKIPGVIFPDNVSIFGEKVET 118 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 Q + DG+ + + + +I + Sbjct: 119 KQ-ITLVDGST-VDITGFSYNKRAEIN-------------------------ARIEEYPS 151 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG 231 + +Q I H + G S+A + DY ALGHIH+ Q + Sbjct: 152 KSNQADFQIGMLHGSMDGLKSSEAHYAPF-----TISQLLAKNYDYWALGHIHKRQTLND 206 Query: 232 MEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKG------D 285 M + Y G+ +E G + + LVT + K V+ L V + D Sbjct: 207 MPVIAYAGNTQGRHINEPG-PRGISLVTINQQKQTDVQFLRTDVV-EWTNVAVQAQKGMD 264 Query: 286 LASITAQ-LEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQ 344 L I + ++ ++ + ++I + L + + L ++L + ++ Sbjct: 265 LQQIISAIIQAVEPLAAQQLKLVNINLQNSNVLTP------EILDELTSGIVLTQIQKQL 318 Query: 345 RERV 348 + V Sbjct: 319 DQEV 322 >UniRef50_UPI0001788541 metallophosphoesterase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788541 Length = 435 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 69/405 (17%), Positives = 124/405 (30%), Gaps = 68/405 (16%) Query: 2 RILHTSDWHLGQNFYSKSREAE---------HQAFLDWLLETAQTHQVDAIIVAGDVFDT 52 R +H +D HL F S + L+ L+E A QVD I+++GDV+D+ Sbjct: 5 RFIHAADLHLDSPFIGISGLDDDLRSFVQESTFRALERLVELAIGEQVDFIVISGDVYDS 64 Query: 53 GSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP 112 + A+ + + L + G + V+ GNHD + + + + V + A Sbjct: 65 SNISLRAQLRFLDSLNRLGREGIAVYVIHGNHDPLD--SAKLSMTLPSHVHVFGAEPAAV 122 Query: 113 QILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLR 172 + R D AV+ + + + +TD Y Sbjct: 123 TAVRRSDQQEVAVIAGMSY---------------------PTSKVTDNIAIRYP-----A 156 Query: 173 GDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGM 232 L I H G + + L Y ALGHIH + + Sbjct: 157 PSPGLYHIGLLHANVDGDPQHETYAPCTKKEL------VQAGFHYWALGHIHSRRTLQES 210 Query: 233 EHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQ------PMAVLKGDL 286 ++ Y G+ E G K ++V + + + P+ + D+ Sbjct: 211 PYIVYPGNIQGRHVRETG-PKGCYVVDVDGSFNTKLSFHELDSMRWNVVEAPIDACR-DV 268 Query: 287 ASITAQLEQWRD----VSQEPPVWLDIEITTDEYLH-------------DIQRKIQALTE 329 LE + + + + +T +H R+ +A Sbjct: 269 DEWRRSLESILTDTARANADRLSMIRVRVTGRSPVHRQLEGGYVLDELLTDLRRREAAKG 328 Query: 330 SLPVEVLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEE 374 V + A L+E S R + E+ Sbjct: 329 KTCGYRGCVWIESFSLQSGDAIDTERLLAEDSFTGDLLRLVRKEQ 373 >UniRef50_D2MIT5 Exonuclease subunit SbcD (Fragment) n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MIT5_9BACT Length = 233 Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 84/237 (35%), Positives = 122/237 (51%), Gaps = 9/237 (3%) Query: 1 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60 M+ILHT+DWH+GQ + + R EH+ FL+WLLET Q HQV+ ++V+GD+FDT P S + Sbjct: 1 MKILHTADWHIGQRLHERQRTDEHKRFLEWLLETIQAHQVELLLVSGDIFDTALPSSEST 60 Query: 61 TLYNRFVVNL-QQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ-ILPRR 118 LY RF+ L +T + V+ AGNHDS L R+ + VV +A + ++ Sbjct: 61 NLYYRFLYRLFSETDAYTVITAGNHDSPRHLEAPREFLEMGRIYVVGTADEPTKCVVTLP 120 Query: 119 DGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLP 178 P + +PFL D+ E + + ++ YAD LP Sbjct: 121 RENPRIAVAAVPFLSESDLRHL-----SYETEVDRNERYRERFKTFYADCVANM-PAELP 174 Query: 179 IIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFP-PADYIALGHIHRAQIIGGMEH 234 I GHL G D+ R++ IG A A +FP Y+ALGH+HR Q I G ++ Sbjct: 175 KILMGHLFVQGGQVGDSERNVQIGGATATHASDFPKDVSYVALGHLHRPQTIKGTDY 231 >UniRef50_A1VMU8 Metallophosphoesterase n=2 Tax=Comamonadaceae RepID=A1VMU8_POLNA Length = 429 Score = 194 bits (493), Expect = 5e-48, Method: Composition-based stats. Identities = 65/341 (19%), Positives = 111/341 (32%), Gaps = 60/341 (17%) Query: 1 MRILHTSDWHLGQNFYSKSREA---------EHQAFLDWLLETAQTHQVDAIIVAGDVFD 51 MR +HT+D H+ SR + L+ L+E A +VD +++AGD++D Sbjct: 1 MRFIHTADLHIDSPLRGLSRYQGAPLERLRSATRRALERLVELAVDEKVDFVLMAGDLYD 60 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA 111 + N +V L+ G + ++ GNHD+ + + R I N V +S Sbjct: 61 RDWQDFHTGLFVNAQLVTLKNAGIQVFIVQGNHDAQSHMT--RQIPWPDNVKVFSSRTAE 118 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 L A I + + Y A Sbjct: 119 TAHLK-------------------------ALGVAIHGHSFPNREVPENLVPGYPPAL-- 151 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG 231 I H + G D + L A DY ALGH+H Q++ Sbjct: 152 ---PGCFNIGLLHTSLTGTDGHDTYAPATLSDLKA------KGYDYWALGHVHARQVVCE 202 Query: 232 MEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLA---- 287 V + G+ E G K LVT G + + + V + ++ D+ Sbjct: 203 APRVVFPGNLQGRHARETG-PKGCELVTVE-GTAITARFVPLDVVR-WHQVEIDMQPVLQ 259 Query: 288 ------SITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQR 322 + L+ + E + + +T L ++ Sbjct: 260 LDDLRRQVVQALQSAVADAGEVLHAMRVVLTGQTPLQALEA 300 >UniRef50_A7NIU3 Nuclease SbcCD, D subunit n=6 Tax=Chloroflexi (class) RepID=A7NIU3_ROSCS Length = 418 Score = 193 bits (491), Expect = 8e-48, Method: Composition-based stats. Identities = 87/401 (21%), Positives = 153/401 (38%), Gaps = 31/401 (7%) Query: 1 MRILHTSDWHLGQNFYSK--------SREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDT 52 MR+LH +D H+G Y + SR ++ LD ++ VDA+++AGDV+ Sbjct: 1 MRLLHLADLHIGIENYGRVDPSTGLHSRLRDYLERLDEAIDVGLAEGVDAVLIAGDVYKN 60 Query: 53 GSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVAS-AGHA 111 +P + + R + L+ G + +L GNHD + + F V Sbjct: 61 RTPNPTQQREFARRIHRLRACGLPVFILIGNHDVSPAAGRAHAVEIFDTLAVDGVTIADR 120 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGL--NGIEKQQHLLAAITDYYQQHYADAC 169 P+I + + + +P++ ++T + + +E + L+ + + +Q D Sbjct: 121 PRIHTLQTRSGPLQVIALPWVTRHALLTKEELRMASFLEIETMLIERVERFLRQAADDL- 179 Query: 170 KLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQN--FPPADYIALGHIHRAQ 227 D LP + T H T GA+ A R + +G +P P DY+A+GHIHR Q Sbjct: 180 ----DPALPAVLTVHGTIDGATF-GAERQVLLGRDLIYPRSLMALPNVDYVAMGHIHRHQ 234 Query: 228 IIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLA 287 +G V Y GS + F E + K +V + +P + D+ Sbjct: 235 ALGDHPPVVYPGSIERIDFGEEDEDKGCVIVDLKAKGEAHWRFHKL-AARPFVTIAVDVR 293 Query: 288 SITAQLEQWRDVSQE---PPVWLDIEITTDEYLHDIQ--RKIQALTESLPVEV---LLVR 339 SI +++ + + ++I D I+ + V + V Sbjct: 294 SINDPMQRVLAAIERRSLRGAVVRVKIDARPEQADALQTEAIRRALDDAGAYVIAAVTVE 353 Query: 340 RSREQRERVLASQQRETLSELSVEEVFNRRLALE--ELDES 378 R R R L + L L+ L + L E Sbjct: 354 VERSTRGR-LGNSDASILDGLTPRRALELYLRQKTPPLSEE 393 >UniRef50_Q110K3 Nuclease SbcCD, D subunit n=3 Tax=Cyanobacteria RepID=Q110K3_TRIEI Length = 427 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 69/416 (16%), Positives = 144/416 (34%), Gaps = 29/416 (6%) Query: 1 MRILHTSDWHLGQNF-YSK--------SREAEHQAFLDWLLETAQTHQVDAIIVAGDVFD 51 ++I+H SD H+G F + + +R + + L ++ A + VD ++ GD F Sbjct: 2 IKIIHLSDIHIGSGFSHGRINPETGLNTRLEDFISSLKLCIDKAISEPVDLVLFGGDAFP 61 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVA-SAGH 110 +P Y + + + L +V+L GNHD + + + + G Sbjct: 62 DATPAPYIKQAFAGEIRRLVDAQIPIVLLVGNHDQHSQGQGGASLGIYRTLGIPGVVVGD 121 Query: 111 APQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYY---QQHYAD 167 + + + +P+L T+ + + E + + + + + + Sbjct: 122 RLETHKIQTQNGYIQIITLPWL------TASSLMTKSETEGKSMGQVNESLIQKLRLILE 175 Query: 168 ACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNF--PPADYIALGHIHR 225 + + + +P + GHL AS A R + +G P P DY+ALGH+H+ Sbjct: 176 SEIRKLNPEIPTVLLGHLMADRASL-GAERFLAVGKGFNIPVSLLNHPYFDYVALGHVHK 234 Query: 226 AQII--GGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLK 283 Q + + Y GS + F E + K LV GK + +PV + +K Sbjct: 235 HQNLNNSNNPPIIYPGSIERVDFSEEKEEKGFVLVELEKGKAI-WKFCALPV-RNFQTIK 292 Query: 284 GDLASITAQLEQWRDVSQE---PPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRR 340 +++ + + + V + + D+ ++ Sbjct: 293 VNVSEVENPQTELLKTISKYQIKNVVVRLIYQLRSEQLDLIDNSILHQALSEAHTYTIQP 352 Query: 341 SREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAG 396 + + T + + + L E + Q+ + L A Sbjct: 353 ELVSQLARPRLPELSTGNSIDPLQALKTYLESREDIQDIQEEMLEAADKLLVDRAD 408 >UniRef50_A6U7V3 Metallophosphoesterase n=9 Tax=Alphaproteobacteria RepID=A6U7V3_SINMW Length = 425 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 73/428 (17%), Positives = 134/428 (31%), Gaps = 65/428 (15%) Query: 2 RILHTSDWHLGQNFYSKSREA---------EHQAFLDWLLETAQTHQVDAIIVAGDVFDT 52 R +HT+D HL S + ++ L +++ VDA+++AGD++D Sbjct: 4 RFVHTADLHLDSPLRSLALRNSELAGLVRSATRSALVRIVDLCVAESVDALLIAGDLYDG 63 Query: 53 GSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP 112 + L + G ++ GNHDS + + R++ + V + Sbjct: 64 SQTSMNTALFLAGELRRLDEAGIRTFIIRGNHDSQSQVT--RELALPPSVHVFSGRSRTV 121 Query: 113 QILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLR 172 +G + + F P + Sbjct: 122 LAKTLANG-RTVHIHGVSFADPHAPESLLPQF--------------------------HP 154 Query: 173 GDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGM 232 I H + G++ D + L DY ALGH+H+ Q+ Sbjct: 155 PVAGGINIGMLHTSLSGSAAHDPYAPCSVADLQR------HGFDYWALGHVHQRQVHCEK 208 Query: 233 EHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNV--PVTQPMAV-------LK 283 ++ G P +E G K V +VTF +++ + + AV Sbjct: 209 PYIVMAGMPQGRDINEAGM-KGVTIVTFDEDGPAALDERPISTAAFERFAVDVSGIADWH 267 Query: 284 GDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEV-------- 335 L +++ L R + L + + L R+ L E V + Sbjct: 268 DMLDAVSRALAHIRKTVAADNLILRLTLKGSTPLAWRLRRDADLLEGEIVNIAAGLGGCW 327 Query: 336 ---LLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLH 392 + + + A L+ L ++V EL+ ++ LQ L Sbjct: 328 IETVELSCRASVKPEQNAVDPVGELAVLIEKDVLPSFGFRTELNGIAKELLQQLPPELRS 387 Query: 393 TLAGEHEA 400 LA + EA Sbjct: 388 LLASDEEA 395 >UniRef50_B9K7R6 Exonuclease n=6 Tax=Thermotogaceae RepID=B9K7R6_THENN Length = 383 Score = 191 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 85/403 (21%), Positives = 141/403 (34%), Gaps = 34/403 (8%) Query: 2 RILHTSDWHLGQNFYS----KSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFD-TGSPP 56 +ILHT+DWH G +S + R AE LD ++E A+ VD +VAGD+ +P Sbjct: 8 KILHTADWHFGLTSWSSSKPRDRRAEINEALDRVIEEARKEGVDLFLVAGDLLHNRSNPG 67 Query: 57 SYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILP 116 A ++ + Q +VVL GNHD + + V ++ Sbjct: 68 VTAMKDVMEYLKKMLQI-APVVVLLGNHDWRGLTAFGDLLQVLSDDLVFLRYPEPVDVVA 126 Query: 117 RRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQP 176 R + P P+ + +E + + ++ A + + Sbjct: 127 GR--GQKVRILPFPYPEESE---------DLEAKISRGRDFRQWLEKKLAKLKEAGKED- 174 Query: 177 LPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPA-DYIALGHIHRAQIIGGMEHV 235 + GH T G + G P DY+ALGH+H ++ + Sbjct: 175 -FAVFVGHFTVEGL---EPYAGAEQGREIVINRNLIPFFADYVALGHLHGFHVVQEQPLM 230 Query: 236 RYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQ 295 Y GSPI L F E K LV G ++ + L T+ + Sbjct: 231 IYSGSPIRLDFGEEKDEKGAVLVVVKKGSEPVFRKIDTNPLPLKTLFYRTLD--TSARRE 288 Query: 296 WRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRE 355 +D + P ++ I D L+ + + V+ V + E+ + RE Sbjct: 289 IKDFCRTFPGYVRITYEED-PLNMAHELLGEI-----DNVVKVEKRIEKVFQSGVDDVRE 342 Query: 356 TLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEH 398 +S+L E+F + D L LF L + G Sbjct: 343 EISKLDFFELFKEYVKTRVKDHEN---LIKLFEELLEEVKGNE 382 >UniRef50_B6IR03 Exonuclease, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6IR03_RHOCS Length = 414 Score = 191 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 72/416 (17%), Positives = 126/416 (30%), Gaps = 65/416 (15%) Query: 2 RILHTSDWHLGQNFYSKSREAEHQA---------FLDWLLETAQTHQVDAIIVAGDVFDT 52 R +H +D HL AEH+A + L++ A +VD ++AGD+FD Sbjct: 3 RFIHAADIHLDSPLAGLCLRAEHRADDFVKAPRRAFERLIDHALRERVDLFLIAGDLFDG 62 Query: 53 GSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP 112 + + L G + ++ GNHD+V+ + R + N + SA Sbjct: 63 DWRDFSTGLFFVSQMARLHGAGIPVGIIKGNHDAVSVVT--RTLNLPPNVHLFGSA---- 116 Query: 113 QILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLR 172 + G + F A+ + Y Sbjct: 117 RPETWEPPGLGVAVHGQSFPN---------------------RAVPENIALDYP-----A 150 Query: 173 GDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGM 232 L I H + G A + L A DY ALGH+H +++ Sbjct: 151 PRPGLLNIGLLHTSLDGRPGHAAYAPCALRDLTA------RGYDYWALGHVHGREVVSQS 204 Query: 233 EHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQ 292 V Y G+ +E G +K LVT + S E + V + A + DL Sbjct: 205 PWVVYPGNLQGRHANETG-AKGFTLVTAEGQTIRSAEAVTADVVR-WARVTADLTGCDTF 262 Query: 293 LEQW----------RDVSQEPPVWLDIEITTDEYLH----DIQRKIQALTESLPVEVLLV 338 + + + + + + ++ H + +A +L V Sbjct: 263 DDACGRIGRGLVTELEAADGRALAVRLTLSGRTAAHRRIAGDLERTRAECAALAERAGDV 322 Query: 339 RRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTL 394 R E + R + + D + L+ L + Sbjct: 323 WIERVVVETAEPGRDG--PPSADAFAELLRTVEAIKADPLEMAELRQDLEQALAKV 376 >UniRef50_Q30V80 Ser/Thr protein phosphatase family protein n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30V80_DESDG Length = 465 Score = 191 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 72/414 (17%), Positives = 125/414 (30%), Gaps = 50/414 (12%) Query: 2 RILHTSDWHLGQNFYSKS--------REAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTG 53 R H +D HL F S A L+ L + D ++VAGD+++ Sbjct: 25 RFFHAADLHLDTPFKGLSGTPHMATTLHAATFTALERLTSLCIARRADFLLVAGDIYNHE 84 Query: 54 SPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ 113 A+ L G + ++ GNHD + + N + + Sbjct: 85 EGSLKAQFALRDACEKLHAAGIGVFIVHGNHDFAG--SRITRMQWPPNVVIFGTDNVETV 142 Query: 114 ILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRG 173 + R G A++ I + + L Sbjct: 143 PVV-RSGKEVALIHGISHAARNERSNMARRFTRDTSRADL-------------------- 181 Query: 174 DQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGME 233 P I H T + +D L A DY ALGH+H Q + Sbjct: 182 ----PQIGLLHCTVASVAAADRYAPCTAEDLKA------AGMDYWALGHVHERQTVLQTP 231 Query: 234 HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNV-PVTQPMAVLKGDLASITAQ 292 Y G+ L +E G + + VT++ S+ + PV + D + Sbjct: 232 LSVYPGNIQGLHINETG-PRGCYEVTYAPEDGFSLRFHRLGPVVWERLNVSIDTPATLDA 290 Query: 293 LEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQR---ERVL 349 LE+ + DE + ++A L +E + L Sbjct: 291 LEEEIHRRIAACCNAVQKAPQDEESGSTEPPVEAWMLRLTLEGRGPLNQPLRAAGGHEEL 350 Query: 350 ASQQRETLSELSVEEVFNRRLALEELDESQQQRLQH---LFTTTLHTLAGEHEA 400 + R ++ S V+ + + L E+ + L+ L TL + +A Sbjct: 351 TERLRTAWADASPT-VWIKDIDLRCRPEADMEALRSGDNLLGETLRLVQQARDA 403 >UniRef50_UPI0001693BED phosphoesterase n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001693BED Length = 436 Score = 190 bits (483), Expect = 6e-47, Method: Composition-based stats. Identities = 62/363 (17%), Positives = 124/363 (34%), Gaps = 52/363 (14%) Query: 3 ILHTSDWHLGQNFYSKSRE---------AEHQAFLDWLLETAQTHQVDAIIVAGDVFDTG 53 +H +D HL F S A L+ L+ A + D ++++GD++D Sbjct: 9 FIHAADLHLDSPFKGMSGLPGAVRERIKESTFAALERLVHAAFREKADFVVISGDIYDAA 68 Query: 54 SPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ 113 A+ + + V L + G + ++ GNHD + + V + Sbjct: 69 DRSLRAQLRFQKAVSRLAEAGIGVYLIHGNHDPMN--GGRASLDWPDKVHVFPADRVESV 126 Query: 114 ILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRG 173 + R+ A + + F A++T+ ++Y G Sbjct: 127 EVTTRERGIIAEVHGMSFAS---------------------ASVTENLARYY-----RAG 160 Query: 174 DQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGME 233 + IA H G D L Y ALGHIH ++ Sbjct: 161 RPDVYQIALLHTNVDGDPSHDNYAPCTRQQLIQ------SGMHYWALGHIHTRAVLHEEP 214 Query: 234 HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQL 293 ++ Y G+ S ECG + ++V ++ + + + + K + + + Sbjct: 215 YIVYPGNIQGRSIKECG-PRGCYVVRVGEDGGTDLDFIELNDIR-WELCKVSIEQLQTE- 271 Query: 294 EQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQ 353 ++ +D+ +E L E + + ++ + E L +R S E V ++ Sbjct: 272 QELKDLIEEELERLLGEAGGKDVI------VRFILEGRGPLHLKLRDSHVLDELVQELRE 325 Query: 354 RET 356 +T Sbjct: 326 EQT 328 >UniRef50_Q2NFC6 DNA double-strand break repair protein Mre11 n=1 Tax=Methanosphaera stadtmanae DSM 3091 RepID=Q2NFC6_METST Length = 393 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 64/400 (16%), Positives = 135/400 (33%), Gaps = 49/400 (12%) Query: 1 MRILHTSDWHLGQNFYSK-SREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYA 59 ++I H +D HLG Y RE + + +++ + VD ++ AGD+F+ PP A Sbjct: 3 IKIAHMADTHLGYKQYGLNERENDFYKTFEKIIDDIISKDVDYVLHAGDLFEHPKPPIKA 62 Query: 60 RTLYNRFVVNLQQTGCHLVVLAGNHDSVATL--NESRDIMAFLNTTVVASAGHAPQILPR 117 + + L + + V+AGNHDS+ + +++ N ++ + + Sbjct: 63 LLVAQKGFEKLLENNIPIFVIAGNHDSIQRKNTSIPQELYKNENFHIINHKNYNFTL--- 119 Query: 118 RDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPL 177 L G+E + + + +A K R Sbjct: 120 ---------------------DEDIFLVGLEYFNRSYEGVEPFLKNTLDEAKKHR----- 153 Query: 178 PIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRA-QIIGGMEHVR 236 + H + + ++ DY A+GH+H + Sbjct: 154 IKLLMLHGSVSKYFDFEPEFEL---------KTIPEGYDYYAMGHLHGRINDKFKGGILS 204 Query: 237 YCGSPIPLSFDE----CGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQ 292 Y GS + E K +LVT + VE +N+P+ + + + + Sbjct: 205 YPGSTEIRTKSEIPNYQKNGKGYNLVTIGDDNKIDVEFINIPLERKFIIKSIEYPKLDET 264 Query: 293 LEQWRD--VSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLA 350 L + + S + + +T + Q + + L +VL +R E + + Sbjct: 265 LNKLSEKLESMDSSKKPVVYLTIKNGNFERSEVAQQIYDKLEEKVLTLRIKYEPTQVIEN 324 Query: 351 SQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTT 390 + ++ E + ++ + +E L+ Sbjct: 325 LPETIDKENITPENIIKEKIEDQ-FNEDVASLAVELYKNL 363 >UniRef50_C1P8K4 Metallophosphoesterase n=1 Tax=Bacillus coagulans 36D1 RepID=C1P8K4_BACCO Length = 409 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 65/409 (15%), Positives = 124/409 (30%), Gaps = 62/409 (15%) Query: 1 MRILHTSDWHLGQNFYSKSRE---------AEHQAFLDWLLETAQTHQVDAIIVAGDVFD 51 +R +H +D HL F + L + + D +++ GD++D Sbjct: 4 IRFVHAADLHLDSPFAGLRKLPPALFERVKESTFRAFKNLCDLTIEKEADFLLICGDLYD 63 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA 111 A+ + LQ+ G + VL GNHD ++ + N + + Sbjct: 64 GEDRSLKAQVRLKKQFERLQEAGISVFVLHGNHDHLS--GSWTKLDMPANVRIFS--ERV 119 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 + + + + ++ D + Sbjct: 120 EAKSFTAKNGSKVHVYGFSYPK-------------------------RHVLENKTDEYRK 154 Query: 172 RGDQPLPIIATGHLTTVGA-SKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIG 230 GD I H G + L DY ALGHIH+ QI+ Sbjct: 155 TGDAD-FHIGMLHGYLEGGTKMHQPYAPFALQDL------LEKGMDYWALGHIHKQQILH 207 Query: 231 GMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKG----DL 286 ++ Y G+ + E G K + + + + D Sbjct: 208 THPYIIYPGNIQGRNRKETG-PKGCMVTEMDPLGTHTAFYETADILWEKRTVSVKGANDF 266 Query: 287 ASITAQLEQWRDVSQEP--PVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQ 344 + + ++ V+L ++I + L D +AL + E++ V + E+ Sbjct: 267 NRLYTVCRNALEEERKEAQGVFLQLDIKDPDLLDD-----EALGKVKNGELMEVLQEGEE 321 Query: 345 RERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHT 393 +R R TL E+ F + + ++ L L TT+ Sbjct: 322 ADRNFVWVHRITL----PEDAFISARDDGFILQEMKKTLAQLEETTVDE 366 >UniRef50_C6I002 Metallophosphoesterase n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6I002_9BACT Length = 416 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 82/409 (20%), Positives = 145/409 (35%), Gaps = 55/409 (13%) Query: 1 MRILHTSDWHLGQNFYSKSR---------EAEHQAFLDWLLETAQTHQVDAIIVAGDVFD 51 M+ LH +D HL + + + L++ A + V +++AGD++D Sbjct: 1 MKFLHAADIHLDSPLRNLALSNTEATDRIRRASRDAFTRLVDLALSEGVSLLVLAGDLYD 60 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA 111 +P R + L + G + V+ GNHD+ + + NT + +S A Sbjct: 61 HDTPNMQIALFLRRELSRLAEAGISVAVVLGNHDAGNRMTTLLSL--PENTRIFSS--RA 116 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 P+ L + Q + D + + K Sbjct: 117 PETLILEECGVAV-----------------------TGQSLREGPVNDNLARDFPAPRK- 152 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG 231 IA H + G+ D + L + DY ALGHIH+ +I+ Sbjct: 153 ----GYFNIALLHTSLGGSPDHDVYAPCSLADLSS------RAYDYWALGHIHKGEIVSR 202 Query: 232 MEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITA 291 +V Y G+ E G K LV +GK+ S + + + V + L+ DL Sbjct: 203 DPYVVYPGNLQGRHARETG-PKGAVLVEVRDGKVVSCDLVPLDVVR-WHQLEVDL----G 256 Query: 292 QLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLAS 351 E R+ L + + R I L+ P+ +R S QR+ V + Sbjct: 257 GAETLREAGDRIRGVLSETLRQSGERPAVVRVI--LSGRTPLASGPLRGSGAQRDLVAET 314 Query: 352 QQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHEA 400 E+ VE+V R + +E + +++ F + + L + A Sbjct: 315 AGELLSGEIWVEKVVGRLVPPKEEESAEKGETGEEFFSIVSELMADERA 363 >UniRef50_C0WU80 DNA repair exonuclease n=3 Tax=Lactobacillus RepID=C0WU80_LACBU Length = 407 Score = 189 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 59/359 (16%), Positives = 114/359 (31%), Gaps = 49/359 (13%) Query: 1 MRILHTSDWHLGQNFYSK-----------SREAEHQAFLDWLLETAQTHQVDAIIVAGDV 49 M+ +H +D HL F + ++ A VD +++ GD+ Sbjct: 1 MKFIHAADLHLDSPFLGLQNHTIPRDLWDKIRNSTFTSFERIVNDAIEQNVDFVLLVGDL 60 Query: 50 FDTGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAG 109 FD +A T + + L +++ GNHD + + NT V ++ Sbjct: 61 FDRNDHSVHAETFLVQQLNRLNDHQIPVLISFGNHDYFS--GRVNQLGYPENTYVFSN-K 117 Query: 110 HAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADAC 169 A L +DG + F I D Q Y A Sbjct: 118 VATTTLLLKDGQR-VAISGFSFGS---------------------QWIKDPIIQDYPQAS 155 Query: 170 KLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQII 229 I H + A+ + + L+ DY ALGHIH+ Q + Sbjct: 156 DA-----DWNIGMLHGSL--ATLNSPEANYAPFNLNQL---QEKGYDYWALGHIHKRQSL 205 Query: 230 GGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASI 289 + + Y G+ +E G K +V + L+ P+ ++ + S+ Sbjct: 206 NPQKTINYSGNTQGRHINESG-EKGYLMVEAAQHVLKPKFVATAPIIWQTIQIEFNGESV 264 Query: 290 TAQLEQWRDVSQEPPVW--LDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRE 346 E + + + D ++ ++A+ + + L ++ ++ Sbjct: 265 GELPETIFSHLASLNFYKLSFLRVVLDSHITIPSDILKAIFDGTFLTALQNLNTQNWQQ 323 >UniRef50_O07522 Uncharacterized metallophosphoesterase yhaO n=5 Tax=Bacillus RepID=YHAO_BACSU Length = 408 Score = 188 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 74/402 (18%), Positives = 127/402 (31%), Gaps = 56/402 (13%) Query: 3 ILHTSDWHLGQNFYSKSREAE---------HQAFLDWLLETAQTHQVDAIIVAGDVFDTG 53 +H +D HL FY S E A + +++ A VD I++AGD+FD Sbjct: 7 FIHAADLHLDSPFYGISHLPEPIFARIKESTFASVRHMIDAAVREHVDFILLAGDLFDEA 66 Query: 54 SPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ 113 + A+ + L++ G + V+ GNHD + E I N + +S + Sbjct: 67 NRSLKAQLFLKKQFERLRECGISVYVIFGNHDHLG--GEWTPIEWPENVHIFSS-AVPEE 123 Query: 114 ILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRG 173 ++G A + + ++ A + Sbjct: 124 KSFFKEGRRIASIYGFSY-------------------------QARALMENQAARYRRST 158 Query: 174 DQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIG-GM 232 D P I H T G+ D L DY ALGHIH+ Q++ Sbjct: 159 DAP-FHIGMLHGTLSGSEGHDPYCPFTHDDL------VKSGMDYWALGHIHKRQVLSAEH 211 Query: 233 EHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQ 292 V Y G+ E G K +LV +NG + V A + A Sbjct: 212 PAVIYPGNTQARHIKETG-DKGYYLVHVTNGDISYEFQRAHDVLWEKAAVDVTEAKNMTA 270 Query: 293 LEQWRDVS------QEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRE 346 L Q + + + PV + + + ++ L E L Sbjct: 271 LFQMVEDTFSKLRKKGSPVCVRLVLQGTAPEWLLEAPKGTLDEFLEALQEQEAEEERFVW 330 Query: 347 RVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFT 388 + + E + L+ + F ++ + L + Sbjct: 331 PLRLDDETENEANLTNLDPFF----GGLFEDIDRSDLSDVLE 368 >UniRef50_B9KXS7 Putative nuclease SbcCD, D subunit subfamily n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KXS7_THERP Length = 419 Score = 188 bits (476), Expect = 5e-46, Method: Composition-based stats. Identities = 79/417 (18%), Positives = 145/417 (34%), Gaps = 28/417 (6%) Query: 2 RILHTSDWHLGQNFYSK--------SREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTG 53 R++H +D HLG + + SR + D +++ A + DA++ AGD F Sbjct: 3 RLIHFADLHLGVETHGQFRPDLGHSSRIQDFLDAFDQIIDAAIEERFDAVLFAGDAFKHA 62 Query: 54 SPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASA-GHAP 112 P + + + L G +V+L GNHD ++ S I + + + P Sbjct: 63 EPSPTLQRRFAERIQRLLAAGIPIVLLVGNHDRPRSVVRSTPIDIYAALRLPGVIVANRP 122 Query: 113 QILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLR 172 + + + +P++ PR ++ A + L Sbjct: 123 ERFTIATPSGPLQVVALPWIPPRLLLADDALREAGTPE---LERRYKEVIASALAPLLAA 179 Query: 173 GDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNF----PPADYIALGHIHRAQI 228 D P + GHL+ G + R + +G F P DY+ALGH+H Q+ Sbjct: 180 LDAATPAVFLGHLSMEGGRF-GSERSVILGNDPLFGLDELGLNSAPIDYVALGHLHSHQV 238 Query: 229 IGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNG---KLESVENLNVPVTQPMAVLKGD 285 + V Y GS + F E + K V + G + S E + T+PM + D Sbjct: 239 LHERPPVVYAGSVERIDFGEEREDKGYVAVRIAAGPYPRDVSWEFRPL-RTRPMRTFRLD 297 Query: 286 ------LASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVR 339 + I LE+ + E V + I T + +++ L + Sbjct: 298 ILTDTPMDEIRRALERHATLIPEAIVRVTITTTPERAAAIRPLEVRRWLSELGAAHV-AG 356 Query: 340 RSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAG 396 + + + E S + R + L L + + + + + Sbjct: 357 ITVQTERVARPRVELERSSRHDPVSLLERWVNLHRLSDQLAKAVIQRGREIIERVES 413 >UniRef50_Q03QD8 DNA repair exonuclease n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03QD8_LACBA Length = 404 Score = 187 bits (475), Expect = 5e-46, Method: Composition-based stats. Identities = 71/411 (17%), Positives = 119/411 (28%), Gaps = 61/411 (14%) Query: 1 MRILHTSDWHLGQNFYSKS---------REAEHQAFLDWLLETAQTHQVDAIIVAGDVFD 51 M+ +H +D HL F + A + + + A + VD +++AGD+FD Sbjct: 1 MKFIHAADLHLDSPFLGLTNLPNSLLTVIRQSTFAAVTKVFDRAISEHVDFVVLAGDLFD 60 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA 111 A+ L+ + V+ GNHD +A ++ + I N V Sbjct: 61 RSEQSVAAQAYLFEQFDRLRLANIPVFVIFGNHDFLA--DQHQPIAYPENVHVFG--ATV 116 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 L + + + A Sbjct: 117 ETKTLTTAAGETVALSGFSY--------------------------PQRWVEANPLAAFP 150 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG 231 + H S+ D L DY ALGHIH+ QI+ Sbjct: 151 NRAATDWHLGLLHGAIKSGSQ-DHYAPFTRADL------LSKRYDYWALGHIHQHQILNT 203 Query: 232 MEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQP----MAVLKGDLA 287 V Y G+ S +E G +K +LV L + M DL Sbjct: 204 QPPVVYAGNTQGRSINETG-AKGAYLVESDGTALVPHFFETTVIGWDIPEVMTTSAADLP 262 Query: 288 SITAQL-EQWRDVSQEPPVWLDIEITTDEY----LHDIQRKIQALTESLPVEVLLVRRSR 342 ++ L + + P + I + LHD++ AL + +L + Sbjct: 263 AVGQALTQWVTTHATTLPTLTALSIQAPQLVPTDLHDLETDWLALYQRTHARLLKEHQRY 322 Query: 343 EQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHT 393 R V + T +L + + L+ LF Sbjct: 323 FIRLNVALPESTLTAPQLD-----QQYWEAGAATVFTPENLRDLFGKLAQE 368 >UniRef50_A5UJE8 DNA repair exonuclease (SbcD/Mre11-family), Rad32 n=3 Tax=Methanobrevibacter smithii RepID=A5UJE8_METS3 Length = 407 Score = 187 bits (475), Expect = 6e-46, Method: Composition-based stats. Identities = 67/425 (15%), Positives = 138/425 (32%), Gaps = 68/425 (16%) Query: 1 MRILHTSDWHLGQNFYSK-SREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYA 59 M+ H +D HLG + RE + D +++ +VD +I +GD+FD+ P A Sbjct: 1 MKFAHLADTHLGYRQFGLLEREKDFYEVFDKIIDKIIEEKVDFVIHSGDLFDSARPSPSA 60 Query: 60 RTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRD--IMAFLNTTVVASAGHAPQILPR 117 + + ++ L+ G + +AGNHD V + +++ + Sbjct: 61 LLAFQKGLLKLKGAGIPMYAIAGNHDIVNRNGAIPPQVLFKKFGLKLIS-------PINT 113 Query: 118 RDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPL 177 + +PF A+ + + K + Sbjct: 114 NYMHDDVFIAGLPF---------------------YPASQNKNLKSKLDELSKKAENHEK 152 Query: 178 PIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIG--GMEHV 235 I H +I DY ALGHIH I G + Sbjct: 153 -SILVLHQGIDKYFNLQYELEI---------GDIPDNFDYYALGHIHN-YICDDFGNGKL 201 Query: 236 RYCGSPIPLSFDE----CGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITA 291 Y GS + E K +V G +V+ + + + + V D ++ A Sbjct: 202 VYPGSTETWNVSELIDLKKNGKGFIVVDLD-GPKMNVKRVAMDIPREFIVKTIDYRNLGA 260 Query: 292 QLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLAS 351 +++ ++ ++ + + + ++ + + L L++R + +R + Sbjct: 261 EIDSIKNTIKDFDKRPILNLKINNIDSNLGEIYEFINRELGDLALMIRPTFNVLDREVDV 320 Query: 352 QQ--------------RETLSELSVEEVFNRRLALEEL-----DESQQQRLQHLFTTTLH 392 + L E E+V N + L +L E + ++ F + Sbjct: 321 DAIINDENALRPKELLIDELKEYDSEDVNNLAVELYDLLSKNKTEESEDLIRQFFNEKYN 380 Query: 393 TLAGE 397 + + Sbjct: 381 IIRDD 385 >UniRef50_Q5FS56 Putative exonuclease n=1 Tax=Gluconobacter oxydans RepID=Q5FS56_GLUOX Length = 412 Score = 187 bits (474), Expect = 7e-46, Method: Composition-based stats. Identities = 87/414 (21%), Positives = 134/414 (32%), Gaps = 60/414 (14%) Query: 2 RILHTSDWHLGQNFYSKSREA---------EHQAFLDWLLETAQTHQVDAIIVAGDVFDT 52 R LH +D HL SR + LD ++ETA T +VD +++AGD++D Sbjct: 5 RFLHAADIHLDSPLRGLSRYEGLPEAEIRGSTRRALDRMVETALTEKVDFVVLAGDLYDG 64 Query: 53 GSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP 112 R + L Q G +V L+GNHD+ + + R++ + Sbjct: 65 TWQDVGTGLYMVRALSRLVQVGIRVVTLSGNHDAQSVIA--RELPLPDGIDHFSYDA--- 119 Query: 113 QILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLR 172 G L F +T + Y Sbjct: 120 -PQTLHWPELGVALHGQSFRDRH---------------------VTQDMTRAYPAPVA-- 155 Query: 173 GDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGM 232 I H + G + + + TL A DY ALGH+H +I+ Sbjct: 156 ---GCFNIGVLHTSLSGYGEHETYAPCSVETLSA------KGYDYWALGHVHAREIVCEH 206 Query: 233 EHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQP---------MAVLK 283 + + G E G LVT +G + SVE + V + M + Sbjct: 207 PWIVFPGVLQGRHARETGAC-GCELVTVEDGIVRSVEFVECDVVRWARLELDVSGMQTMD 265 Query: 284 GDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESL-PVEVLLVRRSR 342 L + +E + V I +T LHD QA E L + V + + + Sbjct: 266 AVLGAARQAMENALSDAGGRTVIARIVLTGRSVLHDRLCASQAWKEDLRGIAVSMAQGTA 325 Query: 343 EQRERVLASQQRETLSELSVEEVFNRRLALEEL--DESQQQRLQHLFTTTLHTL 394 + + ++ V E LALE L DE L F L Sbjct: 326 QIALEKIRNETSAPAHRAGVAETRELDLALEGLMQDEDFLASLPEAFEGFFSAL 379 >UniRef50_C1ZLA0 DNA repair exonuclease n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZLA0_PLALI Length = 449 Score = 187 bits (474), Expect = 7e-46, Method: Composition-based stats. Identities = 69/413 (16%), Positives = 129/413 (31%), Gaps = 62/413 (15%) Query: 3 ILHTSDWHLGQNFYSKSR---------EAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTG 53 LH +D HL SR + + L+ L++ A +V A+++AGD++D Sbjct: 4 FLHVADLHLDSPRSGLSRDASAPVSEIQQAPRRALERLIDEALRRKVSAVVIAGDLYDGD 63 Query: 54 SPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ 113 + R L +V++ GNHD+ + + + + N V++ AP+ Sbjct: 64 WKDHQTGLFFVRQAQKLADARIPVVMITGNHDAQSVITQQLPL--PPNVKVLSV--DAPE 119 Query: 114 ILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRG 173 D + Q A+ +Y Sbjct: 120 TFLLEDCGL-----------------------ALHGQGFKNRAVPQNLSANYPAKI---- 152 Query: 174 DQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQI--IGG 231 L I H + G + + L +Y ALGHIH+ Q + Sbjct: 153 -NSLLNIGLLHTSLTGFEGHEVYAPCSLSDL------ARTGYEYWALGHIHKRQEFPLAS 205 Query: 232 MEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITA 291 + G+ ECG K ++ + + E++ + V + +L + +++ Sbjct: 206 GGMAVFPGNLQGRHIRECG-PKGCEIIEYQPNGILQRESIVLDVFR-WELLSISVDGLSS 263 Query: 292 QLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLAS 351 + E + + L + L+ R RE R + + Sbjct: 264 RDEILALIEDHLRAF------RTSADPQPHALRIELMGATTCHGQLIDRQRELRAEIQSL 317 Query: 352 QQRET-----LSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHE 399 + L +LS+ F L + Q L L + L E Sbjct: 318 VVQSGSGNWWLEDLSLRTTFPEASIDAALTSAASQELLALARSELQAAHSSPE 370 >UniRef50_A5VL00 Metallophosphoesterase n=7 Tax=Lactobacillus reuteri RepID=A5VL00_LACRD Length = 394 Score = 186 bits (473), Expect = 9e-46, Method: Composition-based stats. Identities = 68/402 (16%), Positives = 123/402 (30%), Gaps = 57/402 (14%) Query: 1 MRILHTSDWHLGQNFYSKS---------REAEHQAFLDWLLETAQTHQVDAIIVAGDVFD 51 MR +HT+D HL F + + +++ A +VD I+++GD++D Sbjct: 1 MRFIHTADLHLDSPFLGLTSMPKPLWERVHSSTFTAFQKIVDDAIALKVDFILISGDIYD 60 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA 111 A + + L Q + +L GNHD + N + + Sbjct: 61 RDQQSIAATDFFIKQCERLNQAHIPVYLLYGNHDYQIVQDTG---ELPANVHIFGN--RV 115 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 + + I + Q Y Sbjct: 116 TTTTLTLANHDSVAISGFSY---------------------DQRWIQEDQVQKYP----- 149 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG 231 I H + + L A DY ALGHIH+ Q + Sbjct: 150 SKRNETWHIGMLHGAVR-QRQDNHYAPFTTDELIA------KNYDYWALGHIHKHQFLNE 202 Query: 232 MEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKG----DLA 287 + Y G+P +E G+ +LV KL + + +LA Sbjct: 203 KPPIVYSGNPQGRHKNEAGQ-HGYYLVESQGNKLVPQFKPIAEIEWISLTVNALSTSNLA 261 Query: 288 SITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRE- 346 + L Q D + + +E+T + + I+ L + V L ++ + + Sbjct: 262 EVERSLSQAIDGKLKNSPFQLVELTIAN-IEQLSPTIRHLLANGDVLEHLQDQNADNGKW 320 Query: 347 ---RVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQH 385 +L QQ S ++E + ++ A E + L Sbjct: 321 WIYDLLLHQQNLLPSMTDLDEQYWQQAAQEVFTPANIAELTK 362 >UniRef50_D2LYR1 Metallophosphoesterase n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LYR1_BACS4 Length = 408 Score = 186 bits (473), Expect = 9e-46, Method: Composition-based stats. Identities = 71/441 (16%), Positives = 141/441 (31%), Gaps = 80/441 (18%) Query: 1 MRILHTSDWHLGQNFYS---------KSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFD 51 +R +H +D HLG+ + K ++ + ++ A VD ++++GDV+D Sbjct: 2 IRFIHCADLHLGRPIKTHADLPASFIKQLQSATYQSFESIVNKAIEFNVDFMLISGDVYD 61 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA 111 + + + LQ+ + V+ GNHD + + + + N V + Sbjct: 62 SEHRSYRGQWFLKKQAERLQKVNIPIYVIHGNHDPIKAEHSNNRL--PENVHVFSEKFEV 119 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 +L ++ L + Y + + Sbjct: 120 VSLLTAKNE--KVYLYGFSYPNK-------------------------AYYDNPIPMYET 152 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG 231 G+ IA H + + L DY ALGHIH+ QI+ Sbjct: 153 IGEMSAYHIALLHGQESSQKDHEPYAPFSLNELKQ------KNIDYWALGHIHKRQILSS 206 Query: 232 MEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGD----LA 287 V Y G+ E G K + V + V + D + Sbjct: 207 NPSVVYPGNIQGAHKKENG-EKGAYYVEMTKTDTMLTFLPTSRVQWEHMNISIDECEIMD 265 Query: 288 SITAQLEQWRDVSQEPPVW-LDIEITTDEYLHDIQRK----------------------I 324 + +++Q ++ + +++ +T LH+ + I Sbjct: 266 ELLDRIQQISEILDLQKHYLVEVHLTGGGPLHEQLIQDNVQQELMTILRSEVFHSSNVWI 325 Query: 325 QALTESLPVEVLLVRRSREQRERVLASQQRETLSELSVEE----VFNRRLALEELD---- 376 +L + + + R + + +TL E VEE VF+ + + L+ Sbjct: 326 NSLYVNTTLPIERERLKEKDDLLGDIVRVVDTLEEQHVEEALQPVFSHLVMRKYLECLSQ 385 Query: 377 ESQQQRLQHLFTTTLHTLAGE 397 E Q+ ++ L +L E Sbjct: 386 EEIQEIVETAERKILTSLMRE 406 >UniRef50_Q2B178 DNA repair exonuclease family protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B178_9BACI Length = 406 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 62/417 (14%), Positives = 125/417 (29%), Gaps = 57/417 (13%) Query: 1 MR---ILHTSDWHLGQNFYSKSREAE---------HQAFLDWLLETAQTHQVDAIIVAGD 48 M+ +H +D HL S + A L +++ A +VD +I+AGD Sbjct: 1 MKEITFIHAADLHLDSPMLGLSSLQDDLFDKIKESTFAALKNIVDAALARKVDFVILAGD 60 Query: 49 VFDTGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASA 108 +FD A+ + + L + + + GNHD I N + Sbjct: 61 LFDGEDRSIKAQARLRKEMNRLAEKNIPVYAVHGNHDHFE--GTWSHISLPDNVHIFPHQ 118 Query: 109 GHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADA 168 L + R ++ Q+ + ++D Sbjct: 119 PSEES--YTAPNGTTVSLHGFSYPRRH--------VSERMISQYPVRGMSD--------- 159 Query: 169 CKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQI 228 I H + G + + L DY ALGHIH+ + Sbjct: 160 ---------FHIGILHGSLEGETGHGRYAPFILKEL------LDKEYDYWALGHIHKRMV 204 Query: 229 IGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGD--- 285 + V Y G+ S E G +K + VT + + + Sbjct: 205 LNAEPPVIYPGNTQGRSRKESG-AKGCYHVTLNEAGADFEFLQCHSFRWEQRTVDISGLS 263 Query: 286 -LASITAQ-LEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSRE 343 + ++ L+ + + V L++ + + ++ V Sbjct: 264 AFDEVYSRCLQAVEEERKNGGVILELFLEGASLSPQDMNAVAGGELLSLLQEEEVGNMPF 323 Query: 344 QRERVLASQQRETLSELSVEE---VFNRRLALEELDESQQQRLQHLFTTTLHTLAGE 397 + ++++++ + E F+ A + E ++ L L++ L E Sbjct: 324 VWVSAVIAEEQQSWDRNQLREKADFFSGLFAAADGFEDFEESLGSLYSHPLARRYAE 380 >UniRef50_A8U9K7 Putative uncharacterized protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8U9K7_9LACT Length = 414 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 73/418 (17%), Positives = 140/418 (33%), Gaps = 77/418 (18%) Query: 1 MRILHTSDWHLGQNFYSKSREAE---------HQAFLDWLLETAQTHQVDAIIVAGDVFD 51 ++ +H +D HL F + + L +++ A + VD + + GD++D Sbjct: 2 VKFIHAADLHLDSPFIGLKNLPDYIWSAIYLSTFSALTKIVDRAIQNNVDFVCLVGDIYD 61 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA 111 A+ + L + + +L GNHD + N + N + Sbjct: 62 NDERSVKAQAYLRNEMERLNKFNIPVYLLHGNHDYIE--NTGLHLDMPENVILF--DETV 117 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 L + +K+ L IT+Y +++ Sbjct: 118 ETKWLTTKENEQIALTGFSY----------------DKRWVLERKITNYPERN------- 154 Query: 172 RGDQPLPIIATGHLTTVGAS-KSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIG 230 + I H + G + + L + DY ALGHIH+ Q + Sbjct: 155 --PRATYHIGMLHGFSEGLESEHGHYAPFTMAELRS------KKYDYWALGHIHKRQHLA 206 Query: 231 GMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKG----DL 286 + Y G+ S E G K LVT + + + + L +L Sbjct: 207 ENPPIVYPGNTQGRSSKESG-DKGFELVTITESGVTTEFCSTAVIQWKTIELSVKEMKNL 265 Query: 287 ASITAQLEQWRDVSQEP--PVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQ 344 ++ L+ + Q ++L I +T +E+L D I+ + + VE L Sbjct: 266 DTVYKALKTAIEEQQNESYSLFLSIRLTDNEHLLD--GVIKKIKQGELVEAL-------- 315 Query: 345 RERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLF----TTTLHTLAGEH 398 + + + V+ ++ L+ + E+ +Q LF T LH + E+ Sbjct: 316 ----------QQIPKTDTF-VWVHKIELQTVAENHIPAIQKLFPNEWTKILHEIEMEN 362 >UniRef50_B2V861 Metallophosphoesterase n=3 Tax=Sulfurihydrogenibium RepID=B2V861_SULSY Length = 382 Score = 186 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 75/411 (18%), Positives = 133/411 (32%), Gaps = 52/411 (12%) Query: 1 MRILHTSDWHLGQNFYS-KSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYA 59 MR LH SD HLG Y+ K RE ++ ++ A VD II GD F + P + + Sbjct: 1 MRFLHISDTHLGYQQYNLKERERDYFDVFQEAIDKAIEKNVDFIIHTGDFFHSSRPSNES 60 Query: 60 RTLYNRFVVNLQQTGCHLVVLAGNHD--SVATLNESRDIMAFLNTTVVASAGHAPQILPR 117 + L+ + V+ GNHD S + +I++ ++ Sbjct: 61 ILDGLYLIKKLKDHKIPMFVIPGNHDRGSGTRDRNALEILSEFGLRLLN---------TD 111 Query: 118 RDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPL 177 G + + ++ P + + D + D+ Sbjct: 112 FIEYNGVNIFGLKYISPIHFKRNI------------------VLKDILYDLYEKATDKNN 153 Query: 178 PIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQI-IGGMEHV- 235 I HL S ++ I DY+ +GH H+ Q I Sbjct: 154 FNILMLHLEFAPVFNSSELQTIS---------DIPFEYDYVGIGHYHQRQEPIKEEGRYV 204 Query: 236 RYCGSPIPLSFDECGK-SKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLE 294 Y GS F+E K +LV +E +E + + + D + I LE Sbjct: 205 VYPGSTEYTQFNEKSYVEKGCYLVEVGGKNIEKIEFVPL-NARKFLSYSIDYSEIDKFLE 263 Query: 295 QWRDVSQ----EPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLA 350 L + I T E + + +++L E L ++ Q ++ Sbjct: 264 DMEKDLNSLNLNKKPILSLNINTQENISNKDILRILESKNLIKEFLHIKIFVNQNKKDTL 323 Query: 351 SQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFT--TTLHTLAGEHE 399 + +E +L DE + +L+ +F + + E Sbjct: 324 DDTTSSNTESFSA---VEKLKEVVDDEELRIKLEEIFKMAESYENVKDLEE 371 >UniRef50_B8FC84 Metallophosphoesterase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FC84_DESAA Length = 423 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 66/419 (15%), Positives = 127/419 (30%), Gaps = 64/419 (15%) Query: 3 ILHTSDWHLGQNFYSKS---------REAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTG 53 +H +D HL F + L++ Q +++AGDVFD Sbjct: 6 FVHAADIHLDSPFAGVAASAPHIRDAMIQASFDAWRNLVDFCIEEQAAFLLLAGDVFDWE 65 Query: 54 SPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ 113 A+ + + L G + + GNHD + I N + S Sbjct: 66 DRSIRAQLAFRDGCMRLAGHGIGVYAVHGNHDPLQ--GRYAAIELPENVKIFGS-ARVES 122 Query: 114 ILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRG 173 + G P A + I + + A Sbjct: 123 CIAELQGAPIAAISGISYQAKEEKRNLAAMFAS------------------------HAI 158 Query: 174 DQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGME 233 + + I H ++ + L DY ALGH+H+ +I G Sbjct: 159 PEGVFSIGLIHANLGSSTGHAPYAPCSMKDLS------LDSVDYWALGHVHQKRIAGEEP 212 Query: 234 HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPM---------AVLKG 284 H+ Y G+ SF E G + +LV +G + S++ + + + L Sbjct: 213 HIVYPGNIQGRSFTEQG-ERGAYLVRVRDGAVASLDFKPLDAVRFLAIDASIGAHRTLDS 271 Query: 285 DLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHD-------IQRKIQALTESLPVEVLL 337 L + L Q + + P+ ++ L + + ++++ E+ Sbjct: 272 LLQDMIDALYQAAEDNPTLPLICRFVLSGRGALFHELIEPEAVDQLVESIRETFLDRDPF 331 Query: 338 VRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQ-----QQRLQHLFTTTL 391 V + + + E + + + +A E ++ L+ LF L Sbjct: 332 VWVEKIRCQCRPEKDLSELMDSDDLLARVLKDMAGMESSPEDLLEFGRESLKPLFGRRL 390 >UniRef50_Q2RUX3 Metallophosphoesterase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RUX3_RHORT Length = 411 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 67/413 (16%), Positives = 124/413 (30%), Gaps = 59/413 (14%) Query: 1 MRILHTSDWHLGQNFYSK---------SREAEHQAFLDWLLETAQTHQVDAIIVAGDVFD 51 MRILH +D HL + +++ A VD +++AGD++D Sbjct: 1 MRILHAADIHLDSPLSGLIARAGGQVGDLTTATRRAFTAMIDYALEAGVDLVLIAGDLYD 60 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA 111 + + L++ G + V+ GNHD+ + R + V + A Sbjct: 61 GDWRDFSTGLFFLSQMARLERQGIRVAVVQGNHDAENRMT--RSLRWPPTVKVF-RSDRA 117 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 +P + F R AG Sbjct: 118 ETWIP---EGLEVAIHGRSFPRRDVTEDLSAGYPPPV----------------------- 151 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG 231 L I H G P DY ALGH+H I+ Sbjct: 152 ---AGLFNIGLLHTAADGRLGHTPYAPC------DVPTLVGKGYDYWALGHVHGRAILHE 202 Query: 232 MEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLAS--- 288 V + G+ +E G +K L+T G++ ++E L V + + L+ DL Sbjct: 203 RPWVVFPGNLQARHVNEPG-AKGATLLTIDGGEVTALEALAFDVLRWVR-LEVDLGGCAS 260 Query: 289 -------ITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRS 341 I L + ++ + + + ++ +HD+ T + + + Sbjct: 261 PQQAYGRIETALAEALTQAEGRALAVRLTLSGATAVHDLLAGDPERTTAECLALTERAGG 320 Query: 342 REQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTL 394 E+V + + +A ++ L+ L + Sbjct: 321 EVWLEKVAVATTPPRQDGAPAADELFAVIARILETPEERAVLRADLEQALTRV 373 >UniRef50_Q03Y84 DNA repair exonuclease n=3 Tax=Leuconostoc RepID=Q03Y84_LEUMM Length = 390 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 64/429 (14%), Positives = 126/429 (29%), Gaps = 70/429 (16%) Query: 1 MRILHTSDWHLGQNFYSKSRE----------AEHQAFLDWLLETAQTHQVDAIIVAGDVF 50 M+ +H D HLG F ++ + L++ A + +VD ++ GD++ Sbjct: 1 MKFIHAGDVHLGNPFSGLDKQLPFTLKKTVQTATIKAFEQLIDDAISAEVDFVLFPGDLY 60 Query: 51 DTGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGH 110 ++ + + + ++ L + + GNHD A + + N V Sbjct: 61 NSAENSPFIQEVVSKQFKRLSDVNIDVFLSFGNHDFEA--DTRNHLPWPNNIHVFHQ--E 116 Query: 111 APQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACK 170 + L + R + Sbjct: 117 VETKIKILHSGEKVALTGFSYQTQRQTEKIIDDFPSKGDTDYQ----------------- 159 Query: 171 LRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIG 230 I H D + + DY ALGHIH Q + Sbjct: 160 ---------IGLYHGAL--GVAGDPYAPFSLSDM------LQKNYDYWALGHIHIRQTLN 202 Query: 231 GMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASIT 290 + Y G L+ E G K +LV N +L P+ + + T Sbjct: 203 EQPFIGYSGVLQGLNRKETG-DKGYYLVHSENQRLIPEFKNIAPINWNSTTIS-SMTDET 260 Query: 291 AQLEQWRDVSQEPPVWLDIEITTDEYLHDIQR-----KIQALTESLPVEVLLVRRSREQR 345 ++Q + + + I IT I+R + + + LP + +VR S Sbjct: 261 DLIDQIISLKNDKITFWSITITAQIDATIIERINSGVTLDKIRDQLPTNMWVVRLSVANA 320 Query: 346 ERVLASQQ--RETLSELSVEEVFNR-------------RLALEELDESQQQRLQHLFTTT 390 ++ + ++++VF + + + Q+ LQ+ Sbjct: 321 GQLSLVSDNIDQQYWTGALDKVFEESNITDYLPSQVPVFIREHFMSDDGQEELQNAMEQL 380 Query: 391 LHTLAGEHE 399 + +E Sbjct: 381 IAERRQNNE 389 >UniRef50_C5RCI7 DNA repair exonuclease n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RCI7_WEIPA Length = 397 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 78/419 (18%), Positives = 132/419 (31%), Gaps = 61/419 (14%) Query: 1 MRILHTSDWHLGQNFYSKSREAE---------HQAFLDWLLETAQTHQVDAIIVAGDVFD 51 M+ +H D HLG F S + + + L++ A T VD +++AGD+FD Sbjct: 1 MKFIHAGDLHLGNPFGGLSMTPDWLTDQLQAATETAVHRLVDDAITAAVDFVVLAGDLFD 60 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA 111 T +P + A+ R + L + V GNHD V L+ R N T+ Sbjct: 61 TTTPDARAQLDLVRELERLATENIPVYVGFGNHDYV--LDWQRVPTFPKNVTLF--PKDV 116 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 + + + + A Q Sbjct: 117 TTYHMQTKNHESVAISGFSYTQRHITTDQVAEFPIKSTQDD------------------- 157 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG 231 I H + G S A DY ALGHIH + + Sbjct: 158 ------WHIGIYHGSM-GEVGSGNYAPF------NLQAMQQKHYDYWALGHIHVRETLQK 204 Query: 232 MEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITA 291 + Y GS L E G +K ++V +L P+T A ++ + ++ Sbjct: 205 KPFIGYSGSIQGLDKTETG-AKGYYMVESEGNELVPTFTPVAPITWVTAEVRTE-RDLST 262 Query: 292 QLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKI--QALTESLPVE--------VLLVRRS 341 ++ R + I + ++ I Q L + ++ Sbjct: 263 VVQYVRGQFAMKDEFELISLNLITEDPNVLSAIVNQQLLAQFVAAAQTTDMFFIYEIQAQ 322 Query: 342 REQRERVLASQQRETLSELSVEEVFNRR-LALEELDE-SQQQRLQHLFT-TTLHTLAGE 397 +++ L + SE ++ +VF R L L + + L H TL L Sbjct: 323 TQEQHLPLPAVDERYWSE-TIGDVFTREQLQKMGLKQVTDVDVLDHFLNAQTLQALQEA 380 >UniRef50_B9MRD8 Nuclease SbcCD, D subunit n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MRD8_ANATD Length = 420 Score = 184 bits (467), Expect = 4e-45, Method: Composition-based stats. Identities = 84/426 (19%), Positives = 161/426 (37%), Gaps = 37/426 (8%) Query: 1 MRILHTSDWHLGQNFYSK-------SREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTG 53 +R +HT+D H G YS+ SR + D +L+ + + +D +++ GD+F Sbjct: 3 IRGVHTADLHFGVTTYSRETPDGLGSRVHDFFKTFDRILQFIRDNSIDFLLITGDIFKDR 62 Query: 54 SPPSYARTLYNRFVVNLQQTGCHLVVLAGNHD--SVATLNESRDIMAFLNTTVVASAGHA 111 P S R ++ + +V++ + G ++++ GNHD T + S + + Sbjct: 63 EPNSTLRNMFYKRIVDISKEGVLVIIIPGNHDMHPFETKDHSVKVFEIFEQPNIVVMDKP 122 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 ++ + +P+L + +K + L +++++ + Sbjct: 123 FEVKEFEIRDEKLRIIAVPYLYLERFV----DETFPQKTEELDMIAANFFEKKLSQVLDS 178 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNF--PPADYIALGHIHRAQII 229 D +P I GH T V A + R I +G P P ++ALGHIH+ QI+ Sbjct: 179 SED-NIPTILAGHFTVVEAQI-GSERSIMLGKDIKVPLSCLLNPKLKFVALGHIHKPQIL 236 Query: 230 GGMEHVR-YCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLAS 288 YCGSP + F E SK + E V V +P L+ D+ Sbjct: 237 HAANPTVLYCGSPDRIDFSEANDSKGFVVFELDKDSF-RFEFQPVKV-RPFCQLEIDVFE 294 Query: 289 --ITAQLEQWRDVSQEPPVWLD------IEITTDEYLHDIQRKIQALTESLPVEVLLVRR 340 + ++ D +E + I+++ + + Q I+ + VE L R Sbjct: 295 DQVENLTKKILDKIEEKIQMFEQSTSSSIQVSVVKLIIKTQSLIKEKIDIGLVERFLRDR 354 Query: 341 SREQRERVLASQQRET------LSEL-SVEEVFNRRLALEE--LDESQQQRLQHLFTTTL 391 + + + E E F + L+ + D + ++ F L Sbjct: 355 CFVLAPIEIEVIDSKKDFRIAEVDEKSDPVEAFEKFLSASQKYRDVENKDKIVSEFKKLL 414 Query: 392 HTLAGE 397 H + + Sbjct: 415 HEIQEK 420 >UniRef50_B1HVJ9 Putative uncharacterized protein n=3 Tax=Bacteria RepID=B1HVJ9_LYSSC Length = 404 Score = 184 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 63/435 (14%), Positives = 127/435 (29%), Gaps = 81/435 (18%) Query: 1 MRILHTSDWHLGQNFYSKSREAEH---------QAFLDWLLETAQTHQVDAIIVAGDVFD 51 +R H +D HL F EH D +++ A Q D +++ GD++D Sbjct: 4 IRFFHMADLHLDSPFKGLFGLPEHILKEIRSSTFDAFDKIIQKAIQEQPDFLLIVGDIYD 63 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA 111 + A+ + + L Q +++ GNHD + N Sbjct: 64 GENRSLQAQRKFQDAMEKLFQHNIPVIISYGNHDHLK--GTWTRFSLPSNVY---ELPAE 118 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 ++ + + + + ++ D + Sbjct: 119 TSVVQLKIRGQQVCIYGFSYSE-------------------------RHLKESVIDTFPI 153 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG 231 D I H + + L Y ALGHIH+ Q++ Sbjct: 154 AQDSHAIHIGMLHGSEASDTSHALYAPFTKQQL------LEKNYHYWALGHIHKRQLLHE 207 Query: 232 MEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLA---- 287 + Y G+ E G K + VT S ++ + ++ D Sbjct: 208 NPPIVYPGNIQSRHRKEQGI-KGCYDVTLS-QTACELDFIPTSAIVY-TTIEVDCTNIVH 264 Query: 288 --SITAQLEQWRDVSQEPPVWLDIEI----------------TTDEYLHDIQRKIQALTE 329 + + E+ V++ +E+ T D +L I+ + + Sbjct: 265 ANELLKRCEEAIAVNRTSWGAAVVELYLKNIDEQTEALFEHATVDTWLDTIREAEEGIEP 324 Query: 330 SLPVEVLLVRRSREQRERVLASQQRETL-------SELSVEEVFNRRLAL----EELDES 378 V+ +++++ E A+Q +L + + + E L E Sbjct: 325 MCWVQKMVLQKPSIHGEYSAATQSVVSLMEQWDSNDWKDILKDLYQYAGGARLIEPLSEK 384 Query: 379 QQQRLQHLFTTTLHT 393 + L H + L Sbjct: 385 DIKNLTHNAQSLLAE 399 >UniRef50_B6AP26 DNA repair exonuclease n=1 Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6AP26_9BACT Length = 410 Score = 183 bits (465), Expect = 8e-45, Method: Composition-based stats. Identities = 71/418 (16%), Positives = 138/418 (33%), Gaps = 76/418 (18%) Query: 1 MRILHTSDWHLGQNFYSKSREA---------EHQAFLDWLLETAQTHQVDAIIVAGDVFD 51 M+ H SD HL + + + + L++ +V +++ GD+FD Sbjct: 1 MKFFHASDIHLDSLLRNLALDEPEQIGRIRHATRDAFGTLVDRCIEEKVSLLLLVGDLFD 60 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA 111 +P + L + G +V++ GNHD+ + D+ N V+ Sbjct: 61 RDNPNMQIVRFLRHELGRLDREGIRVVIVKGNHDADNRIGRFLDL--PSNAVVLDD---- 114 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 RP+ + G+ + Q +T+ Y Sbjct: 115 --------------------ARPQQLAFPDLGV-AVTGQSFSPGPVTENLALAYPPPL-- 151 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG 231 IA H + G ++ + + L A DY ALGHIH+ +I+ Sbjct: 152 ---PGFFNIALLHTSLSGYTEHEPYAPCSLNDLQA------RKYDYWALGHIHKREILSR 202 Query: 232 MEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQP---------MAVL 282 + Y G+ + E G K V ++ S++ + + V + + Sbjct: 203 DPAIIYPGNLQGRNAKETG-PKGAMCVEVEGNRIISLDFVPLDVVRWHSLQIDSTGIRET 261 Query: 283 KGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSR 342 ++ +LE+ +S P + + ++ L ++ R Sbjct: 262 AILAKTVRQKLEEVLQLSDGRPAAVRVTFSSRSSLTGS----------------VLDRPE 305 Query: 343 EQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHEA 400 R VL +L +L +E+V R+ + + RL F L + +A Sbjct: 306 SLRSWVLEVASELSLDDLWIEKV---RVERPQERDRPVSRLDSDFAAVLAEVLQNPDA 360 >UniRef50_Q8U1N9 DNA double-strand break repair protein mre11 n=4 Tax=Thermococcaceae RepID=MRE11_PYRFU Length = 426 Score = 183 bits (465), Expect = 8e-45, Method: Composition-based stats. Identities = 67/416 (16%), Positives = 123/416 (29%), Gaps = 50/416 (12%) Query: 1 MRILHTSDWHLGQ-NFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYA 59 M+ H +D HLG F+ RE E LE A VD I++AGD+F + P Sbjct: 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGT 60 Query: 60 RTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLN-TTVVASAGHAPQILPRR 118 + ++ + + GNHD +++ V+ + Sbjct: 61 LKKAIALLQIPKEHSIPVFAIEGNHDRTQRGPSVLNLLEDFGLVYVIGMRKEKVENEYLT 120 Query: 119 DGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLP 178 G + + + + H + ++ + + + K Sbjct: 121 SERLGNGEYLVKGVYK-------------DLEIHGMKYMSSAWFEANKEILKRLFRPTDN 167 Query: 179 IIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGME-HVRY 237 I H S++ IG Y ALGHIH+ V Y Sbjct: 168 AILMLHQGVREVSEARGEDYFEIG-----LGDLPEGYLYYALGHIHKRYETSYSGSPVVY 222 Query: 238 CGSPIPLSFDE---------------CGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVL 282 GS F + G +K ++V + ++ + + Sbjct: 223 PGSLERWDFGDYEVRYEWDGIKFKERYGVNKGFYIVEDFKPRFVEIKVRPFIDVK----I 278 Query: 283 KGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSR 342 KG I +++ + ++ + I + + + E L VE L + R Sbjct: 279 KGSEEEIRKAIKRLIPLIP-KNAYVRLNIGWRKPFD-----LTEIKELLNVEYLKIDTWR 332 Query: 343 EQRERVLASQQRETLSELSVEEVFNRRLAL--EELDESQQQRLQHLFTTTLHTLAG 396 + S + S+ F ++ E D + L T G Sbjct: 333 IKERTDEESGKIGLPSDF--FTEFELKIIDILGEKDFDDFDYIIKLITEGKVEEEG 386 >UniRef50_B4SA17 Metallophosphoesterase n=3 Tax=Bacteria RepID=B4SA17_PELPB Length = 419 Score = 183 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 69/410 (16%), Positives = 131/410 (31%), Gaps = 61/410 (14%) Query: 3 ILHTSDWHLGQNFYSKSREAEH---------QAFLDWLLETAQTHQVDAIIVAGDVFDTG 53 LH +D HL + + D L+E A +V +++AGD++D Sbjct: 4 FLHAADIHLDSPLKGLEAYQDAPLEQIRLAARRAFDNLVELALDEKVAFVLLAGDLYDGD 63 Query: 54 SPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ 113 + + L+ G +++++GNHD+ + R + N T+ Sbjct: 64 WKDYNTGLYFVNRMGRLRDAGIPVIMVSGNHDAARQIT--RSLKLPDNVTLFPH------ 115 Query: 114 ILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRG 173 R + I Q ++ D +++ G Sbjct: 116 -------------------RSVGTLLLDHYGVAIHGQSFSSRSVMDDLVRNFPQ-----G 151 Query: 174 DQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGME 233 D L I H + G + A Y ALGHIH+ + I Sbjct: 152 DPALFTIGLLHTSLNGRPGHEPYAPCT------LDALRSKGYHYWALGHIHQREEICRDP 205 Query: 234 HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQ----PMAVLKGDLAS- 288 V + G+ E G K LV+ G++ SVE + V + + + D A Sbjct: 206 WVVFSGNIQGRHIRETG-PKGCTLVSVDEGRVVSVEERELDVLRWALCRVDSARCDTADS 264 Query: 289 ----ITAQLEQWRDVSQEPPVWLDIEITT----DEYLHDIQRKIQALTESLPVEVLLVRR 340 + E+ R + P+ + + + LH+ + ++ V Sbjct: 265 LCDLVREAFEEERVKAYGRPLAVRLIVEGITALHGELHEDALQWSEEFRAVAASFGDVWI 324 Query: 341 SREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTT 390 + + + + R ++ S E + + + +ES L F Sbjct: 325 EKIIIKSLKGAGPRVQGADDSPVEALLQSVEELQFEESTFVGLVPEFEKL 374 >UniRef50_C2EVZ4 DNA repair exonuclease n=1 Tax=Lactobacillus vaginalis ATCC 49540 RepID=C2EVZ4_9LACO Length = 401 Score = 183 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 59/354 (16%), Positives = 112/354 (31%), Gaps = 51/354 (14%) Query: 1 MRILHTSDWHLGQNFYSKSREAEH---------QAFLDWLLETAQTHQVDAIIVAGDVFD 51 M+ +HT+D HL F + +++ A QVD I++ GD++D Sbjct: 1 MKFIHTADLHLDSPFRGLDEMPAQIWQRVHQSTFTAFERIVDAAINQQVDFILIVGDIYD 60 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA 111 + A + R L + + + GNHD + + N V + Sbjct: 61 RDHHSAEAEDFFVRQCQRLAKQQIPVYLSYGNHDYQPVTEQIDSL--PNNVHVFGNQVET 118 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 + D T + + + + + E + + Q+ D Sbjct: 119 KTLTLADDQT--VAITGFSYGKRWLVEDQVSKFPEKETADWQIGMLHGAISQNNPDQ--- 173 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG 231 D P DY ALGHIH+ Q++ Sbjct: 174 ----------------------DHYAPFT------LPELLQKRYDYWALGHIHKHQVLNE 205 Query: 232 MEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQ-PMAVLKGDLASIT 290 V Y G+P +E G+ +LV ++ KL + P+ + ++ Sbjct: 206 EPLVVYPGNPQGRHKNEDGQ-HGYYLVQSNSDKLTAEFKPVAPIEWCEIDAHLTHDQTVD 264 Query: 291 AQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQ 344 + +E + + I + ++ ALT+ L ++ R +E Sbjct: 265 SLIEMLLHKGEAEDGFKMIAFNV-----HLTDQVNALTKKLLANGTILERLQEN 313 >UniRef50_D1A2M1 Metallophosphoesterase n=2 Tax=Streptosporangineae RepID=D1A2M1_THECD Length = 411 Score = 183 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 64/342 (18%), Positives = 117/342 (34%), Gaps = 56/342 (16%) Query: 1 MRILHTSDWHLGQNFYSK---------SREAEHQAFLDWLLETAQTHQVDAIIVAGDVFD 51 M++LH +D H+ + L+ L+E A+ VDA+++AGD++D Sbjct: 1 MKLLHAADLHIDSPLRGLASYEGAPAQELRTASRRALENLVELARAEDVDAVLLAGDIYD 60 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA 111 + R + L + G + +++GNHD+ +++ R + N V Sbjct: 61 GDWLDYQTGLFFARQMSALGKAGIDVYLISGNHDAQSSIT--RRLRLPGNVRVF----DT 114 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 Q RD G + F R + D Y Sbjct: 115 AQPQTFRDERLGLAVHGQGFAR---------------------REVKDNLAVRYPAPL-- 151 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG 231 L + H G + +G L A Y ALGH+H +++ Sbjct: 152 ---SGLFNVGLLHTALTGREGHEEYAPCKVGELQA------KGYQYWALGHVHTREVVCE 202 Query: 232 MEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITA 291 + + G+ E G K LVT + ++ VE+ ++ V + L+ D+ Sbjct: 203 DPWIVFPGNIQGRHARETG-PKGCTLVTVDDLQVTGVEHRDLDVAR-WEHLRVDVTGAED 260 Query: 292 QLE-------QWRDVSQEPPVWLDIEITTDEYLHDIQRKIQA 326 E + RD+ E + + +T H + + Sbjct: 261 LDEAATLVAKRLRDLPAERLHAVRVSLTGRTPAHLELNRERE 302 >UniRef50_A0AKX5 Complete genome n=19 Tax=Listeria RepID=A0AKX5_LISW6 Length = 411 Score = 182 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 74/441 (16%), Positives = 140/441 (31%), Gaps = 80/441 (18%) Query: 1 MRILHTSDWHLGQNFYSKS---------REAEHQAFLDWLLETAQTHQVDAIIVAGDVFD 51 ++ LH +D HL F S + L+ ++ A +VD +++AGD++D Sbjct: 4 IKFLHIADLHLDSPFIGLSTLPQPLYSAVQESTFLSLERIITLAIKEKVDFVLIAGDIYD 63 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA 111 + A+ + + + L+ V+ GNHD + ++ N V Sbjct: 64 SEDQSVRAQARFLKEMKRLEDANIRAFVIHGNHDFIEK--HKEKLLLPDNVYVF--PEQV 119 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 + + + + A N ++ Sbjct: 120 EMATLETNQGVKVHIYGFSYGERHMRTSRVAEYNVQQEAD-------------------- 159 Query: 172 RGDQPLPIIATGHLT-TVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIG 230 IA H + + + D I + DY ALGHIH+ Q++ Sbjct: 160 ------FHIALLHGSELTSSEEHDVYAPFQIQEI------IKKGFDYWALGHIHKRQLLT 207 Query: 231 GMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQP--MAVLKGD--- 285 + Y G+ + E G K +VT S P+ + + D Sbjct: 208 ESPSIYYPGNIQGRNRKESG-EKGASIVTMSETTTTIDFIATSPIIWEEVILTIPEDSEV 266 Query: 286 ---LASITAQLEQWRDVSQEPPVWLDIE------ITTDEYLHDIQRKIQA------LTES 330 IT L ++ + + + I+ I T+++L +Q ++ Sbjct: 267 NTFYREITKLLNDYQGRNNSFFLHVIIQMTNKQKINTNDWLQMLQEEVDLTSSTFVWVHK 326 Query: 331 LPVEVLLVRRSREQRERVLASQQRET-LSELSVEEVFNRRLA-----------LEELDES 378 L +E+ + +E LA ++ L E F + + LE+L E Sbjct: 327 LSIELTNQSDLKNWQEHHLAGREIMNAFKTLQDEFAFYKSVESLYFESGVSRYLEDLSEQ 386 Query: 379 QQQR-LQHLFTTTLHTLAGEH 398 +Q L+ T L Sbjct: 387 DRQLMLESALTELGVALKESE 407 >UniRef50_C8P9D8 Ser/Thr protein phosphatase n=1 Tax=Lactobacillus antri DSM 16041 RepID=C8P9D8_9LACO Length = 402 Score = 182 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 51/301 (16%), Positives = 91/301 (30%), Gaps = 48/301 (15%) Query: 1 MRILHTSDWHLGQNFYSKSR---------EAEHQAFLDWLLETAQTHQVDAIIVAGDVFD 51 ++ +HT+D HL F ++ +++ A +VD +++ GD++D Sbjct: 2 VKFIHTADLHLASPFQGLTKVPGQLWQRVYDSTFVAFQKIVDAAIDERVDFVVITGDIYD 61 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA 111 A +N + L + + GNHD ++ + NT V + A Sbjct: 62 GERKSIAAVNFFNEQLGRLADRQIPVFLCYGNHDFQPVTATNQSL--PANTHVFGNQ-VA 118 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 DG+ + + I + Y Sbjct: 119 TVDFKLTDGSR-VAVTGFSYG---------------------QRWIEQDVAKQYP----- 151 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG 231 I H A + + L++ DY ALGHIH+ Q + Sbjct: 152 IKGPVDWQIGLLHGAPYQAGADNHYAPFTVAELES------KHYDYWALGHIHKHQQLAA 205 Query: 232 MEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITA 291 + Y G P +E G S +LV +L + + +L Sbjct: 206 APPIVYSGIPQGRHKNEAG-SHGYYLVHSQGSRLVPEFKPVAGIGW--RTVNVNLDDCQN 262 Query: 292 Q 292 Q Sbjct: 263 Q 263 >UniRef50_A9H1V1 Putative metallophosphoesterase n=1 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9H1V1_GLUDA Length = 415 Score = 182 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 69/403 (17%), Positives = 132/403 (32%), Gaps = 60/403 (14%) Query: 5 HTSDWHLGQNFYSKSREA---------EHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSP 55 H +D HL SR +A D L++ A +VD +++AGD+FD Sbjct: 2 HAADIHLDSPLRGLSRYEGLPEEDIRGATRAAFDNLVQRALDEEVDFVVIAGDLFDGDWK 61 Query: 56 PSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQIL 115 + R + L Q + +L+GNHD+ + L R I N + + A +L Sbjct: 62 DMGTGLYFARAMGRLAQADVPVFLLSGNHDAESVLT--RSIPWPDNVKLFGTRRPATHVL 119 Query: 116 PRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQ 175 P + F P A+TD Y A + Sbjct: 120 PEF----AVAVHGQSFATP---------------------AVTDNLVLAYPGAV-----E 149 Query: 176 PLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHV 235 I H G A + L + DY ALGH+H +++ +V Sbjct: 150 HHFNIGVLHTALAGRQGHAAYAPCSLDDLRS------KHYDYWALGHVHEHEVVAEDPYV 203 Query: 236 RYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQ--- 292 + G+ + E G K +VT + ++ ++E++ + V + A ++ D A Sbjct: 204 VFPGNTQGRTIRETG-PKGAVIVTVEDAQIVTIEHVELDVLR-WAHVEVDCTGAAADAVA 261 Query: 293 -------LEQWRDVSQEPPVWLDIEITTDEYLHDIQRK-IQALTESLPVEVLLVRRSREQ 344 L W+ + P+ + +T + + ++ ++ + Sbjct: 262 SLMRASLLSTWQADAAGLPLVARVSLTGETADAGALHDGVSSIRDAARAVAASISPDLFI 321 Query: 345 RERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLF 387 + ++ + + + + D L Sbjct: 322 ERVKVLVGPPAQPQQIRIGDDLSSLIGQAATDPELAALLAEDL 364 >UniRef50_A8TGF4 Metallophosphoesterase n=1 Tax=Methanococcus voltae A3 RepID=A8TGF4_METVO Length = 391 Score = 182 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 66/417 (15%), Positives = 136/417 (32%), Gaps = 66/417 (15%) Query: 1 MRILHTSDWHLGQNFYSKS-REAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYA 59 MR +H +D HL Y RE + + ++ + D ++ +GD+FD +P A Sbjct: 1 MRFVHIADTHLSNRQYGLDEREKDIYNSFNQCIDKIIELEPDFVVHSGDLFDRSNPSINA 60 Query: 60 RTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 + L++ + + GNHD +++ + + + + Sbjct: 61 MLTAIKGFEKLKEHKIPIYAIQGNHDMPRDISKGKPFVVLKRV--LGNEFFKTFGKENCH 118 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 +C + + I + ++ + D Sbjct: 119 NIGDISVCGFDY-----------------YPVNKKPVIDEKLEEIEQKINLNQNDGVKKS 161 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIG--------- 230 I H G D + ++ IG + P DYIA GHIH+ ++ Sbjct: 162 ILLMHQGFNGFLPLDELCEVGIGDI--------PEVDYIACGHIHKRSLVSYDEDSNHKF 213 Query: 231 --GMEHVRYCGSPIPLSFDE----CGKSKYVHLVTFS--NGKLESVENLNVPVTQPMAVL 282 + Y GS LS E K + V F + ++E +N+ + + Sbjct: 214 KTKSPLLAYSGSTDSLSEKEYYDYEKNGKGFYYVDFDNCDLDKNNIEKINIKC-RKFEKI 272 Query: 283 KGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSR 342 + Q++ + + + I + ++ ++A + LVR+S Sbjct: 273 -----DVDNQID-YNTLVNNLKSYDSKPIAIGKVCEELYEPLKAKLNEHTLFYRLVRKSV 326 Query: 343 EQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHE 399 E ++E S+++VF + + LD + + + E E Sbjct: 327 E-------EIDITNVNETSIKQVFEDYVYSKGLD-------VNFVENVHNKINSEEE 369 >UniRef50_Q04FF3 DNA repair exonuclease n=2 Tax=Oenococcus oeni RepID=Q04FF3_OENOB Length = 413 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 66/410 (16%), Positives = 129/410 (31%), Gaps = 60/410 (14%) Query: 1 MRILHTSDWHLGQNFYSKSR------------EAEHQAFLDWLLETAQTHQVDAIIVAGD 48 M+ +H +D HLG R +++ A VD ++ GD Sbjct: 10 MKFIHAADIHLGNPISGIDRKINLPEEVKKQIALATFTAFSNVIKLAVDRHVDFVLFPGD 69 Query: 49 VFDTGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASA 108 +FD+ +Y N+ NL++ G + GNHD + + D + N + Sbjct: 70 LFDSSQQSAYLYNFLNQQFQNLKEAGIEAFISFGNHDFQSDVE--NDFIWPENVHAFPKS 127 Query: 109 GHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADA 168 DG + F + ++ Sbjct: 128 KAKTFFHDSWDGKR-VAITGTSF-------------------------VVRNPRESLVPL 161 Query: 169 CKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQI 228 R I H + G S ++ +G L A DY ALGHIH Q+ Sbjct: 162 YPSRDQSATYQIGMYHGS-QGNSSANNYAPFSVGDLQAL------NYDYWALGHIHVRQV 214 Query: 229 IGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLAS 288 + + Y G P L E G+ + ++ + E + + + Sbjct: 215 LSKNPAIVYSGDPQGLDLTETGEKGVYFVSDENDQGGLTAEFVPCSSFV-FDSFELSIND 273 Query: 289 ------ITAQL-EQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRS 341 I+ + ++ + + I + L + + LT++ ++++ + Sbjct: 274 QSAISNISDLIVQELLSFNHKKMSLNAIRVNLSASLPEKI--LDQLTDTSFLDLVNSKTI 331 Query: 342 REQRERVLASQQRETLSE--LSVEEVFNRRLALEELDESQ-QQRLQHLFT 388 RE++ + + + +EE + + + DE Q L F Sbjct: 332 REKQFLIKMDLNVDQKKDNFNQLEERYWQAAKNDVFDEQSFNQALLRTFN 381 >UniRef50_A7HVL9 Metallophosphoesterase n=3 Tax=Proteobacteria RepID=A7HVL9_PARL1 Length = 423 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 74/421 (17%), Positives = 125/421 (29%), Gaps = 65/421 (15%) Query: 2 RILHTSDWHLGQNFYSKSREA---------EHQAFLDWLLETAQTHQVDAIIVAGDVFDT 52 R LH +D HL + + + LD L+ A +V+ +++AGD++D Sbjct: 5 RFLHAADIHLDSPLRGLAGQEGAAVARVRTATRDALDTLVGLAIEEEVNFLVIAGDLYDG 64 Query: 53 GSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP 112 + + L + G + +L GNHD+ + + R + N V S Sbjct: 65 DWRDYKTGLFFAAQMGRLNKEGIPVYLLHGNHDAESQIT--RRLDLPDNVHVFGS----- 117 Query: 113 QILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLR 172 R + + Q IT +Y Sbjct: 118 --------------------RKPETFALDKLKVALHGQSFRQRDITHNLVPNYPGPV--- 154 Query: 173 GDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGM 232 + I H G + I L DY ALGH+H+A ++ Sbjct: 155 --SGVFNIGVLHTGLGGMGGHENYAPCAIEDLTN------KGYDYWALGHVHQAGVLREK 206 Query: 233 EHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLAS---- 288 HV + G+ E G +K L T +G + + + V + AVL LA Sbjct: 207 PHVVFPGNLQGRHARETG-AKGASLATVEDGDIVELATVPCDVVR-WAVLPVSLADAERF 264 Query: 289 ------ITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQ-----RKIQALTESLPVEVLL 337 I +E + + I + +HD R + Sbjct: 265 GEVIDRIHDAVETAVTEADGRLLACRIVLQGRTAVHDQLIASEDRMLAEARAGALGLGDE 324 Query: 338 VRRSREQRERVLASQQRETL-SELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAG 396 V + ETL R L D++ +++ + L Sbjct: 325 VAWVEKVVINTRPEVDAETLAKREDAIGELQRLLQEATRDDALLAQIEDDIGKLVRQLPH 384 Query: 397 E 397 E Sbjct: 385 E 385 >UniRef50_A8FBK1 Putative uncharacterized protein yhaO n=1 Tax=Bacillus pumilus SAFR-032 RepID=A8FBK1_BACP2 Length = 404 Score = 181 bits (458), Expect = 5e-44, Method: Composition-based stats. Identities = 71/397 (17%), Positives = 131/397 (32%), Gaps = 50/397 (12%) Query: 3 ILHTSDWHLGQNFYSKS---------REAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTG 53 +H +D HL F S + + + A VD ++++GD+FD Sbjct: 6 FIHAADLHLDSPFVGMSNIPSLPFKRLKESTFQSAKNIFDLAVERAVDFVLLSGDLFDES 65 Query: 54 SPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ 113 + A+ V LQ G + ++ GNHD + E I N V S + Sbjct: 66 NRSLKAQLFLRNQFVRLQTHGIEVFIIYGNHDHLG--GEWTPIEWPENVQVFTS-STPSE 122 Query: 114 ILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRG 173 + R A + + K++ + +T +Y + A Sbjct: 123 LSYYRGDQLVASIYGFSY-----------------KERAVYENMTFHYVKTTDAAY---- 161 Query: 174 DQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGME 233 IA H T G DA + L DY ALGHIH+ ++ Sbjct: 162 -----HIAMLHGTLAGQEGHDAYAPFQLQQLIT------RDFDYWALGHIHKRALLHEDP 210 Query: 234 HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPM---AVLKGDLASIT 290 ++ Y G+ E G+ + + + + + + + + + Sbjct: 211 YIIYPGNVQGRHIKETGEKGCYLIQLSEDSRAADFISCADIIFEKLAIDITETAHMTDLV 270 Query: 291 AQLEQWRDVSQEP--PVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERV 348 +E + +E P ++ IE+T D + +++AL E + V V Sbjct: 271 ILVESKINELKEDGIPHFVRIELTGDAPSYLEHTQLEALEELMTVFHEQEEDEDVFVW-V 329 Query: 349 LASQQRETLSELSVEEVFNRRLALEELDESQQQRLQH 385 ++ R + E+ F + L E + L Sbjct: 330 MSIDCRTNEEVIYPEDSFLKELTAEIAQFESYEELLS 366 >UniRef50_C0GNG3 Metallophosphoesterase n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GNG3_9DELT Length = 423 Score = 181 bits (458), Expect = 5e-44, Method: Composition-based stats. Identities = 66/419 (15%), Positives = 129/419 (30%), Gaps = 64/419 (15%) Query: 3 ILHTSDWHLGQNFYSKSREA---------EHQAFLDWLLETAQTHQVDAIIVAGDVFDTG 53 +H +D HL + SR + LD L+ H++ +++AGD++D Sbjct: 4 FIHAADIHLDSPLHGLSRYEGAPAREIRQATRKALDNLVNYVLEHRIPLLLIAGDLYDGD 63 Query: 54 SPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ 113 P ++ + L++ G + ++ GNHD+ + + + N ++ Sbjct: 64 CPDFQTPLHFSAQMSRLREAGTRVALIRGNHDAQNRMT--KSLRLPDNVFTFSA------ 115 Query: 114 ILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRG 173 RP G + Q + A+ + +Y D Sbjct: 116 ------------------ARPATWKLEDLG-TAVHGQSYDREAVLENLALNYPDPV---- 152 Query: 174 DQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGME 233 + I H + G + + L DY ALGHIHR +I+ Sbjct: 153 -PGMFNIGLLHTSLSGTPEHSGYAPCTLNQL------LAKGYDYWALGHIHRHEILHRDP 205 Query: 234 HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVL--------KGD 285 V + G E G K V ++E + + V + + +G Sbjct: 206 PVIFSGCIQGRHIREPG-GKGCMRVDVDPSGRINIERVELDVLRWQHMELDVSGLKTRGA 264 Query: 286 LASITAQLEQWRDVSQEPPVWLDIEIT---TDEYLHDIQRKIQALTESLPVEVLL----- 337 + + ++ + +++ L + +T T DI L + Sbjct: 265 VLDLVSRELENISAARDSEKLLGLRLTLKGTTGAFSDIMHDFAGLQAEIRNLATDISGQT 324 Query: 338 VRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAG 396 + + + A E + + + E D + L T L G Sbjct: 325 IWVEKIFNQCTPALDWEEIKASGTALAHLAGYMQALEQDPELFKSLDLDLTELRAKLGG 383 >UniRef50_A3ZTZ5 Putative exonuclease n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZTZ5_9PLAN Length = 419 Score = 181 bits (458), Expect = 6e-44, Method: Composition-based stats. Identities = 73/424 (17%), Positives = 129/424 (30%), Gaps = 79/424 (18%) Query: 2 RILHTSDWHLGQNFYSKSREA---------EHQAFLDWLLETAQTHQVDAIIVAGDVFDT 52 R +H +D H+ R + + L++ A +V +++AGD+FD Sbjct: 4 RFIHAADLHIDSPLQGLGRIDPAMMQRVQLATRTAFEKLVDLAVREEVAFLLIAGDLFDG 63 Query: 53 GSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP 112 L G + + GNHD+ + L + I N + ++ Sbjct: 64 QWQDMRTGQWTIAQFRRLDAHGIRVFYIRGNHDAESKL--QKSIRWPDNVSELSVKQAET 121 Query: 113 QILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLR 172 L + F RP + + Y A Sbjct: 122 ITLDE----VKVAIHGRGFARP---------------------DVLEDLAAAYPAAI--- 153 Query: 173 GDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRA--QIIG 230 I H + G + D I TL DY ALGHIH Q + Sbjct: 154 --PGHFNIGMLHTSLQGYDEHDPYAPTTIDTLRG------KGYDYWALGHIHLREAQALC 205 Query: 231 GMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDL---- 286 +V Y G+ E G +K + + ++G+LE V V + + L+ L Sbjct: 206 EHPYVAYSGNTQGRHIREQG-AKGCLVASVADGQLEEVRFEPTDVLR-WSELEIVLAADA 263 Query: 287 ------ASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQR----------KIQALTES 330 I L + ++ + +T LH +++ Sbjct: 264 DAQQLDEQIRDALSAAHEKNEGRFTVARVRLTGRCQLHAELNDPLKQGDWIGRVRDAAAV 323 Query: 331 LPVEVLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDES----QQQRLQHL 386 + E+ + + + R A + + E + +R +AL D L+ L Sbjct: 324 ISDELCIEKV----KIRTSAQRSERSRGEADLLGELSREVALLREDPEALAGLSPELKSL 379 Query: 387 FTTT 390 F Sbjct: 380 FDKL 383 >UniRef50_B6WPR2 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WPR2_9DELT Length = 423 Score = 181 bits (458), Expect = 6e-44, Method: Composition-based stats. Identities = 79/426 (18%), Positives = 135/426 (31%), Gaps = 79/426 (18%) Query: 2 RILHTSDWHLGQNFYSKSR-----------EAEHQAFLDWLLETAQTHQVDAIIVAGDVF 50 R +H +D HL F SR L L + + + D +++AGD++ Sbjct: 5 RYIHAADLHLDTPFLGLSRTDAGEALQAQLRDATFTALQRLFDLCERLRPDFLVLAGDIY 64 Query: 51 DTGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGH 110 + A+ + LQ G + GNHD + + + + N T+ Sbjct: 65 NQEEHSVKAQLALRDGCLRLQACGIPVFWAHGNHDPLD--SRLKTVDWPDNVTIFGP--E 120 Query: 111 APQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACK 170 Q + RDG P AV+ I R R+ ++ A Sbjct: 121 PEQHVLCRDGAPLAVIHGISHARIRE-------------------------ARNLALLFH 155 Query: 171 LRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIG 230 + D + H + G+ D + L A D ALGH+H +I+ Sbjct: 156 RQPDAACFQLGVLHCSVEGSPSQDRYAPCSLDDLRA------AGLDAWALGHVHEHRILA 209 Query: 231 GMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLE---SVENLNVPVTQPMAVLKG--- 284 + Y G+ L +E G + LVT E L + Q ++ G Sbjct: 210 RSPFIAYPGNTQGLHINE-GGPRGCLLVTAEACDGTFSCREEFLPLGPVQWQRLVIGLDA 268 Query: 285 --DLASITAQLEQWRDVSQEPPVW------LDIEITTDEYLH----------DIQRKIQA 326 L ++ +L + + E + + + L D++ ++ Sbjct: 269 VEQLDAVEDRLLEALTTATEAADASCTLMVVRLCLQGRTPLDSLLRRPETCRDLRERLHQ 328 Query: 327 LTESLPVEVLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHL 386 + LPV + + + A QR+ L L L E E Q L Sbjct: 329 ASLPLPVHIKDLSVETAPAVDMAACLQRQDL--------LGEALRLAEGLERQPDALAAF 380 Query: 387 FTTTLH 392 L Sbjct: 381 AEEELA 386 >UniRef50_Q39WB4 Metallophosphoesterase n=2 Tax=Geobacter RepID=Q39WB4_GEOMG Length = 376 Score = 180 bits (457), Expect = 7e-44, Method: Composition-based stats. Identities = 68/403 (16%), Positives = 123/403 (30%), Gaps = 44/403 (10%) Query: 1 MRILHTSDWHLGQNFYS-----KSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSP 55 +RILHT+D HLG + + + R + D ++ A +VD ++VAGD+FD Sbjct: 3 IRILHTADLHLGSSLKNFGELARERRRDFLKTFDRIVNLAIKREVDCLLVAGDLFDATQV 62 Query: 56 PSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQIL 115 + L G +V++ G HD+V + + F ++ Sbjct: 63 DAETVGRVQDGFERLSGRGISVVLIPGTHDNVVSAESVYNRTTFAGAHILKDP-VVTDPF 121 Query: 116 PRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQ 175 + R ++ R + Sbjct: 122 ALEIRGATVHFYGFAYRSDRSREALESM---------------------------RRREG 154 Query: 176 PLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHV 235 + H + G+ + + + T A DYIALGH H + V Sbjct: 155 GGIHVGLLHGSLKGSPEWEMRKKDIPFTTAELAAL---GLDYIALGHYHNVGCLEDQGRV 211 Query: 236 --RYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQL 293 Y GSP F E G+ V +V G + + L L Sbjct: 212 VACYPGSPEGKKFGENGERH-VLIVEVGEGSAVVEKVPVQSRIMDELTVDASLFPEAGAL 270 Query: 294 EQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQ 353 E P + I + + + + L+ + + + Sbjct: 271 EGELARLASPDLIARIRLAGTVEDPLDIANLAGRLQGTYAWLELLDETEIYNSDHVKRME 330 Query: 354 RETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAG 396 RE S+ +F R++ ++++ + Q L L + G Sbjct: 331 RED----SIRGLFIRKVHAR-FEKAESEAEQELCRDALKLVMG 368 >UniRef50_Q21A38 Metallophosphoesterase n=4 Tax=Bradyrhizobiaceae RepID=Q21A38_RHOPB Length = 408 Score = 180 bits (457), Expect = 7e-44, Method: Composition-based stats. Identities = 83/426 (19%), Positives = 143/426 (33%), Gaps = 70/426 (16%) Query: 1 MRI--LHTSDWHLGQNFYSKSREA---------EHQAFLDWLLETAQTHQVDAIIVAGDV 49 MR +H +D H+ S + + ++ L+E + +I+AGDV Sbjct: 1 MRFSFIHAADLHIDSPLAGLSLKDQAVAARFAQAGRRAVEALIEQTIASKAAFLIIAGDV 60 Query: 50 FDTGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAG 109 FD + R V L + G +V++ GNHD+ + ++ RD+ + TV S Sbjct: 61 FDGDWKDVSTGLFFVRAVSALDRAGIPVVMVKGNHDAASVMS--RDLPYPDSVTVFGSGK 118 Query: 110 HAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADAC 169 + L L F + + ++ Sbjct: 119 ASTVTLEAH----RVALHGRSF--------------------------PNRLTADFVESY 148 Query: 170 KLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQII 229 R D I H + G + + L F DY ALGH+H A+I+ Sbjct: 149 PPRRD-GWLNIGVLHTSLDGTRGHEGYAPCSVDDLKRF------GYDYWALGHVHAAEIV 201 Query: 230 GGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASI 289 + Y G+ S E G +K VT +G++ V L + + A L D+A I Sbjct: 202 SRDPWIVYPGNLQGRSVRETG-AKGAVRVTVEDGRIVEVTPLALDGAR-WAQLTLDVAGI 259 Query: 290 ----------TAQLEQWRDVSQEPPVWLDIEITTDEYLHD--------IQRKIQALTESL 331 A L + S+ P+ I +T LH+ +Q +++A+ L Sbjct: 260 SSEDEMLARCRAALADAQAQSEGRPLAARITLTGATSLHNHLVARRETLQDELRAIGFQL 319 Query: 332 PVEVLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTL 391 E + + VL L V+++ + E + + Sbjct: 320 GAECWVEQLKVRTSLPVLTGAAMSAADALDVDQLLREAASDPEFATVLAELTDTIKAKLP 379 Query: 392 HTLAGE 397 L E Sbjct: 380 KDLHDE 385 >UniRef50_A4XJU8 Nuclease SbcCD, D subunit n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XJU8_CALS8 Length = 419 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 84/430 (19%), Positives = 153/430 (35%), Gaps = 46/430 (10%) Query: 1 MRILHTSDWHLGQNFYSK-------SREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTG 53 +R +HT+D H G YSK SR + D +LE + + +D +++ GD+F Sbjct: 3 IRGVHTADLHFGVTTYSKETPDGLGSRVHDFFRTFDRILEYIRQNHIDLLLITGDIFKDR 62 Query: 54 SPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRD-----IMAFLNTTVVASA 108 P S R ++ + VV + + G +V++ GNHD + I N V+ Sbjct: 63 EPNSTLRNMFYKRVVEIAKEGILVVIVPGNHDMHPFEAKHHSVKVFEIFEQENIVVMDKL 122 Query: 109 GHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADA 168 + + +P+L EK + + I +++++ A+ Sbjct: 123 ---FETKVFDIKGERLRVIAVPYLYLERF----IDKTIPEKIEQIEQNIANFFEERLAEI 175 Query: 169 CKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNF--PPADYIALGHIHRA 226 D +P I GH T A + R I +G P P ++ALGHIH+ Sbjct: 176 LDSCED-DIPTILAGHFTVNEAEV-GSERMIMVGKDVKVPLSVLLHPKLRFVALGHIHKP 233 Query: 227 QIIGGMEH-VRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGD 285 QI+ + + YCGSP + F E K + E V V +P L+ D Sbjct: 234 QILNSKDPAIVYCGSPDRIDFSEAQDQKGFVVFEIEKENFW-FEFKPV-VVRPFYQLEID 291 Query: 286 LASITAQLEQWR--------------DVSQEPPVWLDIEITTDEYLHDIQR--KIQALTE 329 L +E+ + + + I T L + K++ + Sbjct: 292 LYEANGDVEKILISEIDKKIKSLEENSSANVKASVVKLIIRTQSLLKERLNLTKVEEYLK 351 Query: 330 SLPVEVLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEE--LDESQQQRLQHLF 387 + + + ++ + + S+ F R L+ D + + F Sbjct: 352 DMCFILAPIEIEVTDAKKDFRIIEVDEKSD--PILAFERFLSASPKYKDIKNKNEVVATF 409 Query: 388 TTTLHTLAGE 397 + + Sbjct: 410 KSLFEEAQSD 419 >UniRef50_B8DIF5 Metallophosphoesterase n=4 Tax=Desulfovibrio vulgaris RepID=B8DIF5_DESVM Length = 513 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 62/294 (21%), Positives = 95/294 (32%), Gaps = 29/294 (9%) Query: 2 RILHTSDWHLGQNFYSKSR----------EAEHQAFLDWLLETAQTHQVDAIIVAGDVFD 51 R +H +D HL F SR + L++ + DA+++AGDV + Sbjct: 5 RFVHAADLHLDAAFAGVSRDLSPRLADRLHRATFTAWERLVDLCLAERPDALLIAGDVHN 64 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA 111 A+ L G + + GNHD + + + TV + Sbjct: 65 HEDGSLRAQVALRDGCARLADAGVRVFIAHGNHDPLT--SRVHSLHWPDGVTVFGPQVES 122 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 + RDG AV+ I R+ Q ++ + + Sbjct: 123 HALT--RDGRVVAVVHGISHETDREGRNLAKRFARAATVQGMVHGLVQ----------DV 170 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG 231 P I H + TLD DY ALGHIH Q++ Sbjct: 171 DVPPGAPQIGVLHCNVGSTPGTRDAGRYAPCTLDDLTG---AGLDYWALGHIHLPQVLRT 227 Query: 232 MEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNV-PVTQPMAVLKG 284 HV Y GS L +E G + HLVT + E + PV + + Sbjct: 228 RPHVVYPGSTQGLHINEDG-PRGCHLVTVHDDGEVETEFRPLAPVRWQVVEVPI 280 >UniRef50_C7QAP2 Metallophosphoesterase n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QAP2_CATAD Length = 425 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 59/343 (17%), Positives = 114/343 (33%), Gaps = 57/343 (16%) Query: 2 RILHTSDWHLGQNFYSKSREAE---------HQAFLDWLLETAQTHQVDAIIVAGDVFDT 52 ++LH +D H+ + + + + + L+ A QVDA+++AGDV+D Sbjct: 11 KLLHAADLHIDSPLHGLEKYPDAPVDMIRAASRRATENLVALALDEQVDAVLLAGDVYDG 70 Query: 53 GSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP 112 + R + L G + +++GNHD+ + + +++ N + Sbjct: 71 DWRGYDTGLFFQRQLGILGDAGIQVYLVSGNHDAQSQIT--KNLRLPNNVHKFDTHQSQ- 127 Query: 113 QILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLR 172 D G V+ + R + + Y A Sbjct: 128 ---SIEDPDVGLVVHGQGYAR---------------------RDVMENLAADYPRAM--- 160 Query: 173 GDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGM 232 + + H G + + L Y ALGH+H +++ Sbjct: 161 --PGMFNVGLLHTALTGRAGHTKYAPCSVEEL------VSRGYGYWALGHVHTREVVFEE 212 Query: 233 EHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQP--MAVLKGDLASIT 290 H+ + G+ S E G K LVT ++ +VE+ ++ V + + V + Sbjct: 213 PHIVFPGNIQGRSIRETG-PKGCTLVTVTDKGSVAVEHRDLDVVRWAHLRVDATSADDLD 271 Query: 291 A-------QLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQA 326 QL RD S V + +T H + + Sbjct: 272 DVCELVRTQLATERDRSDGRLVAARVTVTGRSAAHAELWRERE 314 >UniRef50_C0Z548 Putative exonuclease sbcCD subunit D n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z548_BREBN Length = 334 Score = 179 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 80/336 (23%), Positives = 140/336 (41%), Gaps = 33/336 (9%) Query: 79 VLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDGTP---------------- 122 ++AGNHD + + + ++ AP + Sbjct: 1 MIAGNHDQPERVRAAAPLATKHGIVLLGLPKEAPLLTQEASADRVQIVQGGPSWLEMKIP 60 Query: 123 ----GAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLP 178 A++ +P+ + L+ Q+ + A ++ Q AD + Sbjct: 61 GCAANAIILALPYPSESRLKEL---LSESFTQEQMQLAFSERIAQLLADLSVHFRE-DTV 116 Query: 179 IIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFP-PADYIALGHIHRAQIIGGMEHVRY 237 + T HL +G ++D+ R I IG Q FP ADY+ALGH+HR Q + VRY Sbjct: 117 NLVTSHLFVMGGKETDSERPIQIGGALTVSPQAFPKNADYVALGHLHRLQKLSDKPLVRY 176 Query: 238 CGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWR 297 GSPI SF E G+SK V LV G+ E + + +P+A + Q+E+W Sbjct: 177 SGSPISYSFSEAGQSKAVVLVEVEPGQEVREEIIYLTSARPLARWRAT--EGIEQVERWL 234 Query: 298 DVSQEPPVWLDIEITTDEYLHDIQ-RKIQALTESLPVEVLLVRRSREQRERVLASQQRET 356 + ++ W+D+E+ + + ++++ L++ L ++R + ER +QR Sbjct: 235 EEGRDAGAWIDLELHVSGVIDPAEFQRVRKLSDDF----LKIQRVVVREEREEEEEQRVE 290 Query: 357 LSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLH 392 L+ELS +++F R ++L LF L Sbjct: 291 LTELSSDQLFKRFYERRR-GAEPDEQLVALFQRLLA 325 >UniRef50_UPI0001850B9E hypothetical protein Bcoam_05235 n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI0001850B9E Length = 395 Score = 177 bits (448), Expect = 8e-43, Method: Composition-based stats. Identities = 64/393 (16%), Positives = 120/393 (30%), Gaps = 48/393 (12%) Query: 1 MRILHTSDWHLGQNFYSKS---------REAEHQAFLDWLLETAQTHQVDAIIVAGDVFD 51 +R +H +D HL F + + ++ A QVD I ++GD+FD Sbjct: 2 IRFIHCADLHLDSPFIGLTGIPSKVFDRIHQSTFLSFERIISIAIDKQVDFICISGDLFD 61 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA 111 A+ + + L G +L GNHD ++ + + N TV Sbjct: 62 GEDRSIKAQVRLQKQLNRLHHAGIPCFILHGNHDHLS--GKWVTLELPENVTVFK--EDV 117 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 + + + + + + Sbjct: 118 EGKSFFSKSGERVTISGFSYGTRQVFDRKINDYPVAKGEGY------------------- 158 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG 231 I H +KS T++ DY ALGHIH+ QI+ Sbjct: 159 -------HIGMLHG--SEGTKSGEHIPYAPFTIEEL---LGKKMDYWALGHIHKRQILHE 206 Query: 232 MEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLA-SIT 290 ++ Y G+ S E G K +LV ++ E+ + ++ + ++T Sbjct: 207 DPYIVYPGNIQGRSMKESG-EKGCYLVEMNSVSTEATFYSTNAILFEKISVEVSESLTLT 265 Query: 291 AQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLA 350 + + + + E + D+ +Q E + + E V Sbjct: 266 ELINKLEEWKNRRRQEQRSNLIEFELVGDLSPSLQRSLEEIVETLQDREEEEEYFVWVTG 325 Query: 351 SQQRETLSELSVEEV--FNRRLALEELDESQQQ 381 + +E S++ L ELD+ Q Sbjct: 326 ITYSQAKNESSLQAYHPLLTLLKNWELDDVHQA 358 >UniRef50_D0BLI1 DNA repair exonuclease n=1 Tax=Granulicatella elegans ATCC 700633 RepID=D0BLI1_9LACT Length = 404 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 69/413 (16%), Positives = 135/413 (32%), Gaps = 65/413 (15%) Query: 1 MRILHTSDWHLGQNFYSKSR---------EAEHQAFLDWLLETAQTHQVDAIIVAGDVFD 51 +R +H +D HLG F + + L++TA + VD ++++GD+FD Sbjct: 2 IRFIHCADIHLGSPFTGLQQKNSTIAFQAIEATKKAFLTLIDTAIKYHVDFVLISGDIFD 61 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA 111 + + L Q G + ++ GNHD + + V Sbjct: 62 SNHQHIQEKIFLKEQFQRLAQAGIYTYLIHGNHDYGGFTEDWNN----DWVKVFK--EEV 115 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 + + + + IT+ H+ + Sbjct: 116 STEILKTSSGESIAISGFSY---------------------DTRWITESMAIHFP----M 150 Query: 172 RGDQPLPIIATGH-LTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIG 230 R I H T + S A I L+ DY ALGHIHRA + Sbjct: 151 RNSVVDFHIGMYHGQTRTASDSSAAYAPFKISDLEKLY------YDYWALGHIHRAMDLD 204 Query: 231 GMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASIT 290 + Y G+ +F E G K +++T + + + ++ ++ + + Sbjct: 205 SNGRIAYSGTIQGRNFKEMG-EKGFYVITLTKNLPMNRQFVSCNPI-EWVEIEFLVEEVH 262 Query: 291 AQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLA 350 + + + + +I I K + + ++ L ++ + Sbjct: 263 SIEQTVSQL------YREILIQKWNVDKTYLLKFVLIVDRGFNQIWLKLIEEILQKEISM 316 Query: 351 SQQRETLSELSVEEVFNRRLALE-----ELDESQQQRLQHLFTTTLHTLAGEH 398 ++ L E+ VE R+L EL E ++ L L + +A +H Sbjct: 317 KYEKLYLIEMDVE---FRKLKRNNQLSIELLEDEESHLNRL--QDIQNIAMQH 364 >UniRef50_Q0TNF1 Ser/Thr protein phosphatase family protein n=9 Tax=Clostridium perfringens RepID=Q0TNF1_CLOP1 Length = 379 Score = 176 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 74/414 (17%), Positives = 134/414 (32%), Gaps = 60/414 (14%) Query: 1 MRILHTSDWHLGQNFY------SKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGS 54 ++ILH SD H F R AE + ++ +VD +++AGD+FD + Sbjct: 4 VKILHCSDIHFDTPFKELPKEIGTMRRAELRESFSKIINRGIDEKVDLVLLAGDLFDNDT 63 Query: 55 PPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQI 114 T + L++ + + AGNHD + + N + +I Sbjct: 64 IEKSTLTFIKDQIDKLKKHNIRVFISAGNHDPYNKKSFYNMVNLGENVHIF-----KDEI 118 Query: 115 LPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGD 174 V+ F ++ E D Sbjct: 119 ERIEIPELNTVVYGASFKEKYIKESNLKDFTPKE------------------------ED 154 Query: 175 QPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIG--GM 232 + L I H G +++ + ++ DYIALGHIH+ I G Sbjct: 155 KDLVKIMVLHGDL-GNNETGEYNPLLFKEIEE------SKMDYIALGHIHKFSGIKRIGN 207 Query: 233 EHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMA------VLKGDL 286 + Y G P FDE G K + L S G + ++ + + K Sbjct: 208 TYYAYSGCPEGRGFDEEG-DKGIILGEVSLG-VVDLDFIKTNKREYFLKEIDISNCKTKE 265 Query: 287 ASITAQLEQWRDVSQEPPVW-LDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQR 345 I L S+E ++ + ++ +E I+ L +V +R Sbjct: 266 EVIDKILNTISKESREKNLFKIILKGNIEESFKIDSDLIENLIRDKFFYCKIVNSTR--- 322 Query: 346 ERVLASQQRETLSELSVEEVFNRRLALE-ELDESQQQRLQHLFTTTLHTLAGEH 398 + E +E S++ +F + E +E ++ L F + ++ Sbjct: 323 ---IKIDIDEMSNEYSIKGIFCSLIKDALESNEEDEEILDIAFRIGMESILDGE 373 >UniRef50_C4FW95 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FW95_9FIRM Length = 426 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 52/311 (16%), Positives = 98/311 (31%), Gaps = 53/311 (17%) Query: 1 MRILHTSDWHLGQNFYSKS---------REAEHQAFLDWLLETAQTHQVDAIIVAGDVFD 51 M++LH +D HL F + + + A VD +++AGD++D Sbjct: 1 MKLLHIADLHLDSPFTGLTKQLHSLQKHLIQSPYQAFERCVSIAINQAVDLMVIAGDIYD 60 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA 111 T A+ + + + L +V+ GNHD + E + + N + Sbjct: 61 TEQQTVTAQHFFLKQLERLHIAKIPVVLCHGNHDYLRM--ECQSVPYPDNVHLFKDQEVT 118 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 +P D + + + D+ + Sbjct: 119 AIDIPLADDQT-VRCYGFSYTK-------------------------RWVDARMIDSYPV 152 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG 231 + + H G D + +L DY ALGHIH+AQ++ Sbjct: 153 NPHETTYTLGVLH----GQESGDHYAPFDLESL------LSKNYDYWALGHIHQAQVLKE 202 Query: 232 MEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNV-PVTQPMAVLK----GDL 286 ++Y G+ E G K +V + +++ P+ A L+ Sbjct: 203 QPLIQYPGTIQGRHRKELG-DKGAFIVELKPQTPAKSQFISLAPIVWQEAHLECRSNWHE 261 Query: 287 ASITAQLEQWR 297 + LE + Sbjct: 262 LDLVQALEGIQ 272 >UniRef50_D1YYH3 Putative DNA double-strand break repair protein Mre11 n=1 Tax=Methanocella paludicola SANAE RepID=D1YYH3_METPS Length = 446 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 74/425 (17%), Positives = 130/425 (30%), Gaps = 54/425 (12%) Query: 1 MRILHTSDWHLGQNFYSKS-REAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYA 59 M +H +D HLG Y R + ++E A +V+ ++++GD+FD S + Sbjct: 1 MNFIHMADMHLGYRQYGLEERFLDFGYTFKQVVEYAIAQKVEFVLISGDLFDKRSINAPT 60 Query: 60 RTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 + L+ G + + GNHD L + + L +++ D Sbjct: 61 YIQAVHVLSLLKNAGIPCIAIEGNHDR-RFLKDGMSWLDSL------EWEGLLKVIKNYD 113 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 G F+ G G + + A P Sbjct: 114 GDLMG-----GFVDAGKTRIFGLGFAGSMTSAAIPRIKEEI-------AAINAQSPPERT 161 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPP-ADYIALGHIHRAQIIGGMEHVRYC 238 I H G K +G + DY+ALGH H I + Sbjct: 162 IFMLHAGVQGKMKYG-----VVGEVTYEDLCQLKGAVDYLALGHYHSNYEID--DWAYNP 214 Query: 239 GSPIPLSFDECGKSKYVHLV-TFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWR 297 GSP S E + K ++ V + +P+ KG + + E Sbjct: 215 GSPDTCSIVEAYEKKGIYHVTDVGAKLVPMSTRKFIPLRIKADGHKGFESLLNDIRESLI 274 Query: 298 DVSQEPPVWLDIEITT----DEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQ 353 + + + I D+ ++ ++A+ E VR E +AS Sbjct: 275 KYGKYDGPIVHVIIEGTLGFDKSHINVDTILEAVKEITSALYADVRFDLVNDEFRIASID 334 Query: 354 RETLSELSVE-EVFNR--------------------RLALEELDESQQQRLQHLFTTTLH 392 + L S+E EVF + + + + ++ L LF H Sbjct: 335 ADALDRASIEREVFRKLARFDSVLAGNCDFFAASLSEVKDMAVKGADEKTLDSLFRKIYH 394 Query: 393 TLAGE 397 + Sbjct: 395 EVKNA 399 >UniRef50_B9JD37 Serine/threonine-specific protein phosphatase protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JD37_AGRRK Length = 414 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 63/413 (15%), Positives = 130/413 (31%), Gaps = 66/413 (15%) Query: 3 ILHTSDWHLGQNFYSKSRE---------AEHQAFLDWLLETAQTHQVDAIIVAGDVFDTG 53 +H +D HLG F + + + L+ A +VD ++AGDV+D Sbjct: 9 FIHAADLHLGSPFQGLALKDAAIASIFVEASRKAFSTLVGLAIEKRVDFFLIAGDVYDGD 68 Query: 54 SPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ 113 + +NR + L++ G + +L GNHD+ + + + I N Sbjct: 69 WKDNKIGLFFNREMARLERAGIPVYLLRGNHDAASVIT--KTITLPANVHEF-------- 118 Query: 114 ILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRG 173 P +P + +A + Q + D +Y Sbjct: 119 ----------------PTSKPGSVK-LEALRVALHGQGFAERSANDNLAINYPAPV---- 157 Query: 174 DQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGME 233 I H + G + L + DY ALGH+H +++ Sbjct: 158 -SGWFNIGVLHTSLTGREPHAPYAPCSVDDLRS------RGYDYWALGHVHDYEVVATDP 210 Query: 234 HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLAS----- 288 V + G+ S E G +K LVT +G++ + + D Sbjct: 211 LVIFPGNLQGRSIRERG-AKGAVLVTVEDGRISHERLIVDEARFAQVDITVDPEDDQAAI 269 Query: 289 ---ITAQLEQWRDVSQEPPVWLDIEITTDEYLHDI--------QRKIQALTESLPVEVLL 337 + ++ D L + ++ L + +++A + ++ L Sbjct: 270 LRHVEQAVQLLADEMAGRMTALRVRLSGITPLQGAIAANRQQWRDEVEAACHRVHEDIWL 329 Query: 338 VRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTT 390 + E R ++ E L + ++ + ++ + + + Sbjct: 330 EKL--ELRLEAPSAAAVEANGTLDLGQLLSEHAGDADIVAEASRLVGEIAVRL 380 >UniRef50_C6JB59 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JB59_9FIRM Length = 1275 Score = 175 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 73/422 (17%), Positives = 147/422 (34%), Gaps = 47/422 (11%) Query: 1 MRILHTSDWHLGQNFYSKS------REAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGS 54 M+ILHT+DWH+G F R + L+++++ A+ + D + V+GDVF Sbjct: 1 MKILHTADWHIG-QFKGPVVDGVNLRSQDTVNCLNYMIKVAEEEKPDIVCVSGDVFHQEQ 59 Query: 55 PPS----YARTLYNRFVVNLQQTGCHLVVLAG--NHDSVATLNESRDIMAF-LNTTVVAS 107 + + L ++V+ G NHD + A N +V S Sbjct: 60 IGPVRYSDEMIVATDTITKLAGVAKAVIVMRGTPNHDGGGQFRVLSKMFANTGNVHIVTS 119 Query: 108 AGHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYAD 167 TP A + IP ++ + GL+ E+ + + I+ A+ Sbjct: 120 PTVL--------RTPYADIACIPGFDKQEFRSRFPGLSADEENEAWTSYISSMVMGLRAE 171 Query: 168 ACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADY--IALGHIHR 225 I H T G + + P + A Y + LGHIHR Sbjct: 172 C-------HNTSILMAHYTVPGCNMESGQTSFFTNFEPVIPREALEAAGYEAVLLGHIHR 224 Query: 226 AQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGD 285 QI+ G+ +V Y G+ ++F++ G+ + + FS+ + + + + + D Sbjct: 225 PQILNGLHNVFYSGAINAMNFNDEGQERGFWIHEFSDTGKLTKGHNCITPYRRFYTITWD 284 Query: 286 LASITAQLEQ---------WRDVSQEPPVWLDIEITTD-EYLHDIQRKIQALTESLPVEV 335 + A + + + + + V + T++ + +I + L E V Sbjct: 285 TEEVEAYIREGVMYLHRLGFPEDVTDKIVRVRYSCTSEQKKQLNIPALQKDLYELGAFYV 344 Query: 336 LLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLA 395 + E+ L++++ + ++ L + Sbjct: 345 ADIEAENAIDVTNRGLLSEESDPTLNLKKYLEEKCFKNP------DKIVELAEPIIAEAM 398 Query: 396 GE 397 + Sbjct: 399 KQ 400 >UniRef50_B5IR16 Ser/Thr protein phosphatase family protein n=1 Tax=Thermococcus barophilus MP RepID=B5IR16_9EURY Length = 380 Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats. Identities = 81/387 (20%), Positives = 133/387 (34%), Gaps = 50/387 (12%) Query: 1 MRILHTSDWHLGQNFYSKS-REAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYA 59 MRI H SD HLG Y+ RE + + ++ +VD +I AGD FDT PP A Sbjct: 1 MRIAHISDTHLGYRQYNLDERENDIYDAFNEAIDIIIEERVDVVIHAGDFFDTPRPPIKA 60 Query: 60 RTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRD 119 + + L + G ++ + G HD+ Sbjct: 61 LYVAKEAIKRLHENGVKILTVLGEHDTPKRRAM--------------------------- 93 Query: 120 GTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPI 179 P L IP L ++ + G ++ D +Q + ++ Sbjct: 94 --PPHKLLDIPILGIGEVNVVEVNGVGFFGISNMKGKRVDLLKQELSK-VDALANRYSKA 150 Query: 180 IATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRA-QIIGGMEHVRYC 238 + H + ++ +G L DY A GHIHR G ++ Y Sbjct: 151 VLIAHQGIKKYLPFEGAYELELGDL-------PKEIDYYAFGHIHRRTFEKFGRGYLAYS 203 Query: 239 GSPIPLSFDE----CGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGD----LASIT 290 GS LS E K +++V G L V +++ +P L + + Sbjct: 204 GSIEILSRSEITDWKRDGKGIYIVDLE-GDLPEVHKISLQQIRPQFELSYSEGDVIEELK 262 Query: 291 AQLEQWRDVSQEPPVWLDIEITTDE-YLHDIQRKIQ-ALTESLPVEVLLVRRSREQRERV 348 A L + L I I+ + +I K+Q L + +P +VL + Sbjct: 263 AFLYNLLKNPLDKSPILRINISGEGIRKPEILEKVQYLLRKMVPEKVLRYDVHFVGSDAP 322 Query: 349 LASQQRETLSELSVEEVFNRRLALEEL 375 + E + +EE+F L E L Sbjct: 323 ITITAEELGKIVDLEELFIEYLGDETL 349 >UniRef50_Q8CUG3 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8CUG3_OCEIH Length = 402 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 62/403 (15%), Positives = 131/403 (32%), Gaps = 56/403 (13%) Query: 3 ILHTSDWHLGQNFYSK---------SREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTG 53 +H +D HL F + LD L+E A H+VD +++ GD++D Sbjct: 7 FIHAADLHLDSPFKGLQNIPEEIFQEIQESTFTTLDNLIEQAIIHKVDFLLLVGDLYDND 66 Query: 54 SPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQ 113 + A+ L++ + + GNHD + S + N + S Sbjct: 67 NQSLKAQVRLRNAFQKLKEYHIQVFLSYGNHDYLN--ERSLSVQFPSNVHMFTSEK---- 120 Query: 114 ILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRG 173 + PF + ++ + G + + H + + + Sbjct: 121 ------------VSYFPFNKNKETLAHIYGFSYESRAVHDSKVLD----------YQRKN 158 Query: 174 DQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGME 233 +Q I H + ++ D +I L DY ALGHIH+ +++ Sbjct: 159 EQIPYHIGLLHGSITTNTEHDMYAPFHIEELKNTH------MDYWALGHIHKREVLSDAP 212 Query: 234 HVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQ- 292 + Y G+ E G K V + + + + + ++ DL+ + Sbjct: 213 PIIYPGNIQGRHRKEIG-EKGCFFVEMNE-FEVQKQFIPLESIR-FEQVELDLSGVEFLH 269 Query: 293 ------LEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRE 346 L+ + + L I+++ +Y + +I+ + + + Sbjct: 270 NIESLVLQSLPQLKNPGLIELIIKLSEQQYESWERSRIEEWIDIINEITITQSPWIYIYR 329 Query: 347 RVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTT 389 + +R E S F + + + Q + L+ Sbjct: 330 TSIQIPKRLEFEENSP---FFAMINKQIEEVPIQPIVDELYQN 369 >UniRef50_C9AYT5 Metallophosphoesterase n=4 Tax=Enterococcus RepID=C9AYT5_ENTCA Length = 406 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 64/414 (15%), Positives = 123/414 (29%), Gaps = 55/414 (13%) Query: 1 MRILHTSDWHLGQNFYSKSREAE---------HQAFLDWLLETAQTHQVDAIIVAGDVFD 51 MR LH++D H+ ++F +E +Q + L++ A VD +++AGD F Sbjct: 11 MRFLHSADLHIDRSFEGVHLLSEKVKTQLPAINQKIIRNLVDVALEKAVDFVLLAGDTFH 70 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA 111 P + + + L + + ++ GNHD N + +S Sbjct: 71 QARPSLKVQHDFFAQLQRLGEAQIPVYMIFGNHDYYDPQRYW--FAFPENVILFSSEEVQ 128 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 ++G A + + P + + + A DY Sbjct: 129 TVQGTTKNGETYA-ISGFSYQHP--------WITENKVTEFPARAAVDY----------- 168 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG 231 I H G + I + DY LGHIH + + Sbjct: 169 -------HIGLYH----GDQAGERYAPFSISEMKQ------KGYDYWGLGHIHVPKTLSE 211 Query: 232 MEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQP-----MAVLKGDL 286 + Y G+P + E + V L + + +A + Sbjct: 212 QPPILYPGTPQGKTKKEQ--ATGVILADLTPQGPTIERLEIAEIAWQKQVVSLADVTASN 269 Query: 287 ASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRE 346 A + A +E+ + + ++ + L + + Sbjct: 270 AVLPAIIERLKSPRSRLLHLVLTDVQQLPPDWFPAAEKNEWLTYLNERLAQTEPLQVIYA 329 Query: 347 RVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHEA 400 + + ++ E+ + LA+ E E RL L L HE+ Sbjct: 330 LEVEQANEDKIALAVSEDYMLQFLAMYESPEMFADRLSDLLQHPLIQRGITHES 383 >UniRef50_A5F9P1 SbcCD related DNA repair protein n=2 Tax=Clostridium kluyveri RepID=A5F9P1_CLOK5 Length = 1258 Score = 173 bits (439), Expect = 7e-42, Method: Composition-based stats. Identities = 69/411 (16%), Positives = 141/411 (34%), Gaps = 29/411 (7%) Query: 1 MRILHTSDWHLGQNFYSK-----SREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGS- 54 M+I H SD HLG+ R + +D+ Q D I++ GD+F Sbjct: 1 MKIAHISDIHLGEFPGPIVDGMNGRMKDIVTCMDYASNKLIEEQPDIILIVGDLFHRAKS 60 Query: 55 PPSYARTLYNRF---VVNLQQTGCHLVVLA-GNHDSVATLNESRDIMAFLNTTVVASAGH 110 A + + L +++ GNHD++ RD M N T++ Sbjct: 61 WGDEALKEISIASVWLRRLASIAPTVLLYGTGNHDNLNYFKNIRD-MGIENLTIIT---- 115 Query: 111 APQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACK 170 P + + +P + T G++ ++ + + A+ + ADA Sbjct: 116 EPDFFTINTQSGDIQIAAVPGMDKGFFRTLYPGMDFTDENKAISEALGNVIVGISADA-- 173 Query: 171 LRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNF--PPADYIALGHIHRAQI 228 + +P + H T G + +++ + P + + LGHIHRAQ Sbjct: 174 ---EPNIPCVLMSHYTVTGCQLENGE-SVFLNSDVVLPTAALQASNYNLVCLGHIHRAQE 229 Query: 229 IGGMEH-VRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLA 287 + Y G ++F+E G+ K + + P + K Sbjct: 230 VPNCGRPTFYSGPLNGITFNEEGQDKGFWIHECVGEFGVFSKFFKTPS-REFLTFKWVQQ 288 Query: 288 SITAQLEQ---WRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQ 344 + ++ D+ + + + D+ + + + + V+ R Sbjct: 289 HLDFYMKNGIPKGDIENIKDKIVRVIYSCDDETNKQFNRKELEKQLYAAGAFYVQEIRPS 348 Query: 345 RERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLA 395 + +Q + ++ SV L EE+ E+ + + L ++ +A Sbjct: 349 KILTTTDKQSMSEND-SVMHNLKDYLKREEVPENDIKDILALAEPLINEIA 398 >UniRef50_B1XWG2 Metallophosphoesterase n=21 Tax=Betaproteobacteria RepID=B1XWG2_LEPCP Length = 430 Score = 173 bits (439), Expect = 8e-42, Method: Composition-based stats. Identities = 73/418 (17%), Positives = 128/418 (30%), Gaps = 67/418 (16%) Query: 1 MRILHTSDWHLGQNFYSK---------SREAEHQAFLDWLLETAQTHQVDAIIVAGDVFD 51 +R +H +D HL + + D L+ A QVD +++AGD++D Sbjct: 12 VRFIHAADIHLDSPLVGLAAYQDAPVETLRTATRDAFDNLVGEAIAEQVDFMVIAGDLYD 71 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA 111 G + + L+ G + +L GNHD+ + ++ + N A Sbjct: 72 GGWKDFNTGIFFVAQMGRLKAAGIPVYLLLGNHDAES--EMTKRLALPDNVHRFPVGKAA 129 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 LP L F AA T+ Y D Sbjct: 130 TFRLPE----LRVALHGRSFKE---------------------AATTENLALTYPDPV-- 162 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIG- 230 I H G S I L A Y ALGH+H ++ Sbjct: 163 ---PGWLNIGVLHTALEGNSAHANYAPCSIAELAA------RGYQYWALGHVHEHRVWQE 213 Query: 231 GMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASIT 290 G + + G+ E G + +V ++ SVE L+V V + L+ D+A Sbjct: 214 GASTIAFPGNLQGRHIRETG-PRGALMVATDGAEIVSVERLHVDVLR-WHALEVDVAQAL 271 Query: 291 AQLEQ-----------WRDVSQEPPVWLDIEITTDEYLH------DIQRKIQALTESLPV 333 E + + P+ + + +T H + Q + + + ++ V Sbjct: 272 DLEEAVRMAGRRLAALIEETEGDLPLIVRVRLTGATPAHGQLFGLEAQLRAEIVAQAASV 331 Query: 334 EVLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTL 391 + + + E + LA + D + LQ + Sbjct: 332 STGRLWIEKIKVETTPHDPAAQVAQRSDAVADLQAHLAQADADPEFLKSLQDDLLQLI 389 >UniRef50_A0LDI1 Metallophosphoesterase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LDI1_MAGSM Length = 404 Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 68/380 (17%), Positives = 124/380 (32%), Gaps = 61/380 (16%) Query: 3 ILHTSDWHLGQNFYSKS-----------REAEHQAFLDWLLETAQTHQVDAIIVAGDVFD 51 +H +D HL E + + L++ A + QV + VAGD++D Sbjct: 5 FIHCADIHLDSPMQGLDAALRKKLPPNLLENLTRNAWNRLVDEAISKQVAFVAVAGDLYD 64 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA 111 L Q L++L GNHD+ + L + + N T++ H Sbjct: 65 GDWKDYRTGHFLAGSAKRLHQANIPLIILLGNHDAQSKLT--KKLSMPPNVTILDH--HK 120 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 PQ + D + + P AI++ HY A Sbjct: 121 PQTILLHD--LHTAIHGWSYPHP---------------------AISENMVIHYPPA--- 154 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG 231 + H G D ++ L DY LGH HR + + Sbjct: 155 --HPEYFNVGLLHTAMDGREGHDPYAPCHLNDLLTL------NYDYWGLGHAHRFEQLNQ 206 Query: 232 MEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQP----MAVLKGDLA 287 + Y G+ E G +K L+ + + + V + +A+ + D + Sbjct: 207 TPPICYSGNLQGRHIRETG-TKGYLLLQVDKQTVTEITHCPVHTLRWEQCTIALTEQDES 265 Query: 288 SITAQLE-QWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLL------VRR 340 S + Q + + P + + + L + ++ A E+ E+ V+ Sbjct: 266 SWLKAIRHQLQQLDPNQPTLVRLTLQGHSPLFRDRDRLYAECEAAAQEIHDQLWIEQVKM 325 Query: 341 SREQRERVLASQQRETLSEL 360 S+ + + L + TL L Sbjct: 326 SKTTQPQPLGTDSGHTLLNL 345 >UniRef50_B8ET59 Metallophosphoesterase n=1 Tax=Methylocella silvestris BL2 RepID=B8ET59_METSB Length = 412 Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 63/371 (16%), Positives = 119/371 (32%), Gaps = 65/371 (17%) Query: 2 RILHTSDWHLGQNFYSKSR---------EAEHQAFLDWLLETAQTHQVDAIIVAGDVFDT 52 R +H +D HL S+ E + D L+ A I++AGD+FD Sbjct: 4 RFIHAADLHLDSPLLGLSQKSPEFAARVEHASRQAFDNLVSLAIDEDCKLIVIAGDLFDG 63 Query: 53 GSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP 112 + + L++ G +V++ GNHD+ + N T++ S Sbjct: 64 NWRDYRTGQFFVDRMRPLRERGVRIVMILGNHDAANPFAG--RLELSDNVTLLPSN---- 117 Query: 113 QILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLR 172 + G + F R + + Sbjct: 118 RPHTIEIDEIGVAVHGRSFPRREVLENIALDYP--------------------------K 151 Query: 173 GDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGM 232 I H G D + L DY ALGHIH +++ Sbjct: 152 PLPGRFNIGLLHTAGTGREGHDNYAPCSVEQLAN------HGYDYWALGHIHAREVLSTA 205 Query: 233 EHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQ-PMAVLKGD------ 285 + + G+ S E G +K LVT + ++ ++E+ + V + + + Sbjct: 206 PPIVFSGNLQGRSIKETG-AKGATLVTVDHHEIVALEHRPLDVVRFGVESIDVSGLTDRD 264 Query: 286 --LASITAQLEQWRDVSQEPPVWLDIEITTDEYLHD--------IQRKIQALTESLPVEV 335 A+I A+ E ++ + L + + LH I+ +++ L S+ ++ Sbjct: 265 ALFAAIRARAESAYGAAEGRALALRVALYGQGLLHAEIAAKAQPIREEVETLFASIAADL 324 Query: 336 LLVRRSREQRE 346 L + Sbjct: 325 WLEKLVDRTEP 335 >UniRef50_Q38Y02 Putative metallo-phosphoesterase n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Q38Y02_LACSS Length = 397 Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 63/351 (17%), Positives = 104/351 (29%), Gaps = 47/351 (13%) Query: 1 MRILHTSDWHLGQNFYSKSRE---------AEHQAFLDWLLETAQTHQVDAIIVAGDVFD 51 M+ +H +D H+ F + + L++TA VD +++ GD FD Sbjct: 1 MKFIHAADAHIDSPFVGLKKASTNLWTTIHESTFTAFEKLVQTAIDEAVDFVLLVGDSFD 60 Query: 52 TGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHA 111 + + + L + + GNHD D N V + A Sbjct: 61 QEAQSLQVQNFLKQQFERLNAVEIPVYLSYGNHDYWDANQIHFDF--PKNVHVFTTDVEA 118 Query: 112 PQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKL 171 + + + Q L + Q A T Y Sbjct: 119 KTLTT--KAQETVTIVGFSY--------GQRWLAADQTAQFPPRAATTYT---------- 158 Query: 172 RGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGG 231 I T H + AS +D + L+ DY ALGHIH+ QI+ Sbjct: 159 --------IGTLHGSQSTASDADHYAPFTLSELNQL------QYDYWALGHIHKRQILQA 204 Query: 232 MEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITA 291 +V Y G+ +E G K +LVT G+ E + + Sbjct: 205 RPYVVYPGNLQGRHKNEPG-EKGFYLVTAQAGQFELEFKPTTVIEWQRQRFEIPENPSLN 263 Query: 292 QLEQ-WRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRS 341 QL++ R + + + IQ + + L Sbjct: 264 QLQEDLRTQLLQSETASLVALELTHAERLSSDLIQRVNNGELLAYLQTDLE 314 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.310 0.127 0.337 Lambda K H 0.267 0.0390 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,746,096,407 Number of Sequences: 3077464 Number of extensions: 61940566 Number of successful extensions: 280830 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 1274 Number of HSP's successfully gapped in prelim test: 3305 Number of HSP's that attempted gapping in prelim test: 266449 Number of HSP's gapped (non-prelim): 7184 length of query: 400 length of database: 1,040,396,356 effective HSP length: 131 effective length of query: 269 effective length of database: 637,248,572 effective search space: 171419865868 effective search space used: 171419865868 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 94 (40.9 bits)